SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46357 46382 chr2L 46435 46460 4 78 0.0 0.0 0.0 4.0 103 chr2L 46357 intron Cda5 - chr2L 46408 intron Cda5 - chr2L 46460 intron Cda5 - chr2L_4_45001 chr2L_45001 RAL-362_75b 2 chr2L 47463 47484 chr2L 52568 52589 jockey 4 5105 1.0 1.0 1.0 2.0 5126 chr2L 47463 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52589 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-362_75b 3 chr2L 347887 347908 chr2L 355386 355408 blood 6 7500 1.0 0.0 0.5 4.0 7521 chr2L 347887 3` UTR Plc21C + chr2L 351648 intron Plc21C + chr2L 355408 3` UTR Plc21C + chr2L_6_350001 chr2L_350001 RAL-362_75b 4 chr2L 544836 544860 chr2L 544917 544943 5 83 1.0 0.0 0.5 3.3 107 chr2L 544836 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544890 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544943 3` UTR Ets21C - chr2L_5_540001 chr2L_540001 RAL-362_75b 5 chr2L 597173 597197 chr2L 597292 597315 4 118 6.5 6.0 6.2 0.6 142 chr2L 597173 intergenic not near genes chr2L 597244 intergenic not near genes chr2L 597315 intergenic not near genes chr2L_4_595001 chr2L_595001 RAL-362_75b 6 chr2L 769658 769672 chr2L 769893 769907 4 235 0.5 1.5 1.0 2.0 249 chr2L 769658 intergenic not near genes chr2L 769782 intergenic not near genes chr2L 769907 intergenic not near genes chr2L_4_765001 chr2L_765001 RAL-362_75b 7 chr2L 795263 795285 chr2L 795373 795395 6 110 1.5 0.0 0.8 3.3 132 chr2L 795263 intergenic not near genes chr2L 795329 intergenic not near genes chr2L 795395 intergenic not near genes chr2L_6_795001 chr2L_795001 RAL-362_75b 8 chr2L 922469 922494 chr2L 922550 922575 6 81 0.5 1.0 0.8 3.3 106 chr2L 922469 intergenic CG4341 + chr2L 922522 intergenic CG4341 + chr2L 922575 intergenic CG4341 + chr2L_6_920001 chr2L_920001 RAL-362_75b 9 chr2L 923525 923550 chr2L 923709 923734 4 184 1.5 2.5 2.0 1.3 209 chr2L 923525 intron CG4341 + chr2L 923630 intron CG4341 + chr2L 923734 intron CG4341 + chr2L_4_920001 chr2L_920001 RAL-362_75b 10 chr2L 1220127 1220136 chr2L 1227593 1227602 blood 4 7466 1.5 0.0 0.8 2.2 7475 chr2L 1220127 intron CG42329 + chr2L 1223864 intron CG42329 + chr2L 1227602 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-362_75b 11 chr2L 1348491 1348522 chr2L 1348702 1348733 4 210 1.0 1.5 1.2 1.8 242 chr2L 1348491 intergenic not near genes chr2L 1348612 intergenic not near genes chr2L 1348733 intergenic not near genes chr2L_4_1345001 chr2L_1345001 RAL-362_75b 12 chr2L 1711358 1711387 chr2L 1711682 1711711 mdg3 5 324 1.0 1.0 1.0 2.5 353 chr2L 1711358 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711711 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-362_75b 13 chr2L 2100386 2100408 chr2L 2109537 2109559 roo 6 9151 2.5 2.0 2.2 1.9 9173 chr2L 2100386 intron dpr3 - chr2L 2104972 intron dpr3 - chr2L 2109559 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-362_75b 14 chr2L 2112119 2112143 chr2L 2119778 2119805 opus 6 7661 0.0 1.0 0.5 4.0 7686 chr2L 2112119 intergenic not near genes chr2L 2115962 intergenic not near genes chr2L 2119805 intergenic not near genes chr2L_6_2115001 chr2L_2115001 RAL-362_75b 15 chr2L 2380447 2380464 chr2L 2380522 2380540 4 76 1.5 0.0 0.8 2.2 93 chr2L 2380447 3` UTR Atxn7 + chr2L 2380494 3` UTR Atxn7 + chr2L 2380540 intergenic Atxn7 + chr2L_4_2380001 chr2L_2380001 RAL-362_75b 16 chr2L 2618038 2618065 chr2L 2618116 2618144 4 78 1.0 0.0 0.5 2.7 106 chr2L 2618038 intergenic not near genes chr2L 2618091 intergenic not near genes chr2L 2618144 intergenic not near genes chr2L_4_2615001 chr2L_2615001 RAL-362_75b 17 chr2L 2833009 2833042 chr2L 2833102 2833135 5 93 0.5 2.0 1.2 2.3 126 chr2L 2833009 intergenic not near genes chr2L 2833072 intergenic not near genes chr2L 2833135 intergenic not near genes chr2L_5_2830001 chr2L_2830001 RAL-362_75b 18 chr2L 3073031 3073060 chr2L 3078234 3078263 copia 5 5203 2.5 1.0 1.8 1.8 5232 chr2L 3073031 intron toc - chr2L 3075647 intron toc - chr2L 3078263 intron toc - chr2L_5_3075001 chr2L_3075001 RAL-362_75b 19 chr2L 3251497 3251525 chr2L 3259062 3259089 springer 4 7565 1.0 2.0 1.5 1.6 7592 chr2L 3251497 intergenic not near genes chr2L 3255293 intergenic not near genes chr2L 3259089 intergenic not near genes chr2L_4_3255001 chr2L_3255001 RAL-362_75b 20 chr2L 3950086 3950101 chr2L 3950162 3950177 4 76 2.5 1.0 1.8 1.4 91 chr2L 3950086 intron fred - chr2L 3950132 intron fred - chr2L 3950177 intron fred - chr2L_4_3950001 chr2L_3950001 RAL-362_75b 21 chr2L 4014659 4014666 chr2L 4014802 4014806 4 142 2.0 2.0 2.0 1.3 147 chr2L 4014659 intergenic not near genes chr2L 4014732 intergenic not near genes chr2L 4014806 intergenic not near genes chr2L_4_4010001 chr2L_4010001 RAL-362_75b 22 chr2L 4116790 4116814 chr2L 4116866 4116889 5 75 2.5 0.5 1.5 2.0 99 chr2L 4116790 intergenic not near genes chr2L 4116840 intergenic not near genes chr2L 4116889 intergenic not near genes chr2L_5_4115001 chr2L_4115001 RAL-362_75b 23 chr2L 4173876 4173887 chr2L 4174309 4174319 5 432 2.0 1.0 1.5 2.0 443 chr2L 4173876 intergenic not near genes chr2L 4174098 intergenic not near genes chr2L 4174319 intergenic not near genes chr2L_5_4170001 chr2L_4170001 RAL-362_75b 24 chr2L 4601724 4601733 chr2L 4609164 4609171 mdg1 4 7440 0.5 4.5 2.5 1.1 7447 chr2L 4601724 intron dp - chr2L 4605448 intron dp - chr2L 4609171 intron dp - chr2L_4_4605001 chr2L_4605001 RAL-362_75b 25 chr2L 4748691 4748722 chr2L 4748770 4748800 6 78 1.0 2.0 1.5 2.4 109 chr2L 4748691 intron CG15630 - chr2L 4748746 intron CG15630 - chr2L 4748800 intron CG15630 - chr2L_6_4745001 chr2L_4745001 RAL-362_75b 26 chr2L 4789776 4789808 chr2L 4789972 4790004 4 195 0.0 0.0 0.0 4.0 228 chr2L 4789776 intron CG15630 - chr2L 4789890 intron CG15630 - chr2L 4790004 intron CG15630 - chr2L_4_4785001 chr2L_4785001 RAL-362_75b 27 chr2L 4918165 4918200 chr2L 4923238 4923273 jockey 4 5072 0.5 1.0 0.8 2.2 5108 chr2L 4918165 intron hoe1 - chr2L 4920719 intron hoe1 - chr2L 4923273 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-362_75b 28 chr2L 4953521 4953538 chr2L 4953759 4953779 pogo 6 240 0.5 1.0 0.8 3.3 258 chr2L 4953521 intergenic Jon25Bii - chr2L 4953650 intergenic not near genes chr2L 4953779 intergenic Jon25Bi - chr2L_6_4950001 chr2L_4950001 RAL-362_75b 29 chr2L 4996098 4996117 chr2L 4996175 4996194 4 77 2.0 1.0 1.5 1.6 96 chr2L 4996098 intron Rtnl1 - chr2L 4996146 intron Rtnl1 - chr2L 4996194 intron Rtnl1 - chr2L_4_4995001 chr2L_4995001 RAL-362_75b 30 chr2L 5027963 5027992 chr2L 5028047 5028076 7 84 1.0 2.0 1.5 2.8 113 chr2L 5027963 intron vkg - chr2L 5028020 intron vkg - chr2L 5028076 intron vkg - chr2L_7_5025001 chr2L_5025001 RAL-362_75b 31 chr2L 5242936 5242937 chr2L 16217660 16217660 6 10974724 6.0 8.5 7.2 0.7 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_6_10730001 chr2L_10730001 RAL-362_75b 32 chr2L 5342770 5342798 chr2L 5345150 5345178 Doc 4 2380 1.5 1.0 1.2 1.8 2408 chr2L 5342770 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345178 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-362_75b 33 chr2L 5582220 5582226 chr2L 5582296 5582302 4 76 1.0 0.5 0.8 2.2 82 chr2L 5582220 intergenic not near genes chr2L 5582261 intergenic not near genes chr2L 5582302 intergenic not near genes chr2L_4_5580001 chr2L_5580001 RAL-362_75b 34 chr2L 5588779 5588804 chr2L 5589183 5589208 7 404 1.5 2.0 1.8 2.5 429 chr2L 5588779 intergenic CG7251 - chr2L 5588994 intergenic not near genes chr2L 5589208 intergenic not near genes chr2L_7_5585001 chr2L_5585001 RAL-362_75b 35 chr2L 5594318 5594350 chr2L 5594410 5594442 9 92 1.5 1.0 1.2 4.1 124 chr2L 5594318 intergenic not near genes chr2L 5594380 intergenic not near genes chr2L 5594442 intergenic not near genes chr2L_9_5590001 chr2L_5590001 RAL-362_75b 36 chr2L 6110323 6110347 chr2L 6110404 6110426 5 81 0.5 1.0 0.8 2.8 103 chr2L 6110323 intron stai + chr2L 6110374 intron stai + chr2L 6110426 intron stai + chr2L_5_6110001 chr2L_6110001 RAL-362_75b 37 chr2L 6426860 6426887 chr2L 6445117 6445147 roo 5 18259 1.5 1.0 1.2 2.3 18287 chr2L 6426860 3` UTR CG9527 - chr2L 6436004 intron CG9527 - chr2L 6445147 exon CG9527 - chr2L_5_6435001 chr2L_6435001 RAL-362_75b 38 chr2L 6544371 6544393 chr2L 6544463 6544485 4 92 1.0 1.5 1.2 1.8 114 chr2L 6544371 intron eya - chr2L 6544428 intron eya - chr2L 6544485 intron eya - chr2L_4_6540001 chr2L_6540001 RAL-362_75b 39 chr2L 6609122 6609158 chr2L 6609253 6609289 7 131 0.0 0.5 0.2 5.8 167 chr2L 6609122 intergenic not near genes chr2L 6609206 intergenic not near genes chr2L 6609289 intergenic not near genes chr2L_7_6605001 chr2L_6605001 RAL-362_75b 40 chr2L 6740743 6740760 chr2L 6740830 6740847 4 87 0.0 2.5 1.2 1.8 104 chr2L 6740743 intergenic not near genes chr2L 6740795 intergenic not near genes chr2L 6740847 intergenic not near genes chr2L_4_6740001 chr2L_6740001 RAL-362_75b 41 chr2L 6836502 6836534 chr2L 6836584 6836616 5 82 0.0 1.5 0.8 2.8 114 chr2L 6836502 intron sens-2 + chr2L 6836559 intron sens-2 + chr2L 6836616 intron sens-2 + chr2L_5_6835001 chr2L_6835001 RAL-362_75b 42 chr2L 6969280 6969303 chr2L 6969360 6969383 5 80 1.0 1.5 1.2 2.3 103 chr2L 6969280 3` UTR snRNP-U1-70K - chr2L 6969332 3` UTR snRNP-U1-70K - chr2L 6969383 3` UTR snRNP-U1-70K - chr2L_5_6965001 chr2L_6965001 RAL-362_75b 43 chr2L 7081705 7081726 chr2L 7081786 7081807 4 81 1.5 0.5 1.0 2.0 102 chr2L 7081705 intron Pvf2 - chr2L 7081756 intron Pvf2 - chr2L 7081807 intron Pvf2 - chr2L_4_7080001 chr2L_7080001 RAL-362_75b 44 chr2L 7609534 7609737 chr2L 7609629 7609814 5 84 2.0 0.0 1.0 2.5 280 chr2L 7609534 intron CG6739 + chr2L 7609674 intron CG6739 + chr2L 7609814 intron CG6739 + chr2L_5_7605001 chr2L_7605001 RAL-362_75b 45 chr2L 7841284 7841314 chr2L 7841470 7841498 7 185 0.0 0.5 0.2 5.8 214 chr2L 7841284 intergenic CG14537 + chr2L 7841391 intergenic CG14537 + chr2L 7841498 intergenic CG14537 + chr2L_7_7840001 chr2L_7840001 RAL-362_75b 46 chr2L 8184922 8184949 chr2L 8185013 8185040 7 91 1.0 2.5 1.8 2.5 118 chr2L 8184922 intron Piezo + chr2L 8184981 intron Piezo + chr2L 8185040 intron Piezo + chr2L_7_8180001 chr2L_8180001 RAL-362_75b 47 chr2L 8258165 8258191 chr2L 8258262 8258288 4 97 1.5 0.5 1.0 2.0 123 chr2L 8258165 intergenic Btk29A -,mir-2b-1 - chr2L 8258226 intergenic Btk29A -,mir-2b-1 - chr2L 8258288 intergenic Btk29A -,mir-2b-1 - chr2L_4_8255001 chr2L_8255001 RAL-362_75b 48 chr2L 8452422 8452445 chr2L 8461593 8461616 roo 4 9170 3.5 2.0 2.8 1.1 9194 chr2L 8452422 intron fu12 - chr2L 8457019 intron fu12 - chr2L 8461616 intron fu12 - chr2L_4_8455001 chr2L_8455001 RAL-362_75b 49 chr2L 8461861 8461872 chr2L 8461942 8461953 4 81 1.0 1.0 1.0 2.0 92 chr2L 8461861 intron fu12 - chr2L 8461907 intron fu12 - chr2L 8461953 intron fu12 - chr2L_4_8460001 chr2L_8460001 RAL-362_75b 50 chr2L 9084339 9084340 chr2L 16217660 16217660 7 7133321 2.5 8.5 5.5 1.1 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_12650001 chr2L_12650001 RAL-362_75b 51 chr2L 9202056 9202088 chr2L 9202132 9202164 8 76 1.0 1.0 1.0 4.0 108 chr2L 9202056 intron tai + chr2L 9202110 intron tai + chr2L 9202164 intron tai + chr2L_8_9200001 chr2L_9200001 RAL-362_75b 52 chr2L 9264356 9264374 chr2L 9264455 9264474 4 100 0.5 2.0 1.2 1.8 118 chr2L 9264356 intron Ggamma30A + chr2L 9264415 intron Ggamma30A + chr2L 9264474 intron Ggamma30A + chr2L_4_9260001 chr2L_9260001 RAL-362_75b 53 chr2L 9270737 9270764 chr2L 9270831 9270859 5 95 2.5 1.5 2.0 1.7 122 chr2L 9270737 intron Ggamma30A + chr2L 9270798 intron Ggamma30A + chr2L 9270859 intron Ggamma30A + chr2L_5_9270001 chr2L_9270001 RAL-362_75b 54 chr2L 9297384 9297405 chr2L 9297461 9297482 5 77 2.0 0.5 1.2 2.3 98 chr2L 9297384 3` UTR Ggamma30A + chr2L 9297433 3` UTR Ggamma30A + chr2L 9297482 3` UTR Ggamma30A + chr2L_5_9295001 chr2L_9295001 RAL-362_75b 55 chr2L 9321734 9321751 chr2L 9321810 9321827 4 76 0.5 1.5 1.0 2.0 93 chr2L 9321734 intergenic not near genes chr2L 9321780 intergenic not near genes chr2L 9321827 intergenic not near genes chr2L_4_9320001 chr2L_9320001 RAL-362_75b 56 chr2L 9490521 9490541 chr2L 9490601 9490621 4 80 0.0 1.5 0.8 2.2 100 chr2L 9490521 intergenic not near genes chr2L 9490571 intergenic not near genes chr2L 9490621 intergenic not near genes chr2L_4_9490001 chr2L_9490001 RAL-362_75b 57 chr2L 9593367 9593393 chr2L 9593449 9593475 4 82 0.5 2.5 1.5 1.6 108 chr2L 9593367 intergenic not near genes chr2L 9593421 intergenic not near genes chr2L 9593475 intergenic not near genes chr2L_4_9590001 chr2L_9590001 RAL-362_75b 58 chr2L 10051725 10051744 chr2L 10051810 10051829 7 85 2.0 1.0 1.5 2.8 104 chr2L 10051725 5` UTR CR44874 + chr2L 10051777 5` UTR CR44874 + chr2L 10051829 5` UTR CR44874 + chr2L_7_10050001 chr2L_10050001 RAL-362_75b 59 chr2L 10153212 10153238 chr2L 10153291 10153316 8 79 1.0 1.5 1.2 3.6 104 chr2L 10153212 intron,exon CG44153 -,CG4839 + chr2L 10153264 intron,intron CG44153 -,CG4839 + chr2L 10153316 intron,intron CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-362_75b 60 chr2L 10204516 10204533 chr2L 10204599 10204616 4 82 0.0 1.0 0.5 2.7 100 chr2L 10204516 intergenic CG34159 -,CG5734 - chr2L 10204566 intergenic CG5734 -,CG34159 - chr2L 10204616 intergenic CG5734 -,CG34159 - chr2L_4_10200001 chr2L_10200001 RAL-362_75b 61 chr2L 10232934 10232945 chr2L 10233011 10233023 4 78 0.0 0.0 0.0 4.0 89 chr2L 10232934 intron eEF1delta + chr2L 10232978 intron eEF1delta + chr2L 10233023 intron eEF1delta + chr2L_4_10230001 chr2L_10230001 RAL-362_75b 62 chr2L 10278021 10278038 chr2L 10278101 10278118 4 80 1.0 1.0 1.0 2.0 97 chr2L 10278021 intron Utx - chr2L 10278070 intron Utx - chr2L 10278118 intron Utx - chr2L_4_10275001 chr2L_10275001 RAL-362_75b 63 chr2L 10490285 10490304 chr2L 10490366 10490386 4 82 1.5 1.0 1.2 1.8 101 chr2L 10490285 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490336 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490386 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_4_10490001 chr2L_10490001 RAL-362_75b 64 chr2L 10586521 10586537 chr2L 10586601 10586619 4 81 1.5 0.0 0.8 2.2 98 chr2L 10586521 intron Trim9 + chr2L 10586570 intron Trim9 + chr2L 10586619 intron Trim9 + chr2L_4_10585001 chr2L_10585001 RAL-362_75b 65 chr2L 10701821 10701842 chr2L 10701906 10701928 4 86 1.0 0.0 0.5 2.7 107 chr2L 10701821 intergenic Lip2 -,Lip1 - chr2L 10701874 intergenic Lip2 -,Lip1 - chr2L 10701928 intergenic Lip2 -,Lip1 - chr2L_4_10700001 chr2L_10700001 RAL-362_75b 66 chr2L 10762415 10762429 chr2L 10762490 10762506 4 76 0.0 2.5 1.2 1.8 91 chr2L 10762415 intron CG6495 + chr2L 10762460 intron CG6495 + chr2L 10762506 intron CG6495 + chr2L_4_10760001 chr2L_10760001 RAL-362_75b 67 chr2L 10862844 10862863 chr2L 10864458 10864477 Rt1c 6 1614 2.0 0.5 1.2 2.7 1633 chr2L 10862844 3` UTR CR43807 - chr2L 10863660 intron CR43807 - chr2L 10864477 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-362_75b 68 chr2L 10946946 10946965 chr2L 10956161 10956180 roo 4 9215 3.5 1.0 2.2 1.2 9234 chr2L 10946946 intron dpr2 - chr2L 10951563 intron dpr2 - chr2L 10956180 intron dpr2 - chr2L_4_10950001 chr2L_10950001 RAL-362_75b 69 chr2L 11255315 11255344 chr2L 11255403 11255431 5 88 2.5 2.0 2.2 1.6 116 chr2L 11255315 intron ab + chr2L 11255373 intron ab + chr2L 11255431 intron ab + chr2L_5_11255001 chr2L_11255001 RAL-362_75b 70 chr2L 11598207 11598219 chr2L 11598348 11598360 5 141 0.0 2.0 1.0 2.5 153 chr2L 11598207 intron kek2 + chr2L 11598284 intron kek2 + chr2L 11598360 intron kek2 + chr2L_5_11595001 chr2L_11595001 RAL-362_75b 71 chr2L 11612684 11612695 chr2L 11612772 11612782 4 88 3.0 2.0 2.5 1.1 98 chr2L 11612684 intron kek2 + chr2L 11612733 intron kek2 + chr2L 11612782 intron kek2 + chr2L_4_11610001 chr2L_11610001 RAL-362_75b 72 chr2L 11770609 11770632 chr2L 11770695 11770717 5 86 1.5 1.0 1.2 2.3 108 chr2L 11770609 intergenic not near genes chr2L 11770663 intergenic not near genes chr2L 11770717 intergenic not near genes chr2L_5_11770001 chr2L_11770001 RAL-362_75b 73 chr2L 12179816 12179838 chr2L 12180533 12180555 5 717 0.5 0.5 0.5 3.3 739 chr2L 12179816 intron aret + chr2L 12180186 intron aret + chr2L 12180555 intron aret + chr2L_5_12180001 chr2L_12180001 RAL-362_75b 74 chr2L 12487885 12487920 chr2L 12487966 12488000 11 81 0.0 0.5 0.2 9.2 115 chr2L 12487885 intron bun - chr2L 12487942 intron bun - chr2L 12488000 intron bun - chr2L_11_12485001 chr2L_12485001 RAL-362_75b 75 chr2L 12558327 12558350 chr2L 12565456 12565479 HMS-Beagle 4 7129 0.5 1.0 0.8 2.2 7152 chr2L 12558327 intergenic not near genes chr2L 12561903 intergenic not near genes chr2L 12565479 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-362_75b 76 chr2L 12736830 12736865 chr2L 12737227 12737257 4 396 2.0 2.5 2.2 1.2 427 chr2L 