SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	61509	61897	roo	8665	357	63	388	'19-44	69.59	12.2	4.8	intron	Cda5 -	chr2L_63_60001	chr2L_60001	0.30	RAL-340_100b
2	chr2L	134038	134474	S-element	1711	1706	27	436	'19-8	66.26	13.7	1.8	intron,3` UTR	CG11455 +,Gs1 +	chr2L_27_130001	chr2L_130001	0.70	RAL-340_100b
3	chr2L	179614	180016	INE-1	140	142	6	402	'2-4	71.31	24.0	0.2	intron	spen +	chr2L_6_175001	chr2L_175001	0.33	RAL-340_100b
4	chr2L	196135	196221	F-element	4400	4457	4	86	'1-3	68.66	34.7	0.1	exon	spen +	chr2L_4_195001	chr2L_195001	0.25	RAL-340_100b
5	chr2L	374004	374045	FB	738	688	7	41	'6-1	68.43	20.0	0.3	intergenic	not near genes	chr2L_7_370001	chr2L_370001	0.86	RAL-340_100b
6	chr2L	431848	432200	P-element	4	60	47	352	'39-8	47.51	12.3	3.5	5` UTR	ex +	chr2L_47_430001	chr2L_430001	0.83	RAL-340_100b
7	chr2L	686696	686950	I-element	97	5236	45	254	'28-17	66.07	15.3	2.8	intron	ds -	chr2L_45_685001	chr2L_685001	0.62	RAL-340_100b
8	chr2L	903782	904033	1360	1	3333	102	251	'93-9	66.45	13.4	7.1	intergenic	CR45261 +	chr2L_102_900001	chr2L_900001	0.91	RAL-340_100b
9	chr2L	975492	975617	412	65	457	25	125	'6-19	65.59	8.1	2.7	intergenic	not near genes	chr2L_25_975001	chr2L_975001	0.24	RAL-340_100b
10	chr2L	1143594	1143688	accord	7142	253	5	94	'4-1	73.25	41.4	0.1	intron	MFS3 +	chr2L_5_1140001	chr2L_1140001	0.80	RAL-340_100b
11	chr2L	2317313	2317651	INE-1	152	246	7	338	'2-5	70.25	38.1	0.2	intron,intron	CG9967 -,eys +	chr2L_7_2315001	chr2L_2315001	0.29	RAL-340_100b
12	chr2L	2483624	2483850	hobo	2922	24	29	226	'3-26	63.29	11.6	2.3	intergenic	not near genes	chr2L_29_2480001	chr2L_2480001	0.10	RAL-340_100b
13	chr2L	2621428	2621784	BS	5047	5044	23	356	'21-2	58.76	10.1	2.1	intergenic	not near genes	chr2L_23_2620001	chr2L_2620001	0.91	RAL-340_100b
14	chr2L	2635470	2635832	17.6	441	7017	61	362	'31-30	68.45	13.2	4.3	intergenic	not near genes	chr2L_61_2635001	chr2L_2635001	0.51	RAL-340_100b
15	chr2L	2687460	2687584	accord	185	180	6	124	'2-4	72.39	31.6	0.2	intron	CG31690 +	chr2L_6_2685001	chr2L_2685001	0.33	RAL-340_100b
16	chr2L	2855401	2855555	jockey	27	119	23	154	'19-4	70.59	22.5	1.0	intron	CG3104 -	chr2L_23_2855001	chr2L_2855001	0.83	RAL-340_100b
17	chr2L	2916765	2917020	mdg1	21	7062	4	255	'2-2	74.13	15.2	0.2	intron	lilli +	chr2L_4_2915001	chr2L_2915001	0.50	RAL-340_100b
18	chr2L	2917908	2918163	roo	9046	10	16	255	'5-11	63.35	7.7	1.8	intron	lilli +	chr2L_16_2915001	chr2L_2915001	0.31	RAL-340_100b
19	chr2L	3085524	3085648	gtwin	46	48	4	124	'2-2	46.00	5.9	0.6	intron	toc -	chr2L_4_3085001	chr2L_3085001	0.50	RAL-340_100b
20	chr2L	3144508	3144615	1360	3186	3170	4	107	'2-2	66.17	23.1	0.2	5` UTR	toc -	chr2L_4_3140001	chr2L_3140001	0.50	RAL-340_100b
21	chr2L	3165938	3166271	FB	49	69	92	333	'36-56	64.16	15.2	5.7	intron	Hydr2 +	chr2L_92_3165001	chr2L_3165001	0.39	RAL-340_100b
22	chr2L	3174629	3174922	Ivk	5378	5363	25	293	'13-12	63.10	5.1	4.1	intergenic	CG15404 +	chr2L_25_3170001	chr2L_3170001	0.52	RAL-340_100b
23	chr2L	3212272	3212624	I-element	85	5334	75	352	'68-7	64.87	10.6	6.5	intergenic	not near genes	chr2L_75_3210001	chr2L_3210001	0.91	RAL-340_100b
24	chr2L	3440474	3440574	Juan	60	110	14	100	'12-2	64.31	4.9	2.4	intergenic	not near genes	chr2L_14_3440001	chr2L_3440001	0.86	RAL-340_100b
25	chr2L	3463170	3463205	INE-1	171	154	4	35	'2-2	74.57	14.1	0.3	3` UTR	msl-2 -	chr2L_4_3460001	chr2L_3460001	0.50	RAL-340_100b
26	chr2L	3595595	3596026	I-element	5345	49	68	431	'8-60	64.06	8.4	7.2	intergenic	not near genes	chr2L_68_3595001	chr2L_3595001	0.12	RAL-340_100b
27	chr2L	3833060	3833349	blood	7015	366	50	289	'46-4	62.94	9.7	4.7	intergenic	not near genes	chr2L_50_3830001	chr2L_3830001	0.92	RAL-340_100b
28	chr2L	3872292	3872514	Rt1b	125	123	4	222	'3-1	77.76	5.6	0.6	exon	CG31957 -	chr2L_4_3870001	chr2L_3870001	0.75	RAL-340_100b
29	chr2L	3891583	3891823	I-element	5311	5191	23	240	'22-1	61.75	12.2	1.7	intron	capu -	chr2L_23_3890001	chr2L_3890001	0.96	RAL-340_100b
30	chr2L	3908245	3908396	jockey	4986	4948	17	151	'2-15	56.28	9.2	1.7	intron	fred -	chr2L_17_3905001	chr2L_3905001	0.12	RAL-340_100b
31	chr2L	4018510	4018845	flea	4759	254	35	335	'33-2	67.71	16.5	2.0	intergenic	not near genes	chr2L_35_4015001	chr2L_4015001	0.94	RAL-340_100b
32	chr2L	4270015	4270221	jockey	4789	4698	14	206	'12-2	62.17	8.8	1.4	intergenic	not near genes	chr2L_14_4270001	chr2L_4270001	0.86	RAL-340_100b
33	chr2L	4375270	4375583	blood	7180	168	4	313	'3-1	75.35	19.1	0.2	intron	Traf4 +	chr2L_4_4375001	chr2L_4375001	0.75	RAL-340_100b
34	chr2L	4712853	4713094	Tabor	468	6847	47	241	'5-42	64.27	10.9	3.9	intron	CG34351 +	chr2L_47_4710001	chr2L_4710001	0.11	RAL-340_100b
35	chr2L	4777450	4777558	Bari1	139	304	4	108	'3-1	75.53	21.4	0.2	intron	CG15630 -	chr2L_4_4775001	chr2L_4775001	0.75	RAL-340_100b
36	chr2L	4868017	4868301	gypsy7	5004	5009	6	284	'2-4	64.10	11.7	0.5	intron	pog +	chr2L_6_4865001	chr2L_4865001	0.33	RAL-340_100b
37	chr2L	5352025	5352057	Stalker3T	204	202	9	32	'1-8	56.83	25.8	0.3	intron	nompC +	chr2L_9_5350001	chr2L_5350001	0.11	RAL-340_100b
38	chr2L	5449211	5449410	1360	3177	3305	5	199	'3-2	71.57	25.6	0.2	intergenic	not near genes	chr2L_5_5445001	chr2L_5445001	0.60	RAL-340_100b
39	chr2L	5608500	5608704	INE-1	120	88	12	204	'9-3	64.84	6.7	1.6	intron	CG14010 -	chr2L_12_5605001	chr2L_5605001	0.75	RAL-340_100b
40	chr2L	5710862	5711009	Quasimodo	149	7362	10	147	'8-2	66.91	13.3	0.7	intron	CG7236 +	chr2L_10_5710001	chr2L_5710001	0.80	RAL-340_100b
41	chr2L	5749135	5749422	jockey	4555	4925	7	287	'1-6	74.30	10.5	0.6	intron	CG11030 +	chr2L_7_5745001	chr2L_5745001	0.14	RAL-340_100b
42	chr2L	5810121	5810298	jockey	144	4839	48	177	'17-31	66.95	11.6	3.8	5` UTR	CR44575 +	chr2L_48_5810001	chr2L_5810001	0.35	RAL-340_100b
43	chr2L	5861600	5861839	diver	5891	6018	52	239	'46-6	64.48	6.3	7.1	exon	rau -	chr2L_52_5860001	chr2L_5860001	0.88	RAL-340_100b
44	chr2L	5865615	5865948	jockey	4980	4727	43	333	'3-40	66.87	14.2	2.8	intron	rau -	chr2L_43_5865001	chr2L_5865001	0.07	RAL-340_100b
45	chr2L	5866207	5866488	roo	8664	9016	92	281	'89-3	64.84	10.4	8.1	intron	rau -	chr2L_92_5865001	chr2L_5865001	0.97	RAL-340_100b
46	chr2L	5931237	5931698	412	495	7077	69	461	'18-51	64.66	9.4	6.6	intron	dsf +	chr2L_69_5930001	chr2L_5930001	0.26	RAL-340_100b
47	chr2L	6100919	6101095	S-element	38	134	7	176	'1-6	63.97	6.0	1.0	intron	stai +	chr2L_7_6100001	chr2L_6100001	0.14	RAL-340_100b
48	chr2L	6151061	6151222	412	7079	38	30	161	'9-21	67.62	16.1	1.8	intergenic	not near genes	chr2L_30_6150001	chr2L_6150001	0.30	RAL-340_100b
49	chr2L	6178634	6178879	P-element	51	2842	56	245	'23-33	45.56	7.6	6.5	intergenic	CG34380 +	chr2L_56_6175001	chr2L_6175001	0.41	RAL-340_100b
50	chr2L	6280030	6280279	F-element	4455	372	4	249	'2-2	70.33	19.6	0.2	intron	Ddr +	chr2L_4_6280001	chr2L_6280001	0.50	RAL-340_100b
51	chr2L	6470112	6470367	297	6580	327	53	255	'46-7	69.27	13.5	3.7	intron	mmy -	chr2L_53_6470001	chr2L_6470001	0.87	RAL-340_100b
52	chr2L	6494350	6494721	P-element	47	2885	35	371	'1-34	47.18	10.2	3.1	intron,exon	CG31638 +,CG9547 -	chr2L_35_6490001	chr2L_6490001	0.03	RAL-340_100b
53	chr2L	6647018	6647362	Juan	4187	4114	51	344	'3-48	65.41	12.5	3.8	intron	CG31635 -	chr2L_51_6645001	chr2L_6645001	0.06	RAL-340_100b
54	chr2L	7038642	7038895	accord	179	7026	4	253	'2-2	64.48	25.4	0.2	intron	milt +	chr2L_4_7035001	chr2L_7035001	0.50	RAL-340_100b
55	chr2L	7196279	7196449	mdg1	39	20	4	170	'3-1	71.90	28.2	0.1	intron	CG4502 -	chr2L_4_7195001	chr2L_7195001	0.75	RAL-340_100b
56	chr2L	7410667	7410902	diver	184	5925	31	235	'19-12	67.40	6.7	4.0	intergenic	CG15818 +	chr2L_31_7410001	chr2L_7410001	0.61	RAL-340_100b
57	chr2L	7459502	7459751	BS	5040	5062	42	249	'34-8	64.38	9.9	3.9	intron	Gr28b -	chr2L_42_7455001	chr2L_7455001	0.81	RAL-340_100b
58	chr2L	7492924	7493114	3S18	340	49	27	190	'18-9	64.27	4.7	4.7	intron	Ziz -	chr2L_27_7490001	chr2L_7490001	0.67	RAL-340_100b
59	chr2L	7509150	7509676	mdg1	38	7058	5	526	'3-2	76.29	13.4	0.3	intron	RapGAP1 -	chr2L_5_7505001	chr2L_7505001	0.60	RAL-340_100b
60	chr2L	7534725	7534942	jockey	4987	4833	11	217	'3-8	67.22	11.2	0.9	intron	RapGAP1 -	chr2L_11_7530001	chr2L_7530001	0.27	RAL-340_100b
61	chr2L	7579088	7579489	BS	5057	5063	17	401	'14-3	71.41	14.0	1.1	intergenic	RapGAP1 -	chr2L_17_7575001	chr2L_7575001	0.82	RAL-340_100b
62	chr2L	7769628	7769770	hobo	2937	72	53	142	'34-19	61.44	13.9	3.6	intron	CG7191 +	chr2L_53_7765001	chr2L_7765001	0.64	RAL-340_100b
63	chr2L	8087685	8087854	jockey	4801	4815	29	169	'5-24	65.17	12.0	2.2	intron	Bsg +	chr2L_29_8085001	chr2L_8085001	0.17	RAL-340_100b
64	chr2L	8470871	8471115	I-element	5265	24	63	244	'34-29	66.16	10.3	5.6	intron	d +	chr2L_63_8470001	chr2L_8470001	0.54	RAL-340_100b
65	chr2L	8776129	8776414	blood	7389	32	52	285	'48-4	65.95	10.2	4.6	exon	CG9466 -	chr2L_52_8775001	chr2L_8775001	0.92	RAL-340_100b
66	chr2L	8777195	8777295	G4	3827	3814	5	100	'3-2	61.89	6.7	0.6	intergenic	CG9468 -	chr2L_5_8775001	chr2L_8775001	0.60	RAL-340_100b
67	chr2L	9176858	9177210	1360	3210	207	4	352	'2-2	62.93	21.3	0.2	intron	tai +	chr2L_4_9175001	chr2L_9175001	0.50	RAL-340_100b
68	chr2L	9197943	9198290	roo	406	26	33	347	'14-19	62.38	8.9	3.3	intron	tai +	chr2L_33_9195001	chr2L_9195001	0.42	RAL-340_100b
69	chr2L	9249845	9249984	roo	408	8761	31	139	'29-2	65.61	11.7	2.4	3` UTR	tai +	chr2L_31_9245001	chr2L_9245001	0.94	RAL-340_100b
70	chr2L	9275419	9275594	accord	7031	185	4	175	'1-3	64.04	38.1	0.1	intron	Ggamma30A +	chr2L_4_9275001	chr2L_9275001	0.25	RAL-340_100b
71	chr2L	9439659	9439725	I-element	4952	5042	4	66	'2-2	68.30	19.6	0.2	intron	numb +	chr2L_4_9435001	chr2L_9435001	0.50	RAL-340_100b
72	chr2L	9486695	9486875	hobo	2724	173	19	180	'9-10	64.02	0.8	10.6	intergenic	not near genes	chr2L_19_9485001	chr2L_9485001	0.47	RAL-340_100b
73	chr2L	9526443	9526730	roo	399	8697	58	287	'36-22	64.48	13.7	3.9	intron	Oatp30B +	chr2L_58_9525001	chr2L_9525001	0.62	RAL-340_100b
74	chr2L	9547505	9547813	INE-1	148	401	11	308	'6-5	62.68	15.9	0.7	intergenic	CG13114 +,jp -	chr2L_11_9545001	chr2L_9545001	0.55	RAL-340_100b
75	chr2L	9668226	9668425	Transpac	164	220	35	199	'33-2	67.40	9.8	3.2	intergenic	not near genes	chr2L_35_9665001	chr2L_9665001	0.94	RAL-340_100b
76	chr2L	9722988	9723026	I-element	5146	4967	27	38	'1-26	46.70	45.2	0.6	intron	Nckx30C -	chr2L_27_9720001	chr2L_9720001	0.04	RAL-340_100b
77	chr2L	9887500	9887746	accord	7147	183	5	246	'3-2	58.59	16.1	0.3	intergenic	CR44701 +	chr2L_5_9885001	chr2L_9885001	0.60	RAL-340_100b
78	chr2L	9984370	9984549	P-element	54	2869	17	179	'4-13	44.13	10.8	1.4	intron	CR13130 -	chr2L_17_9980001	chr2L_9980001	0.24	RAL-340_100b
79	chr2L	10040010	10040171	I-element	5340	5298	5	161	'2-3	64.87	6.0	0.7	intergenic	not near genes	chr2L_5_10040001	chr2L_10040001	0.40	RAL-340_100b
80	chr2L	10291417	10291624	jockey	4847	4861	33	207	'24-9	65.45	13.7	2.2	intron	CG5604 -	chr2L_33_10290001	chr2L_10290001	0.73	RAL-340_100b
81	chr2L	10457945	10458203	mdg3	238	5255	22	258	'1-21	52.63	6.3	3.0	exon	LM408 +	chr2L_22_10455001	chr2L_10455001	0.05	RAL-340_100b
82	chr2L	10561264	10561296	F-element	4435	4509	4	32	'2-2	69.61	41.8	0.1	intron	Trim9 +	chr2L_4_10560001	chr2L_10560001	0.50	RAL-340_100b
83	chr2L	10746358	10746494	opus	499	3	28	136	'19-9	66.17	13.2	2.0	intron	CG17124 -	chr2L_28_10745001	chr2L_10745001	0.68	RAL-340_100b
84	chr2L	10810333	10810487	BS	5030	5061	7	154	'4-3	72.87	15.0	0.4	intron	Nos -	chr2L_7_10810001	chr2L_10810001	0.57	RAL-340_100b
85	chr2L	11086601	11086675	Cr1a	415	370	6	74	'3-3	70.46	24.1	0.2	intergenic	CG16854 +	chr2L_6_11085001	chr2L_11085001	0.50	RAL-340_100b
86	chr2L	11153968	11154003	INE-1	551	537	4	35	'1-3	71.49	25.9	0.1	intron	CG6287 -	chr2L_4_11150001	chr2L_11150001	0.25	RAL-340_100b
87	chr2L	11173879	11174086	pogo	2058	30	49	207	'31-18	66.88	9.9	4.5	intron	Ca-beta -	chr2L_49_11170001	chr2L_11170001	0.63	RAL-340_100b
88	chr2L	11185072	11185189	accord	7110	183	4	117	'1-3	73.19	20.9	0.2	intron	Ca-beta -	chr2L_4_11185001	chr2L_11185001	0.25	RAL-340_100b
89	chr2L	11210794	11210904	F-element	4639	4651	10	110	'5-5	73.86	15.5	0.6	intron	ab +	chr2L_10_11210001	chr2L_11210001	0.50	RAL-340_100b
90	chr2L	11528130	11528603	pogo	18	2040	19	473	'15-4	67.82	10.1	1.7	5` UTR	CG31705 -	chr2L_19_11525001	chr2L_11525001	0.79	RAL-340_100b
91	chr2L	11870963	11871316	flea	5000	4829	55	353	'24-31	66.61	10.7	4.7	intron	Pde1c -	chr2L_55_11870001	chr2L_11870001	0.44	RAL-340_100b
92	chr2L	11931346	11931523	Doc	4456	4461	4	177	'2-2	60.84	18.0	0.2	intergenic	not near genes	chr2L_4_11930001	chr2L_11930001	0.50	RAL-340_100b
93	chr2L	12142814	12142932	accord	7024	160	4	118	'1-3	71.84	32.6	0.1	5` UTR	CG31760 +	chr2L_4_12140001	chr2L_12140001	0.25	RAL-340_100b
94	chr2L	12191159	12191462	roo	410	6	23	303	'2-21	56.58	12.5	1.7	intron	aret +	chr2L_23_12190001	chr2L_12190001	0.09	RAL-340_100b
95	chr2L	12200715	12201143	gtwin	7219	305	4	428	'3-1	74.78	9.4	0.4	intron	aret +	chr2L_4_12200001	chr2L_12200001	0.75	RAL-340_100b
96	chr2L	12205445	12205552	NOF	3960	3958	5	107	'2-3	72.60	26.6	0.2	intron	aret +	chr2L_5_12205001	chr2L_12205001	0.40	RAL-340_100b
97	chr2L	12229449	12229489	BS	5084	5065	6	40	'4-2	55.84	3.2	1.4	intron	aret +	chr2L_6_12225001	chr2L_12225001	0.67	RAL-340_100b
98	chr2L	12246494	12246802	Doc	4682	4258	9	308	'6-3	68.20	6.2	1.2	intron	aret +	chr2L_9_12245001	chr2L_12245001	0.67	RAL-340_100b
99	chr2L	12277896	12278116	accord	7081	180	4	220	'2-2	61.18	45.7	0.1	intron	aret +	chr2L_4_12275001	chr2L_12275001	0.50	RAL-340_100b
100	chr2L	12293181	12293688	roo	8664	399	71	507	'39-32	68.98	13.7	4.8	intron	aret +	chr2L_71_12290001	chr2L_12290001	0.55	RAL-340_100b
101	chr2L	12333578	12333781	Stalker4	7036	6954	6	203	'2-4	70.25	7.9	0.7	intergenic	not near genes	chr2L_6_12330001	chr2L_12330001	0.33	RAL-340_100b
102	chr2L	12333655	12333905	Stalker	6945	6849	8	250	'7-1	59.52	9.2	0.8	intergenic	not near genes	chr2L_8_12330001	chr2L_12330001	0.88	RAL-340_100b
103	chr2L	12398284	12398335	P-element	53	2864	4	51	'1-3	42.92	21.4	0.2	5` UTR	Pkd2 +	chr2L_4_12395001	chr2L_12395001	0.25	RAL-340_100b
104	chr2L	12470745	12471246	1360	3295	7	108	501	'65-43	66.14	11.3	8.8	intron	bun -	chr2L_108_12470001	chr2L_12470001	0.60	RAL-340_100b
105	chr2L	12505075	12505271	P-element	2834	2883	34	196	'5-29	52.41	15.3	2.1	intron	bun -	chr2L_34_12505001	chr2L_12505001	0.15	RAL-340_100b
106	chr2L	12505230	12505365	S-element	1711	1713	5	135	'1-4	71.20	13.0	0.4	intron	bun -	chr2L_5_12505001	chr2L_12505001	0.20	RAL-340_100b
107	chr2L	12535549	12535582	Doc2-element	254	219	4	33	'2-2	73.60	31.1	0.1	intron	bun -	chr2L_4_12535001	chr2L_12535001	0.50	RAL-340_100b
108	chr2L	12677438	12677473	Doc2-element	246	246	4	35	'1-3	61.18	28.6	0.1	intron	pdm2 +	chr2L_4_12675001	chr2L_12675001	0.25	RAL-340_100b
109	chr2L	12744641	12744991	F-element	4676	60	22	350	'5-17	64.14	8.8	2.2	3` UTR	MRP +	chr2L_22_12740001	chr2L_12740001	0.23	RAL-340_100b
110	chr2L	12904201	12904436	hobo	2919	53	45	235	'44-1	63.77	17.4	2.4	intergenic	not near genes	chr2L_45_12900001	chr2L_12900001	0.98	RAL-340_100b
111	chr2L	13004484	13004564	P-element	16	2874	14	80	'5-9	44.21	17.1	0.8	5` UTR	Tor +	chr2L_14_13000001	chr2L_13000001	0.36	RAL-340_100b
112	chr2L	13079060	13079387	TART-A	13139	13138	6	327	'1-5	59.66	7.8	0.7	intergenic	not near genes	chr2L_6_13075001	chr2L_13075001	0.17	RAL-340_100b
113	chr2L	13156532	13156616	opus	7050	7161	20	84	'15-5	71.42	9.5	1.9	intergenic	not near genes	chr2L_20_13155001	chr2L_13155001	0.75	RAL-340_100b
114	chr2L	13276842	13276935	mdg1	7057	7061	4	93	'3-1	76.61	22.1	0.2	intron	CG44085 +	chr2L_4_13275001	chr2L_13275001	0.75	RAL-340_100b
115	chr2L	13294164	13294617	roo	8668	401	61	453	'38-23	65.36	9.0	6.1	intron	CG31729 +	chr2L_61_13290001	chr2L_13290001	0.62	RAL-340_100b
116	chr2L	13317565	13317652	X-element	4548	4559	8	87	'4-4	65.84	6.4	1.1	intron	CG43778 -	chr2L_8_13315001	chr2L_13315001	0.50	RAL-340_100b
117	chr2L	13317567	13317611	flea	4991	4993	4	44	'3-1	61.03	8.1	0.4	intron	CG43778 -	chr2L_4_13315001	chr2L_13315001	0.75	RAL-340_100b
118	chr2L	13599082	13599183	G2	3038	2963	4	101	'1-3	75.17	16.9	0.2	intron	kuz +	chr2L_4_13595001	chr2L_13595001	0.25	RAL-340_100b
119	chr2L	13743249	13743453	F-element	487	485	17	204	'1-16	44.66	16.9	0.9	intergenic	not near genes	chr2L_17_13740001	chr2L_13740001	0.06	RAL-340_100b
120	chr2L	13784025	13784160	S-element	110	1405	7	135	'4-3	74.48	16.1	0.4	intron	CG16890 -	chr2L_7_13780001	chr2L_13780001	0.57	RAL-340_100b
121	chr2L	13842263	13842413	jockey	5	4866	22	150	'17-5	59.88	13.1	1.6	intron	CenG1A +	chr2L_22_13840001	chr2L_13840001	0.77	RAL-340_100b
122	chr2L	13865235	13865512	Ivk	5	5372	40	277	'37-3	63.93	8.5	4.2	intron	CenG1A +	chr2L_40_13865001	chr2L_13865001	0.93	RAL-340_100b
123	chr2L	14444056	14444290	accord	7025	185	4	234	'2-2	70.22	30.4	0.1	intergenic	not near genes	chr2L_4_14440001	chr2L_14440001	0.50	RAL-340_100b
124	chr2L	14464029	14464285	FB	702	797	5	256	'1-4	73.72	14.5	0.3	intergenic	not near genes	chr2L_5_14460001	chr2L_14460001	0.20	RAL-340_100b
125	chr2L	14682569	14682685	FB	6	11	63	116	'36-27	67.52	11.4	5.1	intron	osp -	chr2L_63_14680001	chr2L_14680001	0.57	RAL-340_100b
126	chr2L	14889839	14889981	jockey	4930	4861	8	142	'2-6	64.31	17.8	0.4	intergenic	not near genes	chr2L_8_14885001	chr2L_14885001	0.25	RAL-340_100b
127	chr2L	15004624	15005082	INE-1	547	19	4	458	'3-1	76.53	17.6	0.2	intergenic	not near genes	chr2L_4_15000001	chr2L_15000001	0.75	RAL-340_100b
128	chr2L	15039353	15039735	P-element	2722	2878	50	382	'48-2	45.65	11.0	4.2	intergenic	Su(H) +,CIAPIN1 -	chr2L_50_15035001	chr2L_15035001	0.96	RAL-340_100b
129	chr2L	15040386	15040446	mariner2	827	829	4	60	'1-3	71.00	14.7	0.3	intron	Su(H) +	chr2L_4_15040001	chr2L_15040001	0.25	RAL-340_100b
130	chr2L	15063130	15063394	invader5	65	3749	4	264	'3-1	75.80	24.1	0.2	intron,3` UTR	vas +,vig -	chr2L_4_15060001	chr2L_15060001	0.75	RAL-340_100b
131	chr2L	15350915	15351162	Juan	3959	3783	11	247	'8-3	65.63	8.4	1.2	intergenic	not near genes	chr2L_11_15350001	chr2L_15350001	0.73	RAL-340_100b
132	chr2L	15368199	15368496	Tirant	86	353	65	297	'45-20	66.69	13.1	4.6	intergenic	not near genes	chr2L_65_15365001	chr2L_15365001	0.69	RAL-340_100b
133	chr2L	15575285	15575607	412	495	7103	60	322	'15-45	65.62	10.7	5.1	intron	kek3 +	chr2L_60_15575001	chr2L_15575001	0.25	RAL-340_100b
134	chr2L	15888382	15888600	Juan	49	4176	9	218	'5-4	69.21	10.5	0.8	intergenic	Tep1 -	chr2L_9_15885001	chr2L_15885001	0.56	RAL-340_100b
135	chr2L	15919884	15920134	jockey	4952	4941	51	250	'3-48	62.23	9.7	4.8	intron	beat-Ib -	chr2L_51_15915001	chr2L_15915001	0.06	RAL-340_100b
136	chr2L	15983316	15983591	jockey	4924	4727	29	275	'7-22	67.23	14.0	1.9	intergenic	not near genes	chr2L_29_15980001	chr2L_15980001	0.24	RAL-340_100b
137	chr2L	16110517	16110920	roo	8703	387	53	403	'27-26	68.63	7.0	6.6	intergenic	not near genes	chr2L_53_16110001	chr2L_16110001	0.51	RAL-340_100b
138	chr2L	16217660	16217717	Doc	4511	4427	9	57	'8-1	66.89	43.8	0.2	intergenic	not near genes	chr2L_9_16215001	chr2L_16215001	0.89	RAL-340_100b
139	chr2L	16217660	16217911	R1A1-element	209	5011	6	251	'5-1	59.80	25.6	0.2	intergenic	not near genes	chr2L_6_16215001	chr2L_16215001	0.83	RAL-340_100b
140	chr2L	16503050	16503400	pogo	2052	20	56	350	'39-17	67.51	12.7	4.1	intron	Tpr2 +	chr2L_56_16500001	chr2L_16500001	0.70	RAL-340_100b
141	chr2L	16587349	16587508	flea	244	244	9	159	'4-5	63.59	9.7	0.8	intron	CG42389 +	chr2L_9_16585001	chr2L_16585001	0.44	RAL-340_100b
142	chr2L	16595044	16595315	roo	8975	76	50	271	'30-20	70.10	8.4	5.3	intron	CG42389 +	chr2L_50_16595001	chr2L_16595001	0.60	RAL-340_100b
143	chr2L	16646922	16646952	P-element	148	146	4	30	'2-2	71.81	15.1	0.2	intron	CG42389 +	chr2L_4_16645001	chr2L_16645001	0.50	RAL-340_100b
144	chr2L	16881047	16881117	P-element	2880	34	6	70	'4-2	53.09	17.8	0.3	5` UTR,exon	CG31743 +,CG34313 +	chr2L_6_16880001	chr2L_16880001	0.67	RAL-340_100b
145	chr2L	16980480	16980692	F-element	43	56	17	212	'2-15	62.99	9.6	1.6	intron	beat-IIIb +	chr2L_17_16980001	chr2L_16980001	0.12	RAL-340_100b
146	chr2L	17025055	17025294	I-element	42	5335	39	239	'36-3	57.99	10.4	3.4	intergenic	not near genes	chr2L_39_17025001	chr2L_17025001	0.92	RAL-340_100b
147	chr2L	17026878	17026931	F-element	4663	4664	8	53	'3-5	70.99	23.4	0.3	intergenic	not near genes	chr2L_8_17025001	chr2L_17025001	0.38	RAL-340_100b
148	chr2L	17361553	17361825	INE-1	576	582	6	272	'2-4	69.73	11.0	0.5	intergenic	CR44346 +	chr2L_6_17360001	chr2L_17360001	0.33	RAL-340_100b
149	chr2L	17448160	17448452	FB	155	28	70	292	'64-6	64.13	10.2	6.2	intron	dl -	chr2L_70_17445001	chr2L_17445001	0.91	RAL-340_100b
150	chr2L	17549196	17549683	mdg1	7069	411	44	487	'18-26	65.23	9.8	4.1	intergenic	not near genes	chr2L_44_17545001	chr2L_17545001	0.41	RAL-340_100b
151	chr2L	17550539	17550624	Transib-N1_DM	417	415	6	85	'3-3	62.82	14.1	0.4	intergenic	not near genes	chr2L_6_17550001	chr2L_17550001	0.50	RAL-340_100b
152	chr2L	17671625	17672013	Doc	27	4624	35	388	'20-15	65.70	9.8	3.2	intron	CadN -	chr2L_35_17670001	chr2L_17670001	0.57	RAL-340_100b
153	chr2L	17840885	17841236	Juan	4050	4060	22	351	'11-11	58.41	6.6	2.9	intron	CadN2 -	chr2L_22_17840001	chr2L_17840001	0.50	RAL-340_100b
154	chr2L	17973556	17973608	INE-1	157	31	4	52	'2-2	63.41	33.3	0.1	intron,3` UTR	btv -,CG5674 +	chr2L_4_17970001	chr2L_17970001	0.50	RAL-340_100b
155	chr2L	18111226	18111344	INE-1	173	30	6	118	'5-1	69.97	9.9	0.6	intergenic	not near genes	chr2L_6_18110001	chr2L_18110001	0.83	RAL-340_100b
156	chr2L	18113369	18113521	Tc1	23	59	14	152	'10-4	66.15	12.2	1.1	intergenic	CG44476 -	chr2L_14_18110001	chr2L_18110001	0.71	RAL-340_100b
157	chr2L	18159044	18159115	rover	207	313	5	71	'1-4	67.48	10.6	0.4	intron	CG7200 -	chr2L_5_18155001	chr2L_18155001	0.20	RAL-340_100b
158	chr2L	18159763	18159913	INE-1	558	552	8	150	'2-6	71.26	23.9	0.3	intergenic	CG42750 -,CG7200 -	chr2L_8_18155001	chr2L_18155001	0.25	RAL-340_100b
159	chr2L	18177033	18177103	INE-1	553	32	7	70	'5-2	61.19	10.8	0.6	intron	CG42750 -	chr2L_7_18175001	chr2L_18175001	0.71	RAL-340_100b
160	chr2L	18205560	18205920	I-element	5343	5043	21	360	'10-11	63.86	15.8	1.2	intron	CG42750 -	chr2L_21_18205001	chr2L_18205001	0.48	RAL-340_100b
161	chr2L	18403817	18404015	S-element	1258	159	4	198	'2-2	66.60	21.6	0.2	intergenic	CR44487 +	chr2L_4_18400001	chr2L_18400001	0.50	RAL-340_100b
162	chr2L	18617083	18617440	P-element	104	2829	27	357	'10-17	47.76	9.2	2.6	intergenic	MESR3 +	chr2L_27_18615001	chr2L_18615001	0.37	RAL-340_100b
163	chr2L	18648131	18648439	rover	7110	348	30	308	'29-1	66.77	8.4	3.2	intron	MESR3 +	chr2L_30_18645001	chr2L_18645001	0.97	RAL-340_100b
164	chr2L	19121201	19121527	pogo	1976	83	26	326	'14-12	70.52	10.0	2.4	intergenic	l(2)37Cc -	chr2L_26_19120001	chr2L_19120001	0.54	RAL-340_100b
165	chr2L	19158318	19158685	P-element	74	2856	5	367	'4-1	50.31	20.2	0.2	intron,3` UTR	brat +,CR44977 -	chr2L_5_19155001	chr2L_19155001	0.80	RAL-340_100b
166	chr2L	19398577	19398869	mdg1	7066	7069	6	292	'4-2	69.89	8.6	0.6	intergenic	CG17544 -	chr2L_6_19395001	chr2L_19395001	0.67	RAL-340_100b
167	chr2L	19461145	19461298	hopper	160	160	5	153	'3-2	66.82	16.7	0.3	intergenic	not near genes	chr2L_5_19460001	chr2L_19460001	0.60	RAL-340_100b
168	chr2L	19518206	19518475	Quasimodo	75	7336	13	269	'9-4	66.90	12.3	1.0	intron	CR43363 -	chr2L_13_19515001	chr2L_19515001	0.69	RAL-340_100b
169	chr2L	19619501	19619726	Quasimodo	79	7365	25	225	'5-20	69.10	12.8	1.8	intron	Lar +	chr2L_25_19615001	chr2L_19615001	0.20	RAL-340_100b
170	chr2L	19817821	19817862	G4	3826	3786	5	41	'4-1	71.90	12.2	0.4	intron	sick +	chr2L_5_19815001	chr2L_19815001	0.80	RAL-340_100b
171	chr2L	19841333	19841651	jockey	113	4981	62	318	'31-31	67.08	16.3	3.6	intron	sick +	chr2L_62_19840001	chr2L_19840001	0.50	RAL-340_100b
172	chr2L	19940105	19940362	HMS-Beagle	6799	6974	52	257	'49-3	68.53	15.9	3.1	intron	sick +	chr2L_52_19940001	chr2L_19940001	0.94	RAL-340_100b
173	chr2L	20025665	20025851	INE-1	545	558	4	186	'1-3	65.25	17.3	0.2	exon	CG10659 -	chr2L_4_20025001	chr2L_20025001	0.25	RAL-340_100b
174	chr2L	20026401	20026733	INE-1	33	498	4	332	'3-1	70.03	12.3	0.3	intergenic	not near genes	chr2L_4_20025001	chr2L_20025001	0.75	RAL-340_100b
175	chr2L	20117245	20117382	1360	197	236	4	137	'3-1	66.59	18.8	0.2	intergenic	not near genes	chr2L_4_20115001	chr2L_20115001	0.75	RAL-340_100b
176	chr2L	20169211	20169368	hopper2	373	440	13	157	'7-6	74.80	0.8	7.2	intergenic	not near genes	chr2L_13_20165001	chr2L_20165001	0.54	RAL-340_100b
177	chr2L	20169321	20169460	invader3	188	5457	39	139	'33-6	66.09	0.6	24.4	intergenic	not near genes	chr2L_39_20165001	chr2L_20165001	0.85	RAL-340_100b
178	chr2L	20174766	20174851	1360	3377	3010	4	85	'3-1	64.66	7.6	0.5	intergenic	not near genes	chr2L_4_20170001	chr2L_20170001	0.75	RAL-340_100b
179	chr2L	20230992	20231149	accord	182	7030	4	157	'2-2	78.27	27.6	0.1	intergenic	not near genes	chr2L_4_20230001	chr2L_20230001	0.50	RAL-340_100b
180	chr2L	20255082	20255137	jockey	11	67	17	55	'10-7	62.92	13.8	1.1	intergenic	not near genes	chr2L_17_20255001	chr2L_20255001	0.59	RAL-340_100b
181	chr2L	20267073	20267431	jockey	4724	4977	24	358	'4-20	65.81	13.7	1.6	intergenic	not near genes	chr2L_24_20265001	chr2L_20265001	0.17	RAL-340_100b
182	chr2L	20489514	20489669	412	334	165	46	155	'26-20	68.44	9.1	4.6	5` UTR	CR45359 +	chr2L_46_20485001	chr2L_20485001	0.57	RAL-340_100b
183	chr2L	20567666	20567998	roo	8928	8	63	332	'61-2	64.99	11.7	5.0	intron	CR45347 +	chr2L_63_20565001	chr2L_20565001	0.97	RAL-340_100b
184	chr2L	20643347	20643427	F-element	4606	4584	10	80	'6-4	70.86	9.3	1.0	intergenic	phr6-4 -,CG17470 -	chr2L_10_20640001	chr2L_20640001	0.60	RAL-340_100b
185	chr2L	20719486	20719598	hobo	2937	9	29	112	'10-19	67.85	15.3	1.8	intergenic	not near genes	chr2L_29_20715001	chr2L_20715001	0.34	RAL-340_100b
186	chr2L	20817449	20817758	flea	5013	153	75	309	'31-44	65.85	7.3	9.0	intergenic	CheB38b -,CheB38a -	chr2L_75_20815001	chr2L_20815001	0.41	RAL-340_100b
187	chr2L	20840055	20840163	INE-1	164	127	4	108	'1-3	62.42	15.1	0.2	intergenic	not near genes	chr2L_4_20840001	chr2L_20840001	0.25	RAL-340_100b
188	chr2L	20911284	20911345	roo	9	9027	5	61	'3-2	70.53	17.1	0.3	intron,intron	CG43739 -,sky -	chr2L_5_20910001	chr2L_20910001	0.60	RAL-340_100b
189	chr2L	20935108	20935285	INE-1	550	542	8	177	'1-7	53.25	11.8	0.6	intergenic	not near genes	chr2L_8_20935001	chr2L_20935001	0.12	RAL-340_100b
190	chr2L	21000500	21000928	F-element	4355	4378	5	428	'4-1	71.75	20.9	0.2	intron	CG42238 -	chr2L_5_21000001	chr2L_21000001	0.80	RAL-340_100b
191	chr2L	21039477	21040013	FB	22	259	64	536	'29-35	66.00	16.0	3.8	intron	CG42238 -	chr2L_64_21035001	chr2L_21035001	0.45	RAL-340_100b
192	chr2L	21071964	21072154	INE-1	251	84	4	190	'3-1	75.31	16.7	0.2	intergenic	CG9265 -	chr2L_4_21070001	chr2L_21070001	0.75	RAL-340_100b
193	chr2L	21103620	21103683	Doc	343	308	4	63	'3-1	69.85	27.2	0.1	3` UTR,exon	CR43809 -,CG9257 +	chr2L_4_21100001	chr2L_21100001	0.75	RAL-340_100b
194	chr2L	21111701	21112017	1360	3371	1	74	316	'3-71	64.79	13.0	5.3	intron	Nhe2 +	chr2L_74_21110001	chr2L_21110001	0.04	RAL-340_100b
195	chr2L	21171099	21171185	F-element	4388	4249	5	86	'3-2	76.04	22.9	0.2	exon	Acon +	chr2L_5_21170001	chr2L_21170001	0.60	RAL-340_100b
196	chr2L	21201224	21201382	INE-1	550	535	6	158	'2-4	58.48	15.8	0.4	intergenic	CG31988 -	chr2L_6_21200001	chr2L_21200001	0.33	RAL-340_100b
197	chr2L	21232704	21232991	F-element	446	337	4	287	'1-3	66.46	30.7	0.1	exon	CG31626 -	chr2L_4_21230001	chr2L_21230001	0.25	RAL-340_100b
198	chr2L	21241419	21241569	INE-1	513	559	4	150	'3-1	70.18	15.5	0.2	intron	Hr39 +	chr2L_4_21240001	chr2L_21240001	0.75	RAL-340_100b
199	chr2L	21268001	21268232	INE-1	502	535	5	231	'3-2	68.91	8.0	0.6	intron	CG8671 +	chr2L_5_21265001	chr2L_21265001	0.60	RAL-340_100b
200	chr2L	21268538	21268621	baggins	5370	5343	5	83	'4-1	64.92	15.7	0.3	intron	CG8671 +	chr2L_5_21265001	chr2L_21265001	0.80	RAL-340_100b
201	chr2L	21272319	21272482	Cr1a	3972	3982	13	163	'11-2	60.62	12.2	1.0	intron	CG8671 +	chr2L_13_21270001	chr2L_21270001	0.85	RAL-340_100b
202	chr2L	21300220	21300318	INE-1	546	125	5	98	'3-2	72.46	19.0	0.2	intron	Mio -	chr2L_5_21300001	chr2L_21300001	0.60	RAL-340_100b
203	chr2L	21301849	21301996	INE-1	533	540	4	147	'3-1	69.17	12.1	0.3	intron	Mio -	chr2L_4_21300001	chr2L_21300001	0.75	RAL-340_100b
204	chr2L	21317809	21317907	INE-1	539	501	6	98	'4-2	66.61	16.0	0.4	intron	crc +	chr2L_6_21315001	chr2L_21315001	0.67	RAL-340_100b
205	chr2L	21335635	21335667	INE-1	545	576	4	32	'3-1	77.79	47.6	0.1	intron	dimm +	chr2L_4_21335001	chr2L_21335001	0.75	RAL-340_100b
206	chr2L	21338358	21338615	INE-1	18	549	4	257	'3-1	69.47	10.6	0.3	intron	dimm +	chr2L_4_21335001	chr2L_21335001	0.75	RAL-340_100b
207	chr2L	21362739	21363111	INE-1	570	85	9	372	'3-6	68.74	17.4	0.5	intron	dtr +	chr2L_9_21360001	chr2L_21360001	0.33	RAL-340_100b
208	chr2L	21370128	21370236	INE-1	570	256	4	108	'1-3	65.54	15.3	0.2	intergenic	Gr39b -	chr2L_4_21370001	chr2L_21370001	0.25	RAL-340_100b
209	chr2L	21377518	21377995	INE-1	131	542	11	477	'5-6	67.57	21.3	0.5	3` UTR	CG8665 +	chr2L_11_21375001	chr2L_21375001	0.45	RAL-340_100b
210	chr2L	21378454	21378740	flea	4755	248	42	286	'38-4	67.81	7.3	5.1	intergenic	CG8665 +	chr2L_42_21375001	chr2L_21375001	0.90	RAL-340_100b
211	chr2L	21393277	21393396	FB	26	94	12	119	'8-4	72.37	12.7	0.9	3` UTR	nrv3 +	chr2L_12_21390001	chr2L_21390001	0.67	RAL-340_100b
212	chr2L	21403522	21403561	G5	4394	4393	14	39	'8-6	59.97	3.9	2.9	intergenic	not near genes	chr2L_14_21400001	chr2L_21400001	0.57	RAL-340_100b
213	chr2L	21570228	21570289	Dm88	51	70	34	61	'21-13	66.98	7.6	4.0	intergenic	not near genes	chr2L_34_21570001	chr2L_21570001	0.62	RAL-340_100b
214	chr2L	21573036	21573315	1360	3339	3382	9	279	'7-2	65.37	16.0	0.5	intergenic	Lamp1 +	chr2L_9_21570001	chr2L_21570001	0.78	RAL-340_100b
215	chr2L	21575342	21575687	INE-1	537	529	5	345	'1-4	67.25	16.6	0.3	intron	Lamp1 +	chr2L_5_21575001	chr2L_21575001	0.20	RAL-340_100b
216	chr2L	21580807	21580872	INE-1	84	549	4	65	'2-2	66.61	24.8	0.2	intron	nompB -	chr2L_4_21580001	chr2L_21580001	0.50	RAL-340_100b
217	chr2L	21582160	21582262	INE-1	107	34	7	102	'3-4	73.88	16.8	0.4	intron	nompB -	chr2L_7_21580001	chr2L_21580001	0.43	RAL-340_100b
218	chr2L	21625074	21625340	INE-1	154	148	4	266	'2-2	71.58	13.8	0.3	5` UTR	CR43148 +	chr2L_4_21625001	chr2L_21625001	0.50	RAL-340_100b
219	chr2L	21629812	21630224	P-element	29	2868	21	412	'12-9	46.61	12.4	1.6	5` UTR	Df31 -	chr2L_21_21625001	chr2L_21625001	0.57	RAL-340_100b
220	chr2L	21666850	21666909	INE-1	344	144	4	59	'2-2	61.50	29.8	0.1	intron	CG2225 -	chr2L_4_21665001	chr2L_21665001	0.50	RAL-340_100b
221	chr2L	21673263	21673379	HB	1604	1497	9	116	'4-5	70.29	18.3	0.5	5` UTR	CG2225 -	chr2L_9_21670001	chr2L_21670001	0.44	RAL-340_100b
222	chr2L	21675120	21675229	HB	135	116	21	109	'7-14	51.43	21.2	0.9	intron	CG2225 -	chr2L_21_21675001	chr2L_21675001	0.33	RAL-340_100b
223	chr2L	21676481	21676576	HB	194	90	4	95	'2-2	71.18	18.6	0.2	intron	CG2225 -	chr2L_4_21675001	chr2L_21675001	0.50	RAL-340_100b
224	chr2L	21686403	21686512	transib2	127	2796	39	109	'21-18	67.73	15.3	2.4	intron	CG31619 +	chr2L_39_21685001	chr2L_21685001	0.54	RAL-340_100b
225	chr2L	21707786	21707839	FB	81	139	5	53	'4-1	69.86	20.5	0.2	intron	CG31619 +	chr2L_5_21705001	chr2L_21705001	0.80	RAL-340_100b
226	chr2L	21734817	21735026	Quasimodo	7357	7325	15	209	'7-8	68.49	5.3	2.4	intergenic	not near genes	chr2L_15_21730001	chr2L_21730001	0.47	RAL-340_100b
227	chr2L	21739389	21739470	INE-1	547	529	15	81	'2-13	64.70	17.1	0.8	intergenic	not near genes	chr2L_15_21735001	chr2L_21735001	0.13	RAL-340_100b
228	chr2L	21746046	21746202	1360	3368	3388	8	156	'7-1	70.19	15.6	0.5	intron	step -	chr2L_8_21745001	chr2L_21745001	0.88	RAL-340_100b
229	chr2L	21762373	21762415	INE-1	555	580	10	42	'4-6	65.37	6.5	1.3	3` UTR	CG31612 -	chr2L_10_21760001	chr2L_21760001	0.40	RAL-340_100b
230	chr2L	21769100	21769287	INE-1	535	539	4	187	'1-3	74.68	17.9	0.2	intron	CG31612 -	chr2L_4_21765001	chr2L_21765001	0.25	RAL-340_100b
231	chr2L	21781212	21781513	INE-1	568	81	5	301	'4-1	69.96	19.4	0.2	intron	CG31612 -	chr2L_5_21780001	chr2L_21780001	0.80	RAL-340_100b
232	chr2L	21788484	21788552	INE-1	553	570	4	68	'2-2	57.64	24.6	0.2	intron	CG31612 -	chr2L_4_21785001	chr2L_21785001	0.50	RAL-340_100b
233	chr2L	21795639	21795793	HB	4	200	4	154	'1-3	69.78	17.2	0.2	intergenic	CG31612 -	chr2L_4_21795001	chr2L_21795001	0.25	RAL-340_100b
234	chr2L	21797133	21797303	INE-1	83	15	7	170	'2-5	64.11	17.6	0.4	intergenic	not near genes	chr2L_7_21795001	chr2L_21795001	0.29	RAL-340_100b
235	chr2L	21850228	21850544	INE-1	556	546	6	316	'5-1	65.38	11.3	0.5	intergenic	not near genes	chr2L_6_21850001	chr2L_21850001	0.83	RAL-340_100b
236	chr2L	21875250	21875467	INE-1	130	127	4	217	'2-2	64.37	17.8	0.2	intergenic	not near genes	chr2L_4_21875001	chr2L_21875001	0.50	RAL-340_100b
237	chr2L	21900079	21900231	INE-1	580	550	6	152	'1-5	72.26	14.2	0.4	intergenic	not near genes	chr2L_6_21900001	chr2L_21900001	0.17	RAL-340_100b
238	chr2L	21911650	21911710	HB	1564	1499	5	60	'4-1	65.17	21.7	0.2	intergenic	not near genes	chr2L_5_21910001	chr2L_21910001	0.80	RAL-340_100b
239	chr2L	21913532	21913725	INE-1	253	562	4	193	'1-3	66.67	19.1	0.2	intergenic	not near genes	chr2L_4_21910001	chr2L_21910001	0.25	RAL-340_100b
240	chr2L	21930287	21930423	Copia1_DM	64	145	14	136	'11-3	73.33	20.9	0.6	intergenic	CR45334 +	chr2L_14_21930001	chr2L_21930001	0.79	RAL-340_100b
241	chr2L	21938771	21938857	INE-1	498	497	4	86	'2-2	60.57	16.3	0.2	intergenic	not near genes	chr2L_4_21935001	chr2L_21935001	0.50	RAL-340_100b
242	chr2L	21940598	21940710	INE-1	562	563	6	112	'3-3	68.33	28.0	0.2	intergenic	not near genes	chr2L_6_21940001	chr2L_21940001	0.50	RAL-340_100b
243	chr2L	21944339	21944367	INE-1	549	242	4	28	'2-2	73.98	40.8	0.1	intergenic	not near genes	chr2L_4_21940001	chr2L_21940001	0.50	RAL-340_100b
