SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 12957 12970 chr2L 13281 13294 6 324 33.5 37.0 35.2 0.2 337 chr2L 12957 intron l(2)gl - chr2L 13126 intron l(2)gl - chr2L 13294 intron l(2)gl - chr2L_6_10001 chr2L_10001 RAL-320 2 chr2L 12947 12994 chr2L 13296 13318 6 329 42.0 33.0 37.5 0.2 371 chr2L 12947 intron l(2)gl - chr2L 13132 intron l(2)gl - chr2L 13318 intron l(2)gl - chr2L_6_10001 chr2L_10001 RAL-320 3 chr2L 46330 46383 chr2L 46427 46460 12 94 1.5 1.5 1.5 4.8 130 chr2L 46330 intron Cda5 - chr2L 46395 intron Cda5 - chr2L 46460 intron Cda5 - chr2L_12_45001 chr2L_45001 RAL-320 4 chr2L 47459 47488 chr2L 52570 52613 jockey 10 5119 8.0 6.5 7.2 1.2 5154 chr2L 47459 intron Cda5 - chr2L 50036 intron Cda5 - chr2L 52613 intron Cda5 - chr2L_10_50001 chr2L_50001 RAL-320 5 chr2L 172010 172047 chr2L 172140 172177 5 130 2.0 4.0 3.0 1.2 167 chr2L 172010 intron spen + chr2L 172094 intron spen + chr2L 172177 intron spen + chr2L_5_170001 chr2L_170001 RAL-320 6 chr2L 297667 297711 chr2L 297786 297821 10 119 7.0 2.0 4.5 1.8 154 chr2L 297667 intergenic Pi3K21B +,Hop + chr2L 297744 intergenic Pi3K21B +,Hop + chr2L 297821 intergenic Pi3K21B +,Hop + chr2L_10_295001 chr2L_295001 RAL-320 7 chr2L 312808 312857 chr2L 312907 312930 14 90 2.5 6.5 4.5 2.5 122 chr2L 312808 intron Plc21C + chr2L 312869 intron Plc21C + chr2L 312930 intron Plc21C + chr2L_14_310001 chr2L_310001 RAL-320 8 chr2L 323436 323457 chr2L 323534 323555 5 96 8.5 3.0 5.8 0.7 119 chr2L 323436 intron Plc21C + chr2L 323496 intron Plc21C + chr2L 323555 intron Plc21C + chr2L_5_320001 chr2L_320001 RAL-320 9 chr2L 323458 323482 chr2L 323531 323580 10 82 5.0 3.0 4.0 2.0 122 chr2L 323458 intron Plc21C + chr2L 323519 intron Plc21C + chr2L 323580 intron Plc21C + chr2L_10_320001 chr2L_320001 RAL-320 10 chr2L 325126 325151 chr2L 325208 325243 10 90 6.5 6.5 6.5 1.3 117 chr2L 325126 intron Plc21C + chr2L 325184 intron Plc21C + chr2L 325243 intron Plc21C + chr2L_10_325001 chr2L_325001 RAL-320 11 chr2L 347880 347918 chr2L 355400 355432 blood 5 7519 2.5 3.5 3.0 1.2 7552 chr2L 347880 3` UTR Plc21C + chr2L 351656 intron Plc21C + chr2L 355432 3` UTR Plc21C + chr2L_5_350001 chr2L_350001 RAL-320 12 chr2L 371422 371458 chr2L 371521 371557 7 99 4.5 7.0 5.8 1.0 135 chr2L 371422 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371557 intergenic not near genes chr2L_7_370001 chr2L_370001 RAL-320 13 chr2L 458870 458923 chr2L 458967 459020 12 93 3.5 4.0 3.8 2.5 150 chr2L 458870 intergenic CG4297 -,CG4133 + chr2L 458945 3` UTR CG4297 - chr2L 459020 3` UTR CG4297 - chr2L_12_455001 chr2L_455001 RAL-320 14 chr2L 525232 525286 chr2L 525335 525389 15 101 4.0 3.5 3.8 3.1 157 chr2L 525232 intron ush + chr2L 525310 intron ush + chr2L 525389 intron ush + chr2L_15_525001 chr2L_525001 RAL-320 15 chr2L 544806 544856 chr2L 544909 544959 18 103 6.0 4.0 5.0 3.0 153 chr2L 544806 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544882 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544959 3` UTR Ets21C - chr2L_18_540001 chr2L_540001 RAL-320 16 chr2L 628479 628503 chr2L 628623 628631 8 142 7.0 4.0 5.5 1.2 152 chr2L 628479 intergenic CR45369 +,CG2839 + chr2L 628555 intergenic CR45369 +,CG2839 + chr2L 628631 intergenic CR45369 +,CG2839 + chr2L_8_625001 chr2L_625001 RAL-320 17 chr2L 628507 628526 chr2L 628621 628658 10 134 2.5 4.0 3.2 2.4 151 chr2L 628507 intergenic CR45369 +,CG2839 + chr2L 628582 intergenic CR45369 +,CG2839 + chr2L 628658 intergenic CR45369 +,CG2839 + chr2L_10_625001 chr2L_625001 RAL-320 18 chr2L 736857 736900 chr2L 736982 737015 16 123 5.0 4.5 4.8 2.8 158 chr2L 736857 intergenic Eaat2 - chr2L 736936 intergenic Eaat2 - chr2L 737015 intergenic Eaat2 - chr2L_16_735001 chr2L_735001 RAL-320 19 chr2L 763575 763629 chr2L 763671 763709 16 85 4.5 4.5 4.5 2.9 134 chr2L 763575 intergenic not near genes chr2L 763642 intergenic not near genes chr2L 763709 intergenic not near genes chr2L_16_760001 chr2L_760001 RAL-320 20 chr2L 769427 769433 chr2L 769513 769531 4 94 10.5 5.0 7.8 0.5 104 chr2L 769427 intergenic not near genes chr2L 769479 intergenic not near genes chr2L 769531 intergenic not near genes chr2L_4_765001 chr2L_765001 RAL-320 21 chr2L 769436 769464 chr2L 769509 769539 10 86 5.0 4.0 4.5 1.8 103 chr2L 769436 intergenic not near genes chr2L 769488 intergenic not near genes chr2L 769539 intergenic not near genes chr2L_10_765001 chr2L_765001 RAL-320 22 chr2L 791430 791474 chr2L 791544 791580 10 112 4.5 3.5 4.0 2.0 150 chr2L 791430 intergenic not near genes chr2L 791505 intergenic not near genes chr2L 791580 intergenic not near genes chr2L_10_790001 chr2L_790001 RAL-320 23 chr2L 849449 849481 chr2L 849560 849592 12 104 4.0 5.0 4.5 2.2 143 chr2L 849449 intron drongo - chr2L 849520 intron drongo - chr2L 849592 intron drongo - chr2L_12_845001 chr2L_845001 RAL-320 24 chr2L 877826 877878 chr2L 877927 877962 11 94 3.0 2.0 2.5 3.1 136 chr2L 877826 3` UTR,exon CG15824 -,ninaA + chr2L 877894 3` UTR,intron CG15824 -,ninaA + chr2L 877962 3` UTR,intron CG15824 -,ninaA + chr2L_11_875001 chr2L_875001 RAL-320 25 chr2L 922454 922490 chr2L 922555 922566 14 93 5.0 5.0 5.0 2.3 112 chr2L 922454 intergenic CG4341 + chr2L 922510 intergenic CG4341 + chr2L 922566 intergenic CG4341 + chr2L_14_920001 chr2L_920001 RAL-320 26 chr2L 931635 931656 chr2L 931733 931750 8 96 7.5 9.0 8.2 0.9 115 chr2L 931635 intron CG4341 + chr2L 931692 intron CG4341 + chr2L 931750 intron CG4341 + chr2L_8_930001 chr2L_930001 RAL-320 27 chr2L 931657 931661 chr2L 931711 931760 5 87 6.5 6.0 6.2 0.7 103 chr2L 931657 intron CG4341 + chr2L 931708 intron CG4341 + chr2L 931760 intron CG4341 + chr2L_5_930001 chr2L_930001 RAL-320 28 chr2L 938401 938455 chr2L 938572 938626 6 168 1.5 1.5 1.5 2.4 225 chr2L 938401 intron CG4341 + chr2L 938514 intron CG4341 + chr2L 938626 intron CG4341 + chr2L_6_935001 chr2L_935001 RAL-320 29 chr2L 976857 976910 chr2L 984513 984521 roo 15 7650 4.0 2.5 3.2 3.6 7664 chr2L 976857 intergenic not near genes chr2L 980689 intergenic not near genes chr2L 984521 intergenic not near genes chr2L_15_980001 chr2L_980001 RAL-320 30 chr2L 996702 996712 chr2L 1005817 1005827 roo 4 9114 3.5 3.0 3.2 1.0 9125 chr2L 996702 intergenic not near genes chr2L 1001264 intergenic not near genes chr2L 1005827 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-320 31 chr2L 1041340 1041382 chr2L 1041448 1041489 18 101 5.5 5.0 5.2 2.9 149 chr2L 1041340 intron IA-2 - chr2L 1041414 intron IA-2 - chr2L 1041489 intron IA-2 - chr2L_18_1040001 chr2L_1040001 RAL-320 32 chr2L 1042601 1042615 chr2L 1042698 1042711 6 97 3.5 0.0 1.8 2.1 110 chr2L 1042601 intron IA-2 - chr2L 1042656 intron IA-2 - chr2L 1042711 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-320 33 chr2L 1156875 1156894 chr2L 1157000 1157006 6 123 4.0 10.5 7.2 0.7 131 chr2L 1156875 intron capt - chr2L 1156940 intron capt - chr2L 1157006 intron capt - chr2L_6_1155001 chr2L_1155001 RAL-320 34 chr2L 1164232 1164282 chr2L 1164333 1164387 18 106 3.0 2.5 2.8 4.7 155 chr2L 1164232 intergenic IntS14 +,CG5080 - chr2L 1164310 intergenic IntS14 +,CG5080 - chr2L 1164387 intergenic IntS14 + chr2L_18_1160001 chr2L_1160001 RAL-320 35 chr2L 1178669 1178708 chr2L 1178772 1178775 14 97 7.5 6.0 6.8 1.8 106 chr2L 1178669 intron CG4896 + chr2L 1178722 intron CG4896 + chr2L 1178775 intron CG4896 + chr2L_14_1175001 chr2L_1175001 RAL-320 36 chr2L 1220130 1220152 chr2L 1227600 1227638 blood 4 7474 9.0 2.0 5.5 0.6 7508 chr2L 1220130 intron CG42329 + chr2L 1223884 intron CG42329 + chr2L 1227638 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-320 37 chr2L 1237964 1238000 chr2L 1238068 1238100 12 103 3.0 3.5 3.2 2.9 136 chr2L 1237964 intergenic not near genes chr2L 1238032 intergenic not near genes chr2L 1238100 intergenic not near genes chr2L_12_1235001 chr2L_1235001 RAL-320 38 chr2L 1244404 1244436 chr2L 1244489 1244533 19 93 3.5 3.5 3.5 4.2 129 chr2L 1244404 intergenic not near genes chr2L 1244468 intergenic not near genes chr2L 1244533 intergenic not near genes chr2L_19_1240001 chr2L_1240001 RAL-320 39 chr2L 1320256 1320308 chr2L 1320354 1320357 12 83 4.0 3.0 3.5 2.7 101 chr2L 1320256 intergenic not near genes chr2L 1320306 intergenic not near genes chr2L 1320357 intergenic not near genes chr2L_12_1320001 chr2L_1320001 RAL-320 40 chr2L 1327163 1327172 chr2L 1327583 1327592 6 420 7.5 6.5 7.0 0.8 429 chr2L 1327163 intergenic not near genes chr2L 1327378 intergenic not near genes chr2L 1327592 intergenic not near genes chr2L_6_1325001 chr2L_1325001 RAL-320 41 chr2L 1327174 1327209 chr2L 1327578 1327629 19 417 2.5 5.0 3.8 4.0 455 chr2L 1327174 intergenic not near genes chr2L 1327402 intergenic not near genes chr2L 1327629 intergenic not near genes chr2L_19_1325001 chr2L_1325001 RAL-320 42 chr2L 1342437 1342477 chr2L 1342538 1342563 13 96 3.5 7.5 5.5 2.0 126 chr2L 1342437 intergenic CG33923 - chr2L 1342500 intergenic CG33923 - chr2L 1342563 intergenic CG33923 - chr2L_13_1340001 chr2L_1340001 RAL-320 43 chr2L 1416794 1416832 chr2L 1416891 1416939 11 101 4.0 7.0 5.5 1.7 145 chr2L 1416794 intron lea - chr2L 1416866 intron lea - chr2L 1416939 intron lea - chr2L_11_1415001 chr2L_1415001 RAL-320 44 chr2L 1570674 1570717 chr2L 1573565 1573609 F-element 18 2891 8.5 7.5 8.0 2.0 2935 chr2L 1570674 intron haf + chr2L 1572142 intron haf + chr2L 1573609 intron haf + chr2L_18_1570001 chr2L_1570001 RAL-320 45 chr2L 1590954 1590989 chr2L 1591050 1591050 12 92 7.0 8.5 7.8 1.4 96 chr2L 1590954 intron haf + chr2L 1591002 intron haf + chr2L 1591050 intron haf + chr2L_12_1590001 chr2L_1590001 RAL-320 46 chr2L 1594415 1594457 chr2L 1594596 1594643 10 177 8.0 8.0 8.0 1.1 228 chr2L 1594415 intron haf + chr2L 1594529 intron haf + chr2L 1594643 intron haf + chr2L_10_1590001 chr2L_1590001 RAL-320 47 chr2L 1615380 1615412 chr2L 1615482 1615507 15 100 0.5 10.0 5.2 2.4 127 chr2L 1615380 intergenic not near genes chr2L 1615444 intergenic not near genes chr2L 1615507 intergenic not near genes chr2L_15_1615001 chr2L_1615001 RAL-320 48 chr2L 1678957 1679005 chr2L 1686442 1686480 blood 18 7481 5.0 4.0 4.5 3.3 7523 chr2L 1678957 intron chinmo + chr2L 1682718 intron chinmo + chr2L 1686480 intron chinmo + chr2L_18_1680001 chr2L_1680001 RAL-320 49 chr2L 1687012 1687028 chr2L 1687108 1687113 6 92 10.5 4.5 7.5 0.7 101 chr2L 1687012 intron chinmo + chr2L 1687062 intron chinmo + chr2L 1687113 intron chinmo + chr2L_6_1685001 chr2L_1685001 RAL-320 50 chr2L 1687031 1687061 chr2L 1687105 1687139 12 87 2.0 3.5 2.8 3.2 108 chr2L 1687031 intron chinmo + chr2L 1687085 intron chinmo + chr2L 1687139 intron chinmo + chr2L_12_1685001 chr2L_1685001 RAL-320 51 chr2L 1711340 1711348 chr2L 1711684 1711692 mdg3 4 344 12.5 8.0 10.2 0.4 352 chr2L 1711340 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711516 3` UTR frtz - chr2L 1711692 3` UTR frtz - chr2L_4_1710001 chr2L_1710001 RAL-320 52 chr2L 1711353 1711368 chr2L 1711682 1711712 mdg3 10 338 11.0 6.0 8.5 1.1 359 chr2L 1711353 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711712 3` UTR frtz - chr2L_10_1710001 chr2L_1710001 RAL-320 53 chr2L 1721838 1721853 chr2L 1721917 1721957 4 83 0.0 6.5 3.2 1.0 119 chr2L 1721838 intron Rim2 - chr2L 1721898 intron Rim2 - chr2L 1721957 intron Rim2 - chr2L_4_1720001 chr2L_1720001 RAL-320 54 chr2L 1724797 1724825 chr2L 1724889 1724926 19 99 9.5 5.0 7.2 2.3 129 chr2L 1724797 3` UTR Eno - chr2L 1724862 3` UTR Eno - chr2L 1724926 3` UTR Eno - chr2L_19_1720001 chr2L_1720001 RAL-320 55 chr2L 1860583 1860610 chr2L 1860708 1860735 7 123 9.0 3.0 6.0 1.0 152 chr2L 1860583 intron CG31663 - chr2L 1860659 intron CG31663 - chr2L 1860735 intron CG31663 - chr2L_7_1860001 chr2L_1860001 RAL-320 56 chr2L 1860611 1860623 chr2L 1860706 1860711 8 109 6.5 2.5 4.5 1.5 100 chr2L 1860611 intron CG31663 - chr2L 1860661 intron CG31663 - chr2L 1860711 intron CG31663 - chr2L_8_1860001 chr2L_1860001 RAL-320 57 chr2L 1946713 1946759 chr2L 1946809 1946855 20 92 4.5 0.0 2.2 6.2 142 chr2L 1946713 5` UTR CG33673 - chr2L 1946784 intergenic CG33673 - chr2L 1946855 intergenic CG33673 - chr2L_20_1945001 chr2L_1945001 RAL-320 58 chr2L 1948611 1948632 chr2L 1948738 1948759 6 127 0.0 3.0 1.5 2.4 148 chr2L 1948611 intergenic not near genes chr2L 1948685 intergenic not near genes chr2L 1948759 intergenic not near genes chr2L_6_1945001 chr2L_1945001 RAL-320 59 chr2L 1993192 1993228 chr2L 1993282 1993334 17 98 6.0 2.0 4.0 3.4 142 chr2L 1993192 intergenic not near genes chr2L 1993263 intergenic not near genes chr2L 1993334 intergenic not near genes chr2L_17_1990001 chr2L_1990001 RAL-320 60 chr2L 2007833 2007872 chr2L 2007961 2008000 10 128 2.0 4.0 3.0 2.5 167 chr2L 2007833 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2008000 intergenic CR45712 +,Nplp4 + chr2L_10_2005001 chr2L_2005001 RAL-320 61 chr2L 2044736 2044760 chr2L 2044961 2044987 7 232 4.5 2.0 3.2 1.7 251 chr2L 2044736 3` UTR CR45298 - chr2L 2044862 3` UTR CR45298 - chr2L 2044987 3` UTR CR45298 - chr2L_7_2040001 chr2L_2040001 RAL-320 62 chr2L 2049203 2049237 chr2L 2049302 2049340 6 98 1.0 4.5 2.8 1.6 137 chr2L 2049203 intergenic not near genes chr2L 2049272 intergenic not near genes chr2L 2049340 intergenic not near genes chr2L_6_2045001 chr2L_2045001 RAL-320 63 chr2L 2100376 2100385 chr2L 2109534 2109556 roo 4 9167 9.5 5.0 7.2 0.5 9180 chr2L 2100376 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109556 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-320 64 chr2L 2100386 2100405 chr2L 2109531 2109555 roo 11 9159 5.0 5.0 5.0 1.8 9169 chr2L 2100386 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109555 intron dpr3 - chr2L_11_2100001 chr2L_2100001 RAL-320 65 chr2L 2112136 2112145 chr2L 2119777 2119811 opus 9 7656 0.5 3.5 2.0 3.0 7675 chr2L 2112136 intergenic not near genes chr2L 2115974 intergenic not near genes chr2L 2119811 intergenic not near genes chr2L_9_2115001 chr2L_2115001 RAL-320 66 chr2L 2123688 2123740 chr2L 2123805 2123858 15 111 1.5 7.0 4.2 2.9 170 chr2L 2123688 intergenic not near genes chr2L 2123773 intergenic not near genes chr2L 2123858 intergenic not near genes chr2L_15_2120001 chr2L_2120001 RAL-320 67 chr2L 2260789 2260831 chr2L 2260890 2260937 10 103 3.5 5.0 4.2 1.9 148 chr2L 2260789 intergenic not near genes chr2L 2260863 intergenic not near genes chr2L 2260937 intergenic not near genes chr2L_10_2260001 chr2L_2260001 RAL-320 68 chr2L 2262289 2262318 chr2L 2262386 2262415 5 97 8.5 5.0 6.8 0.6 126 chr2L 2262289 intergenic not near genes chr2L 2262352 intergenic not near genes chr2L 2262415 intergenic not near genes chr2L_5_2260001 chr2L_2260001 RAL-320 69 chr2L 2294051 2294068 chr2L 2299249 2299293 copia 4 5210 3.0 2.5 2.8 1.1 5242 chr2L 2294051 intergenic not near genes chr2L 2296672 intergenic not near genes chr2L 2299293 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-320 70 chr2L 2311056 2311089 chr2L 2311171 2311195 13 115 2.5 5.5 4.0 2.6 139 chr2L 2311056 intron CG9967 - chr2L 2311126 intron CG9967 - chr2L 2311195 intron CG9967 - chr2L_13_2310001 chr2L_2310001 RAL-320 71 chr2L 2317112 2317130 chr2L 2317293 2317321 4 188 32.0 19.5 25.8 0.1 209 chr2L 2317112 intron,intron CG9967 -,eys + chr2L 2317216 intron,intron CG9967 -,eys + chr2L 2317321 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-320 72 chr2L 2334015 2334061 chr2L 2335094 2335131 9 1077 2.0 4.0 3.0 2.2 1116 chr2L 2334015 intron,intron CG9967 -,eys + chr2L 2334573 intron,intron CG9967 -,eys + chr2L 2335131 intron,intron CG9967 -,eys + chr2L_9_2330001 chr2L_2330001 RAL-320 73 chr2L 2344604 2344656 chr2L 2344781 2344833 13 173 2.0 3.5 2.8 3.4 229 chr2L 2344604 intron,intron CG9967 -,eys + chr2L 2344718 intron,intron CG9967 -,eys + chr2L 2344833 intron,intron CG9967 -,eys + chr2L_13_2340001 chr2L_2340001 RAL-320 74 chr2L 2372348 2372354 chr2L 2372454 2372460 5 106 10.0 4.5 7.2 0.6 112 chr2L 2372348 intergenic CG3609 - chr2L 2372404 intergenic CG3609 - chr2L 2372460 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 RAL-320 75 chr2L 2396277 2396289 chr2L 2396375 2396386 8 98 0.0 4.0 2.0 2.7 109 chr2L 2396277 intron VGlut + chr2L 2396332 intron VGlut + chr2L 2396386 intron VGlut + chr2L_8_2395001 chr2L_2395001 RAL-320 76 chr2L 2399381 2399419 chr2L 2399499 2399537 8 115 2.0 3.5 2.8 2.1 156 chr2L 2399381 intron VGlut + chr2L 2399459 intron VGlut + chr2L 2399537 intron VGlut + chr2L_8_2395001 chr2L_2395001 RAL-320 77 chr2L 2504218 2504237 chr2L 2504308 2504335 9 95 4.5 4.0 4.2 1.7 117 chr2L 2504218 intergenic not near genes chr2L 2504276 intergenic not near genes chr2L 2504335 intergenic not near genes chr2L_9_2500001 chr2L_2500001 RAL-320 78 chr2L 2557199 2557213 chr2L 2557260 2557309 7 90 2.5 6.0 4.2 1.3 110 chr2L 2557199 intergenic not near genes chr2L 2557254 intergenic not near genes chr2L 2557309 intergenic not near genes chr2L_7_2555001 chr2L_2555001 RAL-320 79 chr2L 2565518 2565566 chr2L 2571606 2571654 297 8 6088 5.0 5.0 5.0 1.3 6136 chr2L 2565518 exon Cyp309a2 - chr2L 2568586 intron Cyp309a2 - chr2L 2571654 exon Cyp309a2 - chr2L_8_2565001 chr2L_2565001 RAL-320 80 chr2L 2587821 2587847 chr2L 2587896 2587943 14 89 2.0 5.5 3.8 2.9 122 chr2L 2587821 intergenic not near genes chr2L 2587882 intergenic not near genes chr2L 2587943 intergenic not near genes chr2L_14_2585001 chr2L_2585001 RAL-320 81 chr2L 2618024 2618038 chr2L 2618118 2618137 5 95 9.0 3.5 6.2 0.7 113 chr2L 2618024 intergenic not near genes chr2L 2618080 intergenic not near genes chr2L 2618137 intergenic not near genes chr2L_5_2615001 chr2L_2615001 RAL-320 82 chr2L 2618045 2618062 chr2L 2618114 2618143 8 80 6.5 3.5 5.0 1.3 98 chr2L 2618045 intergenic not near genes chr2L 2618094 intergenic not near genes chr2L 2618143 intergenic not near genes chr2L_8_2615001 chr2L_2615001 RAL-320 83 chr2L 2667603 2667654 chr2L 2667702 2667738 18 94 6.5 4.0 5.2 2.9 135 chr2L 2667603 intergenic not near genes chr2L 2667670 intergenic not near genes chr2L 2667738 intergenic not near genes chr2L_18_2665001 chr2L_2665001 RAL-320 84 chr2L 2698854 2698895 chr2L 2698952 2698987 8 99 0.0 5.0 2.5 2.3 133 chr2L 2698854 intron CG31690 + chr2L 2698920 intron CG31690 + chr2L 2698987 intron CG31690 + chr2L_8_2695001 chr2L_2695001 RAL-320 85 chr2L 2772593 2772625 chr2L 2779195 2779227 297 5 6602 3.5 5.5 4.5 0.9 6634 chr2L 2772593 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779227 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-320 86 chr2L 2807455 2807504 chr2L 2807556 2807597 18 97 5.0 5.0 5.0 3.0 142 chr2L 2807455 intron daw + chr2L 2807526 intron daw + chr2L 2807597 intron daw + chr2L_18_2805001 chr2L_2805001 RAL-320 87 chr2L 2826527 2826544 chr2L 2826632 2826656 5 105 1.5 5.5 3.5 1.1 129 chr2L 2826527 intron Duox - chr2L 2826592 intron Duox - chr2L 2826656 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-320 88 chr2L 2937401 2937448 chr2L 2937498 2937505 13 93 3.0 2.0 2.5 3.7 104 chr2L 2937401 intron lilli + chr2L 2937453 intron lilli + chr2L 2937505 intron lilli + chr2L_13_2935001 chr2L_2935001 RAL-320 89 chr2L 3026215 3026257 chr2L 3026876 3026903 9 654 46.5 29.0 37.8 0.2 688 chr2L 3026215 3` UTR CG3542 + chr2L 3026559 3` UTR CG3605 - chr2L 3026903 exon CG3605 - chr2L_9_3025001 chr2L_3025001 RAL-320 90 chr2L 3073012 3073060 chr2L 3078235 3078282 copia 16 5221 5.5 4.0 4.8 2.8 5270 chr2L 3073012 intron toc - chr2L 3075647 intron toc - chr2L 3078282 intron toc - chr2L_16_3075001 chr2L_3075001 RAL-320 91 chr2L 3103724 3103737 chr2L 3103801 3103833 5 86 0.0 3.0 1.5 2.0 109 chr2L 3103724 intron toc - chr2L 3103778 intron toc - chr2L 3103833 intron toc - chr2L_5_3100001 chr2L_3100001 RAL-320 92 chr2L 3108857 3108881 chr2L 3108946 3108974 11 93 6.5 2.0 4.2 2.1 117 chr2L 3108857 exon toc - chr2L 3108916 intron toc - chr2L 3108974 intron toc - chr2L_11_3105001 chr2L_3105001 RAL-320 93 chr2L 3134286 3134291 chr2L 3134382 3134387 4 96 6.0 9.0 7.5 0.5 101 chr2L 3134286 intron toc - chr2L 3134336 intron toc - chr2L 3134387 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-320 94 chr2L 3202719 3202772 chr2L 3210168 3210221 mdg1 18 7447 2.5 0.0 1.2 8.2 7502 chr2L 3202719 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210221 intergenic CR45336 + chr2L_18_3205001 chr2L_3205001 RAL-320 95 chr2L 3251482 3251525 chr2L 3259064 3259110 springer 12 7584 3.0 6.0 4.5 2.2 7628 chr2L 3251482 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259110 intergenic not near genes chr2L_12_3255001 chr2L_3255001 RAL-320 96 chr2L 3261492 3261506 chr2L 3261604 3261617 6 112 3.0 12.5 7.8 0.7 125 chr2L 3261492 intergenic CR45338 -,CR45337 - chr2L 3261554 intergenic CR45338 -,CR45337 - chr2L 3261617 intergenic CR45338 -,CR45337 - chr2L_6_3260001 chr2L_3260001 RAL-320 97 chr2L 3272959 3272967 chr2L 3273054 3273063 7 96 0.5 10.5 5.5 1.1 104 chr2L 3272959 intergenic not near genes chr2L 3273011 intergenic not near genes chr2L 3273063 intergenic not near genes chr2L_7_3270001 chr2L_3270001 RAL-320 98 chr2L 3289053 3289078 chr2L 3289360 3289374 8 305 12.5 0.0 6.2 1.1 321 chr2L 3289053 intergenic CR44485 + chr2L 3289214 intergenic not near genes chr2L 3289374 intergenic not near genes chr2L_8_3285001 chr2L_3285001 RAL-320 99 chr2L 3291223 3291264 chr2L 3291323 3291364 12 96 3.5 8.0 5.8 1.8 141 chr2L 3291223 intergenic CG9664 - chr2L 3291294 3` UTR CG9664 - chr2L 3291364 3` UTR CG9664 - chr2L_12_3290001 chr2L_3290001 RAL-320 100 chr2L 3312080 3312094 chr2L 3312205 3312219 5 123 0.0 4.0 2.0 1.7 139 chr2L 3312080 intron CG3277 + chr2L 3312150 intron CG3277 + chr2L 3312219 intron CG3277 + chr2L_5_3310001 chr2L_3310001 RAL-320 101 chr2L 3312097 3312103 chr2L 3312186 3312218 5 108 0.0 3.0 1.5 2.0 121 chr2L 3312097 intron CG3277 + chr2L 3312158 intron CG3277 + chr2L 3312218 intron CG3277 + chr2L_5_3310001 chr2L_3310001 RAL-320 102 chr2L 3388586 3388626 chr2L 3388847 3388886 pogo 19 258 4.5 6.0 5.2 3.1 300 chr2L 3388586 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388886 intergenic CG42460 -,CR44791 + chr2L_19_3385001 chr2L_3385001 RAL-320 103 chr2L 3396580 3396622 chr2L 3396791 3396839 17 213 4.5 3.0 3.8 3.5 259 chr2L 3396580 intergenic not near genes chr2L 3396710 intergenic not near genes chr2L 3396839 intergenic CR44792 - chr2L_17_3395001 chr2L_3395001 RAL-320 104 chr2L 3523023 3523047 chr2L 3523152 3523163 7 121 5.5 5.5 5.5 1.1 140 chr2L 3523023 exon Sr-CIV - chr2L 3523093 intron Sr-CIV - chr2L 3523163 exon Sr-CIV - chr2L_7_3520001 chr2L_3520001 RAL-320 105 chr2L 3569951 3569975 chr2L 3570092 3570116 8 141 6.0 0.0 3.0 2.0 165 chr2L 3569951 intergenic not near genes chr2L 3570034 intergenic not near genes chr2L 3570116 intergenic not near genes chr2L_8_3570001 chr2L_3570001 RAL-320 106 chr2L 3582882 3582907 chr2L 3582974 3582991 11 95 2.5 7.0 4.8 1.9 109 chr2L 3582882 intergenic not near genes chr2L 3582936 intergenic not near genes chr2L 3582991 intergenic not near genes chr2L_11_3580001 chr2L_3580001 RAL-320 107 chr2L 3603623 3603653 chr2L 3603722 3603769 14 101 3.5 7.0 5.2 2.3 146 chr2L 3603623 intergenic not near genes chr2L 3603696 intergenic not near genes chr2L 3603769 intergenic odd - chr2L_14_3600001 chr2L_3600001 RAL-320 108 chr2L 3634085 3634134 chr2L 3634187 3634236 18 100 6.0 4.0 5.0 3.0 151 chr2L 3634085 intron for - chr2L 3634160 intron for - chr2L 3634236 intron for - chr2L_18_3630001 chr2L_3630001 RAL-320 109 chr2L 3649772 3649796 chr2L 3654988 3655012 copia 6 5220 0.5 3.0 1.8 2.1 5240 chr2L 3649772 intron for - chr2L 3652392 intron for - chr2L 3655012 intron for - chr2L_6_3650001 chr2L_3650001 RAL-320 110 chr2L 3663301 3663322 chr2L 3663385 3663421 9 97 11.5 1.0 6.2 1.2 120 chr2L 3663301 5` UTR CG34340 + chr2L 3663361 intron CG34340 + chr2L 3663421 intron CG34340 + chr2L_9_3660001 chr2L_3660001 RAL-320 111 chr2L 3663325 3663342 chr2L 3663383 3663415 5 72 5.5 1.5 3.5 1.1 90 chr2L 3663325 intron CG34340 + chr2L 3663370 intron CG34340 + chr2L 3663415 intron CG34340 + chr2L_5_3660001 chr2L_3660001 RAL-320 112 chr2L 3784787 3784806 chr2L 3785666 3785685 6 879 31.0 15.0 23.0 0.2 898 chr2L 3784787 intergenic CG31960 + chr2L 3785236 exon CG31960 + chr2L 3785685 intergenic CG31958 +,CG31960 + chr2L_6_3785001 chr2L_3785001 RAL-320 113 chr2L 3784720 3784748 chr2L 3786362 3786385 5 1638 34.5 17.5 26.0 0.2 1665 chr2L 3784720 intergenic CG31960 + chr2L 3785552 3` UTR CG31960 + chr2L 3786385 intergenic CG31958 + chr2L_5_3785001 chr2L_3785001 RAL-320 114 chr2L 3819014 3819058 chr2L 3819112 3819159 15 97 3.0 0.0 1.5 6.0 145 chr2L 3819014 intergenic CR44077 + chr2L 3819086 intergenic not near genes chr2L 3819159 intergenic not near genes chr2L_15_3815001 chr2L_3815001 RAL-320 115 chr2L 3831818 3831862 chr2L 3831919 3831963 20 100 7.5 5.5 6.5 2.7 145 chr2L 3831818 intergenic not near genes chr2L 3831890 intergenic not near genes chr2L 3831963 intergenic not near genes chr2L_20_3830001 chr2L_3830001 RAL-320 116 chr2L 3891891 3891927 chr2L 3891979 3892007 10 90 1.0 3.5 2.2 3.1 116 chr2L 3891891 intron capu - chr2L 3891949 intron capu - chr2L 3892007 intron capu - chr2L_10_3890001 chr2L_3890001 RAL-320 117 chr2L 3898255 3898307 chr2L 3898360 3898403 6 100 0.0 4.0 2.0 2.0 148 chr2L 3898255 intron capu - chr2L 3898329 intron capu - chr2L 3898403 intron capu - chr2L_6_3895001 chr2L_3895001 RAL-320 118 chr2L 3929108 3929119 chr2L 3929213 3929224 4 104 6.5 1.0 3.8 0.8 116 chr2L 3929108 intron fred - chr2L 3929166 intron fred - chr2L 3929224 intron fred - chr2L_4_3925001 chr2L_3925001 RAL-320 119 chr2L 3943775 3943822 chr2L 3943886 3943896 12 107 2.0 5.0 3.5 2.7 121 chr2L 3943775 intron fred - chr2L 3943836 intron fred - chr2L 3943896 intron fred - chr2L_12_3940001 chr2L_3940001 RAL-320 120 chr2L 4066031 4066051 chr2L 4068866 4068896 Juan 4 2842 6.0 4.5 5.2 0.6 2865 chr2L 4066031 intron ed + chr2L 4067464 intron ed + chr2L 4068896 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-320 121 chr2L 4116797 4116819 chr2L 4116860 4116879 5 55 8.0 4.5 6.2 0.7 82 chr2L 4116797 intergenic not near genes chr2L 4116838 intergenic not near genes chr2L 4116879 intergenic not near genes chr2L_5_4115001 chr2L_4115001 RAL-320 122 chr2L 4150613 4150654 chr2L 4150707 4150749 4 96 0.0 7.0 3.5 0.9 136 chr2L 4150613 exon CG2955 + chr2L 4150681 exon CG2955 + chr2L 4150749 exon CG2955 + chr2L_4_4150001 chr2L_4150001 RAL-320 123 chr2L 4166363 4166411 chr2L 4166466 4166513 14 102 3.0 4.5 3.8 2.9 150 chr2L 4166363 intergenic Or24a - chr2L 4166438 intergenic Or24a - chr2L 4166513 intergenic Or24a - chr2L_14_4165001 chr2L_4165001 RAL-320 124 chr2L 4181296 4181302 chr2L 4183948 4183954 Burdock 4 2652 2.5 11.5 7.0 0.5 2658 chr2L 4181296 intergenic not near genes chr2L 4182625 intergenic not near genes chr2L 4183954 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-320 125 chr2L 4184455 4184507 chr2L 4184793 4184846 13 337 1.5 2.5 2.0 4.3 391 chr2L 4184455 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184846 intergenic not near genes chr2L_13_4180001 chr2L_4180001 RAL-320 126 chr2L 4342255 4342272 chr2L 4342372 4342389 6 115 2.0 1.5 1.8 2.1 134 chr2L 4342255 intron Atet + chr2L 4342322 intron Atet + chr2L 4342389 intron Atet + chr2L_6_4340001 chr2L_4340001 RAL-320 127 chr2L 4351468 4351501 chr2L 4351551 4351597 14 89 4.0 5.5 4.8 2.4 129 chr2L 4351468 intergenic CR44700 + chr2L 4351532 intergenic CR44700 + chr2L 4351597 intergenic CR44700 + chr2L_14_4350001 chr2L_4350001 RAL-320 128 chr2L 4449039 4449050 chr2L 4449327 4449331 4 286 0.0 0.0 0.0 4.0 292 chr2L 4449039 intergenic CG15439 -,MFS18 - chr2L 4449185 intergenic CG15439 - chr2L 4449331 3` UTR CG15439 - chr2L_4_4445001 chr2L_4445001 RAL-320 129 chr2L 4571837 4571890 chr2L 4571942 4571991 13 104 3.5 3.0 3.2 3.1 154 chr2L 4571837 intron dp - chr2L 4571914 intron dp - chr2L 4571991 intron dp - chr2L_13_4570001 chr2L_4570001 RAL-320 130 chr2L 4576621 4576639 chr2L 4576855 4576882 11 252 1.5 5.5 3.5 2.4 261 chr2L 4576621 intron dp - chr2L 4576752 intron dp - chr2L 4576882 intron dp - chr2L_11_4575001 chr2L_4575001 RAL-320 131 chr2L 4601690 4601706 chr2L 4609151 4609157 mdg1 5 7459 6.5 4.5 5.5 0.8 7467 chr2L 4601690 intron dp - chr2L 4605424 intron dp - chr2L 4609157 intron dp - chr2L_5_4605001 chr2L_4605001 RAL-320 132 chr2L 4601711 4601736 chr2L 4609145 4609197 mdg1 13 7458 3.5 4.0 3.8 2.7 7486 chr2L 4601711 intron dp - chr2L 4605454 intron dp - chr2L 4609197 intron dp - chr2L_13_4605001 chr2L_4605001 RAL-320 133 chr2L 4676846 4676892 chr2L 4676938 4676969 8 93 3.0 7.0 5.0 1.3 123 chr2L 4676846 intergenic not near genes chr2L 4676908 intergenic not near genes chr2L 4676969 intergenic not near genes chr2L_8_4675001 chr2L_4675001 RAL-320 134 chr2L 4710341 4710374 chr2L 4710429 4710466 9 97 3.0 6.0 4.5 1.6 125 chr2L 4710341 intron CG34351 + chr2L 4710404 intron CG34351 + chr2L 4710466 intron CG34351 + chr2L_9_4710001 chr2L_4710001 RAL-320 135 chr2L 4748672 4748721 chr2L 4748771 4748785 15 96 6.5 6.0 6.2 2.1 113 chr2L 4748672 intron CG15630 - chr2L 4748728 intron CG15630 - chr2L 4748785 intron CG15630 - chr2L_15_4745001 chr2L_4745001 RAL-320 136 chr2L 4819496 4819516 chr2L 4819617 4819659 9 139 3.5 4.5 4.0 1.8 163 chr2L 4819496 intergenic not near genes chr2L 4819578 intergenic not near genes chr2L 4819659 intergenic not near genes chr2L_9_4815001 chr2L_4815001 RAL-320 137 chr2L 4917302 4917318 chr2L 4917412 4917422 4 106 7.0 6.0 6.5 0.5 120 chr2L 4917302 intron hoe1 - chr2L 4917362 intron hoe1 - chr2L 4917422 intron hoe1 - chr2L_4_4915001 chr2L_4915001 RAL-320 138 chr2L 4917325 4917345 chr2L 4917400 4917422 10 86 2.0 4.5 3.2 2.4 97 chr2L 4917325 intron hoe1 - chr2L 4917374 intron hoe1 - chr2L 4917422 intron hoe1 - chr2L_10_4915001 chr2L_4915001 RAL-320 139 chr2L 4918149 4918194 chr2L 4923242 4923282 jockey 8 5092 6.0 5.0 5.5 1.2 5133 chr2L 4918149 intron hoe1 - chr2L 4920716 intron hoe1 - chr2L 4923282 intron hoe1 - chr2L_8_4920001 chr2L_4920001 RAL-320 140 chr2L 4925656 4925693 chr2L 4925755 4925792 10 98 5.5 0.5 3.0 2.5 136 chr2L 4925656 intron hoe1 - chr2L 4925724 intron hoe1 - chr2L 4925792 intron hoe1 - chr2L_10_4925001 chr2L_4925001 RAL-320 141 chr2L 4953494 4953513 chr2L 4953755 4953774 pogo 8 260 9.0 1.0 5.0 1.3 280 chr2L 4953494 intergenic Jon25Bii - chr2L 4953634 intergenic Jon25Bii - chr2L 4953774 intergenic not near genes chr2L_8_4950001 chr2L_4950001 RAL-320 142 chr2L 5027964 5027987 chr2L 5028048 5028091 7 95 2.0 8.0 5.0 1.2 127 chr2L 5027964 intron vkg - chr2L 5028028 intron vkg - chr2L 5028091 intron vkg - chr2L_7_5025001 chr2L_5025001 RAL-320 143 chr2L 5070725 5070775 chr2L 5070823 5070873 6 98 4.0 0.0 2.0 2.0 148 chr2L 5070725 3` UTR qtc + chr2L 5070799 intergenic qtc +,CR45305 -,RpL37A + chr2L 5070873 intergenic CR45305 -,RpL37A +,qtc + chr2L_6_5070001 chr2L_5070001 RAL-320 144 chr2L 5120955 5121002 chr2L 5121069 5121102 14 109 5.5 2.5 4.0 2.8 147 chr2L 5120955 intron Msp300 + chr2L 5121028 intron Msp300 + chr2L 5121102 intron Msp300 + chr2L_14_5120001 chr2L_5120001 RAL-320 145 chr2L 5200541 5200557 chr2L 5215800 5215814 7 15254 29.5 25.5 27.5 0.2 15273 chr2L 5200541 exon Msp300 + chr2L 5208178 exon Cyp28d2 + chr2L 5215814 exon CG14034 - chr2L_7_5205001 chr2L_5205001 RAL-320 146 chr2L 5248356 5248393 chr2L 5249514 5249535 11 1155 9.0 3.0 6.0 1.6 1179 chr2L 5248356 intron tkv - chr2L 5248946 intron tkv - chr2L 5249535 intron tkv - chr2L_11_5245001 chr2L_5245001 RAL-320 147 chr2L 5296927 5296980 chr2L 5297037 5297059 14 98 9.0 3.5 6.2 1.9 132 chr2L 5296927 intron vri + chr2L 5296993 intron vri + chr2L 5297059 intron vri + chr2L_14_5295001 chr2L_5295001 RAL-320 148 chr2L 5342760 5342800 chr2L 5345160 5345200 Doc 8 2400 4.5 8.5 6.5 1.1 2440 chr2L 5342760 intergenic not near genes chr2L 5343980 intergenic not near genes chr2L 5345200 intergenic not near genes chr2L_8_5340001 chr2L_5340001 RAL-320 149 chr2L 5403119 5403169 chr2L 5403230 5403282 8 112 3.5 0.5 2.0 2.7 163 chr2L 5403119 intergenic not near genes chr2L 5403200 intergenic not near genes chr2L 5403282 intergenic not near genes chr2L_8_5400001 chr2L_5400001 RAL-320 150 chr2L 5449689 5449696 chr2L 5449804 5449816 4 118 7.0 0.0 3.5 0.9 127 chr2L 5449689 intergenic not near genes chr2L 5449752 intergenic not near genes chr2L 5449816 intergenic not near genes chr2L_4_5445001 chr2L_5445001 RAL-320 151 chr2L 5500052 5500077 chr2L 5500149 5500183 12 104 6.5 9.5 8.0 1.3 131 chr2L 5500052 intergenic not near genes chr2L 5500118 intergenic not near genes chr2L 5500183 intergenic not near genes chr2L_12_5500001 chr2L_5500001 RAL-320 152 chr2L 5508522 5508545 chr2L 5508618 5508621 8 92 7.5 9.0 8.2 0.9 99 chr2L 5508522 intergenic not near genes chr2L 5508572 intergenic not near genes chr2L 5508621 intergenic not near genes chr2L_8_5505001 chr2L_5505001 RAL-320 153 chr2L 5508547 5508563 chr2L 5508617 5508659 6 87 7.0 9.0 8.0 0.7 112 chr2L 5508547 intergenic not near genes chr2L 5508603 intergenic not near genes chr2L 5508659 intergenic not near genes chr2L_6_5505001 chr2L_5505001 RAL-320 154 chr2L 5513045 5513077 chr2L 5513144 5513170 5 98 2.0 3.0 2.5 1.4 125 chr2L 5513045 intergenic not near genes chr2L 5513108 intergenic not near genes chr2L 5513170 intergenic not near genes chr2L_5_5510001 chr2L_5510001 RAL-320 155 chr2L 5554642 5554672 chr2L 5554725 5554755 15 85 3.5 3.5 3.5 3.3 113 chr2L 5554642 exon CG14017 + chr2L 5554698 exon CG14017 + chr2L 5554755 exon CG14017 + chr2L_15_5550001 chr2L_5550001 RAL-320 156 chr2L 5676885 5676921 chr2L 5676987 5677037 22 114 1.0 3.0 2.0 7.3 152 chr2L 5676885 intergenic not near genes chr2L 5676961 intergenic not near genes chr2L 5677037 intergenic not near genes chr2L_22_5675001 chr2L_5675001 RAL-320 157 chr2L 5814677 5814707 chr2L 5814780 5814810 9 103 5.5 3.0 4.2 1.7 133 chr2L 5814677 intergenic not near genes chr2L 5814744 intergenic not near genes chr2L 5814810 intergenic not near genes chr2L_9_5810001 chr2L_5810001 RAL-320 158 chr2L 5827708 5827717 chr2L 5836724 5836745 roo 5 9022 7.5 10.0 8.8 0.5 9037 chr2L 5827708 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836745 intron TrissinR + chr2L_5_5830001 chr2L_5830001 RAL-320 159 chr2L 5827718 5827740 chr2L 5836720 5836756 roo 10 9023 5.0 9.5 7.2 1.2 9038 chr2L 5827718 intron TrissinR + chr2L 5832237 intron TrissinR + chr2L 5836756 intron TrissinR + chr2L_10_5830001 chr2L_5830001 RAL-320 160 chr2L 5839177 5839198 chr2L 5839250 5839266 8 79 4.0 0.5 2.2 2.5 89 chr2L 5839177 intron TrissinR + chr2L 5839222 intron TrissinR + chr2L 5839266 intron TrissinR + chr2L_8_5835001 chr2L_5835001 RAL-320 161 chr2L 5842285 5842318 chr2L 5842392 5842415 4 104 5.0 0.0 2.5 1.1 130 chr2L 5842285 intron TrissinR + chr2L 5842350 intron TrissinR + chr2L 5842415 intron TrissinR + chr2L_4_5840001 chr2L_5840001 RAL-320 162 chr2L 5897574 5897616 chr2L 5897677 5897719 12 97 8.5 6.5 7.5 1.4 145 chr2L 5897574 intergenic not near genes chr2L 5897646 intergenic not near genes chr2L 5897719 intergenic not near genes chr2L_12_5895001 chr2L_5895001 RAL-320 163 chr2L 5926307 5926606 chr2L 5926453 5926705 12 101 10.5 0.0 5.2 1.9 398 chr2L 5926307 intron dsf + chr2L 5926506 intron dsf + chr2L 5926705 intron dsf + chr2L_12_5925001 chr2L_5925001 RAL-320 164 chr2L 5926608 5926627 chr2L 5926707 5926726 10 98 6.0 0.5 3.2 2.4 118 chr2L 5926608 intron dsf + chr2L 5926667 intron dsf + chr2L 5926726 intron dsf + chr2L_10_5925001 chr2L_5925001 RAL-320 165 chr2L 5931477 5931526 chr2L 5931581 5931630 13 104 3.5 3.5 3.5 2.9 153 chr2L 5931477 intron dsf + chr2L 5931554 intron dsf + chr2L 5931630 intron dsf + chr2L_13_5930001 chr2L_5930001 RAL-320 166 chr2L 6026913 6026947 chr2L 6027007 6027048 8 102 7.5 5.5 6.5 1.1 135 chr2L 6026913 intron CG9109 - chr2L 6026980 intron CG9109 - chr2L 6027048 intron CG9109 - chr2L_8_6025001 chr2L_6025001 RAL-320 167 chr2L 6136533 6136580 chr2L 6136650 6136697 5 117 3.0 5.0 4.0 1.0 164 chr2L 6136533 intergenic not near genes chr2L 6136615 intergenic not near genes chr2L 6136697 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RAL-320 168 chr2L 6242957 6242983 chr2L 6243075 6243101 9 118 7.0 3.0 5.0 1.5 144 chr2L 6242957 intergenic not near genes chr2L 6243029 intergenic not near genes chr2L 6243101 intergenic not near genes chr2L_9_6240001 chr2L_6240001 RAL-320 169 chr2L 6279621 6279650 chr2L 6279720 6279749 INE-1 9 98 4.0 0.5 2.2 2.8 128 chr2L 6279621 intron Ddr + chr2L 6279685 intron Ddr + chr2L 6279749 intron Ddr + chr2L_9_6275001 chr2L_6275001 RAL-320 170 chr2L 6283923 6283945 chr2L 6284054 6284076 6 131 8.5 3.0 5.8 0.9 153 chr2L 6283923 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284076 intron Ddr + chr2L_6_6280001 chr2L_6280001 RAL-320 171 chr2L 6300554 6300589 chr2L 6300645 6300682 15 99 3.0 2.0 2.5 4.3 128 chr2L 6300554 intron Ddr + chr2L 6300618 intron Ddr + chr2L 6300682 intron Ddr + chr2L_15_6300001 chr2L_6300001 RAL-320 172 chr2L 6343668 6343694 chr2L 6343962 6343988 25 299 49.5 37.5 43.5 0.6 320 chr2L 6343668 intron Cpr + chr2L 6343828 intron Cpr + chr2L 6343988 intron Cpr + chr2L_25_6340001 chr2L_6340001 RAL-320 173 chr2L 6363132 6363153 chr2L 6366078 6366099 Burdock 5 2943 11.0 3.0 7.0 0.6 2967 chr2L 6363132 intergenic not near genes chr2L 6364616 intergenic not near genes chr2L 6366099 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-320 174 chr2L 6363155 6363176 chr2L 6366076 6366111 Burdock 11 2935 6.0 2.5 4.2 2.1 2956 chr2L 6363155 intergenic not near genes chr2L 6364633 intergenic not near genes chr2L 6366111 intergenic not near genes chr2L_11_6360001 chr2L_6360001 RAL-320 175 chr2L 6397403 6397427 chr2L 6397501 6397511 4 94 6.0 2.5 4.2 0.8 108 chr2L 6397403 intron CG42368 - chr2L 6397457 intron CG42368 - chr2L 6397511 intron CG42368 - chr2L_4_6395001 chr2L_6395001 RAL-320 176 chr2L 6426841 6426884 chr2L 6445121 6445162 roo 14 18277 4.5 7.0 5.8 2.1 18321 chr2L 6426841 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445162 exon CG9527 - chr2L_14_6435001 chr2L_6435001 RAL-320 177 chr2L 6472637 6472666 chr2L 6472741 6472761 7 110 3.5 6.0 4.8 1.2 124 chr2L 6472637 intron mmy - chr2L 6472699 intron mmy - chr2L 6472761 intron mmy - chr2L_7_6470001 chr2L_6470001 RAL-320 178 chr2L 6544350 6544393 chr2L 6544462 6544505 16 110 7.0 5.5 6.2 2.2 155 chr2L 6544350 intron eya - chr2L 6544428 intron eya - chr2L 6544505 intron eya - chr2L_16_6540001 chr2L_6540001 RAL-320 179 chr2L 6598096 6598150 chr2L 6599073 6599115 17 971 7.0 4.5 5.8 2.5 1019 chr2L 6598096 intron CG11319 - chr2L 6598606 intron CG11319 - chr2L 6599115 intron CG11319 - chr2L_17_6595001 chr2L_6595001 RAL-320 180 chr2L 6626869 6626880 chr2L 6626974 6626985 4 105 14.0 6.0 10.0 0.4 116 chr2L 6626869 intron Oatp26F - chr2L 6626927 intron Oatp26F - chr2L 6626985 intron Oatp26F - chr2L_4_6625001 chr2L_6625001 RAL-320 181 chr2L 6626885 6626919 chr2L 6626973 6627024 11 99 3.5 5.5 4.5 2.0 139 chr2L 6626885 intron Oatp26F - chr2L 6626954 intron Oatp26F - chr2L 6627024 intron Oatp26F - chr2L_11_6625001 chr2L_6625001 RAL-320 182 chr2L 6740749 6740757 chr2L 6740844 6740864 5 104 0.0 13.5 6.8 0.6 115 chr2L 6740749 intergenic not near genes chr2L 6740806 intergenic not near genes chr2L 6740864 intergenic not near genes chr2L_5_6740001 chr2L_6740001 RAL-320 183 chr2L 6799517 6799569 chr2L 6799624 6799677 12 106 2.0 1.5 1.8 4.3 160 chr2L 6799517 5` UTR CR43610 + chr2L 6799597 5` UTR CR43610 + chr2L 6799677 intergenic CR43610 +,CG17376 - chr2L_12_6795001 chr2L_6795001 RAL-320 184 chr2L 6876774 6876809 chr2L 6882965 6882994 diver 5 6195 5.5 5.0 5.2 0.8 6220 chr2L 6876774 intron Nlg2 + chr2L 6879884 intron Nlg2 + chr2L 6882994 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 RAL-320 185 chr2L 7051151 7051162 chr2L 7051247 7051249 4 94 0.0 2.0 1.0 2.0 98 chr2L 7051151 intron milt + chr2L 7051200 intron milt + chr2L 7051249 intron milt + chr2L_4_7050001 chr2L_7050001 RAL-320 186 chr2L 7097873 7097886 chr2L 7098196 7098209 7 322 6.5 5.0 5.8 1.0 336 chr2L 7097873 intergenic Pvf3 - chr2L 7098041 intergenic Pvf3 - chr2L 7098209 3` UTR Pvf3 - chr2L_7_7095001 chr2L_7095001 RAL-320 187 chr2L 7126743 7126876 chr2L 7126844 7126975 17 99 0.0 0.0 0.0 17.0 232 chr2L 7126743 intron Pvf3 - chr2L 7126859 intron Pvf3 - chr2L 7126975 intron Pvf3 - chr2L_17_7125001 chr2L_7125001 RAL-320 188 chr2L 7254529 7254542 chr2L 7254617 7254640 4 96 2.0 5.5 3.8 0.8 111 chr2L 7254529 intergenic not near genes chr2L 7254584 intergenic not near genes chr2L 7254640 intergenic not near genes chr2L_4_7250001 chr2L_7250001 RAL-320 189 chr2L 7295978 7296021 chr2L 7296136 7296179 12 158 4.0 1.5 2.8 3.2 201 chr2L 7295978 intergenic not near genes chr2L 7296078 intergenic not near genes chr2L 7296179 intergenic not near genes chr2L_12_7295001 chr2L_7295001 RAL-320 190 chr2L 7301279 7301330 chr2L 7301382 7301428 11 97 3.5 2.5 3.0 2.8 149 chr2L 7301279 intergenic not near genes chr2L 7301354 intergenic not near genes chr2L 7301428 intergenic not near genes chr2L_11_7300001 chr2L_7300001 RAL-320 191 chr2L 7335184 7335230 chr2L 7335301 7335347 10 116 4.0 3.5 3.8 2.1 163 chr2L 7335184 intron Wnt6 + chr2L 7335266 intron Wnt6 + chr2L 7335347 intron Wnt6 + chr2L_10_7335001 chr2L_7335001 RAL-320 192 chr2L 7343334 7343349 chr2L 7350444 7350475 roo 6 7122 2.5 6.5 4.5 1.1 7141 chr2L 7343334 intron Wnt6 + chr2L 7346904 intron Wnt6 + chr2L 7350475 intron Wnt6 + chr2L_6_7345001 chr2L_7345001 RAL-320 193 chr2L 7399291 7399332 chr2L 7399684 7399723 12 389 1.0 5.5 3.2 2.9 432 chr2L 7399291 intergenic not near genes chr2L 7399507 intergenic not near genes chr2L 7399723 intergenic not near genes chr2L_12_7395001 chr2L_7395001 RAL-320 194 chr2L 7436185 7436189 chr2L 7436295 7436299 6 110 8.5 4.0 6.2 0.8 114 chr2L 7436185 intergenic not near genes chr2L 7436242 intergenic not near genes chr2L 7436299 intergenic not near genes chr2L_6_7435001 chr2L_7435001 RAL-320 195 chr2L 7437171 7437211 chr2L 7437271 7437311 12 99 4.0 3.5 3.8 2.5 140 chr2L 7437171 intergenic CG5973 + chr2L 7437241 intergenic CG5973 + chr2L 7437311 intergenic CG5973 + chr2L_12_7435001 chr2L_7435001 RAL-320 196 chr2L 7439915 7439968 chr2L 7440346 7440399 19 422 3.0 6.5 4.8 3.3 484 chr2L 7439915 intron CG5973 + chr2L 7440157 intron CG5973 + chr2L 7440399 intron CG5973 + chr2L_19_7440001 chr2L_7440001 RAL-320 197 chr2L 7489261 7489285 chr2L 7489329 7489381 5 86 4.0 4.5 4.2 1.0 120 chr2L 7489261 intron Ziz - chr2L 7489321 intron Ziz - chr2L 7489381 intron Ziz - chr2L_5_7485001 chr2L_7485001 RAL-320 198 chr2L 7493404 7493413 chr2L 7493497 7493519 4 103 0.0 6.5 3.2 1.0 115 chr2L 7493404 intron Ziz - chr2L 7493462 intron Ziz - chr2L 7493519 intron Ziz - chr2L_4_7490001 chr2L_7490001 RAL-320 199 chr2L 7502745 7502769 chr2L 7502811 7502865 16 86 6.0 8.5 7.2 2.0 120 chr2L 7502745 intron RapGAP1 - chr2L 7502805 intron RapGAP1 - chr2L 7502865 intron RapGAP1 - chr2L_16_7500001 chr2L_7500001 RAL-320 200 chr2L 7555198 7555232 chr2L 7555295 7555329 13 94 0.0 5.0 2.5 3.7 131 chr2L 7555198 intron RapGAP1 - chr2L 7555264 intron RapGAP1 - chr2L 7555329 intron RapGAP1 - chr2L_13_7555001 chr2L_7555001 RAL-320 201 chr2L 7562178 7562183 chr2L 7562278 7562283 4 100 7.0 8.5 7.8 0.5 105 chr2L 7562178 intron RapGAP1 - chr2L 7562230 intron RapGAP1 - chr2L 7562283 intron RapGAP1 - chr2L_4_7560001 chr2L_7560001 RAL-320 202 chr2L 7567470 7567510 chr2L 7567567 7567607 16 97 8.0 7.5 7.8 1.8 137 chr2L 7567470 intron RapGAP1 - chr2L 7567538 intron RapGAP1 - chr2L 7567607 intron RapGAP1 - chr2L_16_7565001 chr2L_7565001 RAL-320 203 chr2L 7569287 7569318 chr2L 7569417 7569438 5 122 1.0 2.5 1.8 1.8 151 chr2L 7569287 intron RapGAP1 - chr2L 7569362 intron RapGAP1 - chr2L 7569438 intron RapGAP1 - chr2L_5_7565001 chr2L_7565001 RAL-320 204 chr2L 7579881 7579905 chr2L 7579977 7579992 12 96 8.5 6.5 7.5 1.4 111 chr2L 7579881 intergenic not near genes chr2L 7579936 intergenic not near genes chr2L 7579992 intergenic not near genes chr2L_12_7575001 chr2L_7575001 RAL-320 205 chr2L 7579910 7579923 chr2L 7579972 7580025 8 91 5.5 5.0 5.2 1.3 115 chr2L 7579910 intergenic not near genes chr2L 7579968 intergenic not near genes chr2L 7580025 intergenic not near genes chr2L_8_7575001 chr2L_7575001 RAL-320 206 chr2L 7640409 7640419 chr2L 7640515 7640522 6 105 2.0 0.5 1.2 2.7 113 chr2L 7640409 intergenic not near genes chr2L 7640466 intergenic not near genes chr2L 7640522 intergenic not near genes chr2L_6_7640001 chr2L_7640001 RAL-320 207 chr2L 7664028 7664065 chr2L 7664145 7664182 8 114 5.5 2.5 4.0 1.6 154 chr2L 7664028 intron Slob - chr2L 7664105 intron Slob - chr2L 7664182 intron Slob - chr2L_8_7660001 chr2L_7660001 RAL-320 208 chr2L 7757426 7757478 chr2L 7757568 7757621 15 134 3.0 4.0 3.5 3.3 195 chr2L 7757426 intron CG7196 + chr2L 7757524 intron CG7196 + chr2L 7757621 intron CG7196 + chr2L_15_7755001 chr2L_7755001 RAL-320 209 chr2L 7766611 7766661 chr2L 7766707 7766709 5 78 4.0 0.5 2.2 1.6 98 chr2L 7766611 intergenic not near genes chr2L 7766660 intergenic not near genes chr2L 7766709 intergenic not near genes chr2L_5_7765001 chr2L_7765001 RAL-320 210 chr2L 7781231 7781242 chr2L 7781350 7781351 5 117 9.0 3.5 6.2 0.7 120 chr2L 7781231 exon Uro + chr2L 7781291 3` UTR Uro + chr2L 7781351 3` UTR Uro + chr2L_5_7780001 chr2L_7780001 RAL-320 211 chr2L 7959023 7959070 chr2L 7960454 7960486 pogo 11 1428 4.5 6.0 5.2 1.8 1463 chr2L 7959023 intron Snoo - chr2L 7959754 intron Snoo - chr2L 7960486 intron Snoo - chr2L_11_7955001 chr2L_7955001 RAL-320 212 chr2L 7977070 7977113 chr2L 7984066 7984108 297 10 6984 3.5 2.0 2.8 2.6 7038 chr2L 7977070 intron Snoo - chr2L 7980589 intron Snoo - chr2L 7984108 intron,5` UTR Snoo -,CG7231 + chr2L_10_7980001 chr2L_7980001 RAL-320 213 chr2L 7997012 7997060 chr2L 7997132 7997180 16 120 3.5 3.0 3.2 3.8 168 chr2L 7997012 intron CG7227 - chr2L 7997096 intron CG7227 - chr2L 7997180 intron CG7227 - chr2L_16_7995001 chr2L_7995001 RAL-320 214 chr2L 7999751 7999771 chr2L 7999848 7999868 10 96 4.5 11.0 7.8 1.1 117 chr2L 7999751 intron Wwox - chr2L 7999810 3` UTR Wwox - chr2L 7999868 exon Wwox - chr2L_10_7995001 chr2L_7995001 RAL-320 215 chr2L 8013598 8013614 chr2L 8018822 8018826 copia 6 5219 9.5 0.0 4.8 1.0 5228 chr2L 8013598 intron Tg + chr2L 8016212 intron Tg + chr2L 8018826 intron Tg + chr2L_6_8015001 chr2L_8015001 RAL-320 216 chr2L 8018815 8018833 chr2L 8023619 8023637 Doc 5 4801 0.0 12.0 6.0 0.7 4822 chr2L 8018815 intron Tg + chr2L 8021226 intron Tg + chr2L 8023637 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-320 217 chr2L 8044077 8044124 chr2L 8044176 8044223 20 98 2.5 2.5 2.5 5.7 146 chr2L 8044077 intron CG7466 + chr2L 8044150 intron CG7466 + chr2L 8044223 intron CG7466 + chr2L_20_8040001 chr2L_8040001 RAL-320 218 chr2L 8167124 8167178 chr2L 8167235 8167274 17 105 4.0 4.0 4.0 3.4 150 chr2L 8167124 intron Piezo + chr2L 8167199 intron Piezo + chr2L 8167274 intron Piezo + chr2L_17_8165001 chr2L_8165001 RAL-320 219 chr2L 8171281 8171300 chr2L 8171362 8171401 12 95 0.5 7.0 3.8 2.5 120 chr2L 8171281 intron Piezo + chr2L 8171341 intron Piezo + chr2L 8171401 intron Piezo + chr2L_12_8170001 chr2L_8170001 RAL-320 220 chr2L 8184900 8184955 chr2L 8185011 8185057 16 106 5.0 6.5 5.8 2.4 157 chr2L 8184900 intron Piezo + chr2L 8184978 intron Piezo + chr2L 8185057 intron Piezo + chr2L_16_8180001 chr2L_8180001 RAL-320 221 chr2L 8230309 8230347 chr2L 8230413 8230447 6 99 2.0 5.0 3.5 1.3 138 chr2L 8230309 5` UTR Pvr - chr2L 8230378 intron Pvr - chr2L 8230447 intron Pvr - chr2L_6_8230001 chr2L_8230001 RAL-320 222 chr2L 8233723 8233758 chr2L 8234274 8234313 7 558 0.0 0.5 0.2 5.8 590 chr2L 8233723 intron Pvr - chr2L 8234018 intron Pvr - chr2L 8234313 intron Pvr - chr2L_7_8230001 chr2L_8230001 RAL-320 223 chr2L 8244713 8244748 chr2L 8244854 8244890 13 139 1.0 4.5 2.8 3.4 177 chr2L 8244713 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244890 intron CG8086 - chr2L_13_8240001 chr2L_8240001 RAL-320 224 chr2L 8286284 8286329 chr2L 8286391 8286416 6 104 2.5 6.0 4.2 1.2 132 chr2L 8286284 intron Btk29A - chr2L 8286350 intron Btk29A - chr2L 8286416 intron Btk29A - chr2L_6_8285001 chr2L_8285001 RAL-320 225 chr2L 8322923 8322931 chr2L 8323019 8323027 4 96 5.0 7.0 6.0 0.6 104 chr2L 8322923 exon CG7781 - chr2L 8322975 intron CG7781 - chr2L 8323027 intron CG7781 - chr2L_4_8320001 chr2L_8320001 RAL-320 226 chr2L 8336915 8336967 chr2L 8337014 8337026 15 92 0.0 2.5 1.2 6.8 111 chr2L 8336915 intergenic not near genes chr2L 8336970 intergenic not near genes chr2L 8337026 intergenic not near genes chr2L_15_8335001 chr2L_8335001 RAL-320 227 chr2L 8351552 8351587 chr2L 8351649 8351661 6 92 0.0 6.5 3.2 1.4 109 chr2L 8351552 intergenic CG7778 + chr2L 8351606 intergenic CG7778 + chr2L 8351661 intergenic not near genes chr2L_6_8350001 chr2L_8350001 RAL-320 228 chr2L 8451846 8451860 chr2L 8451981 8451995 8 135 5.5 7.5 6.5 1.1 149 chr2L 8451846 5` UTR fu12 - chr2L 8451920 intron fu12 - chr2L 8451995 intron fu12 - chr2L_8_8450001 chr2L_8450001 RAL-320 229 chr2L 8452401 8452441 chr2L 8461592 8461632 roo 9 9188 8.0 5.5 6.8 1.2 9231 chr2L 8452401 intron fu12 - chr2L 8457016 intron fu12 - chr2L 8461632 intron fu12 - chr2L_9_8455001 chr2L_8455001 RAL-320 230 chr2L 8538151 8538170 chr2L 8538247 8538256 4 94 6.5 0.0 3.2 1.0 105 chr2L 8538151 intron CG17834 + chr2L 8538204 intron CG17834 + chr2L 8538256 intron CG17834 + chr2L_4_8535001 chr2L_8535001 RAL-320 231 chr2L 8594448 8594491 chr2L 8601522 8601560 297 15 7074 5.0 7.5 6.2 2.1 7112 chr2L 8594448 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598004 intron Sema-1a + chr2L 8601560 intron Sema-1a + chr2L_15_8595001 chr2L_8595001 RAL-320 232 chr2L 8612795 8612841 chr2L 8613040 8613077 14 244 1.5 3.5 2.5 4.0 282 chr2L 8612795 intron Sema-1a + chr2L 8612936 intron Sema-1a + chr2L 8613077 intron Sema-1a + chr2L_14_8610001 chr2L_8610001 RAL-320 233 chr2L 8629256 8629298 chr2L 8629353 8629395 15 94 4.0 3.0 3.5 3.3 139 chr2L 8629256 intron Sema-1a + chr2L 8629326 intron Sema-1a + chr2L 8629395 intron Sema-1a + chr2L_15_8625001 chr2L_8625001 RAL-320 234 chr2L 8676180 8676216 chr2L 8676383 8676433 10 207 3.5 6.0 4.8 1.7 253 chr2L 8676180 exon Glt + chr2L 8676306 exon Glt + chr2L 8676433 exon Glt + chr2L_10_8675001 chr2L_8675001 RAL-320 235 chr2L 8723100 8723134 chr2L 8731492 8731531 Tirant 14 8396 6.5 5.5 6.0 2.0 8431 chr2L 8723100 intron raw - chr2L 8727316 intron raw - chr2L 8731531 intron raw - chr2L_14_8725001 chr2L_8725001 RAL-320 236 chr2L 8772781 8772789 chr2L 8772881 8772889 6 103 9.5 0.0 4.8 1.0 108 chr2L 8772781 intergenic CG9466 -,CG9465 - chr2L 8772835 intergenic CG9466 -,CG9465 - chr2L 8772889 intergenic CG9466 - chr2L_6_8770001 chr2L_8770001 RAL-320 237 chr2L 8772794 8772818 chr2L 8772879 8772927 7 101 3.0 0.0 1.5 2.8 133 chr2L 8772794 intergenic CG9466 -,CG9465 - chr2L 8772860 intergenic CG9466 - chr2L 8772927 intergenic CG9466 - chr2L_7_8770001 chr2L_8770001 RAL-320 238 chr2L 8799785 8799832 chr2L 8799915 8799968 15 129 5.0 6.5 5.8 2.2 183 chr2L 8799785 intergenic not near genes chr2L 8799876 intergenic not near genes chr2L 8799968 intergenic not near genes chr2L_15_8795001 chr2L_8795001 RAL-320 239 chr2L 8820909 8820951 chr2L 8821008 8821050 14 94 4.5 5.0 4.8 2.4 141 chr2L 8820909 intergenic not near genes chr2L 8820980 intergenic not near genes chr2L 8821050 intergenic not near genes chr2L_14_8820001 chr2L_8820001 RAL-320 240 chr2L 8901073 8901115 chr2L 8901164 8901207 16 92 3.5 5.0 4.2 3.1 134 chr2L 8901073 intron CG34398 + chr2L 8901140 intron CG34398 + chr2L 8901207 intron CG34398 + chr2L_16_8900001 chr2L_8900001 RAL-320 241 chr2L 8902448 8902484 chr2L 8902615 8902651 13 167 5.5 8.5 7.0 1.6 203 chr2L 8902448 intron CG34398 + chr2L 8902550 intron CG34398 + chr2L 8902651 intron CG34398 + chr2L_13_8900001 chr2L_8900001 RAL-320 242 chr2L 8910735 8910745 chr2L 8910826 8910831 5 100 5.5 6.5 6.0 0.7 96 chr2L 8910735 intron CG34398 + chr2L 8910783 intron CG34398 + chr2L 8910831 intron CG34398 + chr2L_5_8910001 chr2L_8910001 RAL-320 243 chr2L 8919758 8919809 chr2L 8919879 8919930 17 120 3.0 4.0 3.5 3.8 172 chr2L 8919758 intron CG34398 + chr2L 8919844 intron CG34398 + chr2L 8919930 intron CG34398 + chr2L_17_8915001 chr2L_8915001 RAL-320 244 chr2L 9000264 9000293 chr2L 9007793 9007823 roo 15 7528 11.5 4.0 7.8 1.7 7559 chr2L 9000264 intergenic Try29F + chr2L 9004044 intergenic not near genes chr2L 9007823 intergenic not near genes chr2L_15_9000001 chr2L_9000001 RAL-320 245 chr2L 9040011 9040058 chr2L 9040118 9040165 15 104 3.0 5.5 4.2 2.9 154 chr2L 9040011 intergenic not near genes chr2L 9040088 intergenic not near genes chr2L 9040165 intergenic not near genes chr2L_15_9040001 chr2L_9040001 RAL-320 246 chr2L 9053387 9053427 chr2L 9053642 9053682 19 254 4.0 0.5 2.2 5.9 295 chr2L 9053387 exon CG31708 - chr2L 9053534 intron CG31708 - chr2L 9053682 intron CG31708 - chr2L_19_9050001 chr2L_9050001 RAL-320 247 chr2L 9084339 9084340 chr2L 16217660 16217660 7 7133321 20.0 21.5 20.8 0.3 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_12650001 chr2L_12650001 RAL-320 248 chr2L 9113780 9113809 chr2L 9113910 9113938 12 126 2.5 1.0 1.8 4.3 158 chr2L 9113780 intergenic Or30a + chr2L 9113859 intergenic not near genes chr2L 9113938 intergenic not near genes chr2L_12_9110001 chr2L_9110001 RAL-320 249 chr2L 9154879 9154904 chr2L 9154982 9155007 8 103 0.0 4.0 2.0 2.7 128 chr2L 9154879 intron CG32982 + chr2L 9154943 intron CG32982 + chr2L 9155007 intron CG32982 + chr2L_8_9150001 chr2L_9150001 RAL-320 250 chr2L 9158774 9158819 chr2L 9158889 9158941 12 116 6.5 0.5 3.5 2.7 167 chr2L 9158774 intron CG32982 + chr2L 9158858 intron CG32982 + chr2L 9158941 intron CG32982 + chr2L_12_9155001 chr2L_9155001 RAL-320 251 chr2L 9192719 9192744 chr2L 9192850 9192881 8 134 3.5 4.0 3.8 1.7 162 chr2L 9192719 intron tai + chr2L 9192800 intron tai + chr2L 9192881 intron tai + chr2L_8_9190001 chr2L_9190001 RAL-320 252 chr2L 9195853 9195881 chr2L 9195956 9195984 10 103 5.5 7.0 6.2 1.4 131 chr2L 9195853 intron tai + chr2L 9195918 intron tai + chr2L 9195984 intron tai + chr2L_10_9195001 chr2L_9195001 RAL-320 253 chr2L 9217951 9217996 chr2L 9222758 9222803 Doc 13 4800 7.0 9.5 8.2 1.4 4852 chr2L 9217951 intron tai + chr2L 9220377 intron tai + chr2L 9222803 intron tai + chr2L_13_9220001 chr2L_9220001 RAL-320 254 chr2L 9279974 9280020 chr2L 9280082 9280108 6 100 0.0 4.0 2.0 2.0 134 chr2L 9279974 intron Ggamma30A + chr2L 9280041 intron Ggamma30A + chr2L 9280108 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-320 255 chr2L 9297360 9297393 chr2L 9297457 9297485 13 94 5.5 3.5 4.5 2.4 125 chr2L 9297360 3` UTR Ggamma30A + chr2L 9297422 3` UTR Ggamma30A + chr2L 9297485 3` UTR Ggamma30A + chr2L_13_9295001 chr2L_9295001 RAL-320 256 chr2L 9297394 9297404 chr2L 9297456 9297501 4 88 5.0 3.5 4.2 0.8 107 chr2L 9297394 3` UTR Ggamma30A + chr2L 9297448 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_4_9295001 chr2L_9295001 RAL-320 257 chr2L 9303494 9303547 chr2L 9303594 9303647 12 92 3.0 3.0 3.0 3.0 153 chr2L 9303494 intergenic not near genes chr2L 9303570 intergenic not near genes chr2L 9303647 intergenic not near genes chr2L_12_9300001 chr2L_9300001 RAL-320 258 chr2L 9317409 9317560 chr2L 9317547 9317836 8 248 0.0 0.0 0.0 8.0 427 chr2L 9317409 intergenic not near genes chr2L 9317622 intergenic not near genes chr2L 9317836 intergenic not near genes chr2L_8_9315001 chr2L_9315001 RAL-320 259 chr2L 9337890 9337898 chr2L 9337987 9337995 5 97 7.5 3.0 5.2 0.8 105 chr2L 9337890 intron Eaat1 + chr2L 9337942 intron Eaat1 + chr2L 9337995 intron Eaat1 + chr2L_5_9335001 chr2L_9335001 RAL-320 260 chr2L 9380233 9380252 chr2L 9380348 9380367 7 115 5.0 2.0 3.5 1.6 134 chr2L 9380233 exon Shawl - chr2L 9380300 intron Shawl - chr2L 