SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47462 47489 chr2L 52566 52594 jockey 11 5105 2.0 6.0 4.0 2.2 5132 chr2L 47462 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52594 intron Cda5 - chr2L_11_50001 chr2L_50001 RAL-367 2 chr2L 89714 89748 chr2L 89791 89825 8 77 2.5 2.0 2.2 2.5 111 chr2L 89714 intergenic not near genes chr2L 89770 intergenic not near genes chr2L 89825 intergenic not near genes chr2L_8_85001 chr2L_85001 RAL-367 3 chr2L 179457 179483 chr2L 179540 179566 5 83 2.0 2.5 2.2 1.6 109 chr2L 179457 intron spen + chr2L 179512 intron spen + chr2L 179566 intron spen + chr2L_5_175001 chr2L_175001 RAL-367 4 chr2L 263312 263330 chr2L 263458 263476 6 146 2.0 2.0 2.0 2.0 164 chr2L 263312 intron,3` UTR CG3645 -,CG17075 - chr2L 263394 intron,3` UTR CG3645 -,CG17075 - chr2L 263476 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 RAL-367 5 chr2L 297694 297715 chr2L 297794 297815 10 100 1.5 5.0 3.2 2.4 121 chr2L 297694 intergenic Pi3K21B +,Hop + chr2L 297754 intergenic Pi3K21B +,Hop + chr2L 297815 intergenic Pi3K21B +,Hop + chr2L_10_295001 chr2L_295001 RAL-367 6 chr2L 314125 314158 chr2L 314202 314235 7 77 3.0 6.0 4.5 1.3 110 chr2L 314125 intron Plc21C + chr2L 314180 intron Plc21C + chr2L 314235 intron Plc21C + chr2L_7_310001 chr2L_310001 RAL-367 7 chr2L 323453 323483 chr2L 323531 323554 10 76 4.5 5.0 4.8 1.7 101 chr2L 323453 intron Plc21C + chr2L 323504 intron Plc21C + chr2L 323554 intron Plc21C + chr2L_10_320001 chr2L_320001 RAL-367 8 chr2L 325143 325157 chr2L 325210 325219 4 70 7.0 5.0 6.0 0.6 76 chr2L 325143 intron Plc21C + chr2L 325181 intron Plc21C + chr2L 325219 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-367 9 chr2L 686927 686949 chr2L 695966 695988 roo 5 9040 4.5 1.0 2.8 1.3 9061 chr2L 686927 intron ds - chr2L 691458 intron ds - chr2L 695988 intron ds - chr2L_5_690001 chr2L_690001 RAL-367 10 chr2L 770467 770483 chr2L 772248 772264 Bari1 9 1781 3.5 1.5 2.5 2.6 1797 chr2L 770467 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772264 intergenic CR44614 + chr2L_9_770001 chr2L_770001 RAL-367 11 chr2L 798883 798889 chr2L 799192 799198 4 309 5.0 3.0 4.0 0.8 315 chr2L 798883 intergenic not near genes chr2L 799040 intergenic not near genes chr2L 799198 intergenic not near genes chr2L_4_795001 chr2L_795001 RAL-367 12 chr2L 877842 877862 chr2L 877923 877943 7 81 3.0 2.5 2.8 1.8 101 chr2L 877842 3` UTR,exon CG15824 -,ninaA + chr2L 877892 3` UTR,intron CG15824 -,ninaA + chr2L 877943 3` UTR,intron CG15824 -,ninaA + chr2L_7_875001 chr2L_875001 RAL-367 13 chr2L 898364 898394 chr2L 898440 898459 5 73 3.0 1.0 2.0 1.7 95 chr2L 898364 intergenic Lsp1beta +,CR45348 - chr2L 898412 intergenic Lsp1beta +,CR45348 - chr2L 898459 intergenic Lsp1beta +,CR45348 - chr2L_5_895001 chr2L_895001 RAL-367 14 chr2L 927862 927884 chr2L 928009 928036 5 151 1.0 0.5 0.8 2.8 174 chr2L 927862 intron CG4341 + chr2L 927949 intron CG4341 + chr2L 928036 intron CG4341 + chr2L_5_925001 chr2L_925001 RAL-367 15 chr2L 955987 955993 chr2L 956083 956089 4 96 0.0 2.5 1.2 1.8 102 chr2L 955987 intron CG4341 + chr2L 956038 intron CG4341 + chr2L 956089 intron CG4341 + chr2L_4_955001 chr2L_955001 RAL-367 16 chr2L 976878 976908 chr2L 984514 984544 roo 5 7636 3.5 2.0 2.8 1.3 7666 chr2L 976878 intergenic not near genes chr2L 980711 intergenic not near genes chr2L 984544 intergenic not near genes chr2L_5_980001 chr2L_980001 RAL-367 17 chr2L 1035557 1035590 chr2L 1035634 1035667 5 77 1.0 3.0 2.0 1.7 110 chr2L 1035557 intron IA-2 - chr2L 1035612 intron IA-2 - chr2L 1035667 intron IA-2 - chr2L_5_1035001 chr2L_1035001 RAL-367 18 chr2L 1066100 1066126 chr2L 1066181 1066207 5 81 1.5 4.5 3.0 1.2 107 chr2L 1066100 intron S - chr2L 1066154 intron S - chr2L 1066207 intron S - chr2L_5_1065001 chr2L_1065001 RAL-367 19 chr2L 1069195 1069213 chr2L 1069275 1069293 5 80 1.0 2.5 1.8 1.8 98 chr2L 1069195 intron S - chr2L 1069244 intron S - chr2L 1069293 intron S - chr2L_5_1065001 chr2L_1065001 RAL-367 20 chr2L 1156860 1156894 chr2L 1156965 1156999 4 105 1.0 2.0 1.5 1.6 139 chr2L 1156860 intron capt - chr2L 1156930 intron capt - chr2L 1156999 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-367 21 chr2L 1220128 1220161 chr2L 1227594 1227627 blood 7 7464 3.5 3.5 3.5 1.6 7499 chr2L 1220128 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227627 intron CG42329 + chr2L_7_1220001 chr2L_1220001 RAL-367 22 chr2L 1312872 1312898 chr2L 1312959 1312966 5 83 2.0 1.0 1.5 2.0 94 chr2L 1312872 intergenic not near genes chr2L 1312919 intergenic not near genes chr2L 1312966 intergenic not near genes chr2L_5_1310001 chr2L_1310001 RAL-367 23 chr2L 1322028 1322052 chr2L 1322117 1322141 4 89 2.0 2.5 2.2 1.2 113 chr2L 1322028 intergenic not near genes chr2L 1322084 intergenic not near genes chr2L 1322141 intergenic not near genes chr2L_4_1320001 chr2L_1320001 RAL-367 24 chr2L 1503424 1503459 chr2L 1503502 1503537 8 77 1.0 3.5 2.2 2.5 113 chr2L 1503424 intron CR44064 + chr2L 1503480 intron CR44064 + chr2L 1503537 intron CR44064 + chr2L_8_1500001 chr2L_1500001 RAL-367 25 chr2L 1536503 1536516 chr2L 1536635 1536648 4 132 0.0 3.0 1.5 1.6 145 chr2L 1536503 intergenic not near genes chr2L 1536576 intergenic not near genes chr2L 1536648 intergenic not near genes chr2L_4_1535001 chr2L_1535001 RAL-367 26 chr2L 1570687 1570722 chr2L 1573559 1573594 F-element 4 2872 2.5 2.0 2.2 1.2 2907 chr2L 1570687 intron haf + chr2L 1572140 intron haf + chr2L 1573594 intron haf + chr2L_4_1570001 chr2L_1570001 RAL-367 27 chr2L 1590953 1590986 chr2L 1591029 1591034 9 70 3.5 0.0 1.8 3.2 81 chr2L 1590953 intron haf + chr2L 1590994 intron haf + chr2L 1591034 intron haf + chr2L_9_1590001 chr2L_1590001 RAL-367 28 chr2L 1711360 1711389 chr2L 1711684 1711700 mdg3 8 320 2.0 3.5 2.8 2.1 340 chr2L 1711360 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711530 3` UTR frtz - chr2L 1711700 3` UTR frtz - chr2L_8_1710001 chr2L_1710001 RAL-367 29 chr2L 1721822 1721849 chr2L 1721906 1721933 7 83 1.5 2.0 1.8 2.5 111 chr2L 1721822 intron Rim2 - chr2L 1721878 intron Rim2 - chr2L 1721933 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-367 30 chr2L 2084409 2084430 chr2L 2085356 2085371 8 945 2.5 3.5 3.0 2.0 962 chr2L 2084409 intron,5` UTR dpr3 -,CR44055 + chr2L 2084890 intron dpr3 - chr2L 2085371 intron dpr3 - chr2L_8_2080001 chr2L_2080001 RAL-367 31 chr2L 2095740 2095755 chr2L 2095817 2095831 5 77 2.5 4.0 3.2 1.2 91 chr2L 2095740 intron dpr3 - chr2L 2095786 intron dpr3 - chr2L 2095831 intron dpr3 - chr2L_5_2095001 chr2L_2095001 RAL-367 32 chr2L 2100389 2100403 chr2L 2109540 2109550 roo 5 9150 7.0 3.0 5.0 0.8 9161 chr2L 2100389 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109550 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-367 33 chr2L 2290599 2290613 chr2L 2290675 2290689 5 75 1.0 5.5 3.2 1.2 90 chr2L 2290599 exon robl22E - chr2L 2290644 intron robl22E - chr2L 2290689 intron robl22E - chr2L_5_2290001 chr2L_2290001 RAL-367 34 chr2L 2302055 2302072 chr2L 2302137 2302153 4 78 4.5 2.5 3.5 0.9 98 chr2L 2302055 intergenic not near genes chr2L 2302104 intergenic not near genes chr2L 2302153 intergenic not near genes chr2L_4_2300001 chr2L_2300001 RAL-367 35 chr2L 2311076 2311092 chr2L 2311172 2311188 4 96 2.0 0.5 1.2 1.8 112 chr2L 2311076 intron CG9967 - chr2L 2311132 intron CG9967 - chr2L 2311188 intron CG9967 - chr2L_4_2310001 chr2L_2310001 RAL-367 36 chr2L 2427379 2427399 chr2L 2427465 2427485 4 86 3.5 4.0 3.8 0.8 106 chr2L 2427379 3` UTR CR44912 - chr2L 2427432 3` UTR CR44912 - chr2L 2427485 3` UTR CR44912 - chr2L_4_2425001 chr2L_2425001 RAL-367 37 chr2L 2713519 2713543 chr2L 2713618 2713642 8 98 4.5 6.5 5.5 1.2 123 chr2L 2713519 intron CG31690 + chr2L 2713580 intron CG31690 + chr2L 2713642 intron CG31690 + chr2L_8_2710001 chr2L_2710001 RAL-367 38 chr2L 2772611 2772630 chr2L 2779195 2779214 297 5 6584 1.5 2.0 1.8 1.8 6603 chr2L 2772611 3` UTR Syt1 - chr2L 2775912 intron Syt1 - chr2L 2779214 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-367 39 chr2L 2826538 2826574 chr2L 2826629 2826655 4 87 0.0 4.5 2.2 1.2 117 chr2L 2826538 intron Duox - chr2L 2826596 intron Duox - chr2L 2826655 intron Duox - chr2L_4_2825001 chr2L_2825001 RAL-367 40 chr2L 2933314 2933332 chr2L 2935491 2935509 pogo 5 2177 3.0 4.5 3.8 1.0 2195 chr2L 2933314 intron lilli + chr2L 2934412 intron lilli + chr2L 2935509 intron lilli + chr2L_5_2930001 chr2L_2930001 RAL-367 41 chr2L 3073017 3073026 chr2L 3078239 3078249 copia 6 5223 2.5 2.0 2.2 1.9 5232 chr2L 3073017 intron toc - chr2L 3075633 intron toc - chr2L 3078249 intron toc - chr2L_6_3075001 chr2L_3075001 RAL-367 42 chr2L 3108868 3108897 chr2L 3108945 3108974 10 77 0.5 0.0 0.2 8.3 106 chr2L 3108868 intron toc - chr2L 3108921 intron toc - chr2L 3108974 intron toc - chr2L_10_3105001 chr2L_3105001 RAL-367 43 chr2L 3136894 3136926 chr2L 3136970 3137002 12 76 4.5 2.5 3.5 2.7 108 chr2L 3136894 intron toc - chr2L 3136948 intron toc - chr2L 3137002 intron toc - chr2L_12_3135001 chr2L_3135001 RAL-367 44 chr2L 3291249 3291267 chr2L 3291329 3291347 5 80 3.0 3.5 3.2 1.2 98 chr2L 3291249 3` UTR CG9664 - chr2L 3291298 3` UTR CG9664 - chr2L 3291347 3` UTR CG9664 - chr2L_5_3290001 chr2L_3290001 RAL-367 45 chr2L 3294356 3294388 chr2L 3294453 3294485 8 97 4.5 2.0 3.2 1.9 129 chr2L 3294356 5` UTR CG9664 - chr2L 3294420 5` UTR CG9664 - chr2L 3294485 5` UTR CG9664 - chr2L_8_3290001 chr2L_3290001 RAL-367 46 chr2L 3386248 3386262 chr2L 3386349 3386370 10 105 3.0 3.0 3.0 2.5 122 chr2L 3386248 intergenic not near genes chr2L 3386309 intergenic not near genes chr2L 3386370 intergenic CR45301 - chr2L_10_3385001 chr2L_3385001 RAL-367 47 chr2L 3393546 3393561 chr2L 3393657 3393672 5 111 2.5 1.0 1.8 1.8 126 chr2L 3393546 intergenic not near genes chr2L 3393609 intergenic not near genes chr2L 3393672 intergenic not near genes chr2L_5_3390001 chr2L_3390001 RAL-367 48 chr2L 3418866 3418884 chr2L 3419249 3419262 7 382 1.5 0.5 1.0 3.5 396 chr2L 3418866 intron pgant2 - chr2L 3419064 intron pgant2 - chr2L 3419262 intron pgant2 - chr2L_7_3415001 chr2L_3415001 RAL-367 49 chr2L 3482152 3482179 chr2L 3482242 3482269 7 90 0.0 1.5 0.8 3.9 117 chr2L 3482152 intron CG15414 - chr2L 3482210 intron CG15414 - chr2L 3482269 intron CG15414 - chr2L_7_3480001 chr2L_3480001 RAL-367 50 chr2L 3508352 3508373 chr2L 3508430 3508451 5 78 0.0 1.5 0.8 2.8 99 chr2L 3508352 intergenic tim -,CR45299 + chr2L 3508402 intergenic CR45299 +,tim - chr2L 3508451 intergenic CR45299 +,tim - chr2L_5_3505001 chr2L_3505001 RAL-367 51 chr2L 3523033 3523047 chr2L 3523145 3523158 7 112 1.5 0.0 0.8 3.9 125 chr2L 3523033 exon Sr-CIV - chr2L 3523096 intron Sr-CIV - chr2L 3523158 exon Sr-CIV - chr2L_7_3520001 chr2L_3520001 RAL-367 52 chr2L 3536109 3536122 chr2L 3536197 3536210 4 88 2.0 3.0 2.5 1.1 101 chr2L 3536109 intergenic not near genes chr2L 3536160 intergenic not near genes chr2L 3536210 intergenic not near genes chr2L_4_3535001 chr2L_3535001 RAL-367 53 chr2L 3540356 3540375 chr2L 3540456 3540475 4 99 0.0 2.0 1.0 2.0 119 chr2L 3540356 intron drm + chr2L 3540416 intron drm + chr2L 3540475 intron drm + chr2L_4_3540001 chr2L_3540001 RAL-367 54 chr2L 3634118 3634135 chr2L 3634180 3634217 6 78 0.5 1.5 1.0 3.0 99 chr2L 3634118 intron for - chr2L 3634168 intron for - chr2L 3634217 intron for - chr2L_6_3630001 chr2L_3630001 RAL-367 55 chr2L 3783254 3783275 chr2L 3783345 3783364 4 90 2.0 3.0 2.5 1.1 110 chr2L 3783254 exon bowl + chr2L 3783309 3` UTR bowl + chr2L 3783364 3` UTR bowl + chr2L_4_3780001 chr2L_3780001 RAL-367 56 chr2L 3784716 3784726 chr2L 3786373 3786383 4 1657 17.0 10.5 13.8 0.3 1667 chr2L 3784716 intergenic CG31960 + chr2L 3785550 3` UTR CG31960 + chr2L 3786383 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-367 57 chr2L 3879281 3879312 chr2L 3879499 3879530 11 218 2.5 0.5 1.5 4.4 249 chr2L 3879281 intron capu - chr2L 3879406 intron capu - chr2L 3879530 intron capu - chr2L_11_3875001 chr2L_3875001 RAL-367 58 chr2L 3891893 3891919 chr2L 3891978 3892004 7 85 3.5 2.5 3.0 1.8 111 chr2L 3891893 intron capu - chr2L 3891948 intron capu - chr2L 3892004 intron capu - chr2L_7_3890001 chr2L_3890001 RAL-367 59 chr2L 4037545 4037572 chr2L 4037988 4038017 8 445 1.5 2.0 1.8 2.9 472 chr2L 4037545 intron ed + chr2L 4037781 intron ed + chr2L 4038017 intron ed + chr2L_8_4035001 chr2L_4035001 RAL-367 60 chr2L 4160501 4160529 chr2L 4160912 4160940 4 409 1.5 4.5 3.0 1.0 439 chr2L 4160501 intergenic not near genes chr2L 4160720 intergenic not near genes chr2L 4160940 intergenic not near genes chr2L_4_4160001 chr2L_4160001 RAL-367 61 chr2L 4285717 4285738 chr2L 4285791 4285818 9 79 2.0 3.5 2.8 2.4 101 chr2L 4285717 intron tutl + chr2L 4285768 intron tutl + chr2L 4285818 intron tutl + chr2L_9_4285001 chr2L_4285001 RAL-367 62 chr2L 4293998 4294012 chr2L 4294089 4294104 5 92 3.5 1.0 2.2 1.6 106 chr2L 4293998 intron tutl + chr2L 4294051 intron tutl + chr2L 4294104 intron tutl + chr2L_5_4290001 chr2L_4290001 RAL-367 63 chr2L 4305250 4305273 chr2L 4305321 4305351 5 76 1.5 1.5 1.5 2.0 101 chr2L 4305250 intron tutl + chr2L 4305300 intron tutl + chr2L 4305351 intron tutl + chr2L_5_4305001 chr2L_4305001 RAL-367 64 chr2L 4601705 4601737 chr2L 4609146 4609178 mdg1 9 7441 2.0 2.5 2.2 2.8 7473 chr2L 4601705 intron dp - chr2L 4605442 intron dp - chr2L 4609178 intron dp - chr2L_9_4605001 chr2L_4605001 RAL-367 65 chr2L 4676860 4676891 chr2L 4676939 4676970 10 79 1.5 3.0 2.2 3.1 110 chr2L 4676860 intergenic not near genes chr2L 4676915 intergenic not near genes chr2L 4676970 intergenic not near genes chr2L_10_4675001 chr2L_4675001 RAL-367 66 chr2L 4698787 4698796 chr2L 4699321 4699330 4 534 18.0 7.0 12.5 0.3 543 chr2L 4698787 intron CG34351 + chr2L 4699058 intron CG34351 + chr2L 4699330 intron CG34351 + chr2L_4_4695001 chr2L_4695001 RAL-367 67 chr2L 4869469 4869494 chr2L 4869549 4869574 7 77 1.5 3.5 2.5 2.0 105 chr2L 4869469 intron pog + chr2L 4869522 intron pog + chr2L 4869574 intron pog + chr2L_7_4865001 chr2L_4865001 RAL-367 68 chr2L 4953512 4953544 chr2L 4953753 4953785 pogo 8 241 2.5 1.0 1.8 2.9 273 chr2L 4953512 intergenic Jon25Bii - chr2L 4953648 intergenic not near genes chr2L 4953785 intergenic Jon25Bi - chr2L_8_4950001 chr2L_4950001 RAL-367 69 chr2L 5083225 5083255 chr2L 5083305 5083335 16 80 27.0 24.0 25.5 0.6 110 chr2L 5083225 intron pgant5 - chr2L 5083280 intron pgant5 - chr2L 5083335 intron pgant5 - chr2L_16_5080001 chr2L_5080001 RAL-367 70 chr2L 5120973 5120995 chr2L 5121067 5121089 9 94 4.0 4.0 4.0 1.8 116 chr2L 5120973 intron Msp300 + chr2L 5121031 intron Msp300 + chr2L 5121089 intron Msp300 + chr2L_9_5120001 chr2L_5120001 RAL-367 71 chr2L 5200544 5200560 chr2L 5215799 5215814 4 15251 22.5 12.0 17.2 0.2 15270 chr2L 5200544 exon Msp300 + chr2L 5208179 exon Cyp28d2 + chr2L 5215814 exon CG14034 - chr2L_4_5205001 chr2L_5205001 RAL-367 72 chr2L 5342777 5342798 chr2L 5345157 5345178 Doc 4 2380 2.5 1.5 2.0 1.3 2401 chr2L 5342777 intergenic not near genes chr2L 5343978 intergenic not near genes chr2L 5345178 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-367 73 chr2L 5448010 5448020 chr2L 5448094 5448104 4 84 0.0 1.5 0.8 2.2 94 chr2L 5448010 intergenic not near genes chr2L 5448057 intergenic not near genes chr2L 5448104 intergenic not near genes chr2L_4_5445001 chr2L_5445001 RAL-367 74 chr2L 5500053 5500074 chr2L 5500139 5500160 9 86 4.0 2.5 3.2 2.1 107 chr2L 5500053 intergenic not near genes chr2L 5500106 intergenic not near genes chr2L 5500160 intergenic not near genes chr2L_9_5500001 chr2L_5500001 RAL-367 75 chr2L 5814691 5814713 chr2L 5814774 5814784 5 79 1.0 2.0 1.5 2.0 93 chr2L 5814691 intergenic not near genes chr2L 5814738 intergenic not near genes chr2L 5814784 intergenic not near genes chr2L_5_5810001 chr2L_5810001 RAL-367 76 chr2L 5827713 5827740 chr2L 5836721 5836748 roo 8 9008 5.5 1.5 3.5 1.8 9035 chr2L 5827713 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836748 intron TrissinR + chr2L_8_5830001 chr2L_5830001 RAL-367 77 chr2L 5839093 5839126 chr2L 5839173 5839195 16 79 3.0 2.0 2.5 4.6 102 chr2L 5839093 intron TrissinR + chr2L 5839144 intron TrissinR + chr2L 5839195 intron TrissinR + chr2L_16_5835001 chr2L_5835001 RAL-367 78 chr2L 5883164 5883169 chr2L 5883244 5883249 4 80 0.0 6.0 3.0 1.0 85 chr2L 5883164 intergenic not near genes chr2L 5883206 intergenic not near genes chr2L 5883249 intergenic CG44574 + chr2L_4_5880001 chr2L_5880001 RAL-367 79 chr2L 5887609 5887634 chr2L 5887690 5887715 4 81 1.0 1.5 1.2 1.8 106 chr2L 5887609 3` UTR CR44577 - chr2L 5887662 3` UTR CR44577 - chr2L 5887715 3` UTR CR44577 - chr2L_4_5885001 chr2L_5885001 RAL-367 80 chr2L 5897595 5897628 chr2L 5897678 5897711 15 82 3.5 2.5 3.0 3.8 116 chr2L 5897595 intergenic not near genes chr2L 5897653 intergenic not near genes chr2L 5897711 intergenic not near genes chr2L_15_5895001 chr2L_5895001 RAL-367 81 chr2L 5942038 5942055 chr2L 5942121 5942147 5 88 1.5 1.5 1.5 2.0 109 chr2L 5942038 5` UTR CR45289 + chr2L 5942092 5` UTR CR45289 + chr2L 5942147 5` UTR CR45289 + chr2L_5_5940001 chr2L_5940001 RAL-367 82 chr2L 6103220 6103247 chr2L 6103297 6103324 10 77 1.5 3.5 2.5 2.9 104 chr2L 6103220 intron stai + chr2L 6103272 intron stai + chr2L 6103324 intron stai + chr2L_10_6100001 chr2L_6100001 RAL-367 83 chr2L 6106224 6106237 chr2L 6106314 6106327 4 90 0.5 2.0 1.2 1.8 103 chr2L 6106224 intron stai + chr2L 6106276 intron stai + chr2L 6106327 intron stai + chr2L_4_6105001 chr2L_6105001 RAL-367 84 chr2L 6260428 6260447 chr2L 6260775 6260794 10 347 3.0 3.0 3.0 2.5 366 chr2L 6260428 intron Ddr + chr2L 6260611 intron Ddr + chr2L 6260794 intron Ddr + chr2L_10_6260001 chr2L_6260001 RAL-367 85 chr2L 6315285 6315315 chr2L 6315377 6315407 11 91 3.5 0.5 2.0 3.7 122 chr2L 6315285 intron Ddr + chr2L 6315346 intron Ddr + chr2L 6315407 intron Ddr + chr2L_11_6315001 chr2L_6315001 RAL-367 86 chr2L 6363151 6363168 chr2L 6366077 6366094 Burdock 5 2926 1.5 3.5 2.5 1.4 2943 chr2L 6363151 intergenic not near genes chr2L 6364622 intergenic not near genes chr2L 6366094 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-367 87 chr2L 6426873 6426887 chr2L 6445133 6445147 roo 4 18260 3.0 4.0 3.5 0.9 18274 chr2L 6426873 3` UTR CG9527 - chr2L 6436010 intron CG9527 - chr2L 6445147 exon CG9527 - chr2L_4_6435001 chr2L_6435001 RAL-367 88 chr2L 6570122 6570140 chr2L 6570246 6570264 5 124 2.5 3.0 2.8 1.3 142 chr2L 6570122 3` UTR CG11319 - chr2L 6570193 3` UTR CG11319 - chr2L 6570264 3` UTR CG11319 - chr2L_5_6570001 chr2L_6570001 RAL-367 89 chr2L 6640905 6640939 chr2L 6641000 6641034 12 95 3.5 3.0 3.2 2.9 129 chr2L 6640905 exon CG31635 - chr2L 6640970 intron CG31635 - chr2L 6641034 intron CG31635 - chr2L_12_6640001 chr2L_6640001 RAL-367 90 chr2L 6655527 6655545 chr2L 6655889 6655907 6 362 2.5 3.0 2.8 1.6 380 chr2L 6655527 exon CG31633 - chr2L 6655717 exon CG31633 - chr2L 6655907 exon CG31633 - chr2L_6_6655001 chr2L_6655001 RAL-367 91 chr2L 6799535 6799565 chr2L 6799623 6799653 5 88 0.5 0.0 0.2 4.2 118 chr2L 6799535 5` UTR CR43610 + chr2L 6799594 5` UTR CR43610 + chr2L 6799653 intergenic CR43610 +,CG17376 - chr2L_5_6795001 chr2L_6795001 RAL-367 92 chr2L 6876785 6876810 chr2L 6882975 6883001 diver 4 6191 1.5 5.0 3.2 1.0 6216 chr2L 6876785 intron Nlg2 + chr2L 6879893 intron Nlg2 + chr2L 6883001 intron Nlg2 + chr2L_4_6875001 chr2L_6875001 RAL-367 93 chr2L 7042066 7042085 chr2L 7042155 7042174 4 89 2.5 2.0 2.2 1.2 108 chr2L 7042066 intron milt + chr2L 7042120 intron milt + chr2L 7042174 intron milt + chr2L_4_7040001 chr2L_7040001 RAL-367 94 chr2L 7147666 7147698 chr2L 7147778 7147810 11 114 33.5 22.5 28.0 0.4 144 chr2L 7147666 intron Pvf3 - chr2L 7147738 intron Pvf3 - chr2L 7147810 intron Pvf3 - chr2L_11_7145001 chr2L_7145001 RAL-367 95 chr2L 7244720 7244748 chr2L 7244845 7244873 4 125 1.0 1.5 1.2 1.8 153 chr2L 7244720 intron Ndae1 - chr2L 7244796 intron Ndae1 - chr2L 7244873 intron Ndae1 - chr2L_4_7240001 chr2L_7240001 RAL-367 96 chr2L 7325913 7325946 chr2L 7325998 7326031 6 84 4.0 3.0 3.5 1.3 118 chr2L 7325913 intergenic not near genes chr2L 7325972 intergenic not near genes chr2L 7326031 intergenic not near genes chr2L_6_7325001 chr2L_7325001 RAL-367 97 chr2L 7343324 7343358 chr2L 7350440 7350473 roo 10 7116 2.0 5.0 3.5 2.2 7149 chr2L 7343324 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350473 intron Wnt6 + chr2L_10_7345001 chr2L_7345001 RAL-367 98 chr2L 7363527 7363547 chr2L 7363605 7363625 5 78 0.0 0.5 0.2 4.2 98 chr2L 7363527 5` UTR Wnt10 + chr2L 7363576 5` UTR Wnt10 + chr2L 7363625 5` UTR Wnt10 + chr2L_5_7360001 chr2L_7360001 RAL-367 99 chr2L 7405780 7405803 chr2L 7405860 7405883 15 79 1.0 2.5 1.8 5.4 103 chr2L 7405780 intron CG5177 + chr2L 7405832 intron CG5177 + chr2L 7405883 intron CG5177 + chr2L_15_7405001 chr2L_7405001 RAL-367 100 chr2L 7502736 7502767 chr2L 7502812 7502843 15 73 2.5 3.0 2.8 3.9 107 chr2L 7502736 intron RapGAP1 - chr2L 7502790 intron RapGAP1 - chr2L 7502843 intron RapGAP1 - chr2L_15_7500001 chr2L_7500001 RAL-367 101 chr2L 7841288 7841315 chr2L 7841474 7841500 11 186 3.0 3.0 3.0 2.8 212 chr2L 7841288 intergenic CG14537 + chr2L 7841394 intergenic CG14537 + chr2L 7841500 intergenic CG14537 + chr2L_11_7840001 chr2L_7840001 RAL-367 102 chr2L 7861319 7861335 chr2L 7861423 7861438 4 104 3.0 1.5 2.2 1.2 119 chr2L 7861319 intergenic TwdlE - chr2L 7861378 intergenic not near genes chr2L 7861438 intergenic not near genes chr2L_4_7860001 chr2L_7860001 RAL-367 103 chr2L 7867571 7867588 chr2L 7867665 7867682 6 94 4.0 1.5 2.8 1.6 111 chr2L 7867571 intron Proc - chr2L 7867626 intron Proc - chr2L 7867682 intron Proc - chr2L_6_7865001 chr2L_7865001 RAL-367 104 chr2L 7922741 7922767 chr2L 7922822 7922843 6 80 1.0 2.5 1.8 2.1 102 chr2L 7922741 intron Snoo - chr2L 7922792 intron Snoo - chr2L 7922843 intron Snoo - chr2L_6_7920001 chr2L_7920001 RAL-367 105 chr2L 7959022 7959073 chr2L 7960455 7960484 pogo 6 1429 0.0 1.5 0.8 3.3 1462 chr2L 7959022 intron Snoo - chr2L 7959753 intron Snoo - chr2L 7960484 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-367 106 chr2L 7977090 7977113 chr2L 7984066 7984089 297 5 6976 2.0 4.5 3.2 1.2 6999 chr2L 7977090 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984089 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 RAL-367 107 chr2L 8167150 8167180 chr2L 8167241 8167271 9 91 0.0 3.0 1.5 3.6 121 chr2L 8167150 intron Piezo + chr2L 8167210 intron Piezo + chr2L 8167271 intron Piezo + chr2L_9_8165001 chr2L_8165001 RAL-367 108 chr2L 8167713 8167742 chr2L 8167792 8167821 10 79 2.0 2.0 2.0 3.3 108 chr2L 8167713 intron Piezo + chr2L 8167767 intron Piezo + chr2L 8167821 intron Piezo + chr2L_10_8165001 chr2L_8165001 RAL-367 109 chr2L 8184919 8184948 chr2L 8185010 8185039 10 91 0.5 1.5 1.0 5.0 120 chr2L 8184919 intron Piezo + chr2L 8184979 intron Piezo + chr2L 8185039 intron Piezo + chr2L_10_8180001 chr2L_8180001 RAL-367 110 chr2L 8205797 8205810 chr2L 8205920 8205933 7 123 0.5 1.5 1.0 3.5 136 chr2L 8205797 3` UTR CR44121 - chr2L 8205865 3` UTR CR44121 - chr2L 8205933 3` UTR CR44121 - chr2L_7_8205001 chr2L_8205001 RAL-367 111 chr2L 8286303 8286312 chr2L 8286390 8286399 4 87 3.0 5.0 4.0 0.8 96 chr2L 8286303 intron Btk29A - chr2L 8286351 intron Btk29A - chr2L 8286399 intron Btk29A - chr2L_4_8285001 chr2L_8285001 RAL-367 112 chr2L 8337890 8337906 chr2L 8337972 8337988 4 81 0.5 3.0 1.8 1.4 98 chr2L 8337890 intergenic CG14274 + chr2L 8337939 intergenic CG14274 + chr2L 8337988 intergenic CG14274 + chr2L_4_8335001 chr2L_8335001 RAL-367 113 chr2L 8452423 8452449 chr2L 8461594 8461620 roo 4 9171 1.5 2.0 1.8 1.4 9197 chr2L 8452423 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461620 intron fu12 - chr2L_4_8455001 chr2L_8455001 RAL-367 114 chr2L 8498208 8498239 chr2L 8498289 8498320 9 81 2.0 0.5 1.2 4.1 112 chr2L 8498208 intron Dh31 - chr2L 8498264 intron Dh31 - chr2L 8498320 intron Dh31 - chr2L_9_8495001 chr2L_8495001 RAL-367 115 chr2L 8605979 8605998 chr2L 8606054 8606074 7 75 3.5 0.0 1.8 2.5 95 chr2L 8605979 intron Sema-1a + chr2L 8606026 intron Sema-1a + chr2L 8606074 intron Sema-1a + chr2L_7_8605001 chr2L_8605001 RAL-367 116 chr2L 8637404 8637433 chr2L 8637503 8637532 10 97 2.5 1.5 2.0 3.3 128 chr2L 8637404 intron Sema-1a + chr2L 8637468 intron Sema-1a + chr2L 8637532 intron Sema-1a + chr2L_10_8635001 chr2L_8635001 RAL-367 117 chr2L 8723119 8723135 chr2L 8731496 8731512 Tirant 4 8377 4.5 3.5 4.0 0.8 8393 chr2L 8723119 intron raw - chr2L 8727316 intron raw - chr2L 8731512 intron raw - chr2L_4_8725001 chr2L_8725001 RAL-367 118 chr2L 8810779 8810794 chr2L 8810862 8810887 4 89 5.0 1.5 3.2 1.0 108 chr2L 8810779 intergenic not near genes chr2L 8810833 intergenic not near genes chr2L 8810887 intergenic not near genes chr2L_4_8810001 chr2L_8810001 RAL-367 119 chr2L 8938403 8938435 chr2L 8938484 8938516 9 81 1.0 2.5 1.8 3.2 113 chr2L 8938403 intron Tsp29Fb + chr2L 8938460 intron Tsp29Fb + chr2L 8938516 intron Tsp29Fb + chr2L_9_8935001 chr2L_8935001 RAL-367 120 chr2L 9000288 9000306 chr2L 9007798 9007816 roo 7 7510 3.5 5.0 4.2 1.3 7528 chr2L 9000288 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007816 intergenic not near genes chr2L_7_9000001 chr2L_9000001 RAL-367 121 chr2L 9023159 9023185 chr2L 9023249 9023271 9 93 5.0 4.0 4.5 1.6 112 chr2L 9023159 intergenic not near genes chr2L 9023215 intergenic not near genes chr2L 9023271 intergenic not near genes chr2L_9_9020001 chr2L_9020001 RAL-367 122 chr2L 9040029 9040059 chr2L 9040116 9040146 6 87 4.5 2.0 3.2 1.4 117 chr2L 9040029 intergenic not near genes chr2L 9040088 intergenic not near genes chr2L 9040146 intergenic not near genes chr2L_6_9040001 chr2L_9040001 RAL-367 123 chr2L 9084339 9084340 chr2L 16217660 16217660 8 7133321 14.0 17.0 15.5 0.5 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-367 124 chr2L 9152139 9152158 chr2L 9152266 9152285 6 127 0.0 2.0 1.0 3.0 146 chr2L 9152139 intron CG32982 + chr2L 9152212 intron CG32982 + chr2L 9152285 intron CG32982 + chr2L_6_9150001 chr2L_9150001 RAL-367 125 chr2L 9251146 9251176 chr2L 9251243 9251273 12 96 2.0 2.0 2.0 4.0 127 chr2L 9251146 intergenic aust -,borr - chr2L 9251210 intergenic aust -,borr - chr2L 9251273 intergenic borr -,aust - chr2L_12_9250001 chr2L_9250001 RAL-367 126 chr2L 9262129 9262144 chr2L 9262234 9262249 5 105 3.5 3.5 3.5 1.1 120 chr2L 9262129 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262189 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262249 intron,intron Ggamma30A +,CR45262 - chr2L_5_9260001 chr2L_9260001 RAL-367 127 chr2L 9280013 9280024 chr2L 9280087 9280118 4 89 0.0 1.5 0.8 2.2 105 chr2L 9280013 intron Ggamma30A + chr2L 9280066 intron Ggamma30A + chr2L 9280118 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-367 128 chr2L 9297380 9297392 chr2L 9297457 9297469 5 77 5.5 2.0 3.8 1.0 89 chr2L 9297380 3` UTR Ggamma30A + chr2L 9297424 3` UTR Ggamma30A + chr2L 9297469 3` UTR Ggamma30A + chr2L_5_9295001 chr2L_9295001 RAL-367 129 chr2L 9303516 9303546 chr2L 9303596 9303603 8 74 1.0 4.0 2.5 2.3 87 chr2L 9303516 intergenic not near genes chr2L 9303560 intergenic not near genes chr2L 9303603 intergenic not near genes chr2L_8_9300001 chr2L_9300001 RAL-367 130 chr2L 9305376 9305410 chr2L 9305762 9305796 15 385 4.5 3.0 3.8 3.1 420 chr2L 9305376 intergenic CR42844 - chr2L 9305586 intergenic not near genes chr2L 9305796 intergenic not near genes chr2L_15_9305001 chr2L_9305001 RAL-367 131 chr2L 9380246 9380254 chr2L 9380341 9380349 4 95 3.5 1.5 2.5 1.1 103 chr2L 9380246 exon Shawl - chr2L 9380298 intron Shawl - chr2L 9380349 intron Shawl - chr2L_4_9380001 chr2L_9380001 RAL-367 132 chr2L 9572501 9572516 chr2L 9576521 9576538 6 4023 17.5 30.5 24.0 0.2 4037 chr2L 9572501 exon CG3838 + chr2L 9574520 exon Mtpalpha - chr2L 9576538 5` UTR Mtpalpha - chr2L_6_9570001 chr2L_9570001 RAL-367 133 chr2L 9730975 9731001 chr2L 9731058 9731084 4 83 0.5 0.0 0.2 3.3 109 chr2L 9730975 intron Nckx30C - chr2L 9731030 intron Nckx30C - chr2L 9731084 intron Nckx30C - chr2L_4_9730001 chr2L_9730001 RAL-367 134 chr2L 9767624 9767651 chr2L 9767723 9767741 8 92 4.0 0.0 2.0 2.7 117 chr2L 9767624 intron,exon ppk18 -,CG4017 + chr2L 9767682 intron,exon ppk18 -,CG4017 + chr2L 9767741 intron,exon ppk18 -,CG4017 + chr2L_8_9765001 chr2L_9765001 RAL-367 135 chr2L 9874421 9874429 chr2L 9874485 9874510 8 74 6.0 7.0 6.5 1.1 89 chr2L 9874421 intron nAChRalpha6 - chr2L 9874466 intron nAChRalpha6 - chr2L 9874510 intron nAChRalpha6 - chr2L_8_9870001 chr2L_9870001 RAL-367 136 chr2L 9892512 9892530 chr2L 9892588 9892606 6 76 5.0 2.0 3.5 1.3 94 chr2L 9892512 intron mtDNA-helicase - chr2L 9892559 intron mtDNA-helicase - chr2L 9892606 intron mtDNA-helicase - chr2L_6_9890001 chr2L_9890001 RAL-367 137 chr2L 9973730 9973756 chr2L 9980849 9980855 HMS-Beagle 9 7117 5.0 4.0 4.5 1.6 7125 chr2L 9973730 intergenic not near genes chr2L 9977292 intergenic not near genes chr2L 9980855 intergenic not near genes chr2L_9_9975001 chr2L_9975001 RAL-367 138 chr2L 9986349 9986380 chr2L 9986444 9986475 11 92 2.0 3.5 2.8 2.9 126 chr2L 9986349 intron bib + chr2L 9986412 intron bib + chr2L 9986475 intron bib + chr2L_11_9985001 chr2L_9985001 RAL-367 139 chr2L 10051730 10051753 chr2L 10051815 10051833 10 83 2.0 3.0 2.5 2.9 103 chr2L 10051730 5` UTR CR44874 + chr2L 10051782 5` UTR CR44874 + chr2L 10051833 5` UTR CR44874 + chr2L_10_10050001 chr2L_10050001 RAL-367 140 chr2L 10087477 10087488 chr2L 10087554 10087565 4 77 3.0 3.5 3.2 1.0 88 chr2L 10087477 intron CG44153 - chr2L 10087521 intron CG44153 - chr2L 10087565 intron CG44153 - chr2L_4_10085001 chr2L_10085001 RAL-367 141 chr2L 10153200 10153238 chr2L 10153279 10153317 10 76 1.0 1.0 1.0 5.0 117 chr2L 10153200 intron,exon CG44153 -,CG4839 + chr2L 10153258 intron,intron CG44153 -,CG4839 + chr2L 10153317 intron,intron CG44153 -,CG4839 + chr2L_10_10150001 chr2L_10150001 RAL-367 142 chr2L 10156330 10156346 chr2L 10163800 10163816 blood 8 7470 3.0 4.0 3.5 1.8 7486 chr2L 10156330 intron,3` UTR CG44153 -,CG4839 + chr2L 10160073 intron CG44153 - chr2L 10163816 intron CG44153 - chr2L_8_10160001 chr2L_10160001 RAL-367 143 chr2L 10474390 10474410 chr2L 10474471 10474491 6 81 3.0 0.5 1.8 2.1 101 chr2L 10474390 intergenic RluA-1 - chr2L 10474440 intergenic RluA-1 - chr2L 10474491 intergenic RluA-1 - chr2L_6_10470001 chr2L_10470001 RAL-367 144 chr2L 10563910 10563947 chr2L 10564003 10564040 5 89 1.5 2.5 2.0 1.7 130 chr2L 10563910 intron Trim9 + chr2L 10563975 intron Trim9 + chr2L 10564040 intron Trim9 + chr2L_5_10560001 chr2L_10560001 RAL-367 145 chr2L 10580796 10580824 chr2L 10580871 10580905 8 80 1.0 2.5 1.8 2.9 109 chr2L 10580796 intron Trim9 + chr2L 10580850 intron Trim9 + chr2L 10580905 intron Trim9 + chr2L_8_10580001 chr2L_10580001 RAL-367 146 chr2L 10673741 10673766 chr2L 10673823 10673848 9 81 1.0 2.0 1.5 3.6 107 chr2L 10673741 intergenic not near genes chr2L 10673794 intergenic not near genes chr2L 10673848 intergenic not near genes chr2L_9_10670001 chr2L_10670001 RAL-367 147 chr2L 10688541 10688572 chr2L 10688617 10688643 4 73 0.0 0.5 0.2 3.3 102 chr2L 10688541 intergenic CG7294 - chr2L 10688592 intergenic CG7294 - chr2L 10688643 intergenic CG7294 - chr2L_4_10685001 chr2L_10685001 RAL-367 148 chr2L 10704919 10704930 chr2L 10705014 10705025 6 95 4.5 1.5 3.0 1.5 106 chr2L 10704919 intron,3` UTR Lip2 -,CG6415 + chr2L 10704972 intron Lip2 - chr2L 10705025 intron Lip2 - chr2L_6_10700001 chr2L_10700001 RAL-367 149 chr2L 10705453 10705466 chr2L 10705536 10705549 4 83 3.5 4.5 4.0 0.8 96 chr2L 10705453 exon Lip2 - chr2L 10705501 intron Lip2 - chr2L 10705549 intron Lip2 - chr2L_4_10705001 chr2L_10705001 RAL-367 150 chr2L 10755568 10755586 chr2L 10755677 10755695 6 109 1.5 1.0 1.2 2.7 127 chr2L 10755568 intron CG17124 - chr2L 10755632 intron CG17124 - chr2L 10755695 intron CG17124 - chr2L_6_10755001 chr2L_10755001 RAL-367 151 chr2L 10785064 10785093 chr2L 10785140 10785169 6 76 3.5 2.5 3.0 1.5 105 chr2L 10785064 intron CG31869 - chr2L 10785116 intron CG31869 - chr2L 10785169 intron CG31869 - chr2L_6_10785001 chr2L_10785001 RAL-367 152 chr2L 10789092 10789112 chr2L 10789189 10789209 5 97 1.0 0.0 0.5 3.3 117 chr2L 10789092 intron CG31869 - chr2L 10789150 intron CG31869 - chr2L 10789209 intron CG31869 - chr2L_5_10785001 chr2L_10785001 RAL-367 153 chr2L 10789704 10789721 chr2L 10789809 10789826 4 105 0.0 4.0 2.0 1.3 122 chr2L 10789704 intron CG31869 - chr2L 10789765 intron CG31869 - chr2L 10789826 intron CG31869 - chr2L_4_10785001 chr2L_10785001 RAL-367 154 chr2L 10862841 10862867 chr2L 10864454 10864466 Rt1c 8 1610 2.5 1.0 1.8 2.9 1625 chr2L 10862841 3` UTR CR43807 - chr2L 10863654 intron CR43807 - chr2L 10864466 3` UTR CR43807 - chr2L_8_10860001 chr2L_10860001 RAL-367 155 chr2L 10862869 10862880 chr2L 10864450 10864470 Rt1c 4 1595 2.5 1.0 1.8 1.4 1601 chr2L 10862869 3` UTR CR43807 - chr2L 10863670 intron CR43807 - chr2L 10864470 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-367 156 chr2L 10914801 10914829 chr2L 10914892 10914920 6 90 3.5 2.0 2.8 1.6 119 chr2L 10914801 intergenic not near genes chr2L 10914860 intergenic not near genes chr2L 10914920 intergenic not near genes chr2L_6_10910001 chr2L_10910001 RAL-367 157 chr2L 10946961 10946973 chr2L 10956176 10956188 roo 5 9215 2.5 6.5 4.5 0.9 9227 chr2L 10946961 intron dpr2 - chr2L 10951574 intron dpr2 - chr2L 10956188 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-367 158 chr2L 11001536 11001561 chr2L 11003853 11003878 4 2317 6.0 18.5 12.2 0.3 2342 chr2L 11001536 intergenic aub - chr2L 11002707 3` UTR lectin-33A + chr2L 11003878 intron RpL9 - chr2L_4_11000001 chr2L_11000001 RAL-367 159 chr2L 11084663 11084699 chr2L 11084798 11084834 4 135 3.0 1.5 2.2 1.2 171 chr2L 11084663 intron AstCC - chr2L 11084748 intron AstCC - chr2L 11084834 exon AstCC - chr2L_4_11080001 chr2L_11080001 RAL-367 160 chr2L 11339921 11339940 chr2L 11339997 11340016 4 75 2.0 3.5 2.8 1.1 95 chr2L 11339921 intergenic not near genes chr2L 11339968 intergenic not near genes chr2L 11340016 intergenic not near genes chr2L_4_11335001 chr2L_11335001 RAL-367 161 chr2L 11413291 11413321 chr2L 11413415 11413445 5 124 2.0 0.5 1.2 2.3 154 chr2L 11413291 intergenic not near genes chr2L 11413368 intergenic not near genes chr2L 11413445 intergenic not near genes chr2L_5_11410001 chr2L_11410001 RAL-367 162 chr2L 11418667 11418688 chr2L 11418746 11418767 6 78 1.5 2.5 2.0 2.0 100 chr2L 11418667 intergenic not near genes chr2L 11418717 intergenic not near genes chr2L 11418767 intergenic not near genes chr2L_6_11415001 chr2L_11415001 RAL-367 163 chr2L 11537759 11537783 chr2L 11537876 11537900 4 117 2.0 1.5 1.8 1.4 141 chr2L 11537759 intergenic not near genes chr2L 11537830 intergenic not near genes chr2L 11537900 intergenic not near genes chr2L_4_11535001 chr2L_11535001 RAL-367 164 chr2L 11563644 11563669 chr2L 11568848 11568873 copia 7 5204 3.5 3.0 3.2 1.7 5229 chr2L 11563644 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568873 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-367 165 chr2L 11608925 11608954 chr2L 11609007 11609036 5 81 0.0 0.5 0.2 4.2 111 chr2L 11608925 intron kek2 + chr2L 11608980 intron kek2 + chr2L 11609036 intron kek2 + chr2L_5_11605001 chr2L_11605001 RAL-367 166 chr2L 11707049 11707082 chr2L 11707154 11707187 8 105 1.0 1.5 1.2 3.6 138 chr2L 11707049 intergenic not near genes chr2L 11707118 intergenic not near genes chr2L 11707187 intergenic not near genes chr2L_8_11705001 chr2L_11705001 RAL-367 167 chr2L 11713508 11713538 chr2L 11720975 11721006 blood 7 7468 2.0 2.0 2.0 2.3 7498 chr2L 11713508 intergenic not near genes chr2L 11717257 intergenic not near genes chr2L 11721006 intergenic CR44143 + chr2L_7_11715001 chr2L_11715001 RAL-367 168 chr2L 11752864 11752893 chr2L 11753154 11753183 6 290 5.5 6.0 5.8 0.9 319 chr2L 11752864 intergenic CG42470 - chr2L 11753024 3` UTR CG42470 - chr2L 11753183 3` UTR CG42470 - chr2L_6_11750001 chr2L_11750001 RAL-367 169 chr2L 11928025 11928049 chr2L 11928110 11928140 9 89 3.5 2.5 3.0 2.2 115 chr2L 11928025 intron Pde1c - chr2L 11928082 intron Pde1c - chr2L 11928140 intron Pde1c - chr2L_9_11925001 chr2L_11925001 RAL-367 170 chr2L 12192358 12192364 chr2L 12192483 12192489 4 125 2.5 1.5 2.0 1.3 131 chr2L 12192358 intron aret + chr2L 12192424 intron aret + chr2L 12192489 intron aret + chr2L_4_12190001 chr2L_12190001 RAL-367 171 chr2L 12264636 12264655 chr2L 12264727 12264746 5 91 0.0 2.0 1.0 2.5 110 chr2L 12264636 intron aret + chr2L 12264691 intron aret + chr2L 12264746 intron aret + chr2L_5_12260001 chr2L_12260001 RAL-367 172 chr2L 12300504 12300527 chr2L 12301167 12301190 7 663 1.5 3.0 2.2 2.2 686 chr2L 12300504 intron aret + chr2L 12300847 intron aret + chr2L 12301190 intron aret + chr2L_7_12300001 chr2L_12300001 RAL-367 173 chr2L 12373139 12373170 chr2L 12373228 12373259 10 89 1.0 4.0 2.5 2.9 120 chr2L 12373139 intron bru-2 + chr2L 12373199 intron bru-2 + chr2L 12373259 intron bru-2 + chr2L_10_12370001 chr2L_12370001 RAL-367 174 chr2L 12481382 12481392 chr2L 12481464 12481474 4 82 3.5 0.5 2.0 1.3 92 chr2L 12481382 intron bun - chr2L 12481428 intron bun - chr2L 12481474 intron bun - chr2L_4_12480001 chr2L_12480001 RAL-367 175 chr2L 12487888 12487918 chr2L 12487969 12487999 7 81 2.0 3.5 2.8 1.8 111 chr2L 12487888 intron bun - chr2L 12487944 intron bun - chr2L 12487999 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-367 176 chr2L 12558324 12558353 chr2L 12565453 12565482 HMS-Beagle 5 7129 1.5 2.0 1.8 1.8 7158 chr2L 12558324 intergenic not near genes chr2L 12561903 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_5_12560001 chr2L_12560001 RAL-367 177 chr2L 12728935 12728945 chr2L 12729178 12729188 pogo 4 243 2.0 5.0 3.5 0.9 253 chr2L 12728935 intron MRP + chr2L 12729062 intron MRP + chr2L 12729188 exon MRP + chr2L_4_12725001 chr2L_12725001 RAL-367 178 chr2L 12731056 12731088 chr2L 12735823 12735855 F-element 5 4767 2.5 2.0 2.2 1.6 4799 chr2L 12731056 intron MRP + chr2L 12733456 intron MRP + chr2L 12735855 intron MRP + chr2L_5_12730001 chr2L_12730001 RAL-367 179 chr2L 12739174 12739205 chr2L 12743955 12743986 Doc 6 4781 2.5 3.0 2.8 1.6 4812 chr2L 12739174 exon MRP + chr2L 12741580 intron MRP + chr2L 12743986 exon MRP + chr2L_6_12740001 chr2L_12740001 RAL-367 180 chr2L 12759207 12759236 chr2L 12759302 12759331 13 93 2.0 3.5 2.8 3.4 124 chr2L 12759207 intergenic not near genes chr2L 12759269 intergenic not near genes chr2L 12759331 intergenic not near genes chr2L_13_12755001 chr2L_12755001 RAL-367 181 chr2L 12781796 12781807 chr2L 12789246 12789257 Quasimodo 5 7450 6.0 4.5 5.2 0.8 7461 chr2L 12781796 intergenic not near genes chr2L 12785526 intergenic not near genes chr2L 12789257 intergenic not near genes chr2L_5_12785001 chr2L_12785001 RAL-367 182 chr2L 12791614 12791628 chr2L 12795289 12795302 F-element 4 3674 1.0 3.0 2.0 1.3 3688 chr2L 12791614 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795302 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-367 183 chr2L 12861696 12861729 chr2L 12863163 12863196 hobo 7 1467 2.0 2.5 2.2 2.2 1500 chr2L 12861696 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863196 intergenic not near genes chr2L_7_12860001 chr2L_12860001 RAL-367 184 chr2L 12894023 12894053 chr2L 12895490 12895520 hobo 7 1467 1.5 2.5 2.0 2.3 1497 chr2L 12894023 intergenic not near genes chr2L 12894772 intergenic not near genes chr2L 12895520 intergenic not near genes chr2L_7_12890001 chr2L_12890001 RAL-367 185 chr2L 12905478 12905498 chr2L 12905562 12905582 5 84 2.0 0.5 1.2 2.3 104 chr2L 12905478 intergenic not near genes chr2L 12905530 intergenic not near genes chr2L 12905582 intergenic not near genes chr2L_5_12905001 chr2L_12905001 RAL-367 186 chr2L 12945983 12946008 chr2L 12946063 12946085 8 80 3.5 3.5 3.5 1.8 102 chr2L 12945983 intergenic not near genes chr2L 12946034 intergenic not near genes chr2L 12946085 intergenic not near genes chr2L_8_12945001 chr2L_12945001 RAL-367 187 chr2L 12963804 12963818 chr2L 12963905 12963920 8 102 5.0 3.0 4.0 1.6 116 chr2L 12963804 intergenic not near genes chr2L 12963862 intergenic not near genes chr2L 12963920 intergenic not near genes chr2L_8_12960001 chr2L_12960001 RAL-367 188 chr2L 13080120 13080154 chr2L 13080200 13080234 10 80 2.5 2.5 2.5 2.9 114 chr2L 13080120 intergenic not near genes chr2L 13080177 intergenic not near genes chr2L 13080234 intergenic not near genes chr2L_10_13080001 chr2L_13080001 RAL-367 189 chr2L 13212638 13212647 chr2L 13213573 13213582 5 935 11.5 20.5 16.0 0.3 944 chr2L 13212638 3` UTR kek4 - chr2L 13213110 exon kek4 - chr2L 13213582 exon kek4 - chr2L_5_13210001 chr2L_13210001 RAL-367 190 chr2L 13212582 13212613 chr2L 13214578 13214609 9 1997 11.0 20.5 15.8 0.5 2027 chr2L 13212582 3` UTR kek4 - chr2L 13213596 exon kek4 - chr2L 13214609 exon kek4 - chr2L_9_13210001 chr2L_13210001 RAL-367 191 chr2L 13374330 13374355 chr2L 13374412 13374442 8 83 2.0 3.5 2.8 2.1 112 chr2L 13374330 5` UTR CG6565 + chr2L 13374386 5` UTR CG6565 + chr2L 13374442 5` UTR CG6565 + chr2L_8_13370001 chr2L_13370001 RAL-367 192 chr2L 13405649 13405679 chr2L 13410446 13410474 Doc 8 4797 3.0 4.0 3.5 1.8 4825 chr2L 13405649 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410474 intron CG7110 + chr2L_8_13405001 chr2L_13405001 RAL-367 193 chr2L 13449461 13449496 chr2L 13456897 13456932 Quasimodo 4 7436 1.0 2.0 1.5 1.6 7471 chr2L 13449461 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456932 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-367 194 chr2L 13481450 13481475 chr2L 13482057 13482082 jockey 4 607 2.0 4.0 3.0 1.0 632 chr2L 13481450 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482082 intron CG42784 + chr2L_4_13480001 chr2L_13480001 RAL-367 195 chr2L 13761803 13761827 chr2L 13762914 13762938 Doc 9 1111 5.0 2.0 3.5 2.0 1135 chr2L 13761803 intron TM9SF4 + chr2L 13762370 intron TM9SF4 + chr2L 13762938 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RAL-367 196 chr2L 13800173 13800197 chr2L 13800277 13800292 6 102 2.0 3.0 2.5 1.7 119 chr2L 13800173 intergenic Sec71 + chr2L 13800232 intergenic not near genes chr2L 13800292 intergenic not near genes chr2L_6_13800001 chr2L_13800001 