SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 39067 39243 297 6582 6968 24 176 '18-6 68.48 11.3 2.0 intron Cda5 - chr2L_24_35001 chr2L_35001 0.75 RAL-361 2 chr2L 313425 313495 jockey 82 13 24 70 '13-11 69.17 17.7 1.3 intron Plc21C + chr2L_24_310001 chr2L_310001 0.54 RAL-361 3 chr2L 505587 505761 297 388 2 55 174 '22-33 65.42 13.6 3.8 intron ush + chr2L_55_505001 chr2L_505001 0.40 RAL-361 4 chr2L 634597 634730 roo 8673 9032 52 133 '33-19 65.03 9.5 5.0 intergenic not near genes chr2L_52_630001 chr2L_630001 0.63 RAL-361 5 chr2L 1097591 1097668 jockey 64 8 33 77 '14-19 67.11 9.0 3.3 intron CG4629 - chr2L_33_1095001 chr2L_1095001 0.42 RAL-361 6 chr2L 1297455 1297616 diver 11 216 60 161 '32-28 61.91 10.7 5.1 intergenic not near genes chr2L_60_1295001 chr2L_1295001 0.53 RAL-361 7 chr2L 1348837 1349000 copia 249 4880 42 163 '23-19 65.28 9.9 3.9 intergenic not near genes chr2L_42_1345001 chr2L_1345001 0.55 RAL-361 8 chr2L 1367042 1367204 297 8 6963 27 162 '21-6 67.65 9.1 2.7 intergenic not near genes chr2L_27_1365001 chr2L_1365001 0.78 RAL-361 9 chr2L 1624046 1624199 hobo 10 2924 38 153 '26-12 65.40 12.2 2.9 3` UTR CR44603 - chr2L_38_1620001 chr2L_1620001 0.68 RAL-361 10 chr2L 2220513 2220674 pogo 2087 9 49 161 '19-30 67.48 14.3 3.2 3` UTR mio + chr2L_49_2220001 chr2L_2220001 0.39 RAL-361 11 chr2L 2283156 2283315 blood 368 13 51 159 '25-26 65.96 7.8 5.8 intergenic not near genes chr2L_51_2280001 chr2L_2280001 0.49 RAL-361 12 chr2L 2320857 2321027 Transpac 5223 4925 55 170 '34-21 65.98 11.5 4.4 intron,intron CG9967 -,eys + chr2L_55_2320001 chr2L_2320001 0.62 RAL-361 13 chr2L 2621578 2621622 BS 5080 5048 21 44 '8-13 60.44 17.5 1.1 intergenic not near genes chr2L_21_2620001 chr2L_2620001 0.38 RAL-361 14 chr2L 2635594 2635761 17.6 7412 8 52 167 '23-29 66.59 11.8 4.1 intergenic not near genes chr2L_52_2635001 chr2L_2635001 0.44 RAL-361 15 chr2L 3374900 3375063 412 12 487 57 163 '32-25 66.21 10.9 4.8 exon CG15412 - chr2L_57_3370001 chr2L_3370001 0.56 RAL-361 16 chr2L 3748932 3749004 jockey 85 12 23 72 '13-10 66.51 12.1 1.8 intron CG10019 + chr2L_23_3745001 chr2L_3745001 0.57 RAL-361 17 chr2L 3927306 3927463 roo 13 398 54 157 '25-29 65.19 12.1 4.1 intron fred - chr2L_54_3925001 chr2L_3925001 0.46 RAL-361 18 chr2L 4009400 4009565 pogo 2088 6 47 165 '28-19 66.04 10.2 4.2 intergenic CG43774 + chr2L_47_4005001 chr2L_4005001 0.60 RAL-361 19 chr2L 4106408 4106486 jockey 8 11 22 78 '9-13 69.27 13.6 1.5 intron ed + chr2L_22_4105001 chr2L_4105001 0.41 RAL-361 20 chr2L 4340825 4340980 I-element 9 5346 67 155 '30-37 64.88 14.0 4.5 intron Atet + chr2L_67_4340001 chr2L_4340001 0.45 RAL-361 21 chr2L 5027388 5027531 P-element 2878 2863 58 143 '35-23 43.47 14.0 3.9 intron vkg - chr2L_58_5025001 chr2L_5025001 0.60 RAL-361 22 chr2L 5443217 5443328 I-element 52 5349 10 111 '4-6 65.11 1.3 4.3 intergenic not near genes chr2L_10_5440001 chr2L_5440001 0.40 RAL-361 23 chr2L 5643590 5643652 jockey 20 83 20 62 '10-10 66.23 13.5 1.4 intron CG31646 - chr2L_20_5640001 chr2L_5640001 0.50 RAL-361 24 chr2L 5656822 5656985 hobo 11 2935 38 163 '17-21 65.74 8.6 4.0 intron CG31646 - chr2L_38_5655001 chr2L_5655001 0.45 RAL-361 25 chr2L 5686873 5686928 I-element 5346 5293 14 55 '3-11 65.97 13.8 0.9 intergenic not near genes chr2L_14_5685001 chr2L_5685001 0.21 RAL-361 26 chr2L 5724255 5724432 1360 3388 3388 26 177 '14-12 58.89 0.2 21.7 intergenic sip1 +,CG11030 + chr2L_26_5720001 chr2L_5720001 0.54 RAL-361 27 chr2L 5790819 5790982 FB 5 8 46 163 '20-26 64.95 8.6 4.8 intron CG9171 - chr2L_46_5790001 chr2L_5790001 0.43 RAL-361 28 chr2L 6014964 6015039 jockey 4834 4759 33 75 '16-17 65.22 13.5 2.3 intron H2.0 - chr2L_33_6010001 chr2L_6010001 0.48 RAL-361 29 chr2L 6135737 6135911 opus 5 7498 43 174 '17-26 65.62 8.1 4.7 intergenic not near genes chr2L_43_6135001 chr2L_6135001 0.40 RAL-361 30 chr2L 6148672 6148843 412 5 488 55 171 '30-25 65.51 5.8 8.1 intergenic not near genes chr2L_55_6145001 chr2L_6145001 0.55 RAL-361 31 chr2L 6265122 6265271 I-element 9 5342 44 149 '26-18 66.10 13.7 3.0 intron Ddr + chr2L_44_6265001 chr2L_6265001 0.59 RAL-361 32 chr2L 6304040 6304089 F-element 22 71 6 49 '3-3 58.67 5.6 0.9 intron Ddr + chr2L_6_6300001 chr2L_6300001 0.50 RAL-361 33 chr2L 6647159 6647313 Juan 4207 4064 53 154 '18-35 63.26 11.9 4.1 intron CG31635 - chr2L_53_6645001 chr2L_6645001 0.34 RAL-361 34 chr2L 6813220 6813401 3S18 5765 341 56 181 '36-20 66.12 8.8 5.7 intergenic CR44081 + chr2L_56_6810001 chr2L_6810001 0.64 RAL-361 35 chr2L 6871335 6871500 pogo 10 33 49 165 '25-24 65.21 9.2 4.8 3` UTR CR44915 - chr2L_49_6870001 chr2L_6870001 0.51 RAL-361 36 chr2L 6874245 6874479 P-element 5 10 108 234 '55-53 46.23 8.7 11.1 5` UTR CR44914 + chr2L_108_6870001 chr2L_6870001 0.51 RAL-361 37 chr2L 7448897 7449030 mdg1 13 7424 31 133 '14-17 63.21 8.5 3.3 5` UTR santa-maria - chr2L_31_7445001 chr2L_7445001 0.45 RAL-361 38 chr2L 7536967 7537129 diver 11 217 60 162 '29-31 63.36 11.6 4.8 intron RapGAP1 - chr2L_60_7535001 chr2L_7535001 0.48 RAL-361 39 chr2L 8151889 8152048 copia 8 242 41 159 '18-23 64.80 11.4 3.3 intron,intron CG8552 -,CG43394 + chr2L_41_8150001 chr2L_8150001 0.44 RAL-361 40 chr2L 8530240 8530415 S-element 5 1712 41 175 '31-10 64.23 11.9 3.2 intron CG17834 + chr2L_41_8530001 chr2L_8530001 0.76 RAL-361 41 chr2L 8656188 8656360 Burdock 6383 6135 37 172 '17-20 65.03 9.9 3.4 intron Sema-1a + chr2L_37_8655001 chr2L_8655001 0.46 RAL-361 42 chr2L 8700083 8700246 pogo 2087 7 60 163 '35-25 65.22 7.0 7.5 intron Hnf4 - chr2L_60_8700001 chr2L_8700001 0.58 RAL-361 43 chr2L 8708106 8708280 pogo 2095 2 46 174 '28-18 66.17 8.1 5.1 intron Hnf4 - chr2L_46_8705001 chr2L_8705001 0.61 RAL-361 44 chr2L 8776782 8776853 G4 3724 3780 11 71 '10-1 65.24 7.2 1.3 intergenic not near genes chr2L_11_8775001 chr2L_8775001 0.91 RAL-361 45 chr2L 8950726 8950883 1360 9 3376 51 157 '30-21 67.45 11.8 4.0 intron C1GalTA - chr2L_51_8950001 chr2L_8950001 0.59 RAL-361 46 chr2L 8959867 8960034 Ivk 5085 5375 44 167 '33-11 60.27 7.9 4.9 3` UTR CG9525 - chr2L_44_8955001 chr2L_8955001 0.75 RAL-361 47 chr2L 8992566 8992746 pogo 1 2096 38 180 '15-23 67.52 11.5 3.0 intron CG9555 + chr2L_38_8990001 chr2L_8990001 0.39 RAL-361 48 chr2L 9010393 9010551 1360 12 9 44 158 '20-24 66.41 13.4 3.1 intergenic CG9568 + chr2L_44_9010001 chr2L_9010001 0.45 RAL-361 49 chr2L 9019510 9019682 P-element 2883 2 67 172 '35-32 48.78 12.9 4.8 intergenic not near genes chr2L_67_9015001 chr2L_9015001 0.52 RAL-361 50 chr2L 9306425 9306592 Burdock 6382 6142 47 167 '6-41 65.66 9.3 4.6 intergenic not near genes chr2L_47_9305001 chr2L_9305001 0.13 RAL-361 51 chr2L 9383550 9383692 copia 4919 242 26 142 '7-19 54.22 3.3 6.0 intron Shawl - chr2L_26_9380001 chr2L_9380001 0.27 RAL-361 52 chr2L 9514004 9514168 roo 402 8664 57 164 '31-26 64.84 9.8 5.3 intron CG33298 + chr2L_57_9510001 chr2L_9510001 0.54 RAL-361 53 chr2L 9600337 9600503 roo 404 9 12 166 '5-7 70.92 15.3 0.7 exon CG4382 - chr2L_12_9600001 chr2L_9600001 0.42 RAL-361 54 chr2L 9886520 9886691 HMS-Beagle 6801 247 32 171 '22-10 63.15 8.0 3.6 intergenic nAChRalpha6 - chr2L_32_9885001 chr2L_9885001 0.69 RAL-361 55 chr2L 10166039 10166126 jockey 4984 4526 32 87 '19-13 65.02 11.4 2.6 intron CG44153 - chr2L_32_10165001 chr2L_10165001 0.59 RAL-361 56 chr2L 10234453 10234622 diver 7 220 70 169 '35-35 66.20 12.6 5.1 intergenic eEF1delta +,mthl15 - chr2L_70_10230001 chr2L_10230001 0.50 RAL-361 57 chr2L 10518821 10518982 opus 12 489 58 161 '33-25 67.24 13.2 4.1 3` UTR Lrr47 + chr2L_58_10515001 chr2L_10515001 0.57 RAL-361 58 chr2L 10779257 10779316 Ivk 5309 5368 21 59 '6-15 66.05 15.5 1.3 intron CG31869 - chr2L_21_10775001 chr2L_10775001 0.29 RAL-361 59 chr2L 11580740 11580876 17.6 6951 7397 25 136 '13-12 65.54 11.0 2.1 intergenic not near genes chr2L_25_11580001 chr2L_11580001 0.52 RAL-361 60 chr2L 11600938 11601102 Quasimodo 7363 14 21 164 '10-11 68.44 11.9 1.6 intron kek2 + chr2L_21_11600001 chr2L_11600001 0.48 RAL-361 61 chr2L 11728555 11728719 copia 10 249 36 164 '23-13 66.49 11.4 2.9 intergenic not near genes chr2L_36_11725001 chr2L_11725001 0.64 RAL-361 62 chr2L 11891171 11891343 diver 5890 218 52 172 '26-26 65.70 10.0 4.7 intron Pde1c - chr2L_52_11890001 chr2L_11890001 0.50 RAL-361 63 chr2L 11930169 11930337 hopper 1406 4 56 168 '18-38 64.41 10.7 4.8 intergenic not near genes chr2L_56_11930001 chr2L_11930001 0.32 RAL-361 64 chr2L 12077596 12077762 roo 9066 9 65 166 '29-36 67.04 11.9 5.0 exon CG14947 + chr2L_65_12075001 chr2L_12075001 0.45 RAL-361 65 chr2L 12247413 12247581 springer 375 5 36 168 '19-17 66.74 8.1 4.0 intron aret + chr2L_36_12245001 chr2L_12245001 0.53 RAL-361 66 chr2L 12479333 12479518 1360 7 3386 19 185 '16-3 62.08 9.9 1.7 intron bun - chr2L_19_12475001 chr2L_12475001 0.84 RAL-361 67 chr2L 12511491 12511655 copia 4878 248 56 164 '26-30 65.68 11.1 4.6 intron bun - chr2L_56_12510001 chr2L_12510001 0.46 RAL-361 68 chr2L 12660988 12661196 pogo 2096 60 55 208 '24-31 59.94 10.5 4.8 intron pdm2 + chr2L_55_12660001 chr2L_12660001 0.44 RAL-361 69 chr2L 12861603 12861731 hobo 2936 42 25 128 '9-16 65.94 7.0 3.1 intergenic not near genes chr2L_25_12860001 chr2L_12860001 0.36 RAL-361 70 chr2L 12959719 12959889 hopper 1405 1414 28 170 '10-18 66.96 11.7 2.2 intergenic not near genes chr2L_28_12955001 chr2L_12955001 0.36 RAL-361 71 chr2L 13054324 13054485 hobo 8 2930 54 161 '24-30 66.68 13.5 3.7 intron CG9932 - chr2L_54_13050001 chr2L_13050001 0.44 RAL-361 72 chr2L 13292894 13292978 X-element 4641 4653 29 84 '10-19 66.49 13.1 2.1 intron CG31729 + chr2L_29_13290001 chr2L_13290001 0.34 RAL-361 73 chr2L 13320880 13320941 jockey 21 32 16 61 '10-6 67.77 20.2 0.8 intron CG43778 - chr2L_16_13320001 chr2L_13320001 0.62 RAL-361 74 chr2L 13324527 13324595 jockey 4723 4791 28 68 '11-17 66.10 11.8 2.2 intron CG43778 - chr2L_28_13320001 chr2L_13320001 0.39 RAL-361 75 chr2L 13554672 13554802 FB 14 34 36 130 '18-18 63.55 10.9 3.0 intron kuz + chr2L_36_13550001 chr2L_13550001 0.50 RAL-361 76 chr2L 13836460 13836639 blood 7014 373 35 179 '25-10 70.42 4.3 6.6 intron CenG1A + chr2L_35_13835001 chr2L_13835001 0.71 RAL-361 77 chr2L 14141236 14141392 hopper 1399 9 46 156 '17-29 65.91 11.6 3.7 intron CG17341 + chr2L_46_14140001 chr2L_14140001 0.37 RAL-361 78 chr2L 14476199 14476354 pogo 2091 19 57 155 '34-23 64.51 14.5 3.7 intergenic not near genes chr2L_57_14475001 chr2L_14475001 0.60 RAL-361 79 chr2L 14830596 14830661 jockey 4988 4924 22 65 '9-13 63.86 11.9 1.7 intergenic not near genes chr2L_22_14830001 chr2L_14830001 0.41 RAL-361 80 chr2L 14857335 14857574 blood 48 377 39 239 '11-28 68.98 6.6 5.1 intergenic not near genes chr2L_39_14855001 chr2L_14855001 0.28 RAL-361 81 chr2L 14997629 14997820 pogo 3 2099 42 191 '22-20 60.04 9.9 3.9 intergenic mol - chr2L_42_14995001 chr2L_14995001 0.52 RAL-361 82 chr2L 15228720 15228886 mdg1 9 415 31 166 '10-21 65.15 8.9 3.1 intergenic ZnT35C - chr2L_31_15225001 chr2L_15225001 0.32 RAL-361 83 chr2L 15830915 15831073 hobo 10 2929 60 158 '27-33 64.31 9.5 5.7 intergenic not near genes chr2L_60_15830001 chr2L_15830001 0.45 RAL-361 84 chr2L 15864232 15864365 hobo 13 2924 33 133 '23-10 64.24 9.3 3.2 intergenic not near genes chr2L_33_15860001 chr2L_15860001 0.70 RAL-361 85 chr2L 16126192 16126249 Doc 74 17 19 57 '7-12 62.26 10.3 1.7 intergenic not near genes chr2L_19_16125001 chr2L_16125001 0.37 RAL-361 86 chr2L 16227075 16227247 1360 3 3385 67 172 '27-40 67.70 13.2 4.7 intergenic not near genes chr2L_67_16225001 chr2L_16225001 0.40 RAL-361 87 chr2L 16492970 16493141 1360 5 3386 35 171 '20-15 60.53 10.4 3.1 intron Tpr2 + chr2L_35_16490001 chr2L_16490001 0.57 RAL-361 88 chr2L 16547217 16547288 Doc 4 74 35 71 '15-20 63.75 6.1 4.9 intron CG42389 + chr2L_35_16545001 chr2L_16545001 0.43 RAL-361 89 chr2L 16886364 16886424 Quasimodo 7304 7363 10 60 '5-5 69.44 4.2 1.9 intergenic CG31743 +,CG34313 + chr2L_10_16885001 chr2L_16885001 0.50 RAL-361 90 chr2L 16886383 16886566 Tirant 3 401 42 183 '21-21 64.32 6.1 5.9 intergenic CG31743 +,CG34313 + chr2L_42_16885001 chr2L_16885001 0.50 RAL-361 91 chr2L 17047036 17047213 hopper 1413 1414 39 177 '14-25 61.71 8.9 3.9 intergenic CG15136 - chr2L_39_17045001 chr2L_17045001 0.36 RAL-361 92 chr2L 17097127 17097353 opus 7115 494 31 226 '8-23 64.28 5.5 4.8 intergenic not near genes chr2L_31_17095001 chr2L_17095001 0.26 RAL-361 93 chr2L 17233433 17233605 roo 412 8681 20 172 '15-5 58.14 0.0 20.0 intron beat-IIIc - chr2L_20_17230001 chr2L_17230001 0.75 RAL-361 94 chr2L 17379290 17379467 opus 499 2 35 177 '26-9 67.15 10.8 3.0 intron Lrch - chr2L_35_17375001 chr2L_17375001 0.74 RAL-361 95 chr2L 17768722 17768776 Doc 418 472 10 54 '5-5 66.13 12.7 0.7 intron CadN - chr2L_10_17765001 chr2L_17765001 0.50 RAL-361 96 chr2L 17920711 17920871 hobo 2930 17 36 160 '23-13 63.47 9.3 3.5 intergenic not near genes chr2L_36_17920001 chr2L_17920001 0.64 RAL-361 97 chr2L 18177012 18177065 INE-1 549 134 11 53 '10-1 73.04 14.1 0.7 intron CG42750 - chr2L_11_18175001 chr2L_18175001 0.91 RAL-361 98 chr2L 18624835 18624999 roo 403 11 5 164 '2-3 63.84 15.1 0.3 intron MESR3 + chr2L_5_18620001 chr2L_18620001 0.40 RAL-361 99 chr2L 19013116 19013282 copia 247 6 53 166 '26-27 62.79 9.9 4.9 intergenic not near genes chr2L_53_19010001 chr2L_19010001 0.49 RAL-361 100 chr2L 19364048 19364157 BS 4778 5061 7 109 '5-2 51.30 0.0 7.0 intergenic CG13086 + chr2L_7_19360001 chr2L_19360001 0.71 RAL-361 101 chr2L 19679818 19679989 412 487 4 52 171 '31-21 65.26 10.6 4.5 intron Lar + chr2L_52_19675001 chr2L_19675001 0.60 RAL-361 102 chr2L 19730176 19730343 pogo 2092 8 56 167 '20-36 66.62 10.8 4.7 3` UTR Lar + chr2L_56_19730001 chr2L_19730001 0.36 RAL-361 103 chr2L 19740823 19740875 Tc3 240 311 4 