9380367 intron Shawl - chr2L_7_9380001 chr2L_9380001 RAL-320 261 chr2L 9385113 9385143 chr2L 9385218 9385253 12 108 7.0 5.0 6.0 1.7 140 chr2L 9385113 intron Shawl - chr2L 9385183 intron Shawl - chr2L 9385253 intron Shawl - chr2L_12_9385001 chr2L_9385001 RAL-320 262 chr2L 9387238 9387276 chr2L 9387356 9387394 5 118 4.0 2.5 3.2 1.2 156 chr2L 9387238 intron Shawl - chr2L 9387316 intron Shawl - chr2L 9387394 intron,5` UTR Shawl -,Aldh + chr2L_5_9385001 chr2L_9385001 RAL-320 263 chr2L 9396644 9396670 chr2L 9396751 9396777 7 104 10.0 6.0 8.0 0.8 133 chr2L 9396644 intron Shawl - chr2L 9396710 intron Shawl - chr2L 9396777 intron Shawl - chr2L_7_9395001 chr2L_9395001 RAL-320 264 chr2L 9407889 9407905 chr2L 9407991 9408002 8 101 5.5 6.0 5.8 1.2 113 chr2L 9407889 intron Shawl - chr2L 9407946 intron Shawl - chr2L 9408002 intron Shawl - chr2L_8_9405001 chr2L_9405001 RAL-320 265 chr2L 9456914 9456942 chr2L 9457015 9457043 14 96 4.5 2.0 3.2 3.3 129 chr2L 9456914 intron numb + chr2L 9456978 intron numb + chr2L 9457043 intron numb + chr2L_14_9455001 chr2L_9455001 RAL-320 266 chr2L 9470092 9470115 chr2L 9470190 9470214 7 98 4.0 9.0 6.5 0.9 122 chr2L 9470092 intergenic CR43769 + chr2L 9470153 intergenic CR43769 + chr2L 9470214 intergenic CR43769 + chr2L_7_9470001 chr2L_9470001 RAL-320 267 chr2L 9474764 9474799 chr2L 9474878 9474891 10 112 3.0 4.5 3.8 2.1 127 chr2L 9474764 intergenic not near genes chr2L 9474828 intergenic not near genes chr2L 9474891 intergenic not near genes chr2L_10_9470001 chr2L_9470001 RAL-320 268 chr2L 9490516 9490549 chr2L 9490601 9490649 13 89 3.5 4.0 3.8 2.7 133 chr2L 9490516 intergenic not near genes chr2L 9490582 intergenic not near genes chr2L 9490649 intergenic not near genes chr2L_13_9490001 chr2L_9490001 RAL-320 269 chr2L 9619492 9619521 chr2L 9619849 9619878 10 356 3.5 5.0 4.2 1.9 386 chr2L 9619492 intron GlcAT-S + chr2L 9619685 intron GlcAT-S + chr2L 9619878 intron GlcAT-S + chr2L_10_9615001 chr2L_9615001 RAL-320 270 chr2L 9719756 9719780 chr2L 9719859 9719883 5 103 0.0 2.0 1.0 2.5 127 chr2L 9719756 intron Nckx30C - chr2L 9719820 intron Nckx30C - chr2L 9719883 intron Nckx30C - chr2L_5_9715001 chr2L_9715001 RAL-320 271 chr2L 9734282 9734291 chr2L 9734378 9734382 7 98 8.0 11.5 9.8 0.6 100 chr2L 9734282 intron Nckx30C - chr2L 9734332 intron Nckx30C - chr2L 9734382 intron Nckx30C - chr2L_7_9730001 chr2L_9730001 RAL-320 272 chr2L 9770748 9770770 chr2L 9770871 9770893 9 121 10.0 4.0 7.0 1.1 145 chr2L 9770748 intron ppk18 - chr2L 9770820 intron ppk18 - chr2L 9770893 exon ppk18 - chr2L_9_9770001 chr2L_9770001 RAL-320 273 chr2L 9870074 9870117 chr2L 9870178 9870178 7 94 7.0 0.0 3.5 1.6 104 chr2L 9870074 5` UTR nAChRalpha6 - chr2L 9870126 5` UTR nAChRalpha6 - chr2L 9870178 5` UTR nAChRalpha6 - chr2L_7_9870001 chr2L_9870001 RAL-320 274 chr2L 9892481 9892532 chr2L 9892577 9892628 17 95 5.5 6.0 5.8 2.5 147 chr2L 9892481 intron mtDNA-helicase - chr2L 9892554 intron mtDNA-helicase - chr2L 9892628 intron mtDNA-helicase - chr2L_17_9890001 chr2L_9890001 RAL-320 275 chr2L 9973725 9973753 chr2L 9980849 9980879 HMS-Beagle 12 7132 4.0 5.0 4.5 2.2 7154 chr2L 9973725 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980879 intergenic not near genes chr2L_12_9975001 chr2L_9975001 RAL-320 276 chr2L 9986342 9986374 chr2L 9986445 9986488 11 102 6.5 5.0 5.8 1.6 146 chr2L 9986342 intron bib + chr2L 9986415 intron bib + chr2L 9986488 intron bib + chr2L_11_9985001 chr2L_9985001 RAL-320 277 chr2L 10051732 10051747 chr2L 10051812 10051846 7 94 5.0 7.0 6.0 1.0 114 chr2L 10051732 5` UTR CR44874 + chr2L 10051789 5` UTR CR44874 + chr2L 10051846 5` UTR CR44874 + chr2L_7_10050001 chr2L_10050001 RAL-320 278 chr2L 10058749 10058766 chr2L 10058845 10058862 8 96 5.5 3.5 4.5 1.5 113 chr2L 10058749 exon Pen + chr2L 10058806 intron Pen + chr2L 10058862 exon Pen + chr2L_8_10055001 chr2L_10055001 RAL-320 279 chr2L 10108960 10109015 chr2L 10109063 10109076 19 96 4.0 3.5 3.8 4.0 116 chr2L 10108960 intron,intron CG44153 -,CG34109 + chr2L 10109018 intron,intron CG44153 -,CG34109 + chr2L 10109076 intron,intron CG44153 -,CG34109 + chr2L_19_10105001 chr2L_10105001 RAL-320 280 chr2L 10119233 10119266 chr2L 10119562 10119595 6 328 4.5 8.0 6.2 0.8 362 chr2L 10119233 intron,intron CG44153 -,CG34109 + chr2L 10119414 intron,intron CG44153 -,CG34109 + chr2L 10119595 intron,intron CG44153 -,CG34109 + chr2L_6_10115001 chr2L_10115001 RAL-320 281 chr2L 10153195 10153236 chr2L 10153282 10153300 18 88 2.0 4.0 3.0 4.5 105 chr2L 10153195 intron,exon CG44153 -,CG4839 + chr2L 10153248 intron,intron CG44153 -,CG4839 + chr2L 10153300 intron,intron CG44153 -,CG4839 + chr2L_18_10150001 chr2L_10150001 RAL-320 282 chr2L 10156310 10156354 chr2L 10163800 10163827 blood 15 7482 4.5 6.0 5.2 2.4 7517 chr2L 10156310 intron,3` UTR CG44153 -,CG4839 + chr2L 10160068 intron CG44153 - chr2L 10163827 intron CG44153 - chr2L_15_10160001 chr2L_10160001 RAL-320 283 chr2L 10175634 10175644 chr2L 10175740 10175750 4 106 5.0 5.0 5.0 0.7 116 chr2L 10175634 intron CG44153 - chr2L 10175692 intron CG44153 - chr2L 10175750 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-320 284 chr2L 10209828 10209857 chr2L 10209925 10209944 10 96 3.5 0.0 1.8 3.6 116 chr2L 10209828 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209886 3` UTR CG5727 - chr2L 10209944 3` UTR CG5727 - chr2L_10_10205001 chr2L_10205001 RAL-320 285 chr2L 10232918 10232937 chr2L 10233016 10233035 5 98 9.5 9.5 9.5 0.5 117 chr2L 10232918 intron eEF1delta + chr2L 10232976 intron eEF1delta + chr2L 10233035 intron eEF1delta + chr2L_5_10230001 chr2L_10230001 RAL-320 286 chr2L 10348401 10348408 chr2L 10348474 10348506 4 94 3.5 1.5 2.5 1.1 105 chr2L 10348401 intron CG34367 - chr2L 10348454 intron CG34367 - chr2L 10348506 intron CG34367 - chr2L_4_10345001 chr2L_10345001 RAL-320 287 chr2L 10458194 10458214 chr2L 10458310 10458330 6 116 1.0 3.5 2.2 1.9 136 chr2L 10458194 intron LM408 + chr2L 10458262 intron LM408 + chr2L 10458330 intron LM408 + chr2L_6_10455001 chr2L_10455001 RAL-320 288 chr2L 10474366 10474397 chr2L 10474467 10474485 5 91 6.5 4.0 5.2 0.8 119 chr2L 10474366 intergenic RluA-1 - chr2L 10474426 intergenic RluA-1 - chr2L 10474485 intergenic RluA-1 - chr2L_5_10470001 chr2L_10470001 RAL-320 289 chr2L 10480291 10480324 chr2L 10480389 10480422 12 95 5.0 0.0 2.5 3.4 131 chr2L 10480291 intron RluA-2 + chr2L 10480356 intron RluA-2 + chr2L 10480422 intron RluA-2 + chr2L_12_10480001 chr2L_10480001 RAL-320 290 chr2L 10495295 10495465 chr2L 10495382 10495571 16 103 0.0 0.5 0.2 13.3 276 chr2L 10495295 intron Myo31DF - chr2L 10495433 intron Myo31DF - chr2L 10495571 intron Myo31DF - chr2L_16_10495001 chr2L_10495001 RAL-320 291 chr2L 10554305 10554313 chr2L 10554408 10554416 4 103 11.5 6.0 8.8 0.4 111 chr2L 10554305 intron Trim9 + chr2L 10554360 intron Trim9 + chr2L 10554416 intron Trim9 + chr2L_4_10550001 chr2L_10550001 RAL-320 292 chr2L 10554314 10554355 chr2L 10554402 10554458 14 101 5.0 4.0 4.5 2.5 144 chr2L 10554314 intron Trim9 + chr2L 10554386 intron Trim9 + chr2L 10554458 intron Trim9 + chr2L_14_10550001 chr2L_10550001 RAL-320 293 chr2L 10563890 10563947 chr2L 10564003 10564060 11 101 2.5 1.5 2.0 3.7 170 chr2L 10563890 intron Trim9 + chr2L 10563975 intron Trim9 + chr2L 10564060 intron Trim9 + chr2L_11_10560001 chr2L_10560001 RAL-320 294 chr2L 10592821 10592871 chr2L 10600502 10600534 opus 16 7672 1.5 4.0 2.8 4.2 7713 chr2L 10592821 intron Trim9 + chr2L 10596678 intron Trim9 + chr2L 10600534 intron Trim9 + chr2L_16_10595001 chr2L_10595001 RAL-320 295 chr2L 10604177 10604220 chr2L 10604281 10604342 9 118 7.5 0.0 3.8 1.9 165 chr2L 10604177 intron Trim9 + chr2L 10604260 intron Trim9 + chr2L 10604342 intron Trim9 + chr2L_9_10600001 chr2L_10600001 RAL-320 296 chr2L 10620760 10620771 chr2L 10620871 10620893 10 119 1.5 4.5 3.0 2.5 133 chr2L 10620760 intron Trim9 + chr2L 10620826 intron Trim9 + chr2L 10620893 intron Trim9 + chr2L_10_10620001 chr2L_10620001 RAL-320 297 chr2L 10620772 10620784 chr2L 10620864 10620906 6 113 1.5 3.0 2.2 1.9 134 chr2L 10620772 intron Trim9 + chr2L 10620839 intron Trim9 + chr2L 10620906 intron Trim9 + chr2L_6_10620001 chr2L_10620001 RAL-320 298 chr2L 10631191 10631208 chr2L 10631343 10631355 7 150 10.0 0.0 5.0 1.2 164 chr2L 10631191 intron CG7329 - chr2L 10631273 intron CG7329 - chr2L 10631355 intron CG7329 - chr2L_7_10630001 chr2L_10630001 RAL-320 299 chr2L 10631209 10631220 chr2L 10631341 10631372 6 145 7.5 0.0 3.8 1.2 163 chr2L 10631209 intron CG7329 - chr2L 10631290 intron CG7329 - chr2L 10631372 intron CG7329 - chr2L_6_10630001 chr2L_10630001 RAL-320 300 chr2L 10633351 10633383 chr2L 10633437 10633447 7 86 4.5 7.5 6.0 1.0 96 chr2L 10633351 intron CG7329 - chr2L 10633399 intron CG7329 - chr2L 10633447 intron CG7329 - chr2L_7_10630001 chr2L_10630001 RAL-320 301 chr2L 10634742 10634789 chr2L 10634842 10634889 12 98 5.5 2.0 3.8 2.5 147 chr2L 10634742 intron CG7329 - chr2L 10634816 intron CG7329 - chr2L 10634889 intron CG7329 - chr2L_12_10630001 chr2L_10630001 RAL-320 302 chr2L 10640616 10640671 chr2L 10640725 10640760 18 107 5.0 4.0 4.5 3.3 144 chr2L 10640616 exon CG31872 + chr2L 10640688 exon CG31872 + chr2L 10640760 exon CG31872 + chr2L_18_10640001 chr2L_10640001 RAL-320 303 chr2L 10683425 10683466 chr2L 10683524 10683565 7 97 7.0 0.0 3.5 1.6 140 chr2L 10683425 intergenic CG7299 - chr2L 10683495 3` UTR CG7299 - chr2L 10683565 3` UTR CG7299 - chr2L_7_10680001 chr2L_10680001 RAL-320 304 chr2L 10688521 10688566 chr2L 10688617 10688637 10 92 1.5 3.0 2.2 3.1 116 chr2L 10688521 intergenic CG7294 - chr2L 10688579 intergenic CG7294 - chr2L 10688637 intergenic CG7294 - chr2L_10_10685001 chr2L_10685001 RAL-320 305 chr2L 10704924 10704942 chr2L 10705013 10705057 4 94 5.0 0.0 2.5 1.1 133 chr2L 10704924 intron,3` UTR Lip2 -,CG6415 + chr2L 10704990 intron Lip2 - chr2L 10705057 exon Lip2 - chr2L_4_10700001 chr2L_10700001 RAL-320 306 chr2L 10705448 10705454 chr2L 10705540 10705552 4 99 5.5 5.5 5.5 0.6 104 chr2L 10705448 exon Lip2 - chr2L 10705500 intron Lip2 - chr2L 10705552 intron Lip2 - chr2L_4_10705001 chr2L_10705001 RAL-320 307 chr2L 10705459 10705481 chr2L 10705532 10705584 19 93 1.5 4.5 3.0 4.8 125 chr2L 10705459 exon Lip2 - chr2L 10705522 intron Lip2 - chr2L 10705584 intron Lip2 - chr2L_19_10705001 chr2L_10705001 RAL-320 308 chr2L 10772883 10772908 chr2L 10772995 10773004 5 109 2.0 4.0 3.0 1.2 121 chr2L 10772883 3` UTR CG31869 - chr2L 10772944 3` UTR CG31869 - chr2L 10773004 3` UTR CG31869 - chr2L_5_10770001 chr2L_10770001 RAL-320 309 chr2L 10772909 10772915 chr2L 10772986 10773006 4 85 0.5 3.5 2.0 1.3 97 chr2L 10772909 3` UTR CG31869 - chr2L 10772958 3` UTR CG31869 - chr2L 10773006 3` UTR CG31869 - chr2L_4_10770001 chr2L_10770001 RAL-320 310 chr2L 10785046 10785090 chr2L 10785142 10785184 12 91 4.5 5.0 4.8 2.1 138 chr2L 10785046 intron CG31869 - chr2L 10785115 intron CG31869 - chr2L 10785184 intron CG31869 - chr2L_12_10785001 chr2L_10785001 RAL-320 311 chr2L 10789083 10789120 chr2L 10789200 10789236 13 116 6.0 9.0 7.5 1.5 153 chr2L 10789083 intron CG31869 - chr2L 10789160 intron CG31869 - chr2L 10789236 intron CG31869 - chr2L_13_10785001 chr2L_10785001 RAL-320 312 chr2L 10803770 10803796 chr2L 10803876 10803902 15 106 6.5 6.5 6.5 2.0 132 chr2L 10803770 intergenic not near genes chr2L 10803836 intergenic Nos - chr2L 10803902 intergenic Nos - chr2L_15_10800001 chr2L_10800001 RAL-320 313 chr2L 10812041 10812077 chr2L 10812155 10812191 16 112 3.5 2.5 3.0 4.0 150 chr2L 10812041 intron Nos - chr2L 10812116 intron Nos - chr2L 10812191 intron Nos - chr2L_16_10810001 chr2L_10810001 RAL-320 314 chr2L 10850141 10850180 chr2L 10850256 10850269 6 106 3.5 8.5 6.0 0.9 128 chr2L 10850141 5` UTR,5` UTR porin -,CG43129 + chr2L 10850205 5` UTR,5` UTR porin -,CG43129 + chr2L 10850269 5` UTR,intron porin -,CG43129 + chr2L_6_10850001 chr2L_10850001 RAL-320 315 chr2L 10852153 10852182 chr2L 10852261 10852291 8 109 0.5 11.5 6.0 1.1 138 chr2L 10852153 intron CG43129 + chr2L 10852222 intron CG43129 + chr2L 10852291 intron CG43129 + chr2L_8_10850001 chr2L_10850001 RAL-320 316 chr2L 10862862 10862867 chr2L 10864461 10864461 Rt1c 5 1609 6.5 7.5 7.0 0.6 1599 chr2L 10862862 3` UTR CR43807 - chr2L 10863662 intron CR43807 - chr2L 10864461 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 RAL-320 317 chr2L 10891461 10891515 chr2L 10891595 10891597 13 111 5.5 3.5 4.5 2.4 136 chr2L 10891461 intergenic not near genes chr2L 10891529 intergenic not near genes chr2L 10891597 intergenic not near genes chr2L_13_10890001 chr2L_10890001 RAL-320 318 chr2L 10905587 10905630 chr2L 10905692 10905737 7 106 0.5 2.0 1.2 3.2 150 chr2L 10905587 intergenic not near genes chr2L 10905662 intergenic not near genes chr2L 10905737 intergenic not near genes chr2L_7_10905001 chr2L_10905001 RAL-320 319 chr2L 10912975 10913001 chr2L 10913074 10913087 9 97 6.5 2.5 4.5 1.6 112 chr2L 10912975 intergenic not near genes chr2L 10913031 intergenic not near genes chr2L 10913087 intergenic not near genes chr2L_9_10910001 chr2L_10910001 RAL-320 320 chr2L 10946938 10946964 chr2L 10956171 10956179 roo 9 9227 8.0 9.5 8.8 0.9 9241 chr2L 10946938 intron dpr2 - chr2L 10951558 intron dpr2 - chr2L 10956179 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-320 321 chr2L 10946966 10946976 chr2L 10956160 10956201 roo 6 9221 5.5 7.0 6.2 0.8 9235 chr2L 10946966 intron dpr2 - chr2L 10951584 intron dpr2 - chr2L 10956201 intron dpr2 - chr2L_6_10950001 chr2L_10950001 RAL-320 322 chr2L 11135869 11135915 chr2L 11135994 11136040 15 122 6.5 5.5 6.0 2.1 171 chr2L 11135869 3` UTR CG4751 + chr2L 11135954 3` UTR CG4751 + chr2L 11136040 intergenic CG4751 +,hgo + chr2L_15_11135001 chr2L_11135001 RAL-320 323 chr2L 11169569 11169590 chr2L 11169671 11169692 12 100 0.0 7.0 3.5 2.7 123 chr2L 11169569 intron Ca-beta - chr2L 11169630 intron Ca-beta - chr2L 11169692 intron Ca-beta - chr2L_12_11165001 chr2L_11165001 RAL-320 324 chr2L 11182106 11182133 chr2L 11182232 11182271 13 136 3.5 3.5 3.5 2.9 165 chr2L 11182106 intron Ca-beta - chr2L 11182188 intron Ca-beta - chr2L 11182271 intron Ca-beta - chr2L_13_11180001 chr2L_11180001 RAL-320 325 chr2L 11185677 11185703 chr2L 11185770 11185805 13 108 3.0 4.0 3.5 2.9 128 chr2L 11185677 intron Ca-beta - chr2L 11185741 intron Ca-beta - chr2L 11185805 intron Ca-beta - chr2L_13_11185001 chr2L_11185001 RAL-320 326 chr2L 11254010 11254048 chr2L 11254747 11254793 7 743 1.0 7.0 4.0 1.4 783 chr2L 11254010 intron ab + chr2L 11254402 intron ab + chr2L 11254793 intron ab + chr2L_7_11250001 chr2L_11250001 RAL-320 327 chr2L 11255294 11255345 chr2L 11255402 11255428 15 98 7.0 4.5 5.8 2.2 134 chr2L 11255294 intron ab + chr2L 11255361 intron ab + chr2L 11255428 intron ab + chr2L_15_11255001 chr2L_11255001 RAL-320 328 chr2L 11292361 11292408 chr2L 11292459 11292494 10 99 3.0 5.0 4.0 2.0 133 chr2L 11292361 intergenic not near genes chr2L 11292428 intergenic not near genes chr2L 11292494 intergenic not near genes chr2L_10_11290001 chr2L_11290001 RAL-320 329 chr2L 11313106 11313138 chr2L 11313196 11313215 4 88 2.0 7.5 4.8 0.7 109 chr2L 11313106 intergenic not near genes chr2L 11313160 intergenic not near genes chr2L 11313215 intergenic not near genes chr2L_4_11310001 chr2L_11310001 RAL-320 330 chr2L 11364460 11364505 chr2L 11364556 11364601 11 94 6.5 3.5 5.0 1.8 141 chr2L 11364460 intron salr + chr2L 11364530 intron salr + chr2L 11364601 intron salr + chr2L_11_11360001 chr2L_11360001 RAL-320 331 chr2L 11399510 11399535 chr2L 11399607 11399632 11 96 2.5 0.5 1.5 4.4 122 chr2L 11399510 intergenic not near genes chr2L 11399571 intergenic not near genes chr2L 11399632 intergenic not near genes chr2L_11_11395001 chr2L_11395001 RAL-320 332 chr2L 11404764 11404792 chr2L 11404860 11404888 9 96 5.5 1.5 3.5 2.0 124 chr2L 11404764 intergenic not near genes chr2L 11404826 intergenic not near genes chr2L 11404888 intergenic not near genes chr2L_9_11400001 chr2L_11400001 RAL-320 333 chr2L 11537107 11537130 chr2L 11537391 11537409 6 277 6.5 5.5 6.0 0.9 302 chr2L 11537107 intergenic CG43438 + chr2L 11537258 intergenic CG43438 + chr2L 11537409 intergenic not near genes chr2L_6_11535001 chr2L_11535001 RAL-320 334 chr2L 11540590 11540614 chr2L 11548012 11548036 Tabor 4 7422 2.0 9.0 5.5 0.6 7446 chr2L 11540590 intergenic not near genes chr2L 11544313 intergenic not near genes chr2L 11548036 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-320 335 chr2L 11563623 11563668 chr2L 11568847 11568879 copia 15 5220 5.0 9.0 7.0 1.9 5256 chr2L 11563623 intergenic not near genes chr2L 11566251 intergenic not near genes chr2L 11568879 intergenic not near genes chr2L_15_11565001 chr2L_11565001 RAL-320 336 chr2L 11596835 11596844 chr2L 11596935 11596944 4 99 3.5 3.5 3.5 0.9 109 chr2L 11596835 intron kek2 + chr2L 11596890 intron kek2 + chr2L 11596944 intron kek2 + chr2L_4_11595001 chr2L_11595001 RAL-320 337 chr2L 11610526 11610576 chr2L 11610624 11610674 15 96 5.5 3.0 4.2 2.9 148 chr2L 11610526 intron,3` UTR kek2 +,spag4 - chr2L 11610600 intron,3` UTR kek2 +,spag4 - chr2L 11610674 intron,exon kek2 +,spag4 - chr2L_15_11610001 chr2L_11610001 RAL-320 338 chr2L 11657958 11657993 chr2L 11658057 11658089 8 103 5.0 4.5 4.8 1.4 131 chr2L 11657958 3` UTR CG43167 + chr2L 11658024 intergenic CG43167 + chr2L 11658089 intergenic CG43167 + chr2L_8_11655001 chr2L_11655001 RAL-320 339 chr2L 11713486 11713524 chr2L 11720974 11720997 blood 11 7481 6.0 3.5 4.8 1.9 7511 chr2L 11713486 intergenic not near genes chr2L 11717242 intergenic not near genes chr2L 11720997 intergenic CR44143 + chr2L_11_11715001 chr2L_11715001 RAL-320 340 chr2L 11770580 11770632 chr2L 11770687 11770732 11 106 8.0 5.0 6.5 1.5 152 chr2L 11770580 intergenic not near genes chr2L 11770656 intergenic not near genes chr2L 11770732 intergenic not near genes chr2L_11_11770001 chr2L_11770001 RAL-320 341 chr2L 11820439 11820464 chr2L 11820540 11820565 12 101 1.0 7.0 4.0 2.4 126 chr2L 11820439 intron Pde1c - chr2L 11820502 intron Pde1c - chr2L 11820565 intron Pde1c - chr2L_12_11820001 chr2L_11820001 RAL-320 342 chr2L 11841336 11841358 chr2L 11841453 11841469 5 114 4.0 0.0 2.0 1.7 133 chr2L 11841336 intron Pde1c - chr2L 11841402 intron Pde1c - chr2L 11841469 intron Pde1c - chr2L_5_11840001 chr2L_11840001 RAL-320 343 chr2L 11883813 11883867 chr2L 11883925 11883987 12 116 4.0 0.0 2.0 4.0 174 chr2L 11883813 intron Pde1c - chr2L 11883900 intron Pde1c - chr2L 11883987 intron Pde1c - chr2L_12_11880001 chr2L_11880001 RAL-320 344 chr2L 11942666 11942671 chr2L 11942763 11942769 5 98 10.0 2.0 6.0 0.7 103 chr2L 11942666 intergenic not near genes chr2L 11942718 intergenic not near genes chr2L 11942769 intergenic not near genes chr2L_5_11940001 chr2L_11940001 RAL-320 345 chr2L 11946996 11947018 chr2L 11947102 11947104 5 108 4.5 4.0 4.2 1.0 108 chr2L 11946996 3` UTR Cry + chr2L 11947050 3` UTR Cry + chr2L 11947104 3` UTR Cry + chr2L_5_11945001 chr2L_11945001 RAL-320 346 chr2L 12031374 12031380 chr2L 12031474 12031481 5 101 10.0 2.0 6.0 0.7 107 chr2L 12031374 intron dmGlut + chr2L 12031428 intron dmGlut + chr2L 12031481 intron dmGlut + chr2L_5_12030001 chr2L_12030001 RAL-320 347 chr2L 12031382 12031418 chr2L 12031473 12031519 14 100 5.5 2.0 3.8 2.9 137 chr2L 12031382 intron dmGlut + chr2L 12031450 intron dmGlut + chr2L 12031519 intron dmGlut + chr2L_14_12030001 chr2L_12030001 RAL-320 348 chr2L 12067317 12067354 chr2L 12074384 12074426 297 8 7071 7.0 4.0 5.5 1.2 7109 chr2L 12067317 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074426 intergenic not near genes chr2L_8_12070001 chr2L_12070001 RAL-320 349 chr2L 12132702 12132743 chr2L 12132808 12132849 16 105 0.0 1.5 0.8 8.9 147 chr2L 12132702 intron rho-6 - chr2L 12132776 intron rho-6 - chr2L 12132849 intron rho-6 - chr2L_16_12130001 chr2L_12130001 RAL-320 350 chr2L 12224845 12224898 chr2L 12224942 12224986 8 92 2.0 3.0 2.5 2.3 141 chr2L 12224845 intron aret + chr2L 12224916 intron aret + chr2L 12224986 intron aret + chr2L_8_12220001 chr2L_12220001 RAL-320 351 chr2L 12234019 12234058 chr2L 12234129 12234173 13 110 6.0 2.5 4.2 2.5 154 chr2L 12234019 intron aret + chr2L 12234096 intron aret + chr2L 12234173 intron aret + chr2L_13_12230001 chr2L_12230001 RAL-320 352 chr2L 12250682 12250722 chr2L 12250779 12250819 12 95 3.0 4.0 3.5 2.7 137 chr2L 12250682 intron aret + chr2L 12250750 intron aret + chr2L 12250819 intron aret + chr2L_12_12250001 chr2L_12250001 RAL-320 353 chr2L 12272146 12272195 chr2L 12272242 12272291 17 94 3.5 4.0 3.8 3.5 145 chr2L 12272146 intron aret + chr2L 12272218 intron aret + chr2L 12272291 intron aret + chr2L_17_12270001 chr2L_12270001 RAL-320 354 chr2L 12294230 12294252 chr2L 12294332 12294354 7 102 4.0 0.0 2.0 2.3 124 chr2L 12294230 intron aret + chr2L 12294292 intron aret + chr2L 12294354 intron aret + chr2L_7_12290001 chr2L_12290001 RAL-320 355 chr2L 12305392 12305435 chr2L 12305500 12305527 14 103 7.0 4.5 5.8 2.1 135 chr2L 12305392 intron aret + chr2L 12305460 intron aret + chr2L 12305527 intron aret + chr2L_14_12305001 chr2L_12305001 RAL-320 356 chr2L 12397037 12397052 chr2L 12397142 12397157 6 105 8.5 6.0 7.2 0.7 120 chr2L 12397037 3` UTR bru-2 + chr2L 12397097 3` UTR bru-2 + chr2L 12397157 3` UTR bru-2 + chr2L_6_12395001 chr2L_12395001 RAL-320 357 chr2L 12481359 12481401 chr2L 12481461 12481492 5 100 1.0 6.0 3.5 1.1 133 chr2L 12481359 intron bun - chr2L 12481426 intron bun - chr2L 12481492 intron bun - chr2L_5_12480001 chr2L_12480001 RAL-320 358 chr2L 12487869 12487881 chr2L 12487970 12487976 8 100 10.5 5.0 7.8 0.9 107 chr2L 12487869 intron bun - chr2L 12487922 intron bun - chr2L 12487976 intron bun - chr2L_8_12485001 chr2L_12485001 RAL-320 359 chr2L 12487884 12487918 chr2L 12487968 12488019 17 90 3.0 4.0 3.5 3.8 135 chr2L 12487884 intron bun - chr2L 12487952 intron bun - chr2L 12488019 intron bun - chr2L_17_12485001 chr2L_12485001 RAL-320 360 chr2L 12529213 12529256 chr2L 12529385 12529428 11 170 3.0 3.0 3.0 2.8 215 chr2L 12529213 intron bun - chr2L 12529320 intron bun - chr2L 12529428 intron bun - chr2L_11_12525001 chr2L_12525001 RAL-320 361 chr2L 12547442 12547496 chr2L 12547546 12547576 8 96 0.0 0.5 0.2 6.7 134 chr2L 12547442 intergenic not near genes chr2L 12547509 intergenic not near genes chr2L 12547576 intergenic not near genes chr2L_8_12545001 chr2L_12545001 RAL-320 362 chr2L 12558299 12558349 chr2L 12565448 12565498 HMS-Beagle 12 7148 2.0 5.0 3.5 2.7 7199 chr2L 12558299 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565498 intergenic not near genes chr2L_12_12560001 chr2L_12560001 RAL-320 363 chr2L 12625144 12625149 chr2L 12625252 12625262 6 112 8.5 4.5 6.5 0.8 118 chr2L 12625144 intron,intron nub +,Ref2 - chr2L 12625203 intron,intron nub +,Ref2 - chr2L 12625262 intron,intron nub +,Ref2 - chr2L_6_12625001 chr2L_12625001 RAL-320 364 chr2L 12625152 12625191 chr2L 12625250 12625304 15 104 1.0 4.5 2.8 3.9 152 chr2L 12625152 intron,intron nub +,Ref2 - chr2L 12625228 intron,intron nub +,Ref2 - chr2L 12625304 intron,intron nub +,Ref2 - chr2L_15_12625001 chr2L_12625001 RAL-320 365 chr2L 12638759 12638808 chr2L 12638882 12638931 18 123 5.0 4.5 4.8 3.1 172 chr2L 12638759 intron Ref2 - chr2L 12638845 intron Ref2 - chr2L 12638931 intron Ref2 - chr2L_18_12635001 chr2L_12635001 RAL-320 366 chr2L 12643151 12643190 chr2L 12643248 12643287 5 97 0.0 0.0 0.0 5.0 136 chr2L 12643151 intron Ref2 - chr2L 12643219 intron Ref2 - chr2L 12643287 intron Ref2 - chr2L_5_12640001 chr2L_12640001 RAL-320 367 chr2L 12684207 12684250 chr2L 12684300 12684351 16 100 5.0 7.5 6.2 2.2 144 chr2L 12684207 intron pdm2 + chr2L 12684279 intron pdm2 + chr2L 12684351 intron pdm2 + chr2L_16_12680001 chr2L_12680001 RAL-320 368 chr2L 12728904 12728949 chr2L 12729163 12729164 pogo 17 254 7.5 3.5 5.5 2.6 260 chr2L 12728904 intron MRP + chr2L 12729034 intron MRP + chr2L 12729164 intron MRP + chr2L_17_12725001 chr2L_12725001 RAL-320 369 chr2L 12731051 12731087 chr2L 12735823 12735874 F-element 10 4784 5.0 4.0 4.5 1.8 4823 chr2L 12731051 intron MRP + chr2L 12733462 intron MRP + chr2L 12735874 intron MRP + chr2L_10_12730001 chr2L_12730001 RAL-320 370 chr2L 12739160 12739198 chr2L 12743961 12743999 Doc 17 4799 4.5 7.5 6.0 2.4 4839 chr2L 12739160 exon MRP + chr2L 12741580 intron MRP + chr2L 12743999 exon MRP + chr2L_17_12740001 chr2L_12740001 RAL-320 371 chr2L 12751289 12751341 chr2L 12751392 12751444 21 95 0.5 4.5 2.5 6.0 155 chr2L 12751289 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751444 intergenic not near genes chr2L_21_12750001 chr2L_12750001 RAL-320 372 chr2L 12753956 12753998 chr2L 12754080 12754122 12 119 6.5 7.0 6.8 1.5 166 chr2L 12753956 intergenic not near genes chr2L 12754039 intergenic not near genes chr2L 12754122 intergenic not near genes chr2L_12_12750001 chr2L_12750001 RAL-320 373 chr2L 12763806 12763869 chr2L 12764038 12764089 BS 10 227 0.0 0.0 0.0 10.0 283 chr2L 12763806 intergenic not near genes chr2L 12763948 intergenic not near genes chr2L 12764089 intergenic not near genes chr2L_10_12760001 chr2L_12760001 RAL-320 374 chr2L 12766751 12766775 chr2L 12766849 12766873 7 98 4.5 4.5 4.5 1.3 122 chr2L 12766751 intergenic not near genes chr2L 12766812 intergenic not near genes chr2L 12766873 intergenic not near genes chr2L_7_12765001 chr2L_12765001 RAL-320 375 chr2L 12781780 12781815 chr2L 12789250 12789284 Quasimodo 12 7468 12.5 4.5 8.5 1.3 7504 chr2L 12781780 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789284 intergenic not near genes chr2L_12_12785001 chr2L_12785001 RAL-320 376 chr2L 12791589 12791634 chr2L 12795284 12795293 F-element 18 3684 3.0 6.0 4.5 3.3 3704 chr2L 12791589 intergenic not near genes chr2L 12793441 intergenic not near genes chr2L 12795293 intergenic not near genes chr2L_18_12790001 chr2L_12790001 RAL-320 377 chr2L 12861677 12861723 chr2L 12863164 12863206 hobo 16 1482 5.5 5.5 5.5 2.5 1529 chr2L 12861677 intergenic not near genes chr2L 12862442 intergenic not near genes chr2L 12863206 intergenic not near genes chr2L_16_12860001 chr2L_12860001 RAL-320 378 chr2L 12905458 12905499 chr2L 12905562 12905603 11 104 3.0 3.5 3.2 2.6 145 chr2L 12905458 intergenic not near genes chr2L 12905530 intergenic not near genes chr2L 12905603 intergenic not near genes chr2L_11_12905001 chr2L_12905001 RAL-320 379 chr2L 12933837 12933883 chr2L 12941318 12941354 blood 10 7479 4.5 3.5 4.0 2.0 7517 chr2L 12933837 intergenic not near genes chr2L 12937596 intergenic not near genes chr2L 12941354 intergenic not near genes chr2L_10_12935001 chr2L_12935001 RAL-320 380 chr2L 12945954 12946004 chr2L 12946054 12946086 14 84 4.5 3.0 3.8 2.9 132 chr2L 12945954 intergenic not near genes chr2L 12946020 intergenic not near genes chr2L 12946086 intergenic not near genes chr2L_14_12945001 chr2L_12945001 RAL-320 381 chr2L 13036224 13036270 chr2L 13036486 13036532 X-element 20 260 3.5 3.5 3.5 4.4 308 chr2L 13036224 intron CG9932 - chr2L 13036378 intron CG9932 - chr2L 13036532 intron CG9932 - chr2L_20_13035001 chr2L_13035001 RAL-320 382 chr2L 13036798 13036824 chr2L 13037254 13037282 6 451 3.5 3.5 3.5 1.3 484 chr2L 13036798 intron CG9932 - chr2L 13037040 intron CG9932 - chr2L 13037282 intron CG9932 - chr2L_6_13035001 chr2L_13035001 RAL-320 383 chr2L 13043383 13043435 chr2L 13043482 13043533 9 98 1.5 3.0 2.2 2.8 150 chr2L 13043383 intron CG9932 - chr2L 13043458 intron CG9932 - chr2L 13043533 intron CG9932 - chr2L_9_13040001 chr2L_13040001 RAL-320 384 chr2L 13147930 13147957 chr2L 13148031 13148058 6 100 5.0 4.5 4.8 1.0 128 chr2L 13147930 intergenic not near genes chr2L 13147994 intergenic not near genes chr2L 13148058 intergenic not near genes chr2L_6_13145001 chr2L_13145001 RAL-320 385 chr2L 13152220 13152240 chr2L 13152318 13152324 4 94 9.0 1.5 5.2 0.6 104 chr2L 13152220 intergenic not near genes chr2L 13152272 intergenic not near genes chr2L 13152324 intergenic not near genes chr2L_4_13150001 chr2L_13150001 RAL-320 386 chr2L 13152242 13152251 chr2L 13152310 13152335 4 76 8.0 1.0 4.5 0.7 93 chr2L 13152242 intergenic not near genes chr2L 13152288 intergenic not near genes chr2L 13152335 intergenic not near genes chr2L_4_13150001 chr2L_13150001 RAL-320 387 chr2L 13154096 13154125 chr2L 13154194 13154222 14 98 3.5 0.0 1.8 5.0 126 chr2L 13154096 intergenic not near genes chr2L 13154159 intergenic not near genes chr2L 13154222 intergenic not near genes chr2L_14_13150001 chr2L_13150001 RAL-320 388 chr2L 13205577 13205614 chr2L 13205675 13205719 9 97 2.5 4.0 3.2 2.1 142 chr2L 13205577 intron Pect + chr2L 13205648 intron Pect + chr2L 13205719 intron Pect + chr2L_9_13205001 chr2L_13205001 RAL-320 389 chr2L 13231868 13231910 chr2L 13231999 13232041 13 130 3.5 8.5 6.0 1.9 173 chr2L 13231868 intergenic Prosalpha6T + chr2L 13231954 intergenic Prosalpha6T + chr2L 13232041 5` UTR Prosalpha6T + chr2L_13_13230001 chr2L_13230001 RAL-320 390 chr2L 13266358 13266412 chr2L 13266466 13266520 19 105 3.5 4.0 3.8 4.0 162 chr2L 13266358 intron CG44085 + chr2L 13266439 intron CG44085 + chr2L 13266520 intron CG44085 + chr2L_19_13265001 chr2L_13265001 RAL-320 391 chr2L 13341749 13341791 chr2L 13342382 13342408 4 629 8.0 4.0 6.0 0.6 659 chr2L 13341749 intergenic not near genes chr2L 13342078 intergenic not near genes chr2L 13342408 intergenic not near genes chr2L_4_13340001 chr2L_13340001 RAL-320 392 chr2L 13362838 13362861 chr2L 13363057 13363080 4 219 4.5 2.5 3.5 0.9 242 chr2L 13362838 intergenic Nnp-1 - chr2L 13362959 intergenic Nnp-1 - chr2L 13363080 intergenic Nnp-1 - chr2L_4_13360001 chr2L_13360001 RAL-320 393 chr2L 13405634 13405676 chr2L 13410444 13410493 Doc 12 4814 3.0 7.0 5.0 2.0 4859 chr2L 13405634 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410493 intron CG7110 + chr2L_12_13405001 chr2L_13405001 RAL-320 394 chr2L 13449447 13449494 chr2L 13456903 13456945 Quasimodo 21 7452 5.0 4.5 4.8 3.6 7498 chr2L 13449447 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456945 intron CG42784 + chr2L_21_13450001 chr2L_13450001 RAL-320 395 chr2L 13481444 13481477 chr2L 13482071 13482077 jockey 12 624 4.5 6.5 5.5 1.8 633 chr2L 13481444 intron CG42784 + chr2L 13481760 intron CG42784 + chr2L 13482077 intron CG42784 + chr2L_12_13480001 chr2L_13480001 RAL-320 396 chr2L 13522117 13522153 chr2L 13527655 13527688 Transpac 9 5536 6.5 6.0 6.2 1.2 5571 chr2L 13522117 intron B4 - chr2L 13524902 intron B4 - chr2L 13527688 intron B4 - chr2L_9_13520001 chr2L_13520001 RAL-320 397 chr2L 13560382 13560419 chr2L 13565223 13565224 F-element 7 4836 6.0 3.0 4.5 1.3 4842 chr2L 13560382 intron kuz + chr2L 13562803 intron kuz + chr2L 13565224 intron kuz + chr2L_7_13560001 chr2L_13560001 RAL-320 398 chr2L 13622122 13622170 chr2L 13622235 13622255 21 108 6.0 2.5 4.2 4.0 133 chr2L 13622122 intron kuz + chr2L 13622188 intron kuz + chr2L 13622255 intron kuz + chr2L_21_13620001 chr2L_13620001 RAL-320 399 chr2L 13703838 13703851 chr2L 13703965 13703978 6 124 12.5 5.0 8.8 0.6 140 chr2L 13703838 intron CG31814 - chr2L 13703908 intron CG31814 - chr2L 13703978 intron CG31814 - chr2L_6_13700001 chr2L_13700001 RAL-320 400 chr2L 13703855 13703890 chr2L 13703962 13704017 13 117 7.5 5.0 6.2 1.8 162 chr2L 13703855 intron CG31814 - chr2L 13703936 intron CG31814 - chr2L 13704017 intron CG31814 - chr2L_13_13700001 chr2L_13700001 RAL-320 401 chr2L 13713539 13713572 chr2L 13713635 13713668 9 96 2.5 0.0 1.2 4.1 129 chr2L 13713539 intron CG31814 - chr2L 13713604 intron CG31814 - chr2L 13713668 intron CG31814 - chr2L_9_13710001 chr2L_13710001 RAL-320 402 chr2L 13714826 13714874 chr2L 13714991 13715004 19 162 0.0 5.5 2.8 5.0 178 chr2L 13714826 intron CG31814 - chr2L 13714915 intron CG31814 - chr2L 13715004 intron CG31814 - chr2L_19_13710001 chr2L_13710001 RAL-320 403 chr2L 13733757 13733784 chr2L 13733895 13733902 6 135 4.0 7.5 5.8 0.9 145 chr2L 13733757 intergenic not near genes chr2L 13733830 intergenic not near genes chr2L 13733902 intergenic not near genes chr2L_6_13730001 chr2L_13730001 RAL-320 404 chr2L 13761810 13761832 chr2L 13762908 13762913 Doc 6 1116 7.5 3.5 5.5 0.9 1103 chr2L 13761810 intron TM9SF4 + chr2L 13762362 intron TM9SF4 + chr2L 13762913 intron TM9SF4 + chr2L_6_13760001 chr2L_13760001 RAL-320 405 chr2L 13853069 13853114 chr2L 13862239 13862269 roo 12 9167 6.5 0.0 3.2 2.9 9200 chr2L 13853069 intron CenG1A + chr2L 13857669 intron CenG1A + chr2L 13862269 intron CenG1A + chr2L_12_13855001 chr2L_13855001 RAL-320 406 chr2L 13913572 13913604 chr2L 13913705 13913737 15 132 9.0 9.0 9.0 1.5 165 chr2L 13913572 intergenic not near genes chr2L 13913654 intergenic not near genes chr2L 13913737 intergenic not near genes chr2L_15_13910001 chr2L_13910001 RAL-320 407 chr2L 13944408 13944434 chr2L 13944548 13944574 10 140 0.0 6.0 3.0 2.5 166 chr2L 13944408 intron Ance-3 + chr2L 13944491 intron Ance-3 + chr2L 13944574 intron Ance-3 + chr2L_10_13940001 chr2L_13940001 RAL-320 408 chr2L 13988260 13988304 chr2L 13988367 13988411 12 103 4.5 4.5 4.5 2.2 151 chr2L 13988260 intron rk - chr2L 13988336 intron rk - chr2L 13988411 intron rk - chr2L_12_13985001 chr2L_13985001 RAL-320 409 chr2L 14222282 14222333 chr2L 14222389 14222440 14 101 5.5 4.5 5.0 2.3 158 chr2L 14222282 intron Dyrk2 - chr2L 14222361 intron Dyrk2 - chr2L 14222440 intron Dyrk2 - chr2L_14_14220001 chr2L_14220001 RAL-320 410 chr2L 14236218 14236269 chr2L 14236335 14236386 11 113 3.0 1.0 2.0 3.7 168 chr2L 14236218 5` UTR CR44728 + chr2L 14236302 5` UTR CR44728 + chr2L 14236386 intergenic CR44728 + chr2L_11_14235001 chr2L_14235001 RAL-320 411 chr2L 14333906 14333929 chr2L 14334016 14334049 6 118 4.5 4.0 4.2 1.2 143 chr2L 14333906 intergenic ms(2)34Fe +,CG33090 + chr2L 14333978 intergenic ms(2)34Fe +,CG33090 + chr2L 14334049 intergenic CG33090 +,ms(2)34Fe + chr2L_6_14330001 chr2L_14330001 RAL-320 412 chr2L 14340133 14340179 chr2L 14340255 14340301 7 117 8.5 4.5 6.5 0.9 168 chr2L 14340133 intron CG33090 + chr2L 14340217 intron CG33090 + chr2L 14340301 intron CG33090 + chr2L_7_14340001 chr2L_14340001 RAL-320 413 chr2L 14367843 14367891 chr2L 14367941 14367985 19 96 4.0 6.5 5.2 3.1 142 chr2L 14367843 intergenic not near genes chr2L 14367914 intergenic not near genes chr2L 14367985 intergenic not near genes chr2L_19_14365001 chr2L_14365001 RAL-320 414 chr2L 14378630 14378679 chr2L 14378729 14378757 17 95 3.5 1.0 2.2 5.3 127 chr2L 14378630 3` UTR ppk - chr2L 14378694 3` UTR ppk - chr2L 14378757 3` UTR ppk - chr2L_17_14375001 chr2L_14375001 RAL-320 415 chr2L 14396182 14396232 chr2L 14398958 14399008 19 2775 17.0 19.5 18.2 1.0 2826 chr2L 14396182 intron elB - chr2L 14397595 intron elB - chr2L 14399008 intron elB - chr2L_19_14395001 chr2L_14395001 RAL-320 416 chr2L 14396032 14396058 chr2L 14399121 14399147 5 3089 29.5 34.5 32.0 0.2 3115 chr2L 14396032 intron elB - chr2L 14397590 intron elB - chr2L 14399147 intron elB - chr2L_5_14395001 chr2L_14395001 RAL-320 417 chr2L 14396029 14396082 chr2L 14399149 14399171 10 3094 40.0 35.5 37.8 0.3 3142 chr2L 14396029 intron elB - chr2L 14397600 intron elB - chr2L 14399171 intron elB - chr2L_10_14395001 chr2L_14395001 RAL-320 418 chr2L 14462716 14462823 chr2L 14462823 14462939 5 113 0.0 0.0 0.0 5.0 223 chr2L 14462716 intergenic not near genes chr2L 14462828 intergenic not near genes chr2L 14462939 intergenic not near genes chr2L_5_14460001 chr2L_14460001 RAL-320 419 chr2L 14549132 14549178 chr2L 14549228 14549274 20 95 6.0 7.5 6.8 2.6 142 chr2L 14549132 intergenic CG4218 - chr2L 14549203 intergenic CG4218 - chr2L 14549274 intergenic CG4218 - chr2L_20_14545001 chr2L_14545001 RAL-320 420 chr2L 14564223 14564229 chr2L 14564269 14564280 5 57 2.0 4.0 3.0 1.2 57 chr2L 14564223 intergenic CG3473 - chr2L 14564252 intergenic not near genes chr2L 14564280 intergenic not near genes chr2L_5_14560001 chr2L_14560001 RAL-320 421 chr2L 14570702 14570718 chr2L 14570803 14570819 6 101 0.0 6.0 3.0 1.5 117 chr2L 14570702 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570819 intergenic not near genes chr2L_6_14570001 chr2L_14570001 RAL-320 422 chr2L 14576706 14576727 chr2L 14576794 14576811 9 99 3.5 7.0 5.2 1.5 105 chr2L 14576706 5` UTR CR44856 + chr2L 14576758 5` UTR CR44856 + chr2L 14576811 5` UTR CR44856 + chr2L_9_14575001 chr2L_14575001 RAL-320 423 chr2L 14588369 14588404 chr2L 14588538 14588578 11 170 6.0 3.5 4.8 1.9 209 chr2L 14588369 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588578 intergenic CG42680 - chr2L_11_14585001 chr2L_14585001 RAL-320 424 chr2L 14686289 14686315 chr2L 14686375 14686413 4 95 7.0 9.5 8.2 0.4 124 chr2L 14686289 intron osp - chr2L 14686351 intron osp - chr2L 14686413 intron osp - chr2L_4_14685001 chr2L_14685001 RAL-320 425 chr2L 14694253 14694283 chr2L 14694379 14694427 10 142 3.5 4.0 3.8 2.1 174 chr2L 14694253 intergenic not near genes chr2L 14694340 intergenic not near genes chr2L 14694427 intergenic not near genes chr2L_10_14690001 chr2L_14690001 RAL-320 426 chr2L 14707196 14707236 chr2L 14707327 14707352 15 137 9.5 2.5 6.0 2.1 156 chr2L 14707196 intergenic not near genes chr2L 14707274 intergenic not near genes chr2L 14707352 intergenic not near genes chr2L_15_14705001 chr2L_14705001 RAL-320 427 chr2L 14707575 14707617 chr2L 14708589 14708642 15 1022 11.5 20.5 16.0 0.9 1067 chr2L 14707575 intergenic not near genes chr2L 14708108 intergenic not near genes chr2L 14708642 intergenic not near genes chr2L_15_14705001 chr2L_14705001 RAL-320 428 chr2L 14706736 14706780 chr2L 14708979 14709022 16 2242 32.0 36.5 34.2 0.5 2286 chr2L 14706736 intergenic not near genes chr2L 14707879 intergenic not near genes chr2L 14709022 intergenic not near genes chr2L_16_14705001 chr2L_14705001 RAL-320 429 chr2L 14726563 14726575 chr2L 14726665 14726677 7 101 5.5 12.5 9.0 0.7 114 chr2L 14726563 intron CG42685 - chr2L 14726620 intron CG42685 - chr2L 14726677 intron CG42685 - chr2L_7_14725001 chr2L_14725001 RAL-320 430 chr2L 14747524 14747535 chr2L 14747625 14747642 5 104 7.0 10.0 8.5 0.5 118 chr2L 14747524 intergenic not near genes chr2L 14747583 intergenic not near genes chr2L 14747642 intergenic not near genes chr2L_5_14745001 chr2L_14745001 RAL-320 431 chr2L 14747536 14747560 chr2L 14747618 14747657 5 96 5.0 6.5 5.8 0.7 121 chr2L 14747536 intergenic not near genes chr2L 14747596 intergenic not near genes chr2L 14747657 intergenic not near genes chr2L_5_14745001 chr2L_14745001 RAL-320 432 chr2L 14778798 14778835 chr2L 14779100 14779142 6 304 5.0 5.0 5.0 1.0 344 chr2L 14778798 intergenic not near genes chr2L 14778970 intergenic not near genes chr2L 14779142 intergenic not near genes chr2L_6_14775001 chr2L_14775001 RAL-320 433 chr2L 14803893 14803905 chr2L 14809098 14809102 copia 4 5207 10.0 7.0 8.5 0.4 5209 chr2L 14803893 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809102 intergenic not near genes chr2L_4_14805001 chr2L_14805001 RAL-320 434 chr2L 14839743 14839777 chr2L 14839827 14839873 12 92 5.0 4.5 4.8 2.1 130 chr2L 14839743 intergenic not near genes chr2L 14839808 intergenic not near genes chr2L 14839873 intergenic not near genes chr2L_12_14835001 chr2L_14835001 RAL-320 435 chr2L 14840957 14841010 chr2L 14841065 14841117 15 103 2.5 3.0 2.8 3.9 160 chr2L 14840957 3` UTR CR43805 - chr2L 14841037 3` UTR CR43805 - chr2L 14841117 3` UTR CR43805 - chr2L_15_14840001 chr2L_14840001 RAL-320 436 chr2L 14853264 14853313 chr2L 14853574 14853624 16 305 6.0 3.0 4.5 2.9 360 chr2L 14853264 intergenic not near genes chr2L 14853444 intergenic not near genes chr2L 14853624 intergenic not near genes chr2L_16_14850001 chr2L_14850001 RAL-320 437 chr2L 14889943 14889983 chr2L 14890384 14890427 jockey 16 443 3.5 4.0 3.8 3.3 484 chr2L 14889943 intergenic not near genes chr2L 14890185 intergenic not near genes chr2L 14890427 intergenic not near genes chr2L_16_14890001 chr2L_14890001 RAL-320 438 chr2L 14984372 14984404 chr2L 14991977 14992025 opus 9 7619 6.0 4.0 5.0 1.5 7653 chr2L 14984372 intron mol - chr2L 14988198 intron mol - chr2L 14992025 intron mol - chr2L_9_14985001 chr2L_14985001 RAL-320 439 chr2L 15000862 15000906 chr2L 15000968 15001013 5 111 34.0 23.5 28.8 0.2 151 chr2L 15000862 intergenic not near genes chr2L 15000938 intergenic not near genes chr2L 15001013 intergenic not near genes chr2L_5_15000001 chr2L_15000001 RAL-320 440 chr2L 15013132 15013175 chr2L 15013256 15013282 5 115 6.0 7.5 6.8 0.6 150 chr2L 15013132 intergenic CR43856 - chr2L 15013207 intergenic not near genes chr2L 15013282 intergenic not near genes chr2L_5_15010001 chr2L_15010001 RAL-320 441 chr2L 15014604 15014649 chr2L 15014702 15014748 7 94 1.0 2.0 1.5 2.8 144 chr2L 15014604 intergenic not near genes chr2L 15014676 intergenic not near genes chr2L 15014748 intergenic not near genes chr2L_7_15010001 chr2L_15010001 RAL-320 442 chr2L 15021422 15021472 chr2L 15021518 15021557 19 95 3.0 3.5 3.2 4.5 135 chr2L 15021422 intron GABA-B-R1 + chr2L 15021490 intron GABA-B-R1 + chr2L 15021557 intron GABA-B-R1 + chr2L_19_15020001 chr2L_15020001 RAL-320 443 chr2L 15044709 15044718 chr2L 15044805 15044814 5 96 5.0 0.0 2.5 1.4 105 chr2L 15044709 intergenic ck - chr2L 15044762 intergenic ck - chr2L 15044814 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-320 444 chr2L 15044725 15044733 chr2L 15044802 15044812 6 90 4.0 0.0 2.0 2.0 87 chr2L 15044725 intergenic ck - chr2L 15044768 intergenic ck - chr2L 15044812 intergenic ck - chr2L_6_15040001 chr2L_15040001 RAL-320 445 chr2L 15078048 15078095 chr2L 15078156 15078203 13 101 1.5 4.0 2.8 3.4 155 chr2L 15078048 intron CG15270 + chr2L 15078126 intron CG15270 + chr2L 15078203 intron CG15270 + chr2L_13_15075001 chr2L_15075001 RAL-320 446 chr2L 15103845 15103862 chr2L 15103962 15103979 7 117 10.0 10.5 10.2 0.6 134 chr2L 15103845 intergenic not near genes chr2L 15103912 intergenic not near genes chr2L 15103979 intergenic not near genes chr2L_7_15100001 chr2L_15100001 RAL-320 447 chr2L 15122791 15122805 chr2L 15122891 15122903 8 100 0.5 5.0 2.8 2.1 112 chr2L 15122791 intergenic not near genes chr2L 15122847 intergenic not near genes chr2L 15122903 intergenic not near genes chr2L_8_15120001 chr2L_15120001 RAL-320 448 chr2L 15227700 15227731 chr2L 15227795 15227817 4 91 5.0 4.0 4.5 0.7 117 chr2L 15227700 intergenic not near genes chr2L 15227758 intergenic not near genes chr2L 15227817 intergenic not near genes chr2L_4_15225001 chr2L_15225001 RAL-320 449 chr2L 15309349 15309380 chr2L 15309461 15309503 10 121 2.5 2.5 2.5 2.9 154 chr2L 15309349 intergenic not near genes chr2L 15309426 intergenic not near genes chr2L 15309503 intergenic not near genes chr2L_10_15305001 chr2L_15305001 RAL-320 450 chr2L 15350885 15350897 chr2L 15350988 15351001 6 104 6.0 5.0 5.5 0.9 116 chr2L 15350885 intergenic not near genes chr2L 15350943 intergenic not near genes chr2L 15351001 intergenic not near genes chr2L_6_15350001 chr2L_15350001 RAL-320 451 chr2L 15350901 15350933 chr2L 15350984 15351037 18 101 4.0 4.5 4.2 3.5 136 chr2L 15350901 intergenic not near genes chr2L 15350969 intergenic not near genes chr2L 15351037 intergenic not near genes chr2L_18_15350001 chr2L_15350001 RAL-320 452 chr2L 15354905 15354952 chr2L 15355014 15355045 9 104 4.5 3.0 3.8 1.9 140 chr2L 15354905 intergenic not near genes chr2L 15354975 intergenic not near genes chr2L 15355045 intergenic not near genes chr2L_9_15350001 chr2L_15350001 RAL-320 453 chr2L 15355691 15355745 chr2L 15355789 15355822 8 91 1.0 6.5 3.8 1.7 131 chr2L 15355691 intergenic not near genes chr2L 15355756 intergenic not near genes chr2L 15355822 intergenic not near genes chr2L_8_15355001 chr2L_15355001 RAL-320 454 chr2L 15375810 15375845 chr2L 15375942 15375977 10 132 2.5 5.0 3.8 2.1 167 chr2L 15375810 intergenic not near genes chr2L 15375894 intergenic not near genes chr2L 15375977 intergenic not near genes chr2L_10_15375001 chr2L_15375001 RAL-320 455 chr2L 15403223 15403270 chr2L 15403321 15403328 4 86 3.0 0.0 1.5 1.6 105 chr2L 15403223 intergenic not near genes chr2L 15403276 intergenic not near genes chr2L 15403328 intergenic not near genes chr2L_4_15400001 chr2L_15400001 RAL-320 456 chr2L 15446029 15446084 chr2L 15453518 15453566 blood 14 7485 2.5 3.0 2.8 3.7 7537 chr2L 15446029 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453566 intergenic not near genes chr2L_14_15445001 chr2L_15445001 RAL-320 457 chr2L 15499891 15499945 chr2L 15499999 15500052 6 106 0.0 5.0 2.5 1.7 161 chr2L 15499891 intron lace + chr2L 15499972 intron lace + chr2L 15500052 intron lace + chr2L_6_15495001 chr2L_15495001 RAL-320 458 chr2L 15527411 15527459 chr2L 15527509 15527558 13 96 1.5 7.0 4.2 2.5 147 chr2L 15527411 intergenic not near genes chr2L 15527484 intergenic not near genes chr2L 15527558 intergenic not near genes chr2L_13_15525001 chr2L_15525001 RAL-320 459 chr2L 15540838 15540853 chr2L 15540962 15540977 9 124 6.0 5.5 5.8 1.3 139 chr2L 15540838 intergenic not near genes chr2L 15540908 intergenic not near genes chr2L 15540977 intergenic not near genes chr2L_9_15540001 chr2L_15540001 RAL-320 460 chr2L 15586392 15586437 chr2L 15593464 15593509 297 17 7067 5.0 3.0 4.0 3.4 7117 chr2L 15586392 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593509 intergenic not near genes chr2L_17_15585001 chr2L_15585001 RAL-320 461 chr2L 15598773 15598793 chr2L 15598872 15598892 9 98 7.0 0.0 3.5 2.0 119 chr2L 15598773 intergenic not near genes chr2L 15598832 intergenic not near genes chr2L 15598892 intergenic not near genes chr2L_9_15595001 chr2L_15595001 RAL-320 462 chr2L 15636641 15636692 chr2L 15636762 15636814 11 119 2.0 1.5 1.8 3.9 173 chr2L 15636641 intergenic not near genes chr2L 15636728 intergenic not near genes chr2L 15636814 intergenic not near genes chr2L_11_15635001 chr2L_15635001 RAL-320 463 chr2L 15737283 15737337 chr2L 15737392 15737446 13 105 4.5 5.5 5.0 2.2 163 chr2L 15737283 intron CycE - chr2L 15737364 intron CycE - chr2L 15737446 intron CycE - chr2L_13_15735001 chr2L_15735001 RAL-320 464 chr2L 15755708 15755753 chr2L 15755804 15755849 16 95 3.5 5.5 4.5 2.9 141 chr2L 15755708 3` UTR l(2)35Df + chr2L 15755778 3` UTR l(2)35Df + chr2L 15755849 3` UTR l(2)35Df + chr2L_16_15755001 chr2L_15755001 RAL-320 465 chr2L 15819512 15819563 chr2L 15819643 15819692 20 126 4.0 7.0 5.5 3.1 180 chr2L 15819512 intergenic not near genes chr2L 15819602 intergenic not near genes chr2L 15819692 intergenic not near genes chr2L_20_15815001 chr2L_15815001 RAL-320 466 chr2L 15821068 15821080 chr2L 15821188 15821200 4 119 0.0 2.0 1.0 2.0 132 chr2L 15821068 intergenic not near genes chr2L 15821134 intergenic not near genes chr2L 15821200 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-320 467 chr2L 15823333 15823383 chr2L 15823429 15823473 27 92 2.0 7.0 4.5 4.9 140 chr2L 15823333 intergenic CR44601 - chr2L 15823403 intergenic CR44601 - chr2L 15823473 intergenic not near genes chr2L_27_15820001 chr2L_15820001 RAL-320 468 chr2L 15863917 15863939 chr2L 15864017 15864039 9 99 5.0 1.5 3.2 2.1 122 chr2L 15863917 intergenic CR42791 + chr2L 15863978 intergenic CR42791 + chr2L 15864039 intergenic CR42791 + chr2L_9_15860001 chr2L_15860001 RAL-320 469 chr2L 15950366 15950406 chr2L 15950464 15950489 12 94 0.5 2.5 1.5 4.8 123 chr2L 15950366 intron beat-Ib - chr2L 15950428 intron beat-Ib - chr2L 15950489 intron beat-Ib - chr2L_12_15950001 chr2L_15950001 RAL-320 470 chr2L 15954165 15954211 chr2L 15954264 15954307 8 98 4.0 6.0 5.0 1.3 142 chr2L 15954165 intron beat-Ib - chr2L 15954236 intron beat-Ib - chr2L 15954307 intron beat-Ib - chr2L_8_15950001 chr2L_15950001 RAL-320 471 chr2L 15956017 15956045 chr2L 15957491 15957532 hobo 16 1480 6.5 9.0 7.8 1.8 1515 chr2L 15956017 intron beat-Ib - chr2L 15956774 intron beat-Ib - chr2L 15957532 intron beat-Ib - chr2L_16_15955001 chr2L_15955001 RAL-320 472 chr2L 15962038 15962077 chr2L 15962156 15962195 14 116 6.0 4.5 5.2 2.3 157 chr2L 15962038 5` UTR beat-Ib - chr2L 15962116 5` UTR beat-Ib - chr2L 15962195 5` UTR beat-Ib - chr2L_14_15960001 chr2L_15960001 RAL-320 473 chr2L 16001444 16001491 chr2L 16001552 16001598 12 107 0.0 5.0 2.5 3.4 154 chr2L 16001444 intron beat-Ic + chr2L 16001521 intron beat-Ic + chr2L 16001598 intron beat-Ic + chr2L_12_16000001 chr2L_16000001 RAL-320 474 chr2L 16005549 16005590 chr2L 16005650 16005707 4 108 2.0 0.0 1.0 2.0 158 chr2L 16005549 intron beat-Ic + chr2L 16005628 intron beat-Ic + chr2L 16005707 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-320 475 chr2L 16008685 16008691 chr2L 16008806 16008812 6 121 0.0 2.0 1.0 3.0 127 chr2L 16008685 intron beat-Ic + chr2L 16008748 intron beat-Ic + chr2L 16008812 intron beat-Ic + chr2L_6_16005001 chr2L_16005001 RAL-320 476 chr2L 16018674 16018705 chr2L 16018812 16018843 8 137 4.0 2.0 3.0 2.0 169 chr2L 16018674 intron beat-Ic + chr2L 16018758 intron beat-Ic + chr2L 16018843 intron beat-Ic + chr2L_8_16015001 chr2L_16015001 RAL-320 477 chr2L 16045433 16045440 chr2L 16045603 16045610 5 170 4.5 0.0 2.2 1.6 177 chr2L 16045433 intron,intron BicC +,CG45084 + chr2L 16045522 intron,intron BicC +,CG45084 + chr2L 16045610 intron,intron BicC +,CG45084 + chr2L_5_16045001 chr2L_16045001 RAL-320 478 chr2L 16045442 16045470 chr2L 16045601 16045640 6 167 1.0 0.0 0.5 4.0 198 chr2L 16045442 intron,intron BicC +,CG45084 + chr2L 16045541 intron,intron BicC +,CG45084 + chr2L 16045640 intron,intron BicC +,CG45084 + chr2L_6_16045001 chr2L_16045001 RAL-320 479 chr2L 16056143 16056156 chr2L 16056234 16056252 6 93 1.0 2.0 1.5 2.4 109 chr2L 16056143 intron beat-Ia + chr2L 16056198 intron beat-Ia + chr2L 16056252 5` UTR beat-Ia + chr2L_6_16055001 chr2L_16055001 RAL-320 480 chr2L 16063453 16063473 chr2L 16063551 16063555 4 94 5.0 0.0 2.5 1.1 102 chr2L 16063453 intron beat-Ia + chr2L 16063504 intron beat-Ia + chr2L 16063555 intron beat-Ia + chr2L_4_16060001 chr2L_16060001 RAL-320 481 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 13 145889 12.0 21.5 16.8 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-320 482 chr2L 16106533 16106583 chr2L 16106671 16106674 14 127 5.0 4.0 4.5 2.5 141 chr2L 16106533 intergenic not near genes chr2L 16106604 intergenic not near genes chr2L 16106674 intergenic not near genes chr2L_14_16105001 chr2L_16105001 RAL-320 483 chr2L 16141147 16141195 chr2L 16146374 16146422 copia 19 5225 5.0 7.5 6.2 2.6 5275 chr2L 16141147 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146422 intergenic not near genes chr2L_19_16140001 chr2L_16140001 RAL-320 484 chr2L 16153735 16153743 chr2L 16160789 16160817 297 6 7070 5.5 7.0 6.2 0.8 7082 chr2L 16153735 intergenic not near genes chr2L 16157276 intergenic not near genes chr2L 16160817 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-320 485 chr2L 9084338 9084340 chr2L 16217660 16217660 10 7133321 20.0 21.5 20.8 0.5 7133322 chr2L 9084338 intron Toll-4 + chr2L 12650999 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-320 486 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 9 145889 12.0 21.5 16.8 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RAL-320 487 chr2L 16354759 16354785 chr2L 16354871 16354897 13 111 1.5 6.5 4.0 2.6 138 chr2L 16354759 intergenic CaBP1 -,CG4455 + chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354897 3` UTR CaBP1 - chr2L_13_16350001 chr2L_16350001 RAL-320 488 chr2L 16363925 16363969 chr2L 16364191 16364235 15 265 4.0 5.0 4.5 2.7 310 chr2L 16363925 intergenic not near genes chr2L 16364080 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_15_16360001 chr2L_16360001 RAL-320 489 chr2L 16365428 16365474 chr2L 16365560 16365605 9 132 2.0 0.5 1.2 4.1 177 chr2L 16365428 intergenic jhamt + chr2L 16365516 intergenic jhamt + chr2L 16365605 intergenic jhamt + chr2L_9_16365001 chr2L_16365001 RAL-320 490 chr2L 16386436 16386438 chr2L 16386534 16386534 4 98 0.0 1.5 0.8 2.2 98 chr2L 16386436 intergenic not near genes chr2L 16386485 intergenic not near genes chr2L 16386534 intergenic not near genes chr2L_4_16385001 chr2L_16385001 RAL-320 491 chr2L 16434087 16434130 chr2L 16434189 16434232 19 100 6.0 1.5 3.8 4.0 145 chr2L 16434087 intron CG5888 - chr2L 16434160 intron CG5888 - chr2L 16434232 intron CG5888 - chr2L_19_16430001 chr2L_16430001 RAL-320 492 chr2L 16443970 16443993 chr2L 16444067 16444090 10 94 10.0 1.0 5.5 1.5 120 chr2L 16443970 intron CG5888 - chr2L 16444030 intron CG5888 - chr2L 16444090 intron CG5888 - chr2L_10_16440001 chr2L_16440001 RAL-320 493 chr2L 16443994 16444022 chr2L 16444066 16444088 9 77 6.5 1.0 3.8 1.9 94 chr2L 16443994 intron CG5888 - chr2L 16444041 intron CG5888 - chr2L 16444088 intron CG5888 - chr2L_9_16440001 chr2L_16440001 RAL-320 494 chr2L 16511940 16511974 chr2L 16519167 16519201 HMS-Beagle 6 7227 8.0 6.5 7.2 0.7 7261 chr2L 16511940 intron CG5953 - chr2L 16515570 intron CG5953 - chr2L 16519201 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-320 495 chr2L 16583075 16583128 chr2L 16583183 16583186 16 104 1.0 4.0 2.5 4.6 111 chr2L 16583075 intron CG42389 + chr2L 16583130 intron CG42389 + chr2L 16583186 intron CG42389 + chr2L_16_16580001 chr2L_16580001 RAL-320 496 chr2L 16583539 16583581 chr2L 16583693 16583726 11 147 4.5 4.5 4.5 2.0 187 chr2L 16583539 intron CG42389 + chr2L 16583632 intron CG42389 + chr2L 16583726 intron CG42389 + chr2L_11_16580001 chr2L_16580001 RAL-320 497 chr2L 16594003 16594147 chr2L 16594100 16594257 21 102 0.0 0.0 0.0 21.0 254 chr2L 16594003 intron CG42389 + chr2L 16594130 intron CG42389 + chr2L 16594257 intron CG42389 + chr2L_21_16590001 chr2L_16590001 RAL-320 498 chr2L 16633163 16633216 chr2L 16633261 16633313 13 93 1.5 2.0 1.8 4.6 150 chr2L 16633163 intron CG42389 + chr2L 16633238 intron CG42389 + chr2L 16633313 intron CG42389 + chr2L_13_16630001 chr2L_16630001 RAL-320 499 chr2L 16637821 16637847 chr2L 16637921 16637951 6 103 1.5 2.5 2.0 2.0 130 chr2L 16637821 intron CG42389 + chr2L 16637886 intron CG42389 + chr2L 16637951 intron CG42389 + chr2L_6_16635001 chr2L_16635001 RAL-320 500 chr2L 16654428 16654473 chr2L 16654565 16654610 14 133 2.5 3.0 2.8 3.7 182 chr2L 16654428 intron CG42389 + chr2L 16654519 intron CG42389 + chr2L 16654610 intron CG42389 + chr2L_14_16650001 chr2L_16650001 RAL-320 501 chr2L 16693894 16693942 chr2L 16693995 16694039 19 98 4.0 2.0 3.0 4.8 145 chr2L 16693894 intron grp + chr2L 16693966 intron grp + chr2L 16694039 intron grp + chr2L_19_16690001 chr2L_16690001 RAL-320 502 chr2L 16695238 16695289 chr2L 16695342 16695388 11 103 2.0 2.5 2.2 3.4 150 chr2L 16695238 intron grp + chr2L 16695313 intron grp + chr2L 16695388 intron grp + chr2L_11_16695001 chr2L_16695001 RAL-320 503 chr2L 16697053 16697085 chr2L 16697266 16697298 11 213 1.5 6.0 3.8 2.3 245 chr2L 16697053 intron grp + chr2L 16697176 intron grp + chr2L 16697298 intron grp + chr2L_11_16695001 chr2L_16695001 RAL-320 504 chr2L 16721427 16721472 chr2L 16721536 16721584 23 106 4.0 5.0 4.5 4.2 157 chr2L 16721427 intron Cyt-c-p + chr2L 16721506 intron Cyt-c-p + chr2L 16721584 intron Cyt-c-p + chr2L_23_16720001 chr2L_16720001 RAL-320 505 chr2L 16722569 16722598 chr2L 16722675 16722685 6 100 3.0 0.5 1.8 2.1 116 chr2L 16722569 3` UTR Cyt-c-p + chr2L 16722627 3` UTR Cyt-c-p + chr2L 16722685 intergenic Cyt-c-p +,VhaSFD - chr2L_6_16720001 chr2L_16720001 RAL-320 506 chr2L 16764949 16764998 chr2L 16765048 16765098 6 100 3.0 3.5 3.2 1.4 149 chr2L 16764949 intergenic not near genes chr2L 16765024 intergenic not near genes chr2L 16765098 intergenic not near genes chr2L_6_16765001 chr2L_16765001 RAL-320 507 chr2L 16791203 16791246 chr2L 16791309 16791352 15 105 4.5 4.5 4.5 2.7 149 chr2L 16791203 intergenic CG17928 +,Cyt-b5-r - chr2L 16791278 intergenic CG17928 + chr2L 16791352 intergenic CG17928 + chr2L_15_16790001 chr2L_16790001 RAL-320 508 chr2L 16796073 16796095 chr2L 16796184 16796216 11 