SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 1243357 1243438 Max-element 8232 300 7 81 '3-4 65.85 6.2 1.0 intergenic CG5397 + chr2L_7_1240001 chr2L_1240001 0.43 RAL-325 2 chr2L 1990329 1990403 Tabor 7322 5 11 74 '4-7 63.27 3.6 2.4 5` UTR CR42874 + chr2L_11_1990001 chr2L_1990001 0.36 RAL-325 3 chr2L 2784220 2784272 1360 7 5 8 52 '3-5 66.63 4.2 1.5 intron Syt1 - chr2L_8_2780001 chr2L_2780001 0.38 RAL-325 4 chr2L 2921197 2921258 FB 6 1 6 61 '3-3 61.95 1.6 2.3 intron lilli + chr2L_6_2920001 chr2L_2920001 0.50 RAL-325 5 chr2L 4432457 4432534 roo 8664 408 12 77 '7-5 63.12 1.5 4.8 intron CG15431 - chr2L_12_4430001 chr2L_4430001 0.58 RAL-325 6 chr2L 4997851 4997913 Burdock 6148 249 7 62 '3-4 64.70 3.5 1.6 intron Rtnl1 - chr2L_7_4995001 chr2L_4995001 0.43 RAL-325 7 chr2L 5107863 5107936 Tirant 403 8111 15 73 '8-7 65.63 3.3 3.5 intron Msp300 + chr2L_15_5105001 chr2L_5105001 0.53 RAL-325 8 chr2L 5535831 5535897 roo 8663 9055 9 66 '5-4 69.33 4.2 1.7 3` UTR Cap-D3 + chr2L_9_5535001 chr2L_5535001 0.56 RAL-325 9 chr2L 6167543 6167616 copia 254 1 15 73 '3-12 65.75 4.8 2.6 intergenic not near genes chr2L_15_6165001 chr2L_6165001 0.20 RAL-325 10 chr2L 6340133 6340196 roo 403 8676 10 63 '8-2 63.77 2.3 3.0 intron Cpr + chr2L_10_6340001 chr2L_6340001 0.80 RAL-325 11 chr2L 6505370 6505427 412 7542 19 8 57 '5-3 59.51 1.3 3.5 intron CG31637 + chr2L_8_6505001 chr2L_6505001 0.62 RAL-325 12 chr2L 6684532 6684590 P-element 2883 2873 7 58 '5-2 49.60 3.9 1.4 intergenic Nhe3 -,CG11327 - chr2L_7_6680001 chr2L_6680001 0.71 RAL-325 13 chr2L 6833906 6833975 hopper 3 1411 14 69 '4-10 65.68 2.9 3.6 intron sens-2 + chr2L_14_6830001 chr2L_6830001 0.29 RAL-325 14 chr2L 7906570 7906646 roo 9071 2 9 76 '5-4 65.00 2.3 2.7 intron Snoo - chr2L_9_7905001 chr2L_7905001 0.56 RAL-325 15 chr2L 7946080 7946156 roo 8663 404 8 76 '4-4 70.61 1.5 3.2 intron Snoo - chr2L_8_7945001 chr2L_7945001 0.50 RAL-325 16 chr2L 8266051 8266110 Stalker2 7247 393 5 59 '2-3 58.50 0.7 2.9 intron Btk29A - chr2L_5_8265001 chr2L_8265001 0.40 RAL-325 17 chr2L 8326383 8326462 opus 498 2 5 79 '2-3 65.96 5.3 0.8 intergenic not near genes chr2L_5_8325001 chr2L_8325001 0.40 RAL-325 18 chr2L 8521486 8521541 pogo 2098 22 13 55 '7-6 73.30 2.9 3.3 exon CG13091 + chr2L_13_8520001 chr2L_8520001 0.54 RAL-325 19 chr2L 10476587 10476609 hobo 31 10 6 22 '4-2 64.89 1.7 2.2 intergenic RluA-2 + chr2L_6_10475001 chr2L_10475001 0.67 RAL-325 20 chr2L 10964340 10964433 roo 8662 404 11 93 '5-6 61.36 2.1 3.5 intergenic dpr2 - chr2L_11_10960001 chr2L_10960001 0.45 RAL-325 21 chr2L 11061369 11061448 Tirant 8110 403 16 79 '6-10 67.62 4.1 3.1 intron Samuel - chr2L_16_11060001 chr2L_11060001 0.38 RAL-325 22 chr2L 11280509 11280566 412 15 7538 16 57 '8-8 61.80 3.9 3.3 3` UTR,exon CR44182 -,Ppt2 + chr2L_16_11280001 chr2L_11280001 0.50 RAL-325 23 chr2L 11855219 11855249 hobo 1 27 5 30 '1-4 69.68 5.4 0.8 intron Pde1c - chr2L_5_11855001 chr2L_11855001 0.20 RAL-325 24 chr2L 12381914 12381935 roo 6 8690 7 21 '2-5 63.15 4.4 1.3 intron bru-2 + chr2L_7_12380001 chr2L_12380001 0.29 RAL-325 25 chr2L 12455201 12455259 jockey 4669 4987 8 58 '5-3 65.33 2.0 2.7 intergenic bun - chr2L_8_12455001 chr2L_12455001 0.62 RAL-325 26 chr2L 12823021 12823090 hobo 2 2937 8 69 '5-3 65.99 3.9 1.6 intergenic kek1 - chr2L_8_12820001 chr2L_12820001 0.62 RAL-325 27 chr2L 13463961 13463981 jockey 34 14 4 20 '3-1 63.02 5.2 0.6 intron CG42784 + chr2L_4_13460001 chr2L_13460001 0.75 RAL-325 28 chr2L 13465866 13465945 412 7545 1 17 79 '10-7 66.20 3.5 3.8 intron CG42784 + chr2L_17_13465001 chr2L_13465001 0.59 RAL-325 29 chr2L 13916157 13916233 1360 3388 3388 15 76 '8-7 65.88 2.4 4.4 intron Ance-3 + chr2L_15_13915001 chr2L_13915001 0.53 RAL-325 30 chr2L 14022810 14022835 Doc 4513 4540 5 25 '2-3 60.60 2.2 1.6 intergenic not near genes chr2L_5_14020001 chr2L_14020001 0.40 RAL-325 31 chr2L 14111642 14111715 roo 408 3 9 73 '2-7 69.30 1.4 3.8 intergenic not near genes chr2L_9_14110001 chr2L_14110001 0.22 RAL-325 32 chr2L 14253486 14253534 1360 3384 25 4 48 '1-3 71.70 0.6 2.5 intergenic not near genes chr2L_4_14250001 chr2L_14250001 0.25 RAL-325 33 chr2L 14599921 14600000 opus 7499 1 13 79 '6-7 68.79 4.0 2.6 3` UTR osp - chr2L_13_14595001 chr2L_14595001 0.46 RAL-325 34 chr2L 14745546 14745605 copia 1 236 7 59 '5-2 62.61 2.4 2.1 intergenic CR45460 -,CR45459 +,CG42587 - chr2L_7_14745001 chr2L_14745001 0.71 RAL-325 35 chr2L 14945715 14945794 roo 407 8664 5 79 '4-1 63.99 1.6 1.9 intron CG42313 - chr2L_5_14945001 chr2L_14945001 0.80 RAL-325 36 chr2L 15974004 15974033 ZAM 455 441 8 29 '4-4 63.48 5.5 1.2 intergenic not near genes chr2L_8_15970001 chr2L_15970001 0.50 RAL-325 37 chr2L 16350822 16350898 pogo 1 2098 7 76 '3-4 65.51 3.5 1.6 intron,intron CG42231 -,chif - chr2L_7_16350001 chr2L_16350001 0.43 RAL-325 38 chr2L 16534532 16534573 Tirant 8139 8495 7 41 '2-5 66.57 3.3 1.6 intergenic CR45354 -,CR45355 - chr2L_7_16530001 chr2L_16530001 0.29 RAL-325 39 chr2L 17095467 17095508 hopper 25 3 11 41 '6-5 66.52 2.8 2.9 intergenic not near genes chr2L_11_17095001 chr2L_17095001 0.55 RAL-325 40 chr2L 17108414 17108443 copia 31 4872 4 29 '3-1 70.33 2.3 1.2 intergenic not near genes chr2L_4_17105001 chr2L_17105001 0.75 RAL-325 41 chr2L 17131075 17131125 hobo 2921 10 5 50 '2-3 59.56 1.8 1.8 5` UTR,5` UTR CG34106 +,beat-IIIa + chr2L_5_17130001 chr2L_17130001 0.40 RAL-325 42 chr2L 17135820 17135862 hobo 2922 15 7 42 '4-3 65.62 2.3 2.1 intron,intron CG34106 +,beat-IIIa + chr2L_7_17135001 chr2L_17135001 0.57 RAL-325 43 chr2L 17478172 17478206 Juan 8 4202 6 34 '3-3 57.82 2.1 1.9 intergenic fws -,Aac11 - chr2L_6_17475001 chr2L_17475001 0.50 RAL-325 44 chr2L 18406381 18406441 hobo 1 2936 11 60 '5-6 60.71 2.7 3.0 intergenic not near genes chr2L_11_18405001 chr2L_18405001 0.45 RAL-325 45 chr2L 18570496 18570546 FB 17 9 7 50 '2-5 61.28 0.0 7.0 intron Pde11 - chr2L_7_18570001 chr2L_18570001 0.29 RAL-325 