52 '1-3 72.60 9.3 0.4 intergenic not near genes chr2L_4_19740001 chr2L_19740001 0.25 RAL-361 104 chr2L 19817771 19817821 G4 3833 3781 11 50 '2-9 55.64 1.7 4.1 intron sick + chr2L_11_19815001 chr2L_19815001 0.18 RAL-361 105 chr2L 20087354 20087404 Doc 75 25 30 50 '15-15 63.03 4.5 5.5 intron neb + chr2L_30_20085001 chr2L_20085001 0.50 RAL-361 106 chr2L 20244861 20245039 HMS-Beagle2 7194 6886 61 178 '22-39 64.10 10.4 5.4 intergenic not near genes chr2L_61_20240001 chr2L_20240001 0.36 RAL-361 107 chr2L 20263513 20263560 Juan 4142 4189 20 47 '9-11 63.29 12.5 1.5 3` UTR CG17570 - chr2L_20_20260001 chr2L_20260001 0.45 RAL-361 108 chr2L 20511561 20511737 mdg1 7041 419 39 176 '27-12 65.38 8.0 4.3 intergenic not near genes chr2L_39_20510001 chr2L_20510001 0.69 RAL-361 109 chr2L 20708444 20708491 Doc 50 3 13 47 '5-8 51.82 4.6 2.3 intron Hr38 - chr2L_13_20705001 chr2L_20705001 0.38 RAL-361 110 chr2L 20719654 20719815 opus 11 488 50 161 '18-32 66.11 12.0 3.8 intergenic not near genes chr2L_50_20715001 chr2L_20715001 0.36 RAL-361 111 chr2L 20855917 20856083 412 8 7541 49 166 '20-29 64.02 11.2 4.0 intron twit + chr2L_49_20855001 chr2L_20855001 0.41 RAL-361 112 chr2L 20939475 20939640 hopper 9 1408 35 165 '15-20 62.77 9.7 3.3 intergenic not near genes chr2L_35_20935001 chr2L_20935001 0.43 RAL-361 113 chr2L 21031918 21032060 297 6588 6940 33 142 '32-1 65.63 11.1 2.7 intron CG42238 - chr2L_33_21030001 chr2L_21030001 0.97 RAL-361 114 chr2L 21039004 21039170 Transpac 13 5226 52 166 '22-30 66.26 11.5 4.2 intron CG42238 - chr2L_52_21035001 chr2L_21035001 0.42 RAL-361 115 chr2L 21201179 21201272 412 69 7527 20 93 '6-14 65.18 9.7 1.9 intergenic CG31988 - chr2L_20_21200001 chr2L_21200001 0.30 RAL-361 116 chr2L 21325085 21325130 invader4 3052 3028 17 45 '7-10 73.79 22.8 0.7 intergenic not near genes chr2L_17_21325001 chr2L_21325001 0.41 RAL-361 117 chr2L 21343868 21344033 297 6969 11 52 165 '35-17 70.04 11.7 4.1 intergenic not near genes chr2L_52_21340001 chr2L_21340001 0.67 RAL-361 118 chr2L 21357797 21357952 gtwin 457 9 46 155 '29-17 62.91 9.3 4.5 3` UTR Tsp39D + chr2L_46_21355001 chr2L_21355001 0.63 RAL-361 119 chr2L 21400696 21400815 Doc3-element 32 4695 4 119 '1-3 38.20 17.1 0.2 intergenic not near genes chr2L_4_21400001 chr2L_21400001 0.25 RAL-361 120 chr2L 21403523 21403588 G5 4437 4391 15 65 '9-6 61.38 10.5 1.3 intergenic not near genes chr2L_15_21400001 chr2L_21400001 0.60 RAL-361 121 chr2L 21570235 21570291 Dm88 70 4375 22 56 '10-12 65.47 9.8 2.0 intergenic not near genes chr2L_22_21570001 chr2L_21570001 0.45 RAL-361 122 chr2L 21734962 21735022 17.6 6 66 16 60 '8-8 67.03 9.3 1.6 intergenic not near genes chr2L_16_21730001 chr2L_21730001 0.50 RAL-361 123 chr2L 21882116 21882186 roo 335 406 27 70 '15-12 66.56 13.2 1.9 intergenic not near genes chr2L_27_21880001 chr2L_21880001 0.56 RAL-361 124 chr2L 22362058 22362237 pogo 3 2100 40 179 '25-15 64.84 8.3 4.3 intron CG17018 + chr2L_40_22360001 chr2L_22360001 0.62 RAL-361 125 chr2L 22445984 22446028 Doc 64 19 10 44 '4-6 67.18 19.8 0.5 intergenic not near genes chr2L_10_22445001 chr2L_22445001 0.40 RAL-361 126 chr2L 22776365 22776433 3S18 335 6032 18 68 '9-9 69.37 13.5 1.2 intergenic not near genes chr2L_18_22775001 chr2L_22775001 0.50 RAL-361 127 chr2L 22778208 22778259 3S18 5833 17 17 51 '10-7 57.61 8.4 1.8 intergenic not near genes chr2L_17_22775001 chr2L_22775001 0.59 RAL-361 128 chr2L 23034036 23034100 FB 361 927 25 64 '13-12 52.90 14.1 1.7 intergenic not near genes chr2L_25_23030001 chr2L_23030001 0.52 RAL-361 129 chr2L 23068814 23068978 1360 3376 3387 55 164 '25-30 67.03 9.1 5.4 intergenic CR43242 +,Spf45 - chr2L_55_23065001 chr2L_23065001 0.45 RAL-361 130 chr2L 23167468 23167635 roo 8669 9063 68 167 '32-36 66.21 10.7 5.8 intron CG12567 - chr2L_68_23165001 chr2L_23165001 0.47 RAL-361 131 chr2L 23295815 23295917 micropia 5363 1 33 102 '12-21 66.50 8.8 3.4 intergenic not near genes chr2L_33_23295001 chr2L_23295001 0.36 RAL-361 132 chr2R 544751 544917 HMS-Beagle 6804 7034 35 166 '17-18 64.72 8.7 3.6 intron CG40378 + chr2R_35_540001 chr2R_540001 0.49 RAL-361 133 chr2R 611439 611559 412 7514 28 16 120 '11-5 61.34 4.9 2.7 intron CG40378 + chr2R_16_610001 chr2R_610001 0.69 RAL-361 134 chr2R 675581 675645 F-element 21 85 11 64 '4-7 68.79 5.5 1.7 intron CG43676 + chr2R_11_675001 chr2R_675001 0.36 RAL-361 135 chr2R 969097 969228 mdg1 6 378 12 131 '5-7 70.40 9.1 1.2 intergenic not near genes chr2R_12_965001 chr2R_965001 0.42 RAL-361 136 chr2R 1516552 1516602 Transpac 8 4977 18 50 '6-12 62.64 64.7 0.3 exon Maf1 - chr2R_18_1515001 chr2R_1515001 0.33 RAL-361 137 chr2R 2125046 2125091 roo 28 8737 19 45 '12-7 63.13 9.6 1.8 intron CG17684 - chr2R_19_2125001 chr2R_2125001 0.63 RAL-361 138 chr2R 2666291 2666334 Rt1a 9 52 11 43 '7-4 62.55 21.2 0.5 intergenic not near genes chr2R_11_2665001 chr2R_2665001 0.64 RAL-361 139 chr2R 3558253 3558314 F-element 15 76 16 61 '8-8 65.37 8.0 1.8 intergenic not near genes chr2R_16_3555001 chr2R_3555001 0.50 RAL-361 140 chr2R 4012220 4012382 roo 400 8674 55 162 '24-31 66.58 12.8 4.0 intergenic not near genes chr2R_55_4010001 chr2R_4010001 0.44 RAL-361 141 chr2R 4511903 4511966 transib2 62 126 18 63 '7-11 70.00 13.4 1.2 intergenic not near genes chr2R_18_4510001 chr2R_4510001 0.39 RAL-361 142 chr2R 4559005 4559178 pogo 2 2092 47 173 '19-28 67.40 9.2 4.6 intron Stlk + chr2R_47_4555001 chr2R_4555001 0.40 RAL-361 143 chr2R 4582427 4582645 1360 70 2923 4 218 '1-3 61.80 10.4 0.4 intergenic not near genes chr2R_4_4580001 chr2R_4580001 0.25 RAL-361 144 chr2R 4673527 4673589 Quasimodo 7364 7302 11 62 '6-5 70.03 14.1 0.7 3` UTR CG17883 + chr2R_11_4670001 chr2R_4670001 0.55 RAL-361 145 chr2R 4731228 4731288 F-element 75 25 15 60 '11-4 59.30 6.9 1.9 5` UTR CR45471 + chr2R_15_4730001 chr2R_4730001 0.73 RAL-361 146 chr2R 5064787 5064836 Stalker3T 205 202 381 49 '1-380 62.41 22.9 15.9 intergenic TpnC41C - chr2R_381_5060001 chr2R_5060001 0.00 RAL-361 147 chr2R 5173088 5173256 Stalker4 6965 405 17 168 '1-16 66.46 7.3 2.0 intergenic not near genes chr2R_17_5170001 chr2R_5170001 0.06 RAL-361 148 chr2R 5173090 5173229 Stalker 6860 7227 10 139 '1-9 64.93 7.7 1.1 intergenic not near genes chr2R_10_5170001 chr2R_5170001 0.10 RAL-361 149 chr2R 5674607 5674759 S-element 1706 1690 27 152 '15-12 67.17 10.3 2.4 intergenic not near genes chr2R_27_5670001 chr2R_5670001 0.56 RAL-361 150 chr2R 5707263 5707430 pogo 2092 8 55 167 '28-27 65.32 10.7 4.7 3` UTR ap - chr2R_55_5705001 chr2R_5705001 0.51 RAL-361 151 chr2R 5978944 5979003 F-element 27 86 25 59 '9-16 66.41 18.3 1.3 intron mle - chr2R_25_5975001 chr2R_5975001 0.36 RAL-361 152 chr2R 6041515 6041805 flea 9 257 32 290 '25-7 67.66 13.3 2.2 intergenic not near genes chr2R_32_6040001 chr2R_6040001 0.78 RAL-361 153 chr2R 6438301 6438359 Stalker4 400 342 7 58 '3-4 68.34 24.4 0.3 intergenic not near genes chr2R_7_6435001 chr2R_6435001 0.43 RAL-361 154 chr2R 6564969 6565135 blood 6 7380 46 166 '21-25 64.43 9.5 4.4 intron jing + chr2R_46_6560001 chr2R_6560001 0.46 RAL-361 155 chr2R 6757276 6757433 P-element 10 2882 64 157 '31-33 46.05 13.3 4.5 intergenic CG3420 -,CG9436 - chr2R_64_6755001 chr2R_6755001 0.48 RAL-361 156 chr2R 6779723 6779890 17.6 7411 7 50 167 '21-29 66.87 15.4 3.0 intron Epac - chr2R_50_6775001 chr2R_6775001 0.42 RAL-361 157 chr2R 7039932 7040236 P-element 2880 8 80 304 '45-35 45.27 9.0 8.0 intergenic Tsp42Ej + chr2R_80_7035001 chr2R_7035001 0.56 RAL-361 158 chr2R 7048661 7048824 297 384 6590 47 163 '20-27 63.36 13.4 3.3 intergenic Tsp42El + chr2R_47_7045001 chr2R_7045001 0.43 RAL-361 159 chr2R 7142852 7143007 X-element 11 4709 51 155 '35-16 66.52 12.1 3.9 intergenic not near genes chr2R_51_7140001 chr2R_7140001 0.69 RAL-361 160 chr2R 7188638 7188796 I-element 5346 4 47 158 '15-32 64.94 13.1 3.3 intron pk + chr2R_47_7185001 chr2R_7185001 0.32 RAL-361 161 chr2R 7254319 7254503 flea 249 4764 49 184 '30-19 65.33 10.7 4.2 intergenic CR45280 + chr2R_49_7250001 chr2R_7250001 0.61 RAL-361 162 chr2R 7940801 7940966 roo 8664 393 46 165 '23-23 67.91 9.8 4.3 intron CG30379 + chr2R_46_7940001 chr2R_7940001 0.50 RAL-361 163 chr2R 8326239 8326396 hobo 2930 12 41 157 '18-23 64.73 10.7 3.5 intergenic not near genes chr2R_41_8325001 chr2R_8325001 0.44 RAL-361 164 chr2R 8378551 8378718 pogo 2090 6 53 167 '28-25 66.07 15.1 3.3 intron pdm3 + chr2R_53_8375001 chr2R_8375001 0.53 RAL-361 165 chr2R 8559975 8560125 17.6 7362 435 33 150 '1-32 64.20 11.4 2.7 intergenic not near genes chr2R_33_8555001 chr2R_8555001 0.03 RAL-361 166 chr2R 8642858 8643019 Doc2-element 4760 4691 65 161 '34-31 63.74 12.8 4.7 intergenic not near genes chr2R_65_8640001 chr2R_8640001 0.52 RAL-361 167 chr2R 9344053 9344218 roo 8673 402 37 165 '21-16 68.56 12.1 2.8 intron,intron CG13739 -,CG13954 - chr2R_37_9340001 chr2R_9340001 0.57 RAL-361 168 chr2R 9374764 9374936 Tirant 8114 8501 59 172 '28-31 67.25 13.1 4.2 intron CG13954 - chr2R_59_9370001 chr2R_9370001 0.47 RAL-361 169 chr2R 9375269 9375438 412 11 492 52 169 '31-21 68.99 13.7 3.5 intron CG13954 - chr2R_52_9375001 chr2R_9375001 0.60 RAL-361 170 chr2R 9870886 9871064 roo 410 8669 63 178 '31-32 67.26 7.3 7.6 intron cbx - chr2R_63_9870001 chr2R_9870001 0.49 RAL-361 171 chr2R 9945391 9945629 jockey 4764 4844 32 238 '31-1 65.56 6.6 4.2 intron Mef2 - chr2R_32_9945001 chr2R_9945001 0.97 RAL-361 172 chr2R 10202614 10202774 opus 489 13 46 160 '27-19 64.09 8.5 4.8 intergenic not near genes chr2R_46_10200001 chr2R_10200001 0.59 RAL-361 173 chr2R 10440881 10441041 mdg1 7456 18 44 160 '32-12 65.10 7.8 5.0 intron Galphao + chr2R_44_10440001 chr2R_10440001 0.73 RAL-361 174 chr2R 10585240 10585411 hopper 4 6 60 171 '34-26 64.95 11.2 4.9 intron psq + chr2R_60_10585001 chr2R_10585001 0.57 RAL-361 175 chr2R 11534703 11534967 gypsy9 5308 5309 4 264 '1-3 47.99 2.8 1.1 intergenic not near genes chr2R_4_11530001 chr2R_11530001 0.25 RAL-361 176 chr2R 11995621 11995784 roo 9061 7 47 163 '27-20 67.07 13.0 3.4 3` UTR,5` UTR CR45319 -,CR45318 + chr2R_47_11995001 chr2R_11995001 0.57 RAL-361 177 chr2R 12185286 12185450 accord 7374 8 29 164 '17-12 64.81 11.8 2.3 3` UTR,exon CG13175 +,CG33964 + chr2R_29_12185001 chr2R_12185001 0.59 RAL-361 178 chr2R 12253297 12253342 BS 4708 4662 11 45 '6-5 61.28 0.0 11.0 intergenic not near genes chr2R_11_12250001 chr2R_12250001 0.55 RAL-361 179 chr2R 12419504 12419576 jockey 4916 4988 27 72 '13-14 65.72 18.4 1.4 intergenic CG42782 -,CG8834 - chr2R_27_12415001 chr2R_12415001 0.48 RAL-361 180 chr2R 12498028 12498193 roo 10 402 57 165 '27-30 67.44 8.8 5.8 intron,intron fdl -,s-cup + chr2R_57_12495001 chr2R_12495001 0.47 RAL-361 181 chr2R 12780272 12780650 P-element 1 96 52 378 '38-14 51.98 7.4 6.2 intergenic sca + chr2R_52_12780001 chr2R_12780001 0.73 RAL-361 182 chr2R 12818653 12818881 mdg1 7039 373 45 228 '23-22 63.08 9.3 4.4 intergenic not near genes chr2R_45_12815001 chr2R_12815001 0.51 RAL-361 183 chr2R 13043388 13043565 Max-element 5 303 51 177 '24-27 65.92 7.1 6.3 intergenic not near genes chr2R_51_13040001 chr2R_13040001 0.47 RAL-361 184 chr2R 13054101 13054272 Burdock 249 5 49 171 '16-33 67.64 8.6 5.1 intergenic not near genes chr2R_49_13050001 chr2R_13050001 0.33 RAL-361 185 chr2R 13092791 13092952 opus 492 12 36 161 '23-13 64.54 11.0 3.0 intergenic not near genes chr2R_36_13090001 chr2R_13090001 0.64 RAL-361 186 chr2R 13345444 13345622 Max-element 8238 302 55 178 '26-29 64.68 9.7 5.1 intron CR44206 - chr2R_55_13345001 chr2R_13345001 0.47 RAL-361 187 chr2R 13474891 13475063 G2 3071 3073 7 172 '6-1 70.82 8.2 0.8 intron arr - chr2R_7_13470001 chr2R_13470001 0.86 RAL-361 188 chr2R 13580454 13580500 jockey 18 69 15 46 '8-7 63.73 17.8 0.8 3` UTR CG6191 - chr2R_15_13580001 chr2R_13580001 0.53 RAL-361 189 chr2R 13580843 13580905 jockey 4926 4988 23 62 '14-9 59.73 7.6 2.7 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_23_13580001 chr2R_13580001 0.61 RAL-361 190 chr2R 13585408 13585585 Juan 4031 4140 62 177 '35-27 65.78 11.6 4.9 intron,intron CG6191 -,CG45088 - chr2R_62_13585001 chr2R_13585001 0.56 RAL-361 191 chr2R 13672419 13672473 I-element 5340 5286 17 54 '7-10 63.50 17.5 0.9 intron fas + chr2R_17_13670001 chr2R_13670001 0.41 RAL-361 192 chr2R 13701950 13702104 mdg3 5267 234 45 154 '22-23 64.95 10.3 4.0 intron fas + chr2R_45_13700001 chr2R_13700001 0.49 RAL-361 193 chr2R 14444091 14444222 Tirant 8114 8460 40 131 '23-17 68.47 6.0 5.7 intron Oaz + chr2R_40_14440001 chr2R_14440001 0.57 RAL-361 194 chr2R 14483405 14483579 S-element 1707 2 27 174 '12-15 68.25 10.5 2.3 intron L + chr2R_27_14480001 chr2R_14480001 0.44 RAL-361 195 chr2R 14578467 14578646 copia 255 4871 40 179 '18-22 66.85 8.3 4.3 intron ttv + chr2R_40_14575001 chr2R_14575001 0.45 RAL-361 196 chr2R 14940763 14940916 Bari1 1697 13 6 153 '5-1 68.80 10.1 0.5 intergenic Lap1 + chr2R_6_14940001 chr2R_14940001 0.83 RAL-361 197 chr2R 14999374 14999532 hobo 2933 14 39 158 '23-16 62.25 11.2 3.2 intergenic not near genes chr2R_39_14995001 chr2R_14995001 0.59 RAL-361 198 chr2R 15110881 15111047 roo 8670 400 49 166 '19-30 65.60 5.7 7.3 intergenic not near genes chr2R_49_15110001 chr2R_15110001 0.39 RAL-361 199 chr2R 15288594 15288776 Transpac 5228 4918 60 182 '35-25 63.58 9.4 5.8 intron Trpm - chr2R_60_15285001 chr2R_15285001 0.58 RAL-361 200 chr2R 15351748 15351893 hobo 28 2934 41 145 '14-27 64.76 9.4 3.9 intron unc-5 + chr2R_41_15350001 chr2R_15350001 0.34 RAL-361 201 chr2R 15891393 15891459 Doc 70 4 32 66 '16-16 61.40 13.2 2.3 intron sli - chr2R_32_15890001 chr2R_15890001 0.50 RAL-361 202 chr2R 16019835 16019994 roo 394 7 43 159 '23-20 62.21 13.0 3.1 intron CG8399 + chr2R_43_16015001 chr2R_16015001 0.53 RAL-361 203 chr2R 16162042 16162109 1360 72 3384 