244	chr2L	22017783	22017969	INE-1	159	88	5	186	'2-3	67.38	11.1	0.4	intergenic	CG31693 +	chr2L_5_22015001	chr2L_22015001	0.40	RAL-340_100b
245	chr2L	22062808	22063150	INE-1	32	156	4	342	'2-2	68.29	14.8	0.3	intergenic	not near genes	chr2L_4_22060001	chr2L_22060001	0.50	RAL-340_100b
246	chr2L	22067173	22067201	INE-1	552	534	4	28	'2-2	68.19	27.5	0.1	intergenic	not near genes	chr2L_4_22065001	chr2L_22065001	0.50	RAL-340_100b
247	chr2L	22082380	22082792	INE-1	91	545	4	412	'1-3	63.97	11.7	0.3	intergenic	not near genes	chr2L_4_22080001	chr2L_22080001	0.25	RAL-340_100b
248	chr2L	22090728	22090912	G4	3775	3699	8	184	'5-3	72.80	13.8	0.5	intergenic	not near genes	chr2L_8_22090001	chr2L_22090001	0.62	RAL-340_100b
249	chr2L	22092908	22093198	INE-1	542	548	15	290	'13-2	57.73	9.8	1.4	intergenic	not near genes	chr2L_15_22090001	chr2L_22090001	0.87	RAL-340_100b
250	chr2L	22095355	22095387	INE-1	499	541	4	32	'2-2	65.45	13.8	0.3	intergenic	not near genes	chr2L_4_22095001	chr2L_22095001	0.50	RAL-340_100b
251	chr2L	22114883	22114958	1360	374	395	6	75	'4-2	67.56	20.6	0.3	intergenic	not near genes	chr2L_6_22110001	chr2L_22110001	0.67	RAL-340_100b
252	chr2L	22121227	22121348	I-element	5300	5342	5	121	'3-2	69.62	10.0	0.5	intergenic	not near genes	chr2L_5_22120001	chr2L_22120001	0.60	RAL-340_100b
253	chr2L	22130722	22130914	INE-1	533	579	6	192	'3-3	81.11	10.9	0.5	intergenic	CR43241 +	chr2L_6_22130001	chr2L_22130001	0.50	RAL-340_100b
254	chr2L	22133422	22133523	S-element	1539	126	6	101	'3-3	63.91	12.1	0.5	intergenic	not near genes	chr2L_6_22130001	chr2L_22130001	0.50	RAL-340_100b
255	chr2L	22133862	22133992	S-element	126	1621	6	130	'5-1	73.56	11.6	0.5	intergenic	CG42748 +	chr2L_6_22130001	chr2L_22130001	0.83	RAL-340_100b
256	chr2L	22136610	22136672	INE-1	137	19	12	62	'11-1	74.39	10.6	1.0	intron	CG42748 +	chr2L_12_22135001	chr2L_22135001	0.92	RAL-340_100b
257	chr2L	22163838	22163979	INE-1	564	543	7	141	'3-4	70.93	18.5	0.4	3` UTR	CG42748 +	chr2L_7_22160001	chr2L_22160001	0.43	RAL-340_100b
258	chr2L	22172857	22172890	Cr1a	4280	4301	4	33	'2-2	67.87	31.8	0.1	intergenic	not near genes	chr2L_4_22170001	chr2L_22170001	0.50	RAL-340_100b
259	chr2L	22193334	22193441	INE-1	10	95	5	107	'1-4	73.14	22.5	0.2	intron	Ir40a -	chr2L_5_22190001	chr2L_22190001	0.20	RAL-340_100b
260	chr2L	22211205	22211546	INE-1	541	374	21	341	'7-14	72.83	22.1	0.9	intron	Ir40a -	chr2L_21_22210001	chr2L_22210001	0.33	RAL-340_100b
261	chr2L	22215895	22216104	diver2	329	4736	13	209	'4-9	66.33	9.0	1.3	intergenic	not near genes	chr2L_13_22215001	chr2L_22215001	0.31	RAL-340_100b
262	chr2L	22225080	22225255	G5	4789	4764	4	175	'2-2	77.42	12.6	0.3	intergenic	not near genes	chr2L_4_22225001	chr2L_22225001	0.50	RAL-340_100b
263	chr2L	22244966	22245204	Doc	16	4682	25	238	'4-21	64.72	14.6	1.6	3` UTR	CG3262 +	chr2L_25_22240001	chr2L_22240001	0.16	RAL-340_100b
264	chr2L	22250731	22250900	FB	7	105	4	169	'3-1	65.19	16.0	0.2	exon	Tif-IA +	chr2L_4_22250001	chr2L_22250001	0.75	RAL-340_100b
265	chr2L	22254961	22255160	I-element	4965	5033	4	199	'2-2	67.75	16.1	0.2	intron	Tif-IA +	chr2L_4_22250001	chr2L_22250001	0.50	RAL-340_100b
266	chr2L	22304646	22304698	G5	4691	4683	6	52	'5-1	73.77	18.1	0.3	intergenic	not near genes	chr2L_6_22300001	chr2L_22300001	0.83	RAL-340_100b
267	chr2L	22326797	22327176	Cr1a	4238	4185	7	379	'6-1	67.47	13.0	0.5	intron	CG17018 +	chr2L_7_22325001	chr2L_22325001	0.86	RAL-340_100b
268	chr2L	22329044	22329122	invader2	230	197	9	78	'5-4	69.80	23.8	0.4	intron	CG17018 +	chr2L_9_22325001	chr2L_22325001	0.56	RAL-340_100b
269	chr2L	22342502	22342720	G4	3548	3620	24	218	'13-11	70.19	10.6	2.1	intron	CG17018 +	chr2L_24_22340001	chr2L_22340001	0.54	RAL-340_100b
270	chr2L	22369265	22369339	INE-1	118	20	4	74	'3-1	67.00	10.3	0.4	intergenic	CG17018 +	chr2L_4_22365001	chr2L_22365001	0.75	RAL-340_100b
271	chr2L	22392132	22392225	HMS-Beagle	7020	197	20	93	'2-18	67.13	11.9	1.6	intergenic	not near genes	chr2L_20_22390001	chr2L_22390001	0.10	RAL-340_100b
272	chr2L	22445985	22446028	HMS-Beagle2	59	374	4	43	'2-2	73.64	23.3	0.2	intergenic	not near genes	chr2L_4_22445001	chr2L_22445001	0.50	RAL-340_100b
273	chr2L	22445986	22446026	Doc	130	4670	6	40	'1-5	71.56	24.4	0.2	intergenic	not near genes	chr2L_6_22445001	chr2L_22445001	0.17	RAL-340_100b
274	chr2L	22490461	22490530	invader1	3916	3863	22	69	'9-13	70.98	10.0	2.0	intergenic	not near genes	chr2L_22_22490001	chr2L_22490001	0.41	RAL-340_100b
275	chr2L	22497639	22497818	1360	57	2	4	179	'1-3	63.34	8.6	0.4	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.25	RAL-340_100b
276	chr2L	22497641	22497831	invader1	3960	123	41	190	'22-19	67.85	8.2	4.5	intergenic	not near genes	chr2L_41_22495001	chr2L_22495001	0.54	RAL-340_100b
277	chr2L	22497746	22497837	HMS-Beagle2	49	51	4	91	'2-2	62.28	8.1	0.4	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.50	RAL-340_100b
278	chr2L	22551737	22551776	1360	3366	3344	6	39	'1-5	65.17	29.0	0.2	3` UTR	CG17493 +	chr2L_6_22550001	chr2L_22550001	0.17	RAL-340_100b
279	chr2L	22557712	22557830	Doc2-element	4701	4744	7	118	'6-1	64.50	22.7	0.3	intergenic	not near genes	chr2L_7_22555001	chr2L_22555001	0.86	RAL-340_100b
280	chr2L	22559372	22559599	Cr1a	4052	4015	6	227	'3-3	66.34	11.4	0.5	intergenic	not near genes	chr2L_6_22555001	chr2L_22555001	0.50	RAL-340_100b
281	chr2L	22629679	22629790	1360	3330	3239	4	111	'2-2	73.51	21.0	0.2	intron	CG40006 -	chr2L_4_22625001	chr2L_22625001	0.50	RAL-340_100b
282	chr2L	22630962	22631017	1360	34	161	4	55	'3-1	70.98	37.7	0.1	intron	CG40006 -	chr2L_4_22630001	chr2L_22630001	0.75	RAL-340_100b
283	chr2L	22632040	22632357	roo	401	62	44	317	'16-28	67.35	13.1	3.1	intron	CG40006 -	chr2L_44_22630001	chr2L_22630001	0.36	RAL-340_100b
284	chr2L	22640096	22640257	invader4	114	3013	5	161	'4-1	70.37	10.7	0.4	intron	CG40006 -	chr2L_5_22640001	chr2L_22640001	0.80	RAL-340_100b
285	chr2L	22663340	22663444	Cr1a	4214	4285	6	104	'4-2	68.02	14.0	0.4	intron	CG40006 -	chr2L_6_22660001	chr2L_22660001	0.67	RAL-340_100b
286	chr2L	22684601	22684784	F-element	4502	4664	5	183	'3-2	69.65	16.1	0.3	intron	CG40006 -	chr2L_5_22680001	chr2L_22680001	0.60	RAL-340_100b
287	chr2L	22687842	22687996	transib3	128	146	7	154	'4-3	70.40	15.1	0.4	intron	CG40006 -	chr2L_7_22685001	chr2L_22685001	0.57	RAL-340_100b
288	chr2L	22707152	22707326	Cr1a	4209	4162	4	174	'2-2	68.93	19.1	0.2	intron	CG40006 -	chr2L_4_22705001	chr2L_22705001	0.50	RAL-340_100b
289	chr2L	22748563	22749017	Tc3	1618	469	11	454	'1-10	69.46	13.5	0.8	intron	CG40006 -	chr2L_11_22745001	chr2L_22745001	0.09	RAL-340_100b
290	chr2L	22749335	22749504	Tc3	1621	403	4	169	'2-2	66.36	14.5	0.3	intron	CG40006 -	chr2L_4_22745001	chr2L_22745001	0.50	RAL-340_100b
291	chr2L	22749945	22750509	Tc3	1443	1503	17	564	'3-14	70.00	8.7	1.8	intron	CG40006 -	chr2L_17_22745001	chr2L_22745001	0.18	RAL-340_100b
292	chr2L	22757322	22757529	S-element	68	1692	37	207	'3-34	65.21	7.4	4.4	intergenic	not near genes	chr2L_37_22755001	chr2L_22755001	0.08	RAL-340_100b
293	chr2L	22775557	22775600	INE-1	536	550	4	43	'3-1	69.48	31.5	0.1	intergenic	not near genes	chr2L_4_22775001	chr2L_22775001	0.75	RAL-340_100b
294	chr2L	22968128	22968269	1360	3244	3333	5	141	'4-1	66.48	17.7	0.3	intergenic	not near genes	chr2L_5_22965001	chr2L_22965001	0.80	RAL-340_100b
295	chr2L	22993403	22993621	1360	47	55	5	218	'2-3	63.69	17.3	0.3	intergenic	cta +	chr2L_5_22990001	chr2L_22990001	0.40	RAL-340_100b
296	chr2L	22995589	22995661	INE-1	122	28	4	72	'3-1	71.72	21.1	0.2	intergenic	not near genes	chr2L_4_22995001	chr2L_22995001	0.75	RAL-340_100b
297	chr2L	22997363	22997821	INE-1	90	85	8	458	'6-2	71.50	17.0	0.4	intergenic	not near genes	chr2L_8_22995001	chr2L_22995001	0.75	RAL-340_100b
298	chr2L	22998767	22998805	Cr1a	4030	4004	4	38	'1-3	74.86	30.2	0.1	intergenic	not near genes	chr2L_4_22995001	chr2L_22995001	0.25	RAL-340_100b
299	chr2L	22999276	22999455	Cr1a	4042	4259	8	179	'4-4	69.09	16.7	0.5	intergenic	Cht3 -	chr2L_8_22995001	chr2L_22995001	0.50	RAL-340_100b
300	chr2L	23033481	23034001	1360	20	420	8	520	'6-2	67.11	16.0	0.5	intergenic	not near genes	chr2L_8_23030001	chr2L_23030001	0.75	RAL-340_100b
301	chr2L	23041055	23041188	1360	3334	434	4	133	'2-2	67.36	19.6	0.2	intergenic	not near genes	chr2L_4_23040001	chr2L_23040001	0.50	RAL-340_100b
302	chr2L	23066288	23066428	1360	304	299	4	140	'1-3	70.23	11.7	0.3	intergenic	not near genes	chr2L_4_23065001	chr2L_23065001	0.25	RAL-340_100b
303	chr2L	23066782	23066963	1360	3344	13	10	181	'4-6	62.34	19.9	0.5	intergenic	Spf45 -	chr2L_10_23065001	chr2L_23065001	0.40	RAL-340_100b
304	chr2L	23075088	23075321	INE-1	77	556	6	233	'2-4	74.95	14.7	0.4	intergenic	not near genes	chr2L_6_23075001	chr2L_23075001	0.33	RAL-340_100b
305	chr2L	23075565	23075832	invader4	2771	80	8	267	'7-1	68.28	13.7	0.5	intergenic	not near genes	chr2L_8_23075001	chr2L_23075001	0.88	RAL-340_100b
306	chr2L	23136267	23136315	aurora-element	4170	6	4	48	'3-1	67.05	20.3	0.2	intergenic	not near genes	chr2L_4_23135001	chr2L_23135001	0.75	RAL-340_100b
307	chr2L	23163809	23164153	1360	3366	484	8	344	'6-2	65.76	15.1	0.5	intron	CG12567 -	chr2L_8_23160001	chr2L_23160001	0.75	RAL-340_100b
308	chr2L	23168730	23169073	Tirant	8466	8233	35	343	'1-34	69.90	7.8	4.0	intron	CG12567 -	chr2L_35_23165001	chr2L_23165001	0.03	RAL-340_100b
309	chr2L	23170736	23170876	1360	63	53	4	140	'2-2	71.78	19.3	0.2	intron	CG12567 -	chr2L_4_23170001	chr2L_23170001	0.50	RAL-340_100b
310	chr2L	23178997	23179090	diver2	329	268	9	93	'6-3	71.39	15.2	0.6	intergenic	not near genes	chr2L_9_23175001	chr2L_23175001	0.67	RAL-340_100b
311	chr2L	23179003	23179162	Tc1	189	56	5	159	'2-3	70.55	14.0	0.3	intergenic	not near genes	chr2L_5_23175001	chr2L_23175001	0.40	RAL-340_100b
312	chr2L	23179594	23179627	diver2	47	94	4	33	'3-1	67.29	30.7	0.1	intergenic	not near genes	chr2L_4_23175001	chr2L_23175001	0.75	RAL-340_100b
313	chr2L	23181277	23181402	INE-1	154	21	4	125	'2-2	61.87	19.7	0.2	intergenic	not near genes	chr2L_4_23180001	chr2L_23180001	0.50	RAL-340_100b
314	chr2L	23233883	23233999	1360	3344	3215	7	116	'6-1	72.65	19.0	0.3	intergenic	not near genes	chr2L_7_23230001	chr2L_23230001	0.86	RAL-340_100b
315	chr2L	23295811	23295889	micropia	5436	4	24	78	'7-17	61.19	10.3	2.1	intergenic	not near genes	chr2L_24_23295001	chr2L_23295001	0.29	RAL-340_100b
316	chr2L	23488783	23489056	Circe	7040	60	8	273	'7-1	66.16	9.5	0.8	intergenic	not near genes	chr2L_8_23485001	chr2L_23485001	0.88	RAL-340_100b
317	chr2L	23506307	23506336	Max-element	383	473	7	29	'3-4	74.55	25.4	0.3	intergenic	not near genes	chr2L_7_23505001	chr2L_23505001	0.43	RAL-340_100b
318	chr2R	78192	78443	F-element	4346	4620	4	251	'2-2	69.49	10.1	0.4	intergenic	not near genes	chr2R_4_75001	chr2R_75001	0.50	RAL-340_100b
319	chr2R	167144	167187	Bari1	131	249	4	43	'1-3	70.00	18.8	0.2	intergenic	not near genes	chr2R_4_165001	chr2R_165001	0.25	RAL-340_100b
320	chr2R	290908	291082	Bari1	1509	1671	4	174	'3-1	71.27	8.8	0.4	intergenic	not near genes	chr2R_4_290001	chr2R_290001	0.75	RAL-340_100b
321	chr2R	329972	330222	HMS-Beagle2	294	6892	35	250	'3-32	67.96	5.5	5.4	intergenic	not near genes	chr2R_35_325001	chr2R_325001	0.09	RAL-340_100b
322	chr2R	387155	387271	baggins	259	104	4	116	'1-3	67.55	7.9	0.4	intergenic	not near genes	chr2R_4_385001	chr2R_385001	0.25	RAL-340_100b
323	chr2R	402072	402267	transib3	146	299	5	195	'2-3	65.05	6.6	0.7	intergenic	not near genes	chr2R_5_400001	chr2R_400001	0.40	RAL-340_100b
324	chr2R	491949	491978	X-element	115	95	4	29	'3-1	67.64	17.7	0.2	intergenic	not near genes	chr2R_4_490001	chr2R_490001	0.75	RAL-340_100b
325	chr2R	508406	508599	Dm88	303	305	4	193	'2-2	73.21	7.8	0.5	intron	CG40378 +	chr2R_4_505001	chr2R_505001	0.50	RAL-340_100b
326	chr2R	545123	545172	INE-1	15	577	4	49	'2-2	63.25	10.3	0.4	intron	CG40378 +	chr2R_4_545001	chr2R_545001	0.50	RAL-340_100b
327	chr2R	545171	545204	Stalker4	249	17	13	33	'12-1	72.32	14.3	0.8	intron	CG40378 +	chr2R_13_545001	chr2R_545001	0.92	RAL-340_100b
328	chr2R	559045	559209	Ivk	42	179	4	164	'2-2	68.51	9.0	0.4	intron	CG40378 +	chr2R_4_555001	chr2R_555001	0.50	RAL-340_100b
329	chr2R	579511	579620	I-element	5317	5315	10	109	'9-1	66.11	8.6	1.0	intron	CG40378 +	chr2R_10_575001	chr2R_575001	0.90	RAL-340_100b
330	chr2R	642318	642490	F-element	4601	32	14	172	'3-11	62.40	5.7	2.1	exon	CG40378 +	chr2R_14_640001	chr2R_640001	0.21	RAL-340_100b
331	chr2R	650968	651034	1360	46	3372	7	66	'2-5	68.98	21.6	0.3	intergenic	not near genes	chr2R_7_650001	chr2R_650001	0.29	RAL-340_100b
332	chr2R	870706	870752	Porto1	4464	4462	16	46	'5-11	67.61	120.3	0.1	intergenic	not near genes	chr2R_16_870001	chr2R_870001	0.31	RAL-340_100b
333	chr2R	892278	892512	gypsy2	6750	476	5	234	'3-2	66.69	10.2	0.4	intergenic	not near genes	chr2R_5_890001	chr2R_890001	0.60	RAL-340_100b
334	chr2R	946997	947060	1360	169	48	4	63	'1-3	71.42	24.0	0.2	intron	CG40498 -	chr2R_4_945001	chr2R_945001	0.25	RAL-340_100b
335	chr2R	949560	949774	1360	30	3367	5	214	'3-2	72.54	15.6	0.3	intron	CG40498 -	chr2R_5_945001	chr2R_945001	0.60	RAL-340_100b
336	chr2R	973736	973911	Cr1a	153	180	7	175	'1-6	70.17	8.7	0.7	intergenic	not near genes	chr2R_7_970001	chr2R_970001	0.14	RAL-340_100b
337	chr2R	979472	979551	Porto1	252	259	4	79	'2-2	74.89	23.5	0.2	intergenic	not near genes	chr2R_4_975001	chr2R_975001	0.50	RAL-340_100b
338	chr2R	981616	982060	1360	3350	3245	8	444	'7-1	62.82	10.6	0.7	intergenic	not near genes	chr2R_8_980001	chr2R_980001	0.88	RAL-340_100b
339	chr2R	987403	987460	Doc	186	69	8	57	'5-3	66.99	9.8	0.7	intergenic	not near genes	chr2R_8_985001	chr2R_985001	0.62	RAL-340_100b
340	chr2R	1074244	1074639	INE-1	31	17	4	395	'2-2	68.59	15.3	0.2	intron	rl +	chr2R_4_1070001	chr2R_1070001	0.50	RAL-340_100b
341	chr2R	1076460	1076671	FB	46	80	6	211	'5-1	69.23	14.6	0.4	intron	rl +	chr2R_6_1075001	chr2R_1075001	0.83	RAL-340_100b
342	chr2R	1079775	1079842	Tc1	58	55	4	67	'2-2	69.29	19.1	0.2	intron	rl +	chr2R_4_1075001	chr2R_1075001	0.50	RAL-340_100b
343	chr2R	1089801	1090031	Transpac	305	110	39	230	'32-7	65.76	10.7	3.3	intron	rl +	chr2R_39_1085001	chr2R_1085001	0.82	RAL-340_100b
344	chr2R	1094636	1094687	1360	90	3338	4	51	'1-3	65.93	29.7	0.1	intron	rl +	chr2R_4_1090001	chr2R_1090001	0.25	RAL-340_100b
345	chr2R	1105934	1106119	1360	190	3350	13	185	'8-5	68.97	18.7	0.7	exon	rl +	chr2R_13_1105001	chr2R_1105001	0.62	RAL-340_100b
346	chr2R	1277155	1277519	Gypsy6A_LTR	233	229	4	364	'3-1	73.85	14.3	0.3	intergenic	not near genes	chr2R_4_1275001	chr2R_1275001	0.75	RAL-340_100b
347	chr2R	1320658	1320708	diver2	4695	4853	36	50	'20-16	60.93	37.0	0.9	intergenic	not near genes	chr2R_36_1320001	chr2R_1320001	0.56	RAL-340_100b
348	chr2R	1343382	1343419	FB	614	730	6	37	'5-1	67.65	23.0	0.2	intergenic	Yeti -	chr2R_6_1340001	chr2R_1340001	0.83	RAL-340_100b
349	chr2R	1365094	1365138	297	209	250	4	44	'2-2	74.87	20.0	0.2	intron	l(2)41Ab +	chr2R_4_1365001	chr2R_1365001	0.50	RAL-340_100b
350	chr2R	1410799	1410889	1360	56	155	4	90	'2-2	70.03	50.8	0.1	intron	l(2)41Ab +	chr2R_4_1410001	chr2R_1410001	0.50	RAL-340_100b
351	chr2R	1411814	1412045	Porto1	172	280	10	231	'2-8	68.06	22.4	0.4	intron	l(2)41Ab +	chr2R_10_1410001	chr2R_1410001	0.20	RAL-340_100b
352	chr2R	1478376	1478506	17.6	243	7186	4	130	'2-2	61.02	19.2	0.2	intergenic	not near genes	chr2R_4_1475001	chr2R_1475001	0.50	RAL-340_100b
353	chr2R	1485513	1485593	gypsy6	7599	7582	5	80	'2-3	71.25	11.3	0.4	intergenic	not near genes	chr2R_5_1485001	chr2R_1485001	0.40	RAL-340_100b
354	chr2R	1509876	1509943	1360	3215	40	6	67	'2-4	73.64	22.9	0.3	intergenic	not near genes	chr2R_6_1505001	chr2R_1505001	0.33	RAL-340_100b
355	chr2R	1512894	1512944	1360	3188	3227	6	50	'4-2	60.02	50.1	0.1	3` UTR	Maf1 -	chr2R_6_1510001	chr2R_1510001	0.67	RAL-340_100b
356	chr2R	1521514	1521695	FB	7	241	4	181	'3-1	66.58	20.4	0.2	5` UTR	Maf1 -	chr2R_4_1520001	chr2R_1520001	0.75	RAL-340_100b
357	chr2R	1522952	1523232	FB	682	722	95	280	'89-6	68.37	63.2	1.5	intron	Maf1 -	chr2R_95_1520001	chr2R_1520001	0.94	RAL-340_100b
358	chr2R	1523278	1523353	S-element	1618	1603	5	75	'2-3	64.96	69.2	0.1	intron	Maf1 -	chr2R_5_1520001	chr2R_1520001	0.40	RAL-340_100b
359	chr2R	1523363	1523394	INE-1	136	89	4	31	'3-1	73.94	73.0	0.1	intron	Maf1 -	chr2R_4_1520001	chr2R_1520001	0.75	RAL-340_100b
360	chr2R	1527136	1527280	S-element	1706	1472	6	144	'3-3	71.13	9.9	0.6	intergenic	Maf1 -	chr2R_6_1525001	chr2R_1525001	0.50	RAL-340_100b
361	chr2R	1578194	1578313	Tc1-2	95	37	5	119	'4-1	70.45	19.0	0.2	intergenic	not near genes	chr2R_5_1575001	chr2R_1575001	0.80	RAL-340_100b
362	chr2R	1579738	1579930	baggins	5092	5007	5	192	'2-3	74.68	14.1	0.3	intergenic	not near genes	chr2R_5_1575001	chr2R_1575001	0.40	RAL-340_100b
363	chr2R	1590126	1590180	S-element	1533	1603	5	54	'2-3	68.43	16.1	0.3	intergenic	CG17691 +	chr2R_5_1590001	chr2R_1590001	0.40	RAL-340_100b
364	chr2R	1591990	1592175	1360	3337	8	6	185	'5-1	68.86	14.9	0.4	intron	CG17691 +	chr2R_6_1590001	chr2R_1590001	0.83	RAL-340_100b
365	chr2R	1592056	1592557	S-element	1670	118	8	501	'6-2	69.21	8.8	0.8	intron	CG17691 +	chr2R_8_1590001	chr2R_1590001	0.75	RAL-340_100b
366	chr2R	1593216	1593480	1360	3247	3283	4	264	'2-2	71.62	22.7	0.2	intron	CG17691 +	chr2R_4_1590001	chr2R_1590001	0.50	RAL-340_100b
367	chr2R	1596608	1596659	Tabor	7309	474	4	51	'1-3	71.94	13.2	0.3	intergenic	CG17691 +	chr2R_4_1595001	chr2R_1595001	0.25	RAL-340_100b
368	chr2R	1600629	1600664	Cr1a	4237	4219	4	35	'2-2	72.34	28.3	0.1	intergenic	not near genes	chr2R_4_1600001	chr2R_1600001	0.50	RAL-340_100b
369	chr2R	1650464	1650631	Tc1-2	4	171	17	167	'2-15	69.77	14.9	1.1	intron	CG41520 +	chr2R_17_1650001	chr2R_1650001	0.12	RAL-340_100b
370	chr2R	1655266	1655339	Q-element	181	143	4	73	'3-1	74.91	16.2	0.2	intron	CG41520 +	chr2R_4_1655001	chr2R_1655001	0.75	RAL-340_100b
371	chr2R	1726336	1726405	INE-1	538	571	4	69	'1-3	58.82	16.7	0.2	intron	CG41520 +	chr2R_4_1725001	chr2R_1725001	0.25	RAL-340_100b
372	chr2R	1751149	1751260	INE-1	135	371	16	111	'1-15	72.96	11.3	1.3	intron	CG41520 +	chr2R_16_1750001	chr2R_1750001	0.06	RAL-340_100b
373	chr2R	1868856	1868963	Cr1a	4323	4210	7	107	'4-3	70.27	10.8	0.6	intron	CG17684 -	chr2R_7_1865001	chr2R_1865001	0.57	RAL-340_100b
374	chr2R	1873398	1873434	TLD2_LTR	161	43	4	36	'2-2	71.71	11.9	0.3	intron	CG17684 -	chr2R_4_1870001	chr2R_1870001	0.50	RAL-340_100b
375	chr2R	1880412	1880688	1360	55	3387	13	276	'12-1	67.57	30.4	0.4	intron	CG17684 -	chr2R_13_1880001	chr2R_1880001	0.92	RAL-340_100b
376	chr2R	1916328	1916475	Juan	4135	10	6	147	'4-2	69.52	6.1	0.8	intron	CG17684 -	chr2R_6_1915001	chr2R_1915001	0.67	RAL-340_100b
377	chr2R	1982130	1982173	1360	3253	3170	16	43	'1-15	69.94	19.1	0.8	intron	CG17684 -	chr2R_16_1980001	chr2R_1980001	0.06	RAL-340_100b
378	chr2R	2009282	2009430	I-element	120	41	17	148	'4-13	71.97	6.8	2.2	intron	CG17684 -	chr2R_17_2005001	chr2R_2005001	0.24	RAL-340_100b
379	chr2R	2050408	2050459	hopper	1407	1323	5	51	'1-4	71.05	11.1	0.4	intron	CG17684 -	chr2R_5_2050001	chr2R_2050001	0.20	RAL-340_100b
380	chr2R	2054442	2054578	S2	1446	1437	4	136	'3-1	72.05	8.3	0.4	intron	CG17684 -	chr2R_4_2050001	chr2R_2050001	0.75	RAL-340_100b
381	chr2R	2077300	2077397	X-element	127	51	4	97	'2-2	74.40	15.5	0.2	intron	CG17684 -	chr2R_4_2075001	chr2R_2075001	0.50	RAL-340_100b
382	chr2R	2092824	2092883	Doc3-element	128	30	8	59	'7-1	69.20	13.2	0.6	intron	CG17684 -	chr2R_8_2090001	chr2R_2090001	0.88	RAL-340_100b
383	chr2R	2176250	2176357	Tirant	8485	8107	26	107	'16-10	66.63	13.1	1.8	intron	CG17684 -	chr2R_26_2175001	chr2R_2175001	0.62	RAL-340_100b
384	chr2R	2184510	2184557	Gypsy6A_LTR	196	185	5	47	'3-2	69.53	26.6	0.2	intron	CG17684 -	chr2R_5_2180001	chr2R_2180001	0.60	RAL-340_100b
385	chr2R	2248339	2248520	1360	3170	3204	6	181	'5-1	64.88	12.8	0.4	intron	CG17684 -	chr2R_6_2245001	chr2R_2245001	0.83	RAL-340_100b
386	chr2R	2256352	2256513	1360	3213	9	8	161	'3-5	71.97	9.0	0.8	intron	CG17684 -	chr2R_8_2255001	chr2R_2255001	0.38	RAL-340_100b
387	chr2R	2308085	2308249	1360	3283	3247	4	164	'2-2	71.62	10.9	0.3	intergenic	not near genes	chr2R_4_2305001	chr2R_2305001	0.50	RAL-340_100b
388	chr2R	2457357	2457460	1360	1	2	4	103	'2-2	63.28	0.0	4.0	intergenic	not near genes	chr2R_4_2455001	chr2R_2455001	0.50	RAL-340_100b
389	chr2R	2496109	2496171	hobo	238	232	4	62	'2-2	74.90	9.6	0.4	intron	MFS17 -	chr2R_4_2495001	chr2R_2495001	0.50	RAL-340_100b
390	chr2R	2498490	2498652	1360	134	2	5	162	'2-3	63.87	14.5	0.3	intron	MFS17 -	chr2R_5_2495001	chr2R_2495001	0.40	RAL-340_100b
391	chr2R	2514389	2514441	Doc2-element	4745	4698	5	52	'2-3	72.20	24.3	0.2	intron	MFS17 -	chr2R_5_2510001	chr2R_2510001	0.40	RAL-340_100b
392	chr2R	2519414	2519557	transib3	2674	2857	7	143	'1-6	64.11	10.6	0.6	intron	MFS17 -	chr2R_7_2515001	chr2R_2515001	0.14	RAL-340_100b
393	chr2R	2555696	2555772	INE-1	171	260	8	76	'7-1	53.30	14.1	0.5	intron	MFS17 -	chr2R_8_2555001	chr2R_2555001	0.88	RAL-340_100b
394	chr2R	2564277	2564419	1360	250	3381	11	142	'8-3	71.18	17.3	0.6	intron	MFS17 -	chr2R_11_2560001	chr2R_2560001	0.73	RAL-340_100b
395	chr2R	2589991	2590020	Transpac	4918	4922	8	29	'3-5	60.57	14.2	0.5	intergenic	not near genes	chr2R_8_2585001	chr2R_2585001	0.38	RAL-340_100b
396	chr2R	2643740	2643807	roo	8752	84	5	67	'1-4	69.89	5.6	0.8	intergenic	not near genes	chr2R_5_2640001	chr2R_2640001	0.20	RAL-340_100b
397	chr2R	2678508	2678560	opus	471	7496	38	52	'17-21	67.42	9.6	3.6	intergenic	not near genes	chr2R_38_2675001	chr2R_2675001	0.45	RAL-340_100b
398	chr2R	2745194	2745243	Stalker2	7469	18	4	49	'3-1	63.15	21.1	0.2	intergenic	not near genes	chr2R_4_2745001	chr2R_2745001	0.75	RAL-340_100b
399	chr2R	2769499	2769623	invader2	306	302	6	124	'5-1	67.94	24.6	0.2	intergenic	not near genes	chr2R_6_2765001	chr2R_2765001	0.83	RAL-340_100b
400	chr2R	2830841	2831062	1360	3387	3180	5	221	'2-3	73.95	17.2	0.3	exon	CG41378 -	chr2R_5_2830001	chr2R_2830001	0.40	RAL-340_100b
401	chr2R	2832292	2832451	1360	13	3386	12	159	'7-5	73.03	20.8	0.6	intron	CG41378 -	chr2R_12_2830001	chr2R_2830001	0.58	RAL-340_100b
402	chr2R	2843143	2843376	1360	3335	3386	9	233	'5-4	68.00	17.2	0.5	intron	CG41378 -	chr2R_9_2840001	chr2R_2840001	0.56	RAL-340_100b
403	chr2R	2846451	2846493	Tc1-2	71	43	5	42	'4-1	72.45	22.5	0.2	intron	CG41378 -	chr2R_5_2845001	chr2R_2845001	0.80	RAL-340_100b
404	chr2R	2875183	2875360	TLD2_LTR	97	71	8	177	'6-2	66.99	12.3	0.6	intergenic	not near genes	chr2R_8_2875001	chr2R_2875001	0.75	RAL-340_100b
405	chr2R	2879431	2879480	Stalker	6939	6988	5	49	'2-3	60.93	43.6	0.1	intergenic	not near genes	chr2R_5_2875001	chr2R_2875001	0.40	RAL-340_100b
406	chr2R	2879431	2879488	Stalker4	7049	7103	8	57	'2-6	64.11	40.2	0.2	intergenic	not near genes	chr2R_8_2875001	chr2R_2875001	0.25	RAL-340_100b
407	chr2R	2879962	2880060	TLD2_LTR	42	138	69	98	'33-36	70.09	5.8	10.1	intergenic	not near genes	chr2R_69_2875001	chr2R_2875001	0.48	RAL-340_100b
408	chr2R	2948087	2948245	mariner2	88	219	5	158	'4-1	70.37	11.8	0.4	intron	Scp1 -	chr2R_5_2945001	chr2R_2945001	0.80	RAL-340_100b
409	chr2R	2953938	2954005	INE-1	501	507	4	67	'3-1	64.03	16.0	0.2	intron	Scp1 -	chr2R_4_2950001	chr2R_2950001	0.75	RAL-340_100b
410	chr2R	2961484	2961655	S2	1483	1656	5	171	'4-1	70.68	11.4	0.4	intron	Scp1 -	chr2R_5_2960001	chr2R_2960001	0.80	RAL-340_100b
411	chr2R	2980305	2980333	1360	3182	3379	7	28	'5-2	71.92	32.2	0.2	intergenic	not near genes	chr2R_7_2980001	chr2R_2980001	0.71	RAL-340_100b
412	chr2R	3120305	3120438	1360	3287	3260	8	133	'3-5	69.30	8.8	0.8	intron	CG42596 +	chr2R_8_3120001	chr2R_3120001	0.38	RAL-340_100b
413	chr2R	3130274	3130442	Tc1	1636	1518	9	168	'2-7	69.85	12.8	0.7	intron	CG42596 +	chr2R_9_3130001	chr2R_3130001	0.22	RAL-340_100b
414	chr2R	3141343	3141490	transib1	273	226	6	147	'2-4	73.87	10.7	0.5	intron	CG42596 +	chr2R_6_3140001	chr2R_3140001	0.33	RAL-340_100b
415	chr2R	3146324	3146484	rover	182	7241	22	160	'17-5	72.49	9.2	2.2	intron	CG42596 +	chr2R_22_3145001	chr2R_3145001	0.77	RAL-340_100b
416	chr2R	3162020	3162170	diver2	403	334	5	150	'4-1	72.41	11.8	0.4	intron	CG42596 +	chr2R_5_3160001	chr2R_3160001	0.80	RAL-340_100b
417	chr2R	3170922	3171066	1360	3319	158	4	144	'3-1	74.40	13.4	0.3	intron	CG42596 +	chr2R_4_3170001	chr2R_3170001	0.75	RAL-340_100b
418	chr2R	3190476	3190577	INE-1	89	145	7	101	'2-5	71.62	12.3	0.5	intron	CG42596 +	chr2R_7_3190001	chr2R_3190001	0.29	RAL-340_100b
419	chr2R	3479965	3480110	Gypsy6A_LTR	230	140	4	145	'2-2	70.91	16.4	0.2	intergenic	not near genes	chr2R_4_3475001	chr2R_3475001	0.50	RAL-340_100b
420	chr2R	3492350	3492500	INE-1	577	545	8	150	'5-3	65.41	51.2	0.2	intergenic	not near genes	chr2R_8_3490001	chr2R_3490001	0.62	RAL-340_100b
421	chr2R	3492362	3492611	Tabor	6856	397	39	249	'15-24	66.91	43.0	0.9	intergenic	not near genes	chr2R_39_3490001	chr2R_3490001	0.38	RAL-340_100b
422	chr2R	3492629	3492825	1360	3387	227	14	196	'5-9	70.94	52.1	0.3	intergenic	not near genes	chr2R_14_3490001	chr2R_3490001	0.36	RAL-340_100b
423	chr2R	3493872	3493940	1360	3181	3234	7	68	'2-5	66.46	38.9	0.2	intergenic	not near genes	chr2R_7_3490001	chr2R_3490001	0.29	RAL-340_100b
424	chr2R	3504507	3504625	pogo	2090	4	17	118	'5-12	66.69	19.0	0.8	intergenic	not near genes	chr2R_17_3500001	chr2R_3500001	0.29	RAL-340_100b
425	chr2R	3515292	3515488	Cr1a	48	156	4	196	'2-2	70.79	16.0	0.2	intergenic	not near genes	chr2R_4_3515001	chr2R_3515001	0.50	RAL-340_100b
426	chr2R	3521893	3521974	Cr1a	4076	4128	4	81	'1-3	62.09	18.7	0.2	intergenic	not near genes	chr2R_4_3520001	chr2R_3520001	0.25	RAL-340_100b
427	chr2R	3523843	3524100	Cr1a	3982	4005	9	257	'8-1	63.71	6.3	1.2	intergenic	not near genes	chr2R_9_3520001	chr2R_3520001	0.89	RAL-340_100b
428	chr2R	3526468	3526558	Cr1a	97	6	6	90	'3-3	65.90	16.3	0.3	intergenic	not near genes	chr2R_6_3525001	chr2R_3525001	0.50	RAL-340_100b
429	chr2R	3562884	3563015	17.6	168	81	7	131	'5-2	69.91	12.6	0.5	intergenic	not near genes	chr2R_7_3560001	chr2R_3560001	0.71	RAL-340_100b
430	chr2R	3579038	3579090	Cr1a	33	197	4	52	'1-3	69.82	14.7	0.3	intergenic	not near genes	chr2R_4_3575001	chr2R_3575001	0.25	RAL-340_100b
431	chr2R	3590741	3590903	FB	442	744	10	162	'2-8	70.80	17.3	0.5	intergenic	not near genes	chr2R_10_3590001	chr2R_3590001	0.20	RAL-340_100b
432	chr2R	3600206	3600279	G3	4481	4505	11	73	'4-7	71.27	15.2	0.7	intergenic	not near genes	chr2R_11_3600001	chr2R_3600001	0.36	RAL-340_100b
433	chr2R	3898527	3898693	1360	437	432	4	166	'2-2	70.14	14.1	0.3	intergenic	not near genes	chr2R_4_3895001	chr2R_3895001	0.50	RAL-340_100b
434	chr2R	3906018	3906234	flea	138	5009	39	216	'9-30	65.39	11.1	3.2	intron	uex -	chr2R_39_3905001	chr2R_3905001	0.23	RAL-340_100b
435	chr2R	3915315	3915498	G4	3664	3501	9	183	'5-4	63.44	13.8	0.6	intron	uex -	chr2R_9_3915001	chr2R_3915001	0.56	RAL-340_100b
436	chr2R	3931715	3931872	mariner2	50	125	12	157	'1-11	73.52	18.7	0.6	intron	uex -	chr2R_12_3930001	chr2R_3930001	0.08	RAL-340_100b
437	chr2R	3937290	3937396	rooA	7248	108	4	106	'1-3	74.32	11.2	0.3	intron	uex -	chr2R_4_3935001	chr2R_3935001	0.25	RAL-340_100b
438	chr2R	3939681	3939725	INE-1	301	553	5	44	'4-1	71.69	34.3	0.1	intron	uex -	chr2R_5_3935001	chr2R_3935001	0.80	RAL-340_100b
439	chr2R	3941937	3941992	1360	3280	3319	5	55	'4-1	68.49	22.8	0.2	intron	uex -	chr2R_5_3940001	chr2R_3940001	0.80	RAL-340_100b
440	chr2R	4012082	4012177	transib2	2409	2452	11	95	'8-3	70.05	21.2	0.5	intergenic	not near genes	chr2R_11_4010001	chr2R_4010001	0.73	RAL-340_100b
441	chr2R	4024197	4024227	Idefix	170	7334	6	30	'1-5	72.61	30.6	0.2	intron	Haspin +	chr2R_6_4020001	chr2R_4020001	0.17	RAL-340_100b
442	chr2R	4167288	4167455	1360	86	154	4	167	'2-2	76.73	22.4	0.2	intergenic	not near genes	chr2R_4_4165001	chr2R_4165001	0.50	RAL-340_100b
443	chr2R	4189775	4189956	1360	13	3333	8	181	'1-7	72.55	30.9	0.3	intergenic	not near genes	chr2R_8_4185001	chr2R_4185001	0.12	RAL-340_100b
444	chr2R	4193208	4193339	1360	121	326	8	131	'4-4	66.44	31.6	0.2	intergenic	not near genes	chr2R_8_4190001	chr2R_4190001	0.50	RAL-340_100b
445	chr2R	4194237	4194324	1360	39	3257	8	87	'6-2	67.45	43.1	0.2	intergenic	not near genes	chr2R_8_4190001	chr2R_4190001	0.75	RAL-340_100b
446	chr2R	4269706	4269935	1360	331	306	4	229	'3-1	66.73	12.8	0.3	intergenic	not near genes	chr2R_4_4265001	chr2R_4265001	0.75	RAL-340_100b
447	chr2R	4270251	4270407	Porto1	10	180	7	156	'3-4	69.47	14.5	0.5	intergenic	not near genes	chr2R_7_4270001	chr2R_4270001	0.43	RAL-340_100b
448	chr2R	4310048	4310233	INE-1	572	545	4	185	'3-1	70.76	27.6	0.1	intergenic	not near genes	chr2R_4_4310001	chr2R_4310001	0.75	RAL-340_100b
449	chr2R	4323115	4323197	1360	3371	3334	7	82	'2-5	73.39	18.5	0.4	intron	Gprk1 -	chr2R_7_4320001	chr2R_4320001	0.29	RAL-340_100b
450	chr2R	4369417	4369588	diver2	333	4766	20	171	'8-12	66.95	8.6	2.1	intron	Gprk1 -	chr2R_20_4365001	chr2R_4365001	0.40	RAL-340_100b
451	chr2R	4426674	4426828	1360	3353	3371	5	154	'3-2	70.37	18.9	0.3	intron	Gprk1 -	chr2R_5_4425001	chr2R_4425001	0.60	RAL-340_100b
452	chr2R	4427810	4428052	1360	245	20	7	242	'5-2	67.20	14.4	0.5	intron	Gprk1 -	chr2R_7_4425001	chr2R_4425001	0.71	RAL-340_100b
453	chr2R	4492372	4492429	Chouto	95	105	4	57	'2-2	65.27	37.8	0.1	intergenic	not near genes	chr2R_4_4490001	chr2R_4490001	0.50	RAL-340_100b
454	chr2R	4520643	4520903	1360	205	212	6	260	'5-1	69.22	33.2	0.2	intergenic	not near genes	chr2R_6_4520001	chr2R_4520001	0.83	RAL-340_100b
455	chr2R	4521547	4521776	1360	29	3297	8	229	'4-4	63.93	20.8	0.4	intergenic	not near genes	chr2R_8_4520001	chr2R_4520001	0.50	RAL-340_100b
456	chr2R	4525759	4525869	Cr1a	162	82	7	110	'5-2	66.35	21.8	0.3	intergenic	not near genes	chr2R_7_4525001	chr2R_4525001	0.71	RAL-340_100b
457	chr2R	4547607	4547805	transib4	2626	2460	21	198	'18-3	69.34	10.9	1.8	intron	Stlk +	chr2R_21_4545001	chr2R_4545001	0.86	RAL-340_100b
458	chr2R	4550785	4550941	roo	370	8995	6	156	'3-3	67.64	17.1	0.3	intron	Stlk +	chr2R_6_4550001	chr2R_4550001	0.50	RAL-340_100b
459	chr2R	4557412	4557522	Doc2-element	4742	4754	5	110	'2-3	72.35	15.6	0.3	intron	Stlk +	chr2R_5_4555001	chr2R_4555001	0.40	RAL-340_100b
460	chr2R	4562761	4563003	1360	3353	3379	5	242	'2-3	69.35	18.7	0.3	intron	Stlk +	chr2R_5_4560001	chr2R_4560001	0.40	RAL-340_100b
461	chr2R	4563071	4563110	Cr1a	4045	4001	4	39	'1-3	61.45	26.1	0.1	exon	Stlk +	chr2R_4_4560001	chr2R_4560001	0.25	RAL-340_100b
462	chr2R	4582174	4582336	Cr1a	4249	4217	9	162	'2-7	67.40	20.8	0.4	intergenic	not near genes	chr2R_9_4580001	chr2R_4580001	0.22	RAL-340_100b
463	chr2R	4582316	4582647	1360	181	8	12	331	'6-6	70.10	12.7	0.9	intergenic	not near genes	chr2R_12_4580001	chr2R_4580001	0.50	RAL-340_100b
464	chr2R	4584650	4584748	Max-element	1	295	29	98	'11-18	65.49	12.2	2.2	intergenic	not near genes	chr2R_29_4580001	chr2R_4580001	0.38	RAL-340_100b
465	chr2R	4596067	4596275	blood	7368	45	27	208	'1-26	68.11	6.3	3.7	intron	p120ctn +	chr2R_27_4595001	chr2R_4595001	0.04	RAL-340_100b
466	chr2R	4610082	4610303	1360	19	57	5	221	'1-4	74.51	17.1	0.3	intergenic	not near genes	chr2R_5_4610001	chr2R_4610001	0.20	RAL-340_100b
467	chr2R	4611345	4611485	1360	3267	4	7	140	'5-2	69.44	18.4	0.4	intergenic	not near genes	chr2R_7_4610001	chr2R_4610001	0.71	RAL-340_100b
468	chr2R	4614699	4614801	INE-1	344	191	4	102	'1-3	66.78	23.5	0.2	intergenic	not near genes	chr2R_4_4610001	chr2R_4610001	0.25	RAL-340_100b
469	chr2R	4618419	4618508	1360	3252	3362	13	89	'10-3	70.87	20.4	0.6	intergenic	not near genes	chr2R_13_4615001	chr2R_4615001	0.77	RAL-340_100b
470	chr2R	4618429	4618504	INE-1	150	150	6	75	'1-5	69.22	22.0	0.3	intergenic	not near genes	chr2R_6_4615001	chr2R_4615001	0.17	RAL-340_100b
471	chr2R	4639933	4639985	1360	3337	236	4	52	'2-2	70.50	26.9	0.1	intergenic	not near genes	chr2R_4_4635001	chr2R_4635001	0.50	RAL-340_100b
472	chr2R	4670405	4670481	S-element	1699	61	7	76	'4-3	64.05	16.6	0.4	intergenic	not near genes	chr2R_7_4670001	chr2R_4670001	0.57	RAL-340_100b
473	chr2R	4673432	4673661	Quasimodo	7340	89	14	229	'1-13	69.83	8.6	1.5	exon	CG17883 +	chr2R_14_4670001	chr2R_4670001	0.07	RAL-340_100b
474	chr2R	4676496	4676722	1360	178	440	4	226	'2-2	63.47	12.0	0.3	intergenic	not near genes	chr2R_4_4675001	chr2R_4675001	0.50	RAL-340_100b
475	chr2R	4688217	4688396	Cr1a	4104	4045	5	179	'2-3	70.22	12.9	0.4	intergenic	not near genes	chr2R_5_4685001	chr2R_4685001	0.40	RAL-340_100b
476	chr2R	4709799	4709948	Tc1-2	105	231	8	149	'4-4	70.23	11.3	0.7	intron	Nipped-B -	chr2R_8_4705001	chr2R_4705001	0.50	RAL-340_100b
477	chr2R	4719007	4719331	1360	3359	63	4	324	'3-1	66.22	15.7	0.2	intron	Nipped-B -	chr2R_4_4715001	chr2R_4715001	0.75	RAL-340_100b
478	chr2R	4723574	4723742	Tc3	1641	1666	9	168	'3-6	73.37	15.4	0.5	intron	Nipped-B -	chr2R_9_4720001	chr2R_4720001	0.33	RAL-340_100b
479	chr2R	4736305	4736403	rooA	7422	7587	4	98	'2-2	66.38	15.2	0.2	intergenic	not near genes	chr2R_4_4735001	chr2R_4735001	0.50	RAL-340_100b
480	chr2R	4743349	4743504	Cr1a	95	60	9	155	'6-3	69.97	11.2	0.7	intergenic	not near genes	chr2R_9_4740001	chr2R_4740001	0.67	RAL-340_100b
481	chr2R	4745209	4745283	1360	3166	208	18	74	'16-2	67.66	19.8	0.9	intron	conu +	chr2R_18_4745001	chr2R_4745001	0.89	RAL-340_100b
482	chr2R	4748438	4748721	INE-1	31	255	5	283	'2-3	67.35	14.4	0.3	intron	conu +	chr2R_5_4745001	chr2R_4745001	0.40	RAL-340_100b
483	chr2R	4751548	4751822	INE-1	548	221	4	274	'1-3	66.78	14.1	0.3	intron	conu +	chr2R_4_4750001	chr2R_4750001	0.25	RAL-340_100b
484	chr2R	4755948	4755979	INE-1	142	30	4	31	'1-3	69.69	27.8	0.1	intron	conu +	chr2R_4_4755001	chr2R_4755001	0.25	RAL-340_100b
485	chr2R	4786192	4786348	1360	3334	16	6	156	'4-2	69.60	19.7	0.3	3` UTR	CG12547 -	chr2R_6_4785001	chr2R_4785001	0.67	RAL-340_100b
486	chr2R	4802891	4803112	mariner2	189	373	6	221	'4-2	71.62	24.0	0.2	intergenic	not near genes	chr2R_6_4800001	chr2R_4800001	0.67	RAL-340_100b
487	chr2R	4803457	4803574	Bari2	1004	261	19	117	'8-11	65.18	29.0	0.6	intergenic	not near genes	chr2R_19_4800001	chr2R_4800001	0.42	RAL-340_100b
488	chr2R	4822108	4822269	Tom1	186	319	10	161	'8-2	59.99	15.7	0.6	intron	CG17528 -	chr2R_10_4820001	chr2R_4820001	0.80	RAL-340_100b