117 1.0 4.5 2.8 2.9 143 chr2L 16796073 intergenic Ugt36Ba + chr2L 16796144 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796216 intergenic Ugt36Ba +,Ugt36Bb + chr2L_11_16795001 chr2L_16795001 RAL-320 509 chr2L 16867012 16867040 chr2L 16867121 16867155 12 113 3.5 5.0 4.2 2.3 143 chr2L 16867012 intergenic not near genes chr2L 16867084 intergenic not near genes chr2L 16867155 intergenic not near genes chr2L_12_16865001 chr2L_16865001 RAL-320 510 chr2L 16952664 16952715 chr2L 16952793 16952844 15 129 3.0 2.5 2.8 3.9 180 chr2L 16952664 intergenic not near genes chr2L 16952754 intergenic not near genes chr2L 16952844 intergenic not near genes chr2L_15_16950001 chr2L_16950001 RAL-320 511 chr2L 16958092 16958127 chr2L 16962900 16962935 Doc 14 4808 4.0 2.5 3.2 3.3 4843 chr2L 16958092 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962935 intergenic not near genes chr2L_14_16960001 chr2L_16960001 RAL-320 512 chr2L 16999014 16999033 chr2L 16999089 16999132 5 94 0.0 2.0 1.0 2.5 118 chr2L 16999014 intergenic CR45357 +,CR45356 + chr2L 16999073 intergenic CR45357 + chr2L 16999132 intergenic CR45357 + chr2L_5_16995001 chr2L_16995001 RAL-320 513 chr2L 17005401 17005425 chr2L 17005509 17005515 11 105 5.5 4.5 5.0 1.8 114 chr2L 17005401 intergenic not near genes chr2L 17005458 intergenic not near genes chr2L 17005515 intergenic not near genes chr2L_11_17005001 chr2L_17005001 RAL-320 514 chr2L 17032481 17032517 chr2L 17032586 17032622 11 104 6.0 1.0 3.5 2.4 141 chr2L 17032481 intergenic not near genes chr2L 17032552 intergenic not near genes chr2L 17032622 intergenic not near genes chr2L_11_17030001 chr2L_17030001 RAL-320 515 chr2L 17033903 17033950 chr2L 17034000 17034027 16 101 2.5 5.0 3.8 3.3 124 chr2L 17033903 intergenic not near genes chr2L 17033965 intergenic not near genes chr2L 17034027 intergenic not near genes chr2L_16_17030001 chr2L_17030001 RAL-320 516 chr2L 17062735 17062787 chr2L 17062837 17062889 8 102 2.5 2.0 2.2 2.5 154 chr2L 17062735 intergenic not near genes chr2L 17062812 intergenic not near genes chr2L 17062889 intergenic not near genes chr2L_8_17060001 chr2L_17060001 RAL-320 517 chr2L 17087374 17087400 chr2L 17087502 17087538 7 136 1.5 6.0 3.8 1.5 164 chr2L 17087374 intergenic CG12620 + chr2L 17087456 intergenic CG12620 + chr2L 17087538 intergenic CG12620 + chr2L_7_17085001 chr2L_17085001 RAL-320 518 chr2L 17111818 17111860 chr2L 17111936 17111978 14 117 3.5 3.5 3.5 3.1 160 chr2L 17111818 intergenic not near genes chr2L 17111898 intergenic not near genes chr2L 17111978 intergenic not near genes chr2L_14_17110001 chr2L_17110001 RAL-320 519 chr2L 17120829 17120875 chr2L 17120927 17120974 15 97 3.5 4.5 4.0 3.0 145 chr2L 17120829 intergenic not near genes chr2L 17120902 intergenic not near genes chr2L 17120974 intergenic not near genes chr2L_15_17120001 chr2L_17120001 RAL-320 520 chr2L 17158718 17158753 chr2L 17158826 17158874 10 116 0.5 3.0 1.8 3.6 156 chr2L 17158718 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158796 intron,intron CG34106 +,beat-IIIa + chr2L 17158874 intron,intron CG34106 +,beat-IIIa + chr2L_10_17155001 chr2L_17155001 RAL-320 521 chr2L 17167547 17167595 chr2L 17167808 17167856 pogo 6 258 5.0 4.0 4.5 1.1 309 chr2L 17167547 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167856 intron,intron CG34106 +,beat-IIIa + chr2L_6_17165001 chr2L_17165001 RAL-320 522 chr2L 17178390 17178399 chr2L 17178511 17178520 4 121 3.0 0.0 1.5 1.6 130 chr2L 17178390 intergenic Gr36b +,Gr36a + chr2L 17178455 intergenic Gr36b + chr2L 17178520 intergenic Gr36b + chr2L_4_17175001 chr2L_17175001 RAL-320 523 chr2L 17199142 17199182 chr2L 17200629 17200669 hobo 6 1487 8.0 4.5 6.2 0.8 1527 chr2L 17199142 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200669 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-320 524 chr2L 17204028 17204071 chr2L 17204124 17204152 16 92 5.5 7.5 6.5 2.1 124 chr2L 17204028 intron beat-IIIc - chr2L 17204090 intron beat-IIIc - chr2L 17204152 intron beat-IIIc - chr2L_16_17200001 chr2L_17200001 RAL-320 525 chr2L 17232620 17232636 chr2L 17232814 17232837 4 206 9.5 0.0 4.8 0.7 217 chr2L 17232620 intron beat-IIIc - chr2L 17232728 intron beat-IIIc - chr2L 17232837 intron beat-IIIc - chr2L_4_17230001 chr2L_17230001 RAL-320 526 chr2L 17273180 17273221 chr2L 17277977 17277994 F-element 11 4791 3.0 5.0 4.0 2.2 4814 chr2L 17273180 intergenic not near genes chr2L 17275587 intergenic not near genes chr2L 17277994 intergenic not near genes chr2L_11_17275001 chr2L_17275001 RAL-320 527 chr2L 17310359 17310404 chr2L 17310473 17310518 12 112 0.0 5.0 2.5 3.4 159 chr2L 17310359 intergenic not near genes chr2L 17310438 intergenic not near genes chr2L 17310518 intergenic not near genes chr2L_12_17310001 chr2L_17310001 RAL-320 528 chr2L 17335517 17335532 chr2L 17336711 17336726 1360 4 1193 2.0 1.5 1.8 1.4 1209 chr2L 17335517 intergenic not near genes chr2L 17336122 intergenic not near genes chr2L 17336726 intergenic not near genes chr2L_4_17335001 chr2L_17335001 RAL-320 529 chr2L 17362688 17362717 chr2L 17362784 17362813 11 93 5.5 1.5 3.5 2.4 125 chr2L 17362688 intergenic not near genes chr2L 17362750 intergenic not near genes chr2L 17362813 intergenic not near genes chr2L_11_17360001 chr2L_17360001 RAL-320 530 chr2L 17375783 17375816 chr2L 17375917 17375951 9 129 9.0 8.0 8.5 0.9 168 chr2L 17375783 intron Lrch - chr2L 17375867 intron Lrch - chr2L 17375951 intron Lrch - chr2L_9_17375001 chr2L_17375001 RAL-320 531 chr2L 17379694 17379702 chr2L 17379798 17379806 4 102 3.5 4.0 3.8 0.8 112 chr2L 17379694 intron Lrch - chr2L 17379750 intron Lrch - chr2L 17379806 intron Lrch - chr2L_4_17375001 chr2L_17375001 RAL-320 532 chr2L 17432008 17432040 chr2L 17432135 17432156 1360 5 124 0.0 6.5 3.2 1.2 148 chr2L 17432008 intron Dif - chr2L 17432082 intron Dif - chr2L 17432156 intron Dif - chr2L_5_17430001 chr2L_17430001 RAL-320 533 chr2L 17616478 17616499 chr2L 17616584 17616605 6 105 6.5 3.5 5.0 1.0 127 chr2L 17616478 intergenic not near genes chr2L 17616542 intergenic not near genes chr2L 17616605 intergenic not near genes chr2L_6_17615001 chr2L_17615001 RAL-320 534 chr2L 17687498 17687509 chr2L 17692263 17692274 F-element 6 4765 6.5 7.0 6.8 0.8 4776 chr2L 17687498 intron CadN - chr2L 17689886 intron CadN - chr2L 17692274 intron CadN - chr2L_6_17685001 chr2L_17685001 RAL-320 535 chr2L 17708751 17708789 chr2L 17708856 17708901 12 108 2.5 3.5 3.0 3.0 150 chr2L 17708751 intron CadN - chr2L 17708826 intron CadN - chr2L 17708901 intron CadN - chr2L_12_17705001 chr2L_17705001 RAL-320 536 chr2L 17723768 17723800 chr2L 17723881 17723913 12 112 1.5 3.5 2.5 3.4 145 chr2L 17723768 intron CadN - chr2L 17723840 intron CadN - chr2L 17723913 intron CadN - chr2L_12_17720001 chr2L_17720001 RAL-320 537 chr2L 17734990 17735008 chr2L 17735100 17735118 11 108 8.0 7.5 7.8 1.2 128 chr2L 17734990 intron CadN - chr2L 17735054 intron CadN - chr2L 17735118 intron CadN - chr2L_11_17735001 chr2L_17735001 RAL-320 538 chr2L 17735013 17735027 chr2L 17735093 17735137 8 106 4.5 7.0 5.8 1.2 124 chr2L 17735013 intron CadN - chr2L 17735075 intron CadN - chr2L 17735137 intron CadN - chr2L_8_17735001 chr2L_17735001 RAL-320 539 chr2L 17759337 17759359 chr2L 17759451 17759472 6 114 5.0 9.0 7.0 0.8 135 chr2L 17759337 intron CadN - chr2L 17759404 intron CadN - chr2L 17759472 intron CadN - chr2L_6_17755001 chr2L_17755001 RAL-320 540 chr2L 17769442 17769464 chr2L 17769530 17769567 4 94 1.5 1.5 1.5 1.6 125 chr2L 17769442 intron CadN - chr2L 17769504 intron CadN - chr2L 17769567 intron CadN - chr2L_4_17765001 chr2L_17765001 RAL-320 541 chr2L 17790194 17790242 chr2L 17790297 17790345 17 103 3.0 3.5 3.2 4.0 151 chr2L 17790194 intron CadN2 - chr2L 17790270 intron CadN2 - chr2L 17790345 intron CadN2 - chr2L_17_17790001 chr2L_17790001 RAL-320 542 chr2L 17819907 17819937 chr2L 17825130 17825152 copia 10 5218 8.0 3.0 5.5 1.5 5245 chr2L 17819907 intron CadN2 - chr2L 17822530 intron CadN2 - chr2L 17825152 intron CadN2 - chr2L_10_17820001 chr2L_17820001 RAL-320 543 chr2L 17819939 17819950 chr2L 17825126 17825173 copia 6 5217 4.0 2.5 3.2 1.4 5234 chr2L 17819939 intron CadN2 - chr2L 17822556 intron CadN2 - chr2L 17825173 intron CadN2 - chr2L_6_17820001 chr2L_17820001 RAL-320 544 chr2L 17859609 17859645 chr2L 17859700 17859751 13 91 4.0 4.5 4.2 2.5 142 chr2L 17859609 intron CadN2 - chr2L 17859680 intron CadN2 - chr2L 17859751 intron CadN2 - chr2L_13_17855001 chr2L_17855001 RAL-320 545 chr2L 17906751 17906780 chr2L 17906838 17906877 12 94 4.5 5.5 5.0 2.0 126 chr2L 17906751 intergenic not near genes chr2L 17906814 intergenic not near genes chr2L 17906877 intergenic not near genes chr2L_12_17905001 chr2L_17905001 RAL-320 546 chr2L 17911956 17911988 chr2L 17914142 17914178 pogo 8 2190 3.5 8.5 6.0 1.1 2222 chr2L 17911956 intergenic not near genes chr2L 17913067 intergenic not near genes chr2L 17914178 intergenic CG43271 - chr2L_8_17910001 chr2L_17910001 RAL-320 547 chr2L 17938667 17938691 chr2L 17938773 17938797 5 106 9.5 2.5 6.0 0.7 130 chr2L 17938667 intergenic CR44399 - chr2L 17938732 intergenic CR44399 - chr2L 17938797 intergenic CR44399 - chr2L_5_17935001 chr2L_17935001 RAL-320 548 chr2L 17941832 17941875 chr2L 17941936 17941979 5 101 5.0 6.0 5.5 0.8 147 chr2L 17941832 intergenic not near genes chr2L 17941906 intergenic not near genes chr2L 17941979 intergenic not near genes chr2L_5_17940001 chr2L_17940001 RAL-320 549 chr2L 17951924 17951973 chr2L 17953410 17953458 hobo 19 1484 2.5 5.5 4.0 3.8 1534 chr2L 17951924 intergenic CR44398 -,CR44397 - chr2L 17952691 intergenic not near genes chr2L 17953458 intergenic not near genes chr2L_19_17950001 chr2L_17950001 RAL-320 550 chr2L 17990209 17990247 chr2L 17990314 17990352 5 100 5.0 7.5 6.2 0.7 143 chr2L 17990209 intergenic Prosbeta5R2 + chr2L 17990280 intergenic Prosbeta5R2 + chr2L 17990352 intergenic Prosbeta5R2 + chr2L_5_17990001 chr2L_17990001 RAL-320 551 chr2L 18051864 18051905 chr2L 18061031 18061067 roo 6 9166 4.5 6.5 5.5 0.9 9203 chr2L 18051864 intron rdo + chr2L 18056466 intron rdo + chr2L 18061067 intron rdo + chr2L_6_18055001 chr2L_18055001 RAL-320 552 chr2L 18066965 18066987 chr2L 18067032 18067033 9 73 3.0 2.0 2.5 2.6 68 chr2L 18066965 intron rdo + chr2L 18066999 intron rdo + chr2L 18067033 intron rdo + chr2L_9_18065001 chr2L_18065001 RAL-320 553 chr2L 18109955 18110106 chr2L 18110056 18110226 27 102 0.5 0.5 0.5 18.0 271 chr2L 18109955 intergenic not near genes chr2L 18110090 intergenic not near genes chr2L 18110226 intergenic not near genes chr2L_27_18110001 chr2L_18110001 RAL-320 554 chr2L 18171199 18171204 chr2L 18171392 18171397 5 194 41.5 22.0 31.8 0.2 198 chr2L 18171199 intron CG42750 - chr2L 18171298 intron CG42750 - chr2L 18171397 intron CG42750 - chr2L_5_18170001 chr2L_18170001 RAL-320 555 chr2L 18171207 18171242 chr2L 18171388 18171436 10 192 32.5 22.0 27.2 0.4 229 chr2L 18171207 intron CG42750 - chr2L 18171322 intron CG42750 - chr2L 18171436 intron CG42750 - chr2L_10_18170001 chr2L_18170001 RAL-320 556 chr2L 18170754 18170785 chr2L 18171939 18171956 9 1180 28.0 16.0 22.0 0.4 1202 chr2L 18170754 intron CG42750 - chr2L 18171355 intron CG42750 - chr2L 18171956 intron CG42750 - chr2L_9_18170001 chr2L_18170001 RAL-320 557 chr2L 18173080 18173119 chr2L 18173327 18173365 12 247 3.5 3.0 3.2 2.9 285 chr2L 18173080 intron CG42750 - chr2L 18173222 intron CG42750 - chr2L 18173365 intron CG42750 - chr2L_12_18170001 chr2L_18170001 RAL-320 558 chr2L 18199016 18199059 chr2L 18199117 18199160 8 99 5.5 7.0 6.2 1.1 144 chr2L 18199016 intron CG42750 - chr2L 18199088 intron CG42750 - chr2L 18199160 intron CG42750 - chr2L_8_18195001 chr2L_18195001 RAL-320 559 chr2L 18208243 18208276 chr2L 18208345 18208378 9 99 4.5 7.0 5.8 1.3 135 chr2L 18208243 intron CG42750 - chr2L 18208310 intron CG42750 - chr2L 18208378 intron CG42750 - chr2L_9_18205001 chr2L_18205001 RAL-320 560 chr2L 18210272 18210316 chr2L 18210396 18210440 13 124 5.5 3.0 4.2 2.5 168 chr2L 18210272 intron CG42750 - chr2L 18210356 intron CG42750 - chr2L 18210440 intron CG42750 - chr2L_13_18210001 chr2L_18210001 RAL-320 561 chr2L 18227530 18227571 chr2L 18227844 18227892 4 317 6.5 3.0 4.8 0.7 362 chr2L 18227530 intron CG42750 - chr2L 18227711 intron CG42750 - chr2L 18227892 intron CG42750 - chr2L_4_18225001 chr2L_18225001 RAL-320 562 chr2L 18254799 18254841 chr2L 18254917 18254961 16 119 5.5 4.0 4.8 2.8 162 chr2L 18254799 intron CG42750 - chr2L 18254880 intron CG42750 - chr2L 18254961 intron CG42750 - chr2L_16_18250001 chr2L_18250001 RAL-320 563 chr2L 18297702 18297744 chr2L 18297808 18297845 9 98 2.5 8.0 5.2 1.5 143 chr2L 18297702 intergenic CG5790 + chr2L 18297774 intergenic CG5790 + chr2L 18297845 intergenic CG5790 + chr2L_9_18295001 chr2L_18295001 RAL-320 564 chr2L 18345763 18345797 chr2L 18345854 18345885 6 87 5.5 6.5 6.0 0.9 122 chr2L 18345763 intron Fas3 + chr2L 18345824 intron Fas3 + chr2L 18345885 intron Fas3 + chr2L_6_18345001 chr2L_18345001 RAL-320 565 chr2L 18365792 18365844 chr2L 18365912 18365954 12 113 4.5 2.5 3.5 2.7 162 chr2L 18365792 intron Fas3 + chr2L 18365873 intron Fas3 + chr2L 18365954 intron Fas3 + chr2L_12_18365001 chr2L_18365001 RAL-320 566 chr2L 18408010 18408048 chr2L 18412814 18412833 Doc 11 4802 6.5 0.0 3.2 2.6 4823 chr2L 18408010 intergenic not near genes chr2L 18410422 intergenic not near genes chr2L 18412833 intergenic not near genes chr2L_11_18410001 chr2L_18410001 RAL-320 567 chr2L 18414892 18414944 chr2L 18414994 18415041 13 98 2.5 4.0 3.2 3.1 149 chr2L 18414892 intergenic not near genes chr2L 18414966 intergenic not near genes chr2L 18415041 intergenic not near genes chr2L_13_18410001 chr2L_18410001 RAL-320 568 chr2L 18538546 18538597 chr2L 18538648 18538698 10 97 0.5 7.5 4.0 2.0 152 chr2L 18538546 intron Pde11 - chr2L 18538622 intron Pde11 - chr2L 18538698 intron Pde11 - chr2L_10_18535001 chr2L_18535001 RAL-320 569 chr2L 18561535 18561579 chr2L 18561656 18561700 13 119 3.5 3.0 3.2 3.1 165 chr2L 18561535 intron Pde11 - chr2L 18561618 intron Pde11 - chr2L 18561700 intron Pde11 - chr2L_13_18560001 chr2L_18560001 RAL-320 570 chr2L 18737064 18737087 chr2L 18737205 18737217 9 140 4.0 5.5 4.8 1.6 153 chr2L 18737064 intergenic not near genes chr2L 18737140 intergenic not near genes chr2L 18737217 intergenic not near genes chr2L_9_18735001 chr2L_18735001 RAL-320 571 chr2L 18811398 18811402 chr2L 18811500 18811504 5 102 9.5 0.0 4.8 0.9 106 chr2L 18811398 intergenic CG10570 -,CG42502 - chr2L 18811451 intergenic CG10570 -,CG42502 - chr2L 18811504 intergenic not near genes chr2L_5_18810001 chr2L_18810001 RAL-320 572 chr2L 18811405 18811437 chr2L 18811489 18811539 7 99 5.0 0.0 2.5 2.0 134 chr2L 18811405 intergenic CG10570 -,CG42502 - chr2L 18811472 intergenic CG10570 -,CG42502 - chr2L 18811539 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-320 573 chr2L 18883849 18883879 chr2L 18883935 18883981 12 93 6.0 7.0 6.5 1.6 132 chr2L 18883849 intergenic not near genes chr2L 18883915 intergenic not near genes chr2L 18883981 intergenic not near genes chr2L_12_18880001 chr2L_18880001 RAL-320 574 chr2L 18898380 18898423 chr2L 18898482 18898525 19 99 3.5 0.5 2.0 6.3 145 chr2L 18898380 intergenic not near genes chr2L 18898452 intergenic not near genes chr2L 18898525 intergenic not near genes chr2L_19_18895001 chr2L_18895001 RAL-320 575 chr2L 18902607 18902656 chr2L 18902908 18902957 16 298 3.5 2.0 2.8 4.2 350 chr2L 18902607 intergenic not near genes chr2L 18902782 intergenic not near genes chr2L 18902957 intergenic not near genes chr2L_16_18900001 chr2L_18900001 RAL-320 576 chr2L 18925209 18925230 chr2L 18925324 18925345 7 114 10.0 4.5 7.2 0.9 136 chr2L 18925209 intron ssp3 - chr2L 18925277 intron ssp3 - chr2L 18925345 intron ssp3 - chr2L_7_18925001 chr2L_18925001 RAL-320 577 chr2L 18925232 18925253 chr2L 18925321 18925343 8 106 5.0 4.0 4.5 1.5 111 chr2L 18925232 intron ssp3 - chr2L 18925288 intron ssp3 - chr2L 18925343 intron ssp3 - chr2L_8_18925001 chr2L_18925001 RAL-320 578 chr2L 19147350 19147403 chr2L 19154405 19154410 297 12 7045 2.0 6.0 4.0 2.4 7060 chr2L 19147350 intron brat + chr2L 19150880 intron brat + chr2L 19154410 intron brat + chr2L_12_19150001 chr2L_19150001 RAL-320 579 chr2L 19164763 19164775 chr2L 19164849 19164866 7 94 0.0 4.0 2.0 2.3 103 chr2L 19164763 intron brat + chr2L 19164814 intron brat + chr2L 19164866 intron brat + chr2L_7_19160001 chr2L_19160001 RAL-320 580 chr2L 19189951 19189979 chr2L 19190122 19190153 6 163 9.0 3.5 6.2 0.8 202 chr2L 19189951 intergenic pigeon +,drl + chr2L 19190052 intergenic pigeon +,drl + chr2L 19190153 intergenic drl +,pigeon + chr2L_6_19190001 chr2L_19190001 RAL-320 581 chr2L 19199664 19199701 chr2L 19199744 19199762 11 80 2.5 4.0 3.2 2.6 98 chr2L 19199664 intron drl + chr2L 19199713 intron drl + chr2L 19199762 intron drl + chr2L_11_19195001 chr2L_19195001 RAL-320 582 chr2L 19209596 19209648 chr2L 19209701 19209753 6 104 3.0 3.0 3.0 1.5 157 chr2L 19209596 intergenic not near genes chr2L 19209674 intergenic not near genes chr2L 19209753 intergenic not near genes chr2L_6_19205001 chr2L_19205001 RAL-320 583 chr2L 19345010 19345014 chr2L 19357229 19357243 blood 4 12224 4.5 4.5 4.5 0.7 12233 chr2L 19345010 intron dnt - chr2L 19351126 intron dnt - chr2L 19357243 intron dnt - chr2L_4_19350001 chr2L_19350001 RAL-320 584 chr2L 19357529 19357569 chr2L 19357639 19357679 16 108 3.0 5.5 4.2 3.1 150 chr2L 19357529 intron dnt - chr2L 19357604 intron dnt - chr2L 19357679 intron dnt - chr2L_16_19355001 chr2L_19355001 RAL-320 585 chr2L 19374919 19374959 chr2L 19375059 19375098 14 138 4.5 6.0 5.2 2.3 179 chr2L 19374919 intergenic not near genes chr2L 19375008 intergenic not near genes chr2L 19375098 intergenic not near genes chr2L_14_19375001 chr2L_19375001 RAL-320 586 chr2L 19437502 19437531 chr2L 19437614 19437632 9 111 4.0 4.0 4.0 1.8 130 chr2L 19437502 intron CG10237 - chr2L 19437567 intron CG10237 - chr2L 19437632 intron CG10237 - chr2L_9_19435001 chr2L_19435001 RAL-320 587 chr2L 19469164 19469199 chr2L 19469264 19469304 14 101 4.0 4.5 4.2 2.7 140 chr2L 19469164 5` UTR CR45722 + chr2L 19469234 5` UTR CR45722 + chr2L 19469304 5` UTR CR45722 + chr2L_14_19465001 chr2L_19465001 RAL-320 588 chr2L 19544600 19544623 chr2L 19544664 19544679 7 75 6.0 7.5 6.8 0.9 79 chr2L 19544600 exon ref(2)P + chr2L 19544640 exon ref(2)P + chr2L 19544679 exon ref(2)P + chr2L_7_19540001 chr2L_19540001 RAL-320 589 chr2L 19562509 19562555 chr2L 19562610 19562640 6 95 0.0 4.5 2.2 1.9 131 chr2L 19562509 exon Tep5 + chr2L 19562574 intron Tep5 + chr2L 19562640 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-320 590 chr2L 19608588 19608612 chr2L 19608699 19608722 7 107 2.5 3.5 3.0 1.8 134 chr2L 19608588 intron Lar + chr2L 19608655 intron Lar + chr2L 19608722 intron Lar + chr2L_7_19605001 chr2L_19605001 RAL-320 591 chr2L 19620085 19620129 chr2L 19621084 19621104 jockey 16 999 5.0 3.5 4.2 3.1 1019 chr2L 19620085 intron Lar + chr2L 19620594 intron Lar + chr2L 19621104 intron Lar + chr2L_16_19620001 chr2L_19620001 RAL-320 592 chr2L 19652562 19652598 chr2L 19674016 19674040 opus 11 21453 6.5 9.0 7.8 1.2 21478 chr2L 19652562 intron Lar + chr2L 19663301 intron Lar + chr2L 19674040 intron Lar + chr2L_11_19660001 chr2L_19660001 RAL-320 593 chr2L 19689041 19689092 chr2L 19689165 19689205 8 121 3.5 1.5 2.5 2.3 164 chr2L 19689041 intron Lar + chr2L 19689123 intron Lar + chr2L 19689205 intron Lar + chr2L_8_19685001 chr2L_19685001 RAL-320 594 chr2L 19693787 19693835 chr2L 19693899 19693917 9 95 4.0 5.0 4.5 1.6 130 chr2L 19693787 intron Lar + chr2L 19693852 intron Lar + chr2L 19693917 intron Lar + chr2L_9_19690001 chr2L_19690001 RAL-320 595 chr2L 19697115 19697164 chr2L 19697228 19697275 18 109 6.0 7.0 6.5 2.4 160 chr2L 19697115 intron Lar + chr2L 19697195 intron Lar + chr2L 19697275 intron Lar + chr2L_18_19695001 chr2L_19695001 RAL-320 596 chr2L 19703524 19703565 chr2L 19712680 19712716 roo 12 9151 6.5 2.5 4.5 2.2 9192 chr2L 19703524 intron Lar + chr2L 19708120 intron Lar + chr2L 19712716 intron Lar + chr2L_12_19705001 chr2L_19705001 RAL-320 597 chr2L 19712675 19712698 chr2L 19712779 19712782 4 93 4.0 9.0 6.5 0.5 107 chr2L 19712675 intron Lar + chr2L 19712728 intron Lar + chr2L 19712782 intron Lar + chr2L_4_19710001 chr2L_19710001 RAL-320 598 chr2L 19712704 19712719 chr2L 19712770 19712811 11 86 3.5 6.5 5.0 1.8 107 chr2L 19712704 intron Lar + chr2L 19712758 intron Lar + chr2L 19712811 intron Lar + chr2L_11_19710001 chr2L_19710001 RAL-320 599 chr2L 19737366 19737385 chr2L 19740820 19740853 1360 7 3468 3.5 3.5 3.5 1.6 3487 chr2L 19737366 intergenic Nf-YB + chr2L 19739110 intergenic not near genes chr2L 19740853 intergenic not near genes chr2L_7_19735001 chr2L_19735001 RAL-320 600 chr2L 19762792 19762834 chr2L 19763052 19763096 pogo 9 262 6.5 3.0 4.8 1.6 304 chr2L 19762792 5` UTR fbp - chr2L 19762944 intron fbp - chr2L 19763096 intron fbp - chr2L_9_19760001 chr2L_19760001 RAL-320 601 chr2L 19823245 19823297 chr2L 19823346 19823381 14 104 5.0 0.0 2.5 4.0 136 chr2L 19823245 intron sick + chr2L 19823313 intron sick + chr2L 19823381 intron sick + chr2L_14_19820001 chr2L_19820001 RAL-320 602 chr2L 19824393 19824428 chr2L 19824496 19824531 12 102 2.0 3.0 2.5 3.4 138 chr2L 19824393 intron sick + chr2L 19824462 intron sick + chr2L 19824531 intron sick + chr2L_12_19820001 chr2L_19820001 RAL-320 603 chr2L 19837260 19837309 chr2L 19837360 19837393 25 96 4.0 5.0 4.5 4.5 133 chr2L 19837260 intron sick + chr2L 19837326 intron sick + chr2L 19837393 intron sick + chr2L_25_19835001 chr2L_19835001 RAL-320 604 chr2L 19882662 19882698 chr2L 19882822 19882858 16 166 7.0 3.5 5.2 2.6 196 chr2L 19882662 intron sick + chr2L 19882760 intron sick + chr2L 19882858 intron sick + chr2L_16_19880001 chr2L_19880001 RAL-320 605 chr2L 19887775 19887786 chr2L 19887901 19887912 4 126 3.0 3.5 3.2 1.0 137 chr2L 19887775 intron sick + chr2L 19887844 intron sick + chr2L 19887912 intron sick + chr2L_4_19885001 chr2L_19885001 RAL-320 606 chr2L 19888302 19888326 chr2L 19888383 19888413 4 91 3.5 3.5 3.5 0.9 111 chr2L 19888302 intron sick + chr2L 19888358 intron sick + chr2L 19888413 intron sick + chr2L_4_19885001 chr2L_19885001 RAL-320 607 chr2L 19935246 19935258 chr2L 19935322 19935355 4 88 3.5 6.0 4.8 0.7 109 chr2L 19935246 intron sick + chr2L 19935300 intron sick + chr2L 19935355 intron sick + chr2L_4_19935001 chr2L_19935001 RAL-320 608 chr2L 20005853 20005898 chr2L 20010949 20010968 flea 19 5091 7.0 9.0 8.0 2.1 5115 chr2L 20005853 intron CG43861 - chr2L 20008410 intron CG43861 - chr2L 20010968 intron CG43861 - chr2L_19_20005001 chr2L_20005001 RAL-320 609 chr2L 20011728 20011762 chr2L 20011831 20011865 8 101 0.0 6.0 3.0 2.0 137 chr2L 20011728 intron CG43861 - chr2L 20011796 intron CG43861 - chr2L 20011865 intron CG43861 - chr2L_8_20010001 chr2L_20010001 RAL-320 610 chr2L 20022083 20022124 chr2L 20022211 20022234 7 129 4.0 3.5 3.8 1.5 151 chr2L 20022083 intergenic not near genes chr2L 20022158 intergenic not near genes chr2L 20022234 intergenic not near genes chr2L_7_20020001 chr2L_20020001 RAL-320 611 chr2L 20057031 20057064 chr2L 20057128 20057161 4 94 8.5 4.0 6.2 0.6 130 chr2L 20057031 intergenic not near genes chr2L 20057096 intergenic not near genes chr2L 20057161 intergenic not near genes chr2L_4_20055001 chr2L_20055001 RAL-320 612 chr2L 20122617 20122650 chr2L 20122727 20122761 10 110 3.0 2.0 2.5 2.9 144 chr2L 20122617 intergenic not near genes chr2L 20122689 intergenic not near genes chr2L 20122761 intergenic not near genes chr2L_10_20120001 chr2L_20120001 RAL-320 613 chr2L 20139523 20139572 chr2L 20139740 20139790 17 209 3.5 6.0 4.8 2.9 267 chr2L 20139523 intergenic not near genes chr2L 20139656 intergenic not near genes chr2L 20139790 intergenic not near genes chr2L_17_20135001 chr2L_20135001 RAL-320 614 chr2L 20272093 20272143 chr2L 20282824 20282874 copia 16 10727 6.5 6.0 6.2 2.2 10781 chr2L 20272093 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282874 intergenic not near genes chr2L_16_20275001 chr2L_20275001 RAL-320 615 chr2L 20296494 20296536 chr2L 20296595 20296637 9 93 0.5 4.5 2.5 2.6 143 chr2L 20296494 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296637 intergenic CR43414 - chr2L_9_20295001 chr2L_20295001 RAL-320 616 chr2L 20302983 20303009 chr2L 20303088 20303098 8 106 2.5 0.0 1.2 3.6 115 chr2L 20302983 intergenic not near genes chr2L 20303040 intergenic not near genes chr2L 20303098 intergenic not near genes chr2L_8_20300001 chr2L_20300001 RAL-320 617 chr2L 20303160 20303187 chr2L 20310638 20310675 blood 10 7485 1.0 4.0 2.5 2.9 7515 chr2L 20303160 intergenic not near genes chr2L 20306918 intergenic not near genes chr2L 20310675 intergenic not near genes chr2L_10_20305001 chr2L_20305001 RAL-320 618 chr2L 20312515 20312566 chr2L 20312620 20312671 9 105 1.5 0.0 0.8 5.0 156 chr2L 20312515 intron spir + chr2L 20312593 intron spir + chr2L 20312671 intron spir + chr2L_9_20310001 chr2L_20310001 RAL-320 619 chr2L 20372207 20372246 chr2L 20372468 20372507 pogo 24 261 1.0 4.5 2.8 6.3 300 chr2L 20372207 intergenic Ugt37a1 - chr2L 20372357 intergenic Ugt37a1 - chr2L 20372507 exon Ugt37a1 - chr2L_24_20370001 chr2L_20370001 RAL-320 620 chr2L 20383421 20383472 chr2L 20383532 20383583 18 107 6.0 3.5 4.8 3.1 162 chr2L 20383421 intergenic not near genes chr2L 20383502 intergenic not near genes chr2L 20383583 intergenic not near genes chr2L_18_20380001 chr2L_20380001 RAL-320 621 chr2L 20492743 20492777 chr2L 20493113 20493137 6 366 3.5 12.5 8.0 0.7 394 chr2L 20492743 intergenic not near genes chr2L 20492940 intergenic not near genes chr2L 20493137 intergenic not near genes chr2L_6_20490001 chr2L_20490001 RAL-320 622 chr2L 20498671 20498703 chr2L 20498790 20498822 11 117 6.0 10.0 8.0 1.2 151 chr2L 20498671 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498822 intergenic not near genes chr2L_11_20495001 chr2L_20495001 RAL-320 623 chr2L 20568645 20568677 chr2L 20569055 20569066 X-element 12 408 4.0 5.5 4.8 2.1 421 chr2L 20568645 intron CR45347 + chr2L 20568856 intron CR45347 + chr2L 20569066 intron CR45347 + chr2L_12_20565001 chr2L_20565001 RAL-320 624 chr2L 20571569 20571601 chr2L 20571666 20571698 12 95 4.5 6.5 5.5 1.8 129 chr2L 20571569 intron CR45347 + chr2L 20571634 intron CR45347 + chr2L 20571698 intron CR45347 + chr2L_12_20570001 chr2L_20570001 RAL-320 625 chr2L 20576212 20576241 chr2L 20583690 20583728 blood 10 7482 7.5 2.0 4.8 1.7 7516 chr2L 20576212 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583728 3` UTR CR44909 - chr2L_10_20575001 chr2L_20575001 RAL-320 626 chr2L 20626104 20626130 chr2L 20626211 20626256 17 119 0.5 3.5 2.0 5.7 152 chr2L 20626104 3` UTR CR44909 - chr2L 20626180 3` UTR CR44909 - chr2L 20626256 intergenic CR44909 - chr2L_17_20625001 chr2L_20625001 RAL-320 627 chr2L 20630434 20630469 chr2L 20631425 20631471 9 997 2.0 4.0 3.0 2.2 1037 chr2L 20630434 intergenic not near genes chr2L 20630952 intergenic not near genes chr2L 20631471 intergenic not near genes chr2L_9_20630001 chr2L_20630001 RAL-320 628 chr2L 20674810 20674855 chr2L 20674915 20674953 11 99 3.0 0.0 1.5 4.4 143 chr2L 20674810 intron CG31678 - chr2L 20674882 intron CG31678 - chr2L 20674953 intron CG31678 - chr2L_11_20670001 chr2L_20670001 RAL-320 629 chr2L 20818170 20818202 chr2L 20818587 20818640 6 422 3.5 5.0 4.2 1.2 470 chr2L 20818170 exon CheB38a - chr2L 20818405 exon CheB38a - chr2L 20818640 intergenic CheB38a - chr2L_6_20815001 chr2L_20815001 RAL-320 630 chr2L 20819120 20819145 chr2L 20819197 20819249 13 94 3.0 3.5 3.2 3.1 129 chr2L 20819120 intergenic not near genes chr2L 20819184 intergenic not near genes chr2L 20819249 intergenic not near genes chr2L_13_20815001 chr2L_20815001 RAL-320 631 chr2L 20821485 20821520 chr2L 20821651 20821688 8 166 4.5 1.5 3.0 2.0 203 chr2L 20821485 intergenic not near genes chr2L 20821586 intergenic not near genes chr2L 20821688 intergenic not near genes chr2L_8_20820001 chr2L_20820001 RAL-320 632 chr2L 20835789 20835836 chr2L 20836526 20836573 Quasimodo 21 736 4.0 3.5 3.8 4.4 784 chr2L 20835789 5` UTR Oseg5 - chr2L 20836181 intergenic Oseg5 -,Spn38F - chr2L 20836573 intergenic Spn38F - chr2L_21_20835001 chr2L_20835001 RAL-320 633 chr2L 20891514 20891543 chr2L 20896635 20896663 jockey 7 5119 2.5 4.0 3.2 1.7 5149 chr2L 20891514 intron,intron CG43739 -,sky - chr2L 20894088 intron,intron CG43739 -,sky - chr2L 20896663 intron,intron CG43739 -,sky - chr2L_7_20890001 chr2L_20890001 RAL-320 634 chr2L 20901475 20901489 chr2L 20902618 20902636 1360 9 1158 2.5 4.5 3.5 2.0 1161 chr2L 20901475 intron,intron CG43739 -,sky - chr2L 20902056 intron,intron CG43739 -,sky - chr2L 20902636 intron,intron CG43739 -,sky - chr2L_9_20900001 chr2L_20900001 RAL-320 635 chr2L 20927144 20927162 chr2L 20927240 20927276 5 109 9.5 5.5 7.5 0.6 132 chr2L 20927144 intron CG9272 - chr2L 20927210 exon CG9272 - chr2L 20927276 exon CG9272 - chr2L_5_20925001 chr2L_20925001 RAL-320 636 chr2L 20927165 20927176 chr2L 20927233 20927257 7 89 5.0 5.0 5.0 1.2 92 chr2L 20927165 exon CG9272 - chr2L 20927211 exon CG9272 - chr2L 20927257 exon CG9272 - chr2L_7_20925001 chr2L_20925001 RAL-320 637 chr2L 20934581 20934634 chr2L 20934796 20934844 17 213 3.5 3.5 3.5 3.8 263 chr2L 20934581 intergenic CG9270 - chr2L 20934712 intergenic not near genes chr2L 20934844 intergenic not near genes chr2L_17_20930001 chr2L_20930001 RAL-320 638 chr2L 20946924 20946955 chr2L 20947031 20947056 16 104 9.0 2.5 5.8 2.4 132 chr2L 20946924 intergenic CR44606 - chr2L 20946990 intergenic CR44606 - chr2L 20947056 intergenic CR44606 - chr2L_16_20945001 chr2L_20945001 RAL-320 639 chr2L 20967066 20967105 chr2L 20967169 20967211 14 102 4.5 7.0 5.8 2.1 145 chr2L 20967066 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967211 3` UTR CG42238 - chr2L_14_20965001 chr2L_20965001 RAL-320 640 chr2L 20976637 20976674 chr2L 20981472 20981496 X-element 13 4832 5.5 8.5 7.0 1.6 4859 chr2L 20976637 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981496 intron CG42238 - chr2L_13_20975001 chr2L_20975001 RAL-320 641 chr2L 20984727 20984772 chr2L 20984828 20984836 25 104 3.0 4.0 3.5 5.6 109 chr2L 20984727 intron CG42238 - chr2L 20984782 intron CG42238 - chr2L 20984836 intron CG42238 - chr2L_25_20980001 chr2L_20980001 RAL-320 642 chr2L 20991034 20991069 chr2L 20991117 20991167 20 93 5.5 3.5 4.5 3.6 133 chr2L 20991034 intron CG42238 - chr2L 20991100 intron CG42238 - chr2L 20991167 intron CG42238 - chr2L_20_20990001 chr2L_20990001 RAL-320 643 chr2L 21020276 21020303 chr2L 21023948 21023985 NOF 12 3681 7.5 5.0 6.2 1.7 3709 chr2L 21020276 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21023985 intron CG42238 - chr2L_12_21020001 chr2L_21020001 RAL-320 644 chr2L 21041132 21041168 chr2L 21049400 21049432 Tirant 10 8265 4.0 7.5 5.8 1.5 8300 chr2L 21041132 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049432 intron CG42238 - chr2L_10_21045001 chr2L_21045001 RAL-320 645 chr2L 21074904 21074949 chr2L 21075015 21075060 14 109 6.0 3.5 4.8 2.4 156 chr2L 21074904 intergenic tadr + chr2L 21074982 intergenic tadr + chr2L 21075060 intergenic tadr + chr2L_14_21070001 chr2L_21070001 RAL-320 646 chr2L 21110638 21110683 chr2L 21110743 21110788 8 105 5.0 5.0 5.0 1.3 150 chr2L 21110638 intron Nhe2 + chr2L 21110713 intron Nhe2 + chr2L 21110788 intron Nhe2 + chr2L_8_21110001 chr2L_21110001 RAL-320 647 chr2L 21144209 21144257 chr2L 21145806 21145846 15 1599 43.0 50.5 46.8 0.3 1637 chr2L 21144209 exon CG9253 + chr2L 21145028 exon CG9253 + chr2L 21145846 exon del - chr2L_15_21145001 chr2L_21145001 RAL-320 648 chr2L 21286587 21286626 chr2L 21286685 21286724 18 97 3.5 7.5 5.5 2.8 137 chr2L 21286587 exon Mio - chr2L 21286656 intron Mio - chr2L 21286724 intron Mio - chr2L_18_21285001 chr2L_21285001 RAL-320 649 chr2L 21347550 21347583 chr2L 21355042 21355075 blood 7 7490 4.0 2.5 3.2 1.7 7525 chr2L 21347550 intron Tsp39D + chr2L 21351312 intron Tsp39D + chr2L 21355075 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-320 650 chr2L 21355587 21355638 chr2L 21355752 21355752 11 158 5.0 3.0 4.0 2.2 165 chr2L 21355587 exon Tsp39D + chr2L 21355670 intron Tsp39D + chr2L 21355752 intron Tsp39D + chr2L_11_21355001 chr2L_21355001 RAL-320 651 chr2L 21357176 21357209 chr2L 21357496 21357534 11 323 5.5 5.0 5.2 1.8 358 chr2L 21357176 3` UTR Tsp39D + chr2L 21357355 3` UTR Tsp39D + chr2L 21357534 3` UTR Tsp39D + chr2L_11_21355001 chr2L_21355001 RAL-320 652 chr2L 21597027 21597057 chr2L 21604790 21604821 roo 12 7762 4.0 5.5 4.8 2.1 7794 chr2L 21597027 intergenic not near genes chr2L 21600924 intergenic not near genes chr2L 21604821 intergenic not near genes chr2L_12_21600001 chr2L_21600001 RAL-320 653 chr2L 21667488 21667537 chr2L 21667714 21667763 13 226 5.0 8.0 6.5 1.7 275 chr2L 21667488 intron CG2225 - chr2L 21667626 intron CG2225 - chr2L 21667763 intron CG2225 - chr2L_13_21665001 chr2L_21665001 RAL-320 654 chr2L 21691835 21691837 chr2L 21698296 21698327 Burdock 4 6471 9.5 5.5 7.5 0.5 6492 chr2L 21691835 intron CG31619 + chr2L 21695081 intron CG31619 + chr2L 21698327 intron CG31619 + chr2L_4_21695001 chr2L_21695001 RAL-320 655 chr2L 21691839 21691860 chr2L 21698295 21698329 Burdock 10 6470 4.5 5.5 5.0 1.7 6490 chr2L 21691839 intron CG31619 + chr2L 21695084 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_10_21695001 chr2L_21695001 RAL-320 656 chr2L 21750066 21750110 chr2L 21750319 21750339 16 247 5.0 3.5 4.2 3.1 273 chr2L 21750066 intron step - chr2L 21750202 intron step - chr2L 21750339 intron step - chr2L_16_21750001 chr2L_21750001 RAL-320 657 chr2L 21754640 21754691 chr2L 21754741 21754782 17 100 5.0 6.0 5.5 2.6 142 chr2L 21754640 intron step - chr2L 21754711 intron step - chr2L 21754782 intron step - chr2L_17_21750001 chr2L_21750001 RAL-320 658 chr2L 21809272 21809299 chr2L 21809392 21809428 12 128 5.5 6.5 6.0 1.7 156 chr2L 21809272 intergenic not near genes chr2L 21809350 intergenic not near genes chr2L 21809428 intergenic not near genes chr2L_12_21805001 chr2L_21805001 RAL-320 659 chr2L 21819307 21819356 chr2L 21819415 21819452 6 100 3.0 7.0 5.0 1.0 145 chr2L 21819307 intergenic CR44786 + chr2L 21819380 intergenic CR44786 + chr2L 21819452 intergenic CR44786 + chr2L_6_21815001 chr2L_21815001 RAL-320 660 chr2L 21840726 21840762 chr2L 21841233 21841285 9 518 2.0 2.0 2.0 3.0 559 chr2L 21840726 intergenic not near genes chr2L 21841006 intergenic not near genes chr2L 21841285 intergenic not near genes chr2L_9_21840001 chr2L_21840001 RAL-320 661 chr2L 21882579 21882607 chr2L 21882665 21882690 6 93 3.5 3.0 3.2 1.4 111 chr2L 21882579 intergenic not near genes chr2L 21882634 intergenic not near genes chr2L 21882690 intergenic not near genes chr2L_6_21880001 chr2L_21880001 RAL-320 662 chr2L 21981665 21981716 chr2L 21990850 21990872 roo 20 9179 4.0 4.0 4.0 4.0 9207 chr2L 21981665 exon CG2528 - chr2L 21986268 intron CG2528 - chr2L 21990872 exon CG2528 - chr2L_20_21985001 chr2L_21985001 RAL-320 663 chr2L 22025811 22025830 chr2L 22025909 22025929 5 99 9.0 6.5 7.8 0.6 118 chr2L 22025811 intergenic tio + chr2L 22025870 intergenic tio + chr2L 22025929 intergenic tio + chr2L_5_22025001 chr2L_22025001 RAL-320 664 chr2L 22025832 22025849 chr2L 22025908 22025948 7 92 6.0 6.0 6.0 1.0 116 chr2L 22025832 intergenic tio + chr2L 22025890 intergenic tio + chr2L 22025948 intergenic tio + chr2L_7_22025001 chr2L_22025001 RAL-320 665 chr2L 22047237 22047242 chr2L 22047382 22047387 5 145 6.5 7.0 6.8 0.6 150 chr2L 22047237 intergenic not near genes chr2L 22047312 intergenic not near genes chr2L 22047387 intergenic not near genes chr2L_5_22045001 chr2L_22045001 RAL-320 666 chr2L 22047249 22047254 chr2L 22047379 22047389 4 138 4.5 6.5 5.5 0.6 140 chr2L 22047249 intergenic not near genes chr2L 22047319 intergenic not near genes chr2L 22047389 intergenic not near genes chr2L_4_22045001 chr2L_22045001 RAL-320 667 chr2L 22192009 22192058 chr2L 22192118 22192147 6 99 3.5 6.5 5.0 1.0 138 chr2L 22192009 intron Ir40a - chr2L 22192078 intron Ir40a - chr2L 22192147 intron Ir40a - chr2L_6_22190001 chr2L_22190001 RAL-320 668 chr2L 22197882 22197907 chr2L 22198101 22198118 5 217 3.5 7.0 5.2 0.8 236 chr2L 22197882 intron Ir40a - chr2L 22198000 intron Ir40a - chr2L 22198118 intron Ir40a - chr2L_5_22195001 chr2L_22195001 RAL-320 669 chr2L 22212120 22212160 chr2L 22212687 22212727 5 567 2.5 5.0 3.8 1.0 607 chr2L 22212120 intron Ir40a - chr2L 22212424 intron Ir40a - chr2L 22212727 exon Ir40a - chr2L_5_22210001 chr2L_22210001 RAL-320 670 chr2L 22215891 22215935 chr2L 22215997 22216008 11 103 3.5 11.5 7.5 1.3 117 chr2L 22215891 intergenic not near genes chr2L 22215950 intergenic not near genes chr2L 22216008 intergenic not near genes chr2L_11_22215001 chr2L_22215001 RAL-320 671 chr2L 22239419 22239430 chr2L 22239514 22239519 5 97 8.0 7.0 7.5 0.6 100 chr2L 22239419 intron CR43765 - chr2L 22239469 3` UTR CR43765 - chr2L 22239519 3` UTR CR43765 - chr2L_5_22235001 chr2L_22235001 RAL-320 672 chr2L 22239438 22239461 chr2L 22239507 22239548 6 88 2.5 6.0 4.2 1.2 110 chr2L 22239438 3` UTR CR43765 - chr2L 22239493 3` UTR CR43765 - chr2L 22239548 3` UTR CR43765 - chr2L_6_22235001 chr2L_22235001 RAL-320 673 chr2L 22258607 22258646 chr2L 22260748 22260790 G6 21 2142 2.5 6.0 4.2 4.0 2183 chr2L 22258607 intergenic Tif-IA + chr2L 22259698 intergenic not near genes chr2L 22260790 intergenic not near genes chr2L_21_22255001 chr2L_22255001 RAL-320 674 chr2L 22294335 22294384 chr2L 22294443 22294492 12 108 4.5 1.0 2.8 3.2 157 chr2L 22294335 intergenic not near genes chr2L 22294414 intergenic not near genes chr2L 22294492 intergenic not near genes chr2L_12_22290001 chr2L_22290001 RAL-320 675 chr2L 22548921 22548933 chr2L 22550163 22550178 1360 7 1244 0.0 10.5 5.2 1.1 1257 chr2L 22548921 intergenic CG17490 + chr2L 22549550 intergenic not near genes chr2L 22550178 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RAL-320 676 chr2L 22548935 22548941 chr2L 22550150 22550186 1360 6 1239 0.0 7.0 3.5 1.3 1251 chr2L 22548935 intergenic CG17490 + chr2L 22549560 intergenic not near genes chr2L 22550186 intergenic CG17493 + chr2L_6_22545001 chr2L_22545001 RAL-320 677 chr2L 22558371 22558419 chr2L 22558702 22558750 17 329 3.0 5.0 4.0 3.4 379 chr2L 22558371 intergenic not near genes chr2L 22558560 intergenic not near genes chr2L 22558750 intergenic not near genes chr2L_17_22555001 chr2L_22555001 RAL-320 678 chr2L 22581953 22581991 chr2L 22583762 22583800 S-element 9 1809 6.5 0.0 3.2 2.1 1847 chr2L 22581953 intron CG17494 + chr2L 22582876 intron CG17494 + chr2L 22583800 intron CG17494 + chr2L_9_22580001 chr2L_22580001 RAL-320 679 chr2L 22716426 22716479 chr2L 22717847 22717900 INE-1 7 1414 3.0 5.0 4.0 1.4 1474 chr2L 22716426 intron CG40006 - chr2L 22717163 intron CG40006 - chr2L 22717900 intron CG40006 - chr2L_7_22715001 chr2L_22715001 RAL-320 680 chr2L 22776404 22776449 chr2L 22778213 22778258 S-element 23 1807 4.5 3.0 3.8 4.8 1854 chr2L 22776404 intergenic not near genes chr2L 22777331 intergenic not near genes chr2L 22778258 intergenic not near genes chr2L_23_22775001 chr2L_22775001 RAL-320 681 chr2L 22985606 22985648 chr2L 22985718 22985770 8 124 3.0 2.5 2.8 2.1 164 chr2L 22985606 intron cta + chr2L 22985688 intron cta + chr2L 22985770 intron cta + chr2L_8_22985001 chr2L_22985001 RAL-320 682 chr2R 469953 469976 chr2R 473213 473237 F-element 5 3258 3.5 6.5 5.0 0.8 3284 chr2R 469953 intergenic not near genes chr2R 471595 intergenic not near genes chr2R 473237 intergenic not near genes chr2R_5_470001 chr2R_470001 RAL-320 683 chr2R 528647 528681 chr2R 528740 528755 9 91 3.0 2.5 2.8 2.4 108 chr2R 528647 intron CG40378 + chr2R 528701 intron CG40378 + chr2R 528755 intron CG40378 + chr2R_9_525001 chr2R_525001 RAL-320 684 chr2R 552741 552785 chr2R 553974 554005 1360 10 1216 4.5 3.0 3.8 2.1 1264 chr2R 552741 intron CG40378 + chr2R 553373 intron CG40378 + chr2R 554005 intron CG40378 + chr2R_10_550001 chr2R_550001 RAL-320 685 chr2R 1082369 1082372 chr2R 1087138 1087148 Doc 7 4783 6.5 7.5 7.0 0.9 4779 chr2R 1082369 intron rl + chr2R 1084758 intron rl + chr2R 1087148 intron rl + chr2R_7_1080001 chr2R_1080001 RAL-320 686 chr2R 1082373 1082384 chr2R 1087134 1087149 Doc 6 4767 3.5 7.0 5.2 1.0 4776 chr2R 1082373 intron rl + chr2R 1084761 intron rl + chr2R 1087149 intron rl + chr2R_6_1080001 chr2R_1080001 RAL-320 687 chr2R 1365861 1365874 chr2R 1365978 1366006 5 125 6.0 3.5 4.8 0.9 145 chr2R 1365861 intron l(2)41Ab + chr2R 1365934 intron l(2)41Ab + chr2R 1366006 intron l(2)41Ab + chr2R_5_1365001 chr2R_1365001 RAL-320 688 chr2R 1365875 1365890 chr2R 1365976 1366022 8 118 4.0 3.0 3.5 1.8 147 chr2R 1365875 intron l(2)41Ab + chr2R 1365948 intron l(2)41Ab + chr2R 1366022 intron l(2)41Ab + chr2R_8_1365001 chr2R_1365001 RAL-320 689 chr2R 1516585 1516600 chr2R 1521333 1521347 1731 8 4748 15.5 10.5 13.0 0.6 4762 chr2R 1516585 exon Maf1 - chr2R 1518966 intron Maf1 - chr2R 1521347 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-320 690 chr2R 2015113 2015134 chr2R 2015210 2015231 4 97 10.5 2.5 6.5 0.5 118 chr2R 2015113 intron CG17684 - chr2R 2015172 intron CG17684 - chr2R 2015231 intron CG17684 - chr2R_4_2015001 chr2R_2015001 RAL-320 691 chr2R 2015137 2015164 chr2R 2015209 2015212 7 77 6.0 2.5 4.2 1.3 75 chr2R 2015137 intron CG17684 - chr2R 2015174 intron CG17684 - chr2R 2015212 intron CG17684 - chr2R_7_2015001 chr2R_2015001 RAL-320 692 chr2R 2110488 2110502 chr2R 2118066 2118080 17.6 4 7578 4.0 3.5 3.8 0.8 7592 chr2R 2110488 intron CG17684 - chr2R 2114284 intron CG17684 - chr2R 2118080 intron CG17684 - chr2R_4_2110001 chr2R_2110001 RAL-320 693 chr2R 2498965 2499013 chr2R 2508132 2508148 roo 7 9161 8.0 9.5 8.8 0.7 9183 chr2R 2498965 intron MFS17 - chr2R 2503556 intron MFS17 - chr2R 2508148 intron MFS17 - chr2R_7_2500001 chr2R_2500001 RAL-320 694 chr2R 2508317 2508335 chr2R 2508454 2508485 7 149 3.5 4.0 3.8 1.5 168 chr2R 2508317 intron MFS17 - chr2R 2508401 intron MFS17 - chr2R 2508485 intron MFS17 - chr2R_7_2505001 chr2R_2505001 RAL-320 695 chr2R 2746940 2746951 chr2R 2746998 2747005 4 64 1.0 3.0 2.0 1.3 65 chr2R 2746940 intergenic not near genes chr2R 2746972 intergenic not near genes chr2R 2747005 intergenic not near genes chr2R_4_2745001 chr2R_2745001 RAL-320 696 chr2R 3107726 3107745 chr2R 3108430 3108449 4 704 3.5 6.0 4.8 0.7 723 chr2R 3107726 intron CG42596 + chr2R 3108088 intron CG42596 + chr2R 3108449 intron CG42596 + chr2R_4_3105001 chr2R_3105001 RAL-320 697 chr2R 3291798 3291957 chr2R 3914992 3915106 8 623180 14.0 19.5 16.8 0.4 623308 chr2R 3291798 intergenic not near genes chr2R 3603452 intergenic not near genes chr2R 3915106 intron uex - chr2R_8_3600001 chr2R_3600001 RAL-320 698 chr2R 3532600 3532642 chr2R 3536063 3536105 Doc 7 3462 1.0 4.0 2.5 2.0 3505 chr2R 3532600 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536105 intergenic not near genes chr2R_7_3530001 chr2R_3530001 RAL-320 699 chr2R 3877484 3877519 chr2R 3877742 3877746 4 243 6.0 4.0 5.0 0.7 262 chr2R 3877484 intergenic not near genes chr2R 3877615 intergenic not near genes chr2R 3877746 intergenic not near genes chr2R_4_3875001 chr2R_3875001 RAL-320 700 chr2R 3291605 3291826 chr2R 3914746 3914905 5 623099 18.5 17.0 17.8 0.3 623300 chr2R 3291605 intergenic not near genes chr2R 3603255 intergenic not near genes chr2R 3914905 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-320 701 chr2R 4312937 4312987 chr2R 4313041 4313090 17 104 3.0 3.0 3.0 4.2 153 chr2R 4312937 intergenic not near genes chr2R 4313014 intergenic not near genes chr2R 4313090 intergenic not near genes chr2R_17_4310001 chr2R_4310001 RAL-320 702 chr2R 4602833 4602874 chr2R 4603198 4603231 10 348 3.5 5.0 4.2 1.9 398 chr2R 4602833 intron p120ctn + chr2R 4603032 intron p120ctn + chr2R 4603231 intron p120ctn + chr2R_10_4600001 chr2R_4600001 RAL-320 703 chr2R 4622944 4622982 chr2R 4624110 4624161 1360 11 1174 9.0 6.0 7.5 1.3 1217 chr2R 4622944 intergenic CR44101 - chr2R 4623552 intergenic not near genes chr2R 4624161 intergenic not near genes chr2R_11_4620001 chr2R_4620001 RAL-320 704 chr2R 4624624 4624633 chr2R 4626549 4626558 Bica 7 1924 12.0 8.0 10.0 0.6 1934 chr2R 4624624 intergenic not near genes chr2R 4625591 intergenic not near genes chr2R 4626558 intergenic not near genes chr2R_7_4625001 chr2R_4625001 RAL-320 705 chr2R 4624639 4624671 chr2R 4626548 4626590 Bica 15 1920 6.0 8.0 7.0 1.9 1951 chr2R 4624639 intergenic not near genes chr2R 4625614 intergenic not near genes chr2R 4626590 intergenic not near genes chr2R_15_4625001 chr2R_4625001 RAL-320 706 chr2R 4634165 4634186 chr2R 4634243 4634285 12 92 3.0 5.5 4.2 2.3 120 chr2R 4634165 intergenic not near genes chr2R 4634225 intergenic not near genes chr2R 4634285 intergenic not near genes chr2R_12_4630001 chr2R_4630001 RAL-320 707 chr2R 4702458 4702486 chr2R 4702616 4702639 6 157 4.0 2.5 3.2 1.4 181 chr2R 4702458 intron Nipped-B - chr2R 4702548 intron Nipped-B - chr2R 4702639 intron Nipped-B - chr2R_6_4700001 chr2R_4700001 RAL-320 708 chr2R 4750335 4750377 chr2R 4751500 4751537 1360 9 1166 3.5 3.5 3.5 2.0 1202 chr2R 4750335 intron conu + chr2R 4750936 intron conu + chr2R 4751537 intron conu + chr2R_9_4750001 chr2R_4750001 RAL-320 709 chr2R 4838854 4838859 chr2R 4840397 4840402 transib2 4 1543 14.0 6.5 10.2 0.4 1548 chr2R 4838854 intergenic not near genes chr2R 4839628 intergenic not near genes chr2R 4840402 intergenic not near genes chr2R_4_4835001 chr2R_4835001 RAL-320 710 chr2R 4838860 4838894 chr2R 4840395 4840436 transib2 7 1541 8.5 6.0 7.2 0.9 1576 chr2R 4838860 intergenic not near genes chr2R 4839648 intergenic not near genes chr2R 4840436 intergenic not near genes chr2R_7_4835001 chr2R_4835001 RAL-320 711 chr2R 4870723 4870739 chr2R 4871254 4871259 R1A1-element 6 529 4.0 5.0 4.5 1.1 536 chr2R 4870723 intergenic not near genes chr2R 4870991 intergenic not near genes chr2R 4871259 intergenic not near genes chr2R_6_4870001 chr2R_4870001 RAL-320 712 chr2R 4878669 4878704 chr2R 4887660 4887710 X-element 13 9002 3.0 6.5 4.8 2.2 9041 chr2R 4878669 intergenic not near genes chr2R 4883190 intergenic not near genes chr2R 4887710 intergenic not near genes chr2R_13_4880001 chr2R_4880001 RAL-320 713 chr2R 4940946 4940962 chr2R 4943416 4943416 8 2468 25.0 27.0 26.0 0.3 2470 chr2R 4940946 intron Ir41a + chr2R 4942181 intron Ir41a + chr2R 4943416 intron Ir41a + chr2R_8_4940001 chr2R_4940001 RAL-320 714 chr2R 4970234 4970275 chr2R 4970320 4970344 9 86 5.5 4.0 4.8 1.6 110 chr2R 4970234 intron Ir41a + chr2R 4970289 intron Ir41a + chr2R 4970344 intron Ir41a + chr2R_9_4970001 chr2R_4970001 RAL-320 715 chr2R 5009175 5009204 chr2R 5009253 5009280 7 83 4.5 2.5 3.5 1.6 105 chr2R 5009175 intron Ir41a + chr2R 5009228 intron Ir41a + chr2R 5009280 intron Ir41a + chr2R_7_5005001 chr2R_5005001 RAL-320 716 chr2R 5019257 5019311 chr2R 5019363 5019417 18 100 3.0 5.5 4.2 3.5 160 chr2R 5019257 intron Ir41a + chr2R 5019337 intron Ir41a + chr2R 5019417 intron Ir41a + chr2R_18_5015001 chr2R_5015001 RAL-320 717 chr2R 5075215 5075246 chr2R 5075353 5075369 4 138 6.0 0.0 3.0 1.0 154 chr2R 5075215 intergenic not near genes chr2R 5075292 intergenic not near genes chr2R 5075369 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-320 718 chr2R 5075248 5075370 chr2R 5075759 5075796 12 441 0.0 3.5 1.8 4.3 548 chr2R 5075248 intergenic not near genes chr2R 5075522 intergenic not near genes chr2R 5075796 intergenic not near genes chr2R_12_5075001 chr2R_5075001 RAL-320 719 chr2R 5125226 5125258 chr2R 5125564 5125581 7 333 3.5 2.5 3.0 1.8 355 chr2R 5125226 intron gus - chr2R 5125404 intron gus - chr2R 5125581 intron gus - chr2R_7_5125001 chr2R_5125001 RAL-320 720 chr2R 5144906 5144926 chr2R 5145002 5145004 6 93 3.0 3.0 3.0 1.5 98 chr2R 5144906 intron Atf6 + chr2R 5144955 intron Atf6 + chr2R 5145004 intron Atf6 + chr2R_6_5140001 chr2R_5140001 RAL-320 721 chr2R 5237331 5237368 chr2R 5237432 5237469 7 101 3.5 3.5 3.5 1.6 138 chr2R 5237331 intron Nipped-A - chr2R 5237400 intron Nipped-A - chr2R 5237469 intron Nipped-A - chr2R_7_5235001 chr2R_5235001 RAL-320 722 chr2R 5417976 5417987 chr2R 5420628 5420634 Burdock 4 2651 16.0 9.0 12.5 0.3 2658 chr2R 5417976 intron laccase2 + chr2R 5419305 intron laccase2 + chr2R 5420634 intron laccase2 + chr2R_4_5415001 chr2R_5415001 RAL-320 723 chr2R 5417990 5418026 chr2R 5420625 5420678 Burdock 11 2643 6.5 9.0 7.8 1.2 2688 chr2R 5417990 intron laccase2 + chr2R 5419334 intron laccase2 + chr2R 5420678 intron laccase2 + chr2R_11_5415001 chr2R_5415001 RAL-320 724 chr2R 5453134 5453169 chr2R 5453244 5453292 14 123 3.5 5.0 4.2 2.7 158 chr2R 5453134 intron laccase2 + chr2R 5453213 intron laccase2 + chr2R 5453292 exon laccase2 + chr2R_14_5450001 chr2R_5450001 RAL-320 725 chr2R 5472354 5472364 chr2R 5472469 5472479 4 114 11.5 7.0 9.2 0.4 125 chr2R 5472354 intron CG30440 - chr2R 5472416 intron CG30440 - chr2R 5472479 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-320 726 chr2R 5476333 5476384 chr2R 5476897 5476942 17 557 3.5 5.0 4.2 3.3 609 chr2R 5476333 intron CG30440 - chr2R 5476638 intron CG30440 - chr2R 5476942 intron CG30440 - chr2R_17_5475001 chr2R_5475001 RAL-320 727 chr2R 5484856 5484887 chr2R 5484949 5484981 6 92 0.5 5.5 3.0 1.5 125 chr2R 5484856 intron CG30440 - chr2R 5484918 intron CG30440 - chr2R 5484981 intron CG30440 - chr2R_6_5480001 chr2R_5480001 RAL-320 728 chr2R 5543198 5543222 chr2R 5547302 5547325 invader1 10 4103 0.0 9.0 4.5 1.8 4127 chr2R 5543198 intron CG30438 + chr2R 5545262 intron CG30438 + chr2R 5547325 intron CG30438 + chr2R_10_5545001 chr2R_5545001 RAL-320 729 chr2R 5581404 5581420 chr2R 5627633 5627638 4 46225 18.5 13.0 15.8 0.2 46234 chr2R 5581404 intergenic not near genes chr2R 5604521 intron Fis1 - chr2R 5627638 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-320 730 chr2R 5621376 5621384 chr2R 5621456 5621484 4 85 5.5 1.0 3.2 1.0 108 chr2R 5621376 intergenic not near genes chr2R 5621430 intergenic not near genes chr2R 5621484 intergenic not near genes chr2R_4_5620001 chr2R_5620001 RAL-320 731 chr2R 5710633 5710684 chr2R 5710727 5710781 14 89 3.0 2.5 2.8 3.7 148 chr2R 5710633 intron ap - chr2R 5710707 intron ap - chr2R 5710781 intron ap - chr2R_14_5710001 chr2R_5710001 RAL-320 732 chr2R 5724976 5725020 chr2R 5725226 5725270 19 249 6.0 3.0 4.5 3.5 294 chr2R 5724976 intron ap - chr2R 5725123 intron ap - chr2R 5725270 intron ap - chr2R_19_5725001 chr2R_5725001 RAL-320 733 chr2R 5750443 5750454 chr2R 5750544 5750566 6 108 7.0 3.5 5.2 1.0 123 chr2R 5750443 intergenic not near genes chr2R 5750504 intergenic not near genes chr2R 5750566 intergenic not near genes chr2R_6_5750001 chr2R_5750001 RAL-320 734 chr2R 5773039 5773059 chr2R 5773124 5773124 5 84 7.5 1.0 4.2 1.0 85 chr2R 5773039 3` UTR Gp210 + chr2R 5773082 3` UTR Gp210 + chr2R 5773124 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-320 735 chr2R 5790447 5790496 chr2R 5790552 5790599 14 103 4.5 4.5 4.5 2.5 152 chr2R 5790447 intergenic not near genes chr2R 5790523 intergenic not near genes chr2R 5790599 intergenic not near genes chr2R_14_5790001 chr2R_5790001 RAL-320 736 chr2R 5869257 5869297 chr2R 5874353 5874391 flea 17 5094 8.5 6.5 7.5 2.0 5134 chr2R 5869257 intergenic not near genes chr2R 5871824 intergenic not near genes chr2R 5874391 intergenic not near genes chr2R_17_5870001 chr2R_5870001 RAL-320 737 chr2R 5878911 5878935 chr2R 5879011 5879035 7 100 6.0 6.0 6.0 1.0 124 chr2R 5878911 intergenic CG44438 - chr2R 5878973 intergenic CG44438 - chr2R 5879035 intergenic CG44438 - chr2R_7_5875001 chr2R_5875001 RAL-320 738 chr2R 5878940 5878953 chr2R 5879009 5879044 8 94 4.5 5.5 5.0 1.3 104 chr2R 5878940 intergenic CG44438 - chr2R 5878992 intergenic CG44438 - chr2R 5879044 intergenic CG44438 - chr2R_8_5875001 chr2R_5875001 RAL-320 739 chr2R 5885349 5885378 chr2R 5885498 5885527 7 148 3.5 4.0 3.8 1.5 178 chr2R 5885349 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885527 5` UTR CR44125 + chr2R_7_5885001 chr2R_5885001 RAL-320 740 chr2R 5902139 5902187 chr2R 5909718 5909731 17.6 12 7575 1.5 5.0 3.2 2.9 7592 chr2R 5902139 intron CG43366 + chr2R 5905935 intron CG43366 + chr2R 5909731 intron CG43366 + chr2R_12_5905001 chr2R_5905001 RAL-320 741 chr2R 5939664 5939670 chr2R 5940871 5940887 INE-1 6 1215 4.5 9.5 7.0 0.8 1223 chr2R 5939664 intergenic not near genes chr2R 5940276 intergenic not near genes chr2R 5940887 intergenic not near genes chr2R_6_5940001 chr2R_5940001 RAL-320 742 chr2R 5951169 5951204 chr2R 5951278 5951302 13 107 2.5 9.0 5.8 1.9 133 chr2R 5951169 intergenic not near genes chr2R 5951236 intergenic not near genes chr2R 5951302 intergenic not near genes chr2R_13_5950001 chr2R_5950001 RAL-320 743 chr2R 5953063 5953098 chr2R 5953161 5953193 7 95 6.0 2.0 4.0 1.4 130 chr2R 5953063 intergenic not near genes chr2R 5953128 intergenic not near genes chr2R 5953193 intergenic not near genes chr2R_7_5950001 chr2R_5950001 RAL-320 744 chr2R 6037435 6037480 chr2R 6037540 6037585 21 102 1.0 6.0 3.5 4.7 150 chr2R 6037435 intron CG14591 - chr2R 6037510 intron CG14591 - chr2R 6037585 intron CG14591 - chr2R_21_6035001 chr2R_6035001 RAL-320 745 chr2R 6065730 6065783 chr2R 6065862 6065894 13 120 6.0 3.5 4.8 2.2 164 chr2R 6065730 intron CCHa2-R + chr2R 6065812 intron CCHa2-R + chr2R 6065894 exon CCHa2-R + chr2R_13_6065001 chr2R_6065001 RAL-320 746 chr2R 6088366 6088386 chr2R 6088479 6088499 12 111 4.5 8.0 6.2 1.7 133 chr2R 6088366 intergenic not near genes chr2R 6088432 intergenic not near genes chr2R 6088499 intergenic not near genes chr2R_12_6085001 chr2R_6085001 RAL-320 747 chr2R 6108668 6108705 chr2R 6108795 6108823 4 122 3.5 4.5 4.0 0.8 155 chr2R 6108668 intron EcR - chr2R 6108746 intron EcR - chr2R 6108823 intron EcR - chr2R_4_6105001 chr2R_6105001 RAL-320 748 chr2R 6126958 6126964 chr2R 6127061 6127092 5 121 5.0 10.0 7.5 0.6 134 chr2R 6126958 intron EcR - chr2R 6127025 intron EcR - chr2R 6127092 intron EcR - chr2R_5_6125001 chr2R_6125001 RAL-320 749 chr2R 6129309 6129355 chr2R 6129407 6129448 20 96 2.0 4.5 3.2 4.8 139 chr2R 6129309 intron EcR - chr2R 6129378 intron EcR - chr2R 6129448 intron EcR - chr2R_20_6125001 chr2R_6125001 RAL-320 750 chr2R 6168183 6168227 chr2R 6168279 6168303 19 100 4.0 2.0 3.0 4.8 120 chr2R 6168183 intron EcR - chr2R 6168243 intron EcR - chr2R 6168303 intron EcR - chr2R_19_6165001 chr2R_6165001 RAL-320 751 chr2R 6178101 6178140 chr2R 6178247 6178286 14 146 4.0 4.0 4.0 2.8 185 chr2R 6178101 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178286 intergenic not near genes chr2R_14_6175001 chr2R_6175001 RAL-320 752 chr2R 6194682 6194697 chr2R 6194771 6194780 6 92 4.5 10.0 7.2 0.7 98 chr2R 6194682 intron Ptr - chr2R 6194731 intron Ptr - chr2R 6194780 intron Ptr - chr2R_6_6190001 chr2R_6190001 RAL-320 753 chr2R 6530751 6530798 chr2R 6530851 6530898 18 100 2.5 2.5 2.5 5.1 147 chr2R 6530751 intron jing + chr2R 6530824 intron jing + chr2R 6530898 intron jing + chr2R_18_6530001 chr2R_6530001 RAL-320 754 chr2R 6579779 6579804 chr2R 6584886 6584911 flea 6 5107 3.5 7.0 5.2 1.0 5132 chr2R 6579779 intron jing + chr2R 6582345 intron jing + chr2R 6584911 intron jing + chr2R_6_6580001 chr2R_6580001 RAL-320 755 chr2R 6633182 6633230 chr2R 6633279 6633327 20 95 3.5 3.5 3.5 4.4 145 chr2R 6633182 intergenic Vha16-1 -,Trap1 - chr2R 6633254 intergenic Vha16-1 -,Trap1 - chr2R 6633327 intergenic Vha16-1 -,Trap1 - chr2R_20_6630001 chr2R_6630001 RAL-320 756 chr2R 6699578 6699622 chr2R 6699681 6699718 17 103 2.5 6.5 4.5 3.1 140 chr2R 6699578 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699718 intergenic Rab2 + chr2R_17_6695001 chr2R_6695001 RAL-320 