SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 220484 220557 pogo 1 2091 11 73 '3-8 63.85 2.2 3.4 intron kis - chr2L_11_220001 chr2L_220001 0.27 RAL-362_75b 2 chr2L 584003 584038 G2 390 425 6 35 '1-5 68.71 1.8 2.1 3` UTR Gsc - chr2L_6_580001 chr2L_580001 0.17 RAL-362_75b 3 chr2L 989164 989212 blood 377 7038 5 48 '4-1 64.75 0.4 3.6 intron CR44801 - chr2L_5_985001 chr2L_985001 0.80 RAL-362_75b 4 chr2L 1242107 1242175 roo 401 4 6 68 '3-3 68.81 2.1 1.9 exon CG5397 + chr2L_6_1240001 chr2L_1240001 0.50 RAL-362_75b 5 chr2L 1331957 1331984 blood 26 7010 5 27 '1-4 66.40 0.3 3.8 intergenic not near genes chr2L_5_1330001 chr2L_1330001 0.20 RAL-362_75b 6 chr2L 1559107 1559153 3S18 6078 5772 4 46 '1-3 63.06 2.4 1.2 intron haf + chr2L_4_1555001 chr2L_1555001 0.25 RAL-362_75b 7 chr2L 1662106 1662184 1360 3382 1 12 78 '5-7 67.71 0.4 8.6 intron chinmo + chr2L_12_1660001 chr2L_1660001 0.42 RAL-362_75b 8 chr2L 2073817 2073878 hobo 4 2926 10 61 '7-3 64.19 2.0 3.3 intron dpr3 - chr2L_10_2070001 chr2L_2070001 0.70 RAL-362_75b 9 chr2L 2165536 2165569 I-element 5331 14 4 33 '2-2 67.67 1.6 1.5 intron aop - chr2L_4_2165001 chr2L_2165001 0.50 RAL-362_75b 10 chr2L 2397985 2398054 roo 12 409 6 69 '3-3 56.63 2.0 2.0 intron VGlut + chr2L_6_2395001 chr2L_2395001 0.50 RAL-362_75b 11 chr2L 2444873 2444944 hobo 4 2937 11 71 '7-4 60.43 2.2 3.4 intron dpp + chr2L_11_2440001 chr2L_2440001 0.64 RAL-362_75b 12 chr2L 2584757 2584804 Burdock 236 16 7 47 '4-3 68.47 2.1 2.3 intron Drp1 - chr2L_7_2580001 chr2L_2580001 0.57 RAL-362_75b 13 chr2L 3104095 3104137 hobo 33 2937 5 42 '4-1 68.54 1.6 1.9 intron toc - chr2L_5_3100001 chr2L_3100001 0.80 RAL-362_75b 14 chr2L 3174658 3174728 Ivk 5374 5310 4 70 '2-2 58.83 1.0 2.0 intergenic CG15404 + chr2L_4_3170001 chr2L_3170001 0.50 RAL-362_75b 15 chr2L 4251447 4251518 412 7542 6 5 71 '1-4 65.48 1.8 1.8 intergenic not near genes chr2L_5_4250001 chr2L_4250001 0.20 RAL-362_75b 16 chr2L 4852802 4852845 P-element 2875 23 6 43 '4-2 42.41 2.5 1.7 intergenic pog +,Mon1 + chr2L_6_4850001 chr2L_4850001 0.67 RAL-362_75b 17 chr2L 4857271 4857324 flea 4986 4757 4 53 '2-2 72.92 1.8 1.4 intron pog + chr2L_4_4855001 chr2L_4855001 0.50 RAL-362_75b 18 chr2L 4862500 4862523 I-element 5342 5319 4 23 '3-1 63.33 0.7 2.4 intron pog + chr2L_4_4860001 chr2L_4860001 0.75 RAL-362_75b 19 chr2L 5105919 5105971 flea 4999 4770 4 52 '1-3 72.48 0.4 2.9 intron Msp300 + chr2L_4_5105001 chr2L_5105001 0.25 RAL-362_75b 20 chr2L 5223195 5223258 copia 4 242 5 63 '2-3 61.68 1.9 1.7 intron tkv - chr2L_5_5220001 chr2L_5220001 0.40 RAL-362_75b 21 chr2L 5724317 5724373 1360 3375 9 4 56 '1-3 56.16 0.0 4.0 intergenic CG11030 +,sip1 + chr2L_4_5720001 chr2L_5720001 0.25 RAL-362_75b 22 chr2L 5790868 5790934 FB 5 6 6 66 '4-2 64.45 1.9 2.1 intron CG9171 - chr2L_6_5790001 chr2L_5790001 0.67 RAL-362_75b 23 chr2L 5796493 5796562 roo 8665 399 5 69 '3-2 64.19 1.8 1.8 intron CG9171 - chr2L_5_5795001 chr2L_5795001 0.60 RAL-362_75b 24 chr2L 5805863 5805919 hopper 1411 1395 6 56 '4-2 63.61 0.4 4.3 intron CG11034 + chr2L_6_5805001 chr2L_5805001 0.67 RAL-362_75b 25 chr2L 6162352 6162430 3S18 6105 1 8 78 '3-5 66.81 2.2 2.5 intergenic not near genes chr2L_8_6160001 chr2L_6160001 0.38 RAL-362_75b 26 chr2L 6246638 6246697 412 495 7077 5 59 '2-3 64.80 2.6 1.4 intergenic not near genes chr2L_5_6245001 chr2L_6245001 0.40 RAL-362_75b 27 chr2L 6358389 6358462 roo 410 9 4 73 '2-2 69.00 1.1 1.9 3` UTR CR44777 - chr2L_4_6355001 chr2L_6355001 0.50 RAL-362_75b 28 chr2L 7459563 7459617 BS 4997 5081 7 54 '4-3 63.08 1.2 3.2 intron Gr28b - chr2L_7_7455001 chr2L_7455001 0.57 RAL-362_75b 29 chr2L 7485791 7485866 pogo 7 2099 4 75 '3-1 67.28 2.4 1.2 intron Ziz - chr2L_4_7485001 chr2L_7485001 0.75 RAL-362_75b 30 chr2L 8159778 8159840 P-element 2874 3 8 62 '3-5 55.90 1.4 3.3 intergenic