SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 25406 25419 chr2L 25730 25743 4 324 48.5 33.5 41.0 0.1 337 chr2L 25406 3` UTR Cda5 - chr2L 25574 3` UTR Cda5 - chr2L 25743 3` UTR Cda5 - chr2L_4_25001 chr2L_25001 RAL-321 2 chr2L 46329 46379 chr2L 46427 46477 23 98 4.5 5.5 5.0 3.8 148 chr2L 46329 intron Cda5 - chr2L 46403 intron Cda5 - chr2L 46477 intron Cda5 - chr2L_23_45001 chr2L_45001 RAL-321 3 chr2L 47452 47465 chr2L 52577 52590 jockey 7 5125 10.0 12.5 11.2 0.6 5138 chr2L 47452 intron Cda5 - chr2L 50021 intron Cda5 - chr2L 52590 intron Cda5 - chr2L_7_50001 chr2L_50001 RAL-321 4 chr2L 47466 47478 chr2L 52576 52603 jockey 6 5122 11.0 12.0 11.5 0.5 5137 chr2L 47466 intron Cda5 - chr2L 50034 intron Cda5 - chr2L 52603 intron Cda5 - chr2L_6_50001 chr2L_50001 RAL-321 5 chr2L 89696 89747 chr2L 89793 89844 21 96 6.0 6.5 6.2 2.9 148 chr2L 89696 intergenic not near genes chr2L 89770 intergenic not near genes chr2L 89844 intergenic not near genes chr2L_21_85001 chr2L_85001 RAL-321 6 chr2L 127478 127521 chr2L 127593 127636 13 109 6.0 6.0 6.0 1.9 158 chr2L 127478 intron,intron CG11455 +,CG3164 - chr2L 127557 intron,intron CG11455 +,CG3164 - chr2L 127636 intron,intron CG11455 +,CG3164 - chr2L_13_125001 chr2L_125001 RAL-321 7 chr2L 172009 172049 chr2L 172139 172179 17 129 4.0 7.5 5.8 2.5 170 chr2L 172009 intron spen + chr2L 172094 intron spen + chr2L 172179 intron spen + chr2L_17_170001 chr2L_170001 RAL-321 8 chr2L 209834 209880 chr2L 209963 210009 20 129 6.0 8.5 7.2 2.4 175 chr2L 209834 exon Tbc1d15-17 + chr2L 209922 3` UTR Tbc1d15-17 + chr2L 210009 3` UTR Tbc1d15-17 + chr2L_20_205001 chr2L_205001 RAL-321 9 chr2L 218890 218941 chr2L 218989 219025 15 98 7.5 7.0 7.2 1.8 135 chr2L 218890 intron kis - chr2L 218958 intron kis - chr2L 219025 intron kis - chr2L_15_215001 chr2L_215001 RAL-321 10 chr2L 245528 245553 chr2L 245659 245684 14 131 14.0 7.0 10.5 1.2 156 chr2L 245528 intron kis - chr2L 245606 intron kis - chr2L 245684 intron kis - chr2L_14_245001 chr2L_245001 RAL-321 11 chr2L 252384 252425 chr2L 252496 252537 19 106 3.0 4.0 3.5 4.2 153 chr2L 252384 intergenic Rpp30 -,CG3645 - chr2L 252460 intergenic Rpp30 -,CG3645 - chr2L 252537 intergenic CG3645 -,Rpp30 - chr2L_19_250001 chr2L_250001 RAL-321 12 chr2L 314263 314296 chr2L 314366 314402 14 102 8.5 1.5 5.0 2.3 139 chr2L 314263 intron Plc21C + chr2L 314332 intron Plc21C + chr2L 314402 intron Plc21C + chr2L_14_310001 chr2L_310001 RAL-321 13 chr2L 325130 325151 chr2L 325203 325242 16 92 9.5 11.0 10.2 1.4 112 chr2L 325130 intron Plc21C + chr2L 325186 intron Plc21C + chr2L 325242 intron Plc21C + chr2L_16_325001 chr2L_325001 RAL-321 14 chr2L 347866 347919 chr2L 355386 355439 blood 22 7519 6.0 6.0 6.0 3.1 7573 chr2L 347866 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355439 3` UTR Plc21C + chr2L_22_350001 chr2L_350001 RAL-321 15 chr2L 371427 371458 chr2L 371526 371557 9 99 4.5 9.5 7.0 1.1 130 chr2L 371427 intergenic not near genes chr2L 371492 intergenic not near genes chr2L 371557 intergenic not near genes chr2L_9_370001 chr2L_370001 RAL-321 16 chr2L 407929 407969 chr2L 408030 408070 33 100 7.0 7.0 7.0 4.1 141 chr2L 407929 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408070 3` UTR AP-2alpha - chr2L_33_405001 chr2L_405001 RAL-321 17 chr2L 489512 489565 chr2L 489617 489670 17 100 3.0 3.5 3.2 4.0 158 chr2L 489512 intron ush + chr2L 489591 intron ush + chr2L 489670 intron ush + chr2L_17_485001 chr2L_485001 RAL-321 18 chr2L 686915 686937 chr2L 695975 695997 roo 6 9060 7.0 5.0 6.0 0.9 9082 chr2L 686915 intron ds - chr2L 691456 intron ds - chr2L 695997 intron ds - chr2L_6_690001 chr2L_690001 RAL-321 19 chr2L 686939 686946 chr2L 695972 696006 roo 6 9056 4.5 5.0 4.8 1.0 9067 chr2L 686939 intron ds - chr2L 691472 intron ds - chr2L 696006 intron ds - chr2L_6_690001 chr2L_690001 RAL-321 20 chr2L 736857 736901 chr2L 736982 737026 18 125 5.5 6.5 6.0 2.6 169 chr2L 736857 intergenic Eaat2 - chr2L 736942 intergenic Eaat2 - chr2L 737026 intergenic Eaat2 - chr2L_18_735001 chr2L_735001 RAL-321 21 chr2L 763579 763629 chr2L 763675 763700 19 90 1.5 2.0 1.8 6.8 121 chr2L 763579 intergenic not near genes chr2L 763640 intergenic not near genes chr2L 763700 intergenic not near genes chr2L_19_760001 chr2L_760001 RAL-321 22 chr2L 764542 764592 chr2L 764643 764653 30 98 5.5 5.0 5.2 4.8 111 chr2L 764542 intergenic not near genes chr2L 764598 intergenic not near genes chr2L 764653 intergenic not near genes chr2L_30_760001 chr2L_760001 RAL-321 23 chr2L 770444 770457 chr2L 772245 772258 Bari1 5 1799 11.0 6.0 8.5 0.5 1814 chr2L 770444 intergenic not near genes chr2L 771351 intergenic not near genes chr2L 772258 intergenic CR44614 + chr2L_5_770001 chr2L_770001 RAL-321 24 chr2L 770459 770494 chr2L 772244 772291 Bari1 17 1793 4.5 5.5 5.0 2.8 1832 chr2L 770459 intergenic not near genes chr2L 771375 intergenic not near genes chr2L 772291 intergenic CR44614 + chr2L_17_770001 chr2L_770001 RAL-321 25 chr2L 922444 922495 chr2L 922545 922596 23 101 3.5 1.5 2.5 6.6 152 chr2L 922444 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922596 intergenic CG4341 + chr2L_23_920001 chr2L_920001 RAL-321 26 chr2L 937037 937065 chr2L 937133 937161 14 95 2.5 2.0 2.2 4.4 124 chr2L 937037 intron CG4341 + chr2L 937099 intron CG4341 + chr2L 937161 intron CG4341 + chr2L_14_935001 chr2L_935001 RAL-321 27 chr2L 976860 976894 chr2L 984516 984534 roo 15 7655 9.0 4.0 6.5 2.0 7674 chr2L 976860 intergenic not near genes chr2L 980697 intergenic not near genes chr2L 984534 intergenic not near genes chr2L_15_980001 chr2L_980001 RAL-321 28 chr2L 996707 996718 chr2L 1005817 1005833 roo 4 9113 4.5 3.0 3.8 0.8 9126 chr2L 996707 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005833 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-321 29 chr2L 1035548 1035588 chr2L 1035645 1035685 16 96 5.5 6.5 6.0 2.3 137 chr2L 1035548 intron IA-2 - chr2L 1035616 intron IA-2 - chr2L 1035685 intron IA-2 - chr2L_16_1035001 chr2L_1035001 RAL-321 30 chr2L 1042583 1042615 chr2L 1042694 1042705 10 107 0.0 0.0 0.0 10.0 122 chr2L 1042583 intron IA-2 - chr2L 1042644 intron IA-2 - chr2L 1042705 intron IA-2 - chr2L_10_1040001 chr2L_1040001 RAL-321 31 chr2L 1154075 1154107 chr2L 1154187 1154219 26 110 5.5 6.0 5.8 3.8 144 chr2L 1154075 intron capt - chr2L 1154147 intron capt - chr2L 1154219 intron capt - chr2L_26_1150001 chr2L_1150001 RAL-321 32 chr2L 1156840 1156894 chr2L 1156965 1157009 19 122 2.5 3.5 3.0 4.8 169 chr2L 1156840 intron capt - chr2L 1156924 intron capt - chr2L 1157009 intron capt - chr2L_19_1155001 chr2L_1155001 RAL-321 33 chr2L 1199851 1199864 chr2L 1199979 1199992 10 128 5.0 12.5 8.8 1.0 141 chr2L 1199851 3` UTR CG43348 + chr2L 1199922 3` UTR CG43348 + chr2L 1199992 intergenic CG43348 +,CG43349 + chr2L_10_1195001 chr2L_1195001 RAL-321 34 chr2L 1220114 1220155 chr2L 1227600 1227641 blood 21 7485 9.0 9.5 9.2 2.1 7527 chr2L 1220114 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227641 intron CG42329 + chr2L_21_1220001 chr2L_1220001 RAL-321 35 chr2L 1237969 1238003 chr2L 1238073 1238107 14 104 6.5 8.5 7.5 1.6 138 chr2L 1237969 intergenic not near genes chr2L 1238038 intergenic not near genes chr2L 1238107 intergenic not near genes chr2L_14_1235001 chr2L_1235001 RAL-321 36 chr2L 1261135 1261252 chr2L 1261237 1261344 23 101 0.0 0.0 0.0 23.0 209 chr2L 1261135 intron robo3 + chr2L 1261240 intron robo3 + chr2L 1261344 intron robo3 + chr2L_23_1260001 chr2L_1260001 RAL-321 37 chr2L 1272421 1272439 chr2L 1272531 1272548 11 110 3.0 10.0 6.5 1.5 127 chr2L 1272421 intron robo3 + chr2L 1272484 intron robo3 + chr2L 1272548 intron robo3 + chr2L_11_1270001 chr2L_1270001 RAL-321 38 chr2L 1301748 1301753 chr2L 1302305 1302310 gypsy 4 557 0.0 12.0 6.0 0.6 562 chr2L 1301748 intergenic not near genes chr2L 1302029 intergenic not near genes chr2L 1302310 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-321 39 chr2L 1312859 1312901 chr2L 1312966 1312971 12 99 5.0 5.0 5.0 2.0 112 chr2L 1312859 intergenic not near genes chr2L 1312915 intergenic not near genes chr2L 1312971 intergenic not near genes chr2L_12_1310001 chr2L_1310001 RAL-321 40 chr2L 1459842 1459884 chr2L 1459958 1459980 15 123 5.5 7.0 6.2 2.1 138 chr2L 1459842 intergenic not near genes chr2L 1459911 intergenic not near genes chr2L 1459980 intergenic not near genes chr2L_15_1455001 chr2L_1455001 RAL-321 41 chr2L 1511955 1512006 chr2L 1512073 1512124 17 116 6.0 5.5 5.8 2.5 169 chr2L 1511955 intergenic not near genes chr2L 1512040 intergenic not near genes chr2L 1512124 intergenic not near genes chr2L_17_1510001 chr2L_1510001 RAL-321 42 chr2L 1536507 1536517 chr2L 1536648 1536669 7 148 0.5 6.0 3.2 1.7 162 chr2L 1536507 intergenic not near genes chr2L 1536588 intergenic not near genes chr2L 1536669 intergenic not near genes chr2L_7_1535001 chr2L_1535001 RAL-321 43 chr2L 1557128 1557174 chr2L 1557273 1557319 28 145 3.5 5.0 4.2 5.4 191 chr2L 1557128 intron haf + chr2L 1557224 intron haf + chr2L 1557319 intron haf + chr2L_28_1555001 chr2L_1555001 RAL-321 44 chr2L 1570679 1570714 chr2L 1573571 1573601 F-element 13 2891 6.5 5.0 5.8 1.9 2922 chr2L 1570679 intron haf + chr2L 1572140 intron haf + chr2L 1573601 intron haf + chr2L_13_1570001 chr2L_1570001 RAL-321 45 chr2L 1591870 1591895 chr2L 1591947 1591999 13 102 6.0 5.5 5.8 1.9 129 chr2L 1591870 intron haf + chr2L 1591934 intron haf + chr2L 1591999 intron haf + chr2L_13_1590001 chr2L_1590001 RAL-321 46 chr2L 1634749 1634763 chr2L 1634854 1634859 4 104 7.5 5.0 6.2 0.6 110 chr2L 1634749 intergenic not near genes chr2L 1634804 intergenic not near genes chr2L 1634859 intergenic not near genes chr2L_4_1630001 chr2L_1630001 RAL-321 47 chr2L 1662001 1662027 chr2L 1662106 1662132 13 105 5.5 0.0 2.8 3.4 131 chr2L 1662001 intron chinmo + chr2L 1662066 intron chinmo + chr2L 1662132 intron chinmo + chr2L_13_1660001 chr2L_1660001 RAL-321 48 chr2L 1678958 1679004 chr2L 1686443 1686489 blood 18 7484 9.0 12.0 10.5 1.6 7531 chr2L 1678958 intron chinmo + chr2L 1682724 intron chinmo + chr2L 1686489 intron chinmo + chr2L_18_1680001 chr2L_1680001 RAL-321 49 chr2L 1692058 1692101 chr2L 1692159 1692202 25 101 5.5 8.0 6.8 3.2 144 chr2L 1692058 intron chinmo + chr2L 1692130 intron chinmo + chr2L 1692202 intron chinmo + chr2L_25_1690001 chr2L_1690001 RAL-321 50 chr2L 1711342 1711388 chr2L 1711686 1711732 mdg3 16 338 6.5 10.0 8.2 1.7 390 chr2L 1711342 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711537 3` UTR frtz - chr2L 1711732 3` UTR frtz - chr2L_16_1710001 chr2L_1710001 RAL-321 51 chr2L 1779042 1779051 chr2L 1779228 1779235 5 186 34.5 11.5 23.0 0.2 193 chr2L 1779042 intergenic not near genes chr2L 1779138 intergenic not near genes chr2L 1779235 intergenic not near genes chr2L_5_1775001 chr2L_1775001 RAL-321 52 chr2L 1782410 1782466 chr2L 1782510 1782566 31 97 7.5 4.0 5.8 4.6 156 chr2L 1782410 intergenic not near genes chr2L 1782488 intergenic not near genes chr2L 1782566 intergenic not near genes chr2L_31_1780001 chr2L_1780001 RAL-321 53 chr2L 1920775 1920822 chr2L 1920877 1920926 14 99 1.0 5.0 3.0 3.5 151 chr2L 1920775 intron CG7337 + chr2L 1920850 intron CG7337 + chr2L 1920926 intron CG7337 + chr2L_14_1920001 chr2L_1920001 RAL-321 54 chr2L 1948610 1948632 chr2L 1948737 1948759 8 127 0.0 4.5 2.2 2.5 149 chr2L 1948610 intergenic not near genes chr2L 1948684 intergenic not near genes chr2L 1948759 intergenic not near genes chr2L_8_1945001 chr2L_1945001 RAL-321 55 chr2L 1993190 1993223 chr2L 1993296 1993329 15 104 5.5 8.0 6.8 1.9 139 chr2L 1993190 intergenic not near genes chr2L 1993260 intergenic not near genes chr2L 1993329 intergenic not near genes chr2L_15_1990001 chr2L_1990001 RAL-321 56 chr2L 2007833 2007870 chr2L 2007961 2007998 12 128 5.5 6.5 6.0 1.7 165 chr2L 2007833 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2007998 intergenic CR45712 +,Nplp4 + chr2L_12_2005001 chr2L_2005001 RAL-321 57 chr2L 2049200 2049240 chr2L 2049299 2049344 14 102 0.0 5.0 2.5 4.0 144 chr2L 2049200 intergenic not near genes chr2L 2049272 intergenic not near genes chr2L 2049344 intergenic not near genes chr2L_14_2045001 chr2L_2045001 RAL-321 58 chr2L 2100375 2100379 chr2L 2109546 2109550 roo 4 9170 12.0 7.5 9.8 0.4 9175 chr2L 2100375 intron dpr3 - chr2L 2104962 intron dpr3 - chr2L 2109550 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-321 59 chr2L 2100380 2100383 chr2L 2109542 2109553 roo 4 9166 10.5 7.0 8.8 0.4 9173 chr2L 2100380 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109553 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-321 60 chr2L 2100385 2100401 chr2L 2109540 2109551 roo 5 9162 7.5 7.0 7.2 0.6 9166 chr2L 2100385 intron dpr3 - chr2L 2104968 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-321 61 chr2L 2112095 2112124 chr2L 2119777 2119806 opus 7 7674 7.5 7.5 7.5 0.8 7711 chr2L 2112095 intergenic not near genes chr2L 2115950 intergenic not near genes chr2L 2119806 intergenic not near genes chr2L_7_2115001 chr2L_2115001 RAL-321 62 chr2L 2112130 2112144 chr2L 2119774 2119825 opus 5 7670 4.5 6.0 5.2 0.8 7695 chr2L 2112130 intergenic not near genes chr2L 2115978 intergenic not near genes chr2L 2119825 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-321 63 chr2L 2294048 2294054 chr2L 2299251 2299262 copia 4 5214 4.5 3.5 4.0 0.8 5214 chr2L 2294048 intergenic not near genes chr2L 2296655 intergenic not near genes chr2L 2299262 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-321 64 chr2L 2294055 2294075 chr2L 2299250 2299275 copia 7 5200 1.5 3.5 2.5 2.0 5220 chr2L 2294055 intergenic not near genes chr2L 2296665 intergenic not near genes chr2L 2299275 intergenic not near genes chr2L_7_2295001 chr2L_2295001 RAL-321 65 chr2L 2317101 2317130 chr2L 2317292 2317304 20 190 40.0 40.5 40.2 0.5 203 chr2L 2317101 intron,intron CG9967 -,eys + chr2L 2317202 intron,intron CG9967 -,eys + chr2L 2317304 intron,intron CG9967 -,eys + chr2L_20_2315001 chr2L_2315001 RAL-321 66 chr2L 2357168 2357184 chr2L 2357306 2357311 5 135 13.0 8.5 10.8 0.4 143 chr2L 2357168 5` UTR,intron CG9967 -,eys + chr2L 2357240 5` UTR,intron CG9967 -,eys + chr2L 2357311 5` UTR,intron CG9967 -,eys + chr2L_5_2355001 chr2L_2355001 RAL-321 67 chr2L 2357194 2357215 chr2L 2357302 2357353 16 131 4.5 7.0 5.8 2.4 159 chr2L 2357194 5` UTR,intron CG9967 -,eys + chr2L 2357274 5` UTR,intron CG9967 -,eys + chr2L 2357353 5` UTR,intron CG9967 -,eys + chr2L_16_2355001 chr2L_2355001 RAL-321 68 chr2L 2372345 2372402 chr2L 2372451 2372502 7 104 0.0 7.5 3.8 1.5 157 chr2L 2372345 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372502 3` UTR CG3609 - chr2L_7_2370001 chr2L_2370001 RAL-321 69 chr2L 2504206 2504235 chr2L 2504304 2504333 15 98 7.5 9.5 8.5 1.6 127 chr2L 2504206 intergenic not near genes chr2L 2504270 intergenic not near genes chr2L 2504333 intergenic not near genes chr2L_15_2500001 chr2L_2500001 RAL-321 70 chr2L 2557199 2557218 chr2L 2557295 2557314 8 96 3.0 11.0 7.0 1.0 115 chr2L 2557199 intergenic not near genes chr2L 2557256 intergenic not near genes chr2L 2557314 intergenic not near genes chr2L_8_2555001 chr2L_2555001 RAL-321 71 chr2L 2565534 2565559 chr2L 2571627 2571652 297 7 6093 6.5 12.0 9.2 0.7 6118 chr2L 2565534 exon Cyp309a2 - chr2L 2568593 intron Cyp309a2 - chr2L 2571652 exon Cyp309a2 - chr2L_7_2565001 chr2L_2565001 RAL-321 72 chr2L 2587801 2587848 chr2L 2587895 2587947 33 95 1.5 7.5 4.5 6.0 146 chr2L 2587801 intergenic not near genes chr2L 2587874 intergenic not near genes chr2L 2587947 intergenic not near genes chr2L_33_2585001 chr2L_2585001 RAL-321 73 chr2L 2619203 2619214 chr2L 2619309 2619320 5 106 12.0 5.5 8.8 0.5 117 chr2L 2619203 intergenic not near genes chr2L 2619262 intergenic not near genes chr2L 2619320 intergenic not near genes chr2L_5_2615001 chr2L_2615001 RAL-321 74 chr2L 2619216 2619245 chr2L 2619305 2619351 15 104 7.5 4.5 6.0 2.1 135 chr2L 2619216 intergenic not near genes chr2L 2619284 intergenic not near genes chr2L 2619351 intergenic not near genes chr2L_15_2615001 chr2L_2615001 RAL-321 75 chr2L 2661220 2661231 chr2L 2663033 2663071 I-element 5 1830 0.5 2.0 1.2 2.3 1851 chr2L 2661220 intergenic not near genes chr2L 2662146 intergenic not near genes chr2L 2663071 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-321 76 chr2L 2709294 2709310 chr2L 2709397 2709413 4 103 3.5 6.0 4.8 0.7 119 chr2L 2709294 intron CG31690 + chr2L 2709354 intron CG31690 + chr2L 2709413 intron CG31690 + chr2L_4_2705001 chr2L_2705001 RAL-321 77 chr2L 2715666 2715699 chr2L 2715762 2715795 16 96 5.0 6.0 5.5 2.5 129 chr2L 2715666 intron CG31690 + chr2L 2715730 intron CG31690 + chr2L 2715795 intron CG31690 + chr2L_16_2715001 chr2L_2715001 RAL-321 78 chr2L 2786086 2786136 chr2L 2786193 2786243 26 106 4.0 6.0 5.0 4.3 157 chr2L 2786086 intron Syt1 - chr2L 2786164 intron Syt1 - chr2L 2786243 intron Syt1 - chr2L_26_2785001 chr2L_2785001 RAL-321 79 chr2L 2895666 2895714 chr2L 2895772 2895818 12 103 6.0 0.5 3.2 2.9 152 chr2L 2895666 intron lilli + chr2L 2895742 intron lilli + chr2L 2895818 intron lilli + chr2L_12_2895001 chr2L_2895001 RAL-321 80 chr2L 2933283 2933316 chr2L 2935482 2935515 pogo 11 2199 4.5 6.5 5.5 1.7 2232 chr2L 2933283 intron lilli + chr2L 2934399 intron lilli + chr2L 2935515 intron lilli + chr2L_11_2930001 chr2L_2930001 RAL-321 81 chr2L 2937400 2937451 chr2L 2937497 2937547 24 95 5.0 5.0 5.0 4.0 147 chr2L 2937400 intron lilli + chr2L 2937474 intron lilli + chr2L 2937547 intron lilli + chr2L_24_2935001 chr2L_2935001 RAL-321 82 chr2L 3073010 3073063 chr2L 3078233 3078275 copia 27 5222 7.0 5.5 6.2 3.8 5265 chr2L 3073010 intron toc - chr2L 3075642 intron toc - chr2L 3078275 intron toc - chr2L_27_3075001 chr2L_3075001 RAL-321 83 chr2L 3087400 3087409 chr2L 3087492 3087497 7 106 7.0 7.0 7.0 0.9 97 chr2L 3087400 intron toc - chr2L 3087448 intron toc - chr2L 3087497 intron toc - chr2L_7_3085001 chr2L_3085001 RAL-321 84 chr2L 3087410 3087417 chr2L 3087491 3087498 7 107 5.0 7.0 6.0 1.0 88 chr2L 3087410 intron toc - chr2L 3087454 intron toc - chr2L 3087498 intron toc - chr2L_7_3085001 chr2L_3085001 RAL-321 85 chr2L 3108848 3108898 chr2L 3108945 3108995 20 96 4.0 5.0 4.5 3.6 147 chr2L 3108848 exon toc - chr2L 3108922 intron toc - chr2L 3108995 intron toc - chr2L_20_3105001 chr2L_3105001 RAL-321 86 chr2L 3113409 3113445 chr2L 3113524 3113560 20 115 0.0 6.0 3.0 5.0 151 chr2L 3113409 intron toc - chr2L 3113484 intron toc - chr2L 3113560 intron toc - chr2L_20_3110001 chr2L_3110001 RAL-321 87 chr2L 3115546 3115578 chr2L 3115642 3115673 16 95 6.0 0.5 3.2 3.8 127 chr2L 3115546 intron toc - chr2L 3115610 intron toc - chr2L 3115673 intron toc - chr2L_16_3115001 chr2L_3115001 RAL-321 88 chr2L 3135067 3135077 chr2L 3135216 3135225 5 149 21.0 3.0 12.0 0.4 158 chr2L 3135067 intron toc - chr2L 3135146 intron toc - chr2L 3135225 intron toc - chr2L_5_3135001 chr2L_3135001 RAL-321 89 chr2L 3135083 3135121 chr2L 3135215 3135259 11 139 5.0 3.0 4.0 2.2 176 chr2L 3135083 intron toc - chr2L 3135171 intron toc - chr2L 3135259 intron toc - chr2L_11_3135001 chr2L_3135001 RAL-321 90 chr2L 3172070 3172095 chr2L 3172173 3172210 10 111 4.5 15.5 10.0 0.9 140 chr2L 3172070 intergenic not near genes chr2L 3172140 intergenic not near genes chr2L 3172210 intergenic not near genes chr2L_10_3170001 chr2L_3170001 RAL-321 91 chr2L 3202721 3202770 chr2L 3210170 3210219 mdg1 25 7448 5.0 0.0 2.5 7.1 7498 chr2L 3202721 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210219 intergenic CR45336 + chr2L_25_3205001 chr2L_3205001 RAL-321 92 chr2L 3233617 3233659 chr2L 3233787 3233830 23 171 4.0 3.5 3.8 4.8 213 chr2L 3233617 intergenic not near genes chr2L 3233724 intergenic not near genes chr2L 3233830 intergenic not near genes chr2L_23_3230001 chr2L_3230001 RAL-321 93 chr2L 3251476 3251525 chr2L 3259061 3259110 springer 23 7585 4.0 7.5 5.8 3.4 7634 chr2L 3251476 intergenic not near genes chr2L 3255293 intergenic not near genes chr2L 3259110 intergenic not near genes chr2L_23_3255001 chr2L_3255001 RAL-321 94 chr2L 3261494 3261509 chr2L 3261606 3261621 8 112 7.5 15.0 11.2 0.7 127 chr2L 3261494 intergenic CR45338 -,CR45337 - chr2L 3261558 intergenic CR45338 -,CR45337 - chr2L 3261621 intergenic CR45338 -,CR45337 - chr2L_8_3260001 chr2L_3260001 RAL-321 95 chr2L 3279939 3279954 chr2L 3280040 3280055 5 101 7.0 5.0 6.0 0.7 116 chr2L 3279939 intron CG3332 - chr2L 3279997 intron CG3332 - chr2L 3280055 intron CG3332 - chr2L_5_3275001 chr2L_3275001 RAL-321 96 chr2L 3291217 3291270 chr2L 3291317 3291370 28 94 4.5 3.5 4.0 5.6 153 chr2L 3291217 intergenic CG9664 - chr2L 3291294 3` UTR CG9664 - chr2L 3291370 3` UTR CG9664 - chr2L_28_3290001 chr2L_3290001 RAL-321 97 chr2L 3294340 3294384 chr2L 3294457 3294501 22 115 7.5 7.5 7.5 2.6 161 chr2L 3294340 5` UTR CG9664 - chr2L 3294420 5` UTR CG9664 - chr2L 3294501 5` UTR CG9664 - chr2L_22_3290001 chr2L_3290001 RAL-321 98 chr2L 3323243 3323283 chr2L 3323370 3323410 25 125 8.0 8.0 8.0 2.8 167 chr2L 3323243 intergenic CG8837 + chr2L 3323326 intergenic CG8837 + chr2L 3323410 intergenic CG8837 + chr2L_25_3320001 chr2L_3320001 RAL-321 99 chr2L 3388578 3388629 chr2L 3388839 3388890 pogo 23 260 6.5 5.0 5.8 3.4 312 chr2L 3388578 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388890 intergenic CG42460 -,CR44791 + chr2L_23_3385001 chr2L_3385001 RAL-321 100 chr2L 3505426 3505432 chr2L 3505543 3505549 5 117 13.5 2.0 7.8 0.6 123 chr2L 3505426 intron tim - chr2L 3505488 intron tim - chr2L 3505549 intron tim - chr2L_5_3505001 chr2L_3505001 RAL-321 101 chr2L 3505435 3505471 chr2L 3505542 3505588 9 116 4.5 2.0 3.2 2.1 153 chr2L 3505435 intron tim - chr2L 3505512 intron tim - chr2L 3505588 intron tim - chr2L_9_3505001 chr2L_3505001 RAL-321 102 chr2L 3508353 3508376 chr2L 3508451 3508474 15 98 0.0 13.0 6.5 2.0 121 chr2L 3508353 intergenic tim -,CR45299 + chr2L 3508414 intergenic CR45299 +,tim - chr2L 3508474 intergenic CR45299 +,tim - chr2L_15_3505001 chr2L_3505001 RAL-321 103 chr2L 3569952 3569982 chr2L 3570093 3570113 10 139 8.5 0.0 4.2 1.9 161 chr2L 3569952 intergenic not near genes chr2L 3570032 intergenic not near genes chr2L 3570113 intergenic not near genes chr2L_10_3570001 chr2L_3570001 RAL-321 104 chr2L 3582878 3582903 chr2L 3582975 3583000 11 97 2.0 8.5 5.2 1.8 122 chr2L 3582878 intergenic not near genes chr2L 3582939 intergenic not near genes chr2L 3583000 intergenic not near genes chr2L_11_3580001 chr2L_3580001 RAL-321 105 chr2L 3601067 3601120 chr2L 3601172 3601220 19 103 5.5 1.0 3.2 4.5 153 chr2L 3601067 intergenic not near genes chr2L 3601144 intergenic not near genes chr2L 3601220 intergenic not near genes chr2L_19_3600001 chr2L_3600001 RAL-321 106 chr2L 3632247 3632277 chr2L 3632344 3632374 16 96 1.5 3.0 2.2 5.0 127 chr2L 3632247 intron for - chr2L 3632310 intron for - chr2L 3632374 intron for - chr2L_16_3630001 chr2L_3630001 RAL-321 107 chr2L 3646920 3646944 chr2L 3647257 3647281 11 334 49.5 28.5 39.0 0.3 361 chr2L 3646920 intron for - chr2L 3647100 intron for - chr2L 3647281 intron for - chr2L_11_3645001 chr2L_3645001 RAL-321 108 chr2L 3646912 3646932 chr2L 3647284 3647294 8 342 45.0 23.5 34.2 0.2 382 chr2L 3646912 intron for - chr2L 3647103 intron for - chr2L 3647294 intron for - chr2L_8_3645001 chr2L_3645001 RAL-321 109 chr2L 3649762 3649804 chr2L 3654989 3655026 copia 12 5220 0.0 9.5 4.8 2.1 5264 chr2L 3649762 intron for - chr2L 3652394 intron for - chr2L 3655026 intron for - chr2L_12_3650001 chr2L_3650001 RAL-321 110 chr2L 3688309 3688319 chr2L 3688412 3688422 6 103 3.0 0.5 1.8 2.1 113 chr2L 3688309 intron CG34340 + chr2L 3688366 intron CG34340 + chr2L 3688422 intron CG34340 + chr2L_6_3685001 chr2L_3685001 RAL-321 111 chr2L 3717169 3717214 chr2L 3717295 3717343 19 127 8.0 10.0 9.0 1.9 174 chr2L 3717169 exon lectin-24A - chr2L 3717256 exon lectin-24A - chr2L 3717343 exon lectin-24A - chr2L_19_3715001 chr2L_3715001 RAL-321 112 chr2L 3784790 3784808 chr2L 3785669 3785687 11 879 41.5 30.5 36.0 0.3 897 chr2L 3784790 intergenic CG31960 + chr2L 3785238 exon CG31960 + chr2L 3785687 intergenic CG31958 +,CG31960 + chr2L_11_3785001 chr2L_3785001 RAL-321 113 chr2L 3784697 3784722 chr2L 3785613 3785638 9 918 50.5 40.5 45.5 0.2 941 chr2L 3784697 intergenic CG31960 + chr2L 3785168 exon CG31960 + chr2L 3785638 intergenic CG31960 +,CG31958 + chr2L_9_3785001 chr2L_3785001 RAL-321 114 chr2L 3784725 3784737 chr2L 3786362 3786381 8 1639 51.5 23.5 37.5 0.2 1656 chr2L 3784725 intergenic CG31960 + chr2L 3785553 3` UTR CG31960 + chr2L 3786381 intergenic CG31958 + chr2L_8_3785001 chr2L_3785001 RAL-321 115 chr2L 3819012 3819058 chr2L 3819114 3819160 20 101 5.5 0.0 2.8 5.3 148 chr2L 3819012 intergenic CR44077 + chr2L 3819086 intergenic not near genes chr2L 3819160 intergenic not near genes chr2L_20_3815001 chr2L_3815001 RAL-321 116 chr2L 3831822 3831864 chr2L 3831918 3831965 20 101 4.0 4.5 4.2 3.8 143 chr2L 3831822 intergenic not near genes chr2L 3831894 intergenic not near genes chr2L 3831965 intergenic not near genes chr2L_20_3830001 chr2L_3830001 RAL-321 117 chr2L 3844326 3844337 chr2L 3844458 3844469 8 131 10.0 5.0 7.5 0.9 143 chr2L 3844326 intergenic not near genes chr2L 3844398 intergenic not near genes chr2L 3844469 intergenic not near genes chr2L_8_3840001 chr2L_3840001 RAL-321 118 chr2L 3891874 3891925 chr2L 3891979 3892030 26 103 6.0 8.5 7.2 3.2 156 chr2L 3891874 intron capu - chr2L 3891952 intron capu - chr2L 3892030 intron capu - chr2L_26_3890001 chr2L_3890001 RAL-321 119 chr2L 3898251 3898307 chr2L 3898356 3898405 12 102 0.0 3.5 1.8 4.3 154 chr2L 3898251 intron capu - chr2L 3898328 intron capu - chr2L 3898405 intron capu - chr2L_12_3895001 chr2L_3895001 RAL-321 120 chr2L 3936635 3936655 chr2L 3936735 3936755 11 99 4.5 5.0 4.8 1.9 120 chr2L 3936635 intron fred - chr2L 3936695 intron fred - chr2L 3936755 intron fred - chr2L_11_3935001 chr2L_3935001 RAL-321 121 chr2L 3943775 3943827 chr2L 3943886 3943938 25 110 4.5 5.0 4.8 4.3 163 chr2L 3943775 intron fred - chr2L 3943856 intron fred - chr2L 3943938 intron fred - chr2L_25_3940001 chr2L_3940001 RAL-321 122 chr2L 3959162 3959201 chr2L 3959258 3959297 19 94 9.0 3.5 6.2 2.6 135 chr2L 3959162 intron fred - chr2L 3959230 intron fred - chr2L 3959297 intron fred - chr2L_19_3955001 chr2L_3955001 RAL-321 123 chr2L 4037782 4037807 chr2L 4037889 4037914 7 107 5.0 6.0 5.5 1.1 132 chr2L 4037782 intron ed + chr2L 4037848 intron ed + chr2L 4037914 intron ed + chr2L_7_4035001 chr2L_4035001 RAL-321 124 chr2L 4063877 4063920 chr2L 4063974 4063993 23 90 6.5 7.5 7.0 2.9 116 chr2L 4063877 intron ed + chr2L 4063935 intron ed + chr2L 4063993 intron ed + chr2L_23_4060001 chr2L_4060001 RAL-321 125 chr2L 4066024 4066057 chr2L 4068869 4068902 Juan 14 2842 4.0 6.5 5.2 2.3 2878 chr2L 4066024 intron ed + chr2L 4067463 intron ed + chr2L 4068902 intron ed + chr2L_14_4065001 chr2L_4065001 RAL-321 126 chr2L 4076100 4076127 chr2L 4076193 4076231 7 98 0.0 2.0 1.0 3.5 131 chr2L 4076100 intron ed + chr2L 4076166 intron ed + chr2L 4076231 intron ed + chr2L_7_4075001 chr2L_4075001 RAL-321 127 chr2L 4125225 4125279 chr2L 4125350 4125404 22 124 1.5 2.5 2.0 7.3 179 chr2L 4125225 intergenic not near genes chr2L 4125314 intergenic not near genes chr2L 4125404 intergenic not near genes chr2L_22_4125001 chr2L_4125001 RAL-321 128 chr2L 4150635 4150656 chr2L 4150725 4150744 7 94 1.0 9.0 5.0 1.2 109 chr2L 4150635 exon CG2955 + chr2L 4150690 exon CG2955 + chr2L 4150744 exon CG2955 + chr2L_7_4150001 chr2L_4150001 RAL-321 129 chr2L 4157344 4157381 chr2L 4157475 4157512 13 130 2.5 6.5 4.5 2.4 168 chr2L 4157344 intergenic not near genes chr2L 4157428 intergenic not near genes chr2L 4157512 intergenic not near genes chr2L_13_4155001 chr2L_4155001 RAL-321 130 chr2L 4166357 4166411 chr2L 4166460 4166514 32 103 4.5 7.0 5.8 4.7 157 chr2L 4166357 intergenic Or24a - chr2L 4166436 intergenic Or24a - chr2L 4166514 intergenic Or24a - chr2L_32_4165001 chr2L_4165001 RAL-321 131 chr2L 4181292 4181304 chr2L 4183944 4183956 Burdock 5 2652 6.5 13.5 10.0 0.5 2664 chr2L 4181292 intergenic not near genes chr2L 4182624 intergenic not near genes chr2L 4183956 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-321 132 chr2L 4184453 4184502 chr2L 4184792 4184840 6 339 0.5 5.5 3.0 1.5 387 chr2L 4184453 intergenic not near genes chr2L 4184646 intergenic not near genes chr2L 4184840 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-321 133 chr2L 4224402 4224425 chr2L 4224486 4224504 13 96 3.5 12.0 7.8 1.5 102 chr2L 4224402 intergenic CG3702 - chr2L 4224453 intergenic CG3702 - chr2L 4224504 intergenic CG3702 - chr2L_13_4220001 chr2L_4220001 RAL-321 134 chr2L 4256570 4256574 chr2L 4256670 4256674 4 100 0.0 11.5 5.8 0.6 104 chr2L 4256570 intergenic CR45295 -,CR45296 -,CR45294 - chr2L 4256622 intergenic CR45295 -,CR45296 - chr2L 4256674 intergenic CR45296 -,CR45295 - chr2L_4_4255001 chr2L_4255001 RAL-321 135 chr2L 4265641 4265679 chr2L 4265751 4265789 10 105 3.0 2.5 2.8 2.6 148 chr2L 4265641 intergenic not near genes chr2L 4265715 intergenic not near genes chr2L 4265789 intergenic not near genes chr2L_10_4265001 chr2L_4265001 RAL-321 136 chr2L 4601685 4601730 chr2L 4609146 4609191 mdg1 23 7461 5.5 4.5 5.0 3.8 7506 chr2L 4601685 intron dp - chr2L 4605438 intron dp - chr2L 4609191 intron dp - chr2L_23_4605001 chr2L_4605001 RAL-321 137 chr2L 4819473 4819518 chr2L 4819616 4819661 15 140 5.5 8.5 7.0 1.9 188 chr2L 4819473 intergenic not near genes chr2L 4819567 intergenic not near genes chr2L 4819661 intergenic not near genes chr2L_15_4815001 chr2L_4815001 RAL-321 138 chr2L 4858444 4858480 chr2L 4858552 4858588 14 108 8.0 0.5 4.2 2.7 144 chr2L 4858444 intron pog + chr2L 4858516 intron pog + chr2L 4858588 intron pog + chr2L_14_4855001 chr2L_4855001 RAL-321 139 chr2L 4892888 4892895 chr2L 4892991 4892998 6 102 1.0 7.5 4.2 1.2 110 chr2L 4892888 intron CG3036 + chr2L 4892943 intron CG3036 + chr2L 4892998 intron CG3036 + chr2L_6_4890001 chr2L_4890001 RAL-321 140 chr2L 4914695 4914739 chr2L 4914783 4914838 26 97 7.5 3.5 5.5 4.0 143 chr2L 4914695 intron hoe1 - chr2L 4914766 intron hoe1 - chr2L 4914838 intron hoe1 - chr2L_26_4910001 chr2L_4910001 RAL-321 141 chr2L 4918147 4918169 chr2L 4923240 4923244 jockey 6 5090 15.0 1.0 8.0 0.7 5097 chr2L 4918147 intron hoe1 - chr2L 4920696 intron hoe1 - chr2L 4923244 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-321 142 chr2L 4925653 4925696 chr2L 4925752 4925795 9 99 5.0 1.5 3.2 2.1 142 chr2L 4925653 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925795 intron hoe1 - chr2L_9_4925001 chr2L_4925001 RAL-321 143 chr2L 5027942 5027981 chr2L 5028046 5028084 15 100 15.0 10.0 12.5 1.1 142 chr2L 5027942 intron vkg - chr2L 5028013 intron vkg - chr2L 5028084 intron vkg - chr2L_15_5025001 chr2L_5025001 RAL-321 144 chr2L 5027983 5027991 chr2L 5028041 5028095 6 96 12.0 9.0 10.5 0.5 112 chr2L 5027983 intron vkg - chr2L 5028039 intron vkg - chr2L 5028095 intron vkg - chr2L_6_5025001 chr2L_5025001 RAL-321 145 chr2L 5083730 5083775 chr2L 5083826 5083871 33 95 5.5 5.5 5.5 5.1 141 chr2L 5083730 intron pgant5 - chr2L 5083800 intron pgant5 - chr2L 5083871 intron pgant5 - chr2L_33_5080001 chr2L_5080001 RAL-321 146 chr2L 5092397 5092440 chr2L 5092504 5092547 23 108 3.5 8.0 5.8 3.4 150 chr2L 5092397 intron pgant5 - chr2L 5092472 intron pgant5 - chr2L 5092547 intron pgant5 - chr2L_23_5090001 chr2L_5090001 RAL-321 147 chr2L 5120955 5121003 chr2L 5121069 5121117 16 113 7.0 3.0 5.0 2.7 162 chr2L 5120955 intron Msp300 + chr2L 5121036 intron Msp300 + chr2L 5121117 intron Msp300 + chr2L_16_5120001 chr2L_5120001 RAL-321 148 chr2L 5248358 5248404 chr2L 5249516 5249546 19 1155 6.0 5.0 5.5 2.9 1188 chr2L 5248358 intron tkv - chr2L 5248952 intron tkv - chr2L 5249546 intron tkv - chr2L_19_5245001 chr2L_5245001 RAL-321 149 chr2L 5265648 5265654 chr2L 5270065 5270071 5 4417 28.0 13.5 20.8 0.2 4423 chr2L 5265648 intron,exon tkv -,Cyp4ac1 + chr2L 5267860 intron,exon tkv -,Cyp4ac2 + chr2L 5270071 intron,exon tkv -,Cyp4ac3 + chr2L_5_5265001 chr2L_5265001 RAL-321 150 chr2L 5296927 5296980 chr2L 5297037 5297090 14 102 8.0 3.5 5.8 2.1 163 chr2L 5296927 intron vri + chr2L 5297008 intron vri + chr2L 5297090 intron vri + chr2L_14_5295001 chr2L_5295001 RAL-321 151 chr2L 5342751 5342800 chr2L 5345151 5345200 Doc 24 2400 4.5 7.0 5.8 3.5 2449 chr2L 5342751 intergenic not near genes chr2L 5343976 intergenic not near genes chr2L 5345200 intergenic not near genes chr2L_24_5340001 chr2L_5340001 RAL-321 152 chr2L 5380224 5380228 chr2L 5380339 5380343 6 115 19.0 17.5 18.2 0.3 119 chr2L 5380224 3` UTR CR42850 - chr2L 5380284 3` UTR CR42850 - chr2L 5380343 intron CR42850 - chr2L_6_5380001 chr2L_5380001 RAL-321 153 chr2L 5380232 5380242 chr2L 5380327 5380346 6 102 13.0 14.0 13.5 0.4 114 chr2L 5380232 3` UTR CR42850 - chr2L 5380289 3` UTR CR42850 - chr2L 5380346 intron CR42850 - chr2L_6_5380001 chr2L_5380001 RAL-321 154 chr2L 5448013 5448018 chr2L 5448116 5448122 6 104 0.0 1.5 0.8 3.3 109 chr2L 5448013 intergenic not near genes chr2L 5448068 intergenic not near genes chr2L 5448122 intergenic not near genes chr2L_6_5445001 chr2L_5445001 RAL-321 155 chr2L 5488000 5488032 chr2L 5488100 5488132 10 99 7.5 4.5 6.0 1.4 132 chr2L 5488000 intergenic not near genes chr2L 5488066 intergenic not near genes chr2L 5488132 intergenic not near genes chr2L_10_5485001 chr2L_5485001 RAL-321 156 chr2L 5494535 5494582 chr2L 5494650 5494699 12 115 6.0 3.5 4.8 2.1 164 chr2L 5494535 intergenic not near genes chr2L 5494617 intergenic not near genes chr2L 5494699 intergenic not near genes chr2L_12_5490001 chr2L_5490001 RAL-321 157 chr2L 5500049 5500069 chr2L 5500155 5500175 5 106 5.5 13.0 9.2 0.5 126 chr2L 5500049 intergenic not near genes chr2L 5500112 intergenic not near genes chr2L 5500175 intergenic not near genes chr2L_5_5500001 chr2L_5500001 RAL-321 158 chr2L 5563666 5563674 chr2L 5563770 5563776 5 104 3.0 6.0 4.5 0.9 110 chr2L 5563666 intergenic GluRIIB + chr2L 5563721 intergenic GluRIIB + chr2L 5563776 intergenic GluRIIB + chr2L_5_5560001 chr2L_5560001 RAL-321 159 chr2L 5563675 5563694 chr2L 5563769 5563798 12 103 3.0 6.0 4.5 2.2 123 chr2L 5563675 intergenic GluRIIB + chr2L 5563736 intergenic GluRIIB + chr2L 5563798 intergenic GluRIIB + chr2L_12_5560001 chr2L_5560001 RAL-321 160 chr2L 5582171 5582224 chr2L 5582267 5582318 26 95 2.0 4.5 3.2 6.2 147 chr2L 5582171 intergenic not near genes chr2L 5582244 intergenic not near genes chr2L 5582318 intergenic not near genes chr2L_26_5580001 chr2L_5580001 RAL-321 161 chr2L 5593103 5593160 chr2L 5593229 5593286 26 125 4.0 6.5 5.2 4.2 183 chr2L 5593103 intergenic not near genes chr2L 5593194 intergenic not near genes chr2L 5593286 intergenic not near genes chr2L_26_5590001 chr2L_5590001 RAL-321 162 chr2L 5620231 5620253 chr2L 5620327 5620350 15 97 7.5 3.0 5.2 2.4 119 chr2L 5620231 3` UTR CR44796 - chr2L 5620290 intergenic CR44796 -,Cyp6a16 - chr2L 5620350 intergenic CR44796 -,Cyp6a16 - chr2L_15_5620001 chr2L_5620001 RAL-321 163 chr2L 5666306 5666324 chr2L 5666407 5666434 7 103 6.0 7.5 6.8 0.9 128 chr2L 5666306 intron Hsp60C + chr2L 5666370 intron Hsp60C + chr2L 5666434 intron Hsp60C + chr2L_7_5665001 chr2L_5665001 RAL-321 164 chr2L 5749879 5749930 chr2L 5749978 5750006 17 90 7.5 4.0 5.8 2.5 127 chr2L 5749879 intron CG11030 + chr2L 5749942 intron CG11030 + chr2L 5750006 intron CG11030 + chr2L_17_5745001 chr2L_5745001 RAL-321 165 chr2L 5762428 5762473 chr2L 5762533 5762578 14 104 5.5 6.5 6.0 2.0 150 chr2L 5762428 intergenic CG11030 +,obst-E - chr2L 5762503 intergenic obst-E -,CG11030 + chr2L 5762578 3` UTR obst-E - chr2L_14_5760001 chr2L_5760001 RAL-321 166 chr2L 5814670 5814709 chr2L 5814773 5814812 10 103 7.5 2.0 4.8 1.7 142 chr2L 5814670 intergenic not near genes chr2L 5814741 intergenic not near genes chr2L 5814812 intergenic not near genes chr2L_10_5810001 chr2L_5810001 RAL-321 167 chr2L 5819637 5819677 chr2L 5819744 5819784 19 105 6.0 7.5 6.8 2.4 147 chr2L 5819637 intergenic not near genes chr2L 5819710 intergenic not near genes chr2L 5819784 intergenic not near genes chr2L_19_5815001 chr2L_5815001 RAL-321 168 chr2L 5827693 5827740 chr2L 5836721 5836768 roo 27 9026 7.0 5.0 6.0 3.9 9075 chr2L 5827693 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836768 intron TrissinR + chr2L_27_5830001 chr2L_5830001 RAL-321 169 chr2L 5846045 5846097 chr2L 5846262 5846294 24 210 5.5 5.0 5.2 3.9 249 chr2L 5846045 intron TrissinR + chr2L 5846170 intron TrissinR + chr2L 5846294 intron TrissinR + chr2L_24_5845001 chr2L_5845001 RAL-321 170 chr2L 5887584 5887635 chr2L 5887685 5887731 23 101 6.0 6.0 6.0 3.3 147 chr2L 5887584 3` UTR CR44577 - chr2L 5887658 3` UTR CR44577 - chr2L 5887731 3` UTR CR44577 - chr2L_23_5885001 chr2L_5885001 RAL-321 171 chr2L 5900248 5900292 chr2L 5900352 5900404 32 106 7.0 7.0 7.0 4.0 156 chr2L 5900248 3` UTR CR44579 - chr2L 5900326 3` UTR CR44579 - chr2L 5900404 intergenic CR44579 - chr2L_32_5900001 chr2L_5900001 RAL-321 172 chr2L 5904442 5904474 chr2L 5904542 5904574 21 100 4.5 0.0 2.2 6.6 132 chr2L 5904442 exon CG9021 - chr2L 5904508 intron CG9021 - chr2L 5904574 intron CG9021 - chr2L_21_5900001 chr2L_5900001 RAL-321 173 chr2L 5931297 5931332 chr2L 5931429 5931464 20 131 4.0 11.0 7.5 2.4 167 chr2L 5931297 intron dsf + chr2L 5931380 intron dsf + chr2L 5931464 intron dsf + chr2L_20_5930001 chr2L_5930001 RAL-321 174 chr2L 5962247 5962295 chr2L 5962343 5962391 29 95 3.5 5.5 4.5 5.3 144 chr2L 5962247 intergenic not near genes chr2L 5962319 intergenic not near genes chr2L 5962391 intergenic not near genes chr2L_29_5960001 chr2L_5960001 RAL-321 175 chr2L 6050426 6050438 chr2L 6050550 6050562 10 124 15.0 9.5 12.2 0.8 136 chr2L 6050426 3` UTR CG12393 + chr2L 6050494 intergenic CG12393 +,CG9135 + chr2L 6050562 intergenic CG12393 +,CG9135 + chr2L_10_6050001 chr2L_6050001 RAL-321 176 chr2L 6050439 6050467 chr2L 6050549 6050591 15 123 6.0 9.5 7.8 1.7 152 chr2L 6050439 intergenic CG12393 +,CG9135 + chr2L 6050515 intergenic CG12393 +,CG9135 + chr2L 6050591 intergenic CG12393 +,CG9135 + chr2L_15_6050001 chr2L_6050001 RAL-321 177 chr2L 6109550 6109564 chr2L 6109653 6109666 7 102 8.5 11.0 9.8 0.6 116 chr2L 6109550 intron stai + chr2L 6109608 intron stai + chr2L 6109666 intron stai + chr2L_7_6105001 chr2L_6105001 RAL-321 178 chr2L 6109566 6109592 chr2L 6109648 6109659 7 91 4.0 8.5 6.2 1.0 93 chr2L 6109566 intron stai + chr2L 6109612 intron stai + chr2L 6109659 intron stai + chr2L_7_6105001 chr2L_6105001 RAL-321 179 chr2L 6136532 6136574 chr2L 6136649 6136691 9 117 4.5 6.5 5.5 1.4 159 chr2L 6136532 intergenic not near genes chr2L 6136612 intergenic not near genes chr2L 6136691 intergenic not near genes chr2L_9_6135001 chr2L_6135001 RAL-321 180 chr2L 6253599 6253612 chr2L 6253695 6253708 5 96 16.0 3.5 9.8 0.5 109 chr2L 6253599 intron Ddr + chr2L 6253654 intron Ddr + chr2L 6253708 intron Ddr + chr2L_5_6250001 chr2L_6250001 RAL-321 181 chr2L 6283922 6283968 chr2L 6284053 6284079 6 127 5.0 3.0 4.0 1.2 157 chr2L 6283922 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284079 intron Ddr + chr2L_6_6280001 chr2L_6280001 RAL-321 182 chr2L 6294973 6294988 chr2L 6295039 6295065 8 85 0.5 8.0 4.2 1.5 92 chr2L 6294973 intron Ddr + chr2L 6295019 intron Ddr + chr2L 6295065 intron Ddr + chr2L_8_6295001 chr2L_6295001 RAL-321 183 chr2L 6296815 6296868 chr2L 6296972 6297025 15 157 2.5 3.5 3.0 3.8 210 chr2L 6296815 intron Ddr + chr2L 6296920 intron Ddr + chr2L 6297025 exon Ddr + chr2L_15_6295001 chr2L_6295001 RAL-321 184 chr2L 6349058 6349075 chr2L 6349156 6349173 12 98 5.0 5.5 5.2 1.9 115 chr2L 6349058 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349173 intergenic CG9498 - chr2L_12_6345001 chr2L_6345001 RAL-321 185 chr2L 6363129 6363183 chr2L 6366075 6366129 Burdock 25 2943 4.5 3.5 4.0 5.0 3000 chr2L 6363129 intergenic not near genes chr2L 6364629 intergenic not near genes chr2L 6366129 intergenic not near genes chr2L_25_6360001 chr2L_6360001 RAL-321 186 chr2L 6390100 6390150 chr2L 6390203 6390250 4 101 4.0 0.0 2.0 1.3 150 chr2L 6390100 intron CG42368 - chr2L 6390175 intron CG42368 - chr2L 6390250 intron CG42368 - chr2L_4_6390001 chr2L_6390001 RAL-321 187 chr2L 6426837 6426882 chr2L 6445117 6445162 roo 26 18279 4.5 7.0 5.8 3.8 18325 chr2L 6426837 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445162 exon CG9527 - chr2L_26_6435001 chr2L_6435001 RAL-321 188 chr2L 6463536 6463584 chr2L 6463648 6463683 5 106 4.0 4.0 4.0 1.0 147 chr2L 6463536 exon CG16947 - chr2L 6463610 exon CG16947 - chr2L 6463683 exon CG16947 - chr2L_5_6460001 chr2L_6460001 RAL-321 189 chr2L 6504564 6504612 chr2L 6504662 6504668 15 92 5.5 5.0 5.2 2.4 104 chr2L 6504564 intron CG31637 + chr2L 6504616 intron CG31637 + chr2L 6504668 intron CG31637 + chr2L_15_6500001 chr2L_6500001 RAL-321 190 chr2L 6544362 6544394 chr2L 6544468 6544506 22 110 0.0 1.5 0.8 12.2 144 chr2L 6544362 intron eya - chr2L 6544434 intron eya - chr2L 6544506 intron eya - chr2L_22_6540001 chr2L_6540001 RAL-321 191 chr2L 6640887 6640939 chr2L 6641002 6641054 22 113 5.0 4.0 4.5 4.0 167 chr2L 6640887 exon CG31635 - chr2L 6640970 intron CG31635 - chr2L 6641054 intron CG31635 - chr2L_22_6640001 chr2L_6640001 RAL-321 192 chr2L 6655505 6655544 chr2L 6655887 6655910 11 376 5.0 7.0 6.0 1.6 405 chr2L 6655505 exon CG31633 - chr2L 6655708 exon CG31633 - chr2L 6655910 exon CG31633 - chr2L_11_6655001 chr2L_6655001 RAL-321 193 chr2L 6799515 6799572 chr2L 6799623 6799680 20 107 4.0 3.5 3.8 4.2 165 chr2L 6799515 5` UTR CR43610 + chr2L 6799598 5` UTR CR43610 + chr2L 6799680 intergenic CR43610 +,CG17376 - chr2L_20_6795001 chr2L_6795001 RAL-321 194 chr2L 6850359 6850413 chr2L 6850462 6850516 28 103 8.0 5.5 6.8 3.6 157 chr2L 6850359 intergenic not near genes chr2L 6850438 intergenic not near genes chr2L 6850516 intergenic not near genes chr2L_28_6850001 chr2L_6850001 RAL-321 195 chr2L 6876779 6876807 chr2L 6882963 6883017 diver 8 6204 7.5 3.5 5.5 1.2 6238 chr2L 6876779 intron Nlg2 + chr2L 6879898 intron Nlg2 + chr2L 6883017 intron Nlg2 + chr2L_8_6875001 chr2L_6875001 RAL-321 196 chr2L 6971972 6971980 chr2L 6972129 6972137 6 157 7.5 0.0 3.8 1.2 165 chr2L 6971972 intergenic snRNP-U1-70K - chr2L 6972054 intergenic snRNP-U1-70K - chr2L 6972137 intergenic snRNP-U1-70K - chr2L_6_6970001 chr2L_6970001 RAL-321 197 chr2L 6972215 6972263 chr2L 6972658 6972687 5 437 0.0 4.5 2.2 1.6 472 chr2L 6972215 intergenic snRNP-U1-70K - chr2L 6972451 intergenic uif - chr2L 6972687 intergenic uif - chr2L_5_6970001 chr2L_6970001 RAL-321 198 chr2L 6991417 6991434 chr2L 6998556 6998573 HMS-Beagle 5 7138 12.0 3.0 7.5 0.6 7156 chr2L 6991417 intron uif - chr2L 6994995 intron uif - chr2L 6998573 intron uif - chr2L_5_6990001 chr2L_6990001 RAL-321 199 chr2L 7005213 7005254 chr2L 7005328 7005370 16 116 7.0 4.5 5.8 2.4 157 chr2L 7005213 intron uif - chr2L 7005292 intron uif - chr2L 7005370 intron uif - chr2L_16_7005001 chr2L_7005001 RAL-321 200 chr2L 7111738 7111792 chr2L 7111843 7111897 9 105 3.5 5.5 4.5 1.6 159 chr2L 7111738 intron Pvf3 - chr2L 7111818 intron Pvf3 - chr2L 7111897 intron Pvf3 - chr2L_9_7110001 chr2L_7110001 RAL-321 201 chr2L 7125770 7125808 chr2L 7125906 7125943 7 136 5.5 5.0 5.2 1.1 173 chr2L 7125770 intron Pvf3 - chr2L 7125856 intron Pvf3 - chr2L 7125943 intron Pvf3 - chr2L_7_7125001 chr2L_7125001 RAL-321 202 chr2L 7131694 7131748 chr2L 7131829 7131883 20 134 6.0 4.0 5.0 3.3 189 chr2L 7131694 intron Pvf3 - chr2L 7131788 intron Pvf3 - chr2L 7131883 intron Pvf3 - chr2L_20_7130001 chr2L_7130001 RAL-321 203 chr2L 7151818 7151851 chr2L 7152133 7152160 18 315 5.0 7.5 6.2 2.5 342 chr2L 7151818 intron Pvf3 - chr2L 7151989 intron Pvf3 - chr2L 7152160 intron Pvf3 - chr2L_18_7150001 chr2L_7150001 RAL-321 204 chr2L 7197978 7198021 chr2L 7198077 7198120 23 99 7.0 9.0 8.0 2.6 142 chr2L 7197978 intron CG4502 - chr2L 7198049 intron CG4502 - chr2L 7198120 intron CG4502 - chr2L_23_7195001 chr2L_7195001 RAL-321 205 chr2L 7244704 7244754 chr2L 7244849 7244899 16 145 5.0 5.0 5.0 2.7 195 chr2L 7244704 intron Ndae1 - chr2L 7244802 intron Ndae1 - chr2L 7244899 intron Ndae1 - chr2L_16_7240001 chr2L_7240001 RAL-321 206 chr2L 7254525 7254544 chr2L 7254623 7254642 5 98 0.0 10.0 5.0 0.8 117 chr2L 7254525 intergenic not near genes chr2L 7254584 intergenic not near genes chr2L 7254642 intergenic not near genes chr2L_5_7250001 chr2L_7250001 RAL-321 207 chr2L 7325925 7325951 chr2L 7326005 7326026 7 97 4.0 5.5 4.8 1.2 101 chr2L 7325925 intergenic not near genes chr2L 7325976 intergenic not near genes chr2L 7326026 intergenic not near genes chr2L_7_7325001 chr2L_7325001 RAL-321 208 chr2L 7335184 7335229 chr2L 7335301 7335346 21 116 6.5 5.5 6.0 3.0 162 chr2L 7335184 intron Wnt6 + chr2L 7335265 intron Wnt6 + chr2L 7335346 intron Wnt6 + chr2L_21_7335001 chr2L_7335001 RAL-321 209 chr2L 7340046 7340049 chr2L 7340135 7340148 4 96 0.0 11.5 5.8 0.6 102 chr2L 7340046 intron Wnt6 + chr2L 7340097 intron Wnt6 + chr2L 7340148 intron Wnt6 + chr2L_4_7340001 chr2L_7340001 RAL-321 210 chr2L 7343305 7343358 chr2L 7350441 7350484 roo 17 7132 6.0 5.5 5.8 2.5 7179 chr2L 7343305 intron Wnt6 + chr2L 7346894 intron Wnt6 + chr2L 7350484 intron Wnt6 + chr2L_17_7345001 chr2L_7345001 RAL-321 211 chr2L 7362408 7362449 chr2L 7362509 7362562 11 111 2.5 5.0 3.8 2.3 154 chr2L 7362408 intergenic not near genes chr2L 7362485 intergenic not near genes chr2L 7362562 intergenic not near genes chr2L_11_7360001 chr2L_7360001 RAL-321 212 chr2L 7395133 7395143 chr2L 7395503 7395514 7 371 17.5 10.0 13.8 0.5 381 chr2L 7395133 intron CG5160 - chr2L 7395324 intron CG5160 - chr2L 7395514 intron CG5160 - chr2L_7_7395001 chr2L_7395001 RAL-321 213 chr2L 7395145 7395179 chr2L 7395501 7395550 15 369 7.0 10.0 8.5 1.6 405 chr2L 7395145 intron CG5160 - chr2L 7395348 intron CG5160 - chr2L 7395550 intron CG5160 - chr2L_15_7395001 chr2L_7395001 RAL-321 214 chr2L 7410667 7410674 chr2L 7410782 7410789 8 115 0.0 17.5 8.8 0.8 122 chr2L 7410667 intergenic CG15818 + chr2L 7410728 intergenic CG15818 + chr2L 7410789 intergenic CG15818 + chr2L_8_7410001 chr2L_7410001 RAL-321 215 chr2L 7436190 7436215 chr2L 7436298 7436329 8 113 3.0 3.5 3.2 1.9 139 chr2L 7436190 intergenic not near genes chr2L 7436260 intergenic not near genes chr2L 7436329 intergenic not near genes chr2L_8_7435001 chr2L_7435001 RAL-321 216 chr2L 7439446 7439451 chr2L 7439545 7439550 4 99 0.0 14.0 7.0 0.5 104 chr2L 7439446 intron CG5973 + chr2L 7439498 intron CG5973 + chr2L 7439550 intron CG5973 + chr2L_4_7435001 chr2L_7435001 RAL-321 217 chr2L 7516311 7516359 chr2L 7516445 7516469 20 129 4.5 6.5 5.5 3.1 158 chr2L 7516311 intron RapGAP1 - chr2L 7516390 intron RapGAP1 - chr2L 7516469 intron RapGAP1 - chr2L_20_7515001 chr2L_7515001 RAL-321 218 chr2L 7555712 7555762 chr2L 7555816 7555866 27 103 5.0 2.5 3.8 5.6 154 chr2L 7555712 intron RapGAP1 - chr2L 7555789 intron RapGAP1 - chr2L 7555866 intron RapGAP1 - chr2L_27_7555001 chr2L_7555001 RAL-321 219 chr2L 7579173 7579210 chr2L 7579384 7579421 BS 15 211 7.0 0.0 3.5 3.3 248 chr2L 7579173 intergenic RapGAP1 - chr2L 7579297 intergenic RapGAP1 - chr2L 7579421 intergenic RapGAP1 - chr2L_15_7575001 chr2L_7575001 RAL-321 220 chr2L 7579869 7579919 chr2L 7579971 7580021 24 102 7.0 5.5 6.2 3.3 152 chr2L 7579869 intergenic not near genes chr2L 7579945 intergenic not near genes chr2L 7580021 intergenic not near genes chr2L_24_7575001 chr2L_7575001 RAL-321 221 chr2L 7640407 7640422 chr2L 7640513 7640528 8 106 3.0 5.0 4.0 1.6 121 chr2L 7640407 intergenic not near genes chr2L 7640468 intergenic not near genes chr2L 7640528 intergenic not near genes chr2L_8_7640001 chr2L_7640001 RAL-321 222 chr2L 7742513 7742570 chr2L 7742613 7742670 13 96 1.5 3.5 2.5 3.7 157 chr2L 7742513 intergenic not near genes chr2L 7742592 intergenic not near genes chr2L 7742670 intergenic not near genes chr2L_13_7740001 chr2L_7740001 RAL-321 223 chr2L 7750035 7750066 chr2L 7750127 7750163 16 101 9.0 9.0 9.0 1.6 128 chr2L 7750035 intergenic not near genes chr2L 7750099 intergenic not near genes chr2L 7750163 intergenic not near genes chr2L_16_7750001 chr2L_7750001 RAL-321 224 chr2L 7766624 7766659 chr2L 7766705 7766752 12 83 4.0 0.0 2.0 4.0 128 chr2L 7766624 intergenic not near genes chr2L 7766688 intergenic not near genes chr2L 7766752 intergenic not near genes chr2L_12_7765001 chr2L_7765001 RAL-321 225 chr2L 7859559 7859613 chr2L 7859696 7859750 23 134 8.5 7.0 7.8 2.6 191 chr2L 7859559 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859654 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859750 3` UTR,intron lectin-28C +,TwdlE - chr2L_23_7855001 chr2L_7855001 RAL-321 226 chr2L 7863035 7863075 chr2L 7863807 7863847 16 770 4.0 2.5 3.2 3.8 812 chr2L 7863035 intergenic not near genes chr2L 7863441 intergenic not near genes chr2L 7863847 intergenic not near genes chr2L_16_7860001 chr2L_7860001 RAL-321 227 chr2L 7977072 7977083 chr2L 7984065 7984078 297 5 6995 14.0 3.5 8.8 0.5 7006 chr2L 7977072 intron Snoo - chr2L 7980575 intron Snoo - chr2L 7984078 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 RAL-321 228 chr2L 7977091 7977112 chr2L 7984063 7984094 297 5 6984 7.5 2.5 5.0 0.8 7003 chr2L 7977091 intron Snoo - chr2L 7980592 intron Snoo - chr2L 7984094 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 RAL-321 229 chr2L 7986908 7986913 chr2L 7987014 7987019 4 106 3.0 12.5 7.8 0.5 111 chr2L 7986908 3` UTR pes - chr2L 7986964 3` UTR pes - chr2L 7987019 3` UTR pes - chr2L_4_7985001 chr2L_7985001 RAL-321 230 chr2L 8003009 8003116 chr2L 8003112 8003222 10 116 0.5 0.5 0.5 6.7 213 chr2L 8003009 intron Wwox - chr2L 8003116 intron Wwox - chr2L 8003222 intron Wwox - chr2L_10_8000001 chr2L_8000001 RAL-321 231 chr2L 8013595 8013612 chr2L 8018820 8018837 copia 8 5225 16.0 0.0 8.0 0.9 5242 chr2L 8013595 intron Tg + chr2L 8016216 intron Tg + chr2L 8018837 intron Tg + chr2L_8_8015001 chr2L_8015001 RAL-321 232 chr2L 8013627 8013641 chr2L 8023583 8023597 copia 9 9956 8.5 7.5 8.0 1.0 9970 chr2L 8013627 intron Tg + chr2L 8018612 intron Tg + chr2L 8023597 intron Tg + chr2L_9_8015001 chr2L_8015001 RAL-321 233 chr2L 8018823 8018828 chr2L 8023617 8023632 Doc 4 4802 0.5 13.5 7.0 0.5 4809 chr2L 8018823 intron Tg + chr2L 8021228 intron Tg + chr2L 8023632 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-321 234 chr2L 8044075 8044123 chr2L 8044174 8044222 26 98 5.0 3.0 4.0 5.2 147 chr2L 8044075 intron CG7466 + chr2L 8044148 intron CG7466 + chr2L 8044222 intron CG7466 + chr2L_26_8040001 chr2L_8040001 RAL-321 235 chr2L 8105759 8105792 chr2L 8106840 8106895 8 1098 25.0 31.5 28.2 0.3 1136 chr2L 8105759 exon Bsg + chr2L 8106327 intron Bsg + chr2L 8106895 exon Bsg + chr2L_8_8105001 chr2L_8105001 RAL-321 236 chr2L 8106936 8107149 chr2L 8107074 8107269 21 132 27.5 27.0 27.2 0.7 333 chr2L 8106936 exon Bsg + chr2L 8107102 exon Bsg + chr2L 8107269 exon Bsg + chr2L_21_8105001 chr2L_8105001 RAL-321 237 chr2L 8107406 8107415 chr2L 8107753 8107797 5 370 36.0 32.0 34.0 0.1 391 chr2L 8107406 exon Bsg + chr2L 8107602 intron Bsg + chr2L 8107797 exon Bsg + chr2L_5_8105001 chr2L_8105001 RAL-321 238 chr2L 8108891 8108940 chr2L 8109007 8109056 28 116 7.0 6.0 6.5 3.7 165 chr2L 8108891 3` UTR Bsg + chr2L 8108974 3` UTR Bsg + chr2L 8109056 3` UTR Bsg + chr2L_28_8105001 chr2L_8105001 RAL-321 239 chr2L 8164563 8164611 chr2L 8164665 8164713 15 101 6.5 7.5 7.0 1.9 150 chr2L 8164563 intron Piezo + chr2L 8164638 intron Piezo + chr2L 8164713 intron Piezo + chr2L_15_8160001 chr2L_8160001 RAL-321 240 chr2L 8171279 8171300 chr2L 8171380 8171401 9 101 0.0 10.5 5.2 1.5 122 chr2L 8171279 intron Piezo + chr2L 8171340 intron Piezo + chr2L 8171401 intron Piezo + chr2L_9_8170001 chr2L_8170001 RAL-321 241 chr2L 8184899 8184946 chr2L 8185010 8185056 22 111 6.0 4.0 5.0 3.7 157 chr2L 8184899 intron Piezo + chr2L 8184978 intron Piezo + chr2L 8185056 intron Piezo + chr2L_22_8180001 chr2L_8180001 RAL-321 242 chr2L 8244711 8244749 chr2L 8244853 8244891 12 142 1.0 5.0 3.0 3.0 180 chr2L 8244711 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244891 intron CG8086 - chr2L_12_8240001 chr2L_8240001 RAL-321 243 chr2L 8271641 8271655 chr2L 8271737 8271751 9 96 0.0 15.0 7.5 1.1 110 chr2L 8271641 intron Btk29A - chr2L 8271696 intron Btk29A - chr2L 8271751 intron Btk29A - chr2L_9_8270001 chr2L_8270001 RAL-321 244 chr2L 8286285 8286329 chr2L 8286382 8286426 19 104 4.0 5.5 4.8 3.3 141 chr2L 8286285 intron Btk29A - chr2L 8286356 intron Btk29A - chr2L 8286426 intron Btk29A - chr2L_19_8285001 chr2L_8285001 RAL-321 245 chr2L 8294358 8294398 chr2L 8294669 8294703 19 307 11.5 7.0 9.2 1.9 345 chr2L 8294358 intron Btk29A - chr2L 8294530 intron Btk29A - chr2L 8294703 intron Btk29A - chr2L_19_8290001 chr2L_8290001 RAL-321 246 chr2L 8336926 8336931 chr2L 8337025 8337030 5 99 8.5 5.5 7.0 0.6 104 chr2L 8336926 intergenic not near genes chr2L 8336978 intergenic not near genes chr2L 8337030 intergenic not near genes chr2L_5_8335001 chr2L_8335001 RAL-321 247 chr2L 8336932 8336967 chr2L 8337021 8337066 11 94 1.5 5.5 3.5 2.4 134 chr2L 8336932 intergenic not near genes chr2L 8336999 intergenic not near genes chr2L 8337066 intergenic not near genes chr2L_11_8335001 chr2L_8335001 RAL-321 248 chr2L 8451846 8451860 chr2L 8451962 8451997 8 133 3.0 7.5 5.2 1.3 151 chr2L 8451846 5` UTR fu12 - chr2L 8451922 intron fu12 - chr2L 8451997 intron fu12 - chr2L_8_8450001 chr2L_8450001 RAL-321 249 chr2L 8452403 8452447 chr2L 8461594 8461638 roo 24 9191 3.5 9.5 6.5 3.2 9235 chr2L 8452403 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461638 intron fu12 - chr2L_24_8455001 chr2L_8455001 RAL-321 250 chr2L 8510118 8510172 chr2L 8510227 8510281 16 109 3.0 4.0 3.5 3.6 163 chr2L 8510118 exon CG13096 - chr2L 8510200 intron CG13096 - chr2L 8510281 intron CG13096 - chr2L_16_8510001 chr2L_8510001 RAL-321 251 chr2L 8538144 8538154 chr2L 8538240 8538250 8 96 17.0 0.5 8.8 0.8 106 chr2L 8538144 intron CG17834 + chr2L 8538197 intron CG17834 + chr2L 8538250 intron CG17834 + chr2L_8_8535001 chr2L_8535001 RAL-321 252 chr2L 8588531 8588570 chr2L 8588642 8588681 16 105 6.0 9.5 7.8 1.8 150 chr2L 8588531 intron Sema-1a + chr2L 8588606 intron Sema-1a + chr2L 8588681 intron Sema-1a + chr2L_16_8585001 chr2L_8585001 RAL-321 253 chr2L 8594449 8594496 chr2L 8601523 8601570 297 15 7073 6.5 3.5 5.0 2.5 7121 chr2L 8594449 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598010 intron Sema-1a + chr2L 8601570 intron Sema-1a + chr2L_15_8595001 chr2L_8595001 RAL-321 254 chr2L 8612834 8612869 chr2L 8612931 8612966 17 97 7.5 7.5 7.5 2.0 132 chr2L 8612834 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612966 intron Sema-1a + chr2L_17_8610001 chr2L_8610001 RAL-321 255 chr2L 8689683 8689734 chr2L 8689800 8689840 26 114 5.5 5.5 5.5 4.0 157 chr2L 8689683 intron Hnf4 - chr2L 8689762 intron Hnf4 - chr2L 8689840 exon Hnf4 - chr2L_26_8685001 chr2L_8685001 RAL-321 256 chr2L 8698310 8698351 chr2L 8698469 8698510 18 158 9.0 0.0 4.5 3.3 200 chr2L 8698310 intron Hnf4 - chr2L 8698410 intron Hnf4 - chr2L 8698510 intron Hnf4 - chr2L_18_8695001 chr2L_8695001 RAL-321 257 chr2L 8723095 8723145 chr2L 8731492 8731542 Tirant 31 8397 3.5 7.0 5.2 5.0 8447 chr2L 8723095 intron raw - chr2L 8727318 intron raw - chr2L 8731542 intron raw - chr2L_31_8725001 chr2L_8725001 RAL-321 258 chr2L 8736246 8736259 chr2L 8736346 8736359 4 100 0.0 9.0 4.5 0.7 113 chr2L 8736246 intron raw - chr2L 8736302 intron raw - chr2L 8736359 intron raw - chr2L_4_8735001 chr2L_8735001 RAL-321 259 chr2L 8742751 8742944 chr2L 8742847 8743042 10 97 0.0 0.0 0.0 10.0 291 chr2L 8742751 intergenic not near genes chr2L 8742896 intergenic not near genes chr2L 8743042 intergenic not near genes chr2L_10_8740001 chr2L_8740001 RAL-321 260 chr2L 8799780 8799832 chr2L 8799916 8799968 23 132 2.0 4.5 3.2 5.5 188 chr2L 8799780 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799968 intergenic not near genes chr2L_23_8795001 chr2L_8795001 RAL-321 261 chr2L 8813847 8813859 chr2L 8813944 8813956 5 97 5.5 10.0 7.8 0.6 109 chr2L 8813847 intergenic not near genes chr2L 8813902 intergenic not near genes chr2L 8813956 intergenic not near genes chr2L_5_8810001 chr2L_8810001 RAL-321 262 chr2L 8815725 8815777 chr2L 8815826 8815878 18 99 2.5 5.0 3.8 3.8 153 chr2L 8815725 intergenic not near genes chr2L 8815802 intergenic not near genes chr2L 8815878 intergenic not near genes chr2L_18_8815001 chr2L_8815001 RAL-321 263 chr2L 8829167 8829219 chr2L 8831087 8831139 26 1921 36.5 44.5 40.5 0.6 1972 chr2L 8829167 3` UTR SoxN + chr2L 8830153 intergenic SoxN + chr2L 8831139 intergenic not near genes chr2L_26_8830001 chr2L_8830001 RAL-321 264 chr2L 8891854 8891904 chr2L 8891952 8892003 6 99 2.5 0.0 1.2 2.7 149 chr2L 8891854 3` UTR CG42713 + chr2L 8891928 3` UTR CG42713 + chr2L 8892003 3` UTR CG42713 + chr2L_6_8890001 chr2L_8890001 RAL-321 265 chr2L 8960592 8960643 chr2L 8960950 8961001 25 357 8.0 6.0 7.0 3.1 409 chr2L 8960592 exon CG9525 - chr2L 8960796 exon CG9525 - chr2L 8961001 exon CG9525 - chr2L_25_8960001 chr2L_8960001 RAL-321 266 chr2L 8976204 8976248 chr2L 8976316 8976341 13 110 0.5 4.0 2.2 4.1 137 chr2L 8976204 intergenic not near genes chr2L 8976272 intergenic not near genes chr2L 8976341 intergenic not near genes chr2L_13_8975001 chr2L_8975001 RAL-321 267 chr2L 8980437 8980452 chr2L 8980546 8980561 7 109 10.5 0.0 5.2 1.1 124 chr2L 8980437 intron CG13101 - chr2L 8980499 intron CG13101 - chr2L 8980561 intron CG13101 - chr2L_7_8980001 chr2L_8980001 RAL-321 268 chr2L 8997917 8997962 chr2L 8998055 8998091 18 129 4.0 6.0 5.0 3.0 174 chr2L 8997917 exon CG18661 + chr2L 8998004 exon CG18661 + chr2L 8998091 exon CG18661 + chr2L_18_8995001 chr2L_8995001 RAL-321 269 chr2L 9000263 9000304 chr2L 9007793 9007834 roo 21 7528 4.0 7.0 5.5 3.2 7571 chr2L 9000263 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007834 intergenic not near genes chr2L_21_9000001 chr2L_9000001 RAL-321 270 chr2L 9018050 9018091 chr2L 9018175 9018216 24 124 6.5 8.0 7.2 2.9 166 chr2L 9018050 intergenic not near genes chr2L 9018133 intergenic not near genes chr2L 9018216 intergenic not near genes chr2L_24_9015001 chr2L_9015001 RAL-321 271 chr2L 9023132 9023186 chr2L 9023249 9023254 23 111 5.5 5.0 5.2 3.7 122 chr2L 9023132 intergenic not near genes chr2L 9023193 intergenic not near genes chr2L 9023254 intergenic not near genes chr2L_23_9020001 chr2L_9020001 RAL-321 272 chr2L 9027971 9027982 chr2L 9028073 9028086 7 104 7.0 0.0 3.5 1.6 115 chr2L 9027971 intron,intron CG9582 -,CR44352 - chr2L 9028028 intron,intron CG9582 -,CR44352 - chr2L 9028086 intron,intron CG9582 -,CR44352 - chr2L_7_9025001 chr2L_9025001 RAL-321 273 chr2L 9069661 9069677 chr2L 9069772 9069788 8 110 0.5 0.0 0.2 6.7 127 chr2L 9069661 intron CG31708 - chr2L 9069724 intron CG31708 - chr2L 9069788 intron CG31708 - chr2L_8_9065001 chr2L_9065001 RAL-321 274 chr2L 9084336 9084340 chr2L 16217660 16217660 11 7133322 24.0 30.0 27.0 0.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-321 275 chr2L 9113665 9113706 chr2L 9116981 9117024 16 3306 31.5 52.5 42.0 0.4 3359 chr2L 9113665 intergenic Or30a + chr2L 9115344 intergenic not near genes chr2L 9117024 intergenic not near genes chr2L_16_9115001 chr2L_9115001 RAL-321 276 chr2L 9190614 9190668 chr2L 9190715 9190769 23 99 5.0 5.5 5.2 3.7 155 chr2L 9190614 intron tai + chr2L 9190692 intron tai + chr2L 9190769 intron tai + chr2L_23_9190001 chr2L_9190001 RAL-321 277 chr2L 9190949 9190957 chr2L 9191050 9191058 5 101 0.0 14.5 7.2 0.6 109 chr2L 9190949 intron tai + chr2L 9191004 intron tai + chr2L 9191058 intron tai + chr2L_5_9190001 chr2L_9190001 RAL-321 278 chr2L 9195854 9195882 chr2L 9195955 9195985 22 103 5.0 9.5 7.2 2.7 131 chr2L 9195854 intron tai + chr2L 9195920 intron tai + chr2L 9195985 intron tai + chr2L_22_9195001 chr2L_9195001 RAL-321 279 chr2L 9217974 9217984 chr2L 9222781 9222791 Doc 6 4807 9.0 0.0 4.5 1.1 4817 chr2L 9217974 intron tai + chr2L 9220382 intron tai + chr2L 9222791 intron tai + chr2L_6_9220001 chr2L_9220001 RAL-321 280 chr2L 9227207 9227250 chr2L 9227310 9227353 6 103 3.0 4.5 3.8 1.2 146 chr2L 9227207 intron tai + chr2L 9227280 intron tai + chr2L 9227353 intron tai + chr2L_6_9225001 chr2L_9225001 RAL-321 281 chr2L 9234888 9234927 chr2L 9234990 9235029 15 102 0.0 7.5 3.8 3.1 141 chr2L 9234888 intron tai + chr2L 9234958 intron tai + chr2L 9235029 intron tai + chr2L_15_9230001 chr2L_9230001 RAL-321 282 chr2L 9251135 9251178 chr2L 9251241 9251270 18 113 6.0 3.0 4.5 3.3 135 chr2L 9251135 intergenic aust -,borr - chr2L 9251202 intergenic aust -,borr - chr2L 9251270 intergenic borr -,aust - chr2L_18_9250001 chr2L_9250001 RAL-321 283 chr2L 9264326 9264379 chr2L 9264446 9264499 25 119 5.5 7.5 6.5 3.3 173 chr2L 9264326 intron Ggamma30A + chr2L 9264412 intron Ggamma30A + chr2L 9264499 intron Ggamma30A + chr2L_25_9260001 chr2L_9260001 RAL-321 284 chr2L 9297359 9297404 chr2L 9297456 9297501 20 97 7.5 5.0 6.2 2.8 142 chr2L 9297359 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_20_9295001 chr2L_9295001 RAL-321 285 chr2L 9303494 9303544 chr2L 9303594 9303644 20 99 5.5 5.0 5.2 3.2 150 chr2L 9303494 intergenic not near genes chr2L 9303569 intergenic not near genes chr2L 9303644 intergenic not near genes chr2L_20_9300001 chr2L_9300001 RAL-321 286 chr2L 9347119 9347128 chr2L 9347224 9347225 4 102 12.0 2.0 7.0 0.5 106 chr2L 9347119 intergenic not near genes chr2L 9347172 intergenic not near genes chr2L 9347225 intergenic not near genes chr2L_4_9345001 chr2L_9345001 RAL-321 287 chr2L 9347132 9347170 chr2L 9347220 9347262 16 97 3.5 2.0 2.8 4.2 130 chr2L 9347132 intergenic not near genes chr2L 9347197 intergenic not near genes chr2L 9347262 intergenic not near genes chr2L_16_9345001 chr2L_9345001 RAL-321 288 chr2L 9353350 9353395 chr2L 9353450 9353495 19 98 6.5 7.0 6.8 2.4 145 chr2L 9353350 intergenic not near genes chr2L 9353422 intergenic not near genes chr2L 9353495 intergenic not near genes chr2L_19_9350001 chr2L_9350001 RAL-321 289 chr2L 9362128 9362151 chr2L 9362226 9362249 11 98 7.5 7.0 7.2 1.3 121 chr2L 9362128 intergenic not near genes chr2L 9362188 intergenic not near genes chr2L 9362249 intergenic not near genes chr2L_11_9360001 chr2L_9360001 RAL-321 290 chr2L 9364281 9364331 chr2L 9364400 9364443 5 116 0.0 4.0 2.0 1.7 162 chr2L 9364281 intergenic CR43404 + chr2L 9364362 intron CR43404 + chr2L 9364443 intron CR43404 + chr2L_5_9360001 chr2L_9360001 RAL-321 291 chr2L 9380226 9380244 chr2L 9380341 9380359 8 115 6.5 5.5 6.0 1.1 133 chr2L 9380226 exon Shawl - chr2L 9380292 intron Shawl - chr2L 9380359 intron Shawl - chr2L_8_9380001 chr2L_9380001 RAL-321 292 chr2L 9387230 9387273 chr2L 9387348 9387391 13 117 7.0 1.5 4.2 2.5 161 chr2L 9387230 intron Shawl - chr2L 9387310 intron Shawl - chr2L 9387391 intron,5` UTR Shawl -,Aldh + chr2L_13_9385001 chr2L_9385001 RAL-321 293 chr2L 9393486 9393511 chr2L 9396468 9396498 jockey 7 2986 9.0 6.5 7.8 0.8 3012 chr2L 9393486 intron Shawl - chr2L 9394992 intron Shawl - chr2L 9396498 intron Shawl - chr2L_7_9390001 chr2L_9390001 RAL-321 294 chr2L 9393513 9393531 chr2L 9396464 9396518 jockey 6 2981 4.5 6.0 5.2 1.0 3005 chr2L 9393513 intron Shawl - chr2L 9395016 intron Shawl - chr2L 9396518 intron Shawl - chr2L_6_9395001 chr2L_9395001 RAL-321 295 chr2L 9417704 9417722 chr2L 9418039 9418057 8 335 8.0 13.5 10.8 0.7 353 chr2L 9417704 intron Mco1 + chr2L 9417880 intron Mco1 + chr2L 9418057 intron Mco1 + chr2L_8_9415001 chr2L_9415001 RAL-321 296 chr2L 9417727 9417735 chr2L 9418031 9418070 6 329 6.0 11.0 8.5 0.6 343 chr2L 9417727 intron Mco1 + chr2L 9417898 intron Mco1 + chr2L 9418070 intron Mco1 + chr2L_6_9415001 chr2L_9415001 RAL-321 297 chr2L 9454956 9455005 chr2L 9455078 9455127 24 119 7.0 4.0 5.5 3.7 171 chr2L 9454956 intron numb + chr2L 9455042 intron numb + chr2L 9455127 intron numb + chr2L_24_9455001 chr2L_9455001 RAL-321 298 chr2L 9460735 9460785 chr2L 9460841 9460900 12 108 3.5 0.0 1.8 4.3 165 chr2L 9460735 exon numb + chr2L 9460818 intron numb + chr2L 9460900 intron numb + chr2L_12_9460001 chr2L_9460001 RAL-321 299 chr2L 9474761 9474805 chr2L 9474875 9474919 21 114 4.0 6.0 5.0 3.5 158 chr2L 9474761 intergenic not near genes chr2L 9474840 intergenic not near genes chr2L 9474919 intergenic not near genes chr2L_21_9470001 chr2L_9470001 RAL-321 300 chr2L 9488554 9488578 chr2L 9488655 9488679 11 100 9.0 8.0 8.5 1.2 125 chr2L 9488554 intergenic not near genes chr2L 9488616 intergenic not near genes chr2L 9488679 intergenic not near genes chr2L_11_9485001 chr2L_9485001 RAL-321 301 chr2L 9490500 9490552 chr2L 9490600 9490652 22 96 6.0 5.0 5.5 3.4 152 chr2L 9490500 intergenic not near genes chr2L 9490576 intergenic not near genes chr2L 9490652 intergenic not near genes chr2L_22_9490001 chr2L_9490001 RAL-321 302 chr2L 9493228 9493275 chr2L 9493331 9493367 22 99 4.0 3.5 3.8 4.6 139 chr2L 9493228 intron Gdi - chr2L 9493298 intron Gdi - chr2L 9493367 intron Gdi - chr2L_22_9490001 chr2L_9490001 RAL-321 303 chr2L 9506409 9506458 chr2L 9506579 9506628 24 169 2.5 2.5 2.5 6.9 219 chr2L 9506409 intron CG33298 + chr2L 9506518 intron CG33298 + chr2L 9506628 intron CG33298 + chr2L_24_9505001 chr2L_9505001 RAL-321 304 chr2L 9543753 9543789 chr2L 9543850 9543887 12 95 0.0 4.5 2.2 3.8 134 chr2L 9543753 intergenic Cpr30B +,CG13113 + chr2L 9543820 intergenic Cpr30B +,CG13113 + chr2L 9543887 intergenic Cpr30B +,CG13113 + chr2L_12_9540001 chr2L_9540001 RAL-321 305 chr2L 9556879 9556923 chr2L 9556989 9557006 7 99 2.0 10.0 6.0 1.0 127 chr2L 9556879 intron jp - chr2L 9556942 intron jp - chr2L 9557006 intron jp - chr2L_7_9555001 chr2L_9555001 RAL-321 306 chr2L 9719764 9719785 chr2L 9719866 9719887 9 102 0.0 8.5 4.2 1.7 123 chr2L 9719764 intron Nckx30C - chr2L 9719826 intron Nckx30C - chr2L 9719887 intron Nckx30C - chr2L_9_9715001 chr2L_9715001 RAL-321 307 chr2L 9730955 9731004 chr2L 9731058 9731107 22 102 4.5 4.5 4.5 4.0 152 chr2L 9730955 intron Nckx30C - chr2L 9731031 intron Nckx30C - chr2L 9731107 intron Nckx30C - chr2L_22_9730001 chr2L_9730001 RAL-321 308 chr2L 9837424 9837445 chr2L 9837522 9837543 10 98 2.0 3.5 2.8 2.6 119 chr2L 9837424 intron nAChRalpha6 - chr2L 9837484 intron nAChRalpha6 - chr2L 9837543 intron nAChRalpha6 - chr2L_10_9835001 chr2L_9835001 RAL-321 309 chr2L 9871505 9871532 chr2L 9871609 9871634 9 101 4.0 4.0 4.0 1.8 129 chr2L 9871505 intron nAChRalpha6 - chr2L 9871570 intron nAChRalpha6 - chr2L 9871634 intron nAChRalpha6 - chr2L_9_9870001 chr2L_9870001 RAL-321 310 chr2L 9973710 9973758 chr2L 9980849 9980897 HMS-Beagle 19 7134 7.5 5.5 6.5 2.5 7187 chr2L 9973710 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980897 intergenic not near genes chr2L_19_9975001 chr2L_9975001 RAL-321 311 chr2L 9986329 9986380 chr2L 9986444 9986494 20 105 6.0 7.5 6.8 2.6 165 chr2L 9986329 intron bib + chr2L 9986412 intron bib + chr2L 9986494 intron bib + chr2L_20_9985001 chr2L_9985001 RAL-321 312 chr2L 10051704 10051753 chr2L 10051809 10051838 17 95 3.0 6.5 4.8 2.9 134 chr2L 10051704 5` UTR CR44874 + chr2L 10051771 5` UTR CR44874 + chr2L 10051838 5` UTR CR44874 + chr2L_17_10050001 chr2L_10050001 RAL-321 313 chr2L 10058750 10058768 chr2L 10058846 10058864 9 94 7.0 5.0 6.0 1.3 114 chr2L 10058750 exon Pen + chr2L 10058807 intron Pen + chr2L 10058864 exon Pen + chr2L_9_10055001 chr2L_10055001 RAL-321 314 chr2L 10078107 10078120 chr2L 10078285 10078298 7 176 16.0 4.0 10.0 0.6 191 chr2L 10078107 intron CG44153 - chr2L 10078202 intron CG44153 - chr2L 10078298 intron CG44153 - chr2L_7_10075001 chr2L_10075001 RAL-321 315 chr2L 10078127 10078159 chr2L 10078283 10078337 12 174 9.0 4.0 6.5 1.6 210 chr2L 10078127 intron CG44153 - chr2L 10078232 intron CG44153 - chr2L 10078337 intron CG44153 - chr2L_12_10075001 chr2L_10075001 RAL-321 316 chr2L 10083034 10083082 chr2L 10083144 10083194 9 112 7.0 5.0 6.0 1.3 160 chr2L 10083034 intron CG44153 - chr2L 10083114 intron CG44153 - chr2L 10083194 intron CG44153 - chr2L_9_10080001 chr2L_10080001 RAL-321 317 chr2L 10138171 10138183 chr2L 10143437 10143449 Rt1c 7 5265 6.0 7.5 6.8 0.9 5278 chr2L 10138171 intron CG44153 - chr2L 10140810 intron CG44153 - chr2L 10143449 intron CG44153 - chr2L_7_10140001 chr2L_10140001 RAL-321 318 chr2L 10156302 10156353 chr2L 10163792 10163836 blood 20 7484 9.5 5.5 7.5 2.4 7534 chr2L 10156302 intron,3` UTR CG44153 -,CG4839 + chr2L 10160069 intron CG44153 - chr2L 10163836 intron CG44153 - chr2L_20_10160001 chr2L_10160001 RAL-321 319 chr2L 10191438 10191486 chr2L 10191541 10191589 12 103 7.5 3.5 5.5 1.8 151 chr2L 10191438 intron,5` UTR Sur -,CG31874 - chr2L 10191514 intron Sur - chr2L 10191589 intron Sur - chr2L_12_10190001 chr2L_10190001 RAL-321 320 chr2L 10209827 10209850 chr2L 10209924 10209947 15 97 5.5 0.0 2.8 3.9 120 chr2L 10209827 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209887 3` UTR CG5727 - chr2L 10209947 3` UTR CG5727 - chr2L_15_10205001 chr2L_10205001 RAL-321 321 chr2L 10281655 10281685 chr2L 10281770 10281811 5 119 0.0 4.0 2.0 1.7 156 chr2L 10281655 intergenic CG5604 - chr2L 10281733 intergenic CG5604 - chr2L 10281811 intergenic CG5604 - chr2L_5_10280001 chr2L_10280001 RAL-321 322 chr2L 10294157 10294195 chr2L 10294253 10294291 13 94 2.5 5.0 3.8 2.7 134 chr2L 10294157 intron Hand - chr2L 10294224 intron Hand - chr2L 10294291 intron Hand - chr2L_13_10290001 chr2L_10290001 RAL-321 323 chr2L 10294657 10294688 chr2L 10294763 10294794 14 105 7.5 6.5 7.0 1.8 137 chr2L 10294657 intron Hand - chr2L 10294726 intron Hand - chr2L 10294794 intron Hand - chr2L_14_10290001 chr2L_10290001 RAL-321 324 chr2L 10458193 10458214 chr2L 10458309 10458330 10 114 0.0 5.5 2.8 2.6 137 chr2L 10458193 intron LM408 + chr2L 10458262 intron LM408 + chr2L 10458330 intron LM408 + chr2L_10_10455001 chr2L_10455001 RAL-321 325 chr2L 10474367 10474393 chr2L 10474468 10474494 12 99 11.5 2.5 7.0 1.5 127 chr2L 10474367 intergenic RluA-1 - chr2L 10474430 intergenic RluA-1 - chr2L 10474494 intergenic RluA-1 - chr2L_12_10470001 chr2L_10470001 RAL-321 326 chr2L 10480293 10480336 chr2L 10480391 10480452 23 98 0.5 0.0 0.2 19.2 159 chr2L 10480293 intron RluA-2 + chr2L 10480372 intron RluA-2 + chr2L 10480452 intron RluA-2 + chr2L_23_10480001 chr2L_10480001 RAL-321 327 chr2L 10490255 10490300 chr2L 10490357 10490401 21 101 13.0 7.0 10.0 1.9 146 chr2L 10490255 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490328 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490401 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_21_10490001 chr2L_10490001 RAL-321 328 chr2L 10515339 10515390 chr2L 10515452 10515503 30 113 6.0 3.0 4.5 5.5 164 chr2L 10515339 intron,intron CG45083 -,Fatp - chr2L 10515421 intron,intron CG45083 -,Fatp - chr2L 10515503 intron,intron CG45083 -,Fatp - chr2L_30_10515001 chr2L_10515001 RAL-321 329 chr2L 10531590 10531626 chr2L 10531702 10531738 20 112 0.5 3.5 2.0 6.7 148 chr2L 10531590 3` UTR Lip4 + chr2L 10531664 3` UTR Lip4 + chr2L 10531738 3` UTR Lip4 + chr2L_20_10530001 chr2L_10530001 RAL-321 330 chr2L 10544428 10544443 chr2L 10544524 10544539 5 95 0.0 5.5 2.8 1.3 111 chr2L 10544428 intergenic Trim9 + chr2L 10544484 intergenic Trim9 + chr2L 10544539 intergenic Trim9 + chr2L_5_10540001 chr2L_10540001 RAL-321 331 chr2L 10580668 10580713 chr2L 10580764 10580794 20 93 8.0 7.5 7.8 2.3 126 chr2L 10580668 intron Trim9 + chr2L 10580731 intron Trim9 + chr2L 10580794 intron Trim9 + chr2L_20_10580001 chr2L_10580001 RAL-321 332 chr2L 10580714 10580717 chr2L 10580762 10580775 4 58 8.0 8.0 8.0 0.4 61 chr2L 10580714 intron Trim9 + chr2L 10580744 intron Trim9 + chr2L 10580775 intron Trim9 + chr2L_4_10580001 chr2L_10580001 RAL-321 333 chr2L 10592823 10592872 chr2L 10600504 10600554 opus 12 7682 1.5 2.5 2.0 4.0 7731 chr2L 10592823 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600554 intron Trim9 + chr2L_12_10595001 chr2L_10595001 RAL-321 334 chr2L 10631190 10631220 chr2L 10631342 10631372 17 152 8.0 0.0 4.0 3.4 182 chr2L 10631190 intron CG7329 - chr2L 10631281 intron CG7329 - chr2L 10631372 intron CG7329 - chr2L_17_10630001 chr2L_10630001 RAL-321 335 chr2L 10633341 10633356 chr2L 10633448 10633453 4 104 8.5 8.5 8.5 0.4 112 chr2L 10633341 intron CG7329 - chr2L 10633397 intron CG7329 - chr2L 10633453 intron CG7329 - chr2L_4_10630001 chr2L_10630001 RAL-321 336 chr2L 10633372 10633385 chr2L 10633443 10633464 8 84 4.0 7.5 5.8 1.2 92 chr2L 10633372 intron CG7329 - chr2L 10633418 intron CG7329 - chr2L 10633464 intron CG7329 - chr2L_8_10630001 chr2L_10630001 RAL-321 337 chr2L 10634734 10634788 chr2L 10634834 10634888 18 100 2.5 3.5 3.0 4.5 154 chr2L 10634734 intron CG7329 - chr2L 10634811 intron CG7329 - chr2L 10634888 intron CG7329 - chr2L_18_10630001 chr2L_10630001 RAL-321 338 chr2L 10638032 10638039 chr2L 10638135 10638141 4 103 3.0 0.0 1.5 1.6 109 chr2L 10638032 intron CG7329 - chr2L 10638086 intron CG7329 - chr2L 10638141 intron CG7329 - chr2L_4_10635001 chr2L_10635001 RAL-321 339 chr2L 10640620 10640635 chr2L 10640729 10640744 11 108 12.0 5.0 8.5 1.2 124 chr2L 10640620 exon CG31872 + chr2L 10640682 exon CG31872 + chr2L 10640744 exon CG31872 + chr2L_11_10640001 chr2L_10640001 RAL-321 340 chr2L 10640636 10640672 chr2L 10640728 10640781 18 107 4.0 4.5 4.2 3.5 145 chr2L 10640636 exon CG31872 + chr2L 10640708 exon CG31872 + chr2L 10640781 exon CG31872 + chr2L_18_10640001 chr2L_10640001 RAL-321 341 chr2L 10656572 10656609 chr2L 10656668 10656705 15 96 4.0 5.0 4.5 2.7 133 chr2L 10656572 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656705 intergenic not near genes chr2L_15_10655001 chr2L_10655001 RAL-321 342 chr2L 10679018 10679034 chr2L 10679127 10679143 5 109 9.0 5.0 7.0 0.6 125 chr2L 10679018 exon CG17104 + chr2L 10679080 exon CG17104 + chr2L 10679143 exon CG17104 + chr2L_5_10675001 chr2L_10675001 RAL-321 343 chr2L 10688526 10688574 chr2L 10688622 10688670 23 96 4.0 5.5 4.8 4.0 144 chr2L 10688526 intergenic CG7294 - chr2L 10688598 intergenic CG7294 - chr2L 10688670 intergenic CG7294 - chr2L_23_10685001 chr2L_10685001 RAL-321 344 chr2L 10704916 10704946 chr2L 10705016 10705061 6 110 6.0 3.5 4.8 1.0 145 chr2L 10704916 intron,3` UTR Lip2 -,CG6415 + chr2L 10704988 intron Lip2 - chr2L 10705061 exon Lip2 - chr2L_6_10700001 chr2L_10700001 RAL-321 345 chr2L 10705454 10705475 chr2L 10705531 10705578 11 92 3.0 3.0 3.0 2.8 124 chr2L 10705454 exon Lip2 - chr2L 10705516 intron Lip2 - chr2L 10705578 intron Lip2 - chr2L_11_10705001 chr2L_10705001 RAL-321 346 chr2L 10721188 10721242 chr2L 10721301 10721341 22 112 4.0 4.0 4.0 4.4 153 chr2L 10721188 intergenic not near genes chr2L 10721264 intergenic not near genes chr2L 10721341 intergenic not near genes chr2L_22_10720001 chr2L_10720001 RAL-321 347 chr2L 10727263 10727290 chr2L 10727392 10727421 11 130 5.5 0.0 2.8 2.9 158 chr2L 10727263 intron CG6431 + chr2L 10727342 intron CG6431 + chr2L 10727421 intron CG6431 + chr2L_11_10725001 chr2L_10725001 RAL-321 348 chr2L 10754061 10754080 chr2L 10754167 10754184 8 105 10.0 15.5 12.8 0.6 123 chr2L 10754061 intron CG17124 - chr2L 10754122 intron CG17124 - chr2L 10754184 intron CG17124 - chr2L_8_10750001 chr2L_10750001 RAL-321 349 chr2L 10755547 10755599 chr2L 10755676 10755728 27 129 4.5 8.0 6.2 3.8 181 chr2L 10755547 intron CG17124 - chr2L 10755638 intron CG17124 - chr2L 10755728 intron CG17124 - chr2L_27_10755001 chr2L_10755001 RAL-321 350 chr2L 10787997 10788028 chr2L 10788093 10788124 4 96 1.0 9.0 5.0 0.7 127 chr2L 10787997 intron CG31869 - chr2L 10788060 intron CG31869 - chr2L 10788124 intron CG31869 - chr2L_4_10785001 chr2L_10785001 RAL-321 351 chr2L 10836740 10836779 chr2L 10836839 10836877 13 98 6.5 2.5 4.5 2.4 137 chr2L 10836740 intron Nos - chr2L 10836808 intron Nos - chr2L 10836877 intron Nos - chr2L_13_10835001 chr2L_10835001 RAL-321 352 chr2L 10852150 10852179 chr2L 10852259 10852287 14 109 11.5 12.5 12.0 1.1 137 chr2L 10852150 intron CG43129 + chr2L 10852218 intron CG43129 + chr2L 10852287 intron CG43129 + chr2L_14_10850001 chr2L_10850001 RAL-321 353 chr2L 10862830 10862841 chr2L 10864464 10864474 Rt1c 4 1632 13.5 12.0 12.8 0.3 1644 chr2L 10862830 3` UTR CR43807 - chr2L 10863652 intron CR43807 - chr2L 10864474 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-321 354 chr2L 10862842 10862853 chr2L 10864462 10864487 Rt1c 8 1630 9.5 11.5 10.5 0.7 1645 chr2L 10862842 3` UTR CR43807 - chr2L 10863664 intron CR43807 - chr2L 10864487 3` UTR CR43807 - chr2L_8_10860001 chr2L_10860001 RAL-321 355 chr2L 10862855 10862876 chr2L 10864458 10864473 Rt1c 7 1612 4.5 10.5 7.5 0.8 1618 chr2L 10862855 3` UTR CR43807 - chr2L 10863664 intron CR43807 - chr2L 10864473 3` UTR CR43807 - chr2L_7_10860001 chr2L_10860001 RAL-321 356 chr2L 10876345 10876365 chr2L 10876451 10876473 6 106 12.0 4.0 8.0 0.7 128 chr2L 10876345 intergenic not near genes chr2L 10876409 intergenic not near genes chr2L 10876473 intergenic not near genes chr2L_6_10875001 chr2L_10875001 RAL-321 357 chr2L 10876374 10876393 chr2L 10876447 10876494 8 81 5.0 4.0 4.5 1.5 120 chr2L 10876374 intergenic not near genes chr2L 10876434 intergenic not near genes chr2L 10876494 intergenic not near genes chr2L_8_10875001 chr2L_10875001 RAL-321 358 chr2L 10876555 10876575 chr2L 10883633 10883653 297 6 7078 6.5 1.0 3.8 1.2 7098 chr2L 10876555 intergenic not near genes chr2L 10880104 intergenic not near genes chr2L 10883653 intergenic not near genes chr2L_6_10880001 chr2L_10880001 RAL-321 359 chr2L 10891472 10891497 chr2L 10891606 10891631 15 131 13.5 9.0 11.2 1.2 159 chr2L 10891472 intergenic not near genes chr2L 10891552 intergenic not near genes chr2L 10891631 intergenic not near genes chr2L_15_10890001 chr2L_10890001 RAL-321 360 chr2L 10891498 10891512 chr2L 10891602 10891641 7 125 10.5 8.0 9.2 0.7 143 chr2L 10891498 intergenic not near genes chr2L 10891570 intergenic not near genes chr2L 10891641 intergenic not near genes chr2L_7_10890001 chr2L_10890001 RAL-321 361 chr2L 10912974 10913001 chr2L 10913073 10913100 9 99 9.0 2.5 5.8 1.3 126 chr2L 10912974 intergenic not near genes chr2L 10913037 intergenic not near genes chr2L 10913100 intergenic not near genes chr2L_9_10910001 chr2L_10910001 RAL-321 362 chr2L 10914782 10914833 chr2L 10914893 10914944 31 107 6.5 8.0 7.2 3.8 162 chr2L 10914782 intergenic not near genes chr2L 10914863 intergenic not near genes chr2L 10914944 intergenic not near genes chr2L_31_10910001 chr2L_10910001 RAL-321 363 chr2L 10946939 10946950 chr2L 10956170 10956185 roo 6 9233 2.5 11.0 6.8 0.8 9246 chr2L 10946939 intron dpr2 - chr2L 10951562 intron dpr2 - chr2L 10956185 intron dpr2 - chr2L_6_10950001 chr2L_10950001 RAL-321 364 chr2L 10946952 10946975 chr2L 10956169 10956200 roo 8 9231 2.5 11.0 6.8 1.0 9248 chr2L 10946952 intron dpr2 - chr2L 10951576 intron dpr2 - chr2L 10956200 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-321 365 chr2L 11144546 11144592 chr2L 11144703 11144749 15 157 5.0 5.5 5.2 2.4 203 chr2L 11144546 intron Gyc32E - chr2L 11144648 intron,3` UTR Gyc32E -,CG31867 - chr2L 11144749 intron,exon Gyc32E -,CG31867 - chr2L_15_11140001 chr2L_11140001 RAL-321 366 chr2L 11146479 11146488 chr2L 11146577 11146586 4 98 7.5 0.0 3.8 0.8 107 chr2L 11146479 intron Gyc32E - chr2L 11146532 intron Gyc32E - chr2L 11146586 intron Gyc32E - chr2L_4_11145001 chr2L_11145001 RAL-321 367 chr2L 11246740 11246777 chr2L 11246859 11246896 20 119 10.5 0.0 5.2 3.2 156 chr2L 11246740 intron ab + chr2L 11246818 intron ab + chr2L 11246896 intron ab + chr2L_20_11245001 chr2L_11245001 RAL-321 368 chr2L 11292365 11292406 chr2L 11292465 11292508 14 101 3.5 6.5 5.0 2.3 143 chr2L 11292365 intergenic not near genes chr2L 11292436 intergenic not near genes chr2L 11292508 intergenic not near genes chr2L_14_11290001 chr2L_11290001 RAL-321 369 chr2L 11315251 11315269 chr2L 11317675 11317693 G2 5 2419 7.0 6.5 6.8 0.6 2442 chr2L 11315251 intergenic not near genes chr2L 11316472 intergenic not near genes chr2L 11317693 intergenic not near genes chr2L_5_11315001 chr2L_11315001 RAL-321 370 chr2L 11339715 11339743 chr2L 11339812 11339840 9 93 6.5 4.5 5.5 1.4 125 chr2L 11339715 intergenic not near genes chr2L 11339778 intergenic not near genes chr2L 11339840 intergenic not near genes chr2L_9_11335001 chr2L_11335001 RAL-321 371 chr2L 11381870 11381882 chr2L 11382239 11382251 4 369 5.5 5.0 5.2 0.6 381 chr2L 11381870 intergenic not near genes chr2L 11382060 intergenic not near genes chr2L 11382251 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-321 372 chr2L 11399512 11399531 chr2L 11399609 11399628 10 97 4.5 0.0 2.2 3.1 116 chr2L 11399512 intergenic not near genes chr2L 11399570 intergenic not near genes chr2L 11399628 intergenic not near genes chr2L_10_11395001 chr2L_11395001 RAL-321 373 chr2L 11404766 11404798 chr2L 11404861 11404894 19 96 5.0 4.0 4.5 3.5 128 chr2L 11404766 intergenic not near genes chr2L 11404830 intergenic not near genes chr2L 11404894 intergenic not near genes chr2L_19_11400001 chr2L_11400001 RAL-321 374 chr2L 11411357 11411379 chr2L 13001344 13001344 5 1589983 5.0 31.0 18.0 0.3 1589987 chr2L 11411357 intergenic not near genes chr2L 12206350 intron aret + chr2L 13001344 3` UTR Vha68-1 - chr2L_5_12205001 chr2L_12205001 RAL-321 375 chr2L 11458927 11458971 chr2L 11459063 11459107 23 136 6.5 5.5 6.0 3.3 180 chr2L 11458927 intergenic not near genes chr2L 11459017 intergenic not near genes chr2L 11459107 intergenic not near genes chr2L_23_11455001 chr2L_11455001 RAL-321 376 chr2L 11491117 11491150 chr2L 11491218 11491234 7 96 7.0 3.0 5.0 1.2 117 chr2L 11491117 intergenic not near genes chr2L 11491176 intergenic not near genes chr2L 11491234 intergenic not near genes chr2L_7_11490001 chr2L_11490001 RAL-321 377 chr2L 11537178 11537209 chr2L 11537270 11537277 4 87 2.5 10.0 6.2 0.6 99 chr2L 11537178 intergenic CG43438 + chr2L 11537228 intergenic CG43438 + chr2L 11537277 intergenic CG43438 + chr2L_4_11535001 chr2L_11535001 RAL-321 378 chr2L 11540586 11540606 chr2L 11548004 11548028 Tabor 7 7421 5.5 6.5 6.0 1.0 7442 chr2L 11540586 intergenic not near genes chr2L 11544307 intergenic not near genes chr2L 11548028 intergenic not near genes chr2L_7_11540001 chr2L_11540001 RAL-321 379 chr2L 11563631 11563669 chr2L 11568855 11568893 copia 10 5223 6.5 7.5 7.0 1.2 5262 chr2L 11563631 intergenic not near genes chr2L 11566262 intergenic not near genes chr2L 11568893 intergenic not near genes chr2L_10_11565001 chr2L_11565001 RAL-321 380 chr2L 11614031 11614084 chr2L 11615546 11615599 hopper2 4 1505 4.0 4.5 4.2 0.8 1568 chr2L 11614031 intron kek2 + chr2L 11614815 intron kek2 + chr2L 11615599 intron kek2 + chr2L_4_11610001 chr2L_11610001 RAL-321 381 chr2L 11618532 11618579 chr2L 11618643 11618690 22 109 4.5 8.0 6.2 3.1 158 chr2L 11618532 intron kek2 + chr2L 11618611 intron kek2 + chr2L 11618690 intron kek2 + chr2L_22_11615001 chr2L_11615001 RAL-321 382 chr2L 11633157 11633198 chr2L 11633279 11633315 11 116 5.0 5.5 5.2 1.8 158 chr2L 11633157 intergenic not near genes chr2L 11633236 intergenic not near genes chr2L 11633315 intergenic not near genes chr2L_11_11630001 chr2L_11630001 RAL-321 383 chr2L 11672117 11672167 chr2L 11672244 11672294 17 127 3.0 4.5 3.8 3.5 177 chr2L 11672117 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672294 intergenic not near genes chr2L_17_11670001 chr2L_11670001 RAL-321 384 chr2L 11676308 11676324 chr2L 11676416 11676432 8 108 0.5 0.0 0.2 6.7 124 chr2L 11676308 intergenic not near genes chr2L 11676370 intergenic not near genes chr2L 11676432 intergenic not near genes chr2L_8_11675001 chr2L_11675001 RAL-321 385 chr2L 11682948 11682995 chr2L 11683137 11683179 12 187 3.0 4.0 3.5 2.7 231 chr2L 11682948 intergenic not near genes chr2L 11683064 intergenic not near genes chr2L 11683179 intergenic not near genes chr2L_12_11680001 chr2L_11680001 RAL-321 386 chr2L 11713492 11713502 chr2L 11720980 11720990 blood 8 7488 15.5 8.0 11.8 0.6 7498 chr2L 11713492 intergenic not near genes chr2L 11717241 intergenic not near genes chr2L 11720990 intergenic CR44143 + chr2L_8_11715001 chr2L_11715001 RAL-321 387 chr2L 11713504 11713537 chr2L 11720974 11721025 blood 17 7482 6.0 7.0 6.5 2.3 7521 chr2L 11713504 intergenic not near genes chr2L 11717264 intergenic not near genes chr2L 11721025 intergenic CR44143 + chr2L_17_11715001 chr2L_11715001 RAL-321 388 chr2L 11750306 11750339 chr2L 11750612 11750645 17 305 3.0 5.5 4.2 3.3 339 chr2L 11750306 intergenic not near genes chr2L 11750476 intergenic not near genes chr2L 11750645 intergenic not near genes chr2L_17_11750001 chr2L_11750001 RAL-321 389 chr2L 11770580 11770631 chr2L 11770685 11770738 12 105 6.0 5.0 5.5 1.8 158 chr2L 11770580 intergenic not near genes chr2L 11770659 intergenic not near genes chr2L 11770738 intergenic not near genes chr2L_12_11770001 chr2L_11770001 RAL-321 390 chr2L 11781015 11781194 chr2L 11781119 11781290 6 100 0.5 0.0 0.2 5.0 275 chr2L 11781015 intergenic not near genes chr2L 11781152 intergenic not near genes chr2L 11781290 intergenic not near genes chr2L_6_11780001 chr2L_11780001 RAL-321 391 chr2L 11820407 11820464 chr2L 11820512 11820565 22 101 5.0 10.5 7.8 2.5 158 chr2L 11820407 intron Pde1c - chr2L 11820486 intron Pde1c - chr2L 11820565 intron Pde1c - chr2L_22_11820001 chr2L_11820001 RAL-321 392 chr2L 11825692 11825702 chr2L 11825791 11825791 5 97 8.5 0.0 4.2 1.0 99 chr2L 11825692 intron Pde1c - chr2L 11825742 intron Pde1c - chr2L 11825791 intron Pde1c - chr2L_5_11825001 chr2L_11825001 RAL-321 393 chr2L 11841326 11841370 chr2L 11841443 11841497 10 116 7.5 0.0 3.8 2.1 171 chr2L 11841326 intron Pde1c - chr2L 11841412 intron Pde1c - chr2L 11841497 intron Pde1c - chr2L_10_11840001 chr2L_11840001 RAL-321 394 chr2L 11892524 11892551 chr2L 11892633 11892660 14 108 3.5 3.5 3.5 3.1 136 chr2L 11892524 intron Pde1c - chr2L 11892592 intron Pde1c - chr2L 11892660 intron Pde1c - chr2L_14_11890001 chr2L_11890001 RAL-321 395 chr2L 12031376 12031419 chr2L 12031477 12031520 19 101 6.5 7.0 6.8 2.4 144 chr2L 12031376 intron dmGlut + chr2L 12031448 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_19_12030001 chr2L_12030001 RAL-321 396 chr2L 12067313 12067355 chr2L 12074381 12074427 297 24 7071 8.5 5.0 6.8 3.1 7114 chr2L 12067313 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074427 intergenic not near genes chr2L_24_12070001 chr2L_12070001 RAL-321 397 chr2L 12196904 12196919 chr2L 12197074 12197083 5 166 4.0 0.0 2.0 1.7 179 chr2L 12196904 intron aret + chr2L 12196994 intron aret + chr2L 12197083 intron aret + chr2L_5_12195001 chr2L_12195001 RAL-321 398 chr2L 12229185 12229231 chr2L 12229291 12229337 17 103 5.0 5.0 5.0 2.8 152 chr2L 12229185 intron aret + chr2L 12229261 intron aret + chr2L 12229337 intron aret + chr2L_17_12225001 chr2L_12225001 RAL-321 399 chr2L 12269391 12269401 chr2L 12269489 12269499 6 98 7.0 4.5 5.8 0.9 108 chr2L 12269391 intron aret + chr2L 12269445 intron aret + chr2L 12269499 intron aret + chr2L_6_12265001 chr2L_12265001 RAL-321 400 chr2L 12305389 12305438 chr2L 12305497 12305546 22 107 5.5 4.0 4.8 3.8 157 chr2L 12305389 intron aret + chr2L 12305468 intron aret + chr2L 12305546 intron aret + chr2L_22_12305001 chr2L_12305001 RAL-321 401 chr2L 12366842 12366891 chr2L 12366948 12366997 25 106 5.0 5.0 5.0 4.2 155 chr2L 12366842 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12366997 intron bru-2 + chr2L_25_12365001 chr2L_12365001 RAL-321 402 chr2L 12371683 12371735 chr2L 12372472 12372524 15 789 4.0 6.5 5.2 2.4 841 chr2L 12371683 intron bru-2 + chr2L 12372104 intron bru-2 + chr2L 12372524 intron bru-2 + chr2L_15_12370001 chr2L_12370001 RAL-321 403 chr2L 12394972 12394996 chr2L 12395104 12395113 14 131 6.0 4.5 5.2 2.3 141 chr2L 12394972 intron bru-2 + chr2L 12395042 intron bru-2 + chr2L 12395113 intron bru-2 + chr2L_14_12395001 chr2L_12395001 RAL-321 404 chr2L 12408919 12408969 chr2L 12409030 12409080 26 109 5.0 7.0 6.0 3.7 161 chr2L 12408919 intron vir-1 - chr2L 12409000 intron vir-1 - chr2L 12409080 intron vir-1 - chr2L_26_12405001 chr2L_12405001 RAL-321 405 chr2L 12480521 12480569 chr2L 12480618 12480666 32 97 5.0 3.5 4.2 6.2 145 chr2L 12480521 intron bun - chr2L 12480594 intron bun - chr2L 12480666 intron bun - chr2L_32_12480001 chr2L_12480001 RAL-321 406 chr2L 12487877 12487889 chr2L 12487970 12487988 6 99 16.0 10.5 13.2 0.4 111 chr2L 12487877 intron bun - chr2L 12487932 intron bun - chr2L 12487988 intron bun - chr2L_6_12485001 chr2L_12485001 RAL-321 407 chr2L 12487891 12487918 chr2L 12487968 12488017 13 96 8.0 9.0 8.5 1.4 126 chr2L 12487891 intron bun - chr2L 12487954 intron bun - chr2L 12488017 intron bun - chr2L_13_12485001 chr2L_12485001 RAL-321 408 chr2L 12502163 12502214 chr2L 12502264 12502315 28 99 5.5 6.0 5.8 4.1 152 chr2L 12502163 intron bun - chr2L 12502239 intron bun - chr2L 12502315 intron bun - chr2L_28_12500001 chr2L_12500001 RAL-321 409 chr2L 12529211 12529260 chr2L 12529383 12529432 18 171 4.0 7.0 5.5 2.8 221 chr2L 12529211 intron bun - chr2L 12529322 intron bun - chr2L 12529432 intron bun - chr2L_18_12525001 chr2L_12525001 RAL-321 410 chr2L 12558298 12558353 chr2L 12565447 12565502 HMS-Beagle 24 7146 5.0 6.0 5.5 3.7 7204 chr2L 12558298 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565502 intergenic not near genes chr2L_24_12560001 chr2L_12560001 RAL-321 411 chr2L 12619884 12619904 chr2L 12619980 12620000 7 93 3.5 4.5 4.0 1.4 116 chr2L 12619884 intron,intron nub +,Ref2 - chr2L 12619942 intron,intron nub +,Ref2 - chr2L 12620000 intron,intron nub +,Ref2 - chr2L_7_12615001 chr2L_12615001 RAL-321 412 chr2L 12652921 12652973 chr2L 12653121 12653173 16 194 6.5 9.5 8.0 1.8 252 chr2L 12652921 intergenic not near genes chr2L 12653047 intergenic not near genes chr2L 12653173 intergenic not near genes chr2L_16_12650001 chr2L_12650001 RAL-321 413 chr2L 12677695 12677727 chr2L 12677801 12677833 15 105 4.5 4.0 4.2 2.9 138 chr2L 12677695 intron pdm2 + chr2L 12677764 intron pdm2 + chr2L 12677833 intron pdm2 + chr2L_15_12675001 chr2L_12675001 RAL-321 414 chr2L 12728903 12728911 chr2L 12729165 12729173 pogo 9 262 14.0 4.0 9.0 0.9 270 chr2L 12728903 intron MRP + chr2L 12729038 intron MRP + chr2L 12729173 intron MRP + chr2L_9_12725001 chr2L_12725001 RAL-321 415 chr2L 12728914 12728947 chr2L 12729161 12729189 pogo 15 258 8.0 3.5 5.8 2.2 275 chr2L 12728914 intron MRP + chr2L 12729052 intron MRP + chr2L 12729189 exon MRP + chr2L_15_12725001 chr2L_12725001 RAL-321 416 chr2L 12731038 12731086 chr2L 12735825 12735873 F-element 23 4786 7.5 7.0 7.2 2.8 4835 chr2L 12731038 intron MRP + chr2L 12733456 intron MRP + chr2L 12735873 intron MRP + chr2L_23_12730001 chr2L_12730001 RAL-321 417 chr2L 12739159 12739204 chr2L 12743960 12744005 Doc 17 4801 3.5 9.5 6.5 2.3 4846 chr2L 12739159 exon MRP + chr2L 12741582 intron MRP + chr2L 12744005 exon MRP + chr2L_17_12740001 chr2L_12740001 RAL-321 418 chr2L 12751289 12751341 chr2L 12751392 12751444 19 102 3.0 2.0 2.5 5.4 155 chr2L 12751289 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751444 intergenic not near genes chr2L_19_12750001 chr2L_12750001 RAL-321 419 chr2L 12763806 12763868 chr2L 12764038 12764088 BS 6 225 0.0 0.0 0.0 6.0 282 chr2L 12763806 intergenic not near genes chr2L 12763947 intergenic not near genes chr2L 12764088 intergenic not near genes chr2L_6_12760001 chr2L_12760001 RAL-321 420 chr2L 12781783 12781815 chr2L 12789246 12789278 Quasimodo 14 7463 11.0 9.5 10.2 1.2 7495 chr2L 12781783 intergenic not near genes chr2L 12785530 intergenic not near genes chr2L 12789278 intergenic not near genes chr2L_14_12785001 chr2L_12785001 RAL-321 421 chr2L 12791587 12791612 chr2L 12795282 12795307 F-element 8 3692 12.5 10.5 11.5 0.6 3720 chr2L 12791587 intergenic not near genes chr2L 12793447 intergenic not near genes chr2L 12795307 intergenic not near genes chr2L_8_12790001 chr2L_12790001 RAL-321 422 chr2L 12791613 12791630 chr2L 12795277 12795325 F-element 12 3689 7.0 8.5 7.8 1.4 3712 chr2L 12791613 intergenic not near genes chr2L 12793469 intergenic not near genes chr2L 12795325 intergenic not near genes chr2L_12_12790001 chr2L_12790001 RAL-321 423 chr2L 12807419 12807455 chr2L 12807521 12807557 15 102 7.5 4.0 5.8 2.2 138 chr2L 12807419 intergenic CR43818 - chr2L 12807488 intergenic CR43818 - chr2L 12807557 intergenic CR43818 - chr2L_15_12805001 chr2L_12805001 RAL-321 424 chr2L 12835535 12835584 chr2L 12835664 12835713 18 129 5.0 4.0 4.5 3.3 178 chr2L 12835535 intergenic not near genes chr2L 12835624 intergenic not near genes chr2L 12835713 intergenic not near genes chr2L_18_12835001 chr2L_12835001 RAL-321 425 chr2L 12848410 12848466 chr2L 12848520 12848574 16 109 3.0 3.0 3.0 4.0 164 chr2L 12848410 intergenic not near genes chr2L 12848492 intergenic not near genes chr2L 12848574 intergenic not near genes chr2L_16_12845001 chr2L_12845001 RAL-321 426 chr2L 12861676 12861726 chr2L 12863163 12863213 hobo 15 1486 6.5 7.0 6.8 1.9 1537 chr2L 12861676 intergenic not near genes chr2L 12862444 intergenic not near genes chr2L 12863213 intergenic not near genes chr2L_15_12860001 chr2L_12860001 RAL-321 427 chr2L 12894006 12894020 chr2L 12895493 12895507 hobo 4 1487 16.5 10.0 13.2 0.3 1501 chr2L 12894006 intergenic not near genes chr2L 12894756 intergenic not near genes chr2L 12895507 intergenic not near genes chr2L_4_12890001 chr2L_12890001 RAL-321 428 chr2L 12894025 12894051 chr2L 12895489 12895538 hobo 9 1475 8.5 9.5 9.0 0.9 1513 chr2L 12894025 intergenic not near genes chr2L 12894782 intergenic not near genes chr2L 12895538 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-321 429 chr2L 12905455 12905507 chr2L 12905559 12905561 22 102 6.0 4.0 5.0 3.7 106 chr2L 12905455 intergenic not near genes chr2L 12905508 intergenic not near genes chr2L 12905561 intergenic not near genes chr2L_22_12905001 chr2L_12905001 RAL-321 430 chr2L 12933835 12933881 chr2L 12941321 12941368 blood 24 7485 5.0 6.0 5.5 3.7 7533 chr2L 12933835 intergenic not near genes chr2L 12937602 intergenic not near genes chr2L 12941368 intergenic not near genes chr2L_24_12935001 chr2L_12935001 RAL-321 431 chr2L 12945959 12946004 chr2L 12946059 12946098 12 95 4.0 5.0 4.5 2.2 139 chr2L 12945959 intergenic not near genes chr2L 12946028 intergenic not near genes chr2L 12946098 intergenic not near genes chr2L_12_12945001 chr2L_12945001 RAL-321 432 chr2L 13020834 13020878 chr2L 13022635 13022678 18 1803 31.5 44.5 38.0 0.5 1844 chr2L 13020834 exon A16 - chr2L 13021756 intergenic CG9932 -,A16 - chr2L 13022678 3` UTR CG9932 - chr2L_18_13020001 chr2L_13020001 RAL-321 433 chr2L 13147923 13147960 chr2L 13148024 13148061 22 100 13.0 4.5 8.8 2.2 138 chr2L 13147923 intergenic not near genes chr2L 13147992 intergenic not near genes chr2L 13148061 intergenic not near genes chr2L_22_13145001 chr2L_13145001 RAL-321 434 chr2L 13152211 13152253 chr2L 13152309 13152342 12 96 8.0 4.5 6.2 1.7 131 chr2L 13152211 intergenic not near genes chr2L 13152276 intergenic not near genes chr2L 13152342 intergenic not near genes chr2L_12_13150001 chr2L_13150001 RAL-321 435 chr2L 13154095 13154120 chr2L 13154193 13154218 11 98 6.5 0.5 3.5 2.4 123 chr2L 13154095 intergenic not near genes chr2L 13154156 intergenic not near genes chr2L 13154218 intergenic not near genes chr2L_11_13150001 chr2L_13150001 RAL-321 436 chr2L 13156447 13156470 chr2L 13156576 13156600 6 129 7.5 8.0 7.8 0.7 153 chr2L 13156447 intergenic not near genes chr2L 13156524 intergenic not near genes chr2L 13156600 intergenic not near genes chr2L_6_13155001 chr2L_13155001 RAL-321 437 chr2L 13185301 13185350 chr2L 13185400 13185449 26 98 6.0 7.0 6.5 3.5 148 chr2L 13185301 3` UTR CG16974 - chr2L 13185375 3` UTR CG16974 - chr2L 13185449 exon CG16974 - chr2L_26_13185001 chr2L_13185001 RAL-321 438 chr2L 13204300 13204317 chr2L 13204419 13204423 8 117 17.5 9.5 13.5 0.6 123 chr2L 13204300 intron Pect + chr2L 13204362 intron Pect + chr2L 13204423 intron Pect + chr2L_8_13200001 chr2L_13200001 RAL-321 439 chr2L 13255265 13255298 chr2L 13255428 13255461 5 161 0.0 5.5 2.8 1.3 196 chr2L 13255265 intron CG31728 + chr2L 13255363 intron CG31728 + chr2L 13255461 exon CG31728 + chr2L_5_13255001 chr2L_13255001 RAL-321 440 chr2L 13292704 13292717 chr2L 13292801 13292819 7 101 11.5 6.0 8.8 0.7 115 chr2L 13292704 intron CG31729 + chr2L 13292762 intron CG31729 + chr2L 13292819 intron CG31729 + chr2L_7_13290001 chr2L_13290001 RAL-321 441 chr2L 13292718 13292742 chr2L 13292799 13292831 14 98 7.5 5.0 6.2 1.9 113 chr2L 13292718 intron CG31729 + chr2L 13292774 intron CG31729 + chr2L 13292831 intron CG31729 + chr2L_14_13290001 chr2L_13290001 RAL-321 442 chr2L 13374310 13374355 chr2L 13374417 13374462 25 105 5.0 5.0 5.0 4.2 152 chr2L 13374310 5` UTR CG6565 + chr2L 13374386 5` UTR CG6565 + chr2L 13374462 5` UTR CG6565 + chr2L_25_13370001 chr2L_13370001 RAL-321 443 chr2L 13398697 13398751 chr2L 13398797 13398851 19 99 5.5 2.0 3.8 4.0 154 chr2L 13398697 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398851 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_19_13395001 chr2L_13395001 RAL-321 444 chr2L 13405627 13405676 chr2L 13410444 13410493 Doc 22 4816 3.5 6.5 5.0 3.7 4866 chr2L 13405627 exon CG7110 + chr2L 13408060 intron CG7110 + chr2L 13410493 intron CG7110 + chr2L_22_13405001 chr2L_13405001 RAL-321 445 chr2L 13426170 13426179 chr2L 13426271 13426273 6 103 12.0 5.0 8.5 0.6 103 chr2L 13426170 intron CG42784 + chr2L 13426222 intron CG42784 + chr2L 13426273 intron CG42784 + chr2L_6_13425001 chr2L_13425001 RAL-321 446 chr2L 13449442 13449496 chr2L 13456898 13456952 Quasimodo 22 7456 3.0 5.0 4.0 4.4 7510 chr2L 13449442 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453197 intron CG42784 + chr2L 13456952 intron CG42784 + chr2L_22_13450001 chr2L_13450001 RAL-321 447 chr2L 13460324 13460379 chr2L 13460488 13460512 18 160 1.0 5.0 3.0 4.5 188 chr2L 13460324 intron CG42784 + chr2L 13460418 intron CG42784 + chr2L 13460512 intron CG42784 + chr2L_18_13460001 chr2L_13460001 RAL-321 448 chr2L 13481438 13481469 chr2L 13482065 13482096 jockey 17 627 10.0 9.5 9.8 1.6 658 chr2L 13481438 intron CG42784 + chr2L 13481767 intron CG42784 + chr2L 13482096 intron CG42784 + chr2L_17_13480001 chr2L_13480001 RAL-321 449 chr2L 13522263 13522287 chr2L 13527589 13527613 Transpac 15 5325 7.5 10.0 8.8 1.5 5350 chr2L 13522263 intron B4 - chr2L 13524938 intron B4 - chr2L 13527613 intron B4 - chr2L_15_13520001 chr2L_13520001 RAL-321 450 chr2L 13560383 13560420 chr2L 13565224 13565261 F-element 21 4841 12.0 9.0 10.5 1.8 4878 chr2L 13560383 intron kuz + chr2L 13562822 intron kuz + chr2L 13565261 intron kuz + chr2L_21_13560001 chr2L_13560001 RAL-321 451 chr2L 13720217 13720244 chr2L 13720325 13720352 10 108 7.0 0.0 3.5 2.2 135 chr2L 13720217 intergenic not near genes chr2L 13720284 intergenic not near genes chr2L 13720352 intergenic not near genes chr2L_10_13720001 chr2L_13720001 RAL-321 452 chr2L 13761795 13761818 chr2L 13762926 13762949 Doc 7 1131 12.5 11.5 12.0 0.5 1154 chr2L 13761795 intron TM9SF4 + chr2L 13762372 intron TM9SF4 + chr2L 13762949 intron TM9SF4 + chr2L_7_13760001 chr2L_13760001 RAL-321 453 chr2L 13761822 13761839 chr2L 13762908 13762925 Doc 6 1107 6.5 6.5 6.5 0.8 1103 chr2L 13761822 intron TM9SF4 + chr2L 13762374 intron TM9SF4 + chr2L 13762925 intron TM9SF4 + chr2L_6_13760001 chr2L_13760001 RAL-321 454 chr2L 13770033 13770081 chr2L 13770150 13770196 16 114 6.5 5.0 5.8 2.4 163 chr2L 13770033 intron TM9SF4 + chr2L 13770114 intron TM9SF4 + chr2L 13770196 intron TM9SF4 + chr2L_16_13770001 chr2L_13770001 RAL-321 455 chr2L 13812569 13812594 chr2L 13812664 13812688 5 92 7.0 0.0 3.5 1.1 119 chr2L 13812569 exon CG16865 + chr2L 13812628 exon CG16865 + chr2L 13812688 3` UTR CG16865 + chr2L_5_13810001 chr2L_13810001 RAL-321 456 chr2L 13853070 13853110 chr2L 13862240 13862280 roo 18 9170 11.5 9.5 10.5 1.6 9210 chr2L 13853070 intron CenG1A + chr2L 13857675 intron CenG1A + chr2L 13862280 intron CenG1A + chr2L_18_13855001 chr2L_13855001 RAL-321 457 chr2L 13870443 13870487 chr2L 13870550 13870597 13 102 6.0 8.5 7.2 1.6 154 chr2L 13870443 intron CenG1A + chr2L 13870520 intron CenG1A + chr2L 13870597 intron CenG1A + chr2L_13_13870001 chr2L_13870001 RAL-321 458 chr2L 13881972 13882022 chr2L 13882114 13882164 31 141 4.0 3.5 3.8 6.5 192 chr2L 13881972 intron CenG1A + chr2L 13882068 intron CenG1A + chr2L 13882164 intron CenG1A + chr2L_31_13880001 chr2L_13880001 RAL-321 459 chr2L 13981510 13981550 chr2L 13981621 13981661 21 111 7.0 6.0 6.5 2.8 151 chr2L 13981510 exon NimC2 + chr2L 13981586 intron NimC2 + chr2L 13981661 intron NimC2 + chr2L_21_13980001 chr2L_13980001 RAL-321 460 chr2L 13988260 13988303 chr2L 13988367 13988410 24 106 5.5 4.5 5.0 4.0 150 chr2L 13988260 intron rk - chr2L 13988335 intron rk - chr2L 13988410 intron rk - chr2L_24_13985001 chr2L_13985001 RAL-321 461 chr2L 14056786 14056837 chr2L 14056892 14056941 24 105 5.5 4.5 5.0 4.0 155 chr2L 14056786 intron nAChRalpha5 + chr2L 14056864 intron nAChRalpha5 + chr2L 14056941 intron nAChRalpha5 + chr2L_24_14055001 chr2L_14055001 RAL-321 462 chr2L 14086675 14086684 chr2L 14086784 14086805 6 110 0.0 8.5 4.2 1.2 130 chr2L 14086675 intron nAChRalpha5 + chr2L 14086740 intron nAChRalpha5 + chr2L 14086805 intron nAChRalpha5 + chr2L_6_14085001 chr2L_14085001 RAL-321 463 chr2L 14096141 14096163 chr2L 14096253 14096259 8 106 11.0 0.0 5.5 1.2 118 chr2L 14096141 intergenic not near genes chr2L 14096200 intergenic not near genes chr2L 14096259 intergenic not near genes chr2L_8_14095001 chr2L_14095001 RAL-321 464 chr2L 14109497 14109542 chr2L 14109608 14109653 20 111 10.0 7.0 8.5 2.1 156 chr2L 14109497 intergenic CG15293 -,CG31769 - chr2L 14109575 intergenic CG31769 -,CG15293 - chr2L 14109653 3` UTR CG31769 - chr2L_20_14105001 chr2L_14105001 RAL-321 465 chr2L 14125152 14125189 chr2L 14125527 14125558 10 381 6.0 6.5 6.2 1.4 406 chr2L 14125152 intergenic not near genes chr2L 14125355 intergenic not near genes chr2L 14125558 intergenic not near genes chr2L_10_14125001 chr2L_14125001 RAL-321 466 chr2L 14160667 14160717 chr2L 14160773 14160823 20 106 3.0 6.0 4.5 3.6 156 chr2L 14160667 intergenic CG17341 +,CG43332 - chr2L 14160745 intergenic CG17341 +,CG43332 - chr2L 14160823 intergenic CG17341 +,CG43332 - chr2L_20_14160001 chr2L_14160001 RAL-321 467 chr2L 14180042 14180094 chr2L 14180138 14180190 29 95 6.5 9.0 7.8 3.3 148 chr2L 14180042 intron CG43333 - chr2L 14180116 intron CG43333 - chr2L 14180190 intron CG43333 - chr2L_29_14180001 chr2L_14180001 RAL-321 468 chr2L 14222287 14222332 chr2L 14222394 14222398 17 100 5.5 7.0 6.2 2.4 111 chr2L 14222287 intron Dyrk2 - chr2L 14222342 intron Dyrk2 - chr2L 14222398 intron Dyrk2 - chr2L_17_14220001 chr2L_14220001 RAL-321 469 chr2L 14236218 14236272 chr2L 14236335 14236389 17 115 7.5 2.0 4.8 2.9 171 chr2L 14236218 5` UTR CR44728 + chr2L 14236304 5` UTR CR44728 + chr2L 14236389 intergenic CR44728 + chr2L_17_14235001 chr2L_14235001 RAL-321 470 chr2L 14257233 14257270 chr2L 14257344 14257357 20 119 8.0 4.0 6.0 2.9 124 chr2L 14257233 intergenic not near genes chr2L 14257295 intergenic not near genes chr2L 14257357 intergenic not near genes chr2L_20_14255001 chr2L_14255001 RAL-321 471 chr2L 14274891 14274914 chr2L 14274989 14275012 7 97 0.0 12.0 6.0 1.0 121 chr2L 14274891 intron,5` UTR wb +,CG32971 + chr2L 14274952 intron,intron wb +,CG32971 + chr2L 14275012 intron,intron