757 chr2R 6806778 6806805 chr2R 6806883 6806910 5 103 3.5 4.5 4.0 1.0 132 chr2R 6806778 intergenic not near genes chr2R 6806844 intergenic not near genes chr2R 6806910 intergenic not near genes chr2R_5_6805001 chr2R_6805001 RAL-320 758 chr2R 6806808 6806817 chr2R 6806876 6806907 5 95 2.0 3.5 2.8 1.3 99 chr2R 6806808 intergenic not near genes chr2R 6806858 intergenic not near genes chr2R 6806907 intergenic not near genes chr2R_5_6805001 chr2R_6805001 RAL-320 759 chr2R 6952148 6952182 chr2R 6959748 6959777 opus 11 7599 2.0 5.0 3.5 2.4 7629 chr2R 6952148 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955962 intron,intron mim -,CheB42c - chr2R 6959777 intron,intron mim -,CheB42c - chr2R_11_6955001 chr2R_6955001 RAL-320 760 chr2R 7102630 7102669 chr2R 7102750 7102789 7 117 4.5 6.0 5.2 1.1 159 chr2R 7102630 intron esn + chr2R 7102710 intron esn + chr2R 7102789 intron esn + chr2R_7_7100001 chr2R_7100001 RAL-320 761 chr2R 7153153 7153163 chr2R 7153252 7153259 4 102 2.5 2.5 2.5 1.1 106 chr2R 7153153 intron,intron pk +,Spn43Ab - chr2R 7153206 intron,intron pk +,Spn43Ab - chr2R 7153259 intron,intron pk +,Spn43Ab - chr2R_4_7150001 chr2R_7150001 RAL-320 762 chr2R 7153185 7153192 chr2R 7153246 7153272 5 87 1.5 2.5 2.0 1.7 87 chr2R 7153185 intron,intron pk +,Spn43Ab - chr2R 7153228 intron,intron pk +,Spn43Ab - chr2R 7153272 intron,intron pk +,Spn43Ab - chr2R_5_7150001 chr2R_7150001 RAL-320 763 chr2R 7173768 7173810 chr2R 7174041 7174050 15 271 2.5 5.0 3.8 3.1 282 chr2R 7173768 intron pk + chr2R 7173909 intron pk + chr2R 7174050 intron pk + chr2R_15_7170001 chr2R_7170001 RAL-320 764 chr2R 7196555 7196590 chr2R 7201350 7201385 F-element 11 4794 6.5 0.5 3.5 2.4 4830 chr2R 7196555 intron pk + chr2R 7198970 intron pk + chr2R 7201385 intron pk + chr2R_11_7195001 chr2R_7195001 RAL-320 765 chr2R 7209848 7209874 chr2R 7217594 7217642 roo 7 7772 0.0 0.0 0.0 7.0 7794 chr2R 7209848 intron pk + chr2R 7213745 intron pk + chr2R 7217642 intron pk + chr2R_7_7210001 chr2R_7210001 RAL-320 766 chr2R 7235812 7235835 chr2R 7240913 7240947 jockey 8 5102 9.5 2.0 5.8 1.2 5135 chr2R 7235812 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240947 intergenic not near genes chr2R_8_7235001 chr2R_7235001 RAL-320 767 chr2R 7235837 7235849 chr2R 7240907 7240916 jockey 4 5075 8.0 1.5 4.8 0.7 5079 chr2R 7235837 intergenic not near genes chr2R 7238376 intergenic not near genes chr2R 7240916 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-320 768 chr2R 7252478 7252524 chr2R 7253261 7253307 11 776 6.0 5.5 5.8 1.6 829 chr2R 7252478 intergenic not near genes chr2R 7252892 intergenic not near genes chr2R 7253307 intergenic not near genes chr2R_11_7250001 chr2R_7250001 RAL-320 769 chr2R 7328125 7328150 chr2R 7328240 7328281 8 126 2.5 3.5 3.0 2.0 156 chr2R 7328125 intron,intron Dscam1 -,CR45129 + chr2R 7328203 intron,intron Dscam1 -,CR45129 + chr2R 7328281 intron,intron Dscam1 -,CR45129 + chr2R_8_7325001 chr2R_7325001 RAL-320 770 chr2R 7371733 7371779 chr2R 7371851 7371903 18 120 3.0 3.0 3.0 4.5 170 chr2R 7371733 intron Dscam1 - chr2R 7371818 intron Dscam1 - chr2R 7371903 intron Dscam1 - chr2R_18_7370001 chr2R_7370001 RAL-320 771 chr2R 7389551 7389599 chr2R 7389673 7389699 12 112 4.5 6.0 5.2 1.9 148 chr2R 7389551 intron CG11107 + chr2R 7389625 intron CG11107 + chr2R 7389699 intron CG11107 + chr2R_12_7385001 chr2R_7385001 RAL-320 772 chr2R 7417883 7418164 chr2R 7417989 7418263 23 100 6.0 8.0 7.0 2.9 380 chr2R 7417883 intergenic not near genes chr2R 7418073 intergenic not near genes chr2R 7418263 intergenic not near genes chr2R_23_7415001 chr2R_7415001 RAL-320 773 chr2R 7434878 7434913 chr2R 7439199 7439229 Juan 13 4321 5.0 7.5 6.2 1.8 4351 chr2R 7434878 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439229 intergenic not near genes chr2R_13_7435001 chr2R_7435001 RAL-320 774 chr2R 7563080 7563124 chr2R 7563176 7563222 14 96 2.5 4.0 3.2 3.3 142 chr2R 7563080 3` UTR Corin + chr2R 7563151 3` UTR Corin + chr2R 7563222 3` UTR Corin + chr2R_14_7560001 chr2R_7560001 RAL-320 775 chr2R 7608389 7608424 chr2R 7613612 7613627 I-element 12 5216 10.5 10.5 10.5 1.0 5238 chr2R 7608389 intron CG1358 - chr2R 7611008 intron CG1358 - chr2R 7613627 intron CG1358 - chr2R_12_7610001 chr2R_7610001 RAL-320 776 chr2R 7608425 7608434 chr2R 7613605 7613636 I-element 6 5202 8.0 7.0 7.5 0.7 5211 chr2R 7608425 intron CG1358 - chr2R 7611030 intron CG1358 - chr2R 7613636 intron CG1358 - chr2R_6_7610001 chr2R_7610001 RAL-320 777 chr2R 7642853 7642892 chr2R 7642953 7642977 23 95 4.5 4.0 4.2 4.4 124 chr2R 7642853 intron CG43340 + chr2R 7642915 intron CG43340 + chr2R 7642977 intron CG43340 + chr2R_23_7640001 chr2R_7640001 RAL-320 778 chr2R 7714072 7714115 chr2R 7714156 7714185 15 83 4.0 1.5 2.8 3.9 113 chr2R 7714072 exon CG1942 + chr2R 7714128 3` UTR CG1942 + chr2R 7714185 intergenic CG1942 + chr2R_15_7710001 chr2R_7710001 RAL-320 779 chr2R 7737895 7737903 chr2R 7737994 7738002 4 99 10.5 11.0 10.8 0.3 107 chr2R 7737895 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738002 intergenic not near genes chr2R_4_7735001 chr2R_7735001 RAL-320 780 chr2R 7815669 7815702 chr2R 7822143 7822191 Burdock 12 6481 4.0 7.0 5.5 1.8 6522 chr2R 7815669 intergenic CG1882 + chr2R 7818930 intergenic not near genes chr2R 7822191 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-320 781 chr2R 7869178 7869189 chr2R 7873984 7873995 Doc 6 4804 9.0 3.0 6.0 0.9 4817 chr2R 7869178 intron Dgk - chr2R 7871586 intron Dgk - chr2R 7873995 intron Dgk - chr2R_6_7870001 chr2R_7870001 RAL-320 782 chr2R 7897141 7897151 chr2R 7897236 7897260 6 105 0.0 7.5 3.8 1.2 119 chr2R 7897141 intron CG30377 + chr2R 7897200 intron CG30377 + chr2R 7897260 intron CG30377 + chr2R_6_7895001 chr2R_7895001 RAL-320 783 chr2R 7916418 7916454 chr2R 7916513 7916529 11 91 2.5 8.0 5.2 1.8 111 chr2R 7916418 5` UTR CG12159 - chr2R 7916474 5` UTR CG12159 - chr2R 7916529 intergenic CG12159 -,Cul1 + chr2R_11_7915001 chr2R_7915001 RAL-320 784 chr2R 7942912 7942960 chr2R 7943189 7943227 10 273 2.5 6.5 4.5 1.8 315 chr2R 7942912 intron CG14764 - chr2R 7943070 intron CG14764 - chr2R 7943227 intron CG14764 - chr2R_10_7940001 chr2R_7940001 RAL-320 785 chr2R 8018102 8018118 chr2R 8018215 8018231 5 113 8.0 5.5 6.8 0.6 129 chr2R 8018102 intergenic not near genes chr2R 8018166 intergenic not near genes chr2R 8018231 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-320 786 chr2R 8018120 8018141 chr2R 8018206 8018254 5 100 5.5 2.5 4.0 1.0 134 chr2R 8018120 intergenic not near genes chr2R 8018187 intergenic not near genes chr2R 8018254 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-320 787 chr2R 8026799 8026836 chr2R 8026895 8026932 8 96 4.5 2.5 3.5 1.8 133 chr2R 8026799 intergenic CR45267 + chr2R 8026866 intergenic CR45267 + chr2R 8026932 intergenic CR45267 + chr2R_8_8025001 chr2R_8025001 RAL-320 788 chr2R 8036236 8036282 chr2R 8036338 8036384 6 97 5.0 4.0 4.5 1.1 148 chr2R 8036236 intron Optix + chr2R 8036310 intron Optix + chr2R 8036384 intron Optix + chr2R_6_8035001 chr2R_8035001 RAL-320 789 chr2R 8067054 8067094 chr2R 8067158 8067198 19 103 6.5 8.5 7.5 2.2 144 chr2R 8067054 intron CG17977 - chr2R 8067126 exon CG17977 - chr2R 8067198 exon CG17977 - chr2R_19_8065001 chr2R_8065001 RAL-320 790 chr2R 8089239 8089288 chr2R 8089345 8089368 15 103 5.5 7.5 6.5 2.0 129 chr2R 8089239 3` UTR sut2 + chr2R 8089304 intergenic sut2 +,sut3 + chr2R 8089368 intergenic sut2 +,sut3 + chr2R_15_8085001 chr2R_8085001 RAL-320 791 chr2R 8105912 8105966 chr2R 8106023 8106077 13 107 1.5 6.0 3.8 2.7 165 chr2R 8105912 5` UTR Cul4 - chr2R 8105994 intron Cul4 - chr2R 8106077 5` UTR Cul4 - chr2R_13_8105001 chr2R_8105001 RAL-320 792 chr2R 8203730 8203776 chr2R 8203878 8203922 22 148 4.5 5.0 4.8 3.8 192 chr2R 8203730 intron LRP1 + chr2R 8203826 intron LRP1 + chr2R 8203922 intron LRP1 + chr2R_22_8200001 chr2R_8200001 RAL-320 793 chr2R 8209600 8209616 chr2R 8209686 8209693 4 82 7.0 8.5 7.8 0.5 93 chr2R 8209600 exon LRP1 + chr2R 8209646 intron LRP1 + chr2R 8209693 intron LRP1 + chr2R_4_8205001 chr2R_8205001 RAL-320 794 chr2R 8236021 8236058 chr2R 8236122 8236158 13 99 8.0 0.5 4.2 2.5 137 chr2R 8236021 intergenic not near genes chr2R 8236090 intergenic not near genes chr2R 8236158 intergenic not near genes chr2R_13_8235001 chr2R_8235001 RAL-320 795 chr2R 8330843 8330861 chr2R 8331349 8331360 roo 6 502 12.0 6.5 9.2 0.6 517 chr2R 8330843 intron pdm3 + chr2R 8331102 intron pdm3 + chr2R 8331360 intron pdm3 + chr2R_6_8330001 chr2R_8330001 RAL-320 796 chr2R 8330862 8330888 chr2R 8331347 8331394 roo 16 497 4.5 6.5 5.5 2.5 532 chr2R 8330862 intron pdm3 + chr2R 8331128 intron pdm3 + chr2R 8331394 intron pdm3 + chr2R_16_8330001 chr2R_8330001 RAL-320 797 chr2R 8355249 8355273 chr2R 8355353 8355377 9 104 2.5 4.0 3.2 2.1 128 chr2R 8355249 intron pdm3 + chr2R 8355313 intron pdm3 + chr2R 8355377 intron pdm3 + chr2R_9_8355001 chr2R_8355001 RAL-320 798 chr2R 8524947 8524975 chr2R 8525085 8525134 12 155 7.5 2.5 5.0 2.0 187 chr2R 8524947 intron mtt - chr2R 8525040 intron mtt - chr2R 8525134 intron mtt - chr2R_12_8525001 chr2R_8525001 RAL-320 799 chr2R 8612561 8612609 chr2R 8612658 8612706 13 97 3.5 4.0 3.8 2.7 145 chr2R 8612561 intron CG8642 - chr2R 8612634 intron CG8642 - chr2R 8612706 intron CG8642 - chr2R_13_8610001 chr2R_8610001 RAL-320 800 chr2R 8714710 8714721 chr2R 8714779 8714817 4 84 0.0 3.5 1.8 1.4 107 chr2R 8714710 3` UTR PGRP-SC1b + chr2R 8714764 3` UTR PGRP-SC1b + chr2R 8714817 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-320 801 chr2R 8722746 8722756 chr2R 8723007 8723017 pogo 7 261 15.0 3.5 9.2 0.7 271 chr2R 8722746 intron CG14767 - chr2R 8722882 intron CG14767 - chr2R 8723017 intron CG14767 - chr2R_7_8720001 chr2R_8720001 RAL-320 802 chr2R 8722762 8722793 chr2R 8723003 8723045 pogo 12 252 5.5 3.0 4.2 2.3 283 chr2R 8722762 intron CG14767 - chr2R 8722904 intron CG14767 - chr2R 8723045 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-320 803 chr2R 8777934 8777945 chr2R 8784158 8784169 diver 5 6224 2.0 12.5 7.2 0.6 6235 chr2R 8777934 intergenic not near genes chr2R 8781052 intergenic not near genes chr2R 8784169 intergenic not near genes chr2R_5_8780001 chr2R_8780001 RAL-320 804 chr2R 8801316 8801350 chr2R 8801411 8801460 17 105 8.0 0.5 4.2 3.3 144 chr2R 8801316 intron sns + chr2R 8801388 intron sns + chr2R 8801460 intron sns + chr2R_17_8800001 chr2R_8800001 RAL-320 805 chr2R 8827744 8827790 chr2R 8827840 8827886 19 95 5.5 7.0 6.2 2.6 142 chr2R 8827744 intron,3` UTR sns +,CG30350 + chr2R 8827815 intron sns + chr2R 8827886 intron sns + chr2R_19_8825001 chr2R_8825001 RAL-320 806 chr2R 8941555 8941600 chr2R 8941662 8941713 25 106 3.0 4.5 3.8 5.2 158 chr2R 8941555 intergenic CR44273 +,CG13748 + chr2R 8941634 5` UTR CR44273 + chr2R 8941713 5` UTR CR44273 + chr2R_25_8940001 chr2R_8940001 RAL-320 807 chr2R 8967109 8967162 chr2R 8967219 8967227 18 103 3.5 7.0 5.2 2.9 118 chr2R 8967109 intron CG8216 - chr2R 8967168 intron CG8216 - chr2R 8967227 intron CG8216 - chr2R_18_8965001 chr2R_8965001 RAL-320 808 chr2R 8983291 8983337 chr2R 8983392 8983440 9 99 4.5 4.0 4.2 1.7 149 chr2R 8983291 intron CG8213 - chr2R 8983366 intron CG8213 - chr2R 8983440 intron CG8213 - chr2R_9_8980001 chr2R_8980001 RAL-320 809 chr2R 9047416 9047433 chr2R 9047531 9047548 10 114 0.0 9.0 4.5 1.8 132 chr2R 9047416 intron CG13743 - chr2R 9047482 intron CG13743 - chr2R 9047548 intron CG13743 - chr2R_10_9045001 chr2R_9045001 RAL-320 810 chr2R 9052719 9052738 chr2R 9052803 9052812 10 94 3.0 5.0 4.0 2.0 93 chr2R 9052719 intron CG13743 - chr2R 9052766 intron CG13743 - chr2R 9052812 intron CG13743 - chr2R_10_9050001 chr2R_9050001 RAL-320 811 chr2R 9065897 9065922 chr2R 9065999 9066024 11 101 12.5 7.0 9.8 1.0 127 chr2R 9065897 intron ana + chr2R 9065960 intron ana + chr2R 9066024 intron ana + chr2R_11_9065001 chr2R_9065001 RAL-320 812 chr2R 9065923 9065948 chr2R 9065995 9066050 19 96 5.0 5.0 5.0 3.2 127 chr2R 9065923 intron ana + chr2R 9065986 intron ana + chr2R 9066050 intron ana + chr2R_19_9065001 chr2R_9065001 RAL-320 813 chr2R 9206079 9206130 chr2R 9206182 9206232 14 98 3.5 6.5 5.0 2.3 153 chr2R 9206079 exon CG8027 - chr2R 9206156 exon CG8027 - chr2R 9206232 exon CG8027 - chr2R_14_9205001 chr2R_9205001 RAL-320 814 chr2R 9212677 9212718 chr2R 9213183 9213201 roo 10 500 5.5 5.0 5.2 1.6 524 chr2R 9212677 intergenic CR45309 + chr2R 9212939 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_10_9210001 chr2R_9210001 RAL-320 815 chr2R 9267955 9268008 chr2R 9268061 9268114 16 104 5.0 5.5 5.2 2.6 159 chr2R 9267955 exon Pkn - chr2R 9268034 intron Pkn - chr2R 9268114 intron Pkn - chr2R_16_9265001 chr2R_9265001 RAL-320 816 chr2R 9331311 9331318 chr2R 9331410 9331418 4 100 3.5 8.5 6.0 0.6 107 chr2R 9331311 intron,intron CG13739 -,CG13954 - chr2R 9331364 intron,intron CG13739 -,CG13954 - chr2R 9331418 intron,intron CG13739 -,CG13954 - chr2R_4_9330001 chr2R_9330001 RAL-320 817 chr2R 9331321 9331336 chr2R 9331397 9331398 8 89 2.0 6.0 4.0 1.6 77 chr2R 9331321 intron,intron CG13739 -,CG13954 - chr2R 9331360 intron,intron CG13739 -,CG13954 - chr2R 9331398 intron,intron CG13739 -,CG13954 - chr2R_8_9330001 chr2R_9330001 RAL-320 818 chr2R 9368110 9368153 chr2R 9368201 9368232 8 82 4.0 0.5 2.2 2.5 122 chr2R 9368110 intron CG13954 - chr2R 9368171 intron CG13954 - chr2R 9368232 intron CG13954 - chr2R_8_9365001 chr2R_9365001 RAL-320 819 chr2R 9480055 9480110 chr2R 9490606 9490640 roo 13 10549 4.5 5.5 5.0 2.2 10585 chr2R 9480055 intergenic not near genes chr2R 9485348 intergenic not near genes chr2R 9490640 intergenic not near genes chr2R_13_9485001 chr2R_9485001 RAL-320 820 chr2R 9535590 9535640 chr2R 9535753 9535803 21 159 4.5 5.0 4.8 3.6 213 chr2R 9535590 intron brp + chr2R 9535696 intron brp + chr2R 9535803 intron brp + chr2R_21_9535001 chr2R_9535001 RAL-320 821 chr2R 9561842 9561850 chr2R 9561929 9561957 7 105 1.5 1.0 1.2 3.2 115 chr2R 9561842 3` UTR,intron CR45281 -,CG1809 + chr2R 9561900 3` UTR,intron CR45281 -,CG1809 + chr2R 9561957 3` UTR,intron CR45281 -,CG1809 + chr2R_7_9560001 chr2R_9560001 RAL-320 822 chr2R 9671166 9671183 chr2R 9671263 9671278 4 94 9.5 6.5 8.0 0.4 112 chr2R 9671166 intron Mmp2 - chr2R 9671222 intron Mmp2 - chr2R 9671278 intron Mmp2 - chr2R_4_9670001 chr2R_9670001 RAL-320 823 chr2R 9671187 9671217 chr2R 9671260 9671314 14 89 5.5 5.0 5.2 2.3 127 chr2R 9671187 intron Mmp2 - chr2R 9671250 intron Mmp2 - chr2R 9671314 intron Mmp2 - chr2R_14_9670001 chr2R_9670001 RAL-320 824 chr2R 9686677 9686731 chr2R 9686775 9686814 5 94 3.5 3.0 3.2 1.2 137 chr2R 9686677 intergenic not near genes chr2R 9686746 intergenic not near genes chr2R 9686814 intergenic not near genes chr2R_5_9685001 chr2R_9685001 RAL-320 825 chr2R 9709202 9709255 chr2R 9709309 9709347 23 97 4.0 8.5 6.2 3.2 145 chr2R 9709202 3` UTR CR44292 - chr2R 9709274 3` UTR CR44292 - chr2R 9709347 3` UTR CR44292 - chr2R_23_9705001 chr2R_9705001 RAL-320 826 chr2R 9726597 9726643 chr2R 9734168 9734199 17.6 12 7569 4.5 5.5 5.0 2.0 7602 chr2R 9726597 intron sqa - chr2R 9730398 intron sqa - chr2R 9734199 intron sqa - chr2R_12_9730001 chr2R_9730001 RAL-320 827 chr2R 9869953 9869983 chr2R 9870048 9870079 15 94 4.5 3.0 3.8 3.1 126 chr2R 9869953 intron cbx - chr2R 9870016 intron cbx - chr2R 9870079 intron cbx - chr2R_15_9870001 chr2R_9870001 RAL-320 828 chr2R 9871031 9871074 chr2R 9871525 9871570 roo 9 494 5.5 10.0 7.8 1.0 539 chr2R 9871031 intron cbx - chr2R 9871300 intron cbx - chr2R 9871570 intron,5` UTR cbx -,CG18446 + chr2R_9_9870001 chr2R_9870001 RAL-320 829 chr2R 9896815 9896841 chr2R 9896960 9896982 12 141 7.5 9.0 8.2 1.3 167 chr2R 9896815 exon CG30007 + chr2R 9896898 exon CG30007 + chr2R 9896982 exon CG30007 + chr2R_12_9895001 chr2R_9895001 RAL-320 830 chr2R 9945431 9945464 chr2R 9945631 9945680 BS 9 204 6.5 5.0 5.8 1.3 249 chr2R 9945431 intron Mef2 - chr2R 9945556 intron Mef2 - chr2R 9945680 intron Mef2 - chr2R_9_9945001 chr2R_9945001 RAL-320 831 chr2R 9971572 9971585 chr2R 9971872 9971877 6 295 3.0 7.0 5.0 1.0 305 chr2R 9971572 exon CG12134 + chr2R 9971724 exon CG12134 + chr2R 9971877 exon CG12134 + chr2R_6_9970001 chr2R_9970001 RAL-320 832 chr2R 9972495 9972521 chr2R 9972575 9972598 6 87 1.5 8.5 5.0 1.0 103 chr2R 9972495 intron CG12134 + chr2R 9972546 exon CG12134 + chr2R 9972598 exon CG12134 + chr2R_6_9970001 chr2R_9970001 RAL-320 833 chr2R 10005550 10005584 chr2R 10005667 10005682 10 115 5.5 4.5 5.0 1.7 132 chr2R 10005550 intron Pka-R2 - chr2R 10005616 intron Pka-R2 - chr2R 10005682 intron Pka-R2 - chr2R_10_10005001 chr2R_10005001 RAL-320 834 chr2R 10005830 10005874 chr2R 10007015 10007029 1360 8 1175 9.5 6.5 8.0 0.9 1199 chr2R 10005830 intron Pka-R2 - chr2R 10006430 intron Pka-R2 - chr2R 10007029 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-320 835 chr2R 10047797 10047825 chr2R 10047900 10047928 8 103 7.5 4.5 6.0 1.1 131 chr2R 10047797 intron oys - chr2R 10047862 intron oys - chr2R 10047928 intron oys - chr2R_8_10045001 chr2R_10045001 RAL-320 836 chr2R 10107161 10107211 chr2R 10107268 10107308 9 101 8.5 5.0 6.8 1.2 147 chr2R 10107161 intron 14-3-3zeta + chr2R 10107234 intron 14-3-3zeta + chr2R 10107308 intron 14-3-3zeta + chr2R_9_10105001 chr2R_10105001 RAL-320 837 chr2R 10176857 10176902 chr2R 10186044 10186089 roo 11 9187 3.5 3.5 3.5 2.4 9232 chr2R 10176857 intron KCNQ - chr2R 10181473 intron KCNQ - chr2R 10186089 intron KCNQ - chr2R_11_10180001 chr2R_10180001 RAL-320 838 chr2R 10203624 10203635 chr2R 10203729 10203730 5 103 12.0 4.0 8.0 0.6 106 chr2R 10203624 intergenic not near genes chr2R 10203677 intergenic not near genes chr2R 10203730 intergenic not near genes chr2R_5_10200001 chr2R_10200001 RAL-320 839 chr2R 10203636 10203660 chr2R 10203728 10203765 6 98 6.5 4.0 5.2 1.0 129 chr2R 10203636 intergenic not near genes chr2R 10203700 intergenic not near genes chr2R 10203765 intergenic not near genes chr2R_6_10200001 chr2R_10200001 RAL-320 840 chr2R 10216192 10216222 chr2R 10216290 10216320 6 95 2.5 4.5 3.5 1.3 128 chr2R 10216192 intron,intron CG12912 -,Hr46 - chr2R 10216256 intron,intron CG12912 -,Hr46 - chr2R 10216320 intron,intron CG12912 -,Hr46 - chr2R_6_10215001 chr2R_10215001 RAL-320 841 chr2R 10274802 10274809 chr2R 10274898 10274905 4 96 7.5 0.0 3.8 0.8 103 chr2R 10274802 intron CAP + chr2R 10274854 intron CAP + chr2R 10274905 intron CAP + chr2R_4_10270001 chr2R_10270001 RAL-320 842 chr2R 10313295 10313339 chr2R 10313409 10313438 9 112 2.0 8.0 5.0 1.5 143 chr2R 10313295 intergenic not near genes chr2R 10313366 intergenic not near genes chr2R 10313438 intergenic Ndg + chr2R_9_10310001 chr2R_10310001 RAL-320 843 chr2R 10318494 10318537 chr2R 10318600 10318643 16 104 1.0 5.0 3.0 4.0 149 chr2R 10318494 intron Ndg + chr2R 10318568 intron Ndg + chr2R 10318643 intron Ndg + chr2R_16_10315001 chr2R_10315001 RAL-320 844 chr2R 10409042 10409080 chr2R 10409142 10409180 13 99 0.0 4.0 2.0 4.3 138 chr2R 10409042 intron CG42732 - chr2R 10409111 intron CG42732 - chr2R 10409180 intron,exon CG42732 -,CG33477 - chr2R_13_10405001 chr2R_10405001 RAL-320 845 chr2R 10411784 10411837 chr2R 10411885 10411939 13 102 3.0 4.5 3.8 2.7 155 chr2R 10411784 intron CG42732 - chr2R 10411862 intron CG42732 - chr2R 10411939 intron CG42732 - chr2R_13_10410001 chr2R_10410001 RAL-320 846 chr2R 10454084 10454127 chr2R 10454181 10454224 15 94 3.5 7.5 5.5 2.3 140 chr2R 10454084 intron,intron Galphao +,Cyp49a1 - chr2R 10454154 intron,intron Galphao +,Cyp49a1 - chr2R 10454224 intron,intron Galphao +,Cyp49a1 - chr2R_15_10450001 chr2R_10450001 RAL-320 847 chr2R 10477146 10477192 chr2R 10477506 10477552 10 358 4.5 0.0 2.2 3.1 406 chr2R 10477146 intron whd - chr2R 10477349 intron whd - chr2R 10477552 intron whd - chr2R_10_10475001 chr2R_10475001 RAL-320 848 chr2R 10562169 10562219 chr2R 10562274 10562327 9 108 3.0 3.5 3.2 2.1 158 chr2R 10562169 exon psq + chr2R 10562248 intron psq + chr2R 10562327 intron psq + chr2R_9_10560001 chr2R_10560001 RAL-320 849 chr2R 10563227 10563242 chr2R 10563344 10563348 5 115 0.0 5.0 2.5 1.4 121 chr2R 10563227 intron psq + chr2R 10563288 intron psq + chr2R 10563348 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-320 850 chr2R 10563903 10563923 chr2R 10564114 10564134 7 211 0.0 5.5 2.8 1.8 231 chr2R 10563903 intron psq + chr2R 10564018 intron psq + chr2R 10564134 intron psq + chr2R_7_10560001 chr2R_10560001 RAL-320 851 chr2R 10574605 10574637 chr2R 10574707 10574739 7 100 9.0 6.0 7.5 0.8 134 chr2R 10574605 intron psq + chr2R 10574672 intron psq + chr2R 10574739 intron psq + chr2R_7_10570001 chr2R_10570001 RAL-320 852 chr2R 10577444 10577448 chr2R 10577549 10577553 4 105 14.5 3.5 9.0 0.4 109 chr2R 10577444 intron psq + chr2R 10577498 intron psq + chr2R 10577553 intron psq + chr2R_4_10575001 chr2R_10575001 RAL-320 853 chr2R 10577450 10577477 chr2R 10577548 10577582 12 104 11.0 3.5 7.2 1.5 132 chr2R 10577450 intron psq + chr2R 10577516 intron psq + chr2R 10577582 intron psq + chr2R_12_10575001 chr2R_10575001 RAL-320 854 chr2R 10582098 10582129 chr2R 10582213 10582244 12 113 5.0 0.0 2.5 3.4 146 chr2R 10582098 intron psq + chr2R 10582171 intron psq + chr2R 10582244 intron psq + chr2R_12_10580001 chr2R_10580001 RAL-320 855 chr2R 10585573 10585587 chr2R 10594156 10594161 Tirant 5 8585 6.5 2.5 4.5 0.9 8588 chr2R 10585573 intron psq + chr2R 10589867 intron psq + chr2R 10594161 intron psq + chr2R_5_10585001 chr2R_10585001 RAL-320 856 chr2R 10622335 10622365 chr2R 10637120 10637144 mdg1 10 14782 7.5 4.5 6.0 1.4 14809 chr2R 10622335 intron CG11883 + chr2R 10629740 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_10_10625001 chr2R_10625001 RAL-320 857 chr2R 10705090 10705119 chr2R 10705492 10705543 12 418 7.5 6.5 7.0 1.5 453 chr2R 10705090 intron stan + chr2R 10705316 intron stan + chr2R 10705543 intron stan + chr2R_12_10705001 chr2R_10705001 RAL-320 858 chr2R 10851163 10851216 chr2R 10851268 10851321 12 105 3.5 4.5 4.0 2.4 158 chr2R 10851163 intron CG30015 - chr2R 10851242 intron CG30015 - chr2R 10851321 intron CG30015 - chr2R_12_10850001 chr2R_10850001 RAL-320 859 chr2R 10860582 10860589 chr2R 10860678 10860685 4 96 0.0 1.5 0.8 2.2 103 chr2R 10860582 intron CG30015 - chr2R 10860634 intron CG30015 - chr2R 10860685 intron CG30015 - chr2R_4_10860001 chr2R_10860001 RAL-320 860 chr2R 10947072 10947091 chr2R 10947179 10947188 5 105 9.5 0.0 4.8 0.9 116 chr2R 10947072 5` UTR CR45228 + chr2R 10947130 intergenic CR45228 + chr2R 10947188 intergenic CR45228 + chr2R_5_10945001 chr2R_10945001 RAL-320 861 chr2R 10948032 10948060 chr2R 10955578 10955615 17.6 6 7547 1.0 4.5 2.8 1.6 7583 chr2R 10948032 intergenic not near genes chr2R 10951824 intergenic not near genes chr2R 10955615 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-320 862 chr2R 10959073 10959103 chr2R 10959171 10959172 10 88 1.0 1.5 1.2 4.5 99 chr2R 10959073 intergenic not near genes chr2R 10959122 intergenic not near genes chr2R 10959172 intergenic not near genes chr2R_10_10955001 chr2R_10955001 RAL-320 863 chr2R 10979648 10979672 chr2R 10980136 10980154 297 10 487 3.0 6.5 4.8 1.7 506 chr2R 10979648 intergenic not near genes chr2R 10979901 intergenic not near genes chr2R 10980154 intergenic not near genes chr2R_10_10975001 chr2R_10975001 RAL-320 864 chr2R 10979676 10979685 chr2R 10980134 10980173 297 6 475 1.5 5.5 3.5 1.3 497 chr2R 10979676 intergenic not near genes chr2R 10979924 intergenic not near genes chr2R 10980173 intergenic not near genes chr2R_6_10975001 chr2R_10975001 RAL-320 865 chr2R 11009804 11009848 chr2R 11018992 11018997 roo 9 9180 2.5 1.0 1.8 3.2 9193 chr2R 11009804 intron luna - chr2R 11014400 intron luna - chr2R 11018997 intron luna - chr2R_9_11010001 chr2R_11010001 RAL-320 866 chr2R 11019891 11019905 chr2R 11024951 11024991 jockey 6 5077 2.5 6.5 4.5 1.1 5100 chr2R 11019891 intron luna - chr2R 11022441 intron luna - chr2R 11024991 intron luna - chr2R_6_11020001 chr2R_11020001 RAL-320 867 chr2R 11084904 11084938 chr2R 11085215 11085251 5 301 3.5 8.0 5.8 0.7 347 chr2R 11084904 intron luna - chr2R 11085078 intron luna - chr2R 11085251 intron luna - chr2R_5_11085001 chr2R_11085001 RAL-320 868 chr2R 11134095 11134143 chr2R 11134356 11134404 pogo 15 261 5.0 6.5 5.8 2.2 309 chr2R 11134095 intergenic not near genes chr2R 11134250 intergenic not near genes chr2R 11134404 intergenic not near genes chr2R_15_11130001 chr2R_11130001 RAL-320 869 chr2R 11207804 11207830 chr2R 11208012 11208043 BS 6 209 9.0 7.5 8.2 0.7 239 chr2R 11207804 intron shn + chr2R 11207924 intron shn + chr2R 11208043 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-320 870 chr2R 11207831 11207845 chr2R 11208008 11208058 BS 8 201 6.0 6.0 6.0 1.1 227 chr2R 11207831 intron shn + chr2R 11207944 intron shn + chr2R 11208058 intron shn + chr2R_8_11205001 chr2R_11205001 RAL-320 871 chr2R 11297619 11297637 chr2R 11301963 11301976 flea 10 4343 3.0 0.5 1.8 3.6 4357 chr2R 11297619 intergenic CG42336 - chr2R 11299798 intergenic not near genes chr2R 11301976 5` UTR CG7741 + chr2R_10_11295001 chr2R_11295001 RAL-320 872 chr2R 11366161 11366175 chr2R 11366243 11366263 10 91 6.0 3.0 4.5 1.8 102 chr2R 11366161 intergenic not near genes chr2R 11366212 intergenic CG13204 + chr2R 11366263 intergenic CG13204 + chr2R_10_11365001 chr2R_11365001 RAL-320 873 chr2R 11368009 11368055 chr2R 11368105 11368151 11 94 2.0 6.5 4.2 2.1 142 chr2R 11368009 intron CG13204 + chr2R 11368080 intron CG13204 + chr2R 11368151 intron CG13204 + chr2R_11_11365001 chr2R_11365001 RAL-320 874 chr2R 11415533 11415551 chr2R 11418665 11418701 opus 9 3140 3.0 5.5 4.2 1.7 3168 chr2R 11415533 intron Drip - chr2R 11417117 intron Drip - chr2R 11418701 intron Drip - chr2R_9_11415001 chr2R_11415001 RAL-320 875 chr2R 11439202 11439220 chr2R 11439267 11439308 8 79 3.5 5.5 4.5 1.5 106 chr2R 11439202 intron CG7777 + chr2R 11439255 intron CG7777 + chr2R 11439308 intron CG7777 + chr2R_8_11435001 chr2R_11435001 RAL-320 876 chr2R 11472627 11472674 chr2R 11473846 11473858 pogo 12 1211 7.0 6.5 6.8 1.5 1231 chr2R 11472627 intergenic not near genes chr2R 11473242 intergenic not near genes chr2R 11473858 intergenic not near genes chr2R_12_11470001 chr2R_11470001 RAL-320 877 chr2R 11480789 11480834 chr2R 11480892 11480937 14 101 0.5 2.5 1.5 5.6 148 chr2R 11480789 intron inv + chr2R 11480863 intron inv + chr2R 11480937 intron inv + chr2R_14_11480001 chr2R_11480001 RAL-320 878 chr2R 11485094 11485145 chr2R 11485196 11485222 13 87 4.0 3.5 3.8 2.7 128 chr2R 11485094 intron inv + chr2R 11485158 intron inv + chr2R 11485222 intron inv + chr2R_13_11485001 chr2R_11485001 RAL-320 879 chr2R 11516779 11516826 chr2R 11516877 11516906 15 91 3.5 5.0 4.2 2.9 127 chr2R 11516779 intergenic not near genes chr2R 11516842 intergenic not near genes chr2R 11516906 intergenic not near genes chr2R_15_11515001 chr2R_11515001 RAL-320 880 chr2R 11561944 11561973 chr2R 11562042 11562070 6 96 8.0 7.5 7.8 0.7 126 chr2R 11561944 intergenic not near genes chr2R 11562007 intergenic not near genes chr2R 11562070 intergenic not near genes chr2R_6_11560001 chr2R_11560001 RAL-320 881 chr2R 11665830 11665836 chr2R 11665898 11665898 10 84 4.5 5.0 4.8 1.7 68 chr2R 11665830 intron,intron Roc2 -,Tret1-1 + chr2R 11665864 intron,intron Roc2 -,Tret1-1 + chr2R 11665898 intron,intron Roc2 -,Tret1-1 + chr2R_10_11665001 chr2R_11665001 RAL-320 882 chr2R 11835362 11835379 chr2R 11835573 11835615 5 220 2.0 6.5 4.2 1.0 253 chr2R 11835362 intron Sobp - chr2R 11835488 intron Sobp - chr2R 11835615 intron Sobp - chr2R_5_11835001 chr2R_11835001 RAL-320 883 chr2R 11934092 11934104 chr2R 11934166 11934194 5 83 6.0 3.0 4.5 0.9 102 chr2R 11934092 intergenic not near genes chr2R 11934143 intergenic not near genes chr2R 11934194 intergenic not near genes chr2R_5_11930001 chr2R_11930001 RAL-320 884 chr2R 11951051 11951096 chr2R 11953189 11953217 18 2135 22.0 20.0 21.0 0.8 2166 chr2R 11951051 intron CG13188 + chr2R 11952134 intron CG13188 + chr2R 11953217 intron CG13188 + chr2R_18_11950001 chr2R_11950001 RAL-320 885 chr2R 11951326 11951340 chr2R 11951423 11951437 4 97 8.0 2.0 5.0 0.7 111 chr2R 11951326 intron CG13188 + chr2R 11951382 intron CG13188 + chr2R 11951437 intron CG13188 + chr2R_4_11950001 chr2R_11950001 RAL-320 886 chr2R 11951341 11951372 chr2R 11951421 11951464 13 91 3.0 2.0 2.5 3.7 123 chr2R 11951341 intron CG13188 + chr2R 11951402 intron CG13188 + chr2R 11951464 intron CG13188 + chr2R_13_11950001 chr2R_11950001 RAL-320 887 chr2R 11950664 11950666 chr2R 11953602 11953623 8 2937 23.5 23.0 23.2 0.3 2959 chr2R 11950664 intron CG13188 + chr2R 11952144 intron CG13188 + chr2R 11953623 intron CG13188 + chr2R_8_11950001 chr2R_11950001 RAL-320 888 chr2R 8518775 8518792 chr2R 12066184 12066194 7 3547399 22.5 9.5 16.0 0.4 3547419 chr2R 8518775 intron mtt - chr2R 10292484 intron CAP + chr2R 12066194 intron CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-320 889 chr2R 12145920 12145954 chr2R 12148613 12148639 9 2684 36.5 34.0 35.2 0.2 2719 chr2R 12145920 exon Hen1 + chr2R 12147280 intron,intron Hen1 +,CG8878 - chr2R 12148639 intron,exon Hen1 +,CG8878 - chr2R_9_12145001 chr2R_12145001 RAL-320 890 chr2R 12185980 12186037 chr2R 12186095 12186152 50 110 7.5 14.0 10.8 4.2 172 chr2R 12185980 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_50_12185001 chr2R_12185001 RAL-320 891 chr2R 12185221 12185230 chr2R 12188126 12188135 6 2906 35.0 171.5 103.2 0.1 2914 chr2R 12185221 3` UTR,exon CG13175 +,CG33964 + chr2R 12186678 exon Cyp6g1 + chr2R 12188135 exon Cyp6g1 + chr2R_6_12185001 chr2R_12185001 RAL-320 892 chr2R 12187475 12187524 chr2R 12190071 12190122 47 2610 144.0 103.5 123.8 0.4 2647 chr2R 12187475 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_47_12185001 chr2R_12185001 RAL-320 893 chr2R 12235399 12235435 chr2R 12235523 12235534 13 130 1.5 3.5 2.5 3.7 135 chr2R 12235399 intergenic not near genes chr2R 12235466 intergenic not near genes chr2R 12235534 intergenic not near genes chr2R_13_12235001 chr2R_12235001 RAL-320 894 chr2R 12279040 12279058 chr2R 12279173 12279176 8 130 3.5 8.5 6.0 1.1 136 chr2R 12279040 intergenic Cam + chr2R 12279108 intergenic Cam + chr2R 12279176 intergenic Cam + chr2R_8_12275001 chr2R_12275001 RAL-320 895 chr2R 12481152 12481162 chr2R 12482949 12482957 roo 4 1799 4.5 4.0 4.2 0.8 1805 chr2R 12481152 exon Dh44-R2 + chr2R 12482054 intron Dh44-R2 + chr2R 12482957 intron Dh44-R2 + chr2R_4_12480001 chr2R_12480001 RAL-320 896 chr2R 12522416 12522459 chr2R 12522515 12522523 11 96 3.0 3.5 3.2 2.6 107 chr2R 12522416 exon CG33632 + chr2R 12522470 exon CG33632 + chr2R 12522523 exon CG33632 + chr2R_11_12520001 chr2R_12520001 RAL-320 897 chr2R 12527255 12527302 chr2R 12527484 12527531 13 225 4.0 6.0 5.0 2.2 276 chr2R 12527255 intergenic not near genes chr2R 12527393 intergenic not near genes chr2R 12527531 intergenic not near genes chr2R_13_12525001 chr2R_12525001 RAL-320 898 chr2R 12529259 12529270 chr2R 12529546 12529569 7 294 4.0 1.0 2.5 2.0 310 chr2R 12529259 5` UTR fra + chr2R 12529414 5` UTR fra + chr2R 12529569 5` UTR fra + chr2R_7_12525001 chr2R_12525001 RAL-320 899 chr2R 12529276 12529290 chr2R 12529535 12529578 6 279 3.0 1.0 2.0 2.0 302 chr2R 12529276 5` UTR fra + chr2R 12529427 5` UTR fra + chr2R 12529578 5` UTR fra + chr2R_6_12525001 chr2R_12525001 RAL-320 900 chr2R 12540475 12540497 chr2R 12540558 12540576 5 85 8.5 2.0 5.2 0.8 101 chr2R 12540475 intron fra + chr2R 12540526 intron fra + chr2R 12540576 intron fra + chr2R_5_12540001 chr2R_12540001 RAL-320 901 chr2R 12548497 12548547 chr2R 12548594 12548644 6 91 0.0 5.0 2.5 1.7 147 chr2R 12548497 intron fra + chr2R 12548570 intron fra + chr2R 12548644 intron fra + chr2R_6_12545001 chr2R_12545001 RAL-320 902 chr2R 12565567 12565597 chr2R 12565970 12566000 13 403 0.0 4.0 2.0 4.3 433 chr2R 12565567 intergenic not near genes chr2R 12565784 intergenic Cyp301a1 + chr2R 12566000 intergenic Cyp301a1 + chr2R_13_12565001 chr2R_12565001 RAL-320 903 chr2R 12643771 12643818 chr2R 12643866 12643915 15 91 4.0 1.0 2.5 4.3 144 chr2R 12643771 intron CG8785 - chr2R 12643843 intron CG8785 - chr2R 12643915 exon CG8785 - chr2R_15_12640001 chr2R_12640001 RAL-320 904 chr2R 12701188 12701197 chr2R 12701245 12701285 6 77 4.5 4.5 4.5 1.1 97 chr2R 12701188 intergenic wuc + chr2R 12701236 intergenic wuc + chr2R 12701285 intergenic wuc + chr2R_6_12700001 chr2R_12700001 RAL-320 905 chr2R 12707508 12707542 chr2R 12715893 12715907 roo 13 8384 3.5 0.0 1.8 4.6 8399 chr2R 12707508 intron CG42663 + chr2R 12711708 intron CG42663 + chr2R 12715907 intron CG42663 + chr2R_13_12710001 chr2R_12710001 RAL-320 906 chr2R 12771159 12771185 chr2R 12771428 12771454 11 268 2.5 4.0 3.2 2.6 295 chr2R 12771159 intergenic not near genes chr2R 12771306 intergenic not near genes chr2R 12771454 intergenic not near genes chr2R_11_12770001 chr2R_12770001 RAL-320 907 chr2R 12789307 12789323 chr2R 12797660 12797677 roo 6 8364 5.5 2.5 4.0 1.2 8370 chr2R 12789307 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797677 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-320 908 chr2R 12819435 12819444 chr2R 12824524 12824531 jockey 4 5088 9.0 8.5 8.8 0.4 5096 chr2R 12819435 intergenic not near genes chr2R 12821983 intergenic not near genes chr2R 12824531 intergenic not near genes chr2R_4_12820001 chr2R_12820001 RAL-320 909 chr2R 12819450 12819478 chr2R 12824521 12824548 jockey 9 5078 2.5 6.5 4.5 1.6 5098 chr2R 12819450 intergenic not near genes chr2R 12821999 intergenic not near genes chr2R 12824548 intergenic not near genes chr2R_9_12820001 chr2R_12820001 RAL-320 910 chr2R 12892317 12892362 chr2R 12892413 12892455 12 92 5.0 2.5 3.8 2.5 138 chr2R 12892317 intron vg + chr2R 12892386 intron vg + chr2R 12892455 intron vg + chr2R_12_12890001 chr2R_12890001 RAL-320 911 chr2R 12908483 12908499 chr2R 12908562 12908598 6 96 4.0 8.0 6.0 0.9 115 chr2R 12908483 intergenic not near genes chr2R 12908540 intergenic not near genes chr2R 12908598 intergenic not near genes chr2R_6_12905001 chr2R_12905001 RAL-320 912 chr2R 12982094 12982126 chr2R 12982268 12982300 9 171 2.0 0.5 1.2 4.1 206 chr2R 12982094 intergenic not near genes chr2R 12982197 intergenic not near genes chr2R 12982300 intergenic not near genes chr2R_9_12980001 chr2R_12980001 RAL-320 913 chr2R 13013975 13014023 chr2R 13014083 13014131 21 106 2.5 2.5 2.5 6.0 156 chr2R 13013975 intergenic not near genes chr2R 13014053 intergenic not near genes chr2R 13014131 intergenic not near genes chr2R_21_13010001 chr2R_13010001 RAL-320 914 chr2R 13024809 13024819 chr2R 13024934 13024949 4 128 3.5 5.0 4.2 0.8 140 chr2R 13024809 intergenic not near genes chr2R 13024879 intergenic not near genes chr2R 13024949 intergenic not near genes chr2R_4_13020001 chr2R_13020001 RAL-320 915 chr2R 13136822 13136869 chr2R 13141640 13141665 Doc 22 4814 5.0 6.5 5.8 3.2 4843 chr2R 13136822 exon Cap-G + chr2R 13139244 intron Cap-G + chr2R 13141665 intron Cap-G + chr2R_22_13135001 chr2R_13135001 RAL-320 916 chr2R 13167413 13167446 chr2R 13167527 13167560 12 113 10.0 0.0 5.0 2.0 147 chr2R 13167413 intron GLaz - chr2R 13167486 intron GLaz - chr2R 13167560 intron GLaz - chr2R_12_13165001 chr2R_13165001 RAL-320 917 chr2R 13249551 13249579 chr2R 13249660 13249678 7 108 8.0 1.5 4.8 1.2 127 chr2R 13249551 intron CG4712 - chr2R 13249614 intron CG4712 - chr2R 13249678 intron CG4712 - chr2R_7_13245001 chr2R_13245001 RAL-320 918 chr2R 13334249 13334301 chr2R 13334355 13334407 16 103 4.5 4.5 4.5 2.9 158 chr2R 13334249 intron CR44206 - chr2R 13334328 intron CR44206 - chr2R 13334407 intron CR44206 - chr2R_16_13330001 chr2R_13330001 RAL-320 919 chr2R 13372166 13372213 chr2R 13372265 13372285 14 92 3.5 6.5 5.0 2.3 119 chr2R 13372166 intergenic not near genes chr2R 13372226 intergenic not near genes chr2R 13372285 intergenic not near genes chr2R_14_13370001 chr2R_13370001 RAL-320 920 chr2R 13389015 13389019 chr2R 13389295 13389349 43 282 39.0 49.5 44.2 1.0 334 chr2R 13389015 intergenic CG43691 - chr2R 13389182 intergenic CG43691 - chr2R 13389349 intergenic CG43691 - chr2R_43_13385001 chr2R_13385001 RAL-320 921 chr2R 13431468 13431503 chr2R 13431567 13431602 13 98 3.5 0.5 2.0 4.3 134 chr2R 13431468 intron CG42321 - chr2R 13431535 intron CG42321 - chr2R 13431602 intron CG42321 - chr2R_13_13430001 chr2R_13430001 RAL-320 922 chr2R 13439088 13439137 chr2R 13439223 13439271 9 133 2.0 3.0 2.5 2.6 183 chr2R 13439088 intergenic CG42321 -,cnn - chr2R 13439180 intergenic CG42321 -,cnn - chr2R 13439271 intergenic cnn -,CG42321 - chr2R_9_13435001 chr2R_13435001 RAL-320 923 chr2R 13544542 13544587 chr2R 13544638 13544648 9 92 1.5 5.5 3.5 2.0 106 chr2R 13544542 intron CG6145 - chr2R 13544595 intron CG6145 - chr2R 13544648 intron CG6145 - chr2R_9_13540001 chr2R_13540001 RAL-320 924 chr2R 13554736 13554771 chr2R 13554835 13554866 5 98 0.0 5.5 2.8 1.3 130 chr2R 13554736 intron Roe1 + chr2R 13554801 intron Roe1 + chr2R 13554866 intron Roe1 + chr2R_5_13550001 chr2R_13550001 RAL-320 925 chr2R 13566245 13566271 chr2R 13566345 13566371 15 100 6.0 0.0 3.0 3.8 126 chr2R 13566245 intergenic not near genes chr2R 13566308 intergenic not near genes chr2R 13566371 intergenic not near genes chr2R_15_13565001 chr2R_13565001 RAL-320 926 chr2R 13629233 13629244 chr2R 13629329 13629340 5 96 0.0 3.0 1.5 2.0 107 chr2R 13629233 intron fas + chr2R 13629286 intron fas + chr2R 13629340 intron fas + chr2R_5_13625001 chr2R_13625001 RAL-320 927 chr2R 13650003 13650033 chr2R 13650118 13650120 5 109 29.5 25.5 27.5 0.2 117 chr2R 13650003 intron fas + chr2R 13650062 intron fas + chr2R 13650120 intron fas + chr2R_5_13650001 chr2R_13650001 RAL-320 928 chr2R 13653461 13653486 chr2R 13653742 13653767 12 278 14.0 2.0 8.0 1.3 306 chr2R 13653461 intron fas + chr2R 13653614 intron fas + chr2R 13653767 intron fas + chr2R_12_13650001 chr2R_13650001 RAL-320 929 chr2R 13653490 13653513 chr2R 13653741 13653744 12 253 8.5 1.5 5.0 2.0 254 chr2R 13653490 intron fas + chr2R 13653617 intron fas + chr2R 13653744 intron fas + chr2R_12_13650001 chr2R_13650001 RAL-320 930 chr2R 13684248 13684271 chr2R 13684346 13684354 8 93 5.5 2.0 3.8 1.7 106 chr2R 13684248 intron fas + chr2R 13684301 intron fas + chr2R 13684354 intron fas + chr2R_8_13680001 chr2R_13680001 RAL-320 931 chr2R 13709836 13709849 chr2R 13709949 13709962 8 113 4.0 10.0 7.0 1.0 126 chr2R 13709836 intron fas + chr2R 13709899 intron fas + chr2R 13709962 intron fas + chr2R_8_13705001 chr2R_13705001 RAL-320 932 chr2R 13728113 13728156 chr2R 13735790 13735833 opus 23 7677 6.5 5.0 5.8 3.4 7720 chr2R 13728113 intron fas + chr2R 13731973 intron fas + chr2R 13735833 intron fas + chr2R_23_13730001 chr2R_13730001 RAL-320 933 chr2R 13765069 13765106 chr2R 13765175 13765206 9 104 2.0 7.0 4.5 1.6 137 chr2R 13765069 intergenic not near genes chr2R 13765138 intergenic not near genes chr2R 13765206 intergenic not near genes chr2R_9_13765001 chr2R_13765001 RAL-320 934 chr2R 13768964 13769005 chr2R 13769083 13769099 12 110 6.5 5.5 6.0 1.7 135 chr2R 13768964 intergenic not near genes chr2R 13769032 intergenic not near genes chr2R 13769099 intergenic not near genes chr2R_12_13765001 chr2R_13765001 RAL-320 935 chr2R 13770507 13770527 chr2R 13770609 13770637 6 108 0.5 7.5 4.0 1.2 130 chr2R 13770507 intron Cpr50Ca + chr2R 13770572 intron Cpr50Ca + chr2R 13770637 intron Cpr50Ca + chr2R_6_13770001 chr2R_13770001 RAL-320 936 chr2R 13790310 13790335 chr2R 13790406 13790414 8 94 7.0 0.0 3.5 1.8 104 chr2R 13790310 intergenic not near genes chr2R 13790362 intergenic not near genes chr2R 13790414 intergenic not near genes chr2R_8_13790001 chr2R_13790001 RAL-320 937 chr2R 13793136 13793143 chr2R 13793232 13793239 4 96 3.5 3.5 3.5 0.9 103 chr2R 13793136 intergenic not near genes chr2R 13793188 intergenic not near genes chr2R 13793239 intergenic not near genes chr2R_4_13790001 chr2R_13790001 RAL-320 938 chr2R 13801365 13801386 chr2R 13801441 13801473 13 97 3.0 5.5 4.2 2.5 108 chr2R 13801365 intron Cpr50Cb + chr2R 13801419 intron Cpr50Cb + chr2R 13801473 intron Cpr50Cb + chr2R_13_13800001 chr2R_13800001 RAL-320 939 chr2R 13854931 13854977 chr2R 13855236 13855282 17 299 5.0 4.0 4.5 3.1 351 chr2R 13854931 intron,intron CG6553 -,CR44367 + chr2R 13855106 exon,5` UTR CG6553 -,CR44367 + chr2R 13855282 exon,5` UTR CG6553 -,CR44367 + chr2R_17_13855001 chr2R_13855001 RAL-320 940 chr2R 13905615 13905635 chr2R 13907581 13907609 Rt1a 7 1982 0.0 2.0 1.0 3.5 1994 chr2R 13905615 intron shot - chr2R 13906612 intron shot - chr2R 13907609 intron shot - chr2R_7_13905001 chr2R_13905001 RAL-320 941 chr2R 13925830 13925838 chr2R 13926026 13926034 5 196 7.0 3.5 5.2 0.8 204 chr2R 13925830 intron shot - chr2R 13925932 intron shot - chr2R 13926034 intron shot - chr2R_5_13925001 chr2R_13925001 RAL-320 942 chr2R 13925842 13925871 chr2R 13926025 13926062 10 190 4.0 3.0 3.5 2.2 220 chr2R 13925842 intron shot - chr2R 13925952 intron shot - chr2R 13926062 intron shot - chr2R_10_13925001 chr2R_13925001 RAL-320 943 chr2R 14053138 14053174 chr2R 14053237 14053269 6 97 2.5 5.5 4.0 1.2 131 chr2R 14053138 intron mam + chr2R 14053204 intron mam + chr2R 14053269 intron mam + chr2R_6_14050001 chr2R_14050001 RAL-320 944 chr2R 14054798 14054828 chr2R 14054900 14054933 9 104 1.0 3.5 2.2 2.8 135 chr2R 14054798 intron mam + chr2R 14054866 intron mam + chr2R 14054933 intron mam + chr2R_9_14050001 chr2R_14050001 RAL-320 945 chr2R 14141933 14141946 chr2R 14142058 14142071 7 125 12.5 8.0 10.2 0.6 138 chr2R 14141933 intergenic not near genes chr2R 14142002 intergenic not near genes chr2R 14142071 intergenic not near genes chr2R_7_14140001 chr2R_14140001 RAL-320 946 chr2R 14168354 14168392 chr2R 14168458 14168501 11 107 5.5 6.0 5.8 1.6 147 chr2R 14168354 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168428 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168501 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_11_14165001 chr2R_14165001 RAL-320 947 chr2R 14182863 14182897 chr2R 14182969 14183003 19 105 4.5 7.0 5.8 2.8 140 chr2R 14182863 intergenic cg + chr2R 14182933 intergenic cg + chr2R 14183003 intergenic cg + chr2R_19_14180001 chr2R_14180001 RAL-320 948 chr2R 14285038 14285050 chr2R 14285141 14285153 4 103 2.0 4.5 3.2 1.0 115 chr2R 14285038 intron Ih + chr2R 14285096 intron Ih + chr2R 14285153 intron Ih + chr2R_4_14285001 chr2R_14285001 RAL-320 949 chr2R 14294815 14294858 chr2R 14294910 14294953 21 97 2.5 6.5 4.5 3.8 138 chr2R 14294815 intron Ih + chr2R 14294884 intron Ih + chr2R 14294953 intron Ih + chr2R_21_14290001 chr2R_14290001 RAL-320 950 chr2R 14357539 14357575 chr2R 14357648 14357685 14 107 6.5 4.5 5.5 2.2 146 chr2R 14357539 intergenic CG8617 -,Arc1 - chr2R 14357612 intergenic Arc1 -,CG8617 - chr2R 14357685 intergenic Arc1 -,CG8617 - chr2R_14_14355001 chr2R_14355001 RAL-320 951 chr2R 14394210 14394228 chr2R 14399019 14399037 Doc 10 4809 8.0 6.5 7.2 1.2 4827 chr2R 14394210 intergenic not near genes chr2R 14396624 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_10_14395001 chr2R_14395001 RAL-320 952 chr2R 14467285 14467316 chr2R 14476447 14476485 roo 10 9160 4.0 10.5 7.2 1.2 9200 chr2R 14467285 intergenic not near genes chr2R 14471885 intergenic not near genes chr2R 14476485 5` UTR CR44462 + chr2R_10_14470001 chr2R_14470001 RAL-320 953 chr2R 14467318 14467326 chr2R 14476445 14476470 roo 4 9154 3.0 10.5 6.8 0.5 9152 chr2R 14467318 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476470 5` UTR CR44462 + chr2R_4_14470001 chr2R_14470001 RAL-320 954 chr2R 14497374 14497419 chr2R 14498557 14498584 1360 4 1177 0.0 4.5 2.2 1.2 1210 chr2R 14497374 3` UTR Cpsf160 - chr2R 14497979 intron Cpsf160 - chr2R 14498584 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-320 955 chr2R 14514463 14514471 chr2R 14514579 14514587 5 116 8.5 5.0 6.8 0.6 124 chr2R 14514463 intron,intron Cpr51A -,CG30197 + chr2R 14514525 intron,intron Cpr51A -,CG30197 + chr2R 14514587 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-320 956 chr2R 14530345 14530367 chr2R 14530454 14530476 4 109 8.5 2.0 5.2 0.6 131 chr2R 14530345 intron ttv + chr2R 14530410 intron ttv + chr2R 14530476 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-320 957 chr2R 14530742 14530774 chr2R 14530832 14530850 9 95 6.5 7.0 6.8 1.2 108 chr2R 14530742 intron ttv + chr2R 14530796 intron ttv + chr2R 14530850 intron ttv + chr2R_9_14530001 chr2R_14530001 RAL-320 958 chr2R 14543537 14543573 chr2R 14543635 14543666 7 105 2.5 10.5 6.5 0.9 129 chr2R 14543537 intron ttv + chr2R 14543602 intron ttv + chr2R 14543666 intron ttv + chr2R_7_14540001 chr2R_14540001 RAL-320 959 chr2R 14641394 14641444 chr2R 14641500 14641550 12 105 2.0 4.0 3.0 3.0 156 chr2R 14641394 intergenic not near genes chr2R 14641472 intergenic not near genes chr2R 14641550 intergenic not near genes chr2R_12_14640001 chr2R_14640001 RAL-320 960 chr2R 14659306 14659330 chr2R 14659405 14659423 9 96 9.5 5.0 7.2 1.1 117 chr2R 14659306 intergenic not near genes chr2R 14659364 intergenic not near genes chr2R 14659423 intergenic not near genes chr2R_9_14655001 chr2R_14655001 RAL-320 961 chr2R 14790356 14790374 chr2R 14790483 14790515 10 143 0.0 9.0 4.5 1.8 159 chr2R 14790356 intron kn - chr2R 14790436 intron kn - chr2R 14790515 intron kn - chr2R_10_14790001 chr2R_14790001 RAL-320 962 chr2R 14799871 14799896 chr2R 14799962 14799962 11 92 3.5 11.0 7.2 1.3 91 chr2R 14799871 intron kn - chr2R 14799916 intron kn - chr2R 14799962 intron kn - chr2R_11_14795001 chr2R_14795001 RAL-320 963 chr2R 14855022 14855031 chr2R 14855134 14855143 4 112 12.0 2.0 7.0 0.5 121 chr2R 14855022 5` UTR Ciao1 - chr2R 14855082 intergenic Ciao1 -,HPS1 + chr2R 14855143 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-320 964 chr2R 14855035 14855053 chr2R 14855132 14855150 6 95 6.0 2.0 4.0 1.2 115 chr2R 14855035 5` UTR Ciao1 - chr2R 14855092 intergenic Ciao1 -,HPS1 + chr2R 14855150 intergenic Ciao1 -,HPS1 + chr2R_6_14855001 chr2R_14855001 RAL-320 965 chr2R 14889199 14889203 chr2R 14897827 14897831 Max-element 4 8628 12.0 0.0 6.0 0.6 8632 chr2R 14889199 intergenic Cyp6a8 - chr2R 14893515 intergenic not near genes chr2R 14897831 intergenic not near genes chr2R_4_14890001 chr2R_14890001 RAL-320 966 chr2R 14889207 14889221 chr2R 14897815 14897835 Max-element 7 8619 8.0 0.0 4.0 1.4 8628 chr2R 14889207 intergenic Cyp6a8 - chr2R 14893521 intergenic not near genes chr2R 14897835 intergenic not near genes chr2R_7_14890001 chr2R_14890001 RAL-320 967 chr2R 14911681 14911727 chr2R 14911824 14911870 22 142 2.5 3.5 3.0 5.5 189 chr2R 14911681 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911870 intron CG10249 - chr2R_22_14910001 chr2R_14910001 RAL-320 968 chr2R 14913652 14913692 chr2R 14913782 14913822 9 130 0.0 1.5 0.8 5.0 170 chr2R 14913652 intron CG10249 - chr2R 14913737 intron CG10249 - chr2R 14913822 intron CG10249 - chr2R_9_14910001 chr2R_14910001 RAL-320 969 chr2R 14914331 14914343 chr2R 14914443 14914455 4 118 1.0 1.5 1.2 1.8 124 chr2R 14914331 intron CG10249 - chr2R 14914393 intron CG10249 - chr2R 14914455 intron CG10249 - chr2R_4_14910001 chr2R_14910001 RAL-320 970 chr2R 14919064 14919108 chr2R 14919170 14919214 13 106 1.0 4.0 2.5 3.7 150 chr2R 14919064 intron CG10249 - chr2R 14919139 intron CG10249 - chr2R 14919214 intron CG10249 - chr2R_13_14915001 chr2R_14915001 RAL-320 971 chr2R 14922123 14922226 chr2R 14922217 14922384 16 137 0.0 0.0 0.0 16.0 261 chr2R 14922123 intron CG10249 - chr2R 14922254 intron CG10249 - chr2R 14922384 intron CG10249 - chr2R_16_14920001 chr2R_14920001 RAL-320 972 chr2R 14955650 14955683 chr2R 14955759 14955787 12 107 9.0 0.5 4.8 2.1 137 chr2R 14955650 intron aPKC - chr2R 14955718 intron aPKC - chr2R 14955787 intron aPKC - chr2R_12_14955001 chr2R_14955001 RAL-320 973 chr2R 14968073 14968086 chr2R 14968171 14968184 7 98 0.0 4.0 2.0 2.3 111 chr2R 14968073 intron ckn + chr2R 14968128 intron ckn + chr2R 14968184 intron ckn + chr2R_7_14965001 chr2R_14965001 RAL-320 974 chr2R 14968452 14968470 chr2R 14968525 14968532 6 78 6.0 6.5 6.2 0.8 80 chr2R 14968452 intron ckn + chr2R 14968492 intron ckn + chr2R 14968532 intron ckn + chr2R_6_14965001 chr2R_14965001 RAL-320 975 chr2R 15004707 15004760 chr2R 15005056 15005109 jockey 21 348 5.5 3.5 4.5 3.8 402 chr2R 15004707 intergenic not near genes chr2R 15004908 intergenic not near genes chr2R 15005109 intergenic not near genes chr2R_21_15000001 chr2R_15000001 RAL-320 976 chr2R 15015440 15015483 chr2R 15022884 15022904 mdg1 16 7440 5.0 4.5 4.8 2.8 7464 chr2R 15015440 intron hbs + chr2R 15019172 intron hbs + chr2R 15022904 intron hbs + chr2R_16_15015001 chr2R_15015001 RAL-320 977 chr2R 15046606 15046630 chr2R 15046724 15046734 7 122 5.5 3.0 4.2 1.3 128 chr2R 15046606 intergenic not near genes chr2R 15046670 intergenic not near genes chr2R 15046734 intergenic not near genes chr2R_7_15045001 chr2R_15045001 RAL-320 978 chr2R 15084960 15084999 chr2R 15092029 15092068 297 13 7068 6.0 4.5 5.2 2.1 7108 chr2R 15084960 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092068 5` UTR CR44457 + chr2R_13_15085001 chr2R_15085001 RAL-320 979 chr2R 15095375 15095384 chr2R 15095442 15095446 6 72 7.0 9.5 8.2 0.7 71 chr2R 15095375 intergenic not near genes chr2R 15095410 intergenic not near genes chr2R 15095446 intergenic not near genes chr2R_6_15095001 chr2R_15095001 RAL-320 980 chr2R 15095386 15095398 chr2R 15095439 15095449 5 67 9.5 9.5 9.5 0.5 63 chr2R 15095386 intergenic not near genes chr2R 15095418 intergenic not near genes chr2R 15095449 intergenic not near genes chr2R_5_15095001 chr2R_15095001 RAL-320 981 chr2R 15100998 15101031 chr2R 15101108 15101143 12 112 7.5 3.5 5.5 1.8 145 chr2R 15100998 intergenic not near genes chr2R 15101070 intergenic not near genes chr2R 15101143 intergenic not near genes chr2R_12_15100001 chr2R_15100001 RAL-320 982 chr2R 15119321 15119340 chr2R 15127800 15127811 Tirant 6 8481 9.0 4.5 6.8 0.8 8490 chr2R 15119321 intron chn + chr2R 15123566 intron chn + chr2R 15127811 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-320 983 chr2R 15137952 15138002 chr2R 15138047 15138093 13 93 6.0 1.0 3.5 2.9 141 chr2R 15137952 intron chn + chr2R 15138022 intron chn + chr2R 15138093 intron chn + chr2R_13_15135001 chr2R_15135001 RAL-320 984 chr2R 15175784 15175835 chr2R 15176881 15176929 13 1091 3.0 5.0 4.0 2.6 1145 chr2R 15175784 intron igl + chr2R 15176356 intron igl + chr2R 15176929 intron igl + chr2R_13_15175001 chr2R_15175001 RAL-320 985 chr2R 15230364 15230368 chr2R 15230671 15230675 4 307 29.5 0.0 14.8 0.3 311 chr2R 15230364 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230675 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 RAL-320 986 chr2R 15259049 15259090 chr2R 15259153 15259179 15 102 6.5 6.5 6.5 2.0 130 chr2R 15259049 intron ItgalphaPS4 + chr2R 15259114 intron ItgalphaPS4 + chr2R 15259179 intron ItgalphaPS4 + chr2R_15_15255001 chr2R_15255001 RAL-320 987 chr2R 15296155 15296173 chr2R 15296242 15296254 7 97 3.0 3.0 3.0 1.8 99 chr2R 15296155 intron Trpm - chr2R 15296204 intron Trpm - chr2R 15296254 intron Trpm - chr2R_7_15295001 chr2R_15295001 RAL-320 988 chr2R 15330186 15330191 chr2R 15330340 15330344 4 154 2.0 2.5 2.2 1.2 158 chr2R 15330186 intergenic CR44371 - chr2R 15330265 intergenic CR44371 - chr2R 15330344 intergenic CR44371 - chr2R_4_15330001 chr2R_15330001 RAL-320 989 chr2R 15330196 15330239 chr2R 15330339 15330393 7 151 1.5 2.5 2.0 2.3 197 chr2R 15330196 intergenic CR44371 - chr2R 15330294 intergenic CR44371 - chr2R 15330393 intergenic CR44371 - chr2R_7_15330001 chr2R_15330001 RAL-320 990 chr2R 15363643 15363673 chr2R 15363742 15363762 11 93 7.5 6.0 6.8 1.4 119 chr2R 15363643 intron unc-5 + chr2R 15363702 intron unc-5 + chr2R 15363762 intron unc-5 + chr2R_11_15360001 chr2R_15360001 RAL-320 991 chr2R 15606117 15606129 chr2R 15606214 15606215 4 94 8.0 5.0 6.5 0.5 98 chr2R 15606117 intergenic not near genes chr2R 15606166 intergenic not near genes chr2R 15606215 intergenic not near genes chr2R_4_15605001 chr2R_15605001 RAL-320 992 chr2R 15645670 15645698 chr2R 15645774 15645803 5 110 5.5 0.5 3.0 1.2 133 chr2R 15645670 intron CG42524 + chr2R 15645736 intron CG42524 + chr2R 15645803 intron CG42524 + chr2R_5_15645001 chr2R_15645001 RAL-320 993 chr2R 15655974 15655980 chr2R 15656063 15656078 4 97 9.0 5.0 7.0 0.5 104 chr2R 15655974 intron CG42524 + chr2R 15656026 intron CG42524 + chr2R 15656078 intron CG42524 + chr2R_4_15655001 chr2R_15655001 RAL-320 994 chr2R 15655981 15656013 chr2R 15656061 15656113 16 98 4.0 5.0 4.5 2.9 132 chr2R 15655981 intron CG42524 + chr2R 15656047 intron CG42524 + chr2R 15656113 intron CG42524 + chr2R_16_15655001 chr2R_15655001 RAL-320 995 chr2R 15679089 15679131 chr2R 15679193 15679235 14 103 4.0 5.5 4.8 2.4 146 chr2R 15679089 intergenic CG8207 -,Vha14-1 - chr2R 15679162 intergenic CG8207 -,Vha14-1 - chr2R 15679235 intergenic Vha14-1 -,CG8207 - chr2R_14_15675001 chr2R_15675001 RAL-320 996 chr2R 15720749 15720796 chr2R 15720865 15720912 12 115 3.0 4.5 3.8 2.5 163 chr2R 15720749 intergenic not near genes chr2R 15720830 intergenic not near genes chr2R 15720912 intergenic not near genes chr2R_12_15720001 chr2R_15720001 RAL-320 997 chr2R 15752866 15752898 chr2R 15752947 15752994 5 90 4.5 0.5 2.5 1.4 128 chr2R 15752866 intron CG30089 + chr2R 15752930 intron CG30089 + chr2R 15752994 intron CG30089 + chr2R_5_15750001 chr2R_15750001 RAL-320 998 chr2R 15755222 15755248 chr2R 15755299 15755326 6 86 1.5 2.5 2.0 2.0 104 chr2R 15755222 intron CG30089 + chr2R 15755274 intron CG30089 + chr2R 15755326 intron CG30089 + chr2R_6_15755001 chr2R_15755001 RAL-320 999 chr2R 15828131 15828155 chr2R 15828311 15828335 5 180 0.0 2.5 1.2 2.3 204 chr2R 15828131 intron,intron tun +,Poxn - chr2R 15828233 intron,intron tun +,Poxn - chr2R 15828335 intron,intron tun +,Poxn - chr2R_5_15825001 chr2R_15825001 RAL-320 1000 chr2R 15833513 15833551 chr2R 15833610 15833630 7 90 5.5 3.5 4.5 1.3 117 chr2R 15833513 intron,intron tun +,Poxn - chr2R 15833572 intron,intron tun +,Poxn - chr2R 15833630 intron,intron tun +,Poxn - chr2R_7_15830001 chr2R_15830001 RAL-320 1001 chr2R 15858066 15858105 chr2R 15858164 15858174 7 93 1.0 3.5 2.2 2.2 108 chr2R 15858066 intron Gpo-1 - chr2R 15858120 intron Gpo-1 - chr2R 15858174 intron Gpo-1 - chr2R_7_15855001 chr2R_15855001 RAL-320 1002 chr2R 16037208 16037227 chr2R 16037305 16037323 5 95 5.0 12.5 8.8 0.5 115 chr2R 16037208 intron SP2353 + chr2R 16037266 intron SP2353 + chr2R 16037323 intron SP2353 + chr2R_5_16035001 chr2R_16035001 RAL-320 1003 chr2R 16245611 16245658 chr2R 16245719 16245766 15 106 6.0 3.0 4.5 2.7 155 chr2R 16245611 intron CngA - chr2R 16245688 intron CngA - chr2R 16245766 intron CngA - chr2R_15_16245001 chr2R_16245001 RAL-320 1004 chr2R 16352826 16352868 chr2R 16352926 16352959 14 102 6.5 0.0 3.2 3.3 133 chr2R 16352826 intergenic not near genes chr2R 16352892 intergenic not near genes chr2R 16352959 intergenic not near genes chr2R_14_16350001 chr2R_16350001 RAL-320 1005 chr2R 16380111 16380148 chr2R 16380221 16380235 9 111 4.5 3.0 3.8 1.9 124 chr2R 16380111 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380173 3` UTR CR45317 - chr2R 16380235 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_9_16380001 chr2R_16380001 RAL-320 1006 chr2R 16387975 16388024 chr2R 16388140 16388150 9 147 1.5 3.5 2.5 2.6 175 chr2R 16387975 intron Sema-2b + chr2R 16388062 intron Sema-2b + chr2R 16388150 intron Sema-2b + chr2R_9_16385001 chr2R_16385001 RAL-320 1007 chr2R 16489252 16489301 chr2R 16489356 16489373 11 98 4.5 7.0 5.8 1.6 121 chr2R 16489252 intergenic CG33459 + chr2R 16489312 intergenic CG33459 + chr2R 16489373 intergenic CG33459 + chr2R_11_16485001 chr2R_16485001 RAL-320 