46 chr2L 18749840 18749905 pogo 2094 4 8 65 '6-2 65.83 1.7 3.0 intergenic not near genes chr2L_8_18745001 chr2L_18745001 0.75 RAL-325 47 chr2L 19129337 19129388 FB 11 10 4 51 '1-3 59.34 3.9 0.8 intergenic l(2)37Cd +,Aats-asn - chr2L_4_19125001 chr2L_19125001 0.25 RAL-325 48 chr2L 19203879 19203944 mdg1 7451 1 5 65 '3-2 60.63 3.2 1.2 intron drl + chr2L_5_19200001 chr2L_19200001 0.60 RAL-325 49 chr2L 19290042 19290075 Doc 283 317 5 33 '3-2 63.46 7.5 0.6 intergenic not near genes chr2L_5_19290001 chr2L_19290001 0.60 RAL-325 50 chr2L 19363898 19363925 pogo 32 6 4 27 '2-2 71.64 4.5 0.7 intergenic CG13086 + chr2L_4_19360001 chr2L_19360001 0.50 RAL-325 51 chr2L 19483593 19483666 gtwin 7386 3 13 73 '7-6 62.61 5.5 2.0 exon CG10195 - chr2L_13_19480001 chr2L_19480001 0.54 RAL-325 52 chr2L 19572194 19572271 Burdock 6136 255 5 77 '1-4 66.88 2.2 1.6 intron spi - chr2L_5_19570001 chr2L_19570001 0.20 RAL-325 53 chr2L 19799724 19799776 roo 15 396 8 52 '4-4 58.44 9.0 0.8 intron sick + chr2L_8_19795001 chr2L_19795001 0.50 RAL-325 54 chr2L 19846247 19846310 HMS-Beagle 5 235 4 63 '2-2 63.51 2.6 1.1 intron sick + chr2L_4_19845001 chr2L_19845001 0.50 RAL-325 55 chr2L 20097833 20097863 P-element 2 2860 6 30 '3-3 49.97 6.8 0.8 intron Kua + chr2L_6_20095001 chr2L_20095001 0.50 RAL-325 56 chr2L 20293082 20293163 pogo 1 2099 10 81 '4-6 70.94 3.0 2.5 intergenic not near genes chr2L_10_20290001 chr2L_20290001 0.40 RAL-325 57 chr2L 20385281 20385360 Transpac 4918 308 10 79 '5-5 66.72 4.1 2.0 intergenic CG10947 - chr2L_10_20385001 chr2L_20385001 0.50 RAL-325 58 chr2L 20941879 20941943 Max-element 6 8526 5 64 '3-2 60.97 3.4 1.1 intergenic not near genes chr2L_5_20940001 chr2L_20940001 0.60 RAL-325 59 chr2L 21360413 21360484 HMS-Beagle2 7186 6884 9 71 '6-3 63.73 3.2 2.1 intergenic not near genes chr2L_9_21360001 chr2L_21360001 0.67 RAL-325 60 chr2L 21954623 21954672 roo 8682 401 4 49 '1-3 65.66 4.4 0.7 intergenic not near genes chr2L_4_21950001 chr2L_21950001 0.25 RAL-325 61 chr2L 22054747 22054809 Transpac 311 4937 4 62 '1-3 64.27 1.6 1.5 intergenic CG34173 - chr2L_4_22050001 chr2L_22050001 0.25 RAL-325 62 chr2L 22369169 22369239 opus 7485 112 4 70 '1-3 64.89 0.8 2.2 intergenic CG17018 + chr2L_4_22365001 chr2L_22365001 0.25 RAL-325 63 chr2R 1320688 1320710 diver2 366 4885 5 22 '2-3 51.48 14.7 0.3 intergenic not near genes chr2R_5_1320001 chr2R_1320001 0.40 RAL-325 64 chr2R 4166353 4166414 gypsy 7428 6987 4 61 '1-3 63.85 6.8 0.5 intergenic not near genes chr2R_4_4165001 chr2R_4165001 0.25 RAL-325 65 chr2R 5179590 5179660 1360 6 3 4 70 '3-1 71.59 1.5 1.6 intron Nipped-A - chr2R_4_5175001 chr2R_5175001 0.75 RAL-325 66 chr2R 5914533 5914589 opus 24 7500 9 56 '6-3 66.82 9.1 0.9 intron CG43366 + chr2R_9_5910001 chr2R_5910001 0.67 RAL-325 67 chr2R 6191335 6191397 opus 7495 11 7 62 '5-2 64.78 5.5 1.1 intron Ptr - chr2R_7_6190001 chr2R_6190001 0.71 RAL-325 68 chr2R 6236293 6236311 1360 3 21 4 18 '3-1 65.33 13.5 0.3 intron bin3 + chr2R_4_6235001 chr2R_6235001 0.75 RAL-325 69 chr2R 6578758 6578823 roo 402 8671 9 65 '5-4 66.87 6.6 1.2 intron jing + chr2R_9_6575001 chr2R_6575001 0.56 RAL-325 70 chr2R 6687015 6687086 roo 8664 9067 10 71 '7-3 66.15 5.3 1.6 intron,intron CG9422 +,Tdc2 - chr2R_10_6685001 chr2R_6685001 0.70 RAL-325 71 chr2R 6715022 6715081 blood 356 7009 9 59 '2-7 61.50 5.1 1.5 intron,intron CG3409 -,CG45092 - chr2R_9_6715001 chr2R_6715001 0.22 RAL-325 72 chr2R 6759117 6759184 copia 257 3 7 67 '5-2 63.64 3.8 1.5 intergenic CG9436 - chr2R_7_6755001 chr2R_6755001 0.71 RAL-325 73 chr2R 7095812 7095889 blood 370 7005 6 77 '2-4 68.27 6.6 0.8 intron esn + chr2R_6_7095001 chr2R_7095001 0.33 RAL-325 74 chr2R 7202788 7202828 copia 4890 241 4 40 '2-2 62.97 7.4 0.5 intron pk + chr2R_4_7200001 chr2R_7200001 0.50 RAL-325 75 chr2R 7380326 7380400 3S18 6103 5766 10 74 '4-6 64.28 4.2 1.9 intron Dscam1 - chr2R_10_7380001 chr2R_7380001 0.40 RAL-325 76 chr2R 8086875 8086947 1360 3384 3388 4 72 '2-2 65.88 6.0 0.6 3` UTR sut1 + chr2R_4_8085001 chr2R_8085001 0.50 RAL-325 77 chr2R 8087244 8087307 copia 245 5 4 63 '1-3 59.67 3.5 0.9 intergenic sut1 +,sut2 + chr2R_4_8085001 chr2R_8085001 0.25 RAL-325 78 chr2R 8306770 8306795 copia 234 250 4 25 '1-3 60.52 3.4 0.9 intergenic not near genes chr2R_4_8305001 chr2R_8305001 0.25 RAL-325 79 chr2R 8351808 8351868 1360 13 3385 6 60 '2-4 65.84 3.6 1.3 intron pdm3 + chr2R_6_8350001 chr2R_8350001 0.33 RAL-325 80 chr2R 8642903 8642962 Doc2-element 4766 4698 7 59 '2-5 56.73 4.2 1.3 intergenic not near genes chr2R_7_8640001 chr2R_8640001 0.29 RAL-325 81 chr2R 8777774 8777853 Stalker2 4 405 6 79 '4-2 61.42 2.9 1.5 intergenic not near genes chr2R_6_8775001 chr2R_8775001 0.67 RAL-325 82 chr2R 8861987 8862046 1360 5 10 5 59 '3-2 61.39 4.9 0.8 intron RyR + chr2R_5_8860001 chr2R_8860001 0.60 RAL-325 83 chr2R 9139069 9139093 P-element 26 2882 5 24 '3-2 44.16 9.6 0.5 5` UTR,5` UTR CG44286 +,CG8788 + chr2R_5_9135001 chr2R_9135001 0.60 RAL-325 84 chr2R 9227820 9227875 1360 3385 3370 7 55 '5-2 63.58 6.2 1.0 3` UTR hig - chr2R_7_9225001 chr2R_9225001 0.71 RAL-325 85 chr2R 9315145 9315212 roo 8665 402 9 67 '3-6 65.19 8.3 1.0 intron,intron CG13739 -,CG13954 - chr2R_9_9315001 chr2R_9315001 0.33 RAL-325 86 chr2R 9440620 9440664 pogo 19 2082 4 44 '1-3 69.93 3.8 0.8 intron ced-6 - chr2R_4_9440001 chr2R_9440001 0.25 RAL-325 87 chr2R 9763689 9763759 hobo 4 2936 9 70 '8-1 65.68 7.9 1.0 exon trpl + chr2R_9_9760001 chr2R_9760001 0.89 RAL-325 88 chr2R 9813220 9813275 1360 17 5 7 55 '3-4 68.85 3.8 1.5 intron CG1648 - chr2R_7_9810001 chr2R_9810001 0.43 RAL-325 89 chr2R 9870964 9871030 roo 8676 406 7 66 '4-3 64.64 2.4 2.1 intron cbx - chr2R_7_9870001 chr2R_9870001 0.57 RAL-325 90 chr2R 9968364 9968427 1360 3385 2 5 63 '3-2 54.72 4.5 0.9 3` UTR CG12133 + chr2R_5_9965001 chr2R_9965001 0.60 RAL-325 91 chr2R 10613550 10613641 roo 405 8670 5 91 '1-4 69.87 3.2 1.2 intron psq + chr2R_5_10610001 