12736830 intron MRP + chr2L 12737044 intron MRP + chr2L 12737257 intron MRP + chr2L_4_12735001 chr2L_12735001 RAL-362_75b 77 chr2L 12791603 12791630 chr2L 12795278 12795305 F-element 5 3675 1.5 1.0 1.2 2.3 3702 chr2L 12791603 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795305 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-362_75b 78 chr2L 12894020 12894046 chr2L 12895487 12895509 hobo 5 1466 0.0 1.5 0.8 2.8 1489 chr2L 12894020 intergenic not near genes chr2L 12894764 intergenic not near genes chr2L 12895509 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-362_75b 79 chr2L 13152231 13152252 chr2L 13152309 13152330 4 78 1.5 1.0 1.2 1.8 99 chr2L 13152231 intergenic not near genes chr2L 13152280 intergenic not near genes chr2L 13152330 intergenic not near genes chr2L_4_13150001 chr2L_13150001 RAL-362_75b 80 chr2L 13248935 13248951 chr2L 13249015 13249032 6 81 1.0 1.0 1.0 3.0 97 chr2L 13248935 intron CG16820 + chr2L 13248984 intron CG16820 + chr2L 13249032 intron CG16820 + chr2L_6_13245001 chr2L_13245001 RAL-362_75b 81 chr2L 13405655 13405674 chr2L 13410452 13410471 Doc 8 4797 1.0 2.5 1.8 2.9 4816 chr2L 13405655 exon CG7110 + chr2L 13408063 intron CG7110 + chr2L 13410471 intron CG7110 + chr2L_8_13405001 chr2L_13405001 RAL-362_75b 82 chr2L 13761823 13761836 chr2L 13762933 13762944 Doc 4 1110 1.0 2.0 1.5 1.6 1121 chr2L 13761823 intron TM9SF4 + chr2L 13762384 intron TM9SF4 + chr2L 13762944 intron TM9SF4 + chr2L_4_13760001 chr2L_13760001 RAL-362_75b 83 chr2L 13853100 13853116 chr2L 13862250 13862266 roo 5 9150 1.5 1.0 1.2 2.3 9166 chr2L 13853100 intron CenG1A + chr2L 13857683 intron CenG1A + chr2L 13862266 intron CenG1A + chr2L_5_13855001 chr2L_13855001 RAL-362_75b 84 chr2L 13977793 13977810 chr2L 13978121 13978138 6 328 2.0 0.0 1.0 3.0 345 chr2L 13977793 exon Cyp28a5 + chr2L 13977966 intron Cyp28a5 + chr2L 13978138 intron Cyp28a5 + chr2L_6_13975001 chr2L_13975001 RAL-362_75b 85 chr2L 14160693 14160719 chr2L 14160779 14160805 4 86 0.5 0.5 0.5 2.7 112 chr2L 14160693 intergenic CG17341 +,CG43332 - chr2L 14160749 intergenic CG17341 +,CG43332 - chr2L 14160805 intergenic CG17341 +,CG43332 - chr2L_4_14160001 chr2L_14160001 RAL-362_75b 86 chr2L 14564202 14564230 chr2L 14564277 14564306 4 76 1.5 0.5 1.0 2.0 104 chr2L 14564202 intergenic CG3473 - chr2L 14564254 intergenic not near genes chr2L 14564306 intergenic not near genes chr2L_4_14560001 chr2L_14560001 RAL-362_75b 87 chr2L 14569661 14569686 chr2L 14569749 14569775 8 89 0.5 0.0 0.2 6.7 114 chr2L 14569661 intergenic not near genes chr2L 14569718 intergenic not near genes chr2L 14569775 intergenic not near genes chr2L_8_14565001 chr2L_14565001 RAL-362_75b 88 chr2L 14694255 14694290 chr2L 14694379 14694414 4 124 0.0 0.0 0.0 4.0 159 chr2L 14694255 intergenic not near genes chr2L 14694334 intergenic not near genes chr2L 14694414 intergenic not near genes chr2L_4_14690001 chr2L_14690001 RAL-362_75b 89 chr2L 14803886 14803908 chr2L 14809089 14809111 copia 6 5202 1.0 2.0 1.5 2.4 5225 chr2L 14803886 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809111 intergenic not near genes chr2L_6_14805001 chr2L_14805001 RAL-362_75b 90 chr2L 15026022 15026036 chr2L 15026103 15026116 4 81 2.5 0.0 1.2 1.8 94 chr2L 15026022 exon GABA-B-R1 + chr2L 15026069 intron GABA-B-R1 + chr2L 15026116 intron GABA-B-R1 + chr2L_4_15025001 chr2L_15025001 RAL-362_75b 91 chr2L 15307969 15307981 chr2L 15308045 15308056 4 76 0.0 0.5 0.2 3.3 87 chr2L 15307969 intergenic not near genes chr2L 15308012 intergenic not near genes chr2L 15308056 intergenic not near genes chr2L_4_15305001 chr2L_15305001 RAL-362_75b 92 chr2L 15574988 15575008 chr2L 15575397 15575418 4 410 1.0 2.0 1.5 1.6 430 chr2L 15574988 intron kek3 + chr2L 15575203 intron kek3 + chr2L 15575418 intron kek3 + chr2L_4_15575001 chr2L_15575001 RAL-362_75b 93 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 6 145889 7.0 8.5 7.8 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-362_75b 94 chr2L 9084339 9084340 chr2L 16217660 16217660 7 7133320 2.5 8.5 5.5 1.1 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_12650001 chr2L_12650001 RAL-362_75b 95 chr2L 16217660 16217660 chr2L 18622718 18622719 4 2405058 5.5 3.5 4.5 0.7 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_4_17420001 chr2L_17420001 RAL-362_75b 96 chr2L 16280270 16280287 chr2L 16281441 16281455 1360 5 1170 1.0 1.0 1.0 2.5 1185 chr2L 16280270 intron crp - chr2L 16280862 intron crp - chr2L 16281455 intron crp - chr2L_5_16280001 chr2L_16280001 RAL-362_75b 97 chr2L 16388901 16388921 chr2L 16388979 16388999 6 77 0.5 3.0 1.8 2.1 98 chr2L 16388901 intergenic not near genes chr2L 16388950 intergenic not near genes chr2L 16388999 intergenic not near genes chr2L_6_16385001 chr2L_16385001 RAL-362_75b 98 chr2L 16535251 16535279 chr2L 16535371 16535399 5 120 0.0 0.5 0.2 4.2 148 chr2L 16535251 intergenic CR45355 - chr2L 16535325 intergenic CR45355 - chr2L 16535399 intergenic CR45355 - chr2L_5_16535001 chr2L_16535001 RAL-362_75b 99 chr2L 17005413 17005427 chr2L 17005510 17005524 4 97 1.0 0.0 0.5 2.7 111 chr2L 17005413 intergenic not near genes chr2L 17005468 intergenic not near genes chr2L 17005524 intergenic not near genes chr2L_4_17005001 chr2L_17005001 RAL-362_75b 100 chr2L 17273202 17273220 chr2L 17277984 17278002 F-element 7 4782 1.0 0.5 0.8 3.9 4800 chr2L 17273202 intergenic not near genes chr2L 17275602 intergenic not near genes chr2L 17278002 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-362_75b 101 chr2L 17353058 17353077 chr2L 17353136 17353155 4 78 0.5 0.0 0.2 3.3 97 chr2L 17353058 intergenic not near genes chr2L 17353106 intergenic not near genes chr2L 17353155 intergenic not near genes chr2L_4_17350001 chr2L_17350001 RAL-362_75b 102 chr2L 17543599 17543623 chr2L 17543691 17543715 4 92 2.0 0.5 1.2 1.8 116 chr2L 17543599 intergenic not near genes chr2L 17543657 intergenic not near genes chr2L 17543715 intergenic not near genes chr2L_4_17540001 chr2L_17540001 RAL-362_75b 103 chr2L 17805514 17805543 chr2L 17805656 17805685 5 142 1.0 1.0 1.0 2.5 171 chr2L 17805514 intron CadN2 - chr2L 17805600 intron CadN2 - chr2L 17805685 intron CadN2 - chr2L_5_17805001 chr2L_17805001 RAL-362_75b 104 chr2L 17893684 17893708 chr2L 17899689 17899714 4 6005 9.5 4.5 7.0 0.5 6030 chr2L 17893684 intergenic CR43420 + chr2L 17896699 intergenic not near genes chr2L 17899714 intergenic not near genes chr2L_4_17895001 chr2L_17895001 RAL-362_75b 105 chr2L 17944128 17944143 chr2L 17944206 17944221 4 78 1.0 0.0 0.5 2.7 93 chr2L 17944128 intergenic not near genes chr2L 17944174 intergenic not near genes chr2L 17944221 intergenic not near genes chr2L_4_17940001 chr2L_17940001 RAL-362_75b 106 chr2L 17951948 17951980 chr2L 17953415 17953447 hobo 6 1467 1.0 0.5 0.8 3.3 1499 chr2L 17951948 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953447 intergenic not near genes chr2L_6_17950001 chr2L_17950001 RAL-362_75b 107 chr2L 18078276 18078302 chr2L 18078361 18078388 4 86 2.0 1.0 1.5 1.6 112 chr2L 18078276 5` UTR Arr1 + chr2L 18078332 5` UTR Arr1 + chr2L 18078388 exon Arr1 + chr2L_4_18075001 chr2L_18075001 RAL-362_75b 108 chr2L 18573638 18573646 chr2L 18573960 18573968 4 322 3.5 8.5 6.0 0.6 330 chr2L 18573638 intron Pde11 - chr2L 18573803 intron Pde11 - chr2L 18573968 intron Pde11 - chr2L_4_18570001 chr2L_18570001 RAL-362_75b 109 chr2L 18784717 18784743 chr2L 18784969 18784995 4 252 0.0 1.5 0.8 2.2 278 chr2L 18784717 intron ham - chr2L 18784856 intron ham - chr2L 18784995 intron ham - chr2L_4_18780001 chr2L_18780001 RAL-362_75b 110 chr2L 18898398 18898427 chr2L 18898480 18898509 7 82 1.0 0.0 0.5 4.7 111 chr2L 18898398 intergenic not near genes chr2L 18898454 intergenic not near genes chr2L 18898509 intergenic not near genes chr2L_7_18895001 chr2L_18895001 RAL-362_75b 111 chr2L 19345015 19345039 chr2L 19357223 19357248 blood 6 12209 0.0 2.0 1.0 3.0 12233 chr2L 19345015 intron dnt - chr2L 19351132 intron dnt - chr2L 19357248 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-362_75b 112 chr2L 19562545 19562561 chr2L 19562625 19562641 5 80 0.0 1.5 0.8 2.8 96 chr2L 19562545 intron Tep5 + chr2L 19562593 intron Tep5 + chr2L 19562641 exon Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-362_75b 113 chr2L 19620089 19620132 chr2L 19621078 19621121 jockey 6 989 1.5 2.0 1.8 2.1 1032 chr2L 19620089 intron Lar + chr2L 19620605 intron Lar + chr2L 19621121 intron Lar + chr2L_6_19620001 chr2L_19620001 RAL-362_75b 114 chr2L 19737356 19737381 chr2L 19740824 19740849 1360 4 3468 1.5 0.5 1.0 2.0 3493 chr2L 19737356 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740849 intergenic not near genes chr2L_4_19735001 chr2L_19735001 RAL-362_75b 115 chr2L 19786342 19786366 chr2L 19786493 19786517 4 151 0.0 1.0 0.5 2.7 175 chr2L 19786342 intron CdGAPr - chr2L 19786430 intron CdGAPr - chr2L 19786517 intron CdGAPr - chr2L_4_19785001 chr2L_19785001 RAL-362_75b 116 chr2L 19907381 19907411 chr2L 19907484 19907515 6 103 0.0 0.0 0.0 6.0 134 chr2L 19907381 intron sick + chr2L 19907448 intron sick + chr2L 19907515 intron sick + chr2L_6_19905001 chr2L_19905001 RAL-362_75b 117 chr2L 19911303 19911313 chr2L 19911391 19911401 4 88 1.0 1.5 1.2 1.8 98 chr2L 19911303 intron,3` UTR sick +,CR43097 - chr2L 19911352 intron,3` UTR sick +,CR43097 - chr2L 19911401 intron,3` UTR sick +,CR43097 - chr2L_4_19910001 chr2L_19910001 RAL-362_75b 118 chr2L 20005883 20005899 chr2L 20010959 20010975 flea 4 5076 0.5 1.0 0.8 2.2 5092 chr2L 20005883 intron CG43861 - chr2L 20008429 intron CG43861 - chr2L 20010975 intron CG43861 - chr2L_4_20005001 chr2L_20005001 RAL-362_75b 119 chr2L 20296520 20296530 chr2L 20296601 20296611 4 81 0.0 1.5 0.8 2.2 91 chr2L 20296520 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296611 intergenic CR43414 - chr2L_4_20295001 chr2L_20295001 RAL-362_75b 120 chr2L 20576218 20576240 chr2L 20583686 20583707 blood 6 7468 0.0 0.5 0.2 5.0 7489 chr2L 20576218 intergenic CR45347 + chr2L 20579962 intergenic not near genes chr2L 20583707 3` UTR CR44909 - chr2L_6_20575001 chr2L_20575001 RAL-362_75b 121 chr2L 20792601 20792628 chr2L 20792716 20792742 6 115 0.0 0.5 0.2 5.0 141 chr2L 20792601 intron vari - chr2L 20792672 intron vari - chr2L 20792742 intron vari - chr2L_6_20790001 chr2L_20790001 RAL-362_75b 122 chr2L 20957725 20957749 chr2L 20957828 20957853 4 103 0.0 0.5 0.2 3.3 128 chr2L 20957725 intergenic not near genes chr2L 20957789 intergenic not near genes chr2L 20957853 intergenic not near genes chr2L_4_20955001 chr2L_20955001 RAL-362_75b 123 chr2L 20976643 20976670 chr2L 20981457 20981485 X-element 5 4815 1.0 0.5 0.8 2.8 4842 chr2L 20976643 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981485 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-362_75b 124 chr2L 21246515 21246540 chr2L 21246607 21246635 6 94 0.5 2.0 1.2 2.7 120 chr2L 21246515 intron Hr39 + chr2L 21246575 intron Hr39 + chr2L 21246635 intron Hr39 + chr2L_6_21245001 chr2L_21245001 RAL-362_75b 125 chr2L 21355616 21355632 chr2L 21355761 21355774 4 144 1.0 0.5 0.8 2.2 158 chr2L 21355616 intron Tsp39D + chr2L 21355695 intron Tsp39D + chr2L 21355774 intron Tsp39D + chr2L_4_21355001 chr2L_21355001 RAL-362_75b 126 chr2L 21597028 21597052 chr2L 21604772 21604796 roo 4 7744 1.0 0.5 0.8 2.2 7768 chr2L 21597028 intergenic not near genes chr2L 21600912 intergenic not near genes chr2L 21604796 intergenic not near genes chr2L_4_21600001 chr2L_21600001 RAL-362_75b 127 chr2L 21819331 21819360 chr2L 21819419 21819448 4 87 1.5 1.0 1.2 1.8 117 chr2L 21819331 intergenic CR44786 + chr2L 21819390 intergenic CR44786 + chr2L 21819448 intergenic CR44786 + chr2L_4_21815001 chr2L_21815001 RAL-362_75b 128 chr2L 21981691 21981714 chr2L 21990855 21990879 roo 4 9165 1.0 1.0 1.0 2.0 9188 chr2L 21981691 exon CG2528 - chr2L 21986285 intron CG2528 - chr2L 21990879 exon CG2528 - chr2L_4_21985001 chr2L_21985001 RAL-362_75b 129 chr2L 22674067 22674078 chr2L 22674144 22674155 5 77 1.0 0.5 0.8 2.8 88 chr2L 22674067 intron CG40006 - chr2L 22674111 intron CG40006 - chr2L 22674155 intron CG40006 - chr2L_5_22670001 chr2L_22670001 RAL-362_75b 130 chr2L 22676132 22676150 chr2L 22676370 22676388 5 238 1.5 1.5 1.5 2.0 256 chr2L 22676132 intron CG40006 - chr2L 22676260 intron CG40006 - chr2L 22676388 intron CG40006 - chr2L_5_22675001 chr2L_22675001 RAL-362_75b 131 chr2L 22776436 22776451 chr2L 22778225 22778240 S-element 5 1789 0.5 1.0 0.8 2.8 1804 chr2L 22776436 intergenic not near genes chr2L 22777338 intergenic not near genes chr2L 22778240 intergenic not near genes chr2L_5_22775001 chr2L_22775001 RAL-362_75b 132 chr2R 529329 529351 chr2R 537954 537976 Max-element 4 8624 1.0 0.5 0.8 2.2 8647 chr2R 529329 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537976 intron CG40378 + chr2R_4_530001 chr2R_530001 RAL-362_75b 133 chr2R 4312955 4312985 chr2R 4313039 4313069 8 84 0.5 1.5 1.0 4.0 114 chr2R 4312955 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313069 intergenic not near genes chr2R_8_4310001 chr2R_4310001 RAL-362_75b 134 chr2R 4329558 4329577 chr2R 4329644 4329662 7 86 1.0 1.0 1.0 3.5 104 chr2R 4329558 intron Gprk1 - chr2R 4329610 intron Gprk1 - chr2R 4329662 intron Gprk1 - chr2R_7_4325001 chr2R_4325001 RAL-362_75b 135 chr2R 4933374 4933388 chr2R 4933937 4933951 6 563 0.5 1.5 1.0 3.0 577 chr2R 4933374 intron Ir41a + chr2R 4933662 intron Ir41a + chr2R 4933951 intron Ir41a + chr2R_6_4930001 chr2R_4930001 RAL-362_75b 136 chr2R 5417999 5418016 chr2R 5420631 5420648 Burdock 5 2632 1.5 0.5 1.0 2.5 2649 chr2R 5417999 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420648 intron laccase2 + chr2R_5_5415001 chr2R_5415001 RAL-362_75b 137 chr2R 5421531 5421562 chr2R 5421613 5421644 5 82 8.5 8.5 8.5 0.5 113 chr2R 5421531 intron laccase2 + chr2R 5421588 intron laccase2 + chr2R 5421644 intron laccase2 + chr2R_5_5420001 chr2R_5420001 RAL-362_75b 138 chr2R 5455785 5455801 chr2R 5455862 5455879 4 78 1.0 3.5 2.2 1.2 94 chr2R 5455785 3` UTR laccase2 + chr2R 5455832 3` UTR laccase2 + chr2R 5455879 3` UTR laccase2 + chr2R_4_5455001 chr2R_5455001 RAL-362_75b 139 chr2R 5869277 5869308 chr2R 5874353 5874384 flea 5 5075 0.0 2.0 1.0 2.5 5107 chr2R 5869277 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874384 intergenic not near genes chr2R_5_5870001 chr2R_5870001 RAL-362_75b 140 chr2R 5879363 5879374 chr2R 5879553 5879565 4 190 2.0 1.5 1.8 1.4 202 chr2R 5879363 3` UTR CG44438 - chr2R 5879464 3` UTR CG44438 - chr2R 5879565 exon CG44438 - chr2R_4_5875001 chr2R_5875001 RAL-362_75b 141 chr2R 6178690 6178709 chr2R 6178777 6178795 4 87 1.5 2.0 1.8 1.4 105 chr2R 6178690 intergenic not near genes chr2R 6178742 intergenic not near genes chr2R 6178795 intergenic not near genes chr2R_4_6175001 chr2R_6175001 RAL-362_75b 142 chr2R 6522272 6522293 chr2R 6522372 6522395 6 102 1.0 1.5 1.2 2.7 123 chr2R 6522272 intron jing + chr2R 6522334 intron jing + chr2R 6522395 intron jing + chr2R_6_6520001 chr2R_6520001 RAL-362_75b 143 chr2R 6857084 6857113 chr2R 6857201 6857233 5 119 1.0 2.5 1.8 1.8 149 chr2R 6857084 intergenic not near genes chr2R 6857158 intergenic not near genes chr2R 6857233 intergenic not near genes chr2R_5_6855001 chr2R_6855001 RAL-362_75b 144 chr2R 7196575 7196596 chr2R 7201350 7201371 F-element 6 4775 0.0 3.0 1.5 2.4 4796 chr2R 7196575 intron pk + chr2R 7198973 intron pk + chr2R 7201371 intron pk + chr2R_6_7195001 chr2R_7195001 RAL-362_75b 145 chr2R 7235816 7235849 chr2R 7240907 7240941 jockey 6 5091 1.0 1.5 1.2 2.7 5125 chr2R 7235816 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240941 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-362_75b 146 chr2R 7563098 7563112 chr2R 7563177 7563191 4 79 0.0 1.5 0.8 2.2 93 chr2R 7563098 3` UTR Corin + chr2R 7563144 3` UTR Corin + chr2R 7563191 3` UTR Corin + chr2R_4_7560001 chr2R_7560001 RAL-362_75b 147 chr2R 7642869 7642881 chr2R 7642949 7642961 4 80 0.0 1.0 0.5 2.7 92 chr2R 7642869 intron CG43340 + chr2R 7642915 intron CG43340 + chr2R 7642961 intron CG43340 + chr2R_4_7640001 chr2R_7640001 RAL-362_75b 148 chr2R 7694592 7694608 chr2R 7694676 7694692 5 84 1.0 1.0 1.0 2.5 100 chr2R 7694592 intron CG1399 - chr2R 7694642 intron CG1399 - chr2R 7694692 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RAL-362_75b 149 chr2R 7714087 7714108 chr2R 7714163 7714184 4 76 0.5 0.0 0.2 3.3 97 chr2R 7714087 exon CG1942 + chr2R 7714136 3` UTR CG1942 + chr2R 7714184 intergenic CG1942 + chr2R_4_7710001 chr2R_7710001 RAL-362_75b 150 chr2R 7869199 7869215 chr2R 7873985 7874001 Doc 4 4786 1.0 1.5 1.2 1.8 4802 chr2R 7869199 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874001 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-362_75b 