33 67 '21-12 67.68 12.5 2.4 intron lbk + chr2R_33_16160001 chr2R_16160001 0.64 RAL-361 204 chr2R 16516776 16516948 S-element 1 7 35 172 '12-23 67.19 9.7 3.3 intron Sema-2a + chr2R_35_16515001 chr2R_16515001 0.34 RAL-361 205 chr2R 16548575 16548650 F-element 12 76 25 75 '11-14 66.00 12.5 1.9 intergenic not near genes chr2R_25_16545001 chr2R_16545001 0.44 RAL-361 206 chr2R 16572555 16572722 roo 8674 405 55 167 '26-29 69.31 12.5 4.1 exon CG4927 + chr2R_55_16570001 chr2R_16570001 0.47 RAL-361 207 chr2R 16983423 16983498 jockey 4668 4742 24 75 '4-20 64.02 13.3 1.7 intron Cbp53E + chr2R_24_16980001 chr2R_16980001 0.17 RAL-361 208 chr2R 17446027 17446139 blood 7323 7014 41 112 '12-29 69.54 8.9 4.1 exon mthl4 - chr2R_41_17445001 chr2R_17445001 0.29 RAL-361 209 chr2R 17718282 17718449 McClintock 5961 6425 54 167 '27-27 66.51 12.9 3.9 intron CG6424 - chr2R_54_17715001 chr2R_17715001 0.50 RAL-361 210 chr2R 18326267 18326431 297 1 6963 42 164 '28-14 64.52 11.0 3.5 intron sbb - chr2R_42_18325001 chr2R_18325001 0.67 RAL-361 211 chr2R 18503217 18503431 copia 4869 249 34 214 '16-18 66.61 9.6 3.2 intergenic GstE11 + chr2R_34_18500001 chr2R_18500001 0.47 RAL-361 212 chr2R 18652851 18653013 P-element 2882 6 46 162 '19-27 46.57 10.7 3.9 intron SP2637 - chr2R_46_18650001 chr2R_18650001 0.41 RAL-361 213 chr2R 18654198 18654333 P-element 2853 11 29 135 '4-25 44.81 13.0 2.1 intron SP2637 - chr2R_29_18650001 chr2R_18650001 0.14 RAL-361 214 chr2R 18757080 18757257 412 4 492 67 177 '32-35 67.40 12.9 4.8 3` UTR,3` UTR Cyp12b2 +,Jabba - chr2R_67_18755001 chr2R_18755001 0.48 RAL-361 215 chr2R 18807888 18807952 BS 5030 5030 19 64 '12-7 62.21 4.6 3.4 intergenic CG15096 - chr2R_19_18805001 chr2R_18805001 0.63 RAL-361 216 chr2R 19096864 19097021 Quasimodo 7361 19 23 157 '13-10 67.19 10.3 2.0 intron 5-HT1A + chr2R_23_19095001 chr2R_19095001 0.57 RAL-361 217 chr2R 19166574 19166734 FB 5 12 55 160 '28-27 68.77 12.8 4.0 intron CG10737 + chr2R_55_19165001 chr2R_19165001 0.51 RAL-361 218 chr2R 19206575 19206728 I-element 5347 11 54 153 '20-34 64.44 11.9 4.2 intron hppy + chr2R_54_19205001 chr2R_19205001 0.37 RAL-361 219 chr2R 19648067 19648231 roo 402 8674 44 164 '12-32 69.42 11.8 3.4 intergenic CG15905 - chr2R_44_19645001 chr2R_19645001 0.27 RAL-361 220 chr2R 19789025 19789194 412 10 7538 25 169 '13-12 64.18 3.9 5.1 5` UTR CR45231 + chr2R_25_19785001 chr2R_19785001 0.52 RAL-361 221 chr2R 20044064 20044225 roo 400 11 70 161 '35-35 66.89 11.1 5.8 intergenic not near genes chr2R_70_20040001 chr2R_20040001 0.50 RAL-361 222 chr2R 20151957 20152136 Transpac 5228 4921 55 179 '29-26 68.45 10.9 4.6 intergenic not near genes chr2R_55_20150001 chr2R_20150001 0.53 RAL-361 223 chr2R 20188521 20188658 mdg1 7041 382 34 137 '25-9 66.76 7.5 4.0 intergenic not near genes chr2R_34_20185001 chr2R_20185001 0.74 RAL-361 224 chr2R 20338798 20338964 Tabor 3 475 36 166 '27-9 62.03 6.9 4.6 intergenic not near genes chr2R_36_20335001 chr2R_20335001 0.75 RAL-361 225 chr2R 20353799 20353966 Stalker4 411 8 37 167 '22-15 60.55 10.4 3.2 intergenic CG11192 - chr2R_37_20350001 chr2R_20350001 0.59 RAL-361 226 chr2R 20353854 20353964 Stalker 7198 10 19 110 '7-12 62.61 10.5 1.7 intergenic CG11192 - chr2R_19_20350001 chr2R_20350001 0.37 RAL-361 227 chr2R 20523562 20523631 I-element 5306 5349 23 69 '9-14 65.09 11.1 1.9 intergenic not near genes chr2R_23_20520001 chr2R_20520001 0.39 RAL-361 228 chr2R 21370700 21370966 3S18 9 310 40 266 '34-6 62.49 5.8 5.9 intron cv-2 - chr2R_40_21370001 chr2R_21370001 0.85 RAL-361 229 chr2R 22165524 22165683 roo 8675 399 50 159 '23-27 67.19 11.4 4.0 intron a + chr2R_50_22165001 chr2R_22165001 0.46 RAL-361 230 chr2R 22444491 22444632 hopper 2 1377 48 141 '29-19 65.92 10.5 4.2 intergenic not near genes chr2R_48_22440001 chr2R_22440001 0.60 RAL-361 231 chr2R 22621202 22621371 hobo 6 2937 45 169 '19-26 64.19 11.2 3.7 intron CG33143 + chr2R_45_22620001 chr2R_22620001 0.42 RAL-361 232 chr2R 22791662 22791735 jockey 4678 4703 37 73 '18-19 65.16 13.3 2.6 intron CG42260 - chr2R_37_22790001 chr2R_22790001 0.49 RAL-361 233 chr2R 23329252 23329419 17.6 7 7412 55 167 '40-15 64.99 11.8 4.3 intergenic CG30413 - chr2R_55_23325001 chr2R_23325001 0.73 RAL-361 234 chr2R 24294720 24294881 412 480 7 59 161 '34-25 63.19 10.6 5.1 intron CG3394 + chr2R_59_24290001 chr2R_24290001 0.58 RAL-361 235 chr2R 24299353 24299428 jockey 4758 4799 25 75 '11-14 66.19 12.5 1.9 intergenic not near genes chr2R_25_24295001 chr2R_24295001 0.44 RAL-361 236 chr2R 24804187 24804349 17.6 10 7409 43 162 '19-24 64.27 12.2 3.3 intergenic not near genes chr2R_43_24800001 chr2R_24800001 0.44 RAL-361 237 chr3L 24923 25070 I-element 4986 5345 38 147 '5-33 65.43 16.0 2.2 intron mthl8 + chr3L_38_20001 chr3L_20001 0.13 RAL-361 238 chr3L 46878 47045 FB 9 1 42 167 '20-22 66.28 8.3 4.5 intergenic not near genes chr3L_42_45001 chr3L_45001 0.48 RAL-361 239 chr3L 145978 146380 Juan 4147 277 41 402 '10-31 62.00 13.1 2.9 intergenic Pdk1 +,CG6845 + chr3L_41_145001 chr3L_145001 0.24 RAL-361 240 chr3L 274147 274326 Tirant 8111 8505 48 179 '20-28 66.60 10.6 4.1 exon miple2 + chr3L_48_270001 chr3L_270001 0.42 RAL-361 241 chr3L 559910 560034 297 346 6590 21 124 '5-16 68.03 5.8 3.1 intron hipk + chr3L_21_555001 chr3L_555001 0.24 RAL-361 242 chr3L 715327 715497 mdg3 5495 5260 53 170 '29-24 65.36 11.1 4.4 intergenic not near genes chr3L_53_715001 chr3L_715001 0.55 RAL-361 243 chr3L 762855 763028 Transpac 4924 5225 64 173 '34-30 68.74 11.9 5.0 intergenic not near genes chr3L_64_760001 chr3L_760001 0.53 RAL-361 244 chr3L 867289 867460 S-element 5 1708 50 171 '33-17 67.09 12.2 3.8 intron CG12502 + chr3L_50_865001 chr3L_865001 0.66 RAL-361 245 chr3L 922683 922854 412 494 5 51 171 '25-26 64.83 9.3 5.0 intron Glut1 + chr3L_51_920001 chr3L_920001 0.49 RAL-361 246 chr3L 1214042 1214207 roo 397 8661 54 165 '21-33 60.40 11.7 4.3 intron mwh + chr3L_54_1210001 chr3L_1210001 0.39 RAL-361 247 chr3L 2009347 2009415 jockey 10 18 25 68 '15-10 68.85 13.5 1.7 3` UTR CR44535 - chr3L_25_2005001 chr3L_2005001 0.60 RAL-361 248 chr3L 2033718 2033857 297 9 6967 29 139 '13-16 70.73 11.4 2.3 intergenic not near genes chr3L_29_2030001 chr3L_2030001 0.45 RAL-361 249 chr3L 2137039 2137206 Transpac 4933 5228 41 167 '29-12 63.39 8.7 4.2 intron zormin - chr3L_41_2135001 chr3L_2135001 0.71 RAL-361 250 chr3L 2797400 2797546 roo 9053 17 4 146 '2-2 68.34 19.4 0.2 intron CG43444 - chr3L_4_2795001 chr3L_2795001 0.50 RAL-361 251 chr3L 2807877 2808032 I-element 5347 4 34 155 '9-25 62.46 6.0 4.9 intron CG43444 - chr3L_34_2805001 chr3L_2805001 0.26 RAL-361 252 chr3L 3484776 3484948 Transpac 4923 303 46 172 '19-27 66.90 10.4 4.0 intron CG42324 + chr3L_46_3480001 chr3L_3480001 0.41 RAL-361 253 chr3L 3598894 3599066 Tabor 478 6 60 172 '33-27 63.22 11.0 5.0 intron Eip63E + chr3L_60_3595001 chr3L_3595001 0.55 RAL-361 254 chr3L 3599297 3599370 F-element 38 15 29 73 '10-19 64.82 5.2 4.7 intron Eip63E + chr3L_29_3595001 chr3L_3595001 0.34 RAL-361 255 chr3L 3944653 3944710 jockey 4745 4688 25 57 '10-15 60.56 3.8 5.2 intron CG14982 + chr3L_25_3940001 chr3L_3940001 0.40 RAL-361 256 chr3L 4269884 4270050 HMS-Beagle2 300 6887 50 166 '26-24 65.39 8.3 5.4 intron CG1273 + chr3L_50_4265001 chr3L_4265001 0.52 RAL-361 257 chr3L 4448644 4448810 blood 10 7384 50 166 '32-18 62.54 11.4 4.0 intergenic not near genes chr3L_50_4445001 chr3L_4445001 0.64 RAL-361 258 chr3L 4481571 4481738 roo 7 402 45 167 '21-24 66.11 12.1 3.4 intergenic CG7465 + chr3L_45_4480001 chr3L_4480001 0.47 RAL-361 259 chr3L 5203736 5203881 jockey 15 4976 50 145 '18-32 64.49 12.2 3.8 intron shep - chr3L_50_5200001 chr3L_5200001 0.36 RAL-361 260 chr3L 5452867 5452965 copia 4944 248 30 98 '6-24 66.88 12.2 2.3 intergenic not near genes chr3L_30_5450001 chr3L_5450001 0.20 RAL-361 261 chr3L 5523592 5523748 3S18 326 5774 47 156 '15-32 64.11 10.3 4.2 intron Lkr - chr3L_47_5520001 chr3L_5520001 0.32 RAL-361 262 chr3L 5694422 5694604 297 6961 6581 31 182 '10-21 63.48 11.8 2.4 intron sif + chr3L_31_5690001 chr3L_5690001 0.32 RAL-361 263 chr3L 5777350 5777515 pogo 17 2099 57 165 '22-35 62.89 9.4 5.5 intergenic vito -,Myt1 - chr3L_57_5775001 chr3L_5775001 0.39 RAL-361 264 chr3L 6042788 6042858 Doc 78 8 41 70 '22-19 67.26 8.9 4.1 intergenic not near genes chr3L_41_6040001 chr3L_6040001 0.54 RAL-361 265 chr3L 6148534 6148595 INE-1 342 404 9 61 '4-5 70.44 9.8 0.8 intergenic not near genes chr3L_9_6145001 chr3L_6145001 0.44 RAL-361 266 chr3L 6440830 6440964 roo 8672 9033 44 134 '30-14 64.91 14.8 2.8 intron CG42747 + chr3L_44_6440001 chr3L_6440001 0.68 RAL-361 267 chr3L 6688178 6688360 hopper 1413 1407 46 182 '14-32 63.32 10.1 4.1 intergenic not near genes chr3L_46_6685001 chr3L_6685001 0.30 RAL-361 268 chr3L 6975039 6975205 pogo 2084 3 51 166 '25-26 66.05 10.7 4.4 intron Galphai - chr3L_51_6975001 chr3L_6975001 0.49 RAL-361 269 chr3L 7236602 7236789 Doc3-element 164 165 6 187 '3-3 44.67 4.2 1.2 intergenic CG14829 - chr3L_6_7235001 chr3L_7235001 0.50 RAL-361 270 chr3L 7602279 7602443 roo 400 9 59 164 '32-27 66.71 14.2 3.9 intron CG33275 + chr3L_59_7600001 chr3L_7600001 0.54 RAL-361 271 chr3L 7846997 7847140 Idefix 21 7368 8 143 '2-6 69.60 10.4 0.7 intron Pdp1 - chr3L_8_7845001 chr3L_7845001 0.25 RAL-361 272 chr3L 7909753 7909925 412 5 7542 55 172 '24-31 63.09 11.5 4.4 intron pbl - chr3L_55_7905001 chr3L_7905001 0.44 RAL-361 273 chr3L 8807285 8807439 jockey 17 4985 56 154 '25-31 64.99 12.9 4.0 intergenic CG13312 -,CG32024 + chr3L_56_8805001 chr3L_8805001 0.45 RAL-361 274 chr3L 8936839 8936985 BS 4996 5073 29 146 '19-10 64.15 9.0 2.9 intron CG43783 - chr3L_29_8935001 chr3L_8935001 0.66 RAL-361 275 chr3L 9920595 9920749 opus 7113 498 24 154 '13-11 61.37 6.2 3.3 intron CG34356 + chr3L_24_9920001 chr3L_9920001 0.54 RAL-361 276 chr3L 9922425 9922595 roo 403 8670 28 170 '6-22 69.48 9.8 2.6 intron CG34356 + chr3L_28_9920001 chr3L_9920001 0.21 RAL-361 277 chr3L 10037674 10037843 pogo 2094 8 57 169 '30-27 67.15 11.2 4.7 intron dpr6 + chr3L_57_10035001 chr3L_10035001 0.53 RAL-361 278 chr3L 10178897 10179073 opus 493 1 31 176 '21-10 69.77 10.7 2.6 intron dpr10 - chr3L_31_10175001 chr3L_10175001 0.68 RAL-361 279 chr3L 10436714 10436775 roo 8671 8732 34 61 '20-14 64.20 17.6 1.8 intergenic not near genes chr3L_34_10435001 chr3L_10435001 0.59 RAL-361 280 chr3L 10553807 10553970 3S18 5779 6102 45 163 '26-19 62.89 11.2 3.7 intron A2bp1 + chr3L_45_10550001 chr3L_10550001 0.58 RAL-361 281 chr3L 10575069 10575242 Quasimodo 4 7362 15 173 '4-11 68.85 7.7 1.7 intron A2bp1 + chr3L_15_10575001 chr3L_10575001 0.27 RAL-361 282 chr3L 11349946 11349999 I-element 5339 5286 19 53 '12-7 62.02 13.5 1.3 intergenic CR45251 - chr3L_19_11345001 chr3L_11345001 0.63 RAL-361 283 chr3L 11480100 11480324 Juan 4054 4061 8 224 '6-2 41.50 5.6 1.2 intergenic not near genes chr3L_8_11480001 chr3L_11480001 0.75 RAL-361 284 chr3L 11705214 11705377 FB 12 2 56 163 '27-29 65.18 5.9 8.1 intron CG11658 - chr3L_56_11705001 chr3L_11705001 0.48 RAL-361 285 chr3L 11711797 11711842 Doc 4271 4316 15 45 '4-11 62.91 0.0 15.0 intergenic crim -,CG14132 - chr3L_15_11710001 chr3L_11710001 0.27 RAL-361 286 chr3L 11739753 11739927 pogo 3 2094 48 174 '22-26 64.63 10.2 4.3 intron CG6024 - chr3L_48_11735001 chr3L_11735001 0.46 RAL-361 287 chr3L 11826431 11826476 INE-1 140 153 6 45 '4-2 66.48 2.2 1.9 intergenic CycA - chr3L_6_11825001 chr3L_11825001 0.67 RAL-361 288 chr3L 11834294 11834455 roo 13 401 53 161 '20-33 66.21 10.1 4.8 intergenic CG43064 - chr3L_53_11830001 chr3L_11830001 0.38 RAL-361 289 chr3L 12127503 12127684 diver 226 5891 46 181 '25-21 62.08 11.8 3.6 intergenic Ir68b -,CG34241 + chr3L_46_12125001 chr3L_12125001 0.54 RAL-361 290 chr3L 12300080 12300192 1360 15 3385 21 112 '17-4 61.00 7.2 2.6 intergenic not near genes chr3L_21_12300001 chr3L_12300001 0.81 RAL-361 291 chr3L 12634130 12634269 BS 5085 5008 21 139 '4-17 60.07 8.5 2.2 intron CR32111 + chr3L_21_12630001 chr3L_12630001 0.19 RAL-361 292 chr3L 12863563 12863805 Transpac 12 5215 40 242 '15-25 67.52 10.8 3.4 intergenic not near genes chr3L_40_12860001 chr3L_12860001 0.38 RAL-361 293 chr3L 12884446 12884600 Transpac 5194 5000 37 154 '10-27 65.34 6.9 4.7 intergenic not near genes chr3L_37_12880001 chr3L_12880001 0.27 RAL-361 294 chr3L 13022533 13022703 P-element 6 2885 60 170 '34-26 47.02 11.7 4.7 5` UTR AdenoK - chr3L_60_13020001 chr3L_13020001 0.57 RAL-361 295 chr3L 13281180 13281341 copia 4881 248 51 161 '26-25 66.40 9.2 5.0 intergenic not near genes chr3L_51_13280001 chr3L_13280001 0.51 RAL-361 296 chr3L 13347925 13348085 F-element 337 313 29 160 '1-28 68.15 11.9 2.2 intergenic not near genes chr3L_29_13345001 chr3L_13345001 0.03 RAL-361 297 chr3L 13426664 13426830 Transpac 5221 4927 57 166 '29-28 64.26 10.6 4.9 5` UTR CG14105 - chr3L_57_13425001 chr3L_13425001 0.51 RAL-361 298 chr3L 13439161 13439332 Stalker2 3 396 62 171 '26-36 64.79 12.4 4.6 intergenic CG10725 +,CG10140 - chr3L_62_13435001 chr3L_13435001 0.42 RAL-361 299 chr3L 13476063 13476229 roo 399 8669 60 166 '19-41 66.50 11.9 4.7 intergenic not near genes chr3L_60_13475001 chr3L_13475001 0.32 RAL-361 300 chr3L 13628668 13628837 copia 252 4877 50 169 '20-30 65.41 10.4 4.4 intron bru-3 - chr3L_50_13625001 chr3L_13625001 0.40 RAL-361 301 chr3L 13772901 13773054 I-element 5323 5333 16 153 '10-6 63.30 9.1 1.6 intron bru-3 - chr3L_16_13770001 chr3L_13770001 0.62 RAL-361 302 chr3L 13778690 13778790 roo 399 71 24 100 '17-7 67.02 12.4 1.8 intron bru-3 - chr3L_24_13775001 chr3L_13775001 0.71 RAL-361 303 chr3L 14049928 14050084 pogo 3 2075 36 156 '22-14 59.82 9.2 3.5 intergenic blue - chr3L_36_14045001 chr3L_14045001 0.61 RAL-361 304 chr3L 14143085 14143155 X-element 4643 