1008 chr2R 16503853 16503900 chr2R 16503962 16503994 16 106 7.0 2.5 4.8 2.8 141 chr2R 16503853 intron Sema-2a + chr2R 16503924 intron Sema-2a + chr2R 16503994 intron Sema-2a + chr2R_16_16500001 chr2R_16500001 RAL-320 1009 chr2R 16518025 16518074 chr2R 16518121 16518169 12 95 2.0 3.5 2.8 3.2 144 chr2R 16518025 intron Sema-2a + chr2R 16518097 intron Sema-2a + chr2R 16518169 intron Sema-2a + chr2R_12_16515001 chr2R_16515001 RAL-320 1010 chr2R 16538070 16538087 chr2R 16538184 16538201 6 114 5.0 6.0 5.5 0.9 131 chr2R 16538070 intergenic not near genes chr2R 16538136 intergenic not near genes chr2R 16538201 intergenic not near genes chr2R_6_16535001 chr2R_16535001 RAL-320 1011 chr2R 16544853 16544869 chr2R 16544958 16544974 6 105 0.0 0.0 0.0 6.0 121 chr2R 16544853 intergenic not near genes chr2R 16544914 intergenic not near genes chr2R 16544974 intergenic not near genes chr2R_6_16540001 chr2R_16540001 RAL-320 1012 chr2R 16546986 16547020 chr2R 16547086 16547112 4 94 0.0 0.0 0.0 4.0 126 chr2R 16546986 intergenic not near genes chr2R 16547049 intergenic not near genes chr2R 16547112 intergenic not near genes chr2R_4_16545001 chr2R_16545001 RAL-320 1013 chr2R 16552049 16552076 chr2R 16552136 16552174 5 93 4.0 5.0 4.5 0.9 125 chr2R 16552049 intergenic Syn2 + chr2R 16552112 intergenic Syn2 + chr2R 16552174 intergenic Syn2 + chr2R_5_16550001 chr2R_16550001 RAL-320 1014 chr2R 16571858 16571906 chr2R 16571973 16572021 19 115 2.5 4.0 3.2 4.5 163 chr2R 16571858 intergenic CG4927 + chr2R 16571940 intergenic CG4927 + chr2R 16572021 intergenic CG4927 + chr2R_19_16570001 chr2R_16570001 RAL-320 1015 chr2R 16617056 16617060 chr2R 16617155 16617159 4 99 6.5 7.0 6.8 0.5 103 chr2R 16617056 intron CG5065 + chr2R 16617108 intron CG5065 + chr2R 16617159 intron CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-320 1016 chr2R 16617070 16617081 chr2R 16617154 16617179 4 95 5.5 7.0 6.2 0.6 109 chr2R 16617070 intron CG5065 + chr2R 16617124 intron CG5065 + chr2R 16617179 intron CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-320 1017 chr2R 16705209 16705259 chr2R 16705356 16705371 18 140 1.0 4.5 2.8 4.7 162 chr2R 16705209 intron CG30463 - chr2R 16705290 intron CG30463 - chr2R 16705371 intron CG30463 - chr2R_18_16705001 chr2R_16705001 RAL-320 1018 chr2R 16713054 16713066 chr2R 16713158 16713170 6 104 0.0 7.0 3.5 1.3 116 chr2R 16713054 intron CG30463 - chr2R 16713112 intron CG30463 - chr2R 16713170 intron CG30463 - chr2R_6_16710001 chr2R_16710001 RAL-320 1019 chr2R 16740882 16740918 chr2R 16740978 16741027 10 93 6.0 6.5 6.2 1.4 145 chr2R 16740882 intergenic not near genes chr2R 16740954 intergenic not near genes chr2R 16741027 intergenic not near genes chr2R_10_16740001 chr2R_16740001 RAL-320 1020 chr2R 16775652 16775675 chr2R 16775923 16775962 10 282 5.0 4.0 4.5 1.8 310 chr2R 16775652 3` UTR Arp53D + chr2R 16775807 intergenic Arp53D + chr2R 16775962 intergenic Arp53D + chr2R_10_16775001 chr2R_16775001 RAL-320 1021 chr2R 16787458 16787494 chr2R 16787560 16787575 8 94 6.5 5.0 5.8 1.2 117 chr2R 16787458 intron CG5522 + chr2R 16787516 intron CG5522 + chr2R 16787575 intron CG5522 + chr2R_8_16785001 chr2R_16785001 RAL-320 1022 chr2R 16800051 16800072 chr2R 16800137 16800173 6 87 0.0 3.0 1.5 2.4 122 chr2R 16800051 intergenic not near genes chr2R 16800112 intergenic not near genes chr2R 16800173 intergenic not near genes chr2R_6_16800001 chr2R_16800001 RAL-320 1023 chr2R 16839401 16839448 chr2R 16839504 16839551 21 101 5.5 0.5 3.0 5.2 150 chr2R 16839401 5` UTR CR43650 + chr2R 16839476 5` UTR CR43650 + chr2R 16839551 intergenic CR43650 + chr2R_21_16835001 chr2R_16835001 RAL-320 1024 chr2R 16918235 16918253 chr2R 16918309 16918339 5 82 4.0 1.5 2.8 1.3 104 chr2R 16918235 intergenic not near genes chr2R 16918287 intergenic not near genes chr2R 16918339 intergenic not near genes chr2R_5_16915001 chr2R_16915001 RAL-320 1025 chr2R 16975183 16975222 chr2R 16975280 16975319 8 96 3.0 4.5 3.8 1.7 136 chr2R 16975183 intron Cbp53E + chr2R 16975251 intron Cbp53E + chr2R 16975319 intron Cbp53E + chr2R_8_16975001 chr2R_16975001 RAL-320 1026 chr2R 17098648 17098653 chr2R 17098742 17098747 4 95 10.0 8.0 9.0 0.4 99 chr2R 17098648 intergenic GstS1 - chr2R 17098698 intergenic GstS1 - chr2R 17098747 intergenic GstS1 - chr2R_4_17095001 chr2R_17095001 RAL-320 1027 chr2R 17101096 17101100 chr2R 17101190 17101204 5 101 1.5 3.5 2.5 1.4 108 chr2R 17101096 intron CG30456 + chr2R 17101150 intron CG30456 + chr2R 17101204 intron CG30456 + chr2R_5_17100001 chr2R_17100001 RAL-320 1028 chr2R 17112458 17112507 chr2R 17112590 17112639 21 129 3.5 4.0 3.8 4.4 181 chr2R 17112458 intron CG15611 + chr2R 17112548 intron CG15611 + chr2R 17112639 intron CG15611 + chr2R_21_17110001 chr2R_17110001 RAL-320 1029 chr2R 17147229 17147263 chr2R 17152280 17152314 jockey 17 5051 3.5 9.0 6.2 2.4 5085 chr2R 17147229 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152314 intergenic not near genes chr2R_17_17145001 chr2R_17145001 RAL-320 1030 chr2R 17161334 17161357 chr2R 17161561 17161576 5 221 11.0 0.0 5.5 0.8 242 chr2R 17161334 intergenic not near genes chr2R 17161455 intergenic not near genes chr2R 17161576 intergenic not near genes chr2R_5_17160001 chr2R_17160001 RAL-320 1031 chr2R 17224947 17224997 chr2R 17225045 17225095 17 98 6.5 5.0 5.8 2.5 148 chr2R 17224947 intron mbl + chr2R 17225021 intron mbl + chr2R 17225095 intron mbl + chr2R_17_17225001 chr2R_17225001 RAL-320 1032 chr2R 17236491 17236538 chr2R 17241710 17241755 copia 10 5221 6.0 8.5 7.2 1.2 5264 chr2R 17236491 intron mbl + chr2R 17239123 intron mbl + chr2R 17241755 intron mbl + chr2R_10_17235001 chr2R_17235001 RAL-320 1033 chr2R 17253542 17253588 chr2R 17253671 17253688 22 127 4.0 7.0 5.5 3.4 146 chr2R 17253542 intron mbl + chr2R 17253615 intron mbl + chr2R 17253688 intron mbl + chr2R_22_17250001 chr2R_17250001 RAL-320 1034 chr2R 17389054 17389057 chr2R 17389163 17389166 4 109 0.0 4.5 2.2 1.2 112 chr2R 17389054 3` UTR CR44344 - chr2R 17389110 intergenic CR44344 - chr2R 17389166 intergenic CR44344 - chr2R_4_17385001 chr2R_17385001 RAL-320 1035 chr2R 17485913 17485948 chr2R 17490678 17490727 F-element 8 4768 8.5 3.5 6.0 1.1 4814 chr2R 17485913 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488320 intron NT5E-2 + chr2R 17490727 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 RAL-320 1036 chr2R 17629588 17629631 chr2R 17629687 17629696 15 96 3.0 3.0 3.0 3.8 108 chr2R 17629588 intron,intron CG10936 -,rhi - chr2R 17629642 intron,intron CG10936 -,rhi - chr2R 17629696 intron,intron CG10936 -,rhi - chr2R_15_17625001 chr2R_17625001 RAL-320 1037 chr2R 17644148 17644166 chr2R 17644236 17644263 6 98 7.5 6.5 7.0 0.8 115 chr2R 17644148 intergenic not near genes chr2R 17644206 intergenic not near genes chr2R 17644263 intergenic not near genes chr2R_6_17640001 chr2R_17640001 RAL-320 1038 chr2R 17679587 17679603 chr2R 17679729 17679750 7 146 0.0 2.0 1.0 3.5 163 chr2R 17679587 intron Sema-1b - chr2R 17679668 intron Sema-1b - chr2R 17679750 intron Sema-1b - chr2R_7_17675001 chr2R_17675001 RAL-320 1039 chr2R 17760654 17760691 chr2R 17760801 17760838 16 145 5.0 7.0 6.0 2.3 184 chr2R 17760654 intergenic HLH54F +,CG5009 + chr2R 17760746 intergenic CG5009 +,HLH54F + chr2R 17760838 intergenic CG5009 +,HLH54F + chr2R_16_17760001 chr2R_17760001 RAL-320 1040 chr2R 17782352 17782394 chr2R 17783575 17783601 pogo 13 1221 2.5 6.0 4.2 2.5 1249 chr2R 17782352 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783601 intergenic mir-31a - chr2R_13_17780001 chr2R_17780001 RAL-320 1041 chr2R 17784006 17784050 chr2R 17784267 17784280 pogo 17 257 4.5 3.0 3.8 3.5 274 chr2R 17784006 intergenic mir-31a - chr2R 17784143 intergenic mir-31a - chr2R 17784280 intergenic mir-31a - chr2R_17_17780001 chr2R_17780001 RAL-320 1042 chr2R 17812804 17812818 chr2R 17812902 17812916 4 98 5.0 6.5 5.8 0.6 112 chr2R 17812804 intron grh + chr2R 17812860 intron grh + chr2R 17812916 intron grh + chr2R_4_17810001 chr2R_17810001 RAL-320 1043 chr2R 17925028 17925052 chr2R 17925117 17925149 5 86 1.0 4.0 2.5 1.4 121 chr2R 17925028 exon Elk + chr2R 17925088 exon Elk + chr2R 17925149 exon Elk + chr2R_5_17925001 chr2R_17925001 RAL-320 1044 chr2R 17952104 17952150 chr2R 17952212 17952258 11 107 4.0 4.5 4.2 2.1 154 chr2R 17952104 intergenic not near genes chr2R 17952181 intergenic not near genes chr2R 17952258 intergenic not near genes chr2R_11_17950001 chr2R_17950001 RAL-320 1045 chr2R 17971105 17971129 chr2R 17971203 17971228 4 99 4.5 5.0 4.8 0.7 123 chr2R 17971105 intergenic not near genes chr2R 17971166 intergenic not near genes chr2R 17971228 intergenic not near genes chr2R_4_17970001 chr2R_17970001 RAL-320 1046 chr2R 17982905 17982952 chr2R 17983010 17983045 16 101 2.5 3.0 2.8 4.2 140 chr2R 17982905 intron dpr13 - chr2R 17982975 intron dpr13 - chr2R 17983045 intron dpr13 - chr2R_16_17980001 chr2R_17980001 RAL-320 1047 chr2R 18004923 18004963 chr2R 18005019 18005059 18 93 5.5 6.5 6.0 2.6 136 chr2R 18004923 intron dpr13 - chr2R 18004991 intron dpr13 - chr2R 18005059 intron dpr13 - chr2R_18_18000001 chr2R_18000001 RAL-320 1048 chr2R 18033658 18033658 chr2R 18033785 18033806 4 137 0.5 6.5 3.5 0.9 148 chr2R 18033658 intergenic not near genes chr2R 18033732 intergenic not near genes chr2R 18033806 intergenic not near genes chr2R_4_18030001 chr2R_18030001 RAL-320 1049 chr2R 18045653 18045696 chr2R 18046025 18046063 jockey 14 371 5.0 5.5 5.2 2.3 410 chr2R 18045653 intergenic not near genes chr2R 18045858 intergenic not near genes chr2R 18046063 intergenic CG5767 - chr2R_14_18045001 chr2R_18045001 RAL-320 1050 chr2R 18063513 18063516 chr2R 18063798 18063853 6 321 2.5 4.0 3.2 1.4 340 chr2R 18063513 intron CG34386 + chr2R 18063683 intron CG34386 + chr2R 18063853 intron CG34386 + chr2R_6_18060001 chr2R_18060001 RAL-320 1051 chr2R 18111664 18111715 chr2R 18115552 18115604 F-element 13 3883 3.5 6.0 4.8 2.2 3940 chr2R 18111664 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115604 intergenic not near genes chr2R_13_18110001 chr2R_18110001 RAL-320 1052 chr2R 18124321 18124326 chr2R 18124418 18124423 5 97 12.0 5.5 8.8 0.5 102 chr2R 18124321 intron stau - chr2R 18124372 intron stau - chr2R 18124423 intron stau - chr2R_5_18120001 chr2R_18120001 RAL-320 1053 chr2R 18124328 18124373 chr2R 18124415 18124430 12 84 5.0 5.5 5.2 1.9 102 chr2R 18124328 intron stau - chr2R 18124379 intron stau - chr2R 18124430 intron stau - chr2R_12_18120001 chr2R_18120001 RAL-320 1054 chr2R 18173181 18173222 chr2R 18173282 18173294 9 92 4.5 3.0 3.8 1.9 113 chr2R 18173181 intergenic CG10916 + chr2R 18173238 intergenic CG10916 + chr2R 18173294 intergenic CG10916 + chr2R_9_18170001 chr2R_18170001 RAL-320 1055 chr2R 18289412 18289459 chr2R 18289528 18289556 9 115 2.5 3.5 3.0 2.2 144 chr2R 18289412 intron,intron sbb -,CG14502 + chr2R 18289484 intron,intron sbb -,CG14502 + chr2R 18289556 exon,intron sbb -,CG14502 + chr2R_9_18285001 chr2R_18285001 RAL-320 1056 chr2R 18307558 18307560 chr2R 18307666 18307668 4 108 11.0 6.0 8.5 0.4 110 chr2R 18307558 intron sbb - chr2R 18307613 intron sbb - chr2R 18307668 intron sbb - chr2R_4_18305001 chr2R_18305001 RAL-320 1057 chr2R 18307561 18307607 chr2R 18307663 18307715 16 105 4.0 5.5 4.8 2.8 154 chr2R 18307561 intron sbb - chr2R 18307638 intron sbb - chr2R 18307715 intron sbb - chr2R_16_18305001 chr2R_18305001 RAL-320 1058 chr2R 18308264 18308271 chr2R 18308390 18308396 5 125 9.5 2.0 5.8 0.7 132 chr2R 18308264 intron sbb - chr2R 18308330 intron sbb - chr2R 18308396 intron sbb - chr2R_5_18305001 chr2R_18305001 RAL-320 1059 chr2R 18308273 18308319 chr2R 18308389 18308445 19 121 4.0 1.5 2.8 5.0 172 chr2R 18308273 intron sbb - chr2R 18308359 intron sbb - chr2R 18308445 intron sbb - chr2R_19_18305001 chr2R_18305001 RAL-320 1060 chr2R 18358378 18358397 chr2R 18372610 18372629 roo 13 14232 4.5 0.0 2.2 4.1 14251 chr2R 18358378 intergenic not near genes chr2R 18365504 intergenic not near genes chr2R 18372629 intergenic not near genes chr2R_13_18365001 chr2R_18365001 RAL-320 1061 chr2R 18376718 18376762 chr2R 18376828 18376862 16 105 4.5 5.0 4.8 2.8 144 chr2R 18376718 intergenic not near genes chr2R 18376790 intergenic not near genes chr2R 18376862 intergenic not near genes chr2R_16_18375001 chr2R_18375001 RAL-320 1062 chr2R 18401656 18401705 chr2R 18402440 18402489 6 788 27.0 33.0 30.0 0.2 833 chr2R 18401656 intergenic GstE3 + chr2R 18402072 intergenic not near genes chr2R 18402489 intergenic not near genes chr2R_6_18400001 chr2R_18400001 RAL-320 1063 chr2R 18405729 18405786 chr2R 18405830 18405885 9 100 1.5 0.5 1.0 4.5 156 chr2R 18405729 intergenic GstE6 +,GstE5 + chr2R 18405807 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_9_18405001 chr2R_18405001 RAL-320 1064 chr2R 18513290 18513343 chr2R 18513392 18513445 10 102 0.5 5.5 3.0 2.5 155 chr2R 18513290 intergenic not near genes chr2R 18513368 intergenic not near genes chr2R 18513445 intergenic not near genes chr2R_10_18510001 chr2R_18510001 RAL-320 1065 chr2R 18526585 18526619 chr2R 18526672 18526705 14 91 1.5 3.5 2.5 4.0 120 chr2R 18526585 intergenic CG43066 + chr2R 18526645 intergenic CG43066 + chr2R 18526705 intergenic CG43066 + chr2R_14_18525001 chr2R_18525001 RAL-320 1066 chr2R 18550558 18550610 chr2R 18550667 18550719 19 106 3.0 5.0 4.0 3.8 161 chr2R 18550558 intergenic not near genes chr2R 18550638 intergenic not near genes chr2R 18550719 intergenic not near genes chr2R_19_18550001 chr2R_18550001 RAL-320 1067 chr2R 18575811 18575812 chr2R 18582006 18582020 3S18 4 6200 5.5 12.0 8.8 0.4 6209 chr2R 18575811 intron GEFmeso - chr2R 18578916 intron GEFmeso - chr2R 18582020 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-320 1068 chr2R 18575814 18575821 chr2R 18581992 18582017 3S18 4 6191 5.5 12.5 9.0 0.4 6203 chr2R 18575814 intron GEFmeso - chr2R 18578916 intron GEFmeso - chr2R 18582017 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-320 1069 chr2R 18590860 18590896 chr2R 18600017 18600041 roo 9 9161 6.5 0.0 3.2 2.1 9181 chr2R 18590860 intron GEFmeso - chr2R 18595450 intron GEFmeso - chr2R 18600041 intron GEFmeso - chr2R_9_18595001 chr2R_18595001 RAL-320 1070 chr2R 18713218 18713273 chr2R 18713315 18713370 17 93 2.0 4.5 3.2 4.0 152 chr2R 18713218 intergenic not near genes chr2R 18713294 intergenic not near genes chr2R 18713370 intergenic not near genes chr2R_17_18710001 chr2R_18710001 RAL-320 1071 chr2R 18778191 18778227 chr2R 18778300 18778318 9 101 8.5 5.5 7.0 1.1 127 chr2R 18778191 intergenic not near genes chr2R 18778254 intergenic not near genes chr2R 18778318 intergenic not near genes chr2R_9_18775001 chr2R_18775001 RAL-320 1072 chr2R 18778597 18778607 chr2R 18778709 18778725 6 117 4.0 3.5 3.8 1.2 128 chr2R 18778597 intergenic not near genes chr2R 18778661 intergenic not near genes chr2R 18778725 intergenic not near genes chr2R_6_18775001 chr2R_18775001 RAL-320 1073 chr2R 18827695 18827722 chr2R 18827795 18827821 12 100 0.0 5.0 2.5 3.4 126 chr2R 18827695 intron CG15097 - chr2R 18827758 intron CG15097 - chr2R 18827821 intron CG15097 - chr2R_12_18825001 chr2R_18825001 RAL-320 1074 chr2R 18835884 18835894 chr2R 18835986 18835996 7 101 9.0 0.0 4.5 1.3 112 chr2R 18835884 intron CG15083 + chr2R 18835940 intron CG15083 + chr2R 18835996 intron CG15083 + chr2R_7_18835001 chr2R_18835001 RAL-320 1075 chr2R 18930432 18930485 chr2R 18930545 18930598 15 113 4.0 6.5 5.2 2.4 166 chr2R 18930432 intron sano + chr2R 18930515 intron sano + chr2R 18930598 intron sano + chr2R_15_18930001 chr2R_18930001 RAL-320 1076 chr2R 18953167 18953191 chr2R 18953274 18953298 6 106 2.5 6.0 4.2 1.2 131 chr2R 18953167 intron sano + chr2R 18953232 intron sano + chr2R 18953298 intron sano + chr2R_6_18950001 chr2R_18950001 RAL-320 1077 chr2R 19010744 19010772 chr2R 19010866 19010869 4 106 1.5 6.0 3.8 0.8 125 chr2R 19010744 intergenic not near genes chr2R 19010806 intergenic not near genes chr2R 19010869 intergenic not near genes chr2R_4_19010001 chr2R_19010001 RAL-320 1078 chr2R 19012930 19012968 chr2R 19013035 19013082 10 106 3.0 5.5 4.2 1.9 152 chr2R 19012930 intergenic not near genes chr2R 19013006 intergenic not near genes chr2R 19013082 intergenic not near genes chr2R_10_19010001 chr2R_19010001 RAL-320 1079 chr2R 19026026 19026057 chr2R 19026186 19026217 11 159 7.5 1.0 4.2 2.1 191 chr2R 19026026 intron 5-HT1B - chr2R 19026122 intron 5-HT1B - chr2R 19026217 intron 5-HT1B - chr2R_11_19025001 chr2R_19025001 RAL-320 1080 chr2R 19067718 19067754 chr2R 19067807 19067840 18 95 3.5 2.5 3.0 4.5 122 chr2R 19067718 intron 5-HT1A + chr2R 19067779 intron 5-HT1A + chr2R 19067840 intron 5-HT1A + chr2R_18_19065001 chr2R_19065001 RAL-320 1081 chr2R 19185628 19185657 chr2R 19185858 19185867 5 226 7.0 4.0 5.5 0.8 239 chr2R 19185628 intron hppy + chr2R 19185748 intron hppy + chr2R 19185867 intron hppy + chr2R_5_19185001 chr2R_19185001 RAL-320 1082 chr2R 19234829 19234864 chr2R 19234926 19234966 9 99 3.0 6.5 4.8 1.6 137 chr2R 19234829 intron cora + chr2R 19234898 intron cora + chr2R 19234966 intron cora + chr2R_9_19230001 chr2R_19230001 RAL-320 1083 chr2R 19300942 19300993 chr2R 19301044 19301096 27 101 2.0 2.0 2.0 9.0 154 chr2R 19300942 intron Tab2 + chr2R 19301019 intron Tab2 + chr2R 19301096 intron Tab2 + chr2R_27_19300001 chr2R_19300001 RAL-320 1084 chr2R 19533243 19533289 chr2R 19533339 19533383 15 96 2.5 5.0 3.8 3.1 140 chr2R 19533243 intron sm - chr2R 19533313 intron sm - chr2R 19533383 intron sm - chr2R_15_19530001 chr2R_19530001 RAL-320 1085 chr2R 19534854 19534876 chr2R 19534918 19534972 8 88 2.5 3.0 2.8 2.1 118 chr2R 19534854 intron sm - chr2R 19534913 intron sm - chr2R 19534972 intron sm - chr2R_8_19530001 chr2R_19530001 RAL-320 1086 chr2R 19588759 19588782 chr2R 19588831 19588880 9 92 2.0 1.0 1.5 3.6 121 chr2R 19588759 intron sm - chr2R 19588820 intron sm - chr2R 19588880 intron sm - chr2R_9_19585001 chr2R_19585001 RAL-320 1087 chr2R 19603950 19604009 chr2R 19604059 19604113 12 99 0.0 3.0 1.5 4.8 163 chr2R 19603950 intron sm - chr2R 19604032 intron sm - chr2R 19604113 intron sm - chr2R_12_19600001 chr2R_19600001 RAL-320 1088 chr2R 19618106 19618129 chr2R 19618207 19618217 4 98 8.0 4.5 6.2 0.6 111 chr2R 19618106 intron sm - chr2R 19618162 intron sm - chr2R 19618217 intron sm - chr2R_4_19615001 chr2R_19615001 RAL-320 1089 chr2R 19773993 19774039 chr2R 19774126 19774164 13 127 4.0 3.5 3.8 2.7 171 chr2R 19773993 intergenic not near genes chr2R 19774078 intergenic not near genes chr2R 19774164 intergenic not near genes chr2R_13_19770001 chr2R_19770001 RAL-320 1090 chr2R 19776584 19776594 chr2R 19779917 19779933 jockey 8 3339 12.5 9.0 10.8 0.7 3349 chr2R 19776584 intergenic not near genes chr2R 19778258 intergenic not near genes chr2R 19779933 intergenic not near genes chr2R_8_19775001 chr2R_19775001 RAL-320 1091 chr2R 19776595 19776624 chr2R 19779915 19779962 jockey 14 3337 6.5 9.0 7.8 1.6 3367 chr2R 19776595 intergenic not near genes chr2R 19778278 intergenic not near genes chr2R 19779962 intergenic not near genes chr2R_14_19775001 chr2R_19775001 RAL-320 1092 chr2R 19810140 19810188 chr2R 19810247 19810277 18 93 4.5 3.0 3.8 3.8 137 chr2R 19810140 intergenic not near genes chr2R 19810208 intergenic not near genes chr2R 19810277 intergenic not near genes chr2R_18_19810001 chr2R_19810001 RAL-320 1093 chr2R 19914828 19914872 chr2R 19922260 19922304 mdg1 12 7431 6.0 3.5 4.8 2.1 7476 chr2R 19914828 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922304 intergenic not near genes chr2R_12_19915001 chr2R_19915001 RAL-320 1094 chr2R 19943278 19943288 chr2R 19943383 19943393 5 105 1.0 3.0 2.0 1.7 115 chr2R 19943278 intergenic not near genes chr2R 19943336 intergenic not near genes chr2R 19943393 intergenic not near genes chr2R_5_19940001 chr2R_19940001 RAL-320 1095 chr2R 19957442 19957460 chr2R 19962635 19962644 copia 4 5199 4.0 3.5 3.8 0.8 5202 chr2R 19957442 intergenic CG44623 + chr2R 19960043 intergenic not near genes chr2R 19962644 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-320 1096 chr2R 19969794 19969834 chr2R 19969896 19969904 13 89 5.0 5.5 5.2 2.1 110 chr2R 19969794 intergenic not near genes chr2R 19969849 intergenic not near genes chr2R 19969904 intergenic not near genes chr2R_13_19965001 chr2R_19965001 RAL-320 1097 chr2R 20008161 20008212 chr2R 20008270 20008321 14 105 3.0 4.0 3.5 3.1 160 chr2R 20008161 intergenic not near genes chr2R 20008241 intergenic not near genes chr2R 20008321 intergenic not near genes chr2R_14_20005001 chr2R_20005001 RAL-320 1098 chr2R 20008901 20008920 chr2R 20008997 20009010 6 96 4.0 10.0 7.0 0.8 109 chr2R 20008901 intergenic not near genes chr2R 20008956 intergenic not near genes chr2R 20009010 intergenic not near genes chr2R_6_20005001 chr2R_20005001 RAL-320 1099 chr2R 20069214 20069253 chr2R 20071873 20071911 opus 11 2653 0.5 4.5 2.5 3.1 2697 chr2R 20069214 intergenic not near genes chr2R 20070562 intergenic not near genes chr2R 20071911 intergenic not near genes chr2R_11_20070001 chr2R_20070001 RAL-320 1100 chr2R 20080603 20080623 chr2R 20080679 20080720 12 91 0.0 8.0 4.0 2.4 117 chr2R 20080603 intergenic not near genes chr2R 20080662 intergenic not near genes chr2R 20080720 intergenic not near genes chr2R_12_20080001 chr2R_20080001 RAL-320 1101 chr2R 20087982 20088024 chr2R 20088109 20088152 7 125 3.0 6.5 4.8 1.2 170 chr2R 20087982 intergenic not near genes chr2R 20088067 intergenic not near genes chr2R 20088152 intergenic not near genes chr2R_7_20085001 chr2R_20085001 RAL-320 1102 chr2R 20125726 20125748 chr2R 20125817 20125844 11 94 5.0 11.5 8.2 1.2 118 chr2R 20125726 intergenic not near genes chr2R 20125785 intergenic not near genes chr2R 20125844 intergenic not near genes chr2R_11_20125001 chr2R_20125001 RAL-320 1103 chr2R 20223945 20223982 chr2R 20224035 20224087 8 100 5.0 4.5 4.8 1.4 142 chr2R 20223945 intergenic not near genes chr2R 20224016 intergenic not near genes chr2R 20224087 intergenic not near genes chr2R_8_20220001 chr2R_20220001 RAL-320 1104 chr2R 20252014 20252042 chr2R 20252142 20252170 8 127 8.0 3.5 5.8 1.2 156 chr2R 20252014 intron CG9864 - chr2R 20252092 intron CG9864 - chr2R 20252170 intron CG9864 - chr2R_8_20250001 chr2R_20250001 RAL-320 1105 chr2R 20252044 20252064 chr2R 20252141 20252192 8 114 4.5 3.0 3.8 1.7 148 chr2R 20252044 intron CG9864 - chr2R 20252118 intron CG9864 - chr2R 20252192 intron CG9864 - chr2R_8_20250001 chr2R_20250001 RAL-320 1106 chr2R 20510322 20510340 chr2R 20510666 20510684 7 344 11.5 8.5 10.0 0.6 362 chr2R 20510322 intergenic not near genes chr2R 20510503 intergenic not near genes chr2R 20510684 intergenic CR44648 + chr2R_7_20510001 chr2R_20510001 RAL-320 1107 chr2R 20510344 20510363 chr2R 20510665 20510707 8 334 6.0 8.5 7.2 1.0 363 chr2R 20510344 intergenic not near genes chr2R 20510526 intergenic not near genes chr2R 20510707 intergenic CR44648 + chr2R_8_20510001 chr2R_20510001 RAL-320 1108 chr2R 20541969 20542017 chr2R 20542067 20542114 17 98 3.0 5.0 4.0 3.4 145 chr2R 20541969 intergenic not near genes chr2R 20542042 intergenic not near genes chr2R 20542114 intergenic not near genes chr2R_17_20540001 chr2R_20540001 RAL-320 1109 chr2R 20555342 20555347 chr2R 20555420 20555457 4 100 0.0 0.0 0.0 4.0 115 chr2R 20555342 intergenic not near genes chr2R 20555400 intergenic not near genes chr2R 20555457 intergenic not near genes chr2R_4_20555001 chr2R_20555001 RAL-320 1110 chr2R 20572569 20572586 chr2R 20572664 20572696 8 108 8.5 3.5 6.0 1.1 127 chr2R 20572569 intron qsm - chr2R 20572632 intron qsm - chr2R 20572696 intron qsm - chr2R_8_20570001 chr2R_20570001 RAL-320 1111 chr2R 20739434 20739475 chr2R 20744217 20744263 F-element 8 4783 3.5 6.0 4.8 1.4 4829 chr2R 20739434 intron dpr + chr2R 20741848 intron dpr + chr2R 20744263 intron dpr + chr2R_8_20740001 chr2R_20740001 RAL-320 1112 chr2R 20776553 20776558 chr2R 20776650 20776655 5 97 5.0 0.0 2.5 1.4 102 chr2R 20776553 intergenic CG43709 -,CG43710 - chr2R 20776604 intergenic CG43710 -,CG43709 - chr2R 20776655 intergenic CG43710 -,CG43709 - chr2R_5_20775001 chr2R_20775001 RAL-320 1113 chr2R 20783294 20783331 chr2R 20788086 20788115 F-element 10 4787 5.0 9.0 7.0 1.2 4821 chr2R 20783294 intergenic not near genes chr2R 20785704 intergenic not near genes chr2R 20788115 intergenic CG43666 - chr2R_10_20785001 chr2R_20785001 RAL-320 1114 chr2R 20962897 20962937 chr2R 20963015 20963055 9 114 2.5 3.0 2.8 2.4 158 chr2R 20962897 intergenic not near genes chr2R 20962976 intergenic not near genes chr2R 20963055 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RAL-320 1115 chr2R 20967011 20967046 chr2R 20967108 20967143 9 93 5.0 0.0 2.5 2.6 132 chr2R 20967011 intergenic not near genes chr2R 20967077 intergenic not near genes chr2R 20967143 intergenic not near genes chr2R_9_20965001 chr2R_20965001 RAL-320 1116 chr2R 21027637 21027672 chr2R 21027752 21027771 5 109 4.0 3.5 3.8 1.0 134 chr2R 21027637 intergenic not near genes chr2R 21027704 intergenic not near genes chr2R 21027771 intergenic not near genes chr2R_5_21025001 chr2R_21025001 RAL-320 1117 chr2R 21103524 21103553 chr2R 21103624 21103652 10 100 6.5 0.0 3.2 2.4 128 chr2R 21103524 intron ktub + chr2R 21103588 intron ktub + chr2R 21103652 intron ktub + chr2R_10_21100001 chr2R_21100001 RAL-320 1118 chr2R 21136879 21136909 chr2R 21136983 21137013 14 103 5.0 3.0 4.0 2.8 134 chr2R 21136879 intron Magi - chr2R 21136946 intron Magi - chr2R 21137013 intron Magi - chr2R_14_21135001 chr2R_21135001 RAL-320 1119 chr2R 21151097 21151146 chr2R 21153750 21153799 opus 23 2651 6.0 7.0 6.5 3.1 2702 chr2R 21151097 intron CG30389 - chr2R 21152448 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_23_21150001 chr2R_21150001 RAL-320 1120 chr2R 21188203 21188250 chr2R 21188299 21188351 16 97 3.5 5.5 4.5 2.9 148 chr2R 21188203 exon tud + chr2R 21188277 intron tud + chr2R 21188351 intron tud + chr2R_16_21185001 chr2R_21185001 RAL-320 1121 chr2R 21251817 21251850 chr2R 21252064 21252071 7 241 3.5 8.0 5.8 1.0 254 chr2R 21251817 intergenic not near genes chr2R 21251944 intergenic not near genes chr2R 21252071 intergenic not near genes chr2R_7_21250001 chr2R_21250001 RAL-320 1122 chr2R 21257364 21257398 chr2R 21257738 21257786 10 385 2.0 1.5 1.8 3.6 422 chr2R 21257364 intron Rgk3 + chr2R 21257575 intron Rgk3 + chr2R 21257786 intron Rgk3 + chr2R_10_21255001 chr2R_21255001 RAL-320 1123 chr2R 21344427 21344466 chr2R 21344528 21344572 19 100 3.5 4.0 3.8 4.0 145 chr2R 21344427 exon CG15666 + chr2R 21344500 intron CG15666 + chr2R 21344572 intron CG15666 + chr2R_19_21340001 chr2R_21340001 RAL-320 1124 chr2R 21417262 21417274 chr2R 21417383 21417385 6 119 5.0 0.0 2.5 1.7 123 chr2R 21417262 intron Sdc - chr2R 21417324 intron Sdc - chr2R 21417385 intron Sdc - chr2R_6_21415001 chr2R_21415001 RAL-320 1125 chr2R 21472299 21472335 chr2R 21472396 21472433 6 92 2.0 5.0 3.5 1.3 134 chr2R 21472299 intron Sdc - chr2R 21472366 intron Sdc - chr2R 21472433 intron Sdc - chr2R_6_21470001 chr2R_21470001 RAL-320 1126 chr2R 21486669 21486704 chr2R 21486786 21486820 10 112 6.0 7.5 6.8 1.3 151 chr2R 21486669 exon Sara + chr2R 21486744 3` UTR Sara + chr2R 21486820 3` UTR Sara + chr2R_10_21485001 chr2R_21485001 RAL-320 1127 chr2R 21505748 21505796 chr2R 21505849 21505897 15 96 3.0 6.0 4.5 2.7 149 chr2R 21505748 intron MESK2 + chr2R 21505822 intron MESK2 + chr2R 21505897 intron MESK2 + chr2R_15_21505001 chr2R_21505001 RAL-320 1128 chr2R 21540670 21540697 chr2R 21540906 21540935 4 238 2.0 2.0 2.0 1.3 265 chr2R 21540670 intron Egfr + chr2R 21540802 intron Egfr + chr2R 21540935 intron Egfr + chr2R_4_21540001 chr2R_21540001 RAL-320 1129 chr2R 21578741 21578751 chr2R 21578846 21578856 5 105 1.0 11.5 6.2 0.7 115 chr2R 21578741 intergenic not near genes chr2R 21578798 intergenic not near genes chr2R 21578856 intergenic not near genes chr2R_5_21575001 chr2R_21575001 RAL-320 1130 chr2R 21585209 21585247 chr2R 21585308 21585331 14 96 3.0 6.0 4.5 2.5 122 chr2R 21585209 3` UTR CG30222 + chr2R 21585270 3` UTR CG30222 + chr2R 21585331 3` UTR CG30222 + chr2R_14_21585001 chr2R_21585001 RAL-320 1131 chr2R 21699894 21699943 chr2R 21700002 21700051 15 106 3.5 4.5 4.0 3.0 157 chr2R 21699894 intron HmgZ - chr2R 21699972 intron HmgZ - chr2R 21700051 intron HmgZ - chr2R_15_21695001 chr2R_21695001 RAL-320 1132 chr2R 21710924 21710945 chr2R 21711041 21711062 6 114 6.0 5.0 5.5 0.9 138 chr2R 21710924 intron,intron HmgD +,CG30403 - chr2R 21710993 intron,intron HmgD +,CG30403 - chr2R 21711062 intron,intron HmgD +,CG30403 - chr2R_6_21710001 chr2R_21710001 RAL-320 1133 chr2R 21710947 21710966 chr2R 21711038 21711077 8 113 2.5 4.5 3.5 1.8 130 chr2R 21710947 intron,intron HmgD +,CG30403 - chr2R 21711012 intron,intron HmgD +,CG30403 - chr2R 21711077 intron,intron HmgD +,CG30403 - chr2R_8_21710001 chr2R_21710001 RAL-320 1134 chr2R 21721556 21721610 chr2R 21721664 21721717 9 99 1.5 0.0 0.8 5.0 161 chr2R 21721556 intron LBR + chr2R 21721636 intron LBR + chr2R 21721717 intron LBR + chr2R_9_21720001 chr2R_21720001 RAL-320 1135 chr2R 21726682 21726687 chr2R 21726800 21726805 6 118 9.0 0.0 4.5 1.1 123 chr2R 21726682 intergenic not near genes chr2R 21726744 intergenic not near genes chr2R 21726805 intergenic not near genes chr2R_6_21725001 chr2R_21725001 RAL-320 1136 chr2R 21738276 21738309 chr2R 21747437 21747458 roo 11 9162 2.0 4.5 3.2 2.6 9182 chr2R 21738276 intergenic not near genes chr2R 21742867 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_11_21740001 chr2R_21740001 RAL-320 1137 chr2R 21753070 21753111 chr2R 21753567 21753616 roo 18 498 6.5 4.5 5.5 2.8 546 chr2R 21753070 intergenic not near genes chr2R 21753343 intergenic not near genes chr2R 21753616 intergenic not near genes chr2R_18_21750001 chr2R_21750001 RAL-320 1138 chr2R 21760271 21760313 chr2R 21760368 21760415 13 96 4.0 5.0 4.5 2.4 144 chr2R 21760271 intergenic not near genes chr2R 21760343 intergenic not near genes chr2R 21760415 intergenic not near genes chr2R_13_21760001 chr2R_21760001 RAL-320 1139 chr2R 21783567 21783573 chr2R 21783664 21783670 5 97 3.5 2.5 3.0 1.2 103 chr2R 21783567 intergenic not near genes chr2R 21783618 intergenic not near genes chr2R 21783670 intergenic not near genes chr2R_5_21780001 chr2R_21780001 RAL-320 1140 chr2R 21797854 21797887 chr2R 21797950 21797973 8 93 10.5 0.0 5.2 1.3 119 chr2R 21797854 intergenic CG18735 - chr2R 21797914 intergenic CG18735 - chr2R 21797973 intergenic CG18735 - chr2R_8_21795001 chr2R_21795001 RAL-320 1141 chr2R 21809507 21809555 chr2R 21817767 21817779 roo 12 8257 6.5 8.5 7.5 1.4 8272 chr2R 21809507 intergenic not near genes chr2R 21813643 intergenic not near genes chr2R 21817779 intergenic not near genes chr2R_12_21810001 chr2R_21810001 RAL-320 1142 chr2R 21833501 21833550 chr2R 21833600 21833649 20 99 3.0 4.5 3.8 4.2 148 chr2R 21833501 exon CG34040 - chr2R 21833575 intergenic CG34040 - chr2R 21833649 intergenic CG34040 - chr2R_20_21830001 chr2R_21830001 RAL-320 1143 chr2R 21840897 21840927 chr2R 21840999 21841029 6 100 5.0 8.0 6.5 0.8 132 chr2R 21840897 intergenic not near genes chr2R 21840963 intergenic not near genes chr2R 21841029 intergenic not near genes chr2R_6_21840001 chr2R_21840001 RAL-320 1144 chr2R 21888299 21888313 chr2R 21888402 21888424 6 110 3.5 5.5 4.5 1.1 125 chr2R 21888299 intron Fili + chr2R 21888362 intron Fili + chr2R 21888424 intron Fili + chr2R_6_21885001 chr2R_21885001 RAL-320 1145 chr2R 21906250 21906295 chr2R 21906371 21906416 23 121 4.5 1.5 3.0 5.8 166 chr2R 21906250 intron Fili + chr2R 21906333 intron Fili + chr2R 21906416 intron Fili + chr2R_23_21905001 chr2R_21905001 RAL-320 1146 chr2R 21919897 21919905 chr2R 21919965 21919997 5 83 2.5 7.5 5.0 0.8 100 chr2R 21919897 intron Fili + chr2R 21919947 intron Fili + chr2R 21919997 intron Fili + chr2R_5_21915001 chr2R_21915001 RAL-320 1147 chr2R 21922606 21922625 chr2R 21922681 21922722 5 91 6.0 7.0 6.5 0.7 116 chr2R 21922606 intron Fili + chr2R 21922664 intron Fili + chr2R 21922722 intron Fili + chr2R_5_21920001 chr2R_21920001 RAL-320 1148 chr2R 21946747 21946804 chr2R 21946863 21946920 23 115 6.0 5.0 5.5 3.5 173 chr2R 21946747 intergenic Fili + chr2R 21946834 intergenic not near genes chr2R 21946920 intergenic not near genes chr2R_23_21945001 chr2R_21945001 RAL-320 1149 chr2R 22004281 22004316 chr2R 22004390 22004430 9 111 4.5 0.5 2.5 2.6 149 chr2R 22004281 intron CG34370 - chr2R 22004356 intron CG34370 - chr2R 22004430 intron CG34370 - chr2R_9_22000001 chr2R_22000001 RAL-320 1150 chr2R 22009755 22009808 chr2R 22009851 22009903 23 93 4.5 8.0 6.2 3.2 148 chr2R 22009755 intron CG34370 - chr2R 22009829 intron CG34370 - chr2R 22009903 intron CG34370 - chr2R_23_22005001 chr2R_22005001 RAL-320 1151 chr2R 22029464 22029505 chr2R 22029621 22029663 15 156 4.0 4.5 4.2 2.9 199 chr2R 22029464 intron CG34370 - chr2R 22029564 intron CG34370 - chr2R 22029663 intron CG34370 - chr2R_15_22025001 chr2R_22025001 RAL-320 1152 chr2R 22035523 22035562 chr2R 22035630 22035654 14 104 4.0 3.0 3.5 3.1 131 chr2R 22035523 intron,exon CG34370 -,CG9308 + chr2R 22035588 intron,3` UTR CG34370 -,CG9308 + chr2R 22035654 intron,3` UTR CG34370 -,CG9308 + chr2R_14_22035001 chr2R_22035001 RAL-320 1153 chr2R 22054257 22054269 chr2R 22054502 22054502 4 242 0.0 0.5 0.2 3.3 245 chr2R 22054257 intergenic not near genes chr2R 22054380 intergenic not near genes chr2R 22054502 intergenic not near genes chr2R_4_22050001 chr2R_22050001 RAL-320 1154 chr2R 22099864 22099868 chr2R 22099965 22099969 4 101 4.5 4.0 4.2 0.8 105 chr2R 22099864 intergenic CG11073 - chr2R 22099916 intergenic CG11073 - chr2R 22099969 intergenic CG11073 - chr2R_4_22095001 chr2R_22095001 RAL-320 1155 chr2R 22099871 22099883 chr2R 22099961 22099984 7 98 3.0 4.0 3.5 1.6 113 chr2R 22099871 intergenic CG11073 - chr2R 22099928 intergenic CG11073 - chr2R 22099984 intergenic CG11073 - chr2R_7_22095001 chr2R_22095001 RAL-320 1156 chr2R 22135442 22135466 chr2R 22135544 22135553 5 105 4.0 3.0 3.5 1.1 111 chr2R 22135442 intergenic not near genes chr2R 22135498 intergenic not near genes chr2R 22135553 intergenic not near genes chr2R_5_22135001 chr2R_22135001 RAL-320 1157 chr2R 22161697 22161746 chr2R 22161858 22161907 13 155 3.0 2.0 2.5 3.7 210 chr2R 22161697 intron a + chr2R 22161802 intron a + chr2R 22161907 intron a + chr2R_13_22160001 chr2R_22160001 RAL-320 1158 chr2R 22185668 22185675 chr2R 22185787 22185794 5 119 4.0 2.0 3.0 1.2 126 chr2R 22185668 3` UTR MED16 + chr2R 22185731 3` UTR MED16 + chr2R 22185794 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-320 1159 chr2R 22185679 22185696 chr2R 22185778 22185806 6 111 2.5 2.0 2.2 1.9 127 chr2R 22185679 3` UTR MED16 + chr2R 22185742 3` UTR MED16 + chr2R 22185806 3` UTR MED16 + chr2R_6_22185001 chr2R_22185001 RAL-320 1160 chr2R 22216917 22216950 chr2R 22216999 22217047 6 91 3.0 7.5 5.2 1.0 130 chr2R 22216917 3` UTR ari-2 + chr2R 22216982 3` UTR ari-2 + chr2R 22217047 3` UTR ari-2 + chr2R_6_22215001 chr2R_22215001 RAL-320 1161 chr2R 22349683 22349724 chr2R 22351482 22351501 jockey 14 1800 8.5 7.0 7.8 1.6 1818 chr2R 22349683 intron Liprin-gamma - chr2R 22350592 intron Liprin-gamma - chr2R 22351501 intron Liprin-gamma - chr2R_14_22350001 chr2R_22350001 RAL-320 1162 chr2R 22360185 22360210 chr2R 22360287 22360293 8 101 5.0 7.0 6.0 1.1 108 chr2R 22360185 intron Liprin-gamma - chr2R 22360239 intron Liprin-gamma - chr2R 22360293 intron Liprin-gamma - chr2R_8_22360001 chr2R_22360001 RAL-320 1163 chr2R 22374619 22374636 chr2R 22374725 22374743 4 105 5.0 3.0 4.0 0.8 124 chr2R 22374619 3` UTR CR44759 - chr2R 22374681 3` UTR CR44759 - chr2R 22374743 3` UTR CR44759 - chr2R_4_22370001 chr2R_22370001 RAL-320 1164 chr2R 22453201 22453217 chr2R 22453324 22453340 4 123 0.0 5.5 2.8 1.1 139 chr2R 22453201 intergenic not near genes chr2R 22453270 intergenic not near genes chr2R 22453340 intergenic not near genes chr2R_4_22450001 chr2R_22450001 RAL-320 1165 chr2R 22460360 22460406 chr2R 22460459 22460505 11 98 5.5 3.0 4.2 2.1 145 chr2R 22460360 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460505 intron CG10384 + chr2R_11_22460001 chr2R_22460001 RAL-320 1166 chr2R 22499862 22499883 chr2R 22499952 22499970 6 92 0.0 10.5 5.2 1.0 108 chr2R 22499862 intron px - chr2R 22499916 intron px - chr2R 22499970 intron px - chr2R_6_22495001 chr2R_22495001 RAL-320 1167 chr2R 22503782 22503864 chr2R 22503898 22503979 8 115 3.0 4.0 3.5 1.8 197 chr2R 22503782 intron px - chr2R 22503880 intron px - chr2R 22503979 intron px - chr2R_8_22500001 chr2R_22500001 RAL-320 1168 chr2R 22525785 22525786 chr2R 22529300 22529301 jockey 4 3524 1.5 3.5 2.5 1.1 3516 chr2R 22525785 intron px - chr2R 22527543 intron px - chr2R 22529301 intron px - chr2R_4_22525001 chr2R_22525001 RAL-320 1169 chr2R 22574172 22574186 chr2R 22574255 22574286 6 93 4.5 7.5 6.0 0.9 114 chr2R 22574172 intron dnr1 - chr2R 22574229 intron dnr1 - chr2R 22574286 intron dnr1 - chr2R_6_22570001 chr2R_22570001 RAL-320 1170 chr2R 22575288 22575311 chr2R 22575384 22575388 4 90 0.0 4.5 2.2 1.2 100 chr2R 22575288 intron dnr1 - chr2R 22575338 intron dnr1 - chr2R 22575388 intron dnr1 - chr2R_4_22575001 chr2R_22575001 RAL-320 1171 chr2R 22620809 22620858 chr2R 22620929 22620963 14 109 2.0 7.0 4.5 2.5 154 chr2R 22620809 5` UTR CG33143 + chr2R 22620886 5` UTR CG33143 + chr2R 22620963 5` UTR CG33143 + chr2R_14_22620001 chr2R_22620001 RAL-320 1172 chr2R 22623432 22623481 chr2R 22623592 22623641 18 154 7.0 5.5 6.2 2.5 209 chr2R 22623432 intron CG33143 + chr2R 22623536 intron CG33143 + chr2R 22623641 intron CG33143 + chr2R_18_22620001 chr2R_22620001 RAL-320 1173 chr2R 22663115 22663165 chr2R 22663215 22663265 14 95 3.5 4.0 3.8 2.9 150 chr2R 22663115 3` UTR CG42566 + chr2R 22663190 3` UTR CG42566 + chr2R 22663265 intergenic CG42566 +,CG4250 + chr2R_14_22660001 chr2R_22660001 RAL-320 1174 chr2R 22756552 22756582 chr2R 22756631 22756679 18 93 5.0 6.5 5.8 2.6 127 chr2R 22756552 intron,intron CG42260 -,CR30267 + chr2R 22756616 intron,intron CG42260 -,CR30267 + chr2R 22756679 intron,intron CG42260 -,CR30267 + chr2R_18_22755001 chr2R_22755001 RAL-320 1175 chr2R 22774943 22774965 chr2R 22775382 22775404 jockey 4 434 13.0 5.5 9.2 0.4 461 chr2R 22774943 intron CG42260 - chr2R 22775174 intron CG42260 - chr2R 22775404 intron CG42260 - chr2R_4_22775001 chr2R_22775001 RAL-320 1176 chr2R 22774966 22774995 chr2R 22775378 22775434 jockey 17 429 8.0 3.5 5.8 2.5 468 chr2R 22774966 intron CG42260 - chr2R 22775200 intron CG42260 - chr2R 22775434 intron CG42260 - chr2R_17_22775001 chr2R_22775001 RAL-320 1177 chr2R 22780631 22780647 chr2R 22780757 22780770 7 126 13.5 7.0 10.2 0.6 139 chr2R 22780631 intron CG42260 - chr2R 22780700 intron CG42260 - chr2R 22780770 intron CG42260 - chr2R_7_22780001 chr2R_22780001 RAL-320 1178 chr2R 22780649 22780676 chr2R 22780755 22780781 10 116 6.5 6.5 6.5 1.3 132 chr2R 22780649 intron CG42260 - chr2R 22780715 intron CG42260 - chr2R 22780781 intron CG42260 - chr2R_10_22780001 chr2R_22780001 RAL-320 1179 chr2R 22835369 22835388 chr2R 22835444 22835477 4 82 6.0 1.0 3.5 0.9 108 chr2R 22835369 exon CG12490 + chr2R 22835423 exon CG12490 + chr2R 22835477 exon CG12490 + chr2R_4_22835001 chr2R_22835001 RAL-320 1180 chr2R 22843020 22843052 chr2R 22844990 22845004 flea 10 1977 6.5 7.5 7.0 1.2 1984 chr2R 22843020 intergenic CG9826 + chr2R 22844012 intergenic not near genes chr2R 22845004 intergenic not near genes chr2R_10_22840001 chr2R_22840001 RAL-320 1181 chr2R 22873620 22873663 chr2R 22873711 22873757 7 95 3.5 1.0 2.2 2.2 137 chr2R 22873620 exon CG13532 + chr2R 22873688 intron CG13532 + chr2R 22873757 intron CG13532 + chr2R_7_22870001 chr2R_22870001 RAL-320 1182 chr2R 22907417 22907433 chr2R 22907493 22907501 6 81 5.0 3.5 4.2 1.2 84 chr2R 22907417 intron nahoda + chr2R 22907459 intron nahoda + chr2R 22907501 intron nahoda + chr2R_6_22905001 chr2R_22905001 RAL-320 1183 chr2R 23029594 23029612 chr2R 23029691 23029709 6 97 11.0 6.0 8.5 0.6 115 chr2R 23029594 intron,intron twi +,CG42741 - chr2R 23029652 intron,intron twi +,CG42741 - chr2R 23029709 intron,intron twi +,CG42741 - chr2R_6_23025001 chr2R_23025001 RAL-320 1184 chr2R 23052629 23052682 chr2R 23052725 23052778 16 94 6.0 6.0 6.0 2.3 149 chr2R 23052629 intergenic not near genes chr2R 23052704 intergenic not near genes chr2R 23052778 intergenic not near genes chr2R_16_23050001 chr2R_23050001 RAL-320 1185 chr2R 23053978 23054024 chr2R 23054076 23054122 14 94 3.5 1.5 2.5 4.0 144 chr2R 23053978 intergenic not near genes chr2R 23054050 intergenic not near genes chr2R 23054122 intergenic not near genes chr2R_14_23050001 chr2R_23050001 RAL-320 1186 chr2R 23061779 23061790 chr2R 23061868 23061904 6 102 4.0 6.5 5.2 1.0 125 chr2R 23061779 3` UTR l(2)06496 - chr2R 23061842 3` UTR l(2)06496 - chr2R 23061904 3` UTR l(2)06496 - chr2R_6_23060001 chr2R_23060001 RAL-320 1187 chr2R 23070409 23070444 chr2R 23070510 23070538 21 111 1.5 5.0 3.2 5.0 129 chr2R 23070409 intron l(2)k09913 + chr2R 23070474 intron l(2)k09913 + chr2R 23070538 intron l(2)k09913 + chr2R_21_23070001 chr2R_23070001 RAL-320 1188 chr2R 23119580 23119627 chr2R 23119677 23119724 16 95 7.0 7.0 7.0 2.0 144 chr2R 23119580 intergenic not near genes chr2R 23119652 intergenic not near genes chr2R 23119724 intergenic not near genes chr2R_16_23115001 chr2R_23115001 RAL-320 1189 chr2R 23122888 23122940 chr2R 23122988 23123042 9 100 4.5 2.0 3.2 2.1 154 chr2R 23122888 intergenic not near genes chr2R 23122965 intergenic not near genes chr2R 23123042 intergenic not near genes chr2R_9_23120001 chr2R_23120001 RAL-320 1190 chr2R 23158332 23158349 chr2R 23158426 23158446 9 94 7.5 9.0 8.2 1.0 114 chr2R 23158332 intron CG9899 + chr2R 23158389 intron CG9899 + chr2R 23158446 intron CG9899 + chr2R_9_23155001 chr2R_23155001 RAL-320 1191 chr2R 23158350 23158355 chr2R 23158425 23158452 6 86 7.5 9.0 8.2 0.7 102 chr2R 23158350 intron CG9899 + chr2R 23158401 intron CG9899 + chr2R 23158452 intron CG9899 + chr2R_6_23155001 chr2R_23155001 RAL-320 1192 chr2R 23175042 23175058 chr2R 23175115 23175139 8 82 3.0 7.5 5.2 1.3 97 chr2R 23175042 intron CG34371 - chr2R 23175090 intron CG34371 - chr2R 23175139 intron CG34371 - chr2R_8_23175001 chr2R_23175001 RAL-320 1193 chr2R 23186073 23186116 chr2R 23186238 23186281 7 161 3.5 3.5 3.5 1.6 208 chr2R 23186073 intron CG34371 - chr2R 23186177 intron CG34371 - chr2R 23186281 intron CG34371 - chr2R_7_23185001 chr2R_23185001 RAL-320 1194 chr2R 23190012 23190017 chr2R 23190101 23190102 5 93 10.5 0.5 5.5 0.8 90 chr2R 23190012 intron CG34371 - chr2R 23190057 intron CG34371 - chr2R 23190102 intron CG34371 - chr2R_5_23190001 chr2R_23190001 RAL-320 1195 chr2R 23219000 23219013 chr2R 23219259 23219263 4 257 6.0 0.5 3.2 1.0 263 chr2R 23219000 intergenic not near genes chr2R 23219132 intergenic not near genes chr2R 23219263 intergenic not near genes chr2R_4_23215001 chr2R_23215001 RAL-320 1196 chr2R 23236796 23236843 chr2R 23236914 23236930 4 109 0.0 0.0 0.0 4.0 134 chr2R 23236796 intergenic not near genes chr2R 23236863 intergenic not near genes chr2R 23236930 intergenic not near genes chr2R_4_23235001 chr2R_23235001 RAL-320 1197 chr2R 23283346 23283384 chr2R 23283443 23283473 8 81 1.0 3.0 2.0 2.7 127 chr2R 23283346 exon CG3124 - chr2R 23283410 exon CG3124 - chr2R 23283473 exon CG3124 - chr2R_8_23280001 chr2R_23280001 RAL-320 1198 chr2R 23421343 23421385 chr2R 23421450 23421495 7 106 3.5 4.5 4.0 1.4 152 chr2R 23421343 intergenic CG9815 - chr2R 23421419 intergenic CG9815 - chr2R 23421495 intergenic CG9815 - chr2R_7_23420001 chr2R_23420001 RAL-320 1199 chr2R 23463368 23463418 chr2R 23463467 23463512 12 95 6.5 1.5 4.0 2.4 144 chr2R 23463368 intron CG43795 + chr2R 23463440 intron CG43795 + chr2R 23463512 intron CG43795 + chr2R_12_23460001 chr2R_23460001 RAL-320 1200 chr2R 23496723 23496750 chr2R 23497078 23497097 6 348 6.5 4.5 5.5 0.9 374 chr2R 23496723 intergenic not near genes chr2R 23496910 intergenic not near genes chr2R 23497097 intergenic not near genes chr2R_6_23495001 chr2R_23495001 RAL-320 1201 chr2R 23496759 23496768 chr2R 23497076 23497108 6 342 3.0 4.5 3.8 1.2 349 chr2R 23496759 intergenic not near genes chr2R 23496934 intergenic not near genes chr2R 23497108 intergenic not near genes chr2R_6_23495001 chr2R_23495001 RAL-320 1202 chr2R 23553704 23553726 chr2R 23553814 23553836 8 110 9.5 8.0 8.8 0.8 132 chr2R 23553704 intron pita - chr2R 23553770 intron pita - chr2R 23553836 intron pita - chr2R_8_23550001 chr2R_23550001 RAL-320 1203 chr2R 23563872 23563920 chr2R 23563972 23564020 14 96 5.5 5.0 5.2 2.3 148 chr2R 23563872 3` UTR Pi3K59F + chr2R 23563946 3` UTR Pi3K59F + chr2R 23564020 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_14_23560001 chr2R_23560001 RAL-320 1204 chr2R 23589159 23589193 chr2R 23589256 23589290 11 92 2.5 7.0 4.8 1.9 131 chr2R 23589159 intron apt + chr2R 23589224 intron apt + chr2R 23589290 intron apt + chr2R_11_23585001 chr2R_23585001 RAL-320 1205 chr2R 23607024 23607192 chr2R 23607118 23607305 18 104 2.5 5.0 3.8 3.8 281 chr2R 23607024 intron CG17664 - chr2R 23607164 intron CG17664 - chr2R 23607305 intron CG17664 - chr2R_18_23605001 chr2R_23605001 RAL-320 1206 chr2R 23681419 23681428 chr2R 23681518 23681520 6 98 0.0 1.5 0.8 3.3 101 chr2R 23681419 intergenic St1 + chr2R 23681470 intergenic St1 + chr2R 23681520 intergenic St1 + chr2R_6_23680001 chr2R_23680001 RAL-320 1207 chr2R 23744753 23744794 chr2R 23744842 23744893 8 92 4.0 3.5 3.8 1.7 140 chr2R 23744753 intron egl - chr2R 23744823 intron egl - chr2R 23744893 intron egl - chr2R_8_23740001 chr2R_23740001 RAL-320 1208 chr2R 23843529 23843571 chr2R 23843626 23843659 10 92 6.5 5.0 5.8 1.5 130 chr2R 23843529 3` UTR Snap29 - chr2R 23843594 3` UTR Snap29 - chr2R 23843659 3` UTR Snap29 - chr2R_10_23840001 chr2R_23840001 RAL-320 1209 chr2R 23914289 23914331 chr2R 23921933 23921936 412 10 7626 2.5 3.0 2.8 2.6 7647 chr2R 23914289 exon kcc + chr2R 23918112 intron kcc + chr2R 23921936 intron kcc + chr2R_10_23915001 chr2R_23915001 RAL-320 1210 chr2R 24013035 24013081 chr2R 24013135 24013180 13 98 4.0 8.5 6.2 1.8 145 chr2R 24013035 exon Unc-89 - chr2R 24013108 intron Unc-89 - chr2R 24013180 intron Unc-89 - chr2R_13_24010001 chr2R_24010001 RAL-320 1211 chr2R 24031361 24031414 chr2R 24031465 24031469 17 100 4.5 8.0 6.2 2.4 108 chr2R 24031361 5` UTR CG30172 - chr2R 24031415 5` UTR CG30172 - chr2R 24031469 intergenic CG30172 -,Chi - chr2R_17_24030001 chr2R_24030001 RAL-320 1212 chr2R 24177221 24177260 chr2R 24184726 24184765 412 12 7505 10.0 9.5 9.8 1.1 7544 chr2R 24177221 3` UTR Nop60B + chr2R 24180993 intron Nop60B + chr2R 24184765 3` UTR Nop60B + chr2R_12_24180001 chr2R_24180001 RAL-320 1213 chr2R 24291929 24291975 chr2R 24292082 24292128 13 151 4.5 4.5 4.5 2.4 199 chr2R 24291929 intergenic not near genes chr2R 24292028 intergenic not near genes chr2R 24292128 intergenic not near genes chr2R_13_24290001 chr2R_24290001 RAL-320 1214 chr2R 24430796 24430835 chr2R 24430887 24430936 17 97 3.0 2.5 2.8 4.5 140 chr2R 24430796 intergenic CG15873 - chr2R 24430866 intergenic CG15873 -,Pgam5-2 - chr2R 24430936 intergenic CG15873 -,Pgam5-2 - chr2R_17_24430001 chr2R_24430001 RAL-320 1215 chr2R 24513803 24513841 chr2R 24513887 24513938 17 92 1.5 2.5 2.0 5.7 135 chr2R 24513803 intron Letm1 - chr2R 24513870 intron Letm1 - chr2R 24513938 intron Letm1 - chr2R_17_24510001 chr2R_24510001 RAL-320 1216 chr2R 24584324 24584338 chr2R 24584426 24584440 4 102 12.5 4.0 8.2 0.4 116 chr2R 24584324 intron pio + chr2R 24584382 intron pio + chr2R 24584440 intron pio + chr2R_4_24580001 chr2R_24580001 RAL-320 1217 chr2R 24584347 24584366 chr2R 24584424 24584468 7 94 5.0 3.0 4.0 1.4 121 chr2R 24584347 intron pio + chr2R 24584408 intron pio + chr2R 24584468 intron pio + chr2R_7_24580001 chr2R_24580001 RAL-320 1218 chr2R 24633976 24634025 chr2R 24634074 24634101 22 89 4.0 3.0 3.5 4.9 125 chr2R 24633976 intron CG13594 - chr2R 24634038 intron CG13594 - chr2R 24634101 intron CG13594 - chr2R_22_24630001 chr2R_24630001 RAL-320 1219 chr2R 24636883 24636917 chr2R 24636989 24637011 10 103 7.5 0.0 3.8 2.1 128 chr2R 24636883 intron CG13594 - chr2R 24636947 intron CG13594 - chr2R 24637011 intron CG13594 - chr2R_10_24635001 chr2R_24635001 RAL-320 1220 chr2R 24647601 24647617 chr2R 24655147 24655193 412 5 7563 7.5 6.0 6.8 0.6 7592 chr2R 24647601 intergenic not near genes chr2R 24651397 intergenic not near genes chr2R 24655193 intergenic not near genes chr2R_5_24650001 chr2R_24650001 RAL-320 1221 chr2R 24727866 24727916 chr2R 24735393 24735429 mdg1 7 7519 3.0 6.5 4.8 1.2 7563 chr2R 24727866 intron Mid1 - chr2R 24731648 intron Mid1 - chr2R 24735429 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-320 1222 chr2R 24763601 24763641 chr2R 24765586 24765637 G2 11 1984 2.5 3.0 2.8 2.9 2036 chr2R 24763601 exon CG3894 + chr2R 24764619 intron CG3894 + chr2R 24765637 exon CG3894 + chr2R_11_24760001 chr2R_24760001 RAL-320 1223 chr2R 24767986 24768022 chr2R 24768083 24768121 14 101 5.0 3.5 4.2 2.7 135 chr2R 24767986 5` UTR GstE12 - chr2R 24768054 5` UTR GstE12 - chr2R 24768121 5` UTR GstE12 - chr2R_14_24765001 chr2R_24765001 RAL-320 1224 chr2R 24848640 24848686 chr2R 24848742 24848784 10 103 1.0 10.0 5.5 1.5 144 chr2R 24848640 intergenic CG3650 + chr2R 24848712 intergenic CG3650 + chr2R 24848784 intergenic CG3650 + chr2R_10_24845001 chr2R_24845001 RAL-320 1225 chr2R 25061328 25061367 chr2R 25061421 25061470 9 101 7.5 3.5 5.5 1.4 142 chr2R 25061328 intergenic not near genes chr2R 25061399 intergenic not near genes chr2R 25061470 intergenic gsb + chr2R_9_25060001 chr2R_25060001 RAL-320 1226 chr2R 25081715 25081725 chr2R 25081883 25081885 4 166 13.5 5.0 9.2 0.4 170 chr2R 25081715 intron gol - chr2R 25081800 intron gol - chr2R 25081885 intron gol - chr2R_4_25080001 chr2R_25080001 RAL-320 1227 chr2R 25081726 25081768 chr2R 25081882 25081936 15 166 4.5 5.0 4.8 2.6 210 chr2R 25081726 intron gol - chr2R 25081831 intron gol - chr2R 25081936 intron gol - chr2R_15_25080001 chr2R_25080001 RAL-320 1228 chr2R 25101254 25101282 chr2R 25101376 25101404 8 120 8.0 1.5 4.8 1.4 150 chr2R 25101254 intron lov - chr2R 25101329 intron lov - chr2R 25101404 intron lov - chr2R_8_25100001 chr2R_25100001 RAL-320 1229 chr2R 25102505 25102555 chr2R 25102693 25102729 14 186 1.0 6.0 3.5 3.1 224 chr2R 25102505 intron lov - chr2R 25102617 intron lov - chr2R 25102729 intron lov - chr2R_14_25100001 chr2R_25100001 RAL-320 1230 chr2R 25104755 25104806 chr2R 25104900 25104951 15 144 6.0 3.5 4.8 2.6 196 chr2R 25104755 intron lov - chr2R 25104853 intron lov - chr2R 25104951 intron lov - chr2R_15_25100001 chr2R_25100001 RAL-320 1231 chr2R 25131010 25131038 chr2R 25131087 25131097 11 83 3.0 3.0 3.0 2.8 87 chr2R 25131010 intron lov - chr2R 25131054 intron lov - chr2R 25131097 intron lov - chr2R_11_25130001 chr2R_25130001 RAL-320 1232 chr2R 25141635 25141681 chr2R 25159345 25159359 roo 12 17706 3.0 4.5 3.8 2.5 17724 chr2R 25141635 intergenic not near genes chr2R 25150497 intergenic not near genes chr2R 25159359 intergenic not near genes chr2R_12_25150001 chr2R_25150001 RAL-320 1233 chr2R 25171485 25171516 chr2R 25171572 25171613 11 96 2.0 2.0 2.0 3.7 128 chr2R 25171485 intergenic not near genes chr2R 25171549 intergenic not near genes chr2R 25171613 intergenic not near genes chr2R_11_25170001 chr2R_25170001 RAL-320 1234 chr2R 25191709 25191720 chr2R 25191807 25191818 4 98 1.5 4.5 3.0 1.0 109 chr2R 25191709 intron CG9380 - chr2R 25191764 intron CG9380 - chr2R 25191818 intron CG9380 - chr2R_4_25190001 chr2R_25190001 RAL-320 1235 chr2R 25193323 25193370 chr2R 25193484 25193534 14 162 1.0 2.5 1.8 5.0 211 chr2R 25193323 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193534 intron CG9380 - chr2R_14_25190001 chr2R_25190001 RAL-320 1236 chr2R 25243956 25244007 chr2R 25244054 25244085 15 93 6.0 6.5 6.2 2.1 129 chr2R 25243956 intron CG9380 - chr2R 25244020 intron CG9380 - chr2R 25244085 intron CG9380 - chr2R_15_25240001 chr2R_25240001 RAL-320 1237 chr2R 25253432 25253478 chr2R 25253528 25253574 7 96 6.5 9.0 7.8 0.8 142 chr2R 25253432 intron,intron CG9380 -,CG30428 + chr2R 25253503 intron,intron CG9380 -,CG30428 + chr2R 25253574 intron,intron CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 RAL-320 1238 chr3L 52894 52935 chr3L 52994 53039 10 100 2.5 6.5 4.5 1.8 145 chr3L 52894 intergenic not near genes chr3L 52966 intergenic not near genes chr3L 53039 intergenic not near genes chr3L_10_50001 chr3L_50001 RAL-320 1239 chr3L 68972 69014 chr3L 69074 69121 8 106 4.5 6.5 5.5 1.2 149 chr3L 68972 3` UTR Lsp1gamma + chr3L 69046 intergenic Lsp1gamma +,CR44510 + chr3L 69121 intergenic CR44510 +,Lsp1gamma + chr3L_8_65001 chr3L_65001 RAL-320 1240 chr3L 86800 86812 chr3L 88735 88746 4 1932 33.0 18.5 25.8 0.1 1946 chr3L 86800 intergenic not near genes chr3L 87773 intergenic not near genes chr3L 88746 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-320 1241 chr3L 110192 110238 chr3L 119379 119425 roo 14 9182 6.0 5.0 5.5 2.2 9233 chr3L 110192 intergenic not near genes chr3L 114808 intergenic not near genes chr3L 119425 intergenic not near genes chr3L_14_110001 chr3L_110001 RAL-320 1242 chr3L 365504 365551 chr3L 365610 365657 28 104 4.5 5.5 5.0 4.7 153 chr3L 365504 3` UTR CG1233 + chr3L 365580 3` UTR CG1233 + chr3L 365657 3` UTR CG1233 + chr3L_28_365001 chr3L_365001 RAL-320 1243 chr3L 376102 376154 chr3L 376201 376253 22 97 3.5 4.0 3.8 4.6 151 chr3L 376102 intron trh - chr3L 376178 intron trh - chr3L 376253 intron trh - chr3L_22_375001 chr3L_375001 RAL-320 1244 chr3L 402683 402691 chr3L 409741 409764 297 6 7065 12.0 6.0 9.0 0.6 7081 chr3L 402683 intergenic not near genes chr3L 406224 intergenic not near genes chr3L 409764 intergenic not near genes chr3L_6_405001 chr3L_405001 RAL-320 1245 chr3L 402698 402717 chr3L 409740 409790 297 12 7054 4.0 6.0 5.0 2.0 7092 chr3L 402698 intergenic not near genes chr3L 406244 intergenic not near genes chr3L 409790 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-320 1246 chr3L 415969 416154 chr3L 416070 416241 15 103 10.0 10.5 10.2 1.3 272 chr3L 415969 intergenic not near genes chr3L 416105 intergenic not near genes chr3L 416241 intergenic not near genes chr3L_15_415001 chr3L_415001 RAL-320 1247 chr3L 437128 437155 chr3L 437254 437298 8 138 5.5 5.0 5.2 1.3 170 chr3L 437128 intron klar - chr3L 437213 intron klar - chr3L 437298 intron klar - chr3L_8_435001 chr3L_435001 RAL-320 1248 chr3L 438845 438875 chr3L 438931 438949 17 92 6.0 3.5 4.8 2.9 104 chr3L 438845 intron klar - chr3L 438897 intron klar - chr3L 438949 intron klar - chr3L_17_435001 chr3L_435001 RAL-320 1249 chr3L 445559 445578 chr3L 445650 445653 6 88 2.0 4.0 3.0 1.5 94 chr3L 445559 exon klar - chr3L 445606 intron klar - chr3L 445653 intron klar - chr3L_6_445001 chr3L_445001 RAL-320 1250 chr3L 456199 456222 chr3L 456298 456303 10 92 7.5 5.0 6.2 1.4 104 chr3L 456199 intron klar - chr3L 456251 intron klar - chr3L 456303 intron klar - chr3L_10_455001 chr3L_455001 RAL-320 1251 chr3L 456223 456238 chr3L 456297 456303 9 85 4.5 4.5 4.5 1.6 80 chr3L 456223 intron klar - chr3L 456263 intron klar - chr3L 456303 intron klar - chr3L_9_455001 chr3L_455001 RAL-320 1252 chr3L 459962 460009 chr3L 460059 460105 15 87 5.5 8.5 7.0 1.9 143 chr3L 459962 intron klar - chr3L 460034 intron klar - chr3L 460105 intron klar - chr3L_15_460001 chr3L_460001 RAL-320 1253 chr3L 477052 477101 chr3L 477156 477175 17 102 2.5 3.5 3.0 4.2 123 chr3L 477052 intron klar - chr3L 477114 intron klar - chr3L 477175 intron klar - chr3L_17_475001 chr3L_475001 RAL-320 1254 chr3L 514979 515016 chr3L 515108 515146 8 130 3.0 0.5 1.8 2.9 167 chr3L 514979 intron