151 chr2R 8330870 8330894 chr2R 8331355 8331380 roo 4 486 2.0 1.5 1.8 1.4 510 chr2R 8330870 intron pdm3 + chr2R 8331125 intron pdm3 + chr2R 8331380 intron pdm3 + chr2R_4_8330001 chr2R_8330001 RAL-362_75b 152 chr2R 8465453 8465478 chr2R 8465967 8465991 4 513 1.5 2.5 2.0 1.3 538 chr2R 8465453 exon Mal-A6 + chr2R 8465722 exon Mal-A6 + chr2R 8465991 exon Mal-A6 + chr2R_4_8465001 chr2R_8465001 RAL-362_75b 153 chr2R 8566029 8566066 chr2R 8566981 8567012 1360 6 951 0.5 0.0 0.2 5.0 983 chr2R 8566029 5` UTR Cyp6a14 - chr2R 8566520 5` UTR Cyp6a14 - chr2R 8567012 5` UTR Cyp6a14 - chr2R_6_8565001 chr2R_8565001 RAL-362_75b 154 chr2R 8593639 8593668 chr2R 8593734 8593763 5 95 0.5 1.5 1.0 2.5 124 chr2R 8593639 intergenic CG8736 - chr2R 8593701 intergenic CG8736 - chr2R 8593763 intergenic CG8736 - chr2R_5_8590001 chr2R_8590001 RAL-362_75b 155 chr2R 9669140 9669169 chr2R 9669241 9669269 8 100 3.5 1.5 2.5 2.3 129 chr2R 9669140 intron Mmp2 - chr2R 9669204 intron Mmp2 - chr2R 9669269 intron Mmp2 - chr2R_8_9665001 chr2R_9665001 RAL-362_75b 156 chr2R 9935031 9935050 chr2R 9935113 9935132 5 82 0.5 0.0 0.2 4.2 101 chr2R 9935031 intron Mef2 - chr2R 9935082 intron Mef2 - chr2R 9935132 intron Mef2 - chr2R_5_9935001 chr2R_9935001 RAL-362_75b 157 chr2R 10005853 10005863 chr2R 10007018 10007028 1360 4 1165 3.0 0.5 1.8 1.4 1175 chr2R 10005853 intron Pka-R2 - chr2R 10006440 intron Pka-R2 - chr2R 10007028 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-362_75b 158 chr2R 10167109 10167142 chr2R 10167185 10167217 4 76 1.0 0.5 0.8 2.2 108 chr2R 10167109 intron KCNQ - chr2R 10167163 intron KCNQ - chr2R 10167217 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-362_75b 159 chr2R 10171134 10171142 chr2R 10171218 10171226 4 84 1.0 2.5 1.8 1.4 92 chr2R 10171134 intron KCNQ - chr2R 10171180 intron KCNQ - chr2R 10171226 intron KCNQ - chr2R_4_10170001 chr2R_10170001 RAL-362_75b 160 chr2R 10313335 10313354 chr2R 10313423 10313441 5 87 0.5 2.0 1.2 2.3 106 chr2R 10313335 intergenic not near genes chr2R 10313388 intergenic not near genes chr2R 10313441 intergenic Ndg + chr2R_5_10310001 chr2R_10310001 RAL-362_75b 161 chr2R 10387989 10388001 chr2R 10388086 10388098 6 97 0.0 3.0 1.5 2.4 109 chr2R 10387989 intron CG42732 - chr2R 10388044 intron CG42732 - chr2R 10388098 intron CG42732 - chr2R_6_10385001 chr2R_10385001 RAL-362_75b 162 chr2R 10400399 10400426 chr2R 10400479 10400505 6 79 0.5 0.0 0.2 5.0 106 chr2R 10400399 intron CG42732 - chr2R 10400452 intron CG42732 - chr2R 10400505 intron CG42732 - chr2R_6_10400001 chr2R_10400001 RAL-362_75b 163 chr2R 10454106 10454130 chr2R 10454180 10454206 4 76 2.0 2.5 2.2 1.2 100 chr2R 10454106 intron,intron Galphao +,Cyp49a1 - chr2R 10454156 intron,intron Galphao +,Cyp49a1 - chr2R 10454206 intron,intron Galphao +,Cyp49a1 - chr2R_4_10450001 chr2R_10450001 RAL-362_75b 164 chr2R 10790149 10790172 chr2R 10790237 10790260 7 88 1.5 2.0 1.8 2.5 111 chr2R 10790149 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790260 intron CG33144 - chr2R_7_10790001 chr2R_10790001 RAL-362_75b 165 chr2R 10948040 10948061 chr2R 10955591 10955612 17.6 6 7550 0.0 1.5 0.8 3.3 7572 chr2R 10948040 intergenic not near genes chr2R 10951826 intergenic not near genes chr2R 10955612 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-362_75b 166 chr2R 11415518 11415545 chr2R 11418667 11418694 opus 5 3149 1.5 0.5 1.0 2.5 3176 chr2R 11415518 intron Drip - chr2R 11417106 intron Drip - chr2R 11418694 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-362_75b 167 chr2R 11472648 11472677 chr2R 11473845 11473873 pogo 6 1196 3.0 1.0 2.0 2.0 1225 chr2R 11472648 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473873 intergenic not near genes chr2R_6_11470001 chr2R_11470001 RAL-362_75b 168 chr2R 11607910 11607935 chr2R 11607992 11608017 5 81 0.0 0.5 0.2 4.2 107 chr2R 11607910 intron tou - chr2R 11607964 intron tou - chr2R 11608017 intron tou - chr2R_5_11605001 chr2R_11605001 RAL-362_75b 169 chr2R 12186001 12186032 chr2R 12186096 12186125 7 95 0.5 1.0 0.8 3.9 124 chr2R 12186001 intron Cyp6g1 + chr2R 12186063 intron Cyp6g1 + chr2R 12186125 intron Cyp6g1 + chr2R_7_12185001 chr2R_12185001 RAL-362_75b 170 chr2R 12187478 12187508 chr2R 12190094 12190124 22 2617 33.5 23.5 28.5 0.7 2646 chr2R 12187478 exon Cyp6g1 + chr2R 12188801 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_22_12185001 chr2R_12185001 RAL-362_75b 171 chr2R 12481153 12481165 chr2R 12482956 12482968 roo 4 1803 0.0 2.5 1.2 1.8 1815 chr2R 12481153 exon Dh44-R2 + chr2R 12482060 intron Dh44-R2 + chr2R 12482968 intron Dh44-R2 + chr2R_4_12480001 chr2R_12480001 RAL-362_75b 172 chr2R 12501701 12501723 chr2R 12503863 12503885 Rt1c 5 2162 0.5 0.5 0.5 3.3 2184 chr2R 12501701 intron fdl - chr2R 12502793 intron fdl - chr2R 12503885 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-362_75b 173 chr2R 12707523 12707541 chr2R 12715889 12715907 roo 5 8366 0.0 1.0 0.5 3.3 8384 chr2R 12707523 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715907 intron CG42663 + chr2R_5_12710001 chr2R_12710001 RAL-362_75b 174 chr2R 13078759 13078784 chr2R 13078856 13078881 7 96 1.0 1.0 1.0 3.5 122 chr2R 13078759 intron Drl-2 - chr2R 13078820 intron Drl-2 - chr2R 13078881 intron Drl-2 - chr2R_7_13075001 chr2R_13075001 RAL-362_75b 175 chr2R 13331608 13331637 chr2R 13331927 13331956 5 319 1.5 0.5 1.0 2.5 348 chr2R 13331608 intron CR44206 - chr2R 13331782 intron CR44206 - chr2R 13331956 intron CR44206 - chr2R_5_13330001 chr2R_13330001 RAL-362_75b 176 chr2R 13356503 13356536 chr2R 13356588 13356621 9 85 0.5 0.5 0.5 6.0 118 chr2R 13356503 intergenic not near genes chr2R 13356562 intergenic not near genes chr2R 13356621 intergenic not near genes chr2R_9_13355001 chr2R_13355001 RAL-362_75b 177 chr2R 13566265 13566286 chr2R 13566345 13566366 7 80 1.5 1.0 1.2 3.2 101 chr2R 13566265 intergenic not near genes chr2R 13566316 intergenic not near genes chr2R 13566366 intergenic not near genes chr2R_7_13565001 chr2R_13565001 RAL-362_75b 178 chr2R 13580495 13580517 chr2R 13580845 13580867 jockey 4 350 0.0 1.0 0.5 2.7 372 chr2R 13580495 3` UTR CG6191 - chr2R 13580681 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580867 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-362_75b 179 chr2R 13721206 13721229 chr2R 13721289 13721312 4 83 0.0 1.0 0.5 2.7 106 chr2R 13721206 intron fas + chr2R 13721259 intron fas + chr2R 13721312 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-362_75b 180 chr2R 13790330 13790343 chr2R 13790406 13790418 5 76 1.0 0.0 0.5 3.3 88 chr2R 13790330 intergenic not near genes chr2R 13790374 intergenic not near genes chr2R 13790418 intergenic not near genes chr2R_5_13790001 chr2R_13790001 RAL-362_75b 181 chr2R 14393865 14393889 chr2R 14393949 14393974 4 85 1.5 0.5 1.0 2.0 109 chr2R 14393865 intergenic not near genes chr2R 14393920 intergenic not near genes chr2R 14393974 intergenic not near genes chr2R_4_14390001 chr2R_14390001 RAL-362_75b 182 chr2R 14606552 14606573 chr2R 14606650 14606671 4 98 0.5 3.0 1.8 1.4 119 chr2R 14606552 exon CG33468 - chr2R 14606612 exon CG33468 - chr2R 14606671 exon CG33468 - chr2R_4_14605001 chr2R_14605001 RAL-362_75b 183 chr2R 14799868 14799894 chr2R 14799944 14799970 8 76 0.5 0.5 0.5 5.3 102 chr2R 14799868 intron kn - chr2R 14799919 intron kn - chr2R 14799970 intron kn - chr2R_8_14795001 chr2R_14795001 RAL-362_75b 184 chr2R 14855029 14855063 chr2R 14855121 14855155 4 92 0.0 0.0 0.0 4.0 126 chr2R 14855029 5` UTR Ciao1 - chr2R 14855092 intergenic Ciao1 -,HPS1 + chr2R 14855155 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-362_75b 185 chr2R 14922155 14922165 chr2R 14922230 14922241 5 76 3.0 1.5 2.2 1.6 86 chr2R 14922155 intron CG10249 - chr2R 14922198 intron CG10249 - chr2R 14922241 intron CG10249 - chr2R_5_14920001 chr2R_14920001 RAL-362_75b 186 chr2R 15296162 15296172 chr2R 15296245 15296255 4 82 1.5 1.5 1.5 1.6 93 chr2R 15296162 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296255 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-362_75b 187 chr2R 15833532 15833558 chr2R 15833619 15833645 4 87 0.5 2.5 1.5 1.6 113 chr2R 15833532 intron,intron tun +,Poxn - chr2R 15833588 intron,intron tun +,Poxn - chr2R 15833645 intron,intron tun +,Poxn - chr2R_4_15830001 chr2R_15830001 RAL-362_75b 188 chr2R 16225204 16225216 chr2R 16225312 16225324 5 108 2.0 1.5 1.8 1.8 120 chr2R 16225204 5` UTR CG15706 - chr2R 16225264 5` UTR CG15706 - chr2R 16225324 5` UTR CG15706 - chr2R_5_16225001 chr2R_16225001 RAL-362_75b 189 chr2R 17208869 17208897 chr2R 17208946 17208974 4 76 1.0 0.5 0.8 2.2 105 chr2R 17208869 intergenic not near genes chr2R 17208922 intergenic not near genes chr2R 17208974 intergenic not near genes chr2R_4_17205001 chr2R_17205001 RAL-362_75b 190 chr2R 17852936 17852959 chr2R 17853027 17853050 4 91 0.5 0.5 0.5 2.7 114 chr2R 17852936 intron olf186-F + chr2R 17852993 intron olf186-F + chr2R 17853050 intron olf186-F + chr2R_4_17850001 chr2R_17850001 RAL-362_75b 191 chr2R 18308284 18308319 chr2R 18308390 18308425 4 106 0.5 1.0 0.8 2.2 141 chr2R 18308284 intron sbb - chr2R 18308354 intron sbb - chr2R 18308425 intron sbb - chr2R_4_18305001 chr2R_18305001 RAL-362_75b 192 chr2R 18358390 18358414 chr2R 18372601 18372626 roo 6 14212 0.0 1.0 0.5 4.0 14236 chr2R 18358390 intergenic not near genes chr2R 18365508 intergenic not near genes chr2R 18372626 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-362_75b 193 chr2R 18376728 18376759 chr2R 18376818 18376849 5 90 0.5 1.5 1.0 2.5 121 chr2R 18376728 intergenic not near genes chr2R 18376788 intergenic not near genes chr2R 18376849 intergenic not near genes chr2R_5_18375001 chr2R_18375001 RAL-362_75b 194 chr2R 18557386 18557415 chr2R 18557497 18557525 4 111 3.5 2.5 3.0 1.0 139 chr2R 18557386 intron GEFmeso - chr2R 18557456 intron GEFmeso - chr2R 18557525 intron GEFmeso - chr2R_4_18555001 chr2R_18555001 RAL-362_75b 195 chr2R 18605142 18605163 chr2R 18605234 18605255 4 92 1.0 1.0 1.0 2.0 113 chr2R 18605142 intron GEFmeso - chr2R 18605198 intron GEFmeso - chr2R 18605255 intron GEFmeso - chr2R_4_18605001 chr2R_18605001 RAL-362_75b 196 chr2R 18692901 18692920 chr2R 18692988 18693007 5 86 0.0 1.0 0.5 3.3 106 chr2R 18692901 intron Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693007 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-362_75b 197 chr2R 18984471 18984486 chr2R 18984730 18984745 4 259 1.5 0.5 1.0 2.0 274 chr2R 18984471 intergenic not near genes chr2R 18984608 intergenic not near genes chr2R 18984745 intergenic not near genes chr2R_4_18980001 chr2R_18980001 RAL-362_75b 198 chr2R 18992024 18992030 chr2R 18992164 18992171 4 141 2.0 2.0 2.0 1.3 147 chr2R 18992024 intron tn + chr2R 18992098 intron tn + chr2R 18992171 intron tn + chr2R_4_18990001 chr2R_18990001 RAL-362_75b 199 chr2R 19010748 19010763 chr2R 19010865 19010877 4 116 1.0 1.5 1.2 1.8 129 chr2R 19010748 intergenic not near genes chr2R 19010812 intergenic not near genes chr2R 19010877 intergenic not near genes chr2R_4_19010001 chr2R_19010001 RAL-362_75b 200 chr2R 19350633 19350661 chr2R 19350721 19350749 7 88 1.5 1.5 1.5 2.8 116 chr2R 19350633 intron Rgk1 - chr2R 19350691 intron Rgk1 - chr2R 19350749 intron Rgk1 - chr2R_7_19350001 chr2R_19350001 RAL-362_75b 201 chr2R 19555586 19555605 chr2R 19555670 19555689 4 84 1.0 1.5 1.2 1.8 103 chr2R 19555586 intron sm - chr2R 19555638 intron sm - chr2R 19555689 intron sm - chr2R_4_19555001 chr2R_19555001 RAL-362_75b 202 chr2R 19776597 19776611 chr2R 19779917 19779934 jockey 4 3322 3.0 1.5 2.2 1.2 3337 chr2R 19776597 intergenic not near genes chr2R 19778266 intergenic not near genes chr2R 19779934 intergenic not near genes chr2R_4_19775001 chr2R_19775001 RAL-362_75b 203 chr2R 20009504 20009529 chr2R 20009583 20009607 4 78 0.0 3.0 1.5 1.6 103 chr2R 20009504 intergenic not near genes chr2R 20009556 intergenic not near genes chr2R 20009607 intergenic not near genes chr2R_4_20005001 chr2R_20005001 RAL-362_75b 204 chr2R 20442943 20442948 chr2R 20443090 20443095 4 147 5.5 6.0 5.8 0.6 152 chr2R 20442943 intron CG12484 + chr2R 20443019 intron CG12484 + chr2R 20443095 intron CG12484 + chr2R_4_20440001 chr2R_20440001 RAL-362_75b 205 chr2R 20601722 20601748 chr2R 20601805 20601833 6 85 0.0 1.0 0.5 4.0 111 chr2R 20601722 intron bl + chr2R 20601778 intron bl + chr2R 20601833 intron bl + chr2R_6_20600001 chr2R_20600001 RAL-362_75b 206 chr2R 21060639 21060651 chr2R 21060721 21060733 4 82 1.5 0.5 1.0 2.0 94 chr2R 21060639 intergenic CG15653 -,mRpL54 + chr2R 21060686 intergenic mRpL54 +,CG15653 - chr2R 21060733 intergenic mRpL54 +,CG15653 - chr2R_4_21060001 chr2R_21060001 RAL-362_75b 207 chr2R 21432258 21432279 chr2R 21432362 21432383 7 104 1.5 0.5 1.0 3.5 125 chr2R 21432258 intron Sdc - chr2R 21432320 intron Sdc - chr2R 21432383 intron Sdc - chr2R_7_21430001 chr2R_21430001 RAL-362_75b 208 chr2R 21946781 21946786 chr2R 21946875 21946882 4 95 1.0 2.5 1.8 1.4 101 chr2R 21946781 intergenic not near genes chr2R 21946832 intergenic not near genes chr2R 21946882 intergenic not near genes chr2R_4_21945001 chr2R_21945001 RAL-362_75b 209 chr2R 22178766 22178777 chr2R 22178852 22178863 4 86 0.0 3.5 1.8 1.4 97 chr2R 22178766 intron CG11170 - chr2R 22178814 intron CG11170 - chr2R 22178863 intron CG11170 - chr2R_4_22175001 chr2R_22175001 RAL-362_75b 210 chr2R 22185673 22185703 chr2R 22185772 22185802 4 99 0.5 0.0 0.2 3.3 129 chr2R 22185673 3` UTR MED16 + chr2R 22185738 3` UTR MED16 + chr2R 22185802 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-362_75b 211 chr2R 22349692 22349704 chr2R 22351476 22351488 jockey 4 1784 1.0 1.0 1.0 2.0 1796 chr2R 22349692 intron Liprin-gamma - chr2R 22350590 intron Liprin-gamma - chr2R 22351488 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-362_75b 212 chr2R 22360380 22360395 chr2R 22360813 22360828 jockey 4 433 2.5 0.0 1.2 1.8 448 chr2R 22360380 intron Liprin-gamma - chr2R 22360604 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-362_75b 213 chr2R 22460381 22460405 chr2R 22460460 22460483 4 79 1.5 1.0 1.2 1.8 102 chr2R 22460381 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460483 intron CG10384 + chr2R_4_22460001 chr2R_22460001 RAL-362_75b 214 chr2R 22541867 22541888 chr2R 22541967 22541988 5 100 1.0 1.0 1.0 2.5 121 chr2R 22541867 intron px - chr2R 22541928 intron px - chr2R 22541988 intron px - chr2R_5_22540001 chr2R_22540001 RAL-362_75b 215 chr2R 22580438 22580445 chr2R 22586582 22586589 diver 4 6144 2.0 0.5 1.2 1.8 6151 chr2R 22580438 intron dnr1 - chr2R 22583514 intron dnr1 - chr2R 22586589 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-362_75b 216 chr2R 22776621 22776648 chr2R 22776701 22776729 7 81 0.0 0.5 0.2 5.8 108 chr2R 22776621 intron CG42260 - chr2R 22776675 intron CG42260 - chr2R 22776729 intron CG42260 - chr2R_7_22775001 chr2R_22775001 RAL-362_75b 217 chr2R 22970478 22970511 chr2R 22972705 22972738 4 2227 6.0 7.5 6.8 0.5 2260 chr2R 22970478 intergenic not near genes chr2R 22971608 intergenic not near genes chr2R 22972738 intergenic not near genes chr2R_4_22970001 chr2R_22970001 RAL-362_75b 218 chr2R 22991630 22991653 chr2R 22991722 22991745 7 92 0.5 0.5 0.5 4.7 115 chr2R 22991630 intron twi + chr2R 22991688 intron twi + chr2R 22991745 intron twi + chr2R_7_22990001 chr2R_22990001 RAL-362_75b 219 chr2R 23052652 23052677 chr2R 23052728 23052753 5 75 1.5 0.0 0.8 2.8 101 chr2R 23052652 intergenic not near genes chr2R 23052702 intergenic not near genes chr2R 23052753 intergenic not near genes chr2R_5_23050001 chr2R_23050001 RAL-362_75b 220 chr2R 23188554 23188590 chr2R 23188632 23188668 5 77 2.0 0.5 1.2 2.3 114 chr2R 23188554 intron CG34371 - chr2R 23188611 intron CG34371 - chr2R 23188668 intron CG34371 - chr2R_5_23185001 chr2R_23185001 RAL-362_75b 221 chr2R 23402607 23402629 chr2R 23407683 23407705 flea 7 5076 0.0 2.5 1.2 3.2 5098 chr2R 23402607 intergenic CG3520 - chr2R 23405156 intergenic not near genes chr2R 23407705 intergenic not near genes chr2R_7_23405001 chr2R_23405001 RAL-362_75b 222 chr2R 23437232 23437243 chr2R 23437309 23437319 4 76 1.5 3.0 2.2 1.2 87 chr2R 23437232 intergenic not near genes chr2R 23437276 intergenic not near genes chr2R 23437319 intergenic not near genes chr2R_4_23435001 chr2R_23435001 RAL-362_75b 223 chr2R 23570415 23570430 chr2R 23570492 23570507 4 77 0.5 3.5 2.0 1.3 92 chr2R 23570415 intron apt + chr2R 23570461 intron apt + chr2R 23570507 intron apt + chr2R_4_23570001 chr2R_23570001 RAL-362_75b 224 chr2R 23986520 23986524 chr2R 23986600 23986604 4 80 0.0 2.0 1.0 2.0 84 chr2R 23986520 intron Phm - chr2R 23986562 intron Phm - chr2R 23986604 intron Phm - chr2R_4_23985001 chr2R_23985001 RAL-362_75b 225 chr2R 24290559 24290588 chr2R 24290642 24290671 4 83 0.5 0.5 0.5 2.7 112 chr2R 24290559 3` UTR nvy + chr2R 24290615 3` UTR nvy + chr2R 24290671 3` UTR nvy + chr2R_4_24290001 chr2R_24290001 RAL-362_75b 226 chr2R 24303896 24303912 chr2R 24303980 24303996 6 84 1.5 0.0 0.8 3.3 100 chr2R 24303896 intergenic not near genes chr2R 24303946 intergenic not near genes chr2R 24303996 intergenic not near genes chr2R_6_24300001 chr2R_24300001 RAL-362_75b 227 chr2R 24353428 24353460 chr2R 24361788 24361822 roo 6 8362 1.5 1.5 1.5 2.4 8394 chr2R 24353428 intron,intron bs +,CR44811 - chr2R 24357625 intron,intron bs +,CR44811 - chr2R 24361822 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-362_75b 228 chr2R 24415315 24415330 chr2R 24415400 24415415 4 85 1.5 1.5 1.5 1.6 100 chr2R 24415315 intergenic CG45068 +,CG45069 +,prom - chr2R 24415365 intergenic prom -,CG45068 +,CG45069 + chr2R 24415415 3` UTR prom - chr2R_4_24415001 chr2R_24415001 RAL-362_75b 229 chr2R 24513815 24513833 chr2R 24513894 24513912 4 79 1.5 2.0 1.8 1.4 97 chr2R 24513815 intron Letm1 - chr2R 24513864 intron Letm1 - chr2R 24513912 intron Letm1 - chr2R_4_24510001 chr2R_24510001 RAL-362_75b 230 chr2R 24584343 24584372 chr2R 24584425 24584454 6 82 0.5 0.0 0.2 5.0 111 chr2R 24584343 intron pio + chr2R 24584398 intron pio + chr2R 24584454 intron pio + chr2R_6_24580001 chr2R_24580001 RAL-362_75b 231 chr2R 24763616 24763625 chr2R 24765592 24765601 G2 4 1976 3.0 3.5 3.2 1.0 1985 chr2R 24763616 exon CG3894 + chr2R 24764608 intron CG3894 + chr2R 24765601 exon CG3894 + chr2R_4_24760001 chr2R_24760001 RAL-362_75b 232 chr2R 24953277 24953309 chr2R 24953360 24953392 4 83 0.5 1.0 0.8 2.2 115 chr2R 24953277 3` UTR CG12851 + chr2R 24953334 3` UTR CG12851 + chr2R 24953392 3` UTR CG12851 + chr2R_4_24950001 chr2R_24950001 RAL-362_75b 233 chr2R 25014544 25014574 chr2R 25014620 25014649 5 76 0.5 1.5 1.0 2.5 105 chr2R 25014544 intron uzip + chr2R 25014596 intron uzip + chr2R 25014649 intron uzip + chr2R_5_25010001 chr2R_25010001 RAL-362_75b 234 chr2R 25022639 25022670 chr2R 25022723 25022754 4 84 2.5 3.0 2.8 1.1 115 chr2R 25022639 intron uzip + chr2R 25022696 intron uzip + chr2R 25022754 intron uzip + chr2R_4_25020001 chr2R_25020001 RAL-362_75b 235 chr2R 25081605 25081636 chr2R 25082701 25082729 6 1095 0.5 0.0 0.2 5.0 1124 chr2R 25081605 intron gol - chr2R 25082167 intron gol - chr2R 25082729 intron gol - chr2R_6_25080001 chr2R_25080001 RAL-362_75b 236 chr2R 25101298 25101308 chr2R 25101400 25101410 4 101 1.0 2.0 1.5 1.6 112 chr2R 25101298 intron lov - chr2R 25101354 intron lov - chr2R 25101410 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-362_75b 237 chr2R 25104781 25104801 chr2R 25104906 25104926 4 125 0.0 1.0 0.5 2.7 145 chr2R 25104781 intron lov - chr2R 25104854 intron lov - chr2R 25104926 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-362_75b 238 chr3L 110213 110242 chr3L 119380 119409 roo 5 9167 1.0 1.0 1.0 2.5 9196 chr3L 110213 intergenic not near genes chr3L 114811 intergenic not near genes chr3L 119409 intergenic not near genes chr3L_5_110001 chr3L_110001 RAL-362_75b 239 chr3L 159303 159341 chr3L 159398 159436 6 95 2.0 1.0 1.5 2.4 133 chr3L 159303 intron p130CAS + chr3L 159370 intron p130CAS + chr3L 159436 intron p130CAS + chr3L_6_155001 chr3L_155001 RAL-362_75b 240 chr3L 428191 428203 chr3L 428311 428324 4 121 0.5 0.0 0.2 3.3 133 chr3L 428191 intergenic not near genes chr3L 428258 intergenic not near genes chr3L 428324 intergenic not near genes chr3L_4_425001 chr3L_425001 RAL-362_75b 241 chr3L 638032 638049 chr3L 638321 638337 4 289 2.0 1.0 1.5 1.6 305 chr3L 638032 5` UTR,intron CR43334 +,CR43423 - chr3L 638184 5` UTR,3` UTR CR43334 +,CR43423 - chr3L 638337 5` UTR,3` UTR CR43334 +,CR43423 - chr3L_4_635001 chr3L_635001 RAL-362_75b 242 chr3L 705904 705930 chr3L 706000 706024 4 96 2.5 0.0 1.2 1.8 120 chr3L 705904 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706024 3` UTR CG13895 - chr3L_4_705001 chr3L_705001 RAL-362_75b 243 chr3L 925177 925202 chr3L 932603 932627 mdg1 4 7426 1.5 2.0 1.8 1.4 7450 chr3L 925177 intron Glut1 + chr3L 928902 intron Glut1 + chr3L 932627 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-362_75b 244 chr3L 1003053 1003079 chr3L 1003130 1003156 8 77 1.0 2.0 1.5 3.2 103 chr3L 1003053 intron trio - chr3L 1003104 intron trio - chr3L 1003156 intron trio - chr3L_8_1000001 chr3L_1000001 RAL-362_75b 245 chr3L 1008388 1008415 chr3L 1008489 1008516 4 101 5.5 7.0 6.2 0.6 128 chr3L 1008388 intron trio - chr3L 1008452 intron trio - chr3L 1008516 intron trio - chr3L_4_1005001 chr3L_1005001 RAL-362_75b 246 chr3L 1219598 1219620 chr3L 1227331 1227349 412 5 7732 0.5 0.5 0.5 3.3 7751 chr3L 1219598 intron mwh + chr3L 1223474 intron mwh + chr3L 1227349 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-362_75b 247 chr3L 1310981 1311012 chr3L 1315842 1315872 5 4861 6.5 12.5 9.5 0.5 4891 chr3L 1310981 exon CG2469 + chr3L 1313426 intergenic CG9186 -,CG9153 + chr3L 1315872 exon CG9153 + chr3L_5_1310001 chr3L_1310001 RAL-362_75b 248 chr3L 1581159 1581177 chr3L 1581493 1581511 5 334 0.0 1.0 0.5 3.3 352 chr3L 1581159 intron CG13917 + chr3L 1581335 intron CG13917 + chr3L 1581511 intron CG13917 + chr3L_5_1580001 chr3L_1580001 RAL-362_75b 249 chr3L 1823403 1823419 chr3L 1823503 1823519 4 100 1.5 0.5 1.0 2.0 116 chr3L 1823403 intergenic GV1 + chr3L 1823461 intergenic not near genes chr3L 1823519 intergenic not near genes chr3L_4_1820001 chr3L_1820001 RAL-362_75b 250 chr3L 2006474 2006490 chr3L 2006554 2006570 4 80 2.0 2.0 2.0 1.3 96 chr3L 2006474 intergenic not near genes chr3L 2006522 intergenic not near genes chr3L 2006570 intergenic not near genes chr3L_4_2005001 chr3L_2005001 RAL-362_75b 251 chr3L 2168779 2168796 chr3L 2168868 2168887 4 90 1.0 1.5 1.2 1.8 108 chr3L 2168779 exon CG15879 - chr3L 2168833 intron CG15879 - chr3L 2168887 intron CG15879 - chr3L_4_2165001 chr3L_2165001 RAL-362_75b 252 chr3L 2308007 2308032 chr3L 2308113 2308136 7 106 1.0 0.5 0.8 3.9 129 chr3L 2308007 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308136 intergenic not near genes chr3L_7_2305001 chr3L_2305001 RAL-362_75b 253 chr3L 2525335 2525353 chr3L 2525412 2525430 4 77 2.0 1.5 1.8 1.4 95 chr3L 2525335 exon Spn - chr3L 2525382 exon Spn - chr3L 2525430 exon Spn - chr3L_4_2525001 chr3L_2525001 RAL-362_75b 254 chr3L 2548271 2548286 chr3L 2548360 2548375 6 89 1.0 1.0 1.0 3.0 104 chr3L 2548271 intron Spn - chr3L 2548323 intron Spn - chr3L 2548375 intron Spn - chr3L_6_2545001 chr3L_2545001 RAL-362_75b 255 chr3L 2590883 2590907 chr3L 2590979 2591001 5 96 0.5 1.0 0.8 2.8 118 chr3L 2590883 intron dos + chr3L 2590942 intron dos + chr3L 2591001 intron dos + chr3L_5_2590001 chr3L_2590001 RAL-362_75b 256 chr3L 2897032 2897063 chr3L 2897205 2897236 4 173 2.0 1.0 1.5 1.6 204 chr3L 2897032 intron Shab + chr3L 2897134 intron Shab + chr3L 2897236 intron Shab + chr3L_4_2895001 chr3L_2895001 RAL-362_75b 257 chr3L 3061292 3061303 chr3L 3069875 3069885 Tirant 4 8582 2.0 2.5 2.2 1.2 8593 chr3L 3061292 intron CG32486 - chr3L 3065588 intron CG32486 - chr3L 3069885 intron CG32486 - chr3L_4_3065001 chr3L_3065001 RAL-362_75b 258 chr3L 3100644 3100655 chr3L 3100904 3100914 4 260 0.5 1.0 0.8 2.2 270 chr3L 3100644 intron Cht7 - chr3L 3100779 intron Cht7 - chr3L 3100914 intron Cht7 - chr3L_4_3100001 chr3L_3100001 RAL-362_75b 259 chr3L 3317542 3317558 chr3L 3317621 3317637 4 79 0.0 1.0 0.5 2.7 95 chr3L 3317542 intergenic Drsl5 +,PIG-C - chr3L 3317590 intergenic PIG-C -,Drsl5 + chr3L 3317637 intergenic PIG-C -,Drsl5 + chr3L_4_3315001 chr3L_3315001 RAL-362_75b 260 chr3L 3475078 3475109 chr3L 3475522 3475553 jockey 5 444 0.0 0.5 0.2 4.2 475 chr3L 3475078 intron CG42324 + chr3L 3475316 intron CG42324 + chr3L 3475553 intron CG42324 + chr3L_5_3475001 chr3L_3475001 RAL-362_75b 261 chr3L 3544398 3544410 chr3L 3544508 3544520 5 110 0.0 0.5 0.2 4.2 122 chr3L 3544398 intron Eip63E + chr3L 3544459 intron Eip63E + chr3L 3544520 intron Eip63E + chr3L_5_3540001 chr3L_3540001 RAL-362_75b 262 chr3L 3601304 3601324 chr3L 3606615 3606635 copia 5 5310 3.5 0.0 1.8 1.8 5331 chr3L 3601304 intron Eip63E + chr3L 3603970 intron Eip63E + chr3L 3606635 intron Eip63E + chr3L_5_3600001 chr3L_3600001 RAL-362_75b 263 chr3L 3797242 3797265 chr3L 3797325 3797348 4 83 0.5 0.0 0.2 3.3 106 chr3L 3797242 intron CG32264 - chr3L 3797295 intron CG32264 - chr3L 3797348 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-362_75b 264 chr3L 3815055 3815078 chr3L 3815136 3815159 7 81 1.0 0.5 0.8 3.9 104 chr3L 3815055 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815107 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815159 intron,intron Scsalpha +,CR43932 - chr3L_7_3815001 chr3L_3815001 RAL-362_75b 265 chr3L 4342432 4342438 chr3L 4342511 4342517 4 79 1.0 1.0 1.0 2.0 85 chr3L 4342432 intron Cip4 - chr3L 4342474 intron Cip4 - chr3L 4342517 intron Cip4 - chr3L_4_4340001 chr3L_4340001 RAL-362_75b 266 chr3L 4478158 4478168 chr3L 4478235 4478245 5 77 1.5 1.5 1.5 2.0 87 chr3L 4478158 intergenic not near genes chr3L 4478202 intergenic not near genes chr3L 4478245 intergenic not near genes chr3L_5_4475001 chr3L_4475001 RAL-362_75b 267 chr3L 4580314 4580333 chr3L 4580400 4580419 4 86 0.0 2.5 1.2 1.8 105 chr3L 4580314 intron CG42540 + chr3L 4580366 intron CG42540 + chr3L 4580419 intron CG42540 + chr3L_4_4580001 chr3L_4580001 RAL-362_75b 268 chr3L 4901130 4901151 chr3L 4907320 4907340 diver 7 6190 0.5 0.5 0.5 4.7 6210 chr3L 4901130 intergenic CG13704 + chr3L 4904235 intergenic not near genes chr3L 4907340 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-362_75b 269 chr3L 5088526 5088547 chr3L 5088619 5088640 4 93 0.0 0.5 0.2 3.3 114 chr3L 5088526 intergenic not near genes chr3L 5088583 intergenic not near genes chr3L 5088640 intergenic not near genes chr3L_4_5085001 chr3L_5085001 RAL-362_75b 270 chr3L 5384324 5384339 chr3L 5384404 5384417 5 80 0.0 1.5 0.8 2.8 93 chr3L 5384324 intergenic not near genes chr3L 5384370 intergenic not near genes chr3L 5384417 intergenic not near genes chr3L_5_5380001 chr3L_5380001 RAL-362_75b 271 chr3L 5926317 5926351 chr3L 5926507 5926539 BS 4 190 0.5 1.5 1.0 2.0 222 chr3L 5926317 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926539 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-362_75b 272 chr3L 5988951 5988980 chr3L 5989040 5989069 6 88 0.5 1.0 0.8 3.3 118 chr3L 5988951 intergenic not near genes chr3L 5989010 intergenic not near genes chr3L 5989069 intergenic not near genes chr3L_6_5985001 chr3L_5985001 RAL-362_75b 273 chr3L 6990727 6990752 chr3L 6990806 6990832 4 80 0.5 2.0 1.2 1.8 105 chr3L 6990727 5` UTR bin + chr3L 6990780 5` UTR bin + chr3L 6990832 exon bin + chr3L_4_6990001 chr3L_6990001 RAL-362_75b 274 chr3L 7085046 7085063 chr3L 7085190 7085207 5 144 1.5 0.5 1.0 2.5 161 chr3L 7085046 intergenic not near genes chr3L 7085126 intergenic not near genes chr3L 7085207 intergenic not near genes chr3L_5_7085001 chr3L_7085001 RAL-362_75b 275 chr3L 7244941 7244962 chr3L 7245032 7245054 5 91 0.5 3.5 2.0 1.7 113 chr3L 7244941 exon mei-P22 + chr3L 7244998 exon mei-P22 + chr3L 7245054 exon mei-P22 + chr3L_5_7240001 chr3L_7240001 RAL-362_75b 276 chr3L 7581628 7581654 chr3L 7581712 7581735 5 83 1.0 0.0 0.5 3.3 107 chr3L 7581628 intergenic not near genes chr3L 7581682 intergenic not near genes chr3L 7581735 intergenic not near genes chr3L_5_7580001 chr3L_7580001 RAL-362_75b 277 chr3L 7591155 7591180 chr3L 7591245 7591270 5 90 0.5 0.5 0.5 3.3 115 chr3L 7591155 intergenic CG7716 - chr3L 7591212 intergenic CG7716 - chr3L 7591270 intergenic CG7716 - chr3L_5_7590001 chr3L_7590001 RAL-362_75b 278 chr3L 7622955 7622973 chr3L 7623388 7623406 5 433 1.0 3.0 2.0 1.7 451 chr3L 7622955 intron CG33275 + chr3L 7623180 intron CG33275 + chr3L 7623406 intron CG33275 + chr3L_5_7620001 chr3L_7620001 RAL-362_75b 279 chr3L 7793713 7793744 chr3L 7800765 7800796 297 4 7052 1.5 1.5 1.5 1.6 7083 chr3L 7793713 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800796 intron CG32369 - chr3L_4_7795001 chr3L_7795001 RAL-362_75b 280 chr3L 7886515 7886528 chr3L 7889032 7889046 Stalker4 4 2518 0.5 1.0 0.8 2.2 2531 chr3L 7886515 intron CG32365 + chr3L 7887780 intron CG32365 + chr3L 7889046 intron CG32365 + chr3L_4_7885001 chr3L_7885001 RAL-362_75b 281 chr3L 7916840 7916860 chr3L 7926011 7926031 roo 4 9171 1.5 0.5 1.0 2.0 9191 chr3L 7916840 3` UTR syd - chr3L 7921436 intron syd - chr3L 7926031 3` UTR syd - chr3L_4_7920001 chr3L_7920001 RAL-362_75b 282 chr3L 7983380 7983400 chr3L 7983458 7983478 4 78 0.0 1.0 0.5 2.7 98 chr3L 7983380 intron nmo + chr3L 7983429 intron nmo + chr3L 7983478 intron nmo + chr3L_4_7980001 chr3L_7980001 RAL-362_75b 283 chr3L 8243829 8243848 chr3L 8243912 8243931 5 83 0.0 2.0 1.0 2.5 102 chr3L 8243829 intron Dscam4 + chr3L 8243880 intron Dscam4 + chr3L 8243931 intron Dscam4 + chr3L_5_8240001 chr3L_8240001 RAL-362_75b 284 chr3L 8551743 8551765 chr3L 8551826 8551848 4 83 1.5 0.0 0.8 2.2 105 chr3L 8551743 intron rhea + chr3L 8551796 intron rhea + chr3L 8551848 intron rhea + chr3L_4_8550001 chr3L_8550001 RAL-362_75b 285 chr3L 8765613 8765639 chr3L 8765712 8765736 4 98 2.0 1.0 1.5 1.6 123 chr3L 8765613 intron Fhos + chr3L 8765674 intron Fhos + chr3L 8765736 intron Fhos + chr3L_4_8765001 chr3L_8765001 RAL-362_75b 286 chr3L 9130560 9130580 chr3L 9134321 9134341 412 4 3761 1.0 1.0 1.0 2.0 3781 chr3L 9130560 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134341 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-362_75b 287 chr3L 9164702 9164725 chr3L 9166169 9166192 hobo 4 1467 1.5 0.0 0.8 2.2 1490 chr3L 9164702 intron Rdl - chr3L 9165447 intron Rdl - chr3L 9166192 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-362_75b 288 chr3L 9359597 9359619 chr3L 9359688 9359710 8 91 0.5 2.0 1.2 3.6 113 chr3L 9359597 3` UTR CG32039 + chr3L 9359654 3` UTR CG32039 + chr3L 9359710 3` UTR CG32039 + chr3L_8_9355001 chr3L_9355001 RAL-362_75b 289 chr3L 9510946 9510957 chr3L 9511024 9511036 4 78 0.0 3.5 1.8 1.4 90 chr3L 9510946 intron RpS9 - chr3L 9510991 intron RpS9 - chr3L 9511036 intron RpS9 - chr3L_4_9510001 chr3L_9510001 RAL-362_75b 290 chr3L 9520122 9520139 chr3L 9520624 9520641 4 504 1.0 1.5 1.2 1.8 519 chr3L 9520122 intron CG33700 - chr3L 9520382 intron CG33700 - chr3L 9520641 intron CG33700 - chr3L_4_9520001 chr3L_9520001 RAL-362_75b 291 chr3L 9635576 9635607 chr3L 9635653 9635683 4 76 0.5 1.0 0.8 2.2 107 chr3L 9635576 intron fry - chr3L 9635630 intron fry - chr3L 9635683 exon fry - chr3L_4_9635001 chr3L_9635001 RAL-362_75b 292 chr3L 9907879 9907893 chr3L 9907956 9907970 4 77 2.0 1.0 1.5 1.6 91 chr3L 9907879 intergenic CG34356 + chr3L 9907924 intergenic CG34356 + chr3L 9907970 intergenic CG34356 + chr3L_4_9905001 chr3L_9905001 RAL-362_75b 293 chr3L 9918884 9918905 chr3L 9918979 9918998 4 94 1.5 1.5 1.5 1.6 114 chr3L 9918884 intron CG34356 + chr3L 9918941 intron CG34356 + chr3L 9918998 intron CG34356 + chr3L_4_9915001 chr3L_9915001 RAL-362_75b 294 chr3L 10417567 10417593 chr3L 10417643 10417670 5 76 1.5 2.0 1.8 1.8 103 chr3L 10417567 intergenic not near genes chr3L 10417618 intergenic not near genes chr3L 10417670 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-362_75b 295 chr3L 10578717 10578750 chr3L 10578815 10578848 5 98 1.5 2.5 2.0 1.7 131 chr3L 10578717 intron A2bp1 + chr3L 10578782 intron A2bp1 + chr3L 10578848 intron A2bp1 + chr3L_5_10575001 chr3L_10575001 RAL-362_75b 296 chr3L 10611319 10611340 chr3L 10611395 10611416 4 76 0.5 2.5 1.5 1.6 97 chr3L 10611319 intergenic not near genes chr3L 10611368 intergenic not near genes chr3L 10611416 intergenic not near genes chr3L_4_10610001 chr3L_10610001 RAL-362_75b 297 chr3L 10621853 10621872 chr3L 10621939 10621959 5 86 1.5 1.0 1.2 2.3 106 chr3L 10621853 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621959 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-362_75b 298 chr3L 10658179 10658201 chr3L 10658306 10658328 4 127 0.5 1.0 0.8 2.2 149 chr3L 10658179 intron CG32066 - chr3L 10658254 intron CG32066 - chr3L 10658328 intron CG32066 - chr3L_4_10655001 chr3L_10655001 RAL-362_75b 299 chr3L 10868804 10868823 chr3L 10868886 10868904 4 82 0.0 0.5 0.2 3.3 100 chr3L 10868804 intron tna + chr3L 10868854 intron tna + chr3L 10868904 intron tna + chr3L_4_10865001 chr3L_10865001 RAL-362_75b 300 chr3L 10937850 10937877 chr3L 10937927 10937954 4 77 0.5 1.5 1.0 2.0 104 chr3L 10937850 intergenic not near genes chr3L 10937902 intergenic not near genes chr3L 10937954 intergenic not near genes chr3L_4_10935001 chr3L_10935001 RAL-362_75b 301 chr3L 11849338 11849352 chr3L 