4699 15 70 '4-11 62.82 9.7 1.4 intergenic not near genes chr3L_15_14140001 chr3L_14140001 0.27 RAL-361 305 chr3L 14271921 14272090 3S18 5772 336 40 169 '19-21 63.34 13.4 2.8 intergenic not near genes chr3L_40_14270001 chr3L_14270001 0.47 RAL-361 306 chr3L 14396939 14397081 BS 5007 5077 15 142 '13-2 55.30 5.2 2.4 intergenic not near genes chr3L_15_14395001 chr3L_14395001 0.87 RAL-361 307 chr3L 14548177 14548333 FB 6 5 41 156 '20-21 66.08 10.9 3.4 intron CG9238 - chr3L_41_14545001 chr3L_14545001 0.49 RAL-361 308 chr3L 14571715 14571769 Doc 3 57 7 54 '5-2 52.73 18.2 0.4 intergenic not near genes chr3L_7_14570001 chr3L_14570001 0.71 RAL-361 309 chr3L 14623430 14623593 roo 395 4 36 163 '12-24 65.06 12.1 2.7 intron CG9628 + chr3L_36_14620001 chr3L_14620001 0.33 RAL-361 310 chr3L 14697027 14697181 1360 3383 19 34 154 '21-13 64.11 13.3 2.4 intron,exon ome +,CG13474 - chr3L_34_14695001 chr3L_14695001 0.62 RAL-361 311 chr3L 14822800 14822963 mdg1 409 7044 14 163 '5-9 67.03 14.7 0.9 intron CG17839 + chr3L_14_14820001 chr3L_14820001 0.36 RAL-361 312 chr3L 14972381 14972523 P-element 8 1 49 142 '28-21 43.37 14.5 3.2 intergenic Brd + chr3L_49_14970001 chr3L_14970001 0.57 RAL-361 313 chr3L 15099527 15099665 G4 3816 3810 25 138 '10-15 55.60 12.1 1.9 intron CTPsyn + chr3L_25_15095001 chr3L_15095001 0.40 RAL-361 314 chr3L 15103775 15103937 Burdock 6140 6375 32 162 '23-9 66.59 15.5 1.9 intron CTPsyn + chr3L_32_15100001 chr3L_15100001 0.72 RAL-361 315 chr3L 15163152 15163305 hobo 2923 9 29 153 '14-15 63.19 12.8 2.1 exon CG7011 - chr3L_29_15160001 chr3L_15160001 0.48 RAL-361 316 chr3L 15480319 15480485 pogo 19 2098 22 166 '8-14 61.44 10.4 1.9 intergenic not near genes chr3L_22_15480001 chr3L_15480001 0.36 RAL-361 317 chr3L 15494612 15494777 S-element 1710 1703 13 165 '7-6 65.49 10.5 1.1 intron CG12355 - chr3L_13_15490001 chr3L_15490001 0.54 RAL-361 318 chr3L 15600861 15601023 roo 401 11 23 162 '11-12 66.85 13.4 1.6 exon RhoGAP71E + chr3L_23_15600001 chr3L_15600001 0.48 RAL-361 319 chr3L 15612592 15612745 Juan 4206 9 19 153 '14-5 62.68 15.2 1.2 intron CG13449 - chr3L_19_15610001 chr3L_15610001 0.74 RAL-361 320 chr3L 15789949 15790115 blood 368 7023 28 166 '14-14 66.69 12.2 2.1 intergenic not near genes chr3L_28_15785001 chr3L_15785001 0.50 RAL-361 321 chr3L 16013263 16013360 mdg1 7069 30 4 97 '1-3 51.12 2.1 1.3 intergenic not near genes chr3L_4_16010001 chr3L_16010001 0.25 RAL-361 322 chr3L 16137263 16137500 Juan 4033 4190 36 237 '27-9 63.97 16.1 2.1 5` UTR CG5157 - chr3L_36_16135001 chr3L_16135001 0.75 RAL-361 323 chr3L 16164286 16164333 P-element 2812 2870 17 47 '7-10 46.52 19.3 0.8 5` UTR CG5151 - chr3L_17_16160001 chr3L_16160001 0.41 RAL-361 324 chr3L 16258863 16259026 Quasimodo 7362 14 20 163 '10-10 64.75 8.7 2.1 intergenic CG13053 - chr3L_20_16255001 chr3L_16255001 0.50 RAL-361 325 chr3L 16427383 16427543 roo 12 9064 63 160 '22-41 66.22 10.8 5.3 intron,intron CG33158 +,dsx-c73A - chr3L_63_16425001 chr3L_16425001 0.35 RAL-361 326 chr3L 16691470 16691533 G2 2723 2765 4 63 '3-1 59.09 9.6 0.4 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_4_16690001 chr3L_16690001 0.75 RAL-361 327 chr3L 16764769 16764922 I-element 8 5345 40 153 '21-19 65.28 8.0 4.4 intergenic not near genes chr3L_40_16760001 chr3L_16760001 0.53 RAL-361 328 chr3L 16925986 16926123 opus 7023 483 8 137 '3-5 64.34 10.6 0.7 intron CG13023 - chr3L_8_16925001 chr3L_16925001 0.38 RAL-361 329 chr3L 17207614 17207764 297 364 6583 21 150 '13-8 68.79 9.1 2.1 intron Rbp6 - chr3L_21_17205001 chr3L_17205001 0.62 RAL-361 330 chr3L 17307728 17307893 roo 399 8668 35 165 '12-23 69.15 13.3 2.4 intergenic not near genes chr3L_35_17305001 chr3L_17305001 0.34 RAL-361 331 chr3L 17503206 17503263 pogo 44 7 10 57 '7-3 62.54 16.2 0.6 intron Oatp74D + chr3L_10_17500001 chr3L_17500001 0.70 RAL-361 332 chr3L 17613556 17613750 roo 8671 407 30 194 '15-15 62.05 12.8 2.2 intron Eip74EF - chr3L_30_17610001 chr3L_17610001 0.50 RAL-361 333 chr3L 17684929 17685087 roo 397 8675 14 158 '4-10 66.91 15.6 0.8 intergenic not near genes chr3L_14_17680001 chr3L_17680001 0.29 RAL-361 334 chr3L 17706332 17706481 Juan 4206 8 45 149 '23-22 63.49 9.6 4.2 intron Ccn + chr3L_45_17705001 chr3L_17705001 0.51 RAL-361 335 chr3L 17718950 17719112 297 6593 386 17 162 '13-4 65.62 13.4 1.2 intron Ccn + chr3L_17_17715001 chr3L_17715001 0.76 RAL-361 336 chr3L 17770264 17770425 hopper 6 14 21 161 '15-6 66.45 14.9 1.3 intergenic not near genes chr3L_21_17770001 chr3L_17770001 0.71 RAL-361 337 chr3L 17788698 17788841 Stalker2 5 370 18 143 '12-6 63.58 13.1 1.3 intergenic not near genes chr3L_18_17785001 chr3L_17785001 0.67 RAL-361 338 chr3L 17962203 17962375 S-element 1709 5 21 172 '13-8 65.76 13.6 1.4 intron Eip75B - chr3L_21_17960001 chr3L_17960001 0.62 RAL-361 339 chr3L 17971121 17971280 P-element 14 2884 24 159 '11-13 46.32 14.3 1.6 intron Eip75B - chr3L_24_17970001 chr3L_17970001 0.46 RAL-361 340 chr3L 18122251 18122416 invader1 398 3621 24 165 '13-11 60.04 13.2 1.7 intergenic CG42853 - chr3L_24_18120001 chr3L_18120001 0.54 RAL-361 341 chr3L 18123644 18123840 copia 245 4767 16 196 '9-7 63.08 9.9 1.5 intergenic not near genes chr3L_16_18120001 chr3L_18120001 0.56 RAL-361 342 chr3L 18126563 18126720 copia 242 1 9 157 '5-4 71.88 13.2 0.6 intergenic not near genes chr3L_9_18125001 chr3L_18125001 0.56 RAL-361 343 chr3L 18133152 18133311 1360 3380 3378 42 159 '26-16 66.91 9.5 4.0 intergenic Cyp312a1 - chr3L_42_18130001 chr3L_18130001 0.62 RAL-361 344 chr3L 18189387 18189520 297 13 6939 9 133 '1-8 68.53 16.2 0.5 intergenic not near genes chr3L_9_18185001 chr3L_18185001 0.11 RAL-361 345 chr3L 18209239 18209381 Tc3 311 316 4 142 '1-3 65.00 5.0 0.7 intergenic not near genes chr3L_4_18205001 chr3L_18205001 0.25 RAL-361 346 chr3L 18245822 18245873 pogo 67 16 13 51 '8-5 64.18 26.7 0.5 intergenic not near genes chr3L_13_18245001 chr3L_18245001 0.62 RAL-361 347 chr3L 18246655 18246720 pogo 2033 2098 23 65 '12-11 65.36 9.4 2.2 intergenic not near genes chr3L_23_18245001 chr3L_18245001 0.52 RAL-361 348 chr3L 18422696 18422858 412 11 7538 7 162 '5-2 71.77 12.2 0.5 intergenic not near genes chr3L_7_18420001 chr3L_18420001 0.71 RAL-361 349 chr3L 18425441 18425610 copia 252 3 26 169 '9-17 60.25 3.4 5.9 intergenic not near genes chr3L_26_18425001 chr3L_18425001 0.35 RAL-361 350 chr3L 18489693 18489845 Burdock 6372 11 11 152 '7-4 66.76 14.7 0.7 intron AstC-R2 - chr3L_11_18485001 chr3L_18485001 0.64 RAL-361 351 chr3L 18498373 18498552 roo 8667 410 37 179 '22-15 64.85 12.9 2.7 intron AstC-R2 - chr3L_37_18495001 chr3L_18495001 0.59 RAL-361 352 chr3L 18500911 18500977 jockey 4703 4769 24 66 '9-15 64.35 18.0 1.3 intron AstC-R2 - chr3L_24_18500001 chr3L_18500001 0.38 RAL-361 353 chr3L 18638477 18638695 Burdock 248 6135 27 218 '14-13 61.47 7.3 3.3 intron MYPT-75D + chr3L_27_18635001 chr3L_18635001 0.52 RAL-361 354 chr3L 18815292 18815437 pogo 13 2074 35 145 '22-13 60.89 4.8 6.0 intron CG14073 - chr3L_35_18815001 chr3L_18815001 0.63 RAL-361 355 chr3L 19153052 19153218 HMS-Beagle 6805 7035 50 166 '28-22 65.34 11.5 4.0 intron fz2 - chr3L_50_19150001 chr3L_19150001 0.56 RAL-361 356 chr3L 19157586 19157679 412 8 7493 31 93 '19-12 64.75 11.2 2.5 intron fz2 - chr3L_31_19155001 chr3L_19155001 0.61 RAL-361 357 chr3L 19259804 19259973 transib2 8 2820 63 169 '32-31 66.19 11.3 5.1 intron nes - chr3L_63_19255001 chr3L_19255001 0.51 RAL-361 358 chr3L 19339296 19339470 Tc1 1641 9 35 174 '6-29 65.71 8.1 3.8 intergenic not near genes chr3L_35_19335001 chr3L_19335001 0.17 RAL-361 359 chr3L 19349833 19349977 jockey 4986 4685 57 144 '25-32 64.90 12.1 4.4 intron CG32206 - chr3L_57_19345001 chr3L_19345001 0.44 RAL-361 360 chr3L 19375456 19375520 F-element 367 303 27 64 '12-15 62.82 11.8 2.1 intron CG32206 - chr3L_27_19375001 chr3L_19375001 0.44 RAL-361 361 chr3L 19429869 19430009 BS 4997 5071 45 140 '29-16 65.92 9.7 4.2 intergenic not near genes chr3L_45_19425001 chr3L_19425001 0.64 RAL-361 362 chr3L 19454699 19454867 Burdock 250 9 38 168 '23-15 65.75 11.6 3.0 intergenic CR45434 + chr3L_38_19450001 chr3L_19450001 0.61 RAL-361 363 chr3L 19788069 19788237 FB 3 6 61 168 '34-27 66.10 9.4 5.9 intron,intron CG42637 -,Gyc76C - chr3L_61_19785001 chr3L_19785001 0.56 RAL-361 364 chr3L 19845558 19845729 S-element 1708 1712 27 171 '15-12 66.86 12.4 2.0 5` UTR Papss + chr3L_27_19845001 chr3L_19845001 0.56 RAL-361 365 chr3L 19942435 19942597 roo 8676 402 54 162 '22-32 64.72 13.5 3.7 intron Ac76E + chr3L_54_19940001 chr3L_19940001 0.41 RAL-361 366 chr3L 19965055 19965119 Doc 8 72 29 64 '12-17 63.97 3.4 6.6 intron Ac76E + chr3L_29_19965001 chr3L_19965001 0.41 RAL-361 367 chr3L 20030312 20030475 opus 12 7494 42 163 '19-23 66.53 10.3 3.7 intergenic not near genes chr3L_42_20030001 chr3L_20030001 0.45 RAL-361 368 chr3L 20060662 20060830 hobo 2933 4 50 168 '25-25 64.86 12.2 3.8 3` UTR sNPF-R - chr3L_50_20060001 chr3L_20060001 0.50 RAL-361 369 chr3L 20065219 20065375 hobo 19 2936 50 156 '21-29 63.29 11.9 3.9 intron sNPF-R - chr3L_50_20065001 chr3L_20065001 0.42 RAL-361 370 chr3L 20070036 20070099 hobo 13 69 9 63 '3-6 63.65 26.2 0.3 intron sNPF-R - chr3L_9_20070001 chr3L_20070001 0.33 RAL-361 371 chr3L 20079013 20079179 Tabor 7320 6850 33 166 '17-16 65.04 14.8 2.1 intron sNPF-R - chr3L_33_20075001 chr3L_20075001 0.52 RAL-361 372 chr3L 20506021 20506178 mdg3 5260 5482 32 157 '13-19 61.94 16.0 1.9 intron CG32425 + chr3L_32_20505001 chr3L_20505001 0.41 RAL-361 373 chr3L 21129451 21129604 297 14 6960 17 153 '10-7 63.04 16.6 1.0 intron ko - chr3L_17_21125001 chr3L_21125001 0.59 RAL-361 374 chr3L 21408507 21408676 hopper 1408 5 20 169 '11-9 68.14 12.4 1.5 intron rgn + chr3L_20_21405001 chr3L_21405001 0.55 RAL-361 375 chr3L 21428814 21428879 roo 334 400 17 65 '9-8 64.91 17.3 0.9 intron,intron barc -,CG33288 + chr3L_17_21425001 chr3L_21425001 0.53 RAL-361 376 chr3L 21558552 21558720 Stalker2 7253 395 30 168 '17-13 63.10 13.5 2.1 intergenic CG7173 -,CapaR - chr3L_30_21555001 chr3L_21555001 0.57 RAL-361 377 chr3L 21864759 21864917 pogo 2084 8 20 158 '7-13 66.77 16.2 1.2 intron mub + chr3L_20_21860001 chr3L_21860001 0.35 RAL-361 378 chr3L 21909785 21909951 roo 8671 401 30 166 '12-18 64.67 13.0 2.1 intron mub + chr3L_30_21905001 chr3L_21905001 0.40 RAL-361 379 chr3L 21987505 21987664 roo 9059 9 38 159 '17-21 63.86 12.9 2.7 intergenic Act79B + chr3L_38_21985001 chr3L_21985001 0.45 RAL-361 380 chr3L 22106697 22106843 Quasimodo 28 7359 28 146 '16-12 67.08 10.8 2.4 intergenic not near genes chr3L_28_22105001 chr3L_22105001 0.57 RAL-361 381 chr3L 22107649 22107701 F-element 35 31 10 52 '5-5 63.63 16.3 0.6 intergenic not near genes chr3L_10_22105001 chr3L_22105001 0.50 RAL-361 382 chr3L 22111025 22111195 Burdock 249 5 36 170 '16-20 66.51 14.4 2.3 intergenic not near genes chr3L_36_22110001 chr3L_22110001 0.44 RAL-361 383 chr3L 22314486 22314666 Stalker2 7649 7247 41 180 '19-22 65.95 12.4 3.1 intron Ten-m - chr3L_41_22310001 chr3L_22310001 0.46 RAL-361 384 chr3L 22345936 22346094 copia 4874 238 24 158 '14-10 64.16 13.1 1.7 intron Ten-m - chr3L_24_22345001 chr3L_22345001 0.58 RAL-361 385 chr3L 22346833 22346984 jockey 4684 4983 8 151 '5-3 65.23 14.5 0.5 intron Ten-m - chr3L_8_22345001 chr3L_22345001 0.62 RAL-361 386 chr3L 22421423 22421484 F-element 47 11 26 61 '17-9 55.28 28.9 0.9 intergenic CR45237 - chr3L_26_22420001 chr3L_22420001 0.65 RAL-361 387 chr3L 22425830 22425983 roo 13 394 28 153 '11-17 66.46 19.2 1.4 intergenic not near genes chr3L_28_22425001 chr3L_22425001 0.39 RAL-361 388 chr3L 22470796 22470952 P-element 2880 10 40 156 '19-21 49.22 12.6 2.9 intron CG11426 + chr3L_40_22470001 chr3L_22470001 0.47 RAL-361 389 chr3L 22497940 22498106 jockey 9 4986 43 166 '19-24 67.35 16.0 2.5 intergenic CR45431 + chr3L_43_22495001 chr3L_22495001 0.44 RAL-361 390 chr3L 22518956 22519129 pogo 2091 89 18 173 '15-3 68.58 11.0 1.5 intergenic not near genes chr3L_18_22515001 chr3L_22515001 0.83 RAL-361 391 chr3L 22635637 22635789 hopper 4 1389 14 152 '12-2 65.48 10.7 1.2 intron CG14459 - chr3L_14_22635001 chr3L_22635001 0.86 RAL-361 392 chr3L 22638744 22638899 Juan 4201 4095 25 155 '10-15 62.64 11.7 2.0 intergenic not near genes chr3L_25_22635001 chr3L_22635001 0.40 RAL-361 393 chr3L 22848539 22848692 INE-1 571 541 9 153 '8-1 78.45 14.5 0.6 intergenic not near genes chr3L_9_22845001 chr3L_22845001 0.89 RAL-361 394 chr3L 22935679 22935739 F-element 22 82 12 60 '7-5 60.94 13.0 0.9 intergenic not near genes chr3L_12_22935001 chr3L_22935001 0.58 RAL-361 395 chr3L 22953102 22953269 297 5 6965 21 167 '14-7 65.62 10.3 1.9 intergenic not near genes chr3L_21_22950001 chr3L_22950001 0.67 RAL-361 396 chr3L 23146447 23146493 1360 16 62 11 46 '7-4 61.54 24.6 0.4 intergenic not near genes chr3L_11_23145001 chr3L_23145001 0.64 RAL-361 397 chr3L 23233574 23233642 S2 299 231 9 68 '6-3 66.16 14.6 0.6 intron nAChRalpha4 + chr3L_9_23230001 chr3L_23230001 0.67 RAL-361 398 chr3L 23263925 23264092 S-element 1705 6 27 167 '15-12 70.61 15.5 1.6 exon nAChRalpha4 + chr3L_27_23260001 chr3L_23260001 0.56 RAL-361 399 chr3L 23282705 23282843 Juan 4197 15 15 138 '7-8 62.40 11.5 1.2 intron nAChRalpha4 + chr3L_15_23280001 chr3L_23280001 0.47 RAL-361 400 chr3L 23727531 23727687 3S18 5776 329 20 156 '17-3 64.94 10.9 1.7 exon CG40298 + chr3L_20_23725001 chr3L_23725001 0.85 RAL-361 401 chr3L 23746964 23747151 INE-1 120 499 4 187 '1-3 52.09 15.0 0.2 intron CG17698 + chr3L_4_23745001 chr3L_23745001 0.25 RAL-361 402 chr3L 23839692 23839759 McClintock 6004 5955 6 67 '3-3 69.24 3.6 1.3 intergenic CG40470 - chr3L_6_23835001 chr3L_23835001 0.50 RAL-361 403 chr3L 23848590 23848644 R1A1-element 4975 5033 8 54 '5-3 62.18 11.4 0.6 intron CG40470 - chr3L_8_23845001 chr3L_23845001 0.62 RAL-361 404 chr3L 24272056 24272124 gypsy11 4024 157 9 68 '8-1 66.22 4.9 1.5 intron Snap25 + chr3L_9_24270001 chr3L_24270001 0.89 RAL-361 405 chr3L 25078400 25078447 Transpac 4989 4942 9 47 '5-4 65.51 17.1 0.5 intergenic not near genes chr3L_9_25075001 chr3L_25075001 0.56 RAL-361 406 chr3L 25162552 25162668 1360 26 3355 7 116 '4-3 60.34 18.7 0.4 intergenic not near genes chr3L_7_25160001 chr3L_25160001 0.57 RAL-361 407 chr3L 25232764 25232872 accord2 7580 34 11 108 '6-5 57.59 14.7 0.7 intergenic not near genes chr3L_11_25230001 chr3L_25230001 0.55 RAL-361 408 chr3L 25272504 25272567 1360 18 100 18 63 '5-13 61.35 12.5 1.3 intron CG40467 - chr3L_18_25270001 chr3L_25270001 0.28 RAL-361 409 chr3L 25323154 25323256 Max-element 9 232 8 102 '5-3 64.21 10.0 0.7 intergenic not near genes chr3L_8_25320001 chr3L_25320001 0.62 RAL-361 410 chr3L 25484260 25484413 copia 4876 235 17 153 '9-8 65.54 8.8 1.7 intron CG41343 - chr3L_17_25480001 chr3L_25480001 0.53 RAL-361 411 chr3L 25492540 25492580 Porto1 468 428 9 40 '4-5 62.86 9.9 0.8 intron CG41343 - chr3L_9_25490001 chr3L_25490001 0.44 RAL-361 412 chr3L 25850480 25850535 Tirant 381 8433 5 55 '4-1 66.71 18.3 0.3 intron CG40178 - chr3L_5_25850001 chr3L_25850001 0.80 RAL-361 413 chr3L 26294660 26294702 1360 133 135 9 42 '4-5 62.85 24.2 0.4 intergenic not near genes chr3L_9_26290001 chr3L_26290001 0.44 RAL-361 414 chr3L 27171935 27172080 HMS-Beagle 26 235 18 145 '10-8 63.33 15.3 1.1 intergenic not near genes chr3L_18_27170001 chr3L_27170001 0.56 RAL-361 415 chr3L 27174864 27175005 pogo 2095 41 14 141 '7-7 63.71 10.2 1.2 intergenic not near genes chr3L_14_27170001 chr3L_27170001 0.50 RAL-361 416 chr3L 27334528 27334692 roo 9 401 30 164 '18-12 65.40 12.3 2.3 intron Dbp80 + chr3L_30_27330001 chr3L_27330001 0.60 RAL-361 417 chr3L 27356060 27356113 Tc3 1678 1670 7 53 '4-3 65.89 22.4 0.3 intron Dbp80 + chr3L_7_27355001 chr3L_27355001 0.57 RAL-361 418 chr3L 27414334 27414464 mdg1 416 46 16 130 '13-3 66.09 15.2 1.0 intron Dbp80 + chr3L_16_27410001 chr3L_27410001 0.81 RAL-361 419 chr3L 27415189 27415347 transib2 2809 8 14 158 '6-8 66.02 15.1 0.9 intron Dbp80 + chr3L_14_27415001 chr3L_27415001 0.43 RAL-361 420 chr3R 723167 723219 gypsy6 121 7488 5 52 '3-2 63.68 13.0 0.4 intergenic not near genes chr3R_5_720001 chr3R_720001 0.60 RAL-361 421 chr3R 1047928 1048073 Stalker2 7640 7268 25 145 '20-5 61.41 6.0 3.6 intron CG15831 + chr3R_25_1045001 chr3R_1045001 0.80 RAL-361 422 chr3R 1391381 1391440 gypsy 7061 413 8 59 '1-7 66.02 11.3 0.7 intron CG40155 + chr3R_8_1390001 chr3R_1390001 0.12 RAL-361 423 chr3R 2474267 2474406 Juan 4190 3974 6 139 '5-1 61.33 9.4 0.6 intergenic not near genes chr3R_6_2470001 chr3R_2470001 0.83 RAL-361 424 chr3R 2647465 2647615 opus 22 7491 11 150 '6-5 62.30 7.7 1.3 intron CG41056 - chr3R_11_2645001 chr3R_2645001 0.55 RAL-361 425 chr3R 2999751 2999872 McClintock 435 5969 6 121 '3-3 66.11 6.8 0.8 intron CG42618 - chr3R_6_2995001 chr3R_2995001 0.50 RAL-361 426 chr3R 3596912 3597034 Transpac 9 259 19 122 '15-4 68.39 19.3 0.9 intergenic not near genes chr3R_19_3595001 chr3R_3595001 0.79 RAL-361 427 chr3R 3748713 3748831 1360 3261 3272 4 118 '3-1 61.05 14.9 0.3 intergenic not near genes chr3R_4_3745001 chr3R_3745001 0.75 RAL-361 428 chr3R 3878386 3878455 Doc 9 78 24 69 '10-14 66.36 16.3 1.4 intergenic not near genes chr3R_24_3875001 chr3R_3875001 0.42 RAL-361 429 chr3R 4549191 4549347 1731 303 12 20 156 '7-13 63.28 9.8 1.9 intron CG34357 - chr3R_20_4545001 chr3R_4545001 0.35 RAL-361 430 chr3R 4553296 4553446 Juan 4199 8 22 150 '12-10 62.07 7.7 2.5 intron CG34357 - chr3R_22_4550001 chr3R_4550001 0.55 RAL-361 431 chr3R 4554261 4554485 Bari1 1700 75 34 224 '19-15 66.41 12.2 2.6 intron CG34357 - chr3R_34_4550001 chr3R_4550001 0.56 RAL-361 432 chr3R 4623939 4623993 Doc 65 11 10 54 '4-6 68.56 18.5 0.5 intron 5-HT2A + chr3R_10_4620001 chr3R_4620001 0.40 RAL-361 433 chr3R 5245537 5245705 1360 3381 3386 22 168 '7-15 70.25 15.7 1.3 intron CG12163 - chr3R_22_5245001 chr3R_5245001 0.32 RAL-361 434 chr3R 5305047 5305204 roo 8676 397 16 157 '9-7 69.50 16.2 0.9 intron mtd - chr3R_16_5305001 chr3R_5305001 0.56 RAL-361 435 chr3R 5323738 5323887 P-element 16 2874 39 149 '15-24 46.23 16.0 2.3 intron mtd - chr3R_39_5320001 chr3R_5320001 0.38 RAL-361 436 chr3R 5348603 5348754 blood 7362 7014 29 151 '17-12 65.60 15.8 1.7 intron mtd - chr3R_29_5345001 chr3R_5345001 0.59 RAL-361 437 chr3R 5500197 5500333 I-element 32 5349 12 136 '5-7 64.88 13.1 0.9 intron CG31547 - chr3R_12_5500001 chr3R_5500001 0.42 RAL-361 438 chr3R 5539674 5539844 pogo 2090 3 34 170 '11-23 67.71 9.5 3.2 3` UTR CG2519 - chr3R_34_5535001 chr3R_5535001 0.32 RAL-361 439 chr3R 5594963 5595127 jockey 4984 4676 39 164 '24-15 66.20 15.2 2.4 3` UTR Vha26 + chr3R_39_5590001 chr3R_5590001 0.62 RAL-361 440 chr3R 5607102 5607264 flea 4761 240 21 162 '13-8 66.13 15.7 1.3 intergenic Rga - chr3R_21_5605001 chr3R_5605001 0.62 RAL-361 441 chr3R 5705587 5705762 S-element 1708 1714 26 175 '14-12 71.83 12.9 1.9 intron plx + chr3R_26_5705001 chr3R_5705001 0.54 RAL-361 442 chr3R 5716955 5717096 P-element 6 2875 26 141 '13-13 46.06 14.5 1.7 intergenic cas - chr3R_26_5715001 chr3R_5715001 0.50 RAL-361 443 chr3R 5800034 5800293 Stalker2 397 7249 34 259 '23-11 63.61 14.5 2.2 intergenic CG10979 + chr3R_34_5800001 chr3R_5800001 0.68 RAL-361 444 chr3R 6090973 6091028 297 6909 383 25 55 '14-11 66.61 10.9 2.1 intron Gasp - chr3R_25_6090001 chr3R_6090001 0.56 RAL-361 445 chr3R 6092765 6092931 copia 4878 250 47 166 '27-20 66.45 11.0 3.9 intron Gasp - chr3R_47_6090001 chr3R_6090001 0.57 RAL-361 446 chr3R 6411856 6412021 297 379 6583 17 165 '6-11 67.27 15.0 1.1 intron gpp + chr3R_17_6410001 chr3R_6410001 0.35 RAL-361 447 chr3R 7100950 7101111 pogo 2086 8 24 161 '9-15 64.81 20.9 1.1 intron Alh - chr3R_24_7100001 chr3R_7100001 0.38 RAL-361 448 chr3R 7122219 7122392 S-element 1713 8 14 173 '10-4 73.89 17.7 0.7 intron Alh - chr3R_14_7120001 chr3R_7120001 0.71 RAL-361 449 chr3R 7166988 7167140 Tabor 7304 6848 19 152 '8-11 60.80 14.4 1.2 intron sas + chr3R_19_7165001 chr3R_7165001 0.42 RAL-361 450 chr3R 7381394 7381449 opus 7441 493 14 55 '5-9 69.03 8.7 1.4 intergenic not near genes chr3R_14_7380001 chr3R_7380001 0.36 RAL-361 451 chr3R 7387476 7387536 F-element 71 11 14 60 '7-7 57.81 19.0 0.7 5` UTR CR45560 + chr3R_14_7385001 chr3R_7385001 0.50 RAL-361 452 chr3R 7485039 7485198 jockey 13 4981 25 159 '12-13 68.08 15.7 1.5 intergenic not near genes chr3R_25_7485001 chr3R_7485001 0.48 RAL-361 453 chr3R 7492375 7492523 1360 3365 7 19 148 '7-12 65.34 15.8 1.1 intron alpha-Est10 - chr3R_19_7490001 chr3R_7490001 0.37 RAL-361 454 chr3R 7543728 7543896 Stalker2 400 10 31 168 '17-14 64.18 12.8 2.2 intron alpha-Est2 + chr3R_31_7540001 chr3R_7540001 0.55 RAL-361 455 chr3R 7690322 7690392 Doc 74 4 24 70 '13-11 65.82 16.1 1.4 intron Nlg1 + chr3R_24_7690001 chr3R_7690001 0.54 RAL-361 456 chr3R 7764312 7764461 17.6 479 6943 21 149 '12-9 65.74 10.5 1.8 intergenic not near genes chr3R_21_7760001 chr3R_7760001 0.57 RAL-361 457 chr3R 7837033 7837202 Tabor 480 6846 31 169 '16-15 66.42 9.8 2.9 intron CG34384 + chr3R_31_7835001 chr3R_7835001 0.52 RAL-361 458 chr3R 7885676 7885745 Doc 4348 4414 10 69 '6-4 68.85 14.9 0.6 intron CG17816 - chr3R_10_7885001 chr3R_7885001 0.60 RAL-361 459 chr3R 8017710 8017844 mdg1 7052 389 15 134 '7-8 66.03 16.4 0.9 intron CG2747 - chr3R_15_8015001 chr3R_8015001 0.47 RAL-361 460 chr3R 8109702 8110049 1360 3379 3179 15 347 '14-1 65.32 15.9 0.9 intron puc + chr3R_15_8105001 chr3R_8105001 0.93 RAL-361 461 chr3R 8423903 8424073 copia 4875 251 27 170 '18-9 66.25 13.1 1.9 intron CG45263 - chr3R_27_8420001 chr3R_8420001 0.67 RAL-361 462 chr3R 8487379 8487520 blood 7023 7362 15 141 '11-4 63.54 14.9 0.9 intergenic not near genes chr3R_15_8485001 chr3R_8485001 0.73 RAL-361 463 chr3R 8492812 8492976 blood 7379 7018 33 164 '18-15 65.08 12.8 2.4 intergenic not near genes chr3R_33_8490001 chr3R_8490001 0.55 RAL-361 464 chr3R 8559591 8559761 opus 7491 2 33 170 '20-13 66.06 13.2 2.3 3` UTR pch2 - chr3R_33_8555001 chr3R_8555001 0.61 RAL-361 465 chr3R 8587088 8587277 roo 106 397 37 189 '22-15 66.89 13.3 2.6 intron 5-HT2B + chr3R_37_8585001 chr3R_8585001 0.59 RAL-361 466 chr3R 8637736 8637897 mdg1 7454 7053 12 161 '2-10 65.13 13.3 0.8 intergenic not near genes chr3R_12_8635001 chr3R_8635001 0.17 RAL-361 467 chr3R 8811118 8811285 1360 1 3378 28 167 '15-13 69.09 14.9 1.8 intron CG9837 - chr3R_28_8810001 chr3R_8810001 0.54 RAL-361 468 chr3R 8873442 8873543 297 6612 58 9 101 '3-6 65.38 16.9 0.5 intron pyd - chr3R_9_8870001 chr3R_8870001 0.33 RAL-361 469 chr3R 8954167 8954332 roo 15 408 45 165 '21-24 64.23 15.2 2.8 intron CG11966 - chr3R_45_8950001 chr3R_8950001 0.47 RAL-361 470 chr3R 9054079 9054233 P-element 13 2876 31 154 '17-14 52.50 16.2 1.8 intron Kdm2 + chr3R_31_9050001 chr3R_9050001 0.55 RAL-361 471 chr3R 9106146 9106294 1360 17 3375 11 148 '4-7 61.43 12.7 0.8 intron pum - chr3R_11_9105001 chr3R_9105001 0.36 RAL-361 472 chr3R 9169562 9169709 opus 3 7471 10 147 '6-4 65.25 11.3 0.8 intron pum - chr3R_10_9165001 chr3R_9165001 0.60 RAL-361 473 chr3R 9347282 9347446 P-element 2878 5 53 164 '28-25 46.49 17.6 2.8 intron CG45050 + chr3R_53_9345001 chr3R_9345001 0.53 RAL-361 474 chr3R 9419120 9419285 P-element 2883 9 32 165 '27-5 51.72 13.2 2.3 intron ps + chr3R_32_9415001 chr3R_9415001 0.84 RAL-361 475 chr3R 9624904 9625073 opus 7493 7 19 169 '13-6 66.54 12.6 1.4 3` UTR CG8312 + chr3R_19_9620001 chr3R_9620001 0.68 RAL-361 476 chr3R 9977332 9977377 jockey 15 66 9 45 '6-3 53.51 18.0 0.5 intron Glut4EF + chr3R_9_9975001 chr3R_9975001 0.67 RAL-361 477 chr3R 9995241 9995397 roo 8679 399 42 156 '28-14 67.08 20.7 1.9 3` UTR Glut4EF + chr3R_42_9995001 chr3R_9995001 0.67 RAL-361 478 chr3R 10119504 10119667 hopper 1403 5 19 163 '12-7 66.19 17.5 1.0 3` UTR CG3940 + chr3R_19_10115001 chr3R_10115001 0.63 RAL-361 479 chr3R 10227251 10227327 jockey 14 14 18 76 '6-12 66.87 16.7 1.0 intron CG42795 + chr3R_18_10225001 chr3R_10225001 0.33 RAL-361 480 chr3R 10596066 10596216 Tirant 26 391 28 150 '11-17 63.81 13.9 1.9 intron hth - chr3R_28_10595001 chr3R_10595001 0.39 RAL-361 481 chr3R 10615435 10615601 roo 7 401 33 166 '16-17 69.34 14.8 2.1 intergenic not near genes chr3R_33_10615001 chr3R_10615001 0.48 RAL-361 482 chr3R 10729086 10729251 Transpac 4929 303 19 165 '12-7 66.20 12.4 1.4 intergenic not near genes chr3R_19_10725001 chr3R_10725001 0.63 RAL-361 483 chr3R 10933517 10933679 roo 405 16 44 162 '23-21 66.29 13.8 3.0 intergenic not near genes chr3R_44_10930001 chr3R_10930001 0.52 RAL-361 484 chr3R 10954205 10954274 Doc 5 74 22 69 '5-17 65.13 19.0 1.1 intergenic not near genes chr3R_22_10950001 chr3R_10950001 0.23 RAL-361 485 chr3R 11004000 11004099 297 6583 358 5 99 '2-3 63.43 16.2 0.3 intron CG34114 + chr3R_5_11000001 chr3R_11000001 0.40 RAL-361 486 chr3R 11010917 11011078 I-element 1 5348 31 161 '16-15 65.13 8.7 3.2 intron CG34114 + chr3R_31_11010001 chr3R_11010001 0.52 RAL-361 487 chr3R 11039635 11039736 Quasimodo 7362 13 5 101 '3-2 54.88 10.7 0.4 intron CG34114 + chr3R_5_11035001 chr3R_11035001 0.60 RAL-361 488 chr3R 11108304 11108467 hopper 15 1412 27 163 '11-16 64.62 13.4 1.9 intergenic not near genes chr3R_27_11105001 chr3R_11105001 0.41 RAL-361 489 chr3R 11126609 11126762 Ivk 5370 13 27 153 '11-16 64.78 14.6 1.7 3` UTR Ugt86Dd - chr3R_27_11125001 chr3R_11125001 0.41 RAL-361 490 chr3R 11135969 11136132 mdg1 6 409 32 163 '20-12 62.34 11.6 2.5 intergenic not near genes chr3R_32_11135001 chr3R_11135001 0.62 RAL-361 491 chr3R 11154037 11154195 pogo 2086 11 20 158 '11-9 65.96 15.6 1.2 intergenic Ugt86Di - chr3R_20_11150001 chr3R_11150001 0.55 RAL-361 492 chr3R 11449636 11449764 hopper 1370 1409 34 128 '14-20 64.75 16.7 1.9 intron,intron sals -,CG17230 + chr3R_34_11445001 chr3R_11445001 0.41 RAL-361 493 chr3R 11479286 11479453 297 6587 385 29 167 '10-19 66.87 15.5 1.8 intergenic not near genes chr3R_29_11475001 chr3R_11475001 0.34 RAL-361 494 chr3R 11526836 11527004 Idefix 7383 3 18 168 '10-8 65.59 12.7 1.3 intergenic not near genes chr3R_18_11525001 chr3R_11525001 0.56 RAL-361 495 chr3R 11549901 11549944 Quasimodo 60 17 5 43 '2-3 68.96 12.1 0.4 intergenic not near genes chr3R_5_11545001 chr3R_11545001 0.40 RAL-361 496 chr3R 11605144 11605258 pogo 2095 64 24 114 '16-8 70.61 16.4 1.4 intron Jupiter - chr3R_24_11605001 chr3R_11605001 0.67 RAL-361 497 chr3R 11774459 11774610 FB 15 11 24 151 '11-13 65.67 13.6 1.6 intron l(3)neo38 - chr3R_24_11770001 chr3R_11770001 0.46 RAL-361 498 chr3R 11937164 11937319 pogo 2085 13 24 155 '12-12 66.35 14.3 1.6 intron Cad87A - chr3R_24_11935001 chr3R_11935001 0.50 RAL-361 499 chr3R 12021402 12021533 opus 486 111 30 131 '20-10 58.03 14.6 1.9 intergenic not near genes chr3R_30_12020001 chr3R_12020001 0.67 RAL-361 500 chr3R 12042388 12042515 412 7539 7079 13 127 '3-10 58.87 15.7 0.8 exon CG14736 + chr3R_13_12040001 chr3R_12040001 0.23 RAL-361 501 chr3R 12054873 12055034 Stalker2 6 7637 27 161 '14-13 62.54 13.3 1.9 intergenic not near genes chr3R_27_12050001 chr3R_12050001 0.52 RAL-361 502 chr3R 12136224 12136389 roo 7 400 24 165 '11-13 65.29 18.2 1.2 intergenic not near genes chr3R_24_12135001 chr3R_12135001 0.46 RAL-361 503 chr3R 12161328 12161392 F-element 78 14 6 64 '4-2 63.42 21.3 0.3 intergenic not near genes chr3R_6_12160001 chr3R_12160001 0.67 RAL-361 504 chr3R 12199824 12199885 jockey 4610 4555 15 61 '8-7 62.35 15.8 0.9 intergenic CG3809 + chr3R_15_12195001 chr3R_12195001 0.53 RAL-361 505 chr3R 12363813 12363876 jockey 72 16 18 63 '11-7 68.24 13.4 1.2 3` UTR Tim17a1 - chr3R_18_12360001 chr3R_12360001 0.61 RAL-361 