chr2R_10610001 0.20 RAL-325 92 chr2R 10701376 10701403 mdg3 5283 5257 5 27 '2-3 70.38 6.3 0.7 intron stan + chr2R_5_10700001 chr2R_10700001 0.40 RAL-325 93 chr2R 11005771 11005803 hobo 2926 25 5 32 '3-2 70.21 5.5 0.8 intron luna - chr2R_5_11005001 chr2R_11005001 0.60 RAL-325 94 chr2R 11049689 11049763 roo 8665 405 7 74 '3-4 69.40 4.5 1.3 intron luna - chr2R_7_11045001 chr2R_11045001 0.43 RAL-325 95 chr2R 11110372 11110399 412 495 477 4 27 '3-1 67.08 1.8 1.4 intron luna - chr2R_4_11110001 chr2R_11110001 0.75 RAL-325 96 chr2R 11277493 11277540 412 18 7531 8 47 '5-3 71.20 6.0 1.1 intergenic Cpr47Eg - chr2R_8_11275001 chr2R_11275001 0.62 RAL-325 97 chr2R 11615480 11615544 HMS-Beagle 5 235 8 64 '5-3 61.61 3.1 2.0 intron tou - chr2R_8_11615001 chr2R_11615001 0.62 RAL-325 98 chr2R 11688549 11688612 412 7544 7069 11 63 '8-3 63.43 6.1 1.5 exon Buffy + chr2R_11_11685001 chr2R_11685001 0.73 RAL-325 99 chr2R 11847835 11847899 Burdock 6147 252 4 64 '1-3 64.91 0.5 2.7 intron Sln + chr2R_4_11845001 chr2R_11845001 0.25 RAL-325 100 chr2R 11937218 11937287 roo 404 6 5 69 '2-3 64.81 1.5 2.0 intergenic not near genes chr2R_5_11935001 chr2R_11935001 0.40 RAL-325 101 chr2R 12728910 12728933 Doc 2 25 4 23 '1-3 62.61 2.0 1.3 intron CG42663 + chr2R_4_12725001 chr2R_12725001 0.25 RAL-325 102 chr2R 12761277 12761338 copia 253 16 6 61 '4-2 68.97 3.0 1.5 intergenic Nacalpha - chr2R_6_12760001 chr2R_12760001 0.67 RAL-325 103 chr2R 13132550 13132606 jockey 4980 4522 6 56 '3-3 63.61 4.0 1.2 intergenic CG13326 - chr2R_6_13130001 chr2R_13130001 0.50 RAL-325 104 chr2R 13435474 13435543 gtwin 476 6928 6 69 '3-3 59.63 2.4 1.8 intron CG42321 - chr2R_6_13435001 chr2R_13435001 0.50 RAL-325 105 chr2R 13509416 13509486 pogo 2097 8 7 70 '3-4 66.88 4.2 1.3 intron mip120 + chr2R_7_13505001 chr2R_13505001 0.43 RAL-325 106 chr2R 13588520 13588597 opus 7115 499 8 77 '4-4 68.04 2.7 2.2 intron,intron CG6191 -,CG45088 - chr2R_8_13585001 chr2R_13585001 0.50 RAL-325 107 chr2R 13640762 13640784 BS 24 5 4 22 '2-2 67.69 3.3 0.9 intron fas + chr2R_4_13640001 chr2R_13640001 0.50 RAL-325 108 chr2R 13774201 13774237 blood 7368 15 4 36 '1-3 63.23 3.6 0.9 exon Cpr50Ca + chr2R_4_13770001 chr2R_13770001 0.25 RAL-325 109 chr2R 14434280 14434333 pogo 2083 13 5 53 '2-3 64.58 4.9 0.8 intergenic CR45277 - chr2R_5_14430001 chr2R_14430001 0.40 RAL-325 110 chr2R 14582090 14582133 jockey 4986 4685 7 43 '3-4 56.54 7.7 0.8 intron ttv + chr2R_7_14580001 chr2R_14580001 0.43 RAL-325 111 chr2R 15387874 15387939 roo 9055 8662 6 65 '5-1 69.76 3.2 1.4 intergenic SRPK + chr2R_6_15385001 chr2R_15385001 0.83 RAL-325 112 chr2R 16037469 16037489 BS 13 4 4 20 '2-2 59.56 8.7 0.4 intron SP2353 + chr2R_4_16035001 chr2R_16035001 0.50 RAL-325 113 chr2R 16074679 16074728 roo 4 397 4 49 '3-1 61.69 7.1 0.5 intergenic not near genes chr2R_4_16070001 chr2R_16070001 0.75 RAL-325 114 chr2R 16242099 16242160 HMS-Beagle 6799 228 6 61 '3-3 65.23 5.4 0.9 intergenic CG15708 - chr2R_6_16240001 chr2R_16240001 0.50 RAL-325 115 chr2R 16374401 16374441 hobo 2937 24 6 40 '4-2 64.28 4.3 1.1 intergenic not near genes chr2R_6_16370001 chr2R_16370001 0.67 RAL-325 116 chr2R 16464830 16465163 hobo 14 7 10 333 '3-7 58.85 1.5 4.0 intergenic not near genes chr2R_10_16460001 chr2R_16460001 0.30 RAL-325 117 chr2R 16474461 16474478 hobo 7 24 4 17 '1-3 60.88 8.6 0.4 intergenic not near genes chr2R_4_16470001 chr2R_16470001 0.25 RAL-325 118 chr2R 16778806 16778870 roo 399 6 7 64 '1-6 61.45 2.6 1.9 exon Vkor + chr2R_7_16775001 chr2R_16775001 0.14 RAL-325 119 chr2R 17468077 17468152 412 9 496 4 75 '2-2 64.67 7.8 0.5 exon Tes - chr2R_4_17465001 chr2R_17465001 0.50 RAL-325 120 chr2R 17599622 17599698 blood 7010 7387 8 76 '5-3 58.66 4.8 1.4 intron lack + chr2R_8_17595001 chr2R_17595001 0.62 RAL-325 121 chr2R 17897888 17897941 Burdock 29 255 6 53 '2-4 70.30 0.8 3.3 intron Elk + chr2R_6_17895001 chr2R_17895001 0.33 RAL-325 122 chr2R 18657463 18657547 opus 499 112 9 84 '5-4 65.57 4.1 1.8 intron SP2637 - chr2R_9_18655001 chr2R_18655001 0.56 RAL-325 123 chr2R 18903135 18903186 roo 409 30 4 51 '2-2 76.22 4.1 0.8 intron sano + chr2R_4_18900001 chr2R_18900001 0.50 RAL-325 124 chr2R 18916771 18916856 opus 7112 498 14 85 '6-8 70.04 6.1 2.0 intron sano + chr2R_14_18915001 chr2R_18915001 0.43 RAL-325 125 chr2R 19546967 19547041 opus 5 495 5 74 '2-3 67.46 5.1 0.8 intron sm - chr2R_5_19545001 chr2R_19545001 0.40 RAL-325 126 chr2R 19686843 19686911 roo 398 1 7 68 '3-4 63.96 2.8 1.8 intron CG15128 - chr2R_7_19685001 chr2R_19685001 0.43 RAL-325 127 chr2R 19712326 19712409 blood 7008 377 15 83 '4-11 66.31 3.5 3.3 3` UTR CR44509 - chr2R_15_19710001 chr2R_19710001 0.27 RAL-325 128 chr2R 19988034 19988087 roo 26 407 6 53 '1-5 65.33 2.4 1.8 intergenic not near genes chr2R_6_19985001 chr2R_19985001 0.17 RAL-325 129 chr2R 20028870 20028898 F-element 13 11 6 28 '4-2 66.13 1.5 2.4 intergenic not near genes chr2R_6_20025001 chr2R_20025001 0.67 RAL-325 130 chr2R 20209046 20209071 Tirant 405 396 7 25 '6-1 67.11 9.4 0.7 intergenic not near genes chr2R_7_20205001 chr2R_20205001 0.86 RAL-325 131 chr2R 20274536 20274598 P-element 12 3 6 62 '3-3 48.67 15.5 0.4 intergenic CG10444 -,CG11788 + chr2R_6_20270001 chr2R_20270001 0.50 RAL-325 132 chr2R 20496690 20496764 blood 378 6 4 74 '3-1 61.41 1.7 1.5 intergenic not near genes chr2R_4_20495001 chr2R_20495001 0.75 RAL-325 133 chr2R 20565775 20565845 pogo 2093 5 7 70 '5-2 65.17 4.5 1.3 intron qsm - chr2R_7_20565001 chr2R_20565001 0.71 RAL-325 134 chr2R 20868149 20868216 opus 9 492 5 67 '3-2 62.76 4.7 0.9 intergenic IM4 - chr2R_5_20865001 chr2R_20865001 0.60 RAL-325 135 chr2R 20970391 20970448 roo 400 8677 5 57 '2-3 59.76 3.6 1.1 intergenic not near genes chr2R_5_20970001 chr2R_20970001 0.40 RAL-325 136 chr2R 21579595 21579621 Doc 61 36 6 26 '1-5 58.98 5.5 0.9 intergenic not near genes chr2R_6_21575001 chr2R_21575001 0.17 RAL-325 137 chr2R 21581734 