489	chr2R	4848632	4848794	17.6	476	476	10	162	'2-8	71.18	9.4	1.0	intergenic	not near genes	chr2R_10_4845001	chr2R_4845001	0.20	RAL-340_100b
490	chr2R	4888296	4888402	jockey2	3362	3374	7	106	'4-3	66.31	12.7	0.5	intergenic	not near genes	chr2R_7_4885001	chr2R_4885001	0.57	RAL-340_100b
491	chr2R	4899127	4899438	Juan	4054	4190	58	311	'24-34	64.63	13.7	3.9	intron	CG44102 -	chr2R_58_4895001	chr2R_4895001	0.41	RAL-340_100b
492	chr2R	4900879	4901172	INE-1	551	553	4	293	'2-2	66.48	11.3	0.3	intron	CG44102 -	chr2R_4_4900001	chr2R_4900001	0.50	RAL-340_100b
493	chr2R	4950432	4950513	Cr1a	4323	4395	4	81	'2-2	62.71	27.7	0.1	intron	Ir41a +	chr2R_4_4950001	chr2R_4950001	0.50	RAL-340_100b
494	chr2R	4973636	4973798	INE-1	542	546	6	162	'3-3	77.41	13.7	0.4	intron	Ir41a +	chr2R_6_4970001	chr2R_4970001	0.50	RAL-340_100b
495	chr2R	5018590	5018810	rooA	7285	58	9	220	'2-7	64.35	14.1	0.6	intron	Ir41a +	chr2R_9_5015001	chr2R_5015001	0.22	RAL-340_100b
496	chr2R	5019262	5019401	rooA	202	270	7	139	'4-3	61.34	8.4	0.7	intron	Ir41a +	chr2R_7_5015001	chr2R_5015001	0.57	RAL-340_100b
497	chr2R	5064605	5064840	Stalker3T	203	204	1336	235	'3-1333	64.22	16.3	77.2	intergenic	not near genes	chr2R_1336_5060001	chr2R_5060001	0.00	RAL-340_100b
498	chr2R	5067473	5067689	F-element	25	4505	26	216	'3-23	66.56	5.1	4.3	intron	TpnC41C -	chr2R_26_5065001	chr2R_5065001	0.12	RAL-340_100b
499	chr2R	5145573	5145620	BS3	1627	1622	5	47	'2-3	64.89	14.3	0.3	intron	Atf6 +	chr2R_5_5145001	chr2R_5145001	0.40	RAL-340_100b
500	chr2R	5179935	5180269	FB	93	99	10	334	'1-9	71.42	11.7	0.8	intron	Nipped-A -	chr2R_10_5175001	chr2R_5175001	0.10	RAL-340_100b
501	chr2R	5181804	5181866	mariner2	791	817	5	62	'2-3	71.09	17.2	0.3	intron	Nipped-A -	chr2R_5_5180001	chr2R_5180001	0.40	RAL-340_100b
502	chr2R	5184905	5185170	INE-1	574	548	5	265	'3-2	70.38	16.8	0.3	intron	Nipped-A -	chr2R_5_5180001	chr2R_5180001	0.60	RAL-340_100b
503	chr2R	5198156	5198605	INE-1	552	85	5	449	'2-3	60.79	15.8	0.3	intron	Nipped-A -	chr2R_5_5195001	chr2R_5195001	0.40	RAL-340_100b
504	chr2R	5212074	5212314	INE-1	166	262	14	240	'13-1	69.20	14.1	0.9	intron	Nipped-A -	chr2R_14_5210001	chr2R_5210001	0.93	RAL-340_100b
505	chr2R	5217679	5217726	INE-1	566	580	4	47	'3-1	62.21	19.4	0.2	intron	Nipped-A -	chr2R_4_5215001	chr2R_5215001	0.75	RAL-340_100b
506	chr2R	5237152	5237292	rooA	230	333	4	140	'3-1	73.32	12.1	0.3	intron	Nipped-A -	chr2R_4_5235001	chr2R_5235001	0.75	RAL-340_100b
507	chr2R	5237679	5238000	Doc	4661	62	34	321	'4-30	58.63	12.7	2.5	intron	Nipped-A -	chr2R_34_5235001	chr2R_5235001	0.12	RAL-340_100b
508	chr2R	5241876	5242357	INE-1	580	540	5	481	'2-3	64.06	8.9	0.5	intron	Nipped-A -	chr2R_5_5240001	chr2R_5240001	0.40	RAL-340_100b
509	chr2R	5249439	5249579	blood	22	7162	12	140	'11-1	63.44	12.8	0.9	intron	Nipped-A -	chr2R_12_5245001	chr2R_5245001	0.92	RAL-340_100b
510	chr2R	5258487	5258577	Ivk	7	5302	29	90	'20-9	59.92	11.9	2.2	intergenic	not near genes	chr2R_29_5255001	chr2R_5255001	0.69	RAL-340_100b
511	chr2R	5259892	5260087	1360	374	392	54	195	'2-52	74.02	12.2	4.1	5` UTR	d4 +	chr2R_54_5255001	chr2R_5255001	0.04	RAL-340_100b
512	chr2R	5262281	5262387	1360	24	14	4	106	'3-1	60.11	26.0	0.1	intron	d4 +	chr2R_4_5260001	chr2R_5260001	0.75	RAL-340_100b
513	chr2R	5265145	5265185	Q-element	431	560	7	40	'4-3	51.81	22.5	0.3	intron	d4 +	chr2R_7_5265001	chr2R_5265001	0.57	RAL-340_100b
514	chr2R	5269311	5269494	Cr1a	4383	4429	10	183	'2-8	68.81	47.9	0.2	intron	d4 +	chr2R_10_5265001	chr2R_5265001	0.20	RAL-340_100b
515	chr2R	5282613	5282787	G4	3465	3493	4	174	'2-2	69.13	12.5	0.3	intron	d4 +	chr2R_4_5280001	chr2R_5280001	0.50	RAL-340_100b
516	chr2R	5283500	5283641	Cr1a	4026	4189	5	141	'3-2	68.08	16.1	0.3	intron	d4 +	chr2R_5_5280001	chr2R_5280001	0.60	RAL-340_100b
517	chr2R	5284170	5284278	Cr1a	4221	4318	12	108	'8-4	71.15	21.8	0.5	intron	d4 +	chr2R_12_5280001	chr2R_5280001	0.67	RAL-340_100b
518	chr2R	5284490	5284601	accord	7334	7337	4	111	'1-3	71.41	16.1	0.2	intron	d4 +	chr2R_4_5280001	chr2R_5280001	0.25	RAL-340_100b
519	chr2R	5296192	5296381	INE-1	34	209	8	189	'2-6	68.14	20.4	0.4	intergenic	d4 +	chr2R_8_5295001	chr2R_5295001	0.25	RAL-340_100b
520	chr2R	5308969	5309080	hopper	1317	1284	7	111	'6-1	71.30	24.6	0.3	intron	sxc +	chr2R_7_5305001	chr2R_5305001	0.86	RAL-340_100b
521	chr2R	5311892	5312070	FB	760	961	4	178	'3-1	69.97	15.2	0.2	intron	sxc +	chr2R_4_5310001	chr2R_5310001	0.75	RAL-340_100b
522	chr2R	5324611	5324885	INE-1	139	135	6	274	'4-2	68.64	22.4	0.3	intron	sxc +	chr2R_6_5320001	chr2R_5320001	0.67	RAL-340_100b
523	chr2R	5353333	5353362	FB	256	258	9	29	'2-7	68.13	19.6	0.4	intergenic	not near genes	chr2R_9_5350001	chr2R_5350001	0.22	RAL-340_100b
524	chr2R	5401629	5401687	1360	133	27	6	58	'4-2	73.24	38.3	0.2	intergenic	not near genes	chr2R_6_5400001	chr2R_5400001	0.67	RAL-340_100b
525	chr2R	5410904	5410967	Tc1	1277	1403	6	63	'3-3	66.04	10.0	0.5	intergenic	not near genes	chr2R_6_5410001	chr2R_5410001	0.50	RAL-340_100b
526	chr2R	5420900	5421096	S-element	1685	106	5	196	'4-1	63.14	12.8	0.4	intron	laccase2 +	chr2R_5_5420001	chr2R_5420001	0.80	RAL-340_100b
527	chr2R	5425312	5425387	1360	3200	54	9	75	'2-7	73.55	50.2	0.2	intron	laccase2 +	chr2R_9_5425001	chr2R_5425001	0.22	RAL-340_100b
528	chr2R	5426519	5426887	1360	3380	213	11	368	'8-3	67.65	10.8	0.9	intron	laccase2 +	chr2R_11_5425001	chr2R_5425001	0.73	RAL-340_100b
529	chr2R	5431489	5431622	Cr1a	166	106	10	133	'6-4	67.90	14.2	0.7	intron	laccase2 +	chr2R_10_5430001	chr2R_5430001	0.60	RAL-340_100b
530	chr2R	5438536	5438611	INE-1	116	31	5	75	'4-1	71.36	19.2	0.2	intron	laccase2 +	chr2R_5_5435001	chr2R_5435001	0.80	RAL-340_100b
531	chr2R	5484952	5485202	1360	3383	3237	72	250	'35-37	64.85	10.5	6.3	intron	CG30440 -	chr2R_72_5480001	chr2R_5480001	0.49	RAL-340_100b
532	chr2R	5498461	5498619	INE-1	553	498	4	158	'3-1	72.82	16.5	0.2	intron	CG30438 +	chr2R_4_5495001	chr2R_5495001	0.75	RAL-340_100b
533	chr2R	5514847	5514922	HB	1528	1575	4	75	'2-2	65.59	24.7	0.2	intron	CG30438 +	chr2R_4_5510001	chr2R_5510001	0.50	RAL-340_100b
534	chr2R	5521751	5521789	HB	6	4	4	38	'1-3	71.70	36.7	0.1	intron	CG30438 +	chr2R_4_5520001	chr2R_5520001	0.25	RAL-340_100b
535	chr2R	5531165	5531203	1360	73	57	20	38	'10-10	62.30	11.1	1.7	intron	CG30438 +	chr2R_20_5530001	chr2R_5530001	0.50	RAL-340_100b
536	chr2R	5581992	5582177	Cr1a	13	92	12	185	'6-6	68.17	20.3	0.6	intergenic	not near genes	chr2R_12_5580001	chr2R_5580001	0.50	RAL-340_100b
537	chr2R	5604186	5604548	pogo	52	21	21	362	'14-7	67.48	11.8	1.6	intron	Fis1 -	chr2R_21_5600001	chr2R_5600001	0.67	RAL-340_100b
538	chr2R	5616509	5616610	BS3	1633	1669	4	101	'2-2	65.50	10.8	0.3	intergenic	not near genes	chr2R_4_5615001	chr2R_5615001	0.50	RAL-340_100b
539	chr2R	5616836	5617199	I-element	5033	100	4	363	'3-1	69.76	20.5	0.2	intergenic	not near genes	chr2R_4_5615001	chr2R_5615001	0.75	RAL-340_100b
540	chr2R	5617334	5617483	Gypsy6A_LTR	377	180	4	149	'1-3	75.74	8.4	0.4	intergenic	not near genes	chr2R_4_5615001	chr2R_5615001	0.25	RAL-340_100b
541	chr2R	5636489	5636519	1360	29	3340	4	30	'1-3	74.24	74.3	0.1	intergenic	not near genes	chr2R_4_5635001	chr2R_5635001	0.25	RAL-340_100b
542	chr2R	5666104	5666188	Max-element	8533	4	49	84	'26-23	65.35	14.8	3.1	intergenic	CR45472 +	chr2R_49_5665001	chr2R_5665001	0.53	RAL-340_100b
543	chr2R	5666181	5666479	1360	3177	10	4	298	'2-2	64.30	13.2	0.3	intergenic	CR45472 +	chr2R_4_5665001	chr2R_5665001	0.50	RAL-340_100b
544	chr2R	5666931	5667272	INE-1	549	257	12	341	'4-8	65.12	10.6	1.0	intergenic	not near genes	chr2R_12_5665001	chr2R_5665001	0.33	RAL-340_100b
545	chr2R	5674613	5674922	S-element	1624	8	42	309	'32-10	66.19	8.7	4.3	intergenic	not near genes	chr2R_42_5670001	chr2R_5670001	0.76	RAL-340_100b
546	chr2R	5678240	5678363	baggins	5427	5428	5	123	'1-4	72.55	18.8	0.3	intron	scaf -	chr2R_5_5675001	chr2R_5675001	0.20	RAL-340_100b
547	chr2R	5678518	5678686	INE-1	578	246	4	168	'1-3	68.18	18.3	0.2	intron	scaf -	chr2R_4_5675001	chr2R_5675001	0.25	RAL-340_100b
548	chr2R	5722119	5722604	INE-1	146	152	9	485	'6-3	71.18	15.7	0.5	intron	ap -	chr2R_9_5720001	chr2R_5720001	0.67	RAL-340_100b
549	chr2R	5724545	5724656	INE-1	546	95	6	111	'2-4	66.07	22.2	0.3	intron	ap -	chr2R_6_5720001	chr2R_5720001	0.33	RAL-340_100b
550	chr2R	5744054	5744194	INE-1	80	92	5	140	'1-4	70.70	20.7	0.2	intergenic	not near genes	chr2R_5_5740001	chr2R_5740001	0.20	RAL-340_100b
551	chr2R	5756776	5757232	Tc3	478	1354	4	456	'2-2	62.86	9.9	0.4	intergenic	l(2)09851 +	chr2R_4_5755001	chr2R_5755001	0.50	RAL-340_100b
552	chr2R	5762269	5762507	FB	664	741	7	238	'3-4	72.14	13.4	0.5	intron	Gp210 +	chr2R_7_5760001	chr2R_5760001	0.43	RAL-340_100b
553	chr2R	5779611	5780071	INE-1	571	575	8	460	'6-2	61.25	10.8	0.7	intron	ZnT41F -	chr2R_8_5775001	chr2R_5775001	0.75	RAL-340_100b
554	chr2R	5783406	5783573	INE-1	568	527	7	167	'6-1	72.55	6.1	1.0	intergenic	not near genes	chr2R_7_5780001	chr2R_5780001	0.86	RAL-340_100b
555	chr2R	5847785	5847992	412	484	13	36	207	'3-33	66.70	12.9	2.6	intron	dpr12 +	chr2R_36_5845001	chr2R_5845001	0.08	RAL-340_100b
556	chr2R	5865734	5865942	INE-1	151	158	7	208	'4-3	68.06	16.7	0.4	intergenic	not near genes	chr2R_7_5865001	chr2R_5865001	0.57	RAL-340_100b
557	chr2R	5985973	5986109	INE-1	146	139	4	136	'1-3	71.87	20.9	0.2	intron	Src42A +	chr2R_4_5985001	chr2R_5985001	0.25	RAL-340_100b
558	chr2R	5987137	5987248	INE-1	531	551	5	111	'1-4	63.87	15.5	0.3	intron	Src42A +	chr2R_5_5985001	chr2R_5985001	0.20	RAL-340_100b
559	chr2R	6023386	6023655	Quasimodo	7366	37	5	269	'3-2	69.01	14.7	0.3	intergenic	dream -	chr2R_5_6020001	chr2R_6020001	0.60	RAL-340_100b
560	chr2R	6024638	6024820	INE-1	555	577	4	182	'3-1	66.03	15.0	0.2	intergenic	not near genes	chr2R_4_6020001	chr2R_6020001	0.75	RAL-340_100b
561	chr2R	6112670	6112818	I-element	5022	5035	4	148	'2-2	63.34	23.5	0.2	intron	EcR -	chr2R_4_6110001	chr2R_6110001	0.50	RAL-340_100b
562	chr2R	6121086	6121172	R1A1-element	5193	4989	4	86	'2-2	68.59	23.1	0.2	intron	EcR -	chr2R_4_6120001	chr2R_6120001	0.50	RAL-340_100b
563	chr2R	6160408	6160565	INE-1	558	550	4	157	'3-1	79.97	17.6	0.2	intron	EcR -	chr2R_4_6160001	chr2R_6160001	0.75	RAL-340_100b
564	chr2R	6241488	6241631	INE-1	571	171	5	143	'2-3	71.53	21.3	0.2	intergenic	not near genes	chr2R_5_6240001	chr2R_6240001	0.40	RAL-340_100b
565	chr2R	6271505	6271600	rover	6821	250	39	95	'15-24	69.96	42.0	0.9	intergenic	not near genes	chr2R_39_6270001	chr2R_6270001	0.38	RAL-340_100b
566	chr2R	6438338	6438369	Stalker4	388	7314	16	31	'10-6	62.60	50.0	0.3	intergenic	not near genes	chr2R_16_6435001	chr2R_6435001	0.62	RAL-340_100b
567	chr2R	6462961	6463042	1360	8	58	6	81	'1-5	72.89	23.1	0.2	intergenic	not near genes	chr2R_6_6460001	chr2R_6460001	0.17	RAL-340_100b
568	chr2R	6486777	6486908	transib2	2683	2790	5	131	'3-2	72.28	19.1	0.2	intergenic	not near genes	chr2R_5_6485001	chr2R_6485001	0.60	RAL-340_100b
569	chr2R	6501709	6501929	P-element	2782	10	39	220	'6-33	49.76	13.5	2.7	intergenic	jing +	chr2R_39_6500001	chr2R_6500001	0.15	RAL-340_100b
570	chr2R	6564970	6565274	blood	7066	7352	43	304	'40-3	67.17	12.3	3.2	intron	jing +	chr2R_43_6560001	chr2R_6560001	0.93	RAL-340_100b
571	chr2R	6629971	6630031	Stalker3T	203	204	166	60	'165-1	63.05	19.0	8.3	intron	Vha16-1 -	chr2R_166_6625001	chr2R_6625001	0.99	RAL-340_100b
572	chr2R	6646710	6646739	INE-1	552	579	6	29	'3-3	69.00	10.0	0.5	intergenic	not near genes	chr2R_6_6645001	chr2R_6645001	0.50	RAL-340_100b
573	chr2R	6664098	6664197	S-element	64	1668	5	99	'2-3	71.67	14.1	0.3	intron,intron	Adf1 +,CR45128 -	chr2R_5_6660001	chr2R_6660001	0.40	RAL-340_100b
574	chr2R	6779626	6779864	17.6	478	8	24	238	'2-22	68.19	8.1	2.6	intron	Epac -	chr2R_24_6775001	chr2R_6775001	0.08	RAL-340_100b
575	chr2R	6806829	6807338	INE-1	550	549	4	509	'2-2	68.17	16.7	0.2	intergenic	not near genes	chr2R_4_6805001	chr2R_6805001	0.50	RAL-340_100b
576	chr2R	6853556	6853661	accord	7003	6982	4	105	'2-2	66.47	28.4	0.1	intergenic	not near genes	chr2R_4_6850001	chr2R_6850001	0.50	RAL-340_100b
577	chr2R	6945647	6945775	roo	410	19	5	128	'3-2	71.22	17.1	0.3	intron,intron	mim -,CheB42c -	chr2R_5_6945001	chr2R_6945001	0.60	RAL-340_100b
578	chr2R	6949018	6949315	mdg1	7079	37	5	297	'1-4	71.88	9.8	0.5	intron,intron	mim -,CheB42c -	chr2R_5_6945001	chr2R_6945001	0.20	RAL-340_100b
579	chr2R	6988852	6989092	HB	8	108	6	240	'2-4	65.47	16.7	0.3	3` UTR	CG17002 +	chr2R_6_6985001	chr2R_6985001	0.33	RAL-340_100b
580	chr2R	6990831	6990955	HB	1559	1613	5	124	'2-3	71.26	18.0	0.3	intergenic	not near genes	chr2R_5_6990001	chr2R_6990001	0.40	RAL-340_100b
581	chr2R	7015697	7015976	P-element	2881	2883	78	279	'76-2	43.15	13.4	5.4	intron	Tsp42Ee +	chr2R_78_7015001	chr2R_7015001	0.97	RAL-340_100b
582	chr2R	7048502	7048931	297	6972	6635	41	429	'23-18	67.71	10.9	3.4	3` UTR	Tsp42El +	chr2R_41_7045001	chr2R_7045001	0.56	RAL-340_100b
583	chr2R	7142872	7143063	X-element	6	4583	40	191	'34-6	65.96	7.7	4.6	intergenic	not near genes	chr2R_40_7140001	chr2R_7140001	0.85	RAL-340_100b
584	chr2R	7188517	7188767	I-element	5344	8	52	250	'1-51	61.73	13.3	3.6	intron	pk +	chr2R_52_7185001	chr2R_7185001	0.02	RAL-340_100b
585	chr2R	7248684	7248830	1360	60	14	4	146	'3-1	68.16	13.7	0.3	intergenic	Gadd45 +	chr2R_4_7245001	chr2R_7245001	0.75	RAL-340_100b
586	chr2R	7254275	7254474	flea	4949	4767	28	199	'11-17	65.96	9.7	2.6	intergenic	CR45280 +	chr2R_28_7250001	chr2R_7250001	0.39	RAL-340_100b
587	chr2R	7394040	7394122	mariner2	169	841	5	82	'3-2	71.84	16.0	0.3	intron	CG1707 -	chr2R_5_7390001	chr2R_7390001	0.60	RAL-340_100b
588	chr2R	7514034	7514188	Tc3	241	308	4	154	'3-1	63.95	8.2	0.4	3` UTR	CG1603 -	chr2R_4_7510001	chr2R_7510001	0.75	RAL-340_100b
589	chr2R	7589714	7589938	S-element	93	144	4	224	'1-3	72.06	19.8	0.2	intron	CG1360 -	chr2R_4_7585001	chr2R_7585001	0.25	RAL-340_100b
590	chr2R	7725329	7725671	roo	8686	319	67	342	'26-41	66.57	7.6	7.8	intron	CG18812 -	chr2R_67_7725001	chr2R_7725001	0.39	RAL-340_100b
591	chr2R	7761708	7761975	Doc	4623	6	20	267	'2-18	65.11	13.7	1.4	intron,intron	CG30497 -,CG45093 -	chr2R_20_7760001	chr2R_7760001	0.10	RAL-340_100b
592	chr2R	7806329	7806429	1360	3173	3166	8	100	'1-7	66.76	27.6	0.3	5` UTR	Nop17l -	chr2R_8_7805001	chr2R_7805001	0.12	RAL-340_100b
593	chr2R	8086662	8087087	1360	3	3386	75	425	'21-54	66.86	13.1	5.3	3` UTR	sut1 +	chr2R_75_8085001	chr2R_8085001	0.28	RAL-340_100b
594	chr2R	8086783	8087048	Tc3	316	240	8	265	'2-6	78.40	14.0	0.5	3` UTR	sut1 +	chr2R_8_8085001	chr2R_8085001	0.25	RAL-340_100b
595	chr2R	8119703	8120042	R1A1-element	4904	5025	4	339	'1-3	65.83	13.6	0.3	intron	Asap -	chr2R_4_8115001	chr2R_8115001	0.25	RAL-340_100b
596	chr2R	8232252	8232651	P-element	88	2868	11	399	'1-10	41.18	8.9	1.1	5` UTR	dpn -	chr2R_11_8230001	chr2R_8230001	0.09	RAL-340_100b
597	chr2R	8255855	8255980	Stalker	53	360	15	125	'6-9	66.15	7.7	1.7	intron	CG14760 +	chr2R_15_8255001	chr2R_8255001	0.40	RAL-340_100b
598	chr2R	8255895	8256107	Stalker4	6965	403	35	212	'26-9	59.68	8.9	3.5	intron	CG14760 +	chr2R_35_8255001	chr2R_8255001	0.74	RAL-340_100b
599	chr2R	8310859	8310940	pogo	2085	2	58	81	'33-25	69.03	19.0	2.9	3` UTR	CR44449 -	chr2R_58_8310001	chr2R_8310001	0.57	RAL-340_100b
600	chr2R	8384182	8384413	hobo	2936	44	25	231	'22-3	65.32	12.8	1.8	intron	pdm3 +	chr2R_25_8380001	chr2R_8380001	0.88	RAL-340_100b
601	chr2R	8436787	8436842	jockey2	3287	3390	8	55	'2-6	72.33	21.8	0.4	intergenic	not near genes	chr2R_8_8435001	chr2R_8435001	0.25	RAL-340_100b
602	chr2R	8437166	8437288	jockey2	3290	3218	5	122	'1-4	69.77	16.8	0.3	intergenic	Lcp4 +	chr2R_5_8435001	chr2R_8435001	0.20	RAL-340_100b
603	chr2R	8565695	8565748	1360	62	70	16	53	'1-15	59.53	9.2	1.6	exon	Cyp6a14 -	chr2R_16_8565001	chr2R_8565001	0.06	RAL-340_100b
604	chr2R	8566988	8567077	1360	50	3372	4	89	'2-2	73.96	21.8	0.2	5` UTR	Cyp6a14 -	chr2R_4_8565001	chr2R_8565001	0.50	RAL-340_100b
605	chr2R	8641436	8641478	mdg1	7057	7057	8	42	'5-3	76.44	30.2	0.3	intergenic	not near genes	chr2R_8_8640001	chr2R_8640001	0.62	RAL-340_100b
606	chr2R	8668746	8668834	P-element	2881	23	4	88	'1-3	57.34	30.3	0.1	intron	Acsl +	chr2R_4_8665001	chr2R_8665001	0.25	RAL-340_100b
607	chr2R	8693543	8693756	hobo	98	2831	18	213	'14-4	66.94	9.8	1.7	3` UTR	CG8586 -	chr2R_18_8690001	chr2R_8690001	0.78	RAL-340_100b
608	chr2R	8786269	8786568	opus	7500	95	37	299	'35-2	67.00	17.6	2.0	intergenic	not near genes	chr2R_37_8785001	chr2R_8785001	0.95	RAL-340_100b
609	chr2R	8817298	8817340	Gypsy6A_LTR	390	348	18	42	'7-11	64.10	24.6	0.7	intron	sns +	chr2R_18_8815001	chr2R_8815001	0.39	RAL-340_100b
610	chr2R	8817369	8817407	gypsy6	4	7429	14	38	'5-9	66.35	16.4	0.8	intron	sns +	chr2R_14_8815001	chr2R_8815001	0.36	RAL-340_100b
611	chr2R	9324741	9325030	hopper	1382	87	51	289	'29-22	68.61	9.2	5.0	intron,intron	CG13739 -,CG13954 -	chr2R_51_9320001	chr2R_9320001	0.57	RAL-340_100b
612	chr2R	9867824	9867874	roo	8996	9011	6	50	'1-5	65.16	9.9	0.6	intron	cbx -	chr2R_6_9865001	chr2R_9865001	0.17	RAL-340_100b
613	chr2R	9868969	9869141	roo	345	349	13	172	'8-5	77.07	12.6	1.0	intron,intron	cbx -,CR45138 +	chr2R_13_9865001	chr2R_9865001	0.62	RAL-340_100b
614	chr2R	9869855	9870000	S-element	1701	95	4	145	'1-3	71.89	14.5	0.3	intron	cbx -	chr2R_4_9865001	chr2R_9865001	0.25	RAL-340_100b
615	chr2R	9870679	9870717	rooA	7500	7325	4	38	'1-3	67.17	22.6	0.2	intron	cbx -	chr2R_4_9870001	chr2R_9870001	0.25	RAL-340_100b
616	chr2R	9870682	9870965	S-element	1715	75	44	283	'32-12	68.84	11.5	3.5	intron	cbx -	chr2R_44_9870001	chr2R_9870001	0.73	RAL-340_100b
617	chr2R	9898603	9899018	INE-1	551	548	4	415	'2-2	66.50	11.2	0.3	intergenic	CG30007 +,CG1441 -	chr2R_4_9895001	chr2R_9895001	0.50	RAL-340_100b
618	chr2R	9952117	9952333	F-element	4591	484	30	216	'1-29	64.70	9.5	2.9	intron	Mef2 -	chr2R_30_9950001	chr2R_9950001	0.03	RAL-340_100b
619	chr2R	9970801	9970894	G3	4506	4506	7	93	'1-6	70.54	35.3	0.2	3` UTR	Adam +	chr2R_7_9970001	chr2R_9970001	0.14	RAL-340_100b
620	chr2R	10151763	10151824	R1A1-element	4991	5049	4	61	'1-3	64.15	37.9	0.1	intron	KCNQ -	chr2R_4_10150001	chr2R_10150001	0.25	RAL-340_100b
621	chr2R	10306463	10306552	1731	79	4391	5	89	'3-2	59.19	26.2	0.2	3` UTR	CAP +	chr2R_5_10305001	chr2R_10305001	0.60	RAL-340_100b
622	chr2R	10324484	10324751	I-element	4888	78	4	267	'2-2	66.12	31.9	0.1	intron	CG42732 -	chr2R_4_10320001	chr2R_10320001	0.50	RAL-340_100b
623	chr2R	10351335	10351738	roo	9028	45	89	403	'36-53	67.85	13.3	6.2	intron	CG42732 -	chr2R_89_10350001	chr2R_10350001	0.40	RAL-340_100b
624	chr2R	10477876	10478095	P-element	3	2813	54	219	'47-7	48.58	13.6	3.7	intron	whd -	chr2R_54_10475001	chr2R_10475001	0.87	RAL-340_100b
625	chr2R	10572707	10572738	F-element	4384	4319	11	31	'10-1	58.73	36.3	0.3	intron	psq +	chr2R_11_10570001	chr2R_10570001	0.91	RAL-340_100b
626	chr2R	10735429	10735482	gypsy6	3	7450	18	53	'8-10	67.72	16.3	1.0	intron	CG7220 +	chr2R_18_10735001	chr2R_10735001	0.44	RAL-340_100b
627	chr2R	10735499	10735533	Gypsy6A_LTR	393	381	9	34	'7-2	68.78	16.5	0.5	intron	CG7220 +	chr2R_9_10735001	chr2R_10735001	0.78	RAL-340_100b
628	chr2R	10855381	10855558	297	6585	391	24	177	'7-17	65.00	8.8	2.4	intron	CG30015 -	chr2R_24_10855001	chr2R_10855001	0.29	RAL-340_100b
629	chr2R	10936545	10936785	blood	9	7255	45	240	'13-32	64.15	9.4	4.3	intergenic	not near genes	chr2R_45_10935001	chr2R_10935001	0.29	RAL-340_100b
630	chr2R	10978127	10978207	mdg1	7071	37	5	80	'3-2	71.28	26.0	0.2	intergenic	not near genes	chr2R_5_10975001	chr2R_10975001	0.60	RAL-340_100b
631	chr2R	10995359	10995461	jockey	4976	9	27	102	'16-11	63.92	6.7	3.5	intron	luna -	chr2R_27_10995001	chr2R_10995001	0.59	RAL-340_100b
632	chr2R	11050020	11050308	jockey	4934	4987	40	288	'39-1	66.27	16.8	2.2	intron	luna -	chr2R_40_11050001	chr2R_11050001	0.97	RAL-340_100b
633	chr2R	11219788	11219852	F-element	4508	4422	4	64	'1-3	63.03	29.2	0.1	intron	Syx6 +	chr2R_4_11215001	chr2R_11215001	0.25	RAL-340_100b
634	chr2R	11293504	11293807	roo	9033	49	61	303	'31-30	69.21	8.5	6.4	3` UTR	CG30033 +	chr2R_61_11290001	chr2R_11290001	0.51	RAL-340_100b
635	chr2R	11383501	11383756	jockey	108	4940	46	255	'16-30	66.28	13.2	3.2	intron	Sod3 -	chr2R_46_11380001	chr2R_11380001	0.35	RAL-340_100b
636	chr2R	11552074	11552203	gypsy6	7539	7469	11	129	'2-9	63.38	11.8	0.9	intergenic	not near genes	chr2R_11_11550001	chr2R_11550001	0.18	RAL-340_100b
637	chr2R	11552242	11552386	Gypsy6A_LTR	365	315	12	144	'11-1	61.84	14.3	0.8	intergenic	not near genes	chr2R_12_11550001	chr2R_11550001	0.92	RAL-340_100b
638	chr2R	11657575	11657798	S-element	1711	1664	36	223	'29-7	65.07	6.0	5.1	intron	Roc2 -	chr2R_36_11655001	chr2R_11655001	0.81	RAL-340_100b
639	chr2R	11663769	11663990	Doc	4697	4697	6	221	'5-1	77.76	21.0	0.3	intron	Roc2 -	chr2R_6_11660001	chr2R_11660001	0.83	RAL-340_100b
640	chr2R	11804582	11804749	opus	361	7115	24	167	'14-10	68.31	10.1	2.2	intron	ths +	chr2R_24_11800001	chr2R_11800001	0.58	RAL-340_100b
641	chr2R	12100559	12100692	accord	7054	163	4	133	'3-1	64.08	49.2	0.1	intron	jeb -	chr2R_4_12100001	chr2R_12100001	0.75	RAL-340_100b
642	chr2R	12185231	12185496	accord	360	72	49	265	'27-22	64.30	18.4	2.5	3` UTR,exon	CG13175 +,CG33964 +	chr2R_49_12185001	chr2R_12185001	0.55	RAL-340_100b
643	chr2R	12317714	12317866	Tc1-2	81	176	9	152	'3-6	57.38	5.4	1.4	intergenic	CG30046 +	chr2R_9_12315001	chr2R_12315001	0.33	RAL-340_100b
644	chr2R	12319483	12319528	Tc1-2	1216	1412	5	45	'2-3	64.27	24.1	0.2	intergenic	not near genes	chr2R_5_12315001	chr2R_12315001	0.40	RAL-340_100b
645	chr2R	12319822	12320084	invader4	6	279	24	262	'22-2	62.88	6.2	3.3	intergenic	not near genes	chr2R_24_12315001	chr2R_12315001	0.92	RAL-340_100b
646	chr2R	12336369	12336678	pogo	2095	3	31	309	'1-30	64.80	11.4	2.5	intergenic	CG8490 +	chr2R_31_12335001	chr2R_12335001	0.03	RAL-340_100b
647	chr2R	12388612	12388875	I-element	5018	319	4	263	'3-1	66.62	50.3	0.1	intron	Cpr49Ac +	chr2R_4_12385001	chr2R_12385001	0.75	RAL-340_100b
648	chr2R	12419501	12419596	jockey	4938	4952	22	95	'17-5	66.14	10.5	1.9	intergenic	CG42782 -,CG8834 -	chr2R_22_12415001	chr2R_12415001	0.77	RAL-340_100b
649	chr2R	12521436	12521469	INE-1	137	126	4	33	'1-3	50.75	27.1	0.1	3` UTR	CG8569 +	chr2R_4_12520001	chr2R_12520001	0.25	RAL-340_100b
650	chr2R	12576571	12577023	mdg1	7068	7056	4	452	'3-1	71.44	12.1	0.3	3` UTR	Sin3A -	chr2R_4_12575001	chr2R_12575001	0.75	RAL-340_100b
651	chr2R	12838139	12838245	R1A1-element	4965	5018	6	106	'3-3	70.77	21.7	0.3	intergenic	not near genes	chr2R_6_12835001	chr2R_12835001	0.50	RAL-340_100b
652	chr2R	12979966	12980018	transib1	1905	1901	6	52	'4-2	66.35	44.5	0.1	intron	Psc -	chr2R_6_12975001	chr2R_12975001	0.67	RAL-340_100b
653	chr2R	13047620	13047983	mdg1	7044	7339	23	363	'6-17	67.24	6.5	3.1	intergenic	CG13323 -	chr2R_23_13045001	chr2R_13045001	0.26	RAL-340_100b
654	chr2R	13048912	13049188	pogo	70	1944	40	276	'5-35	65.70	10.0	3.6	intergenic	CG13324 -	chr2R_40_13045001	chr2R_13045001	0.12	RAL-340_100b
655	chr2R	13077181	13077383	jockey	64	4948	14	202	'13-1	63.60	11.8	1.1	intron	Drl-2 -	chr2R_14_13075001	chr2R_13075001	0.93	RAL-340_100b
656	chr2R	13210106	13210457	mdg3	5361	5491	50	351	'33-17	65.45	11.9	3.9	3` UTR,3` UTR,3` UTR,exon	FLASH +,CG30058 -,CG34235 -,CG34312 -	chr2R_50_13210001	chr2R_13210001	0.66	RAL-340_100b
657	chr2R	13318813	13318986	I-element	101	5170	72	173	'27-45	63.57	20.7	3.3	intergenic	not near genes	chr2R_72_13315001	chr2R_13315001	0.38	RAL-340_100b
658	chr2R	13318954	13318989	mdg1	7079	32	8	35	'2-6	74.53	31.4	0.2	intergenic	not near genes	chr2R_8_13315001	chr2R_13315001	0.25	RAL-340_100b
659	chr2R	13393801	13394312	412	7524	29	47	511	'11-36	65.85	8.0	5.2	exon	AttC +	chr2R_47_13390001	chr2R_13390001	0.23	RAL-340_100b
660	chr2R	13403886	13404017	jockey	15	4883	15	131	'14-1	59.82	7.7	1.7	intergenic	not near genes	chr2R_15_13400001	chr2R_13400001	0.93	RAL-340_100b
661	chr2R	13438254	13438637	1360	42	251	5	383	'3-2	69.88	12.4	0.4	intron	CG42321 -	chr2R_5_13435001	chr2R_13435001	0.60	RAL-340_100b
662	chr2R	13560802	13560919	1360	3275	3208	5	117	'3-2	67.80	18.9	0.3	intergenic	CG13334 +	chr2R_5_13560001	chr2R_13560001	0.60	RAL-340_100b
663	chr2R	13615263	13615486	hopper	1335	1413	41	223	'6-35	65.89	9.8	3.8	intergenic	not near genes	chr2R_41_13615001	chr2R_13615001	0.15	RAL-340_100b
664	chr2R	13691497	13691738	Rt1a	5071	5031	18	241	'5-13	70.04	20.8	0.8	intron	fas +	chr2R_18_13690001	chr2R_13690001	0.28	RAL-340_100b
665	chr2R	13691658	13691730	Rt1b	5110	5108	5	72	'2-3	63.80	27.8	0.2	intron	fas +	chr2R_5_13690001	chr2R_13690001	0.40	RAL-340_100b
666	chr2R	13782252	13782349	R1A1-element	5235	4966	4	97	'3-1	59.89	23.8	0.2	intron	Cpr50Ca +	chr2R_4_13780001	chr2R_13780001	0.75	RAL-340_100b
667	chr2R	13934283	13934615	FB	1	28	75	332	'59-16	62.77	11.4	6.0	intron	shot -	chr2R_75_13930001	chr2R_13930001	0.79	RAL-340_100b
668	chr2R	14026176	14026409	roo	393	352	8	233	'1-7	66.25	27.6	0.3	intron	mam +	chr2R_8_14025001	chr2R_14025001	0.12	RAL-340_100b
669	chr2R	14078122	14078286	Doc	4692	4691	5	164	'4-1	58.34	12.0	0.4	intron	Prosap -	chr2R_5_14075001	chr2R_14075001	0.80	RAL-340_100b
670	chr2R	14333315	14333439	jockey	4863	4962	9	124	'5-4	65.70	12.4	0.7	intron	Shroom +	chr2R_9_14330001	chr2R_14330001	0.56	RAL-340_100b
671	chr2R	14342761	14342796	mdg1	32	7068	4	35	'3-1	74.34	23.1	0.2	intron	Shroom +	chr2R_4_14340001	chr2R_14340001	0.75	RAL-340_100b
672	chr2R	14385470	14385671	jockey	4908	34	19	201	'15-4	60.75	10.1	1.7	intergenic	Dh44-R1 +	chr2R_19_14385001	chr2R_14385001	0.79	RAL-340_100b
673	chr2R	14565436	14565890	roo	357	8687	67	454	'52-15	68.16	14.3	4.4	intron	ttv +	chr2R_67_14565001	chr2R_14565001	0.78	RAL-340_100b
674	chr2R	14684937	14685049	R1A1-element	127	83	4	112	'3-1	70.14	28.1	0.1	intron	mspo -	chr2R_4_14680001	chr2R_14680001	0.75	RAL-340_100b
675	chr2R	14813530	14813860	297	6614	6940	38	330	'21-17	67.66	9.4	3.7	intergenic	not near genes	chr2R_38_14810001	chr2R_14810001	0.55	RAL-340_100b
676	chr2R	14921241	14921711	pogo	31	2083	42	470	'3-39	65.43	8.9	4.2	intron	CG10249 -	chr2R_42_14920001	chr2R_14920001	0.07	RAL-340_100b
677	chr2R	14957083	14957463	FB	87	30	86	380	'42-44	67.29	11.7	6.8	intron	aPKC -	chr2R_86_14955001	chr2R_14955001	0.49	RAL-340_100b
678	chr2R	14981172	14981501	P-element	38	2829	77	329	'39-38	42.87	12.5	5.7	intergenic	pcs +,ckn +	chr2R_77_14980001	chr2R_14980001	0.51	RAL-340_100b
679	chr2R	14995781	14995887	Quasimodo	182	187	4	106	'3-1	78.81	29.1	0.1	intergenic	not near genes	chr2R_4_14995001	chr2R_14995001	0.75	RAL-340_100b
680	chr2R	15084739	15085007	412	15	7084	11	268	'1-10	49.95	11.1	0.9	intergenic	not near genes	chr2R_11_15080001	chr2R_15080001	0.09	RAL-340_100b
681	chr2R	15092042	15092110	412	469	466	18	68	'7-11	72.13	8.8	1.8	5` UTR	CR44457 +	chr2R_18_15090001	chr2R_15090001	0.39	RAL-340_100b
682	chr2R	15237930	15237994	hopper	141	141	4	64	'1-3	70.72	19.3	0.2	intron	Fs -	chr2R_4_15235001	chr2R_15235001	0.25	RAL-340_100b
683	chr2R	15253935	15254069	G7	1152	1150	4	134	'1-3	71.81	5.4	0.6	intron	scb +	chr2R_4_15250001	chr2R_15250001	0.25	RAL-340_100b
684	chr2R	15291043	15291213	springer	90	364	20	170	'4-16	65.02	6.5	2.7	intron	Trpm -	chr2R_20_15290001	chr2R_15290001	0.20	RAL-340_100b
685	chr2R	15291175	15291207	gypsy6	7766	7778	4	32	'1-3	60.00	4.7	0.7	intron	Trpm -	chr2R_4_15290001	chr2R_15290001	0.25	RAL-340_100b
686	chr2R	15360994	15361126	I-element	232	5013	4	132	'2-2	75.09	30.2	0.1	intron	unc-5 +	chr2R_4_15360001	chr2R_15360001	0.50	RAL-340_100b
687	chr2R	15373748	15374008	opus	442	8	28	260	'3-25	69.38	7.8	3.2	intergenic	not near genes	chr2R_28_15370001	chr2R_15370001	0.11	RAL-340_100b
688	chr2R	15374567	15375062	1360	4	219	24	495	'23-1	57.64	5.4	3.8	intergenic	not near genes	chr2R_24_15370001	chr2R_15370001	0.96	RAL-340_100b
689	chr2R	15613694	15613783	P-element	17	2875	37	89	'18-19	44.59	16.6	2.1	intergenic	CG42524 +	chr2R_37_15610001	chr2R_15610001	0.49	RAL-340_100b
690	chr2R	15928627	15928939	Tirant	8110	375	52	312	'44-8	65.69	13.7	3.5	intron	bdg -	chr2R_52_15925001	chr2R_15925001	0.85	RAL-340_100b
691	chr2R	16035801	16036013	accord	7004	7026	4	212	'3-1	69.22	38.4	0.1	intron	SP2353 +	chr2R_4_16035001	chr2R_16035001	0.75	RAL-340_100b
692	chr2R	16060351	16060719	Burdock	6378	6192	63	368	'15-48	65.93	12.0	4.8	3` UTR	CG8405 +	chr2R_63_16060001	chr2R_16060001	0.24	RAL-340_100b
693	chr2R	16064496	16064617	mdg1	421	10	22	121	'17-5	65.66	7.6	2.6	intergenic	not near genes	chr2R_22_16060001	chr2R_16060001	0.77	RAL-340_100b
694	chr2R	16218162	16218474	FB	82	22	79	312	'56-23	65.72	11.2	6.5	intron	mrj -	chr2R_79_16215001	chr2R_16215001	0.71	RAL-340_100b
695	chr2R	16282944	16283279	INE-1	559	551	7	335	'3-4	64.83	13.2	0.5	5` UTR	CG7755 -	chr2R_7_16280001	chr2R_16280001	0.43	RAL-340_100b
696	chr2R	16405377	16405802	jockey	4731	4983	25	425	'24-1	65.16	10.9	2.1	intron	Sema-2b +	chr2R_25_16405001	chr2R_16405001	0.96	RAL-340_100b
697	chr2R	16456186	16456583	INE-1	30	553	6	397	'3-3	68.28	17.4	0.3	intergenic	not near genes	chr2R_6_16455001	chr2R_16455001	0.50	RAL-340_100b
698	chr2R	16464306	16464736	I-element	5169	5324	30	430	'17-13	68.39	8.7	3.1	intergenic	not near genes	chr2R_30_16460001	chr2R_16460001	0.57	RAL-340_100b
699	chr2R	16472665	16472826	Quasimodo	4	35	4	161	'1-3	57.46	15.8	0.2	intergenic	not near genes	chr2R_4_16470001	chr2R_16470001	0.25	RAL-340_100b
700	chr2R	16472818	16472878	accord	189	183	4	60	'2-2	59.39	24.1	0.2	intergenic	not near genes	chr2R_4_16470001	chr2R_16470001	0.50	RAL-340_100b
701	chr2R	16479794	16480010	pogo	24	2038	40	216	'30-10	70.24	18.1	2.1	intergenic	not near genes	chr2R_40_16475001	chr2R_16475001	0.75	RAL-340_100b
702	chr2R	17165692	17166087	F-element	413	358	4	395	'3-1	62.63	40.4	0.1	exon	CG10953 -	chr2R_4_17165001	chr2R_17165001	0.75	RAL-340_100b
703	chr2R	17197846	17198141	accord	181	7026	5	295	'2-3	63.76	37.9	0.1	intergenic	not near genes	chr2R_5_17195001	chr2R_17195001	0.40	RAL-340_100b
704	chr2R	17231879	17232097	roo	408	88	31	218	'20-11	68.58	11.7	2.4	intron	mbl +	chr2R_31_17230001	chr2R_17230001	0.65	RAL-340_100b
705	chr2R	17254534	17254743	Idefix	7372	24	10	209	'1-9	69.91	11.3	0.8	intron,3` UTR	mbl +,CR43660 -	chr2R_10_17250001	chr2R_17250001	0.10	RAL-340_100b
706	chr2R	17278951	17279134	17.6	488	148	30	183	'14-16	66.05	12.5	2.2	intron	mbl +	chr2R_30_17275001	chr2R_17275001	0.47	RAL-340_100b
707	chr2R	17302743	17302953	jockey	4978	4727	8	210	'1-7	69.84	17.7	0.4	intron	mbl +	chr2R_8_17300001	chr2R_17300001	0.12	RAL-340_100b
708	chr2R	17561838	17561878	invader3	5084	5084	4	40	'2-2	65.32	30.2	0.1	exon	Klp54D +	chr2R_4_17560001	chr2R_17560001	0.50	RAL-340_100b
709	chr2R	17621767	17622081	roo	9034	8669	47	314	'25-22	67.15	7.7	5.4	intron	CG10936 -	chr2R_47_17620001	chr2R_17620001	0.53	RAL-340_100b
710	chr2R	17643269	17643404	roo	395	191	55	135	'34-21	67.77	10.6	4.7	intergenic	not near genes	chr2R_55_17640001	chr2R_17640001	0.62	RAL-340_100b
711	chr2R	17872280	17872425	gypsy5	312	6939	67	145	'20-47	67.21	9.5	6.4	intergenic	Mapmodulin -	chr2R_67_17870001	chr2R_17870001	0.30	RAL-340_100b
712	chr2R	17948299	17948536	I-element	5340	5314	17	237	'3-14	61.46	15.3	1.0	intergenic	not near genes	chr2R_17_17945001	chr2R_17945001	0.18	RAL-340_100b
713	chr2R	18143816	18143844	Stalker2	119	7331	4	28	'3-1	60.47	53.7	0.1	exon	pAbp +	chr2R_4_18140001	chr2R_18140001	0.75	RAL-340_100b
714	chr2R	18354737	18354985	Tirant	4	8505	37	248	'36-1	63.32	17.8	2.0	intron	sbb -	chr2R_37_18350001	chr2R_18350001	0.97	RAL-340_100b
715	chr2R	18511663	18511824	412	7273	196	4	161	'3-1	73.96	8.3	0.4	intergenic	not near genes	chr2R_4_18510001	chr2R_18510001	0.75	RAL-340_100b
716	chr2R	18807872	18807972	BS	5039	5038	16	100	'13-3	68.51	4.6	2.9	intergenic	CG15096 -	chr2R_16_18805001	chr2R_18805001	0.81	RAL-340_100b
717	chr2R	18858095	18858264	Bari1	1648	1551	6	169	'5-1	71.33	12.9	0.4	5` UTR	Jheh2 -	chr2R_6_18855001	chr2R_18855001	0.83	RAL-340_100b
718	chr2R	18860094	18860170	Bari1	58	83	4	76	'2-2	74.43	9.3	0.4	intergenic	Jheh3 -	chr2R_4_18860001	chr2R_18860001	0.50	RAL-340_100b
719	chr2R	18924233	18924365	roo	409	8664	65	132	'34-31	68.03	23.1	2.7	intron	sano +	chr2R_65_18920001	chr2R_18920001	0.52	RAL-340_100b
720	chr2R	18999167	18999380	flea	5000	245	10	213	'6-4	65.09	19.0	0.5	intron	tn +	chr2R_10_18995001	chr2R_18995001	0.60	RAL-340_100b
721	chr2R	19178085	19178132	accord	7010	218	4	47	'1-3	67.50	28.0	0.1	3` UTR	CG10737 +	chr2R_4_19175001	chr2R_19175001	0.25	RAL-340_100b
722	chr2R	19206788	19207282	I-element	4918	268	4	494	'3-1	63.93	18.3	0.2	intron	hppy +	chr2R_4_19205001	chr2R_19205001	0.75	RAL-340_100b
723	chr2R	19320691	19320800	F-element	4482	4436	4	109	'2-2	71.22	17.3	0.2	intron	Rgk1 -	chr2R_4_19320001	chr2R_19320001	0.50	RAL-340_100b
724	chr2R	19321482	19321580	Doc2-element	251	250	4	98	'3-1	73.30	19.7	0.2	intron	Rgk1 -	chr2R_4_19320001	chr2R_19320001	0.75	RAL-340_100b
725	chr2R	19446513	19447051	HMS-Beagle	246	1	32	538	'9-23	63.65	9.8	3.0	intergenic	EloC -	chr2R_32_19445001	chr2R_19445001	0.28	RAL-340_100b
726	chr2R	19464568	19464765	G2	2824	2865	4	197	'2-2	66.42	34.6	0.1	intron	par-1 +	chr2R_4_19460001	chr2R_19460001	0.50	RAL-340_100b
727	chr2R	19531032	19531346	hobo	1	2923	57	314	'54-3	64.47	12.4	4.3	intron	sm -	chr2R_57_19530001	chr2R_19530001	0.95	RAL-340_100b
728	chr2R	19728636	19728802	S2	1564	1706	5	166	'2-3	68.19	11.7	0.4	intergenic	not near genes	chr2R_5_19725001	chr2R_19725001	0.40	RAL-340_100b
729	chr2R	20183293	20183573	Tirant	207	8395	60	280	'41-19	67.28	13.5	4.1	intergenic	not near genes	chr2R_60_20180001	chr2R_20180001	0.68	RAL-340_100b
730	chr2R	20203466	20203866	297	6606	394	41	400	'21-20	66.47	12.8	3.0	intergenic	not near genes	chr2R_41_20200001	chr2R_20200001	0.51	RAL-340_100b
731	chr2R	20315913	20316040	Gypsy6A_LTR	173	171	27	127	'1-26	65.90	11.7	2.1	intron,5` UTR	CG13868 -,CR44642 +	chr2R_27_20315001	chr2R_20315001	0.04	RAL-340_100b
732	chr2R	20315919	20315964	gypsy6	7416	7463	14	45	'11-3	59.85	12.4	1.0	intron,5` UTR	CG13868 -,CR44642 +	chr2R_14_20315001	chr2R_20315001	0.79	RAL-340_100b