wb +,CG32971 + chr2L_7_14270001 chr2L_14270001 RAL-321 472 chr2L 14374758 14374802 chr2L 14374869 14374913 21 110 8.0 3.5 5.8 3.1 155 chr2L 14374758 intergenic not near genes chr2L 14374836 intergenic not near genes chr2L 14374913 intergenic not near genes chr2L_21_14370001 chr2L_14370001 RAL-321 473 chr2L 14404274 14404316 chr2L 14404376 14404421 23 103 4.5 5.5 5.0 3.8 147 chr2L 14404274 intron elB - chr2L 14404348 intron elB - chr2L 14404421 intron elB - chr2L_23_14400001 chr2L_14400001 RAL-321 474 chr2L 14428442 14428465 chr2L 14428684 14428707 11 242 7.5 5.0 6.2 1.5 265 chr2L 14428442 intergenic CR44732 - chr2L 14428574 intergenic CR44732 - chr2L 14428707 3` UTR CR44732 - chr2L_11_14425001 chr2L_14425001 RAL-321 475 chr2L 14429414 14429449 chr2L 14429515 14429550 17 101 6.5 4.5 5.5 2.6 136 chr2L 14429414 3` UTR CR44732 - chr2L 14429482 3` UTR CR44732 - chr2L 14429550 3` UTR CR44732 - chr2L_17_14425001 chr2L_14425001 RAL-321 476 chr2L 14503415 14503434 chr2L 14503514 14503533 5 99 8.5 2.5 5.5 0.8 118 chr2L 14503415 intergenic not near genes chr2L 14503474 intergenic not near genes chr2L 14503533 intergenic not near genes chr2L_5_14500001 chr2L_14500001 RAL-321 477 chr2L 14518677 14518680 chr2L 14531001 14531004 4 12324 6.5 3.0 4.8 0.7 12327 chr2L 14518677 intergenic not near genes chr2L 14524840 intron CG33648 + chr2L 14531004 intergenic not near genes chr2L_4_14520001 chr2L_14520001 RAL-321 478 chr2L 14564219 14564231 chr2L 14564269 14564321 7 82 4.5 8.0 6.2 1.0 102 chr2L 14564219 intergenic CG3473 - chr2L 14564270 intergenic not near genes chr2L 14564321 intergenic not near genes chr2L_7_14560001 chr2L_14560001 RAL-321 479 chr2L 14586182 14586230 chr2L 14586280 14586330 25 97 5.0 4.0 4.5 4.5 148 chr2L 14586182 intergenic not near genes chr2L 14586256 intergenic not near genes chr2L 14586330 intergenic not near genes chr2L_25_14585001 chr2L_14585001 RAL-321 480 chr2L 14588367 14588419 chr2L 14588541 14588593 27 173 8.0 6.0 7.0 3.4 226 chr2L 14588367 intergenic CG42680 - chr2L 14588480 intergenic CG42680 - chr2L 14588593 intergenic CG42680 - chr2L_27_14585001 chr2L_14585001 RAL-321 481 chr2L 14621358 14621401 chr2L 14621478 14621521 19 117 7.0 5.0 6.0 2.7 163 chr2L 14621358 intron osp - chr2L 14621440 intron osp - chr2L 14621521 intron osp - chr2L_19_14620001 chr2L_14620001 RAL-321 482 chr2L 14624536 14624559 chr2L 14624635 14624658 11 99 7.5 3.0 5.2 1.8 122 chr2L 14624536 intron osp - chr2L 14624597 intron osp - chr2L 14624658 intron osp - chr2L_11_14620001 chr2L_14620001 RAL-321 483 chr2L 14642554 14642599 chr2L 14651737 14651782 roo 24 9182 10.0 7.5 8.8 2.4 9228 chr2L 14642554 intron osp - chr2L 14647168 intron osp - chr2L 14651782 intron osp - chr2L_24_14645001 chr2L_14645001 RAL-321 484 chr2L 14658665 14658716 chr2L 14658766 14658817 17 101 2.0 5.0 3.5 3.8 152 chr2L 14658665 intron osp - chr2L 14658741 intron osp - chr2L 14658817 intron osp - chr2L_17_14655001 chr2L_14655001 RAL-321 485 chr2L 14661155 14661193 chr2L 14661254 14661292 7 99 0.0 9.5 4.8 1.2 137 chr2L 14661155 intron osp - chr2L 14661224 intron osp - chr2L 14661292 intron osp - chr2L_7_14660001 chr2L_14660001 RAL-321 486 chr2L 14694234 14694288 chr2L 14694378 14694432 17 144 6.0 6.0 6.0 2.4 198 chr2L 14694234 intergenic not near genes chr2L 14694333 intergenic not near genes chr2L 14694432 intergenic not near genes chr2L_17_14690001 chr2L_14690001 RAL-321 487 chr2L 14761891 14761912 chr2L 14762010 14762031 7 119 7.0 6.0 6.5 0.9 140 chr2L 14761891 3` UTR CG4691 + chr2L 14761961 intergenic CR44858 +,CG4691 + chr2L 14762031 5` UTR CR44858 + chr2L_7_14760001 chr2L_14760001 RAL-321 488 chr2L 14771809 14771863 chr2L 14771911 14771965 13 98 0.0 3.0 1.5 5.2 156 chr2L 14771809 intergenic not near genes chr2L 14771887 intergenic not near genes chr2L 14771965 intergenic not near genes chr2L_13_14770001 chr2L_14770001 RAL-321 489 chr2L 14772688 14772738 chr2L 14772807 14772857 16 118 5.0 4.0 4.5 2.9 169 chr2L 14772688 intergenic not near genes chr2L 14772772 intergenic not near genes chr2L 14772857 intergenic not near genes chr2L_16_14770001 chr2L_14770001 RAL-321 490 chr2L 14781541 14781589 chr2L 14781662 14781709 21 120 8.5 6.0 7.2 2.6 168 chr2L 14781541 intergenic not near genes chr2L 14781625 intergenic not near genes chr2L 14781709 intergenic not near genes chr2L_21_14780001 chr2L_14780001 RAL-321 491 chr2L 14803858 14803911 chr2L 14809081 14809117 copia 22 5222 8.0 6.0 7.0 2.8 5259 chr2L 14803858 intergenic not near genes chr2L 14806488 intergenic not near genes chr2L 14809117 intergenic not near genes chr2L_22_14805001 chr2L_14805001 RAL-321 492 chr2L 14813388 14813437 chr2L 14813582 14813591 22 188 6.5 3.5 5.0 3.7 203 chr2L 14813388 intergenic not near genes chr2L 14813490 intergenic not near genes chr2L 14813591 intergenic not near genes chr2L_22_14810001 chr2L_14810001 RAL-321 493 chr2L 14833779 14833823 chr2L 14833903 14833947 12 121 3.5 4.5 4.0 2.4 168 chr2L 14833779 intergenic not near genes chr2L 14833863 intergenic not near genes chr2L 14833947 intergenic not near genes chr2L_12_14830001 chr2L_14830001 RAL-321 494 chr2L 14839731 14839737 chr2L 14839827 14839833 6 96 14.0 2.5 8.2 0.7 102 chr2L 14839731 intergenic not near genes chr2L 14839782 intergenic not near genes chr2L 14839833 intergenic not near genes chr2L_6_14835001 chr2L_14835001 RAL-321 495 chr2L 14839738 14839779 chr2L 14839824 14839875 12 94 4.5 2.5 3.5 2.7 137 chr2L 14839738 intergenic not near genes chr2L 14839806 intergenic not near genes chr2L 14839875 intergenic not near genes chr2L_12_14835001 chr2L_14835001 RAL-321 496 chr2L 14840978 14841006 chr2L 14841085 14841113 11 107 3.0 12.5 7.8 1.2 135 chr2L 14840978 3` UTR CR43805 - chr2L 14841046 3` UTR CR43805 - chr2L 14841113 3` UTR CR43805 - chr2L_11_14840001 chr2L_14840001 RAL-321 497 chr2L 14843481 14843513 chr2L 14843617 14843629 16 133 4.5 1.5 3.0 4.0 148 chr2L 14843481 intergenic CG42682 + chr2L 14843555 intergenic CG42682 + chr2L 14843629 intergenic not near genes chr2L_16_14840001 chr2L_14840001 RAL-321 498 chr2L 14889934 14889983 chr2L 14890379 14890428 jockey 26 445 3.5 4.5 4.0 5.2 494 chr2L 14889934 intergenic not near genes chr2L 14890181 intergenic not near genes chr2L 14890428 intergenic not near genes chr2L_26_14890001 chr2L_14890001 RAL-321 499 chr2L 14905721 14905762 chr2L 14905838 14905879 13 117 3.5 0.5 2.0 4.3 158 chr2L 14905721 intergenic not near genes chr2L 14905800 intergenic not near genes chr2L 14905879 intergenic not near genes chr2L_13_14905001 chr2L_14905001 RAL-321 500 chr2L 14982121 14982283 chr2L 14982248 14982389 26 114 0.0 0.0 0.0 26.0 268 chr2L 14982121 intron mol - chr2L 14982255 intron mol - chr2L 14982389 intron mol - chr2L_26_14980001 chr2L_14980001 RAL-321 501 chr2L 14984364 14984405 chr2L 14991986 14992027 opus 12 7621 7.0 5.0 6.0 1.7 7663 chr2L 14984364 intron mol - chr2L 14988196 intron mol - chr2L 14992027 intron mol - chr2L_12_14985001 chr2L_14985001 RAL-321 502 chr2L 15003524 15003571 chr2L 15003628 15003675 24 103 6.0 6.0 6.0 3.4 151 chr2L 15003524 intergenic not near genes chr2L 15003600 intergenic not near genes chr2L 15003675 intergenic not near genes chr2L_24_15000001 chr2L_15000001 RAL-321 503 chr2L 15013132 15013179 chr2L 15013256 15013308 13 125 3.5 5.0 4.2 2.5 176 chr2L 15013132 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013308 intergenic not near genes chr2L_13_15010001 chr2L_15010001 RAL-321 504 chr2L 15080883 15080929 chr2L 15080996 15081046 16 114 6.0 0.0 3.0 4.0 163 chr2L 15080883 intron CG15270 + chr2L 15080964 intron CG15270 + chr2L 15081046 intron CG15270 + chr2L_16_15080001 chr2L_15080001 RAL-321 505 chr2L 15098518 15098541 chr2L 15098618 15098636 15 99 13.0 1.5 7.2 1.8 118 chr2L 15098518 intergenic not near genes chr2L 15098577 intergenic not near genes chr2L 15098636 intergenic not near genes chr2L_15_15095001 chr2L_15095001 RAL-321 506 chr2L 15103839 15103864 chr2L 15103956 15103981 10 117 12.0 15.0 13.5 0.7 142 chr2L 15103839 intergenic not near genes chr2L 15103910 intergenic not near genes chr2L 15103981 intergenic not near genes chr2L_10_15100001 chr2L_15100001 RAL-321 507 chr2L 15137759 15137784 chr2L 15137863 15137877 9 103 10.0 0.5 5.2 1.5 118 chr2L 15137759 intergenic not near genes chr2L 15137818 intergenic not near genes chr2L 15137877 intergenic not near genes chr2L_9_15135001 chr2L_15135001 RAL-321 508 chr2L 15219666 15219694 chr2L 15219763 15219791 11 97 8.5 9.5 9.0 1.1 125 chr2L 15219666 intergenic not near genes chr2L 15219728 intergenic not near genes chr2L 15219791 intergenic not near genes chr2L_11_15215001 chr2L_15215001 RAL-321 509 chr2L 15226354 15226396 chr2L 15226450 15226492 14 90 5.5 4.0 4.8 2.4 138 chr2L 15226354 intergenic not near genes chr2L 15226423 intergenic not near genes chr2L 15226492 intergenic not near genes chr2L_14_15225001 chr2L_15225001 RAL-321 510 chr2L 15393248 15393296 chr2L 15393359 15393407 25 111 5.5 8.0 6.8 3.2 159 chr2L 15393248 intergenic not near genes chr2L 15393328 intergenic not near genes chr2L 15393407 intergenic not near genes chr2L_25_15390001 chr2L_15390001 RAL-321 511 chr2L 15446029 15446077 chr2L 15453518 15453566 blood 23 7489 6.5 3.0 4.8 4.0 7537 chr2L 15446029 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453566 intergenic not near genes chr2L_23_15445001 chr2L_15445001 RAL-321 512 chr2L 15476383 15476423 chr2L 15476562 15476602 16 179 5.0 7.5 6.2 2.2 219 chr2L 15476383 intergenic sna - chr2L 15476492 intergenic sna - chr2L 15476602 3` UTR sna - chr2L_16_15475001 chr2L_15475001 RAL-321 513 chr2L 15482559 15482587 chr2L 15482715 15482743 12 154 10.0 6.0 8.0 1.3 184 chr2L 15482559 intergenic not near genes chr2L 15482651 intergenic not near genes chr2L 15482743 intergenic not near genes chr2L_12_15480001 chr2L_15480001 RAL-321 514 chr2L 15482588 15482603 chr2L 15482714 15482759 11 152 6.5 5.5 6.0 1.6 171 chr2L 15482588 intergenic not near genes chr2L 15482674 intergenic not near genes chr2L 15482759 intergenic not near genes chr2L_11_15480001 chr2L_15480001 RAL-321 515 chr2L 15499891 15499945 chr2L 15499999 15500052 18 108 2.0 6.5 4.2 3.5 161 chr2L 15499891 intron lace + chr2L 15499972 intron lace + chr2L 15500052 intron lace + chr2L_18_15495001 chr2L_15495001 RAL-321 516 chr2L 15586394 15586437 chr2L 15593466 15593508 297 16 7070 7.0 5.0 6.0 2.3 7114 chr2L 15586394 intergenic not near genes chr2L 15589951 intergenic not near genes chr2L 15593508 intergenic not near genes chr2L_16_15585001 chr2L_15585001 RAL-321 517 chr2L 15598741 15598788 chr2L 15598847 15598894 17 105 5.5 6.0 5.8 2.5 153 chr2L 15598741 intergenic not near genes chr2L 15598818 intergenic not near genes chr2L 15598894 intergenic not near genes chr2L_17_15595001 chr2L_15595001 RAL-321 518 chr2L 15628401 15628410 chr2L 15628480 15628506 5 90 0.0 5.5 2.8 1.3 105 chr2L 15628401 intergenic CG7631 + chr2L 15628454 intergenic CG7631 + chr2L 15628506 intergenic CG7631 + chr2L_5_15625001 chr2L_15625001 RAL-321 519 chr2L 15643978 15644028 chr2L 15644081 15644129 21 91 4.0 6.5 5.2 3.4 151 chr2L 15643978 intergenic CG4587 - chr2L 15644054 intergenic CG4587 - chr2L 15644129 intergenic CG4587 - chr2L_21_15640001 chr2L_15640001 RAL-321 520 chr2L 15790165 15790217 chr2L 15790261 15790313 21 96 5.5 4.0 4.8 3.6 148 chr2L 15790165 intergenic CG18109 + chr2L 15790239 intergenic CG18109 + chr2L 15790313 intergenic CG18109 + chr2L_21_15790001 chr2L_15790001 RAL-321 521 chr2L 15823331 15823372 chr2L 15823427 15823468 16 96 4.0 3.0 3.5 3.6 137 chr2L 15823331 intergenic CR44601 - chr2L 15823400 intergenic CR44601 - chr2L 15823468 intergenic not near genes chr2L_16_15820001 chr2L_15820001 RAL-321 522 chr2L 15826874 15826891 chr2L 15829288 15829305 Tabor 11 2414 5.5 10.0 7.8 1.2 2431 chr2L 15826874 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829305 intergenic not near genes chr2L_11_15825001 chr2L_15825001 RAL-321 523 chr2L 15913626 15913664 chr2L 15913711 15913759 20 93 3.0 3.0 3.0 5.0 133 chr2L 15913626 intron beat-Ib - chr2L 15913692 intron beat-Ib - chr2L 15913759 intron beat-Ib - chr2L_20_15910001 chr2L_15910001 RAL-321 524 chr2L 15915637 15915663 chr2L 15915735 15915761 15 97 8.5 7.0 7.8 1.7 124 chr2L 15915637 intron beat-Ib - chr2L 15915699 intron beat-Ib - chr2L 15915761 intron beat-Ib - chr2L_15_15915001 chr2L_15915001 RAL-321 525 chr2L 15915665 15915682 chr2L 15915729 15915780 13 93 4.0 6.0 5.0 2.2 115 chr2L 15915665 intron beat-Ib - chr2L 15915722 intron beat-Ib - chr2L 15915780 intron beat-Ib - chr2L_13_15915001 chr2L_15915001 RAL-321 526 chr2L 15954164 15954211 chr2L 15954263 15954312 17 99 5.0 4.5 4.8 2.9 148 chr2L 15954164 intron beat-Ib - chr2L 15954238 intron beat-Ib - chr2L 15954312 intron beat-Ib - chr2L_17_15950001 chr2L_15950001 RAL-321 527 chr2L 15956003 15956048 chr2L 15957490 15957535 hobo 21 1485 11.0 5.0 8.0 2.3 1532 chr2L 15956003 intron beat-Ib - chr2L 15956769 intron beat-Ib - chr2L 15957535 intron beat-Ib - chr2L_21_15955001 chr2L_15955001 RAL-321 528 chr2L 15995207 15995210 chr2L 15995566 15995569 4 358 11.0 6.0 8.5 0.4 362 chr2L 15995207 intergenic not near genes chr2L 15995388 intergenic not near genes chr2L 15995569 intergenic not near genes chr2L_4_15995001 chr2L_15995001 RAL-321 529 chr2L 15995211 15995257 chr2L 15995565 15995616 15 358 3.5 5.5 4.5 2.7 405 chr2L 15995211 intergenic not near genes chr2L 15995414 intergenic not near genes chr2L 15995616 intergenic not near genes chr2L_15_15995001 chr2L_15995001 RAL-321 530 chr2L 16001443 16001492 chr2L 16001551 16001600 31 107 0.0 4.5 2.2 9.7 157 chr2L 16001443 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001600 intron beat-Ic + chr2L_31_16000001 chr2L_16000001 RAL-321 531 chr2L 16008673 16008724 chr2L 16008771 16008822 12 98 3.0 2.0 2.5 3.4 149 chr2L 16008673 intron beat-Ic + chr2L 16008748 intron beat-Ic + chr2L 16008822 intron beat-Ic + chr2L_12_16005001 chr2L_16005001 RAL-321 532 chr2L 16022183 16022222 chr2L 16022505 16022544 11 322 6.0 2.5 4.2 2.1 361 chr2L 16022183 intron beat-Ic + chr2L 16022364 intron beat-Ic + chr2L 16022544 intron beat-Ic + chr2L_11_16020001 chr2L_16020001 RAL-321 533 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 20 145889 28.0 30.0 29.0 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_20_16140001 chr2L_16140001 RAL-321 534 chr2L 16090161 16090196 chr2L 16090271 16090289 17 107 4.0 0.0 2.0 5.7 128 chr2L 16090161 intergenic not near genes chr2L 16090225 intergenic not near genes chr2L 16090289 intergenic not near genes chr2L_17_16090001 chr2L_16090001 RAL-321 535 chr2L 16098907 16098947 chr2L 16099015 16099055 17 108 3.5 8.0 5.8 2.5 148 chr2L 16098907 intergenic not near genes chr2L 16098981 intergenic not near genes chr2L 16099055 intergenic not near genes chr2L_17_16095001 chr2L_16095001 RAL-321 536 chr2L 16141150 16141155 chr2L 16146377 16146382 copia 5 5227 10.5 6.5 8.5 0.5 5232 chr2L 16141150 intergenic not near genes chr2L 16143766 intergenic not near genes chr2L 16146382 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-321 537 chr2L 16141156 16141192 chr2L 16146370 16146419 copia 17 5226 2.0 6.0 4.0 3.4 5263 chr2L 16141156 intergenic not near genes chr2L 16143788 intergenic not near genes chr2L 16146419 intergenic not near genes chr2L_17_16140001 chr2L_16140001 RAL-321 538 chr2L 16153725 16153760 chr2L 16160813 16160848 297 20 7088 8.0 3.0 5.5 3.1 7123 chr2L 16153725 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160848 intergenic not near genes chr2L_20_16155001 chr2L_16155001 RAL-321 539 chr2L 16201563 16201587 chr2L 16201691 16201712 11 126 10.0 8.0 9.0 1.1 149 chr2L 16201563 intergenic not near genes chr2L 16201638 intergenic not near genes chr2L 16201712 intergenic not near genes chr2L_11_16200001 chr2L_16200001 RAL-321 540 chr2L 16201589 16201609 chr2L 16201684 16201717 10 114 5.5 6.0 5.8 1.5 128 chr2L 16201589 intergenic not near genes chr2L 16201653 intergenic not near genes chr2L 16201717 intergenic not near genes chr2L_10_16200001 chr2L_16200001 RAL-321 541 chr2L 9084337 9084340 chr2L 16217660 16217660 8 7133321 24.0 30.0 27.0 0.3 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-321 542 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 28.0 30.0 29.0 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-321 543 chr2L 16242055 16242088 chr2L 16242167 16242200 8 111 4.0 2.5 3.2 1.9 145 chr2L 16242055 5` UTR CG42818 + chr2L 16242128 exon CG42818 + chr2L 16242200 exon CG42818 + chr2L_8_16240001 chr2L_16240001 RAL-321 544 chr2L 16243677 16243836 chr2L 16243780 16243951 25 108 4.0 4.5 4.2 4.8 274 chr2L 16243677 exon CG42818 + chr2L 16243814 exon CG42818 + chr2L 16243951 exon CG42818 + chr2L_25_16240001 chr2L_16240001 RAL-321 545 chr2L 16254872 16254917 chr2L 16255151 16255196 17 279 2.5 5.0 3.8 3.5 324 chr2L 16254872 intron PRL-1 - chr2L 16255034 intron PRL-1 - chr2L 16255196 intron PRL-1 - chr2L_17_16255001 chr2L_16255001 RAL-321 546 chr2L 16280239 16280278 chr2L 16281425 16281463 1360 12 1184 7.0 9.5 8.2 1.3 1224 chr2L 16280239 intron crp - chr2L 16280851 intron crp - chr2L 16281463 intron crp - chr2L_12_16280001 chr2L_16280001 RAL-321 547 chr2L 16354758 16354786 chr2L 16354870 16354893 9 111 5.0 3.0 4.0 1.8 135 chr2L 16354758 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354893 3` UTR CaBP1 - chr2L_9_16350001 chr2L_16350001 RAL-321 548 chr2L 16363922 16363972 chr2L 16364188 16364188 8 259 8.5 0.0 4.2 1.5 266 chr2L 16363922 intergenic not near genes chr2L 16364055 intergenic not near genes chr2L 16364188 intergenic not near genes chr2L_8_16360001 chr2L_16360001 RAL-321 549 chr2L 16367082 16367129 chr2L 16367179 16367226 26 96 4.0 5.5 4.8 4.5 144 chr2L 16367082 intergenic jhamt + chr2L 16367154 intergenic jhamt + chr2L 16367226 intergenic jhamt + chr2L_26_16365001 chr2L_16365001 RAL-321 550 chr2L 16384763 16384798 chr2L 16384860 16384891 14 95 7.0 0.0 3.5 3.1 128 chr2L 16384763 intergenic not near genes chr2L 16384827 intergenic not near genes chr2L 16384891 intergenic not near genes chr2L_14_16380001 chr2L_16380001 RAL-321 551 chr2L 16408102 16408107 chr2L 16408229 16408234 5 127 0.0 4.0 2.0 1.7 132 chr2L 16408102 intron CG5888 - chr2L 16408168 intron CG5888 - chr2L 16408234 intron CG5888 - chr2L_5_16405001 chr2L_16405001 RAL-321 552 chr2L 16428581 16428587 chr2L 16428680 16428686 7 99 14.0 8.5 11.2 0.6 105 chr2L 16428581 intron CG5888 - chr2L 16428634 intron CG5888 - chr2L 16428686 intron CG5888 - chr2L_7_16425001 chr2L_16425001 RAL-321 553 chr2L 16428589 16428630 chr2L 16428679 16428729 18 97 4.5 8.0 6.2 2.5 140 chr2L 16428589 intron CG5888 - chr2L 16428659 intron CG5888 - chr2L 16428729 intron CG5888 - chr2L_18_16425001 chr2L_16425001 RAL-321 554 chr2L 16458808 16458854 chr2L 16459024 16459070 8 216 0.0 3.0 1.5 3.2 262 chr2L 16458808 intergenic not near genes chr2L 16458939 intergenic not near genes chr2L 16459070 intergenic not near genes chr2L_8_16455001 chr2L_16455001 RAL-321 555 chr2L 16480585 16480636 chr2L 16480693 16480744 16 108 5.5 9.5 7.5 1.9 159 chr2L 16480585 intron dac - chr2L 16480664 intron dac - chr2L 16480744 intron dac - chr2L_16_16480001 chr2L_16480001 RAL-321 556 chr2L 16507954 16507966 chr2L 16508062 16508074 7 108 0.0 15.5 7.8 0.8 120 chr2L 16507954 intergenic CG5953 -,Tpr2 + chr2L 16508014 intergenic CG5953 -,Tpr2 + chr2L 16508074 intergenic CG5953 -,Tpr2 + chr2L_7_16505001 chr2L_16505001 RAL-321 557 chr2L 16511965 16511991 chr2L 16519112 16519138 HMS-Beagle 12 7147 5.0 5.5 5.2 1.9 7173 chr2L 16511965 intron CG5953 - chr2L 16515552 intron CG5953 - chr2L 16519138 intron CG5953 - chr2L_12_16515001 chr2L_16515001 RAL-321 558 chr2L 16535228 16535283 chr2L 16535368 16535423 25 140 6.0 5.0 5.5 3.8 195 chr2L 16535228 3` UTR CR45355 - chr2L 16535326 intergenic CR45355 - chr2L 16535423 intergenic CR45355 - chr2L_25_16535001 chr2L_16535001 RAL-321 559 chr2L 16573239 16573262 chr2L 16573325 16573364 8 92 10.0 7.5 8.8 0.8 125 chr2L 16573239 intron CG42389 + chr2L 16573302 intron CG42389 + chr2L 16573364 intron CG42389 + chr2L_8_16570001 chr2L_16570001 RAL-321 560 chr2L 16583073 16583123 chr2L 16583181 16583225 18 107 1.0 3.0 2.0 6.0 152 chr2L 16583073 intron CG42389 + chr2L 16583149 intron CG42389 + chr2L 16583225 intron CG42389 + chr2L_18_16580001 chr2L_16580001 RAL-321 561 chr2L 16583534 16583582 chr2L 16583688 16583736 25 154 7.0 4.5 5.8 3.7 202 chr2L 16583534 intron CG42389 + chr2L 16583635 intron CG42389 + chr2L 16583736 intron CG42389 + chr2L_25_16580001 chr2L_16580001 RAL-321 562 chr2L 16695238 16695292 chr2L 16695342 16695396 25 104 5.0 4.5 4.8 4.3 158 chr2L 16695238 intron grp + chr2L 16695317 intron grp + chr2L 16695396 intron grp + chr2L_25_16695001 chr2L_16695001 RAL-321 563 chr2L 16697055 16697086 chr2L 16697268 16697312 8 215 4.5 0.0 2.2 2.5 257 chr2L 16697055 intron grp + chr2L 16697184 intron grp + chr2L 16697312 intron grp + chr2L_8_16695001 chr2L_16695001 RAL-321 564 chr2L 16709057 16709103 chr2L 16709161 16709207 10 103 7.5 5.0 6.2 1.4 150 chr2L 16709057 intron CG31808 - chr2L 16709132 intron CG31808 - chr2L 16709207 intron CG31808 - chr2L_10_16705001 chr2L_16705001 RAL-321 565 chr2L 16728962 16728980 chr2L 16729087 16729104 9 125 6.5 6.5 6.5 1.2 142 chr2L 16728962 intergenic not near genes chr2L 16729033 intergenic not near genes chr2L 16729104 intergenic not near genes chr2L_9_16725001 chr2L_16725001 RAL-321 566 chr2L 16764952 16764999 chr2L 16765051 16765099 19 99 5.0 4.0 4.5 3.5 147 chr2L 16764952 intergenic not near genes chr2L 16765026 intergenic not near genes chr2L 16765099 intergenic not near genes chr2L_19_16765001 chr2L_16765001 RAL-321 567 chr2L 16791202 16791246 chr2L 16791308 16791352 23 106 5.5 8.5 7.0 2.9 150 chr2L 16791202 intergenic CG17928 +,Cyt-b5-r - chr2L 16791277 intergenic CG17928 + chr2L 16791352 intergenic CG17928 + chr2L_23_16790001 chr2L_16790001 RAL-321 568 chr2L 16796067 16796103 chr2L 16796188 16796224 19 119 0.5 4.0 2.2 5.9 157 chr2L 16796067 intergenic Ugt36Ba + chr2L 16796146 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796224 intergenic Ugt36Ba +,Ugt36Bb + chr2L_19_16795001 chr2L_16795001 RAL-321 569 chr2L 16867006 16867040 chr2L 16867121 16867155 19 115 4.0 6.5 5.2 3.1 149 chr2L 16867006 intergenic not near genes chr2L 16867080 intergenic not near genes chr2L 16867155 intergenic not near genes chr2L_19_16865001 chr2L_16865001 RAL-321 570 chr2L 16878871 16878919 chr2L 16878977 16879027 7 107 4.5 2.0 3.2 1.7 156 chr2L 16878871 exon CG32832 - chr2L 16878949 intron CG32832 - chr2L 16879027 exon CG32832 - chr2L_7_16875001 chr2L_16875001 RAL-321 571 chr2L 16927522 16927557 chr2L 16928198 16928223 11 671 8.5 0.0 4.2 2.1 701 chr2L 16927522 intergenic not near genes chr2L 16927872 intergenic not near genes chr2L 16928223 intergenic not near genes chr2L_11_16925001 chr2L_16925001 RAL-321 572 chr2L 16939991 16940014 chr2L 16940076 16940106 5 90 5.0 8.5 6.8 0.6 115 chr2L 16939991 intergenic not near genes chr2L 16940048 intergenic not near genes chr2L 16940106 intergenic not near genes chr2L_5_16940001 chr2L_16940001 RAL-321 573 chr2L 16958083 16958134 chr2L 16962891 16962932 Doc 25 4807 4.5 3.5 4.0 5.0 4849 chr2L 16958083 intergenic not near genes chr2L 16960508 intergenic not near genes chr2L 16962932 intergenic not near genes chr2L_25_16960001 chr2L_16960001 RAL-321 574 chr2L 17005392 17005436 chr2L 17005509 17005553 11 117 3.0 3.5 3.2 2.6 161 chr2L 17005392 intergenic not near genes chr2L 17005472 intergenic not near genes chr2L 17005553 intergenic not near genes chr2L_11_17005001 chr2L_17005001 RAL-321 575 chr2L 17070179 17070219 chr2L 17070295 17070335 18 116 7.0 5.5 6.2 2.5 156 chr2L 17070179 intergenic not near genes chr2L 17070257 intergenic not near genes chr2L 17070335 intergenic not near genes chr2L_18_17070001 chr2L_17070001 RAL-321 576 chr2L 17079840 17079855 chr2L 17079938 17079953 8 97 7.0 5.0 6.0 1.1 113 chr2L 17079840 intergenic not near genes chr2L 17079896 intergenic not near genes chr2L 17079953 intergenic not near genes chr2L_8_17075001 chr2L_17075001 RAL-321 577 chr2L 17079856 17079880 chr2L 17079934 17079962 12 89 6.0 5.0 5.5 1.8 106 chr2L 17079856 intergenic not near genes chr2L 17079909 intergenic not near genes chr2L 17079962 intergenic not near genes chr2L_12_17075001 chr2L_17075001 RAL-321 578 chr2L 17087369 17087401 chr2L 17087501 17087539 12 133 7.0 8.5 7.8 1.4 170 chr2L 17087369 intergenic CG12620 + chr2L 17087454 intergenic CG12620 + chr2L 17087539 intergenic CG12620 + chr2L_12_17085001 chr2L_17085001 RAL-321 579 chr2L 17097163 17097197 chr2L 17097272 17097306 4 109 1.0 3.5 2.2 1.2 143 chr2L 17097163 intergenic not near genes chr2L 17097234 intergenic not near genes chr2L 17097306 intergenic not near genes chr2L_4_17095001 chr2L_17095001 RAL-321 580 chr2L 17101882 17101916 chr2L 17101979 17102013 12 97 6.0 8.0 7.0 1.5 131 chr2L 17101882 intergenic not near genes chr2L 17101948 intergenic not near genes chr2L 17102013 intergenic not near genes chr2L_12_17100001 chr2L_17100001 RAL-321 581 chr2L 17120821 17120872 chr2L 17120920 17120971 17 96 4.0 3.5 3.8 3.5 150 chr2L 17120821 intergenic not near genes chr2L 17120896 intergenic not near genes chr2L 17120971 intergenic not near genes chr2L_17_17120001 chr2L_17120001 RAL-321 582 chr2L 17137641 17137675 chr2L 17137853 17137887 12 212 4.0 5.0 4.5 2.2 246 chr2L 17137641 intron,intron CG34106 +,beat-IIIa + chr2L 17137764 intron,intron CG34106 +,beat-IIIa + chr2L 17137887 intron,intron CG34106 +,beat-IIIa + chr2L_12_17135001 chr2L_17135001 RAL-321 583 chr2L 17158715 17158752 chr2L 17158831 17158875 10 122 4.5 4.5 4.5 1.8 160 chr2L 17158715 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158795 intron,intron CG34106 +,beat-IIIa + chr2L 17158875 intron,intron CG34106 +,beat-IIIa + chr2L_10_17155001 chr2L_17155001 RAL-321 584 chr2L 17167545 17167596 chr2L 17167806 17167857 pogo 24 260 5.0 4.5 4.8 4.1 312 chr2L 17167545 intron,intron CG34106 +,beat-IIIa + chr2L 17167701 intron,intron CG34106 +,beat-IIIa + chr2L 17167857 intron,intron CG34106 +,beat-IIIa + chr2L_24_17165001 chr2L_17165001 RAL-321 585 chr2L 17178390 17178398 chr2L 17178511 17178519 7 121 4.0 0.0 2.0 2.3 129 chr2L 17178390 intergenic Gr36b +,Gr36a + chr2L 17178454 intergenic Gr36b + chr2L 17178519 intergenic Gr36b + chr2L_7_17175001 chr2L_17175001 RAL-321 586 chr2L 17193847 17193868 chr2L 17193954 17193975 7 107 0.0 0.0 0.0 7.0 128 chr2L 17193847 intron beat-IIIc - chr2L 17193911 intron beat-IIIc - chr2L 17193975 intron beat-IIIc - chr2L_7_17190001 chr2L_17190001 RAL-321 587 chr2L 17199147 17199184 chr2L 17200634 17200671 hobo 13 1487 9.0 4.5 6.8 1.7 1524 chr2L 17199147 intron beat-IIIc - chr2L 17199909 intron beat-IIIc - chr2L 17200671 intron beat-IIIc - chr2L_13_17195001 chr2L_17195001 RAL-321 588 chr2L 17204029 17204077 chr2L 17204125 17204174 11 94 3.0 6.0 4.5 2.0 145 chr2L 17204029 intron beat-IIIc - chr2L 17204102 intron beat-IIIc - chr2L 17204174 intron beat-IIIc - chr2L_11_17200001 chr2L_17200001 RAL-321 589 chr2L 17273180 17273220 chr2L 17277983 17278023 F-element 12 4801 5.0 4.0 4.5 2.2 4843 chr2L 17273180 intergenic not near genes chr2L 17275602 intergenic not near genes chr2L 17278023 intergenic not near genes chr2L_12_17275001 chr2L_17275001 RAL-321 590 chr2L 17280977 17281031 chr2L 17281075 17281119 11 93 6.0 7.5 6.8 1.4 142 chr2L 17280977 intergenic CR45729 + chr2L 17281048 intergenic not near genes chr2L 17281119 intergenic not near genes chr2L_11_17280001 chr2L_17280001 RAL-321 591 chr2L 17287047 17287072 chr2L 17287163 17287187 6 120 2.0 9.0 5.5 0.9 140 chr2L 17287047 exon CG15140 + chr2L 17287117 exon CG15140 + chr2L 17287187 exon CG15140 + chr2L_6_17285001 chr2L_17285001 RAL-321 592 chr2L 17292346 17292394 chr2L 17292446 17292495 13 98 3.5 7.5 5.5 2.0 149 chr2L 17292346 intergenic CG6380 - chr2L 17292420 intergenic CG6380 - chr2L 17292495 intergenic CG6380 - chr2L_13_17290001 chr2L_17290001 RAL-321 593 chr2L 17327890 17327926 chr2L 17327996 17328032 17 104 9.0 11.0 10.0 1.5 142 chr2L 17327890 intergenic not near genes chr2L 17327961 intergenic not near genes chr2L 17328032 intergenic not near genes chr2L_17_17325001 chr2L_17325001 RAL-321 594 chr2L 17335520 17335572 chr2L 17336714 17336758 1360 6 1192 0.0 5.5 2.8 1.6 1238 chr2L 17335520 intergenic not near genes chr2L 17336139 intergenic not near genes chr2L 17336758 intergenic not near genes chr2L_6_17335001 chr2L_17335001 RAL-321 595 chr2L 17424686 17424738 chr2L 17424818 17424870 11 130 5.0 1.5 3.2 2.6 184 chr2L 17424686 intron Dif - chr2L 17424778 intron Dif - chr2L 17424870 intron Dif - chr2L_11_17420001 chr2L_17420001 RAL-321 596 chr2L 17425747 17425796 chr2L 17425894 17425943 16 145 4.0 4.5 4.2 3.1 196 chr2L 17425747 intron Dif - chr2L 17425845 intron Dif - chr2L 17425943 intron Dif - chr2L_16_17425001 chr2L_17425001 RAL-321 597 chr2L 17431999 17432039 chr2L 17432130 17432166 1360 5 128 0.0 7.5 3.8 1.0 167 chr2L 17431999 intron Dif - chr2L 17432082 intron Dif - chr2L 17432166 intron Dif - chr2L_5_17430001 chr2L_17430001 RAL-321 598 chr2L 17503201 17503252 chr2L 17503298 17503349 27 97 5.5 8.5 7.0 3.4 148 chr2L 17503201 intron Dhc36C + chr2L 17503275 intron Dhc36C + chr2L 17503349 intron Dhc36C + chr2L_27_17500001 chr2L_17500001 RAL-321 599 chr2L 17533416 17533427 chr2L 17533523 17533534 6 107 9.0 3.5 6.2 0.8 118 chr2L 17533416 intergenic not near genes chr2L 17533475 intergenic not near genes chr2L 17533534 intergenic not near genes chr2L_6_17530001 chr2L_17530001 RAL-321 600 chr2L 17607466 17607478 chr2L 17607584 17607596 6 118 14.5 1.0 7.8 0.7 130 chr2L 17607466 intergenic CR44412 - chr2L 17607531 intergenic CR44412 - chr2L 17607596 intergenic CR44412 - chr2L_6_17605001 chr2L_17605001 RAL-321 601 chr2L 17687496 17687522 chr2L 17692261 17692287 F-element 9 4765 4.5 4.5 4.5 1.6 4791 chr2L 17687496 intron CadN - chr2L 17689892 intron CadN - chr2L 17692287 intron CadN - chr2L_9_17685001 chr2L_17685001 RAL-321 602 chr2L 11173950 11173953 chr2L 17719736 17719739 5 6545786 32.0 12.0 22.0 0.2 6545789 chr2L 11173950 intron Ca-beta - chr2L 14446844 intergenic not near genes chr2L 17719739 intron CadN - chr2L_5_14445001 chr2L_14445001 RAL-321 603 chr2L 17723768 17723802 chr2L 17723881 17723915 11 113 2.5 3.5 3.0 2.8 147 chr2L 17723768 intron CadN - chr2L 17723842 intron CadN - chr2L 17723915 intron CadN - chr2L_11_17720001 chr2L_17720001 RAL-321 604 chr2L 17727849 17727880 chr2L 17729336 17729360 hobo 9 1484 6.0 15.0 10.5 0.8 1511 chr2L 17727849 intron CadN - chr2L 17728604 intron CadN - chr2L 17729360 intron CadN - chr2L_9_17725001 chr2L_17725001 RAL-321 605 chr2L 17747983 17748021 chr2L 17748070 17748118 15 92 6.0 5.0 5.5 2.3 135 chr2L 17747983 intron CadN - chr2L 17748050 intron CadN - chr2L 17748118 intron CadN - chr2L_15_17745001 chr2L_17745001 RAL-321 606 chr2L 17784631 17784665 chr2L 17784749 17784783 18 118 9.5 6.0 7.8 2.0 152 chr2L 17784631 intergenic not near genes chr2L 17784707 intergenic not near genes chr2L 17784783 intergenic not near genes chr2L_18_17780001 chr2L_17780001 RAL-321 607 chr2L 17796004 17796041 chr2L 17796105 17796142 12 101 4.0 4.5 4.2 2.3 138 chr2L 17796004 intron CadN2 - chr2L 17796073 intron CadN2 - chr2L 17796142 intron CadN2 - chr2L_12_17795001 chr2L_17795001 RAL-321 608 chr2L 17819900 17819943 chr2L 17825124 17825154 copia 13 5223 7.5 5.5 6.5 1.7 5254 chr2L 17819900 intron CadN2 - chr2L 17822527 intron CadN2 - chr2L 17825154 intron CadN2 - chr2L_13_17820001 chr2L_17820001 RAL-321 609 chr2L 17828222 17828259 chr2L 17828346 17828351 16 121 7.5 7.0 7.2 2.0 129 chr2L 17828222 intron CadN2 - chr2L 17828286 intron CadN2 - chr2L 17828351 intron CadN2 - chr2L_16_17825001 chr2L_17825001 RAL-321 610 chr2L 17880577 17880620 chr2L 17880709 17880752 24 131 3.5 7.0 5.2 3.9 175 chr2L 17880577 intergenic not near genes chr2L 17880664 intergenic not near genes chr2L 17880752 intergenic not near genes chr2L_24_17880001 chr2L_17880001 RAL-321 611 chr2L 17911940 17911975 chr2L 17914138 17914148 pogo 20 2195 9.0 5.5 7.2 2.4 2208 chr2L 17911940 intergenic not near genes chr2L 17913044 intergenic not near genes chr2L 17914148 intergenic CG43271 - chr2L_20_17910001 chr2L_17910001 RAL-321 612 chr2L 17938668 17938721 chr2L 17938774 17938827 26 106 5.5 2.0 3.8 5.4 159 chr2L 17938668 intergenic CR44399 - chr2L 17938748 intergenic CR44399 - chr2L 17938827 intergenic CR44399 - chr2L_26_17935001 chr2L_17935001 RAL-321 613 chr2L 17943878 17943891 chr2L 17944001 17944014 9 123 12.5 6.0 9.2 0.9 136 chr2L 17943878 intergenic not near genes chr2L 17943946 intergenic not near genes chr2L 17944014 intergenic not near genes chr2L_9_17940001 chr2L_17940001 RAL-321 614 chr2L 17943893 17943920 chr2L 17943998 17944043 12 120 6.5 5.0 5.8 1.8 150 chr2L 17943893 intergenic not near genes chr2L 17943968 intergenic not near genes chr2L 17944043 intergenic not near genes chr2L_12_17940001 chr2L_17940001 RAL-321 615 chr2L 17951930 17951978 chr2L 17953417 17953465 hobo 26 1487 4.0 7.5 5.8 3.8 1535 chr2L 17951930 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953465 intergenic not near genes chr2L_26_17950001 chr2L_17950001 RAL-321 616 chr2L 18051857 18051903 chr2L 18061024 18061070 roo 18 9163 8.5 7.0 7.8 2.0 9213 chr2L 18051857 intron rdo + chr2L 18056464 intron rdo + chr2L 18061070 intron rdo + chr2L_18_18055001 chr2L_18055001 RAL-321 617 chr2L 18095571 18095590 chr2L 18095672 18095691 11 101 8.0 5.0 6.5 1.5 120 chr2L 18095571 intergenic not near genes chr2L 18095631 intergenic not near genes chr2L 18095691 intergenic not near genes chr2L_11_18095001 chr2L_18095001 RAL-321 618 chr2L 18111221 18111254 chr2L 18111332 18111351 7 109 10.5 7.0 8.8 0.7 130 chr2L 18111221 intergenic not near genes chr2L 18111286 intergenic not near genes chr2L 18111351 intergenic not near genes chr2L_7_18110001 chr2L_18110001 RAL-321 619 chr2L 18230543 18230590 chr2L 18230936 18230983 11 388 6.5 6.0 6.2 1.5 440 chr2L 18230543 intron CG42750 - chr2L 18230763 intron CG42750 - chr2L 18230983 intron CG42750 - chr2L_11_18230001 chr2L_18230001 RAL-321 620 chr2L 18243357 18243388 chr2L 18243454 18243485 6 96 9.0 5.0 7.0 0.8 128 chr2L 18243357 intron CG42750 - chr2L 18243421 intron CG42750 - chr2L 18243485 intron CG42750 - chr2L_6_18240001 chr2L_18240001 RAL-321 621 chr2L 18262758 18262799 chr2L 18262890 18262938 25 138 8.0 5.0 6.5 3.3 180 chr2L 18262758 intron CG42750 - chr2L 18262848 intron CG42750 - chr2L 18262938 intron CG42750 - chr2L_25_18260001 chr2L_18260001 RAL-321 622 chr2L 18263073 18263124 chr2L 18263188 18263239 25 115 5.0 8.5 6.8 3.2 166 chr2L 18263073 intron CG42750 - chr2L 18263156 intron CG42750 - chr2L 18263239 intron CG42750 - chr2L_25_18260001 chr2L_18260001 RAL-321 623 chr2L 18298927 18298960 chr2L 18299008 18299026 15 85 4.5 2.5 3.5 3.3 99 chr2L 18298927 intergenic not near genes chr2L 18298976 intergenic not near genes chr2L 18299026 intergenic not near genes chr2L_15_18295001 chr2L_18295001 RAL-321 624 chr2L 18307877 18307914 chr2L 18307974 18308011 18 96 7.0 2.5 4.8 3.1 134 chr2L 18307877 intergenic CR43353 - chr2L 18307944 intergenic CR43353 - chr2L 18308011 intergenic CR43353 - chr2L_18_18305001 chr2L_18305001 RAL-321 625 chr2L 18364241 18364283 chr2L 18364361 18364403 15 119 7.0 4.5 5.8 2.2 162 chr2L 18364241 intron Fas3 + chr2L 18364322 intron Fas3 + chr2L 18364403 intron Fas3 + chr2L_15_18360001 chr2L_18360001 RAL-321 626 chr2L 18382072 18382122 chr2L 18382206 18382246 17 132 3.5 5.0 4.2 3.3 174 chr2L 18382072 intron Fas3 + chr2L 18382159 intron Fas3 + chr2L 18382246 intron Fas3 + chr2L_17_18380001 chr2L_18380001 RAL-321 627 chr2L 18394380 18394429 chr2L 18394484 18394533 22 97 5.0 8.0 6.5 2.9 153 chr2L 18394380 intergenic not near genes chr2L 18394456 intergenic not near genes chr2L 18394533 intergenic not near genes chr2L_22_18390001 chr2L_18390001 RAL-321 628 chr2L 18408009 18408034 chr2L 18412813 18412838 Doc 9 4804 11.0 0.0 5.5 1.4 4829 chr2L 18408009 intergenic not near genes chr2L 18410424 intergenic not near genes chr2L 18412838 intergenic not near genes chr2L_9_18410001 chr2L_18410001 RAL-321 629 chr2L 18538546 18538591 chr2L 18538648 18538692 18 102 0.0 6.0 3.0 4.5 146 chr2L 18538546 intron Pde11 - chr2L 18538619 intron Pde11 - chr2L 18538692 intron Pde11 - chr2L_18_18535001 chr2L_18535001 RAL-321 630 chr2L 18552589 18552632 chr2L 18552697 18552740 14 106 4.0 8.0 6.0 2.0 151 chr2L 18552589 intron Pde11 - chr2L 18552664 intron Pde11 - chr2L 18552740 intron Pde11 - chr2L_14_18550001 chr2L_18550001 RAL-321 631 chr2L 18630777 18630824 chr2L 18630878 18630915 26 100 3.0 8.0 5.5 4.0 138 chr2L 18630777 intron MESR3 + chr2L 18630846 intron MESR3 + chr2L 18630915 intron MESR3 + chr2L_26_18630001 chr2L_18630001 RAL-321 632 chr2L 18766436 18766449 chr2L 18766577 18766577 4 138 12.0 0.0 6.0 0.6 141 chr2L 18766436 intron ham - chr2L 18766506 intron ham - chr2L 18766577 intron ham - chr2L_4_18765001 chr2L_18765001 RAL-321 633 chr2L 18811398 18811427 chr2L 18811500 18811529 12 101 8.5 0.0 4.2 2.3 131 chr2L 18811398 intergenic CG10570 -,CG42502 - chr2L 18811464 intergenic CG10570 -,CG42502 - chr2L 18811529 intergenic not near genes chr2L_12_18810001 chr2L_18810001 RAL-321 634 chr2L 18812542 18812557 chr2L 18812825 18812840 9 282 4.5 5.0 4.8 1.6 298 chr2L 18812542 intergenic CG17325 +,CG42305 + chr2L 18812691 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812840 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_9_18810001 chr2L_18810001 RAL-321 635 chr2L 18812563 18812588 chr2L 18812821 18812871 17 279 4.5 3.5 4.0 3.4 308 chr2L 18812563 intergenic CG17325 +,CG42305 + chr2L 18812717 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812871 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_17_18810001 chr2L_18810001 RAL-321 636 chr2L 18883834 18883884 chr2L 18883936 18883986 21 100 3.5 9.5 6.5 2.8 152 chr2L 18883834 intergenic not near genes chr2L 18883910 intergenic not near genes chr2L 18883986 intergenic not near genes chr2L_21_18880001 chr2L_18880001 RAL-321 637 chr2L 18898379 18898426 chr2L 18898481 18898528 16 101 5.0 0.5 2.8 4.2 149 chr2L 18898379 intergenic not near genes chr2L 18898454 intergenic not near genes chr2L 18898528 intergenic not near genes chr2L_16_18895001 chr2L_18895001 RAL-321 638 chr2L 19001991 19002044 chr2L 19002098 19002125 10 94 5.0 6.0 5.5 1.5 134 chr2L 19001991 exon CG31792 + chr2L 19002058 exon CG31792 + chr2L 19002125 exon CG31792 + chr2L_10_19000001 chr2L_19000001 RAL-321 639 chr2L 19024096 19024097 chr2L 21768291 21768291 9 2744195 19.0 24.0 21.5 0.4 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_9_20395001 chr2L_20395001 RAL-321 640 chr2L 19070261 19070299 chr2L 19070359 19070412 5 103 4.5 6.0 5.2 0.8 151 chr2L 19070261 intergenic CG10702 - chr2L 19070336 intergenic CG10702 - chr2L 19070412 intergenic not near genes chr2L_5_19070001 chr2L_19070001 RAL-321 641 chr2L 19147349 19147367 chr2L 19154404 19154422 297 9 7054 12.5 3.5 8.0 1.0 7073 chr2L 19147349 intron brat + chr2L 19150886 intron brat + chr2L 19154422 intron brat + chr2L_9_19150001 chr2L_19150001 RAL-321 642 chr2L 19147368 19147399 chr2L 19154403 19154454 297 13 7051 5.0 3.5 4.2 2.5 7086 chr2L 19147368 intron brat + chr2L 19150911 intron brat + chr2L 19154454 intron brat + chr2L_13_19150001 chr2L_19150001 RAL-321 643 chr2L 19246818 19246838 chr2L 19246916 19246936 14 98 7.0 6.5 6.8 1.8 118 chr2L 19246818 intergenic not near genes chr2L 19246877 intergenic not near genes chr2L 19246936 intergenic not near genes chr2L_14_19245001 chr2L_19245001 RAL-321 644 chr2L 19345002 19345045 chr2L 19357231 19357274 blood 20 12229 5.0 9.0 7.0 2.5 12272 chr2L 19345002 intron dnt - chr2L 19351138 intron dnt - chr2L 19357274 intron dnt - chr2L_20_19350001 chr2L_19350001 RAL-321 645 chr2L 19357525 19357569 chr2L 19357635 19357679 27 110 6.5 10.0 8.2 2.9 154 chr2L 19357525 intron dnt - chr2L 19357602 intron dnt - chr2L 19357679 intron dnt - chr2L_27_19355001 chr2L_19355001 RAL-321 646 chr2L 19378734 19378788 chr2L 19378875 19378929 26 136 5.5 4.0 4.8 4.5 195 chr2L 19378734 intergenic not near genes chr2L 19378832 intergenic not near genes chr2L 19378929 intergenic not near genes chr2L_26_19375001 chr2L_19375001 RAL-321 647 chr2L 19380492 19380499 chr2L 19380592 19380599 5 99 8.5 7.0 7.8 0.6 107 chr2L 19380492 intergenic CG17350 + chr2L 19380546 intergenic CG17350 + chr2L 19380599 intergenic CG17350 + chr2L_5_19380001 chr2L_19380001 RAL-321 648 chr2L 19380500 19380529 chr2L 19380590 19380629 24 98 5.0 6.5 5.8 3.5 129 chr2L 19380500 intergenic CG17350 + chr2L 19380564 intergenic CG17350 + chr2L 19380629 intergenic CG17350 + chr2L_24_19380001 chr2L_19380001 RAL-321 649 chr2L 19441046 19441048 chr2L 19441143 19441145 5 97 8.0 8.5 8.2 0.5 99 chr2L 19441046 intron CG10237 - chr2L 19441096 intron CG10237 - chr2L 19441145 intron CG10237 - chr2L_5_19440001 chr2L_19440001 RAL-321 650 chr2L 19544607 19544617 chr2L 19544664 19544714 8 80 8.5 10.5 9.5 0.8 107 chr2L 19544607 exon ref(2)P + chr2L 19544660 exon ref(2)P + chr2L 19544714 exon ref(2)P + chr2L_8_19540001 chr2L_19540001 RAL-321 651 chr2L 19557806 19557853 chr2L 19557918 19557959 7 109 0.5 10.0 5.2 1.1 153 chr2L 19557806 intergenic Tep5 + chr2L 19557882 intergenic Tep5 + chr2L 19557959 intergenic Tep5 + chr2L_7_19555001 chr2L_19555001 RAL-321 652 chr2L 19558498 19558550 chr2L 19558620 19558674 29 124 2.5 5.5 4.0 5.8 176 chr2L 19558498 intron Tep5 + chr2L 19558586 intron Tep5 + chr2L 19558674 intron Tep5 + chr2L_29_19555001 chr2L_19555001 RAL-321 653 chr2L 19559983 19560039 chr2L 19560256 19560311 31 270 4.0 3.0 3.5 6.9 328 chr2L 19559983 exon Tep5 + chr2L 19560147 exon Tep5 + chr2L 19560311 intron Tep5 + chr2L_31_19560001 chr2L_19560001 RAL-321 654 chr2L 19560817 19560854 chr2L 19560917 19560954 18 100 14.5 1.0 7.8 2.0 137 chr2L 19560817 exon Tep5 + chr2L 19560886 exon Tep5 + chr2L 19560954 exon Tep5 + chr2L_18_19560001 chr2L_19560001 RAL-321 655 chr2L 19561320 19561367 chr2L 19561483 19561528 17 160 7.0 4.5 5.8 2.5 208 chr2L 19561320 exon Tep5 + chr2L 19561424 exon Tep5 + chr2L 19561528 exon Tep5 + chr2L_17_19560001 chr2L_19560001 RAL-321 656 chr2L 19562040 19562055 chr2L 19562145 19562160 7 104 14.5 7.0 10.8 0.6 120 chr2L 19562040 exon Tep5 + chr2L 19562100 intron Tep5 + chr2L 19562160 exon Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-321 657 chr2L 19562056 19562083 chr2L 19562140 19562187 18 103 4.5 6.0 5.2 2.9 131 chr2L 19562056 exon Tep5 + chr2L 19562122 intron Tep5 + chr2L 19562187 exon Tep5 + chr2L_18_19560001 chr2L_19560001 RAL-321 658 chr2L 19601550 19601600 chr2L 19601646 19601697 30 95 4.5 6.5 5.5 4.6 147 chr2L 19601550 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601697 intron,intron Lar +,CR44978 - chr2L_30_19600001 chr2L_19600001 RAL-321 659 chr2L 19620089 19620127 chr2L 19621085 19621115 jockey 16 1000 10.0 4.0 7.0 2.0 1026 chr2L 19620089 intron Lar + chr2L 19620602 intron Lar + chr2L 19621115 intron Lar + chr2L_16_19620001 chr2L_19620001 RAL-321 660 chr2L 19652552 19652602 chr2L 19674006 19674056 opus 15 21452 8.5 6.5 7.5 1.8 21504 chr2L 19652552 intron Lar + chr2L 19663304 intron Lar + chr2L 19674056 intron Lar + chr2L_15_19660001 chr2L_19660001 RAL-321 661 chr2L 19697120 19697165 chr2L 19697233 19697278 20 111 6.0 10.0 8.0 2.2 158 chr2L 19697120 intron Lar + chr2L 19697199 intron Lar + chr2L 19697278 intron Lar + chr2L_20_19695001 chr2L_19695001 RAL-321 662 chr2L 19703519 19703562 chr2L 19712675 19712708 roo 22 9154 13.5 1.5 7.5 2.6 9189 chr2L 19703519 intron Lar + chr2L 19708114 intron Lar + chr2L 19712708 intron Lar + chr2L_22_19705001 chr2L_19705001 RAL-321 663 chr2L 19712671 19712721 chr2L 19712773 19712825 23 94 1.0 8.0 4.5 4.2 154 chr2L 19712671 intron Lar + chr2L 19712748 intron Lar + chr2L 19712825 intron Lar + chr2L_23_19710001 chr2L_19710001 RAL-321 664 chr2L 19737361 19737385 chr2L 19740832 19740874 1360 9 3473 3.5 8.0 5.8 1.3 3513 chr2L 19737361 intergenic Nf-YB + chr2L 19739118 intergenic not near genes chr2L 19740874 intergenic not near genes chr2L_9_19735001 chr2L_19735001 RAL-321 665 chr2L 19762787 19762838 chr2L 19763049 19763100 pogo 28 262 6.0 4.5 5.2 4.5 313 chr2L 19762787 exon fbp - chr2L 19762944 intron fbp - chr2L 19763100 intron fbp - chr2L_28_19760001 chr2L_19760001 RAL-321 666 chr2L 19765140 19765148 chr2L 19765295 19765303 4 155 0.0 13.5 6.8 0.5 163 chr2L 19765140 intergenic not near genes chr2L 19765222 intergenic not near genes chr2L 19765303 intergenic bsh - chr2L_4_19765001 chr2L_19765001 RAL-321 667 chr2L 19773144 19773191 chr2L 19773251 19773298 21 107 5.0 3.0 4.0 4.2 154 chr2L 19773144 intergenic not near genes chr2L 19773221 intergenic not near genes chr2L 19773298 intergenic not near genes chr2L_21_19770001 chr2L_19770001 RAL-321 668 chr2L 19776642 19776660 chr2L 19776742 19776760 7 99 15.5 6.0 10.8 0.6 118 chr2L 19776642 3` UTR CdGAPr - chr2L 19776701 3` UTR CdGAPr - chr2L 19776760 3` UTR CdGAPr - chr2L_7_19775001 chr2L_19775001 RAL-321 669 chr2L 19824403 19824432 chr2L 19824506 19824535 18 103 4.5 6.0 5.2 2.9 132 chr2L 19824403 intron sick + chr2L 19824469 intron sick + chr2L 19824535 intron sick + chr2L_18_19820001 chr2L_19820001 RAL-321 670 chr2L 19837262 19837284 chr2L 19837362 19837384 8 99 12.0 4.0 8.0 0.9 122 chr2L 19837262 intron sick + chr2L 19837323 intron sick + chr2L 19837384 intron sick + chr2L_8_19835001 chr2L_19835001 RAL-321 671 chr2L 19837285 19837310 chr2L 19837355 19837399 14 93 6.5 3.0 4.8 2.4 114 chr2L 19837285 intron sick + chr2L 19837342 intron sick + chr2L 19837399 intron sick + chr2L_14_19835001 chr2L_19835001 RAL-321 672 chr2L 19846235 19846275 chr2L 19846336 19846376 13 101 0.0 8.0 4.0 2.6 141 chr2L 19846235 intron sick + chr2L 19846306 intron sick + chr2L 19846376 intron sick + chr2L_13_19845001 chr2L_19845001 RAL-321 673 chr2L 19901480 19901496 chr2L 19901596 19901619 6 118 12.0 7.5 9.8 0.6 139 chr2L 19901480 intron sick + chr2L 19901550 intron sick + chr2L 19901619 intron sick + chr2L_6_19900001 chr2L_19900001 RAL-321 674 chr2L 19901499 19901517 chr2L 19901595 19901640 10 120 6.5 7.5 7.0 1.2 141 chr2L 19901499 intron sick + chr2L 19901570 intron sick + chr2L 19901640 intron sick + chr2L_10_19900001 chr2L_19900001 RAL-321 675 chr2L 19911272 19911322 chr2L 19911380 19911430 17 108 4.5 7.5 6.0 2.4 158 chr2L 19911272 intron,3` UTR sick +,CR43097 - chr2L 19911351 intron,3` UTR sick +,CR43097 - chr2L 19911430 intron,3` UTR sick +,CR43097 - chr2L_17_19910001 chr2L_19910001 RAL-321 676 chr2L 19935231 19935259 chr2L 19935323 19935336 10 90 7.5 10.0 8.8 1.0 105 chr2L 19935231 intron sick + chr2L 19935284 intron sick + chr2L 19935336 intron sick + chr2L_10_19935001 chr2L_19935001 RAL-321 677 chr2L 19942184 19942237 chr2L 19942287 19942298 24 93 8.0 4.5 6.2 3.3 114 chr2L 19942184 intron sick + chr2L 19942241 intron sick + chr2L 19942298 intron sick + chr2L_24_19940001 chr2L_19940001 RAL-321 678 chr2L 19950191 19950198 chr2L 19950293 19950300 4 102 7.5 0.0 3.8 0.8 109 chr2L 19950191 intron sick + chr2L 19950246 intron sick + chr2L 19950300 intron sick + chr2L_4_19950001 chr2L_19950001 RAL-321 679 chr2L 19994640 19994687 chr2L 19994731 19994782 9 87 1.5 4.0 2.8 2.4 142 chr2L 19994640 intron CG43861 - chr2L 19994711 intron CG43861 - chr2L 19994782 intron CG43861 - chr2L_9_19990001 chr2L_19990001 RAL-321 680 chr2L 20005853 20005903 chr2L 20010949 20010994 flea 20 5095 8.0 8.5 8.2 2.2 5141 chr2L 20005853 intron CG43861 - chr2L 20008424 intron CG43861 - chr2L 20010994 intron CG43861 - chr2L_20_20005001 chr2L_20005001 RAL-321 681 chr2L 20011729 20011762 chr2L 20011832 20011865 10 103 0.0 10.5 5.2 1.6 136 chr2L 20011729 intron CG43861 - chr2L 20011797 intron CG43861 - chr2L 20011865 intron CG43861 - chr2L_10_20010001 chr2L_20010001 RAL-321 682 chr2L 20022069 20022123 chr2L 20022202 20022255 23 133 4.5 6.5 5.5 3.5 186 chr2L 20022069 intergenic not near genes chr2L 20022162 intergenic not near genes chr2L 20022255 intergenic not near genes chr2L_23_20020001 chr2L_20020001 RAL-321 683 chr2L 20069508 20069555 chr2L 20069606 20069644 25 94 8.0 10.0 9.0 2.5 136 chr2L 20069508 exon bwa + chr2L 20069576 intron bwa + chr2L 20069644 intron bwa + chr2L_25_20065001 chr2L_20065001 RAL-321 684 chr2L 20079495 20079545 chr2L 20079636 20079686 22 138 7.5 0.0 3.8 4.6 191 chr2L 20079495 intron,intron neb +,fok - chr2L 20079590 intron,intron neb +,fok - chr2L 20079686 intron,intron neb +,fok - chr2L_22_20075001 chr2L_20075001 RAL-321 685 chr2L 20124308 20124322 chr2L 20124406 20124420 6 98 14.5 6.5 10.5 0.5 112 chr2L 20124308 intergenic not near genes chr2L 20124364 intergenic not near genes chr2L 20124420 intergenic not near genes chr2L_6_20120001 chr2L_20120001 RAL-321 686 chr2L 20124335 20124360 chr2L 20124403 20124458 11 95 7.5 5.5 6.5 1.5 123 chr2L 20124335 intergenic not near genes chr2L 20124396 intergenic not near genes chr2L 20124458 intergenic not near genes chr2L_11_20120001 chr2L_20120001 RAL-321 687 chr2L 20246775 20246782 chr2L 20246846 20246889 5 88 6.5 8.5 7.5 0.6 114 chr2L 20246775 intergenic not near genes chr2L 20246832 intergenic not near genes chr2L 20246889 intergenic not near genes chr2L_5_20245001 chr2L_20245001 RAL-321 688 chr2L 20271241 20271265 chr2L 20271344 20271368 13 103 9.0 8.5 8.8 1.3 127 chr2L 20271241 intergenic not near genes chr2L 20271304 intergenic not near genes chr2L 20271368 intergenic not near genes chr2L_13_20270001 chr2L_20270001 RAL-321 689 chr2L 20272106 20272133 chr2L 20282837 20282864 copia 13 10730 8.5 10.0 9.2 1.3 10758 chr2L 20272106 intergenic not near genes chr2L 20277485 intergenic not near genes chr2L 20282864 intergenic not near genes chr2L_13_20275001 chr2L_20275001 RAL-321 690 chr2L 20272137 20272141 chr2L 20282831 20282872 copia 4 10720 7.5 9.5 8.5 0.4 10735 chr2L 20272137 intergenic not near genes chr2L 20277504 intergenic not near genes chr2L 20282872 intergenic not near genes chr2L_4_20275001 chr2L_20275001 RAL-321 691 chr2L 20296500 20296534 chr2L 20296601 20296635 13 101 4.0 6.5 5.2 2.1 135 chr2L 20296500 intergenic CR43414 - chr2L 20296568 intergenic CR43414 - chr2L 20296635 intergenic CR43414 - chr2L_13_20295001 chr2L_20295001 RAL-321 692 chr2L 20299402 20299444 chr2L 20299540 20299587 24 136 0.0 7.5 3.8 5.0 185 chr2L 20299402 intergenic not near genes chr2L 20299494 intergenic not near genes chr2L 20299587 intergenic not near genes chr2L_24_20295001 chr2L_20295001 RAL-321 693 chr2L 20299982 20300019 chr2L 20300090 20300112 5 97 5.5 4.5 5.0 0.8 130 chr2L 20299982 intergenic not near genes chr2L 20300047 intergenic not near genes chr2L 20300112 intergenic not near genes chr2L_5_20300001 chr2L_20300001 RAL-321 694 chr2L 20303164 20303184 chr2L 20310652 20310672 blood 9 7488 2.0 10.5 6.2 1.2 7508 chr2L 20303164 intergenic not near genes chr2L 20306918 intergenic not near genes chr2L 20310672 intergenic not near genes chr2L_9_20305001 chr2L_20305001 RAL-321 695 chr2L 20336054 20336099 chr2L 20336159 20336204 19 104 5.5 6.5 6.0 2.7 150 chr2L 20336054 intron spir + chr2L 20336129 intron spir + chr2L 20336204 intron spir + chr2L_19_20335001 chr2L_20335001 RAL-321 696 chr2L 20420099 20420127 chr2L 20420196 20420224 14 96 12.5 8.5 10.5 1.2 125 chr2L 20420099 intron Arpc2 + chr2L 20420162 intron Arpc2 + chr2L 20420224 intron Arpc2 + chr2L_14_20420001 chr2L_20420001 RAL-321 697 chr2L 20420128 20420147 chr2L 20420190 20420243 11 92 8.0 8.5 8.2 1.2 115 chr2L 20420128 intron Arpc2 + chr2L 20420186 intron Arpc2 + chr2L 20420243 intron Arpc2 + chr2L_11_20420001 chr2L_20420001 RAL-321 698 chr2L 20429655 20429694 chr2L 20429788 20429801 13 127 10.5 5.5 8.0 1.4 146 chr2L 20429655 intron CG31688 + chr2L 20429728 intron CG31688 + chr2L 20429801 intron CG31688 + chr2L_13_20425001 chr2L_20425001 RAL-321 699 chr2L 20480530 20480544 chr2L 20480673 20480676 5 141 7.5 7.0 7.2 0.6 146 chr2L 20480530 intron CR44980 - chr2L 20480603 intron CR44980 - chr2L 20480676 intron CR44980 - chr2L_5_20480001 chr2L_20480001 RAL-321 700 chr2L 20498672 20498704 chr2L 20498791 20498823 18 119 9.5 8.0 8.8 1.8 151 chr2L 20498672 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498823 intergenic not near genes chr2L_18_20495001 chr2L_20495001 RAL-321 701 chr2L 20513579 20513606 chr2L 20513691 20513718 7 112 6.0 7.0 6.5 0.9 139 chr2L 20513579 intergenic CR45702 + chr2L 20513648 intergenic CR45702 + chr2L 20513718 intergenic CR45702 + chr2L_7_20510001 chr2L_20510001 RAL-321 702 chr2L 20524170 20524194 chr2L 20524272 20524295 7 102 10.0 0.0 5.0 1.2 125 chr2L 20524170 intergenic not near genes chr2L 20524232 intergenic not near genes chr2L 20524295 intergenic not near genes chr2L_7_20520001 chr2L_20520001 RAL-321 703 chr2L 20530752 20530800 chr2L 20530910 20530954 19 151 6.0 8.0 7.0 2.4 202 chr2L 20530752 intergenic CG44270 + chr2L 20530853 intergenic CG44270 + chr2L 20530954 intergenic CG44270 + chr2L_19_20530001 chr2L_20530001 RAL-321 704 chr2L 20568640 20568687 chr2L 20569050 20569097 X-element 24 410 3.0 3.5 3.2 5.7 457 chr2L 20568640 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569097 intron CR45347 + chr2L_24_20565001 chr2L_20565001 RAL-321 705 chr2L 20576213 20576248 chr2L 20583686 20583736 blood 14 7484 7.5 10.0 8.8 1.4 7523 chr2L 20576213 intergenic CR45347 + chr2L 20579974 intergenic not near genes chr2L 20583736 3` UTR CR44909 - chr2L_14_20575001 chr2L_20575001 RAL-321 706 chr2L 20611208 20611260 chr2L 20611320 20611343 12 106 0.0 1.5 0.8 6.7 135 chr2L 20611208 intron CR44909 - chr2L 20611276 intron CR44909 - chr2L 20611343 intron CR44909 - chr2L_12_20610001 chr2L_20610001 RAL-321 707 chr2L 20643323 20643339 chr2L 20643475 20643491 12 152 5.0 10.5 7.8 1.4 168 chr2L 20643323 intergenic phr6-4 -,CG17470 - chr2L 20643407 3` UTR phr6-4 - chr2L 20643491 3` UTR phr6-4 - chr2L_12_20640001 chr2L_20640001 RAL-321 708 chr2L 20674812 20674860 chr2L 20674917 20674958 8 99 7.5 0.0 3.8 1.7 146 chr2L 20674812 intron CG31678 - chr2L 20674885 intron CG31678 - chr2L 20674958 intron CG31678 - chr2L_8_20670001 chr2L_20670001 RAL-321 709 chr2L 20818492 20818541 chr2L 20818593 20818643 9 101 3.0 7.5 5.2 1.5 151 chr2L 20818492 exon CheB38a - chr2L 20818568 intergenic CheB38a - chr2L 20818643 intergenic CheB38a - chr2L_9_20815001 chr2L_20815001 RAL-321 710 chr2L 20835793 20835839 chr2L 20836530 20836576 Quasimodo 18 735 6.0 5.5 5.8 2.6 783 chr2L 20835793 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836576 intergenic Spn38F - chr2L_18_20835001 chr2L_20835001 RAL-321 711 chr2L 20891538 20891545 chr2L 20896640 20896666 jockey 6 5118 4.5 3.5 4.0 1.2 5128 chr2L 20891538 intron,intron CG43739 -,sky - chr2L 20894102 intron,intron CG43739 -,sky - chr2L 20896666 intron,intron CG43739 -,sky - chr2L_6_20890001 chr2L_20890001 RAL-321 712 chr2L 20901434 20901476 chr2L 20902618 20902660 1360 4 1184 4.0 4.0 4.0 0.8 1226 chr2L 20901434 intron,intron CG43739 -,sky - chr2L 20902047 intron,intron CG43739 -,sky - chr2L 20902660 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-321 713 chr2L 20946924 20946956 chr2L 20947031 20947063 18 105 5.5 4.5 5.0 3.0 139 chr2L 20946924 intergenic CR44606 - chr2L 20946994 intergenic CR44606 - chr2L 20947063 intergenic CR44606 - chr2L_18_20945001 chr2L_20945001 RAL-321 714 chr2L 20967061 20967107 chr2L 20967167 20967213 23 106 1.5 2.5 2.0 7.7 152 chr2L 20967061 3` UTR CG42238 - chr2L 20967137 3` UTR CG42238 - chr2L 20967213 3` UTR CG42238 - chr2L_23_20965001 chr2L_20965001 RAL-321 715 chr2L 20976635 20976676 chr2L 20981470 20981511 X-element 11 4834 6.5 6.5 6.5 1.5 4876 chr2L 20976635 intron CG42238 - chr2L 20979073 intron CG42238 - chr2L 20981511 intron CG42238 - chr2L_11_20975001 chr2L_20975001 RAL-321 716 chr2L 20984717 20984769 chr2L 20984829 20984881 26 109 8.5 6.5 7.5 3.1 164 chr2L 20984717 intron CG42238 - chr2L 20984799 intron CG42238 - chr2L 20984881 intron CG42238 - chr2L_26_20980001 chr2L_20980001 RAL-321 717 chr2L 20986885 20986934 chr2L 20987242 20987291 10 357 6.0 5.0 5.5 1.5 406 chr2L 20986885 intron CG42238 - chr2L 20987088 intron CG42238 - chr2L 20987291 intron CG42238 - chr2L_10_20985001 chr2L_20985001 RAL-321 718 chr2L 20991018 20991068 chr2L 20991116 20991166 23 97 4.5 8.0 6.2 3.2 148 chr2L 20991018 intron CG42238 - chr2L 20991092 intron CG42238 - chr2L 20991166 intron CG42238 - chr2L_23_20990001 chr2L_20990001 RAL-321 719 chr2L 21019316 21019357 chr2L 21019457 21019498 17 140 4.5 2.0 3.2 4.0 182 chr2L 21019316 intron CG42238 - chr2L 21019407 intron CG42238 - chr2L 21019498 intron CG42238 - chr2L_17_21015001 chr2L_21015001 RAL-321 720 chr2L 21020256 21020295 chr2L 21023953 21023992 NOF 15 3697 11.0 6.0 8.5 1.6 3736 chr2L 21020256 intron CG42238 - chr2L 21022124 intron CG42238 - chr2L 21023992 intron CG42238 - chr2L_15_21020001 chr2L_21020001 RAL-321 721 chr2L 21041121 21041166 chr2L 21049402 21049431 Tirant 24 8275 8.5 9.5 9.0 2.4 8310 chr2L 21041121 intron CG42238 - chr2L 21045276 intron CG42238 - chr2L 21049431 intron CG42238 - chr2L_24_21045001 chr2L_21045001 RAL-321 722 chr2L 21093444 21093459 chr2L 21093562 21093578 7 117 13.5 15.5 14.5 0.5 134 chr2L 21093444 intron CG14397 + chr2L 21093511 intron CG14397 + chr2L 21093578 intron CG14397 + chr2L_7_21090001 chr2L_21090001 RAL-321 723 chr2L 21093462 21093479 chr2L 21093552 21093598 7 110 8.5 13.0 10.8 0.6 136 chr2L 21093462 intron CG14397 + chr2L 21093530 intron CG14397 + chr2L 21093598 intron CG14397 + chr2L_7_21090001 chr2L_21090001 RAL-321 724 chr2L 21158859 21158907 chr2L 21158956 21159004 21 96 7.5 10.0 8.8 2.1 145 chr2L 21158859 intergenic CG9248 +,CG9249 - chr2L 21158932 5` UTR CG9248 + chr2L 21159004 5` UTR CG9248 + chr2L_21_21155001 chr2L_21155001 RAL-321 725 chr2L 21245260 21245301 chr2L 21245521 21245534 17 254 2.0 10.0 6.0 2.4 274 chr2L 21245260 intron Hr39 + chr2L 21245397 intron Hr39 + chr2L 21245534 intron Hr39 + chr2L_17_21245001 chr2L_21245001 RAL-321 726 chr2L 21286585 21286624 chr2L 21286683 21286722 20 98 8.0 3.5 5.8 2.9 137 chr2L 21286585 exon Mio - chr2L 21286654 intron Mio - chr2L 21286722 intron Mio - chr2L_20_21285001 chr2L_21285001 RAL-321 727 chr2L 21347532 21347574 chr2L 21355024 21355066 blood 8 7491 9.0 6.5 7.8 0.9 7534 chr2L 21347532 intron Tsp39D + chr2L 21351299 intron Tsp39D + chr2L 21355066 intron Tsp39D + chr2L_8_21350001 chr2L_21350001 RAL-321 728 chr2L 21355587 21355638 chr2L 21355752 21355803 18 165 6.0 5.5 5.8 2.6 216 chr2L 21355587 exon Tsp39D + chr2L 21355695 intron Tsp39D + chr2L 21355803 intron Tsp39D + chr2L_18_21355001 chr2L_21355001 RAL-321 729 chr2L 21597026 21597062 chr2L 21604789 21604818 roo 16 7762 7.0 9.0 8.0 1.8 7792 chr2L 21597026 intergenic not near genes chr2L 21600922 intergenic not near genes chr2L 21604818 intergenic not near genes chr2L_16_21600001 chr2L_21600001 RAL-321 730 chr2L 21605920 21605968 chr2L 21606032 21606070 17 111 5.5 4.0 4.8 2.9 150 chr2L 21605920 intergenic not near genes chr2L 21605995 intergenic not near genes chr2L 21606070 intergenic not near genes chr2L_17_21605001 chr2L_21605001 RAL-321 731 chr2L 21667492 21667538 chr2L 21667718 21667738 25 224 4.0 4.0 4.0 5.0 246 chr2L 21667492 intron CG2225 - chr2L 21667615 intron CG2225 - chr2L 21667738 intron CG2225 - chr2L_25_21665001 chr2L_21665001 RAL-321 732 chr2L 21691807 21691847 chr2L 21698297 21698329 Burdock 12 6489 8.5 2.0 5.2 1.9 6522 chr2L 21691807 intron CG31619 + chr2L 21695068 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_12_21695001 chr2L_21695001 RAL-321 733 chr2L 21757555 21757595 chr2L 21757656 21757696 20 101 3.5 8.5 6.0 2.9 141 chr2L 21757555 intergenic step -,CG1416 + chr2L 21757626 intergenic step -,CG1416 + chr2L 21757696 intergenic step -,CG1416 + chr2L_20_21755001 chr2L_21755001 RAL-321 734 chr2L 21806206 21806258 chr2L 21806329 21806381 16 121 7.5 5.5 6.5 2.1 175 chr2L 21806206 intergenic not near genes chr2L 21806294 intergenic not near genes chr2L 21806381 intergenic not near genes chr2L_16_21805001 chr2L_21805001 RAL-321 735 chr2L 21852361 21852401 chr2L 21852696 21852736 11 335 7.0 5.0 6.0 1.6 375 chr2L 21852361 intergenic not near genes chr2L 21852548 intergenic not near genes chr2L 21852736 intergenic not near genes chr2L_11_21850001 chr2L_21850001 RAL-321 736 chr2L 21855460 21855513 chr2L 21855566 21855620 21 105 4.0 6.0 5.0 3.5 160 chr2L 21855460 intron CR44917 + chr2L 21855540 intron CR44917 + chr2L 21855620 intron CR44917 + chr2L_21_21855001 chr2L_21855001 RAL-321 737 chr2L 21859297 21859351 chr2L 21859397 21859451 23 99 6.0 3.5 4.8 4.0 154 chr2L 21859297 intron CR44917 + chr2L 21859374 intron CR44917 + chr2L 21859451 intron CR44917 + chr2L_23_21855001 chr2L_21855001 RAL-321 738 chr2L 21903282 21903330 chr2L 21903423 21903476 23 141 6.0 2.0 4.0 4.6 194 chr2L 21903282 exon CG1421 + chr2L 21903379 exon CG1421 + chr2L 21903476 exon CG1421 + chr2L_23_21900001 chr2L_21900001 RAL-321 739 chr2L 21981677 21981711 chr2L 21990862 21990896 roo 14 9185 7.5 9.5 8.5 1.5 9219 chr2L 21981677 exon CG2528 - chr2L 21986286 intron CG2528 - chr2L 21990896 exon CG2528 - chr2L_14_21985001 chr2L_21985001 RAL-321 740 chr2L 22001627 22001675 chr2L 22001723 22001771 19 96 3.0 6.5 4.8 3.3 144 chr2L 22001627 intergenic not near genes chr2L 22001699 intergenic not near genes chr2L 22001771 intergenic not near genes chr2L_19_22000001 chr2L_22000001 RAL-321 741 chr2L 22007913 22007951 chr2L 22008015 22008053 7 102 4.5 4.0 4.2 1.3 140 chr2L 22007913 intergenic not near genes chr2L 22007983 intergenic not near genes chr2L 22008053 intergenic not near genes chr2L_7_22005001 chr2L_22005001 RAL-321 742 chr2L 22025822 22025832 chr2L 22025919 22025931 6 98 10.0 8.0 9.0 0.6 109 chr2L 22025822 intergenic tio + chr2L 22025876 intergenic tio + chr2L 22025931 intergenic tio + chr2L_6_22025001 chr2L_22025001 RAL-321 743 chr2L 22025834 22025854 chr2L 22025907 22025953 7 91 4.5 7.0 5.8 1.0 119 chr2L 22025834 intergenic tio + chr2L 22025894 intergenic tio + chr2L 22025953 intergenic tio + chr2L_7_22025001 chr2L_22025001 RAL-321 744 chr2L 22035186 22035237 chr2L 22035283 22035334 24 96 6.0 4.5 5.2 3.9 148 chr2L 22035186 intergenic not near genes chr2L 22035260 intergenic not near genes chr2L 22035334 intergenic not near genes chr2L_24_22035001 chr2L_22035001 RAL-321 745 chr2L 22047234 22047254 chr2L 22047379 22047399 8 145 4.0 10.5 7.2 1.0 165 chr2L 22047234 intergenic not near genes chr2L 22047316 intergenic not near genes chr2L 22047399 intergenic not near genes chr2L_8_22045001 chr2L_22045001 RAL-321 746 chr2L 22090599 22090645 chr2L 22090697 22090743 10 98 10.5 8.0 9.2 1.0 144 chr2L 22090599 intergenic not near genes chr2L 22090671 intergenic not near genes chr2L 22090743 intergenic not near genes chr2L_10_22090001 chr2L_22090001 RAL-321 747 chr2L 2374349 2374352 chr2L 22133311 22133314 4 19758962 13.0 26.0 19.5 0.2 19758965 chr2L 2374349 intron CG3609 - chr2L 12253832 intron aret + chr2L 22133314 intergenic not near genes chr2L_4_12250001 chr2L_12250001 RAL-321 748 chr2L 22179520 22179566 chr2L 22179617 22179647 21 96 6.5 6.0 6.2 2.9 127 chr2L 22179520 intron CG3635 + chr2L 22179584 intron CG3635 + chr2L 22179647 intron CG3635 + chr2L_21_22175001 chr2L_22175001 RAL-321 749 chr2L 22192003 22192058 chr2L 22192112 22192167 33 105 7.5 5.5 6.5 4.4 164 chr2L 22192003 intron Ir40a - chr2L 22192085 intron Ir40a - chr2L 22192167 intron Ir40a - chr2L_33_22190001 chr2L_22190001 RAL-321 750 chr2L 22258603 22258648 chr2L 22260750 22260795 G6 20 2147 4.0 6.5 5.2 3.2 2192 chr2L 22258603 intergenic Tif-IA + chr2L 22259699 intergenic not near genes chr2L 22260795 intergenic not near genes chr2L_20_22255001 chr2L_22255001 RAL-321 751 chr2L 22319140 22319190 chr2L 22319283 22319324 22 141 2.5 4.5 3.5 4.9 184 chr2L 22319140 intron CG17018 + chr2L 22319232 intron CG17018 + chr2L 22319324 intron CG17018 + chr2L_22_22315001 chr2L_22315001 RAL-321 752 chr2L 22325284 22325335 chr2L 22325378 22325432 14 94 4.5 4.5 4.5 2.5 148 chr2L 22325284 intron CG17018 + chr2L 22325358 intron CG17018 + chr2L 22325432 intron CG17018 + chr2L_14_22325001 chr2L_22325001 RAL-321 753 chr2L 22339789 22339808 chr2L 22339930 22339979 7 157 5.0 6.0 5.5 1.1 190 chr2L 22339789 intron CG17018 + chr2L 22339884 intron CG17018 + chr2L 22339979 intron CG17018 + chr2L_7_22335001 chr2L_22335001 RAL-321 754 chr2L 22581955 22581991 chr2L 22583759 22583800 S-element 22 1809 7.5 9.0 8.2 2.4 1845 chr2L 22581955 intron CG17494 + chr2L 22582878 intron CG17494 + chr2L 22583800 intron CG17494 + chr2L_22_22580001 chr2L_22580001 RAL-321 755 chr2L 22679804 22679820 chr2L 22684581 22684609 F-element 9 4790 8.5 6.5 7.5 1.1 4805 chr2L 22679804 intron CG40006 - chr2L 22682206 intron CG40006 - chr2L 22684609 intron CG40006 - chr2L_9_22680001 chr2L_22680001 RAL-321 756 chr2L 22776400 22776451 chr2L 22778209 22778260 S-element 25 1807 4.0 5.0 4.5 4.5 1860 chr2L 22776400 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778260 intergenic not near genes chr2L_25_22775001 chr2L_22775001 RAL-321 757 chr2L 23169695 23169745 chr2L 23169934 23169976 16 237 5.5 4.0 4.8 2.8 281 chr2L 23169695 intron CG12567 - chr2L 23169836 intron CG12567 - chr2L 23169976 intron CG12567 - chr2L_16_23165001 chr2L_23165001 RAL-321 758 chr2R 469952 469976 chr2R 473201 473233 F-element 6 3251 4.5 3.5 4.0 1.2 3281 chr2R 469952 intergenic not near genes chr2R 471592 intergenic not near genes chr2R 473233 intergenic not near genes chr2R_6_470001 chr2R_470001 RAL-321 759 chr2R 529318 529354 chr2R 537963 537999 Max-element 6 8645 1.5 5.0 3.2 1.4 8681 chr2R 529318 intron CG40378 + chr2R 533658 intron CG40378 + chr2R 537999 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-321 760 chr2R 552741 552783 chr2R 553970 553988 1360 5 1218 5.0 1.0 3.0 1.2 1247 chr2R 552741 intron CG40378 + chr2R 553364 intron CG40378 + chr2R 553988 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-321 761 chr2R 1090265 1090280 chr2R 1090379 1090394 7 112 9.5 5.5 7.5 0.8 129 chr2R 1090265 intron rl + chr2R 1090330 intron rl + chr2R 1090394 intron rl + chr2R_7_1090001 chr2R_1090001 RAL-321 762 chr2R 1317820 1317830 chr2R 1318149 1318159 5 329 40.0 37.5 38.8 0.1 339 chr2R 1317820 intergenic not near genes chr2R 1317990 intergenic not near genes chr2R 1318159 intergenic not near genes chr2R_5_1315001 chr2R_1315001 RAL-321 763 chr2R 1317837 1317868 chr2R 1318146 1318187 18 322 31.5 35.5 33.5 0.5 350 chr2R 1317837 intergenic not near genes chr2R 1318012 intergenic not near genes chr2R 1318187 intergenic not near genes chr2R_18_1315001 chr2R_1315001 RAL-321 764 chr2R 1365844 1365895 chr2R 1365976 1366027 19 130 3.5 5.0 4.2 3.7 183 chr2R 1365844 intron l(2)41Ab + chr2R 1365936 intron l(2)41Ab + chr2R 1366027 intron l(2)41Ab + chr2R_19_1365001 chr2R_1365001 RAL-321 765 chr2R 1516585 1516602 chr2R 1521333 1521350 1731 12 4748 26.0 10.0 18.0 0.6 4765 chr2R 1516585 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521350 5` UTR Maf1 - chr2R_12_1515001 chr2R_1515001 RAL-321 766 chr2R 1755925 1755970 chr2R 1756059 1756104 13 134 7.0 4.0 5.5 2.0 179 chr2R 1755925 intron CG41520 + chr2R 1756014 intron CG41520 + chr2R 1756104 intron CG41520 + chr2R_13_1755001 chr2R_1755001 RAL-321 767 chr2R 2015123 2015165 chr2R 2015220 2015262 15 96 7.5 8.0 7.8 1.7 139 chr2R 2015123 intron CG17684 - chr2R 2015192 intron CG17684 - chr2R 2015262 intron CG17684 - chr2R_15_2015001 chr2R_2015001 RAL-321 768 chr2R 2044679 2044692 chr2R 2045495 2045509 5 816 6.5 12.0 9.2 0.5 830 chr2R 2044679 intron CG17684 - chr2R 2045094 intron CG17684 - chr2R 2045509 intron CG17684 - chr2R_5_2045001 chr2R_2045001 RAL-321 769 chr2R 2110485 2110497 chr2R 2118063 2118074 17.6 6 7578 8.0 4.0 6.0 0.9 7589 chr2R 2110485 intron CG17684 - chr2R 2114280 intron CG17684 - chr2R 2118074 intron CG17684 - chr2R_6_2110001 chr2R_2110001 RAL-321 770 chr2R 2498967 2499018 chr2R 2508134 2508175 roo 20 9166 6.5 9.0 7.8 2.3 9208 chr2R 2498967 intron MFS17 - chr2R 2503571 intron MFS17 - chr2R 2508175 intron MFS17 - chr2R_20_2500001 chr2R_2500001 RAL-321 771 chr2R 2508288 2508337 chr2R 2508446 2508485 19 157 2.5 5.0 3.8 4.0 197 chr2R 2508288 intron MFS17 - chr2R 2508386 intron MFS17 - chr2R 2508485 intron MFS17 - chr2R_19_2505001 chr2R_2505001 RAL-321 772 chr2R 1373048 1373068 chr2R 2589326 2589346 Cr1a 5 1216278 26.5 28.0 27.2 0.2 1216298 chr2R 1373048 intron l(2)41Ab + chr2R 1981197 intron CG17684 - chr2R 2589346 intergenic not near genes chr2R_5_1980001 chr2R_1980001 RAL-321 773 chr2R 2875363 2875381 chr2R 2878897 2878916 HMS-Beagle 5 3534 3.0 6.0 4.5 0.9 3553 chr2R 2875363 intergenic not near genes chr2R 2877140 intergenic not near genes chr2R 2878916 intergenic not near genes chr2R_5_2875001 chr2R_2875001 RAL-321 774 chr2R 3144067 3144105 chr2R 3393365 3393403 Doc 9 249294 25.0 8.0 16.5 0.5 249336 chr2R 3144067 intron CG42596 + chr2R 3268735 intergenic not near genes chr2R 3393403 intergenic not near genes chr2R_9_3265001 chr2R_3265001 RAL-321 775 chr2R 3291924 3292102 chr2R 3915113 3915283 5 623187 19.0 30.5 24.8 0.2 623359 chr2R 3291924 intergenic not near genes chr2R 3603604 intergenic not near genes chr2R 3915283 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-321 776 chr2R 3293738 3293762 chr2R 3293823 3293835 7 88 4.0 8.5 6.2 1.0 97 chr2R 3293738 intergenic not near genes chr2R 3293786 intergenic not near genes chr2R 3293835 intergenic not near genes chr2R_7_3290001 chr2R_3290001 RAL-321 777 chr2R 3515261 3515310 chr2R 3515369 3515418 13 108 27.0 29.5 28.2 0.4 157 chr2R 3515261 intergenic not near genes chr2R 3515340 intergenic not near genes chr2R 3515418 intergenic not near genes chr2R_13_3515001 chr2R_3515001 RAL-321 778 chr2R 3532602 3532643 chr2R 3536065 3536106 Doc 5 3463 3.5 4.0 3.8 1.0 3504 chr2R 3532602 intergenic not near genes chr2R 3534354 intergenic not near genes chr2R 3536106 intergenic not near genes chr2R_5_3530001 chr2R_3530001 RAL-321 779 chr2R 4312935 4312987 chr2R 4313039 4313091 21 102 7.0 5.0 6.0 3.0 156 chr2R 4312935 intergenic not near genes chr2R 4313013 intergenic not near genes chr2R 4313091 intergenic not near genes chr2R_21_4310001 chr2R_4310001 RAL-321 780 chr2R 4621298 4621343 chr2R 4621858 4621898 25 559 7.0 8.5 7.8 2.8 600 chr2R 4621298 3` UTR CR44101 - chr2R 4621598 3` UTR CR44101 - chr2R 4621898 3` UTR CR44101 - chr2R_25_4620001 chr2R_4620001 RAL-321 781 chr2R 4622931 4622957 chr2R 4624110 4624129 1360 7 1175 10.5 6.0 8.2 0.8 1198 chr2R 4622931 intergenic CR44101 - chr2R 4623530 intergenic not near genes chr2R 4624129 intergenic not near genes chr2R_7_4620001 chr2R_4620001 RAL-321 782 chr2R 4622960 4622982 chr2R 4624109 4624161 1360 15 1175 5.5 6.0 5.8 2.2 1201 chr2R 4622960 intergenic CR44101 - chr2R 4623560 intergenic not near genes chr2R 4624161 intergenic not near genes chr2R_15_4620001 chr2R_4620001 RAL-321 783 chr2R 4634631 4634654 chr2R 4634731 4634739 11 99 11.5 12.0 11.8 0.9 108 chr2R 4634631 intergenic not near genes chr2R 4634685 intergenic not near genes chr2R 4634739 intergenic not near genes chr2R_11_4630001 chr2R_4630001 RAL-321 784 chr2R 4750325 4750376 chr2R 4751502 4751553 1360 20 1172 5.5 2.5 4.0 4.0 1228 chr2R 4750325 intron conu + chr2R 4750939 intron conu + chr2R 4751553 intron conu + chr2R_20_4750001 chr2R_4750001 RAL-321 785 chr2R 4924456 4924463 chr2R 4924607 4924614 7 151 9.0 4.0 6.5 0.9 158 chr2R 4924456 intron Ir41a + chr2R 4924535 intron Ir41a + chr2R 4924614 intron Ir41a + chr2R_7_4920001 chr2R_4920001 RAL-321 786 chr2R 4942071 4942086 chr2R 4942196 4942202 5 135 6.5 4.0 5.2 0.8 131 chr2R 4942071 intron Ir41a + chr2R 4942136 intron Ir41a + chr2R 4942202 intron Ir41a + chr2R_5_4940001 chr2R_4940001 RAL-321 787 chr2R 4957004 4957032 chr2R 4957127 4957155 13 122 7.0 3.5 5.2 2.1 151 chr2R 4957004 intron Ir41a + chr2R 4957080 intron Ir41a + chr2R 4957155 intron Ir41a + chr2R_13_4955001 chr2R_4955001 RAL-321 788 chr2R 4957034 4957048 chr2R 4957122 4957171 7 115 3.5 3.0 3.2 1.7 137 chr2R 4957034 intron Ir41a + chr2R 4957102 intron Ir41a + chr2R 4957171 intron Ir41a + chr2R_7_4955001 chr2R_4955001 RAL-321 789 chr2R 4996333 4996340 chr2R 4996481 4996487 7 148 6.0 16.5 11.2 0.6 154 chr2R 4996333 intron Ir41a + chr2R 4996410 intron Ir41a + chr2R 4996487 intron Ir41a + chr2R_7_4995001 chr2R_4995001 RAL-321 790 chr2R 5008875 5008895 chr2R 5009964 5009984 8 1089 0.0 16.0 8.0 0.9 1109 chr2R 5008875 intron Ir41a + chr2R 5009430 intron Ir41a + chr2R 5009984 intron Ir41a + chr2R_8_5005001 chr2R_5005001 RAL-321 791 chr2R 5075927 5075967 chr2R 5076069 5076124 17 143 42.5 51.5 47.0 0.4 197 chr2R 5075927 intergenic not near genes chr2R 5076026 intergenic not near genes chr2R 5076124 intergenic not near genes chr2R_17_5075001 chr2R_5075001 RAL-321 792 chr2R 5125227 5125271 chr2R 5125565 5125609 8 336 5.0 4.0 4.5 1.5 382 chr2R 5125227 intron gus - chr2R 5125418 intron gus - chr2R 5125609 intron gus - chr2R_8_5125001 chr2R_5125001 RAL-321 793 chr2R 5237332 5237366 chr2R 5237434 5237468 13 100 5.0 0.5 2.8 3.4 136 chr2R 5237332 intron Nipped-A - chr2R 5237400 intron Nipped-A - chr2R 5237468 intron Nipped-A - chr2R_13_5235001 chr2R_5235001 RAL-321 794 chr2R 5303472 5303521 chr2R 5303580 5303629 21 107 3.5 9.0 6.2 2.9 157 chr2R 5303472 intergenic not near genes chr2R 5303550 intergenic not near genes chr2R 5303629 intergenic not near genes chr2R_21_5300001 chr2R_5300001 RAL-321 795 chr2R 5417975 5418027 chr2R 5420627 5420679 Burdock 24 2651 8.5 6.5 7.5 2.8 2704 chr2R 5417975 intron laccase2 + chr2R 5419327 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_24_5415001 chr2R_5415001 RAL-321 796 chr2R 5455753 5455803 chr2R 5455851 5455901 17 98 4.5 5.0 4.8 2.9 148 chr2R 5455753 3` UTR laccase2 + chr2R 5455827 3` UTR laccase2 + chr2R 5455901 3` UTR laccase2 + chr2R_17_5455001 chr2R_5455001 RAL-321 797 chr2R 5472344 5472389 chr2R 5472459 5472503 10 113 7.5 4.5 6.0 1.4 159 chr2R 5472344 intron CG30440 - chr2R 5472424 intron CG30440 - chr2R 5472503 intron CG30440 - chr2R_10_5470001 chr2R_5470001 RAL-321 798 chr2R 5509505 5509549 chr2R 5509621 5509665 25 116 2.0 5.0 3.5 5.6 160 chr2R 5509505 intron CG30438 + chr2R 5509585 intron CG30438 + chr2R 5509665 intron CG30438 + chr2R_25_5505001 chr2R_5505001 RAL-321 799 chr2R 5603172 5603216 chr2R 5603274 5603318 24 102 5.5 8.5 7.0 3.0 146 chr2R 5603172 intergenic Fis1 - chr2R 5603245 intergenic Fis1 - chr2R 5603318 intergenic Fis1 - chr2R_24_5600001 chr2R_5600001 RAL-321 800 chr2R 5750430 5750452 chr2R 5750542 5750564 15 111 12.5 6.0 9.2 1.5 134 chr2R 5750430 intergenic not near genes chr2R 5750497 intergenic not near genes chr2R 5750564 intergenic not near genes chr2R_15_5750001 chr2R_5750001 RAL-321 801 chr2R 5774270 5774282 chr2R 5774544 5774554 6 274 12.0 8.0 10.0 0.5 284 chr2R 5774270 3` UTR Gp210 + chr2R 5774412 intergenic Gp210 +,ZnT41F - chr2R 5774554 intergenic ZnT41F -,Gp210 + chr2R_6_5770001 chr2R_5770001 RAL-321 802 chr2R 5774283 5774304 chr2R 5774541 5774578 11 272 6.5 7.5 7.0 1.4 295 chr2R 5774283 3` UTR Gp210 + chr2R 5774430 intergenic Gp210 +,ZnT41F - chr2R 5774578 intergenic ZnT41F -,Gp210 + chr2R_11_5770001 chr2R_5770001 RAL-321 803 chr2R 5790449 5790496 chr2R 5790549 5790586 17 104 6.5 5.5 6.0 2.4 137 chr2R 5790449 intergenic not near genes chr2R 5790518 intergenic not near genes chr2R 5790586 intergenic not near genes chr2R_17_5790001 chr2R_5790001 RAL-321 804 chr2R 5794212 5794264 chr2R 5794360 5794412 30 147 5.5 8.0 6.8 3.8 200 chr2R 5794212 intergenic not near genes chr2R 5794312 intergenic not near genes chr2R 5794412 intergenic not near genes chr2R_30_5790001 chr2R_5790001 RAL-321 805 chr2R 5861271 5861319 chr2R 5861409 5861460 14 134 7.0 7.5 7.2 1.7 189 chr2R 5861271 intergenic dpr12 + chr2R 5861366 intergenic not near genes chr2R 5861460 intergenic not near genes chr2R_14_5860001 chr2R_5860001 RAL-321 806 chr2R 5869255 5869309 chr2R 5874351 5874385 flea 21 5094 9.0 8.5 8.8 2.1 5130 chr2R 5869255 intergenic not near genes chr2R 5871820 intergenic not near genes chr2R 5874385 intergenic not near genes chr2R_21_5870001 chr2R_5870001 RAL-321 807 chr2R 5878905 5878957 chr2R 5879005 5879057 16 99 9.5 6.0 7.8 1.8 152 chr2R 5878905 intergenic CG44438 - chr2R 5878981 intergenic CG44438 - chr2R 5879057 intergenic CG44438 - chr2R_16_5875001 chr2R_5875001 RAL-321 808 chr2R 5885349 5885378 chr2R 5885498 5885527 13 149 7.0 6.5 6.8 1.7 178 chr2R 5885349 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885527 5` UTR CR44125 + chr2R_13_5885001 chr2R_5885001 RAL-321 809 chr2R 5902138 5902190 chr2R 5909717 5909769 17.6 6 7578 7.0 5.0 6.0 0.9 7631 chr2R 5902138 intron CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909769 intron CG43366 + chr2R_6_5905001 chr2R_5905001 RAL-321 810 chr2R 5947050 5947082 chr2R 5947191 5947223 16 141 5.0 6.0 5.5 2.5 173 chr2R 5947050 intergenic not near genes chr2R 5947136 intergenic not near genes chr2R 5947223 intergenic not near genes chr2R_16_5945001 chr2R_5945001 RAL-321 811 chr2R 6016769 6016818 chr2R 6016873 6016922 23 104 5.0 5.5 5.2 3.7 153 chr2R 6016769 intergenic not near genes chr2R 6016846 intergenic not near genes chr2R 6016922 intergenic not near genes chr2R_23_6015001 chr2R_6015001 RAL-321 812 chr2R 6050287 6050300 chr2R 6050400 6050407 5 112 15.5 0.0 7.8 0.6 120 chr2R 6050287 intergenic CG34212 - chr2R 6050347 intergenic CG34212 - chr2R 6050407 intergenic CG34212 - chr2R_5_6050001 chr2R_6050001 RAL-321 813 chr2R 6088351 6088386 chr2R 6088464 6088499 18 112 8.5 5.0 6.8 2.3 148 chr2R 6088351 intergenic not near genes chr2R 6088425 intergenic not near genes chr2R 6088499 intergenic not near genes chr2R_18_6085001 chr2R_6085001 RAL-321 814 chr2R 6096710 6096750 chr2R 6101918 6101951 BS 6 5198 7.0 9.5 8.2 0.7 5241 chr2R 6096710 intron EcR - chr2R 6099330 intron EcR - chr2R 6101951 intron EcR - chr2R_6_6095001 chr2R_6095001 RAL-321 815 chr2R 6126926 6126964 chr2R 6127049 6127092 22 125 6.0 7.5 6.8 2.8 166 chr2R 6126926 intron EcR - chr2R 6127009 intron EcR - chr2R 6127092 intron EcR - chr2R_22_6125001 chr2R_6125001 RAL-321 816 chr2R 6168179 6168223 chr2R 6168281 6168325 21 101 8.5 2.5 5.5 3.2 146 chr2R 6168179 intron EcR - chr2R 6168252 intron EcR - chr2R 6168325 intron EcR - chr2R_21_6165001 chr2R_6165001 RAL-321 817 chr2R 6178100 6178144 chr2R 6178246 6178290 21 145 3.5 8.0 5.8 3.1 190 chr2R 6178100 intergenic not near genes chr2R 6178195 intergenic not near genes chr2R 6178290 intergenic not near genes chr2R_21_6175001 chr2R_6175001 RAL-321 818 chr2R 6494507 6494549 chr2R 6499289 6499331 F-element 14 4781 4.5 5.5 5.0 2.3 4824 chr2R 6494507 intergenic not near genes chr2R 6496919 intergenic not near genes chr2R 6499331 intergenic not near genes chr2R_14_6495001 chr2R_6495001 RAL-321 819 chr2R 6530523 6530570 chr2R 6530676 6530723 24 153 4.5 7.0 5.8 3.5 200 chr2R 6530523 intron jing + chr2R 6530623 intron jing + chr2R 6530723 intron jing + chr2R_24_6530001 chr2R_6530001 RAL-321 820 chr2R 6538358 6538405 chr2R 6538456 6538501 16 98 6.0 8.0 7.0 2.0 143 chr2R 6538358 intron jing + chr2R 6538430 intron jing + chr2R 6538501 intron jing + chr2R_16_6535001 chr2R_6535001 RAL-321 821 chr2R 6539801 6539855 chr2R 6539944 6539990 14 137 2.5 5.5 4.0 2.8 189 chr2R 6539801 intron jing + chr2R 6539896 intron jing + chr2R 6539990 intron jing + chr2R_14_6535001 chr2R_6535001 RAL-321 822 chr2R 6579780 6579806 chr2R 6584887 6584913 flea 14 5107 6.5 5.0 5.8 2.1 5133 chr2R 6579780 intron jing + chr2R 6582346 intron jing + chr2R 6584913 intron jing + chr2R_14_6580001 chr2R_6580001 RAL-321 823 chr2R 6646225 6646228 chr2R 6647153 6647160 INE-1 6 929 35.0 23.5 29.2 0.2 935 chr2R 6646225 intergenic not near genes chr2R 6646692 intergenic not near genes chr2R 6647160 intergenic not near genes chr2R_6_6645001 chr2R_6645001 RAL-321 824 chr2R 6664165 6664202 chr2R 6665986 6666023 S-element 12 1820 11.0 6.5 8.8 1.2 1858 chr2R 6664165 intron,3` UTR Adf1 +,CR45128 - chr2R 6665094 intron Adf1 + chr2R 6666023 intron Adf1 + chr2R_12_6665001 chr2R_6665001 RAL-321 825 chr2R 6825433 6825451 chr2R 6825546 6825564 14 113 9.0 8.5 8.8 1.4 131 chr2R 6825433 intergenic not near genes chr2R 6825498 intergenic not near genes chr2R 6825564 intergenic not near genes chr2R_14_6825001 chr2R_6825001 RAL-321 826 chr2R 6825452 6825467 chr2R 6825532 6825580 11 110 5.5 5.5 5.5 1.7 128 chr2R 6825452 intergenic not near genes chr2R 6825516 intergenic not near genes chr2R 6825580 intergenic not near genes chr2R_11_6825001 chr2R_6825001 RAL-321 827 chr2R 6865667 6865720 chr2R 6865782 6865835 23 115 5.5 6.0 5.8 3.4 168 chr2R 6865667 intron coro - chr2R 6865751 intron coro - chr2R 6865835 intron coro - chr2R_23_6865001 chr2R_6865001 RAL-321 828 chr2R 6876203 6876251 chr2R 6876305 6876353 22 101 8.5 6.5 7.5 2.6 150 chr2R 6876203 intron,intron CR44169 +,Spn42Da - chr2R 6876278 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876353 5` UTR,intron CR44169 +,Spn42Da - chr2R_22_6875001 chr2R_6875001 RAL-321 829 chr2R 6881471 6881522 chr2R 6881583 6881634 17 112 3.5 7.0 5.2 2.7 163 chr2R 6881471 intron Spn42Dc + chr2R 6881552 intron Spn42Dc + chr2R 6881634 intron Spn42Dc + chr2R_17_6880001 chr2R_6880001 RAL-321 830 chr2R 6921652 6921694 chr2R 6921766 6921808 18 114 7.0 9.0 8.0 2.0 156 chr2R 6921652 3` UTR CG30158 + chr2R 6921730 3` UTR CG30158 + chr2R 6921808 3` UTR CG30158 + chr2R_18_6920001 chr2R_6920001 RAL-321 831 chr2R 6952151 6952185 chr2R 6959751 6959785 opus 10 7600 2.0 7.5 4.8 1.7 7634 chr2R 6952151 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959785 intron,intron mim -,CheB42c - chr2R_10_6955001 chr2R_6955001 RAL-321 832 chr2R 6965241 6965293 chr2R 6965347 6965398 29 102 7.0 8.0 7.5 3.4 157 chr2R 6965241 intron,intron mim -,CheB42c - chr2R 6965320 intron,intron mim -,CheB42c - chr2R 6965398 intron,intron mim -,CheB42c - chr2R_29_6965001 chr2R_6965001 RAL-321 833 chr2R 7039160 7039167 chr2R 7039444 7039487 9 294 2.0 7.5 4.8 1.6 327 chr2R 7039160 intergenic CG33914 - chr2R 7039324 intergenic CG33914 - chr2R 7039487 intergenic CG33914 - chr2R_9_7035001 chr2R_7035001 RAL-321 834 chr2R 7052333 7052357 chr2R 7052548 7052572 9 215 6.0 6.0 6.0 1.3 239 chr2R 7052333 intergenic lbm +,Tsp42En + chr2R 7052452 intergenic Tsp42En +,lbm + chr2R 7052572 intergenic Tsp42En + chr2R_9_7050001 chr2R_7050001 RAL-321 835 chr2R 7067575 7067622 chr2R 7067679 7067726 20 104 3.5 5.5 4.5 3.6 151 chr2R 7067575 intergenic not near genes chr2R 7067650 intergenic not near genes chr2R 7067726 intergenic not near genes chr2R_20_7065001 chr2R_7065001 RAL-321 836 chr2R 7091190 7091242 chr2R 7091292 7091344 23 102 5.0 7.5 6.2 3.2 154 chr2R 7091190 intron esn + chr2R 7091267 intron esn + chr2R 7091344 intron esn + chr2R_23_7090001 chr2R_7090001 RAL-321 837 chr2R 7129197 7129240 chr2R 7132847 7132890 21 3654 46.5 53.0 49.8 0.4 3693 chr2R 7129197 exon Cyp9b1 - chr2R 7131044 exon Cyp9b2 - chr2R 7132890 intergenic not near genes chr2R_21_7130001 chr2R_7130001 RAL-321 838 chr2R 7139946 7139950 chr2R 7141453 7141462 hopper2 5 1510 2.0 16.5 9.2 0.5 1516 chr2R 7139946 intergenic not near genes chr2R 7140704 intergenic not near genes chr2R 7141462 intergenic not near genes chr2R_5_7140001 chr2R_7140001 RAL-321 839 chr2R 7180985 7181020 chr2R 7181081 7181116 19 95 7.5 10.0 8.8 1.9 131 chr2R 7180985 intron pk + chr2R 7181050 intron pk + chr2R 7181116 intron pk + chr2R_19_7180001 chr2R_7180001 RAL-321 840 chr2R 7196552 7196589 chr2R 7201347 7201384 F-element 16 4795 6.5 0.5 3.5 3.6 4832 chr2R 7196552 intron pk + chr2R 7198968 intron pk + chr2R 7201384 intron pk + chr2R_16_7195001 chr2R_7195001 RAL-321 841 chr2R 7209845 7209856 chr2R 7217613 7217624 roo 6 7768 13.5 11.5 12.5 0.4 7779 chr2R 7209845 intron pk + chr2R 7213734 intron pk + chr2R 7217624 intron pk + chr2R_6_7210001 chr2R_7210001 RAL-321 842 chr2R 7209857 7209872 chr2R 7217604 7217640 roo 11 7765 10.0 10.0 10.0 1.0 7783 chr2R 7209857 intron pk + chr2R 7213748 intron pk + chr2R 7217640 intron pk + chr2R_11_7210001 chr2R_7210001 RAL-321 843 chr2R 7235803 7235818 chr2R 7240915 7240930 jockey 4 5112 20.5 3.5 12.0 0.3 5127 chr2R 7235803 intergenic not near genes chr2R 7238366 intergenic not near genes chr2R 7240930 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-321 844 chr2R 7235821 7235849 chr2R 7240908 7240951 jockey 9 5104 10.5 3.0 6.8 1.2 5130 chr2R 7235821 intergenic not near genes chr2R 7238386 intergenic not near genes chr2R 7240951 intergenic not near genes chr2R_9_7235001 chr2R_7235001 RAL-321 845 chr2R 7242610 7242619 chr2R 7242692 7242725 10 103 4.0 0.5 2.2 3.1 115 chr2R 7242610 intergenic Ady43A - chr2R 7242668 intergenic Ady43A - chr2R 7242725 intergenic Ady43A - chr2R_10_7240001 chr2R_7240001 RAL-321 846 chr2R 7250723 7250755 chr2R 7250821 7250839 15 95 2.5 6.5 4.5 2.7 116 chr2R 7250723 intergenic Gadd45 + chr2R 7250781 intergenic Gadd45 + chr2R 7250839 intergenic Gadd45 + chr2R_15_7250001 chr2R_7250001 RAL-321 847 chr2R 7262179 7262213 chr2R 7269260 7269292 297 5 7076 7.0 10.0 8.5 0.5 7113 chr2R 7262179 intergenic not near genes chr2R 7265736 intergenic not near genes chr2R 7269292 intergenic not near genes chr2R_5_7265001 chr2R_7265001 RAL-321 848 chr2R 7272226 7272286 chr2R 7272338 7272388 8 96 0.0 1.5 0.8 4.4 162 chr2R 7272226 intergenic Br140 - chr2R 7272307 3` UTR Br140 - chr2R 7272388 3` UTR Br140 - chr2R_8_7270001 chr2R_7270001 RAL-321 849 chr2R 7290180 7290224 chr2R 7290302 7290346 18 121 3.5 9.5 6.5 2.4 166 chr2R 7290180 intron pwn + chr2R 7290263 intron pwn + chr2R 7290346 intron pwn + chr2R_18_7290001 chr2R_7290001 RAL-321 850 chr2R 7353369 7353419 chr2R 7353495 7353545 21 125 8.5 7.0 7.8 2.4 176 chr2R 7353369 intron Dscam1 - chr2R 7353457 intron Dscam1 - chr2R 7353545 intron Dscam1 - chr2R_21_7350001 chr2R_7350001 RAL-321 851 chr2R 7417900 7418169 chr2R 7418006 7418268 41 99 6.0 16.5 11.2 3.4 368 chr2R 7417900 intergenic not near genes chr2R 7418084 intergenic not near genes chr2R 7418268 intergenic not near genes chr2R_41_7415001 chr2R_7415001 RAL-321 852 chr2R 7434877 7434911 chr2R 7439198 7439232 Juan 18 4321 11.0 10.0 10.5 1.6 4355 chr2R 7434877 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439232 intergenic not near genes chr2R_18_7435001 chr2R_7435001 RAL-321 853 chr2R 7554085 7554137 chr2R 7554192 7554244 25 103 7.5 6.0 6.8 3.2 159 chr2R 7554085 intron Corin + chr2R 7554164 intron Corin + chr2R 7554244 intron Corin + chr2R_25_7550001 chr2R_7550001 RAL-321 854 chr2R 7562737 7562753 chr2R 7562839 7562855 11 101 14.0 10.0 12.0 0.8 118 chr2R 7562737 3` UTR Corin + chr2R 7562796 3` UTR Corin + chr2R 7562855 3` UTR Corin + chr2R_11_7560001 chr2R_7560001 RAL-321 855 chr2R 7604732 7604776 chr2R 7604881 7604925 18 140 4.0 3.5 3.8 3.8 193 chr2R 7604732 intron CG1358 - chr2R 7604828 intron CG1358 - chr2R 7604925 intron CG1358 - chr2R_18_7600001 chr2R_7600001 RAL-321 856 chr2R 7608393 7608396 chr2R 7613610 7613619 I-element 5 5222 15.0 0.0 7.5 0.6 5226 chr2R 7608393 intron CG1358 - chr2R 7611006 intron CG1358 - chr2R 7613619 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-321 857 chr2R 7714063 7714077 chr2R 7714159 7714173 9 96 12.0 4.5 8.2 1.0 110 chr2R 7714063 exon CG1942 + chr2R 7714118 exon CG1942 + chr2R 7714173 3` UTR CG1942 + chr2R_9_7710001 chr2R_7710001 RAL-321 858 chr2R 7714080 7714117 chr2R 7714156 7714219 12 95 5.5 5.5 5.5 1.8 139 chr2R 7714080 exon CG1942 + chr2R 7714150 3` UTR CG1942 + chr2R 7714219 intergenic CG1942 + chr2R_12_7710001 chr2R_7710001 RAL-321 859 chr2R 7724576 7724629 chr2R 7725283 7725336 23 705 5.5 6.0 5.8 3.4 760 chr2R 7724576 intron CG18812 - chr2R 7724956 intron CG18812 - chr2R 7725336 intron CG18812 - chr2R_23_7720001 chr2R_7720001 RAL-321 860 chr2R 7737890 7737906 chr2R 7737989 7738005 11 99 18.0 11.5 14.8 0.7 115 chr2R 7737890 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738005 intergenic not near genes chr2R_11_7735001 chr2R_7735001 RAL-321 861 chr2R 7766631 7766683 chr2R 7766995 7767047 22 361 3.0 7.0 5.0 3.7 416 chr2R 7766631 intron,intron CG30497 -,CG45093 - chr2R 7766839 intron,intron CG30497 -,CG45093 - chr2R 7767047 intron,intron CG30497 -,CG45093 - chr2R_22_7765001 chr2R_7765001 RAL-321 862 chr2R 7769717 7769770 chr2R 7769814 7769862 26 97 5.0 4.5 4.8 4.5 145 chr2R 7769717 intron,intron CG30497 -,CG45093 - chr2R 7769790 intron,intron CG30497 -,CG45093 - chr2R 7769862 intron,intron CG30497 -,CG45093 - chr2R_26_7765001 chr2R_7765001 RAL-321 863 chr2R 7815651 7815700 chr2R 7822140 7822189 Burdock 15 6489 6.5 8.0 7.2 1.8 6538 chr2R 7815651 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822189 3` UTR cathD - chr2R_15_7815001 chr2R_7815001 RAL-321 864 chr2R 7862229 7862251 chr2R 7867345 7867382 flea 9 5130 3.0 4.5 3.8 1.9 5153 chr2R 7862229 intron Dgk - chr2R 7864806 intron Dgk - chr2R 7867382 intron Dgk - chr2R_9_7860001 chr2R_7860001 RAL-321 865 chr2R 7869177 7869214 chr2R 7873982 7874015 Doc 18 4804 9.5 6.5 8.0 2.0 4838 chr2R 7869177 intron Dgk - chr2R 7871596 intron Dgk - chr2R 7874015 intron Dgk - chr2R_18_7870001 chr2R_7870001 RAL-321 866 chr2R 7897136 7897145 chr2R 7897230 7897254 6 106 0.0 11.0 5.5 0.9 118 chr2R 7897136 intron CG30377 + chr2R 7897195 intron CG30377 + chr2R 7897254 intron CG30377 + chr2R_6_7895001 chr2R_7895001 RAL-321 867 chr2R 7897146 7897154 chr2R 7897225 7897263 5 99 0.0 10.5 5.2 0.8 117 chr2R 7897146 intron CG30377 + chr2R 7897204 intron CG30377 + chr2R 7897263 intron CG30377 + chr2R_5_7895001 chr2R_7895001 RAL-321 868 chr2R 7999578 7999586 chr2R 7999671 7999689 8 102 4.0 0.0 2.0 2.7 111 chr2R 7999578 intergenic not near genes chr2R 7999634 intergenic not near genes chr2R 7999689 intergenic not near genes chr2R_8_7995001 chr2R_7995001 RAL-321 869 chr2R 8026792 8026836 chr2R 8026888 8026932 21 94 6.5 5.5 6.0 3.0 140 chr2R 8026792 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026932 intergenic CR45267 + chr2R_21_8025001 chr2R_8025001 RAL-321 870 chr2R 8052475 8052529 chr2R 8052693 8052727 9 212 8.0 0.0 4.0 1.8 252 chr2R 8052475 3` UTR CG12769 - chr2R 8052601 3` UTR CG12769 - chr2R 8052727 3` UTR CG12769 - chr2R_9_8050001 chr2R_8050001 RAL-321 871 chr2R 8067049 8067094 chr2R 8067153 8067198 27 103 6.0 12.0 9.0 2.7 149 chr2R 8067049 intron CG17977 - chr2R 8067124 intron CG17977 - chr2R 8067198 exon CG17977 - chr2R_27_8065001 chr2R_8065001 RAL-321 872 chr2R 8089242 8089286 chr2R 8089348 8089392 23 106 5.5 7.5 6.5 3.1 150 chr2R 8089242 3` UTR sut2 + chr2R 8089317 intergenic sut2 +,sut3 + chr2R 8089392 intergenic sut3 +,sut2 + chr2R_23_8085001 chr2R_8085001 RAL-321 873 chr2R 8152666 8152713 chr2R 8152771 8152818 22 105 8.5 7.5 8.0 2.4 152 chr2R 8152666 intron,intron Lpin -,kermit - chr2R 8152742 intron,intron Lpin -,kermit - chr2R 8152818 intron,intron Lpin -,kermit - chr2R_22_8150001 chr2R_8150001 RAL-321 874 chr2R 8157888 8157911 chr2R 8157990 8158019 9 104 3.5 5.5 4.5 1.6 131 chr2R 8157888 5` UTR CR44068 + chr2R 8157954 5` UTR CR44068 + chr2R 8158019 5` UTR CR44068 + chr2R_9_8155001 chr2R_8155001 RAL-321 875 chr2R 8173754 8173778 chr2R 8173850 8173876 8 98 10.5 12.5 11.5 0.6 122 chr2R 8173754 intergenic CG14757 -,LRP1 + chr2R 8173815 intergenic CG14757 -,LRP1 + chr2R 8173876 intergenic CG14757 -,LRP1 + chr2R_8_8170001 chr2R_8170001 RAL-321 876 chr2R 8173779 8173791 chr2R 8173843 8173889 9 91 8.5 11.0 9.8 0.8 110 chr2R 8173779 intergenic CG14757 -,LRP1 + chr2R 8173834 intergenic CG14757 -,LRP1 + chr2R 8173889 intergenic LRP1 +,CG14757 - chr2R_9_8170001 chr2R_8170001 RAL-321 877 chr2R 8203738 8203772 chr2R 8203850 8203884 10 112 8.0 6.0 7.0 1.2 146 chr2R 8203738 intron LRP1 + chr2R 8203811 intron LRP1 + chr2R 8203884 intron LRP1 + chr2R_10_8200001 chr2R_8200001 RAL-321 878 chr2R 8236016 8236056 chr2R 8236117 8236156 10 100 7.5 5.5 6.5 1.3 140 chr2R 8236016 intergenic not near genes chr2R 8236086 intergenic not near genes chr2R 8236156 intergenic not near genes chr2R_10_8235001 chr2R_8235001 RAL-321 879 chr2R 8330846 8330889 chr2R 8331352 8331395 roo 24 506 8.0 8.0 8.0 2.7 549 chr2R 8330846 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331395 intron pdm3 + chr2R_24_8330001 chr2R_8330001 RAL-321 880 chr2R 8345300 8345338 chr2R 8345423 8345461 16 120 3.0 9.0 6.0 2.3 161 chr2R 8345300 intron pdm3 + chr2R 8345380 intron pdm3 + chr2R 8345461 intron pdm3 + chr2R_16_8345001 chr2R_8345001 RAL-321 881 chr2R 8398209 8398224 chr2R 8402995 8403025 Doc 5 4795 10.5 6.5 8.5 0.5 4816 chr2R 8398209 intron CG2121 - chr2R 8400617 intron CG2121 - chr2R 8403025 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-321 882 chr2R 8398226 8398239 chr2R 8402989 8403040 Doc 7 4792 10.0 4.5 7.2 0.9 4814 chr2R 8398226 intron CG2121 - chr2R 8400633 intron CG2121 - chr2R 8403040 intron CG2121 - chr2R_7_8400001 chr2R_8400001 RAL-321 883 chr2R 8416302 8416314 chr2R 8417146 8417158 I-element 7 844 4.0 4.5 4.2 1.3 856 chr2R 8416302 intergenic not near genes chr2R 8416730 intergenic CG43296 - chr2R 8417158 intergenic CG43296 - chr2R_7_8415001 chr2R_8415001 RAL-321 884 chr2R 8483952 8483989 chr2R 8484048 8484085 23 94 6.0 8.5 7.2 2.8 133 chr2R 8483952 intron mtt - chr2R 8484018 intron mtt - chr2R 8484085 intron mtt - chr2R_23_8480001 chr2R_8480001 RAL-321 885 chr2R 8503834 8503853 chr2R 8504041 8504060 9 207 3.0 6.0 4.5 1.6 226 chr2R 8503834 intron mtt - chr2R 8503947 intron mtt - chr2R 8504060 intron mtt - chr2R_9_8500001 chr2R_8500001 RAL-321 886 chr2R 8508750 8508789 chr2R 8508841 8508885 12 92 2.0 7.0 4.5 2.2 135 chr2R 8508750 intron mtt - chr2R 8508818 intron mtt - chr2R 8508885 intron mtt - chr2R_12_8505001 chr2R_8505001 RAL-321 887 chr2R 8518780 8518798 chr2R 12066269 12066287 8 3547489 34.0 0.0 17.0 0.4 3547507 chr2R 8518780 intron mtt - chr2R 10292534 intron CAP + chr2R 12066287 intron CG8888 - chr2R_8_10290001 chr2R_10290001 RAL-321 888 chr2R 8524047 8524057 chr2R 8524149 8524159 6 102 12.5 7.0 9.8 0.6 112 chr2R 8524047 intron mtt - chr2R 8524103 intron mtt - chr2R 8524159 intron mtt - chr2R_6_8520001 chr2R_8520001 RAL-321 889 chr2R 8524060 8524082 chr2R 8524148 8524184 10 100 7.5 7.0 7.2 1.2 124 chr2R 8524060 intron mtt - chr2R 8524122 intron mtt - chr2R 8524184 intron mtt - chr2R_10_8520001 chr2R_8520001 RAL-321 890 chr2R 8566021 8566058 chr2R 8566982 8567025 1360 16 970 6.5 7.5 7.0 2.0 1004 chr2R 8566021 5` UTR Cyp6a14 - chr2R 8566523 5` UTR Cyp6a14 - chr2R 8567025 5` UTR Cyp6a14 - chr2R_16_8565001 chr2R_8565001 RAL-321 891 chr2R 8568723 8568773 chr2R 8568826 8568876 33 102 7.0 6.0 6.5 4.4 153 chr2R 8568723 intergenic not near genes chr2R 8568800 intergenic not near genes chr2R 8568876 intergenic not near genes chr2R_33_8565001 chr2R_8565001 RAL-321 892 chr2R 8569172 8569193 chr2R 8569505 8569518 12 332 8.0 6.0 7.0 1.5 346 chr2R 8569172 intergenic not near genes chr2R 8569345 intergenic not near genes chr2R 8569518 intergenic not near genes chr2R_12_8565001 chr2R_8565001 RAL-321 893 chr2R 8589744 8589794 chr2R 8589877 8589927 21 129 6.0 5.0 5.5 3.2 183 chr2R 8589744 intergenic not near genes chr2R 8589836 intergenic not near genes chr2R 8589927 intergenic not near genes chr2R_21_8585001 chr2R_8585001 RAL-321 894 chr2R 8627734 8627743 chr2R 8627833 8627842 6 99 6.0 2.5 4.2 1.2 108 chr2R 8627734 intergenic beta3GalTII -,CG14749 + chr2R 8627788 intergenic CG14749 +,beta3GalTII - chr2R 8627842 intergenic CG14749 +,beta3GalTII - chr2R_6_8625001 chr2R_8625001 RAL-321 895 chr2R 8653967 8654004 chr2R 8654075 8654112 16 106 5.0 6.5 5.8 2.4 145 chr2R 8653967 intron ptc + chr2R 8654040 intron ptc + chr2R 8654112 intron ptc + chr2R_16_8650001 chr2R_8650001 RAL-321 896 chr2R 8658225 8658249 chr2R 8658321 8658340 5 95 2.0 5.5 3.8 1.0 115 chr2R 8658225 intron ptc + chr2R 8658282 intron ptc + chr2R 8658340 intron ptc + chr2R_5_8655001 chr2R_8655001 RAL-321 897 chr2R 8722742 8722795 chr2R 8723003 8723039 pogo 18 255 7.0 4.5 5.8 2.6 297 chr2R 8722742 intron CG14767 - chr2R 8722890 intron CG14767 - chr2R 8723039 intron CG14767 - chr2R_18_8720001 chr2R_8720001 RAL-321 898 chr2R 8777930 8777946 chr2R 8784154 8784155 diver 4 6220 6.5 15.0 10.8 0.3 6225 chr2R 8777930 intergenic not near genes chr2R 8781042 intergenic not near genes chr2R 8784155 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-321 899 chr2R 8806312 8806325 chr2R 8806531 8806544 5 217 10.0 6.0 8.0 0.6 232 chr2R 8806312 intron sns + chr2R 8806428 intron sns + chr2R 8806544 intron sns + chr2R_5_8805001 chr2R_8805001 RAL-321 900 chr2R 8806328 8806357 chr2R 8806530 8806555 12 215 5.0 6.0 5.5 1.8 227 chr2R 8806328 intron sns + chr2R 8806442 intron sns + chr2R 8806555 intron sns + chr2R_12_8805001 chr2R_8805001 RAL-321 901 chr2R 8898612 8898660 chr2R 8898709 8898757 19 97 7.5 6.5 7.0 2.4 145 chr2R 8898612 3` UTR Sec31 + chr2R 8898684 3` UTR Sec31 + chr2R 8898757 3` UTR,3` UTR Sec31 +,ana2 - chr2R_19_8895001 chr2R_8895001 RAL-321 902 chr2R 8941555 8941599 chr2R 8941668 8941712 25 111 3.5 4.5 4.0 5.0 157 chr2R 8941555 intergenic CR44273 +,CG13748 + chr2R 8941634 5` UTR CR44273 + chr2R 8941712 5` UTR CR44273 + chr2R_25_8940001 chr2R_8940001 RAL-321 903 chr2R 8980086 8980112 chr2R 8980183 8980225 9 104 5.5 6.0 5.8 1.3 139 chr2R 8980086 intron CG8213 - chr2R 8980156 intron CG8213 - chr2R 8980225 intron CG8213 - chr2R_9_8980001 chr2R_8980001 RAL-321 904 chr2R 9047402 9047438 chr2R 9047517 9047553 8 115 6.5 5.0 5.8 1.2 151 chr2R 9047402 intron CG13743 - chr2R 9047478 intron CG13743 - chr2R 9047553 intron CG13743 - chr2R_8_9045001 chr2R_9045001 RAL-321 905 chr2R 9062002 9062054 chr2R 9062201 9062253 27 198 7.0 8.0 7.5 3.2 251 chr2R 9062002 intergenic CG8197 -,ana + chr2R 9062128 intergenic ana +,CG8197 - chr2R 9062253 intergenic ana +,CG8197 - chr2R_27_9060001 chr2R_9060001 RAL-321 906 chr2R 9065895 9065949 chr2R 9065997 9066051 25 102 6.5 6.5 6.5 3.3 156 chr2R 9065895 intron ana + chr2R 9065973 intron ana + chr2R 9066051 intron ana + chr2R_25_9065001 chr2R_9065001 RAL-321 907 chr2R 9151282 9151332 chr2R 9157772 9157822 Burdock 20 6489 11.5 10.5 11.0 1.7 6540 chr2R 9151282 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157822 intergenic CG8008 - chr2R_20_9150001 chr2R_9150001 RAL-321 908 chr2R 9198550 9198582 chr2R 9198651 9198683 11 101 9.0 0.0 4.5 2.0 133 chr2R 9198550 intron unpg + chr2R 9198616 intron unpg + chr2R 9198683 intron unpg + chr2R_11_9195001 chr2R_9195001 RAL-321 909 chr2R 9212676 9212684 chr2R 9213182 9213190 roo 5 505 12.0 4.5 8.2 0.5 514 chr2R 9212676 intergenic CR45309 + chr2R 9212933 intergenic CR45309 + chr2R 9213190 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-321 910 chr2R 9212692 9212723 chr2R 9213180 9213199 roo 7 497 6.0 4.5 5.2 1.1 507 chr2R 9212692 intergenic CR45309 + chr2R 9212946 intergenic CR45309 + chr2R 9213199 5` UTR CR45309 + chr2R_7_9210001 chr2R_9210001 RAL-321 911 chr2R 9315289 9315337 chr2R 9315390 9315393 16 96 6.5 7.5 7.0 2.0 104 chr2R 9315289 intron,intron CG13739 -,CG13954 - chr2R 9315341 intron,intron CG13739 -,CG13954 - chr2R 9315393 intron,intron CG13739 -,CG13954 - chr2R_16_9315001 chr2R_9315001 RAL-321 912 chr2R 9322356 9322366 chr2R 9322454 9322464 4 98 14.5 5.0 9.8 0.4 108 chr2R 9322356 intron,intron CG13739 -,CG13954 - chr2R 9322410 intron,intron CG13739 -,CG13954 - chr2R 9322464 intron,intron CG13739 -,CG13954 - chr2R_4_9320001 chr2R_9320001 RAL-321 913 chr2R 9322376 9322396 chr2R 9322444 9322494 12 92 6.5 5.0 5.8 1.8 118 chr2R 9322376 intron,intron CG13739 -,CG13954 - chr2R 9322435 intron,intron CG13739 -,CG13954 - chr2R 9322494 intron,intron CG13739 -,CG13954 - chr2R_12_9320001 chr2R_9320001 RAL-321 914 chr2R 9352254 9352255 chr2R 9361423 9361425 roo 4 9170 3.0 13.0 8.0 0.4 9171 chr2R 9352254 intron CG13954 - chr2R 9356840 intron CG13954 - chr2R 9361425 intron CG13954 - chr2R_4_9355001 chr2R_9355001 RAL-321 915 chr2R 9368111 9368151 chr2R 9368205 9368235 14 92 3.5 0.0 1.8 5.0 124 chr2R 9368111 intron CG13954 - chr2R 9368173 intron CG13954 - chr2R 9368235 intron CG13954 - chr2R_14_9365001 chr2R_9365001 RAL-321 916 chr2R 9378098 9378108 chr2R 9378195 9378210 4 101 17.0 6.0 11.5 0.3 112 chr2R 9378098 intron CG13954 - chr2R 9378154 intron CG13954 - chr2R 9378210 intron CG13954 - chr2R_4_9375001 chr2R_9375001 RAL-321 917 chr2R 9378111 9378142 chr2R 9378193 9378244 15 89 7.5 5.5 6.5 2.0 133 chr2R 9378111 intron CG13954 - chr2R 9378178 intron CG13954 - chr2R 9378244 intron CG13954 - chr2R_15_9375001 chr2R_9375001 RAL-321 918 chr2R 9480060 9480104 chr2R 9490611 9490655 roo 18 10551 7.0 7.5 7.2 2.2 10595 chr2R 9480060 intergenic not near genes chr2R 9485358 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_18_9485001 chr2R_9485001 RAL-321 919 chr2R 9510650 9510698 chr2R 9510786 9510824 7 135 2.0 4.5 3.2 1.7 174 chr2R 9510650 exon brp + chr2R 9510737 intron brp + chr2R 9510824 intron brp + chr2R_7_9510001 chr2R_9510001 RAL-321 920 chr2R 9540288 9540309 chr2R 9540389 9540410 5 101 7.0 9.0 8.0 0.6 122 chr2R 9540288 3` UTR brp + chr2R 9540349 3` UTR brp + chr2R 9540410 3` UTR brp + chr2R_5_9540001 chr2R_9540001 RAL-321 921 chr2R 9561805 9561845 chr2R 9561912 9561953 9 108 0.5 0.5 0.5 6.0 148 chr2R 9561805 3` UTR,intron CR45281 -,CG1809 + chr2R 9561879 3` UTR,intron CR45281 -,CG1809 + chr2R 9561953 3` UTR,intron CR45281 -,CG1809 + chr2R_9_9560001 chr2R_9560001 RAL-321 922 chr2R 9726597 9726639 chr2R 9734168 9734210 17.6 11 7571 5.0 6.5 5.8 1.6 7613 chr2R 9726597 intron sqa - chr2R 9730404 intron sqa - chr2R 9734210 intron sqa - chr2R_11_9730001 chr2R_9730001 RAL-321 923 chr2R 9807408 9807453 chr2R 9807571 9807617 4 163 0.0 4.5 2.2 1.2 209 chr2R 9807408 intergenic not near genes chr2R 9807512 intergenic not near genes chr2R 9807617 intergenic not near genes chr2R_4_9805001 chr2R_9805001 RAL-321 924 chr2R 9871051 9871070 chr2R 9871525 9871556 roo 8 492 2.0 9.5 5.8 1.2 505 chr2R 9871051 intron cbx - chr2R 9871304 intron cbx - chr2R 9871556 intron,5` UTR cbx -,CG18446 + chr2R_8_9870001 chr2R_9870001 RAL-321 925 chr2R 9945423 9945429 chr2R 9945638 9945640 BS 5 215 18.5 6.0 12.2 0.4 217 chr2R 9945423 intron Mef2 - chr2R 9945532 intron Mef2 - chr2R 9945640 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-321 926 chr2R 9945435 9945466 chr2R 9945630 9945682 BS 11 213 8.5 4.5 6.5 1.5 247 chr2R 9945435 intron Mef2 - chr2R 9945558 intron Mef2 - chr2R 9945682 intron Mef2 - chr2R_11_9945001 chr2R_9945001 RAL-321 927 chr2R 9998085 9998092 chr2R 9998199 9998206 7 114 3.5 11.5 7.5 0.8 121 chr2R 9998085 intron Pka-R2 - chr2R 9998146 intron Pka-R2 - chr2R 9998206 intron Pka-R2 - chr2R_7_9995001 chr2R_9995001 RAL-321 928 chr2R 10005538 10005580 chr2R 10005655 10005697 18 117 5.0 4.5 4.8 3.1 159 chr2R 10005538 intron Pka-R2 - chr2R 10005618 intron Pka-R2 - chr2R 10005697 intron Pka-R2 - chr2R_18_10005001 chr2R_10005001 RAL-321 929 chr2R 10005836 10005857 chr2R 10007017 10007042 1360 13 1183 8.0 4.0 6.0 1.9 1206 chr2R 10005836 intron Pka-R2 - chr2R 10006439 intron Pka-R2 - chr2R 10007042 intron Pka-R2 - chr2R_13_10005001 chr2R_10005001 RAL-321 930 chr2R 10005864 10005884 chr2R 10007013 10007034 1360 7 1172 4.0 3.5 3.8 1.5 1170 chr2R 10005864 intron