21581790 copia 4870 233 4 56 '2-2 73.30 7.2 0.5 intergenic not near genes chr2R_4_21580001 chr2R_21580001 0.50 RAL-325 138 chr2R 21713319 21713372 P-element 7 2883 5 53 '3-2 53.65 5.1 0.8 intron HmgD + chr2R_5_21710001 chr2R_21710001 0.60 RAL-325 139 chr2R 22576325 22576398 roo 401 8661 6 73 '3-3 68.88 2.8 1.6 intron dnr1 - chr2R_6_22575001 chr2R_22575001 0.50 RAL-325 140 chr2R 22989731 22989756 jockey 14 11 4 25 '2-2 63.68 6.2 0.6 intron twi + chr2R_4_22985001 chr2R_22985001 0.50 RAL-325 141 chr2R 22992766 22992798 jockey 4713 4682 6 32 '3-3 57.60 2.7 1.6 intron twi + chr2R_6_22990001 chr2R_22990001 0.50 RAL-325 142 chr2R 23030327 23030399 roo 8669 406 6 72 '1-5 67.38 1.7 2.2 intron,intron twi +,CG42741 - chr2R_6_23030001 chr2R_23030001 0.17 RAL-325 143 chr2R 23972306 23972379 opus 499 2 7 73 '4-3 70.39 5.3 1.1 intergenic CG3065 +,mr + chr2R_7_23970001 chr2R_23970001 0.57 RAL-325 144 chr2R 24021584 24021640 pogo 2 2094 5 56 '2-3 71.41 11.0 0.4 intron CG3907 - chr2R_5_24020001 chr2R_24020001 0.40 RAL-325 145 chr2R 24086311 24086380 pogo 2100 12 5 69 '4-1 66.85 2.9 1.3 intergenic CG16786 +,snama + chr2R_5_24085001 chr2R_24085001 0.80 RAL-325 146 chr2R 24132652 24132674 pogo 4 3 4 22 '1-3 64.75 10.7 0.3 intron tamo - chr2R_4_24130001 chr2R_24130001 0.25 RAL-325 147 chr2R 24388842 24388868 jockey 5 29 4 26 '2-2 61.40 11.3 0.3 intron mAChR-A - chr2R_4_24385001 chr2R_24385001 0.50 RAL-325 148 chr2R 24441765 24441828 roo 9060 3 11 63 '5-6 60.38 5.6 1.7 intergenic not near genes chr2R_11_24440001 chr2R_24440001 0.45 RAL-325 149 chr2R 24442382 24442425 hobo 8 2928 4 43 '3-1 64.78 7.5 0.5 intergenic not near genes chr2R_4_24440001 chr2R_24440001 0.75 RAL-325 150 chr2R 24630955 24631057 297 6594 3 6 102 '3-3 63.28 3.6 1.3 intron,3` UTR CG13594 -,CR43787 - chr2R_6_24630001 chr2R_24630001 0.50 RAL-325 151 chr2R 24886476 24886559 opus 497 7114 9 83 '7-2 68.13 6.7 1.2 intron NKAIN + chr2R_9_24885001 chr2R_24885001 0.78 RAL-325 152 chr3L 470873 470915 roo 3 398 4 42 '1-3 59.05 2.3 1.2 intron klar - chr3L_4_470001 chr3L_470001 0.25 RAL-325 153 chr3L 713719 713795 roo 8664 412 15 76 '5-10 67.28 1.8 5.4 intergenic CR45411 - chr3L_15_710001 chr3L_710001 0.33 RAL-325 154 chr3L 754013 754071 roo 389 8666 19 58 '5-14 66.82 5.0 3.2 intron hng3 - chr3L_19_750001 chr3L_750001 0.26 RAL-325 155 chr3L 937283 937300 F-element 120 119 10 17 '4-6 59.98 5.2 1.6 intron Glut1 + chr3L_10_935001 chr3L_935001 0.40 RAL-325 156 chr3L 1418853 1418924 roo 417 8684 11 71 '4-7 71.33 2.1 3.5 intron Ptp61F - chr3L_11_1415001 chr3L_1415001 0.36 RAL-325 157 chr3L 1586572 1586626 P-element 23 1 8 54 '4-4 41.00 2.5 2.3 intron CG13917 + chr3L_8_1585001 chr3L_1585001 0.50 RAL-325 158 chr3L 1999006 1999060 hobo 4 2927 4 54 '3-1 59.42 3.5 0.9 intergenic not near genes chr3L_4_1995001 chr3L_1995001 0.75 RAL-325 159 chr3L 2209101 2209116 3S18 5767 5774 4 15 '3-1 56.99 2.4 1.2 intergenic not near genes chr3L_4_2205001 chr3L_2205001 0.75 RAL-325 160 chr3L 4109756 4109829 Bari1 4 1700 15 73 '11-4 67.63 3.3 3.5 intron Ack + chr3L_15_4105001 chr3L_4105001 0.73 RAL-325 161 chr3L 5253308 5253328 F-element 12 28 4 20 '3-1 55.49 4.2 0.8 intron shep - chr3L_4_5250001 chr3L_5250001 0.75 RAL-325 162 chr3L 5353712 5353773 1360 7 3382 4 61 '2-2 62.45 2.1 1.3 intron lama - chr3L_4_5350001 chr3L_5350001 0.50 RAL-325 163 chr3L 6114643 6114703 hobo 12 2935 9 60 '7-2 59.10 2.5 2.6 intron Ets65A + chr3L_9_6110001 chr3L_6110001 0.78 RAL-325 164 chr3L 6256552 6256604 P-element 2864 2886 4 52 '1-3 54.39 3.0 1.0 5` UTR Best2 - chr3L_4_6255001 chr3L_6255001 0.25 RAL-325 165 chr3L 6511408 6511438 blood 7010 22 7 30 '2-5 59.87 5.4 1.1 intron sfl + chr3L_7_6510001 chr3L_6510001 0.29 RAL-325 166 chr3L 6678501 6678559 mdg3 5477 5250 7 58 '3-4 69.35 1.5 2.8 intergenic not near genes chr3L_7_6675001 chr3L_6675001 0.43 RAL-325 167 chr3L 6692294 6692365 pogo 5 2094 5 71 '4-1 64.41 2.2 1.6 exon SP1173 - chr3L_5_6690001 chr3L_6690001 0.80 RAL-325 168 chr3L 7130195 7130215 BS 5034 5013 4 20 '1-3 58.38 1.0 2.0 intergenic not near genes chr3L_4_7130001 chr3L_7130001 0.25 RAL-325 169 chr3L 7629558 7629636 opus 7499 7114 14 78 '10-4 62.35 4.9 2.4 intron CG33275 + chr3L_14_7625001 chr3L_7625001 0.71 RAL-325 170 chr3L 7975345 7975392 roo 392 8665 8 47 '3-5 70.06 1.7 3.0 intergenic HP4 -,CG8042 - chr3L_8_7975001 chr3L_7975001 0.38 RAL-325 171 chr3L 8251991 8252069 opus 7113 493 6 78 '1-5 61.87 1.5 2.4 intron Dscam4 + chr3L_6_8250001 chr3L_8250001 0.17 RAL-325 172 chr3L 8395254 8395299 pogo 10 2092 7 45 '2-5 69.25 1.8 2.5 intergenic not near genes chr3L_7_8395001 chr3L_8395001 0.29 RAL-325 173 chr3L 8582127 8582193 roo 399 3 11 66 '5-6 65.23 2.2 3.4 intron CG43078 + chr3L_11_8580001 chr3L_8580001 0.45 RAL-325 174 chr3L 8882914 8882971 hobo 2 2929 13 57 '10-3 65.43 4.7 2.3 intron dally + chr3L_13_8880001 chr3L_8880001 0.77 RAL-325 175 chr3L 9283825 9283889 1360 3381 7 8 64 '4-4 65.77 2.4 2.4 intron GluRIB + chr3L_8_9280001 chr3L_9280001 0.50 RAL-325 176 chr3L 9305982 9306036 roo 23 403 8 54 '2-6 68.41 3.3 1.9 intergenic not near genes chr3L_8_9305001 chr3L_9305001 0.25 RAL-325 177 chr3L 9426690 9426744 P-element 2788 2886 12 54 '8-4 41.57 3.7 2.6 intergenic CG3967 -,Shc + chr3L_12_9425001 chr3L_9425001 0.67 RAL-325 178 chr3L 9992817 9992868 roo 9054 8670 8 51 '1-7 68.08 2.0 2.7 intron dpr6 + chr3L_8_9990001 chr3L_9990001 0.12 RAL-325 179 chr3L 10122454 10122527 412 4 492 19 73 '9-10 62.78 2.7 5.1 intron dpr6 + chr3L_19_10120001 chr3L_10120001 0.47 RAL-325 180 chr3L 10236117 10236187 F-element 4635 4682 6 70 '3-3 60.95 1.3 2.6 intergenic CR44542 + chr3L_6_10235001 chr3L_10235001 0.50 RAL-325 181 chr3L 10450195 10450254 roo 410 8682 7 59 '5-2 62.82 2.0 2.3 intergenic not near genes chr3L_7_10450001 chr3L_10450001 0.71 RAL-325 182 chr3L 10690641 10690677 1360 7 15 5 36 '2-3 69.22 2.0 1.7 3` UTR simj + chr3L_5_10690001 chr3L_10690001 0.40 