Rbsn-5 +,CG8552 - chr2L_8_8155001 chr2L_8155001 0.38 RAL-362_75b 31 chr2L 8798560 8798629 pogo 2090 4 6 69 '3-3 66.44 1.0 3.0 intergenic not near genes chr2L_6_8795001 chr2L_8795001 0.50 RAL-362_75b 32 chr2L 8948507 8948529 Tirant 379 401 6 22 '3-3 64.89 1.3 2.6 intron C1GalTA - chr2L_6_8945001 chr2L_8945001 0.50 RAL-362_75b 33 chr2L 8993964 8994032 pogo 2090 4 5 68 '3-2 64.89 1.2 2.3 3` UTR alien - chr2L_5_8990001 chr2L_8990001 0.60 RAL-362_75b 34 chr2L 9075436 9075518 roo 414 8668 6 82 '4-2 68.22 1.3 2.6 intergenic not near genes chr2L_6_9075001 chr2L_9075001 0.67 RAL-362_75b 35 chr2L 9383554 9383582 copia 4873 4901 6 28 '3-3 67.11 0.0 6.0 intron Shawl - chr2L_6_9380001 chr2L_9380001 0.50 RAL-362_75b 36 chr2L 9619932 9619958 FB 1 27 7 26 '2-5 65.28 0.6 4.4 intron GlcAT-S + chr2L_7_9615001 chr2L_9615001 0.29 RAL-362_75b 37 chr2L 9854994 9855024 hobo 33 4 5 30 '2-3 65.54 1.4 2.1 intron nAChRalpha6 - chr2L_5_9850001 chr2L_9850001 0.40 RAL-362_75b 38 chr2L 9882450 9882524 mdg3 5250 237 8 74 '6-2 65.94 2.0 2.7 intron nAChRalpha6 - chr2L_8_9880001 chr2L_9880001 0.75 RAL-362_75b 39 chr2L 9950187 9950208 jockey 4677 4701 6 21 '1-5 58.59 1.4 2.5 intergenic mir-87 - chr2L_6_9950001 chr2L_9950001 0.17 RAL-362_75b 40 chr2L 10089530 10089583 roo 388 8671 5 53 '1-4 70.08 1.8 1.8 intron CG44153 - chr2L_5_10085001 chr2L_10085001 0.20 RAL-362_75b 41 chr2L 12143483 12143526 pogo 2070 9 6 43 '1-5 65.73 0.2 5.0 intron CG31760 + chr2L_6_12140001 chr2L_12140001 0.17 RAL-362_75b 42 chr2L 12360432 12360463 BS 20 5076 4 31 '3-1 65.33 2.2 1.2 intron bru-2 + chr2L_4_12360001 chr2L_12360001 0.75 RAL-362_75b 43 chr2L 13233162 13233187 opus 7476 498 5 25 '4-1 69.25 1.6 1.9 intergenic Prosalpha6T + chr2L_5_13230001 chr2L_13230001 0.80 RAL-362_75b 44 chr2L 13731738 13731757 hopper 4 23 4 19 '3-1 60.67 1.4 1.7 intergenic not near genes chr2L_4_13730001 chr2L_13730001 0.75 RAL-362_75b 45 chr2L 14476254 14476317 pogo 2086 6 5 63 '3-2 62.67 1.9 1.7 intergenic not near genes chr2L_5_14475001 chr2L_14475001 0.60 RAL-362_75b 46 chr2L 14816383 14816409 297 6972 6946 5 26 '2-3 77.60 2.4 1.5 intergenic not near genes chr2L_5_14815001 chr2L_14815001 0.40 RAL-362_75b 47 chr2L 15181881 15181989 flea 10 4942 4 108 '3-1 64.82 1.4 1.7 intron CG4168 - chr2L_4_15180001 chr2L_15180001 0.75 RAL-362_75b 48 chr2L 17176331 17176354 copia 4872 4894 4 23 '2-2 62.56 2.0 1.3 intergenic Gr36a + chr2L_4_17175001 chr2L_17175001 0.50 RAL-362_75b 49 chr2L 17288656 17288728 Transpac 4923 305 11 72 '3-8 64.84 1.7 4.1 intergenic not near genes chr2L_11_17285001 chr2L_17285001 0.27 RAL-362_75b 50 chr2L 18472502 18472585 roo 411 8664 6 83 '3-3 64.89 1.7 2.2 intron let-7-C + chr2L_6_18470001 chr2L_18470001 0.50 RAL-362_75b 51 chr2L 19098631 19098699 hobo 12 2709 5 68 '2-3 64.34 2.5 1.4 intron Lim3 - chr2L_5_19095001 chr2L_19095001 0.40 RAL-362_75b 52 chr2L 19409051 19409094 roo 16 9051 4 43 '2-2 66.87 1.4 1.7 intron Pax - chr2L_4_19405001 chr2L_19405001 0.50 RAL-362_75b 53 chr2L 19615957 19615984 hopper 33 1411 7 27 '5-2 63.35 1.2 3.2 intron Lar + chr2L_7_19615001 chr2L_19615001 0.71 RAL-362_75b 54 chr2L 19921114 19921179 blood 7378 7015 9 65 '4-5 65.92 2.0 3.0 intron,5` UTR sick +,CR43828 + chr2L_9_19920001 chr2L_19920001 0.44 RAL-362_75b 55 chr2L 20394995 20395053 Max-element 8525 8246 6 58 '2-4 56.02 0.4 4.3 intron CG10947 - chr2L_6_20390001 chr2L_20390001 0.33 RAL-362_75b 56 chr2L 20494096 20494124 Transpac 33 4924 4 28 '3-1 63.66 1.2 1.8 intergenic not near genes chr2L_4_20490001 chr2L_20490001 0.75 RAL-362_75b 57 chr2L 21273091 21273138 1360 3371 14 5 47 '4-1 72.15 1.3 2.2 intron CG8671 + chr2L_5_21270001 chr2L_21270001 0.80 RAL-362_75b 58 chr2L 21571621 21571686 flea 4759 241 5 65 '2-3 64.16 1.9 1.7 intergenic not near genes chr2L_5_21570001 chr2L_21570001 0.40 RAL-362_75b 