506 chr3R 12393392 12393543 roo 400 8685 26 151 '13-13 68.03 20.1 1.2 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_26_12390001 chr3R_12390001 0.50 RAL-361 507 chr3R 12548605 12548782 hobo 2 2710 55 177 '20-35 65.48 14.6 3.5 intergenic Octbeta3R - chr3R_55_12545001 chr3R_12545001 0.36 RAL-361 508 chr3R 12570643 12570799 hobo 1 2934 30 156 '22-8 61.37 14.1 2.0 intron Octbeta2R - chr3R_30_12570001 chr3R_12570001 0.73 RAL-361 509 chr3R 12720134 12720293 roo 8677 400 13 159 '8-5 65.70 12.6 1.0 intron Men - chr3R_13_12720001 chr3R_12720001 0.62 RAL-361 510 chr3R 12831952 12832005 I-element 5349 5296 9 53 '4-5 61.16 21.4 0.4 intergenic not near genes chr3R_9_12830001 chr3R_12830001 0.44 RAL-361 511 chr3R 12899172 12899232 jockey 79 18 9 60 '2-7 69.87 19.6 0.4 intergenic not near genes chr3R_9_12895001 chr3R_12895001 0.22 RAL-361 512 chr3R 12929763 12929931 HMS-Beagle2 308 6893 29 168 '16-13 67.05 12.3 2.2 intron beat-Vb + chr3R_29_12925001 chr3R_12925001 0.55 RAL-361 513 chr3R 12946078 12946121 BS 20 63 10 43 '5-5 63.22 22.7 0.4 intergenic not near genes chr3R_10_12945001 chr3R_12945001 0.50 RAL-361 514 chr3R 13186815 13186879 I-element 5346 5282 18 64 '9-9 65.01 18.7 0.9 intergenic CG8508 - chr3R_18_13185001 chr3R_13185001 0.50 RAL-361 515 chr3R 13239894 13239954 BS 65 5 10 60 '5-5 68.80 19.3 0.5 intron Ace - chr3R_10_13235001 chr3R_13235001 0.50 RAL-361 516 chr3R 13438494 13438658 I-element 1 5347 27 164 '16-11 70.02 11.8 2.1 intergenic CR42756 - chr3R_27_13435001 chr3R_13435001 0.59 RAL-361 517 chr3R 13456304 13456470 pogo 9 2092 33 166 '17-16 64.59 14.6 2.1 intron,intron CG14372 +,CR17025 - chr3R_33_13455001 chr3R_13455001 0.52 RAL-361 518 chr3R 13508837 13508995 mdg1 7045 7443 30 158 '9-21 66.43 11.0 2.5 intergenic not near genes chr3R_30_13505001 chr3R_13505001 0.30 RAL-361 519 chr3R 13583223 13583294 jockey 4699 4678 13 71 '9-4 66.43 13.6 0.9 intergenic not near genes chr3R_13_13580001 chr3R_13580001 0.69 RAL-361 520 chr3R 13584169 13584330 roo 398 9 16 161 '8-8 69.60 13.7 1.1 intergenic not near genes chr3R_16_13580001 chr3R_13580001 0.50 RAL-361 521 chr3R 13826493 13826642 ZAM 6 8410 17 149 '10-7 64.28 9.6 1.6 intergenic not near genes chr3R_17_13825001 chr3R_13825001 0.59 RAL-361 522 chr3R 14038058 14038212 Juan 4209 4025 37 154 '21-16 60.71 14.1 2.5 intergenic not near genes chr3R_37_14035001 chr3R_14035001 0.57 RAL-361 523 chr3R 14057156 14057305 P-element 19 10 29 149 '15-14 45.68 16.3 1.7 intron foxo + chr3R_29_14055001 chr3R_14055001 0.52 RAL-361 524 chr3R 14438598 14438742 Tirant 8139 394 32 144 '10-22 66.71 11.8 2.5 intron cv-c - chr3R_32_14435001 chr3R_14435001 0.31 RAL-361 525 chr3R 14457868 14458005 1360 3380 3370 16 137 '11-5 55.95 12.7 1.2 intron cv-c - chr3R_16_14455001 chr3R_14455001 0.69 RAL-361 526 chr3R 14574885 14575049 P-element 9 5 35 164 '20-15 45.47 13.1 2.5 5` UTR CG7987 - chr3R_35_14570001 chr3R_14570001 0.57 RAL-361 527 chr3R 14684688 14684835 flea 4995 4771 15 147 '6-9 61.60 14.9 0.9 intron Meltrin - chr3R_15_14680001 chr3R_14680001 0.40 RAL-361 528 chr3R 14688206 14688370 pogo 2083 3 31 164 '13-18 61.92 9.5 3.0 intron Meltrin - chr3R_31_14685001 chr3R_14685001 0.42 RAL-361 529 chr3R 14688448 14688592 FB 12 29 15 144 '10-5 64.66 13.0 1.1 intron Meltrin - chr3R_15_14685001 chr3R_14685001 0.67 RAL-361 530 chr3R 14696752 14696909 I-element 5343 5132 31 157 '17-14 64.19 15.3 1.9 5` UTR Meltrin - chr3R_31_14695001 chr3R_14695001 0.55 RAL-361 531 chr3R 14767705 14767855 roo 8681 406 19 150 '8-11 62.86 14.6 1.2 intron jvl + chr3R_19_14765001 chr3R_14765001 0.42 RAL-361 532 chr3R 14777058 14777231 roo 8669 408 39 173 '22-17 67.98 9.7 3.6 intron jvl + chr3R_39_14775001 chr3R_14775001 0.56 RAL-361 533 chr3R 14801300 14801451 mdg1 7440 7049 12 151 '6-6 58.93 14.4 0.8 intergenic CG14856 +,CG14857 + chr3R_12_14800001 chr3R_14800001 0.50 RAL-361 534 chr3R 14867136 14867301 roo 6 399 14 165 '7-7 65.34 14.2 0.9 intron btsz - chr3R_14_14865001 chr3R_14865001 0.50 RAL-361 535 chr3R 14976489 14976692 mdg1 7077 7078 5 203 '2-3 72.80 7.0 0.6 intergenic not near genes chr3R_5_14975001 chr3R_14975001 0.40 RAL-361 536 chr3R 14986161 14986226 jockey 12 78 17 65 '8-9 67.31 17.9 0.9 intergenic not near genes chr3R_17_14985001 chr3R_14985001 0.47 RAL-361 537 chr3R 15502553 15502594 Ivk 5324 5365 15 41 '6-9 66.03 24.6 0.6 intergenic not near genes chr3R_15_15500001 chr3R_15500001 0.40 RAL-361 538 chr3R 15574753 15574891 Transpac 35 5223 34 138 '17-17 67.80 12.6 2.5 intergenic not near genes chr3R_34_15570001 chr3R_15570001 0.50 RAL-361 539 chr3R 15667229 15667392 Tirant 387 8116 17 163 '15-2 65.38 16.9 0.9 intron pxb + chr3R_17_15665001 chr3R_15665001 0.88 RAL-361 540 chr3R 15768175 15768368 Stalker3T 207 199 5 193 '4-1 66.56 11.1 0.4 intergenic not near genes chr3R_5_15765001 chr3R_15765001 0.80 RAL-361 541 chr3R 15790061 15790125 flea 4751 4709 30 64 '16-14 67.61 30.5 1.0 exon c(3)G - chr3R_30_15790001 chr3R_15790001 0.53 RAL-361 542 chr3R 15863930 15864055 Burdock 6137 6332 12 125 '9-3 69.80 16.2 0.7 intron CG31183 - chr3R_12_15860001 chr3R_15860001 0.75 RAL-361 543 chr3R 15885620 15885781 HMS-Beagle 6806 235 22 161 '13-9 65.96 19.2 1.1 intergenic not near genes chr3R_22_15885001 chr3R_15885001 0.59 RAL-361 544 chr3R 15943251 15943388 BS 4879 5084 25 137 '8-17 62.91 18.4 1.3 intron Sap47 + chr3R_25_15940001 chr3R_15940001 0.32 RAL-361 545 chr3R 16020011 16020148 pogo 28 2082 19 137 '7-12 63.14 17.2 1.0 intergenic not near genes chr3R_19_16020001 chr3R_16020001 0.37 RAL-361 546 chr3R 16041016 16041082 jockey 77 10 16 66 '9-7 69.71 13.2 1.1 3` UTR pnr + chr3R_16_16040001 chr3R_16040001 0.56 RAL-361 547 chr3R 16111761 16111824 Juan 4145 4208 9 63 '4-5 63.82 11.6 0.7 intergenic not near genes chr3R_9_16110001 chr3R_16110001 0.44 RAL-361 548 chr3R 16134009 16134181 pogo 1 2092 17 172 '11-6 66.27 12.3 1.3 intron Sb + chr3R_17_16130001 chr3R_16130001 0.65 RAL-361 549 chr3R 16275723 16275857 copia 5084 4875 20 134 '4-16 68.88 17.7 1.1 intron gish + chr3R_20_16275001 chr3R_16275001 0.20 RAL-361 550 chr3R 16396459 16396513 roo 9008 409 11 54 '7-4 66.59 25.6 0.4 intron ss - chr3R_11_16395001 chr3R_16395001 0.64 RAL-361 551 chr3R 16425360 16425522 roo 8667 394 28 162 '13-15 66.82 7.4 3.3 intergenic not near genes chr3R_28_16425001 chr3R_16425001 0.46 RAL-361 552 chr3R 16502541 16502688 297 6963 6604 28 147 '13-15 64.80 14.0 1.9 intergenic CG42342 + chr3R_28_16500001 chr3R_16500001 0.46 RAL-361 553 chr3R 16563947 16564112 roo 402 9 21 165 '12-9 64.61 15.7 1.3 intron CG42342 + chr3R_21_16560001 chr3R_16560001 0.57 RAL-361 554 chr3R 16799775 16799834 X-element 4688 4628 6 59 '4-2 58.75 23.8 0.2 intergenic not near genes chr3R_6_16795001 chr3R_16795001 0.67 RAL-361 555 chr3R 16860639 16860704 Doc 8 73 18 65 '5-13 65.91 21.6 0.8 intron iab-8 - chr3R_18_16860001 chr3R_16860001 0.28 RAL-361 556 chr3R 17012720 17012872 roo 396 8680 31 152 '20-11 63.68 15.3 1.9 intergenic CG8907 + chr3R_31_17010001 chr3R_17010001 0.65 RAL-361 557 chr3R 17271923 17272063 hopper 1399 25 13 140 '7-6 67.23 11.0 1.1 intergenic not near genes chr3R_13_17270001 chr3R_17270001 0.54 RAL-361 558 chr3R 17283427 17283651 mdg1 7041 7428 27 224 '8-19 64.89 12.6 2.0 intergenic CG31418 + chr3R_27_17280001 chr3R_17280001 0.30 RAL-361 559 chr3R 17330228 17330388 roo 16 404 19 160 '8-11 67.75 10.8 1.6 intron beat-IIa - chr3R_19_17330001 chr3R_17330001 0.42 RAL-361 560 chr3R 17427990 17428146 FB 6 5 28 156 '16-12 64.18 13.0 2.0 intron CG5873 + chr3R_28_17425001 chr3R_17425001 0.57 RAL-361 561 chr3R 17615054 17615206 mdg1 7071 34 4 152 '1-3 66.60 12.4 0.3 intergenic CG14327 + chr3R_4_17615001 chr3R_17615001 0.25 RAL-361 562 chr3R 17644729 17644915 P-element 2883 109 52 186 '25-27 54.66 18.3 2.7 intron CG43175 + chr3R_52_17640001 chr3R_17640001 0.48 RAL-361 563 chr3R 17958933 17959079 412 7536 7078 20 146 '11-9 62.95 13.8 1.4 intron cpo + chr3R_20_17955001 chr3R_17955001 0.55 RAL-361 564 chr3R 18053488 18053557 jockey 4750 4681 15 69 '6-9 64.22 16.8 0.8 intergenic not near genes chr3R_15_18050001 chr3R_18050001 0.40 RAL-361 565 chr3R 18084679 18084838 297 377 6587 19 159 '2-17 68.99 12.0 1.5 intergenic not near genes chr3R_19_18080001 chr3R_18080001 0.11 RAL-361 566 chr3R 18104963 18105150 TART-B 10508 10510 4 187 '1-3 63.20 10.0 0.4 intron sr + chr3R_4_18100001 chr3R_18100001 0.25 RAL-361 567 chr3R 18121690 18121761 P-element 9 80 13 71 '6-7 47.05 22.1 0.6 intron sr + chr3R_13_18120001 chr3R_18120001 0.46 RAL-361 568 chr3R 18276836 18276992 1360 21 3387 16 156 '5-11 69.76 15.6 1.0 intron eIF-1A + chr3R_16_18275001 chr3R_18275001 0.31 RAL-361 569 chr3R 18297218 18297373 rover 328 6969 12 155 '7-5 63.25 4.2 2.3 intron l(3)05822 - chr3R_12_18295001 chr3R_18295001 0.58 RAL-361 570 chr3R 18321774 18321916 roo 8690 396 5 142 '3-2 73.33 18.8 0.3 intron CG31235 - chr3R_5_18320001 chr3R_18320001 0.60 RAL-361 571 chr3R 18530044 18530098 1360 3 3377 10 54 '5-5 61.21 17.2 0.5 intron fru - chr3R_10_18530001 chr3R_18530001 0.50 RAL-361 572 chr3R 18558999 18559164 hobo 2934 7 20 165 '6-14 67.07 13.2 1.4 intergenic not near genes chr3R_20_18555001 chr3R_18555001 0.30 RAL-361 573 chr3R 18618013 18618174 412 12 485 43 161 '26-17 67.00 15.6 2.6 intron,intron qin +,CG14304 - chr3R_43_18615001 chr3R_18615001 0.60 RAL-361 574 chr3R 18780650 18780814 roo 7 399 43 164 '19-24 65.40 12.4 3.2 intron CG7720 - chr3R_43_18780001 chr3R_18780001 0.44 RAL-361 575 chr3R 18828276 18828438 roo 8667 393 22 162 '15-7 63.94 11.1 1.8 intron CG18208 - chr3R_22_18825001 chr3R_18825001 0.68 RAL-361 576 chr3R 18860646 18860811 flea 4995 4755 14 165 '7-7 69.64 7.8 1.6 intergenic not near genes chr3R_14_18860001 chr3R_18860001 0.50 RAL-361 577 chr3R 18879799 18879970 roo 399 8664 26 171 '12-14 62.43 14.9 1.6 intergenic not near genes chr3R_26_18875001 chr3R_18875001 0.46 RAL-361 578 chr3R 19127688 19127852 1360 3381 3381 20 164 '10-10 57.59 16.0 1.2 intron CG6040 + chr3R_20_19125001 chr3R_19125001 0.50 RAL-361 579 chr3R 19352865 19352971 roo 57 390 21 106 '5-16 65.14 11.4 1.7 intergenic not near genes chr3R_21_19350001 chr3R_19350001 0.24 RAL-361 580 chr3R 19500209 19500357 3S18 296 3 16 148 '2-14 65.95 9.2 1.6 intron Dys + chr3R_16_19500001 chr3R_19500001 0.12 RAL-361 581 chr3R 19724935 19725100 copia 4880 251 28 165 '8-20 66.40 13.7 1.9 intergenic not near genes chr3R_28_19720001 chr3R_19720001 0.29 RAL-361 582 chr3R 19836615 19836776 P-element 2880 10 36 161 '15-21 44.45 12.8 2.6 5` UTR bnl - chr3R_36_19835001 chr3R_19835001 0.42 RAL-361 583 chr3R 19897956 19898124 roo 7 403 22 168 '10-12 70.07 16.2 1.3 exon,intron CG4733 +,CG4538 - chr3R_22_19895001 chr3R_19895001 0.45 RAL-361 584 chr3R 19930485 19930654 BS 5062 5085 13 169 '6-7 56.71 13.7 0.9 exon Hs6st - chr3R_13_19930001 chr3R_19930001 0.46 RAL-361 585 chr3R 19968165 19968301 1360 3361 15 17 136 '7-10 67.68 15.4 1.0 intron Hs6st - chr3R_17_19965001 chr3R_19965001 0.41 RAL-361 586 chr3R 19982271 19982396 hobo 44 2930 23 125 '8-15 66.40 10.0 2.1 intron Hs6st - chr3R_23_19980001 chr3R_19980001 0.35 RAL-361 587 chr3R 20184375 20184545 roo 403 8669 20 170 '10-10 66.70 14.8 1.3 intergenic not near genes chr3R_20_20180001 chr3R_20180001 0.50 RAL-361 588 chr3R 20205448 20205504 jockey 4776 4832 13 56 '5-8 65.19 15.5 0.8 intron Nlg4 + chr3R_13_20205001 chr3R_20205001 0.38 RAL-361 589 chr3R 20228801 20228954 3S18 2 315 21 153 '12-9 63.23 8.2 2.3 intron Nlg4 + chr3R_21_20225001 chr3R_20225001 0.57 RAL-361 590 chr3R 20242440 20242608 Tabor 480 8 24 168 '11-13 64.26 16.5 1.4 intron Nlg4 + chr3R_24_20240001 chr3R_20240001 0.46 RAL-361 591 chr3R 20402857 20403013 rover 16 337 12 156 '7-5 65.60 15.2 0.7 intron Gfrl - chr3R_12_20400001 chr3R_20400001 0.58 RAL-361 592 chr3R 20422741 20422808 Doc 77 10 24 67 '9-15 65.13 18.1 1.3 intron Gfrl - chr3R_24_20420001 chr3R_20420001 0.38 RAL-361 593 chr3R 20732582 20732752 mdg1 7458 10 24 170 '12-12 69.13 7.5 2.8 3` UTR CG31205 + chr3R_24_20730001 chr3R_20730001 0.50 RAL-361 594 chr3R 20743347 20743506 roo 13 400 30 159 '14-16 64.40 11.7 2.4 intron,exon CG42322 +,CG31199 - chr3R_30_20740001 chr3R_20740001 0.47 RAL-361 595 chr3R 20840204 20840255 jockey 82 30 5 51 '3-2 65.28 19.6 0.2 intergenic Synd + chr3R_5_20840001 chr3R_20840001 0.60 RAL-361 596 chr3R 20901643 20901799 Ivk 18 5373 34 156 '15-19 63.83 14.2 2.2 intergenic CG5621 + chr3R_34_20900001 chr3R_20900001 0.44 RAL-361 597 chr3R 21152024 21152180 S-element 34 1715 13 156 '6-7 62.04 5.3 2.1 intron SNF4Agamma + chr3R_13_21150001 chr3R_21150001 0.46 RAL-361 598 chr3R 21318022 21318196 Tirant 8499 8109 17 174 '15-2 66.89 12.4 1.3 intergenic Hsromega +,CG16791 - chr3R_17_21315001 chr3R_21315001 0.88 RAL-361 599 chr3R 21408387 21408548 1360 10 4 16 161 '7-9 65.70 7.6 1.9 intergenic CheB93a + chr3R_16_21405001 chr3R_21405001 0.44 RAL-361 600 chr3R 21437585 21437734 1360 3387 3386 18 149 '12-6 68.58 17.0 1.0 intergenic not near genes chr3R_18_21435001 chr3R_21435001 0.67 RAL-361 601 chr3R 21614442 21614552 hopper 9 26 22 110 '16-6 66.04 14.8 1.4 intron InR - chr3R_22_21610001 chr3R_21610001 0.73 RAL-361 602 chr3R 21633674 21633826 P-element 15 2876 23 152 '13-10 49.83 12.7 1.7 intron E2f - chr3R_23_21630001 chr3R_21630001 0.57 RAL-361 603 chr3R 21812993 21813158 HMS-Beagle 7036 9 24 165 '8-16 62.81 10.4 2.1 intron CASK - chr3R_24_21810001 chr3R_21810001 0.33 RAL-361 604 chr3R 21968116 21968284 Stalker2 405 14 20 168 '9-11 65.12 12.8 1.4 intron Eip93F + chr3R_20_21965001 chr3R_21965001 0.45 RAL-361 605 chr3R 21997136 21997207 blood 7044 3 16 71 '10-6 65.71 6.4 2.2 intron Eip93F + chr3R_16_21995001 chr3R_21995001 0.62 RAL-361 606 chr3R 22182555 22182612 