RAL-325 183 chr3L 11196334 11196375 FB 26 9 4 41 '2-2 68.14 1.6 1.5 intron GlcAT-P - chr3L_4_11195001 chr3L_11195001 0.50 RAL-325 184 chr3L 11447655 11447714 Tabor 478 10 9 59 '5-4 63.61 1.6 3.5 intergenic not near genes chr3L_9_11445001 chr3L_11445001 0.56 RAL-325 185 chr3L 11690685 11690716 hobo 2909 16 5 31 '3-2 67.48 0.6 3.1 intron Pallidin - chr3L_5_11690001 chr3L_11690001 0.60 RAL-325 186 chr3L 11789107 11789124 pogo 2078 2097 5 17 '3-2 66.27 4.5 0.9 intron Pi3K68D - chr3L_5_11785001 chr3L_11785001 0.60 RAL-325 187 chr3L 11850555 11850616 opus 7114 7482 13 61 '4-9 76.35 1.8 4.6 intergenic CG44837 - chr3L_13_11850001 chr3L_11850001 0.31 RAL-325 188 chr3L 11967225 11967289 opus 7500 16 8 64 '5-3 65.19 4.1 1.6 intergenic Muc68E - chr3L_8_11965001 chr3L_11965001 0.62 RAL-325 189 chr3L 12230600 12230654 hobo 2917 2 8 54 '6-2 65.33 3.9 1.6 intron app - chr3L_8_12230001 chr3L_12230001 0.75 RAL-325 190 chr3L 12242515 12242582 copia 242 4868 10 67 '2-8 66.70 2.3 3.0 intron app - chr3L_10_12240001 chr3L_12240001 0.20 RAL-325 191 chr3L 12328091 12328137 I-element 6 5338 6 46 '3-3 60.79 0.4 4.3 intergenic not near genes chr3L_6_12325001 chr3L_12325001 0.50 RAL-325 192 chr3L 12468184 12468246 Tirant 5 403 13 62 '6-7 67.95 4.8 2.2 intergenic eyg - chr3L_13_12465001 chr3L_12465001 0.46 RAL-325 193 chr3L 13104313 13104397 Tirant 400 1 8 84 '5-3 67.83 3.1 2.0 intergenic not near genes chr3L_8_13100001 chr3L_13100001 0.62 RAL-325 194 chr3L 13166342 13166388 Transpac 304 4919 6 46 '4-2 60.29 3.7 1.3 intergenic not near genes chr3L_6_13165001 chr3L_13165001 0.67 RAL-325 195 chr3L 13384397 13384467 pogo 2099 4 10 70 '6-4 66.08 3.4 2.3 intergenic CG14110 +,ImpL1 + chr3L_10_13380001 chr3L_13380001 0.60 RAL-325 196 chr3L 13385861 13385891 flea 4754 4784 8 30 '3-5 69.02 7.4 1.0 exon CG14110 + chr3L_8_13385001 chr3L_13385001 0.38 RAL-325 197 chr3L 13471656 13471678 jockey 4691 4677 7 22 '5-2 59.11 3.0 1.8 intron CG10089 - chr3L_7_13470001 chr3L_13470001 0.71 RAL-325 198 chr3L 13490978 13491042 297 379 6583 5 64 '3-2 70.22 2.6 1.4 intron Tgi + chr3L_5_13490001 chr3L_13490001 0.60 RAL-325 199 chr3L 13540232 13540255 hopper 1411 1386 5 23 '2-3 63.99 1.6 1.9 intron bru-3 - chr3L_5_13540001 chr3L_13540001 0.40 RAL-325 200 chr3L 13789611 13789672 hobo 2933 6 7 61 '4-3 60.38 1.6 2.7 intron bru-3 - chr3L_7_13785001 chr3L_13785001 0.57 RAL-325 201 chr3L 13991553 13991613 hobo 2709 13 12 60 '3-9 67.53 8.3 1.3 intron CG17364 - chr3L_12_13990001 chr3L_13990001 0.25 RAL-325 202 chr3L 14059294 14059363 opus 110 498 15 69 '6-9 66.65 4.4 2.8 intron CG32138 + chr3L_15_14055001 chr3L_14055001 0.40 RAL-325 203 chr3L 14402999 14403033 roo 26 9053 6 34 '2-4 70.75 1.8 2.1 3` UTR stwl - chr3L_6_14400001 chr3L_14400001 0.33 RAL-325 204 chr3L 15027082 15027151 Stalker2 393 7250 9 69 '2-7 64.03 1.0 4.5 intron Sytbeta - chr3L_9_15025001 chr3L_15025001 0.22 RAL-325 205 chr3L 15475035 15475083 roo 409 8663 4 48 '2-2 67.19 2.1 1.3 intergenic not near genes chr3L_4_15475001 chr3L_15475001 0.50 RAL-325 206 chr3L 15641481 15641513 jockey 4691 4670 11 32 '7-4 61.02 2.2 3.4 intron comm3 - chr3L_11_15640001 chr3L_15640001 0.64 RAL-325 207 chr3L 15893589 15893638 hobo 2917 4 14 49 '4-10 61.33 3.8 2.9 intron pHCl - chr3L_14_15890001 chr3L_15890001 0.29 RAL-325 208 chr3L 16379632 16379703 opus 7490 7115 15 71 '4-11 69.66 5.9 2.2 intron CG4753 - chr3L_15_16375001 chr3L_16375001 0.27 RAL-325 209 chr3L 16483988 16484036 Juan 4201 4030 7 48 '1-6 55.09 3.8 1.5 intron CG33158 + chr3L_7_16480001 chr3L_16480001 0.14 RAL-325 210 chr3L 16523216 16523244 jockey 16 10 4 28 '2-2 58.60 0.9 2.1 intron CG43373 - chr3L_4_16520001 chr3L_16520001 0.50 RAL-325 211 chr3L 16632842 16632900 1360 3373 3385 7 58 '2-5 61.84 3.3 1.6 intron Abl - chr3L_7_16630001 chr3L_16630001 0.29 RAL-325 212 chr3L 16755190 16755276 opus 499 7113 12 86 '6-6 66.14 4.0 2.4 intergenic CG42852 + chr3L_12_16755001 chr3L_16755001 0.50 RAL-325 213 chr3L 16881935 16881954 mdg3 5253 5263 6 19 '4-2 59.57 3.6 1.3 intron Lmpt + chr3L_6_16880001 chr3L_16880001 0.67 RAL-325 214 chr3L 17535235 17535304 HMS-Beagle 238 5 10 69 '2-8 64.08 4.1 2.0 intron Nedd4 + chr3L_10_17535001 chr3L_17535001 0.20 RAL-325 215 chr3L 17550691 17550754 3S18 330 5766 7 63 '2-5 56.18 3.8 1.5 3` UTR CG7542 + chr3L_7_17550001 chr3L_17550001 0.29 RAL-325 216 chr3L 17705387 17705464 mdg3 248 5252 10 77 '1-9 64.85 1.6 3.8 intron Ccn + chr3L_10_17705001 chr3L_17705001 0.10 RAL-325 217 chr3L 18189442 18189499 297 11 6968 4 57 '2-2 69.91 3.2 1.0 intergenic not near genes chr3L_4_18185001 chr3L_18185001 0.50 RAL-325 218 chr3L 18643563 18643620 FB 2 18 6 57 '4-2 64.14 0.9 3.2 intron MYPT-75D + chr3L_6_18640001 chr3L_18640001 0.67 RAL-325 219 chr3L 18649194 18649222 F-element 347 367 6 28 '3-3 62.61 2.6 1.7 intron MYPT-75D + chr3L_6_18645001 chr3L_18645001 0.50 RAL-325 220 chr3L 19092659 19092715 P-element 2880 14 5 56 '3-2 44.43 2.3 1.5 intergenic MESR6 + chr3L_5_19090001 chr3L_19090001 0.60 RAL-325 221 chr3L 19349943 19350002 1360 1 3197 8 59 '4-4 59.44 3.5 1.8 intron CG32206 - chr3L_8_19345001 chr3L_19345001 0.50 RAL-325 222 chr3L 19396931 19396949 Doc 17 29 6 18 '3-3 61.10 7.3 0.7 intron CG32206 - chr3L_6_19395001 chr3L_19395001 0.50 RAL-325 223 chr3L 19510610 19510633 297 6581 27 4 23 '2-2 72.27 3.3 0.9 intergenic not near genes chr3L_4_19510001 chr3L_19510001 0.50 RAL-325 224 chr3L 20092572 20092653 opus 2 499 4 81 '1-3 70.66 1.4 1.7 intergenic not near genes chr3L_4_20090001 chr3L_20090001 0.25 RAL-325 225 chr3L 20192290 20192368 mdg3 244 5251 14 78 '7-7 61.42 1.8 5.0 5` UTR CG42674 - chr3L_14_20190001 chr3L_20190001 0.50 RAL-325 226 chr3L 20850133 20850177 Juan 10 4200 7 44 '6-1 58.82 1.3 3.0 intron CG32432 - chr3L_7_20850001 chr3L_20850001 0.86 RAL-325 227 chr3L 21383697 21383734 FB 32 7 6 37 '3-3 67.50 1.2 2.7 intron rgn + chr3L_6_21380001 chr3L_21380001 0.50 RAL-325 228 chr3L 