RAL-367 197 chr2L 13853086 13853116 chr2L 13862236 13862266 roo 6 9150 3.0 1.0 2.0 2.0 9180 chr2L 13853086 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-367 198 chr2L 13913590 13913604 chr2L 13913703 13913717 4 113 3.0 2.5 2.8 1.1 127 chr2L 13913590 intergenic not near genes chr2L 13913654 intergenic not near genes chr2L 13913717 intergenic not near genes chr2L_4_13910001 chr2L_13910001 RAL-367 199 chr2L 13936025 13936057 chr2L 13938709 13938741 6 2689 22.0 15.5 18.8 0.3 2716 chr2L 13936025 intron Ance-3 + chr2L 13937383 intron Ance-3 + chr2L 13938741 intron Ance-3 + chr2L_6_13935001 chr2L_13935001 RAL-367 200 chr2L 13987222 13987236 chr2L 13987302 13987317 10 81 3.5 3.0 3.2 2.4 95 chr2L 13987222 intron rk - chr2L 13987270 intron rk - chr2L 13987317 intron rk - chr2L_10_13985001 chr2L_13985001 RAL-367 201 chr2L 14190165 14190176 chr2L 14190736 14190743 6 574 3.5 2.5 3.0 1.5 578 chr2L 14190165 intron Dyrk2 - chr2L 14190454 intron Dyrk2 - chr2L 14190743 intron Dyrk2 - chr2L_6_14190001 chr2L_14190001 RAL-367 202 chr2L 14246291 14246311 chr2L 14246369 14246389 6 78 0.0 0.0 0.0 6.0 98 chr2L 14246291 intergenic not near genes chr2L 14246340 intergenic not near genes chr2L 14246389 intergenic not near genes chr2L_6_14245001 chr2L_14245001 RAL-367 203 chr2L 14248196 14248201 chr2L 14248276 14248281 6 80 4.5 3.0 3.8 1.2 85 chr2L 14248196 intergenic not near genes chr2L 14248238 intergenic not near genes chr2L 14248281 intergenic not near genes chr2L_6_14245001 chr2L_14245001 RAL-367 204 chr2L 14268796 14268798 chr2L 14268879 14268880 4 83 5.5 5.0 5.2 0.6 84 chr2L 14268796 intron wb + chr2L 14268838 intron wb + chr2L 14268880 intron wb + chr2L_4_14265001 chr2L_14265001 RAL-367 205 chr2L 14268803 14268822 chr2L 14268877 14268905 8 81 1.5 5.0 3.2 1.9 102 chr2L 14268803 intron wb + chr2L 14268854 intron wb + chr2L 14268905 intron wb + chr2L_8_14265001 chr2L_14265001 RAL-367 206 chr2L 14271489 14271515 chr2L 14271579 14271605 6 90 2.0 1.5 1.8 2.1 116 chr2L 14271489 intron wb + chr2L 14271547 intron wb + chr2L 14271605 intron wb + chr2L_6_14270001 chr2L_14270001 RAL-367 207 chr2L 14378650 14378668 chr2L 14378729 14378747 5 79 1.0 0.5 0.8 2.8 97 chr2L 14378650 3` UTR ppk - chr2L 14378698 3` UTR ppk - chr2L 14378747 3` UTR ppk - chr2L_5_14375001 chr2L_14375001 RAL-367 208 chr2L 14554164 14554198 chr2L 14554241 14554275 7 77 2.0 2.0 2.0 2.3 111 chr2L 14554164 intergenic not near genes chr2L 14554220 intergenic not near genes chr2L 14554275 intergenic not near genes chr2L_7_14550001 chr2L_14550001 RAL-367 209 chr2L 14580612 14580643 chr2L 14580770 14580801 7 157 3.5 1.5 2.5 2.0 189 chr2L 14580612 intergenic not near genes chr2L 14580706 intergenic not near genes chr2L 14580801 intergenic not near genes chr2L_7_14580001 chr2L_14580001 RAL-367 210 chr2L 14588383 14588417 chr2L 14588537 14588571 9 151 1.0 3.5 2.2 2.8 188 chr2L 14588383 intergenic CG42680 - chr2L 14588477 intergenic CG42680 - chr2L 14588571 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 RAL-367 211 chr2L 14601976 14602003 chr2L 14602059 14602087 9 84 2.5 2.0 2.2 2.8 111 chr2L 14601976 exon osp - chr2L 14602032 intron osp - chr2L 14602087 intron osp - chr2L_9_14600001 chr2L_14600001 RAL-367 212 chr2L 14641404 14641436 chr2L 14641483 14641515 5 79 3.5 1.5 2.5 1.4 111 chr2L 14641404 intron osp - chr2L 14641460 intron osp - chr2L 14641515 intron osp - chr2L_5_14640001 chr2L_14640001 RAL-367 213 chr2L 14768939 14768949 chr2L 14769016 14769027 4 78 0.0 0.5 0.2 3.3 88 chr2L 14768939 intergenic not near genes chr2L 14768983 intergenic not near genes chr2L 14769027 intergenic not near genes chr2L_4_14765001 chr2L_14765001 RAL-367 214 chr2L 14803879 14803911 chr2L 14809082 14809114 copia 10 5201 3.0 4.0 3.5 2.2 5235 chr2L 14803879 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809114 intergenic not near genes chr2L_10_14805001 chr2L_14805001 RAL-367 215 chr2L 14840992 14841007 chr2L 14841079 14841094 5 87 0.0 3.0 1.5 2.0 102 chr2L 14840992 3` UTR CR43805 - chr2L 14841043 3` UTR CR43805 - chr2L 14841094 3` UTR CR43805 - chr2L_5_14840001 chr2L_14840001 RAL-367 216 chr2L 14920276 14920307 chr2L 14920361 14920392 8 84 1.0 1.5 1.2 3.6 116 chr2L 14920276 intron CG42313 - chr2L 14920334 intron CG42313 - chr2L 14920392 intron CG42313 - chr2L_8_14920001 chr2L_14920001 RAL-367 217 chr2L 14950455 14950481 chr2L 14950930 14950951 12 473 3.0 2.0 2.5 3.4 496 chr2L 14950455 intron CG42313 - chr2L 14950703 intron CG42313 - chr2L 14950951 intron CG42313 - chr2L_12_14950001 chr2L_14950001 RAL-367 218 chr2L 15078084 15078102 chr2L 15078172 15078190 4 88 0.0 3.0 1.5 1.6 106 chr2L 15078084 intron CG15270 + chr2L 15078137 intron CG15270 + chr2L 15078190 intron CG15270 + chr2L_4_15075001 chr2L_15075001 RAL-367 219 chr2L 15161257 15161272 chr2L 15161393 15161408 8 136 0.5 1.5 1.0 4.0 151 chr2L 15161257 intergenic CR44770 + chr2L 15161332 intergenic CR44770 + chr2L 15161408 intergenic CR44770 +,CG4168 - chr2L_8_15160001 chr2L_15160001 RAL-367 220 chr2L 15527438 15527456 chr2L 15527515 15527535 4 78 0.0 2.0 1.0 2.0 97 chr2L 15527438 intergenic not near genes chr2L 15527486 intergenic not near genes chr2L 15527535 intergenic not near genes chr2L_4_15525001 chr2L_15525001 RAL-367 221 chr2L 15586409 15586438 chr2L 15593461 15593490 297 5 7052 2.0 1.5 1.8 1.8 7081 chr2L 15586409 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593490 intergenic not near genes chr2L_5_15585001 chr2L_15585001 RAL-367 222 chr2L 15776548 15776578 chr2L 15776986 15777016 6 440 19.0 9.5 14.2 0.4 468 chr2L 15776548 exon CG43760 - chr2L 15776782 5` UTR CG43760 - chr2L 15777016 intergenic CG43760 - chr2L_6_15775001 chr2L_15775001 RAL-367 223 chr2L 15823357 15823371 chr2L 15823432 15823447 4 76 3.5 2.5 3.0 1.0 90 chr2L 15823357 intergenic CR44601 - chr2L 15823402 intergenic CR44601 - chr2L 15823447 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-367 224 chr2L 15956028 15956053 chr2L 15957495 15957495 hobo 5 1462 4.0 4.0 4.0 1.0 1467 chr2L 15956028 intron beat-Ib - chr2L 15956762 intron beat-Ib - chr2L 15957495 intron beat-Ib - chr2L_5_15955001 chr2L_15955001 RAL-367 225 chr2L 15987505 15987538 chr2L 15987809 15987842 10 304 3.0 0.0 1.5 4.0 337 chr2L 15987505 intergenic not near genes chr2L 15987674 intergenic not near genes chr2L 15987842 intergenic not near genes chr2L_10_15985001 chr2L_15985001 RAL-367 226 chr2L 16058126 16058151 chr2L 16058267 16058292 5 141 0.5 0.5 0.5 3.3 166 chr2L 16058126 intron beat-Ia + chr2L 16058209 intron beat-Ia + chr2L 16058292 intron beat-Ia + chr2L_5_16055001 chr2L_16055001 RAL-367 227 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 4 145889 17.0 17.0 17.0 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-367 228 chr2L 9084340 9084340 chr2L 16217660 16217660 4 7133320 14.0 17.0 15.5 0.2 7133320 chr2L 9084340 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-367 229 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 17.0 17.0 17.0 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-367 230 chr2L 16243771 16243790 chr2L 16243849 16243868 5 78 2.5 1.0 1.8 1.8 97 chr2L 16243771 exon CG42818 + chr2L 16243820 exon CG42818 + chr2L 16243868 exon CG42818 + chr2L_5_16240001 chr2L_16240001 RAL-367 231 chr2L 16280255 16280278 chr2L 16281426 16281448 1360 7 1170 4.5 6.0 5.2 1.1 1193 chr2L 16280255 intron crp - chr2L 16280852 intron crp - chr2L 16281448 intron crp - chr2L_7_16280001 chr2L_16280001 RAL-367 232 chr2L 16320893 16320910 chr2L 16320975 16320980 4 79 0.5 1.0 0.8 2.2 87 chr2L 16320893 intron cact - chr2L 16320936 intron cact - chr2L 16320980 intron cact - chr2L_4_16320001 chr2L_16320001 RAL-367 233 chr2L 16381838 16381860 chr2L 16382076 16382098 8 237 2.5 0.5 1.5 3.2 260 chr2L 16381838 intergenic not near genes chr2L 16381968 intergenic not near genes chr2L 16382098 intergenic not near genes chr2L_8_16380001 chr2L_16380001 RAL-367 234 chr2L 16469525 16469542 chr2L 16469601 16469618 5 76 1.5 7.0 4.2 1.0 93 chr2L 16469525 intron dac - chr2L 16469572 intron dac - chr2L 16469618 intron dac - chr2L_5_16465001 chr2L_16465001 RAL-367 235 chr2L 16511965 16511996 chr2L 16519079 16519110 HMS-Beagle 4 7114 0.5 1.5 1.0 2.0 7145 chr2L 16511965 intron CG5953 - chr2L 16515538 intron CG5953 - chr2L 16519110 intron CG5953 - chr2L_4_16515001 chr2L_16515001 RAL-367 236 chr2L 16716948 16716979 chr2L 16717065 16717094 9 116 0.5 2.5 1.5 3.6 146 chr2L 16716948 intron Cyt-c-d + chr2L 16717021 intron Cyt-c-d + chr2L 16717094 intron Cyt-c-d + chr2L_9_16715001 chr2L_16715001 RAL-367 237 chr2L 16798098 16798130 chr2L 16798402 16798434 10 304 1.0 0.0 0.5 6.7 336 chr2L 16798098 exon Ugt36Bb + chr2L 16798266 exon Ugt36Bb + chr2L 16798434 intergenic Ugt36Bb + chr2L_10_16795001 chr2L_16795001 RAL-367 238 chr2L 16940004 16940013 chr2L 16940082 16940091 4 78 1.0 3.0 2.0 1.3 87 chr2L 16940004 intergenic not near genes chr2L 16940048 intergenic not near genes chr2L 16940091 intergenic not near genes chr2L_4_16940001 chr2L_16940001 RAL-367 239 chr2L 16952694 16952717 chr2L 16952803 16952826 4 107 0.5 4.0 2.2 1.2 132 chr2L 16952694 intergenic not near genes chr2L 16952760 intergenic not near genes chr2L 16952826 intergenic not near genes chr2L_4_16950001 chr2L_16950001 RAL-367 240 chr2L 17005412 17005435 chr2L 17005509 17005532 8 97 1.5 2.0 1.8 2.9 120 chr2L 17005412 intergenic not near genes chr2L 17005472 intergenic not near genes chr2L 17005532 intergenic not near genes chr2L_8_17005001 chr2L_17005001 RAL-367 241 chr2L 17053281 17053306 chr2L 17053691 17053711 8 409 1.0 3.0 2.0 2.7 430 chr2L 17053281 intergenic not near genes chr2L 17053496 intergenic not near genes chr2L 17053711 intergenic not near genes chr2L_8_17050001 chr2L_17050001 RAL-367 242 chr2L 17131438 17131454 chr2L 17131515 17131531 5 77 5.5 0.5 3.0 1.2 93 chr2L 17131438 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L 17131484 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L 17131531 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L_5_17130001 chr2L_17130001 RAL-367 243 chr2L 17199158 17199183 chr2L 17200625 17200650 hobo 5 1467 5.0 2.0 3.5 1.1 1492 chr2L 17199158 intron beat-IIIc - chr2L 17199904 intron beat-IIIc - chr2L 17200650 intron beat-IIIc - chr2L_5_17195001 chr2L_17195001 RAL-367 244 chr2L 17216693 17216723 chr2L 17216899 17216929 8 205 1.0 2.0 1.5 3.2 236 chr2L 17216693 intron beat-IIIc - chr2L 17216811 intron beat-IIIc - chr2L 17216929 intron beat-IIIc - chr2L_8_17215001 chr2L_17215001 RAL-367 245 chr2L 17273195 17273225 chr2L 17277978 17277997 F-element 7 4781 4.0 5.0 4.5 1.3 4802 chr2L 17273195 intergenic not near genes chr2L 17275596 intergenic not near genes chr2L 17277997 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-367 246 chr2L 17300889 17300917 chr2L 17301131 17301159 6 242 1.0 1.0 1.0 3.0 270 chr2L 17300889 intergenic not near genes chr2L 17301024 intergenic not near genes chr2L 17301159 intergenic not near genes chr2L_6_17300001 chr2L_17300001 RAL-367 247 chr2L 17303437 17303470 chr2L 17303615 17303627 10 172 3.0 4.0 3.5 2.2 190 chr2L 17303437 intergenic not near genes chr2L 17303532 intergenic not near genes chr2L 17303627 intergenic not near genes chr2L_10_17300001 chr2L_17300001 RAL-367 248 chr2L 17432642 17432667 chr2L 17432714 17432744 8 74 0.5 5.0 2.8 2.1 102 chr2L 17432642 intron Dif - chr2L 17432693 intron Dif - chr2L 17432744 intron Dif - chr2L_8_17430001 chr2L_17430001 RAL-367 249 chr2L 17466423 17466457 chr2L 17466516 17466550 7 93 0.0 1.5 0.8 3.9 127 chr2L 17466423 intron BicD - chr2L 17466486 intron BicD - chr2L 17466550 intron BicD - chr2L_7_17465001 chr2L_17465001 RAL-367 250 chr2L 17503226 17503252 chr2L 17503303 17503323 7 76 4.5 3.0 3.8 1.5 97 chr2L 17503226 intron Dhc36C + chr2L 17503274 intron Dhc36C + chr2L 17503323 intron Dhc36C + chr2L_7_17500001 chr2L_17500001 RAL-367 251 chr2L 17727767 17727789 chr2L 17729456 17729478 hobo 4 1689 3.5 2.0 2.8 1.1 1711 chr2L 17727767 intron CadN - chr2L 17728622 intron CadN - chr2L 17729478 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-367 252 chr2L 17880013 17880024 chr2L 17880100 17880111 6 87 2.5 4.0 3.2 1.4 98 chr2L 17880013 intergenic not near genes chr2L 17880062 intergenic not near genes chr2L 17880111 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-367 253 chr2L 17911964 17911987 chr2L 17914142 17914165 pogo 9 2178 5.0 2.5 3.8 1.9 2201 chr2L 17911964 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914165 intergenic CG43271 - chr2L_9_17910001 chr2L_17910001 RAL-367 254 chr2L 17944135 17944142 chr2L 17944213 17944220 4 78 3.5 2.5 3.0 1.0 85 chr2L 17944135 intergenic not near genes chr2L 17944178 intergenic not near genes chr2L 17944220 intergenic not near genes chr2L_4_17940001 chr2L_17940001 RAL-367 255 chr2L 18002109 18002135 chr2L 18002272 18002298 5 161 3.0 1.5 2.2 1.6 189 chr2L 18002109 intergenic not near genes chr2L 18002204 intergenic not near genes chr2L 18002298 intergenic not near genes chr2L_5_18000001 chr2L_18000001 RAL-367 256 chr2L 18026986 18027004 chr2L 18027326 18027344 6 340 3.5 3.0 3.2 1.4 358 chr2L 18026986 5` UTR rdo + chr2L 18027165 intron rdo + chr2L 18027344 intron rdo + chr2L_6_18025001 chr2L_18025001 RAL-367 257 chr2L 18044246 18044278 chr2L 18044574 18044606 6 328 2.5 1.5 2.0 2.0 360 chr2L 18044246 intron rdo + chr2L 18044426 intron rdo + chr2L 18044606 intron rdo + chr2L_6_18040001 chr2L_18040001 RAL-367 258 chr2L 18051875 18051881 chr2L 18061022 18061028 roo 4 9147 7.0 1.5 4.2 0.8 9153 chr2L 18051875 intron rdo + chr2L 18056452 intron rdo + chr2L 18061028 intron rdo + chr2L_4_18055001 chr2L_18055001 RAL-367 259 chr2L 18274050 18274063 chr2L 18274136 18274149 6 86 3.5 2.5 3.0 1.5 99 chr2L 18274050 intron CG42750 - chr2L 18274100 intron CG42750 - chr2L 18274149 intron CG42750 - chr2L_6_18270001 chr2L_18270001 RAL-367 260 chr2L 18291531 18291562 chr2L 18291629 18291660 5 98 0.5 0.0 0.2 4.2 129 chr2L 18291531 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291596 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291660 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_5_18290001 chr2L_18290001 RAL-367 261 chr2L 18303974 18303993 chr2L 18304065 18304081 5 90 1.5 0.5 1.0 2.5 107 chr2L 18303974 intergenic not near genes chr2L 18304028 intergenic not near genes chr2L 18304081 intergenic not near genes chr2L_5_18300001 chr2L_18300001 RAL-367 262 chr2L 18408024 18408045 chr2L 18412808 18412829 Doc 8 4784 1.5 0.0 0.8 4.4 4805 chr2L 18408024 intergenic not near genes chr2L 18410426 intergenic not near genes chr2L 18412829 intergenic not near genes chr2L_8_18410001 chr2L_18410001 RAL-367 263 chr2L 18584757 18584863 chr2L 18584842 18585141 8 108 4.0 4.0 4.0 1.6 384 chr2L 18584757 intron Pde11 - chr2L 18584949 intron Pde11 - chr2L 18585141 intron Pde11 - chr2L_8_18580001 chr2L_18580001 RAL-367 264 chr2L 18584864 18584892 chr2L 18585142 18585170 7 275 3.0 4.5 3.8 1.5 306 chr2L 18584864 intron Pde11 - chr2L 18585017 intron Pde11 - chr2L 18585170 intron Pde11 - chr2L_7_18585001 chr2L_18585001 RAL-367 265 chr2L 18675657 18675688 chr2L 18675736 18675767 6 79 2.5 4.5 3.5 1.3 110 chr2L 18675657 exon Mst36Fa - chr2L 18675712 exon Mst36Fa - chr2L 18675767 exon Mst36Fa - chr2L_6_18675001 chr2L_18675001 RAL-367 266 chr2L 18812559 18812590 chr2L 18812822 18812853 8 263 2.0 1.5 1.8 2.9 294 chr2L 18812559 intergenic CG17325 +,CG42305 + chr2L 18812706 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812853 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_8_18810001 chr2L_18810001 RAL-367 267 chr2L 18847894 18847923 chr2L 18848305 18848334 8 410 3.5 1.5 2.5 2.3 440 chr2L 18847894 intron CG17321 + chr2L 18848114 intron CG17321 + chr2L 18848334 intron CG17321 + chr2L_8_18845001 chr2L_18845001 RAL-367 268 chr2L 18898397 18898420 chr2L 18898479 18898502 6 80 0.0 2.0 1.0 3.0 105 chr2L 18898397 intergenic not near genes chr2L 18898450 intergenic not near genes chr2L 18898502 intergenic not near genes chr2L_6_18895001 chr2L_18895001 RAL-367 269 chr2L 18926578 18926592 chr2L 18926685 18926699 5 107 3.0 1.0 2.0 1.7 121 chr2L 18926578 intron ssp3 - chr2L 18926638 intron ssp3 - chr2L 18926699 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-367 270 chr2L 19070268 19070300 chr2L 19070361 19070393 9 93 3.0 0.5 1.8 3.2 125 chr2L 19070268 intergenic CG10702 - chr2L 19070330 intergenic CG10702 - chr2L 19070393 intergenic not near genes chr2L_9_19070001 chr2L_19070001 RAL-367 271 chr2L 19147369 19147397 chr2L 19154404 19154432 297 4 7035 4.0 2.5 3.2 1.0 7063 chr2L 19147369 intron brat + chr2L 19150900 intron brat + chr2L 19154432 intron brat + chr2L_4_19150001 chr2L_19150001 RAL-367 272 chr2L 19268769 19268794 chr2L 19268875 19268891 8 105 3.5 1.5 2.5 2.3 122 chr2L 19268769 intergenic CR44190 - chr2L 19268830 intergenic CR44190 - chr2L 19268891 intergenic CR44190 - chr2L_8_19265001 chr2L_19265001 RAL-367 273 chr2L 19345016 19345044 chr2L 19357225 19357253 blood 9 12209 2.5 4.0 3.2 2.1 12237 chr2L 19345016 intron dnt - chr2L 19351134 intron dnt - chr2L 19357253 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-367 274 chr2L 19357553 19357562 chr2L 19357642 19357651 5 90 5.5 6.0 5.8 0.7 98 chr2L 19357553 intron dnt - chr2L 19357602 intron dnt - chr2L 19357651 intron dnt - chr2L_5_19355001 chr2L_19355001 RAL-367 275 chr2L 19384001 19384018 chr2L 19384102 19384119 6 100 1.5 1.5 1.5 2.4 118 chr2L 19384001 exon fon - chr2L 19384060 exon fon - chr2L 19384119 exon fon - chr2L_6_19380001 chr2L_19380001 RAL-367 276 chr2L 19407721 19407738 chr2L 19407917 19407935 6 197 6.5 3.5 5.0 1.0 214 chr2L 19407721 intron Pax - chr2L 19407828 intron Pax - chr2L 19407935 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-367 277 chr2L 19441071 19441089 chr2L 19441148 19441160 4 76 1.0 6.5 3.8 0.8 89 chr2L 19441071 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441160 5` UTR CG10237 - chr2L_4_19440001 chr2L_19440001 RAL-367 278 chr2L 19558516 19558548 chr2L 19558620 19558652 9 104 3.0 0.5 1.8 3.2 136 chr2L 19558516 intron Tep5 + chr2L 19558584 intron Tep5 + chr2L 19558652 intron Tep5 + chr2L_9_19555001 chr2L_19555001 RAL-367 279 chr2L 19560005 19560034 chr2L 19560258 19560286 6 250 1.5 1.5 1.5 2.4 281 chr2L 19560005 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560286 intron Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-367 280 chr2L 19560833 19560864 chr2L 19560913 19560944 10 80 4.0 0.0 2.0 3.3 111 chr2L 19560833 intron Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560944 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-367 281 chr2L 19561343 19561367 chr2L 19561484 19561508 6 140 2.5 1.0 1.8 2.1 165 chr2L 19561343 exon Tep5 + chr2L 19561426 exon Tep5 + chr2L 19561508 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-367 282 chr2L 19620093 19620119 chr2L 19621082 19621089 jockey 6 984 4.5 3.5 4.0 1.2 996 chr2L 19620093 intron Lar + chr2L 19620591 intron Lar + chr2L 19621089 intron Lar + chr2L_6_19620001 chr2L_19620001 RAL-367 283 chr2L 19638532 19638572 chr2L 19638620 19638660 9 88 1.0 1.0 1.0 4.5 128 chr2L 19638532 intron Lar + chr2L 19638596 intron Lar + chr2L 19638660 intron Lar + chr2L_9_19635001 chr2L_19635001 RAL-367 284 chr2L 19652569 19652599 chr2L 19674005 19674030 opus 5 21435 1.0 1.5 1.2 2.3 21461 chr2L 19652569 intron Lar + chr2L 19663300 intron Lar + chr2L 19674030 intron Lar + chr2L_5_19660001 chr2L_19660001 RAL-367 285 chr2L 19687003 19687037 chr2L 19687300 19687334 5 297 4.0 2.0 3.0 1.2 331 chr2L 19687003 intron Lar + chr2L 19687168 intron Lar + chr2L 19687334 intron Lar + chr2L_5_19685001 chr2L_19685001 RAL-367 286 chr2L 19703537 19703569 chr2L 19712673 19712705 roo 13 9135 3.5 1.5 2.5 3.7 9168 chr2L 19703537 intron Lar + chr2L 19708121 intron Lar + chr2L 19712705 intron Lar + chr2L_13_19705001 chr2L_19705001 RAL-367 287 chr2L 19901402 19901426 chr2L 19901594 19901618 5 192 2.5 1.0 1.8 1.8 216 chr2L 19901402 intron sick + chr2L 19901510 intron sick + chr2L 19901618 intron sick + chr2L_5_19900001 chr2L_19900001 RAL-367 288 chr2L 19935247 19935258 chr2L 19935324 19935335 5 75 4.0 5.0 4.5 0.9 88 chr2L 19935247 intron sick + chr2L 19935291 intron sick + chr2L 19935335 intron sick + chr2L_5_19935001 chr2L_19935001 RAL-367 289 chr2L 20272114 20272137 chr2L 20282825 20282848 copia 4 10711 0.5 2.0 1.2 1.8 10734 chr2L 20272114 intergenic not near genes chr2L 20277481 intergenic not near genes chr2L 20282848 intergenic not near genes chr2L_4_20275001 chr2L_20275001 RAL-367 290 chr2L 20296517 20296539 chr2L 20296598 20296620 4 81 2.0 1.0 1.5 1.6 103 chr2L 20296517 intergenic CR43414 - chr2L 20296568 intergenic CR43414 - chr2L 20296620 intergenic CR43414 - chr2L_4_20295001 chr2L_20295001 RAL-367 291 chr2L 20298830 20298852 chr2L 20298913 20298935 11 83 2.0 3.0 2.5 3.1 105 chr2L 20298830 intergenic not near genes chr2L 20298882 intergenic not near genes chr2L 20298935 intergenic not near genes chr2L_11_20295001 chr2L_20295001 RAL-367 292 chr2L 20299411 20299443 chr2L 20299534 20299560 13 123 0.5 3.0 1.8 4.6 149 chr2L 20299411 intergenic not near genes chr2L 20299486 intergenic not near genes chr2L 20299560 intergenic not near genes chr2L_13_20295001 chr2L_20295001 RAL-367 293 chr2L 20389336 20389350 chr2L 20389406 20389431 5 79 0.0 1.0 0.5 3.3 95 chr2L 20389336 intron CG10947 - chr2L 20389384 intron CG10947 - chr2L 20389431 intron CG10947 - chr2L_5_20385001 chr2L_20385001 RAL-367 294 chr2L 20498692 20498703 chr2L 20498791 20498802 4 99 4.0 4.5 4.2 0.8 110 chr2L 20498692 intergenic not near genes chr2L 20498747 intergenic not near genes chr2L 20498802 intergenic not near genes chr2L_4_20495001 chr2L_20495001 RAL-367 295 chr2L 20524188 20524193 chr2L 20524270 20524275 4 82 0.5 0.0 0.2 3.3 87 chr2L 20524188 intergenic not near genes chr2L 20524232 intergenic not near genes chr2L 20524275 intergenic not near genes chr2L_4_20520001 chr2L_20520001 RAL-367 296 chr2L 20549134 20549155 chr2L 20549216 20549237 4 82 1.5 1.0 1.2 1.8 103 chr2L 20549134 intergenic not near genes chr2L 20549186 intergenic not near genes chr2L 20549237 intergenic not near genes chr2L_4_20545001 chr2L_20545001 RAL-367 297 chr2L 20568665 20568686 chr2L 20569055 20569076 X-element 4 390 0.5 2.0 1.2 1.8 411 chr2L 20568665 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569076 intron CR45347 + chr2L_4_20565001 chr2L_20565001 RAL-367 298 chr2L 20576218 20576249 chr2L 20583686 20583717 blood 9 7468 6.5 0.5 3.5 2.0 7499 chr2L 20576218 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583717 3` UTR CR44909 - chr2L_9_20575001 chr2L_20575001 RAL-367 299 chr2L 20607638 20607670 chr2L 20607717 20607741 7 78 0.5 2.0 1.2 3.2 103 chr2L 20607638 intron,3` UTR CR44909 -,CR43608 - chr2L 20607690 intron,3` UTR CR44909 -,CR43608 - chr2L 20607741 intron,3` UTR CR44909 -,CR43608 - chr2L_7_20605001 chr2L_20605001 RAL-367 300 chr2L 20639517 20639525 chr2L 20639793 20639801 INE-1 5 276 2.5 4.0 3.2 1.2 284 chr2L 20639517 intergenic not near genes chr2L 20639659 intergenic CG31680 + chr2L 20639801 intergenic CG31680 + chr2L_5_20635001 chr2L_20635001 RAL-367 301 chr2L 20668696 20668717 chr2L 20668772 20668793 4 76 2.5 6.5 4.5 0.7 97 chr2L 20668696 intron CG31678 - chr2L 20668744 intron CG31678 - chr2L 20668793 intron CG31678 - chr2L_4_20665001 chr2L_20665001 RAL-367 302 chr2L 20687085 20687106 chr2L 20687164 20687184 5 79 0.5 3.0 1.8 1.8 99 chr2L 20687085 intron Hr38 - chr2L 20687134 intron Hr38 - chr2L 20687184 intron Hr38 - chr2L_5_20685001 chr2L_20685001 RAL-367 303 chr2L 20739864 20739885 chr2L 20753996 20754017 Tirant 10 14133 27.0 21.0 24.0 0.4 14153 chr2L 20739864 3` UTR Fs(2)Ket + chr2L 20746940 intron Fs(2)Ket + chr2L 20754017 exon Ns4 + chr2L_10_20745001 chr2L_20745001 RAL-367 304 chr2L 20818248 20818280 chr2L 20818675 20818707 7 427 3.5 2.5 3.0 1.8 459 chr2L 20818248 intron CheB38a - chr2L 20818478 exon CheB38a - chr2L 20818707 intergenic CheB38a - chr2L_7_20815001 chr2L_20815001 RAL-367 305 chr2L 20819121 20819144 chr2L 20819205 20819228 6 84 2.5 2.5 2.5 1.7 107 chr2L 20819121 intergenic not near genes chr2L 20819174 intergenic not near genes chr2L 20819228 intergenic not near genes chr2L_6_20815001 chr2L_20815001 RAL-367 306 chr2L 20821508 20821521 chr2L 20821656 20821669 5 146 1.5 2.5 2.0 1.7 161 chr2L 20821508 intergenic not near genes chr2L 20821588 intergenic not near genes chr2L 20821669 intergenic not near genes chr2L_5_20820001 chr2L_20820001 RAL-367 307 chr2L 20823115 20823146 chr2L 20823191 20823222 9 76 2.5 2.0 2.2 2.8 107 chr2L 20823115 5` UTR CG9331 + chr2L 20823168 5` UTR CG9331 + chr2L 20823222 intron CG9331 + chr2L_9_20820001 chr2L_20820001 RAL-367 308 chr2L 20845809 20845833 chr2L 20846142 20846166 8 330 2.0 0.5 1.2 3.6 357 chr2L 20845809 intron CG31676 + chr2L 20845988 intron CG31676 + chr2L 20846166 intron CG31676 + chr2L_8_20845001 chr2L_20845001 RAL-367 309 chr2L 20848168 20848195 chr2L 20848244 20848271 5 76 1.0 1.0 1.0 2.5 103 chr2L 20848168 intron CG31676 + chr2L 20848220 intron CG31676 + chr2L 20848271 intron CG31676 + chr2L_5_20845001 chr2L_20845001 RAL-367 310 chr2L 20852305 20852438 chr2L 20852372 20852519 6 78 2.5 2.5 2.5 1.7 214 chr2L 20852305 intergenic twit + chr2L 20852412 intergenic twit + chr2L 20852519 intergenic twit + chr2L_6_20850001 chr2L_20850001 RAL-367 311 chr2L 20891539 20891546 chr2L 20896640 20896647 jockey 4 5101 1.5 4.0 2.8 1.1 5108 chr2L 20891539 intron,intron CG43739 -,sky - chr2L 20894093 intron,intron CG43739 -,sky - chr2L 20896647 intron,intron CG43739 -,sky - chr2L_4_20890001 chr2L_20890001 RAL-367 312 chr2L 20901471 20901489 chr2L 20902635 20902653 1360 4 1164 0.0 0.5 0.2 3.3 1182 chr2L 20901471 intron,intron CG43739 -,sky - chr2L 20902062 intron,intron CG43739 -,sky - chr2L 20902653 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-367 313 chr2L 20991037 20991067 chr2L 20991114 20991145 6 77 3.0 2.5 2.8 1.6 108 chr2L 20991037 intron CG42238 - chr2L 20991091 intron CG42238 - chr2L 20991145 intron CG42238 - chr2L_6_20990001 chr2L_20990001 RAL-367 314 chr2L 21001525 21001545 chr2L 21001608 21001624 8 79 2.5 4.0 3.2 1.9 99 chr2L 21001525 intron CG42238 - chr2L 21001574 intron CG42238 - chr2L 21001624 intron CG42238 - chr2L_8_21000001 chr2L_21000001 RAL-367 315 chr2L 21020277 21020311 chr2L 21023954 21023988 NOF 9 3677 3.0 2.5 2.8 2.4 3711 chr2L 21020277 intron CG42238 - chr2L 21022132 intron CG42238 - chr2L 21023988 intron CG42238 - chr2L_9_21020001 chr2L_21020001 RAL-367 316 chr2L 21041135 21041166 chr2L 21049396 21049426 Tirant 8 8260 2.0 3.0 2.5 2.3 8291 chr2L 21041135 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049426 intron CG42238 - chr2L_8_21045001 chr2L_21045001 RAL-367 317 chr2L 21199225 21199257 chr2L 21199302 21199333 7 77 1.0 1.5 1.2 3.2 108 chr2L 21199225 intergenic CG31624 -,Ret - chr2L 21199279 3` UTR CG31624 - chr2L 21199333 3` UTR CG31624 - chr2L_7_21195001 chr2L_21195001 RAL-367 318 chr2L 21246517 21246541 chr2L 21246605 21246636 6 94 0.5 3.5 2.0 2.0 119 chr2L 21246517 intron Hr39 + chr2L 21246576 intron Hr39 + chr2L 21246636 intron Hr39 + chr2L_6_21245001 chr2L_21245001 RAL-367 319 chr2L 21274254 21274289 chr2L 21274349 21274384 7 94 0.5 2.5 1.5 2.8 130 chr2L 21274254 exon CG8671 + chr2L 21274319 exon CG8671 + chr2L 21274384 exon CG8671 + chr2L_7_21270001 chr2L_21270001 RAL-367 320 chr2L 21286606 21286631 chr2L 21286685 21286710 4 78 1.0 1.0 1.0 2.0 104 chr2L 21286606 exon Mio - chr2L 21286658 intron Mio - chr2L 21286710 intron Mio - chr2L_4_21285001 chr2L_21285001 RAL-367 321 chr2L 21333623 21333646 chr2L 21333768 21333790 7 145 0.5 2.5 1.5 2.8 167 chr2L 21333623 intron dimm + chr2L 21333706 intron dimm + chr2L 21333790 intron dimm + chr2L_7_21330001 chr2L_21330001 RAL-367 322 chr2L 21355603 21355625 chr2L 21355748 21355755 4 141 1.0 0.5 0.8 2.2 152 chr2L 21355603 intron Tsp39D + chr2L 21355679 intron Tsp39D + chr2L 21355755 intron Tsp39D + chr2L_4_21355001 chr2L_21355001 RAL-367 323 chr2L 16800602 16800604 chr2L 21646989 21646991 4 4846387 4.5 5.0 4.8 0.7 4846389 chr2L 16800602 exon Ugt36Bc + chr2L 19223796 intergenic not near genes chr2L 21646991 3` UTR Ac3 + chr2L_4_19220001 chr2L_19220001 RAL-367 324 chr2L 21831821 21831848 chr2L 21831922 21831949 6 101 4.5 1.0 2.8 1.6 128 chr2L 21831821 intron tsh + chr2L 21831885 intron tsh + chr2L 21831949 intron tsh + chr2L_6_21830001 chr2L_21830001 RAL-367 325 chr2L 21832492 21832519 chr2L 21832749 21832776 12 257 2.0 4.0 3.0 3.0 284 chr2L 21832492 intron tsh + chr2L 21832634 intron tsh + chr2L 21832776 intron tsh + chr2L_12_21830001 chr2L_21830001 RAL-367 326 chr2L 21855474 21855514 chr2L 21855560 21855601 6 86 0.5 3.0 1.8 2.1 127 chr2L 21855474 intron CR44917 + chr2L 21855538 intron CR44917 + chr2L 21855601 intron CR44917 + chr2L_6_21855001 chr2L_21855001 RAL-367 327 chr2L 21859323 21859350 chr2L 21859403 21859430 8 78 3.5 2.0 2.8 2.1 107 chr2L 21859323 intron CR44917 + chr2L 21859376 intron CR44917 + chr2L 21859430 intron CR44917 + chr2L_8_21855001 chr2L_21855001 RAL-367 328 chr2L 21981689 21981710 chr2L 21990854 21990871 roo 6 9163 2.5 6.5 4.5 1.1 9182 chr2L 21981689 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990871 exon CG2528 - chr2L_6_21985001 chr2L_21985001 RAL-367 329 chr2L 22077288 22077308 chr2L 22077369 22077389 6 81 1.5 3.5 2.5 1.7 101 chr2L 22077288 intergenic not near genes chr2L 22077338 intergenic not near genes chr2L 22077389 intergenic not near genes chr2L_6_22075001 chr2L_22075001 RAL-367 330 chr2L 22558140 22558160 chr2L 22558216 22558236 6 76 3.0 0.5 1.8 2.1 96 chr2L 22558140 intergenic not near genes chr2L 22558188 intergenic not near genes chr2L 22558236 intergenic not near genes chr2L_6_22555001 chr2L_22555001 RAL-367 331 chr2L 22558389 22558420 chr2L 22558700 22558731 8 311 0.5 1.5 1.0 4.0 342 chr2L 22558389 intergenic not near genes chr2L 22558560 intergenic not near genes chr2L 22558731 intergenic not near genes chr2L_8_22555001 chr2L_22555001 RAL-367 332 chr2L 22719434 22719449 chr2L 22727557 22727572 gypsy2 6 8123 4.0 0.0 2.0 2.0 8138 chr2L 22719434 intron CG40006 - chr2L 22723503 intron CG40006 - chr2L 22727572 intron CG40006 - chr2L_6_22720001 chr2L_22720001 RAL-367 333 chr2L 22941254 22941281 chr2L 22941336 22941343 7 78 1.0 2.5 1.8 2.5 89 chr2L 22941254 3` UTR lt + chr2L 22941298 3` UTR lt + chr2L 22941343 3` UTR lt + chr2L_7_22940001 chr2L_22940001 RAL-367 334 chr2L 23006509 23006532 chr2L 23007183 23007199 Osvaldo 10 674 1.5 3.5 2.5 2.9 690 chr2L 23006509 intron Cht3 - chr2L 23006854 intron Cht3 - chr2L 23007199 intron Cht3 - chr2L_10_23005001 chr2L_23005001 RAL-367 335 chr2R 3144092 3144110 chr2R 3393370 3393388 Doc 5 249276 10.5 9.5 10.0 0.5 249296 chr2R 3144092 intron CG42596 + chr2R 3268740 intergenic not near genes chr2R 3393388 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-367 336 chr2R 3291818 3292099 chr2R 3914992 3915260 5 623167 6.0 15.5 10.8 0.4 623442 chr2R 3291818 intergenic not near genes chr2R 3603539 intergenic not near genes chr2R 3915260 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-367 337 chr2R 4580194 4580227 chr2R 4580821 4580854 6 627 2.5 1.5 2.0 2.0 660 chr2R 4580194 intergenic not near genes chr2R 4580524 intergenic not near genes chr2R 4580854 intergenic not near genes chr2R_6_4580001 chr2R_4580001 RAL-367 338 chr2R 4604556 4604581 chr2R 4604635 4604660 6 79 2.0 1.5 1.8 2.1 104 chr2R 4604556 intron p120ctn + chr2R 4604608 intron p120ctn + chr2R 4604660 intron p120ctn + chr2R_6_4600001 chr2R_4600001 RAL-367 339 chr2R 4622950 4622988 chr2R 4624109 4624147 1360 12 1159 5.0 1.0 3.0 3.0 1197 chr2R 4622950 intergenic CR44101 - chr2R 4623548 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_12_4620001 chr2R_4620001 RAL-367 340 chr2R 4656788 4656803 chr2R 4656990 4657013 7 205 17.5 11.0 14.2 0.5 225 chr2R 4656788 intergenic not near genes chr2R 4656900 intergenic not near genes chr2R 4657013 intergenic not near genes chr2R_7_4655001 chr2R_4655001 RAL-367 341 chr2R 4819844 4819874 chr2R 4819933 4819962 8 89 2.0 3.0 2.5 2.3 118 chr2R 4819844 exon CG17528 - chr2R 4819903 exon CG17528 - chr2R 4819962 intron CG17528 - chr2R_8_4815001 chr2R_4815001 RAL-367 342 chr2R 5019289 5019310 chr2R 5019369 5019396 5 85 0.0 1.5 0.8 2.8 107 chr2R 5019289 intron Ir41a + chr2R 5019342 intron Ir41a + chr2R 5019396 intron Ir41a + chr2R_5_5015001 chr2R_5015001 RAL-367 343 chr2R 5075222 5075234 chr2R 5075350 5075362 5 127 5.0 0.0 2.5 1.4 140 chr2R 5075222 intergenic not near genes chr2R 5075292 intergenic not near genes chr2R 5075362 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-367 344 chr2R 5075355 5075368 chr2R 5075771 5075784 4 416 0.0 4.0 2.0 1.3 429 chr2R 5075355 intergenic not near genes chr2R 5075570 intergenic not near genes chr2R 5075784 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-367 345 chr2R 5080797 5080818 chr2R 5080882 5080909 5 85 2.0 2.0 2.0 1.7 112 chr2R 5080797 intergenic not near genes chr2R 5080853 intergenic not near genes chr2R 5080909 intergenic not near genes chr2R_5_5080001 chr2R_5080001 RAL-367 346 chr2R 5125264 5125271 chr2R 5125586 5125593 4 322 1.5 2.0 1.8 1.4 329 chr2R 5125264 intron gus - chr2R 5125428 intron gus - chr2R 5125593 intron gus - chr2R_4_5125001 chr2R_5125001 RAL-367 347 chr2R 5209782 5209812 chr2R 5210314 5210329 8 530 1.5 0.5 1.0 4.0 547 chr2R 5209782 intron Nipped-A - chr2R 5210056 intron Nipped-A - chr2R 5210329 intron Nipped-A - chr2R_8_5210001 chr2R_5210001 RAL-367 348 chr2R 5303495 5303507 chr2R 5303583 5303595 5 88 12.5 9.0 10.8 0.4 100 chr2R 5303495 intergenic not near genes chr2R 5303545 intergenic not near genes chr2R 5303595 intergenic not near genes chr2R_5_5300001 chr2R_5300001 RAL-367 349 chr2R 5472366 5472392 chr2R 5472459 5472487 9 91 4.0 3.5 3.8 1.9 121 chr2R 5472366 intron CG30440 - chr2R 5472426 intron CG30440 - chr2R 5472487 intron CG30440 - chr2R_9_5470001 chr2R_5470001 RAL-367 350 chr2R 5476354 5476372 chr2R 5476898 5476916 6 544 4.5 3.5 4.0 1.2 562 chr2R 5476354 intron CG30440 - chr2R 5476635 intron CG30440 - chr2R 5476916 intron CG30440 - chr2R_6_5475001 chr2R_5475001 RAL-367 351 chr2R 5491716 5491749 chr2R 5491857 5491890 8 141 0.0 2.0 1.0 4.0 174 chr2R 5491716 intron CG30440 - chr2R 5491803 intron CG30440 - chr2R 5491890 intron CG30440 - chr2R_8_5490001 chr2R_5490001 RAL-367 352 chr2R 5581399 5581411 chr2R 5627608 5627620 6 46209 0.0 6.5 3.2 1.4 46221 chr2R 5581399 intergenic not near genes chr2R 5604510 exon Fis1 - chr2R 5627620 intergenic not near genes chr2R_6_5600001 chr2R_5600001 RAL-367 353 chr2R 5697802 5697830 chr2R 5697880 5697909 4 79 0.5 1.0 0.8 2.2 107 chr2R 5697802 intergenic CG17337 + chr2R 5697856 intergenic CG17337 + chr2R 5697909 5` UTR CG17337 + chr2R_4_5695001 chr2R_5695001 RAL-367 354 chr2R 5772528 5772549 chr2R 5772622 5772627 8 89 0.0 0.5 0.2 6.7 99 chr2R 5772528 3` UTR Gp210 + chr2R 5772578 3` UTR Gp210 + chr2R 5772627 3` UTR Gp210 + chr2R_8_5770001 chr2R_5770001 RAL-367 355 chr2R 5772839 5772854 chr2R 5772921 5772936 5 82 2.0 2.5 2.2 1.6 97 chr2R 5772839 3` UTR Gp210 + chr2R 5772888 3` UTR Gp210 + chr2R 5772936 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-367 356 chr2R 5859981 5860013 chr2R 5860093 5860125 10 111 2.5 3.0 2.8 2.6 144 chr2R 5859981 3` UTR dpr12 + chr2R 5860053 3` UTR dpr12 + chr2R 5860125 3` UTR dpr12 + chr2R_10_5860001 chr2R_5860001 RAL-367 357 chr2R 5869275 5869297 chr2R 5874351 5874364 flea 6 5074 2.5 1.5 2.0 2.0 5089 chr2R 5869275 intergenic not near genes chr2R 5871820 intergenic not near genes chr2R 5874364 intergenic not near genes chr2R_6_5870001 chr2R_5870001 RAL-367 358 chr2R 5945797 5945834 chr2R 5945890 5945927 4 93 0.5 1.5 1.0 2.0 130 chr2R 5945797 intergenic not near genes chr2R 5945862 intergenic not near genes chr2R 5945927 intergenic not near genes chr2R_4_5945001 chr2R_5945001 RAL-367 359 chr2R 6050304 6050318 chr2R 6050396 6050410 7 93 2.0 0.0 1.0 3.5 106 chr2R 6050304 intergenic CG34212 - chr2R 6050357 intergenic CG34212 - chr2R 6050410 intergenic CG34212 - chr2R_7_6050001 chr2R_6050001 RAL-367 360 chr2R 6096717 6096744 chr2R 6101915 6101923 BS 7 5193 4.5 2.0 3.2 1.7 5206 chr2R 6096717 intron EcR - chr2R 6099320 intron EcR - chr2R 6101923 intron EcR - chr2R_7_6095001 chr2R_6095001 RAL-367 361 chr2R 6173549 6173577 chr2R 6173627 6173651 11 77 0.5 2.5 1.5 4.4 102 chr2R 6173549 intergenic Cyp6w1 + chr2R 6173600 intergenic Cyp6w1 + chr2R 6173651 intergenic Cyp6w1 + chr2R_11_6170001 chr2R_6170001 RAL-367 362 chr2R 6494527 6494545 chr2R 6499289 6499307 F-element 5 4762 5.5 1.5 3.5 1.1 4780 chr2R 6494527 intergenic not near genes chr2R 6496917 intergenic not near genes chr2R 6499307 intergenic not near genes chr2R_5_6495001 chr2R_6495001 RAL-367 363 chr2R 6500957 6500986 chr2R 6501052 6501081 14 94 3.5 5.0 4.2 2.7 124 chr2R 6500957 intergenic not near genes chr2R 6501019 intergenic not near genes chr2R 6501081 intergenic not near genes chr2R_14_6500001 chr2R_6500001 RAL-367 364 chr2R 6633199 6633224 chr2R 6633276 6633301 5 75 2.0 2.5 2.2 1.6 102 chr2R 6633199 intergenic Vha16-1 -,Trap1 - chr2R 6633250 intergenic Vha16-1 -,Trap1 - chr2R 6633301 intergenic Vha16-1 -,Trap1 - chr2R_5_6630001 chr2R_6630001 RAL-367 365 chr2R 6646801 6646825 chr2R 6647074 6647098 6 273 1.0 1.0 1.0 3.0 297 chr2R 6646801 intergenic not near genes chr2R 6646950 intergenic not near genes chr2R 6647098 intergenic not near genes chr2R_6_6645001 chr2R_6645001 RAL-367 366 chr2R 6706967 6706996 chr2R 6707228 6707257 4 261 1.5 2.5 2.0 1.3 290 chr2R 6706967 intron,intron CG3409 -,CG45092 - chr2R 6707112 intron,intron CG3409 -,CG45092 - chr2R 6707257 intron,intron,3` UTR CG3409 -,CG45092 -,mir-4975 - chr2R_4_6705001 chr2R_6705001 RAL-367 367 chr2R 6712585 6712601 chr2R 6712682 6712697 4 97 1.5 2.5 2.0 1.3 112 chr2R 6712585 intron,intron CG3409 -,CG45092 - chr2R 6712641 intron,intron CG3409 -,CG45092 - chr2R 6712697 intron,intron CG3409 -,CG45092 - chr2R_4_6710001 chr2R_6710001 RAL-367 368 chr2R 7101613 7101649 chr2R 7101708 7101720 9 92 3.5 0.0 1.8 3.2 107 chr2R 7101613 intron esn + chr2R 7101666 intron esn + chr2R 7101720 intron esn + chr2R_9_7100001 chr2R_7100001 RAL-367 369 chr2R 7235821 7235850 chr2R 7240913 7240942 jockey 5 5092 2.5 2.0 2.2 1.6 5121 chr2R 7235821 intergenic not near genes chr2R 7238382 intergenic not near genes chr2R 7240942 intergenic not near genes chr2R_5_7235001 chr2R_7235001 RAL-367 370 chr2R 7411307 7411338 chr2R 7411393 7411424 6 86 0.5 5.5 3.0 1.5 117 chr2R 7411307 intergenic not near genes chr2R 7411366 intergenic not near genes chr2R 7411424 intergenic not near genes chr2R_6_7410001 chr2R_7410001 RAL-367 371 chr2R 7434900 7434918 chr2R 7439201 7439219 Juan 4 4301 1.5 4.0 2.8 1.1 4319 chr2R 7434900 intergenic so + chr2R 7437060 intergenic not near genes chr2R 7439219 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-367 372 chr2R 7608411 7608435 chr2R 7613614 7613638 I-element 8 5202 0.5 0.5 0.5 5.3 5227 chr2R 7608411 intron CG1358 - chr2R 7611024 intron CG1358 - chr2R 7613638 intron CG1358 - chr2R_8_7610001 chr2R_7610001 RAL-367 373 chr2R 7743481 7743505 chr2R 7743562 7743586 9 81 3.0 1.0 2.0 3.0 105 chr2R 7743481 intron,intron CG30497 -,CG45093 - chr2R 7743534 intron,intron CG30497 -,CG45093 - chr2R 7743586 intron,intron CG30497 -,CG45093 - chr2R_9_7740001 chr2R_7740001 RAL-367 374 chr2R 7869197 7869222 chr2R 7873983 7874008 Doc 5 4786 3.0 5.0 4.0 1.0 4811 chr2R 7869197 intron Dgk - chr2R 7871602 intron Dgk - chr2R 7874008 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-367 375 chr2R 7892174 7892182 chr2R 7892379 7892406 4 219 2.5 0.5 1.5 1.6 232 chr2R 7892174 intron CG30377 + chr2R 7892290 intron CG30377 + chr2R 7892406 intron CG30377 + chr2R_4_7890001 chr2R_7890001 RAL-367 376 chr2R 7916427 7916457 chr2R 7916512 7916542 7 83 2.0 2.5 2.2 2.2 115 chr2R 7916427 5` UTR CG12159 - chr2R 7916484 intergenic CG12159 -,Cul1 + chr2R 7916542 intergenic CG12159 -,Cul1 + chr2R_7_7915001 chr2R_7915001 RAL-367 377 chr2R 8015663 8015683 chr2R 8017686 8017706 6 2022 2.0 2.5 2.2 1.9 2043 chr2R 8015663 intergenic mir-4981 + chr2R 8016684 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-367 378 chr2R 8067069 8067097 chr2R 8067153 8067166 7 82 0.5 4.5 2.5 2.0 97 chr2R 8067069 intron CG17977 - chr2R 8067118 intron CG17977 - chr2R 8067166 exon CG17977 - chr2R_7_8065001 chr2R_8065001 RAL-367 379 chr2R 8089255 8089286 chr2R 8089341 8089372 5 86 0.0 1.5 0.8 2.8 117 chr2R 8089255 3` UTR sut2 + chr2R 8089314 intergenic sut2 +,sut3 + chr2R 8089372 intergenic sut2 +,sut3 + chr2R_5_8085001 chr2R_8085001 RAL-367 380 chr2R 8160934 8160953 chr2R 8161024 8161043 1360 5 90 3.0 6.5 4.8 0.9 109 chr2R 8160934 intron CG8708 - chr2R 8160988 intron CG8708 - chr2R 8161043 intron CG8708 - chr2R_5_8160001 chr2R_8160001 RAL-367 381 chr2R 8166542 8166552 chr2R 8168731 8168748 6 2191 21.0 15.0 18.0 0.3 2206 chr2R 8166542 exon Rs1 + chr2R 8167645 exon Rs1 + chr2R 8168748 exon Gasz + chr2R_6_8165001 chr2R_8165001 RAL-367 382 chr2R 8203760 8203776 chr2R 8203852 8203867 6 92 0.5 1.0 0.8 3.3 107 chr2R 8203760 intron LRP1 + chr2R 8203814 intron LRP1 + chr2R 8203867 intron LRP1 + chr2R_6_8200001 chr2R_8200001 RAL-367 383 chr2R 8368187 8368223 chr2R 8368267 8368293 5 78 1.0 2.0 1.5 2.0 106 chr2R 8368187 intron pdm3 + chr2R 8368240 intron pdm3 + chr2R 8368293 intron pdm3 + chr2R_5_8365001 chr2R_8365001 RAL-367 384 chr2R 8398227 8398242 chr2R 8402987 8403023 Doc 7 4778 2.5 2.5 2.5 2.0 4796 chr2R 8398227 intron CG2121 - chr2R 8400625 intron CG2121 - chr2R 8403023 intron CG2121 - chr2R_7_8400001 chr2R_8400001 RAL-367 385 chr2R 8511613 8511633 chr2R 8511693 8511713 8 79 5.0 2.0 3.5 1.8 100 chr2R 8511613 intron mtt - chr2R 8511663 intron mtt - chr2R 8511713 intron mtt - chr2R_8_8510001 chr2R_8510001 RAL-367 386 chr2R 8524069 8524104 chr2R 8524151 8524186 5 82 1.0 2.5 1.8 1.8 117 chr2R 8524069 intron mtt - chr2R 8524128 intron mtt - chr2R 8524186 intron mtt - chr2R_5_8520001 chr2R_8520001 RAL-367 387 chr2R 8636593 8636619 chr2R 8637181 8637207 7 587 2.5 2.5 2.5 2.0 614 chr2R 8636593 