Pka-R2 - chr2R 10006449 intron Pka-R2 - chr2R 10007034 intron Pka-R2 - chr2R_7_10005001 chr2R_10005001 RAL-321 931 chr2R 10008551 10008597 chr2R 10008649 10008705 8 96 5.5 0.5 3.0 2.0 154 chr2R 10008551 intron Pka-R2 - chr2R 10008628 intron Pka-R2 - chr2R 10008705 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-321 932 chr2R 10047798 10047839 chr2R 10047901 10047938 11 103 8.0 9.5 8.8 1.1 140 chr2R 10047798 intron oys - chr2R 10047868 intron oys - chr2R 10047938 intron oys - chr2R_11_10045001 chr2R_10045001 RAL-321 933 chr2R 6646713 6646715 chr2R 10162641 10162643 4 3515928 16.0 24.0 20.0 0.2 3515930 chr2R 6646713 intergenic not near genes chr2R 8404678 intron CG2121 - chr2R 10162643 intron KCNQ - chr2R_4_8400001 chr2R_8400001 RAL-321 934 chr2R 10168335 10168363 chr2R 10168432 10168460 8 94 4.0 7.0 5.5 1.2 125 chr2R 10168335 intron KCNQ - chr2R 10168398 intron KCNQ - chr2R 10168460 intron KCNQ - chr2R_8_10165001 chr2R_10165001 RAL-321 935 chr2R 10176857 10176912 chr2R 10186044 10186099 roo 25 9186 8.0 5.0 6.5 3.3 9242 chr2R 10176857 intron KCNQ - chr2R 10181478 intron KCNQ - chr2R 10186099 intron KCNQ - chr2R_25_10180001 chr2R_10180001 RAL-321 936 chr2R 10198213 10198249 chr2R 10198316 10198352 14 102 6.0 2.5 4.2 2.7 139 chr2R 10198213 intron CG34221 - chr2R 10198282 intron CG34221 - chr2R 10198352 intron CG34221 - chr2R_14_10195001 chr2R_10195001 RAL-321 937 chr2R 10221193 10221206 chr2R 10221320 10221333 12 127 14.0 5.0 9.5 1.1 140 chr2R 10221193 intron,intron CG12912 -,Hr46 - chr2R 10221263 intron,intron CG12912 -,Hr46 - chr2R 10221333 intron,intron CG12912 -,Hr46 - chr2R_12_10220001 chr2R_10220001 RAL-321 938 chr2R 10221208 10221241 chr2R 10221318 10221368 11 125 4.5 5.0 4.8 1.9 160 chr2R 10221208 intron,intron CG12912 -,Hr46 - chr2R 10221288 intron,intron CG12912 -,Hr46 - chr2R 10221368 intron,intron CG12912 -,Hr46 - chr2R_11_10220001 chr2R_10220001 RAL-321 939 chr2R 10234961 10234975 chr2R 10235070 10235084 5 109 7.0 0.0 3.5 1.1 123 chr2R 10234961 intron Hr46 - chr2R 10235022 intron Hr46 - chr2R 10235084 intron Hr46 - chr2R_5_10235001 chr2R_10235001 RAL-321 940 chr2R 10291817 10291857 chr2R 10291924 10291964 9 107 0.0 5.5 2.8 2.4 147 chr2R 10291817 intron CAP + chr2R 10291890 intron CAP + chr2R 10291964 intron CAP + chr2R_9_10290001 chr2R_10290001 RAL-321 941 chr2R 10313291 10313336 chr2R 10313405 10313450 26 114 3.5 3.0 3.2 6.2 159 chr2R 10313291 intergenic not near genes chr2R 10313370 intergenic not near genes chr2R 10313450 intergenic Ndg + chr2R_26_10310001 chr2R_10310001 RAL-321 942 chr2R 10318500 10318539 chr2R 10318606 10318645 13 106 8.5 6.0 7.2 1.6 145 chr2R 10318500 intron Ndg + chr2R 10318572 intron Ndg + chr2R 10318645 intron Ndg + chr2R_13_10315001 chr2R_10315001 RAL-321 943 chr2R 10322056 10322079 chr2R 10322158 10322181 7 102 6.0 6.0 6.0 1.0 125 chr2R 10322056 3` UTR Ndg + chr2R 10322118 intergenic Ndg + chr2R 10322181 intergenic Ndg + chr2R_7_10320001 chr2R_10320001 RAL-321 944 chr2R 10352651 10352704 chr2R 10352748 10352776 26 94 7.0 7.5 7.2 3.2 125 chr2R 10352651 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352714 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352776 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_26_10350001 chr2R_10350001 RAL-321 945 chr2R 10363191 10363232 chr2R 10363291 10363332 24 100 9.0 6.5 7.8 2.7 141 chr2R 10363191 intron,exon CG42732 -,Gr47a + chr2R 10363262 intron,intron CG42732 -,Gr47a + chr2R 10363332 intron,intron CG42732 -,Gr47a + chr2R_24_10360001 chr2R_10360001 RAL-321 946 chr2R 10363844 10363899 chr2R 10363943 10363991 28 98 7.0 5.5 6.2 3.9 147 chr2R 10363844 intron CG42732 - chr2R 10363918 intron CG42732 - chr2R 10363991 intron CG42732 - chr2R_28_10360001 chr2R_10360001 RAL-321 947 chr2R 10376121 10376123 chr2R 10376490 10376492 4 369 0.0 6.5 3.2 1.0 371 chr2R 10376121 intron CG42732 - chr2R 10376306 intron CG42732 - chr2R 10376492 intron CG42732 - chr2R_4_10375001 chr2R_10375001 RAL-321 948 chr2R 10376124 10376138 chr2R 10376487 10376507 4 368 0.0 5.0 2.5 1.1 383 chr2R 10376124 intron CG42732 - chr2R 10376316 intron CG42732 - chr2R 10376507 intron CG42732 - chr2R_4_10375001 chr2R_10375001 RAL-321 949 chr2R 10409040 10409085 chr2R 10409137 10409181 14 96 1.0 5.0 3.0 3.5 141 chr2R 10409040 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409181 intron,exon CG42732 -,CG33477 - chr2R_14_10405001 chr2R_10405001 RAL-321 950 chr2R 10428999 10429052 chr2R 10429096 10429149 16 92 5.0 4.0 4.5 2.9 150 chr2R 10428999 intergenic not near genes chr2R 10429074 intergenic not near genes chr2R 10429149 intergenic not near genes chr2R_16_10425001 chr2R_10425001 RAL-321 951 chr2R 10454079 10454128 chr2R 10454174 10454225 30 94 11.5 10.5 11.0 2.5 146 chr2R 10454079 intron,intron Galphao +,Cyp49a1 - chr2R 10454152 intron,intron Galphao +,Cyp49a1 - chr2R 10454225 intron,intron Galphao +,Cyp49a1 - chr2R_30_10450001 chr2R_10450001 RAL-321 952 chr2R 10469012 10469052 chr2R 10469148 10469188 29 136 5.0 6.0 5.5 4.5 176 chr2R 10469012 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469188 intron CG11777 + chr2R_29_10465001 chr2R_10465001 RAL-321 953 chr2R 10562169 10562213 chr2R 10562277 10562321 14 107 4.0 7.5 5.8 2.1 152 chr2R 10562169 exon psq + chr2R 10562245 intron psq + chr2R 10562321 intron psq + chr2R_14_10560001 chr2R_10560001 RAL-321 954 chr2R 10563903 10563913 chr2R 10564114 10564124 5 211 0.0 6.5 3.2 1.2 221 chr2R 10563903 intron psq + chr2R 10564014 intron psq + chr2R 10564124 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-321 955 chr2R 10574606 10574636 chr2R 10574708 10574738 5 102 10.0 10.5 10.2 0.4 132 chr2R 10574606 intron psq + chr2R 10574672 intron psq + chr2R 10574738 intron psq + chr2R_5_10570001 chr2R_10570001 RAL-321 956 chr2R 10622333 10622363 chr2R 10637117 10637117 mdg1 12 14781 10.0 0.5 5.2 1.9 14784 chr2R 10622333 intron CG11883 + chr2R 10629725 intron CG11883 + chr2R 10637117 intron CG11883 + chr2R_12_10625001 chr2R_10625001 RAL-321 957 chr2R 10644038 10644086 chr2R 10644136 10644184 22 98 5.5 0.0 2.8 5.8 146 chr2R 10644038 intron Git - chr2R 10644111 intron Git - chr2R 10644184 intron Git - chr2R_22_10640001 chr2R_10640001 RAL-321 958 chr2R 10693834 10693879 chr2R 10693936 10693972 25 98 8.0 4.5 6.2 3.5 138 chr2R 10693834 intron stan + chr2R 10693903 intron stan + chr2R 10693972 intron stan + chr2R_25_10690001 chr2R_10690001 RAL-321 959 chr2R 10697297 10697320 chr2R 10697403 10697426 11 106 15.0 7.0 11.0 0.9 129 chr2R 10697297 intron stan + chr2R 10697362 intron stan + chr2R 10697426 intron stan + chr2R_11_10695001 chr2R_10695001 RAL-321 960 chr2R 10698073 10698119 chr2R 10698171 10698217 24 92 6.5 9.0 7.8 2.7 144 chr2R 10698073 intron stan + chr2R 10698145 intron stan + chr2R 10698217 intron stan + chr2R_24_10695001 chr2R_10695001 RAL-321 961 chr2R 10748119 10748172 chr2R 10748219 10748272 9 100 5.0 5.0 5.0 1.5 153 chr2R 10748119 intron CG33144 - chr2R 10748196 intron CG33144 - chr2R 10748272 intron CG33144 - chr2R_9_10745001 chr2R_10745001 RAL-321 962 chr2R 10761546 10761589 chr2R 10761720 10761763 21 174 7.0 6.0 6.5 2.8 217 chr2R 10761546 intron,5` UTR CG33144 -,CR43605 + chr2R 10761654 intron,5` UTR CG33144 -,CR43605 + chr2R 10761763 intron CG33144 - chr2R_21_10760001 chr2R_10760001 RAL-321 963 chr2R 10770975 10771024 chr2R 10771076 10771125 26 98 5.0 2.5 3.8 5.4 150 chr2R 10770975 intron CG33144 - chr2R 10771050 intron CG33144 - chr2R 10771125 intron CG33144 - chr2R_26_10770001 chr2R_10770001 RAL-321 964 chr2R 10827315 10827362 chr2R 10827423 10827470 18 104 8.0 8.5 8.2 2.0 155 chr2R 10827315 exon CG12325 + chr2R 10827392 3` UTR CG12325 + chr2R 10827470 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_18_10825001 chr2R_10825001 RAL-321 965 chr2R 10834236 10834285 chr2R 10834695 10834737 13 457 45.5 38.0 41.8 0.3 501 chr2R 10834236 intron CG12344 - chr2R 10834486 intron CG12344 - chr2R 10834737 intron CG12344 - chr2R_13_10830001 chr2R_10830001 RAL-321 966 chr2R 10947074 10947124 chr2R 10947181 10947222 5 105 4.0 0.0 2.0 1.7 148 chr2R 10947074 5` UTR CR45228 + chr2R 10947148 intergenic CR45228 + chr2R 10947222 intergenic CR45228 + chr2R_5_10945001 chr2R_10945001 RAL-321 967 chr2R 10948013 10948046 chr2R 10955584 10955610 17.6 18 7568 2.0 11.0 6.5 2.4 7597 chr2R 10948013 intergenic not near genes chr2R 10951812 intergenic not near genes chr2R 10955610 intergenic not near genes chr2R_18_10950001 chr2R_10950001 RAL-321 968 chr2R 10948049 10948060 chr2R 10955578 10955631 17.6 6 7564 1.0 10.0 5.5 0.9 7582 chr2R 10948049 intergenic not near genes chr2R 10951840 intergenic not near genes chr2R 10955631 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-321 969 chr2R 10959071 10959112 chr2R 10959170 10959188 14 97 3.0 5.5 4.2 2.7 117 chr2R 10959071 intergenic not near genes chr2R 10959130 intergenic not near genes chr2R 10959188 intergenic not near genes chr2R_14_10955001 chr2R_10955001 RAL-321 970 chr2R 10979655 10979684 chr2R 10980147 10980174 297 4 490 0.5 8.0 4.2 0.8 519 chr2R 10979655 intergenic not near genes chr2R 10979914 intergenic not near genes chr2R 10980174 intergenic not near genes chr2R_4_10975001 chr2R_10975001 RAL-321 971 chr2R 11009797 11009847 chr2R 11018991 11019026 roo 21 9187 6.0 5.0 5.5 3.2 9229 chr2R 11009797 intron luna - chr2R 11014412 intron luna - chr2R 11019026 intron luna - chr2R_21_11010001 chr2R_11010001 RAL-321 972 chr2R 11019860 11019871 chr2R 11024946 11024957 jockey 7 5085 10.5 10.0 10.2 0.6 5097 chr2R 11019860 intron luna - chr2R 11022408 intron luna - chr2R 11024957 intron luna - chr2R_7_11020001 chr2R_11020001 RAL-321 973 chr2R 11019877 11019907 chr2R 11024945 11024968 jockey 12 5078 3.5 9.5 6.5 1.6 5091 chr2R 11019877 intron luna - chr2R 11022422 intron luna - chr2R 11024968 intron luna - chr2R_12_11020001 chr2R_11020001 RAL-321 974 chr2R 11066458 11066467 chr2R 11066541 11066565 6 93 1.5 7.5 4.5 1.1 107 chr2R 11066458 intron luna - chr2R 11066512 intron luna - chr2R 11066565 intron luna - chr2R_6_11065001 chr2R_11065001 RAL-321 975 chr2R 11144835 11144888 chr2R 11144947 11145001 14 113 3.0 5.0 4.0 2.8 166 chr2R 11144835 intron CG13229 - chr2R 11144918 intron CG13229 - chr2R 11145001 intron CG13229 - chr2R_14_11140001 chr2R_11140001 RAL-321 976 chr2R 11161641 11161655 chr2R 11161801 11161815 6 160 6.0 6.5 6.2 0.8 174 chr2R 11161641 intron,intron CG13229 -,shn + chr2R 11161728 intron,intron CG13229 -,shn + chr2R 11161815 intron,intron CG13229 -,shn + chr2R_6_11160001 chr2R_11160001 RAL-321 977 chr2R 11207798 11207845 chr2R 11208011 11208058 BS 27 212 8.0 11.5 9.8 2.5 260 chr2R 11207798 intron shn + chr2R 11207928 intron shn + chr2R 11208058 intron shn + chr2R_27_11205001 chr2R_11205001 RAL-321 978 chr2R 11262848 11262895 chr2R 11263011 11263058 17 161 4.5 6.5 5.5 2.6 210 chr2R 11262848 intergenic not near genes chr2R 11262953 intergenic not near genes chr2R 11263058 intergenic not near genes chr2R_17_11260001 chr2R_11260001 RAL-321 979 chr2R 11265707 11265744 chr2R 11265809 11265820 8 98 5.5 0.0 2.8 2.1 113 chr2R 11265707 exon Cpr47Ee + chr2R 11265764 exon Cpr47Ee + chr2R 11265820 intron Cpr47Ee + chr2R_8_11265001 chr2R_11265001 RAL-321 980 chr2R 11297607 11297643 chr2R 11301938 11301964 flea 21 4338 12.0 9.5 10.8 1.8 4357 chr2R 11297607 intergenic CG42336 - chr2R 11299786 intergenic not near genes chr2R 11301964 5` UTR CG7741 + chr2R_21_11295001 chr2R_11295001 RAL-321 981 chr2R 11344147 11344159 chr2R 11344263 11344275 4 116 0.0 7.0 3.5 0.9 128 chr2R 11344147 intergenic alphaTry - chr2R 11344211 intergenic alphaTry - chr2R 11344275 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-321 982 chr2R 11415518 11415544 chr2R 11418674 11418708 opus 12 3165 8.0 7.5 7.8 1.4 3190 chr2R 11415518 intron Drip - chr2R 11417113 intron Drip - chr2R 11418708 intron Drip - chr2R_12_11415001 chr2R_11415001 RAL-321 983 chr2R 11415545 11415551 chr2R 11418669 11418720 opus 7 3152 7.5 6.5 7.0 0.9 3175 chr2R 11415545 intron Drip - chr2R 11417132 intron Drip - chr2R 11418720 intron Drip - chr2R_7_11415001 chr2R_11415001 RAL-321 984 chr2R 11436608 11436611 chr2R 11436734 11436737 4 126 0.0 7.5 3.8 0.8 129 chr2R 11436608 intron CG7777 + chr2R 11436672 intron CG7777 + chr2R 11436737 intron CG7777 + chr2R_4_11435001 chr2R_11435001 RAL-321 985 chr2R 11472627 11472679 chr2R 11473844 11473890 pogo 24 1216 6.0 5.0 5.5 3.7 1263 chr2R 11472627 intergenic not near genes chr2R 11473258 intergenic not near genes chr2R 11473890 intergenic not near genes chr2R_24_11470001 chr2R_11470001 RAL-321 986 chr2R 11483632 11483673 chr2R 11483738 11483759 21 103 8.0 4.5 6.2 2.9 127 chr2R 11483632 intron inv + chr2R 11483696 intron inv + chr2R 11483759 intron inv + chr2R_21_11480001 chr2R_11480001 RAL-321 987 chr2R 11494292 11494339 chr2R 11494395 11494442 12 103 4.0 5.0 4.5 2.2 150 chr2R 11494292 intron inv + chr2R 11494367 intron inv + chr2R 11494442 intron inv + chr2R_12_11490001 chr2R_11490001 RAL-321 988 chr2R 11516773 11516826 chr2R 11516876 11516929 16 99 2.5 7.0 4.8 2.8 156 chr2R 11516773 intergenic not near genes chr2R 11516851 intergenic not near genes chr2R 11516929 intergenic not near genes chr2R_16_11515001 chr2R_11515001 RAL-321 989 chr2R 11528788 11528835 chr2R 11528997 11529044 17 209 1.5 7.0 4.2 3.3 256 chr2R 11528788 intergenic not near genes chr2R 11528916 intergenic not near genes chr2R 11529044 intergenic not near genes chr2R_17_11525001 chr2R_11525001 RAL-321 990 chr2R 11555379 11555425 chr2R 11555734 11555780 9 355 3.0 5.0 4.0 1.8 401 chr2R 11555379 intergenic not near genes chr2R 11555580 intergenic not near genes chr2R 11555780 intergenic not near genes chr2R_9_11555001 chr2R_11555001 RAL-321 991 chr2R 11631377 11631409 chr2R 11631477 11631509 16 100 0.0 7.5 3.8 3.3 132 chr2R 11631377 intron CG9005 - chr2R 11631443 intron CG9005 - chr2R 11631509 intron CG9005 - chr2R_16_11630001 chr2R_11630001 RAL-321 992 chr2R 11660347 11660397 chr2R 11660484 11660534 15 137 1.5 2.5 2.0 5.0 187 chr2R 11660347 intron Roc2 - chr2R 11660440 intron Roc2 - chr2R 11660534 intron Roc2 - chr2R_15_11660001 chr2R_11660001 RAL-321 993 chr2R 11677852 11677894 chr2R 11677950 11677991 14 98 6.5 5.5 6.0 2.0 139 chr2R 11677852 intron,exon Roc2 -,Tret1-2 + chr2R 11677922 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677991 intron,3` UTR Roc2 -,Tret1-2 + chr2R_14_11675001 chr2R_11675001 RAL-321 994 chr2R 11724136 11724183 chr2R 11724239 11724286 15 102 11.0 6.5 8.8 1.5 150 chr2R 11724136 intron pyr + chr2R 11724211 intron pyr + chr2R 11724286 intron pyr + chr2R_15_11720001 chr2R_11720001 RAL-321 995 chr2R 11792987 11793027 chr2R 11793092 11793143 10 103 8.5 0.0 4.2 1.9 156 chr2R 11792987 intron ths + chr2R 11793065 intron ths + chr2R 11793143 intron ths + chr2R_10_11790001 chr2R_11790001 RAL-321 996 chr2R 11861976 11862025 chr2R 11862081 11862130 25 105 4.0 3.5 3.8 5.2 154 chr2R 11861976 3` UTR CG34230 + chr2R 11862053 intergenic CG34230 +,TwdlBeta - chr2R 11862130 intergenic CG34230 +,TwdlBeta - chr2R_25_11860001 chr2R_11860001 RAL-321 997 chr2R 11928673 11928711 chr2R 11928771 11928794 10 96 0.0 9.0 4.5 1.8 121 chr2R 11928673 intergenic not near genes chr2R 11928734 intergenic not near genes chr2R 11928794 intergenic CR44312 - chr2R_10_11925001 chr2R_11925001 RAL-321 998 chr2R 12096831 12096850 chr2R 12097301 12097322 14 470 3.0 7.5 5.2 2.3 491 chr2R 12096831 intron jeb - chr2R 12097076 intron jeb - chr2R 12097322 intron jeb - chr2R_14_12095001 chr2R_12095001 RAL-321 999 chr2R 12120384 12120437 chr2R 12120486 12120531 17 88 6.0 6.0 6.0 2.4 147 chr2R 12120384 intergenic not near genes chr2R 12120458 intergenic not near genes chr2R 12120531 intergenic not near genes chr2R_17_12120001 chr2R_12120001 RAL-321 1000 chr2R 12124811 12124861 chr2R 12124915 12124964 19 104 7.0 4.0 5.5 2.9 153 chr2R 12124811 intergenic not near genes chr2R 12124888 intergenic not near genes chr2R 12124964 intergenic not near genes chr2R_19_12120001 chr2R_12120001 RAL-321 1001 chr2R 12185980 12186037 chr2R 12186095 12186152 51 114 7.0 10.0 8.5 5.4 172 chr2R 12185980 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_51_12185001 chr2R_12185001 RAL-321 1002 chr2R 12185222 12185236 chr2R 12188129 12188141 6 2905 41.0 161.5 101.2 0.1 2919 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188141 3` UTR Cyp6g1 + chr2R_6_12185001 chr2R_12185001 RAL-321 1003 chr2R 12187472 12187493 chr2R 12190069 12190124 76 2605 110.0 108.0 109.0 0.7 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_76_12185001 chr2R_12185001 RAL-321 1004 chr2R 12217565 12217602 chr2R 12217660 12217692 21 96 5.0 6.0 5.5 3.2 127 chr2R 12217565 intergenic not near genes chr2R 12217628 intergenic not near genes chr2R 12217692 intergenic not near genes chr2R_21_12215001 chr2R_12215001 RAL-321 1005 chr2R 12282661 12282715 chr2R 12282951 12282984 16 281 3.0 8.0 5.5 2.5 323 chr2R 12282661 intron CG42700 + chr2R 12282822 intron CG42700 + chr2R 12282984 intron CG42700 + chr2R_16_12280001 chr2R_12280001 RAL-321 1006 chr2R 12320705 12320735 chr2R 12320985 12321015 12 279 4.0 9.0 6.5 1.6 310 chr2R 12320705 3` UTR CR44316 - chr2R 12320860 intron CR44316 - chr2R 12321015 intergenic CR44316 -,CG13163 + chr2R_12_12320001 chr2R_12320001 RAL-321 1007 chr2R 12334870 12334886 chr2R 12334968 12334984 11 98 9.5 7.0 8.2 1.2 114 chr2R 12334870 intergenic CG8490 + chr2R 12334927 intergenic CG8490 + chr2R 12334984 intergenic CG8490 + chr2R_11_12330001 chr2R_12330001 RAL-321 1008 chr2R 12385345 12385375 chr2R 12385439 12385476 18 95 3.0 8.5 5.8 2.6 131 chr2R 12385345 intergenic not near genes chr2R 12385410 intergenic not near genes chr2R 12385476 intergenic not near genes chr2R_18_12385001 chr2R_12385001 RAL-321 1009 chr2R 12481161 12481170 chr2R 12482945 12482959 roo 4 1792 6.0 8.0 7.0 0.5 1798 chr2R 12481161 exon Dh44-R2 + chr2R 12482060 intron Dh44-R2 + chr2R 12482959 intron Dh44-R2 + chr2R_4_12480001 chr2R_12480001 RAL-321 1010 chr2R 12501699 12501723 chr2R 12503859 12503890 Rt1c 8 2174 2.5 10.5 6.5 1.1 2191 chr2R 12501699 intron fdl - chr2R 12502794 intron fdl - chr2R 12503890 intron fdl - chr2R_8_12500001 chr2R_12500001 RAL-321 1011 chr2R 12529887 12529911 chr2R 12530000 12530024 9 113 6.5 0.0 3.2 2.1 137 chr2R 12529887 intron fra + chr2R 12529956 intron fra + chr2R 12530024 intron fra + chr2R_9_12525001 chr2R_12525001 RAL-321 1012 chr2R 12565545 12565594 chr2R 12565943 12565958 18 378 0.0 5.5 2.8 4.7 413 chr2R 12565545 intergenic not near genes chr2R 12565752 intergenic Cyp301a1 + chr2R 12565958 intergenic Cyp301a1 + chr2R_18_12565001 chr2R_12565001 RAL-321 1013 chr2R 12602790 12602834 chr2R 12602894 12602938 19 102 6.0 7.0 6.5 2.5 148 chr2R 12602790 intron Amph + chr2R 12602864 intron Amph + chr2R 12602938 intron Amph + chr2R_19_12600001 chr2R_12600001 RAL-321 1014 chr2R 12643767 12643814 chr2R 12643863 12643911 24 92 6.5 5.0 5.8 3.5 144 chr2R 12643767 intron CG8785 - chr2R 12643839 intron CG8785 - chr2R 12643911 exon CG8785 - chr2R_24_12640001 chr2R_12640001 RAL-321 1015 chr2R 12707509 12707547 chr2R 12715895 12715933 roo 26 8385 4.5 7.0 5.8 3.8 8424 chr2R 12707509 intron CG42663 + chr2R 12711721 intron CG42663 + chr2R 12715933 intron CG42663 + chr2R_26_12710001 chr2R_12710001 RAL-321 1016 chr2R 12726306 12726353 chr2R 12726413 12726465 23 109 4.0 7.0 5.5 3.5 159 chr2R 12726306 intron CG42663 + chr2R 12726386 intron CG42663 + chr2R 12726465 intron CG42663 + chr2R_23_12725001 chr2R_12725001 RAL-321 1017 chr2R 12728854 12728905 chr2R 12728977 12729023 16 120 0.0 6.0 3.0 4.0 169 chr2R 12728854 intron CG42663 + chr2R 12728938 intron CG42663 + chr2R 12729023 intron CG42663 + chr2R_16_12725001 chr2R_12725001 RAL-321 1018 chr2R 12734037 12734091 chr2R 12734138 12734189 23 99 4.0 7.0 5.5 3.5 152 chr2R 12734037 intron CG42663 + chr2R 12734113 intron CG42663 + chr2R 12734189 intron CG42663 + chr2R_23_12730001 chr2R_12730001 RAL-321 1019 chr2R 12757480 12757526 chr2R 12757595 12757611 25 111 7.5 5.0 6.2 3.5 131 chr2R 12757480 5` UTR ox - chr2R 12757546 5` UTR Dgkepsilon + chr2R 12757611 5` UTR Dgkepsilon + chr2R_25_12755001 chr2R_12755001 RAL-321 1020 chr2R 12771316 12771359 chr2R 12771430 12771473 17 114 7.5 6.0 6.8 2.2 157 chr2R 12771316 intergenic not near genes chr2R 12771394 intergenic not near genes chr2R 12771473 intergenic not near genes chr2R_17_12770001 chr2R_12770001 RAL-321 1021 chr2R 12789273 12789322 chr2R 12797656 12797702 roo 18 8376 8.5 7.5 8.0 2.0 8429 chr2R 12789273 intron,3` UTR sca +,CR45137 - chr2R 12793488 intron,intron sca +,CR45137 - chr2R 12797702 intron,3` UTR sca +,CR45137 - chr2R_18_12790001 chr2R_12790001 RAL-321 1022 chr2R 12798133 12798177 chr2R 12798610 12798654 14 477 1.5 5.5 3.5 3.1 521 chr2R 12798133 intron,3` UTR sca +,CR45137 - chr2R 12798394 intron,3` UTR sca +,CR45137 - chr2R 12798654 intron,3` UTR sca +,CR45137 - chr2R_14_12795001 chr2R_12795001 RAL-321 1023 chr2R 12819433 12819479 chr2R 12824522 12824568 jockey 19 5089 3.5 3.0 3.2 4.5 5135 chr2R 12819433 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824568 intergenic not near genes chr2R_19_12820001 chr2R_12820001 RAL-321 1024 chr2R 12959354 12959363 chr2R 12959452 12959461 7 98 1.5 11.5 6.5 0.9 107 chr2R 12959354 intergenic not near genes chr2R 12959408 intergenic not near genes chr2R 12959461 intergenic not near genes chr2R_7_12955001 chr2R_12955001 RAL-321 1025 chr2R 13017402 13017441 chr2R 13017507 13017546 14 101 5.0 6.0 5.5 2.2 144 chr2R 13017402 intergenic not near genes chr2R 13017474 intergenic not near genes chr2R 13017546 intergenic not near genes chr2R_14_13015001 chr2R_13015001 RAL-321 1026 chr2R 13034676 13034679 chr2R 13034776 13034779 4 100 0.0 0.0 0.0 4.0 103 chr2R 13034676 intergenic not near genes chr2R 13034728 intergenic not near genes chr2R 13034779 intergenic not near genes chr2R_4_13030001 chr2R_13030001 RAL-321 1027 chr2R 13073606 13073609 chr2R 13073973 13073991 4 376 1.5 22.5 12.0 0.3 385 chr2R 13073606 intron Drl-2 - chr2R 13073798 intron Drl-2 - chr2R 13073991 intron Drl-2 - chr2R_4_13070001 chr2R_13070001 RAL-321 1028 chr2R 13136832 13136851 chr2R 13141650 13141669 Doc 7 4818 13.0 9.5 11.2 0.6 4837 chr2R 13136832 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141669 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-321 1029 chr2R 13136853 13136864 chr2R 13141636 13141672 Doc 4 4807 9.5 6.5 8.0 0.4 4819 chr2R 13136853 exon Cap-G + chr2R 13139262 intron Cap-G + chr2R 13141672 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-321 1030 chr2R 13167409 13167445 chr2R 13167523 13167559 23 114 6.5 0.0 3.2 5.5 150 chr2R 13167409 intron GLaz - chr2R 13167484 intron GLaz - chr2R 13167559 intron GLaz - chr2R_23_13165001 chr2R_13165001 RAL-321 1031 chr2R 13195816 13195855 chr2R 13195920 13195934 15 97 9.0 12.5 10.8 1.3 118 chr2R 13195816 intergenic not near genes chr2R 13195875 intergenic not near genes chr2R 13195934 intergenic not near genes chr2R_15_13195001 chr2R_13195001 RAL-321 1032 chr2R 13364687 13364726 chr2R 13364793 13364832 20 104 7.5 8.0 7.8 2.3 145 chr2R 13364687 intergenic not near genes chr2R 13364760 intergenic not near genes chr2R 13364832 intergenic not near genes chr2R_20_13360001 chr2R_13360001 RAL-321 1033 chr2R 13368739 13368788 chr2R 13368870 13368919 10 131 5.0 0.0 2.5 2.9 180 chr2R 13368739 intergenic not near genes chr2R 13368829 intergenic not near genes chr2R 13368919 intergenic not near genes chr2R_10_13365001 chr2R_13365001 RAL-321 1034 chr2R 13439089 13439225 chr2R 13439224 13439321 24 148 0.0 0.0 0.0 24.0 232 chr2R 13439089 intergenic CG42321 -,cnn - chr2R 13439205 intergenic cnn -,CG42321 - chr2R 13439321 3` UTR cnn - chr2R_24_13435001 chr2R_13435001 RAL-321 1035 chr2R 13449665 13449670 chr2R 13449762 13449767 5 97 2.0 1.0 1.5 2.0 102 chr2R 13449665 intron cnn - chr2R 13449716 intron cnn - chr2R 13449767 intron cnn - chr2R_5_13445001 chr2R_13445001 RAL-321 1036 chr2R 13547061 13547108 chr2R 13547276 13547323 25 214 7.0 8.0 7.5 2.9 262 chr2R 13547061 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547323 intron CG6145 - chr2R_25_13545001 chr2R_13545001 RAL-321 1037 chr2R 13554737 13554774 chr2R 13554842 13554879 17 105 0.0 10.5 5.2 2.7 142 chr2R 13554737 intron Roe1 + chr2R 13554808 intron Roe1 + chr2R 13554879 intron Roe1 + chr2R_17_13550001 chr2R_13550001 RAL-321 1038 chr2R 13566239 13566278 chr2R 13566339 13566378 26 98 7.5 0.5 4.0 5.2 139 chr2R 13566239 intergenic not near genes chr2R 13566308 intergenic not near genes chr2R 13566378 intergenic not near genes chr2R_26_13565001 chr2R_13565001 RAL-321 1039 chr2R 13580483 13580527 chr2R 13580853 13580897 jockey 16 369 6.0 4.5 5.2 2.6 414 chr2R 13580483 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580897 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_16_13580001 chr2R_13580001 RAL-321 1040 chr2R 13648473 13648507 chr2R 13648674 13648713 15 204 4.5 3.5 4.0 3.0 240 chr2R 13648473 intron fas + chr2R 13648593 intron fas + chr2R 13648713 intron fas + chr2R_15_13645001 chr2R_13645001 RAL-321 1041 chr2R 13684244 13684272 chr2R 13684342 13684370 14 98 4.5 2.5 3.5 3.1 126 chr2R 13684244 intron fas + chr2R 13684307 intron fas + chr2R 13684370 intron fas + chr2R_14_13680001 chr2R_13680001 RAL-321 1042 chr2R 13709835 13709854 chr2R 13709948 13709967 11 113 4.0 12.5 8.2 1.2 132 chr2R 13709835 intron fas + chr2R 13709901 intron fas + chr2R 13709967 intron fas + chr2R_11_13705001 chr2R_13705001 RAL-321 1043 chr2R 13728112 13728160 chr2R 13735789 13735837 opus 26 7677 10.0 7.5 8.8 2.7 7725 chr2R 13728112 intron fas + chr2R 13731974 intron fas + chr2R 13735837 intron fas + chr2R_26_13730001 chr2R_13730001 RAL-321 1044 chr2R 13768965 13769009 chr2R 13769079 13769128 16 114 6.0 6.0 6.0 2.3 163 chr2R 13768965 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769128 intergenic not near genes chr2R_16_13765001 chr2R_13765001 RAL-321 1045 chr2R 13790306 13790327 chr2R 13790402 13790423 12 96 9.0 0.0 4.5 2.2 117 chr2R 13790306 intergenic not near genes chr2R 13790364 intergenic not near genes chr2R 13790423 intergenic not near genes chr2R_12_13790001 chr2R_13790001 RAL-321 1046 chr2R 13793128 13793153 chr2R 13793224 13793249 9 95 8.0 4.5 6.2 1.2 121 chr2R 13793128 intergenic not near genes chr2R 13793188 intergenic not near genes chr2R 13793249 intergenic not near genes chr2R_9_13790001 chr2R_13790001 RAL-321 1047 chr2R 13905588 13905627 chr2R 13907590 13907612 Rt1a 14 1999 15.0 9.0 12.0 1.1 2024 chr2R 13905588 intron shot - chr2R 13906600 intron shot - chr2R 13907612 intron shot - chr2R_14_13905001 chr2R_13905001 RAL-321 1048 chr2R 13912347 13912395 chr2R 13912472 13912520 34 125 6.0 7.5 6.8 4.4 173 chr2R 13912347 intron shot - chr2R 13912434 intron shot - chr2R 13912520 intron shot - chr2R_34_13910001 chr2R_13910001 RAL-321 1049 chr2R 13924452 13924462 chr2R 13924589 13924599 7 137 12.5 0.5 6.5 0.9 147 chr2R 13924452 intron shot - chr2R 13924526 intron shot - chr2R 13924599 intron shot - chr2R_7_13920001 chr2R_13920001 RAL-321 1050 chr2R 13925842 13925871 chr2R 13926028 13926066 16 195 3.5 6.0 4.8 2.8 224 chr2R 13925842 intron shot - chr2R 13925954 intron shot - chr2R 13926066 intron shot - chr2R_16_13925001 chr2R_13925001 RAL-321 1051 chr2R 13926296 13926336 chr2R 13926410 13926450 6 114 5.0 4.5 4.8 1.0 154 chr2R 13926296 intron shot - chr2R 13926373 intron shot - chr2R 13926450 intron shot - chr2R_6_13925001 chr2R_13925001 RAL-321 1052 chr2R 14018148 14018188 chr2R 14018252 14018292 16 104 4.0 10.5 7.2 2.0 144 chr2R 14018148 intron mam + chr2R 14018220 intron mam + chr2R 14018292 intron mam + chr2R_16_14015001 chr2R_14015001 RAL-321 1053 chr2R 14037243 14037298 chr2R 14037346 14037401 11 103 1.0 6.5 3.8 2.3 158 chr2R 14037243 intron mam + chr2R 14037322 intron mam + chr2R 14037401 intron mam + chr2R_11_14035001 chr2R_14035001 RAL-321 1054 chr2R 14050832 14050856 chr2R 14050941 14050950 10 104 8.5 10.0 9.2 1.0 118 chr2R 14050832 intron mam + chr2R 14050891 intron mam + chr2R 14050950 intron mam + chr2R_10_14050001 chr2R_14050001 RAL-321 1055 chr2R 14086653 14086661 chr2R 14086746 14086760 8 96 0.0 14.0 7.0 1.0 107 chr2R 14086653 intron Prosap - chr2R 14086706 intron Prosap - chr2R 14086760 intron Prosap - chr2R_8_14085001 chr2R_14085001 RAL-321 1056 chr2R 14093417 14093425 chr2R 14109585 14109596 5 16170 10.5 1.5 6.0 0.7 16179 chr2R 14093417 intron Prosap - chr2R 14101506 intron Prosap - chr2R 14109596 intron Prosap - chr2R_5_14100001 chr2R_14100001 RAL-321 1057 chr2R 14141936 14141953 chr2R 14142061 14142078 6 125 14.0 13.0 13.5 0.4 142 chr2R 14141936 intergenic not near genes chr2R 14142007 intergenic not near genes chr2R 14142078 intergenic not near genes chr2R_6_14140001 chr2R_14140001 RAL-321 1058 chr2R 14142425 14142470 chr2R 14142535 14142580 16 110 4.0 5.5 4.8 2.8 155 chr2R 14142425 intergenic not near genes chr2R 14142502 intergenic not near genes chr2R 14142580 intergenic not near genes chr2R_16_14140001 chr2R_14140001 RAL-321 1059 chr2R 14294810 14294861 chr2R 14294910 14294959 24 98 8.0 8.5 8.2 2.6 149 chr2R 14294810 intron Ih + chr2R 14294884 intron Ih + chr2R 14294959 intron Ih + chr2R_24_14290001 chr2R_14290001 RAL-321 1060 chr2R 14357535 14357573 chr2R 14357645 14357668 20 109 9.0 5.5 7.2 2.4 133 chr2R 14357535 intergenic CG8617 -,Arc1 - chr2R 14357602 intergenic CG8617 -,Arc1 - chr2R 14357668 intergenic Arc1 -,CG8617 - chr2R_20_14355001 chr2R_14355001 RAL-321 1061 chr2R 14393850 14393897 chr2R 14393950 14394001 27 98 6.5 6.0 6.2 3.8 151 chr2R 14393850 intergenic not near genes chr2R 14393926 intergenic not near genes chr2R 14394001 intergenic not near genes chr2R_27_14390001 chr2R_14390001 RAL-321 1062 chr2R 14394222 14394227 chr2R 14399031 14399036 Doc 4 4809 17.0 11.0 14.0 0.3 4814 chr2R 14394222 intergenic not near genes chr2R 14396629 intergenic not near genes chr2R 14399036 intergenic not near genes chr2R_4_14395001 chr2R_14395001 RAL-321 1063 chr2R 14467290 14467320 chr2R 14476468 14476498 roo 11 9177 2.5 6.0 4.2 2.1 9208 chr2R 14467290 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476498 5` UTR CR44462 + chr2R_11_14470001 chr2R_14470001 RAL-321 1064 chr2R 14497370 14497420 chr2R 14498553 14498575 1360 16 1181 0.0 4.5 2.2 5.0 1205 chr2R 14497370 3` UTR Cpsf160 - chr2R 14497972 intron Cpsf160 - chr2R 14498575 3` UTR Cpsf160 - chr2R_16_14495001 chr2R_14495001 RAL-321 1065 chr2R 14530358 14530379 chr2R 14530467 14530488 12 108 8.5 7.5 8.0 1.3 130 chr2R 14530358 intron ttv + chr2R 14530423 intron ttv + chr2R 14530488 intron ttv + chr2R_12_14530001 chr2R_14530001 RAL-321 1066 chr2R 14530726 14530776 chr2R 14530828 14530878 16 99 4.5 6.0 5.2 2.6 152 chr2R 14530726 intron ttv + chr2R 14530802 intron ttv + chr2R 14530878 intron ttv + chr2R_16_14530001 chr2R_14530001 RAL-321 1067 chr2R 14541210 14541254 chr2R 14541487 14541531 9 277 6.0 3.5 4.8 1.6 321 chr2R 14541210 intron ttv + chr2R 14541370 intron ttv + chr2R 14541531 intron ttv + chr2R_9_14540001 chr2R_14540001 RAL-321 1068 chr2R 14565540 14565594 chr2R 14565637 14565691 25 97 9.5 6.5 8.0 2.8 151 chr2R 14565540 intron ttv + chr2R 14565616 intron ttv + chr2R 14565691 intron ttv + chr2R_25_14565001 chr2R_14565001 RAL-321 1069 chr2R 14610225 14610271 chr2R 14610337 14610383 19 109 6.5 5.5 6.0 2.7 158 chr2R 14610225 exon Su(var)2-HP2 - chr2R 14610304 exon Su(var)2-HP2 - chr2R 14610383 exon Su(var)2-HP2 - chr2R_19_14610001 chr2R_14610001 RAL-321 1070 chr2R 14737610 14737633 chr2R 14737714 14737720 7 101 9.5 9.0 9.2 0.7 110 chr2R 14737610 3` UTR CR43428 - chr2R 14737665 3` UTR CR43428 - chr2R 14737720 3` UTR CR43428 - chr2R_7_14735001 chr2R_14735001 RAL-321 1071 chr2R 14799866 14799896 chr2R 14799962 14799992 16 95 3.5 10.5 7.0 2.0 126 chr2R 14799866 intron kn - chr2R 14799929 intron kn - chr2R 14799992 intron kn - chr2R_16_14795001 chr2R_14795001 RAL-321 1072 chr2R 14842374 14842391 chr2R 14842490 14842507 5 116 5.5 6.0 5.8 0.7 133 chr2R 14842374 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842507 intergenic NaPi-T - chr2R_5_14840001 chr2R_14840001 RAL-321 1073 chr2R 14855008 14855045 chr2R 14855121 14855157 7 110 8.0 0.0 4.0 1.4 149 chr2R 14855008 5` UTR Ciao1 - chr2R 14855082 intergenic Ciao1 -,HPS1 + chr2R 14855157 intergenic Ciao1 -,HPS1 + chr2R_7_14855001 chr2R_14855001 RAL-321 1074 chr2R 14889193 14889216 chr2R 14897821 14897844 Max-element 14 8628 14.0 0.5 7.2 1.7 8651 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_14_14890001 chr2R_14890001 RAL-321 1075 chr2R 14906466 14906508 chr2R 14906596 14906638 14 130 7.0 7.0 7.0 1.8 172 chr2R 14906466 intron CG10249 - chr2R 14906552 intron CG10249 - chr2R 14906638 intron CG10249 - chr2R_14_14905001 chr2R_14905001 RAL-321 1076 chr2R 14911682 14911726 chr2R 14911825 14911869 27 142 4.5 6.0 5.2 4.4 187 chr2R 14911682 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911869 intron CG10249 - chr2R_27_14910001 chr2R_14910001 RAL-321 1077 chr2R 14917829 14917883 chr2R 14917934 14917988 22 104 4.0 6.5 5.2 3.5 159 chr2R 14917829 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917988 intron CG10249 - chr2R_22_14915001 chr2R_14915001 RAL-321 1078 chr2R 14919074 14919089 chr2R 14919175 14919190 5 101 15.5 0.0 7.8 0.6 116 chr2R 14919074 intron CG10249 - chr2R 14919132 intron CG10249 - chr2R 14919190 intron CG10249 - chr2R_5_14915001 chr2R_14915001 RAL-321 1079 chr2R 14922121 14922171 chr2R 14922217 14922257 25 94 7.5 4.5 6.0 3.6 136 chr2R 14922121 intron CG10249 - chr2R 14922189 intron CG10249 - chr2R 14922257 intron CG10249 - chr2R_25_14920001 chr2R_14920001 RAL-321 1080 chr2R 14985434 14985478 chr2R 14985530 14985563 13 92 3.0 5.5 4.2 2.5 129 chr2R 14985434 intron pcs + chr2R 14985498 intron pcs + chr2R 14985563 intron pcs + chr2R_13_14985001 chr2R_14985001 RAL-321 1081 chr2R 14998498 14998510 chr2R 14998656 14998670 7 160 3.0 9.0 6.0 1.0 172 chr2R 14998498 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998670 intergenic not near genes chr2R_7_14995001 chr2R_14995001 RAL-321 1082 chr2R 15004715 15004753 chr2R 15005056 15005102 jockey 24 348 5.5 8.5 7.0 3.0 387 chr2R 15004715 intergenic not near genes chr2R 15004908 intergenic not near genes chr2R 15005102 intergenic not near genes chr2R_24_15000001 chr2R_15000001 RAL-321 1083 chr2R 15015453 15015488 chr2R 15022888 15022932 mdg1 20 7442 7.0 6.0 6.5 2.7 7479 chr2R 15015453 intron hbs + chr2R 15019192 intron hbs + chr2R 15022932 intron hbs + chr2R_20_15015001 chr2R_15015001 RAL-321 1084 chr2R 15027473 15027499 chr2R 15027581 15027607 4 108 8.5 5.0 6.8 0.5 134 chr2R 15027473 intron hbs + chr2R 15027540 intron hbs + chr2R 15027607 intron hbs + chr2R_4_15025001 chr2R_15025001 RAL-321 1085 chr2R 15027506 15027515 chr2R 15027578 15027608 5 92 5.0 5.0 5.0 0.8 102 chr2R 15027506 intron hbs + chr2R 15027557 intron hbs + chr2R 15027608 intron hbs + chr2R_5_15025001 chr2R_15025001 RAL-321 1086 chr2R 15027518 15027519 chr2R 15027573 15027607 5 74 5.0 4.5 4.8 0.9 89 chr2R 15027518 intron hbs + chr2R 15027562 intron hbs + chr2R 15027607 intron hbs + chr2R_5_15025001 chr2R_15025001 RAL-321 1087 chr2R 15074781 15074829 chr2R 15075062 15075110 20 280 7.5 6.0 6.8 2.6 329 chr2R 15074781 intergenic not near genes chr2R 15074946 intergenic not near genes chr2R 15075110 intergenic not near genes chr2R_20_15070001 chr2R_15070001 RAL-321 1088 chr2R 15084957 15085001 chr2R 15092026 15092070 297 21 7069 5.0 4.0 4.5 3.8 7113 chr2R 15084957 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092070 5` UTR CR44457 + chr2R_21_15085001 chr2R_15085001 RAL-321 1089 chr2R 15092394 15092435 chr2R 15092504 15092545 24 110 5.5 8.0 6.8 3.1 151 chr2R 15092394 5` UTR CR44457 + chr2R 15092470 intergenic CR44457 + chr2R 15092545 intergenic CR44457 + chr2R_24_15090001 chr2R_15090001 RAL-321 1090 chr2R 15119296 15119349 chr2R 15127797 15127845 Tirant 9 8498 5.0 4.5 4.8 1.6 8549 chr2R 15119296 intron chn + chr2R 15123570 intron chn + chr2R 15127845 intron chn + chr2R_9_15120001 chr2R_15120001 RAL-321 1091 chr2R 15133465 15133512 chr2R 15133564 15133611 16 98 4.0 5.0 4.5 2.9 146 chr2R 15133465 intron chn + chr2R 15133538 intron chn + chr2R 15133611 intron chn + chr2R_16_15130001 chr2R_15130001 RAL-321 1092 chr2R 15134299 15134308 chr2R 15134396 15134404 4 97 0.0 14.0 7.0 0.5 105 chr2R 15134299 intron chn + chr2R 15134352 intron chn + chr2R 15134404 intron chn + chr2R_4_15130001 chr2R_15130001 RAL-321 1093 chr2R 15134310 15134325 chr2R 15134378 15134422 10 87 0.5 10.0 5.2 1.6 112 chr2R 15134310 intron chn + chr2R 15134366 intron chn + chr2R 15134422 intron chn + chr2R_10_15130001 chr2R_15130001 RAL-321 1094 chr2R 15137947 15137995 chr2R 15138047 15138089 19 99 10.5 0.5 5.5 2.9 142 chr2R 15137947 intron chn + chr2R 15138018 intron chn + chr2R 15138089 intron chn + chr2R_19_15135001 chr2R_15135001 RAL-321 1095 chr2R 15163489 15163501 chr2R 15163597 15163604 4 107 13.0 4.5 8.8 0.4 115 chr2R 15163489 intron igl + chr2R 15163546 intron igl + chr2R 15163604 intron igl + chr2R_4_15160001 chr2R_15160001 RAL-321 1096 chr2R 15230353 15230369 chr2R 15230671 15230676 9 308 34.0 0.0 17.0 0.5 323 chr2R 15230353 intron,5` UTR Fs -,CR44370 + chr2R 15230514 intron,5` UTR Fs -,CR44370 + chr2R 15230676 intron,5` UTR Fs -,CR44370 + chr2R_9_15230001 chr2R_15230001 RAL-321 1097 chr2R 15259045 15259089 chr2R 15259149 15259193 18 104 8.0 4.0 6.0 2.6 148 chr2R 15259045 intron ItgalphaPS4 + chr2R 15259119 intron ItgalphaPS4 + chr2R 15259193 intron ItgalphaPS4 + chr2R_18_15255001 chr2R_15255001 RAL-321 1098 chr2R 15294660 15294709 chr2R 15294762 15294811 21 98 6.5 5.0 5.8 3.1 151 chr2R 15294660 intron,3` UTR Trpm -,CR44241 - chr2R 15294736 intron,3` UTR Trpm -,CR44241 - chr2R 15294811 intron,3` UTR Trpm -,CR44241 - chr2R_21_15290001 chr2R_15290001 RAL-321 1099 chr2R 15296143 15296169 chr2R 15296246 15296272 7 101 7.5 8.0 7.8 0.8 129 chr2R 15296143 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296272 intron Trpm - chr2R_7_15295001 chr2R_15295001 RAL-321 1100 chr2R 15340279 15340328 chr2R 15340376 15340425 16 93 3.5 5.5 4.5 2.9 146 chr2R 15340279 intergenic unc-5 + chr2R 15340352 intergenic unc-5 + chr2R 15340425 intergenic unc-5 + chr2R_16_15340001 chr2R_15340001 RAL-321 1101 chr2R 15373824 15373876 chr2R 15374003 15374055 26 178 8.5 9.0 8.8 2.7 231 chr2R 15373824 intergenic not near genes chr2R 15373940 intergenic not near genes chr2R 15374055 intergenic not near genes chr2R_26_15370001 chr2R_15370001 RAL-321 1102 chr2R 15375061 15375070 chr2R 15375936 15375945 7 874 6.0 51.5 28.8 0.2 884 chr2R 15375061 intergenic not near genes chr2R 15375503 intergenic not near genes chr2R 15375945 intergenic not near genes chr2R_7_15375001 chr2R_15375001 RAL-321 1103 chr2R 15593295 15593305 chr2R 15593400 15593410 6 105 13.5 19.0 16.2 0.3 115 chr2R 15593295 intergenic not near genes chr2R 15593352 intergenic not near genes chr2R 15593410 intergenic not near genes chr2R_6_15590001 chr2R_15590001 RAL-321 1104 chr2R 15645676 15645687 chr2R 15645786 15645803 5 112 8.5 0.5 4.5 0.9 127 chr2R 15645676 intron CG42524 + chr2R 15645740 intron CG42524 + chr2R 15645803 intron CG42524 + chr2R_5_15645001 chr2R_15645001 RAL-321 1105 chr2R 15652562 15652577 chr2R 15652668 15652683 6 107 13.5 14.0 13.8 0.4 121 chr2R 15652562 intron CG42524 + chr2R 15652622 intron CG42524 + chr2R 15652683 intron CG42524 + chr2R_6_15650001 chr2R_15650001 RAL-321 1106 chr2R 15656012 15656068 chr2R 15656123 15656179 5 109 0.5 5.0 2.8 1.3 167 chr2R 15656012 intron CG42524 + chr2R 15656096 intron CG42524 + chr2R 15656179 intron CG42524 + chr2R_5_15655001 chr2R_15655001 RAL-321 1107 chr2R 15697878 15697919 chr2R 15697979 15698015 19 100 6.5 0.0 3.2 4.5 137 chr2R 15697878 exon CG33462 + chr2R 15697946 3` UTR CG33462 + chr2R 15698015 intergenic CG33462 + chr2R_19_15695001 chr2R_15695001 RAL-321 1108 chr2R 15749273 15749323 chr2R 15749377 15749427 19 101 2.0 3.5 2.8 5.0 154 chr2R 15749273 intron CG30089 + chr2R 15749350 intron CG30089 + chr2R 15749427 intron CG30089 + chr2R_19_15745001 chr2R_15745001 RAL-321 1109 chr2R 15833515 15833550 chr2R 15833609 15833642 15 100 6.0 3.5 4.8 2.6 127 chr2R 15833515 intron,intron tun +,Poxn - chr2R 15833578 intron,intron tun +,Poxn - chr2R 15833642 intron,intron tun +,Poxn - chr2R_15_15830001 chr2R_15830001 RAL-321 1110 chr2R 15863917 15863955 chr2R 15864030 15864068 13 113 10.5 2.0 6.2 1.8 151 chr2R 15863917 intergenic Rif1 - chr2R 15863992 intergenic Rif1 - chr2R 15864068 intergenic Rif1 - chr2R_13_15860001 chr2R_15860001 RAL-321 1111 chr2R 15930365 15930368 chr2R 15930462 15930465 4 97 13.5 0.0 6.8 0.5 100 chr2R 15930365 intron bdg - chr2R 15930415 intron bdg - chr2R 15930465 intron bdg - chr2R_4_15930001 chr2R_15930001 RAL-321 1112 chr2R 15943038 15943076 chr2R 15943200 15943239 14 161 8.5 7.5 8.0 1.6 201 chr2R 15943038 5` UTR Cyp4aa1 + chr2R 15943138 intron Cyp4aa1 + chr2R 15943239 intron Cyp4aa1 + chr2R_14_15940001 chr2R_15940001 RAL-321 1113 chr2R 16007824 16007876 chr2R 16007922 16007974 30 97 8.0 7.5 7.8 3.4 150 chr2R 16007824 intergenic CG8386 - chr2R 16007899 intergenic CG8386 -,CG8389 + chr2R 16007974 intergenic CG8386 -,CG8389 + chr2R_30_16005001 chr2R_16005001 RAL-321 1114 chr2R 16054931 16054954 chr2R 16055034 16055034 8 98 10.5 12.0 11.2 0.7 103 chr2R 16054931 intron CG8405 + chr2R 16054982 intron CG8405 + chr2R 16055034 intron CG8405 + chr2R_8_16050001 chr2R_16050001 RAL-321 1115 chr2R 16061711 16061717 chr2R 16064364 16064368 Burdock 4 2652 12.5 6.5 9.5 0.4 2657 chr2R 16061711 intergenic not near genes chr2R 16063040 intergenic not near genes chr2R 16064368 intergenic not near genes chr2R_4_16060001 chr2R_16060001 RAL-321 1116 chr2R 16206629 16206677 chr2R 16206849 16206898 18 218 0.5 5.5 3.0 4.5 269 chr2R 16206629 intron mrj - chr2R 16206764 intron mrj - chr2R 16206898 intron mrj - chr2R_18_16205001 chr2R_16205001 RAL-321 1117 chr2R 16245414 16245621 chr2R 16245507 16245729 13 112 30.0 3.5 16.8 0.7 315 chr2R 16245414 intron CngA - chr2R 16245572 intron CngA - chr2R 16245729 intron CngA - chr2R_13_16245001 chr2R_16245001 RAL-321 1118 chr2R 16279355 16279409 chr2R 16279460 16279514 9 105 0.0 4.0 2.0 3.0 159 chr2R 16279355 intergenic not near genes chr2R 16279434 intergenic not near genes chr2R 16279514 intergenic CG15704 + chr2R_9_16275001 chr2R_16275001 RAL-321 1119 chr2R 16352846 16352871 chr2R 16352949 16352974 9 103 6.5 9.0 7.8 1.0 128 chr2R 16352846 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16352974 intergenic not near genes chr2R_9_16350001 chr2R_16350001 RAL-321 1120 chr2R 16374558 16374602 chr2R 16374663 16374706 6 105 0.0 8.0 4.0 1.2 148 chr2R 16374558 intergenic not near genes chr2R 16374632 intergenic not near genes chr2R 16374706 intergenic not near genes chr2R_6_16370001 chr2R_16370001 RAL-321 1121 chr2R 16380111 16380148 chr2R 16380224 16380265 11 117 4.0 4.5 4.2 2.1 154 chr2R 16380111 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380188 3` UTR CR45317 - chr2R 16380265 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_11_16380001 chr2R_16380001 RAL-321 1122 chr2R 16392303 16392328 chr2R 16392407 16392432 11 101 8.0 4.0 6.0 1.6 129 chr2R 16392303 intron Sema-2b + chr2R 16392368 intron Sema-2b + chr2R 16392432 intron Sema-2b + chr2R_11_16390001 chr2R_16390001 RAL-321 1123 chr2R 16436659 16436675 chr2R 16436748 16436764 6 94 7.5 5.5 6.5 0.8 105 chr2R 16436659 intergenic not near genes chr2R 16436712 intergenic not near genes chr2R 16436764 intergenic not near genes chr2R_6_16435001 chr2R_16435001 RAL-321 1124 chr2R 16436678 16436700 chr2R 16436746 16436770 10 78 4.0 5.5 4.8 1.7 92 chr2R 16436678 intergenic not near genes chr2R 16436724 intergenic not near genes chr2R 16436770 intergenic not near genes chr2R_10_16435001 chr2R_16435001 RAL-321 1125 chr2R 16458007 16458019 chr2R 16458107 16458119 5 100 8.0 0.0 4.0 1.0 112 chr2R 16458007 intergenic not near genes chr2R 16458063 intergenic not near genes chr2R 16458119 intergenic not near genes chr2R_5_16455001 chr2R_16455001 RAL-321 1126 chr2R 16544851 16544869 chr2R 16544942 16544974 10 104 0.0 0.0 0.0 10.0 123 chr2R 16544851 intergenic not near genes chr2R 16544912 intergenic not near genes chr2R 16544974 intergenic not near genes chr2R_10_16540001 chr2R_16540001 RAL-321 1127 chr2R 16546979 16547016 chr2R 16547079 16547116 8 99 0.0 0.0 0.0 8.0 137 chr2R 16546979 intergenic not near genes chr2R 16547048 intergenic not near genes chr2R 16547116 intergenic not near genes chr2R_8_16545001 chr2R_16545001 RAL-321 1128 chr2R 16571852 16571902 chr2R 16571967 16572017 25 115 4.5 3.5 4.0 5.0 165 chr2R 16571852 intergenic CG4927 + chr2R 16571934 intergenic CG4927 + chr2R 16572017 intergenic CG4927 + chr2R_25_16570001 chr2R_16570001 RAL-321 1129 chr2R 16617059 16617082 chr2R 16617153 16617181 11 98 8.0 6.0 7.0 1.4 122 chr2R 16617059 intron CG5065 + chr2R 16617120 intron CG5065 + chr2R 16617181 intron CG5065 + chr2R_11_16615001 chr2R_16615001 RAL-321 1130 chr2R 16618699 16618741 chr2R 16618795 16618837 16 93 0.0 6.0 3.0 4.0 138 chr2R 16618699 intron CG5065 + chr2R 16618768 intron CG5065 + chr2R 16618837 5` UTR CG5065 + chr2R_16_16615001 chr2R_16615001 RAL-321 1131 chr2R 16681219 16681224 chr2R 16681324 16681330 6 106 9.0 5.0 7.0 0.8 111 chr2R 16681219 intron CG30463 - chr2R 16681274 intron CG30463 - chr2R 16681330 intron CG30463 - chr2R_6_16680001 chr2R_16680001 RAL-321 1132 chr2R 16681225 16681267 chr2R 16681321 16681373 22 104 6.0 5.0 5.5 3.4 148 chr2R 16681225 intron CG30463 - chr2R 16681299 intron CG30463 - chr2R 16681373 intron CG30463 - chr2R_22_16680001 chr2R_16680001 RAL-321 1133 chr2R 16689137 16689173 chr2R 16689481 16689522 11 345 4.0 4.5 4.2 2.1 385 chr2R 16689137 intron CG30463 - chr2R 16689330 intron CG30463 - chr2R 16689522 intron CG30463 - chr2R_11_16685001 chr2R_16685001 RAL-321 1134 chr2R 16738237 16738286 chr2R 16738364 16738413 18 127 3.5 3.5 3.5 4.0 176 chr2R 16738237 5` UTR CR44464 + chr2R 16738325 5` UTR CR44464 + chr2R 16738413 intergenic CR44464 + chr2R_18_16735001 chr2R_16735001 RAL-321 1135 chr2R 16743255 16743258 chr2R 16743360 16743362 4 104 5.5 1.5 3.5 0.9 107 chr2R 16743255 intergenic not near genes chr2R 16743308 intergenic not near genes chr2R 16743362 intergenic not near genes chr2R_4_16740001 chr2R_16740001 RAL-321 1136 chr2R 16775636 16775674 chr2R 16775923 16775961 18 286 5.0 10.5 7.8 2.0 325 chr2R 16775636 3` UTR Arp53D + chr2R 16775798 intergenic Arp53D + chr2R 16775961 intergenic Arp53D + chr2R_18_16775001 chr2R_16775001 RAL-321 1137 chr2R 16787454 16787498 chr2R 16787556 16787600 23 102 6.5 2.5 4.5 4.2 146 chr2R 16787454 intron CG5522 + chr2R 16787527 intron CG5522 + chr2R 16787600 intron CG5522 + chr2R_23_16785001 chr2R_16785001 RAL-321 1138 chr2R 16828478 16828494 chr2R 16828577 16828593 5 99 0.0 7.5 3.8 1.0 115 chr2R 16828478 intergenic not near genes chr2R 16828536 intergenic not near genes chr2R 16828593 intergenic not near genes chr2R_5_16825001 chr2R_16825001 RAL-321 1139 chr2R 16880015 16880063 chr2R 16880112 16880160 12 97 7.0 0.5 3.8 2.5 145 chr2R 16880015 intron CG8910 - chr2R 16880088 intron CG8910 - chr2R 16880160 intron CG8910 - chr2R_12_16880001 chr2R_16880001 RAL-321 1140 chr2R 16910214 16910246 chr2R 16910333 16910365 22 117 3.0 4.5 3.8 4.6 151 chr2R 16910214 intergenic not near genes chr2R 16910290 intergenic not near genes chr2R 16910365 intergenic not near genes chr2R_22_16910001 chr2R_16910001 RAL-321 1141 chr2R 16930609 16930625 chr2R 16930707 16930723 8 98 0.0 6.5 3.2 1.9 114 chr2R 16930609 intron Pkc53E + chr2R 16930666 intron Pkc53E + chr2R 16930723 intron Pkc53E + chr2R_8_16930001 chr2R_16930001 RAL-321 1142 chr2R 17070742 17070786 chr2R 17070860 17070909 26 123 5.0 6.0 5.5 4.0 167 chr2R 17070742 intron CG30460 - chr2R 17070826 intron CG30460 - chr2R 17070909 intron CG30460 - chr2R_26_17070001 chr2R_17070001 RAL-321 1143 chr2R 17098646 17098658 chr2R 17098742 17098767 9 106 11.0 13.5 12.2 0.7 121 chr2R 17098646 intergenic GstS1 - chr2R 17098706 intergenic GstS1 - chr2R 17098767 intergenic GstS1 - chr2R_9_17095001 chr2R_17095001 RAL-321 1144 chr2R 17132838 17132869 chr2R 17132958 17132989 18 119 8.0 9.0 8.5 1.9 151 chr2R 17132838 intergenic not near genes chr2R 17132914 intergenic not near genes chr2R 17132989 intergenic Acp54A1 + chr2R_18_17130001 chr2R_17130001 RAL-321 1145 chr2R 17144115 17144170 chr2R 17144218 17144273 28 101 5.0 5.0 5.0 4.7 158 chr2R 17144115 intergenic snoRNA:U3:54Aa -,snoRNA:U3:54Ab - chr2R 17144194 intergenic not near genes chr2R 17144273 intergenic not near genes chr2R_28_17140001 chr2R_17140001 RAL-321 1146 chr2R 17147224 17147233 chr2R 17152275 17152284 jockey 8 5051 19.5 12.0 15.8 0.5 5060 chr2R 17147224 intergenic not near genes chr2R 17149754 intergenic not near genes chr2R 17152284 intergenic not near genes chr2R_8_17145001 chr2R_17145001 RAL-321 1147 chr2R 17147234 17147263 chr2R 17152274 17152314 jockey 11 5050 9.5 12.0 10.8 0.9 5080 chr2R 17147234 intergenic not near genes chr2R 17149774 intergenic not near genes chr2R 17152314 intergenic not near genes chr2R_11_17145001 chr2R_17145001 RAL-321 1148 chr2R 17153872 17153913 chr2R 17153970 17154011 17 98 6.5 3.5 5.0 2.8 139 chr2R 17153872 intergenic not near genes chr2R 17153942 intergenic not near genes chr2R 17154011 intergenic not near genes chr2R_17_17150001 chr2R_17150001 RAL-321 1149 chr2R 17176361 17176386 chr2R 17182565 17182596 diver 10 6208 0.0 10.0 5.0 1.7 6235 chr2R 17176361 intergenic not near genes chr2R 17179478 intergenic not near genes chr2R 17182596 intergenic not near genes chr2R_10_17175001 chr2R_17175001 RAL-321 1150 chr2R 17236488 17236536 chr2R 17241710 17241760 copia 14 5222 6.0 7.5 6.8 1.8 5272 chr2R 17236488 intron mbl + chr2R 17239124 intron mbl + chr2R 17241760 intron mbl + chr2R_14_17235001 chr2R_17235001 RAL-321 1151 chr2R 17273073 17273127 chr2R 17273176 17273230 25 101 3.5 3.0 3.2 6.0 157 chr2R 17273073 intron mbl + chr2R 17273152 intron mbl + chr2R 17273230 intron mbl + chr2R_25_17270001 chr2R_17270001 RAL-321 1152 chr2R 17319114 17319140 chr2R 17319355 17319401 9 257 3.0 1.0 2.0 3.0 287 chr2R 17319114 intron mbl + chr2R 17319258 intron mbl + chr2R 17319401 intron mbl + chr2R_9_17315001 chr2R_17315001 RAL-321 1153 chr2R 17419919 17419963 chr2R 17420023 17420061 10 102 0.0 4.5 2.2 3.1 142 chr2R 17419919 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420061 intergenic cnk -,l(2)k01209 + chr2R_10_17415001 chr2R_17415001 RAL-321 1154 chr2R 17438001 17438054 chr2R 17438098 17438151 25 97 7.5 7.0 7.2 3.0 150 chr2R 17438001 intron EDTP - chr2R 17438076 intron EDTP - chr2R 17438151 intron EDTP - chr2R_25_17435001 chr2R_17435001 RAL-321 1155 chr2R 17443755 17443802 chr2R 17443851 17443898 24 95 4.5 2.5 3.5 5.3 143 chr2R 17443755 intron EDTP - chr2R 17443826 intron EDTP - chr2R 17443898 intron EDTP - chr2R_24_17440001 chr2R_17440001 RAL-321 1156 chr2R 17485898 17485946 chr2R 17490680 17490726 F-element 15 4780 12.5 6.0 9.2 1.5 4828 chr2R 17485898 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490726 intron NT5E-2 + chr2R_15_17485001 chr2R_17485001 RAL-321 1157 chr2R 17500674 17500686 chr2R 17500770 17500782 4 96 1.0 13.0 7.0 0.5 108 chr2R 17500674 intergenic not near genes chr2R 17500728 intergenic not near genes chr2R 17500782 intergenic not near genes chr2R_4_17500001 chr2R_17500001 RAL-321 1158 chr2R 17642333 17642384 chr2R 17644447 17644498 21 2115 49.5 48.5 49.0 0.4 2165 chr2R 17642333 intergenic not near genes chr2R 17643416 intergenic not near genes chr2R 17644498 intergenic not near genes chr2R_21_17640001 chr2R_17640001 RAL-321 1159 chr2R 17679581 17679602 chr2R 17679728 17679749 4 147 0.5 4.5 2.5 1.1 168 chr2R 17679581 intron Sema-1b - chr2R 17679665 intron Sema-1b - chr2R 17679749 intron Sema-1b - chr2R_4_17675001 chr2R_17675001 RAL-321 1160 chr2R 17708379 17708421 chr2R 17708480 17708522 18 101 5.5 7.5 6.5 2.4 143 chr2R 17708379 intron CG6424 - chr2R 17708450 intron CG6424 - chr2R 17708522 intron CG6424 - chr2R_18_17705001 chr2R_17705001 RAL-321 1161 chr2R 17709965 17710117 chr2R 17710076 17710215 29 104 0.0 0.0 0.0 29.0 250 chr2R 17709965 intron CG6424 - chr2R 17710090 intron CG6424 - chr2R 17710215 intron CG6424 - chr2R_29_17710001 chr2R_17710001 RAL-321 1162 chr2R 17782344 17782394 chr2R 17783567 17783617 pogo 15 1222 3.5 1.5 2.5 4.3 1273 chr2R 17782344 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_15_17780001 chr2R_17780001 RAL-321 1163 chr2R 17784004 17784055 chr2R 17784265 17784316 pogo 18 258 5.0 5.5 5.2 2.9 312 chr2R 17784004 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784316 intergenic mir-31a - chr2R_18_17780001 chr2R_17780001 RAL-321 1164 chr2R 17794769 17794781 chr2R 17794868 17794880 6 97 0.0 2.5 1.2 2.7 111 chr2R 17794769 intron Dhit + chr2R 17794824 intron Dhit + chr2R 17794880 intron Dhit + chr2R_6_17790001 chr2R_17790001 RAL-321 1165 chr2R 17795622 17795627 chr2R 17795741 17795746 4 119 11.0 0.0 5.5 0.6 124 chr2R 17795622 intron Dhit + chr2R 17795684 intron Dhit + chr2R 17795746 intron Dhit + chr2R_4_17795001 chr2R_17795001 RAL-321 1166 chr2R 17876329 17876371 chr2R 17876580 17876621 17 250 3.0 8.0 5.5 2.6 292 chr2R 17876329 intron Elk + chr2R 17876475 intron Elk + chr2R 17876621 intron Elk + chr2R_17_17875001 chr2R_17875001 RAL-321 1167 chr2R 17918140 17918188 chr2R 17918237 17918275 18 90 6.0 2.0 4.0 3.6 135 chr2R 17918140 intron Elk + chr2R 17918208 intron Elk + chr2R 17918275 intron Elk + chr2R_18_17915001 chr2R_17915001 RAL-321 1168 chr2R 17921420 17921470 chr2R 17921523 17921572 4 102 3.0 3.5 3.2 1.0 152 chr2R 17921420 intron Elk + chr2R 17921496 intron Elk + chr2R 17921572 intron Elk + chr2R_4_17920001 chr2R_17920001 RAL-321 1169 chr2R 17929105 17929146 chr2R 17929218 17929259 8 109 5.5 4.0 4.8 1.4 154 chr2R 17929105 intergenic not near genes chr2R 17929182 intergenic not near genes chr2R 17929259 intergenic not near genes chr2R_8_17925001 chr2R_17925001 RAL-321 1170 chr2R 17960153 17960173 chr2R 17960258 17960273 9 104 4.0 7.0 5.5 1.4 120 chr2R 17960153 intergenic not near genes chr2R 17960213 intergenic not near genes chr2R 17960273 intergenic not near genes chr2R_9_17960001 chr2R_17960001 RAL-321 1171 chr2R 17982909 17982949 chr2R 17983014 17983039 18 102 8.0 5.0 6.5 2.4 130 chr2R 17982909 intron dpr13 - chr2R 17982974 intron dpr13 - chr2R 17983039 intron dpr13 - chr2R_18_17980001 chr2R_17980001 RAL-321 1172 chr2R 17990750 17990799 chr2R 17990919 17990968 25 168 5.0 4.5 4.8 4.3 218 chr2R 17990750 intron dpr13 - chr2R 17990859 intron dpr13 - chr2R 17990968 intron dpr13 - chr2R_25_17990001 chr2R_17990001 RAL-321 1173 chr2R 18045653 18045663 chr2R 18046025 18046035 jockey 8 372 13.5 7.5 10.5 0.7 382 chr2R 18045653 intergenic not near genes chr2R 18045844 intergenic not near genes chr2R 18046035 intergenic CG5767 - chr2R_8_18045001 chr2R_18045001 RAL-321 1174 chr2R 18045665 18045698 chr2R 18046022 18046070 jockey 15 371 7.0 7.0 7.0 1.9 405 chr2R 18045665 intergenic not near genes chr2R 18045868 intergenic not near genes chr2R 18046070 intergenic CG5767 - chr2R_15_18045001 chr2R_18045001 RAL-321 1175 chr2R 18069893 18069902 chr2R 18069987 18070004 8 101 13.5 4.0 8.8 0.8 111 chr2R 18069893 intron CG34386 + chr2R 18069948 intron CG34386 + chr2R 18070004 intron CG34386 + chr2R_8_18065001 chr2R_18065001 RAL-321 1176 chr2R 18069903 18069934 chr2R 18069982 18070036 15 95 7.5 3.5 5.5 2.3 133 chr2R 18069903 intron CG34386 + chr2R 18069970 intron CG34386 + chr2R 18070036 intron CG34386 + chr2R_15_18065001 chr2R_18065001 RAL-321 1177 chr2R 18074584 18074619 chr2R 18074680 18074715 15 96 4.5 4.0 4.2 2.9 131 chr2R 18074584 intron CG34386 + chr2R 18074650 intron CG34386 + chr2R 18074715 intron CG34386 + chr2R_15_18070001 chr2R_18070001 RAL-321 1178 chr2R 18111669 18111713 chr2R 18115557 18115601 F-element 24 3888 8.0 0.5 4.2 4.6 3932 chr2R 18111669 intergenic not near genes chr2R 18113635 intergenic not near genes chr2R 18115601 intergenic not near genes chr2R_24_18110001 chr2R_18110001 RAL-321 1179 chr2R 18124318 18124373 chr2R 18124415 18124469 29 95 6.5 5.0 5.8 4.3 151 chr2R 18124318 intron stau - chr2R 18124394 intron stau - chr2R 18124469 intron stau - chr2R_29_18120001 chr2R_18120001 RAL-321 1180 chr2R 18224582 18224621 chr2R 18224683 18224719 10 96 4.0 9.5 6.8 1.3 137 chr2R 18224582 intergenic not near genes chr2R 18224650 intergenic not near genes chr2R 18224719 intergenic not near genes chr2R_10_18220001 chr2R_18220001 RAL-321 1181 chr2R 18287995 18288024 chr2R 18288108 18288137 12 113 10.0 6.0 8.0 1.3 142 chr2R 18287995 intron sbb - chr2R 18288066 intron sbb - chr2R 18288137 exon sbb - chr2R_12_18285001 chr2R_18285001 RAL-321 1182 chr2R 18308262 18308316 chr2R 18308388 18308442 22 126 6.5 5.5 6.0 3.1 180 chr2R 18308262 intron sbb - chr2R 18308352 intron sbb - chr2R 18308442 intron sbb - chr2R_22_18305001 chr2R_18305001 RAL-321 1183 chr2R 18358376 18358416 chr2R 18372608 18372648 roo 19 14231 5.0 10.5 7.8 2.2 14272 chr2R 18358376 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372648 intergenic not near genes chr2R_19_18365001 chr2R_18365001 RAL-321 1184 chr2R 18376714 18376755 chr2R 18376824 18376840 17 108 7.0 9.0 8.0 1.9 126 chr2R 18376714 intergenic not near genes chr2R 18376777 intergenic not near genes chr2R 18376840 intergenic not near genes chr2R_17_18375001 chr2R_18375001 RAL-321 1185 chr2R 18432184 18432224 chr2R 18432286 18432325 15 102 8.5 8.5 8.5 1.6 141 chr2R 18432184 intron CG30118 - chr2R 18432254 intron CG30118 - chr2R 18432325 intron CG30118 - chr2R_15_18430001 chr2R_18430001 RAL-321 1186 chr2R 18471898 18471928 chr2R 18471994 18472024 7 96 4.5 2.0 3.2 1.7 126 chr2R 18471898 intron CG30116 - chr2R 18471961 intron CG30116 - chr2R 18472024 intron CG30116 - chr2R_7_18470001 chr2R_18470001 RAL-321 1187 chr2R 18487818 18487850 chr2R 18495289 18495340 blood 8 7475 0.5 7.0 3.8 1.7 7522 chr2R 18487818 intron CG30116 - chr2R 18491579 intron CG30116 - chr2R 18495340 intron CG30116 - chr2R_8_18490001 chr2R_18490001 RAL-321 1188 chr2R 18528185 18528219 chr2R 18528277 18528324 14 96 9.5 3.0 6.2 1.9 139 chr2R 18528185 intron CG10924 + chr2R 18528254 intron CG10924 + chr2R 18528324 intron CG10924 + chr2R_14_18525001 chr2R_18525001 RAL-321 1189 chr2R 18547619 18547666 chr2R 18547720 18547767 21 100 7.5 7.0 7.2 2.6 148 chr2R 18547619 3` UTR Rgk2 + chr2R 18547693 3` UTR Rgk2 + chr2R 18547767 3` UTR Rgk2 + chr2R_21_18545001 chr2R_18545001 RAL-321 1190 chr2R 18575778 18575810 chr2R 18581986 18582018 3S18 10 6207 9.5 7.5 8.5 1.1 6240 chr2R 18575778 intron GEFmeso - chr2R 18578898 intron GEFmeso - chr2R 18582018 intron GEFmeso - chr2R_10_18575001 chr2R_18575001 RAL-321 1191 chr2R 18575811 18575830 chr2R 18581984 18582038 3S18 13 6196 6.0 7.0 6.5 1.7 6227 chr2R 18575811 intron GEFmeso - chr2R 18578924 intron GEFmeso - chr2R 18582038 intron GEFmeso - chr2R_13_18575001 chr2R_18575001 RAL-321 1192 chr2R 18590864 18590898 chr2R 18600017 18600045 roo 16 9168 7.0 2.0 4.5 2.9 9181 chr2R 18590864 intron GEFmeso - chr2R 18595454 intron GEFmeso - chr2R 18600045 intron GEFmeso - chr2R_16_18595001 chr2R_18595001 RAL-321 1193 chr2R 18646412 18646434 chr2R 18646577 18646599 17 165 7.5 9.0 8.2 1.8 187 chr2R 18646412 intron SP2637 - chr2R 18646506 intron SP2637 - chr2R 18646599 intron SP2637 - chr2R_17_18645001 chr2R_18645001 RAL-321 1194 chr2R 18652337 18652353 chr2R 18652430 18652454 12 99 0.5 3.0 1.8 4.3 117 chr2R 18652337 intron SP2637 - chr2R 18652396 intron SP2637 - chr2R 18652454 intron SP2637 - chr2R_12_18650001 chr2R_18650001 RAL-321 1195 chr2R 18749608 18749639 chr2R 18749848 18749876 13 240 6.0 1.5 3.8 2.7 268 chr2R 18749608 intron Hs3st-A + chr2R 18749742 intron Hs3st-A + chr2R 18749876 intron Hs3st-A + chr2R_13_18745001 chr2R_18745001 RAL-321 1196 chr2R 18769609 18769619 chr2R 18769736 18769746 6 127 11.0 10.0 10.5 0.5 137 chr2R 18769609 intron Mctp + chr2R 18769678 intron Mctp + chr2R 18769746 intron Mctp + chr2R_6_18765001 chr2R_18765001 RAL-321 1197 chr2R 18785903 18785945 chr2R 18785995 18786044 17 97 4.5 1.0 2.8 4.5 141 chr2R 18785903 intron CG15080 + chr2R 18785974 intron CG15080 + chr2R 18786044 intron CG15080 + chr2R_17_18785001 chr2R_18785001 RAL-321 1198 chr2R 18808058 18808078 chr2R 18808167 18808187 13 108 0.5 0.0 0.2 10.8 129 chr2R 18808058 intergenic CG15096 - chr2R 18808122 intergenic CG15096 - chr2R 18808187 intergenic CG15096 - chr2R_13_18805001 chr2R_18805001 RAL-321 1199 chr2R 18815240 18815287 chr2R 18815396 18815443 25 156 3.5 3.0 3.2 6.0 203 chr2R 18815240 5` UTR,5` UTR CG15096 -,CR43418 + chr2R 18815342 5` UTR,5` UTR CG15096 -,CR43418 + chr2R 18815443 5` UTR,5` UTR CG15096 -,CR43418 + chr2R_25_18815001 chr2R_18815001 RAL-321 1200 chr2R 18819077 18819111 chr2R 18819205 18819222 16 134 4.5 6.0 5.2 2.6 145 chr2R 18819077 intergenic Phb2 + chr2R 18819150 intergenic Phb2 + chr2R 18819222 intergenic Phb2 + chr2R_16_18815001 chr2R_18815001 RAL-321 1201 chr2R 18827644 18827694 chr2R 18827760 18827810 9 116 0.0 3.5 1.8 3.2 166 chr2R 18827644 intron CG15097 - chr2R 18827727 intron CG15097 - chr2R 18827810 intron CG15097 - chr2R_9_18825001 chr2R_18825001 RAL-321 1202 chr2R 18835876 18835897 chr2R 18835978 18835999 16 102 11.0 0.0 5.5 2.5 123 chr2R 18835876 intron CG15083 + chr2R 18835938 intron CG15083 + chr2R 18835999 intron CG15083 + chr2R_16_18835001 chr2R_18835001 RAL-321 1203 chr2R 18855184 18855195 chr2R 18855269 18855270 4 90 8.5 4.0 6.2 0.6 86 chr2R 18855184 intergenic Jheh1 - chr2R 18855227 intergenic Jheh1 - chr2R 18855270 intergenic Jheh1 -,Jheh2 - chr2R_4_18855001 chr2R_18855001 RAL-321 1204 chr2R 18855196 18855215 chr2R 18855266 18855275 10 71 4.5 2.5 3.5 2.2 79 chr2R 18855196 intergenic Jheh1 - chr2R 18855236 intergenic Jheh1 - chr2R 18855275 intergenic Jheh1 -,Jheh2 - chr2R_10_18855001 chr2R_18855001 RAL-321 1205 chr2R 18858257 18858264 chr2R 18860076 18860103 Bari1 4 1834 8.0 13.0 10.5 0.3 1846 chr2R 18858257 intergenic Jheh2 - chr2R 18859180 intergenic not near genes chr2R 18860103 intergenic Jheh3 - chr2R_4_18855001 chr2R_18855001 RAL-321 1206 chr2R 18862289 18862346 chr2R 18862396 18862486 11 122 0.0 0.0 0.0 11.0 197 chr2R 18862289 intergenic Jheh3 - chr2R 18862388 intergenic Jheh3 -,CG43069 + chr2R 18862486 intergenic CG43069 +,Jheh3 - chr2R_11_18860001 chr2R_18860001 RAL-321 1207 chr2R 18876677 18876731 chr2R 18876787 18876806 19 108 6.5 3.5 5.0 3.2 129 chr2R 18876677 intergenic not near genes chr2R 18876742 intergenic not near genes chr2R 18876806 intergenic not near genes chr2R_19_18875001 chr2R_18875001 RAL-321 1208 chr2R 18992012 18992050 chr2R 18992162 18992211 18 159 10.5 9.5 10.0 1.6 199 chr2R 18992012 intron tn + chr2R 18992112 intron tn + chr2R 18992211 intron tn + chr2R_18_18990001 chr2R_18990001 RAL-321 1209 chr2R 19014597 19014649 chr2R 19014697 19014749 18 99 7.5 4.0 5.8 2.6 152 chr2R 19014597 intergenic not near genes chr2R 19014673 intergenic not near genes chr2R 19014749 intergenic not near genes chr2R_18_19010001 chr2R_19010001 RAL-321 1210 chr2R 19015428 19015448 chr2R 19015523 19015556 7 103 9.0 6.5 7.8 0.8 128 chr2R 19015428 intergenic not near genes chr2R 19015492 intergenic not near genes chr2R 19015556 intergenic not near genes chr2R_7_19015001 chr2R_19015001 RAL-321 1211 chr2R 19015449 19015455 chr2R 19015522 19015563 5 96 7.5 6.5 7.0 0.6 114 chr2R 19015449 intergenic not near genes chr2R 19015506 intergenic not near genes chr2R 19015563 intergenic not near genes chr2R_5_19015001 chr2R_19015001 RAL-321 1212 chr2R 19026029 19026050 chr2R 19026150 19026170 13 121 13.5 1.0 7.2 1.6 141 chr2R 19026029 intron 5-HT1B - chr2R 19026100 intron 5-HT1B - chr2R 19026170 intron 5-HT1B - chr2R_13_19025001 chr2R_19025001 RAL-321 1213 chr2R 19067708 19067750 chr2R 19067804 19067846 17 96 9.5 4.0 6.8 2.2 138 chr2R 19067708 intron 5-HT1A + chr2R 19067777 intron 5-HT1A + chr2R 19067846 intron 5-HT1A + chr2R_17_19065001 chr2R_19065001 RAL-321 1214 chr2R 19363209 19363217 chr2R 19363305 19363313 6 96 0.0 17.5 8.8 0.6 104 chr2R 19363209 intergenic CG10051 + chr2R 19363261 intergenic CG10051 + chr2R 19363313 intergenic CG10051 + chr2R_6_19360001 chr2R_19360001 RAL-321 1215 chr2R 19385260 19385304 chr2R 19385563 19385607 19 303 6.0 4.5 5.2 3.1 347 chr2R 19385260 intergenic CG10073 + chr2R 19385434 intergenic CG10073 +,CG10081 + chr2R 19385607 intergenic CG10081 + chr2R_19_19385001 chr2R_19385001 RAL-321 1216 chr2R 19498452 19498504 chr2R 19498549 19498601 12 96 0.0 8.0 4.0 2.4 149 chr2R 19498452 intron CG15120 + chr2R 19498526 intron CG15120 + chr2R 19498601 intron CG15120 + chr2R_12_19495001 chr2R_19495001 RAL-321 1217 chr2R 19588731 19588780 chr2R 19588829 19588878 21 98 6.5 5.0 5.8 3.1 147 chr2R 19588731 intron sm - chr2R 19588804 intron sm - chr2R 19588878 intron sm - chr2R_21_19585001 chr2R_19585001 RAL-321 1218 chr2R 19637913 19638056 chr2R 19638048 19638157 7 111 4.5 4.5 4.5 1.3 244 chr2R 19637913 3` UTR CG43277 + chr2R 19638035 3` UTR CG43277 + chr2R 19638157 intergenic CG43277 + chr2R_7_19635001 chr2R_19635001 RAL-321 1219 chr2R 19644646 19644680 chr2R 19644752 19644786 16 105 3.0 2.5 2.8 4.2 140 chr2R 19644646 intergenic not near genes chr2R 19644716 intergenic not near genes chr2R 19644786 intergenic not near genes chr2R_16_19640001 chr2R_19640001 RAL-321 1220 chr2R 19715836 19715857 chr2R 19723325 19723346 blood 8 7488 15.5 7.0 11.2 0.7 7510 chr2R 19715836 intergenic not near genes chr2R 19719591 intergenic not near genes chr2R 19723346 intergenic not near genes chr2R_8_19715001 chr2R_19715001 RAL-321 1221 chr2R 19776577 19776622 chr2R 19779920 19779965 jockey 22 3342 7.0 10.5 8.8 2.2 3388 chr2R 19776577 intergenic not near genes chr2R 19778271 intergenic not near genes chr2R 19779965 intergenic not near genes chr2R_22_19775001 chr2R_19775001 RAL-321 1222 chr2R 19914831 19914877 chr2R 19922263 19922309 mdg1 8 7432 9.5 4.5 7.0 1.0 7478 chr2R 19914831 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922309 intergenic not near genes chr2R_8_19915001 chr2R_19915001 RAL-321 1223 chr2R 19957430 19957444 chr2R 19962634 19962666 copia 8 5206 7.5 5.5 6.5 1.1 5236 chr2R 19957430 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962666 intergenic not near genes chr2R_8_19960001 chr2R_19960001 RAL-321 1224 chr2R 19957447 19957456 chr2R 19962631 19962656 copia 7 5208 5.0 5.0 5.0 1.2 5209 chr2R 19957447 intergenic CG44623 + chr2R 19960052 intergenic not near genes chr2R 19962656 intergenic not near genes chr2R_7_19960001 chr2R_19960001 RAL-321 1225 chr2R 20069230 20069249 chr2R 20071890 20071909 opus 10 2660 0.0 8.0 4.0 2.0 2679 chr2R 20069230 intergenic not near genes chr2R 20070570 intergenic not near genes chr2R 20071909 intergenic not near genes chr2R_10_20070001 chr2R_20070001 RAL-321 1226 chr2R 20080600 20080622 chr2R 20080697 20080719 10 97 0.0 13.5 6.8 1.3 119 chr2R 20080600 intergenic not near genes chr2R 20080660 intergenic not near genes chr2R 20080719 intergenic not near genes chr2R_10_20080001 chr2R_20080001 RAL-321 1227 chr2R 20125726 20125748 chr2R 20125822 20125844 11 96 5.0 13.5 9.2 1.1 118 chr2R 20125726 intergenic not near genes chr2R 20125785 intergenic not near genes chr2R 20125844 intergenic not near genes chr2R_11_20125001 chr2R_20125001 RAL-321 1228 chr2R 20186076 20186130 chr2R 20186180 20186234 17 104 3.5 5.0 4.2 3.3 158 chr2R 20186076 intergenic not near genes chr2R 20186155 intergenic not near genes chr2R 20186234 intergenic not near genes chr2R_17_20185001 chr2R_20185001 RAL-321 1229 chr2R 20379138 20379148 chr2R 20379241 20379251 6 103 8.5 0.0 4.2 1.2 113 chr2R 20379138 intergenic not near genes chr2R 20379194 intergenic not near genes chr2R 20379251 intergenic not near genes chr2R_6_20375001 chr2R_20375001 RAL-321 1230 chr2R 20390237 20390281 chr2R 20391394 20391438 13 1153 2.0 7.5 4.8 2.2 1201 chr2R 20390237 intergenic not near genes chr2R 20390838 intergenic not near genes chr2R 20391438 intergenic not near genes chr2R_13_20390001 chr2R_20390001 RAL-321 1231 chr2R 20433622 20433669 chr2R 20434009 20434056 23 387 10.0 7.5 8.8 2.3 434 chr2R 20433622 intron CG12484 + chr2R 20433839 intron CG12484 + chr2R 20434056 intron CG12484 + chr2R_23_20430001 chr2R_20430001 RAL-321 1232 chr2R 20489886 20489918 chr2R 20490003 20490040 10 121 3.0 8.0 5.5 1.5 154 chr2R 20489886 intergenic not near genes chr2R 20489963 intergenic not near genes chr2R 20490040 intergenic not near genes chr2R_10_20485001 chr2R_20485001 RAL-321 1233 chr2R 20518758 20518805 chr2R 20518917 20518964 23 159 3.5 6.5 5.0 3.8 206 chr2R 20518758 intergenic not near genes chr2R 20518861 intergenic not near genes chr2R 20518964 intergenic not near genes chr2R_23_20515001 chr2R_20515001 RAL-321 1234 chr2R 20523018 20523071 chr2R 20523149 20523193 19 122 4.5 5.0 4.8 3.3 175 chr2R 20523018 intergenic not near genes chr2R 20523106 intergenic not near genes chr2R 20523193 intergenic not near genes chr2R_19_20520001 chr2R_20520001 RAL-321 1235 chr2R 20555313 20555336 chr2R 20555417 20555440 5 104 7.5 7.5 7.5 0.6 127 chr2R 20555313 intergenic not near genes chr2R 20555376 intergenic not near genes chr2R 20555440 intergenic not near genes chr2R_5_20555001 chr2R_20555001 RAL-321 1236 chr2R 20577075 20577120 chr2R 20577178 20577231 13 103 0.5 1.5 1.0 6.5 156 chr2R 20577075 intron qsm - chr2R 20577153 intron qsm - chr2R 20577231 intron qsm - chr2R_13_20575001 chr2R_20575001 RAL-321 1237 chr2R 20590653 20590669 chr2R 20590752 20590768 4 99 5.0 5.5 5.2 0.6 115 chr2R 20590653 intron bl + chr2R 20590710 intron bl + chr2R 20590768 intron bl + chr2R_4_20590001 chr2R_20590001 RAL-321 1238 chr2R 20691132 20691181 chr2R 20691565 20691614 11 433 4.5 0.0 2.2 3.4 482 chr2R 20691132 intergenic not near genes chr2R 20691373 intergenic not near genes chr2R 20691614 intergenic CR44659 + chr2R_11_20690001 chr2R_20690001 RAL-321 1239 chr2R 20739442 20739476 chr2R 20744210 20744264 F-element 15 4785 7.0 4.5 5.8 2.2 4822 chr2R 20739442 intron dpr + chr2R 20741853 intron dpr + chr2R 20744264 intron dpr + chr2R_15_20740001 chr2R_20740001 RAL-321 1240 chr2R 20759797 20759814 chr2R 20759892 20759900 9 94 0.0 12.0 6.0 1.3 103 chr2R 20759797 intergenic not near genes chr2R 20759848 intergenic not near genes chr2R 20759900 intergenic not near genes chr2R_9_20755001 chr2R_20755001 RAL-321 1241 chr2R 20783291 20783328 chr2R 20788083 20788120 F-element 21 4792 7.0 8.5 7.8 2.4 4829 chr2R 20783291 intergenic not near genes chr2R 20785706 intergenic not near genes chr2R 20788120 intergenic CG43666 - chr2R_21_20785001 chr2R_20785001 RAL-321 1242 chr2R 20962885 20962938 chr2R 20963003 20963056 25 118 4.0 4.5 4.2 4.8 171 chr2R 20962885 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963056 intergenic not near genes chr2R_25_20960001 chr2R_20960001 RAL-321 1243 chr2R 20967005 20967054 chr2R 20967102 20967151 25 97 7.5 0.5 4.0 5.0 146 chr2R 20967005 intergenic not near genes chr2R 20967078 intergenic not near genes chr2R 20967151 intergenic not near genes chr2R_25_20965001 chr2R_20965001 RAL-321 1244 chr2R 21007189 21007239 chr2R 21007332 21007382 26 141 4.5 7.5 6.0 3.7 193 chr2R 21007189 3` UTR CG10543 + chr2R 21007286 3` UTR CG10543 + chr2R 21007382 3` UTR CG10543 + chr2R_26_21005001 chr2R_21005001 RAL-321 1245 chr2R 21151130 21151146 chr2R 21153767 21153799 opus 6 2650 0.0 9.5 4.8 1.0 2669 chr2R 21151130 intron CG30389 - chr2R 21152464 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_6_21150001 chr2R_21150001 RAL-321 1246 chr2R 21188203 21188250 chr2R 21188303 21188351 19 100 7.0 6.0 6.5 2.5 148 chr2R 21188203 exon tud + chr2R 21188277 intron tud + chr2R 21188351 intron tud + chr2R_19_21185001 chr2R_21185001 RAL-321 1247 chr2R 21208813 21208828 chr2R 21209085 21209101 6 272 9.0 6.0 7.5 0.7 288 chr2R 21208813 intron,intron CG44245 +,Glycogenin + chr2R 21208957 intron,intron CG44245 +,Glycogenin + chr2R 21209101 intron,intron CG44245 +,Glycogenin + chr2R_6_21205001 chr2R_21205001 RAL-321 1248 chr2R 21221017 21221028 chr2R 21221103 21221140 4 106 3.0 4.5 3.8 0.8 123 chr2R 21221017 exon ASPP - chr2R 21221078 exon ASPP - chr2R 21221140 exon ASPP - chr2R_4_21220001 chr2R_21220001 RAL-321 1249 chr2R 21258454 21258499 chr2R 21258552 21258597 8 94 0.0 6.5 3.2 1.9 143 chr2R 21258454 intron Rgk3 + chr2R 21258526 intron Rgk3 + chr2R 21258597 intron Rgk3 + chr2R_8_21255001 chr2R_21255001 RAL-321 1250 chr2R 21285420 21285436 chr2R 21285517 21285528 7 96 10.0 10.0 10.0 0.6 108 chr2R 21285420 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285528 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_7_21285001 chr2R_21285001 RAL-321 1251 chr2R 21322926 21322966 chr2R 21323030 21323070 13 99 6.5 7.5 7.0 1.6 144 chr2R 21322926 5` UTR CG30394 - chr2R 21322998 5` UTR CG30394 - chr2R 21323070 intron CG30394 - chr2R_13_21320001 chr2R_21320001 RAL-321 1252 chr2R 21363116 21363184 chr2R 21363234 21363288 16 115 0.0 0.0 0.0 16.0 172 chr2R 21363116 intron cv-2 - chr2R 21363202 intron cv-2 - chr2R 21363288 intron cv-2 - chr2R_16_21360001 chr2R_21360001 RAL-321 1253 chr2R 21429921 21429972 chr2R 21430019 21430070 21 98 5.0 6.0 5.5 3.2 149 chr2R 21429921 intron Sdc - chr2R 21429996 intron Sdc - chr2R 21430070 intron Sdc - chr2R_21_21425001 chr2R_21425001 RAL-321 1254 chr2R 21442670 21442714 chr2R 21442764 21442818 14 103 4.5 4.0 4.2 2.7 148 chr2R 21442670 intron Sdc - chr2R 21442744 intron Sdc - chr2R 21442818 intron Sdc - chr2R_14_21440001 chr2R_21440001 RAL-321 1255 chr2R 21505745 21505795 chr2R 21505846 21505896 27 101 8.0 7.5 7.8 3.1 151 chr2R 21505745 intron MESK2 + chr2R 21505820 intron MESK2 + chr2R 21505896 intron MESK2 + chr2R_27_21505001 chr2R_21505001 RAL-321 1256 chr2R 21525668 21525702 chr2R 21525885 21525919 11 215 5.0 3.5 4.2 2.1 251 chr2R 21525668 intron Egfr + chr2R 21525794 intron Egfr + chr2R 21525919 intron Egfr + chr2R_11_21525001 chr2R_21525001 RAL-321 1257 chr2R 21546766 21546821 chr2R 21546867 21546907 12 82 4.5 4.5 4.5 2.2 141 chr2R 21546766 intron Egfr + chr2R 21546836 intron Egfr + chr2R 21546907 intron Egfr + chr2R_12_21545001 chr2R_21545001 RAL-321 1258 chr2R 21598948 21599000 chr2R 21599128 21599160 21 178 5.5 5.0 5.2 3.4 212 chr2R 21598948 intergenic not near genes chr2R 21599054 intergenic not near genes chr2R 21599160 intergenic not near genes chr2R_21_21595001 chr2R_21595001 RAL-321 1259 chr2R 21605899 21605940 chr2R 21606003 21606013 15 100 7.0 5.5 6.2 2.1 114 chr2R 21605899 3` UTR CG10433 - chr2R 21605956 3` UTR CG10433 - chr2R 21606013 3` UTR CG10433 - chr2R_15_21605001 chr2R_21605001 RAL-321 1260 chr2R 21619288 21619333 chr2R 21619400 21619445 20 112 9.0 10.0 9.5 1.9 157 chr2R 21619288 intergenic PTP-ER -,clt - chr2R 21619366 3` UTR PTP-ER - chr2R 21619445 3` UTR PTP-ER - chr2R_20_21615001 chr2R_21615001 RAL-321 1261 chr2R 21700142 21700185 chr2R 21700241 21700279 19 102 3.5 6.5 5.0 3.2 137 chr2R 21700142 intron HmgZ - chr2R 21700210 intron HmgZ - chr2R 21700279 intron HmgZ - chr2R_19_21700001 chr2R_21700001 RAL-321 1262 chr2R 21721562 21721609 chr2R 21721670 21721716 10 102 4.5 6.0 5.2 1.6 154 chr2R 21721562 intron LBR + chr2R 21721639 intron LBR + chr2R 21721716 intron LBR + chr2R_10_21720001 chr2R_21720001 RAL-321 1263 chr2R 21738289 21738308 chr2R 21747436 21747468 roo 10 9162 6.0 5.5 5.8 1.5 9179 chr2R 21738289 intergenic not near genes chr2R 21742878 intergenic not near genes chr2R 21747468 intergenic not near genes chr2R_10_21740001 chr2R_21740001 RAL-321 1264 chr2R 21753064 21753116 chr2R 21753568 21753621 roo 25 504 6.0 8.0 7.0 3.1 557 chr2R 21753064 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753621 intergenic not near genes chr2R_25_21750001 chr2R_21750001 RAL-321 1265 chr2R 21759539 21759592 chr2R 21759646 21759699 25 106 4.5 3.0 3.8 5.2 160 chr2R 21759539 intergenic not near genes chr2R 21759619 intergenic not near genes chr2R 21759699 intergenic not near genes chr2R_25_21755001 chr2R_21755001 RAL-321 1266 chr2R 21809508 21809528 chr2R 21817768 21817778 roo 14 8258 15.0 8.5 11.8 1.1 8270 chr2R 21809508 intergenic not near genes chr2R 21813643 intergenic not near genes chr2R 21817778 intergenic not near genes chr2R_14_21810001 chr2R_21810001 RAL-321 1267 chr2R 21809529 21809558 chr2R 21817763 21817813 roo 15 8255 6.0 7.0 6.5 2.0 8284 chr2R 21809529 intergenic not near genes chr2R 21813671 intergenic not near genes chr2R 21817813 intergenic not near genes chr2R_15_21810001 chr2R_21810001 RAL-321 1268 chr2R 21870935 21870966 chr2R 21871034 21871065 14 98 3.5 4.5 4.0 2.8 130 chr2R 21870935 intergenic not near genes chr2R 21871000 intergenic not near genes chr2R 21871065 intergenic not near genes chr2R_14_21870001 chr2R_21870001 RAL-321 1269 chr2R 21888296 21888320 chr2R 21888407 21888431 9 110 5.0 8.0 6.5 1.2 135 chr2R 21888296 intron Fili + chr2R 21888364 intron Fili + chr2R 21888431 intron Fili + chr2R_9_21885001 chr2R_21885001 RAL-321 1270 chr2R 21889579 21889592 chr2R 21889677 21889705 4 108 3.5 0.0 1.8 1.4 126 chr2R 21889579 intron Fili + chr2R 21889642 intron Fili + chr2R 21889705 intron Fili + chr2R_4_21885001 chr2R_21885001 RAL-321 1271 chr2R 21906249 21906303 chr2R 21906371 21906424 13 122 5.5 4.5 5.0 2.2 175 chr2R 21906249 intron Fili + chr2R 21906336 intron Fili + chr2R 21906424 intron Fili + chr2R_13_21905001 chr2R_21905001 RAL-321 1272 chr2R 21919851 21919904 chr2R 21919959 21919991 20 100 6.5 5.0 5.8 2.9 140 chr2R 21919851 intron Fili + chr2R 21919921 intron Fili + chr2R 21919991 intron Fili + chr2R_20_21915001 chr2R_21915001 RAL-321 1273 chr2R 21932242 21932281 chr2R 21932325 21932370 26 92 4.0 5.0 4.5 4.7 128 chr2R 21932242 intron Fili + chr2R 21932306 intron Fili + chr2R 21932370 intron Fili + chr2R_26_21930001 chr2R_21930001 RAL-321 1274 chr2R 21936442 21936486 chr2R 21936889 21936933 17 446 4.5 7.0 5.8 2.5 491 chr2R 21936442 intron,exon Fili +,CG43742 - chr2R 21936688 intron,exon Fili +,CG43742 - chr2R 21936933 intron Fili + chr2R_17_21935001 chr2R_21935001 RAL-321 1275 chr2R 21992397 21992428 chr2R 21992494 21992525 12 97 0.0 6.0 3.0 3.0 128 chr2R 21992397 intron CG34370 - chr2R 21992461 intron CG34370 - chr2R 21992525 intron CG34370 - chr2R_12_21990001 chr2R_21990001 RAL-321 1276 chr2R 21993352 21993403 chr2R 21993463 21993515 23 111 6.5 0.5 3.5 5.1 163 chr2R 21993352 intron CG34370 - chr2R 21993434 intron CG34370 - chr2R 21993515 intron CG34370 - chr2R_23_21990001 chr2R_21990001 RAL-321 1277 chr2R 22004279 22004319 chr2R 22004393 22004430 18 114 6.0 0.0 3.0 4.5 151 chr2R 22004279 intron CG34370 - chr2R 22004354 intron CG34370 - chr2R 22004430 intron CG34370 - chr2R_18_22000001 chr2R_22000001 RAL-321 1278 chr2R 22014207 22014232 chr2R 22014293 22014317 8 91 4.0 10.0 7.0 1.0 110 chr2R 22014207 intron CG34370 - chr2R 22014262 intron CG34370 - chr2R 22014317 intron CG34370 - chr2R_8_22010001 chr2R_22010001 RAL-321 1279 chr2R 22072681 22072714 chr2R 22072786 22072802 10 103 5.0 7.5 6.2 1.4 121 chr2R 22072681 intron CG11474 - chr2R 22072742 intron CG11474 - chr2R 22072802 exon CG11474 - chr2R_10_22070001 chr2R_22070001 RAL-321 1280 chr2R 22090030 22090085 chr2R 22090132 22090187 13 102 4.0 2.5 3.2 3.1 157 chr2R 22090030 3` UTR CG43393 - chr2R 22090108 3` UTR CG43393 - chr2R 22090187 exon CG43393 - chr2R_13_22090001 chr2R_22090001 RAL-321 1281 chr2R 22099860 22099882 chr2R 22099961 22099983 14 100 8.5 8.5 8.5 1.5 123 chr2R 22099860 intergenic CG11073 - chr2R 22099922 intergenic CG11073 - chr2R 22099983 intergenic CG11073 - chr2R_14_22095001 chr2R_22095001 RAL-321 1282 chr2R 22132272 22132286 chr2R 22132372 22132386 5 100 6.5 6.5 6.5 0.7 114 chr2R 22132272 intergenic not near genes chr2R 22132329 intergenic not near genes chr2R 22132386 intergenic not near genes chr2R_5_22130001 chr2R_22130001 RAL-321 1283 chr2R 22153744 22153752 chr2R 22153841 22153849 4 97 15.5 0.0 7.8 0.5 105 chr2R 22153744 intron a + chr2R 22153796 intron a + chr2R 22153849 intron a + chr2R_4_22150001 chr2R_22150001 RAL-321 1284 chr2R 22182895 22182937 chr2R 22182999 22183041 37 104 6.0 11.0 8.5 3.9 146 chr2R 22182895 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22182968 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183041 intergenic MED16 +,CG11170 -,CG11275 + chr2R_37_22180001 chr2R_22180001 RAL-321 1285 chr2R 22181758 22181773 chr2R 22183387 22183396 5 1625 34.0 34.0 34.0 0.1 1638 chr2R 22181758 intron,exon CG11170 -,CG11275 + chr2R 22182577 intron,3` UTR CG11170 -,CG11275 + chr2R 22183396 exon MED16 + chr2R_5_22180001 chr2R_22180001 RAL-321 1286 chr2R 22181755 22181796 chr2R 22183397 22183419 18 1630 46.5 34.0 40.2 0.4 1664 chr2R 22181755 intron,exon CG11170 -,CG11275 + chr2R 22182587 intron,3` UTR CG11170 -,CG11275 + chr2R 22183419 exon MED16 + chr2R_18_22180001 chr2R_22180001 RAL-321 1287 chr2R 22205847 22205881 chr2R 22205959 22205993 14 111 5.0 4.5 4.8 2.4 146 chr2R 22205847 intergenic CG3290 -,CG3292 - chr2R 22205920 intergenic CG3290 -,CG3292 - chr2R 22205993 intergenic CG3290 -,CG3292 - chr2R_14_22205001 chr2R_22205001 RAL-321 1288 chr2R 22243046 22243080 chr2R 22243151 22243169 4 96 6.0 7.0 6.5 0.5 123 chr2R 22243046 intergenic not near genes chr2R 22243108 intergenic not near genes chr2R 22243169 intergenic not near genes chr2R_4_22240001 chr2R_22240001 RAL-321 1289 chr2R 22243082 22243088 chr2R 22243146 22243185 8 79 5.0 6.0 5.5 1.2 103 chr2R 22243082 intergenic not near genes chr2R 22243134 intergenic not near genes chr2R 22243185 intergenic not near genes chr2R_8_22240001 chr2R_22240001 RAL-321 1290 chr2R 22290065 22290086 chr2R 22290164 22290181 14 103 12.0 3.5 7.8 1.6 116 chr2R 22290065 intergenic not near genes chr2R 22290123 intergenic not near genes chr2R 22290181 intergenic not near genes chr2R_14_22290001 chr2R_22290001 RAL-321 1291 chr2R 22349674 22349722 chr2R 22351478 22351516 jockey 15 1802 5.5 9.0 7.2 1.8 1842 chr2R 22349674 intron Liprin-gamma - chr2R 22350595 intron Liprin-gamma - chr2R 22351516 intron Liprin-gamma - chr2R_15_22350001 chr2R_22350001 RAL-321 1292 chr2R 22360369 22360375 chr2R 22360822 22360828 jockey 5 453 17.5 4.0 10.8 0.4 459 chr2R 22360369 intron Liprin-gamma - chr2R 22360598 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-321 1293 chr2R 22377784 22377839 chr2R 22377890 22377943 18 104 3.5 3.0 3.2 4.3 159 chr2R 22377784 3` UTR Rtf1 + chr2R 22377864 3` UTR Rtf1 + chr2R 22377943 3` UTR Rtf1 + chr2R_18_22375001 chr2R_22375001 RAL-321 1294 chr2R 22411473 22411526 chr2R 22411570 22411624 14 98 4.0 4.5 4.2 2.7 151 chr2R 22411473 5` UTR qkr58E-3 - chr2R 22411548 intergenic qkr58E-3 -,Mes4 + chr2R 22411624 intergenic qkr58E-3 -,Mes4 + chr2R_14_22410001 chr2R_22410001 RAL-321 1295 chr2R 22420498 22420507 chr2R 22420596 22420605 9 98 5.5 0.0 2.8 2.4 107 chr2R 22420498 intergenic mRpS29 - chr2R 22420552 intergenic mRpS29 -,rad50 + chr2R 22420605 intergenic mRpS29 -,rad50 + chr2R_9_22420001 chr2R_22420001 RAL-321 1296 chr2R 22525734 22525744 chr2R 22529309 22529318 jockey 4 3573 18.5 7.5 13.0 0.3 3584 chr2R 22525734 intron px - chr2R 22527526 intron px - chr2R 22529318 intron px - chr2R_4_22525001 chr2R_22525001 RAL-321 1297 chr2R 22525746 22525786 chr2R 22529304 22529311 jockey 8 3554 6.5 6.5 6.5 1.1 3565 chr2R 22525746 intron px - chr2R 22527528 intron px - chr2R 22529311 intron px - chr2R_8_22525001 chr2R_22525001 RAL-321 1298 chr2R 22534148 22534196 chr2R 22534245 22534298 16 97 8.0 0.0 4.0 3.2 150 chr2R 22534148 intron px - chr2R 22534223 intron px - chr2R 22534298 intron px - chr2R_16_22530001 chr2R_22530001 RAL-321 1299 chr2R 22577076 22577120 chr2R 22577170 22577220 16 91 1.5 0.0 0.8 8.9 144 chr2R 22577076 intron dnr1 - chr2R 22577148 intron dnr1 - chr2R 22577220 intron dnr1 - chr2R_16_22575001 chr2R_22575001 RAL-321 1300 chr2R 22591375 22591400 chr2R 22591487 22591527 13 120 9.0 6.5 7.8 1.5 152 chr2R 22591375 intron dnr1 - chr2R 22591451 intron dnr1 - chr2R 22591527 intron dnr1 - chr2R_13_22590001 chr2R_22590001 RAL-321 1301 chr2R 22591402 22591412 chr2R 22591486 22591539 10 115 6.0 6.5 6.2 1.4 137 chr2R 22591402 intron dnr1 - chr2R 22591470 intron dnr1 - chr2R 22591539 intron dnr1 - chr2R_10_22590001 chr2R_22590001 RAL-321 1302 chr2R 22623439 22623461 chr2R 22623599 22623621 9 159 8.0 8.0 8.0 1.0 182 chr2R 22623439 intron CG33143 + chr2R 22623530 intron CG33143 + chr2R 22623621 intron CG33143 + chr2R_9_22620001 chr2R_22620001 RAL-321 1303 chr2R 22623468 22623478 chr2R 22623592 22623638 9 154 8.0 4.5 6.2 1.2 170 chr2R 22623468 intron CG33143 + chr2R 22623553 intron CG33143 + chr2R 22623638 intron CG33143 + chr2R_9_22620001 chr2R_22620001 RAL-321 1304 chr2R 22654349 22654398 chr2R 22654447 22654499 18 99 5.5 6.0 5.8 2.6 150 chr2R 22654349 exon Cyp6d2 - chr2R 22654424 5` UTR Cyp6d2 - chr2R 22654499 5` UTR Cyp6d2 - chr2R_18_22650001 chr2R_22650001 RAL-321 1305 chr2R 22723212 22723266 chr2R 22723308 22723362 19 95 7.0 4.0 5.5 2.9 150 chr2R 22723212 intron jbug - chr2R 22723287 intron jbug - chr2R 22723362 intron jbug - chr2R_19_22720001 chr2R_22720001 RAL-321 1306 chr2R 22754055 22754079 chr2R 22754160 22754175 5 100 6.5 6.5 6.5 0.7 120 chr2R 22754055 intron CG42260 - chr2R 22754115 intron CG42260 - chr2R 22754175 intron CG42260 - chr2R_5_22750001 chr2R_22750001 RAL-321 1307 chr2R 22774949 22774996 chr2R 22775387 22775435 jockey 23 437 6.5 8.5 7.5 2.7 486 chr2R 22774949 intron CG42260 - chr2R 22775192 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_23_22775001 chr2R_22775001 RAL-321 1308 chr2R 22777939 22777991 chr2R 22778082 22778123 6 136 8.0 0.0 4.0 1.2 184 chr2R 22777939 intron CG42260 - chr2R 22778031 intron CG42260 - chr2R 22778123 intron CG42260 - chr2R_6_22775001 chr2R_22775001 RAL-321 1309 chr2R 22787585 22787593 chr2R 22787738 22787746 7 153 3.5 12.0 7.8 0.8 161 chr2R 22787585 intron CG42260 - chr2R 22787666 intron CG42260 - chr2R 22787746 intron CG42260 - chr2R_7_22785001 chr2R_22785001 RAL-321 1310 chr2R 22908457 22908470 chr2R 22908553 22908566 5 96 4.0 1.0 2.5 1.4 109 chr2R 22908457 intron nahoda + chr2R 22908512 intron nahoda + chr2R 22908566 intron nahoda + chr2R_5_22905001 chr2R_22905001 RAL-321 1311 chr2R 22953370 22953374 chr2R 22953484 22953488 4 114 5.0 0.0 2.5 1.1 118 chr2R 22953370 intron CR32835 - chr2R 22953429 3` UTR CR32835 - chr2R 22953488 3` UTR CR32835 - chr2R_4_22950001 chr2R_22950001 RAL-321 1312 chr2R 22957033 22957061 chr2R 22957132 22957160 11 99 5.0 13.0 9.0 1.1 127 chr2R 22957033 intergenic CR44780 - chr2R 22957096 intergenic CR44780 - chr2R 22957160 intergenic CR44780 - chr2R_11_22955001 chr2R_22955001 RAL-321 1313 chr2R 22971489 22971532 chr2R 22971577 22971631 19 97 3.5 3.0 3.2 4.5 142 chr2R 22971489 intergenic not near genes chr2R 22971560 intergenic not near genes chr2R 22971631 intergenic not near genes chr2R_19_22970001 chr2R_22970001 RAL-321 1314 chr2R 22978267 22978309 chr2R 22978365 22978408 12 98 3.5 5.0 4.2 2.3 141 chr2R 22978267 intergenic not near genes chr2R 22978338 intergenic not near genes chr2R 22978408 intergenic not near genes chr2R_12_22975001 chr2R_22975001 RAL-321 1315 chr2R 23029609 23029622 chr2R 23029697 23029709 5 93 10.0 8.5 9.2 0.5 100 chr2R 23029609 intron,intron twi +,CG42741 - chr2R 23029659 intron,intron twi +,CG42741 - chr2R 23029709 intron,intron twi +,CG42741 - chr2R_5_23025001 chr2R_23025001 RAL-321 1316 chr2R 23061752 23061777 chr2R 23061866 23061891 11 112 6.0 8.5 7.2 1.3 139 chr2R 23061752 3` UTR l(2)06496 - chr2R 23061822 3` UTR l(2)06496 - chr2R 23061891 3` UTR l(2)06496 - chr2R_11_23060001 chr2R_23060001 RAL-321 1317 chr2R 23134827 23134835 chr2R 23134923 23134938 8 100 10.0 12.0 11.0 0.7 111 chr2R 23134827 intergenic not near genes chr2R 23134882 intergenic not near genes chr2R 23134938 intergenic not near genes chr2R_8_23130001 chr2R_23130001 RAL-321 1318 chr2R 23134841 23134850 chr2R 23134922 23134923 4 88 6.5 11.5 9.0 0.4 82 chr2R 23134841 intergenic not near genes chr2R 23134882 intergenic not near genes chr2R 23134923 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RAL-321 1319 chr2R 23158326 23158355 chr2R 23158423 23158447 8 93 8.5 8.0 8.2 0.9 121 chr2R 23158326 intron CG9899 + chr2R 23158386 intron CG9899 + chr2R 23158447 intron CG9899 + chr2R_8_23155001 chr2R_23155001 RAL-321 1320 chr2R 23190006 23190015 chr2R 23190106 23190115 4 100 15.0 0.0 7.5 0.5 109 chr2R 23190006 intron CG34371 - chr2R 23190060 intron CG34371 - chr2R 23190115 intron CG34371 - chr2R_4_23190001 chr2R_23190001 RAL-321 1321 chr2R 23194188 23194207 chr2R 23194290 23194309 9 102 2.5 7.5 5.0 1.5 121 chr2R 23194188 intron CG34371 - chr2R 23194248 intron CG34371 - chr2R 23194309 intron CG34371 - chr2R_9_23190001 chr2R_23190001 RAL-321 1322 chr2R 23228277 23228324 chr2R 23228401 23228448 21 122 4.5 7.5 6.0 3.0 171 chr2R 23228277 intergenic not near genes chr2R 23228362 intergenic not near genes chr2R 23228448 intergenic not near genes chr2R_21_23225001 chr2R_23225001 RAL-321 1323 chr2R 23231941 23231998 chr2R 23232082 23232135 15 136 0.5 9.5 5.0 2.5 194 chr2R 23231941 intergenic not near genes chr2R 23232038 intergenic not near genes chr2R 23232135 intergenic CG3092 + chr2R_15_23230001 chr2R_23230001 RAL-321 1324 chr2R 23236797 23236852 chr2R 23236915 23236966 6 115 0.0 0.0 0.0 6.0 169 chr2R 23236797 intergenic not near genes chr2R 23236882 intergenic not near genes chr2R 23236966 intergenic not near genes chr2R_6_23235001 chr2R_23235001 RAL-321 1325 chr2R 23241363 23241408 chr2R 23241461 23241498 25 93 3.5 4.5 4.0 5.0 135 chr2R 23241363 intergenic not near genes chr2R 23241430 intergenic not near genes chr2R 23241498 intergenic not near genes chr2R_25_23240001 chr2R_23240001 RAL-321 1326 chr2R 23291309 23291341 chr2R 23291407 23291439 13 98 3.0 0.0 1.5 5.2 130 chr2R 23291309 3` UTR CR44783 - chr2R 23291374 3` UTR CR44783 - chr2R 23291439 intergenic CR44783 - chr2R_13_23290001 chr2R_23290001 RAL-321 1327 chr2R 23402590 23402642 chr2R 23407686 23407738 flea 26 5096 4.0 8.5 6.2 3.6 5148 chr2R 23402590 intergenic CG3520 - chr2R 23405164 intergenic not near genes chr2R 23407738 intergenic not near genes chr2R_26_23405001 chr2R_23405001 RAL-321 1328 chr2R 23422637 23422677 chr2R 23422727 23422776 17 98 5.5 6.0 5.8 2.5 139 chr2R 23422637 intron CG9815 - chr2R 23422706 intron CG9815 - chr2R 23422776 intron CG9815 - chr2R_17_23420001 chr2R_23420001 RAL-321 1329 chr2R 23437217 23437236 chr2R 23437314 23437325 7 94 5.5 9.5 7.5 0.8 108 chr2R 23437217 intergenic not near genes chr2R 23437271 intergenic not near genes chr2R 23437325 intergenic not near genes chr2R_7_23435001 chr2R_23435001 RAL-321 1330 chr2R 23487427 23487473 chr2R 23487529 23487575 27 98 7.0 2.5 4.8 4.7 148 chr2R 23487427 intron CG43795 + chr2R 23487501 intron CG43795 + chr2R 23487575 intron CG43795 + chr2R_27_23485001 chr2R_23485001 RAL-321 1331 chr2R 23508898 23508943 chr2R 23509035 23509080 17 137 6.0 4.0 5.0 2.8 182 chr2R 23508898 intergenic not near genes chr2R 23508989 intergenic not near genes chr2R 23509080 intergenic not near genes chr2R_17_23505001 chr2R_23505001 RAL-321 1332 chr2R 23529585 23529606 chr2R 23537156 23537156 412 6 7570 5.5 4.0 4.8 1.0 7571 chr2R 23529585 intron bw - chr2R 23533370 intron bw - chr2R 23537156 exon bw - chr2R_6_23530001 chr2R_23530001 RAL-321 1333 chr2R 23563882 23563917 chr2R 23563971 23564017 13 96 3.5 8.5 6.0 1.9 135 chr2R 23563882 3` UTR Pi3K59F + chr2R 23563950 3` UTR Pi3K59F + chr2R 23564017 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_13_23560001 chr2R_23560001 RAL-321 1334 chr2R 23680228 23680254 chr2R 23680327 23680353 15 97 3.0 6.0 4.5 2.7 125 chr2R 23680228 3` UTR Pde8 + chr2R 23680290 3` UTR Pde8 + chr2R 23680353 3` UTR Pde8 + chr2R_15_23680001 chr2R_23680001 RAL-321 1335 chr2R 23711140 23711144 chr2R 23711245 23711255 4 108 8.5 2.5 5.5 0.6 115 chr2R 23711140 intergenic not near genes chr2R 23711198 intergenic not near genes chr2R 23711255 intergenic not near genes chr2R_4_23710001 chr2R_23710001 RAL-321 1336 chr2R 23711151 23711164 chr2R 23711242 23711275 4 106 5.0 2.5 3.8 0.8 124 chr2R 23711151 intergenic not near genes chr2R 23711213 intergenic not near genes chr2R 23711275 intergenic not near genes chr2R_4_23710001 chr2R_23710001 RAL-321 1337 chr2R 23711165 23711183 chr2R 23711241 23711281 9 105 4.0 2.5 3.2 2.1 116 chr2R 23711165 intergenic not near genes chr2R 23711223 intergenic not near genes chr2R 23711281 intergenic not near genes chr2R_9_23710001 chr2R_23710001 RAL-321 1338 chr2R 23726208 23726254 chr2R 23726312 23726364 25 108 10.0 6.0 8.0 2.8 156 chr2R 23726208 intron Sesn + chr2R 23726286 intron Sesn + chr2R 23726364 intron Sesn + chr2R_25_23725001 chr2R_23725001 RAL-321 1339 chr2R 23771257 23771307 chr2R 23771357 23771405 8 98 3.0 0.5 1.8 2.9 148 chr2R 23771257 intron CG9850 - chr2R 23771331 intron CG9850 - chr2R 23771405 intron CG9850 - chr2R_8_23770001 chr2R_23770001 RAL-321 1340 chr2R 23784450 23784505 chr2R 23784548 23784603 22 97 2.5 5.5 4.0 4.4 153 chr2R 23784450 intron CG9850 - chr2R 23784526 intron CG9850 - chr2R 23784603 intron CG9850 - chr2R_22_23780001 chr2R_23780001 RAL-321 1341 chr2R 23802290 23802306 chr2R 23802400 23802410 8 117 8.5 12.0 10.2 0.7 120 chr2R 23802290 3` UTR CG30177 + chr2R 23802350 3` UTR CG30177 + chr2R 23802410 3` UTR CG30177 + chr2R_8_23800001 chr2R_23800001 RAL-321 1342 chr2R 23840720 23840728 chr2R 23840822 23840830 5 102 9.0 0.0 4.5 0.9 110 chr2R 23840720 5` UTR CR44805 + chr2R 23840775 5` UTR CR44805 + chr2R 23840830 intergenic CR44805 + chr2R_5_23840001 chr2R_23840001 RAL-321 1343 chr2R 23885983 23886036 chr2R 23889040 23889093 23 3059 47.5 44.0 45.8 0.5 3110 chr2R 23885983 intergenic not near genes chr2R 23887538 intron CG5597 + chr2R 23889093 exon Dcp1 - chr2R_23_23885001 chr2R_23885001 RAL-321 1344 chr2R 23914279 23914328 chr2R 23921923 23921972 412 20 7639 6.5 6.5 6.5 2.7 7693 chr2R 23914279 exon kcc + chr2R 23918126 intron kcc + chr2R 23921972 exon kcc + chr2R_20_23915001 chr2R_23915001 RAL-321 1345 chr2R 24147047 24147088 chr2R 24154645 24154650 412 12 7586 6.5 9.0 7.8 1.4 7603 chr2R 24147047 intron Dat + chr2R 24150848 intron Dat + chr2R 24154650 intron Dat + chr2R_12_24150001 chr2R_24150001 RAL-321 1346 chr2R 24177214 24177266 chr2R 24184719 24184771 412 23 7505 9.0 7.5 8.2 2.5 7557 chr2R 24177214 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184771 3` UTR Nop60B + chr2R_23_24180001 chr2R_24180001 RAL-321 1347 chr2R 24204538 24204593 chr2R 24204640 24204695 27 102 4.5 5.5 5.0 4.5 157 chr2R 24204538 intron CG11406 - chr2R 24204616 intron CG11406 - chr2R 24204695 intron CG11406 - chr2R_27_24200001 chr2R_24200001 RAL-321 1348 chr2R 24218571 24218590 chr2R 24218643 24218675 6 82 2.5 6.5 4.5 1.1 104 chr2R 24218571 intron CG30419 - chr2R 24218623 intron CG30419 - chr2R 24218675 intron CG30419 - chr2R_6_24215001 chr2R_24215001 RAL-321 1349 chr2R 24278302 24278353 chr2R 24278406 24278451 13 102 2.0 9.5 5.8 1.9 149 chr2R 24278302 intron nvy + chr2R 24278376 intron nvy + chr2R 24278451 intron nvy + chr2R_13_24275001 chr2R_24275001 RAL-321 1350 chr2R 24303524 24303536 chr2R 24303603 24303625 7 87 9.5 8.5 9.0 0.7 101 chr2R 24303524 intergenic not near genes chr2R 24303574 intergenic not near genes chr2R 24303625 intergenic not near genes chr2R_7_24300001 chr2R_24300001 RAL-321 1351 chr2R 24320157 24320203 chr2R 24320281 24320327 11 122 6.5 6.5 6.5 1.5 170 chr2R 24320157 intergenic not near genes chr2R 24320242 intergenic not near genes chr2R 24320327 intergenic not near genes chr2R_11_24320001 chr2R_24320001 RAL-321 1352 chr2R 24352576 24352601 chr2R 24352669 24352699 11 96 2.5 5.5 4.0 2.2 123 chr2R 24352576 intron,intron bs +,CR44811 - chr2R 24352638 intron,intron bs +,CR44811 - chr2R 24352699 intron,intron bs +,CR44811 - chr2R_11_24350001 chr2R_24350001 RAL-321 1353 chr2R 24353407 24353445 chr2R 24361789 24361827 roo 20 8380 9.5 6.5 8.0 2.2 8420 chr2R 24353407 intron,intron bs +,CR44811 - chr2R 24357617 intron,intron bs +,CR44811 - chr2R 24361827 intron,intron bs +,CR44811 - chr2R_20_24355001 chr2R_24355001 RAL-321 1354 chr2R 24481456 24481484 chr2R 24481544 24481585 6 90 7.5 10.0 8.8 0.6 129 chr2R 24481456 intron CG13579 + chr2R 24481520 intron CG13579 + chr2R 24481585 intron CG13579 + chr2R_6_24480001 chr2R_24480001 RAL-321 1355 chr2R 24493066 24493089 chr2R 24493175 24493198 15 109 4.5 7.0 5.8 2.2 132 chr2R 24493066 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493198 intergenic CG13590 -,CG13589 - chr2R_15_24490001 chr2R_24490001 RAL-321 1356 chr2R 24590076 24590144 chr2R 24590204 24590223 11 119 0.0 4.0 2.0 3.7 147 chr2R 24590076 intron pio + chr2R 24590150 intron pio + chr2R 24590223 intron pio + chr2R_11_24590001 chr2R_24590001 RAL-321 1357 chr2R 24636883 24636912 chr2R 24636989 24637018 19 106 13.5 0.0 6.8 2.4 135 chr2R 24636883 intron CG13594 - chr2R 24636950 intron CG13594 - chr2R 24637018 intron CG13594 - chr2R_19_24635001 chr2R_24635001 RAL-321 1358 chr2R 24647576 24647617 chr2R 24655147 24655194 412 15 7574 7.5 8.5 8.0 1.7 7618 chr2R 24647576 intergenic not near genes chr2R 24651385 intergenic not near genes chr2R 24655194 intergenic not near genes chr2R_15_24650001 chr2R_24650001 RAL-321 1359 chr2R 23730303 23730311 chr2R 24658490 24658494 4 928181 15.0 16.0 15.5 0.2 928191 chr2R 23730303 intron Sesn + chr2R 24194398 exon ocm + chr2R 24658494 intergenic not near genes chr2R_4_24190001 chr2R_24190001 RAL-321 1360 chr2R 24682060 24682102 chr2R 24682169 24682211 20 109 8.0 7.5 7.8 2.3 151 chr2R 24682060 intron Mmp1 - chr2R 24682136 intron Mmp1 - chr2R 24682211 intron Mmp1 - chr2R_20_24680001 chr2R_24680001 RAL-321 1361 chr2R 24727862 24727918 chr2R 24735390 24735420 mdg1 20 7518 3.0 8.0 5.5 3.1 7558 chr2R 24727862 intron Mid1 - chr2R 24731641 intron Mid1 - chr2R 24735420 intron Mid1 - chr2R_20_24730001 chr2R_24730001 RAL-321 1362 chr2R 24763593 24763643 chr2R 24765588 24765639 G2 13 1992 4.5 4.0 4.2 2.5 2046 chr2R 24763593 exon CG3894 + chr2R 24764616 intron CG3894 + chr2R 24765639 exon CG3894 + chr2R_13_24760001 chr2R_24760001 RAL-321 1363 chr2R 24767978 24768020 chr2R 24768084 24768116 18 101 3.5 5.5 4.5 3.3 138 chr2R 24767978 5` UTR GstE12 - chr2R 24768047 5` UTR GstE12 - chr2R 24768116 5` UTR GstE12 - chr2R_18_24765001 chr2R_24765001 RAL-321 1364 chr2R 24861705 24861740 chr2R 24861811 24861826 14 99 7.0 6.5 6.8 1.8 121 chr2R 24861705 intergenic not near genes chr2R 24861766 intergenic not near genes chr2R 24861826 intergenic not near genes chr2R_14_24860001 chr2R_24860001 RAL-321 1365 chr2R 24880729 24880782 chr2R 24880830 24880883 23 100 7.0 7.0 7.0 2.9 154 chr2R 24880729 3` UTR CG44247 + chr2R 24880806 3` UTR CG44247 + chr2R 24880883 3` UTR CG44247 + chr2R_23_24880001 chr2R_24880001 RAL-321 1366 chr2R 24927829 24927875 chr2R 24927932 24927978 17 101 5.5 4.5 5.0 2.8 149 chr2R 24927829 intron pain - chr2R 24927904 intron pain - chr2R 24927978 intron pain - chr2R_17_24925001 chr2R_24925001 RAL-321 1367 chr2R 25076183 25076186 chr2R 25076502 25076659 5 350 27.5 16.0 21.8 0.2 476 chr2R 25076183 intron gol - chr2R 25076421 intron gol - chr2R 25076659 intron gol - chr2R_5_25075001 chr2R_25075001 RAL-321 1368 chr2R 25078967 25078985 chr2R 25079115 25079133 10 147 13.0 6.0 9.5 1.0 166 chr2R 25078967 intron gol - chr2R 25079050 intron gol - chr2R 25079133 intron gol - chr2R_10_25075001 chr2R_25075001 RAL-321 1369 chr2R 25078987 25079021 chr2R 25079113 25079134 22 143 6.0 5.5 5.8 3.2 147 chr2R 25078987 intron gol - chr2R 25079060 intron gol - chr2R 25079134 intron gol - chr2R_22_25075001 chr2R_25075001 RAL-321 1370 chr2R 25101259 25101309 chr2R 25101381 25101431 24 121 5.5 6.0 5.8 3.5 172 chr2R 25101259 intron lov - chr2R 25101345 intron lov - chr2R 25101431 intron lov - chr2R_24_25100001 chr2R_25100001 RAL-321 1371 chr2R 25104757 25104808 chr2R 25104902 25104953 21 144 4.5 3.0 3.8 4.4 196 chr2R 25104757 intron lov - chr2R 25104855 intron lov - chr2R 25104953 intron lov - chr2R_21_25100001 chr2R_25100001 RAL-321 1372 chr2R 25122957 25122993 chr2R 25123046 25123091 23 97 6.0 6.5 6.2 3.2 134 chr2R 25122957 intron lov - chr2R 25123024 intron lov - chr2R 25123091 intron lov - chr2R_23_25120001 chr2R_25120001 RAL-321 1373 chr2R 25141633 25141679 chr2R 25159343 25159389 roo 21 17710 8.5 9.0 8.8 2.1 17756 chr2R 25141633 intergenic not near genes chr2R 25150511 intergenic not near genes chr2R 25159389 intergenic not near genes chr2R_21_25150001 chr2R_25150001 RAL-321 1374 chr2R 25193324 25193370 chr2R 25193486 25193534 13 163 4.0 6.0 5.0 2.2 210 chr2R 25193324 intron CG9380 - chr2R 25193429 intron CG9380 - chr2R 25193534 intron CG9380 - chr2R_13_25190001 chr2R_25190001 RAL-321 1375 chr2R 25208971 25208989 chr2R 25209070 25209088 10 99 6.5 14.0 10.2 0.9 117 chr2R 25208971 intron CG9380 - chr2R 25209030 intron CG9380 - chr2R 25209088 intron CG9380 - chr2R_10_25205001 chr2R_25205001 RAL-321 1376 chr3L 52891 52934 chr3L 52994 53038 21 104 12.5 3.0 7.8 2.4 147 chr3L 52891 intergenic not near genes chr3L 52964 intergenic not near genes chr3L 53038 intergenic not near genes chr3L_21_50001 chr3L_50001 RAL-321 1377 chr3L 68961 69014 chr3L 69068 69121 17 106 7.0 3.5 5.2 2.7 160 chr3L 68961 3` UTR Lsp1gamma + chr3L 69041 intergenic Lsp1gamma +,CR44510 + chr3L 69121 intergenic CR44510 +,Lsp1gamma + chr3L_17_65001 chr3L_65001 RAL-321 1378 chr3L 86798 86806 chr3L 88723 88731 7 1925 36.0 41.5 38.8 0.2 1933 chr3L 86798 intergenic not near genes chr3L 87764 intergenic not near genes chr3L 88731 intergenic not near genes chr3L_7_85001 chr3L_85001 RAL-321 1379 chr3L 86809 86829 chr3L 88739 88754 4 1926 38.5 27.5 33.0 0.1 1945 chr3L 86809 intergenic not near genes chr3L 87782 intergenic not near genes chr3L 88754 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-321 1380 chr3L 88770 88775 chr3L 90709 90715 5 1939 7.0 16.0 11.5 0.4 1945 chr3L 88770 intergenic not near genes chr3L 89742 intergenic not near genes chr3L 90715 intergenic not near genes chr3L_5_85001 chr3L_85001 RAL-321 1381 chr3L 110194 110242 chr3L 119381 119429 roo 16 9186 4.0 8.0 6.0 2.3 9235 chr3L 110194 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119429 intergenic not near genes chr3L_16_110001 chr3L_110001 RAL-321 1382 chr3L 339443 339473 chr3L 339525 339576 15 97 2.0 4.0 3.0 3.8 133 chr3L 339443 intron,intron Ptpmeg +,mthl10 - chr3L 339510 intron,intron Ptpmeg +,mthl10 - chr3L 339576 intron,intron Ptpmeg +,mthl10 - chr3L_15_335001 chr3L_335001 RAL-321 1383 chr3L 343173 343176 chr3L 343316 343319 4 143 17.0 15.0 16.0 0.2 146 chr3L 343173 intron Ptpmeg + chr3L 343246 intron Ptpmeg + chr3L 343319 intron Ptpmeg + chr3L_4_340001 chr3L_340001 RAL-321 1384 chr3L 349367 349413 chr3L 349475 349521 20 106 4.5 6.0 5.2 3.2 154 chr3L 349367 intron Ptpmeg + chr3L 349444 intron Ptpmeg + chr3L 349521 intron Ptpmeg + chr3L_20_345001 chr3L_345001 RAL-321 1385 chr3L 402671 402693 chr3L 409744 409757 297 8 7070 11.5 8.0 9.8 0.7 7086 chr3L 402671 intergenic not near genes chr3L 406214 intergenic not near genes chr3L 409757 intergenic not near genes chr3L_8_405001 chr3L_405001 RAL-321 1386 chr3L 402694 