21855062 21855104 roo 9054 8681 6 42 '4-2 70.72 2.8 1.6 intron mub + chr3L_6_21855001 chr3L_21855001 0.67 RAL-325 229 chr3L 21859627 21859672 blood 374 32 10 45 '6-4 63.33 2.6 2.8 intron mub + chr3L_10_21855001 chr3L_21855001 0.60 RAL-325 230 chr3L 22046702 22046727 mdg1 10 7042 4 25 '3-1 58.27 1.6 1.5 intron Oct-TyrR + chr3L_4_22045001 chr3L_22045001 0.75 RAL-325 231 chr3L 22744680 22744700 FB 31 12 5 20 '1-4 72.69 1.4 2.1 intron CG7369 + chr3L_5_22740001 chr3L_22740001 0.20 RAL-325 232 chr3L 23015697 23015773 flea 5012 4754 7 76 '4-3 67.88 2.0 2.3 intron nrm + chr3L_7_23015001 chr3L_23015001 0.57 RAL-325 233 chr3L 23354626 23354652 gypsy2 6488 6512 9 26 '6-3 59.41 4.3 1.7 intergenic not near genes chr3L_9_23350001 chr3L_23350001 0.67 RAL-325 234 chr3L 25323197 25323252 Max-element 8236 277 5 55 '1-4 66.49 2.7 1.4 intergenic not near genes chr3L_5_25320001 chr3L_25320001 0.20 RAL-325 235 chr3L 27415234 27415299 transib2 2814 5 5 65 '4-1 64.29 3.6 1.1 intron Dbp80 + chr3L_5_27415001 chr3L_27415001 0.80 RAL-325 236 chr3R 4403803 4403877 P-element 2886 2884 19 74 '12-7 50.12 5.3 3.0 intron lost + chr3R_19_4400001 chr3R_4400001 0.63 RAL-325 237 chr3R 4610779 4610846 opus 122 7495 11 67 '6-5 66.65 4.5 2.0 intergenic not near genes chr3R_11_4610001 chr3R_4610001 0.55 RAL-325 238 chr3R 5089048 5089124 blood 7011 375 9 76 '6-3 65.02 3.8 1.9 intergenic not near genes chr3R_9_5085001 chr3R_5085001 0.67 RAL-325 239 chr3R 5671395 5671419 1360 6 31 6 24 '3-3 66.28 1.6 2.3 intron Atg17 + chr3R_6_5670001 chr3R_5670001 0.50 RAL-325 240 chr3R 6423947 6424003 1360 3 3380 14 56 '6-8 65.16 5.1 2.3 intron gpp + chr3R_14_6420001 chr3R_6420001 0.43 RAL-325 241 chr3R 6755565 6755629 Tirant 8489 8108 10 64 '3-7 66.57 4.1 2.0 intergenic bcd - chr3R_10_6755001 chr3R_6755001 0.30 RAL-325 242 chr3R 7279672 7279722 hobo 2926 14 6 50 '3-3 61.59 2.3 1.8 intron rn - chr3R_6_7275001 chr3R_7275001 0.50 RAL-325 243 chr3R 7365215 7365289 roo 409 8671 9 74 '2-7 65.52 2.5 2.6 3` UTR Mst84Db - chr3R_9_7365001 chr3R_7365001 0.22 RAL-325 244 chr3R 7482059 7482084 Burdock 257 232 5 25 '2-3 63.84 4.7 0.9 intergenic not near genes chr3R_5_7480001 chr3R_7480001 0.40 RAL-325 245 chr3R 7660933 7661002 opus 7500 10 14 69 '9-5 66.60 3.9 2.9 intron Nlg1 + chr3R_14_7660001 chr3R_7660001 0.64 RAL-325 246 chr3R 8009291 8009353 P-element 10 2885 10 62 '5-5 49.40 3.7 2.1 5` UTR CG11052 - chr3R_10_8005001 chr3R_8005001 0.50 RAL-325 247 chr3R 8354555 8354639 opus 499 7113 19 84 '8-11 67.65 4.3 3.6 intergenic not near genes chr3R_19_8350001 chr3R_8350001 0.42 RAL-325 248 chr3R 9008095 9008121 Juan 6 32 9 26 '3-6 67.14 8.6 0.9 intergenic CG11982 +,CG11983 + chr3R_9_9005001 chr3R_9005001 0.33 RAL-325 249 chr3R 9192540 9192577 invader3 25 5450 4 37 '1-3 57.93 2.5 1.1 intron pum - chr3R_4_9190001 chr3R_9190001 0.25 RAL-325 250 chr3R 9861213 9861277 roo 8664 393 5 64 '3-2 63.94 1.6 1.9 intron Teh1 - chr3R_5_9860001 chr3R_9860001 0.60 RAL-325 251 chr3R 10157760 10157782 pogo 2 24 6 22 '4-2 64.95 9.0 0.6 exon Invadolysin + chr3R_6_10155001 chr3R_10155001 0.67 RAL-325 252 chr3R 10705188 10705271 opus 7115 498 19 83 '7-12 65.88 4.7 3.3 3` UTR CG31467 - chr3R_19_10705001 chr3R_10705001 0.37 RAL-325 253 chr3R 10926931 10926985 roo 397 14 7 54 '4-3 61.63 2.1 2.3 intergenic not near genes chr3R_7_10925001 chr3R_10925001 0.57 RAL-325 254 chr3R 11142209 11142276 Max-element 8245 8535 10 67 '4-6 61.88 3.0 2.5 intergenic not near genes chr3R_10_11140001 chr3R_11140001 0.40 RAL-325 255 chr3R 11494656 11494722 412 6 7538 15 66 '12-3 65.30 3.9 3.1 intergenic not near genes chr3R_15_11490001 chr3R_11490001 0.80 RAL-325 256 chr3R 11597906 11597935 Ivk 5379 5349 4 29 '3-1 64.22 2.3 1.2 intron Jupiter - chr3R_4_11595001 chr3R_11595001 0.75 RAL-325 257 chr3R 11641900 11641969 1360 4 5 17 69 '10-7 69.80 4.7 3.0 intron Csk - chr3R_17_11640001 chr3R_11640001 0.59 RAL-325 258 chr3R 11721513 11721554 hobo 8 2707 4 41 '2-2 59.37 8.4 0.4 intergenic CG12594 + chr3R_4_11720001 chr3R_11720001 0.50 RAL-325 259 chr3R 11939734 11939764 FB 14 3 6 30 '5-1 73.16 1.4 2.5 intron Cad87A - chr3R_6_11935001 chr3R_11935001 0.83 RAL-325 260 chr3R 12047412 12047489 Stalker2 7646 7246 11 77 '7-4 60.46 5.4 1.7 intergenic not near genes chr3R_11_12045001 chr3R_12045001 0.64 RAL-325 261 chr3R 12802453 12802515 blood 10 375 10 62 '9-1 64.14 1.4 4.2 intergenic not near genes chr3R_10_12800001 chr3R_12800001 0.90 RAL-325 262 chr3R 12952867 12952939 opus 490 1 8 72 '4-4 64.49 3.5 1.8 intron grsm - chr3R_8_12950001 chr3R_12950001 0.50 RAL-325 263 chr3R 13456351 13456411 pogo 5 2084 11 60 '5-6 64.46 4.3 2.1 intron,intron CG14372 +,CR17025 - chr3R_11_13455001 chr3R_13455001 0.45 RAL-325 264 chr3R 13508898 13508955 mdg1 7049 415 4 57 '1-3 61.83 1.7 1.5 intergenic not near genes chr3R_4_13505001 chr3R_13505001 0.25 RAL-325 265 chr3R 13975695 13975741 pogo 10 2073 7 46 '6-1 70.46 2.6 1.9 intron rdx - chr3R_7_13975001 chr3R_13975001 0.86 RAL-325 266 chr3R 14147727 14147755 springer 7521 7506 6 28 '4-2 66.28 4.4 1.1 intergenic not near genes chr3R_6_14145001 chr3R_14145001 0.67 RAL-325 267 chr3R 14731204 14731241 P-element 2876 19 7 37 '5-2 44.60 2.0 2.3 5` UTR CG7530 - chr3R_7_14730001 chr3R_14730001 0.71 RAL-325 268 chr3R 14876976 14877038 Tabor 6854 484 9 62 '5-4 63.01 2.6 2.5 intergenic not near genes chr3R_9_14875001 chr3R_14875001 0.56 RAL-325 269 chr3R 15510392 15510427 pogo 19 2072 4 35 '3-1 72.42 2.1 1.3 intergenic CG44013 - chr3R_4_15510001 chr3R_15510001 0.75 RAL-325 270 chr3R 15524401 15524466 pogo 2 2085 4 65 '2-2 62.73 2.7 1.1 intergenic not near genes chr3R_4_15520001 chr3R_15520001 0.50 RAL-325 271 chr3R 15567178 15567216 mdg1 7437 18 5 38 '3-2 71.13 1.5 2.0 intergenic not near genes chr3R_5_15565001 chr3R_15565001 0.60 RAL-325 272 chr3R 15699164 15699185 Doc 24 1 7 21 '3-4 60.63 5.1 1.1 intergenic not near genes chr3R_7_15695001 chr3R_15695001 