F-element 66 10 12 57 '4-8 55.79 20.0 0.6 intron SKIP + chr3R_12_22180001 chr3R_22180001 0.33 RAL-361 607 chr3R 22341184 22341254 jockey 5 79 15 70 '5-10 66.64 18.0 0.8 intergenic CG5386 - chr3R_15_22340001 chr3R_22340001 0.33 RAL-361 608 chr3R 22469823 22470000 Burdock 1 251 22 177 '17-5 67.03 16.2 1.3 5` UTR Nrx-1 + chr3R_22_22465001 chr3R_22465001 0.77 RAL-361 609 chr3R 22494051 22494229 297 394 6585 23 178 '9-14 66.00 13.9 1.5 intergenic CG7046 + chr3R_23_22490001 chr3R_22490001 0.39 RAL-361 610 chr3R 22762846 22763012 P-element 2882 2881 17 166 '7-10 54.10 20.4 0.8 intron,intron,exon CG7029 +,Usp12-46 +,CG4723 - chr3R_17_22760001 chr3R_22760001 0.41 RAL-361 611 chr3R 22802132 22802280 flea 4988 4764 26 148 '9-17 66.16 16.2 1.5 intergenic not near genes chr3R_26_22800001 chr3R_22800001 0.35 RAL-361 612 chr3R 22841034 22841181 Quasimodo 7358 1 7 147 '3-4 61.19 12.4 0.5 intergenic not near genes chr3R_7_22840001 chr3R_22840001 0.43 RAL-361 613 chr3R 22910675 22910836 Transpac 306 17 30 161 '15-15 66.12 12.5 2.2 intron klg + chr3R_30_22910001 chr3R_22910001 0.50 RAL-361 614 chr3R 23020792 23021007 INE-1 575 557 20 215 '9-11 51.76 5.8 2.9 intergenic lmd - chr3R_20_23020001 chr3R_23020001 0.45 RAL-361 615 chr3R 23181481 23181540 HMS-Beagle 67 8 10 59 '5-5 65.36 16.2 0.6 intron Irk1 + chr3R_10_23180001 chr3R_23180001 0.50 RAL-361 616 chr3R 23230580 23230723 pogo 8 2096 36 143 '20-16 56.65 18.4 1.9 exon CG4467 - chr3R_36_23230001 chr3R_23230001 0.56 RAL-361 617 chr3R 23235228 23235613 jockey 4986 4753 21 385 '10-11 63.73 8.4 2.2 intron CG4467 - chr3R_21_23235001 chr3R_23235001 0.48 RAL-361 618 chr3R 23465757 23465922 roo 9061 5 49 165 '21-28 66.59 14.9 3.1 intron CG4374 - chr3R_49_23465001 chr3R_23465001 0.43 RAL-361 619 chr3R 23526179 23526297 F-element 172 247 23 118 '8-15 61.21 13.5 1.6 intron CG10175 - chr3R_23_23525001 chr3R_23525001 0.35 RAL-361 620 chr3R 23572240 23572402 mdg1 7049 7451 16 162 '9-7 63.20 11.2 1.3 intron beat-IV + chr3R_16_23570001 chr3R_23570001 0.56 RAL-361 621 chr3R 23678576 23678740 1360 4 3378 41 164 '22-19 65.64 9.2 4.0 intergenic CG13822 +,CG10157 + chr3R_41_23675001 chr3R_23675001 0.54 RAL-361 622 chr3R 24465350 24465497 roo 9049 8662 17 147 '8-9 62.06 15.6 1.0 intergenic not near genes chr3R_17_24465001 chr3R_24465001 0.47 RAL-361 623 chr3R 24582469 24582628 S-element 1705 1702 12 159 '6-6 67.09 17.2 0.7 intron CG13624 - chr3R_12_24580001 chr3R_24580001 0.50 RAL-361 624 chr3R 24688469 24688614 roo 9055 8683 22 145 '17-5 64.91 14.7 1.4 intron slo + chr3R_22_24685001 chr3R_24685001 0.77 RAL-361 625 chr3R 24688693 24688750 412 7121 11 11 57 '6-5 65.89 19.4 0.5 intron slo + chr3R_11_24685001 chr3R_24685001 0.55 RAL-361 626 chr3R 24745877 24746255 1360 3383 3387 11 378 '9-2 65.56 15.5 0.7 exon tok + chr3R_11_24745001 chr3R_24745001 0.82 RAL-361 627 chr3R 24749006 24749152 roo 8663 9043 17 146 '9-8 62.87 21.9 0.7 3` UTR tok + chr3R_17_24745001 chr3R_24745001 0.53 RAL-361 628 chr3R 24750937 24750994 G6 17 58 6 57 '4-2 66.02 33.8 0.2 exon tld + chr3R_6_24750001 chr3R_24750001 0.67 RAL-361 629 chr3R 24760497 24760663 pogo 2095 12 41 166 '28-13 68.97 15.9 2.4 3` UTR asp + chr3R_41_24760001 chr3R_24760001 0.68 RAL-361 630 chr3R 25055865 25056030 S-element 1706 1707 12 165 '3-9 67.83 16.1 0.7 exon CG31111 - chr3R_12_25055001 chr3R_25055001 0.25 RAL-361 631 chr3R 25316223 25316382 297 373 3 10 159 '3-7 63.52 16.2 0.6 intergenic CG10559 -,CG10553 - chr3R_10_25315001 chr3R_25315001 0.30 RAL-361 632 chr3R 25373466 25373618 17.6 6948 7412 12 152 '6-6 68.80 17.1 0.7 intron Fur1 - chr3R_12_25370001 chr3R_25370001 0.50 RAL-361 633 chr3R 25378623 25378686 jockey 4625 4562 18 63 '13-5 63.49 9.0 1.8 intron Fur1 - chr3R_18_25375001 chr3R_25375001 0.72 RAL-361 634 chr3R 25379423 25379624 roo 52 400 20 201 '14-6 70.19 14.2 1.3 intron Fur1 - chr3R_20_25375001 chr3R_25375001 0.70 RAL-361 635 chr3R 25433075 25433232 pogo 19 2093 21 157 '5-16 66.57 15.0 1.3 intron Fur1 - chr3R_21_25430001 chr3R_25430001 0.24 RAL-361 636 chr3R 25434856 25435024 hobo 4 2933 31 168 '18-13 66.42 16.2 1.8 intron Fur1 - chr3R_31_25430001 chr3R_25430001 0.58 RAL-361 637 chr3R 25494755 25494916 17.6 7415 6944 7 161 '2-5 67.66 11.8 0.5 intron CG33494 - chr3R_7_25490001 chr3R_25490001 0.29 RAL-361 638 chr3R 25512317 25512463 hobo 26 2933 17 146 '6-11 65.00 6.7 2.2 intergenic not near genes chr3R_17_25510001 chr3R_25510001 0.35 RAL-361 639 chr3R 25559190 25559242 Doc 23 75 17 52 '10-7 68.29 21.0 0.8 intron msi + chr3R_17_25555001 chr3R_25555001 0.59 RAL-361 640 chr3R 25565970 25566130 hobo 3 2933 30 160 '15-15 62.52 13.9 2.0 intron msi + chr3R_30_25565001 chr3R_25565001 0.50 RAL-361 641 chr3R 25580976 25581146 pogo 17 2092 30 170 '14-16 62.13 9.1 3.0 intron msi + chr3R_30_25580001 chr3R_25580001 0.47 RAL-361 642 chr3R 25698454 25698564 jockey 4938 10 28 110 '17-11 70.98 15.6 1.7 intergenic LpR2 - chr3R_28_25695001 chr3R_25695001 0.61 RAL-361 643 chr3R 25821739 25821907 pogo 12 2097 27 168 '11-16 66.74 11.6 2.1 intergenic not near genes chr3R_27_25820001 chr3R_25820001 0.41 RAL-361 644 chr3R 25938100 25938166 roo 400 334 14 66 '5-9 69.01 16.3 0.8 intron CCAP-R - chr3R_14_25935001 chr3R_25935001 0.36 RAL-361 645 chr3R 25981900 25982063 hobo 2926 2 27 163 '11-16 65.84 13.7 1.8 3` UTR CG42261 + chr3R_27_25980001 chr3R_25980001 0.41 RAL-361 646 chr3R 26655601 26655664 jockey 4669 4742 15 63 '7-8 57.89 17.4 0.8 intron beat-VII - chr3R_15_26655001 chr3R_26655001 0.47 RAL-361 647 chr3R 26766627 26766782 roo 395 12 31 155 '18-13 62.07 12.2 2.3 intergenic not near genes chr3R_31_26765001 chr3R_26765001 0.58 RAL-361 648 chr3R 26792561 26792698 Burdock 246 30 20 137 '11-9 65.30 14.1 1.3 intergenic not near genes chr3R_20_26790001 chr3R_26790001 0.55 RAL-361 649 chr3R 27055849 27056000 roo 8687 402 39 151 '12-27 67.08 9.1 3.9 intron RYa-R + chr3R_39_27055001 chr3R_27055001 0.31 RAL-361 650 chr3R 27082921 27082982 jockey 4835 4774 28 61 '13-15 64.03 18.2 1.5 intergenic CG14257 +,Cpr97Ea - chr3R_28_27080001 chr3R_27080001 0.46 RAL-361 651 chr3R 27420882 27421042 Stalker2 395 7261 27 160 '10-17 65.42 12.2 2.0 intron side - chr3R_27_27420001 chr3R_27420001 0.37 RAL-361 652 chr3R 27606017 27606187 pogo 2092 3 29 170 '17-12 63.50 16.3 1.7 intron dsd - chr3R_29_27605001 chr3R_27605001 0.59 RAL-361 653 chr3R 27644908 27645075 roo 397 3 24 167 '11-13 67.35 18.2 1.2 intron tau - chr3R_24_27640001 chr3R_27640001 0.46 RAL-361 654 chr3R 27782419 27782570 pogo 2072 4 30 151 '13-17 66.91 12.5 2.2 intron CG34353 - chr3R_30_27780001 chr3R_27780001 0.43 RAL-361 655 chr3R 27898177 27898350 roo 8670 406 32 173 '15-17 66.95 12.1 2.4 intron CG34353 - chr3R_32_27895001 chr3R_27895001 0.47 RAL-361 656 chr3R 28003389 28003550 copia 11 254 14 161 '1-13 69.57 12.5 1.0 intergenic not near genes chr3R_14_28000001 chr3R_28000001 0.07 RAL-361 657 chr3R 28145226 28145370 roo 396 14 18 144 '7-11 63.05 14.2 1.2 intergenic not near genes chr3R_18_28145001 chr3R_28145001 0.39 RAL-361 658 chr3R 28206008 28206183 Transpac 4 307 29 175 '18-11 67.14 11.9 2.2 intron CG34354 + chr3R_29_28205001 chr3R_28205001 0.62 RAL-361 659 chr3R 28411923 28412069 roo 6 9043 38 146 '18-20 67.41 14.2 2.5 intergenic not near genes chr3R_38_28410001 chr3R_28410001 0.47 RAL-361 660 chr3R 28669544 28669704 roo 8667 391 20 160 '9-11 67.75 13.4 1.4 exon CG33346 + chr3R_20_28665001 chr3R_28665001 0.45 RAL-361 661 chr3R 28786214 28786377 412 6 481 33 163 '21-12 64.89 11.3 2.7 intergenic not near genes chr3R_33_28785001 chr3R_28785001 0.64 RAL-361 662 chr3R 29200040 29200212 S-element 6 6 12 172 '5-7 64.89 13.2 0.8 intergenic CG11899 + chr3R_12_29200001 chr3R_29200001 0.42 RAL-361 663 chr3R 29446968 29447132 297 6 6965 14 164 '10-4 68.70 10.2 1.2 intron Ptp99A + chr3R_14_29445001 chr3R_29445001 0.71 RAL-361 664 chr3R 29540383 29540557 I-element 5349 71 32 174 '10-22 64.64 12.6 2.4 intergenic not near genes chr3R_32_29540001 chr3R_29540001 0.31 RAL-361 665 chr3R 29604647 29604817 hopper 8 1412 37 170 '22-15 64.50 13.3 2.6 intron alph + chr3R_37_29600001 chr3R_29600001 0.59 RAL-361 666 chr3R 29958017 29958182 opus 8 489 25 165 '10-15 63.69 14.2 1.6 intron TkR99D - chr3R_25_29955001 chr3R_29955001 0.40 RAL-361 667 chr3R 29975363 29975551 roo 8664 397 34 188 '15-19 64.82 13.3 2.4 intergenic not near genes chr3R_34_29975001 chr3R_29975001 0.44 RAL-361 668 chr3R 30032099 30032256 I-element 8 5347 33 157 '26-7 59.46 7.6 3.8 exon Axn + chr3R_33_30030001 chr3R_30030001 0.79 RAL-361 669 chr3R 30091605 30091753 copia 25 248 39 148 '20-19 64.38 12.9 2.8 intron sima + chr3R_39_30090001 chr3R_30090001 0.51 RAL-361 670 chr3R 30247413 30247564 I-element 5343 6 22 151 '11-11 62.24 8.9 2.2 intergenic not near genes chr3R_22_30245001 chr3R_30245001 0.50 RAL-361 671 chr3R 30483566 30483610 jockey 4679 4724 13 44 '7-6 59.43 21.6 0.6 intron PH4alphaEFB + chr3R_13_30480001 chr3R_30480001 0.54 RAL-361 672 chr3R 30765776 30765929 P-element 2875 13 23 153 '10-13 47.47 13.8 1.6 intergenic zfh1 + chr3R_23_30765001 chr3R_30765001 0.43 RAL-361 673 chr3R 30815516 30815681 I-element 5341 5 6 165 '5-1 59.87 12.6 0.4 intron cindr + chr3R_6_30815001 chr3R_30815001 0.83 RAL-361 674 chr3R 30950624 30950789 roo 400 8668 34 165 '19-15 68.51 12.5 2.5 intergenic not near genes chr3R_34_30950001 chr3R_30950001 0.56 RAL-361 675 chr3R 31146659 31146706 jockey 64 16 7 47 '2-5 68.36 20.7 0.3 intron Gycbeta100B + chr3R_7_31145001 chr3R_31145001 0.29 RAL-361 676 chr3R 31260689 31260847 mdg3 5255 5482 44 158 '25-19 64.59 14.4 2.9 exon CG18672 + chr3R_44_31260001 chr3R_31260001 0.57 RAL-361 677 chr3R 31270029 31270193 412 7068 7544 39 164 '24-15 65.76 12.6 2.9 intergenic not near genes chr3R_39_31270001 chr3R_31270001 0.62 RAL-361 678 chr3R 31374148 31374319 opus 7495 5 49 171 '29-20 68.52 12.6 3.6 3` UTR gskt + chr3R_49_31370001 chr3R_31370001 0.59 RAL-361 679 chr3R 31391289 31391463 opus 7499 10 47 174 '26-21 64.25 13.3 3.3 3` UTR CG1607 + chr3R_47_31390001 chr3R_31390001 0.55 RAL-361 680 chr3R 31947889 31948103 412 7086 7533 34 214 '14-20 64.69 8.4 3.6 intron heph - chr3R_34_31945001 chr3R_31945001 0.41 RAL-361 681 chr3R 32045286 32045452 roo 7 401 45 166 '24-21 66.37 13.1 3.2 intergenic krz - chr3R_45_32045001 chr3R_32045001 0.53 RAL-361 682 chr4 687178 687222 opus 7486 439 17 44 '8-9 66.39 14.6 1.1 3` UTR CG11360 + chr4_17_685001 chr4_685001 0.47 RAL-361 683 chr4 1023617 1023680 297 2 6627 21 63 '16-5 68.23 12.5 1.6 5` UTR PlexA - chr4_21_1020001 chr4_1020001 0.76 RAL-361 684 chrX 686255 686421 Tirant 8119 393 43 166 '20-23 63.06 9.4 4.1 intergenic not near genes chrX_43_685001 chrX_685001 0.47 RAL-361 685 chrX 827217 827383 roo 8670 9063 48 166 '23-25 64.60 11.6 3.8 intron CG43867 - chrX_48_825001 chrX_825001 0.48 RAL-361 686 chrX 858267 858427 I-element 5347 4 44 160 '12-32 66.09 10.8 3.7 intron CG43867 - chrX_44_855001 chrX_855001 0.27 RAL-361 687 chrX 1197888 1197937 jockey 4524 4573 19 49 '7-12 62.21 12.5 1.4 intergenic not near genes chrX_19_1195001 chrX_1195001 0.37 RAL-361 688 chrX 1903953 1904109 S-element 1699 1705 24 156 '13-11 68.83 11.5 1.9 3` UTR Edem1 - chrX_24_1900001 chrX_1900001 0.54 RAL-361 689 chrX 1949462 1949629 S-element 1707 1708 25 167 '11-14 67.20 12.4 1.9 intron Hr4 + chrX_25_1945001 chrX_1945001 0.44 RAL-361 690 chrX 2507802 2507976 Burdock 6138 245 31 174 '15-16 64.49 7.2 3.8 intron trol - chrX_31_2505001 chrX_2505001 0.48 RAL-361 691 chrX 2511845 2512009 hobo 2930 5 42 164 '28-14 63.76 9.0 4.2 intron trol - chrX_42_2510001 chrX_2510001 0.67 RAL-361 692 chrX 2554589 2554744 pogo 2082 10 43 155 '20-23 65.49 8.0 4.8 intron Pdfr + chrX_43_2550001 chrX_2550001 0.47 RAL-361 693 chrX 2867446 2867596 flea 5007 4769 35 150 '22-13 66.52 8.4 3.7 intron kirre + chrX_35_2865001 chrX_2865001 0.63 RAL-361 694 chrX 3205263 3205427 297 6 6963 28 164 '14-14 66.33 8.7 2.9 intron dnc + chrX_28_3205001 chrX_3205001 0.50 RAL-361 695 chrX 3282566 3282736 pogo 3 2090 22 170 '20-2 67.35 6.3 3.0 intron dnc + chrX_22_3280001 chrX_3280001 0.91 RAL-361 696 chrX 3556231 3556392 mdg1 7050 7451 29 161 '9-20 65.51 7.3 3.5 intron CG32791 - chrX_29_3555001 chrX_3555001 0.31 RAL-361 697 chrX 3629459 3629621 flea 240 4761 29 162 '7-22 67.38 8.4 3.1 intron AstA-R1 + chrX_29_3625001 chrX_3625001 0.24 RAL-361 698 chrX 4292401 4292563 hopper 1404 1410 50 162 '29-21 63.47 9.6 4.7 intergenic not near genes chrX_50_4290001 chrX_4290001 0.58 RAL-361 699 chrX 4497549 4497623 F-element 447 491 16 74 '12-4 66.59 11.9 1.2 intron CR32773 - chrX_16_4495001 chrX_4495001 0.75 RAL-361 700 chrX 4672505 4672559 297 6910 6964 20 54 '12-8 66.77 13.3 1.4 intron rap - chrX_20_4670001 chrX_4670001 0.60 RAL-361 701 chrX 4738927 4739060 17.6 7375 5 22 133 '5-17 68.81 6.4 3.0 intergenic not near genes chrX_22_4735001 chrX_4735001 0.23 RAL-361 702 chrX 4749724 4749884 flea 4762 5000 33 160 '17-16 67.69 9.2 3.2 intergenic not near genes chrX_33_4745001 chrX_4745001 0.52 RAL-361 703 chrX 4757245 4757405 mdg1 7 7385 9 160 '8-1 69.33 6.3 1.2 intergenic not near genes chrX_9_4755001 chrX_4755001 0.89 RAL-361 704 chrX 5129453 5129587 rover 7274 20 9 134 '4-5 64.49 14.2 0.6 intron,intron CG15465 +,rg + chrX_9_5125001 chrX_5125001 0.44 RAL-361 705 chrX 5831301 5831464 297 378 3 32 163 '17-15 67.94 9.5 3.0 intron CG15765 + chrX_32_5830001 chrX_5830001 0.53 RAL-361 706 chrX 5965712 5965880 P-element 2 8 50 168 '25-25 48.08 8.0 5.6 intergenic not near genes chrX_50_5965001 chrX_5965001 0.50 RAL-361 707 chrX 6029743 6029905 pogo 2086 7 46 162 '16-30 65.57 12.2 3.5 intergenic not near genes chrX_46_6025001 chrX_6025001 0.35 RAL-361 708 chrX 6059650 6059813 roo 14 405 44 163 '19-25 67.60 11.0 