59 chr2L 22241775 22241798 pogo 27 4 4 23 '2-2 66.55 0.7 2.4 3` UTR CG3262 + chr2L_4_22240001 chr2L_22240001 0.50 RAL-362_75b 60 chr2R 982052 982106 gypsy 7429 8 5 54 '2-3 66.40 2.3 1.5 intergenic not near genes chr2R_5_980001 chr2R_980001 0.40 RAL-362_75b 61 chr2R 1570068 1570091 copia 229 252 4 23 '1-3 64.33 0.7 2.4 intergenic not near genes chr2R_4_1570001 chr2R_1570001 0.25 RAL-362_75b 62 chr2R 4606218 4606281 1360 8 3381 7 63 '2-5 61.58 2.6 1.9 intron p120ctn + chr2R_7_4605001 chr2R_4605001 0.29 RAL-362_75b 63 chr2R 5374148 5374165 1360 3383 3366 5 17 '4-1 59.47 3.4 1.1 intergenic not near genes chr2R_5_5370001 chr2R_5370001 0.80 RAL-362_75b 64 chr2R 5862657 5862720 blood 379 7031 5 63 '4-1 56.27 1.2 2.3 intergenic not near genes chr2R_5_5860001 chr2R_5860001 0.80 RAL-362_75b 65 chr2R 6757331 6757385 P-element 15 2878 7 54 '3-4 42.63 1.2 3.2 intergenic CG3420 -,CG9436 - chr2R_7_6755001 chr2R_6755001 0.43 RAL-362_75b 66 chr2R 6779772 6779842 17.6 7412 5 8 70 '3-5 74.19 1.0 4.0 intron,3` UTR Epac -,Cyp6a2 - chr2R_8_6775001 chr2R_6775001 0.38 RAL-362_75b 67 chr2R 7040170 7040190 P-element 2863 2883 4 20 '1-3 58.53 1.7 1.5 5` UTR Tsp42Ej + chr2R_4_7040001 chr2R_7040001 0.25 RAL-362_75b 68 chr2R 7131249 7131270 Transpac 308 5205 4 21 '2-2 66.23 2.7 1.1 intron Cyp9b2 - chr2R_4_7130001 chr2R_7130001 0.50 RAL-362_75b 69 chr2R 7232691 7232713 jockey 29 7 5 22 '1-4 66.67 1.3 2.2 intergenic Or43a - chr2R_5_7230001 chr2R_7230001 0.20 RAL-362_75b 70 chr2R 8235847 8235897 412 479 7070 5 50 '2-3 60.00 0.8 2.8 intergenic not near genes chr2R_5_8235001 chr2R_8235001 0.40 RAL-362_75b 71 chr2R 9968406 9968427 1360 3367 2 6 21 '2-4 65.39 1.4 2.5 intergenic CG12133 + chr2R_6_9965001 chr2R_9965001 0.33 RAL-362_75b 72 chr2R 10340635 10340705 Tirant 400 12 7 70 '5-2 62.97 1.3 3.0 intron CG42732 - chr2R_7_10340001 chr2R_10340001 0.71 RAL-362_75b 73 chr2R 10684839 10684894 roo 8675 9055 4 55 '1-3 61.54 2.3 1.2 intron stan + chr2R_4_10680001 chr2R_10680001 0.25 RAL-362_75b 74 chr2R 11379721 11379765 jockey 4674 4973 7 44 '4-3 61.85 0.9 3.7 intergenic not near genes chr2R_7_11375001 chr2R_11375001 0.57 RAL-362_75b 75 chr2R 11615055 11615084 P-element 20 4 5 29 '2-3 37.16 0.6 3.1 intron tou - chr2R_5_11615001 chr2R_11615001 0.40 RAL-362_75b 76 chr2R 12528980 12529043 P-element 2886 13 6 63 '3-3 49.96 1.2 2.7 intergenic fra + chr2R_6_12525001 chr2R_12525001 0.50 RAL-362_75b 77 chr2R 12650237 12650315 Transpac 4920 307 7 78 '4-3 66.67 0.9 3.7 intergenic not near genes chr2R_7_12650001 chr2R_12650001 0.57 RAL-362_75b 78 chr2R 12728911 12728936 Doc 3 28 7 25 '6-1 59.34 1.9 2.4 intron CG42663 + chr2R_7_12725001 chr2R_12725001 0.86 RAL-362_75b 79 chr2R 13541532 13541561 jockey 4939 4968 6 29 '3-3 61.41 1.7 2.2 intron CG6145 - chr2R_6_13540001 chr2R_13540001 0.50 RAL-362_75b 80 chr2R 13717743 13717798 412 11 480 5 55 '3-2 57.74 1.7 1.9 intron fas + chr2R_5_13715001 chr2R_13715001 0.60 RAL-362_75b 81 chr2R 14334686 14334730 412 489 32 7 44 '4-3 65.95 0.9 3.7 intron Shroom + chr2R_7_14330001 chr2R_14330001 0.57 RAL-362_75b 82 chr2R 14943337 14943400 hobo 4 2928 4 63 '3-1 55.16 0.9 2.1 intron CG10257 + chr2R_4_14940001 chr2R_14940001 0.75 RAL-362_75b 83 chr2R 15076159 15076246 412 8 7540 4 87 '1-3 54.67 0.5 2.7 intergenic not near genes chr2R_4_15075001 chr2R_15075001 0.25 RAL-362_75b 84 chr2R 15637631 15637649 jockey 4683 4701 5 18 '3-2 69.86 2.9 1.3 intron CG42524 + chr2R_5_15635001 chr2R_15635001 0.60 RAL-362_75b 85 chr2R 17268764 17268814 FB 6 6 7 50 '2-5 54.04 2.3 2.1 intron mbl + chr2R_7_17265001 chr2R_17265001 0.29 RAL-362_75b 86 chr2R 17315346 17315401 1360 8 16 11 55 '3-8 67.82 1.2 5.0 intron mbl + chr2R_11_17315001 chr2R_17315001 0.27 RAL-362_75b 87 chr2R 17852496 17852563 blood 7 7382 14 67 '11-3 63.54 3.8 2.9 intron olf186-F + chr2R_14_17850001 chr2R_17850001 0.79 RAL-362_75b 88 chr2R 18689742 18689814 P-element 1 2884 4 72 '2-2 44.00 1.1 1.9 intron Sik3 + chr2R_4_18685001 chr2R_18685001 0.50 RAL-362_75b 89 chr2R 19101470 19101522 hobo 23 2936 5 52 '1-4 61.07 1.8 1.8 intron 5-HT1A + chr2R_5_19100001 chr2R_19100001 0.20 RAL-362_75b 90 chr2R 19275254 19275320 P-element 10 1 5 66 '1-4 53.76 1.5 2.0 intron rib + chr2R_5_19275001 chr2R_19275001 0.20 RAL-362_75b 91 chr2R 19480344 19480409 roo 8666 9058 8 65 '6-2 60.50 1.7 3.0 intron par-1 + chr2R_8_19480001 chr2R_19480001 0.75 RAL-362_75b 92 chr2R 19617541 19617876 pogo 2086 2 10 335 '4-6 65.83 1.1 4.8 intron sm - chr2R_10_19615001 chr2R_19615001 0.40 RAL-362_75b 93 chr2R 21596238 21596318 297 394 2 4 80 '2-2 67.22 1.6 1.5 intergenic not near genes chr2R_4_21595001 chr2R_21595001 0.50 RAL-362_75b 94 chr2R 22288621 22288642 mdg3 5281 5260 6 21 '3-3 60.81 0.7 3.5 intergenic not near genes chr2R_6_22285001 chr2R_22285001 0.50 RAL-362_75b 95 chr2R 22450295 22450351 hopper 5 20 5 56 '4-1 61.87 1.9 1.7 intergenic not near genes chr2R_5_22450001 chr2R_22450001 0.80 RAL-362_75b 96 chr2R 22791712 22791739 jockey 4678 4705 4 27 '2-2 63.53 1.8 1.4 intron CG42260 - chr2R_4_22790001 chr2R_22790001 0.50 RAL-362_75b 97 chr2R 23344211 23344282 412 7539 12 7 71 '4-3 61.97 1.9 2.4 exon CG3502 - chr2R_7_23340001 chr2R_23340001 0.57 RAL-362_75b 98 chr2R 25121621 25121704 flea 255 4755 7 83 '1-6 67.82 2.7 1.9 intron lov - chr2R_7_25120001 chr2R_25120001 0.14 RAL-362_75b 99 chr3L 671730 671806 roo 409 5 13 76 '7-6 66.24 0.9 6.8 intergenic not near genes chr3L_13_670001 chr3L_670001 0.54 RAL-362_75b 100 chr3L 763578 763645 roo 398 8668 5 67 '3-2 61.31 0.5 3.3 intergenic not near genes chr3L_5_760001 chr3L_760001 0.60 RAL-362_75b 101 chr3L 1443600 1443659 412 24 495 5 59 '1-4 68.91 1.8 1.8 intron Ptp61F - chr3L_5_1440001 chr3L_1440001 0.20 RAL-362_75b 102 chr3L 3798582 3798626 1360 5 29 4 44 '3-1 64.59 1.1 1.9 intron CG32264 - chr3L_4_3795001 chr3L_3795001 0.75 RAL-362_75b 103 chr3L 4976279 4976489 P-element 21 2884 11 210 '5-6 40.23 0.7 6.5 intron Con - chr3L_11_4975001 chr3L_4975001 0.45 RAL-362_75b 104 chr3L 5309603 5309627 jockey 4676 4700 4 24 '1-3 66.77 2.2 1.2 intergenic not near genes chr3L_4_5305001 chr3L_5305001 0.25 RAL-362_75b 105 chr3L 5394975 5395025 412 7534 7072 6 50 '3-3 61.39 0.6 3.8 intergenic not near genes chr3L_6_5390001 chr3L_5390001 0.50 RAL-362_75b 106 chr3L 6305270 6305320 412 7526 11 11 50 '4-7 64.99 1.0 5.5 3` UTR CR45114 - chr3L_11_6305001 chr3L_6305001 0.36 RAL-362_75b 107 chr3L 6534292 6534351 roo 8676 399 6 59 '3-3 66.67 1.8 2.1 intron sfl + chr3L_6_6530001 chr3L_6530001 0.50 RAL-362_75b 108 chr3L 6554673 6554731 roo 9 395 6 58 '3-3 61.69 2.0 2.0 intron CG18769 + chr3L_6_6550001 chr3L_6550001 0.50 RAL-362_75b 109 chr3L 6578502 6578571 roo 8668 401 7 69 '2-5 61.44 1.0 3.5 intron,intron CG18769 +,jv - chr3L_7_6575001 chr3L_6575001 0.29 RAL-362_75b 110 chr3L 7158048 7158117 1360 4 6 9 69 '3-6 60.75 2.3 2.7 intergenic CG8620 + chr3L_9_7155001 chr3L_7155001 0.33 RAL-362_75b 111 chr3L 7176645 7176703 I-element 5347 12 6 58 '3-3 60.06 1.3 2.6 intron Dscam2 - chr3L_6_7175001 chr3L_7175001 0.50 RAL-362_75b 112 chr3L 7489430 7489495 roo 399 6 7 65 '3-4 66.67 0.3 5.4 intergenic not near genes chr3L_7_7485001 chr3L_7485001 0.43 RAL-362_75b 113 chr3L 7992272 7992344 pogo 2 2091 7 72 '3-4 67.58 0.6 4.4 intron nmo + chr3L_7_7990001 chr3L_7990001 0.43 RAL-362_75b 114 chr3L 10037721 10037799 pogo 2098 2 9 78 '2-7 67.50 2.1 2.9 intron dpr6 + chr3L_9_10035001 chr3L_10035001 0.22 RAL-362_75b 115 chr3L 12112348 12112405 1360 20 3387 7 57 '4-3 70.78 1.1 3.3 intergenic not near genes chr3L_7_12110001 chr3L_12110001 0.57 RAL-362_75b 116 chr3L 13164013 13164079 mdg1 7456 9 8 66 '4-4 62.64 0.7 4.7 