733	chr2R	20453661	20453808	accord	179	7026	5	147	'2-3	70.98	33.8	0.1	intron	CG12484 +	chr2R_5_20450001	chr2R_20450001	0.40	RAL-340_100b
734	chr2R	20670351	20670580	1731	4390	4495	5	229	'2-3	68.80	13.8	0.3	5` UTR	exu -	chr2R_5_20670001	chr2R_20670001	0.40	RAL-340_100b
735	chr2R	20832511	20832705	looper1	1616	1616	4	194	'3-1	73.72	8.8	0.4	intron,intron	insc -,sktl -	chr2R_4_20830001	chr2R_20830001	0.75	RAL-340_100b
736	chr2R	20840699	20840955	hobo	4	2890	48	256	'47-1	67.01	10.9	4.0	intergenic	not near genes	chr2R_48_20840001	chr2R_20840001	0.98	RAL-340_100b
737	chr2R	20853185	20853308	412	493	3	45	123	'26-19	63.27	10.1	4.1	intergenic	not near genes	chr2R_45_20850001	chr2R_20850001	0.58	RAL-340_100b
738	chr2R	20877281	20877534	Tc3	310	315	8	253	'7-1	60.47	4.6	1.4	exon	Ipk1 +	chr2R_8_20875001	chr2R_20875001	0.88	RAL-340_100b
739	chr2R	20899173	20899201	accord	187	7032	5	28	'3-2	71.49	24.3	0.2	intron	otp -	chr2R_5_20895001	chr2R_20895001	0.60	RAL-340_100b
740	chr2R	20968697	20968995	roo	8796	391	23	298	'22-1	67.78	10.2	2.1	intergenic	not near genes	chr2R_23_20965001	chr2R_20965001	0.96	RAL-340_100b
741	chr2R	21028431	21028578	Idefix	6933	32	6	147	'3-3	65.80	15.9	0.4	intergenic	not near genes	chr2R_6_21025001	chr2R_21025001	0.50	RAL-340_100b
742	chr2R	21056746	21057126	P-element	2781	2855	92	380	'87-5	47.70	14.3	6.0	5` UTR	shg -	chr2R_92_21055001	chr2R_21055001	0.95	RAL-340_100b
743	chr2R	21072478	21072536	412	7501	495	10	58	'8-2	71.56	9.6	0.9	intron	CG10527 -	chr2R_10_21070001	chr2R_21070001	0.80	RAL-340_100b
744	chr2R	21239343	21239444	INE-1	14	542	4	101	'1-3	75.06	21.9	0.2	intron	ASPP -	chr2R_4_21235001	chr2R_21235001	0.25	RAL-340_100b
745	chr2R	21247922	21248158	F-element	340	4448	4	236	'2-2	66.62	20.1	0.2	intron	ASPP -	chr2R_4_21245001	chr2R_21245001	0.50	RAL-340_100b
746	chr2R	21421516	21421639	Quasimodo	39	41	4	123	'2-2	74.92	30.8	0.1	intron	Sdc -	chr2R_4_21420001	chr2R_21420001	0.50	RAL-340_100b
747	chr2R	21425063	21425091	G2	2936	3054	4	28	'1-3	58.00	2.7	1.1	intron	Sdc -	chr2R_4_21425001	chr2R_21425001	0.25	RAL-340_100b
748	chr2R	21478499	21478813	FB	42	33	63	314	'42-21	65.61	10.1	5.7	intron	Sdc -	chr2R_63_21475001	chr2R_21475001	0.67	RAL-340_100b
749	chr2R	21496463	21496754	P-element	113	2768	10	291	'7-3	63.53	13.4	0.7	intron	Fkbp14 -	chr2R_10_21495001	chr2R_21495001	0.70	RAL-340_100b
750	chr2R	21612304	21612568	mdg1	17	410	46	264	'33-13	63.11	7.9	5.2	intron	CG15673 -	chr2R_46_21610001	chr2R_21610001	0.72	RAL-340_100b
751	chr2R	21661724	21662173	P-element	3	2850	42	449	'27-15	50.89	14.3	2.7	exon	pirk -	chr2R_42_21660001	chr2R_21660001	0.64	RAL-340_100b
752	chr2R	21775405	21775470	copia	4929	4875	8	65	'2-6	62.30	28.2	0.3	intergenic	not near genes	chr2R_8_21775001	chr2R_21775001	0.25	RAL-340_100b
753	chr2R	21775851	21776045	copia	110	247	36	194	'25-11	67.20	6.7	4.7	intergenic	not near genes	chr2R_36_21775001	chr2R_21775001	0.69	RAL-340_100b
754	chr2R	22009046	22009408	roo	8708	9030	60	362	'25-35	66.65	12.8	4.3	intron	CG34370 -	chr2R_60_22005001	chr2R_22005001	0.42	RAL-340_100b
755	chr2R	22122541	22122748	I-element	250	462	5	207	'2-3	76.63	19.4	0.2	5` UTR,intron	Vrp1 -,mei-S332 +	chr2R_5_22120001	chr2R_22120001	0.40	RAL-340_100b
756	chr2R	22195167	22195514	mdg1	7391	21	41	347	'19-22	66.82	10.2	3.7	intron	Swim -	chr2R_41_22195001	chr2R_22195001	0.46	RAL-340_100b
757	chr2R	22267904	22268286	412	411	16	39	382	'34-5	65.21	19.5	1.9	intron	dve +	chr2R_39_22265001	chr2R_22265001	0.87	RAL-340_100b
758	chr2R	22317150	22317438	BS	5069	5074	19	288	'16-3	59.86	4.5	3.5	intergenic	not near genes	chr2R_19_22315001	chr2R_22315001	0.84	RAL-340_100b
759	chr2R	22465543	22465671	BS	4990	5078	7	128	'6-1	71.98	8.9	0.7	intron	CG10384 +	chr2R_7_22465001	chr2R_22465001	0.86	RAL-340_100b
760	chr2R	22768322	22768544	jockey	4976	4839	14	222	'3-11	66.55	19.6	0.7	intron	CG42260 -	chr2R_14_22765001	chr2R_22765001	0.21	RAL-340_100b
761	chr2R	22791722	22792088	jockey	31	4969	46	366	'23-23	63.75	9.8	4.3	intron	CG42260 -	chr2R_46_22790001	chr2R_22790001	0.50	RAL-340_100b
762	chr2R	22834866	22835133	pogo	51	2035	9	267	'8-1	71.24	11.5	0.7	intron	CG12490 +	chr2R_9_22830001	chr2R_22830001	0.89	RAL-340_100b
763	chr2R	22934002	22934163	Doc	4481	410	4	161	'2-2	72.09	26.1	0.1	5` UTR	CG3788 -	chr2R_4_22930001	chr2R_22930001	0.50	RAL-340_100b
764	chr2R	23000156	23000264	FB	722	395	34	108	'3-31	74.77	8.2	3.7	intron	twi +	chr2R_34_23000001	chr2R_23000001	0.09	RAL-340_100b
765	chr2R	23000640	23000902	hopper	1	1366	52	262	'50-2	65.17	19.9	2.5	intron	twi +	chr2R_52_23000001	chr2R_23000001	0.96	RAL-340_100b
766	chr2R	23205620	23206003	FB	11	40	4	383	'3-1	71.94	23.3	0.2	intergenic	not near genes	chr2R_4_23205001	chr2R_23205001	0.75	RAL-340_100b
767	chr2R	23300978	23301374	copia	26	217	41	396	'3-38	67.81	9.3	4.0	intergenic	not near genes	chr2R_41_23300001	chr2R_23300001	0.07	RAL-340_100b
768	chr2R	23580205	23580409	I-element	196	5115	5	204	'1-4	68.22	44.1	0.1	intron	apt +	chr2R_5_23580001	chr2R_23580001	0.20	RAL-340_100b
769	chr2R	23695220	23695373	F-element	4507	4409	5	153	'4-1	60.23	21.6	0.2	intron,3` UTR	CG30183 -,angel +	chr2R_5_23695001	chr2R_23695001	0.80	RAL-340_100b
770	chr2R	23877566	23877754	297	6631	181	5	188	'3-2	77.18	12.0	0.4	intergenic	ken +	chr2R_5_23875001	chr2R_23875001	0.60	RAL-340_100b
771	chr2R	23992218	23992579	rover	6992	7235	64	361	'31-33	69.31	14.5	4.1	3` UTR	CG3860 -	chr2R_64_23990001	chr2R_23990001	0.48	RAL-340_100b
772	chr2R	24021496	24021668	pogo	50	2097	41	172	'20-21	65.69	10.9	3.4	exon	CG3907 -	chr2R_41_24020001	chr2R_24020001	0.49	RAL-340_100b
773	chr2R	24229601	24229965	blood	7180	7195	5	364	'1-4	78.91	35.4	0.1	5` UTR	CG30419 -	chr2R_5_24225001	chr2R_24225001	0.20	RAL-340_100b
774	chr2R	24290437	24290902	Gypsy12A_LTR	1817	1816	4	465	'2-2	65.50	25.1	0.2	3` UTR	nvy +	chr2R_4_24290001	chr2R_24290001	0.50	RAL-340_100b
775	chr2R	24293284	24293526	hobo	2683	100	43	242	'19-24	62.19	25.5	1.6	intergenic	not near genes	chr2R_43_24290001	chr2R_24290001	0.44	RAL-340_100b
776	chr2R	25051929	25051982	G5A	2778	2767	6	53	'3-3	70.39	29.7	0.2	intron	gsb-n -	chr2R_6_25050001	chr2R_25050001	0.50	RAL-340_100b
777	chr2R	25231246	25231520	HMS-Beagle	247	69	74	274	'73-1	66.85	15.2	4.6	intron,3` UTR	CG9380 -,Kr +	chr2R_74_25230001	chr2R_25230001	0.99	RAL-340_100b
778	chr2R	25240072	25240203	INE-1	86	116	12	131	'1-11	61.48	8.8	1.2	intron	CG9380 -	chr2R_12_25240001	chr2R_25240001	0.08	RAL-340_100b
779	chr2R	25254521	25254845	INE-1	546	540	5	324	'4-1	70.82	14.4	0.3	intron,3` UTR	CG9380 -,CG30428 +	chr2R_5_25250001	chr2R_25250001	0.80	RAL-340_100b
780	chr3L	32367	32585	roo	8716	2	34	218	'32-2	68.62	10.7	2.9	intergenic	not near genes	chr3L_34_30001	chr3L_30001	0.94	RAL-340_100b
781	chr3L	39247	39446	INE-1	517	545	4	199	'1-3	67.51	22.7	0.2	intergenic	not near genes	chr3L_4_35001	chr3L_35001	0.25	RAL-340_100b
782	chr3L	45261	45325	INE-1	142	152	5	64	'4-1	74.00	29.0	0.2	intergenic	not near genes	chr3L_5_45001	chr3L_45001	0.80	RAL-340_100b
783	chr3L	99964	100344	INE-1	577	155	6	380	'4-2	77.46	19.9	0.3	intergenic	not near genes	chr3L_6_95001	chr3L_95001	0.67	RAL-340_100b
784	chr3L	223297	223421	FB	120	12	39	124	'6-33	65.80	15.9	2.3	intergenic	pyx -	chr3L_39_220001	chr3L_220001	0.15	RAL-340_100b
785	chr3L	277684	277786	I-element	5260	5300	19	102	'2-17	66.03	13.8	1.3	5` UTR	RhoGEF3 +	chr3L_19_275001	chr3L_275001	0.11	RAL-340_100b
786	chr3L	292270	292465	pogo	2047	2091	48	195	'17-31	65.09	11.7	3.8	intron	RhoGEF3 +	chr3L_48_290001	chr3L_290001	0.35	RAL-340_100b
787	chr3L	543949	544172	P-element	2877	2838	45	223	'7-38	49.52	11.8	3.5	intergenic	not near genes	chr3L_45_540001	chr3L_540001	0.16	RAL-340_100b
788	chr3L	590287	590663	F-element	4453	242	5	376	'3-2	65.64	17.5	0.3	intergenic	not near genes	chr3L_5_590001	chr3L_590001	0.60	RAL-340_100b
789	chr3L	693009	693274	S-element	1661	1710	24	265	'3-21	67.61	8.8	2.4	intergenic	CG13894 -,Vti1 -	chr3L_24_690001	chr3L_690001	0.12	RAL-340_100b
790	chr3L	708193	708277	P-element	2851	3	4	84	'3-1	49.80	18.3	0.2	5` UTR	CG13895 -	chr3L_4_705001	chr3L_705001	0.75	RAL-340_100b
791	chr3L	775088	775162	Doc	26	4509	18	74	'15-3	61.73	8.2	2.0	intergenic	not near genes	chr3L_18_775001	chr3L_775001	0.83	RAL-340_100b
792	chr3L	968414	968771	hopper	1412	1399	50	357	'44-6	65.13	12.7	3.6	intron	Glut1 +	chr3L_50_965001	chr3L_965001	0.88	RAL-340_100b
793	chr3L	993831	994073	412	66	8	49	242	'2-47	66.12	6.1	6.9	intergenic	CG12038 +	chr3L_49_990001	chr3L_990001	0.04	RAL-340_100b
794	chr3L	1102284	1102575	P-element	48	2819	74	291	'11-63	46.78	15.7	4.4	intergenic	not near genes	chr3L_74_1100001	chr3L_1100001	0.15	RAL-340_100b
795	chr3L	1171118	1171308	flea	4761	196	76	190	'46-30	65.74	18.3	3.9	intron	bab2 -	chr3L_76_1170001	chr3L_1170001	0.61	RAL-340_100b
796	chr3L	1490066	1490317	1360	20	3332	4	251	'3-1	73.95	18.0	0.2	intergenic	not near genes	chr3L_4_1490001	chr3L_1490001	0.75	RAL-340_100b
797	chr3L	1491026	1491271	1360	3261	3386	14	245	'12-2	69.21	15.1	0.9	3` UTR	CG12084 -	chr3L_14_1490001	chr3L_1490001	0.86	RAL-340_100b
798	chr3L	1590179	1590517	FB	12	3	78	338	'3-75	65.15	10.7	6.7	intron	CG13917 +	chr3L_78_1590001	chr3L_1590001	0.04	RAL-340_100b
799	chr3L	1805662	1805928	invader3	5050	5049	7	266	'4-3	69.62	14.0	0.5	exon	CG42676 +	chr3L_7_1805001	chr3L_1805001	0.57	RAL-340_100b
800	chr3L	1914356	1914640	jockey	9	4972	33	284	'30-3	66.97	12.4	2.5	intergenic	not near genes	chr3L_33_1910001	chr3L_1910001	0.91	RAL-340_100b
801	chr3L	2016827	2017182	jockey	29	4928	23	355	'16-7	66.84	12.3	1.7	intergenic	not near genes	chr3L_23_2015001	chr3L_2015001	0.70	RAL-340_100b
802	chr3L	2052800	2052998	I-element	5196	4882	4	198	'1-3	73.94	47.7	0.1	exon	sls -	chr3L_4_2050001	chr3L_2050001	0.25	RAL-340_100b
803	chr3L	2123030	2123062	mdg1	43	7081	4	32	'3-1	68.39	24.7	0.2	intron	zormin -	chr3L_4_2120001	chr3L_2120001	0.75	RAL-340_100b
804	chr3L	2179403	2179634	Transpac	35	5227	55	231	'10-45	68.39	5.9	8.0	intergenic	not near genes	chr3L_55_2175001	chr3L_2175001	0.18	RAL-340_100b
805	chr3L	2295757	2295929	F-element	401	4441	4	172	'2-2	72.05	22.2	0.2	intron	MsR2 +	chr3L_4_2295001	chr3L_2295001	0.50	RAL-340_100b
806	chr3L	2365545	2365843	mdg1	7440	38	63	298	'50-13	64.00	11.2	5.2	intergenic	not near genes	chr3L_63_2365001	chr3L_2365001	0.79	RAL-340_100b
807	chr3L	2376489	2376598	mdg1	7067	7067	6	109	'5-1	69.52	9.5	0.6	3` UTR	CG15877 -	chr3L_6_2375001	chr3L_2375001	0.83	RAL-340_100b
808	chr3L	2613253	2613577	roo	54	407	46	324	'22-24	68.50	7.1	5.7	intron	Pxn -	chr3L_46_2610001	chr3L_2610001	0.48	RAL-340_100b
809	chr3L	2627542	2627659	transib1	1932	1933	4	117	'3-1	77.10	30.3	0.1	intron	Pxn -	chr3L_4_2625001	chr3L_2625001	0.75	RAL-340_100b
810	chr3L	2787071	2787287	accord	186	160	4	216	'3-1	65.84	40.1	0.1	3` UTR	CG43444 -	chr3L_4_2785001	chr3L_2785001	0.75	RAL-340_100b
811	chr3L	2844205	2844430	hobo	2916	202	43	225	'13-30	64.13	16.8	2.4	intron	CG43444 -	chr3L_43_2840001	chr3L_2840001	0.30	RAL-340_100b
812	chr3L	2888623	2888840	blood	7020	7304	53	217	'39-14	66.13	7.3	6.4	intron	spz5 -	chr3L_53_2885001	chr3L_2885001	0.74	RAL-340_100b
813	chr3L	3076556	3076898	jockey	4987	4806	48	342	'5-43	64.78	10.8	4.1	intron	CG11486 +	chr3L_48_3075001	chr3L_3075001	0.10	RAL-340_100b
814	chr3L	3640939	3641408	copia	253	4909	152	469	'102-50	67.83	11.3	12.4	intron	dar1 +	chr3L_152_3640001	chr3L_3640001	0.67	RAL-340_100b
815	chr3L	3798541	3798663	1360	3267	18	55	122	'37-18	63.56	9.4	5.3	intron	CG32264 -	chr3L_55_3795001	chr3L_3795001	0.67	RAL-340_100b
816	chr3L	4001105	4001227	accord	7029	7027	4	122	'3-1	69.88	71.2	0.1	intergenic	not near genes	chr3L_4_4000001	chr3L_4000001	0.75	RAL-340_100b
817	chr3L	4021506	4021537	P-element	138	15	4	31	'1-3	52.63	25.9	0.1	5` UTR	Mul1 +	chr3L_4_4020001	chr3L_4020001	0.25	RAL-340_100b
818	chr3L	4437264	4437753	R1A1-element	5007	5002	4	489	'2-2	71.29	51.1	0.1	exon	CG15021 +	chr3L_4_4435001	chr3L_4435001	0.50	RAL-340_100b
819	chr3L	4572090	4572197	F-element	4413	4410	4	107	'1-3	67.35	35.1	0.1	intron	CG42540 +	chr3L_4_4570001	chr3L_4570001	0.25	RAL-340_100b
820	chr3L	4692551	4692894	P-element	71	2796	60	343	'22-38	49.52	13.9	4.0	intergenic	RhoGEF64C +	chr3L_60_4690001	chr3L_4690001	0.37	RAL-340_100b
821	chr3L	4716827	4716925	1731	4408	4410	6	98	'2-4	65.81	14.5	0.4	intron	RhoGEF64C +	chr3L_6_4715001	chr3L_4715001	0.33	RAL-340_100b
822	chr3L	4743533	4744051	accord	180	185	12	518	'3-9	72.28	20.3	0.6	intron	RhoGEF64C +	chr3L_12_4740001	chr3L_4740001	0.25	RAL-340_100b
823	chr3L	4759538	4759695	hobo	2728	2708	56	157	'31-25	64.12	12.8	4.1	intron	RhoGEF64C +	chr3L_56_4755001	chr3L_4755001	0.55	RAL-340_100b
824	chr3L	4776875	4777342	copia	3	5093	56	467	'18-38	65.46	13.4	3.9	intron	RhoGEF64C +	chr3L_56_4775001	chr3L_4775001	0.32	RAL-340_100b
825	chr3L	4948046	4948274	jockey	4679	4984	32	228	'1-31	59.93	12.4	2.4	intron	Con -	chr3L_32_4945001	chr3L_4945001	0.03	RAL-340_100b
826	chr3L	4967316	4967434	hobo	2926	191	39	118	'11-28	62.99	12.9	2.8	intron	Con -	chr3L_39_4965001	chr3L_4965001	0.28	RAL-340_100b
827	chr3L	4976279	4976533	P-element	115	2807	61	254	'46-15	48.50	10.9	5.1	intron	Con -	chr3L_61_4975001	chr3L_4975001	0.75	RAL-340_100b
828	chr3L	5128460	5128546	P-element	344	274	4	86	'1-3	55.75	18.9	0.2	intergenic	not near genes	chr3L_4_5125001	chr3L_5125001	0.25	RAL-340_100b
829	chr3L	5228440	5228758	F-element	4258	377	4	318	'3-1	61.00	13.4	0.3	intron	shep -	chr3L_4_5225001	chr3L_5225001	0.75	RAL-340_100b
830	chr3L	5266769	5266870	accord	178	7030	8	101	'5-3	78.72	22.3	0.3	intron	shep -	chr3L_8_5265001	chr3L_5265001	0.62	RAL-340_100b
831	chr3L	5266932	5267039	297	295	6939	11	107	'1-10	68.78	21.5	0.5	intron	shep -	chr3L_11_5265001	chr3L_5265001	0.09	RAL-340_100b
832	chr3L	5309496	5309655	jockey	10	4949	7	159	'5-2	62.83	13.4	0.5	intergenic	not near genes	chr3L_7_5305001	chr3L_5305001	0.71	RAL-340_100b
833	chr3L	5368966	5369237	pogo	90	1995	29	271	'13-16	70.83	11.2	2.4	intergenic	CR44515 +	chr3L_29_5365001	chr3L_5365001	0.45	RAL-340_100b
834	chr3L	5669897	5670149	roo	8989	110	61	252	'29-32	67.56	11.4	4.9	intron	sif +	chr3L_61_5665001	chr3L_5665001	0.48	RAL-340_100b
835	chr3L	5695345	5695639	jockey	4828	4826	4	294	'1-3	48.62	12.5	0.3	intron	sif +	chr3L_4_5695001	chr3L_5695001	0.25	RAL-340_100b
836	chr3L	5752020	5752374	P-element	2879	54	49	354	'30-19	45.28	13.4	3.4	5` UTR	DnaJ-1 -	chr3L_49_5750001	chr3L_5750001	0.61	RAL-340_100b
837	chr3L	5835589	5835635	accord	216	175	4	46	'1-3	70.33	32.8	0.1	intron	vn -	chr3L_4_5835001	chr3L_5835001	0.25	RAL-340_100b
838	chr3L	5903662	5904028	412	7090	491	39	366	'10-29	65.94	10.9	3.3	exon	CG32413 -	chr3L_39_5900001	chr3L_5900001	0.26	RAL-340_100b
839	chr3L	6014939	6015166	hopper	102	1413	33	227	'1-32	61.80	15.5	2.0	intron	PVRAP +	chr3L_33_6010001	chr3L_6010001	0.03	RAL-340_100b
840	chr3L	6015116	6015189	hopper2	1556	1475	4	73	'3-1	73.88	25.0	0.2	intron	PVRAP +	chr3L_4_6015001	chr3L_6015001	0.75	RAL-340_100b
841	chr3L	6067044	6067383	I-element	5308	5195	54	339	'22-32	66.49	11.2	4.4	intron	CG42269 +	chr3L_54_6065001	chr3L_6065001	0.41	RAL-340_100b
842	chr3L	6217903	6218311	P-element	325	2853	78	408	'59-19	43.09	14.8	4.9	5` UTR	LanA -	chr3L_78_6215001	chr3L_6215001	0.76	RAL-340_100b
843	chr3L	6218602	6218725	P-element	21	2814	12	123	'6-6	42.74	16.8	0.7	intergenic	not near genes	chr3L_12_6215001	chr3L_6215001	0.50	RAL-340_100b
844	chr3L	6315601	6315753	INE-1	572	537	13	152	'11-2	62.81	13.6	0.9	intergenic	not near genes	chr3L_13_6315001	chr3L_6315001	0.85	RAL-340_100b
845	chr3L	6653789	6653923	Idefix	7386	71	16	134	'7-9	66.72	7.4	1.9	intergenic	not near genes	chr3L_16_6650001	chr3L_6650001	0.44	RAL-340_100b
846	chr3L	6879009	6879195	F-element	4511	4525	5	186	'2-3	61.92	15.2	0.3	intergenic	not near genes	chr3L_5_6875001	chr3L_6875001	0.40	RAL-340_100b
847	chr3L	7196808	7197003	blood	7301	7180	24	195	'13-11	63.72	6.6	3.2	intergenic	not near genes	chr3L_24_7195001	chr3L_7195001	0.54	RAL-340_100b
848	chr3L	7207771	7208030	HMS-Beagle	234	6992	42	259	'8-34	68.23	18.3	2.2	intergenic	not near genes	chr3L_42_7205001	chr3L_7205001	0.19	RAL-340_100b
849	chr3L	7410534	7410767	gypsy7	5019	5016	6	233	'1-5	60.30	9.5	0.6	intergenic	not near genes	chr3L_6_7410001	chr3L_7410001	0.17	RAL-340_100b
850	chr3L	7444735	7445167	roo	405	46	71	432	'33-38	68.82	10.3	6.3	intron	CG42458 +	chr3L_71_7440001	chr3L_7440001	0.46	RAL-340_100b
851	chr3L	7463314	7463483	jockey	56	68	18	169	'15-3	65.55	11.0	1.5	intergenic	not near genes	chr3L_18_7460001	chr3L_7460001	0.83	RAL-340_100b
852	chr3L	7744060	7744093	flea	5003	5003	4	33	'2-2	65.40	46.8	0.1	intron	CG32373 +	chr3L_4_7740001	chr3L_7740001	0.50	RAL-340_100b
853	chr3L	7885236	7885599	FB	65	37	39	363	'26-13	67.67	9.1	3.9	intron	CG32365 +	chr3L_39_7885001	chr3L_7885001	0.67	RAL-340_100b
854	chr3L	7986759	7986942	FB	804	741	12	183	'7-5	64.75	11.7	0.9	intron	nmo +	chr3L_12_7985001	chr3L_7985001	0.58	RAL-340_100b
855	chr3L	8333812	8334228	F-element	91	4244	5	416	'2-3	70.67	15.2	0.3	intergenic	not near genes	chr3L_5_8330001	chr3L_8330001	0.40	RAL-340_100b
856	chr3L	8397814	8397918	Tc1-2	1588	1596	4	104	'3-1	69.97	15.0	0.2	intron	CG7120 +	chr3L_4_8395001	chr3L_8395001	0.75	RAL-340_100b
857	chr3L	8708713	8708766	F-element	4641	4568	4	53	'2-2	70.92	23.4	0.2	intergenic	not near genes	chr3L_4_8705001	chr3L_8705001	0.50	RAL-340_100b
858	chr3L	8894094	8894127	transib1	1890	1891	4	33	'3-1	62.66	37.5	0.1	exon	Mcm7 +	chr3L_4_8890001	chr3L_8890001	0.75	RAL-340_100b
859	chr3L	9015082	9015217	springer	15	7525	17	135	'6-11	64.59	2.4	5.0	intron	Doc2 -	chr3L_17_9015001	chr3L_9015001	0.35	RAL-340_100b
860	chr3L	9102757	9102885	springer	6	195	26	128	'20-6	64.60	42.3	0.6	exon	bol -	chr3L_26_9100001	chr3L_9100001	0.77	RAL-340_100b
861	chr3L	9111168	9111493	mdg1	7068	38	4	325	'3-1	72.08	15.8	0.2	intron	bol -	chr3L_4_9110001	chr3L_9110001	0.75	RAL-340_100b
862	chr3L	9136054	9136313	pogo	2082	2087	8	259	'5-3	64.19	8.5	0.8	intron	Use1 -	chr3L_8_9135001	chr3L_9135001	0.62	RAL-340_100b
863	chr3L	9183561	9183641	accord	182	180	4	80	'3-1	67.19	32.4	0.1	intergenic	not near genes	chr3L_4_9180001	chr3L_9180001	0.75	RAL-340_100b
864	chr3L	9261424	9261697	297	6638	315	22	273	'6-16	69.56	8.0	2.4	intron	GluRIB +	chr3L_22_9260001	chr3L_9260001	0.27	RAL-340_100b
865	chr3L	9425052	9425135	FB	6	90	4	83	'1-3	70.25	23.6	0.2	intron	CG3967 -	chr3L_4_9425001	chr3L_9425001	0.25	RAL-340_100b
866	chr3L	9440261	9440333	INE-1	542	549	4	72	'3-1	66.47	23.6	0.2	intron,3` UTR	Bet3 -,Nf-YA -	chr3L_4_9440001	chr3L_9440001	0.75	RAL-340_100b
867	chr3L	9445298	9445379	S-element	215	1560	4	81	'3-1	66.45	16.5	0.2	intron	CG33926 +	chr3L_4_9445001	chr3L_9445001	0.75	RAL-340_100b
868	chr3L	9501439	9501669	HMS-Beagle2	45	309	38	230	'8-30	63.49	8.2	4.1	intron	path -	chr3L_38_9500001	chr3L_9500001	0.21	RAL-340_100b
869	chr3L	9594181	9594546	Stalker2	406	79	85	365	'12-73	66.62	11.2	7.0	intron	CG42673 +	chr3L_85_9590001	chr3L_9590001	0.14	RAL-340_100b
870	chr3L	9657613	9657880	hobo	2709	4	43	267	'37-6	63.20	15.4	2.6	intron,intron	fry -,CG33696 +	chr3L_43_9655001	chr3L_9655001	0.86	RAL-340_100b
871	chr3L	9661080	9661535	1360	31	3383	83	455	'29-54	68.78	14.0	5.5	intron	fry -	chr3L_83_9660001	chr3L_9660001	0.35	RAL-340_100b
872	chr3L	9763231	9763522	pogo	17	1966	42	291	'16-26	68.30	12.2	3.2	intergenic	CG8177 +	chr3L_42_9760001	chr3L_9760001	0.38	RAL-340_100b
873	chr3L	9917388	9917692	copia	255	2	42	304	'2-40	66.65	13.0	3.0	intron	CG34356 +	chr3L_42_9915001	chr3L_9915001	0.05	RAL-340_100b
874	chr3L	10020363	10020451	Idefix	38	7389	9	88	'4-5	72.19	18.9	0.5	intron	dpr6 +	chr3L_9_10020001	chr3L_10020001	0.44	RAL-340_100b
875	chr3L	10053000	10053171	accord	189	190	4	171	'3-1	82.43	16.9	0.2	intron	dpr6 +	chr3L_4_10050001	chr3L_10050001	0.75	RAL-340_100b
876	chr3L	10085303	10085770	17.6	6946	493	25	467	'6-19	67.02	10.4	2.2	intron	dpr6 +	chr3L_25_10085001	chr3L_10085001	0.24	RAL-340_100b
877	chr3L	10723513	10723656	Juan	4061	4061	5	143	'2-3	74.20	11.1	0.4	intergenic	not near genes	chr3L_5_10720001	chr3L_10720001	0.40	RAL-340_100b
878	chr3L	10728603	10728723	accord	306	7057	4	120	'1-3	71.85	35.8	0.1	intergenic	not near genes	chr3L_4_10725001	chr3L_10725001	0.25	RAL-340_100b
879	chr3L	11284386	11284859	F-element	86	4314	5	473	'1-4	64.92	24.7	0.2	intergenic	CR45404 +	chr3L_5_11280001	chr3L_11280001	0.20	RAL-340_100b
880	chr3L	11314205	11314528	Tc3	317	318	6	323	'1-5	39.50	6.4	0.8	intergenic	not near genes	chr3L_6_11310001	chr3L_11310001	0.17	RAL-340_100b
881	chr3L	11350273	11350758	1360	3	3379	76	485	'52-24	66.20	9.9	7.0	intergenic	not near genes	chr3L_76_11350001	chr3L_11350001	0.68	RAL-340_100b
882	chr3L	11520060	11520327	opus	166	497	31	267	'1-30	64.75	7.9	3.5	intron	Fuca -	chr3L_31_11520001	chr3L_11520001	0.03	RAL-340_100b
883	chr3L	11544038	11544081	invader2	485	4719	4	43	'3-1	68.71	29.7	0.1	intron	Mob2 -	chr3L_4_11540001	chr3L_11540001	0.75	RAL-340_100b
884	chr3L	11801220	11801342	Stalker2	2	7644	27	122	'17-10	65.01	9.9	2.5	intergenic	CG10361 -	chr3L_27_11800001	chr3L_11800001	0.63	RAL-340_100b
885	chr3L	12054339	12054451	hopper	141	139	8	112	'4-4	50.45	4.1	1.6	intron	rols -	chr3L_8_12050001	chr3L_12050001	0.50	RAL-340_100b
886	chr3L	12169194	12169382	F-element	4649	4647	5	188	'4-1	67.65	12.4	0.4	intron	Rh7 -	chr3L_5_12165001	chr3L_12165001	0.80	RAL-340_100b
887	chr3L	12263057	12263345	HMS-Beagle2	396	395	4	288	'1-3	62.56	14.5	0.3	intron	app -	chr3L_4_12260001	chr3L_12260001	0.25	RAL-340_100b
888	chr3L	12379704	12379817	G2	3047	3013	7	113	'6-1	72.08	26.2	0.3	intron	Ncc69 -	chr3L_7_12375001	chr3L_12375001	0.86	RAL-340_100b
889	chr3L	12863447	12863787	Transpac	4942	303	51	340	'6-45	68.21	12.0	3.9	intergenic	not near genes	chr3L_51_12860001	chr3L_12860001	0.12	RAL-340_100b
890	chr3L	12951956	12952215	Juan	4089	4157	12	259	'1-11	62.14	7.1	1.5	intergenic	not near genes	chr3L_12_12950001	chr3L_12950001	0.08	RAL-340_100b
891	chr3L	13044610	13044732	Doc	4480	4493	5	122	'3-2	71.53	31.4	0.2	intron	Syx13 +	chr3L_5_13040001	chr3L_13040001	0.60	RAL-340_100b
892	chr3L	13054834	13054887	transib2	99	99	4	53	'1-3	72.82	13.7	0.3	intergenic	not near genes	chr3L_4_13050001	chr3L_13050001	0.25	RAL-340_100b
893	chr3L	13244698	13244970	Doc	70	4616	38	272	'33-5	63.66	14.1	2.5	intron	caps +	chr3L_38_13240001	chr3L_13240001	0.87	RAL-340_100b
894	chr3L	13360207	13360419	297	278	6587	27	212	'14-13	65.21	10.9	2.3	intergenic	not near genes	chr3L_27_13360001	chr3L_13360001	0.52	RAL-340_100b
895	chr3L	13428142	13428328	INE-1	576	533	9	186	'6-3	52.54	20.7	0.4	intergenic	not near genes	chr3L_9_13425001	chr3L_13425001	0.67	RAL-340_100b
896	chr3L	13553052	13553317	jockey	4655	4923	4	265	'3-1	72.30	7.2	0.5	intron	bru-3 -	chr3L_4_13550001	chr3L_13550001	0.75	RAL-340_100b
897	chr3L	13661302	13661602	hobo	9	2810	43	300	'1-42	66.59	11.4	3.5	intron	bru-3 -	chr3L_43_13660001	chr3L_13660001	0.02	RAL-340_100b
898	chr3L	13830759	13830874	hobo	17	106	15	115	'14-1	60.57	11.9	1.2	intergenic	not near genes	chr3L_15_13830001	chr3L_13830001	0.93	RAL-340_100b
899	chr3L	14226041	14226192	mdg1	19	7056	4	151	'1-3	71.28	15.4	0.2	intron	nuf +	chr3L_4_14225001	chr3L_14225001	0.25	RAL-340_100b
900	chr3L	14271845	14272190	3S18	5856	308	31	345	'15-16	68.52	11.0	2.6	intergenic	not near genes	chr3L_31_14270001	chr3L_14270001	0.48	RAL-340_100b
901	chr3L	14323581	14323881	1360	172	3357	56	300	'54-2	67.19	8.7	5.8	intron,intron	fz +,CR45025 -	chr3L_56_14320001	chr3L_14320001	0.96	RAL-340_100b
902	chr3L	14326984	14327130	1360	3387	38	55	146	'40-15	65.55	17.5	3.0	intron	fz +	chr3L_55_14325001	chr3L_14325001	0.73	RAL-340_100b
903	chr3L	14344930	14345247	roo	8683	9037	40	317	'5-35	65.65	10.1	3.6	intron	fz +	chr3L_40_14340001	chr3L_14340001	0.12	RAL-340_100b
904	chr3L	14442873	14443044	P-element	14	2831	9	171	'6-3	53.00	16.2	0.5	intron	bbg -	chr3L_9_14440001	chr3L_14440001	0.67	RAL-340_100b
905	chr3L	14503996	14504279	INE-1	12	105	5	283	'2-3	73.74	21.4	0.2	intron	bbg -	chr3L_5_14500001	chr3L_14500001	0.40	RAL-340_100b
906	chr3L	14822773	14822933	mdg1	7437	11	33	160	'8-25	65.59	15.1	2.0	intron	CG17839 +	chr3L_33_14820001	chr3L_14820001	0.24	RAL-340_100b
907	chr3L	14878536	14878573	pogo	2077	56	4	37	'1-3	64.50	19.7	0.2	exon	CG17839 +	chr3L_4_14875001	chr3L_14875001	0.25	RAL-340_100b
908	chr3L	14879832	14880190	412	7487	7091	42	358	'34-8	65.37	10.1	3.8	intron	CG17839 +	chr3L_42_14875001	chr3L_14875001	0.81	RAL-340_100b
909	chr3L	14919422	14919737	mdg1	7443	7047	36	315	'1-35	60.80	16.8	2.0	intron	DCX-EMAP +	chr3L_36_14915001	chr3L_14915001	0.03	RAL-340_100b
910	chr3L	14951004	14951500	transib2	2408	61	10	496	'5-5	66.73	5.4	1.6	intergenic	not near genes	chr3L_10_14950001	chr3L_14950001	0.50	RAL-340_100b
911	chr3L	14972397	14972486	P-element	9	16	4	89	'3-1	52.55	15.0	0.2	intergenic	Brd +	chr3L_4_14970001	chr3L_14970001	0.75	RAL-340_100b
912	chr3L	14975227	14975350	Quasimodo	339	295	4	123	'3-1	74.02	17.4	0.2	5` UTR	Ocho +	chr3L_4_14975001	chr3L_14975001	0.75	RAL-340_100b
913	chr3L	14991878	14991993	jockey	4914	4863	38	115	'6-32	61.22	11.3	3.1	intergenic	mnd +,Zip71B +	chr3L_38_14990001	chr3L_14990001	0.16	RAL-340_100b
914	chr3L	15056266	15056682	BS	5039	5066	11	416	'3-8	70.47	11.5	0.9	intron	Sytbeta -	chr3L_11_15055001	chr3L_15055001	0.27	RAL-340_100b
915	chr3L	15074182	15074455	mdg1	7061	17	4	273	'1-3	62.80	13.2	0.3	intron	cp309 -	chr3L_4_15070001	chr3L_15070001	0.25	RAL-340_100b
916	chr3L	15093669	15093876	F-element	4482	4581	4	207	'3-1	65.23	21.5	0.2	intron,intron	cp309 -,CG6945 -	chr3L_4_15090001	chr3L_15090001	0.75	RAL-340_100b
917	chr3L	15099551	15099752	G4	3817	3833	16	201	'14-2	62.09	10.8	1.4	intron	CTPsyn +	chr3L_16_15095001	chr3L_15095001	0.88	RAL-340_100b
918	chr3L	15172746	15172775	INE-1	134	551	4	29	'3-1	65.80	25.0	0.2	intergenic	not near genes	chr3L_4_15170001	chr3L_15170001	0.75	RAL-340_100b
919	chr3L	15295722	15295773	gypsy5	250	321	8	51	'2-6	68.77	27.0	0.3	intergenic	not near genes	chr3L_8_15295001	chr3L_15295001	0.25	RAL-340_100b
920	chr3L	15442258	15442629	Juan	27	4192	38	371	'18-20	67.27	8.2	4.1	intergenic	not near genes	chr3L_38_15440001	chr3L_15440001	0.47	RAL-340_100b
921	chr3L	16090132	16090387	P-element	2829	32	6	255	'1-5	46.68	14.5	0.4	exon	CG5235 -	chr3L_6_16090001	chr3L_16090001	0.17	RAL-340_100b
922	chr3L	16120443	16120706	micropia	5314	5046	4	263	'2-2	62.53	19.2	0.2	3` UTR	Taf4 +	chr3L_4_16120001	chr3L_16120001	0.50	RAL-340_100b
923	chr3L	16236359	16236619	Juan	4026	4204	39	260	'17-22	62.89	9.8	3.6	3` UTR	l(3)72Dp +	chr3L_39_16235001	chr3L_16235001	0.44	RAL-340_100b
924	chr3L	16523184	16523224	jockey	8	256	11	40	'9-2	68.39	11.7	0.9	intron	CG43373 -	chr3L_11_16520001	chr3L_16520001	0.82	RAL-340_100b
925	chr3L	16661145	16661488	P-element	50	2884	64	343	'14-50	51.03	10.3	5.7	intron	Baldspot -	chr3L_64_16660001	chr3L_16660001	0.22	RAL-340_100b
926	chr3L	16747147	16747288	opus	5	7447	48	141	'16-32	66.67	9.4	4.6	intergenic	not near genes	chr3L_48_16745001	chr3L_16745001	0.33	RAL-340_100b
927	chr3L	16809654	16809866	mdg1	7079	7078	4	212	'2-2	78.33	17.0	0.2	intron	nudC +	chr3L_4_16805001	chr3L_16805001	0.50	RAL-340_100b
928	chr3L	17175970	17176205	accord	186	165	4	235	'1-3	67.91	33.6	0.1	intron	Rbp6 -	chr3L_4_17175001	chr3L_17175001	0.25	RAL-340_100b
929	chr3L	17243179	17243247	HB	381	431	5	68	'3-2	68.29	18.7	0.3	intergenic	CG7707 +	chr3L_5_17240001	chr3L_17240001	0.60	RAL-340_100b
930	chr3L	17244950	17245002	HB	1465	1617	4	52	'2-2	70.13	20.0	0.2	intergenic	CG7707 +	chr3L_4_17240001	chr3L_17240001	0.50	RAL-340_100b
931	chr3L	17341689	17342098	diver	6087	5943	38	409	'6-32	66.94	9.6	3.6	intergenic	brv2 -,CG13727 -	chr3L_38_17340001	chr3L_17340001	0.16	RAL-340_100b
932	chr3L	17347114	17347510	diver	25	197	98	396	'40-58	67.74	13.4	6.8	intron	Mip -	chr3L_98_17345001	chr3L_17345001	0.41	RAL-340_100b
933	chr3L	17354407	17354523	1360	155	111	4	116	'1-3	69.10	21.3	0.2	exon	CG7692 +	chr3L_4_17350001	chr3L_17350001	0.25	RAL-340_100b
934	chr3L	17503058	17503337	pogo	1981	118	28	279	'3-25	65.93	10.1	2.5	intron	Oatp74D +	chr3L_28_17500001	chr3L_17500001	0.11	RAL-340_100b
935	chr3L	17621646	17622045	P-element	2879	2872	55	399	'20-35	51.00	15.5	3.3	intergenic	CG6259 -,CG7510 +	chr3L_55_17620001	chr3L_17620001	0.36	RAL-340_100b
936	chr3L	17705268	17705520	Juan	159	4210	33	252	'24-9	66.01	8.4	3.5	intron	Ccn +	chr3L_33_17705001	chr3L_17705001	0.73	RAL-340_100b
937	chr3L	17860560	17860676	Chimpo	150	158	6	116	'2-4	72.03	13.7	0.4	intergenic	CG34002 +	chr3L_6_17860001	chr3L_17860001	0.33	RAL-340_100b
938	chr3L	17874034	17874117	1360	41	3231	4	83	'3-1	73.41	29.8	0.1	intergenic	not near genes	chr3L_4_17870001	chr3L_17870001	0.75	RAL-340_100b
939	chr3L	17904157	17904433	FB	2	1	59	276	'57-2	65.48	10.6	5.1	intron	Prestin -	chr3L_59_17900001	chr3L_17900001	0.97	RAL-340_100b
940	chr3L	17905507	17905753	Quasimodo	7343	15	22	246	'8-14	67.77	13.8	1.5	intron	Prestin -	chr3L_22_17905001	chr3L_17905001	0.36	RAL-340_100b
941	chr3L	18039484	18039896	roo	9047	8664	45	412	'22-23	67.92	7.4	5.4	intron	Eip75B -	chr3L_45_18035001	chr3L_18035001	0.49	RAL-340_100b
942	chr3L	18075294	18075619	pogo	181	2098	34	325	'6-28	66.82	10.9	2.9	intergenic	not near genes	chr3L_34_18075001	chr3L_18075001	0.18	RAL-340_100b
943	chr3L	18189464	18189565	S-element	64	1343	9	101	'7-2	68.58	18.9	0.5	intergenic	not near genes	chr3L_9_18185001	chr3L_18185001	0.78	RAL-340_100b
944	chr3L	18335104	18335146	1360	3351	3384	7	42	'3-4	60.94	6.5	0.9	intergenic	not near genes	chr3L_7_18335001	chr3L_18335001	0.43	RAL-340_100b
945	chr3L	18386632	18386729	Bari1	107	313	19	97	'11-8	68.78	7.3	2.3	intergenic	not near genes	chr3L_19_18385001	chr3L_18385001	0.58	RAL-340_100b
946	chr3L	18489575	18489975	Burdock	256	30	52	400	'28-24	63.77	12.7	3.8	intron	AstC-R2 -	chr3L_52_18485001	chr3L_18485001	0.54	RAL-340_100b
947	chr3L	18520132	18520284	BS	5017	5037	4	152	'1-3	73.29	13.6	0.3	intergenic	not near genes	chr3L_4_18520001	chr3L_18520001	0.25	RAL-340_100b
948	chr3L	18590597	18590681	Cr1a	4291	4294	12	84	'8-4	63.23	19.8	0.6	intergenic	CG7271 +	chr3L_12_18590001	chr3L_18590001	0.67	RAL-340_100b
949	chr3L	18596744	18596847	Doc	4270	4286	4	103	'3-1	80.65	17.6	0.2	5` UTR	CR45389 +	chr3L_4_18595001	chr3L_18595001	0.75	RAL-340_100b
950	chr3L	18834943	18835055	1360	3334	162	4	112	'2-2	76.42	24.9	0.2	intron	Indy -	chr3L_4_18830001	chr3L_18830001	0.50	RAL-340_100b
951	chr3L	18971500	18971950	BS	46	5078	47	450	'29-18	63.53	11.6	3.7	intergenic	not near genes	chr3L_47_18970001	chr3L_18970001	0.62	RAL-340_100b
952	chr3L	18971746	18971812	Tc1-2	479	479	4	66	'3-1	71.03	16.2	0.2	intergenic	not near genes	chr3L_4_18970001	chr3L_18970001	0.75	RAL-340_100b
953	chr3L	19083329	19083667	FB	24	8	51	338	'4-47	68.13	12.0	3.9	intron	Mkp3 -	chr3L_51_19080001	chr3L_19080001	0.08	RAL-340_100b
954	chr3L	19091600	19091708	297	341	6940	39	108	'1-38	67.27	21.7	1.7	intergenic	not near genes	chr3L_39_19090001	chr3L_19090001	0.03	RAL-340_100b
955	chr3L	19271018	19271058	INE-1	139	562	6	40	'4-2	60.30	87.0	0.1	intron	CG14085 +	chr3L_6_19270001	chr3L_19270001	0.67	RAL-340_100b
956	chr3L	19339320	19339529	Tc1	1642	77	33	209	'13-20	67.93	10.2	2.9	intergenic	not near genes	chr3L_33_19335001	chr3L_19335001	0.39	RAL-340_100b
957	chr3L	19424944	19425375	INE-1	164	537	4	431	'1-3	71.48	17.0	0.2	intergenic	not near genes	chr3L_4_19420001	chr3L_19420001	0.25	RAL-340_100b
958	chr3L	19467981	19468363	INE-1	150	551	7	382	'1-6	61.82	13.6	0.5	3` UTR	CG32214 +	chr3L_7_19465001	chr3L_19465001	0.14	RAL-340_100b
959	chr3L	19471279	19471357	Cr1a	4305	4351	6	78	'4-2	66.86	25.3	0.2	intergenic	825-Oak -	chr3L_6_19470001	chr3L_19470001	0.67	RAL-340_100b
960	chr3L	19471402	19471448	INE-1	86	106	9	46	'2-7	73.11	33.0	0.3	intergenic	825-Oak -	chr3L_9_19470001	chr3L_19470001	0.22	RAL-340_100b
961	chr3L	19590776	19590964	Idefix	342	7358	8	188	'6-2	71.98	17.2	0.4	3` UTR	ash1 -	chr3L_8_19590001	chr3L_19590001	0.75	RAL-340_100b
962	chr3L	19629126	19629225	INE-1	30	155	9	99	'1-8	73.82	27.4	0.3	intron	wnd -	chr3L_9_19625001	chr3L_19625001	0.11	RAL-340_100b
963	chr3L	19683615	19684151	INE-1	558	548	9	536	'3-6	71.80	13.8	0.6	intergenic	CG8765 -	chr3L_9_19680001	chr3L_19680001	0.33	RAL-340_100b
964	chr3L	19863914	19864039	Cr1a	4201	4147	8	125	'3-5	59.85	19.9	0.4	intergenic	not near genes	chr3L_8_19860001	chr3L_19860001	0.38	RAL-340_100b
965	chr3L	19951006	19951441	Ivk	24	5337	52	435	'28-24	64.85	9.4	5.0	intron,exon	Ac76E +,CG32219 -	chr3L_52_19950001	chr3L_19950001	0.54	RAL-340_100b
966	chr3L	20049512	20049697	jockey	4632	4906	50	185	'27-23	67.48	11.7	3.9	intergenic	not near genes	chr3L_50_20045001	chr3L_20045001	0.54	RAL-340_100b
967	chr3L	20078860	20078917	Quasimodo	195	7009	5	57	'4-1	67.23	25.0	0.2	intron	sNPF-R -	chr3L_5_20075001	chr3L_20075001	0.80	RAL-340_100b
968	chr3L	20181992	20182330	blood	7265	83	43	338	'35-8	67.27	10.7	3.7	intron	CG42674 -	chr3L_43_20180001	chr3L_20180001	0.81	RAL-340_100b
969	chr3L	20218186	20218367	mdg3	228	5294	5	181	'3-2	69.16	11.9	0.4	intergenic	CG6933 -	chr3L_5_20215001	chr3L_20215001	0.60	RAL-340_100b
970	chr3L	20258465	20258516	pogo	44	1922	5	51	'1-4	71.14	20.5	0.2	intron	rdgC +	chr3L_5_20255001	chr3L_20255001	0.20	RAL-340_100b
971	chr3L	20493298	20493536	mdg1	30	7067	6	238	'4-2	73.05	12.2	0.5	intron,intron	ZnT77C -,CG6020 +	chr3L_6_20490001	chr3L_20490001	0.67	RAL-340_100b
972	chr3L	20501477	20501514	INE-1	547	504	4	37	'1-3	74.22	27.7	0.1	intron,exon	CG32425 +,CG18281 +	chr3L_4_20500001	chr3L_20500001	0.25	RAL-340_100b
973	chr3L	20502345	20502462	INE-1	131	128	4	117	'3-1	68.57	15.0	0.2	intron	CG32425 +	chr3L_4_20500001	chr3L_20500001	0.75	RAL-340_100b
974	chr3L	21065449	21065806	jockey	36	4986	26	357	'23-3	67.48	15.5	1.6	intron	siz +	chr3L_26_21065001	chr3L_21065001	0.88	RAL-340_100b