11849438 11849452 4 100 1.0 1.0 1.0 2.0 114 chr3L 11849338 intergenic not near genes chr3L 11849395 intergenic not near genes chr3L 11849452 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-362_75b 302 chr3L 12089090 12089112 chr3L 12089170 12089192 7 80 0.0 0.0 0.0 7.0 102 chr3L 12089090 3` UTR CG17154 + chr3L 12089141 3` UTR CG17154 + chr3L 12089192 3` UTR CG17154 + chr3L_7_12085001 chr3L_12085001 RAL-362_75b 303 chr3L 12234323 12234347 chr3L 12234412 12234436 5 89 2.0 1.5 1.8 1.8 113 chr3L 12234323 intron app - chr3L 12234380 intron app - chr3L 12234436 intron app - chr3L_5_12230001 chr3L_12230001 RAL-362_75b 304 chr3L 12262914 12262942 chr3L 12263020 12263048 4 106 0.5 0.5 0.5 2.7 134 chr3L 12262914 intron app - chr3L 12262981 intron app - chr3L 12263048 intron app - chr3L_4_12260001 chr3L_12260001 RAL-362_75b 305 chr3L 12565420 12565442 chr3L 12565498 12565522 6 80 2.0 1.5 1.8 2.1 102 chr3L 12565420 intron sowah - chr3L 12565471 intron sowah - chr3L 12565522 intron sowah - chr3L_6_12565001 chr3L_12565001 RAL-362_75b 306 chr3L 12919064 12919095 chr3L 12919181 12919212 4 117 1.0 1.5 1.2 1.8 148 chr3L 12919064 intergenic not near genes chr3L 12919138 intergenic not near genes chr3L 12919212 intergenic not near genes chr3L_4_12915001 chr3L_12915001 RAL-362_75b 307 chr3L 12955144 12955157 chr3L 12955220 12955233 4 76 0.5 1.5 1.0 2.0 89 chr3L 12955144 intergenic CG10752 - chr3L 12955188 intergenic not near genes chr3L 12955233 intergenic not near genes chr3L_4_12955001 chr3L_12955001 RAL-362_75b 308 chr3L 12957796 12957818 chr3L 12962278 12962299 copia 6 4481 2.0 3.5 2.8 1.6 4503 chr3L 12957796 intergenic not near genes chr3L 12960048 intergenic not near genes chr3L 12962299 intergenic not near genes chr3L_6_12960001 chr3L_12960001 RAL-362_75b 309 chr3L 13007699 13007727 chr3L 13007778 13007806 5 79 1.0 0.5 0.8 2.8 107 chr3L 13007699 exon CG11263 + chr3L 13007752 3` UTR CG11263 + chr3L 13007806 3` UTR CG11263 + chr3L_5_13005001 chr3L_13005001 RAL-362_75b 310 chr3L 13154114 13154135 chr3L 13154195 13154216 4 79 1.5 1.0 1.2 1.8 102 chr3L 13154114 intergenic not near genes chr3L 13154165 intergenic not near genes chr3L 13154216 intergenic not near genes chr3L_4_13150001 chr3L_13150001 RAL-362_75b 311 chr3L 13166275 13166299 chr3L 13166355 13166379 4 80 0.5 0.5 0.5 2.7 104 chr3L 13166275 intergenic not near genes chr3L 13166327 intergenic not near genes chr3L 13166379 intergenic not near genes chr3L_4_13165001 chr3L_13165001 RAL-362_75b 312 chr3L 13525172 13525189 chr3L 13532968 13532985 roo 4 7796 1.5 3.5 2.5 1.1 7813 chr3L 13525172 intergenic not near genes chr3L 13529078 intergenic not near genes chr3L 13532985 intergenic not near genes chr3L_4_13525001 chr3L_13525001 RAL-362_75b 313 chr3L 13605336 13605362 chr3L 13605415 13605439 5 79 0.5 1.5 1.0 2.5 103 chr3L 13605336 intron bru-3 - chr3L 13605388 intron bru-3 - chr3L 13605439 intron bru-3 - chr3L_5_13605001 chr3L_13605001 RAL-362_75b 314 chr3L 13677531 13677746 chr3L 13677608 13677902 5 109 0.0 0.5 0.2 4.2 371 chr3L 13677531 intron bru-3 - chr3L 13677716 intron bru-3 - chr3L 13677902 intron bru-3 - chr3L_5_13675001 chr3L_13675001 RAL-362_75b 315 chr3L 14267383 14267393 chr3L 14271823 14271833 F-element 4 4440 0.0 0.5 0.2 3.3 4450 chr3L 14267383 intergenic not near genes chr3L 14269608 intergenic not near genes chr3L 14271833 intergenic not near genes chr3L_4_14265001 chr3L_14265001 RAL-362_75b 316 chr3L 14282600 14282604 chr3L 14282680 14282683 4 79 0.0 1.0 0.5 2.7 83 chr3L 14282600 intron fz + chr3L 14282642 intron fz + chr3L 14282683 intron fz + chr3L_4_14280001 chr3L_14280001 RAL-362_75b 317 chr3L 14295982 14296011 chr3L 14296468 14296496 roo 5 486 1.0 0.5 0.8 2.8 514 chr3L 14295982 intron fz + chr3L 14296239 intron fz + chr3L 14296496 intron fz + chr3L_5_14295001 chr3L_14295001 RAL-362_75b 318 chr3L 14432590 14432613 chr3L 14432754 14432777 5 164 2.0 3.0 2.5 1.4 187 chr3L 14432590 intron bbg - chr3L 14432684 intron bbg - chr3L 14432777 intron bbg - chr3L_5_14430001 chr3L_14430001 RAL-362_75b 319 chr3L 14740893 14740915 chr3L 14740982 14741004 5 89 1.5 1.0 1.2 2.3 111 chr3L 14740893 intron ome + chr3L 14740948 intron ome + chr3L 14741004 intron ome + chr3L_5_14740001 chr3L_14740001 RAL-362_75b 320 chr3L 14917663 14917690 chr3L 14917746 14917773 5 83 2.0 2.5 2.2 1.6 110 chr3L 14917663 intron DCX-EMAP + chr3L 14917718 intron DCX-EMAP + chr3L 14917773 intron DCX-EMAP + chr3L_5_14915001 chr3L_14915001 RAL-362_75b 321 chr3L 15295768 15295798 chr3L 15298611 15298641 gypsy5 4 2843 2.0 0.5 1.2 1.8 2873 chr3L 15295768 intergenic not near genes chr3L 15297204 intergenic not near genes chr3L 15298641 intergenic Best4 + chr3L_4_15295001 chr3L_15295001 RAL-362_75b 322 chr3L 15399846 15399870 chr3L 15399997 15400021 5 150 0.5 1.0 0.8 2.8 175 chr3L 15399846 intergenic not near genes chr3L 15399934 intergenic not near genes chr3L 15400021 intergenic not near genes chr3L_5_15395001 chr3L_15395001 RAL-362_75b 323 chr3L 15444667 15444677 chr3L 15444761 15444771 5 94 3.0 1.0 2.0 1.7 104 chr3L 15444667 intergenic not near genes chr3L 15444719 intergenic not near genes chr3L 15444771 intergenic not near genes chr3L_5_15440001 chr3L_15440001 RAL-362_75b 324 chr3L 15944058 15944072 chr3L 15944168 15944183 4 111 0.5 1.5 1.0 2.0 125 chr3L 15944058 intron Pka-C3 - chr3L 15944120 intron Pka-C3 - chr3L 15944183 intron Pka-C3 - chr3L_4_15940001 chr3L_15940001 RAL-362_75b 325 chr3L 16184105 16184141 chr3L 16188923 16188960 X-element 5 4819 0.5 0.0 0.2 4.2 4855 chr3L 16184105 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188960 intergenic not near genes chr3L_5_16185001 chr3L_16185001 RAL-362_75b 326 chr3L 16333051 16333073 chr3L 16333127 16333150 6 77 0.0 2.0 1.0 3.0 99 chr3L 16333051 intergenic CG13056 +,retinin + chr3L 16333100 intergenic CG13056 +,retinin + chr3L 16333150 intergenic CG13056 +,retinin + chr3L_6_16330001 chr3L_16330001 RAL-362_75b 327 chr3L 16540053 16540080 chr3L 16540141 16540167 9 88 2.0 1.0 1.5 3.6 114 chr3L 16540053 intron CG43373 - chr3L 16540110 intron CG43373 - chr3L 16540167 intron CG43373 - chr3L_9_16540001 chr3L_16540001 RAL-362_75b 328 chr3L 16632827 16632835 chr3L 16633232 16633239 4 405 0.5 1.0 0.8 2.2 412 chr3L 16632827 intron Abl - chr3L 16633033 intron Abl - chr3L 16633239 intron Abl - chr3L_4_16630001 chr3L_16630001 RAL-362_75b 329 chr3L 16684026 16684046 chr3L 16689247 16689267 copia 4 5221 0.5 1.0 0.8 2.2 5241 chr3L 16684026 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689267 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 RAL-362_75b 330 chr3L 16714844 16714870 chr3L 16714928 16714954 5 84 1.0 0.0 0.5 3.3 110 chr3L 16714844 intron Dab + chr3L 16714899 intron Dab + chr3L 16714954 intron Dab + chr3L_5_16710001 chr3L_16710001 RAL-362_75b 331 chr3L 16757223 16757240 chr3L 16757369 16757386 4 146 2.0 1.0 1.5 1.6 163 chr3L 16757223 intergenic not near genes chr3L 16757304 intergenic not near genes chr3L 16757386 intergenic not near genes chr3L_4_16755001 chr3L_16755001 RAL-362_75b 332 chr3L 16818768 16818780 chr3L 16818844 16818856 4 76 2.5 3.0 2.8 1.1 88 chr3L 16818768 intron,intron nudC +,CG13024 - chr3L 16818812 intron,intron nudC +,CG13024 - chr3L 16818856 intron,intron nudC +,CG13024 - chr3L_4_16815001 chr3L_16815001 RAL-362_75b 333 chr3L 16870878 16870898 chr3L 16870969 16870989 4 91 0.0 0.5 0.2 3.3 111 chr3L 16870878 intron Lmpt + chr3L 16870934 intron Lmpt + chr3L 16870989 intron Lmpt + chr3L_4_16870001 chr3L_16870001 RAL-362_75b 334 chr3L 17026799 17026823 chr3L 17026879 17026904 7 80 0.0 1.5 0.8 3.9 105 chr3L 17026799 exon Fit2 + chr3L 17026852 3` UTR Fit2 + chr3L 17026904 3` UTR Fit2 + chr3L_7_17025001 chr3L_17025001 RAL-362_75b 335 chr3L 17133681 17133702 chr3L 17134074 17134096 5 394 3.5 0.5 2.0 1.7 415 chr3L 17133681 intron Rbp6 - chr3L 17133888 intron Rbp6 - chr3L 17134096 intron Rbp6 - chr3L_5_17130001 chr3L_17130001 RAL-362_75b 336 chr3L 17516981 17517002 chr3L 17524539 17524560 412 4 7558 1.5 2.0 1.8 1.4 7579 chr3L 17516981 intron CG7564 + chr3L 17520770 intron CG7564 + chr3L 17524560 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-362_75b 337 chr3L 18152735 18152755 chr3L 18152845 18152865 4 110 1.0 0.0 0.5 2.7 130 chr3L 18152735 intron CG7330 + chr3L 18152800 intron CG7330 + chr3L 18152865 intron CG7330 + chr3L_4_18150001 chr3L_18150001 RAL-362_75b 338 chr3L 18223172 18223186 chr3L 18223255 18223269 4 83 0.5 0.0 0.2 3.3 97 chr3L 18223172 intergenic not near genes chr3L 18223220 intergenic not near genes chr3L 18223269 intergenic not near genes chr3L_4_18220001 chr3L_18220001 RAL-362_75b 339 chr3L 18248955 18248986 chr3L 18249053 18249084 5 98 0.5 0.5 0.5 3.3 129 chr3L 18248955 intergenic not near genes chr3L 18249020 intergenic not near genes chr3L 18249084 intergenic not near genes chr3L_5_18245001 chr3L_18245001 RAL-362_75b 340 chr3L 18267842 18267867 chr3L 18267919 18267941 4 76 0.5 1.5 1.0 2.0 99 chr3L 18267842 intergenic not near genes chr3L 18267892 intergenic not near genes chr3L 18267941 intergenic not near genes chr3L_4_18265001 chr3L_18265001 RAL-362_75b 341 chr3L 18590270 18590285 chr3L 18590352 18590367 5 82 0.0 2.0 1.0 2.5 97 chr3L 18590270 intergenic CG7271 + chr3L 18590318 intergenic CG7271 + chr3L 18590367 intergenic CG7271 + chr3L_5_18590001 chr3L_18590001 RAL-362_75b 342 chr3L 18607851 18607874 chr3L 18607973 18607996 4 122 1.5 2.0 1.8 1.4 145 chr3L 18607851 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L 18607924 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L 18607996 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L_4_18605001 chr3L_18605001 RAL-362_75b 343 chr3L 18656187 18656205 chr3L 18656272 18656290 4 84 2.5 0.5 1.5 1.6 103 chr3L 18656187 intron MYPT-75D + chr3L 18656238 intron MYPT-75D + chr3L 18656290 intron MYPT-75D + chr3L_4_18655001 chr3L_18655001 RAL-362_75b 344 chr3L 18721771 18721805 chr3L 18721861 18721896 5 91 0.0 0.5 0.2 4.2 125 chr3L 18721771 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721896 3` UTR CG12477 - chr3L_5_18720001 chr3L_18720001 RAL-362_75b 345 chr3L 18772420 18772442 chr3L 18781101 18781123 roo 4 8681 0.0 1.5 0.8 2.2 8703 chr3L 18772420 intron ftz-f1 - chr3L 18776772 intron ftz-f1 - chr3L 18781123 intron ftz-f1 - chr3L_4_18775001 chr3L_18775001 RAL-362_75b 346 chr3L 18969600 18969628 chr3L 18969695 18969722 5 95 0.5 2.5 1.5 2.0 122 chr3L 18969600 intergenic not near genes chr3L 18969661 intergenic not near genes chr3L 18969722 intergenic not near genes chr3L_5_18965001 chr3L_18965001 RAL-362_75b 347 chr3L 19029457 19029479 chr3L 19029557 19029581 7 101 0.5 1.0 0.8 3.9 124 chr3L 19029457 intron nkd - chr3L 19029519 intron nkd - chr3L 19029581 intron nkd - chr3L_7_19025001 chr3L_19025001 RAL-362_75b 348 chr3L 19082041 19082065 chr3L 19082143 19082165 7 102 1.0 1.0 1.0 3.5 124 chr3L 19082041 intron Mkp3 - chr3L 19082103 intron Mkp3 - chr3L 19082165 intron Mkp3 - chr3L_7_19080001 chr3L_19080001 RAL-362_75b 349 chr3L 19117042 19117075 chr3L 19124489 19124522 mdg1 8 7447 0.5 0.0 0.2 6.7 7480 chr3L 19117042 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124522 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-362_75b 350 chr3L 19208057 19208088 chr3L 19209431 19209462 Doc 5 1374 1.0 1.0 1.0 2.5 1405 chr3L 19208057 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209462 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-362_75b 351 chr3L 19527928 19527958 chr3L 19528005 19528036 5 78 1.0 1.5 1.2 2.3 108 chr3L 19527928 intergenic not near genes chr3L 19527982 intergenic not near genes chr3L 19528036 intergenic not near genes chr3L_5_19525001 chr3L_19525001 RAL-362_75b 352 chr3L 20057562 20057588 chr3L 20057675 20057701 5 113 0.0 1.5 0.8 2.8 139 chr3L 20057562 intergenic not near genes chr3L 20057632 intergenic not near genes chr3L 20057701 intergenic not near genes chr3L_5_20055001 chr3L_20055001 RAL-362_75b 353 chr3L 20113659 20113685 chr3L 20122916 20122942 roo 5 9257 1.5 0.5 1.0 2.5 9283 chr3L 20113659 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122942 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-362_75b 354 chr3L 20395162 20395181 chr3L 20395261 20395279 5 99 1.0 1.0 1.0 2.5 117 chr3L 20395162 intergenic CR45677 - chr3L 20395220 intergenic CR45677 - chr3L 20395279 intergenic CR45677 - chr3L_5_20395001 chr3L_20395001 RAL-362_75b 355 chr3L 21044425 21044454 chr3L 21044523 21044552 5 98 1.0 1.5 1.2 2.3 127 chr3L 21044425 intron siz + chr3L 21044488 intron siz + chr3L 21044552 intron siz + chr3L_5_21040001 chr3L_21040001 RAL-362_75b 356 chr3L 21093784 21093808 chr3L 21093893 21093921 6 112 2.0 0.0 1.0 3.0 137 chr3L 21093784 intron ko - chr3L 21093852 intron ko - chr3L 21093921 intron ko - chr3L_6_21090001 chr3L_21090001 RAL-362_75b 357 chr3L 21301734 21301757 chr3L 21301819 21301843 6 86 1.5 1.5 1.5 2.4 109 chr3L 21301734 5` UTR CR45432 + chr3L 21301788 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301843 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_6_21300001 chr3L_21300001 RAL-362_75b 358 chr3L 21306153 21306170 chr3L 21315312 21315329 roo 5 9159 2.0 1.5 1.8 1.8 9176 chr3L 21306153 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310741 intron Pc - chr3L 21315329 3` UTR Pc - chr3L_5_21310001 chr3L_21310001 RAL-362_75b 359 chr3L 21319527 21319557 chr3L 21319617 21319647 4 90 0.5 0.5 0.5 2.7 120 chr3L 21319527 5` UTR Rab26 + chr3L 21319587 5` UTR Rab26 + chr3L 21319647 5` UTR Rab26 + chr3L_4_21315001 chr3L_21315001 RAL-362_75b 360 chr3L 21415139 21415165 chr3L 21415222 21415247 4 83 0.5 2.0 1.2 1.8 108 chr3L 21415139 intron rgn + chr3L 21415193 intron rgn + chr3L 21415247 intron rgn + chr3L_4_21415001 chr3L_21415001 RAL-362_75b 361 chr3L 4341332 4341333 chr3L 21448027 21448027 4 17106695 5.5 5.0 5.2 0.6 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_4_12890001 chr3L_12890001 RAL-362_75b 362 chr3L 21637327 21637355 chr3L 21637414 21637442 4 87 0.0 1.0 0.5 2.7 115 chr3L 21637327 intron CG32444 + chr3L 21637384 intron CG32444 + chr3L 21637442 intron CG32444 + chr3L_4_21635001 chr3L_21635001 RAL-362_75b 363 chr3L 21769068 21769084 chr3L 21769155 21769171 5 86 0.5 2.5 1.5 2.0 103 chr3L 21769068 intron,intron Syn1 -,CG42689 + chr3L 21769120 intron,intron Syn1 -,CG42689 + chr3L 21769171 intron,intron Syn1 -,CG42689 + chr3L_5_21765001 chr3L_21765001 RAL-362_75b 364 chr3L 21824503 21824517 chr3L 21824602 21824616 5 99 1.5 1.0 1.2 2.3 113 chr3L 21824503 3` UTR CG7407 + chr3L 21824560 3` UTR CG7407 + chr3L 21824616 intergenic CG7407 +,CG7414 + chr3L_5_21820001 chr3L_21820001 RAL-362_75b 365 chr3L 21950339 21950356 chr3L 21950410 21950433 4 75 1.5 1.0 1.2 1.8 94 chr3L 21950339 exon CG7448 + chr3L 21950386 exon CG7448 + chr3L 21950433 intron CG7448 + chr3L_4_21950001 chr3L_21950001 RAL-362_75b 366 chr3L 22008852 22008874 chr3L 22008929 22008951 8 77 0.0 1.5 0.8 4.4 99 chr3L 22008852 intergenic not near genes chr3L 22008902 intergenic not near genes chr3L 22008951 intergenic not near genes chr3L_8_22005001 chr3L_22005001 RAL-362_75b 367 chr3L 22570425 22570454 chr3L 22570568 22570598 6 144 3.0 1.0 2.0 2.0 173 chr3L 22570425 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570598 intergenic not near genes chr3L_6_22570001 chr3L_22570001 RAL-362_75b 368 chr3L 22577629 22577648 chr3L 22582416 22582436 Doc 8 4788 0.5 1.0 0.8 4.4 4807 chr3L 22577629 intergenic not near genes chr3L 22580032 intergenic not near genes chr3L 22582436 3` UTR CG14459 - chr3L_8_22580001 chr3L_22580001 RAL-362_75b 369 chr3L 22617192 22617220 chr3L 22624644 22624672 blood 6 7452 2.0 1.5 1.8 2.1 7480 chr3L 22617192 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624672 intron CG14459 - chr3L_6_22620001 chr3L_22620001 RAL-362_75b 370 chr3L 22909028 22909043 chr3L 22909119 22909134 4 91 0.5 0.5 0.5 2.7 106 chr3L 22909028 intergenic CR45661 + chr3L 22909081 intergenic CR45661 + chr3L 22909134 intergenic CR45661 + chr3L_4_22905001 chr3L_22905001 RAL-362_75b 371 chr3L 22997073 22997082 chr3L 22997158 22997167 4 85 2.0 0.0 1.0 2.0 94 chr3L 22997073 intergenic not near genes chr3L 22997120 intergenic not near genes chr3L 22997167 intergenic not near genes chr3L_4_22995001 chr3L_22995001 RAL-362_75b 372 chr3L 23875537 23875552 chr3L 23875618 23875633 4 80 0.5 3.0 1.8 1.4 96 chr3L 23875537 intron CG40470 - chr3L 23875585 intron CG40470 - chr3L 23875633 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-362_75b 373 chr3L 24012404 24012437 chr3L 24020745 24020778 roo 5 8341 0.5 1.0 0.8 2.8 8374 chr3L 24012404 intergenic not near genes chr3L 24016591 intergenic not near genes