0.43 RAL-325 273 chr3R 17506692 17506762 hopper 8 2 8 70 '6-2 63.88 3.2 1.9 intergenic not near genes chr3R_8_17505001 chr3R_17505001 0.75 RAL-325 274 chr3R 17643500 17643565 blood 368 5 4 65 '1-3 58.83 1.2 1.8 intron CG43175 + chr3R_4_17640001 chr3R_17640001 0.25 RAL-325 275 chr3R 17733256 17733334 INE-1 565 562 6 78 '4-2 75.52 2.8 1.6 intergenic Lgr1 +,CG14321 + chr3R_6_17730001 chr3R_17730001 0.67 RAL-325 276 chr3R 18030738 18030759 17.6 7397 492 4 21 '2-2 66.38 1.7 1.5 intergenic not near genes chr3R_4_18030001 chr3R_18030001 0.50 RAL-325 277 chr3R 18133573 18133644 412 487 3 13 71 '7-6 62.40 3.5 2.9 3` UTR sr + chr3R_13_18130001 chr3R_18130001 0.54 RAL-325 278 chr3R 19513489 19513542 hobo 15 2930 7 53 '5-2 63.64 4.1 1.4 intron Dys + chr3R_7_19510001 chr3R_19510001 0.71 RAL-325 279 chr3R 20103379 20103449 opus 487 1 9 70 '4-5 72.18 3.5 2.0 intergenic not near genes chr3R_9_20100001 chr3R_20100001 0.44 RAL-325 280 chr3R 21233685 21233737 hobo 2934 11 14 52 '6-8 60.46 3.8 2.9 intron e - chr3R_14_21230001 chr3R_21230001 0.43 RAL-325 281 chr3R 21259917 21259947 I-element 5331 15 6 30 '2-4 63.43 7.9 0.7 intron ETHR + chr3R_6_21255001 chr3R_21255001 0.33 RAL-325 282 chr3R 21843505 21843546 roo 9071 8673 4 41 '2-2 69.50 1.4 1.7 exon Gr93b - chr3R_4_21840001 chr3R_21840001 0.50 RAL-325 283 chr3R 22857822 22857885 roo 3 405 11 63 '4-7 62.22 1.7 4.1 intergenic not near genes chr3R_11_22855001 chr3R_22855001 0.36 RAL-325 284 chr3R 23235887 23235941 hobo 7 2932 6 54 '4-2 65.15 3.1 1.5 intron CG4467 - chr3R_6_23235001 chr3R_23235001 0.67 RAL-325 285 chr3R 23275372 23275454 roo 8661 407 13 82 '9-4 69.61 4.3 2.5 intron orb - chr3R_13_23275001 chr3R_23275001 0.69 RAL-325 286 chr3R 23496424 23496452 HMS-Beagle 249 7033 7 28 '3-4 65.28 3.8 1.5 intergenic not near genes chr3R_7_23495001 chr3R_23495001 0.43 RAL-325 287 chr3R 23889186 23889250 pogo 2092 10 9 64 '8-1 65.04 1.9 3.1 intron Pli - chr3R_9_23885001 chr3R_23885001 0.89 RAL-325 288 chr3R 24477849 24477927 hopper 1413 1414 10 78 '6-4 67.11 1.9 3.4 intergenic not near genes chr3R_10_24475001 chr3R_24475001 0.60 RAL-325 289 chr3R 24482269 24482340 blood 7388 7 9 71 '4-5 62.86 4.3 1.7 intergenic not near genes chr3R_9_24480001 chr3R_24480001 0.44 RAL-325 290 chr3R 24565195 24565259 roo 406 10 5 64 '2-3 63.72 0.5 3.3 intron CG13624 - chr3R_5_24565001 chr3R_24565001 0.40 RAL-325 291 chr3R 25400439 25400509 hobo 6 2708 13 70 '8-5 63.43 3.4 3.0 intron,exon Fur1 -,Muc96D - chr3R_13_25400001 chr3R_25400001 0.62 RAL-325 292 chr3R 25505860 25505910 hobo 2934 18 6 50 '3-3 60.23 3.9 1.2 exon CG5107 + chr3R_6_25505001 chr3R_25505001 0.50 RAL-325 293 chr3R 25516082 25516124 P-element 15 2869 7 42 '2-5 37.98 0.7 4.1 intergenic msi + chr3R_7_25515001 chr3R_25515001 0.29 RAL-325 294 chr3R 25556721 25556792 Transpac 5227 8 8 71 '6-2 61.52 3.2 1.9 intron msi + chr3R_8_25555001 chr3R_25555001 0.75 RAL-325 295 chr3R 25591255 25591322 hobo 13 2707 7 67 '3-4 61.35 3.3 1.6 intron msi + chr3R_7_25590001 chr3R_25590001 0.43 RAL-325 296 chr3R 25927586 25927655 opus 9 498 16 69 '7-9 67.32 1.5 6.4 intron CCAP-R - chr3R_16_25925001 chr3R_25925001 0.44 RAL-325 297 chr3R 26198308 26198361 pogo 2095 19 10 53 '5-5 68.17 0.8 5.6 intron CR44320 + chr3R_10_26195001 chr3R_26195001 0.50 RAL-325 298 chr3R 26366479 26366531 jockey 4974 4675 4 52 '3-1 62.35 3.2 1.0 intergenic not near genes chr3R_4_26365001 chr3R_26365001 0.75 RAL-325 299 chr3R 26629100 26629182 Burdock 256 6137 9 82 '3-6 65.62 1.6 3.5 intergenic TwdlK - chr3R_9_26625001 chr3R_26625001 0.33 RAL-325 300 chr3R 27056071 27056128 hopper 8 1407 4 57 '1-3 57.78 0.6 2.5 intron RYa-R + chr3R_4_27055001 chr3R_27055001 0.25 RAL-325 301 chr3R 27266236 27266264 F-element 4602 4572 6 28 '4-2 58.75 5.9 0.9 3` UTR CG14260 + chr3R_6_27265001 chr3R_27265001 0.67 RAL-325 302 chr3R 27293783 27293837 pogo 1 2077 6 54 '3-3 68.30 5.5 0.9 intergenic not near genes chr3R_6_27290001 chr3R_27290001 0.50 RAL-325 303 chr3R 27451903 27451968 hobo 2929 2 13 65 '4-9 63.41 3.8 2.7 intergenic not near genes chr3R_13_27450001 chr3R_27450001 0.31 RAL-325 304 chr3R 27691091 27691139 Stalker2 388 7258 12 48 '10-2 61.12 9.3 1.2 intron CG12880 + chr3R_12_27690001 chr3R_27690001 0.83 RAL-325 305 chr3R 27770813 27770869 hobo 2930 4 14 56 '3-11 61.39 3.8 2.9 intron CG34353 - chr3R_14_27770001 chr3R_27770001 0.21 RAL-325 306 chr3R 27995907 27995950 hobo 2 2911 11 43 '5-6 66.11 4.8 1.9 intergenic not near genes chr3R_11_27995001 chr3R_27995001 0.45 RAL-325 307 chr3R 28147610 28147628 opus 496 7480 5 18 '4-1 63.43 7.7 0.6 5` UTR CG34354 + chr3R_5_28145001 chr3R_28145001 0.80 RAL-325 308 chr3R 28662305 28662359 hobo 1 2925 9 54 '8-1 64.35 4.1 1.8 intergenic not near genes chr3R_9_28660001 chr3R_28660001 0.89 RAL-325 309 chr3R 28667965 28668010 hobo 2931 14 7 45 '3-4 66.95 2.2 2.2 intergenic not near genes chr3R_7_28665001 chr3R_28665001 0.43 RAL-325 310 chr3R 28798192 28798220 jockey 31 10 7 28 '6-1 57.74 6.2 1.0 intergenic not near genes chr3R_7_28795001 chr3R_28795001 0.86 RAL-325 311 chr3R 28929247 28929330 roo 411 8662 16 83 '9-7 66.28 2.7 4.3 intron CG14521 - chr3R_16_28925001 chr3R_28925001 0.56 RAL-325 312 chr3R 29159657 29159728 opus 4 7494 18 71 '15-3 66.03 2.4 5.3 intron CG11897 + chr3R_18_29155001 chr3R_29155001 0.83 RAL-325 313 chr3R 30191594 30191675 Burdock 257 6138 14 81 '12-2 66.94 3.2 3.3 intergenic CG9747 - chr3R_14_30190001 chr3R_30190001 0.86 RAL-325 314 chr3R 30262866 30262915 Tc3 310 314 4 49 '3-1 63.57 3.5 0.9 intergenic not near genes chr3R_4_30260001 chr3R_30260001 0.75 RAL-325 315 chr3R 30487031 30487096 roo 4 9062 17 65 '6-11 65.39 2.6 4.7 3` UTR Jon99Fii - chr3R_17_30485001 chr3R_30485001 0.35 RAL-325 316 chr3R 30607837 30607915 3S18 5765 338 5 78 '2-3 65.42 1.9 1.7 exon CG31016 + chr3R_5_30605001 chr3R_30605001 0.40 RAL-325 317 chr3R 30650822 30650891 blood 7009 364 13 69 '11-2 65.58 