klar - chr3L 515062 intron klar - chr3L 515146 intron klar - chr3L_8_515001 chr3L_515001 RAL-320 1255 chr3L 592947 592967 chr3L 593043 593063 5 96 3.5 6.0 4.8 0.9 116 chr3L 592947 intergenic MED14 + chr3L 593005 intergenic MED14 + chr3L 593063 intergenic MED14 + chr3L_5_590001 chr3L_590001 RAL-320 1256 chr3L 651376 651396 chr3L 651483 651504 6 107 9.5 4.0 6.8 0.8 128 chr3L 651376 intergenic Gale +,CG3402 - chr3L 651440 intergenic CG3402 -,Gale + chr3L 651504 intergenic CG3402 -,Gale + chr3L_6_650001 chr3L_650001 RAL-320 1257 chr3L 651398 651420 chr3L 651476 651528 18 102 7.0 3.0 5.0 3.0 130 chr3L 651398 intergenic Gale +,CG3402 - chr3L 651463 intergenic CG3402 -,Gale + chr3L 651528 intergenic CG3402 -,Gale + chr3L_18_650001 chr3L_650001 RAL-320 1258 chr3L 665848 665883 chr3L 665951 665986 13 99 8.0 5.5 6.8 1.7 138 chr3L 665848 intergenic not near genes chr3L 665917 intergenic not near genes chr3L 665986 intergenic not near genes chr3L_13_665001 chr3L_665001 RAL-320 1259 chr3L 668841 668846 chr3L 668922 668972 7 114 2.0 8.0 5.0 1.2 131 chr3L 668841 intergenic not near genes chr3L 668906 intergenic not near genes chr3L 668972 intergenic not near genes chr3L_7_665001 chr3L_665001 RAL-320 1260 chr3L 732807 732847 chr3L 733048 733089 16 239 3.5 7.0 5.2 2.6 282 chr3L 732807 intergenic not near genes chr3L 732948 intergenic not near genes chr3L 733089 intergenic not near genes chr3L_16_730001 chr3L_730001 RAL-320 1261 chr3L 789902 789933 chr3L 790400 790409 roo 7 495 3.5 1.0 2.2 2.2 507 chr3L 789902 intergenic not near genes chr3L 790156 intergenic not near genes chr3L 790409 intergenic not near genes chr3L_7_790001 chr3L_790001 RAL-320 1262 chr3L 857985 858025 chr3L 866481 866519 Tirant 6 8495 8.5 6.5 7.5 0.7 8534 chr3L 857985 intergenic not near genes chr3L 862252 intergenic not near genes chr3L 866519 5` UTR CG12502 + chr3L_6_860001 chr3L_860001 RAL-320 1263 chr3L 892702 892749 chr3L 892901 892949 8 194 3.0 2.5 2.8 2.1 247 chr3L 892702 3` UTR CG32479 + chr3L 892826 3` UTR CG32479 + chr3L 892949 3` UTR CG32479 + chr3L_8_890001 chr3L_890001 RAL-320 1264 chr3L 905073 905087 chr3L 905173 905191 4 103 0.0 8.0 4.0 0.8 118 chr3L 905073 intergenic not near genes chr3L 905132 intergenic not near genes chr3L 905191 intergenic not near genes chr3L_4_905001 chr3L_905001 RAL-320 1265 chr3L 925158 925170 chr3L 932604 932616 mdg1 6 7446 10.0 4.5 7.2 0.7 7458 chr3L 925158 intron Glut1 + chr3L 928887 intron Glut1 + chr3L 932616 intron Glut1 + chr3L_6_925001 chr3L_925001 RAL-320 1266 chr3L 925174 925209 chr3L 932602 932643 mdg1 20 7441 5.5 4.0 4.8 3.4 7469 chr3L 925174 intron Glut1 + chr3L 928908 intron Glut1 + chr3L 932643 intron Glut1 + chr3L_20_925001 chr3L_925001 RAL-320 1267 chr3L 933890 933944 chr3L 934014 934067 15 119 0.5 4.0 2.2 4.7 177 chr3L 933890 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_15_930001 chr3L_930001 RAL-320 1268 chr3L 939758 939784 chr3L 940894 940918 jockey 11 1139 5.0 4.5 4.8 1.9 1160 chr3L 939758 intron Glut1 + chr3L 940338 intron Glut1 + chr3L 940918 intron Glut1 + chr3L_11_940001 chr3L_940001 RAL-320 1269 chr3L 939787 939800 chr3L 940892 940901 jockey 7 1122 5.5 4.5 5.0 1.2 1114 chr3L 939787 intron Glut1 + chr3L 940344 intron Glut1 + chr3L 940901 intron Glut1 + chr3L_7_940001 chr3L_940001 RAL-320 1270 chr3L 943872 943884 chr3L 943934 943985 4 78 2.0 2.0 2.0 1.3 113 chr3L 943872 intron Glut1 + chr3L 943928 intron Glut1 + chr3L 943985 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-320 1271 chr3L 958300 958347 chr3L 958404 958414 20 100 3.5 4.0 3.8 4.2 114 chr3L 958300 intron Glut1 + chr3L 958357 intron Glut1 + chr3L 958414 intron Glut1 + chr3L_20_955001 chr3L_955001 RAL-320 1272 chr3L 960999 961044 chr3L 961112 961136 17 109 3.5 6.5 5.0 2.8 137 chr3L 960999 intron Glut1 + chr3L 961068 intron Glut1 + chr3L 961136 intron Glut1 + chr3L_17_960001 chr3L_960001 RAL-320 1273 chr3L 1003038 1003081 chr3L 1003134 1003178 14 95 4.0 7.0 5.5 2.2 140 chr3L 1003038 intron trio - chr3L 1003108 intron trio - chr3L 1003178 intron trio - chr3L_14_1000001 chr3L_1000001 RAL-320 1274 chr3L 1031561 1031612 chr3L 1031652 1031673 8 76 12.0 4.0 8.0 0.9 112 chr3L 1031561 intron trio - chr3L 1031617 intron trio - chr3L 1031673 intron trio - chr3L_8_1030001 chr3L_1030001 RAL-320 1275 chr3L 1084335 1084378 chr3L 1084432 1084479 8 97 3.0 3.5 3.2 1.9 144 chr3L 1084335 intron bab1 - chr3L 1084407 intron bab1 - chr3L 1084479 intron bab1 - chr3L_8_1080001 chr3L_1080001 RAL-320 1276 chr3L 1145224 1145239 chr3L 1145320 1145340 6 100 10.5 0.0 5.2 1.0 116 chr3L 1145224 intron bab2 - chr3L 1145282 intron bab2 - chr3L 1145340 intron bab2 - chr3L_6_1145001 chr3L_1145001 RAL-320 1277 chr3L 1154110 1154160 chr3L 1163280 1163315 roo 17 9161 3.0 3.0 3.0 4.2 9205 chr3L 1154110 intron bab2 - chr3L 1158712 intron bab2 - chr3L 1163315 intron bab2 - chr3L_17_1155001 chr3L_1155001 RAL-320 1278 chr3L 1219594 1219624 chr3L 1227336 1227357 412 10 7739 4.0 7.0 5.5 1.5 7763 chr3L 1219594 intron mwh + chr3L 1223476 intron mwh + chr3L 1227357 intron mwh + chr3L_10_1220001 chr3L_1220001 RAL-320 1279 chr3L 1310986 1310996 chr3L 1315834 1315851 4 4847 23.5 46.0 34.8 0.1 4865 chr3L 1310986 exon CG2469 + chr3L 1313418 intergenic CG9186 -,CG9153 + chr3L 1315851 exon CG9153 + chr3L_4_1310001 chr3L_1310001 RAL-320 1280 chr3L 1310981 1311005 chr3L 1315852 1315872 12 4864 24.0 45.0 34.5 0.3 4891 chr3L 1310981 exon CG2469 + chr3L 1313426 intergenic CG9186 -,CG9153 + chr3L 1315872 exon CG9153 + chr3L_12_1310001 chr3L_1310001 RAL-320 1281 chr3L 1374448 1374457 chr3L 1374509 1374518 4 66 8.5 5.5 7.0 0.5 70 chr3L 1374448 intron,intron Ptp61F -,ru + chr3L 1374483 intron,intron Ptp61F -,ru + chr3L 1374518 intron,intron Ptp61F -,ru + chr3L_4_1370001 chr3L_1370001 RAL-320 1282 chr3L 1396738 1396749 chr3L 1396822 1396843 5 96 10.5 5.5 8.0 0.6 105 chr3L 1396738 intron Ptp61F - chr3L 1396790 intron Ptp61F - chr3L 1396843 intron Ptp61F - chr3L_5_1395001 chr3L_1395001 RAL-320 1283 chr3L 1404615 1404625 chr3L 1404707 1404712 4 93 13.0 5.0 9.0 0.4 97 chr3L 1404615 intron Ptp61F - chr3L 1404664 intron Ptp61F - chr3L 1404712 intron Ptp61F - chr3L_4_1400001 chr3L_1400001 RAL-320 1284 chr3L 1404632 1404652 chr3L 1404704 1404733 4 82 3.5 5.0 4.2 0.8 101 chr3L 1404632 intron Ptp61F - chr3L 1404682 intron Ptp61F - chr3L 1404733 intron Ptp61F - chr3L_4_1400001 chr3L_1400001 RAL-320 1285 chr3L 1415768 1415808 chr3L 1415855 1415875 8 78 3.0 3.0 3.0 2.0 107 chr3L 1415768 intron Ptp61F - chr3L 1415822 intron Ptp61F - chr3L 1415875 intron Ptp61F - chr3L_8_1415001 chr3L_1415001 RAL-320 1286 chr3L 1502007 1502018 chr3L 1502078 1502119 8 87 2.0 2.5 2.2 2.5 112 chr3L 1502007 intron pUf68 - chr3L 1502063 intron pUf68 - chr3L 1502119 intron pUf68 - chr3L_8_1500001 chr3L_1500001 RAL-320 1287 chr3L 1505994 1506030 chr3L 1513598 1513617 17.6 12 7608 4.5 4.0 4.2 2.3 7623 chr3L 1505994 intron,intron Psa +,cue - chr3L 1509806 intron,intron Psa +,cue - chr3L 1513617 intron,intron Psa +,cue - chr3L_12_1505001 chr3L_1505001 RAL-320 1288 chr3L 1536837 1536886 chr3L 1536941 1536990 11 102 2.0 3.0 2.5 3.1 153 chr3L 1536837 intergenic CG12091 -,CG7852 + chr3L 1536914 intergenic CG12091 -,CG7852 + chr3L 1536990 intergenic CG7852 +,CG12091 - chr3L_11_1535001 chr3L_1535001 RAL-320 1289 chr3L 1585919 1585935 chr3L 1586016 1586037 6 101 2.5 0.0 1.2 2.7 118 chr3L 1585919 intron CG13917 + chr3L 1585978 intron CG13917 + chr3L 1586037 intron CG13917 + chr3L_6_1585001 chr3L_1585001 RAL-320 1290 chr3L 1613280 1613328 chr3L 1613380 1613401 9 93 4.0 5.5 4.8 1.6 121 chr3L 1613280 intron,intron,exon CG18170 +,CG33791 +,CG12105 - chr3L 1613340 intron,intron,exon CG18170 +,CG33791 +,CG12105 - chr3L 1613401 intron,intron,exon CG18170 +,CG33791 +,CG12105 - chr3L_9_1610001 chr3L_1610001 RAL-320 1291 chr3L 1684011 1684043 chr3L 1684102 1684123 7 88 7.5 4.0 5.8 1.0 112 chr3L 1684011 intron CG7991 + chr3L 1684067 intron CG7991 + chr3L 1684123 intron CG7991 + chr3L_7_1680001 chr3L_1680001 RAL-320 1292 chr3L 1688228 1688270 chr3L 1688377 1688419 8 146 3.0 0.0 1.5 3.2 191 chr3L 1688228 intron CG7991 + chr3L 1688324 intron CG7991 + chr3L 1688419 intron CG7991 + chr3L_8_1685001 chr3L_1685001 RAL-320 1293 chr3L 1697138 1697360 chr3L 1697269 1697282 10 122 19.0 6.0 12.5 0.7 144 chr3L 1697138 intron CG7991 + chr3L 1697210 intron CG7991 + chr3L 1697282 intron CG7991 + chr3L_10_1695001 chr3L_1695001 RAL-320 1294 chr3L 1726590 1726647 chr3L 1726690 1726747 10 94 1.5 5.0 3.2 2.4 157 chr3L 1726590 intron drpr - chr3L 1726668 intron drpr - chr3L 1726747 intron drpr - chr3L_10_1725001 chr3L_1725001 RAL-320 1295 chr3L 1740840 1740885 chr3L 1741098 1741108 pogo 14 251 4.5 3.0 3.8 2.9 268 chr3L 1740840 intron Gk + chr3L 1740974 intron Gk + chr3L 1741108 intron Gk + chr3L_14_1740001 chr3L_1740001 RAL-320 1296 chr3L 1754669 1754722 chr3L 1754808 1754861 20 135 4.0 2.5 3.2 4.8 192 chr3L 1754669 intron Cht2 - chr3L 1754765 intron Cht2 - chr3L 1754861 intron Cht2 - chr3L_20_1750001 chr3L_1750001 RAL-320 1297 chr3L 1805686 1805706 chr3L 1805880 1805900 10 193 5.0 4.0 4.5 1.8 214 chr3L 1805686 exon CG42676 + chr3L 1805793 intron CG42676 + chr3L 1805900 intron CG42676 + chr3L_10_1805001 chr3L_1805001 RAL-320 1298 chr3L 1809989 1810031 chr3L 1810196 1810241 10 210 4.5 5.5 5.0 1.7 252 chr3L 1809989 intergenic not near genes chr3L 1810115 intergenic GV1 + chr3L 1810241 intergenic GV1 + chr3L_10_1810001 chr3L_1810001 RAL-320 1299 chr3L 1853029 1853053 chr3L 1853133 1853157 4 104 5.5 5.5 5.5 0.6 128 chr3L 1853029 intron CG13936 - chr3L 1853093 intron CG13936 - chr3L 1853157 intron CG13936 - chr3L_4_1850001 chr3L_1850001 RAL-320 1300 chr3L 1905330 1905373 chr3L 1905444 1905482 7 113 5.5 9.5 7.5 0.8 152 chr3L 1905330 intron CG1887 - chr3L 1905406 intron CG1887 - chr3L 1905482 intron CG1887 - chr3L_7_1905001 chr3L_1905001 RAL-320 1301 chr3L 1908454 1908492 chr3L 1908576 1908614 15 120 7.5 6.0 6.8 1.9 160 chr3L 1908454 intron CG1887 - chr3L 1908534 intron CG1887 - chr3L 1908614 intron CG1887 - chr3L_15_1905001 chr3L_1905001 RAL-320 1302 chr3L 1920757 1920766 chr3L 1920868 1920877 6 110 3.0 3.5 3.2 1.4 120 chr3L 1920757 intergenic not near genes chr3L 1920817 intergenic Dbx + chr3L 1920877 intergenic Dbx + chr3L_6_1920001 chr3L_1920001 RAL-320 1303 chr3L 1991097 1991148 chr3L 1991196 1991244 15 90 5.0 2.0 3.5 3.3 147 chr3L 1991097 intergenic not near genes chr3L 1991170 intergenic not near genes chr3L 1991244 intergenic not near genes chr3L_15_1990001 chr3L_1990001 RAL-320 1304 chr3L 2039355 2039400 chr3L 2039462 2039511 6 104 6.5 2.0 4.2 1.2 156 chr3L 2039355 intergenic sls - chr3L 2039433 intergenic sls - chr3L 2039511 intergenic sls - chr3L_6_2035001 chr3L_2035001 RAL-320 1305 chr3L 2108246 2108283 chr3L 2113465 2113507 copia 8 5223 3.0 5.5 4.2 1.5 5261 chr3L 2108246 intron sls - chr3L 2110876 intron sls - chr3L 2113507 intron sls - chr3L_8_2110001 chr3L_2110001 RAL-320 1306 chr3L 2139191 2139234 chr3L 2139292 2139319 13 97 3.5 5.0 4.2 2.5 128 chr3L 2139191 intron zormin - chr3L 2139255 intron zormin - chr3L 2139319 intron zormin - chr3L_13_2135001 chr3L_2135001 RAL-320 1307 chr3L 2168756 2168776 chr3L 2168867 2168887 7 111 10.0 4.5 7.2 0.9 131 chr3L 2168756 exon CG15879 - chr3L 2168822 intron CG15879 - chr3L 2168887 intron CG15879 - chr3L_7_2165001 chr3L_2165001 RAL-320 1308 chr3L 2168778 2168801 chr3L 2168863 2168912 18 106 6.5 4.0 5.2 2.9 134 chr3L 2168778 exon CG15879 - chr3L 2168845 intron CG15879 - chr3L 2168912 intron CG15879 - chr3L_18_2165001 chr3L_2165001 RAL-320 1309 chr3L 2176676 2176716 chr3L 2177100 2177145 10 420 3.0 7.0 5.0 1.7 469 chr3L 2176676 intergenic not near genes chr3L 2176910 intergenic not near genes chr3L 2177145 intergenic not near genes chr3L_10_2175001 chr3L_2175001 RAL-320 1310 chr3L 2199800 2199812 chr3L 2199895 2199907 5 96 2.5 7.5 5.0 0.8 107 chr3L 2199800 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199907 intergenic not near genes chr3L_5_2195001 chr3L_2195001 RAL-320 1311 chr3L 2302553 2302599 chr3L 2302660 2302694 13 100 2.5 3.5 3.0 3.2 141 chr3L 2302553 intergenic not near genes chr3L 2302624 intergenic not near genes chr3L 2302694 intergenic not near genes chr3L_13_2300001 chr3L_2300001 RAL-320 1312 chr3L 2307983 2308034 chr3L 2308109 2308135 21 119 5.0 4.0 4.5 3.8 152 chr3L 2307983 intergenic not near genes chr3L 2308059 intergenic not near genes chr3L 2308135 intergenic not near genes chr3L_21_2305001 chr3L_2305001 RAL-320 1313 chr3L 2317500 2317537 chr3L 2317636 2317663 20 134 3.0 2.0 2.5 5.7 163 chr3L 2317500 3` UTR CR45427 - chr3L 2317582 3` UTR CR45427 - chr3L 2317663 intergenic CR45427 - chr3L_20_2315001 chr3L_2315001 RAL-320 1314 chr3L 2331562 2331614 chr3L 2331659 2331705 14 92 7.0 4.0 5.5 2.2 143 chr3L 2331562 intron MsR1 + chr3L 2331634 intron MsR1 + chr3L 2331705 intron MsR1 + chr3L_14_2330001 chr3L_2330001 RAL-320 1315 chr3L 2382683 2382703 chr3L 2382785 2382800 7 98 10.0 5.5 7.8 0.8 117 chr3L 2382683 intergenic not near genes chr3L 2382742 intergenic not near genes chr3L 2382800 intergenic not near genes chr3L_7_2380001 chr3L_2380001 RAL-320 1316 chr3L 2382707 2382728 chr3L 2382784 2382826 13 92 6.0 5.5 5.8 1.9 119 chr3L 2382707 intergenic not near genes chr3L 2382766 intergenic not near genes chr3L 2382826 intergenic not near genes chr3L_13_2380001 chr3L_2380001 RAL-320 1317 chr3L 2411334 2411344 chr3L 2411415 2411439 10 93 6.0 3.0 4.5 1.8 105 chr3L 2411334 intron CG45186 + chr3L 2411386 intron CG45186 + chr3L 2411439 intron CG45186 + chr3L_10_2410001 chr3L_2410001 RAL-320 1318 chr3L 2447491 2447510 chr3L 2456662 2456673 roo 7 9172 9.0 4.0 6.5 0.9 9182 chr3L 2447491 intron CG45186 + chr3L 2452082 intron CG45186 + chr3L 2456673 intron CG45186 + chr3L_7_2450001 chr3L_2450001 RAL-320 1319 chr3L 2447517 2447524 chr3L 2456658 2456665 roo 4 9151 6.5 4.0 5.2 0.6 9148 chr3L 2447517 intron CG45186 + chr3L 2452091 intron CG45186 + chr3L 2456665 intron CG45186 + chr3L_4_2450001 chr3L_2450001 RAL-320 1320 chr3L 2467453 2467485 chr3L 2467549 2467600 7 113 4.5 0.0 2.2 2.2 147 chr3L 2467453 intron CG45186 + chr3L 2467526 intron CG45186 + chr3L 2467600 intron CG45186 + chr3L_7_2465001 chr3L_2465001 RAL-320 1321 chr3L 2473154 2473199 chr3L 2473240 2473281 9 86 6.0 4.0 5.0 1.5 127 chr3L 2473154 intron CG45186 + chr3L 2473218 intron CG45186 + chr3L 2473281 intron CG45186 + chr3L_9_2470001 chr3L_2470001 RAL-320 1322 chr3L 2478886 2479035 chr3L 2478976 2479150 13 113 2.0 3.0 2.5 3.7 264 chr3L 2478886 intron CG45186 + chr3L 2479018 intron CG45186 + chr3L 2479150 intron CG45186 + chr3L_13_2475001 chr3L_2475001 RAL-320 1323 chr3L 2493814 2493846 chr3L 2493905 2493954 6 102 2.5 0.0 1.2 2.7 140 chr3L 2493814 intron CG45186 + chr3L 2493884 intron CG45186 + chr3L 2493954 intron CG45186 + chr3L_6_2490001 chr3L_2490001 RAL-320 1324 chr3L 2533647 2533683 chr3L 2533735 2533760 13 82 6.0 10.5 8.2 1.4 113 chr3L 2533647 intron Spn - chr3L 2533704 intron Spn - chr3L 2533760 intron Spn - chr3L_13_2530001 chr3L_2530001 RAL-320 1325 chr3L 2546741 2546794 chr3L 2546850 2546903 9 106 4.5 5.5 5.0 1.5 162 chr3L 2546741 intron Spn - chr3L 2546822 intron Spn - chr3L 2546903 intron Spn - chr3L_9_2545001 chr3L_2545001 RAL-320 1326 chr3L 2581880 2581914 chr3L 2581994 2582028 13 112 2.0 5.0 3.5 2.9 148 chr3L 2581880 intron msn - chr3L 2581954 intron msn - chr3L 2582028 intron msn - chr3L_13_2580001 chr3L_2580001 RAL-320 1327 chr3L 2595558 2595612 chr3L 2595664 2595718 25 101 5.0 4.0 4.5 4.5 160 chr3L 2595558 3` UTR dos + chr3L 2595638 intergenic dos +,CG16984 +,CG12182 - chr3L 2595718 intergenic CG16984 +,CG12182 -,dos + chr3L_25_2595001 chr3L_2595001 RAL-320 1328 chr3L 2683925 2683976 chr3L 2684021 2684062 18 95 4.5 4.0 4.2 3.5 137 chr3L 2683925 intron Fife - chr3L 2683994 intron Fife - chr3L 2684062 intron Fife - chr3L_18_2680001 chr3L_2680001 RAL-320 1329 chr3L 2711003 2711037 chr3L 2711120 2711148 14 117 4.0 2.5 3.2 3.3 145 chr3L 2711003 intron Fife - chr3L 2711076 intron Fife - chr3L 2711148 intron Fife - chr3L_14_2710001 chr3L_2710001 RAL-320 1330 chr3L 2719519 2719558 chr3L 2719641 2719680 10 122 4.0 5.5 4.8 1.7 161 chr3L 2719519 3` UTR Mrtf - chr3L 2719600 3` UTR Mrtf - chr3L 2719680 3` UTR Mrtf - chr3L_10_2715001 chr3L_2715001 RAL-320 1331 chr3L 2751439 2751458 chr3L 2755752 2755758 F-element 6 4312 8.5 8.5 8.5 0.6 4319 chr3L 2751439 intron Mrtf - chr3L 2753598 intron Mrtf - chr3L 2755758 intron Mrtf - chr3L_6_2750001 chr3L_2750001 RAL-320 1332 chr3L 2795705 2795756 chr3L 2795848 2795869 14 136 1.5 3.0 2.2 4.4 164 chr3L 2795705 intron CG43444 - chr3L 2795787 intron CG43444 - chr3L 2795869 intron CG43444 - chr3L_14_2795001 chr3L_2795001 RAL-320 1333 chr3L 2861170 2861205 chr3L 2861298 2861334 5 138 21.0 32.5 26.8 0.2 164 chr3L 2861170 intron CG43444 - chr3L 2861252 intron CG43444 - chr3L 2861334 intron CG43444 - chr3L_5_2860001 chr3L_2860001 RAL-320 1334 chr3L 2863781 2863806 chr3L 2863881 2863896 11 97 5.5 0.0 2.8 2.9 115 chr3L 2863781 intron CG43444 - chr3L 2863838 intron CG43444 - chr3L 2863896 intron CG43444 - chr3L_11_2860001 chr3L_2860001 RAL-320 1335 chr3L 2882094 2882141 chr3L 2882190 2882236 16 95 4.5 5.0 4.8 2.8 142 chr3L 2882094 intergenic not near genes chr3L 2882165 intergenic not near genes chr3L 2882236 intergenic not near genes chr3L_16_2880001 chr3L_2880001 RAL-320 1336 chr3L 2927821 2927846 chr3L 2936118 2936138 Tirant 8 8294 9.0 6.0 7.5 0.9 8317 chr3L 2927821 intron Shab + chr3L 2931980 intron Shab + chr3L 2936138 intron Shab + chr3L_8_2930001 chr3L_2930001 RAL-320 1337 chr3L 2927849 2927862 chr3L 2936114 2936154 Tirant 5 8289 8.0 6.0 7.0 0.6 8305 chr3L 2927849 intron Shab + chr3L 2932002 intron Shab + chr3L 2936154 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-320 1338 chr3L 2965992 2966037 chr3L 2966094 2966139 23 101 2.5 5.0 3.8 4.8 147 chr3L 2965992 intergenic not near genes chr3L 2966066 intergenic not near genes chr3L 2966139 intergenic not near genes chr3L_23_2965001 chr3L_2965001 RAL-320 1339 chr3L 2966708 2966732 chr3L 2974152 2974176 mdg1 8 7444 7.5 2.5 5.0 1.3 7468 chr3L 2966708 intergenic not near genes chr3L 2970442 intergenic not near genes chr3L 2974176 intergenic not near genes chr3L_8_2970001 chr3L_2970001 RAL-320 1340 chr3L 3027622 3027630 chr3L 3028623 3028651 5 1013 2.0 4.5 3.2 1.2 1029 chr3L 3027622 intergenic not near genes chr3L 3028136 intergenic not near genes chr3L 3028651 intergenic not near genes chr3L_5_3025001 chr3L_3025001 RAL-320 1341 chr3L 3040305 3040356 chr3L 3042114 3042165 S-element 17 1807 2.5 4.5 3.5 3.8 1860 chr3L 3040305 3` UTR CG2162 + chr3L 3041235 intergenic not near genes chr3L 3042165 intergenic Jafrac2 + chr3L_17_3040001 chr3L_3040001 RAL-320 1342 chr3L 3051724 3051757 chr3L 3051985 3052010 pogo 6 260 7.5 3.5 5.5 0.9 286 chr3L 3051724 3` UTR CG32485 + chr3L 3051867 intergenic CG32485 + chr3L 3052010 intergenic CG32485 + chr3L_6_3050001 chr3L_3050001 RAL-320 1343 chr3L 3259818 3259830 chr3L 3259939 3259951 5 121 0.0 7.0 3.5 1.1 133 chr3L 3259818 intron ckd + chr3L 3259884 intron ckd + chr3L 3259951 intron ckd + chr3L_5_3255001 chr3L_3255001 RAL-320 1344 chr3L 3281421 3281476 chr3L 3281932 3281941 Doc 11 504 3.0 4.0 3.5 2.4 520 chr3L 3281421 intron CG12017 + chr3L 3281681 intron CG12017 + chr3L 3281941 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RAL-320 1345 chr3L 3317512 3317563 chr3L 3317611 3317662 17 98 1.5 5.5 3.5 3.8 150 chr3L 3317512 intergenic Drsl5 + chr3L 3317587 intergenic PIG-C -,Drsl5 + chr3L 3317662 intergenic PIG-C - chr3L_17_3315001 chr3L_3315001 RAL-320 1346 chr3L 3436269 3436316 chr3L 3436368 3436415 22 96 4.0 3.0 3.5 4.9 146 chr3L 3436269 intron eIF5B - chr3L 3436342 intron eIF5B - chr3L 3436415 intron eIF5B - chr3L_22_3435001 chr3L_3435001 RAL-320 1347 chr3L 3439576 3439605 chr3L 3439674 3439676 8 101 1.5 3.5 2.5 2.3 100 chr3L 3439576 intron eIF5B - chr3L 3439626 intron eIF5B - chr3L 3439676 intron eIF5B - chr3L_8_3435001 chr3L_3435001 RAL-320 1348 chr3L 3450585 3450624 chr3L 3450690 3450704 13 101 0.0 4.0 2.0 4.3 119 chr3L 3450585 intron eIF5B - chr3L 3450644 intron eIF5B - chr3L 3450704 intron eIF5B - chr3L_13_3450001 chr3L_3450001 RAL-320 1349 chr3L 3470140 3470187 chr3L 3470236 3470283 14 96 1.0 5.0 3.0 3.5 143 chr3L 3470140 intron CG14971 - chr3L 3470212 intron CG14971 - chr3L 3470283 intron CG14971 - chr3L_14_3470001 chr3L_3470001 RAL-320 1350 chr3L 3475067 3475110 chr3L 3475523 3475549 jockey 14 455 3.0 4.0 3.5 3.1 482 chr3L 3475067 intron CG42324 + chr3L 3475308 intron CG42324 + chr3L 3475549 intron CG42324 + chr3L_14_3475001 chr3L_3475001 RAL-320 1351 chr3L 3494176 3494204 chr3L 3494273 3494292 20 96 3.5 5.0 4.2 3.8 116 chr3L 3494176 intron CG42324 + chr3L 3494234 intron CG42324 + chr3L 3494292 intron CG42324 + chr3L_20_3490001 chr3L_3490001 RAL-320 1352 chr3L 3503975 3503983 chr3L 3504081 3504110 7 124 0.0 7.0 3.5 1.6 135 chr3L 3503975 intron CG42324 + chr3L 3504042 intron CG42324 + chr3L 3504110 intron CG42324 + chr3L_7_3500001 chr3L_3500001 RAL-320 1353 chr3L 3573161 3573176 chr3L 3573257 3573279 4 99 8.0 2.5 5.2 0.6 118 chr3L 3573161 intron Eip63E + chr3L 3573220 intron Eip63E + chr3L 3573279 intron Eip63E + chr3L_4_3570001 chr3L_3570001 RAL-320 1354 chr3L 3573178 3573191 chr3L 3573255 3573294 8 94 5.0 2.5 3.8 1.7 116 chr3L 3573178 intron Eip63E + chr3L 3573236 intron Eip63E + chr3L 3573294 intron Eip63E + chr3L_8_3570001 chr3L_3570001 RAL-320 1355 chr3L 3585593 3585624 chr3L 3585700 3585736 9 108 0.0 4.0 2.0 3.0 143 chr3L 3585593 intron Eip63E + chr3L 3585664 intron Eip63E + chr3L 3585736 intron Eip63E + chr3L_9_3585001 chr3L_3585001 RAL-320 1356 chr3L 3601280 3601332 chr3L 3606607 3606653 copia 18 5327 2.5 3.5 3.0 4.5 5373 chr3L 3601280 intron Eip63E + chr3L 3603966 intron Eip63E + chr3L 3606653 intron Eip63E + chr3L_18_3600001 chr3L_3600001 RAL-320 1357 chr3L 3627173 3627214 chr3L 3627277 3627317 7 102 2.5 1.5 2.0 2.3 144 chr3L 3627173 intron dar1 + chr3L 3627245 intron dar1 + chr3L 3627317 intron dar1 + chr3L_7_3625001 chr3L_3625001 RAL-320 1358 chr3L 3642141 3642189 chr3L 3642262 3642305 18 123 3.5 8.5 6.0 2.6 164 chr3L 3642141 intron dar1 + chr3L 3642223 intron dar1 + chr3L 3642305 intron dar1 + chr3L_18_3640001 chr3L_3640001 RAL-320 1359 chr3L 3766722 3766747 chr3L 3766826 3766852 5 105 6.0 1.0 3.5 1.1 130 chr3L 3766722 intron CG32264 - chr3L 3766787 intron CG32264 - chr3L 3766852 intron CG32264 - chr3L_5_3765001 chr3L_3765001 RAL-320 1360 chr3L 3783268 3783290 chr3L 3783352 3783366 6 79 2.0 2.5 2.2 1.9 98 chr3L 3783268 intron CG32264 - chr3L 3783317 intron CG32264 - chr3L 3783366 intron CG32264 - chr3L_6_3780001 chr3L_3780001 RAL-320 1361 chr3L 3797222 3797266 chr3L 3797325 3797369 17 99 1.0 4.5 2.8 4.5 147 chr3L 3797222 intron CG32264 - chr3L 3797296 intron CG32264 - chr3L 3797369 intron CG32264 - chr3L_17_3795001 chr3L_3795001 RAL-320 1362 chr3L 3815031 3815079 chr3L 3815132 3815180 25 100 4.0 4.0 4.0 5.0 149 chr3L 3815031 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815180 intron,intron Scsalpha +,CR43932 - chr3L_25_3815001 chr3L_3815001 RAL-320 1363 chr3L 3833725 3833740 chr3L 3833986 3834001 pogo 4 261 6.5 0.5 3.5 0.9 276 chr3L 3833725 intron enc + chr3L 3833863 intron enc + chr3L 3834001 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-320 1364 chr3L 3889113 3889146 chr3L 3889216 3889249 13 101 0.0 3.0 1.5 5.2 136 chr3L 3889113 intergenic not near genes chr3L 3889181 intergenic not near genes chr3L 3889249 intergenic not near genes chr3L_13_3885001 chr3L_3885001 RAL-320 1365 chr3L 4015718 4015761 chr3L 4015819 4015864 9 102 4.5 3.5 4.0 1.8 146 chr3L 4015718 intergenic not near genes chr3L 4015791 intergenic not near genes chr3L 4015864 intergenic not near genes chr3L_9_4015001 chr3L_4015001 RAL-320 1366 chr3L 4027585 4027637 chr3L 4027764 4027799 22 175 3.0 4.5 3.8 4.6 214 chr3L 4027585 exon Gr64a + chr3L 4027692 intron Gr64a + chr3L 4027799 exon Gr64a + chr3L_22_4025001 chr3L_4025001 RAL-320 1367 chr3L 4097768 4097816 chr3L 4097861 4097879 15 90 2.5 3.0 2.8 3.9 111 chr3L 4097768 exon CG14995 - chr3L 4097824 intron CG14995 - chr3L 4097879 intron CG14995 - chr3L_15_4095001 chr3L_4095001 RAL-320 1368 chr3L 4146801 4146838 chr3L 4146903 4146940 12 102 0.0 4.0 2.0 4.0 139 chr3L 4146801 intergenic not near genes chr3L 4146870 intergenic not near genes chr3L 4146940 intergenic not near genes chr3L_12_4145001 chr3L_4145001 RAL-320 1369 chr3L 4195125 4195168 chr3L 4195249 4195262 5 113 5.5 10.0 7.8 0.6 137 chr3L 4195125 exon CG43367 + chr3L 4195194 intron CG43367 + chr3L 4195262 intron CG43367 + chr3L_5_4195001 chr3L_4195001 RAL-320 1370 chr3L 4214517 4214547 chr3L 4214679 4214709 10 160 6.5 5.5 6.0 1.4 192 chr3L 4214517 intron CG43367 + chr3L 4214613 intron CG43367 + chr3L 4214709 intron CG43367 + chr3L_10_4210001 chr3L_4210001 RAL-320 1371 chr3L 4231154 4231162 chr3L 4231265 4231275 5 112 7.5 12.0 9.8 0.5 121 chr3L 4231154 intron ImpL2 - chr3L 4231214 intron ImpL2 - chr3L 4231275 intron ImpL2 - chr3L_5_4230001 chr3L_4230001 RAL-320 1372 chr3L 4231163 4231186 chr3L 4231251 4231279 7 101 6.0 9.5 7.8 0.8 116 chr3L 4231163 intron ImpL2 - chr3L 4231221 intron ImpL2 - chr3L 4231279 intron ImpL2 - chr3L_7_4230001 chr3L_4230001 RAL-320 1373 chr3L 4278393 4278424 chr3L 4278497 4278528 9 102 6.5 1.5 4.0 1.8 135 chr3L 4278393 intron CG1311 + chr3L 4278460 intron CG1311 + chr3L 4278528 intron CG1311 + chr3L_9_4275001 chr3L_4275001 RAL-320 1374 chr3L 4328729 4328756 chr3L 4336244 4336267 412 5 7510 2.5 9.0 5.8 0.7 7538 chr3L 4328729 intron Cip4 - chr3L 4332498 intron Cip4 - chr3L 4336267 intron Cip4 - chr3L_5_4330001 chr3L_4330001 RAL-320 1375 chr3L 4344870 4345064 chr3L 4344997 4345160 12 104 0.0 0.0 0.0 12.0 290 chr3L 4344870 intron Cip4 - chr3L 4345015 intron Cip4 - chr3L 4345160 intron Cip4 - chr3L_12_4345001 chr3L_4345001 RAL-320 1376 chr3L 4346565 4346583 chr3L 4346663 4346681 9 97 7.5 4.0 5.8 1.3 116 chr3L 4346565 intron,intron Cip4 -,CR45156 + chr3L 4346623 intron,intron Cip4 -,CR45156 + chr3L 4346681 intron,intron Cip4 -,CR45156 + chr3L_9_4345001 chr3L_4345001 RAL-320 1377 chr3L 4360653 4360693 chr3L 4360806 4360845 12 152 3.5 0.5 2.0 4.0 192 chr3L 4360653 intron Cip4 - chr3L 4360749 intron Cip4 - chr3L 4360845 intron Cip4 - chr3L_12_4360001 chr3L_4360001 RAL-320 1378 chr3L 4364202 4364233 chr3L 4364311 4364342 6 109 2.5 7.5 5.0 1.0 140 chr3L 4364202 intergenic Cip4 -,mRpS6 + chr3L 4364272 intergenic Cip4 -,mRpS6 + chr3L 4364342 intergenic mRpS6 +,Cip4 - chr3L_6_4360001 chr3L_4360001 RAL-320 1379 chr3L 4390013 4390032 chr3L 4390112 4390124 7 96 8.5 5.0 6.8 0.9 111 chr3L 4390013 intron slow + chr3L 4390068 intron slow + chr3L 4390124 intron slow + chr3L_7_4390001 chr3L_4390001 RAL-320 1380 chr3L 4410905 4410923 chr3L 4411002 4411020 10 97 8.0 6.0 7.0 1.2 115 chr3L 4410905 intron DOR + chr3L 4410962 intron DOR + chr3L 4411020 intron DOR + chr3L_10_4410001 chr3L_4410001 RAL-320 1381 chr3L 4580289 4580328 chr3L 4580395 4580434 11 98 7.5 5.5 6.5 1.5 145 chr3L 4580289 intron CG42540 + chr3L 4580362 intron CG42540 + chr3L 4580434 intron CG42540 + chr3L_11_4580001 chr3L_4580001 RAL-320 1382 chr3L 4652555 4652578 chr3L 4652658 4652666 10 101 4.5 3.0 3.8 2.1 111 chr3L 4652555 intron axo - chr3L 4652610 intron axo - chr3L 4652666 intron axo - chr3L_10_4650001 chr3L_4650001 RAL-320 1383 chr3L 4652579 4652601 chr3L 4652653 4652705 5 91 3.5 3.0 3.2 1.2 126 chr3L 4652579 intron axo - chr3L 4652642 intron axo - chr3L 4652705 intron axo - chr3L_5_4650001 chr3L_4650001 RAL-320 1384 chr3L 4676018 4676051 chr3L 4676119 4676152 7 100 3.0 1.0 2.0 2.3 134 chr3L 4676018 intron axo - chr3L 4676085 intron axo - chr3L 4676152 intron axo - chr3L_7_4675001 chr3L_4675001 RAL-320 1385 chr3L 4699275 4699316 chr3L 4699375 4699416 14 99 1.0 0.5 0.8 7.8 141 chr3L 4699275 intron RhoGEF64C + chr3L 4699346 intron RhoGEF64C + chr3L 4699416 intron RhoGEF64C + chr3L_14_4695001 chr3L_4695001 RAL-320 1386 chr3L 4714571 4714623 chr3L 4714669 4714683 14 85 4.5 3.0 3.8 2.9 112 chr3L 4714571 intron RhoGEF64C + chr3L 4714627 intron RhoGEF64C + chr3L 4714683 intron RhoGEF64C + chr3L_14_4710001 chr3L_4710001 RAL-320 1387 chr3L 4726413 4726461 chr3L 4726512 4726541 15 96 7.0 5.0 6.0 2.1 128 chr3L 4726413 intron RhoGEF64C + chr3L 4726477 intron RhoGEF64C + chr3L 4726541 intron RhoGEF64C + chr3L_15_4725001 chr3L_4725001 RAL-320 1388 chr3L 4743009 4743060 chr3L 4743109 4743133 16 86 3.0 3.5 3.2 3.8 124 chr3L 4743009 intron RhoGEF64C + chr3L 4743071 intron RhoGEF64C + chr3L 4743133 intron RhoGEF64C + chr3L_16_4740001 chr3L_4740001 RAL-320 1389 chr3L 4837869 4837925 chr3L 4837968 4838003 24 96 6.0 5.0 5.5 3.7 134 chr3L 4837869 3` UTR CG13707 - chr3L 4837936 3` UTR CG13707 - chr3L 4838003 3` UTR CG13707 - chr3L_24_4835001 chr3L_4835001 RAL-320 1390 chr3L 4859993 4860036 chr3L 4860127 4860145 7 123 1.0 6.5 3.8 1.5 152 chr3L 4859993 exon CG32235 - chr3L 4860069 exon CG32235 - chr3L 4860145 5` UTR CG32235 - chr3L_7_4860001 chr3L_4860001 RAL-320 1391 chr3L 4860037 4860043 chr3L 4860126 4860177 6 110 0.5 6.5 3.5 1.3 140 chr3L 4860037 exon CG32235 - chr3L 4860107 5` UTR CG32235 - chr3L 4860177 5` UTR CG32235 - chr3L_6_4860001 chr3L_4860001 RAL-320 1392 chr3L 4901122 4901135 chr3L 4907332 4907345 diver 7 6210 9.0 2.5 5.8 1.0 6223 chr3L 4901122 intergenic CG13704 + chr3L 4904234 intergenic not near genes chr3L 4907345 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-320 1393 chr3L 4958427 4958446 chr3L 4958502 4958509 13 89 2.5 4.0 3.2 3.1 82 chr3L 4958427 intron Con - chr3L 4958468 intron Con - chr3L 4958509 intron Con - chr3L_13_4955001 chr3L_4955001 RAL-320 1394 chr3L 5034142 5034191 chr3L 5043314 5043363 roo 14 9168 3.0 5.0 4.0 2.8 9221 chr3L 5034142 intron Con - chr3L 5038752 intron Con - chr3L 5043363 intron Con - chr3L_14_5035001 chr3L_5035001 RAL-320 1395 chr3L 5045437 5045456 chr3L 5050238 5050257 Doc 4 4801 10.0 3.5 6.8 0.5 4820 chr3L 5045437 intron Con - chr3L 5047847 intron Con - chr3L 5050257 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-320 1396 chr3L 5045467 5045486 chr3L 5050233 5050286 Doc 6 4792 4.0 2.5 3.2 1.4 4819 chr3L 5045467 intron Con - chr3L 5047876 intron Con - chr3L 5050286 intron Con - chr3L_6_5045001 chr3L_5045001 RAL-320 1397 chr3L 5066282 5066325 chr3L 5066401 5066433 9 116 2.5 4.0 3.2 2.1 151 chr3L 5066282 intron Con - chr3L 5066358 intron Con - chr3L 5066433 intron Con - chr3L_9_5065001 chr3L_5065001 RAL-320 1398 chr3L 5103593 5103612 chr3L 5103691 5103712 8 100 8.5 0.0 4.2 1.5 119 chr3L 5103593 intergenic not near genes chr3L 5103652 intergenic not near genes chr3L 5103712 intergenic not near genes chr3L_8_5100001 chr3L_5100001 RAL-320 1399 chr3L 5104471 5104511 chr3L 5124625 5124660 11 20153 2.5 2.5 2.5 3.1 20189 chr3L 5104471 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124660 intergenic not near genes chr3L_11_5110001 chr3L_5110001 RAL-320 1400 chr3L 5164623 5164666 chr3L 5164719 5164761 12 95 4.0 6.0 5.0 2.0 138 chr3L 5164623 intron shep - chr3L 5164692 intron shep - chr3L 5164761 intron shep - chr3L_12_5160001 chr3L_5160001 RAL-320 1401 chr3L 5203085 5203114 chr3L 5203210 5203238 10 122 2.5 4.5 3.5 2.2 153 chr3L 5203085 intron shep - chr3L 5203162 intron shep - chr3L 5203238 intron shep - chr3L_10_5200001 chr3L_5200001 RAL-320 1402 chr3L 5248979 5249004 chr3L 5249083 5249108 15 104 2.5 5.0 3.8 3.1 129 chr3L 5248979 intron shep - chr3L 5249044 intron shep - chr3L 5249108 intron shep - chr3L_15_5245001 chr3L_5245001 RAL-320 1403 chr3L 5261145 5261182 chr3L 5261245 5261277 11 100 5.0 5.5 5.2 1.8 132 chr3L 5261145 intron shep - chr3L 5261211 intron shep - chr3L 5261277 intron shep - chr3L_11_5260001 chr3L_5260001 RAL-320 1404 chr3L 5271180 5271194 chr3L 5271274 5271292 5 97 0.0 0.0 0.0 5.0 112 chr3L 5271180 intron shep - chr3L 5271236 intron shep - chr3L 5271292 intron shep - chr3L_5_5270001 chr3L_5270001 RAL-320 1405 chr3L 5299162 5299169 chr3L 5306607 5306615 Quasimodo 4 7446 2.0 0.5 1.2 1.8 7453 chr3L 5299162 intergenic not near genes chr3L 5302888 intergenic not near genes chr3L 5306615 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-320 1406 chr3L 5306655 5306678 chr3L 5306765 5306767 6 105 0.0 2.0 1.0 3.0 112 chr3L 5306655 intergenic not near genes chr3L 5306711 intergenic not near genes chr3L 5306767 intergenic not near genes chr3L_6_5305001 chr3L_5305001 RAL-320 1407 chr3L 5482930 5483073 chr3L 5483149 5483210 7 177 2.0 1.0 1.5 2.8 280 chr3L 5482930 exon CG4835 + chr3L 5483070 exon CG4835 + chr3L 5483210 exon CG4835 + chr3L_7_5480001 chr3L_5480001 RAL-320 1408 chr3L 5493174 5493222 chr3L 5493340 5493363 8 162 5.5 2.5 4.0 1.6 189 chr3L 5493174 intergenic CR44520 - chr3L 5493268 intergenic CR44520 - chr3L 5493363 intergenic CR44520 - chr3L_8_5490001 chr3L_5490001 RAL-320 1409 chr3L 5537722 5537752 chr3L 5538071 5538114 jockey 8 351 0.5 11.0 5.8 1.2 392 chr3L 5537722 intergenic not near genes chr3L 5537918 intergenic CG10625 - chr3L 5538114 intergenic CG10625 - chr3L_8_5535001 chr3L_5535001 RAL-320 1410 chr3L 5581996 5582006 chr3L 5582093 5582102 4 97 8.5 0.0 4.2 0.8 106 chr3L 5581996 intergenic not near genes chr3L 5582049 intergenic not near genes chr3L 5582102 intergenic not near genes chr3L_4_5580001 chr3L_5580001 RAL-320 1411 chr3L 5601113 5601143 chr3L 5601225 5601273 10 128 4.5 7.5 6.0 1.4 160 chr3L 5601113 3` UTR CG10590 - chr3L 5601193 3` UTR CG10590 - chr3L 5601273 3` UTR CG10590 - chr3L_10_5600001 chr3L_5600001 RAL-320 1412 chr3L 5612669 5612707 chr3L 5612775 5612815 11 105 4.5 5.0 4.8 1.9 146 chr3L 5612669 intergenic not near genes chr3L 5612742 intergenic not near genes chr3L 5612815 intergenic not near genes chr3L_11_5610001 chr3L_5610001 RAL-320 1413 chr3L 5677168 5677198 chr3L 5677264 5677288 7 92 0.0 7.0 3.5 1.6 120 chr3L 5677168 intron sif + chr3L 5677228 intron sif + chr3L 5677288 intron sif + chr3L_7_5675001 chr3L_5675001 RAL-320 1414 chr3L 5910022 5910031 chr3L 5910283 5910292 pogo 6 261 11.0 10.0 10.5 0.5 270 chr3L 5910022 intron CG13288 + chr3L 5910157 intron CG13288 + chr3L 5910292 intron CG13288 + chr3L_6_5910001 chr3L_5910001 RAL-320 1415 chr3L 5910035 5910063 chr3L 5910280 5910311 pogo 12 258 5.5 9.5 7.5 1.4 276 chr3L 5910035 intron CG13288 + chr3L 5910173 intron CG13288 + chr3L 5910311 intron CG13288 + chr3L_12_5910001 chr3L_5910001 RAL-320 1416 chr3L 5926303 5926339 chr3L 5926508 5926511 11 196 7.0 4.0 5.5 1.7 208 chr3L 5926303 intron Vap-33B + chr3L 5926407 intron Vap-33B + chr3L 5926511 intron Vap-33B + chr3L_11_5925001 chr3L_5925001 RAL-320 1417 chr3L 6001664 6001716 chr3L 6004384 6004436 jockey 9 2720 6.5 2.0 4.2 1.7 2772 chr3L 6001664 intron PVRAP + chr3L 6003050 intron PVRAP + chr3L 6004436 intron PVRAP + chr3L_9_6000001 chr3L_6000001 RAL-320 1418 chr3L 6040357 6040394 chr3L 6042733 6042770 Doc 8 2375 3.5 7.0 5.2 1.3 2413 chr3L 6040357 intergenic Jon65Aiv + chr3L 6041564 intergenic not near genes chr3L 6042770 intergenic not near genes chr3L_8_6040001 chr3L_6040001 RAL-320 1419 chr3L 6077779 6077804 chr3L 6077864 6077904 6 98 2.5 0.0 1.2 2.7 125 chr3L 6077779 intron ssp6 + chr3L 6077842 intron ssp6 + chr3L 6077904 intron ssp6 + chr3L_6_6075001 chr3L_6075001 RAL-320 1420 chr3L 6102943 6102958 chr3L 6103045 6103055 5 99 9.5 1.0 5.2 0.8 112 chr3L 6102943 intron Ets65A + chr3L 6102999 intron Ets65A + chr3L 6103055 intron Ets65A + chr3L_5_6100001 chr3L_6100001 RAL-320 1421 chr3L 6116679 6116722 chr3L 6116783 6116826 15 102 2.5 4.0 3.2 3.6 147 chr3L 6116679 intron Ets65A + chr3L 6116752 intron Ets65A + chr3L 6116826 intron Ets65A + chr3L_15_6115001 chr3L_6115001 RAL-320 1422 chr3L 6119122 6119158 chr3L 6119219 6119255 13 95 5.0 0.0 2.5 3.7 133 chr3L 6119122 exon Ets65A + chr3L 6119188 intron Ets65A + chr3L 6119255 intron Ets65A + chr3L_13_6115001 chr3L_6115001 RAL-320 1423 chr3L 6169112 6169125 chr3L 6169213 6169225 6 101 9.5 7.0 8.2 0.7 113 chr3L 6169112 3` UTR CG10289 - chr3L 6169168 3` UTR CG10289 - chr3L 6169225 3` UTR CG10289 - chr3L_6_6165001 chr3L_6165001 RAL-320 1424 chr3L 6220899 6220946 chr3L 6230065 6230072 roo 12 9166 3.5 8.5 6.0 1.7 9173 chr3L 6220899 5` UTR pncr008:3L + chr3L 6225486 intergenic not near genes chr3L 6230072 intergenic not near genes chr3L_12_6225001 chr3L_6225001 RAL-320 1425 chr3L 6259366 6259401 chr3L 6261191 6261226 15 1824 22.0 24.0 23.0 0.6 1860 chr3L 6259366 3` UTR ImpL3 - chr3L 6260296 exon ImpL3 - chr3L 6261226 intron ImpL3 - chr3L_15_6260001 chr3L_6260001 RAL-320 1426 chr3L 6259247 6259284 chr3L 6261272 6261329 17 2036 30.0 33.5 31.8 0.5 2082 chr3L 6259247 3` UTR ImpL3 - chr3L 6260288 exon ImpL3 - chr3L 6261329 intron ImpL3 - chr3L_17_6260001 chr3L_6260001 RAL-320 1427 chr3L 6278192 6278242 chr3L 6278288 6278338 7 94 2.5 0.0 1.2 3.2 146 chr3L 6278192 intergenic not near genes chr3L 6278265 intergenic not near genes chr3L 6278338 intergenic not near genes chr3L_7_6275001 chr3L_6275001 RAL-320 1428 chr3L 6334999 6335039 chr3L 6335490 6335530 297 6 490 1.5 8.5 5.0 1.0 531 chr3L 6334999 intron CG13300 - chr3L 6335264 intron CG13300 - chr3L 6335530 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-320 1429 chr3L 6405643 6405680 chr3L 6432126 6432164 roo 13 26483 6.5 2.5 4.5 2.4 26521 chr3L 6405643 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432164 intron CG42747 + chr3L_13_6415001 chr3L_6415001 RAL-320 1430 chr3L 6513355 6513377 chr3L 6513460 6513483 11 106 3.5 5.5 4.5 2.0 128 chr3L 6513355 intron sfl + chr3L 6513419 intron sfl + chr3L 6513483 intron sfl + chr3L_11_6510001 chr3L_6510001 RAL-320 1431 chr3L 6562832 6562864 chr3L 6562932 6562964 9 100 3.0 6.5 4.8 1.6 132 chr3L 6562832 intron CG18769 + chr3L 6562898 intron CG18769 + chr3L 6562964 intron CG18769 + chr3L_9_6560001 chr3L_6560001 RAL-320 1432 chr3L 6781106 6781150 chr3L 6783137 6783180 Doc 8 2030 3.5 0.0 1.8 2.9 2074 chr3L 6781106 intergenic not near genes chr3L 6782143 intergenic not near genes chr3L 6783180 intergenic not near genes chr3L_8_6780001 chr3L_6780001 RAL-320 1433 chr3L 6806492 6806528 chr3L 6806594 6806635 10 106 6.0 7.0 6.5 1.3 143 chr3L 6806492 intergenic not near genes chr3L 6806564 intergenic not near genes chr3L 6806635 intergenic not near genes chr3L_10_6805001 chr3L_6805001 RAL-320 1434 chr3L 6835911 6835918 chr3L 6836009 6836016 4 98 8.0 2.0 5.0 0.7 105 chr3L 6835911 intergenic not near genes chr3L 6835964 intergenic not near genes chr3L 6836016 intergenic not near genes chr3L_4_6835001 chr3L_6835001 RAL-320 1435 chr3L 6855917 6855955 chr3L 6860717 6860746 Doc 11 4794 1.5 2.5 2.0 3.7 4829 chr3L 6855917 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860746 intergenic not near genes chr3L_11_6855001 chr3L_6855001 RAL-320 1436 chr3L 6887497 6887515 chr3L 6895009 6895027 roo 5 7510 10.5 6.5 8.5 0.5 7530 chr3L 6887497 intergenic not near genes chr3L 6891262 intergenic not near genes chr3L 6895027 intergenic not near genes chr3L_5_6890001 chr3L_6890001 RAL-320 1437 chr3L 6887516 6887541 chr3L 6895008 6895053 roo 8 7508 7.5 6.5 7.0 1.0 7537 chr3L 6887516 intergenic not near genes chr3L 6891284 intergenic not near genes chr3L 6895053 intergenic not near genes chr3L_8_6890001 chr3L_6890001 RAL-320 1438 chr3L 6994871 6994905 chr3L 6995502 6995536 BS 5 631 0.5 6.5 3.5 1.1 665 chr3L 6994871 intergenic bin + chr3L 6995204 intergenic not near genes chr3L 6995536 intergenic not near genes chr3L_5_6995001 chr3L_6995001 RAL-320 1439 chr3L 7033177 7033205 chr3L 7033252 7033307 16 89 3.5 5.0 4.2 3.1 130 chr3L 7033177 intron Mp + chr3L 7033242 intron Mp + chr3L 7033307 intron Mp + chr3L_16_7030001 chr3L_7030001 RAL-320 1440 chr3L 7061387 7061407 chr3L 7061493 7061513 6 105 8.0 4.0 6.0 0.9 126 chr3L 7061387 intron CG8641 - chr3L 7061450 intron CG8641 - chr3L 7061513 intron CG8641 - chr3L_6_7060001 chr3L_7060001 RAL-320 1441 chr3L 7078367 7078395 chr3L 7078803 7078851 10 444 6.0 3.5 4.8 1.7 484 chr3L 7078367 intergenic not near genes chr3L 7078609 intergenic not near genes chr3L 7078851 intergenic not near genes chr3L_10_7075001 chr3L_7075001 RAL-320 1442 chr3L 7150869 7150874 chr3L 7150965 7150970 4 96 7.5 8.5 8.0 0.4 101 chr3L 7150869 intron corn - chr3L 7150920 intron corn - chr3L 7150970 intron corn - chr3L_4_7150001 chr3L_7150001 RAL-320 1443 chr3L 7150876 7150902 chr3L 7150962 7150998 9 94 3.5 7.5 5.5 1.4 122 chr3L 7150876 intron corn - chr3L 7150937 intron corn - chr3L 7150998 intron corn - chr3L_9_7150001 chr3L_7150001 RAL-320 1444 chr3L 7179608 7179645 chr3L 7179689 7179690 6 66 7.0 5.5 6.2 0.8 82 chr3L 7179608 intron Dscam2 - chr3L 7179649 intron Dscam2 - chr3L 7179690 intron Dscam2 - chr3L_6_7175001 chr3L_7175001 RAL-320 1445 chr3L 7201678 7201723 chr3L 7201818 7201873 8 145 8.0 4.0 6.0 1.1 195 chr3L 7201678 intergenic not near genes chr3L 7201776 intergenic not near genes chr3L 7201873 intergenic not near genes chr3L_8_7200001 chr3L_7200001 RAL-320 1446 chr3L 7227361 7227397 chr3L 7227509 7227553 15 152 5.5 5.0 5.2 2.4 192 chr3L 7227361 intergenic not near genes chr3L 7227457 intergenic not near genes chr3L 7227553 intergenic not near genes chr3L_15_7225001 chr3L_7225001 RAL-320 1447 chr3L 7258912 7258932 chr3L 7259072 7259089 5 158 2.5 4.5 3.5 1.1 177 chr3L 7258912 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259089 intron CG14830 - chr3L_5_7255001 chr3L_7255001 RAL-320 1448 chr3L 7311572 7311621 chr3L 7311683 7311727 22 102 2.0 5.5 3.8 4.6 155 chr3L 7311572 intron unc-13-4A - chr3L 7311650 intron unc-13-4A - chr3L 7311727 intron unc-13-4A - chr3L_22_7310001 chr3L_7310001 RAL-320 1449 chr3L 7341197 7341248 chr3L 7341300 7341351 14 100 6.5 8.5 7.5 1.6 154 chr3L 7341197 intron lark + chr3L 7341274 intron lark + chr3L 7341351 intron lark + chr3L_14_7340001 chr3L_7340001 RAL-320 1450 chr3L 7371177 7371211 chr3L 7371269 7371312 10 97 3.0 4.5 3.8 2.1 135 chr3L 7371177 intron akirin + chr3L 7371244 intron akirin + chr3L 7371312 intron akirin + chr3L_10_7370001 chr3L_7370001 RAL-320 1451 chr3L 7377295 7377342 chr3L 7380420 7380467 297 17 3121 1.0 1.5 1.2 7.7 3172 chr3L 7377295 intron SMSr - chr3L 7378881 intron SMSr - chr3L 7380467 intron SMSr - chr3L_17_7375001 chr3L_7375001 RAL-320 1452 chr3L 7449434 7449456 chr3L 7449528 7449556 9 96 0.0 5.5 2.8 2.4 122 chr3L 7449434 intron CG42458 + chr3L 7449495 intron CG42458 + chr3L 7449556 intron CG42458 + chr3L_9_7445001 chr3L_7445001 RAL-320 1453 chr3L 7450683 7450715 chr3L 7450776 7450815 7 100 5.0 2.5 3.8 1.5 132 chr3L 7450683 intron CG42458 + chr3L 7450749 intron CG42458 + chr3L 7450815 intron CG42458 + chr3L_7_7450001 chr3L_7450001 RAL-320 1454 chr3L 7462965 7462987 chr3L 7463043 7463086 11 97 5.0 6.0 5.5 1.7 121 chr3L 7462965 intergenic not near genes chr3L 7463026 intergenic not near genes chr3L 7463086 intergenic not near genes chr3L_11_7460001 chr3L_7460001 RAL-320 1455 chr3L 7480037 7480070 chr3L 7480146 7480179 17 108 3.5 4.5 4.0 3.4 142 chr3L 7480037 intergenic not near genes chr3L 7480108 intergenic not near genes chr3L 7480179 intergenic not near genes chr3L_17_7480001 chr3L_7480001 RAL-320 1456 chr3L 7498028 7498067 chr3L 7498177 7498200 9 138 3.5 6.5 5.0 1.5 172 chr3L 7498028 exon CG8539 - chr3L 7498114 exon CG8539 - chr3L 7498200 exon CG8539 - chr3L_9_7495001 chr3L_7495001 RAL-320 1457 chr3L 7498738 7498773 chr3L 7503536 7503571 F-element 11 4796 4.5 5.0 4.8 1.9 4833 chr3L 7498738 5` UTR CG8539 - chr3L 7501154 intergenic not near genes chr3L 7503571 intergenic not near genes chr3L_11_7500001 chr3L_7500001 RAL-320 1458 chr3L 7527523 7527553 chr3L 7527627 7527634 5 99 0.5 3.0 1.8 1.8 111 chr3L 7527523 3` UTR ltl + chr3L 7527578 3` UTR ltl + chr3L 7527634 3` UTR ltl + chr3L_5_7525001 chr3L_7525001 RAL-320 1459 chr3L 7576196 7576209 chr3L 7576304 7576317 4 108 10.0 5.0 7.5 0.5 121 chr3L 7576196 intergenic not near genes chr3L 7576256 intergenic not near genes chr3L 7576317 intergenic not near genes chr3L_4_7575001 chr3L_7575001 RAL-320 1460 chr3L 7576211 7576243 chr3L 7576299 7576351 15 105 4.5 4.0 4.2 2.9 140 chr3L 7576211 intergenic not near genes chr3L 7576281 intergenic not near genes chr3L 7576351 intergenic not near genes chr3L_15_7575001 chr3L_7575001 RAL-320 1461 chr3L 7691812 7691863 chr3L 7691924 7691945 15 106 4.5 4.5 4.5 2.7 133 chr3L 7691812 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691878 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691945 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_15_7690001 chr3L_7690001 RAL-320 1462 chr3L 7793692 7793735 chr3L 7800764 7800807 297 26 7070 6.5 4.0 5.2 4.2 7115 chr3L 7793692 intron CG32369 - chr3L 7797250 intron CG32369 - chr3L 7800807 intron CG32369 - chr3L_26_7795001 chr3L_7795001 RAL-320 1463 chr3L 7856413 7856427 chr3L 7856506 7856530 7 100 9.5 5.0 7.2 0.9 117 chr3L 7856413 intron Pdp1 - chr3L 7856472 intron Pdp1 - chr3L 7856530 intron Pdp1 - chr3L_7_7855001 chr3L_7855001 RAL-320 1464 chr3L 7867799 7867947 chr3L 7867897 7868060 11 110 2.5 3.0 2.8 2.9 261 chr3L 7867799 intergenic Pdp1 - chr3L 7867930 intergenic not near genes chr3L 7868060 intergenic not near genes chr3L_11_7865001 chr3L_7865001 RAL-320 1465 chr3L 7876084 7876117 chr3L 7876183 7876216 11 96 0.0 0.0 0.0 11.0 132 chr3L 7876084 intron CG32365 + chr3L 7876150 intron CG32365 + chr3L 7876216 intron CG32365 + chr3L_11_7875001 chr3L_7875001 RAL-320 1466 chr3L 7886508 7886545 chr3L 7889031 7889082 Stalker4 14 2533 3.5 2.5 3.0 3.5 2574 chr3L 7886508 intron CG32365 + chr3L 7887795 intron CG32365 + chr3L 7889082 intron CG32365 + chr3L_14_7885001 chr3L_7885001 RAL-320 1467 chr3L 7916814 7916853 chr3L 7926005 7926044 roo 14 9188 5.5 5.0 5.2 2.3 9230 chr3L 7916814 3` UTR syd - chr3L 7921429 intron syd - chr3L 7926044 3` UTR syd - chr3L_14_7920001 chr3L_7920001 RAL-320 1468 chr3L 7936833 7936869 chr3L 7936936 7936947 10 99 2.5 2.5 2.5 2.9 114 chr3L 7936833 3` UTR Srp9 + chr3L 7936890 3` UTR Srp9 + chr3L 7936947 3` UTR Srp9 + chr3L_10_7935001 chr3L_7935001 RAL-320 1469 chr3L 7985349 7985366 chr3L 7987697 7987713 NOF 10 2346 9.0 7.5 8.2 1.1 2364 chr3L 7985349 intron nmo + chr3L 7986531 intron nmo + chr3L 7987713 intron nmo + chr3L_10_7985001 chr3L_7985001 RAL-320 1470 chr3L 7985372 7985388 chr3L 7987694 7987736 NOF 9 2341 4.5 7.0 5.8 1.3 2364 chr3L 7985372 intron nmo + chr3L 7986554 intron nmo + chr3L 7987736 intron nmo + chr3L_9_7985001 chr3L_7985001 RAL-320 1471 chr3L 8026584 8026614 chr3L 8026682 8026712 9 97 6.5 5.5 6.0 1.3 128 chr3L 8026584 intron nmo + chr3L 8026648 intron nmo + chr3L 8026712 intron nmo + chr3L_9_8025001 chr3L_8025001 RAL-320 1472 chr3L 8062846 8062973 chr3L 8062944 8063106 4 116 4.0 3.5 3.8 0.8 260 chr3L 8062846 intergenic not near genes chr3L 8062976 intergenic not near genes chr3L 8063106 intergenic not near genes chr3L_4_8060001 chr3L_8060001 RAL-320 1473 chr3L 8070602 8070610 chr3L 8070727 8070735 4 125 0.0 0.0 0.0 4.0 133 chr3L 8070602 intron Ect4 + chr3L 8070668 intron Ect4 + chr3L 8070735 intron Ect4 + chr3L_4_8070001 chr3L_8070001 RAL-320 1474 chr3L 8203550 8203557 chr3L 8203622 8203627 5 77 7.0 6.0 6.5 0.7 77 chr3L 8203550 intergenic CG13679 + chr3L 8203588 intergenic CG13679 + chr3L 8203627 intergenic CG13679 + chr3L_5_8200001 chr3L_8200001 RAL-320 1475 chr3L 8233527 8233567 chr3L 8238992 8239032 Rt1a 10 5462 2.5 3.0 2.8 2.6 5505 chr3L 8233527 intron CG7213 - chr3L 8236280 intron CG7213 - chr3L 8239032 intron,intron CG7213 -,Dscam4 + chr3L_10_8235001 chr3L_8235001 RAL-320 1476 chr3L 8248324 8248343 chr3L 8248405 8248406 5 94 5.0 5.0 5.0 0.8 82 chr3L 8248324 intron Dscam4 + chr3L 8248365 intron Dscam4 + chr3L 8248406 intron Dscam4 + chr3L_5_8245001 chr3L_8245001 RAL-320 1477 chr3L 8273033 8273084 chr3L 8273152 8273203 12 118 3.0 4.5 3.8 2.5 170 chr3L 8273033 intron Dscam4 + chr3L 8273118 intron Dscam4 + chr3L 8273203 exon Dscam4 + chr3L_12_8270001 chr3L_8270001 RAL-320 1478 chr3L 8375763 8375793 chr3L 8375937 8375967 8 171 7.5 7.0 7.2 1.0 204 chr3L 8375763 intron ImpE1 + chr3L 8375865 intron ImpE1 + chr3L 8375967 intron ImpE1 + chr3L_8_8375001 chr3L_8375001 RAL-320 1479 chr3L 8375794 8375810 chr3L 8375933 8375980 8 166 4.5 6.0 5.2 1.3 186 chr3L 8375794 intron ImpE1 + chr3L 8375887 intron ImpE1 + chr3L 8375980 intron ImpE1 + chr3L_8_8375001 chr3L_8375001 RAL-320 1480 chr3L 8395828 8395869 chr3L 8395928 8395935 12 97 4.5 4.0 4.2 2.3 107 chr3L 8395828 intergenic CG7120 + chr3L 8395882 intergenic CG7120 + chr3L 8395935 intergenic CG7120 + chr3L_12_8395001 chr3L_8395001 RAL-320 1481 chr3L 8451369 8451415 chr3L 8451467 8451513 12 98 3.0 3.0 3.0 3.0 144 chr3L 8451369 intron Gug + chr3L 8451441 intron Gug + chr3L 8451513 intron Gug + chr3L_12_8450001 chr3L_8450001 RAL-320 1482 chr3L 8456484 8456489 chr3L 8456568 8456600 4 103 9.0 9.0 9.0 0.4 116 chr3L 8456484 intron Gug + chr3L 8456542 intron Gug + chr3L 8456600 intron Gug + chr3L_4_8455001 chr3L_8455001 RAL-320 1483 chr3L 8481796 8481800 chr3L 8490955 8490963 roo 4 9170 2.5 6.5 4.5 0.7 9167 chr3L 8481796 intron CG43163 - chr3L 8486380 intron CG43163 - chr3L 8490963 intron CG43163 - chr3L_4_8485001 chr3L_8485001 RAL-320 1484 chr3L 8498293 8498320 chr3L 8505780 8505807 blood 6 7486 5.5 9.0 7.2 0.7 7514 chr3L 8498293 intron CG43163 - chr3L 8502050 intron CG43163 - chr3L 8505807 intron CG43163 - chr3L_6_8500001 chr3L_8500001 RAL-320 1485 chr3L 8551724 8551773 chr3L 8551827 8551870 21 98 2.5 4.0 3.2 5.0 146 chr3L 8551724 intron rhea + chr3L 8551797 intron rhea + chr3L 8551870 intron rhea + chr3L_21_8550001 chr3L_8550001 RAL-320 1486 chr3L 8579870 8579877 chr3L 8579944 8579977 4 94 6.5 8.5 7.5 0.5 107 chr3L 8579870 intron CG43078 + chr3L 8579924 intron CG43078 + chr3L 8579977 intron CG43078 + chr3L_4_8575001 chr3L_8575001 RAL-320 1487 chr3L 8619490 8619543 chr3L 8619599 8619652 22 107 4.0 3.0 3.5 4.9 162 chr3L 8619490 intergenic S-Lap1 +,S-Lap2 + chr3L 8619571 intergenic S-Lap1 +,S-Lap2 + chr3L 8619652 intergenic S-Lap1 +,S-Lap2 + chr3L_22_8615001 chr3L_8615001 RAL-320 1488 chr3L 8662632 8662673 chr3L 8662724 8662740 15 91 4.5 4.0 4.2 2.9 108 chr3L 8662632 intergenic not near genes chr3L 8662686 intergenic not near genes chr3L 8662740 intergenic not near genes chr3L_15_8660001 chr3L_8660001 RAL-320 1489 chr3L 8668375 8668388 chr3L 8668439 8668487 5 72 0.0 3.0 1.5 2.0 112 chr3L 8668375 intergenic not near genes chr3L 8668431 intergenic not near genes chr3L 8668487 intergenic not near genes chr3L_5_8665001 chr3L_8665001 RAL-320 1490 chr3L 8717245 8717272 chr3L 8717462 8717494 4 213 6.0 6.5 6.2 0.6 249 chr3L 8717245 intergenic not near genes chr3L 8717370 intergenic not near genes chr3L 8717494 intergenic not near genes chr3L_4_8715001 chr3L_8715001 RAL-320 1491 chr3L 8717275 8717288 chr3L 8717458 8717486 11 199 3.0 5.5 4.2 2.1 211 chr3L 8717275 intergenic not near genes chr3L 8717380 intergenic not near genes chr3L 8717486 intergenic not near genes chr3L_11_8715001 chr3L_8715001 RAL-320 1492 chr3L 8730551 8730606 chr3L 8730698 8730740 24 144 44.0 39.0 41.5 0.6 189 chr3L 8730551 3` UTR Cp19 + chr3L 8730646 intergenic Cp19 + chr3L 8730740 intergenic Cp19 + chr3L_24_8730001 chr3L_8730001 RAL-320 1493 chr3L 8791259 8791308 chr3L 8796699 8796747 I-element 8 5432 3.0 0.5 1.8 2.9 5488 chr3L 8791259 exon Fhos + chr3L 8794003 intron Fhos + chr3L 8796747 intron Fhos + chr3L_8_8790001 chr3L_8790001 RAL-320 1494 chr3L 8816942 8816955 chr3L 8817039 8817052 6 97 10.0 4.5 7.2 0.7 110 chr3L 8816942 intergenic not near genes chr3L 8816997 intergenic not near genes chr3L 8817052 intergenic not near genes chr3L_6_8815001 chr3L_8815001 RAL-320 1495 chr3L 8816959 8816991 chr3L 8817038 8817088 11 92 6.0 4.5 5.2 1.8 129 chr3L 8816959 intergenic not near genes chr3L 8817024 intergenic not near genes chr3L 8817088 intergenic not near genes chr3L_11_8815001 chr3L_8815001 RAL-320 1496 chr3L 8847415 8847459 chr3L 8847533 8847577 14 116 5.0 4.0 4.5 2.5 162 chr3L 8847415 intron dally + chr3L 8847496 intron dally + chr3L 8847577 intron dally + chr3L_14_8845001 chr3L_8845001 RAL-320 1497 chr3L 8854618 8854670 chr3L 8854724 8854771 31 103 5.5 3.5 4.5 5.6 153 chr3L 8854618 intron dally + chr3L 8854694 intron dally + chr3L 8854771 intron dally + chr3L_31_8850001 chr3L_8850001 RAL-320 1498 chr3L 8861530 8861549 chr3L 8861623 8861660 7 108 3.0 3.5 3.2 1.7 130 chr3L 8861530 intron dally + chr3L 8861595 intron dally + chr3L 8861660 intron dally + chr3L_7_8860001 chr3L_8860001 RAL-320 1499 chr3L 8928248 8928294 chr3L 8928344 8928390 9 95 3.5 2.0 2.8 2.4 142 chr3L 8928248 intron Tsp66E + chr3L 8928319 intron Tsp66E + chr3L 8928390 intron Tsp66E + chr3L_9_8925001 chr3L_8925001 RAL-320 1500 chr3L 8928641 8928659 chr3L 8928717 8928759 10 83 2.0 6.5 4.2 1.9 118 chr3L 8928641 intron Tsp66E + chr3L 8928700 intron Tsp66E + chr3L 8928759 intron Tsp66E + chr3L_10_8925001 chr3L_8925001 RAL-320 1501 chr3L 9003950 9003977 chr3L 9004031 9004049 10 87 3.0 3.5 3.2 2.4 99 chr3L 9003950 intergenic not near genes chr3L 9004000 intergenic not near genes chr3L 9004049 intergenic not near genes chr3L_10_9000001 chr3L_9000001 RAL-320 1502 chr3L 9036563 9036572 chr3L 9036666 9036675 5 103 3.0 8.5 5.8 0.7 112 chr3L 9036563 intergenic not near genes chr3L 9036619 intergenic not near genes chr3L 9036675 intergenic not near genes chr3L_5_9035001 chr3L_9035001 RAL-320 1503 chr3L 9076928 9076958 chr3L 9084487 9084513 412 9 7565 5.5 3.5 4.5 1.6 7585 chr3L 9076928 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084513 exon Tequila + chr3L_9_9080001 chr3L_9080001 RAL-320 1504 chr3L 9111129 9111178 chr3L 9111225 9111239 12 92 8.0 4.5 6.2 1.7 110 chr3L 9111129 intron bol - chr3L 9111184 intron bol - chr3L 9111239 intron bol - chr3L_12_9110001 chr3L_9110001 RAL-320 1505 chr3L 9130536 9130581 chr3L 9134317 9134349 412 9 3777 8.0 5.5 6.8 1.2 3813 chr3L 9130536 intergenic bol - chr3L 9132442 intergenic not near genes chr3L 9134349 intergenic Dhpr + chr3L_9_9130001 chr3L_9130001 RAL-320 1506 chr3L 9164689 9164713 chr3L 9166169 9166200 hobo 9 1477 4.5 0.0 2.2 2.8 1511 chr3L 9164689 intron Rdl - chr3L 9165444 intron Rdl - chr3L 9166200 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-320 1507 chr3L 9172266 9172297 chr3L 9172358 9172394 6 82 5.0 6.5 5.8 0.9 128 chr3L 9172266 intron Rdl - chr3L 9172330 intron Rdl - chr3L 9172394 intron Rdl - chr3L_6_9170001 chr3L_9170001 RAL-320 1508 chr3L 9183633 9183648 chr3L 9183704 9183723 5 75 2.5 4.0 3.2 1.2 90 chr3L 9183633 intergenic not near genes chr3L 9183678 intergenic not near genes chr3L 9183723 intergenic not near genes chr3L_5_9180001 chr3L_9180001 RAL-320 1509 chr3L 9219234 9219269 chr3L 9219915 9219921 jockey 12 681 7.5 3.0 5.2 1.9 687 chr3L 9219234 intergenic not near genes chr3L 9219578 intergenic not near genes chr3L 9219921 intergenic not near genes chr3L_12_9215001 chr3L_9215001 RAL-320 1510 chr3L 9270612 9270647 chr3L 9278377 9278402 roo 6 7764 8.0 3.0 5.5 0.9 7790 chr3L 9270612 intron GluRIB + chr3L 9274507 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-320 1511 chr3L 9332859 9332882 chr3L 9336392 9336435 12 3536 24.0 30.0 27.0 0.4 3576 chr3L 9332859 intergenic not near genes chr3L 9334647 exon PGRP-LA + chr3L 9336435 intron PGRP-LA + chr3L_12_9330001 chr3L_9330001 RAL-320 1512 chr3L 9443491 9443540 chr3L 9445302 9445351 S-element 15 1809 6.0 2.5 4.2 2.9 1860 chr3L 9443491 intron CG33926 + chr3L 9444421 intron CG33926 + chr3L 9445351 intron CG33926 + chr3L_15_9440001 chr3L_9440001 RAL-320 1513 chr3L 9501683 9501709 chr3L 9502189 9502215 roo 9 505 6.0 0.5 3.2 2.1 532 chr3L 9501683 intron path - chr3L 9501949 intron path - chr3L 9502215 intron path - chr3L_9_9500001 