chr3L 24020778 intergenic not near genes chr3L_5_24015001 chr3L_24015001 RAL-362_75b 374 chr3L 24168797 24168822 chr3L 24176125 24176149 ZAM 5 7327 0.5 3.0 1.8 1.8 7352 chr3L 24168797 intron Snap25 + chr3L 24172473 intron Snap25 + chr3L 24176149 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-362_75b 375 chr3L 25331640 25331646 chr3L 25331727 25331737 4 90 2.0 0.5 1.2 1.8 97 chr3L 25331640 intergenic not near genes chr3L 25331688 intergenic not near genes chr3L 25331737 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-362_75b 376 chr3L 25513576 25513605 chr3L 25513655 25513684 4 79 1.0 0.5 0.8 2.2 108 chr3L 25513576 intron CG41343 - chr3L 25513630 intron CG41343 - chr3L 25513684 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-362_75b 377 chr3L 27727643 27727652 chr3L 27728745 27728759 G-element 4 1106 1.5 1.0 1.2 1.8 1116 chr3L 27727643 intergenic not near genes chr3L 27728201 intergenic not near genes chr3L 27728759 intergenic not near genes chr3L_4_27725001 chr3L_27725001 RAL-362_75b 378 chr3R 2534143 2534163 chr3R 2541712 2541732 4 7569 5.5 5.5 5.5 0.6 7589 chr3R 2534143 intergenic not near genes chr3R 2537938 intergenic not near genes chr3R 2541732 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-362_75b 379 chr3R 4408412 4408439 chr3R 4412715 4412741 Juan 4 4303 1.0 1.0 1.0 2.0 4329 chr3R 4408412 intron CG32944 - chr3R 4410576 intron CG32944 - chr3R 4412741 intron CG32944 - chr3R_4_4410001 chr3R_4410001 RAL-362_75b 380 chr3R 4527583 4527612 chr3R 4528133 4528162 5 550 1.5 0.0 0.8 2.8 579 chr3R 4527583 intron CG34357 - chr3R 4527872 intron CG34357 - chr3R 4528162 intron CG34357 - chr3R_5_4525001 chr3R_4525001 RAL-362_75b 381 chr3R 4753250 4753270 chr3R 4757553 4757573 F-element 4 4303 0.5 2.5 1.5 1.6 4323 chr3R 4753250 intron,intron atms +,CG44098 - chr3R 4755412 intron,intron atms +,CG44098 - chr3R 4757573 intron,exon atms +,CG44098 - chr3R_4_4755001 chr3R_4755001 RAL-362_75b 382 chr3R 4861569 4861583 chr3R 4861650 4861660 4 80 1.5 2.0 1.8 1.4 91 chr3R 4861569 intron opa + chr3R 4861614 intron opa + chr3R 4861660 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-362_75b 383 chr3R 5038743 5038774 chr3R 5038825 5038856 7 82 1.0 1.5 1.2 3.2 113 chr3R 5038743 intergenic not near genes chr3R 5038800 intergenic not near genes chr3R 5038856 intergenic not near genes chr3R_7_5035001 chr3R_5035001 RAL-362_75b 384 chr3R 5338402 5338427 chr3R 5343576 5343604 Rt1c 4 5176 2.5 3.5 3.0 1.0 5202 chr3R 5338402 intron mtd - chr3R 5341003 intron mtd - chr3R 5343604 intron mtd - chr3R_4_5340001 chr3R_5340001 RAL-362_75b 385 chr3R 5385972 5386002 chr3R 5386143 5386173 5 171 0.5 1.0 0.8 2.8 201 chr3R 5385972 intron kkv - chr3R 5386072 intron kkv - chr3R 5386173 intron kkv - chr3R_5_5385001 chr3R_5385001 RAL-362_75b 386 chr3R 5765634 5765655 chr3R 5765718 5765738 7 83 1.5 1.5 1.5 2.8 104 chr3R 5765634 intron CG2082 - chr3R 5765686 intron CG2082 - chr3R 5765738 intron CG2082 - chr3R_7_5765001 chr3R_5765001 RAL-362_75b 387 chr3R 5775925 5775947 chr3R 5776573 5776595 4 648 3.0 1.0 2.0 1.3 670 chr3R 5775925 intron CG2082 - chr3R 5776260 intron CG2082 - chr3R 5776595 intron CG2082 - chr3R_4_5775001 chr3R_5775001 RAL-362_75b 388 chr3R 5809113 5809142 chr3R 5809354 5809383 pogo 4 240 0.5 0.5 0.5 2.7 270 chr3R 5809113 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809383 3` UTR CG11000 + chr3R_4_5805001 chr3R_5805001 RAL-362_75b 389 chr3R 5931850 5931871 chr3R 5931924 5931947 4 75 1.0 1.5 1.2 1.8 97 chr3R 5931850 intron CG34113 - chr3R 5931898 intron CG34113 - chr3R 5931947 intron CG34113 - chr3R_4_5930001 chr3R_5930001 RAL-362_75b 390 chr3R 5954323 5954343 chr3R 5954399 5954415 5 75 1.0 0.5 0.8 2.8 92 chr3R 5954323 intron CG34113 - chr3R 5954369 intron CG34113 - chr3R 5954415 intron CG34113 - chr3R_5_5950001 chr3R_5950001 RAL-362_75b 391 chr3R 6015974 6015989 chr3R 6024475 6024490 Tirant 6 8501 1.0 0.0 0.5 4.0 8516 chr3R 6015974 intergenic not near genes chr3R 6020232 intergenic not near genes chr3R 6024490 intergenic not near genes chr3R_6_6020001 chr3R_6020001 RAL-362_75b 392 chr3R 6316784 6316810 chr3R 6316877 6316898 4 92 0.0 0.5 0.2 3.3 114 chr3R 6316784 intron Osi17 + chr3R 6316841 intron Osi17 + chr3R 6316898 intron Osi17 + chr3R_4_6315001 chr3R_6315001 RAL-362_75b 393 chr3R 6510030 6510055 chr3R 6515111 6515136 jockey 5 5081 1.0 2.5 1.8 1.8 5106 chr3R 6510030 intergenic not near genes chr3R 6512583 intergenic not near genes chr3R 6515136 intergenic not near genes chr3R_5_6510001 chr3R_6510001 RAL-362_75b 394 chr3R 6780449 6780472 chr3R 6780532 6780555 4 83 0.0 0.5 0.2 3.3 106 chr3R 6780449 intergenic not near genes chr3R 6780502 intergenic not near genes chr3R 6780555 intergenic not near genes chr3R_4_6780001 chr3R_6780001 RAL-362_75b 395 chr3R 7206880 7206905 chr3R 7206968 7206994 4 89 0.5 1.0 0.8 2.2 114 chr3R 7206880 intergenic CG1288 - chr3R 7206937 intergenic CG1288 - chr3R 7206994 intergenic CG1288 - chr3R_4_7205001 chr3R_7205001 RAL-362_75b 396 chr3R 7635665 7635682 chr3R 7635748 7635765 4 83 0.0 1.5 0.8 2.2 100 chr3R 7635665 intron CG34127 - chr3R 7635715 intron CG34127 - chr3R 7635765 intron CG34127 - chr3R_4_7635001 chr3R_7635001 RAL-362_75b 397 chr3R 7857647 7857666 chr3R 7857728 7857749 5 83 1.0 0.5 0.8 2.8 102 chr3R 7857647 3` UTR CG17816 - chr3R 7857698 3` UTR CG17816 - chr3R 7857749 3` UTR CG17816 - chr3R_5_7855001 chr3R_7855001 RAL-362_75b 398 chr3R 7955941 7955968 chr3R 7956018 7956040 6 76 1.0 0.5 0.8 3.3 99 chr3R 7955941 intron dsx - chr3R 7955990 intron dsx - chr3R 7956040 intron dsx - chr3R_6_7955001 chr3R_7955001 RAL-362_75b 399 chr3R 7993195 7993218 chr3R 7993293 7993316 4 98 0.0 1.0 0.5 2.7 121 chr3R 7993195 intron CG2781 - chr3R 7993256 intron CG2781 - chr3R 7993316 intron CG2781 - chr3R_4_7990001 chr3R_7990001 RAL-362_75b 400 chr3R 8207561 8207585 chr3R 8208406 8208430 F-element 5 845 0.5 1.0 0.8 2.8 869 chr3R 8207561 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208430 intergenic not near genes chr3R_5_8205001 chr3R_8205001 RAL-362_75b 401 chr3R 8339246 8339246 chr3R 21907535 21907535 5 13568289 5.0 4.0 4.5 0.9 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-362_75b 402 chr3R 8339247 8339247 chr3R 21907534 21907535 4 13568288 5.0 3.5 4.2 0.8 13568288 chr3R 8339247 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-362_75b 403 chr3R 8403015 8403026 chr3R 8412181 8412192 roo 5 9166 2.0 1.5 1.8 1.8 9177 chr3R 8403015 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412192 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-362_75b 404 chr3R 8455626 8455644 chr3R 8455706 8455724 6 80 1.0 1.0 1.0 3.0 98 chr3R 8455626 intron CG45263 - chr3R 8455675 intron CG45263 - chr3R 8455724 intron CG45263 - chr3R_6_8455001 chr3R_8455001 RAL-362_75b 405 chr3R 8707365 8707384 chr3R 8709806 8709825 jockey 5 2441 1.5 3.0 2.2 1.6 2460 chr3R 8707365 intergenic not near genes chr3R 8708595 intergenic not near genes chr3R 8709825 intergenic not near genes chr3R_5_8705001 chr3R_8705001 RAL-362_75b 406 chr3R 8798653 8798681 chr3R 8798736 8798764 4 83 1.0 0.5 0.8 2.2 111 chr3R 8798653 intron,intron Pif1A -,Pif1B - chr3R 8798708 intron,intron Pif1A -,Pif1B - chr3R 8798764 intron,intron Pif1A -,Pif1B - chr3R_4_8795001 chr3R_8795001 RAL-362_75b 407 chr3R 8856369 8856396 chr3R 8856446 8856473 5 77 0.0 1.0 0.5 3.3 104 chr3R 8856369 intron pyd - chr3R 8856421 intron pyd - chr3R 8856473 intron pyd - chr3R_5_8855001 chr3R_8855001 RAL-362_75b 408 chr3R 9141158 9141163 chr3R 9141247 9141251 4 89 2.5 1.0 1.8 1.4 93 chr3R 9141158 intron pum - chr3R 9141204 intron pum - chr3R 9141251 intron pum - chr3R_4_9140001 chr3R_9140001 RAL-362_75b 409 chr3R 9202844 9202869 chr3R 9202933 9202957 4 89 0.5 0.5 0.5 2.7 113 chr3R 9202844 intron pum - chr3R 9202900 intron pum - chr3R 9202957 intron pum - chr3R_4_9200001 chr3R_9200001 RAL-362_75b 410 chr3R 9319574 9319595 chr3R 9320008 9320030 jockey 4 435 1.5 1.5 1.5 1.6 456 chr3R 9319574 intron CG8861 - chr3R 9319802 intron CG8861 - chr3R 9320030 intron CG8861 - chr3R_4_9315001 chr3R_9315001 RAL-362_75b 411 chr3R 9384750 9384784 chr3R 9384878 9384912 9 127 1.0 2.0 1.5 3.6 162 chr3R 9384750 intron FER - chr3R 9384831 intron FER - chr3R 9384912 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-362_75b 412 chr3R 9899016 9899043 chr3R 9899114 9899141 4 98 1.0 0.0 0.5 2.7 125 chr3R 9899016 intron Glut4EF + chr3R 9899078 intron Glut4EF + chr3R 9899141 intron Glut4EF + chr3R_4_9895001 chr3R_9895001 RAL-362_75b 413 chr3R 10817223 10817226 chr3R 10817306 10817309 4 83 3.0 1.5 2.2 1.2 86 chr3R 10817223 3` UTR CG4089 + chr3R 10817266 3` UTR CG4089 + chr3R 10817309 3` UTR CG4089 + chr3R_4_10815001 chr3R_10815001 RAL-362_75b 414 chr3R 11085466 11085486 chr3R 11085543 11085562 4 77 0.0 2.5 1.2 1.8 96 chr3R 11085466 3` UTR CR44940 - chr3R 11085514 intergenic CR44940 - chr3R 11085562 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-362_75b 415 chr3R 11181853 11181877 chr3R 11181983 11182007 5 130 1.5 0.5 1.0 2.5 154 chr3R 11181853 intergenic not near genes chr3R 11181930 intergenic not near genes chr3R 11182007 intergenic not near genes chr3R_5_11180001 chr3R_11180001 RAL-362_75b 416 chr3R 11242254 11242271 chr3R 11242343 11242359 5 88 1.5 2.5 2.0 1.7 105 chr3R 11242254 3` UTR CG17734 - chr3R 11242306 3` UTR CG17734 - chr3R 11242359 3` UTR CG17734 - chr3R_5_11240001 chr3R_11240001 RAL-362_75b 417 chr3R 11325343 11325355 chr3R 11325438 11325447 4 94 1.5 0.5 1.0 2.0 104 chr3R 11325343 intergenic not near genes chr3R 11325395 intergenic not near genes chr3R 11325447 intergenic not near genes chr3R_4_11325001 chr3R_11325001 RAL-362_75b 418 chr3R 11710206 11710231 chr3R 11710284 11710308 4 77 1.0 1.0 1.0 2.0 102 chr3R 11710206 intergenic not near genes chr3R 11710257 intergenic not near genes chr3R 11710308 intergenic not near genes chr3R_4_11710001 chr3R_11710001 RAL-362_75b 419 chr3R 12047032 12047058 chr3R 12047125 12047151 9 93 1.5 1.0 1.2 4.1 119 chr3R 12047032 intergenic not near genes chr3R 12047092 intergenic not near genes chr3R 12047151 intergenic not near genes chr3R_9_12045001 chr3R_12045001 RAL-362_75b 420 chr3R 12202289 12202318 chr3R 12202398 12202427 6 109 1.0 1.5 1.2 2.7 138 chr3R 12202289 intergenic not near genes chr3R 12202358 intergenic not near genes chr3R 12202427 intergenic not near genes chr3R_6_12200001 chr3R_12200001 RAL-362_75b 421 chr3R 12344131 12344138 chr3R 12344208 12344214 4 77 1.0 1.0 1.0 2.0 83 chr3R 12344131 intergenic not near genes chr3R 12344172 intergenic not near genes chr3R 12344214 intergenic not near genes chr3R_4_12340001 chr3R_12340001 RAL-362_75b 422 chr3R 12599003 12599031 chr3R 12599143 12599171 4 140 1.5 3.0 2.2 1.2 168 chr3R 12599003 intergenic not near genes chr3R 12599087 intergenic not near genes chr3R 12599171 intergenic not near genes chr3R_4_12595001 chr3R_12595001 RAL-362_75b 423 chr3R 12621901 12621916 chr3R 12621988 12622003 4 87 0.5 0.5 0.5 2.7 102 chr3R 12621901 intergenic not near genes chr3R 12621952 intergenic not near genes chr3R 12622003 intergenic not near genes chr3R_4_12620001 chr3R_12620001 RAL-362_75b 424 chr3R 12733478 12733498 chr3R 12733554 12733575 5 77 0.5 1.5 1.0 2.5 97 chr3R 12733478 intergenic not near genes chr3R 12733526 intergenic not near genes chr3R 12733575 intergenic not near genes chr3R_5_12730001 chr3R_12730001 RAL-362_75b 425 chr3R 12739053 12739069 chr3R 12739129 12739145 4 75 1.5 2.5 2.0 1.3 92 chr3R 12739053 intergenic not near genes chr3R 12739099 intergenic not near genes chr3R 12739145 intergenic CG5724 + chr3R_4_12735001 chr3R_12735001 RAL-362_75b 426 chr3R 13356099 13356122 chr3R 13356184 13356207 5 85 3.5 1.0 2.2 1.6 108 chr3R 13356099 intergenic not near genes chr3R 13356153 intergenic not near genes chr3R 13356207 intergenic not near genes chr3R_5_13355001 chr3R_13355001 RAL-362_75b 427 chr3R 13391635 13391669 chr3R 13391713 13391747 5 78 0.5 0.0 0.2 4.2 112 chr3R 13391635 intron CCHa2 - chr3R 13391691 intron CCHa2 - chr3R 13391747 intron CCHa2 - chr3R_5_13390001 chr3R_13390001 RAL-362_75b 428 chr3R 13672945 13672967 chr3R 13673023 13673044 5 78 1.0 1.5 1.2 2.3 99 chr3R 13672945 intron Task6 - chr3R 13672994 intron Task6 - chr3R 13673044 intron Task6 - chr3R_5_13670001 chr3R_13670001 RAL-362_75b 429 chr3R 14075007 14075034 chr3R 14075104 14075130 4 96 1.0 1.0 1.0 2.0 123 chr3R 14075007 intron foxo + chr3R 14075068 intron foxo + chr3R 14075130 intron foxo + chr3R_4_14075001 chr3R_14075001 RAL-362_75b 430 chr3R 14246392 14246417 chr3R 14247888 14247911 jockey 6 1496 0.5 2.0 1.2 2.7 1519 chr3R 14246392 intergenic not near genes chr3R 14247152 intergenic not near genes chr3R 14247911 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-362_75b 431 chr3R 14350484 14350512 chr3R 14350624 14350652 4 140 1.5 0.0 0.8 2.2 168 chr3R 14350484 intron NK7.1 - chr3R 14350568 intron NK7.1 - chr3R 14350652 intron NK7.1 - chr3R_4_14350001 chr3R_14350001 RAL-362_75b 432 chr3R 14363725 14363741 chr3R 14363807 14363823 7 82 0.5 2.0 1.2 3.2 98 chr3R 14363725 intron NK7.1 - chr3R 14363774 intron NK7.1 - chr3R 14363823 intron NK7.1 - chr3R_7_14360001 chr3R_14360001 RAL-362_75b 433 chr3R 14535765 14535778 chr3R 14535841 14535853 4 76 2.5 0.5 1.5 1.6 88 chr3R 14535765 intron Pde6 - chr3R 14535809 intron Pde6 - chr3R 14535853 intron Pde6 - chr3R_4_14535001 chr3R_14535001 RAL-362_75b 434 chr3R 14549045 14549055 chr3R 14549131 14549142 7 87 1.5 1.0 1.2 3.2 97 chr3R 14549045 intron Pde6 - chr3R 14549094 intron Pde6 - chr3R 14549142 intron Pde6 - chr3R_7_14545001 chr3R_14545001 RAL-362_75b 435 chr3R 14704388 14704408 chr3R 14704465 14704485 7 77 0.0 0.5 0.2 5.8 97 chr3R 14704388 intron kibra - chr3R 14704436 intron kibra - chr3R 14704485 intron kibra - chr3R_7_14700001 chr3R_14700001 RAL-362_75b 436 chr3R 14748148 14748171 chr3R 14748595 14748619 6 448 1.0 1.5 1.2 2.7 471 chr3R 14748148 intron,intron jvl +,smp-30 - chr3R 14748384 intron,intron jvl +,smp-30 - chr3R 14748619 intron,intron jvl +,smp-30 - chr3R_6_14745001 chr3R_14745001 RAL-362_75b 437 chr3R 14821613 14821642 chr3R 14821762 14821790 4 148 0.5 0.0 0.2 3.3 177 chr3R 14821613 intron btsz - chr3R 14821702 intron btsz - chr3R 14821790 intron btsz - chr3R_4_14820001 chr3R_14820001 RAL-362_75b 438 chr3R 15041431 15041459 chr3R 15045198 15045226 Doc 5 3768 0.0 1.5 0.8 2.8 3795 chr3R 15041431 intergenic not near genes chr3R 15043328 intergenic not near genes chr3R 15045226 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-362_75b 439 chr3R 15132056 15132076 chr3R 15135116 15135135 Juan 5 3059 1.0 2.5 1.8 1.8 3079 chr3R 15132056 intergenic CG42788 - chr3R 15133596 intergenic not near genes chr3R 15135135 intergenic CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-362_75b 440 chr3R 15286987 15286987 chr3R 21907534 21907536 4 6620548 2.5 3.5 3.0 1.0 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-362_75b 441 chr3R 15601165 15601194 chr3R 15608686 15608716 412 5 7522 1.0 1.5 1.2 2.3 7551 chr3R 15601165 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608716 intergenic not near genes chr3R_5_15600001 chr3R_15600001 RAL-362_75b 442 chr3R 15790133 15790273 chr3R 15790240 15790391 5 111 5.0 5.0 5.0 0.8 258 chr3R 15790133 exon c(3)G - chr3R 15790262 exon c(3)G - chr3R 15790391 exon c(3)G - chr3R_5_15790001 chr3R_15790001 RAL-362_75b 443 chr3R 16011056 16011072 chr3R 16011175 16011191 5 118 1.0 1.0 1.0 2.5 135 chr3R 16011056 intron GATAe + chr3R 16011124 intron GATAe + chr3R 16011191 intron GATAe + chr3R_5_16010001 chr3R_16010001 RAL-362_75b 444 chr3R 16795288 16795314 chr3R 16795378 16795404 4 90 2.5 0.0 1.2 1.8 116 chr3R 16795288 intergenic not near genes chr3R 16795346 intergenic not near genes chr3R 16795404 intergenic not near genes chr3R_4_16795001 chr3R_16795001 RAL-362_75b 445 chr3R 16921832 16921866 chr3R 16921915 16921950 4 84 0.5 1.0 0.8 2.2 118 chr3R 16921832 intron iab-8 - chr3R 16921891 intron iab-8 - chr3R 16921950 intron iab-8 - chr3R_4_16920001 chr3R_16920001 RAL-362_75b 446 chr3R 17463161 17463180 chr3R 17463246 17463265 4 85 0.5 0.5 0.5 2.7 104 chr3R 17463161 intergenic not near genes chr3R 17463213 intergenic not near genes chr3R 17463265 intergenic not near genes chr3R_4_17460001 chr3R_17460001 RAL-362_75b 447 chr3R 17823207 17823228 chr3R 17823283 17823305 4 77 0.5 1.0 0.8 2.2 98 chr3R 17823207 intron tinc + chr3R 17823256 intron tinc + chr3R 17823305 intron tinc + chr3R_4_17820001 chr3R_17820001 RAL-362_75b 448 chr3R 17993736 17993767 chr3R 17993834 17993866 4 98 0.0 0.0 0.0 4.0 130 chr3R 17993736 intron cpo + chr3R 17993801 intron cpo + chr3R 17993866 intron