intergenic not near genes chr3L_8_13160001 chr3L_13160001 0.50 RAL-362_75b 117 chr3L 13227738 13227780 P-element 11 2865 4 42 '2-2 44.11 1.8 1.4 intergenic not near genes chr3L_4_13225001 chr3L_13225001 0.50 RAL-362_75b 118 chr3L 13228477 13228544 P-element 5 2881 10 67 '7-3 51.07 3.0 2.5 intergenic caps + chr3L_10_13225001 chr3L_13225001 0.70 RAL-362_75b 119 chr3L 13359730 13359807 copia 254 4871 5 77 '1-4 68.21 1.1 2.4 intergenic not near genes chr3L_5_13355001 chr3L_13355001 0.20 RAL-362_75b 120 chr3L 13544999 13545052 hobo 2927 13 5 53 '4-1 61.60 2.0 1.7 intron bru-3 - chr3L_5_13540001 chr3L_13540001 0.80 RAL-362_75b 121 chr3L 13604085 13604269 hobo 3 2708 8 184 '4-4 67.00 1.1 3.8 intron bru-3 - chr3L_8_13600001 chr3L_13600001 0.50 RAL-362_75b 122 chr3L 14407063 14407124 hobo 8 2929 9 61 '1-8 65.41 0.7 5.3 intron stwl - chr3L_9_14405001 chr3L_14405001 0.11 RAL-362_75b 123 chr3L 14578694 14578754 springer 7157 382 6 60 '3-3 63.40 0.7 3.5 intergenic not near genes chr3L_6_14575001 chr3L_14575001 0.50 RAL-362_75b 124 chr3L 15591513 15591573 pogo 2 2079 5 60 '4-1 67.73 0.5 3.3 intron RhoGAP71E + chr3L_5_15590001 chr3L_15590001 0.80 RAL-362_75b 125 chr3L 15919061 15919109 Juan 12 4203 4 48 '3-1 53.85 0.2 3.3 intron sff - chr3L_4_15915001 chr3L_15915001 0.75 RAL-362_75b 126 chr3L 16155597 16155660 FB 3 8 4 63 '3-1 68.36 1.2 1.8 intron CG5151 - chr3L_4_16155001 chr3L_16155001 0.75 RAL-362_75b 127 chr3L 16169820 16169871 roo 399 8683 10 51 '7-3 67.92 2.2 3.1 exon CG33796 - chr3L_10_16165001 chr3L_16165001 0.70 RAL-362_75b 128 chr3L 16401595 16401642 pogo 2073 9 4 47 '1-3 65.33 1.5 1.6 intergenic not near genes chr3L_4_16400001 chr3L_16400001 0.25 RAL-362_75b 129 chr3L 17550649 17550710 412 7071 7546 9 61 '4-5 65.34 1.2 4.1 3` UTR CG7542 + chr3L_9_17550001 chr3L_17550001 0.44 RAL-362_75b 130 chr3L 18340229 18340309 copia 256 1 5 80 '3-2 69.14 0.1 4.5 intergenic not near genes chr3L_5_18340001 chr3L_18340001 0.60 RAL-362_75b 131 chr3L 18550264 18550335 17.6 10 491 4 71 '3-1 64.00 1.1 1.9 intergenic not near genes chr3L_4_18550001 chr3L_18550001 0.75 RAL-362_75b 132 chr3L 19385264 19385329 roo 13 408 6 65 '2-4 64.89 0.3 4.6 intron CG32206 - chr3L_6_19385001 chr3L_19385001 0.33 RAL-362_75b 133 chr3L 19510802 19510879 Tabor 5 489 7 77 '3-4 63.92 1.8 2.5 intergenic not near genes chr3L_7_19510001 chr3L_19510001 0.43 RAL-362_75b 134 chr3L 20892481 20892541 roo 8688 412 4 60 '3-1 72.56 2.2 1.2 intergenic not near genes chr3L_4_20890001 chr3L_20890001 0.75 RAL-362_75b 135 chr3L 20983549 20983604 blood 7022 7376 4 55 '2-2 68.86 0.2 3.3 intergenic not near genes chr3L_4_20980001 chr3L_20980001 0.50 RAL-362_75b 136 chr3L 21049754 21049769 jockey 17 32 6 15 '3-3 61.09 2.8 1.6 intron siz + chr3L_6_21045001 chr3L_21045001 0.50 RAL-362_75b 137 chr3L 21779085 21779150 roo 407 8678 4 65 '3-1 63.90 1.7 1.5 intergenic not near genes chr3L_4_21775001 chr3L_21775001 0.75 RAL-362_75b 138 chr3L 21864803 21864845 pogo 2089 30 4 42 '3-1 71.53 0.9 2.1 intron mub + chr3L_4_21860001 chr3L_21860001 0.75 RAL-362_75b 139 chr3L 22616988 22617049 hobo 2927 5 10 61 '4-6 65.12 2.1 3.2 intron CG14459 - chr3L_10_22615001 chr3L_22615001 0.40 RAL-362_75b 140 chr3L 22702505 22702573 roo 8673 405 6 68 '4-2 65.93 1.6 2.3 intergenic not near genes chr3L_6_22700001 chr3L_22700001 0.67 RAL-362_75b 141 chr3L 22744684 22744703 FB 30 12 4 19 '1-3 72.82 1.4 1.7 intron CG7369 + chr3L_4_22740001 chr3L_22740001 0.25 RAL-362_75b 142 chr3R 3596955 3597036 Transpac 2 311 9 81 '3-6 67.90 1.7 3.3 intergenic not near genes chr3R_9_3595001 chr3R_3595001 0.33 RAL-362_75b 143 chr3R 4721841 4721915 roo 8667 405 8 74 '6-2 66.27 1.5 3.2 intron Nep2 - chr3R_8_4720001 chr3R_4720001 0.75 RAL-362_75b 144 chr3R 5245585 5245649 1360 2 3380 8 64 '3-5 63.79 1.6 3.1 intron CG12163 - chr3R_8_5245001 chr3R_5245001 0.38 RAL-362_75b 145 chr3R 5800093 5800160 Stalker2 7637 7247 8 67 '3-5 66.31 0.8 4.4 intergenic CG10979 + chr3R_8_5800001 chr3R_5800001 0.38 RAL-362_75b 146 chr3R 7370077 7370140 297 6966 6590 4 63 '1-3 58.90 2.6 1.1 intergenic not near genes chr3R_4_7370001 chr3R_7370001 0.25 RAL-362_75b 147 chr3R 7416624 7416650 Tirant 33 8114 6 26 '3-3 65.97 1.8 2.1 intergenic not near genes chr3R_6_7415001 chr3R_7415001 0.50 RAL-362_75b 148 chr3R 7477459 7477479 BS 5013 4993 5 20 '2-3 62.40 1.4 2.1 intergenic not near genes chr3R_5_7475001 chr3R_7475001 0.40 RAL-362_75b 149 chr3R 7609760 7609802 roo 8685 391 6 42 '4-2 68.45 0.7 3.5 intron CG34127 - chr3R_6_7605001 chr3R_7605001 0.67 RAL-362_75b 150 chr3R 7646090 7646171 Tirant 8110 399 12 81 '4-8 66.04 2.7 3.2 intergenic not near genes chr3R_12_7645001 chr3R_7645001 0.33 RAL-362_75b 151 chr3R 7756809 7756876 hobo 1 2929 8 67 '7-1 62.65 1.5 3.2 intergenic not near genes chr3R_8_7755001 chr3R_7755001 0.88 RAL-362_75b 152 chr3R 7833120 7833143 Doc 11 34 6 23 '3-3 64.45 1.6 2.3 intron CG34384 + chr3R_6_7830001 chr3R_7830001 0.50 RAL-362_75b 153 chr3R 8027730 8027772 P-element 29 2883 6 42 '1-5 53.02 1.4 2.5 intron CG2747 - chr3R_6_8025001 chr3R_8025001 0.17 RAL-362_75b 154 chr3R 8585625 8585707 invader3 5186 279 8 82 '5-3 66.96 2.3 2.4 intron 5-HT2B + chr3R_8_8585001 chr3R_8585001 0.62 RAL-362_75b 155 chr3R 8765864 8765924 roo 410 8686 7 60 '5-2 61.25 1.8 2.5 intron,intron CG11768 -,CG34135 - chr3R_7_8765001 chr3R_8765001 0.71 RAL-362_75b 156 chr3R 8800466 8800525 3S18 6086 5767 4 59 '1-3 60.00 2.2 1.2 intron,intron Pif1A -,Pif1B - chr3R_4_8800001 chr3R_8800001 0.25 RAL-362_75b 157 chr3R 8860915 8860974 Transpac 4931 5218 4 59 '2-2 60.66 0.4 2.9 intron pyd - chr3R_4_8860001 chr3R_8860001 0.50 RAL-362_75b 158 chr3R 10912157 10912236 Burdock 6140 256 8 79 '5-3 67.09 1.3 3.5 intergenic not near genes chr3R_8_10910001 chr3R_10910001 0.62 RAL-362_75b 159 chr3R 11569164 11569190 P-element 32 2883 8 26 '4-4 46.95 0.6 5.0 intergenic Mrp4 + chr3R_8_11565001 chr3R_11565001 0.50 RAL-362_75b 160 chr3R 12727554 12727626 297 6965 6581 5 72 '2-3 70.30 1.3 2.2 intergenic CR44231 + chr3R_5_12725001 chr3R_12725001 0.40 RAL-362_75b 161 chr3R 12736680 12736746 roo 16 410 4 66 '1-3 62.66 2.0 1.3 intergenic not near genes chr3R_4_12735001 chr3R_12735001 0.25 RAL-362_75b 162 chr3R 13014208 13014266 pogo 10 2085 6 58 '4-2 60.22 1.7 2.2 intron CtBP + chr3R_6_13010001 chr3R_13010001 0.67 RAL-362_75b 163 chr3R 14044443 14044506 roo 18 409 5 63 '3-2 70.60 0.2 4.2 intergenic not near genes chr3R_5_14040001 chr3R_14040001 0.60 RAL-362_75b 164 chr3R 14049397 14049419 transib2 2799 2821 4 22 '2-2 62.00 1.0 2.0 intergenic not near genes chr3R_4_14045001 chr3R_14045001 0.50 RAL-362_75b 165 chr3R 14097050 14097118 transib2 9 2823 6 68 '3-3 63.00 2.3 1.8 intergenic CCHa1 -,CG9920 - chr3R_6_14095001 chr3R_14095001 0.50 RAL-362_75b 166 chr3R 14832272 14832349 roo 8663 405 12 77 '3-9 67.48 1.6 4.6 intron btsz - chr3R_12_14830001 chr3R_14830001 0.25 RAL-362_75b 167 chr3R 14849220 14849301 blood 379 7011 13 81 '7-6 66.39 1.3 5.7 intron btsz - chr3R_13_14845001 chr3R_14845001 0.54 RAL-362_75b 168 chr3R 14854544 14854601 Stalker4 386 6955 6 57 '2-4 67.56 1.1 2.9 intron btsz - chr3R_6_14850001 chr3R_14850001 0.33 RAL-362_75b 169 chr3R 14939521 14939586 opus 15 7499 5 65 '2-3 65.60 1.0 2.5 intergenic not near genes chr3R_5_14935001 chr3R_14935001 0.40 RAL-362_75b 170 chr3R 14987762 14987818 hobo 2930 11 4 56 '2-2 57.55 1.5 1.6 intergenic not near genes chr3R_4_14985001 chr3R_14985001 0.50 RAL-362_75b 171 chr3R 15158468 15158497 Stalker4 379 407 4 29 '3-1 64.24 1.7 1.5 intron Gyc88E + chr3R_4_15155001 chr3R_15155001 0.75 RAL-362_75b 172 chr3R 15524404 15524479 pogo 5 2098 5 75 '1-4 64.44 