2.3 3.9 3` UTR CG34433 + chr3R_13_30650001 chr3R_30650001 0.85 RAL-325 318 chr3R 31053477 31053495 1360 3370 3379 4 18 '1-3 60.34 1.1 1.9 intron l(3)03670 - chr3R_4_31050001 chr3R_31050001 0.25 RAL-325 319 chr3R 31135180 31135248 412 490 8 13 68 '9-4 66.19 3.6 2.8 intron Gycbeta100B + chr3R_13_31135001 chr3R_31135001 0.69 RAL-325 320 chr3R 31513572 31513591 roo 400 9042 5 19 '2-3 63.09 4.3 0.9 intergenic not near genes chr3R_5_31510001 chr3R_31510001 0.40 RAL-325 321 chrX 1208311 1208374 S-element 1706 1705 5 63 '3-2 63.16 1.7 1.9 intergenic not near genes chrX_5_1205001 chrX_1205001 0.60 RAL-325 322 chrX 2012159 2012225 P-element 5 4 9 66 '7-2 54.32 1.7 3.3 intergenic east + chrX_9_2010001 chrX_2010001 0.78 RAL-325 323 chrX 2734707 2734759 blood 355 7017 6 52 '2-4 62.27 3.0 1.5 3` UTR crm - chrX_6_2730001 chrX_2730001 0.33 RAL-325 324 chrX 2745162 2745218 FB 12 5 9 56 '3-6 59.76 0.9 4.7 intron kirre + chrX_9_2745001 chrX_2745001 0.33 RAL-325 325 chrX 2811657 2811739 roo 8661 406 5 82 '3-2 65.77 0.6 3.1 intron kirre + chrX_5_2810001 chrX_2810001 0.60 RAL-325 326 chrX 3128259 3128281 Doc 29 6 4 22 '3-1 62.58 2.0 1.3 intron kirre + chrX_4_3125001 chrX_3125001 0.75 RAL-325 327 chrX 3232679 3232701 flea 10 4755 4 22 '2-2 69.24 1.7 1.5 intron dnc + chrX_4_3230001 chrX_3230001 0.50 RAL-325 328 chrX 3869031 3869090 roo 3 9054 5 59 '3-2 64.39 4.0 1.0 intron,5` UTR yin -,CG2930 + chrX_5_3865001 chrX_3865001 0.60 RAL-325 329 chrX 3968637 3968708 P-element 2886 6 10 71 '9-1 54.81 2.1 3.2 5` UTR CG6428 - chrX_10_3965001 chrX_3965001 0.90 RAL-325 330 chrX 4093327 4093356 accord 182 7028 4 29 '2-2 72.48 3.5 0.9 intergenic not near genes chrX_4_4090001 chrX_4090001 0.50 RAL-325 331 chrX 5716015 5716084 jockey 4680 4997 7 69 '5-2 62.88 4.9 1.2 intron CG33080 - chrX_7_5715001 chrX_5715001 0.71 RAL-325 332 chrX 6398830 6398878 roo 404 21 4 48 '3-1 69.84 1.3 1.7 intergenic not near genes chrX_4_6395001 chrX_6395001 0.75 RAL-325 333 chrX 6704954 6705009 pogo 2085 2 5 55 '2-3 68.89 1.0 2.5 intron CG14441 + chrX_5_6700001 chrX_6700001 0.40 RAL-325 334 chrX 7154113 7154158 hobo 19 2929 5 45 '3-2 68.40 5.3 0.8 intron CG9650 + chrX_5_7150001 chrX_7150001 0.60 RAL-325 335 chrX 7154183 7154250 hopper 8 1410 5 67 '2-3 63.15 1.8 1.8 intron CG9650 + chrX_5_7150001 chrX_7150001 0.40 RAL-325 336 chrX 7849731 7849773 hobo 4 2937 5 42 '2-3 70.68 2.5 1.4 intergenic not near genes chrX_5_7845001 chrX_7845001 0.40 RAL-325 337 chrX 7993303 7993348 hobo 2916 8 7 45 '2-5 62.53 1.8 2.5 intergenic not near genes chrX_7_7990001 chrX_7990001 0.29 RAL-325 338 chrX 8027467 8027486 Juan 13 13 4 19 '2-2 57.87 0.7 2.4 intergenic Tbh + chrX_4_8025001 chrX_8025001 0.50 RAL-325 339 chrX 9435299 9435353 Transpac 9 5211 7 54 '3-4 66.80 0.4 5.0 intron mgl - chrX_7_9435001 chrX_9435001 0.43 RAL-325 340 chrX 9982127 9982157 I-element 12 5325 6 30 '3-3 58.97 0.8 3.3 intergenic not near genes chrX_6_9980001 chrX_9980001 0.50 RAL-325 341 chrX 10229862 10229944 roo 412 8663 12 82 '9-3 63.47 1.9 4.1 3` UTR CG34408 + chrX_12_10225001 chrX_10225001 0.75 RAL-325 342 chrX 10561493 10561516 jockey 4767 4776 5 23 '2-3 57.25 1.6 1.9 intron spri - chrX_5_10560001 chrX_10560001 0.40 RAL-325 343 chrX 11202790 11202840 mdg1 393 7040 5 50 '3-2 65.87 3.5 1.1 3` UTR CG11106 + chrX_5_11200001 chrX_11200001 0.60 RAL-325 344 chrX 13735098 13735116 Juan 4190 4046 4 18 '1-3 61.33 0.7 2.4 intron g - chrX_4_13735001 chrX_13735001 0.25 RAL-325 345 chrX 13750217 13750246 Transpac 30 4919 10 29 '6-4 65.52 0.6 6.2 intron Pdcd4 - chrX_10_13750001 chrX_13750001 0.60 RAL-325 346 chrX 13784428 13784472 P-element 8 9 4 44 '1-3 45.47 4.7 0.7 intron inaE + chrX_4_13780001 chrX_13780001 0.25 RAL-325 347 chrX 14397141 14397186 hobo 9 2933 7 45 '4-3 60.90 2.0 2.3 intron dpr8 + chrX_7_14395001 chrX_14395001 0.57 RAL-325 348 chrX 14427623 14427672 pogo 2095 23 4 49 '1-3 67.72 1.5 1.6 intron dpr8 + chrX_4_14425001 chrX_14425001 0.25 RAL-325 349 chrX 14569567 14569620 roo 8690 407 4 53 '1-3 72.40 2.0 1.3 intergenic not near genes chrX_4_14565001 chrX_14565001 0.25 RAL-325 350 chrX 14618236 14618262 hobo 31 5 6 26 '2-4 65.78 2.4 1.8 intron NetA - chrX_6_14615001 chrX_14615001 0.33 RAL-325 351 chrX 14682912 14682936 hobo 33 1 7 24 '2-5 59.81 2.6 1.9 intergenic not near genes chrX_7_14680001 chrX_14680001 0.29 RAL-325 352 chrX 16772149 16772225 Tirant 8504 8106 6 76 '4-2 66.71 2.7 1.6 intron if - chrX_6_16770001 chrX_16770001 0.67 RAL-325 353 chrX 17561720 17561766 Tirant 377 8122 8 46 '3-5 67.94 5.4 1.2 intergenic not near genes chrX_8_17560001 chrX_17560001 0.38 RAL-325 354 chrX 17609256 17609310 roo 411 28 4 54 '3-1 76.10 1.6 1.5 intergenic not near genes chrX_4_17605001 chrX_17605001 0.75 RAL-325 355 chrX 17837973 17838031 S-element 1710 1701 4 58 '1-3 60.33 1.5 1.6 intron CG6398 + chrX_4_17835001 chrX_17835001 0.25 RAL-325 356 chrX 18239068 18239095 jockey 4563 4589 7 27 '2-5 62.81 4.2 1.3 intergenic not near genes chrX_7_18235001 chrX_18235001 0.29 RAL-325 357 chrX 18239410 18239430 jockey 4966 4988 5 20 '4-1 64.32 0.7 2.9 intergenic not near genes chrX_5_18235001 chrX_18235001 0.80 RAL-325 358 chrX 19316760 19316811 FB 11 9 5 51 '3-2 66.19 1.2 2.3 intron out - chrX_5_19315001 chrX_19315001 0.60 RAL-325 359 chrX 19372700 19372717 G2 3008 2989 4 17 '1-3 60.12 0.4 2.9 intron kek5 + chrX_4_19370001 chrX_19370001 0.25 RAL-325 360 chrX 21281208 21281277 P-element 2884 1 13 69 '10-3 50.06 4.9 2.2 intergenic CG32521 - chrX_13_21280001 chrX_21280001 0.77 RAL-325 361 chrX 21442030 21442094 1360 3 3385 5 64 '3-2 58.54 2.8 1.3 intron CG42343 - chrX_5_21440001 chrX_21440001 0.60 RAL-325 362 chrX 21466145 21466196 opus 1 475 4 51 '2-2 72.67 2.6 1.1 intergenic not near genes chrX_4_21465001 chrX_21465001 0.50 RAL-325 363 chrX 22855420 22855461 P-element 2878 27 8 41 '4-4 38.65 3.0 2.0 intron CG42346 + chrX_8_22855001 chrX_22855001 0.50 RAL-325