975	chr3L	21145347	21145401	BS	5084	4979	7	54	'6-1	59.61	13.8	0.5	intron	Ac78C -	chr3L_7_21145001	chr3L_21145001	0.86	RAL-340_100b
976	chr3L	21145682	21145732	INE-1	552	565	23	50	'6-17	58.72	11.0	1.9	intron	Ac78C -	chr3L_23_21145001	chr3L_21145001	0.26	RAL-340_100b
977	chr3L	21240059	21240479	P-element	2876	48	65	420	'63-2	55.71	13.6	4.5	intron	Eip78C +	chr3L_65_21240001	chr3L_21240001	0.97	RAL-340_100b
978	chr3L	21362703	21362763	G2	2983	2889	5	60	'3-2	72.93	16.1	0.3	intergenic	not near genes	chr3L_5_21360001	chr3L_21360001	0.60	RAL-340_100b
979	chr3L	21401281	21401398	S-element	1705	1715	16	117	'5-11	67.38	11.4	1.3	intron	rgn +	chr3L_16_21400001	chr3L_21400001	0.31	RAL-340_100b
980	chr3L	21416510	21416811	roo	393	8795	53	301	'10-43	68.29	12.3	4.0	intron	rgn +	chr3L_53_21415001	chr3L_21415001	0.19	RAL-340_100b
981	chr3L	21441376	21441491	Tc1	420	328	6	115	'1-5	67.75	17.8	0.3	intergenic	CG5664 -	chr3L_6_21440001	chr3L_21440001	0.17	RAL-340_100b
982	chr3L	21442124	21442204	Tc1	227	8	4	80	'3-1	63.47	17.7	0.2	intergenic	CG5656 -	chr3L_4_21440001	chr3L_21440001	0.75	RAL-340_100b
983	chr3L	21484193	21484243	1360	26	405	9	50	'1-8	68.34	21.4	0.4	intergenic	not near genes	chr3L_9_21480001	chr3L_21480001	0.11	RAL-340_100b
984	chr3L	21485082	21485141	Cr1a	99	177	10	59	'8-2	68.62	14.1	0.7	intron	Neu2 -	chr3L_10_21485001	chr3L_21485001	0.80	RAL-340_100b
985	chr3L	21498494	21498825	Rt1b	95	5114	9	331	'2-7	72.66	11.8	0.7	5` UTR,intron	CR43933 +,Glg1 -	chr3L_9_21495001	chr3L_21495001	0.22	RAL-340_100b
986	chr3L	21756924	21756981	jockey	4942	4978	36	57	'15-21	62.16	23.0	1.5	intron	Syn1 -	chr3L_36_21755001	chr3L_21755001	0.42	RAL-340_100b
987	chr3L	21786966	21787236	INE-1	574	540	4	270	'3-1	62.64	12.8	0.3	intergenic	not near genes	chr3L_4_21785001	chr3L_21785001	0.75	RAL-340_100b
988	chr3L	21876248	21876428	Idefix	6929	7359	21	180	'5-16	66.10	5.9	3.0	intron	mub +	chr3L_21_21875001	chr3L_21875001	0.24	RAL-340_100b
989	chr3L	21880354	21880893	P-element	4	2852	49	539	'3-46	43.76	12.6	3.6	intron	mub +	chr3L_49_21880001	chr3L_21880001	0.06	RAL-340_100b
990	chr3L	21881463	21881571	invader2	5054	4881	9	108	'7-2	72.57	18.0	0.5	intron	mub +	chr3L_9_21880001	chr3L_21880001	0.78	RAL-340_100b
991	chr3L	21952324	21952479	hopper2	7	3	6	155	'4-2	71.99	12.2	0.5	intergenic	not near genes	chr3L_6_21950001	chr3L_21950001	0.67	RAL-340_100b
992	chr3L	21952925	21953169	hopper2	134	435	4	244	'1-3	75.44	11.8	0.3	intergenic	not near genes	chr3L_4_21950001	chr3L_21950001	0.25	RAL-340_100b
993	chr3L	21966589	21966799	INE-1	29	171	6	210	'3-3	66.26	15.4	0.4	intron	CS-2 +	chr3L_6_21965001	chr3L_21965001	0.50	RAL-340_100b
994	chr3L	22016610	22016996	INE-1	84	572	5	386	'1-4	61.57	12.1	0.4	intergenic	not near genes	chr3L_5_22015001	chr3L_22015001	0.20	RAL-340_100b
995	chr3L	22017435	22017610	INE-1	28	13	4	175	'2-2	71.06	20.0	0.2	intergenic	not near genes	chr3L_4_22015001	chr3L_22015001	0.50	RAL-340_100b
996	chr3L	22071967	22072323	INE-1	570	536	4	356	'2-2	71.41	11.6	0.3	intergenic	CG7139 -,CR43995 +	chr3L_4_22070001	chr3L_22070001	0.50	RAL-340_100b
997	chr3L	22242862	22243058	blood	148	165	5	196	'1-4	68.69	48.1	0.1	3` UTR	olf413 +	chr3L_5_22240001	chr3L_22240001	0.20	RAL-340_100b
998	chr3L	22251792	22251941	F-element	4403	4431	4	149	'1-3	67.11	23.8	0.2	intergenic	not near genes	chr3L_4_22250001	chr3L_22250001	0.25	RAL-340_100b
999	chr3L	22268891	22269006	F-element	4309	4486	4	115	'2-2	66.90	21.4	0.2	intron	Csp +	chr3L_4_22265001	chr3L_22265001	0.50	RAL-340_100b
1000	chr3L	22399600	22399909	FB	45	93	79	309	'7-72	66.34	11.6	6.3	intron	Ten-m -	chr3L_79_22395001	chr3L_22395001	0.09	RAL-340_100b
1001	chr3L	22495531	22495796	hobo	7	2921	42	265	'39-3	66.21	25.3	1.6	intergenic	not near genes	chr3L_42_22495001	chr3L_22495001	0.93	RAL-340_100b
1002	chr3L	22511615	22511813	INE-1	403	43	14	198	'3-11	69.97	15.3	0.9	intergenic	not near genes	chr3L_14_22510001	chr3L_22510001	0.21	RAL-340_100b
1003	chr3L	22512307	22512476	INE-1	531	537	5	169	'2-3	77.16	21.4	0.2	intergenic	not near genes	chr3L_5_22510001	chr3L_22510001	0.40	RAL-340_100b
1004	chr3L	22532074	22532236	297	29	6682	4	162	'3-1	70.34	8.0	0.4	intergenic	not near genes	chr3L_4_22530001	chr3L_22530001	0.75	RAL-340_100b
1005	chr3L	22532122	22532280	Cr1a	4120	4223	8	158	'6-2	69.08	10.2	0.7	intergenic	not near genes	chr3L_8_22530001	chr3L_22530001	0.75	RAL-340_100b
1006	chr3L	22572206	22572566	roo	8966	8679	52	360	'39-13	69.27	10.3	4.6	intergenic	not near genes	chr3L_52_22570001	chr3L_22570001	0.75	RAL-340_100b
1007	chr3L	22639540	22639906	INE-1	551	579	5	366	'4-1	71.73	28.5	0.2	intergenic	not near genes	chr3L_5_22635001	chr3L_22635001	0.80	RAL-340_100b
1008	chr3L	22641183	22641222	G4	3663	3665	5	39	'3-2	78.48	20.3	0.2	intergenic	not near genes	chr3L_5_22640001	chr3L_22640001	0.60	RAL-340_100b
1009	chr3L	22641857	22641947	G4	3397	3451	12	90	'4-8	68.23	23.4	0.5	intergenic	not near genes	chr3L_12_22640001	chr3L_22640001	0.33	RAL-340_100b
1010	chr3L	22681102	22681181	jockey	4676	4937	27	79	'19-8	67.07	16.9	1.5	intergenic	not near genes	chr3L_27_22680001	chr3L_22680001	0.70	RAL-340_100b
1011	chr3L	22721100	22721200	1360	3334	42	7	100	'3-4	76.43	24.2	0.3	intergenic	CG14451 -	chr3L_7_22720001	chr3L_22720001	0.43	RAL-340_100b
1012	chr3L	22738874	22738964	I-element	5114	5069	4	90	'1-3	73.84	25.3	0.2	3` UTR,intron	l(3)04053 -,CR45163 +	chr3L_4_22735001	chr3L_22735001	0.25	RAL-340_100b
1013	chr3L	22743340	22743539	FB	48	267	7	199	'5-2	63.91	39.5	0.2	intron	CG7369 +	chr3L_7_22740001	chr3L_22740001	0.71	RAL-340_100b
1014	chr3L	22744661	22744794	FB	619	938	10	133	'6-4	64.78	23.2	0.4	intron	CG7369 +	chr3L_10_22740001	chr3L_22740001	0.60	RAL-340_100b
1015	chr3L	22751085	22751182	FB	394	468	9	97	'3-6	66.79	20.2	0.4	intron	SPoCk +	chr3L_9_22750001	chr3L_22750001	0.33	RAL-340_100b
1016	chr3L	22848534	22848580	INE-1	541	580	16	46	'10-6	74.18	24.9	0.6	intergenic	not near genes	chr3L_16_22845001	chr3L_22845001	0.62	RAL-340_100b
1017	chr3L	22907999	22908067	I-element	5005	355	7	68	'2-5	60.87	32.3	0.2	intergenic	not near genes	chr3L_7_22905001	chr3L_22905001	0.29	RAL-340_100b
1018	chr3L	22908066	22908282	INE-1	256	559	19	216	'18-1	63.29	27.2	0.7	intergenic	not near genes	chr3L_19_22905001	chr3L_22905001	0.95	RAL-340_100b
1019	chr3L	22908066	22908310	Porto1	423	169	16	244	'15-1	64.48	26.7	0.6	intergenic	not near genes	chr3L_16_22905001	chr3L_22905001	0.94	RAL-340_100b
1020	chr3L	22960477	22960593	1360	3346	3252	5	116	'3-2	70.02	13.4	0.3	intergenic	CR45758 +	chr3L_5_22960001	chr3L_22960001	0.60	RAL-340_100b
1021	chr3L	22975979	22976074	INE-1	300	253	4	95	'1-3	68.81	28.5	0.1	intergenic	not near genes	chr3L_4_22975001	chr3L_22975001	0.25	RAL-340_100b
1022	chr3L	23039720	23039772	G5A	2627	2717	4	52	'1-3	68.64	27.2	0.1	3` UTR	nrm +	chr3L_4_23035001	chr3L_23035001	0.25	RAL-340_100b
1023	chr3L	23041228	23041347	INE-1	93	40	4	119	'1-3	75.28	20.4	0.2	intergenic	not near genes	chr3L_4_23040001	chr3L_23040001	0.25	RAL-340_100b
1024	chr3L	23070732	23070879	mariner2	47	182	5	147	'1-4	73.12	11.4	0.4	intergenic	not near genes	chr3L_5_23070001	chr3L_23070001	0.20	RAL-340_100b
1025	chr3L	23071846	23071904	mariner2	624	713	5	58	'1-4	66.72	15.6	0.3	intergenic	not near genes	chr3L_5_23070001	chr3L_23070001	0.20	RAL-340_100b
1026	chr3L	23072105	23072261	17.6	445	7141	5	156	'2-3	58.89	14.9	0.3	intergenic	not near genes	chr3L_5_23070001	chr3L_23070001	0.40	RAL-340_100b
1027	chr3L	23079639	23079777	17.6	152	66	7	138	'4-3	69.66	14.4	0.5	intergenic	not near genes	chr3L_7_23075001	chr3L_23075001	0.57	RAL-340_100b
1028	chr3L	23089099	23089292	1360	3336	26	4	193	'2-2	69.14	13.5	0.3	intergenic	not near genes	chr3L_4_23085001	chr3L_23085001	0.50	RAL-340_100b
1029	chr3L	23090530	23090684	1360	3371	51	9	154	'7-2	64.45	21.9	0.4	intergenic	not near genes	chr3L_9_23090001	chr3L_23090001	0.78	RAL-340_100b
1030	chr3L	23097354	23097499	S2	1536	1658	20	145	'8-12	71.85	23.7	0.8	5` UTR	CkIIalpha +	chr3L_20_23095001	chr3L_23095001	0.40	RAL-340_100b
1031	chr3L	23099454	23099625	S-element	109	1698	6	171	'5-1	69.22	11.5	0.5	intron	CkIIalpha +	chr3L_6_23095001	chr3L_23095001	0.83	RAL-340_100b
1032	chr3L	23105974	23106034	G4	3765	3663	4	60	'3-1	75.09	15.4	0.2	intergenic	not near genes	chr3L_4_23105001	chr3L_23105001	0.75	RAL-340_100b
1033	chr3L	23124842	23124871	HB	1434	1374	4	29	'1-3	69.76	16.9	0.2	intergenic	not near genes	chr3L_4_23120001	chr3L_23120001	0.25	RAL-340_100b
1034	chr3L	23143327	23143528	S-element	1673	32	9	201	'7-2	70.98	6.2	1.2	intergenic	not near genes	chr3L_9_23140001	chr3L_23140001	0.78	RAL-340_100b
1035	chr3L	23146286	23146522	1360	30	25	47	236	'1-46	65.88	14.7	3.0	intergenic	not near genes	chr3L_47_23145001	chr3L_23145001	0.02	RAL-340_100b
1036	chr3L	23146395	23146522	hopper	1364	1407	4	127	'1-3	71.03	16.9	0.2	intergenic	not near genes	chr3L_4_23145001	chr3L_23145001	0.25	RAL-340_100b
1037	chr3L	23150665	23150727	Gypsy6A_LTR	304	233	14	62	'7-7	69.18	14.8	0.9	5` UTR	CR45164 +	chr3L_14_23150001	chr3L_23150001	0.50	RAL-340_100b
1038	chr3L	23155464	23155564	Gypsy6A_LTR	154	36	10	100	'5-5	73.79	29.8	0.3	intergenic	not near genes	chr3L_10_23155001	chr3L_23155001	0.50	RAL-340_100b
1039	chr3L	23181679	23181809	1360	3207	3282	14	130	'13-1	68.78	24.7	0.5	intron	CG34031 +	chr3L_14_23180001	chr3L_23180001	0.93	RAL-340_100b
1040	chr3L	23198343	23198509	invader1	314	94	13	166	'1-12	72.73	15.0	0.8	intergenic	not near genes	chr3L_13_23195001	chr3L_23195001	0.08	RAL-340_100b
1041	chr3L	23210521	23210744	INE-1	531	499	4	223	'2-2	66.39	11.3	0.3	intron	nAChRalpha4 +	chr3L_4_23210001	chr3L_23210001	0.50	RAL-340_100b
1042	chr3L	23211218	23211325	Helena	1234	1202	6	107	'3-3	66.67	10.6	0.5	intron	nAChRalpha4 +	chr3L_6_23210001	chr3L_23210001	0.50	RAL-340_100b
1043	chr3L	23234975	23235118	S2	1521	31	5	143	'2-3	66.24	17.0	0.3	intron	nAChRalpha4 +	chr3L_5_23230001	chr3L_23230001	0.40	RAL-340_100b
1044	chr3L	23235996	23236183	HMS-Beagle2	226	6893	5	187	'1-4	73.76	20.3	0.2	intron	nAChRalpha4 +	chr3L_5_23235001	chr3L_23235001	0.20	RAL-340_100b
1045	chr3L	23271286	23271714	Transib-N1_DM	421	393	5	428	'4-1	71.11	8.2	0.5	intron	nAChRalpha4 +	chr3L_5_23270001	chr3L_23270001	0.80	RAL-340_100b
1046	chr3L	23276908	23277011	invader2	5042	238	4	103	'1-3	73.09	12.4	0.3	intron	nAChRalpha4 +	chr3L_4_23275001	chr3L_23275001	0.25	RAL-340_100b
1047	chr3L	23282744	23282873	looper1	1638	1617	5	129	'3-2	74.13	15.8	0.3	intron	nAChRalpha4 +	chr3L_5_23280001	chr3L_23280001	0.60	RAL-340_100b
1048	chr3L	23288879	23289103	INE-1	570	552	7	224	'1-6	66.94	26.4	0.3	intergenic	not near genes	chr3L_7_23285001	chr3L_23285001	0.14	RAL-340_100b
1049	chr3L	23295879	23295989	BS3	1678	1619	19	110	'13-6	68.22	31.9	0.6	intergenic	not near genes	chr3L_19_23295001	chr3L_23295001	0.68	RAL-340_100b
1050	chr3L	23317383	23317493	1360	3332	107	5	110	'1-4	75.85	23.5	0.2	intergenic	not near genes	chr3L_5_23315001	chr3L_23315001	0.20	RAL-340_100b
1051	chr3L	23354606	23354650	gypsy2	6493	6537	14	44	'4-10	64.71	11.0	1.2	intergenic	not near genes	chr3L_14_23350001	chr3L_23350001	0.29	RAL-340_100b
1052	chr3L	23433894	23434007	Porto1	4376	4480	6	113	'3-3	69.55	13.7	0.4	intergenic	not near genes	chr3L_6_23430001	chr3L_23430001	0.50	RAL-340_100b
1053	chr3L	23512227	23512333	G4	213	166	5	106	'2-3	73.08	13.6	0.3	intergenic	not near genes	chr3L_5_23510001	chr3L_23510001	0.40	RAL-340_100b
1054	chr3L	23568118	23568555	INE-1	246	552	9	437	'4-5	62.92	14.3	0.6	intron	AGO3 +	chr3L_9_23565001	chr3L_23565001	0.44	RAL-340_100b
1055	chr3L	23568393	23568603	1360	3103	3112	18	210	'4-14	64.30	19.8	0.9	intron	AGO3 +	chr3L_18_23565001	chr3L_23565001	0.22	RAL-340_100b
1056	chr3L	23580649	23580806	S-element	1669	7	4	157	'3-1	68.92	15.0	0.2	intron	AGO3 +	chr3L_4_23580001	chr3L_23580001	0.75	RAL-340_100b
1057	chr3L	23589357	23589434	1360	197	3360	7	77	'6-1	65.24	19.4	0.3	intron	AGO3 +	chr3L_7_23585001	chr3L_23585001	0.86	RAL-340_100b
1058	chr3L	23591877	23592131	1360	82	3162	11	254	'9-2	65.44	13.4	0.8	intron	AGO3 +	chr3L_11_23590001	chr3L_23590001	0.82	RAL-340_100b
1059	chr3L	23599727	23599804	invader4	340	210	4	77	'1-3	70.03	15.4	0.2	intron	AGO3 +	chr3L_4_23595001	chr3L_23595001	0.25	RAL-340_100b
1060	chr3L	23610753	23610980	G5A	2390	2738	4	227	'1-3	67.50	15.8	0.2	intron	AGO3 +	chr3L_4_23610001	chr3L_23610001	0.25	RAL-340_100b
1061	chr3L	23617936	23618512	INE-1	130	246	4	576	'2-2	63.86	10.1	0.4	intron	AGO3 +	chr3L_4_23615001	chr3L_23615001	0.50	RAL-340_100b
1062	chr3L	23620609	23620641	Doc	175	218	9	32	'2-7	66.53	25.8	0.3	intron	AGO3 +	chr3L_9_23620001	chr3L_23620001	0.22	RAL-340_100b
1063	chr3L	23648712	23648808	INE-1	540	551	4	96	'2-2	77.25	21.2	0.2	intron	AGO3 +	chr3L_4_23645001	chr3L_23645001	0.50	RAL-340_100b
1064	chr3L	23650273	23650363	1360	198	3334	8	90	'5-3	76.35	18.4	0.4	intron	AGO3 +	chr3L_8_23650001	chr3L_23650001	0.62	RAL-340_100b
1065	chr3L	23655918	23656151	roo	9061	391	6	233	'3-3	69.40	6.3	0.8	intron	AGO3 +	chr3L_6_23655001	chr3L_23655001	0.50	RAL-340_100b
1066	chr3L	23663019	23663118	Porto1	4556	4365	4	99	'3-1	69.28	16.1	0.2	intron	AGO3 +	chr3L_4_23660001	chr3L_23660001	0.75	RAL-340_100b
1067	chr3L	23678118	23678154	Osvaldo	33	18	9	36	'5-4	70.83	20.0	0.4	intron	AGO3 +	chr3L_9_23675001	chr3L_23675001	0.56	RAL-340_100b
1068	chr3L	23687816	23687891	transib3	2644	2840	6	75	'3-3	71.55	23.9	0.2	intron	AGO3 +	chr3L_6_23685001	chr3L_23685001	0.50	RAL-340_100b
1069	chr3L	23697982	23698091	1360	3320	3361	6	109	'4-2	65.99	11.1	0.5	intergenic	not near genes	chr3L_6_23695001	chr3L_23695001	0.67	RAL-340_100b
1070	chr3L	23702889	23703237	INE-1	145	85	11	348	'8-3	77.78	14.7	0.7	intergenic	not near genes	chr3L_11_23700001	chr3L_23700001	0.73	RAL-340_100b
1071	chr3L	23739181	23739258	INE-1	89	84	4	77	'2-2	62.59	19.8	0.2	intron	CG17698 +	chr3L_4_23735001	chr3L_23735001	0.50	RAL-340_100b
1072	chr3L	23746964	23747152	INE-1	81	546	13	188	'7-6	69.79	18.3	0.7	intron	CG17698 +	chr3L_13_23745001	chr3L_23745001	0.54	RAL-340_100b
1073	chr3L	23758693	23758815	transib3	101	48	4	122	'2-2	74.88	21.7	0.2	intergenic	not near genes	chr3L_4_23755001	chr3L_23755001	0.50	RAL-340_100b
1074	chr3L	23784186	23784273	Transib5	93	27	4	87	'3-1	69.82	11.8	0.3	intergenic	CG43968 +	chr3L_4_23780001	chr3L_23780001	0.75	RAL-340_100b
1075	chr3L	23839696	23839911	McClintock	5993	5960	14	215	'13-1	63.12	7.3	1.7	intergenic	CG40470 -	chr3L_14_23835001	chr3L_23835001	0.93	RAL-340_100b
1076	chr3L	23840236	23840512	HMS-Beagle2	7139	6	44	276	'2-42	67.63	12.6	3.2	intron	CG40470 -	chr3L_44_23840001	chr3L_23840001	0.05	RAL-340_100b
1077	chr3L	23840663	23840741	1360	3139	3174	10	78	'2-8	66.47	28.1	0.3	intron	CG40470 -	chr3L_10_23840001	chr3L_23840001	0.20	RAL-340_100b
1078	chr3L	23849747	23849833	R1A1-element	5334	5295	5	86	'2-3	66.26	18.2	0.3	intron	CG40470 -	chr3L_5_23845001	chr3L_23845001	0.40	RAL-340_100b
1079	chr3L	23871299	23871437	Doc	50	41	18	138	'9-9	66.99	10.1	1.6	intron	CG40470 -	chr3L_18_23870001	chr3L_23870001	0.50	RAL-340_100b
1080	chr3L	23890023	23890210	1360	3388	3161	7	187	'1-6	61.44	10.1	0.6	intron	CG40470 -	chr3L_7_23890001	chr3L_23890001	0.14	RAL-340_100b
1081	chr3L	23891133	23891311	1360	305	301	9	178	'4-5	73.11	12.2	0.7	intron	CG40470 -	chr3L_9_23890001	chr3L_23890001	0.44	RAL-340_100b
1082	chr3L	23907401	23907652	1360	18	44	4	251	'2-2	70.22	18.9	0.2	intron	CG40470 -	chr3L_4_23905001	chr3L_23905001	0.50	RAL-340_100b
1083	chr3L	23909050	23909168	I-element	4910	5009	8	118	'6-2	71.58	11.3	0.7	intron	CG40470 -	chr3L_8_23905001	chr3L_23905001	0.75	RAL-340_100b
1084	chr3L	23933399	23933630	Cr1a	182	323	7	231	'5-2	62.88	13.3	0.5	intron	CG40470 -	chr3L_7_23930001	chr3L_23930001	0.71	RAL-340_100b
1085	chr3L	23937197	23937355	Doc3-element	120	341	8	158	'5-3	70.16	14.7	0.5	intron	CG40470 -	chr3L_8_23935001	chr3L_23935001	0.62	RAL-340_100b
1086	chr3L	23947893	23948389	INE-1	174	536	11	496	'7-4	65.72	20.7	0.5	intron	CG40470 -	chr3L_11_23945001	chr3L_23945001	0.64	RAL-340_100b
1087	chr3L	23974481	23974895	INE-1	564	536	4	414	'3-1	68.72	11.4	0.3	intron	CG40470 -	chr3L_4_23970001	chr3L_23970001	0.75	RAL-340_100b
1088	chr3L	23979541	23979727	F-element	91	252	7	186	'3-4	69.37	13.5	0.5	intron	CG40470 -	chr3L_7_23975001	chr3L_23975001	0.43	RAL-340_100b
1089	chr3L	24007869	24008078	Burdock	30	6153	22	209	'21-1	67.33	12.2	1.7	intergenic	not near genes	chr3L_22_24005001	chr3L_24005001	0.95	RAL-340_100b
1090	chr3L	24021081	24021306	1360	17	222	5	225	'4-1	65.05	18.6	0.3	intergenic	not near genes	chr3L_5_24020001	chr3L_24020001	0.80	RAL-340_100b
1091	chr3L	24022445	24022641	1360	43	3345	10	196	'9-1	63.68	20.7	0.5	intergenic	not near genes	chr3L_10_24020001	chr3L_24020001	0.90	RAL-340_100b
1092	chr3L	24031694	24031805	Tc1	1601	1559	9	111	'3-6	72.09	19.0	0.5	intron	CG40045 +	chr3L_9_24030001	chr3L_24030001	0.33	RAL-340_100b
1093	chr3L	24034560	24034719	1360	3342	16	6	159	'3-3	73.54	18.7	0.3	intron	CG40045 +	chr3L_6_24030001	chr3L_24030001	0.50	RAL-340_100b
1094	chr3L	24075197	24075580	INE-1	553	573	9	383	'7-2	66.78	11.3	0.7	intron	Snap25 +	chr3L_9_24075001	chr3L_24075001	0.78	RAL-340_100b
1095	chr3L	24087878	24088476	Tc3	411	1324	14	598	'3-11	75.10	13.3	1.0	intron	Snap25 +	chr3L_14_24085001	chr3L_24085001	0.21	RAL-340_100b
1096	chr3L	24088531	24088917	Tc3	1425	1384	5	386	'3-2	65.36	8.4	0.5	intron	Snap25 +	chr3L_5_24085001	chr3L_24085001	0.60	RAL-340_100b
1097	chr3L	24161500	24161710	1360	3003	3309	6	210	'3-3	72.35	11.2	0.5	intron	Snap25 +	chr3L_6_24160001	chr3L_24160001	0.50	RAL-340_100b
1098	chr3L	24163311	24163499	R1A1-element	5316	4860	5	188	'1-4	66.81	11.9	0.4	intron	Snap25 +	chr3L_5_24160001	chr3L_24160001	0.20	RAL-340_100b
1099	chr3L	24191650	24191822	Cr1a	4322	4021	5	172	'2-3	70.16	18.9	0.3	intron	Snap25 +	chr3L_5_24190001	chr3L_24190001	0.40	RAL-340_100b
1100	chr3L	24206527	24206670	INE-1	13	10	5	143	'3-2	70.65	18.6	0.3	intron	Snap25 +	chr3L_5_24205001	chr3L_24205001	0.60	RAL-340_100b
1101	chr3L	24233219	24233329	G4	3548	3495	15	110	'12-3	68.42	12.3	1.1	intron	Snap25 +	chr3L_15_24230001	chr3L_24230001	0.80	RAL-340_100b
1102	chr3L	24239218	24239359	Idefix	119	51	8	141	'5-3	69.47	14.1	0.5	intron	Snap25 +	chr3L_8_24235001	chr3L_24235001	0.62	RAL-340_100b
1103	chr3L	24264804	24264852	gypsy11	71	4040	8	48	'6-2	65.40	26.5	0.3	intron	Snap25 +	chr3L_8_24260001	chr3L_24260001	0.75	RAL-340_100b
1104	chr3L	24282041	24282175	transib1	82	6	4	134	'1-3	69.97	9.0	0.4	intron	Snap25 +	chr3L_4_24280001	chr3L_24280001	0.25	RAL-340_100b
1105	chr3L	24300080	24300280	gypsy8	330	314	4	200	'3-1	69.50	9.3	0.4	intergenic	not near genes	chr3L_4_24300001	chr3L_24300001	0.75	RAL-340_100b
1106	chr3L	24300789	24300895	INE-1	549	258	7	106	'5-2	69.72	19.7	0.3	intergenic	not near genes	chr3L_7_24300001	chr3L_24300001	0.71	RAL-340_100b
1107	chr3L	24302232	24302270	looper1	242	234	4	38	'1-3	70.93	18.0	0.2	intergenic	not near genes	chr3L_4_24300001	chr3L_24300001	0.25	RAL-340_100b
1108	chr3L	24325354	24325429	S-element	1605	1508	5	75	'2-3	76.20	13.9	0.3	intron	nvd +	chr3L_5_24325001	chr3L_24325001	0.40	RAL-340_100b
1109	chr3L	24335641	24335861	Cr1a	2	33	9	220	'7-2	68.55	7.9	1.0	intron	nvd +	chr3L_9_24335001	chr3L_24335001	0.78	RAL-340_100b
1110	chr3L	24352483	24352574	rooA	175	198	5	91	'1-4	71.29	14.4	0.3	intron	nvd +	chr3L_5_24350001	chr3L_24350001	0.20	RAL-340_100b
1111	chr3L	24362373	24362555	Quasimodo	7134	7314	6	182	'2-4	67.83	9.7	0.6	intron	nvd +	chr3L_6_24360001	chr3L_24360001	0.33	RAL-340_100b
1112	chr3L	24375507	24375643	Cr1a	4357	4165	5	136	'3-2	74.37	13.6	0.3	intron	nvd +	chr3L_5_24375001	chr3L_24375001	0.60	RAL-340_100b
1113	chr3L	24393325	24393414	mdg3	5319	43	5	89	'4-1	73.48	13.9	0.3	intron	nvd +	chr3L_5_24390001	chr3L_24390001	0.80	RAL-340_100b
1114	chr3L	24409013	24409078	Quasimodo	38	116	4	65	'3-1	66.23	22.0	0.2	intergenic	not near genes	chr3L_4_24405001	chr3L_24405001	0.75	RAL-340_100b
1115	chr3L	24492458	24492829	297	270	6616	7	371	'6-1	73.48	13.1	0.5	intergenic	not near genes	chr3L_7_24490001	chr3L_24490001	0.86	RAL-340_100b
1116	chr3L	24505303	24505470	X-element	4711	4559	5	167	'1-4	72.68	15.6	0.3	intergenic	not near genes	chr3L_5_24505001	chr3L_24505001	0.20	RAL-340_100b
1117	chr3L	24516474	24516595	Doc3-element	4719	4631	15	121	'14-1	72.40	17.9	0.8	intergenic	not near genes	chr3L_15_24515001	chr3L_24515001	0.93	RAL-340_100b
1118	chr3L	24518408	24518536	Doc3-element	4701	4670	7	128	'2-5	62.59	14.4	0.5	intergenic	not near genes	chr3L_7_24515001	chr3L_24515001	0.29	RAL-340_100b
1119	chr3L	24537911	24538188	INE-1	126	501	5	277	'2-3	70.87	13.2	0.4	intron	mRpS5 +	chr3L_5_24535001	chr3L_24535001	0.40	RAL-340_100b
1120	chr3L	24538197	24538232	1360	3386	9	4	35	'2-2	74.75	34.5	0.1	intron	mRpS5 +	chr3L_4_24535001	chr3L_24535001	0.50	RAL-340_100b
1121	chr3L	24737435	24737589	transib1	111	221	4	154	'2-2	68.60	7.2	0.5	intron	scro +	chr3L_4_24735001	chr3L_24735001	0.50	RAL-340_100b
1122	chr3L	24739460	24739611	transib1	2003	2043	4	151	'2-2	66.81	10.2	0.4	intron	scro +	chr3L_4_24735001	chr3L_24735001	0.50	RAL-340_100b
1123	chr3L	24741456	24741504	Cr1a	4015	3983	4	48	'2-2	58.48	15.2	0.2	intron	scro +	chr3L_4_24740001	chr3L_24740001	0.50	RAL-340_100b
1124	chr3L	24763494	24763539	FB	769	703	9	45	'8-1	70.51	29.1	0.3	intron	scro +	chr3L_9_24760001	chr3L_24760001	0.89	RAL-340_100b
1125	chr3L	24764625	24764799	1360	28	47	5	174	'1-4	74.54	12.7	0.4	intron	scro +	chr3L_5_24760001	chr3L_24760001	0.20	RAL-340_100b
1126	chr3L	24766014	24766209	1360	3185	1	5	195	'3-2	71.99	16.0	0.3	intron	scro +	chr3L_5_24765001	chr3L_24765001	0.60	RAL-340_100b
1127	chr3L	24938069	24938166	Helena	891	947	5	97	'1-4	70.51	17.8	0.3	intergenic	not near genes	chr3L_5_24935001	chr3L_24935001	0.20	RAL-340_100b
1128	chr3L	25078413	25078508	1360	245	89	8	95	'4-4	60.80	26.4	0.3	intergenic	not near genes	chr3L_8_25075001	chr3L_25075001	0.50	RAL-340_100b
1129	chr3L	25114020	25114284	INE-1	547	577	5	264	'2-3	72.71	17.1	0.3	intron	Set1 +	chr3L_5_25110001	chr3L_25110001	0.40	RAL-340_100b
1130	chr3L	25162552	25162667	1360	3388	499	8	115	'5-3	63.26	16.2	0.5	intergenic	not near genes	chr3L_8_25160001	chr3L_25160001	0.62	RAL-340_100b
1131	chr3L	25186280	25186342	Max-element	430	473	13	62	'9-4	75.47	11.5	1.0	intergenic	not near genes	chr3L_13_25185001	chr3L_25185001	0.69	RAL-340_100b
1132	chr3L	25192141	25192261	Cr1a	4337	4294	7	120	'6-1	69.33	18.3	0.4	intergenic	not near genes	chr3L_7_25190001	chr3L_25190001	0.86	RAL-340_100b
1133	chr3L	25208004	25208136	TLD2_LTR	55	157	4	132	'2-2	65.52	11.5	0.3	intergenic	not near genes	chr3L_4_25205001	chr3L_25205001	0.50	RAL-340_100b
1134	chr3L	25268116	25268163	F-element	24	11	26	47	'14-12	61.27	12.9	1.9	intron	CG40467 -	chr3L_26_25265001	chr3L_25265001	0.54	RAL-340_100b
1135	chr3L	25271052	25271263	1360	4	52	4	211	'3-1	70.98	12.8	0.3	intron	CG40467 -	chr3L_4_25270001	chr3L_25270001	0.75	RAL-340_100b
1136	chr3L	25272458	25272577	1360	199	86	28	119	'1-27	67.82	7.3	3.4	intron	CG40467 -	chr3L_28_25270001	chr3L_25270001	0.04	RAL-340_100b
1137	chr3L	25331056	25331208	F-element	277	175	9	152	'3-6	67.85	18.7	0.5	intergenic	not near genes	chr3L_9_25330001	chr3L_25330001	0.33	RAL-340_100b
1138	chr3L	25346669	25346741	baggins	132	25	4	72	'2-2	68.59	17.3	0.2	intergenic	not near genes	chr3L_4_25345001	chr3L_25345001	0.50	RAL-340_100b
1139	chr3L	25442467	25442524	Chimpo	146	29	7	57	'1-6	58.50	12.2	0.5	intergenic	not near genes	chr3L_7_25440001	chr3L_25440001	0.14	RAL-340_100b
1140	chr3L	25671383	25671458	Cr1a	4206	4149	5	75	'1-4	68.35	16.7	0.3	intergenic	CG41343 -	chr3L_5_25670001	chr3L_25670001	0.20	RAL-340_100b
1141	chr3L	25725428	25725485	TLD2_LTR	142	104	5	57	'3-2	67.56	14.8	0.3	intergenic	not near genes	chr3L_5_25725001	chr3L_25725001	0.60	RAL-340_100b
1142	chr3L	25874411	25874521	1360	141	59	7	110	'2-5	72.02	20.3	0.3	intron	CG40178 -	chr3L_7_25870001	chr3L_25870001	0.29	RAL-340_100b
1143	chr3L	25876127	25876248	1360	3272	3315	7	121	'6-1	71.98	17.2	0.4	intron	CG40178 -	chr3L_7_25875001	chr3L_25875001	0.86	RAL-340_100b
1144	chr3L	25911631	25911986	looper1	1455	1654	8	355	'3-5	69.89	8.9	0.8	intron	CG40178 -	chr3L_8_25910001	chr3L_25910001	0.38	RAL-340_100b
1145	chr3L	25926187	25926374	1360	64	3354	6	187	'2-4	75.61	20.1	0.3	intron	CG40178 -	chr3L_6_25925001	chr3L_25925001	0.33	RAL-340_100b
1146	chr3L	25985492	25985539	Helena	1245	1246	5	47	'2-3	65.34	32.0	0.2	intron	CG40178 -	chr3L_5_25985001	chr3L_25985001	0.40	RAL-340_100b
1147	chr3L	25995890	25995957	Stalker4	234	37	5	67	'2-3	68.59	21.8	0.2	intron	CG40178 -	chr3L_5_25995001	chr3L_25995001	0.40	RAL-340_100b
1148	chr3L	26029452	26029517	G3	203	204	4	65	'3-1	76.46	7.5	0.5	intergenic	not near genes	chr3L_4_26025001	chr3L_26025001	0.75	RAL-340_100b
1149	chr3L	26229855	26229894	HB	139	417	8	39	'5-3	71.98	27.1	0.3	intergenic	not near genes	chr3L_8_26225001	chr3L_26225001	0.62	RAL-340_100b
1150	chr3L	26230997	26231122	HB	1605	1534	6	125	'1-5	63.79	15.4	0.4	intergenic	not near genes	chr3L_6_26230001	chr3L_26230001	0.17	RAL-340_100b
1151	chr3L	26356538	26356753	Cr1a	4435	4371	6	215	'1-5	66.39	12.4	0.4	intron	CG42598 -	chr3L_6_26355001	chr3L_26355001	0.17	RAL-340_100b
1152	chr3L	26367098	26367188	Cr1a	170	5	6	90	'2-4	66.32	11.2	0.5	intron	CG42598 -	chr3L_6_26365001	chr3L_26365001	0.33	RAL-340_100b
1153	chr3L	26373890	26373985	Gypsy12A_LTR	2128	2251	5	95	'1-4	67.04	16.8	0.3	intergenic	not near genes	chr3L_5_26370001	chr3L_26370001	0.20	RAL-340_100b
1154	chr3L	26417912	26417967	S2	117	1576	25	55	'12-13	73.20	0.0	25.0	intergenic	not near genes	chr3L_25_26415001	chr3L_26415001	0.48	RAL-340_100b
1155	chr3L	26479099	26479424	Doc	4686	69	20	325	'2-18	69.58	6.3	2.7	intergenic	not near genes	chr3L_20_26475001	chr3L_26475001	0.10	RAL-340_100b
1156	chr3L	26657837	26658106	INE-1	559	301	4	269	'2-2	61.89	8.5	0.4	intergenic	not near genes	chr3L_4_26655001	chr3L_26655001	0.50	RAL-340_100b
1157	chr3L	26710125	26710495	INE-1	549	553	5	370	'3-2	65.35	10.8	0.4	intergenic	not near genes	chr3L_5_26710001	chr3L_26710001	0.60	RAL-340_100b
1158	chr3L	26711205	26711310	Tc1-2	85	127	9	105	'7-2	75.26	10.0	0.8	intergenic	not near genes	chr3L_9_26710001	chr3L_26710001	0.78	RAL-340_100b
1159	chr3L	26719121	26719193	Tc1-2	79	171	6	72	'2-4	60.59	13.9	0.4	intergenic	not near genes	chr3L_6_26715001	chr3L_26715001	0.33	RAL-340_100b
1160	chr3L	26744531	26744722	Cr1a	4150	4305	13	191	'2-11	71.45	11.8	1.0	intergenic	not near genes	chr3L_13_26740001	chr3L_26740001	0.15	RAL-340_100b
1161	chr3L	26800112	26800190	aurora-element	166	12	4	78	'3-1	77.10	18.8	0.2	intergenic	not near genes	chr3L_4_26800001	chr3L_26800001	0.75	RAL-340_100b
1162	chr3L	26820136	26820236	1360	369	165	9	100	'4-5	69.67	18.7	0.5	intergenic	not near genes	chr3L_9_26820001	chr3L_26820001	0.44	RAL-340_100b
1163	chr3L	26834233	26834355	Ivk	110	117	4	122	'2-2	71.72	9.0	0.4	intergenic	not near genes	chr3L_4_26830001	chr3L_26830001	0.50	RAL-340_100b
1164	chr3L	27140087	27140120	FB	163	72	4	33	'1-3	72.40	44.3	0.1	intron	vtd +	chr3L_4_27140001	chr3L_27140001	0.25	RAL-340_100b
1165	chr3L	27145280	27145364	1360	3175	3364	6	84	'2-4	71.98	0.0	6.0	intron	vtd +	chr3L_6_27145001	chr3L_27145001	0.33	RAL-340_100b
1166	chr3L	27148480	27148540	1360	3376	3335	5	60	'1-4	73.33	30.4	0.2	intron	vtd +	chr3L_5_27145001	chr3L_27145001	0.20	RAL-340_100b
1167	chr3L	27155895	27156026	1360	72	42	4	131	'3-1	76.83	23.6	0.2	intron	vtd +	chr3L_4_27155001	chr3L_27155001	0.75	RAL-340_100b
1168	chr3L	27159910	27160056	G5A	2761	2762	6	146	'2-4	68.85	12.4	0.4	intergenic	not near genes	chr3L_6_27155001	chr3L_27155001	0.33	RAL-340_100b
1169	chr3L	27174766	27175138	pogo	2004	112	43	372	'24-19	67.88	13.5	3.0	intergenic	not near genes	chr3L_43_27170001	chr3L_27170001	0.56	RAL-340_100b
1170	chr3L	27253233	27253425	roo	8999	9042	12	192	'6-6	65.28	12.7	0.9	intergenic	not near genes	chr3L_12_27250001	chr3L_27250001	0.50	RAL-340_100b
1171	chr3L	27253384	27253449	Ivk	5358	5374	5	65	'1-4	61.22	13.4	0.3	intergenic	not near genes	chr3L_5_27250001	chr3L_27250001	0.20	RAL-340_100b
1172	chr3L	27269279	27269354	1360	3350	108	5	75	'4-1	61.33	13.7	0.3	intergenic	not near genes	chr3L_5_27265001	chr3L_27265001	0.80	RAL-340_100b
1173	chr3L	27278065	27278146	Cr1a	4304	4305	6	81	'2-4	74.58	16.5	0.3	intergenic	not near genes	chr3L_6_27275001	chr3L_27275001	0.33	RAL-340_100b
1174	chr3L	27279825	27279955	S-element	1715	1622	11	130	'6-5	71.29	10.6	0.9	intron	Dbp80 +	chr3L_11_27275001	chr3L_27275001	0.55	RAL-340_100b
1175	chr3L	27281216	27281328	S-element	1508	33	4	112	'2-2	67.92	15.0	0.2	intron	Dbp80 +	chr3L_4_27280001	chr3L_27280001	0.50	RAL-340_100b
1176	chr3L	27287252	27287440	1360	3348	26	16	188	'8-8	67.02	17.2	0.9	intron	Dbp80 +	chr3L_16_27285001	chr3L_27285001	0.50	RAL-340_100b
1177	chr3L	27334544	27334837	297	6878	338	4	293	'2-2	69.90	11.5	0.3	intron	Dbp80 +	chr3L_4_27330001	chr3L_27330001	0.50	RAL-340_100b
1178	chr3L	27357466	27357750	Tc3	317	370	5	284	'3-2	73.49	12.4	0.4	intron	Dbp80 +	chr3L_5_27355001	chr3L_27355001	0.60	RAL-340_100b
1179	chr3L	27358516	27358797	Tc3	1661	1498	19	281	'10-9	67.20	10.3	1.7	intron	Dbp80 +	chr3L_19_27355001	chr3L_27355001	0.53	RAL-340_100b
1180	chr3L	27359032	27359296	INE-1	16	140	4	264	'3-1	63.36	18.7	0.2	intron	Dbp80 +	chr3L_4_27355001	chr3L_27355001	0.75	RAL-340_100b
1181	chr3L	27366653	27366759	INE-1	555	544	5	106	'2-3	72.35	19.4	0.2	intron	Dbp80 +	chr3L_5_27365001	chr3L_27365001	0.40	RAL-340_100b
1182	chr3L	27390364	27390397	1360	3270	3228	9	33	'3-6	65.81	44.3	0.2	intron	Dbp80 +	chr3L_9_27390001	chr3L_27390001	0.33	RAL-340_100b
1183	chr3L	27395487	27395517	gtwin	50	20	6	30	'4-2	63.07	7.9	0.7	intron	Dbp80 +	chr3L_6_27395001	chr3L_27395001	0.67	RAL-340_100b
1184	chr3L	27665837	27665994	Ivk	5196	5361	9	157	'3-6	70.65	15.9	0.5	intergenic	not near genes	chr3L_9_27665001	chr3L_27665001	0.33	RAL-340_100b
1185	chr3L	27671284	27671340	ZAM	75	97	5	56	'3-2	62.53	13.7	0.3	intergenic	not near genes	chr3L_5_27670001	chr3L_27670001	0.60	RAL-340_100b
1186	chr3L	27727480	27727605	G-element	4284	4211	4	125	'3-1	65.85	10.9	0.3	intergenic	not near genes	chr3L_4_27725001	chr3L_27725001	0.75	RAL-340_100b
1187	chr3L	27863753	27863883	Quasimodo	72	167	4	130	'3-1	64.34	10.2	0.4	intergenic	not near genes	chr3L_4_27860001	chr3L_27860001	0.75	RAL-340_100b
1188	chr3L	27992698	27992799	Ivk	5258	5267	9	101	'5-4	69.10	14.2	0.6	intron	CG17514 -	chr3L_9_27990001	chr3L_27990001	0.56	RAL-340_100b
1189	chr3L	28010409	28010493	jockey2	3302	3290	5	84	'4-1	70.42	16.4	0.3	intron	CG17514 -	chr3L_5_28010001	chr3L_28010001	0.80	RAL-340_100b
1190	chr3L	28011236	28011613	jockey2	3317	3330	9	377	'4-5	74.67	9.8	0.8	intron	CG17514 -	chr3L_9_28010001	chr3L_28010001	0.44	RAL-340_100b
1191	chr3R	545087	545221	copia	255	4871	19	134	'13-6	66.36	5.6	2.9	intergenic	not near genes	chr3R_19_545001	chr3R_545001	0.68	RAL-340_100b
1192	chr3R	556455	556530	Tc1-2	1614	21	5	75	'4-1	58.44	9.4	0.5	intergenic	not near genes	chr3R_5_555001	chr3R_555001	0.80	RAL-340_100b
1193	chr3R	567799	567914	1360	157	43	4	115	'2-2	68.40	10.1	0.4	intergenic	not near genes	chr3R_4_565001	chr3R_565001	0.50	RAL-340_100b
1194	chr3R	759404	759434	Doc3-element	205	194	4	30	'1-3	69.47	18.1	0.2	intergenic	not near genes	chr3R_4_755001	chr3R_755001	0.25	RAL-340_100b
1195	chr3R	779323	779368	Doc3-element	4635	4566	5	45	'4-1	66.54	8.2	0.5	intergenic	not near genes	chr3R_5_775001	chr3R_775001	0.80	RAL-340_100b
1196	chr3R	803841	803954	G5	4801	4636	5	113	'3-2	65.33	6.2	0.7	intergenic	not near genes	chr3R_5_800001	chr3R_800001	0.60	RAL-340_100b
1197	chr3R	844347	844473	Doc3-element	4630	4710	23	126	'12-11	70.56	25.6	0.9	intron	CG42621 +	chr3R_23_840001	chr3R_840001	0.52	RAL-340_100b
1198	chr3R	869101	869176	G5A	2700	2749	7	75	'2-5	62.28	30.0	0.2	intron	CG42621 +	chr3R_7_865001	chr3R_865001	0.29	RAL-340_100b
1199	chr3R	972788	973191	copia	253	19	11	403	'10-1	70.91	5.8	1.6	intergenic	not near genes	chr3R_11_970001	chr3R_970001	0.91	RAL-340_100b
1200	chr3R	1047962	1048059	Stalker2	7631	14	16	97	'8-8	59.09	4.8	2.8	intron	CG15831 +	chr3R_16_1045001	chr3R_1045001	0.50	RAL-340_100b
1201	chr3R	1135319	1135491	Cr1a	4314	4448	5	172	'4-1	67.71	10.2	0.4	intron	CG15831 +	chr3R_5_1135001	chr3R_1135001	0.80	RAL-340_100b
1202	chr3R	1146434	1146480	gypsy4	352	365	6	46	'3-3	68.86	18.3	0.3	intron	CG15831 +	chr3R_6_1145001	chr3R_1145001	0.50	RAL-340_100b
1203	chr3R	1193577	1193698	Cr1a	4356	4284	7	121	'4-3	66.26	9.9	0.6	intergenic	not near genes	chr3R_7_1190001	chr3R_1190001	0.57	RAL-340_100b
1204	chr3R	1202714	1202756	1360	57	47	11	42	'10-1	76.06	16.6	0.6	intergenic	not near genes	chr3R_11_1200001	chr3R_1200001	0.91	RAL-340_100b
1205	chr3R	1208740	1208909	transib1	2124	1935	6	169	'2-4	71.78	9.0	0.6	intergenic	not near genes	chr3R_6_1205001	chr3R_1205001	0.33	RAL-340_100b
1206	chr3R	1221597	1221679	Tom1	289	362	6	82	'5-1	66.54	9.7	0.6	intergenic	not near genes	chr3R_6_1220001	chr3R_1220001	0.83	RAL-340_100b
1207	chr3R	1272017	1272099	I-element	5183	217	5	82	'2-3	60.23	738.3	0.0	intergenic	not near genes	chr3R_5_1270001	chr3R_1270001	0.40	RAL-340_100b
1208	chr3R	1283401	1283457	diver2	149	282	5	56	'4-1	74.66	11.6	0.4	intergenic	not near genes	chr3R_5_1280001	chr3R_1280001	0.80	RAL-340_100b
1209	chr3R	1310177	1310258	diver2	155	4550	5	81	'3-2	75.46	13.7	0.3	intergenic	not near genes	chr3R_5_1310001	chr3R_1310001	0.60	RAL-340_100b
1210	chr3R	1449256	1449326	F-element	20	93	8	70	'7-1	58.06	8.2	0.9	intron	CG40155 +	chr3R_8_1445001	chr3R_1445001	0.88	RAL-340_100b
1211	chr3R	1497662	1497807	INE-1	537	546	4	145	'1-3	72.96	13.3	0.3	intergenic	not near genes	chr3R_4_1495001	chr3R_1495001	0.25	RAL-340_100b
1212	chr3R	1540482	1540670	Tom1	126	313	4	188	'3-1	69.52	9.5	0.4	intergenic	not near genes	chr3R_4_1540001	chr3R_1540001	0.75	RAL-340_100b