402718 chr3L 409742 409791 297 12 7069 5.0 7.0 6.0 1.7 7097 chr3L 402694 intergenic not near genes chr3L 406242 intergenic not near genes chr3L 409791 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-321 1387 chr3L 459964 460009 chr3L 460061 460106 18 94 6.5 8.0 7.2 2.2 142 chr3L 459964 intron klar - chr3L 460035 intron klar - chr3L 460106 intron klar - chr3L_18_460001 chr3L_460001 RAL-321 1388 chr3L 535026 535078 chr3L 535128 535179 23 100 7.5 4.5 6.0 3.3 153 chr3L 535026 intron klar - chr3L 535102 intron klar - chr3L 535179 intron klar - chr3L_23_535001 chr3L_535001 RAL-321 1389 chr3L 555950 556004 chr3L 561082 561136 28 5133 46.0 46.5 46.2 0.6 5186 chr3L 555950 intron hipk + chr3L 558543 intron hipk + chr3L 561136 intron hipk + chr3L_28_555001 chr3L_555001 RAL-321 1390 chr3L 592947 592966 chr3L 593043 593062 12 96 5.0 7.5 6.2 1.7 115 chr3L 592947 intergenic MED14 + chr3L 593004 intergenic MED14 + chr3L 593062 intergenic MED14 + chr3L_12_590001 chr3L_590001 RAL-321 1391 chr3L 606877 606922 chr3L 606973 607021 14 98 6.0 6.0 6.0 2.0 144 chr3L 606877 intergenic Reg-2 - chr3L 606949 intergenic Reg-2 - chr3L 607021 intergenic Reg-2 - chr3L_14_605001 chr3L_605001 RAL-321 1392 chr3L 651367 651421 chr3L 651475 651523 31 107 7.5 7.5 7.5 3.6 156 chr3L 651367 intergenic Gale +,CG3402 - chr3L 651445 intergenic CG3402 -,Gale + chr3L 651523 intergenic CG3402 -,Gale + chr3L_31_650001 chr3L_650001 RAL-321 1393 chr3L 705882 705929 chr3L 705998 706045 20 116 9.0 9.0 9.0 2.0 163 chr3L 705882 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706045 3` UTR CG13895 - chr3L_20_705001 chr3L_705001 RAL-321 1394 chr3L 732805 732847 chr3L 733047 733089 17 238 4.0 10.0 7.0 2.1 284 chr3L 732805 intergenic not near genes chr3L 732947 intergenic not near genes chr3L 733089 intergenic not near genes chr3L_17_730001 chr3L_730001 RAL-321 1395 chr3L 759804 759840 chr3L 760004 760016 9 189 4.0 4.5 4.2 1.7 212 chr3L 759804 intergenic not near genes chr3L 759910 intergenic not near genes chr3L 760016 intergenic not near genes chr3L_9_755001 chr3L_755001 RAL-321 1396 chr3L 789895 789941 chr3L 790400 790445 roo 25 504 8.5 13.0 10.8 2.1 550 chr3L 789895 intergenic not near genes chr3L 790170 intergenic not near genes chr3L 790445 intergenic not near genes chr3L_25_790001 chr3L_790001 RAL-321 1397 chr3L 832586 832635 chr3L 832686 832735 27 98 5.0 6.5 5.8 4.0 149 chr3L 832586 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832660 intron CG13900 - chr3L 832735 exon CG13900 - chr3L_27_830001 chr3L_830001 RAL-321 1398 chr3L 857980 858016 chr3L 866480 866497 Tirant 8 8492 7.5 2.5 5.0 1.3 8517 chr3L 857980 intergenic not near genes chr3L 862238 intergenic not near genes chr3L 866497 intergenic CG12502 + chr3L_8_860001 chr3L_860001 RAL-321 1399 chr3L 884020 884033 chr3L 884471 884492 8 456 4.5 15.0 9.8 0.7 472 chr3L 884020 intron CG32479 + chr3L 884256 intron CG32479 + chr3L 884492 intron CG32479 + chr3L_8_880001 chr3L_880001 RAL-321 1400 chr3L 922151 922185 chr3L 922248 922287 20 94 10.5 4.5 7.5 2.4 136 chr3L 922151 intron Glut1 + chr3L 922219 intron Glut1 + chr3L 922287 intron Glut1 + chr3L_20_920001 chr3L_920001 RAL-321 1401 chr3L 925157 925206 chr3L 932603 932650 mdg1 16 7444 4.5 4.5 4.5 2.9 7493 chr3L 925157 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932650 intron Glut1 + chr3L_16_925001 chr3L_925001 RAL-321 1402 chr3L 939756 939799 chr3L 940897 940913 jockey 14 1138 6.5 10.5 8.5 1.5 1157 chr3L 939756 intron Glut1 + chr3L 940334 intron Glut1 + chr3L 940913 intron Glut1 + chr3L_14_940001 chr3L_940001 RAL-321 1403 chr3L 1047358 1047384 chr3L 1055177 1055179 412 6 7807 6.0 6.0 6.0 0.9 7821 chr3L 1047358 intron bab1 - chr3L 1051268 intron bab1 - chr3L 1055179 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-321 1404 chr3L 1061145 1061152 chr3L 1061244 1061251 4 99 13.0 6.0 9.5 0.4 106 chr3L 1061145 intron bab1 - chr3L 1061198 intron bab1 - chr3L 1061251 intron bab1 - chr3L_4_1060001 chr3L_1060001 RAL-321 1405 chr3L 1061162 1061178 chr3L 1061243 1061277 7 96 7.5 6.0 6.8 0.9 115 chr3L 1061162 intron bab1 - chr3L 1061220 intron bab1 - chr3L 1061277 intron bab1 - chr3L_7_1060001 chr3L_1060001 RAL-321 1406 chr3L 1095020 1095049 chr3L 1095100 1095150 12 93 6.0 3.5 4.8 2.1 130 chr3L 1095020 intron bab1 - chr3L 1095085 intron bab1 - chr3L 1095150 intron bab1 - chr3L_12_1095001 chr3L_1095001 RAL-321 1407 chr3L 1109624 1109661 chr3L 1109732 1109769 16 108 8.5 10.0 9.2 1.6 145 chr3L 1109624 intergenic not near genes chr3L 1109696 intergenic not near genes chr3L 1109769 intergenic not near genes chr3L_16_1105001 chr3L_1105001 RAL-321 1408 chr3L 1145220 1145262 chr3L 1145319 1145355 9 96 6.0 0.0 3.0 2.2 135 chr3L 1145220 intron bab2 - chr3L 1145288 intron bab2 - chr3L 1145355 intron bab2 - chr3L_9_1145001 chr3L_1145001 RAL-321 1409 chr3L 1154114 1154160 chr3L 1163284 1163330 roo 22 9169 4.5 7.0 5.8 3.2 9216 chr3L 1154114 intron bab2 - chr3L 1158722 intron bab2 - chr3L 1163330 intron bab2 - chr3L_22_1155001 chr3L_1155001 RAL-321 1410 chr3L 1219574 1219621 chr3L 1227327 1227369 412 16 7751 3.0 7.0 5.0 2.7 7795 chr3L 1219574 intron mwh + chr3L 1223472 intron mwh + chr3L 1227369 intron mwh + chr3L_16_1220001 chr3L_1220001 RAL-321 1411 chr3L 1310987 1311034 chr3L 1315837 1315874 16 4846 39.0 50.5 44.8 0.3 4887 chr3L 1310987 exon CG2469 + chr3L 1313430 intergenic CG9186 -,CG9153 + chr3L 1315874 exon CG9153 + chr3L_16_1310001 chr3L_1310001 RAL-321 1412 chr3L 1321545 1321589 chr3L 1321759 1321809 18 217 8.5 3.5 6.0 2.6 264 chr3L 1321545 intron Myo61F + chr3L 1321677 intron Myo61F + chr3L 1321809 intron,3` UTR Myo61F +,CG9184 - chr3L_18_1320001 chr3L_1320001 RAL-321 1413 chr3L 1358736 1358791 chr3L 1359137 1359192 21 396 6.0 0.5 3.2 5.0 456 chr3L 1358736 intron Ptp61F - chr3L 1358964 intron Ptp61F - chr3L 1359192 intron Ptp61F - chr3L_21_1355001 chr3L_1355001 RAL-321 1414 chr3L 1377889 1377933 chr3L 1378421 1378466 11 531 4.5 10.5 7.5 1.3 577 chr3L 1377889 intron,intron Ptp61F -,ru + chr3L 1378178 intron,intron Ptp61F -,ru + chr3L 1378466 intron,intron Ptp61F -,ru + chr3L_11_1375001 chr3L_1375001 RAL-321 1415 chr3L 1396718 1396744 chr3L 1396822 1396844 5 101 9.5 8.5 9.0 0.5 126 chr3L 1396718 intron Ptp61F - chr3L 1396781 intron Ptp61F - chr3L 1396844 intron Ptp61F - chr3L_5_1395001 chr3L_1395001 RAL-321 1416 chr3L 1402945 1402987 chr3L 1403337 1403353 16 387 7.5 5.0 6.2 2.2 408 chr3L 1402945 intron Ptp61F - chr3L 1403149 intron Ptp61F - chr3L 1403353 intron Ptp61F - chr3L_16_1400001 chr3L_1400001 RAL-321 1417 chr3L 1424751 1424772 chr3L 1430017 1430030 Rt1a 15 5264 2.0 8.0 5.0 2.5 5279 chr3L 1424751 intron Ptp61F - chr3L 1427390 intron Ptp61F - chr3L 1430030 intron Ptp61F - chr3L_15_1425001 chr3L_1425001 RAL-321 1418 chr3L 1505978 1506029 chr3L 1513595 1513646 17.6 26 7616 7.0 7.0 7.0 3.2 7668 chr3L 1505978 intron,intron Psa +,cue - chr3L 1509812 intron,intron Psa +,cue - chr3L 1513646 intron,intron Psa +,cue - chr3L_26_1505001 chr3L_1505001 RAL-321 1419 chr3L 1540567 1540599 chr3L 1540670 1540683 15 101 11.0 7.5 9.2 1.5 116 chr3L 1540567 exon CG7852 + chr3L 1540625 exon CG7852 + chr3L 1540683 intron CG7852 + chr3L_15_1540001 chr3L_1540001 RAL-321 1420 chr3L 1540600 1540606 chr3L 1540668 1540704 4 93 9.0 7.0 8.0 0.4 104 chr3L 1540600 exon CG7852 + chr3L 1540652 intron CG7852 + chr3L 1540704 intron CG7852 + chr3L_4_1540001 chr3L_1540001 RAL-321 1421 chr3L 1540608 1540609 chr3L 1540659 1540712 4 88 7.5 5.5 6.5 0.5 104 chr3L 1540608 exon CG7852 + chr3L 1540660 intron CG7852 + chr3L 1540712 intron CG7852 + chr3L_4_1540001 chr3L_1540001 RAL-321 1422 chr3L 1571449 1571479 chr3L 1571554 1571584 5 105 5.5 6.0 5.8 0.7 135 chr3L 1571449 intron CG12004 + chr3L 1571516 intron CG12004 + chr3L 1571584 intron CG12004 + chr3L_5_1570001 chr3L_1570001 RAL-321 1423 chr3L 1585916 1585935 chr3L 1586017 1586036 14 101 3.5 5.5 4.5 2.5 120 chr3L 1585916 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586036 intron CG13917 + chr3L_14_1585001 chr3L_1585001 RAL-321 1424 chr3L 1688426 1688437 chr3L 1688532 1688543 9 106 5.5 6.5 6.0 1.3 117 chr3L 1688426 intron CG7991 + chr3L 1688484 intron CG7991 + chr3L 1688543 intron CG7991 + chr3L_9_1685001 chr3L_1685001 RAL-321 1425 chr3L 1693528 1693537 chr3L 1693637 1693646 7 109 0.0 19.5 9.8 0.6 118 chr3L 1693528 intron CG7991 + chr3L 1693587 intron CG7991 + chr3L 1693646 intron CG7991 + chr3L_7_1690001 chr3L_1690001 RAL-321 1426 chr3L 1726591 1726646 chr3L 1726691 1726736 13 97 7.5 6.5 7.0 1.6 145 chr3L 1726591 intron drpr - chr3L 1726664 intron drpr - chr3L 1726736 intron drpr - chr3L_13_1725001 chr3L_1725001 RAL-321 1427 chr3L 1740842 1740852 chr3L 1741105 1741115 pogo 7 263 13.0 6.5 9.8 0.6 273 chr3L 1740842 intron Gk + chr3L 1740978 intron Gk + chr3L 1741115 intron Gk + chr3L_7_1740001 chr3L_1740001 RAL-321 1428 chr3L 1740855 1740887 chr3L 1741095 1741107 pogo 16 250 6.0 3.5 4.8 2.8 252 chr3L 1740855 intron Gk + chr3L 1740981 intron Gk + chr3L 1741107 intron Gk + chr3L_16_1740001 chr3L_1740001 RAL-321 1429 chr3L 1821621 1821634 chr3L 1821723 1821736 11 102 8.0 5.0 6.5 1.5 115 chr3L 1821621 intron GV1 + chr3L 1821678 intron GV1 + chr3L 1821736 intron GV1 + chr3L_11_1820001 chr3L_1820001 RAL-321 1430 chr3L 1879109 1879138 chr3L 1879207 1879236 16 97 7.0 0.0 3.5 3.6 127 chr3L 1879109 intron CG13937 - chr3L 1879172 intron CG13937 - chr3L 1879236 intron CG13937 - chr3L_16_1875001 chr3L_1875001 RAL-321 1431 chr3L 1882345 1882382 chr3L 1882461 1882486 6 113 7.5 1.0 4.2 1.2 141 chr3L 1882345 intron CG13937 - chr3L 1882416 intron CG13937 - chr3L 1882486 intron CG13937 - chr3L_6_1880001 chr3L_1880001 RAL-321 1432 chr3L 1885163 1885185 chr3L 1885258 1885285 7 99 0.0 11.0 5.5 1.1 122 chr3L 1885163 intergenic Aprt -,Tmhs + chr3L 1885224 intergenic Aprt -,Tmhs + chr3L 1885285 intergenic Aprt -,Tmhs + chr3L_7_1885001 chr3L_1885001 RAL-321 1433 chr3L 1908409 1908428 chr3L 1908785 1908804 9 375 10.5 0.5 5.5 1.4 395 chr3L 1908409 intron CG1887 - chr3L 1908606 intron CG1887 - chr3L 1908804 intron CG1887 - chr3L_9_1905001 chr3L_1905001 RAL-321 1434 chr3L 1924946 1924976 chr3L 1925104 1925134 15 157 4.5 5.0 4.8 2.6 188 chr3L 1924946 exon Dbx + chr3L 1925040 intron Dbx + chr3L 1925134 intron Dbx + chr3L_15_1925001 chr3L_1925001 RAL-321 1435 chr3L 1932053 1932078 chr3L 1932164 1932189 10 111 7.5 4.0 5.8 1.5 136 chr3L 1932053 intron Dbx + chr3L 1932121 intron Dbx + chr3L 1932189 intron Dbx + chr3L_10_1930001 chr3L_1930001 RAL-321 1436 chr3L 1988821 1988871 chr3L 1989020 1989057 18 194 1.0 4.5 2.8 4.7 236 chr3L 1988821 intergenic not near genes chr3L 1988939 intergenic not near genes chr3L 1989057 intergenic not near genes chr3L_18_1985001 chr3L_1985001 RAL-321 1437 chr3L 2007403 2007455 chr3L 2007511 2007539 5 102 1.5 0.0 0.8 2.8 136 chr3L 2007403 intergenic not near genes chr3L 2007471 intergenic not near genes chr3L 2007539 intergenic not near genes chr3L_5_2005001 chr3L_2005001 RAL-321 1438 chr3L 2107074 2107142 chr3L 2107208 2107260 17 120 0.0 4.0 2.0 5.7 186 chr3L 2107074 intron sls - chr3L 2107167 intron sls - chr3L 2107260 intron sls - chr3L_17_2105001 chr3L_2105001 RAL-321 1439 chr3L 2108229 2108282 chr3L 2113453 2113506 copia 25 5223 4.0 7.5 5.8 3.7 5277 chr3L 2108229 intron sls - chr3L 2110868 intron sls - chr3L 2113506 intron sls - chr3L_25_2110001 chr3L_2110001 RAL-321 1440 chr3L 2153391 2153441 chr3L 2153552 2153602 25 161 4.5 3.0 3.8 5.2 211 chr3L 2153391 3` UTR CG15822 - chr3L 2153496 3` UTR CG15822 - chr3L 2153602 3` UTR CG15822 - chr3L_25_2150001 chr3L_2150001 RAL-321 1441 chr3L 2199793 2199819 chr3L 2199889 2199913 21 95 0.5 8.5 4.5 3.8 120 chr3L 2199793 intergenic not near genes chr3L 2199853 intergenic not near genes chr3L 2199913 intergenic not near genes chr3L_21_2195001 chr3L_2195001 RAL-321 1442 chr3L 2277956 2278008 chr3L 2278172 2278224 27 214 8.0 7.0 7.5 3.2 268 chr3L 2277956 3` UTR yellow-g2 + chr3L 2278090 intergenic yellow-g2 + chr3L 2278224 intergenic yellow-g2 + chr3L_27_2275001 chr3L_2275001 RAL-321 1443 chr3L 2307982 2308036 chr3L 2308108 2308151 23 123 4.0 8.0 6.0 3.3 169 chr3L 2307982 intergenic not near genes chr3L 2308066 intergenic not near genes chr3L 2308151 intergenic not near genes chr3L_23_2305001 chr3L_2305001 RAL-321 1444 chr3L 2321137 2321192 chr3L 2321234 2321289 23 96 4.0 5.0 4.5 4.2 152 chr3L 2321137 intergenic not near genes chr3L 2321213 intergenic not near genes chr3L 2321289 intergenic not near genes chr3L_23_2320001 chr3L_2320001 RAL-321 1445 chr3L 2331567 2331613 chr3L 2331664 2331710 17 96 7.5 9.0 8.2 1.8 143 chr3L 2331567 intron MsR1 + chr3L 2331638 intron MsR1 + chr3L 2331710 intron MsR1 + chr3L_17_2330001 chr3L_2330001 RAL-321 1446 chr3L 2347066 2347072 chr3L 2347175 2347181 4 108 38.5 32.0 35.2 0.1 115 chr3L 2347066 intergenic not near genes chr3L 2347124 intergenic not near genes chr3L 2347181 intergenic not near genes chr3L_4_2345001 chr3L_2345001 RAL-321 1447 chr3L 2347077 2347104 chr3L 2347169 2347210 10 100 30.5 31.5 31.0 0.3 133 chr3L 2347077 intergenic not near genes chr3L 2347144 intergenic not near genes chr3L 2347210 intergenic not near genes chr3L_10_2345001 chr3L_2345001 RAL-321 1448 chr3L 2359949 2359994 chr3L 2360239 2360282 11 283 42.0 30.5 36.2 0.3 333 chr3L 2359949 intergenic not near genes chr3L 2360116 intergenic CG13801 + chr3L 2360282 intergenic CG13801 + chr3L_11_2360001 chr3L_2360001 RAL-321 1449 chr3L 2373492 2373536 chr3L 2373588 2373626 20 94 10.0 7.0 8.5 2.1 134 chr3L 2373492 intron mRpL23 - chr3L 2373559 intron mRpL23 - chr3L 2373626 intron mRpL23 - chr3L_20_2370001 chr3L_2370001 RAL-321 1450 chr3L 2411315 2411344 chr3L 2411415 2411444 17 97 0.5 5.0 2.8 4.5 129 chr3L 2411315 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411444 intron CG45186 + chr3L_17_2410001 chr3L_2410001 RAL-321 1451 chr3L 2447487 2447522 chr3L 2456663 2456673 roo 11 9169 10.0 7.0 8.5 1.2 9186 chr3L 2447487 intron CG45186 + chr3L 2452080 intron CG45186 + chr3L 2456673 intron CG45186 + chr3L_11_2450001 chr3L_2450001 RAL-321 1452 chr3L 2447524 2447532 chr3L 2456659 2456708 roo 10 9163 9.0 7.0 8.0 1.1 9184 chr3L 2447524 intron CG45186 + chr3L 2452116 intron CG45186 + chr3L 2456708 intron CG45186 + chr3L_10_2450001 chr3L_2450001 RAL-321 1453 chr3L 2524314 2524327 chr3L 2524497 2524510 13 183 7.5 6.5 7.0 1.6 196 chr3L 2524314 intron Spn - chr3L 2524412 intron Spn - chr3L 2524510 intron Spn - chr3L_13_2520001 chr3L_2520001 RAL-321 1454 chr3L 2533642 2533650 chr3L 2533744 2533747 6 99 5.5 10.5 8.0 0.7 105 chr3L 2533642 intron Spn - chr3L 2533694 intron Spn - chr3L 2533747 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-321 1455 chr3L 2533651 2533682 chr3L 2533738 2533764 5 93 2.5 10.0 6.2 0.7 113 chr3L 2533651 intron Spn - chr3L 2533708 intron Spn - chr3L 2533764 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-321 1456 chr3L 2534611 2534632 chr3L 2534714 2534735 13 102 0.0 12.5 6.2 1.8 124 chr3L 2534611 intron Spn - chr3L 2534673 intron Spn - chr3L 2534735 exon Spn - chr3L_13_2530001 chr3L_2530001 RAL-321 1457 chr3L 2534637 2534643 chr3L 2534699 2534739 4 86 0.0 7.5 3.8 0.8 102 chr3L 2534637 intron Spn - chr3L 2534688 intron Spn - chr3L 2534739 exon Spn - chr3L_4_2530001 chr3L_2530001 RAL-321 1458 chr3L 2581880 2581914 chr3L 2581994 2582028 14 114 5.0 9.0 7.0 1.8 148 chr3L 2581880 intron msn - chr3L 2581954 intron msn - chr3L 2582028 intron msn - chr3L_14_2580001 chr3L_2580001 RAL-321 1459 chr3L 2609660 2609682 chr3L 2609756 2609778 10 94 4.5 0.0 2.2 3.1 118 chr3L 2609660 intron Pxn - chr3L 2609719 intron Pxn - chr3L 2609778 intron Pxn - chr3L_10_2605001 chr3L_2605001 RAL-321 1460 chr3L 2683924 2683960 chr3L 2684020 2684056 24 95 7.5 4.0 5.8 3.5 132 chr3L 2683924 intron Fife - chr3L 2683990 intron Fife - chr3L 2684056 intron Fife - chr3L_24_2680001 chr3L_2680001 RAL-321 1461 chr3L 2751446 2751458 chr3L 2755761 2755773 F-element 5 4315 14.5 20.5 17.5 0.3 4327 chr3L 2751446 intron Mrtf - chr3L 2753610 intron Mrtf - chr3L 2755773 intron Mrtf - chr3L_5_2750001 chr3L_2750001 RAL-321 1462 chr3L 2766715 2766766 chr3L 2766832 2766881 25 116 5.0 5.5 5.2 4.0 166 chr3L 2766715 intergenic Mrtf -,Non2 + chr3L 2766798 intergenic Non2 +,Mrtf - chr3L 2766881 intergenic Non2 +,Mrtf - chr3L_25_2765001 chr3L_2765001 RAL-321 1463 chr3L 2795703 2795756 chr3L 2795846 2795899 13 143 4.5 6.0 5.2 2.1 196 chr3L 2795703 intron CG43444 - chr3L 2795801 intron CG43444 - chr3L 2795899 intron CG43444 - chr3L_13_2795001 chr3L_2795001 RAL-321 1464 chr3L 2812730 2812766 chr3L 2813091 2813127 20 361 7.0 4.0 5.5 3.1 397 chr3L 2812730 intron CG43444 - chr3L 2812928 intron CG43444 - chr3L 2813127 intron CG43444 - chr3L_20_2810001 chr3L_2810001 RAL-321 1465 chr3L 2927819 2927843 chr3L 2936116 2936140 Tirant 7 8297 10.0 5.5 7.8 0.8 8321 chr3L 2927819 intron Shab + chr3L 2931980 intron Shab + chr3L 2936140 intron Shab + chr3L_7_2930001 chr3L_2930001 RAL-321 1466 chr3L 2927846 2927862 chr3L 2936115 2936159 Tirant 7 8293 7.5 5.5 6.5 0.9 8313 chr3L 2927846 intron Shab + chr3L 2932002 intron Shab + chr3L 2936159 intron Shab + chr3L_7_2930001 chr3L_2930001 RAL-321 1467 chr3L 2966706 2966723 chr3L 2974151 2974168 mdg1 5 7445 12.0 7.0 9.5 0.5 7462 chr3L 2966706 intergenic not near genes chr3L 2970437 intergenic not near genes chr3L 2974168 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-321 1468 chr3L 3040306 3040331 chr3L 3042115 3042140 S-element 4 1809 6.0 0.0 3.0 1.0 1834 chr3L 3040306 3` UTR CG2162 + chr3L 3041223 intergenic not near genes chr3L 3042140 intergenic Jafrac2 + chr3L_4_3040001 chr3L_3040001 RAL-321 1469 chr3L 3051737 3051755 chr3L 3051993 3052009 pogo 5 256 6.5 4.5 5.5 0.8 272 chr3L 3051737 3` UTR CG32485 + chr3L 3051873 intergenic CG32485 + chr3L 3052009 intergenic CG32485 + chr3L_5_3050001 chr3L_3050001 RAL-321 1470 chr3L 3061295 3061309 chr3L 3069882 3069901 Tirant 5 8592 4.0 7.5 5.8 0.7 8606 chr3L 3061295 intron CG32486 - chr3L 3065598 intron CG32486 - chr3L 3069901 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-321 1471 chr3L 3102804 3102846 chr3L 3102901 3102932 21 96 6.0 5.5 5.8 3.1 128 chr3L 3102804 intron Cht7 - chr3L 3102868 intron Cht7 - chr3L 3102932 intron Cht7 - chr3L_21_3100001 chr3L_3100001 RAL-321 1472 chr3L 3107259 3107277 chr3L 3107365 3107382 9 105 5.5 10.5 8.0 1.0 123 chr3L 3107259 intergenic Cht7 - chr3L 3107320 intergenic Cht7 - chr3L 3107382 intergenic Cht7 - chr3L_9_3105001 chr3L_3105001 RAL-321 1473 chr3L 3114976 3115024 chr3L 3115080 3115129 20 102 6.5 7.0 6.8 2.6 153 chr3L 3114976 3` UTR prominin-like - chr3L 3115052 3` UTR prominin-like - chr3L 3115129 3` UTR prominin-like - chr3L_20_3115001 chr3L_3115001 RAL-321 1474 chr3L 3124046 3124090 chr3L 3124142 3124186 14 96 10.0 4.0 7.0 1.8 140 chr3L 3124046 intron prominin-like - chr3L 3124116 intron prominin-like - chr3L 3124186 intron prominin-like - chr3L_14_3120001 chr3L_3120001 RAL-321 1475 chr3L 3254067 3254116 chr3L 3254178 3254227 14 110 6.5 4.5 5.5 2.2 160 chr3L 3254067 5` UTR CR43626 + chr3L 3254147 5` UTR CR43626 + chr3L 3254227 5` UTR CR43626 + chr3L_14_3250001 chr3L_3250001 RAL-321 1476 chr3L 3257066 3257118 chr3L 3257263 3257300 18 194 4.0 5.5 4.8 3.1 234 chr3L 3257066 intergenic not near genes chr3L 3257183 intergenic not near genes chr3L 3257300 intergenic not near genes chr3L_18_3255001 chr3L_3255001 RAL-321 1477 chr3L 3259601 3259833 chr3L 3259715 3259953 33 115 4.0 7.0 5.5 5.1 352 chr3L 3259601 intron ckd + chr3L 3259777 intron ckd + chr3L 3259953 intron ckd + chr3L_33_3255001 chr3L_3255001 RAL-321 1478 chr3L 3269086 3269126 chr3L 3269197 3269230 11 109 0.0 4.5 2.2 3.4 144 chr3L 3269086 intergenic CG34265 + chr3L 3269158 intergenic CG34265 + chr3L 3269230 intergenic CG34265 + chr3L_11_3265001 chr3L_3265001 RAL-321 1479 chr3L 3281423 3281454 chr3L 3281939 3281969 Doc 13 508 8.5 8.5 8.5 1.4 546 chr3L 3281423 intron CG12017 + chr3L 3281696 intron CG12017 + chr3L 3281969 intron CG12017 + chr3L_13_3280001 chr3L_3280001 RAL-321 1480 chr3L 3281456 3281468 chr3L 3281937 3281941 Doc 8 504 6.0 7.5 6.8 1.0 485 chr3L 3281456 intron CG12017 + chr3L 3281698 intron CG12017 + chr3L 3281941 intron CG12017 + chr3L_8_3280001 chr3L_3280001 RAL-321 1481 chr3L 3294115 3294146 chr3L 3294226 3294254 16 110 5.5 5.0 5.2 2.6 139 chr3L 3294115 intron CG12009 + chr3L 3294184 intron CG12009 + chr3L 3294254 intron CG12009 + chr3L_16_3290001 chr3L_3290001 RAL-321 1482 chr3L 3328430 3328481 chr3L 3328552 3328603 27 121 5.0 3.5 4.2 5.2 173 chr3L 3328430 intron,exon CG11526 -,PHGPx + chr3L 3328516 intron,3` UTR CG11526 -,PHGPx + chr3L 3328603 intron,3` UTR CG11526 -,PHGPx + chr3L_27_3325001 chr3L_3325001 RAL-321 1483 chr3L 3475067 3475113 chr3L 3475522 3475562 jockey 16 460 2.5 7.5 5.0 2.7 495 chr3L 3475067 intron CG42324 + chr3L 3475314 intron CG42324 + chr3L 3475562 intron CG42324 + chr3L_16_3475001 chr3L_3475001 RAL-321 1484 chr3L 3484394 3484447 chr3L 3484491 3484544 26 94 4.5 3.0 3.8 5.4 150 chr3L 3484394 intron,intron CG42324 +,CG43074 - chr3L 3484469 intron,exon CG42324 +,CG43074 - chr3L 3484544 intron,intron CG42324 +,CG43074 - chr3L_26_3480001 chr3L_3480001 RAL-321 1485 chr3L 3517988 3518018 chr3L 3518090 3518120 6 99 4.0 1.0 2.5 1.7 132 chr3L 3517988 intron Eip63E + chr3L 3518054 intron Eip63E + chr3L 3518120 intron Eip63E + chr3L_6_3515001 chr3L_3515001 RAL-321 1486 chr3L 3565925 3565942 chr3L 3566016 3566038 10 94 9.0 4.5 6.8 1.3 113 chr3L 3565925 intron Eip63E + chr3L 3565982 intron Eip63E + chr3L 3566038 intron Eip63E + chr3L_10_3565001 chr3L_3565001 RAL-321 1487 chr3L 3565944 3565970 chr3L 3566014 3566043 11 78 4.5 4.0 4.2 2.1 99 chr3L 3565944 intron Eip63E + chr3L 3565994 intron Eip63E + chr3L 3566043 intron Eip63E + chr3L_11_3565001 chr3L_3565001 RAL-321 1488 chr3L 3566378 3566425 chr3L 3566481 3566528 24 103 5.0 5.0 5.0 4.0 150 chr3L 3566378 intron Eip63E + chr3L 3566453 intron Eip63E + chr3L 3566528 intron Eip63E + chr3L_24_3565001 chr3L_3565001 RAL-321 1489 chr3L 3577715 3577764 chr3L 3577813 3577862 17 98 7.5 5.5 6.5 2.3 147 chr3L 3577715 intron Eip63E + chr3L 3577788 intron Eip63E + chr3L 3577862 intron Eip63E + chr3L_17_3575001 chr3L_3575001 RAL-321 1490 chr3L 3601281 3601328 chr3L 3606612 3606659 copia 22 5329 5.0 8.0 6.5 2.9 5378 chr3L 3601281 intron Eip63E + chr3L 3603970 intron Eip63E + chr3L 3606659 intron Eip63E + chr3L_22_3600001 chr3L_3600001 RAL-321 1491 chr3L 3619384 3619434 chr3L 3619498 3619548 10 112 6.0 3.0 4.5 1.8 164 chr3L 3619384 intergenic not near genes chr3L 3619466 intergenic not near genes chr3L 3619548 intergenic not near genes chr3L_10_3615001 chr3L_3615001 RAL-321 1492 chr3L 3627320 3627354 chr3L 3627432 3627466 12 110 9.5 0.0 4.8 2.1 146 chr3L 3627320 intron dar1 + chr3L 3627393 intron dar1 + chr3L 3627466 intron dar1 + chr3L_12_3625001 chr3L_3625001 RAL-321 1493 chr3L 3648463 3648500 chr3L 3648562 3648593 13 97 4.5 4.5 4.5 2.4 130 chr3L 3648463 intron dar1 + chr3L 3648528 intron dar1 + chr3L 3648593 intron dar1 + chr3L_13_3645001 chr3L_3645001 RAL-321 1494 chr3L 3763736 3763764 chr3L 3763837 3763848 13 100 7.5 0.0 3.8 2.7 112 chr3L 3763736 intron CG32264 - chr3L 3763792 intron CG32264 - chr3L 3763848 intron CG32264 - chr3L_13_3760001 chr3L_3760001 RAL-321 1495 chr3L 3783252 3783283 chr3L 3783348 3783352 8 90 4.5 3.5 4.0 1.6 100 chr3L 3783252 intron CG32264 - chr3L 3783302 intron CG32264 - chr3L 3783352 intron CG32264 - chr3L_8_3780001 chr3L_3780001 RAL-321 1496 chr3L 3795484 3795532 chr3L 3795677 3795725 20 193 3.5 4.5 4.0 4.0 241 chr3L 3795484 intron CG32264 - chr3L 3795604 intron CG32264 - chr3L 3795725 intron CG32264 - chr3L_20_3795001 chr3L_3795001 RAL-321 1497 chr3L 3797221 3797266 chr3L 3797324 3797368 16 102 2.5 4.0 3.2 3.8 147 chr3L 3797221 intron CG32264 - chr3L 3797294 intron CG32264 - chr3L 3797368 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-321 1498 chr3L 3815032 3815079 chr3L 3815133 3815180 30 101 4.0 6.0 5.0 5.0 148 chr3L 3815032 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815180 intron,intron Scsalpha +,CR43932 - chr3L_30_3815001 chr3L_3815001 RAL-321 1499 chr3L 3833717 3833752 chr3L 3833978 3834013 pogo 9 260 6.0 1.5 3.8 1.9 296 chr3L 3833717 intron enc + chr3L 3833865 intron enc + chr3L 3834013 intron enc + chr3L_9_3830001 chr3L_3830001 RAL-321 1500 chr3L 3921382 3921391 chr3L 3921666 3921675 7 284 9.0 8.5 8.8 0.7 293 chr3L 3921382 intron Eip63F-1 - chr3L 3921528 intron Eip63F-1 - chr3L 3921675 intron Eip63F-1 - chr3L_7_3920001 chr3L_3920001 RAL-321 1501 chr3L 3921394 3921422 chr3L 3921658 3921706 12 282 5.0 7.5 6.2 1.7 312 chr3L 3921394 intron Eip63F-1 - chr3L 3921550 intron Eip63F-1 - chr3L 3921706 intron Eip63F-1 - chr3L_12_3920001 chr3L_3920001 RAL-321 1502 chr3L 4058823 4058870 chr3L 4058923 4058970 12 100 4.5 5.5 5.0 2.0 147 chr3L 4058823 3` UTR CG1136 + chr3L 4058896 3` UTR CG1136 + chr3L 4058970 3` UTR CG1136 + chr3L_12_4055001 chr3L_4055001 RAL-321 1503 chr3L 4098362 4098415 chr3L 4098586 4098639 21 221 10.5 6.0 8.2 2.3 277 chr3L 4098362 intron CG14995 - chr3L 4098500 intron CG14995 - chr3L 4098639 intron CG14995 - chr3L_21_4095001 chr3L_4095001 RAL-321 1504 chr3L 4099467 4099491 chr3L 4099568 4099592 16 101 6.0 8.0 7.0 2.0 125 chr3L 4099467 intron CG14995 - chr3L 4099530 intron CG14995 - chr3L 4099592 intron CG14995 - chr3L_16_4095001 chr3L_4095001 RAL-321 1505 chr3L 4146804 4146840 chr3L 4146906 4146942 20 102 0.0 7.5 3.8 4.2 138 chr3L 4146804 intergenic not near genes chr3L 4146873 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_20_4145001 chr3L_4145001 RAL-321 1506 chr3L 4170147 4170165 chr3L 4170245 4170263 8 98 3.0 5.0 4.0 1.6 116 chr3L 4170147 intergenic Ero1L + chr3L 4170205 intergenic Ero1L + chr3L 4170263 intergenic Ero1L + chr3L_8_4170001 chr3L_4170001 RAL-321 1507 chr3L 4187310 4187359 chr3L 4187488 4187542 25 181 4.5 4.5 4.5 4.5 232 chr3L 4187310 intron,intron CG18675 +,Teh2 - chr3L 4187426 intron,intron CG18675 +,Teh2 - chr3L 4187542 intron,intron CG18675 +,Teh2 - chr3L_25_4185001 chr3L_4185001 RAL-321 1508 chr3L 4229724 4229766 chr3L 4229828 4229844 11 88 6.5 8.0 7.2 1.3 120 chr3L 4229724 intron ImpL2 - chr3L 4229784 intron ImpL2 - chr3L 4229844 intron ImpL2 - chr3L_11_4225001 chr3L_4225001 RAL-321 1509 chr3L 4238720 4238749 chr3L 4238841 4238870 14 121 0.0 0.5 0.2 11.7 150 chr3L 4238720 intergenic not near genes chr3L 4238795 intergenic not near genes chr3L 4238870 intergenic not near genes chr3L_14_4235001 chr3L_4235001 RAL-321 1510 chr3L 4311777 4311815 chr3L 4311900 4311938 21 122 7.0 7.0 7.0 2.6 161 chr3L 4311777 intergenic not near genes chr3L 4311858 intergenic not near genes chr3L 4311938 intergenic not near genes chr3L_21_4310001 chr3L_4310001 RAL-321 1511 chr3L 4328739 4328764 chr3L 4336250 4336281 412 6 7513 3.0 5.5 4.2 1.2 7542 chr3L 4328739 intron Cip4 - chr3L 4332510 intron Cip4 - chr3L 4336281 exon Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-321 1512 chr3L 4337545 4337591 chr3L 4337674 4337720 12 124 5.5 5.0 5.2 1.9 175 chr3L 4337545 intron Cip4 - chr3L 4337632 intron Cip4 - chr3L 4337720 intron Cip4 - chr3L_12_4335001 chr3L_4335001 RAL-321 1513 chr3L 4342402 4342410 chr3L 4342493 4342503 11 97 13.0 12.0 12.5 0.8 101 chr3L 4342402 intron Cip4 - chr3L 4342452 intron Cip4 - chr3L 4342503 intron Cip4 - chr3L_11_4340001 chr3L_4340001 RAL-321 1514 chr3L 4342411 4342441 chr3L 4342487 4342540 17 92 6.0 8.0 7.0 2.1 129 chr3L 4342411 intron Cip4 - chr3L 4342476 intron Cip4 - chr3L 4342540 intron Cip4 - chr3L_17_4340001 chr3L_4340001 RAL-321 1515 chr3L 4438727 4438739 chr3L 4438827 4438839 4 100 7.5 7.5 7.5 0.5 112 chr3L 4438727 intergenic CG15021 + chr3L 4438783 intergenic CG15021 + chr3L 4438839 intergenic not near genes chr3L_4_4435001 chr3L_4435001 RAL-321 1516 chr3L 4440738 4440767 chr3L 4440836 4440868 5 100 3.0 2.0 2.5 1.4 130 chr3L 4440738 intergenic not near genes chr3L 4440803 intergenic not near genes chr3L 4440868 intergenic not near genes chr3L_5_4440001 chr3L_4440001 RAL-321 1517 chr3L 4516820 4516837 chr3L 4516917 4516933 11 97 11.5 9.0 10.2 1.0 113 chr3L 4516820 intron Tie - chr3L 4516876 intron Tie - chr3L 4516933 intron Tie - chr3L_11_4515001 chr3L_4515001 RAL-321 1518 chr3L 4516840 4516860 chr3L 4516916 4516957 8 94 7.0 8.5 7.8 0.9 117 chr3L 4516840 intron Tie - chr3L 4516898 intron Tie - chr3L 4516957 intron Tie - chr3L_8_4515001 chr3L_4515001 RAL-321 1519 chr3L 4576869 4576920 chr3L 4576979 4577030 10 108 0.0 0.0 0.0 10.0 161 chr3L 4576869 intron CG42540 + chr3L 4576950 intron CG42540 + chr3L 4577030 intron CG42540 + chr3L_10_4575001 chr3L_4575001 RAL-321 1520 chr3L 4676017 4676053 chr3L 4676117 4676154 8 100 6.0 7.0 6.5 1.1 137 chr3L 4676017 intron axo - chr3L 4676086 intron axo - chr3L 4676154 intron axo - chr3L_8_4675001 chr3L_4675001 RAL-321 1521 chr3L 4676712 4676726 chr3L 4677424 4677438 6 712 13.0 7.0 10.0 0.5 726 chr3L 4676712 intron axo - chr3L 4677075 intron axo - chr3L 4677438 intron axo - chr3L_6_4675001 chr3L_4675001 RAL-321 1522 chr3L 4676727 4676756 chr3L 4677417 4677468 10 702 5.5 5.5 5.5 1.5 741 chr3L 4676727 intron axo - chr3L 4677098 intron axo - chr3L 4677468 intron axo - chr3L_10_4675001 chr3L_4675001 RAL-321 1523 chr3L 4706064 4706111 chr3L 4706193 4706240 26 128 3.0 7.5 5.2 4.2 176 chr3L 4706064 intron RhoGEF64C + chr3L 4706152 intron RhoGEF64C + chr3L 4706240 intron RhoGEF64C + chr3L_26_4705001 chr3L_4705001 RAL-321 1524 chr3L 4769418 4769445 chr3L 4769562 4769589 17 144 5.5 7.5 6.5 2.3 171 chr3L 4769418 intron RhoGEF64C + chr3L 4769504 intron RhoGEF64C + chr3L 4769589 intron RhoGEF64C + chr3L_17_4765001 chr3L_4765001 RAL-321 1525 chr3L 4853418 4853467 chr3L 4853522 4853571 24 103 4.5 6.5 5.5 3.7 153 chr3L 4853418 intergenic not near genes chr3L 4853494 intergenic not near genes chr3L 4853571 intergenic not near genes chr3L_24_4850001 chr3L_4850001 RAL-321 1526 chr3L 4858303 4858337 chr3L 4858392 4858426 10 96 5.5 7.0 6.2 1.4 123 chr3L 4858303 intergenic not near genes chr3L 4858364 intergenic not near genes chr3L 4858426 intergenic not near genes chr3L_10_4855001 chr3L_4855001 RAL-321 1527 chr3L 4901110 4901161 chr3L 4907320 4907371 diver 12 6209 4.0 7.5 5.8 1.8 6261 chr3L 4901110 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907371 intergenic not near genes chr3L_12_4900001 chr3L_4900001 RAL-321 1528 chr3L 4907962 4907968 chr3L 4908058 4908064 4 96 7.5 5.0 6.2 0.6 102 chr3L 4907962 intergenic not near genes chr3L 4908013 intergenic not near genes chr3L 4908064 intergenic not near genes chr3L_4_4905001 chr3L_4905001 RAL-321 1529 chr3L 4942704 4942752 chr3L 4942804 4942842 25 97 6.5 5.0 5.8 3.7 138 chr3L 4942704 intron Con - chr3L 4942773 intron Con - chr3L 4942842 intron Con - chr3L_25_4940001 chr3L_4940001 RAL-321 1530 chr3L 4989173 4989190 chr3L 4989282 4989300 5 110 0.0 0.5 0.2 4.2 127 chr3L 4989173 intron Con - chr3L 4989236 intron Con - chr3L 4989300 intron Con - chr3L_5_4985001 chr3L_4985001 RAL-321 1531 chr3L 4991371 4991417 chr3L 4991515 4991561 18 143 5.5 8.5 7.0 2.2 190 chr3L 4991371 intron Con - chr3L 4991466 intron Con - chr3L 4991561 intron Con - chr3L_18_4990001 chr3L_4990001 RAL-321 1532 chr3L 5030747 5030800 chr3L 5030843 5030895 26 95 4.0 5.5 4.8 4.5 148 chr3L 5030747 intron Con - chr3L 5030821 intron Con - chr3L 5030895 intron Con - chr3L_26_5030001 chr3L_5030001 RAL-321 1533 chr3L 5034143 5034178 chr3L 5043315 5043345 roo 5 9171 8.0 0.5 4.2 1.0 9202 chr3L 5034143 intron Con - chr3L 5038744 intron Con - chr3L 5043345 intron Con - chr3L_5_5035001 chr3L_5035001 RAL-321 1534 chr3L 5045438 5045478 chr3L 5050239 5050279 Doc 13 4801 11.5 7.5 9.5 1.2 4841 chr3L 5045438 intron Con - chr3L 5047858 intron Con - chr3L 5050279 intron Con - chr3L_13_5045001 chr3L_5045001 RAL-321 1535 chr3L 5066282 5066327 chr3L 5066400 5066446 13 118 3.5 4.0 3.8 2.7 164 chr3L 5066282 intron Con - chr3L 5066364 intron Con - chr3L 5066446 intron Con - chr3L_13_5065001 chr3L_5065001 RAL-321 1536 chr3L 5081393 5081431 chr3L 5081986 5082037 17 599 5.0 1.5 3.2 4.0 644 chr3L 5081393 intergenic not near genes chr3L 5081715 intergenic not near genes chr3L 5082037 intergenic not near genes chr3L_17_5080001 chr3L_5080001 RAL-321 1537 chr3L 5103591 5103614 chr3L 5103691 5103708 5 99 11.5 0.0 5.8 0.7 117 chr3L 5103591 intergenic not near genes chr3L 5103650 intergenic not near genes chr3L 5103708 intergenic not near genes chr3L_5_5100001 chr3L_5100001 RAL-321 1538 chr3L 5104477 5104512 chr3L 5124626 5124666 23 20152 0.5 6.5 3.5 5.1 20189 chr3L 5104477 intergenic not near genes chr3L 5114572 intergenic not near genes chr3L 5124666 intergenic not near genes chr3L_23_5110001 chr3L_5110001 RAL-321 1539 chr3L 5223418 5223445 chr3L 5223505 5223527 7 87 5.5 7.5 6.5 0.9 109 chr3L 5223418 intron shep - chr3L 5223472 intron shep - chr3L 5223527 intron shep - chr3L_7_5220001 chr3L_5220001 RAL-321 1540 chr3L 5251851 5251869 chr3L 5251950 5251968 11 98 0.5 10.0 5.2 1.8 117 chr3L 5251851 intron shep - chr3L 5251910 intron shep - chr3L 5251968 intron shep - chr3L_11_5250001 chr3L_5250001 RAL-321 1541 chr3L 5299135 5299181 chr3L 5306591 5306637 Quasimodo 14 7456 7.0 8.5 7.8 1.6 7502 chr3L 5299135 intergenic not near genes chr3L 5302886 intergenic not near genes chr3L 5306637 intergenic not near genes chr3L_14_5300001 chr3L_5300001 RAL-321 1542 chr3L 5393454 5393467 chr3L 5393636 5393649 5 182 7.5 0.0 3.8 1.0 195 chr3L 5393454 intergenic not near genes chr3L 5393552 intergenic not near genes chr3L 5393649 intergenic not near genes chr3L_5_5390001 chr3L_5390001 RAL-321 1543 chr3L 5396490 5396499 chr3L 5396597 5396606 9 106 0.0 1.5 0.8 5.0 116 chr3L 5396490 intergenic not near genes chr3L 5396548 intergenic not near genes chr3L 5396606 intergenic not near genes chr3L_9_5395001 chr3L_5395001 RAL-321 1544 chr3L 5449516 5449558 chr3L 5449615 5449657 24 99 7.5 7.0 7.2 2.9 141 chr3L 5449516 intergenic not near genes chr3L 5449586 intergenic not near genes chr3L 5449657 intergenic not near genes chr3L_24_5445001 chr3L_5445001 RAL-321 1545 chr3L 5498368 5498432 chr3L 5498477 5498482 8 96 3.5 7.0 5.2 1.3 114 chr3L 5498368 exon blanks - chr3L 5498425 exon blanks - chr3L 5498482 exon blanks - chr3L_8_5495001 chr3L_5495001 RAL-321 1546 chr3L 5504539 5504569 chr3L 5504637 5504666 20 98 9.5 4.0 6.8 2.6 127 chr3L 5504539 intron CG34342 - chr3L 5504602 intron CG34342 - chr3L 5504666 intron CG34342 - chr3L_20_5500001 chr3L_5500001 RAL-321 1547 chr3L 5523814 5523863 chr3L 5524063 5524112 16 248 6.0 5.5 5.8 2.4 298 chr3L 5523814 intron Lkr - chr3L 5523963 intron Lkr - chr3L 5524112 intron Lkr - chr3L_16_5520001 chr3L_5520001 RAL-321 1548 chr3L 5526947 5526990 chr3L 5527053 5527111 6 111 8.5 0.5 4.5 1.1 164 chr3L 5526947 intron Lkr - chr3L 5527029 intron Lkr - chr3L 5527111 intron Lkr - chr3L_6_5525001 chr3L_5525001 RAL-321 1549 chr3L 5537702 5537756 chr3L 5538064 5538088 jockey 17 354 5.5 7.0 6.2 2.4 386 chr3L 5537702 intergenic not near genes chr3L 5537895 intergenic not near genes chr3L 5538088 intergenic CG10625 - chr3L_17_5535001 chr3L_5535001 RAL-321 1550 chr3L 5667609 5667621 chr3L 5667709 5667721 7 100 14.5 0.0 7.2 0.9 112 chr3L 5667609 intron sif + chr3L 5667665 intron sif + chr3L 5667721 intron sif + chr3L_7_5665001 chr3L_5665001 RAL-321 1551 chr3L 5683237 5683288 chr3L 5683345 5683383 18 104 3.5 7.5 5.5 2.8 146 chr3L 5683237 intron sif + chr3L 5683310 intron sif + chr3L 5683383 intron sif + chr3L_18_5680001 chr3L_5680001 RAL-321 1552 chr3L 5747438 5747472 chr3L 5747543 5747577 15 105 4.0 4.5 4.2 2.9 139 chr3L 5747438 3` UTR sif + chr3L 5747508 3` UTR sif + chr3L 5747577 3` UTR sif + chr3L_15_5745001 chr3L_5745001 RAL-321 1553 chr3L 5910013 5910062 chr3L 5910274 5910323 pogo 29 261 5.5 6.0 5.8 4.3 310 chr3L 5910013 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_29_5910001 chr3L_5910001 RAL-321 1554 chr3L 5926303 5926310 chr3L 5926509 5926520 6 208 16.0 6.0 11.0 0.5 217 chr3L 5926303 intron Vap-33B + chr3L 5926412 intron Vap-33B + chr3L 5926520 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-321 1555 chr3L 5926313 5926346 chr3L 5926508 5926556 BS 17 200 7.5 6.0 6.8 2.2 243 chr3L 5926313 intron Vap-33B + chr3L 5926434 intron Vap-33B + chr3L 5926556 intron Vap-33B + chr3L_17_5925001 chr3L_5925001 RAL-321 1556 chr3L 5940063 5940070 chr3L 5940175 5940177 4 110 15.5 4.5 10.0 0.4 114 chr3L 5940063 intron CG33993 - chr3L 5940120 intron CG33993 - chr3L 5940177 intron CG33993 - chr3L_4_5940001 chr3L_5940001 RAL-321 1557 chr3L 5940072 5940114 chr3L 5940174 5940210 21 97 7.5 4.5 6.0 3.0 138 chr3L 5940072 intron CG33993 - chr3L 5940141 intron CG33993 - chr3L 5940210 intron CG33993 - chr3L_21_5940001 chr3L_5940001 RAL-321 1558 chr3L 5970184 5970217 chr3L 5970277 5970321 8 84 2.0 6.5 4.2 1.5 137 chr3L 5970184 intron CG10479 - chr3L 5970252 intron CG10479 - chr3L 5970321 intron CG10479 - chr3L_8_5970001 chr3L_5970001 RAL-321 1559 chr3L 5983811 5983864 chr3L 5983952 5984005 20 140 7.5 0.0 3.8 4.2 194 chr3L 5983811 3` UTR CR45439 - chr3L 5983908 intergenic CR45439 -,CR45440 - chr3L 5984005 intergenic CR45440 -,CR45439 - chr3L_20_5980001 chr3L_5980001 RAL-321 1560 chr3L 6001665 6001680 chr3L 6004385 6004400 jockey 8 2720 0.5 3.0 1.8 2.9 2735 chr3L 6001665 intron PVRAP + chr3L 6003032 intron PVRAP + chr3L 6004400 intron PVRAP + chr3L_8_6000001 chr3L_6000001 RAL-321 1561 chr3L 6001690 6001714 chr3L 6004379 6004434 jockey 11 2717 0.5 3.0 1.8 3.9 2744 chr3L 6001690 intron PVRAP + chr3L 6003062 intron PVRAP + chr3L 6004434 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-321 1562 chr3L 6028362 6028371 chr3L 6028480 6028489 6 118 15.0 4.5 9.8 0.6 127 chr3L 6028362 intergenic not near genes chr3L 6028426 intergenic not near genes chr3L 6028489 intergenic not near genes chr3L_6_6025001 chr3L_6025001 RAL-321 1563 chr3L 6028372 6028391 chr3L 6028479 6028508 7 115 9.5 4.5 7.0 0.9 136 chr3L 6028372 intergenic not near genes chr3L 6028440 intergenic not near genes chr3L 6028508 intergenic not near genes chr3L_7_6025001 chr3L_6025001 RAL-321 1564 chr3L 6028392 6028408 chr3L 6028470 6028475 13 93 6.5 4.5 5.5 2.0 83 chr3L 6028392 intergenic not near genes chr3L 6028434 intergenic not near genes chr3L 6028475 intergenic not near genes chr3L_13_6025001 chr3L_6025001 RAL-321 1565 chr3L 6040346 6040394 chr3L 6042722 6042770 Doc 28 2375 8.0 6.5 7.2 3.4 2424 chr3L 6040346 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042770 intergenic not near genes chr3L_28_6040001 chr3L_6040001 RAL-321 1566 chr3L 6052640 6052663 chr3L 6052739 6052745 9 98 5.5 8.0 6.8 1.2 105 chr3L 6052640 exon Jon65Aii + chr3L 6052692 intron Jon65Aii + chr3L 6052745 exon Jon65Aii + chr3L_9_6050001 chr3L_6050001 RAL-321 1567 chr3L 6142489 6142526 chr3L 6142720 6142757 11 231 6.0 2.5 4.2 2.1 268 chr3L 6142489 intergenic Cpr65Aw - chr3L 6142623 intergenic Cpr65Aw - chr3L 6142757 intergenic Cpr65Aw - chr3L_11_6140001 chr3L_6140001 RAL-321 1568 chr3L 6155702 6155713 chr3L 6155808 6155819 9 106 9.5 0.0 4.8 1.6 117 chr3L 6155702 intergenic CR45421 - chr3L 6155760 intergenic not near genes chr3L 6155819 intergenic not near genes chr3L_9_6155001 chr3L_6155001 RAL-321 1569 chr3L 6162338 6162387 chr3L 6162439 6162474 9 92 2.0 3.5 2.8 2.4 136 chr3L 6162338 intergenic CR45744 - chr3L 6162406 intergenic CR45744 - chr3L 6162474 intergenic CR45744 - chr3L_9_6160001 chr3L_6160001 RAL-321 1570 chr3L 6169114 6169133 chr3L 6169213 6169232 6 99 12.5 14.0 13.2 0.4 118 chr3L 6169114 3` UTR CG10289 - chr3L 6169173 3` UTR CG10289 - chr3L 6169232 3` UTR CG10289 - chr3L_6_6165001 chr3L_6165001 RAL-321 1571 chr3L 6220899 6220946 chr3L 6230071 6230118 roo 33 9172 6.5 8.5 7.5 3.9 9219 chr3L 6220899 5` UTR pncr008:3L + chr3L 6225508 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_33_6225001 chr3L_6225001 RAL-321 1572 chr3L 6233299 6233342 chr3L 6233432 6233483 19 139 3.0 6.5 4.8 3.3 184 chr3L 6233299 5` UTR BG642312 - chr3L 6233391 intergenic BG642312 -,CG42714 - chr3L 6233483 intergenic CG42714 -,BG642312 - chr3L_19_6230001 chr3L_6230001 RAL-321 1573 chr3L 6332236 6332275 chr3L 6332342 6332382 11 107 2.0 0.0 1.0 5.5 146 chr3L 6332236 intron CG13300 - chr3L 6332309 intron CG13300 - chr3L 6332382 intron CG13300 - chr3L_11_6330001 chr3L_6330001 RAL-321 1574 chr3L 6334993 6335040 chr3L 6335481 6335531 297 10 491 2.5 2.0 2.2 3.1 538 chr3L 6334993 intron CG13300 - chr3L 6335262 intron CG13300 - chr3L 6335531 intron CG13300 - chr3L_10_6335001 chr3L_6335001 RAL-321 1575 chr3L 6405640 6405684 chr3L 6432124 6432168 roo 19 26484 8.5 9.5 9.0 1.9 26528 chr3L 6405640 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432168 intron CG42747 + chr3L_19_6415001 chr3L_6415001 RAL-321 1576 chr3L 6620594 6620606 chr3L 6621054 6621066 Rt1c 4 458 9.0 12.5 10.8 0.3 472 chr3L 6620594 intergenic not near genes chr3L 6620830 intergenic not near genes chr3L 6621066 intergenic not near genes chr3L_4_6620001 chr3L_6620001 RAL-321 1577 chr3L 6665795 6665845 chr3L 6665908 6665955 6 111 2.0 5.0 3.5 1.3 160 chr3L 6665795 intergenic eIF4E-4 -,CR45173 - chr3L 6665875 intergenic CR45173 -,eIF4E-4 - chr3L 6665955 intergenic CR45173 -,eIF4E-4 - chr3L_6_6665001 chr3L_6665001 RAL-321 1578 chr3L 6781103 6781148 chr3L 6783136 6783178 Doc 11 2032 7.0 0.0 3.5 2.4 2075 chr3L 6781103 intergenic not near genes chr3L 6782140 intergenic not near genes chr3L 6783178 intergenic not near genes chr3L_11_6780001 chr3L_6780001 RAL-321 1579 chr3L 6810079 6810086 chr3L 6810182 6810182 4 101 13.0 8.0 10.5 0.3 103 chr3L 6810079 intergenic not near genes chr3L 6810130 intergenic not near genes chr3L 6810182 intergenic not near genes chr3L_4_6810001 chr3L_6810001 RAL-321 1580 chr3L 6831186 6831195 chr3L 6831347 6831356 5 161 6.0 15.0 10.5 0.4 170 chr3L 6831186 intergenic not near genes chr3L 6831271 intergenic not near genes chr3L 6831356 intergenic not near genes chr3L_5_6830001 chr3L_6830001 RAL-321 1581 chr3L 6835913 6835922 chr3L 6836011 6836020 4 98 11.5 6.0 8.8 0.4 107 chr3L 6835913 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836020 intergenic not near genes chr3L_4_6835001 chr3L_6835001 RAL-321 1582 chr3L 6855917 6855955 chr3L 6860721 6860759 Doc 13 4801 3.5 9.0 6.2 1.8 4842 chr3L 6855917 intergenic not near genes chr3L 6858338 intergenic not near genes chr3L 6860759 intergenic not near genes chr3L_13_6855001 chr3L_6855001 RAL-321 1583 chr3L 6868704 6868740 chr3L 6868802 6868838 11 98 0.5 4.5 2.5 3.1 134 chr3L 6868704 intergenic not near genes chr3L 6868771 intergenic not near genes chr3L 6868838 intergenic not near genes chr3L_11_6865001 chr3L_6865001 RAL-321 1584 chr3L 6887498 6887544 chr3L 6895010 6895056 roo 15 7507 8.0 11.5 9.8 1.4 7558 chr3L 6887498 intergenic not near genes chr3L 6891277 intergenic not near genes chr3L 6895056 intergenic not near genes chr3L_15_6890001 chr3L_6890001 RAL-321 1585 chr3L 6934318 6934364 chr3L 6934449 6934470 14 129 3.5 4.0 3.8 2.9 152 chr3L 6934318 exon CG14820 + chr3L 6934394 intron CG14820 + chr3L 6934470 intron CG14820 + chr3L_14_6930001 chr3L_6930001 RAL-321 1586 chr3L 6955766 6955818 chr3L 6955866 6955917 27 98 6.5 5.0 5.8 4.0 151 chr3L 6955766 5` UTR CG10077 - chr3L 6955842 5` UTR CG10077 - chr3L 6955917 intergenic CG10077 -,CG9948 + chr3L_27_6955001 chr3L_6955001 RAL-321 1587 chr3L 6981929 6981937 chr3L 6982103 6982111 5 174 0.5 8.5 4.5 0.9 182 chr3L 6981929 intergenic not near genes chr3L 6982020 intergenic not near genes chr3L 6982111 intergenic not near genes chr3L_5_6980001 chr3L_6980001 RAL-321 1588 chr3L 6990699 6990750 chr3L 6990799 6990850 22 98 6.5 3.5 5.0 3.7 151 chr3L 6990699 5` UTR bin + chr3L 6990774 5` UTR bin + chr3L 6990850 exon bin + chr3L_22_6990001 chr3L_6990001 RAL-321 1589 chr3L 6994894 6994910 chr3L 6995497 6995541 BS 9 628 0.5 7.5 4.0 1.8 647 chr3L 6994894 intergenic bin + chr3L 6995218 intergenic not near genes chr3L 6995541 intergenic not near genes chr3L_9_6995001 chr3L_6995001 RAL-321 1590 chr3L 7001970 7001975 chr3L 7002111 7002116 4 141 8.0 10.0 9.0 0.4 146 chr3L 7001970 intron Mp + chr3L 7002043 intron Mp + chr3L 7002116 intron Mp + chr3L_4_7000001 chr3L_7000001 RAL-321 1591 chr3L 7013437 7013473 chr3L 7013545 7013596 9 115 7.5 0.0 3.8 1.9 159 chr3L 7013437 intron Mp + chr3L 7013516 intron Mp + chr3L 7013596 intron Mp + chr3L_9_7010001 chr3L_7010001 RAL-321 1592 chr3L 7090013 7090048 chr3L 7090108 7090149 25 100 11.0 9.0 10.0 2.3 136 chr3L 7090013 intergenic not near genes chr3L 7090081 intergenic not near genes chr3L 7090149 intergenic not near genes chr3L_25_7090001 chr3L_7090001 RAL-321 1593 chr3L 7112567 7112612 chr3L 7112674 7112719 22 107 6.5 7.0 6.8 2.8 152 chr3L 7112567 intron form3 + chr3L 7112643 intron form3 + chr3L 7112719 intron form3 + chr3L_22_7110001 chr3L_7110001 RAL-321 1594 chr3L 7150876 7150898 chr3L 7150972 7150994 8 96 3.0 10.0 6.5 1.1 118 chr3L 7150876 intron corn - chr3L 7150935 intron corn - chr3L 7150994 intron corn - chr3L_8_7150001 chr3L_7150001 RAL-321 1595 chr3L 7175634 7175667 chr3L 7175905 7175931 9 264 5.0 5.0 5.0 1.5 297 chr3L 7175634 intron Dscam2 - chr3L 7175782 intron Dscam2 - chr3L 7175931 intron Dscam2 - chr3L_9_7175001 chr3L_7175001 RAL-321 1596 chr3L 7177472 7177484 chr3L 7177566 7177591 6 102 9.5 7.5 8.5 0.6 119 chr3L 7177472 intron Dscam2 - chr3L 7177532 intron Dscam2 - chr3L 7177591 intron Dscam2 - chr3L_6_7175001 chr3L_7175001 RAL-321 1597 chr3L 7187382 7187418 chr3L 7187484 7187520 13 102 0.0 0.0 0.0 13.0 138 chr3L 7187382 intron Dscam2 - chr3L 7187451 intron Dscam2 - chr3L 7187520 intron Dscam2 - chr3L_13_7185001 chr3L_7185001 RAL-321 1598 chr3L 7258912 7258933 chr3L 7259072 7259073 7 157 4.5 8.0 6.2 1.0 161 chr3L 7258912 intron CG14830 - chr3L 7258992 intron CG14830 - chr3L 7259073 intron CG14830 - chr3L_7_7255001 chr3L_7255001 RAL-321 1599 chr3L 7276187 7276238 chr3L 7276291 7276341 12 104 7.5 7.0 7.2 1.5 154 chr3L 7276187 intron unc-13-4A - chr3L 7276264 intron unc-13-4A - chr3L 7276341 intron unc-13-4A - chr3L_12_7275001 chr3L_7275001 RAL-321 1600 chr3L 7285429 7285477 chr3L 7285527 7285575 16 98 6.0 1.0 3.5 3.6 146 chr3L 7285429 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285575 intron unc-13-4A - chr3L_16_7285001 chr3L_7285001 RAL-321 1601 chr3L 7328999 7329027 chr3L 7329106 7329134 8 107 0.0 3.0 1.5 3.2 135 chr3L 7328999 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329066 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329134 5` UTR,5` UTR CG42307 +,mus312 + chr3L_8_7325001 chr3L_7325001 RAL-321 1602 chr3L 7355684 7355721 chr3L 7362673 7362690 4 6986 41.0 34.5 37.8 0.1 7006 chr3L 7355684 exon CTCF - chr3L 7359187 exon pst - chr3L 7362690 exon Sec63 + chr3L_4_7355001 chr3L_7355001 RAL-321 1603 chr3L 7355677 7355687 chr3L 7362692 7362697 5 7005 42.0 30.5 36.2 0.1 7020 chr3L 7355677 exon CTCF - chr3L 7359187 exon pst - chr3L 7362697 exon Sec63 + chr3L_5_7355001 chr3L_7355001 RAL-321 1604 chr3L 7377294 7377346 chr3L 7380419 7380471 297 20 3123 5.5 6.5 6.0 2.9 3177 chr3L 7377294 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380471 intron SMSr - chr3L_20_7375001 chr3L_7375001 RAL-321 1605 chr3L 7420094 7420144 chr3L 7420194 7420244 24 96 5.0 7.0 6.0 3.4 150 chr3L 7420094 intergenic not near genes chr3L 7420169 intergenic not near genes chr3L 7420244 intergenic not near genes chr3L_24_7420001 chr3L_7420001 RAL-321 1606 chr3L 7444003 7444023 chr3L 7444121 7444141 12 118 7.5 0.0 3.8 2.5 138 chr3L 7444003 intron CG42458 + chr3L 7444072 intron CG42458 + chr3L 7444141 intron CG42458 + chr3L_12_7440001 chr3L_7440001 RAL-321 1607 chr3L 7498744 7498785 chr3L 7503541 7503582 F-element 16 4797 8.0 9.5 8.8 1.6 4838 chr3L 7498744 5` UTR CG8539 - chr3L 7501163 intergenic not near genes chr3L 7503582 intergenic not near genes chr3L_16_7500001 chr3L_7500001 RAL-321 1608 chr3L 7505416 7505433 chr3L 7505512 7505529 10 96 2.0 11.0 6.5 1.3 113 chr3L 7505416 intergenic CG7548 - chr3L 7505472 intergenic CG7548 - chr3L 7505529 intergenic CG7548 - chr3L_10_7505001 chr3L_7505001 RAL-321 1609 chr3L 7508658 7508704 chr3L 7508762 7508808 25 104 4.0 4.0 4.0 5.0 150 chr3L 7508658 intergenic not near genes chr3L 7508733 intergenic not near genes chr3L 7508808 intergenic not near genes chr3L_25_7505001 chr3L_7505001 RAL-321 1610 chr3L 7576195 7576243 chr3L 7576303 7576351 20 108 7.0 7.0 7.0 2.5 156 chr3L 7576195 intergenic not near genes chr3L 7576273 intergenic not near genes chr3L 7576351 intergenic not near genes chr3L_20_7575001 chr3L_7575001 RAL-321 1611 chr3L 7581603 7581655 chr3L 7581707 7581738 19 99 7.5 8.0 7.8 2.2 135 chr3L 7581603 intergenic not near genes chr3L 7581670 intergenic not near genes chr3L 7581738 intergenic not near genes chr3L_19_7580001 chr3L_7580001 RAL-321 1612 chr3L 7591130 7591181 chr3L 7591235 7591262 25 99 6.0 8.0 7.0 3.1 132 chr3L 7591130 intergenic CG7716 - chr3L 7591196 intergenic CG7716 - chr3L 7591262 intergenic CG7716 - chr3L_25_7590001 chr3L_7590001 RAL-321 1613 chr3L 7711813 7711845 chr3L 7711906 7711929 16 93 6.0 7.0 6.5 2.1 116 chr3L 7711813 intron,intron CG32373 +,Ank2 - chr3L 7711871 intron,intron CG32373 +,Ank2 - chr3L 7711929 intron,intron CG32373 +,Ank2 - chr3L_16_7710001 chr3L_7710001 RAL-321 1614 chr3L 7715014 7715060 chr3L 7715111 7715157 8 91 7.5 7.5 7.5 0.9 143 chr3L 7715014 intron,intron CG32373 +,Ank2 - chr3L 7715086 intron,intron CG32373 +,Ank2 - chr3L 7715157 intron,intron CG32373 +,Ank2 - chr3L_8_7715001 chr3L_7715001 RAL-321 1615 chr3L 7793697 7793742 chr3L 7800768 7800814 297 29 7072 8.5 5.0 6.8 3.7 7117 chr3L 7793697 intron CG32369 - chr3L 7797256 intron CG32369 - chr3L 7800814 intron CG32369 - chr3L_29_7795001 chr3L_7795001 RAL-321 1616 chr3L 7842689 7842715 chr3L 7842859 7842878 13 174 6.5 0.0 3.2 3.1 189 chr3L 7842689 intron Pdp1 - chr3L 7842784 intron Pdp1 - chr3L 7842878 intron Pdp1 - chr3L_13_7840001 chr3L_7840001 RAL-321 1617 chr3L 7886500 7886547 chr3L 7889038 7889085 Stalker4 21 2535 5.5 6.0 5.8 3.1 2585 chr3L 7886500 intron CG32365 + chr3L 7887792 intron CG32365 + chr3L 7889085 intron CG32365 + chr3L_21_7885001 chr3L_7885001 RAL-321 1618 chr3L 7903049 7903087 chr3L 7903150 7903189 19 102 1.0 11.5 6.2 2.6 140 chr3L 7903049 intron pbl - chr3L 7903119 intron pbl - chr3L 7903189 intron pbl - chr3L_19_7900001 chr3L_7900001 RAL-321 1619 chr3L 7916812 7916860 chr3L 7926003 7926051 roo 18 9191 4.0 7.0 5.5 2.8 9239 chr3L 7916812 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926051 3` UTR syd - chr3L_18_7920001 chr3L_7920001 RAL-321 1620 chr3L 7985345 7985391 chr3L 7987692 7987739 NOF 26 2346 6.0 5.0 5.5 4.0 2394 chr3L 7985345 intron nmo + chr3L 7986542 intron nmo + chr3L 7987739 intron nmo + chr3L_26_7985001 chr3L_7985001 RAL-321 1621 chr3L 7990853 7990874 chr3L 7990958 7990984 9 109 0.0 2.5 1.2 4.1 131 chr3L 7990853 intron nmo + chr3L 7990918 intron nmo + chr3L 7990984 intron nmo + chr3L_9_7990001 chr3L_7990001 RAL-321 1622 chr3L 8019681 8019731 chr3L 8024113 8024164 NOF 17 4426 6.0 3.5 4.8 2.9 4483 chr3L 8019681 intron nmo + chr3L 8021922 intron nmo + chr3L 8024164 intron nmo + chr3L_17_8020001 chr3L_8020001 RAL-321 1623 chr3L 8028263 8028314 chr3L 8028372 8028438 16 109 5.0 0.0 2.5 4.6 175 chr3L 8028263 intron nmo + chr3L 8028350 intron nmo + chr3L 8028438 intron nmo + chr3L_16_8025001 chr3L_8025001 RAL-321 1624 chr3L 8149749 8149795 chr3L 8149874 8149920 26 125 8.0 11.5 9.8 2.4 171 chr3L 8149749 intron CG13676 - chr3L 8149834 intron CG13676 - chr3L 8149920 intron CG13676 - chr3L_26_8145001 chr3L_8145001 RAL-321 1625 chr3L 8226700 8226734 chr3L 8226819 8226853 4 119 2.5 0.0 1.2 1.8 153 chr3L 8226700 intergenic not near genes chr3L 8226776 intergenic not near genes chr3L 8226853 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-321 1626 chr3L 8233575 8233579 chr3L 8238857 8238861 Rt1a 4 5282 9.0 14.5 11.8 0.3 5286 chr3L 8233575 intron CG7213 - chr3L 8236218 intron CG7213 - chr3L 8238861 intron,intron CG7213 -,Dscam4 + chr3L_4_8235001 chr3L_8235001 RAL-321 1627 chr3L 8274818 8274829 chr3L 8274952 8274962 7 134 3.5 0.0 1.8 2.5 144 chr3L 8274818 intron Dscam4 + chr3L 8274890 intron Dscam4 + chr3L 8274962 intron Dscam4 + chr3L_7_8270001 chr3L_8270001 RAL-321 1628 chr3L 8314757 8314770 chr3L 8314850 8314870 8 108 0.0 5.5 2.8 2.1 113 chr3L 8314757 intron CG7185 - chr3L 8314814 intron CG7185 - chr3L 8314870 intron CG7185 - chr3L_8_8310001 chr3L_8310001 RAL-321 1629 chr3L 8364502 8364536 chr3L 8364613 8364647 16 111 5.0 0.0 2.5 4.6 145 chr3L 8364502 intergenic not near genes chr3L 8364574 intergenic not near genes chr3L 8364647 intergenic not near genes chr3L_16_8360001 chr3L_8360001 RAL-321 1630 chr3L 8376629 8376676 chr3L 8376863 8376916 22 236 3.0 7.0 5.0 3.7 287 chr3L 8376629 intron ImpE1 + chr3L 8376772 intron ImpE1 + chr3L 8376916 intron ImpE1 + chr3L_22_8375001 chr3L_8375001 RAL-321 1631 chr3L 8383984 8383998 chr3L 8384069 8384083 4 90 7.0 8.5 7.8 0.5 99 chr3L 8383984 intron ImpE1 + chr3L 8384034 intron ImpE1 + chr3L 8384083 intron ImpE1 + chr3L_4_8380001 chr3L_8380001 RAL-321 1632 chr3L 8442896 8442906 chr3L 8442992 8443002 7 96 0.0 8.5 4.2 1.3 106 chr3L 8442896 intergenic CG6983 - chr3L 8442949 intergenic CG6983 - chr3L 8443002 intergenic CG6983 - chr3L_7_8440001 chr3L_8440001 RAL-321 1633 chr3L 8443553 8443582 chr3L 8443654 8443684 8 102 8.5 7.0 7.8 0.9 131 chr3L 8443553 3` UTR CG6983 - chr3L 8443618 3` UTR CG6983 - chr3L 8443684 3` UTR CG6983 - chr3L_8_8440001 chr3L_8440001 RAL-321 1634 chr3L 8481772 8481793 chr3L 8490951 8490961 roo 4 9176 7.0 12.5 9.8 0.4 9189 chr3L 8481772 intron CG43163 - chr3L 8486366 intron CG43163 - chr3L 8490961 intron CG43163 - chr3L_4_8485001 chr3L_8485001 RAL-321 1635 chr3L 8481794 8481800 chr3L 8490948 8490979 roo 8 9168 2.0 11.5 6.8 1.0 9185 chr3L 8481794 intron CG43163 - chr3L 8486386 intron CG43163 - chr3L 8490979 intron CG43163 - chr3L_8_8485001 chr3L_8485001 RAL-321 1636 chr3L 8498276 8498329 chr3L 8505763 8505776 blood 14 7483 8.0 7.5 7.8 1.6 7500 chr3L 8498276 intron CG43163 - chr3L 8502026 intron CG43163 - chr3L 8505776 intron CG43163 - chr3L_14_8500001 chr3L_8500001 RAL-321 1637 chr3L 8576953 8577000 chr3L 8577057 8577094 12 102 6.0 4.0 5.0 2.0 141 chr3L 8576953 5` UTR CG43078 + chr3L 8577024 5` UTR CG43078 + chr3L 8577094 5` UTR CG43078 + chr3L_12_8575001 chr3L_8575001 RAL-321 1638 chr3L 8627139 8627145 chr3L 8627251 8627257 4 112 0.0 0.0 0.0 4.0 118 chr3L 8627139 intron Zasp66 + chr3L 8627198 intron Zasp66 + chr3L 8627257 intron Zasp66 + chr3L_4_8625001 chr3L_8625001 RAL-321 1639 chr3L 8643557 8643605 chr3L 8643653 8643701 26 94 5.0 6.0 5.5 4.0 144 chr3L 8643557 3` UTR Cpr66D + chr3L 8643629 intergenic Cpr66D + chr3L 8643701 intergenic Cpr66D + chr3L_26_8640001 chr3L_8640001 RAL-321 1640 chr3L 8651861 8651865 chr3L 8651980 8651984 6 119 0.0 7.0 3.5 1.3 123 chr3L 8651861 intergenic not near genes chr3L 8651922 intergenic not near genes chr3L 8651984 intergenic not near genes chr3L_6_8650001 chr3L_8650001 RAL-321 1641 chr3L 8697273 8697289 chr3L 8697373 8697389 13 100 5.0 4.5 4.8 2.2 116 chr3L 8697273 intergenic not near genes chr3L 8697331 intergenic not near genes chr3L 8697389 intergenic not near genes chr3L_13_8695001 chr3L_8695001 RAL-321 1642 chr3L 8791258 8791275 chr3L 8796698 8796699 I-element 7 5438 13.5 0.0 6.8 0.9 5441 chr3L 8791258 exon Fhos + chr3L 8793978 intron Fhos + chr3L 8796699 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-321 1643 chr3L 8916545 8916567 chr3L 8916650 8916672 11 104 0.5 6.0 3.2 2.6 127 chr3L 8916545 intron Tsp66E + chr3L 8916608 intron Tsp66E + chr3L 8916672 intron Tsp66E + chr3L_11_8915001 chr3L_8915001 RAL-321 1644 chr3L 8950533 8950576 chr3L 8950647 8950670 21 110 10.0 8.0 9.0 2.1 137 chr3L 8950533 intron,intron CG43783 -,orb2 - chr3L 8950602 intron,intron CG43783 -,orb2 - chr3L 8950670 intron,intron CG43783 -,orb2 - chr3L_21_8950001 chr3L_8950001 RAL-321 1645 chr3L 8959379 8959393 chr3L 8959560 8959574 7 181 8.0 0.5 4.2 1.3 195 chr3L 8959379 intron CG13313 + chr3L 8959476 intron CG13313 + chr3L 8959574 intron CG13313 + chr3L_7_8955001 chr3L_8955001 RAL-321 1646 chr3L 9011109 9011140 chr3L 9011216 9011247 12 107 12.0 5.5 8.8 1.2 138 chr3L 9011109 intergenic not near genes chr3L 9011178 intergenic not near genes chr3L 9011247 intergenic not near genes chr3L_12_9010001 chr3L_9010001 RAL-321 1647 chr3L 9022735 9022786 chr3L 9022831 9022882 16 96 7.5 8.5 8.0 1.8 147 chr3L 9022735 intergenic not near genes chr3L 9022808 intergenic not near genes chr3L 9022882 intergenic not near genes chr3L_16_9020001 chr3L_9020001 RAL-321 1648 chr3L 9036275 9036291 chr3L 9036381 9036395 5 106 14.0 18.0 16.0 0.3 120 chr3L 9036275 intergenic not near genes chr3L 9036335 intergenic not near genes chr3L 9036395 intergenic not near genes chr3L_5_9035001 chr3L_9035001 RAL-321 1649 chr3L 9076914 9076940 chr3L 9084494 9084520 412 15 7578 11.5 12.0 11.8 1.2 7606 chr3L 9076914 exon Tequila + chr3L 9080717 intron Tequila + chr3L 9084520 exon Tequila + chr3L_15_9080001 chr3L_9080001 RAL-321 1650 chr3L 9076941 9076951 chr3L 9084491 9084531 412 8 7572 8.0 10.0 9.0 0.8 7590 chr3L 9076941 exon Tequila + chr3L 9080736 intron Tequila + chr3L 9084531 exon Tequila + chr3L_8_9080001 chr3L_9080001 RAL-321 1651 chr3L 9129423 9129468 chr3L 9129556 9129601 26 130 4.5 5.0 4.8 4.5 178 chr3L 9129423 intron bol - chr3L 9129512 intron bol - chr3L 9129601 intron bol - chr3L_26_9125001 chr3L_9125001 RAL-321 1652 chr3L 9130538 9130581 chr3L 9134318 9134362 412 10 3778 7.5 7.5 7.5 1.2 3824 chr3L 9130538 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134362 intergenic Dhpr + chr3L_10_9130001 chr3L_9130001 RAL-321 1653 chr3L 9164678 9164728 chr3L 9166165 9166165 hobo 21 1484 8.5 0.0 4.2 4.0 1487 chr3L 9164678 intron Rdl - chr3L 9165422 intron Rdl - chr3L 9166165 intron Rdl - chr3L_21_9165001 chr3L_9165001 RAL-321 1654 chr3L 9219229 9219238 chr3L 9219921 9219930 jockey 4 690 16.0 12.5 14.2 0.3 701 chr3L 9219229 intergenic not near genes chr3L 9219580 intergenic not near genes chr3L 9219930 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-321 1655 chr3L 9219239 9219273 chr3L 9219916 9219925 jockey 13 682 7.0 10.5 8.8 1.3 686 chr3L 9219239 intergenic not near genes chr3L 9219582 intergenic not near genes chr3L 9219925 intergenic not near genes chr3L_13_9215001 chr3L_9215001 RAL-321 1656 chr3L 9270598 9270651 chr3L 9278373 9278406 roo 14 7768 3.0 4.0 3.5 3.1 7808 chr3L 9270598 intron GluRIB + chr3L 9274502 intron GluRIB + chr3L 9278406 exon GluRIB + chr3L_14_9270001 chr3L_9270001 RAL-321 1657 chr3L 9344196 9344225 chr3L 9344291 9344323 9 95 0.0 11.0 5.5 1.4 127 chr3L 9344196 intron PGRP-LC + chr3L 9344260 intron PGRP-LC + chr3L 9344323 intron PGRP-LC + chr3L_9_9340001 chr3L_9340001 RAL-321 1658 chr3L 9347374 9347414 chr3L 9347471 9347511 19 97 2.0 8.5 5.2 3.1 137 chr3L 9347374 intron PGRP-LC + chr3L 9347442 intron PGRP-LC + chr3L 9347511 intron PGRP-LC + chr3L_19_9345001 chr3L_9345001 RAL-321 1659 chr3L 9348447 9348704 chr3L 9348969 9349084 17 513 0.0 0.0 0.0 17.0 637 chr3L 9348447 intergenic PGRP-LC + chr3L 9348766 intergenic PGRP-LC + chr3L 9349084 intergenic not near genes chr3L_17_9345001 chr3L_9345001 RAL-321 1660 chr3L 9359566 9359618 chr3L 9359677 9359729 28 111 6.0 5.5 5.8 4.1 163 chr3L 9359566 3` UTR CG32039 + chr3L 9359648 3` UTR CG32039 + chr3L 9359729 3` UTR CG32039 + chr3L_28_9355001 chr3L_9355001 RAL-321 1661 chr3L 9443494 9443540 chr3L 9445305 9445351 S-element 18 1805 3.0 5.0 4.0 3.6 1857 chr3L 9443494 intron CG33926 + chr3L 9444422 intron CG33926 + chr3L 9445351 intron CG33926 + chr3L_18_9440001 chr3L_9440001 RAL-321 1662 chr3L 9498180 9498233 chr3L 9498277 9498330 23 97 7.5 6.0 6.8 2.9 150 chr3L 9498180 intron path - chr3L 9498255 intron path - chr3L 9498330 intron path - chr3L_23_9495001 chr3L_9495001 RAL-321 1663 chr3L 9501682 9501697 chr3L 9502188 9502203 roo 9 506 9.5 0.0 4.8 1.6 521 chr3L 9501682 intron path - chr3L 9501942 intron path - chr3L 9502203 intron path - chr3L_9_9500001 chr3L_9500001 RAL-321 1664 chr3L 9501698 9501715 chr3L 9502185 9502221 roo 9 503 6.0 0.0 3.0 2.2 523 chr3L 9501698 intron path - chr3L 9501960 intron path - chr3L 9502221 intron path - chr3L_9_9500001 chr3L_9500001 RAL-321 1665 chr3L 9503443 9503462 chr3L 9503552 9503571 10 109 9.5 15.0 12.2 0.8 128 chr3L 9503443 intron path - chr3L 9503507 intron path - chr3L 9503571 intron path - chr3L_10_9500001 chr3L_9500001 RAL-321 1666 chr3L 9571881 9571900 chr3L 9572249 9572268 jockey 8 368 7.0 1.0 4.0 1.6 387 chr3L 9571881 intron CG42673 + chr3L 9572074 intron CG42673 + chr3L 9572268 intron CG42673 + chr3L_8_9570001 chr3L_9570001 RAL-321 1667 chr3L 9575890 9575902 chr3L 9580988 9580988 jockey 5 5096 12.0 6.0 9.0 0.5 5098 chr3L 9575890 intron CG42673 + chr3L 9578439 intron CG42673 + chr3L 9580988 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-321 1668 chr3L 9575907 9575941 chr3L 9580987 9581040 jockey 18 5092 7.5 6.0 6.8 2.3 5133 chr3L 9575907 intron CG42673 + chr3L 9578474 intron CG42673 + chr3L 9581040 intron CG42673 + chr3L_18_9575001 chr3L_9575001 RAL-321 1669 chr3L 9637832 9637884 chr3L 9637934 9637986 22 101 4.0 7.0 5.5 3.4 154 chr3L 9637832 exon fry - chr3L 9637909 intron fry - chr3L 9637986 intron fry - chr3L_22_9635001 chr3L_9635001 RAL-321 1670 chr3L 9639007 9639061 chr3L 9639112 9639166 18 105 0.0 6.5 3.2 4.3 159 chr3L 9639007 intron,3` UTR fry -,CG8329 + chr3L 9639086 intron fry - chr3L 9639166 intron fry - chr3L_18_9635001 chr3L_9635001 RAL-321 1671 chr3L 9652764 9652817 chr3L 9652996 9653049 23 232 6.5 6.0 6.2 3.2 285 chr3L 9652764 intron,intron fry -,CG33696 + chr3L 9652906 intron,intron fry -,CG33696 + chr3L 9653049 intron,intron fry -,CG33696 + chr3L_23_9650001 chr3L_9650001 RAL-321 1672 chr3L 9848008 9848016 chr3L 9848103 9848106 6 95 3.0 13.5 8.2 0.7 98 chr3L 9848008 intron RasGAP1 - chr3L 9848057 intron RasGAP1 - chr3L 9848106 intron RasGAP1 - chr3L_6_9845001 chr3L_9845001 RAL-321 1673 chr3L 9929670 9929679 chr3L 9938470 9938480 roo 9 8800 14.0 12.5 13.2 0.6 8810 chr3L 9929670 intron CG34356 + chr3L 9934075 intron CG34356 + chr3L 9938480 intron CG34356 + chr3L_9_9930001 chr3L_9930001 RAL-321 1674 chr3L 9929680 9929701 chr3L 9938461 9938502 roo 10 8799 6.0 11.0 8.5 1.1 8822 chr3L 9929680 intron CG34356 + chr3L 9934091 intron CG34356 + chr3L 9938502 intron CG34356 + chr3L_10_9930001 chr3L_9930001 RAL-321 1675 chr3L 9966782 9966833 chr3L 9970271 9970322 29 3495 53.0 37.5 45.2 0.6 3540 chr3L 9966782 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968552 5` UTR Nc + chr3L 9970322 exon Nc + chr3L_29_9965001 chr3L_9965001 RAL-321 1676 chr3L 9990520 9990526 chr3L 9990597 9990640 5 100 8.5 4.0 6.2 0.7 120 chr3L 9990520 intron dpr6 + chr3L 9990580 intron dpr6 + chr3L 9990640 intron dpr6 + chr3L_5_9990001 chr3L_9990001 RAL-321 1677 chr3L 10004069 10004115 chr3L 10004169 10004215 14 99 2.0 3.5 2.8 3.7 146 chr3L 10004069 exon dpr6 + chr3L 10004142 intron dpr6 + chr3L 10004215 intron dpr6 + chr3L_14_10000001 chr3L_10000001 RAL-321 1678 chr3L 10011579 10011621 chr3L 10011671 10011723 19 101 6.5 9.0 7.8 2.2 144 chr3L 10011579 intron dpr6 + chr3L 10011651 intron dpr6 + chr3L 10011723 intron dpr6 + chr3L_19_10010001 chr3L_10010001 RAL-321 1679 chr3L 10120259 10120311 chr3L 10120372 10120408 17 106 5.5 4.0 4.8 2.9 149 chr3L 10120259 intron dpr6 + chr3L 10120334 intron dpr6 + chr3L 10120408 intron dpr6 + chr3L_17_10120001 chr3L_10120001 RAL-321 1680 chr3L 10165641 10165650 chr3L 10165737 10165746 5 96 15.0 1.0 8.0 0.6 105 chr3L 10165641 intron dpr10 - chr3L 10165694 intron dpr10 - chr3L 10165746 intron dpr10 - chr3L_5_10165001 chr3L_10165001 RAL-321 1681 chr3L 10204056 10204093 chr3L 10204216 10204253 27 158 3.0 1.5 2.2 8.4 197 chr3L 10204056 intergenic not near genes chr3L 10204154 intergenic not near genes chr3L 10204253 intergenic not near genes chr3L_27_10200001 chr3L_10200001 RAL-321 1682 chr3L 10214792 10214830 chr3L 10214914 10214952 20 122 6.0 4.0 5.0 3.3 160 chr3L 10214792 intergenic not near genes chr3L 10214872 intergenic not near genes chr3L 10214952 intergenic not near genes chr3L_20_10210001 chr3L_10210001 RAL-321 1683 chr3L 10281697 10281747 chr3L 10281835 10281885 28 136 5.0 4.0 4.5 5.1 188 chr3L 10281697 intergenic not near genes chr3L 10281791 intergenic not near genes chr3L 10281885 intergenic not near genes chr3L_28_10280001 chr3L_10280001 RAL-321 1684 chr3L 10298649 10298702 chr3L 10298756 10298809 18 107 0.5 2.0 1.2 8.2 160 chr3L 10298649 intergenic not near genes chr3L 10298729 intergenic not near genes chr3L 10298809 intergenic not near genes chr3L_18_10295001 chr3L_10295001 RAL-321 1685 chr3L 10300034 10300060 chr3L 10300146 10300148 11 110 8.5 4.5 6.5 1.5 114 chr3L 10300034 intergenic not near genes chr3L 10300091 intergenic not near genes chr3L 10300148 intergenic not near genes chr3L_11_10300001 chr3L_10300001 RAL-321 1686 chr3L 10308732 10308772 chr3L 10308829 10308867 19 96 4.5 8.5 6.5 2.5 135 chr3L 10308732 intergenic not near genes chr3L 10308800 intergenic not near genes chr3L 10308867 intergenic not near genes chr3L_19_10305001 chr3L_10305001 RAL-321 1687 chr3L 10328097 10328126 chr3L 10328229 10328258 13 132 11.5 13.0 12.2 1.0 161 chr3L 10328097 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328258 intergenic not near genes chr3L_13_10325001 chr3L_10325001 RAL-321 1688 chr3L 10383193 10383245 chr3L 10383312 10383364 17 119 2.5 3.5 3.0 4.2 171 chr3L 10383193 intergenic not near genes chr3L 10383278 intergenic not near genes chr3L 10383364 intergenic not near genes chr3L_17_10380001 chr3L_10380001 RAL-321 1689 chr3L 10390229 10390267 chr3L 10390341 10390379 14 111 3.5 6.5 5.0 2.3 150 chr3L 10390229 intergenic not near genes chr3L 10390304 intergenic not near genes chr3L 10390379 intergenic not near genes chr3L_14_10390001 chr3L_10390001 RAL-321 1690 chr3L 10414928 10414953 chr3L 10417320 10417341 Doc 13 2390 2.0 9.0 5.5 2.0 2413 chr3L 10414928 intergenic CG12362 + chr3L 10416134 intergenic not near genes chr3L 10417341 intergenic not near genes chr3L_13_10415001 chr3L_10415001 RAL-321 1691 chr3L 10414955 10414971 chr3L 10417318 10417358 Doc 8 2388 2.0 8.5 5.2 1.3 2403 chr3L 10414955 intergenic CG12362 + chr3L 10416156 intergenic not near genes chr3L 10417358 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-321 1692 chr3L 10417561 10417579 chr3L 10417658 10417676 7 97 8.5 5.0 6.8 0.9 115 chr3L 10417561 intergenic not near genes chr3L 10417618 intergenic not near genes chr3L 10417676 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-321 1693 chr3L 10417583 10417599 chr3L 10417649 10417689 8 81 5.0 4.0 4.5 1.5 106 chr3L 10417583 intergenic not near genes chr3L 10417636 intergenic not near genes chr3L 10417689 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-321 1694 chr3L 10459690 10459742 chr3L 10459794 10459846 29 102 8.5 8.0 8.2 3.2 156 chr3L 10459690 3` UTR Gem3 - chr3L 10459768 3` UTR Gem3 - chr3L 10459846 3` UTR Gem3 - chr3L_29_10455001 chr3L_10455001 RAL-321 1695 chr3L 10584267 10584300 chr3L 10584374 10584407 17 107 6.0 6.0 6.0 2.4 140 chr3L 10584267 intron A2bp1 + chr3L 10584337 intron A2bp1 + chr3L 10584407 intron A2bp1 + chr3L_17_10580001 chr3L_10580001 RAL-321 1696 chr3L 10600437 10600476 chr3L 10600539 10600578 17 100 4.0 5.0 4.5 3.1 141 chr3L 10600437 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600578 intergenic not near genes chr3L_17_10600001 chr3L_10600001 RAL-321 1697 chr3L 10614750 10614796 chr3L 10614857 10614895 9 101 0.0 4.0 2.0 3.0 145 chr3L 10614750 intergenic not near genes chr3L 10614822 intergenic not near genes chr3L 10614895 intergenic not near genes chr3L_9_10610001 chr3L_10610001 RAL-321 1698 chr3L 10621829 10621873 chr3L 10621936 10621980 18 107 6.5 7.0 6.8 2.3 151 chr3L 10621829 intergenic not near genes chr3L 10621904 intergenic not near genes chr3L 10621980 intergenic not near genes chr3L_18_10620001 chr3L_10620001 RAL-321 1699 chr3L 10647691 10647743 chr3L 10647811 10647863 23 120 3.5 5.0 4.2 4.4 172 chr3L 10647691 intron CG32066 - chr3L 10647777 intron CG32066 - chr3L 10647863 intron CG32066 - chr3L_23_10645001 chr3L_10645001 RAL-321 1700 chr3L 10658058 10658212 chr3L 10658155 10658359 38 123 0.0 0.0 0.0 38.0 301 chr3L 10658058 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658359 intron CG32066 - chr3L_38_10655001 chr3L_10655001 RAL-321 1701 chr3L 10735813 10735829 chr3L 10735922 10735938 12 109 11.0 12.5 11.8 0.9 125 chr3L 10735813 intergenic not near genes chr3L 10735876 intergenic not near genes chr3L 10735938 intergenic not near genes chr3L_12_10735001 chr3L_10735001 RAL-321 1702 chr3L 10739801 10739806 chr3L 10739904 10739909 6 103 3.0 0.0 1.5 2.4 108 chr3L 10739801 intergenic not near genes chr3L 10739855 intergenic not near genes chr3L 10739909 intergenic not near genes chr3L_6_10735001 chr3L_10735001 RAL-321 1703 chr3L 10762819 10762861 chr3L 10762919 10762935 16 93 3.5 6.0 4.8 2.8 116 chr3L 10762819 intergenic not near genes chr3L 10762877 intergenic not near genes chr3L 10762935 intergenic not near genes chr3L_16_10760001 chr3L_10760001 RAL-321 1704 chr3L 10806849 10806869 chr3L 10807237 10807257 13 387 11.5 8.0 9.8 1.2 408 chr3L 10806849 intergenic not near genes chr3L 10807053 intergenic not near genes chr3L 10807257 intergenic not near genes chr3L_13_10805001 chr3L_10805001 RAL-321 1705 chr3L 10825505 10825550 chr3L 10825627 10825672 20 120 7.0 7.5 7.2 2.4 167 chr3L 10825505 5` UTR CR45246 + chr3L 10825588 5` UTR CR45246 + chr3L 10825672 intergenic CR45246 + chr3L_20_10825001 chr3L_10825001 RAL-321 1706 chr3L 10887363 10887378 chr3L 10887462 10887474 5 98 1.0 8.5 4.8 0.9 111 chr3L 10887363 intergenic not near genes chr3L 10887418 intergenic not near genes chr3L 10887474 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-321 1707 chr3L 10942048 10942062 chr3L 10942140 10942165 5 93 7.0 9.0 8.0 0.6 117 chr3L 10942048 intergenic not near genes chr3L 10942106 intergenic not near genes chr3L 10942165 intergenic not near genes chr3L_5_10940001 chr3L_10940001 RAL-321 1708 chr3L 10956431 10956464 chr3L 10956569 10956602 10 136 7.0 5.0 6.0 1.4 171 chr3L 10956431 intergenic not near genes chr3L 10956516 intergenic not near genes chr3L 10956602 intergenic not near genes chr3L_10_10955001 chr3L_10955001 RAL-321 1709 chr3L 10956993 10957033 chr3L 10957089 10957129 16 94 7.5 5.5 6.5 2.1 136 chr3L 10956993 intergenic not near genes chr3L 10957061 intergenic not near genes chr3L 10957129 intergenic not near genes chr3L_16_10955001 chr3L_10955001 RAL-321 1710 chr3L 11087055 11087088 chr3L 11088863 11088897 S-element 10 1807 5.0 8.5 6.8 1.3 1842 chr3L 11087055 intron JIL-1 - chr3L 11087976 intron JIL-1 - chr3L 11088897 intron JIL-1 - chr3L_10_11085001 chr3L_11085001 RAL-321 1711 chr3L 11105279 11105299 chr3L 11107010 11107030 X-element 10 1730 11.5 5.0 8.2 1.1 1751 chr3L 11105279 intergenic not near genes chr3L 11106154 intergenic not near genes chr3L 11107030 exon CG32073 - chr3L_10_11105001 chr3L_11105001 RAL-321 1712 chr3L 11105300 11105326 chr3L 11107006 11107056 X-element 12 1726 6.5 4.5 5.5 1.8 1756 chr3L 11105300 intergenic not near genes chr3L 11106178 intergenic not near genes chr3L 11107056 exon CG32073 - chr3L_12_11105001 chr3L_11105001 RAL-321 1713 chr3L 11107629 11107675 chr3L 11107935 11107981 18 305 11.5 6.5 9.0 1.8 352 chr3L 11107629 intergenic CG32073 - chr3L 11107805 intergenic CG32073 -,CG12522 + chr3L 11107981 intergenic CG12522 +,CG32073 - chr3L_18_11105001 chr3L_11105001 RAL-321 1714 chr3L 11127191 11127292 chr3L 11127288 11127358 5 91 0.0 0.0 0.0 5.0 167 chr3L 11127191 intron CG42575 + chr3L 11127274 intron CG42575 + chr3L 11127358 intron CG42575 + chr3L_5_11125001 chr3L_11125001 RAL-321 1715 chr3L 11131787 11131816 chr3L 11132071 11132081 12 281 7.0 5.0 6.0 1.7 294 chr3L 11131787 intron CG42575 + chr3L 11131934 intron,3` UTR CG42575 +,CG32074 - chr3L 11132081 intron,exon CG42575 +,CG32074 - chr3L_12_11130001 chr3L_11130001 RAL-321 1716 chr3L 11135508 11135525 chr3L 11135758 11135775 7 250 3.5 1.5 2.5 2.0 267 chr3L 11135508 intergenic CG14143 + chr3L 11135642 intergenic CG14143 +,CG32082 + chr3L 11135775 intergenic CG32082 +,CG14143 + chr3L_7_11135001 chr3L_11135001 RAL-321 1717 chr3L 11141440 11141466 chr3L 11141555 11141581 11 115 8.0 5.5 6.8 1.4 141 chr3L 11141440 intron CG32082 + chr3L 11141510 intron CG32082 + chr3L 11141581 intron CG32082 + chr3L_11_11140001 chr3L_11140001 RAL-321 1718 chr3L 11145538 11145550 chr3L 11145637 11145660 5 106 0.0 6.0 3.0 1.2 122 chr3L 11145538 intron CG32082 + chr3L 11145599 intron CG32082 + chr3L 11145660 intron CG32082 + chr3L_5_11145001 chr3L_11145001 RAL-321 1719 chr3L 11146210 11146223 chr3L 11146343 11146356 7 133 11.5 4.0 7.8 0.8 146 chr3L 11146210 intron CG32082 + chr3L 11146283 intron CG32082 + chr3L 11146356 intron CG32082 + chr3L_7_11145001 chr3L_11145001 RAL-321 1720 chr3L 11217488 11217535 chr3L 11217591 11217638 21 103 6.5 3.0 4.8 3.6 150 chr3L 11217488 intron CG42671 + chr3L 11217563 intron CG42671 + chr3L 11217638 intron CG42671 + chr3L_21_11215001 chr3L_11215001 RAL-321 1721 chr3L 11264448 11264495 chr3L 11271420 11271467 17.6 19 6970 10.5 9.5 10.0 1.7 7019 chr3L 11264448 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271467 intergenic not near genes chr3L_19_11265001 chr3L_11265001 RAL-321 1722 chr3L 11290604 11290656 chr3L 11290947 11290999 26 341 4.0 4.0 4.0 5.2 395 chr3L 11290604 intron CG6175 - chr3L 11290802 intron CG6175 - chr3L 11290999 intron CG6175 - chr3L_26_11290001 chr3L_11290001 RAL-321 1723 chr3L 11303027 11303041 chr3L 11303133 11303147 6 106 6.5 0.0 3.2 1.4 120 chr3L 11303027 intergenic not near genes chr3L 11303087 intergenic not near genes chr3L 11303147 intergenic not near genes chr3L_6_11300001 chr3L_11300001 RAL-321 1724 chr3L 11304603 11304636 chr3L 11304719 11304726 10 111 10.5 0.5 5.5 1.5 123 chr3L 11304603 intergenic not near genes chr3L 11304664 intergenic not near genes chr3L 11304726 intergenic not near genes chr3L_10_11300001 chr3L_11300001 RAL-321 1725 chr3L 11329693 11329726 chr3L 11332895 11332946 jockey 9 3217 9.5 9.0 9.2 0.9 3253 chr3L 11329693 intergenic not near genes chr3L 11331320 intergenic not near genes chr3L 11332946 intergenic not near genes chr3L_9_11330001 chr3L_11330001 RAL-321 1726 chr3L 11432885 11432938 chr3L 11432984 11433037 17 99 1.0 2.5 1.8 6.1 152 chr3L 11432885 intergenic not near genes chr3L 11432961 intergenic not near genes chr3L 11433037 intergenic not near genes chr3L_17_11430001 chr3L_11430001 RAL-321 1727 chr3L 11435541 11435574 chr3L 11435730 11435763 14 189 7.5 4.0 5.8 2.1 222 chr3L 11435541 intergenic CG6149 -,CR44548 + chr3L 11435652 5` UTR CR44548 + chr3L 11435763 5` UTR CR44548 + chr3L_14_11435001 chr3L_11435001 RAL-321 1728 chr3L 11435575 11435591 chr3L 11435729 11435779 10 184 3.0 4.0 3.5 2.2 204 chr3L 11435575 intergenic CR44548 +,CG6149 - chr3L 11435677 5` UTR CR44548 + chr3L 11435779 5` UTR CR44548 + chr3L_10_11435001 chr3L_11435001 RAL-321 1729 chr3L 11442775 11442782 chr3L 11442880 11442882 5 104 12.0 0.0 6.0 0.7 107 chr3L 11442775 intergenic not near genes chr3L 11442828 intergenic not near genes chr3L 11442882 intergenic not near genes chr3L_5_11440001 chr3L_11440001 RAL-321 1730 chr3L 11456886 11456916 chr3L 11457006 11457036 17 120 8.0 5.5 6.8 2.2 150 chr3L 11456886 intergenic CG12289 - chr3L 11456961 intergenic CG12289 - chr3L 11457036 intergenic CG12289 - chr3L_17_11455001 chr3L_11455001 RAL-321 1731 chr3L 11483775 11483799 chr3L 11483872 11483896 11 97 3.5 0.0 1.8 3.9 121 chr3L 11483775 intergenic not near genes chr3L 11483836 intergenic not near genes chr3L 11483896 intergenic not near genes chr3L_11_11480001 chr3L_11480001 RAL-321 1732 chr3L 11528211 11528261 chr3L 11528312 11528362 26 101 3.0 6.0 4.5 4.7 151 chr3L 11528211 intron Mob2 - chr3L 11528286 intron Mob2 - chr3L 11528362 intron Mob2 - chr3L_26_11525001 chr3L_11525001 RAL-321 1733 chr3L 11534828 11534859 chr3L 11534916 11534968 10 103 5.5 5.5 5.5 1.5 140 chr3L 11534828 intron Mob2 - chr3L 11534898 intron Mob2 - chr3L 11534968 intron Mob2 - chr3L_10_11530001 chr3L_11530001 RAL-321 1734 chr3L 11553711 11553758 chr3L 11553833 11553880 10 122 2.0 11.0 6.5 1.3 169 chr3L 11553711 intron Mob2 - chr3L 11553796 intron Mob2 - chr3L 11553880 intron Mob2 - chr3L_10_11550001 chr3L_11550001 RAL-321 1735 chr3L 11564795 11564806 chr3L 11572414 11572420 412 5 7617 6.0 8.5 7.2 0.6 7625 chr3L 11564795 exon CG33267 + chr3L 11568608 intron CG33267 + chr3L 11572420 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-321 1736 chr3L 11590249 11590273 chr3L 11590359 11590383 8 110 2.0 4.0 3.0 2.0 134 chr3L 11590249 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590383 intergenic CG7377 +,CG33268 - chr3L_8_11590001 chr3L_11590001 RAL-321 1737 chr3L 11676794 11676828 chr3L 11676879 11676930 17 94 5.0 6.5 5.8 2.5 136 chr3L 11676794 intron CG32085 - chr3L 11676862 intron CG32085 - chr3L 11676930 intron CG32085 - chr3L_17_11675001 chr3L_11675001 RAL-321 1738 chr3L 11723067 11723111 chr3L 11727882 11727926 Doc 18 4814 8.0 10.0 9.0 1.8 4859 chr3L 11723067 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727926 3` UTR Bmcp + chr3L_18_11725001 chr3L_11725001 RAL-321 1739 chr3L 11743996 11744019 chr3L 11744124 11744147 10 127 10.0 6.0 8.0 1.1 151 chr3L 11743996 exon CG6024 - chr3L 11744072 intron CG6024 - chr3L 11744147 intron CG6024 - chr3L_10_11740001 chr3L_11740001 RAL-321 1740 chr3L 11757900 11757930 chr3L 11758017 11758047 7 117 7.5 0.0 3.8 1.5 147 chr3L 11757900 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758047 intron CG6024 - chr3L_7_11755001 chr3L_11755001 RAL-321 1741 chr3L 11811434 11811488 chr3L 11811532 11811586 23 98 5.0 6.0 5.5 3.5 152 chr3L 11811434 intron CG42255 - chr3L 11811510 intron CG42255 - chr3L 11811586 exon CG42255 - chr3L_23_11810001 chr3L_11810001 RAL-321 1742 chr3L 11849311 11849354 chr3L 11849431 11849474 20 119 4.5 3.0 3.8 4.2 163 chr3L 11849311 intergenic not near genes chr3L 11849392 intergenic not near genes chr3L 11849474 intergenic not near genes chr3L_20_11845001 chr3L_11845001 RAL-321 1743 chr3L 11887241 11887286 chr3L 11887358 11887410 8 118 6.0 0.0 3.0 2.0 169 chr3L 11887241 intron CG44837 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887410 intron,3` UTR CG44837 -,CG5897 - chr3L_8_11885001 chr3L_11885001 RAL-321 1744 chr3L 11943473 11943520 chr3L 11943594 11943641 18 121 5.5 6.5 6.0 2.6 168 chr3L 11943473 3` UTR Rpt4R + chr3L 11943557 intergenic Rpt4R +,CG5883 - chr3L 11943641 3` UTR CG5883 - chr3L_18_11940001 chr3L_11940001 RAL-321 1745 chr3L 12013891 12013936 chr3L 12014002 12014047 19 111 4.5 2.0 3.2 4.5 156 chr3L 12013891 intron rols - chr3L 12013969 intron rols - chr3L 12014047 intron rols - chr3L_19_12010001 chr3L_12010001 RAL-321 1746 chr3L 12019315 12019351 chr3L 12019448 12019484 13 133 3.0 9.0 6.0 1.9 169 chr3L 12019315 intron rols - chr3L 12019400 intron rols - chr3L 12019484 intron rols - chr3L_13_12015001 chr3L_12015001 RAL-321 1747 chr3L 12046062 12046110 chr3L 12046160 12046208 25 98 6.5 8.0 7.2 3.0 146 chr3L 12046062 intron rols - chr3L 12046135 intron rols - chr3L 12046208 intron rols - chr3L_25_12045001 chr3L_12045001 RAL-321 1748 chr3L 12052683 12052737 chr3L 12052792 12052846 32 109 6.5 7.5 7.0 4.0 163 chr3L 12052683 intron rols - chr3L 12052764 intron rols - chr3L 12052846 intron rols - chr3L_32_12050001 chr3L_12050001 RAL-321 1749 chr3L 12075404 12075458 chr3L 12075513 12075562 19 108 2.5 0.0 1.2 8.6 158 chr3L 12075404 intron Sema-5c - chr3L 12075483 intron Sema-5c - chr3L 12075562 intron Sema-5c - chr3L_19_12075001 chr3L_12075001 RAL-321 1750 chr3L 12083932 12083971 chr3L 12084096 12084138 21 164 46.5 7.5 27.0 0.8 206 chr3L 12083932 intergenic not near genes chr3L 12084035 intergenic not near genes chr3L 12084138 intergenic not near genes chr3L_21_12080001 chr3L_12080001 RAL-321 1751 chr3L 12089062 12089108 chr3L 12089162 12089208 16 100 3.5 3.5 3.5 3.6 146 chr3L 12089062 exon CG17154 + chr3L 12089135 3` UTR CG17154 + chr3L 12089208 3` UTR CG17154 + chr3L_16_12085001 chr3L_12085001 RAL-321 1752 chr3L 12092381 12092421 chr3L 12092473 12092480 11 93 3.0 5.0 4.0 2.2 99 chr3L 12092381 intergenic not near genes chr3L 12092430 intergenic not near genes chr3L 12092480 intergenic not near genes chr3L_11_12090001 chr3L_12090001 RAL-321 1753 chr3L 12119738 12119789 chr3L 12119855 12119906 22 117 7.5 4.0 5.8 3.2 168 chr3L 12119738 3` UTR ssp + chr3L 12119822 intergenic ssp +,CG11560 + chr3L 12119906 intergenic CG11560 +,ssp + chr3L_22_12115001 chr3L_12115001 RAL-321 1754 chr3L 12286796 12286844 chr3L 12286896 12286944 19 99 0.0 11.0 5.5 2.9 148 chr3L 12286796 intergenic not near genes chr3L 12286870 intergenic not near genes chr3L 12286944 intergenic not near genes chr3L_19_12285001 chr3L_12285001 RAL-321 1755 chr3L 12369514 12369569 chr3L 12369624 12369679 26 109 4.0 3.0 3.5 5.8 165 chr3L 12369514 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369679 intron Ncc69 - chr3L_26_12365001 chr3L_12365001 RAL-321 1756 chr3L 12388007 12388011 chr3L 12388104 12388108 4 97 0.0 5.5 2.8 1.1 101 chr3L 12388007 intron Ncc69 - chr3L 12388058 intron Ncc69 - chr3L 12388108 intron Ncc69 - chr3L_4_12385001 chr3L_12385001 RAL-321 1757 chr3L 12412903 12412922 chr3L 12413005 12413024 11 102 4.0 3.5 3.8 2.3 121 chr3L 12412903 intron CG32103 - chr3L 12412964 intron CG32103 - chr3L 12413024 intron CG32103 - chr3L_11_12410001 chr3L_12410001 RAL-321 1758 chr3L 12435569 12435600 chr3L 12435655 12435695 11 92 6.0 7.5 6.8 1.4 126 chr3L 12435569 intergenic not near genes chr3L 12435632 intergenic not near genes chr3L 12435695 intergenic not near genes chr3L_11_12435001 chr3L_12435001 RAL-321 1759 chr3L 12458502 12458509 chr3L 12458621 12458628 4 119 2.0 12.5 7.2 0.5 126 chr3L 12458502 intergenic not near genes chr3L 12458565 intergenic not near genes chr3L 12458628 intergenic not near genes chr3L_4_12455001 chr3L_12455001 RAL-321 1760 chr3L 12460311 12460344 chr3L 12460408 12460441 12 97 0.0 7.5 3.8 2.5 130 chr3L 12460311 intergenic not near genes chr3L 12460376 intergenic not near genes chr3L 12460441 intergenic not near genes chr3L_12_12460001 chr3L_12460001 RAL-321 1761 chr3L 12467234 12467282 chr3L 12467339 12467387 18 104 0.0 3.5 1.8 6.4 153 chr3L 12467234 intron eyg - chr3L 12467310 intron eyg - chr3L 12467387 intron eyg - chr3L_18_12465001 chr3L_12465001 RAL-321 1762 chr3L 12491683 12491735 chr3L 12491786 12491838 4 100 0.0 4.5 2.2 1.2 155 chr3L 12491683 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491760 intergenic CG10657 -,CR45682 + chr3L 12491838 3` UTR CG10657 - chr3L_4_12490001 chr3L_12490001 RAL-321 1763 chr3L 12578044 12578075 chr3L 12578152 12578183 12 107 1.5 0.0 0.8 6.7 139 chr3L 12578044 intergenic not near genes chr3L 12578114 intergenic not near genes chr3L 12578183 intergenic not near genes chr3L_12_12575001 chr3L_12575001 RAL-321 1764 chr3L 12626135 12626161 chr3L 12626264 12626290 10 129 3.0 3.5 3.2 2.4 155 chr3L 12626135 intergenic not near genes chr3L 12626212 intergenic not near genes chr3L 12626290 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-321 1765 chr3L 12643238 12643286 chr3L 12643425 12643473 15 185 8.0 6.5 7.2 1.8 235 chr3L 12643238 intron CR32111 + chr3L 12643356 intron CR32111 + chr3L 12643473 intron CR32111 + chr3L_15_12640001 chr3L_12640001 RAL-321 1766 chr3L 12647930 12647964 chr3L 12648026 12648060 11 96 7.0 3.5 5.2 1.8 130 chr3L 12647930 5` UTR CR32111 + chr3L 12647995 5` UTR CR32111 + chr3L 12648060 5` UTR CR32111 + chr3L_11_12645001 chr3L_12645001 RAL-321 1767 chr3L 12706624 12706656 chr3L 12706771 12706803 13 147 11.0 8.5 9.8 1.2 179 chr3L 12706624 intron mirr + chr3L 12706714 intron mirr + chr3L 12706803 intron mirr + chr3L_13_12705001 chr3L_12705001 RAL-321 1768 chr3L 12799820 12799828 chr3L 12799948 12799956 5 128 6.5 13.0 9.8 0.5 136 chr3L 12799820 intron Atg1 - chr3L 12799888 intron Atg1 - chr3L 12799956 intron Atg1 - chr3L_5_12795001 chr3L_12795001 RAL-321 1769 chr3L 12874904 12874955 chr3L 12877216 12877267 jockey 18 2312 7.0 6.5 6.8 2.3 2363 chr3L 12874904 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877267 intergenic not near genes chr3L_18_12875001 chr3L_12875001 RAL-321 1770 chr3L 12894785 12894811 chr3L 12894883 12894909 10 97 13.0 8.5 10.8 0.8 124 chr3L 12894785 intergenic CG14118 + chr3L 12894847 intergenic CG14118 + chr3L 12894909 intergenic CG14118 + chr3L_10_12890001 chr3L_12890001 RAL-321 1771 chr3L 12896214 12896262 chr3L 12896312 12896319 8 85 10.0 3.5 6.8 1.0 105 chr3L 12896214 intergenic not near genes chr3L 12896266 intergenic not near genes chr3L 12896319 intergenic not near genes chr3L_8_12895001 chr3L_12895001 RAL-321 1772 chr3L 12898893 12898911 chr3L 12898963 12898971 11 85 4.0 7.0 5.5 1.7 78 chr3L 12898893 intergenic not near genes chr3L 12898932 intergenic not near genes chr3L 12898971 intergenic not near genes chr3L_11_12895001 chr3L_12895001 RAL-321 1773 chr3L 12957770 12957816 chr3L 12962269 12962318 copia 20 4500 6.0 6.0 6.0 2.9 4548 chr3L 12957770 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962318 intergenic not near genes chr3L_20_12960001 chr3L_12960001 RAL-321 1774 chr3L 12987350 12987386 chr3L 12987452 12987488 6 102 0.0 0.0 0.0 6.0 138 chr3L 12987350 intergenic not near genes chr3L 12987419 intergenic not near genes chr3L 12987488 intergenic not near genes chr3L_6_12985001 chr3L_12985001 RAL-321 1775 chr3L 13017902 13017916 chr3L 13018004 13018018 6 102 2.5 9.0 5.8 0.9 116 chr3L 13017902 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017960 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018018 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_6_13015001 chr3L_13015001 RAL-321 1776 chr3L 13074018 13074070 chr3L 13074171 13074224 21 152 8.5 7.5 8.0 2.3 206 chr3L 13074018 intergenic not near genes chr3L 13074121 intergenic not near genes chr3L 13074224 intergenic not near genes chr3L_21_13070001 chr3L_13070001 RAL-321 1777 chr3L 13085038 13085082 chr3L 13085137 13085170 16 96 4.5 7.0 5.8 2.4 132 chr3L 13085038 intergenic not near genes chr3L 13085104 intergenic not near genes chr3L 13085170 intergenic not near genes chr3L_16_13085001 chr3L_13085001 RAL-321 1778 chr3L 13123018 13123048 chr3L 13123114 13123134 10 92 7.0 3.5 5.2 1.6 116 chr3L 13123018 intergenic not near genes chr3L 13123076 intergenic not near genes chr3L 13123134 intergenic not near genes chr3L_10_13120001 chr3L_13120001 RAL-321 1779 chr3L 13182429 13182472 chr3L 13182526 13182570 14 98 7.0 0.5 3.8 2.9 141 chr3L 13182429 intergenic not near genes chr3L 13182500 intergenic not near genes chr3L 13182570 intergenic not near genes chr3L_14_13180001 chr3L_13180001 RAL-321 1780 chr3L 13197084 13197116 chr3L 13197228 13197253 6 138 0.0 11.5 5.8 0.9 169 chr3L 13197084 intergenic not near genes chr3L 13197168 intergenic not near genes chr3L 13197253 intergenic not near genes chr3L_6_13195001 chr3L_13195001 RAL-321 1781 chr3L 13223206 13223230 chr3L 13223302 13223324 7 94 6.5 14.5 10.5 0.6 118 chr3L 13223206 intergenic not near genes chr3L 13223265 intergenic not near genes chr3L 13223324 intergenic not near genes chr3L_7_13220001 chr3L_13220001 RAL-321 1782 chr3L 13264772 13264782 chr3L 13264868 13264878 7 96 11.5 4.0 7.8 0.8 106 chr3L 13264772 intron caps + chr3L 13264825 intron caps + chr3L 13264878 intron caps + chr3L_7_13260001 chr3L_13260001 RAL-321 1783 chr3L 13301251 13301256 chr3L 13301353 13301358 8 102 0.0 4.5 2.2 2.5 107 chr3L 13301251 intergenic SP + chr3L 13301304 intergenic SP + chr3L 13301358 intergenic SP + chr3L_8_13300001 chr3L_13300001 RAL-321 1784 chr3L 13337148 13337154 chr3L 13337259 13337265 4 111 0.0 6.5 3.2 1.0 117 chr3L 13337148 intergenic not near genes chr3L 13337206 intergenic not near genes chr3L 13337265 intergenic not near genes chr3L_4_13335001 chr3L_13335001 RAL-321 1785 chr3L 13361758 13361768 chr3L 13361863 13361873 4 105 3.5 4.0 3.8 0.8 115 chr3L 13361758 intergenic not near genes chr3L 13361816 intergenic not near genes chr3L 13361873 intergenic not near genes chr3L_4_13360001 chr3L_13360001 RAL-321 1786 chr3L 13361771 13361805 chr3L 13361861 13361910 14 104 1.0 4.0 2.5 4.0 139 chr3L 13361771 intergenic not near genes chr3L 13361840 intergenic not near genes chr3L 13361910 intergenic not near genes chr3L_14_13360001 chr3L_13360001 RAL-321 1787 chr3L 13477002 13477036 chr3L 13477099 13477133 18 97 0.0 5.5 2.8 4.7 131 chr3L 13477002 intergenic not near genes chr3L 13477068 intergenic stv + chr3L 13477133 intergenic stv + chr3L_18_13475001 chr3L_13475001 RAL-321 1788 chr3L 13525140 13525185 chr3L 13532956 13532990 roo 23 7813 9.5 8.5 9.0 2.3 7850 chr3L 13525140 intergenic not near genes chr3L 13529065 intergenic not near genes chr3L 13532990 intergenic not near genes chr3L_23_13525001 chr3L_13525001 RAL-321 1789 chr3L 13574605 13574616 chr3L 13580136 13580147 Rt1c 5 5531 5.5 4.0 4.8 0.9 5542 chr3L 13574605 intron bru-3 - chr3L 13577376 intron bru-3 - chr3L 13580147 intron bru-3 - chr3L_5_13575001 chr3L_13575001 RAL-321 1790 chr3L 13626673 13626713 chr3L 13626777 13626817 18 104 8.0 7.0 7.5 2.1 144 chr3L 13626673 intron bru-3 - chr3L 13626745 intron bru-3 - chr3L 13626817 intron bru-3 - chr3L_18_13625001 chr3L_13625001 RAL-321 1791 chr3L 13629515 13629545 chr3L 13629646 13629675 11 130 6.5 10.5 8.5 1.2 160 chr3L 13629515 intron bru-3 - chr3L 13629595 intron bru-3 - chr3L 13629675 intron bru-3 - chr3L_11_13625001 chr3L_13625001 RAL-321 1792 chr3L 13633393 13633440 chr3L 13633767 13633813 18 373 4.0 2.5 3.2 4.3 420 chr3L 13633393 intron bru-3 - chr3L 13633603 intron bru-3 - chr3L 13633813 intron bru-3 - chr3L_18_13630001 chr3L_13630001 RAL-321 1793 chr3L 13648871 13648883 chr3L 13648981 13648993 7 110 14.0 5.5 9.8 0.6 122 chr3L 13648871 intron bru-3 - chr3L 13648932 intron bru-3 - chr3L 13648993 intron bru-3 - chr3L_7_13645001 chr3L_13645001 RAL-321 1794 chr3L 13648886 13648922 chr3L 13648975 13649032 19 108 3.5 5.5 4.5 3.5 146 chr3L 13648886 intron bru-3 - chr3L 13648959 intron bru-3 - chr3L 13649032 intron bru-3 - chr3L_19_13645001 chr3L_13645001 RAL-321 1795 chr3L 13677508 13677561 chr3L 13677605 13677658 30 97 3.0 2.5 2.8 7.9 150 chr3L 13677508 intron bru-3 - chr3L 13677583 intron bru-3 - chr3L 13677658 intron bru-3 - chr3L_30_13675001 chr3L_13675001 RAL-321 1796 chr3L 13774620 13774660 chr3L 13774726 13774755 15 104 4.5 6.0 5.2 2.4 135 chr3L 13774620 intron bru-3 - chr3L 13774688 intron bru-3 - chr3L 13774755 intron bru-3 - chr3L_15_13770001 chr3L_13770001 RAL-321 1797 chr3L 13804525 13804577 chr3L 13822831 13822860 roo 22 18304 5.0 6.5 5.8 3.2 18335 chr3L 13804525 intergenic not near genes chr3L 13813692 intergenic not near genes chr3L 13822860 intergenic not near genes chr3L_22_13810001 chr3L_13810001 RAL-321 1798 chr3L 13841137 13841162 chr3L 13841242 13841269 7 106 0.0 4.0 2.0 2.3 132 chr3L 13841137 3` UTR CG8757 - chr3L 13841203 3` UTR CG8757 - chr3L 13841269 3` UTR CG8757 - chr3L_7_13840001 chr3L_13840001 RAL-321 1799 chr3L 13901549 13901598 chr3L 13901646 13901695 22 97 8.0 4.5 6.2 3.1 146 chr3L 13901549 intron dysc - chr3L 13901622 intron dysc - chr3L 13901695 5` UTR dysc - chr3L_22_13900001 chr3L_13900001 RAL-321 1800 chr3L 13920400 13920433 chr3L 13920500 13920533 14 100 7.0 4.0 5.5 2.2 133 chr3L 13920400 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920533 intron Rgl - chr3L_14_13920001 chr3L_13920001 RAL-321 1801 chr3L 13931313 13931371 chr3L 13931438 13931496 5 121 0.0 0.0 0.0 5.0 183 chr3L 13931313 intron Gl + chr3L 13931404 intron Gl + chr3L 13931496 intron Gl + chr3L_5_13930001 chr3L_13930001 RAL-321 1802 chr3L 13993996 13994000 chr3L 13994096 13994100 4 100 10.0 7.0 8.5 0.4 104 chr3L 13993996 intergenic 26-29-p + chr3L 13994048 intergenic 26-29-p + chr3L 13994100 intergenic 26-29-p + chr3L_4_13990001 chr3L_13990001 RAL-321 1803 chr3L 14076056 14076103 chr3L 14076155 14076202 18 99 3.5 4.0 3.8 3.8 146 chr3L 14076056 3` UTR,intron Pex1 +,btl + chr3L 14076129 intron btl + chr3L 14076202 intron btl + chr3L_18_14075001 chr3L_14075001 RAL-321 1804 chr3L 14107239 14107292 chr3L 14107336 14107340 11 93 5.5 1.0 3.2 2.6 101 chr3L 14107239 intron Sox21a - chr3L 14107290 intron Sox21a - chr3L 14107340 intron Sox21a - chr3L_11_14105001 chr3L_14105001 RAL-321 1805 chr3L 14118933 14118955 chr3L 14119043 14119068 10 108 7.5 8.0 7.8 1.1 135 chr3L 14118933 intron Sox21b - chr3L 14119000 intron Sox21b - chr3L 14119068 intron Sox21b - chr3L_10_14115001 chr3L_14115001 RAL-321 1806 chr3L 14118960 14118971 chr3L 14119040 14119084 7 102 5.0 7.0 6.0 1.0 124 chr3L 14118960 intron Sox21b - chr3L 14119022 intron Sox21b - chr3L 14119084 intron Sox21b - chr3L_7_14115001 chr3L_14115001 RAL-321 1807 chr3L 14141399 14141413 chr3L 14141506 14141520 4 107 5.5 0.0 2.8 1.1 121 chr3L 14141399 intergenic not near genes chr3L 14141460 intergenic not near genes chr3L 14141520 intergenic not near genes chr3L_4_14140001 chr3L_14140001 RAL-321 1808 chr3L 14185137 14185186 chr3L 14185233 14185256 20 95 6.5 5.0 5.8 2.9 119 chr3L 14185137 intergenic not near genes chr3L 14185196 intergenic not near genes chr3L 14185256 intergenic not near genes chr3L_20_14185001 chr3L_14185001 RAL-321 1809 chr3L 14194703 14194734 chr3L 14194799 14194830 14 96 7.0 2.5 4.8 2.4 127 chr3L 14194703 intron nuf + chr3L 14194766 intron nuf + chr3L 14194830 intron nuf + chr3L_14_14190001 chr3L_14190001 RAL-321 1810 chr3L 14234824 14234854 chr3L 14234941 14234971 16 116 13.5 7.5 10.5 1.4 147 chr3L 14234824 intergenic CG7924 +,CG34244 - chr3L 14234898 intergenic CG34244 -,CG7924 + chr3L 14234971 intergenic CG34244 -,CG7924 + chr3L_16_14230001 chr3L_14230001 RAL-321 1811 chr3L 14239972 14240007 chr3L 14240089 14240097 14 114 2.0 8.0 5.0 2.3 125 chr3L 14239972 intergenic not near genes chr3L 14240034 intergenic not near genes chr3L 14240097 intergenic not near genes chr3L_14_14240001 chr3L_14240001 RAL-321 1812 chr3L 14245558 14245568 chr3L 14245672 14245682 1360 5 114 11.0 4.0 7.5 0.6 124 chr3L 14245558 3` UTR CR44561 - chr3L 14245620 3` UTR CR44561 - chr3L 14245682 3` UTR CR44561 - chr3L_5_14245001 chr3L_14245001 RAL-321 1813 chr3L 14245569 14245594 chr3L 14245666 14245708 1360 17 111 6.5 2.5 4.5 3.1 139 chr3L 14245569 3` UTR CR44561 - chr3L 14245638 3` UTR CR44561 - chr3L 14245708 intergenic CR44561 -,CR44560 + chr3L_17_14245001 chr3L_14245001 RAL-321 1814 chr3L 14267176 14267223 chr3L 14267273 14267288 35 92 9.0 3.5 6.2 4.9 112 chr3L 14267176 intergenic not near genes chr3L 14267232 intergenic not near genes chr3L 14267288 intergenic not near genes chr3L_35_14265001 chr3L_14265001 RAL-321 1815 chr3L 14295960 14296014 chr3L 14296466 14296520 roo 16 504 5.0 5.0 5.0 2.7 560 chr3L 14295960 intron fz + chr3L 14296240 intron fz + chr3L 14296520 intron fz + chr3L_16_14295001 chr3L_14295001 RAL-321 1816 chr3L 14312029 14312052 chr3L 14316833 14316886 X-element 9 4823 2.5 1.5 2.0 3.0 4857 chr3L 14312029 exon fz + chr3L 14314458 intron fz + chr3L 14316886 intron fz + chr3L_9_14310001 chr3L_14310001 RAL-321 1817 chr3L 14332736 14332780 chr3L 14332848 14332892 16 112 6.5 4.5 5.5 2.5 156 chr3L 14332736 intron fz + chr3L 14332814 intron fz + chr3L 14332892 intron fz + chr3L_16_14330001 chr3L_14330001 RAL-321 1818 chr3L 14341420 14341439 chr3L 14341575 14341594 9 155 0.0 6.5 3.2 2.1 174 chr3L 14341420 intron fz + chr3L 14341507 intron fz + chr3L 14341594 intron fz + chr3L_9_14340001 chr3L_14340001 RAL-321 1819 chr3L 14369996 14370041 chr3L 14370097 14370142 16 96 5.5 7.5 6.5 2.1 146 chr3L 14369996 intergenic CG13481 - chr3L 14370069 intergenic CG13481 - chr3L 14370142 intergenic CG13481 - chr3L_16_14370001 chr3L_14370001 RAL-321 1820 chr3L 14411843 14411894 chr3L 14411942 14411993 23 97 5.5 4.5 5.0 3.8 150 chr3L 14411843 intron CG3919 + chr3L 14411918 intron CG3919 + chr3L 14411993 intron CG3919 + chr3L_23_14410001 chr3L_14410001 RAL-321 1821 chr3L 14462879 14462909 chr3L 14462987 14463017 18 108 0.0 6.5 3.2 4.3 138 chr3L 14462879 intron bbg - chr3L 14462948 intron bbg - chr3L 14463017 intron bbg - chr3L_18_14460001 chr3L_14460001 RAL-321 1822 chr3L 14468432 14468477 chr3L 14473658 14473703 copia 23 5226 3.0 6.5 4.8 4.0 5271 chr3L 14468432 intron bbg - chr3L 14471068 intron bbg - chr3L 14473703 intron bbg - chr3L_23_14470001 chr3L_14470001 RAL-321 1823 chr3L 14486010 14486035 chr3L 14486101 14486136 12 100 10.0 5.5 7.8 1.4 126 chr3L 14486010 intron bbg - chr3L 14486073 intron bbg - chr3L 14486136 intron bbg - chr3L_12_14485001 chr3L_14485001 RAL-321 1824 chr3L 14543621 14543658 chr3L 14543786 14543823 9 163 6.5 5.0 5.8 1.3 202 chr3L 14543621 intron CG9238 - chr3L 14543722 intron CG9238 - chr3L 14543823 intron CG9238 - chr3L_9_14540001 chr3L_14540001 RAL-321 1825 chr3L 14546590 14546818 chr3L 14546691 14546919 34 100 0.0 7.0 3.5 7.6 329 chr3L 14546590 intron CG9238 - chr3L 14546754 intron CG9238 - chr3L 14546919 intron CG9238 - chr3L_34_14545001 chr3L_14545001 RAL-321 1826 chr3L 14549547 14549594 chr3L 14549656 14549708 21 114 6.0 6.5 6.2 2.9 161 chr3L 14549547 intron CG9238 - chr3L 14549628 intron CG9238 - chr3L 14549708 intron CG9238 - chr3L_21_14545001 chr3L_14545001 RAL-321 1827 chr3L 14602959 14603081 chr3L 14603067 14603146 11 101 0.0 0.0 0.0 11.0 187 chr3L 14602959 intergenic not near genes chr3L 14603052 intergenic not near genes chr3L 14603146 intergenic not near genes chr3L_11_14600001 chr3L_14600001 RAL-321 1828 chr3L 14618391 14618422 chr3L 14618621 14618657 8 231 7.5 4.5 6.0 1.1 266 chr3L 14618391 intron shd + chr3L 14618524 intron shd + chr3L 14618657 intron shd + chr3L_8_14615001 chr3L_14615001 RAL-321 1829 chr3L 14635686 14635730 chr3L 14635784 14635829 13 98 4.5 5.5 5.0 2.2 143 chr3L 14635686 intron dlp + chr3L 14635758 intron dlp + chr3L 14635829 intron dlp + chr3L_13_14635001 chr3L_14635001 RAL-321 1830 chr3L 14702004 14702020 chr3L 14702103 14702119 6 99 0.0 9.5 4.8 1.0 115 chr3L 14702004 intron ome + chr3L 14702062 intron ome + chr3L 14702119 intron ome + chr3L_6_14700001 chr3L_14700001 RAL-321 1831 chr3L 14719775 14719811 chr3L 14719863 14719874 6 90 3.5 2.0 2.8 1.6 99 chr3L 14719775 intron ome + chr3L 14719824 intron ome + chr3L 14719874 intron ome + chr3L_6_14715001 chr3L_14715001 RAL-321 1832 chr3L 14721170 14721206 chr3L 14723033 14723069 Rt1c 14 1857 5.0 6.5 5.8 2.1 1899 chr3L 14721170 intron ome + chr3L 14722120 intron ome + chr3L 14723069 intron ome + chr3L_14_14720001 chr3L_14720001 RAL-321 1833 chr3L 14725593 14725613 chr3L 14728607 14728625 Doc 6 3014 10.0 14.5 12.2 0.5 3032 chr3L 14725593 intron ome + chr3L 14727109 intron ome + chr3L 14728625 intron ome + chr3L_6_14725001 chr3L_14725001 RAL-321 1834 chr3L 14825141 14825158 chr3L 14832888 14832905 Stalker2 7 7746 1.0 4.0 2.5 2.0 7764 chr3L 14825141 intron CG17839 + chr3L 14829023 intron CG17839 + chr3L 14832905 intron CG17839 + chr3L_7_14825001 chr3L_14825001 RAL-321 1835 chr3L 14839032 14839050 chr3L 14839141 14839159 5 109 6.0 10.5 8.2 0.5 127 chr3L 14839032 intron CG17839 + chr3L 14839096 intron CG17839 + chr3L 14839159 intron CG17839 + chr3L_5_14835001 chr3L_14835001 RAL-321 1836 chr3L 14861783 14861836 chr3L 14861883 14861936 16 97 7.0 4.5 5.8 2.4 153 chr3L 14861783 intron CG17839 + chr3L 14861860 intron CG17839 + chr3L 14861936 intron CG17839 + chr3L_16_14860001 chr3L_14860001 RAL-321 1837 chr3L 14866811 14866836 chr3L 14866917 14866947 14 111 2.0 3.5 2.8 3.7 136 chr3L 14866811 exon CG17839 + chr3L 14866879 intron CG17839 + chr3L 14866947 intron CG17839 + chr3L_14_14865001 chr3L_14865001 RAL-321 1838 chr3L 14913888 14913895 chr3L 14913985 14913992 4 97 9.0 5.0 7.0 0.5 104 chr3L 14913888 intron DCX-EMAP + chr3L 14913940 intron DCX-EMAP + chr3L 14913992 intron DCX-EMAP + chr3L_4_14910001 chr3L_14910001 RAL-321 1839 chr3L 14913896 14914157 chr3L 14913981 14914270 25 102 7.5 4.5 6.0 3.6 374 chr3L 14913896 intron DCX-EMAP + chr3L 14914083 intron DCX-EMAP + chr3L 14914270 intron DCX-EMAP + chr3L_25_14910001 chr3L_14910001 RAL-321 1840 chr3L 14917645 14917692 chr3L 14917743 14917775 14 101 5.0 8.5 6.8 1.8 130 chr3L 14917645 intron DCX-EMAP + chr3L 14917710 intron DCX-EMAP + chr3L 14917775 intron DCX-EMAP + chr3L_14_14915001 chr3L_14915001 RAL-321 1841 chr3L 14922086 14922134 chr3L 14922214 14922262 10 123 5.5 9.5 7.5 1.2 176 chr3L 14922086 intron DCX-EMAP + chr3L 14922174 intron DCX-EMAP + chr3L 14922262 intron DCX-EMAP + chr3L_10_14920001 chr3L_14920001 RAL-321 1842 chr3L 14933426 14933461 chr3L 14933528 14933563 10 100 5.0 8.0 6.5 1.3 137 chr3L 14933426 intron DCX-EMAP + chr3L 14933494 intron DCX-EMAP + chr3L 14933563 intron DCX-EMAP + chr3L_10_14930001 chr3L_14930001 RAL-321 1843 chr3L 14959975 14960016 chr3L 14960079 14960120 15 104 6.0 6.5 6.2 2.1 145 chr3L 14959975 intergenic not near genes chr3L 14960048 intergenic not near genes chr3L 14960120 intergenic not near genes chr3L_15_14960001 chr3L_14960001 RAL-321 1844 chr3L 14970741 14970765 chr3L 14971071 14971095 F-element 9 330 6.5 5.5 6.0 1.3 354 chr3L 14970741 intergenic Tom + chr3L 14970918 intergenic not near genes chr3L 14971095 intergenic not near genes chr3L_9_14970001 chr3L_14970001 RAL-321 1845 chr3L 15035143 15035181 chr3L 15038023 15038061 27 2879 7.0 6.5 6.8 3.5 2918 chr3L 15035143 intron Sytbeta - chr3L 15036602 intron Sytbeta - chr3L 15038061 intron Sytbeta - chr3L_27_15035001 chr3L_15035001 RAL-321 1846 chr3L 15085029 15085081 chr3L 15086215 15086267 1360 24 1184 5.0 3.0 4.0 4.8 1238 chr3L 15085029 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086267 intron cp309 - chr3L_24_15085001 chr3L_15085001 RAL-321 1847 chr3L 15094952 15094962 chr3L 15095068 15095078 4 116 13.5 11.5 12.5 0.3 126 chr3L 15094952 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095015 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095078 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_4_15095001 chr3L_15095001 RAL-321 1848 chr3L 15184921 15184979 chr3L 15185032 15185104 16 118 5.0 0.0 2.5 4.6 183 chr3L 15184921 intergenic not near genes chr3L 15185012 intergenic not near genes chr3L 15185104 intergenic not near genes chr3L_16_15185001 chr3L_15185001 RAL-321 1849 chr3L 15209047 15209099 chr3L 15209153 15209193 26 105 3.5 9.5 6.5 3.5 146 chr3L 15209047 intergenic CG6888 + chr3L 15209120 intergenic not near genes chr3L 15209193 intergenic not near genes chr3L_26_15205001 chr3L_15205001 RAL-321 1850 chr3L 15257412 15257447 chr3L 15257645 15257680 11 233 4.5 4.5 4.5 2.0 268 chr3L 15257412 intergenic not near genes chr3L 15257546 intergenic not near genes chr3L 15257680 intergenic not near genes chr3L_11_15255001 chr3L_15255001 RAL-321 1851 chr3L 15273339 15273360 chr3L 15273505 15273526 9 166 2.0 6.5 4.2 1.7 187 chr3L 15273339 intergenic not near genes chr3L 15273432 intergenic not near genes chr3L 15273526 intergenic not near genes chr3L_9_15270001 chr3L_15270001 RAL-321 1852 chr3L 15286505 15286555 chr3L 15286661 15286668 15 148 6.5 0.0 3.2 3.6 163 chr3L 15286505 intergenic not near genes chr3L 15286586 intergenic not near