cpo + chr3R_4_17990001 chr3R_17990001 RAL-362_75b 449 chr3R 18346368 18346381 chr3R 18346486 18346501 4 120 1.0 3.0 2.0 1.3 133 chr3R 18346368 intron CG15803 - chr3R 18346434 intron CG15803 - chr3R 18346501 intron CG15803 - chr3R_4_18345001 chr3R_18345001 RAL-362_75b 450 chr3R 18682325 18682342 chr3R 18682412 18682429 5 87 1.5 1.0 1.2 2.3 104 chr3R 18682325 intron CG7708 + chr3R 18682377 5` UTR CG7708 + chr3R 18682429 5` UTR CG7708 + chr3R_5_18680001 chr3R_18680001 RAL-362_75b 451 chr3R 19140269 19140301 chr3R 19140717 19140749 7 448 0.5 1.5 1.0 3.5 480 chr3R 19140269 3` UTR Ppcs - chr3R 19140509 3` UTR Ppcs - chr3R 19140749 3` UTR Ppcs - chr3R_7_19140001 chr3R_19140001 RAL-362_75b 452 chr3R 19389307 19389325 chr3R 19389452 19389470 4 145 2.5 2.5 2.5 1.1 163 chr3R 19389307 intron,intron Ino80 -,CG3734 + chr3R 19389388 intron,exon Ino80 -,CG3734 + chr3R 19389470 intron,exon Ino80 -,CG3734 + chr3R_4_19385001 chr3R_19385001 RAL-362_75b 453 chr3R 19602758 19602791 chr3R 19602836 19602869 9 78 0.5 0.0 0.2 7.5 111 chr3R 19602758 intergenic CG7333 + chr3R 19602814 intergenic CG7333 + chr3R 19602869 intergenic CG7333 + chr3R_9_19600001 chr3R_19600001 RAL-362_75b 454 chr3R 19633291 19633314 chr3R 19633373 19633396 4 82 1.0 0.0 0.5 2.7 105 chr3R 19633291 intergenic subdued - chr3R 19633344 intergenic subdued - chr3R 19633396 intergenic subdued - chr3R_4_19630001 chr3R_19630001 RAL-362_75b 455 chr3R 19721558 19721561 chr3R 19721822 19721825 4 264 2.5 2.0 2.2 1.2 267 chr3R 19721558 intergenic not near genes chr3R 19721692 intergenic not near genes chr3R 19721825 intergenic not near genes chr3R_4_19720001 chr3R_19720001 RAL-362_75b 456 chr3R 19793907 19793920 chr3R 19794000 19794013 4 93 1.0 2.5 1.8 1.4 106 chr3R 19793907 intergenic bnl - chr3R 19793960 intergenic bnl - chr3R 19794013 intergenic bnl - chr3R_4_19790001 chr3R_19790001 RAL-362_75b 457 chr3R 20099301 20099325 chr3R 20099393 20099417 4 92 2.0 1.5 1.8 1.4 116 chr3R 20099301 intergenic not near genes chr3R 20099359 intergenic not near genes chr3R 20099417 intergenic not near genes chr3R_4_20095001 chr3R_20095001 RAL-362_75b 458 chr3R 20109537 20109568 chr3R 20114743 20114774 copia 8 5206 1.0 0.5 0.8 4.4 5237 chr3R 20109537 intergenic not near genes chr3R 20112156 intergenic not near genes chr3R 20114774 intergenic CG10887 + chr3R_8_20110001 chr3R_20110001 RAL-362_75b 459 chr3R 20124569 20124599 chr3R 20124656 20124685 6 87 1.5 0.0 0.8 3.3 116 chr3R 20124569 intergenic not near genes chr3R 20124627 intergenic not near genes chr3R 20124685 intergenic not near genes chr3R_6_20120001 chr3R_20120001 RAL-362_75b 460 chr3R 20331000 20331032 chr3R 20331486 20331518 roo 5 486 0.0 0.5 0.2 4.2 518 chr3R 20331000 intergenic Sirt2 + chr3R 20331259 intergenic Sirt2 + chr3R 20331518 intergenic not near genes chr3R_5_20330001 chr3R_20330001 RAL-362_75b 461 chr3R 20434845 20434856 chr3R 20435030 20435041 5 185 0.5 0.5 0.5 3.3 196 chr3R 20434845 intron Gfrl - chr3R 20434943 intron Gfrl - chr3R 20435041 intron Gfrl - chr3R_5_20430001 chr3R_20430001 RAL-362_75b 462 chr3R 20467075 20467112 chr3R 20467151 20467188 9 75 1.0 0.5 0.8 5.0 113 chr3R 20467075 intron Gfrl - chr3R 20467132 intron Gfrl - chr3R 20467188 intron Gfrl - chr3R_9_20465001 chr3R_20465001 RAL-362_75b 463 chr3R 20503430 20503452 chr3R 20504119 20504141 5 689 0.5 1.0 0.8 2.8 711 chr3R 20503430 exon MtnB - chr3R 20503786 intergenic MtnB - chr3R 20504141 intergenic not near genes chr3R_5_20500001 chr3R_20500001 RAL-362_75b 464 chr3R 20901654 20901681 chr3R 20901757 20901784 8 103 0.5 0.5 0.5 5.3 130 chr3R 20901654 intergenic CG5621 + chr3R 20901719 intergenic CG5621 + chr3R 20901784 intergenic CG5621 + chr3R_8_20900001 chr3R_20900001 RAL-362_75b 465 chr3R 21154549 21154584 chr3R 21154754 21154799 5 213 2.0 0.0 1.0 2.5 250 chr3R 21154549 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154799 intron SNF4Agamma + chr3R_5_21150001 chr3R_21150001 RAL-362_75b 466 chr3R 21519987 21520105 chr3R 21520088 21520199 4 99 0.5 0.5 0.5 2.7 212 chr3R 21519987 intergenic not near genes chr3R 21520093 intergenic not near genes chr3R 21520199 intergenic not near genes chr3R_4_21520001 chr3R_21520001 RAL-362_75b 467 chr3R 21907534 21907534 chr3R 28831799 28831802 11 6924267 4.0 3.5 3.8 2.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-362_75b 468 chr3R 8339246 8339247 chr3R 21907535 21907535 4 13568288 5.0 4.0 4.5 0.7 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-362_75b 469 chr3R 9620956 9620981 chr3R 21907535 21907535 4 12286573 2.0 4.0 3.0 1.0 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-362_75b 470 chr3R 21907535 21907535 chr3R 28831801 28831803 33 6924266 4.0 3.5 3.8 6.9 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_33_25365001 chr3R_25365001 RAL-362_75b 471 chr3R 21907536 21907536 chr3R 28831801 28831803 31 6924266 3.5 3.5 3.5 6.9 6924267 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831803 intron WASp - chr3R_31_25365001 chr3R_25365001 RAL-362_75b 472 chr3R 22055502 22055538 chr3R 22055584 22055619 6 82 1.0 0.5 0.8 3.3 117 chr3R 22055502 intron how + chr3R 22055560 intron how + chr3R 22055619 intron how + chr3R_6_22055001 chr3R_22055001 RAL-362_75b 473 chr3R 22330603 22330623 chr3R 22332309 22332328 5 1706 9.0 8.0 8.5 0.5 1725 chr3R 22330603 intergenic CG7080 +,CG33721 + chr3R 22331466 exon CG33721 + chr3R 22332328 exon CG13862 + chr3R_5_22330001 chr3R_22330001 RAL-362_75b 474 chr3R 22450547 22450574 chr3R 22453187 22453212 NOF 6 2640 0.0 0.5 0.2 5.0 2665 chr3R 22450547 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453212 intron CG34376 + chr3R_6_22450001 chr3R_22450001 RAL-362_75b 475 chr3R 22769095 22769109 chr3R 22769172 22769186 4 77 2.5 1.5 2.0 1.3 91 chr3R 22769095 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769140 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769186 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_4_22765001 chr3R_22765001 RAL-362_75b 476 chr3R 22797763 22797929 chr3R 22797849 22798025 6 91 0.0 0.0 0.0 6.0 262 chr3R 22797763 intergenic not near genes chr3R 22797894 intergenic not near genes chr3R 22798025 intergenic not near genes chr3R_6_22795001 chr3R_22795001 RAL-362_75b 477 chr3R 22827422 22827447 chr3R 22827498 22827523 6 76 1.0 1.0 1.0 3.0 101 chr3R 22827422 intergenic CR44350 - chr3R 22827472 intergenic CR44350 - chr3R 22827523 intergenic CR44350 - chr3R_6_22825001 chr3R_22825001 RAL-362_75b 478 chr3R 22846799 22846824 chr3R 22847020 22847043 5 221 0.5 1.0 0.8 2.8 244 chr3R 22846799 intergenic CG4704 - chr3R 22846921 intergenic not near genes chr3R 22847043 intergenic not near genes chr3R_5_22845001 chr3R_22845001 RAL-362_75b 479 chr3R 22916863 22916871 chr3R 22918493 22918501 4 1630 0.0 2.5 1.2 1.8 1638 chr3R 22916863 intron klg + chr3R 22917682 intron klg + chr3R 22918501 intron klg + chr3R_4_22915001 chr3R_22915001 RAL-362_75b 480 chr3R 22927872 22927906 chr3R 22927967 22928001 9 94 0.0 2.0 1.0 4.5 129 chr3R 22927872 intron klg + chr3R 22927936 intron klg + chr3R 22928001 intron klg + chr3R_9_22925001 chr3R_22925001 RAL-362_75b 481 chr3R 23145167 23145195 chr3R 23145244 23145272 5 77 1.0 1.0 1.0 2.5 105 chr3R 23145167 intergenic not near genes chr3R 23145220 intergenic not near genes chr3R 23145272 intergenic not near genes chr3R_5_23145001 chr3R_23145001 RAL-362_75b 482 chr3R 23239258 23239273 chr3R 23239353 23239368 4 95 1.5 2.0 1.8 1.4 110 chr3R 23239258 intron CG4467 - chr3R 23239313 intron CG4467 - chr3R 23239368 intron CG4467 - chr3R_4_23235001 chr3R_23235001 RAL-362_75b 483 chr3R 23335447 23335462 chr3R 23335525 23335540 4 78 1.5 1.5 1.5 1.6 93 chr3R 23335447 intron pnt - chr3R 23335494 intron pnt - chr3R 23335540 intron pnt - chr3R_4_23335001 chr3R_23335001 RAL-362_75b 484 chr3R 23385600 23385613 chr3R 23385722 23385735 4 122 1.0 1.5 1.2 1.8 135 chr3R 23385600 intergenic not near genes chr3R 23385668 intergenic not near genes chr3R 23385735 intergenic not near genes chr3R_4_23385001 chr3R_23385001 RAL-362_75b 485 chr3R 23558412 23558426 chr3R 23560193 23560207 Bari1 4 1781 1.5 1.0 1.2 1.8 1795 chr3R 23558412 intron beat-IV + chr3R 23559310 intron beat-IV + chr3R 23560207 intron beat-IV + chr3R_4_23555001 chr3R_23555001 RAL-362_75b 486 chr3R 23644834 23644857 chr3R 23645105 23645129 4 272 1.0 0.5 0.8 2.2 295 chr3R 23644834 intron CG31145 - chr3R 23644982 intron CG31145 - chr3R 23645129 intron CG31145 - chr3R_4_23640001 chr3R_23640001 RAL-362_75b 487 chr3R 23784909 23785194 chr3R 23784986 23785273 7 78 0.5 2.5 1.5 2.8 364 chr3R 23784909 intron mbc + chr3R 23785091 intron mbc + chr3R 23785273 intron mbc + chr3R_7_23785001 chr3R_23785001 RAL-362_75b 488 chr3R 23835407 23835433 chr3R 23844557 23844583 roo 4 9150 0.5 0.0 0.2 3.3 9176 chr3R 23835407 intron CG34355 + chr3R 23839995 intron CG34355 + chr3R 23844583 intron CG34355 + chr3R_4_23835001 chr3R_23835001 RAL-362_75b 489 chr3R 23896699 23896733 chr3R 23896784 23896818 11 85 0.0 1.0 0.5 7.3 119 chr3R 23896699 3` UTR sba - chr3R 23896758 3` UTR sba - chr3R 23896818 exon sba - chr3R_11_23895001 chr3R_23895001 RAL-362_75b 490 chr3R 23944913 23944934 chr3R 23944998 23945019 4 85 0.5 1.5 1.0 2.0 106 chr3R 23944913 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945019 exon CG12268 - chr3R_4_23940001 chr3R_23940001 RAL-362_75b 491 chr3R 24085488 24085513 chr3R 24085575 24085601 8 87 1.0 1.5 1.2 3.6 113 chr3R 24085488 intron 4EHP - chr3R 24085544 intron 4EHP - chr3R 24085601 intron 4EHP - chr3R_8_24085001 chr3R_24085001 RAL-362_75b 492 chr3R 24426291 24426316 chr3R 24426548 24426573 5 257 0.0 2.0 1.0 2.5 282 chr3R 24426291 intron nAChRalpha1 - chr3R 24426432 intron nAChRalpha1 - chr3R 24426573 intron nAChRalpha1 - chr3R_5_24425001 chr3R_24425001 RAL-362_75b 493 chr3R 24431604 24431623 chr3R 24431683 24431701 4 79 1.5 1.0 1.2 1.8 97 chr3R 24431604 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431701 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-362_75b 494 chr3R 24466997 24467015 chr3R 24467094 24467112 4 97 0.0 2.0 1.0 2.0 115 chr3R 24466997 intergenic not near genes chr3R 24467054 intergenic not near genes chr3R 24467112 intergenic not near genes chr3R_4_24465001 chr3R_24465001 RAL-362_75b 495 chr3R 24670065 24670193 chr3R 24670175 24670278 5 95 0.0 0.0 0.0 5.0 213 chr3R 24670065 intron slo + chr3R 24670172 intron slo + chr3R 24670278 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-362_75b 496 chr3R 24730089 24730119 chr3R 24732467 24732497 Doc 7 2378 1.0 0.0 0.5 4.7 2408 chr3R 24730089 intron tok + chr3R 24731293 intron tok + chr3R 24732497 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-362_75b 497 chr3R 24789984 24790002 chr3R 24790129 24790147 6 145 2.0 1.5 1.8 2.1 163 chr3R 24789984 intron,5` UTR Ets96B +,CG13634 - chr3R 24790066 intron,5` UTR Ets96B +,CG13634 - chr3R 24790147 intron Ets96B + chr3R_6_24790001 chr3R_24790001 RAL-362_75b 498 chr3R 24855672 24855696 chr3R 24856195 24856219 5 523 0.5 0.5 0.5 3.3 547 chr3R 24855672 exon HdacX - chr3R 24855946 intron HdacX - chr3R 24856219 5` UTR HdacX - chr3R_5_24855001 chr3R_24855001 RAL-362_75b 499 chr3R 25422061 25422096 chr3R 25422142 25422177 4 81 0.5 0.0 0.2 3.3 116 chr3R 25422061 intron Fur1 - chr3R 25422119 intron Fur1 - chr3R 25422177 intron Fur1 - chr3R_4_25420001 chr3R_25420001 RAL-362_75b 500 chr3R 25512406 25512424 chr3R 25512485 25512503 5 79 0.5 2.5 1.5 2.0 97 chr3R 25512406 intergenic not near genes chr3R 25512454 intergenic not near genes chr3R 25512503 intergenic not near genes chr3R_5_25510001 chr3R_25510001 RAL-362_75b 501 chr3R 25765877 25765903 chr3R 25765956 25765982 4 78 1.5 0.0 0.8 2.2 105 chr3R 25765877 intergenic not near genes chr3R 25765930 intergenic not near genes chr3R 25765982 intergenic not near genes chr3R_4_25765001 chr3R_25765001 RAL-362_75b 502 chr3R 26294728 26294736 chr3R 26294804 26294813 4 77 1.5 3.0 2.2 1.2 85 chr3R 26294728 intergenic not near genes chr3R 26294770 intergenic not near genes chr3R 26294813 intergenic not near genes chr3R_4_26290001 chr3R_26290001 RAL-362_75b 503 chr3R 26542058 26542078 chr3R 26542149 26542169 4 91 0.5 0.5 0.5 2.7 111 chr3R 26542058 intron scrib + chr3R 26542114 intron scrib + chr3R 26542169 intron scrib + chr3R_4_26540001 chr3R_26540001 RAL-362_75b 504 chr3R 27140526 27140548 chr3R 27148135 27148158 412 5 7610 0.5 1.0 0.8 2.8 7632 chr3R 27140526 intron CG6051 - chr3R 27144342 intron CG6051 - chr3R 27148158 intron CG6051 - chr3R_5_27140001 chr3R_27140001 RAL-362_75b 505 chr3R 27470042 27470056 chr3R 27470704 27470718 5 661 2.5 1.5 2.0 1.7 676 chr3R 27470042 intergenic not near genes chr3R 27470380 intergenic not near genes chr3R 27470718 intergenic not near genes chr3R_5_27470001 chr3R_27470001 RAL-362_75b 506 chr3R 27731201 27731223 chr3R 27731282 27731304 4 81 1.0 2.5 1.8 1.4 103 chr3R 27731201 intergenic not near genes chr3R 27731252 intergenic not near genes chr3R 27731304 intergenic not near genes chr3R_4_27730001 chr3R_27730001 RAL-362_75b 507 chr3R 27875701 27875733 chr3R 27882756 27882788 297 6 7055 1.0 1.5 1.2 2.7 7087 chr3R 27875701 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882788 intron CG34353 - chr3R_6_27875001 chr3R_27875001 RAL-362_75b 508 chr3R 28103331 28103349 chr3R 28103424 28103442 5 93 1.0 1.0 1.0 2.5 111 chr3R 28103331 intergenic not near genes chr3R 28103386 intergenic not near genes chr3R 28103442 intergenic not near genes chr3R_5_28100001 chr3R_28100001 RAL-362_75b 509 chr3R 28173361 28173371 chr3R 28173459 28173469 4 98 1.5 0.5 1.0 2.0 108 chr3R 28173361 intron CG34354 + chr3R 28173415 intron CG34354 + chr3R 28173469 intron CG34354 + chr3R_4_28170001 chr3R_28170001 RAL-362_75b 510 chr3R 28390115 28390136 chr3R 28390193 28390214 5 77 0.5 0.5 0.5 3.3 99 chr3R 28390115 intergenic not near genes chr3R 28390164 intergenic not near genes chr3R 28390214 intergenic not near genes chr3R_5_28390001 chr3R_28390001 RAL-362_75b 511 chr3R 28484353 28484371 chr3R 28486270 28486291 33 1918 19.0 37.5 28.2 1.1 1938 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486291 intergenic CG1894 + chr3R_33_28485001 chr3R_28485001 RAL-362_75b 512 chr3R 28744536 28744542 chr3R 28744680 28744687 4 144 2.5 0.5 1.5 1.6 151 chr3R 28744536 5` UTR AstA-R2 - chr3R 28744612 5` UTR AstA-R2 - chr3R 28744687 5` UTR AstA-R2 - chr3R_4_28740001 chr3R_28740001 RAL-362_75b 513 chr3R 21907534 21907536 chr3R 28831799 28831802 54 6924266 3.5 3.5 3.5 12.