1213	chr3R	1836627	1836802	transib3	402	33	4	175	'2-2	67.14	10.9	0.3	intergenic	not near genes	chr3R_4_1835001	chr3R_1835001	0.50	RAL-340_100b
1214	chr3R	1838184	1838237	Doc	4689	4631	10	53	'6-4	70.76	8.2	1.1	intergenic	not near genes	chr3R_10_1835001	chr3R_1835001	0.60	RAL-340_100b
1215	chr3R	1864382	1864436	G4	3625	3807	4	54	'3-1	59.77	11.4	0.3	intron	CG42623 +	chr3R_4_1860001	chr3R_1860001	0.75	RAL-340_100b
1216	chr3R	1966283	1966376	Tom1	255	309	11	93	'2-9	69.85	12.4	0.8	intergenic	not near genes	chr3R_11_1965001	chr3R_1965001	0.18	RAL-340_100b
1217	chr3R	1977610	1977890	invader2	4872	5021	4	280	'2-2	69.09	9.4	0.4	intergenic	not near genes	chr3R_4_1975001	chr3R_1975001	0.50	RAL-340_100b
1218	chr3R	2156619	2156758	Quasimodo	483	7272	6	139	'2-4	69.58	8.4	0.6	intergenic	not near genes	chr3R_6_2155001	chr3R_2155001	0.33	RAL-340_100b
1219	chr3R	2159464	2159648	transib2	172	65	5	184	'3-2	65.37	9.3	0.5	intergenic	not near genes	chr3R_5_2155001	chr3R_2155001	0.60	RAL-340_100b
1220	chr3R	2270656	2270761	Stalker3T	339	227	7	105	'6-1	68.57	100.5	0.1	intergenic	not near genes	chr3R_7_2270001	chr3R_2270001	0.86	RAL-340_100b
1221	chr3R	2387214	2387243	Quasimodo	324	179	4	29	'1-3	67.39	10.0	0.4	intergenic	not near genes	chr3R_4_2385001	chr3R_2385001	0.25	RAL-340_100b
1222	chr3R	2413636	2413850	1360	98	39	5	214	'3-2	72.03	8.4	0.5	intergenic	CG41527 +	chr3R_5_2410001	chr3R_2410001	0.60	RAL-340_100b
1223	chr3R	2422655	2422728	1360	3346	3334	5	73	'3-2	70.38	18.8	0.3	intergenic	not near genes	chr3R_5_2420001	chr3R_2420001	0.60	RAL-340_100b
1224	chr3R	2424350	2424473	Ivk	5142	5190	29	123	'28-1	65.92	8.1	3.2	intergenic	not near genes	chr3R_29_2420001	chr3R_2420001	0.97	RAL-340_100b
1225	chr3R	2449003	2449110	G5A	2436	2393	17	107	'8-9	70.26	84.9	0.2	intergenic	not near genes	chr3R_17_2445001	chr3R_2445001	0.47	RAL-340_100b
1226	chr3R	2471025	2471365	Cr1a	4332	4317	9	340	'1-8	66.77	13.8	0.6	intergenic	not near genes	chr3R_9_2470001	chr3R_2470001	0.11	RAL-340_100b
1227	chr3R	2472706	2472992	INE-1	533	531	5	286	'2-3	63.68	9.1	0.5	intergenic	not near genes	chr3R_5_2470001	chr3R_2470001	0.40	RAL-340_100b
1228	chr3R	2533892	2533954	gypsy8	4815	164	5	62	'2-3	58.01	12.2	0.4	intergenic	not near genes	chr3R_5_2530001	chr3R_2530001	0.40	RAL-340_100b
1229	chr3R	2610432	2610496	INE-1	556	580	4	64	'2-2	71.48	11.5	0.3	intron	CG41056 -	chr3R_4_2610001	chr3R_2610001	0.50	RAL-340_100b
1230	chr3R	2628870	2628898	1360	3386	116	5	28	'3-2	66.38	18.0	0.3	intron	CG41056 -	chr3R_5_2625001	chr3R_2625001	0.60	RAL-340_100b
1231	chr3R	2684646	2684810	S-element	1614	1673	4	164	'3-1	72.81	11.9	0.3	intron	CG41056 -	chr3R_4_2680001	chr3R_2680001	0.75	RAL-340_100b
1232	chr3R	2690080	2690574	mdg1	29	42	10	494	'7-3	66.61	7.0	1.2	intron	CG41056 -	chr3R_10_2690001	chr3R_2690001	0.70	RAL-340_100b
1233	chr3R	2694389	2694513	diver2	4785	261	5	124	'4-1	72.22	16.1	0.3	intron	CG41056 -	chr3R_5_2690001	chr3R_2690001	0.80	RAL-340_100b
1234	chr3R	2738527	2738628	Doc3-element	4495	4643	13	101	'4-9	63.32	1.8	4.6	intron	CG41056 -	chr3R_13_2735001	chr3R_2735001	0.31	RAL-340_100b
1235	chr3R	2916491	2916586	Circe	7074	7067	5	95	'4-1	71.07	9.7	0.5	intergenic	not near genes	chr3R_5_2915001	chr3R_2915001	0.80	RAL-340_100b
1236	chr3R	2981870	2981924	baggins	5375	5387	4	54	'3-1	73.10	16.9	0.2	intron	CG42618 -	chr3R_4_2980001	chr3R_2980001	0.75	RAL-340_100b
1237	chr3R	2999956	3000015	Doc3-element	4636	4604	5	59	'2-3	70.78	12.9	0.4	intron	CG42618 -	chr3R_5_2995001	chr3R_2995001	0.40	RAL-340_100b
1238	chr3R	3080446	3080561	gypsy9	377	5229	4	115	'1-3	68.29	10.3	0.4	intergenic	not near genes	chr3R_4_3080001	chr3R_3080001	0.25	RAL-340_100b
1239	chr3R	3267339	3267533	mariner2	371	211	4	194	'1-3	68.53	9.0	0.4	intergenic	not near genes	chr3R_4_3265001	chr3R_3265001	0.25	RAL-340_100b
1240	chr3R	3468239	3468300	INE-1	537	542	5	61	'2-3	72.17	10.7	0.4	intron	Parp -	chr3R_5_3465001	chr3R_3465001	0.40	RAL-340_100b
1241	chr3R	3508486	3508540	Tc1-2	1593	1461	4	54	'3-1	67.69	13.0	0.3	intron	Parp -	chr3R_4_3505001	chr3R_3505001	0.75	RAL-340_100b
1242	chr3R	3510077	3510195	Tc1-2	262	72	4	118	'1-3	73.89	17.7	0.2	intron	Parp -	chr3R_4_3510001	chr3R_3510001	0.25	RAL-340_100b
1243	chr3R	3557767	3557818	F-element	4629	4638	8	51	'3-5	68.71	10.3	0.7	intron	Parp -	chr3R_8_3555001	chr3R_3555001	0.38	RAL-340_100b
1244	chr3R	3582688	3582813	Tc1-2	1545	1421	6	125	'4-2	66.09	12.8	0.4	intron	Parp -	chr3R_6_3580001	chr3R_3580001	0.67	RAL-340_100b
1245	chr3R	3587558	3587598	1360	3246	3224	4	40	'2-2	66.56	21.9	0.2	intergenic	not near genes	chr3R_4_3585001	chr3R_3585001	0.50	RAL-340_100b
1246	chr3R	3589216	3589428	1360	3119	3233	9	212	'7-2	67.96	14.6	0.6	intergenic	not near genes	chr3R_9_3585001	chr3R_3585001	0.78	RAL-340_100b
1247	chr3R	3598900	3598929	Doc3-element	431	469	6	29	'4-2	65.86	17.3	0.3	intergenic	not near genes	chr3R_6_3595001	chr3R_3595001	0.67	RAL-340_100b
1248	chr3R	3618824	3618960	rooA	43	7149	5	136	'3-2	77.70	11.8	0.4	intergenic	not near genes	chr3R_5_3615001	chr3R_3615001	0.60	RAL-340_100b
1249	chr3R	3620642	3620694	1360	3342	232	7	52	'3-4	66.13	30.9	0.2	intergenic	not near genes	chr3R_7_3620001	chr3R_3620001	0.43	RAL-340_100b
1250	chr3R	3620654	3620908	gypsy5	7186	7011	59	254	'57-2	65.25	15.0	3.7	intergenic	not near genes	chr3R_59_3620001	chr3R_3620001	0.97	RAL-340_100b
1251	chr3R	3626962	3627218	1360	4	52	7	256	'3-4	77.05	13.7	0.5	exon	Alg-2 +	chr3R_7_3625001	chr3R_3625001	0.43	RAL-340_100b
1252	chr3R	3735605	3735633	Tc1-2	1554	1555	4	28	'2-2	71.14	33.7	0.1	intron	Tim17b +	chr3R_4_3735001	chr3R_3735001	0.50	RAL-340_100b
1253	chr3R	3746034	3746235	1360	13	3334	8	201	'3-5	68.02	13.1	0.6	intergenic	not near genes	chr3R_8_3745001	chr3R_3745001	0.38	RAL-340_100b
1254	chr3R	3748713	3748882	1360	3100	3358	8	169	'7-1	72.16	13.9	0.5	intergenic	not near genes	chr3R_8_3745001	chr3R_3745001	0.88	RAL-340_100b
1255	chr3R	3774794	3774938	F-element	4613	4532	9	144	'4-5	70.38	17.0	0.5	intergenic	not near genes	chr3R_9_3770001	chr3R_3770001	0.44	RAL-340_100b
1256	chr3R	3854618	3854714	Idefix	7135	298	4	96	'2-2	71.88	17.1	0.2	intron	CG41099 +	chr3R_4_3850001	chr3R_3850001	0.50	RAL-340_100b
1257	chr3R	3902229	3902463	Rt1b	407	5112	4	234	'1-3	67.15	13.9	0.3	intergenic	not near genes	chr3R_4_3900001	chr3R_3900001	0.25	RAL-340_100b
1258	chr3R	3905874	3905964	accord2	7492	77	6	90	'2-4	63.20	35.9	0.2	intergenic	not near genes	chr3R_6_3905001	chr3R_3905001	0.33	RAL-340_100b
1259	chr3R	4014632	4014780	INE-1	532	546	4	148	'1-3	61.47	9.9	0.4	intergenic	not near genes	chr3R_4_4010001	chr3R_4010001	0.25	RAL-340_100b
1260	chr3R	4025421	4025494	Porto1	4623	4544	7	73	'2-5	72.16	22.1	0.3	intergenic	not near genes	chr3R_7_4025001	chr3R_4025001	0.29	RAL-340_100b
1261	chr3R	4094959	4095181	INE-1	165	144	5	222	'2-3	75.82	16.3	0.3	intron	CG42402 +	chr3R_5_4090001	chr3R_4090001	0.40	RAL-340_100b
1262	chr3R	4132575	4132857	INE-1	535	497	4	282	'1-3	68.49	8.5	0.4	intron	Gfat1 +	chr3R_4_4130001	chr3R_4130001	0.25	RAL-340_100b
1263	chr3R	4139622	4139746	Cr1a	4322	4223	7	124	'4-3	69.30	18.0	0.4	intergenic	not near genes	chr3R_7_4135001	chr3R_4135001	0.57	RAL-340_100b
1264	chr3R	4141181	4141245	I-element	59	164	9	64	'6-3	71.86	28.3	0.3	intergenic	not near genes	chr3R_9_4140001	chr3R_4140001	0.67	RAL-340_100b
1265	chr3R	4144578	4144700	Ivk	61	169	5	122	'2-3	73.25	14.8	0.3	intergenic	not near genes	chr3R_5_4140001	chr3R_4140001	0.40	RAL-340_100b
1266	chr3R	4153332	4153496	Idefix	7383	7209	5	164	'1-4	73.45	7.0	0.6	intergenic	not near genes	chr3R_5_4150001	chr3R_4150001	0.20	RAL-340_100b
1267	chr3R	4169415	4169511	1360	255	139	4	96	'1-3	72.00	10.3	0.4	intergenic	not near genes	chr3R_4_4165001	chr3R_4165001	0.25	RAL-340_100b
1268	chr3R	4189417	4189527	HB	1489	1587	8	110	'3-5	64.73	13.4	0.6	intergenic	Dsk -	chr3R_8_4185001	chr3R_4185001	0.38	RAL-340_100b
1269	chr3R	4191606	4191780	Tc1-2	1524	1427	10	174	'5-5	71.15	11.6	0.8	intergenic	not near genes	chr3R_10_4190001	chr3R_4190001	0.50	RAL-340_100b
1270	chr3R	4193780	4194115	INE-1	296	549	4	335	'1-3	75.00	20.2	0.2	intergenic	not near genes	chr3R_4_4190001	chr3R_4190001	0.25	RAL-340_100b
1271	chr3R	4224393	4224575	HB	325	30	6	182	'2-4	68.81	15.8	0.4	intron	aux +	chr3R_6_4220001	chr3R_4220001	0.33	RAL-340_100b
1272	chr3R	4307242	4307317	INE-1	542	499	4	75	'2-2	74.12	21.2	0.2	intergenic	not near genes	chr3R_4_4305001	chr3R_4305001	0.50	RAL-340_100b
1273	chr3R	4322566	4322837	INE-1	244	83	10	271	'8-2	66.88	21.3	0.4	intron	CG9795 +	chr3R_10_4320001	chr3R_4320001	0.80	RAL-340_100b
1274	chr3R	4354964	4355042	gypsy4	6779	6754	5	78	'1-4	71.58	29.5	0.2	intergenic	not near genes	chr3R_5_4350001	chr3R_4350001	0.20	RAL-340_100b
1275	chr3R	4358252	4358766	Tc3	1290	1705	6	514	'2-4	70.21	6.2	0.8	intergenic	not near genes	chr3R_6_4355001	chr3R_4355001	0.33	RAL-340_100b
1276	chr3R	4420986	4421075	rooA	31	24	6	89	'3-3	70.37	14.8	0.4	intergenic	not near genes	chr3R_6_4420001	chr3R_4420001	0.50	RAL-340_100b
1277	chr3R	4487882	4487940	Tc1-2	154	194	4	58	'1-3	69.94	29.1	0.1	intergenic	Fip1 +	chr3R_4_4485001	chr3R_4485001	0.25	RAL-340_100b
1278	chr3R	4489329	4489419	Tc1-2	1388	5	5	90	'2-3	64.05	21.6	0.2	intergenic	not near genes	chr3R_5_4485001	chr3R_4485001	0.40	RAL-340_100b
1279	chr3R	4497713	4497747	Fw2	3873	3872	9	34	'3-6	71.55	30.9	0.3	intron	CG34357 -	chr3R_9_4495001	chr3R_4495001	0.33	RAL-340_100b
1280	chr3R	4501608	4501734	Fw2	81	28	7	126	'6-1	68.48	20.3	0.3	intron	CG34357 -	chr3R_7_4500001	chr3R_4500001	0.86	RAL-340_100b
1281	chr3R	4512114	4512243	Tc1-2	49	205	5	129	'3-2	70.05	17.0	0.3	intron	CG34357 -	chr3R_5_4510001	chr3R_4510001	0.60	RAL-340_100b
1282	chr3R	4525792	4526348	INE-1	499	548	9	556	'5-4	72.11	12.0	0.7	intron	CG34357 -	chr3R_9_4525001	chr3R_4525001	0.56	RAL-340_100b
1283	chr3R	4559738	4559843	HB	1360	1360	10	105	'6-4	70.54	16.9	0.6	intergenic	not near genes	chr3R_10_4555001	chr3R_4555001	0.60	RAL-340_100b
1284	chr3R	4565291	4565326	1360	3385	43	5	35	'2-3	72.41	40.0	0.1	intergenic	not near genes	chr3R_5_4565001	chr3R_4565001	0.40	RAL-340_100b
1285	chr3R	4567227	4567345	transib3	2684	2681	4	118	'2-2	63.34	20.1	0.2	intergenic	not near genes	chr3R_4_4565001	chr3R_4565001	0.50	RAL-340_100b
1286	chr3R	4571459	4571531	1360	159	48	35	72	'1-34	65.11	16.8	2.0	intergenic	not near genes	chr3R_35_4570001	chr3R_4570001	0.03	RAL-340_100b
1287	chr3R	4576563	4577070	Tc3	40	492	12	507	'8-4	70.95	16.6	0.7	intergenic	not near genes	chr3R_12_4575001	chr3R_4575001	0.67	RAL-340_100b
1288	chr3R	4577333	4577708	Tc3	1338	1707	7	375	'3-4	70.55	10.0	0.6	intergenic	not near genes	chr3R_7_4575001	chr3R_4575001	0.43	RAL-340_100b
1289	chr3R	4579432	4579513	Cr1a	4418	4335	4	81	'2-2	69.70	12.7	0.3	intergenic	not near genes	chr3R_4_4575001	chr3R_4575001	0.50	RAL-340_100b
1290	chr3R	4591513	4591546	INE-1	506	16	5	33	'3-2	64.09	25.0	0.2	intergenic	not near genes	chr3R_5_4590001	chr3R_4590001	0.60	RAL-340_100b
1291	chr3R	4594271	4594755	Cr1a	4307	4309	6	484	'1-5	63.01	7.4	0.7	intergenic	not near genes	chr3R_6_4590001	chr3R_4590001	0.17	RAL-340_100b
1292	chr3R	4605309	4605808	INE-1	553	542	4	499	'2-2	60.53	14.2	0.3	intergenic	not near genes	chr3R_4_4605001	chr3R_4605001	0.50	RAL-340_100b
1293	chr3R	4609402	4609572	1360	1	3348	8	170	'5-3	68.74	20.0	0.4	intergenic	not near genes	chr3R_8_4605001	chr3R_4605001	0.62	RAL-340_100b
1294	chr3R	4610715	4611046	1360	3342	113	11	331	'9-2	70.39	15.3	0.7	intergenic	not near genes	chr3R_11_4610001	chr3R_4610001	0.82	RAL-340_100b
1295	chr3R	4622046	4622464	297	6630	6946	62	418	'20-42	67.47	11.4	5.0	intron	5-HT2A +	chr3R_62_4620001	chr3R_4620001	0.32	RAL-340_100b
1296	chr3R	4630021	4630426	INE-1	11	220	4	405	'2-2	70.50	13.0	0.3	intron	5-HT2A +	chr3R_4_4630001	chr3R_4630001	0.50	RAL-340_100b
1297	chr3R	4683105	4683185	S-element	1569	1711	5	80	'4-1	65.87	10.5	0.4	intron	CG43427 +	chr3R_5_4680001	chr3R_4680001	0.80	RAL-340_100b
1298	chr3R	4721869	4722201	INE-1	246	245	4	332	'3-1	70.73	20.3	0.2	intron	Nep2 -	chr3R_4_4720001	chr3R_4720001	0.75	RAL-340_100b
1299	chr3R	4740950	4741255	INE-1	158	142	6	305	'4-2	62.53	19.8	0.3	intron	tacc -	chr3R_6_4740001	chr3R_4740001	0.67	RAL-340_100b
1300	chr3R	4759506	4759732	hopper	27	42	8	226	'7-1	72.28	16.5	0.5	intron,intron	atms +,CG44098 -	chr3R_8_4755001	chr3R_4755001	0.88	RAL-340_100b
1301	chr3R	4761221	4761411	hopper	1232	1334	15	190	'4-11	72.42	14.8	0.9	intron,intron	atms +,CG44098 -	chr3R_15_4760001	chr3R_4760001	0.27	RAL-340_100b
1302	chr3R	4761300	4761355	Doc2-element	225	226	4	55	'2-2	73.09	19.5	0.2	intron,intron	atms +,CG44098 -	chr3R_4_4760001	chr3R_4760001	0.50	RAL-340_100b
1303	chr3R	4831765	4831850	Tc1	1553	1394	5	85	'1-4	68.18	20.6	0.2	intergenic	CG14659 -	chr3R_5_4830001	chr3R_4830001	0.20	RAL-340_100b
1304	chr3R	4833142	4833172	Tc1	53	22	4	30	'2-2	56.47	39.2	0.1	intergenic	not near genes	chr3R_4_4830001	chr3R_4830001	0.50	RAL-340_100b
1305	chr3R	4943472	4943612	Tc3	309	449	7	140	'6-1	63.85	12.1	0.5	intron	Cdep +	chr3R_7_4940001	chr3R_4940001	0.86	RAL-340_100b
1306	chr3R	4944065	4944598	Tc3	1363	1673	12	533	'3-9	63.23	10.7	1.0	intron	Cdep +	chr3R_12_4940001	chr3R_4940001	0.25	RAL-340_100b
1307	chr3R	4944695	4944866	Tc3	1504	1707	9	171	'4-5	71.00	16.8	0.5	intron	Cdep +	chr3R_9_4940001	chr3R_4940001	0.44	RAL-340_100b
1308	chr3R	4947762	4947881	INE-1	128	174	4	119	'3-1	71.88	4.5	0.7	intergenic	snRNA:U1:82Eb -,CR45188 +	chr3R_4_4945001	chr3R_4945001	0.75	RAL-340_100b
1309	chr3R	5027270	5027398	Chouto	48	93	10	128	'6-4	77.78	15.5	0.6	intergenic	not near genes	chr3R_10_5025001	chr3R_5025001	0.60	RAL-340_100b
1310	chr3R	5219131	5219242	Doc	62	47	33	111	'5-28	66.79	14.8	2.1	intron	Prosbeta2R2 -	chr3R_33_5215001	chr3R_5215001	0.15	RAL-340_100b
1311	chr3R	5259171	5259240	S-element	1715	1672	4	69	'1-3	73.81	19.1	0.2	intron,intron	Hph +,Tim17a2 -	chr3R_4_5255001	chr3R_5255001	0.25	RAL-340_100b
1312	chr3R	5264873	5265125	P-element	9	70	11	252	'10-1	47.49	14.0	0.7	intron	Hph +	chr3R_11_5260001	chr3R_5260001	0.91	RAL-340_100b
1313	chr3R	5365201	5365346	HB	1546	1466	10	145	'3-7	71.97	30.7	0.3	intron	Cerk -	chr3R_10_5365001	chr3R_5365001	0.30	RAL-340_100b
1314	chr3R	5555817	5556199	Doc	4428	356	6	382	'4-2	67.50	16.2	0.3	exon	Snm1 +	chr3R_6_5555001	chr3R_5555001	0.67	RAL-340_100b
1315	chr3R	5599774	5600214	accord	7187	6952	4	440	'1-3	69.18	25.4	0.2	intron	kra -	chr3R_4_5595001	chr3R_5595001	0.25	RAL-340_100b
1316	chr3R	5732619	5732784	INE-1	546	163	4	165	'2-2	76.55	13.5	0.3	intergenic	not near genes	chr3R_4_5730001	chr3R_5730001	0.50	RAL-340_100b
1317	chr3R	5764272	5764349	Stalker4	7111	87	4	77	'1-3	69.94	27.2	0.1	intron	CG2082 -	chr3R_4_5760001	chr3R_5760001	0.25	RAL-340_100b
1318	chr3R	5765789	5766027	297	6581	378	43	238	'36-7	66.76	11.6	3.4	intron	CG2082 -	chr3R_43_5765001	chr3R_5765001	0.84	RAL-340_100b
1319	chr3R	5934368	5934745	roo	18	8979	65	377	'29-36	67.36	10.6	5.6	intron	CG34113 -	chr3R_65_5930001	chr3R_5930001	0.45	RAL-340_100b
1320	chr3R	6130554	6130765	roo	408	96	60	211	'45-15	67.66	7.9	6.7	intergenic	not near genes	chr3R_60_6130001	chr3R_6130001	0.75	RAL-340_100b
1321	chr3R	6142374	6142665	Tc1-2	233	226	4	291	'3-1	68.19	15.2	0.2	intergenic	not near genes	chr3R_4_6140001	chr3R_6140001	0.75	RAL-340_100b
1322	chr3R	6254043	6254449	S-element	1552	1661	5	406	'2-3	72.49	10.5	0.4	intergenic	not near genes	chr3R_5_6250001	chr3R_6250001	0.40	RAL-340_100b
1323	chr3R	6365401	6365677	R1A1-element	5274	4988	4	276	'3-1	64.48	15.7	0.2	intron	CG42724 -	chr3R_4_6365001	chr3R_6365001	0.75	RAL-340_100b
1324	chr3R	6404877	6405281	297	25	6899	38	404	'11-27	68.80	12.2	2.9	intron	Dmtn -	chr3R_38_6400001	chr3R_6400001	0.29	RAL-340_100b
1325	chr3R	6419100	6419142	Rt1a	5063	4911	16	42	'7-9	68.78	23.7	0.6	intron	gpp +	chr3R_16_6415001	chr3R_6415001	0.44	RAL-340_100b
1326	chr3R	6461294	6461419	S-element	1391	1481	9	125	'7-2	71.44	13.9	0.6	intergenic	not near genes	chr3R_9_6460001	chr3R_6460001	0.78	RAL-340_100b
1327	chr3R	6533904	6533933	Doc	4692	4696	4	29	'3-1	65.77	30.4	0.1	intron	dpr11 -	chr3R_4_6530001	chr3R_6530001	0.75	RAL-340_100b
1328	chr3R	6534711	6534919	INE-1	171	542	4	208	'2-2	60.91	16.7	0.2	intron	dpr11 -	chr3R_4_6530001	chr3R_6530001	0.50	RAL-340_100b
1329	chr3R	6552015	6552264	mdg1	11	407	37	249	'33-4	67.62	8.1	4.1	intron	dpr11 -	chr3R_37_6550001	chr3R_6550001	0.89	RAL-340_100b
1330	chr3R	6688024	6688189	roo	336	6	52	165	'26-26	66.97	18.9	2.6	3` UTR	Ccp84Ag +	chr3R_52_6685001	chr3R_6685001	0.50	RAL-340_100b
1331	chr3R	6813478	6813879	copia	4916	249	50	401	'29-21	66.70	13.2	3.5	intron	CR42651 -	chr3R_50_6810001	chr3R_6810001	0.58	RAL-340_100b
1332	chr3R	6831507	6831810	roo	9033	8731	28	303	'7-21	71.39	9.8	2.6	intron	Scr -	chr3R_28_6830001	chr3R_6830001	0.25	RAL-340_100b
1333	chr3R	7039894	7040363	INE-1	85	556	7	469	'3-4	63.82	10.3	0.6	intergenic	CR44933 +	chr3R_7_7035001	chr3R_7035001	0.43	RAL-340_100b
1334	chr3R	7080451	7080686	G4	3831	3620	13	235	'5-8	70.90	23.9	0.5	intergenic	Ref1 -	chr3R_13_7080001	chr3R_7080001	0.38	RAL-340_100b
1335	chr3R	7103137	7103361	S-element	1712	1633	12	224	'11-1	68.39	5.5	1.8	intron	Alh -	chr3R_12_7100001	chr3R_7100001	0.92	RAL-340_100b
1336	chr3R	7109662	7109894	P-element	2831	2883	12	232	'3-9	48.16	17.0	0.7	intron	Alh -	chr3R_12_7105001	chr3R_7105001	0.25	RAL-340_100b
1337	chr3R	7161807	7162091	297	376	29	32	284	'25-7	68.43	9.6	3.0	intergenic	not near genes	chr3R_32_7160001	chr3R_7160001	0.78	RAL-340_100b
1338	chr3R	7261248	7261314	Porto1	4410	4631	4	66	'2-2	71.33	18.0	0.2	intron	Gld -	chr3R_4_7260001	chr3R_7260001	0.50	RAL-340_100b
1339	chr3R	7355452	7355510	S-element	32	99	4	58	'3-1	64.75	5.7	0.6	intergenic	not near genes	chr3R_4_7355001	chr3R_7355001	0.75	RAL-340_100b
1340	chr3R	7424882	7425012	Rt1b	5112	5086	4	130	'1-3	72.00	14.4	0.3	intergenic	not near genes	chr3R_4_7420001	chr3R_7420001	0.25	RAL-340_100b
1341	chr3R	7485180	7485209	jockey	4906	4973	4	29	'2-2	72.62	39.2	0.1	intergenic	not near genes	chr3R_4_7485001	chr3R_7485001	0.50	RAL-340_100b
1342	chr3R	7492212	7492569	1360	3378	94	80	357	'8-72	65.83	10.2	7.1	intron	alpha-Est10 -	chr3R_80_7490001	chr3R_7490001	0.10	RAL-340_100b
1343	chr3R	7513290	7513586	opus	7115	400	35	296	'9-26	68.35	8.7	3.6	intron	alpha-Est8 -	chr3R_35_7510001	chr3R_7510001	0.26	RAL-340_100b
1344	chr3R	7640626	7640683	HB	1541	1578	4	57	'1-3	67.05	19.8	0.2	intergenic	not near genes	chr3R_4_7640001	chr3R_7640001	0.25	RAL-340_100b
1345	chr3R	7694420	7694607	invader3	21	254	14	187	'4-10	66.90	15.3	0.9	3` UTR	Nlg1 +	chr3R_14_7690001	chr3R_7690001	0.29	RAL-340_100b
1346	chr3R	7819510	7819641	invader3	5423	82	12	131	'7-5	70.98	26.9	0.4	intron	CG34384 +	chr3R_12_7815001	chr3R_7815001	0.58	RAL-340_100b
1347	chr3R	7849569	7849677	1360	3280	64	6	108	'2-4	70.29	21.4	0.3	intron	CG34384 +	chr3R_6_7845001	chr3R_7845001	0.33	RAL-340_100b
1348	chr3R	7850812	7851001	1360	199	56	5	189	'3-2	72.70	26.3	0.2	intron	CG34384 +	chr3R_5_7850001	chr3R_7850001	0.60	RAL-340_100b
1349	chr3R	7868802	7869210	jockey	16	4986	58	408	'13-45	65.73	10.3	5.1	intron	CG17816 -	chr3R_58_7865001	chr3R_7865001	0.22	RAL-340_100b
1350	chr3R	8005045	8005176	INE-1	155	119	13	131	'12-1	82.98	16.8	0.7	intron	CG2698 +	chr3R_13_8005001	chr3R_8005001	0.92	RAL-340_100b
1351	chr3R	8055748	8056071	HMS-Beagle	7034	3	86	323	'3-83	66.07	14.1	5.7	3` UTR	CG43060 +	chr3R_86_8055001	chr3R_8055001	0.03	RAL-340_100b
1352	chr3R	8055977	8056043	HMS-Beagle2	7158	212	4	66	'3-1	68.52	17.8	0.2	intergenic	CG43060 +	chr3R_4_8055001	chr3R_8055001	0.75	RAL-340_100b
1353	chr3R	8073300	8073443	jockey	65	4985	17	143	'7-10	67.49	10.1	1.5	intron	mAChR-B +	chr3R_17_8070001	chr3R_8070001	0.41	RAL-340_100b
1354	chr3R	8073429	8073470	gypsy7	5011	5009	6	41	'3-3	78.67	13.1	0.4	intron	mAChR-B +	chr3R_6_8070001	chr3R_8070001	0.50	RAL-340_100b
1355	chr3R	8077284	8077650	accord	7119	181	4	366	'1-3	70.15	28.1	0.1	intron	mAChR-B +	chr3R_4_8075001	chr3R_8075001	0.25	RAL-340_100b
1356	chr3R	8143859	8144022	Doc	4646	4625	6	163	'3-3	74.53	8.1	0.7	intergenic	not near genes	chr3R_6_8140001	chr3R_8140001	0.50	RAL-340_100b
1357	chr3R	8153122	8153253	297	6583	395	21	131	'9-12	68.76	11.8	1.6	intron	grn -	chr3R_21_8150001	chr3R_8150001	0.43	RAL-340_100b
1358	chr3R	8339641	8340029	Doc	4659	67	56	388	'5-51	66.18	12.9	4.0	intergenic	CG9603 -	chr3R_56_8335001	chr3R_8335001	0.09	RAL-340_100b
1359	chr3R	8426278	8426460	roo	8664	8973	62	182	'40-22	67.80	12.8	4.5	intron	CG45263 -	chr3R_62_8425001	chr3R_8425001	0.65	RAL-340_100b
1360	chr3R	8490029	8490153	jockey	4885	4895	7	124	'6-1	72.19	34.3	0.2	intergenic	not near genes	chr3R_7_8490001	chr3R_8490001	0.86	RAL-340_100b
1361	chr3R	8509883	8509937	jockey	23	10	6	54	'4-2	64.49	18.7	0.3	intergenic	Or85b -	chr3R_6_8505001	chr3R_8505001	0.67	RAL-340_100b
1362	chr3R	8548513	8548878	Burdock	6349	6234	40	365	'13-27	67.15	10.1	3.6	intergenic	not near genes	chr3R_40_8545001	chr3R_8545001	0.33	RAL-340_100b
1363	chr3R	8642173	8642316	hobo	2932	169	25	143	'12-13	64.38	9.4	2.4	intergenic	not near genes	chr3R_25_8640001	chr3R_8640001	0.48	RAL-340_100b
1364	chr3R	8659802	8659983	accord	7032	7031	4	181	'3-1	65.07	36.0	0.1	intron	bel -	chr3R_4_8655001	chr3R_8655001	0.75	RAL-340_100b
1365	chr3R	8811107	8811155	P-element	58	28	5	48	'1-4	32.63	18.0	0.3	intron	CG9837 -	chr3R_5_8810001	chr3R_8810001	0.20	RAL-340_100b
1366	chr3R	8811111	8811266	1360	24	3384	51	155	'22-29	66.61	11.1	4.2	intron	CG9837 -	chr3R_51_8810001	chr3R_8810001	0.43	RAL-340_100b
1367	chr3R	8819994	8820102	1360	3326	90	5	108	'3-2	69.70	32.7	0.1	intron,intron	CG9821 -,CR43130 +	chr3R_5_8815001	chr3R_8815001	0.60	RAL-340_100b
1368	chr3R	8872643	8872799	297	39	6635	8	156	'7-1	66.99	7.6	0.9	intron	pyd -	chr3R_8_8870001	chr3R_8870001	0.88	RAL-340_100b
1369	chr3R	9184050	9184276	1360	5	32	68	226	'57-11	68.12	12.3	5.1	intron	pum -	chr3R_68_9180001	chr3R_9180001	0.84	RAL-340_100b
1370	chr3R	9184058	9184104	Tc3	313	317	5	46	'4-1	76.06	14.2	0.3	intron	pum -	chr3R_5_9180001	chr3R_9180001	0.80	RAL-340_100b
1371	chr3R	9278641	9278785	Rt1b	5121	5133	4	144	'2-2	64.14	16.8	0.2	intergenic	not near genes	chr3R_4_9275001	chr3R_9275001	0.50	RAL-340_100b
1372	chr3R	9284033	9284079	Rt1b	356	350	14	46	'2-12	61.48	9.0	1.4	intergenic	not near genes	chr3R_14_9280001	chr3R_9280001	0.14	RAL-340_100b
1373	chr3R	9293202	9293400	297	6581	6857	17	198	'11-6	69.60	6.4	2.3	intergenic	CG8861 -	chr3R_17_9290001	chr3R_9290001	0.65	RAL-340_100b
1374	chr3R	9319201	9319424	hobo	2872	2	31	223	'4-27	63.74	19.3	1.5	intron	CG8861 -	chr3R_31_9315001	chr3R_9315001	0.13	RAL-340_100b
1375	chr3R	9345609	9345809	FB	1	10	73	200	'63-10	66.02	18.8	3.7	intron	CG45050 +	chr3R_73_9345001	chr3R_9345001	0.86	RAL-340_100b
1376	chr3R	9485603	9485833	mdg1	34	37	7	230	'1-6	71.10	18.3	0.4	intron	CG16779 -	chr3R_7_9485001	chr3R_9485001	0.14	RAL-340_100b
1377	chr3R	9815834	9816065	roo	399	10	49	231	'7-42	68.16	11.7	3.9	intergenic	CG16904 -	chr3R_49_9815001	chr3R_9815001	0.14	RAL-340_100b
1378	chr3R	9856539	9856767	Stalker2	392	7328	27	228	'23-4	65.33	10.4	2.4	intron	Teh1 -	chr3R_27_9855001	chr3R_9855001	0.85	RAL-340_100b
1379	chr3R	9967533	9967788	pogo	53	2091	61	255	'8-53	67.77	9.3	5.9	intron	Glut4EF +	chr3R_61_9965001	chr3R_9965001	0.13	RAL-340_100b
1380	chr3R	9988840	9988954	mdg1	48	7087	4	114	'1-3	73.62	23.6	0.2	3` UTR	Glut4EF +	chr3R_4_9985001	chr3R_9985001	0.25	RAL-340_100b
1381	chr3R	10121222	10121559	mdg3	5292	5406	63	337	'34-29	66.75	11.2	5.2	exon	gammaSnap2 -	chr3R_63_10120001	chr3R_10120001	0.54	RAL-340_100b
1382	chr3R	10133208	10133480	I-element	5005	161	4	272	'2-2	61.05	27.1	0.1	intron	tws -	chr3R_4_10130001	chr3R_10130001	0.50	RAL-340_100b
1383	chr3R	10265121	10265421	jockey	4861	4798	53	300	'46-7	65.50	10.8	4.5	intron	CG43143 +	chr3R_53_10265001	chr3R_10265001	0.87	RAL-340_100b
1384	chr3R	10376080	10376445	F-element	446	4632	41	365	'18-23	65.81	12.4	3.1	intron	Rfx -	chr3R_41_10375001	chr3R_10375001	0.44	RAL-340_100b
1385	chr3R	10451710	10451877	F-element	4601	231	4	167	'1-3	57.78	16.9	0.2	intergenic	not near genes	chr3R_4_10450001	chr3R_10450001	0.25	RAL-340_100b
1386	chr3R	10674891	10675147	I-element	5330	5217	5	256	'3-2	72.41	8.1	0.5	intergenic	not near genes	chr3R_5_10670001	chr3R_10670001	0.60	RAL-340_100b
1387	chr3R	10713627	10713822	G2	2773	2788	36	195	'8-28	64.30	12.9	2.6	intergenic	not near genes	chr3R_36_10710001	chr3R_10710001	0.22	RAL-340_100b
1388	chr3R	10778873	10779212	Bari1	68	1638	67	339	'53-14	67.54	10.3	5.9	intergenic	not near genes	chr3R_67_10775001	chr3R_10775001	0.79	RAL-340_100b
1389	chr3R	10845210	10845240	looper1	1815	1814	4	30	'2-2	71.94	27.2	0.1	intron	Cad86C +	chr3R_4_10845001	chr3R_10845001	0.50	RAL-340_100b
1390	chr3R	11003911	11004176	297	39	6900	26	265	'7-19	61.42	9.4	2.5	intron	CG34114 +	chr3R_26_11000001	chr3R_11000001	0.27	RAL-340_100b
1391	chr3R	11061055	11061394	412	7542	7091	53	339	'51-2	65.30	8.7	5.5	intergenic	not near genes	chr3R_53_11060001	chr3R_11060001	0.96	RAL-340_100b
1392	chr3R	11085648	11086044	roo	8751	375	78	396	'45-33	65.30	8.5	8.2	intergenic	CR44940 -	chr3R_78_11085001	chr3R_11085001	0.58	RAL-340_100b
1393	chr3R	11108169	11108267	jockey	4890	4939	4	98	'3-1	67.02	16.9	0.2	intergenic	not near genes	chr3R_4_11105001	chr3R_11105001	0.75	RAL-340_100b
1394	chr3R	11186413	11186645	BS	5018	4726	14	232	'1-13	62.44	10.7	1.2	intergenic	not near genes	chr3R_14_11185001	chr3R_11185001	0.07	RAL-340_100b
1395	chr3R	11197038	11197345	Juan	4115	43	25	307	'16-9	61.35	11.3	2.0	3` UTR	CG18577 +	chr3R_25_11195001	chr3R_11195001	0.64	RAL-340_100b
1396	chr3R	11275862	11276059	accord	157	7014	4	197	'1-3	59.65	34.3	0.1	intron	CR31386 -	chr3R_4_11275001	chr3R_11275001	0.25	RAL-340_100b
1397	chr3R	11278266	11278474	accord	7024	273	7	208	'1-6	52.31	13.8	0.5	intron	CR31386 -	chr3R_7_11275001	chr3R_11275001	0.14	RAL-340_100b
1398	chr3R	11282069	11282477	accord	7032	7014	4	408	'1-3	77.20	22.8	0.2	intron	CR31386 -	chr3R_4_11280001	chr3R_11280001	0.25	RAL-340_100b
1399	chr3R	11449789	11449944	S-element	1706	70	19	155	'14-5	68.88	12.5	1.4	intron,intron	sals -,CG17230 +	chr3R_19_11445001	chr3R_11445001	0.74	RAL-340_100b
1400	chr3R	11461619	11461880	17.6	6956	7197	40	261	'7-33	66.70	16.7	2.3	intron	CG17230 +	chr3R_40_11460001	chr3R_11460001	0.17	RAL-340_100b
1401	chr3R	11501587	11501946	mdg3	5282	5424	89	359	'38-51	63.62	9.1	8.8	intron	dpr5 +	chr3R_89_11500001	chr3R_11500001	0.43	RAL-340_100b
1402	chr3R	11522374	11522731	mdg3	209	5364	54	357	'5-49	65.14	9.9	5.0	intergenic	not near genes	chr3R_54_11520001	chr3R_11520001	0.09	RAL-340_100b
1403	chr3R	11553613	11553686	hopper2	1535	1550	10	73	'2-8	69.15	14.8	0.6	intergenic	not near genes	chr3R_10_11550001	chr3R_11550001	0.20	RAL-340_100b
1404	chr3R	11553635	11553939	hopper	7	27	45	304	'44-1	62.95	15.2	2.8	intergenic	not near genes	chr3R_45_11550001	chr3R_11550001	0.98	RAL-340_100b
1405	chr3R	11689078	11689257	1360	3209	167	82	179	'24-58	68.31	14.1	5.4	intron	CG6908 -	chr3R_82_11685001	chr3R_11685001	0.29	RAL-340_100b
1406	chr3R	11732917	11733129	hobo	97	2934	36	212	'7-29	65.14	12.7	2.6	intergenic	CG12594 +	chr3R_36_11730001	chr3R_11730001	0.19	RAL-340_100b
1407	chr3R	11956955	11956989	S-element	8	1672	4	34	'1-3	72.06	12.3	0.3	intergenic	Hsp70Aa -,Hsp70Ab -	chr3R_4_11955001	chr3R_11955001	0.25	RAL-340_100b
1408	chr3R	12021432	12021653	opus	481	189	26	221	'25-1	60.99	6.1	3.7	intergenic	not near genes	chr3R_26_12020001	chr3R_12020001	0.96	RAL-340_100b
1409	chr3R	12036557	12036819	F-element	340	155	8	262	'2-6	68.07	18.8	0.4	intergenic	not near genes	chr3R_8_12035001	chr3R_12035001	0.25	RAL-340_100b
1410	chr3R	12154894	12155006	F-element	4484	4440	6	112	'1-5	69.11	21.6	0.3	intron	dpr15 -	chr3R_6_12150001	chr3R_12150001	0.17	RAL-340_100b
1411	chr3R	12196848	12197029	jockey	16	4979	25	181	'23-2	65.94	28.1	0.9	intergenic	not near genes	chr3R_25_12195001	chr3R_12195001	0.92	RAL-340_100b
1412	chr3R	12371219	12371527	INE-1	535	565	5	308	'2-3	75.15	21.4	0.2	intergenic	not near genes	chr3R_5_12370001	chr3R_12370001	0.40	RAL-340_100b
1413	chr3R	12383729	12383859	I-element	5335	5336	4	130	'1-3	66.03	12.3	0.3	intron	GstD11 +	chr3R_4_12380001	chr3R_12380001	0.25	RAL-340_100b
1414	chr3R	12468295	12468338	Dm88	4460	4507	5	43	'4-1	73.44	0.0	5.0	intergenic	not near genes	chr3R_5_12465001	chr3R_12465001	0.80	RAL-340_100b
1415	chr3R	12592764	12593039	297	6606	6895	31	275	'4-27	70.07	8.2	3.4	intron	Octbeta2R -	chr3R_31_12590001	chr3R_12590001	0.13	RAL-340_100b
1416	chr3R	12617097	12617286	412	7533	7193	34	189	'15-19	68.11	12.2	2.6	intergenic	not near genes	chr3R_34_12615001	chr3R_12615001	0.44	RAL-340_100b
1417	chr3R	12770170	12770386	Rt1b	180	179	5	216	'2-3	79.25	27.4	0.2	intron	beat-Vc -	chr3R_5_12770001	chr3R_12770001	0.40	RAL-340_100b
1418	chr3R	12799137	12799270	flea	5012	4754	31	133	'11-20	66.92	5.5	4.8	intergenic	not near genes	chr3R_31_12795001	chr3R_12795001	0.35	RAL-340_100b
1419	chr3R	13101787	13102181	297	27	6915	30	394	'5-25	72.48	11.4	2.4	intron	timeout +	chr3R_30_13100001	chr3R_13100001	0.17	RAL-340_100b
1420	chr3R	13389934	13389988	pogo	2058	1954	4	54	'3-1	64.59	9.6	0.4	intron	CCHa2 -	chr3R_4_13385001	chr3R_13385001	0.75	RAL-340_100b
1421	chr3R	13498007	13498188	Quasimodo	38	23	4	181	'3-1	68.75	30.6	0.1	intergenic	not near genes	chr3R_4_13495001	chr3R_13495001	0.75	RAL-340_100b
1422	chr3R	13498060	13498213	accord	183	181	4	153	'1-3	68.55	33.1	0.1	intergenic	not near genes	chr3R_4_13495001	chr3R_13495001	0.25	RAL-340_100b
1423	chr3R	13501108	13501320	jockey	20	4955	17	212	'12-5	56.88	13.4	1.2	intergenic	not near genes	chr3R_17_13500001	chr3R_13500001	0.71	RAL-340_100b
1424	chr3R	13543725	13543971	1360	63	4	69	246	'9-60	63.95	8.6	7.2	intergenic	CG31337 -	chr3R_69_13540001	chr3R_13540001	0.13	RAL-340_100b
1425	chr3R	13647849	13647948	1360	3249	3237	4	99	'2-2	66.18	25.1	0.2	intron	rin +	chr3R_4_13645001	chr3R_13645001	0.50	RAL-340_100b
1426	chr3R	13711930	13712102	S-element	58	148	16	172	'11-5	68.39	12.4	1.2	intergenic	primo-1 -,primo-2 -	chr3R_16_13710001	chr3R_13710001	0.69	RAL-340_100b
1427	chr3R	13761263	13761551	pogo	37	2098	87	288	'8-79	65.34	17.3	4.8	intron	CG34383 +	chr3R_87_13760001	chr3R_13760001	0.09	RAL-340_100b
1428	chr3R	13931350	13931758	Burdock	6354	24	69	408	'30-39	66.42	13.7	4.7	intergenic	not near genes	chr3R_69_13930001	chr3R_13930001	0.43	RAL-340_100b
1429	chr3R	14049231	14049504	transib2	67	2671	52	273	'31-21	65.48	15.0	3.2	intergenic	not near genes	chr3R_52_14045001	chr3R_14045001	0.60	RAL-340_100b
1430	chr3R	14070625	14070832	Doc2-element	217	246	10	207	'9-1	68.94	18.2	0.5	intron	foxo +	chr3R_10_14070001	chr3R_14070001	0.90	RAL-340_100b
1431	chr3R	14145823	14146121	F-element	172	4540	21	298	'2-19	67.07	12.5	1.6	intergenic	not near genes	chr3R_21_14145001	chr3R_14145001	0.10	RAL-340_100b
1432	chr3R	14231163	14231366	G2	2853	3049	6	203	'5-1	69.86	17.3	0.3	intergenic	not near genes	chr3R_6_14230001	chr3R_14230001	0.83	RAL-340_100b
1433	chr3R	14743170	14743319	FB	36	80	16	149	'15-1	57.22	12.0	1.2	intron	jvl +	chr3R_16_14740001	chr3R_14740001	0.94	RAL-340_100b
1434	chr3R	14945170	14945294	roo	8669	407	55	124	'24-31	69.15	9.4	5.3	intergenic	not near genes	chr3R_55_14945001	chr3R_14945001	0.44	RAL-340_100b
1435	chr3R	15036777	15036825	R1A1-element	5114	4962	4	48	'1-3	66.90	33.5	0.1	intergenic	not near genes	chr3R_4_15035001	chr3R_15035001	0.25	RAL-340_100b
1436	chr3R	15068962	15069176	Doc2-element	247	247	4	214	'1-3	76.87	12.3	0.3	intron	dpr9 -	chr3R_4_15065001	chr3R_15065001	0.25	RAL-340_100b
1437	chr3R	15095915	15096245	Transpac	4954	5109	39	330	'2-37	66.39	11.8	3.0	intergenic	CG42788 -,CG6966 -	chr3R_39_15095001	chr3R_15095001	0.05	RAL-340_100b
1438	chr3R	15095917	15095980	F-element	4663	4408	4	63	'1-3	63.79	24.2	0.2	intergenic	CG42788 -,CG6966 -	chr3R_4_15095001	chr3R_15095001	0.25	RAL-340_100b
1439	chr3R	15236362	15236436	17.6	370	7082	4	74	'3-1	70.22	23.7	0.2	exon	tefu -	chr3R_4_15235001	chr3R_15235001	0.75	RAL-340_100b
1440	chr3R	15451153	15451278	blood	54	69	6	125	'5-1	70.23	15.9	0.4	intron	AdamTS-A -	chr3R_6_15450001	chr3R_15450001	0.83	RAL-340_100b
1441	chr3R	15631024	15631228	17.6	408	198	70	204	'39-31	66.17	13.6	4.8	intergenic	not near genes	chr3R_70_15630001	chr3R_15630001	0.56	RAL-340_100b
1442	chr3R	15724212	15724522	copia	4952	255	76	310	'26-50	69.85	8.3	8.2	intergenic	not near genes	chr3R_76_15720001	chr3R_15720001	0.34	RAL-340_100b
1443	chr3R	15771063	15771316	INE-1	402	132	5	253	'2-3	73.80	24.4	0.2	intergenic	not near genes	chr3R_5_15770001	chr3R_15770001	0.40	RAL-340_100b
1444	chr3R	16171963	16172013	Juan	4215	4214	4	50	'2-2	65.19	37.8	0.1	intergenic	CG8925 +,CG6006 +	chr3R_4_16170001	chr3R_16170001	0.50	RAL-340_100b
1445	chr3R	16189246	16189439	invader4	3065	169	7	193	'2-5	66.96	19.0	0.3	intron	sra +	chr3R_7_16185001	chr3R_16185001	0.29	RAL-340_100b
1446	chr3R	16189821	16189989	invader4	199	28	12	168	'7-5	69.29	14.6	0.8	intron	sra +	chr3R_12_16185001	chr3R_16185001	0.58	RAL-340_100b
1447	chr3R	16611516	16611775	Stalker2	406	406	6	259	'2-4	74.08	17.2	0.3	3` UTR	CG12783 -	chr3R_6_16610001	chr3R_16610001	0.33	RAL-340_100b
1448	chr3R	16799792	16799906	X-element	4705	4630	10	114	'8-2	56.04	12.8	0.7	intergenic	not near genes	chr3R_10_16795001	chr3R_16795001	0.80	RAL-340_100b
1449	chr3R	17077965	17078072	Tirant	303	262	41	107	'16-25	66.66	8.2	4.5	intron	Keap1 -	chr3R_41_17075001	chr3R_17075001	0.39	RAL-340_100b
1450	chr3R	17256062	17256098	1360	3234	3238	4	36	'3-1	68.53	44.7	0.1	intron	beat-IIb -	chr3R_4_17255001	chr3R_17255001	0.75	RAL-340_100b
1451	chr3R	17616157	17616527	Burdock	6165	1	82	370	'74-8	67.91	11.2	6.7	intergenic	not near genes	chr3R_82_17615001	chr3R_17615001	0.90	RAL-340_100b
1452	chr3R	17733244	17733319	INE-1	551	27	15	75	'11-4	66.95	8.4	1.6	intergenic	Lgr1 +,CG14321 +	chr3R_15_17730001	chr3R_17730001	0.73	RAL-340_100b
1453	chr3R	17924578	17924835	I-element	87	5344	58	257	'13-45	67.32	13.2	4.1	intron	cpo +	chr3R_58_17920001	chr3R_17920001	0.22	RAL-340_100b