intergenic not near genes chr2R 8636900 intergenic not near genes chr2R 8637207 intergenic not near genes chr2R_7_8635001 chr2R_8635001 RAL-367 388 chr2R 8658239 8658256 chr2R 8658315 8658332 4 75 3.0 2.5 2.8 1.1 93 chr2R 8658239 intron ptc + chr2R 8658286 intron ptc + chr2R 8658332 intron ptc + chr2R_4_8655001 chr2R_8655001 RAL-367 389 chr2R 8722762 8722792 chr2R 8723003 8723033 pogo 7 241 3.0 2.0 2.5 2.0 271 chr2R 8722762 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723033 intron CG14767 - chr2R_7_8720001 chr2R_8720001 RAL-367 390 chr2R 8768198 8768218 chr2R 8768276 8768296 4 78 2.0 2.5 2.2 1.2 98 chr2R 8768198 intergenic CR44278 - chr2R 8768247 intergenic CR44278 - chr2R 8768296 3` UTR CR44278 - chr2R_4_8765001 chr2R_8765001 RAL-367 391 chr2R 8789459 8789494 chr2R 8789541 8789561 6 78 0.0 3.0 1.5 2.4 102 chr2R 8789459 intergenic not near genes chr2R 8789510 intergenic not near genes chr2R 8789561 intergenic not near genes chr2R_6_8785001 chr2R_8785001 RAL-367 392 chr2R 9212701 9212712 chr2R 9213186 9213198 roo 5 486 4.0 3.0 3.5 1.1 497 chr2R 9212701 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213198 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-367 393 chr2R 9212717 9212726 chr2R 9213183 9213212 roo 4 481 3.0 3.0 3.0 1.0 495 chr2R 9212717 intergenic CR45309 + chr2R 9212964 intergenic CR45309 + chr2R 9213212 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-367 394 chr2R 9281521 9281544 chr2R 9281597 9281619 5 76 3.5 1.0 2.2 1.6 98 chr2R 9281521 intron Pkn - chr2R 9281570 intron Pkn - chr2R 9281619 intron Pkn - chr2R_5_9280001 chr2R_9280001 RAL-367 395 chr2R 9322373 9322398 chr2R 9322451 9322476 6 76 3.0 2.0 2.5 1.7 103 chr2R 9322373 intron,intron CG13739 -,CG13954 - chr2R 9322424 intron,intron CG13739 -,CG13954 - chr2R 9322476 intron,intron CG13739 -,CG13954 - chr2R_6_9320001 chr2R_9320001 RAL-367 396 chr2R 9368137 9368148 chr2R 9368213 9368224 6 75 2.0 0.5 1.2 2.7 87 chr2R 9368137 intron CG13954 - chr2R 9368180 intron CG13954 - chr2R 9368224 intron CG13954 - chr2R_6_9365001 chr2R_9365001 RAL-367 397 chr2R 9408231 9408252 chr2R 9408314 9408335 7 83 3.5 2.0 2.8 1.8 104 chr2R 9408231 intron wun - chr2R 9408283 intron wun - chr2R 9408335 intron wun - chr2R_7_9405001 chr2R_9405001 RAL-367 398 chr2R 9510665 9510694 chr2R 9510780 9510810 12 116 3.5 0.5 2.0 4.0 145 chr2R 9510665 intron brp + chr2R 9510738 intron brp + chr2R 9510810 intron brp + chr2R_12_9510001 chr2R_9510001 RAL-367 399 chr2R 9871041 9871065 chr2R 9871527 9871545 roo 7 485 2.5 3.5 3.0 1.8 504 chr2R 9871041 intron cbx - chr2R 9871293 intron cbx - chr2R 9871545 intron,5` UTR cbx -,CG18446 + chr2R_7_9870001 chr2R_9870001 RAL-367 400 chr2R 9940755 9940782 chr2R 9940837 9940864 5 82 1.5 2.0 1.8 1.8 109 chr2R 9940755 5` UTR Mef2 - chr2R 9940810 5` UTR Mef2 - chr2R 9940864 5` UTR Mef2 - chr2R_5_9940001 chr2R_9940001 RAL-367 401 chr2R 9945429 9945471 chr2R 9945625 9945637 BS 8 192 2.5 1.5 2.0 2.7 208 chr2R 9945429 intron Mef2 - chr2R 9945533 intron Mef2 - chr2R 9945637 intron Mef2 - chr2R_8_9945001 chr2R_9945001 RAL-367 402 chr2R 9975920 9975944 chr2R 9976032 9976058 11 114 1.5 1.0 1.2 5.0 138 chr2R 9975920 intergenic not near genes chr2R 9975989 intergenic not near genes chr2R 9976058 intergenic not near genes chr2R_11_9975001 chr2R_9975001 RAL-367 403 chr2R 10005856 10005858 chr2R 10007021 10007023 1360 4 1165 8.5 4.5 6.5 0.5 1167 chr2R 10005856 intron Pka-R2 - chr2R 10006440 intron Pka-R2 - chr2R 10007023 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-367 404 chr2R 10017660 10017680 chr2R 10017739 10017753 5 76 2.0 2.0 2.0 1.7 93 chr2R 10017660 intron Pka-R2 - chr2R 10017706 intron Pka-R2 - chr2R 10017753 intron Pka-R2 - chr2R_5_10015001 chr2R_10015001 RAL-367 405 chr2R 10086921 10086933 chr2R 10087018 10087030 4 97 2.5 1.5 2.0 1.3 109 chr2R 10086921 intron,exon CG2269 +,sut4 - chr2R 10086976 intron,5` UTR CG2269 +,sut4 - chr2R 10087030 intron,5` UTR CG2269 +,sut4 - chr2R_4_10085001 chr2R_10085001 RAL-367 406 chr2R 10132202 10132220 chr2R 10132282 10132300 10 80 2.0 3.0 2.5 2.9 98 chr2R 10132202 intron gem + chr2R 10132251 intron gem + chr2R 10132300 intron gem + chr2R_10_10130001 chr2R_10130001 RAL-367 407 chr2R 10171121 10171140 chr2R 10171198 10171224 6 82 1.0 2.5 1.8 2.1 103 chr2R 10171121 intron KCNQ - chr2R 10171172 intron KCNQ - chr2R 10171224 intron KCNQ - chr2R_6_10170001 chr2R_10170001 RAL-367 408 chr2R 10313323 10313349 chr2R 10313411 10313437 4 88 0.5 3.0 1.8 1.4 114 chr2R 10313323 intergenic not near genes chr2R 10313380 intergenic not near genes chr2R 10313437 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-367 409 chr2R 10363870 10363898 chr2R 10363949 10363977 4 79 2.5 2.0 2.2 1.2 107 chr2R 10363870 intron CG42732 - chr2R 10363924 intron CG42732 - chr2R 10363977 intron CG42732 - chr2R_4_10360001 chr2R_10360001 RAL-367 410 chr2R 10385229 10385254 chr2R 10385339 10385339 8 106 0.5 1.5 1.0 4.0 110 chr2R 10385229 intron CG42732 - chr2R 10385284 intron CG42732 - chr2R 10385339 intron CG42732 - chr2R_8_10385001 chr2R_10385001 RAL-367 411 chr2R 10457307 10457327 chr2R 10457392 10457412 4 85 1.5 3.0 2.2 1.2 105 chr2R 10457307 intron,intron Galphao +,Cyp49a1 - chr2R 10457360 intron,intron Galphao +,Cyp49a1 - chr2R 10457412 intron,intron Galphao +,Cyp49a1 - chr2R_4_10455001 chr2R_10455001 RAL-367 412 chr2R 10469023 10469052 chr2R 10469149 10469178 8 126 6.0 2.5 4.2 1.5 155 chr2R 10469023 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469178 intron CG11777 + chr2R_8_10465001 chr2R_10465001 RAL-367 413 chr2R 10622351 10622366 chr2R 10637115 10637130 mdg1 4 14764 0.0 0.0 0.0 4.0 14779 chr2R 10622351 intron CG11883 + chr2R 10629740 intron CG11883 + chr2R 10637130 intron CG11883 + chr2R_4_10625001 chr2R_10625001 RAL-367 414 chr2R 10644061 10644080 chr2R 10644139 10644158 5 78 1.0 0.5 0.8 2.8 97 chr2R 10644061 intron Git - chr2R 10644110 intron Git - chr2R 10644158 intron Git - chr2R_5_10640001 chr2R_10640001 RAL-367 415 chr2R 10693853 10693880 chr2R 10693935 10693962 5 77 2.5 3.0 2.8 1.3 109 chr2R 10693853 intron stan + chr2R 10693908 intron stan + chr2R 10693962 intron stan + chr2R_5_10690001 chr2R_10690001 RAL-367 416 chr2R 10698093 10698107 chr2R 10698171 10698185 8 78 7.5 1.5 4.5 1.5 92 chr2R 10698093 intron stan + chr2R 10698139 intron stan + chr2R 10698185 intron stan + chr2R_8_10695001 chr2R_10695001 RAL-367 417 chr2R 10784703 10784725 chr2R 10784786 10784808 9 82 3.5 5.0 4.2 1.7 105 chr2R 10784703 intron,5` UTR CG33144 -,CR44299 + chr2R 10784756 intron,5` UTR CG33144 -,CR44299 + chr2R 10784808 intron,5` UTR CG33144 -,CR44299 + chr2R_9_10780001 chr2R_10780001 RAL-367 418 chr2R 10827334 10827352 chr2R 10827422 10827424 6 85 4.5 1.5 3.0 1.5 90 chr2R 10827334 exon CG12325 + chr2R 10827379 3` UTR CG12325 + chr2R 10827424 3` UTR CG12325 + chr2R_6_10825001 chr2R_10825001 RAL-367 419 chr2R 10948027 10948060 chr2R 10955578 10955608 17.6 6 7548 0.5 3.0 1.8 2.1 7581 chr2R 10948027 intergenic not near genes chr2R 10951818 intergenic not near genes chr2R 10955608 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-367 420 chr2R 11009814 11009846 chr2R 11018988 11019020 roo 12 9171 2.0 5.0 3.5 2.7 9206 chr2R 11009814 intron luna - chr2R 11014417 intron luna - chr2R 11019020 intron luna - chr2R_12_11010001 chr2R_11010001 RAL-367 421 chr2R 11019878 11019910 chr2R 11024944 11024976 jockey 8 5064 2.0 4.5 3.2 1.9 5098 chr2R 11019878 intron luna - chr2R 11022427 intron luna - chr2R 11024976 intron luna - chr2R_8_11020001 chr2R_11020001 RAL-367 422 chr2R 11039749 11039759 chr2R 11039811 11039817 5 61 3.5 0.5 2.0 1.7 68 chr2R 11039749 intron luna - chr2R 11039783 intron luna - chr2R 11039817 intron luna - chr2R_5_11035001 chr2R_11035001 RAL-367 423 chr2R 11207827 11207843 chr2R 11208013 11208036 BS 8 192 4.5 0.5 2.5 2.3 209 chr2R 11207827 intron shn + chr2R 11207932 intron shn + chr2R 11208036 intron shn + chr2R_8_11205001 chr2R_11205001 RAL-367 424 chr2R 11292976 11292993 chr2R 11293049 11293072 7 78 2.5 0.0 1.2 3.2 96 chr2R 11292976 exon,3` UTR dare -,CG30033 + chr2R 11293024 5` UTR,3` UTR dare -,CG30033 + chr2R 11293072 5` UTR,3` UTR dare -,CG30033 + chr2R_7_11290001 chr2R_11290001 RAL-367 425 chr2R 11336581 11336611 chr2R 11336664 11336694 5 83 0.5 2.0 1.2 2.3 113 chr2R 11336581 intergenic sha +,lambdaTry + chr2R 11336638 intergenic sha +,lambdaTry + chr2R 11336694 intergenic lambdaTry +,sha + chr2R_5_11335001 chr2R_11335001 RAL-367 426 chr2R 11415535 11415545 chr2R 11418676 11418694 opus 4 3147 2.5 4.0 3.2 1.0 3159 chr2R 11415535 intron Drip - chr2R 11417114 intron Drip - chr2R 11418694 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-367 427 chr2R 11465841 11465868 chr2R 11465926 11465953 5 85 1.0 1.5 1.2 2.3 112 chr2R 11465841 intergenic not near genes chr2R 11465897 intergenic not near genes chr2R 11465953 intergenic not near genes chr2R_5_11465001 chr2R_11465001 RAL-367 428 chr2R 11494600 11494627 chr2R 11494689 11494716 7 89 2.0 4.5 3.2 1.7 116 chr2R 11494600 intron inv + chr2R 11494658 intron inv + chr2R 11494716 intron inv + chr2R_7_11490001 chr2R_11490001 RAL-367 429 chr2R 11636411 11636441 chr2R 11636489 11636519 4 73 0.5 2.5 1.5 1.6 108 chr2R 11636411 intron CG9005 - chr2R 11636465 intron CG9005 - chr2R 11636519 intron CG9005 - chr2R_4_11635001 chr2R_11635001 RAL-367 430 chr2R 11844279 11844299 chr2R 11844363 11844383 9 84 0.0 3.0 1.5 3.6 104 chr2R 11844279 intergenic S2P -,CG43190 +,CR44304 - chr2R 11844331 intergenic CG43190 +,CR44304 -,S2P - chr2R 11844383 5` UTR,3` UTR CG43190 +,CR44304 - chr2R_9_11840001 chr2R_11840001 RAL-367 431 chr2R 11846417 11846445 chr2R 11846746 11846775 12 330 4.0 2.0 3.0 3.0 358 chr2R 11846417 intron Sln + chr2R 11846596 intron Sln + chr2R 11846775 intron Sln + chr2R_12_11845001 chr2R_11845001 RAL-367 432 chr2R 11899691 11899719 chr2R 11899863 11899892 6 173 3.0 0.0 1.5 2.4 201 chr2R 11899691 intron,5` UTR MCPH1 -,Zip48C + chr2R 11899792 intron,5` UTR MCPH1 -,Zip48C + chr2R 11899892 intron,5` UTR MCPH1 -,Zip48C + chr2R_6_11895001 chr2R_11895001 RAL-367 433 chr2R 11909737 11909766 chr2R 11909862 11909891 4 125 1.0 2.5 1.8 1.4 154 chr2R 11909737 intron CG13183 - chr2R 11909814 intron CG13183 - chr2R 11909891 intron CG13183 - chr2R_4_11905001 chr2R_11905001 RAL-367 434 chr2R 12096836 12096854 chr2R 12097288 12097306 5 452 0.5 3.0 1.8 1.8 470 chr2R 12096836 intron jeb - chr2R 12097071 intron jeb - chr2R 12097306 intron jeb - chr2R_5_12095001 chr2R_12095001 RAL-367 435 chr2R 12146469 12146502 chr2R 12147591 12147624 7 1122 22.0 20.0 21.0 0.3 1155 chr2R 12146469 intron,3` UTR Hen1 +,CG8878 - chr2R 12147046 intron,exon Hen1 +,CG8878 - chr2R 12147624 intron,exon Hen1 +,CG8878 - chr2R_7_12145001 chr2R_12145001 RAL-367 436 chr2R 12145908 12145926 chr2R 12148601 12148635 7 2698 26.0 26.5 26.2 0.3 2727 chr2R 12145908 exon Hen1 + chr2R 12147272 intron,intron Hen1 +,CG8878 - chr2R 12148635 intron,exon Hen1 +,CG8878 - chr2R_7_12145001 chr2R_12145001 RAL-367 437 chr2R 12187471 12187508 chr2R 12190087 12190124 24 2619 48.0 46.0 47.0 0.5 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_24_12185001 chr2R_12185001 RAL-367 438 chr2R 12217578 12217602 chr2R 12217659 12217683 4 81 1.0 3.0 2.0 1.3 105 chr2R 12217578 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217683 intergenic not near genes chr2R_4_12215001 chr2R_12215001 RAL-367 439 chr2R 12501706 12501726 chr2R 12503858 12503868 Rt1c 6 2156 4.0 0.5 2.2 1.9 2162 chr2R 12501706 intron fdl - chr2R 12502787 intron fdl - chr2R 12503868 intron fdl - chr2R_6_12500001 chr2R_12500001 RAL-367 440 chr2R 12536003 12536035 chr2R 12536096 12536124 13 92 2.0 5.5 3.8 2.7 121 chr2R 12536003 intron fra + chr2R 12536064 intron fra + chr2R 12536124 intron fra + chr2R_13_12535001 chr2R_12535001 RAL-367 441 chr2R 12597957 12597990 chr2R 12598057 12598090 16 100 4.0 5.5 4.8 2.8 133 chr2R 12597957 intron Amph + chr2R 12598024 intron Amph + chr2R 12598090 intron Amph + chr2R_16_12595001 chr2R_12595001 RAL-367 442 chr2R 12767787 12767815 chr2R 12767863 12767891 8 76 2.5 2.5 2.5 2.3 104 chr2R 12767787 intergenic not near genes chr2R 12767839 intergenic not near genes chr2R 12767891 intergenic not near genes chr2R_8_12765001 chr2R_12765001 RAL-367 443 chr2R 12771326 12771344 chr2R 12771434 12771453 5 109 1.5 1.0 1.2 2.3 127 chr2R 12771326 intergenic not near genes chr2R 12771390 intergenic not near genes chr2R 12771453 intergenic not near genes chr2R_5_12770001 chr2R_12770001 RAL-367 444 chr2R 12819456 12819478 chr2R 12824525 12824547 jockey 5 5069 1.5 8.5 5.0 0.8 5091 chr2R 12819456 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824547 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-367 445 chr2R 13048080 13048111 chr2R 13048162 13048193 5 82 1.0 4.0 2.5 1.4 113 chr2R 13048080 intergenic not near genes chr2R 13048136 intergenic not near genes chr2R 13048193 intergenic not near genes chr2R_5_13045001 chr2R_13045001 RAL-367 446 chr2R 13136839 13136864 chr2R 13141637 13141662 Doc 9 4797 2.5 3.0 2.8 2.4 4823 chr2R 13136839 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141662 intron Cap-G + chr2R_9_13135001 chr2R_13135001 RAL-367 447 chr2R 13431489 13431520 chr2R 13431568 13431599 7 79 0.5 2.5 1.5 2.8 110 chr2R 13431489 intron CG42321 - chr2R 13431544 intron CG42321 - chr2R 13431599 intron CG42321 - chr2R_7_13430001 chr2R_13430001 RAL-367 448 chr2R 13438860 13438885 chr2R 13440178 13440211 10 1319 15.5 25.5 20.5 0.5 1351 chr2R 13438860 5` UTR CG42321 - chr2R 13439536 3` UTR cnn - chr2R 13440211 exon cnn - chr2R_10_13435001 chr2R_13435001 RAL-367 449 chr2R 13447785 13447800 chr2R 13448120 13448141 6 340 3.0 2.5 2.8 1.6 356 chr2R 13447785 intron cnn - chr2R 13447963 intron cnn - chr2R 13448141 intron cnn - chr2R_6_13445001 chr2R_13445001 RAL-367 450 chr2R 13529179 13529217 chr2R 13529395 13529433 5 216 0.5 1.0 0.8 2.8 254 chr2R 13529179 intron Vmat - chr2R 13529306 intron Vmat - chr2R 13529433 intron Vmat - chr2R_5_13525001 chr2R_13525001 RAL-367 451 chr2R 13547083 13547102 chr2R 13547278 13547297 5 195 2.5 1.5 2.0 1.7 214 chr2R 13547083 intron CG6145 - chr2R 13547190 intron CG6145 - chr2R 13547297 intron CG6145 - chr2R_5_13545001 chr2R_13545001 RAL-367 452 chr2R 13632305 13632313 chr2R 13632393 13632399 4 88 4.0 5.5 4.8 0.7 94 chr2R 13632305 intron fas + chr2R 13632352 intron fas + chr2R 13632399 intron fas + chr2R_4_13630001 chr2R_13630001 RAL-367 453 chr2R 13721209 13721229 chr2R 13721292 13721312 7 82 4.0 3.5 3.8 1.5 103 chr2R 13721209 intron fas + chr2R 13721260 intron fas + chr2R 13721312 intron fas + chr2R_7_13720001 chr2R_13720001 RAL-367 454 chr2R 13738905 13738921 chr2R 13738996 13739012 5 91 0.0 0.0 0.0 5.0 107 chr2R 13738905 intron fas + chr2R 13738958 intron fas + chr2R 13739012 intron fas + chr2R_5_13735001 chr2R_13735001 RAL-367 455 chr2R 13768982 13769008 chr2R 13769081 13769103 7 98 1.5 5.0 3.2 1.7 121 chr2R 13768982 intergenic not near genes chr2R 13769042 intergenic not near genes chr2R 13769103 intergenic not near genes chr2R_7_13765001 chr2R_13765001 RAL-367 456 chr2R 13822747 13822778 chr2R 13822823 13822841 6 74 1.0 2.5 1.8 2.1 94 chr2R 13822747 intron fl(2)d - chr2R 13822794 intron fl(2)d - chr2R 13822841 intron fl(2)d - chr2R_6_13820001 chr2R_13820001 RAL-367 457 chr2R 13888760 13888789 chr2R 13888837 13888866 9 76 3.0 0.0 1.5 3.6 106 chr2R 13888760 intron shot - chr2R 13888813 intron shot - chr2R 13888866 intron shot - chr2R_9_13885001 chr2R_13885001 RAL-367 458 chr2R 13925871 13925886 chr2R 13926025 13926040 6 152 1.0 2.0 1.5 2.4 169 chr2R 13925871 intron shot - chr2R 13925956 intron shot - chr2R 13926040 intron shot - chr2R_6_13925001 chr2R_13925001 RAL-367 459 chr2R 14365303 14365325 chr2R 14365383 14365405 7 78 2.5 5.5 4.0 1.4 102 chr2R 14365303 exon Tfb1 + chr2R 14365354 3` UTR Tfb1 + chr2R 14365405 3` UTR Tfb1 + chr2R_7_14365001 chr2R_14365001 RAL-367 460 chr2R 14392885 14392915 chr2R 14392969 14392999 8 84 1.0 2.5 1.8 2.9 114 chr2R 14392885 intergenic not near genes chr2R 14392942 intergenic not near genes chr2R 14392999 intergenic not near genes chr2R_8_14390001 chr2R_14390001 RAL-367 461 chr2R 14393868 14393899 chr2R 14393953 14393984 10 84 4.5 2.5 3.5 2.2 116 chr2R 14393868 intergenic not near genes chr2R 14393926 intergenic not near genes chr2R 14393984 intergenic not near genes chr2R_10_14390001 chr2R_14390001 RAL-367 462 chr2R 14394229 14394245 chr2R 14399018 14399034 Doc 5 4789 3.5 1.5 2.5 1.4 4805 chr2R 14394229 intergenic not near genes chr2R 14396632 intergenic not near genes chr2R 14399034 intergenic not near genes chr2R_5_14395001 chr2R_14395001 RAL-367 463 chr2R 14530779 14530789 chr2R 14530858 14530867 4 79 1.5 3.5 2.5 1.1 88 chr2R 14530779 intron ttv + chr2R 14530823 intron ttv + chr2R 14530867 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-367 464 chr2R 14565557 14565584 chr2R 14565634 14565661 5 77 3.5 2.5 3.0 1.2 104 chr2R 14565557 intron ttv + chr2R 14565609 intron ttv + chr2R 14565661 intron ttv + chr2R_5_14565001 chr2R_14565001 RAL-367 465 chr2R 14661149 14661166 chr2R 14661235 14661252 6 85 3.0 2.0 2.5 1.7 103 chr2R 14661149 intergenic not near genes chr2R 14661200 intergenic not near genes chr2R 14661252 intergenic not near genes chr2R_6_14660001 chr2R_14660001 RAL-367 466 chr2R 14693912 14693939 chr2R 14693996 14694024 8 85 1.0 2.0 1.5 3.2 112 chr2R 14693912 intron mspo - chr2R 14693968 intron mspo - chr2R 14694024 intron mspo - chr2R_8_14690001 chr2R_14690001 RAL-367 467 chr2R 14786182 14786201 chr2R 14786343 14786362 6 161 1.5 0.0 0.8 3.3 180 chr2R 14786182 intron kn - chr2R 14786272 intron kn - chr2R 14786362 intron kn - chr2R_6_14785001 chr2R_14785001 RAL-367 468 chr2R 14816104 14816139 chr2R 14816200 14816231 9 95 3.0 3.5 3.2 2.1 127 chr2R 14816104 intergenic not near genes chr2R 14816168 intergenic not near genes chr2R 14816231 intergenic not near genes chr2R_9_14815001 chr2R_14815001 RAL-367 469 chr2R 14820898 14820929 chr2R 14820985 14821016 8 87 3.5 3.0 3.2 1.9 118 chr2R 14820898 intergenic not near genes chr2R 14820957 intergenic not near genes chr2R 14821016 intergenic not near genes chr2R_8_14820001 chr2R_14820001 RAL-367 470 chr2R 14911713 14911725 chr2R 14911836 14911848 8 123 2.5 2.5 2.5 2.3 135 chr2R 14911713 intron CG10249 - chr2R 14911780 intron CG10249 - chr2R 14911848 intron CG10249 - chr2R_8_14910001 chr2R_14910001 RAL-367 471 chr2R 14917850 14917883 chr2R 14917933 14917968 6 85 2.0 2.0 2.0 2.0 118 chr2R 14917850 intron CG10249 - chr2R 14917909 intron CG10249 - chr2R 14917968 intron CG10249 - chr2R_6_14915001 chr2R_14915001 RAL-367 472 chr2R 14922151 14922170 chr2R 14922227 14922246 6 76 3.0 4.5 3.8 1.2 95 chr2R 14922151 intron CG10249 - chr2R 14922198 intron CG10249 - chr2R 14922246 intron CG10249 - chr2R_6_14920001 chr2R_14920001 RAL-367 473 chr2R 14954746 14954780 chr2R 14954822 14954856 8 76 0.5 0.5 0.5 5.3 110 chr2R 14954746 intron aPKC - chr2R 14954801 intron aPKC - chr2R 14954856 intron aPKC - chr2R_8_14950001 chr2R_14950001 RAL-367 474 chr2R 15004724 15004755 chr2R 15005053 15005075 jockey 11 327 2.5 2.0 2.2 3.4 351 chr2R 15004724 intergenic not near genes chr2R 15004900 intergenic not near genes chr2R 15005075 intergenic not near genes chr2R_11_15000001 chr2R_15000001 RAL-367 475 chr2R 15015460 15015487 chr2R 15022884 15022891 mdg1 7 7420 1.0 2.0 1.5 2.8 7431 chr2R 15015460 intron hbs + chr2R 15019176 intron hbs + chr2R 15022891 intron hbs + chr2R_7_15015001 chr2R_15015001 RAL-367 476 chr2R 15051082 15051109 chr2R 15051164 15051191 8 82 2.5 2.0 2.2 2.5 109 chr2R 15051082 intergenic not near genes chr2R 15051136 intergenic not near genes chr2R 15051191 intergenic not near genes chr2R_8_15050001 chr2R_15050001 RAL-367 477 chr2R 15119318 15119346 chr2R 15127799 15127817 Tirant 7 8479 3.0 3.0 3.0 1.8 8499 chr2R 15119318 intron chn + chr2R 15123568 intron chn + chr2R 15127817 intron chn + chr2R_7_15120001 chr2R_15120001 RAL-367 478 chr2R 15133437 15133457 chr2R 15133554 15133574 6 117 0.5 1.0 0.8 3.3 137 chr2R 15133437 intron chn + chr2R 15133506 intron chn + chr2R 15133574 intron chn + chr2R_6_15130001 chr2R_15130001 RAL-367 479 chr2R 15296159 15296167 chr2R 15296242 15296250 4 83 2.0 4.0 3.0 1.0 91 chr2R 15296159 intron Trpm - chr2R 15296204 intron Trpm - chr2R 15296250 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-367 480 chr2R 15472053 15472063 chr2R 15472137 15472147 4 84 0.0 1.5 0.8 2.2 94 chr2R 15472053 intergenic CG8180 -,CG43729 + chr2R 15472100 intergenic CG8180 -,CG43729 + chr2R 15472147 intergenic CG8180 -,CG43729 + chr2R_4_15470001 chr2R_15470001 RAL-367 481 chr2R 15534681 15534698 chr2R 15534760 15534777 4 79 1.0 0.5 0.8 2.2 96 chr2R 15534681 intron CG30471 + chr2R 15534729 intron CG30471 + chr2R 15534777 intron CG30471 + chr2R_4_15530001 chr2R_15530001 RAL-367 482 chr2R 15685368 15685383 chr2R 15685466 15685486 5 102 4.0 2.0 3.0 1.2 118 chr2R 15685368 intron,exon Ranbp11 +,CG30082 - chr2R 15685427 intron,intron Ranbp11 +,CG30082 - chr2R 15685486 intron,intron Ranbp11 +,CG30082 - chr2R_5_15685001 chr2R_15685001 RAL-367 483 chr2R 15704306 15704323 chr2R 15704711 15704728 5 405 5.5 3.0 4.2 1.0 422 chr2R 15704306 intergenic not near genes chr2R 15704517 intergenic not near genes chr2R 15704728 intergenic not near genes chr2R_5_15700001 chr2R_15700001 RAL-367 484 chr2R 15733951 15733969 chr2R 15734107 15734125 4 156 1.5 0.5 1.0 2.0 174 chr2R 15733951 intron CG30089 + chr2R 15734038 intron CG30089 + chr2R 15734125 intron CG30089 + chr2R_4_15730001 chr2R_15730001 RAL-367 485 chr2R 15849408 15849442 chr2R 15849495 15849509 23 83 2.0 2.0 2.0 7.7 101 chr2R 15849408 5` UTR tun + chr2R 15849458 5` UTR tun + chr2R 15849509 5` UTR tun + chr2R_23_15845001 chr2R_15845001 RAL-367 486 chr2R 16093574 16093599 chr2R 16093661 16093661 4 77 0.5 0.0 0.2 3.3 87 chr2R 16093574 intron Dg - chr2R 16093618 intron Dg - chr2R 16093661 intron Dg - chr2R_4_16090001 chr2R_16090001 RAL-367 487 chr2R 16217779 16217798 chr2R 16217855 16217874 6 76 3.0 3.0 3.0 1.5 95 chr2R 16217779 intron mrj - chr2R 16217826 intron mrj - chr2R 16217874 intron mrj - chr2R_6_16215001 chr2R_16215001 RAL-367 488 chr2R 16227307 16227334 chr2R 16227390 16227417 7 83 3.5 3.5 3.5 1.6 110 chr2R 16227307 intron,intron CG15706 -,Tsf3 + chr2R 16227362 intron,intron CG15706 -,Tsf3 + chr2R 16227417 intron,intron CG15706 -,Tsf3 + chr2R_7_16225001 chr2R_16225001 RAL-367 489 chr2R 16489272 16489294 chr2R 16489355 16489378 5 84 1.5 0.0 0.8 2.8 106 chr2R 16489272 intergenic CG33459 + chr2R 16489325 intergenic CG33459 + chr2R 16489378 intergenic CG33459 + chr2R_5_16485001 chr2R_16485001 RAL-367 490 chr2R 16503873 16503899 chr2R 16503963 16503978 9 88 1.0 1.0 1.0 4.5 105 chr2R 16503873 intron Sema-2a + chr2R 16503926 intron Sema-2a + chr2R 16503978 intron Sema-2a + chr2R_9_16500001 chr2R_16500001 RAL-367 491 chr2R 16537914 16538091 chr2R 16537994 16538185 5 83 2.5 2.5 2.5 1.4 271 chr2R 16537914 intergenic not near genes chr2R 16538050 intergenic not near genes chr2R 16538185 intergenic not near genes chr2R_5_16535001 chr2R_16535001 RAL-367 492 chr2R 16539643 16539668 chr2R 16544852 16544877 copia 5 5209 2.0 0.5 1.2 2.3 5234 chr2R 16539643 intergenic not near genes chr2R 16542260 intergenic not near genes chr2R 16544877 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-367 493 chr2R 16552388 16552417 chr2R 16552466 16552495 5 78 3.5 1.5 2.5 1.4 107 chr2R 16552388 5` UTR Syn2 + chr2R 16552442 5` UTR Syn2 + chr2R 16552495 5` UTR Syn2 + chr2R_5_16550001 chr2R_16550001 RAL-367 494 chr2R 16601522 16601538 chr2R 16601633 16601640 5 109 5.5 4.0 4.8 0.9 118 chr2R 16601522 intron CG8303 - chr2R 16601581 intron CG8303 - chr2R 16601640 intron CG8303 - chr2R_5_16600001 chr2R_16600001 RAL-367 495 chr2R 16617062 16617072 chr2R 16617141 16617151 8 79 4.0 4.5 4.2 1.5 89 chr2R 16617062 intron CG5065 + chr2R 16617106 intron CG5065 + chr2R 16617151 intron CG5065 + chr2R_8_16615001 chr2R_16615001 RAL-367 496 chr2R 16618723 16618742 chr2R 16618799 16618818 4 76 0.0 3.0 1.5 1.6 95 chr2R 16618723 intron CG5065 + chr2R 16618770 intron CG5065 + chr2R 16618818 5` UTR CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-367 497 chr2R 16705228 16705258 chr2R 16705356 16705386 10 128 2.0 3.0 2.5 2.9 158 chr2R 16705228 intron CG30463 - chr2R 16705307 intron CG30463 - chr2R 16705386 intron CG30463 - chr2R_10_16705001 chr2R_16705001 RAL-367 498 chr2R 16893776 16893804 chr2R 16893859 16893887 7 82 1.5 1.5 1.5 2.8 111 chr2R 16893776 intron CG8910 - chr2R 16893832 intron CG8910 - chr2R 16893887 intron CG8910 - chr2R_7_16890001 chr2R_16890001 RAL-367 499 chr2R 17147243 17147273 chr2R 17152274 17152304 jockey 7 5031 4.5 3.0 3.8 1.5 5061 chr2R 17147243 intergenic not near genes chr2R 17149774 intergenic not near genes chr2R 17152304 intergenic not near genes chr2R_7_17145001 chr2R_17145001 RAL-367 500 chr2R 17161354 17161363 chr2R 17161561 17161570 6 207 3.0 0.0 1.5 2.4 216 chr2R 17161354 intergenic not near genes chr2R 17161462 intergenic not near genes chr2R 17161570 intergenic not near genes chr2R_6_17160001 chr2R_17160001 RAL-367 501 chr2R 17176365 17176381 chr2R 17182549 17182571 diver 5 6189 2.0 0.0 1.0 2.5 6206 chr2R 17176365 intergenic not near genes chr2R 17179468 intergenic not near genes chr2R 17182571 intergenic not near genes chr2R_5_17175001 chr2R_17175001 RAL-367 502 chr2R 17236506 17236536 chr2R 17241710 17241740 copia 9 5204 1.0 3.5 2.2 2.8 5234 chr2R 17236506 intron mbl + chr2R 17239123 intron mbl + chr2R 17241740 intron mbl + chr2R_9_17235001 chr2R_17235001 RAL-367 503 chr2R 17372275 17372309 chr2R 17372352 17372386 10 74 1.5 1.5 1.5 4.0 111 chr2R 17372275 intron mbl + chr2R 17372330 intron mbl + chr2R 17372386 intron mbl + chr2R_10_17370001 chr2R_17370001 RAL-367 504 chr2R 17655206 17655234 chr2R 17655283 17655311 6 77 3.5 2.0 2.8 1.6 105 chr2R 17655206 intron CCHa1-R - chr2R 17655258 intron CCHa1-R - chr2R 17655311 intron CCHa1-R - chr2R_6_17655001 chr2R_17655001 RAL-367 505 chr2R 17703634 17703660 chr2R 17703718 17703744 7 84 0.5 1.0 0.8 3.9 110 chr2R 17703634 3` UTR CG6424 - chr2R 17703689 3` UTR CG6424 - chr2R 17703744 3` UTR CG6424 - chr2R_7_17700001 chr2R_17700001 RAL-367 506 chr2R 17709983 17710104 chr2R 17710074 17710182 6 87 0.0 0.0 0.0 6.0 199 chr2R 17709983 intron CG6424 - chr2R 17710082 intron CG6424 - chr2R 17710182 intron CG6424 - chr2R_6_17710001 chr2R_17710001 RAL-367 507 chr2R 17937526 17937552 chr2R 17937606 17937631 9 78 4.5 3.0 3.8 1.9 105 chr2R 17937526 intergenic not near genes chr2R 17937578 intergenic not near genes chr2R 17937631 intergenic not near genes chr2R_9_17935001 chr2R_17935001 RAL-367 508 chr2R 18050085 18050105 chr2R 18053591 18053611 6 3506 8.5 13.0 10.8 0.5 3526 chr2R 18050085 3` UTR Muc55B - chr2R 18051848 exon Muc55B - chr2R 18053611 intron CG10911 - chr2R_6_18050001 chr2R_18050001 RAL-367 509 chr2R 18124340 18124365 chr2R 18124417 18124442 6 77 2.0 1.0 1.5 2.4 102 chr2R 18124340 intron stau - chr2R 18124391 intron stau - chr2R 18124442 intron stau - chr2R_6_18120001 chr2R_18120001 RAL-367 510 chr2R 18255694 18255721 chr2R 18255908 18255934 4 214 0.0 1.5 0.8 2.2 240 chr2R 18255694 intergenic not near genes chr2R 18255814 intergenic not near genes chr2R 18255934 intergenic not near genes chr2R_4_18255001 chr2R_18255001 RAL-367 511 chr2R 18289458 18289463 chr2R 18289530 18289565 5 96 1.5 1.0 1.2 2.3 107 chr2R 18289458 intron,intron sbb -,CG14502 + chr2R 18289512 intron,intron sbb -,CG14502 + chr2R 18289565 exon,intron sbb -,CG14502 + chr2R_5_18285001 chr2R_18285001 RAL-367 512 chr2R 18358402 18358422 chr2R 18372614 18372634 roo 6 14212 2.0 4.5 3.2 1.4 14232 chr2R 18358402 intergenic not near genes chr2R 18365518 intergenic not near genes chr2R 18372634 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-367 513 chr2R 18407230 18407258 chr2R 18407315 18407339 8 84 1.5 6.5 4.0 1.6 109 chr2R 18407230 exon GstE7 + chr2R 18407284 exon GstE7 + chr2R 18407339 exon GstE7 + chr2R_8_18405001 chr2R_18405001 RAL-367 514 chr2R 18502336 18502360 chr2R 18502713 18502734 4 377 3.5 2.5 3.0 1.0 398 chr2R 18502336 intergenic not near genes chr2R 18502535 intergenic not near genes chr2R 18502734 intergenic not near genes chr2R_4_18500001 chr2R_18500001 RAL-367 515 chr2R 18528198 18528222 chr2R 18528283 18528301 8 82 1.0 2.5 1.8 2.9 103 chr2R 18528198 intron CG10924 + chr2R 18528250 intron CG10924 + chr2R 18528301 intron CG10924 + chr2R_8_18525001 chr2R_18525001 RAL-367 516 chr2R 18541641 18541654 chr2R 18541823 18541835 8 181 4.5 4.5 4.5 1.5 194 chr2R 18541641 intron Rgk2 + chr2R 18541738 intron Rgk2 + chr2R 18541835 intron Rgk2 + chr2R_8_18540001 chr2R_18540001 RAL-367 517 chr2R 18570737 18570764 chr2R 18570871 18570898 8 133 4.0 2.0 3.0 2.0 161 chr2R 18570737 intron GEFmeso - chr2R 18570818 intron GEFmeso - chr2R 18570898 intron GEFmeso - chr2R_8_18570001 chr2R_18570001 RAL-367 518 chr2R 18575811 18575822 chr2R 18581989 18582010 3S18 5 6183 5.5 4.5 5.0 0.8 6199 chr2R 18575811 intron GEFmeso - chr2R 18578910 intron GEFmeso - chr2R 18582010 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-367 519 chr2R 18585804 18585817 chr2R 18585882 18585895 5 78 7.0 1.0 4.0 1.0 91 chr2R 18585804 intron GEFmeso - chr2R 18585850 intron GEFmeso - chr2R 18585895 intron GEFmeso - chr2R_5_18585001 chr2R_18585001 RAL-367 520 chr2R 18768934 18768958 chr2R 18769056 18769080 5 122 2.5 3.5 3.0 1.2 146 chr2R 18768934 intron Mctp + chr2R 18769007 intron Mctp + chr2R 18769080 intron Mctp + chr2R_5_18765001 chr2R_18765001 RAL-367 521 chr2R 18785918 18785943 chr2R 18785997 18786022 9 76 1.5 4.0 2.8 2.4 104 chr2R 18785918 intron CG15080 + chr2R 18785970 intron CG15080 + chr2R 18786022 intron CG15080 + chr2R_9_18785001 chr2R_18785001 RAL-367 522 chr2R 18855186 18855218 chr2R 18855266 18855298 9 75 3.0 2.5 2.8 2.4 112 chr2R 18855186 intergenic Jheh1 - chr2R 18855242 intergenic Jheh1 - chr2R 18855298 intergenic Jheh1 -,Jheh2 - chr2R_9_18855001 chr2R_18855001 RAL-367 523 chr2R 18964917 18964947 chr2R 18964993 18965023 6 76 4.5 1.5 3.0 1.5 106 chr2R 18964917 intergenic not near genes chr2R 18964970 intergenic not near genes chr2R 18965023 intergenic not near genes chr2R_6_18960001 chr2R_18960001 RAL-367 524 chr2R 19015438 19015462 chr2R 19015526 19015550 9 88 2.0 5.0 3.5 2.0 112 chr2R 19015438 intergenic not near genes chr2R 19015494 intergenic not near genes chr2R 19015550 intergenic not near genes chr2R_9_19015001 chr2R_19015001 RAL-367 525 chr2R 19485522 19485537 chr2R 19485617 19485632 5 94 1.5 2.0 1.8 1.8 110 chr2R 19485522 3` UTR,3` UTR par-1 +,TBCB - chr2R 19485577 3` UTR,3` UTR par-1 +,TBCB - chr2R 19485632 3` UTR,3` UTR par-1 +,TBCB - chr2R_5_19485001 chr2R_19485001 RAL-367 526 chr2R 19639587 19639599 chr2R 19639663 19639675 6 76 0.0 3.5 1.8 2.1 88 chr2R 19639587 intergenic not near genes chr2R 19639631 intergenic not near genes chr2R 19639675 intergenic not near genes chr2R_6_19635001 chr2R_19635001 RAL-367 527 chr2R 19776593 19776625 chr2R 19779916 19779948 jockey 7 3323 1.5 3.0 2.2 2.2 3355 chr2R 19776593 intergenic not near genes chr2R 19778270 intergenic not near genes chr2R 19779948 intergenic not near genes chr2R_7_19775001 chr2R_19775001 RAL-367 528 chr2R 19914848 19914858 chr2R 19922260 19922270 mdg1 5 7412 4.5 5.0 4.8 0.9 7422 chr2R 19914848 intergenic not near genes chr2R 19918559 intergenic not near genes chr2R 19922270 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-367 529 chr2R 19914859 19914877 chr2R 19922259 19922289 mdg1 5 7410 2.0 4.5 3.2 1.2 7430 chr2R 19914859 intergenic not near genes chr2R 19918574 intergenic not near genes chr2R 19922289 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-367 530 chr2R 19957440 19957464 chr2R 19962642 19962666 copia 11 5200 4.0 5.0 4.5 2.0 5226 chr2R 19957440 intergenic CG44623 + chr2R 19960053 intergenic not near genes chr2R 19962666 intergenic not near genes chr2R_11_19960001 chr2R_19960001 RAL-367 531 chr2R 20003310 20003338 chr2R 20003407 20003431 10 96 1.0 2.5 1.8 3.6 121 chr2R 20003310 intergenic CG16898 - chr2R 20003370 intergenic CG16898 - chr2R 20003431 intergenic CG16898 - chr2R_10_20000001 chr2R_20000001 RAL-367 532 chr2R 20004773 20004782 chr2R 20004855 20004864 6 82 2.5 4.5 3.5 1.3 91 chr2R 20004773 exon CG16898 - chr2R 20004818 exon CG16898 - chr2R 20004864 exon CG16898 - chr2R_6_20000001 chr2R_20000001 RAL-367 533 chr2R 20033157 20033186 chr2R 20033532 20033561 4 375 4.5 0.5 2.5 1.1 404 chr2R 20033157 intergenic not near genes chr2R 20033359 intergenic not near genes chr2R 20033561 intergenic not near genes chr2R_4_20030001 chr2R_20030001 RAL-367 534 chr2R 20080601 20080617 chr2R 20080678 20080694 6 77 0.0 3.0 1.5 2.4 93 chr2R 20080601 intergenic not near genes chr2R 20080648 intergenic not near genes chr2R 20080694 intergenic not near genes chr2R_6_20080001 chr2R_20080001 RAL-367 535 chr2R 20095399 20095411 chr2R 20095514 20095524 4 114 2.0 1.0 1.5 1.6 125 chr2R 20095399 intergenic not near genes chr2R 20095462 intergenic not near genes chr2R 20095524 intergenic not near genes chr2R_4_20095001 chr2R_20095001 RAL-367 536 chr2R 20142471 20142483 chr2R 20142547 20142559 4 76 0.0 1.0 0.5 2.7 88 chr2R 20142471 intergenic not near genes chr2R 20142515 intergenic not near genes chr2R 20142559 intergenic not near genes chr2R_4_20140001 chr2R_20140001 RAL-367 537 chr2R 20151971 20151993 chr2R 20152056 20152078 7 85 3.0 5.5 4.2 1.3 107 chr2R 20151971 intergenic not near genes chr2R 20152024 intergenic not near genes chr2R 20152078 intergenic not near genes chr2R_7_20150001 chr2R_20150001 RAL-367 538 chr2R 20196835 20196861 chr2R 20197076 20197099 9 240 1.5 2.0 1.8 3.2 264 chr2R 20196835 intergenic not near genes chr2R 20196967 intergenic not near genes chr2R 20197099 intergenic not near genes chr2R_9_20195001 chr2R_20195001 RAL-367 539 chr2R 20405354 20405387 chr2R 20405831 20405864 10 476 1.0 2.0 1.5 4.0 510 chr2R 20405354 intergenic not near genes chr2R 20405609 intergenic not near genes chr2R 20405864 intergenic not near genes chr2R_10_20405001 chr2R_20405001 RAL-367 540 chr2R 20523038 20523068 chr2R 20523149 20523179 5 111 1.0 3.5 2.2 1.6 141 chr2R 20523038 intergenic not near genes chr2R 20523108 intergenic not near genes chr2R 20523179 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-367 541 chr2R 20524314 20524335 chr2R 20524440 20524460 5 124 0.5 3.5 2.0 1.7 146 chr2R 20524314 intergenic not near genes chr2R 20524387 intergenic not near genes chr2R 20524460 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-367 542 chr2R 20739443 20739475 chr2R 20744211 20744243 F-element 9 4766 2.5 4.0 3.2 2.1 4800 chr2R 20739443 intron dpr + chr2R 20741843 intron dpr + chr2R 20744243 intron dpr + chr2R_9_20740001 chr2R_20740001 RAL-367 543 chr2R 20838058 20838084 chr2R 20838139 20838165 5 81 0.0 1.0 0.5 3.3 107 chr2R 20838058 intron CR44667 + chr2R 20838112 intron CR44667 + chr2R 20838165 intron CR44667 + chr2R_5_20835001 chr2R_20835001 RAL-367 544 chr2R 20869411 20869431 chr2R 20869499 20869512 6 87 4.5 1.0 2.8 1.6 101 chr2R 20869411 intergenic IM4 - chr2R 20869462 intergenic IM4 - chr2R 20869512 intergenic IM4 - chr2R_6_20865001 chr2R_20865001 RAL-367 545 chr2R 20962905 20962937 chr2R 20963003 20963035 7 98 3.0 2.0 2.5 2.0 130 chr2R 20962905 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963035 intergenic not near genes chr2R_7_20960001 chr2R_20960001 RAL-367 546 chr2R 21110795 21110822 chr2R 21110888 21110915 6 93 3.5 3.0 3.2 1.4 120 chr2R 21110795 intron ktub + chr2R 21110855 intron ktub + chr2R 21110915 intron ktub + chr2R_6_21110001 chr2R_21110001 RAL-367 547 chr2R 21241600 21241627 chr2R 21241688 21241715 5 88 0.0 0.0 0.0 5.0 115 chr2R 21241600 intron ASPP - chr2R 21241658 intron ASPP - chr2R 21241715 intron ASPP - chr2R_5_21240001 chr2R_21240001 RAL-367 548 chr2R 21326066 21326089 chr2R 21326155 21326178 9 89 1.5 3.0 2.2 2.8 112 chr2R 21326066 intron dom + chr2R 21326122 intron dom + chr2R 21326178 intron dom + chr2R_9_21325001 chr2R_21325001 RAL-367 549 chr2R 21417043 21417070 chr2R 21417122 21417124 12 77 5.0 8.5 6.8 1.5 81 chr2R 21417043 intron Sdc - chr2R 21417084 intron Sdc - chr2R 21417124 intron Sdc - chr2R_12_21415001 chr2R_21415001 RAL-367 550 chr2R 21505765 21505791 chr2R 21505846 21505872 7 81 2.5 1.5 2.0 2.3 107 chr2R 21505765 intron MESK2 + chr2R 21505818 intron MESK2 + chr2R 21505872 intron MESK2 + chr2R_7_21505001 chr2R_21505001 RAL-367 551 chr2R 21700160 21700183 chr2R 21700240 21700264 6 84 2.0 3.5 2.8 1.6 104 chr2R 21700160 intron HmgZ - chr2R 21700212 intron HmgZ - chr2R 21700264 intron HmgZ - chr2R_6_21700001 chr2R_21700001 RAL-367 552 chr2R 21738283 21738308 chr2R 21747443 21747446 roo 10 9156 1.0 1.0 1.0 5.0 9163 chr2R 21738283 intergenic not near genes chr2R 21742864 intergenic not near genes chr2R 21747446 intergenic not near genes chr2R_10_21740001 chr2R_21740001 RAL-367 553 chr2R 21753092 21753114 chr2R 21753577 21753599 roo 7 484 4.0 4.0 4.0 1.4 507 chr2R 21753092 intergenic not near genes chr2R 21753346 intergenic not near genes chr2R 21753599 intergenic not near genes chr2R_7_21750001 chr2R_21750001 RAL-367 554 chr2R 21809532 21809558 chr2R 21817772 21817798 roo 7 8240 1.5 4.5 3.0 1.8 8266 chr2R 21809532 intergenic not near genes chr2R 21813665 intergenic not near genes chr2R 21817798 intergenic not near genes chr2R_7_21810001 chr2R_21810001 RAL-367 555 chr2R 21878728 21878752 chr2R 21878806 21878830 8 78 1.0 2.0 1.5 3.2 102 chr2R 21878728 intron Fili + chr2R 21878779 intron Fili + chr2R 21878830 intron Fili + chr2R_8_21875001 chr2R_21875001 RAL-367 556 chr2R 21956301 21956329 chr2R 21956380 21956408 5 79 1.0 2.5 1.8 1.8 107 chr2R 21956301 intergenic not near genes chr2R 21956354 intergenic not near genes chr2R 21956408 intergenic not near genes chr2R_5_21955001 chr2R_21955001 RAL-367 557 chr2R 22003095 22003122 chr2R 22003176 22003184 6 79 1.5 0.5 1.0 3.0 89 chr2R 22003095 intron CG34370 - chr2R 22003140 intron CG34370 - chr2R 22003184 intron CG34370 - chr2R_6_22000001 chr2R_22000001 RAL-367 558 chr2R 22072684 22072713 chr2R 22072769 22072797 13 85 3.0 2.5 2.8 3.4 113 chr2R 22072684 intron CG11474 - chr2R 22072740 intron CG11474 - chr2R 22072797 exon CG11474 - chr2R_13_22070001 chr2R_22070001 RAL-367 559 chr2R 22185684 22185704 chr2R 22185772 22185803 4 96 2.5 0.0 1.2 1.8 119 chr2R 22185684 3` UTR MED16 + chr2R 22185744 3` UTR MED16 + chr2R 22185803 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-367 560 chr2R 22200777 22200808 chr2R 22200883 22200908 12 104 5.0 3.0 4.0 2.4 131 chr2R 22200777 intron Swim - chr2R 22200842 intron Swim - chr2R 22200908 intron Swim - chr2R_12_22200001 chr2R_22200001 RAL-367 561 chr2R 22280109 22280137 chr2R 22280195 22280223 6 86 2.0 2.5 2.2 1.9 114 chr2R 22280109 intron dve + chr2R 22280166 intron dve + chr2R 22280223 intron dve + chr2R_6_22280001 chr2R_22280001 RAL-367 562 chr2R 22290078 22290093 chr2R 22290162 22290177 5 84 0.5 1.0 0.8 2.8 99 chr2R 22290078 intergenic not near genes chr2R 22290128 intergenic not near genes chr2R 22290177 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-367 563 chr2R 22312779 22312797 chr2R 22312905 22312923 7 126 4.0 2.0 3.0 1.8 144 chr2R 22312779 intergenic CR44758 + chr2R 22312851 intergenic CR44758 + chr2R 22312923 5` UTR CR44758 + chr2R_7_22310001 chr2R_22310001 RAL-367 564 chr2R 22349692 22349721 chr2R 22351476 22351497 jockey 6 1782 5.5 3.5 4.5 1.1 1805 chr2R 22349692 intron Liprin-gamma - chr2R 22350594 intron Liprin-gamma - chr2R 22351497 intron Liprin-gamma - chr2R_6_22350001 chr2R_22350001 RAL-367 565 chr2R 22427039 22427061 chr2R 22427133 22427158 6 96 7.0 3.0 5.0 1.0 119 chr2R 22427039 intergenic CG10344 -,ppk12 + chr2R 22427098 intergenic CG10344 -,ppk12 + chr2R 22427158 intergenic CG10344 -,ppk12 + chr2R_6_22425001 chr2R_22425001 RAL-367 566 chr2R 22460380 22460406 chr2R 22460459 22460485 4 79 1.0 2.5 1.8 1.4 105 chr2R 22460380 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460485 intron CG10384 + chr2R_4_22460001 chr2R_22460001 RAL-367 567 chr2R 22465317 22465345 chr2R 22465516 22465544 BS 6 199 3.5 0.5 2.0 2.0 227 chr2R 22465317 intron CG10384 + chr2R 22465430 intron CG10384 + chr2R 22465544 intron CG10384 + chr2R_6_22465001 chr2R_22465001 RAL-367 568 chr2R 22499856 22499886 chr2R 22499932 22499962 9 76 1.0 6.5 3.8 1.9 106 chr2R 22499856 intron px - chr2R 22499909 intron px - chr2R 22499962 intron px - chr2R_9_22495001 chr2R_22495001 RAL-367 569 chr2R 22679749 22679766 chr2R 22679826 22679843 7 77 2.5 1.5 2.0 2.3 94 chr2R 22679749 intergenic not near genes chr2R 22679796 intergenic not near genes chr2R 22679843 intergenic not near genes chr2R_7_22675001 chr2R_22675001 RAL-367 570 chr2R 22723254 22723266 chr2R 22723330 22723342 5 76 0.5 2.5 1.5 2.0 88 chr2R 22723254 intron jbug - chr2R 22723298 intron jbug - chr2R 22723342 intron jbug - chr2R_5_22720001 chr2R_22720001 RAL-367 571 chr2R 22774968 22775002 chr2R 22775387 22775421 jockey 9 418 2.0 2.0 2.0 3.0 453 chr2R 22774968 intron CG42260 - chr2R 22775194 intron CG42260 - chr2R 22775421 intron CG42260 - chr2R_9_22775001 chr2R_22775001 RAL-367 572 chr2R 22785731 22785747 chr2R 22785809 22785825 4 78 1.5 0.0 0.8 2.2 94 chr2R 22785731 intron CG42260 - chr2R 22785778 intron CG42260 - chr2R 22785825 intron CG42260 - chr2R_4_22785001 chr2R_22785001 RAL-367 573 chr2R 22834330 22834345 chr2R 22836475 22836490 5 2145 16.0 6.0 11.0 0.4 2160 chr2R 22834330 exon CG30265 + chr2R 22835410 exon CG12490 + chr2R 22836490 exon CG12490 + chr2R_5_22835001 chr2R_22835001 RAL-367 574 chr2R 22945051 22945077 chr2R 22945165 22945191 17 114 2.5 2.5 2.5 4.9 140 chr2R 22945051 exon CG42694 + chr2R 22945121 3` UTR CG42694 + chr2R 22945191 intergenic CG42694 + chr2R_17_22945001 chr2R_22945001 RAL-367 575 chr2R 22948674 22948701 chr2R 22948775 22948803 9 99 2.5 2.5 2.5 2.6 129 chr2R 22948674 intergenic not near genes chr2R 22948738 intergenic not near genes chr2R 22948803 intergenic not near genes chr2R_9_22945001 chr2R_22945001 RAL-367 576 chr2R 