1.2 2.3 intergenic not near genes chr3R_5_15520001 chr3R_15520001 0.20 RAL-362_75b 173 chr3R 15676569 15676584 412 20 5 4 15 '2-2 56.86 1.6 1.5 intron pxb + chr3R_4_15675001 chr3R_15675001 0.50 RAL-362_75b 174 chr3R 15700717 15700781 roo 8663 395 7 64 '5-2 66.34 0.7 4.1 intergenic not near genes chr3R_7_15700001 chr3R_15700001 0.71 RAL-362_75b 175 chr3R 16611504 16611520 jockey 4694 4677 8 16 '4-4 54.93 1.5 3.2 3` UTR CG12783 - chr3R_8_16610001 chr3R_16610001 0.50 RAL-362_75b 176 chr3R 17362532 17362601 Stalker2 395 4 5 69 '3-2 57.89 1.0 2.5 intron beat-IIa - chr3R_5_17360001 chr3R_17360001 0.60 RAL-362_75b 177 chr3R 18159720 18159741 jockey 4681 4702 4 21 '2-2 60.51 5.1 0.7 3` UTR CR45104 - chr3R_4_18155001 chr3R_18155001 0.50 RAL-362_75b 178 chr3R 19468411 19468475 pogo 2099 14 7 64 '3-4 65.42 1.6 2.7 intron Dys + chr3R_7_19465001 chr3R_19465001 0.43 RAL-362_75b 179 chr3R 19950569 19950628 Burdock 6140 236 5 59 '2-3 66.47 2.0 1.7 intron Hs6st - chr3R_5_19950001 chr3R_19950001 0.40 RAL-362_75b 180 chr3R 20232949 20233026 copia 4870 253 7 77 '3-4 67.89 1.1 3.3 intron Nlg4 + chr3R_7_20230001 chr3R_20230001 0.43 RAL-362_75b 181 chr3R 20375310 20375326 Doc 19 3 5 16 '3-2 60.27 1.2 2.3 intergenic not near genes chr3R_5_20375001 chr3R_20375001 0.60 RAL-362_75b 182 chr3R 20580342 20580391 pogo 33 2099 7 49 '2-5 69.08 1.2 3.2 intron Srp14 + chr3R_7_20580001 chr3R_20580001 0.29 RAL-362_75b 183 chr3R 20685472 20685495 blood 7010 22 4 23 '1-3 65.33 1.0 2.0 intergenic not near genes chr3R_4_20685001 chr3R_20685001 0.25 RAL-362_75b 184 chr3R 20685851 20685926 Stalker4 400 6952 7 75 '6-1 57.61 1.2 3.2 intergenic not near genes chr3R_7_20685001 chr3R_20685001 0.86 RAL-362_75b 185 chr3R 20711189 20711208 roo 8662 18 4 19 '2-2 63.76 5.0 0.7 intron Oamb - chr3R_4_20710001 chr3R_20710001 0.50 RAL-362_75b 186 chr3R 20868000 20868050 jockey 138 4982 9 50 '7-2 58.78 1.8 3.2 intergenic not near genes chr3R_9_20865001 chr3R_20865001 0.78 RAL-362_75b 187 chr3R 21885014 21885095 HMS-Beagle 248 3 10 81 '3-7 63.33 1.9 3.4 exon CG17819 - chr3R_10_21885001 chr3R_21885001 0.30 RAL-362_75b 188 chr3R 22085279 22085358 roo 8664 407 5 79 '3-2 64.70 0.7 2.9 intergenic CG5778 - chr3R_5_22085001 chr3R_22085001 0.60 RAL-362_75b 189 chr3R 22511376 22511456 roo 8667 410 7 80 '4-3 63.64 0.1 6.4 intron Octbeta1R + chr3R_7_22510001 chr3R_22510001 0.57 RAL-362_75b 190 chr3R 22909859 22909876 mdg1 7445 7428 6 17 '3-3 64.82 0.8 3.3 intron klg + chr3R_6_22905001 chr3R_22905001 0.50 RAL-362_75b 191 chr3R 24557456 24557485 pogo 3 32 5 29 '2-3 68.80 3.5 1.1 3` UTR CG13624 - chr3R_5_24555001 chr3R_24555001 0.40 RAL-362_75b 192 chr3R 25289208 25289286 blood 5 7010 7 78 '4-3 66.23 1.2 3.2 intergenic CG13658 + chr3R_7_25285001 chr3R_25285001 0.57 RAL-362_75b 193 chr3R 25901481 25901523 412 474 7069 6 42 '3-3 56.44 2.3 1.8 exon CG31091 + chr3R_6_25900001 chr3R_25900001 0.50 RAL-362_75b 194 chr3R 26263150 26263169 copia 4 4892 4 19 '1-3 67.34 0.7 2.4 intron CG6154 + chr3R_4_26260001 chr3R_26260001 0.25 RAL-362_75b 195 chr3R 26569670 26569750 297 395 7 5 80 '3-2 61.20 1.7 1.9 intron scrib + chr3R_5_26565001 chr3R_26565001 0.60 RAL-362_75b 196 chr3R 26705124 26705196 1360 3384 3388 11 72 '6-5 66.03 1.9 3.8 intron amon - chr3R_11_26705001 chr3R_26705001 0.55 RAL-362_75b 197 chr3R 27720448 27720497 hobo 3 2914 7 49 '5-2 59.05 0.6 4.4 intergenic not near genes chr3R_7_27720001 chr3R_27720001 0.71 RAL-362_75b 198 chr3R 27782449 27782522 pogo 2092 2 6 73 '1-5 65.28 2.2 1.9 intron CG34353 - chr3R_6_27780001 chr3R_27780001 0.17 RAL-362_75b 199 chr3R 27989688 27989742 roo 8681 399 8 54 '3-5 66.27 2.1 2.6 intergenic CG4815 - chr3R_8_27985001 chr3R_27985001 0.38 RAL-362_75b 200 chr3R 28505316 28505375 hobo 9 2929 7 59 '4-3 66.21 2.0 2.3 intron Dhc98D + chr3R_7_28505001 