1454	chr3R	17936500	17936755	accord	7032	185	4	255	'1-3	67.67	27.4	0.1	intron	cpo +	chr3R_4_17935001	chr3R_17935001	0.25	RAL-340_100b
1455	chr3R	18112124	18112382	Tirant	204	359	47	258	'44-3	66.12	9.5	4.5	intron	sr +	chr3R_47_18110001	chr3R_18110001	0.94	RAL-340_100b
1456	chr3R	18124566	18124618	mdg1	24	24	7	52	'4-3	66.92	35.5	0.2	intron	sr +	chr3R_7_18120001	chr3R_18120001	0.57	RAL-340_100b
1457	chr3R	18207023	18207449	diver	189	5902	75	426	'25-50	67.67	12.6	5.5	intron	CG7985 +	chr3R_75_18205001	chr3R_18205001	0.33	RAL-340_100b
1458	chr3R	18298034	18298260	Transpac	7	269	33	226	'30-3	67.64	12.2	2.5	intron	l(3)05822 -	chr3R_33_18295001	chr3R_18295001	0.91	RAL-340_100b
1459	chr3R	18377376	18377638	INE-1	134	104	12	262	'4-8	68.21	3.5	2.7	intergenic	not near genes	chr3R_12_18375001	chr3R_18375001	0.33	RAL-340_100b
1460	chr3R	18518529	18518795	jockey	4677	4860	52	266	'2-50	63.99	34.8	1.5	intron	fru -	chr3R_52_18515001	chr3R_18515001	0.04	RAL-340_100b
1461	chr3R	18642743	18643179	roo	401	8683	57	436	'40-17	68.01	9.7	5.3	intron	qin +	chr3R_57_18640001	chr3R_18640001	0.70	RAL-340_100b
1462	chr3R	18722663	18722863	hobo	2937	25	17	200	'8-9	63.74	10.8	1.4	intron	Cha +	chr3R_17_18720001	chr3R_18720001	0.47	RAL-340_100b
1463	chr3R	18784412	18784461	412	3	7103	15	49	'5-10	65.05	18.3	0.8	intron	CG7720 -	chr3R_15_18780001	chr3R_18780001	0.33	RAL-340_100b
1464	chr3R	18809953	18810273	roo	8740	402	65	320	'35-30	67.28	7.8	7.4	intron	CG18208 -	chr3R_65_18805001	chr3R_18805001	0.54	RAL-340_100b
1465	chr3R	18814446	18814799	mdg3	5371	37	51	353	'45-6	63.42	8.7	5.3	intron	CG18208 -	chr3R_51_18810001	chr3R_18810001	0.88	RAL-340_100b
1466	chr3R	18850918	18851090	flea	4975	4756	9	172	'1-8	67.66	6.7	1.2	intergenic	CR45633 -,CG31226 -	chr3R_9_18850001	chr3R_18850001	0.11	RAL-340_100b
1467	chr3R	18860121	18860398	Transpac	244	25	35	277	'3-32	67.92	15.9	2.1	intergenic	not near genes	chr3R_35_18860001	chr3R_18860001	0.09	RAL-340_100b
1468	chr3R	18917211	18917373	S2	133	1436	4	162	'1-3	73.64	12.4	0.3	intron	Xrp1 +	chr3R_4_18915001	chr3R_18915001	0.25	RAL-340_100b
1469	chr3R	18917848	18918027	S2	1602	1683	7	179	'2-5	73.49	13.5	0.5	intron	Xrp1 +	chr3R_7_18915001	chr3R_18915001	0.29	RAL-340_100b
1470	chr3R	19050374	19050791	roo	410	8702	48	417	'5-43	65.53	9.6	4.5	exon	cdi -	chr3R_48_19050001	chr3R_19050001	0.10	RAL-340_100b
1471	chr3R	19137068	19137103	Bari1	138	87	4	35	'2-2	71.86	23.4	0.2	exon	Cyp12a4 +	chr3R_4_19135001	chr3R_19135001	0.50	RAL-340_100b
1472	chr3R	19138873	19139009	Bari1	1520	1657	13	136	'5-8	69.46	15.7	0.8	intergenic	Ppcs -	chr3R_13_19135001	chr3R_19135001	0.38	RAL-340_100b
1473	chr3R	19215365	19215588	opus	2	7392	45	223	'29-16	67.68	9.3	4.4	3` UTR	cry +	chr3R_45_19215001	chr3R_19215001	0.64	RAL-340_100b
1474	chr3R	19440206	19440622	INE-1	95	550	5	416	'3-2	69.96	9.0	0.5	intron	CG31221 +	chr3R_5_19440001	chr3R_19440001	0.60	RAL-340_100b
1475	chr3R	19549123	19549272	FB	969	350	5	149	'2-3	68.45	18.6	0.3	intron	Dys +	chr3R_5_19545001	chr3R_19545001	0.40	RAL-340_100b
1476	chr3R	19773305	19773429	mdg1	49	310	17	124	'8-9	77.13	18.9	0.9	intron	GluClalpha +	chr3R_17_19770001	chr3R_19770001	0.47	RAL-340_100b
1477	chr3R	19777288	19777602	mdg1	20	411	20	314	'13-7	65.79	12.0	1.5	intergenic	CG11659 -	chr3R_20_19775001	chr3R_19775001	0.65	RAL-340_100b
1478	chr3R	19950264	19950355	jockey	4947	4985	6	91	'1-5	76.63	23.9	0.2	intron	Hs6st -	chr3R_6_19950001	chr3R_19950001	0.17	RAL-340_100b
1479	chr3R	20001463	20002040	FB	6	17	6	577	'3-3	65.10	13.0	0.4	intron	Hs6st -	chr3R_6_20000001	chr3R_20000001	0.50	RAL-340_100b
1480	chr3R	20166551	20166713	Ivk	5375	5327	20	162	'7-13	67.55	13.4	1.4	intergenic	not near genes	chr3R_20_20165001	chr3R_20165001	0.35	RAL-340_100b
1481	chr3R	20176038	20176163	roo	8664	403	59	125	'19-40	67.11	19.1	2.9	intergenic	not near genes	chr3R_59_20175001	chr3R_20175001	0.32	RAL-340_100b
1482	chr3R	20180170	20180349	pogo	2100	52	32	179	'22-10	65.09	11.5	2.6	intergenic	not near genes	chr3R_32_20180001	chr3R_20180001	0.69	RAL-340_100b
1483	chr3R	20305730	20305896	mdg1	32	30	10	166	'5-5	42.56	1.4	4.2	intergenic	CG4362 -	chr3R_10_20305001	chr3R_20305001	0.50	RAL-340_100b
1484	chr3R	20343318	20343609	INE-1	547	551	4	291	'2-2	66.48	16.4	0.2	intron	Ir92a +	chr3R_4_20340001	chr3R_20340001	0.50	RAL-340_100b
1485	chr3R	20700337	20700669	roo	120	396	60	332	'56-4	67.53	11.7	4.7	intron	Oamb -	chr3R_60_20700001	chr3R_20700001	0.93	RAL-340_100b
1486	chr3R	21014977	21015339	hopper	65	1389	68	362	'43-25	66.59	8.8	6.9	3` UTR	Calx +	chr3R_68_21010001	chr3R_21010001	0.63	RAL-340_100b
1487	chr3R	21019858	21019997	R1A1-element	42	27	4	139	'2-2	72.31	15.3	0.2	exon	Rlip +	chr3R_4_21015001	chr3R_21015001	0.50	RAL-340_100b
1488	chr3R	21059900	21059976	hopper	204	204	4	76	'3-1	71.29	16.2	0.2	intron	Mvl -	chr3R_4_21055001	chr3R_21055001	0.75	RAL-340_100b
1489	chr3R	21296317	21296693	P-element	99	2809	42	376	'19-23	51.31	8.5	4.4	intergenic	Hsromega +	chr3R_42_21295001	chr3R_21295001	0.45	RAL-340_100b
1490	chr3R	21370930	21371054	FB	757	617	4	124	'2-2	62.66	18.8	0.2	intron	mod(mdg4) -	chr3R_4_21370001	chr3R_21370001	0.50	RAL-340_100b
1491	chr3R	21385342	21385372	pogo	2013	2017	8	30	'6-2	73.75	20.8	0.4	intergenic	not near genes	chr3R_8_21385001	chr3R_21385001	0.75	RAL-340_100b
1492	chr3R	21530751	21530956	accord	182	188	4	205	'2-2	70.77	27.8	0.1	intergenic	CR43372 -	chr3R_4_21530001	chr3R_21530001	0.50	RAL-340_100b
1493	chr3R	21590309	21590635	1360	3164	16	82	326	'80-2	67.61	18.6	4.2	intron	InR -	chr3R_82_21590001	chr3R_21590001	0.98	RAL-340_100b
1494	chr3R	21728391	21728547	Cr1a	4421	4373	4	156	'2-2	69.52	16.6	0.2	intergenic	not near genes	chr3R_4_21725001	chr3R_21725001	0.50	RAL-340_100b
1495	chr3R	21785735	21786018	Circe	192	425	4	283	'1-3	62.43	24.8	0.2	3` UTR,3` UTR	CASK -,CRG -	chr3R_4_21785001	chr3R_21785001	0.25	RAL-340_100b
1496	chr3R	21807164	21807586	mdg3	5316	225	82	422	'77-5	65.14	22.2	3.5	intron	CASK -	chr3R_82_21805001	chr3R_21805001	0.94	RAL-340_100b
1497	chr3R	21862234	21862327	X-element	4703	4341	19	93	'14-5	62.60	12.1	1.5	intergenic	CR45645 -	chr3R_19_21860001	chr3R_21860001	0.74	RAL-340_100b
1498	chr3R	21907293	21907536	G2	102	2801	43	243	'1-42	51.69	27.1	1.5	intergenic	CG6678 +	chr3R_43_21905001	chr3R_21905001	0.02	RAL-340_100b
1499	chr3R	21943325	21943459	F-element	4586	399	26	134	'1-25	60.00	20.4	1.2	intergenic	not near genes	chr3R_26_21940001	chr3R_21940001	0.04	RAL-340_100b
1500	chr3R	21970299	21970408	G2	2908	2860	34	109	'6-28	66.06	15.6	2.0	intron	Eip93F +	chr3R_34_21970001	chr3R_21970001	0.18	RAL-340_100b
1501	chr3R	21993026	21993234	jockey	4987	4942	34	208	'4-30	66.46	15.6	2.0	intron	Eip93F +	chr3R_34_21990001	chr3R_21990001	0.12	RAL-340_100b
1502	chr3R	22234626	22234705	pogo	2019	1907	10	79	'7-3	74.83	15.5	0.6	intron	SKIP +	chr3R_10_22230001	chr3R_22230001	0.70	RAL-340_100b
1503	chr3R	22236040	22236116	pogo	191	12	9	76	'3-6	66.06	22.0	0.4	intron	SKIP +	chr3R_9_22235001	chr3R_22235001	0.33	RAL-340_100b
1504	chr3R	22434300	22434592	Chouto	107	107	4	292	'3-1	73.50	13.1	0.3	intron	CG13847 -	chr3R_4_22430001	chr3R_22430001	0.75	RAL-340_100b
1505	chr3R	22501521	22501789	opus	40	393	31	268	'13-18	66.45	15.4	1.9	intron	Octbeta1R +	chr3R_31_22500001	chr3R_22500001	0.42	RAL-340_100b
1506	chr3R	22816790	22817239	roo	391	19	49	449	'11-38	67.84	11.4	4.0	intergenic	not near genes	chr3R_49_22815001	chr3R_22815001	0.22	RAL-340_100b
1507	chr3R	22915687	22916137	blood	380	15	27	450	'9-18	65.29	8.6	2.8	intron	klg +	chr3R_27_22915001	chr3R_22915001	0.33	RAL-340_100b
1508	chr3R	22988429	22988882	412	7516	3	51	453	'43-8	67.07	9.4	4.9	intron,exon	Nha2 -,Or94a +	chr3R_51_22985001	chr3R_22985001	0.84	RAL-340_100b
1509	chr3R	23074321	23074540	accord	7035	187	4	219	'1-3	73.17	48.3	0.1	intron	CG13830 -	chr3R_4_23070001	chr3R_23070001	0.25	RAL-340_100b
1510	chr3R	23087542	23088033	Stalker2	403	7266	18	491	'14-4	58.97	9.6	1.7	intron	CG13830 -	chr3R_18_23085001	chr3R_23085001	0.78	RAL-340_100b
1511	chr3R	23229340	23229549	X-element	4555	26	16	209	'10-6	65.87	10.6	1.4	3` UTR	CG4467 -	chr3R_16_23225001	chr3R_23225001	0.62	RAL-340_100b
1512	chr3R	23244399	23244626	BS	2	5013	14	227	'11-3	64.62	3.5	3.1	intron	CG4467 -	chr3R_14_23240001	chr3R_23240001	0.79	RAL-340_100b
1513	chr3R	23374835	23375036	accord	187	7056	4	201	'3-1	69.22	28.8	0.1	intergenic	not near genes	chr3R_4_23370001	chr3R_23370001	0.75	RAL-340_100b
1514	chr3R	23499196	23499439	Juan	3928	4060	6	243	'5-1	68.12	15.9	0.4	intergenic	not near genes	chr3R_6_23495001	chr3R_23495001	0.83	RAL-340_100b
1515	chr3R	24004417	24004609	roo	90	273	60	192	'29-31	69.76	12.5	4.4	intron	KrT95D -	chr3R_60_24000001	chr3R_24000001	0.48	RAL-340_100b
1516	chr3R	24054284	24054380	1360	3003	3099	4	96	'2-2	75.94	13.3	0.3	intergenic	CG6000 +,CR44097 +	chr3R_4_24050001	chr3R_24050001	0.50	RAL-340_100b
1517	chr3R	24085821	24085992	accord	184	358	5	171	'3-2	67.13	41.6	0.1	intron	4EHP -	chr3R_5_24085001	chr3R_24085001	0.60	RAL-340_100b
1518	chr3R	24366525	24366710	X-element	4663	4708	23	185	'21-2	62.20	9.1	2.3	intergenic	CG42811 -,CG13613 +	chr3R_23_24365001	chr3R_24365001	0.91	RAL-340_100b
1519	chr3R	24448215	24448512	Burdock	53	6255	35	297	'11-24	70.50	13.1	2.5	intron	nAChRalpha1 -	chr3R_35_24445001	chr3R_24445001	0.31	RAL-340_100b
1520	chr3R	24493581	24493620	jockey	4920	4947	9	39	'4-5	72.79	22.9	0.4	intergenic	not near genes	chr3R_9_24490001	chr3R_24490001	0.44	RAL-340_100b
1521	chr3R	24545414	24545471	F-element	4583	4659	4	57	'1-3	68.72	25.8	0.1	intron	Esyt2 +	chr3R_4_24545001	chr3R_24545001	0.25	RAL-340_100b
1522	chr3R	24684347	24684497	mdg1	7074	37	8	150	'1-7	75.17	17.7	0.4	intron	slo +	chr3R_8_24680001	chr3R_24680001	0.12	RAL-340_100b
1523	chr3R	24790900	24791096	roo	8966	71	46	196	'27-19	66.22	8.6	4.8	intron	Ets96B +	chr3R_46_24790001	chr3R_24790001	0.59	RAL-340_100b
1524	chr3R	25116767	25117264	3S18	6094	5768	53	497	'20-33	66.25	6.1	7.5	intron	CG31108 -	chr3R_53_25115001	chr3R_25115001	0.38	RAL-340_100b
1525	chr3R	25303923	25304096	I-element	5297	4999	10	173	'9-1	67.30	8.3	1.1	3` UTR	CG31370 +	chr3R_10_25300001	chr3R_25300001	0.90	RAL-340_100b
1526	chr3R	25329035	25329388	Doc	337	4503	5	353	'4-1	68.20	14.5	0.3	intron	CHKov1 -	chr3R_5_25325001	chr3R_25325001	0.80	RAL-340_100b
1527	chr3R	25399087	25399366	G2	2853	2879	4	279	'2-2	68.42	93.2	0.0	intron,exon	Fur1 -,Muc96D -	chr3R_4_25395001	chr3R_25395001	0.50	RAL-340_100b
1528	chr3R	25495097	25495267	S-element	32	1694	4	170	'3-1	72.09	14.1	0.3	intron	CG33494 -	chr3R_4_25495001	chr3R_25495001	0.75	RAL-340_100b
1529	chr3R	25495812	25495925	S-element	248	443	4	113	'1-3	67.49	20.4	0.2	intergenic	CR44948 -	chr3R_4_25495001	chr3R_25495001	0.25	RAL-340_100b
1530	chr3R	25897083	25897421	Ivk	5362	95	46	338	'26-20	67.53	10.6	4.0	exon	CG5948 +	chr3R_46_25895001	chr3R_25895001	0.57	RAL-340_100b
1531	chr3R	25933139	25933341	transib1	1900	1902	24	202	'14-10	73.42	9.8	2.2	intron	CCAP-R -	chr3R_24_25930001	chr3R_25930001	0.58	RAL-340_100b
1532	chr3R	26052139	26052368	rover	6825	6824	4	229	'3-1	64.62	25.7	0.1	intron	Exo84 -	chr3R_4_26050001	chr3R_26050001	0.75	RAL-340_100b
1533	chr3R	26168670	26168902	Doc3-element	77	78	5	232	'3-2	57.32	10.4	0.4	intergenic	not near genes	chr3R_5_26165001	chr3R_26165001	0.60	RAL-340_100b
1534	chr3R	26313645	26313956	flea	244	4758	50	311	'5-45	68.42	10.7	4.3	intergenic	not near genes	chr3R_50_26310001	chr3R_26310001	0.10	RAL-340_100b
1535	chr3R	26769255	26769443	jockey	4956	4922	20	188	'18-2	59.60	10.8	1.7	5` UTR	CR45563 +	chr3R_20_26765001	chr3R_26765001	0.90	RAL-340_100b
1536	chr3R	26773956	26774078	hobo	2935	2	47	122	'24-23	65.42	15.2	2.9	intergenic	not near genes	chr3R_47_26770001	chr3R_26770001	0.51	RAL-340_100b
1537	chr3R	26828553	26828733	gypsy3	6576	6573	6	180	'1-5	69.69	19.9	0.3	intron	Tl +	chr3R_6_26825001	chr3R_26825001	0.17	RAL-340_100b
1538	chr3R	26828655	26828812	springer	7292	365	38	157	'14-24	63.69	16.0	2.2	intron	Tl +	chr3R_38_26825001	chr3R_26825001	0.37	RAL-340_100b
1539	chr3R	27063646	27064115	I-element	4992	5299	16	469	'1-15	68.37	13.6	1.1	5` UTR	Nep5 -	chr3R_16_27060001	chr3R_27060001	0.06	RAL-340_100b
1540	chr3R	27108294	27108613	jockey	4654	4989	42	319	'27-15	61.93	12.9	3.0	intergenic	gb -	chr3R_42_27105001	chr3R_27105001	0.64	RAL-340_100b
1541	chr3R	27199564	27199637	Stalker3T	203	201	4	73	'1-3	66.50	13.1	0.3	intergenic	not near genes	chr3R_4_27195001	chr3R_27195001	0.25	RAL-340_100b
1542	chr3R	27281725	27281901	P-element	108	2846	7	176	'1-6	47.85	19.3	0.3	intron	mrt -	chr3R_7_27280001	chr3R_27280001	0.14	RAL-340_100b
1543	chr3R	27288425	27288670	P-element	2	33	61	245	'54-7	47.59	12.4	4.6	exon	bigmax -	chr3R_61_27285001	chr3R_27285001	0.89	RAL-340_100b
1544	chr3R	27301649	27301744	jockey	20	101	6	95	'5-1	62.02	7.3	0.7	intron	CG3339 -	chr3R_6_27300001	chr3R_27300001	0.83	RAL-340_100b
1545	chr3R	27351882	27352037	Juan	114	4051	18	155	'6-12	66.04	11.5	1.4	intron	CG42534 +	chr3R_18_27350001	chr3R_27350001	0.33	RAL-340_100b
1546	chr3R	27374604	27374730	hopper	1009	1411	35	126	'10-25	67.02	14.2	2.3	intergenic	side -	chr3R_35_27370001	chr3R_27370001	0.29	RAL-340_100b
1547	chr3R	27440900	27440970	Idefix	7030	7053	4	70	'2-2	66.88	45.6	0.1	exon	CG44290 -	chr3R_4_27440001	chr3R_27440001	0.50	RAL-340_100b
1548	chr3R	27753285	27753506	jockey	4814	4985	39	221	'3-36	66.43	12.4	2.9	intergenic	not near genes	chr3R_39_27750001	chr3R_27750001	0.08	RAL-340_100b
1549	chr3R	27839248	27839422	accord	6998	7050	4	174	'2-2	70.22	48.2	0.1	intron	CG34353 -	chr3R_4_27835001	chr3R_27835001	0.50	RAL-340_100b
1550	chr3R	27853365	27853654	hopper	20	1341	51	289	'43-8	62.95	16.2	3.0	intron	CG34353 -	chr3R_51_27850001	chr3R_27850001	0.84	RAL-340_100b
1551	chr3R	28061286	28061447	accord	162	7051	4	161	'1-3	64.42	31.1	0.1	intron	CG34362 +	chr3R_4_28060001	chr3R_28060001	0.25	RAL-340_100b
1552	chr3R	28105431	28105694	gypsy12	459	394	4	263	'3-1	72.87	11.5	0.3	intergenic	not near genes	chr3R_4_28105001	chr3R_28105001	0.75	RAL-340_100b
1553	chr3R	28282378	28282568	pogo	2096	56	33	190	'25-8	68.65	10.7	2.8	intergenic	CG34436 +	chr3R_33_28280001	chr3R_28280001	0.76	RAL-340_100b
1554	chr3R	28336471	28336720	transib1	245	245	5	249	'3-2	53.51	13.5	0.3	intergenic	larp -	chr3R_5_28335001	chr3R_28335001	0.60	RAL-340_100b
1555	chr3R	28453569	28453751	flea	236	4756	7	182	'2-5	65.30	14.9	0.4	intron	beat-VI +	chr3R_7_28450001	chr3R_28450001	0.29	RAL-340_100b
1556	chr3R	28474427	28474688	opus	459	113	41	261	'7-34	68.13	18.0	2.2	3` UTR	beat-VI +	chr3R_41_28470001	chr3R_28470001	0.17	RAL-340_100b
1557	chr3R	28607912	28608139	Idefix	7383	31	12	227	'5-7	69.78	11.8	0.9	3` UTR	CG9986 +	chr3R_12_28605001	chr3R_28605001	0.42	RAL-340_100b
1558	chr3R	28636011	28636360	INE-1	76	499	5	349	'3-2	75.19	18.2	0.3	intergenic	CG9988 +	chr3R_5_28635001	chr3R_28635001	0.60	RAL-340_100b
1559	chr3R	28668175	28668365	Rt1b	5129	5081	33	190	'3-30	66.56	10.7	2.8	intergenic	not near genes	chr3R_33_28665001	chr3R_28665001	0.09	RAL-340_100b
1560	chr3R	28773344	28773554	accord	6966	180	4	210	'2-2	64.11	55.4	0.1	intergenic	not near genes	chr3R_4_28770001	chr3R_28770001	0.50	RAL-340_100b
1561	chr3R	28973750	28973857	Quasimodo	7243	6978	4	107	'3-1	70.31	22.8	0.2	intergenic	not near genes	chr3R_4_28970001	chr3R_28970001	0.75	RAL-340_100b
1562	chr3R	29025893	29026026	S-element	376	314	6	133	'5-1	78.29	17.2	0.3	intron	CG14518 +	chr3R_6_29025001	chr3R_29025001	0.83	RAL-340_100b
1563	chr3R	29078181	29078274	roo	25	7	5	93	'3-2	69.18	24.3	0.2	intron	CG11873 +	chr3R_5_29075001	chr3R_29075001	0.60	RAL-340_100b
1564	chr3R	29207473	29207549	Doc	46	151	28	76	'17-11	62.69	17.8	1.5	intergenic	not near genes	chr3R_28_29205001	chr3R_29205001	0.61	RAL-340_100b
1565	chr3R	29338613	29338755	Idefix	7389	7	5	142	'2-3	65.03	11.4	0.4	intergenic	not near genes	chr3R_5_29335001	chr3R_29335001	0.40	RAL-340_100b
1566	chr3R	29401300	29401798	accord	7056	7009	4	498	'3-1	59.40	29.8	0.1	intron	Ptp99A +	chr3R_4_29400001	chr3R_29400001	0.75	RAL-340_100b
1567	chr3R	29408709	29408977	I-element	5038	5165	4	268	'3-1	69.56	16.0	0.2	intron	Ptp99A +	chr3R_4_29405001	chr3R_29405001	0.75	RAL-340_100b
1568	chr3R	29426026	29426148	accord	142	188	5	122	'3-2	60.83	44.6	0.1	intron	Ptp99A +	chr3R_5_29425001	chr3R_29425001	0.60	RAL-340_100b
1569	chr3R	29457249	29457454	hobo	87	2931	30	205	'5-25	68.97	10.4	2.6	intron	Ptp99A +	chr3R_30_29455001	chr3R_29455001	0.17	RAL-340_100b
1570	chr3R	29534585	29534665	Stalker4	92	6883	7	80	'1-6	62.23	5.8	1.0	intergenic	CR43613 +	chr3R_7_29530001	chr3R_29530001	0.14	RAL-340_100b
1571	chr3R	29692997	29693346	I-element	5347	27	74	349	'11-63	61.71	23.9	3.0	intron	dmrt99B +	chr3R_74_29690001	chr3R_29690001	0.15	RAL-340_100b
1572	chr3R	29786465	29786851	Doc	153	4697	37	386	'33-4	65.69	7.7	4.3	intron	kay +	chr3R_37_29785001	chr3R_29785001	0.89	RAL-340_100b
1573	chr3R	30098292	30098345	accord	7063	214	4	53	'3-1	70.41	64.7	0.1	intron	sima +	chr3R_4_30095001	chr3R_30095001	0.75	RAL-340_100b
1574	chr3R	30194123	30194397	412	411	7146	34	274	'23-11	67.96	3.5	7.6	intergenic	not near genes	chr3R_34_30190001	chr3R_30190001	0.68	RAL-340_100b
1575	chr3R	30213255	30213320	Tc3	1574	1571	4	65	'1-3	57.51	5.7	0.6	intergenic	CecB -	chr3R_4_30210001	chr3R_30210001	0.25	RAL-340_100b
1576	chr3R	30240953	30241098	Idefix	7360	109	5	145	'1-4	65.94	12.4	0.4	intergenic	CG9737 -	chr3R_5_30240001	chr3R_30240001	0.20	RAL-340_100b
1577	chr3R	30386727	30387117	P-element	2820	2885	145	390	'82-63	45.67	9.6	13.7	intron	Fer1HCH -	chr3R_145_30385001	chr3R_30385001	0.57	RAL-340_100b
1578	chr3R	30480416	30480491	jockey	4862	4856	14	75	'6-8	70.86	25.1	0.5	intron	PH4alphaEFB +	chr3R_14_30480001	chr3R_30480001	0.43	RAL-340_100b
1579	chr3R	30624972	30625050	mdg1	7076	7081	5	78	'4-1	72.34	18.8	0.3	3` UTR	CR44136 -	chr3R_5_30620001	chr3R_30620001	0.80	RAL-340_100b
1580	chr3R	30648785	30648989	opus	398	2	34	204	'8-26	73.17	11.8	2.7	intergenic	PH4alphaPV -,CG34432 +	chr3R_34_30645001	chr3R_30645001	0.24	RAL-340_100b
1581	chr3R	30820414	30820565	1360	3275	3387	5	151	'4-1	68.81	28.2	0.2	intron	cindr +	chr3R_5_30820001	chr3R_30820001	0.80	RAL-340_100b
1582	chr3R	30833870	30834158	roo	357	38	72	288	'45-27	66.25	12.2	5.5	intron	CG15544 +	chr3R_72_30830001	chr3R_30830001	0.62	RAL-340_100b
1583	chr3R	31045707	31046004	INE-1	86	88	7	297	'4-3	69.23	8.1	0.8	intron	CanA1 +	chr3R_7_31045001	chr3R_31045001	0.57	RAL-340_100b
1584	chr3R	31115156	31115198	Doc	4	46	16	42	'6-10	64.60	4.0	3.2	intergenic	not near genes	chr3R_16_31115001	chr3R_31115001	0.38	RAL-340_100b
1585	chr3R	31458412	31458482	jockey	134	8	20	70	'13-7	66.76	20.2	0.9	3` UTR	lox -	chr3R_20_31455001	chr3R_31455001	0.65	RAL-340_100b
1586	chr3R	31667874	31668053	accord	7005	7026	4	179	'1-3	68.89	36.8	0.1	intergenic	not near genes	chr3R_4_31665001	chr3R_31665001	0.25	RAL-340_100b
1587	chr3R	31887615	31887726	HB	1576	1584	4	111	'1-3	60.42	16.7	0.2	intron	heph -	chr3R_4_31885001	chr3R_31885001	0.25	RAL-340_100b
1588	chr3R	31928742	31928779	BS	5054	5081	11	37	'9-2	65.66	9.3	1.1	intron	heph -	chr3R_11_31925001	chr3R_31925001	0.82	RAL-340_100b
1589	chr3R	31968543	31968687	INE-1	556	544	7	144	'3-4	74.65	21.9	0.3	intron	heph -	chr3R_7_31965001	chr3R_31965001	0.43	RAL-340_100b
1590	chr3R	32059606	32060171	INE-1	11	574	6	565	'2-4	68.58	13.6	0.4	intron	Map205 -	chr3R_6_32055001	chr3R_32055001	0.33	RAL-340_100b
1591	chr3R	32062433	32062583	Ivk	5365	5368	7	150	'5-2	52.83	13.8	0.5	intron	Map205 -	chr3R_7_32060001	chr3R_32060001	0.71	RAL-340_100b
1592	chr4	54498	54756	INE-1	503	466	5	258	'2-3	66.62	10.5	0.4	intron	ci -	chr4_5_50001	chr4_50001	0.40	RAL-340_100b
1593	chr4	71398	71485	INE-1	126	551	15	87	'1-14	75.27	16.9	0.8	intron	pan +	chr4_15_70001	chr4_70001	0.07	RAL-340_100b
1594	chr4	99884	99934	INE-1	577	499	4	50	'1-3	75.13	24.4	0.2	intron	pan +	chr4_4_95001	chr4_95001	0.25	RAL-340_100b
1595	chr4	119484	119557	1360	3261	3209	7	73	'5-2	70.78	21.7	0.3	intron	Ank -	chr4_7_115001	chr4_115001	0.71	RAL-340_100b
1596	chr4	119860	120016	1360	3348	3358	4	156	'1-3	67.95	17.2	0.2	intron	Ank -	chr4_4_115001	chr4_115001	0.25	RAL-340_100b
1597	chr4	158192	158301	1360	317	3	13	109	'12-1	70.65	25.0	0.5	3` UTR	CG33978 -	chr4_13_155001	chr4_155001	0.92	RAL-340_100b
1598	chr4	202880	203007	1360	58	265	8	127	'6-2	71.13	18.7	0.4	intron	CG31998 -	chr4_8_200001	chr4_200001	0.75	RAL-340_100b
1599	chr4	221332	221398	Tc1-2	164	200	11	66	'8-3	67.80	19.1	0.5	intron	CG31999 -	chr4_11_220001	chr4_220001	0.73	RAL-340_100b
1600	chr4	295738	295771	1360	3340	178	5	33	'3-2	71.73	37.9	0.1	intron	Syt7 -	chr4_5_295001	chr4_295001	0.60	RAL-340_100b
1601	chr4	296936	297067	transib3	58	112	4	131	'3-1	64.50	17.1	0.2	intron	Syt7 -	chr4_4_295001	chr4_295001	0.75	RAL-340_100b
1602	chr4	299295	299408	transib3	2703	8	11	113	'5-6	69.48	12.9	0.8	intron	Syt7 -	chr4_11_295001	chr4_295001	0.45	RAL-340_100b
1603	chr4	303816	303880	1360	3259	3300	12	64	'9-3	69.08	36.6	0.3	intron	Syt7 -	chr4_12_300001	chr4_300001	0.75	RAL-340_100b
1604	chr4	306384	306559	1360	3385	80	5	175	'2-3	67.62	15.4	0.3	intron	Syt7 -	chr4_5_305001	chr4_305001	0.40	RAL-340_100b
1605	chr4	307737	307850	1360	57	3274	6	113	'4-2	73.12	14.3	0.4	intergenic	Rad23 +	chr4_6_305001	chr4_305001	0.67	RAL-340_100b
1606	chr4	311372	311412	1360	251	38	5	40	'3-2	72.58	31.7	0.2	3` UTR	Zip102B -	chr4_5_310001	chr4_310001	0.60	RAL-340_100b
1607	chr4	318047	318196	1360	3301	56	5	149	'1-4	69.28	14.0	0.3	intron	CG32850 +	chr4_5_315001	chr4_315001	0.20	RAL-340_100b
1608	chr4	319338	319457	1360	68	47	6	119	'3-3	74.42	18.3	0.3	intron	CG32850 +	chr4_6_315001	chr4_315001	0.50	RAL-340_100b
1609	chr4	347733	347847	Tc1-2	218	40	7	114	'3-4	67.55	23.2	0.3	intron	PMCA -	chr4_7_345001	chr4_345001	0.43	RAL-340_100b
1610	chr4	361235	361388	INE-1	556	545	5	153	'3-2	68.73	15.8	0.3	intron	Hcf +	chr4_5_360001	chr4_360001	0.60	RAL-340_100b
1611	chr4	371009	371198	1360	46	3387	5	189	'4-1	73.26	15.8	0.3	intron	Hcf +	chr4_5_370001	chr4_370001	0.80	RAL-340_100b
1612	chr4	453945	454041	1360	58	3334	4	96	'2-2	76.10	19.8	0.2	3` UTR	CaMKI +	chr4_4_450001	chr4_450001	0.50	RAL-340_100b
1613	chr4	491352	491613	INE-1	533	175	4	261	'2-2	67.82	12.1	0.3	intergenic	not near genes	chr4_4_490001	chr4_490001	0.50	RAL-340_100b
1614	chr4	511254	511597	1360	3372	49	4	343	'2-2	71.46	9.5	0.4	intron	zfh2 +	chr4_4_510001	chr4_510001	0.50	RAL-340_100b
1615	chr4	560738	560857	FB	47	158	7	119	'5-2	71.08	14.8	0.4	exon	Pur-alpha +	chr4_7_560001	chr4_560001	0.71	RAL-340_100b
1616	chr4	562928	563052	FB	986	99	8	124	'6-2	72.10	11.8	0.6	intron	Pur-alpha +	chr4_8_560001	chr4_560001	0.75	RAL-340_100b
1617	chr4	608715	609111	INE-1	142	136	4	396	'2-2	72.66	15.9	0.2	intergenic	not near genes	chr4_4_605001	chr4_605001	0.50	RAL-340_100b
1618	chr4	622513	622585	INE-1	90	158	4	72	'3-1	72.28	27.6	0.1	intergenic	Eph +	chr4_4_620001	chr4_620001	0.75	RAL-340_100b
1619	chr4	628208	628237	gypsy9	5278	5251	4	29	'1-3	73.50	21.5	0.2	intergenic	not near genes	chr4_4_625001	chr4_625001	0.25	RAL-340_100b
1620	chr4	628940	629296	INE-1	83	158	5	356	'2-3	66.45	16.8	0.3	intergenic	not near genes	chr4_5_625001	chr4_625001	0.40	RAL-340_100b
1621	chr4	647276	647436	mariner2	9	147	10	160	'5-5	71.34	16.4	0.6	intergenic	not near genes	chr4_10_645001	chr4_645001	0.50	RAL-340_100b
1622	chr4	648285	648313	mariner2	694	651	4	28	'2-2	67.73	39.2	0.1	intergenic	not near genes	chr4_4_645001	chr4_645001	0.50	RAL-340_100b
1623	chr4	716518	716555	INE-1	571	533	4	37	'1-3	63.63	21.7	0.2	intron	ey +	chr4_4_715001	chr4_715001	0.25	RAL-340_100b
1624	chr4	772967	773114	Tc1	17	97	17	147	'4-13	71.61	17.4	0.9	intron	bt +	chr4_17_770001	chr4_770001	0.24	RAL-340_100b
1625	chr4	773824	773988	Tc1	1446	1609	21	164	'7-14	68.52	15.2	1.3	intron	bt +	chr4_21_770001	chr4_770001	0.33	RAL-340_100b
1626	chr4	782761	782819	1360	3376	11	4	58	'2-2	62.47	22.0	0.2	intron	MED26 -	chr4_4_780001	chr4_780001	0.50	RAL-340_100b
1627	chr4	788820	788891	1360	3271	3238	6	71	'2-4	64.73	14.5	0.4	intron	MED26 -	chr4_6_785001	chr4_785001	0.33	RAL-340_100b
1628	chr4	805322	805501	Tc1-2	1405	1569	8	179	'3-5	66.51	7.2	1.0	intron	Sox102F -	chr4_8_805001	chr4_805001	0.38	RAL-340_100b
1629	chr4	829447	829500	INE-1	80	169	6	53	'5-1	70.78	38.9	0.2	intron	Sox102F -	chr4_6_825001	chr4_825001	0.83	RAL-340_100b
1630	chr4	836649	836817	INE-1	129	542	7	168	'6-1	76.57	37.7	0.2	intergenic	fd102C -	chr4_7_835001	chr4_835001	0.86	RAL-340_100b
1631	chr4	872470	872518	1360	3378	3157	4	48	'1-3	64.09	24.8	0.2	intron	unc-13 -	chr4_4_870001	chr4_870001	0.25	RAL-340_100b
1632	chr4	894493	894602	Bari2	953	847	4	109	'1-3	67.25	11.1	0.3	intron	unc-13 -	chr4_4_890001	chr4_890001	0.25	RAL-340_100b
1633	chr4	897245	897551	INE-1	162	251	8	306	'6-2	69.29	10.2	0.7	intron	unc-13 -	chr4_8_895001	chr4_895001	0.75	RAL-340_100b
1634	chr4	905963	905998	transib3	2569	2512	4	35	'3-1	76.19	39.3	0.1	5` UTR	unc-13 -	chr4_4_905001	chr4_905001	0.75	RAL-340_100b
1635	chr4	909011	909131	1360	3190	3332	6	120	'3-3	73.02	18.3	0.3	intron	unc-13 -	chr4_6_905001	chr4_905001	0.50	RAL-340_100b
1636	chr4	909823	909932	invader1	3882	3866	4	109	'2-2	63.97	12.9	0.3	intron	unc-13 -	chr4_4_905001	chr4_905001	0.50	RAL-340_100b
1637	chr4	921945	922025	INE-1	117	31	6	80	'5-1	70.25	22.5	0.3	intron	eIF4G -	chr4_6_920001	chr4_920001	0.83	RAL-340_100b
1638	chr4	935682	935771	1360	3189	19	5	89	'3-2	73.64	27.9	0.2	intergenic	not near genes	chr4_5_935001	chr4_935001	0.60	RAL-340_100b
1639	chr4	937544	937613	INE-1	80	31	4	69	'3-1	64.82	17.6	0.2	intron	mGluR +	chr4_4_935001	chr4_935001	0.75	RAL-340_100b
1640	chr4	949671	949749	INE-1	561	545	5	78	'2-3	73.47	17.8	0.3	intergenic	mGluR +	chr4_5_945001	chr4_945001	0.40	RAL-340_100b
1641	chr4	951209	951401	Tc1	227	72	5	192	'2-3	56.86	13.2	0.4	intergenic	4E-T -	chr4_5_950001	chr4_950001	0.40	RAL-340_100b
1642	chr4	956418	956539	INE-1	151	132	4	121	'1-3	72.62	19.4	0.2	intron	4E-T -	chr4_4_955001	chr4_955001	0.25	RAL-340_100b
1643	chr4	968546	968732	Tc1-2	32	182	11	186	'3-8	68.55	13.6	0.8	intron	fuss -	chr4_11_965001	chr4_965001	0.27	RAL-340_100b
1644	chr4	976336	976564	S-element	1534	1390	4	228	'2-2	57.77	14.3	0.3	intron,intron	fuss -,sphinx +	chr4_4_975001	chr4_975001	0.50	RAL-340_100b
1645	chr4	987532	987910	INE-1	532	344	4	378	'3-1	72.06	14.1	0.3	intergenic	not near genes	chr4_4_985001	chr4_985001	0.75	RAL-340_100b
1646	chr4	1025129	1025229	Tc1	85	173	5	100	'4-1	75.19	17.9	0.3	intron	PlexA -	chr4_5_1025001	chr4_1025001	0.80	RAL-340_100b
1647	chr4	1039813	1039983	INE-1	531	545	4	170	'1-3	65.38	19.7	0.2	intron	CaMKII -	chr4_4_1035001	chr4_1035001	0.25	RAL-340_100b
1648	chr4	1045162	1045292	Tc1	7	102	22	130	'4-18	69.42	15.8	1.3	exon	CaMKII -	chr4_22_1045001	chr4_1045001	0.18	RAL-340_100b
1649	chr4	1084096	1084137	mariner2	849	775	4	41	'2-2	65.37	16.6	0.2	intron	Actbeta -	chr4_4_1080001	chr4_1080001	0.50	RAL-340_100b
1650	chr4	1090278	1090315	INE-1	548	570	4	37	'2-2	71.06	25.7	0.1	intron	sv +	chr4_4_1090001	chr4_1090001	0.50	RAL-340_100b
1651	chr4	1109781	1109988	INE-1	574	548	6	207	'3-3	72.15	16.3	0.3	intron	sv +	chr4_6_1105001	chr4_1105001	0.50	RAL-340_100b
1652	chr4	1114980	1115046	INE-1	20	124	4	66	'2-2	72.41	15.7	0.2	3` UTR	Cals -	chr4_4_1110001	chr4_1110001	0.50	RAL-340_100b
1653	chr4	1120636	1120741	INE-1	577	500	4	105	'1-3	67.26	14.1	0.3	intron	Cals -	chr4_4_1120001	chr4_1120001	0.25	RAL-340_100b
1654	chr4	1155795	1155953	Doc3-element	135	32	8	158	'5-3	68.69	19.4	0.4	intron,intron	CG32017 -,Kif3C +	chr4_8_1155001	chr4_1155001	0.62	RAL-340_100b
1655	chr4	1167627	1167747	1360	158	90	7	120	'4-3	66.91	15.0	0.4	3` UTR	Kif3C +	chr4_7_1165001	chr4_1165001	0.57	RAL-340_100b
1656	chr4	1168914	1169105	1360	44	3353	10	191	'4-6	68.50	13.6	0.7	3` UTR	Kif3C +	chr4_10_1165001	chr4_1165001	0.40	RAL-340_100b
1657	chr4	1175238	1175338	jockey2	3362	3267	7	100	'3-4	76.43	16.9	0.4	intron	pho -	chr4_7_1175001	chr4_1175001	0.43	RAL-340_100b
1658	chr4	1194047	1194247	1360	404	499	4	200	'1-3	67.19	9.5	0.4	intron	PIP4K -	chr4_4_1190001	chr4_1190001	0.25	RAL-340_100b
1659	chr4	1250432	1250544	INE-1	535	579	4	112	'3-1	64.31	15.6	0.2	intron	Caps +	chr4_4_1250001	chr4_1250001	0.75	RAL-340_100b
1660	chrX	123818	124358	INE-1	34	31	13	540	'11-2	73.65	17.8	0.7	intergenic	not near genes	chrX_13_120001	chrX_120001	0.85	RAL-340_100b
1661	chrX	160205	160241	Cr1a	4294	4307	7	36	'3-4	65.85	36.6	0.2	intron	tyn +	chrX_7_160001	chrX_160001	0.43	RAL-340_100b
1662	chrX	293018	293138	G3	4369	4289	6	120	'2-4	68.72	10.3	0.5	intron,intron	CG3777 +,CG13375 -	chrX_6_290001	chrX_290001	0.33	RAL-340_100b
1663	chrX	314527	314797	297	395	6606	43	270	'39-4	71.28	8.3	4.6	intron	CG3777 +	chrX_43_310001	chrX_310001	0.91	RAL-340_100b
1664	chrX	341314	341476	S-element	1611	1701	20	162	'11-9	67.00	9.0	2.0	intron,intron	CG3777 +,CG32816 -	chrX_20_340001	chrX_340001	0.55	RAL-340_100b
1665	chrX	361845	362000	FB	250	945	9	155	'1-8	73.19	13.3	0.6	intron	CG32816 -	chrX_9_360001	chrX_360001	0.11	RAL-340_100b
1666	chrX	456566	456635	Idefix	7360	7188	5	69	'1-4	73.20	24.1	0.2	intron	CG32816 -	chrX_5_455001	chrX_455001	0.20	RAL-340_100b
1667	chrX	519513	519901	roo	41	9043	80	388	'60-20	69.61	16.0	4.7	intron,intron	elav -,arg +	chrX_80_515001	chrX_515001	0.75	RAL-340_100b
1668	chrX	551354	551455	roo	1	9043	42	101	'26-16	69.51	6.8	5.4	intron	Appl +	chrX_42_550001	chrX_550001	0.62	RAL-340_100b
1669	chrX	711718	712030	297	6588	6963	27	312	'26-1	66.04	13.1	1.9	intron	sdk +	chrX_27_710001	chrX_710001	0.96	RAL-340_100b
1670	chrX	769948	770022	P-element	10	2853	5	74	'2-3	45.16	26.4	0.2	5` UTR	fz3 +	chrX_5_765001	chrX_765001	0.40	RAL-340_100b
1671	chrX	1017847	1018289	1360	237	250	10	442	'5-5	72.22	15.6	0.6	intron,intron	su(w[a]) +,CG11638 -	chrX_10_1015001	chrX_1015001	0.50	RAL-340_100b
1672	chrX	1367988	1368099	Ivk	177	99	6	111	'2-4	72.29	17.5	0.3	intergenic	not near genes	chrX_6_1365001	chrX_1365001	0.33	RAL-340_100b
1673	chrX	1602823	1603204	F-element	4430	4473	4	381	'1-3	73.51	19.7	0.2	intron,intron	Mur2B -,br +	chrX_4_1600001	chrX_1600001	0.25	RAL-340_100b
1674	chrX	1729093	1729311	roo	409	1	52	218	'10-42	68.66	10.3	4.6	intergenic	not near genes	chrX_52_1725001	chrX_1725001	0.19	RAL-340_100b
1675	chrX	1762862	1762897	jockey	4921	4928	7	35	'4-3	70.58	23.4	0.3	intergenic	not near genes	chrX_7_1760001	chrX_1760001	0.57	RAL-340_100b
1676	chrX	1819036	1819114	INE-1	162	163	4	78	'1-3	75.56	29.9	0.1	intron	CG42666 +	chrX_4_1815001	chrX_1815001	0.25	RAL-340_100b
1677	chrX	1837739	1837838	mdg1	43	39	4	99	'3-1	66.87	26.9	0.1	intron	CG42666 +	chrX_4_1835001	chrX_1835001	0.75	RAL-340_100b
1678	chrX	1975330	1975642	roo	8670	9038	80	312	'73-7	66.10	13.1	5.7	intron	Hr4 +	chrX_80_1975001	chrX_1975001	0.91	RAL-340_100b
1679	chrX	2302244	2302602	P-element	12	2746	28	358	'1-27	42.85	14.0	1.9	intron	phl +	chrX_28_2300001	chrX_2300001	0.04	RAL-340_100b
1680	chrX	2305177	2305243	mdg1	19	21	4	66	'1-3	59.73	41.1	0.1	intron	phl +	chrX_4_2305001	chrX_2305001	0.25	RAL-340_100b
1681	chrX	2318282	2318557	F-element	4358	315	5	275	'4-1	62.74	18.2	0.3	intron	phl +	chrX_5_2315001	chrX_2315001	0.80	RAL-340_100b
1682	chrX	2561293	2561707	mdg3	243	35	32	414	'26-6	67.51	10.7	2.7	intron	Pdfr +	chrX_32_2560001	chrX_2560001	0.81	RAL-340_100b
1683	chrX	2661296	2661571	accord	259	7029	4	275	'1-3	69.08	10.0	0.4	intron	sgg +	chrX_4_2660001	chrX_2660001	0.25	RAL-340_100b
1684	chrX	2781008	2781319	FB	30	2	74	311	'2-72	63.76	10.6	6.4	intron	kirre +	chrX_74_2780001	chrX_2780001	0.03	RAL-340_100b
1685	chrX	2932333	2932512	R1A1-element	337	334	6	179	'5-1	67.94	15.9	0.4	intron,exon	kirre +,CG32793 +	chrX_6_2930001	chrX_2930001	0.83	RAL-340_100b
1686	chrX	3080949	3081092	gypsy7	5004	5004	4	143	'3-1	64.75	7.5	0.5	intron	kirre +	chrX_4_3080001	chrX_3080001	0.75	RAL-340_100b
1687	chrX	3125572	3125621	Doc2-element	229	240	4	49	'1-3	59.94	34.4	0.1	intron	kirre +	chrX_4_3125001	chrX_3125001	0.25	RAL-340_100b
1688	chrX	3235741	3235966	INE-1	551	549	11	225	'10-1	67.46	41.2	0.3	intron	dnc +	chrX_11_3235001	chrX_3235001	0.91	RAL-340_100b
1689	chrX	3299599	3299801	hobo	103	2710	27	202	'6-21	68.87	8.7	2.8	intron	dnc +	chrX_27_3295001	chrX_3295001	0.22	RAL-340_100b
1690	chrX	3404114	3404444	S2	1554	1539	4	330	'3-1	73.62	7.9	0.4	intron,intron	CR44999 +,CG12535 -	chrX_4_3400001	chrX_3400001	0.75	RAL-340_100b
1691	chrX	3404543	3404692	blood	306	7008	36	149	'26-10	67.07	7.6	4.2	intron,intron	CR44999 +,CG12535 -	chrX_36_3400001	chrX_3400001	0.72	RAL-340_100b
1692	chrX	3428611	3428949	gypsy	65	7091	6	338	'5-1	60.19	3.3	1.4	intron,intron	CR44999 +,CG12535 -	chrX_6_3425001	chrX_3425001	0.83	RAL-340_100b
1693	chrX	3448892	3448942	mdg1	27	7082	4	50	'2-2	72.91	30.7	0.1	intron,intron	CR44999 +,CG12535 -	chrX_4_3445001	chrX_3445001	0.50	RAL-340_100b
1694	chrX	3464105	3464227	hopper	1343	1284	4	122	'2-2	71.47	9.1	0.4	intron	CR44999 +	chrX_4_3460001	chrX_3460001	0.50	RAL-340_100b
1695	chrX	3481371	3481552	S-element	1707	87	20	181	'14-6	68.22	7.5	2.4	intron,intron	CR44999 +,CG10804 -	chrX_20_3480001	chrX_3480001	0.70	RAL-340_100b
1696	chrX	3656993	3657243	Bari1	1661	4	31	250	'4-27	65.55	8.0	3.4	intron	AstA-R1 +	chrX_31_3655001	chrX_3655001	0.13	RAL-340_100b
1697	chrX	3696019	3696156	jockey	4833	4895	48	137	'17-31	67.98	16.8	2.7	intron	Mnt +	chrX_48_3695001	chrX_3695001	0.35	RAL-340_100b
1698	chrX	3703664	3703988	1360	3323	3365	18	324	'17-1	73.42	9.5	1.7	intergenic	CR45102 +	chrX_18_3700001	chrX_3700001	0.94	RAL-340_100b
1699	chrX	3842279	3842731	pogo	3	2038	7	452	'2-5	71.71	10.2	0.6	intron	ec +	chrX_7_3840001	chrX_3840001	0.29	RAL-340_100b
1700	chrX	3856905	3857011	Max-element	8263	8532	65	106	'27-38	65.11	19.7	3.1	3` UTR	ec +	chrX_65_3855001	chrX_3855001	0.42	RAL-340_100b
1701	chrX	4110894	4111215	1360	11	3	21	321	'17-4	68.31	14.8	1.3	intergenic	cib +,Nsun2 -	chrX_21_4110001	chrX_4110001	0.81	RAL-340_100b