genes chr3L 15286668 intergenic not near genes chr3L_15_15285001 chr3L_15285001 RAL-321 1853 chr3L 15288054 15288105 chr3L 15289291 15289332 12 1233 43.5 55.5 49.5 0.2 1278 chr3L 15288054 intergenic not near genes chr3L 15288693 intergenic not near genes chr3L 15289332 intergenic not near genes chr3L_12_15285001 chr3L_15285001 RAL-321 1854 chr3L 15295756 15295801 chr3L 15298619 15298664 gypsy5 20 2862 6.5 7.5 7.0 2.5 2908 chr3L 15295756 intergenic not near genes chr3L 15297210 intergenic not near genes chr3L 15298664 intergenic Best4 + chr3L_20_15295001 chr3L_15295001 RAL-321 1855 chr3L 15333123 15333169 chr3L 15333223 15333235 16 98 3.5 3.0 3.2 3.8 112 chr3L 15333123 intergenic CR43247 + chr3L 15333179 intergenic CR43247 + chr3L 15333235 intergenic CR43247 + chr3L_16_15330001 chr3L_15330001 RAL-321 1856 chr3L 15384939 15384990 chr3L 15385087 15385138 19 147 4.0 3.5 3.8 4.0 199 chr3L 15384939 intergenic not near genes chr3L 15385038 intergenic not near genes chr3L 15385138 intergenic not near genes chr3L_19_15385001 chr3L_15385001 RAL-321 1857 chr3L 15393651 15393691 chr3L 15393873 15393913 18 222 4.0 5.0 4.5 3.3 262 chr3L 15393651 intergenic not near genes chr3L 15393782 intergenic not near genes chr3L 15393913 intergenic not near genes chr3L_18_15390001 chr3L_15390001 RAL-321 1858 chr3L 15399816 15399867 chr3L 15399987 15400036 24 169 8.0 7.0 7.5 2.8 220 chr3L 15399816 intergenic not near genes chr3L 15399926 intergenic not near genes chr3L 15400036 intergenic not near genes chr3L_24_15395001 chr3L_15395001 RAL-321 1859 chr3L 15406001 15406054 chr3L 15406103 15406147 10 101 5.5 5.0 5.2 1.6 146 chr3L 15406001 intergenic not near genes chr3L 15406074 intergenic not near genes chr3L 15406147 intergenic not near genes chr3L_10_15405001 chr3L_15405001 RAL-321 1860 chr3L 15423740 15423783 chr3L 15426604 15426647 opus 20 2864 8.0 2.5 5.2 3.2 2907 chr3L 15423740 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426647 intergenic not near genes chr3L_20_15425001 chr3L_15425001 RAL-321 1861 chr3L 15444641 15444684 chr3L 15444743 15444798 18 108 7.0 4.0 5.5 2.8 157 chr3L 15444641 intergenic not near genes chr3L 15444720 intergenic not near genes chr3L 15444798 intergenic not near genes chr3L_18_15440001 chr3L_15440001 RAL-321 1862 chr3L 15463446 15463491 chr3L 15463556 15463601 18 108 6.5 8.5 7.5 2.1 155 chr3L 15463446 intergenic not near genes chr3L 15463524 intergenic not near genes chr3L 15463601 intergenic not near genes chr3L_18_15460001 chr3L_15460001 RAL-321 1863 chr3L 15466021 15466126 chr3L 15466123 15466242 8 107 0.0 0.0 0.0 8.0 221 chr3L 15466021 intergenic not near genes chr3L 15466132 intergenic not near genes chr3L 15466242 intergenic not near genes chr3L_8_15465001 chr3L_15465001 RAL-321 1864 chr3L 15474678 15474686 chr3L 15474831 15474845 6 158 3.0 13.0 8.0 0.7 167 chr3L 15474678 intergenic not near genes chr3L 15474762 intergenic not near genes chr3L 15474845 intergenic not near genes chr3L_6_15470001 chr3L_15470001 RAL-321 1865 chr3L 15486019 15486059 chr3L 15486130 15486170 15 111 5.0 0.5 2.8 3.9 151 chr3L 15486019 intergenic not near genes chr3L 15486094 intergenic not near genes chr3L 15486170 intergenic not near genes chr3L_15_15485001 chr3L_15485001 RAL-321 1866 chr3L 15600149 15600197 chr3L 15600254 15600318 10 119 3.5 0.0 1.8 3.6 169 chr3L 15600149 intron RhoGAP71E + chr3L 15600234 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_10_15600001 chr3L_15600001 RAL-321 1867 chr3L 15641790 15641794 chr3L 15641895 15641899 6 105 0.0 8.5 4.2 1.2 109 chr3L 15641790 intron comm3 - chr3L 15641844 intron comm3 - chr3L 15641899 intron comm3 - chr3L_6_15640001 chr3L_15640001 RAL-321 1868 chr3L 15679151 15679204 chr3L 15679503 15679556 24 351 3.0 6.5 4.8 4.1 405 chr3L 15679151 intergenic not near genes chr3L 15679354 intergenic CG7304 + chr3L 15679556 intergenic CG7304 + chr3L_24_15675001 chr3L_15675001 RAL-321 1869 chr3L 15737374 15737401 chr3L 15737484 15737511 7 110 4.0 9.0 6.5 0.9 137 chr3L 15737374 intergenic not near genes chr3L 15737442 intergenic not near genes chr3L 15737511 intergenic not near genes chr3L_7_15735001 chr3L_15735001 RAL-321 1870 chr3L 15746057 15746092 chr3L 15746138 15746188 10 94 5.0 5.5 5.2 1.6 131 chr3L 15746057 intergenic not near genes chr3L 15746122 intergenic not near genes chr3L 15746188 intergenic not near genes chr3L_10_15745001 chr3L_15745001 RAL-321 1871 chr3L 15754359 15754397 chr3L 15754474 15754512 15 115 8.5 3.0 5.8 2.2 153 chr3L 15754359 intergenic not near genes chr3L 15754436 intergenic not near genes chr3L 15754512 intergenic not near genes chr3L_15_15750001 chr3L_15750001 RAL-321 1872 chr3L 15756860 15756912 chr3L 15756963 15757000 15 99 3.5 1.5 2.5 4.3 140 chr3L 15756860 intergenic not near genes chr3L 15756930 intergenic not near genes chr3L 15757000 intergenic not near genes chr3L_15_15755001 chr3L_15755001 RAL-321 1873 chr3L 15781633 15781669 chr3L 15781786 15781838 6 161 9.5 0.0 4.8 1.0 205 chr3L 15781633 intergenic not near genes chr3L 15781736 intergenic not near genes chr3L 15781838 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-321 1874 chr3L 15843042 15843063 chr3L 15843204 15843226 6 162 0.5 5.5 3.0 1.5 184 chr3L 15843042 intron CG32150 - chr3L 15843134 intron CG32150 - chr3L 15843226 intron CG32150 - chr3L_6_15840001 chr3L_15840001 RAL-321 1875 chr3L 15871597 15871608 chr3L 15871701 15871712 7 104 7.0 1.0 4.0 1.4 115 chr3L 15871597 intron pHCl - chr3L 15871654 intron pHCl - chr3L 15871712 intron pHCl - chr3L_7_15870001 chr3L_15870001 RAL-321 1876 chr3L 15883175 15883221 chr3L 15883488 15883534 21 310 7.5 7.5 7.5 2.5 359 chr3L 15883175 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883534 intron pHCl - chr3L_21_15880001 chr3L_15880001 RAL-321 1877 chr3L 15899236 15899254 chr3L 15899793 15899816 jockey 5 562 3.0 10.5 6.8 0.6 580 chr3L 15899236 intergenic pHCl - chr3L 15899526 intergenic pHCl - chr3L 15899816 intergenic sff - chr3L_5_15895001 chr3L_15895001 RAL-321 1878 chr3L 15929220 15929223 chr3L 15938387 15938390 roo 4 9167 0.5 19.5 10.0 0.4 9170 chr3L 15929220 intron Pka-C3 - chr3L 15933805 intron Pka-C3 - chr3L 15938390 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 RAL-321 1879 chr3L 15989216 15989225 chr3L 15989319 15989328 5 103 5.0 3.0 4.0 1.0 112 chr3L 15989216 intron Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989328 intron Hip14 + chr3L_5_15985001 chr3L_15985001 RAL-321 1880 chr3L 16060462 16060511 chr3L 16060621 16060670 19 158 6.5 12.0 9.2 1.9 208 chr3L 16060462 intron Mbs + chr3L 16060566 intron Mbs + chr3L 16060670 intron Mbs + chr3L_19_16060001 chr3L_16060001 RAL-321 1881 chr3L 16158803 16158832 chr3L 16158908 16158937 12 103 2.5 13.0 7.8 1.4 134 chr3L 16158803 intron CG5151 - chr3L 16158870 intron CG5151 - chr3L 16158937 intron CG5151 - chr3L_12_16155001 chr3L_16155001 RAL-321 1882 chr3L 16184068 16184120 chr3L 16188932 16188948 X-element 23 4858 5.5 6.0 5.8 3.4 4880 chr3L 16184068 intergenic not near genes chr3L 16186508 intergenic not near genes chr3L 16188948 intergenic not near genes chr3L_23_16185001 chr3L_16185001 RAL-321 1883 chr3L 16212789 16212840 chr3L 16212900 16212951 27 110 8.0 2.0 5.0 4.5 162 chr3L 16212789 intergenic CG13073 - chr3L 16212870 intergenic CG13073 - chr3L 16212951 intergenic CG13073 - chr3L_27_16210001 chr3L_16210001 RAL-321 1884 chr3L 16239917 16239943 chr3L 16240013 16240039 10 96 5.5 5.0 5.2 1.6 122 chr3L 16239917 intergenic l(3)72Dr + chr3L 16239978 intergenic not near genes chr3L 16240039 intergenic not near genes chr3L_10_16235001 chr3L_16235001 RAL-321 1885 chr3L 16243649 16243676 chr3L 16243760 16243787 12 111 0.0 6.5 3.2 2.9 138 chr3L 16243649 intergenic not near genes chr3L 16243718 intergenic not near genes chr3L 16243787 intergenic not near genes chr3L_12_16240001 chr3L_16240001 RAL-321 1886 chr3L 16258381 16258420 chr3L 16258476 16258481 15 94 6.0 8.0 7.0 1.9 100 chr3L 16258381 intergenic not near genes chr3L 16258431 intergenic not near genes chr3L 16258481 intergenic not near genes chr3L_15_16255001 chr3L_16255001 RAL-321 1887 chr3L 16279067 16279105 chr3L 16279168 16279206 18 101 3.0 6.5 4.8 3.1 139 chr3L 16279067 exon CG13050 - chr3L 16279136 intron CG13050 - chr3L 16279206 exon CG13050 - chr3L_18_16275001 chr3L_16275001 RAL-321 1888 chr3L 16312697 16312699 chr3L 16312827 16312829 4 130 8.5 0.0 4.2 0.8 132 chr3L 16312697 intergenic not near genes chr3L 16312763 intergenic not near genes chr3L 16312829 intergenic not near genes chr3L_4_16310001 chr3L_16310001 RAL-321 1889 chr3L 16431809 16431861 chr3L 16431923 16431975 17 114 5.0 0.5 2.8 4.5 166 chr3L 16431809 intron,intron CG33158 +,dsx-c73A - chr3L 16431892 intron,intron CG33158 +,dsx-c73A - chr3L 16431975 intron,intron CG33158 +,dsx-c73A - chr3L_17_16430001 chr3L_16430001 RAL-321 1890 chr3L 16437055 16437104 chr3L 16437149 16437210 15 105 1.0 0.0 0.5 10.0 155 chr3L 16437055 intron,intron CG33158 +,dsx-c73A - chr3L 16437132 intron,intron CG33158 +,dsx-c73A - chr3L 16437210 intron,intron CG33158 +,dsx-c73A - chr3L_15_16435001 chr3L_16435001 RAL-321 1891 chr3L 16443827 16443872 chr3L 16446187 16446227 Doc 26 2359 5.0 6.5 5.8 3.8 2400 chr3L 16443827 intron,intron CG33158 +,dsx-c73A - chr3L 16445027 intron,intron CG33158 +,dsx-c73A - chr3L 16446227 intron,intron CG33158 +,dsx-c73A - chr3L_26_16445001 chr3L_16445001 RAL-321 1892 chr3L 16446471 16446484 chr3L 16446595 16446602 10 123 8.5 15.5 12.0 0.8 131 chr3L 16446471 intron,intron CG33158 +,dsx-c73A - chr3L 16446536 intron,intron CG33158 +,dsx-c73A - chr3L 16446602 intron,intron CG33158 +,dsx-c73A - chr3L_10_16445001 chr3L_16445001 RAL-321 1893 chr3L 16457508 16457540 chr3L 16457624 16457655 10 114 5.5 4.5 5.0 1.7 147 chr3L 16457508 intron CG33158 + chr3L 16457582 intron CG33158 + chr3L 16457655 intron CG33158 + chr3L_10_16455001 chr3L_16455001 RAL-321 1894 chr3L 16458253 16458288 chr3L 16458386 16458421 13 132 8.0 7.0 7.5 1.5 168 chr3L 16458253 intron CG33158 + chr3L 16458337 intron CG33158 + chr3L 16458421 intron CG33158 + chr3L_13_16455001 chr3L_16455001 RAL-321 1895 chr3L 16458746 16458772 chr3L 16458845 16458871 9 96 11.0 12.0 11.5 0.7 125 chr3L 16458746 intron CG33158 + chr3L 16458808 intron CG33158 + chr3L 16458871 intron CG33158 + chr3L_9_16455001 chr3L_16455001 RAL-321 1896 chr3L 16493961 16493969 chr3L 16494498 16494506 jockey 5 537 12.5 5.5 9.0 0.5 545 chr3L 16493961 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494234 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494506 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_5_16490001 chr3L_16490001 RAL-321 1897 chr3L 16493971 16494012 chr3L 16494497 16494503 jockey 20 530 5.0 5.5 5.2 3.2 532 chr3L 16493971 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494237 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494503 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_20_16490001 chr3L_16490001 RAL-321 1898 chr3L 16496705 16496758 chr3L 16496825 16496899 5 137 2.0 0.0 1.0 2.5 194 chr3L 16496705 intron CG43373 - chr3L 16496802 intron CG43373 - chr3L 16496899 intron CG43373 - chr3L_5_16495001 chr3L_16495001 RAL-321 1899 chr3L 16532878 16532911 chr3L 16532975 16532993 12 96 13.5 11.0 12.2 0.9 115 chr3L 16532878 intron CG43373 - chr3L 16532936 intron CG43373 - chr3L 16532993 intron CG43373 - chr3L_12_16530001 chr3L_16530001 RAL-321 1900 chr3L 16539912 16539926 chr3L 16540043 16540057 6 131 0.0 7.0 3.5 1.3 145 chr3L 16539912 intron CG43373 - chr3L 16539984 intron CG43373 - chr3L 16540057 intron CG43373 - chr3L_6_16535001 chr3L_16535001 RAL-321 1901 chr3L 16542914 16542958 chr3L 16543033 16543077 30 118 7.0 8.0 7.5 3.5 163 chr3L 16542914 intron CG43373 - chr3L 16542996 intron CG43373 - chr3L 16543077 intron CG43373 - chr3L_30_16540001 chr3L_16540001 RAL-321 1902 chr3L 16610667 16610717 chr3L 16610772 16610821 20 105 3.0 8.0 5.5 3.1 154 chr3L 16610667 3` UTR Su(P) - chr3L 16610744 exon Su(P) - chr3L 16610821 exon Su(P) - chr3L_20_16610001 chr3L_16610001 RAL-321 1903 chr3L 16616491 16616542 chr3L 16621839 16621874 297 12 5346 6.5 4.5 5.5 1.8 5383 chr3L 16616491 3` UTR Abl - chr3L 16619182 3` UTR Abl - chr3L 16621874 3` UTR Abl - chr3L_12_16615001 chr3L_16615001 RAL-321 1904 chr3L 16642819 16642828 chr3L 16642888 16642892 4 76 4.5 4.0 4.2 0.8 73 chr3L 16642819 intron Abl - chr3L 16642856 intron Abl - chr3L 16642892 intron Abl - chr3L_4_16640001 chr3L_16640001 RAL-321 1905 chr3L 16652662 16652715 chr3L 16652761 16652814 27 98 8.0 5.5 6.8 3.5 152 chr3L 16652662 intron Baldspot - chr3L 16652738 intron Baldspot - chr3L 16652814 intron Baldspot - chr3L_27_16650001 chr3L_16650001 RAL-321 1906 chr3L 16680278 16680315 chr3L 16680763 16680800 20 485 9.5 4.5 7.0 2.5 522 chr3L 16680278 intron,intron Lasp -,CG43954 - chr3L 16680539 intron,intron Lasp -,CG43954 - chr3L 16680800 intron,intron Lasp -,CG43954 - chr3L_20_16680001 chr3L_16680001 RAL-321 1907 chr3L 16684004 16684046 chr3L 16689245 16689287 copia 12 5241 8.5 6.5 7.5 1.4 5283 chr3L 16684004 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689287 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_12_16685001 chr3L_16685001 RAL-321 1908 chr3L 16698358 16698409 chr3L 16698475 16698517 14 110 6.0 6.5 6.2 1.9 159 chr3L 16698358 intron,intron Lasp -,CG43954 - chr3L 16698438 intron,intron Lasp -,CG43954 - chr3L 16698517 intron,intron Lasp -,CG43954 - chr3L_14_16695001 chr3L_16695001 RAL-321 1909 chr3L 16743928 16743976 chr3L 16744062 16744105 19 132 9.5 5.0 7.2 2.3 177 chr3L 16743928 intergenic not near genes chr3L 16744016 intergenic not near genes chr3L 16744105 intergenic not near genes chr3L_19_16740001 chr3L_16740001 RAL-321 1910 chr3L 16749185 16749233 chr3L 16749281 16749329 26 95 8.0 4.0 6.0 3.7 144 chr3L 16749185 intergenic not near genes chr3L 16749257 intergenic not near genes chr3L 16749329 intergenic not near genes chr3L_26_16745001 chr3L_16745001 RAL-321 1911 chr3L 16764556 16764611 chr3L 16764669 16764738 14 121 6.5 0.0 3.2 3.3 182 chr3L 16764556 intergenic not near genes chr3L 16764647 intergenic not near genes chr3L 16764738 intergenic not near genes chr3L_14_16760001 chr3L_16760001 RAL-321 1912 chr3L 16799256 16799284 chr3L 16799353 16799381 11 97 6.0 7.5 6.8 1.4 125 chr3L 16799256 intron CG9674 - chr3L 16799318 intron CG9674 - chr3L 16799381 intron CG9674 - chr3L_11_16795001 chr3L_16795001 RAL-321 1913 chr3L 16815832 16815891 chr3L 16815938 16815994 14 104 0.0 4.0 2.0 4.7 162 chr3L 16815832 intron,intron nudC +,CG13024 - chr3L 16815913 intron,intron nudC +,CG13024 - chr3L 16815994 intron,intron nudC +,CG13024 - chr3L_14_16815001 chr3L_16815001 RAL-321 1914 chr3L 16845006 16845041 chr3L 16845139 16845174 16 133 3.5 3.5 3.5 3.6 168 chr3L 16845006 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845174 intergenic CG9669 -,CG9715 + chr3L_16_16845001 chr3L_16845001 RAL-321 1915 chr3L 16866194 16866215 chr3L 16866305 16866326 10 111 7.5 2.5 5.0 1.7 132 chr3L 16866194 intron Lmpt + chr3L 16866260 intron Lmpt + chr3L 16866326 intron Lmpt + chr3L_10_16865001 chr3L_16865001 RAL-321 1916 chr3L 16866236 16866243 chr3L 16866346 16866353 5 110 3.5 12.5 8.0 0.6 117 chr3L 16866236 intron Lmpt + chr3L 16866294 intron Lmpt + chr3L 16866353 intron Lmpt + chr3L_5_16865001 chr3L_16865001 RAL-321 1917 chr3L 16873322 16873359 chr3L 16873447 16873451 18 123 7.5 8.0 7.8 2.0 129 chr3L 16873322 intron Lmpt + chr3L 16873386 intron Lmpt + chr3L 16873451 intron Lmpt + chr3L_18_16870001 chr3L_16870001 RAL-321 1918 chr3L 16875353 16875391 chr3L 16875519 16875557 7 166 0.0 7.5 3.8 1.5 204 chr3L 16875353 intron Lmpt + chr3L 16875455 intron Lmpt + chr3L 16875557 intron Lmpt + chr3L_7_16875001 chr3L_16875001 RAL-321 1919 chr3L 16922635 16922642 chr3L 16922849 16922856 5 214 3.0 9.0 6.0 0.7 221 chr3L 16922635 intergenic Lmpt + chr3L 16922746 intergenic Lmpt + chr3L 16922856 intergenic Lmpt +,CG13028 + chr3L_5_16920001 chr3L_16920001 RAL-321 1920 chr3L 16926193 16926247 chr3L 16927558 16927602 16 1360 0.5 4.0 2.2 5.0 1409 chr3L 16926193 intron CG13023 - chr3L 16926898 intron CG13023 - chr3L 16927602 intergenic CG13023 - chr3L_16_16925001 chr3L_16925001 RAL-321 1921 chr3L 16945712 16945723 chr3L 16954885 16954896 roo 7 9171 10.0 5.0 7.5 0.8 9184 chr3L 16945712 exon Obp73a + chr3L 16950304 intergenic not near genes chr3L 16954896 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-321 1922 chr3L 16945727 16945758 chr3L 16954884 16954914 roo 20 9164 5.5 5.0 5.2 3.2 9187 chr3L 16945727 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954914 5` UTR Nc73EF + chr3L_20_16950001 chr3L_16950001 RAL-321 1923 chr3L 17026769 17026817 chr3L 17026870 17026918 7 101 4.5 3.5 4.0 1.4 149 chr3L 17026769 exon Fit2 + chr3L 17026844 3` UTR Fit2 + chr3L 17026918 3` UTR Fit2 + chr3L_7_17025001 chr3L_17025001 RAL-321 1924 chr3L 17027148 17027185 chr3L 17027260 17027297 17 112 2.5 3.5 3.0 4.2 149 chr3L 17027148 intergenic Fit2 +,CG7730 + chr3L 17027222 intergenic Fit2 +,CG7730 + chr3L 17027297 intergenic Fit2 +,CG7730 + chr3L_17_17025001 chr3L_17025001 RAL-321 1925 chr3L 17034915 17034953 chr3L 17035123 17035161 G2 14 208 4.5 6.0 5.2 2.3 246 chr3L 17034915 intergenic not near genes chr3L 17035038 intergenic not near genes chr3L 17035161 intergenic not near genes chr3L_14_17035001 chr3L_17035001 RAL-321 1926 chr3L 17084987 17085034 chr3L 17094156 17094203 roo 17 9169 8.0 10.0 9.0 1.7 9216 chr3L 17084987 intron Rbp6 - chr3L 17089595 intron Rbp6 - chr3L 17094203 intron Rbp6 - chr3L_17_17085001 chr3L_17085001 RAL-321 1927 chr3L 17113563 17113583 chr3L 17114103 17114153 11 558 4.0 4.0 4.0 2.2 590 chr3L 17113563 intron Rbp6 - chr3L 17113858 intron Rbp6 - chr3L 17114153 intron Rbp6 - chr3L_11_17110001 chr3L_17110001 RAL-321 1928 chr3L 17120635 17120685 chr3L 17120731 17120781 21 95 6.0 6.0 6.0 3.0 146 chr3L 17120635 intron Rbp6 - chr3L 17120708 intron Rbp6 - chr3L 17120781 intron Rbp6 - chr3L_21_17120001 chr3L_17120001 RAL-321 1929 chr3L 17132834 17132864 chr3L 17132937 17132955 7 103 2.5 3.5 3.0 1.8 121 chr3L 17132834 intron Rbp6 - chr3L 17132894 intron Rbp6 - chr3L 17132955 intron Rbp6 - chr3L_7_17130001 chr3L_17130001 RAL-321 1930 chr3L 17149145 17149164 chr3L 17149246 17149265 14 101 9.5 0.0 4.8 2.4 120 chr3L 17149145 intron Rbp6 - chr3L 17149205 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_14_17145001 chr3L_17145001 RAL-321 1931 chr3L 17272221 17272266 chr3L 17272374 17272419 13 153 1.0 7.5 4.2 2.5 198 chr3L 17272221 intergenic not near genes chr3L 17272320 intergenic not near genes chr3L 17272419 intergenic not near genes chr3L_13_17270001 chr3L_17270001 RAL-321 1932 chr3L 17329238 17329289 chr3L 17329338 17329389 26 100 7.5 9.0 8.2 2.8 151 chr3L 17329238 intergenic Or74a - chr3L 17329314 intergenic Or74a - chr3L 17329389 intergenic Or74a - chr3L_26_17325001 chr3L_17325001 RAL-321 1933 chr3L 17331046 17331097 chr3L 17331156 17331207 20 110 1.5 5.5 3.5 4.4 161 chr3L 17331046 intergenic not near genes chr3L 17331126 intergenic not near genes chr3L 17331207 intergenic not near genes chr3L_20_17330001 chr3L_17330001 RAL-321 1934 chr3L 17472206 17472209 chr3L 17472302 17472305 5 96 14.5 6.0 10.2 0.4 99 chr3L 17472206 intron CG7589 + chr3L 17472256 intron CG7589 + chr3L 17472305 intron CG7589 + chr3L_5_17470001 chr3L_17470001 RAL-321 1935 chr3L 17510725 17510765 chr3L 17510829 17510863 18 103 5.0 6.5 5.8 2.6 138 chr3L 17510725 exon Oatp74D + chr3L 17510794 intron Oatp74D + chr3L 17510863 intron Oatp74D + chr3L_18_17510001 chr3L_17510001 RAL-321 1936 chr3L 17516959 17517009 chr3L 17524537 17524587 412 16 7577 6.0 9.0 7.5 1.9 7628 chr3L 17516959 intron CG7564 + chr3L 17520773 intron CG7564 + chr3L 17524587 3` UTR CG7564 + chr3L_16_17520001 chr3L_17520001 RAL-321 1937 chr3L 17645284 17645336 chr3L 17645381 17645413 24 94 5.0 8.0 6.5 3.2 129 chr3L 17645284 intergenic CG43085 -,Pep - chr3L 17645348 intergenic CG43085 -,Pep - chr3L 17645413 intergenic CG43085 -,Pep - chr3L_24_17645001 chr3L_17645001 RAL-321 1938 chr3L 17672541 17672570 chr3L 17672637 17672646 14 91 10.5 10.0 10.2 1.2 105 chr3L 17672541 intron CG34251 + chr3L 17672594 intron CG34251 + chr3L 17672646 intron CG34251 + chr3L_14_17670001 chr3L_17670001 RAL-321 1939 chr3L 17672579 17672594 chr3L 17672635 17672640 5 58 5.5 9.0 7.2 0.6 61 chr3L 17672579 intron CG34251 + chr3L 17672610 intron CG34251 + chr3L 17672640 intron CG34251 + chr3L_5_17670001 chr3L_17670001 RAL-321 1940 chr3L 17678884 17678898 chr3L 17678988 17679002 8 104 6.5 0.5 3.5 1.8 118 chr3L 17678884 intron CG34251 + chr3L 17678943 intron CG34251 + chr3L 17679002 intron CG34251 + chr3L_8_17675001 chr3L_17675001 RAL-321 1941 chr3L 17730829 17730879 chr3L 17738179 17738229 mdg1 22 7350 7.5 7.0 7.2 2.7 7400 chr3L 17730829 intron Ccn + chr3L 17734529 intron Ccn + chr3L 17738229 intron Ccn + chr3L_22_17730001 chr3L_17730001 RAL-321 1942 chr3L 17789826 17789877 chr3L 17789922 17789973 28 96 5.0 5.5 5.2 4.5 147 chr3L 17789826 intergenic not near genes chr3L 17789900 intergenic not near genes chr3L 17789973 intergenic not near genes chr3L_28_17785001 chr3L_17785001 RAL-321 1943 chr3L 17790611 17790634 chr3L 17790896 17790919 7 285 6.5 9.5 8.0 0.8 308 chr3L 17790611 intergenic CG42815 - chr3L 17790765 intergenic CG42815 - chr3L 17790919 intergenic CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-321 1944 chr3L 17799797 17799842 chr3L 17801604 17801649 S-element 25 1807 9.0 11.0 10.0 2.3 1852 chr3L 17799797 intron NUCB1 - chr3L 17800723 intron NUCB1 - chr3L 17801649 intron NUCB1 - chr3L_25_17800001 chr3L_17800001 RAL-321 1945 chr3L 17834306 17834346 chr3L 17834490 17834530 17 184 0.0 6.5 3.2 4.0 224 chr3L 17834306 intron Grd + chr3L 17834418 intron Grd + chr3L 17834530 intron Grd + chr3L_17_17830001 chr3L_17830001 RAL-321 1946 chr3L 17836186 17836190 chr3L 17836284 17836288 4 98 3.5 20.0 11.8 0.3 102 chr3L 17836186 intron Grd + chr3L 17836237 intron Grd + chr3L 17836288 intron Grd + chr3L_4_17835001 chr3L_17835001 RAL-321 1947 chr3L 17918360 17918401 chr3L 17921174 17921224 opus 14 2821 5.5 6.5 6.0 2.0 2864 chr3L 17918360 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921224 intergenic not near genes chr3L_14_17915001 chr3L_17915001 RAL-321 1948 chr3L 17923580 17923589 chr3L 17923677 17923686 7 97 9.5 8.0 8.8 0.7 106 chr3L 17923580 intergenic not near genes chr3L 17923633 intergenic not near genes chr3L 17923686 intergenic not near genes chr3L_7_17920001 chr3L_17920001 RAL-321 1949 chr3L 18029938 18029969 chr3L 18030035 18030066 8 97 6.5 0.0 3.2 1.9 128 chr3L 18029938 intron Eip75B - chr3L 18030002 intron Eip75B - chr3L 18030066 intron Eip75B - chr3L_8_18030001 chr3L_18030001 RAL-321 1950 chr3L 18047689 18047735 chr3L 18056766 18056812 roo 25 9077 9.5 8.5 9.0 2.5 9123 chr3L 18047689 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056812 intron Eip75B - chr3L_25_18050001 chr3L_18050001 RAL-321 1951 chr3L 18057957 18058011 chr3L 18058077 18058132 14 119 5.0 4.5 4.8 2.4 175 chr3L 18057957 intron Eip75B - chr3L 18058044 intron Eip75B - chr3L 18058132 intron Eip75B - chr3L_14_18055001 chr3L_18055001 RAL-321 1952 chr3L 18064041 18064076 chr3L 18064147 18064181 21 104 2.5 3.0 2.8 5.5 140 chr3L 18064041 intron Eip75B - chr3L 18064111 intron Eip75B - chr3L 18064181 intron Eip75B - chr3L_21_18060001 chr3L_18060001 RAL-321 1953 chr3L 18066285 18066324 chr3L 18066454 18066493 15 168 5.5 2.0 3.8 3.1 208 chr3L 18066285 intergenic not near genes chr3L 18066389 intergenic not near genes chr3L 18066493 intergenic not near genes chr3L_15_18065001 chr3L_18065001 RAL-321 1954 chr3L 18066325 18066332 chr3L 18066453 18066502 5 154 5.0 2.0 3.5 1.1 177 chr3L 18066325 intergenic not near genes chr3L 18066414 intergenic not near genes chr3L 18066502 intergenic not near genes chr3L_5_18065001 chr3L_18065001 RAL-321 1955 chr3L 18073961 18073999 chr3L 18074082 18074120 21 121 11.5 9.0 10.2 1.9 159 chr3L 18073961 intergenic CG44004 - chr3L 18074040 intergenic CG44004 - chr3L 18074120 intergenic CG44004 - chr3L_21_18070001 chr3L_18070001 RAL-321 1956 chr3L 18081007 18081014 chr3L 18081109 18081116 6 102 4.5 5.0 4.8 1.0 109 chr3L 18081007 intergenic CR43253 - chr3L 18081062 intergenic CR43253 - chr3L 18081116 intergenic CR43253 - chr3L_6_18080001 chr3L_18080001 RAL-321 1957 chr3L 18106234 18106247 chr3L 18106373 18106386 5 139 10.5 0.5 5.5 0.8 152 chr3L 18106234 intergenic CG13698 -,mRpS26 + chr3L 18106310 intergenic CG13698 -,mRpS26 + chr3L 18106386 intergenic mRpS26 +,CG13698 - chr3L_5_18105001 chr3L_18105001 RAL-321 1958 chr3L 18106248 18106274 chr3L 18106371 18106413 11 137 5.0 0.5 2.8 2.9 165 chr3L 18106248 intergenic CG13698 -,mRpS26 + chr3L 18106330 intergenic CG13698 -,mRpS26 + chr3L 18106413 intergenic mRpS26 +,CG13698 - chr3L_11_18105001 chr3L_18105001 RAL-321 1959 chr3L 18107595 18107640 chr3L 18107708 18107753 31 112 5.5 4.0 4.8 5.3 158 chr3L 18107595 intergenic mRpS26 +,CG5147 - chr3L 18107674 intergenic CG5147 -,mRpS26 + chr3L 18107753 intergenic CG5147 -,mRpS26 + chr3L_31_18105001 chr3L_18105001 RAL-321 1960 chr3L 18122607 18122656 chr3L 18122704 18122753 25 97 7.5 9.0 8.2 2.7 146 chr3L 18122607 intergenic not near genes chr3L 18122680 intergenic not near genes chr3L 18122753 intergenic not near genes chr3L_25_18120001 chr3L_18120001 RAL-321 1961 chr3L 18133570 18133599 chr3L 18133671 18133700 4 101 5.0 3.0 4.0 0.8 130 chr3L 18133570 intergenic not near genes chr3L 18133635 intergenic not near genes chr3L 18133700 intergenic not near genes chr3L_4_18130001 chr3L_18130001 RAL-321 1962 chr3L 18136667 18136686 chr3L 18136765 18136784 5 98 0.0 5.5 2.8 1.3 117 chr3L 18136667 intergenic CR44669 - chr3L 18136726 intergenic CR44669 - chr3L 18136784 intergenic not near genes chr3L_5_18135001 chr3L_18135001 RAL-321 1963 chr3L 18150357 18150394 chr3L 18150459 18150497 11 102 3.5 7.0 5.2 1.8 140 chr3L 18150357 intron CG7330 + chr3L 18150427 intron CG7330 + chr3L 18150497 intron CG7330 + chr3L_11_18150001 chr3L_18150001 RAL-321 1964 chr3L 18160656 18160666 chr3L 18160758 18160768 5 102 12.0 5.5 8.8 0.5 112 chr3L 18160656 intron CG13699 - chr3L 18160712 intron CG13699 - chr3L 18160768 intron CG13699 - chr3L_5_18160001 chr3L_18160001 RAL-321 1965 chr3L 18172670 18172701 chr3L 18172766 18172797 27 96 6.5 8.5 7.5 3.2 127 chr3L 18172670 intron W - chr3L 18172734 intron W - chr3L 18172797 intron W - chr3L_27_18170001 chr3L_18170001 RAL-321 1966 chr3L 18175795 18175838 chr3L 18176054 18176097 20 259 7.0 4.0 5.5 3.1 302 chr3L 18175795 intron W - chr3L 18175946 intron W - chr3L 18176097 intron W - chr3L_20_18175001 chr3L_18175001 RAL-321 1967 chr3L 18186609 18186618 chr3L 18186768 18186777 4 159 11.0 5.0 8.0 0.4 168 chr3L 18186609 intergenic not near genes chr3L 18186693 intergenic not near genes chr3L 18186777 intergenic not near genes chr3L_4_18185001 chr3L_18185001 RAL-321 1968 chr3L 18189570 18189584 chr3L 18190191 18190205 S-element 7 620 17.5 10.0 13.8 0.5 635 chr3L 18189570 intergenic not near genes chr3L 18189888 intergenic not near genes chr3L 18190205 intergenic not near genes chr3L_7_18185001 chr3L_18185001 RAL-321 1969 chr3L 18203577 18203628 chr3L 18203692 18203731 12 109 6.5 0.0 3.2 2.9 154 chr3L 18203577 3` UTR CG7320 + chr3L 18203654 intergenic CG7320 + chr3L 18203731 intergenic CG7320 + chr3L_12_18200001 chr3L_18200001 RAL-321 1970 chr3L 18210721 18210750 chr3L 18210817 18210846 16 96 8.0 7.5 7.8 1.8 125 chr3L 18210721 intergenic not near genes chr3L 18210784 intergenic not near genes chr3L 18210846 intergenic not near genes chr3L_16_18210001 chr3L_18210001 RAL-321 1971 chr3L 18221083 18221132 chr3L 18221184 18221237 13 100 0.0 0.5 0.2 10.8 154 chr3L 18221083 intergenic not near genes chr3L 18221160 intergenic not near genes chr3L 18221237 intergenic not near genes chr3L_13_18220001 chr3L_18220001 RAL-321 1972 chr3L 18223146 18223187 chr3L 18223249 18223302 13 109 5.0 0.0 2.5 3.7 156 chr3L 18223146 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223302 intergenic not near genes chr3L_13_18220001 chr3L_18220001 RAL-321 1973 chr3L 18240123 18240142 chr3L 18240246 18240265 10 123 6.0 0.0 3.0 2.5 142 chr3L 18240123 intergenic not near genes chr3L 18240194 intergenic not near genes chr3L 18240265 intergenic not near genes chr3L_10_18240001 chr3L_18240001 RAL-321 1974 chr3L 18248936 18248984 chr3L 18249054 18249102 16 118 5.5 6.5 6.0 2.3 166 chr3L 18248936 intergenic not near genes chr3L 18249019 intergenic not near genes chr3L 18249102 intergenic not near genes chr3L_16_18245001 chr3L_18245001 RAL-321 1975 chr3L 18262450 18262483 chr3L 18262553 18262586 17 103 7.5 3.0 5.2 2.7 136 chr3L 18262450 intergenic not near genes chr3L 18262518 intergenic not near genes chr3L 18262586 intergenic not near genes chr3L_17_18260001 chr3L_18260001 RAL-321 1976 chr3L 18276070 18276103 chr3L 18276185 18276218 12 115 6.0 6.0 6.0 1.7 148 chr3L 18276070 intergenic not near genes chr3L 18276144 intergenic not near genes chr3L 18276218 intergenic not near genes chr3L_12_18275001 chr3L_18275001 RAL-321 1977 chr3L 18301331 18301378 chr3L 18301439 18301487 24 109 1.5 7.5 4.5 4.4 156 chr3L 18301331 intergenic CG13700 - chr3L 18301409 intergenic CG13700 - chr3L 18301487 intergenic CG13700 - chr3L_24_18300001 chr3L_18300001 RAL-321 1978 chr3L 18307286 18307301 chr3L 18307393 18307408 6 107 7.0 0.0 3.5 1.3 122 chr3L 18307286 intergenic not near genes chr3L 18307347 intergenic not near genes chr3L 18307408 intergenic not near genes chr3L_6_18305001 chr3L_18305001 RAL-321 1979 chr3L 18337685 18337721 chr3L 18337782 18337818 12 97 4.5 9.5 7.0 1.5 133 chr3L 18337685 intergenic not near genes chr3L 18337752 intergenic not near genes chr3L 18337818 intergenic not near genes chr3L_12_18335001 chr3L_18335001 RAL-321 1980 chr3L 18359580 18359627 chr3L 18359692 18359739 17 112 3.0 7.0 5.0 2.8 159 chr3L 18359580 intergenic not near genes chr3L 18359660 intergenic not near genes chr3L 18359739 intergenic not near genes chr3L_17_18355001 chr3L_18355001 RAL-321 1981 chr3L 18436043 18436089 chr3L 18436161 18436207 20 117 6.5 7.0 6.8 2.6 164 chr3L 18436043 intergenic not near genes chr3L 18436125 intergenic not near genes chr3L 18436207 intergenic not near genes chr3L_20_18435001 chr3L_18435001 RAL-321 1982 chr3L 18448598 18448620 chr3L 18448710 18448732 10 112 11.0 7.5 9.2 1.0 134 chr3L 18448598 intergenic not near genes chr3L 18448665 intergenic not near genes chr3L 18448732 intergenic not near genes chr3L_10_18445001 chr3L_18445001 RAL-321 1983 chr3L 18456253 18456302 chr3L 18456361 18456410 17 108 5.5 4.5 5.0 2.8 157 chr3L 18456253 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456410 3` UTR CR44670 - chr3L_17_18455001 chr3L_18455001 RAL-321 1984 chr3L 18501327 18501380 chr3L 18501460 18501513 23 132 4.5 6.5 5.5 3.5 186 chr3L 18501327 intron AstC-R2 - chr3L 18501420 intron AstC-R2 - chr3L 18501513 intron AstC-R2 - chr3L_23_18500001 chr3L_18500001 RAL-321 1985 chr3L 18506129 18506161 chr3L 18509594 18509644 F-element 16 3481 6.5 6.5 6.5 2.1 3515 chr3L 18506129 intergenic not near genes chr3L 18507886 intergenic not near genes chr3L 18509644 intergenic not near genes chr3L_16_18505001 chr3L_18505001 RAL-321 1986 chr3L 18528609 18528657 chr3L 18537790 18537838 roo 26 9181 5.0 6.0 5.5 4.0 9229 chr3L 18528609 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537838 intergenic not near genes chr3L_26_18530001 chr3L_18530001 RAL-321 1987 chr3L 18567008 18567048 chr3L 18567114 18567154 4 106 28.5 24.0 26.2 0.1 146 chr3L 18567008 intron AstC-R1 + chr3L 18567081 intron AstC-R1 + chr3L 18567154 intron AstC-R1 + chr3L_4_18565001 chr3L_18565001 RAL-321 1988 chr3L 18579545 18579600 chr3L 18579693 18579748 20 147 8.5 9.5 9.0 2.0 203 chr3L 18579545 intergenic not near genes chr3L 18579646 intergenic not near genes chr3L 18579748 intergenic not near genes chr3L_20_18575001 chr3L_18575001 RAL-321 1989 chr3L 18593929 18593972 chr3L 18595928 18595961 Doc 18 1999 7.5 2.5 5.0 3.0 2032 chr3L 18593929 intergenic term - chr3L 18594945 intergenic not near genes chr3L 18595961 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-321 1990 chr3L 18606731 18606773 chr3L 18606949 18606987 4 217 21.0 20.5 20.8 0.2 256 chr3L 18606731 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606859 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606987 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_4_18605001 chr3L_18605001 RAL-321 1991 chr3L 18638562 18638588 chr3L 18638676 18638702 8 111 13.0 6.5 9.8 0.7 140 chr3L 18638562 intron MYPT-75D + chr3L 18638632 intron MYPT-75D + chr3L 18638702 intron MYPT-75D + chr3L_8_18635001 chr3L_18635001 RAL-321 1992 chr3L 18638589 18638609 chr3L 18638673 18638723 9 101 8.0 6.5 7.2 1.1 134 chr3L 18638589 intron MYPT-75D + chr3L 18638656 intron MYPT-75D + chr3L 18638723 intron MYPT-75D + chr3L_9_18635001 chr3L_18635001 RAL-321 1993 chr3L 18701109 18701155 chr3L 18701217 18701263 33 107 8.0 5.5 6.8 4.2 154 chr3L 18701109 intergenic not near genes chr3L 18701186 intergenic not near genes chr3L 18701263 intergenic not near genes chr3L_33_18700001 chr3L_18700001 RAL-321 1994 chr3L 18710743 18710790 chr3L 18718715 18718762 Stalker2 26 7971 6.5 5.5 6.0 3.7 8019 chr3L 18710743 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_26_18710001 chr3L_18710001 RAL-321 1995 chr3L 18721765 18721803 chr3L 18721876 18721914 16 110 6.0 9.0 7.5 1.9 149 chr3L 18721765 intergenic CG12477 - chr3L 18721840 intergenic CG12477 - chr3L 18721914 3` UTR CG12477 - chr3L_16_18720001 chr3L_18720001 RAL-321 1996 chr3L 18725045 18725077 chr3L 18725681 18725713 13 636 6.5 6.5 6.5 1.7 668 chr3L 18725045 intergenic not near genes chr3L 18725379 intergenic not near genes chr3L 18725713 intergenic not near genes chr3L_13_18725001 chr3L_18725001 RAL-321 1997 chr3L 18736037 18736043 chr3L 18736152 18736158 7 115 11.0 10.0 10.5 0.6 121 chr3L 18736037 intergenic not near genes chr3L 18736098 intergenic not near genes chr3L 18736158 intergenic not near genes chr3L_7_18735001 chr3L_18735001 RAL-321 1998 chr3L 18736050 18736057 chr3L 18736151 18736172 6 111 9.0 9.5 9.2 0.6 122 chr3L 18736050 intergenic not near genes chr3L 18736111 intergenic not near genes chr3L 18736172 intergenic not near genes chr3L_6_18735001 chr3L_18735001 RAL-321 1999 chr3L 18744945 18744995 chr3L 18745070 18745122 4 126 26.5 26.5 26.5 0.1 177 chr3L 18744945 exon CG6885 + chr3L 18745034 exon CG6885 + chr3L 18745122 exon CG6885 + chr3L_4_18745001 chr3L_18745001 RAL-321 2000 chr3L 18753527 18753564 chr3L 18753629 18753666 9 102 6.5 6.0 6.2 1.2 139 chr3L 18753527 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753666 intron ftz-f1 - chr3L_9_18750001 chr3L_18750001 RAL-321 2001 chr3L 18765460 18765503 chr3L 18765593 18765636 17 132 9.5 8.5 9.0 1.7 176 chr3L 18765460 intron ftz-f1 - chr3L 18765548 intron ftz-f1 - chr3L 18765636 intron ftz-f1 - chr3L_17_18765001 chr3L_18765001 RAL-321 2002 chr3L 18772389 18772434 chr3L 18781090 18781135 roo 26 8701 6.0 5.0 5.5 4.0 8746 chr3L 18772389 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781135 intron ftz-f1 - chr3L_26_18775001 chr3L_18775001 RAL-321 2003 chr3L 18784373 18784406 chr3L 18784482 18784515 13 109 9.5 10.0 9.8 1.2 142 chr3L 18784373 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784515 intron ftz-f1 - chr3L_13_18780001 chr3L_18780001 RAL-321 2004 chr3L 18833784 18833804 chr3L 18834950 18834988 1360 7 1181 13.5 14.0 13.8 0.5 1204 chr3L 18833784 intron Indy - chr3L 18834386 intron Indy - chr3L 18834988 intron Indy - chr3L_7_18830001 chr3L_18830001 RAL-321 2005 chr3L 18843848 18843875 chr3L 18843966 18843993 18 117 9.0 5.5 7.2 2.2 145 chr3L 18843848 intron Indy - chr3L 18843920 intron Indy - chr3L 18843993 intron Indy - chr3L_18_18840001 chr3L_18840001 RAL-321 2006 chr3L 18924459 18924505 chr3L 18924555 18924601 12 96 4.0 6.5 5.2 1.9 142 chr3L 18924459 intron CG32204 - chr3L 18924530 intron CG32204 - chr3L 18924601 intron CG32204 - chr3L_12_18920001 chr3L_18920001 RAL-321 2007 chr3L 18929940 18929988 chr3L 18930041 18930092 13 101 3.0 7.0 5.0 2.2 152 chr3L 18929940 intron CG32204 - chr3L 18930016 intron CG32204 - chr3L 18930092 exon CG32204 - chr3L_13_18930001 chr3L_18930001 RAL-321 2008 chr3L 18933611 18933658 chr3L 18933725 18933771 20 113 12.0 14.0 13.0 1.4 160 chr3L 18933611 intron CG32204 - chr3L 18933691 intron CG32204 - chr3L 18933771 intron CG32204 - chr3L_20_18930001 chr3L_18930001 RAL-321 2009 chr3L 18969529 18969573 chr3L 18969625 18969666 21 93 7.5 8.0 7.8 2.4 137 chr3L 18969529 intergenic not near genes chr3L 18969598 intergenic not near genes chr3L 18969666 intergenic not near genes chr3L_21_18965001 chr3L_18965001 RAL-321 2010 chr3L 19008833 19008871 chr3L 19009190 19009229 jockey 10 354 5.0 7.5 6.2 1.4 396 chr3L 19008833 intron nkd - chr3L 19009031 intron nkd - chr3L 19009229 intron nkd - chr3L_10_19005001 chr3L_19005001 RAL-321 2011 chr3L 19019990 19020012 chr3L 19020126 19020148 7 136 16.0 12.0 14.0 0.5 158 chr3L 19019990 intron nkd - chr3L 19020069 intron nkd - chr3L 19020148 intron nkd - chr3L_7_19020001 chr3L_19020001 RAL-321 2012 chr3L 19029446 19029479 chr3L 19029552 19029601 6 112 11.0 6.5 8.8 0.6 155 chr3L 19029446 intron nkd - chr3L 19029524 intron nkd - chr3L 19029601 intron nkd - chr3L_6_19025001 chr3L_19025001 RAL-321 2013 chr3L 19082028 19082064 chr3L 19082139 19082172 24 119 7.5 9.0 8.2 2.6 144 chr3L 19082028 intron Mkp3 - chr3L 19082100 intron Mkp3 - chr3L 19082172 intron Mkp3 - chr3L_24_19080001 chr3L_19080001 RAL-321 2014 chr3L 19101696 19101739 chr3L 19102088 19102131 23 392 0.0 7.0 3.5 5.1 435 chr3L 19101696 intergenic not near genes chr3L 19101914 intergenic not near genes chr3L 19102131 intergenic not near genes chr3L_23_19100001 chr3L_19100001 RAL-321 2015 chr3L 19111347 19111369 chr3L 19111454 19111476 9 107 3.0 11.5 7.2 1.1 129 chr3L 19111347 intron CG14082 - chr3L 19111412 intron CG14082 - chr3L 19111476 intron CG14082 - chr3L_9_19110001 chr3L_19110001 RAL-321 2016 chr3L 19115643 19115653 chr3L 19115820 19115851 BS 6 189 16.0 7.5 11.8 0.5 208 chr3L 19115643 intron CG14082 - chr3L 19115747 intron CG14082 - chr3L 19115851 intron CG14082 - chr3L_6_19115001 chr3L_19115001 RAL-321 2017 chr3L 19115655 19115660 chr3L 19115818 19115818 BS 4 174 14.5 6.5 10.5 0.3 163 chr3L 19115655 intron CG14082 - chr3L 19115736 intron CG14082 - chr3L 19115818 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-321 2018 chr3L 19117025 19117074 chr3L 19124487 19124541 mdg1 21 7464 6.5 5.0 5.8 3.1 7516 chr3L 19117025 intron CG14082 - chr3L 19120783 intron CG14082 - chr3L 19124541 intron CG14082 - chr3L_21_19120001 chr3L_19120001 RAL-321 2019 chr3L 19138544 19138584 chr3L 19138639 19138685 19 98 6.0 12.5 9.2 1.9 141 chr3L 19138544 intron CG14082 - chr3L 19138614 intron CG14082 - chr3L 19138685 intron CG14082 - chr3L_19_19135001 chr3L_19135001 RAL-321 2020 chr3L 19182365 19182418 chr3L 19182466 19182519 21 101 5.0 3.5 4.2 4.0 154 chr3L 19182365 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182519 intron fz2 - chr3L_21_19180001 chr3L_19180001 RAL-321 2021 chr3L 19208040 19208092 chr3L 19209434 19209481 Doc 19 1392 6.5 5.5 6.0 2.7 1441 chr3L 19208040 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209481 intron fz2 - chr3L_19_19205001 chr3L_19205001 RAL-321 2022 chr3L 19210103 19210140 chr3L 19210219 19210256 11 116 15.0 21.5 18.2 0.6 153 chr3L 19210103 intron fz2 - chr3L 19210180 intron fz2 - chr3L 19210256 intron fz2 - chr3L_11_19210001 chr3L_19210001 RAL-321 2023 chr3L 19216496 19216516 chr3L 19216593 19216613 8 97 16.0 11.0 13.5 0.6 117 chr3L 19216496 intron fz2 - chr3L 19216554 intron fz2 - chr3L 19216613 intron fz2 - chr3L_8_19215001 chr3L_19215001 RAL-321 2024 chr3L 19220633 19220634 chr3L 22908066 22908066 5 3687433 34.5 37.5 36.0 0.1 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-321 2025 chr3L 19222368 19222396 chr3L 19222509 19222537 6 140 18.5 23.5 21.0 0.3 169 chr3L 19222368 intron fz2 - chr3L 19222452 intron fz2 - chr3L 19222537 intron fz2 - chr3L_6_19220001 chr3L_19220001 RAL-321 2026 chr3L 19238718 19238750 chr3L 19238837 19238877 11 126 16.0 16.0 16.0 0.6 159 chr3L 19238718 intergenic not near genes chr3L 19238798 intergenic not near genes chr3L 19238877 intergenic not near genes chr3L_11_19235001 chr3L_19235001 RAL-321 2027 chr3L 19244112 19244123 chr3L 19244193 19244221 5 91 10.5 17.0 13.8 0.3 109 chr3L 19244112 intergenic not near genes chr3L 19244166 intergenic not near genes chr3L 19244221 intergenic not near genes chr3L_5_19240001 chr3L_19240001 RAL-321 2028 chr3L 19265254 19265304 chr3L 19268493 19268543 6 3241 32.5 38.0 35.2 0.2 3289 chr3L 19265254 3` UTR,exon CG42374 +,CG9666 + chr3L 19266898 exon CG9629 - chr3L 19268543 intron CG9629 - chr3L_6_19265001 chr3L_19265001 RAL-321 2029 chr3L 19269808 19269832 chr3L 19270032 19270040 5 221 19.5 21.0 20.2 0.2 232 chr3L 19269808 intron,exon CG14085 +,CG14088 - chr3L 19269924 intron,exon CG14085 +,CG14088 - chr3L 19270040 intron,exon CG14085 +,CG14088 - chr3L_5_19265001 chr3L_19265001 RAL-321 2030 chr3L 19282244 19282294 chr3L 19282360 19282410 14 114 17.0 18.0 17.5 0.8 166 chr3L 19282244 3` UTR Gbs-76A - chr3L 19282327 3` UTR Gbs-76A - chr3L 19282410 3` UTR Gbs-76A - chr3L_14_19280001 chr3L_19280001 RAL-321 2031 chr3L 19342740 19342776 chr3L 19342851 19342887 12 111 5.0 6.0 5.5 1.8 147 chr3L 19342740 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342887 3` UTR CG32206 - chr3L_12_19340001 chr3L_19340001 RAL-321 2032 chr3L 19346870 19346884 chr3L 19346965 19346982 7 98 1.5 12.5 7.0 0.9 112 chr3L 19346870 intron CG32206 - chr3L 19346926 intron CG32206 - chr3L 19346982 intron CG32206 - chr3L_7_19345001 chr3L_19345001 RAL-321 2033 chr3L 19365918 19365929 chr3L 19366035 19366046 8 117 0.0 11.0 5.5 1.2 128 chr3L 19365918 intron CG32206 - chr3L 19365982 intron CG32206 - chr3L 19366046 intron CG32206 - chr3L_8_19365001 chr3L_19365001 RAL-321 2034 chr3L 19390710 19390732 chr3L 19390828 19390850 8 118 15.0 17.5 16.2 0.5 140 chr3L 19390710 intron CG32206 - chr3L 19390780 intron CG32206 - chr3L 19390850 intron CG32206 - chr3L_8_19390001 chr3L_19390001 RAL-321 2035 chr3L 19398918 19398932 chr3L 19403655 19403669 F-element 4 4736 3.0 3.0 3.0 1.0 4751 chr3L 19398918 intron CG32206 - chr3L 19401294 intron CG32206 - chr3L 19403669 intron CG32206 - chr3L_4_19400001 chr3L_19400001 RAL-321 2036 chr3L 19417784 19417833 chr3L 19417884 19417921 13 97 8.0 5.5 6.8 1.7 137 chr3L 19417784 intergenic not near genes chr3L 19417852 intergenic not near genes chr3L 19417921 intergenic not near genes chr3L_13_19415001 chr3L_19415001 RAL-321 2037 chr3L 19426736 19426756 chr3L 19426834 19426854 7 97 11.5 7.0 9.2 0.7 118 chr3L 19426736 intergenic not near genes chr3L 19426795 intergenic not near genes chr3L 19426854 intergenic not near genes chr3L_7_19425001 chr3L_19425001 RAL-321 2038 chr3L 19426758 19426780 chr3L 19426827 19426841 9 83 8.5 6.0 7.2 1.1 83 chr3L 19426758 intergenic not near genes chr3L 19426800 intergenic not near genes chr3L 19426841 intergenic not near genes chr3L_9_19425001 chr3L_19425001 RAL-321 2039 chr3L 19430376 19430430 chr3L 19430474 19430528 17 96 4.0 10.0 7.0 2.1 152 chr3L 19430376 intergenic not near genes chr3L 19430452 intergenic not near genes chr3L 19430528 intergenic not near genes chr3L_17_19430001 chr3L_19430001 RAL-321 2040 chr3L 19439161 19439205 chr3L 19439260 19439304 11 99 16.0 11.0 13.5 0.8 143 chr3L 19439161 intergenic not near genes chr3L 19439232 intergenic not near genes chr3L 19439304 intergenic not near genes chr3L_11_19435001 chr3L_19435001 RAL-321 2041 chr3L 19488477 19488503 chr3L 19488579 19488605 10 102 7.5 9.0 8.2 1.1 128 chr3L 19488477 intergenic pncr009:3L -,CG32212 + chr3L 19488541 intergenic pncr009:3L -,CG32212 + chr3L 19488605 intergenic pncr009:3L -,CG32212 + chr3L_10_19485001 chr3L_19485001 RAL-321 2042 chr3L 19554796 19554844 chr3L 19554911 19554958 9 114 18.0 16.0 17.0 0.5 162 chr3L 19554796 intergenic CG9300 + chr3L 19554877 intergenic CG9300 + chr3L 19554958 intergenic CG9300 + chr3L_9_19550001 chr3L_19550001 RAL-321 2043 chr3L 19641346 19641352 chr3L 19641463 19641469 4 117 22.5 6.5 14.5 0.3 123 chr3L 19641346 intron CG8786 - chr3L 19641408 intron CG8786 - chr3L 19641469 intron CG8786 - chr3L_4_19640001 chr3L_19640001 RAL-321 2044 chr3L 19641359 19641388 chr3L 19641460 19641505 14 116 14.0 5.5 9.8 1.3 146 chr3L 19641359 intron CG8786 - chr3L 19641432 intron CG8786 - chr3L 19641505 intron CG8786 - chr3L_14_19640001 chr3L_19640001 RAL-321 2045 chr3L 19642682 19642696 chr3L 19642747 19642792 6 86 17.5 15.5 16.5 0.3 110 chr3L 19642682 5` UTR CG8786 - chr3L 19642737 5` UTR CG8786 - chr3L 19642792 5` UTR CG8786 - chr3L_6_19640001 chr3L_19640001 RAL-321 2046 chr3L 19695406 19695425 chr3L 19695505 19695516 4 96 14.0 14.0 14.0 0.3 110 chr3L 19695406 intergenic verm - chr3L 19695461 intergenic verm - chr3L 19695516 intergenic verm - chr3L_4_19695001 chr3L_19695001 RAL-321 2047 chr3L 19820278 19820315 chr3L 19827847 19827884 412 12 7569 7.0 11.5 9.2 1.2 7606 chr3L 19820278 intron Deaf1 + chr3L 19824081 intron Deaf1 + chr3L 19827884 intron Deaf1 + chr3L_12_19820001 chr3L_19820001 RAL-321 2048 chr3L 19848484 19848530 chr3L 19857694 19857740 roo 18 9208 8.0 9.5 8.8 1.8 9256 chr3L 19848484 intron Papss + chr3L 19853112 intron Papss + chr3L 19857740 intron Papss + chr3L_18_19850001 chr3L_19850001 RAL-321 2049 chr3L 19861802 19861853 chr3L 19863610 19863661 S-element 21 1806 6.0 2.5 4.2 4.0 1859 chr3L 19861802 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863661 intergenic not near genes chr3L_21_19860001 chr3L_19860001 RAL-321 2050 chr3L 19899872 19899922 chr3L 19899989 19900039 14 117 20.0 19.5 19.8 0.7 167 chr3L 19899872 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899956 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900039 intron,intron Mi-2 -,Su(Tpl) - chr3L_14_19895001 chr3L_19895001 RAL-321 2051 chr3L 19905159 19905207 chr3L 19905508 19905518 19 347 16.0 16.0 16.0 1.1 359 chr3L 19905159 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905338 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905518 intron,intron Mi-2 -,Su(Tpl) - chr3L_19_19905001 chr3L_19905001 RAL-321 2052 chr3L 19933516 19933562 chr3L 19934358 19934404 21 841 8.5 5.5 7.0 2.6 888 chr3L 19933516 intergenic CR45678 + chr3L 19933960 5` UTR CR45678 + chr3L 19934404 intergenic CR45678 + chr3L_21_19930001 chr3L_19930001 RAL-321 2053 chr3L 19961261 19961286 chr3L 19961492 19961510 6 230 23.5 11.0 17.2 0.3 249 chr3L 19961261 intron Ac76E + chr3L 19961386 intron Ac76E + chr3L 19961510 intron Ac76E + chr3L_6_19960001 chr3L_19960001 RAL-321 2054 chr3L 19962948 19962979 chr3L 19963029 19963077 8 92 12.5 19.0 15.8 0.5 129 chr3L 19962948 intron Ac76E + chr3L 19963012 intron Ac76E + chr3L 19963077 intron Ac76E + chr3L_8_19960001 chr3L_19960001 RAL-321 2055 chr3L 19981189 19981235 chr3L 19981287 19981335 21 100 5.5 3.0 4.2 4.0 146 chr3L 19981189 intergenic CG17732 + chr3L 19981262 intergenic CG17732 + chr3L 19981335 intergenic CG17732 + chr3L_21_19980001 chr3L_19980001 RAL-321 2056 chr3L 19992084 19992117 chr3L 19992181 19992214 13 97 15.5 17.5 16.5 0.7 130 chr3L 19992084 intron,intron CG7646 +,Nca + chr3L 19992149 intron,intron CG7646 +,Nca + chr3L 19992214 intron,intron CG7646 +,Nca + chr3L_13_19990001 chr3L_19990001 RAL-321 2057 chr3L 20086767 20086809 chr3L 20086865 20086907 12 98 14.0 17.5 15.8 0.7 140 chr3L 20086767 intron sNPF-R - chr3L 20086837 intron sNPF-R - chr3L 20086907 intron sNPF-R - chr3L_12_20085001 chr3L_20085001 RAL-321 2058 chr3L 20096066 20096112 chr3L 20096190 20096231 7 119 5.5 0.0 2.8 1.8 165 chr3L 20096066 intergenic not near genes chr3L 20096148 intergenic not near genes chr3L 20096231 intergenic not near genes chr3L_7_20095001 chr3L_20095001 RAL-321 2059 chr3L 20113460 20113505 chr3L 20113575 20113620 27 115 6.5 5.5 6.0 3.9 160 chr3L 20113460 intergenic not near genes chr3L 20113540 intergenic not near genes chr3L 20113620 intergenic not near genes chr3L_27_20110001 chr3L_20110001 RAL-321 2060 chr3L 20113641 20113688 chr3L 20122918 20122965 roo 20 9277 3.5 6.0 4.8 3.4 9324 chr3L 20113641 intergenic not near genes chr3L 20118303 intergenic not near genes chr3L 20122965 intergenic not near genes chr3L_20_20115001 chr3L_20115001 RAL-321 2061 chr3L 20143059 20143111 chr3L 20143159 20143211 16 99 22.0 19.0 20.5 0.7 152 chr3L 20143059 intergenic not near genes chr3L 20143135 intergenic not near genes chr3L 20143211 intergenic not near genes chr3L_16_20140001 chr3L_20140001 RAL-321 2062 chr3L 20148267 20148317 chr3L 20148377 20148427 10 109 18.0 19.0 18.5 0.5 160 chr3L 20148267 intergenic not near genes chr3L 20148347 intergenic not near genes chr3L 20148427 intergenic not near genes chr3L_10_20145001 chr3L_20145001 RAL-321 2063 chr3L 20156165 20156193 chr3L 20156295 20156335 7 135 12.5 15.0 13.8 0.5 170 chr3L 20156165 intron CG42674 - chr3L 20156250 intron CG42674 - chr3L 20156335 intron CG42674 - chr3L_7_20155001 chr3L_20155001 RAL-321 2064 chr3L 20157971 20157989 chr3L 20158068 20158106 4 112 14.5 15.5 15.0 0.2 135 chr3L 20157971 intron CG42674 - chr3L 20158038 intron CG42674 - chr3L 20158106 intron CG42674 - chr3L_4_20155001 chr3L_20155001 RAL-321 2065 chr3L 20166199 20166233 chr3L 20166308 20166342 8 109 14.5 13.0 13.8 0.5 143 chr3L 20166199 intron CG42674 - chr3L 20166270 intron CG42674 - chr3L 20166342 intron CG42674 - chr3L_8_20165001 chr3L_20165001 RAL-321 2066 chr3L 20187446 20187457 chr3L 20187545 20187556 5 99 41.0 38.0 39.5 0.1 110 chr3L 20187446 intron CG42674 - chr3L 20187501 intron CG42674 - chr3L 20187556 intron CG42674 - chr3L_5_20185001 chr3L_20185001 RAL-321 2067 chr3L 20187474 20187483 chr3L 20187543 20187582 4 92 35.5 38.5 37.0 0.1 108 chr3L 20187474 intron CG42674 - chr3L 20187528 intron CG42674 - chr3L 20187582 intron CG42674 - chr3L_4_20185001 chr3L_20185001 RAL-321 2068 chr3L 20190526 20190562 chr3L 20190616 20190656 12 95 24.5 16.5 20.5 0.6 130 chr3L 20190526 intron CG42674 - chr3L 20190591 intron CG42674 - chr3L 20190656 intron CG42674 - chr3L_12_20190001 chr3L_20190001 RAL-321 2069 chr3L 20257313 20257363 chr3L 20258453 20258503 pogo 15 1139 13.5 15.5 14.5 1.0 1190 chr3L 20257313 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258503 intron rdgC + chr3L_15_20255001 chr3L_20255001 RAL-321 2070 chr3L 20262791 20262824 chr3L 20262923 20262956 8 128 13.5 15.0 14.2 0.5 165 chr3L 20262791 exon rdgC + chr3L 20262874 intron rdgC + chr3L 20262956 intron rdgC + chr3L_8_20260001 chr3L_20260001 RAL-321 2071 chr3L 20283678 20283707 chr3L 20283760 20283811 8 100 21.5 22.0 21.8 0.4 133 chr3L 20283678 intron gogo - chr3L 20283744 intron gogo - chr3L 20283811 intron gogo - chr3L_8_20280001 chr3L_20280001 RAL-321 2072 chr3L 20345586 20345636 chr3L 20345687 20345736 15 101 20.5 18.5 19.5 0.7 150 chr3L 20345586 intergenic Rbbp5 - chr3L 20345661 intergenic Rbbp5 - chr3L 20345736 3` UTR Rbbp5 - chr3L_15_20345001 chr3L_20345001 RAL-321 2073 chr3L 20386926 20386945 chr3L 20387048 20387067 4 122 18.0 18.0 18.0 0.2 141 chr3L 20386926 intron fbl + chr3L 20386996 intron fbl + chr3L 20387067 intron fbl + chr3L_4_20385001 chr3L_20385001 RAL-321 2074 chr3L 20386947 20386971 chr3L 20387039 20387093 8 118 16.5 18.0 17.2 0.4 146 chr3L 20386947 intron fbl + chr3L 20387020 intron fbl + chr3L 20387093 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-321 2075 chr3L 20447682 20447687 chr3L 20447781 20447786 4 99 23.5 6.5 15.0 0.2 104 chr3L 20447682 intron CG5910 + chr3L 20447734 intron CG5910 + chr3L 20447786 intron CG5910 + chr3L_4_20445001 chr3L_20445001 RAL-321 2076 chr3L 20462567 20462599 chr3L 20462668 20462700 13 101 7.0 1.5 4.2 2.5 133 chr3L 20462567 intron atk - chr3L 20462634 intron atk - chr3L 20462700 intron atk - chr3L_13_20460001 chr3L_20460001 RAL-321 2077 chr3L 20476738 20476784 chr3L 20484357 20484403 springer 22 7618 6.0 6.5 6.2 3.1 7665 chr3L 20476738 3` UTR isoQC + chr3L 20480570 intergenic not near genes chr3L 20484403 3` UTR ZnT77C - chr3L_22_20480001 chr3L_20480001 RAL-321 2078 chr3L 20487648 20487674 chr3L 20488119 20488144 INE-1 8 471 20.5 13.5 17.0 0.4 496 chr3L 20487648 intron ZnT77C - chr3L 20487896 intron ZnT77C - chr3L 20488144 exon ZnT77C - chr3L_8_20485001 chr3L_20485001 RAL-321 2079 chr3L 20490742 20490774 chr3L 20490906 20490939 7 164 10.0 10.5 10.2 0.6 197 chr3L 20490742 intron ZnT77C - chr3L 20490840 intron ZnT77C - chr3L 20490939 intron ZnT77C - chr3L_7_20490001 chr3L_20490001 RAL-321 2080 chr3L 20516609 20516657 chr3L 20516723 20516771 14 109 15.0 15.0 15.0 0.9 162 chr3L 20516609 intron CG5059 - chr3L 20516690 intron CG5059 - chr3L 20516771 intron CG5059 - chr3L_14_20515001 chr3L_20515001 RAL-321 2081 chr3L 20525229 20525230 chr3L 24821491 24821493 4 4296264 25.0 22.0 23.5 0.2 4296264 chr3L 20525229 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-321 2082 chr3L 20590058 20590089 chr3L 20590605 20590643 412 8 549 10.5 5.5 8.0 0.9 585 chr3L 20590058 intergenic not near genes chr3L 20590350 intergenic not near genes chr3L 20590643 intergenic not near genes chr3L_8_20590001 chr3L_20590001 RAL-321 2083 chr3L 20699899 20699925 chr3L 20699999 20700004 7 95 8.0 13.0 10.5 0.6 105 chr3L 20699899 intergenic not near genes chr3L 20699952 intergenic not near genes chr3L 20700004 intergenic not near genes chr3L_7_20695001 chr3L_20695001 RAL-321 2084 chr3L 20710743 20710777 chr3L 20710840 20710874 9 97 4.5 3.5 4.0 1.8 131 chr3L 20710743 intergenic not near genes chr3L 20710808 intergenic not near genes chr3L 20710874 intergenic not near genes chr3L_9_20710001 chr3L_20710001 RAL-321 2085 chr3L 20710778 20710792 chr3L 20710839 20710889 8 91 2.5 3.5 3.0 2.0 111 chr3L 20710778 intergenic not near genes chr3L 20710834 intergenic not near genes chr3L 20710889 intergenic not near genes chr3L_8_20710001 chr3L_20710001 RAL-321 2086 chr3L 13436151 13436159 chr3L 20815827 20815835 6 7379676 10.0 28.0 19.0 0.3 7379684 chr3L 13436151 intron CG10154 - chr3L 17125993 intron Rbp6 - chr3L 20815835 intron CG3618 - chr3L_6_17125001 chr3L_17125001 RAL-321 2087 chr3L 13436150 13436201 chr3L 20815836 20815877 16 7379677 15.5 30.5 23.0 0.7 7379727 chr3L 13436150 intron CG10154 - chr3L 17126014 intron Rbp6 - chr3L 20815877 intron CG3618 - chr3L_16_17125001 chr3L_17125001 RAL-321 2088 chr3L 20821273 20821299 chr3L 20824762 20824788 NOF 8 3489 19.5 17.0 18.2 0.4 3515 chr3L 20821273 intron Pka-R1 + chr3L 20823030 intron Pka-R1 + chr3L 20824788 intron Pka-R1 + chr3L_8_20820001 chr3L_20820001 RAL-321 2089 chr3L 20849254 20849299 chr3L 20849353 20849398 20 99 8.5 10.0 9.2 2.0 144 chr3L 20849254 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849398 intron CG32432 - chr3L_20_20845001 chr3L_20845001 RAL-321 2090 chr3L 20849699 20849746 chr3L 20850068 20850104 8 366 14.5 15.5 15.0 0.5 405 chr3L 20849699 intron CG32432 - chr3L 20849902 intron CG32432 - chr3L 20850104 intron CG32432 - chr3L_8_20845001 chr3L_20845001 RAL-321 2091 chr3L 20886761 20886820 chr3L 20886902 20886911 8 128 6.0 0.0 3.0 2.0 150 chr3L 20886761 intergenic CR44686 - chr3L 20886836 intergenic CR44686 - chr3L 20886911 intergenic CR44686 - chr3L_8_20885001 chr3L_20885001 RAL-321 2092 chr3L 20913733 20913754 chr3L 20913835 20913847 12 99 7.0 6.0 6.5 1.6 114 chr3L 20913733 intergenic CR43930 - chr3L 20913790 intergenic CR43930 - chr3L 20913847 intergenic CR43930 - chr3L_12_20910001 chr3L_20910001 RAL-321 2093 chr3L 20913757 20913777 chr3L 20913832 20913879 9 96 3.5 4.5 4.0 1.8 122 chr3L 20913757 intergenic CR43930 - chr3L 20913818 intergenic CR43930 - chr3L 20913879 intergenic CR43930 - chr3L_9_20910001 chr3L_20910001 RAL-321 2094 chr3L 20986742 20986785 chr3L 20986840 20986883 7 96 12.5 9.5 11.0 0.6 141 chr3L 20986742 intergenic not near genes chr3L 20986812 intergenic not near genes chr3L 20986883 intergenic not near genes chr3L_7_20985001 chr3L_20985001 RAL-321 2095 chr3L 21010360 21010372 chr3L 21010487 21010499 7 126 18.5 19.0 18.8 0.4 139 chr3L 21010360 intron skd - chr3L 21010430 intron skd - chr3L 21010499 intron skd - chr3L_7_21010001 chr3L_21010001 RAL-321 2096 chr3L 21014917 21014948 chr3L 21023401 21023449 Tirant 9 8486 2.0 8.0 5.0 1.5 8532 chr3L 21014917 intron skd - chr3L 21019183 intron skd - chr3L 21023449 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-321 2097 chr3L 21024092 21024145 chr3L 21024291 21024344 16 194 18.5 18.0 18.2 0.8 252 chr3L 21024092 intron skd - chr3L 21024218 intron skd - chr3L 21024344 intron skd - chr3L_16_21020001 chr3L_21020001 RAL-321 2098 chr3L 21057125 21057154 chr3L 21057361 21057390 9 234 16.0 22.5 19.2 0.4 265 chr3L 21057125 intron siz + chr3L 21057258 intron siz + chr3L 21057390 intron siz + chr3L_9_21055001 chr3L_21055001 RAL-321 2099 chr3L 21064772 21064824 chr3L 21064908 21064960 13 136 11.0 12.5 11.8 1.0 188 chr3L 21064772 intron siz + chr3L 21064866 intron siz + chr3L 21064960 intron siz + chr3L_13_21060001 chr3L_21060001 RAL-321 2100 chr3L 21071298 21071340 chr3L 21071481 21071523 12 183 21.5 17.5 19.5 0.6 225 chr3L 21071298 intron siz + chr3L 21071410 intron siz + chr3L 21071523 intron siz + chr3L_12_21070001 chr3L_21070001 RAL-321 2101 chr3L 21082190 21082234 chr3L 21082288 21082332 17 97 22.0 19.0 20.5 0.8 142 chr3L 21082190 intron ko - chr3L 21082261 intron ko - chr3L 21082332 intron ko - chr3L_17_21080001 chr3L_21080001 RAL-321 2102 chr3L 21130549 21130598 chr3L 21130763 21130812 12 214 15.0 18.0 16.5 0.7 263 chr3L 21130549 intron ko - chr3L 21130680 intron ko - chr3L 21130812 5` UTR ko - chr3L_12_21130001 chr3L_21130001 RAL-321 2103 chr3L 21151846 21151894 chr3L 21156950 21156998 flea 17 5103 5.0 5.5 5.2 2.7 5152 chr3L 21151846 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21156998 intron Ac78C - chr3L_17_21150001 chr3L_21150001 RAL-321 2104 chr3L 21163216 21163273 chr3L 21163318 21163360 7 96 2.5 7.0 4.8 1.2 144 chr3L 21163216 intron Ac78C - chr3L 21163288 intron Ac78C - chr3L 21163360 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-321 2105 chr3L 21243742 21243760 chr3L 21251314 21251331 412 4 7572 14.5 10.5 12.5 0.3 7589 chr3L 21243742 intron Eip78C + chr3L 21247536 intron Eip78C + chr3L 21251331 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-321 2106 chr3L 21301717 21301751 chr3L 21301823 21301857 7 106 19.5 17.5 18.5 0.4 140 chr3L 21301717 5` UTR CR45432 + chr3L 21301787 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301857 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_7_21300001 chr3L_21300001 RAL-321 2107 chr3L 21306128 21306178 chr3L 21315307 21315357 roo 23 9179 8.0 7.5 7.8 2.6 9229 chr3L 21306128 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315357 3` UTR Pc - chr3L_23_21310001 chr3L_21310001 RAL-321 2108 chr3L 21319510 21319559 chr3L 21319620 21319669 13 110 24.5 23.0 23.8 0.5 159 chr3L 21319510 5` UTR Rab26 + chr3L 21319590 5` UTR Rab26 + chr3L 21319669 5` UTR Rab26 + chr3L_13_21315001 chr3L_21315001 RAL-321 2109 chr3L 21361706 21361751 chr3L 21362680 21362725 G2 23 973 6.5 5.5 6.0 3.3 1019 chr3L 21361706 intergenic CG32440 + chr3L 21362216 intergenic not near genes chr3L 21362725 intergenic not near genes chr3L_23_21360001 chr3L_21360001 RAL-321 2110 chr3L 21362840 21362877 chr3L 21362937 21362981 7 103 23.0 22.0 22.5 0.3 141 chr3L 21362840 intergenic not near genes chr3L 21362910 intergenic not near genes chr3L 21362981 intergenic not near genes chr3L_7_21360001 chr3L_21360001 RAL-321 2111 chr3L 21372706 21372754 chr3L 21379234 21379281 McClintock 13 6528 7.0 6.0 6.5 1.7 6575 chr3L 21372706 intergenic not near genes chr3L 21375994 intergenic not near genes chr3L 21379281 intergenic not near genes chr3L_13_21375001 chr3L_21375001 RAL-321 2112 chr3L 21395130 21395134 chr3L 21395232 21395242 4 104 19.0 17.5 18.2 0.2 112 chr3L 21395130 intron rgn + chr3L 21395186 intron rgn + chr3L 21395242 intron rgn + chr3L_4_21395001 chr3L_21395001 RAL-321 2113 chr3L 21395139 21395175 chr3L 21395227 21395260 10 103 17.5 17.5 17.5 0.5 121 chr3L 21395139 intron rgn + chr3L 21395200 intron rgn + chr3L 21395260 intron rgn + chr3L_10_21395001 chr3L_21395001 RAL-321 2114 chr3L 21406976 21407010 chr3L 21407075 21407109 6 96 11.5 10.0 10.8 0.5 133 chr3L 21406976 intron rgn + chr3L 21407042 intron rgn + chr3L 21407109 intron rgn + chr3L_6_21405001 chr3L_21405001 RAL-321 2115 chr3L 21415891 21415909 chr3L 21415993 21416026 10 114 15.0 14.5 14.8 0.6 135 chr3L 21415891 intron rgn + chr3L 21415958 intron rgn + chr3L 21416026 intron rgn + chr3L_10_21415001 chr3L_21415001 RAL-321 2116 chr3L 21498831 21498855 chr3L 21500473 21500511 1360 10 1652 12.0 10.5 11.2 0.8 1680 chr3L 21498831 intron Glg1 - chr3L 21499671 intron Glg1 - chr3L 21500511 intron Glg1 - chr3L_10_21495001 chr3L_21495001 RAL-321 2117 chr3L 21501160 21501171 chr3L 21501274 21501284 1360 5 114 20.0 26.0 23.0 0.2 124 chr3L 21501160 intron Glg1 - chr3L 21501222 intron Glg1 - chr3L 21501284 intron Glg1 - chr3L_5_21500001 chr3L_21500001 RAL-321 2118 chr3L 21649759 21649796 chr3L 21650003 21650040 8 241 15.0 20.0 17.5 0.4 281 chr3L 21649759 intron CG43980 + chr3L 21649900 intron CG43980 + chr3L 21650040 intron CG43980 + chr3L_8_21645001 chr3L_21645001 RAL-321 2119 chr3L 21653502 21653536 chr3L 21653601 21653635 6 96 20.0 20.0 20.0 0.3 133 chr3L 21653502 intron CG43980 + chr3L 21653568 intron CG43980 + chr3L 21653635 intron CG43980 + chr3L_6_21650001 chr3L_21650001 RAL-321 2120 chr3L 21749300 21749350 chr3L 21754479 21754501 Doc 10 5172 5.0 7.0 6.0 1.4 5201 chr3L 21749300 intron Syn1 - chr3L 21751900 intron Syn1 - chr3L 21754501 intron Syn1 - chr3L_10_21750001 chr3L_21750001 RAL-321 2121 chr3L 21769039 21769085 chr3L 21769146 21769167 20 105 15.5 14.5 15.0 1.2 128 chr3L 21769039 intron,intron Syn1 -,CG42689 + chr3L 21769103 intron,intron Syn1 -,CG42689 + chr3L 21769167 intron,intron Syn1 -,CG42689 + chr3L_20_21765001 chr3L_21765001 RAL-321 2122 chr3L 21770032 21770039 chr3L 21770130 21770146 6 103 5.5 7.5 6.5 0.8 114 chr3L 21770032 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770089 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770146 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_6_21770001 chr3L_21770001 RAL-321 2123 chr3L 21776666 21776701 chr3L 21776773 21776807 11 107 3.0 4.0 3.5 2.4 141 chr3L 21776666 intron,intron CG42689 +,CG42552 + chr3L 21776736 intron,intron CG42689 +,CG42552 + chr3L 21776807 intron,intron CG42689 +,CG42552 + chr3L_11_21775001 chr3L_21775001 RAL-321 2124 chr3L 21798748 21798795 chr3L 21798857 21798904 14 109 7.5 8.0 7.8 1.6 156 chr3L 21798748 intergenic not near genes chr3L 21798826 intergenic not near genes chr3L 21798904 intergenic not near genes chr3L_14_21795001 chr3L_21795001 RAL-321 2125 chr3L 21836718 21836761 chr3L 21836824 21836867 9 106 16.0 19.5 17.8 0.5 149 chr3L 21836718 3` UTR P5CDh1 - chr3L 21836792 3` UTR P5CDh1 - chr3L 21836867 3` UTR P5CDh1 - chr3L_9_21835001 chr3L_21835001 RAL-321 2126 chr3L 21865570 21865606 chr3L 21865691 21865728 6 124 21.0 25.0 23.0 0.2 158 chr3L 21865570 intron mub + chr3L 21865649 intron mub + chr3L 21865728 intron mub + chr3L_6_21865001 chr3L_21865001 RAL-321 2127 chr3L 21868333 21868365 chr3L 21868677 21868709 INE-1 6 344 19.0 16.5 17.8 0.3 376 chr3L 21868333 intron mub + chr3L 21868521 intron mub + chr3L 21868709 intron mub + chr3L_6_21865001 chr3L_21865001 RAL-321 2128 chr3L 21883794 21883843 chr3L 21883894 21883943 14 100 19.0 19.5 19.2 0.7 149 chr3L 21883794 intron mub + chr3L 21883868 intron mub + chr3L 21883943 intron mub + chr3L_14_21880001 chr3L_21880001 RAL-321 2129 chr3L 21902207 21902257 chr3L 21902618 21902641 18 409 17.5 23.0 20.2 0.8 434 chr3L 21902207 intron mub + chr3L 21902424 intron mub + chr3L 21902641 intron mub + chr3L_18_21900001 chr3L_21900001 RAL-321 2130 chr3L 21905320 21905511 chr3L 21905415 21905618 17 100 14.0 18.5 16.2 1.0 298 chr3L 21905320 intron mub + chr3L 21905469 intron mub + chr3L 21905618 intron mub + chr3L_17_21905001 chr3L_21905001 RAL-321 2131 chr3L 21913782 21913814 chr3L 21914023 21914055 12 241 18.5 19.5 19.0 0.6 273 chr3L 21913782 intron mub + chr3L 21913918 intron mub + chr3L 21914055 intron mub + chr3L_12_21910001 chr3L_21910001 RAL-321 2132 chr3L 21918684 21918725 chr3L 21918877 21918920 10 194 17.0 18.5 17.8 0.5 236 chr3L 21918684 intron mub + chr3L 21918802 intron mub + chr3L 21918920 intron mub + chr3L_10_21915001 chr3L_21915001 RAL-321 2133 chr3L 22033669 22033723 chr3L 22033767 22033821 17 96 17.0 18.0 17.5 0.9 152 chr3L 22033669 intergenic not near genes chr3L 22033745 intergenic not near genes chr3L 22033821 intergenic not near genes chr3L_17_22030001 chr3L_22030001 RAL-321 2134 chr3L 22034595 22034630 chr3L 22034717 22034754 7 122 16.5 20.0 18.2 0.4 159 chr3L 22034595 intergenic Oct-TyrR + chr3L 22034674 intergenic Oct-TyrR + chr3L 22034754 intergenic Oct-TyrR + chr3L_7_22030001 chr3L_22030001 RAL-321 2135 chr3L 22046166 22046211 chr3L 22046289 22046334 12 123 20.5 21.5 21.0 0.5 168 chr3L 22046166 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046334 intron Oct-TyrR + chr3L_12_22045001 chr3L_22045001 RAL-321 2136 chr3L 22074938 22074946 chr3L 22075069 22075077 5 131 21.0 18.0 19.5 0.2 139 chr3L 22074938 intergenic CG7130 -,CG7133 - chr3L 22075008 intergenic CG7130 -,CG7133 - chr3L 22075077 3` UTR CG7130 - chr3L_5_22075001 chr3L_22075001 RAL-321 2137 chr3L 22099657 22099705 chr3L 22105863 22105911 3S18 19 6204 9.0 9.5 9.2 1.9 6254 chr3L 22099657 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_19_22100001 chr3L_22100001 RAL-321 2138 chr3L 22122150 22122201 chr3L 22122514 22122562 12 361 21.0 4.5 12.8 0.9 412 chr3L 22122150 5` UTR CR45236 + chr3L 22122356 intergenic CR45236 +,CR45235 + chr3L 22122562 intergenic CR45235 +,CR45236 + chr3L_12_22120001 chr3L_22120001 RAL-321 2139 chr3L 22129961 22129992 chr3L 22130118 22130152 4 160 7.0 7.5 7.2 0.5 191 chr3L 22129961 intergenic not near genes chr3L 22130056 intergenic not near genes chr3L 22130152 intergenic not near genes chr3L_4_22130001 chr3L_22130001 RAL-321 2140 chr3L 22130479 22130523 chr3L 22130645 22130689 27 166 6.5 7.0 6.8 3.5 210 chr3L 22130479 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130689 intergenic not near genes chr3L_27_22130001 chr3L_22130001 RAL-321 2141 chr3L 22137505 22137552 chr3L 22137602 22137649 12 96 21.0 18.0 19.5 0.6 144 chr3L 22137505 intron olf413 + chr3L 22137577 intron olf413 + chr3L 22137649 intron olf413 + chr3L_12_22135001 chr3L_22135001 RAL-321 2142 chr3L 22249315 22249348 chr3L 22249411 22249429 5 87 14.0 11.5 12.8 0.4 114 chr3L 22249315 intergenic not near genes chr3L 22249372 intergenic not near genes chr3L 22249429 intergenic not near genes chr3L_5_22245001 chr3L_22245001 RAL-321 2143 chr3L 22328073 22328092 chr3L 22328159 22328199 5 108 9.5 10.5 10.0 0.5 126 chr3L 22328073 intron Ten-m - chr3L 22328136 intron Ten-m - chr3L 22328199 intron Ten-m - chr3L_5_22325001 chr3L_22325001 RAL-321 2144 chr3L 22369306 22369344 chr3L 22369437 22369475 10 131 19.5 14.5 17.0 0.6 169 chr3L 22369306 intron Ten-m - chr3L 22369390 intron Ten-m - chr3L 22369475 intron Ten-m - chr3L_10_22365001 chr3L_22365001 RAL-321 2145 chr3L 22422847 22422868 chr3L 22422923 22422933 4 76 10.0 8.5 9.2 0.4 86 chr3L 22422847 intergenic not near genes chr3L 22422890 intergenic not near genes chr3L 22422933 intergenic not near genes chr3L_4_22420001 chr3L_22420001 RAL-321 2146 chr3L 22435573 22435608 chr3L 22435656 22435704 8 91 15.5 13.5 14.5 0.5 131 chr3L 22435573 intergenic not near genes chr3L 22435638 intergenic not near genes chr3L 22435704 intergenic not near genes chr3L_8_22435001 chr3L_22435001 RAL-321 2147 chr3L 22438619 22438661 chr3L 22440122 22440162 11 1499 35.5 34.0 34.8 0.3 1543 chr3L 22438619 intergenic not near genes chr3L 22439390 intergenic not near genes chr3L 22440162 intergenic not near genes chr3L_11_22435001 chr3L_22435001 RAL-321 2148 chr3L 22443869 22443916 chr3L 22444306 22444353 6 437 5.5 14.5 10.0 0.5 484 chr3L 22443869 intergenic not near genes chr3L 22444111 intergenic not near genes chr3L 22444353 intergenic not near genes chr3L_6_22440001 chr3L_22440001 RAL-321 2149 chr3L 22447178 22447225 chr3L 22447289 22447336 14 111 21.5 20.5 21.0 0.6 158 chr3L 22447178 intergenic not near genes chr3L 22447257 intergenic not near genes chr3L 22447336 intergenic not near genes chr3L_14_22445001 chr3L_22445001 RAL-321 2150 chr3L 22477034 22477085 chr3L 22477144 22477196 7 107 6.0 10.5 8.2 0.8 162 chr3L 22477034 intergenic not near genes chr3L 22477115 intergenic not near genes chr3L 22477196 intergenic not near genes chr3L_7_22475001 chr3L_22475001 RAL-321 2151 chr3L 22522677 22522729 chr3L 22522774 22522826 17 97 23.5 19.0 21.2 0.8 149 chr3L 22522677 intergenic not near genes chr3L 22522752 intergenic not near genes chr3L 22522826 intergenic not near genes chr3L_17_22520001 chr3L_22520001 RAL-321 2152 chr3L 22543072 22543099 chr3L 22543169 22543196 8 97 19.5 16.5 18.0 0.4 124 chr3L 22543072 intergenic not near genes chr3L 22543134 intergenic not near genes chr3L 22543196 intergenic not near genes chr3L_8_22540001 chr3L_22540001 RAL-321 2153 chr3L 22555749 22555793 chr3L 22563239 22563270 blood 18 7486 4.5 2.0 3.2 4.3 7521 chr3L 22555749 intergenic not near genes chr3L 22559510 intergenic not near genes chr3L 22563270 intergenic not near genes chr3L_18_22555001 chr3L_22555001 RAL-321 2154 chr3L 22570416 22570458 chr3L 22570573 22570622 15 160 23.0 25.5 24.2 0.6 206 chr3L 22570416 intergenic not near genes chr3L 22570519 intergenic not near genes chr3L 22570622 intergenic not near genes chr3L_15_22570001 chr3L_22570001 RAL-321 2155 chr3L 22577614 22577619 chr3L 22582415 22582427 Doc 4 4806 10.0 11.5 10.8 0.3 4813 chr3L 22577614 intergenic not near genes chr3L 22580020 intergenic not near genes chr3L 22582427 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-321 2156 chr3L 22577624 22577644 chr3L 22582402 22582452 Doc 10 4801 6.0 8.0 7.0 1.2 4828 chr3L 22577624 intergenic not near genes chr3L 22580038 intergenic not near genes chr3L 22582452 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-321 2157 chr3L 22617173 22617221 chr3L 22624645 22624693 blood 23 7471 5.5 8.5 7.0 2.9 7520 chr3L 22617173 intron CG14459 - chr3L 22620933 intron CG14459 - chr3L 22624693 intron CG14459 - chr3L_23_22620001 chr3L_22620001 RAL-321 2158 chr3L 22678067 22678078 chr3L 22678180 22678180 6 111 19.5 15.5 17.5 0.3 113 chr3L 22678067 intron CG14457 + chr3L 22678124 intron CG14457 + chr3L 22678180 intron CG14457 + chr3L_6_22675001 chr3L_22675001 RAL-321 2159 chr3L 22678080 22678086 chr3L 22678178 22678189 4 100 19.5 16.0 17.8 0.2 109 chr3L 22678080 intron CG14457 + chr3L 22678134 intron CG14457 + chr3L 22678189 intron CG14457 + chr3L_4_22675001 chr3L_22675001 RAL-321 2160 chr3L 22678097 22678110 chr3L 22678175 22678211 4 101 17.0 15.0 16.0 0.2 114 chr3L 22678097 intron CG14457 + chr3L 22678154 intron CG14457 + chr3L 22678211 intron CG14457 + chr3L_4_22675001 chr3L_22675001 RAL-321 2161 chr3L 22731873 22731885 chr3L 22731973 22731985 5 100 23.0 21.0 22.0 0.2 112 chr3L 22731873 intron CG11367 + chr3L 22731929 intron CG11367 + chr3L 22731985 intron CG11367 + chr3L_5_22730001 chr3L_22730001 RAL-321 2162 chr3L 22761369 22761414 chr3L 22766823 22766868 Ivk 21 5453 8.5 7.0 7.8 2.4 5499 chr3L 22761369 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766868 intron SPoCk + chr3L_21_22760001 chr3L_22760001 RAL-321 2163 chr3L 22853674 22853721 chr3L 22853780 22853820 21 105 4.5 8.5 6.5 2.8 146 chr3L 22853674 5` UTR CR43426 + chr3L 22853747 5` UTR CR43426 + chr3L 22853820 5` UTR CR43426 + chr3L_21_22850001 chr3L_22850001 RAL-321 2164 chr3L 22865968 22866005 chr3L 22867121 22867158 Doc 13 1151 11.0 10.0 10.5 1.1 1190 chr3L 22865968 intron CG33170 + chr3L 22866563 intron CG33170 + chr3L 22867158 intron CG33170 + chr3L_13_22865001 chr3L_22865001 RAL-321 2165 chr3L 22897180 22897188 chr3L 22897279 22897291 8 100 6.5 4.5 5.5 1.2 111 chr3L 22897180 intergenic not near genes chr3L 22897236 intergenic not near genes chr3L 22897291 intergenic not near genes chr3L_8_22895001 chr3L_22895001 RAL-321 2166 chr3L 22897191 22897222 chr3L 22897277 22897325 17 99 6.5 4.0 5.2 2.7 134 chr3L 22897191 intergenic not near genes chr3L 22897258 intergenic not near genes chr3L 22897325 intergenic not near genes chr3L_17_22895001 chr3L_22895001 RAL-321 2167 chr3L 1463476 1463479 chr3L 22908066 22908066 4 21444589 11.0 37.5 24.2 0.2 21444590 chr3L 1463476 intron Ptp61F - chr3L 12185771 intron CG6910 + chr3L 22908066 intergenic not near genes chr3L_4_12185001 chr3L_12185001 RAL-321 2168 chr3L 19220633 19220635 chr3L 22908066 22908066 4 3687432 35.0 37.5 36.2 0.1 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-321 2169 chr3L 20525228 20525230 chr3L 22908066 22908066 5 2382837 25.0 37.5 31.2 0.2 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-321 2170 chr3L 22908066 22908066 chr3L 24821493 24821495 5 1913428 36.5 23.0 29.8 0.2 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_5_23860001 chr3L_23860001 RAL-321 2171 chr3L 22909007 22909049 chr3L 22909118 22909157 9 108 14.5 13.5 14.0 0.6 150 chr3L 22909007 intergenic CR45661 + chr3L 22909082 intergenic CR45661 + chr3L 22909157 intergenic CR45661 + chr3L_9_22905001 chr3L_22905001 RAL-321 2172 chr3L 22949178 22949220 chr3L 22949286 22949318 24 107 5.0 6.5 5.8 3.5 140 chr3L 22949178 intron Mes2 + chr3L 22949248 intron Mes2 + chr3L 22949318 intron Mes2 + chr3L_24_22945001 chr3L_22945001 RAL-321 2173 chr3L 22989844 22989890 chr3L 22996838 22996883 297 17 6994 7.0 9.0 8.0 1.9 7039 chr3L 22989844 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996883 intergenic not near genes chr3L_17_22990001 chr3L_22990001 RAL-321 2174 chr3L 23011127 23011175 chr3L 23011224 23011272 12 97 15.5 15.5 15.5 0.7 145 chr3L 23011127 intron nrm + chr3L 23011200 intron nrm + chr3L 23011272 intron nrm + chr3L_12_23010001 chr3L_23010001 RAL-321 2175 chr3L 23126006 23126027 chr3L 23126124 23126145 5 118 16.0 16.0 16.0 0.3 139 chr3L 23126006 intergenic CG33217 + chr3L 23126076 5` UTR CG33217 + chr3L 23126145 intron CG33217 + chr3L_5_23125001 chr3L_23125001 RAL-321 2176 chr3L 23205428 23205444 chr3L 23205678 23205694 7 249 23.0 13.0 18.0 0.4 266 chr3L 23205428 intergenic not near genes chr3L 23205561 intergenic not near genes chr3L 23205694 intergenic not near genes chr3L_7_23205001 chr3L_23205001 RAL-321 2177 chr3L 23255123 23255173 chr3L 23255282 23255332 7 157 11.0 9.5 10.2 0.6 209 chr3L 23255123 intron nAChRalpha4 + chr3L 23255228 intron nAChRalpha4 + chr3L 23255332 intron nAChRalpha4 + chr3L_7_23255001 chr3L_23255001 RAL-321 2178 chr3L 23666289 23666307 chr3L 23666414 23666428 4 121 23.5 23.0 23.2 0.2 139 chr3L 23666289 intron AGO3 + chr3L 23666358 intron AGO3 + chr3L 23666428 intron AGO3 + chr3L_4_23665001 chr3L_23665001 RAL-321 2179 chr3L 23824015 23824047 chr3L 23824436 23824479 10 431 12.5 14.0 13.2 0.7 464 chr3L 23824015 intergenic not near genes chr3L 23824247 intergenic not near genes chr3L 23824479 intergenic not near genes chr3L_10_23820001 chr3L_23820001 RAL-321 2180 chr3L 23848819 23848836 chr3L 23849663 23849680 R1A1-element 6 844 13.5 14.0 13.8 0.4 861 chr3L 23848819 intron CG40470 - chr3L 23849250 intron CG40470 - chr3L 23849680 intron CG40470 - chr3L_6_23845001 chr3L_23845001 RAL-321 2181 chr3L 23875509 23875542 chr3L 23875610 23875617 5 96 14.5 13.0 13.8 0.3 108 chr3L 23875509 intron CG40470 - chr3L 23875563 intron CG40470 - chr3L 23875617 intron CG40470 - chr3L_5_23875001 chr3L_23875001 RAL-321 2182 chr3L 24012391 24012436 chr3L 24020752 24020797 roo 24 8358 7.0 9.0 8.0 2.7 8406 chr3L 24012391 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020797 intergenic not near genes chr3L_24_24015001 chr3L_24015001 RAL-321 2183 chr3L 24021260 24021311 chr3L 24022437 24022488 1360 11 1171 14.0 13.5 13.8 0.7 1228 chr3L 24021260 intergenic not near genes chr3L 24021874 intergenic not near genes chr3L 24022488 intergenic not near genes chr3L_11_24020001 chr3L_24020001 RAL-321 2184 chr3L 24036765 24036806 chr3L 24036875 24036917 8 110 20.0 15.0 17.5 0.4 152 chr3L 24036765 intergenic not near genes chr3L 24036841 intergenic not near genes chr3L 24036917 intergenic not near genes chr3L_8_24035001 chr3L_24035001 RAL-321 2185 chr3L 24168623 24168660 chr3L 24176389 24176401 ZAM 5 7763 14.0 14.0 14.0 0.3 7778 chr3L 24168623 intron Snap25 + chr3L 24172512 intron Snap25 + chr3L 24176401 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-321 2186 chr3L 24168769 24168822 chr3L 24176117 24176149 ZAM 4 7342 1.0 2.0 1.5 1.6 7380 chr3L 24168769 intron Snap25 + chr3L 24172459 intron Snap25 + chr3L 24176149 intron Snap25 + chr3L_4_24170001 chr3L_24170001 RAL-321 2187 chr3L 24290478 24290506 chr3L 24290836 24290855 5 357 11.5 11.0 11.2 0.4 377 chr3L 24290478 intron,3` UTR Snap25 +,CR45159 - chr3L 24290666 intron,3` UTR Snap25 +,CR45159 - chr3L 24290855 intron,3` UTR Snap25 +,CR45159 - chr3L_5_24290001 chr3L_24290001 RAL-321 2188 chr3L 24303762 24303775 chr3L 24303851 24303874 4 96 11.5 12.0 11.8 0.3 112 chr3L 24303762 intergenic not near genes chr3L 24303818 intergenic not near genes chr3L 24303874 intergenic not near genes chr3L_4_24300001 chr3L_24300001 RAL-321 2189 chr3L 24324279 24324325 chr3L 24324394 24324440 8 114 10.5 11.5 11.0 0.7 161 chr3L 24324279 intergenic not near genes chr3L 24324360 intergenic not near genes chr3L 24324440 intergenic nvd + chr3L_8_24320001 chr3L_24320001 RAL-321 2190 chr3L 24351940 24351993 chr3L 24352045 24352098 11 104 13.0 15.0 14.0 0.7 158 chr3L 24351940 intron nvd + chr3L 24352019 intron nvd + chr3L 24352098 intron nvd + chr3L_11_24350001 chr3L_24350001 RAL-321 2191 chr3L 24363232 24363263 chr3L 24363330 24363361 10 98 16.5 16.5 16.5 0.6 129 chr3L 24363232 intron nvd + chr3L 24363296 intron nvd + chr3L 24363361 intron nvd + chr3L_10_24360001 chr3L_24360001 RAL-321 2192 chr3L 24368469 24368502 chr3L 24368578 24368610 4 103 9.5 14.5 12.0 0.3 141 chr3L 24368469 intron nvd + chr3L 24368540 intron nvd + chr3L 24368610 intron nvd + chr3L_4_24365001 chr3L_24365001 RAL-321 2193 chr3L 24791883 24791916 chr3L 24796674 24796715 Doc 10 4798 6.5 7.0 6.8 1.3 4832 chr3L 24791883 intergenic not near genes chr3L 24794299 intergenic not near genes chr3L 24796715 intergenic not near genes chr3L_10_24790001 chr3L_24790001 RAL-321 2194 chr3L 25502177 25502220 chr3L 25502300 25502317 4 116 23.5 19.5 21.5 0.2 140 chr3L 25502177 intron CG41343 - chr3L 25502247 intron CG41343 - chr3L 25502317 intron CG41343 - chr3L_4_25500001 chr3L_25500001 RAL-321 2195 chr3L 25513557 25513594 chr3L 25513656 25513693 8 98 15.5 14.0 14.8 0.5 136 chr3L 25513557 intron CG41343 - chr3L 25513625 intron CG41343 - chr3L 25513693 intron CG41343 - chr3L_8_25510001 chr3L_25510001 RAL-321 2196 chr3L 25628489 25628504 chr3L 25633274 25633295 F-element 4 4786 15.5 11.0 13.2 0.3 4806 chr3L 25628489 intron CG41343 - chr3L 25630892 intron CG41343 - chr3L 25633295 intron CG41343 - chr3L_4_25630001 chr3L_25630001 RAL-321 2197 chr3L 25635694 25635728 chr3L 25635985 25636020 6 291 13.5 13.0 13.2 0.4 326 chr3L 25635694 intron CG41343 - chr3L 25635857 intron CG41343 - chr3L 25636020 intron CG41343 - chr3L_6_25635001 chr3L_25635001 RAL-321 2198 chr3L 25842479 25842489 chr3L 25842585 25842595 4 106 19.5 22.0 20.8 0.2 116 chr3L 25842479 intron CG40178 - chr3L 25842537 intron CG40178 - chr3L 25842595 intron CG40178 - chr3L_4_25840001 chr3L_25840001 RAL-321 2199 chr3L 23289001 23289035 chr3L 25843662 25843696 11 2554661 39.5 32.5 36.0 0.3 2554695 chr3L 23289001 intergenic not near genes chr3L 24566348 intergenic not near genes chr3L 25843696 intron CG40178 - chr3L_11_24565001 chr3L_24565001 RAL-321 2200 chr3L 26008753 26008771 chr3L 26008920 26008932 6 165 16.5 15.5 16.0 0.4 179 chr3L 26008753 intron CG40178 - chr3L 26008842 intron CG40178 - chr3L 26008932 intron CG40178 - chr3L_6_26005001 chr3L_26005001 RAL-321 2201 chr3L 26008777 26008784 chr3L 26008919 26008951 4 161 15.5 15.0 15.2 0.2 174 chr3L 26008777 intron CG40178 - chr3L 26008864 intron CG40178 - chr3L 26008951 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-321 2202 chr3L 26009404 26009448 chr3L 26009515 26009550 10 110 13.5 12.0 12.8 0.7 146 chr3L 26009404 intron CG40178 - chr3L 26009477 intron CG40178 - chr3L 26009550 intron CG40178 - chr3L_10_26005001 chr3L_26005001 RAL-321 2203 chr3L 26694910 26694959 chr3L 26695010 26695042 12 92 15.0 13.0 14.0 0.8 132 chr3L 26694910 intergenic not near genes chr3L 26694976 intergenic not near genes chr3L 26695042 intergenic not near genes chr3L_12_26690001 chr3L_26690001 RAL-321 2204 chr3L 26717647 26717688 chr3L 26717743 26717784 6 96 11.0 12.5 11.8 0.5 137 chr3L 26717647 intergenic not near genes chr3L 26717716 intergenic not near genes chr3L 26717784 intergenic not near genes chr3L_6_26715001 chr3L_26715001 RAL-321 2205 chr3L 27269420 27269460 chr3L 27269523 27269563 5 100 12.5 15.0 13.8 0.3 143 chr3L 27269420 intergenic not near genes chr3L 27269492 intergenic not near genes chr3L 27269563 intergenic not near genes chr3L_5_27265001 chr3L_27265001 RAL-321 2206 chr3L 27356100 27356105 chr3L 27357319 27357324 1360 4 1219 18.5 18.5 18.5 0.2 1224 chr3L 27356100 intron Dbp80 + chr3L 27356712 intron Dbp80 + chr3L 27357324 intron Dbp80 + chr3L_4_27355001 chr3L_27355001 RAL-321 2207 chr3L 27368857 27368903 chr3L 27369422 27369463 19 563 17.5 17.0 17.2 1.0 606 chr3L 27368857 intron Dbp80 + chr3L 27369160 intron Dbp80 + chr3L 27369463 intron Dbp80 + chr3L_19_27365001 chr3L_27365001 RAL-321 2208 chr3L 27390439 27390709 chr3L 27390680 27390788 10 107 34.0 31.0 32.5 0.3 349 chr3L 27390439 intron Dbp80 + chr3L 27390614 intron Dbp80 + chr3L 27390788 intron Dbp80 + chr3L_10_27390001 chr3L_27390001 RAL-321 2209 chr3L 27422683 27422721 chr3L 27422785 27422823 10 102 20.5 20.0 20.2 0.5 140 chr3L 27422683 intergenic not near genes chr3L 27422753 intergenic not near genes chr3L 27422823 intergenic not near genes chr3L_10_27420001 chr3L_27420001 RAL-321 2210 chr3L 27727625 27727646 chr3L 27728752 27728762 G-element 4 1123 14.0 21.0 17.5 0.2 1137 chr3L 27727625 intergenic not near genes chr3L 27728194 intergenic not near genes chr3L 27728762 intergenic not near genes chr3L_4_27725001 chr3L_27725001 RAL-321 2211 chr3L 27980684 27980730 chr3L 27985502 27985544 Doc 6 4817 13.0 7.5 10.2 0.5 4860 chr3L 27980684 intron CG17514 - chr3L 27983114 intron CG17514 - chr3L 27985544 intron CG17514 - chr3L_6_27980001 chr3L_27980001 RAL-321 2212 chr3R 97111 97113 chr3R 99847 99849 5 2736 30.0 17.5 23.8 0.2 2738 chr3R 97111 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99849 intergenic not near genes chr3R_5_95001 chr3R_95001 RAL-321 2213 chr3R 1830800 1830841 chr3R 1830891 1830941 5 98 11.5 9.5 10.5 0.4 141 chr3R 1830800 intergenic not near genes chr3R 1830870 intergenic not near genes chr3R 1830941 intergenic not near genes chr3R_5_1830001 chr3R_1830001 RAL-321 2214 chr3R 2157567 2157616 chr3R 2160167 2160216 transib2 8 2600 29.5 28.5 29.0 0.3 2649 chr3R 2157567 intergenic not near genes chr3R 2158892 intergenic not near genes chr3R 2160216 intergenic not near genes chr3R_8_2155001 chr3R_2155001 RAL-321 2215 chr3R 2534121 2534149 chr3R 2541706 2541712 12 7582 13.5 20.0 16.8 0.7 7591 chr3R 2534121 intergenic not near genes chr3R 2537916 intergenic not near genes chr3R 2541712 intergenic not near genes chr3R_12_2535001 chr3R_2535001 RAL-321 2216 chr3R 2534159 2534167 chr3R 2541700 2541756 5 7574 10.0 20.0 15.0 0.3 7597 chr3R 2534159 intergenic not near genes chr3R 2537958 intergenic not near genes chr3R 2541756 intergenic not near genes chr3R_5_2535001 chr3R_2535001 RAL-321 2217 chr3R 2556878 2556925 chr3R 2557591 2557638 19 714 28.5 18.0 23.2 0.8 760 chr3R 2556878 intron CG41056 - chr3R 2557258 intron CG41056 - chr3R 2557638 intron CG41056 - chr3R_19_2555001 chr3R_2555001 RAL-321 2218 chr3R 3521533 3521576 chr3R 3521801 3521844 7 265 17.0 15.5 16.2 0.4 311 chr3R 3521533 intron Parp - chr3R 3521688 intron Parp - chr3R 3521844 intron Parp - chr3R_7_3520001 chr3R_3520001 RAL-321 2219 chr3R 3796817 3796870 chr3R 3797263 3797317 12 430 15.0 18.5 16.8 0.7 500 chr3R 3796817 intergenic not near genes chr3R 3797067 intergenic not near genes chr3R 3797317 intergenic not near genes chr3R_12_3795001 chr3R_3795001 RAL-321 2220 chr3R 3916190 3916209 chr3R 3916317 3916336 5 127 24.5 23.0 23.8 0.2 146 chr3R 3916190 intergenic not near genes chr3R 3916263 intergenic not near genes chr3R 3916336 intergenic not near genes chr3R_5_3915001 chr3R_3915001 RAL-321 2221 chr3R 4063792 4063829 chr3R 4069092 4069104 8 5294 14.0 23.5 18.8 0.4 5312 chr3R 4063792 intergenic not near genes chr3R 4066448 intergenic not near genes chr3R 4069104 intergenic not near genes chr3R_8_4065001 chr3R_4065001 RAL-321 2222 chr3R 3989289 3989300 chr3R 4068948 4068949 mdg1 4 79652 15.0 28.0 21.5 0.2 79660 chr3R 3989289 intergenic not near genes chr3R 4029119 intergenic not near genes chr3R 4068949 intergenic not near genes chr3R_4_4025001 chr3R_4025001 RAL-321 2223 chr3R 4105023 4105065 chr3R 4110247 4110289 copia 10 5224 3.0 5.5 4.2 1.9 5266 chr3R 4105023 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110289 intergenic not near genes chr3R_10_4105001 chr3R_4105001 RAL-321 2224 chr3R 4132880 4132930 chr3R 4133054 4133095 19 174 2.5 3.0 2.8 5.0 215 chr3R 4132880 intron Gfat1 + chr3R 4132988 intron Gfat1 + chr3R 4133095 intron Gfat1 + chr3R_19_4130001 chr3R_4130001 RAL-321 2225 chr3R 4190636 4190674 chr3R 4190826 4190864 9 190 23.0 16.0 19.5 0.4 228 chr3R 4190636 intergenic Dsk - chr3R 4190750 intergenic Dsk - chr3R 4190864 intergenic not near genes chr3R_9_4190001 chr3R_4190001 RAL-321 2226 chr3R 4206056 4206102 chr3R 4211651 4211697 mdg3 19 5593 5.5 7.5 6.5 2.5 5641 chr3R 4206056 intron CG14636 - chr3R 4208876 intron CG14636 - chr3R 4211697 intron CG14636 - chr3R_19_4205001 chr3R_4205001 RAL-321 2227 chr3R 4215873 4215914 chr3R 4222606 4222646 10 6735 40.0 34.0 37.0 0.3 6773 chr3R 4215873 intron aux + chr3R 4219260 intron,exon aux +,CG31516 - chr3R 4222646 exon aux + chr3R_10_4215001 chr3R_4215001 RAL-321 2228 chr3R 4291725 4291746 chr3R 4291805 4291844 4 94 14.0 10.5 12.2 0.3 119 chr3R 4291725 intron cpx + chr3R 4291784 intron cpx + chr3R 4291844 intron cpx + chr3R_4_4290001 chr3R_4290001 RAL-321 2229 chr3R 4366748 4366787 chr3R 4375140 4375189 roo 16 8400 8.0 5.0 6.5 2.1 8441 chr3R 4366748 3` UTR CG1090 + chr3R 4370968 intergenic not near genes chr3R 4375189 5` UTR CR44922 + chr3R_16_4370001 chr3R_4370001 RAL-321 2230 chr3R 4408398 4408410 chr3R 4412722 4412729 Juan 9 4323 16.5 8.0 12.2 0.7 4331 chr3R 4408398 intron CG32944 - chr3R 4410564 intron CG32944 - chr3R 4412729 intron CG32944 - chr3R_9_4410001 chr3R_4410001 RAL-321 2231 chr3R 4408411 4408437 chr3R 4412719 4412761 Juan 12 4321 10.5 8.0 9.2 1.2 4350 chr3R 4408411 intron CG32944 - chr3R 4410586 intron CG32944 - chr3R 4412761 intron CG32944 - chr3R_12_4410001 chr3R_4410001 RAL-321 2232 chr3R 4463382 4463421 chr3R 4463478 4463517 14 96 15.5 15.5 15.5 0.8 135 chr3R 4463382 intergenic CG31522 - chr3R 4463450 intergenic not near genes chr3R 4463517 intergenic not near genes chr3R_14_4460001 chr3R_4460001 RAL-321 2233 chr3R 4599299 4599324 chr3R 4599403 4599428 6 104 14.0 18.5 16.2 0.3 129 chr3R 4599299 intron CR44317 - chr3R 4599364 intron CR44317 - chr3R 4599428 intron CR44317 - chr3R_6_4595001 chr3R_4595001 RAL-321 2234 chr3R 4604268 4604284 chr3R 4604416 4604462 5 172 19.0 19.0 19.0 0.2 194 chr3R 4604268 intergenic not near genes chr3R 4604365 intergenic not near genes chr3R 4604462 intergenic not near genes chr3R_5_4600001 chr3R_4600001 RAL-321 2235 chr3R 4609526 4609575 chr3R 4610710 4610759 1360 12 1184 18.0 14.5 16.2 0.7 1233 chr3R 4609526 intergenic not near genes chr3R 4610142 intergenic not near genes chr3R 4610759 intergenic not near genes chr3R_12_4610001 chr3R_4610001 RAL-321 2236 chr3R 4658020 4658066 chr3R 4658123 4658148 11 101 19.0 20.0 19.5 0.5 128 chr3R 4658020 intergenic spartin + chr3R 4658084 intergenic spartin + chr3R 4658148 intergenic spartin + chr3R_11_4655001 chr3R_4655001 RAL-321 2237 chr3R 4683157 4683196 chr3R 4684936 4684975 S-element 7 1775 16.0 12.5 14.2 0.5 1818 chr3R 4683157 intron CG43427 + chr3R 4684066 intron CG43427 + chr3R 4684975 intron CG43427 + chr3R_7_4680001 chr3R_4680001 RAL-321 2238 chr3R 4722327 4722361 chr3R 4722484 4722518 13 157 16.0 25.0 20.5 0.6 191 chr3R 4722327 intron Nep2 - chr3R 4722422 intron Nep2 - chr3R 4722518 intron Nep2 - chr3R_13_4720001 chr3R_4720001 RAL-321 2239 chr3R 4739105 4739122 chr3R 4739202 4739219 6 97 22.5 22.5 22.5 0.3 114 chr3R 4739105 intron tacc - chr3R 4739162 intron tacc - chr3R 4739219 intron tacc - chr3R_6_4735001 chr3R_4735001 RAL-321 2240 chr3R 4739124 4739134 chr3R 4739197 4739231 6 93 22.0 21.5 21.8 0.3 107 chr3R 4739124 intron tacc - chr3R 4739178 intron tacc - chr3R 4739231 intron tacc - chr3R_6_4735001 chr3R_4735001 RAL-321 2241 chr3R 4753225 4753263 chr3R 4757548 4757586 F-element 8 4323 21.5 10.0 15.8 0.5 4361 chr3R 4753225 intron,intron atms +,CG44098 - chr3R 4755406 intron,intron atms +,CG44098 - chr3R 4757586 intron,exon atms +,CG44098 - chr3R_8_4755001 chr3R_4755001 RAL-321 2242 chr3R 4759706 4759746 chr3R 4761223 4761253 hopper2 16 1515 9.5 20.0 14.8 1.0 1547 chr3R 4759706 intron,intron atms +,CG44098 - chr3R 4760480 intron,intron atms +,CG44098 - chr3R 4761253 intron,intron atms +,CG44098 - chr3R_16_4760001 chr3R_4760001 RAL-321 2243 chr3R 4769138 4769188 chr3R 4769236 4769286 15 98 7.5 3.5 5.5 2.3 148 chr3R 4769138 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769286 intron,intron atms +,CG44098 - chr3R_15_4765001 chr3R_4765001 RAL-321 2244 chr3R 4861546 4861590 chr3R 4861647 4861665 8 96 18.5 18.5 18.5 0.4 119 chr3R 4861546 intron opa + chr3R 4861606 intron opa + chr3R 4861665 intron opa + chr3R_8_4860001 chr3R_4860001 RAL-321 2245 chr3R 4887478 4887512 chr3R 4894857 4894899 rover 11 7386 5.0 8.0 6.5 1.5 7421 chr3R 4887478 intergenic not near genes chr3R 4891188 intergenic not near genes chr3R 4894899 intergenic not near genes chr3R_11_4890001 chr3R_4890001 RAL-321 2246 chr3R 4896272 4896323 chr3R 4896385 4896436 4 110 18.0 16.0 17.0 0.2 164 chr3R 4896272 intergenic CR45580 + chr3R 4896354 intergenic CR45580 + chr3R 4896436 5` UTR CR45580 + chr3R_4_4895001 chr3R_4895001 RAL-321 2247 chr3R 4942118 4942159 chr3R 4942234 4942275 14 116 20.0 17.0 18.5 0.7 157 chr3R 4942118 intron Cdep + chr3R 4942196 intron Cdep + chr3R 4942275 intron Cdep + chr3R_14_4940001 chr3R_4940001 RAL-321 2248 chr3R 4948360 4948391 chr3R 4949002 4949033 6 642 36.0 41.0 38.5 0.2 673 chr3R 4948360 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949033 3` UTR UbcD6 - chr3R_6_4945001 chr3R_4945001 RAL-321 2249 chr3R 4965985 4966031 chr3R 4966097 4966143 9 112 23.0 20.0 21.5 0.4 158 chr3R 4965985 intron CG1124 + chr3R 4966064 intron CG1124 + chr3R 4966143 intron CG1124 + chr3R_9_4965001 chr3R_4965001 RAL-321 2250 chr3R 4975912 4975964 chr3R 4976033 4976085 15 121 15.0 16.0 15.5 0.9 173 chr3R 4975912 intergenic not near genes chr3R 4975998 intergenic not near genes chr3R 4976085 intergenic not near genes chr3R_15_4975001 chr3R_4975001 RAL-321 2251 chr3R 5045823 5045876 chr3R 5052945 5052998 HMS-Beagle 23 7122 6.0 6.0 6.0 3.3 7175 chr3R 5045823 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052998 intergenic CR45588 - chr3R_23_5045001 chr3R_5045001 RAL-321 2252 chr3R 5067961 5068014 chr3R 5073498 5073551 mdg3 31 5537 2.5 9.0 5.8 4.6 5590 chr3R 5067961 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073551 intergenic not near genes chr3R_31_5070001 chr3R_5070001 RAL-321 2253 chr3R 5158123 5158172 chr3R 5158236 5158278 9 112 22.5 16.0 19.2 0.4 155 chr3R 5158123 intron dpr16 + chr3R 5158200 intron dpr16 + chr3R 5158278 intron dpr16 + chr3R_9_5155001 chr3R_5155001 RAL-321 2254 chr3R 5191368 5191398 chr3R 5191639 5191669 8 267 31.5 39.5 35.5 0.2 301 chr3R 5191368 intron cno - chr3R 5191518 intron cno - chr3R 5191669 intron cno - chr3R_8_5190001 chr3R_5190001 RAL-321 2255 chr3R 5205126 5205136 chr3R 5205238 5205248 5 112 20.0 17.0 18.5 0.3 122 chr3R 5205126 intron cno - chr3R 5205187 intron cno - chr3R 5205248 intron cno - chr3R_5_5205001 chr3R_5205001 RAL-321 2256 chr3R 5278070 5278120 chr3R 5278171 5278221 12 101 19.5 17.5 18.5 0.6 151 chr3R 5278070 intron mtd - chr3R 5278146 intron mtd - chr3R 5278221 intron mtd - chr3R_12_5275001 chr3R_5275001 RAL-321 2257 chr3R 5337729 5337767 chr3R 5338023 5338053 10 292 12.0 16.0 14.0 0.7 324 chr3R 5337729 intron mtd - chr3R 5337891 intron mtd - chr3R 5338053 intron mtd - chr3R_10_5335001 chr3R_5335001 RAL-321 2258 chr3R 5338383 5338426 chr3R 5343578 5343623 Rt1c 15 5196 6.0 10.5 8.2 1.6 5240 chr3R 5338383 intron mtd - chr3R 5341003 intron mtd - chr3R 5343623 intron mtd - chr3R_15_5340001 chr3R_5340001 RAL-321 2259 chr3R 5365321 5365345 chr3R 5367009 5367033 NOF 8 1688 19.0 25.0 22.0 0.3 1712 chr3R 5365321 intron Cerk - chr3R 5366177 intron Cerk - chr3R 5367033 intron Cerk - chr3R_8_5365001 chr3R_5365001 RAL-321 2260 chr3R 5367133 5367176 chr3R 5367270 5367322 13 144 20.0 20.0 20.0 0.6 189 chr3R 5367133 intron Cerk - chr3R 5367228 intron Cerk - chr3R 5367322 intron Cerk - chr3R_13_5365001 chr3R_5365001 RAL-321 2261 chr3R 5385955 5386007 chr3R 5386146 5386198 8 190 16.5 19.5 18.0 0.4 243 chr3R 5385955 intron kkv - chr3R 5386076 intron kkv - chr3R 5386198 intron kkv - chr3R_8_5385001 chr3R_5385001 RAL-321 2262 chr3R 5445941 5445992 chr3R 5452421 5452427 Burdock 27 6478 7.0 5.5 6.2 3.8 6486 chr3R 5445941 intron CG14669 + chr3R 5449184 intron CG14669 + chr3R 5452427 intron CG14669 + chr3R_27_5445001 chr3R_5445001 RAL-321 2263 chr3R 5502281 5502302 chr3R 5502615 5502636 4 332 11.5 13.5 12.5 0.3 355 chr3R 5502281 exon CG31547 - chr3R 5502458 5` UTR CG31547 - chr3R 5502636 5` UTR CG31547 - chr3R_4_5500001 chr3R_5500001 RAL-321 2264 chr3R 5506824 5506837 chr3R 5506976 5506989 6 152 11.5 5.5 8.5 0.6 165 chr3R 5506824 intergenic not near genes chr3R 5506906 intergenic not near genes chr3R 5506989 intergenic not near genes chr3R_6_5505001 chr3R_5505001 RAL-321 2265 chr3R 5506838 5506869 chr3R 5506975 5507020 14 150 5.0 5.5 5.2 2.3 182 chr3R 5506838 intergenic not near genes chr3R 5506929 intergenic not near genes chr3R 5507020 intergenic not near genes chr3R_14_5505001 chr3R_5505001 RAL-321 2266 chr3R 5627143 5627178 chr3R 5627568 5627609 8 427 13.0 17.0 15.0 0.5 466 chr3R 5627143 intergenic not near genes chr3R 5627376 intergenic CG31551 + chr3R 5627609 intergenic CG31551 + chr3R_8_5625001 chr3R_5625001 RAL-321 2267 chr3R 5696136 5696144 chr3R 5696252 5696260 5 116 16.5 21.0 18.8 0.3 124 chr3R 5696136 intron plx + chr3R 5696198 intron plx + chr3R 5696260 intron plx + chr3R_5_5695001 chr3R_5695001 RAL-321 2268 chr3R 5715620 5715661 chr3R 5715730 5715771 5 106 17.5 16.0 16.8 0.3 151 chr3R 5715620 intron cas - chr3R 5715696 intron cas - chr3R 5715771 exon cas - chr3R_5_5715001 chr3R_5715001 RAL-321 2269 chr3R 5726074 5726124 chr3R 5726256 5726306 20 182 7.0 6.0 6.5 2.7 232 chr3R 5726074 intergenic not near genes chr3R 5726190 intergenic not near genes chr3R 5726306 intergenic not near genes chr3R_20_5725001 chr3R_5725001 RAL-321 2270 chr3R 5727392 5727438 chr3R 5727495 5727541 14 102 22.5 22.0 22.2 0.6 149 chr3R 5727392 intergenic not near genes chr3R 5727466 intergenic not near genes chr3R 5727541 intergenic not near genes chr3R_14_5725001 chr3R_5725001 RAL-321 2271 chr3R 5734635 5734676 chr3R 5734744 5734768 13 105 16.5 19.5 18.0 0.7 133 chr3R 5734635 exon CG1239 + chr3R 5734702 3` UTR,3` UTR CG1239 +,CG2100 - chr3R 5734768 exon CG2100 - chr3R_13_5730001 chr3R_5730001 RAL-321 2272 chr3R 5745995 5746044 chr3R 5746255 5746305 pogo 14 261 3.0 7.5 5.2 2.3 310 chr3R 5745995 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746305 3` UTR Madm + chr3R_14_5745001 chr3R_5745001 RAL-321 2273 chr3R 5746997 5747041 chr3R 5753208 5753252 diver 23 6211 7.0 5.0 6.0 3.3 6255 chr3R 5746997 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753252 intergenic CG2091 - chr3R_23_5750001 chr3R_5750001 RAL-321 2274 chr3R 5772357 5772405 chr3R 5772535 5772583 23 178 11.0 8.0 9.5 2.2 226 chr3R 5772357 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772583 intron CG2082 - chr3R_23_5770001 chr3R_5770001 RAL-321 2275 chr3R 5809093 5809143 chr3R 5809354 5809404 pogo 27 260 6.0 9.5 7.8 3.1 311 chr3R 5809093 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809404 3` UTR CG11000 + chr3R_27_5805001 chr3R_5805001 RAL-321 2276 chr3R 5822362 5822411 chr3R 5823549 5823598 1360 15 1187 6.5 9.5 8.0 1.7 1236 chr3R 5822362 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823598 3` UTR CG2023 - chr3R_15_5820001 chr3R_5820001 RAL-321 2277 chr3R 5860571 5860575 chr3R 5860693 5860698 4 123 12.5 15.5 14.0 0.3 127 chr3R 5860571 intron CG2017 - chr3R 5860634 intron CG2017 - chr3R 5860698 intron CG2017 - chr3R_4_5860001 chr3R_5860001 RAL-321 2278 chr3R 5900767 5900820 chr3R 5900873 5900926 7 105 16.0 17.5 16.8 0.4 159 chr3R 5900767 intron CG34113 - chr3R 5900846 intron CG34113 - chr3R 5900926 intron CG34113 - chr3R_7_5900001 chr3R_5900001 RAL-321 2279 chr3R 5927557 5927586 chr3R 5927803 5927846 pogo 21 259 4.0 9.5 6.8 2.7 289 chr3R 5927557 intron CG34113 - chr3R 5927702 intron CG34113 - chr3R 5927846 intron CG34113 - chr3R_21_5925001 chr3R_5925001 RAL-321 2280 chr3R 5943383 5943411 chr3R 5943482 5943510 8 99 11.5 10.0 10.8 0.7 127 chr3R 5943383 intron CG34113 - chr3R 5943446 intron CG34113 - chr3R 5943510 intron CG34113 - chr3R_8_5940001 chr3R_5940001 RAL-321 2281 chr3R 5947945 5948000 chr3R 5948060 5948079 9 108 13.0 11.5 12.2 0.7 134 chr3R 5947945 intron CG34113 - chr3R 5948012 intron CG34113 - chr3R 5948079 intron CG34113 - chr3R_9_5945001 chr3R_5945001 RAL-321 2282 chr3R 5956548 5956589 chr3R 5956646 5956687 10 94 21.5 22.0 21.8 0.4 139 chr3R 5956548 intron CG34113 - chr3R 5956618 intron CG34113 - chr3R 5956687 intron CG34113 - chr3R_10_5955001 chr3R_5955001 RAL-321 2283 chr3R 5989313 5989366 chr3R 5989416 5989438 16 98 5.0 7.5 6.2 2.2 125 chr3R 5989313 5` UTR CR44927 + chr3R 5989376 5` UTR CR44927 + chr3R 5989438 5` UTR CR44927 + chr3R_16_5985001 chr3R_5985001 RAL-321 2284 chr3R 6015949 6015993 chr3R 6024441 6024477 Tirant 12 8496 4.5 3.5 4.0 2.4 8528 chr3R 6015949 intergenic not near genes chr3R 6020213 intergenic not near genes chr3R 6024477 intergenic not near genes chr3R_12_6020001 chr3R_6020001 RAL-321 2285 chr3R 6029977 6029984 chr3R 6030182 6030205 5 218 4.5 12.0 8.2 0.5 228 chr3R 6029977 intergenic not near genes chr3R 6030091 intergenic not near genes chr3R 6030205 intergenic not near genes chr3R_5_6030001 chr3R_6030001 RAL-321 2286 chr3R 6048432 6048471 chr3R 6048535 6048574 13 103 22.5 22.5 22.5 0.6 142 chr3R 6048432 intergenic not near genes chr3R 6048503 intergenic not near genes chr3R 6048574 intergenic not near genes chr3R_13_6045001 chr3R_6045001 RAL-321 2287 chr3R 6109490 6109530 chr3R 6109636 6109676 9 146 17.5 20.0 18.8 0.5 186 chr3R 6109490 exon Obp83cd + chr3R 6109583 exon Obp83cd + chr3R 6109676 3` UTR,3` UTR Obp83cd +,Obp83ef - chr3R_9_6105001 chr3R_6105001 RAL-321 2288 chr3R 6117392 6117432 chr3R 6117533 6117553 7 134 17.0 19.0 18.0 0.4 161 chr3R 6117392 intergenic not near genes chr3R 6117472 intergenic not near genes chr3R 6117553 intergenic not near genes chr3R_7_6115001 chr3R_6115001 RAL-321 2289 chr3R 6121164 6121181 chr3R 6121402 6121419 BS 4 238 0.0 12.0 6.0 0.6 255 chr3R 6121164 intergenic not near genes chr3R 6121292 intergenic not near genes chr3R 6121419 intergenic not near genes chr3R_4_6120001 chr3R_6120001 RAL-321 2290 chr3R 6158496 6158539 chr3R 6167098 6167142 Tirant 13 8597 9.0 9.0 9.0 1.3 8646 chr3R 6158496 intergenic not near genes chr3R 6162819 intergenic not near genes chr3R 6167142 intergenic CG1077 + chr3R_13_6160001 chr3R_6160001 RAL-321 2291 chr3R 6171129 6171178 chr3R 6171511 6171560 8 382 20.5 10.0 15.2 0.5 431 chr3R 6171129 intergenic not near genes chr3R 6171344 intergenic not near genes chr3R 6171560 intergenic not near genes chr3R_8_6170001 chr3R_6170001 RAL-321 2292 chr3R 6175151 6175207 chr3R 6182443 6182484 HMS-Beagle2 29 7287 5.5 9.5 7.5 3.4 7333 chr3R 6175151 intergenic Osi1 + chr3R 6178818 intron CR45194 + chr3R 6182484 intergenic CR45194 + chr3R_29_6175001 chr3R_6175001 RAL-321 2293 chr3R 6188886 6188932 chr3R 6188983 6189029 10 95 17.0 21.0 19.0 0.5 143 chr3R 6188886 intron NPFR + chr3R 6188958 intron NPFR + chr3R 6189029 5` UTR NPFR + chr3R_10_6185001 chr3R_6185001 RAL-321 2294 chr3R 6191150 6191199 chr3R 6191250 6191299 10 98 20.0 20.5 20.2 0.5 149 chr3R 6191150 intron NPFR + chr3R 6191224 intron NPFR + chr3R 6191299 intron NPFR + chr3R_10_6190001 chr3R_6190001 RAL-321 2295 chr3R 6334776 6334809 chr3R 6334888 6334927 20 117 2.5 7.0 4.8 3.4 151 chr3R 6334776 intergenic not near genes chr3R 6334852 intergenic not near genes chr3R 6334927 intergenic Osi19 + chr3R_20_6330001 chr3R_6330001 RAL-321 2296 chr3R 6421102 6421139 chr3R 6421271 6421323 5 173 10.5 17.0 13.8 0.3 221 chr3R 6421102 intron gpp + chr3R 6421212 intron gpp + chr3R 6421323 intron gpp + chr3R_5_6420001 chr3R_6420001 RAL-321 2297 chr3R 6428788 6428828 chr3R 6428910 6428950 12 122 25.5 16.5 21.0 0.5 162 chr3R 6428788 intron gpp + chr3R 6428869 intron gpp + chr3R 6428950 intron gpp + chr3R_12_6425001 chr3R_6425001 RAL-321 2298 chr3R 6461557 6461612 chr3R 6461658 6461712 13 100 20.5 23.0 21.8 0.6 155 chr3R 6461557 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461712 intergenic not near genes chr3R_13_6460001 chr3R_6460001 RAL-321 2299 chr3R 6510017 6510038 chr3R 6515108 6515139 jockey 9 5100 8.5 7.5 8.0 1.0 5122 chr3R 6510017 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515139 intergenic not near genes chr3R_9_6510001 chr3R_6510001 RAL-321 2300 chr3R 6578861 6578915 chr3R 6579001 6579055 10 136 14.5 18.5 16.5 0.6 194 chr3R 6578861 intron dpr11 - chr3R 6578958 intron dpr11 - chr3R 6579055 intron dpr11 - chr3R_10_6575001 chr3R_6575001 RAL-321 2301 chr3R 6689319 6689371 chr3R 6689421 6689473 9 100 7.5 13.0 10.2 0.8 154 chr3R 6689319 intergenic Ccp84Af - chr3R 6689396 intergenic Ccp84Af - chr3R 6689473 intergenic Ccp84Af - chr3R_9_6685001 chr3R_6685001 RAL-321 2302 chr3R 6705669 6705714 chr3R 6705913 6705958 14 244 12.5 15.0 13.8 0.9 289 chr3R 6705669 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705958 intergenic not near genes chr3R_14_6705001 chr3R_6705001 RAL-321 2303 chr3R 6737499 6737525 chr3R 6739285 6739332 Doc 12 1803 4.0 4.0 4.0 2.4 1833 chr3R 6737499 intron pb - chr3R 6738416 intron pb - chr3R 6739332 intron pb - chr3R_12_6735001 chr3R_6735001 RAL-321 2304 chr3R 6804179 6804209 chr3R 6804308 6804338 11 129 22.0 20.5 21.2 0.5 159 chr3R 6804179 intergenic not near genes chr3R 6804258 intergenic not near genes chr3R 6804338 intergenic not near