22964521 22964550 chr2R 22964688 22964717 9 166 2.0 4.5 3.2 2.1 196 chr2R 22964521 intergenic not near genes chr2R 22964619 intergenic not near genes chr2R 22964717 intergenic not near genes chr2R_9_22960001 chr2R_22960001 RAL-367 577 chr2R 23061752 23061786 chr2R 23061828 23061862 8 76 1.5 3.0 2.2 2.5 110 chr2R 23061752 3` UTR l(2)06496 - chr2R 23061807 3` UTR l(2)06496 - chr2R 23061862 3` UTR l(2)06496 - chr2R_8_23060001 chr2R_23060001 RAL-367 578 chr2R 23115506 23115535 chr2R 23116020 23116049 4 514 2.0 1.0 1.5 1.6 543 chr2R 23115506 intergenic not near genes chr2R 23115778 intergenic not near genes chr2R 23116049 intergenic not near genes chr2R_4_23115001 chr2R_23115001 RAL-367 579 chr2R 23175039 23175068 chr2R 23175115 23175145 9 76 2.0 1.0 1.5 3.6 106 chr2R 23175039 intron CG34371 - chr2R 23175092 intron CG34371 - chr2R 23175145 intron CG34371 - chr2R_9_23175001 chr2R_23175001 RAL-367 580 chr2R 23219011 23219025 chr2R 23219249 23219264 6 236 3.5 0.0 1.8 2.1 253 chr2R 23219011 intergenic not near genes chr2R 23219138 intergenic not near genes chr2R 23219264 intergenic not near genes chr2R_6_23215001 chr2R_23215001 RAL-367 581 chr2R 23369372 23369405 chr2R 23369449 23369482 14 76 1.5 4.5 3.0 3.5 110 chr2R 23369372 exon Ice1 + chr2R 23369427 exon Ice1 + chr2R 23369482 exon Ice1 + chr2R_14_23365001 chr2R_23365001 RAL-367 582 chr2R 23411687 23411721 chr2R 23411772 23411805 8 79 2.0 1.0 1.5 3.2 118 chr2R 23411687 intergenic not near genes chr2R 23411746 intergenic not near genes chr2R 23411805 intergenic not near genes chr2R_8_23410001 chr2R_23410001 RAL-367 583 chr2R 23508925 23508941 chr2R 23509042 23509058 7 117 0.0 1.5 0.8 3.9 133 chr2R 23508925 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509058 intergenic not near genes chr2R_7_23505001 chr2R_23505001 RAL-367 584 chr2R 23529573 23529589 chr2R 23537149 23537154 412 4 7573 3.5 2.5 3.0 1.0 7581 chr2R 23529573 intron bw - chr2R 23533364 intron bw - chr2R 23537154 exon bw - chr2R_4_23530001 chr2R_23530001 RAL-367 585 chr2R 23758325 23758353 chr2R 23758401 23758429 6 76 4.0 1.5 2.8 1.6 104 chr2R 23758325 intron CG9850 - chr2R 23758377 intron CG9850 - chr2R 23758429 intron CG9850 - chr2R_6_23755001 chr2R_23755001 RAL-367 586 chr2R 23832879 23832909 chr2R 23832976 23833008 11 98 2.0 4.5 3.2 2.6 129 chr2R 23832879 intron CG5549 + chr2R 23832944 intron CG5549 + chr2R 23833008 intron CG5549 + chr2R_11_23830001 chr2R_23830001 RAL-367 587 chr2R 23914299 23914324 chr2R 23921923 23921948 412 8 7623 2.0 5.0 3.5 1.8 7649 chr2R 23914299 exon kcc + chr2R 23918124 intron kcc + chr2R 23921948 intron kcc + chr2R_8_23915001 chr2R_23915001 RAL-367 588 chr2R 23926832 23926865 chr2R 23926914 23926947 9 79 0.0 2.0 1.0 4.5 115 chr2R 23926832 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926890 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926947 3` UTR Ca-P60A - chr2R_9_23925001 chr2R_23925001 RAL-367 589 chr2R 23986512 23986540 chr2R 23986592 23986620 4 80 0.5 1.5 1.0 2.0 108 chr2R 23986512 intron Phm - chr2R 23986566 intron Phm - chr2R 23986620 intron,5` UTR Phm -,CG30178 + chr2R_4_23985001 chr2R_23985001 RAL-367 590 chr2R 24025710 24025741 chr2R 24025812 24025843 11 101 3.5 0.5 2.0 3.7 133 chr2R 24025710 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025776 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025843 3` UTR Adk2 + chr2R_11_24025001 chr2R_24025001 RAL-367 591 chr2R 24031380 24031412 chr2R 24031464 24031496 5 84 5.0 2.0 3.5 1.1 116 chr2R 24031380 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031496 intergenic Chi -,CG30172 - chr2R_5_24030001 chr2R_24030001 RAL-367 592 chr2R 24166663 24166687 chr2R 24166745 24166769 5 82 4.5 1.0 2.8 1.3 106 chr2R 24166663 intron CG3328 + chr2R 24166716 intron CG3328 + chr2R 24166769 intron CG3328 + chr2R_5_24165001 chr2R_24165001 RAL-367 593 chr2R 24228399 24228428 chr2R 24228476 24228494 9 68 3.0 1.5 2.2 2.8 95 chr2R 24228399 intron CG30419 - chr2R 24228446 intron CG30419 - chr2R 24228494 intron CG30419 - chr2R_9_24225001 chr2R_24225001 RAL-367 594 chr2R 24278346 24278359 chr2R 24278424 24278437 7 78 1.0 7.5 4.2 1.3 91 chr2R 24278346 intron nvy + chr2R 24278392 intron nvy + chr2R 24278437 intron nvy + chr2R_7_24275001 chr2R_24275001 RAL-367 595 chr2R 24395371 24395374 chr2R 24395446 24395450 5 76 4.0 8.5 6.2 0.7 79 chr2R 24395371 intron slik - chr2R 24395410 intron slik - chr2R 24395450 intron slik - chr2R_5_24395001 chr2R_24395001 RAL-367 596 chr2R 24590094 24590143 chr2R 24590202 24590235 5 105 0.0 0.5 0.2 4.2 141 chr2R 24590094 intron pio + chr2R 24590164 intron pio + chr2R 24590235 intron pio + chr2R_5_24590001 chr2R_24590001 RAL-367 597 chr2R 24647587 24647613 chr2R 24655144 24655170 412 10 7556 3.5 3.0 3.2 2.4 7583 chr2R 24647587 intergenic not near genes chr2R 24651378 intergenic not near genes chr2R 24655170 intergenic not near genes chr2R_10_24650001 chr2R_24650001 RAL-367 598 chr2R 24727890 24727904 chr2R 24735396 24735412 mdg1 5 7508 2.5 2.5 2.5 1.4 7522 chr2R 24727890 intron Mid1 - chr2R 24731651 intron Mid1 - chr2R 24735412 intron Mid1 - chr2R_5_24730001 chr2R_24730001 RAL-367 599 chr2R 24763610 24763644 chr2R 24765586 24765620 G2 10 1971 2.0 0.5 1.2 4.5 2010 chr2R 24763610 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765620 exon CG3894 + chr2R_10_24760001 chr2R_24760001 RAL-367 600 chr2R 24798400 24798432 chr2R 24798733 24798765 15 333 2.0 2.5 2.2 4.7 365 chr2R 24798400 exon CG12849 + chr2R 24798582 exon CG12849 + chr2R 24798765 intergenic CG3611 +,CG12849 + chr2R_15_24795001 chr2R_24795001 RAL-367 601 chr2R 24859846 24859869 chr2R 24859932 24859954 7 85 1.5 2.5 2.0 2.3 108 chr2R 24859846 5` UTR CR44829 + chr2R 24859900 5` UTR CR44829 + chr2R 24859954 5` UTR CR44829 + chr2R_7_24855001 chr2R_24855001 RAL-367 602 chr2R 24884058 24884076 chr2R 24884140 24884158 5 82 0.5 1.5 1.0 2.5 100 chr2R 24884058 intron NKAIN + chr2R 24884108 intron NKAIN + chr2R 24884158 intron NKAIN + chr2R_5_24880001 chr2R_24880001 RAL-367 603 chr2R 25004895 25004924 chr2R 25004973 25005002 10 74 0.0 3.0 1.5 4.0 107 chr2R 25004895 intron zip - chr2R 25004948 intron zip - chr2R 25005002 intron zip - chr2R_10_25000001 chr2R_25000001 RAL-367 604 chr2R 25014544 25014570 chr2R 25014620 25014646 15 76 3.0 3.5 3.2 3.6 102 chr2R 25014544 intron uzip + chr2R 25014595 intron uzip + chr2R 25014646 intron uzip + chr2R_15_25010001 chr2R_25010001 RAL-367 605 chr2R 25104809 25104829 chr2R 25104904 25104921 6 94 1.5 1.5 1.5 2.4 112 chr2R 25104809 intron lov - chr2R 25104865 intron lov - chr2R 25104921 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-367 606 chr2R 25124457 25124485 chr2R 25124548 25124561 9 88 0.0 2.0 1.0 4.5 104 chr2R 25124457 intron lov - chr2R 25124509 intron lov - chr2R 25124561 intron lov - chr2R_9_25120001 chr2R_25120001 RAL-367 607 chr2R 25253445 25253467 chr2R 25253521 25253542 4 74 1.5 3.0 2.2 1.2 97 chr2R 25253445 intron,intron CG9380 -,CG30428 + chr2R 25253494 intron,intron CG9380 -,CG30428 + chr2R 25253542 intron,intron CG9380 -,CG30428 + chr2R_4_25250001 chr2R_25250001 RAL-367 608 chr3L 68980 69002 chr3L 69067 69084 6 86 3.5 5.0 4.2 1.2 104 chr3L 68980 3` UTR Lsp1gamma + chr3L 69032 intergenic Lsp1gamma +,CR44510 + chr3L 69084 intergenic CR44510 +,Lsp1gamma + chr3L_6_65001 chr3L_65001 RAL-367 609 chr3L 93788 93822 chr3L 93869 93903 7 79 3.0 2.5 2.8 1.8 115 chr3L 93788 intergenic not near genes chr3L 93846 intergenic not near genes chr3L 93903 intergenic not near genes chr3L_7_90001 chr3L_90001 RAL-367 610 chr3L 94576 94599 chr3L 94691 94714 8 114 2.5 1.0 1.8 2.9 138 chr3L 94576 intergenic not near genes chr3L 94645 intergenic not near genes chr3L 94714 intergenic not near genes chr3L_8_90001 chr3L_90001 RAL-367 611 chr3L 106012 106025 chr3L 106130 106154 4 126 3.5 0.5 2.0 1.3 142 chr3L 106012 intergenic not near genes chr3L 106083 intergenic not near genes chr3L 106154 intergenic not near genes chr3L_4_105001 chr3L_105001 RAL-367 612 chr3L 375269 375280 chr3L 375353 375364 4 82 0.0 3.0 1.5 1.6 95 chr3L 375269 intron trh - chr3L 375316 intron trh - chr3L 375364 intron trh - chr3L_4_375001 chr3L_375001 RAL-367 613 chr3L 402689 402714 chr3L 409742 409767 297 7 7050 3.0 2.0 2.5 2.0 7078 chr3L 402689 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409767 intergenic not near genes chr3L_7_405001 chr3L_405001 RAL-367 614 chr3L 416133 416161 chr3L 416221 416249 5 88 3.0 2.5 2.8 1.3 116 chr3L 416133 intergenic not near genes chr3L 416191 intergenic not near genes chr3L 416249 intergenic not near genes chr3L_5_415001 chr3L_415001 RAL-367 615 chr3L 514281 514292 chr3L 514358 514369 5 77 2.5 5.0 3.8 1.0 88 chr3L 514281 intron klar - chr3L 514325 intron klar - chr3L 514369 intron klar - chr3L_5_510001 chr3L_510001 RAL-367 616 chr3L 559528 559545 chr3L 559916 559934 8 388 4.0 1.5 2.8 2.1 406 chr3L 559528 intron hipk + chr3L 559731 intron hipk + chr3L 559934 intron hipk + chr3L_8_555001 chr3L_555001 RAL-367 617 chr3L 642469 642498 chr3L 642560 642582 8 88 2.5 1.5 2.0 2.7 113 chr3L 642469 5` UTR CR43334 + chr3L 642526 5` UTR CR43334 + chr3L 642582 5` UTR CR43334 + chr3L_8_640001 chr3L_640001 RAL-367 618 chr3L 651391 651422 chr3L 651479 651510 8 88 3.5 4.0 3.8 1.7 119 chr3L 651391 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651510 intergenic CG3402 -,Gale + chr3L_8_650001 chr3L_650001 RAL-367 619 chr3L 858001 858020 chr3L 866479 866501 Tirant 4 8480 4.5 2.0 3.2 1.0 8500 chr3L 858001 intergenic not near genes chr3L 862251 intergenic not near genes chr3L 866501 5` UTR CG12502 + chr3L_4_860001 chr3L_860001 RAL-367 620 chr3L 866876 866895 chr3L 867093 867112 9 216 3.5 1.0 2.2 2.8 236 chr3L 866876 intron CG12502 + chr3L 866994 intron CG12502 + chr3L 867112 intron CG12502 + chr3L_9_865001 chr3L_865001 RAL-367 621 chr3L 925181 925205 chr3L 932607 932630 mdg1 7 7426 5.0 2.0 3.5 1.6 7449 chr3L 925181 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932630 intron Glut1 + chr3L_7_925001 chr3L_925001 RAL-367 622 chr3L 933912 933918 chr3L 934015 934021 4 103 5.0 0.5 2.8 1.1 109 chr3L 933912 intron Glut1 + chr3L 933966 intron Glut1 + chr3L 934021 intron Glut1 + chr3L_4_930001 chr3L_930001 RAL-367 623 chr3L 939776 939800 chr3L 940897 940921 jockey 6 1121 3.0 3.0 3.0 1.5 1145 chr3L 939776 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940921 intron Glut1 + chr3L_6_940001 chr3L_940001 RAL-367 624 chr3L 1021373 1021405 chr3L 1021453 1021484 10 80 4.5 3.0 3.8 2.1 111 chr3L 1021373 intron trio - chr3L 1021428 intron trio - chr3L 1021484 intron trio - chr3L_10_1020001 chr3L_1020001 RAL-367 625 chr3L 1047351 1047385 chr3L 1055163 1055180 412 7 7801 4.0 3.0 3.5 1.6 7829 chr3L 1047351 intron bab1 - chr3L 1051266 intron bab1 - chr3L 1055180 intron bab1 - chr3L_7_1050001 chr3L_1050001 RAL-367 626 chr3L 1109634 1109666 chr3L 1109722 1109754 12 88 2.0 2.5 2.2 3.8 120 chr3L 1109634 intergenic not near genes chr3L 1109694 intergenic not near genes chr3L 1109754 intergenic not near genes chr3L_12_1105001 chr3L_1105001 RAL-367 627 chr3L 1116681 1116708 chr3L 1116765 1116792 7 84 0.0 1.0 0.5 4.7 111 chr3L 1116681 intergenic not near genes chr3L 1116736 intergenic not near genes chr3L 1116792 intergenic not near genes chr3L_7_1115001 chr3L_1115001 RAL-367 628 chr3L 1145244 1145257 chr3L 1145323 1145336 5 79 3.0 0.0 1.5 2.0 92 chr3L 1145244 intron bab2 - chr3L 1145290 intron bab2 - chr3L 1145336 intron bab2 - chr3L_5_1145001 chr3L_1145001 RAL-367 629 chr3L 1154139 1154162 chr3L 1163282 1163312 roo 6 9147 2.5 2.5 2.5 1.7 9173 chr3L 1154139 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163312 intron bab2 - chr3L_6_1155001 chr3L_1155001 RAL-367 630 chr3L 1175729 1175755 chr3L 1175861 1175887 12 132 2.0 2.0 2.0 4.0 158 chr3L 1175729 intron bab2 - chr3L 1175808 intron bab2 - chr3L 1175887 intron bab2 - chr3L_12_1175001 chr3L_1175001 RAL-367 631 chr3L 1219594 1219625 chr3L 1227327 1227358 412 7 7730 2.5 2.0 2.2 2.2 7764 chr3L 1219594 intron mwh + chr3L 1223476 intron mwh + chr3L 1227358 intron mwh + chr3L_7_1220001 chr3L_1220001 RAL-367 632 chr3L 1310981 1311014 chr3L 1315846 1315874 8 4861 13.0 17.5 15.2 0.5 4893 chr3L 1310981 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315874 exon CG9153 + chr3L_8_1310001 chr3L_1310001 RAL-367 633 chr3L 1347161 1347188 chr3L 1347245 1347272 13 84 1.0 0.0 0.5 8.7 111 chr3L 1347161 intron Ptp61F - chr3L 1347216 intron Ptp61F - chr3L 1347272 intron Ptp61F - chr3L_13_1345001 chr3L_1345001 RAL-367 634 chr3L 1358246 1358276 chr3L 1358883 1358889 7 631 2.5 0.5 1.5 2.8 643 chr3L 1358246 intron Ptp61F - chr3L 1358568 intron Ptp61F - chr3L 1358889 intron Ptp61F - chr3L_7_1355001 chr3L_1355001 RAL-367 635 chr3L 1359308 1359328 chr3L 1359388 1359408 9 78 2.5 4.0 3.2 2.1 100 chr3L 1359308 intron Ptp61F - chr3L 1359358 intron Ptp61F - chr3L 1359408 intron Ptp61F - chr3L_9_1355001 chr3L_1355001 RAL-367 636 chr3L 1396744 1396752 chr3L 1396828 1396836 6 83 4.5 5.5 5.0 1.0 92 chr3L 1396744 intron Ptp61F - chr3L 1396790 intron Ptp61F - chr3L 1396836 intron Ptp61F - chr3L_6_1395001 chr3L_1395001 RAL-367 637 chr3L 1415784 1415807 chr3L 1415866 1415889 5 79 1.0 3.0 2.0 1.7 105 chr3L 1415784 intron Ptp61F - chr3L 1415836 intron Ptp61F - chr3L 1415889 intron Ptp61F - chr3L_5_1415001 chr3L_1415001 RAL-367 638 chr3L 1505996 1506031 chr3L 1513593 1513598 17.6 8 7592 3.5 1.5 2.5 2.3 7602 chr3L 1505996 intron,intron Psa +,cue - chr3L 1509797 intron,intron Psa +,cue - chr3L 1513598 intron,intron Psa +,cue - chr3L_8_1505001 chr3L_1505001 RAL-367 639 chr3L 1571484 1571490 chr3L 1571569 1571575 4 85 1.0 2.5 1.8 1.4 91 chr3L 1571484 intron CG12004 + chr3L 1571530 intron CG12004 + chr3L 1571575 intron CG12004 + chr3L_4_1570001 chr3L_1570001 RAL-367 640 chr3L 1581162 1581183 chr3L 1581496 1581502 9 332 0.0 2.0 1.0 4.5 340 chr3L 1581162 intron CG13917 + chr3L 1581332 intron CG13917 + chr3L 1581502 intron CG13917 + chr3L_9_1580001 chr3L_1580001 RAL-367 641 chr3L 1688246 1688270 chr3L 1688375 1688399 8 129 0.5 1.5 1.0 4.0 153 chr3L 1688246 intron CG7991 + chr3L 1688322 intron CG7991 + chr3L 1688399 intron CG7991 + chr3L_8_1685001 chr3L_1685001 RAL-367 642 chr3L 2035272 2035284 chr3L 2035348 2035360 4 76 1.0 0.0 0.5 2.7 88 chr3L 2035272 intergenic not near genes chr3L 2035316 intergenic not near genes chr3L 2035360 intergenic not near genes chr3L_4_2035001 chr3L_2035001 RAL-367 643 chr3L 2053192 2053210 chr3L 2053272 2053290 4 80 1.5 2.5 2.0 1.3 98 chr3L 2053192 exon sls - chr3L 2053241 exon sls - chr3L 2053290 exon sls - chr3L_4_2050001 chr3L_2050001 RAL-367 644 chr3L 2139208 2139222 chr3L 2139289 2139303 4 81 1.5 3.5 2.5 1.1 95 chr3L 2139208 intron zormin - chr3L 2139256 intron zormin - chr3L 2139303 intron zormin - chr3L_4_2135001 chr3L_2135001 RAL-367 645 chr3L 2277977 2278006 chr3L 2278173 2278202 8 196 2.5 3.0 2.8 2.1 225 chr3L 2277977 3` UTR yellow-g2 + chr3L 2278090 intergenic yellow-g2 + chr3L 2278202 intergenic yellow-g2 + chr3L_8_2275001 chr3L_2275001 RAL-367 646 chr3L 2308008 2308034 chr3L 2308109 2308140 9 105 3.0 3.5 3.2 2.1 132 chr3L 2308008 intergenic not near genes chr3L 2308074 intergenic not near genes chr3L 2308140 intergenic not near genes chr3L_9_2305001 chr3L_2305001 RAL-367 647 chr3L 2380343 2380374 chr3L 2380420 2380451 13 77 3.5 3.5 3.5 2.9 108 chr3L 2380343 intergenic not near genes chr3L 2380397 intergenic not near genes chr3L 2380451 intergenic not near genes chr3L_13_2380001 chr3L_2380001 RAL-367 648 chr3L 2447503 2447525 chr3L 2456659 2456662 roo 7 9153 8.0 2.5 5.2 1.1 9159 chr3L 2447503 intron CG45186 + chr3L 2452082 intron CG45186 + chr3L 2456662 intron CG45186 + chr3L_7_2450001 chr3L_2450001 RAL-367 649 chr3L 2518251 2518261 chr3L 2518331 2518341 4 80 6.0 2.0 4.0 0.8 90 chr3L 2518251 intron,intron Spn -,CR45170 + chr3L 2518296 intron,intron Spn -,CR45170 + chr3L 2518341 intron,5` UTR Spn -,CR45170 + chr3L_4_2515001 chr3L_2515001 RAL-367 650 chr3L 2533649 2533675 chr3L 2533731 2533757 7 78 4.5 1.5 3.0 1.8 108 chr3L 2533649 intron Spn - chr3L 2533703 intron Spn - chr3L 2533757 intron Spn - chr3L_7_2530001 chr3L_2530001 RAL-367 651 chr3L 2623395 2623407 chr3L 2623474 2623485 5 84 6.5 4.5 5.5 0.8 90 chr3L 2623395 intron Pxn - chr3L 2623440 intron Pxn - chr3L 2623485 intron Pxn - chr3L_5_2620001 chr3L_2620001 RAL-367 652 chr3L 2695167 2695187 chr3L 2695883 2695903 5 716 2.0 3.0 2.5 1.4 736 chr3L 2695167 intron Fife - chr3L 2695535 intron Fife - chr3L 2695903 intron Fife - chr3L_5_2695001 chr3L_2695001 RAL-367 653 chr3L 2697998 2698009 chr3L 2698389 2698400 4 391 1.5 2.5 2.0 1.3 402 chr3L 2697998 intron Fife - chr3L 2698199 intron Fife - chr3L 2698400 intron Fife - chr3L_4_2695001 chr3L_2695001 RAL-367 654 chr3L 2795724 2795732 chr3L 2795847 2795855 4 123 5.5 1.5 3.5 0.9 131 chr3L 2795724 intron CG43444 - chr3L 2795790 intron CG43444 - chr3L 2795855 intron CG43444 - chr3L_4_2795001 chr3L_2795001 RAL-367 655 chr3L 2862805 2862822 chr3L 2862887 2862904 6 82 2.0 4.5 3.2 1.4 99 chr3L 2862805 intron CG43444 - chr3L 2862854 intron CG43444 - chr3L 2862904 intron CG43444 - chr3L_6_2860001 chr3L_2860001 RAL-367 656 chr3L 2882116 2882137 chr3L 2882192 2882213 5 76 3.0 3.0 3.0 1.2 97 chr3L 2882116 intergenic not near genes chr3L 2882164 intergenic not near genes chr3L 2882213 intergenic not near genes chr3L_5_2880001 chr3L_2880001 RAL-367 657 chr3L 2927843 2927852 chr3L 2936120 2936129 Tirant 4 8277 4.0 2.0 3.0 1.0 8286 chr3L 2927843 intron Shab + chr3L 2931986 intron Shab + chr3L 2936129 intron Shab + chr3L_4_2930001 chr3L_2930001 RAL-367 658 chr3L 2927853 2927867 chr3L 2936114 2936144 Tirant 5 8274 3.0 1.5 2.2 1.6 8291 chr3L 2927853 intron Shab + chr3L 2931998 intron Shab + chr3L 2936144 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-367 659 chr3L 3061283 3061309 chr3L 3069866 3069892 Tirant 7 8581 2.5 0.5 1.5 2.8 8609 chr3L 3061283 intron CG32486 - chr3L 3065588 intron CG32486 - chr3L 3069892 intron CG32486 - chr3L_7_3065001 chr3L_3065001 RAL-367 660 chr3L 3259617 3259817 chr3L 3259712 3259917 4 94 0.0 1.5 0.8 2.2 300 chr3L 3259617 intron ckd + chr3L 3259767 intron ckd + chr3L 3259917 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-367 661 chr3L 3281459 3281471 chr3L 3281937 3281967 Doc 4 490 4.0 6.5 5.2 0.6 508 chr3L 3281459 intron CG12017 + chr3L 3281713 intron CG12017 + chr3L 3281967 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-367 662 chr3L 3307418 3307441 chr3L 3307498 3307521 5 80 2.0 1.5 1.8 1.8 103 chr3L 3307418 intron ZnT63C + chr3L 3307470 intron ZnT63C + chr3L 3307521 intron ZnT63C + chr3L_5_3305001 chr3L_3305001 RAL-367 663 chr3L 3314138 3314170 chr3L 3314272 3314304 11 134 5.0 7.0 6.0 1.6 166 chr3L 3314138 intergenic ZnT63C +,Drsl2 + chr3L 3314221 intergenic Drsl2 +,ZnT63C + chr3L 3314304 intergenic Drsl2 +,ZnT63C + chr3L_11_3310001 chr3L_3310001 RAL-367 664 chr3L 3312265 3312303 chr3L 3315546 3315584 10 3282 15.0 15.0 15.0 0.6 3319 chr3L 3312265 exon ZnT63C + chr3L 3313924 3` UTR ZnT63C + chr3L 3315584 intergenic Drsl4 +,Drsl3 + chr3L_10_3310001 chr3L_3310001 RAL-367 665 chr3L 3475080 3475110 chr3L 3475524 3475554 jockey 6 444 0.5 3.0 1.8 2.1 474 chr3L 3475080 intron CG42324 + chr3L 3475317 intron CG42324 + chr3L 3475554 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-367 666 chr3L 3483544 3483563 chr3L 3483751 3483770 7 207 3.5 1.5 2.5 2.0 226 chr3L 3483544 intron CG42324 + chr3L 3483657 intron CG42324 + chr3L 3483770 intron CG42324 + chr3L_7_3480001 chr3L_3480001 RAL-367 667 chr3L 3494754 3494781 chr3L 3494831 3494859 6 78 2.5 4.0 3.2 1.4 105 chr3L 3494754 intron CG42324 + chr3L 3494806 intron CG42324 + chr3L 3494859 intron CG42324 + chr3L_6_3490001 chr3L_3490001 RAL-367 668 chr3L 3539960 3539987 chr3L 3540049 3540076 4 86 0.5 0.0 0.2 3.3 116 chr3L 3539960 intron Eip63E + chr3L 3540018 intron Eip63E + chr3L 3540076 intron Eip63E + chr3L_4_3540001 chr3L_3540001 RAL-367 669 chr3L 3601296 3601332 chr3L 3606607 3606643 copia 9 5308 3.5 3.0 3.2 2.1 5347 chr3L 3601296 intron Eip63E + chr3L 3603970 intron Eip63E + chr3L 3606643 intron Eip63E + chr3L_9_3600001 chr3L_3600001 RAL-367 670 chr3L 3643294 3643311 chr3L 3643382 3643398 8 87 1.5 2.5 2.0 2.7 104 chr3L 3643294 intron dar1 + chr3L 3643346 intron dar1 + chr3L 3643398 intron dar1 + chr3L_8_3640001 chr3L_3640001 RAL-367 671 chr3L 3768011 3768042 chr3L 3768100 3768131 11 88 1.0 3.0 2.0 3.7 120 chr3L 3768011 intron CG32264 - chr3L 3768071 intron CG32264 - chr3L 3768131 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-367 672 chr3L 3791268 3791300 chr3L 3791352 3791376 6 83 0.0 2.5 1.2 2.7 108 chr3L 3791268 intron,exon CG32264 -,CG32266 + chr3L 3791322 intron,3` UTR CG32264 -,CG32266 + chr3L 3791376 intron,3` UTR CG32264 -,CG32266 + chr3L_6_3790001 chr3L_3790001 RAL-367 673 chr3L 3833741 3833769 chr3L 3833982 3834010 pogo 4 241 0.0 1.0 0.5 2.7 269 chr3L 3833741 intron enc + chr3L 3833876 intron enc + chr3L 3834010 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-367 674 chr3L 3845570 3845580 chr3L 3845664 3845674 4 94 2.5 0.5 1.5 1.6 104 chr3L 3845570 intergenic not near genes chr3L 3845622 intergenic not near genes chr3L 3845674 intergenic not near genes chr3L_4_3845001 chr3L_3845001 RAL-367 675 chr3L 3864844 3864850 chr3L 3864927 3864933 4 83 2.0 3.0 2.5 1.1 89 chr3L 3864844 intergenic CR45379 - chr3L 3864888 intergenic CR45379 - chr3L 3864933 intergenic not near genes chr3L_4_3860001 chr3L_3860001 RAL-367 676 chr3L 3889132 3889146 chr3L 3889215 3889229 4 83 0.0 1.5 0.8 2.2 97 chr3L 3889132 intergenic not near genes chr3L 3889180 intergenic not near genes chr3L 3889229 intergenic not near genes chr3L_4_3885001 chr3L_3885001 RAL-367 677 chr3L 4015735 4015767 chr3L 4015818 4015850 9 83 2.0 2.5 2.2 2.8 115 chr3L 4015735 intergenic not near genes chr3L 4015792 intergenic not near genes chr3L 4015850 intergenic not near genes chr3L_9_4015001 chr3L_4015001 RAL-367 678 chr3L 4208744 4208755 chr3L 4208822 4208833 4 78 1.5 3.0 2.2 1.2 89 chr3L 4208744 intron,intron CG43367 +,Cpr64Aa - chr3L 4208788 intron,intron CG43367 +,Cpr64Aa - chr3L 4208833 intron,intron CG43367 +,Cpr64Aa - chr3L_4_4205001 chr3L_4205001 RAL-367 679 chr3L 4347835 4347857 chr3L 4347921 4347943 9 86 2.0 2.5 2.2 2.8 108 chr3L 4347835 intron Cip4 - chr3L 4347889 intron Cip4 - chr3L 4347943 intron Cip4 - chr3L_9_4345001 chr3L_4345001 RAL-367 680 chr3L 4519422 4519444 chr3L 4519499 4519521 7 77 3.5 5.0 4.2 1.3 99 chr3L 4519422 intron Tie - chr3L 4519472 intron Tie - chr3L 4519521 intron Tie - chr3L_7_4515001 chr3L_4515001 RAL-367 681 chr3L 4597215 4597239 chr3L 4597297 4597321 5 80 2.0 2.5 2.2 1.6 106 chr3L 4597215 intron Src64B - chr3L 4597268 intron Src64B - chr3L 4597321 intron Src64B - chr3L_5_4595001 chr3L_4595001 RAL-367 682 chr3L 4607267 4607283 chr3L 4607358 4607374 5 91 1.5 1.5 1.5 2.0 107 chr3L 4607267 intron Src64B - chr3L 4607320 intron Src64B - chr3L 4607374 intron Src64B - chr3L_5_4605001 chr3L_4605001 RAL-367 683 chr3L 4624762 4624794 chr3L 4624847 4624882 4 79 0.5 0.0 0.2 3.3 120 chr3L 4624762 intron Src64B - chr3L 4624822 intron Src64B - chr3L 4624882 intron Src64B - chr3L_4_4620001 chr3L_4620001 RAL-367 684 chr3L 4676730 4676757 chr3L 4677422 4677449 9 691 1.0 3.5 2.2 2.8 719 chr3L 4676730 intron axo - chr3L 4677090 intron axo - chr3L 4677449 intron axo - chr3L_9_4675001 chr3L_4675001 RAL-367 685 chr3L 4754759 4754766 chr3L 4754835 4754842 5 76 2.0 3.5 2.8 1.3 83 chr3L 4754759 intron RhoGEF64C + chr3L 4754800 intron RhoGEF64C + chr3L 4754842 intron RhoGEF64C + chr3L_5_4750001 chr3L_4750001 RAL-367 686 chr3L 4769766 4769800 chr3L 4769886 4769920 6 116 0.5 0.5 0.5 4.0 154 chr3L 4769766 intron RhoGEF64C + chr3L 4769843 intron RhoGEF64C + chr3L 4769920 intron RhoGEF64C + chr3L_6_4765001 chr3L_4765001 RAL-367 687 chr3L 4807344 4807358 chr3L 4808921 4808941 5 1579 5.0 22.0 13.5 0.3 1597 chr3L 4807344 5` UTR CG18808 - chr3L 4808142 exon Dhc64C - chr3L 4808941 exon Dhc64C - chr3L_5_4805001 chr3L_4805001 RAL-367 688 chr3L 4837893 4837919 chr3L 4837972 4837998 5 79 0.0 2.0 1.0 2.5 105 chr3L 4837893 3` UTR CG13707 - chr3L 4837946 3` UTR CG13707 - chr3L 4837998 3` UTR CG13707 - chr3L_5_4835001 chr3L_4835001 RAL-367 689 chr3L 4858304 4858337 chr3L 4858394 4858427 7 90 2.0 4.0 3.0 1.8 123 chr3L 4858304 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858427 intergenic not near genes chr3L_7_4855001 chr3L_4855001 RAL-367 690 chr3L 4907976 4907992 chr3L 4908052 4908062 4 74 1.0 1.0 1.0 2.0 86 chr3L 4907976 intergenic not near genes chr3L 4908019 intergenic not near genes chr3L 4908062 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-367 691 chr3L 4964174 4964188 chr3L 4964269 4964271 4 92 2.5 6.0 4.2 0.8 97 chr3L 4964174 intron Con - chr3L 4964222 intron Con - chr3L 4964271 intron Con - chr3L_4_4960001 chr3L_4960001 RAL-367 692 chr3L 4968874 4968887 chr3L 4969561 4969574 7 687 1.0 1.5 1.2 3.2 700 chr3L 4968874 intron Con - chr3L 4969224 intron Con - chr3L 4969574 intron Con - chr3L_7_4965001 chr3L_4965001 RAL-367 693 chr3L 5063587 5063603 chr3L 5063696 5063697 5 106 0.0 1.0 0.5 3.3 110 chr3L 5063587 intron Con - chr3L 5063642 intron Con - chr3L 5063697 intron Con - chr3L_5_5060001 chr3L_5060001 RAL-367 694 chr3L 5104497 5104508 chr3L 5124631 5124642 4 20134 1.0 2.5 1.8 1.4 20145 chr3L 5104497 intergenic not near genes chr3L 5114570 intergenic not near genes chr3L 5124642 intergenic not near genes chr3L_4_5110001 chr3L_5110001 RAL-367 695 chr3L 5265225 5265256 chr3L 5265417 5265448 8 190 3.0 5.5 4.2 1.5 223 chr3L 5265225 intron shep - chr3L 5265336 intron shep - chr3L 5265448 intron shep - chr3L_8_5265001 chr3L_5265001 RAL-367 696 chr3L 5387668 5387698 chr3L 5387925 5387955 12 256 1.0 2.5 1.8 4.3 287 chr3L 5387668 intergenic not near genes chr3L 5387812 intergenic not near genes chr3L 5387955 intergenic not near genes chr3L_12_5385001 chr3L_5385001 RAL-367 697 chr3L 5526964 5526972 chr3L 5527050 5527058 5 86 5.5 0.0 2.8 1.3 94 chr3L 5526964 intron Lkr - chr3L 5527011 intron Lkr - chr3L 5527058 intron Lkr - chr3L_5_5525001 chr3L_5525001 RAL-367 698 chr3L 5556956 5556975 chr3L 5557057 5557076 4 101 0.5 2.5 1.5 1.6 120 chr3L 5556956 intergenic not near genes chr3L 5557016 intergenic not near genes chr3L 5557076 intergenic not near genes chr3L_4_5555001 chr3L_5555001 RAL-367 699 chr3L 5839575 5839588 chr3L 5839654 5839665 8 78 6.0 3.0 4.5 1.5 90 chr3L 5839575 intron vn - chr3L 5839620 intron vn - chr3L 5839665 intron vn - chr3L_8_5835001 chr3L_5835001 RAL-367 700 chr3L 5847689 5847715 chr3L 5847858 5847884 10 169 4.5 5.0 4.8 1.7 195 chr3L 5847689 intergenic not near genes chr3L 5847786 intergenic not near genes chr3L 5847884 intergenic not near genes chr3L_10_5845001 chr3L_5845001 RAL-367 701 chr3L 5910037 5910058 chr3L 5910278 5910299 pogo 5 241 2.5 2.0 2.2 1.6 262 chr3L 5910037 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910299 intron CG13288 + chr3L_5_5910001 chr3L_5910001 RAL-367 702 chr3L 5926323 5926350 chr3L 5926513 5926540 BS 6 190 3.0 6.0 4.5 1.1 217 chr3L 5926323 intron Vap-33B + chr3L 5926432 intron Vap-33B + chr3L 5926540 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-367 703 chr3L 6001680 6001696 chr3L 6004380 6004396 jockey 6 2700 1.0 0.0 0.5 4.0 2716 chr3L 6001680 intron PVRAP + chr3L 6003038 intron PVRAP + chr3L 6004396 intron PVRAP + chr3L_6_6000001 chr3L_6000001 RAL-367 704 chr3L 6063946 6063965 chr3L 6064030 6064049 4 82 1.0 1.0 1.0 2.0 103 chr3L 6063946 intergenic not near genes chr3L 6063998 intergenic not near genes chr3L 6064049 intergenic not near genes chr3L_4_6060001 chr3L_6060001 RAL-367 705 chr3L 6116699 6116718 chr3L 6116783 6116802 5 83 2.0 1.5 1.8 1.8 103 chr3L 6116699 intron Ets65A + chr3L 6116750 intron Ets65A + chr3L 6116802 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-367 706 chr3L 6159947 6159957 chr3L 6160027 6160037 5 80 3.0 0.0 1.5 2.0 90 chr3L 6159947 intergenic not near genes chr3L 6159992 intergenic not near genes chr3L 6160037 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-367 707 chr3L 6162356 6162385 chr3L 6162436 6162466 6 81 0.0 1.5 0.8 3.3 110 chr3L 6162356 intergenic CR45744 - chr3L 6162411 intergenic CR45744 - chr3L 6162466 intergenic CR45744 - chr3L_6_6160001 chr3L_6160001 RAL-367 708 chr3L 6185602 6185630 chr3L 6185680 6185708 7 78 2.0 1.0 1.5 2.8 106 chr3L 6185602 exon CG43293 + chr3L 6185655 intron CG43293 + chr3L 6185708 exon CG43293 + chr3L_7_6185001 chr3L_6185001 RAL-367 709 chr3L 6220918 6220936 chr3L 6230070 6230088 roo 6 9152 1.5 7.5 4.5 1.1 9170 chr3L 6220918 5` UTR pncr008:3L + chr3L 6225503 intergenic not near genes chr3L 6230088 intergenic not near genes chr3L_6_6225001 chr3L_6225001 RAL-367 710 chr3L 6328505 6328514 chr3L 6328589 6328598 4 84 1.5 4.5 3.0 1.0 93 chr3L 6328505 exon Or65c + chr3L 6328552 intron Or65c + chr3L 6328598 exon Or65c + chr3L_4_6325001 chr3L_6325001 RAL-367 711 chr3L 6358624 6358650 chr3L 6358701 6358727 10 77 3.0 2.5 2.8 2.6 103 chr3L 6358624 intergenic not near genes chr3L 6358676 intergenic not near genes chr3L 6358727 intergenic not near genes chr3L_10_6355001 chr3L_6355001 RAL-367 712 chr3L 6555760 6555858 chr3L 6555840 6555936 8 80 0.0 0.0 0.0 8.0 176 chr3L 6555760 intron CG18769 + chr3L 6555848 intron CG18769 + chr3L 6555936 intron CG18769 + chr3L_8_6555001 chr3L_6555001 RAL-367 713 chr3L 6786890 6786923 chr3L 6786983 6787016 10 92 2.0 2.5 2.2 3.1 126 chr3L 6786890 3` UTR CR45759 - chr3L 6786953 3` UTR CR45759 - chr3L 6787016 3` UTR CR45759 - chr3L_10_6785001 chr3L_6785001 RAL-367 714 chr3L 6855936 6855955 chr3L 6860717 6860738 Doc 5 4784 0.5 2.0 1.2 2.3 4802 chr3L 6855936 intergenic not near genes chr3L 6858337 intergenic not near genes chr3L 6860738 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-367 715 chr3L 6887515 6887546 chr3L 6895007 6895038 roo 8 7492 3.0 1.5 2.2 2.5 7523 chr3L 6887515 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895038 intergenic not near genes chr3L_8_6890001 chr3L_6890001 RAL-367 716 chr3L 6934336 6934364 chr3L 6934447 6934475 6 111 1.0 1.5 1.2 2.7 139 chr3L 6934336 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934475 intron CG14820 + chr3L_6_6930001 chr3L_6930001 RAL-367 717 chr3L 6937218 6937246 chr3L 6937332 6937360 6 114 3.5 1.5 2.5 1.7 142 chr3L 6937218 5` UTR CR45414 + chr3L 6937289 5` UTR CR45414 + chr3L 6937360 5` UTR CR45414 + chr3L_6_6935001 chr3L_6935001 RAL-367 718 chr3L 6974502 6974520 chr3L 6974603 6974621 4 101 0.0 3.0 1.5 1.6 119 chr3L 6974502 intron Galphai - chr3L 6974562 intron Galphai - chr3L 6974621 intron Galphai - chr3L_4_6970001 chr3L_6970001 RAL-367 719 chr3L 6994894 6994914 chr3L 6995505 6995525 BS 5 611 0.0 0.5 0.2 4.2 631 chr3L 6994894 intergenic bin + chr3L 6995210 intergenic not near genes chr3L 6995525 intergenic not near genes chr3L_5_6995001 chr3L_6995001 RAL-367 720 chr3L 7033175 7033200 chr3L 7033254 7033280 14 80 3.5 2.0 2.8 3.7 105 chr3L 7033175 intron Mp + chr3L 7033228 intron Mp + chr3L 7033280 intron Mp + chr3L_14_7030001 chr3L_7030001 RAL-367 721 chr3L 7285453 7285460 chr3L 7285531 7285538 4 78 1.5 3.5 2.5 1.1 85 chr3L 7285453 intron unc-13-4A - chr3L 7285496 intron unc-13-4A - chr3L 7285538 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-367 722 chr3L 7318188 7318210 chr3L 7318283 7318305 4 95 5.5 1.5 3.5 0.9 117 chr3L 7318188 intergenic not near genes chr3L 7318246 intergenic not near genes chr3L 7318305 intergenic not near genes chr3L_4_7315001 chr3L_7315001 RAL-367 723 chr3L 7445862 7445894 chr3L 7445939 7445971 6 76 1.5 2.5 2.0 2.0 109 chr3L 7445862 intron CG42458 + chr3L 7445916 intron CG42458 + chr3L 7445971 intron CG42458 + chr3L_6_7445001 chr3L_7445001 RAL-367 724 chr3L 7484782 7484796 chr3L 7485038 7485052 6 256 2.0 3.5 2.8 1.6 270 chr3L 7484782 intergenic not near genes chr3L 7484917 intergenic not near genes chr3L 7485052 intergenic not near genes chr3L_6_7480001 chr3L_7480001 RAL-367 725 chr3L 7576211 7576239 chr3L 7576299 7576327 6 88 5.5 3.0 4.2 1.2 116 chr3L 7576211 intergenic not near genes chr3L 7576269 intergenic not near genes chr3L 7576327 intergenic not near genes chr3L_6_7575001 chr3L_7575001 RAL-367 726 chr3L 7793713 7793735 chr3L 7800765 7800787 297 6 7052 4.5 4.5 4.5 1.1 7074 chr3L 7793713 intron CG32369 - chr3L 7797250 intron CG32369 - chr3L 7800787 intron CG32369 - chr3L_6_7795001 chr3L_7795001 RAL-367 727 chr3L 7814708 7814731 chr3L 7814793 7814810 4 84 1.5 0.0 0.8 2.2 102 chr3L 7814708 3` UTR Pdp1 - chr3L 7814759 3` UTR Pdp1 - chr3L 7814810 3` UTR Pdp1 - chr3L_4_7810001 chr3L_7810001 RAL-367 728 chr3L 7886519 7886547 chr3L 7889037 7889065 Stalker4 6 2517 0.5 2.0 1.2 2.7 2546 chr3L 7886519 intron CG32365 + chr3L 7887792 intron CG32365 + chr3L 7889065 intron CG32365 + chr3L_6_7885001 chr3L_7885001 RAL-367 729 chr3L 7985384 7985393 chr3L 7987711 7987721 NOF 4 2328 3.5 5.5 4.5 0.7 2337 chr3L 7985384 intron nmo + chr3L 7986552 intron nmo + chr3L 7987721 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-367 730 chr3L 8007180 8007208 chr3L 8007516 8007544 6 336 1.5 1.0 1.2 2.7 364 chr3L 8007180 intron nmo + chr3L 8007362 intron nmo + chr3L 8007544 intron nmo + chr3L_6_8005001 chr3L_8005001 RAL-367 731 chr3L 8019702 8019736 chr3L 8024115 8024149 NOF 7 4412 1.0 1.0 1.0 3.5 4447 chr3L 8019702 intron nmo + chr3L 8021926 intron nmo + chr3L 8024149 intron nmo + chr3L_7_8020001 chr3L_8020001 RAL-367 732 chr3L 8226741 8226750 chr3L 8226840 8226841 4 97 1.0 0.0 0.5 2.7 100 chr3L 8226741 intergenic not near genes chr3L 8226791 intergenic not near genes chr3L 8226841 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-367 733 chr3L 8319440 8319473 chr3L 8319516 8319549 10 74 3.0 3.5 3.2 2.4 109 chr3L 8319440 intergenic CG43059 - chr3L 8319494 intergenic not near genes chr3L 8319549 intergenic not near genes chr3L_10_8315001 chr3L_8315001 RAL-367 734 chr3L 8481788 8481804 chr3L 8490929 8490963 roo 8 9152 2.5 0.0 1.2 3.6 9175 chr3L 8481788 intron CG43163 - chr3L 8486376 intron CG43163 - chr3L 8490963 intron CG43163 - chr3L_8_8485001 chr3L_8485001 RAL-367 735 chr3L 8498302 8498315 chr3L 8505763 8505781 blood 4 7465 2.5 2.5 2.5 1.1 7479 chr3L 8498302 intron CG43163 - chr3L 8502042 intron CG43163 - chr3L 8505781 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-367 736 chr3L 8615032 8615055 chr3L 8615111 8615134 7 79 2.5 2.5 2.5 2.0 102 chr3L 8615032 exon CG6282 + chr3L 8615083 intron CG6282 + chr3L 8615134 intron CG6282 + chr3L_7_8615001 chr3L_8615001 RAL-367 737 chr3L 8707678 8707696 chr3L 8707921 8707939 12 243 3.0 3.5 3.2 2.9 261 chr3L 8707678 intergenic not near genes chr3L 8707808 intergenic not near genes chr3L 8707939 intergenic not near genes chr3L_12_8705001 chr3L_8705001 RAL-367 738 chr3L 8791278 8791292 chr3L 8796698 8796712 I-element 4 5420 3.5 0.0 1.8 1.4 5434 chr3L 8791278 exon Fhos + chr3L 8793995 intron Fhos + chr3L 8796712 intron Fhos + chr3L_4_8790001 chr3L_8790001 RAL-367 739 chr3L 8839727 8839746 chr3L 8839807 8839826 4 80 1.0 0.0 0.5 2.7 99 chr3L 8839727 intron dally + chr3L 8839776 intron dally + chr3L 8839826 intron dally + chr3L_4_8835001 chr3L_8835001 RAL-367 740 chr3L 9076925 9076957 chr3L 9084485 9084517 412 13 7560 7.5 4.0 5.8 1.9 7592 chr3L 9076925 exon Tequila + chr3L 9080721 intron Tequila + chr3L 9084517 exon Tequila + chr3L_13_9080001 chr3L_9080001 RAL-367 741 chr3L 9130557 9130582 chr3L 9134318 9134343 412 6 3761 4.0 3.0 3.5 1.3 3786 chr3L 9130557 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134343 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-367 742 chr3L 9164698 9164722 chr3L 9166165 9166189 hobo 5 1467 0.0 0.5 0.2 4.2 1491 chr3L 9164698 intron Rdl - chr3L 9165444 intron Rdl - chr3L 9166189 intron Rdl - chr3L_5_9165001 chr3L_9165001 RAL-367 743 chr3L 9194146 9194173 chr3L 9194261 9194288 10 114 1.5 1.0 1.2 4.5 142 chr3L 9194146 intergenic not near genes chr3L 9194217 intergenic not near genes chr3L 9194288 intergenic not near genes chr3L_10_9190001 chr3L_9190001 RAL-367 744 chr3L 9219242 9219275 chr3L 9219914 9219947 jockey 10 671 2.5 4.0 3.2 2.4 705 chr3L 9219242 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_10_9215001 chr3L_9215001 RAL-367 745 chr3L 9293866 9293894 chr3L 9293956 9293984 6 89 1.5 0.5 1.0 3.0 118 chr3L 9293866 intergenic not near genes chr3L 9293925 intergenic not near genes chr3L 9293984 intergenic not near genes chr3L_6_9290001 chr3L_9290001 RAL-367 746 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464651 3.0 5.5 4.2 0.8 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-367 747 chr3L 9501703 9501728 chr3L 9502189 9502214 roo 5 486 2.5 2.5 2.5 1.4 511 chr3L 9501703 intron path - chr3L 9501958 intron path - chr3L 9502214 intron path - chr3L_5_9500001 chr3L_9500001 RAL-367 748 chr3L 9567978 9567982 chr3L 9568061 9568072 7 89 0.0 1.5 0.8 3.9 94 chr3L 9567978 intron CG42673 + chr3L 9568025 intron CG42673 + chr3L 9568072 intron CG42673 + chr3L_7_9565001 chr3L_9565001 RAL-367 749 chr3L 9575907 9575920 chr3L 9580985 9580995 jockey 5 5077 9.5 2.5 6.0 0.7 5088 chr3L 9575907 intron CG42673 + chr3L 9578451 intron CG42673 + chr3L 9580995 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-367 750 chr3L 9575921 9575937 chr3L 9580984 9581003 jockey 10 5072 7.5 2.5 5.0 1.7 5082 chr3L 9575921 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581003 intron CG42673 + chr3L_10_9575001 chr3L_9575001 RAL-367 751 chr3L 9637854 9637886 chr3L 9637936 9637968 12 82 1.5 1.0 1.2 5.5 114 chr3L 9637854 intron fry - chr3L 9637911 intron fry - chr3L 9637968 intron fry - chr3L_12_9635001 chr3L_9635001 RAL-367 752 chr3L 9646478 9646503 chr3L 9646598 9646601 4 109 1.0 0.0 0.5 2.7 123 chr3L 9646478 intron,intron fry -,CG33696 + chr3L 9646540 intron,intron fry -,CG33696 + chr3L 9646601 intron,intron fry -,CG33696 + chr3L_4_9645001 chr3L_9645001 RAL-367 753 chr3L 9646807 9646837 chr3L 9646905 9646935 4 98 0.5 2.0 1.2 1.8 128 chr3L 9646807 intron,intron fry -,CG33696 + chr3L 9646871 intron,intron fry -,CG33696 + chr3L 9646935 intron,intron fry -,CG33696 + chr3L_4_9645001 chr3L_9645001 RAL-367 754 chr3L 9675846 9675878 chr3L 9675929 9675961 10 83 2.0 4.0 3.0 2.5 115 chr3L 9675846 intron fry - chr3L 9675904 intron fry - chr3L 9675961 intron fry - chr3L_10_9675001 chr3L_9675001 RAL-367 755 chr3L 9929674 9929696 chr3L 9938454 9938476 roo 12 8779 3.0 0.5 1.8 4.3 8802 chr3L 9929674 intron CG34356 + chr3L 9934075 intron CG34356 + chr3L 9938476 intron CG34356 + chr3L_12_9930001 chr3L_9930001 RAL-367 756 chr3L 9987113 9987142 chr3L 9987191 9987207 5 75 2.0 3.0 2.5 1.4 94 chr3L 9987113 intron dpr6 + chr3L 9987160 intron dpr6 + chr3L 9987207 intron dpr6 + chr3L_5_9985001 chr3L_9985001 RAL-367 757 chr3L 10007191 10007202 chr3L 10007294 10007305 4 103 1.0 1.0 1.0 2.0 114 chr3L 10007191 intron dpr6 + chr3L 10007248 intron dpr6 + chr3L 10007305 intron dpr6 + chr3L_4_10005001 chr3L_10005001 RAL-367 758 chr3L 10127738 10127762 chr3L 10127815 10127838 4 77 3.5 2.5 3.0 1.0 100 chr3L 10127738 intron dpr6 + chr3L 10127788 intron dpr6 + chr3L 10127838 intron dpr6 + chr3L_4_10125001 chr3L_10125001 RAL-367 759 chr3L 10214740 10214831 chr3L 10214827 10214933 8 100 0.0 0.0 0.0 8.0 193 chr3L 10214740 intergenic not near genes chr3L 10214836 intergenic not near genes chr3L 10214933 intergenic not near genes chr3L_8_10210001 chr3L_10210001 RAL-367 760 chr3L 10308738 10308773 chr3L 10308815 10308838 10 76 1.5 1.5 1.5 4.0 100 chr3L 10308738 intergenic not near genes chr3L 10308788 intergenic not near genes chr3L 10308838 intergenic not near genes chr3L_10_10305001 chr3L_10305001 RAL-367 761 chr3L 10310360 10310373 chr3L 10310457 10310463 5 96 1.0 2.0 1.5 2.0 103 chr3L 10310360 intergenic not near genes chr3L 10310412 intergenic not near genes chr3L 10310463 intergenic not near genes chr3L_5_10310001 chr3L_10310001 RAL-367 762 chr3L 10314129 10314152 chr3L 10314215 10314238 4 86 3.0 3.0 3.0 1.0 109 chr3L 10314129 intergenic not near genes chr3L 10314184 intergenic not near genes chr3L 10314238 intergenic not near genes chr3L_4_10310001 chr3L_10310001 RAL-367 763 chr3L 10314488 10314503 chr3L 10314568 10314583 5 80 2.0 3.0 2.5 1.4 95 chr3L 10314488 intergenic not near genes chr3L 10314536 intergenic not near genes chr3L 10314583 intergenic not near genes chr3L_5_10310001 chr3L_10310001 RAL-367 764 chr3L 10326277 10326303 chr3L 10326357 10326382 7 80 0.0 2.5 1.2 3.2 105 chr3L 10326277 intergenic CR45244 + chr3L 10326330 intergenic CR45244 + chr3L 10326382 intergenic CR45244 + chr3L_7_10325001 chr3L_10325001 RAL-367 765 chr3L 10386392 10386415 chr3L 10386469 10386492 6 77 2.5 1.5 2.0 2.0 100 chr3L 10386392 intergenic CR45245 + chr3L 10386442 intergenic CR45245 + chr3L 10386492 5` UTR CR45245 + chr3L_6_10385001 chr3L_10385001 RAL-367 766 chr3L 10414952 10414971 chr3L 10417324 10417343 Doc 5 2372 0.5 3.0 1.8 1.8 2391 chr3L 10414952 intergenic CG12362 + chr3L 10416148 intergenic not near genes chr3L 10417343 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-367 767 chr3L 10417571 10417604 chr3L 10417648 10417681 8 73 1.0 3.0 2.0 2.7 110 chr3L 10417571 intergenic not near genes chr3L 10417626 intergenic not near genes chr3L 10417681 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-367 768 chr3L 10421356 10421381 chr3L 10421512 10421537 7 156 1.5 1.0 1.2 3.2 181 chr3L 10421356 intergenic not near genes chr3L 10421446 intergenic not near genes chr3L 10421537 intergenic not near genes chr3L_7_10420001 chr3L_10420001 RAL-367 769 chr3L 10537230 10537248 chr3L 10537306 10537324 4 76 0.5 1.0 0.8 2.2 94 chr3L 10537230 intron A2bp1 + chr3L 10537277 intron A2bp1 + chr3L 10537324 intron A2bp1 + chr3L_4_10535001 chr3L_10535001 RAL-367 770 chr3L 10571787 10571812 chr3L 10571875 10571900 6 88 0.5 3.5 2.0 2.0 113 chr3L 10571787 intron A2bp1 + chr3L 10571844 intron A2bp1 + chr3L 10571900 intron A2bp1 + chr3L_6_10570001 chr3L_10570001 RAL-367 771 chr3L 10621848 10621879 chr3L 10621935 10621966 5 87 1.0 1.5 1.2 2.3 118 chr3L 10621848 intergenic not near genes chr3L 10621907 intergenic not near genes chr3L 10621966 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-367 