1702	chrX	4128607	4128781	INE-1	567	566	6	174	'3-3	67.84	23.1	0.2	3` UTR	tyf +	chrX_6_4125001	chrX_4125001	0.50	RAL-340_100b
1703	chrX	4652231	4652396	G2	2868	2841	4	165	'2-2	61.49	25.5	0.2	intron,exon	Cbp80 +,CG15473 -	chrX_4_4650001	chrX_4650001	0.50	RAL-340_100b
1704	chrX	4677812	4678058	S-element	1606	67	26	246	'18-8	65.79	7.7	3.0	intron	rap -	chrX_26_4675001	chrX_4675001	0.69	RAL-340_100b
1705	chrX	4758802	4758911	Cr1a	24	25	5	109	'1-4	67.50	14.2	0.3	intergenic	not near genes	chrX_5_4755001	chrX_4755001	0.20	RAL-340_100b
1706	chrX	4792895	4793125	jockey	4942	4945	40	230	'38-2	63.76	17.6	2.2	intergenic	not near genes	chrX_40_4790001	chrX_4790001	0.95	RAL-340_100b
1707	chrX	4889866	4890002	1360	221	210	5	136	'4-1	68.47	14.3	0.3	intron	CG42594 +	chrX_5_4885001	chrX_4885001	0.80	RAL-340_100b
1708	chrX	5034715	5034922	mdg1	18	7067	6	207	'1-5	76.84	11.5	0.5	intron	CR44833 -	chrX_6_5030001	chrX_5030001	0.17	RAL-340_100b
1709	chrX	5593865	5594185	P-element	4	5	33	320	'1-32	50.60	21.5	1.5	intergenic	Vsx1 +	chrX_33_5590001	chrX_5590001	0.03	RAL-340_100b
1710	chrX	5638579	5638782	pogo	2048	2095	55	203	'8-47	65.35	21.7	2.4	intron	CG42492 -	chrX_55_5635001	chrX_5635001	0.15	RAL-340_100b
1711	chrX	5641408	5641848	copia	194	4867	71	440	'48-23	64.95	8.4	7.6	intron	CG42492 -	chrX_71_5640001	chrX_5640001	0.68	RAL-340_100b
1712	chrX	5864581	5864734	Transpac	153	2	33	153	'21-12	66.52	8.1	3.6	3` UTR	CG43137 -	chrX_33_5860001	chrX_5860001	0.64	RAL-340_100b
1713	chrX	5869301	5869372	F-element	4456	4547	4	71	'1-3	66.00	23.2	0.2	exon	CG15764 +	chrX_4_5865001	chrX_5865001	0.25	RAL-340_100b
1714	chrX	5873873	5874025	G5A	2709	2711	10	152	'5-5	66.20	12.3	0.8	3` UTR	mof -	chrX_10_5870001	chrX_5870001	0.50	RAL-340_100b
1715	chrX	6125809	6125875	mdg1	33	7075	7	66	'6-1	71.21	18.9	0.4	intron	Ca-alpha1T -	chrX_7_6125001	chrX_6125001	0.86	RAL-340_100b
1716	chrX	6417724	6417846	Quasimodo	37	38	7	122	'5-2	67.04	32.6	0.2	intergenic	not near genes	chrX_7_6415001	chrX_6415001	0.71	RAL-340_100b
1717	chrX	6757107	6757529	INE-1	124	549	4	422	'2-2	61.18	12.5	0.3	intron	CG14438 +	chrX_4_6755001	chrX_6755001	0.50	RAL-340_100b
1718	chrX	6757227	6757522	1360	12	158	4	295	'2-2	70.44	13.7	0.3	intron	CG14438 +	chrX_4_6755001	chrX_6755001	0.50	RAL-340_100b
1719	chrX	6758126	6758310	INE-1	11	18	6	184	'3-3	74.23	3.3	1.4	intron	CG14438 +	chrX_6_6755001	chrX_6755001	0.50	RAL-340_100b
1720	chrX	6893627	6893741	roo	402	12	21	114	'10-11	63.53	7.3	2.5	intergenic	not near genes	chrX_21_6890001	chrX_6890001	0.48	RAL-340_100b
1721	chrX	7055414	7055654	hobo	2912	74	30	240	'17-13	64.86	12.2	2.3	intron	CG12541 -	chrX_30_7055001	chrX_7055001	0.57	RAL-340_100b
1722	chrX	7475975	7476282	hobo	45	2857	32	307	'15-17	63.90	12.4	2.4	intergenic	not near genes	chrX_32_7475001	chrX_7475001	0.47	RAL-340_100b
1723	chrX	7480759	7480796	Doc2-element	227	230	4	37	'3-1	59.92	29.3	0.1	intergenic	not near genes	chrX_4_7480001	chrX_7480001	0.75	RAL-340_100b
1724	chrX	7603899	7604045	1360	3186	3152	4	146	'3-1	71.05	26.7	0.1	intergenic	not near genes	chrX_4_7600001	chrX_7600001	0.75	RAL-340_100b
1725	chrX	7828372	7828773	roo	402	8675	68	401	'34-34	66.82	11.6	5.4	intron	CG1402 +	chrX_68_7825001	chrX_7825001	0.50	RAL-340_100b
1726	chrX	7978913	7978953	accord	7118	7027	14	40	'1-13	68.73	63.8	0.2	intron	sn +	chrX_14_7975001	chrX_7975001	0.07	RAL-340_100b
1727	chrX	8027228	8027561	Juan	4206	149	24	333	'3-21	66.16	10.9	2.0	3` UTR	Tbh +	chrX_24_8025001	chrX_8025001	0.12	RAL-340_100b
1728	chrX	8191455	8191606	accord	149	181	4	151	'1-3	75.45	24.4	0.2	intron	sdt +	chrX_4_8190001	chrX_8190001	0.25	RAL-340_100b
1729	chrX	8286447	8286674	297	391	6639	37	227	'36-1	66.63	14.9	2.3	exon	nAChRalpha3 -	chrX_37_8285001	chrX_8285001	0.97	RAL-340_100b
1730	chrX	8310989	8311454	invader3	5082	5080	5	465	'4-1	72.66	12.0	0.4	intron	nAChRalpha3 -	chrX_5_8310001	chrX_8310001	0.80	RAL-340_100b
1731	chrX	8311898	8312209	412	7092	398	27	311	'18-9	66.72	10.5	2.3	intron	nAChRalpha3 -	chrX_27_8310001	chrX_8310001	0.67	RAL-340_100b
1732	chrX	8460453	8460535	HB	1584	86	4	82	'2-2	73.90	27.8	0.1	intron	CG15347 -	chrX_4_8460001	chrX_8460001	0.50	RAL-340_100b
1733	chrX	8536148	8536563	roo	408	8779	61	415	'2-59	66.98	6.1	8.6	intron	Nrg +	chrX_61_8535001	chrX_8535001	0.03	RAL-340_100b
1734	chrX	8842510	8842793	roo	8780	352	43	283	'29-14	64.24	7.3	5.2	intron	CG12075 +	chrX_43_8840001	chrX_8840001	0.67	RAL-340_100b
1735	chrX	8927474	8927595	FB	98	247	5	121	'2-3	67.75	16.2	0.3	intron	rdgA +	chrX_5_8925001	chrX_8925001	0.40	RAL-340_100b
1736	chrX	8975784	8976037	TAHRE	70	270	17	253	'1-16	63.69	18.8	0.9	intron,intron	rdgA +,CR43836 -	chrX_17_8975001	chrX_8975001	0.06	RAL-340_100b
1737	chrX	9023514	9023561	Cr1a	258	404	5	47	'1-4	71.15	44.6	0.1	intron,intron	rdgA +,CR43836 -	chrX_5_9020001	chrX_9020001	0.20	RAL-340_100b
1738	chrX	9152273	9152413	1360	5	132	81	140	'44-37	67.65	28.8	2.7	intergenic	His3.3B -,dalao +	chrX_81_9150001	chrX_9150001	0.54	RAL-340_100b
1739	chrX	9173745	9174042	mdg1	7081	7081	4	297	'1-3	68.36	10.6	0.3	3` UTR	mei-P26 +	chrX_4_9170001	chrX_9170001	0.25	RAL-340_100b
1740	chrX	9178941	9179326	hopper	142	141	6	385	'5-1	69.24	16.2	0.3	3` UTR	mei-P26 +	chrX_6_9175001	chrX_9175001	0.83	RAL-340_100b
1741	chrX	9217663	9217752	Juan	4189	4058	4	89	'3-1	64.92	0.2	3.3	3` UTR	t -	chrX_4_9215001	chrX_9215001	0.75	RAL-340_100b
1742	chrX	9342447	9342758	FB	8	16	37	311	'4-33	64.80	12.2	2.8	intron	CG34449 -	chrX_37_9340001	chrX_9340001	0.11	RAL-340_100b
1743	chrX	9379788	9380194	297	6606	6959	35	406	'11-24	68.44	15.3	2.1	intron	mgl -	chrX_35_9375001	chrX_9375001	0.31	RAL-340_100b
1744	chrX	9513922	9514350	McClintock	5985	6429	58	428	'14-44	68.42	12.1	4.4	intron	CG32700 -	chrX_58_9510001	chrX_9510001	0.24	RAL-340_100b
1745	chrX	9524869	9525292	accord	183	255	4	423	'3-1	67.36	29.5	0.1	intron	CG32700 -	chrX_4_9520001	chrX_9520001	0.75	RAL-340_100b
1746	chrX	9581003	9581059	G7	1163	1163	5	56	'2-3	68.00	23.8	0.2	intergenic	CR45540 -	chrX_5_9580001	chrX_9580001	0.40	RAL-340_100b
1747	chrX	9582873	9583224	I-element	5347	120	62	351	'15-47	64.72	9.7	5.8	intergenic	not near genes	chrX_62_9580001	chrX_9580001	0.24	RAL-340_100b
1748	chrX	9788065	9788301	pogo	109	1971	40	236	'18-22	68.79	10.0	3.6	intron	CG32698 +	chrX_40_9785001	chrX_9785001	0.45	RAL-340_100b
1749	chrX	9815961	9816194	jockey	4822	4922	30	233	'5-25	71.22	15.6	1.8	intron	CG32698 +	chrX_30_9815001	chrX_9815001	0.17	RAL-340_100b
1750	chrX	9845251	9845586	accord	185	188	14	335	'13-1	62.43	39.8	0.3	intron	CG32698 +	chrX_14_9845001	chrX_9845001	0.93	RAL-340_100b
1751	chrX	9915492	9915977	jockey	4967	4860	25	485	'11-14	67.00	17.4	1.4	intergenic	not near genes	chrX_25_9915001	chrX_9915001	0.44	RAL-340_100b
1752	chrX	9955361	9955636	accord	187	7058	12	275	'6-6	63.89	20.2	0.6	intergenic	not near genes	chrX_12_9955001	chrX_9955001	0.50	RAL-340_100b
1753	chrX	10065657	10066041	Stalker2	386	37	34	384	'11-23	66.20	8.0	3.8	intron	CG15312 -	chrX_34_10065001	chrX_10065001	0.32	RAL-340_100b
1754	chrX	10068450	10068722	F-element	4649	92	17	272	'2-15	71.41	8.7	1.8	intron	CG15312 -	chrX_17_10065001	chrX_10065001	0.12	RAL-340_100b
1755	chrX	10221005	10221320	pogo	2089	2083	51	315	'49-2	65.85	10.1	4.6	intron	CG34408 +	chrX_51_10220001	chrX_10220001	0.96	RAL-340_100b
1756	chrX	10297757	10298007	copia	1	5053	58	250	'57-1	64.72	5.9	8.4	intron	alpha-Man-I -	chrX_58_10295001	chrX_10295001	0.98	RAL-340_100b
1757	chrX	10420866	10421212	opus	281	212	4	346	'1-3	70.04	21.7	0.2	exon	CG32683 -	chrX_4_10420001	chrX_10420001	0.25	RAL-340_100b
1758	chrX	10436688	10436897	blood	48	363	31	209	'11-20	63.12	4.3	5.8	intron	CG32683 -	chrX_31_10435001	chrX_10435001	0.35	RAL-340_100b
1759	chrX	10445454	10445562	INE-1	576	540	8	108	'1-7	70.78	6.1	1.1	intron	CG32683 -	chrX_8_10445001	chrX_10445001	0.12	RAL-340_100b
1760	chrX	11270055	11270234	hopper	54	1344	5	179	'2-3	76.13	28.6	0.2	intron	CG44422 -	chrX_5_11270001	chrX_11270001	0.40	RAL-340_100b
1761	chrX	11320816	11321003	Transpac	11	5204	30	187	'11-19	68.37	9.7	2.8	intergenic	not near genes	chrX_30_11320001	chrX_11320001	0.37	RAL-340_100b
1762	chrX	11451927	11452161	S-element	1675	101	27	234	'19-8	68.41	13.2	1.9	intron	Evi5 -	chrX_27_11450001	chrX_11450001	0.70	RAL-340_100b
1763	chrX	11468995	11469162	jockey	8	4897	22	167	'18-4	65.11	13.6	1.5	intron	CG43155 +	chrX_22_11465001	chrX_11465001	0.82	RAL-340_100b
1764	chrX	11534786	11534929	1731	4412	4410	4	143	'1-3	75.12	10.8	0.3	intron	Drak +	chrX_4_11530001	chrX_11530001	0.25	RAL-340_100b
1765	chrX	11606186	11606255	Tom1	366	371	11	69	'4-7	67.50	16.5	0.6	3` UTR	rho-4 +	chrX_11_11605001	chrX_11605001	0.36	RAL-340_100b
1766	chrX	11705328	11705451	accord	185	180	7	123	'6-1	67.74	14.2	0.5	intergenic	CG2444 -	chrX_7_11705001	chrX_11705001	0.86	RAL-340_100b
1767	chrX	11761991	11762121	Porto1	170	170	4	130	'1-3	66.80	11.2	0.3	intron	m +	chrX_4_11760001	chrX_11760001	0.25	RAL-340_100b
1768	chrX	11813012	11813181	F-element	4540	4669	4	169	'2-2	74.12	11.0	0.3	intron	CG1578 -	chrX_4_11810001	chrX_11810001	0.50	RAL-340_100b
1769	chrX	11830857	11831359	Stalker3T	206	201	4	502	'2-2	52.25	34.1	0.1	intron	rudhira +	chrX_4_11830001	chrX_11830001	0.50	RAL-340_100b
1770	chrX	11906331	11906440	INE-1	174	84	6	109	'3-3	68.19	10.6	0.5	intergenic	CG43156 -	chrX_6_11905001	chrX_11905001	0.50	RAL-340_100b
1771	chrX	11925066	11925189	blood	7180	167	4	123	'3-1	71.55	7.3	0.5	intergenic	Sclp -	chrX_4_11925001	chrX_11925001	0.75	RAL-340_100b
1772	chrX	11980302	11980333	NOF	3954	3954	4	31	'1-3	78.73	11.5	0.3	intron	cac -	chrX_4_11980001	chrX_11980001	0.25	RAL-340_100b
1773	chrX	12046103	12046367	FB	4	27	83	264	'78-5	66.73	12.0	6.4	intron,intron	CR43960 +,Ten-a +	chrX_83_12045001	chrX_12045001	0.94	RAL-340_100b
1774	chrX	12352288	12352489	jockey	4865	4825	38	201	'19-19	63.26	7.5	4.5	intergenic	not near genes	chrX_38_12350001	chrX_12350001	0.50	RAL-340_100b
1775	chrX	12568588	12568713	jockey	4953	4900	7	125	'1-6	71.99	13.2	0.5	intergenic	CG43921 -	chrX_7_12565001	chrX_12565001	0.14	RAL-340_100b
1776	chrX	12649914	12649956	Cr1a	492	321	6	42	'5-1	78.30	86.2	0.1	intron	Tomosyn +	chrX_6_12645001	chrX_12645001	0.83	RAL-340_100b
1777	chrX	12649914	12649945	Stalker3T	202	205	7	31	'6-1	59.26	90.7	0.1	intron	Tomosyn +	chrX_7_12645001	chrX_12645001	0.86	RAL-340_100b
1778	chrX	12771591	12771754	1360	3344	3273	11	163	'10-1	69.76	14.9	0.7	3` UTR	CG3812 +	chrX_11_12770001	chrX_12770001	0.91	RAL-340_100b
1779	chrX	12806399	12806929	P-element	2877	2852	34	530	'32-2	51.27	9.1	3.4	intron	Pde9 -	chrX_34_12805001	chrX_12805001	0.94	RAL-340_100b
1780	chrX	12836857	12837049	hopper	20	1401	36	192	'1-35	67.93	20.1	1.7	intron	Pde9 -	chrX_36_12835001	chrX_12835001	0.03	RAL-340_100b
1781	chrX	12849812	12849933	BS	5071	5043	18	121	'1-17	62.73	8.9	1.8	intron	Pde9 -	chrX_18_12845001	chrX_12845001	0.06	RAL-340_100b
1782	chrX	12873169	12873491	Porto1	161	162	4	322	'2-2	67.33	12.6	0.3	intron	Pde9 -	chrX_4_12870001	chrX_12870001	0.50	RAL-340_100b
1783	chrX	13271022	13271263	mdg1	7082	31	9	241	'7-2	64.79	17.7	0.5	intron	HDAC4 -	chrX_9_13270001	chrX_13270001	0.78	RAL-340_100b
1784	chrX	13277048	13277394	P-element	32	2884	56	346	'13-43	47.59	10.6	4.8	intron	HDAC4 -	chrX_56_13275001	chrX_13275001	0.23	RAL-340_100b
1785	chrX	13352370	13352453	accord	245	179	4	83	'2-2	55.72	15.3	0.2	intergenic	not near genes	chrX_4_13350001	chrX_13350001	0.50	RAL-340_100b
1786	chrX	13383539	13383756	mdg1	27	7069	5	217	'3-2	63.46	41.4	0.1	intron	Rbp1-like -	chrX_5_13380001	chrX_13380001	0.60	RAL-340_100b
1787	chrX	13507305	13507548	roo	1	346	62	243	'57-5	69.37	8.0	6.9	intron	Neto +	chrX_62_13505001	chrX_13505001	0.92	RAL-340_100b
1788	chrX	13573219	13573349	HMS-Beagle	1	7040	51	130	'27-24	66.47	14.4	3.3	intron	Tango13 +	chrX_51_13570001	chrX_13570001	0.53	RAL-340_100b
1789	chrX	13631712	13632057	mdg1	7064	7060	4	345	'2-2	73.58	9.0	0.4	intron	NFAT +	chrX_4_13630001	chrX_13630001	0.50	RAL-340_100b
1790	chrX	13640807	13641013	roo	3	307	54	206	'45-9	68.75	9.1	5.3	intron	NFAT +	chrX_54_13640001	chrX_13640001	0.83	RAL-340_100b
1791	chrX	13682566	13682939	roo	43	8979	44	373	'27-17	68.13	6.8	5.6	intergenic	CG11158 +	chrX_44_13680001	chrX_13680001	0.61	RAL-340_100b
1792	chrX	13755258	13755667	P-element	26	2822	56	409	'32-24	47.82	11.5	4.5	5` UTR	Pdcd4 -	chrX_56_13755001	chrX_13755001	0.57	RAL-340_100b
1793	chrX	13851742	13851851	mdg1	37	7067	6	109	'3-3	67.90	13.0	0.4	3` UTR	mamo -	chrX_6_13850001	chrX_13850001	0.50	RAL-340_100b
1794	chrX	13961335	13961628	roo	20	394	55	293	'46-9	65.53	7.9	6.2	intron	mamo -	chrX_55_13960001	chrX_13960001	0.84	RAL-340_100b
1795	chrX	14172679	14172770	1360	37	3	5	91	'2-3	77.40	8.8	0.5	intergenic	betaNACtes1 -	chrX_5_14170001	chrX_14170001	0.40	RAL-340_100b
1796	chrX	14215320	14215697	roo	9011	8676	54	377	'27-27	65.13	7.1	6.7	intron	l(1)G0007 +	chrX_54_14215001	chrX_14215001	0.50	RAL-340_100b
1797	chrX	14260277	14260347	INE-1	543	299	5	70	'3-2	62.13	20.0	0.2	intergenic	not near genes	chrX_5_14260001	chrX_14260001	0.60	RAL-340_100b
1798	chrX	14265237	14265468	S-element	84	1714	41	231	'6-35	69.01	8.1	4.5	3` UTR,3` UTR	CG1461 +,CG13404 -	chrX_41_14265001	chrX_14265001	0.15	RAL-340_100b
1799	chrX	14317338	14317418	1360	15	250	21	80	'2-19	72.62	12.8	1.5	intergenic	betaNACtes6 -	chrX_21_14315001	chrX_14315001	0.10	RAL-340_100b
1800	chrX	14576151	14576473	412	467	210	48	322	'4-44	67.08	9.6	4.5	intergenic	not near genes	chrX_48_14575001	chrX_14575001	0.08	RAL-340_100b
1801	chrX	14602390	14602786	P-element	73	2859	52	396	'35-17	55.37	12.1	4.0	intron	CG9413 -	chrX_52_14600001	chrX_14600001	0.67	RAL-340_100b
1802	chrX	14620606	14620686	hopper	145	149	4	80	'3-1	76.03	20.4	0.2	intron	NetA -	chrX_4_14620001	chrX_14620001	0.75	RAL-340_100b
1803	chrX	14672675	14673080	roo	360	96	58	405	'30-28	67.03	6.5	7.7	intergenic	not near genes	chrX_58_14670001	chrX_14670001	0.52	RAL-340_100b
1804	chrX	14770314	14770782	INE-1	472	552	16	468	'3-13	75.81	11.1	1.3	intergenic	not near genes	chrX_16_14770001	chrX_14770001	0.19	RAL-340_100b
1805	chrX	14771963	14772150	jockey	4792	4815	37	187	'10-27	62.91	11.8	2.9	intergenic	not near genes	chrX_37_14770001	chrX_14770001	0.27	RAL-340_100b
1806	chrX	14825839	14826307	P-element	2881	45	35	468	'25-10	44.35	13.0	2.5	intron	rut -	chrX_35_14825001	chrX_14825001	0.71	RAL-340_100b
1807	chrX	14842456	14842686	FB	4	4	54	230	'47-7	66.95	8.6	5.6	intron	Flo2 +	chrX_54_14840001	chrX_14840001	0.87	RAL-340_100b
1808	chrX	14925870	14926301	F-element	4469	4438	4	431	'2-2	66.27	24.1	0.2	intron	Flo2 +	chrX_4_14925001	chrX_14925001	0.50	RAL-340_100b
1809	chrX	14983434	14983704	hopper	2	1350	79	270	'76-3	63.18	8.3	8.5	intron	eag +	chrX_79_14980001	chrX_14980001	0.96	RAL-340_100b
1810	chrX	14984283	14984657	hopper	1364	100	15	374	'13-2	64.30	13.3	1.0	intron	eag +	chrX_15_14980001	chrX_14980001	0.87	RAL-340_100b
1811	chrX	14991111	14991291	F-element	4396	4395	4	180	'2-2	70.06	25.1	0.2	intron	eag +	chrX_4_14990001	chrX_14990001	0.50	RAL-340_100b
1812	chrX	15017852	15017924	INE-1	86	105	4	72	'1-3	68.76	19.4	0.2	exon	hiw -	chrX_4_15015001	chrX_15015001	0.25	RAL-340_100b
1813	chrX	15047882	15047965	HB	1475	1579	4	83	'2-2	61.06	13.8	0.3	intron,intron	hiw -,CG5541 +	chrX_4_15045001	chrX_15045001	0.50	RAL-340_100b
1814	chrX	15409876	15410084	INE-1	538	550	4	208	'2-2	75.28	16.7	0.2	intron	Cngl -	chrX_4_15405001	chrX_15405001	0.50	RAL-340_100b
1815	chrX	15435493	15435630	rover	88	151	8	137	'5-3	66.84	21.4	0.4	intron	Cngl -	chrX_8_15435001	chrX_15435001	0.62	RAL-340_100b
1816	chrX	15520776	15520925	P-element	2692	2692	4	149	'3-1	72.07	9.7	0.4	intron	Ac13E -	chrX_4_15520001	chrX_15520001	0.75	RAL-340_100b
1817	chrX	15553050	15553266	Transib-N1_DM	54	355	7	216	'3-4	73.02	13.3	0.5	intron	Ac13E -	chrX_7_15550001	chrX_15550001	0.43	RAL-340_100b
1818	chrX	15690463	15690634	Cr1a	4307	4153	6	171	'1-5	69.40	8.9	0.6	intron	CG43132 +	chrX_6_15690001	chrX_15690001	0.17	RAL-340_100b
1819	chrX	15746104	15746671	jockey2	3285	3311	15	567	'8-7	67.36	9.7	1.4	5` UTR	CG8944 -	chrX_15_15745001	chrX_15745001	0.53	RAL-340_100b
1820	chrX	15836841	15836963	INE-1	123	160	6	122	'3-3	66.43	18.6	0.3	3` UTR	CG32582 +	chrX_6_15835001	chrX_15835001	0.50	RAL-340_100b
1821	chrX	15841109	15841182	INE-1	145	142	18	73	'9-9	60.74	15.0	1.1	3` UTR	CG8565 +	chrX_18_15840001	chrX_15840001	0.50	RAL-340_100b
1822	chrX	15867924	15868333	P-element	13	2851	45	409	'25-20	47.51	9.3	4.4	intergenic	Gapdh2 +	chrX_45_15865001	chrX_15865001	0.56	RAL-340_100b
1823	chrX	15871780	15872042	pogo	26	2095	48	262	'5-43	68.78	8.6	5.0	intron	CG16952 +	chrX_48_15870001	chrX_15870001	0.10	RAL-340_100b
1824	chrX	15890129	15890366	Bari1	319	142	4	237	'1-3	58.76	8.0	0.4	intergenic	MSBP -,CG15916 +	chrX_4_15890001	chrX_15890001	0.25	RAL-340_100b
1825	chrX	15903310	15903421	INE-1	577	575	12	111	'11-1	65.19	5.8	1.8	intron	shi +	chrX_12_15900001	chrX_15900001	0.92	RAL-340_100b
1826	chrX	16116136	16116372	INE-1	552	571	7	236	'2-5	67.86	12.8	0.5	intergenic	not near genes	chrX_7_16115001	chrX_16115001	0.29	RAL-340_100b
1827	chrX	16372627	16372808	P-element	2830	39	6	181	'2-4	37.58	14.0	0.4	intergenic	Fur2 +	chrX_6_16370001	chrX_16370001	0.33	RAL-340_100b
1828	chrX	16595110	16595377	Tc1	262	62	5	267	'3-2	74.95	7.9	0.6	3` UTR	crl +	chrX_5_16595001	chrX_16595001	0.60	RAL-340_100b
1829	chrX	16726864	16727324	jockey2	3385	3381	7	460	'5-2	63.58	5.6	1.1	3` UTR	CG32572 +	chrX_7_16725001	chrX_16725001	0.71	RAL-340_100b
1830	chrX	16837792	16838293	INE-1	556	558	12	501	'2-10	71.15	16.2	0.7	intergenic	RSG7 -	chrX_12_16835001	chrX_16835001	0.17	RAL-340_100b
1831	chrX	16980382	16980506	springer	3	7521	29	124	'14-15	65.78	9.0	2.9	intron	CG45002 -	chrX_29_16980001	chrX_16980001	0.48	RAL-340_100b
1832	chrX	17521255	17521528	flea	4934	4986	28	273	'24-4	65.40	11.1	2.3	intron	CG43658 -	chrX_28_17520001	chrX_17520001	0.86	RAL-340_100b
1833	chrX	17837855	17838168	S-element	113	64	34	313	'21-13	69.55	13.4	2.4	intron	CG6398 +	chrX_34_17835001	chrX_17835001	0.62	RAL-340_100b
1834	chrX	17971793	17971843	accord	7035	185	8	50	'1-7	71.07	33.2	0.2	intron	Sh -	chrX_8_17970001	chrX_17970001	0.12	RAL-340_100b
1835	chrX	17987724	17987889	accord	67	7033	4	165	'2-2	58.95	10.0	0.4	intron	Sh -	chrX_4_17985001	chrX_17985001	0.50	RAL-340_100b
1836	chrX	18083028	18083206	Burdock	314	312	5	178	'3-2	64.58	9.2	0.5	intron	CG7536 -	chrX_5_18080001	chrX_18080001	0.60	RAL-340_100b
1837	chrX	18131082	18131296	1360	3383	18	7	214	'5-2	69.00	17.0	0.4	3` UTR	ari-1 -	chrX_7_18130001	chrX_18130001	0.71	RAL-340_100b
1838	chrX	18162096	18162193	roo	8672	394	4	97	'2-2	71.64	20.0	0.2	intron	Frq1 +	chrX_4_18160001	chrX_18160001	0.50	RAL-340_100b
1839	chrX	18170810	18171137	opus	57	7437	21	327	'7-14	68.76	10.5	1.8	3` UTR	Frq1 +	chrX_21_18170001	chrX_18170001	0.33	RAL-340_100b
1840	chrX	18193454	18193965	hopper	1375	41	46	511	'5-41	63.45	6.1	6.5	intron	Frq2 +	chrX_46_18190001	chrX_18190001	0.11	RAL-340_100b
1841	chrX	18239036	18239093	jockey	4556	4606	27	57	'12-15	63.10	9.8	2.5	intergenic	not near genes	chrX_27_18235001	chrX_18235001	0.44	RAL-340_100b
1842	chrX	18239414	18239444	jockey	4952	4984	17	30	'8-9	60.07	6.4	2.3	intergenic	not near genes	chrX_17_18235001	chrX_18235001	0.47	RAL-340_100b
1843	chrX	18443641	18443742	Idefix	7385	24	4	101	'2-2	64.81	16.3	0.2	3` UTR	CG32547 -	chrX_4_18440001	chrX_18440001	0.50	RAL-340_100b
1844	chrX	18607861	18607968	F-element	290	4211	5	107	'2-3	65.84	68.2	0.1	exon	CG15040 -	chrX_5_18605001	chrX_18605001	0.40	RAL-340_100b
1845	chrX	18722509	18722743	roo	56	402	10	234	'2-8	72.37	13.2	0.7	intron	CCKLR-17D1 -	chrX_10_18720001	chrX_18720001	0.20	RAL-340_100b
1846	chrX	19073861	19073905	X-element	4711	4687	18	44	'11-7	63.09	4.8	3.1	intergenic	not near genes	chrX_18_19070001	chrX_19070001	0.61	RAL-340_100b
1847	chrX	19289865	19290041	copia	5057	236	50	176	'37-13	67.26	7.2	6.1	intron	CG8034 -	chrX_50_19285001	chrX_19285001	0.74	RAL-340_100b
1848	chrX	19316583	19316972	FB	39	30	73	389	'37-36	65.99	7.2	8.9	intron	out -	chrX_73_19315001	chrX_19315001	0.51	RAL-340_100b
1849	chrX	19502217	19502339	FB	23	82	5	122	'1-4	73.51	17.2	0.3	intron,intron	CG14200 +,Pfrx +	chrX_5_19500001	chrX_19500001	0.20	RAL-340_100b
1850	chrX	19502973	19503179	FB	352	5	9	206	'5-4	67.46	9.4	0.9	intron,intron	CG14200 +,Pfrx +	chrX_9_19500001	chrX_19500001	0.56	RAL-340_100b
1851	chrX	19666938	19666966	G5A	2792	2746	6	28	'4-2	65.95	27.5	0.2	intergenic	Ssu72 +,CR44512 -,Zw +	chrX_6_19665001	chrX_19665001	0.67	RAL-340_100b
1852	chrX	19809728	19809887	roo	325	184	7	159	'2-5	71.70	14.7	0.4	intergenic	not near genes	chrX_7_19805001	chrX_19805001	0.29	RAL-340_100b
1853	chrX	19813645	19813681	Gypsy12A_LTR	2087	2088	9	36	'7-2	66.22	23.7	0.4	intergenic	skpD +	chrX_9_19810001	chrX_19810001	0.78	RAL-340_100b
1854	chrX	19873419	19873758	copia	5058	4882	81	339	'65-16	67.91	16.2	4.7	intron	Hers +	chrX_81_19870001	chrX_19870001	0.80	RAL-340_100b
1855	chrX	19887131	19887425	P-element	2879	2860	46	294	'45-1	46.04	8.7	4.7	intron,exon	Hers +,amn -	chrX_46_19885001	chrX_19885001	0.98	RAL-340_100b
1856	chrX	19894212	19894261	Juan	4180	4179	4	49	'1-3	73.36	33.1	0.1	intron	Hers +	chrX_4_19890001	chrX_19890001	0.25	RAL-340_100b
1857	chrX	19968743	19969110	Idefix	7385	120	8	367	'2-6	65.78	8.6	0.8	3` UTR	Nep3 +	chrX_8_19965001	chrX_19965001	0.25	RAL-340_100b
1858	chrX	20087937	20088208	roo	71	9001	34	271	'2-32	72.18	10.3	3.0	intergenic	not near genes	chrX_34_20085001	chrX_20085001	0.06	RAL-340_100b
1859	chrX	20099759	20099940	S-element	1674	1671	16	181	'4-12	66.90	8.2	1.7	intergenic	not near genes	chrX_16_20095001	chrX_20095001	0.25	RAL-340_100b
1860	chrX	20106329	20106448	mdg1	7343	7051	27	119	'20-7	63.33	12.4	2.0	intergenic	not near genes	chrX_27_20105001	chrX_20105001	0.74	RAL-340_100b
1861	chrX	20140661	20140700	1360	55	203	7	39	'3-4	75.30	27.1	0.2	intergenic	CG34332 +,CG42583 +	chrX_7_20140001	chrX_20140001	0.43	RAL-340_100b
1862	chrX	20165295	20165398	Idefix	2	56	6	103	'1-5	76.93	12.5	0.4	intron	Phf7 -	chrX_6_20165001	chrX_20165001	0.17	RAL-340_100b
1863	chrX	20349317	20349490	INE-1	576	540	4	173	'2-2	61.69	16.2	0.2	intergenic	not near genes	chrX_4_20345001	chrX_20345001	0.50	RAL-340_100b
1864	chrX	20385419	20385632	G4	3801	3800	6	213	'4-2	68.34	15.8	0.4	intergenic	not near genes	chrX_6_20385001	chrX_20385001	0.67	RAL-340_100b
1865	chrX	20466989	20467114	Idefix	389	7364	11	125	'10-1	63.33	6.5	1.5	3` UTR	CG32506 +	chrX_11_20465001	chrX_20465001	0.91	RAL-340_100b
1866	chrX	20503934	20504150	transib2	57	177	29	216	'10-19	71.11	19.1	1.4	intron	RhoGAP19D -	chrX_29_20500001	chrX_20500001	0.34	RAL-340_100b
1867	chrX	20528099	20528303	INE-1	541	575	4	204	'1-3	70.16	16.8	0.2	intergenic	CG42579 +	chrX_4_20525001	chrX_20525001	0.25	RAL-340_100b
1868	chrX	20535963	20536014	F-element	66	15	32	51	'16-16	61.95	12.4	2.4	intergenic	not near genes	chrX_32_20535001	chrX_20535001	0.50	RAL-340_100b
1869	chrX	20956365	20956422	Burdock	128	8	30	57	'18-12	67.42	9.2	2.9	intergenic	not near genes	chrX_30_20955001	chrX_20955001	0.60	RAL-340_100b
1870	chrX	21020189	21020315	Idefix	7	449	12	126	'10-2	59.22	0.4	8.6	intergenic	not near genes	chrX_12_21020001	chrX_21020001	0.83	RAL-340_100b
1871	chrX	21049346	21049523	Ivk	5360	5330	12	177	'3-9	69.25	4.6	2.1	intergenic	Cbs +	chrX_12_21045001	chrX_21045001	0.25	RAL-340_100b
1872	chrX	21087443	21087675	mdg3	5337	235	31	232	'3-28	65.01	2.5	8.9	intergenic	not near genes	chrX_31_21085001	chrX_21085001	0.10	RAL-340_100b
1873	chrX	21096873	21096955	S-element	161	1615	7	82	'6-1	73.78	16.2	0.4	intron,intron,intron	CG11566 +,stg1 +,CG15446 -	chrX_7_21095001	chrX_21095001	0.86	RAL-340_100b
1874	chrX	21097534	21097665	INE-1	253	260	5	131	'4-1	66.48	11.0	0.4	intron,intron,intron	CG11566 +,stg1 +,CG15446 -	chrX_5_21095001	chrX_21095001	0.80	RAL-340_100b
1875	chrX	21122716	21122961	Bari1	119	1541	64	245	'26-38	65.13	9.5	6.1	intergenic	not near genes	chrX_64_21120001	chrX_21120001	0.41	RAL-340_100b
1876	chrX	21131809	21132075	FB	1	15	30	266	'28-2	63.33	4.7	5.3	intron	CG34120 +	chrX_30_21130001	chrX_21130001	0.93	RAL-340_100b
1877	chrX	21156659	21156751	jockey	4767	4608	5	92	'3-2	68.60	15.1	0.3	intergenic	not near genes	chrX_5_21155001	chrX_21155001	0.60	RAL-340_100b
1878	chrX	21246866	21247100	opus	113	7442	29	234	'10-19	71.57	15.7	1.7	intron	CG32521 -	chrX_29_21245001	chrX_21245001	0.34	RAL-340_100b
1879	chrX	21254668	21254729	hopper	163	159	5	61	'4-1	75.32	16.2	0.3	intron	CG32521 -	chrX_5_21250001	chrX_21250001	0.80	RAL-340_100b
1880	chrX	21287058	21287182	opus	355	327	4	124	'1-3	66.16	11.7	0.3	exon	CG1494 +	chrX_4_21285001	chrX_21285001	0.25	RAL-340_100b
1881	chrX	21322722	21322898	Juan	4077	4172	23	176	'10-13	66.70	7.7	2.6	intron	Dd -	chrX_23_21320001	chrX_21320001	0.43	RAL-340_100b
1882	chrX	21387898	21388027	INE-1	541	542	14	129	'1-13	62.54	5.1	2.3	5` UTR	Hlc -	chrX_14_21385001	chrX_21385001	0.07	RAL-340_100b
1883	chrX	21387937	21387978	Doc	4686	4687	5	41	'4-1	59.64	7.5	0.6	5` UTR	Hlc -	chrX_5_21385001	chrX_21385001	0.80	RAL-340_100b
1884	chrX	21399300	21399594	pogo	59	2012	39	294	'19-20	67.68	10.1	3.5	intergenic	not near genes	chrX_39_21395001	chrX_21395001	0.49	RAL-340_100b
1885	chrX	21421859	21422046	INE-1	531	536	10	187	'8-2	79.44	14.8	0.6	intergenic	CG42343 -	chrX_10_21420001	chrX_21420001	0.80	RAL-340_100b
1886	chrX	21452439	21452730	INE-1	543	549	7	291	'6-1	68.50	14.1	0.5	intron	CG42343 -	chrX_7_21450001	chrX_21450001	0.86	RAL-340_100b
1887	chrX	21479952	21479987	jockey	4955	4990	16	35	'7-9	62.21	20.0	0.8	intergenic	CR45509 -	chrX_16_21475001	chrX_21475001	0.44	RAL-340_100b
1888	chrX	21555959	21555991	Copia1_DM	157	60	4	32	'2-2	72.82	24.0	0.2	intergenic	not near genes	chrX_4_21555001	chrX_21555001	0.50	RAL-340_100b
1889	chrX	21585878	21586012	mariner2	658	708	9	134	'5-4	67.02	15.7	0.5	intergenic	not near genes	chrX_9_21585001	chrX_21585001	0.56	RAL-340_100b
1890	chrX	21587703	21587886	INE-1	138	124	9	183	'7-2	74.56	3.2	2.1	intergenic	not near genes	chrX_9_21585001	chrX_21585001	0.78	RAL-340_100b
1891	chrX	21636121	21636227	jockey2	3332	3294	7	106	'4-3	69.82	13.6	0.5	intergenic	not near genes	chrX_7_21635001	chrX_21635001	0.57	RAL-340_100b
1892	chrX	21638082	21638235	gtwin	48	19	19	153	'18-1	64.62	15.1	1.2	intergenic	not near genes	chrX_19_21635001	chrX_21635001	0.95	RAL-340_100b
1893	chrX	21639572	21639711	Tirant	8494	8132	29	139	'8-21	64.93	26.9	1.0	intergenic	not near genes	chrX_29_21635001	chrX_21635001	0.28	RAL-340_100b
1894	chrX	21667900	21668079	gypsy2	20	6617	14	179	'11-3	67.19	22.2	0.6	intergenic	not near genes	chrX_14_21665001	chrX_21665001	0.79	RAL-340_100b
1895	chrX	21668724	21668966	mdg1	7367	15	13	242	'2-11	62.89	11.1	1.1	intergenic	not near genes	chrX_13_21665001	chrX_21665001	0.15	RAL-340_100b
1896	chrX	21945892	21946081	mdg1	351	343	4	189	'3-1	77.16	0.0	4.0	intergenic	not near genes	chrX_4_21945001	chrX_21945001	0.75	RAL-340_100b
1897	chrX	21999993	22000060	Quasimodo	343	111	12	67	'7-5	67.47	0.0	12.0	intergenic	not near genes	chrX_12_21995001	chrX_21995001	0.58	RAL-340_100b
1898	chrX	22218707	22218824	Ivk	5332	5262	4	117	'3-1	77.75	1.4	1.7	intergenic	not near genes	chrX_4_22215001	chrX_22215001	0.75	RAL-340_100b
1899	chrX	22218786	22218861	1360	224	279	12	75	'3-9	69.05	8.8	1.2	intergenic	not near genes	chrX_12_22215001	chrX_22215001	0.25	RAL-340_100b
1900	chrX	22252752	22252867	297	380	3	18	115	'8-10	66.88	5.5	2.8	intergenic	not near genes	chrX_18_22250001	chrX_22250001	0.44	RAL-340_100b
1901	chrX	22255840	22255885	Tc1-2	73	209	5	45	'2-3	71.99	13.2	0.4	intergenic	not near genes	chrX_5_22255001	chrX_22255001	0.40	RAL-340_100b
1902	chrX	22404346	22404393	G4	114	50	6	47	'2-4	64.94	20.6	0.3	intergenic	not near genes	chrX_6_22400001	chrX_22400001	0.33	RAL-340_100b
1903	chrX	22472598	22472792	S2	7	116	18	194	'5-13	67.46	9.9	1.7	intergenic	not near genes	chrX_18_22470001	chrX_22470001	0.28	RAL-340_100b
1904	chrX	22484900	22485101	INE-1	132	543	16	201	'2-14	75.25	13.1	1.1	intron	Cp110 +	chrX_16_22480001	chrX_22480001	0.12	RAL-340_100b
1905	chrX	22509706	22509760	HB	196	206	7	54	'1-6	76.79	5.2	1.1	intergenic	not near genes	chrX_7_22505001	chrX_22505001	0.14	RAL-340_100b
1906	chrX	22513653	22513697	INE-1	213	311	4	44	'3-1	57.11	18.5	0.2	intergenic	not near genes	chrX_4_22510001	chrX_22510001	0.75	RAL-340_100b
1907	chrX	22522561	22522610	FB	90	157	7	49	'2-5	72.46	22.5	0.3	intron	CG17600 +	chrX_7_22520001	chrX_22520001	0.29	RAL-340_100b
1908	chrX	22525448	22525590	FB	1	19	9	142	'3-6	67.70	13.1	0.6	intron	CG17600 +	chrX_9_22525001	chrX_22525001	0.33	RAL-340_100b
1909	chrX	22556529	22556607	transib2	70	164	8	78	'3-5	68.16	13.5	0.6	intergenic	not near genes	chrX_8_22555001	chrX_22555001	0.38	RAL-340_100b
1910	chrX	22575790	22575975	Burdock	133	13	43	185	'11-32	67.87	11.4	3.5	intergenic	not near genes	chrX_43_22575001	chrX_22575001	0.26	RAL-340_100b
1911	chrX	22591965	22592058	INE-1	580	500	5	93	'2-3	67.72	16.0	0.3	intron	Cda4 -	chrX_5_22590001	chrX_22590001	0.40	RAL-340_100b
1912	chrX	22620460	22620491	mdg1	7068	7067	5	31	'2-3	74.25	9.6	0.5	intron	Cda4 -	chrX_5_22620001	chrX_22620001	0.40	RAL-340_100b
1913	chrX	22629563	22629612	INE-1	569	581	4	49	'2-2	71.25	34.4	0.1	intron	Cda4 -	chrX_4_22625001	chrX_22625001	0.50	RAL-340_100b
1914	chrX	22651444	22651473	INE-1	86	82	17	29	'9-8	71.74	4.6	3.0	intergenic	not near genes	chrX_17_22650001	chrX_22650001	0.53	RAL-340_100b
1915	chrX	22727997	22728134	1360	74	39	6	137	'4-2	71.86	15.1	0.4	intron	CR44997 +	chrX_6_22725001	chrX_22725001	0.67	RAL-340_100b
1916	chrX	22739071	22739140	297	6841	6830	6	69	'2-4	72.44	19.3	0.3	intron	CR44997 +	chrX_6_22735001	chrX_22735001	0.33	RAL-340_100b
1917	chrX	22841750	22841906	HB	6	198	8	156	'3-5	68.97	14.4	0.5	intron,intron	fog -,CG42346 +	chrX_8_22840001	chrX_22840001	0.38	RAL-340_100b
1918	chrX	22900317	22900486	Tc1	1345	1518	8	169	'3-5	71.50	10.4	0.7	intergenic	not near genes	chrX_8_22900001	chrX_22900001	0.38	RAL-340_100b
1919	chrX	22908591	22908678	gypsy7	5396	5356	4	87	'3-1	77.87	14.4	0.3	intergenic	not near genes	chrX_4_22905001	chrX_22905001	0.75	RAL-340_100b
1920	chrX	22913192	22913339	gypsy7	5242	47	5	147	'4-1	63.02	5.9	0.7	intergenic	not near genes	chrX_5_22910001	chrX_22910001	0.80	RAL-340_100b
1921	chrX	22924586	22924693	Tc1-2	1587	1512	8	107	'5-3	63.90	20.0	0.4	intergenic	not near genes	chrX_8_22920001	chrX_22920001	0.62	RAL-340_100b
1922	chrX	22938727	22938836	Cr1a	4291	4221	10	109	'2-8	66.83	12.7	0.7	intergenic	not near genes	chrX_10_22935001	chrX_22935001	0.20	RAL-340_100b
1923	chrX	22969439	22969635	roo	76	8841	24	196	'4-20	66.90	4.7	4.2	intergenic	not near genes	chrX_24_22965001	chrX_22965001	0.17	RAL-340_100b
1924	chrX	23005346	23005472	INE-1	29	373	5	126	'1-4	67.40	12.3	0.4	intergenic	not near genes	chrX_5_23005001	chrX_23005001	0.20	RAL-340_100b
1925	chrX	23016659	23016722	Tc1	146	195	11	63	'10-1	73.52	15.3	0.7	intergenic	CG13865 +	chrX_11_23015001	chrX_23015001	0.91	RAL-340_100b
1926	chrX	23036310	23036398	pogo	2041	41	7	88	'3-4	70.69	13.9	0.5	intron	CG12061 +	chrX_7_23035001	chrX_23035001	0.43	RAL-340_100b
1927	chrX	23040915	23041003	Tc1	1524	1544	8	88	'7-1	70.38	12.1	0.6	intron	CG12061 +	chrX_8_23040001	chrX_23040001	0.88	RAL-340_100b
1928	chrX	23043006	23043117	mariner2	206	47	10	111	'3-7	73.02	13.4	0.7	intron	CG12061 +	chrX_10_23040001	chrX_23040001	0.30	RAL-340_100b
1929	chrX	23090544	23090870	INE-1	577	297	5	326	'3-2	69.83	23.8	0.2	intron,intron,intron	CG17159 -,CG17162 -,CR43480 +	chrX_5_23090001	chrX_23090001	0.60	RAL-340_100b
1930	chrX	23104487	23104648	1360	3269	3356	30	161	'6-24	66.45	18.0	1.6	intergenic	not near genes	chrX_30_23100001	chrX_23100001	0.20	RAL-340_100b
1931	chrX	23108296	23108343	BS3	1431	1636	31	47	'16-15	58.24	15.1	1.9	3` UTR	ATbp +	chrX_31_23105001	chrX_23105001	0.52	RAL-340_100b
1932	chrY	311341	311462	1360	12	2	9	121	'8-1	58.06	1.9	3.1	intergenic	not near genes	chrY_9_310001	chrY_310001	0.89	RAL-340_100b
1933	chrY	864552	864590	INE-1	8	33	4	38	'1-3	64.32	11.8	0.3	intergenic	not near genes	chrY_4_860001	chrY_860001	0.25	RAL-340_100b
1934	chrY	865801	865994	INE-1	499	546	4	193	'2-2	75.56	14.2	0.3	intergenic	not near genes	chrY_4_865001	chrY_865001	0.50	RAL-340_100b
1935	chrY	887307	887468	1360	3388	218	11	161	'2-9	71.90	68.9	0.2	intergenic	not near genes	chrY_11_885001	chrY_885001	0.18	RAL-340_100b
1936	chrY	975825	975961	1360	3369	3381	5	136	'4-1	64.44	92.2	0.1	intergenic	not near genes	chrY_5_975001	chrY_975001	0.80	RAL-340_100b
1937	chrY	978550	978628	1360	66	3373	4	78	'2-2	70.78	20.2	0.2	intergenic	not near genes	chrY_4_975001	chrY_975001	0.50	RAL-340_100b
1938	chrY	1447402	1447545	G2	3061	3066	14	143	'3-11	58.05	13.7	1.0	intergenic	not near genes	chrY_14_1445001	chrY_1445001	0.21	RAL-340_100b
1939	chrY	2468606	2468686	R1A1-element	208	276	4	80	'3-1	73.79	0.0	4.0	intergenic	not near genes	chrY_4_2465001	chrY_2465001	0.75	RAL-340_100b
1940	chrY	2617209	2617332	Max-element	8275	140	4	123	'1-3	73.51	4.9	0.7	intergenic	not near genes	chrY_4_2615001	chrY_2615001	0.25	RAL-340_100b
1941	chrY	2720356	2720388	1360	3239	3199	8	32	'4-4	66.75	0.7	4.7	intergenic	not near genes	chrY_8_2720001	chrY_2720001	0.50	RAL-340_100b
1942	chrY	3239710	3239783	pogo	23	1957	4	73	'2-2	64.08	5.8	0.6	intergenic	not near genes	chrY_4_3235001	chrY_3235001	0.50	RAL-340_100b
1943	chrY	3272339	3272402	Tirant	42	8482	4	63	'2-2	66.30	9.8	0.4	intergenic	not near genes	chrY_4_3270001	chrY_3270001	0.50	RAL-340_100b
1944	chrY	3648861	3648932	Stalker4	488	266	10	71	'9-1	66.95	1.5	4.0	intergenic	not near genes	chrY_10_3645001	chrY_3645001	0.90	RAL-340_100b
1945	chrY	3648879	3648926	297	368	237	10	47	'6-4	68.72	1.7	3.7	intergenic	not near genes	chrY_10_3645001	chrY_3645001	0.60	RAL-340_100b