chr3L_9500001 RAL-320 1514 chr3L 9510891 9510956 chr3L 9511004 9511033 8 102 0.0 3.0 1.5 3.2 142 chr3L 9510891 intron RpS9 - chr3L 9510962 intron RpS9 - chr3L 9511033 intron RpS9 - chr3L_8_9510001 chr3L_9510001 RAL-320 1515 chr3L 9518783 9518837 chr3L 9521294 9521337 17 2500 8.0 2.5 5.2 2.7 2554 chr3L 9518783 intron CG33700 - chr3L 9520060 intron CG33700 - chr3L 9521337 intron CG33700 - chr3L_17_9520001 chr3L_9520001 RAL-320 1516 chr3L 9532480 9532513 chr3L 9532596 9532629 6 114 2.0 4.0 3.0 1.5 149 chr3L 9532480 intergenic not near genes chr3L 9532554 intergenic not near genes chr3L 9532629 intergenic not near genes chr3L_6_9530001 chr3L_9530001 RAL-320 1517 chr3L 9571881 9571925 chr3L 9572249 9572293 jockey 18 368 4.5 4.5 4.5 3.3 412 chr3L 9571881 intron CG42673 + chr3L 9572087 intron CG42673 + chr3L 9572293 intron CG42673 + chr3L_18_9570001 chr3L_9570001 RAL-320 1518 chr3L 9575892 9575948 chr3L 9580990 9581005 jockey 20 5091 4.0 3.5 3.8 4.2 5113 chr3L 9575892 intron CG42673 + chr3L 9578448 intron CG42673 + chr3L 9581005 intron CG42673 + chr3L_20_9575001 chr3L_9575001 RAL-320 1519 chr3L 9604225 9604240 chr3L 9604339 9604344 4 111 0.0 1.5 0.8 2.2 119 chr3L 9604225 intron CG3280 + chr3L 9604284 intron CG3280 + chr3L 9604344 intron CG3280 + chr3L_4_9600001 chr3L_9600001 RAL-320 1520 chr3L 9629723 9629768 chr3L 9629819 9629864 11 94 2.5 7.0 4.8 1.9 141 chr3L 9629723 intron CG8336 + chr3L 9629794 intron CG8336 + chr3L 9629864 intron CG8336 + chr3L_11_9625001 chr3L_9625001 RAL-320 1521 chr3L 9635558 9635605 chr3L 9635655 9635686 17 96 3.0 3.5 3.2 4.0 128 chr3L 9635558 intron fry - chr3L 9635622 intron fry - chr3L 9635686 exon fry - chr3L_17_9635001 chr3L_9635001 RAL-320 1522 chr3L 9689504 9689536 chr3L 9689599 9689636 10 96 7.0 6.5 6.8 1.3 132 chr3L 9689504 intron CG6767 - chr3L 9689570 intron CG6767 - chr3L 9689636 intron CG6767 - chr3L_10_9685001 chr3L_9685001 RAL-320 1523 chr3L 9697759 9697794 chr3L 9697862 9697906 25 109 9.0 5.5 7.2 3.0 147 chr3L 9697759 intergenic not near genes chr3L 9697832 intergenic not near genes chr3L 9697906 intergenic UbcD4 + chr3L_25_9695001 chr3L_9695001 RAL-320 1524 chr3L 9715579 9715624 chr3L 9715675 9715711 13 95 4.0 3.5 3.8 2.7 132 chr3L 9715579 intron vsg + chr3L 9715645 intron vsg + chr3L 9715711 intron vsg + chr3L_13_9715001 chr3L_9715001 RAL-320 1525 chr3L 9741613 9741628 chr3L 9741725 9741740 5 112 5.5 6.5 6.0 0.7 127 chr3L 9741613 intron,intron CG42268 -,CR44348 + chr3L 9741676 intron,intron CG42268 -,CR44348 + chr3L 9741740 intron,intron CG42268 -,CR44348 + chr3L_5_9740001 chr3L_9740001 RAL-320 1526 chr3L 9775347 9775395 chr3L 9775725 9775775 9 377 0.5 3.0 1.8 3.2 428 chr3L 9775347 intron CG8177 + chr3L 9775561 intron CG8177 + chr3L 9775775 intron CG8177 + chr3L_9_9775001 chr3L_9775001 RAL-320 1527 chr3L 9831708 9831736 chr3L 9831809 9831836 8 101 2.5 8.5 5.5 1.2 128 chr3L 9831708 intron CG43897 + chr3L 9831772 intron CG43897 + chr3L 9831836 intron CG43897 + chr3L_8_9830001 chr3L_9830001 RAL-320 1528 chr3L 9918864 9918913 chr3L 9918979 9919028 12 110 3.5 6.5 5.0 2.0 164 chr3L 9918864 intron CG34356 + chr3L 9918946 intron CG34356 + chr3L 9919028 intron CG34356 + chr3L_12_9915001 chr3L_9915001 RAL-320 1529 chr3L 9929651 9929696 chr3L 9938450 9938496 roo 6 8800 4.5 4.0 4.2 1.2 8845 chr3L 9929651 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938496 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-320 1530 chr3L 9951176 9951231 chr3L 9951283 9951284 18 95 4.5 4.0 4.2 3.5 108 chr3L 9951176 intron CG34356 + chr3L 9951230 intron CG34356 + chr3L 9951284 intron CG34356 + chr3L_18_9950001 chr3L_9950001 RAL-320 1531 chr3L 10003132 10003172 chr3L 10003249 10003289 20 116 7.5 4.5 6.0 2.9 157 chr3L 10003132 intron dpr6 + chr3L 10003210 intron dpr6 + chr3L 10003289 intron dpr6 + chr3L_20_10000001 chr3L_10000001 RAL-320 1532 chr3L 10007172 10007206 chr3L 10007295 10007328 12 123 3.0 6.0 4.5 2.2 156 chr3L 10007172 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007328 intron dpr6 + chr3L_12_10005001 chr3L_10005001 RAL-320 1533 chr3L 10049553 10049570 chr3L 10049628 10049668 5 90 2.5 4.0 3.2 1.2 115 chr3L 10049553 intron dpr6 + chr3L 10049610 intron dpr6 + chr3L 10049668 intron dpr6 + chr3L_5_10045001 chr3L_10045001 RAL-320 1534 chr3L 10060099 10060112 chr3L 10067693 10067711 17.6 4 7598 8.5 4.5 6.5 0.5 7612 chr3L 10060099 intron dpr6 + chr3L 10063905 intron dpr6 + chr3L 10067711 intron dpr6 + chr3L_4_10060001 chr3L_10060001 RAL-320 1535 chr3L 10082575 10082583 chr3L 10082647 10082684 4 77 3.0 2.5 2.8 1.1 109 chr3L 10082575 intron dpr6 + chr3L 10082630 intron dpr6 + chr3L 10082684 intron dpr6 + chr3L_4_10080001 chr3L_10080001 RAL-320 1536 chr3L 10214719 10214829 chr3L 10214818 10214940 9 123 0.0 0.0 0.0 9.0 221 chr3L 10214719 intergenic not near genes chr3L 10214830 intergenic not near genes chr3L 10214940 intergenic not near genes chr3L_9_10210001 chr3L_10210001 RAL-320 1537 chr3L 10222745 10222770 chr3L 10222845 10222870 11 99 0.5 5.0 2.8 2.9 125 chr3L 10222745 intron scramb1 - chr3L 10222808 intron scramb1 - chr3L 10222870 intron scramb1 - chr3L_11_10220001 chr3L_10220001 RAL-320 1538 chr3L 10250333 10250356 chr3L 10250423 10250467 11 104 0.5 3.5 2.0 3.7 134 chr3L 10250333 intergenic not near genes chr3L 10250400 intergenic not near genes chr3L 10250467 intergenic not near genes chr3L_11_10250001 chr3L_10250001 RAL-320 1539 chr3L 10272485 10272531 chr3L 10272612 10272612 13 117 6.0 3.0 4.5 2.4 127 chr3L 10272485 intergenic not near genes chr3L 10272548 intergenic not near genes chr3L 10272612 intergenic not near genes chr3L_13_10270001 chr3L_10270001 RAL-320 1540 chr3L 10308738 10308760 chr3L 10308835 10308857 6 92 4.0 8.0 6.0 0.9 119 chr3L 10308738 intergenic not near genes chr3L 10308798 intergenic not near genes chr3L 10308857 intergenic not near genes chr3L_6_10305001 chr3L_10305001 RAL-320 1541 chr3L 10390233 10390263 chr3L 10390345 10390375 10 112 2.0 3.0 2.5 2.9 142 chr3L 10390233 intergenic not near genes chr3L 10390304 intergenic not near genes chr3L 10390375 intergenic not near genes chr3L_10_10390001 chr3L_10390001 RAL-320 1542 chr3L 10414930 10414977 chr3L 10417317 10417319 Doc 20 2378 1.0 3.5 2.2 6.2 2389 chr3L 10414930 intergenic CG12362 + chr3L 10416124 intergenic not near genes chr3L 10417319 intergenic not near genes chr3L_20_10415001 chr3L_10415001 RAL-320 1543 chr3L 10424589 10424629 chr3L 10424677 10424698 13 86 2.5 6.5 4.5 2.4 109 chr3L 10424589 intergenic not near genes chr3L 10424644 intergenic not near genes chr3L 10424698 intergenic not near genes chr3L_13_10420001 chr3L_10420001 RAL-320 1544 chr3L 10450677 10450716 chr3L 10450777 10450816 15 99 0.0 6.0 3.0 3.8 139 chr3L 10450677 intergenic not near genes chr3L 10450746 intergenic not near genes chr3L 10450816 intergenic not near genes chr3L_15_10450001 chr3L_10450001 RAL-320 1545 chr3L 10479473 10479493 chr3L 10479573 10479593 10 99 0.0 3.0 1.5 4.0 120 chr3L 10479473 intergenic not near genes chr3L 10479533 intergenic not near genes chr3L 10479593 intergenic not near genes chr3L_10_10475001 chr3L_10475001 RAL-320 1546 chr3L 10502026 10502068 chr3L 10502142 10502154 9 109 5.5 5.5 5.5 1.4 128 chr3L 10502026 intron A2bp1 + chr3L 10502090 intron A2bp1 + chr3L 10502154 intron A2bp1 + chr3L_9_10500001 chr3L_10500001 RAL-320 1547 chr3L 10509469 10509479 chr3L 10509618 10509628 4 149 10.0 3.0 6.5 0.5 159 chr3L 10509469 intron A2bp1 + chr3L 10509548 intron A2bp1 + chr3L 10509628 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-320 1548 chr3L 10509484 10509505 chr3L 10509613 10509647 4 124 7.0 3.0 5.0 0.7 163 chr3L 10509484 intron A2bp1 + chr3L 10509566 intron A2bp1 + chr3L 10509647 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-320 1549 chr3L 10532743 10532765 chr3L 10532822 10532864 7 92 3.5 2.0 2.8 1.8 121 chr3L 10532743 intron A2bp1 + chr3L 10532804 intron A2bp1 + chr3L 10532864 intron A2bp1 + chr3L_7_10530001 chr3L_10530001 RAL-320 1550 chr3L 10600435 10600454 chr3L 10600537 10600537 9 100 6.5 0.0 3.2 2.1 102 chr3L 10600435 intergenic not near genes chr3L 10600486 intergenic not near genes chr3L 10600537 intergenic not near genes chr3L_9_10600001 chr3L_10600001 RAL-320 1551 chr3L 10603694 10603732 chr3L 10603904 10603922 12 208 0.5 3.0 1.8 4.3 228 chr3L 10603694 intergenic not near genes chr3L 10603808 intergenic not near genes chr3L 10603922 intergenic not near genes chr3L_12_10600001 chr3L_10600001 RAL-320 1552 chr3L 10621848 10621875 chr3L 10621945 10621981 7 105 1.5 5.0 3.2 1.7 133 chr3L 10621848 intergenic not near genes chr3L 10621914 intergenic not near genes chr3L 10621981 intergenic not near genes chr3L_7_10620001 chr3L_10620001 RAL-320 1553 chr3L 10694907 10694909 chr3L 10695019 10695021 4 112 2.0 5.0 3.5 0.9 114 chr3L 10694907 intron NijA - chr3L 10694964 intron NijA - chr3L 10695021 intron NijA - chr3L_4_10690001 chr3L_10690001 RAL-320 1554 chr3L 10694910 10694932 chr3L 10695012 10695044 15 110 2.0 4.0 3.0 3.8 134 chr3L 10694910 intron NijA - chr3L 10694977 intron NijA - chr3L 10695044 exon NijA - chr3L_15_10690001 chr3L_10690001 RAL-320 1555 chr3L 10745521 10745558 chr3L 10745621 10745658 16 99 5.5 3.0 4.2 3.1 137 chr3L 10745521 intergenic not near genes chr3L 10745590 intergenic not near genes chr3L 10745658 intergenic not near genes chr3L_16_10745001 chr3L_10745001 RAL-320 1556 chr3L 10795043 10795070 chr3L 10795143 10795168 6 100 2.5 0.0 1.2 2.7 125 chr3L 10795043 5` UTR CR44546 + chr3L 10795106 5` UTR CR44546 + chr3L 10795168 5` UTR CR44546 + chr3L_6_10795001 chr3L_10795001 RAL-320 1557 chr3L 10889222 10889251 chr3L 10889317 10889334 12 90 10.0 3.0 6.5 1.6 112 chr3L 10889222 intergenic not near genes chr3L 10889278 intergenic not near genes chr3L 10889334 intergenic not near genes chr3L_12_10885001 chr3L_10885001 RAL-320 1558 chr3L 10997576 10997626 chr3L 10997694 10997719 7 107 0.0 6.5 3.2 1.7 143 chr3L 10997576 intron klu - chr3L 10997648 intron klu - chr3L 10997719 intron klu - chr3L_7_10995001 chr3L_10995001 RAL-320 1559 chr3L 11042097 11042152 chr3L 11042256 11042311 11 157 5.0 0.0 2.5 3.1 214 chr3L 11042097 intron CG43693 - chr3L 11042204 intron CG43693 - chr3L 11042311 intron CG43693 - chr3L_11_11040001 chr3L_11040001 RAL-320 1560 chr3L 11087047 11087089 chr3L 11088855 11088877 S-element 8 1806 2.0 7.5 4.8 1.4 1830 chr3L 11087047 intron JIL-1 - chr3L 11087962 intron JIL-1 - chr3L 11088877 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-320 1561 chr3L 11134335 11134386 chr3L 11134453 11134503 17 117 5.0 1.5 3.2 4.0 168 chr3L 11134335 3` UTR CG42575 + chr3L 11134419 3` UTR CG42575 + chr3L 11134503 3` UTR CG42575 + chr3L_17_11130001 chr3L_11130001 RAL-320 1562 chr3L 11158173 11158402 chr3L 11158357 11158514 5 150 19.0 23.5 21.2 0.2 341 chr3L 11158173 exon CG32082 + chr3L 11158344 exon CG32082 + chr3L 11158514 exon CG32082 + chr3L_5_11155001 chr3L_11155001 RAL-320 1563 chr3L 11158510 11158545 chr3L 11158633 11158655 18 125 21.5 32.0 26.8 0.6 145 chr3L 11158510 exon CG32082 + chr3L 11158582 intron CG32082 + chr3L 11158655 exon CG32082 + chr3L_18_11155001 chr3L_11155001 RAL-320 1564 chr3L 11158788 11158797 chr3L 11158919 11158937 7 151 17.0 7.0 12.0 0.5 149 chr3L 11158788 exon CG32082 + chr3L 11158862 intron CG32082 + chr3L 11158937 exon CG32082 + chr3L_7_11155001 chr3L_11155001 RAL-320 1565 chr3L 11158800 11158804 chr3L 11158918 11158934 4 125 15.0 7.0 11.0 0.3 134 chr3L 11158800 exon CG32082 + chr3L 11158867 intron CG32082 + chr3L 11158934 exon CG32082 + chr3L_4_11155001 chr3L_11155001 RAL-320 1566 chr3L 11158928 11158945 chr3L 11159297 11159304 6 371 14.5 23.5 19.0 0.3 376 chr3L 11158928 exon CG32082 + chr3L 11159116 intron CG32082 + chr3L 11159304 exon CG32082 + chr3L_6_11155001 chr3L_11155001 RAL-320 1567 chr3L 11158946 11158966 chr3L 11159294 11159314 4 355 17.0 23.0 20.0 0.2 368 chr3L 11158946 exon CG32082 + chr3L 11159130 intron CG32082 + chr3L 11159314 exon CG32082 + chr3L_4_11155001 chr3L_11155001 RAL-320 1568 chr3L 11217495 11217536 chr3L 11217598 11217639 15 103 3.5 3.5 3.5 3.3 144 chr3L 11217495 intron CG42671 + chr3L 11217567 intron CG42671 + chr3L 11217639 intron CG42671 + chr3L_15_11215001 chr3L_11215001 RAL-320 1569 chr3L 11224528 11224576 chr3L 11224670 11224712 12 141 4.5 3.0 3.8 2.5 184 chr3L 11224528 intron CG42671 + chr3L 11224620 intron CG42671 + chr3L 11224712 intron CG42671 + chr3L_12_11220001 chr3L_11220001 RAL-320 1570 chr3L 11241771 11241783 chr3L 11241873 11241885 5 102 0.0 4.0 2.0 1.7 114 chr3L 11241771 intergenic not near genes chr3L 11241828 intergenic not near genes chr3L 11241885 intergenic not near genes chr3L_5_11240001 chr3L_11240001 RAL-320 1571 chr3L 11264447 11264491 chr3L 11271419 11271443 17.6 15 6967 6.5 3.0 4.8 2.6 6996 chr3L 11264447 intergenic not near genes chr3L 11267945 intergenic not near genes chr3L 11271443 intergenic not near genes chr3L_15_11265001 chr3L_11265001 RAL-320 1572 chr3L 11303027 11303044 chr3L 11303133 11303143 4 104 6.5 0.0 3.2 1.0 116 chr3L 11303027 intergenic not near genes chr3L 11303085 intergenic not near genes chr3L 11303143 intergenic not near genes chr3L_4_11300001 chr3L_11300001 RAL-320 1573 chr3L 11304704 11304735 chr3L 11304878 11304953 5 209 3.0 0.5 1.8 1.8 249 chr3L 11304704 intergenic not near genes chr3L 11304828 intergenic not near genes chr3L 11304953 intergenic not near genes chr3L_5_11300001 chr3L_11300001 RAL-320 1574 chr3L 11353114 11353166 chr3L 11353217 11353269 14 99 6.0 9.0 7.5 1.6 155 chr3L 11353114 intergenic not near genes chr3L 11353192 intergenic not near genes chr3L 11353269 intergenic not near genes chr3L_14_11350001 chr3L_11350001 RAL-320 1575 chr3L 11432885 11432940 chr3L 11432984 11433034 19 95 2.0 2.0 2.0 6.3 149 chr3L 11432885 intergenic not near genes chr3L 11432960 intergenic not near genes chr3L 11433034 intergenic not near genes chr3L_19_11430001 chr3L_11430001 RAL-320 1576 chr3L 11435541 11435588 chr3L 11435730 11435772 20 187 9.0 2.0 5.5 3.1 231 chr3L 11435541 intergenic CG6149 -,CR44548 + chr3L 11435656 5` UTR CR44548 + chr3L 11435772 5` UTR CR44548 + chr3L_20_11435001 chr3L_11435001 RAL-320 1577 chr3L 11579541 11579584 chr3L 11579667 11579710 12 123 3.5 5.0 4.2 2.3 169 chr3L 11579541 intergenic CG43390 - chr3L 11579626 intergenic CG43390 - chr3L 11579710 intergenic CG43390 - chr3L_12_11575001 chr3L_11575001 RAL-320 1578 chr3L 11587905 11587954 chr3L 11588001 11588024 8 89 3.0 5.5 4.2 1.5 119 chr3L 11587905 intergenic rt - chr3L 11587964 intergenic rt - chr3L 11588024 intergenic rt - chr3L_8_11585001 chr3L_11585001 RAL-320 1579 chr3L 11590248 11590271 chr3L 11590358 11590381 6 109 0.0 3.0 1.5 2.4 133 chr3L 11590248 intergenic CG7377 + chr3L 11590314 intergenic CG7377 + chr3L 11590381 intergenic CG7377 +,CG33268 - chr3L_6_11590001 chr3L_11590001 RAL-320 1580 chr3L 11590741 11590777 chr3L 11590843 11590879 19 100 4.0 4.5 4.2 3.7 138 chr3L 11590741 intergenic CG33268 - chr3L 11590810 intergenic CG33268 - chr3L 11590879 3` UTR CG33268 - chr3L_19_11590001 chr3L_11590001 RAL-320 1581 chr3L 11670391 11670432 chr3L 11670591 11670627 20 200 8.0 6.0 7.0 2.5 236 chr3L 11670391 intron CG32085 - chr3L 11670509 intron CG32085 - chr3L 11670627 intron CG32085 - chr3L_20_11670001 chr3L_11670001 RAL-320 1582 chr3L 11676793 11676832 chr3L 11676876 11676900 17 90 2.0 4.0 3.0 4.2 107 chr3L 11676793 intron CG32085 - chr3L 11676846 intron CG32085 - chr3L 11676900 intron CG32085 - chr3L_17_11675001 chr3L_11675001 RAL-320 1583 chr3L 11723071 11723108 chr3L 11727886 11727923 Doc 14 4812 4.0 8.5 6.2 1.9 4852 chr3L 11723071 3` UTR Bmcp + chr3L 11725497 intron Bmcp + chr3L 11727923 3` UTR Bmcp + chr3L_14_11725001 chr3L_11725001 RAL-320 1584 chr3L 11744001 11744043 chr3L 11744129 11744136 9 117 3.0 1.5 2.2 2.8 135 chr3L 11744001 exon CG6024 - chr3L 11744068 intron CG6024 - chr3L 11744136 intron CG6024 - chr3L_9_11740001 chr3L_11740001 RAL-320 1585 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464652 12.5 26.5 19.5 0.2 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-320 1586 chr3L 11833722 11833754 chr3L 11833994 11834032 10 277 3.0 1.5 2.2 3.1 310 chr3L 11833722 intergenic CycA - chr3L 11833877 intergenic CycA - chr3L 11834032 intergenic CycA - chr3L_10_11830001 chr3L_11830001 RAL-320 1587 chr3L 11846394 11846405 chr3L 11846522 11846533 4 126 1.0 5.5 3.2 1.0 139 chr3L 11846394 intergenic not near genes chr3L 11846464 intergenic not near genes chr3L 11846533 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-320 1588 chr3L 11846406 11846418 chr3L 11846513 11846546 6 121 0.5 3.5 2.0 2.0 140 chr3L 11846406 intergenic not near genes chr3L 11846476 intergenic not near genes chr3L 11846546 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-320 1589 chr3L 11849313 11849352 chr3L 11849431 11849472 8 117 6.5 6.0 6.2 1.1 159 chr3L 11849313 intergenic not near genes chr3L 11849392 intergenic not near genes chr3L 11849472 intergenic not near genes chr3L_8_11845001 chr3L_11845001 RAL-320 1590 chr3L 11850119 11850170 chr3L 11850234 11850285 15 108 4.5 4.0 4.2 2.9 166 chr3L 11850119 intergenic not near genes chr3L 11850202 intergenic CG44837 - chr3L 11850285 intergenic CG44837 - chr3L_15_11850001 chr3L_11850001 RAL-320 1591 chr3L 11864538 11864571 chr3L 11865847 11865873 pogo 15 1306 2.5 7.5 5.0 2.5 1335 chr3L 11864538 intron CG44837 - chr3L 11865206 intron CG44837 - chr3L 11865873 intron CG44837 - chr3L_15_11865001 chr3L_11865001 RAL-320 1592 chr3L 11887239 11887289 chr3L 11887356 11887395 9 115 2.5 2.0 2.2 2.8 156 chr3L 11887239 intron CG44837 - chr3L 11887317 intron,3` UTR CG44837 -,CG5897 - chr3L 11887395 intron,3` UTR CG44837 -,CG5897 - chr3L_9_11885001 chr3L_11885001 RAL-320 1593 chr3L 11943474 11943520 chr3L 11943594 11943641 14 119 2.5 5.0 3.8 2.9 167 chr3L 11943474 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943641 3` UTR CG5883 - chr3L_14_11940001 chr3L_11940001 RAL-320 1594 chr3L 12013892 12013938 chr3L 12014003 12014049 19 106 4.5 2.5 3.5 4.2 157 chr3L 12013892 intron rols - chr3L 12013970 intron rols - chr3L 12014049 intron rols - chr3L_19_12010001 chr3L_12010001 RAL-320 1595 chr3L 12019315 12019351 chr3L 12019443 12019484 12 132 3.5 2.0 2.8 3.2 169 chr3L 12019315 intron rols - chr3L 12019400 intron rols - chr3L 12019484 intron rols - chr3L_12_12015001 chr3L_12015001 RAL-320 1596 chr3L 12052695 12052738 chr3L 12052802 12052846 14 107 7.0 7.0 7.0 1.8 151 chr3L 12052695 intron rols - chr3L 12052770 intron rols - chr3L 12052846 intron rols - chr3L_14_12050001 chr3L_12050001 RAL-320 1597 chr3L 12075407 12075441 chr3L 12075516 12075533 7 104 3.5 0.5 2.0 2.3 126 chr3L 12075407 intron Sema-5c - chr3L 12075470 intron Sema-5c - chr3L 12075533 intron Sema-5c - chr3L_7_12075001 chr3L_12075001 RAL-320 1598 chr3L 12089064 12089096 chr3L 12089164 12089195 22 99 8.0 5.0 6.5 2.9 131 chr3L 12089064 exon CG17154 + chr3L 12089130 3` UTR CG17154 + chr3L 12089195 3` UTR CG17154 + chr3L_22_12085001 chr3L_12085001 RAL-320 1599 chr3L 12092383 12092400 chr3L 12092480 12092496 5 97 3.5 5.0 4.2 1.0 113 chr3L 12092383 intergenic not near genes chr3L 12092440 intergenic not near genes chr3L 12092496 intergenic not near genes chr3L_5_12090001 chr3L_12090001 RAL-320 1600 chr3L 12119739 12119786 chr3L 12119855 12119903 15 114 6.0 3.5 4.8 2.6 164 chr3L 12119739 3` UTR ssp + chr3L 12119821 intergenic ssp +,CG11560 + chr3L 12119903 intergenic ssp +,CG11560 + chr3L_15_12115001 chr3L_12115001 RAL-320 1601 chr3L 12161457 12161468 chr3L 12161553 12161566 5 96 2.5 7.5 5.0 0.8 109 chr3L 12161457 intron CG9760 - chr3L 12161512 intron CG9760 - chr3L 12161566 intron CG9760 - chr3L_5_12160001 chr3L_12160001 RAL-320 1602 chr3L 12183200 12183230 chr3L 12183280 12183318 15 90 3.5 4.0 3.8 3.1 118 chr3L 12183200 3` UTR CAH2 + chr3L 12183259 3` UTR CAH2 + chr3L 12183318 3` UTR CAH2 + chr3L_15_12180001 chr3L_12180001 RAL-320 1603 chr3L 12196117 12196160 chr3L 12196384 12196423 13 265 6.5 5.5 6.0 1.9 306 chr3L 12196117 intergenic CR45746 - chr3L 12196270 intergenic CR45746 - chr3L 12196423 intergenic CR45746 - chr3L_13_12195001 chr3L_12195001 RAL-320 1604 chr3L 12304092 12304118 chr3L 12304168 12304214 12 83 6.5 7.5 7.0 1.5 122 chr3L 12304092 intergenic not near genes chr3L 12304153 intergenic not near genes chr3L 12304214 intergenic not near genes chr3L_12_12300001 chr3L_12300001 RAL-320 1605 chr3L 12312486 12312510 chr3L 12312569 12312603 10 88 4.0 5.0 4.5 1.8 117 chr3L 12312486 intergenic not near genes chr3L 12312544 intergenic not near genes chr3L 12312603 intergenic not near genes chr3L_10_12310001 chr3L_12310001 RAL-320 1606 chr3L 12369509 12369558 chr3L 12369703 12369753 5 194 3.0 0.0 1.5 2.0 244 chr3L 12369509 intron Ncc69 - chr3L 12369631 intron Ncc69 - chr3L 12369753 intron Ncc69 - chr3L_5_12365001 chr3L_12365001 RAL-320 1607 chr3L 12460308 12460342 chr3L 12460405 12460439 23 96 0.0 6.0 3.0 5.8 131 chr3L 12460308 intergenic not near genes chr3L 12460374 intergenic not near genes chr3L 12460439 intergenic not near genes chr3L_23_12460001 chr3L_12460001 RAL-320 1608 chr3L 12527093 12527136 chr3L 12527189 12527240 14 103 3.0 2.5 2.8 3.7 147 chr3L 12527093 intergenic nst -,eIF-2beta - chr3L 12527166 intergenic nst -,eIF-2beta - chr3L 12527240 3` UTR nst - chr3L_14_12525001 chr3L_12525001 RAL-320 1609 chr3L 12578060 12578076 chr3L 12578139 12578184 6 97 2.0 0.0 1.0 3.0 124 chr3L 12578060 intergenic not near genes chr3L 12578122 intergenic not near genes chr3L 12578184 intergenic not near genes chr3L_6_12575001 chr3L_12575001 RAL-320 1610 chr3L 12592986 12593024 chr3L 12593103 12593126 7 112 5.0 1.5 3.2 1.7 140 chr3L 12592986 intron ara + chr3L 12593056 intron ara + chr3L 12593126 intron ara + chr3L_7_12590001 chr3L_12590001 RAL-320 1611 chr3L 12614581 12614599 chr3L 12614739 12614757 9 158 0.0 2.5 1.2 4.1 176 chr3L 12614581 intron caup + chr3L 12614669 intron caup + chr3L 12614757 intron caup + chr3L_9_12610001 chr3L_12610001 RAL-320 1612 chr3L 12626133 12626165 chr3L 12626262 12626294 19 128 4.0 2.5 3.2 4.5 161 chr3L 12626133 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626294 intergenic not near genes chr3L_19_12625001 chr3L_12625001 RAL-320 1613 chr3L 12647931 12647966 chr3L 12648026 12648046 20 91 6.0 3.5 4.8 3.4 115 chr3L 12647931 5` UTR CR32111 + chr3L 12647988 5` UTR CR32111 + chr3L 12648046 5` UTR CR32111 + chr3L_20_12645001 chr3L_12645001 RAL-320 1614 chr3L 12682968 12682978 chr3L 12683063 12683074 4 96 8.0 9.0 8.5 0.4 106 chr3L 12682968 intergenic not near genes chr3L 12683021 intergenic not near genes chr3L 12683074 intergenic not near genes chr3L_4_12680001 chr3L_12680001 RAL-320 1615 chr3L 12682981 12683002 chr3L 12683061 12683098 10 92 4.0 9.0 6.5 1.3 117 chr3L 12682981 intergenic not near genes chr3L 12683040 intergenic not near genes chr3L 12683098 intergenic not near genes chr3L_10_12680001 chr3L_12680001 RAL-320 1616 chr3L 12689632 12689676 chr3L 12689733 12689777 12 99 1.5 3.5 2.5 3.4 145 chr3L 12689632 intergenic not near genes chr3L 12689704 intergenic not near genes chr3L 12689777 intergenic not near genes chr3L_12_12685001 chr3L_12685001 RAL-320 1617 chr3L 12720305 12720358 chr3L 12720410 12720448 30 103 6.0 2.0 4.0 6.0 143 chr3L 12720305 intergenic not near genes chr3L 12720376 intergenic not near genes chr3L 12720448 intergenic not near genes chr3L_30_12720001 chr3L_12720001 RAL-320 1618 chr3L 12801966 12802011 chr3L 12802056 12802107 17 87 3.0 3.5 3.2 4.0 141 chr3L 12801966 intron Atg1 - chr3L 12802036 intron Atg1 - chr3L 12802107 intron Atg1 - chr3L_17_12800001 chr3L_12800001 RAL-320 1619 chr3L 12815033 12815083 chr3L 12815166 12815194 6 126 5.5 3.0 4.2 1.2 161 chr3L 12815033 intron CG42588 + chr3L 12815114 intron CG42588 + chr3L 12815194 intron CG42588 + chr3L_6_12815001 chr3L_12815001 RAL-320 1620 chr3L 12857977 12857999 chr3L 12858090 12858113 6 112 2.0 2.5 2.2 1.9 136 chr3L 12857977 3` UTR CG32107 - chr3L 12858045 3` UTR CG32107 - chr3L 12858113 3` UTR CG32107 - chr3L_6_12855001 chr3L_12855001 RAL-320 1621 chr3L 12874914 12874954 chr3L 12877218 12877266 jockey 15 2311 1.5 4.5 3.0 3.8 2352 chr3L 12874914 intergenic not near genes chr3L 12876090 intergenic not near genes chr3L 12877266 intergenic not near genes chr3L_15_12875001 chr3L_12875001 RAL-320 1622 chr3L 12894803 12894820 chr3L 12894889 12894893 4 88 9.0 7.5 8.2 0.4 90 chr3L 12894803 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894893 intergenic CG14118 + chr3L_4_12890001 chr3L_12890001 RAL-320 1623 chr3L 12943854 12943864 chr3L 12943965 12943975 6 111 4.0 0.0 2.0 2.0 121 chr3L 12943854 intergenic not near genes chr3L 12943914 intergenic not near genes chr3L 12943975 intergenic not near genes chr3L_6_12940001 chr3L_12940001 RAL-320 1624 chr3L 12957796 12957808 chr3L 12962289 12962303 copia 10 4499 4.5 8.5 6.5 1.3 4507 chr3L 12957796 intergenic not near genes chr3L 12960050 intergenic not near genes chr3L 12962303 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-320 1625 chr3L 12962651 12962694 chr3L 12962787 12962807 10 126 11.5 6.5 9.0 1.0 156 chr3L 12962651 intergenic not near genes chr3L 12962729 intergenic not near genes chr3L 12962807 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-320 1626 chr3L 13017901 13017918 chr3L 13018003 13018020 7 100 1.0 7.0 4.0 1.4 119 chr3L 13017901 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017960 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018020 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_7_13015001 chr3L_13015001 RAL-320 1627 chr3L 13085033 13085086 chr3L 13085132 13085185 14 99 2.0 4.5 3.2 3.3 152 chr3L 13085033 intergenic not near genes chr3L 13085109 intergenic not near genes chr3L 13085185 intergenic not near genes chr3L_14_13085001 chr3L_13085001 RAL-320 1628 chr3L 13090859 13090912 chr3L 13090990 13091043 13 126 3.5 5.5 4.5 2.4 184 chr3L 13090859 intergenic not near genes chr3L 13090951 intergenic not near genes chr3L 13091043 intergenic not near genes chr3L_13_13090001 chr3L_13090001 RAL-320 1629 chr3L 13267275 13267316 chr3L 13267403 13267446 13 130 5.0 7.0 6.0 1.9 171 chr3L 13267275 intron caps + chr3L 13267360 intron caps + chr3L 13267446 intron caps + chr3L_13_13265001 chr3L_13265001 RAL-320 1630 chr3L 13296504 13296541 chr3L 13296615 13296637 11 110 7.5 6.0 6.8 1.4 133 chr3L 13296504 intergenic Sfp70A4 -,CR45253 + chr3L 13296570 3` UTR Sfp70A4 - chr3L 13296637 3` UTR Sfp70A4 - chr3L_11_13295001 chr3L_13295001 RAL-320 1631 chr3L 13383760 13383798 chr3L 13383853 13383898 9 97 4.0 9.5 6.8 1.2 138 chr3L 13383760 exon ImpL1 + chr3L 13383829 exon ImpL1 + chr3L 13383898 exon ImpL1 + chr3L_9_13380001 chr3L_13380001 RAL-320 1632 chr3L 13400521 13400546 chr3L 13400607 13400642 9 95 2.5 5.5 4.0 1.8 121 chr3L 13400521 intron sens - chr3L 13400582 intron sens - chr3L 13400642 intron sens - chr3L_9_13400001 chr3L_13400001 RAL-320 1633 chr3L 13525139 13525179 chr3L 13532955 13532969 roo 7 7809 6.0 6.0 6.0 1.0 7830 chr3L 13525139 intergenic not near genes chr3L 13529054 intergenic not near genes chr3L 13532969 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-320 1634 chr3L 13525185 13525190 chr3L 13532950 13532974 roo 4 7792 4.0 5.5 4.8 0.7 7789 chr3L 13525185 intergenic not near genes chr3L 13529080 intergenic not near genes chr3L 13532974 intergenic not near genes chr3L_4_13525001 chr3L_13525001 RAL-320 1635 chr3L 13535888 13535935 chr3L 13535976 13536031 9 91 1.0 4.0 2.5 2.6 143 chr3L 13535888 intergenic not near genes chr3L 13535960 intergenic not near genes chr3L 13536031 intergenic not near genes chr3L_9_13535001 chr3L_13535001 RAL-320 1636 chr3L 13559952 13559996 chr3L 13560053 13560100 17 103 3.5 6.5 5.0 2.8 148 chr3L 13559952 intron bru-3 - chr3L 13560026 intron bru-3 - chr3L 13560100 intron bru-3 - chr3L_17_13560001 chr3L_13560001 RAL-320 1637 chr3L 13574607 13574618 chr3L 13580138 13580149 Rt1c 4 5531 4.5 6.5 5.5 0.6 5542 chr3L 13574607 intron bru-3 - chr3L 13577378 intron bru-3 - chr3L 13580149 intron bru-3 - chr3L_4_13575001 chr3L_13575001 RAL-320 1638 chr3L 13629509 13629546 chr3L 13629640 13629677 9 127 3.5 8.5 6.0 1.3 168 chr3L 13629509 intron bru-3 - chr3L 13629593 intron bru-3 - chr3L 13629677 intron bru-3 - chr3L_9_13625001 chr3L_13625001 RAL-320 1639 chr3L 13677514 13677560 chr3L 13677611 13677657 15 96 5.0 5.0 5.0 2.5 143 chr3L 13677514 intron bru-3 - chr3L 13677586 intron bru-3 - chr3L 13677657 intron bru-3 - chr3L_15_13675001 chr3L_13675001 RAL-320 1640 chr3L 13745273 13745290 chr3L 13745381 13745399 6 108 6.5 0.0 3.2 1.4 126 chr3L 13745273 intron bru-3 - chr3L 13745336 intron bru-3 - chr3L 13745399 intron bru-3 - chr3L_6_13745001 chr3L_13745001 RAL-320 1641 chr3L 13804535 13804571 chr3L 13822841 13822847 roo 6 18299 4.5 11.0 7.8 0.7 18312 chr3L 13804535 intergenic not near genes chr3L 13813691 intergenic not near genes chr3L 13822847 intergenic not near genes chr3L_6_13810001 chr3L_13810001 RAL-320 1642 chr3L 13833957 13833990 chr3L 13834087 13834123 7 130 8.5 5.5 7.0 0.9 166 chr3L 13833957 intergenic not near genes chr3L 13834040 intergenic not near genes chr3L 13834123 intergenic not near genes chr3L_7_13830001 chr3L_13830001 RAL-320 1643 chr3L 13833996 13834007 chr3L 13834086 13834141 5 123 3.5 5.0 4.2 1.0 145 chr3L 13833996 intergenic not near genes chr3L 13834068 intergenic not near genes chr3L 13834141 intergenic not near genes chr3L_5_13830001 chr3L_13830001 RAL-320 1644 chr3L 13838916 13838961 chr3L 13839155 13839200 15 236 3.5 3.5 3.5 3.3 284 chr3L 13838916 intergenic not near genes chr3L 13839058 intergenic not near genes chr3L 13839200 intergenic not near genes chr3L_15_13835001 chr3L_13835001 RAL-320 1645 chr3L 13884364 13884381 chr3L 13884475 13884492 5 111 10.0 9.0 9.5 0.5 128 chr3L 13884364 intron dysc - chr3L 13884428 intron dysc - chr3L 13884492 intron dysc - chr3L_5_13880001 chr3L_13880001 RAL-320 1646 chr3L 13920399 13920433 chr3L 13920499 13920533 10 98 4.0 2.5 3.2 2.4 134 chr3L 13920399 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920533 intron Rgl - chr3L_10_13920001 chr3L_13920001 RAL-320 1647 chr3L 14036654 14036701 chr3L 14036767 14036811 14 111 1.5 3.0 2.2 4.4 157 chr3L 14036654 3` UTR,exon pncr014:3L -,CG6661 + chr3L 14036732 3` UTR,3` UTR pncr014:3L -,CG6661 + chr3L 14036811 3` UTR pncr014:3L - chr3L_14_14035001 chr3L_14035001 RAL-320 1648 chr3L 14092719 14092753 chr3L 14092822 14092835 11 99 5.5 1.0 3.2 2.6 116 chr3L 14092719 intergenic not near genes chr3L 14092777 intergenic not near genes chr3L 14092835 intergenic not near genes chr3L_11_14090001 chr3L_14090001 RAL-320 1649 chr3L 14099412 14099440 chr3L 14099522 14099550 14 109 1.5 5.5 3.5 3.1 138 chr3L 14099412 intergenic not near genes chr3L 14099481 intergenic not near genes chr3L 14099550 intergenic not near genes chr3L_14_14095001 chr3L_14095001 RAL-320 1650 chr3L 14141392 14141412 chr3L 14141499 14141519 5 107 0.5 0.0 0.2 4.2 127 chr3L 14141392 intergenic not near genes chr3L 14141456 intergenic not near genes chr3L 14141519 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-320 1651 chr3L 14185141 14185185 chr3L 14185232 14185269 10 85 3.0 4.5 3.8 2.1 128 chr3L 14185141 intergenic not near genes chr3L 14185205 intergenic not near genes chr3L 14185269 intergenic not near genes chr3L_10_14185001 chr3L_14185001 RAL-320 1652 chr3L 14194706 14194737 chr3L 14194802 14194833 10 93 4.0 6.0 5.0 1.7 127 chr3L 14194706 intron nuf + chr3L 14194770 intron nuf + chr3L 14194833 intron nuf + chr3L_10_14190001 chr3L_14190001 RAL-320 1653 chr3L 14207208 14207240 chr3L 14207306 14207348 18 107 7.5 4.5 6.0 2.6 140 chr3L 14207208 intron nuf + chr3L 14207278 intron nuf + chr3L 14207348 intron nuf + chr3L_18_14205001 chr3L_14205001 RAL-320 1654 chr3L 14211418 14211465 chr3L 14211516 14211542 15 93 3.5 3.0 3.2 3.6 124 chr3L 14211418 intron nuf + chr3L 14211480 intron nuf + chr3L 14211542 intron nuf + chr3L_15_14210001 chr3L_14210001 RAL-320 1655 chr3L 14212231 14212244 chr3L 14212338 14212351 4 107 4.5 0.0 2.2 1.2 120 chr3L 14212231 exon nuf + chr3L 14212291 intron nuf + chr3L 14212351 intron nuf + chr3L_4_14210001 chr3L_14210001 RAL-320 1656 chr3L 14212247 14212259 chr3L 14212332 14212366 6 98 1.0 0.0 0.5 4.0 119 chr3L 14212247 intron nuf + chr3L 14212306 intron nuf + chr3L 14212366 intron nuf + chr3L_6_14210001 chr3L_14210001 RAL-320 1657 chr3L 14245550 14245574 chr3L 14245664 14245669 5 108 4.5 6.0 5.2 0.8 119 chr3L 14245550 3` UTR CR44561 - chr3L 14245610 3` UTR CR44561 - chr3L 14245669 3` UTR CR44561 - chr3L_5_14245001 chr3L_14245001 RAL-320 1658 chr3L 14245580 14245589 chr3L 14245659 14245689 1360 5 101 3.5 6.0 4.8 0.9 109 chr3L 14245580 3` UTR CR44561 - chr3L 14245634 3` UTR CR44561 - chr3L 14245689 3` UTR CR44561 - chr3L_5_14245001 chr3L_14245001 RAL-320 1659 chr3L 14267352 14267368 chr3L 14271813 14271829 F-element 4 4461 10.0 7.0 8.5 0.4 4477 chr3L 14267352 intergenic not near genes chr3L 14269590 intergenic not near genes chr3L 14271829 intergenic not near genes chr3L_4_14265001 chr3L_14265001 RAL-320 1660 chr3L 14267370 14267389 chr3L 14271811 14271850 F-element 9 4454 6.0 6.5 6.2 1.2 4480 chr3L 14267370 intergenic not near genes chr3L 14269610 intergenic not near genes chr3L 14271850 intergenic not near genes chr3L_9_14265001 chr3L_14265001 RAL-320 1661 chr3L 14286178 14286202 chr3L 14286255 14286300 7 89 1.5 3.5 2.5 2.0 122 chr3L 14286178 intron fz + chr3L 14286239 intron fz + chr3L 14286300 intron fz + chr3L_7_14285001 chr3L_14285001 RAL-320 1662 chr3L 14295965 14296009 chr3L 14296471 14296515 roo 9 505 3.5 9.0 6.2 1.2 550 chr3L 14295965 intron fz + chr3L 14296240 intron fz + chr3L 14296515 intron fz + chr3L_9_14295001 chr3L_14295001 RAL-320 1663 chr3L 14302984 14303003 chr3L 14303074 14303096 9 98 3.5 0.5 2.0 3.0 112 chr3L 14302984 intron fz + chr3L 14303040 intron fz + chr3L 14303096 intron fz + chr3L_9_14300001 chr3L_14300001 RAL-320 1664 chr3L 14303480 14303496 chr3L 14303621 14303631 7 139 0.5 5.5 3.0 1.8 151 chr3L 14303480 intron fz + chr3L 14303556 intron fz + chr3L 14303631 intron fz + chr3L_7_14300001 chr3L_14300001 RAL-320 1665 chr3L 14312026 14312055 chr3L 14316837 14316854 X-element 5 4809 1.5 3.5 2.5 1.4 4828 chr3L 14312026 exon fz + chr3L 14314440 intron fz + chr3L 14316854 intron fz + chr3L_5_14310001 chr3L_14310001 RAL-320 1666 chr3L 14331439 14331487 chr3L 14331542 14331590 11 97 4.5 3.5 4.0 2.2 151 chr3L 14331439 intron fz + chr3L 14331514 intron fz + chr3L 14331590 intron fz + chr3L_11_14330001 chr3L_14330001 RAL-320 1667 chr3L 14341404 14341438 chr3L 14341548 14341593 9 152 0.0 1.5 0.8 5.0 189 chr3L 14341404 intron fz + chr3L 14341498 intron fz + chr3L 14341593 intron fz + chr3L_9_14340001 chr3L_14340001 RAL-320 1668 chr3L 14356499 14356547 chr3L 14356599 14356640 16 96 3.0 1.5 2.2 5.0 141 chr3L 14356499 intron fz + chr3L 14356570 intron fz + chr3L 14356640 intron fz + chr3L_16_14355001 chr3L_14355001 RAL-320 1669 chr3L 14359996 14360029 chr3L 14360216 14360249 10 224 3.5 2.0 2.8 2.6 253 chr3L 14359996 intron fz + chr3L 14360122 intron fz + chr3L 14360249 intron fz + chr3L_10_14360001 chr3L_14360001 RAL-320 1670 chr3L 14392185 14392231 chr3L 14392287 14392335 10 100 0.0 0.0 0.0 10.0 150 chr3L 14392185 intergenic not near genes chr3L 14392260 intergenic not near genes chr3L 14392335 intergenic not near genes chr3L_10_14390001 chr3L_14390001 RAL-320 1671 chr3L 14444709 14444748 chr3L 14444896 14444917 8 182 1.0 9.0 5.0 1.3 208 chr3L 14444709 intron bbg - chr3L 14444813 intron bbg - chr3L 14444917 intron bbg - chr3L_8_14440001 chr3L_14440001 RAL-320 1672 chr3L 14455345 14455396 chr3L 14455446 14455495 9 98 4.0 0.0 2.0 3.0 150 chr3L 14455345 intron bbg - chr3L 14455420 intron bbg - chr3L 14455495 intron bbg - chr3L_9_14455001 chr3L_14455001 RAL-320 1673 chr3L 14468429 14468477 chr3L 14473655 14473703 copia 15 5226 3.5 5.0 4.2 2.9 5274 chr3L 14468429 intron bbg - chr3L 14471066 intron bbg - chr3L 14473703 intron bbg - chr3L_15_14470001 chr3L_14470001 RAL-320 1674 chr3L 14486134 14486168 chr3L 14486231 14486265 7 95 2.0 14.5 8.2 0.8 131 chr3L 14486134 intron bbg - chr3L 14486200 intron bbg - chr3L 14486265 intron bbg - chr3L_7_14485001 chr3L_14485001 RAL-320 1675 chr3L 14505306 14505342 chr3L 14505656 14505662 14 347 8.5 0.0 4.2 2.7 356 chr3L 14505306 intron bbg - chr3L 14505484 intron bbg - chr3L 14505662 intron bbg - chr3L_14_14505001 chr3L_14505001 RAL-320 1676 chr3L 14510192 14510229 chr3L 14510433 14510463 8 240 1.5 9.0 5.2 1.3 271 chr3L 14510192 intron bbg - chr3L 14510328 intron bbg - chr3L 14510463 intron bbg - chr3L_8_14510001 chr3L_14510001 RAL-320 1677 chr3L 14522088 14522128 chr3L 14522199 14522246 6 118 1.5 3.5 2.5 1.7 158 chr3L 14522088 intron bbg - chr3L 14522167 intron bbg - chr3L 14522246 intron bbg - chr3L_6_14520001 chr3L_14520001 RAL-320 1678 chr3L 14546807 14546817 chr3L 14546928 14546938 6 120 0.0 7.5 3.8 1.2 131 chr3L 14546807 intron CG9238 - chr3L 14546872 intron CG9238 - chr3L 14546938 intron CG9238 - chr3L_6_14545001 chr3L_14545001 RAL-320 1679 chr3L 14627190 14627217 chr3L 14627297 14627324 4 106 3.5 4.0 3.8 0.8 134 chr3L 14627190 intron CG9628 + chr3L 14627257 intron CG9628 + chr3L 14627324 intron CG9628 + chr3L_4_14625001 chr3L_14625001 RAL-320 1680 chr3L 14680408 14680454 chr3L 14680522 14680545 17 105 3.5 6.0 4.8 2.9 137 chr3L 14680408 exon ome + chr3L 14680476 exon ome + chr3L 14680545 exon ome + chr3L_17_14680001 chr3L_14680001 RAL-320 1681 chr3L 14721173 14721208 chr3L 14723026 14723044 Rt1c 12 1850 10.0 4.5 7.2 1.5 1871 chr3L 14721173 intron ome + chr3L 14722108 intron ome + chr3L 14723044 intron ome + chr3L_12_14720001 chr3L_14720001 RAL-320 1682 chr3L 14741124 14741169 chr3L 14741221 14741232 8 89 6.5 7.0 6.8 1.0 108 chr3L 14741124 intron ome + chr3L 14741178 intron ome + chr3L 14741232 intron ome + chr3L_8_14740001 chr3L_14740001 RAL-320 1683 chr3L 14809167 14809217 chr3L 14809268 14809318 17 97 4.0 0.5 2.2 5.3 151 chr3L 14809167 intron CG17839 + chr3L 14809242 intron CG17839 + chr3L 14809318 intron CG17839 + chr3L_17_14805001 chr3L_14805001 RAL-320 1684 chr3L 14839033 14839049 chr3L 14839128 14839158 8 105 2.0 4.0 3.0 2.0 125 chr3L 14839033 intron CG17839 + chr3L 14839096 intron CG17839 + chr3L 14839158 intron CG17839 + chr3L_8_14835001 chr3L_14835001 RAL-320 1685 chr3L 14866817 14866833 chr3L 14866923 14866938 10 110 2.5 7.5 5.0 1.7 121 chr3L 14866817 exon CG17839 + chr3L 14866878 intron CG17839 + chr3L 14866938 intron CG17839 + chr3L_10_14865001 chr3L_14865001 RAL-320 1686 chr3L 14933428 14933445 chr3L 14933530 14933547 8 101 5.5 7.0 6.2 1.1 119 chr3L 14933428 intron DCX-EMAP + chr3L 14933488 intron DCX-EMAP + chr3L 14933547 intron DCX-EMAP + chr3L_8_14930001 chr3L_14930001 RAL-320 1687 chr3L 14970748 14970761 chr3L 14971078 14971091 F-element 5 330 4.5 5.0 4.8 0.9 343 chr3L 14970748 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971091 intergenic not near genes chr3L_5_14970001 chr3L_14970001 RAL-320 1688 chr3L 14973626 14973662 chr3L 14973726 14973762 7 94 4.5 5.5 5.0 1.2 136 chr3L 14973626 intergenic Brd + chr3L 14973694 intergenic Brd + chr3L 14973762 intergenic not near genes chr3L_7_14970001 chr3L_14970001 RAL-320 1689 chr3L 15035235 15035273 chr3L 15035377 15035414 11 139 3.0 8.0 5.5 1.7 179 chr3L 15035235 intron Sytbeta - chr3L 15035324 intron Sytbeta - chr3L 15035414 intron Sytbeta - chr3L_11_15035001 chr3L_15035001 RAL-320 1690 chr3L 15062160 15062192 chr3L 15062274 15062306 15 114 6.5 7.5 7.0 1.9 146 chr3L 15062160 intron Sytbeta - chr3L 15062233 intron,3` UTR Sytbeta -,CR43684 - chr3L 15062306 intron,3` UTR Sytbeta -,CR43684 - chr3L_15_15060001 chr3L_15060001 RAL-320 1691 chr3L 15085030 15085078 chr3L 15086216 15086264 1360 20 1184 6.0 7.0 6.5 2.7 1234 chr3L 15085030 intron cp309 - chr3L 15085647 intron cp309 - chr3L 15086264 intron cp309 - chr3L_20_15085001 chr3L_15085001 RAL-320 1692 chr3L 15193680 15193724 chr3L 15193863 15193913 16 186 6.5 5.5 6.0 2.3 233 chr3L 15193680 intergenic not near genes chr3L 15193796 intergenic not near genes chr3L 15193913 intergenic not near genes chr3L_16_15190001 chr3L_15190001 RAL-320 1693 chr3L 15219754 15219774 chr3L 15219856 15219876 9 102 3.5 7.5 5.5 1.4 122 chr3L 15219754 intergenic not near genes chr3L 15219815 intergenic not near genes chr3L 15219876 intergenic not near genes chr3L_9_15215001 chr3L_15215001 RAL-320 1694 chr3L 15257413 15257424 chr3L 15257646 15257657 4 233 7.0 5.5 6.2 0.6 244 chr3L 15257413 intergenic not near genes chr3L 15257535 intergenic not near genes chr3L 15257657 intergenic not near genes chr3L_4_15255001 chr3L_15255001 RAL-320 1695 chr3L 15264041 15264078 chr3L 15264137 15264175 4 96 0.5 3.0 1.8 1.4 134 chr3L 15264041 intergenic not near genes chr3L 15264108 intergenic not near genes chr3L 15264175 intergenic not near genes chr3L_4_15260001 chr3L_15260001 RAL-320 1696 chr3L 15282700 15282730 chr3L 15282845 15282872 10 148 8.5 3.0 5.8 1.5 172 chr3L 15282700 intergenic not near genes chr3L 15282786 intergenic not near genes chr3L 15282872 intergenic not near genes chr3L_10_15280001 chr3L_15280001 RAL-320 1697 chr3L 15284549 15284577 chr3L 15284648 15284671 7 94 11.5 7.0 9.2 0.7 122 chr3L 15284549 intergenic not near genes chr3L 15284610 intergenic not near genes chr3L 15284671 intergenic not near genes chr3L_7_15280001 chr3L_15280001 RAL-320 1698 chr3L 15284583 15284598 chr3L 15284645 15284665 4 74 8.5 7.0 7.8 0.5 82 chr3L 15284583 intergenic not near genes chr3L 15284624 intergenic not near genes chr3L 15284665 intergenic not near genes chr3L_4_15280001 chr3L_15280001 RAL-320 1699 chr3L 15291455 15291488 chr3L 15291561 15291594 12 104 4.5 5.5 5.0 2.0 139 chr3L 15291455 intergenic not near genes chr3L 15291524 intergenic not near genes chr3L 15291594 intergenic not near genes chr3L_12_15290001 chr3L_15290001 RAL-320 1700 chr3L 15295746 15295780 chr3L 15298609 15298643 gypsy5 5 2863 4.0 4.0 4.0 1.0 2897 chr3L 15295746 intergenic not near genes chr3L 15297194 intergenic not near genes chr3L 15298643 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 RAL-320 1701 chr3L 15333122 15333169 chr3L 15333222 15333264 10 95 1.5 4.0 2.8 2.6 142 chr3L 15333122 intergenic CR43247 + chr3L 15333193 intergenic CR43247 + chr3L 15333264 intergenic CR43247 + chr3L_10_15330001 chr3L_15330001 RAL-320 1702 chr3L 15406008 15406055 chr3L 15406110 15406118 7 91 3.5 5.5 4.5 1.3 110 chr3L 15406008 intergenic not near genes chr3L 15406063 intergenic not near genes chr3L 15406118 intergenic not near genes chr3L_7_15405001 chr3L_15405001 RAL-320 1703 chr3L 15423740 15423782 chr3L 15426604 15426646 opus 10 2862 8.5 3.5 6.0 1.4 2906 chr3L 15423740 intergenic not near genes chr3L 15425193 intergenic not near genes chr3L 15426646 intergenic not near genes chr3L_10_15425001 chr3L_15425001 RAL-320 1704 chr3L 15444644 15444682 chr3L 15444748 15444794 8 110 7.5 7.0 7.2 1.0 150 chr3L 15444644 intergenic not near genes chr3L 15444719 intergenic not near genes chr3L 15444794 intergenic not near genes chr3L_8_15440001 chr3L_15440001 RAL-320 1705 chr3L 15463472 15463485 chr3L 15463552 15463595 8 104 8.0 4.0 6.0 1.1 123 chr3L 15463472 intergenic not near genes chr3L 15463534 intergenic not near genes chr3L 15463595 intergenic not near genes chr3L_8_15460001 chr3L_15460001 RAL-320 1706 chr3L 15466017 15466139 chr3L 15466119 15466245 12 105 0.0 0.0 0.0 12.0 228 chr3L 15466017 intergenic not near genes chr3L 15466131 intergenic not near genes chr3L 15466245 intergenic not near genes chr3L_12_15465001 chr3L_15465001 RAL-320 1707 chr3L 15541605 15541652 chr3L 15541716 15541763 10 111 3.5 1.5 2.5 2.9 158 chr3L 15541605 intron CrebA + chr3L 15541684 intron CrebA + chr3L 15541763 intron CrebA + chr3L_10_15540001 chr3L_15540001 RAL-320 1708 chr3L 15554902 15554951 chr3L 15556709 15556758 S-element 18 1805 4.0 7.5 5.8 2.6 1856 chr3L 15554902 intron AGO2 + chr3L 15555830 intron AGO2 + chr3L 15556758 intron AGO2 + chr3L_18_15555001 chr3L_15555001 RAL-320 1709 chr3L 15629880 15629910 chr3L 15630024 15630054 17 142 5.5 4.5 5.0 2.8 174 chr3L 15629880 intron comm3 - chr3L 15629967 intron comm3 - chr3L 15630054 intron comm3 - chr3L_17_15625001 chr3L_15625001 RAL-320 1710 chr3L 15658648 15658665 chr3L 15658839 15658855 6 189 9.5 5.5 7.5 0.7 207 chr3L 15658648 intergenic Eig71Eh -,Eig71Eg + chr3L 15658752 intergenic Eig71Eh - chr3L 15658855 intergenic Eig71Eh - chr3L_6_15655001 chr3L_15655001 RAL-320 1711 chr3L 15756860 15756908 chr3L 15756963 15756971 7 87 4.0 0.0 2.0 2.3 111 chr3L 15756860 intergenic not near genes chr3L 15756916 intergenic not near genes chr3L 15756971 intergenic not near genes chr3L_7_15755001 chr3L_15755001 RAL-320 1712 chr3L 15775815 15775863 chr3L 15775910 15775960 15 91 5.0 5.5 5.2 2.4 145 chr3L 15775815 intergenic not near genes chr3L 15775888 intergenic not near genes chr3L 15775960 intergenic not near genes chr3L_15_15775001 chr3L_15775001 RAL-320 1713 chr3L 15843043 15843047 chr3L 15843205 15843209 4 162 0.0 7.0 3.5 0.9 166 chr3L 15843043 intron CG32150 - chr3L 15843126 intron CG32150 - chr3L 15843209 intron CG32150 - chr3L_4_15840001 chr3L_15840001 RAL-320 1714 chr3L 15883176 15883219 chr3L 15883489 15883532 13 312 4.5 3.0 3.8 2.7 356 chr3L 15883176 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883532 intron pHCl - chr3L_13_15880001 chr3L_15880001 RAL-320 1715 chr3L 15916825 15916859 chr3L 15916922 15916955 11 95 3.5 2.5 3.0 2.8 130 chr3L 15916825 intron sff - chr3L 15916890 intron sff - chr3L 15916955 intron sff - chr3L_11_15915001 chr3L_15915001 RAL-320 1716 chr3L 15981662 15981687 chr3L 15981768 15981793 9 106 8.0 5.5 6.8 1.2 131 chr3L 15981662 intron,3` UTR brm -,CG17027 + chr3L 15981728 intron,3` UTR brm -,CG17027 + chr3L 15981793 intron,3` UTR brm -,CG17027 + chr3L_9_15980001 chr3L_15980001 RAL-320 1717 chr3L 16145760 16145788 chr3L 16145887 16145915 9 127 0.0 8.5 4.2 1.7 155 chr3L 16145760 intron CG5151 - chr3L 16145838 intron CG5151 - chr3L 16145915 intron CG5151 - chr3L_9_16145001 chr3L_16145001 RAL-320 1718 chr3L 16158805 16158826 chr3L 16158910 16158931 11 104 2.5 8.0 5.2 1.8 126 chr3L 16158805 intron CG5151 - chr3L 16158868 intron CG5151 - chr3L 16158931 intron CG5151 - chr3L_11_16155001 chr3L_16155001 RAL-320 1719 chr3L 16173763 16173788 chr3L 16173869 16173890 6 107 0.5 9.0 4.8 1.0 127 chr3L 16173763 intergenic not near genes chr3L 16173826 intergenic not near genes chr3L 16173890 intergenic not near genes chr3L_6_16170001 chr3L_16170001 RAL-320 1720 chr3L 16184088 16184139 chr3L 16188927 16188948 X-element 21 4829 5.5 2.5 4.0 4.2 4860 chr3L 16184088 intergenic not near genes chr3L 16186518 intergenic not near genes chr3L 16188948 intergenic not near genes chr3L_21_16185001 chr3L_16185001 RAL-320 1721 chr3L 16212790 16212839 chr3L 16212901 16212945 20 109 7.5 0.5 4.0 4.0 155 chr3L 16212790 intergenic CG13073 - chr3L 16212868 intergenic CG13073 - chr3L 16212945 intergenic CG13073 - chr3L_20_16210001 chr3L_16210001 RAL-320 1722 chr3L 16239918 16239946 chr3L 16240014 16240027 15 92 5.5 3.5 4.5 2.7 109 chr3L 16239918 intergenic l(3)72Dr + chr3L 16239972 intergenic not near genes chr3L 16240027 intergenic not near genes chr3L_15_16235001 chr3L_16235001 RAL-320 1723 chr3L 16243649 16243679 chr3L 16243760 16243790 8 108 0.5 5.0 2.8 2.1 141 chr3L 16243649 intergenic not near genes chr3L 16243720 intergenic not near genes chr3L 16243790 intergenic not near genes chr3L_8_16240001 chr3L_16240001 RAL-320 1724 chr3L 16322831 16322856 chr3L 16322921 16322940 7 99 7.0 5.0 6.0 1.0 109 chr3L 16322831 intergenic not near genes chr3L 16322886 intergenic not near genes chr3L 16322940 intergenic not near genes chr3L_7_16320001 chr3L_16320001 RAL-320 1725 chr3L 16359940 16359942 chr3L 16360045 16360048 4 106 12.5 4.5 8.5 0.4 108 chr3L 16359940 intron CG45057 - chr3L 16359994 intron CG45057 - chr3L 16360048 intron CG45057 - chr3L_4_16355001 chr3L_16355001 RAL-320 1726 chr3L 16359953 16359993 chr3L 16360043 16360044 12 91 3.5 4.0 3.8 2.5 91 chr3L 16359953 intron CG45057 - chr3L 16359998 intron CG45057 - chr3L 16360044 intron CG45057 - chr3L_12_16360001 chr3L_16360001 RAL-320 1727 chr3L 16443833 16443873 chr3L 16446193 16446232 Doc 13 2357 4.5 8.5 6.5 1.7 2399 chr3L 16443833 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446232 intron,intron CG33158 +,dsx-c73A - chr3L_13_16445001 chr3L_16445001 RAL-320 1728 chr3L 16457508 16457550 chr3L 16457624 16457664 8 114 4.0 4.5 4.2 1.5 156 chr3L 16457508 intron CG33158 + chr3L 16457586 intron CG33158 + chr3L 16457664 intron CG33158 + chr3L_8_16455001 chr3L_16455001 RAL-320 1729 chr3L 16489856 16489867 chr3L 16489960 16489971 5 104 3.5 0.5 2.0 1.7 115 chr3L 16489856 intron CG33158 + chr3L 16489914 intron CG33158 + chr3L 16489971 intron CG33158 + chr3L_5_16485001 chr3L_16485001 RAL-320 1730 chr3L 16493958 16493997 chr3L 16494495 16494525 jockey 11 535 7.0 7.0 7.0 1.4 567 chr3L 16493958 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494525 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_11_16490001 chr3L_16490001 RAL-320 1731 chr3L 16494000 16494010 chr3L 16494492 16494527 jockey 6 518 5.0 6.0 5.5 0.9 527 chr3L 16494000 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494264 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494527 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_6_16490001 chr3L_16490001 RAL-320 1732 chr3L 16495408 16495451 chr3L 16495518 16495561 10 95 2.0 5.0 3.5 2.2 153 chr3L 16495408 intron,5` UTR,intron CG33158 +,CG42514 -,CG43373 - chr3L 16495484 intron,5` UTR,intron CG33158 +,CG42514 -,CG43373 - chr3L 16495561 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_10_16495001 chr3L_16495001 RAL-320 1733 chr3L 16513969 16514012 chr3L 16514123 16514159 15 148 4.5 5.0 4.8 2.6 190 chr3L 16513969 intron CG43373 - chr3L 16514064 intron CG43373 - chr3L 16514159 intron CG43373 - chr3L_15_16510001 chr3L_16510001 RAL-320 1734 chr3L 16514546 16514592 chr3L 16514664 16514709 14 116 2.0 6.0 4.0 2.8 163 chr3L 16514546 intron CG43373 - chr3L 16514628 intron CG43373 - chr3L 16514709 intron CG43373 - chr3L_14_16510001 chr3L_16510001 RAL-320 1735 chr3L 16540040 16540073 chr3L 16540148 16540181 14 106 4.0 7.0 5.5 2.2 141 chr3L 16540040 intron CG43373 - chr3L 16540110 intron CG43373 - chr3L 16540181 intron CG43373 - chr3L_14_16540001 chr3L_16540001 RAL-320 1736 chr3L 16540076 16540087 chr3L 16540143 16540195 8 94 2.0 5.5 3.8 1.7 119 chr3L 16540076 intron CG43373 - chr3L 16540136 intron CG43373 - chr3L 16540195 intron CG43373 - chr3L_8_16540001 chr3L_16540001 RAL-320 1737 chr3L 16563217 16563244 chr3L 16563318 16563333 9 98 6.0 0.0 3.0 2.2 116 chr3L 16563217 intergenic Mipp1 - chr3L 16563275 intergenic Mipp1 - chr3L 16563333 intergenic Mipp1 - chr3L_9_16560001 chr3L_16560001 RAL-320 1738 chr3L 16616491 16616543 chr3L 16621839 16621891 297 17 5343 4.0 1.5 2.8 4.5 5400 chr3L 16616491 3` UTR Abl - chr3L 16619191 3` UTR Abl - chr3L 16621891 3` UTR Abl - chr3L_17_16615001 chr3L_16615001 RAL-320 1739 chr3L 16638751 16638799 chr3L 16638851 16638899 16 98 3.0 3.5 3.2 3.8 148 chr3L 16638751 intron Abl - chr3L 16638825 intron Abl - chr3L 16638899 intron Abl - chr3L_16_16635001 chr3L_16635001 RAL-320 1740 chr3L 16645128 16645169 chr3L 16645229 16645270 11 100 4.0 4.0 4.0 2.2 142 chr3L 16645128 intron Abl - chr3L 16645199 intron Abl - chr3L 16645270 intron Abl - chr3L_11_16645001 chr3L_16645001 RAL-320 1741 chr3L 16659095 16659128 chr3L 16659181 16659226 13 93 3.0 3.5 3.2 3.1 131 chr3L 16659095 intron Baldspot - chr3L 16659160 intron Baldspot - chr3L 16659226 intron Baldspot - chr3L_13_16655001 chr3L_16655001 RAL-320 1742 chr3L 16684003 16684042 chr3L 16689244 16689283 copia 14 5241 4.0 3.5 3.8 2.9 5280 chr3L 16684003 intron,intron Lasp -,CG43954 - chr3L 16686643 intron,intron Lasp -,CG43954 - chr3L 16689283 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_14_16685001 chr3L_16685001 RAL-320 1743 chr3L 16700005 16700034 chr3L 16700100 16700123 15 104 3.5 0.0 1.8 5.4 118 chr3L 16700005 intron,intron Lasp -,CG43954 - chr3L 16700064 intron,intron Lasp -,CG43954 - chr3L 16700123 intron,intron Lasp -,CG43954 - chr3L_15_16700001 chr3L_16700001 RAL-320 1744 chr3L 16708509 16708549 chr3L 16708633 16708678 15 130 1.5 1.5 1.5 6.0 169 chr3L 16708509 intron,intron Lasp -,CG43954 - chr3L 16708594 intron,intron Lasp -,CG43954 - chr3L 16708678 intron,intron Lasp -,CG43954 - chr3L_15_16705001 chr3L_16705001 RAL-320 1745 chr3L 16728083 16728108 chr3L 16728188 16728214 5 108 6.5 0.0 3.2 1.2 131 chr3L 16728083 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728148 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728214 intergenic PGRP-SB1 -,Dbp73D - chr3L_5_16725001 chr3L_16725001 RAL-320 1746 chr3L 16739354 16739404 chr3L 16739473 16739516 4 116 0.0 1.0 0.5 2.7 162 chr3L 16739354 3` UTR CG9701 + chr3L 16739435 intergenic CG9701 + chr3L 16739516 intergenic CG9701 + chr3L_4_16735001 chr3L_16735001 RAL-320 1747 chr3L 16743933 16743976 chr3L 16744062 16744105 6 132 4.5 2.0 3.2 1.4 172 chr3L 16743933 intergenic not near genes chr3L 16744019 intergenic not near genes chr3L 16744105 intergenic not near genes chr3L_6_16740001 chr3L_16740001 RAL-320 1748 chr3L 16757625 16757668 chr3L 16757735 16757778 17 110 5.5 3.5 4.5 3.1 153 chr3L 16757625 intergenic not near genes chr3L 16757702 intergenic not near genes chr3L 16757778 intergenic not near genes chr3L_17_16755001 chr3L_16755001 RAL-320 1749 chr3L 16764578 16764609 chr3L 16764705 16764736 10 124 5.0 1.5 3.2 2.4 158 chr3L 16764578 intergenic not near genes chr3L 16764657 intergenic not near genes chr3L 16764736 intergenic not near genes chr3L_10_16760001 chr3L_16760001 RAL-320 1750 chr3L 16799261 16799284 chr3L 16799358 16799381 8 96 3.0 5.5 4.2 1.5 120 chr3L 16799261 intron CG9674 - chr3L 16799321 intron CG9674 - chr3L 16799381 intron CG9674 - chr3L_8_16795001 chr3L_16795001 RAL-320 1751 chr3L 16814098 16814110 chr3L 16814505 16814532 4 418 3.0 5.0 4.0 0.8 434 chr3L 16814098 intron,intron nudC +,CG13024 - chr3L 16814315 intron,intron nudC +,CG13024 - chr3L 16814532 intron,intron nudC +,CG13024 - chr3L_4_16810001 chr3L_16810001 RAL-320 1752 chr3L 16818726 16818780 chr3L 16818822 16818876 24 94 4.0 3.5 3.8 5.0 150 chr3L 16818726 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818876 intron,intron nudC +,CG13024 - chr3L_24_16815001 chr3L_16815001 RAL-320 1753 chr3L 16840192 16840215 chr3L 16840296 16840319 4 104 12.0 3.5 7.8 0.5 127 chr3L 16840192 intergenic not near genes chr3L 16840256 intergenic not near genes chr3L 16840319 intergenic not near genes chr3L_4_16840001 chr3L_16840001 RAL-320 1754 chr3L 16845005 16845042 chr3L 16845138 16845175 17 131 4.5 6.5 5.5 2.6 170 chr3L 16845005 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845175 intergenic CG9669 -,CG9715 + chr3L_17_16845001 chr3L_16845001 RAL-320 1755 chr3L 16912911 16912955 chr3L 16913009 16913053 12 95 0.0 4.5 2.2 3.8 142 chr3L 16912911 intron Lmpt + chr3L 16912982 intron Lmpt + chr3L 16913053 intron Lmpt + chr3L_12_16910001 chr3L_16910001 RAL-320 1756 chr3L 16941384 16941390 chr3L 16941505 16941510 4 120 6.0 0.5 3.2 1.0 126 chr3L 16941384 intron Cpr73D - chr3L 16941447 intron Cpr73D - chr3L 16941510 intron Cpr73D - chr3L_4_16940001 chr3L_16940001 RAL-320 1757 chr3L 16941394 16941411 chr3L 16941504 16941532 10 120 3.0 0.5 1.8 3.6 138 chr3L 16941394 intron Cpr73D - chr3L 16941463 intron Cpr73D - chr3L 16941532 intron Cpr73D - chr3L_10_16940001 chr3L_16940001 RAL-320 1758 chr3L 16945717 16945741 chr3L 