772 chr3L 10721991 10722018 chr3L 10722073 10722100 5 82 2.5 0.5 1.5 2.0 109 chr3L 10721991 intergenic not near genes chr3L 10722046 intergenic not near genes chr3L 10722100 intergenic not near genes chr3L_5_10720001 chr3L_10720001 RAL-367 773 chr3L 10762839 10762863 chr3L 10762923 10762947 4 84 2.5 5.5 4.0 0.8 108 chr3L 10762839 intergenic not near genes chr3L 10762893 intergenic not near genes chr3L 10762947 intergenic not near genes chr3L_4_10760001 chr3L_10760001 RAL-367 774 chr3L 11145545 11145549 chr3L 11145633 11145637 4 88 0.0 3.0 1.5 1.6 92 chr3L 11145545 intron CG32082 + chr3L 11145591 intron CG32082 + chr3L 11145637 intron CG32082 + chr3L_4_11145001 chr3L_11145001 RAL-367 775 chr3L 11245096 11245107 chr3L 11245188 11245199 5 92 2.5 4.5 3.5 1.1 103 chr3L 11245096 intergenic not near genes chr3L 11245148 intergenic not near genes chr3L 11245199 intergenic not near genes chr3L_5_11245001 chr3L_11245001 RAL-367 776 chr3L 11329689 11329725 chr3L 11332894 11332930 jockey 6 3201 3.0 3.0 3.0 1.5 3241 chr3L 11329689 intergenic not near genes chr3L 11331310 intergenic not near genes chr3L 11332930 intergenic not near genes chr3L_6_11330001 chr3L_11330001 RAL-367 777 chr3L 11383962 11383996 chr3L 11384041 11384044 9 72 1.0 2.0 1.5 3.6 82 chr3L 11383962 intron CR42755 - chr3L 11384003 3` UTR CR42755 - chr3L 11384044 3` UTR CR42755 - chr3L_9_11380001 chr3L_11380001 RAL-367 778 chr3L 11435563 11435591 chr3L 11435732 11435760 13 169 4.5 2.5 3.5 2.9 197 chr3L 11435563 intergenic CR44548 +,CG6149 - chr3L 11435662 5` UTR CR44548 + chr3L 11435760 5` UTR CR44548 + chr3L_13_11435001 chr3L_11435001 RAL-367 779 chr3L 11528231 11528258 chr3L 11528312 11528339 4 81 0.0 2.0 1.0 2.0 108 chr3L 11528231 intron Mob2 - chr3L 11528285 intron Mob2 - chr3L 11528339 intron Mob2 - chr3L_4_11525001 chr3L_11525001 RAL-367 780 chr3L 11549587 11549608 chr3L 11549812 11549833 8 225 3.0 5.0 4.0 1.6 246 chr3L 11549587 intron Mob2 - chr3L 11549710 intron Mob2 - chr3L 11549833 intron Mob2 - chr3L_8_11545001 chr3L_11545001 RAL-367 781 chr3L 11564792 11564812 chr3L 11572417 11572422 412 4 7621 3.0 6.0 4.5 0.7 7630 chr3L 11564792 exon CG33267 + chr3L 11568607 intron CG33267 + chr3L 11572422 exon CG33267 + chr3L_4_11565001 chr3L_11565001 RAL-367 782 chr3L 11588733 11588751 chr3L 11588888 11588900 5 154 0.5 3.0 1.8 1.8 167 chr3L 11588733 intergenic not near genes chr3L 11588816 intergenic not near genes chr3L 11588900 intergenic not near genes chr3L_5_11585001 chr3L_11585001 RAL-367 783 chr3L 11723081 11723105 chr3L 11727876 11727900 Doc 4 4795 5.5 0.5 3.0 1.0 4819 chr3L 11723081 3` UTR Bmcp + chr3L 11725490 intron Bmcp + chr3L 11727900 3` UTR Bmcp + chr3L_4_11725001 chr3L_11725001 RAL-367 784 chr3L 11741020 11741047 chr3L 11741096 11741102 7 64 1.5 1.0 1.2 3.2 82 chr3L 11741020 intron CG6024 - chr3L 11741061 intron CG6024 - chr3L 11741102 intron CG6024 - chr3L_7_11740001 chr3L_11740001 RAL-367 785 chr3L 802566 802566 chr3L 11777678 11777678 7 10975112 6.5 5.5 6.0 1.0 10975112 chr3L 802566 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_6290001 chr3L_6290001 RAL-367 786 chr3L 7749470 7749471 chr3L 11777678 11777678 5 4028208 3.5 5.5 4.5 0.9 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_9760001 chr3L_9760001 RAL-367 787 chr3L 11846407 11846412 chr3L 11846515 11846520 4 108 0.0 4.0 2.0 1.3 113 chr3L 11846407 intergenic not near genes chr3L 11846464 intergenic not near genes chr3L 11846520 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-367 788 chr3L 11849332 11849355 chr3L 11849432 11849455 8 100 1.5 2.0 1.8 2.9 123 chr3L 11849332 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849455 intergenic not near genes chr3L_8_11845001 chr3L_11845001 RAL-367 789 chr3L 12013911 12013934 chr3L 12014002 12014025 9 88 2.5 0.5 1.5 3.6 114 chr3L 12013911 intron rols - chr3L 12013968 intron rols - chr3L 12014025 intron rols - chr3L_9_12010001 chr3L_12010001 RAL-367 790 chr3L 12052703 12052736 chr3L 12052792 12052825 8 89 2.0 3.0 2.5 2.3 122 chr3L 12052703 intron rols - chr3L 12052764 intron rols - chr3L 12052825 intron rols - chr3L_8_12050001 chr3L_12050001 RAL-367 791 chr3L 12089083 12089102 chr3L 12089163 12089182 7 80 4.0 2.5 3.2 1.7 99 chr3L 12089083 3` UTR CG17154 + chr3L 12089132 3` UTR CG17154 + chr3L 12089182 3` UTR CG17154 + chr3L_7_12085001 chr3L_12085001 RAL-367 792 chr3L 12119758 12119786 chr3L 12119855 12119883 5 97 0.0 0.5 0.2 4.2 125 chr3L 12119758 3` UTR ssp + chr3L 12119820 intergenic ssp +,CG11560 + chr3L 12119883 intergenic ssp +,CG11560 + chr3L_5_12115001 chr3L_12115001 RAL-367 793 chr3L 12235925 12235944 chr3L 12238107 12238126 5 2182 5.5 4.0 4.8 0.9 2201 chr3L 12235925 intron app - chr3L 12237026 intron app - chr3L 12238126 intron app - chr3L_5_12235001 chr3L_12235001 RAL-367 794 chr3L 12366240 12366264 chr3L 12367151 12367160 6 899 16.0 31.0 23.5 0.2 920 chr3L 12366240 intergenic not near genes chr3L 12366700 intergenic not near genes chr3L 12367160 intergenic not near genes chr3L_6_12365001 chr3L_12365001 RAL-367 795 chr3L 12612576 12612612 chr3L 12612669 12612705 14 92 3.0 4.0 3.5 3.1 129 chr3L 12612576 intron caup + chr3L 12612640 intron caup + chr3L 12612705 intron caup + chr3L_14_12610001 chr3L_12610001 RAL-367 796 chr3L 12654381 12654404 chr3L 12654461 12654467 7 77 3.5 0.5 2.0 2.3 86 chr3L 12654381 intergenic not near genes chr3L 12654424 intergenic not near genes chr3L 12654467 intergenic not near genes chr3L_7_12650001 chr3L_12650001 RAL-367 797 chr3L 12874960 12874963 chr3L 12877252 12877255 jockey 4 2292 0.0 1.5 0.8 2.2 2295 chr3L 12874960 intergenic not near genes chr3L 12876108 intergenic not near genes chr3L 12877255 intergenic not near genes chr3L_4_12875001 chr3L_12875001 RAL-367 798 chr3L 12894801 12894818 chr3L 12894879 12894896 6 78 6.0 4.5 5.2 1.0 95 chr3L 12894801 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894896 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-367 799 chr3L 12919274 12919305 chr3L 12924747 12924778 Rt1c 10 5473 2.0 3.5 2.8 2.6 5504 chr3L 12919274 intergenic not near genes chr3L 12922026 intergenic not near genes chr3L 12924778 intergenic not near genes chr3L_10_12920001 chr3L_12920001 RAL-367 800 chr3L 12929730 12929742 chr3L 12930046 12930058 4 316 0.0 0.5 0.2 3.3 328 chr3L 12929730 intergenic not near genes chr3L 12929894 intergenic not near genes chr3L 12930058 intergenic not near genes chr3L_4_12925001 chr3L_12925001 RAL-367 801 chr3L 12955137 12955160 chr3L 12955213 12955236 4 76 1.0 3.0 2.0 1.3 99 chr3L 12955137 intergenic CG10752 - chr3L 12955186 intergenic not near genes chr3L 12955236 intergenic not near genes chr3L_4_12955001 chr3L_12955001 RAL-367 802 chr3L 12957806 12957818 chr3L 12962288 12962298 copia 5 4482 1.5 3.5 2.5 1.4 4492 chr3L 12957806 intergenic not near genes chr3L 12960052 intergenic not near genes chr3L 12962298 intergenic not near genes chr3L_5_12960001 chr3L_12960001 RAL-367 803 chr3L 13007699 13007718 chr3L 13007771 13007797 4 77 0.5 1.0 0.8 2.2 98 chr3L 13007699 exon CG11263 + chr3L 13007748 3` UTR CG11263 + chr3L 13007797 3` UTR CG11263 + chr3L_4_13005001 chr3L_13005001 RAL-367 804 chr3L 13056717 13056730 chr3L 13056802 13056803 4 82 0.0 1.0 0.5 2.7 86 chr3L 13056717 intergenic not near genes chr3L 13056760 intergenic not near genes chr3L 13056803 intergenic not near genes chr3L_4_13055001 chr3L_13055001 RAL-367 805 chr3L 13073805 13073838 chr3L 13073905 13073941 8 101 3.5 1.0 2.2 2.5 136 chr3L 13073805 intergenic not near genes chr3L 13073873 intergenic not near genes chr3L 13073941 intergenic not near genes chr3L_8_13070001 chr3L_13070001 RAL-367 806 chr3L 13074393 13074404 chr3L 13074487 13074498 5 94 8.0 4.5 6.2 0.7 105 chr3L 13074393 intergenic not near genes chr3L 13074446 intergenic not near genes chr3L 13074498 intergenic not near genes chr3L_5_13070001 chr3L_13070001 RAL-367 807 chr3L 13206237 13206257 chr3L 13206319 13206339 7 82 2.5 3.0 2.8 1.8 102 chr3L 13206237 intergenic not near genes chr3L 13206288 intergenic not near genes chr3L 13206339 intergenic not near genes chr3L_7_13205001 chr3L_13205001 RAL-367 808 chr3L 13374251 13374274 chr3L 13374340 13374363 6 89 2.5 4.0 3.2 1.4 112 chr3L 13374251 intergenic not near genes chr3L 13374307 intergenic not near genes chr3L 13374363 intergenic not near genes chr3L_6_13370001 chr3L_13370001 RAL-367 809 chr3L 13375030 13375053 chr3L 13375123 13375146 4 93 2.0 1.5 1.8 1.4 116 chr3L 13375030 intergenic not near genes chr3L 13375088 intergenic not near genes chr3L 13375146 intergenic not near genes chr3L_4_13375001 chr3L_13375001 RAL-367 810 chr3L 13406271 13406294 chr3L 13406354 13406371 7 81 6.5 4.0 5.2 1.1 100 chr3L 13406271 intergenic not near genes chr3L 13406321 intergenic not near genes chr3L 13406371 intergenic not near genes chr3L_7_13405001 chr3L_13405001 RAL-367 811 chr3L 13525164 13525178 chr3L 13532960 13532967 roo 5 7795 5.5 3.0 4.2 1.0 7803 chr3L 13525164 intergenic not near genes chr3L 13529066 intergenic not near genes chr3L 13532967 intergenic not near genes chr3L_5_13525001 chr3L_13525001 RAL-367 812 chr3L 13554472 13554492 chr3L 13556815 13556835 5 2343 10.5 17.0 13.8 0.3 2363 chr3L 13554472 intron bru-3 - chr3L 13555654 intron bru-3 - chr3L 13556835 intron bru-3 - chr3L_5_13555001 chr3L_13555001 RAL-367 813 chr3L 13560631 13560646 chr3L 13560709 13560724 5 78 1.5 6.5 4.0 1.0 93 chr3L 13560631 intron bru-3 - chr3L 13560678 intron bru-3 - chr3L 13560724 intron bru-3 - chr3L_5_13560001 chr3L_13560001 RAL-367 814 chr3L 13629531 13629545 chr3L 13629638 13629656 6 110 3.0 4.5 3.8 1.2 125 chr3L 13629531 intron bru-3 - chr3L 13629594 intron bru-3 - chr3L 13629656 intron bru-3 - chr3L_6_13625001 chr3L_13625001 RAL-367 815 chr3L 13740039 13740053 chr3L 13740131 13740145 5 92 2.5 4.0 3.2 1.2 106 chr3L 13740039 intron bru-3 - chr3L 13740092 intron bru-3 - chr3L 13740145 intron bru-3 - chr3L_5_13740001 chr3L_13740001 RAL-367 816 chr3L 13789813 13789825 chr3L 13789964 13789980 4 153 4.5 2.5 3.5 0.9 167 chr3L 13789813 intron bru-3 - chr3L 13789896 intron bru-3 - chr3L 13789980 intron bru-3 - chr3L_4_13785001 chr3L_13785001 RAL-367 817 chr3L 13804544 13804576 chr3L 13822830 13822862 roo 4 18286 1.0 3.5 2.2 1.2 18318 chr3L 13804544 intergenic not near genes chr3L 13813703 intergenic not near genes chr3L 13822862 intergenic not near genes chr3L_4_13810001 chr3L_13810001 RAL-367 818 chr3L 13988478 13988495 chr3L 13988599 13988616 6 121 1.0 1.0 1.0 3.0 138 chr3L 13988478 intron,3` UTR CG17364 -,CG9040 + chr3L 13988547 intron,3` UTR CG17364 -,CG9040 + chr3L 13988616 intron,3` UTR CG17364 -,CG9040 + chr3L_6_13985001 chr3L_13985001 RAL-367 819 chr3L 14180739 14180766 chr3L 14180815 14180842 5 76 2.0 3.5 2.8 1.3 103 chr3L 14180739 intergenic not near genes chr3L 14180790 intergenic not near genes chr3L 14180842 intergenic not near genes chr3L_5_14180001 chr3L_14180001 RAL-367 820 chr3L 14245575 14245589 chr3L 14245661 14245683 1360 4 92 6.5 3.5 5.0 0.7 108 chr3L 14245575 3` UTR CR44561 - chr3L 14245629 3` UTR CR44561 - chr3L 14245683 3` UTR CR44561 - chr3L_4_14245001 chr3L_14245001 RAL-367 821 chr3L 14267371 14267387 chr3L 14271811 14271827 F-element 6 4440 4.5 1.5 3.0 1.5 4456 chr3L 14267371 intergenic not near genes chr3L 14269599 intergenic not near genes chr3L 14271827 intergenic not near genes chr3L_6_14265001 chr3L_14265001 RAL-367 822 chr3L 14282586 14282606 chr3L 14282666 14282680 10 77 2.5 3.0 2.8 2.6 94 chr3L 14282586 intron fz + chr3L 14282633 intron fz + chr3L 14282680 intron fz + chr3L_10_14280001 chr3L_14280001 RAL-367 823 chr3L 14286657 14286677 chr3L 14286736 14286756 5 79 0.5 1.0 0.8 2.8 99 chr3L 14286657 intron fz + chr3L 14286706 intron fz + chr3L 14286756 intron fz + chr3L_5_14285001 chr3L_14285001 RAL-367 824 chr3L 14295984 14296016 chr3L 14296470 14296502 roo 9 486 2.5 1.0 1.8 3.2 518 chr3L 14295984 intron fz + chr3L 14296243 intron fz + chr3L 14296502 intron fz + chr3L_9_14295001 chr3L_14295001 RAL-367 825 chr3L 14320635 14320664 chr3L 14320773 14320802 4 138 1.0 2.0 1.5 1.6 167 chr3L 14320635 intron fz + chr3L 14320718 intron fz + chr3L 14320802 intron fz + chr3L_4_14320001 chr3L_14320001 RAL-367 826 chr3L 14411884 14411898 chr3L 14411951 14411977 4 76 2.5 3.5 3.0 1.0 93 chr3L 14411884 intron CG3919 + chr3L 14411930 intron CG3919 + chr3L 14411977 intron CG3919 + chr3L_4_14410001 chr3L_14410001 RAL-367 827 chr3L 14855585 14855613 chr3L 14855673 14855701 4 88 3.0 5.0 4.0 0.8 116 chr3L 14855585 intron CG17839 + chr3L 14855643 intron CG17839 + chr3L 14855701 intron CG17839 + chr3L_4_14855001 chr3L_14855001 RAL-367 828 chr3L 14863794 14863809 chr3L 14863891 14863906 5 97 5.0 3.0 4.0 1.0 112 chr3L 14863794 intron CG17839 + chr3L 14863850 intron CG17839 + chr3L 14863906 intron CG17839 + chr3L_5_14860001 chr3L_14860001 RAL-367 829 chr3L 14922101 14922120 chr3L 14922209 14922223 5 103 8.0 4.5 6.2 0.7 122 chr3L 14922101 intron DCX-EMAP + chr3L 14922162 intron DCX-EMAP + chr3L 14922223 intron DCX-EMAP + chr3L_5_14920001 chr3L_14920001 RAL-367 830 chr3L 15085052 15085064 chr3L 15086217 15086230 1360 5 1165 2.5 3.0 2.8 1.3 1178 chr3L 15085052 intron cp309 - chr3L 15085641 intron cp309 - chr3L 15086230 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-367 831 chr3L 15151217 15151239 chr3L 15151401 15151423 8 184 1.0 3.0 2.0 2.7 206 chr3L 15151217 intron FucTA + chr3L 15151320 intron FucTA + chr3L 15151423 intron FucTA + chr3L_8_15150001 chr3L_15150001 RAL-367 832 chr3L 15164860 15165045 chr3L 15164944 15165144 4 88 0.5 0.5 0.5 2.7 284 chr3L 15164860 intergenic not near genes chr3L 15165002 intergenic not near genes chr3L 15165144 intergenic not near genes chr3L_4_15160001 chr3L_15160001 RAL-367 833 chr3L 15233557 15233574 chr3L 15233638 15233655 4 81 1.5 0.0 0.8 2.2 98 chr3L 15233557 intergenic not near genes chr3L 15233606 intergenic not near genes chr3L 15233655 intergenic not near genes chr3L_4_15230001 chr3L_15230001 RAL-367 834 chr3L 15257434 15257451 chr3L 15257647 15257664 6 213 2.0 1.0 1.5 2.4 230 chr3L 15257434 intergenic not near genes chr3L 15257549 intergenic not near genes chr3L 15257664 intergenic not near genes chr3L_6_15255001 chr3L_15255001 RAL-367 835 chr3L 15291472 15291504 chr3L 15291558 15291590 4 86 10.0 7.5 8.8 0.4 118 chr3L 15291472 intergenic not near genes chr3L 15291531 intergenic not near genes chr3L 15291590 intergenic not near genes chr3L_4_15290001 chr3L_15290001 RAL-367 836 chr3L 15480546 15480577 chr3L 15480990 15481021 4 444 1.0 5.0 3.0 1.0 475 chr3L 15480546 intergenic not near genes chr3L 15480784 intergenic not near genes chr3L 15481021 intergenic not near genes chr3L_4_15480001 chr3L_15480001 RAL-367 837 chr3L 15541620 15541650 chr3L 15541711 15541741 7 89 0.5 0.5 0.5 4.7 121 chr3L 15541620 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541741 intron CrebA + chr3L_7_15540001 chr3L_15540001 RAL-367 838 chr3L 15633192 15633202 chr3L 15633272 15633282 4 80 3.0 0.5 1.8 1.4 90 chr3L 15633192 intron comm3 - chr3L 15633237 intron comm3 - chr3L 15633282 intron comm3 - chr3L_4_15630001 chr3L_15630001 RAL-367 839 chr3L 15740165 15740182 chr3L 15740243 15740260 4 78 2.0 0.5 1.2 1.8 95 chr3L 15740165 intergenic not near genes chr3L 15740212 intergenic not near genes chr3L 15740260 intergenic not near genes chr3L_4_15740001 chr3L_15740001 RAL-367 840 chr3L 15832254 15832286 chr3L 15832335 15832366 11 81 2.5 2.0 2.2 3.4 112 chr3L 15832254 intergenic CG12713 +,dbo + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832366 intergenic CG12713 +,dbo + chr3L_11_15830001 chr3L_15830001 RAL-367 841 chr3L 15875636 15875669 chr3L 15875799 15875831 9 162 2.0 3.0 2.5 2.6 195 chr3L 15875636 intron pHCl - chr3L 15875734 intron pHCl - chr3L 15875831 intron pHCl - chr3L_9_15875001 chr3L_15875001 RAL-367 842 chr3L 15899221 15899238 chr3L 15899787 15899795 jockey 4 564 1.5 1.0 1.2 1.8 574 chr3L 15899221 intergenic pHCl - chr3L 15899508 intergenic pHCl - chr3L 15899795 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-367 843 chr3L 15924298 15924303 chr3L 15941075 15941094 roo 4 16780 21.0 19.5 20.2 0.2 16796 chr3L 15924298 5` UTR sff - chr3L 15932696 intron Pka-C3 - chr3L 15941094 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 RAL-367 844 chr3L 15946499 15946536 chr3L 15946585 15946622 8 86 2.0 1.0 1.5 3.2 123 chr3L 15946499 intron Pka-C3 - chr3L 15946560 intron Pka-C3 - chr3L 15946622 intron Pka-C3 - chr3L_8_15945001 chr3L_15945001 RAL-367 845 chr3L 16184108 16184136 chr3L 16188927 16188955 X-element 8 4826 0.0 2.5 1.2 3.6 4847 chr3L 16184108 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188955 intergenic not near genes chr3L_8_16185001 chr3L_16185001 RAL-367 846 chr3L 16334195 16334222 chr3L 16334278 16334305 6 83 2.0 5.0 3.5 1.3 110 chr3L 16334195 intergenic CG13056 + chr3L 16334250 intergenic CG13056 + chr3L 16334305 intergenic not near genes chr3L_6_16330001 chr3L_16330001 RAL-367 847 chr3L 16340263 16340290 chr3L 16340387 16340414 7 124 3.0 2.5 2.8 1.8 151 chr3L 16340263 intron CG4998 + chr3L 16340338 intron CG4998 + chr3L 16340414 intron CG4998 + chr3L_7_16340001 chr3L_16340001 RAL-367 848 chr3L 16443853 16443871 chr3L 16446193 16446211 Doc 4 2340 7.0 2.5 4.8 0.7 2358 chr3L 16443853 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446211 intron,intron CG33158 +,dsx-c73A - chr3L_4_16445001 chr3L_16445001 RAL-367 849 chr3L 16457530 16457558 chr3L 16457625 16457644 6 93 1.0 5.0 3.0 1.5 114 chr3L 16457530 intron CG33158 + chr3L 16457587 intron CG33158 + chr3L 16457644 intron CG33158 + chr3L_6_16455001 chr3L_16455001 RAL-367 850 chr3L 16818755 16818780 chr3L 16818831 16818856 6 76 2.5 5.0 3.8 1.2 101 chr3L 16818755 intron,intron nudC +,CG13024 - chr3L 16818806 intron,intron nudC +,CG13024 - chr3L 16818856 intron,intron nudC +,CG13024 - chr3L_6_16815001 chr3L_16815001 RAL-367 851 chr3L 16945726 16945758 chr3L 16954879 16954893 roo 17 9150 5.5 4.5 5.0 2.8 9167 chr3L 16945726 exon Obp73a + chr3L 16950310 intergenic not near genes chr3L 16954893 5` UTR Nc73EF + chr3L_17_16950001 chr3L_16950001 RAL-367 852 chr3L 17026791 17026820 chr3L 17026872 17026888 5 76 2.5 3.0 2.8 1.3 97 chr3L 17026791 exon Fit2 + chr3L 17026840 3` UTR Fit2 + chr3L 17026888 3` UTR Fit2 + chr3L_5_17025001 chr3L_17025001 RAL-367 853 chr3L 17085009 17085031 chr3L 17094158 17094180 roo 6 9149 3.5 2.0 2.8 1.6 9171 chr3L 17085009 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094180 intron Rbp6 - chr3L_6_17085001 chr3L_17085001 RAL-367 854 chr3L 17120657 17120684 chr3L 17120733 17120760 5 76 1.5 2.0 1.8 1.8 103 chr3L 17120657 intron Rbp6 - chr3L 17120708 intron Rbp6 - chr3L 17120760 intron Rbp6 - chr3L_5_17120001 chr3L_17120001 RAL-367 855 chr3L 17516981 17517001 chr3L 17524539 17524559 412 10 7557 4.5 1.5 3.0 2.5 7578 chr3L 17516981 intron CG7564 + chr3L 17520770 intron CG7564 + chr3L 17524559 3` UTR CG7564 + chr3L_10_17520001 chr3L_17520001 RAL-367 856 chr3L 17789851 17789873 chr3L 17789927 17789949 4 76 0.5 1.0 0.8 2.2 98 chr3L 17789851 intergenic not near genes chr3L 17789900 intergenic not near genes chr3L 17789949 intergenic not near genes chr3L_4_17785001 chr3L_17785001 RAL-367 857 chr3L 17827286 17827319 chr3L 17827377 17827404 5 90 1.0 1.5 1.2 2.3 118 chr3L 17827286 intron Grd + chr3L 17827345 intron Grd + chr3L 17827404 intron Grd + chr3L_5_17825001 chr3L_17825001 RAL-367 858 chr3L 17896617 17896637 chr3L 17896694 17896714 4 77 2.0 2.5 2.2 1.2 97 chr3L 17896617 intergenic not near genes chr3L 17896666 intergenic not near genes chr3L 17896714 intergenic not near genes chr3L_4_17895001 chr3L_17895001 RAL-367 859 chr3L 17939069 17939096 chr3L 17939169 17939196 8 100 1.0 3.5 2.2 2.5 127 chr3L 17939069 intron CG43174 + chr3L 17939132 intron CG43174 + chr3L 17939196 intron CG43174 + chr3L_8_17935001 chr3L_17935001 RAL-367 860 chr3L 18034702 18034709 chr3L 18034785 18034792 4 83 1.0 4.0 2.5 1.1 90 chr3L 18034702 intron Eip75B - chr3L 18034747 intron Eip75B - chr3L 18034792 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-367 861 chr3L 18092790 18092801 chr3L 18092905 18092916 4 115 2.0 0.0 1.0 2.0 126 chr3L 18092790 intron CG13698 - chr3L 18092853 intron CG13698 - chr3L 18092916 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-367 862 chr3L 18248952 18248988 chr3L 18249050 18249086 8 98 1.0 2.5 1.8 2.9 134 chr3L 18248952 intergenic not near genes chr3L 18249019 intergenic not near genes chr3L 18249086 intergenic not near genes chr3L_8_18245001 chr3L_18245001 RAL-367 863 chr3L 18267841 18267853 chr3L 18267918 18267930 4 77 1.5 0.5 1.0 2.0 89 chr3L 18267841 intergenic not near genes chr3L 18267886 intergenic not near genes chr3L 18267930 intergenic not near genes chr3L_4_18265001 chr3L_18265001 RAL-367 864 chr3L 9013689 9013693 chr3L 18417066 18417066 4 9403376 18.0 17.5 17.8 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-367 865 chr3L 18464487 18464512 chr3L 18464573 18464598 10 85 3.5 1.0 2.2 3.1 111 chr3L 18464487 intergenic not near genes chr3L 18464542 intergenic not near genes chr3L 18464598 intergenic not near genes chr3L_10_18460001 chr3L_18460001 RAL-367 866 chr3L 18479062 18479082 chr3L 18479164 18479171 5 95 2.5 1.0 1.8 1.8 109 chr3L 18479062 5` UTR CR44673 + chr3L 18479116 5` UTR CR44673 + chr3L 18479171 5` UTR CR44673 + chr3L_5_18475001 chr3L_18475001 RAL-367 867 chr3L 18484680 18484687 chr3L 18488649 18488666 7 3973 10.5 20.0 15.2 0.4 3986 chr3L 18484680 intergenic AstC-R2 - chr3L 18486673 3` UTR AstC-R2 - chr3L 18488666 exon AstC-R2 - chr3L_7_18485001 chr3L_18485001 RAL-367 868 chr3L 18506131 18506150 chr3L 18509594 18509613 F-element 5 3463 3.5 0.5 2.0 1.7 3482 chr3L 18506131 intergenic not near genes chr3L 18507872 intergenic not near genes chr3L 18509613 intergenic not near genes chr3L_5_18505001 chr3L_18505001 RAL-367 869 chr3L 18721772 18721803 chr3L 18721863 18721894 8 91 2.0 2.0 2.0 2.7 122 chr3L 18721772 intergenic CG12477 - chr3L 18721833 intergenic CG12477 - chr3L 18721894 3` UTR CG12477 - chr3L_8_18720001 chr3L_18720001 RAL-367 870 chr3L 18772410 18772435 chr3L 18781091 18781116 roo 8 8681 2.0 2.0 2.0 2.7 8706 chr3L 18772410 intron ftz-f1 - chr3L 18776763 intron ftz-f1 - chr3L 18781116 intron ftz-f1 - chr3L_8_18775001 chr3L_18775001 RAL-367 871 chr3L 18797313 18797337 chr3L 18797397 18797421 6 84 0.5 2.0 1.2 2.7 108 chr3L 18797313 intron ftz-f1 - chr3L 18797367 intron ftz-f1 - chr3L 18797421 intron ftz-f1 - chr3L_6_18795001 chr3L_18795001 RAL-367 872 chr3L 18965021 18965040 chr3L 18965110 18965139 10 98 0.5 3.0 1.8 3.6 118 chr3L 18965021 intergenic not near genes chr3L 18965080 intergenic not near genes chr3L 18965139 intergenic not near genes chr3L_10_18965001 chr3L_18965001 RAL-367 873 chr3L 19008834 19008874 chr3L 19009176 19009212 jockey 6 338 0.0 1.0 0.5 4.0 378 chr3L 19008834 intron nkd - chr3L 19009023 intron nkd - chr3L 19009212 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-367 874 chr3L 19115642 19115671 chr3L 19115818 19115850 BS 11 178 2.0 4.0 3.0 2.8 208 chr3L 19115642 intron CG14082 - chr3L 19115746 intron CG14082 - chr3L 19115850 intron CG14082 - chr3L_11_19115001 chr3L_19115001 RAL-367 875 chr3L 19117040 19117075 chr3L 19124487 19124522 mdg1 10 7447 3.0 0.5 1.8 3.6 7482 chr3L 19117040 intron CG14082 - chr3L 19120781 intron CG14082 - chr3L 19124522 intron CG14082 - chr3L_10_19120001 chr3L_19120001 RAL-367 876 chr3L 19135090 19135124 chr3L 19135242 19135276 5 152 1.0 1.0 1.0 2.5 186 chr3L 19135090 intron CG14082 - chr3L 19135183 intron CG14082 - chr3L 19135276 intron CG14082 - chr3L_5_19135001 chr3L_19135001 RAL-367 877 chr3L 19182392 19182416 chr3L 19182473 19182497 4 81 1.0 2.0 1.5 1.6 105 chr3L 19182392 intron fz2 - chr3L 19182444 intron fz2 - chr3L 19182497 intron fz2 - chr3L_4_19180001 chr3L_19180001 RAL-367 878 chr3L 19208058 19208087 chr3L 19209432 19209461 Doc 14 1373 1.5 1.5 1.5 5.6 1403 chr3L 19208058 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209461 intron fz2 - chr3L_14_19205001 chr3L_19205001 RAL-367 879 chr3L 19269818 19269848 chr3L 19270022 19270052 5 204 3.0 4.5 3.8 1.0 234 chr3L 19269818 intron,exon CG14085 +,CG14088 - chr3L 19269935 intron,exon CG14085 +,CG14088 - chr3L 19270052 intron,exon CG14085 +,CG14088 - chr3L_5_19265001 chr3L_19265001 RAL-367 880 chr3L 19454040 19454055 chr3L 19454156 19454174 4 116 5.5 3.5 4.5 0.7 134 chr3L 19454040 intergenic not near genes chr3L 19454107 intergenic not near genes chr3L 19454174 intergenic not near genes chr3L_4_19450001 chr3L_19450001 RAL-367 881 chr3L 19513287 19513319 chr3L 19513507 19513539 8 219 2.0 2.5 2.2 2.5 252 chr3L 19513287 intergenic not near genes chr3L 19513413 intergenic not near genes chr3L 19513539 intergenic not near genes chr3L_8_19510001 chr3L_19510001 RAL-367 882 chr3L 19527929 19527959 chr3L 19528008 19528029 5 77 3.0 2.5 2.8 1.3 100 chr3L 19527929 intergenic not near genes chr3L 19527979 intergenic not near genes chr3L 19528029 intergenic not near genes chr3L_5_19525001 chr3L_19525001 RAL-367 883 chr3L 19848505 19848532 chr3L 19857695 19857723 roo 5 9191 3.5 2.5 3.0 1.2 9218 chr3L 19848505 intron Papss + chr3L 19853114 intron Papss + chr3L 19857723 intron Papss + chr3L_5_19850001 chr3L_19850001 RAL-367 884 chr3L 19861827 19861853 chr3L 19863615 19863641 S-element 7 1788 1.0 3.0 2.0 2.3 1814 chr3L 19861827 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_7_19860001 chr3L_19860001 RAL-367 885 chr3L 19961281 19961306 chr3L 19961492 19961517 7 211 1.5 1.0 1.2 3.2 236 chr3L 19961281 intron Ac76E + chr3L 19961399 intron Ac76E + chr3L 19961517 intron Ac76E + chr3L_7_19960001 chr3L_19960001 RAL-367 886 chr3L 19962946 19962982 chr3L 19963024 19963060 5 77 0.5 5.5 3.0 1.2 114 chr3L 19962946 intron Ac76E + chr3L 19963003 intron Ac76E + chr3L 19963060 intron Ac76E + chr3L_5_19960001 chr3L_19960001 RAL-367 887 chr3L 20143080 20143110 chr3L 20143160 20143190 6 80 3.0 2.0 2.5 1.7 110 chr3L 20143080 intergenic not near genes chr3L 20143135 intergenic not near genes chr3L 20143190 intergenic not near genes chr3L_6_20140001 chr3L_20140001 RAL-367 888 chr3L 20158912 20158932 chr3L 20159054 20159074 5 142 0.5 2.5 1.5 2.0 162 chr3L 20158912 intron CG42674 - chr3L 20158993 intron CG42674 - chr3L 20159074 intron CG42674 - chr3L_5_20155001 chr3L_20155001 RAL-367 889 chr3L 20257334 20257361 chr3L 20258454 20258481 pogo 7 1120 0.0 0.5 0.2 5.8 1147 chr3L 20257334 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258481 intron rdgC + chr3L_7_20255001 chr3L_20255001 RAL-367 890 chr3L 20262805 20262827 chr3L 20262908 20262939 8 108 4.0 2.5 3.2 1.9 134 chr3L 20262805 exon rdgC + chr3L 20262872 intron rdgC + chr3L 20262939 intron rdgC + chr3L_8_20260001 chr3L_20260001 RAL-367 891 chr3L 20386955 20386972 chr3L 20387057 20387057 4 98 1.0 1.5 1.2 1.8 102 chr3L 20386955 intron fbl + chr3L 20387006 intron fbl + chr3L 20387057 intron fbl + chr3L_4_20385001 chr3L_20385001 RAL-367 892 chr3L 20590064 20590096 chr3L 20590603 20590635 412 8 535 1.0 4.5 2.8 2.1 571 chr3L 20590064 intergenic not near genes chr3L 20590350 intergenic not near genes chr3L 20590635 intergenic not near genes chr3L_8_20590001 chr3L_20590001 RAL-367 893 chr3L 20710758 20710789 chr3L 20710835 20710866 6 77 1.5 1.5 1.5 2.4 108 chr3L 20710758 intergenic not near genes chr3L 20710812 intergenic not near genes chr3L 20710866 intergenic not near genes chr3L_6_20710001 chr3L_20710001 RAL-367 894 chr3L 21007455 21007488 chr3L 21007536 21007564 7 79 2.5 2.0 2.2 2.2 109 chr3L 21007455 intron skd - chr3L 21007510 intron skd - chr3L 21007564 intron skd - chr3L_7_21005001 chr3L_21005001 RAL-367 895 chr3L 21057139 21057159 chr3L 21057355 21057375 4 216 2.0 0.5 1.2 1.8 236 chr3L 21057139 intron siz + chr3L 21057257 intron siz + chr3L 21057375 intron siz + chr3L_4_21055001 chr3L_21055001 RAL-367 896 chr3L 21067953 21067981 chr3L 21068033 21068061 6 80 2.0 1.5 1.8 2.1 108 chr3L 21067953 intron siz + chr3L 21068007 intron siz + chr3L 21068061 intron siz + chr3L_6_21065001 chr3L_21065001 RAL-367 897 chr3L 21082226 21082240 chr3L 21082303 21082318 4 78 1.0 7.5 4.2 0.8 92 chr3L 21082226 intron ko - chr3L 21082272 intron ko - chr3L 21082318 intron ko - chr3L_4_21080001 chr3L_21080001 RAL-367 898 chr3L 21130568 21130593 chr3L 21130762 21130787 5 194 0.5 2.0 1.2 2.3 219 chr3L 21130568 intron ko - chr3L 21130678 intron ko - chr3L 21130787 intron ko - chr3L_5_21130001 chr3L_21130001 RAL-367 899 chr3L 21151883 21151896 chr3L 21156957 21156980 flea 4 5082 2.0 0.0 1.0 2.0 5097 chr3L 21151883 intron Ac78C - chr3L 21154432 intron Ac78C - chr3L 21156980 intron Ac78C - chr3L_4_21150001 chr3L_21150001 RAL-367 900 chr3L 21243754 21243764 chr3L 21251317 21251327 412 4 7563 4.0 5.5 4.8 0.7 7573 chr3L 21243754 intron Eip78C + chr3L 21247540 intron Eip78C + chr3L 21251327 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-367 901 chr3L 21301730 21301759 chr3L 21301816 21301845 15 86 4.0 5.0 4.5 2.7 115 chr3L 21301730 5` UTR CR45432 + chr3L 21301788 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301845 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_15_21300001 chr3L_21300001 RAL-367 902 chr3L 21319530 21319556 chr3L 21319620 21319646 6 90 3.5 1.0 2.2 1.9 116 chr3L 21319530 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319646 5` UTR Rab26 + chr3L_6_21315001 chr3L_21315001 RAL-367 903 chr3L 21415138 21415164 chr3L 21415221 21415231 12 82 2.5 2.0 2.2 3.8 93 chr3L 21415138 intron rgn + chr3L 21415184 intron rgn + chr3L 21415231 intron rgn + chr3L_12_21415001 chr3L_21415001 RAL-367 904 chr3L 21498842 21498861 chr3L 21500477 21500497 1360 5 1635 1.0 3.5 2.2 1.6 1655 chr3L 21498842 intron Glg1 - chr3L 21499670 intron Glg1 - chr3L 21500497 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-367 905 chr3L 21776679 21776701 chr3L 21776766 21776788 7 87 0.5 2.0 1.2 3.2 109 chr3L 21776679 intron,intron CG42689 +,CG42552 + chr3L 21776734 intron,intron CG42689 +,CG42552 + chr3L 21776788 intron,intron CG42689 +,CG42552 + chr3L_7_21775001 chr3L_21775001 RAL-367 906 chr3L 21852256 21852283 chr3L 21852349 21852376 9 91 2.0 3.5 2.8 2.4 120 chr3L 21852256 intron mub + chr3L 21852316 intron mub + chr3L 21852376 intron mub + chr3L_9_21850001 chr3L_21850001 RAL-367 907 chr3L 21970805 21970840 chr3L 21970896 21970931 13 89 1.5 2.5 2.0 4.3 126 chr3L 21970805 intergenic not near genes chr3L 21970868 intergenic not near genes chr3L 21970931 intergenic not near genes chr3L_13_21970001 chr3L_21970001 RAL-367 908 chr3L 22016369 22016396 chr3L 22016484 22016512 4 116 5.5 6.5 6.0 0.6 143 chr3L 22016369 intergenic not near genes chr3L 22016440 intergenic not near genes chr3L 22016512 intergenic not near genes chr3L_4_22015001 chr3L_22015001 RAL-367 909 chr3L 22023219 22023249 chr3L 22023311 22023341 12 91 2.5 4.5 3.5 2.7 122 chr3L 22023219 intergenic not near genes chr3L 22023280 intergenic not near genes chr3L 22023341 intergenic not near genes chr3L_12_22020001 chr3L_22020001 RAL-367 910 chr3L 22099673 22099687 chr3L 22105859 22105871 3S18 4 6185 3.0 1.5 2.2 1.2 6198 chr3L 22099673 intergenic not near genes chr3L 22102772 intergenic not near genes chr3L 22105871 intergenic not near genes chr3L_4_22100001 chr3L_22100001 RAL-367 911 chr3L 22166450 22166472 chr3L 22166528 22166550 10 78 6.0 7.5 6.8 1.3 100 chr3L 22166450 intron olf413 + chr3L 22166500 intron olf413 + chr3L 22166550 intron olf413 + chr3L_10_22165001 chr3L_22165001 RAL-367 912 chr3L 22242060 22242091 chr3L 22242162 22242193 5 102 8.0 7.0 7.5 0.6 133 chr3L 22242060 intron olf413 + chr3L 22242126 intron olf413 + chr3L 22242193 intron olf413 + chr3L_5_22240001 chr3L_22240001 RAL-367 913 chr3L 22447198 22447228 chr3L 22447289 22447319 6 91 3.0 2.0 2.5 1.7 121 chr3L 22447198 intergenic not near genes chr3L 22447258 intergenic not near genes chr3L 22447319 intergenic not near genes chr3L_6_22445001 chr3L_22445001 RAL-367 914 chr3L 22555772 22555802 chr3L 22563242 22563272 blood 7 7469 0.5 3.0 1.8 2.5 7500 chr3L 22555772 intergenic not near genes chr3L 22559522 intergenic not near genes chr3L 22563272 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-367 915 chr3L 22570425 22570455 chr3L 22570569 22570599 10 144 1.5 3.5 2.5 2.9 174 chr3L 22570425 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570599 intergenic not near genes chr3L_10_22570001 chr3L_22570001 RAL-367 916 chr3L 22577617 22577644 chr3L 22582405 22582412 Doc 4 4782 2.0 4.5 3.2 1.0 4795 chr3L 22577617 intergenic not near genes chr3L 22580014 intergenic not near genes chr3L 22582412 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-367 917 chr3L 22617191 22617211 chr3L 22624643 22624654 blood 7 7451 1.0 3.5 2.2 2.2 7463 chr3L 22617191 intron CG14459 - chr3L 22620922 intron CG14459 - chr3L 22624654 intron CG14459 - chr3L_7_22620001 chr3L_22620001 RAL-367 918 chr3L 22630758 22630771 chr3L 22630837 22630850 6 79 7.5 6.0 6.8 0.8 92 chr3L 22630758 intron CG14459 - chr3L 22630804 intron CG14459 - chr3L 22630850 intron CG14459 - chr3L_6_22630001 chr3L_22630001 RAL-367 919 chr3L 22652323 22652347 chr3L 22652461 22652485 4 137 7.0 7.5 7.2 0.5 162 chr3L 22652323 exon CG33772 - chr3L 22652404 intron CG33772 - chr3L 22652485 exon CG33772 - chr3L_4_22650001 chr3L_22650001 RAL-367 920 chr3L 22761383 22761412 chr3L 22766817 22766846 Ivk 5 5434 1.0 0.5 0.8 2.8 5463 chr3L 22761383 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766846 intron SPoCk + chr3L_5_22760001 chr3L_22760001 RAL-367 921 chr3L 22853477 22853724 chr3L 22853564 22853810 11 85 0.5 9.0 4.8 1.9 333 chr3L 22853477 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853644 5` UTR CR43426 + chr3L 22853810 5` UTR CR43426 + chr3L_11_22850001 chr3L_22850001 RAL-367 922 chr3L 22865987 22866007 chr3L 22867120 22867140 Doc 4 1133 3.0 1.0 2.0 1.3 1153 chr3L 22865987 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867140 intron CG33170 + chr3L_4_22865001 chr3L_22865001 RAL-367 923 chr3L 22897197 22897218 chr3L 22897280 22897301 7 82 4.0 3.5 3.8 1.5 104 chr3L 22897197 intergenic not near genes chr3L 22897249 intergenic not near genes chr3L 22897301 intergenic not near genes chr3L_7_22895001 chr3L_22895001 RAL-367 924 chr3L 22980582 22980594 chr3L 22980660 22980679 9 83 2.5 1.0 1.8 3.2 97 chr3L 22980582 intergenic not near genes chr3L 22980630 intergenic not near genes chr3L 22980679 intergenic not near genes chr3L_9_22980001 chr3L_22980001 RAL-367 925 chr3L 22989860 22989895 chr3L 22996834 22996869 297 7 6974 1.5 1.0 1.2 3.2 7009 chr3L 22989860 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996869 intergenic not near genes chr3L_7_22990001 chr3L_22990001 RAL-367 926 chr3L 23042224 23042254 chr3L 23048977 23049004 gypsy6 5 6751 5.0 6.0 5.5 0.8 6780 chr3L 23042224 intergenic not near genes chr3L 23045614 intergenic not near genes chr3L 23049004 intergenic not near genes chr3L_5_23045001 chr3L_23045001 RAL-367 927 chr3L 23182262 23182287 chr3L 23182375 23182401 10 113 1.0 4.0 2.5 2.9 139 chr3L 23182262 intron CG34031 + chr3L 23182332 intron CG34031 + chr3L 23182401 intron CG34031 + chr3L_10_23180001 chr3L_23180001 RAL-367 928 chr3L 23875525 23875556 chr3L 23875606 23875607 4 69 7.0 7.0 7.0 0.5 82 chr3L 23875525 intron CG40470 - chr3L 23875566 intron CG40470 - chr3L 23875607 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-367 929 chr3L 25464085 25464099 chr3L 25464183 25464197 5 98 9.5 11.0 10.2 0.4 112 chr3L 25464085 intergenic not near genes chr3L 25464141 intergenic not near genes chr3L 25464197 intergenic not near genes chr3L_5_25460001 chr3L_25460001 RAL-367 930 chr3L 26694925 26694954 chr3L 26695005 26695010 6 76 6.5 5.5 6.0 0.9 85 chr3L 26694925 intergenic not near genes chr3L 26694968 intergenic not near genes chr3L 26695010 intergenic not near genes chr3L_6_26690001 chr3L_26690001 RAL-367 931 chr3L 27347484 27347495 chr3L 27347570 27347581 4 86 1.0 1.0 1.0 2.0 97 chr3L 27347484 intron Dbp80 + chr3L 27347532 intron Dbp80 + chr3L 27347581 intron Dbp80 + chr3L_4_27345001 chr3L_27345001 RAL-367 932 chr3R 3578389 3578403 chr3R 3578469 3578483 4 80 6.0 9.5 7.8 0.5 94 chr3R 3578389 intron Parp - chr3R 3578436 intron Parp - chr3R 3578483 intron Parp - chr3R_4_3575001 chr3R_3575001 RAL-367 933 chr3R 4012498 4012534 chr3R 4012587 4012623 7 87 6.0 5.0 5.5 1.1 125 chr3R 4012498 intergenic not near genes chr3R 4012560 intergenic not near genes chr3R 4012623 intergenic not near genes chr3R_7_4010001 chr3R_4010001 RAL-367 934 chr3R 4063810 4063830 chr3R 4069090 4069109 5 5277 11.0 10.5 10.8 0.4 5299 chr3R 4063810 intergenic not near genes chr3R 4066460 intergenic not near genes chr3R 4069109 intergenic not near genes chr3R_5_4065001 chr3R_4065001 RAL-367 935 chr3R 4105050 4105059 chr3R 4110254 4110263 copia 4 5204 2.0 1.5 1.8 1.4 5213 chr3R 4105050 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110263 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-367 936 chr3R 4408405 4408442 chr3R 4412709 4412746 Juan 7 4304 2.0 1.5 1.8 2.5 4341 chr3R 4408405 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412746 intron CG32944 - chr3R_7_4410001 chr3R_4410001 RAL-367 937 chr3R 4609548 4609563 chr3R 4610712 4610727 1360 7 1164 5.5 5.0 5.2 1.1 1179 chr3R 4609548 intergenic not near genes chr3R 4610138 intergenic not near genes chr3R 4610727 intergenic not near genes chr3R_7_4610001 chr3R_4610001 RAL-367 938 chr3R 4722342 4722374 chr3R 4722479 4722511 4 134 0.5 2.0 1.2 1.8 169 chr3R 4722342 intron Nep2 - chr3R 4722426 intron Nep2 - chr3R 4722511 intron Nep2 - chr3R_4_4720001 chr3R_4720001 RAL-367 939 chr3R 4739116 4739144 chr3R 4739193 4739221 7 77 2.0 3.0 2.5 2.0 105 chr3R 4739116 intron tacc - chr3R 4739168 intron tacc - chr3R 4739221 intron tacc - chr3R_7_4735001 chr3R_4735001 RAL-367 940 chr3R 4769159 4769188 chr3R 4769237 4769266 9 78 5.0 1.5 3.2 2.1 107 chr3R 4769159 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769266 intron,intron atms +,CG44098 - chr3R_9_4765001 chr3R_4765001 RAL-367 941 chr3R 4887485 4887503 chr3R 4894862 4894879 rover 5 7377 4.5 6.0 5.2 0.8 7394 chr3R 4887485 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894879 intergenic not near genes chr3R_5_4890001 chr3R_4890001 RAL-367 942 chr3R 4904879 4904884 chr3R 18214684 18214689 5 13309805 9.5 6.5 8.0 0.6 13309810 chr3R 4904879 intergenic not near genes chr3R 11559784 3` UTR CG10898 + chr3R 18214689 3` UTR CG7985 + chr3R_5_11555001 chr3R_11555001 RAL-367 943 chr3R 4966010 4966036 chr3R 4966097 4966128 4 91 1.5 0.5 1.0 2.0 118 chr3R 4966010 intron CG1124 + chr3R 4966069 intron CG1124 + chr3R 4966128 intron CG1124 + chr3R_4_4965001 chr3R_4965001 RAL-367 944 chr3R 5067987 5068014 chr3R 5073504 5073531 mdg3 4 5517 1.0 2.5 1.8 1.4 5544 chr3R 5067987 intergenic not near genes chr3R 5070759 intergenic not near genes chr3R 5073531 intergenic not near genes chr3R_4_5070001 chr3R_5070001 RAL-367 945 chr3R 5198975 5198998 chr3R 5199059 5199082 4 84 8.5 9.0 8.8 0.4 107 chr3R 5198975 intron cno - chr3R 5199028 intron cno - chr3R 5199082 intron cno - chr3R_4_5195001 chr3R_5195001 RAL-367 946 chr3R 5278089 5278121 chr3R 5278170 5278181 8 78 4.0 3.0 3.5 1.8 92 chr3R 5278089 intron mtd - chr3R 5278135 intron mtd - chr3R 5278181 intron mtd - chr3R_8_5275001 chr3R_5275001 RAL-367 947 chr3R 5437962 5437985 chr3R 5438072 5438095 5 110 2.0 2.0 2.0 1.7 133 chr3R 5437962 intron CG14669 + chr3R 5438028 intron CG14669 + chr3R 5438095 intron CG14669 + chr3R_5_5435001 chr3R_5435001 RAL-367 948 chr3R 5497051 5497075 chr3R 5497920 5497944 9 870 17.5 18.5 18.0 0.5 893 chr3R 5497051 intron CG31547 - chr3R 5497498 intron CG31547 - chr3R 5497944 intron CG31547 - chr3R_9_5495001 chr3R_5495001 RAL-367 949 chr3R 5515145 5515162 chr3R 5515215 5515239 7 76 4.0 3.5 3.8 1.5 94 chr3R 5515145 intron Nmdar1 - chr3R 5515192 intron Nmdar1 - chr3R 5515239 intron Nmdar1 - chr3R_7_5515001 chr3R_5515001 RAL-367 950 chr3R 5746024 5746042 chr3R 5746264 5746283 pogo 4 241 3.0 4.5 3.8 0.8 259 chr3R 5746024 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746283 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-367 951 chr3R 5772375 5772409 chr3R 5772533 5772556 8 154 2.0 1.0 1.5 3.2 181 chr3R 5772375 intron CG2082 - chr3R 5772466 intron CG2082 - chr3R 5772556 intron CG2082 - chr3R_8_5770001 chr3R_5770001 RAL-367 952 chr3R 5809112 5809136 chr3R 5809353 5809377 pogo 8 241 4.0 1.5 2.8 2.1 265 chr3R 5809112 3` UTR CG11000 + chr3R 5809244 3` UTR CG11000 + chr3R 5809377 3` UTR CG11000 + chr3R_8_5805001 chr3R_5805001 RAL-367 953 chr3R 5822382 5822413 chr3R 5823549 5823580 1360 4 1165 3.5 4.0 3.8 0.8 1198 chr3R 5822382 3` UTR CG2023 - chr3R 5822981 3` UTR CG2023 - chr3R 5823580 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-367 954 chr3R 5840822 5840852 chr3R 5840910 5840941 8 89 5.0 6.5 5.8 1.2 119 chr3R 5840822 intergenic CG1213 + chr3R 5840882 intergenic CG1213 + chr3R 5840941 intergenic CG1213 + chr3R_8_5840001 chr3R_5840001 RAL-367 955 chr3R 5896974 5896993 chr3R 5897332 5897352 5 356 6.0 3.5 4.8 0.9 378 chr3R 5896974 intron CG34113 - chr3R 5897163 intron CG34113 - chr3R 5897352 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-367 956 chr3R 6003315 6003347 chr3R 6003398 6003432 9 86 0.5 1.5 1.0 4.5 117 chr3R 6003315 intron Rm62 - chr3R 6003374 intron Rm62 - chr3R 6003432 intron Rm62 - chr3R_9_6000001 chr3R_6000001 RAL-367 957 chr3R 6015963 6015995 chr3R 6024444 6024476 Tirant 11 8478 1.0 1.5 1.2 5.0 8513 chr3R 6015963 intergenic not near genes chr3R 6020220 intergenic not near genes chr3R 6024476 intergenic not near genes chr3R_11_6020001 chr3R_6020001 RAL-367 958 chr3R 6048460 6048470 chr3R 6048538 6048553 6 82 14.5 13.0 13.8 0.4 93 chr3R 6048460 intergenic not near genes chr3R 6048506 intergenic not near genes chr3R 6048553 intergenic not near genes chr3R_6_6045001 chr3R_6045001 RAL-367 959 chr3R 6117411 6117444 chr3R 6117532 6117544 14 117 4.0 2.0 3.0 3.5 133 chr3R 6117411 intergenic not near genes chr3R 6117478 intergenic not near genes chr3R 6117544 intergenic not near genes chr3R_14_6115001 chr3R_6115001 RAL-367 960 