genes chr3R_11_6800001 chr3R_6800001 RAL-321 2305 chr3R 6828009 6828039 chr3R 6828105 6828135 9 94 14.0 17.0 15.5 0.5 126 chr3R 6828009 intron Scr - chr3R 6828072 intron Scr - chr3R 6828135 intron Scr - chr3R_9_6825001 chr3R_6825001 RAL-321 2306 chr3R 6842759 6842811 chr3R 6842862 6842881 12 100 13.0 8.0 10.5 1.0 122 chr3R 6842759 intron Scr - chr3R 6842820 intron Scr - chr3R 6842881 intron Scr - chr3R_12_6840001 chr3R_6840001 RAL-321 2307 chr3R 6856366 6856395 chr3R 6856500 6856532 9 136 12.5 12.5 12.5 0.7 166 chr3R 6856366 intergenic not near genes chr3R 6856449 intergenic not near genes chr3R 6856532 intergenic not near genes chr3R_9_6855001 chr3R_6855001 RAL-321 2308 chr3R 6885892 6885936 chr3R 6886001 6886045 13 108 12.5 15.0 13.8 0.9 153 chr3R 6885892 intergenic not near genes chr3R 6885968 intergenic not near genes chr3R 6886045 intergenic not near genes chr3R_13_6885001 chr3R_6885001 RAL-321 2309 chr3R 6891216 6891262 chr3R 6891312 6891352 10 94 5.5 4.5 5.0 1.7 136 chr3R 6891216 intergenic not near genes chr3R 6891284 intergenic not near genes chr3R 6891352 intergenic not near genes chr3R_10_6890001 chr3R_6890001 RAL-321 2310 chr3R 6918044 6918092 chr3R 6918142 6918190 8 98 14.5 16.5 15.5 0.5 146 chr3R 6918044 intron Antp - chr3R 6918117 intron Antp - chr3R 6918190 intron Antp - chr3R_8_6915001 chr3R_6915001 RAL-321 2311 chr3R 6978862 6978912 chr3R 6978967 6979017 22 104 4.0 5.5 4.8 3.8 155 chr3R 6978862 intron Antp - chr3R 6978940 intron Antp - chr3R 6979017 intron Antp - chr3R_22_6975001 chr3R_6975001 RAL-321 2312 chr3R 6987390 6987431 chr3R 6987493 6987534 11 103 18.0 15.0 16.5 0.6 144 chr3R 6987390 intron Antp - chr3R 6987462 intron Antp - chr3R 6987534 intron Antp - chr3R_11_6985001 chr3R_6985001 RAL-321 2313 chr3R 7092775 7092815 chr3R 7093348 7093399 33 580 6.5 7.0 6.8 4.2 624 chr3R 7092775 3` UTR CR43685 - chr3R 7093087 intron CR43685 - chr3R 7093399 3` UTR CR43685 - chr3R_33_7090001 chr3R_7090001 RAL-321 2314 chr3R 7103267 7103313 chr3R 7103360 7103407 20 93 6.0 4.5 5.2 3.2 140 chr3R 7103267 intron Alh - chr3R 7103337 intron Alh - chr3R 7103407 intron Alh - chr3R_20_7100001 chr3R_7100001 RAL-321 2315 chr3R 7105300 7105349 chr3R 7105403 7105452 11 100 18.0 20.5 19.2 0.5 152 chr3R 7105300 intron Alh - chr3R 7105376 intron Alh - chr3R 7105452 intron Alh - chr3R_11_7105001 chr3R_7105001 RAL-321 2316 chr3R 7106508 7106536 chr3R 7106609 7106637 11 101 15.0 19.0 17.0 0.6 129 chr3R 7106508 intron Alh - chr3R 7106572 intron Alh - chr3R 7106637 intron Alh - chr3R_11_7105001 chr3R_7105001 RAL-321 2317 chr3R 7106742 7106791 chr3R 7107055 7107099 6 307 21.0 3.0 12.0 0.5 357 chr3R 7106742 intron Alh - chr3R 7106920 intron Alh - chr3R 7107099 intron Alh - chr3R_6_7105001 chr3R_7105001 RAL-321 2318 chr3R 7121724 7121737 chr3R 7121827 7121840 6 103 6.5 8.0 7.2 0.7 116 chr3R 7121724 exon Alh - chr3R 7121782 intron Alh - chr3R 7121840 intron Alh - chr3R_6_7120001 chr3R_7120001 RAL-321 2319 chr3R 7126484 7126533 chr3R 7126599 7126648 26 115 8.5 6.5 7.5 3.1 164 chr3R 7126484 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126648 3` UTR CG10068 - chr3R_26_7125001 chr3R_7125001 RAL-321 2320 chr3R 7132821 7132872 chr3R 7132932 7132983 14 110 23.0 25.0 24.0 0.6 162 chr3R 7132821 intergenic CG31493 + chr3R 7132902 intergenic CG31493 + chr3R 7132983 intergenic CG31493 + chr3R_14_7130001 chr3R_7130001 RAL-321 2321 chr3R 7173661 7173707 chr3R 7173761 7173807 24 100 6.0 9.5 7.8 2.7 146 chr3R 7173661 intron sas + chr3R 7173734 intron sas + chr3R 7173807 intron sas + chr3R_24_7170001 chr3R_7170001 RAL-321 2322 chr3R 7217445 7217487 chr3R 7217686 7217728 28 240 7.0 10.5 8.8 2.9 283 chr3R 7217445 intergenic CG14605 -,CG14606 - chr3R 7217586 intergenic CG14605 - chr3R 7217728 3` UTR CG14605 - chr3R_28_7215001 chr3R_7215001 RAL-321 2323 chr3R 7269894 7269937 chr3R 7270008 7270051 6 114 20.5 17.5 19.0 0.3 157 chr3R 7269894 3` UTR Syt4 + chr3R 7269972 3` UTR Syt4 + chr3R 7270051 3` UTR Syt4 + chr3R_6_7265001 chr3R_7265001 RAL-321 2324 chr3R 7302280 7302326 chr3R 7302392 7302427 8 109 17.0 19.0 18.0 0.4 147 chr3R 7302280 intron rn - chr3R 7302354 intron rn - chr3R 7302427 intron rn - chr3R_8_7300001 chr3R_7300001 RAL-321 2325 chr3R 7404947 7404970 chr3R 7405034 7405066 7 95 0.5 9.0 4.8 1.2 119 chr3R 7404947 intergenic not near genes chr3R 7405006 intergenic not near genes chr3R 7405066 intergenic not near genes chr3R_7_7405001 chr3R_7405001 RAL-321 2326 chr3R 7457747 7457799 chr3R 7457866 7457920 10 119 21.0 23.5 22.2 0.4 173 chr3R 7457747 intergenic not near genes chr3R 7457834 intergenic not near genes chr3R 7457920 intergenic not near genes chr3R_10_7455001 chr3R_7455001 RAL-321 2327 chr3R 7481828 7481866 chr3R 7481916 7481935 7 81 17.0 17.5 17.2 0.4 107 chr3R 7481828 intergenic not near genes chr3R 7481882 intergenic not near genes chr3R 7481935 intergenic not near genes chr3R_7_7480001 chr3R_7480001 RAL-321 2328 chr3R 7492579 7492629 chr3R 7492676 7492726 8 96 17.5 20.0 18.8 0.4 147 chr3R 7492579 intron alpha-Est10 - chr3R 7492652 intron alpha-Est10 - chr3R 7492726 intron alpha-Est10 - chr3R_8_7490001 chr3R_7490001 RAL-321 2329 chr3R 7542453 7542471 chr3R 7542550 7542568 6 97 5.0 5.0 5.0 1.0 115 chr3R 7542453 intron alpha-Est2 + chr3R 7542510 intron alpha-Est2 + chr3R 7542568 intron alpha-Est2 + chr3R_6_7540001 chr3R_7540001 RAL-321 2330 chr3R 7548588 7548614 chr3R 7548686 7548713 5 99 28.5 23.0 25.8 0.2 125 chr3R 7548588 intron alpha-Est1 - chr3R 7548650 intron alpha-Est1 - chr3R 7548713 intron alpha-Est1 - chr3R_5_7545001 chr3R_7545001 RAL-321 2331 chr3R 7552952 7552996 chr3R 7553060 7553104 11 107 18.0 20.5 19.2 0.5 152 chr3R 7552952 intergenic not near genes chr3R 7553028 intergenic not near genes chr3R 7553104 intergenic not near genes chr3R_11_7550001 chr3R_7550001 RAL-321 2332 chr3R 7556920 7556960 chr3R 7557033 7557073 13 113 11.0 16.0 13.5 0.9 153 chr3R 7556920 intergenic not near genes chr3R 7556996 intergenic not near genes chr3R 7557073 intergenic not near genes chr3R_13_7555001 chr3R_7555001 RAL-321 2333 chr3R 7621526 7621560 chr3R 7621637 7621670 5 110 16.0 19.5 17.8 0.3 144 chr3R 7621526 intron CG34127 - chr3R 7621598 intron CG34127 - chr3R 7621670 intron CG34127 - chr3R_5_7620001 chr3R_7620001 RAL-321 2334 chr3R 7625280 7625320 chr3R 7625748 7625788 11 468 17.0 21.5 19.2 0.5 508 chr3R 7625280 intron CG34127 - chr3R 7625534 intron CG34127 - chr3R 7625788 intron CG34127 - chr3R_11_7625001 chr3R_7625001 RAL-321 2335 chr3R 7635637 7635682 chr3R 7635740 7635785 13 102 14.5 18.0 16.2 0.8 148 chr3R 7635637 intron CG34127 - chr3R 7635711 intron CG34127 - chr3R 7635785 intron CG34127 - chr3R_13_7635001 chr3R_7635001 RAL-321 2336 chr3R 7654994 7655031 chr3R 7655086 7655128 9 99 13.5 14.5 14.0 0.6 134 chr3R 7654994 intergenic not near genes chr3R 7655061 intergenic not near genes chr3R 7655128 intergenic not near genes chr3R_9_7655001 chr3R_7655001 RAL-321 2337 chr3R 7677894 7677942 chr3R 7678027 7678049 12 130 13.0 14.0 13.5 0.8 155 chr3R 7677894 intron Nlg1 + chr3R 7677972 intron Nlg1 + chr3R 7678049 intron Nlg1 + chr3R_12_7675001 chr3R_7675001 RAL-321 2338 chr3R 7690329 7690380 chr3R 7690429 7690480 15 98 16.0 14.0 15.0 0.9 151 chr3R 7690329 intron Nlg1 + chr3R 7690404 intron Nlg1 + chr3R 7690480 intron Nlg1 + chr3R_15_7690001 chr3R_7690001 RAL-321 2339 chr3R 7694558 7694610 chr3R 7713639 7713691 invader3 25 19081 5.5 5.0 5.2 4.0 19133 chr3R 7694558 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713691 intergenic not near genes chr3R_25_7700001 chr3R_7700001 RAL-321 2340 chr3R 7724422 7724469 chr3R 7724531 7724579 4 106 14.0 19.0 16.5 0.2 157 chr3R 7724422 3` UTR CG2616 + chr3R 7724500 3` UTR CG2616 + chr3R 7724579 3` UTR CG2616 + chr3R_4_7720001 chr3R_7720001 RAL-321 2341 chr3R 7729446 7729496 chr3R 7737404 7737454 Stalker2 28 7956 6.5 5.0 5.8 4.1 8008 chr3R 7729446 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737454 intergenic not near genes chr3R_28_7730001 chr3R_7730001 RAL-321 2342 chr3R 7744912 7744965 chr3R 7745197 7745204 5 267 18.5 9.5 14.0 0.3 292 chr3R 7744912 intergenic not near genes chr3R 7745058 intergenic not near genes chr3R 7745204 intergenic not near genes chr3R_5_7745001 chr3R_7745001 RAL-321 2343 chr3R 7760238 7760284 chr3R 7760767 7760795 10 527 17.5 17.5 17.5 0.5 557 chr3R 7760238 intron Sp7 + chr3R 7760516 intron Sp7 + chr3R 7760795 5` UTR Sp7 + chr3R_10_7760001 chr3R_7760001 RAL-321 2344 chr3R 7821698 7821745 chr3R 7821814 7821861 12 116 13.5 13.5 13.5 0.8 163 chr3R 7821698 intron CG34384 + chr3R 7821780 intron CG34384 + chr3R 7821861 intron CG34384 + chr3R_12_7820001 chr3R_7820001 RAL-321 2345 chr3R 7830308 7830327 chr3R 7830454 7830498 6 154 15.5 13.0 14.2 0.4 190 chr3R 7830308 intron CG34384 + chr3R 7830403 intron CG34384 + chr3R 7830498 intron CG34384 + chr3R_6_7830001 chr3R_7830001 RAL-321 2346 chr3R 7849645 7849673 chr3R 7850832 7850860 1360 10 1187 14.0 24.5 19.2 0.5 1215 chr3R 7849645 intron CG34384 + chr3R 7850252 intron CG34384 + chr3R 7850860 intron CG34384 + chr3R_10_7850001 chr3R_7850001 RAL-321 2347 chr3R 7951444 7951488 chr3R 7951562 7951607 16 118 16.5 22.0 19.2 0.8 163 chr3R 7951444 intron dsx - chr3R 7951526 intron dsx - chr3R 7951607 intron dsx - chr3R_16_7950001 chr3R_7950001 RAL-321 2348 chr3R 7973300 7973340 chr3R 7974382 7974422 1360 14 1081 6.0 7.5 6.8 1.8 1122 chr3R 7973300 intergenic not near genes chr3R 7973861 intergenic not near genes chr3R 7974422 3` UTR CD98hc - chr3R_14_7970001 chr3R_7970001 RAL-321 2349 chr3R 7987166 7987205 chr3R 7987275 7987314 8 109 20.0 18.0 19.0 0.4 148 chr3R 7987166 intron CG2781 - chr3R 7987240 intron CG2781 - chr3R 7987314 intron CG2781 - chr3R_8_7985001 chr3R_7985001 RAL-321 2350 chr3R 8049031 8049064 chr3R 8049625 8049658 10 594 12.5 12.5 12.5 0.7 627 chr3R 8049031 intron CG43060 + chr3R 8049344 intron,intron CG43060 +,CG43618 + chr3R 8049658 intron CG43060 + chr3R_10_8045001 chr3R_8045001 RAL-321 2351 chr3R 8049379 8049396 chr3R 8049587 8049604 5 208 1.5 7.0 4.2 1.0 225 chr3R 8049379 intron,exon CG43060 +,CG43618 + chr3R 8049492 intron CG43060 + chr3R 8049604 intron CG43060 + chr3R_5_8045001 chr3R_8045001 RAL-321 2352 chr3R 8090257 8090298 chr3R 8090454 8090495 9 197 21.5 24.0 22.8 0.4 238 chr3R 8090257 5` UTR CR44330 + chr3R 8090376 intergenic CR44330 + chr3R 8090495 intergenic CR44330 + chr3R_9_8090001 chr3R_8090001 RAL-321 2353 chr3R 8090546 8090563 chr3R 8094044 8094061 297 8 3496 4.5 10.0 7.2 1.0 3515 chr3R 8090546 intergenic CR44330 + chr3R 8092304 intergenic not near genes chr3R 8094061 intergenic CG7900 + chr3R_8_8090001 chr3R_8090001 RAL-321 2354 chr3R 8094394 8094436 chr3R 8099719 8099761 Transpac 23 5325 9.5 5.5 7.5 2.7 5367 chr3R 8094394 intron CG7900 + chr3R 8097078 intron CG7900 + chr3R 8099761 intron CG7900 + chr3R_23_8095001 chr3R_8095001 RAL-321 2355 chr3R 8101742 8101786 chr3R 8104846 8104890 G2 20 3102 4.0 6.0 5.0 3.3 3148 chr3R 8101742 exon CG7900 + chr3R 8103316 intron CG7900 + chr3R 8104890 3` UTR CG7900 + chr3R_20_8100001 chr3R_8100001 RAL-321 2356 chr3R 8107370 8107417 chr3R 8107524 8107571 11 154 15.0 16.0 15.5 0.7 201 chr3R 8107370 intron puc + chr3R 8107470 intron puc + chr3R 8107571 intron puc + chr3R_11_8105001 chr3R_8105001 RAL-321 2357 chr3R 8157410 8157463 chr3R 8157580 8157618 8 168 10.0 14.0 12.0 0.6 208 chr3R 8157410 intron grn - chr3R 8157514 intron grn - chr3R 8157618 intron grn - chr3R_8_8155001 chr3R_8155001 RAL-321 2358 chr3R 8182631 8182681 chr3R 8182745 8182795 10 108 23.5 24.5 24.0 0.4 164 chr3R 8182631 intergenic not near genes chr3R 8182713 intergenic not near genes chr3R 8182795 intergenic not near genes chr3R_10_8180001 chr3R_8180001 RAL-321 2359 chr3R 8188365 8188526 chr3R 8188470 8188637 18 109 14.5 14.0 14.2 1.2 272 chr3R 8188365 intergenic not near genes chr3R 8188501 intergenic not near genes chr3R 8188637 intergenic not near genes chr3R_18_8185001 chr3R_8185001 RAL-321 2360 chr3R 8207545 8207587 chr3R 8208410 8208429 F-element 10 858 5.5 6.5 6.0 1.4 884 chr3R 8207545 intergenic not near genes chr3R 8207987 intergenic not near genes chr3R 8208429 intergenic not near genes chr3R_10_8205001 chr3R_8205001 RAL-321 2361 chr3R 8261887 8261923 chr3R 8262138 8262180 15 251 48.0 37.5 42.8 0.3 293 chr3R 8261887 intergenic RpA-70 - chr3R 8262034 intergenic RpA-70 - chr3R 8262180 3` UTR RpA-70 - chr3R_15_8260001 chr3R_8260001 RAL-321 2362 chr3R 8293976 8294016 chr3R 8294174 8294214 11 196 11.0 14.0 12.5 0.8 238 chr3R 8293976 3` UTR CG9626 - chr3R 8294095 3` UTR CG9626 - chr3R 8294214 exon CG9626 - chr3R_11_8290001 chr3R_8290001 RAL-321 2363 chr3R 8303554 8303605 chr3R 8305316 8305351 9 1757 30.0 37.0 33.5 0.3 1797 chr3R 8303554 exon nac - chr3R 8304452 3` UTR Sgt1 - chr3R 8305351 intergenic Sgt1 - chr3R_9_8300001 chr3R_8300001 RAL-321 2364 chr3R 8305089 8305138 chr3R 8305202 8305252 17 112 16.5 15.5 16.0 1.0 163 chr3R 8305089 exon Sgt1 - chr3R 8305170 5` UTR Sgt1 - chr3R 8305252 5` UTR Sgt1 - chr3R_17_8305001 chr3R_8305001 RAL-321 2365 chr3R 8303188 8303227 chr3R 8305403 8305442 10 2216 38.0 41.0 39.5 0.2 2254 chr3R 8303188 exon nac - chr3R 8304315 3` UTR Sgt1 - chr3R 8305442 intergenic Sgt1 - chr3R_10_8300001 chr3R_8300001 RAL-321 2366 chr3R 8339246 8339247 chr3R 21907534 21907536 12 13568289 28.0 30.0 29.0 0.4 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_12_15120001 chr3R_15120001 RAL-321 2367 chr3R 8374145 8374168 chr3R 8374280 8374303 6 132 14.5 7.5 11.0 0.5 158 chr3R 8374145 intron CG45263 - chr3R 8374224 intron CG45263 - chr3R 8374303 intron CG45263 - chr3R_6_8370001 chr3R_8370001 RAL-321 2368 chr3R 8376370 8376420 chr3R 8376747 8376797 13 377 39.5 27.0 33.2 0.4 427 chr3R 8376370 intron CG45263 - chr3R 8376584 intron CG45263 - chr3R 8376797 intron CG45263 - chr3R_13_8375001 chr3R_8375001 RAL-321 2369 chr3R 8393593 8393602 chr3R 8393662 8393706 6 95 17.5 21.5 19.5 0.3 113 chr3R 8393593 intron CG45263 - chr3R 8393650 intron CG45263 - chr3R 8393706 intron CG45263 - chr3R_6_8390001 chr3R_8390001 RAL-321 2370 chr3R 8402990 8403037 chr3R 8412176 8412215 roo 23 9183 7.5 6.0 6.8 2.9 9225 chr3R 8402990 intron CG45263 - chr3R 8407602 intron CG45263 - chr3R 8412215 intron CG45263 - chr3R_23_8405001 chr3R_8405001 RAL-321 2371 chr3R 8418651 8418697 chr3R 8418775 8418791 7 116 23.0 17.5 20.2 0.3 140 chr3R 8418651 intron CG45263 - chr3R 8418721 intron CG45263 - chr3R 8418791 intron CG45263 - chr3R_7_8415001 chr3R_8415001 RAL-321 2372 chr3R 8478067 8478108 chr3R 8478167 8478208 11 100 20.0 20.5 20.2 0.5 141 chr3R 8478067 intergenic CG45263 - chr3R 8478138 intergenic not near genes chr3R 8478208 intergenic not near genes chr3R_11_8475001 chr3R_8475001 RAL-321 2373 chr3R 8541328 8541362 chr3R 8541424 8541463 8 98 18.0 13.0 15.5 0.5 135 chr3R 8541328 intergenic not near genes chr3R 8541396 intergenic not near genes chr3R 8541463 intergenic not near genes chr3R_8_8540001 chr3R_8540001 RAL-321 2374 chr3R 8570457 8570463 chr3R 8575143 8575149 HMS-Beagle 4 4686 1.0 8.0 4.5 0.7 4692 chr3R 8570457 intergenic not near genes chr3R 8572803 intergenic not near genes chr3R 8575149 intergenic not near genes chr3R_4_8570001 chr3R_8570001 RAL-321 2375 chr3R 8570478 8570493 chr3R 8575131 8575133 HMS-Beagle 5 4655 1.0 5.5 3.2 1.2 4655 chr3R 8570478 intergenic not near genes chr3R 8572806 intergenic not near genes chr3R 8575133 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RAL-321 2376 chr3R 8570497 8570507 chr3R 8575128 8575193 HMS-Beagle 10 4661 1.0 5.5 3.2 2.4 4696 chr3R 8570497 intergenic not near genes chr3R 8572845 intergenic not near genes chr3R 8575193 intergenic not near genes chr3R_10_8570001 chr3R_8570001 RAL-321 2377 chr3R 8601770 8601800 chr3R 8610920 8610963 roo 14 9168 9.5 8.0 8.8 1.4 9193 chr3R 8601770 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8610963 intron 5-HT2B + chr3R_14_8605001 chr3R_8605001 RAL-321 2378 chr3R 8614804 8614808 chr3R 8614991 8615031 8 214 9.0 15.5 12.2 0.6 227 chr3R 8614804 intron 5-HT2B + chr3R 8614918 intron 5-HT2B + chr3R 8615031 intron 5-HT2B + chr3R_8_8610001 chr3R_8610001 RAL-321 2379 chr3R 8636917 8636962 chr3R 8637240 8637250 11 317 19.5 25.5 22.5 0.5 333 chr3R 8636917 intergenic not near genes chr3R 8637084 intergenic not near genes chr3R 8637250 intergenic not near genes chr3R_11_8635001 chr3R_8635001 RAL-321 2380 chr3R 8685279 8685315 chr3R 8685397 8685435 10 118 16.5 14.5 15.5 0.6 156 chr3R 8685279 intron CR44937 - chr3R 8685357 intron CR44937 - chr3R 8685435 intron CR44937 - chr3R_10_8685001 chr3R_8685001 RAL-321 2381 chr3R 8690253 8690299 chr3R 8690359 8690394 8 97 17.0 16.0 16.5 0.5 141 chr3R 8690253 intergenic not near genes chr3R 8690324 intergenic not near genes chr3R 8690394 intergenic not near genes chr3R_8_8690001 chr3R_8690001 RAL-321 2382 chr3R 8707337 8707381 chr3R 8709798 8709842 jockey 13 2460 6.0 7.0 6.5 1.7 2505 chr3R 8707337 intergenic not near genes chr3R 8708590 intergenic not near genes chr3R 8709842 intergenic not near genes chr3R_13_8705001 chr3R_8705001 RAL-321 2383 chr3R 8740226 8740274 chr3R 8740335 8740356 7 98 18.5 20.0 19.2 0.3 130 chr3R 8740226 intron CG9801 - chr3R 8740291 intron CG9801 - chr3R 8740356 intron CG9801 - chr3R_7_8740001 chr3R_8740001 RAL-321 2384 chr3R 8745728 8745778 chr3R 8745859 8745909 8 130 20.5 19.0 19.8 0.4 181 chr3R 8745728 intron CG9801 - chr3R 8745818 intron CG9801 - chr3R 8745909 intron CG9801 - chr3R_8_8745001 chr3R_8745001 RAL-321 2385 chr3R 8756282 8756317 chr3R 8756378 8756413 12 96 26.0 24.0 25.0 0.5 131 chr3R 8756282 intron,intron CG11768 -,CG34135 - chr3R 8756348 intron,intron CG11768 -,CG34135 - chr3R 8756413 intron,intron CG11768 -,CG34135 - chr3R_12_8755001 chr3R_8755001 RAL-321 2386 chr3R 8784040 8784051 chr3R 8784137 8784148 4 96 18.0 15.5 16.8 0.2 108 chr3R 8784040 exon,5` UTR Pif1A -,Pif1B - chr3R 8784094 exon,5` UTR Pif1A -,Pif1B - chr3R 8784148 exon,5` UTR Pif1A -,Pif1B - chr3R_4_8780001 chr3R_8780001 RAL-321 2387 chr3R 8798630 8798686 chr3R 8798733 8798789 12 99 21.5 21.5 21.5 0.5 159 chr3R 8798630 intron,intron Pif1A -,Pif1B - chr3R 8798710 intron,intron Pif1A -,Pif1B - chr3R 8798789 intron,intron Pif1A -,Pif1B - chr3R_12_8795001 chr3R_8795001 RAL-321 2388 chr3R 8875523 8875571 chr3R 8875620 8875668 6 96 12.0 14.0 13.0 0.4 145 chr3R 8875523 intron pyd - chr3R 8875596 intron pyd - chr3R 8875668 intron pyd - chr3R_6_8875001 chr3R_8875001 RAL-321 2389 chr3R 8877158 8877166 chr3R 8877259 8877267 6 101 23.0 16.0 19.5 0.3 109 chr3R 8877158 intron pyd - chr3R 8877212 intron pyd - chr3R 8877267 intron pyd - chr3R_6_8875001 chr3R_8875001 RAL-321 2390 chr3R 8877168 8877208 chr3R 8877258 8877305 11 96 17.0 16.0 16.5 0.6 137 chr3R 8877168 intron pyd - chr3R 8877236 intron pyd - chr3R 8877305 intron pyd - chr3R_11_8875001 chr3R_8875001 RAL-321 2391 chr3R 8894854 8894902 chr3R 8896030 8896078 1360 12 1176 11.5 16.5 14.0 0.8 1224 chr3R 8894854 intron pyd - chr3R 8895466 intron pyd - chr3R 8896078 intron pyd - chr3R_12_8895001 chr3R_8895001 RAL-321 2392 chr3R 8898200 8898213 chr3R 8913802 8913805 297 5 15598 16.0 5.5 10.8 0.4 15605 chr3R 8898200 intron pyd - chr3R 8906002 intron pyd - chr3R 8913805 intron pyd - chr3R_5_8905001 chr3R_8905001 RAL-321 2393 chr3R 8917871 8917912 chr3R 8917971 8918012 12 99 17.5 16.5 17.0 0.7 141 chr3R 8917871 intron pyd - chr3R 8917942 intron pyd - chr3R 8918012 intron pyd - chr3R_12_8915001 chr3R_8915001 RAL-321 2394 chr3R 8962678 8962726 chr3R 8962788 8962836 22 110 18.0 20.0 19.0 1.1 158 chr3R 8962678 5` UTR CG11966 - chr3R 8962757 5` UTR CG11966 - chr3R 8962836 5` UTR CG11966 - chr3R_22_8960001 chr3R_8960001 RAL-321 2395 chr3R 8997356 8997392 chr3R 8997466 8997502 8 109 19.5 17.0 18.2 0.4 146 chr3R 8997356 intron CG31100 - chr3R 8997429 intron CG31100 - chr3R 8997502 intron CG31100 - chr3R_8_8995001 chr3R_8995001 RAL-321 2396 chr3R 9036355 9036400 chr3R 9036453 9036498 10 98 18.0 19.0 18.5 0.5 143 chr3R 9036355 intron neur - chr3R 9036426 intron neur - chr3R 9036498 intron neur - chr3R_10_9035001 chr3R_9035001 RAL-321 2397 chr3R 9036693 9036738 chr3R 9036809 9036854 14 116 19.0 19.0 19.0 0.7 161 chr3R 9036693 intron neur - chr3R 9036774 intron neur - chr3R 9036854 intron neur - chr3R_14_9035001 chr3R_9035001 RAL-321 2398 chr3R 9083132 9083172 chr3R 9083237 9083246 14 99 7.5 13.0 10.2 1.2 114 chr3R 9083132 intron pum - chr3R 9083189 intron pum - chr3R 9083246 intron pum - chr3R_14_9080001 chr3R_9080001 RAL-321 2399 chr3R 9101825 9101867 chr3R 9101942 9101985 11 117 25.5 21.5 23.5 0.4 160 chr3R 9101825 intron pum - chr3R 9101905 intron pum - chr3R 9101985 intron pum - chr3R_11_9100001 chr3R_9100001 RAL-321 2400 chr3R 9108846 9108884 chr3R 9108942 9108980 18 96 13.0 5.0 9.0 1.8 134 chr3R 9108846 intron pum - chr3R 9108913 intron pum - chr3R 9108980 intron pum - chr3R_18_9105001 chr3R_9105001 RAL-321 2401 chr3R 9149440 9149459 chr3R 9149540 9149559 8 100 21.5 12.0 16.8 0.4 119 chr3R 9149440 intron pum - chr3R 9149500 intron pum - chr3R 9149559 intron pum - chr3R_8_9145001 chr3R_9145001 RAL-321 2402 chr3R 9179477 9179518 chr3R 9181145 9181186 11 1668 12.5 13.5 13.0 0.8 1709 chr3R 9179477 intron pum - chr3R 9180332 intron pum - chr3R 9181186 intron pum - chr3R_11_9180001 chr3R_9180001 RAL-321 2403 chr3R 9278771 9278808 chr3R 9284044 9284088 Rt1a 20 5278 6.0 7.0 6.5 2.7 5317 chr3R 9278771 intergenic not near genes chr3R 9281430 intergenic not near genes chr3R 9284088 intergenic not near genes chr3R_20_9280001 chr3R_9280001 RAL-321 2404 chr3R 9284332 9284373 chr3R 9284448 9284490 17 117 11.5 12.0 11.8 1.3 158 chr3R 9284332 intergenic not near genes chr3R 9284411 intergenic not near genes chr3R 9284490 intergenic not near genes chr3R_17_9280001 chr3R_9280001 RAL-321 2405 chr3R 9289152 9289187 chr3R 9289422 9289472 11 277 11.5 11.0 11.2 0.9 320 chr3R 9289152 intergenic not near genes chr3R 9289312 intergenic not near genes chr3R 9289472 intergenic not near genes chr3R_11_9285001 chr3R_9285001 RAL-321 2406 chr3R 9294997 9295043 chr3R 9295095 9295141 14 98 21.5 18.5 20.0 0.7 144 chr3R 9294997 3` UTR CG8861 - chr3R 9295069 3` UTR CG8861 - chr3R 9295141 3` UTR CG8861 - chr3R_14_9295001 chr3R_9295001 RAL-321 2407 chr3R 9319558 9319602 chr3R 9320013 9320057 jockey 18 455 7.5 7.0 7.2 2.2 499 chr3R 9319558 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320057 intron CG8861 - chr3R_18_9315001 chr3R_9315001 RAL-321 2408 chr3R 9361805 9361844 chr3R 9362060 9362105 pogo 19 260 3.5 5.5 4.5 3.5 300 chr3R 9361805 3` UTR CG45050 + chr3R 9361955 3` UTR CG45050 + chr3R 9362105 3` UTR CG45050 + chr3R_19_9360001 chr3R_9360001 RAL-321 2409 chr3R 9379123 9379176 chr3R 9379225 9379278 10 102 0.0 3.0 1.5 4.0 155 chr3R 9379123 intron FER - chr3R 9379200 intron FER - chr3R 9379278 intron FER - chr3R_10_9375001 chr3R_9375001 RAL-321 2410 chr3R 9382796 9382849 chr3R 9382941 9382984 17 142 18.0 18.5 18.2 0.9 188 chr3R 9382796 intron FER - chr3R 9382890 intron FER - chr3R 9382984 intron FER - chr3R_17_9380001 chr3R_9380001 RAL-321 2411 chr3R 9426595 9426644 chr3R 9426696 9426741 15 93 11.5 13.5 12.5 1.1 146 chr3R 9426595 intron ps + chr3R 9426668 intron ps + chr3R 9426741 intron ps + chr3R_15_9425001 chr3R_9425001 RAL-321 2412 chr3R 9434697 9434713 chr3R 9434804 9434820 5 107 18.0 17.0 17.5 0.3 123 chr3R 9434697 intron ps + chr3R 9434758 intron ps + chr3R 9434820 intron ps + chr3R_5_9430001 chr3R_9430001 RAL-321 2413 chr3R 9447435 9447461 chr3R 9447559 9447585 11 124 9.0 11.5 10.2 1.0 150 chr3R 9447435 intron ps + chr3R 9447510 intron ps + chr3R 9447585 intron ps + chr3R_11_9445001 chr3R_9445001 RAL-321 2414 chr3R 9599793 9599828 chr3R 9599987 9600010 7 190 14.5 15.0 14.8 0.4 217 chr3R 9599793 intron CG8312 + chr3R 9599902 intron CG8312 + chr3R 9600010 intron CG8312 + chr3R_7_9595001 chr3R_9595001 RAL-321 2415 chr3R 9608646 9608685 chr3R 9608921 9608961 16 284 13.5 14.5 14.0 1.1 315 chr3R 9608646 intron CG8312 + chr3R 9608804 intron CG8312 + chr3R 9608961 intron CG8312 + chr3R_16_9605001 chr3R_9605001 RAL-321 2416 chr3R 9611856 9611891 chr3R 9611958 9611993 9 102 25.0 18.0 21.5 0.4 137 chr3R 9611856 intron CG8312 + chr3R 9611924 intron CG8312 + chr3R 9611993 intron CG8312 + chr3R_9_9610001 chr3R_9610001 RAL-321 2417 chr3R 9836856 9836900 chr3R 9836959 9836993 5 104 18.5 18.5 18.5 0.3 137 chr3R 9836856 intron Teh1 - chr3R 9836924 intron Teh1 - chr3R 9836993 intron Teh1 - chr3R_5_9835001 chr3R_9835001 RAL-321 2418 chr3R 9857787 9857824 chr3R 9858247 9858278 8 459 16.0 22.5 19.2 0.4 491 chr3R 9857787 intron Teh1 - chr3R 9858032 intron Teh1 - chr3R 9858278 intron Teh1 - chr3R_8_9855001 chr3R_9855001 RAL-321 2419 chr3R 9891449 9891494 chr3R 9891609 9891632 6 149 9.0 8.0 8.5 0.6 183 chr3R 9891449 intron Glut4EF + chr3R 9891540 intron Glut4EF + chr3R 9891632 intron Glut4EF + chr3R_6_9890001 chr3R_9890001 RAL-321 2420 chr3R 9898768 9898819 chr3R 9898880 9898931 12 112 15.0 16.5 15.8 0.7 163 chr3R 9898768 intron Glut4EF + chr3R 9898850 intron Glut4EF + chr3R 9898931 intron Glut4EF + chr3R_12_9895001 chr3R_9895001 RAL-321 2421 chr3R 9936879 9936910 chr3R 9936975 9937006 6 95 14.0 15.0 14.5 0.4 127 chr3R 9936879 intron Glut4EF + chr3R 9936942 intron Glut4EF + chr3R 9937006 intron Glut4EF + chr3R_6_9935001 chr3R_9935001 RAL-321 2422 chr3R 10062226 10062278 chr3R 10062369 10062421 14 143 23.0 26.0 24.5 0.5 195 chr3R 10062226 intergenic CR45205 -,CG33630 + chr3R 10062324 intergenic CG33630 +,CR45205 - chr3R 10062421 intergenic CG33630 +,CR45205 - chr3R_14_10060001 chr3R_10060001 RAL-321 2423 chr3R 10174104 10174151 chr3R 10174206 10174253 11 101 18.0 18.0 18.0 0.6 149 chr3R 10174104 intron CG12814 - chr3R 10174178 intron CG12814 - chr3R 10174253 intron CG12814 - chr3R_11_10170001 chr3R_10170001 RAL-321 2424 chr3R 10231125 10231178 chr3R 10231615 10231668 13 490 19.0 19.0 19.0 0.7 543 chr3R 10231125 intron CG42795 + chr3R 10231396 intron CG42795 + chr3R 10231668 intron CG42795 + chr3R_13_10230001 chr3R_10230001 RAL-321 2425 chr3R 10231769 10231814 chr3R 10237366 10237411 mdg3 22 5595 7.5 7.5 7.5 2.6 5642 chr3R 10231769 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237411 intron CG42795 + chr3R_22_10230001 chr3R_10230001 RAL-321 2426 chr3R 10255363 10255387 chr3R 10260823 10260847 I-element 11 5459 12.5 10.0 11.2 0.9 5484 chr3R 10255363 3` UTR Sirt6 - chr3R 10258105 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_11_10255001 chr3R_10255001 RAL-321 2427 chr3R 10275558 10275585 chr3R 10275654 10275682 10 97 21.0 24.5 22.8 0.4 124 chr3R 10275558 intron CG43143 + chr3R 10275620 intron CG43143 + chr3R 10275682 intron CG43143 + chr3R_10_10275001 chr3R_10275001 RAL-321 2428 chr3R 10306958 10307006 chr3R 10312197 10312245 20 5240 35.0 37.5 36.2 0.5 5287 chr3R 10306958 exon CG43143 + chr3R 10309602 exon CG6293 - chr3R 10312245 3` UTR Bruce - chr3R_20_10305001 chr3R_10305001 RAL-321 2429 chr3R 10394050 10394100 chr3R 10394169 10394219 16 115 22.0 24.5 23.2 0.7 169 chr3R 10394050 intron cwo + chr3R 10394134 intron cwo + chr3R 10394219 intron cwo + chr3R_16_10390001 chr3R_10390001 RAL-321 2430 chr3R 10403012 10403058 chr3R 10403113 10403159 7 101 15.0 13.0 14.0 0.5 147 chr3R 10403012 3` UTR CG6325 - chr3R 10403086 3` UTR CG6325 - chr3R 10403159 3` UTR CG6325 - chr3R_7_10400001 chr3R_10400001 RAL-321 2431 chr3R 10430654 10430701 chr3R 10430763 10430808 7 107 17.0 19.5 18.2 0.4 154 chr3R 10430654 intergenic not near genes chr3R 10430731 intergenic not near genes chr3R 10430808 intergenic not near genes chr3R_7_10430001 chr3R_10430001 RAL-321 2432 chr3R 10492743 10492785 chr3R 10492851 10492888 11 104 18.5 14.0 16.2 0.6 145 chr3R 10492743 intergenic not near genes chr3R 10492816 intergenic not near genes chr3R 10492888 intergenic not near genes chr3R_11_10490001 chr3R_10490001 RAL-321 2433 chr3R 10495169 10495186 chr3R 10495348 10495365 5 179 18.0 8.5 13.2 0.4 196 chr3R 10495169 intergenic not near genes chr3R 10495267 intergenic not near genes chr3R 10495365 intergenic not near genes chr3R_5_10495001 chr3R_10495001 RAL-321 2434 chr3R 10517801 10517849 chr3R 10517904 10517926 10 99 15.5 17.0 16.2 0.6 125 chr3R 10517801 intron hth - chr3R 10517864 intron hth - chr3R 10517926 intron hth - chr3R_10_10515001 chr3R_10515001 RAL-321 2435 chr3R 10531882 10531896 chr3R 10531955 10531997 4 94 16.0 12.0 14.0 0.3 115 chr3R 10531882 intron hth - chr3R 10531940 intron hth - chr3R 10531997 intron hth - chr3R_4_10530001 chr3R_10530001 RAL-321 2436 chr3R 10535314 10535472 chr3R 10535427 10535588 19 115 11.0 10.0 10.5 1.7 274 chr3R 10535314 intron hth - chr3R 10535451 intron hth - chr3R 10535588 intron hth - chr3R_19_10535001 chr3R_10535001 RAL-321 2437 chr3R 10593450 10593460 chr3R 10593516 10593547 6 88 16.0 19.0 17.5 0.3 97 chr3R 10593450 intron hth - chr3R 10593498 intron hth - chr3R 10593547 intron hth - chr3R_6_10590001 chr3R_10590001 RAL-321 2438 chr3R 10646096 10646134 chr3R 10646267 10646303 13 170 15.0 13.0 14.0 0.9 207 chr3R 10646096 intergenic CR44018 + chr3R 10646200 intergenic CR44018 + chr3R 10646303 intergenic not near genes chr3R_13_10645001 chr3R_10645001 RAL-321 2439 chr3R 10651788 10651840 chr3R 10651907 10651957 13 117 20.0 15.5 17.8 0.7 169 chr3R 10651788 intergenic not near genes chr3R 10651872 intergenic not near genes chr3R 10651957 intergenic not near genes chr3R_13_10650001 chr3R_10650001 RAL-321 2440 chr3R 10723751 10723772 chr3R 10723855 10723858 17 110 12.0 0.0 6.0 2.4 107 chr3R 10723751 intergenic not near genes chr3R 10723804 intergenic not near genes chr3R 10723858 intergenic not near genes chr3R_17_10720001 chr3R_10720001 RAL-321 2441 chr3R 10727624 10727651 chr3R 10727724 10727751 14 98 7.5 5.0 6.2 1.9 127 chr3R 10727624 intergenic not near genes chr3R 10727688 intergenic not near genes chr3R 10727751 intergenic not near genes chr3R_14_10725001 chr3R_10725001 RAL-321 2442 chr3R 10727657 10727679 chr3R 10727723 10727779 12 93 3.0 5.0 4.0 2.4 122 chr3R 10727657 intergenic not near genes chr3R 10727718 intergenic not near genes chr3R 10727779 intergenic not near genes chr3R_12_10725001 chr3R_10725001 RAL-321 2443 chr3R 10732309 10732346 chr3R 10733201 10733238 11 892 2.5 8.5 5.5 1.7 929 chr3R 10732309 intergenic not near genes chr3R 10732774 intergenic not near genes chr3R 10733238 intergenic not near genes chr3R_11_10730001 chr3R_10730001 RAL-321 2444 chr3R 10745405 10745451 chr3R 10745512 10745547 11 98 12.0 17.0 14.5 0.7 142 chr3R 10745405 intron TkR86C - chr3R 10745476 intron TkR86C - chr3R 10745547 intron TkR86C - chr3R_11_10745001 chr3R_10745001 RAL-321 2445 chr3R 10868573 10868622 chr3R 10868671 10868678 12 80 2.5 5.0 3.8 2.5 105 chr3R 10868573 5` UTR SelR - chr3R 10868626 5` UTR SelR - chr3R 10868678 intergenic Tsp86D +,SelR - chr3R_12_10865001 chr3R_10865001 RAL-321 2446 chr3R 10904889 10904926 chr3R 10905113 10905149 10 224 20.5 13.5 17.0 0.6 260 chr3R 10904889 intergenic not near genes chr3R 10905019 intergenic not near genes chr3R 10905149 intergenic not near genes chr3R_10_10905001 chr3R_10905001 RAL-321 2447 chr3R 10919663 10919713 chr3R 10919761 10919811 23 96 10.5 3.5 7.0 2.9 148 chr3R 10919663 intergenic not near genes chr3R 10919737 intergenic not near genes chr3R 10919811 intergenic not near genes chr3R_23_10915001 chr3R_10915001 RAL-321 2448 chr3R 10920030 10920077 chr3R 10920128 10920175 27 97 7.0 9.5 8.2 2.9 145 chr3R 10920030 intergenic not near genes chr3R 10920102 intergenic not near genes chr3R 10920175 intergenic not near genes chr3R_27_10920001 chr3R_10920001 RAL-321 2449 chr3R 10954395 10954427 chr3R 10954588 10954635 5 199 21.0 12.5 16.8 0.3 240 chr3R 10954395 intergenic not near genes chr3R 10954515 intergenic not near genes chr3R 10954635 intergenic not near genes chr3R_5_10950001 chr3R_10950001 RAL-321 2450 chr3R 10971463 10971512 chr3R 10971574 10971612 13 106 18.0 15.5 16.8 0.7 149 chr3R 10971463 intergenic not near genes chr3R 10971538 intergenic not near genes chr3R 10971612 intergenic not near genes chr3R_13_10970001 chr3R_10970001 RAL-321 2451 chr3R 10974109 10974141 chr3R 10974221 10974253 9 111 22.0 23.0 22.5 0.4 144 chr3R 10974109 intron CG34114 + chr3R 10974181 intron CG34114 + chr3R 10974253 intron CG34114 + chr3R_9_10970001 chr3R_10970001 RAL-321 2452 chr3R 10984361 10984409 chr3R 10984484 10984526 10 117 13.0 15.5 14.2 0.7 165 chr3R 10984361 intron CG34114 + chr3R 10984444 intron CG34114 + chr3R 10984526 intron CG34114 + chr3R_10_10980001 chr3R_10980001 RAL-321 2453 chr3R 11024174 11024207 chr3R 11024278 11024323 16 112 11.5 15.0 13.2 1.1 149 chr3R 11024174 intron CG34114 + chr3R 11024248 intron CG34114 + chr3R 11024323 intron CG34114 + chr3R_16_11020001 chr3R_11020001 RAL-321 2454 chr3R 11043098 11043118 chr3R 11043218 11043224 4 118 10.5 9.5 10.0 0.4 126 chr3R 11043098 intron CG34114 + chr3R 11043161 intron CG34114 + chr3R 11043224 intron CG34114 + chr3R_4_11040001 chr3R_11040001 RAL-321 2455 chr3R 11056877 11056902 chr3R 11056972 11057000 8 98 11.0 0.0 5.5 1.2 123 chr3R 11056877 intergenic not near genes chr3R 11056938 intergenic not near genes chr3R 11057000 intergenic not near genes chr3R_8_11055001 chr3R_11055001 RAL-321 2456 chr3R 11065580 11065611 chr3R 11071252 11071285 297 4 5672 4.0 5.5 4.8 0.7 5705 chr3R 11065580 intergenic not near genes chr3R 11068432 intergenic not near genes chr3R 11071285 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-321 2457 chr3R 11085458 11085490 chr3R 11085539 11085544 4 82 18.5 18.0 18.2 0.2 86 chr3R 11085458 3` UTR CR44940 - chr3R 11085501 intergenic CR44940 - chr3R 11085544 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-321 2458 chr3R 11087426 11087460 chr3R 11087522 11087556 9 93 16.0 14.0 15.0 0.6 130 chr3R 11087426 intergenic not near genes chr3R 11087491 intergenic not near genes chr3R 11087556 intergenic not near genes chr3R_9_11085001 chr3R_11085001 RAL-321 2459 chr3R 11097280 11097329 chr3R 11097685 11097734 13 400 10.5 9.0 9.8 1.2 454 chr3R 11097280 intergenic not near genes chr3R 11097507 intergenic not near genes chr3R 11097734 intergenic not near genes chr3R_13_11095001 chr3R_11095001 RAL-321 2460 chr3R 11099639 11099676 chr3R 11099791 11099828 7 150 17.0 15.5 16.2 0.4 189 chr3R 11099639 intergenic not near genes chr3R 11099734 intergenic not near genes chr3R 11099828 intergenic not near genes chr3R_7_11095001 chr3R_11095001 RAL-321 2461 chr3R 11102312 11102350 chr3R 11102408 11102425 15 94 6.0 6.0 6.0 2.1 113 chr3R 11102312 intergenic not near genes chr3R 11102368 intergenic not near genes chr3R 11102425 intergenic not near genes chr3R_15_11100001 chr3R_11100001 RAL-321 2462 chr3R 11103152 11103167 chr3R 11103254 11103269 9 102 0.0 0.0 0.0 9.0 117 chr3R 11103152 intergenic not near genes chr3R 11103210 intergenic not near genes chr3R 11103269 intergenic not near genes chr3R_9_11100001 chr3R_11100001 RAL-321 2463 chr3R 11151102 11151149 chr3R 11151317 11151324 6 208 21.0 9.5 15.2 0.4 222 chr3R 11151102 3` UTR Ugt86Di - chr3R 11151213 3` UTR Ugt86Di - chr3R 11151324 3` UTR Ugt86Di - chr3R_6_11150001 chr3R_11150001 RAL-321 2464 chr3R 11155024 11155063 chr3R 11155122 11155161 16 98 17.5 11.5 14.5 1.0 137 chr3R 11155024 intron Ugt86Dc + chr3R 11155092 intron Ugt86Dc + chr3R 11155161 intron Ugt86Dc + chr3R_16_11155001 chr3R_11155001 RAL-321 2465 chr3R 11197968 11198010 chr3R 11198087 11198129 8 117 19.5 19.5 19.5 0.4 161 chr3R 11197968 intron cu + chr3R 11198048 intron cu + chr3R 11198129 intron cu + chr3R_8_11195001 chr3R_11195001 RAL-321 2466 chr3R 11208189 11208240 chr3R 11213092 11213143 9 4903 40.0 31.0 35.5 0.2 4954 chr3R 11208189 intron cu + chr3R 11210666 exon Tctp + chr3R 11213143 exon ZnT86D - chr3R_9_11210001 chr3R_11210001 RAL-321 2467 chr3R 11220260 11220303 chr3R 11220399 11220442 7 133 25.0 18.5 21.8 0.3 182 chr3R 11220260 intergenic CG6693 -,CG6689 - chr3R 11220351 3` UTR CG6693 - chr3R 11220442 3` UTR CG6693 - chr3R_7_11220001 chr3R_11220001 RAL-321 2468 chr3R 11263479 11263529 chr3R 11263582 11263632 15 101 15.0 12.5 13.8 1.0 153 chr3R 11263479 intergenic not near genes chr3R 11263556 intergenic not near genes chr3R 11263632 intergenic not near genes chr3R_15_11260001 chr3R_11260001 RAL-321 2469 chr3R 11269438 11269479 chr3R 11269583 11269624 11 145 16.5 12.5 14.5 0.7 186 chr3R 11269438 3` UTR CR31386 - chr3R 11269531 3` UTR CR31386 - chr3R 11269624 3` UTR CR31386 - chr3R_11_11265001 chr3R_11265001 RAL-321 2470 chr3R 11342521 11342572 chr3R 11342617 11342668 12 96 22.0 20.0 21.0 0.5 147 chr3R 11342521 intron pros + chr3R 11342594 intron pros + chr3R 11342668 intron pros + chr3R_12_11340001 chr3R_11340001 RAL-321 2471 chr3R 11379217 11379258 chr3R 11388392 11388433 roo 20 9174 8.0 6.5 7.2 2.4 9216 chr3R 11379217 intron pros + chr3R 11383825 intron pros + chr3R 11388433 intron pros + chr3R_20_11380001 chr3R_11380001 RAL-321 2472 chr3R 11404921 11404963 chr3R 11405021 11405056 7 99 18.5 18.0 18.2 0.4 135 chr3R 11404921 3` UTR pros + chr3R 11404988 3` UTR pros + chr3R 11405056 3` UTR pros + chr3R_7_11400001 chr3R_11400001 RAL-321 2473 chr3R 11442321 11442360 chr3R 11442526 11442565 5 202 15.5 17.0 16.2 0.3 244 chr3R 11442321 intron,intron sals -,CG17230 + chr3R 11442443 intron,intron sals -,CG17230 + chr3R 11442565 intron,intron sals -,CG17230 + chr3R_5_11440001 chr3R_11440001 RAL-321 2474 chr3R 11476933 11476969 chr3R 11477055 11477091 9 121 9.5 15.0 12.2 0.7 158 chr3R 11476933 intergenic not near genes chr3R 11477012 intergenic not near genes chr3R 11477091 intergenic not near genes chr3R_9_11475001 chr3R_11475001 RAL-321 2475 chr3R 11513834 11513874 chr3R 11513937 11513977 13 99 9.0 10.0 9.5 1.2 143 chr3R 11513834 intergenic not near genes chr3R 11513906 intergenic not near genes chr3R 11513977 intergenic not near genes chr3R_13_11510001 chr3R_11510001 RAL-321 2476 chr3R 11518800 11518843 chr3R 11518911 11518951 18 110 6.0 10.0 8.0 2.0 151 chr3R 11518800 intergenic not near genes chr3R 11518876 intergenic not near genes chr3R 11518951 intergenic not near genes chr3R_18_11515001 chr3R_11515001 RAL-321 2477 chr3R 11549795 11549821 chr3R 11549893 11549919 11 98 8.0 5.0 6.5 1.5 124 chr3R 11549795 intergenic not near genes chr3R 11549857 intergenic not near genes chr3R 11549919 intergenic not near genes chr3R_11_11545001 chr3R_11545001 RAL-321 2478 chr3R 11639223 11639235 chr3R 11639388 11639400 5 165 29.5 31.0 30.2 0.2 177 chr3R 11639223 intron Csk - chr3R 11639312 intron Csk - chr3R 11639400 intron Csk - chr3R_5_11635001 chr3R_11635001 RAL-321 2479 chr3R 11664778 11664821 chr3R 11664885 11664933 19 108 9.5 12.0 10.8 1.6 155 chr3R 11664778 intron CG42327 + chr3R 11664856 intron CG42327 + chr3R 11664933 intron CG42327 + chr3R_19_11660001 chr3R_11660001 RAL-321 2480 chr3R 11684364 11684391 chr3R 11684576 11684579 5 211 24.0 27.0 25.5 0.2 215 chr3R 11684364 intergenic CG6830 -,CG6834 - chr3R 11684472 intergenic CG6830 -,CG6834 - chr3R 11684579 intergenic CG6834 -,CG6830 - chr3R_5_11680001 chr3R_11680001 RAL-321 2481 chr3R 11684614 11684665 chr3R 11687759 11687810 10 3144 25.0 32.5 28.8 0.3 3196 chr3R 11684614 intergenic CG6834 -,CG6830 - chr3R 11686212 exon CG6834 - chr3R 11687810 exon CG6834 - chr3R_10_11685001 chr3R_11685001 RAL-321 2482 chr3R 11694704 11694750 chr3R 11694817 11694863 26 112 5.0 7.0 6.0 3.7 159 chr3R 11694704 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694863 intergenic not near genes chr3R_26_11690001 chr3R_11690001 RAL-321 2483 chr3R 11710196 11710233 chr3R 11710294 11710329 5 96 27.5 26.5 27.0 0.2 133 chr3R 11710196 intergenic not near genes chr3R 11710262 intergenic not near genes chr3R 11710329 intergenic not near genes chr3R_5_11710001 chr3R_11710001 RAL-321 2484 chr3R 11734148 11734188 chr3R 11734287 11734309 12 134 3.0 7.0 5.0 2.0 161 chr3R 11734148 intergenic not near genes chr3R 11734228 intergenic not near genes chr3R 11734309 intergenic not near genes chr3R_12_11730001 chr3R_11730001 RAL-321 2485 chr3R 11740435 11740487 chr3R 11743522 11743574 43 3088 64.5 53.5 59.0 0.7 3139 chr3R 11740435 exon Blm - chr3R 11742004 5` UTR CG14722 + chr3R 11743574 exon CG14722 + chr3R_43_11740001 chr3R_11740001 RAL-321 2486 chr3R 11830335 11830354 chr3R 11830439 11830458 4 104 22.5 26.0 24.2 0.2 123 chr3R 11830335 intron CG6959 - chr3R 11830396 intron CG6959 - chr3R 11830458 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-321 2487 chr3R 11835640 11835672 chr3R 11835726 11835747 8 93 22.0 21.0 21.5 0.4 107 chr3R 11835640 intron CG6959 - chr3R 11835694 intron CG6959 - chr3R 11835747 intron CG6959 - chr3R_8_11835001 chr3R_11835001 RAL-321 2488 chr3R 11841057 11841095 chr3R 11846252 11846305 BS 16 5204 4.5 5.5 5.0 2.7 5248 chr3R 11841057 intron CG6959 - chr3R 11843681 intron CG6959 - chr3R 11846305 intron CG6959 - chr3R_16_11840001 chr3R_11840001 RAL-321 2489 chr3R 11853419 11853473 chr3R 11853588 11853633 22 166 0.5 9.5 5.0 3.7 214 chr3R 11853419 intron CG6959 - chr3R 11853526 intron CG6959 - chr3R 11853633 intron CG6959 - chr3R_22_11850001 chr3R_11850001 RAL-321 2490 chr3R 11853753 11853776 chr3R 11853878 11853901 11 124 20.0 18.0 19.0 0.6 148 chr3R 11853753 intron CG6959 - chr3R 11853827 intron CG6959 - chr3R 11853901 intron CG6959 - chr3R_11_11850001 chr3R_11850001 RAL-321 2491 chr3R 11853778 11853799 chr3R 11853872 11853924 12 122 16.5 14.5 15.5 0.7 146 chr3R 11853778 intron CG6959 - chr3R 11853851 intron CG6959 - chr3R 11853924 intron CG6959 - chr3R_12_11850001 chr3R_11850001 RAL-321 2492 chr3R 11865833 11865872 chr3R 11865948 11865987 6 115 26.5 26.0 26.2 0.2 154 chr3R 11865833 intron CG6959 - chr3R 11865910 intron CG6959 - chr3R 11865987 intron CG6959 - chr3R_6_11865001 chr3R_11865001 RAL-321 2493 chr3R 11957836 11957873 chr3R 11958139 11958176 S-element 12 301 8.0 1.0 4.5 2.2 340 chr3R 11957836 intergenic not near genes chr3R 11958006 intergenic not near genes chr3R 11958176 intergenic not near genes chr3R_12_11955001 chr3R_11955001 RAL-321 2494 chr3R 11994741 11994763 chr3R 11994998 11995030 6 264 19.0 13.5 16.2 0.3 289 chr3R 11994741 3` UTR Tk - chr3R 11994886 intron Tk - chr3R 11995030 exon Tk - chr3R_6_11990001 chr3R_11990001 RAL-321 2495 chr3R 12022865 12022912 chr3R 12025062 12025109 pogo 24 2196 5.0 7.5 6.2 3.3 2244 chr3R 12022865 intergenic not near genes chr3R 12023987 intergenic not near genes chr3R 12025109 intergenic not near genes chr3R_24_12020001 chr3R_12020001 RAL-321 2496 chr3R 12045157 12045200 chr3R 12045252 12045290 12 95 5.5 3.5 4.5 2.2 133 chr3R 12045157 intergenic not near genes chr3R 12045224 intergenic not near genes chr3R 12045290 intergenic not near genes chr3R_12_12045001 chr3R_12045001 RAL-321 2497 chr3R 12046766 12046782 chr3R 12046873 12046889 4 107 14.5 22.5 18.5 0.2 123 chr3R 12046766 intergenic not near genes chr3R 12046828 intergenic not near genes chr3R 12046889 intergenic not near genes chr3R_4_12045001 chr3R_12045001 RAL-321 2498 chr3R 12082002 12082030 chr3R 12082078 12082113 18 91 6.5 8.5 7.5 2.1 111 chr3R 12082002 intron CG14741 - chr3R 12082058 intron CG14741 - chr3R 12082113 intron CG14741 - chr3R_18_12080001 chr3R_12080001 RAL-321 2499 chr3R 12102857 12102859 chr3R 12102977 12102980 4 121 12.5 9.5 11.0 0.3 123 chr3R 12102857 intron dpr17 + chr3R 12102918 intron dpr17 + chr3R 12102980 intron dpr17 + chr3R_4_12100001 chr3R_12100001 RAL-321 2500 chr3R 12102861 12102882 chr3R 12102972 12102998 11 117 10.0 8.0 9.0 1.1 137 chr3R 12102861 intron dpr17 + chr3R 12102930 intron dpr17 + chr3R 12102998 intron dpr17 + chr3R_11_12100001 chr3R_12100001 RAL-321 2501 chr3R 12111867 12111924 chr3R 12111972 12112020 10 97 2.0 5.0 3.5 2.2 153 chr3R 12111867 intergenic dpr17 + chr3R 12111944 intergenic not near genes chr3R 12112020 intergenic not near genes chr3R_10_12110001 chr3R_12110001 RAL-321 2502 chr3R 12134940 12134981 chr3R 12135098 12135139 7 158 11.0 6.0 8.5 0.7 199 chr3R 12134940 intergenic not near genes chr3R 12135040 intergenic not near genes chr3R 12135139 intergenic not near genes chr3R_7_12135001 chr3R_12135001 RAL-321 2503 chr3R 12154033 12154066 chr3R 12154451 12154489 9 419 42.5 25.0 33.8 0.3 456 chr3R 12154033 intron dpr15 - chr3R 12154261 intron dpr15 - chr3R 12154489 intron dpr15 - chr3R_9_12150001 chr3R_12150001 RAL-321 2504 chr3R 12175008 12175043 chr3R 12175377 12175428 11 375 8.0 9.5 8.8 1.1 420 chr3R 12175008 intergenic not near genes chr3R 12175218 intergenic not near genes chr3R 12175428 intergenic not near genes chr3R_11_12175001 chr3R_12175001 RAL-321 2505 chr3R 12175216 12175249 chr3R 12175316 12175350 4 101 1.0 1.0 1.0 2.0 134 chr3R 12175216 intergenic not near genes chr3R 12175283 intergenic not near genes chr3R 12175350 intergenic not near genes chr3R_4_12175001 chr3R_12175001 RAL-321 2506 chr3R 12202256 12202318 chr3R 12202396 12202447 13 135 8.0 12.0 10.0 1.2 191 chr3R 12202256 intergenic not near genes chr3R 12202352 intergenic not near genes chr3R 12202447 intergenic not near genes chr3R_13_12200001 chr3R_12200001 RAL-321 2507 chr3R 12267838 12267884 chr3R 12267938 12267984 16 100 10.0 10.5 10.2 1.4 146 chr3R 12267838 intron svp + chr3R 12267911 intron svp + chr3R 12267984 intron svp + chr3R_16_12265001 chr3R_12265001 RAL-321 2508 chr3R 12277912 12277950 chr3R 12278028 12278066 4 116 20.0 21.0 20.5 0.2 154 chr3R 12277912 intron svp + chr3R 12277989 intron svp + chr3R 12278066 intron svp + chr3R_4_12275001 chr3R_12275001 RAL-321 2509 chr3R 12321951 12321993 chr3R 12322051 12322093 19 97 17.0 11.0 14.0 1.3 142 chr3R 12321951 intergenic not near genes chr3R 12322022 intergenic not near genes chr3R 12322093 intergenic not near genes chr3R_19_12320001 chr3R_12320001 RAL-321 2510 chr3R 12344118 12344142 chr3R 12344215 12344234 5 91 25.5 27.5 26.5 0.2 116 chr3R 12344118 intergenic not near genes chr3R 12344176 intergenic not near genes chr3R 12344234 intergenic not near genes chr3R_5_12340001 chr3R_12340001 RAL-321 2511 chr3R 12392880 12392900 chr3R 12392990 12393004 4 114 16.0 18.5 17.2 0.2 124 chr3R 12392880 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392942 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393004 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_4_12390001 chr3R_12390001 RAL-321 2512 chr3R 12516042 12516094 chr3R 12516157 12516209 23 115 3.5 7.5 5.5 3.5 167 chr3R 12516042 intron Octbeta3R - chr3R 12516126 intron Octbeta3R - chr3R 12516209 intron Octbeta3R - chr3R_23_12515001 chr3R_12515001 RAL-321 2513 chr3R 12528110 12528150 chr3R 12528205 12528236 4 93 24.5 26.0 25.2 0.2 126 chr3R 12528110 intron,intron Octbeta3R -,Hug + chr3R 12528173 intron,intron Octbeta3R -,Hug + chr3R 12528236 intron,intron Octbeta3R -,Hug + chr3R_4_12525001 chr3R_12525001 RAL-321 2514 chr3R 12568476 12568523 chr3R 12568576 12568623 9 99 18.0 17.0 17.5 0.5 147 chr3R 12568476 intron Octbeta2R - chr3R 12568550 intron Octbeta2R - chr3R 12568623 intron Octbeta2R - chr3R_9_12565001 chr3R_12565001 RAL-321 2515 chr3R 12569930 12569982 chr3R 12570031 12570032 5 91 17.0 19.5 18.2 0.3 102 chr3R 12569930 intron Octbeta2R - chr3R 12569981 intron Octbeta2R - chr3R 12570032 intron Octbeta2R - chr3R_5_12565001 chr3R_12565001 RAL-321 2516 chr3R 12599360 12599405 chr3R 12599463 12599501 13 101 6.0 6.0 6.0 1.9 141 chr3R 12599360 intergenic not near genes chr3R 12599430 intergenic not near genes chr3R 12599501 intergenic not near genes chr3R_13_12595001 chr3R_12595001 RAL-321 2517 chr3R 12665838 12665889 chr3R 12665934 12665985 17 94 12.0 13.5 12.8 1.2 147 chr3R 12665838 intron CG14395 + chr3R 12665912 intron CG14395 + chr3R 12665985 intron CG14395 + chr3R_17_12665001 chr3R_12665001 RAL-321 2518 chr3R 12720710 12720758 chr3R 12720900 12720941 16 190 13.5 15.5 14.5 1.0 231 chr3R 12720710 intron Men - chr3R 12720826 intron Men - chr3R 12720941 intron Men - chr3R_16_12720001 chr3R_12720001 RAL-321 2519 chr3R 12725943 12725970 chr3R 12726056 12726095 8 109 9.0 12.0 10.5 0.7 152 chr3R 12725943 intergenic not near genes chr3R 12726019 intergenic not near genes chr3R 12726095 intergenic not near genes chr3R_8_12725001 chr3R_12725001 RAL-321 2520 chr3R 12733847 12733866 chr3R 12733947 12733961 6 99 19.5 21.5 20.5 0.3 114 chr3R 12733847 intergenic not near genes chr3R 12733904 intergenic not near genes chr3R 12733961 intergenic not near genes chr3R_6_12730001 chr3R_12730001 RAL-321 2521 chr3R 12735162 12735183 chr3R 12735432 12735453 12 268 9.5 7.5 8.5 1.3 291 chr3R 12735162 intergenic not near genes chr3R 12735308 intergenic not near genes chr3R 12735453 intergenic not near genes chr3R_12_12735001 chr3R_12735001 RAL-321 2522 chr3R 12735780 12735790 chr3R 12735898 12735908 4 118 17.5 13.0 15.2 0.2 128 chr3R 12735780 intergenic not near genes chr3R 12735844 intergenic not near genes chr3R 12735908 intergenic not near genes chr3R_4_12735001 chr3R_12735001 RAL-321 2523 chr3R 12735791 12735820 chr3R 12735893 12735938 9 116 13.5 12.0 12.8 0.7 147 chr3R 12735791 intergenic not near genes chr3R 12735864 intergenic not near genes chr3R 12735938 intergenic not near genes chr3R_9_12735001 chr3R_12735001 RAL-321 2524 chr3R 12748942 12748989 chr3R 12749055 12749102 9 111 22.5 25.0 23.8 0.4 160 chr3R 12748942 intron beat-Vc - chr3R 12749022 intron beat-Vc - chr3R 12749102 intron beat-Vc - chr3R_9_12745001 chr3R_12745001 RAL-321 2525 chr3R 12763115 12763153 chr3R 12763212 12763250 26 97 0.0 9.5 4.8 4.5 135 chr3R 12763115 intron beat-Vc - chr3R 12763182 intron beat-Vc - chr3R 12763250 intron beat-Vc - chr3R_26_12760001 chr3R_12760001 RAL-321 2526 chr3R 12766414 12766418 chr3R 12766498 12766522 5 89 9.0 8.5 8.8 0.5 108 chr3R 12766414 intron beat-Vc - chr3R 12766468 intron beat-Vc - chr3R 12766522 intron beat-Vc - chr3R_5_12765001 chr3R_12765001 RAL-321 2527 chr3R 12766421 12766441 chr3R 12766495 12766545 6 98 7.0 7.0 7.0 0.8 124 chr3R 12766421 intron beat-Vc - chr3R 12766483 intron beat-Vc - chr3R 12766545 intron beat-Vc - chr3R_6_12765001 chr3R_12765001 RAL-321 2528 chr3R 12787919 12787951 chr3R 12788022 12788054 7 103 28.5 23.5 26.0 0.3 135 chr3R 12787919 intergenic not near genes chr3R 12787986 intergenic not near genes chr3R 12788054 intergenic not near genes chr3R_7_12785001 chr3R_12785001 RAL-321 2529 chr3R 12819006 12819049 chr3R 12819109 12819152 15 102 9.0 13.0 11.0 1.2 146 chr3R 12819006 intergenic not near genes chr3R 12819079 intergenic not near genes chr3R 12819152 intergenic not near genes chr3R_15_12815001 chr3R_12815001 RAL-321 2530 chr3R 12825809 12825853 chr3R 12825909 12825953 8 97 5.5 7.5 6.5 1.1 144 chr3R 12825809 intergenic not near genes chr3R 12825881 intergenic not near genes chr3R 12825953 intergenic not near genes chr3R_8_12825001 chr3R_12825001 RAL-321 2531 chr3R 12864554 12864593 chr3R 12865059 12865098 roo 5 505 1.5 7.0 4.2 1.0 544 chr3R 12864554 intergenic not near genes chr3R 12864826 intergenic not near genes chr3R 12865098 intergenic not near genes chr3R_5_12860001 chr3R_12860001 RAL-321 2532 chr3R 12866469 12866520 chr3R 12866640 12866691 18 170 9.5 8.0 8.8 1.8 222 chr3R 12866469 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866691 intergenic not near genes chr3R_18_12865001 chr3R_12865001 RAL-321 2533 chr3R 12883774 12883820 chr3R 12883913 12883958 13 138 10.0 13.0 11.5 1.0 184 chr3R 12883774 intergenic not near genes chr3R 12883866 intergenic not near genes chr3R 12883958 intergenic not near genes chr3R_13_12880001 chr3R_12880001 RAL-321 2534 chr3R 12885090 12885125 chr3R 12885217 12885252 7 127 9.5 11.0 10.2 0.6 162 chr3R 12885090 intergenic not near genes chr3R 12885171 intergenic not near genes chr3R 12885252 intergenic not near genes chr3R_7_12885001 chr3R_12885001 RAL-321 2535 chr3R 12894581 12894626 chr3R 12894714 12894759 6 132 8.5 4.0 6.2 0.8 178 chr3R 12894581 intergenic not near genes chr3R 12894670 intergenic not near genes chr3R 12894759 intergenic not near genes chr3R_6_12890001 chr3R_12890001 RAL-321 2536 chr3R 12920137 12920184 chr3R 12925360 12925405 copia 10 5215 5.5 9.0 7.2 1.2 5268 chr3R 12920137 intron beat-Vb + chr3R 12922771 intron beat-Vb + chr3R 12925405 intron beat-Vb + chr3R_10_12920001 chr3R_12920001 RAL-321 2537 chr3R 12947272 12947316 chr3R 12947454 12947493 15 174 10.5 11.5 11.0 1.2 221 chr3R 12947272 intergenic not near genes chr3R 12947382 intergenic not near genes chr3R 12947493 intergenic not near genes chr3R_15_12945001 chr3R_12945001 RAL-321 2538 chr3R 12972536 12972582 chr3R 12972695 12972738 17 159 5.0 7.5 6.2 2.4 202 chr3R 12972536 intron CG7381 - chr3R 12972637 intron CG7381 - chr3R 12972738 intron CG7381 - chr3R_17_12970001 chr3R_12970001 RAL-321 2539 chr3R 13059942 13059977 chr3R 13060157 13060192 23 214 5.5 5.0 5.2 3.7 250 chr3R 13059942 intron sim + chr3R 13060067 intron sim + chr3R 13060192 intron sim + chr3R_23_13060001 chr3R_13060001 RAL-321 2540 chr3R 13064748 13064777 chr3R 13064866 13064896 9 119 0.5 0.0 0.2 7.5 148 chr3R 13064748 intron sim + chr3R 13064822 intron sim + chr3R 13064896 intron sim + chr3R_9_13060001 chr3R_13060001 RAL-321 2541 chr3R 13066984 13067005 chr3R 13067091 13067112 5 107 8.5 5.0 6.8 0.6 128 chr3R 13066984 intron sim + chr3R 13067048 intron sim + chr3R 13067112 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-321 2542 chr3R 13067817 13067871 chr3R 13067917 13067971 18 96 3.0 4.0 3.5 4.0 154 chr3R 13067817 intron sim + chr3R 13067894 intron sim + chr3R 13067971 intron sim + chr3R_18_13065001 chr3R_13065001 RAL-321 2543 chr3R 13075347 13075389 chr3R 13075448 13075490 26 100 2.5 6.0 4.2 5.0 143 chr3R 13075347 intron sim + chr3R 13075418 intron sim + chr3R 13075490 intron sim + chr3R_26_13075001 chr3R_13075001 RAL-321 2544 chr3R 13135821 13135839 chr3R 13138006 13138024 pogo 8 2185 11.5 8.0 9.8 0.7 2203 chr3R 13135821 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136922 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138024 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 RAL-321 2545 chr3R 13138303 13138351 chr3R 13138411 13138458 18 107 2.0 7.0 4.5 3.3 155 chr3R 13138303 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138380 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138458 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_18_13135001 chr3R_13135001 RAL-321 2546 chr3R 13143024 13143038 chr3R 13148620 13148624 mdg3 5 5594 11.5 10.0 10.8 0.4 5600 chr3R 13143024 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145824 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148624 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13145001 chr3R_13145001 RAL-321 2547 chr3R 13143039 13143045 chr3R 13148616 13148641 mdg3 6 5590 11.0 9.0 10.0 0.5 5602 chr3R 13143039 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148641 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13145001 chr3R_13145001 RAL-321 2548 chr3R 13143046 13143066 chr3R 13148615 13148659 mdg3 9 5586 6.0 9.0 7.5 1.1 5613 chr3R 13143046 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145852 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148659 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13145001 chr3R_13145001 RAL-321 2549 chr3R 13174544 13174568 chr3R 13174634 13174665 5 95 22.0 19.0 20.5 0.2 121 chr3R 13174544 intergenic not near genes chr3R 13174604 intergenic not near genes chr3R 13174665 intergenic not near genes chr3R_5_13170001 chr3R_13170001 RAL-321 2550 chr3R 13195934 13195963 chr3R 13196049 13196068 4 112 18.5 23.0 20.8 0.2 134 chr3R 13195934 intergenic not near genes chr3R 13196001 intergenic not near genes chr3R 13196068 intergenic not near genes chr3R_4_13195001 chr3R_13195001 RAL-321 2551 chr3R 13197170 13197204 chr3R 13198470 13198504 5 1300 20.5 34.0 27.2 0.2 1334 chr3R 13197170 intergenic not near genes chr3R 13197837 intergenic not near genes chr3R 13198504 intergenic not near genes chr3R_5_13195001 chr3R_13195001 RAL-321 2552 chr3R 13201765 13201783 chr3R 13201882 13201900 4 117 5.0 7.5 6.2 0.6 135 chr3R 13201765 intergenic not near genes chr3R 13201832 intergenic not near genes chr3R 13201900 intergenic not near genes chr3R_4_13200001 chr3R_13200001 RAL-321 2553 chr3R 13206638 13206677 chr3R 13206895 13206917 7 254 17.5 24.5 21.0 0.3 279 chr3R 13206638 intergenic not near genes chr3R 13206778 intergenic not near genes chr3R 13206917 intergenic not near genes chr3R_7_13205001 chr3R_13205001 RAL-321 2554 chr3R 13254533 13254566 chr3R 13254773 13254803 7 241 21.0 31.0 26.0 0.3 270 chr3R 13254533 intron Ace - chr3R 13254668 intron Ace - chr3R 13254803 intron Ace - chr3R_7_13250001 chr3R_13250001 RAL-321 2555 chr3R 13314085 13314127 chr3R 13318892 13318926 Doc 16 4807 4.5 13.5 9.0 1.6 4841 chr3R 13314085 intergenic not near genes chr3R 13316506 intergenic not near genes chr3R 13318926 intergenic CG45080 - chr3R_16_13315001 chr3R_13315001 RAL-321 2556 chr3R 13348985 13349034 chr3R 13349081 13349130 25 96 6.0 5.0 5.5 3.8 145 chr3R 13348985 intergenic not near genes chr3R 13349058 intergenic not near genes chr3R 13349130 intergenic not near genes chr3R_25_13345001 chr3R_13345001 RAL-321 2557 chr3R 13364614 13364643 chr3R 13364718 13364747 12 104 12.0 0.0 6.0 1.7 133 chr3R 13364614 intron poly - chr3R 13364680 intron poly - chr3R 13364747 intron poly - chr3R_12_13360001 chr3R_13360001 RAL-321 2558 chr3R 13418655 13418677 chr3R 13418744 13418773 7 95 9.5 4.5 7.0 0.9 118 chr3R 13418655 intergenic not near genes chr3R 13418714 intergenic not near genes chr3R 13418773 intergenic not near genes chr3R_7_13415001 chr3R_13415001 RAL-321 2559 chr3R 13435368 13435383 chr3R 13435563 13435578 10 194 13.5 9.0 11.2 0.8 210 chr3R 13435368 intergenic yrt - chr3R 13435473 intergenic yrt - chr3R 13435578 intergenic not near genes chr3R_10_13435001 chr3R_13435001 RAL-321 2560 chr3R 13435391 13435421 chr3R 13435572 13435616 19 194 4.5 10.5 7.5 2.2 225 chr3R 13435391 intergenic yrt - chr3R 13435504 intergenic not near genes chr3R 13435616 intergenic not near genes chr3R_19_13435001 chr3R_13435001 RAL-321 2561 chr3R 13517217 13517258 chr3R 13520042 13520095 jockey 9 2835 4.5 0.5 2.5 2.6 2878 chr3R 13517217 intergenic not near genes chr3R 13518656 intergenic not near genes chr3R 13520095 intergenic not near genes chr3R_9_13515001 chr3R_13515001 RAL-321 2562 chr3R 13563349 13563358 chr3R 13563430 13563455 5 94 6.5 11.5 9.0 0.5 106 chr3R 13563349 intergenic not near genes chr3R 13563402 intergenic not near genes chr3R 13563455 intergenic not near genes chr3R_5_13560001 chr3R_13560001 RAL-321 2563 chr3R 13603038 13603333 chr3R 13603149 13603435 25 110 13.0 7.0 10.0 2.3 397 chr3R 13603038 intergenic not near genes chr3R 13603236 intergenic not near genes chr3R 13603435 intergenic not near genes chr3R_25_13600001 chr3R_13600001 RAL-321 2564 chr3R 13603337 13603366 chr3R 13603449 13603478 10 112 7.0 7.5 7.2 1.2 141 chr3R 13603337 intergenic not near genes chr3R 13603408 intergenic not near genes chr3R 13603478 intergenic not near genes chr3R_10_13600001 chr3R_13600001 RAL-321 2565 chr3R 13604040 13604086 chr3R 13604295 13604341 21 255 7.0 11.0 9.0 2.1 301 chr3R 13604040 intergenic not near genes chr3R 13604190 intergenic not near genes chr3R 13604341 intergenic not near genes chr3R_21_13600001 chr3R_13600001 RAL-321 2566 chr3R 13606695 13606736 chr3R 13606862 13606903 12 166 3.0 7.0 5.0 2.0 208 chr3R 13606695 intergenic CG9759 - chr3R 13606799 intergenic CG9759 - chr3R 13606903 intergenic CG9759 - chr3R_12_13605001 chr3R_13605001 RAL-321 2567 chr3R 13625673 13625720 chr3R 13625774 13625821 10 101 8.0 5.5 6.8 1.3 148 chr3R 13625673 intergenic not near genes chr3R 13625747 intergenic not near genes chr3R 13625821 intergenic not near genes chr3R_10_13625001 chr3R_13625001 RAL-321 2568 chr3R 13659714 13659832 chr3R 13659840 13659941 6 118 1.5 3.5 2.5 1.7 227 chr3R 13659714 intron Hrb87F - chr3R 13659828 intron Hrb87F - chr3R 13659941 intron Hrb87F - chr3R_6_13655001 chr3R_13655001 RAL-321 2569 chr3R 13672925 13672975 chr3R 13673023 13673063 23 97 13.0 17.0 15.0 1.4 138 chr3R 13672925 intron Task6 - chr3R 13672994 intron Task6 - chr3R 13673063 intron Task6 - chr3R_23_13670001 chr3R_13670001 RAL-321 2570 chr3R 13693028 13693028 chr3R 21907534 21907536 17 8214507 38.0 30.0 34.0 0.5 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_17_17800001 chr3R_17800001 RAL-321 2571 chr3R 13712602 13712620 chr3R 13712719 13712737 4 117 19.0 14.0 16.5 0.2 135 chr3R 13712602 3` UTR CR34044 - chr3R 13712670 3` UTR CR34044 - chr3R 13712737 3` UTR CR34044 - chr3R_4_13710001 chr3R_13710001 RAL-321 2572 chr3R 13719931 13719984 chr3R 13720410 13720448 22 474 16.0 12.0 14.0 1.5 517 chr3R 13719931 intron CG34383 + chr3R 13720190 intron CG34383 + chr3R 13720448 intron CG34383 + chr3R_22_13720001 chr3R_13720001 RAL-321 2573 chr3R 13728517 13728555 chr3R 13728614 13728652 4 97 5.5 0.0 2.8 1.1 135 chr3R 13728517 intron CG34383 + chr3R 13728584 intron CG34383 + chr3R 13728652 intron CG34383 + chr3R_4_13725001 chr3R_13725001 RAL-321 2574 chr3R 11988075 11988080 chr3R 13731610 13731615 4 1743535 20.0 35.0 27.5 0.1 1743540 chr3R 11988075 intron mfas - chr3R 12859845 intergenic not near genes chr3R 13731615 intron CG34383 + chr3R_4_12855001 chr3R_12855001 RAL-321 2575 chr3R 13736036 13736086 chr3R 13736146 13736196 21 108 9.5 10.0 9.8 1.9 160 chr3R 13736036 intron CG34383 + chr3R 13736116 intron CG34383 + chr3R 13736196 intron CG34383 + chr3R_21_13735001 chr3R_13735001 RAL-321 2576 chr3R 13745411 13745417 chr3R 13745548 13745555 5 138 19.0 10.5 14.8 0.3 144 chr3R 13745411 intron CG34383 + chr3R 13745483 intron CG34383 + chr3R 13745555 intron CG34383 + chr3R_5_13745001 chr3R_13745001 RAL-321 2577 chr3R 13758130 13758172 chr3R 13758236 13758278 11 105 0.0 5.5 2.8 2.9 148 chr3R 13758130 intron CG34383 + chr3R 13758204 intron CG34383 + chr3R 13758278 intron CG34383 + chr3R_11_13755001 chr3R_13755001 RAL-321 2578 chr3R 13830190 13830210 chr3R 13830281 13830322 10 104 12.0 10.0 11.0 0.8 132 chr3R 13830190 intergenic not near genes chr3R 13830256 intergenic not near genes chr3R 13830322 intergenic not near genes chr3R_10_13830001 chr3R_13830001 RAL-321 2579 chr3R 13896043 13896077 chr3R 13896553 13896572 10 505 10.5 8.0 9.2 1.0 529 chr3R 13896043 intergenic not near genes chr3R 13896308 intergenic not near genes chr3R 13896572 intergenic not near genes chr3R_10_13895001 chr3R_13895001 RAL-321 2580 chr3R 13915665 13915715 chr3R 13916024 13916077 18 361 10.5 9.0 9.8 1.7 412 chr3R 13915665 intergenic not near genes chr3R 13915871 intergenic not near genes chr3R 13916077 intergenic not near genes chr3R_18_13915001 chr3R_13915001 RAL-321 2581 chr3R 13916316 13916326 chr3R 13916393 13916431 6 95 13.5 11.5 12.5 0.4 115 chr3R 13916316 intergenic not near genes chr3R 13916374 intergenic not near genes chr3R 13916431 intergenic not near genes chr3R_6_13915001 chr3R_13915001 RAL-321 2582 chr3R 13916327 13916335 chr3R 13916392 13916440 6 86 13.0 11.0 12.0 0.5 113 chr3R 13916327 intergenic not near genes chr3R 13916384 intergenic not near genes chr3R 13916440 intergenic not near genes chr3R_6_13915001 chr3R_13915001 RAL-321 2583 chr3R 13926325 13926375 chr3R 13926431 13926481 13 106 3.5 2.0 2.8 3.4 156 chr3R 13926325 intergenic not near genes chr3R 13926403 intergenic not near genes chr3R 13926481 intergenic not near genes chr3R_13_13925001 chr3R_13925001 RAL-321 2584 chr3R 13975359 13975408 chr3R 13975459 13975508 19 97 8.5 9.5 9.0 1.9 149 chr3R 13975359 intron rdx - chr3R 13975434 intron rdx - chr3R 13975508 intron rdx - chr3R_19_13975001 chr3R_13975001 RAL-321 2585 chr3R 14021622 14021645 chr3R 14023467 14023490 S-element 7 1845 9.5 6.0 7.8 0.8 1868 chr3R 14021622 intron rdx - chr3R 14022556 intron rdx - chr3R 14023490 intron rdx - chr3R_7_14020001 chr3R_14020001 RAL-321 2586 chr3R 14029844 14029860 chr3R 14029952 14029968 6 108 26.0 26.5 26.2 0.2 124 chr3R 14029844 intron,intron rdx -,Cyp6d5 + chr3R 14029906 intron,intron rdx -,Cyp6d5 + chr3R 14029968 intron,intron rdx -,Cyp6d5 + chr3R_6_14025001 chr3R_14025001 RAL-321 2587 chr3R 14035296 14035332 chr3R 14035391 14035433 16 99 12.5 11.5 12.0 1.2 137 chr3R 14035296 intron CG9922 - chr3R 14035364 intron CG9922 - chr3R 14035433 intron CG9922 - chr3R_16_14035001 chr3R_14035001 RAL-321 2588 chr3R 14037566 14037572 chr3R 14037667 14037673 6 101 9.0 10.0 9.5 0.6 107 chr3R 14037566 intergenic not near genes chr3R 14037620 intergenic not near genes chr3R 14037673 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-321 2589 chr3R 14037576 14037589 chr3R 14037664 14037690 5 95 6.0 9.0 7.5 0.6 114 chr3R 14037576 intergenic not near genes chr3R 14037633 intergenic not near genes chr3R 14037690 intergenic not near genes chr3R_5_14035001 chr3R_14035001 RAL-321 2590 chr3R 14037187 14037207 chr3R 14043057 14043077 6 5870 37.0 32.0 34.5 0.2 5890 chr3R 14037187 intergenic not near genes chr3R 14040132 intergenic not near genes chr3R 14043077 intergenic not near genes chr3R_6_14040001 chr3R_14040001 RAL-321 2591 chr3R 14058108 14058119 chr3R 14058248 14058259 4 140 20.5 8.5 14.5 0.3 151 chr3R 14058108 intron foxo + chr3R 14058184 intron foxo + chr3R 14058259 intron foxo + chr3R_4_14055001 chr3R_14055001 RAL-321 2592 chr3R 14058124 14058151 chr3R 14058246 14058290 13 139 13.5 8.0 10.8 1.1 166 chr3R 14058124 intron foxo + chr3R 14058207 intron foxo + chr3R 14058290 intron foxo + chr3R_13_14055001 chr3R_14055001 RAL-321 2593 chr3R 14062150 14062191 chr3R 14062246 14062287 14 96 13.5 16.0 14.8 0.9 137 chr3R 14062150 intron foxo + chr3R 14062218 intron foxo + chr3R 14062287 intron foxo + chr3R_14_14060001 chr3R_14060001 RAL-321 2594 chr3R 14067122 14067154 chr3R 14067221 14067253 11 99 14.5 12.5 13.5 0.8 131 chr3R 14067122 exon foxo + chr3R 14067188 intron foxo + chr3R 14067253 intron foxo + chr3R_11_14065001 chr3R_14065001 RAL-321 2595 chr3R 14083391 14083419 chr3R 14083512 14083540 5 121 15.5 17.0 16.2 0.3 149 chr3R 14083391 intron foxo + chr3R 14083466 intron foxo + chr3R 14083540 intron foxo + chr3R_5_14080001 chr3R_14080001 RAL-321 2596 chr3R 14109075 14109111 chr3R 14109165 14109212 20 99 12.5 11.0 11.8 1.6 137 chr3R 14109075 intergenic CR44237 -,Or88a + chr3R 14109144 intergenic CR44237 -,Or88a + chr3R 14109212 intergenic CR44237 -,Or88a + chr3R_20_14105001 chr3R_14105001 RAL-321 2597 chr3R 14117423 14117469 chr3R 14117519 14117565 25 96 5.5 8.5 7.0 3.1 142 chr3R 14117423 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117565 intron Kif19A - chr3R_25_14115001 chr3R_14115001 RAL-321 2598 chr3R 14169710 14169765 chr3R 14169822 14169868 4 105 19.0 14.0 16.5 0.2 158 chr3R 14169710 3` UTR Dop1R1 - chr3R 14169789 3` UTR Dop1R1 - chr3R 14169868 3` UTR Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-321 2599 chr3R 14180791 14180834 chr3R 14185576 14185619 F-element 27 4784 8.0 6.5 7.2 3.3 4828 chr3R 14180791 intron Dop1R1 - chr3R 14183205 intron Dop1R1 - chr3R 14185619 intron Dop1R1 - chr3R_27_14180001 chr3R_14180001 RAL-321 2600 chr3R 14194408 14194451 chr3R 14203577 14203620 roo 12 9168 9.0 6.0 7.5 1.4 9212 chr3R 14194408 intron Dop1R1 - chr3R 14199014 intron Dop1R1 - chr3R 14203620 intron Dop1R1 - chr3R_12_14195001 chr3R_14195001 RAL-321 2601 chr3R 14213797 14213826 chr3R 14213897 14213911 7 94 16.0 10.5 13.2 0.5 114 chr3R 14213797 intron Dop1R1 - chr3R 14213854 intron Dop1R1 - chr3R 14213911 intron Dop1R1 - chr3R_7_14210001 chr3R_14210001 RAL-321 2602 chr3R 14226967 14227005 chr3R 14227083 14227121 20 116 11.0 8.5 9.8 1.9 154 chr3R 14226967 intergenic CG9631 - chr3R 14227044 intergenic CG9631 - chr3R 14227121 intergenic CG9631 - chr3R_20_14225001 chr3R_14225001 RAL-321 2603 chr3R 14248717 14248734 chr3R 14248809 14248832 6 97 11.0 19.0 15.0 0.4 115 chr3R 14248717 intergenic not near genes chr3R 14248774 intergenic not near genes chr3R 14248832 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-321 2604 chr3R 14256758 14256767 chr3R 14256864 14256873 6 106 8.5 11.0 9.8 0.6 115 chr3R 14256758 intron,3` UTR Aats-met -,CG43179 + chr3R 14256816 intron,3` UTR Aats-met -,CG43179 + chr3R 14256873 intron,3` UTR Aats-met -,CG43179 + chr3R_6_14255001 chr3R_14255001 RAL-321 2605 chr3R 14257348 14257363 chr3R 14257437 14257482 6 105 19.0 18.5 18.8 0.3 134 chr3R 14257348 intron Aats-met - chr3R 14257415 intron Aats-met - chr3R 14257482 intron Aats-met - chr3R_6_14255001 chr3R_14255001 RAL-321 2606 chr3R 14278419 14278449 chr3R 14278515 14278551 8 101 15.5 15.5 15.5 0.5 132 chr3R 14278419 intron trx - chr3R 14278485 intron trx - chr3R 14278551 intron trx - chr3R_8_14275001 chr3R_14275001 RAL-321 2607 chr3R 14281062 14281107 chr3R 14281159 14281204 13 97 24.0 24.5 24.2 0.5 142 chr3R 14281062 intron trx - chr3R 14281133 intron trx - chr3R 14281204 intron trx - chr3R_13_14280001 chr3R_14280001 RAL-321 2608 chr3R 14295521 14295560 chr3R 14295618 14295663 13 101 10.0 17.5 13.8 0.9 142 chr3R 14295521 intron CG12207 + chr3R 14295592 intron CG12207 + chr3R 14295663 intron CG12207 + chr3R_13_14295001 chr3R_14295001 RAL-321 2609 chr3R 14313613 14313729 chr3R 14313724 14313835 8 110 4.5 3.5 4.0 1.6 222 chr3R 14313613 intron CG31321 + chr3R 14313724 intron CG31321 + chr3R 14313835 exon CG31321 + chr3R_8_14310001 chr3R_14310001 RAL-321 2610 chr3R 14325367 14325415 chr3R 14325476 14325515 12 107 11.5 8.5 10.0 1.1 148 chr3R 14325367 exon Afti - chr3R 14325441 exon Afti - chr3R 14325515 exon Afti - chr3R_12_14325001 chr3R_14325001 RAL-321 2611 chr3R 14363722 14363751 chr3R 14363823 14363850 6 100 19.0 22.0 20.5 0.3 128 chr3R 14363722 intron NK7.1 - chr3R 14363786 intron NK7.1 - chr3R 14363850 intron NK7.1 - chr3R_6_14360001 chr3R_14360001 RAL-321 2612 chr3R 14364049 14364083 chr3R 14364146 14364176 8 96 15.5 17.5 16.5 0.5 127 chr3R 14364049 intron NK7.1 - chr3R 14364112 intron NK7.1 - chr3R 14364176 intron NK7.1 - chr3R_8_14360001 chr3R_14360001 RAL-321 2613 chr3R 14384537 14384545 chr3R 14384663 14384671 7 126 17.5 9.5 13.5 0.5 134 chr3R 14384537 intergenic not near genes chr3R 14384604 intergenic not near genes chr3R 14384671 intergenic not near genes chr3R_7_14380001 chr3R_14380001 RAL-321 2614 chr3R 14524527 14524547 chr3R 14524637 14524657 6 110 12.5 24.0 18.2 0.3 130 chr3R 14524527 intron Pde6 - chr3R 14524592 intron Pde6 - chr3R 14524657 intron Pde6 - chr3R_6_14520001 chr3R_14520001 RAL-321 2615 chr3R 14527387 14527411 chr3R 14527484 14527493 9 93 8.0 9.5 8.8 0.9 106 chr3R 14527387 intron Pde6 - chr3R 14527440 intron Pde6 - chr3R 14527493 intron Pde6 - chr3R_9_14525001 chr3R_14525001 RAL-321 2616 chr3R 14546042 14546073 chr3R 14546117 14546170 18 94 4.0 0.0 2.0 6.0 128 chr3R 14546042 intron Pde6 - chr3R 14546106 intron Pde6 - chr3R 14546170 intron Pde6 - chr3R_18_14545001 chr3R_14545001 RAL-321 2617 chr3R 14556562 14556591 chr3R 14556673 14556702 16 111 11.5 3.0 7.2 2.0 140 chr3R 14556562 intron Pde6 - chr3R 14556632 intron Pde6 - chr3R 14556702 intron Pde6 - chr3R_16_14555001 chr3R_14555001 RAL-321 2618 chr3R 14608454 14608477 chr3R 14608566 14608589 9 112 2.0 9.5 5.8 1.3 135 chr3R 14608454 intergenic stumps + chr3R 14608522 intergenic stumps + chr3R 14608589 intergenic not near genes chr3R_9_14605001 chr3R_14605001 RAL-321 2619 chr3R 14688132 14688141 chr3R 14688233 14688242 5 101 13.5 10.5 12.0 0.4 110 chr3R 14688132 intron Meltrin - chr3R 14688187 intron Meltrin - chr3R 14688242 intron Meltrin - chr3R_5_14685001 chr3R_14685001 RAL-321 2620 chr3R 14704372 14704407 chr3R 14704469 14704504 9 97 19.5 18.5 19.0 0.5 132 chr3R 14704372 intron kibra - chr3R 14704438 intron kibra - chr3R 14704504 intron kibra - chr3R_9_14700001 chr3R_14700001 RAL-321 2621 chr3R 14709682 14709718 chr3R 14709813 14709849 6 123 21.0 22.5 21.8 0.3 167 chr3R 14709682 intron kibra - chr3R 14709766 intron kibra - chr3R 14709849 intron kibra - chr3R_6_14705001 chr3R_14705001 RAL-321 2622 chr3R 14726507 14726534 chr3R 14726629 14726659 6 123 19.5 21.0 20.2 0.3 152 chr3R 14726507 intron CG7530 - chr3R 14726583 intron CG7530 - chr3R 14726659 intron CG7530 - chr3R_6_14725001 chr3R_14725001 RAL-321 2623 chr3R 14764568 14764582 chr3R 14764670 14764702 5 116 9.5 5.0 7.2 0.6 134 chr3R 14764568 intron jvl + chr3R 14764635 intron jvl + chr3R 14764702 intron jvl + chr3R_5_14760001 chr3R_14760001 RAL-321 2624 chr3R 14840942 14840972 chr3R 14841048 14841078 11 104 14.5 16.0 15.2 0.7 136 chr3R 14840942 intron btsz - chr3R 14841010 intron btsz - chr3R 14841078 intron btsz - chr3R_11_14840001 chr3R_14840001 RAL-321 2625 chr3R 14842546 14842590 chr3R 14842650 14842694 6 100 16.5 15.5 16.0 0.4 148 chr3R 14842546 intron btsz - chr3R 14842620 intron btsz - chr3R 14842694 intron btsz - chr3R_6_14840001 chr3R_14840001 RAL-321 2626 chr3R 14879026 14879072 chr3R 14879130 14879176 6 104 26.0 25.0 25.5 0.2 150 chr3R 14879026 intergenic CG3631 + chr3R 14879101 intergenic CG3631 + chr3R 14879176 intergenic CG3631 + chr3R_6_14875001 chr3R_14875001 RAL-321 2627 chr3R 14970809 14970853 chr3R 14970924 14970958 5 113 18.0 20.0 19.0 0.2 149 chr3R 14970809 intergenic not near genes chr3R 14970884 intergenic not near genes chr3R 14970958 intergenic not near genes chr3R_5_14970001 chr3R_14970001 RAL-321 2628 chr3R 14971331 14971369 chr3R 14971442 14971491 9 119 13.0 15.5 14.2 0.6 160 chr3R 14971331 intergenic not near genes chr3R 14971411 intergenic not near genes chr3R 14971491 intergenic not near genes chr3R_9_14970001 chr3R_14970001 RAL-321 2629 chr3R 14975326 14975329 chr3R 18456443 18456446 4 3481118 26.5 14.5 20.5 0.2 3481120 chr3R 14975326 intergenic not near genes chr3R 16715886 intron Ubx - chr3R 18456446 intron fru - chr3R_4_16715001 chr3R_16715001 RAL-321 2630 chr3R 14979049 14979090 chr3R 14979148 14979150 5 87 18.5 16.5 17.5 0.3 101 chr3R 14979049 intergenic not near genes chr3R 14979100 intergenic not near genes chr3R 14979150 intergenic not near genes chr3R_5_14975001 chr3R_14975001 RAL-321 2631 chr3R 14982276 14982291 chr3R 14982717 14982733 7 442 18.0 15.5 16.8 0.4 457 chr3R 14982276 intergenic not near genes chr3R 14982504 intergenic not near genes chr3R 14982733 intergenic not near genes chr3R_7_14980001 chr3R_14980001 RAL-321 2632 chr3R 15009139 15009171 chr3R 15009241 15009287 10 108 8.5 12.5 10.5 0.9 148 chr3R 15009139 intergenic not near genes chr3R 15009213 intergenic not near genes chr3R 15009287 intergenic not near genes chr3R_10_15005001 chr3R_15005001 RAL-321 2633 chr3R 15041400 15041435 chr3R 15045204 15045223 Doc 9 3799 3.0 8.0 5.5 1.4 3823 chr3R 15041400 intergenic not near genes chr3R 15043312 intergenic not near genes chr3R 15045223 intergenic not near genes chr3R_9_15040001 chr3R_15040001 RAL-321 2634 chr3R 15059270 15059481 chr3R 15059501 15059588 BS 5 157 0.0 0.0 0.0 5.0 318 chr3R 15059270 intron dpr9 - chr3R 15059429 intron dpr9 - chr3R 15059588 intron dpr9 - chr3R_5_15055001 chr3R_15055001 RAL-321 2635 chr3R 15071167 15071218 chr3R 15071312 15071363 17 144 14.5 17.5 16.0 1.0 196 chr3R 15071167 intron dpr9 - chr3R 15071265 intron dpr9 - chr3R 15071363 intron dpr9 - chr3R_17_15070001 chr3R_15070001 RAL-321 2636 chr3R 15079789 15079827 chr3R 15080050 15080085 pogo 12 259 9.5 0.0 4.8 2.1 296 chr3R 15079789 3` UTR CG6966 - chr3R 15079937 3` UTR CG6966 - chr3R 15080085 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-321 2637 chr3R 15088075 15088083 chr3R 15088170 15088201 5 107 18.5 9.0 13.8 0.3 126 chr3R 15088075 intron CG6966 - chr3R 15088138 intron CG6966 - chr3R 15088201 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-321 2638 chr3R 15102477 15102527 chr3R 15109754 15109802 412 20 7275 9.0 6.0 7.5 2.4 7325 chr3R 15102477 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109802 intron CG42788 - chr3R_20_15105001 chr3R_15105001 RAL-321 2639 chr3R 15114900 15114929 chr3R 15114996 15115025 6 96 21.5 20.0 20.8 0.3 125 chr3R 15114900 intron CG42788 - chr3R 15114962 intron CG42788 - chr3R 15115025 intron CG42788 - chr3R_6_15110001 chr3R_15110001 RAL-321 2640 chr3R 15132045 15132082 chr3R 15135124 15135162 Juan 16 3079 8.0 14.0 11.0 1.3 3117 chr3R 15132045 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135162 3` UTR CG6912 - chr3R_16_15130001 chr3R_15130001 RAL-321 2641 chr3R 15156195 15156244 chr3R 15156362 15156411 19 167 3.5 0.5 2.0 6.3 216 chr3R 15156195 intron Gyc88E + chr3R 15156303 intron Gyc88E + chr3R 15156411 intron Gyc88E + chr3R_19_15155001 chr3R_15155001 RAL-321 2642 chr3R 15160545 15160592 chr3R 15160663 15160710 22 118 6.0 4.5 5.2 3.5 165 chr3R 15160545 intron Gyc88E + chr3R 15160628 intron Gyc88E + chr3R 15160710 intron Gyc88E + chr3R_22_15160001 chr3R_15160001 RAL-321 2643 chr3R 15162529 15162552 chr3R 15167316 15167339 F-element 7 4786 15.5 6.5 11.0 0.6 4810 chr3R 15162529 intron Gyc88E + chr3R 15164934 intron Gyc88E + chr3R 15167339 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-321 2644 chr3R 15162555 15162578 chr3R 15167312 15167333 F-element 9 4779 10.5 6.5 8.5 0.9 4778 chr3R 15162555 intron Gyc88E + chr3R 15164944 intron Gyc88E + chr3R 15167333 intron Gyc88E + chr3R_9_15160001 chr3R_15160001 RAL-321 2645 chr3R 15180891 15180907 chr3R 15180989 15181003 8 104 13.5 0.0 6.8 1.0 112 chr3R 15180891 intron Gyc88E + chr3R 15180947 intron Gyc88E + chr3R 15181003 intron Gyc88E + chr3R_8_15180001 chr3R_15180001 RAL-321 2646 chr3R 15184517 15184570 chr3R 15184619 15184666 35 99 8.0 7.0 7.5 4.1 149 chr3R 15184517 intron Gyc88E + chr3R 15184592 intron Gyc88E + chr3R 15184666 intron Gyc88E + chr3R_35_15180001 chr3R_15180001 RAL-321 2647 chr3R 15286987 15286988 chr3R 21907534 21907536 4 6620548 26.0 30.0 28.0 0.1 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-321 2648 chr3R 15302499 15302532 chr3R 15302597 15302630 8 97 19.5 18.0 18.8 0.4 131 chr3R 15302499 intron Tm1 + chr3R 15302564 intron Tm1 + chr3R 15302630 intron Tm1 + chr3R_8_15300001 chr3R_15300001 RAL-321 2649 chr3R 15407040 15407092 chr3R 15407150 15407202 4 109 20.0 16.5 18.2 0.2 162 chr3R 15407040 5` UTR CG6125 - chr3R 15407121 intergenic CG6125 - chr3R 15407202 intergenic CG6125 - chr3R_4_15405001 chr3R_15405001 RAL-321 2650 chr3R 15416239 15416280 chr3R 15416339 15416380 11 99 26.0 25.5 25.8 0.4 141 chr3R 15416239 3` UTR Atx2 + chr3R 15416310 3` UTR Atx2 + chr3R 15416380 3` UTR Atx2 + chr3R_11_15415001 chr3R_15415001 RAL-321 2651 chr3R 15445890 15445904 chr3R 15445995 15446009 6 105 4.5 0.0 2.2 1.9 119 chr3R 15445890 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446009 intron AdamTS-A - chr3R_6_15445001 chr3R_15445001 RAL-321 2652 chr3R 15578068 15578091 chr3R 15578177 15578200 7 109 17.0 12.5 14.8 0.4 132 chr3R 15578068 intergenic not near genes chr3R 15578134 intergenic not near genes chr3R 15578200 intergenic not near genes chr3R_7_15575001 chr3R_15575001 RAL-321 2653 chr3R 15592874 15592922 chr3R 15592978 15593026 14 104 7.0 11.5 9.2 1.4 152 chr3R 15592874 intergenic not near genes chr3R 15592950 intergenic not near genes chr3R 15593026 intergenic not near genes chr3R_14_15590001 chr3R_15590001 RAL-321 2654 chr3R 15594654 15594674 chr3R 15594757 15594777 9 103 0.0 10.5 5.2 1.5 123 chr3R 15594654 intergenic not near genes chr3R 15594716 intergenic not near genes chr3R 15594777 intergenic not near genes chr3R_9_15590001 chr3R_15590001 RAL-321 2655 chr3R 15601153 15601195 chr3R 15608695 15608737 412 17 7541 7.0 6.5 6.8 2.2 7584 chr3R 15601153 intergenic not near genes chr3R 15604945 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_17_15600001 chr3R_15600001 RAL-321 2656 chr3R 15618711 15618759 chr3R 15626205 15626253 blood 14 7494 3.0 9.0 6.0 2.0 7542 chr3R 15618711 intergenic not near genes chr3R 15622482 intergenic not near genes chr3R 15626253 intergenic not near genes chr3R_14_15620001 chr3R_15620001 RAL-321 2657 chr3R 15639323 15639367 chr3R 15639628 15639673 5 306 18.0 21.5 19.8 0.2 350 chr3R 15639323 intergenic not near genes chr3R 15639498 intergenic not near genes chr3R 15639673 intergenic not near genes chr3R_5_15635001 chr3R_15635001 RAL-321 2658 chr3R 15646775 15646800 chr3R 15646873 15646903 13 103 15.0 14.5 14.8 0.8 128 chr3R 15646775 intergenic not near genes chr3R 15646839 intergenic not near genes chr3R 15646903 intergenic not near genes chr3R_13_15645001 chr3R_15645001 RAL-321 2659 chr3R 15691161 15691331 chr3R 15691286 15691438 35 115 0.0 0.0 0.0 35.0 277 chr3R 15691161 intergenic not near genes chr3R 15691300 intergenic not near genes chr3R 15691438 intergenic not near genes chr3R_35_15690001 chr3R_15690001 RAL-321 2660 chr3R 15734159 15734211 chr3R 15734262 15734284 9 99 6.5 3.0 4.8 1.6 125 chr3R 15734159 intergenic not near genes chr3R 15734222 intergenic not near genes chr3R 15734284 intergenic not near genes chr3R_9_15730001 chr3R_15730001 RAL-321 2661 chr3R 15735225 15735235 chr3R 15739965 15739975 F-element 7 4740 4.0 6.5 5.2 1.1 4750 chr3R 15735225 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739975 intergenic not near genes chr3R_7_15735001 chr3R_15735001 RAL-321 2662 chr3R 15752267 15752302 chr3R 15752375 15752410 4 106 16.0 12.5 14.2 0.3 143 chr3R 15752267 intergenic not near genes chr3R 15752338 intergenic not near genes chr3R 15752410 intergenic not near genes chr3R_4_15750001 chr3R_15750001 RAL-321 2663 chr3R 15864248 15864290 chr3R 15864360 15864364 5 85 2.0 13.0 7.5 0.6 116 chr3R 15864248 intron CG31183 - chr3R 15864306 intron CG31183 - chr3R 15864364 intron CG31183 - chr3R_5_15860001 chr3R_15860001 RAL-321 2664 chr3R 15878081 15878101 chr3R 15878189 15878209 5 108 12.0 11.0 11.5 0.4 128 chr3R 15878081 intergenic not near genes chr3R 15878145 intergenic not near genes chr3R 15878209 intergenic not near genes chr3R_5_15875001 chr3R_15875001 RAL-321 2665 chr3R 15885714 15885760 chr3R 15885960 15886006 22 245 16.5 14.0 15.2 1.4 292 chr3R 15885714 intergenic not near genes chr3R 15885860 intergenic not near genes chr3R 15886006 intergenic not near genes chr3R_22_15885001 chr3R_15885001 RAL-321 2666 chr3R 15891648 15891679 chr3R 15892060 15892085 5 411 20.5 22.0 21.2 0.2 437 chr3R 15891648 intron CG14877 - chr3R 15891866 intron CG14877 - chr3R 15892085 intron CG14877 - chr3R_5_15890001 chr3R_15890001 RAL-321 2667 chr3R 15892637 15892687 chr3R 15892738 15892788 20 100 11.0 12.5 11.8 1.6 151 chr3R 15892637 intron CG14877 - chr3R 15892712 intron CG14877 - chr3R 15892788 intron CG14877 - chr3R_20_15890001 chr3R_15890001 RAL-321 2668 chr3R 15924182 15924222 chr3R 15924291 15924331 5 105 13.0 17.5 15.2 0.3 149 chr3R 15924182 intron CG4221 + chr3R 15924256 intron CG4221 + chr3R 15924331 intron CG4221 + chr3R_5_15920001 chr3R_15920001 RAL-321 2669 chr3R 15937406 15937433 chr3R 15937513 15937529 4 100 18.0 14.0 16.0 0.2 123 chr3R 15937406 intron Sap47 + chr3R 15937468 intron Sap47 + chr3R 15937529 intron Sap47 + chr3R_4_15935001 chr3R_15935001 RAL-321 2670 chr3R 16048842 16048862 chr3R 16048952 16048972 5 103 12.0 10.0 11.0 0.4 130 chr3R 16048842 intron ird5 - chr3R 16048907 intron ird5 - chr3R 16048972 intron ird5 - chr3R_5_16045001 chr3R_16045001 RAL-321 2671 chr3R 16048864 16048879 chr3R 16048949 16048974 8 98 10.5 9.0 9.8 0.7 110 chr3R 16048864 intron ird5 - chr3R 16048919 intron ird5 - chr3R 16048974 intron ird5 - chr3R_8_16045001 chr3R_16045001 RAL-321 2672 chr3R 16073429 16073474 chr3R 16073553 16073598 8 124 11.5 12.0 11.8 0.6 169 chr3R 16073429 intron Mhcl - chr3R 16073514 intron Mhcl - chr3R 16073598 intron Mhcl - chr3R_8_16070001 chr3R_16070001 RAL-321 2673 chr3R 16167805 16167832 chr3R 16167919 16167947 11 115 12.0 14.0 13.0 0.8 142 chr3R 16167805 intron CG6006 + chr3R 16167876 intron CG6006 + chr3R 16167947 exon CG6006 + chr3R_11_16165001 chr3R_16165001 RAL-321 2674 chr3R 16189389 16189441 chr3R 16189812 16189864 invader4 30 421 5.5 3.0 4.2 5.8 475 chr3R 16189389 intron sra + chr3R 16189626 intron sra + chr3R 16189864 intron sra + chr3R_30_16185001 chr3R_16185001 RAL-321 2675 chr3R 16210821 16210834 chr3R 16210927 16210940 4 106 27.5 22.0 24.8 0.2 119 chr3R 16210821 intergenic not near genes chr3R 16210880 intergenic not near genes chr3R 16210940 intergenic not near genes chr3R_4_16210001 chr3R_16210001 RAL-321 2676 chr3R 16225070 16225115 chr3R 16225175 16225220 17 104 6.0 5.5 5.8 2.5 150 chr3R 16225070 intergenic not near genes chr3R 16225145 intergenic not near genes chr3R 16225220 intergenic tara + chr3R_17_16225001 chr3R_16225001 RAL-321 2677 chr3R 16246509 16246552 chr3R 16246605 16246648 4 94 22.0 20.5 21.2 0.2 139 chr3R 16246509 intron tara + chr3R 16246578 intron tara + chr3R 16246648 intron tara + chr3R_4_16245001 chr3R_16245001 RAL-321 2678 chr3R 16255683 16255707 chr3R 16255784 16255808 7 101 25.0 17.5 21.2 0.3 125 chr3R 16255683 intron tara + chr3R 16255746 intron tara + chr3R 16255808 intron tara + chr3R_7_16255001 chr3R_16255001 RAL-321 2679 chr3R 16332764 16332805 chr3R 16333130 16333176 18 363 15.5 9.0 12.2 1.4 412 chr3R 16332764 intron Sulf1 - chr3R 16332970 intron Sulf1 - chr3R 16333176 intron Sulf1 - chr3R_18_16330001 chr3R_16330001 RAL-321 2680 chr3R 16368451 16368477 chr3R 16368543 16368576 4 97 26.0 29.5 27.8 0.1 125 chr3R 16368451 intergenic CG14880 -,CG10317 - chr3R 16368514 intergenic CG14880 -,CG10317 - chr3R 16368576 intergenic CG14880 -,CG10317 - chr3R_4_16365001 chr3R_16365001 RAL-321 2681 chr3R 16374281 16374328 chr3R 16374418 16374452 18 136 7.5 6.0 6.8 2.3 171 chr3R 16374281 intergenic ss - chr3R 16374366 intergenic ss - chr3R 16374452 3` UTR ss - chr3R_18_16370001 chr3R_16370001 RAL-321 2682 chr3R 16472572 16472585 chr3R 16472658 16472670 6 90 10.0 15.5 12.8 0.4 98 chr3R 16472572 intergenic Gyc-89Da + chr3R 16472621 5` UTR Gyc-89Da + chr3R 16472670 5` UTR Gyc-89Da + chr3R_6_16470001 chr3R_16470001 RAL-321 2683 chr3R 16472587 16472599 chr3R 16472657 16472657 5 72 13.5 16.0 14.8 0.3 70 chr3R 16472587 intergenic Gyc-89Da + chr3R 16472622 5` UTR Gyc-89Da + chr3R 16472657 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 RAL-321 2684 chr3R 16582911 16582918 chr3R 16582994 16583017 5 94 8.0 4.5 6.2 0.7 106 chr3R 16582911 intron Scp2 - chr3R 16582964 intron Scp2 - chr3R 16583017 intron Scp2 - chr3R_5_16580001 chr3R_16580001 RAL-321 2685 chr3R 16620368 16620401 chr3R 16620528 16620561 12 160 6.5 8.0 7.2 1.5 193 chr3R 16620368 intergenic CG14893 +,CG17560 + chr3R 16620464 intergenic CG14893 + chr3R 16620561 intergenic CG14893 + chr3R_12_16620001 chr3R_16620001 RAL-321 2686 chr3R 16633672 16633684 chr3R 16633792 16633804 8 119 15.0 17.5 16.2 0.5 132 chr3R 16633672 intron Fas1 + chr3R 16633738 intron Fas1 + chr3R 16633804 intron Fas1 + chr3R_8_16630001 chr3R_16630001 RAL-321 2687 chr3R 16731910 16731942 chr3R 16732010 16732042 10 95 4.0 3.0 3.5 2.2 132 chr3R 16731910 intron Ubx - chr3R 16731976 intron Ubx - chr3R 16732042 intron Ubx - chr3R_10_16730001 chr3R_16730001 RAL-321 2688 chr3R 16756298 16756354 chr3R 16762509 16762543 diver 6 6207 4.5 2.5 3.5 1.3 6245 chr3R 16756298 intron bxd - chr3R 16759420 intron bxd - chr3R 16762543 intron bxd - chr3R_6_16755001 chr3R_16755001 RAL-321 2689 chr3R 16790107 16790120 chr3R 16790264 16790277 8 156 19.0 11.0 15.0 0.5 170 chr3R 16790107 intergenic Glut3 + chr3R 16790192 intergenic Glut3 + chr3R 16790277 intergenic Glut3 + chr3R_8_16790001 chr3R_16790001 RAL-321 2690 chr3R 16790124 16790150 chr3R 16790261 16790307 9 155 11.0 10.5 10.8 0.8 183 chr3R 16790124 intergenic Glut3 + chr3R 16790216 intergenic Glut3 + chr3R 16790307 intergenic Glut3 + chr3R_9_16790001 chr3R_16790001 RAL-321 2691 chr3R 16802100 16802134 chr3R 16802201 16802235 10 100 16.5 3.5 10.0 0.9 135 chr3R 16802100 intergenic CR45751 + chr3R 16802168 intergenic CR45751 + chr3R 16802235 intergenic CR45751 + chr3R_10_16800001 chr3R_16800001 RAL-321 2692 chr3R 16816301 16816349 chr3R 16816493 16816540 18 188 10.5 11.0 10.8 1.5 239 chr3R 16816301 intron abd-A - chr3R 16816420 intron abd-A - chr3R 16816540 intron abd-A - chr3R_18_16815001 chr3R_16815001 RAL-321 2693 chr3R 16820236 16820278 chr3R 16820350 16820392 14 114 10.5 13.0 11.8 1.1 156 chr3R 16820236 intron abd-A - chr3R 16820314 intron abd-A - chr3R 16820392 intron abd-A - chr3R_14_16820001 chr3R_16820001 RAL-321 2694 chr3R 16921813 16921862 chr3R 16921916 16921966 16 104 12.5 13.0 12.8 1.2 153 chr3R 16921813 intron iab-8 - chr3R 16921890 intron iab-8 - chr3R 16921966 intron iab-8 - chr3R_16_16920001 chr3R_16920001 RAL-321 2695 chr3R 17015020 17015068 chr3R 17015158 17015206 23 138 15.5 13.0 14.2 1.5 186 chr3R 17015020 intron Pxd + chr3R 17015113 intron Pxd + chr3R 17015206 intron Pxd + chr3R_23_17015001 chr3R_17015001 RAL-321 2696 chr3R 17023950 17024000 chr3R 17024123 17024173 11 172 10.0 9.0 9.5 1.0 223 chr3R 17023950 intron Pxd + chr3R 17024062 intron Pxd + chr3R 17024173 intron Pxd + chr3R_11_17020001 chr3R_17020001 RAL-321 2697 chr3R 17027590 17027643 chr3R 17030920 17030973 12 3330 40.0 36.0 38.0 0.3 3383 chr3R 17027590 intron Pxd + chr3R 17029282 exon CG5225 + chr3R 17030973 intergenic CG5225 + chr3R_12_17025001 chr3R_17025001 RAL-321 2698 chr3R 17194390 17194430 chr3R 17194489 17194529 12 98 7.0 8.0 7.5 1.4 139 chr3R 17194390 intron Mur89F - chr3R 17194460 intron Mur89F - chr3R 17194529 intron Mur89F - chr3R_12_17190001 chr3R_17190001 RAL-321 2699 chr3R 17209693 17209706 chr3R 17209801 17209814 7 108 17.0 20.5 18.8 0.4 121 chr3R 17209693 intergenic not near genes chr3R 17209754 intergenic not near genes chr3R 17209814 intergenic not near genes chr3R_7_17205001 chr3R_17205001 RAL-321 2700 chr3R 17294652 17294700 chr3R 17295100 17295153 BS 11 448 3.5 0.0 1.8 3.9 501 chr3R 17294652 intergenic not near genes chr3R 17294902 intergenic not near genes chr3R 17295153 intergenic not near genes chr3R_11_17290001 chr3R_17290001 RAL-321 2701 chr3R 17346247 17346247 chr3R 21907534 21907535 5 4561287 29.0 30.0 29.5 0.2 4561288 chr3R 17346247 intron beat-IIa - chr3R 19626891 intron CG6231 - chr3R 21907535 intergenic CG6678 + chr3R_5_19625001 chr3R_19625001 RAL-321 2702 chr3R 17346672 17346713 chr3R 17348255 17348296 F-element 9 1583 8.5 12.5 10.5 0.8 1624 chr3R 17346672 intron beat-IIa - chr3R 17347484 intron beat-IIa - chr3R 17348296 intron beat-IIa - chr3R_9_17345001 chr3R_17345001 RAL-321 2703 chr3R 17353433 17353455 chr3R 17353530 17353552 5 97 19.0 13.5 16.2 0.3 119 chr3R 17353433 intron beat-IIa - chr3R 17353492 intron beat-IIa - chr3R 17353552 intron beat-IIa - chr3R_5_17350001 chr3R_17350001 RAL-321 2704 chr3R 17353456 17353482 chr3R 17353528 17353579 8 94 14.5 13.0 13.8 0.5 123 chr3R 17353456 intron beat-IIa - chr3R 17353518 intron beat-IIa - chr3R 17353579 intron beat-IIa - chr3R_8_17350001 chr3R_17350001 RAL-321 2705 chr3R 17391243 17391278 chr3R 17391354 17391389 8 107 20.5 24.0 22.2 0.3 146 chr3R 17391243 5` UTR Brf - chr3R 17391316 5` UTR Brf - chr3R 17391389 intergenic Brf -,CR44160 -,sds22 + chr3R_8_17390001 chr3R_17390001 RAL-321 2706 chr3R 17406982 17407016 chr3R 17407104 17407138 5 122 25.5 22.5 24.0 0.2 156 chr3R 17406982 intron CG42798 + chr3R 17407060 5` UTR CG42798 + chr3R 17407138 exon CG42798 + chr3R_5_17405001 chr3R_17405001 RAL-321 2707 chr3R 17461179 17461232 chr3R 17461281 17461334 27 101 6.0 4.0 5.0 4.5 155 chr3R 17461179 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461334 intergenic not near genes chr3R_27_17460001 chr3R_17460001 RAL-321 2708 chr3R 17467477 17467521 chr3R 17467582 17467619 15 98 5.0 6.0 5.5 2.3 142 chr3R 17467477 intergenic not near genes chr3R 17467548 intergenic not near genes chr3R 17467619 intergenic not near genes chr3R_15_17465001 chr3R_17465001 RAL-321 2709 chr3R 17490785 17490804 chr3R 17490886 17490906 5 102 26.0 24.5 25.2 0.2 121 chr3R 17490785 intron Dscam3 - chr3R 17490846 intron Dscam3 - chr3R 17490906 intron Dscam3 - chr3R_5_17490001 chr3R_17490001 RAL-321 2710 chr3R 17568637 17568660 chr3R 17568734 17568752 4 95 13.5 16.0 14.8 0.3 115 chr3R 17568637 3` UTR Hmx + chr3R 17568694 3` UTR Hmx + chr3R 17568752 3` UTR Hmx + chr3R_4_17565001 chr3R_17565001 RAL-321 2711 chr3R 17591268 17591303 chr3R 17591724 17591752 F-element 14 453 6.5 6.5 6.5 1.9 484 chr3R 17591268 intergenic not near genes chr3R 17591510 intergenic not near genes chr3R 17591752 intergenic not near genes chr3R_14_17590001 chr3R_17590001 RAL-321 2712 chr3R 17634357 17634408 chr3R 17634452 17634497 24 94 12.5 12.0 12.2 1.8 140 chr3R 17634357 intron CG43175 + chr3R 17634427 intron CG43175 + chr3R 17634497 intron CG43175 + chr3R_24_17630001 chr3R_17630001 RAL-321 2713 chr3R 17645685 17645723 chr3R 17645835 17645873 15 150 10.0 9.0 9.5 1.4 188 chr3R 17645685 intergenic CG43175 + chr3R 17645779 intergenic not near genes chr3R 17645873 intergenic not near genes chr3R_15_17645001 chr3R_17645001 RAL-321 2714 chr3R 17653060 17653109 chr3R 17653170 17653191 5 101 18.0 14.5 16.2 0.3 131 chr3R 17653060 intron,intron CG14322 +,CR45223 - chr3R 17653126 intron,intron CG14322 +,CR45223 - chr3R 17653191 intron,intron CG14322 +,CR45223 - chr3R_5_17650001 chr3R_17650001 RAL-321 2715 chr3R 17701369 17701380 chr3R 17701472 17701483 4 100 12.0 8.0 10.0 0.4 114 chr3R 17701369 intron osa - chr3R 17701426 intron osa - chr3R 17701483 intron osa - chr3R_4_17700001 chr3R_17700001 RAL-321 2716 chr3R 17723268 17723275 chr3R 17723387 17723388 6 118 0.0 20.0 10.0 0.5 120 chr3R 17723268 intergenic Pxt + chr3R 17723328 intergenic Pxt + chr3R 17723388 intergenic Pxt + chr3R_6_17720001 chr3R_17720001 RAL-321 2717 chr3R 17728859 17728903 chr3R 17728972 17729016 9 112 7.0 14.0 10.5 0.8 157 chr3R 17728859 intron Lgr1 + chr3R 17728938 intron Lgr1 + chr3R 17729016 intron Lgr1 + chr3R_9_17725001 chr3R_17725001 RAL-321 2718 chr3R 17734119 17734129 chr3R 17734216 17734223 7 102 4.5 7.5 6.0 1.0 104 chr3R 17734119 3` UTR CG14321 + chr3R 17734171 3` UTR CG14321 + chr3R 17734223 3` UTR CG14321 + chr3R_7_17730001 chr3R_17730001 RAL-321 2719 chr3R 17734824 17734860 chr3R 17734957 17734993 18 133 6.0 5.5 5.8 2.6 169 chr3R 17734824 intergenic CG14321 + chr3R 17734908 intergenic not near genes chr3R 17734993 intergenic not near genes chr3R_18_17730001 chr3R_17730001 RAL-321 2720 chr3R 17767335 17767372 chr3R 17767468 17767475 5 129 6.0 11.5 8.8 0.5 140 chr3R 17767335 intergenic not near genes chr3R 17767405 intergenic not near genes chr3R 17767475 intergenic not near genes chr3R_5_17765001 chr3R_17765001 RAL-321 2721 chr3R 17773378 17773388 chr3R 17773478 17773488 5 100 13.0 11.0 12.0 0.4 110 chr3R 17773378 intron CG43102 - chr3R 17773433 intron CG43102 - chr3R 17773488 exon CG43102 - chr3R_5_17770001 chr3R_17770001 RAL-321 2722 chr3R 17823184 17823227 chr3R 17823281 17823303 25 96 7.5 9.0 8.2 2.7 119 chr3R 17823184 intron tinc + chr3R 17823244 intron tinc + chr3R 17823303 intron tinc + chr3R_25_17820001 chr3R_17820001 RAL-321 2723 chr3R 17845101 17845215 chr3R 17845204 17845312 9 97 0.0 0.5 0.2 7.5 211 chr3R 17845101 intron tinc + chr3R 17845206 intron tinc + chr3R 17845312 intron tinc + chr3R_9_17845001 chr3R_17845001 RAL-321 2724 chr3R 17854763 17854794 chr3R 17854861 17854871 5 94 17.5 20.0 18.8 0.3 108 chr3R 17854763 intron tinc + chr3R 17854817 intron tinc + chr3R 17854871 intron tinc + chr3R_5_17850001 chr3R_17850001 RAL-321 2725 chr3R 17856023 17856038 chr3R 17856143 17856158 4 118 18.0 9.0 13.5 0.3 135 chr3R 17856023 intron tinc + chr3R 17856090 intron tinc + chr3R 17856158 intron tinc + chr3R_4_17855001 chr3R_17855001 RAL-321 2726 chr3R 17891761 17891794 chr3R 17891890 17891923 5 129 24.0 26.5 25.2 0.2 162 chr3R 17891761 intron Rim - chr3R 17891842 intron Rim - chr3R 17891923 intron Rim - chr3R_5_17890001 chr3R_17890001 RAL-321 2727 chr3R 17895323 17895369 chr3R 17895432 17895480 7 110 26.5 25.5 26.0 0.3 157 chr3R 17895323 intron Rim - chr3R 17895402 intron Rim - chr3R 17895480 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-321 2728 chr3R 17899069 17899107 chr3R 17899167 17899185 10 96 11.0 7.5 9.2 1.0 116 chr3R 17899069 intron Rim - chr3R 17899127 intron Rim - chr3R 17899185 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-321 2729 chr3R 17925847 17925875 chr3R 17927319 17927362 hobo 15 1483 7.0 7.0 7.0 1.9 1515 chr3R 17925847 intron cpo + chr3R 17926604 intron cpo + chr3R 17927362 intron cpo + chr3R_15_17925001 chr3R_17925001 RAL-321 2730 chr3R 17964235 17964260 chr3R 17964361 17964386 4 126 20.0 20.0 20.0 0.2 151 chr3R 17964235 intron cpo + chr3R 17964310 intron cpo + chr3R 17964386 intron cpo + chr3R_4_17960001 chr3R_17960001 RAL-321 2731 chr3R 17983195 17983215 chr3R 17983291 17983311 6 96 14.5 3.5 9.0 0.6 116 chr3R 17983195 intron cpo + chr3R 17983253 intron cpo + chr3R 17983311 intron cpo + chr3R_6_17980001 chr3R_17980001 RAL-321 2732 chr3R 17983217 17983246 chr3R 17983286 17983328 4 84 9.0 4.0 6.5 0.5 111 chr3R 17983217 intron cpo + chr3R 17983272 intron cpo + chr3R 17983328 intron cpo + chr3R_4_17980001 chr3R_17980001 RAL-321 2733 chr3R 18012966 18012996 chr3R 18013062 18013092 11 92 4.0 4.0 4.0 2.2 126 chr3R 18012966 intron cpo + chr3R 18013029 intron cpo + chr3R 18013092 intron cpo + chr3R_11_18010001 chr3R_18010001 RAL-321 2734 chr3R 18025319 18025362 chr3R 18025420 18025463 17 101 3.0 6.5 4.8 2.9 144 chr3R 18025319 3` UTR CG7794 + chr3R 18025391 intergenic CG7794 + chr3R 18025463 intergenic CG7794 + chr3R_17_18025001 chr3R_18025001 RAL-321 2735 chr3R 18032766 18032787 chr3R 18040454 18040475 opus 9 7688 12.5 0.0 6.2 1.2 7709 chr3R 18032766 intergenic not near genes chr3R 18036620 intergenic not near genes chr3R 18040475 intergenic not near genes chr3R_9_18035001 chr3R_18035001 RAL-321 2736 chr3R 18061424 18061460 chr3R 18061536 18061572 14 111 5.5 0.0 2.8 3.7 148 chr3R 18061424 intergenic not near genes chr3R 18061498 intergenic not near genes chr3R 18061572 intergenic not near genes chr3R_14_18060001 chr3R_18060001 RAL-321 2737 chr3R 18061552 18061556 chr3R 18063146 18063150 F-element 4 1594 0.0 0.0 0.0 4.0 1598 chr3R 18061552 intergenic not near genes chr3R 18062351 intergenic not near genes chr3R 18063150 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-321 2738 chr3R 18078134 18078158 chr3R 18078233 18078257 5 93 16.0 0.0 8.0 0.6 123 chr3R 18078134 intergenic not near genes chr3R 18078196 intergenic not near genes chr3R 18078257 intergenic not near genes chr3R_5_18075001 chr3R_18075001 RAL-321 2739 chr3R 18103825 18103844 chr3R 18103928 18103947 7 103 10.0 0.0 5.0 1.2 122 chr3R 18103825 intron sr + chr3R 18103886 intron sr + chr3R 18103947 intron sr + chr3R_7_18100001 chr3R_18100001 RAL-321 2740 chr3R 18119737 18119754 chr3R 18119822 18119851 7 94 5.5 6.0 5.8 1.0 114 chr3R 18119737 intron sr + chr3R 18119794 intron sr + chr3R 18119851 intron sr + chr3R_7_18115001 chr3R_18115001 RAL-321 2741 chr3R 18122881 18122917 chr3R 18122978 18123014 12 97 11.5 14.5 13.0 0.9 133 chr3R 18122881 intron sr + chr3R 18122948 intron sr + chr3R 18123014 intron sr + chr3R_12_18120001 chr3R_18120001 RAL-321 2742 chr3R 18143539 18143590 chr3R 18143648 18143699 16 109 5.5 5.5 5.5 2.5 160 chr3R 18143539 intergenic not near genes chr3R 18143619 intergenic not near genes chr3R 18143699 intergenic not near genes chr3R_16_18140001 chr3R_18140001 RAL-321 2743 chr3R 18331763 18331776 chr3R 18333277 18333279 hopper2 7 1512 16.0 1.0 8.5 0.7 1516 chr3R 18331763 3` UTR CG15803 - chr3R 18332521 intron CG15803 - chr3R 18333279 3` UTR CG15803 - chr3R_7_18330001 chr3R_18330001 RAL-321 2744 chr3R 18335339 18335358 chr3R 18335561 18335580 6 220 3.0 0.0 1.5 2.4 241 chr3R 18335339 intron CG15803 - chr3R 18335460 intron CG15803 - chr3R 18335580 intron CG15803 - chr3R_6_18335001 chr3R_18335001 RAL-321 2745 chr3R 18352556 18352594 chr3R 18352669 18352707 20 112 6.5 5.0 5.8 2.9 151 chr3R 18352556 intron CG15803 - chr3R 18352632 intron CG15803 - chr3R 18352707 intron CG15803 - chr3R_20_18350001 chr3R_18350001 RAL-321 2746 chr3R 18352595 18352608 chr3R 18352668 18352721 10 107 3.0 5.0 4.0 2.0 126 chr3R 18352595 intron CG15803 - chr3R 18352658 intron CG15803 - chr3R 18352721 intron CG15803 - chr3R_10_18350001 chr3R_18350001 RAL-321 2747 chr3R 18379618 18379627 chr3R 18379944 18379953 7 325 11.0 7.5 9.2 0.7 335 chr3R 18379618 intron CG7675 - chr3R 18379786 intron CG7675 - chr3R 18379953 intron CG7675 - chr3R_7_18375001 chr3R_18375001 RAL-321 2748 chr3R 18379631 18379656 chr3R 18379933 18379982 9 319 7.5 7.0 7.2 1.1 351 chr3R 18379631 intron CG7675 - chr3R 18379806 intron CG7675 - chr3R 18379982 intron CG7675 - chr3R_9_18375001 chr3R_18375001 RAL-321 2749 chr3R 18394452 18394501 chr3R 18394549 18394598 25 97 6.0 7.0 6.5 3.3 146 chr3R 18394452 intron Vha100-2 - chr3R 18394525 intron Vha100-2 - chr3R 18394598 intron Vha100-2 - chr3R_25_18390001 chr3R_18390001 RAL-321 2750 chr3R 18464292 18464341 chr3R 18464450 18464500 14 159 0.0 6.5 3.2 3.3 208 chr3R 18464292 intron fru - chr3R 18464396 intron fru - chr3R 18464500 intron fru - chr3R_14_18460001 chr3R_18460001 RAL-321 2751 chr3R 18472264 18472297 chr3R 18472385 18472418 15 119 3.0 4.0 3.5 3.3 154 chr3R 18472264 intron fru - chr3R 18472341 intron fru - chr3R 18472418 intron fru - chr3R_15_18470001 chr3R_18470001 RAL-321 2752 chr3R 18473230 18473245 chr3R 18473337 18473352 5 107 0.0 0.0 0.0 5.0 122 chr3R 18473230 intron fru - chr3R 18473291 intron fru - chr3R 18473352 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-321 2753 chr3R 18498169 18498187 chr3R 18498265 18498283 7 96 6.0 5.5 5.8 1.0 114 chr3R 18498169 intron fru - chr3R 18498226 intron fru - chr3R 18498283 intron fru - chr3R_7_18495001 chr3R_18495001 RAL-321 2754 chr3R 18501584 18501623 chr3R 18501685 18501724 17 100 9.0 9.0 9.0 1.7 140 chr3R 18501584 intron fru - chr3R 18501654 intron fru - chr3R 18501724 intron fru - chr3R_17_18500001 chr3R_18500001 RAL-321 2755 chr3R 18528346 18528392 chr3R 18528453 18528499 19 103 3.0 5.5 4.2 3.7 153 chr3R 18528346 intron fru - chr3R 18528422 intron fru - chr3R 18528499 intron fru - chr3R_19_18525001 chr3R_18525001 RAL-321 2756 chr3R 18606484 18606525 chr3R 18610736 18610777 F-element 21 4252 9.0 8.0 8.5 2.2 4293 chr3R 18606484 intron,intron qin +,CG14304 - chr3R 18608630 intron,intron qin +,CG14304 - chr3R 18610777 intron,intron qin +,CG14304 - chr3R_21_18605001 chr3R_18605001 RAL-321 2757 chr3R 18617691 18617742 chr3R 18617791 18617842 18 100 3.5 7.5 5.5 2.8 151 chr3R 18617691 intron,intron qin +,CG14304 - chr3R 18617766 intron,intron qin +,CG14304 - chr3R 18617842 intron,intron qin +,CG14304 - chr3R_18_18615001 chr3R_18615001 RAL-321 2758 chr3R 18695741 18695745 chr3R 18695845 18695849 5 104 13.5 0.0 6.8 0.6 108 chr3R 18695741 3` UTR CG34282 + chr3R 18695795 intergenic CG34282 + chr3R 18695849 intergenic CG34282 + chr3R_5_18695001 chr3R_18695001 RAL-321 2759 chr3R 18766756 18766808 chr3R 18766854 18766906 26 98 5.0 7.0 6.0 3.7 150 chr3R 18766756 intron CG7720 - chr3R 18766831 intron CG7720 - chr3R 18766906 intron CG7720 - chr3R_26_18765001 chr3R_18765001 RAL-321 2760 chr3R 18781671 18781725 chr3R 18781767 18781790 15 87 3.5 4.0 3.8 3.1 119 chr3R 18781671 intron CG7720 - chr3R 18781730 intron CG7720 - chr3R 18781790 intron CG7720 - chr3R_15_18780001 chr3R_18780001 RAL-321 2761 chr3R 18785857 18785867 chr3R 18785954 18785964 6 97 19.0 8.0 13.5 0.4 107 chr3R 18785857 intron CG7720 - chr3R 18785910 intron CG7720 - chr3R 18785964 intron CG7720 - chr3R_6_18785001 chr3R_18785001 