3.7 intron CG5921 + chrX_44_6055001 chrX_6055001 0.43 RAL-361 709 chrX 6121132 6121301 pogo 12 2098 38 169 '16-22 65.20 8.5 4.0 intron Ca-alpha1T - chrX_38_6120001 chrX_6120001 0.42 RAL-361 710 chrX 6437713 6437823 412 7072 452 18 110 '7-11 61.77 6.4 2.4 intron CG42340 - chrX_18_6435001 chrX_6435001 0.39 RAL-361 711 chrX 6443654 6443841 297 5 395 27 187 '17-10 64.64 8.9 2.7 intron CG42340 - chrX_27_6440001 chrX_6440001 0.63 RAL-361 712 chrX 6484566 6484628 jockey 20 82 5 62 '1-4 70.15 10.9 0.4 intron CG42340 - chrX_5_6480001 chrX_6480001 0.20 RAL-361 713 chrX 6885985 6886080 Doc 70 60 21 95 '17-4 63.57 9.5 2.0 intergenic not near genes chrX_21_6885001 chrX_6885001 0.81 RAL-361 714 chrX 7061448 7061610 hobo 8 2931 32 162 '15-17 64.02 8.8 3.3 intron CG12541 - chrX_32_7060001 chrX_7060001 0.47 RAL-361 715 chrX 7066078 7066236 P-element 7 13 32 158 '15-17 48.40 6.5 4.3 intergenic CG12541 - chrX_32_7065001 chrX_7065001 0.47 RAL-361 716 chrX 7204955 7205111 P-element 14 8 55 156 '24-31 45.88 12.3 4.1 intron,intron CG9650 +,CR44357 - chrX_55_7200001 chrX_7200001 0.44 RAL-361 717 chrX 7534223 7534387 1360 3 3377 41 164 '22-19 67.26 9.0 4.1 intron CG32719 - chrX_41_7530001 chrX_7530001 0.54 RAL-361 718 chrX 7763348 7763496 hobo 24 2935 33 148 '16-17 61.35 6.0 4.7 intergenic not near genes chrX_33_7760001 chrX_7760001 0.48 RAL-361 719 chrX 7835279 7835442 copia 244 4875 29 163 '14-15 67.70 5.1 4.8 intron CG1402 + chrX_29_7835001 chrX_7835001 0.48 RAL-361 720 chrX 8027387 8027540 Juan 4206 9 22 153 '9-13 62.30 8.8 2.2 3` UTR Tbh + chrX_22_8025001 chrX_8025001 0.41 RAL-361 721 chrX 8038783 8038833 297 6640 6590 17 50 '11-6 62.59 21.6 0.8 3` UTR fs(1)h - chrX_17_8035001 chrX_8035001 0.65 RAL-361 722 chrX 8723008 8723066 Juan 4208 4150 20 58 '11-9 63.25 4.6 3.6 intergenic not near genes chrX_20_8720001 chrX_8720001 0.55 RAL-361 723 chrX 9272957 9273120 pogo 11 2091 55 163 '23-32 67.75 12.0 4.2 5` UTR Cfp1 - chrX_55_9270001 chrX_9270001 0.42 RAL-361 724 chrX 9433632 9433703 jockey 84 14 11 71 '7-4 70.64 5.9 1.6 intron mgl - chrX_11_9430001 chrX_9430001 0.64 RAL-361 725 chrX 9576484 9576644 FB 10 6 34 160 '14-20 69.03 10.0 3.1 intron CG32699 - chrX_34_9575001 chrX_9575001 0.41 RAL-361 726 chrX 9693465 9693618 pogo 2073 3 39 153 '16-23 65.18 6.7 5.1 intergenic not near genes chrX_39_9690001 chrX_9690001 0.41 RAL-361 727 chrX 10112889 10113029 FB 23 21 32 140 '19-13 62.26 4.3 6.0 intron RhoU + chrX_32_10110001 chrX_10110001 0.59 RAL-361 728 chrX 10252702 10252766 jockey 15 75 19 64 '8-11 69.10 14.1 1.3 intron Hk - chrX_19_10250001 chrX_10250001 0.42 RAL-361 729 chrX 10283146 10283215 F-element 90 159 17 69 '11-6 64.38 11.1 1.4 intron alpha-Man-I - chrX_17_10280001 chrX_10280001 0.65 RAL-361 730 chrX 10341895 10342062 412 7 7539 51 167 '28-23 61.72 10.4 4.5 intron CG43740 + chrX_51_10340001 chrX_10340001 0.55 RAL-361 731 chrX 10549693 10549744 jockey 4932 4983 13 51 '6-7 55.65 13.5 0.9 intron spri - chrX_13_10545001 chrX_10545001 0.46 RAL-361 732 chrX 10557545 10557704 I-element 6 5345 48 159 '29-19 67.32 8.9 4.8 intron spri - chrX_48_10555001 chrX_10555001 0.60 RAL-361 733 chrX 10759791 10759958 pogo 2095 11 44 167 '26-18 65.84 10.4 3.9 intergenic Tango5 - chrX_44_10755001 chrX_10755001 0.59 RAL-361 734 chrX 10980611 10980763 Transpac 294 12 35 152 '20-15 64.27 7.0 4.4 intron CG42339 - chrX_35_10980001 chrX_10980001 0.57 RAL-361 735 chrX 11042489 11042651 hopper 12 7 42 162 '17-25 63.64 7.2 5.1 intergenic not near genes chrX_42_11040001 chrX_11040001 0.40 RAL-361 736 chrX 11044362 11044526 roo 8674 402 35 164 '17-18 67.70 11.1 2.9 intergenic CG11160 + chrX_35_11040001 chrX_11040001 0.49 RAL-361 737 chrX 11213300 11213495 roo 9071 3 41 195 '25-16 57.94 5.6 6.2 intergenic not near genes chrX_41_11210001 chrX_11210001 0.61 RAL-361 738 chrX 11305929 11306092 roo 400 8673 39 163 '26-13 66.37 6.7 5.1 intergenic not near genes chrX_39_11305001 chrX_11305001 0.67 RAL-361 739 chrX 11320390 11320443 BS 6 59 20 53 '14-6 60.95 16.4 1.1 intergenic not near genes chrX_20_11320001 chrX_11320001 0.70 RAL-361 740 chrX 11716562 11716723 P-element 2879 2878 62 161 '34-28 45.90 12.4 4.6 3` UTR CR45618 - chrX_62_11715001 chrX_11715001 0.55 RAL-361 741 chrX 11828167 11828320 I-element 5347 8 38 153 '16-22 64.52 7.8 4.3 intron rudhira + chrX_38_11825001 chrX_11825001 0.42 RAL-361 742 chrX 12001817 12001981 pogo 7 2088 51 164 '22-29 65.73 10.3 4.5 intron fw - chrX_51_12000001 chrX_12000001 0.43 RAL-361 743 chrX 12080775 12080845 F-element 81 11 27 70 '14-13 66.10 10.2 2.4 intron,intron CR43960 +,Ten-a + chrX_27_12080001 chrX_12080001 0.52 RAL-361 744 chrX 12179325 12179384 Juan 4205 4146 19 59 '13-6 59.87 8.5 2.0 intron Ten-a + chrX_19_12175001 chrX_12175001 0.68 RAL-361 745 chrX 12278058 12278215 roo 397 8676 41 157 '23-18 69.34 5.4 6.4 intron Ten-a + chrX_41_12275001 chrX_12275001 0.56 RAL-361 746 chrX 12403864 12404027 blood 7379 7019 36 163 '15-21 66.00 8.9 3.6 intergenic not near genes chrX_36_12400001 chrX_12400001 0.42 RAL-361 747 chrX 12779541 12779705 297 13 6970 35 164 '20-15 67.60 10.6 3.0 intron CG32647 - chrX_35_12775001 chrX_12775001 0.57 RAL-361 748 chrX 12836282 12836346 Rt1a 5053 5016 16 64 '2-14 61.46 14.4 1.0 intron Pde9 - chrX_16_12835001 chrX_12835001 0.12 RAL-361 749 chrX 12866341 12866524 roo 1 409 29 183 '11-18 70.12 6.9 3.7 intron Pde9 - chrX_29_12865001 chrX_12865001 0.38 RAL-361 750 chrX 12981291 12981429 roo 396 8694 38 138 '21-17 67.33 7.9 4.3 intergenic not near genes chrX_38_12980001 chrX_12980001 0.55 RAL-361 751 chrX 13128098 13128242 1360 3367 13 35 144 '24-11 64.09 9.3 3.4 intron CG32638 - chrX_35_13125001 chrX_13125001 0.69 RAL-361 752 chrX 13134810 13134972 BS 5084 5004 52 162 '26-26 62.42 9.9 4.8 intergenic CG15717 +,MFS10 + chrX_52_13130001 chrX_13130001 0.50 RAL-361 753 chrX 14296889 14297070 Burdock 6136 6390 36 181 '23-13 65.23 6.9 4.6 intergenic not near genes chrX_36_14295001 chrX_14295001 0.64 RAL-361 754 chrX 14617690 14617755 jockey 4724 4686 31 65 '17-14 60.11 12.2 2.3 intron NetA - chrX_31_14615001 chrX_14615001 0.55 RAL-361 755 chrX 14900972 14901140 roo 8669 401 56 168 '20-36 66.82 9.7 5.2 intron Flo2 + chrX_56_14900001 chrX_14900001 0.36 RAL-361 756 chrX 14953339 14953497 1360 9 12 59 158 '25-34 66.00 10.4 5.2 intron,3` UTR pdgy -,CR44831 - chrX_59_14950001 chrX_14950001 0.42 RAL-361 757 chrX 14957296 14957362 jockey 76 9 12 66 '5-7 65.87 11.8 0.9 intron eag + chrX_12_14955001 chrX_14955001 0.42 RAL-361 758 chrX 14960593 14960769 hopper 1411 1414 41 176 '28-13 66.13 10.1 3.7 intron eag + chrX_41_14960001 chrX_14960001 0.68 RAL-361 759 chrX 15079006 15079095 P-element 2876 78 34 89 '19-15 47.05 4.5 6.2 3` UTR CR44662 - chrX_34_15075001 chrX_15075001 0.56 RAL-361 760 chrX 15232651 15232803 roo 8681 9059 36 152 '18-18 66.22 9.3 3.5 intergenic not near genes chrX_36_15230001 chrX_15230001 0.50 RAL-361 761 chrX 15555967 15556097 P-element 33 2872 28 130 '17-11 45.94 11.9 2.2 exon CG42300 - chrX_28_15555001 chrX_15555001 0.61 RAL-361 762 chrX 15635652 15635810 pogo 13 2088 22 158 '4-18 67.45 4.0 4.4 intergenic not near genes chrX_22_15635001 chrX_15635001 0.18 RAL-361 763 chrX 16089824 16089890 hobo 12 51 16 66 '6-10 67.10 1.1 7.6 intron Tob - chrX_16_16085001 chrX_16085001 0.38 RAL-361 764 chrX 16538672 16538831 flea 4768 246 18 159 '1-17 66.31 8.9 1.8 intergenic CG9903 - chrX_18_16535001 chrX_16535001 0.06 RAL-361 765 chrX 17063225 17063384 297 6591 381 41 159 '24-17 66.09 12.1 3.1 intron CG45002 - chrX_41_17060001 chrX_17060001 0.59 RAL-361 766 chrX 17710022 17710166 P-element 21 2876 52 144 '20-32 43.46 8.2 5.7 intergenic CG42684 +,CG8173 - chrX_52_17710001 chrX_17710001 0.38 RAL-361 767 chrX 18193678 18193848 hopper 1406 2 45 170 '20-25 64.52 8.5 4.7 intron Frq2 + chrX_45_18190001 chrX_18190001 0.44 RAL-361 768 chrX 18239321 18239370 jockey 24 74 13 49 '7-6 66.25 16.0 0.8 intergenic not near genes chrX_13_18235001 chrX_18235001 0.54 RAL-361 769 chrX 18471101 18471239 Juan 4199 4095 41 138 '19-22 61.57 8.9 4.1 intron CG32547 - chrX_41_18470001 chrX_18470001 0.46 RAL-361 770 chrX 18491181 18491347 Bari1 1704 16 41 166 '23-18 68.97 11.6 3.3 intergenic CG15044 - chrX_41_18490001 chrX_18490001 0.56 RAL-361 771 chrX 19048777 19048948 opus 6 7496 44 171 '20-24 67.08 9.0 4.4 intergenic not near genes chrX_44_19045001 chrX_19045001 0.45 RAL-361 772 chrX 19101474 19101637 297 6585 379 21 163 '14-7 68.50 7.7 2.4 intergenic not near genes chrX_21_19100001 chrX_19100001 0.67 RAL-361 773 chrX 19103420 19103582 I-element 5347 5171 45 162 '22-23 65.10 8.1 4.9 intergenic not near genes chrX_45_19100001 chrX_19100001 0.49 RAL-361 774 chrX 19462357 19462518 17.6 7414 6943 38 161 '10-28 68.12 9.1 3.8 intron kek5 + chrX_38_19460001 chrX_19460001 0.26 RAL-361 775 chrX 19597636 19597791 P-element 2873 9 57 155 '28-29 46.48 9.1 5.6 intergenic RpS10b + chrX_57_19595001 chrX_19595001 0.49 RAL-361 776 chrX 19739391 19739544 HMS-Beagle 225 6804 13 153 '5-8 65.01 9.5 1.2 3` UTR CG14234 + chrX_13_19735001 chrX_19735001 0.38 RAL-361 777 chrX 19886919 19887190 P-element 2883 2875 42 271 '24-18 50.95 5.8 6.2 intron,3` UTR Hers +,amn - chrX_42_19885001 chrX_19885001 0.57 RAL-361 778 chrX 20106276 20106445 hopper 3 1414 28 169 '24-4 66.21 8.7 2.9 intergenic not near genes chrX_28_20105001 chrX_20105001 0.86 RAL-361 779 chrX 20330477 20330605 P-element 2884 9 36 128 '15-21 47.09 8.8 3.7 intergenic CG1504 - chrX_36_20330001 chrX_20330001 0.42 RAL-361 780 chrX 20366347 20366481 HMS-Beagle 235 6828 28 134 '19-9 63.94 7.2 3.4 intergenic not near genes chrX_28_20365001 chrX_20365001 0.68 RAL-361 781 chrX 20367375 20367542 gtwin 2 471 31 167 '18-13 66.20 6.3 4.2 intergenic not near genes chrX_31_20365001 chrX_20365001 0.58 RAL-361 782 chrX 20491538 20491712 S-element 4 1714 25 174 '9-16 61.59 2.5 7.1 intron RhoGAP19D - chrX_25_20490001 chrX_20490001 0.36 RAL-361 783 chrX 20848802 20848945 roo 9 9043 32 143 '15-17 63.79 7.8 3.6 intron shakB - chrX_32_20845001 chrX_20845001 0.47 RAL-361 784 chrX 20864049 20864171 hobo 11 2920 14 122 '13-1 63.07 7.8 1.6 intron shakB - chrX_14_20860001 chrX_20860001 0.93 RAL-361 785 chrX 20877194 20877353 roo 14 401 45 159 '22-23 68.41 8.2 4.9 intron shakB - chrX_45_20875001 chrX_20875001 0.49 RAL-361 786 chrX 20999479 20999625 BS 5080 2 30 146 '16-14 62.34 7.4 3.6 intergenic not near genes chrX_30_20995001 chrX_20995001 0.53 RAL-361 787 chrX 21055907 21056084 roo 9068 8664 55 177 '32-23 64.80 10.5 4.8 intron bves + chrX_55_21055001 chrX_21055001 0.58 RAL-361 788 chrX 21087534 21087699 mdg3 5255 247 24 165 '22-2 63.87 0.8 13.3 intergenic not near genes chrX_24_21085001 chrX_21085001 0.92 RAL-361 789 chrX 21271066 21271234 flea 4763 248 33 168 '13-20 69.42 9.6 3.1 intron CG32521 - chrX_33_21270001 chrX_21270001 0.39 RAL-361 790 chrX 21636777 21636905 412 7498 5 24 128 '6-18 64.86 7.6 2.8 intergenic not near genes chrX_24_21635001 chrX_21635001 0.25 RAL-361 791 chrX 21638085 21638143 gtwin 6986 6928 16 58 '8-8 65.80 15.7 1.0 intergenic not near genes chrX_16_21635001 chrX_21635001 0.50 RAL-361 792 chrX 21639586 21639713 Tirant 8497 8144 26 127 '24-2 63.88 17.0 1.4 intergenic not near genes chrX_26_21635001 chrX_21635001 0.92 RAL-361 793 chrX 21667905 21667969 gypsy2 37 6500 14 64 '12-2 69.99 29.3 0.5 intergenic not near genes chrX_14_21665001 chrX_21665001 0.86 RAL-361 794 chrX 21668820 21668964 mdg1 7459 41 16 144 '7-9 64.98 13.3 1.1 intergenic not near genes chrX_16_21665001 chrX_21665001 0.44 RAL-361 795 chrX 21907788 21907839 accord 7180 7227 23 51 '10-13 62.35 0.0 23.0 intergenic not near genes chrX_23_21905001 chrX_21905001 0.43 RAL-361 796 chrX 21947716 21947758 mdg1 7078 26 7 42 '5-2 61.73 5.8 1.0 intergenic not near genes chrX_7_21945001 chrX_21945001 0.71 RAL-361 797 chrX 22218723 22218861 copia 244 31 22 138 '10-12 64.58 2.5 6.3 intergenic not near genes chrX_22_22215001 chrX_22215001 0.45 RAL-361 798 chrX 22405592 22405704 Tabor 7318 6902 20 112 '9-11 67.64 15.9 1.2 intergenic not near genes chrX_20_22405001 chrX_22405001 0.45 RAL-361 799 chrX 22517548 22517732 1360 35 3388 28 184 '2-26 61.74 2.7 7.6 intron CG17600 + chrX_28_22515001 chrX_22515001 0.07 RAL-361 800 chrX 22706076 22706240 roo 10 402 53 164 '22-31 67.93 8.0 5.9 intron CR44997 + chrX_53_22705001 chrX_22705001 0.42 RAL-361 801 chrX 22754051 22754174 hopper 22 1413 15 123 '4-11 53.84 12.5 1.1 intron CR44997 + chrX_15_22750001 chrX_22750001 0.27 RAL-361 802 chrX 22899263 22899310 X-element 4568 4615 7 47 '3-4 52.48 9.3 0.7 intergenic not near genes chrX_7_22895001 chrX_22895001 0.43 RAL-361 803 chrX 22916196 22916366 Transpac 3 5220 27 170 '14-13 68.06 6.7 3.5 intergenic not near genes chrX_27_22915001 chrX_22915001 0.52 RAL-361 804 chrX 23108300 23108368 BS3 1463 1404 16 68 '7-9 61.18 22.3 0.7 3` UTR ATbp + chrX_16_23105001 chrX_23105001 0.44 RAL-361 805 chrY 311343 311463 1360 36 26 4 120 '1-3 68.80 1.2 1.8 intergenic not near genes chrY_4_310001 chrY_310001 0.25 RAL-361 806 chrY 975800 975931 1360 3369 28 7 131 '3-4 55.97 116.6 0.1 intergenic not near genes chrY_7_975001 chrY_975001 0.43 RAL-361 807 chrY 1447486 1447542 G2 2959 3044 18 56 '1-17 51.09 15.5 1.1 intergenic not near genes chrY_18_1445001 chrY_1445001 0.06 RAL-361 808 chrY 3648861 3648916 Stalker 7007 213 18 55 '11-7 68.92 4.5 3.3 intergenic not near genes chrY_18_3645001 chrY_3645001 0.61 RAL-361 809 chrY 3648864 3648935 Stalker2 7398 221 11 71 '2-9 73.33 3.7 2.3 intergenic not near genes chrY_11_3645001 chrY_3645001 0.18 RAL-361 810 chrY 3648869 3648916 Stalker4 7122 213 8 47 '5-3 69.40 5.0 1.3 intergenic not near genes chrY_8_3645001 chrY_3645001 0.62 RAL-361