chr3R 6158518 6158530 chr3R 6167101 6167105 Tirant 4 8581 5.0 3.5 4.2 0.8 8587 chr3R 6158518 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167105 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-367 961 chr3R 6343705 6343726 chr3R 6343808 6343829 5 103 3.0 2.5 2.8 1.3 124 chr3R 6343705 3` UTR CG10298 + chr3R 6343767 3` UTR CG10298 + chr3R 6343829 intergenic CG10298 +,CG17919 + chr3R_5_6340001 chr3R_6340001 RAL-367 962 chr3R 6551108 6551141 chr3R 6551202 6551235 9 94 5.5 5.0 5.2 1.5 127 chr3R 6551108 intron dpr11 - chr3R 6551172 intron dpr11 - chr3R 6551235 intron dpr11 - chr3R_9_6550001 chr3R_6550001 RAL-367 963 chr3R 6567717 6567735 chr3R 6572050 6572059 4 4326 21.5 18.0 19.8 0.2 4342 chr3R 6567717 intron dpr11 - chr3R 6569888 intron dpr11 - chr3R 6572059 intron dpr11 - chr3R_4_6565001 chr3R_6565001 RAL-367 964 chr3R 6737501 6737531 chr3R 6739286 6739318 Doc 4 1783 1.0 3.5 2.2 1.2 1817 chr3R 6737501 intron pb - chr3R 6738410 intron pb - chr3R 6739318 intron pb - chr3R_4_6735001 chr3R_6735001 RAL-367 965 chr3R 6828028 6828035 chr3R 6828104 6828111 4 76 5.0 4.5 4.8 0.7 83 chr3R 6828028 intron Scr - chr3R 6828070 intron Scr - chr3R 6828111 intron Scr - chr3R_4_6825001 chr3R_6825001 RAL-367 966 chr3R 6923586 6923616 chr3R 6923673 6923702 5 86 2.0 3.5 2.8 1.3 116 chr3R 6923586 intron Antp - chr3R 6923644 intron Antp - chr3R 6923702 intron Antp - chr3R_5_6920001 chr3R_6920001 RAL-367 967 chr3R 6961181 6961204 chr3R 6961260 6961283 4 79 2.0 1.5 1.8 1.4 102 chr3R 6961181 intron Antp - chr3R 6961232 intron Antp - chr3R 6961283 intron Antp - chr3R_4_6960001 chr3R_6960001 RAL-367 968 chr3R 7012203 7012231 chr3R 7012281 7012309 5 78 8.0 4.0 6.0 0.7 106 chr3R 7012203 intergenic not near genes chr3R 7012256 intergenic not near genes chr3R 7012309 intergenic not near genes chr3R_5_7010001 chr3R_7010001 RAL-367 969 chr3R 7103939 7103951 chr3R 7104038 7104050 4 99 2.0 2.0 2.0 1.3 111 chr3R 7103939 intron Alh - chr3R 7103994 intron Alh - chr3R 7104050 intron Alh - chr3R_4_7100001 chr3R_7100001 RAL-367 970 chr3R 7163118 7163135 chr3R 7163199 7163216 4 81 11.0 9.5 10.2 0.4 98 chr3R 7163118 intron sas + chr3R 7163167 intron sas + chr3R 7163216 intron sas + chr3R_4_7160001 chr3R_7160001 RAL-367 971 chr3R 7202666 7202693 chr3R 7202744 7202771 5 78 5.5 4.0 4.8 0.9 105 chr3R 7202666 exon CG14609 + chr3R 7202718 intron CG14609 + chr3R 7202771 intron CG14609 + chr3R_5_7200001 chr3R_7200001 RAL-367 972 chr3R 7342722 7342753 chr3R 7342798 7342829 5 76 6.5 6.5 6.5 0.7 107 chr3R 7342722 intergenic not near genes chr3R 7342776 intergenic not near genes chr3R 7342829 intergenic not near genes chr3R_5_7340001 chr3R_7340001 RAL-367 973 chr3R 7356221 7356246 chr3R 7356314 7356339 7 93 2.5 5.0 3.8 1.5 118 chr3R 7356221 intergenic not near genes chr3R 7356280 intergenic not near genes chr3R 7356339 intergenic not near genes chr3R_7_7355001 chr3R_7355001 RAL-367 974 chr3R 7438910 7438941 chr3R 7438988 7439019 8 74 6.5 9.5 8.0 0.9 109 chr3R 7438910 intergenic not near genes chr3R 7438964 intergenic not near genes chr3R 7439019 intergenic not near genes chr3R_8_7435001 chr3R_7435001 RAL-367 975 chr3R 7448002 7448012 chr3R 7448080 7448089 4 78 3.0 3.0 3.0 1.0 87 chr3R 7448002 intergenic not near genes chr3R 7448046 intergenic not near genes chr3R 7448089 intergenic not near genes chr3R_4_7445001 chr3R_7445001 RAL-367 976 chr3R 7509557 7509588 chr3R 7509669 7509700 5 112 4.0 4.5 4.2 1.0 143 chr3R 7509557 3` UTR alpha-Est8 - chr3R 7509628 3` UTR alpha-Est8 - chr3R 7509700 3` UTR alpha-Est8 - chr3R_5_7505001 chr3R_7505001 RAL-367 977 chr3R 7527458 7527481 chr3R 7527546 7527569 4 88 7.5 7.5 7.5 0.5 111 chr3R 7527458 intron alpha-Est6 - chr3R 7527514 intron alpha-Est6 - chr3R 7527569 intron alpha-Est6 - chr3R_4_7525001 chr3R_7525001 RAL-367 978 chr3R 7633273 7633306 chr3R 7633355 7633388 7 80 3.0 2.0 2.5 2.0 115 chr3R 7633273 intron CG34127 - chr3R 7633330 intron CG34127 - chr3R 7633388 intron CG34127 - chr3R_7_7630001 chr3R_7630001 RAL-367 979 chr3R 7655009 7655038 chr3R 7655086 7655120 4 80 5.5 7.5 6.5 0.5 111 chr3R 7655009 intergenic not near genes chr3R 7655064 intergenic not near genes chr3R 7655120 intergenic not near genes chr3R_4_7655001 chr3R_7655001 RAL-367 980 chr3R 7677913 7677946 chr3R 7678026 7678059 9 112 1.0 1.5 1.2 4.1 146 chr3R 7677913 intron Nlg1 + chr3R 7677986 intron Nlg1 + chr3R 7678059 intron Nlg1 + chr3R_9_7675001 chr3R_7675001 RAL-367 981 chr3R 7729477 7729495 chr3R 7737415 7737433 Stalker2 5 7938 1.5 3.5 2.5 1.4 7956 chr3R 7729477 intergenic not near genes chr3R 7733455 intergenic not near genes chr3R 7737433 intergenic not near genes chr3R_5_7730001 chr3R_7730001 RAL-367 982 chr3R 7739912 7739935 chr3R 7739993 7740000 6 77 2.0 2.5 2.2 1.9 88 chr3R 7739912 intergenic CR44935 +,CG43254 - chr3R 7739956 intergenic CR44935 +,CG43254 - chr3R 7740000 intergenic CR44935 +,CG43254 - chr3R_6_7735001 chr3R_7735001 RAL-367 983 chr3R 7830300 7830327 chr3R 7830450 7830478 4 151 6.0 6.5 6.2 0.6 178 chr3R 7830300 intron CG34384 + chr3R 7830389 intron CG34384 + chr3R 7830478 intron CG34384 + chr3R_4_7830001 chr3R_7830001 RAL-367 984 chr3R 7849642 7849675 chr3R 7850809 7850842 1360 6 1167 2.0 4.5 3.2 1.4 1200 chr3R 7849642 intron CG34384 + chr3R 7850242 intron CG34384 + chr3R 7850842 intron CG34384 + chr3R_6_7850001 chr3R_7850001 RAL-367 985 chr3R 8049050 8049062 chr3R 8049624 8049636 4 574 13.0 6.5 9.8 0.4 586 chr3R 8049050 intron CG43060 + chr3R 8049343 intron,intron CG43060 +,CG43618 + chr3R 8049636 intron CG43060 + chr3R_4_8045001 chr3R_8045001 RAL-367 986 chr3R 8090283 8090294 chr3R 8090460 8090471 9 177 3.5 3.0 3.2 2.1 188 chr3R 8090283 5` UTR CR44330 + chr3R 8090377 intergenic CR44330 + chr3R 8090471 intergenic CR44330 + chr3R_9_8090001 chr3R_8090001 RAL-367 987 chr3R 8094407 8094441 chr3R 8099712 8099746 Transpac 6 5305 1.5 2.0 1.8 2.1 5339 chr3R 8094407 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099746 intron CG7900 + chr3R_6_8095001 chr3R_8095001 RAL-367 988 chr3R 8207553 8207585 chr3R 8208398 8208430 F-element 8 844 2.0 4.0 3.0 2.0 877 chr3R 8207553 intergenic not near genes chr3R 8207992 intergenic not near genes chr3R 8208430 intergenic not near genes chr3R_8_8205001 chr3R_8205001 RAL-367 989 chr3R 8339246 8339247 chr3R 21907534 21907536 9 13568289 5.5 18.5 12.0 0.7 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-367 990 chr3R 8403010 8403036 chr3R 8412176 8412202 roo 7 9166 3.5 3.5 3.5 1.6 9192 chr3R 8403010 intron CG45263 - chr3R 8407606 intron CG45263 - chr3R 8412202 intron CG45263 - chr3R_7_8405001 chr3R_8405001 RAL-367 991 chr3R 8541338 8541361 chr3R 8541419 8541442 5 81 10.5 13.5 12.0 0.4 104 chr3R 8541338 intergenic not near genes chr3R 8541390 intergenic not near genes chr3R 8541442 intergenic not near genes chr3R_5_8540001 chr3R_8540001 RAL-367 992 chr3R 8570478 8570511 chr3R 8575114 8575136 HMS-Beagle 20 4634 1.5 3.5 2.5 5.7 4658 chr3R 8570478 intergenic not near genes chr3R 8572807 intergenic not near genes chr3R 8575136 intergenic not near genes chr3R_20_8570001 chr3R_8570001 RAL-367 993 chr3R 8575939 8575949 chr3R 8576017 8576027 4 80 10.0 11.5 10.8 0.3 88 chr3R 8575939 intergenic not near genes chr3R 8575983 intergenic not near genes chr3R 8576027 intergenic not near genes chr3R_4_8575001 chr3R_8575001 RAL-367 994 chr3R 8601767 8601799 chr3R 8610920 8610952 roo 13 9152 2.0 1.0 1.5 5.2 9185 chr3R 8601767 intron 5-HT2B + chr3R 8606360 intron 5-HT2B + chr3R 8610952 intron 5-HT2B + chr3R_13_8605001 chr3R_8605001 RAL-367 995 chr3R 8614792 8614804 chr3R 8614994 8615007 5 202 7.0 12.5 9.8 0.5 215 chr3R 8614792 intron 5-HT2B + chr3R 8614900 intron 5-HT2B + chr3R 8615007 intron 5-HT2B + chr3R_5_8610001 chr3R_8610001 RAL-367 996 chr3R 8707355 8707382 chr3R 8709796 8709823 jockey 12 2441 4.5 3.0 3.8 2.5 2468 chr3R 8707355 intergenic not near genes chr3R 8708589 intergenic not near genes chr3R 8709823 intergenic not near genes chr3R_12_8705001 chr3R_8705001 RAL-367 997 chr3R 8809068 8809102 chr3R 8809160 8809194 14 90 2.5 4.0 3.2 3.3 126 chr3R 8809068 3` UTR CG9837 - chr3R 8809131 exon CG9837 - chr3R 8809194 exon CG9837 - chr3R_14_8805001 chr3R_8805001 RAL-367 998 chr3R 8917892 8917912 chr3R 8917972 8917984 5 78 2.0 1.5 1.8 1.8 92 chr3R 8917892 intron pyd - chr3R 8917938 intron pyd - chr3R 8917984 intron pyd - chr3R_5_8915001 chr3R_8915001 RAL-367 999 chr3R 8940123 8940151 chr3R 8940213 8940241 7 90 3.5 0.5 2.0 2.3 118 chr3R 8940123 intron skap + chr3R 8940182 intron skap + chr3R 8940241 intron skap + chr3R_7_8940001 chr3R_8940001 RAL-367 1000 chr3R 9069509 9069520 chr3R 9069588 9069599 5 79 1.5 5.5 3.5 1.1 90 chr3R 9069509 3` UTR pum - chr3R 9069554 3` UTR pum - chr3R 9069599 3` UTR pum - chr3R_5_9065001 chr3R_9065001 RAL-367 1001 chr3R 9101849 9101869 chr3R 9101947 9101967 5 98 0.0 4.5 2.2 1.6 118 chr3R 9101849 intron pum - chr3R 9101908 intron pum - chr3R 9101967 intron pum - chr3R_5_9100001 chr3R_9100001 RAL-367 1002 chr3R 9107460 9107496 chr3R 9107564 9107598 17 103 3.5 3.0 3.2 4.0 138 chr3R 9107460 intron pum - chr3R 9107529 intron pum - chr3R 9107598 intron pum - chr3R_17_9105001 chr3R_9105001 RAL-367 1003 chr3R 9204250 9204278 chr3R 9204337 9204358 11 86 4.0 2.5 3.2 2.6 108 chr3R 9204250 intron pum - chr3R 9204304 intron pum - chr3R 9204358 intron pum - chr3R_11_9200001 chr3R_9200001 RAL-367 1004 chr3R 9251430 9251458 chr3R 9251510 9251538 4 80 1.0 0.5 0.8 2.2 108 chr3R 9251430 3` UTR CG8420 + chr3R 9251484 intergenic CG8420 +,St2 + chr3R 9251538 intergenic CG8420 +,St2 + chr3R_4_9250001 chr3R_9250001 RAL-367 1005 chr3R 9319577 9319607 chr3R 9320012 9320042 jockey 5 435 2.0 4.5 3.2 1.2 465 chr3R 9319577 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320042 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-367 1006 chr3R 9362978 9363005 chr3R 9363067 9363094 4 89 1.0 0.0 0.5 2.7 116 chr3R 9362978 3` UTR CG45050 + chr3R 9363036 intergenic CG45050 +,CG18473 + chr3R 9363094 intergenic CG45050 +,CG18473 + chr3R_4_9360001 chr3R_9360001 RAL-367 1007 chr3R 9628205 9628229 chr3R 9628412 9628436 7 204 3.0 3.0 3.0 1.8 231 chr3R 9628205 exon CG8319 + chr3R 9628320 exon CG8319 + chr3R 9628436 exon CG8319 + chr3R_7_9625001 chr3R_9625001 RAL-367 1008 chr3R 9647505 9647531 chr3R 9647751 9647777 8 244 3.5 4.0 3.8 1.7 272 chr3R 9647505 intron Dh44 + chr3R 9647641 intron Dh44 + chr3R 9647777 intron Dh44 + chr3R_8_9645001 chr3R_9645001 RAL-367 1009 chr3R 9702260 9702290 chr3R 9702336 9702361 6 74 2.0 2.5 2.2 1.9 101 chr3R 9702260 intron Unc-115a - chr3R 9702310 intron Unc-115a - chr3R 9702361 intron Unc-115a - chr3R_6_9700001 chr3R_9700001 RAL-367 1010 chr3R 9877206 9877225 chr3R 9877282 9877300 5 76 2.0 4.0 3.0 1.2 94 chr3R 9877206 intron,intron Glut4EF +,CR45029 - chr3R 9877253 intron,intron Glut4EF +,CR45029 - chr3R 9877300 intron,intron Glut4EF +,CR45029 - chr3R_5_9875001 chr3R_9875001 RAL-367 1011 chr3R 9884716 9884747 chr3R 9884806 9884836 5 89 4.0 3.0 3.5 1.1 120 chr3R 9884716 intron Glut4EF + chr3R 9884776 intron Glut4EF + chr3R 9884836 intron Glut4EF + chr3R_5_9880001 chr3R_9880001 RAL-367 1012 chr3R 10073776 10073803 chr3R 10073885 10073912 5 109 1.0 3.0 2.0 1.7 136 chr3R 10073776 intergenic nerfin-2 +,CG5361 - chr3R 10073844 3` UTR CG5361 - chr3R 10073912 exon CG5361 - chr3R_5_10070001 chr3R_10070001 RAL-367 1013 chr3R 10275558 10275583 chr3R 10275635 10275660 7 77 0.0 2.5 1.2 3.2 102 chr3R 10275558 intron CG43143 + chr3R 10275609 intron CG43143 + chr3R 10275660 intron CG43143 + chr3R_7_10275001 chr3R_10275001 RAL-367 1014 chr3R 10430680 10430708 chr3R 10430769 10430797 10 89 2.0 4.0 3.0 2.5 117 chr3R 10430680 intergenic not near genes chr3R 10430738 intergenic not near genes chr3R 10430797 intergenic not near genes chr3R_10_10430001 chr3R_10430001 RAL-367 1015 chr3R 10474757 10474785 chr3R 10474860 10474888 12 99 1.5 3.0 2.2 3.8 131 chr3R 10474757 intergenic not near genes chr3R 10474822 intergenic not near genes chr3R 10474888 intergenic not near genes chr3R_12_10470001 chr3R_10470001 RAL-367 1016 chr3R 10646111 10646136 chr3R 10646262 10646287 4 151 2.0 4.0 3.0 1.0 176 chr3R 10646111 intergenic CR44018 + chr3R 10646199 intergenic CR44018 + chr3R 10646287 intergenic not near genes chr3R_4_10645001 chr3R_10645001 RAL-367 1017 chr3R 10723770 10723793 chr3R 10723861 10723885 5 92 1.5 0.5 1.0 2.5 115 chr3R 10723770 intergenic not near genes chr3R 10723828 intergenic not near genes chr3R 10723885 intergenic not near genes chr3R_5_10720001 chr3R_10720001 RAL-367 1018 chr3R 10727652 10727678 chr3R 10727732 10727758 14 80 2.5 7.5 5.0 2.3 106 chr3R 10727652 intergenic not near genes chr3R 10727705 intergenic not near genes chr3R 10727758 intergenic not near genes chr3R_14_10725001 chr3R_10725001 RAL-367 1019 chr3R 10745432 10745455 chr3R 10745519 10745542 9 87 3.0 4.0 3.5 2.0 110 chr3R 10745432 intron TkR86C - chr3R 10745487 intron TkR86C - chr3R 10745542 intron TkR86C - chr3R_9_10745001 chr3R_10745001 RAL-367 1020 chr3R 10868593 10868620 chr3R 10868671 10868693 6 76 3.5 2.0 2.8 1.6 100 chr3R 10868593 5` UTR SelR - chr3R 10868643 intergenic SelR -,Tsp86D + chr3R 10868693 intergenic Tsp86D +,SelR - chr3R_6_10865001 chr3R_10865001 RAL-367 1021 chr3R 10904908 10904936 chr3R 10905112 10905140 7 202 4.0 0.0 2.0 2.3 232 chr3R 10904908 intergenic not near genes chr3R 10905024 intergenic not near genes chr3R 10905140 intergenic not near genes chr3R_7_10905001 chr3R_10905001 RAL-367 1022 chr3R 10906836 10906850 chr3R 10906912 10906926 8 76 0.5 2.5 1.5 3.2 90 chr3R 10906836 intergenic not near genes chr3R 10906881 intergenic not near genes chr3R 10906926 intergenic not near genes chr3R_8_10905001 chr3R_10905001 RAL-367 1023 chr3R 10919693 10919716 chr3R 10919771 10919794 4 78 3.0 2.0 2.5 1.1 101 chr3R 10919693 intergenic not near genes chr3R 10919744 intergenic not near genes chr3R 10919794 intergenic not near genes chr3R_4_10915001 chr3R_10915001 RAL-367 1024 chr3R 10920046 10920075 chr3R 10920123 10920153 6 78 2.0 2.0 2.0 2.0 107 chr3R 10920046 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920153 intergenic not near genes chr3R_6_10920001 chr3R_10920001 RAL-367 1025 chr3R 10927284 10927294 chr3R 10927612 10927622 7 328 4.0 2.5 3.2 1.7 338 chr3R 10927284 intergenic not near genes chr3R 10927453 intergenic not near genes chr3R 10927622 intergenic not near genes chr3R_7_10925001 chr3R_10925001 RAL-367 1026 chr3R 11175350 11175371 chr3R 11175445 11175466 5 94 10.5 9.0 9.8 0.5 116 chr3R 11175350 exon Ugt86Dj - chr3R 11175408 5` UTR Ugt86Dj - chr3R 11175466 intergenic Ugt86Dj -,Ugt86Dh + chr3R_5_11175001 chr3R_11175001 RAL-367 1027 chr3R 11198007 11198017 chr3R 11198106 11198116 4 98 1.0 7.0 4.0 0.8 109 chr3R 11198007 intron cu + chr3R 11198062 intron cu + chr3R 11198116 intron cu + chr3R_4_11195001 chr3R_11195001 RAL-367 1028 chr3R 11263510 11263521 chr3R 11263587 11263604 4 82 3.5 1.5 2.5 1.1 94 chr3R 11263510 intergenic not near genes chr3R 11263557 intergenic not near genes chr3R 11263604 intergenic not near genes chr3R_4_11260001 chr3R_11260001 RAL-367 1029 chr3R 11342541 11342574 chr3R 11342617 11342650 7 76 1.0 0.0 0.5 4.7 109 chr3R 11342541 intron pros + chr3R 11342596 intron pros + chr3R 11342650 intron pros + chr3R_7_11340001 chr3R_11340001 RAL-367 1030 chr3R 11404942 11404960 chr3R 11405022 11405040 9 79 3.5 1.0 2.2 2.8 98 chr3R 11404942 3` UTR pros + chr3R 11404991 3` UTR pros + chr3R 11405040 3` UTR pros + chr3R_9_11400001 chr3R_11400001 RAL-367 1031 chr3R 11408754 11408784 chr3R 11408848 11408878 7 91 2.0 1.5 1.8 2.5 124 chr3R 11408754 3` UTR mRpL40 + chr3R 11408816 3` UTR mgr - chr3R 11408878 3` UTR mgr - chr3R_7_11405001 chr3R_11405001 RAL-367 1032 chr3R 11461280 11461300 chr3R 11461350 11461380 7 76 1.0 4.0 2.5 2.0 100 chr3R 11461280 intron CG17230 + chr3R 11461330 intron CG17230 + chr3R 11461380 intron CG17230 + chr3R_7_11460001 chr3R_11460001 RAL-367 1033 chr3R 11527536 11527566 chr3R 11527618 11527629 9 80 3.5 5.5 4.5 1.6 93 chr3R 11527536 intergenic not near genes chr3R 11527582 intergenic not near genes chr3R 11527629 intergenic not near genes chr3R_9_11525001 chr3R_11525001 RAL-367 1034 chr3R 11571832 11571852 chr3R 11571928 11571948 9 96 1.5 1.0 1.2 4.1 116 chr3R 11571832 intron Mrp4 + chr3R 11571890 intron Mrp4 + chr3R 11571948 intron Mrp4 + chr3R_9_11570001 chr3R_11570001 RAL-367 1035 chr3R 11602771 11602797 chr3R 11602943 11602969 5 172 1.5 0.5 1.0 2.5 198 chr3R 11602771 intron Jupiter - chr3R 11602870 intron Jupiter - chr3R 11602969 intron Jupiter - chr3R_5_11600001 chr3R_11600001 RAL-367 1036 chr3R 11634338 11634355 chr3R 11634423 11634440 6 85 2.0 2.5 2.2 1.9 102 chr3R 11634338 3` UTR Csk - chr3R 11634389 3` UTR Csk - chr3R 11634440 3` UTR Csk - chr3R_6_11630001 chr3R_11630001 RAL-367 1037 chr3R 11722219 11722368 chr3R 11722299 11722462 9 90 2.0 2.0 2.0 3.0 243 chr3R 11722219 5` UTR CG12594 + chr3R 11722340 5` UTR CG12594 + chr3R 11722462 intron CG12594 + chr3R_9_11720001 chr3R_11720001 RAL-367 1038 chr3R 11733832 11733857 chr3R 11733934 11733959 7 101 2.5 2.5 2.5 2.0 127 chr3R 11733832 intergenic not near genes chr3R 11733896 intergenic not near genes chr3R 11733959 intergenic not near genes chr3R_7_11730001 chr3R_11730001 RAL-367 1039 chr3R 11774966 11774997 chr3R 11775078 11775109 7 112 1.0 2.0 1.5 2.8 143 chr3R 11774966 intron l(3)neo38 - chr3R 11775038 intron l(3)neo38 - chr3R 11775109 intron l(3)neo38 - chr3R_7_11775001 chr3R_11775001 RAL-367 1040 chr3R 11813652 11813666 chr3R 11813736 11813750 4 84 2.5 1.0 1.8 1.4 98 chr3R 11813652 intergenic ClC-a - chr3R 11813701 intergenic ClC-a - chr3R 11813750 intergenic not near genes chr3R_4_11810001 chr3R_11810001 RAL-367 1041 chr3R 11825268 11825283 chr3R 11825342 11825364 5 80 2.5 0.5 1.5 2.0 96 chr3R 11825268 intron CG6959 - chr3R 11825316 intron CG6959 - chr3R 11825364 intron CG6959 - chr3R_5_11825001 chr3R_11825001 RAL-367 1042 chr3R 11858738 11858754 chr3R 11858948 11858964 4 210 0.5 2.5 1.5 1.6 226 chr3R 11858738 5` UTR CG6959 - chr3R 11858851 intron CG6959 - chr3R 11858964 intron CG6959 - chr3R_4_11855001 chr3R_11855001 RAL-367 1043 chr3R 11867471 11867493 chr3R 11867643 11867665 10 172 6.0 1.5 3.8 2.1 194 chr3R 11867471 intron CG6959 - chr3R 11867568 intron CG6959 - chr3R 11867665 intron CG6959 - chr3R_10_11865001 chr3R_11865001 RAL-367 1044 chr3R 11909751 11909783 chr3R 11909829 11909863 16 80 3.0 2.0 2.5 4.6 112 chr3R 11909751 intron Cad87A - chr3R 11909807 intron Cad87A - chr3R 11909863 intron Cad87A - chr3R_16_11905001 chr3R_11905001 RAL-367 1045 chr3R 12029941 12029952 chr3R 12030028 12030039 6 86 3.0 4.0 3.5 1.3 98 chr3R 12029941 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029990 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030039 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_6_12025001 chr3R_12025001 RAL-367 1046 chr3R 12088494 12088525 chr3R 12088583 12088614 7 89 1.5 0.5 1.0 3.5 120 chr3R 12088494 intron CG14741 - chr3R 12088554 intron CG14741 - chr3R 12088614 intron CG14741 - chr3R_7_12085001 chr3R_12085001 RAL-367 1047 chr3R 12102874 12102878 chr3R 12102975 12102979 4 101 4.5 4.0 4.2 0.8 105 chr3R 12102874 intron dpr17 + chr3R 12102926 intron dpr17 + chr3R 12102979 intron dpr17 + chr3R_4_12100001 chr3R_12100001 RAL-367 1048 chr3R 12208085 12208117 chr3R 12208164 12208196 5 79 0.5 2.5 1.5 2.0 111 chr3R 12208085 intergenic CG4830 - chr3R 12208140 intergenic CG4830 - chr3R 12208196 3` UTR CG4830 - chr3R_5_12205001 chr3R_12205001 RAL-367 1049 chr3R 12214432 12214450 chr3R 12214506 12214527 8 78 1.0 5.5 3.2 1.9 95 chr3R 12214432 3` UTR CG4848 - chr3R 12214480 3` UTR CG4848 - chr3R 12214527 3` UTR,5` UTR CG4848 -,CG14742 + chr3R_8_12210001 chr3R_12210001 RAL-367 1050 chr3R 12359482 12359500 chr3R 12359621 12359639 4 139 2.5 0.5 1.5 1.6 157 chr3R 12359482 intergenic not near genes chr3R 12359560 intergenic CG4115 + chr3R 12359639 intergenic CG4115 + chr3R_4_12355001 chr3R_12355001 RAL-367 1051 chr3R 12687327 12687353 chr3R 12687403 12687429 7 76 2.0 2.0 2.0 2.3 102 chr3R 12687327 intron kar - chr3R 12687378 intron kar - chr3R 12687429 intron kar - chr3R_7_12685001 chr3R_12685001 RAL-367 1052 chr3R 12717394 12717421 chr3R 12717744 12717771 10 350 3.0 3.5 3.2 2.4 377 chr3R 12717394 intron Men - chr3R 12717582 intron Men - chr3R 12717771 intron Men - chr3R_10_12715001 chr3R_12715001 RAL-367 1053 chr3R 12763130 12763151 chr3R 12763207 12763228 4 77 0.0 0.5 0.2 3.3 98 chr3R 12763130 intron beat-Vc - chr3R 12763179 intron beat-Vc - chr3R 12763228 intron beat-Vc - chr3R_4_12760001 chr3R_12760001 RAL-367 1054 chr3R 12866490 12866513 chr3R 12866641 12866664 5 151 1.5 2.0 1.8 1.8 174 chr3R 12866490 intergenic not near genes chr3R 12866577 intergenic not near genes chr3R 12866664 intergenic not near genes chr3R_5_12865001 chr3R_12865001 RAL-367 1055 chr3R 12920152 12920181 chr3R 12925355 12925384 copia 9 5201 4.0 4.5 4.2 1.7 5232 chr3R 12920152 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925384 intron beat-Vb + chr3R_9_12920001 chr3R_12920001 RAL-367 1056 chr3R 13067114 13067132 chr3R 13067190 13067208 4 76 0.0 1.0 0.5 2.7 94 chr3R 13067114 intron sim + chr3R 13067161 intron sim + chr3R 13067208 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-367 1057 chr3R 13120770 13120799 chr3R 13120847 13120876 7 77 2.5 3.0 2.8 1.8 106 chr3R 13120770 intron timeout + chr3R 13120823 intron timeout + chr3R 13120876 intron timeout + chr3R_7_13120001 chr3R_13120001 RAL-367 1058 chr3R 13143048 13143059 chr3R 13148624 13148635 mdg3 6 5575 1.5 3.0 2.2 1.9 5587 chr3R 13143048 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145842 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148635 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13145001 chr3R_13145001 RAL-367 1059 chr3R 13143061 13143066 chr3R 13148621 13148642 mdg3 4 5568 1.0 2.5 1.8 1.4 5581 chr3R 13143061 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145852 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-367 1060 chr3R 13195952 13195984 chr3R 13196047 13196062 9 92 2.0 1.5 1.8 3.2 110 chr3R 13195952 intergenic not near genes chr3R 13196007 intergenic not near genes chr3R 13196062 intergenic not near genes chr3R_9_13195001 chr3R_13195001 RAL-367 1061 chr3R 7773344 7773344 chr3R 13217322 13217322 4 5443978 10.0 14.0 12.0 0.3 5443978 chr3R 7773344 intergenic not near genes chr3R 10495333 intergenic not near genes chr3R 13217322 intergenic not near genes chr3R_4_10495001 chr3R_10495001 RAL-367 1062 chr3R 13260725 13260748 chr3R 13260856 13260879 5 131 2.0 2.0 2.0 1.7 154 chr3R 13260725 intron CG11686 + chr3R 13260802 intron CG11686 + chr3R 13260879 intron CG11686 + chr3R_5_13260001 chr3R_13260001 RAL-367 1063 chr3R 13274210 13274249 chr3R 13274289 13274328 11 79 3.0 1.0 2.0 3.7 118 chr3R 13274210 intergenic not near genes chr3R 13274269 intergenic not near genes chr3R 13274328 intergenic not near genes chr3R_11_13270001 chr3R_13270001 RAL-367 1064 chr3R 13603057 13603072 chr3R 13603148 13603163 4 91 1.0 1.0 1.0 2.0 106 chr3R 13603057 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603163 intergenic not near genes chr3R_4_13600001 chr3R_13600001 RAL-367 1065 chr3R 13672944 13672976 chr3R 13673022 13673054 4 78 0.5 4.0 2.2 1.2 110 chr3R 13672944 intron Task6 - chr3R 13672999 intron Task6 - chr3R 13673054 intron Task6 - chr3R_4_13670001 chr3R_13670001 RAL-367 1066 chr3R 13693027 13693028 chr3R 21907534 21907536 4 8214507 5.0 18.5 11.8 0.3 8214509 chr3R 13693027 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_4_17800001 chr3R_17800001 RAL-367 1067 chr3R 13763313 13763332 chr3R 13763393 13763412 8 80 2.0 0.5 1.2 3.6 99 chr3R 13763313 3` UTR CG34383 + chr3R 13763362 3` UTR CG34383 + chr3R 13763412 3` UTR CG34383 + chr3R_8_13760001 chr3R_13760001 RAL-367 1068 chr3R 13847498 13847530 chr3R 13847574 13847606 10 74 1.0 1.5 1.2 4.5 108 chr3R 13847498 intergenic not near genes chr3R 13847552 intergenic not near genes chr3R 13847606 intergenic not near genes chr3R_10_13845001 chr3R_13845001 RAL-367 1069 chr3R 13863679 13863715 chr3R 13863767 13863803 8 86 0.5 1.5 1.0 4.0 124 chr3R 13863679 intergenic not near genes chr3R 13863741 intergenic not near genes chr3R 13863803 intergenic not near genes chr3R_8_13860001 chr3R_13860001 RAL-367 1070 chr3R 13975373 13975407 chr3R 13975453 13975487 6 80 1.5 1.0 1.2 2.7 114 chr3R 13975373 intron rdx - chr3R 13975430 intron rdx - chr3R 13975487 intron rdx - chr3R_6_13975001 chr3R_13975001 RAL-367 1071 chr3R 14117436 14117453 chr3R 14117512 14117529 5 76 1.5 1.0 1.2 2.3 93 chr3R 14117436 intron Kif19A - chr3R 14117482 intron Kif19A - chr3R 14117529 intron Kif19A - chr3R_5_14115001 chr3R_14115001 RAL-367 1072 chr3R 14246396 14246417 chr3R 14247892 14247894 jockey 4 1491 4.0 3.5 3.8 0.8 1498 chr3R 14246396 intergenic not near genes chr3R 14247145 intergenic not near genes chr3R 14247894 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-367 1073 chr3R 14548573 14548600 chr3R 14548661 14548688 8 86 2.5 2.5 2.5 2.3 115 chr3R 14548573 intron Pde6 - chr3R 14548630 intron Pde6 - chr3R 14548688 intron Pde6 - chr3R_8_14545001 chr3R_14545001 RAL-367 1074 chr3R 14560912 14560927 chr3R 14560996 14561021 5 92 0.5 3.0 1.8 1.8 109 chr3R 14560912 intergenic CG14850 + chr3R 14560966 5` UTR CG14850 + chr3R 14561021 exon CG14850 + chr3R_5_14560001 chr3R_14560001 RAL-367 1075 chr3R 14577959 14577975 chr3R 14578075 14578091 4 116 1.5 0.0 0.8 2.2 132 chr3R 14577959 intron stumps + chr3R 14578025 intron stumps + chr3R 14578091 intron stumps + chr3R_4_14575001 chr3R_14575001 RAL-367 1076 chr3R 14612507 14612531 chr3R 14612754 14612778 4 247 3.5 0.5 2.0 1.3 271 chr3R 14612507 intron CG14853 + chr3R 14612642 intron CG14853 + chr3R 14612778 intron CG14853 + chr3R_4_14610001 chr3R_14610001 RAL-367 1077 chr3R 14704395 14704418 chr3R 14704472 14704495 6 77 1.0 3.0 2.0 2.0 100 chr3R 14704395 intron kibra - chr3R 14704445 intron kibra - chr3R 14704495 intron kibra - chr3R_6_14700001 chr3R_14700001 RAL-367 1078 chr3R 14709319 14709341 chr3R 14709402 14709424 4 83 3.5 2.0 2.8 1.1 105 chr3R 14709319 intron kibra - chr3R 14709372 intron kibra - chr3R 14709424 intron kibra - chr3R_4_14705001 chr3R_14705001 RAL-367 1079 chr3R 14779075 14779094 chr3R 14779145 14779174 7 77 1.0 3.0 2.0 2.3 99 chr3R 14779075 intron jvl + chr3R 14779124 intron jvl + chr3R 14779174 intron jvl + chr3R_7_14775001 chr3R_14775001 RAL-367 1080 chr3R 14839825 14839846 chr3R 14840681 14840712 7 863 0.5 1.5 1.0 3.5 887 chr3R 14839825 intron btsz - chr3R 14840268 intron btsz - chr3R 14840712 intron btsz - chr3R_7_14840001 chr3R_14840001 RAL-367 1081 chr3R 15026335 15026342 chr3R 15026421 15026428 4 86 0.5 3.0 1.8 1.4 93 chr3R 15026335 intergenic not near genes chr3R 15026382 intergenic not near genes chr3R 15026428 intergenic not near genes chr3R_4_15025001 chr3R_15025001 RAL-367 1082 chr3R 15041424 15041450 chr3R 15045192 15045218 Doc 4 3768 2.0 1.0 1.5 1.6 3794 chr3R 15041424 intergenic not near genes chr3R 15043321 intergenic not near genes chr3R 15045218 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-367 1083 chr3R 15143926 15143956 chr3R 15144109 15144139 4 183 1.0 0.0 0.5 2.7 213 chr3R 15143926 intron GlyS - chr3R 15144032 intron GlyS - chr3R 15144139 intron GlyS - chr3R_4_15140001 chr3R_15140001 RAL-367 1084 chr3R 15601173 15601194 chr3R 15608695 15608716 412 9 7521 3.5 7.0 5.2 1.5 7543 chr3R 15601173 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608716 intergenic not near genes chr3R_9_15600001 chr3R_15600001 RAL-367 1085 chr3R 15608800 15608817 chr3R 15609028 15609046 7 228 3.0 3.0 3.0 1.8 246 chr3R 15608800 intergenic not near genes chr3R 15608923 intergenic not near genes chr3R 15609046 intergenic not near genes chr3R_7_15605001 chr3R_15605001 RAL-367 1086 chr3R 15618753 15618764 chr3R 15626227 15626238 blood 4 7474 0.5 3.5 2.0 1.3 7485 chr3R 15618753 intergenic not near genes chr3R 15622496 intergenic not near genes chr3R 15626238 intergenic not near genes chr3R_4_15620001 chr3R_15620001 RAL-367 1087 chr3R 15691194 15691330 chr3R 15691299 15691417 8 92 0.5 0.5 0.5 5.3 223 chr3R 15691194 intergenic not near genes chr3R 15691306 intergenic not near genes chr3R 15691417 intergenic not near genes chr3R_8_15690001 chr3R_15690001 RAL-367 1088 chr3R 15773921 15773945 chr3R 15775223 15775247 6 1304 9.0 21.0 15.0 0.4 1326 chr3R 15773921 intergenic CR45206 -,CG4525 + chr3R 15774584 3` UTR,exon CR45206 -,CG4525 + chr3R 15775247 intron,3` UTR CG4525 +,CR45207 - chr3R_6_15770001 chr3R_15770001 RAL-367 1089 chr3R 15878601 15878635 chr3R 15878681 15878715 11 80 2.0 1.5 1.8 3.9 114 chr3R 15878601 intergenic not near genes chr3R 15878658 intergenic not near genes chr3R 15878715 intergenic not near genes chr3R_11_15875001 chr3R_15875001 RAL-367 1090 chr3R 16048851 16048880 chr3R 16048941 16048969 5 90 3.5 1.5 2.5 1.4 118 chr3R 16048851 intron ird5 - chr3R 16048910 intron ird5 - chr3R 16048969 intron ird5 - chr3R_5_16045001 chr3R_16045001 RAL-367 1091 chr3R 16472583 16472599 chr3R 16472658 16472675 7 75 5.5 4.5 5.0 1.2 92 chr3R 16472583 intergenic Gyc-89Da + chr3R 16472629 5` UTR Gyc-89Da + chr3R 16472675 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-367 1092 chr3R 16596128 16596152 chr3R 16600273 16600299 10 4146 21.5 11.0 16.2 0.6 4171 chr3R 16596128 exon CG14892 + chr3R 16598214 exon CG10345 - chr3R 16600299 intron CG10345 - chr3R_10_16595001 chr3R_16595001 RAL-367 1093 chr3R 16756320 16756348 chr3R 16762511 16762528 diver 10 6190 2.0 2.0 2.0 3.3 6208 chr3R 16756320 intron bxd - chr3R 16759424 intron bxd - chr3R 16762528 intron bxd - chr3R_10_16755001 chr3R_16755001 RAL-367 1094 chr3R 16875567 16875597 chr3R 16875683 16875714 7 111 4.5 2.5 3.5 1.6 147 chr3R 16875567 intron iab-8 - chr3R 16875640 intron iab-8 - chr3R 16875714 intron iab-8 - chr3R_7_16875001 chr3R_16875001 RAL-367 1095 chr3R 17120762 17120792 chr3R 17120849 17120879 6 87 2.0 2.5 2.2 1.9 117 chr3R 17120762 intron,3` UTR cher -,CG34278 + chr3R 17120820 intron cher - chr3R 17120879 intron cher - chr3R_6_17120001 chr3R_17120001 RAL-367 1096 chr3R 17121528 17121553 chr3R 17121723 17121748 9 195 1.0 0.5 0.8 5.0 220 chr3R 17121528 intron cher - chr3R 17121638 intron,exon cher -,CG42779 + chr3R 17121748 intron,exon cher -,CG42779 + chr3R_9_17120001 chr3R_17120001 RAL-367 1097 chr3R 17217627 17217638 chr3R 17217780 17217804 5 160 3.5 1.5 2.5 1.4 177 chr3R 17217627 exon CG31262 - chr3R 17217716 exon CG31262 - chr3R 17217804 exon CG31262 - chr3R_5_17215001 chr3R_17215001 RAL-367 1098 chr3R 17290443 17290472 chr3R 17290529 17290558 10 86 1.5 1.5 1.5 4.0 115 chr3R 17290443 intergenic not near genes chr3R 17290500 intergenic not near genes chr3R 17290558 intergenic not near genes chr3R_10_17290001 chr3R_17290001 RAL-367 1099 chr3R 17294668 17294699 chr3R 17295095 17295126 BS 4 428 0.5 2.5 1.5 1.6 458 chr3R 17294668 intergenic not near genes chr3R 17294897 intergenic not near genes chr3R 17295126 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-367 1100 chr3R 17316263 17316300 chr3R 17316420 17316457 6 157 1.0 1.5 1.2 2.7 194 chr3R 17316263 intergenic not near genes chr3R 17316360 intergenic not near genes chr3R 17316457 intergenic not near genes chr3R_6_17315001 chr3R_17315001 RAL-367 1101 chr3R 17355504 17355517 chr3R 17355577 17355595 6 75 5.0 4.5 4.8 1.0 91 chr3R 17355504 intron beat-IIa - chr3R 17355550 intron beat-IIa - chr3R 17355595 intron beat-IIa - chr3R_6_17355001 chr3R_17355001 RAL-367 1102 chr3R 17461203 17461231 chr3R 17461285 17461313 6 82 1.0 2.5 1.8 2.1 110 chr3R 17461203 intergenic not near genes chr3R 17461258 intergenic not near genes chr3R 17461313 intergenic not near genes chr3R_6_17460001 chr3R_17460001 RAL-367 1103 chr3R 17521571 17521590 chr3R 17521731 17521736 7 158 0.5 7.0 3.8 1.5 165 chr3R 17521571 intergenic not near genes chr3R 17521654 intergenic not near genes chr3R 17521736 intergenic not near genes chr3R_7_17520001 chr3R_17520001 RAL-367 1104 chr3R 17531907 17531912 chr3R 17531984 17531989 4 77 0.0 10.5 5.2 0.6 82 chr3R 17531907 intergenic CG5823 - chr3R 17531948 intergenic CG5823 - chr3R 17531989 intergenic CG5823 - chr3R_4_17530001 chr3R_17530001 RAL-367 1105 chr3R 17585635 17585657 chr3R 17585953 17585975 8 318 2.0 1.5 1.8 2.9 340 chr3R 17585635 intergenic not near genes chr3R 17585805 intergenic not near genes chr3R 17585975 intergenic not near genes chr3R_8_17585001 chr3R_17585001 RAL-367 1106 chr3R 17591290 17591315 chr3R 17591726 17591751 F-element 5 433 6.0 3.0 4.5 0.9 461 chr3R 17591290 intergenic not near genes chr3R 17591520 intergenic not near genes chr3R 17591751 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-367 1107 chr3R 17678807 17678828 chr3R 17678902 17678923 5 95 1.5 4.0 2.8 1.3 116 chr3R 17678807 intron alt - chr3R 17678865 intron alt - chr3R 17678923 intron alt - chr3R_5_17675001 chr3R_17675001 RAL-367 1108 chr3R 17858050 17858084 chr3R 17858142 17858176 4 92 1.0 2.5 1.8 1.4 126 chr3R 17858050 intron tinc + chr3R 17858113 intron tinc + chr3R 17858176 intron tinc + chr3R_4_17855001 chr3R_17855001 RAL-367 1109 chr3R 17925859 17925884 chr3R 17927322 17927351 hobo 8 1466 3.5 5.0 4.2 1.5 1492 chr3R 17925859 intron cpo + chr3R 17926605 intron cpo + chr3R 17927351 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-367 1110 chr3R 17938462 17938493 chr3R 17938544 17938575 13 81 3.5 4.5 4.0 2.6 113 chr3R 17938462 intron cpo + chr3R 17938518 intron cpo + chr3R 17938575 intron cpo + chr3R_13_17935001 chr3R_17935001 RAL-367 1111 chr3R 17978751 17978785 chr3R 17978826 17978865 12 78 4.0 3.0 3.5 2.7 114 chr3R 17978751 intron cpo + chr3R 17978808 intron cpo + chr3R 17978865 intron cpo + chr3R_12_17975001 chr3R_17975001 RAL-367 1112 chr3R 18078155 18078176 chr3R 18078234 18078255 6 79 3.0 0.5 1.8 2.1 100 chr3R 18078155 intergenic not near genes chr3R 18078205 intergenic not near genes chr3R 18078255 intergenic not near genes chr3R_6_18075001 chr3R_18075001 RAL-367 1113 chr3R 18140445 18140468 chr3R 18140517 18140544 5 76 2.0 1.5 1.8 1.8 99 chr3R 18140445 intergenic not near genes chr3R 18140494 intergenic not near genes chr3R 18140544 intergenic not near genes chr3R_5_18140001 chr3R_18140001 RAL-367 1114 chr3R 18235221 18235232 chr3R 18235387 18235408 8 173 3.5 1.5 2.5 2.3 187 chr3R 18235221 intergenic not near genes chr3R 18235314 intergenic not near genes chr3R 18235408 intergenic not near genes chr3R_8_18235001 chr3R_18235001 RAL-367 1115 chr3R 18341213 18341224 chr3R 18341315 18341326 5 102 0.0 3.0 1.5 2.0 113 chr3R 18341213 intron CG15803 - chr3R 18341270 intron CG15803 - chr3R 18341326 intron CG15803 - chr3R_5_18340001 chr3R_18340001 RAL-367 1116 chr3R 18606507 18606527 chr3R 18610739 18610759 F-element 5 4232 3.5 1.0 2.2 1.6 4252 chr3R 18606507 intron,intron qin +,CG14304 - chr3R 18608633 intron,intron qin +,CG14304 - chr3R 18610759 intron,intron qin +,CG14304 - chr3R_5_18605001 chr3R_18605001 RAL-367 1117 chr3R 18635204 18635223 chr3R 18635306 18635312 5 99 2.5 1.5 2.0 1.7 108 chr3R 18635204 intron,intron qin +,CG14301 - chr3R 18635258 intron,intron qin +,CG14301 - chr3R 18635312 intron,intron qin +,CG14301 - chr3R_5_18635001 chr3R_18635001 RAL-367 1118 chr3R 18703301 18703312 chr3R 18703409 18703420 5 108 0.0 0.0 0.0 5.0 119 chr3R 18703301 intergenic not near genes chr3R 18703360 intergenic not near genes chr3R 18703420 intergenic not near genes chr3R_5_18700001 chr3R_18700001 RAL-367 1119 chr3R 18730024 18730035 chr3R 18730100 18730111 4 76 1.5 2.5 2.0 1.3 87 chr3R 18730024 intron Cha + chr3R 18730068 intron Cha + chr3R 18730111 exon Cha + chr3R_4_18730001 chr3R_18730001 RAL-367 1120 chr3R 18766786 18766801 chr3R 18766864 18766871 8 77 3.0 5.0 4.0 1.6 85 chr3R 18766786 intron CG7720 - chr3R 18766828 intron CG7720 - chr3R 18766871 intron CG7720 - chr3R_8_18765001 chr3R_18765001 RAL-367 1121 chr3R 18802127 18802152 chr3R 18802212 18802237 5 84 2.0 0.5 1.2 2.3 110 chr3R 18802127 3` UTR CG18208 - chr3R 18802182 3` UTR CG18208 - chr3R 18802237 3` UTR CG18208 - chr3R_5_18800001 chr3R_18800001 RAL-367 1122 chr3R 18812079 18812106 chr3R 18812157 18812184 17 77 2.5 4.5 3.5 3.8 105 chr3R 18812079 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812184 intron CG18208 - chr3R_17_18810001 chr3R_18810001 RAL-367 1123 chr3R 18868611 18868622 chr3R 18868692 18868703 6 81 7.0 6.5 6.8 0.8 92 chr3R 18868611 intergenic not near genes chr3R 18868657 intergenic not near genes chr3R 18868703 intergenic not near genes chr3R_6_18865001 chr3R_18865001 RAL-367 1124 chr3R 18901675 18901706 chr3R 18901757 18901788 11 82 2.5 4.0 3.2 2.6 113 chr3R 18901675 3` UTR CG14294 - chr3R 18901732 3` UTR CG14294 - chr3R 18901788 exon CG14294 - chr3R_11_18900001 chr3R_18900001 RAL-367 1125 chr3R 18932554 18932572 chr3R 18932729 18932747 7 174 2.5 4.0 3.2 1.7 193 chr3R 18932554 intron CG42613 + chr3R 18932650 intron CG42613 + chr3R 18932747 intron CG42613 + chr3R_7_18930001 chr3R_18930001 RAL-367 1126 chr3R 19082539 19082561 chr3R 19082617 19082640 7 79 2.0 1.0 1.5 2.8 101 chr3R 19082539 intron cdi - chr3R 19082590 intron cdi - chr3R 19082640 intron cdi - chr3R_7_19080001 chr3R_19080001 RAL-367 1127 chr3R 19284726 19284746 chr3R 19284814 19284835 7 90 4.0 5.5 4.8 1.2 109 chr3R 19284726 intergenic not near genes chr3R 19284780 intergenic not near genes chr3R 19284835 intergenic not near genes chr3R_7_19280001 chr3R_19280001 RAL-367 1128 chr3R 19533001 19533293 chr3R 19533193 19533373 4 164 2.5 0.0 1.2 1.8 372 chr3R 19533001 intron Dys + chr3R 19533187 intron Dys + chr3R 19533373 intron Dys + chr3R_4_19530001 chr3R_19530001 RAL-367 1129 chr3R 19908287 19908302 chr3R 19908371 19908386 4 84 0.0 3.0 1.5 1.6 99 chr3R 19908287 intron RhoGAP92B + chr3R 19908336 intron RhoGAP92B + chr3R 19908386 intron RhoGAP92B + chr3R_4_19905001 chr3R_19905001 RAL-367 1130 chr3R 19914027 19914044 chr3R 19914120 19914137 6 93 0.0 3.5 1.8 2.1 110 chr3R 19914027 3` UTR RhoGAP92B + chr3R 19914082 3` UTR RhoGAP92B + chr3R 19914137 3` UTR RhoGAP92B + chr3R_6_19910001 chr3R_19910001 RAL-367 1131 chr3R 19970666 19970692 chr3R 19971020 19971022 5 349 1.5 2.0 1.8 1.8 356 chr3R 19970666 intron Hs6st - chr3R 19970844 intron Hs6st - chr3R 19971022 intron Hs6st - chr3R_5_19970001 chr3R_19970001 RAL-367 1132 chr3R 20008828 20008856 chr3R 20008909 20008937 7 81 1.0 4.5 2.8 1.8 109 chr3R 20008828 intergenic MED25 +,Hs6st - chr3R 20008882 intergenic MED25 +,Hs6st - chr3R 20008937 intergenic MED25 +,Hs6st - chr3R_7_20005001 chr3R_20005001 RAL-367 1133 chr3R 20059466 20059499 chr3R 20059546 20059579 11 80 1.5 3.5 2.5 3.1 113 chr3R 20059466 intron CG4390 - chr3R 20059522 intron CG4390 - chr3R 20059579 exon CG4390 - chr3R_11_20055001 chr3R_20055001 RAL-367 1134 chr3R 20109542 20109569 chr3R 20114748 20114775 copia 9 5204 1.0 3.5 2.2 2.8 5233 chr3R 20109542 intergenic not near genes chr3R 20112158 intergenic not near genes chr3R 20114775 intergenic CG10887 + chr3R_9_20110001 chr3R_20110001 RAL-367 1135 chr3R 20156695 20156723 chr3R 20165865 20165893 roo 4 9170 5.0 2.0 3.5 0.9 9198 chr3R 20156695 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165893 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-367 1136 chr3R 20195710 20195722 chr3R 20195785 20195798 5 76 2.5 3.0 2.8 1.3 88 chr3R 20195710 intergenic not near genes chr3R 20195754 intergenic not near genes chr3R 20195798 intergenic not near genes chr3R_5_20195001 chr3R_20195001 RAL-367 1137 chr3R 20197114 20197150 chr3R 20197191 20197227 17 75 2.5 1.5 2.0 5.7 113 chr3R 20197114 intergenic not near genes chr3R 20197170 intergenic not near genes chr3R 20197227 intergenic not near genes chr3R_17_20195001 chr3R_20195001 RAL-367 1138 chr3R 20266519 20266542 chr3R 20272985 20273013 Burdock 6 6470 3.0 1.5 2.2 1.9 6494 chr3R 20266519 intron cic + chr3R 20269766 intron cic + chr3R 20273013 intron cic + chr3R_6_20265001 chr3R_20265001 RAL-367 1139 chr3R 20286149 20286182 chr3R 20286256 20286289 13 106 2.0 0.0 1.0 6.5 140 chr3R 20286149 intron cic + chr3R 20286219 intron cic + chr3R 20286289 intron cic + chr3R_13_20285001 chr3R_20285001 RAL-367 1140 chr3R 20367366 20367380 chr3R 20367441 20367456 6 75 1.5 1.5 1.5 2.4 90 chr3R 20367366 intergenic not near genes chr3R 20367411 intergenic not near genes chr3R 20367456 intergenic not near genes chr3R_6_20365001 chr3R_20365001 RAL-367 1141 chr3R 20506586 20506600 chr3R 20507389 20507397 BS 4 802 1.0 1.5 1.2 1.8 811 chr3R 20506586 intergenic Or92a + chr3R 20506992 intergenic CG4288 - chr3R 20507397 3` UTR CG4288 - chr3R_4_20505001 chr3R_20505001 RAL-367 1142 chr3R 20516547 20516559 chr3R 20516903 20516915 4 356 5.5 2.5 4.0 0.8 368 chr3R 20516547 intergenic not near genes chr3R 20516731 intergenic not near genes chr3R 20516915 intergenic not near genes chr3R_4_20515001 chr3R_20515001 RAL-367 1143 chr3R 20519780 20519809 chr3R 20519866 20519895 4 86 3.5 1.5 2.5 1.1 115 chr3R 20519780 intergenic not near genes chr3R 20519838 intergenic not near genes chr3R 20519895 intergenic not near genes chr3R_4_20515001 chr3R_20515001 RAL-367 1144 chr3R 20594484 20594491 chr3R 20594574 20594581 4 90 3.5 0.0 1.8 1.4 97 chr3R 20594484 intron bon + chr3R 20594532 intron bon + chr3R 20594581 intron bon + chr3R_4_20590001 chr3R_20590001 RAL-367 1145 chr3R 20722860 20722881 chr3R 20722987 20723008 6 126 3.5 4.5 4.0 1.2 148 chr3R 20722860 intergenic not near genes chr3R 20722934 intergenic not near genes chr3R 20723008 intergenic not near genes chr3R_6_20720001 chr3R_20720001 RAL-367 1146 chr3R 20771713 20771726 chr3R 20771779 20771806 5 78 0.0 2.5 1.2 2.3 93 chr3R 20771713 intron,intron Syp +,Takl1 - chr3R 20771760 intron,intron Syp +,Takl1 - chr3R 20771806 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-367 1147 chr3R 20901344 20901376 chr3R 20901430 20901461 14 84 2.5 4.5 3.5 3.1 117 chr3R 20901344 intergenic not near genes chr3R 20901402 intergenic not near genes chr3R 20901461 intergenic CG5621 + chr3R_14_20900001 chr3R_20900001 RAL-367 1148 chr3R 21041109 21041131 chr3R 21041262 21041284 7 153 1.0 3.0 2.0 2.3 175 chr3R 21041109 exon Dhc93AB - chr3R 21041196 intron Dhc93AB - chr3R 21041284 intron Dhc93AB - chr3R_7_21040001 chr3R_21040001 RAL-367 1149 chr3R 21108039 21108060 chr3R 21108300 21108321 5 261 1.0 1.0 1.0 2.5 282 chr3R 21108039 intergenic Sec15 -,rtet + chr3R 21108180 intergenic Sec15 -,rtet + chr3R 21108321 intergenic rtet +,Sec15 - chr3R_5_21105001 chr3R_21105001 RAL-367 1150 chr3R 21141680 21141703 chr3R 21150156 21150174 Tirant 4 8477 3.0 5.0 4.0 0.8 8494 chr3R 21141680 intron SNF4Agamma + chr3R 21145927 intron SNF4Agamma + chr3R 21150174 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-367 1151 chr3R 21400604 21400628 chr3R 21400728 21400752 7 121 2.5 1.0 1.8 2.5 148 chr3R 21400604 intergenic not near genes chr3R 21400678 intergenic not near genes chr3R 21400752 intergenic not near genes chr3R_7_21400001 chr3R_21400001 RAL-367 1152 chr3R 21472019 21472035 chr3R 21472100 21472115 5 81 2.0 3.0 2.5 1.4 96 chr3R 21472019 intergenic not near genes chr3R 21472067 intergenic not near genes chr3R 21472115 intergenic not near genes chr3R_5_21470001 chr3R_21470001 RAL-367 1153 chr3R 21540234 21540263 chr3R 21540439 21540468 8 205 1.0 1.0 1.0 4.0 234 chr3R 21540234 intergenic not near genes chr3R 21540351 intergenic not near genes chr3R 21540468 intergenic not near genes chr3R_8_21540001 chr3R_21540001 RAL-367 1154 chr3R 21545603 21545623 chr3R 21545676 21545700 5 76 2.0 3.0 2.5 1.4 97 chr3R 21545603 intergenic not near genes chr3R 21545652 intergenic not near genes chr3R 21545700 intergenic not near genes chr3R_5_21545001 chr3R_21545001 RAL-367 1155 chr3R 21586416 21586452 chr3R 21586500 21586535 8 82 2.5 3.0 2.8 2.1 119 chr3R 21586416 intron InR - chr3R 21586476 intron InR - chr3R 21586535 intron InR - chr3R_8_21585001 chr3R_21585001 RAL-367 1156 chr3R 21609002 21609034 chr3R 21611636 21611668 NOF 8 2634 2.0 3.0 2.5 2.3 2666 chr3R 21609002 intron InR - chr3R 21610335 intron InR - chr3R 21611668 intron InR - chr3R_8_21610001 chr3R_21610001 RAL-367 1157 chr3R 21662185 21662215 chr3R 21662317 21662347 6 130 1.5 1.0 1.2 2.7 162 chr3R 21662185 exon CG6353 - chr3R 21662266 intron CG6353 - chr3R 21662347 intron CG6353 - chr3R_6_21660001 chr3R_21660001 RAL-367 1158 chr3R 21758683 21758711 chr3R 21758764 21758792 9 81 3.0 4.0 3.5 2.0 109 chr3R 21758683 intergenic CG42335 + chr3R 21758738 intergenic CG42335 + chr3R 21758792 exon CG42335 + chr3R_9_21755001 chr3R_21755001 RAL-367 1159 chr3R 21761126 21761151 chr3R 21768518 21768528 mdg1 10 7387 3.5 5.5 4.5 1.8 7402 chr3R 21761126 exon CG42335 + chr3R 21764827 intron CG42335 + chr3R 21768528 exon CG42335 + chr3R_10_21760001 chr3R_21760001 RAL-367 1160 chr3R 21337429 21337429 chr3R 21907534 21907534 4 570105 5.5 18.5 12.0 0.3 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_4_21620001 chr3R_21620001 RAL-367 1161 chr3R 21907534 21907534 chr3R 28831801 28831802 7 6924268 17.5 13.0 15.2 0.