RAL-321 2762 chr3R 18785868 18785898 chr3R 18785952 18785995 15 95 8.5 8.0 8.2 1.6 127 chr3R 18785868 intron CG7720 - chr3R 18785932 intron CG7720 - chr3R 18785995 intron CG7720 - chr3R_15_18785001 chr3R_18785001 RAL-321 2763 chr3R 18791477 18791517 chr3R 18791576 18791603 9 87 4.0 1.5 2.8 2.4 126 chr3R 18791477 intron CG7720 - chr3R 18791540 intron CG7720 - chr3R 18791603 intron CG7720 - chr3R_9_18790001 chr3R_18790001 RAL-321 2764 chr3R 18792800 18792836 chr3R 18792888 18792939 5 100 6.5 0.0 3.2 1.2 139 chr3R 18792800 intron CG7720 - chr3R 18792870 intron CG7720 - chr3R 18792939 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-321 2765 chr3R 18807310 18807331 chr3R 18807407 18807428 8 95 2.5 0.0 1.2 3.6 118 chr3R 18807310 intron CG18208 - chr3R 18807369 intron CG18208 - chr3R 18807428 intron CG18208 - chr3R_8_18805001 chr3R_18805001 RAL-321 2766 chr3R 18808455 18808506 chr3R 18808552 18808603 8 91 3.0 6.0 4.5 1.5 148 chr3R 18808455 intron CG18208 - chr3R 18808529 intron CG18208 - chr3R 18808603 intron CG18208 - chr3R_8_18805001 chr3R_18805001 RAL-321 2767 chr3R 18812064 18812109 chr3R 18812162 18812194 23 96 6.0 8.0 7.0 2.9 130 chr3R 18812064 intron CG18208 - chr3R 18812129 intron CG18208 - chr3R 18812194 intron CG18208 - chr3R_23_18810001 chr3R_18810001 RAL-321 2768 chr3R 18830042 18830095 chr3R 18830200 18830253 25 158 2.5 6.5 4.5 4.5 211 chr3R 18830042 intron CG18208 - chr3R 18830148 intron CG18208 - chr3R 18830253 intron CG18208 - chr3R_25_18830001 chr3R_18830001 RAL-321 2769 chr3R 18877995 18878039 chr3R 18878142 18878185 22 145 2.0 7.5 4.8 3.8 190 chr3R 18877995 intergenic not near genes chr3R 18878090 intergenic not near genes chr3R 18878185 intergenic not near genes chr3R_22_18875001 chr3R_18875001 RAL-321 2770 chr3R 18887582 18887595 chr3R 18887683 18887696 8 101 8.0 11.5 9.8 0.7 114 chr3R 18887582 intergenic not near genes chr3R 18887639 intergenic not near genes chr3R 18887696 intergenic not near genes chr3R_8_18885001 chr3R_18885001 RAL-321 2771 chr3R 18891792 18891842 chr3R 18891895 18891945 22 102 6.0 3.0 4.5 4.0 153 chr3R 18891792 intergenic not near genes chr3R 18891868 intergenic not near genes chr3R 18891945 intergenic not near genes chr3R_22_18890001 chr3R_18890001 RAL-321 2772 chr3R 19014075 19014122 chr3R 19014175 19014209 20 95 6.0 6.0 6.0 2.9 134 chr3R 19014075 intron gukh + chr3R 19014142 intron gukh + chr3R 19014209 intron gukh + chr3R_20_19010001 chr3R_19010001 RAL-321 2773 chr3R 19078097 19078132 chr3R 19078209 19078243 12 108 8.5 5.0 6.8 1.5 146 chr3R 19078097 intron cdi - chr3R 19078170 intron cdi - chr3R 19078243 intron cdi - chr3R_12_19075001 chr3R_19075001 RAL-321 2774 chr3R 19109201 19109252 chr3R 19109333 19109383 13 128 6.5 3.5 5.0 2.2 182 chr3R 19109201 intron CG6040 + chr3R 19109292 intron CG6040 + chr3R 19109383 intron CG6040 + chr3R_13_19105001 chr3R_19105001 RAL-321 2775 chr3R 19117043 19117095 chr3R 19117207 19117217 7 157 5.5 0.0 2.8 1.8 174 chr3R 19117043 intron CG6040 + chr3R 19117130 intron CG6040 + chr3R 19117217 intron CG6040 + chr3R_7_19115001 chr3R_19115001 RAL-321 2776 chr3R 19136408 19136409 chr3R 19139774 19139872 Bari1 21 3376 65.0 39.0 52.0 0.4 3464 chr3R 19136408 exon Cyp12a4 + chr3R 19138140 intergenic not near genes chr3R 19139872 3` UTR Ppcs - chr3R_21_19135001 chr3R_19135001 RAL-321 2777 chr3R 19140248 19140300 chr3R 19140716 19140768 19 465 5.0 3.0 4.0 3.8 520 chr3R 19140248 3` UTR Ppcs - chr3R 19140508 3` UTR Ppcs - chr3R 19140768 3` UTR Ppcs - chr3R_19_19140001 chr3R_19140001 RAL-321 2778 chr3R 19193002 19193003 chr3R 19197279 19197327 F-element 5 4299 0.0 4.0 2.0 1.7 4325 chr3R 19193002 intron CG31475 + chr3R 19195164 intron CG31475 + chr3R 19197327 intron CG31475 + chr3R_5_19195001 chr3R_19195001 RAL-321 2779 chr3R 19198315 19198357 chr3R 19198457 19198499 23 142 7.5 7.0 7.2 2.8 184 chr3R 19198315 intron CG31475 + chr3R 19198407 intron CG31475 + chr3R 19198499 intron CG31475 + chr3R_23_19195001 chr3R_19195001 RAL-321 2780 chr3R 19220952 19221001 chr3R 19221089 19221138 23 137 0.0 4.5 2.2 7.2 186 chr3R 19220952 intron vib - chr3R 19221045 intron vib - chr3R 19221138 intron vib - chr3R_23_19220001 chr3R_19220001 RAL-321 2781 chr3R 19265499 19265685 chr3R 19265601 19265796 17 102 4.5 4.5 4.5 3.1 297 chr3R 19265499 intergenic not near genes chr3R 19265648 intergenic not near genes chr3R 19265796 intergenic not near genes chr3R_17_19265001 chr3R_19265001 RAL-321 2782 chr3R 19290907 19290913 chr3R 19291010 19291016 5 103 8.0 5.0 6.5 0.7 109 chr3R 19290907 intergenic not near genes chr3R 19290962 intergenic not near genes chr3R 19291016 intergenic not near genes chr3R_5_19290001 chr3R_19290001 RAL-321 2783 chr3R 19302186 19302221 chr3R 19302307 19302342 6 121 0.0 6.0 3.0 1.5 156 chr3R 19302186 intergenic not near genes chr3R 19302264 intergenic Dl - chr3R 19302342 intergenic Dl - chr3R_6_19300001 chr3R_19300001 RAL-321 2784 chr3R 19340375 19340426 chr3R 19340472 19340523 22 97 6.0 6.0 6.0 3.1 148 chr3R 19340375 intergenic not near genes chr3R 19340449 intergenic not near genes chr3R 19340523 intergenic not near genes chr3R_22_19340001 chr3R_19340001 RAL-321 2785 chr3R 19344646 19344698 chr3R 19344801 19344853 23 155 8.0 6.0 7.0 2.9 207 chr3R 19344646 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344853 intergenic not near genes chr3R_23_19340001 chr3R_19340001 RAL-321 2786 chr3R 19486159 19486212 chr3R 19486350 19486403 19 185 4.5 7.0 5.8 2.8 244 chr3R 19486159 intron Dys + chr3R 19486281 intron Dys + chr3R 19486403 intron Dys + chr3R_19_19485001 chr3R_19485001 RAL-321 2787 chr3R 19532974 19532997 chr3R 19533186 19533209 12 211 11.5 0.5 6.0 1.7 235 chr3R 19532974 intron Dys + chr3R 19533092 intron Dys + chr3R 19533209 intron Dys + chr3R_12_19530001 chr3R_19530001 RAL-321 2788 chr3R 19590628 19590647 chr3R 19590740 19590759 14 111 3.0 4.5 3.8 2.9 131 chr3R 19590628 exon Dys + chr3R 19590694 intron Dys + chr3R 19590759 exon Dys + chr3R_14_19590001 chr3R_19590001 RAL-321 2789 chr3R 19602743 19602784 chr3R 19602841 19602875 17 95 6.0 5.0 5.5 2.6 132 chr3R 19602743 intergenic CG7333 + chr3R 19602809 intergenic CG7333 + chr3R 19602875 intergenic CG7333 +,CG7342 + chr3R_17_19600001 chr3R_19600001 RAL-321 2790 chr3R 19783165 19783212 chr3R 19783272 19783320 24 108 2.5 5.5 4.0 4.8 155 chr3R 19783165 intergenic CG11407 +,CG11453 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783320 intergenic CG11407 +,CG11453 + chr3R_24_19780001 chr3R_19780001 RAL-321 2791 chr3R 19793873 19793927 chr3R 19793986 19794040 20 113 6.0 5.0 5.5 3.1 167 chr3R 19793873 intergenic bnl - chr3R 19793956 intergenic bnl - chr3R 19794040 intergenic bnl - chr3R_20_19790001 chr3R_19790001 RAL-321 2792 chr3R 19830872 19830883 chr3R 19830969 19830980 12 97 0.0 11.0 5.5 1.8 108 chr3R 19830872 intron bnl - chr3R 19830926 intron bnl - chr3R 19830980 intron bnl - chr3R_12_19830001 chr3R_19830001 RAL-321 2793 chr3R 19839516 19839561 chr3R 19839768 19839813 24 251 2.5 5.5 4.0 4.8 297 chr3R 19839516 intergenic not near genes chr3R 19839664 intergenic not near genes chr3R 19839813 intergenic not near genes chr3R_24_19835001 chr3R_19835001 RAL-321 2794 chr3R 19846951 19846993 chr3R 19847119 19847174 10 179 4.5 3.0 3.8 2.1 223 chr3R 19846951 intergenic CG4662 + chr3R 19847062 intergenic CG4662 + chr3R 19847174 intergenic CG4662 + chr3R_10_19845001 chr3R_19845001 RAL-321 2795 chr3R 19908274 19908304 chr3R 19908378 19908408 13 102 0.0 5.5 2.8 3.4 134 chr3R 19908274 intron RhoGAP92B + chr3R 19908341 intron RhoGAP92B + chr3R 19908408 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_13_19905001 chr3R_19905001 RAL-321 2796 chr3R 19913989 19914044 chr3R 19914102 19914157 32 112 10.5 8.5 9.5 3.0 168 chr3R 19913989 3` UTR RhoGAP92B + chr3R 19914073 3` UTR RhoGAP92B + chr3R 19914157 3` UTR RhoGAP92B + chr3R_32_19910001 chr3R_19910001 RAL-321 2797 chr3R 19943866 19943882 chr3R 19943960 19943982 9 99 11.5 0.0 5.8 1.3 116 chr3R 19943866 intron Hs6st - chr3R 19943924 intron Hs6st - chr3R 19943982 intron Hs6st - chr3R_9_19940001 chr3R_19940001 RAL-321 2798 chr3R 20041092 20041139 chr3R 20041214 20041261 26 121 7.0 7.0 7.0 3.2 169 chr3R 20041092 intron CG17193 - chr3R 20041176 intron CG17193 - chr3R 20041261 intron CG17193 - chr3R_26_20040001 chr3R_20040001 RAL-321 2799 chr3R 20109516 20109566 chr3R 20114742 20114792 copia 22 5225 5.5 3.5 4.5 4.0 5276 chr3R 20109516 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114792 intergenic CG10887 + chr3R_22_20110001 chr3R_20110001 RAL-321 2800 chr3R 20132489 20132542 chr3R 20132935 20132986 18 445 6.5 4.0 5.2 2.9 497 chr3R 20132489 intergenic not near genes chr3R 20132738 intergenic not near genes chr3R 20132986 intergenic not near genes chr3R_18_20130001 chr3R_20130001 RAL-321 2801 chr3R 20146293 20146347 chr3R 20146634 20146688 16 336 5.0 5.5 5.2 2.6 395 chr3R 20146293 intergenic not near genes chr3R 20146490 intergenic not near genes chr3R 20146688 intergenic not near genes chr3R_16_20145001 chr3R_20145001 RAL-321 2802 chr3R 20156678 20156720 chr3R 20165868 20165910 roo 21 9188 6.0 8.0 7.0 2.6 9232 chr3R 20156678 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165910 intergenic not near genes chr3R_21_20160001 chr3R_20160001 RAL-321 2803 chr3R 20203928 20203931 chr3R 20204029 20204032 4 101 1.5 1.0 1.2 1.8 104 chr3R 20203928 intergenic not near genes chr3R 20203980 intergenic not near genes chr3R 20204032 intergenic not near genes chr3R_4_20200001 chr3R_20200001 RAL-321 2804 chr3R 20205542 20205593 chr3R 20205684 20205735 26 141 6.5 1.0 3.8 5.4 193 chr3R 20205542 intron Nlg4 + chr3R 20205638 intron Nlg4 + chr3R 20205735 intron Nlg4 + chr3R_26_20205001 chr3R_20205001 RAL-321 2805 chr3R 20205923 20205935 chr3R 20206027 20206039 7 104 0.5 3.5 2.0 2.3 116 chr3R 20205923 intron Nlg4 + chr3R 20205981 intron Nlg4 + chr3R 20206039 intron Nlg4 + chr3R_7_20205001 chr3R_20205001 RAL-321 2806 chr3R 20209783 20209833 chr3R 20209889 20209939 14 106 3.5 3.5 3.5 3.1 156 chr3R 20209783 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209861 intron Nlg4 + chr3R 20209939 intron Nlg4 + chr3R_14_20205001 chr3R_20205001 RAL-321 2807 chr3R 20245263 20245305 chr3R 20248893 20248935 F-element 22 3630 6.5 4.5 5.5 3.4 3672 chr3R 20245263 3` UTR Nlg4 + chr3R 20247099 intergenic not near genes chr3R 20248935 intergenic not near genes chr3R_22_20245001 chr3R_20245001 RAL-321 2808 chr3R 20266497 20266546 chr3R 20272988 20273037 Burdock 24 6490 8.5 12.0 10.2 2.1 6540 chr3R 20266497 intron cic + chr3R 20269767 intron cic + chr3R 20273037 intron cic + chr3R_24_20265001 chr3R_20265001 RAL-321 2809 chr3R 20282256 20282305 chr3R 20282352 20282401 12 96 1.5 6.5 4.0 2.4 145 chr3R 20282256 intron cic + chr3R 20282328 intron cic + chr3R 20282401 intron cic + chr3R_12_20280001 chr3R_20280001 RAL-321 2810 chr3R 20286129 20286161 chr3R 20286256 20286288 12 127 10.0 1.0 5.5 1.8 159 chr3R 20286129 intron cic + chr3R 20286208 intron cic + chr3R 20286288 intron cic + chr3R_12_20285001 chr3R_20285001 RAL-321 2811 chr3R 20308167 20308212 chr3R 20308275 20308331 14 108 7.5 0.0 3.8 2.9 164 chr3R 20308167 intergenic not near genes chr3R 20308249 intergenic not near genes chr3R 20308331 intergenic not near genes chr3R_14_20305001 chr3R_20305001 RAL-321 2812 chr3R 20312836 20312883 chr3R 20312942 20312989 27 106 4.5 3.5 4.0 5.4 153 chr3R 20312836 intron CG42668 + chr3R 20312912 intron CG42668 + chr3R 20312989 intron CG42668 + chr3R_27_20310001 chr3R_20310001 RAL-321 2813 chr3R 20330977 20331032 chr3R 20331483 20331538 roo 28 506 8.0 6.0 7.0 3.5 561 chr3R 20330977 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331538 intergenic not near genes chr3R_28_20330001 chr3R_20330001 RAL-321 2814 chr3R 20391732 20391755 chr3R 20391848 20391871 5 116 8.5 10.0 9.2 0.5 139 chr3R 20391732 intron Gfrl - chr3R 20391802 intron Gfrl - chr3R 20391871 intron Gfrl - chr3R_5_20390001 chr3R_20390001 RAL-321 2815 chr3R 20391757 20391774 chr3R 20391839 20391890 9 109 3.0 7.5 5.2 1.5 133 chr3R 20391757 intron Gfrl - chr3R 20391824 intron Gfrl - chr3R 20391890 intron Gfrl - chr3R_9_20390001 chr3R_20390001 RAL-321 2816 chr3R 20394811 20394817 chr3R 20394907 20394913 6 96 4.0 5.0 4.5 1.1 102 chr3R 20394811 intron Gfrl - chr3R 20394862 intron Gfrl - chr3R 20394913 intron Gfrl - chr3R_6_20390001 chr3R_20390001 RAL-321 2817 chr3R 20450135 20450143 chr3R 20450240 20450248 7 105 0.0 4.5 2.2 2.2 113 chr3R 20450135 intron Gfrl - chr3R 20450192 intron Gfrl - chr3R 20450248 intron Gfrl - chr3R_7_20450001 chr3R_20450001 RAL-321 2818 chr3R 20512973 20512998 chr3R 20515705 20515730 opus 10 2731 8.0 0.0 4.0 2.0 2757 chr3R 20512973 intergenic not near genes chr3R 20514352 intergenic not near genes chr3R 20515730 intergenic not near genes chr3R_10_20510001 chr3R_20510001 RAL-321 2819 chr3R 20575807 20575810 chr3R 20575903 20575906 4 96 12.5 0.0 6.2 0.6 99 chr3R 20575807 intron TFAM - chr3R 20575856 intron TFAM - chr3R 20575906 intron TFAM - chr3R_4_20575001 chr3R_20575001 RAL-321 2820 chr3R 20594461 20594511 chr3R 20594571 20594620 14 109 5.0 0.0 2.5 4.0 159 chr3R 20594461 intron bon + chr3R 20594540 intron bon + chr3R 20594620 intron bon + chr3R_14_20590001 chr3R_20590001 RAL-321 2821 chr3R 20596171 20596215 chr3R 20596278 20596322 19 107 5.0 9.0 7.0 2.4 151 chr3R 20596171 intron bon + chr3R 20596246 intron bon + chr3R 20596322 intron bon + chr3R_19_20595001 chr3R_20595001 RAL-321 2822 chr3R 20617492 20617514 chr3R 20617781 20617803 7 289 1.5 4.0 2.8 1.8 311 chr3R 20617492 intergenic CG5466 + chr3R 20617648 intergenic CG5466 + chr3R 20617803 intergenic CG5466 + chr3R_7_20615001 chr3R_20615001 RAL-321 2823 chr3R 20684195 20684246 chr3R 20684299 20684338 29 102 6.5 5.0 5.8 4.3 143 chr3R 20684195 intergenic not near genes chr3R 20684266 intergenic not near genes chr3R 20684338 intergenic not near genes chr3R_29_20680001 chr3R_20680001 RAL-321 2824 chr3R 20707725 20707773 chr3R 20707960 20708008 28 234 4.0 7.0 5.5 4.3 283 chr3R 20707725 intron Oamb - chr3R 20707866 intron Oamb - chr3R 20708008 intron Oamb - chr3R_28_20705001 chr3R_20705001 RAL-321 2825 chr3R 20730923 20730951 chr3R 20731034 20731051 11 110 11.5 0.0 5.8 1.6 128 chr3R 20730923 intergenic not near genes chr3R 20730987 intergenic not near genes chr3R 20731051 intergenic not near genes chr3R_11_20730001 chr3R_20730001 RAL-321 2826 chr3R 20735005 20735046 chr3R 20735095 20735131 9 93 3.5 5.0 4.2 1.7 126 chr3R 20735005 intergenic not near genes chr3R 20735068 intergenic not near genes chr3R 20735131 intergenic cdc2c + chr3R_9_20735001 chr3R_20735001 RAL-321 2827 chr3R 20739558 20739606 chr3R 20739696 20739744 18 137 6.5 5.0 5.8 2.6 186 chr3R 20739558 intergenic CG17267 - chr3R 20739651 intergenic CG42322 + chr3R 20739744 intergenic CG42322 + chr3R_18_20735001 chr3R_20735001 RAL-321 2828 chr3R 20764395 20764440 chr3R 20764511 20764531 18 108 5.5 5.5 5.5 2.8 136 chr3R 20764395 intron Syp + chr3R 20764463 intron Syp + chr3R 20764531 intron Syp + chr3R_18_20760001 chr3R_20760001 RAL-321 2829 chr3R 20767488 20767534 chr3R 20767597 20767650 9 111 5.5 7.5 6.5 1.2 162 chr3R 20767488 intron Syp + chr3R 20767569 intron Syp + chr3R 20767650 intron Syp + chr3R_9_20765001 chr3R_20765001 RAL-321 2830 chr3R 20787429 20787458 chr3R 20787535 20787569 13 109 8.5 9.0 8.8 1.3 140 chr3R 20787429 intron Syp + chr3R 20787499 intron Syp + chr3R 20787569 intron Syp + chr3R_13_20785001 chr3R_20785001 RAL-321 2831 chr3R 20870235 20870283 chr3R 20870340 20870388 21 101 3.0 7.5 5.2 3.4 153 chr3R 20870235 intergenic not near genes chr3R 20870312 intergenic not near genes chr3R 20870388 intergenic not near genes chr3R_21_20870001 chr3R_20870001 RAL-321 2832 chr3R 20878370 20878407 chr3R 20878476 20878478 5 99 3.0 0.0 1.5 2.0 108 chr3R 20878370 intergenic TotZ +,CR44048 - chr3R 20878424 3` UTR CR44048 - chr3R 20878478 3` UTR CR44048 - chr3R_5_20875001 chr3R_20875001 RAL-321 2833 chr3R 20936070 20936107 chr3R 20936167 20936204 6 97 2.5 3.5 3.0 1.5 134 chr3R 20936070 intron CG31191 - chr3R 20936137 intron CG31191 - chr3R 20936204 intron CG31191 - chr3R_6_20935001 chr3R_20935001 RAL-321 2834 chr3R 20958367 20958419 chr3R 20958488 20958540 18 121 6.5 6.0 6.2 2.5 173 chr3R 20958367 intron Atpalpha + chr3R 20958454 intron Atpalpha + chr3R 20958540 intron Atpalpha + chr3R_18_20955001 chr3R_20955001 RAL-321 2835 chr3R 20966128 20966156 chr3R 20966231 20966259 11 103 0.5 5.5 3.0 2.8 131 chr3R 20966128 intron Atpalpha + chr3R 20966194 intron Atpalpha + chr3R 20966259 intron Atpalpha + chr3R_11_20965001 chr3R_20965001 RAL-321 2836 chr3R 21013995 21014040 chr3R 21014093 21014103 23 96 7.5 9.0 8.2 2.5 108 chr3R 21013995 3` UTR Calx + chr3R 21014049 3` UTR Calx + chr3R 21014103 3` UTR Calx + chr3R_23_21010001 chr3R_21010001 RAL-321 2837 chr3R 21020378 21020433 chr3R 21020474 21020529 28 96 7.5 8.5 8.0 3.1 151 chr3R 21020378 3` UTR Rlip + chr3R 21020454 3` UTR Rlip + chr3R 21020529 3` UTR Rlip + chr3R_28_21020001 chr3R_21020001 RAL-321 2838 chr3R 21048378 21048426 chr3R 21051403 21051447 19 3023 57.0 53.0 55.0 0.3 3069 chr3R 21048378 exon CG7079 - chr3R 21049912 intergenic CG17279 - chr3R 21051447 3` UTR Mvl - chr3R_19_21045001 chr3R_21045001 RAL-321 2839 chr3R 21108019 21108059 chr3R 21108300 21108340 20 281 3.5 4.5 4.0 4.0 321 chr3R 21108019 intergenic Sec15 -,rtet + chr3R 21108180 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_20_21105001 chr3R_21105001 RAL-321 2840 chr3R 21129806 21130016 chr3R 21129915 21130113 16 104 0.5 0.0 0.2 13.3 307 chr3R 21129806 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129960 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130113 intergenic Ice2 +,Obp93a - chr3R_16_21125001 chr3R_21125001 RAL-321 2841 chr3R 21141654 21141671 chr3R 21150155 21150165 Tirant 4 8498 14.0 7.5 10.8 0.3 8511 chr3R 21141654 intron SNF4Agamma + chr3R 21145910 intron SNF4Agamma + chr3R 21150165 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-321 2842 chr3R 21141676 21141707 chr3R 21150154 21150207 Tirant 7 8480 5.5 6.5 6.0 1.0 8531 chr3R 21141676 intron SNF4Agamma + chr3R 21145942 intron SNF4Agamma + chr3R 21150207 intron SNF4Agamma + chr3R_7_21145001 chr3R_21145001 RAL-321 2843 chr3R 21154532 21154584 chr3R 21154757 21154819 18 234 5.5 0.0 2.8 4.7 287 chr3R 21154532 intron SNF4Agamma + chr3R 21154676 intron SNF4Agamma + chr3R 21154819 intron SNF4Agamma + chr3R_18_21150001 chr3R_21150001 RAL-321 2844 chr3R 21188041 21188085 chr3R 21188171 21188214 7 130 0.0 0.0 0.0 7.0 173 chr3R 21188041 intron SNF4Agamma + chr3R 21188128 intron SNF4Agamma + chr3R 21188214 intron SNF4Agamma + chr3R_7_21185001 chr3R_21185001 RAL-321 2845 chr3R 21240426 21240437 chr3R 21240538 21240544 6 110 15.5 5.5 10.5 0.5 118 chr3R 21240426 intergenic not near genes chr3R 21240485 intergenic not near genes chr3R 21240544 intergenic not near genes chr3R_6_21240001 chr3R_21240001 RAL-321 2846 chr3R 21240440 21240479 chr3R 21240536 21240591 21 110 6.0 5.5 5.8 3.1 151 chr3R 21240440 intergenic not near genes chr3R 21240516 intergenic not near genes chr3R 21240591 intergenic not near genes chr3R_21_21240001 chr3R_21240001 RAL-321 2847 chr3R 21343805 21343844 chr3R 21343918 21343957 21 112 6.0 9.0 7.5 2.5 152 chr3R 21343805 intron CG16791 - chr3R 21343881 intron CG16791 - chr3R 21343957 intron CG16791 - chr3R_21_21340001 chr3R_21340001 RAL-321 2848 chr3R 21385911 21385960 chr3R 21386008 21386057 28 95 3.5 7.0 5.2 4.5 146 chr3R 21385911 intergenic not near genes chr3R 21385984 intergenic not near genes chr3R 21386057 intergenic not near genes chr3R_28_21385001 chr3R_21385001 RAL-321 2849 chr3R 21388886 21388934 chr3R 21389004 21389037 13 114 6.5 5.0 5.8 1.9 151 chr3R 21388886 5` UTR bap + chr3R 21388962 5` UTR bap + chr3R 21389037 exon bap + chr3R_13_21385001 chr3R_21385001 RAL-321 2850 chr3R 21458075 21458082 chr3R 21458203 21458211 6 129 14.0 0.0 7.0 0.8 136 chr3R 21458075 intergenic not near genes chr3R 21458143 intergenic not near genes chr3R 21458211 intergenic not near genes chr3R_6_21455001 chr3R_21455001 RAL-321 2851 chr3R 21458086 21458100 chr3R 21458200 21458229 8 126 8.0 0.0 4.0 1.6 143 chr3R 21458086 intergenic not near genes chr3R 21458158 intergenic not near genes chr3R 21458229 intergenic not near genes chr3R_8_21455001 chr3R_21455001 RAL-321 2852 chr3R 21459006 21459040 chr3R 21459128 21459147 14 119 7.0 1.0 4.0 2.8 141 chr3R 21459006 intergenic not near genes chr3R 21459076 intergenic not near genes chr3R 21459147 intergenic not near genes chr3R_14_21455001 chr3R_21455001 RAL-321 2853 chr3R 21471997 21472024 chr3R 21472098 21472125 11 100 15.5 9.0 12.2 0.8 128 chr3R 21471997 intergenic not near genes chr3R 21472061 intergenic not near genes chr3R 21472125 intergenic not near genes chr3R_11_21470001 chr3R_21470001 RAL-321 2854 chr3R 21506854 21506912 chr3R 21506960 21507012 21 103 0.0 6.5 3.2 5.0 158 chr3R 21506854 intron C15 + chr3R 21506933 intron C15 + chr3R 21507012 intron C15 + chr3R_21_21505001 chr3R_21505001 RAL-321 2855 chr3R 21517998 21518272 chr3R 21518147 21518376 14 132 0.0 0.0 0.0 14.0 378 chr3R 21517998 intergenic not near genes chr3R 21518187 intergenic not near genes chr3R 21518376 intergenic not near genes chr3R_14_21515001 chr3R_21515001 RAL-321 2856 chr3R 21519968 21520132 chr3R 21520089 21520241 41 118 1.0 1.0 1.0 20.5 273 chr3R 21519968 intergenic not near genes chr3R 21520104 intergenic not near genes chr3R 21520241 intergenic not near genes chr3R_41_21520001 chr3R_21520001 RAL-321 2857 chr3R 21725666 21725686 chr3R 21725822 21725842 9 156 0.0 12.5 6.2 1.2 176 chr3R 21725666 intergenic not near genes chr3R 21725754 intergenic not near genes chr3R 21725842 intergenic not near genes chr3R_9_21725001 chr3R_21725001 RAL-321 2858 chr3R 21731781 21731835 chr3R 21731909 21731956 8 126 6.5 0.0 3.2 1.9 175 chr3R 21731781 intergenic not near genes chr3R 21731868 intergenic not near genes chr3R 21731956 intergenic not near genes chr3R_8_21730001 chr3R_21730001 RAL-321 2859 chr3R 21733555 21733583 chr3R 21733655 21733683 4 100 43.5 45.0 44.2 0.1 128 chr3R 21733555 intergenic not near genes chr3R 21733619 intergenic not near genes chr3R 21733683 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-321 2860 chr3R 21733984 21734000 chr3R 21734116 21734132 10 132 16.5 5.0 10.8 0.8 148 chr3R 21733984 intergenic not near genes chr3R 21734058 intergenic not near genes chr3R 21734132 intergenic not near genes chr3R_10_21730001 chr3R_21730001 RAL-321 2861 chr3R 21761101 21761153 chr3R 21768513 21768565 mdg1 25 7407 4.0 7.0 5.5 3.8 7464 chr3R 21761101 exon CG42335 + chr3R 21764833 intron CG42335 + chr3R 21768565 exon CG42335 + chr3R_25_21760001 chr3R_21760001 RAL-321 2862 chr3R 21784846 21784855 chr3R 21784964 21784973 5 118 14.0 0.0 7.0 0.6 127 chr3R 21784846 3` UTR,3` UTR CASK -,CRG - chr3R 21784910 3` UTR,3` UTR CASK -,CRG - chr3R 21784973 3` UTR,3` UTR CASK -,CRG - chr3R_5_21780001 chr3R_21780001 RAL-321 2863 chr3R 21784859 21784890 chr3R 21784957 21784964 4 98 5.0 0.0 2.5 1.1 105 chr3R 21784859 3` UTR,3` UTR CASK -,CRG - chr3R 21784912 3` UTR,3` UTR CASK -,CRG - chr3R 21784964 3` UTR,3` UTR CASK -,CRG - chr3R_4_21780001 chr3R_21780001 RAL-321 2864 chr3R 21800469 21800520 chr3R 21800574 21800625 21 105 2.5 6.0 4.2 4.0 156 chr3R 21800469 intron CASK - chr3R 21800547 intron CASK - chr3R 21800625 intron CASK - chr3R_21_21800001 chr3R_21800001 RAL-321 2865 chr3R 8339246 8339246 chr3R 21907534 21907534 6 13568288 27.5 30.0 28.8 0.2 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-321 2866 chr3R 21907534 21907534 chr3R 28831801 28831802 8 6924268 27.5 20.5 24.0 0.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_8_25365001 chr3R_25365001 RAL-321 2867 chr3R 8339247 8339247 chr3R 21907535 21907535 6 13568288 28.0 29.5 28.8 0.2 13568288 chr3R 8339247 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-321 2868 chr3R 21907535 21907535 chr3R 28831801 28831802 10 6924266 27.0 20.5 23.8 0.4 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_10_25365001 chr3R_25365001 RAL-321 2869 chr3R 21907536 21907536 chr3R 28831801 28831802 26 6924266 27.5 20.5 24.0 1.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_26_25365001 chr3R_25365001 RAL-321 2870 chr3R 21918998 21919017 chr3R 21919098 21919117 11 100 0.0 12.5 6.2 1.5 119 chr3R 21918998 intergenic not near genes chr3R 21919058 intergenic not near genes chr3R 21919117 intergenic not near genes chr3R_11_21915001 chr3R_21915001 RAL-321 2871 chr3R 22040119 22040160 chr3R 22040316 22040357 17 196 0.5 4.0 2.2 5.3 238 chr3R 22040119 intergenic not near genes chr3R 22040238 intergenic not near genes chr3R 22040357 intergenic not near genes chr3R_17_22040001 chr3R_22040001 RAL-321 2872 chr3R 22055563 22055589 chr3R 22055764 22055798 12 206 2.5 7.5 5.0 2.0 235 chr3R 22055563 intron how + chr3R 22055680 intron how + chr3R 22055798 intron how + chr3R_12_22055001 chr3R_22055001 RAL-321 2873 chr3R 22064874 22064925 chr3R 22065236 22065237 15 356 5.0 2.5 3.8 3.1 363 chr3R 22064874 intron how + chr3R 22065056 intron how + chr3R 22065237 intron how + chr3R_15_22065001 chr3R_22065001 RAL-321 2874 chr3R 22084606 22084611 chr3R 22084715 22084720 4 109 1.0 8.5 4.8 0.7 114 chr3R 22084606 intergenic not near genes chr3R 22084663 intergenic not near genes chr3R 22084720 intergenic not near genes chr3R_4_22080001 chr3R_22080001 RAL-321 2875 chr3R 22084612 22084624 chr3R 22084708 22084733 6 107 1.0 8.0 4.5 1.1 121 chr3R 22084612 intergenic not near genes chr3R 22084672 intergenic not near genes chr3R 22084733 intergenic not near genes chr3R_6_22080001 chr3R_22080001 RAL-321 2876 chr3R 22144587 22144602 chr3R 22144798 22144813 5 211 3.5 7.5 5.5 0.8 226 chr3R 22144587 intron SKIP + chr3R 22144700 intron SKIP + chr3R 22144813 intron SKIP + chr3R_5_22140001 chr3R_22140001 RAL-321 2877 chr3R 22144603 22144631 chr3R 22144794 22144842 12 209 2.5 6.5 4.5 2.2 239 chr3R 22144603 intron SKIP + chr3R 22144722 intron SKIP + chr3R 22144842 intron SKIP + chr3R_12_22140001 chr3R_22140001 RAL-321 2878 chr3R 22234662 22234712 chr3R 22236001 22236051 pogo 23 1337 5.0 4.5 4.8 4.0 1389 chr3R 22234662 intron SKIP + chr3R 22235356 intron SKIP + chr3R 22236051 intron SKIP + chr3R_23_22235001 chr3R_22235001 RAL-321 2879 chr3R 22239475 22239521 chr3R 22248555 22248589 roo 11 9074 9.0 0.0 4.5 2.0 9114 chr3R 22239475 intron SKIP + chr3R 22244032 intron SKIP + chr3R 22248589 intron SKIP + chr3R_11_22240001 chr3R_22240001 RAL-321 2880 chr3R 22248630 22248662 chr3R 22248736 22248766 16 106 1.5 0.0 0.8 8.9 136 chr3R 22248630 intron SKIP + chr3R 22248698 intron SKIP + chr3R 22248766 intron SKIP + chr3R_16_22245001 chr3R_22245001 RAL-321 2881 chr3R 22312772 22312804 chr3R 22312972 22313008 8 201 13.0 15.5 14.2 0.5 236 chr3R 22312772 intron CG34377 - chr3R 22312890 intron CG34377 - chr3R 22313008 intron CG34377 - chr3R_8_22310001 chr3R_22310001 RAL-321 2882 chr3R 22346160 22346213 chr3R 22346266 22346317 10 105 4.5 6.0 5.2 1.6 157 chr3R 22346160 intergenic not near genes chr3R 22346238 intergenic not near genes chr3R 22346317 intergenic not near genes chr3R_10_22345001 chr3R_22345001 RAL-321 2883 chr3R 22349282 22349305 chr3R 22349411 22349434 6 129 0.0 3.0 1.5 2.4 152 chr3R 22349282 intergenic not near genes chr3R 22349358 intergenic not near genes chr3R 22349434 intergenic not near genes chr3R_6_22345001 chr3R_22345001 RAL-321 2884 chr3R 22433090 22433098 chr3R 22433189 22433203 4 106 9.5 8.5 9.0 0.4 113 chr3R 22433090 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433203 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-321 2885 chr3R 22437770 22437822 chr3R 22437880 22437932 30 109 0.5 1.5 1.0 15.0 162 chr3R 22437770 intergenic not near genes chr3R 22437851 intergenic not near genes chr3R 22437932 intergenic not near genes chr3R_30_22435001 chr3R_22435001 RAL-321 2886 chr3R 22450526 22450579 chr3R 22453186 22453214 NOF 23 2655 5.0 9.0 7.0 2.9 2688 chr3R 22450526 intron CG34376 + chr3R 22451870 intron CG34376 + chr3R 22453214 intron CG34376 + chr3R_23_22450001 chr3R_22450001 RAL-321 2887 chr3R 22507772 22507799 chr3R 22507871 22507898 12 101 16.5 6.5 11.5 1.0 126 chr3R 22507772 intron Octbeta1R + chr3R 22507835 intron Octbeta1R + chr3R 22507898 intron Octbeta1R + chr3R_12_22505001 chr3R_22505001 RAL-321 2888 chr3R 22507801 22507814 chr3R 22507870 22507912 7 92 11.0 6.0 8.5 0.7 111 chr3R 22507801 intron Octbeta1R + chr3R 22507856 intron Octbeta1R + chr3R 22507912 intron Octbeta1R + chr3R_7_22505001 chr3R_22505001 RAL-321 2889 chr3R 22651196 22651231 chr3R 22652108 22652160 27 924 43.5 58.5 51.0 0.5 964 chr3R 22651196 intron wake + chr3R 22651678 intron wake + chr3R 22652160 5` UTR wake + chr3R_27_22650001 chr3R_22650001 RAL-321 2890 chr3R 22684186 22684241 chr3R 22684282 22684337 29 93 3.5 3.5 3.5 6.4 151 chr3R 22684186 intergenic not near genes chr3R 22684262 intergenic not near genes chr3R 22684337 intergenic not near genes chr3R_29_22680001 chr3R_22680001 RAL-321 2891 chr3R 22797754 22797935 chr3R 22797845 22798051 30 111 0.0 0.0 0.0 30.0 297 chr3R 22797754 intergenic not near genes chr3R 22797902 intergenic not near genes chr3R 22798051 intergenic not near genes chr3R_30_22795001 chr3R_22795001 RAL-321 2892 chr3R 22802894 22802931 chr3R 22802994 22803031 22 98 0.0 7.5 3.8 4.6 137 chr3R 22802894 intergenic not near genes chr3R 22802962 intergenic not near genes chr3R 22803031 intergenic not near genes chr3R_22_22800001 chr3R_22800001 RAL-321 2893 chr3R 22840814 22840845 chr3R 22841280 22841327 21 477 7.5 7.0 7.2 2.6 513 chr3R 22840814 intergenic not near genes chr3R 22841070 intergenic not near genes chr3R 22841327 intergenic not near genes chr3R_21_22840001 chr3R_22840001 RAL-321 2894 chr3R 22881185 22881198 chr3R 22884911 22884924 Doc 4 3726 8.5 10.5 9.5 0.4 3739 chr3R 22881185 intergenic not near genes chr3R 22883054 intergenic not near genes chr3R 22884924 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-321 2895 chr3R 22917971 22917984 chr3R 22918097 22918110 6 124 9.5 15.0 12.2 0.5 139 chr3R 22917971 intron klg + chr3R 22918040 intron klg + chr3R 22918110 intron klg + chr3R_6_22915001 chr3R_22915001 RAL-321 2896 chr3R 22974270 22974306 chr3R 22974374 22974410 11 101 0.5 6.0 3.2 2.6 140 chr3R 22974270 intergenic not near genes chr3R 22974340 intergenic not near genes chr3R 22974410 intergenic not near genes chr3R_11_22970001 chr3R_22970001 RAL-321 2897 chr3R 22993487 22993538 chr3R 22993642 22993692 21 147 5.0 7.0 6.0 3.0 205 chr3R 22993487 intron Nha2 - chr3R 22993590 intron Nha2 - chr3R 22993692 intron Nha2 - chr3R_21_22990001 chr3R_22990001 RAL-321 2898 chr3R 23064153 23064198 chr3R 23064281 23064327 18 126 6.5 5.5 6.0 2.6 174 chr3R 23064153 exon CG17111 - chr3R 23064240 intron CG17111 - chr3R 23064327 exon CG17111 - chr3R_18_23060001 chr3R_23060001 RAL-321 2899 chr3R 23064865 23064871 chr3R 23064976 23064982 4 111 0.0 9.0 4.5 0.7 117 chr3R 23064865 intron CG17111 - chr3R 23064924 intron CG17111 - chr3R 23064982 intron CG17111 - chr3R_4_23060001 chr3R_23060001 RAL-321 2900 chr3R 23064872 23064903 chr3R 23064971 23065014 17 110 0.0 7.5 3.8 3.5 142 chr3R 23064872 intron CG17111 - chr3R 23064943 intron CG17111 - chr3R 23065014 intron CG17111 - chr3R_17_23060001 chr3R_23060001 RAL-321 2901 chr3R 23073659 23073685 chr3R 23073743 23073793 11 101 5.0 2.0 3.5 2.4 134 chr3R 23073659 intron CG13830 - chr3R 23073726 intron CG13830 - chr3R 23073793 intron CG13830 - chr3R_11_23070001 chr3R_23070001 RAL-321 2902 chr3R 23079032 23079086 chr3R 23079172 23079205 19 137 4.5 6.5 5.5 2.9 173 chr3R 23079032 intron CG13830 - chr3R 23079118 intron CG13830 - chr3R 23079205 intron CG13830 - chr3R_19_23075001 chr3R_23075001 RAL-321 2903 chr3R 23086090 23086137 chr3R 23086236 23086264 12 147 4.0 6.0 5.0 2.0 174 chr3R 23086090 intron CG13830 - chr3R 23086177 intron CG13830 - chr3R 23086264 intron CG13830 - chr3R_12_23085001 chr3R_23085001 RAL-321 2904 chr3R 23100133 23100430 chr3R 23100240 23100500 28 101 12.5 4.5 8.5 2.9 367 chr3R 23100133 intron,exon CG13830 -,CG6738 + chr3R 23100316 intron,exon CG13830 -,CG6738 + chr3R 23100500 intron,exon CG13830 -,CG6738 + chr3R_28_23100001 chr3R_23100001 RAL-321 2905 chr3R 23100434 23100440 chr3R 23100520 23100525 4 88 10.0 12.5 11.2 0.3 91 chr3R 23100434 intron,exon CG13830 -,CG6738 + chr3R 23100480 intron,exon CG13830 -,CG6738 + chr3R 23100525 intron,exon CG13830 -,CG6738 + chr3R_4_23100001 chr3R_23100001 RAL-321 2906 chr3R 23102948 23102954 chr3R 23103054 23103060 5 106 14.0 0.0 7.0 0.6 112 chr3R 23102948 intron CG13830 - chr3R 23103004 intron CG13830 - chr3R 23103060 intron CG13830 - chr3R_5_23100001 chr3R_23100001 RAL-321 2907 chr3R 23102958 23102998 chr3R 23103053 23103094 4 92 2.0 0.0 1.0 2.0 136 chr3R 23102958 intron CG13830 - chr3R 23103026 intron CG13830 - chr3R 23103094 intron CG13830 - chr3R_4_23100001 chr3R_23100001 RAL-321 2908 chr3R 23113796 23113798 chr3R 23113889 23113895 4 95 2.0 7.0 4.5 0.7 99 chr3R 23113796 intergenic Rassf - chr3R 23113846 intergenic Rassf - chr3R 23113895 intergenic Rassf - chr3R_4_23110001 chr3R_23110001 RAL-321 2909 chr3R 23113799 23113805 chr3R 23113879 23113887 5 90 2.0 4.0 3.0 1.2 88 chr3R 23113799 intergenic Rassf - chr3R 23113843 intergenic Rassf - chr3R 23113887 intergenic Rassf - chr3R_5_23110001 chr3R_23110001 RAL-321 2910 chr3R 23356983 23356991 chr3R 23357086 23357097 6 106 10.5 8.0 9.2 0.6 114 chr3R 23356983 intron Sec13 + chr3R 23357040 intron Sec13 + chr3R 23357097 intron Sec13 + chr3R_6_23355001 chr3R_23355001 RAL-321 2911 chr3R 23356992 23356997 chr3R 23357084 23357103 4 100 10.5 7.5 9.0 0.4 111 chr3R 23356992 intron Sec13 + chr3R 23357048 intron Sec13 + chr3R 23357103 intron Sec13 + chr3R_4_23355001 chr3R_23355001 RAL-321 2912 chr3R 23360174 23360207 chr3R 23360270 23360303 9 96 1.0 9.5 5.2 1.5 129 chr3R 23360174 3` UTR RpS3 + chr3R 23360238 intergenic RpS3 + chr3R 23360303 intergenic RpS3 + chr3R_9_23360001 chr3R_23360001 RAL-321 2913 chr3R 23390946 23390952 chr3R 23391048 23391054 4 102 5.5 0.0 2.8 1.1 108 chr3R 23390946 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391054 intergenic CR43387 + chr3R_4_23390001 chr3R_23390001 RAL-321 2914 chr3R 23421321 23421362 chr3R 23421411 23421458 17 100 3.0 6.5 4.8 2.9 137 chr3R 23421321 intron CG4374 - chr3R 23421390 intron CG4374 - chr3R 23421458 intron CG4374 - chr3R_17_23420001 chr3R_23420001 RAL-321 2915 chr3R 23435368 23435368 chr3R 26323220 26323230 4 2887860 18.5 11.5 15.0 0.2 2887862 chr3R 23435368 intron CG4374 - chr3R 24879299 exon CG11089 + chr3R 26323230 intron CG33970 + chr3R_4_24875001 chr3R_24875001 RAL-321 2916 chr3R 23558378 23558429 chr3R 23560179 23560230 Bari1 25 1800 5.0 6.5 5.8 3.7 1852 chr3R 23558378 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560230 intron beat-IV + chr3R_25_23555001 chr3R_23555001 RAL-321 2917 chr3R 23564421 23564473 chr3R 23564585 23564637 29 163 5.0 6.0 5.5 4.5 216 chr3R 23564421 intron beat-IV + chr3R 23564529 intron beat-IV + chr3R 23564637 intron beat-IV + chr3R_29_23560001 chr3R_23560001 RAL-321 2918 chr3R 23684694 23684725 chr3R 23685180 23685194 roo 11 493 10.5 7.5 9.0 1.1 500 chr3R 23684694 exon CG18754 + chr3R 23684944 intron CG18754 + chr3R 23685194 exon CG18754 + chr3R_11_23680001 chr3R_23680001 RAL-321 2919 chr3R 23724870 23724900 chr3R 23724969 23725004 18 97 18.0 2.5 10.2 1.6 134 chr3R 23724870 intron CG10365 + chr3R 23724937 intron CG10365 + chr3R 23725004 intron CG10365 + chr3R_18_23720001 chr3R_23720001 RAL-321 2920 chr3R 23790128 23790166 chr3R 23790243 23790291 17 122 4.5 10.5 7.5 2.0 163 chr3R 23790128 intron mbc + chr3R 23790210 intron mbc + chr3R 23790291 intron mbc + chr3R_17_23790001 chr3R_23790001 RAL-321 2921 chr3R 23801556 23801606 chr3R 23801664 23801692 13 106 4.0 0.0 2.0 4.3 136 chr3R 23801556 3` UTR mbc + chr3R 23801624 3` UTR mbc + chr3R 23801692 intergenic CG33111 -,mbc + chr3R_13_23800001 chr3R_23800001 RAL-321 2922 chr3R 23808453 23808503 chr3R 23808598 23808648 32 142 6.0 8.5 7.2 3.9 195 chr3R 23808453 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808550 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808648 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_32_23805001 chr3R_23805001 RAL-321 2923 chr3R 23835391 23835432 chr3R 23844561 23844602 roo 16 9169 6.5 4.0 5.2 2.6 9211 chr3R 23835391 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844602 intron CG34355 + chr3R_16_23835001 chr3R_23835001 RAL-321 2924 chr3R 23851067 23851088 chr3R 23858754 23858775 opus 8 7687 5.0 12.5 8.8 0.8 7708 chr3R 23851067 3` UTR CG34355 + chr3R 23854921 intergenic not near genes chr3R 23858775 intergenic not near genes chr3R_8_23850001 chr3R_23850001 RAL-321 2925 chr3R 23888067 23888112 chr3R 23888173 23888218 21 105 6.0 6.0 6.0 3.0 151 chr3R 23888067 intron Pli - chr3R 23888142 intron Pli - chr3R 23888218 intron Pli - chr3R_21_23885001 chr3R_23885001 RAL-321 2926 chr3R 23944892 23944933 chr3R 23944997 23945038 21 104 3.0 6.5 4.8 3.6 146 chr3R 23944892 intron CG12268 - chr3R 23944965 intron CG12268 - chr3R 23945038 exon CG12268 - chr3R_21_23940001 chr3R_23940001 RAL-321 2927 chr3R 23949020 23949075 chr3R 23949117 23949172 28 96 3.5 7.0 5.2 4.5 152 chr3R 23949020 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949172 intergenic not near genes chr3R_28_23945001 chr3R_23945001 RAL-321 2928 chr3R 23969753 23969765 chr3R 23969870 23969882 4 116 16.5 10.5 13.5 0.3 129 chr3R 23969753 intron CG31140 + chr3R 23969818 intron CG31140 + chr3R 23969882 intron CG31140 + chr3R_4_23965001 chr3R_23965001 RAL-321 2929 chr3R 23969774 23969794 chr3R 23969866 23969911 17 110 6.0 9.0 7.5 2.0 137 chr3R 23969774 intron CG31140 + chr3R 23969842 intron CG31140 + chr3R 23969911 intron CG31140 + chr3R_17_23965001 chr3R_23965001 RAL-321 2930 chr3R 24011654 24011680 chr3R 24011757 24011783 4 103 4.0 6.0 5.0 0.7 129 chr3R 24011654 intron KrT95D - chr3R 24011718 intron KrT95D - chr3R 24011783 intron KrT95D - chr3R_4_24010001 chr3R_24010001 RAL-321 2931 chr3R 24015050 24015074 chr3R 24015146 24015155 4 92 12.0 0.0 6.0 0.6 105 chr3R 24015050 intron KrT95D - chr3R 24015102 intron KrT95D - chr3R 24015155 intron KrT95D - chr3R_4_24015001 chr3R_24015001 RAL-321 2932 chr3R 24072068 24072097 chr3R 24072525 24072555 jockey 12 455 10.0 9.5 9.8 1.1 487 chr3R 24072068 intron 4EHP - chr3R 24072312 intron 4EHP - chr3R 24072555 intron 4EHP - chr3R_12_24070001 chr3R_24070001 RAL-321 2933 chr3R 24076898 24076943 chr3R 24078385 24078430 hobo 20 1486 7.0 8.5 7.8 2.3 1532 chr3R 24076898 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078430 intron 4EHP - chr3R_20_24075001 chr3R_24075001 RAL-321 2934 chr3R 24116543 24116573 chr3R 24116666 24116696 17 123 6.0 6.0 6.0 2.4 153 chr3R 24116543 intron Rootletin + chr3R 24116620 intron Rootletin + chr3R 24116696 intron Rootletin + chr3R_17_24115001 chr3R_24115001 RAL-321 2935 chr3R 24199718 24199768 chr3R 24199818 24199868 15 99 5.5 6.5 6.0 2.1 150 chr3R 24199718 intron twin - chr3R 24199793 intron twin - chr3R 24199868 intron twin - chr3R_15_24195001 chr3R_24195001 RAL-321 2936 chr3R 24207199 24207243 chr3R 24212295 24212328 flea 17 5095 3.0 12.0 7.5 2.0 5129 chr3R 24207199 intron twin - chr3R 24209764 intron twin - chr3R 24212328 intron twin - chr3R_17_24205001 chr3R_24205001 RAL-321 2937 chr3R 24431579 24431627 chr3R 24431678 24431726 29 99 6.5 0.0 3.2 6.9 147 chr3R 24431579 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431726 intron nAChRalpha1 - chr3R_29_24430001 chr3R_24430001 RAL-321 2938 chr3R 24433469 24433505 chr3R 24433568 24433604 9 99 5.5 8.0 6.8 1.2 135 chr3R 24433469 intron nAChRalpha1 - chr3R 24433536 intron nAChRalpha1 - chr3R 24433604 intron nAChRalpha1 - chr3R_9_24430001 chr3R_24430001 RAL-321 2939 chr3R 24466444 24466497 chr3R 24466542 24466562 19 95 5.5 5.0 5.2 3.1 118 chr3R 24466444 intergenic not near genes chr3R 24466503 intergenic not near genes chr3R 24466562 intergenic not near genes chr3R_19_24465001 chr3R_24465001 RAL-321 2940 chr3R 24475065 24475118 chr3R 24475346 24475385 13 273 3.5 5.0 4.2 2.5 320 chr3R 24475065 intergenic not near genes chr3R 24475225 intergenic not near genes chr3R 24475385 intergenic not near genes chr3R_13_24475001 chr3R_24475001 RAL-321 2941 chr3R 24493259 24493304 chr3R 24493508 24493553 BS 25 247 12.5 11.5 12.0 1.9 294 chr3R 24493259 intergenic not near genes chr3R 24493406 intergenic not near genes chr3R 24493553 intergenic not near genes chr3R_25_24490001 chr3R_24490001 RAL-321 2942 chr3R 24598380 24598390 chr3R 24598444 24598494 6 96 0.5 5.5 3.0 1.5 114 chr3R 24598380 intron mld + chr3R 24598437 intron mld + chr3R 24598494 intron mld + chr3R_6_24595001 chr3R_24595001 RAL-321 2943 chr3R 24667586 24667625 chr3R 24667683 24667722 13 97 5.0 0.0 2.5 3.7 136 chr3R 24667586 intron slo + chr3R 24667654 intron slo + chr3R 24667722 intron slo + chr3R_13_24665001 chr3R_24665001 RAL-321 2944 chr3R 24730077 24730087 chr3R 24732475 24732485 Doc 4 2397 13.5 0.5 7.0 0.5 2408 chr3R 24730077 intron tok + chr3R 24731281 intron tok + chr3R 24732485 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-321 2945 chr3R 24730093 24730103 chr3R 24732468 24732496 Doc 9 2395 10.5 0.5 5.5 1.4 2403 chr3R 24730093 intron tok + chr3R 24731294 intron tok + chr3R 24732496 intron tok + chr3R_9_24730001 chr3R_24730001 RAL-321 2946 chr3R 24792002 24792040 chr3R 24792103 24792128 16 96 0.0 3.0 1.5 6.4 126 chr3R 24792002 intron Ets96B + chr3R 24792065 intron Ets96B + chr3R 24792128 intron Ets96B + chr3R_16_24790001 chr3R_24790001 RAL-321 2947 chr3R 24854872 24854913 chr3R 24854974 24855015 16 102 4.0 6.0 5.0 2.7 143 chr3R 24854872 3` UTR HdacX - chr3R 24854944 3` UTR HdacX - chr3R 24855015 3` UTR HdacX - chr3R_16_24850001 chr3R_24850001 RAL-321 2948 chr3R 24927108 24927125 chr3R 24931919 24931936 Doc 10 4810 12.0 9.0 10.5 0.9 4828 chr3R 24927108 intergenic Trf4-2 + chr3R 24929522 intergenic not near genes chr3R 24931936 intergenic CG11771 + chr3R_10_24925001 chr3R_24925001 RAL-321 2949 chr3R 24927126 24927152 chr3R 24931913 24931963 Doc 14 4808 4.5 7.0 5.8 2.1 4837 chr3R 24927126 intergenic Trf4-2 + chr3R 24929544 intergenic not near genes chr3R 24931963 intergenic CG11771 + chr3R_14_24925001 chr3R_24925001 RAL-321 2950 chr3R 25004896 25004920 chr3R 25004999 25005023 13 103 1.5 7.5 4.5 2.4 127 chr3R 25004896 intron tnc + chr3R 25004960 intron tnc + chr3R 25005023 intron tnc + chr3R_13_25000001 chr3R_25000001 RAL-321 2951 chr3R 25027516 25027566 chr3R 25027749 25027799 21 232 8.0 5.5 6.8 2.7 283 chr3R 25027516 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027799 intron Hr96 + chr3R_21_25025001 chr3R_25025001 RAL-321 2952 chr3R 25166236 25166248 chr3R 25166336 25166348 7 100 0.5 0.0 0.2 5.8 112 chr3R 25166236 intergenic not near genes chr3R 25166292 intergenic not near genes chr3R 25166348 intergenic not near genes chr3R_7_25165001 chr3R_25165001 RAL-321 2953 chr3R 25166249 25166392 chr3R 25166334 25166471 16 94 1.0 0.0 0.5 10.7 222 chr3R 25166249 intergenic not near genes chr3R 25166360 intergenic not near genes chr3R 25166471 intergenic not near genes chr3R_16_25165001 chr3R_25165001 RAL-321 2954 chr3R 25302133 25302184 chr3R 25302329 25302380 24 199 44.0 44.5 44.2 0.5 247 chr3R 25302133 exon CG13659 + chr3R 25302256 exon CG13659 + chr3R 25302380 intergenic CG13659 +,CG31370 + chr3R_24_25300001 chr3R_25300001 RAL-321 2955 chr3R 25368455 25368485 chr3R 25368593 25368623 16 138 6.5 0.0 3.2 3.8 168 chr3R 25368455 intron Fur1 - chr3R 25368539 intron Fur1 - chr3R 25368623 intron Fur1 - chr3R_16_25365001 chr3R_25365001 RAL-321 2956 chr3R 25387536 25387575 chr3R 25387631 25387676 11 100 19.0 18.5 18.8 0.6 140 chr3R 25387536 intron Fur1 - chr3R 25387606 intron Fur1 - chr3R 25387676 intron Fur1 - chr3R_11_25385001 chr3R_25385001 RAL-321 2957 chr3R 25411758 25411806 chr3R 25411875 25411929 12 119 1.5 4.5 3.0 3.0 171 chr3R 25411758 intron Fur1 - chr3R 25411844 intron Fur1 - chr3R 25411929 intron Fur1 - chr3R_12_25410001 chr3R_25410001 RAL-321 2958 chr3R 25514415 25514446 chr3R 25514516 25514547 13 101 0.5 6.5 3.5 2.9 132 chr3R 25514415 intergenic not near genes chr3R 25514481 intergenic not near genes chr3R 25514547 intergenic not near genes chr3R_13_25510001 chr3R_25510001 RAL-321 2959 chr3R 25570024 25570071 chr3R 25570135 25570168 5 103 13.0 9.0 11.0 0.4 144 chr3R 25570024 intron msi + chr3R 25570096 intron msi + chr3R 25570168 intron msi + chr3R_5_25570001 chr3R_25570001 RAL-321 2960 chr3R 25607442 25607453 chr3R 25607549 25607560 4 107 6.5 0.0 3.2 1.0 118 chr3R 25607442 3` UTR,intron msi +,ymp - chr3R 25607501 3` UTR,intron msi +,ymp - chr3R 25607560 3` UTR,intron msi +,ymp - chr3R_4_25605001 chr3R_25605001 RAL-321 2961 chr3R 25671219 25671274 chr3R 25671337 25671394 11 117 5.0 5.5 5.2 1.8 175 chr3R 25671219 intron Lgr3 + chr3R 25671306 intron Lgr3 + chr3R 25671394 intron Lgr3 + chr3R_11_25670001 chr3R_25670001 RAL-321 2962 chr3R 25702264 25702304 chr3R 25702693 25702733 16 425 3.5 3.0 3.2 3.8 469 chr3R 25702264 intron LpR2 - chr3R 25702498 intron LpR2 - chr3R 25702733 intron LpR2 - chr3R_16_25700001 chr3R_25700001 RAL-321 2963 chr3R 25721250 25721295 chr3R 25721348 25721396 20 99 4.0 2.5 3.2 4.8 146 chr3R 25721250 intron LpR2 - chr3R 25721323 intron LpR2 - chr3R 25721396 intron LpR2 - chr3R_20_25720001 chr3R_25720001 RAL-321 2964 chr3R 25725811 25725860 chr3R 25734991 25735040 roo 22 9179 7.0 9.0 8.0 2.4 9229 chr3R 25725811 intron LpR2 - chr3R 25730426 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_22_25730001 chr3R_25730001 RAL-321 2965 chr3R 25738615 25738664 chr3R 25738720 25738772 22 108 8.0 6.5 7.2 2.7 157 chr3R 25738615 intron LpR2 - chr3R 25738694 intron LpR2 - chr3R 25738772 intron LpR2 - chr3R_22_25735001 chr3R_25735001 RAL-321 2966 chr3R 25832693 25832722 chr3R 25841874 25841924 roo 10 9198 6.5 7.5 7.0 1.2 9231 chr3R 25832693 exon alpha4GT2 + chr3R 25837308 intron alpha4GT2 + chr3R 25841924 exon alpha4GT2 + chr3R_10_25835001 chr3R_25835001 RAL-321 2967 chr3R 25861807 25861848 chr3R 25861904 25861945 19 96 7.0 8.0 7.5 2.2 138 chr3R 25861807 intron CG5890 + chr3R 25861876 intron CG5890 + chr3R 25861945 intron CG5890 + chr3R_19_25860001 chr3R_25860001 RAL-321 2968 chr3R 25873281 25873330 chr3R 25873418 25873467 29 136 7.5 6.5 7.0 3.6 186 chr3R 25873281 3` UTR Tsp96F - chr3R 25873374 3` UTR Tsp96F - chr3R 25873467 3` UTR Tsp96F - chr3R_29_25870001 chr3R_25870001 RAL-321 2969 chr3R 25932728 25932756 chr3R 25933140 25933168 15 412 6.5 3.5 5.0 2.5 440 chr3R 25932728 intron CCAP-R - chr3R 25932948 intron CCAP-R - chr3R 25933168 intron CCAP-R - chr3R_15_25930001 chr3R_25930001 RAL-321 2970 chr3R 25962032 25962074 chr3R 25962148 25962190 25 115 9.0 6.0 7.5 2.9 158 chr3R 25962032 5` UTR boss + chr3R 25962111 intron boss + chr3R 25962190 intron boss + chr3R_25_25960001 chr3R_25960001 RAL-321 2971 chr3R 26093823 26093866 chr3R 26093921 26093964 15 97 5.0 5.5 5.2 2.4 141 chr3R 26093823 intron dys - chr3R 26093894 intron dys - chr3R 26093964 intron dys - chr3R_15_26090001 chr3R_26090001 RAL-321 2972 chr3R 26122442 26122479 chr3R 26122538 26122542 11 82 6.0 6.0 6.0 1.6 100 chr3R 26122442 intron CG31324 + chr3R 26122492 intron CG31324 + chr3R 26122542 intron CG31324 + chr3R_11_26120001 chr3R_26120001 RAL-321 2973 chr3R 26126448 26126502 chr3R 26126622 26126676 30 174 7.0 7.5 7.2 3.7 228 chr3R 26126448 intron CG31324 + chr3R 26126562 intron CG31324 + chr3R 26126676 intron,5` UTR CG31324 +,CG14556 + chr3R_30_26125001 chr3R_26125001 RAL-321 2974 chr3R 26215774 26215796 chr3R 26221743 26221770 297 4 5973 6.5 4.0 5.2 0.6 5996 chr3R 26215774 intergenic not near genes chr3R 26218772 intergenic not near genes chr3R 26221770 intergenic not near genes chr3R_4_26215001 chr3R_26215001 RAL-321 2975 chr3R 26292088 26292135 chr3R 26292188 26292235 10 98 4.0 2.5 3.2 2.4 147 chr3R 26292088 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292235 intergenic not near genes chr3R_10_26290001 chr3R_26290001 RAL-321 2976 chr3R 26370321 26370361 chr3R 26370424 26370464 15 103 0.0 7.5 3.8 3.1 143 chr3R 26370321 intergenic not near genes chr3R 26370392 intergenic not near genes chr3R 26370464 intergenic not near genes chr3R_15_26370001 chr3R_26370001 RAL-321 2977 chr3R 26376305 26376356 chr3R 26385485 26385520 roo 17 9176 5.0 0.0 2.5 4.9 9215 chr3R 26376305 intergenic not near genes chr3R 26380912 intergenic not near genes chr3R 26385520 intergenic not near genes chr3R_17_26380001 chr3R_26380001 RAL-321 2978 chr3R 26387299 26387349 chr3R 26387396 26387415 13 87 6.0 5.5 5.8 1.9 116 chr3R 26387299 intergenic not near genes chr3R 26387357 intergenic not near genes chr3R 26387415 intergenic not near genes chr3R_13_26385001 chr3R_26385001 RAL-321 2979 chr3R 26425889 26425909 chr3R 26425971 26425990 4 82 5.0 4.0 4.5 0.7 101 chr3R 26425889 intron CR31084 + chr3R 26425940 intron CR31084 + chr3R 26425990 intron CR31084 + chr3R_4_26425001 chr3R_26425001 RAL-321 2980 chr3R 26433556 26433599 chr3R 26433645 26433696 24 93 4.5 3.0 3.8 5.0 140 chr3R 26433556 intergenic not near genes chr3R 26433626 intergenic not near genes chr3R 26433696 intergenic not near genes chr3R_24_26430001 chr3R_26430001 RAL-321 2981 chr3R 26463757 26463809 chr3R 26463950 26464001 24 192 3.5 6.5 5.0 4.0 244 chr3R 26463757 intron CG5455 + chr3R 26463879 intron CG5455 + chr3R 26464001 intron CG5455 + chr3R_24_26460001 chr3R_26460001 RAL-321 2982 chr3R 26468260 26468271 chr3R 26472869 26472896 9 4606 17.5 47.5 32.5 0.3 4636 chr3R 26468260 exon CG5455 + chr3R 26470578 3` UTR plum - chr3R 26472896 3` UTR plum - chr3R_9_26470001 chr3R_26470001 RAL-321 2983 chr3R 26510510 26510518 chr3R 26519591 26519599 roo 6 9081 0.0 14.5 7.2 0.7 9089 chr3R 26510510 intron plum - chr3R 26515054 intron plum - chr3R 26519599 intron,5` UTR plum -,CR45226 + chr3R_6_26515001 chr3R_26515001 RAL-321 2984 chr3R 26523378 26523411 chr3R 26523480 26523514 12 102 2.0 9.0 5.5 1.8 136 chr3R 26523378 intron plum - chr3R 26523446 intron plum - chr3R 26523514 intron plum - chr3R_12_26520001 chr3R_26520001 RAL-321 2985 chr3R 26529325 26529380 chr3R 26529428 26529483 23 102 6.0 0.0 3.0 5.8 158 chr3R 26529325 intron plum - chr3R 26529404 intron plum - chr3R 26529483 intron plum - chr3R_23_26525001 chr3R_26525001 RAL-321 2986 chr3R 26558308 26558355 chr3R 26565641 26565687 Stalker4 21 7331 4.5 3.5 4.0 4.2 7379 chr3R 26558308 intron scrib + chr3R 26561998 intron scrib + chr3R 26565687 intron scrib + chr3R_21_26560001 chr3R_26560001 RAL-321 2987 chr3R 26574985 26575036 chr3R 26575084 26575123 18 97 4.0 5.5 4.8 3.1 138 chr3R 26574985 exon scrib + chr3R 26575054 intron scrib + chr3R 26575123 intron scrib + chr3R_18_26575001 chr3R_26575001 RAL-321 2988 chr3R 26641616 26641658 chr3R 26641723 26641765 13 102 5.0 7.5 6.2 1.8 149 chr3R 26641616 intergenic not near genes chr3R 26641690 intergenic not near genes chr3R 26641765 intergenic not near genes chr3R_13_26640001 chr3R_26640001 RAL-321 2989 chr3R 26642717 26642756 chr3R 26643130 26643169 jockey 19 410 10.0 9.5 9.8 1.8 452 chr3R 26642717 intergenic not near genes chr3R 26642943 intergenic not near genes chr3R 26643169 intergenic not near genes chr3R_19_26640001 chr3R_26640001 RAL-321 2990 chr3R 26688847 26688862 chr3R 26688945 26688960 10 98 8.0 6.0 7.0 1.2 113 chr3R 26688847 intergenic not near genes chr3R 26688904 intergenic not near genes chr3R 26688960 intergenic not near genes chr3R_10_26685001 chr3R_26685001 RAL-321 2991 chr3R 26728460 26728512 chr3R 26728566 26728617 17 100 5.5 6.5 6.0 2.4 157 chr3R 26728460 intron CG14246 + chr3R 26728538 intron CG14246 + chr3R 26728617 intron CG14246 + chr3R_17_26725001 chr3R_26725001 RAL-321 2992 chr3R 26732164 26732213 chr3R 26732309 26732360 25 146 6.5 6.0 6.2 3.5 196 chr3R 26732164 intergenic not near genes chr3R 26732262 intergenic not near genes chr3R 26732360 intergenic not near genes chr3R_25_26730001 chr3R_26730001 RAL-321 2993 chr3R 26770223 26770271 chr3R 26770320 26770368 16 94 8.5 7.0 7.8 1.8 145 chr3R 26770223 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770368 intergenic not near genes chr3R_16_26770001 chr3R_26770001 RAL-321 2994 chr3R 26810532 26810579 chr3R 26811037 26811084 roo 21 505 6.5 3.5 5.0 3.5 552 chr3R 26810532 intron Tl + chr3R 26810808 intron Tl + chr3R 26811084 intron Tl + chr3R_21_26810001 chr3R_26810001 RAL-321 2995 chr3R 26898617 26898642 chr3R 26899011 26899036 14 392 4.5 4.5 4.5 2.5 419 chr3R 26898617 intron T48 + chr3R 26898826 intron T48 + chr3R 26899036 intron T48 + chr3R_14_26895001 chr3R_26895001 RAL-321 2996 chr3R 27007386 27007431 chr3R 27016541 27016586 roo 20 9155 7.0 10.0 8.5 2.1 9200 chr3R 27007386 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016586 intron RYa-R + chr3R_20_27010001 chr3R_27010001 RAL-321 2997 chr3R 27027661 27027689 chr3R 27027765 27027791 5 103 5.0 4.5 4.8 0.9 130 chr3R 27027661 intron RYa-R + chr3R 27027726 intron RYa-R + chr3R 27027791 intron RYa-R + chr3R_5_27025001 chr3R_27025001 RAL-321 2998 chr3R 27028701 27028756 chr3R 27028800 27028855 15 98 5.5 5.0 5.2 2.4 154 chr3R 27028701 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_15_27025001 chr3R_27025001 RAL-321 2999 chr3R 27030312 27030326 chr3R 27030621 27030635 8 309 5.5 7.0 6.2 1.1 323 chr3R 27030312 intron RYa-R + chr3R 27030474 intron RYa-R + chr3R 27030635 intron RYa-R + chr3R_8_27030001 chr3R_27030001 RAL-321 3000 chr3R 27030327 27030335 chr3R 27030609 27030644 7 305 4.5 5.0 4.8 1.2 317 chr3R 27030327 intron RYa-R + chr3R 27030486 intron RYa-R + chr3R 27030644 intron RYa-R + chr3R_7_27030001 chr3R_27030001 RAL-321 3001 chr3R 27140495 27140548 chr3R 27148125 27148178 412 24 7629 5.0 9.0 7.0 3.0 7683 chr3R 27140495 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148178 intron CG6051 - chr3R_24_27140001 chr3R_27140001 RAL-321 3002 chr3R 27225564 27225610 chr3R 27225675 27225721 13 110 3.5 3.0 3.2 3.1 157 chr3R 27225564 intergenic not near genes chr3R 27225642 intergenic not near genes chr3R 27225721 intergenic not near genes chr3R_13_27225001 chr3R_27225001 RAL-321 3003 chr3R 27275838 27275874 chr3R 27275928 27275978 18 103 8.0 5.5 6.8 2.3 140 chr3R 27275838 intron CG5938 + chr3R 27275908 intron CG5938 + chr3R 27275978 intron CG5938 + chr3R_18_27275001 chr3R_27275001 RAL-321 3004 chr3R 27299710 27299733 chr3R 27299812 27299822 6 100 5.5 13.5 9.5 0.6 112 chr3R 27299710 intron CG3339 - chr3R 27299766 intron CG3339 - chr3R 27299822 intron CG3339 - chr3R_6_27295001 chr3R_27295001 RAL-321 3005 chr3R 27300490 27300527 chr3R 27300587 27300603 6 93 0.0 6.0 3.0 1.5 113 chr3R 27300490 intron CG3339 - chr3R 27300546 intron CG3339 - chr3R 27300603 intron CG3339 - chr3R_6_27300001 chr3R_27300001 RAL-321 3006 chr3R 27300839 27300872 chr3R 27300951 27300983 10 110 10.0 3.5 6.8 1.3 144 chr3R 27300839 intron CG3339 - chr3R 27300911 intron CG3339 - chr3R 27300983 intron CG3339 - chr3R_10_27300001 chr3R_27300001 RAL-321 3007 chr3R 27327405 27327455 chr3R 27327504 27327554 26 97 4.5 4.5 4.5 4.7 149 chr3R 27327405 intergenic not near genes chr3R 27327480 intergenic not near genes chr3R 27327554 intergenic not near genes chr3R_26_27325001 chr3R_27325001 RAL-321 3008 chr3R 27329453 27329501 chr3R 27329550 27329598 25 96 9.0 4.5 6.8 3.2 145 chr3R 27329453 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329598 intergenic CG3330 - chr3R_25_27325001 chr3R_27325001 RAL-321 3009 chr3R 27342778 27342824 chr3R 27351377 27351425 Tirant 19 8599 3.0 4.5 3.8 4.0 8647 chr3R 27342778 intron CG42534 + chr3R 27347102 intron CG42534 + chr3R 27351425 intron CG42534 + chr3R_19_27345001 chr3R_27345001 RAL-321 3010 chr3R 27377465 27377494 chr3R 27377562 27377587 12 103 7.0 5.5 6.2 1.7 122 chr3R 27377465 3` UTR side - chr3R 27377526 3` UTR side - chr3R 27377587 3` UTR side - chr3R_12_27375001 chr3R_27375001 RAL-321 3011 chr3R 27445226 27445279 chr3R 27445323 27445376 23 93 3.5 6.0 4.8 4.0 150 chr3R 27445226 intergenic not near genes chr3R 27445301 intergenic not near genes chr3R 27445376 intergenic not near genes chr3R_23_27445001 chr3R_27445001 RAL-321 3012 chr3R 27496573 27496604 chr3R 27496697 27496707 16 123 7.5 5.5 6.5 2.1 134 chr3R 27496573 intergenic not near genes chr3R 27496640 intergenic not near genes chr3R 27496707 intergenic not near genes chr3R_16_27495001 chr3R_27495001 RAL-321 3013 chr3R 27506279 27506318 chr3R 27506381 27506420 9 102 0.5 4.0 2.2 2.8 141 chr3R 27506279 intergenic not near genes chr3R 27506350 intergenic not near genes chr3R 27506420 intergenic not near genes chr3R_9_27505001 chr3R_27505001 RAL-321 3014 chr3R 27521135 27521188 chr3R 27530364 27530417 roo 21 9229 4.0 3.0 3.5 4.7 9282 chr3R 27521135 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530417 intron CG12885 + chr3R_21_27525001 chr3R_27525001 RAL-321 3015 chr3R 27574083 27574136 chr3R 27574502 27574520 20 409 2.5 4.0 3.2 4.8 437 chr3R 27574083 intron wdb - chr3R 27574302 intron wdb - chr3R 27574520 intron wdb - chr3R_20_27570001 chr3R_27570001 RAL-321 3016 chr3R 27594716 27594767 chr3R 27594821 27594867 6 101 2.5 2.5 2.5 1.7 151 chr3R 27594716 intron CG5639 - chr3R 27594792 intron CG5639 - chr3R 27594867 intron CG5639 - chr3R_6_27590001 chr3R_27590001 RAL-321 3017 chr3R 27660700 27660735 chr3R 27660796 27660830 13 96 6.5 10.5 8.5 1.4 130 chr3R 27660700 intergenic not near genes chr3R 27660765 intergenic not near genes chr3R 27660830 intergenic not near genes chr3R_13_27660001 chr3R_27660001 RAL-321 3018 chr3R 27695027 27695060 chr3R 27695147 27695156 9 117 11.0 5.0 8.0 1.0 129 chr3R 27695027 3` UTR Acp98AB + chr3R 27695092 intergenic Acp98AB +,CG43320 + chr3R 27695156 intergenic CG43320 +,Acp98AB + chr3R_9_27695001 chr3R_27695001 RAL-321 3019 chr3R 27706757 27706796 chr3R 27706853 27706892 27 95 6.5 9.0 7.8 3.1 135 chr3R 27706757 intergenic CG12428 -,CG12877 + chr3R 27706824 intergenic CG12428 -,CG12877 + chr3R 27706892 intergenic CG12428 -,CG12877 + chr3R_27_27705001 chr3R_27705001 RAL-321 3020 chr3R 27725548 27725587 chr3R 27731010 27731050 I-element 4 5463 8.5 0.5 4.5 0.7 5502 chr3R 27725548 intergenic not near genes chr3R 27728299 intergenic not near genes chr3R 27731050 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-321 3021 chr3R 27779251 27779289 chr3R 27779348 27779383 12 93 5.0 8.5 6.8 1.5 132 chr3R 27779251 exon CG34353 - chr3R 27779317 intron CG34353 - chr3R 27779383 intron CG34353 - chr3R_12_27775001 chr3R_27775001 RAL-321 3022 chr3R 27791630 27791645 chr3R 27794796 27794811 Rt1c 4 3166 16.5 11.0 13.8 0.3 3181 chr3R 27791630 intron CG34353 - chr3R 27793220 intron CG34353 - chr3R 27794811 intron CG34353 - chr3R_4_27790001 chr3R_27790001 RAL-321 3023 chr3R 27856741 27856788 chr3R 27858243 27858291 hopper2 24 1502 11.5 7.0 9.2 2.4 1550 chr3R 27856741 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858291 intron CG34353 - chr3R_24_27855001 chr3R_27855001 RAL-321 3024 chr3R 27862936 27862984 chr3R 27868261 27868309 Transpac 20 5319 6.5 5.0 5.8 2.9 5373 chr3R 27862936 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868309 intron CG34353 - chr3R_20_27865001 chr3R_27865001 RAL-321 3025 chr3R 27875692 27875730 chr3R 27882757 27882785 297 21 7072 7.5 8.0 7.8 2.4 7093 chr3R 27875692 intron CG34353 - chr3R 27879238 intron CG34353 - chr3R 27882785 intron CG34353 - chr3R_21_27875001 chr3R_27875001 RAL-321 3026 chr3R 27953340 27953385 chr3R 27953492 27953531 25 149 4.5 5.0 4.8 4.3 191 chr3R 27953340 exon CG4951 - chr3R 27953436 intron CG4951 - chr3R 27953531 exon CG4951 - chr3R_25_27950001 chr3R_27950001 RAL-321 3027 chr3R 28068477 28068524 chr3R 28073939 28073986 I-element 12 5460 1.5 4.5 3.0 3.0 5509 chr3R 28068477 intron CG34362 + chr3R 28071232 intron CG34362 + chr3R 28073986 intron CG34362 + chr3R_12_28070001 chr3R_28070001 RAL-321 3028 chr3R 28104438 28104492 chr3R 28104774 28104826 30 332 5.0 4.0 4.5 5.5 388 chr3R 28104438 intergenic not near genes chr3R 28104632 intergenic not near genes chr3R 28104826 intergenic not near genes chr3R_30_28100001 chr3R_28100001 RAL-321 3029 chr3R 28173651 28173701 chr3R 28181101 28181151 mdg1 14 7449 8.0 6.5 7.2 1.7 7500 chr3R 28173651 intron CG34354 + chr3R 28177401 intron CG34354 + chr3R 28181151 intron CG34354 + chr3R_14_28175001 chr3R_28175001 RAL-321 3030 chr3R 28253325 28253368 chr3R 28255855 28255898 jockey 10 2526 7.5 10.0 8.8 1.0 2573 chr3R 28253325 intergenic not near genes chr3R 28254612 intergenic not near genes chr3R 28255898 intergenic not near genes chr3R_10_28250001 chr3R_28250001 RAL-321 3031 chr3R 28302087 28302130 chr3R 28302546 28302564 jockey 21 458 10.5 9.0 9.8 1.9 477 chr3R 28302087 intergenic not near genes chr3R 28302326 intergenic not near genes chr3R 28302564 intergenic not near genes chr3R_21_28300001 chr3R_28300001 RAL-321 3032 chr3R 28331488 28331528 chr3R 28331587 28331627 17 99 6.5 6.5 6.5 2.3 139 chr3R 28331488 intron larp - chr3R 28331558 intron larp - chr3R 28331627 intron larp - chr3R_17_28330001 chr3R_28330001 RAL-321 3033 chr3R 28352494 28352543 chr3R 28352854 28352903 27 359 4.5 6.5 5.5 4.2 409 chr3R 28352494 exon Or98b + chr3R 28352698 exon Or98b + chr3R 28352903 exon Or98b + chr3R_27_28350001 chr3R_28350001 RAL-321 3034 chr3R 28393677 28393945 chr3R 28393797 28394043 48 112 6.0 7.5 6.8 6.2 366 chr3R 28393677 intergenic not near genes chr3R 28393860 intergenic not near genes chr3R 28394043 intergenic not near genes chr3R_48_28390001 chr3R_28390001 RAL-321 3035 chr3R 28407699 28407729 chr3R 28407793 28407835 11 102 4.0 4.0 4.0 2.2 136 chr3R 28407699 intergenic not near genes chr3R 28407767 intergenic not near genes chr3R 28407835 intergenic not near genes chr3R_11_28405001 chr3R_28405001 RAL-321 3036 chr3R 28424068 28424109 chr3R 28424220 28424267 30 157 5.0 10.0 7.5 3.5 199 chr3R 28424068 intron beat-VI + chr3R 28424168 intron beat-VI + chr3R 28424267 intron beat-VI + chr3R_30_28420001 chr3R_28420001 RAL-321 3037 chr3R 28568152 28568193 chr3R 28569028 28569059 13 882 5.5 10.0 7.8 1.5 907 chr3R 28568152 intergenic not near genes chr3R 28568606 intergenic not near genes chr3R 28569059 intergenic not near genes chr3R_13_28565001 chr3R_28565001 RAL-321 3038 chr3R 28594094 28594103 chr3R 28594193 28594202 5 99 9.5 10.5 10.0 0.5 108 chr3R 28594094 5` UTR CR43440 + chr3R 28594148 5` UTR CR43440 + chr3R 28594202 5` UTR CR43440 + chr3R_5_28590001 chr3R_28590001 RAL-321 3039 chr3R 28594116 28594130 chr3R 28594182 28594229 13 95 4.0 8.0 6.0 1.9 113 chr3R 28594116 5` UTR CR43440 + chr3R 28594172 5` UTR CR43440 + chr3R 28594229 5` UTR CR43440 + chr3R_13_28590001 chr3R_28590001 RAL-321 3040 chr3R 28616454 28616500 chr3R 28616568 28616614 20 114 0.0 6.5 3.2 4.8 160 chr3R 28616454 intron CG10011 - chr3R 28616534 intron CG10011 - chr3R 28616614 intron CG10011 - chr3R_20_28615001 chr3R_28615001 RAL-321 3041 chr3R 28695750 28695756 chr3R 28695869 28695875 5 119 13.5 7.0 10.2 0.4 125 chr3R 28695750 3` UTR CG9990 + chr3R 28695812 3` UTR CG9990 + chr3R 28695875 3` UTR CG9990 + chr3R_5_28695001 chr3R_28695001 RAL-321 3042 chr3R 28758264 28758285 chr3R 28763901 28763922 roo 8 5637 12.5 1.0 6.8 1.0 5658 chr3R 28758264 intergenic aqrs - chr3R 28761093 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_8_28760001 chr3R_28760001 RAL-321 3043 chr3R 28758313 28758316 chr3R 28771340 28771343 Stalker4 5 13027 2.5 0.0 1.2 2.3 13030 chr3R 28758313 intergenic aqrs - chr3R 28764828 intergenic not near genes chr3R 28771343 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-321 3044 chr3R 28763900 28763914 chr3R 28771363 28771377 Stalker4 8 7463 0.0 0.0 0.0 8.0 7477 chr3R 28763900 intergenic not near genes chr3R 28767638 intergenic not near genes chr3R 28771377 intergenic not near genes chr3R_8_28765001 chr3R_28765001 RAL-321 3045 chr3R 28792857 28792901 chr3R 28797966 28798016 jockey 12 5110 0.0 6.0 3.0 3.0 5159 chr3R 28792857 intergenic not near genes chr3R 28795436 intergenic not near genes chr3R 28798016 intergenic not near genes chr3R_12_28795001 chr3R_28795001 RAL-321 3046 chr3R 28811557 28811603 chr3R 28811723 28811769 21 165 9.5 7.5 8.5 2.2 212 chr3R 28811557 intergenic wdn - chr3R 28811663 intergenic wdn -,CG1646 + chr3R 28811769 intergenic CG1646 +,wdn - chr3R_21_28810001 chr3R_28810001 RAL-321 3047 chr3R 21907534 21907536 chr3R 28831799 28831802 21 6924266 27.5 20.0 23.8 0.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_21_25365001 chr3R_25365001 RAL-321 3048 chr3R 28971150 28971192 chr3R 28971248 28971293 12 100 6.0 6.5 6.2 1.7 143 chr3R 28971150 5` UTR CR45669 + chr3R 28971222 5` UTR CR45669 + chr3R 28971293 5` UTR CR45669 + chr3R_12_28970001 chr3R_28970001 RAL-321 3049 chr3R 21907534 21907536 chr3R 29013339 29013339 4 7105804 27.5 15.5 21.5 0.2 7105805 chr3R 21907534 intergenic CG6678 + chr3R 25460436 intron Fur1 - chr3R 29013339 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-321 3050 chr3R 21907534 21907535 chr3R 29013340 29013340 4 7105806 27.0 15.5 21.2 0.2 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-321 3051 chr3R 29019354 29019407 chr3R 29019486 29019539 26 132 0.0 5.0 2.5 7.4 185 chr3R 29019354 intron wat - chr3R 29019446 intron wat - chr3R 29019539 intron wat - chr3R_26_29015001 chr3R_29015001 RAL-321 3052 chr3R 29032725 29032752 chr3R 29032822 29032849 12 94 13.5 3.5 8.5 1.3 124 chr3R 29032725 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032787 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032849 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_12_29030001 chr3R_29030001 RAL-321 3053 chr3R 29032753 29032777 chr3R 29032820 29032859 8 85 6.5 3.0 4.8 1.4 106 chr3R 29032753 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032806 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032859 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_8_29030001 chr3R_29030001 RAL-321 3054 chr3R 29070037 29070078 chr3R 29070138 29070179 16 101 9.5 11.5 10.5 1.4 142 chr3R 29070037 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070179 intron CG11873 + chr3R_16_29070001 chr3R_29070001 RAL-321 3055 chr3R 29079360 29079410 chr3R 29080752 29080802 NOF 22 1392 4.0 10.5 7.2 2.7 1442 chr3R 29079360 intron CG11873 + chr3R 29080081 intron CG11873 + chr3R 29080802 intron CG11873 + chr3R_22_29080001 chr3R_29080001 RAL-321 3056 chr3R 29091413 29091426 chr3R 29091520 29091526 5 106 8.0 13.0 10.5 0.4 113 chr3R 29091413 intron CG11873 + chr3R 29091470 intron CG11873 + chr3R 29091526 intron CG11873 + chr3R_5_29090001 chr3R_29090001 RAL-321 3057 chr3R 29128509 29128516 chr3R 29128619 29128626 4 110 0.0 18.0 9.0 0.4 117 chr3R 29128509 intergenic dgt6 -,CG11880 + chr3R 29128568 intergenic dgt6 -,CG11880 + chr3R 29128626 3` UTR dgt6 - chr3R_4_29125001 chr3R_29125001 RAL-321 3058 chr3R 29213059 29213093 chr3R 29213162 29213196 13 103 5.0 5.0 5.0 2.2 137 chr3R 29213059 intergenic not near genes chr3R 29213128 intergenic not near genes chr3R 29213196 intergenic not near genes chr3R_13_29210001 chr3R_29210001 RAL-321 3059 chr3R 29239206 29239243 chr3R 29245517 29245549 11 6304 2.0 31.0 16.5 0.6 6343 chr3R 29239206 exon CG31427 - chr3R 29242378 exon CG31445 - chr3R 29245549 exon SP1029 - chr3R_11_29240001 chr3R_29240001 RAL-321 3060 chr3R 29237529 29237540 chr3R 29239417 29239428 8 1888 39.5 8.5 24.0 0.3 1899 chr3R 29237529 exon CG11951 - chr3R 29238478 intron CG11951 - chr3R 29239428 exon CG31427 - chr3R_8_29235001 chr3R_29235001 RAL-321 3061 chr3R 29240291 29240333 chr3R 29240395 29240427 20 103 6.0 0.0 3.0 5.0 136 chr3R 29240291 intron CG31427 - chr3R 29240359 5` UTR CG31427 - chr3R 29240427 intergenic CG31427 -,CG31445 - chr3R_20_29240001 chr3R_29240001 RAL-321 3062 chr3R 29256258 29256286 chr3R 29256358 29256386 12 98 7.0 7.5 7.2 1.5 128 chr3R 29256258 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256386 intergenic CG45544 + chr3R_12_29255001 chr3R_29255001 RAL-321 3063 chr3R 29256289 29256300 chr3R 29256344 29256400 6 89 5.0 4.0 4.5 1.1 111 chr3R 29256289 intergenic CG45544 +,stg - chr3R 29256344 intergenic CG45544 + chr3R 29256400 intergenic CG45544 + chr3R_6_29255001 chr3R_29255001 RAL-321 3064 chr3R 29264185 29264208 chr3R 29264307 29264330 12 122 0.0 5.5 2.8 3.2 145 chr3R 29264185 intergenic not near genes chr3R 29264258 intergenic not near genes chr3R 29264330 intergenic not near genes chr3R_12_29260001 chr3R_29260001 RAL-321 3065 chr3R 29288020 29288068 chr3R 29288128 29288176 22 108 6.5 6.5 6.5 2.9 156 chr3R 29288020 intergenic not near genes chr3R 29288098 intergenic not near genes chr3R 29288176 intergenic not near genes chr3R_22_29285001 chr3R_29285001 RAL-321 3066 chr3R 29356025 29356079 chr3R 29356125 29356180 16 99 6.5 3.5 5.0 2.7 155 chr3R 29356025 intergenic CR45547 - chr3R 29356102 intergenic CR45547 - chr3R 29356180 3` UTR CR45547 - chr3R_16_29355001 chr3R_29355001 RAL-321 3067 chr3R 29360226 29360232 chr3R 29360324 29360330 4 98 7.5 4.5 6.0 0.6 104 chr3R 29360226 intergenic not near genes chr3R 29360278 intergenic not near genes chr3R 29360330 intergenic not near genes chr3R_4_29360001 chr3R_29360001 RAL-321 3068 chr3R 29372708 29372723 chr3R 29372804 29372819 8 96 7.0 8.0 7.5 0.9 111 chr3R 29372708 intergenic not near genes chr3R 29372764 intergenic not near genes chr3R 29372819 intergenic not near genes chr3R_8_29370001 chr3R_29370001 RAL-321 3069 chr3R 29376341 29376502 chr3R 29376449 29376605 10 108 1.5 0.5 1.0 5.0 264 chr3R 29376341 intergenic not near genes chr3R 29376473 intergenic not near genes chr3R 29376605 intergenic not near genes chr3R_10_29375001 chr3R_29375001 RAL-321 3070 chr3R 29406601 29406643 chr3R 29407906 29407949 jockey 17 1305 7.0 8.5 7.8 1.9 1348 chr3R 29406601 intron Ptp99A + chr3R 29407275 intron Ptp99A + chr3R 29407949 intron Ptp99A + chr3R_17_29405001 chr3R_29405001 RAL-321 3071 chr3R 29445337 29445352 chr3R 29445437 29445450 9 98 11.0 3.0 7.0 1.1 113 chr3R 29445337 intron Ptp99A + chr3R 29445394 intron Ptp99A + chr3R 29445450 intron Ptp99A + chr3R_9_29445001 chr3R_29445001 RAL-321 3072 chr3R 29539425 29539458 chr3R 29539509 29539524 7 89 2.5 0.0 1.2 3.2 99 chr3R 29539425 intergenic not near genes chr3R 29539474 intergenic not near genes chr3R 29539524 intergenic not near genes chr3R_7_29535001 chr3R_29535001 RAL-321 3073 chr3R 29576748 29577002 chr3R 29576869 29577103 13 110 4.0 0.0 2.0 4.3 355 chr3R 29576748 intergenic not near genes chr3R 29576926 intergenic not near genes chr3R 29577103 intergenic not near genes chr3R_13_29575001 chr3R_29575001 RAL-321 3074 chr3R 29581531 29581564 chr3R 29581633 29581665 13 101 3.5 1.5 2.5 3.7 134 chr3R 29581531 intergenic not near genes chr3R 29581598 intergenic not near genes chr3R 29581665 intergenic not near genes chr3R_13_29580001 chr3R_29580001 RAL-321 3075 chr3R 29590356 29590401 chr3R 29590469 29590514 26 113 5.0 4.0 4.5 4.7 158 chr3R 29590356 exon CG31041 - chr3R 29590435 intron CG31041 - chr3R 29590514 exon CG31041 - chr3R_26_29590001 chr3R_29590001 RAL-321 3076 chr3R 29648990 29649008 chr3R 29649100 29649118 11 109 8.0 6.5 7.2 1.3 128 chr3R 29648990 intron Dop1R2 - chr3R 29649054 intron Dop1R2 - chr3R 29649118 intron Dop1R2 - chr3R_11_29645001 chr3R_29645001 RAL-321 3077 chr3R 29649644 29649692 chr3R 29649733 29649789 17 96 6.0 5.0 5.5 2.6 145 chr3R 29649644 intron Dop1R2 - chr3R 29649716 intron Dop1R2 - chr3R 29649789 intron Dop1R2 - chr3R_17_29645001 chr3R_29645001 RAL-321 3078 chr3R 29655630 29655672 chr3R 29655729 29655771 20 98 8.5 3.0 5.8 2.9 141 chr3R 29655630 intron Dop1R2 - chr3R 29655700 intron Dop1R2 - chr3R 29655771 intron Dop1R2 - chr3R_20_29655001 chr3R_29655001 RAL-321 3079 chr3R 29711309 29711328 chr3R 29711417 29711436 6 108 8.5 6.5 7.5 0.7 127 chr3R 29711309 intergenic not near genes chr3R 29711372 intergenic not near genes chr3R 29711436 intergenic not near genes chr3R_6_29710001 chr3R_29710001 RAL-321 3080 chr3R 29738246 29738296 chr3R 29739733 29739783 hobo 21 1487 4.5 8.5 6.5 2.8 1537 chr3R 29738246 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739783 5` UTR CG1969 + chr3R_21_29735001 chr3R_29735001 RAL-321 3081 chr3R 29790655 29790670 chr3R 29790737 29790749 4 84 4.0 8.0 6.0 0.6 94 chr3R 29790655 intron kay + chr3R 29790702 intron kay + chr3R 29790749 intron kay + chr3R_4_29790001 chr3R_29790001 RAL-321 3082 chr3R 29831789 29831839 chr3R 29831894 29831944 17 103 8.5 1.5 5.0 2.8 155 chr3R 29831789 exon Atg16 - chr3R 29831866 intron Atg16 - chr3R 29831944 exon Atg16 - chr3R_17_29830001 chr3R_29830001 RAL-321 3083 chr3R 29854813 29854840 chr3R 29854912 29854929 14 95 9.5 8.5 9.0 1.4 116 chr3R 29854813 3` UTR dgt1 - chr3R 29854871 exon dgt1 - chr3R 29854929 exon dgt1 - chr3R_14_29850001 chr3R_29850001 RAL-321 3084 chr3R 29854841 29854859 chr3R 29854908 29854959 9 96 4.0 7.0 5.5 1.4 118 chr3R 29854841 3` UTR dgt1 - chr3R 29854900 exon dgt1 - chr3R 29854959 exon dgt1 - chr3R_9_29850001 chr3R_29850001 RAL-321 3085 chr3R 29882003 29882016 chr3R 29891180 29891193 roo 10 9177 16.0 9.5 12.8 0.7 9190 chr3R 29882003 intron CG31038 + chr3R 29886598 intron CG31038 + chr3R 29891193 intron CG31038 + chr3R_10_29885001 chr3R_29885001 RAL-321 3086 chr3R 29882017 29882046 chr3R 29891178 29891223 roo 19 9175 7.5 8.5 8.0 2.1 9206 chr3R 29882017 intron CG31038 + chr3R 29886620 intron CG31038 + chr3R 29891223 intron CG31038 + chr3R_19_29885001 chr3R_29885001 RAL-321 3087 chr3R 29950555 29950595 chr3R 29950652 29950662 15 91 3.5 6.5 5.0 2.5 107 chr3R 29950555 intergenic TkR99D - chr3R 29950608 intergenic TkR99D - chr3R 29950662 intergenic TkR99D - chr3R_15_29950001 chr3R_29950001 RAL-321 3088 chr3R 29958291 29958314 chr3R 29958400 29958423 5 105 14.0 12.0 13.0 0.4 132 chr3R 29958291 intron TkR99D - chr3R 29958357 intron TkR99D - chr3R 29958423 intron TkR99D - chr3R_5_29955001 chr3R_29955001 RAL-321 3089 chr3R 29958317 29958340 chr3R 29958396 29958449 11 105 4.5 9.5 7.0 1.4 132 chr3R 29958317 intron TkR99D - chr3R 29958383 intron TkR99D - chr3R 29958449 intron TkR99D - chr3R_11_29955001 chr3R_29955001 RAL-321 3090 chr3R 29966054 29966070 chr3R 29966151 29966167 5 96 8.0 12.5 10.2 0.4 113 chr3R 29966054 intron TkR99D - chr3R 29966110 intron TkR99D - chr3R 29966167 intron TkR99D - chr3R_5_29965001 chr3R_29965001 RAL-321 3091 chr3R 30032143 30032183 chr3R 30032242 30032253 10 96 6.0 6.0 6.0 1.4 110 chr3R 30032143 intron Axn + chr3R 30032198 intron Axn + chr3R 30032253 intron Axn + chr3R_10_30030001 chr3R_30030001 RAL-321 3092 chr3R 30059380 30059421 chr3R 30059486 30059526 4 105 6.5 0.0 3.2 1.0 146 chr3R 30059380 intron sima + chr3R 30059453 intron sima + chr3R 30059526 intron sima + chr3R_4_30055001 chr3R_30055001 RAL-321 3093 chr3R 30083136 30083169 chr3R 30083267 30083300 6 131 0.5 4.5 2.5 1.7 164 chr3R 30083136 intron sima + chr3R 30083218 intron sima + chr3R 30083300 intron sima + chr3R_6_30080001 chr3R_30080001 RAL-321 3094 chr3R 30084867 30084878 chr3R 30086316 30086365 hobo 6 1476 0.0 2.5 1.2 2.7 1498 chr3R 30084867 intron sima + chr3R 30085616 intron sima + chr3R 30086365 intron sima + chr3R_6_30085001 chr3R_30085001 RAL-321 3095 chr3R 30106362 30106409 chr3R 30106501 30106517 8 122 0.0 9.0 4.5 1.5 155 chr3R 30106362 intron sima + chr3R 30106440 intron sima + chr3R 30106517 intron sima + chr3R_8_30105001 chr3R_30105001 RAL-321 3096 chr3R 30124940 30124971 chr3R 30125036 30125067 17 94 7.0 10.5 8.8 1.7 127 chr3R 30124940 intergenic CG45073 - chr3R 30125004 intergenic CG45073 - chr3R 30125067 intergenic CG45073 - chr3R_17_30125001 chr3R_30125001 RAL-321 3097 chr3R 30177723 30177771 chr3R 30177860 30177908 14 136 7.0 3.0 5.0 2.3 185 chr3R 30177723 intergenic CG1983 -,CG15530 + chr3R 30177816 intergenic CG15530 +,CG1983 - chr3R 30177908 5` UTR CG15530 + chr3R_14_30175001 chr3R_30175001 RAL-321 3098 chr3R 30181086 30181137 chr3R 30181183 30181228 10 88 5.5 10.0 7.8 1.1 142 chr3R 30181086 3` UTR Bet5 + chr3R 30181157 3` UTR Bet5 + chr3R 30181228 3` UTR Bet5 + chr3R_10_30180001 chr3R_30180001 RAL-321 3099 chr3R 30183202 30183234 chr3R 30183331 30183362 13 128 5.5 8.0 6.8 1.7 160 chr3R 30183202 intergenic not near genes chr3R 30183282 intergenic not near genes chr3R 30183362 intergenic CR44262 - chr3R_13_30180001 chr3R_30180001 RAL-321 3100 chr3R 30203375 30203384 chr3R 30203474 30203483 4 99 2.5 4.5 3.5 0.9 108 chr3R 30203375 intergenic CG9743 - chr3R 30203429 intergenic CG9743 - chr3R 30203483 intergenic CG9743 - chr3R_4_30200001 chr3R_30200001 RAL-321 3101 chr3R 30210662 30210674 chr3R 30210762 30210774 6 100 0.0 17.0 8.5 0.6 112 chr3R 30210662 intergenic CecA1 +,Anp + chr3R 30210718 intergenic CecA1 +,Anp + chr3R 30210774 intergenic CecA1 +,Anp + chr3R_6_30210001 chr3R_30210001 RAL-321 3102 chr3R 30219840 30219844 chr3R 30219949 30219953 4 109 7.5 0.5 4.0 0.8 113 chr3R 30219840 intergenic not near genes chr3R 30219896 intergenic not near genes chr3R 30219953 intergenic not near genes chr3R_4_30215001 chr3R_30215001 RAL-321 3103 chr3R 30238743 30238784 chr3R 30239927 30239969 1360 17 1184 7.5 0.5 4.0 3.4 1226 chr3R 30238743 intergenic not near genes chr3R 30239356 intergenic not near genes chr3R 30239969 intergenic not near genes chr3R_17_30235001 chr3R_30235001 RAL-321 3104 chr3R 30246311 30246336 chr3R 30246410 30246435 10 99 0.0 11.5 5.8 1.5 124 chr3R 30246311 intron CG9733 - chr3R 30246373 intron CG9733 - chr3R 30246435 intron CG9733 - chr3R_10_30245001 chr3R_30245001 RAL-321 3105 chr3R 30307117 30307151 chr3R 30307201 30307252 15 97 2.5 5.0 3.8 3.1 135 chr3R 30307117 intron hdc + chr3R 30307184 intron hdc + chr3R 30307252 intron hdc + chr3R_15_30305001 chr3R_30305001 RAL-321 3106 chr3R 30317303 30317356 chr3R 30324916 30324968 roo 8 7610 2.5 5.5 4.0 1.6 7665 chr3R 30317303 intron hdc + chr3R 30321136 intron hdc + chr3R 30324968 intron hdc + chr3R_8_30320001 chr3R_30320001 RAL-321 3107 chr3R 30332012 30332049 chr3R 30332111 30332148 12 96 7.5 7.5 7.5 1.4 136 chr3R 30332012 intron hdc + chr3R 30332080 intron hdc + chr3R 30332148 intron hdc + chr3R_12_30330001 chr3R_30330001 RAL-321 3108 chr3R 30347009 30347034 chr3R 30347113 30347138 8 103 8.5 8.0 8.2 0.9 129 chr3R 30347009 intron hdc + chr3R 30347074 intron hdc + chr3R 30347138 intron hdc + chr3R_8_30345001 chr3R_30345001 RAL-321 3109 chr3R 30375532 30375569 chr3R 30383175 30383211 412 12 7642 7.0 5.5 6.2 1.7 7679 chr3R 30375532 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383211 intergenic not near genes chr3R_12_30375001 chr3R_30375001 RAL-321 3110 chr3R 30396205 30396237 chr3R 30404491 30404523 roo 10 8285 4.5 8.0 6.2 1.4 8318 chr3R 30396205 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404523 5` UTR CR45570 + chr3R_10_30400001 chr3R_30400001 RAL-321 3111 chr3R 30413046 30413061 chr3R 30413143 30413158 7 97 10.5 6.0 8.2 0.8 112 chr3R 30413046 intergenic not near genes chr3R 30413102 intergenic not near genes chr3R 30413158 intergenic not near genes chr3R_7_30410001 chr3R_30410001 RAL-321 3112 chr3R 30413074 30413092 chr3R 30413139 30413189 12 90 3.0 5.5 4.2 2.3 115 chr3R 30413074 intergenic not near genes chr3R 30413132 intergenic not near genes chr3R 30413189 intergenic not near genes chr3R_12_30410001 chr3R_30410001 RAL-321 3113 chr3R 30445488 30445538 chr3R 30445600 30445650 27 112 8.5 5.5 7.0 3.4 162 chr3R 30445488 intergenic aralar1 -,Osi23 - chr3R 30445569 intergenic aralar1 - chr3R 30445650 3` UTR aralar1 - chr3R_27_30445001 chr3R_30445001 RAL-321 3114 chr3R 30448096 30448129 chr3R 30448189 30448227 11 98 6.0 0.0 3.0 2.8 131 chr3R 30448096 intron aralar1 - chr3R 30448162 intron aralar1 - chr3R 30448227 intron aralar1 - chr3R_11_30445001 chr3R_30445001 RAL-321 3115 chr3R 30456375 30456424 chr3R 30456475 30456524 23 99 5.0 8.5 6.8 2.9 149 chr3R 30456375 intergenic CG2224 - chr3R 30456450 3` UTR CG2224 - chr3R 30456524 3` UTR CG2224 - chr3R_23_30455001 chr3R_30455001 RAL-321 3116 chr3R 30458004 30458029 chr3R 30458104 30458129 11 100 10.5 11.0 10.8 0.9 125 chr3R 30458004 intron CG2224 - chr3R 30458066 intron CG2224 - chr3R 30458129 intron CG2224 - chr3R_11_30455001 chr3R_30455001 RAL-321 3117 chr3R 30458031 30458047 chr3R 30458100 30458147 10 96 9.0 9.0 9.0 1.0 116 chr3R 30458031 intron CG2224 - chr3R 30458089 intron CG2224 - chr3R 30458147 intron CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-321 3118 chr3R 30480470 30480484 chr3R 30482957 30482959 jockey 4 2484 14.5 12.5 13.5 0.3 2489 chr3R 30480470 intron PH4alphaEFB + chr3R 30481714 intron PH4alphaEFB + chr3R 30482959 intron PH4alphaEFB + chr3R_4_30480001 chr3R_30480001 RAL-321 3119 chr3R 30480487 30480503 chr3R 30482949 30482991 jockey 11 2485 7.0 11.5 9.2 1.1 2504 chr3R 30480487 intron PH4alphaEFB + chr3R 30481739 intron PH4alphaEFB + chr3R 30482991 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 RAL-321 3120 chr3R 30554379 30554425 chr3R 30554475 30554520 18 94 7.0 4.0 5.5 2.8 141 chr3R 30554379 intron tmod + chr3R 30554450 intron tmod + chr3R 30554520 intron tmod + chr3R_18_30550001 chr3R_30550001 RAL-321 3121 chr3R 30571681 30571715 chr3R 30571781 30571815 17 100 0.5 2.5 1.5 6.8 134 chr3R 30571681 intron tmod + chr3R 30571748 intron tmod + chr3R 30571815 exon tmod + chr3R_17_30570001 chr3R_30570001 RAL-321 3122 chr3R 30617184 30617200 chr3R 30617256 30617297 4 83 8.0 4.0 6.0 0.6 113 chr3R 30617184 intergenic not near genes chr3R 30617240 intergenic not near genes chr3R 30617297 intergenic not near genes chr3R_4_30615001 chr3R_30615001 RAL-321 3123 chr3R 30627588 30627639 chr3R 30627688 30627688 17 90 5.0 5.5 5.2 2.7 100 chr3R 30627588 3` UTR CG2267 - chr3R 30627638 exon CG2267 - chr3R 30627688 exon CG2267 - chr3R_17_30625001 chr3R_30625001 RAL-321 3124 chr3R 30677867 30677878 chr3R 30677995 30678006 6 128 3.5 6.0 4.8 1.0 139 chr3R 30677867 intergenic not near genes chr3R 30677936 intergenic not near genes chr3R 30678006 intergenic not near genes chr3R_6_30675001 chr3R_30675001 RAL-321 3125 chr3R 30679500 30679551 chr3R 30686989 30687040 blood 16 7487 4.5 7.0 5.8 2.4 7540 chr3R 30679500 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687040 intergenic not near genes chr3R_16_30680001 chr3R_30680001 RAL-321 3126 chr3R 30690140 30690192 chr3R 30690244 30690296 27 101 6.5 8.0 7.2 3.3 156 chr3R 30690140 intergenic not near genes chr3R 30690218 intergenic Spn100A + chr3R 30690296 intergenic Spn100A + chr3R_27_30690001 chr3R_30690001 RAL-321 3127 chr3R 30818792 30818829 chr3R 30820377 30820409 1360 24 1585 6.5 7.0 6.8 3.1 1617 chr3R 30818792 intron cindr + chr3R 30819600 intron cindr + chr3R 30820409 intron cindr + chr3R_24_30815001 chr3R_30815001 RAL-321 3128 chr3R 30845064 30845077 chr3R 30845162 30845175 5 98 11.0 0.0 5.5 0.8 111 chr3R 30845064 intergenic not near genes chr3R 30845120 intergenic not near genes chr3R 30845175 intergenic not near genes chr3R_5_30845001 chr3R_30845001 RAL-321 3129 chr3R 30850220 30850268 chr3R 30850332 30850380 20 112 5.5 8.0 6.8 2.6 160 chr3R 30850220 intergenic not near genes chr3R 30850300 intergenic not near genes chr3R 30850380 intergenic not near genes chr3R_20_30850001 chr3R_30850001 RAL-321 3130 chr3R 30948074 30948108 chr3R 30948279 30948319 12 209 2.0 10.5 6.2 1.7 245 chr3R 30948074 intergenic not near genes chr3R 30948196 intergenic not near genes chr3R 30948319 intergenic not near genes chr3R_12_30945001 chr3R_30945001 RAL-321 3131 chr3R 30950060 30950112 chr3R 30950202 30950254 25 135 3.5 4.5 4.0 5.0 194 chr3R 30950060 intergenic not near genes chr3R 30950157 intergenic not near genes chr3R 30950254 intergenic not near genes chr3R_25_30950001 chr3R_30950001 RAL-321 3132 chr3R 30973111 30973165 chr3R 30973292 30973346 23 181 4.0 4.5 4.2 4.4 235 chr3R 30973111 intron 5-HT7 - chr3R 30973228 intron 5-HT7 - chr3R 30973346 intron 5-HT7 - chr3R_23_30970001 chr3R_30970001 RAL-321 3133 chr3R 30982601 30982624 chr3R 30982687 30982696 4 96 8.0 2.5 5.2 0.6 95 chr3R 30982601 intron 5-HT7 - chr3R 30982648 intron 5-HT7 - chr3R 30982696 intron 5-HT7 - chr3R_4_30980001 chr3R_30980001 RAL-321 3134 chr3R 30996620 30996665 chr3R 30996864 30996909 22 243 7.5 4.5 6.0 3.1 289 chr3R 30996620 intron 5-HT7 - chr3R 30996764 intron 5-HT7 - chr3R 30996909 intron 5-HT7 - chr3R_22_30995001 chr3R_30995001 RAL-321 3135 chr3R 30996957 30997001 chr3R 30997069 30997113 15 112 7.0 7.5 7.2 1.8 156 chr3R 30996957 intron 5-HT7 - chr3R 30997035 intron 5-HT7 - chr3R 30997113 intron 5-HT7 - chr3R_15_30995001 chr3R_30995001 RAL-321 3136 chr3R 31024060 31024110 chr3R 31024166 31024208 16 106 4.5 5.0 4.8 2.8 148 chr3R 31024060 intergenic not near genes chr3R 31024134 intergenic not near genes chr3R 31024208 intergenic not near genes chr3R_16_31020001 chr3R_31020001 RAL-321 3137 chr3R 31042093 31042144 chr3R 31042200 31042251 21 106 6.5 7.0 6.8 2.7 158 chr3R 31042093 intron CanA1 + chr3R 31042172 intron CanA1 + chr3R 31042251 intron CanA1 + chr3R_21_31040001 chr3R_31040001 RAL-321 3138 chr3R 31074209 31074253 chr3R 31081829 31081873 springer 16 7620 6.0 5.5 5.8 2.4 7664 chr3R 31074209 intron Sox100B + chr3R 31078041 intron Sox100B + chr3R 31081873 intron Sox100B + chr3R_16_31075001 chr3R_31075001 RAL-321 3139 chr3R 31163240 31163258 chr3R 31163321 31163341 6 86 5.5 7.0 6.2 0.8 101 chr3R 31163240 intron,intron Gycbeta100B +,stops - chr3R 31163290 intron,intron Gycbeta100B +,stops - chr3R 31163341 intron,intron Gycbeta100B +,stops - chr3R_6_31160001 chr3R_31160001 RAL-321 3140 chr3R 31262855 31262885 chr3R 31262961 31263012 14 119 3.5 7.0 5.2 2.3 157 chr3R 31262855 exon CG18673 + chr3R 31262934 exon CG18673 + chr3R 31263012 exon CG18673 + chr3R_14_31260001 chr3R_31260001 RAL-321 3141 chr3R 31279361 31279409 chr3R 31285572 31285610 diver 12 6204 7.0 7.5 7.2 1.5 6249 chr3R 31279361 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285610 intergenic not near genes chr3R_12_31280001 chr3R_31280001 RAL-321 3142 chr3R 31413074 31413108 chr3R 31418289 31418327 copia 16 5219 7.5 1.0 4.2 3.1 5253 chr3R 31413074 intron Gprk2 + chr3R 31415700 intron Gprk2 + chr3R 31418327 intron Gprk2 + chr3R_16_31415001 chr3R_31415001 RAL-321 3143 chr3R 31426866 31426910 chr3R 31426971 31427016 22 110 6.0 6.5 6.2 3.1 150 chr3R 31426866 intron Gprk2 + chr3R 31426941 intron Gprk2 + chr3R 31427016 intron Gprk2 + chr3R_22_31425001 chr3R_31425001 RAL-321 3144 chr3R 31435346 31435388 chr3R 31435518 31435545 26 170 4.5 8.0 6.2 3.6 199 chr3R 31435346 intron Gprk2 + chr3R 31435446 intron Gprk2 + chr3R 31435545 intron Gprk2 + chr3R_26_31435001 chr3R_31435001 RAL-321 3145 chr3R 31464204 31464257 chr3R 31464401 31464412 22 190 3.0 8.5 5.8 3.2 208 chr3R 31464204 intergenic CG11333 + chr3R 31464308 intergenic CG11333 + chr3R 31464412 intergenic CG11333 + chr3R_22_31460001 chr3R_31460001 RAL-321 3146 chr3R 31476096 31476116 chr3R 31476211 31476231 15 115 1.5 10.0 5.8 2.2 135 chr3R 31476096 intergenic not near genes chr3R 31476164 intergenic not near genes chr3R 31476231 intergenic not near genes chr3R_15_31475001 chr3R_31475001 RAL-321 3147 chr3R 31522349 31522402 chr3R 31522478 31522533 21 124 4.0 7.5 5.8 3.1 184 chr3R 31522349 3` UTR CR45573 - chr3R 31522441 3` UTR CR45573 - chr3R 31522533 3` UTR CR45573 - chr3R_21_31520001 chr3R_31520001 RAL-321 3148 chr3R 31522779 31522793 chr3R 31522935 31522939 5 154 11.0 1.0 6.0 0.7 160 chr3R 31522779 3` UTR CR45573 - chr3R 31522859 3` UTR CR45573 - chr3R 31522939 3` UTR CR45573 - chr3R_5_31520001 chr3R_31520001 RAL-321 3149 chr3R 31528216 31528270 chr3R 31528437 31528491 12 219 3.5 5.5 4.5 2.2 275 chr3R 31528216 intergenic not near genes chr3R 31528354 intergenic not near genes chr3R 31528491 intergenic not near genes chr3R_12_31525001 chr3R_31525001 RAL-321 3150 chr3R 31589093 31589129 chr3R 31589191 31589241 16 107 2.5 7.0 4.8 2.8 148 chr3R 31589093 3` UTR,exon CR45190 -,CG1635 + chr3R 31589167 3` UTR,exon CR45190 -,CG1635 + chr3R 31589241 3` UTR,exon CR45190 -,CG1635 + chr3R_16_31585001 chr3R_31585001 RAL-321 3151 chr3R 31624442 31624476 chr3R 31624542 31624588 10 102 11.0 4.0 7.5 1.2 146 chr3R 31624442 intron kek6 + chr3R 31624515 intron kek6 + chr3R 31624588 intron kek6 + chr3R_10_31620001 chr3R_31620001 RAL-321 3152 chr3R 31630043 31630085 chr3R 31630168 31630210 21 125 5.0 2.0 3.5 4.7 167 chr3R 31630043 intron kek6 + chr3R 31630126 intron kek6 + chr3R 31630210 intron kek6 + chr3R_21_31630001 chr3R_31630001 RAL-321 3153 chr3R 31670587 31670631 chr3R 31670701 31670745 21 114 7.0 7.0 7.0 2.6 158 chr3R 31670587 intron CG1815 + chr3R 31670666 intron CG1815 + chr3R 31670745 intron CG1815 + chr3R_21_31670001 chr3R_31670001 RAL-321 3154 chr3R 31691515 31691560 chr3R 31696297 31696346 Doc 19 4785 5.0 4.5 4.8 3.3 4831 chr3R 31691515 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696346 intergenic not near genes chr3R_19_31690001 chr3R_31690001 RAL-321 3155 chr3R 31699714 31699743 chr3R 31699797 31699845 11 93 6.0 5.0 5.5 1.7 131 chr3R 31699714 intergenic not near genes chr3R 31699780 intergenic not near genes chr3R 31699845 intergenic not near genes chr3R_11_31695001 chr3R_31695001 RAL-321 3156 chr3R 31815851 31815901 chr3R 31815949 31816000 26 98 7.5 6.0 6.8 3.3 149 chr3R 31815851 intron RhoGAP100F + chr3R 31815926 intron RhoGAP100F + chr3R 31816000 intron RhoGAP100F + chr3R_26_31815001 chr3R_31815001 RAL-321 3157 chr3R 31831517 31831520 chr3R 31831616 31831619 4 99 12.5 7.5 10.0 0.4 102 chr3R 31831517 intron RhoGAP100F + chr3R 31831568 intron RhoGAP100F + chr3R 31831619 intron RhoGAP100F + chr3R_4_31830001 chr3R_31830001 RAL-321 3158 chr3R 31831523 31831570 chr3R 31831614 31831669 18 92 5.0 6.0 5.5 2.8 146 chr3R 31831523 intron RhoGAP100F + chr3R 31831596 intron RhoGAP100F + chr3R 31831669 intron RhoGAP100F + chr3R_18_31830001 chr3R_31830001 RAL-321 3159 chr3R 31858134 31858151 chr3R 31858274 31858287 12 140 9.0 7.0 8.0 1.3 153 chr3R 31858134 intron heph - chr3R 31858210 intron heph - chr3R 31858287 intron heph - chr3R_12_31855001 chr3R_31855001 RAL-321 3160 chr3R 31863303 31863323 chr3R 31863407 31863424 5 98 4.5 12.5 8.5 0.5 121 chr3R 31863303 intron heph - chr3R 31863364 intron heph - chr3R 31863424 intron heph - chr3R_5_31860001 chr3R_31860001 RAL-321 3161 chr3R 31865024 31865064 chr3R 31865122 31865175 9 105 0.0 3.5 1.8 3.2 151 chr3R 31865024 intron heph - chr3R 31865100 intron heph - chr3R 31865175 exon heph - chr3R_9_31865001 chr3R_31865001 RAL-321 3162 chr3R 31870633 31870687 chr3R 31870744 31870795 26 110 0.0 6.5 3.2 6.2 162 chr3R 31870633 intron heph - chr3R 31870714 intron heph - chr3R 31870795 intron heph - chr3R_26_31870001 chr3R_31870001 RAL-321 3163 chr3R 31883729 31883768 chr3R 31883845 31883899 18 129 4.5 7.0 5.8 2.6 170 chr3R 31883729 intron heph - chr3R 31883814 intron heph - chr3R 31883899 intron heph - chr3R_18_31880001 chr3R_31880001 RAL-321 3164 chr3R 31924557 31924579 chr3R 31924656 31924679 6 99 7.0 8.0 7.5 0.7 122 chr3R 31924557 intron heph - chr3R 31924618 intron heph - chr3R 31924679 intron heph - chr3R_6_31920001 chr3R_31920001 RAL-321 3165 chr3R 31925673 31925722 chr3R 31925763 31925818 20 94 6.0 7.0 6.5 2.7 145 chr3R 31925673 intron heph - chr3R 31925746 intron heph - chr3R 31925818 intron heph - chr3R_20_31925001 chr3R_31925001 RAL-321 3166 chr3R 31931178 31931214 chr3R 31931281 31931317 14 103 5.0 6.0 5.5 2.2 139 chr3R 31931178 intron heph - chr3R 31931248 intron heph - chr3R 31931317 intron heph - chr3R_14_31930001 chr3R_31930001 RAL-321 3167 chr3R 31949492 31949537 chr3R 31949598 31949627 14 104 5.0 3.5 4.2 2.7 135 chr3R 31949492 intron heph - chr3R 31949560 intron heph - chr3R 31949627 intron heph - chr3R_14_31945001 chr3R_31945001 RAL-321 3168 chr3R 31991085 31991136 chr3R 31991184 31991235 29 99 10.0 9.0 9.5 2.8 150 chr3R 31991085 intron heph - chr3R 31991160 intron heph - chr3R 31991235 intron heph - chr3R_29_31990001 chr3R_31990001 RAL-321 3169 chr3R 31997971 31998014 chr3R 32005461 32005504 blood 20 7489 6.5 10.5 8.5 2.1 7533 chr3R 31997971 intron heph - chr3R 32001738 intron heph - chr3R 32005504 intron heph - chr3R_20_32000001 chr3R_32000001 RAL-321 3170 chr3R 32022308 32022357 chr3R 32022430 32022479 19 119 4.0 10.5 7.2 2.3 171 chr3R 32022308 5` UTR CR45557 + chr3R 32022394 5` UTR CR45557 + chr3R 32022479 5` UTR CR45557 + chr3R_19_32020001 chr3R_32020001 RAL-321 3171 chr3R 32045554 32045600 chr3R 32045655 32045701 17 100 4.0 4.5 4.2 3.3 147 chr3R 32045554 3` UTR krz - chr3R 32045628 3` UTR krz - chr3R 32045701 3` UTR krz - chr3R_17_32045001 chr3R_32045001 RAL-321 3172 chr4 76478 76515 chr4 81941 81978 I-element 11 5461 5.0 7.5 6.2 1.5 5500 chr4 76478 intron pan + chr4 79228 intron pan + chr4 81978 intron pan + chr4_11_75001 chr4_75001 RAL-321 3173 chr4 319981 320020 chr4 328177 328216 Stalker2 19 8195 6.5 9.5 8.0 2.1 8235 chr4 319981 3` UTR CG32850 + chr4 324098 intron CG32850 + chr4 328216 3` UTR,3` UTR CG32850 +,PMCA - chr4_19_320001 chr4_320001 RAL-321 3174 chr4 671592 671630 chr4 680195 680233 Tirant 13 8601 7.5 12.5 10.0 1.2 8641 chr4 671592 intron CG11360 + chr4 675912 intron CG11360 + chr4 680233 intron CG11360 + chr4_13_675001 chr4_675001 RAL-321 3175 chr4 706632 706638 chr4 706845 706851 5 213 33.5 39.5 36.5 0.1 219 chr4 706632 intron ey + chr4 706742 intron ey + chr4 706851 intron ey + chr4_5_705001 chr4_705001 RAL-321 3176 chr4 798712 798718 chr4 798875 798911 4 184 5.5 11.5 8.5 0.4 199 chr4 798712 5` UTR CG11231 + chr4 798812 5` UTR CG11231 + chr4 798911 5` UTR CG11231 + chr4_4_795001 chr4_795001 RAL-321 3177 chr4 852099 852138 chr4 852271 852315 18 169 2.5 4.0 3.2 4.3 216 chr4 852099 intergenic CR45123 + chr4 852207 intergenic not near genes chr4 852315 intergenic not near genes chr4_18_850001 chr4_850001 RAL-321 3178 chr4 959604 959653 chr4 959801 959852 23 196 6.0 7.0 6.5 3.1 248 chr4 959604 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959852 5` UTR CR44030 + chr4_23_955001 chr4_955001 RAL-321 3179 chr4 972479 972527 chr4 972581 972629 13 102 6.0 5.5 5.8 1.9 150 chr4 972479 intron fuss - chr4 972554 intron fuss - chr4 972629 intron fuss - chr4_13_970001 chr4_970001 RAL-321 3180 chr4 1112072 1112114 chr4 1112169 1112211 14 96 4.0 6.0 5.0 2.3 139 chr4 1112072 3` UTR sv + chr4 1112142 3` UTR sv + chr4 1112211 3` UTR sv + chr4_14_1110001 chr4_1110001 RAL-321 3181 chrX 263664 263688 chrX 263766 263790 11 102 3.0 7.0 5.0 1.8 126 chrX 263664 intron,intron CG13377 -,CR43906 + chrX 263727 intron,intron CG13377 -,CR43906 + chrX 263790 intron,intron CG13377 -,CR43906 + chrX_11_260001 chrX_260001 RAL-321 3182 chrX 295838 295843 chrX 303478 303483 412 4 7640 14.5 5.5 10.0 0.4 7645 chrX 295838 intron CG3777 + chrX 299660 intron CG3777 + chrX 303483 intron CG3777 + chrX_4_295001 chrX_295001 RAL-321 3183 chrX 295848 295882 chrX 303477 303522 412 7 7638 5.0 5.5 5.2 1.1 7674 chrX 295848 intron CG3777 + chrX 299685 intron CG3777 + chrX 303522 intron CG3777 + chrX_7_295001 chrX_295001 RAL-321 3184 chrX 318450 318498 chrX 323556 323604 flea 15 5106 5.5 6.0 5.8 2.2 5154 chrX 318450 intron,intron CG3777 +,CG32816 - chrX 321027 intron,intron CG3777 +,CG32816 - chrX 323604 intron,intron CG3777 +,CG32816 - chrX_15_320001 chrX_320001 RAL-321 3185 chrX 428400 428451 chrX 434605 434656 3S18 22 6203 7.5 6.5 7.0 2.8 6256 chrX 428400 intron CG32816 - chrX 431528 intron CG32816 - chrX 434656 intron CG32816 - chrX_22_430001 chrX_430001 RAL-321 3186 chrX 520830 520855 chrX 520912 520964 10 102 3.5 3.5 3.5 2.2 134 chrX 520830 intron,intron elav -,arg + chrX 520897 intron,intron elav -,arg + chrX 520964 intron,intron elav -,arg + chrX_10_520001 chrX_520001 RAL-321 3187 chrX 533890 533922 chrX 534315 534347 12 422 4.0 4.0 4.0 2.4 457 chrX 533890 intron Appl + chrX 534118 intron Appl + chrX 534347 intron Appl + chrX_12_530001 chrX_530001 RAL-321 3188 chrX 551407 551439 chrX 558989 559014 412 8 7579 10.0 8.0 9.0 0.8 7607 chrX 551407 intron Appl + chrX 555210 intron Appl + chrX 559014 intron Appl + chrX_8_555001 chrX_555001 RAL-321 3189 chrX 551440 551449 chrX 558987 559031 412 5 7570 7.5 7.5 7.5 0.6 7591 chrX 551440 intron Appl + chrX 555236 intron Appl + chrX 559031 intron Appl + chrX_5_555001 chrX_555001 RAL-321 3190 chrX 667629 667679 chrX 667733 667783 19 103 5.5 5.5 5.5 2.9 154 chrX 667629 intergenic not near genes chrX 667706 intergenic not near genes chrX 667783 intergenic not near genes chrX_19_665001 chrX_665001 RAL-321 3191 chrX 670252 670261 chrX 670352 670361 5 100 0.0 2.0 1.0 2.5 109 chrX 670252 intergenic not near genes chrX 670306 intergenic not near genes chrX 670361 intergenic not near genes chrX_5_670001 chrX_670001 RAL-321 3192 chrX 670264 670294 chrX 670347 670388 10 95 0.0 2.0 1.0 5.0 124 chrX 670264 intergenic not near genes chrX 670326 intergenic not near genes chrX 670388 intergenic not near genes chrX_10_670001 chrX_670001 RAL-321 3193 chrX 680817 680868 chrX 680920 680941 21 96 6.0 3.5 4.8 3.6 124 chrX 680817 intergenic not near genes chrX 680879 intergenic not near genes chrX 680941 intergenic not near genes chrX_21_680001 chrX_680001 RAL-321 3194 chrX 706769 706824 chrX 707161 707208 13 385 0.0 6.0 3.0 3.2 439 chrX 706769 intron sdk + chrX 706988 intron sdk + chrX 707208 intron sdk + chrX_13_705001 chrX_705001 RAL-321 3195 chrX 736915 736940 chrX 737016 737041 12 99 7.0 7.5 7.2 1.5 126 chrX 736915 intron sdk + chrX 736978 intron sdk + chrX 737041 intron sdk + chrX_12_735001 chrX_735001 RAL-321 3196 chrX 778108 778160 chrX 778218 778270 20 106 3.5 0.5 2.0 6.7 162 chrX 778108 intron fz3 + chrX 778189 intron fz3 + chrX 778270 intron fz3 + chrX_20_775001 chrX_775001 RAL-321 3197 chrX 780583 780596 chrX 780679 780692 13 96 6.0 0.0 3.0 3.2 109 chrX 780583 intron fz3 + chrX 780638 intron fz3 + chrX 780692 intron fz3 + chrX_13_780001 chrX_780001 RAL-321 3198 chrX 812259 812295 chrX 817898 817944 297 10 5648 6.0 5.5 5.8 1.5 5685 chrX 812259 intron CG43867 - chrX 815102 intron CG43867 - chrX 817944 intron CG43867 - chrX_10_815001 chrX_815001 RAL-321 3199 chrX 827600 827631 chrX 835397 835437 roo 6 7804 5.0 2.0 3.5 1.3 7837 chrX 827600 intron CG43867 - chrX 831518 intron CG43867 - chrX 835437 intron CG43867 - chrX_6_830001 chrX_830001 RAL-321 3200 chrX 868474 868516 chrX 868571 868601 14 93 4.0 7.0 5.5 2.2 127 chrX 868474 intron CG43867 - chrX 868538 intron CG43867 - chrX 868601 intron CG43867 - chrX_14_865001 chrX_865001 RAL-321 3201 chrX 882219 882269 chrX 882326 882355 18 101 5.5 7.5 6.5 2.4 136 chrX 882219 intron CG43867 - chrX 882287 intron CG43867 - chrX 882355 intron CG43867 - chrX_18_880001 chrX_880001 RAL-321 3202 chrX 906691 906699 chrX 908500 908503 S-element 5 1808 7.5 14.5 11.0 0.4 1812 chrX 906691 intron CG43867 - chrX 907597 intron CG43867 - chrX 908503 intron CG43867 - chrX_5_905001 chrX_905001 RAL-321 3203 chrX 906701 906733 chrX 908493 908542 S-element 11 1807 3.0 14.5 8.8 1.1 1841 chrX 906701 intron CG43867 - chrX 907622 intron CG43867 - chrX 908542 intron CG43867 - chrX_11_905001 chrX_905001 RAL-321 3204 chrX 913001 913047 chrX 913108 913154 20 105 3.0 4.5 3.8 4.2 153 chrX 913001 intron CG43867 - chrX 913078 intron CG43867 - chrX 913154 intron CG43867 - chrX_20_910001 chrX_910001 RAL-321 3205 chrX 953218 953234 chrX 953381 953396 6 163 3.0 3.0 3.0 1.5 178 chrX 953218 intergenic not near genes chrX 953307 intergenic not near genes chrX 953396 intergenic not near genes chrX_6_950001 chrX_950001 RAL-321 3206 chrX 992517 992569 chrX 998442 998494 17 5923 5.0 8.5 6.8 2.2 5977 chrX 992517 intergenic not near genes chrX 995506 intergenic not near genes chrX 998494 intergenic not near genes chrX_17_995001 chrX_995001 RAL-321 3207 chrX 1053120 1053120 chrX 16983076 16983077 5 15929957 16.0 14.5 15.2 0.3 15929957 chrX 1053120 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-321 3208 chrX 1056932 1056975 chrX 1057029 1057072 17 96 2.5 5.0 3.8 3.5 140 chrX 1056932 intron CR44779 + chrX 1057002 intron CR44779 + chrX 1057072 intron CR44779 + chrX_17_1055001 chrX_1055001 RAL-321 3209 chrX 1063738 1063751 chrX 1072551 1072564 roo 4 8813 10.5 5.0 7.8 0.5 8826 chrX 1063738 intron CR44779 + chrX 1068151 intron CR44779 + chrX 1072564 intron CR44779 + chrX_4_1065001 chrX_1065001 RAL-321 3210 chrX 1253724 1253762 chrX 1253825 1253864 17 100 3.5 7.5 5.5 2.6 140 chrX 1253724 intron Atf3 - chrX 1253794 intron Atf3 - chrX 1253864 intron Atf3 - chrX_17_1250001 chrX_1250001 RAL-321 3211 chrX 1357760 1357808 chrX 1367950 1367984 Doc 19 10189 7.0 5.0 6.0 2.7 10224 chrX 1357760 intergenic png - chrX 1362872 intergenic not near genes chrX 1367984 intergenic not near genes chrX_19_1360001 chrX_1360001 RAL-321 3212 chrX 1518028 1518069 chrX 1523439 1523490 jockey 18 5419 4.0 6.0 5.0 3.0 5462 chrX 1518028 intergenic inc + chrX 1520759 intergenic not near genes chrX 1523490 intergenic not near genes chrX_18_1520001 chrX_1520001 RAL-321 3213 chrX 1560651 1560661 chrX 1560753 1560773 4 108 3.0 2.0 2.5 1.1 122 chrX 1560651 intron Mur2B - chrX 1560712 intron Mur2B - chrX 1560773 intron Mur2B - chrX_4_1560001 chrX_1560001 RAL-321 3214 chrX 1930516 1930566 chrX 1938107 1938157 opus 23 7591 9.5 4.5 7.0 2.9 7641 chrX 1930516 3` UTR CG11596 + chrX 1934336 intergenic not near genes chrX 1938157 3` UTR CG3857 - chrX_23_1930001 chrX_1930001 RAL-321 3215 chrX 1954895 1954919 chrX 1962830 1962868 Stalker2 8 7940 3.0 4.5 3.8 1.7 7973 chrX 1954895 intron Hr4 + chrX 1958882 intron Hr4 + chrX 1962868 intron Hr4 + chrX_8_1955001 chrX_1955001 RAL-321 3216 chrX 2023945 2023988 chrX 2024083 2024109 14 139 55.0 58.5 56.8 0.2 164 chrX 2023945 3` UTR,3` UTR east +,Actn - chrX 2024027 3` UTR,3` UTR east +,Actn - chrX 2024109 3` UTR,3` UTR east +,Actn - chrX_14_2020001 chrX_2020001 RAL-321 3217 chrX 2020865 2020872 chrX 2025573 2025611 17 4713 33.0 30.5 31.8 0.5 4746 chrX 2020865 exon east + chrX 2023238 3` UTR east + chrX 2025611 exon Actn - chrX_17_2020001 chrX_2020001 RAL-321 3218 chrX 2123894 2123909 chrX 2123992 2124007 7 97 12.5 5.0 8.8 0.7 113 chrX 2123894 intergenic not near genes chrX 2123950 intergenic not near genes chrX 2124007 intergenic not near genes chrX_7_2120001 chrX_2120001 RAL-321 3219 chrX 2123911 2123941 chrX 2123989 2124039 11 91 5.5 4.5 5.0 1.8 128 chrX 2123911 intergenic not near genes chrX 2123975 intergenic not near genes chrX 2124039 intergenic not near genes chrX_11_2120001 chrX_2120001 RAL-321 3220 chrX 2146635 2146687 chrX 2146747 2146799 22 111 7.5 7.0 7.2 2.7 164 chrX 2146635 intron Pgd + chrX 2146717 intron Pgd + chrX 2146799 intron Pgd + chrX_22_2145001 chrX_2145001 RAL-321 3221 chrX 2331392 2331430 chrX 2331501 2331539 14 109 5.5 8.0 6.8 1.8 147 chrX 2331392 intron phl + chrX 2331466 intron phl + chrX 2331539 intron,3` UTR phl +,Ilp6 - chrX_14_2330001 chrX_2330001 RAL-321 3222 chrX 2353506 2353547 chrX 2353611 2353650 16 104 3.5 6.5 5.0 2.7 144 chrX 2353506 intron ptr - chrX 2353578 intron ptr - chrX 2353650 intron ptr - chrX_16_2350001 chrX_2350001 RAL-321 3223 chrX 2399842 2399871 chrX 2408198 2408232 roo 6 8353 2.0 0.0 1.0 3.0 8390 chrX 2399842 intergenic not near genes chrX 2404037 intergenic not near genes chrX 2408232 intergenic not near genes chrX_6_2400001 chrX_2400001 RAL-321 3224 chrX 2429650 2429652 chrX 2429751 2429753 4 