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_54_25365001 chr3R_25365001 RAL-362_75b 514 chr3R 28922770 28922777 chr3R 28922844 28922853 4 75 0.5 0.0 0.2 3.3 83 chr3R 28922770 3` UTR Doa + chr3R 28922812 intergenic Doa +,CG11828 + chr3R 28922853 intergenic Doa +,CG11828 + chr3R_4_28920001 chr3R_28920001 RAL-362_75b 515 chr3R 29406620 29406643 chr3R 29407906 29407929 jockey 6 1286 1.0 0.5 0.8 3.3 1309 chr3R 29406620 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407929 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-362_75b 516 chr3R 29449369 29449389 chr3R 29449447 29449464 4 77 0.0 2.5 1.2 1.8 95 chr3R 29449369 intron Ptp99A + chr3R 29449416 intron Ptp99A + chr3R 29449464 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-362_75b 517 chr3R 29702152 29702155 chr3R 29702233 29702236 4 81 1.0 0.0 0.5 2.7 84 chr3R 29702152 intergenic not near genes chr3R 29702194 intergenic not near genes chr3R 29702236 intergenic not near genes chr3R_4_29700001 chr3R_29700001 RAL-362_75b 518 chr3R 29831815 29831839 chr3R 29831900 29831923 7 85 0.5 1.0 0.8 3.9 108 chr3R 29831815 exon Atg16 - chr3R 29831869 intron Atg16 - chr3R 29831923 exon Atg16 - chr3R_7_29830001 chr3R_29830001 RAL-362_75b 519 chr3R 30013685 30013698 chr3R 30013766 30013781 4 82 0.0 3.5 1.8 1.4 96 chr3R 30013685 intron CG7920 - chr3R 30013733 intron CG7920 - chr3R 30013781 intron CG7920 - chr3R_4_30010001 chr3R_30010001 RAL-362_75b 520 chr3R 30170759 30170781 chr3R 30170845 30170868 4 87 1.5 0.5 1.0 2.0 109 chr3R 30170759 intron CG31028 - chr3R 30170814 intron CG31028 - chr3R 30170868 intron CG31028 - chr3R_4_30170001 chr3R_30170001 RAL-362_75b 521 chr3R 30285891 30285910 chr3R 30286116 30286136 5 226 0.5 0.0 0.2 4.2 245 chr3R 30285891 intron hdc + chr3R 30286014 intron hdc + chr3R 30286136 intron hdc + chr3R_5_30285001 chr3R_30285001 RAL-362_75b 522 chr3R 30396217 30396240 chr3R 30404483 30404506 roo 7 8266 3.0 2.0 2.5 2.0 8289 chr3R 30396217 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404506 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-362_75b 523 chr3R 30473677 30473703 chr3R 30473793 30473819 4 116 0.5 0.5 0.5 2.7 142 chr3R 30473677 intron PH4alphaEFB + chr3R 30473748 intron PH4alphaEFB + chr3R 30473819 intron PH4alphaEFB + chr3R_4_30470001 chr3R_30470001 RAL-362_75b 524 chr3R 30627610 30627638 chr3R 30627690 30627718 6 80 1.0 1.5 1.2 2.7 108 chr3R 30627610 exon CG2267 - chr3R 30627664 exon CG2267 - chr3R 30627718 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-362_75b 525 chr3R 30850249 30850267 chr3R 30850340 30850359 4 92 0.5 1.0 0.8 2.2 110 chr3R 30850249 intergenic not near genes chr3R 30850304 intergenic not near genes chr3R 30850359 intergenic not near genes chr3R_4_30850001 chr3R_30850001 RAL-362_75b 526 chr3R 30888925 30888948 chr3R 30893452 30893476 6 4527 10.5 9.5 10.0 0.5 4551 chr3R 30888925 exon Sap-r - chr3R 30891200 intergenic not near genes chr3R 30893476 intergenic not near genes chr3R_6_30890001 chr3R_30890001 RAL-362_75b 527 chr3R 31042116 31042135 chr3R 31042203 31042222 4 87 2.5 1.5 2.0 1.3 106 chr3R 31042116 intron CanA1 + chr3R 31042169 intron CanA1 + chr3R 31042222 intron CanA1 + chr3R_4_31040001 chr3R_31040001 RAL-362_75b 528 chr3R 31426893 31426912 chr3R 31426985 31427003 4 92 1.0 2.5 1.8 1.4 110 chr3R 31426893 intron Gprk2 + chr3R 31426948 intron Gprk2 + chr3R 31427003 intron Gprk2 + chr3R_4_31425001 chr3R_31425001 RAL-362_75b 529 chr3R 31442275 31442291 chr3R 31442359 31442376 4 85 1.0 2.0 1.5 1.6 101 chr3R 31442275 intron Gprk2 + chr3R 31442326 intron Gprk2 + chr3R 31442376 intron Gprk2 + chr3R_4_31440001 chr3R_31440001 RAL-362_75b 530 chr3R 31507745 31507770 chr3R 31508169 31508194 4 424 1.0 0.0 0.5 2.7 449 chr3R 31507745 intergenic not near genes chr3R 31507970 intergenic not near genes chr3R 31508194 intergenic not near genes chr3R_4_31505001 chr3R_31505001 RAL-362_75b 531 chr3R 31610122 31610143 chr3R 31610208 31610229 4 86 0.5 0.0 0.2 3.3 107 chr3R 31610122 intron CycG - chr3R 31610176 intron CycG - chr3R 31610229 intron CycG - chr3R_4_31610001 chr3R_31610001 RAL-362_75b 532 chr3R 31699723 31699741 chr3R 31699805 31699822 4 82 0.0 1.5 0.8 2.2 99 chr3R 31699723 intergenic not near genes chr3R 31699772 intergenic not near genes chr3R 31699822 intergenic not near genes chr3R_4_31695001 chr3R_31695001 RAL-362_75b 533 chr3R 31911691 31911707 chr3R 31911777 31911793 4 86 0.5 0.5 0.5 2.7 102 chr3R 31911691 intron heph - chr3R 31911742 intron heph - chr3R 31911793 intron heph - chr3R_4_31910001 chr3R_31910001 RAL-362_75b 534 chr3R 31997998 31998025 chr3R 32005465 32005495 blood 5 7469 0.5 0.0 0.2 4.2 7497 chr3R 31997998 intron heph - chr3R 32001746 intron heph - chr3R 32005495 intron heph - chr3R_5_32000001 chr3R_32000001 RAL-362_75b 535 chr3R 32016710 32016730 chr3R 32016789 32016809 4 78 0.5 1.0 0.8 2.2 99 chr3R 32016710 5` UTR CR45557 + chr3R 32016760 5` UTR CR45557 + chr3R 32016809 5` UTR CR45557 + chr3R_4_32015001 chr3R_32015001 RAL-362_75b 536 chr4 257404 257438 chr4 257574 257608 6 170 1.0 1.0 1.0 3.0 204 chr4 257404 exon RhoGAP102A + chr4 257506 intron RhoGAP102A + chr4 257608 intron RhoGAP102A + chr4_6_255001 chr4_255001 RAL-362_75b 537 chr4 959625 959657 chr4 959804 959836 5 179 0.5 1.5 1.0 2.5 211 chr4 959625 intergenic CR44030 +,CR45201 - chr4 959730 5` UTR CR44030 + chr4 959836 5` UTR CR44030 + chr4_5_955001 chr4_955001 RAL-362_75b 538 chrX 494605 494620 chrX 494697 494712 4 92 0.5 1.5 1.0 2.0 107 chrX 494605 intergenic CG17778 + chrX 494658 5` UTR CG17778 + chrX 494712 5` UTR CG17778 + chrX_4_490001 chrX_490001 RAL-362_75b 539 chrX 547633 547659 chrX 547877 547903 4 243 1.5 0.5 1.0 2.0 270 chrX 547633 intron Appl + chrX 547768 intron Appl + chrX 547903 intron Appl + chrX_4_545001 chrX_545001 RAL-362_75b 540 chrX 551425 551442 chrX 558985 559004 412 6 7560 1.5 0.0 0.8 3.3 7579 chrX 551425 intron Appl + chrX 555214 intron Appl + chrX 559004 intron Appl + chrX_6_555001 chrX_555001 RAL-362_75b 541 chrX 680838 680864 chrX 680920 680945 5 82 0.0 1.5 0.8 2.8 107 chrX 680838 intergenic not near genes chrX 680892 intergenic not near genes chrX 680945 intergenic not near genes chrX_5_680001 chrX_680001 RAL-362_75b 542 chrX 868506 868518 chrX 868582 868595 4 76 1.0 2.5 1.8 1.4 89 chrX 868506 intron CG43867 - chrX 868550 intron CG43867 - chrX 868595 intron CG43867 - chrX_4_865001 chrX_865001 RAL-362_75b 543 chrX 1627975 1628000 chrX 1635443 1635466 gtwin 4 7468 2.0 1.0 1.5 1.6 7491 chrX 1627975 intron,intron Mur2B -,br + chrX 1631720 intron,intron Mur2B -,br + chrX 1635466 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-362_75b 544 chrX 2353525 2353540 chrX 2353610 2353625 4 85 1.0 2.5 1.8 1.4 100 chrX 2353525 intron ptr - chrX 2353575 intron ptr - chrX 2353625 intron ptr - chrX_4_2350001 chrX_2350001 RAL-362_75b 545 chrX 2440202 2440228 chrX 2440295 2440323 6 94 0.5 1.5 1.0 3.0 121 chrX 2440202 intergenic not near genes chrX 2440262 intergenic not near genes chrX 2440323 intergenic not near genes chrX_6_2440001 chrX_2440001 RAL-362_75b 546 chrX 3107232 3107233 chrX 16983076 16983077 4 13875844 1.5 2.0 1.8 1.4 13875845 chrX 3107232 intron kirre + chrX 10045154 intron,3` UTR Cht6 +,CR45185 - chrX 16983077 intron CG45002 - chrX_4_10045001 chrX_10045001 RAL-362_75b 547 chrX 3657416 3657444 chrX 3657496 3657524 7 80 0.5 1.5 1.0 3.5 108 chrX 3657416 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657524 intron AstA-R1 + chrX_7_3655001 chrX_3655001 RAL-362_75b 548 chrX 3986866 3986895 chrX 3994499 3994528 412 4 7633 0.0 2.0 1.0 2.0 7662 chrX 3986866 intergenic not near genes chrX 3990697 intergenic not near genes chrX 3994528 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-362_75b 549 chrX 4157897 4157922 chrX 4164950 4164975 297 6 7053 0.5 0.0 0.2 5.0 7078 chrX 4157897 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4164975 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-362_75b 550 chrX 5264044 5264067 chrX 5264134 5264157 5 90 0.5 0.0 0.2 4.2 113 chrX 5264044 intergenic not near genes chrX 5264100 intergenic not near genes chrX 5264157 intergenic not near genes chrX_5_5260001 chrX_5260001 RAL-362_75b 551 chrX 5884163 5884193 chrX 5884404 5884432 pogo 5 240 0.0 1.0 0.5 3.3 269 chrX 5884163 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884432 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-362_75b 552 chrX 6171587 6171601 chrX 6179020 6179034 Quasimodo 5 7433 1.0 1.0 1.0 2.5 7447 chrX 6171587 intron Ca-alpha1T - chrX 6175310 intron Ca-alpha1T - chrX 6179034 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-362_75b 553 chrX 6562825 6562849 chrX 6571307 6571330 Tirant 5 8481 1.5 1.0 1.2 2.3 8505 chrX 6562825 intron CG34417 + chrX 6567078 intron CG34417 + chrX 6571330 intron CG34417 + chrX_5_6565001 chrX_6565001 RAL-362_75b 554 chrX 7023604 7023633 chrX 7030994 7031021 Tabor 5 7390 1.0 1.5 1.2 2.3 7417 chrX 7023604 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031021 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-362_75b 555 chrX 7967249 7967271 chrX 7967330 7967352 5 81 1.0 1.5 1.2 2.3 103 chrX 7967249 intron,intron sws -,sn + chrX 7967300 intron,intron sws -,sn + chrX 7967352 intron,intron sws -,sn + chrX_5_7965001 chrX_7965001 RAL-362_75b 556 chrX 8364853 8364874 chrX 8365249 8365271 BS 4 397 1.0 1.5 1.2 1.8 418 chrX 8364853 intron nAChRalpha3 - chrX 8365062 intron nAChRalpha3 - chrX 8365271 intron nAChRalpha3 - chrX_4_8365001 chrX_8365001 RAL-362_75b 557 chrX 8605313 8605348 chrX 8605390 8605425 9 77 1.0 0.0 0.5 6.0 112 chrX 8605313 exon Caf1-180 - chrX 8605369 exon Caf1-180 - chrX 8605425 exon Caf1-180 - chrX_9_8605001 chrX_8605001 RAL-362_75b 558 chrX 8708697 8708703 chrX 8708880 8708887 4 183 3.0 2.5 2.8 1.1 190 chrX 8708697 intergenic not near genes chrX 8708792 intergenic not near genes chrX 8708887 intergenic not near genes chrX_4_8705001 chrX_8705001 RAL-362_75b 559 chrX 9508135 9508167 chrX 9509653 9509685 jockey 5 1518 1.0 0.5 0.8 2.8 1550 chrX 9508135 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509685 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-362_75b 560 chrX 9575789 9575821 chrX 9576113 9576145 mdg3 4 324 0.5 1.0 0.8 2.2 356 chrX 9575789 intron,exon CG32699 -,CG42395 - chrX 9575967 intron,intron CG32699 -,CG42395 - chrX 9576145 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-362_75b 561 chrX 9875813 9875833 chrX 9875895 9875914 4 82 1.0 1.5 1.2 1.8 101 chrX 9875813 5` UTR CG15247 - chrX 9875864 5` UTR CG15247 - chrX 9875914 5` UTR CG15247 - chrX_4_9875001 chrX_9875001 RAL-362_75b 562 chrX 10150018 10150030 chrX 10150241 10150253 4 222 2.0 0.0 1.0 2.0 235 chrX 10150018 intron CR44894 - chrX 10150136 intron CR44894 - chrX 10150253 intron CR44894 - chrX_4_10150001 chrX_10150001 RAL-362_75b 563 chrX 10312676 10312708 chrX 10312908 10312940 4 232 1.0 1.0 1.0 2.0 264 chrX 10312676 intron alpha-Man-I - chrX 10312808 intron alpha-Man-I - chrX 10312940 intron alpha-Man-I - chrX_4_10310001 chrX_10310001 RAL-362_75b 564 chrX 10550853 10550888 chrX 10552320 10552355 hobo 6 1466 1.0 0.0 0.5 4.0 1502 chrX 10550853 intron spri - chrX 10551604 intron spri - chrX 10552355 intron spri - chrX_6_10550001 chrX_10550001 RAL-362_75b 565 chrX 10804051 10804071 chrX 10804127 10804148 7 77 0.5 0.5 0.5 4.7 97 chrX 10804051 intron Imp - chrX 10804100 intron Imp - chrX 10804148 intron Imp - chrX_7_10800001 chrX_10800001 RAL-362_75b 566 chrX 11096000 11096029 chrX 11103102 11103130 HMS-Beagle 4 7102 0.5 0.5 0.5 2.7 7130 chrX 11096000 intergenic not near genes chrX 11099565 intergenic not near genes chrX 11103130 intron CG42249 + chrX_4_11095001 chrX_11095001 RAL-362_75b 567 chrX 11268565 11268591 chrX 11270058 11270084 hopper2 4 1493 0.5 0.5 0.5 2.7 1519 chrX 11268565 intron CG44422 - chrX 11269324 intron CG44422 - chrX 11270084 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-362_75b 568 chrX 11922366 11922383 chrX 11922498 11922516 7 133 0.5 1.0 0.8 3.9 150 chrX 11922366 exon Sclp - chrX 11922441 intron Sclp - chrX 11922516 intron Sclp - chrX_7_11920001 chrX_11920001 RAL-362_75b 569 chrX 12176746 12176769 chrX 12176818 12176845 4 74 0.5 0.5 0.5 2.7 99 chrX 12176746 intron,3` UTR Ten-a +,CG1924 - chrX 12176796 intron,3` UTR Ten-a +,CG1924 - chrX 12176845 intron,3` UTR Ten-a +,CG1924 - chrX_4_12175001 chrX_12175001 RAL-362_75b 570 chrX 12224348 12224370 chrX 12224856 12224878 4 508 1.5 9.0 5.2 0.6 530 chrX 12224348 intron Ten-a + chrX 12224613 intron Ten-a + chrX 12224878 intron Ten-a + chrX_4_12220001 chrX_12220001 RAL-362_75b 571 chrX 12423633 12423662 chrX 12423718 12423747 5 85 0.0 0.5 0.2 4.2 114 chrX 12423633 intergenic not near genes chrX 12423690 intergenic not near genes chrX 12423747 intergenic not near genes chrX_5_12420001 chrX_12420001 RAL-362_75b 572 chrX 12752285 12752305 chrX 12752372 12752392 5 87 1.0 1.0 1.0 2.5 107 chrX 12752285 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752392 5` UTR CR44619 + chrX_5_12750001 chrX_12750001 RAL-362_75b 573 chrX 12987902 12987916 chrX 12987989 12988003 4 87 0.0 0.5 0.2 3.3 101 chrX 12987902 intergenic not near genes chrX 12987952 intergenic not near genes chrX 12988003 intergenic not near genes chrX_4_12985001 chrX_12985001 RAL-362_75b 574 chrX 14131494 14131521 chrX 14131574 14131602 5 81 1.0 1.5 1.2 2.3 108 chrX 14131494 intergenic not near genes chrX 14131548 intergenic not near genes chrX 14131602 intergenic not near genes chrX_5_14130001 chrX_14130001 RAL-362_75b 575 chrX 14778033 14778054 chrX 14782830 14782851 Doc 4 4797 1.0 0.5 0.8 2.2 4818 chrX 14778033 intergenic CG5347 + chrX 14780442 intergenic not near genes chrX 14782851 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-362_75b 576 chrX 16222787 16222803 chrX 16231136 16231153 roo 5 8350 0.5 0.0 0.2 4.2 8366 chrX 16222787 intergenic not near genes chrX 16226970 intergenic not near genes chrX 16231153 intergenic not near genes chrX_5_16225001 chrX_16225001 RAL-362_75b 577 chrX 17282876 17282893 chrX 17282954 17282970 4 78 1.5 0.0 0.8 2.2 94 chrX 17282876 intron CG5445 + chrX 17282923 5` UTR CG5445 + chrX 17282970 5` UTR CG5445 + chrX_4_17280001 chrX_17280001 RAL-362_75b 578 chrX 17508702 17508732 chrX 17508830 17508860 6 128 1.0 1.0 1.0 3.0 158 chrX 17508702 intron CG43658 - chrX 17508781 intron CG43658 - chrX 17508860 intron CG43658 - chrX_6_17505001 chrX_17505001 RAL-362_75b 579 chrX 17680890 17680925 chrX 17680965 17681002 5 76 2.5 0.0 1.2 2.3 112 chrX 17680890 intron chas - chrX 17680946 intron chas - chrX 17681002 intron chas - chrX_5_17680001 chrX_17680001 RAL-362_75b 580 chrX 18003463 18003479 chrX 18003544 18003561 6 82 0.0 1.5 0.8 3.3 98 chrX 18003463 intron Sh - chrX 18003512 intron Sh - chrX 18003561 intron Sh - chrX_6_18000001 chrX_18000001 RAL-362_75b 581 chrX 18122825 18122851 chrX 18122901 18122927 7 76 3.0 1.0 2.0 2.3 102 chrX 18122825 5` UTR CR45606 + chrX 18122876 5` UTR CR45606 + chrX 18122927 intergenic CR45606 + chrX_7_18120001 chrX_18120001 RAL-362_75b 582 chrX 18194067 18194088 chrX 18194602 18194623 BS 4 534 2.0 0.5 1.2 1.8 556 chrX 18194067 intron Frq2 + chrX 18194345 intron Frq2 + chrX 18194623 intron Frq2 + chrX_4_18190001 chrX_18190001 RAL-362_75b 583 chrX 18467226 18467257 chrX 18467390 18467421 5 164 0.0 2.5 1.2 2.3 195 chrX 18467226 intron CG32547 - chrX 18467324 intron CG32547 - chrX 18467421 intron CG32547 - chrX_5_18465001 chrX_18465001 RAL-362_75b 584 chrX 18486112 18486130 chrX 18486199 18486219 5 88 1.5 0.5 1.0 2.5 107 chrX 18486112 exon psh - chrX 18486166 intron psh - chrX 18486219 intron psh - chrX_5_18485001 chrX_18485001 RAL-362_75b 585 chrX 13057298 13057300 chrX 19242812 19242814 11 6185514 6.5 2.5 4.5 2.0 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_11_16150001 chrX_16150001 RAL-362_75b 586 chrX 19593947 19593971 chrX 19594032 19594056 5 85 1.0 1.5 1.2 2.3 109 chrX 19593947 exon CG14205 + chrX 19594002 intron CG14205 + chrX 19594056 intron CG14205 + chrX_5_19590001 chrX_19590001 RAL-362_75b 587 chrX 19710074 19710099 chrX 19711859 19711885 S-element 8 1786 1.0 0.5 0.8 4.4 1811 chrX 19710074 intron meso18E - chrX 19710980 intron meso18E - chrX 19711885 intron meso18E - chrX_8_19710001 chrX_19710001 RAL-362_75b 588 chrX 20069266 20069294 chrX 20069399 20069427 4 133 0.5 0.5 0.5 2.7 161 chrX 20069266 intergenic not near genes chrX 20069346 intergenic not near genes chrX 20069427 intergenic not near genes chrX_4_20065001 chrX_20065001 RAL-362_75b 589 chrX 20082751 20082781 chrX 20082833 20082862 4 82 1.0 0.5 0.8 2.2 111 chrX 20082751 intergenic not near genes chrX 20082806 intergenic not near genes chrX 20082862 intergenic not near genes chrX_4_20080001 chrX_20080001 RAL-362_75b 590 chrX 20105209 20105226 chrX 20105312 20105329 6 103 12.0 8.5 10.2 0.5 120 chrX 20105209 intergenic not near genes chrX 20105269 intergenic not near genes chrX 20105329 intergenic not near genes chrX_6_20105001 chrX_20105001 RAL-362_75b 591 chrX 20940718 20940750 chrX 20942187 20942219 hobo 5 1469 1.5 1.0 1.2 2.3 1501 chrX 20940718 intergenic not near genes chrX 20941468 intergenic not near genes chrX 20942219 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-362_75b 592 chrX 20956991 20957010 chrX 20962433 20962452 I-element 5 5442 0.0 1.0 0.5 3.3 5461 chrX 20956991 intergenic not near genes chrX 20959722 intergenic not near genes chrX 20962452 intergenic Ser6 - chrX_5_20955001 chrX_20955001 RAL-362_75b 593 chrX 21042555 21042590 chrX 21045340 21045375 4 2785 5.5 9.5 7.5 0.5 2820 chrX 21042555 exon Mgstl + chrX 21043965 exon,3` UTR Mgstl +,CR44431 - chrX 21045375 intron Cbs + chrX_4_21040001 chrX_21040001 RAL-362_75b 594 chrX 21358078 21358092 chrX 21358158 21358172 5 80 1.5 0.5 1.0 2.5 94 chrX 21358078 intergenic sol +,Sep1 + chrX 21358125 intergenic Sep1 +,sol + chrX 21358172 intergenic Sep1 +,sol + chrX_5_21355001 chrX_21355001 RAL-362_75b 595 chrX 21458696 21458726 chrX 21464131 21464162 Ivk 5 5436 3.0 1.5 2.2 1.6 5466 chrX 21458696 intergenic not near genes chrX 21461429 intergenic not near genes chrX 21464162 intergenic not near genes chrX_5_21460001 chrX_21460001 RAL-362_75b 596 chrX 22752645 22752660 chrX 22752724 22752740 6 80 1.0 0.0 0.5 4.0 95 chrX 22752645 intron CR44997 + chrX 22752692 intron CR44997 + chrX 22752740 intron CR44997 + chrX_6_22750001 chrX_22750001 RAL-362_75b 597 chrX 22771515 22771530 chrX 22774804 22774817 297 4 3289 1.5 1.5 1.5 1.6 3302 chrX 22771515 intron CR44997 + chrX 22773166 intron CR44997 + chrX 22774817 intron CR44997 + chrX_4_22770001 chrX_22770001 RAL-362_75b 598 chrX 22992397 22992409 chrX 22992528 22992540 4 130 0.0 0.5 0.2 3.3 143 chrX 22992397 intron,intron stnA -,stnB - chrX 22992468 intron,intron stnA -,stnB - chrX 22992540 intron,intron stnA -,stnB - chrX_4_22990001 chrX_22990001 RAL-362_75b