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-367 1162 chr3R 8339246 8339247 chr3R 21907535 21907535 7 13568288 5.5 19.0 12.2 0.5 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-367 1163 chr3R 21907535 21907535 chr3R 28831801 28831802 14 6924266 17.5 13.0 15.2 0.9 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-367 1164 chr3R 21907536 21907536 chr3R 28831801 28831802 24 6924266 17.5 13.0 15.2 1.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_24_25365001 chr3R_25365001 RAL-367 1165 chr3R 22108356 22108387 chr3R 22108588 22108618 8 231 4.0 1.5 2.8 2.1 262 chr3R 22108356 intron CG5778 - chr3R 22108487 intron CG5778 - chr3R 22108618 intron CG5778 - chr3R_8_22105001 chr3R_22105001 RAL-367 1166 chr3R 22234687 22234711 chr3R 22236006 22236030 pogo 6 1319 2.5 0.5 1.5 2.4 1343 chr3R 22234687 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236030 intron SKIP + chr3R_6_22235001 chr3R_22235001 RAL-367 1167 chr3R 22330605 22330619 chr3R 22332310 22332341 9 1707 15.0 16.5 15.8 0.5 1736 chr3R 22330605 intergenic CG7080 +,CG33721 + chr3R 22331473 exon CG33721 + chr3R 22332341 exon CG13862 + chr3R_9_22330001 chr3R_22330001 RAL-367 1168 chr3R 22428578 22428607 chr3R 22428654 22428683 8 76 4.0 2.5 3.2 1.9 105 chr3R 22428578 intron CG13847 - chr3R 22428630 intron CG13847 - chr3R 22428683 intron CG13847 - chr3R_8_22425001 chr3R_22425001 RAL-367 1169 chr3R 22433090 22433097 chr3R 22433190 22433191 4 98 3.0 7.0 5.0 0.7 101 chr3R 22433090 intron CG13847 - chr3R 22433140 intron CG13847 - chr3R 22433191 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-367 1170 chr3R 22449976 22449995 chr3R 22450057 22450088 6 88 0.5 2.0 1.2 2.7 112 chr3R 22449976 intron CG34376 + chr3R 22450032 intron CG34376 + chr3R 22450088 intron CG34376 + chr3R_6_22450001 chr3R_22450001 RAL-367 1171 chr3R 22450540 22450578 chr3R 22453180 22453208 NOF 12 2639 3.0 6.0 4.5 2.2 2668 chr3R 22450540 intron CG34376 + chr3R 22451874 intron CG34376 + chr3R 22453208 intron CG34376 + chr3R_12_22450001 chr3R_22450001 RAL-367 1172 chr3R 22510862 22510895 chr3R 22510938 22510971 9 76 3.0 4.5 3.8 1.9 109 chr3R 22510862 intron Octbeta1R + chr3R 22510916 intron Octbeta1R + chr3R 22510971 intron Octbeta1R + chr3R_9_22510001 chr3R_22510001 RAL-367 1173 chr3R 22769090 22769126 chr3R 22769167 22769203 7 77 1.0 3.0 2.0 2.3 113 chr3R 22769090 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769203 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_7_22765001 chr3R_22765001 RAL-367 1174 chr3R 22779476 22779505 chr3R 22779554 22779583 6 74 3.5 2.5 3.0 1.5 107 chr3R 22779476 intron,3` UTR CG7029 +,CR43654 - chr3R 22779530 intron,3` UTR CG7029 +,CR43654 - chr3R 22779583 intron,3` UTR CG7029 +,CR43654 - chr3R_6_22775001 chr3R_22775001 RAL-367 1175 chr3R 22797759 22797930 chr3R 22797845 22798026 18 90 0.5 0.0 0.2 15.0 267 chr3R 22797759 intergenic not near genes chr3R 22797892 intergenic not near genes chr3R 22798026 intergenic not near genes chr3R_18_22795001 chr3R_22795001 RAL-367 1176 chr3R 22804673 22804699 chr3R 22804751 22804777 5 78 1.5 2.0 1.8 1.8 104 chr3R 22804673 intron CG7031 + chr3R 22804725 intron CG7031 + chr3R 22804777 exon CG7031 + chr3R_5_22800001 chr3R_22800001 RAL-367 1177 chr3R 22829793 22829817 chr3R 22829875 22829899 6 81 0.0 0.5 0.2 5.0 106 chr3R 22829793 intergenic not near genes chr3R 22829846 intergenic not near genes chr3R 22829899 intergenic not near genes chr3R_6_22825001 chr3R_22825001 RAL-367 1178 chr3R 22842389 22842418 chr3R 22842488 22842492 8 96 4.5 2.0 3.2 1.9 103 chr3R 22842389 intergenic not near genes chr3R 22842440 intergenic not near genes chr3R 22842492 intergenic not near genes chr3R_8_22840001 chr3R_22840001 RAL-367 1179 chr3R 22880949 22880960 chr3R 22881077 22881097 4 135 0.5 0.5 0.5 2.7 148 chr3R 22880949 intergenic not near genes chr3R 22881023 intergenic not near genes chr3R 22881097 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-367 1180 chr3R 23073653 23073681 chr3R 23073742 23073770 7 88 4.0 1.5 2.8 1.8 117 chr3R 23073653 intron CG13830 - chr3R 23073712 intron CG13830 - chr3R 23073770 intron CG13830 - chr3R_7_23070001 chr3R_23070001 RAL-367 1181 chr3R 23090408 23090436 chr3R 23090490 23090519 9 83 0.0 3.5 1.8 3.2 111 chr3R 23090408 intron CG13830 - chr3R 23090464 intron CG13830 - chr3R 23090519 intron CG13830 - chr3R_9_23090001 chr3R_23090001 RAL-367 1182 chr3R 23100157 23100431 chr3R 23100244 23100508 18 84 5.0 2.0 3.5 4.0 351 chr3R 23100157 intron,exon CG13830 -,CG6738 + chr3R 23100332 intron,exon CG13830 -,CG6738 + chr3R 23100508 intron,exon CG13830 -,CG6738 + chr3R_18_23100001 chr3R_23100001 RAL-367 1183 chr3R 23100658 23100672 chr3R 23101169 23101183 4 511 1.5 1.5 1.5 1.6 525 chr3R 23100658 intron,exon CG13830 -,CG6738 + chr3R 23100920 intron,exon CG13830 -,CG6738 + chr3R 23101183 intron CG13830 - chr3R_4_23100001 chr3R_23100001 RAL-367 1184 chr3R 23245996 23246024 chr3R 23246078 23246081 5 77 1.5 4.0 2.8 1.3 85 chr3R 23245996 intron CG4467 - chr3R 23246038 intron CG4467 - chr3R 23246081 intron CG4467 - chr3R_5_23245001 chr3R_23245001 RAL-367 1185 chr3R 23291252 23291282 chr3R 23291338 23291368 10 84 5.0 4.0 4.5 1.8 116 chr3R 23291252 3` UTR pnt - chr3R 23291310 3` UTR pnt - chr3R 23291368 exon pnt - chr3R_10_23290001 chr3R_23290001 RAL-367 1186 chr3R 23446280 23446310 chr3R 23446357 23446388 8 78 3.0 3.5 3.2 1.9 108 chr3R 23446280 intron CG4374 - chr3R 23446334 intron CG4374 - chr3R 23446388 intron CG4374 - chr3R_8_23445001 chr3R_23445001 RAL-367 1187 chr3R 23536948 23536973 chr3R 23537130 23537155 5 182 2.0 4.5 3.2 1.2 207 chr3R 23536948 intergenic CG10168 -,CG16732 - chr3R 23537052 exon CG10168 - chr3R 23537155 exon CG10168 - chr3R_5_23535001 chr3R_23535001 RAL-367 1188 chr3R 23548078 23548102 chr3R 23548383 23548407 8 300 0.0 4.5 2.2 2.5 329 chr3R 23548078 intergenic not near genes chr3R 23548242 intergenic not near genes chr3R 23548407 intergenic not near genes chr3R_8_23545001 chr3R_23545001 RAL-367 1189 chr3R 23667069 23667090 chr3R 23667486 23667511 6 420 3.0 2.5 2.8 1.6 442 chr3R 23667069 intron CG31145 - chr3R 23667290 intron CG31145 - chr3R 23667511 intron CG31145 - chr3R_6_23665001 chr3R_23665001 RAL-367 1190 chr3R 23684695 23684707 chr3R 23685181 23685193 roo 4 486 5.0 3.0 4.0 0.8 498 chr3R 23684695 exon CG18754 + chr3R 23684944 intron CG18754 + chr3R 23685193 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-367 1191 chr3R 23820635 23820666 chr3R 23820719 23820750 9 84 2.5 3.0 2.8 2.4 115 chr3R 23820635 5` UTR CG34355 + chr3R 23820692 5` UTR CG34355 + chr3R 23820750 5` UTR CG34355 + chr3R_9_23820001 chr3R_23820001 RAL-367 1192 chr3R 23944911 23944931 chr3R 23944996 23945016 4 85 3.5 3.0 3.2 1.0 105 chr3R 23944911 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945016 exon CG12268 - chr3R_4_23940001 chr3R_23940001 RAL-367 1193 chr3R 24072091 24072102 chr3R 24072529 24072540 jockey 6 438 5.0 0.5 2.8 1.6 449 chr3R 24072091 intron 4EHP - chr3R 24072316 intron 4EHP - chr3R 24072540 intron 4EHP - chr3R_6_24070001 chr3R_24070001 RAL-367 1194 chr3R 24100458 24100479 chr3R 24100553 24100574 4 94 1.0 0.0 0.5 2.7 116 chr3R 24100458 intron 4EHP - chr3R 24100516 intron 4EHP - chr3R 24100574 intron 4EHP - chr3R_4_24100001 chr3R_24100001 RAL-367 1195 chr3R 24207217 24207242 chr3R 24212293 24212318 flea 4 5075 5.0 4.5 4.8 0.7 5101 chr3R 24207217 intron twin - chr3R 24209768 intron twin - chr3R 24212318 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-367 1196 chr3R 24431602 24431627 chr3R 24431681 24431706 4 79 1.0 0.5 0.8 2.2 104 chr3R 24431602 intron nAChRalpha1 - chr3R 24431654 intron nAChRalpha1 - chr3R 24431706 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-367 1197 chr3R 24433481 24433500 chr3R 24433560 24433579 4 79 2.0 3.0 2.5 1.1 98 chr3R 24433481 intron nAChRalpha1 - chr3R 24433530 intron nAChRalpha1 - chr3R 24433579 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-367 1198 chr3R 24493286 24493306 chr3R 24493514 24493535 BS 4 229 1.0 3.0 2.0 1.3 249 chr3R 24493286 intergenic not near genes chr3R 24493410 intergenic not near genes chr3R 24493535 intergenic not near genes chr3R_4_24490001 chr3R_24490001 RAL-367 1199 chr3R 24527802 24527835 chr3R 24527893 24527926 6 91 0.5 1.0 0.8 3.3 124 chr3R 24527802 intergenic CG6607 +,CG13618 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527926 intergenic CG6607 +,CG13618 + chr3R_6_24525001 chr3R_24525001 RAL-367 1200 chr3R 24605547 24605557 chr3R 24605647 24605656 4 99 2.5 5.5 4.0 0.8 109 chr3R 24605547 intron mld + chr3R 24605602 intron mld + chr3R 24605656 intron mld + chr3R_4_24605001 chr3R_24605001 RAL-367 1201 chr3R 24624376 24624394 chr3R 24624465 24624482 5 89 2.0 3.5 2.8 1.3 106 chr3R 24624376 intron Syx18 - chr3R 24624429 intron Syx18 - chr3R 24624482 exon Syx18 - chr3R_5_24620001 chr3R_24620001 RAL-367 1202 chr3R 24730091 24730119 chr3R 24732469 24732497 Doc 7 2378 2.0 0.5 1.2 3.2 2406 chr3R 24730091 intron tok + chr3R 24731294 intron tok + chr3R 24732497 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-367 1203 chr3R 24842104 24842132 chr3R 24842190 24842218 10 86 3.5 4.0 3.8 2.1 114 chr3R 24842104 5` UTR Esp + chr3R 24842161 5` UTR Esp + chr3R 24842218 5` UTR Esp + chr3R_10_24840001 chr3R_24840001 RAL-367 1204 chr3R 24973948 24973985 chr3R 24974024 24974061 11 76 1.5 2.5 2.0 3.7 113 chr3R 24973948 intergenic not near genes chr3R 24974004 intergenic not near genes chr3R 24974061 intergenic not near genes chr3R_11_24970001 chr3R_24970001 RAL-367 1205 chr3R 24974915 24974934 chr3R 24974993 24975013 8 79 2.0 4.0 3.0 2.0 98 chr3R 24974915 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975013 intergenic not near genes chr3R_8_24970001 chr3R_24970001 RAL-367 1206 chr3R 25018254 25018292 chr3R 25018331 25018366 17 72 3.5 2.0 2.8 4.5 112 chr3R 25018254 exon tnc + chr3R 25018310 exon tnc + chr3R 25018366 exon tnc + chr3R_17_25015001 chr3R_25015001 RAL-367 1207 chr3R 25159507 25159538 chr3R 25159595 25159626 10 88 1.0 2.0 1.5 4.0 119 chr3R 25159507 intergenic not near genes chr3R 25159566 intergenic not near genes chr3R 25159626 intergenic not near genes chr3R_10_25155001 chr3R_25155001 RAL-367 1208 chr3R 25166365 25166391 chr3R 25166441 25166467 4 76 0.0 0.5 0.2 3.3 102 chr3R 25166365 intergenic not near genes chr3R 25166416 intergenic not near genes chr3R 25166467 intergenic not near genes chr3R_4_25165001 chr3R_25165001 RAL-367 1209 chr3R 25203343 25203381 chr3R 25203473 25203511 13 130 2.0 1.5 1.8 4.6 168 chr3R 25203343 intron,intron Cad96Ca -,CG13654 + chr3R 25203427 intron,intron Cad96Ca -,CG13654 + chr3R 25203511 intron,intron Cad96Ca -,CG13654 + chr3R_13_25200001 chr3R_25200001 RAL-367 1210 chr3R 25209596 25209629 chr3R 25209678 25209680 8 76 0.0 3.0 1.5 3.2 84 chr3R 25209596 intron CG13654 + chr3R 25209638 intron CG13654 + chr3R 25209680 intron CG13654 + chr3R_8_25205001 chr3R_25205001 RAL-367 1211 chr3R 25268690 25268707 chr3R 25270790 25270807 7 2099 2.0 3.5 2.8 1.8 2117 chr3R 25268690 intron CR45214 - chr3R 25269748 intron CR45214 - chr3R 25270807 exon,5` UTR CG11889 +,CG11891 + chr3R_7_25265001 chr3R_25265001 RAL-367 1212 chr3R 25464493 25464524 chr3R 25464810 25464841 7 317 1.5 2.0 1.8 2.5 348 chr3R 25464493 intron Fur1 - chr3R 25464667 intron Fur1 - chr3R 25464841 intron Fur1 - chr3R_7_25460001 chr3R_25460001 RAL-367 1213 chr3R 25524588 25524609 chr3R 25524673 25524694 9 83 2.0 2.0 2.0 3.0 106 chr3R 25524588 intron msi + chr3R 25524641 intron msi + chr3R 25524694 intron msi + chr3R_9_25520001 chr3R_25520001 RAL-367 1214 chr3R 25696319 25696342 chr3R 25696404 25696411 11 78 5.5 1.0 3.2 2.6 92 chr3R 25696319 intergenic not near genes chr3R 25696365 intergenic not near genes chr3R 25696411 intergenic not near genes chr3R_11_25695001 chr3R_25695001 RAL-367 1215 chr3R 25832711 25832723 chr3R 25841878 25841905 roo 5 9179 4.0 4.0 4.0 1.0 9194 chr3R 25832711 exon alpha4GT2 + chr3R 25837308 intron alpha4GT2 + chr3R 25841905 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-367 1216 chr3R 25927507 25927528 chr3R 25927589 25927610 4 82 2.0 0.0 1.0 2.0 103 chr3R 25927507 intron CCAP-R - chr3R 25927558 intron CCAP-R - chr3R 25927610 intron CCAP-R - chr3R_4_25925001 chr3R_25925001 RAL-367 1217 chr3R 25962434 25962448 chr3R 25962542 25962561 7 112 4.0 3.0 3.5 1.6 127 chr3R 25962434 intron boss + chr3R 25962498 intron boss + chr3R 25962561 intron boss + chr3R_7_25960001 chr3R_25960001 RAL-367 1218 chr3R 26038973 26038992 chr3R 26039110 26039129 4 137 2.5 1.0 1.8 1.4 156 chr3R 26038973 intergenic not near genes chr3R 26039051 intergenic not near genes chr3R 26039129 intergenic not near genes chr3R_4_26035001 chr3R_26035001 RAL-367 1219 chr3R 26093844 26093868 chr3R 26093922 26093946 6 78 4.0 2.0 3.0 1.5 102 chr3R 26093844 intron dys - chr3R 26093895 intron dys - chr3R 26093946 intron dys - chr3R_6_26090001 chr3R_26090001 RAL-367 1220 chr3R 26144690 26144721 chr3R 26144768 26144786 8 76 1.5 1.0 1.2 3.6 96 chr3R 26144690 intergenic not near genes chr3R 26144738 intergenic not near genes chr3R 26144786 intergenic not near genes chr3R_8_26140001 chr3R_26140001 RAL-367 1221 chr3R 26292104 26292136 chr3R 26292184 26292216 7 80 0.0 1.5 0.8 3.9 112 chr3R 26292104 intergenic not near genes chr3R 26292160 intergenic not near genes chr3R 26292216 intergenic not near genes chr3R_7_26290001 chr3R_26290001 RAL-367 1222 chr3R 26294716 26294748 chr3R 26294794 26294826 7 77 2.5 0.0 1.2 3.2 110 chr3R 26294716 intergenic not near genes chr3R 26294771 intergenic not near genes chr3R 26294826 intergenic not near genes chr3R_7_26290001 chr3R_26290001 RAL-367 1223 chr3R 26376323 26376355 chr3R 26385483 26385515 roo 6 9158 1.0 0.0 0.5 4.0 9192 chr3R 26376323 intergenic not near genes chr3R 26380919 intergenic not near genes chr3R 26385515 intergenic not near genes chr3R_6_26380001 chr3R_26380001 RAL-367 1224 chr3R 26456641 26456665 chr3R 26456719 26456738 6 77 4.0 0.0 2.0 2.0 97 chr3R 26456641 intergenic CG14237 +,Pdf - chr3R 26456690 intergenic CG14237 + chr3R 26456738 intergenic CG14237 + chr3R_6_26455001 chr3R_26455001 RAL-367 1225 chr3R 26488498 26488521 chr3R 26488574 26488597 8 76 2.5 8.5 5.5 1.2 99 chr3R 26488498 intron plum - chr3R 26488548 intron plum - chr3R 26488597 intron plum - chr3R_8_26485001 chr3R_26485001 RAL-367 1226 chr3R 26542061 26542079 chr3R 26542135 26542170 11 87 3.0 2.0 2.5 3.1 109 chr3R 26542061 intron scrib + chr3R 26542116 intron scrib + chr3R 26542170 intron scrib + chr3R_11_26540001 chr3R_26540001 RAL-367 1227 chr3R 26641648 26641663 chr3R 26641723 26641749 7 85 1.5 2.5 2.0 2.3 101 chr3R 26641648 intergenic not near genes chr3R 26641698 intergenic not near genes chr3R 26641749 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-367 1228 chr3R 26642730 26642760 chr3R 26643123 26643142 jockey 9 391 1.5 3.0 2.2 2.8 412 chr3R 26642730 intergenic not near genes chr3R 26642936 intergenic not near genes chr3R 26643142 intergenic not near genes chr3R_9_26640001 chr3R_26640001 RAL-367 1229 chr3R 26669664 26669690 chr3R 26669746 26669772 4 82 2.0 1.5 1.8 1.4 108 chr3R 26669664 intron beat-VII - chr3R 26669718 intron beat-VII - chr3R 26669772 intron beat-VII - chr3R_4_26665001 chr3R_26665001 RAL-367 1230 chr3R 26712191 26712226 chr3R 26712466 26712500 10 275 2.0 2.5 2.2 3.1 309 chr3R 26712191 intron amon - chr3R 26712346 intron amon - chr3R 26712500 intron amon - chr3R_10_26710001 chr3R_26710001 RAL-367 1231 chr3R 26870796 26870827 chr3R 26870874 26870905 11 77 1.5 2.0 1.8 3.9 109 chr3R 26870796 intron BM-40-SPARC - chr3R 26870850 intron BM-40-SPARC - chr3R 26870905 intron BM-40-SPARC - chr3R_11_26870001 chr3R_26870001 RAL-367 1232 chr3R 26917292 26917322 chr3R 26917375 26917403 5 83 0.5 0.5 0.5 3.3 111 chr3R 26917292 intron sda + chr3R 26917348 intron sda + chr3R 26917403 intron sda + chr3R_5_26915001 chr3R_26915001 RAL-367 1233 chr3R 26981087 26981116 chr3R 26981172 26981201 6 85 1.0 2.0 1.5 2.4 114 chr3R 26981087 intron CG14253 + chr3R 26981144 intron CG14253 + chr3R 26981201 intron CG14253 + chr3R_6_26980001 chr3R_26980001 RAL-367 1234 chr3R 27007413 27007429 chr3R 27016548 27016564 roo 5 9135 2.5 1.0 1.8 1.8 9151 chr3R 27007413 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016564 intron RYa-R + chr3R_5_27010001 chr3R_27010001 RAL-367 1235 chr3R 27028724 27028755 chr3R 27028803 27028831 8 78 0.0 2.0 1.0 4.0 107 chr3R 27028724 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028831 intron RYa-R + chr3R_8_27025001 chr3R_27025001 RAL-367 1236 chr3R 27140513 27140547 chr3R 27148123 27148157 412 10 7610 3.5 2.0 2.8 2.6 7644 chr3R 27140513 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148157 intron CG6051 - chr3R_10_27140001 chr3R_27140001 RAL-367 1237 chr3R 27218710 27218740 chr3R 27218800 27218821 9 87 0.5 3.0 1.8 3.2 111 chr3R 27218710 intergenic not near genes chr3R 27218766 intergenic not near genes chr3R 27218821 intergenic not near genes chr3R_9_27215001 chr3R_27215001 RAL-367 1238 chr3R 27327429 27327441 chr3R 27327508 27327520 4 79 3.0 4.0 3.5 0.9 91 chr3R 27327429 intergenic not near genes chr3R 27327474 intergenic not near genes chr3R 27327520 intergenic not near genes chr3R_4_27325001 chr3R_27325001 RAL-367 1239 chr3R 27327442 27327453 chr3R 27327506 27327533 6 76 2.5 4.0 3.2 1.4 91 chr3R 27327442 intergenic not near genes chr3R 27327488 intergenic not near genes chr3R 27327533 intergenic not near genes chr3R_6_27325001 chr3R_27325001 RAL-367 1240 chr3R 27342791 27342824 chr3R 27351372 27351405 Tirant 7 8578 0.5 1.0 0.8 3.9 8614 chr3R 27342791 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-367 1241 chr3R 27377474 27377502 chr3R 27377562 27377585 5 87 2.5 2.0 2.2 1.6 111 chr3R 27377474 3` UTR side - chr3R 27377530 3` UTR side - chr3R 27377585 3` UTR side - chr3R_5_27375001 chr3R_27375001 RAL-367 1242 chr3R 27515424 27515435 chr3R 27515503 27515514 4 78 1.5 6.5 4.0 0.8 90 chr3R 27515424 intergenic CG13972 - chr3R 27515469 intergenic CG13972 - chr3R 27515514 intergenic CG13972 - chr3R_4_27515001 chr3R_27515001 RAL-367 1243 chr3R 27627085 27627120 chr3R 27627187 27627222 7 100 1.5 5.5 3.5 1.6 137 chr3R 27627085 intron Tusp + chr3R 27627154 intron Tusp + chr3R 27627222 intron Tusp + chr3R_7_27625001 chr3R_27625001 RAL-367 1244 chr3R 27706789 27706805 chr3R 27706866 27706882 7 77 4.0 2.0 3.0 1.8 93 chr3R 27706789 intergenic CG12428 -,CG12877 + chr3R 27706836 intergenic CG12428 -,CG12877 + chr3R 27706882 intergenic CG12428 -,CG12877 + chr3R_7_27705001 chr3R_27705001 RAL-367 1245 chr3R 27718587 27718599 chr3R 27718658 27718678 6 78 3.0 2.0 2.5 1.7 91 chr3R 27718587 intergenic not near genes chr3R 27718632 intergenic not near genes chr3R 27718678 intergenic not near genes chr3R_6_27715001 chr3R_27715001 RAL-367 1246 chr3R 27779281 27779286 chr3R 27779358 27779363 5 77 3.0 5.5 4.2 1.0 82 chr3R 27779281 exon CG34353 - chr3R 27779322 intron CG34353 - chr3R 27779363 intron CG34353 - chr3R_5_27775001 chr3R_27775001 RAL-367 1247 chr3R 27813822 27813840 chr3R 27813926 27813944 7 104 1.5 0.0 0.8 3.9 122 chr3R 27813822 intron CG34353 - chr3R 27813883 intron CG34353 - chr3R 27813944 intron CG34353 - chr3R_7_27810001 chr3R_27810001 RAL-367 1248 chr3R 27822270 27822289 chr3R 27822956 27822968 6 683 2.0 2.5 2.2 1.9 698 chr3R 27822270 intron CG34353 - chr3R 27822619 intron CG34353 - chr3R 27822968 intron CG34353 - chr3R_6_27820001 chr3R_27820001 RAL-367 1249 chr3R 27829904 27829914 chr3R 27829983 27829993 4 78 4.5 0.0 2.2 1.2 89 chr3R 27829904 intron CG34353 - chr3R 27829948 intron CG34353 - chr3R 27829993 intron CG34353 - chr3R_4_27825001 chr3R_27825001 RAL-367 1250 chr3R 27856759 27856793 chr3R 27858242 27858275 hopper2 13 1483 1.0 2.5 1.8 4.6 1516 chr3R 27856759 intron CG34353 - chr3R 27857517 intron CG34353 - chr3R 27858275 intron CG34353 - chr3R_13_27855001 chr3R_27855001 RAL-367 1251 chr3R 27862953 27862986 chr3R 27868258 27868291 Transpac 12 5304 2.0 3.0 2.5 3.4 5338 chr3R 27862953 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868291 intron CG34353 - chr3R_12_27865001 chr3R_27865001 RAL-367 1252 chr3R 27875708 27875727 chr3R 27882753 27882782 297 6 7053 4.0 2.0 3.0 1.5 7074 chr3R 27875708 intron CG34353 - chr3R 27879245 intron CG34353 - chr3R 27882782 intron CG34353 - chr3R_6_27875001 chr3R_27875001 RAL-367 1253 chr3R 28005670 28005693 chr3R 28005773 28005796 6 98 2.5 3.0 2.8 1.6 126 chr3R 28005670 intergenic not near genes chr3R 28005733 intergenic not near genes chr3R 28005796 intergenic not near genes chr3R_6_28005001 chr3R_28005001 RAL-367 1254 chr3R 28035489 28035506 chr3R 28035566 28035583 4 77 1.0 1.0 1.0 2.0 94 chr3R 28035489 intron CG34362 + chr3R 28035536 intron CG34362 + chr3R 28035583 intron CG34362 + chr3R_4_28035001 chr3R_28035001 RAL-367 1255 chr3R 28040936 28040939 chr3R 28041017 28041020 4 81 0.5 0.5 0.5 2.7 84 chr3R 28040936 intron CG34362 + chr3R 28040978 intron CG34362 + chr3R 28041020 intron CG34362 + chr3R_4_28040001 chr3R_28040001 RAL-367 1256 chr3R 28068493 28068523 chr3R 28073935 28073965 I-element 8 5442 0.0 3.5 1.8 2.9 5472 chr3R 28068493 intron CG34362 + chr3R 28071229 intron CG34362 + chr3R 28073965 intron CG34362 + chr3R_8_28070001 chr3R_28070001 RAL-367 1257 chr3R 28103323 28103350 chr3R 28103415 28103434 8 91 1.0 1.5 1.2 3.6 111 chr3R 28103323 intergenic not near genes chr3R 28103378 intergenic not near genes chr3R 28103434 intergenic not near genes chr3R_8_28100001 chr3R_28100001 RAL-367 1258 chr3R 28115510 28115542 chr3R 28115586 28115618 10 75 4.0 2.0 3.0 2.5 108 chr3R 28115510 intergenic not near genes chr3R 28115564 intergenic not near genes chr3R 28115618 intergenic not near genes chr3R_10_28115001 chr3R_28115001 RAL-367 1259 chr3R 28131575 28131599 chr3R 28131860 28131876 6 284 1.5 3.5 2.5 1.7 301 chr3R 28131575 intergenic not near genes chr3R 28131726 intergenic not near genes chr3R 28131876 intergenic not near genes chr3R_6_28130001 chr3R_28130001 RAL-367 1260 chr3R 28173672 28173700 chr3R 28181102 28181130 mdg1 7 7430 1.0 3.0 2.0 2.3 7458 chr3R 28173672 intron CG34354 + chr3R 28177401 intron CG34354 + chr3R 28181130 intron CG34354 + chr3R_7_28175001 chr3R_28175001 RAL-367 1261 chr3R 28253351 28253373 chr3R 28255860 28255883 jockey 7 2510 3.0 5.5 4.2 1.3 2532 chr3R 28253351 intergenic not near genes chr3R 28254617 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-367 1262 chr3R 28304649 28304655 chr3R 28304736 28304742 4 87 2.5 1.0 1.8 1.4 93 chr3R 28304649 intergenic CG12516 - chr3R 28304696 intergenic CG12516 - chr3R 28304742 intergenic CG12516 - chr3R_4_28300001 chr3R_28300001 RAL-367 1263 chr3R 28307299 28307313 chr3R 28307498 28307513 4 200 4.5 5.0 4.8 0.7 214 chr3R 28307299 intergenic not near genes chr3R 28307406 intergenic not near genes chr3R 28307513 intergenic not near genes chr3R_4_28305001 chr3R_28305001 RAL-367 1264 chr3R 28352512 28352542 chr3R 28352851 28352882 15 340 1.5 4.0 2.8 3.9 370 chr3R 28352512 exon Or98b + chr3R 28352697 exon Or98b + chr3R 28352882 exon Or98b + chr3R_15_28350001 chr3R_28350001 RAL-367 1265 chr3R 28358855 28358884 chr3R 28359195 28359223 11 339 2.5 4.0 3.2 2.6 368 chr3R 28358855 intergenic not near genes chr3R 28359039 intergenic not near genes chr3R 28359223 intergenic not near genes chr3R_11_28355001 chr3R_28355001 RAL-367 1266 chr3R 28380788 28380825 chr3R 28381022 28381059 9 233 1.0 2.0 1.5 3.6 271 chr3R 28380788 intergenic not near genes chr3R 28380924 intergenic not near genes chr3R 28381059 intergenic not near genes chr3R_9_28380001 chr3R_28380001 RAL-367 1267 chr3R 28382151 28382168 chr3R 28382234 28382251 6 83 3.5 2.0 2.8 1.6 100 chr3R 28382151 intergenic not near genes chr3R 28382201 intergenic not near genes chr3R 28382251 intergenic not near genes chr3R_6_28380001 chr3R_28380001 RAL-367 1268 chr3R 28403054 28403056 chr3R 28403159 28403166 4 113 1.0 3.5 2.2 1.2 112 chr3R 28403054 intergenic not near genes chr3R 28403110 intergenic not near genes chr3R 28403166 intergenic not near genes chr3R_4_28400001 chr3R_28400001 RAL-367 1269 chr3R 28626195 28626207 chr3R 28626295 28626307 8 100 5.5 4.5 5.0 1.3 112 chr3R 28626195 intron CG10011 - chr3R 28626251 intron CG10011 - chr3R 28626307 intron CG10011 - chr3R_8_28625001 chr3R_28625001 RAL-367 1270 chr3R 28626211 28626227 chr3R 28626292 28626299 7 88 1.5 4.5 3.0 1.8 88 chr3R 28626211 intron CG10011 - chr3R 28626255 intron CG10011 - chr3R 28626299 intron CG10011 - chr3R_7_28625001 chr3R_28625001 RAL-367 1271 chr3R 28763902 28763918 chr3R 28771345 28771361 Stalker4 5 7443 0.0 1.5 0.8 2.8 7459 chr3R 28763902 intergenic not near genes chr3R 28767632 intergenic not near genes chr3R 28771361 intergenic not near genes chr3R_5_28765001 chr3R_28765001 RAL-367 1272 chr3R 28792880 28792891 chr3R 28797969 28797986 jockey 4 5094 6.0 2.5 4.2 0.8 5106 chr3R 28792880 intergenic not near genes chr3R 28795433 intergenic not near genes chr3R 28797986 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-367 1273 chr3R 21907534 21907536 chr3R 28831799 28831801 33 6924266 17.5 13.0 15.2 2.0 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_33_25365001 chr3R_25365001 RAL-367 1274 chr3R 21907534 21907536 chr3R 28831802 28831802 37 6924267 17.5 12.5 15.0 2.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_37_25365001 chr3R_25365001 RAL-367 1275 chr3R 28998989 28999016 chr3R 28999081 28999108 6 92 4.0 0.0 2.0 2.0 119 chr3R 28998989 intron wat - chr3R 28999048 intron wat - chr3R 28999108 intron wat - chr3R_6_28995001 chr3R_28995001 RAL-367 1276 chr3R 29009955 29009980 chr3R 29010061 29010086 8 106 1.0 2.0 1.5 3.2 131 chr3R 29009955 intron wat - chr3R 29010020 intron wat - chr3R 29010086 intron wat - chr3R_8_29010001 chr3R_29010001 RAL-367 1277 chr3R 21907534 21907536 chr3R 29013340 29013340 12 7105806 17.5 5.0 11.2 1.0 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_12_25460001 chr3R_25460001 RAL-367 1278 chr3R 29032745 29032777 chr3R 29032822 29032833 6 74 2.0 0.0 1.0 3.0 88 chr3R 29032745 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032789 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032833 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_6_29030001 chr3R_29030001 RAL-367 1279 chr3R 29053744 29053763 chr3R 29054254 29054273 7 510 2.5 3.5 3.0 1.8 529 chr3R 29053744 exon CG11842 + chr3R 29054008 intergenic CG11842 +,CG11843 + chr3R 29054273 intergenic CG11843 +,CG11842 + chr3R_7_29050001 chr3R_29050001 RAL-367 1280 chr3R 29213060 29213090 chr3R 29213143 29213173 14 81 2.5 3.5 3.0 3.5 113 chr3R 29213060 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213173 intergenic not near genes chr3R_14_29210001 chr3R_29210001 RAL-367 1281 chr3R 29237252 29237281 chr3R 29239273 29239292 7 2019 2.0 6.5 4.2 1.3 2040 chr3R 29237252 exon CG11951 - chr3R 29238272 intron CG11951 - chr3R 29239292 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-367 1282 chr3R 29240313 29240340 chr3R 29240397 29240424 6 84 0.5 0.0 0.2 5.0 111 chr3R 29240313 5` UTR CG31427 - chr3R 29240368 intergenic CG31427 -,CG31445 - chr3R 29240424 intergenic CG31427 -,CG31445 - chr3R_6_29240001 chr3R_29240001 RAL-367 1283 chr3R 29256269 29256300 chr3R 29256349 29256380 9 80 2.0 3.0 2.5 2.6 111 chr3R 29256269 intergenic CG45544 +,stg - chr3R 29256324 intergenic CG45544 + chr3R 29256380 intergenic CG45544 + chr3R_9_29255001 chr3R_29255001 RAL-367 1284 chr3R 29356065 29356079 chr3R 29356146 29356160 6 79 0.0 4.0 2.0 2.0 95 chr3R 29356065 intergenic CR45547 - chr3R 29356112 intergenic CR45547 - chr3R 29356160 3` UTR CR45547 - chr3R_6_29355001 chr3R_29355001 RAL-367 1285 chr3R 29406624 29406647 chr3R 29407910 29407933 jockey 9 1286 1.5 4.0 2.8 2.4 1309 chr3R 29406624 intron Ptp99A + chr3R 29407278 intron Ptp99A + chr3R 29407933 intron Ptp99A + chr3R_9_29405001 chr3R_29405001 RAL-367 1286 chr3R 29430382 29430406 chr3R 29430488 29430512 7 106 2.0 1.5 1.8 2.5 130 chr3R 29430382 intron Ptp99A + chr3R 29430447 intron Ptp99A + chr3R 29430512 intron Ptp99A + chr3R_7_29430001 chr3R_29430001 RAL-367 1287 chr3R 29447818 29447849 chr3R 29447925 29447956 8 107 2.5 1.0 1.8 2.9 138 chr3R 29447818 intron Ptp99A + chr3R 29447887 intron Ptp99A + chr3R 29447956 intron Ptp99A + chr3R_8_29445001 chr3R_29445001 RAL-367 1288 chr3R 29472015 29472032 chr3R 29472108 29472125 8 91 3.5 4.5 4.0 1.6 110 chr3R 29472015 intron Ptp99A + chr3R 29472070 intron Ptp99A + chr3R 29472125 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-367 1289 chr3R 29550262 29550272 chr3R 29550343 29550351 4 80 2.5 5.0 3.8 0.8 89 chr3R 29550262 intergenic not near genes chr3R 29550306 intergenic not near genes chr3R 29550351 intergenic not near genes chr3R_4_29550001 chr3R_29550001 RAL-367 1290 chr3R 29590377 29590400 chr3R 29590470 29590493 11 93 1.0 2.5 1.8 3.9 116 chr3R 29590377 intron CG31041 - chr3R 29590435 intron CG31041 - chr3R 29590493 intron CG31041 - chr3R_11_29590001 chr3R_29590001 RAL-367 1291 chr3R 29645829 29645857 chr3R 29645910 29645938 6 78 0.5 4.5 2.5 1.7 109 chr3R 29645829 intron Dop1R2 - chr3R 29645884 intron Dop1R2 - chr3R 29645938 intron Dop1R2 - chr3R_6_29645001 chr3R_29645001 RAL-367 1292 chr3R 29655652 29655678 chr3R 29655731 29655757 4 79 2.0 1.0 1.5 1.6 105 chr3R 29655652 intron Dop1R2 - chr3R 29655704 intron Dop1R2 - chr3R 29655757 intron Dop1R2 - chr3R_4_29655001 chr3R_29655001 RAL-367 1293 chr3R 29719401 29719426 chr3R 29719487 29719512 7 86 4.0 3.0 3.5 1.6 111 chr3R 29719401 intron CG15506 + chr3R 29719456 intron CG15506 + chr3R 29719512 intron CG15506 + chr3R_7_29715001 chr3R_29715001 RAL-367 1294 chr3R 29738266 29738297 chr3R 29739733 29739760 hobo 8 1465 2.0 4.0 3.0 2.0 1494 chr3R 29738266 intergenic CG1969 +,CG7598 + chr3R 29739013 intron CG1969 + chr3R 29739760 5` UTR CG1969 + chr3R_8_29735001 chr3R_29735001 RAL-367 1295 chr3R 29759103 29759108 chr3R 29759522 29759527 4 419 0.0 0.0 0.0 4.0 424 chr3R 29759103 intergenic CR44953 - chr3R 29759315 intergenic CR44953 - chr3R 29759527 intergenic CR44953 - chr3R_4_29755001 chr3R_29755001 RAL-367 1296 chr3R 29880582 29880618 chr3R 29880667 29880702 11 83 4.0 1.5 2.8 2.9 120 chr3R 29880582 intron CG31038 + chr3R 29880642 intron CG31038 + chr3R 29880702 intron CG31038 + chr3R_11_29880001 chr3R_29880001 RAL-367 1297 chr3R 30032164 30032173 chr3R 30032243 30032252 4 79 1.5 4.0 2.8 1.1 88 chr3R 30032164 intron Axn + chr3R 30032208 intron Axn + chr3R 30032252 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-367 1298 chr3R 30084851 30084877 chr3R 30086318 30086344 hobo 15 1465 5.0 3.5 4.2 2.9 1493 chr3R 30084851 intron sima + chr3R 30085598 intron sima + chr3R 30086344 intron sima + chr3R_15_30085001 chr3R_30085001 RAL-367 1299 chr3R 30136964 30136980 chr3R 30137043 30137059 9 78 2.0 4.0 3.0 2.2 95 chr3R 30136964 exon AdoR - chr3R 30137012 intron AdoR - chr3R 30137059 intron AdoR - chr3R_9_30135001 chr3R_30135001 RAL-367 1300 chr3R 30268000 30268262 chr3R 30268066 30268341 7 78 4.0 3.5 3.8 1.5 341 chr3R 30268000 intergenic not near genes chr3R 30268170 intergenic not near genes chr3R 30268341 intergenic not near genes chr3R_7_30265001 chr3R_30265001 RAL-367 1301 chr3R 30289121 30289144 chr3R 30289211 30289234 8 89 0.0 2.0 1.0 4.0 113 chr3R 30289121 intron hdc + chr3R 30289178 intron hdc + chr3R 30289234 intron hdc + chr3R_8_30285001 chr3R_30285001 RAL-367 1302 chr3R 30317338 30317358 chr3R 30324930 30324950 roo 5 7592 0.0 3.0 1.5 2.0 7612 chr3R 30317338 intron hdc + chr3R 30321144 intron hdc + chr3R 30324950 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-367 1303 chr3R 30330515 30330523 chr3R 30330590 30330603 4 79 4.0 4.0 4.0 0.8 88 chr3R 30330515 intron hdc + chr3R 30330559 intron hdc + chr3R 30330603 intron hdc + chr3R_4_30330001 chr3R_30330001 RAL-367 1304 chr3R 30354725 30354753 chr3R 30354810 30354833 8 82 3.5 2.0 2.8 2.1 108 chr3R 30354725 intron hdc + chr3R 30354779 intron hdc + chr3R 30354833 intron hdc + chr3R_8_30350001 chr3R_30350001 RAL-367 1305 chr3R 30375548 30375568 chr3R 30383173 30383183 412 4 7622 2.0 3.5 2.8 1.1 7635 chr3R 30375548 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383183 intergenic not near genes chr3R_4_30375001 chr3R_30375001 RAL-367 1306 chr3R 30396230 30396246 chr3R 30404496 30404512 roo 4 8266 1.5 3.5 2.5 1.1 8282 chr3R 30396230 intergenic not near genes chr3R 30400371 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_4_30400001 chr3R_30400001 RAL-367 1307 chr3R 30480473 30480509 chr3R 30482941 30482977 jockey 17 2466 1.5 3.5 2.5 4.9 2504 chr3R 30480473 intron PH4alphaEFB + chr3R 30481725 intron PH4alphaEFB + chr3R 30482977 intron PH4alphaEFB + chr3R_17_30480001 chr3R_30480001 RAL-367 1308 chr3R 30498410 30498429 chr3R 30498610 30498629 4 200 0.0 1.5 0.8 2.2 219 chr3R 30498410 intron PH4alphaNE1 - chr3R 30498520 intron PH4alphaNE1 - chr3R 30498629 intron PH4alphaNE1 - chr3R_4_30495001 chr3R_30495001 RAL-367 1309 chr3R 30571699 30571713 chr3R 30571779 30571793 5 80 0.5 2.0 1.2 2.3 94 chr3R 30571699 intron tmod + chr3R 30571746 intron tmod + chr3R 30571793 intron tmod + chr3R_5_30570001 chr3R_30570001 RAL-367 1310 chr3R 30592506 30592535 chr3R 30592616 30592645 9 110 2.0 2.5 2.2 2.8 139 chr3R 30592506 intergenic CG2246 - chr3R 30592576 intergenic CG2246 - chr3R 30592645 intergenic CG2246 - chr3R_9_30590001 chr3R_30590001 RAL-367 1311 chr3R 30627601 30627635 chr3R 30627681 30627715 10 80 1.0 3.0 2.0 3.3 114 chr3R 30627601 3` UTR CG2267 - chr3R 30627658 exon CG2267 - chr3R 30627715 exon CG2267 - chr3R_10_30625001 chr3R_30625001 RAL-367 1312 chr3R 30679533 30679551 chr3R 30687002 30687020 blood 5 7469 3.0 5.5 4.2 1.0 7487 chr3R 30679533 intergenic not near genes chr3R 30683276 intergenic not near genes chr3R 30687020 intergenic not near genes chr3R_5_30680001 chr3R_30680001 RAL-367 1313 chr3R 30952632 30952650 chr3R 30954019 30954037 5 1387 0.5 2.5 1.5 2.0 1405 chr3R 30952632 intergenic not near genes chr3R 30953334 intergenic not near genes chr3R 30954037 intergenic not near genes chr3R_5_30950001 chr3R_30950001 RAL-367 1314 chr3R 30973149 30973167 chr3R 30973310 30973328 6 161 0.5 6.0 3.2 1.4 179 chr3R 30973149 intron 5-HT7 - chr3R 30973238 intron 5-HT7 - chr3R 30973328 intron 5-HT7 - chr3R_6_30970001 chr3R_30970001 RAL-367 1315 chr3R 31137154 31137171 chr3R 31137234 31137251 4 80 1.0 0.5 0.8 2.2 97 chr3R 31137154 intron Gycbeta100B + chr3R 31137202 intron Gycbeta100B + chr3R 31137251 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-367 1316 chr3R 31279373 31279396 chr3R 31285564 31285587 diver 7 6191 5.5 2.0 3.8 1.5 6214 chr3R 31279373 intergenic not near genes chr3R 31282480 intergenic not near genes chr3R 31285587 intergenic not near genes chr3R_7_31280001 chr3R_31280001 RAL-367 1317 chr3R 31295359 31295379 chr3R 31295445 31295465 6 86 1.0 2.5 1.8 2.1 106 chr3R 31295359 intergenic not near genes chr3R 31295412 intergenic not near genes chr3R 31295465 intergenic not near genes chr3R_6_31295001 chr3R_31295001 RAL-367 1318 chr3R 31412714 31412740 chr3R 31412807 31412833 8 93 1.5 2.5 2.0 2.7 119 chr3R 31412714 intron Gprk2 + chr3R 31412774 intron Gprk2 + chr3R 31412833 intron Gprk2 + chr3R_8_31410001 chr3R_31410001 RAL-367 1319 chr3R 31413088 31413120 chr3R 31418288 31418318 copia 6 5199 1.5 0.5 1.0 3.0 5230 chr3R 31413088 intron Gprk2 + chr3R 31415703 intron Gprk2 + chr3R 31418318 intron Gprk2 + chr3R_6_31415001 chr3R_31415001 RAL-367 1320 chr3R 31426885 31426912 chr3R 31426977 31427004 7 92 2.0 3.0 2.5 2.0 119 chr3R 31426885 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427004 intron Gprk2 + chr3R_7_31425001 chr3R_31425001 RAL-367 1321 chr3R 31691533 31691558 chr3R 31696299 31696324 Doc 14 4765 3.0 6.0 4.5 2.5 4791 chr3R 31691533 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696324 intergenic not near genes chr3R_14_31690001 chr3R_31690001 RAL-367 1322 chr3R 31768865 31768897 chr3R 31769146 31769178 12 281 29.0 28.5 28.8 0.4 313 chr3R 31768865 5` UTR pncr017:3R + chr3R 31769022 5` UTR pncr017:3R + chr3R 31769178 5` UTR pncr017:3R + chr3R_12_31765001 chr3R_31765001 RAL-367 1323 chr3R 31930899 31931197 chr3R 31931010 31931280 6 97 1.5 4.0 2.8 1.6 381 chr3R 31930899 intron heph - chr3R 31931090 intron heph - chr3R 31931280 intron heph - chr3R_6_31930001 chr3R_31930001 RAL-367 1324 chr3R 31997998 31998018 chr3R 32005468 32005488 blood 5 7470 4.0 1.5 2.8 1.3 7490 chr3R 31997998 intron heph - chr3R 32001743 intron heph - chr3R 32005488 intron heph - chr3R_5_32000001 chr3R_32000001 RAL-367 1325 chr3R 32009985 32010014 chr3R 32010110 32010139 8 124 2.0 2.0 2.0 2.7 154 chr3R 32009985 intron heph - chr3R 32010062 intron heph - chr3R 32010139 intron heph - chr3R_8_32010001 chr3R_32010001 RAL-367 1326 chr4 76492 76506 chr4 81935 81949 I-element 4 5443 3.5 2.0 2.8 1.1 5457 chr4 76492 intron pan + chr4 79220 intron pan + chr4 81949 intron pan + chr4_4_75001 chr4_75001 RAL-367 1327 chr4 320000 320009 chr4 328176 328185 Stalker2 4 8176 1.5 1.5 1.5 1.6 8185 chr4 320000 3` UTR CG32850 + chr4 324092 intron CG32850 + chr4 328185 3` UTR CG32850 + chr4_4_320001 chr4_320001 RAL-367 1328 chr4 671607 671636 chr4 680190 680219 Tirant 7 8579 5.0 4.5 4.8 1.2 8612 chr4 671607 intron CG11360 + chr4 675913 intron CG11360 + chr4 680219 intron CG11360 + chr4_7_675001 chr4_675001 RAL-367 1329 chrX 447279 447300 chrX 447434 447455 7 155 2.5 1.0 1.8 2.5 176 chrX 447279 intron CG32816 - chrX 447367 intron CG32816 - chrX 447455 intron CG32816 - chrX_7_445001 chrX_445001 RAL-367 1330 chrX 450367 450393 chrX 450445 450471 4 78 1.0 1.0 1.0 2.0 104 chrX 450367 intron CG32816 - chrX 450419 intron CG32816 - chrX 450471 intron CG32816 - chrX_4_450001 chrX_450001 RAL-367 1331 chrX 551421 551453 chrX 558983 559015 412 8 7558 2.5 3.0 2.8 2.1 7594 chrX 551421 intron Appl + chrX 555218 intron Appl + chrX 559015 intron Appl + chrX_8_555001 chrX_555001 RAL-367 1332 chrX 667646 667682 chrX 667730 667766 8 84 1.0 1.0 1.0 4.0 120 chrX 667646 intergenic not near genes chrX 667706 intergenic not near genes chrX 667766 intergenic not near genes chrX_8_665001 chrX_665001 RAL-367 1333 chrX 670263 670297 chrX 670343 670377 6 80 0.0 2.5 1.2 2.7 114 chrX 670263 intergenic not near genes chrX 670320 intergenic not near genes chrX 670377 intergenic not near genes chrX_6_670001 chrX_670001 RAL-367 1334 chrX 680838 680869 chrX 680921 680952 11 80 2.5 2.0 2.2 3.4 114 chrX 680838 intergenic not near genes chrX 680895 intergenic not near genes chrX 680952 intergenic not near genes chrX_11_680001 chrX_680001 RAL-367 1335 chrX 706805 706824 chrX 707169 707179 6 362 0.0 2.5 1.2 2.7 374 chrX 706805 intron sdk + chrX 706992 intron sdk + chrX 707179 intron sdk + chrX_6_705001 chrX_705001 RAL-367 1336 chrX 714788 714819 chrX 714891 714922 7 101 4.0 5.0 4.5 1.3 134 chrX 714788 intron sdk + chrX 714855 intron sdk + chrX 714922 intron sdk + chrX_7_710001 chrX_710001 RAL-367 1337 chrX 778126 778146 chrX 778216 778236 4 90 5.5 1.0 3.2 1.0 110 chrX 778126 intron fz3 + chrX 778181 intron fz3 + chrX 778236 intron fz3 + chrX_4_775001 chrX_775001 RAL-367 1338 chrX 868495 868517 chrX 868572 868576 7 74 4.0 2.5 3.2 1.7 81 chrX 868495 intron CG43867 - chrX 868536 intron CG43867 - chrX 868576 intron CG43867 - chrX_7_865001 chrX_865001 RAL-367 1339 chrX 906708 906733 chrX 908497 908522 S-element 6 1789 3.0 3.0 3.0 1.5 1814 chrX 906708 intron CG43867 - chrX 907615 intron CG43867 - chrX 908522 intron CG43867 - chrX_6_905001 chrX_905001 RAL-367 1340 chrX 1024141 1024175 chrX 1024222 1024256 5 78 2.0 0.0 1.0 2.5 115 chrX 1024141 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024198 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024256 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_5_1020001 chrX_1020001 RAL-367 1341 chrX 1053117 1053123 chrX 16983076 16983076 5 15929957 4.5 9.5 7.0 0.6 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-367 1342 chrX 1229661 1229672 chrX 1229747 1229758 5 86 5.5 3.0 4.2 1.0 97 chrX 1229661 intron CG3638 - chrX 1229710 intron CG3638 - chrX 1229758 intron CG3638 - chrX_5_1225001 chrX_1225001 RAL-367 1343 chrX 1229673 1229691 chrX 1229742 1229766 4 79 3.5 2.0 2.8 1.1 93 chrX 1229673 intron CG3638 - chrX 1229720 intron CG3638 - chrX 1229766 intron CG3638 - chrX_4_1225001 chrX_1225001 RAL-367 1344 chrX 1253729 1253762 chrX 1253811 1253843 7 79 3.0 2.0 2.5 2.0 114 chrX 1253729 intron Atf3 - chrX 1253786 intron Atf3 - chrX 1253843 intron Atf3 - chrX_7_1250001 chrX_1250001 RAL-367 1345 chrX 1357782 1357807 chrX 1367946 1367977 Doc 7 10169 2.5 1.0 1.8 2.5 10195 chrX 1357782 intergenic png - chrX 1362880 intergenic not near genes chrX 1367977 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-367 1346 chrX 1518041 1518074 chrX 1523439 1523475 jockey 8 5399 3.0 3.5 3.2 1.9 5434 chrX 1518041 intergenic inc + chrX 1520758 intergenic not near genes chrX 1523475 intergenic not near genes chrX_8_1520001 chrX_1520001 RAL-367 1347 chrX 1560655 1560688 chrX 1560747 1560781 4 92 1.0 1.0 1.0 2.0 126 chrX 1560655 intron Mur2B - chrX 1560718 intron Mur2B - chrX 1560781 intron Mur2B - chrX_4_1560001 chrX_1560001 RAL-367 1348 chrX 1627975 1627996 chrX 1635443 1635464 gtwin 4 7468 4.5 2.5 3.5 0.9 7489 chrX 1627975 intron,intron Mur2B -,br + chrX 1631720 intron,intron Mur2B -,br + chrX 1635464 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-367 1349 chrX 2069369 2069402 chrX 2069469 2069502 8 99 1.5 0.0 0.8 4.4 133 chrX 2069369 intron,exon CG4199 -,CG4194 + chrX 2069436 intron,3` UTR CG4199 -,CG4194 + chrX 2069502 intron,3` UTR CG4199 -,CG4194 + chrX_8_2065001 chrX_2065001 RAL-367 1350 chrX 2399835 2399868 chrX 2408188 2408221 roo 7 8346 1.0 3.5 2.2 2.2 8386 chrX 2399835 intergenic not near genes chrX 2404028 intergenic not near genes chrX 2408221 intergenic not near genes chrX_7_2400001 chrX_2400001 RAL-367 1351 chrX 2568194 2568229 chrX 2568442 2568472 12 248 3.0 2.5 2.8 3.2 278 chrX 2568194 intron Pdfr + chrX 2568333 intron Pdfr + chrX 2568472 intron Pdfr + chrX_12_2565001 chrX_2565001 RAL-367 1352 chrX 2578826 2578836 chrX 2578922 2578940 4 102 3.5 2.0 2.8 1.1 114 chrX 2578826 intergenic Pdfr +,Vha36-3 - chrX 2578883 intergenic Vha36-3 -,Pdfr + chrX 2578940 intergenic Vha36-3 -,Pdfr + chrX_4_2575001 chrX_2575001 RAL-367 1353 chrX 2592686 2592718 chrX 2593149 2593181 9 462 3.5 3.0 3.2 2.1 495 chrX 2592686 intron egh + chrX 2592934 intron egh + chrX 2593181 intron egh + chrX_9_2590001 chrX_2590001 RAL-367 1354 chrX 2635372 2635400 chrX 2635481 2635509 10 109 1.0 3.5 2.2 3.1 137 chrX 2635372 intron sgg + chrX 2635440 intron sgg + chrX 2635509 intron sgg + chrX_10_2635001 chrX_2635001 RAL-367 1355 chrX 2664387 2664420 chrX 2665528 2665566 1360 5 1145 0.0 1.5 0.8 2.8 1179 chrX 2664387 intron sgg + chrX 2664976 intron sgg + chrX 2665566 intron sgg + chrX_5_2660001 chrX_2660001 RAL-367 1356 chrX 2880042 2880067 chrX 2880128 2880153 9 86 3.5 2.5 3.0 2.2 111 chrX 2880042 intron kirre + chrX 2880098 intron kirre + chrX 2880153 intron kirre + chrX_9_2880001 chrX_2880001 RAL-367 1357 chrX 2888121 2888147 chrX 2888199 2888225 5 78 0.0 4.5 2.2 1.6 104 chrX 2888121 intron kirre + chrX 2888173 intron kirre + chrX 2888225 intron kirre + chrX_5_2885001 chrX_2885001 RAL-367 1358 chrX 3067937 3067964 chrX 3068026 3068053 7 87 2.0 2.5 2.2 2.2 116 chrX 3067937 intron kirre + chrX 3067995 intron kirre + chrX 3068053 intron kirre + chrX_7_3065001 chrX_3065001 RAL-367 1359 chrX 3306344 3306355 chrX 3306426 3306437 6 82 2.5 0.0 1.2 2.7 93 chrX 3306344 intron dnc + chrX 3306390 intron dnc + chrX 3306437 intron dnc + chrX_6_3305001 chrX_3305001 RAL-367 1360 chrX 3415036 3415045 chrX 3421221 3421230 3S18 5 6185 3.5 1.0 2.2 1.6 6194 chrX 3415036 intron,intron CR44999 +,CG12535 - chrX 3418133 intron,intron CR44999 +,CG12535 - chrX 3421230 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 RAL-367 1361 chrX 3493095 3493112 chrX 3502248 3502269 roo 5 9155 2.5 1.5 2.0 1.7 9174 chrX 3493095 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502269 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-367 1362 chrX 3597555 3597564 chrX 3619723 3619732 roo 5 22168 3.5 1.5 2.5 1.4 22177 chrX 3597555 intron AstA-R1 + chrX 3608644 intron AstA-R1 + chrX 3619732 intron AstA-R1 + chrX_5_3605001 chrX_3605001 RAL-367 1363 chrX 3726765 3726792 chrX 3730158 3730189 NOF 4 3394 2.5 1.0 1.8 1.4 3424 chrX 3726765 intron tlk + chrX 3728477 intron tlk + chrX 3730189 intron tlk + chrX_4_3725001 chrX_3725001 RAL-367 1364 chrX 3842327 3842347 chrX 3842568 3842588 pogo 4 241 2.5 1.0 1.8 1.4 261 chrX 3842327 intron ec + chrX 3842458 intron ec + chrX 3842588 intron ec + chrX_4_3840001 chrX_3840001 RAL-367 1365 chrX 3866107 3866135 chrX 3866185 3866213 4 78 1.0 0.5 0.8 2.2 106 chrX 3866107 intron yin - chrX 3866160 intron yin - chrX 3866213 intron yin - chrX_4_3865001 chrX_3865001 RAL-367 1366 chrX 3891149 3891169 chrX 3891267 3891287 4 118 5.0 2.5 3.8 0.8 138 chrX 3891149 intergenic CG42541 - chrX 3891218 intergenic CG42541 - chrX 3891287 intergenic CG42541 - chrX_4_3890001 chrX_3890001 RAL-367 1367 chrX 4101884 4101900 chrX 4101964 4101980 8 79 0.5 4.5 2.5 2.3 96 chrX 4101884 exon CG15375 + chrX 4101932 exon CG15375 + chrX 4101980 exon CG15375 + chrX_8_4100001 chrX_4100001 RAL-367 1368 chrX 4267326 4267340 chrX 4267406 4267420 6 79 3.0 3.0 3.0 1.5 94 chrX 4267326 intergenic not near genes chrX 4267373 intergenic not near genes chrX 4267420 intergenic not near genes chrX_6_4265001 chrX_4265001 RAL-367 1369 chrX 4282177 4282198 chrX 4282494 4282515 8 317 3.5 2.0 2.8 2.1 338 chrX 4282177 intergenic not near genes chrX 4282346 intergenic not near genes chrX 4282515 intergenic not near genes chrX_8_4280001 chrX_4280001 RAL-367 1370 chrX 4396976 4397007 chrX 4397061 4397091 5 85 2.0 1.5 1.8 1.8 115 chrX 4396976 intron CR32773 - chrX 4397034 intron CR32773 - chrX 4397091 intron CR32773 - chrX_5_4395001 chrX_4395001 RAL-367 1371 chrX 4717359 4717385 chrX 4717880 4717906 6 521 0.5 3.5 2.0 2.0 547 chrX 4717359 intron Proc-R + chrX 4717632 intron Proc-R + chrX 4717906 intron Proc-R + chrX_6_4715001 chrX_4715001 RAL-367 1372 chrX 4731815 4731834 chrX 4736908 4736922 jockey 6 5092 3.0 0.0 1.5 2.4 5107 chrX 4731815 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736922 intergenic not near genes chrX_6_4730001 chrX_4730001 RAL-367 1373 chrX 4759396 4759403 chrX 4759472 4759479 4 76 1.0 3.0 2.0 1.3 83 chrX 4759396 intergenic not near genes chrX 4759438 intergenic not near genes chrX 4759479 intergenic not near genes chrX_4_4755001 chrX_4755001 RAL-367 1374 chrX 4763269 4763281 chrX 4763757 4763769 Stalker4 4 488 3.0 2.0 2.5 1.1 500 chrX 4763269 intergenic not near genes chrX 4763519 intergenic not near genes chrX 4763769 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-367 1375 chrX 4827974 4827994 chrX 4835340 4835365 Stalker4 4 7370 1.0 2.0 1.5 1.6 7391 chrX 4827974 intergenic not near genes chrX 4831670 intergenic not near genes chrX 4835365 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-367 1376 chrX 4864165 4864179 chrX 4864243 4864257 4 78 3.0 5.5 4.2 0.8 92 chrX 4864165 intron CG42594 + chrX 4864211 intron CG42594 + chrX 4864257 intron CG42594 + chrX_4_4860001 chrX_4860001 RAL-367 1377 chrX 5134795 5134828 chrX 5134896 5134929 8 100 2.0 3.0 2.5 2.3 134 chrX 5134795 intron,intron CG15465 +,rg + chrX 5134862 intron,intron CG15465 +,rg + chrX 5134929 intron,intron CG15465 +,rg + chrX_8_5130001 chrX_5130001 RAL-367 1378 chrX 5220390 5220411 chrX 5220631 5220652 6 241 0.0 2.5 1.2 2.7 262 chrX 5220390 intron,intron CG15465 +,rg + chrX 5220521 intron,intron CG15465 +,rg + chrX 5220652 intron,intron CG15465 +,rg + chrX_6_5220001 chrX_5220001 RAL-367 1379 chrX 5441986 5442015 chrX 5442094 5442123 4 107 1.0 2.5 1.8 1.4 137 chrX 5441986 intergenic not near genes chrX 5442054 intergenic not near genes chrX 5442123 intergenic not near genes chrX_4_5440001 chrX_5440001 RAL-367 1380 chrX 5469797 5469808 chrX 5474463 5474474 4 4666 12.0 6.0 9.0 0.4 4677 chrX 5469797 intron SPR + chrX 5472136 intron SPR + chrX 5474474 intron SPR + chrX_4_5470001 chrX_5470001 RAL-367 1381 chrX 5481071 5481091 chrX 5485039 5485059 I-element 5 3968 0.0 0.5 0.2 4.2 3988 chrX 5481071 intron SPR + chrX 5483065 intron SPR + chrX 5485059 intron SPR + chrX_5_5480001 chrX_5480001 RAL-367 1382 chrX 5512053 5512060 chrX 5512136 5512143 4 83 4.0 0.0 2.0 1.3 90 chrX 5512053 intergenic not near genes chrX 5512098 intergenic not near genes chrX 5512143 intergenic not near genes chrX_4_5510001 chrX_5510001 RAL-367 1383 chrX 5796916 5796943 chrX 5796984 5797022 6 72 0.5 1.5 1.0 3.0 106 chrX 5796916 intergenic not near genes chrX 5796969 intergenic not near genes chrX 5797022 intergenic not near genes chrX_6_5795001 chrX_5795001 RAL-367 1384 chrX 6013549 6013569 chrX 6013747 6013767 10 200 19.5 20.0 19.8 0.5 218 chrX 6013549 intergenic CR44499 +,mab-21 - chrX 6013658 intergenic CR44499 +,mab-21 - chrX 6013767 5` UTR CR44499 + chrX_10_6010001 chrX_6010001 RAL-367 1385 chrX 6171581 6171609 chrX 6179014 6179042 Quasimodo 7 7433 3.0 1.5 2.2 2.2 7461 chrX 6171581 intron Ca-alpha1T - chrX 6175312 intron Ca-alpha1T - chrX 6179042 intron Ca-alpha1T - chrX_7_6175001 chrX_6175001 RAL-367 1386 chrX 6215346 6215371 chrX 6215429 6215454 7 83 1.0 2.0 1.5 2.8 108 chrX 6215346 intergenic not near genes chrX 6215400 intergenic not near genes chrX 6215454 intergenic not near genes chrX_7_6215001 chrX_6215001 RAL-367 1387 chrX 6392873 6392896 chrX 6397638 6397661 Doc 6 4765 1.5 3.5 2.5 1.7 4788 chrX 6392873 intergenic not near genes chrX 6395267 intergenic not near genes chrX 6397661 intergenic not near genes chrX_6_6395001 chrX_6395001 RAL-367 1388 chrX 6605485 6605504 chrX 6608507 6608526 Burdock 7 3022 1.5 2.0 1.8 2.5 3041 chrX 6605485 intron pigs + chrX 6607006 intron pigs + chrX 6608526 intron pigs + chrX_7_6605001 chrX_6605001 RAL-367 1389 chrX 6897587 6897704 chrX 6897665 6897814 5 104 2.5 2.5 2.5 1.4 227 chrX 6897587 intergenic not near genes chrX 6897700 intergenic not near genes chrX 6897814 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-367 1390 chrX 7023616 7023628 chrX 7031006 7031018 Tabor 4 7390 4.0 2.0 3.0 1.0 7402 chrX 7023616 intron CG12541 - chrX 7027317 intron CG12541 - chrX 7031018 intron CG12541 - chrX_4_7025001 chrX_7025001 RAL-367 1391 chrX 7125247 7125279 chrX 7134406 7134438 roo 6 9159 0.5 5.5 3.0 1.5 9191 chrX 7125247 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134438 intergenic not near genes chrX_6_7125001 chrX_7125001 RAL-367 1392 chrX 7424355 7424371 chrX 7424428 7424457 4 82 2.0 1.0 1.5 1.6 102 chrX 7424355 intergenic CG15036 - chrX 7424406 intergenic CG15036 - chrX 7424457 intergenic CG15036 - chrX_4_7420001 chrX_7420001 RAL-367 1393 chrX 7570633 7570668 chrX 7570767 7570802 7 134 0.0 1.0 0.5 4.7 169 chrX 7570633 intergenic not near genes chrX 7570718 intergenic not near genes chrX 7570802 intergenic not near genes chrX_7_7570001 chrX_7570001 RAL-367 1394 chrX 7702509 7702523 chrX 7702601 7702615 5 92 0.0 2.0 1.0 2.5 106 chrX 7702509 intron CHES-1-like - chrX 7702562 intron CHES-1-like - chrX 7702615 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-367 1395 chrX 7702928 7702936 chrX 7703336 7703375 jockey 5 432 1.0 0.5 0.8 2.8 447 chrX 7702928 intron CHES-1-like - chrX 7703152 intron CHES-1-like - chrX 7703375 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-367 1396 chrX 8063758 8063768 chrX 8063854 8063865 5 96 0.5 2.5 1.5 2.0 107 chrX 8063758 intron mys + chrX 8063812 intron mys + chrX 8063865 5` UTR mys + chrX_5_8060001 chrX_8060001 RAL-367 1397 chrX 8371156 8371163 chrX 8371315 8371325 4 159 3.0 0.0 1.5 1.6 169 chrX 8371156 intergenic not near genes chrX 8371240 intergenic not near genes chrX 8371325 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-367 1398 chrX 8708698 8708714 chrX 8708881 8708897 4 183 7.5 5.0 6.2 0.6 199 chrX 8708698 intergenic not near genes chrX 8708798 intergenic not near genes chrX 8708897 intergenic not near genes chrX_4_8705001 chrX_8705001 RAL-367 1399 chrX 8856941 8856974 chrX 8857060 8857093 7 119 1.5 0.5 1.0 3.5 152 chrX 8856941 intron CG12075 + chrX 8857017 intron CG12075 + chrX 8857093 intron CG12075 + chrX_7_8855001 chrX_8855001 RAL-367 1400 chrX 8877780 8877800 chrX 8877904 8877924 4 124 3.0 0.0 1.5 1.6 144 chrX 8877780 intron Moe - chrX 8877852 intron Moe - chrX 8877924 intron Moe - chrX_4_8875001 chrX_8875001 RAL-367 1401 chrX 8894103 8894125 chrX 8894204 8894226 6 101 2.0 2.5 2.2 1.9 123 chrX 8894103 intron Moe - chrX 8894164 intron Moe - chrX 8894226 intron Moe - chrX_6_8890001 chrX_8890001 RAL-367 1402 chrX 8922326 8922361 chrX 8922760 8922795 jockey 8 431 2.5 4.0 3.2 1.9 469 chrX 8922326 intron rdgA + chrX 8922560 intron rdgA + chrX 8922795 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-367 1403 chrX 9062721 9062757 chrX 9062799 9062835 4 78 1.0 0.5 0.8 2.2 114 chrX 9062721 intron CG15365 - chrX 9062778 intron CG15365 - chrX 9062835 intron CG15365 - chrX_4_9060001 chrX_9060001 RAL-367 1404 chrX 9448320 9448342 chrX 9448527 9448549 5 207 3.0 2.0 2.5 1.4 229 chrX 9448320 intron mgl - chrX 9448434 intron mgl - chrX 9448549 intron mgl - chrX_5_9445001 chrX_9445001 RAL-367 1405 chrX 9508135 9508167 chrX 9509653 9509685 jockey 5 1518 1.0 1.0 1.0 2.5 1550 chrX 9508135 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509685 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-367 1406 chrX 9575802 9575820 chrX 9576126 9576144 mdg3 5 324 4.0 4.0 4.0 1.0 342 chrX 9575802 intron,exon CG32699 -,CG42395 - chrX 9575973 intron,intron CG32699 -,CG42395 - chrX 9576144 intron,5` UTR CG32699 -,CG42395 - chrX_5_9575001 chrX_9575001 RAL-367 1407 chrX 9784179 9784203 chrX 9784367 9784391 5 188 2.5 2.5 2.5 1.4 212 chrX 9784179 intron CG32698 + chrX 9784285 intron CG32698 + chrX 9784391 intron CG32698 + chrX_5_9780001 chrX_9780001 RAL-367 1408 chrX 9854705 9854726 chrX 9854800 9854822 4 95 1.5 2.0 1.8 1.4 117 chrX 9854705 intergenic not near genes chrX 9854764 intergenic not near genes chrX 9854822 intergenic not near genes chrX_4_9850001 chrX_9850001 RAL-367 1409 chrX 9923396 9923421 chrX 9923487 9923512 9 90 0.5 3.5 2.0 3.0 116 chrX 9923396 intergenic not near genes chrX 9923454 intergenic not near genes chrX 9923512 intergenic not near genes chrX_9_9920001 chrX_9920001 RAL-367 1410 chrX 10151925 10151938 chrX 10152002 10152015 4 77 3.0 5.5 4.2 0.8 90 chrX 10151925 intron CR44894 - chrX 10151970 intron CR44894 - chrX 10152015 intron CR44894 - chrX_4_10150001 chrX_10150001 RAL-367 1411 chrX 10285894 10285907 chrX 10286230 10286243 4 336 2.5 1.0 1.8 1.4 349 chrX 10285894 intron alpha-Man-I - chrX 10286068 intron alpha-Man-I - chrX 10286243 intron alpha-Man-I - chrX_4_10285001 chrX_10285001 RAL-367 1412 chrX 10550862 10550887 chrX 10552328 10552354 hobo 6 1465 3.0 1.5 2.2 1.9 1492 chrX 10550862 intron spri - chrX 10551608 intron spri - chrX 10552354 intron spri - chrX_6_10550001 chrX_10550001 RAL-367 1413 chrX 10686068 10686076 chrX 10691205 10691211 roo 5 5137 1.0 3.0 2.0 1.7 5143 chrX 10686068 intron X11Lbeta + chrX 10688640 intron X11Lbeta + chrX 10691211 intron X11Lbeta + chrX_5_10685001 chrX_10685001 RAL-367 1414 chrX 10694152 10694181 chrX 10694232 10694261 7 80 3.5 2.0 2.8 1.8 109 chrX 10694152 intron X11Lbeta + chrX 10694206 intron X11Lbeta + chrX 10694261 intron X11Lbeta + chrX_7_10690001 chrX_10690001 RAL-367 1415 chrX 10719131 10719151 chrX 10719215 10719234 4 84 0.0 1.0 0.5 2.7 103 chrX 10719131 intron CG32676 - chrX 10719182 intron CG32676 - chrX 10719234 intron CG32676 - chrX_4_10715001 chrX_10715001 RAL-367 1416 chrX 11167770 11167793 chrX 11167867 11167890 5 96 2.5 0.5 1.5 2.0 120 chrX 11167770 intergenic antdh - chrX 11167830 intergenic antdh - chrX 11167890 intergenic antdh - chrX_5_11165001 chrX_11165001 RAL-367 1417 chrX 11291693 11291714 chrX 11291775 11291796 4 82 3.0 3.0 3.0 1.0 103 chrX 11291693 intron CG44422 - chrX 11291744 intron CG44422 - chrX 11291796 intron CG44422 - chrX_4_11290001 chrX_11290001 RAL-367 1418 chrX 11312055 11312087 chrX 11319408 11319425 Stalker2 4 7349 1.0 1.0 1.0 2.0 7370 chrX 11312055 intergenic not near genes chrX 11315740 intergenic not near genes chrX 11319425 intergenic not near genes chrX_4_11315001 chrX_11315001 RAL-367 1419 chrX 11633418 11633440 chrX 11640472 11640494 297 6 7053 3.0 1.5 2.2 1.9 7076 chrX 11633418 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640494 intron Ptp10D + chrX_6_11635001 chrX_11635001 RAL-367 1420 chrX 11684874 11684899 chrX 11685000 11685025 6 126 1.5 0.0 0.8 3.3 151 chrX 11684874 intron bif + chrX 11684950 intron bif + chrX 11685025 intron bif + chrX_6_11680001 chrX_11680001 RAL-367 1421 chrX 11719870 11719897 chrX 11719950 11719977 4 80 0.0 0.5 0.2 3.3 107 chrX 11719870 3` UTR prtp + chrX 11719924 intergenic prtp +,Tango10 + chrX 11719977 intergenic prtp +,Tango10 + chrX_4_11715001 chrX_11715001 RAL-367 1422 chrX 11799016 11799037 chrX 11799102 11799122 4 86 1.0 0.5 0.8 2.2 106 chrX 11799016 intron CkIIbeta + chrX 11799069 intron CkIIbeta + chrX 11799122 intron CkIIbeta + chrX_4_11795001 chrX_11795001 RAL-367 1423 chrX 11886454 11886474 chrX 11886561 11886584 10 109 2.0 1.5 1.8 3.6 130 chrX 11886454 intron CG10353 - chrX 11886519 intron CG10353 - chrX 11886584 intron CG10353 - chrX_10_11885001 chrX_11885001 RAL-367 1424 chrX 11922363 11922375 chrX 11922496 11922508 4 133 2.0 1.5 1.8 1.4 145 chrX 11922363 exon Sclp - chrX 11922436 intron Sclp - chrX 11922508 intron Sclp - chrX_4_11920001 chrX_11920001 RAL-367 1425 chrX 11936570 11936585 chrX 11936669 11936684 6 99 0.5 2.0 1.2 2.7 114 chrX 11936570 intron cac - chrX 11936627 intron cac - chrX 11936684 intron cac - chrX_6_11935001 chrX_11935001 RAL-367 1426 chrX 12094041 12094064 chrX 12094133 12094156 5 92 1.5 1.0 1.2 2.3 115 chrX 12094041 intron,intron CR43960 +,Ten-a + chrX 12094098 intron,intron CR43960 +,Ten-a + chrX 12094156 intron,intron CR43960 +,Ten-a + chrX_5_12090001 chrX_12090001 RAL-367 1427 chrX 12168140 12168160 chrX 12173580 12173602 I-element 6 5442 1.5 3.0 2.2 1.9 5462 chrX 12168140 intron Ten-a + chrX 12170871 intron Ten-a + chrX 12173602 intron Ten-a + chrX_6_12170001 chrX_12170001 RAL-367 1428 chrX 12176738 12176756 chrX 12176814 12176832 8 76 4.5 4.5 4.5 1.5 94 chrX 12176738 intron,3` UTR Ten-a +,CG1924 - chrX 12176785 intron,3` UTR Ten-a +,CG1924 - chrX 12176832 intron,3` UTR Ten-a +,CG1924 - chrX_8_12175001 chrX_12175001 RAL-367 1429 chrX 12176759 12176767 chrX 12176812 12176843 4 70 4.0 4.5 4.2 0.8 84 chrX 12176759 intron,3` UTR Ten-a +,CG1924 - chrX 12176801 intron,3` UTR Ten-a +,CG1924 - chrX 12176843 intron,3` UTR Ten-a +,CG1924 - chrX_4_12175001 chrX_12175001 RAL-367 1430 chrX 12212682 12212708 chrX 12212766 12212787 8 83 1.5 1.5 1.5 3.2 105 chrX 12212682 intron Ten-a + chrX 12212734 intron Ten-a + chrX 12212787 intron Ten-a + chrX_8_12210001 chrX_12210001 RAL-367 1431 chrX 12277182 12277201 chrX 12277273 12277292 4 87 4.5 2.0 3.2 1.0 110 chrX 12277182 intron Ten-a + chrX 12277237 intron Ten-a + chrX 12277292 intron Ten-a + chrX_4_12275001 chrX_12275001 RAL-367 1432 chrX 12370005 12370027 chrX 12370222 12370244 9 217 5.5 0.5 3.0 2.2 239 chrX 12370005 intergenic not near genes chrX 12370124 intergenic not near genes chrX 12370244 intergenic not near genes chrX_9_12370001 chrX_12370001 RAL-367 1433 chrX 12428346 12428381 chrX 12428458 12428487 8 111 1.5 3.0 2.2 2.5 141 chrX 12428346 intergenic not near genes chrX 12428416 intergenic not near genes chrX 12428487 intergenic not near genes chrX_8_12425001 chrX_12425001 RAL-367 1434 chrX 12557152 12557163 chrX 12557228 12557239 4 76 5.5 4.0 4.8 0.7 87 chrX 12557152 intron CG43921 - chrX 12557196 intron CG43921 - chrX 12557239 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-367 1435 chrX 12752281 12752305 chrX 12752368 12752392 9 87 3.0 2.0 2.5 2.6 111 chrX 12752281 5` UTR CR44619 + chrX 12752336 5` UTR CR44619 + chrX 12752392 5` UTR CR44619 + chrX_9_12750001 chrX_12750001 RAL-367 1436 chrX 12923130 12923164 chrX 12923243 12923277 12 113 0.5 1.5 1.0 6.0 147 chrX 12923130 intron fne + chrX 12923204 intron fne + chrX 12923277 intron fne + chrX_12_12920001 chrX_12920001 RAL-367 1437 chrX 11109417 11109417 chrX 12946233 12946234 5 1836817 1.0 1.0 1.0 2.5 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_5_12025001 chrX_12025001 RAL-367 1438 chrX 12953907 12953921 chrX 12954045 12954059 4 138 0.0 0.5 0.2 3.3 152 chrX 12953907 intron hec - chrX 12953983 intron hec - chrX 12954059 intron hec - chrX_4_12950001 chrX_12950001 RAL-367 1439 chrX 13061358 13061371 chrX 13061469 13061482 4 111 3.0 3.5 3.2 1.0 124 chrX 13061358 intron rad + chrX 13061420 intron rad + chrX 13061482 intron rad + chrX_4_13060001 chrX_13060001 RAL-367 1440 chrX 13146600 13146631 chrX 13146688 13146719 4 88 1.0 2.0 1.5 1.6 119 chrX 13146600 intron CG32645 + chrX 13146660 intron CG32645 + chrX 13146719 intron CG32645 + chrX_4_13145001 chrX_13145001 RAL-367 1441 chrX 13374849 13374862 chrX 13374929 13374942 6 80 2.5 1.5 2.0 2.0 93 chrX 13374849 intron CG1640 + chrX 13374896 intron CG1640 + chrX 13374942 intron CG1640 + chrX_6_13370001 chrX_13370001 RAL-367 1442 chrX 13429461 13429489 chrX 13430610 13430638 jockey 5 1149 3.0 2.0 2.5 1.4 1177 chrX 13429461 intergenic not near genes chrX 13430050 intergenic not near genes chrX 13430638 intergenic not near genes chrX_5_13430001 chrX_13430001 RAL-367 1443 chrX 13442141 13442168 chrX 13442232 13442259 4 91 2.0 1.0 1.5 1.6 118 chrX 13442141 intergenic not near genes chrX 13442200 intergenic not near genes chrX 13442259 intergenic not near genes chrX_4_13440001 chrX_13440001 RAL-367 1444 chrX 13546986 13547016 chrX 13547080 13547110 5 94 1.0 3.5 2.2 1.6 124 chrX 13546986 intergenic not near genes chrX 13547048 intergenic not near genes chrX 13547110 intergenic not near genes chrX_5_13545001 chrX_13545001 RAL-367 1445 chrX 13843369 13843406 chrX 13843446 13843483 5 77 1.5 1.5 1.5 2.0 114 chrX 13843369 intron AMPdeam - chrX 13843426 intron AMPdeam - chrX 13843483 intron AMPdeam - chrX_5_13840001 chrX_13840001 RAL-367 1446 chrX 13934293 13934323 chrX 13934375 13934406 4 83 0.5 1.5 1.0 2.0 113 chrX 13934293 intron mamo - chrX 13934350 intron mamo - chrX 13934406 intron mamo - chrX_4_13930001 chrX_13930001 RAL-367 1447 chrX 13975880 13975898 chrX 13975957 13975975 4 77 0.0 3.5 1.8 1.4 95 chrX 13975880 intron mamo - chrX 13975928 intron mamo - chrX 13975975 intron mamo - chrX_4_13975001 chrX_13975001 RAL-367 1448 chrX 14105020 14105055 chrX 14114171 14114203 roo 7 9150 5.0 5.0 5.0 1.2 9183 chrX 14105020 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114203 5` UTR CR44657 + chrX_7_14105001 chrX_14105001 RAL-367 1449 chrX 14414223 14414237 chrX 14414300 14414314 5 77 4.0 0.5 2.2 1.6 91 chrX 14414223 intron dpr8 + chrX 14414268 intron dpr8 + chrX 14414314 intron dpr8 + chrX_5_14410001 chrX_14410001 RAL-367 1450 chrX 14484970 14484985 chrX 14485059 14485074 4 89 0.0 3.5 1.8 1.4 104 chrX 14484970 intergenic not near genes chrX 14485022 intergenic not near genes chrX 14485074 intergenic not near genes chrX_4_14485001 chrX_14485001 RAL-367 1451 chrX 14499607 14499632 chrX 14499812 14499837 8 204 3.0 2.0 2.5 2.3 230 chrX 14499607 intergenic not near genes chrX 14499722 intergenic not near genes chrX 14499837 intergenic not near genes chrX_8_14495001 chrX_14495001 RAL-367 1452 chrX 14589698 14589705 chrX 14589935 14589937 pogo 4 236 0.0 6.0 3.0 1.0 239 chrX 14589698 intron CG9413 - chrX 14589818 intron CG9413 - chrX 14589937 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-367 1453 chrX 14615729 14615743 chrX 14615813 14615826 5 84 2.0 0.5 1.2 2.3 97 chrX 14615729 intron NetA - chrX 14615778 intron NetA - chrX 14615826 intron NetA - chrX_5_14615001 chrX_14615001 RAL-367 1454 chrX 14636462 14636492 chrX 14641903 14641929 I-element 8 5438 2.5 3.0 2.8 2.1 5467 chrX 14636462 intron NetA - chrX 14639196 intron NetA - chrX 14641929 intron NetA - chrX_8_14635001 chrX_14635001 RAL-367 1455 chrX 14714046 14714054 chrX 14714128 14714136 5 81 2.5 4.0 3.2 1.2 90 chrX 14714046 intron NetB - chrX 14714091 intron NetB - chrX 14714136 intron NetB - chrX_5_14710001 chrX_14710001 RAL-367 1456 chrX 14818763 14818794 chrX 14823967 14823998 copia 4 5203 2.5 1.5 2.0 1.3 5235 chrX 14818763 intron rut - chrX 14821380 intron rut - chrX 14823998 intron rut - chrX_4_14820001 chrX_14820001 RAL-367 1457 chrX 14968084 14968094 chrX 14968163 14968173 4 79 0.5 1.5 1.0 2.0 89 chrX 14968084 intron eag + chrX 14968128 intron eag + chrX 14968173 intron eag + chrX_4_14965001 chrX_14965001 RAL-367 1458 chrX 15161569 15161585 chrX 15161658 15161674 8 89 5.0 1.5 3.2 1.9 105 chrX 15161569 intron CG9095 - chrX 15161622 intron CG9095 - chrX 15161674 intron CG9095 - chrX_8_15160001 chrX_15160001 RAL-367 1459 chrX 15273703 15273738 chrX 15274870 15274905 1360 9 1164 2.0 2.5 2.2 2.8 1202 chrX 15273703 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274905 intergenic not near genes chrX_9_15270001 chrX_15270001 RAL-367 1460 chrX 15369846 15369861 chrX 15369929 15369944 8 83 1.5 3.0 2.2 2.5 98 chrX 15369846 intron acj6 - chrX 15369895 intron acj6 - chrX 15369944 intron acj6 - chrX_8_15365001 chrX_15365001 RAL-367 1461 chrX 15413053 15413084 chrX 15417355 15417386 Juan 8 4302 4.5 2.5 3.5 1.8 4333 chrX 15413053 intron Cngl - chrX 15415220 intron Cngl - chrX 15417386 intron Cngl - chrX_8_15415001 chrX_15415001 RAL-367 1462 chrX 15421934 15421952 chrX 15423441 15423458 pogo 4 1507 3.0 1.0 2.0 1.3 1524 chrX 15421934 intron Cngl - chrX 15422696 intron Cngl - chrX 15423458 intron Cngl - chrX_4_15420001 chrX_15420001 RAL-367 1463 chrX 15435687 15435698 chrX 15436120 15436131 rover 4 433 0.0 5.5 2.8 1.1 444 chrX 15435687 intron Cngl - chrX 15435909 intron Cngl - chrX 15436131 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-367 1464 chrX 15519800 15519823 chrX 15519878 15519901 7 78 2.5 2.5 2.5 2.0 101 chrX 15519800 intron Ac13E - chrX 15519850 intron Ac13E - chrX 15519901 intron Ac13E - chrX_7_15515001 chrX_15515001 RAL-367 1465 chrX 15522373 15522379 chrX 15522512 15522540 4 149 14.0 23.5 18.8 0.2 167 chrX 15522373 intron Ac13E - chrX 15522456 intron Ac13E - chrX 15522540 intron Ac13E - chrX_4_15520001 chrX_15520001 RAL-367 1466 chrX 15678038 15678065 chrX 15678115 15678142 13 77 4.0 2.0 3.0 3.2 104 chrX 15678038 intergenic CG12708 + chrX 15678090 intergenic CG12708 + chrX 15678142 intergenic CG12708 + chrX_13_15675001 chrX_15675001 RAL-367 1467 chrX 15681395 15681426 chrX 15681477 15681508 7 80 2.0 0.5 1.2 3.2 113 chrX 15681395 intergenic not near genes chrX 15681452 intergenic not near genes chrX 15681508 intergenic not near genes chrX_7_15680001 chrX_15680001 RAL-367 1468 chrX 15898446 15898454 chrX 15898600 15898608 5 154 1.0 2.5 1.8 1.8 162 chrX 15898446 intron shi + chrX 15898527 intron shi + chrX 15898608 intron shi + chrX_5_15895001 chrX_15895001 RAL-367 1469 chrX 16329438 16329445 chrX 16329521 16329528 4 83 0.0 5.5 2.8 1.1 90 chrX 16329438 intron CG9919 - chrX 16329483 intron CG9919 - chrX 16329528 exon CG9919 - chrX_4_16325001 chrX_16325001 RAL-367 1470 chrX 16529425 16529438 chrX 16529536 16529549 4 110 0.0 1.0 0.5 2.7 124 chrX 16529425 intron para - chrX 16529487 intron para - chrX 16529549 intron para - chrX_4_16525001 chrX_16525001 RAL-367 1471 chrX 16623486 16623497 chrX 16623572 16623583 5 86 4.0 0.5 2.2 1.6 97 chrX 16623486 intergenic not near genes chrX 16623534 intergenic Rok - chrX 16623583 intergenic Rok - chrX_5_16620001 chrX_16620001 RAL-367 1472 chrX 16648130 16648135 chrX 16648214 16648220 5 85 2.0 8.0 5.0 0.8 90 chrX 16648130 3` UTR mthl1 + chrX 16648175 3` UTR mthl1 + chrX 16648220 3` UTR mthl1 + chrX_5_16645001 chrX_16645001 RAL-367 1473 chrX 16677323 16677345 chrX 16677458 16677480 5 135 0.0 3.0 1.5 2.0 157 chrX 16677323 intergenic not near genes chrX 16677402 intergenic not near genes chrX 16677480 intergenic not near genes chrX_5_16675001 chrX_16675001 RAL-367 1474 chrX 16689626 16689653 chrX 16689712 16689734 5 81 4.0 2.0 3.0 1.2 108 chrX 16689626 intron Sep4 - chrX 16689680 intron Sep4 - chrX 16689734 intron Sep4 - chrX_5_16685001 chrX_16685001 RAL-367 1475 chrX 17011969 17011994 chrX 17012052 17012077 4 80 2.5 3.0 2.8 1.1 108 chrX 17011969 intron CG45002 - chrX 17012023 intron CG45002 - chrX 17012077 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-367 1476 chrX 17122638 17122671 chrX 17122729 17122762 8 91 1.5 2.5 2.0 2.7 124 chrX 17122638 intron CG5004 + chrX 17122700 intron CG5004 + chrX 17122762 intron CG5004 + chrX_8_17120001 chrX_17120001 RAL-367 1477 chrX 17234261 17234274 chrX 17234355 17234368 5 94 5.5 0.0 2.8 1.3 107 chrX 17234261 intron f + chrX 17234314 intron f + chrX 17234368 intron f + chrX_5_17230001 chrX_17230001 RAL-367 1478 chrX 17275531 17275555 chrX 17275610 17275634 5 79 3.5 4.5 4.0 1.0 103 chrX 17275531 intron f + chrX 17275582 intron f + chrX 17275634 intron f + chrX_5_17275001 chrX_17275001 RAL-367 1479 chrX 17282876 17282902 chrX 17282954 17282980 8 78 0.0 0.0 0.0 8.0 104 chrX 17282876 intron CG5445 + chrX 17282928 5` UTR CG5445 + chrX 17282980 intron CG5445 + chrX_8_17280001 chrX_17280001 RAL-367 1480 chrX 17477602 17477623 chrX 17477686 17477701 8 83 2.0 2.0 2.0 2.7 99 chrX 17477602 intron CG43658 - chrX 17477652 intron CG43658 - chrX 17477701 intron CG43658 - chrX_8_17475001 chrX_17475001 RAL-367 1481 chrX 17545009 17545036 chrX 17545091 17545118 6 82 1.5 2.5 2.0 2.0 109 chrX 17545009 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545118 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-367 1482 chrX 17820223 17820258 chrX 17820767 17820802 6 544 5.5 2.0 3.8 1.2 579 chrX 17820223 intergenic not near genes chrX 17820512 intergenic Socs16D - chrX 17820802 3` UTR Socs16D - chrX_6_17820001 chrX_17820001 RAL-367 1483 chrX 18125818 18125848 chrX 18125897 18125897 5 71 1.5 3.0 2.2 1.6 79 chrX 18125818 intron CG32553 - chrX 18125858 intron CG32553 - chrX 18125897 intron CG32553 - chrX_5_18125001 chrX_18125001 RAL-367 1484 chrX 18194065 18194099 chrX 18194600 18194625 BS 6 534 3.5 1.5 2.5 1.7 560 chrX 18194065 intron Frq2 + chrX 18194345 intron Frq2 + chrX 18194625 intron Frq2 + chrX_6_18190001 chrX_18190001 RAL-367 1485 chrX 18281548 18281579 chrX 18281630 18281660 5 82 3.5 2.5 3.0 1.2 112 chrX 18281548 intron upd3 + chrX 18281604 intron upd3 + chrX 18281660 intron upd3 + chrX_5_18280001 chrX_18280001 RAL-367 1486 chrX 18467233 18467249 chrX 18467397 18467413 4 164 4.0 2.5 3.2 1.0 180 chrX 18467233 intron CG32547 - chrX 18467323 intron CG32547 - chrX 18467413 intron CG32547 - chrX_4_18465001 chrX_18465001 RAL-367 1487 chrX 18558779 18558789 chrX 18558861 18558871 4 82 2.5 1.0 1.8 1.4 92 chrX 18558779 intron Bx + chrX 18558825 intron Bx + chrX 18558871 intron Bx + chrX_4_18555001 chrX_18555001 RAL-367 1488 chrX 18645013 18645047 chrX 18645111 18645145 7 98 1.0 1.0 1.0 3.5 132 chrX 18645013 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645145 intron Rip11 - chrX_7_18645001 chrX_18645001 RAL-367 1489 chrX 18921934 18921942 chrX 18922009 18922022 4 78 3.0 0.0 1.5 1.6 88 chrX 18921934 intergenic not near genes chrX 18921978 intergenic not near genes chrX 18922022 intergenic not near genes chrX_4_18920001 chrX_18920001 RAL-367 1490 chrX 19014359 19014386 chrX 19014437 19014465 9 76 1.0 4.0 2.5 2.6 106 chrX 19014359 intron CG43759 + chrX 19014412 intron CG43759 + chrX 19014465 intron CG43759 + chrX_9_19010001 chrX_19010001 RAL-367 1491 chrX 19060411 19060432 chrX 19065195 19065216 Doc 5 4784 1.0 3.0 2.0 1.7 4805 chrX 19060411 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065216 intron CG14190 + chrX_5_19060001 chrX_19060001 RAL-367 1492 chrX 19080342 19080355 chrX 19080448 19080461 4 106 0.5 1.0 0.8 2.2 119 chrX 19080342 intergenic not near genes chrX 19080402 intergenic not near genes chrX 19080461 intergenic not near genes chrX_4_19080001 chrX_19080001 RAL-367 1493 chrX 19099665 19099680 chrX 19099748 19099763 8 83 2.0 4.5 3.2 1.9 98 chrX 19099665 intergenic not near genes chrX 19099714 intergenic not near genes chrX 19099763 intergenic not near genes chrX_8_19095001 chrX_19095001 RAL-367 1494 chrX 19125693 19125721 chrX 19125822 19125839 5 127 0.0 3.0 1.5 2.0 146 chrX 19125693 intron tgy - chrX 19125766 intron tgy - chrX 19125839 intron tgy - chrX_5_19125001 chrX_19125001 RAL-367 1495 chrX 19182022 19182047 chrX 19182134 19182159 4 112 0.0 0.5 0.2 3.3 137 chrX 19182022 3` UTR CG7453 + chrX 19182090 intergenic CG7453 + chrX 19182159 intergenic CG7453 + chrX_4_19180001 chrX_19180001 RAL-367 1496 chrX 13057298 13057300 chrX 19242812 19242814 5 6185514 2.0 3.0 2.5 1.4 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_5_16150001 chrX_16150001 RAL-367 1497 chrX 19356995 19357018 chrX 19358436 19358459 NOF 6 1441 2.0 1.5 1.8 2.1 1464 chrX 19356995 intron kek5 + chrX 19357727 intron kek5 + chrX 19358459 intron kek5 + chrX_6_19355001 chrX_19355001 RAL-367 1498 chrX 19380162 19380186 chrX 19380403 19380427 pogo 6 241 4.5 1.0 2.8 1.6 265 chrX 19380162 intron kek5 + chrX 19380294 intron kek5 + chrX 19380427 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-367 1499 chrX 19472125 19472138 chrX 19472695 19472704 jockey 4 569 3.0 3.5 3.2 1.0 579 chrX 19472125 intergenic kek5 + chrX 19472414 intergenic kek5 + chrX 19472704 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-367 1500 chrX 19472143 19472156 chrX 19472692 19472720 jockey 6 560 2.0 3.0 2.5 1.7 577 chrX 19472143 intergenic kek5 + chrX 19472432 intergenic not near genes chrX 19472720 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-367 1501 chrX 19710072 19710096 chrX 19711858 19711882 S-element 8 1784 1.5 1.5 1.5 3.2 1810 chrX 19710072 intron meso18E - chrX 19710977 intron meso18E - chrX 19711882 intron meso18E - chrX_8_19710001 chrX_19710001 RAL-367 1502 chrX 19838506 19838525 chrX 19838583 19838603 6 76 2.5 2.0 2.2 1.9 97 chrX 19838506 intron pico - chrX 19838554 intron pico - chrX 19838603 intron pico - chrX_6_19835001 chrX_19835001 RAL-367 1503 chrX 19884086 19884122 chrX 19884162 19884198 4 76 1.5 2.0 1.8 1.4 112 chrX 19884086 intron Hers + chrX 19884142 intron Hers + chrX 19884198 intron Hers + chrX_4_19880001 chrX_19880001 RAL-367 1504 chrX 19992418 19992435 chrX 19992494 19992510 4 73 4.0 5.5 4.8 0.7 92 chrX 19992418 intergenic not near genes chrX 19992464 intergenic not near genes chrX 19992510 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-367 1505 chrX 20065818 20065833 chrX 20065897 20065912 4 79 0.5 1.0 0.8 2.2 94 chrX 20065818 intergenic not near genes chrX 20065865 intergenic not near genes chrX 20065912 intergenic not near genes chrX_4_20065001 chrX_20065001 RAL-367 1506 chrX 20166012 20166038 chrX 20166093 20166115 13 79 1.0 3.0 2.0 4.3 103 chrX 20166012 intergenic Phf7 - chrX 20166064 intergenic Phf7 - chrX 20166115 intergenic Phf7 - chrX_13_20165001 chrX_20165001 RAL-367 1507 chrX 20312883 20312910 chrX 20312958 20312988 6 78 0.5 0.5 0.5 4.0 105 chrX 20312883 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20312988 intron CG1504 - chrX_6_20310001 chrX_20310001 RAL-367 1508 chrX 20362872 20362881 chrX 20362949 20362958 4 77 1.5 0.5 1.0 2.0 86 chrX 20362872 intergenic not near genes chrX 20362915 intergenic not near genes chrX 20362958 intergenic not near genes chrX_4_20360001 chrX_20360001 RAL-367 1509 chrX 20374104 20374125 chrX 20374180 20374194 5 74 0.5 2.0 1.2 2.3 90 chrX 20374104 intergenic not near genes chrX 20374149 intergenic not near genes chrX 20374194 intergenic not near genes chrX_5_20370001 chrX_20370001 RAL-367 1510 chrX 20377328 20377349 chrX 20378795 20378816 hobo 7 1467 2.5 2.5 2.5 2.0 1488 chrX 20377328 intergenic not near genes chrX 20378072 intergenic not near genes chrX 20378816 intergenic not near genes chrX_7_20375001 chrX_20375001 RAL-367 1511 chrX 20384256 20384291 chrX 20384339 20384374 7 83 2.5 1.5 2.0 2.3 118 chrX 20384256 intergenic not near genes chrX 20384315 intergenic not near genes chrX 20384374 intergenic not near genes chrX_7_20380001 chrX_20380001 RAL-367 1512 chrX 20443169 20443205 chrX 20443245 20443281 8 76 2.5 1.0 1.8 2.9 112 chrX 20443169 exon CG1695 + chrX 20443225 intron CG1695 + chrX 20443281 intron CG1695 + chrX_8_20440001 chrX_20440001 RAL-367 1513 chrX 20455636 20455667 chrX 20455722 20455753 6 86 0.5 1.0 0.8 3.3 117 chrX 20455636 intron CG32506 + chrX 20455694 intron CG32506 + chrX 20455753 intron CG32506 + chrX_6_20455001 chrX_20455001 RAL-367 1514 chrX 20504141 20504157 chrX 20505650 20505678 transib2 10 1518 1.5 2.0 1.8 3.6 1537 chrX 20504141 intron RhoGAP19D - chrX 20504910 intron RhoGAP19D - chrX 20505678 intron RhoGAP19D - chrX_10_20500001 chrX_20500001 RAL-367 1515 chrX 20560263 20560279 chrX 20560363 20560379 4 100 2.0 1.0 1.5 1.6 116 chrX 20560263 intron RunxB + chrX 20560321 intron RunxB + chrX 20560379 intron RunxB + chrX_4_20560001 chrX_20560001 RAL-367 1516 chrX 20710413 20710442 chrX 20710490 20710519 6 77 0.0 1.5 0.8 3.3 106 chrX 20710413 intergenic not near genes chrX 20710466 intergenic not near genes chrX 20710519 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-367 1517 chrX 20915048 20915073 chrX 20915219 20915244 4 171 2.5 1.0 1.8 1.4 196 chrX 20915048 intron shakB - chrX 20915146 intron shakB - chrX 20915244 intron shakB - chrX_4_20915001 chrX_20915001 RAL-367 1518 chrX 20940718 20940754 chrX 20942187 20942223 hobo 7 1469 1.0 2.0 1.5 2.8 1505 chrX 20940718 intergenic not near genes chrX 20941470 intergenic not near genes chrX 20942223 intergenic not near genes chrX_7_20940001 chrX_20940001 RAL-367 1519 chrX 20956987 20957013 chrX 20962429 20962455 I-element 4 5442 0.5 0.5 0.5 2.7 5468 chrX 20956987 intergenic not near genes chrX 20959721 intergenic not near genes chrX 20962455 intergenic Ser6 - chrX_4_20955001 chrX_20955001 RAL-367 1520 chrX 20981028 20981059 chrX 20981131 20981162 5 103 0.5 1.5 1.0 2.5 134 chrX 20981028 intergenic not near genes chrX 20981095 intergenic not near genes chrX 20981162 intergenic not near genes chrX_5_20980001 chrX_20980001 RAL-367 1521 chrX 21086129 21086144 chrX 21087159 21087163 jockey 7 1028 3.5 2.0 2.8 1.8 1034 chrX 21086129 intergenic not near genes chrX 21086646 intergenic not near genes chrX 21087163 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-367 1522 chrX 21088043 21088073 chrX 21088175 21088205 7 132 0.0 0.5 0.2 5.8 162 chrX 21088043 intergenic not near genes chrX 21088124 intergenic not near genes chrX 21088205 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-367 1523 chrX 21358074 21358088 chrX 21358154 21358168 4 80 1.0 1.0 1.0 2.0 94 chrX 21358074 intergenic sol +,Sep1 + chrX 21358121 intergenic Sep1 +,sol + chrX 21358168 intergenic Sep1 +,sol + chrX_4_21355001 chrX_21355001 RAL-367 1524 chrX 21419725 21419737 chrX 21419814 21419821 5 88 1.0 3.5 2.2 1.6 96 chrX 21419725 intergenic not near genes chrX 21419773 intergenic not near genes chrX 21419821 intergenic not near genes chrX_5_21415001 chrX_21415001 RAL-367 1525 chrX 21500565 21500588 chrX 21500766 21500789 5 201 0.0 2.0 1.0 2.5 224 chrX 21500565 intron CR45082 - chrX 21500677 intron CR45082 - chrX 21500789 intron CR45082 - chrX_5_21500001 chrX_21500001 RAL-367 1526 chrX 21565415 21565444 chrX 21565493 21565522 6 78 0.0 1.5 0.8 3.3 107 chrX 21565415 intergenic not near genes chrX 21565468 intergenic not near genes chrX 21565522 intergenic not near genes chrX_6_21565001 chrX_21565001 RAL-367 1527 chrX 21668255 21668286 chrX 21668340 21668343 4 78 0.5 1.5 1.0 2.0 88 chrX 21668255 intergenic not near genes chrX 21668299 intergenic not near genes chrX 21668343 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-367 1528 chrX 22478891 22478895 chrX 22479024 22479028 4 133 0.0 4.0 2.0 1.3 137 chrX 22478891 intron CG12576 - chrX 22478960 intron CG12576 - chrX 22479028 intron CG12576 - chrX_4_22475001 chrX_22475001 RAL-367 1529 chrX 22522646 22522661 chrX 22525466 22525480 NOF 4 2820 1.5 0.0 0.8 2.2 2834 chrX 22522646 intron CG17600 + chrX 22524063 intron CG17600 + chrX 22525480 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-367 1530 chrX 22658160 22658175 chrX 22658330 22658345 4 170 0.5 0.5 0.5 2.7 185 chrX 22658160 intron CR44997 + chrX 22658252 intron CR44997 + chrX 22658345 intron CR44997 + chrX_4_22655001 chrX_22655001 RAL-367 1531 chrX 22697494 22697517 chrX 22701791 22701814 Juan 5 4296 2.5 2.0 2.2 1.6 4320 chrX 22697494 intron CR44997 + chrX 22699654 intron CR44997 + chrX 22701814 intron CR44997 + chrX_5_22695001 chrX_22695001 RAL-367 1532 chrX 22870878 22870900 chrX 22870969 22870991 8 89 0.5 5.0 2.8 2.1 113 chrX 22870878 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22870991 intron,3` UTR CG42346 +,CR43656 - chrX_8_22870001 chrX_22870001 RAL-367 1533 chrX 22996308 22996337 chrX 23003542 23003571 roo 12 7233 3.0 1.0 2.0 4.0 7263 chrX 22996308 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003571 intron,intron stnA -,stnB - chrX_12_22995001 chrX_22995001 RAL-367 1534 chrY 975802 975821 chrY 975882 975928 5 90 85.0 104.0 94.5 0.1 126 chrY 975802 intergenic not near genes chrY 975865 intergenic not near genes chrY 975928 intergenic not near genes chrY_5_975001 chrY_975001 RAL-367