chr3R_28505001 0.57 RAL-362_75b 201 chr3R 30520560 30520618 roo 6 392 5 58 '3-2 64.27 1.1 2.4 intron jdp - chr3R_5_30520001 chr3R_30520001 0.60 RAL-362_75b 202 chr3R 31310940 31310976 jockey 33 4982 7 36 '3-4 63.06 1.0 3.5 intergenic CG34347 + chr3R_7_31310001 chr3R_31310001 0.43 RAL-362_75b 203 chr4 311206 311224 1360 2 3368 4 18 '2-2 63.56 2.2 1.2 3` UTR Zip102B - chr4_4_310001 chr4_310001 0.50 RAL-362_75b 204 chr4 490523 490572 pogo 2080 13 4 49 '3-1 68.86 0.6 2.5 intergenic not near genes chr4_4_490001 chr4_490001 0.75 RAL-362_75b 205 chr4 1013040 1013091 I-element 5339 4 5 51 '3-2 64.00 1.0 2.5 3` UTR PlexA - chr4_5_1010001 chr4_1010001 0.60 RAL-362_75b 206 chrX 891656 891673 roo 9049 404 4 17 '3-1 58.07 1.1 1.9 intron CG43867 - chrX_4_890001 chrX_890001 0.75 RAL-362_75b 207 chrX 1621061 1621111 S-element 1685 1713 4 50 '2-2 70.66 0.6 2.5 intron,intron Mur2B -,br + chrX_4_1620001 chrX_1620001 0.50 RAL-362_75b 208 chrX 2745151 2745217 FB 4 7 4 66 '3-1 61.00 0.3 3.1 intron kirre + chrX_4_2745001 chrX_2745001 0.75 RAL-362_75b 209 chrX 2757621 2757695 mdg3 238 5251 8 74 '6-2 65.28 0.6 5.0 intron kirre + chrX_8_2755001 chrX_2755001 0.75 RAL-362_75b 210 chrX 4280378 4280453 copia 251 4869 8 75 '4-4 66.22 0.8 4.4 intergenic not near genes chrX_8_4280001 chrX_4280001 0.50 RAL-362_75b 211 chrX 4335405 4335447 hobo 2922 17 4 42 '1-3 59.03 0.9 2.1 intron norpA + chrX_4_4335001 chrX_4335001 0.25 RAL-362_75b 212 chrX 4758376 4758445 Tirant 3 8494 8 69 '5-3 66.46 1.3 3.5 intergenic not near genes chrX_8_4755001 chrX_4755001 0.62 RAL-362_75b 213 chrX 5182747 5182798 roo 405 25 4 51 '3-1 65.22 0.6 2.5 intron,intron CG15465 +,rg + chrX_4_5180001 chrX_5180001 0.75 RAL-362_75b 214 chrX 5185605 5185631 Doc 11 37 5 26 '3-2 62.93 2.8 1.3 intron,intron CG15465 +,rg + chrX_5_5185001 chrX_5185001 0.60 RAL-362_75b 215 chrX 6077191 6077239 HMS-Beagle 11 7020 5 48 '3-2 62.45 0.6 3.1 intron CG4666 - chrX_5_6075001 chrX_6075001 0.60 RAL-362_75b 216 chrX 9061196 9061264 1360 1 10 12 68 '8-4 64.85 0.8 6.7 intron CG15365 - chrX_12_9060001 chrX_9060001 0.67 RAL-362_75b 217 chrX 9432829 9432904 roo 8669 408 5 75 '1-4 70.45 0.8 2.8 intron mgl - chrX_5_9430001 chrX_9430001 0.20 RAL-362_75b 218 chrX 14523642 14523725 blood 7010 378 7 83 '4-3 65.33 1.1 3.3 intergenic not near genes chrX_7_14520001 chrX_14520001 0.57 RAL-362_75b 219 chrX 15841154 15841178 INE-1 141 165 5 24 '2-3 60.80 0.3 3.8 3` UTR CG8565 + chrX_5_15840001 chrX_15840001 0.40 RAL-362_75b 220 chrX 17505350 17505373 FB 5 28 4 23 '2-2 67.54 1.6 1.5 intron CG43658 - chrX_4_17505001 chrX_17505001 0.50 RAL-362_75b 221 chrX 18312176 18312226 roo 395 17 4 50 '1-3 65.67 0.2 3.3 intergenic CR45609 - chrX_4_18310001 chrX_18310001 0.25 RAL-362_75b 222 chrX 19360281 19360354 FB 3 1 4 73 '1-3 58.84 0.9 2.1 intron kek5 + chrX_4_19360001 chrX_19360001 0.25 RAL-362_75b 223 chrX 19459425 19459499 Stalker2 7254 7650 6 74 '1-5 64.22 0.6 3.8 intron kek5 + chrX_6_19455001 chrX_19455001 0.17 RAL-362_75b 224 chrX 19887087 19887165 P-element 13 16 7 78 '2-5 45.14 0.4 5.0 intron,exon Hers +,amn - chrX_7_19885001 chrX_19885001 0.29 RAL-362_75b 225 chrX 20594903 20594962 Tabor 487 24 5 59 '3-2 65.07 1.1 2.4 intron RunxA - chrX_5_20590001 chrX_20590001 0.60 RAL-362_75b 226 chrX 20977684 20977759 roo 405 8666 5 75 '4-1 65.01 0.8 2.8 intergenic not near genes chrX_5_20975001 chrX_20975001 0.80 RAL-362_75b 227 chrX 21399406 21399478 pogo 6 2098 4 72 '2-2 68.12 0.9 2.1 intergenic not near genes chrX_4_21395001 chrX_21395001 0.50 RAL-362_75b 228 chrX 21667903 21667925 gypsy2 32 6498 4 22 '3-1 67.80 0.0 4.0 intergenic not near genes chrX_4_21665001 chrX_21665001 0.75 RAL-362_75b 229 chrX 22218827 22218843 1731 4322 26 4 16 '2-2 60.75 0.0 4.0 intergenic not near genes chrX_4_22215001 chrX_22215001 0.50 RAL-362_75b