101 0.0 7.0 3.5 0.9 103 chrX 2429650 intergenic not near genes chrX 2429702 intergenic not near genes chrX 2429753 intergenic not near genes chrX_4_2425001 chrX_2425001 RAL-321 3225 chrX 2429653 2429662 chrX 2429739 2429763 7 99 0.0 5.5 2.8 1.8 110 chrX 2429653 intergenic not near genes chrX 2429708 intergenic not near genes chrX 2429763 intergenic not near genes chrX_7_2425001 chrX_2425001 RAL-321 3226 chrX 2432807 2432856 chrX 2433224 2433274 13 417 4.0 4.0 4.0 2.6 467 chrX 2432807 intergenic not near genes chrX 2433040 intergenic not near genes chrX 2433274 intergenic not near genes chrX_13_2430001 chrX_2430001 RAL-321 3227 chrX 2454452 2454493 chrX 2454552 2454601 10 100 4.0 0.0 2.0 3.3 149 chrX 2454452 intron boi - chrX 2454526 intron boi - chrX 2454601 intron boi - chrX_10_2450001 chrX_2450001 RAL-321 3228 chrX 2559342 2559389 chrX 2559450 2559497 22 107 5.5 7.0 6.2 3.1 155 chrX 2559342 intron Pdfr + chrX 2559420 intron Pdfr + chrX 2559497 intron Pdfr + chrX_22_2555001 chrX_2555001 RAL-321 3229 chrX 2571845 2571899 chrX 2572124 2572178 13 278 4.0 4.5 4.2 2.5 333 chrX 2571845 intron Pdfr + chrX 2572012 intron Pdfr + chrX 2572178 intron Pdfr + chrX_13_2570001 chrX_2570001 RAL-321 3230 chrX 2578801 2578845 chrX 2578913 2578957 18 111 5.5 5.0 5.2 2.9 156 chrX 2578801 intergenic Pdfr +,Vha36-3 - chrX 2578879 intergenic Vha36-3 -,Pdfr + chrX 2578957 intergenic Vha36-3 -,Pdfr + chrX_18_2575001 chrX_2575001 RAL-321 3231 chrX 2610368 2610378 chrX 2617505 2617515 HMS-Beagle 4 7137 6.0 3.0 4.5 0.7 7147 chrX 2610368 intergenic CG8636 - chrX 2613942 intergenic not near genes chrX 2617515 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-321 3232 chrX 2807341 2807391 chrX 2807456 2807506 13 115 6.0 2.0 4.0 2.6 165 chrX 2807341 intron kirre + chrX 2807424 intron kirre + chrX 2807506 intron kirre + chrX_13_2805001 chrX_2805001 RAL-321 3233 chrX 2844881 2844925 chrX 2852311 2852342 mdg1 11 7428 5.0 5.5 5.2 1.8 7461 chrX 2844881 intron kirre + chrX 2848612 intron kirre + chrX 2852342 intron kirre + chrX_11_2845001 chrX_2845001 RAL-321 3234 chrX 3058011 3058051 chrX 3058272 3058312 pogo 8 261 8.5 9.0 8.8 0.8 301 chrX 3058011 intron kirre + chrX 3058162 intron kirre + chrX 3058312 intron kirre + chrX_8_3055001 chrX_3055001 RAL-321 3235 chrX 3088541 3088574 chrX 3088677 3088713 9 138 1.5 5.5 3.5 2.0 172 chrX 3088541 intron kirre + chrX 3088627 intron kirre + chrX 3088713 intron kirre + chrX_9_3085001 chrX_3085001 RAL-321 3236 chrX 3111063 3111094 chrX 3111153 3111157 5 85 5.0 0.0 2.5 1.4 94 chrX 3111063 intron kirre + chrX 3111110 intron kirre + chrX 3111157 intron kirre + chrX_5_3110001 chrX_3110001 RAL-321 3237 chrX 3206487 3206505 chrX 3206586 3206604 9 98 0.0 8.0 4.0 1.8 117 chrX 3206487 intron dnc + chrX 3206546 intron dnc + chrX 3206604 intron dnc + chrX_9_3205001 chrX_3205001 RAL-321 3238 chrX 3218486 3218510 chrX 3227655 3227679 roo 11 9169 3.0 3.0 3.0 2.8 9193 chrX 3218486 intron dnc + chrX 3223082 intron dnc + chrX 3227679 intron dnc + chrX_11_3220001 chrX_3220001 RAL-321 3239 chrX 3228552 3228582 chrX 3228868 3228915 7 327 3.0 4.0 3.5 1.6 363 chrX 3228552 intron dnc + chrX 3228734 intron dnc + chrX 3228915 intron dnc + chrX_7_3225001 chrX_3225001 RAL-321 3240 chrX 3243615 3243657 chrX 3243725 3243767 19 110 9.0 4.5 6.8 2.4 152 chrX 3243615 intron dnc + chrX 3243691 intron dnc + chrX 3243767 intron dnc + chrX_19_3240001 chrX_3240001 RAL-321 3241 chrX 3306323 3306374 chrX 3306425 3306476 14 102 5.0 1.0 3.0 3.5 153 chrX 3306323 intron dnc + chrX 3306400 intron dnc + chrX 3306476 intron dnc + chrX_14_3305001 chrX_3305001 RAL-321 3242 chrX 3351805 3351814 chrX 3351896 3351910 7 99 4.0 12.5 8.2 0.8 105 chrX 3351805 intergenic not near genes chrX 3351858 intergenic not near genes chrX 3351910 intergenic not near genes chrX_7_3350001 chrX_3350001 RAL-321 3243 chrX 3354615 3354621 chrX 3355114 3355120 6 500 30.5 8.5 19.5 0.3 505 chrX 3354615 intergenic not near genes chrX 3354868 intergenic not near genes chrX 3355120 intergenic not near genes chrX_6_3350001 chrX_3350001 RAL-321 3244 chrX 3415004 3415047 chrX 3421209 3421252 3S18 8 6204 4.0 9.5 6.8 1.0 6248 chrX 3415004 intron,intron CR44999 +,CG12535 - chrX 3418128 intron,intron CR44999 +,CG12535 - chrX 3421252 intron,intron CR44999 +,CG12535 - chrX_8_3415001 chrX_3415001 RAL-321 3245 chrX 3422252 3422297 chrX 3422374 3422419 13 119 1.5 5.5 3.5 2.9 167 chrX 3422252 intron,intron CR44999 +,CG12535 - chrX 3422336 intron,intron CR44999 +,CG12535 - chrX 3422419 intron,intron CR44999 +,CG12535 - chrX_13_3420001 chrX_3420001 RAL-321 3246 chrX 3433416 3433433 chrX 3433513 3433532 7 99 6.0 5.5 5.8 1.0 116 chrX 3433416 intron,intron CR44999 +,CG12535 - chrX 3433474 intron,intron CR44999 +,CG12535 - chrX 3433532 intron,intron CR44999 +,CG12535 - chrX_7_3430001 chrX_3430001 RAL-321 3247 chrX 3476454 3476501 chrX 3476552 3476608 7 106 2.5 0.0 1.2 3.2 154 chrX 3476454 intron CR44999 + chrX 3476531 intron,3` UTR CR44999 +,CG10804 - chrX 3476608 intron,3` UTR CR44999 +,CG10804 - chrX_7_3475001 chrX_3475001 RAL-321 3248 chrX 3493075 3493114 chrX 3502254 3502293 roo 17 9178 8.0 5.0 6.5 2.3 9218 chrX 3493075 intron,intron CR44999 +,Gas8 - chrX 3497684 intron,intron CR44999 +,Gas8 - chrX 3502293 intron,intron CR44999 +,Gas8 - chrX_17_3495001 chrX_3495001 RAL-321 3249 chrX 3535382 3535411 chrX 3535494 3535522 9 109 8.5 4.0 6.2 1.2 140 chrX 3535382 intron CG32791 - chrX 3535452 intron CG32791 - chrX 3535522 intron CG32791 - chrX_9_3535001 chrX_3535001 RAL-321 3250 chrX 3553498 3553515 chrX 3553601 3553609 6 101 8.0 8.0 8.0 0.7 111 chrX 3553498 intron CG32791 - chrX 3553554 intron CG32791 - chrX 3553609 intron CG32791 - chrX_6_3550001 chrX_3550001 RAL-321 3251 chrX 3595021 3595044 chrX 3595099 3595141 14 93 1.0 5.0 3.0 3.5 120 chrX 3595021 intron AstA-R1 + chrX 3595081 intron AstA-R1 + chrX 3595141 intron AstA-R1 + chrX_14_3595001 chrX_3595001 RAL-321 3252 chrX 3597535 3597580 chrX 3619721 3619766 roo 21 22187 4.5 4.5 4.5 3.8 22231 chrX 3597535 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619766 intron AstA-R1 + chrX_21_3605001 chrX_3605001 RAL-321 3253 chrX 3657396 3657443 chrX 3657496 3657543 16 100 6.0 6.0 6.0 2.3 147 chrX 3657396 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657543 intron AstA-R1 + chrX_16_3655001 chrX_3655001 RAL-321 3254 chrX 3726759 3726784 chrX 3730155 3730182 NOF 12 3412 4.0 0.0 2.0 4.0 3423 chrX 3726759 intron tlk + chrX 3728470 intron tlk + chrX 3730182 intron tlk + chrX_12_3725001 chrX_3725001 RAL-321 3255 chrX 3752388 3752400 chrX 3764757 3764769 17.6 5 12369 22.5 25.0 23.8 0.2 12381 chrX 3752388 intron tlk + chrX 3758578 intron tlk + chrX 3764769 intron tlk + chrX_5_3755001 chrX_3755001 RAL-321 3256 chrX 3842300 3842353 chrX 3842561 3842614 pogo 23 261 4.5 5.5 5.0 3.8 314 chrX 3842300 intron ec + chrX 3842457 intron ec + chrX 3842614 intron ec + chrX_23_3840001 chrX_3840001 RAL-321 3257 chrX 3880462 3880487 chrX 3880568 3880593 4 106 4.5 10.5 7.5 0.5 131 chrX 3880462 intergenic VhaAC39-1 + chrX 3880528 intergenic VhaAC39-1 + chrX 3880593 intergenic VhaAC39-1 + chrX_4_3880001 chrX_3880001 RAL-321 3258 chrX 3881253 3881300 chrX 3881412 3881459 24 159 2.0 4.5 3.2 5.7 206 chrX 3881253 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881459 exon VhaAC39-1 + chrX_24_3880001 chrX_3880001 RAL-321 3259 chrX 3916140 3916154 chrX 3916230 3916262 5 104 1.5 7.5 4.5 0.9 122 chrX 3916140 intron CG42541 - chrX 3916201 intron CG42541 - chrX 3916262 intron CG42541 - chrX_5_3915001 chrX_3915001 RAL-321 3260 chrX 3919099 3919147 chrX 3919197 3919245 22 97 0.5 5.5 3.0 5.5 146 chrX 3919099 intron CG42541 - chrX 3919172 intron CG42541 - chrX 3919245 intron CG42541 - chrX_22_3915001 chrX_3915001 RAL-321 3261 chrX 3930025 3930075 chrX 3930126 3930176 18 101 4.0 6.5 5.2 2.9 151 chrX 3930025 5` UTR CG42541 - chrX 3930100 5` UTR CG42541 - chrX 3930176 5` UTR CG42541 - chrX_18_3930001 chrX_3930001 RAL-321 3262 chrX 3950778 3950830 chrX 3950876 3950930 23 100 5.0 2.0 3.5 5.1 152 chrX 3950778 intron Vap-33A + chrX 3950854 intron Vap-33A + chrX 3950930 intron Vap-33A + chrX_23_3950001 chrX_3950001 RAL-321 3263 chrX 3986845 3986891 chrX 3994498 3994544 412 17 7653 4.5 7.0 5.8 2.5 7699 chrX 3986845 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994544 intergenic not near genes chrX_17_3990001 chrX_3990001 RAL-321 3264 chrX 4047450 4047498 chrX 4047582 4047631 17 131 4.0 3.0 3.5 3.8 181 chrX 4047450 intergenic CR45482 - chrX 4047540 intergenic CR45482 - chrX 4047631 3` UTR CR45482 - chrX_17_4045001 chrX_4045001 RAL-321 3265 chrX 4048479 4048527 chrX 4048575 4048623 15 96 9.0 3.0 6.0 2.1 144 chrX 4048479 3` UTR CR45482 - chrX 4048551 3` UTR CR45482 - chrX 4048623 3` UTR CR45482 - chrX_15_4045001 chrX_4045001 RAL-321 3266 chrX 4101848 4101900 chrX 4101947 4101952 16 95 3.5 6.5 5.0 2.7 104 chrX 4101848 exon CG15375 + chrX 4101900 exon CG15375 + chrX 4101952 exon CG15375 + chrX_16_4100001 chrX_4100001 RAL-321 3267 chrX 4132645 4132702 chrX 4132833 4132874 14 187 7.0 7.0 7.0 1.8 229 chrX 4132645 3` UTR GlcAT-I + chrX 4132760 3` UTR GlcAT-I + chrX 4132874 intergenic Fas2 -,GlcAT-I + chrX_14_4130001 chrX_4130001 RAL-321 3268 chrX 4157879 4157902 chrX 4164934 4164957 297 9 7055 8.0 9.0 8.5 0.9 7078 chrX 4157879 intron Fas2 - chrX 4161418 intron Fas2 - chrX 4164957 intron Fas2 - chrX_9_4160001 chrX_4160001 RAL-321 3269 chrX 4157903 4157922 chrX 4164927 4164962 297 10 7048 7.5 7.0 7.2 1.2 7059 chrX 4157903 intron Fas2 - chrX 4161432 intron Fas2 - chrX 4164962 intron Fas2 - chrX_10_4160001 chrX_4160001 RAL-321 3270 chrX 4206214 4206240 chrX 4206348 4206374 10 133 3.5 4.0 3.8 2.1 160 chrX 4206214 intergenic Fas2 - chrX 4206294 intergenic Fas2 - chrX 4206374 intergenic Fas2 - chrX_10_4205001 chrX_4205001 RAL-321 3271 chrX 4216328 4216336 chrX 4216426 4216435 4 99 6.0 7.5 6.8 0.5 107 chrX 4216328 intergenic not near genes chrX 4216382 intergenic CG15571 - chrX 4216435 intergenic CG15571 - chrX_4_4215001 chrX_4215001 RAL-321 3272 chrX 4252927 4252978 chrX 4253035 4253082 19 107 6.5 7.5 7.0 2.4 155 chrX 4252927 intergenic CG15576 - chrX 4253004 intergenic CG15576 - chrX 4253082 intergenic CG15576 - chrX_19_4250001 chrX_4250001 RAL-321 3273 chrX 4310878 4310928 chrX 4311082 4311112 15 201 1.0 4.0 2.5 4.3 234 chrX 4310878 intergenic CG15579 - chrX 4310995 intergenic CG15579 - chrX 4311112 intergenic CG15579 - chrX_15_4310001 chrX_4310001 RAL-321 3274 chrX 4324376 4324389 chrX 4324473 4324486 6 97 6.0 3.5 4.8 1.0 110 chrX 4324376 intron norpA + chrX 4324431 intron norpA + chrX 4324486 intron norpA + chrX_6_4320001 chrX_4320001 RAL-321 3275 chrX 4324394 4324415 chrX 4324471 4324512 13 95 3.0 3.5 3.2 3.1 118 chrX 4324394 intron norpA + chrX 4324453 intron norpA + chrX 4324512 intron norpA + chrX_13_4320001 chrX_4320001 RAL-321 3276 chrX 4525734 4525771 chrX 4525846 4525883 13 112 2.5 3.5 3.0 3.2 149 chrX 4525734 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525883 intron CR32773 - chrX_13_4525001 chrX_4525001 RAL-321 3277 chrX 4574880 4574907 chrX 4574991 4575018 6 111 6.5 2.0 4.2 1.2 138 chrX 4574880 intron CR32773 - chrX 4574949 intron CR32773 - chrX 4575018 intron CR32773 - chrX_6_4570001 chrX_4570001 RAL-321 3278 chrX 4575594 4575643 chrX 4575703 4575752 16 109 5.5 7.5 6.5 2.1 158 chrX 4575594 intron CR32773 - chrX 4575673 intron CR32773 - chrX 4575752 intron CR32773 - chrX_16_4575001 chrX_4575001 RAL-321 3279 chrX 4613530 4613573 chrX 4613640 4613683 16 108 1.5 7.0 4.2 3.1 153 chrX 4613530 intergenic not near genes chrX 4613606 intergenic not near genes chrX 4613683 intergenic not near genes chrX_16_4610001 chrX_4610001 RAL-321 3280 chrX 4660806 4660820 chrX 4660925 4660939 6 119 11.0 0.0 5.5 0.9 133 chrX 4660806 intron CG3009 - chrX 4660872 intron CG3009 - chrX 4660939 intron CG3009 - chrX_6_4660001 chrX_4660001 RAL-321 3281 chrX 4700374 4700423 chrX 4700737 4700781 jockey 16 361 4.5 7.5 6.0 2.3 407 chrX 4700374 3` UTR ctp + chrX 4700578 3` UTR ctp + chrX 4700781 3` UTR ctp + chrX_16_4700001 chrX_4700001 RAL-321 3282 chrX 4717332 4717387 chrX 4717873 4717928 16 536 4.0 4.5 4.2 3.1 596 chrX 4717332 intron Proc-R + chrX 4717630 intron Proc-R + chrX 4717928 intron Proc-R + chrX_16_4715001 chrX_4715001 RAL-321 3283 chrX 4731796 4731825 chrX 4736909 4736920 jockey 6 5108 6.0 4.0 5.0 1.0 5124 chrX 4731796 intergenic not near genes chrX 4734358 intergenic not near genes chrX 4736920 intergenic not near genes chrX_6_4730001 chrX_4730001 RAL-321 3284 chrX 4755387 4755435 chrX 4755484 4755532 10 95 0.0 2.0 1.0 5.0 145 chrX 4755387 intergenic not near genes chrX 4755460 intergenic not near genes chrX 4755532 intergenic not near genes chrX_10_4755001 chrX_4755001 RAL-321 3285 chrX 4763234 4763283 chrX 4763742 4763791 Stalker4 20 506 7.0 5.0 6.0 2.9 557 chrX 4763234 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763791 intergenic not near genes chrX_20_4760001 chrX_4760001 RAL-321 3286 chrX 4792365 4792403 chrX 4792818 4792856 jockey 10 453 5.5 8.0 6.8 1.3 491 chrX 4792365 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792856 intergenic not near genes chrX_10_4790001 chrX_4790001 RAL-321 3287 chrX 4815023 4815035 chrX 4815148 4815160 15 125 0.0 13.5 6.8 1.9 137 chrX 4815023 intergenic not near genes chrX 4815092 intergenic not near genes chrX 4815160 intergenic not near genes chrX_15_4815001 chrX_4815001 RAL-321 3288 chrX 4827953 4827964 chrX 4835344 4835355 Stalker4 4 7391 7.5 3.0 5.2 0.6 7402 chrX 4827953 intergenic not near genes chrX 4831654 intergenic not near genes chrX 4835355 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-321 3289 chrX 4827965 4827986 chrX 4835343 4835366 Stalker4 4 7385 5.5 3.0 4.2 0.8 7401 chrX 4827965 intergenic not near genes chrX 4831666 intergenic not near genes chrX 4835366 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-321 3290 chrX 4827987 4827998 chrX 4835342 4835389 Stalker4 7 7375 2.5 3.0 2.8 1.8 7402 chrX 4827987 intergenic not near genes chrX 4831688 intergenic not near genes chrX 4835389 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-321 3291 chrX 4871187 4871230 chrX 4871307 4871350 17 118 1.0 1.0 1.0 8.5 163 chrX 4871187 intron CG42594 + chrX 4871268 intron CG42594 + chrX 4871350 intron CG42594 + chrX_17_4870001 chrX_4870001 RAL-321 3292 chrX 4899594 4899619 chrX 4899690 4899714 5 96 2.5 0.0 1.2 2.3 120 chrX 4899594 intron CG42594 + chrX 4899654 intron CG42594 + chrX 4899714 intron CG42594 + chrX_5_4895001 chrX_4895001 RAL-321 3293 chrX 4987524 4987578 chrX 4987625 4987629 21 96 2.5 3.0 2.8 5.5 105 chrX 4987524 intron CR44833 - chrX 4987576 intron CR44833 - chrX 4987629 intron CR44833 - chrX_21_4985001 chrX_4985001 RAL-321 3294 chrX 4988882 4988923 chrX 4989000 4989041 10 115 3.5 7.5 5.5 1.5 159 chrX 4988882 intron CR44833 - chrX 4988962 intron CR44833 - chrX 4989041 intron CR44833 - chrX_10_4985001 chrX_4985001 RAL-321 3295 chrX 4990021 4990075 chrX 4997255 4997309 roo 18 7234 4.5 4.0 4.2 3.5 7288 chrX 4990021 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997309 intron CR44833 - chrX_18_4990001 chrX_4990001 RAL-321 3296 chrX 5096256 5096303 chrX 5103841 5103888 springer 22 7585 4.0 4.0 4.0 4.4 7632 chrX 5096256 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103888 intron,intron CG15465 +,rg + chrX_22_5100001 chrX_5100001 RAL-321 3297 chrX 5120642 5120662 chrX 5120770 5120798 4 127 0.0 0.5 0.2 3.3 156 chrX 5120642 intron,intron CG15465 +,rg + chrX 5120720 intron,intron CG15465 +,rg + chrX 5120798 intron,intron CG15465 +,rg + chrX_4_5120001 chrX_5120001 RAL-321 3298 chrX 5291489 5291500 chrX 5291595 5291601 6 104 11.0 3.5 7.2 0.7 112 chrX 5291489 intergenic not near genes chrX 5291545 intergenic not near genes chrX 5291601 intergenic not near genes chrX_6_5290001 chrX_5290001 RAL-321 3299 chrX 5337968 5338016 chrX 5338096 5338143 14 126 4.5 5.0 4.8 2.4 175 chrX 5337968 intergenic not near genes chrX 5338056 intergenic not near genes chrX 5338143 intergenic not near genes chrX_14_5335001 chrX_5335001 RAL-321 3300 chrX 5338687 5338736 chrX 5339960 5339973 jockey 10 1264 3.5 6.0 4.8 1.7 1286 chrX 5338687 intergenic not near genes chrX 5339330 intergenic not near genes chrX 5339973 intergenic SK + chrX_10_5335001 chrX_5335001 RAL-321 3301 chrX 5345375 5345423 chrX 5345506 5345554 14 129 2.5 6.5 4.5 2.5 179 chrX 5345375 intron SK + chrX 5345464 intron SK + chrX 5345554 intron SK + chrX_14_5345001 chrX_5345001 RAL-321 3302 chrX 5349262 5349309 chrX 5349359 5349406 12 97 3.5 4.0 3.8 2.5 144 chrX 5349262 intron SK + chrX 5349334 intron SK + chrX 5349406 intron SK + chrX_12_5345001 chrX_5345001 RAL-321 3303 chrX 5350282 5350315 chrX 5350411 5350444 12 126 5.5 7.0 6.2 1.7 162 chrX 5350282 intron SK + chrX 5350363 intron SK + chrX 5350444 intron SK + chrX_12_5350001 chrX_5350001 RAL-321 3304 chrX 5441965 5442019 chrX 5442093 5442147 14 123 4.0 4.5 4.2 2.7 182 chrX 5441965 intergenic not near genes chrX 5442056 intergenic not near genes chrX 5442147 intergenic not near genes chrX_14_5440001 chrX_5440001 RAL-321 3305 chrX 5469592 5469637 chrX 5469781 5469826 20 187 6.0 6.0 6.0 2.9 234 chrX 5469592 intron SPR + chrX 5469709 intron SPR + chrX 5469826 intron SPR + chrX_20_5465001 chrX_5465001 RAL-321 3306 chrX 5473567 5473609 chrX 5473663 5473705 13 94 6.0 6.5 6.2 1.8 138 chrX 5473567 intron SPR + chrX 5473636 intron SPR + chrX 5473705 intron SPR + chrX_13_5470001 chrX_5470001 RAL-321 3307 chrX 5478362 5478412 chrX 5478470 5478520 23 107 3.5 5.0 4.2 4.4 158 chrX 5478362 intron SPR + chrX 5478441 intron SPR + chrX 5478520 intron SPR + chrX_23_5475001 chrX_5475001 RAL-321 3308 chrX 5512032 5512081 chrX 5512135 5512188 7 104 2.0 0.0 1.0 3.5 156 chrX 5512032 intergenic not near genes chrX 5512110 intergenic not near genes chrX 5512188 intergenic not near genes chrX_7_5510001 chrX_5510001 RAL-321 3309 chrX 5727403 5727414 chrX 5732162 5732173 Doc 6 4759 8.5 5.0 6.8 0.8 4770 chrX 5727403 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732173 intron CG32758 - chrX_6_5725001 chrX_5725001 RAL-321 3310 chrX 5786554 5786605 chrX 5786657 5786708 16 102 5.0 1.5 3.2 3.8 154 chrX 5786554 intron CG42699 + chrX 5786631 intron CG42699 + chrX 5786708 intron CG42699 + chrX_16_5785001 chrX_5785001 RAL-321 3311 chrX 5883801 5883841 chrX 5884062 5884102 pogo 17 260 4.0 6.5 5.2 2.7 301 chrX 5883801 intron CR45668 - chrX 5883952 intron CR45668 - chrX 5884102 intron CR45668 - chrX_17_5880001 chrX_5880001 RAL-321 3312 chrX 5884143 5884191 chrX 5884404 5884452 pogo 25 260 3.0 4.0 3.5 5.6 309 chrX 5884143 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884452 intron CR45668 - chrX_25_5880001 chrX_5880001 RAL-321 3313 chrX 6003271 6003312 chrX 6003372 6003413 22 101 0.0 4.0 2.0 7.3 142 chrX 6003271 intron CR44498 + chrX 6003342 intron CR44498 + chrX 6003413 intron CR44498 + chrX_22_6000001 chrX_6000001 RAL-321 3314 chrX 6080811 6080828 chrX 6080915 6080932 11 104 11.5 2.5 7.0 1.4 121 chrX 6080811 intron CG4660 - chrX 6080872 intron CG4660 - chrX 6080932 intron CG4660 - chrX_11_6080001 chrX_6080001 RAL-321 3315 chrX 6118680 6118733 chrX 6118782 6118835 20 100 4.5 7.0 5.8 2.9 155 chrX 6118680 intron Ca-alpha1T - chrX 6118758 intron Ca-alpha1T - chrX 6118835 intron Ca-alpha1T - chrX_20_6115001 chrX_6115001 RAL-321 3316 chrX 6171568 6171615 chrX 6179021 6179068 Quasimodo 21 7453 3.5 5.0 4.2 4.0 7500 chrX 6171568 intron Ca-alpha1T - chrX 6175318 intron Ca-alpha1T - chrX 6179068 intron Ca-alpha1T - chrX_21_6175001 chrX_6175001 RAL-321 3317 chrX 6215512 6215531 chrX 6215613 6215632 6 101 8.5 9.5 9.0 0.6 120 chrX 6215512 intergenic not near genes chrX 6215572 intergenic not near genes chrX 6215632 intergenic not near genes chrX_6_6215001 chrX_6215001 RAL-321 3318 chrX 6306534 6306580 chrX 6306631 6306667 16 88 4.0 3.5 3.8 3.3 133 chrX 6306534 3` UTR CG3823 + chrX 6306600 3` UTR CG3823 + chrX 6306667 3` UTR CG3823 + chrX_16_6305001 chrX_6305001 RAL-321 3319 chrX 6335225 6335244 chrX 6337745 6337774 Tirant 11 2529 0.5 6.5 3.5 2.4 2549 chrX 6335225 intergenic not near genes chrX 6336500 intergenic not near genes chrX 6337774 5` UTR CG3842 + chrX_11_6335001 chrX_6335001 RAL-321 3320 chrX 6392873 6392901 chrX 6397632 6397640 Doc 14 4779 5.0 5.5 5.2 2.3 4767 chrX 6392873 intergenic not near genes chrX 6395256 intergenic not near genes chrX 6397640 intergenic not near genes chrX_14_6395001 chrX_6395001 RAL-321 3321 chrX 6428515 6428562 chrX 6428757 6428812 21 248 1.5 5.0 3.2 5.0 297 chrX 6428515 intron CG42340 - chrX 6428664 intron CG42340 - chrX 6428812 intron CG42340 - chrX_21_6425001 chrX_6425001 RAL-321 3322 chrX 6445325 6445334 chrX 6451103 6451112 297 5 5778 1.5 9.5 5.5 0.8 5787 chrX 6445325 intron CG42340 - chrX 6448218 intron CG42340 - chrX 6451112 intron CG42340 - chrX_5_6445001 chrX_6445001 RAL-321 3323 chrX 6470604 6470651 chrX 6470797 6470809 7 188 3.0 0.5 1.8 2.5 205 chrX 6470604 intron CG42340 - chrX 6470706 intron CG42340 - chrX 6470809 intron CG42340 - chrX_7_6470001 chrX_6470001 RAL-321 3324 chrX 6562809 6562842 chrX 6571311 6571334 Tirant 9 8500 8.0 8.0 8.0 1.0 8525 chrX 6562809 intron CG34417 + chrX 6567072 intron CG34417 + chrX 6571334 intron CG34417 + chrX_9_6565001 chrX_6565001 RAL-321 3325 chrX 6591835 6591873 chrX 6591940 6591978 15 105 4.0 0.0 2.0 5.0 143 chrX 6591835 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591978 intron Pat1 + chrX_15_6590001 chrX_6590001 RAL-321 3326 chrX 6605472 6605499 chrX 6608515 6608542 Burdock 4 3043 3.0 2.5 2.8 1.1 3070 chrX 6605472 intron pigs + chrX 6607007 intron pigs + chrX 6608542 intron pigs + chrX_4_6605001 chrX_6605001 RAL-321 3327 chrX 6618449 6618468 chrX 6618547 6618566 7 98 8.0 9.0 8.5 0.7 117 chrX 6618449 intron pigs + chrX 6618508 intron pigs + chrX 6618566 intron pigs + chrX_7_6615001 chrX_6615001 RAL-321 3328 chrX 6674200 6674218 chrX 6674296 6674314 8 96 3.5 4.0 3.8 1.7 114 chrX 6674200 intergenic Mcm6 +,CG3198 - chrX 6674257 intergenic Mcm6 +,CG3198 - chrX 6674314 intergenic Mcm6 +,CG3198 - chrX_8_6670001 chrX_6670001 RAL-321 3329 chrX 6733427 6733439 chrX 6733531 6733538 5 104 7.5 9.5 8.5 0.5 111 chrX 6733427 intron,intron CG3168 -,CR43461 + chrX 6733482 intron,intron CG3168 -,CR43461 + chrX 6733538 intron,intron CG3168 -,CR43461 + chrX_5_6730001 chrX_6730001 RAL-321 3330 chrX 6733441 6733455 chrX 6733530 6733533 7 102 5.5 9.5 7.5 0.8 92 chrX 6733441 intron,intron CG3168 -,CR43461 + chrX 6733487 intron,intron CG3168 -,CR43461 + chrX 6733533 intron,intron CG3168 -,CR43461 + chrX_7_6730001 chrX_6730001 RAL-321 3331 chrX 6737502 6737521 chrX 6737604 6737605 11 100 12.0 4.5 8.2 1.2 103 chrX 6737502 intron CG3168 - chrX 6737554 intron CG3168 - chrX 6737605 intron CG3168 - chrX_11_6735001 chrX_6735001 RAL-321 3332 chrX 6737524 6737551 chrX 6737600 6737638 6 95 4.5 3.0 3.8 1.2 114 chrX 6737524 intron CG3168 - chrX 6737581 intron CG3168 - chrX 6737638 intron CG3168 - chrX_6_6735001 chrX_6735001 RAL-321 3333 chrX 6751476 6751526 chrX 6751584 6751639 17 112 1.0 6.0 3.5 3.8 163 chrX 6751476 intron CG14439 + chrX 6751558 intron CG14439 + chrX 6751639 intron CG14439 + chrX_17_6750001 chrX_6750001 RAL-321 3334 chrX 6752930 6752966 chrX 6753028 6753074 6 106 6.0 1.0 3.5 1.3 144 chrX 6752930 intron CG14439 + chrX 6753002 intron CG14439 + chrX 6753074 intron CG14439 + chrX_6_6750001 chrX_6750001 RAL-321 3335 chrX 6792066 6792092 chrX 6792172 6792198 6 106 4.0 4.5 4.2 1.2 132 chrX 6792066 intron C3G - chrX 6792132 intron C3G - chrX 6792198 intron C3G - chrX_6_6790001 chrX_6790001 RAL-321 3336 chrX 6859542 6859561 chrX 6859975 6859994 7 430 9.0 2.5 5.8 1.0 452 chrX 6859542 intron CG14434 - chrX 6859768 intron CG14434 - chrX 6859994 intron CG14434 - chrX_7_6855001 chrX_6855001 RAL-321 3337 chrX 6897565 6897701 chrX 6897663 6897831 27 118 0.5 1.0 0.8 15.0 266 chrX 6897565 intergenic not near genes chrX 6897698 intergenic not near genes chrX 6897831 intergenic not near genes chrX_27_6895001 chrX_6895001 RAL-321 3338 chrX 6901367 6901386 chrX 6901463 6901482 4 96 6.0 11.5 8.8 0.4 115 chrX 6901367 intergenic not near genes chrX 6901424 intergenic not near genes chrX 6901482 intergenic not near genes chrX_4_6900001 chrX_6900001 RAL-321 3339 chrX 6906076 6906100 chrX 6906173 6906197 10 97 8.5 6.0 7.2 1.2 121 chrX 6906076 intergenic not near genes chrX 6906136 intergenic not near genes chrX 6906197 intergenic not near genes chrX_10_6905001 chrX_6905001 RAL-321 3340 chrX 6988512 6988525 chrX 6988617 6988630 10 104 12.5 7.0 9.8 0.9 118 chrX 6988512 intron ogre - chrX 6988571 intron ogre - chrX 6988630 intron ogre - chrX_10_6985001 chrX_6985001 RAL-321 3341 chrX 6989485 6989534 chrX 6989592 6989636 19 106 3.5 7.5 5.5 2.9 151 chrX 6989485 intron ogre - chrX 6989560 intron ogre - chrX 6989636 intron ogre - chrX_19_6985001 chrX_6985001 RAL-321 3342 chrX 7023585 7023598 chrX 7030995 7031008 Tabor 6 7410 13.5 3.5 8.5 0.6 7423 chrX 7023585 intron CG12541 - chrX 7027296 intron CG12541 - chrX 7031008 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-321 3343 chrX 7023599 7023633 chrX 7030989 7031013 Tabor 15 7403 6.0 2.5 4.2 2.9 7414 chrX 7023599 intron CG12541 - chrX 7027306 intron CG12541 - chrX 7031013 intron CG12541 - chrX_15_7025001 chrX_7025001 RAL-321 3344 chrX 7120546 7120571 chrX 7120712 7120738 5 167 5.0 4.0 4.5 0.9 192 chrX 7120546 3` UTR CR45532 - chrX 7120642 3` UTR CR45532 - chrX 7120738 3` UTR CR45532 - chrX_5_7120001 chrX_7120001 RAL-321 3345 chrX 7125226 7125273 chrX 7134405 7134452 roo 20 9177 0.5 4.5 2.5 5.7 9226 chrX 7125226 intergenic not near genes chrX 7129839 intergenic not near genes chrX 7134452 intergenic not near genes chrX_20_7125001 chrX_7125001 RAL-321 3346 chrX 7156971 7157015 chrX 7157081 7157110 13 107 3.5 7.0 5.2 2.1 139 chrX 7156971 intron CG9650 + chrX 7157040 intron CG9650 + chrX 7157110 intron CG9650 + chrX_13_7155001 chrX_7155001 RAL-321 3347 chrX 7235538 7235542 chrX 7235645 7235649 4 107 6.5 7.0 6.8 0.5 111 chrX 7235538 intron,intron CG9650 +,CR44357 - chrX 7235594 intron,intron CG9650 +,CR44357 - chrX 7235649 intron,intron CG9650 +,CR44357 - chrX_4_7235001 chrX_7235001 RAL-321 3348 chrX 7345189 7345214 chrX 7345291 7345325 12 110 3.0 4.0 3.5 2.7 136 chrX 7345189 intron,intron CR44357 -,CG1677 - chrX 7345257 intron,intron CR44357 -,CG1677 - chrX 7345325 intron,intron CR44357 -,CG1677 - chrX_12_7345001 chrX_7345001 RAL-321 3349 chrX 7458212 7458261 chrX 7458348 7458353 10 131 3.5 0.5 2.0 3.3 141 chrX 7458212 intergenic not near genes chrX 7458282 intergenic not near genes chrX 7458353 intergenic not near genes chrX_10_7455001 chrX_7455001 RAL-321 3350 chrX 7702511 7702524 chrX 7702601 7702611 5 100 0.0 9.0 4.5 0.9 100 chrX 7702511 intron CHES-1-like - chrX 7702561 intron CHES-1-like - chrX 7702611 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-321 3351 chrX 7702886 7702927 chrX 7703345 7703386 jockey 18 459 5.0 7.5 6.2 2.5 500 chrX 7702886 intron CHES-1-like - chrX 7703136 intron CHES-1-like - chrX 7703386 intron CHES-1-like - chrX_18_7700001 chrX_7700001 RAL-321 3352 chrX 7720534 7720583 chrX 7720636 7720685 5 101 4.5 5.0 4.8 0.9 151 chrX 7720534 intergenic not near genes chrX 7720610 intergenic not near genes chrX 7720685 intergenic not near genes chrX_5_7720001 chrX_7720001 RAL-321 3353 chrX 7737110 7737129 chrX 7737242 7737246 7 129 9.5 6.0 7.8 0.8 136 chrX 7737110 5` UTR Tom40 + chrX 7737178 intron Tom40 + chrX 7737246 intron Tom40 + chrX_7_7735001 chrX_7735001 RAL-321 3354 chrX 7832417 7832464 chrX 7832526 7832573 19 107 4.0 6.0 5.0 3.2 156 chrX 7832417 intron CG1402 + chrX 7832495 intron CG1402 + chrX 7832573 intron CG1402 + chrX_19_7830001 chrX_7830001 RAL-321 3355 chrX 7845703 7845756 chrX 7847214 7847268 hopper2 17 1511 7.0 10.5 8.8 1.7 1565 chrX 7845703 intergenic not near genes chrX 7846486 intergenic not near genes chrX 7847268 intergenic not near genes chrX_17_7845001 chrX_7845001 RAL-321 3356 chrX 7881833 7881880 chrX 7881937 7881972 8 101 2.5 6.5 4.5 1.5 139 chrX 7881833 intergenic Ir7f -,Ir7e - chrX 7881902 intergenic Ir7f -,Ir7e - chrX 7881972 3` UTR Ir7f - chrX_8_7880001 chrX_7880001 RAL-321 3357 chrX 8031406 8031452 chrX 8035735 8035781 Juan 14 4329 3.5 3.5 3.5 3.1 4375 chrX 8031406 intergenic not near genes chrX 8033594 intergenic not near genes chrX 8035781 3` UTR CG2233 - chrX_14_8030001 chrX_8030001 RAL-321 3358 chrX 8085553 8085600 chrX 8085659 8085706 16 106 1.5 6.5 4.0 3.2 153 chrX 8085553 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085706 intron,5` UTR CG2256 -,CR45535 + chrX_16_8085001 chrX_8085001 RAL-321 3359 chrX 8092272 8092317 chrX 8092377 8092422 20 104 4.5 5.0 4.8 3.4 150 chrX 8092272 intron Ubc-E2H - chrX 8092347 intron Ubc-E2H - chrX 8092422 intron Ubc-E2H - chrX_20_8090001 chrX_8090001 RAL-321 3360 chrX 8211212 8211240 chrX 8211309 8211337 8 94 7.0 3.5 5.2 1.3 125 chrX 8211212 intron sdt + chrX 8211274 intron sdt + chrX 8211337 intron sdt + chrX_8_8210001 chrX_8210001 RAL-321 3361 chrX 8370725 8370727 chrX 10710702 10710703 4 2339977 10.5 18.0 14.2 0.3 2339978 chrX 8370725 intergenic not near genes chrX 9540714 intron CG32700 - chrX 10710703 intergenic X11Lbeta +,CG32676 - chrX_4_9540001 chrX_9540001 RAL-321 3362 chrX 8500911 8500952 chrX 8501095 8501130 15 184 5.5 0.0 2.8 3.9 219 chrX 8500911 intron CG33181 + chrX 8501020 intron CG33181 + chrX 8501130 intron CG33181 + chrX_15_8500001 chrX_8500001 RAL-321 3363 chrX 8506009 8506059 chrX 8506107 8506157 17 97 7.5 6.0 6.8 2.2 148 chrX 8506009 intron CG33181 + chrX 8506083 intron CG33181 + chrX 8506157 intron CG33181 + chrX_17_8505001 chrX_8505001 RAL-321 3364 chrX 8506508 8506557 chrX 8506736 8506785 18 223 3.5 3.5 3.5 4.0 277 chrX 8506508 intron CG33181 + chrX 8506646 intron CG33181 + chrX 8506785 intron CG33181 + chrX_18_8505001 chrX_8505001 RAL-321 3365 chrX 8621984 8622012 chrX 8622084 8622122 14 107 6.0 5.0 5.5 2.2 138 chrX 8621984 intergenic not near genes chrX 8622053 intergenic not near genes chrX 8622122 intergenic not near genes chrX_14_8620001 chrX_8620001 RAL-321 3366 chrX 8727382 8727428 chrX 8727479 8727525 16 96 5.5 2.0 3.8 3.3 143 chrX 8727382 intergenic not near genes chrX 8727454 intergenic not near genes chrX 8727525 intergenic not near genes chrX_16_8725001 chrX_8725001 RAL-321 3367 chrX 8730451 8730464 chrX 8730547 8730560 7 95 0.0 8.5 4.2 1.3 109 chrX 8730451 intergenic not near genes chrX 8730506 intergenic not near genes chrX 8730560 intergenic not near genes chrX_7_8730001 chrX_8730001 RAL-321 3368 chrX 8772228 8772252 chrX 8772327 8772331 5 95 4.5 6.0 5.2 0.8 103 chrX 8772228 intron Lim1 - chrX 8772280 intron Lim1 - chrX 8772331 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-321 3369 chrX 8885647 8885695 chrX 8885767 8885815 18 120 3.0 5.0 4.0 3.6 168 chrX 8885647 intron Moe - chrX 8885731 intron Moe - chrX 8885815 intron Moe - chrX_18_8885001 chrX_8885001 RAL-321 3370 chrX 8894977 8894999 chrX 8895083 8895105 11 105 9.5 3.5 6.5 1.5 128 chrX 8894977 intron Moe - chrX 8895041 intron Moe - chrX 8895105 intron Moe - chrX_11_8895001 chrX_8895001 RAL-321 3371 chrX 8922314 8922363 chrX 8922759 8922796 jockey 20 443 3.0 3.5 3.2 4.8 482 chrX 8922314 intron rdgA + chrX 8922555 intron rdgA + chrX 8922796 intron rdgA + chrX_20_8920001 chrX_8920001 RAL-321 3372 chrX 8943330 8943366 chrX 8943472 8943508 7 137 7.5 3.0 5.2 1.1 178 chrX 8943330 intron rdgA + chrX 8943419 intron rdgA + chrX 8943508 intron rdgA + chrX_7_8940001 chrX_8940001 RAL-321 3373 chrX 8948738 8948790 chrX 8956268 8956320 roo 16 7530 2.5 3.0 2.8 4.2 7582 chrX 8948738 intron rdgA + chrX 8952529 intron rdgA + chrX 8956320 intron rdgA + chrX_16_8950001 chrX_8950001 RAL-321 3374 chrX 8973584 8973634 chrX 8976127 8976177 7 2543 26.5 41.5 34.0 0.2 2593 chrX 8973584 intron,intron,intron rdgA +,CG10962 -,CR43836 - chrX 8974880 intron,intron rdgA +,CR43836 - chrX 8976177 intron,intron rdgA +,CR43836 - chrX_7_8970001 chrX_8970001 RAL-321 3375 chrX 8990741 8990793 chrX 8990862 8990915 21 121 1.0 3.0 2.0 7.0 174 chrX 8990741 intron,intron rdgA +,CR43836 - chrX 8990828 intron,intron rdgA +,CR43836 - chrX 8990915 intron,intron rdgA +,CR43836 - chrX_21_8990001 chrX_8990001 RAL-321 3376 chrX 9058938 9058953 chrX 9059024 9059040 4 88 9.5 2.0 5.8 0.6 102 chrX 9058938 intron CG15365 - chrX 9058989 intron CG15365 - chrX 9059040 intron CG15365 - chrX_4_9055001 chrX_9055001 RAL-321 3377 chrX 9126740 9126777 chrX 9126904 9126942 12 164 4.0 10.0 7.0 1.5 202 chrX 9126740 intron fend - chrX 9126841 intron fend - chrX 9126942 intron fend - chrX_12_9125001 chrX_9125001 RAL-321 3378 chrX 9218061 9218081 chrX 9218172 9218192 6 110 9.5 0.0 4.8 1.0 131 chrX 9218061 3` UTR t - chrX 9218126 3` UTR t - chrX 9218192 3` UTR t - chrX_6_9215001 chrX_9215001 RAL-321 3379 chrX 9439409 9439462 chrX 9439506 9439552 19 93 5.0 8.0 6.5 2.5 143 chrX 9439409 intron mgl - chrX 9439480 intron mgl - chrX 9439552 intron mgl - chrX_19_9435001 chrX_9435001 RAL-321 3380 chrX 9508120 9508159 chrX 9509658 9509690 jockey 14 1536 5.5 5.0 5.2 2.3 1570 chrX 9508120 intron CG32700 - chrX 9508905 intron CG32700 - chrX 9509690 intron CG32700 - chrX_14_9505001 chrX_9505001 RAL-321 3381 chrX 9531635 9531665 chrX 9531735 9531765 8 98 7.0 0.5 3.8 1.7 130 chrX 9531635 intron CG32700 - chrX 9531700 intron CG32700 - chrX 9531765 intron CG32700 - chrX_8_9530001 chrX_9530001 RAL-321 3382 chrX 9555405 9555449 chrX 9555534 9555578 16 129 5.0 5.0 5.0 2.7 173 chrX 9555405 3` UTR RpS28b + chrX 9555492 3` UTR RpS28b + chrX 9555578 3` UTR RpS28b + chrX_16_9555001 chrX_9555001 RAL-321 3383 chrX 9575774 9575794 chrX 9576117 9576138 mdg3 4 338 8.5 3.5 6.0 0.6 364 chrX 9575774 intron,exon CG32699 -,CG42395 - chrX 9575956 intron,intron CG32699 -,CG42395 - chrX 9576138 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-321 3384 chrX 9575797 9575820 chrX 9576114 9576164 mdg3 9 341 5.5 3.5 4.5 1.6 367 chrX 9575797 intron,exon CG32699 -,CG42395 - chrX 9575980 intron,intron CG32699 -,CG42395 - chrX 9576164 intron,5` UTR CG32699 -,CG42395 - chrX_9_9575001 chrX_9575001 RAL-321 3385 chrX 9758027 9758079 chrX 9758132 9758184 15 105 4.0 0.0 2.0 5.0 157 chrX 9758027 intergenic not near genes chrX 9758106 intergenic not near genes chrX 9758184 intergenic not near genes chrX_15_9755001 chrX_9755001 RAL-321 3386 chrX 10106670 10106723 chrX 10106770 10106812 18 99 4.5 5.0 4.8 3.1 142 chrX 10106670 intron RhoU + chrX 10106741 intron RhoU + chrX 10106812 intron RhoU + chrX_18_10105001 chrX_10105001 RAL-321 3387 chrX 10138197 10138247 chrX 10145721 10145771 412 16 7524 5.5 4.5 5.0 2.7 7574 chrX 10138197 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145771 intron,intron RhoU +,CR44894 - chrX_16_10140001 chrX_10140001 RAL-321 3388 chrX 10154271 10154309 chrX 10154367 10154405 8 96 4.5 4.0 4.2 1.5 134 chrX 10154271 intron,intron CR44894 -,CG12645 + chrX 10154338 intron,intron CR44894 -,CG12645 + chrX 10154405 intron,exon CR44894 -,CG12645 + chrX_8_10150001 chrX_10150001 RAL-321 3389 chrX 10167656 10167683 chrX 10167772 10167814 8 122 6.0 2.5 4.2 1.5 158 chrX 10167656 intron,intron CR44894 -,CG43902 + chrX 10167735 intron,intron CR44894 -,CG43902 + chrX 10167814 intron,intron CR44894 -,CG43902 + chrX_8_10165001 chrX_10165001 RAL-321 3390 chrX 10177269 10177296 chrX 10177366 10177394 7 98 3.5 3.0 3.2 1.7 125 chrX 10177269 intron,intron CR44894 -,CG43902 + chrX 10177332 intron,intron CR44894 -,CG43902 + chrX 10177394 intron,intron CR44894 -,CG43902 + chrX_7_10175001 chrX_10175001 RAL-321 3391 chrX 10216836 10216851 chrX 10216927 10216952 11 98 8.5 9.5 9.0 1.1 116 chrX 10216836 3` UTR l(1)G0230 + chrX 10216894 3` UTR l(1)G0230 + chrX 10216952 3` UTR l(1)G0230 + chrX_11_10215001 chrX_10215001 RAL-321 3392 chrX 10267303 10267334 chrX 10276473 10276504 roo 14 9169 1.0 6.0 3.5 3.1 9201 chrX 10267303 3` UTR alpha-Man-I - chrX 10271904 intron alpha-Man-I - chrX 10276504 3` UTR alpha-Man-I - chrX_14_10270001 chrX_10270001 RAL-321 3393 chrX 10306044 10306067 chrX 10306145 10306168 8 101 9.0 0.0 4.5 1.5 124 chrX 10306044 intron alpha-Man-I - chrX 10306106 intron alpha-Man-I - chrX 10306168 intron alpha-Man-I - chrX_8_10305001 chrX_10305001 RAL-321 3394 chrX 10317535 10317578 chrX 10317633 10317676 15 98 0.0 6.0 3.0 3.8 141 chrX 10317535 intron alpha-Man-I - chrX 10317606 intron alpha-Man-I - chrX 10317676 intron alpha-Man-I - chrX_15_10315001 chrX_10315001 RAL-321 3395 chrX 10322301 10322328 chrX 10322429 10322455 9 128 7.5 8.0 7.8 1.0 154 chrX 10322301 intron alpha-Man-I - chrX 10322378 intron alpha-Man-I - chrX 10322455 intron alpha-Man-I - chrX_9_10320001 chrX_10320001 RAL-321 3396 chrX 10348784 10348832 chrX 10356369 10356386 springer 17 7581 3.0 8.0 5.5 2.6 7602 chrX 10348784 intergenic snoRNA:U3:9B + chrX 10352585 intergenic not near genes chrX 10356386 intergenic l(1)G0289 - chrX_17_10350001 chrX_10350001 RAL-321 3397 chrX 10446671 10446712 chrX 10446768 10446814 16 100 3.0 5.0 4.0 3.2 143 chrX 10446671 intron CG32683 - chrX 10446742 intron CG32683 - chrX 10446814 intron CG32683 - chrX_16_10445001 chrX_10445001 RAL-321 3398 chrX 10453051 10453102 chrX 10453262 10453313 22 211 4.5 3.5 4.0 4.4 262 chrX 10453051 intron CG32683 - chrX 10453182 intron CG32683 - chrX 10453313 intron CG32683 - chrX_22_10450001 chrX_10450001 RAL-321 3399 chrX 10550839 10550882 chrX 10552326 10552369 hobo 16 1486 5.0 8.0 6.5 2.1 1530 chrX 10550839 intron spri - chrX 10551604 intron spri - chrX 10552369 intron spri - chrX_16_10550001 chrX_10550001 RAL-321 3400 chrX 10590764 10590816 chrX 10590860 10590912 21 96 8.0 6.5 7.2 2.6 148 chrX 10590764 intergenic Hmr - chrX 10590838 intergenic Hmr - chrX 10590912 intergenic Hmr - chrX_21_10590001 chrX_10590001 RAL-321 3401 chrX 10651609 10651641 chrX 10651745 10651777 16 136 6.0 7.0 6.5 2.1 168 chrX 10651609 intron X11Lbeta + chrX 10651693 intron X11Lbeta + chrX 10651777 intron X11Lbeta + chrX_16_10650001 chrX_10650001 RAL-321 3402 chrX 10686034 10686077 chrX 10691186 10691234 roo 11 5157 8.5 3.5 6.0 1.6 5200 chrX 10686034 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691234 intron X11Lbeta + chrX_11_10685001 chrX_10685001 RAL-321 3403 chrX 10772659 10772685 chrX 10772762 10772777 7 100 7.0 6.0 6.5 0.9 118 chrX 10772659 intron CG15211 + chrX 10772718 intron CG15211 + chrX 10772777 intron CG15211 + chrX_7_10770001 chrX_10770001 RAL-321 3404 chrX 10772686 10772695 chrX 10772759 10772798 Tirant 8 94 6.0 5.0 5.5 1.2 112 chrX 10772686 intron CG15211 + chrX 10772742 intron CG15211 + chrX 10772798 intron CG15211 + chrX_8_10770001 chrX_10770001 RAL-321 3405 chrX 10803022 10803043 chrX 10803127 10803136 8 101 10.5 9.0 9.8 0.7 114 chrX 10803022 intron Imp - chrX 10803079 intron Imp - chrX 10803136 intron Imp - chrX_8_10800001 chrX_10800001 RAL-321 3406 chrX 10876602 10876650 chrX 10876700 10876748 5 97 2.5 6.5 4.5 0.9 146 chrX 10876602 intron CG1637 - chrX 10876675 intron CG1637 - chrX 10876748 intron CG1637 - chrX_5_10875001 chrX_10875001 RAL-321 3407 chrX 10982439 10982490 chrX 10982660 10982711 9 216 5.0 1.5 3.2 2.1 272 chrX 10982439 intron CG42339 - chrX 10982575 intron CG42339 - chrX 10982711 intron CG42339 - chrX_9_10980001 chrX_10980001 RAL-321 3408 chrX 7978953 7978953 chrX 11086014 11086061 4 3107076 20.5 22.0 21.2 0.2 3107108 chrX 7978953 intron sn + chrX 9532507 intron CG32700 - chrX 11086061 intron sev - chrX_4_9530001 chrX_9530001 RAL-321 3409 chrX 11095986 11096018 chrX 11103108 11103140 HMS-Beagle 12 7122 7.5 11.5 9.5 1.1 7154 chrX 11095986 intergenic not near genes chrX 11099563 intergenic not near genes chrX 11103140 intron CG42249 + chrX_12_11095001 chrX_11095001 RAL-321 3410 chrX 11184226 11184257 chrX 11189325 11189356 flea 9 5099 6.5 2.0 4.2 1.7 5130 chrX 11184226 intergenic not near genes chrX 11186791 intergenic not near genes chrX 11189356 intergenic not near genes chrX_9_11185001 chrX_11185001 RAL-321 3411 chrX 11254148 11254196 chrX 11254279 11254327 11 131 5.5 3.0 4.2 2.1 179 chrX 11254148 intron CG44422 - chrX 11254238 intron CG44422 - chrX 11254327 intron CG44422 - chrX_11_11250001 chrX_11250001 RAL-321 3412 chrX 11312036 11312086 chrX 11319409 11319446 Stalker2 14 7366 4.5 4.0 4.2 2.7 7410 chrX 11312036 intergenic not near genes chrX 11315741 intergenic not near genes chrX 11319446 intergenic not near genes chrX_14_11315001 chrX_11315001 RAL-321 3413 chrX 11379746 11379792 chrX 11379911 11379956 15 164 5.0 7.0 6.0 2.1 210 chrX 11379746 intron dlg1 + chrX 11379851 intron dlg1 + chrX 11379956 intron dlg1 + chrX_15_11375001 chrX_11375001 RAL-321 3414 chrX 11409487 11409518 chrX 11409593 11409624 11 106 8.5 3.5 6.0 1.6 137 chrX 11409487 3` UTR dlg1 + chrX 11409556 3` UTR dlg1 + chrX 11409624 3` UTR dlg1 + chrX_11_11405001 chrX_11405001 RAL-321 3415 chrX 11535025 11535046 chrX 11541515 11541536 Burdock 8 6490 11.0 4.5 7.8 0.9 6511 chrX 11535025 intron Drak + chrX 11538280 intron Drak + chrX 11541536 intron Drak + chrX_8_11535001 chrX_11535001 RAL-321 3416 chrX 11558257 11558287 chrX 11558361 11558384 11 103 8.5 0.0 4.2 2.1 127 chrX 11558257 intron CG1572 - chrX 11558320 intron CG1572 - chrX 11558384 intron CG1572 - chrX_11_11555001 chrX_11555001 RAL-321 3417 chrX 11633396 11633448 chrX 11640470 11640522 297 13 7074 5.0 7.0 6.0 1.9 7126 chrX 11633396 intron Ptp10D + chrX 11636959 intron Ptp10D + chrX 11640522 intron Ptp10D + chrX_13_11635001 chrX_11635001 RAL-321 3418 chrX 11645089 11645102 chrX 11648278 11648286 NOF 5 3188 10.5 2.5 6.5 0.7 3197 chrX 11645089 intron Ptp10D + chrX 11646688 intron Ptp10D + chrX 11648286 intron Ptp10D + chrX_5_11645001 chrX_11645001 RAL-321 3419 chrX 11645104 11645133 chrX 11648277 11648323 NOF 6 3186 5.5 2.5 4.0 1.2 3219 chrX 11645104 intron Ptp10D + chrX 11646714 intron Ptp10D + chrX 11648323 intron Ptp10D + chrX_6_11645001 chrX_11645001 RAL-321 3420 chrX 11761990 11762006 chrX 11762089 11762105 6 98 1.5 3.5 2.5 1.7 115 chrX 11761990 intron m + chrX 11762048 intron m + chrX 11762105 intron m + chrX_6_11760001 chrX_11760001 RAL-321 3421 chrX 11794381 11794406 chrX 11794467 11794493 11 95 6.5 5.0 5.8 1.6 112 chrX 11794381 intron CkIIbeta + chrX 11794437 intron CkIIbeta + chrX 11794493 intron CkIIbeta + chrX_11_11790001 chrX_11790001 RAL-321 3422 chrX 11801567 11801571 chrX 11801669 11801673 5 102 18.0 4.0 11.0 0.4 106 chrX 11801567 3` UTR CkIIbeta + chrX 11801620 intergenic CkIIbeta +,Hsc70-3 - chrX 11801673 intergenic Hsc70-3 -,CkIIbeta + chrX_5_11800001 chrX_11800001 RAL-321 3423 chrX 11799747 11799791 chrX 11803372 11803409 4 3620 38.0 32.5 35.2 0.1 3662 chrX 11799747 intron CkIIbeta + chrX 11801578 3` UTR CkIIbeta + chrX 11803409 exon Hsc70-3 - chrX_4_11800001 chrX_11800001 RAL-321 3424 chrX 11804660 11804687 chrX 11804784 11804811 8 124 6.0 7.0 6.5 1.1 151 chrX 11804660 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804811 intron Hsc70-3 - chrX_8_11800001 chrX_11800001 RAL-321 3425 chrX 11818592 11818634 chrX 11818737 11818779 23 142 9.5 11.5 10.5 2.0 187 chrX 11818592 intron rudhira + chrX 11818686 intron rudhira + chrX 11818779 intron rudhira + chrX_23_11815001 chrX_11815001 RAL-321 3426 chrX 11880906 11880921 chrX 11881008 11881023 11 102 4.5 3.5 4.0 2.2 117 chrX 11880906 exon CG10353 - chrX 11880964 intron CG10353 - chrX 11881023 intron CG10353 - chrX_11_11880001 chrX_11880001 RAL-321 3427 chrX 11936551 11936582 chrX 11936670 11936701 13 117 0.0 5.0 2.5 3.7 150 chrX 11936551 intron cac - chrX 11936626 intron cac - chrX 11936701 exon cac - chrX_13_11935001 chrX_11935001 RAL-321 3428 chrX 12094015 12094036 chrX 12094127 12094148 7 111 7.5 4.5 6.0 1.0 133 chrX 12094015 intron,intron CR43960 +,Ten-a + chrX 12094082 intron,intron CR43960 +,Ten-a + chrX 12094148 intron,intron CR43960 +,Ten-a + chrX_7_12090001 chrX_12090001 RAL-321 3429 chrX 12094042 12094060 chrX 12094126 12094172 7 103 4.0 4.5 4.2 1.3 130 chrX 12094042 intron,intron CR43960 +,Ten-a + chrX 12094107 intron,intron CR43960 +,Ten-a + chrX 12094172 intron,intron CR43960 +,Ten-a + chrX_7_12090001 chrX_12090001 RAL-321 3430 chrX 12168122 12168155 chrX 12173584 12173617 I-element 12 5460 5.0 2.0 3.5 2.7 5495 chrX 12168122 intron Ten-a + chrX 12170870 intron Ten-a + chrX 12173617 intron Ten-a + chrX_12_12170001 chrX_12170001 RAL-321 3431 chrX 12218028 12218072 chrX 12218127 12218171 21 94 0.5 5.0 2.8 5.5 143 chrX 12218028 intron Ten-a + chrX 12218100 intron Ten-a + chrX 12218171 intron Ten-a + chrX_21_12215001 chrX_12215001 RAL-321 3432 chrX 12301940 12301977 chrX 12303261 12303278 X-element 8 1315 2.5 2.5 2.5 2.3 1338 chrX 12301940 intron Ten-a + chrX 12302609 intron Ten-a + chrX 12303278 intron Ten-a + chrX_8_12300001 chrX_12300001 RAL-321 3433 chrX 12303798 12303845 chrX 12303920 12303967 15 122 3.5 2.5 3.0 3.8 169 chrX 12303798 intron Ten-a + chrX 12303882 intron Ten-a + chrX 12303967 intron Ten-a + chrX_15_12300001 chrX_12300001 RAL-321 3434 chrX 12307408 12307461 chrX 12307517 12307570 16 108 4.5 3.0 3.8 3.3 162 chrX 12307408 intron Ten-a + chrX 12307489 intron Ten-a + chrX 12307570 intron Ten-a + chrX_16_12305001 chrX_12305001 RAL-321 3435 chrX 12363316 12363370 chrX 12363415 12363469 21 98 5.5 4.0 4.8 3.6 153 chrX 12363316 intergenic not near genes chrX 12363392 intergenic not near genes chrX 12363469 intergenic not near genes chrX_21_12360001 chrX_12360001 RAL-321 3436 chrX 12442072 12442098 chrX 12442174 12442200 10 102 3.5 0.5 2.0 3.3 128 chrX 12442072 intron Pkcdelta + chrX 12442136 intron Pkcdelta + chrX 12442200 intron Pkcdelta + chrX_10_12440001 chrX_12440001 RAL-321 3437 chrX 12460843 12460891 chrX 12460943 12460981 21 100 6.5 4.0 5.2 3.4 138 chrX 12460843 intron Rab40 - chrX 12460912 intron Rab40 - chrX 12460981 intron Rab40 - chrX_21_12460001 chrX_12460001 RAL-321 3438 chrX 12502237 12502260 chrX 12502386 12502394 5 146 8.5 0.0 4.2 1.0 157 chrX 12502237 intron CG2556 + chrX 12502316 intron CG2556 + chrX 12502394 intron CG2556 + chrX_5_12500001 chrX_12500001 RAL-321 3439 chrX 12511326 12511346 chrX 12511430 12511450 5 104 0.0 6.0 3.0 1.2 124 chrX 12511326 intron CG2556 + chrX 12511388 intron CG2556 + chrX 12511450 intron CG2556 + chrX_5_12510001 chrX_12510001 RAL-321 3440 chrX 12528845 12528869 chrX 12528941 12528965 9 96 6.5 2.5 4.5 1.6 120 chrX 12528845 intron CG43921 - chrX 12528905 intron CG43921 - chrX 12528965 intron CG43921 - chrX_9_12525001 chrX_12525001 RAL-321 3441 chrX 12537268 12537559 chrX 12537385 12537655 8 104 0.0 0.0 0.0 8.0 387 chrX 12537268 intron CG43921 - chrX 12537462 intron CG43921 - chrX 12537655 intron CG43921 - chrX_8_12535001 chrX_12535001 RAL-321 3442 chrX 12752261 12752295 chrX 12752368 12752402 15 107 8.5 6.5 7.5 1.8 141 chrX 12752261 5` UTR CR44619 + chrX 12752332 5` UTR CR44619 + chrX 12752402 5` UTR CR44619 + chrX_15_12750001 chrX_12750001 RAL-321 3443 chrX 12757078 12757098 chrX 12757197 12757217 11 119 4.0 4.5 4.2 2.1 139 chrX 12757078 3` UTR ade5 - chrX 12757148 3` UTR ade5 - chrX 12757217 3` UTR ade5 - chrX_11_12755001 chrX_12755001 RAL-321 3444 chrX 12785404 12785456 chrX 12785501 12785553 14 97 9.0 8.0 8.5 1.5 149 chrX 12785404 intergenic Pde9 -,CG32647 - chrX 12785478 intergenic Pde9 - chrX 12785553 intergenic Pde9 - chrX_14_12785001 chrX_12785001 RAL-321 3445 chrX 12901949 12901964 chrX 12902088 12902103 11 139 0.0 3.5 1.8 3.9 154 chrX 12901949 intron CG4407 - chrX 12902026 intron CG4407 - chrX 12902103 intron CG4407 - chrX_11_12900001 chrX_12900001 RAL-321 3446 chrX 12912612 12912661 chrX 12912729 12912770 11 116 0.5 1.5 1.0 5.5 158 chrX 12912612 5` UTR CR45625 + chrX 12912691 5` UTR CR45625 + chrX 12912770 5` UTR CR45625 + chrX_11_12910001 chrX_12910001 RAL-321 3447 chrX 12930577 12930607 chrX 12937713 12937743 HMS-Beagle 9 7136 6.5 11.5 9.0 0.9 7166 chrX 12930577 intron fne + chrX 12934160 intron fne + chrX 12937743 intron fne + chrX_9_12930001 chrX_12930001 RAL-321 3448 chrX 12960746 12960792 chrX 12960847 12960893 14 99 4.0 3.5 3.8 2.9 147 chrX 12960746 3` UTR CG32642 + chrX 12960820 intergenic CG32642 + chrX 12960893 intergenic CG32642 + chrX_14_12960001 chrX_12960001 RAL-321 3449 chrX 12977050 12977061 chrX 12977146 12977157 7 96 0.0 12.0 6.0 1.0 107 chrX 12977050 intergenic not near genes chrX 12977104 intergenic not near genes chrX 12977157 intergenic not near genes chrX_7_12975001 chrX_12975001 RAL-321 3450 chrX 13061332 13061371 chrX 13061463 13061495 14 128 6.0 1.5 3.8 2.9 163 chrX 13061332 intron rad + chrX 13061414 intron rad + chrX 13061495 intron rad + chrX_14_13060001 chrX_13060001 RAL-321 3451 chrX 13146576 13146623 chrX 13146684 13146731 23 108 4.5 5.0 4.8 4.0 155 chrX 13146576 intron CG32645 + chrX 13146654 intron CG32645 + chrX 13146731 intron CG32645 + chrX_23_13145001 chrX_13145001 RAL-321 3452 chrX 13172332 13172382 chrX 13172428 13172478 17 95 4.0 4.5 4.2 3.3 146 chrX 13172332 exon CG34411 - chrX 13172405 intron CG34411 - chrX 13172478 intron CG34411 - chrX_17_13170001 chrX_13170001 RAL-321 3453 chrX 13262464 13262477 chrX 13262588 13262601 7 124 6.0 3.5 4.8 1.2 137 chrX 13262464 3` UTR comt + chrX 13262532 intergenic comt +,HDAC4 - chrX 13262601 intergenic HDAC4 -,comt + chrX_7_13260001 chrX_13260001 RAL-321 3454 chrX 13300708 13300729 chrX 13300776 13300825 11 85 3.5 2.0 2.8 2.9 117 chrX 13300708 intron CG1764 - chrX 13300766 intron CG1764 - chrX 13300825 intron CG1764 - chrX_11_13300001 chrX_13300001 RAL-321 3455 chrX 13342451 13342463 chrX 13342553 13342570 9 105 1.5 0.0 0.8 5.0 119 chrX 13342451 intergenic not near genes chrX 13342510 intergenic not near genes chrX 13342570 intergenic not near genes chrX_9_13340001 chrX_13340001 RAL-321 3456 chrX 13374829 13374857 chrX 13374924 13374957 16 98 8.0 5.0 6.5 2.1 128 chrX 13374829 intron CG1640 + chrX 13374893 intron CG1640 + chrX 13374957 intron CG1640 + chrX_16_13370001 chrX_13370001 RAL-321 3457 chrX 13374858 13374862 chrX 13374918 13374962 4 90 7.5 4.0 5.8 0.6 104 chrX 13374858 intron CG1640 + chrX 13374910 intron CG1640 + chrX 13374962 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-321 3458 chrX 13401466 13401515 chrX 13401838 13401887 jockey 9 370 0.0 5.0 2.5 2.6 421 chrX 13401466 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401887 3` UTR CG12725 - chrX_9_13400001 chrX_13400001 RAL-321 3459 chrX 13429450 13429491 chrX 13430619 13430660 jockey 16 1169 5.0 9.5 7.2 2.0 1210 chrX 13429450 intergenic not near genes chrX 13430055 intergenic not near genes chrX 13430660 intergenic not near genes chrX_16_13430001 chrX_13430001 RAL-321 3460 chrX 13451319 13451356 chrX 13453943 13453980 4 2624 19.0 18.0 18.5 0.2 2661 chrX 13451319 intron Neto + chrX 13452650 intron Neto + chrX 13453980 intron Neto + chrX_4_13450001 chrX_13450001 RAL-321 3461 chrX 13463630 13463676 chrX 13469227 13469253 mdg3 17 5593 4.0 8.0 6.0 2.4 5623 chrX 13463630 intron Neto + chrX 13466442 intron Neto + chrX 13469253 intron Neto + chrX_17_13465001 chrX_13465001 RAL-321 3462 chrX 13601344 13601394 chrX 13601466 13601521 16 124 6.0 3.5 4.8 2.8 177 chrX 13601344 intron up - chrX 13601432 intron up - chrX 13601521 intron up - chrX_16_13600001 chrX_13600001 RAL-321 3463 chrX 13603839 13603860 chrX 13603945 13603966 10 106 5.0 4.5 4.8 1.7 127 chrX 13603839 intergenic not near genes chrX 13603902 intergenic CR44654 + chrX 13603966 intergenic CR44654 + chrX_10_13600001 chrX_13600001 RAL-321 3464 chrX 13734075 13734110 chrX 13734191 13734210 5 113 5.0 8.0 6.5 0.7 135 chrX 13734075 intron g - chrX 13734142 intron g - chrX 13734210 intron g - chrX_5_13730001 chrX_13730001 RAL-321 3465 chrX 13748671 13748681 chrX 13748766 13748786 7 104 8.0 4.0 6.0 1.0 115 chrX 13748671 intron Pdcd4 - chrX 13748728 intron Pdcd4 - chrX 13748786 intron Pdcd4 - chrX_7_13745001 chrX_13745001 RAL-321 3466 chrX 13794593 13794643 chrX 13794743 13794783 8 148 4.0 6.5 5.2 1.3 190 chrX 13794593 intron inaE + chrX 13794688 intron inaE + chrX 13794783 intron inaE + chrX_8_13790001 chrX_13790001 RAL-321 3467 chrX 13796270 13796276 chrX 13799913 13799919 5 3643 8.0 22.0 15.0 0.3 3649 chrX 13796270 intron inaE + chrX 13798094 intron inaE + chrX 13799919 intron inaE + chrX_5_13795001 chrX_13795001 RAL-321 3468 chrX 13821456 13821476 chrX 13821551 13821573 6 95 6.0 6.0 6.0 0.9 117 chrX 13821456 intron Clic - chrX 13821514 intron Clic - chrX 13821573 intron Clic - chrX_6_13820001 chrX_13820001 RAL-321 3469 chrX 13843374 13843400 chrX 13843547 13843573 8 173 8.0 2.5 5.2 1.3 199 chrX 13843374 intron AMPdeam - chrX 13843474 intron AMPdeam - chrX 13843573 intron AMPdeam - chrX_8_13840001 chrX_13840001 RAL-321 3470 chrX 13908777 13908798 chrX 13908875 13908896 6 96 5.5 7.0 6.2 0.8 119 chrX 13908777 intron mamo - chrX 13908836 intron mamo - chrX 13908896 intron mamo - chrX_6_13905001 chrX_13905001 RAL-321 3471 chrX 13934276 13934316 chrX 13934379 13934419 14 103 4.5 4.0 4.2 2.7 143 chrX 13934276 intron mamo - chrX 13934348 intron mamo - chrX 13934419 intron mamo - chrX_14_13930001 chrX_13930001 RAL-321 3472 chrX 13935496 13935527 chrX 13935599 13935628 10 103 7.0 12.0 9.5 1.0 132 chrX 13935496 intron mamo - chrX 13935562 intron mamo - chrX 13935628 intron mamo - chrX_10_13935001 chrX_13935001 RAL-321 3473 chrX 13937957 13938001 chrX 13941248 13941292 I-element 17 3291 3.0 3.0 3.0 4.2 3335 chrX 13937957 intron mamo - chrX 13939624 intron mamo - chrX 13941292 intron mamo - chrX_17_13935001 chrX_13935001 RAL-321 3474 chrX 13943272 13943299 chrX 13943383 13943410 9 111 0.5 8.0 4.2 1.7 138 chrX 13943272 intron mamo - chrX 13943341 intron mamo - chrX 13943410 intron mamo - chrX_9_13940001 chrX_13940001 RAL-321 3475 chrX 13057298 13057304 chrX 13966949 13966949 6 909647 24.0 11.0 17.5 0.3 909651 chrX 13057298 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_6_13510001 chrX_13510001 RAL-321 3476 chrX 13975877 13975903 chrX 13975974 13976000 9 97 0.0 7.0 3.5 2.0 123 chrX 13975877 intron mamo - chrX 13975938 intron mamo - chrX 13976000 intron mamo - chrX_9_13975001 chrX_13975001 RAL-321 3477 chrX 14105005 14105050 chrX 14114174 14114205 roo 15 9169 7.5 5.0 6.2 2.1 9200 chrX 14105005 intergenic not near genes chrX 14109605 intergenic not near genes chrX 14114205 5` UTR CR44657 + chrX_15_14105001 chrX_14105001 RAL-321 3478 chrX 14122597 14122626 chrX 14122693 14122722 10 95 10.0 0.0 5.0 1.7 125 chrX 14122597 intergenic not near genes chrX 14122660 intergenic not near genes chrX 14122722 intergenic not near genes chrX_10_14120001 chrX_14120001 RAL-321 3479 chrX 14157578 14157598 chrX 14163255 14163275 297 7 5677 8.5 7.5 8.0 0.8 5697 chrX 14157578 intergenic not near genes chrX 14160426 intergenic not near genes chrX 14163275 intergenic not near genes chrX_7_14160001 chrX_14160001 RAL-321 3480 chrX 14188050 14188096 chrX 14188153 14188191 21 103 5.5 4.5 5.0 3.5 141 chrX 14188050 intergenic CG12481 + chrX 14188120 intergenic CG12481 + chrX 14188191 intergenic CG12481 + chrX_21_14185001 chrX_14185001 RAL-321 3481 chrX 14361674 14361702 chrX 14361882 14361913 8 210 5.5 3.5 4.5 1.5 239 chrX 14361674 intron dpr8 + chrX 14361794 intron dpr8 + chrX 14361913 intron dpr8 + chrX_8_14360001 chrX_14360001 RAL-321 3482 chrX 14381394 14381410 chrX 14381568 14381584 7 174 5.5 0.0 2.8 1.8 190 chrX 14381394 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381489 intron dpr8 + chrX 14381584 intron dpr8 + chrX_7_14380001 chrX_14380001 RAL-321 3483 chrX 14407249 14407274 chrX 14407351 14407376 7 102 0.0 4.5 2.2 2.2 127 chrX 14407249 intron dpr8 + chrX 14407312 intron dpr8 + chrX 14407376 intron dpr8 + chrX_7_14405001 chrX_14405001 RAL-321 3484 chrX 14411240 14411292 chrX 14411338 14411385 26 95 6.0 4.0 5.0 4.3 145 chrX 14411240 intron dpr8 + chrX 14411312 intron dpr8 + chrX 14411385 intron dpr8 + chrX_26_14410001 chrX_14410001 RAL-321 3485 chrX 14416295 14416327 chrX 14421082 14421114 F-element 10 4787 7.0 10.0 8.5 1.1 4819 chrX 14416295 intron dpr8 + chrX 14418704 intron dpr8 + chrX 14421114 intron dpr8 + chrX_10_14415001 chrX_14415001 RAL-321 3486 chrX 14484959 14484986 chrX 14485068 14485095 12 109 0.0 6.5 3.2 2.9 136 chrX 14484959 intergenic not near genes chrX 14485027 intergenic not near genes chrX 14485095 intergenic not near genes chrX_12_14485001 chrX_14485001 RAL-321 3487 chrX 14531340 14531383 chrX 14531449 14531492 19 109 7.0 3.0 5.0 3.2 152 chrX 14531340 intergenic not near genes chrX 14531416 intergenic not near genes chrX 14531492 intergenic not near genes chrX_19_14530001 chrX_14530001 RAL-321 3488 chrX 14560250 14560300 chrX 14560354 14560404 14 103 2.0 3.0 2.5 4.0 154 chrX 14560250 intergenic not near genes chrX 14560327 intergenic not near genes chrX 14560404 intergenic not near genes chrX_14_14560001 chrX_14560001 RAL-321 3489 chrX 14597716 14597748 chrX 14597813 14597845 10 97 5.5 3.0 4.2 1.9 129 chrX 14597716 intron CG9413 - chrX 14597780 intron CG9413 - chrX 14597845 intron CG9413 - chrX_10_14595001 chrX_14595001 RAL-321 3490 chrX 14610184 14610228 chrX 14610297 14610340 21 113 6.5 3.5 5.0 3.5 156 chrX 14610184 intron NetA - chrX 14610262 intron NetA - chrX 14610340 intron NetA - chrX_21_14610001 chrX_14610001 RAL-321 3491 chrX 14636457 14636485 chrX 14641904 14641946 I-element 12 5458 3.5 4.0 3.8 2.5 5489 chrX 14636457 intron NetA - chrX 14639202 intron NetA - chrX 14641946 intron NetA - chrX_12_14635001 chrX_14635001 RAL-321 3492 chrX 14714023 14714065 chrX 14714125 14714167 12 102 4.0 3.5 3.8 2.5 144 chrX 14714023 intron NetB - chrX 14714095 intron NetB - chrX 14714167 intron NetB - chrX_12_14710001 chrX_14710001 RAL-321 3493 chrX 14778017 14778057 chrX 14782834 14782855 Doc 16 4815 6.0 10.0 8.0 1.8 4838 chrX 14778017 intergenic CG5347 + chrX 14780436 intergenic not near genes chrX 14782855 intergenic Ag5r2 - chrX_16_14780001 chrX_14780001 RAL-321 3494 chrX 14818753 14818798 chrX 14823977 14823992 copia 11 5215 4.0 5.5 4.8 1.9 5239 chrX 14818753 intron rut - chrX 14821372 intron rut - chrX 14823992 intron rut - chrX_11_14820001 chrX_14820001 RAL-321 3495 chrX 14936847 14936880 chrX 14946124 14946157 roo 11 9277 9.0 5.5 7.2 1.3 9310 chrX 14936847 intron pdgy - chrX 14941502 intron pdgy - chrX 14946157 intron pdgy - chrX_11_14940001 chrX_14940001 RAL-321 3496 chrX 14974929 14974977 chrX 14979821 14979869 16 4894 37.5 39.0 38.2 0.4 4940 chrX 14974929 intron eag + chrX 14977399 intron eag + chrX 14979869 intron eag + chrX_16_14975001 chrX_14975001 RAL-321 3497 chrX 15024220 15024240 chrX 15024321 15024341 7 101 4.0 8.0 6.0 1.0 121 chrX 15024220 intron hiw - chrX 15024280 intron hiw - chrX 15024341 intron hiw - chrX_7_15020001 chrX_15020001 RAL-321 3498 chrX 15149508 15149549 chrX 15149606 15149647 17 97 5.0 3.5 4.2 3.3 139 chrX 15149508 intron CG9095 - chrX 15149578 intron CG9095 - chrX 15149647 intron CG9095 - chrX_17_15145001 chrX_15145001 RAL-321 3499 chrX 15200621 15200640 chrX 15200717 15200736 12 96 5.5 3.0 4.2 2.3 115 chrX 15200621 intergenic not near genes chrX 15200678 intergenic not near genes chrX 15200736 intergenic not near genes chrX_12_15200001 chrX_15200001 RAL-321 3500 chrX 15202049 15202094 chrX 15202175 15202220 22 126 5.5 4.5 5.0 3.7 171 chrX 15202049 intergenic not near genes chrX 15202134 intergenic not near genes chrX 15202220 intergenic not near genes chrX_22_15200001 chrX_15200001 RAL-321 3501 chrX 15212245 15212284 chrX 15212367 15212381 11 116 2.5 5.5 4.0 2.2 136 chrX 15212245 intergenic not near genes chrX 15212313 intergenic not near genes chrX 15212381 intergenic not near genes chrX_11_15210001 chrX_15210001 RAL-321 3502 chrX 15234347 15234389 chrX 15234450 15234487 15 103 8.5 5.0 6.8 1.9 140 chrX 15234347 intergenic not near genes chrX 15234417 intergenic not near genes chrX 15234487 intergenic not near genes chrX_15_15230001 chrX_15230001 RAL-321 3503 chrX 15248241 15248292 chrX 15248337 15248388 15 96 1.0 4.0 2.5 4.3 147 chrX 15248241 intergenic not near genes chrX 15248314 intergenic not near genes chrX 15248388 intergenic not near genes chrX_15_15245001 chrX_15245001 RAL-321 3504 chrX 15273689 15273737 chrX 15274876 15274885 1360 13 1174 6.0 1.0 3.5 2.9 1196 chrX 15273689 intergenic not near genes chrX 15274287 intergenic not near genes chrX 15274885 intergenic not near genes chrX_13_15270001 chrX_15270001 RAL-321 3505 chrX 15277618 15277666 chrX 15277722 15277771 23 102 3.5 5.0 4.2 4.4 153 chrX 15277618 intergenic not near genes chrX 15277694 intergenic not near genes chrX 15277771 intergenic not near genes chrX_23_15275001 chrX_15275001 RAL-321 3506 chrX 15358287 15358338 chrX 15358395 15358446 22 108 4.0 5.0 4.5 4.0 159 chrX 15358287 intron acj6 - chrX 15358366 intron acj6 - chrX 15358446 intron acj6 - chrX_22_15355001 chrX_15355001 RAL-321 3507 chrX 15413033 15413080 chrX 15417355 15417402 Juan 14 4321 4.5 6.0 5.2 2.3 4369 chrX 15413033 intron Cngl - chrX 15415218 intron Cngl - chrX 15417402 intron Cngl - chrX_14_15415001 chrX_15415001 RAL-321 3508 chrX 15421899 15421950 chrX 15423430 15423449 pogo 18 1527 3.5 5.0 4.2 3.5 1550 chrX 15421899 intron Cngl - chrX 15422674 intron Cngl - chrX 15423449 intron Cngl - chrX_18_15420001 chrX_15420001 RAL-321 3509 chrX 15435687 15435701 chrX 15436129 15436148 rover 9 451 0.5 5.5 3.0 2.2 461 chrX 15435687 intron Cngl - chrX 15435918 intron Cngl - chrX 15436148 intron Cngl - chrX_9_15435001 chrX_15435001 RAL-321 3510 chrX 15591187 15591206 chrX 15591258 15591302 9 91 0.5 7.0 3.8 1.9 115 chrX 15591187 intron CG9220 - chrX 15591244 intron CG9220 - chrX 15591302 intron CG9220 - chrX_9_15590001 chrX_15590001 RAL-321 3511 chrX 15633997 15634029 chrX 15634393 15634426 6 397 0.0 3.0 1.5 2.4 429 chrX 15633997 intergenic not near genes chrX 15634212 intergenic not near genes chrX 15634426 intergenic not near genes chrX_6_15630001 chrX_15630001 RAL-321 3512 chrX 15680478 15680492 chrX 15680586 15680600 5 108 0.0 0.0 0.0 5.0 122 chrX 15680478 intergenic not near genes chrX 15680539 intergenic not near genes chrX 15680600 intergenic not near genes chrX_5_15680001 chrX_15680001 RAL-321 3513 chrX 15818756 15818807 chrX 15818852 15818903 27 92 6.5 7.5 7.0 3.4 147 chrX 15818756 intron sd + chrX 15818830 intron sd + chrX 15818903 intron sd + chrX_27_15815001 chrX_15815001 RAL-321 3514 chrX 16004387 16004434 chrX 16004493 16004540 17 105 4.5 4.0 4.2 3.3 153 chrX 16004387 intron vap - chrX 16004464 intron vap - chrX 16004540 intron vap - chrX_17_16000001 chrX_16000001 RAL-321 3515 chrX 16074121 16074163 chrX 16074477 16074519 20 356 0.5 4.0 2.2 6.2 398 chrX 16074121 intergenic not near genes chrX 16074320 intergenic Tob - chrX 16074519 intergenic Tob - chrX_20_16070001 chrX_16070001 RAL-321 3516 chrX 16160278 16160303 chrX 16160374 16160399 11 96 9.5 6.5 8.0 1.2 121 chrX 16160278 intergenic not near genes chrX 16160338 intergenic not near genes chrX 16160399 intergenic not near genes chrX_11_16160001 chrX_16160001 RAL-321 3517 chrX 16222764 16222804 chrX 16231134 16231174 roo 18 8370 6.0 6.5 6.2 2.5 8410 chrX 16222764 intergenic not near genes chrX 16226969 intergenic not near genes chrX 16231174 intergenic not near genes chrX_18_16225001 chrX_16225001 RAL-321 3518 chrX 16248970 16249007 chrX 16249085 16249122 15 115 5.5 5.5 5.5 2.3 152 chrX 16248970 intergenic not near genes chrX 16249046 intergenic not near genes chrX 16249122 intergenic not near genes chrX_15_16245001 chrX_16245001 RAL-321 3519 chrX 16295506 16295533 chrX 16295610 16295637 12 104 11.5 0.0 5.8 1.8 131 chrX 16295506 intron CG9911 - chrX 16295572 intron CG9911 - chrX 16295637 intron CG9911 - chrX_12_16295001 chrX_16295001 RAL-321 3520 chrX 16340647 16340696 chrX 16349822 16349873 roo 9 9176 1.0 7.0 4.0 1.8 9226 chrX 16340647 intergenic Dsp1 + chrX 16345260 intergenic not near genes chrX 16349873 intergenic sl + chrX_9_16345001 chrX_16345001 RAL-321 3521 chrX 16355258 16355292 chrX 16355440 16355474 15 181 7.0 7.5 7.2 1.8 216 chrX 16355258 3` UTR sl + chrX 16355366 3` UTR sl + chrX 16355474 3` UTR sl + chrX_15_16355001 chrX_16355001 RAL-321 3522 chrX 16362923 16362938 chrX 16363034 16363049 6 111 7.0 5.5 6.2 0.8 126 chrX 16362923 intron nonA + chrX 16362986 intron nonA + chrX 16363049 intron nonA + chrX_6_16360001 chrX_16360001 RAL-321 3523 chrX 16362943 16362967 chrX 16363033 16363078 10 101 3.0 5.5 4.2 1.9 135 chrX 16362943 intron nonA + chrX 16363010 intron nonA + chrX 16363078 intron nonA + chrX_10_16360001 chrX_16360001 RAL-321 3524 chrX 16404335 16404385 chrX 16404451 16404501 11 114 3.0 3.5 3.2 2.6 166 chrX 16404335 intron CG9981 - chrX 16404418 intron CG9981 - chrX 16404501 5` UTR CG9981 - chrX_11_16400001 chrX_16400001 RAL-321 3525 chrX 16492625 16492676 chrX 16498222 16498266 mdg3 24 5597 8.5 3.5 6.0 3.4 5641 chrX 16492625 intron para - chrX 16495446 intron para - chrX 16498266 intron para - chrX_24_16495001 chrX_16495001 RAL-321 3526 chrX 16529381 16529443 chrX 16529520 16529574 7 132 0.5 4.5 2.5 2.0 193 chrX 16529381 intron para - chrX 16529478 intron para - chrX 16529574 intron para - chrX_7_16525001 chrX_16525001 RAL-321 3527 chrX 16623466 16623483 chrX 16623572 16623589 8 106 7.5 0.5 4.0 1.6 123 chrX 16623466 intergenic not near genes chrX 16623528 intergenic Rok - chrX 16623589 intergenic Rok - chrX_8_16620001 chrX_16620001 RAL-321 3528 chrX 16764718 16764734 chrX 16764815 16764831 6 97 5.5 2.5 4.0 1.2 113 chrX 16764718 intron if - chrX 16764774 intron if - chrX 16764831 intron if - chrX_6_16760001 chrX_16760001 RAL-321 3529 chrX 16785254 16785300 chrX 16785378 16785424 14 124 5.5 3.5 4.5 2.5 170 chrX 16785254 3` UTR CG9609 - chrX 16785339 3` UTR CG9609 - chrX 16785424 3` UTR CG9609 - chrX_14_16785001 chrX_16785001 RAL-321 3530 chrX 16821218 16821260 chrX 16821318 16821361 7 99 4.0 0.0 2.0 2.3 143 chrX 16821218 intron CG4829 + chrX 16821290 intron CG4829 + chrX 16821361 intron CG4829 + chrX_7_16820001 chrX_16820001 RAL-321 3531 chrX 16833185 16833224 chrX 16833290 16833329 15 105 5.0 3.0 4.0 3.0 144 chrX 16833185 intron CG13004 - chrX 16833257 intron CG13004 - chrX 16833329 intron CG13004 - chrX_15_16830001 chrX_16830001 RAL-321 3532 chrX 16870065 16870096 chrX 16870167 16870199 7 102 4.0 5.5 4.8 1.2 134 chrX 16870065 intron CG13003 - chrX 16870132 intron CG13003 - chrX 16870199 intron CG13003 - chrX_7_16870001 chrX_16870001 RAL-321 3533 chrX 16936001 16936033 chrX 16936439 16936471 jockey 10 438 0.0 5.0 2.5 2.9 470 chrX 16936001 intron CG4928 + chrX 16936236 intron CG4928 + chrX 16936471 intron CG4928 + chrX_10_16935001 chrX_16935001 RAL-321 3534 chrX 16978863 16978891 chrX 16979138 16979166 12 276 33.0 19.5 26.2 0.4 303 chrX 16978863 intron CG45002 - chrX 16979014 intron CG45002 - chrX 16979166 intron CG45002 - chrX_12_16975001 chrX_16975001 RAL-321 3535 chrX 17001859 17001904 chrX 17001970 17001981 13 106 7.5 3.5 5.5 2.0 122 chrX 17001859 intron CG45002 - chrX 17001920 intron CG45002 - chrX 17001981 intron CG45002 - chrX_13_17000001 chrX_17000001 RAL-321 3536 chrX 17011953 17011999 chrX 17012050 17012080 12 89 5.0 6.5 5.8 1.8 127 chrX 17011953 intron CG45002 - chrX 17012016 intron CG45002 - chrX 17012080 intron CG45002 - chrX_12_17010001 chrX_17010001 RAL-321 3537 chrX 17057918 17057965 chrX 17058179 17058226 pogo 16 261 2.5 3.0 2.8 4.2 308 chrX 17057918 intron CG45002 - chrX 17058072 intron CG45002 - chrX 17058226 intron CG45002 - chrX_16_17055001 chrX_17055001 RAL-321 3538 chrX 17063158 17063208 chrX 17063265 17063315 17 107 4.5 6.0 5.2 2.7 157 chrX 17063158 intron CG45002 - chrX 17063236 intron CG45002 - chrX 17063315 intron CG45002 - chrX_17_17060001 chrX_17060001 RAL-321 3539 chrX 17088188 17088197 chrX 17088801 17088810 7 613 2.0 7.0 4.5 1.3 622 chrX 17088188 intergenic not near genes chrX 17088499 intergenic not near genes chrX 17088810 intergenic not near genes chrX_7_17085001 chrX_17085001 RAL-321 3540 chrX 17122626 17122670 chrX 17122736 17122766 15 108 3.5 4.5 4.0 3.0 140 chrX 17122626 intron CG5004 + chrX 17122696 intron CG5004 + chrX 17122766 intron CG5004 + chrX_15_17120001 chrX_17120001 RAL-321 3541 chrX 17195184 17195231 chrX 17200290 17200334 flea 18 5100 5.0 6.5 5.8 2.6 5150 chrX 17195184 3` UTR baz + chrX 17197759 3` UTR baz + chrX 17200334 3` UTR baz + chrX_18_17195001 chrX_17195001 RAL-321 3542 chrX 17205834 17205853 chrX 17205944 17205963 7 110 7.0 7.0 7.0 0.9 129 chrX 17205834 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205963 intergenic CG32564 + chrX_7_17205001 chrX_17205001 RAL-321 3543 chrX 17237513 17237530 chrX 17237617 17237634 5 104 7.5 8.5 8.0 0.6 121 chrX 17237513 intron f + chrX 17237574 intron f + chrX 17237634 intron f + chrX_5_17235001 chrX_17235001 RAL-321 3544 chrX 17275517 17275533 chrX 17275609 17275616 5 92 6.5 7.0 6.8 0.6 99 chrX 17275517 intron f + chrX 17275566 intron f + chrX 17275616 intron f + chrX_5_17275001 chrX_17275001 RAL-321 3545 chrX 17275534 17275538 chrX 17275608 17275621 4 86 6.5 7.0 6.8 0.5 87 chrX 17275534 intron f + chrX 17275578 intron f + chrX 17275621 intron f + chrX_4_17275001 chrX_17275001 RAL-321 3546 chrX 17275548 17275564 chrX 17275607 17275663 6 88 3.5 6.5 5.0 1.0 115 chrX 17275548 intron f + chrX 17275606 intron f + chrX 17275663 intron f + chrX_6_17275001 chrX_17275001 RAL-321 3547 chrX 17316350 17316388 chrX 17316454 17316467 20 102 5.0 0.0 2.5 5.7 117 chrX 17316350 intron B-H2 + chrX 17316408 intron B-H2 + chrX 17316467 intron B-H2 + chrX_20_17315001 chrX_17315001 RAL-321 3548 chrX 17455761 17455811 chrX 17455881 17455931 19 120 4.0 3.0 3.5 4.2 170 chrX 17455761 intergenic not near genes chrX 17455846 intergenic not near genes chrX 17455931 intergenic not near genes chrX_19_17455001 chrX_17455001 RAL-321 3549 chrX 17545474 17545524 chrX 17545570 17545609 22 90 2.0 4.5 3.2 5.2 135 chrX 17545474 intron CG43658 - chrX 17545542 intron CG43658 - chrX 17545609 intron CG43658 - chrX_22_17545001 chrX_17545001 RAL-321 3550 chrX 17546954 17547003 chrX 17547107 17547156 9 153 2.0 5.5 3.8 1.9 202 chrX 17546954 intron CG43658 - chrX 17547055 intron CG43658 - chrX 17547156 intron CG43658 - chrX_9_17545001 chrX_17545001 RAL-321 3551 chrX 17680876 17680925 chrX 17680968 17681021 11 94 5.0 6.0 5.5 1.7 145 chrX 17680876 intron chas - chrX 17680948 intron chas - chrX 17681021 intron chas - chrX_11_17680001 chrX_17680001 RAL-321 3552 chrX 17685445 17685473 chrX 17685548 17685559 13 102 1.0 7.5 4.2 2.5 114 chrX 17685445 intron chas - chrX 17685502 intron chas - chrX 17685559 intron chas - chrX_13_17685001 chrX_17685001 RAL-321 3553 chrX 17708810 17708857 chrX 17708907 17708956 17 98 3.0 7.0 5.0 2.8 146 chrX 17708810 intron CG8173 - chrX 17708883 intron CG8173 - chrX 17708956 intron CG8173 - chrX_17_17705001 chrX_17705001 RAL-321 3554 chrX 17766339 17766374 chrX 17766456 17766492 10 117 3.5 3.5 3.5 2.2 153 chrX 17766339 intergenic not near genes chrX 17766416 intergenic not near genes chrX 17766492 intergenic not near genes chrX_10_17765001 chrX_17765001 RAL-321 3555 chrX 17792943 17792981 chrX 17796261 17796299 flea 13 3317 1.5 2.5 2.0 4.3 3356 chrX 17792943 intron OdsH + chrX 17794621 intron OdsH + chrX 17796299 intron OdsH + chrX_13_17790001 chrX_17790001 RAL-321 3556 chrX 17972759 17972776 chrX 17972872 17972889 7 113 2.5 0.0 1.2 3.2 130 chrX 17972759 intron Sh - chrX 17972824 intron Sh - chrX 17972889 intron Sh - chrX_7_17970001 chrX_17970001 RAL-321 3557 chrX 18177013 18177058 chrX 18177126 18177156 12 112 1.0 3.0 2.0 4.0 143 chrX 18177013 intergenic not near genes chrX 18177084 intergenic not near genes chrX 18177156 intergenic Frq2 + chrX_12_18175001 chrX_18175001 RAL-321 3558 chrX 18194048 18194100 chrX 18194603 18194620 BS 15 553 7.5 3.5 5.5 2.3 572 chrX 18194048 intron Frq2 + chrX 18194334 intron Frq2 + chrX 18194620 intron Frq2 + chrX_15_18190001 chrX_18190001 RAL-321 3559 chrX 18218018 18218067 chrX 18218154 18218204 14 137 5.0 4.5 4.8 2.4 186 chrX 18218018 intron CG33639 - chrX 18218111 intron CG33639 - chrX 18218204 intron CG33639 - chrX_14_18215001 chrX_18215001 RAL-321 3560 chrX 18320490 18320502 chrX 18320642 18320654 9 152 0.0 5.5 2.8 2.4 164 chrX 18320490 intron CG6023 - chrX 18320572 intron CG6023 - chrX 18320654 intron CG6023 - chrX_9_18320001 chrX_18320001 RAL-321 3561 chrX 18427360 18427407 chrX 18427791 18427838 25 431 5.0 3.0 4.0 5.0 478 chrX 18427360 intergenic CG42323 + chrX 18427599 intergenic not near genes chrX 18427838 intergenic not near genes chrX_25_18425001 chrX_18425001 RAL-321 3562 chrX 18429477 18429521 chrX 18434808 18434852 Transpac 20 5331 10.0 12.5 11.2 1.6 5375 chrX 18429477 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434852 intergenic not near genes chrX_20_18430001 chrX_18430001 RAL-321 3563 chrX 18453612 18453618 chrX 18453680 18453713 4 81 7.5 10.0 8.8 0.4 101 chrX 18453612 intron CG32547 - chrX 18453662 intron CG32547 - chrX 18453713 intron CG32547 - chrX_4_18450001 chrX_18450001 RAL-321 3564 chrX 18490029 18490042 chrX 18490201 18490217 6 174 7.0 3.0 5.0 1.0 188 chrX 18490029 intergenic CG15046 - chrX 18490123 intergenic not near genes chrX 18490217 intergenic not near genes chrX_6_18490001 chrX_18490001 RAL-321 3565 chrX 18555360 18555410 chrX 18556901 18556952 transib2 15 1542 3.5 9.5 6.5 2.0 1592 chrX 18555360 intron Bx + chrX 18556156 intron Bx + chrX 18556952 intron Bx + chrX_15_18555001 chrX_18555001 RAL-321 3566 chrX 18645005 18645047 chrX 18645114 18645165 10 116 6.5 6.0 6.2 1.4 160 chrX 18645005 intron Rip11 - chrX 18645085 intron Rip11 - chrX 18645165 intron Rip11 - chrX_10_18645001 chrX_18645001 RAL-321 3567 chrX 18698828 18698876 chrX 18698965 18699013 12 137 6.0 7.0 6.5 1.6 185 chrX 18698828 intergenic not near genes chrX 18698920 intergenic not near genes chrX 18699013 intergenic not near genes chrX_12_18695001 chrX_18695001 RAL-321 3568 chrX 18754326 18754345 chrX 18758006 18758032 297 12 3686 6.0 5.0 5.5 1.8 3706 chrX 18754326 intergenic not near genes chrX 18756179 intergenic not near genes chrX 18758032 intergenic not near genes chrX_12_18755001 chrX_18755001 RAL-321 3569 chrX 18896503 18896546 chrX 18896634 18896677 15 130 5.5 8.5 7.0 1.9 174 chrX 18896503 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896677 intergenic CG7349 + chrX_15_18895001 chrX_18895001 RAL-321 3570 chrX 18957059 18957076 chrX 18965735 18965747 roo 7 8675 4.0 0.0 2.0 2.3 8688 chrX 18957059 intron CG43759 + chrX 18961403 intron CG43759 + chrX 18965747 intron CG43759 + chrX_7_18960001 chrX_18960001 RAL-321 3571 chrX 19060390 19060439 chrX 19065194 19065243 Doc 23 4804 3.0 5.0 4.0 4.6 4853 chrX 19060390 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065243 intron CG14190 + chrX_23_19060001 chrX_19060001 RAL-321 3572 chrX 19073664 19073698 chrX 19073771 19073805 14 107 9.5 5.0 7.2 1.7 141 chrX 19073664 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073805 intergenic not near genes chrX_14_19070001 chrX_19070001 RAL-321 3573 chrX 19080306 19080312 chrX 19080432 19080438 4 126 12.5 3.0 7.8 0.5 132 chrX 19080306 intergenic not near genes chrX 19080372 intergenic not near genes chrX 19080438 intergenic not near genes chrX_4_19080001 chrX_19080001 RAL-321 3574 chrX 19080314 19080351 chrX 19080430 19080477 20 122 5.5 3.0 4.2 3.8 163 chrX 19080314 intergenic not near genes chrX 19080396 intergenic not near genes chrX 19080477 intergenic not near genes chrX_20_19080001 chrX_19080001 RAL-321 3575 chrX 19098751 19098782 chrX 19098849 19098880 12 98 3.5 6.0 4.8 2.1 129 chrX 19098751 intergenic not near genes chrX 19098816 intergenic not near genes chrX 19098880 intergenic not near genes chrX_12_19095001 chrX_19095001 RAL-321 3576 chrX 19109113 19109138 chrX 19109298 19109342 12 200 0.0 4.5 2.2 3.8 229 chrX 19109113 intergenic not near genes chrX 19109228 intergenic not near genes chrX 19109342 intergenic not near genes chrX_12_19105001 chrX_19105001 RAL-321 3577 chrX 19110727 19110781 chrX 19110975 19111030 8 248 1.5 3.0 2.2 2.5 303 chrX 19110727 intergenic not near genes chrX 19110878 intergenic not near genes chrX 19111030 intergenic not near genes chrX_8_19110001 chrX_19110001 RAL-321 3578 chrX 19124420 19124460 chrX 19124522 19124569 11 105 2.0 1.5 1.8 3.9 149 chrX 19124420 intergenic CG15882 - chrX 19124494 intergenic CG15882 - chrX 19124569 intergenic CG15882 -,tgy - chrX_11_19120001 chrX_19120001 RAL-321 3579 chrX 19136532 19136583 chrX 19143472 19143522 412 16 6937 3.5 5.0 4.2 3.1 6990 chrX 19136532 intergenic not near genes chrX 19140027 intergenic not near genes chrX 19143522 3` UTR RhoGAP18B - chrX_16_19140001 chrX_19140001 RAL-321 3580 chrX 19181996 19182039 chrX 19182128 19182171 14 132 4.0 4.5 4.2 2.7 175 chrX 19181996 3` UTR CG7453 + chrX 19182084 intergenic CG7453 + chrX 19182171 intergenic CG7453 + chrX_14_19180001 chrX_19180001 RAL-321 3581 chrX 19285075 19285107 chrX 19285331 19285358 10 255 7.5 5.0 6.2 1.4 283 chrX 19285075 intron CG8034 - chrX 19285216 intron CG8034 - chrX 19285358 intron CG8034 - chrX_10_19285001 chrX_19285001 RAL-321 3582 chrX 19320206 19320254 chrX 19320314 19320362 23 107 5.5 5.0 5.2 3.7 156 chrX 19320206 intron out - chrX 19320284 intron out - chrX 19320362 intron out - chrX_23_19320001 chrX_19320001 RAL-321 3583 chrX 19330439 19330463 chrX 19330579 19330603 11 140 10.5 7.0 8.8 1.1 164 chrX 19330439 intron nAChRalpha7 - chrX 19330521 intron nAChRalpha7 - chrX 19330603 intron nAChRalpha7 - chrX_11_19330001 chrX_19330001 RAL-321 3584 chrX 19339731 19339773 chrX 19339827 19339869 14 96 0.5 7.5 4.0 2.8 138 chrX 19339731 intron nAChRalpha7 - chrX 19339800 intron nAChRalpha7 - chrX 19339869 intron nAChRalpha7 - chrX_14_19335001 chrX_19335001 RAL-321 3585 chrX 19356970 19357022 chrX 19358431 19358501 NOF 16 1464 4.0 0.5 2.2 5.0 1531 chrX 19356970 intron kek5 + chrX 19357736 intron kek5 + chrX 19358501 intron kek5 + chrX_16_19355001 chrX_19355001 RAL-321 3586 chrX 19380139 19380184 chrX 19380400 19380445 pogo 18 260 4.0 3.0 3.5 4.0 306 chrX 19380139 intron kek5 + chrX 19380292 intron kek5 + chrX 19380445 intron kek5 + chrX_18_19380001 chrX_19380001 RAL-321 3587 chrX 16983076 16983077 chrX 19404963 19404965 6 2421888 13.0 11.0 12.0 0.5 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_6_18190001 chrX_18190001 RAL-321 3588 chrX 19457646 19457684 chrX 19457749 19457787 4 99 6.5 5.5 6.0 0.6 141 chrX 19457646 intron kek5 + chrX 19457716 intron kek5 + chrX 19457787 intron kek5 + chrX_4_19455001 chrX_19455001 RAL-321 3589 chrX 19472003 19472008 chrX 19472105 19472110 4 102 11.0 0.5 5.8 0.6 107 chrX 19472003 intergenic kek5 + chrX 19472056 intergenic kek5 + chrX 19472110 intergenic kek5 + chrX_4_19470001 chrX_19470001 RAL-321 3590 chrX 19472010 19472053 chrX 19472102 19472155 16 100 3.0 0.5 1.8 5.7 145 chrX 19472010 intergenic kek5 + chrX 19472082 intergenic kek5 + chrX 19472155 intergenic kek5 + chrX_16_19470001 chrX_19470001 RAL-321 3591 chrX 19472110 19472157 chrX 19472689 19472692 jockey 16 580 0.0 5.0 2.5 4.6 582 chrX 19472110 intergenic kek5 + chrX 19472401 intergenic kek5 + chrX 19472692 intergenic not near genes chrX_16_19470001 chrX_19470001 RAL-321 3592 chrX 19530057 19530110 chrX 19530155 19530210 23 95 2.5 4.5 3.5 5.1 153 chrX 19530057 3` UTR CoRest + chrX 19530134 3` UTR CoRest + chrX 19530210 3` UTR CoRest + chrX_23_19530001 chrX_19530001 RAL-321 3593 chrX 19531924 19531956 chrX 19532036 19532069 18 113 9.5 7.5 8.5 1.9 145 chrX 19531924 3` UTR CG32532 - chrX 19531996 3` UTR CG32532 - chrX 19532069 3` UTR CG32532 - chrX_18_19530001 chrX_19530001 RAL-321 3594 chrX 19541413 19541448 chrX 19541513 19541548 13 100 2.5 4.0 3.2 3.1 135 chrX 19541413 intron CG32532 - chrX 19541480 intron CG32532 - chrX 19541548 intron CG32532 - chrX_13_19540001 chrX_19540001 RAL-321 3595 chrX 19553483 19553503 chrX 19553579 19553599 4 96 2.5 7.0 4.8 0.7 116 chrX 19553483 intergenic not near genes chrX 19553541 intergenic not near genes chrX 19553599 intergenic not near genes chrX_4_19550001 chrX_19550001 RAL-321 3596 chrX 19593938 19593975 chrX 19594043 19594080 11 105 4.5 7.0 5.8 1.6 142 chrX 19593938 exon CG14205 + chrX 19594009 intron CG14205 + chrX 19594080 exon CG14205 + chrX_11_19590001 chrX_19590001 RAL-321 3597 chrX 19689396 19689439 chrX 19689494 19689506 25 97 5.5 8.0 6.8 3.2 110 chrX 19689396 intergenic Mer -,CG14227 - chrX 19689451 intergenic Mer - chrX 19689506 intergenic Mer - chrX_25_19685001 chrX_19685001 RAL-321 3598 chrX 19693735 19693771 chrX 19693840 19693876 15 105 7.5 0.0 3.8 3.1 141 chrX 19693735 intergenic Mer -,CG14229 - chrX 19693806 intergenic CG14229 -,Mer - chrX 19693876 intergenic CG14229 -,Mer - chrX_15_19690001 chrX_19690001 RAL-321 3599 chrX 19710053 19710104 chrX 19711859 19711910 S-element 17 1804 3.5 8.5 6.0 2.4 1857 chrX 19710053 intron meso18E - chrX 19710982 intron meso18E - chrX 19711910 intron meso18E - chrX_17_19710001 chrX_19710001 RAL-321 3600 chrX 19754549 19754577 chrX 19754646 19754674 4 97 3.5 7.5 5.5 0.6 125 chrX 19754549 intron Pmp70 + chrX 19754612 intron Pmp70 + chrX 19754674 intron Pmp70 + chrX_4_19750001 chrX_19750001 RAL-321 3601 chrX 19762566 19762601 chrX 19762666 19762701 16 100 8.5 3.0 5.8 2.4 135 chrX 19762566 5` UTR CG12702 - chrX 19762634 5` UTR CG12702 - chrX 19762701 5` UTR CG12702 - chrX_16_19760001 chrX_19760001 RAL-321 3602 chrX 19791258 19791279 chrX 19791357 19791393 6 112 4.5 6.5 5.5 0.9 135 chrX 19791258 intergenic not near genes chrX 19791326 intergenic not near genes chrX 19791393 intergenic not near genes chrX_6_19790001 chrX_19790001 RAL-321 3603 chrX 19797330 19797340 chrX 19804663 19804670 Stalker4 4 7332 14.0 7.0 10.5 0.3 7340 chrX 19797330 intergenic not near genes chrX 19801000 intergenic not near genes chrX 19804670 intergenic not near genes chrX_4_19800001 chrX_19800001 RAL-321 3604 chrX 19881440 19881457 chrX 19881539 19881558 9 101 12.0 6.5 9.2 0.9 118 chrX 19881440 intron Hers + chrX 19881499 intron Hers + chrX 19881558 intron Hers + chrX_9_19880001 chrX_19880001 RAL-321 3605 chrX 19881460 19881485 chrX 19881535 19881586 10 98 6.0 6.0 6.0 1.4 126 chrX 19881460 intron Hers + chrX 19881523 intron Hers + chrX 19881586 intron Hers + chrX_10_19880001 chrX_19880001 RAL-321 3606 chrX 19897364 19897416 chrX 19897461 19897513 24 95 9.0 7.0 8.0 2.7 149 chrX 19897364 intron Hers + chrX 19897438 intron Hers + chrX 19897513 intron Hers + chrX_24_19895001 chrX_19895001 RAL-321 3607 chrX 19978139 19978170 chrX 19978247 19978272 11 106 5.0 8.5 6.8 1.4 133 chrX 19978139 intergenic not near genes chrX 19978206 intergenic not near genes chrX 19978272 intergenic not near genes chrX_11_19975001 chrX_19975001 RAL-321 3608 chrX 19983846 19983894 chrX 19983946 19983994 19 99 0.0 4.0 2.0 6.3 148 chrX 19983846 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983994 intergenic not near genes chrX_19_19980001 chrX_19980001 RAL-321 3609 chrX 20041520 20041562 chrX 20041620 20041662 16 100 3.5 1.5 2.5 4.6 142 chrX 20041520 intron Dop2R - chrX 20041591 intron Dop2R - chrX 20041662 intron Dop2R - chrX_16_20040001 chrX_20040001 RAL-321 3610 chrX 20069247 20069288 chrX 20069400 20069440 10 152 4.5 4.5 4.5 1.8 193 chrX 20069247 intergenic not near genes chrX 20069344 intergenic not near genes chrX 20069440 intergenic not near genes chrX_10_20065001 chrX_20065001 RAL-321 3611 chrX 20105195 20105216 chrX 20105289 20105306 4 95 26.5 41.5 34.0 0.1 111 chrX 20105195 intergenic not near genes chrX 20105250 intergenic not near genes chrX 20105306 intergenic not near genes chrX_4_20105001 chrX_20105001 RAL-321 3612 chrX 20125375 20125398 chrX 20125477 20125500 12 102 5.0 7.0 6.0 1.7 125 chrX 20125375 intergenic CG34331 + chrX 20125438 intergenic CG34331 + chrX 20125500 intergenic CG34331 + chrX_12_20125001 chrX_20125001 RAL-321 3613 chrX 20144292 20144311 chrX 20144392 20144411 7 98 5.0 9.5 7.2 0.9 119 chrX 20144292 intergenic not near genes chrX 20144352 intergenic not near genes chrX 20144411 intergenic not near genes chrX_7_20140001 chrX_20140001 RAL-321 3614 chrX 20269919 20269952 chrX 20270021 20270054 13 102 6.5 5.5 6.0 1.9 135 chrX 20269919 intergenic Inx6 - chrX 20269986 intergenic Inx6 - chrX 20270054 intergenic Inx6 - chrX_13_20265001 chrX_20265001 RAL-321 3615 chrX 20271510 20271525 chrX 20271622 20271637 9 111 4.0 0.0 2.0 3.0 127 chrX 20271510 intergenic not near genes chrX 20271574 intergenic not near genes chrX 20271637 intergenic not near genes chrX_9_20270001 chrX_20270001 RAL-321 3616 chrX 20312864 20312911 chrX 20312962 20313009 24 97 3.5 7.5 5.5 3.7 145 chrX 20312864 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313009 intron CG1504 - chrX_24_20310001 chrX_20310001 RAL-321 3617 chrX 20320280 20320305 chrX 20320377 20320401 14 96 8.5 4.0 6.2 1.9 121 chrX 20320280 intron CG1504 - chrX 20320340 intron CG1504 - chrX 20320401 intron CG1504 - chrX_14_20320001 chrX_20320001 RAL-321 3618 chrX 20374110 20374128 chrX 20374206 20374208 4 90 0.5 9.0 4.8 0.7 98 chrX 20374110 intergenic not near genes chrX 20374159 intergenic not near genes chrX 20374208 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-321 3619 chrX 20377325 20377336 chrX 20378812 20378813 hobo 4 1483 3.0 7.0 5.0 0.7 1488 chrX 20377325 intergenic not near genes chrX 20378069 intergenic not near genes chrX 20378813 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-321 3620 chrX 20383298 20383344 chrX 20383442 20383488 19 143 3.0 6.0 4.5 3.5 190 chrX 20383298 intergenic not near genes chrX 20383393 intergenic not near genes chrX 20383488 intergenic not near genes chrX_19_20380001 chrX_20380001 RAL-321 3621 chrX 20383856 20383909 chrX 20383956 20384009 10 98 1.5 3.0 2.2 3.1 153 chrX 20383856 intergenic not near genes chrX 20383932 intergenic not near genes chrX 20384009 intergenic not near genes chrX_10_20380001 chrX_20380001 RAL-321 3622 chrX 20384192 20384221 chrX 20384314 20384353 8 130 0.0 3.0 1.5 3.2 161 chrX 20384192 intergenic not near genes chrX 20384272 intergenic not near genes chrX 20384353 intergenic not near genes chrX_8_20380001 chrX_20380001 RAL-321 3623 chrX 20415066 20415080 chrX 20415152 20415190 5 105 0.0 0.0 0.0 5.0 124 chrX 20415066 intergenic not near genes chrX 20415128 intergenic not near genes chrX 20415190 intergenic not near genes chrX_5_20415001 chrX_20415001 RAL-321 3624 chrX 20427123 20427137 chrX 20427270 20427284 7 147 50.5 43.5 47.0 0.1 161 chrX 20427123 intergenic CG15456 -,CG11710 - chrX 20427204 intergenic CG15456 -,CG11710 - chrX 20427284 intergenic CG11710 -,CG15456 - chrX_7_20425001 chrX_20425001 RAL-321 3625 chrX 20426179 20426202 chrX 20428369 20428406 9 2191 55.5 50.0 52.8 0.2 2227 chrX 20426179 exon cactin + chrX 20427292 intergenic CG11710 -,CG15456 - chrX 20428406 exon CG11710 - chrX_9_20425001 chrX_20425001 RAL-321 3626 chrX 20443161 20443204 chrX 20443257 20443300 13 96 6.0 9.5 7.8 1.5 139 chrX 20443161 exon CG1695 + chrX 20443230 intron CG1695 + chrX 20443300 intron CG1695 + chrX_13_20440001 chrX_20440001 RAL-321 3627 chrX 20468003 20468028 chrX 20468107 20468137 7 108 4.0 0.0 2.0 2.3 134 chrX 20468003 intron GstT3 + chrX 20468070 intron GstT3 + chrX 20468137 intron GstT3 + chrX_7_20465001 chrX_20465001 RAL-321 3628 chrX 20493912 20493928 chrX 20494093 20494109 8 181 0.0 11.0 5.5 1.2 197 chrX 20493912 intron RhoGAP19D - chrX 20494010 intron RhoGAP19D - chrX 20494109 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 RAL-321 3629 chrX 20503083 20503123 chrX 20503187 20503208 18 100 4.0 7.0 5.5 2.8 125 chrX 20503083 intron RhoGAP19D - chrX 20503146 intron RhoGAP19D - chrX 20503208 intron RhoGAP19D - chrX_18_20500001 chrX_20500001 RAL-321 3630 chrX 20528583 20528633 chrX 20528951 20529001 23 367 4.0 6.0 5.0 3.8 418 chrX 20528583 intergenic not near genes chrX 20528792 intergenic not near genes chrX 20529001 intergenic not near genes chrX_23_20525001 chrX_20525001 RAL-321 3631 chrX 20559109 20559163 chrX 20559217 20559271 20 108 0.0 3.5 1.8 7.1 162 chrX 20559109 intron RunxB + chrX 20559190 intron RunxB + chrX 20559271 intron RunxB + chrX_20_20555001 chrX_20555001 RAL-321 3632 chrX 20594289 20594328 chrX 20594395 20594404 10 101 4.5 4.5 4.5 1.8 115 chrX 20594289 intron RunxA - chrX 20594346 intron RunxA - chrX 20594404 intron RunxA - chrX_10_20590001 chrX_20590001 RAL-321 3633 chrX 20615124 20615137 chrX 20615229 20615242 7 105 5.5 0.0 2.8 1.8 118 chrX 20615124 intron RunxA - chrX 20615183 intron RunxA - chrX 20615242 intron RunxA - chrX_7_20615001 chrX_20615001 RAL-321 3634 chrX 20635423 20635444 chrX 20635609 20635630 9 186 5.0 7.5 6.2 1.2 207 chrX 20635423 intergenic not near genes chrX 20635526 intergenic not near genes chrX 20635630 intergenic not near genes chrX_9_20635001 chrX_20635001 RAL-321 3635 chrX 20710413 20710438 chrX 20710511 20710536 13 98 3.0 6.5 4.8 2.2 123 chrX 20710413 intergenic not near genes chrX 20710474 intergenic not near genes chrX 20710536 intergenic not near genes chrX_13_20710001 chrX_20710001 RAL-321 3636 chrX 20749037 20749077 chrX 20749149 20749155 5 105 0.0 7.0 3.5 1.1 118 chrX 20749037 intergenic not near genes chrX 20749096 intergenic not near genes chrX 20749155 intergenic not near genes chrX_5_20745001 chrX_20745001 RAL-321 3637 chrX 20780209 20780237 chrX 20780454 20780482 14 244 5.5 4.5 5.0 2.3 273 chrX 20780209 intron,3` UTR shakB -,CG32507 - chrX 20780346 intron,3` UTR shakB -,CG32507 - chrX 20780482 intron,3` UTR shakB -,CG32507 - chrX_14_20780001 chrX_20780001 RAL-321 3638 chrX 20791537 20791813 chrX 20791657 20791909 10 118 2.5 3.0 2.8 2.6 372 chrX 20791537 intron shakB - chrX 20791723 intron shakB - chrX 20791909 intron shakB - chrX_10_20790001 chrX_20790001 RAL-321 3639 chrX 20810700 20810708 chrX 20810798 20810806 4 98 13.0 6.0 9.5 0.4 106 chrX 20810700 intron shakB - chrX 20810753 intron shakB - chrX 20810806 intron shakB - chrX_4_20810001 chrX_20810001 RAL-321 3640 chrX 20915027 20915071 chrX 20915218 20915262 17 191 5.0 3.5 4.2 3.3 235 chrX 20915027 intron shakB - chrX 20915144 intron shakB - chrX 20915262 intron shakB - chrX_17_20915001 chrX_20915001 RAL-321 3641 chrX 20940700 20940747 chrX 20942189 20942224 hobo 18 1488 6.5 2.0 4.2 3.5 1524 chrX 20940700 intergenic not near genes chrX 20941462 intergenic not near genes chrX 20942224 intergenic not near genes chrX_18_20940001 chrX_20940001 RAL-321 3642 chrX 20956980 20957011 chrX 20962437 20962472 I-element 13 5461 1.0 9.0 5.0 2.2 5492 chrX 20956980 intergenic not near genes chrX 20959726 intergenic not near genes chrX 20962472 intergenic Ser6 - chrX_13_20955001 chrX_20955001 RAL-321 3643 chrX 21022255 21022273 chrX 21022444 21022452 5 187 19.0 11.0 15.0 0.3 197 chrX 21022255 intergenic not near genes chrX 21022354 intergenic not near genes chrX 21022452 intergenic not near genes chrX_5_21020001 chrX_21020001 RAL-321 3644 chrX 21029180 21029180 chrX 21029374 21029412 5 214 0.5 5.0 2.8 1.3 232 chrX 21029180 3` UTR CG1529 - chrX 21029296 3` UTR CG1529 - chrX 21029412 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 RAL-321 3645 chrX 21029786 21029812 chrX 21029947 21029973 14 161 3.0 5.0 4.0 2.8 187 chrX 21029786 3` UTR CG1529 - chrX 21029880 3` UTR CG1529 - chrX 21029973 3` UTR CG1529 - chrX_14_21025001 chrX_21025001 RAL-321 3646 chrX 21049234 21049251 chrX 21049334 21049351 6 100 3.5 4.0 3.8 1.2 117 chrX 21049234 intergenic Cbs + chrX 21049292 intergenic Cbs + chrX 21049351 intergenic Cbs + chrX_6_21045001 chrX_21045001 RAL-321 3647 chrX 21049738 21049749 chrX 21049842 21049853 5 104 2.0 9.5 5.8 0.7 115 chrX 21049738 intergenic CG1518 - chrX 21049796 intergenic CG1518 - chrX 21049853 intergenic CG1518 - chrX_5_21045001 chrX_21045001 RAL-321 3648 chrX 21055672 21055725 chrX 21055768 21055821 15 96 3.5 3.5 3.5 3.3 149 chrX 21055672 intron bves + chrX 21055746 intron bves + chrX 21055821 intron bves + chrX_15_21055001 chrX_21055001 RAL-321 3649 chrX 21061858 21061897 chrX 21062364 21062403 roo 18 506 4.0 9.0 6.5 2.4 545 chrX 21061858 intron bves + chrX 21062130 intron bves + chrX 21062403 intron,3` UTR bves +,CG32512 - chrX_18_21060001 chrX_21060001 RAL-321 3650 chrX 21076306 21076358 chrX 21076405 21076457 23 97 5.5 0.0 2.8 6.1 151 chrX 21076306 intron bves + chrX 21076382 intron bves + chrX 21076457 intron bves + chrX_23_21075001 chrX_21075001 RAL-321 3651 chrX 21086117 21086125 chrX 21087166 21087174 jockey 7 1049 10.5 6.5 8.5 0.7 1057 chrX 21086117 intergenic not near genes chrX 21086646 intergenic not near genes chrX 21087174 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-321 3652 chrX 21086126 21086161 chrX 21087165 21087210 jockey 18 1046 4.0 6.0 5.0 3.0 1084 chrX 21086126 intergenic not near genes chrX 21086668 intergenic not near genes chrX 21087210 intergenic not near genes chrX_18_21085001 chrX_21085001 RAL-321 3653 chrX 21190566 21190825 chrX 21190742 21190910 7 109 1.5 0.0 0.8 3.9 344 chrX 21190566 intergenic not near genes chrX 21190738 intergenic not near genes chrX 21190910 intergenic not near genes chrX_7_21190001 chrX_21190001 RAL-321 3654 chrX 21222650 21222654 chrX 21222742 21222751 4 94 7.0 2.5 4.8 0.7 101 chrX 21222650 intron CG32521 - chrX 21222700 intron CG32521 - chrX 21222751 intron CG32521 - chrX_4_21220001 chrX_21220001 RAL-321 3655 chrX 21328100 21328137 chrX 21328231 21328268 14 131 5.5 4.0 4.8 2.4 168 chrX 21328100 3` UTR CG1486 + chrX 21328184 intergenic CG1486 +,tty - chrX 21328268 intergenic CG1486 +,tty - chrX_14_21325001 chrX_21325001 RAL-321 3656 chrX 21334322 21334363 chrX 21334441 21334488 14 124 7.5 5.0 6.2 1.9 166 chrX 21334322 intron tty - chrX 21334405 intron tty - chrX 21334488 intron tty - chrX_14_21330001 chrX_21330001 RAL-321 3657 chrX 21449245 21449260 chrX 21449353 21449366 5 111 8.0 8.5 8.2 0.5 121 chrX 21449245 intron CG42343 - chrX 21449306 intron CG42343 - chrX 21449366 intron CG42343 - chrX_5_21445001 chrX_21445001 RAL-321 3658 chrX 21454848 21454871 chrX 21454952 21454975 6 104 4.0 9.0 6.5 0.8 127 chrX 21454848 intron CG42343 - chrX 21454912 intron CG42343 - chrX 21454975 intron CG42343 - chrX_6_21450001 chrX_21450001 RAL-321 3659 chrX 21455200 21455241 chrX 21455399 21455448 5 204 1.5 0.0 0.8 2.8 248 chrX 21455200 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455448 intron CG42343 - chrX_5_21455001 chrX_21455001 RAL-321 3660 chrX 21458693 21458724 chrX 21464149 21464154 Ivk 12 5454 1.5 10.0 5.8 1.8 5461 chrX 21458693 intergenic not near genes chrX 21461424 intergenic not near genes chrX 21464154 intergenic not near genes chrX_12_21460001 chrX_21460001 RAL-321 3661 chrX 21464929 21464965 chrX 21465028 21465064 13 98 2.0 2.5 2.2 4.1 135 chrX 21464929 intergenic not near genes chrX 21464996 intergenic not near genes chrX 21465064 intergenic not near genes chrX_13_21460001 chrX_21460001 RAL-321 3662 chrX 21466996 21467039 chrX 21467100 21467143 18 104 2.0 3.5 2.8 4.7 147 chrX 21466996 intergenic CR45507 - chrX 21467070 intergenic CR45507 - chrX 21467143 3` UTR CR45507 - chrX_18_21465001 chrX_21465001 RAL-321 3663 chrX 21474385 21474435 chrX 21474771 21474821 1731 15 384 2.0 5.5 3.8 3.1 436 chrX 21474385 intergenic not near genes chrX 21474603 intergenic not near genes chrX 21474821 intergenic not near genes chrX_15_21470001 chrX_21470001 RAL-321 3664 chrX 21509991 21509999 chrX 21510100 21510108 5 109 0.0 10.5 5.2 0.8 117 chrX 21509991 intron CR45082 - chrX 21510050 intron CR45082 - chrX 21510108 intron CR45082 - chrX_5_21510001 chrX_21510001 RAL-321 3665 chrX 21516969 21517014 chrX 21517068 21517112 11 96 6.5 7.0 6.8 1.4 143 chrX 21516969 intron CR45082 - chrX 21517040 intron CR45082 - chrX 21517112 intron CR45082 - chrX_11_21515001 chrX_21515001 RAL-321 3666 chrX 21565396 21565439 chrX 21565494 21565537 13 98 4.5 4.5 4.5 2.4 141 chrX 21565396 intergenic not near genes chrX 21565466 intergenic not near genes chrX 21565537 intergenic not near genes chrX_13_21565001 chrX_21565001 RAL-321 3667 chrX 21567937 21567948 chrX 21568038 21568043 4 99 14.0 2.5 8.2 0.4 106 chrX 21567937 intergenic not near genes chrX 21567990 intergenic not near genes chrX 21568043 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-321 3668 chrX 21581536 21581573 chrX 21581637 21581674 17 100 3.0 0.5 1.8 6.1 138 chrX 21581536 intergenic not near genes chrX 21581605 intergenic not near genes chrX 21581674 intergenic not near genes chrX_17_21580001 chrX_21580001 RAL-321 3669 chrX 21668251 21668290 chrX 21668353 21668395 14 104 28.0 22.0 25.0 0.5 144 chrX 21668251 intergenic not near genes chrX 21668323 intergenic not near genes chrX 21668395 intergenic not near genes chrX_14_21665001 chrX_21665001 RAL-321 3670 chrX 21961001 21961039 chrX 21961129 21961167 10 128 26.0 22.5 24.2 0.4 166 chrX 21961001 intergenic not near genes chrX 21961084 intergenic not near genes chrX 21961167 intergenic not near genes chrX_10_21960001 chrX_21960001 RAL-321 3671 chrX 22259784 22259790 chrX 22260225 22260231 rover 5 441 153.0 18.5 85.8 0.1 447 chrX 22259784 intergenic not near genes chrX 22260008 intergenic not near genes chrX 22260231 intergenic not near genes chrX_5_22260001 chrX_22260001 RAL-321 3672 chrX 22448253 22448295 chrX 22448412 22448454 9 159 6.0 6.5 6.2 1.2 201 chrX 22448253 intron CG14615 - chrX 22448354 intron CG14615 - chrX 22448454 intron CG14615 - chrX_9_22445001 chrX_22445001 RAL-321 3673 chrX 22478878 22478890 chrX 22479031 22479043 7 153 0.0 9.0 4.5 1.3 165 chrX 22478878 intron CG12576 - chrX 22478960 intron CG12576 - chrX 22479043 intron CG12576 - chrX_7_22475001 chrX_22475001 RAL-321 3674 chrX 22504670 22504720 chrX 22504787 22504821 13 114 0.0 5.0 2.5 3.7 151 chrX 22504670 intron l(1)G0196 + chrX 22504746 intron l(1)G0196 + chrX 22504821 intron l(1)G0196 + chrX_13_22500001 chrX_22500001 RAL-321 3675 chrX 22506970 22507010 chrX 22507070 22507115 14 104 5.0 3.0 4.0 2.8 145 chrX 22506970 intron l(1)G0196 + chrX 22507042 intron l(1)G0196 + chrX 22507115 exon l(1)G0196 + chrX_14_22505001 chrX_22505001 RAL-321 3676 chrX 22509305 22509310 chrX 22509403 22509408 5 98 0.0 5.5 2.8 1.3 103 chrX 22509305 intergenic not near genes chrX 22509356 intergenic not near genes chrX 22509408 intergenic not near genes chrX_5_22505001 chrX_22505001 RAL-321 3677 chrX 22642554 22642603 chrX 22642658 22642714 9 110 3.5 5.5 4.5 1.6 160 chrX 22642554 intergenic not near genes chrX 22642634 intergenic not near genes chrX 22642714 intergenic not near genes chrX_9_22640001 chrX_22640001 RAL-321 3678 chrX 22697478 22697516 chrX 22701795 22701833 Juan 12 4317 8.5 9.5 9.0 1.2 4355 chrX 22697478 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701833 intron CR44997 + chrX_12_22695001 chrX_22695001 RAL-321 3679 chrX 22764359 22764396 chrX 22764475 22764512 11 116 4.5 6.0 5.2 1.8 153 chrX 22764359 intron CR44997 + chrX 22764436 intron CR44997 + chrX 22764512 intron CR44997 + chrX_11_22760001 chrX_22760001 RAL-321 3680 chrX 22771486 22771537 chrX 22774797 22774848 297 14 3310 3.0 6.0 4.5 2.5 3362 chrX 22771486 intron CR44997 + chrX 22773167 intron CR44997 + chrX 22774848 intron CR44997 + chrX_14_22770001 chrX_22770001 RAL-321 3681 chrX 22798757 22798801 chrX 22798894 22798938 12 137 2.0 4.5 3.2 2.9 181 chrX 22798757 intergenic not near genes chrX 22798848 intergenic not near genes chrX 22798938 intergenic not near genes chrX_12_22795001 chrX_22795001 RAL-321 3682 chrX 22811977 22812004 chrX 22816770 22816797 F-element 12 4792 8.0 5.5 6.8 1.5 4820 chrX 22811977 intergenic CG12446 - chrX 22814387 intergenic not near genes chrX 22816797 intergenic not near genes chrX_12_22810001 chrX_22810001 RAL-321 3683 chrX 22824218 22824445 chrX 22824364 22824598 26 148 5.5 5.5 5.5 4.0 380 chrX 22824218 intergenic fog - chrX 22824408 3` UTR fog - chrX 22824598 3` UTR fog - chrX_26_22820001 chrX_22820001 RAL-321 3684 chrX 22898842 22898864 chrX 22899259 22899289 6 418 10.0 0.0 5.0 1.0 447 chrX 22898842 intergenic not near genes chrX 22899066 intergenic not near genes chrX 22899289 intergenic not near genes chrX_6_22895001 chrX_22895001 RAL-321 3685 chrX 22916184 22916206 chrX 22916337 22916362 7 155 0.0 6.5 3.2 1.7 178 chrX 22916184 intergenic not near genes chrX 22916273 intergenic not near genes chrX 22916362 intergenic not near genes chrX_7_22915001 chrX_22915001 RAL-321 3686 chrX 22922505 22922547 chrX 22922605 22922642 16 98 7.5 6.5 7.0 2.0 137 chrX 22922505 intergenic not near genes chrX 22922574 intergenic not near genes chrX 22922642 intergenic not near genes chrX_16_22920001 chrX_22920001 RAL-321 3687 chrX 22967372 22967388 chrX 23154543 23154559 diver 4 187171 11.0 17.5 14.2 0.3 187187 chrX 22967372 intergenic not near genes chrX 23060966 intergenic not near genes chrX 23154559 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-321 3688 chrX 22987098 22987107 chrX 22989777 22989786 Burdock 6 2679 8.0 6.0 7.0 0.8 2688 chrX 22987098 intron,intron stnA -,stnB - chrX 22988442 intron,intron stnA -,stnB - chrX 22989786 intron,intron stnA -,stnB - chrX_6_22985001 chrX_22985001 RAL-321 3689 chrX 22987113 22987131 chrX 22989776 22989810 Burdock 7 2674 6.0 6.0 6.0 1.0 2697 chrX 22987113 intron,intron stnA -,stnB - chrX 22988462 intron,intron stnA -,stnB - chrX 22989810 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-321 3690 chrX 22996291 22996338 chrX 23003545 23003592 roo 23 7253 3.0 7.0 5.0 3.8 7301 chrX 22996291 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003592 intron,intron stnA -,stnB - chrX_23_22995001 chrX_22995001 RAL-321 3691 chrY 864699 864741 chrY 864796 864837 4 97 36.5 37.0 36.8 0.1 138 chrY 864699 intergenic not near genes chrY 864768 intergenic not near genes chrY 864837 intergenic not near genes chrY_4_860001 chrY_860001 RAL-321 3692 chrY 975592 975641 chrY 975729 975754 5 239 163.5 166.0 164.8 0.0 162 chrY 975592 intergenic not near genes chrY 975673 intergenic not near genes chrY 975754 intergenic not near genes chrY_5_975001 chrY_975001 RAL-321 3693 chrY 975793 975819 chrY 975879 976004 12 109 134.5 181.5 158.0 0.1 211 chrY 975793 intergenic not near genes chrY 975898 intergenic not near genes chrY 976004 intergenic not near genes chrY_12_975001 chrY_975001 RAL-321 3694 chrY 1419887 1419908 chrY 1420161 1420176 7 273 24.5 18.5 21.5 0.3 289 chrY 1419887 intergenic not near genes chrY 1420032 intergenic not near genes chrY 1420176 intergenic not near genes chrY_7_1420001 chrY_1420001 RAL-321 3695 chrY 1420499 1420695 chrY 1420759 1420798 7 143 14.0 18.0 16.0 0.4 299 chrY 1420499 intergenic not near genes chrY 1420648 intergenic not near genes chrY 1420798 intergenic not near genes chrY_7_1420001 chrY_1420001 RAL-321 3696 chrY 3561995 3562025 chrY 3562098 3562128 6 103 9.5 10.5 10.0 0.5 133 chrY 3561995 intergenic not near genes chrY 3562062 intergenic not near genes chrY 3562128 intergenic not near genes chrY_6_3560001 chrY_3560001 RAL-321 3697 chrY 3664982 3665018 chrY 3665106 3665142 7 123 0.5 1.0 0.8 3.9 160 chrY 3664982 intergenic CG40948 + chrY 3665062 intergenic not near genes chrY 3665142 intergenic not near genes chrY_7_3665001 chrY_3665001 RAL-321 3698 chrY 3666419 3666460 chrY 3666592 3666633 4 173 0.5 1.5 1.0 2.0 214 chrY 3666419 intergenic not near genes chrY 3666526 intergenic not near genes chrY 3666633 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-321