16954884 16954914 roo 11 9164 3.5 7.5 5.5 1.7 9197 chr3L 16945717 exon Obp73a + chr3L 16950316 intergenic not near genes chr3L 16954914 5` UTR Nc73EF + chr3L_11_16950001 chr3L_16950001 RAL-320 1759 chr3L 16973359 16973376 chr3L 23583082 23583099 6 6609723 11.0 12.5 11.8 0.5 6609740 chr3L 16973359 intron Exn + chr3L 20278229 exon gogo - chr3L 23583099 intron AGO3 + chr3L_6_20275001 chr3L_20275001 RAL-320 1760 chr3L 17027164 17027188 chr3L 17027260 17027300 7 110 2.0 4.5 3.2 1.7 136 chr3L 17027164 intergenic Fit2 +,CG7730 + chr3L 17027232 intergenic Fit2 +,CG7730 + chr3L 17027300 intergenic Fit2 +,CG7730 + chr3L_7_17025001 chr3L_17025001 RAL-320 1761 chr3L 17034914 17034958 chr3L 17035122 17035166 G2 17 206 4.0 3.0 3.5 3.8 252 chr3L 17034914 intergenic not near genes chr3L 17035040 intergenic not near genes chr3L 17035166 intergenic not near genes chr3L_17_17035001 chr3L_17035001 RAL-320 1762 chr3L 17084993 17084998 chr3L 17094162 17094167 roo 4 9169 10.0 9.0 9.5 0.4 9174 chr3L 17084993 intron Rbp6 - chr3L 17089580 intron Rbp6 - chr3L 17094167 intron Rbp6 - chr3L_4_17085001 chr3L_17085001 RAL-320 1763 chr3L 17085000 17085032 chr3L 17094153 17094201 roo 15 9166 6.5 7.0 6.8 1.9 9201 chr3L 17085000 intron Rbp6 - chr3L 17089600 intron Rbp6 - chr3L 17094201 intron Rbp6 - chr3L_15_17085001 chr3L_17085001 RAL-320 1764 chr3L 17259904 17259936 chr3L 17260000 17260032 10 91 8.5 6.5 7.5 1.2 128 chr3L 17259904 intron,5` UTR CR43870 +,CR43874 + chr3L 17259968 intron,5` UTR CR43870 +,CR43874 + chr3L 17260032 intron,5` UTR CR43870 +,CR43874 + chr3L_10_17255001 chr3L_17255001 RAL-320 1765 chr3L 17367421 17367457 chr3L 17367530 17367571 12 113 5.5 4.0 4.8 2.1 150 chr3L 17367421 intergenic CR45688 +,Cad74A - chr3L 17367496 intergenic CR45688 +,Cad74A - chr3L 17367571 intergenic Cad74A -,CR45688 + chr3L_12_17365001 chr3L_17365001 RAL-320 1766 chr3L 17408892 17408925 chr3L 17408988 17408999 7 93 6.5 6.5 6.5 0.9 107 chr3L 17408892 intron blot - chr3L 17408946 intron blot - chr3L 17408999 intron blot - chr3L_7_17405001 chr3L_17405001 RAL-320 1767 chr3L 17510733 17510764 chr3L 17510828 17510866 12 100 2.0 5.5 3.8 2.5 133 chr3L 17510733 exon Oatp74D + chr3L 17510800 intron Oatp74D + chr3L 17510866 intron Oatp74D + chr3L_12_17510001 chr3L_17510001 RAL-320 1768 chr3L 17516961 17517001 chr3L 17524536 17524554 412 7 7563 8.5 4.0 6.2 1.0 7593 chr3L 17516961 intron CG7564 + chr3L 17520758 intron CG7564 + chr3L 17524554 3` UTR CG7564 + chr3L_7_17520001 chr3L_17520001 RAL-320 1769 chr3L 17578522 17578572 chr3L 17578642 17578658 7 116 2.0 0.5 1.2 3.2 136 chr3L 17578522 intron Eip74EF - chr3L 17578590 intron Eip74EF - chr3L 17578658 intron Eip74EF - chr3L_7_17575001 chr3L_17575001 RAL-320 1770 chr3L 17583537 17583542 chr3L 17583638 17583651 4 110 5.0 9.0 7.0 0.5 114 chr3L 17583537 intron Eip74EF - chr3L 17583594 intron Eip74EF - chr3L 17583651 intron Eip74EF - chr3L_4_17580001 chr3L_17580001 RAL-320 1771 chr3L 17586949 17586999 chr3L 17587103 17587153 8 153 5.0 4.0 4.5 1.5 204 chr3L 17586949 intron Eip74EF - chr3L 17587051 intron Eip74EF - chr3L 17587153 intron Eip74EF - chr3L_8_17585001 chr3L_17585001 RAL-320 1772 chr3L 17592767 17592816 chr3L 17592878 17592907 15 109 6.5 7.0 6.8 1.9 140 chr3L 17592767 intron Eip74EF - chr3L 17592837 intron Eip74EF - chr3L 17592907 intron Eip74EF - chr3L_15_17590001 chr3L_17590001 RAL-320 1773 chr3L 17594222 17594273 chr3L 17594321 17594351 17 97 4.5 6.0 5.2 2.7 129 chr3L 17594222 intron Eip74EF - chr3L 17594286 intron Eip74EF - chr3L 17594351 intron Eip74EF - chr3L_17_17590001 chr3L_17590001 RAL-320 1774 chr3L 17691958 17691989 chr3L 17692062 17692093 8 102 8.5 6.5 7.5 0.9 135 chr3L 17691958 intron Ccn + chr3L 17692026 intron Ccn + chr3L 17692093 intron Ccn + chr3L_8_17690001 chr3L_17690001 RAL-320 1775 chr3L 17789825 17789877 chr3L 17789921 17789973 15 96 4.0 6.0 5.0 2.5 148 chr3L 17789825 intergenic not near genes chr3L 17789899 intergenic not near genes chr3L 17789973 intergenic not near genes chr3L_15_17785001 chr3L_17785001 RAL-320 1776 chr3L 17790583 17790635 chr3L 17790868 17790914 13 284 3.5 2.0 2.8 3.4 331 chr3L 17790583 intergenic CG42815 - chr3L 17790748 intergenic CG42815 - chr3L 17790914 intergenic CG42815 - chr3L_13_17790001 chr3L_17790001 RAL-320 1777 chr3L 17799791 17799840 chr3L 17801598 17801647 S-element 23 1806 3.0 3.0 3.0 5.8 1856 chr3L 17799791 intron NUCB1 - chr3L 17800719 intron NUCB1 - chr3L 17801647 intron NUCB1 - chr3L_23_17800001 chr3L_17800001 RAL-320 1778 chr3L 17834303 17834357 chr3L 17834487 17834534 17 178 0.0 5.5 2.8 4.5 231 chr3L 17834303 intron Grd + chr3L 17834418 intron Grd + chr3L 17834534 intron Grd + chr3L_17_17830001 chr3L_17830001 RAL-320 1779 chr3L 17837604 17837655 chr3L 17837712 17837763 12 101 3.0 2.5 2.8 3.2 159 chr3L 17837604 exon Grd + chr3L 17837684 intron Grd + chr3L 17837763 exon Grd + chr3L_12_17835001 chr3L_17835001 RAL-320 1780 chr3L 17918370 17918386 chr3L 17921174 17921209 opus 5 2818 4.5 3.5 4.0 1.0 2839 chr3L 17918370 intergenic not near genes chr3L 17919790 intergenic not near genes chr3L 17921209 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-320 1781 chr3L 17968118 17968155 chr3L 17968219 17968256 14 97 7.0 5.5 6.2 1.9 138 chr3L 17968118 intron Eip75B - chr3L 17968187 intron Eip75B - chr3L 17968256 intron Eip75B - chr3L_14_17965001 chr3L_17965001 RAL-320 1782 chr3L 17968158 17968166 chr3L 17968217 17968260 4 89 5.5 5.5 5.5 0.6 102 chr3L 17968158 intron Eip75B - chr3L 17968209 intron Eip75B - chr3L 17968260 intron Eip75B - chr3L_4_17965001 chr3L_17965001 RAL-320 1783 chr3L 17991557 17991588 chr3L 17991655 17991686 13 98 6.5 4.5 5.5 2.0 129 chr3L 17991557 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991686 intron Eip75B - chr3L_13_17990001 chr3L_17990001 RAL-320 1784 chr3L 17999754 17999797 chr3L 17999853 17999897 4 98 4.0 2.5 3.2 1.0 143 chr3L 17999754 intron Eip75B - chr3L 17999826 intron Eip75B - chr3L 17999897 intron Eip75B - chr3L_4_17995001 chr3L_17995001 RAL-320 1785 chr3L 18002735 18002745 chr3L 18002817 18002852 4 101 2.0 5.5 3.8 0.8 117 chr3L 18002735 intron Eip75B - chr3L 18002794 intron Eip75B - chr3L 18002852 intron Eip75B - chr3L_4_18000001 chr3L_18000001 RAL-320 1786 chr3L 18024030 18024060 chr3L 18024153 18024178 6 122 7.0 0.0 3.5 1.3 148 chr3L 18024030 intron Eip75B - chr3L 18024104 intron Eip75B - chr3L 18024178 intron Eip75B - chr3L_6_18020001 chr3L_18020001 RAL-320 1787 chr3L 18029290 18029297 chr3L 18029414 18029421 6 124 0.0 3.5 1.8 2.1 131 chr3L 18029290 intron Eip75B - chr3L 18029356 intron Eip75B - chr3L 18029421 intron Eip75B - chr3L_6_18025001 chr3L_18025001 RAL-320 1788 chr3L 18047685 18047739 chr3L 18056762 18056816 roo 23 9075 3.5 2.5 3.0 5.8 9131 chr3L 18047685 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056816 intron Eip75B - chr3L_23_18050001 chr3L_18050001 RAL-320 1789 chr3L 18107601 18107643 chr3L 18107709 18107744 14 111 5.5 4.0 4.8 2.4 143 chr3L 18107601 intergenic mRpS26 +,CG5147 - chr3L 18107672 intergenic mRpS26 +,CG5147 - chr3L 18107744 intergenic CG5147 -,mRpS26 + chr3L_14_18105001 chr3L_18105001 RAL-320 1790 chr3L 18118199 18118240 chr3L 18118291 18118338 12 97 3.5 7.0 5.2 1.9 139 chr3L 18118199 3` UTR,intron CG32195 +,CG7341 + chr3L 18118268 3` UTR,intron CG32195 +,CG7341 + chr3L 18118338 3` UTR,intron CG32195 +,CG7341 + chr3L_12_18115001 chr3L_18115001 RAL-320 1791 chr3L 18150298 18150339 chr3L 18150415 18150436 14 115 4.0 2.5 3.2 3.3 138 chr3L 18150298 intron CG7330 + chr3L 18150367 intron CG7330 + chr3L 18150436 intron CG7330 + chr3L_14_18150001 chr3L_18150001 RAL-320 1792 chr3L 18152711 18152755 chr3L 18152842 18152885 9 127 6.5 3.0 4.8 1.6 174 chr3L 18152711 intron CG7330 + chr3L 18152798 intron CG7330 + chr3L 18152885 intron CG7330 + chr3L_9_18150001 chr3L_18150001 RAL-320 1793 chr3L 18209190 18209198 chr3L 18209296 18209304 4 106 4.5 6.0 5.2 0.6 114 chr3L 18209190 intergenic not near genes chr3L 18209247 intergenic not near genes chr3L 18209304 intergenic not near genes chr3L_4_18205001 chr3L_18205001 RAL-320 1794 chr3L 18221083 18221131 chr3L 18221184 18221236 12 98 1.0 0.0 0.5 8.0 153 chr3L 18221083 intergenic not near genes chr3L 18221160 intergenic not near genes chr3L 18221236 intergenic not near genes chr3L_12_18220001 chr3L_18220001 RAL-320 1795 chr3L 18223144 18223185 chr3L 18223247 18223300 18 101 8.0 0.5 4.2 3.5 156 chr3L 18223144 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223300 intergenic not near genes chr3L_18_18220001 chr3L_18220001 RAL-320 1796 chr3L 18253682 18253707 chr3L 18253910 18253935 9 226 6.0 3.0 4.5 1.6 253 chr3L 18253682 intergenic not near genes chr3L 18253808 intergenic not near genes chr3L 18253935 intergenic not near genes chr3L_9_18250001 chr3L_18250001 RAL-320 1797 chr3L 18262456 18262489 chr3L 18262559 18262582 11 101 3.0 3.5 3.2 2.6 126 chr3L 18262456 intergenic not near genes chr3L 18262519 intergenic not near genes chr3L 18262582 intergenic not near genes chr3L_11_18260001 chr3L_18260001 RAL-320 1798 chr3L 18301332 18301380 chr3L 18301441 18301489 14 109 2.0 2.5 2.2 4.4 157 chr3L 18301332 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301489 intergenic CG13700 - chr3L_14_18300001 chr3L_18300001 RAL-320 1799 chr3L 18343674 18343680 chr3L 18343962 18343978 4 296 2.5 6.0 4.2 0.8 304 chr3L 18343674 intergenic not near genes chr3L 18343826 intergenic not near genes chr3L 18343978 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-320 1800 chr3L 18420051 18420097 chr3L 18420155 18420201 11 98 1.0 5.0 3.0 2.8 150 chr3L 18420051 intergenic not near genes chr3L 18420126 intergenic not near genes chr3L 18420201 intergenic not near genes chr3L_11_18420001 chr3L_18420001 RAL-320 1801 chr3L 18445230 18445274 chr3L 18445328 18445372 11 98 3.5 0.0 1.8 3.9 142 chr3L 18445230 intergenic not near genes chr3L 18445301 intergenic not near genes chr3L 18445372 intergenic not near genes chr3L_11_18445001 chr3L_18445001 RAL-320 1802 chr3L 18448596 18448617 chr3L 18448708 18448729 8 112 7.0 4.5 5.8 1.2 133 chr3L 18448596 intergenic not near genes chr3L 18448662 intergenic not near genes chr3L 18448729 intergenic not near genes chr3L_8_18445001 chr3L_18445001 RAL-320 1803 chr3L 18456255 18456300 chr3L 18456363 18456408 11 105 5.0 4.0 4.5 2.0 153 chr3L 18456255 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456408 3` UTR CR44670 - chr3L_11_18455001 chr3L_18455001 RAL-320 1804 chr3L 18484818 18484852 chr3L 18484925 18484944 8 103 5.0 4.5 4.8 1.4 126 chr3L 18484818 intergenic AstC-R2 - chr3L 18484881 intergenic AstC-R2 - chr3L 18484944 intergenic AstC-R2 - chr3L_8_18480001 chr3L_18480001 RAL-320 1805 chr3L 18506144 18506162 chr3L 18509606 18509634 F-element 8 3476 5.5 5.5 5.5 1.2 3490 chr3L 18506144 intergenic not near genes chr3L 18507889 intergenic not near genes chr3L 18509634 intergenic not near genes chr3L_8_18505001 chr3L_18505001 RAL-320 1806 chr3L 18514877 18514934 chr3L 18520091 18520145 BS 18 5211 4.0 4.0 4.0 3.6 5268 chr3L 18514877 intergenic not near genes chr3L 18517511 intergenic not near genes chr3L 18520145 intergenic not near genes chr3L_18_18515001 chr3L_18515001 RAL-320 1807 chr3L 18520529 18520573 chr3L 18520628 18520645 14 92 4.0 4.0 4.0 2.8 116 chr3L 18520529 intergenic not near genes chr3L 18520587 intergenic not near genes chr3L 18520645 intergenic not near genes chr3L_14_18520001 chr3L_18520001 RAL-320 1808 chr3L 18525447 18525485 chr3L 18525691 18525735 10 249 3.5 3.5 3.5 2.2 288 chr3L 18525447 intergenic not near genes chr3L 18525591 intergenic not near genes chr3L 18525735 intergenic not near genes chr3L_10_18525001 chr3L_18525001 RAL-320 1809 chr3L 18528613 18528659 chr3L 18537794 18537830 roo 15 9177 4.5 8.0 6.2 2.1 9217 chr3L 18528613 intergenic not near genes chr3L 18533222 intergenic not near genes chr3L 18537830 intergenic not near genes chr3L_15_18530001 chr3L_18530001 RAL-320 1810 chr3L 18570772 18570797 chr3L 18570935 18570959 7 163 3.0 6.0 4.5 1.3 187 chr3L 18570772 intron AstC-R1 + chr3L 18570866 intron AstC-R1 + chr3L 18570959 intron AstC-R1 + chr3L_7_18570001 chr3L_18570001 RAL-320 1811 chr3L 18581324 18581341 chr3L 18581415 18581419 8 93 4.5 6.0 5.2 1.3 95 chr3L 18581324 intergenic not near genes chr3L 18581372 intergenic not near genes chr3L 18581419 intergenic not near genes chr3L_8_18580001 chr3L_18580001 RAL-320 1812 chr3L 18581345 18581364 chr3L 18581414 18581461 8 93 3.0 6.0 4.5 1.5 116 chr3L 18581345 intergenic not near genes chr3L 18581403 intergenic not near genes chr3L 18581461 intergenic not near genes chr3L_8_18580001 chr3L_18580001 RAL-320 1813 chr3L 18586551 18586579 chr3L 18586625 18586625 6 72 2.5 1.5 2.0 2.0 74 chr3L 18586551 intergenic not near genes chr3L 18586588 intergenic not near genes chr3L 18586625 intergenic not near genes chr3L_6_18585001 chr3L_18585001 RAL-320 1814 chr3L 18593935 18593982 chr3L 18595935 18595946 Doc 14 1994 4.0 2.0 3.0 3.5 2011 chr3L 18593935 intergenic term - chr3L 18594940 intergenic not near genes chr3L 18595946 intergenic CR45389 + chr3L_14_18590001 chr3L_18590001 RAL-320 1815 chr3L 18647676 18647690 chr3L 18647789 18647803 5 113 7.0 3.0 5.0 0.8 127 chr3L 18647676 intron MYPT-75D + chr3L 18647740 intron MYPT-75D + chr3L 18647803 intron MYPT-75D + chr3L_5_18645001 chr3L_18645001 RAL-320 1816 chr3L 18649635 18649659 chr3L 18650008 18650042 13 378 5.5 7.5 6.5 1.7 407 chr3L 18649635 intron MYPT-75D + chr3L 18649838 intron MYPT-75D + chr3L 18650042 intron MYPT-75D + chr3L_13_18645001 chr3L_18645001 RAL-320 1817 chr3L 18665193 18665220 chr3L 18665298 18665318 13 104 5.0 0.0 2.5 3.7 125 chr3L 18665193 intron MYPT-75D + chr3L 18665256 intron MYPT-75D + chr3L 18665318 intron MYPT-75D + chr3L_13_18665001 chr3L_18665001 RAL-320 1818 chr3L 18710776 18710791 chr3L 18718746 18718760 Stalker2 8 7968 3.5 2.5 3.0 2.0 7984 chr3L 18710776 intergenic not near genes chr3L 18714768 intergenic not near genes chr3L 18718760 intergenic not near genes chr3L_8_18710001 chr3L_18710001 RAL-320 1819 chr3L 18721764 18721804 chr3L 18721875 18721915 16 108 4.5 7.0 5.8 2.4 151 chr3L 18721764 intergenic CG12477 - chr3L 18721840 intergenic CG12477 - chr3L 18721915 3` UTR CG12477 - chr3L_16_18720001 chr3L_18720001 RAL-320 1820 chr3L 18730358 18730380 chr3L 18730558 18730561 5 193 8.0 4.5 6.2 0.7 203 chr3L 18730358 intergenic not near genes chr3L 18730460 intergenic not near genes chr3L 18730561 intergenic not near genes chr3L_5_18730001 chr3L_18730001 RAL-320 1821 chr3L 18730382 18730403 chr3L 18730557 18730603 5 195 5.5 4.0 4.8 0.9 221 chr3L 18730382 intergenic not near genes chr3L 18730492 intergenic not near genes chr3L 18730603 intergenic not near genes chr3L_5_18730001 chr3L_18730001 RAL-320 1822 chr3L 18753532 18753560 chr3L 18753634 18753659 8 102 1.5 4.5 3.0 2.0 127 chr3L 18753532 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753659 intron ftz-f1 - chr3L_8_18750001 chr3L_18750001 RAL-320 1823 chr3L 18772389 18772442 chr3L 18781090 18781116 roo 28 8697 5.0 2.0 3.5 6.2 8727 chr3L 18772389 intron ftz-f1 - chr3L 18776752 intron ftz-f1 - chr3L 18781116 intron ftz-f1 - chr3L_28_18775001 chr3L_18775001 RAL-320 1824 chr3L 18784374 18784405 chr3L 18784483 18784514 9 109 5.0 3.5 4.2 1.7 140 chr3L 18784374 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_9_18780001 chr3L_18780001 RAL-320 1825 chr3L 18833123 18833165 chr3L 18833266 18833302 15 141 6.0 5.0 5.5 2.3 179 chr3L 18833123 intron Indy - chr3L 18833212 intron Indy - chr3L 18833302 intron Indy - chr3L_15_18830001 chr3L_18830001 RAL-320 1826 chr3L 18853986 18854024 chr3L 18854107 18854145 12 120 3.5 2.5 3.0 3.0 159 chr3L 18853986 intergenic CR45387 + chr3L 18854066 intergenic CR45387 + chr3L 18854145 intergenic CR45387 + chr3L_12_18850001 chr3L_18850001 RAL-320 1827 chr3L 18933614 18933658 chr3L 18933720 18933768 15 110 3.5 3.0 3.2 3.6 154 chr3L 18933614 intron CG32204 - chr3L 18933691 intron CG32204 - chr3L 18933768 intron CG32204 - chr3L_15_18930001 chr3L_18930001 RAL-320 1828 chr3L 18935073 18935086 chr3L 18935176 18935179 5 102 9.0 6.0 7.5 0.6 106 chr3L 18935073 intron CG32204 - chr3L 18935126 intron CG32204 - chr3L 18935179 intron CG32204 - chr3L_5_18935001 chr3L_18935001 RAL-320 1829 chr3L 18935088 18935108 chr3L 18935163 18935212 8 96 4.5 4.0 4.2 1.5 124 chr3L 18935088 intron CG32204 - chr3L 18935150 intron CG32204 - chr3L 18935212 intron CG32204 - chr3L_8_18935001 chr3L_18935001 RAL-320 1830 chr3L 18981419 18981454 chr3L 18981581 18981591 7 154 8.5 4.0 6.2 1.0 172 chr3L 18981419 intergenic not near genes chr3L 18981505 intergenic not near genes chr3L 18981591 intergenic not near genes chr3L_7_18980001 chr3L_18980001 RAL-320 1831 chr3L 19015166 19015212 chr3L 19015267 19015303 10 96 3.0 2.0 2.5 2.9 137 chr3L 19015166 intron nkd - chr3L 19015234 intron nkd - chr3L 19015303 intron nkd - chr3L_10_19015001 chr3L_19015001 RAL-320 1832 chr3L 19115636 19115646 chr3L 19115823 19115834 BS 7 193 17.0 5.5 11.2 0.6 198 chr3L 19115636 intron CG14082 - chr3L 19115735 intron CG14082 - chr3L 19115834 intron CG14082 - chr3L_7_19115001 chr3L_19115001 RAL-320 1833 chr3L 19115647 19115677 chr3L 19115819 19115840 BS 7 180 6.0 5.0 5.5 1.1 193 chr3L 19115647 intron CG14082 - chr3L 19115744 intron CG14082 - chr3L 19115840 intron CG14082 - chr3L_7_19115001 chr3L_19115001 RAL-320 1834 chr3L 19117045 19117071 chr3L 19124497 19124538 mdg1 11 7456 5.5 7.5 6.5 1.5 7493 chr3L 19117045 intron CG14082 - chr3L 19120792 intron CG14082 - chr3L 19124538 intron CG14082 - chr3L_11_19120001 chr3L_19120001 RAL-320 1835 chr3L 19182364 19182419 chr3L 19182465 19182470 17 95 2.0 1.5 1.8 6.1 106 chr3L 19182364 intron fz2 - chr3L 19182417 intron fz2 - chr3L 19182470 intron fz2 - chr3L_17_19180001 chr3L_19180001 RAL-320 1836 chr3L 19208048 19208068 chr3L 19209442 19209452 Doc 9 1393 9.0 3.5 6.2 1.2 1404 chr3L 19208048 intron fz2 - chr3L 19208750 intron fz2 - chr3L 19209452 intron fz2 - chr3L_9_19205001 chr3L_19205001 RAL-320 1837 chr3L 19208070 19208075 chr3L 19209436 19209469 Doc 4 1387 7.5 3.0 5.2 0.6 1399 chr3L 19208070 intron fz2 - chr3L 19208770 intron fz2 - chr3L 19209469 intron fz2 - chr3L_4_19205001 chr3L_19205001 RAL-320 1838 chr3L 19210104 19210141 chr3L 19210212 19210256 18 112 0.0 3.0 1.5 7.2 152 chr3L 19210104 intron fz2 - chr3L 19210180 intron fz2 - chr3L 19210256 intron fz2 - chr3L_18_19210001 chr3L_19210001 RAL-320 1839 chr3L 19220633 19220635 chr3L 22908066 22908067 9 3687432 25.0 24.5 24.8 0.3 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-320 1840 chr3L 19298385 19298407 chr3L 19298591 19298608 6 204 6.0 6.0 6.0 0.9 223 chr3L 19298385 3` UTR fal + chr3L 19298496 3` UTR fal + chr3L 19298608 3` UTR fal + chr3L_6_19295001 chr3L_19295001 RAL-320 1841 chr3L 19342742 19342777 chr3L 19342853 19342888 11 111 5.0 2.5 3.8 2.3 146 chr3L 19342742 3` UTR CG32206 - chr3L 19342815 3` UTR CG32206 - chr3L 19342888 3` UTR CG32206 - chr3L_11_19340001 chr3L_19340001 RAL-320 1842 chr3L 19365918 19365930 chr3L 19366035 19366047 4 116 0.0 8.5 4.2 0.8 129 chr3L 19365918 intron CG32206 - chr3L 19365982 intron CG32206 - chr3L 19366047 intron CG32206 - chr3L_4_19365001 chr3L_19365001 RAL-320 1843 chr3L 19403772 19403816 chr3L 19403878 19403882 12 101 6.5 9.0 7.8 1.4 110 chr3L 19403772 intron CG32206 - chr3L 19403827 intron CG32206 - chr3L 19403882 intron CG32206 - chr3L_12_19400001 chr3L_19400001 RAL-320 1844 chr3L 19426746 19426784 chr3L 19426824 19426832 5 73 6.0 7.0 6.5 0.7 86 chr3L 19426746 intergenic not near genes chr3L 19426789 intergenic not near genes chr3L 19426832 intergenic not near genes chr3L_5_19425001 chr3L_19425001 RAL-320 1845 chr3L 19430375 19430434 chr3L 19430476 19430516 9 92 0.0 6.5 3.2 2.1 141 chr3L 19430375 intergenic not near genes chr3L 19430446 intergenic not near genes chr3L 19430516 intergenic not near genes chr3L_9_19430001 chr3L_19430001 RAL-320 1846 chr3L 19488481 19488498 chr3L 19488572 19488600 6 98 10.5 5.0 7.8 0.7 119 chr3L 19488481 intergenic pncr009:3L -,CG32212 + chr3L 19488540 intergenic pncr009:3L -,CG32212 + chr3L 19488600 intergenic pncr009:3L -,CG32212 + chr3L_6_19485001 chr3L_19485001 RAL-320 1847 chr3L 19576358 19576396 chr3L 19576455 19576493 7 97 7.0 2.0 4.5 1.3 135 chr3L 19576358 intron Shal - chr3L 19576426 intron Shal - chr3L 19576493 intron Shal - chr3L_7_19575001 chr3L_19575001 RAL-320 1848 chr3L 19605568 19605578 chr3L 19605676 19605686 4 108 2.0 6.5 4.2 0.8 118 chr3L 19605568 intron lush - chr3L 19605627 intron lush - chr3L 19605686 intron lush - chr3L_4_19605001 chr3L_19605001 RAL-320 1849 chr3L 19636847 19636851 chr3L 19636969 19636973 4 122 15.5 15.0 15.2 0.2 126 chr3L 19636847 intergenic CG8786 - chr3L 19636910 intergenic CG8786 - chr3L 19636973 intergenic CG8786 - chr3L_4_19635001 chr3L_19635001 RAL-320 1850 chr3L 19703837 19703872 chr3L 19704005 19704041 9 168 5.0 10.5 7.8 1.0 204 chr3L 19703837 intron serp - chr3L 19703939 intron serp - chr3L 19704041 intron serp - chr3L_9_19700001 chr3L_19700001 RAL-320 1851 chr3L 19779504 19779512 chr3L 19779613 19779626 5 112 10.5 6.0 8.2 0.5 122 chr3L 19779504 intron,intron CG42637 -,Gyc76C - chr3L 19779565 intron,intron CG42637 -,Gyc76C - chr3L 19779626 intron,intron CG42637 -,Gyc76C - chr3L_5_19775001 chr3L_19775001 RAL-320 1852 chr3L 19779516 19779544 chr3L 19779610 19779658 8 100 4.5 5.0 4.8 1.4 142 chr3L 19779516 intron,intron CG42637 -,Gyc76C - chr3L 19779587 intron,intron CG42637 -,Gyc76C - chr3L 19779658 intron,intron CG42637 -,Gyc76C - chr3L_8_19775001 chr3L_19775001 RAL-320 1853 chr3L 19820279 19820315 chr3L 19827848 19827884 412 12 7567 3.5 4.5 4.0 2.4 7605 chr3L 19820279 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827884 intron Deaf1 + chr3L_12_19820001 chr3L_19820001 RAL-320 1854 chr3L 19848487 19848533 chr3L 19857697 19857734 roo 12 9205 2.5 7.5 5.0 2.0 9247 chr3L 19848487 intron Papss + chr3L 19853110 intron Papss + chr3L 19857734 intron Papss + chr3L_12_19850001 chr3L_19850001 RAL-320 1855 chr3L 19861804 19861847 chr3L 19863612 19863646 S-element 10 1804 5.5 3.0 4.2 1.9 1842 chr3L 19861804 5` UTR CR45433 + chr3L 19862725 intergenic not near genes chr3L 19863646 intergenic not near genes chr3L_10_19860001 chr3L_19860001 RAL-320 1856 chr3L 19933517 19933557 chr3L 19934359 19934399 25 837 3.0 6.0 4.5 4.5 882 chr3L 19933517 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934399 intergenic CR45678 + chr3L_25_19930001 chr3L_19930001 RAL-320 1857 chr3L 19981189 19981232 chr3L 19981285 19981332 11 100 3.0 6.0 4.5 2.0 143 chr3L 19981189 intergenic CG17732 + chr3L 19981260 intergenic CG17732 + chr3L 19981332 intergenic CG17732 + chr3L_11_19980001 chr3L_19980001 RAL-320 1858 chr3L 20086767 20086811 chr3L 20086865 20086898 11 96 4.0 1.0 2.5 3.1 131 chr3L 20086767 intron sNPF-R - chr3L 20086832 intron sNPF-R - chr3L 20086898 intron sNPF-R - chr3L_11_20085001 chr3L_20085001 RAL-320 1859 chr3L 20113458 20113507 chr3L 20113573 20113621 18 112 3.0 6.5 4.8 3.1 163 chr3L 20113458 intergenic not near genes chr3L 20113540 intergenic not near genes chr3L 20113621 intergenic not near genes chr3L_18_20110001 chr3L_20110001 RAL-320 1860 chr3L 20113639 20113687 chr3L 20122916 20122964 roo 14 9274 2.5 5.0 3.8 2.9 9325 chr3L 20113639 intergenic not near genes chr3L 20118302 intergenic not near genes chr3L 20122964 intergenic not near genes chr3L_14_20115001 chr3L_20115001 RAL-320 1861 chr3L 20143071 20143110 chr3L 20143171 20143190 5 89 4.0 8.5 6.2 0.7 119 chr3L 20143071 intergenic not near genes chr3L 20143130 intergenic not near genes chr3L 20143190 intergenic not near genes chr3L_5_20140001 chr3L_20140001 RAL-320 1862 chr3L 20148268 20148312 chr3L 20148378 20148381 5 102 8.0 7.5 7.8 0.6 113 chr3L 20148268 intergenic not near genes chr3L 20148324 intergenic not near genes chr3L 20148381 intergenic not near genes chr3L_5_20145001 chr3L_20145001 RAL-320 1863 chr3L 20247745 20247768 chr3L 20247888 20247896 5 140 3.0 3.0 3.0 1.2 151 chr3L 20247745 intergenic rdgC + chr3L 20247820 intergenic rdgC + chr3L 20247896 intergenic rdgC + chr3L_5_20245001 chr3L_20245001 RAL-320 1864 chr3L 20257337 20257362 chr3L 20258452 20258502 pogo 15 1133 1.5 5.5 3.5 3.3 1165 chr3L 20257337 intron rdgC + chr3L 20257920 intron rdgC + chr3L 20258502 intron rdgC + chr3L_15_20255001 chr3L_20255001 RAL-320 1865 chr3L 20283658 20283705 chr3L 20283762 20283809 14 98 4.0 3.0 3.5 3.1 151 chr3L 20283658 intron gogo - chr3L 20283734 intron gogo - chr3L 20283809 intron gogo - chr3L_14_20280001 chr3L_20280001 RAL-320 1866 chr3L 20321109 20321123 chr3L 20342900 20342910 17.6 5 21787 14.5 52.0 33.2 0.1 21801 chr3L 20321109 exon Spn77Bb + chr3L 20332010 intergenic not near genes chr3L 20342910 exon Spn77Bc + chr3L_5_20330001 chr3L_20330001 RAL-320 1867 chr3L 20345591 20345640 chr3L 20345689 20345734 19 97 5.5 8.0 6.8 2.4 143 chr3L 20345591 intergenic Rbbp5 - chr3L 20345662 intergenic Rbbp5 - chr3L 20345734 intergenic Rbbp5 - chr3L_19_20345001 chr3L_20345001 RAL-320 1868 chr3L 20386919 20386968 chr3L 20387041 20387090 16 121 6.5 4.5 5.5 2.5 171 chr3L 20386919 intron fbl + chr3L 20387004 intron fbl + chr3L 20387090 intron fbl + chr3L_16_20385001 chr3L_20385001 RAL-320 1869 chr3L 20476744 20476779 chr3L 20484363 20484398 springer 9 7618 4.5 6.0 5.2 1.5 7654 chr3L 20476744 3` UTR isoQC + chr3L 20480571 intergenic not near genes chr3L 20484398 3` UTR ZnT77C - chr3L_9_20480001 chr3L_20480001 RAL-320 1870 chr3L 20699898 20699931 chr3L 20699984 20700022 12 86 2.5 5.5 4.0 2.4 124 chr3L 20699898 intergenic not near genes chr3L 20699960 intergenic not near genes chr3L 20700022 intergenic not near genes chr3L_12_20695001 chr3L_20695001 RAL-320 1871 chr3L 20710739 20710790 chr3L 20710836 20710886 19 95 6.5 3.0 4.8 3.3 147 chr3L 20710739 intergenic not near genes chr3L 20710812 intergenic not near genes chr3L 20710886 intergenic not near genes chr3L_19_20710001 chr3L_20710001 RAL-320 1872 chr3L 20849255 20849302 chr3L 20849354 20849393 17 94 2.5 6.5 4.5 3.1 138 chr3L 20849255 intron CG32432 - chr3L 20849324 intron CG32432 - chr3L 20849393 intron CG32432 - chr3L_17_20845001 chr3L_20845001 RAL-320 1873 chr3L 20913755 20913781 chr3L 20913829 20913846 10 85 1.0 3.0 2.0 3.3 91 chr3L 20913755 intergenic CR43930 - chr3L 20913800 intergenic CR43930 - chr3L 20913846 intergenic CR43930 - chr3L_10_20910001 chr3L_20910001 RAL-320 1874 chr3L 21014932 21014947 chr3L 21023396 21023416 Tirant 4 8467 5.0 5.0 5.0 0.7 8484 chr3L 21014932 intron skd - chr3L 21019174 intron skd - chr3L 21023416 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-320 1875 chr3L 21039672 21039680 chr3L 21039783 21039791 4 111 5.0 6.0 5.5 0.6 119 chr3L 21039672 intron siz + chr3L 21039732 intron siz + chr3L 21039791 intron siz + chr3L_4_21035001 chr3L_21035001 RAL-320 1876 chr3L 21039686 21039712 chr3L 21039776 21039801 10 101 4.5 4.0 4.2 1.9 115 chr3L 21039686 intron siz + chr3L 21039744 intron siz + chr3L 21039801 intron siz + chr3L_10_21035001 chr3L_21035001 RAL-320 1877 chr3L 21151856 21151891 chr3L 21156960 21156995 flea 10 5102 2.5 5.5 4.0 2.0 5139 chr3L 21151856 intron Ac78C - chr3L 21154426 intron Ac78C - chr3L 21156995 intron Ac78C - chr3L_10_21150001 chr3L_21150001 RAL-320 1878 chr3L 21172843 21172871 chr3L 21172938 21172980 13 118 6.5 2.5 4.5 2.4 137 chr3L 21172843 intergenic chb +,asparagine-synthetase + chr3L 21172912 5` UTR chb + chr3L 21172980 5` UTR chb + chr3L_13_21170001 chr3L_21170001 RAL-320 1879 chr3L 21229163 21229210 chr3L 21229270 21229317 13 104 7.0 1.5 4.2 2.5 154 chr3L 21229163 intron Eip78C + chr3L 21229240 intron Eip78C + chr3L 21229317 intron Eip78C + chr3L_13_21225001 chr3L_21225001 RAL-320 1880 chr3L 21232470 21232491 chr3L 21232579 21232632 11 132 5.0 5.0 5.0 1.8 162 chr3L 21232470 intron Eip78C + chr3L 21232551 intron Eip78C + chr3L 21232632 intron Eip78C + chr3L_11_21230001 chr3L_21230001 RAL-320 1881 chr3L 21235632 21235682 chr3L 21235763 21235813 13 125 5.0 4.5 4.8 2.2 181 chr3L 21235632 intron Eip78C + chr3L 21235722 intron Eip78C + chr3L 21235813 intron Eip78C + chr3L_13_21235001 chr3L_21235001 RAL-320 1882 chr3L 21298595 21298632 chr3L 21298691 21298718 14 90 3.5 7.0 5.2 2.3 123 chr3L 21298595 intergenic CG43702 + chr3L 21298656 intergenic CG43702 + chr3L 21298718 intron CG43702 + chr3L_14_21295001 chr3L_21295001 RAL-320 1883 chr3L 21302383 21302422 chr3L 21302479 21302517 6 92 8.0 3.5 5.8 0.9 134 chr3L 21302383 3` UTR CG11309 - chr3L 21302450 3` UTR CG11309 - chr3L 21302517 3` UTR CG11309 - chr3L_6_21300001 chr3L_21300001 RAL-320 1884 chr3L 21306129 21306179 chr3L 21315308 21315337 roo 18 9173 7.5 6.0 6.8 2.3 9208 chr3L 21306129 3` UTR CG7632 + chr3L 21310733 intron Pc - chr3L 21315337 3` UTR Pc - chr3L_18_21310001 chr3L_21310001 RAL-320 1885 chr3L 21361705 21361752 chr3L 21362679 21362699 G2 17 969 3.0 2.0 2.5 4.9 994 chr3L 21361705 intergenic CG32440 + chr3L 21362202 intergenic not near genes chr3L 21362699 intergenic not near genes chr3L_17_21360001 chr3L_21360001 RAL-320 1886 chr3L 21372699 21372726 chr3L 21379227 21379254 McClintock 12 6527 8.0 4.5 6.2 1.7 6555 chr3L 21372699 intergenic not near genes chr3L 21375976 intergenic not near genes chr3L 21379254 intergenic not near genes chr3L_12_21375001 chr3L_21375001 RAL-320 1887 chr3L 21407004 21407026 chr3L 21407072 21407075 7 82 3.5 4.0 3.8 1.5 71 chr3L 21407004 intron rgn + chr3L 21407040 intron rgn + chr3L 21407075 intron rgn + chr3L_7_21405001 chr3L_21405001 RAL-320 1888 chr3L 21412732 21412782 chr3L 21412830 21412867 11 90 4.5 4.5 4.5 2.0 135 chr3L 21412732 intron rgn + chr3L 21412800 intron rgn + chr3L 21412867 intron rgn + chr3L_11_21410001 chr3L_21410001 RAL-320 1889 chr3L 21458324 21458334 chr3L 21458439 21458449 INE-1 4 115 11.5 3.5 7.5 0.5 125 chr3L 21458324 intergenic not near genes chr3L 21458386 intergenic not near genes chr3L 21458449 intergenic not near genes chr3L_4_21455001 chr3L_21455001 RAL-320 1890 chr3L 21639176 21639227 chr3L 21639275 21639312 21 95 6.0 3.0 4.5 3.8 136 chr3L 21639176 intergenic CG32444 +,CG32445 + chr3L 21639244 intergenic CG32445 +,CG32444 + chr3L 21639312 intergenic CG32445 +,CG32444 + chr3L_21_21635001 chr3L_21635001 RAL-320 1891 chr3L 21736339 21736369 chr3L 21736549 21736590 4 218 1.0 7.0 4.0 0.8 251 chr3L 21736339 intergenic CR43888 + chr3L 21736464 intergenic CR43888 + chr3L 21736590 intergenic CR43888 + chr3L_4_21735001 chr3L_21735001 RAL-320 1892 chr3L 21749303 21749321 chr3L 21754478 21754491 Doc 4 5174 9.5 5.5 7.5 0.5 5188 chr3L 21749303 intron Syn1 - chr3L 21751897 intron Syn1 - chr3L 21754491 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-320 1893 chr3L 21758500 21758511 chr3L 21758877 21758899 8 381 29.5 42.5 36.0 0.2 399 chr3L 21758500 intron Syn1 - chr3L 21758700 intron Syn1 - chr3L 21758899 intron Syn1 - chr3L_8_21755001 chr3L_21755001 RAL-320 1894 chr3L 21769038 21769084 chr3L 21769145 21769191 15 103 3.0 5.5 4.2 2.9 153 chr3L 21769038 intron,intron Syn1 -,CG42689 + chr3L 21769114 intron,intron Syn1 -,CG42689 + chr3L 21769191 intron,intron Syn1 -,CG42689 + chr3L_15_21765001 chr3L_21765001 RAL-320 1895 chr3L 21770026 21770034 chr3L 21770130 21770141 4 105 10.0 6.5 8.2 0.4 115 chr3L 21770026 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770084 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770141 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 RAL-320 1896 chr3L 21776662 21776696 chr3L 21776769 21776803 12 107 1.5 4.0 2.8 3.2 141 chr3L 21776662 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776803 intron,intron CG42689 +,CG42552 + chr3L_12_21775001 chr3L_21775001 RAL-320 1897 chr3L 21874978 21875022 chr3L 21875155 21875199 14 176 4.5 6.5 5.5 2.2 221 chr3L 21874978 intron mub + chr3L 21875088 intron mub + chr3L 21875199 intron mub + chr3L_14_21875001 chr3L_21875001 RAL-320 1898 chr3L 21966468 21966508 chr3L 21966571 21966596 4 98 3.0 8.5 5.8 0.6 128 chr3L 21966468 intron CS-2 + chr3L 21966532 intron CS-2 + chr3L 21966596 intron CS-2 + chr3L_4_21965001 chr3L_21965001 RAL-320 1899 chr3L 21975669 21975708 chr3L 21975913 21975962 14 245 3.5 3.0 3.2 3.3 293 chr3L 21975669 intron CG7470 + chr3L 21975816 intron CG7470 + chr3L 21975962 intron CG7470 + chr3L_14_21975001 chr3L_21975001 RAL-320 1900 chr3L 21998475 21998518 chr3L 21998613 21998627 16 132 4.5 3.0 3.8 3.3 152 chr3L 21998475 intergenic not near genes chr3L 21998551 intergenic not near genes chr3L 21998627 intergenic not near genes chr3L_16_21995001 chr3L_21995001 RAL-320 1901 chr3L 21998519 21998523 chr3L 21998612 21998661 4 127 4.5 3.0 3.8 0.8 142 chr3L 21998519 intergenic not near genes chr3L 21998590 intergenic not near genes chr3L 21998661 intergenic not near genes chr3L_4_21995001 chr3L_21995001 RAL-320 1902 chr3L 22010141 22010182 chr3L 22010250 22010291 17 108 5.5 6.5 6.0 2.4 150 chr3L 22010141 intergenic not near genes chr3L 22010216 intergenic not near genes chr3L 22010291 intergenic not near genes chr3L_17_22010001 chr3L_22010001 RAL-320 1903 chr3L 22010483 22010499 chr3L 22010708 22010734 12 237 2.5 9.0 5.8 1.8 251 chr3L 22010483 intergenic not near genes chr3L 22010608 intergenic not near genes chr3L 22010734 intergenic not near genes chr3L_12_22010001 chr3L_22010001 RAL-320 1904 chr3L 22046163 22046212 chr3L 22046285 22046335 13 121 7.5 5.0 6.2 1.8 172 chr3L 22046163 intron Oct-TyrR + chr3L 22046249 intron Oct-TyrR + chr3L 22046335 intron Oct-TyrR + chr3L_13_22045001 chr3L_22045001 RAL-320 1905 chr3L 22092798 22092827 chr3L 22092914 22092948 13 117 5.5 5.0 5.2 2.1 150 chr3L 22092798 intergenic not near genes chr3L 22092873 intergenic not near genes chr3L 22092948 intergenic not near genes chr3L_13_22090001 chr3L_22090001 RAL-320 1906 chr3L 22099656 22099709 chr3L 22105862 22105912 3S18 22 6202 7.0 5.0 6.0 3.1 6256 chr3L 22099656 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105912 intergenic not near genes chr3L_22_22100001 chr3L_22100001 RAL-320 1907 chr3L 22124793 22124841 chr3L 22124891 22124944 13 93 2.0 4.5 3.2 3.1 151 chr3L 22124793 intergenic not near genes chr3L 22124868 intergenic not near genes chr3L 22124944 intergenic not near genes chr3L_13_22120001 chr3L_22120001 RAL-320 1908 chr3L 22130481 22130513 chr3L 22130647 22130679 17 164 4.0 4.5 4.2 3.3 198 chr3L 22130481 intergenic not near genes chr3L 22130580 intergenic not near genes chr3L 22130679 intergenic not near genes chr3L_17_22130001 chr3L_22130001 RAL-320 1909 chr3L 22169462 22169489 chr3L 22169549 22169602 17 108 4.0 1.0 2.5 4.9 140 chr3L 22169462 intron olf413 + chr3L 22169532 intron olf413 + chr3L 22169602 intron olf413 + chr3L_17_22165001 chr3L_22165001 RAL-320 1910 chr3L 22314879 22314908 chr3L 22315098 22315121 7 218 2.0 1.5 1.8 2.5 242 chr3L 22314879 intron Ten-m - chr3L 22315000 intron Ten-m - chr3L 22315121 intron Ten-m - chr3L_7_22315001 chr3L_22315001 RAL-320 1911 chr3L 22411380 22411397 chr3L 22411446 22411447 4 62 2.5 1.0 1.8 1.4 67 chr3L 22411380 intergenic not near genes chr3L 22411414 intergenic not near genes chr3L 22411447 intergenic not near genes chr3L_4_22410001 chr3L_22410001 RAL-320 1912 chr3L 22415747 22415756 chr3L 22415936 22415951 4 193 7.0 9.5 8.2 0.4 204 chr3L 22415747 intergenic not near genes chr3L 22415849 intergenic not near genes chr3L 22415951 intergenic not near genes chr3L_4_22415001 chr3L_22415001 RAL-320 1913 chr3L 22447200 22447226 chr3L 22447297 22447337 15 107 4.0 7.5 5.8 2.2 137 chr3L 22447200 intergenic not near genes chr3L 22447268 intergenic not near genes chr3L 22447337 intergenic not near genes chr3L_15_22445001 chr3L_22445001 RAL-320 1914 chr3L 22522677 22522728 chr3L 22522774 22522825 17 92 7.0 4.0 5.5 2.6 148 chr3L 22522677 intergenic not near genes chr3L 22522751 intergenic not near genes chr3L 22522825 intergenic not near genes chr3L_17_22520001 chr3L_22520001 RAL-320 1915 chr3L 22555763 22555777 chr3L 22563252 22563267 blood 4 7490 7.5 1.0 4.2 0.8 7504 chr3L 22555763 intergenic not near genes chr3L 22559515 intergenic not near genes chr3L 22563267 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-320 1916 chr3L 22555779 22555786 chr3L 22563244 22563244 blood 5 7471 8.0 0.5 4.2 1.0 7465 chr3L 22555779 intergenic not near genes chr3L 22559512 intergenic not near genes chr3L 22563244 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-320 1917 chr3L 22555790 22555802 chr3L 22563241 22563281 blood 6 7454 6.0 0.5 3.2 1.4 7491 chr3L 22555790 intergenic not near genes chr3L 22559536 intergenic not near genes chr3L 22563281 intergenic not near genes chr3L_6_22555001 chr3L_22555001 RAL-320 1918 chr3L 22577637 22577651 chr3L 22582414 22582424 Doc 6 4792 6.0 8.0 7.0 0.8 4787 chr3L 22577637 intergenic not near genes chr3L 22580030 intergenic not near genes chr3L 22582424 3` UTR CG14459 - chr3L_6_22580001 chr3L_22580001 RAL-320 1919 chr3L 22617171 22617222 chr3L 22624641 22624694 blood 13 7470 2.5 2.0 2.2 4.1 7523 chr3L 22617171 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624694 intron CG14459 - chr3L_13_22620001 chr3L_22620001 RAL-320 1920 chr3L 22748936 22748977 chr3L 22749065 22749089 22 126 5.0 8.0 6.5 2.9 153 chr3L 22748936 intergenic CG7369 + chr3L 22749012 intergenic CG7369 +,SPoCk + chr3L 22749089 intergenic SPoCk +,CG7369 + chr3L_22_22745001 chr3L_22745001 RAL-320 1921 chr3L 22761369 22761410 chr3L 22766823 22766864 Ivk 15 5451 3.5 7.0 5.2 2.4 5495 chr3L 22761369 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766864 intron SPoCk + chr3L_15_22760001 chr3L_22760001 RAL-320 1922 chr3L 22774087 22774130 chr3L 22774202 22774232 20 108 9.0 2.0 5.5 3.1 145 chr3L 22774087 intron SPoCk + chr3L 22774160 intron SPoCk + chr3L 22774232 intron SPoCk + chr3L_20_22770001 chr3L_22770001 RAL-320 1923 chr3L 22848686 22848733 chr3L 22848796 22848843 21 109 6.0 7.0 6.5 2.8 157 chr3L 22848686 intergenic not near genes chr3L 22848764 intergenic not near genes chr3L 22848843 intergenic not near genes chr3L_21_22845001 chr3L_22845001 RAL-320 1924 chr3L 22865966 22866004 chr3L 22867119 22867149 Doc 10 1151 5.5 6.0 5.8 1.5 1183 chr3L 22865966 intron CG33170 + chr3L 22866558 intron CG33170 + chr3L 22867149 intron CG33170 + chr3L_10_22865001 chr3L_22865001 RAL-320 1925 chr3L 22885904 22885946 chr3L 22885991 22886043 11 92 5.0 3.5 4.2 2.1 139 chr3L 22885904 intron slif + chr3L 22885974 intron slif + chr3L 22886043 intron slif + chr3L_11_22885001 chr3L_22885001 RAL-320 1926 chr3L 22901222 22901271 chr3L 22901662 22901696 14 438 3.5 5.0 4.2 2.7 474 chr3L 22901222 intergenic not near genes chr3L 22901459 intergenic BoYb + chr3L 22901696 intergenic BoYb + chr3L_14_22900001 chr3L_22900001 RAL-320 1927 chr3L 19220633 19220636 chr3L 22908066 22908066 5 3687432 25.5 24.5 25.0 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-320 1928 chr3L 22912747 22912793 chr3L 22912847 22912894 21 99 3.5 4.5 4.0 4.2 147 chr3L 22912747 intron CG12768 + chr3L 22912820 intron CG12768 + chr3L 22912894 intron CG12768 + chr3L_21_22910001 chr3L_22910001 RAL-320 1929 chr3L 22915153 22915202 chr3L 22915280 22915329 21 126 2.0 8.0 5.0 3.5 176 chr3L 22915153 intron CG12768 + chr3L 22915241 intron CG12768 + chr3L 22915329 intron CG12768 + chr3L_21_22915001 chr3L_22915001 RAL-320 1930 chr3L 22920959 22920962 chr3L 22921022 22921069 5 86 5.5 6.5 6.0 0.7 110 chr3L 22920959 intron CG12768 + chr3L 22921014 intron CG12768 + chr3L 22921069 intron CG12768 + chr3L_5_22920001 chr3L_22920001 RAL-320 1931 chr3L 22943690 22943742 chr3L 22943916 22943926 18 218 4.5 4.5 4.5 3.3 236 chr3L 22943690 intergenic not near genes chr3L 22943808 intergenic not near genes chr3L 22943926 intergenic not near genes chr3L_18_22940001 chr3L_22940001 RAL-320 1932 chr3L 22974365 22974395 chr3L 22974438 22974494 13 89 7.0 4.0 5.5 2.0 129 chr3L 22974365 intergenic not near genes chr3L 22974430 intergenic not near genes chr3L 22974494 intergenic not near genes chr3L_13_22970001 chr3L_22970001 RAL-320 1933 chr3L 22989843 22989884 chr3L 22996837 22996875 297 18 6990 3.5 5.0 4.2 3.5 7032 chr3L 22989843 intergenic not near genes chr3L 22993359 intergenic not near genes chr3L 22996875 intergenic not near genes chr3L_18_22990001 chr3L_22990001 RAL-320 1934 chr3L 23009030 23009051 chr3L 23009189 23009209 4 158 9.5 3.0 6.2 0.6 179 chr3L 23009030 intron nrm + chr3L 23009120 intron nrm + chr3L 23009209 intron nrm + chr3L_4_23005001 chr3L_23005001 RAL-320 1935 chr3L 23035867 23035899 chr3L 23036778 23036810 INE-1 9 911 2.5 6.5 4.5 1.6 943 chr3L 23035867 intron nrm + chr3L 23036338 intron nrm + chr3L 23036810 intron nrm + chr3L_9_23035001 chr3L_23035001 RAL-320 1936 chr3L 23213268 23213293 chr3L 23213655 23213663 7 384 9.5 4.5 7.0 0.9 395 chr3L 23213268 intron nAChRalpha4 + chr3L 23213466 intron nAChRalpha4 + chr3L 23213663 intron nAChRalpha4 + chr3L_7_23210001 chr3L_23210001 RAL-320 1937 chr3L 23213294 23213310 chr3L 23213651 23213657 6 372 4.5 3.5 4.0 1.2 363 chr3L 23213294 intron nAChRalpha4 + chr3L 23213476 intron nAChRalpha4 + chr3L 23213657 intron nAChRalpha4 + chr3L_6_23210001 chr3L_23210001 RAL-320 1938 chr3L 23271720 23271738 chr3L 23276854 23276872 invader2 5 5134 0.0 9.0 4.5 0.9 5152 chr3L 23271720 intron nAChRalpha4 + chr3L 23274296 intron nAChRalpha4 + chr3L 23276872 intron nAChRalpha4 + chr3L_5_23270001 chr3L_23270001 RAL-320 1939 chr3L 23854289 23854315 chr3L 23854399 23854433 4 116 1.5 5.0 3.2 1.0 144 chr3L 23854289 intron CG40470 - chr3L 23854361 intron CG40470 - chr3L 23854433 intron CG40470 - chr3L_4_23850001 chr3L_23850001 RAL-320 1940 chr3L 23909128 23909171 chr3L 23912272 23912301 G3 9 3132 30.0 31.0 30.5 0.3 3173 chr3L 23909128 intron,5` UTR CG40470 -,CR43942 + chr3L 23910714 intron CG40470 - chr3L 23912301 exon CG40470 - chr3L_9_23910001 chr3L_23910001 RAL-320 1941 chr3L 24012408 24012433 chr3L 24020747 24020758 roo 7 8345 2.5 5.0 3.8 1.5 8350 chr3L 24012408 intergenic not near genes chr3L 24016583 intergenic not near genes chr3L 24020758 intergenic not near genes chr3L_7_24015001 chr3L_24015001 RAL-320 1942 chr3L 24021265 24021311 chr3L 24022442 24022483 1360 10 1173 3.5 3.5 3.5 2.2 1218 chr3L 24021265 intergenic not near genes chr3L 24021874 intergenic not near genes chr3L 24022483 intergenic not near genes chr3L_10_24020001 chr3L_24020001 RAL-320 1943 chr3L 24040683 24040698 chr3L 24040801 24040828 4 130 4.0 4.0 4.0 0.8 145 chr3L 24040683 intergenic not near genes chr3L 24040756 intergenic not near genes chr3L 24040828 intergenic not near genes chr3L_4_24040001 chr3L_24040001 RAL-320 1944 chr3L 24282133 24282179 chr3L 24282237 24282271 10 97 1.5 3.0 2.2 3.1 138 chr3L 24282133 intron Snap25 + chr3L 24282202 intron Snap25 + chr3L 24282271 intron Snap25 + chr3L_10_24280001 chr3L_24280001 RAL-320 1945 chr3L 24324292 24324321 chr3L 24324388 24324436 4 107 3.5 1.5 2.5 1.1 144 chr3L 24324292 intergenic not near genes chr3L 24324364 intergenic not near genes chr3L 24324436 intergenic nvd + chr3L_4_24320001 chr3L_24320001 RAL-320 1946 chr3L 24363219 24363270 chr3L 24363317 24363368 11 92 3.0 3.5 3.2 2.6 149 chr3L 24363219 intron nvd + chr3L 24363294 intron nvd + chr3L 24363368 intron nvd + chr3L_11_24360001 chr3L_24360001 RAL-320 1947 chr3L 25106578 25106614 chr3L 25106671 25106721 14 101 4.0 3.0 3.5 3.1 143 chr3L 25106578 intergenic not near genes chr3L 25106650 intergenic not near genes chr3L 25106721 intergenic not near genes chr3L_14_25105001 chr3L_25105001 RAL-320 1948 chr3L 25268548 25268577 chr3L 25268649 25268678 9 100 5.0 7.0 6.0 1.3 130 chr3L 25268548 intron CG40467 - chr3L 25268613 intron CG40467 - chr3L 25268678 intron CG40467 - chr3L_9_25265001 chr3L_25265001 RAL-320 1949 chr3L 25512791 25512808 chr3L 25512883 25512905 6 97 2.0 5.0 3.5 1.3 114 chr3L 25512791 intron CG41343 - chr3L 25512848 intron CG41343 - chr3L 25512905 intron CG41343 - chr3L_6_25510001 chr3L_25510001 RAL-320 1950 chr3L 25513560 25513610 chr3L 25513659 25513691 9 91 4.0 2.0 3.0 2.2 131 chr3L 25513560 intron CG41343 - chr3L 25513626 intron CG41343 - chr3L 25513691 intron CG41343 - chr3L_9_25510001 chr3L_25510001 RAL-320 1951 chr3L 25628488 25628506 chr3L 25633273 25633297 F-element 9 4787 2.5 3.5 3.0 2.2 4809 chr3L 25628488 intron CG41343 - chr3L 25630892 intron CG41343 - chr3L 25633297 intron CG41343 - chr3L_9_25630001 chr3L_25630001 RAL-320 1952 chr3L 25842482 25842501 chr3L 25842561 25842606 5 94 3.0 5.0 4.0 1.0 124 chr3L 25842482 intron CG40178 - chr3L 25842544 intron CG40178 - chr3L 25842606 intron CG40178 - chr3L_5_25840001 chr3L_25840001 RAL-320 1953 chr3L 26009416 26009444 chr3L 26009527 26009555 5 109 5.0 6.5 5.8 0.7 139 chr3L 26009416 intron CG40178 - chr3L 26009486 intron CG40178 - chr3L 26009555 intron CG40178 - chr3L_5_26005001 chr3L_26005001 RAL-320 1954 chr3L 26009451 26009455 chr3L 26009515 26009541 10 84 2.5 4.5 3.5 2.2 90 chr3L 26009451 intron CG40178 - chr3L 26009496 intron CG40178 - chr3L 26009541 intron CG40178 - chr3L_10_26005001 chr3L_26005001 RAL-320 1955 chr3L 26694908 26694957 chr3L 26695008 26695011 14 90 3.5 2.5 3.0 3.5 103 chr3L 26694908 intergenic not near genes chr3L 26694960 intergenic not near genes chr3L 26695011 intergenic not near genes chr3L_14_26690001 chr3L_26690001 RAL-320 1956 chr3L 27167948 27167983 chr3L 27168065 27168121 19 120 4.0 2.5 3.2 4.5 173 chr3L 27167948 intergenic not near genes chr3L 27168034 intergenic not near genes chr3L 27168121 intergenic not near genes chr3L_19_27165001 chr3L_27165001 RAL-320 1957 chr3L 27356101 27356109 chr3L 27357320 27357322 1360 4 1218 6.0 5.0 5.5 0.6 1221 chr3L 27356101 intron Dbp80 + chr3L 27356712 intron Dbp80 + chr3L 27357322 intron Dbp80 + chr3L_4_27355001 chr3L_27355001 RAL-320 1958 chr3L 27390690 27390707 chr3L 27390768 27390796 4 89 31.5 36.0 33.8 0.1 106 chr3L 27390690 intron Dbp80 + chr3L 27390743 intron Dbp80 + chr3L 27390796 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-320 1959 chr3L 27980676 27980730 chr3L 27985494 27985548 Doc 9 4816 3.0 2.5 2.8 2.4 4872 chr3L 27980676 intron CG17514 - chr3L 27983112 intron CG17514 - chr3L 27985548 intron CG17514 - chr3L_9_27980001 chr3L_27980001 RAL-320 1960 chr3R 97111 97113 chr3R 99848 99849 4 2736 12.5 4.0 8.2 0.4 2738 chr3R 97111 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99849 intergenic not near genes chr3R_4_95001 chr3R_95001 RAL-320 1961 chr3R 1021762 1021784 chr3R 1022001 1022045 14 237 21.5 23.5 22.5 0.6 283 chr3R 1021762 intergenic not near genes chr3R 1021904 intergenic not near genes chr3R 1022045 intergenic not near genes chr3R_14_1020001 chr3R_1020001 RAL-320 1962 chr3R 1062371 1062399 chr3R 1062549 1062577 7 177 1.5 2.0 1.8 2.5 206 chr3R 1062371 intron CG15831 + chr3R 1062474 intron CG15831 + chr3R 1062577 intron CG15831 + chr3R_7_1060001 chr3R_1060001 RAL-320 1963 chr3R 1443430 1443450 chr3R 1443516 1443516 4 81 5.0 3.5 4.2 0.8 86 chr3R 1443430 intron CG40155 + chr3R 1443473 intron CG40155 + chr3R 1443516 intron CG40155 + chr3R_4_1440001 chr3R_1440001 RAL-320 1964 chr3R 1867171 1867174 chr3R 1954887 1954930 Doc3-element 6 87737 13.0 6.5 9.8 0.6 87759 chr3R 1867171 intron CG42623 + chr3R 1911050 intron CG42623 + chr3R 1954930 intergenic not near genes chr3R_6_1910001 chr3R_1910001 RAL-320 1965 chr3R 1939042 1939083 chr3R 1939150 1939197 10 112 2.0 4.5 3.2 2.4 155 chr3R 1939042 intergenic not near genes chr3R 1939120 intergenic not near genes chr3R 1939197 intergenic not near genes chr3R_10_1935001 chr3R_1935001 RAL-320 1966 chr3R 2534149 2534159 chr3R 2541707 2541726 4 7573 13.5 15.5 14.5 0.3 7577 chr3R 2534149 intergenic not near genes chr3R 2537938 intergenic not near genes chr3R 2541726 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-320 1967 chr3R 3267253 3267263 chr3R 3267440 3267445 4 182 24.0 14.0 19.0 0.2 192 chr3R 3267253 intergenic not near genes chr3R 3267349 intergenic not near genes chr3R 3267445 intergenic not near genes chr3R_4_3265001 chr3R_3265001 RAL-320 1968 chr3R 3752733 3752760 chr3R 3752826 3752853 11 94 3.5 3.0 3.2 2.6 120 chr3R 3752733 intergenic CG41128 + chr3R 3752793 intergenic CG41128 + chr3R 3752853 intergenic CG41128 + chr3R_11_3750001 chr3R_3750001 RAL-320 1969 chr3R 4012485 4012533 chr3R 4012594 4012610 8 101 4.0 2.5 3.2 1.9 125 chr3R 4012485 intergenic not near genes chr3R 4012548 intergenic not near genes chr3R 4012610 intergenic not near genes chr3R_8_4010001 chr3R_4010001 RAL-320 1970 chr3R 4063794 4063821 chr3R 4069094 4069101 6 5293 7.5 10.5 9.0 0.6 5307 chr3R 4063794 intergenic not near genes chr3R 4066448 intergenic not near genes chr3R 4069101 intergenic not near genes chr3R_6_4065001 chr3R_4065001 RAL-320 1971 chr3R 4105024 4105059 chr3R 4110248 4110267 copia 5 5221 5.0 5.5 5.2 0.8 5243 chr3R 4105024 intergenic not near genes chr3R 4107646 intergenic not near genes chr3R 4110267 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-320 1972 chr3R 4206058 4206104 chr3R 4211648 4211678 mdg3 13 5589 4.0 4.5 4.2 2.5 5620 chr3R 4206058 intron CG14636 - chr3R 4208868 intron CG14636 - chr3R 4211678 intron CG14636 - chr3R_13_4205001 chr3R_4205001 RAL-320 1973 chr3R 4366755 4366788 chr3R 4375138 4375191 roo 18 8396 4.5 3.0 3.8 3.8 8436 chr3R 4366755 3` UTR CG1090 + chr3R 4370973 intergenic not near genes chr3R 4375191 5` UTR CR44922 + chr3R_18_4370001 chr3R_4370001 RAL-320 1974 chr3R 4408408 4408424 chr3R 4412722 4412748 Juan 6 4320 12.5 9.0 10.8 0.5 4340 chr3R 4408408 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412748 intron CG32944 - chr3R_6_4410001 chr3R_4410001 RAL-320 1975 chr3R 4408426 4408440 chr3R 4412710 4412759 Juan 10 4304 8.5 5.0 6.8 1.3 4333 chr3R 4408426 intron CG32944 - chr3R 4410592 intron CG32944 - chr3R 4412759 intron CG32944 - chr3R_10_4410001 chr3R_4410001 RAL-320 1976 chr3R 4420782 4420835 chr3R 4420878 4420931 17 91 3.5 4.5 4.0 3.4 149 chr3R 4420782 intergenic not near genes chr3R 4420856 intergenic not near genes chr3R 4420931 intergenic not near genes chr3R_17_4420001 chr3R_4420001 RAL-320 1977 chr3R 4527563 4527612 chr3R 4528133 4528182 17 566 4.5 2.5 3.5 3.8 619 chr3R 4527563 intron CG34357 - chr3R 4527872 intron CG34357 - chr3R 4528182 intron CG34357 - chr3R_17_4525001 chr3R_4525001 RAL-320 1978 chr3R 4753227 4753277 chr3R 4757550 4757572 F-element 15 4318 6.0 6.0 6.0 2.1 4345 chr3R 4753227 intron,intron atms +,CG44098 - chr3R 4755400 intron,intron atms +,CG44098 - chr3R 4757572 intron,exon atms +,CG44098 - chr3R_15_4755001 chr3R_4755001 RAL-320 1979 chr3R 4861555 4861598 chr3R 4861647 4861664 11 82 3.5 3.0 3.2 2.6 109 chr3R 4861555 intron opa + chr3R 4861610 intron opa + chr3R 4861664 intron opa + chr3R_11_4860001 chr3R_4860001 RAL-320 1980 chr3R 4887460 4887512 chr3R 4894857 4894909 rover 11 7385 2.5 4.0 3.2 2.6 7449 chr3R 4887460 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894909 intergenic not near genes chr3R_11_4890001 chr3R_4890001 RAL-320 1981 chr3R 4948360 4948390 chr3R 4949002 4949032 10 640 31.5 27.5 29.5 0.3 672 chr3R 4948360 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949032 3` UTR UbcD6 - chr3R_10_4945001 chr3R_4945001 RAL-320 1982 chr3R 4965988 4966036 chr3R 4966100 4966148 19 106 5.5 5.5 5.5 2.9 160 chr3R 4965988 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966148 intron CG1124 + chr3R_19_4965001 chr3R_4965001 RAL-320 1983 chr3R 4998378 4998383 chr3R 4998499 4998505 6 122 9.0 12.5 10.8 0.5 127 chr3R 4998378 intron CG2022 - chr3R 4998442 intron CG2022 - chr3R 4998505 intron CG2022 - chr3R_6_4995001 chr3R_4995001 RAL-320 1984 chr3R 5000272 5000288 chr3R 5000399 5000415 11 126 5.0 3.5 4.2 2.1 143 chr3R 5000272 intron CG2022 - chr3R 5000344 intron CG2022 - chr3R 5000415 intron CG2022 - chr3R_11_5000001 chr3R_5000001 RAL-320 1985 chr3R 5000295 5000317 chr3R 5000396 5000430 10 118 2.0 3.5 2.8 2.6 135 chr3R 5000295 intron CG2022 - chr3R 5000362 intron CG2022 - chr3R 5000430 intron CG2022 - chr3R_10_5000001 chr3R_5000001 RAL-320 1986 chr3R 5038726 5038755 chr3R 5038826 5038855 10 99 12.5 8.0 10.2 0.9 129 chr3R 5038726 intergenic not near genes chr3R 5038790 intergenic not near genes chr3R 5038855 intergenic not near genes chr3R_10_5035001 chr3R_5035001 RAL-320 1987 chr3R 5038756 5038774 chr3R 5038823 5038840 14 87 8.0 8.5 8.2 1.5 84 chr3R 5038756 intergenic not near genes chr3R 5038798 intergenic not near genes chr3R 5038840 intergenic not near genes chr3R_14_5035001 chr3R_5035001 RAL-320 1988 chr3R 5045823 5045876 chr3R 5052945 5052998 HMS-Beagle 20 7119 5.0 3.5 4.2 3.8 7175 chr3R 5045823 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052998 intergenic CR45588 - chr3R_20_5045001 chr3R_5045001 RAL-320 1989 chr3R 5055345 5055393 chr3R 5055579 5055627 17 227 4.5 3.5 4.0 3.4 282 chr3R 5055345 intergenic not near genes chr3R 5055486 intergenic not near genes chr3R 5055627 intergenic not near genes chr3R_17_5055001 chr3R_5055001 RAL-320 1990 chr3R 5067961 5068006 chr3R 5073498 5073543 mdg3 16 5537 6.5 4.5 5.5 2.5 5582 chr3R 5067961 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073543 intergenic not near genes chr3R_16_5070001 chr3R_5070001 RAL-320 1991 chr3R 5236220 5236243 chr3R 5236368 5236386 14 145 3.0 7.0 5.0 2.3 166 chr3R 5236220 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236303 3` UTR rtp - chr3R 5236386 3` UTR rtp - chr3R_14_5235001 chr3R_5235001 RAL-320 1992 chr3R 5250894 5250911 chr3R 5250996 5251041 8 125 3.5 3.0 3.2 1.9 147 chr3R 5250894 intron CG12163 - chr3R 5250968 intron CG12163 - chr3R 5251041 intron CG12163 - chr3R_8_5250001 chr3R_5250001 RAL-320 1993 chr3R 5278075 5278090 chr3R 5278176 5278191 6 99 11.0 8.0 9.5 0.6 116 chr3R 5278075 intron mtd - chr3R 5278133 intron mtd - chr3R 5278191 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-320 1994 chr3R 5278091 5278119 chr3R 5278170 5278220 11 97 4.0 5.5 4.8 1.9 129 chr3R 5278091 intron mtd - chr3R 5278156 intron mtd - chr3R 5278220 intron mtd - chr3R_11_5275001 chr3R_5275001 RAL-320 1995 chr3R 5338382 5338427 chr3R 5343579 5343599 Rt1c 18 5190 7.5 10.5 9.0 1.8 5217 chr3R 5338382 intron mtd - chr3R 5340990 intron mtd - chr3R 5343599 intron mtd - chr3R_18_5340001 chr3R_5340001 RAL-320 1996 chr3R 5385964 5386007 chr3R 5386145 5386192 18 186 4.0 6.0 5.0 3.0 228 chr3R 5385964 intron kkv - chr3R 5386078 intron kkv - chr3R 5386192 intron kkv - chr3R_18_5385001 chr3R_5385001 RAL-320 1997 chr3R 5445941 5445992 chr3R 5452421 5452472 Burdock 27 6480 6.0 4.5 5.2 4.4 6531 chr3R 5445941 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452472 intron CG14669 + chr3R_27_5445001 chr3R_5445001 RAL-320 1998 chr3R 5696139 5696143 chr3R 5696233 5696259 4 100 4.0 6.0 5.0 0.7 120 chr3R 5696139 intron plx + chr3R 5696199 intron plx + chr3R 5696259 intron plx + chr3R_4_5695001 chr3R_5695001 RAL-320 1999 chr3R 5712063 5712114 chr3R 5712171 5712222 17 104 5.5 8.0 6.8 2.2 159 chr3R 5712063 3` UTR plx + chr3R 5712142 3` UTR plx + chr3R 5712222 3` UTR plx + chr3R_17_5710001 chr3R_5710001 RAL-320 2000 chr3R 5746001 5746005 chr3R 5746262 5746266 pogo 4 261 7.5 6.0 6.8 0.5 265 chr3R 5746001 3` UTR Madm + chr3R 5746134 3` UTR Madm + chr3R 5746266 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-320 2001 chr3R 5746008 5746045 chr3R 5746260 5746306 pogo 15 258 4.0 6.0 5.0 2.5 298 chr3R 5746008 3` UTR Madm + chr3R 5746157 3` UTR Madm + chr3R 5746306 3` UTR Madm + chr3R_15_5745001 chr3R_5745001 RAL-320 2002 chr3R 5746994 5747039 chr3R 5753205 5753250 diver 25 6207 5.5 5.0 5.2 4.0 6256 chr3R 5746994 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753250 intergenic CG2091 - chr3R_25_5750001 chr3R_5750001 RAL-320 2003 chr3R 5765610 5765648 chr3R 5765713 5765741 8 97 10.5 8.0 9.2 0.8 131 chr3R 5765610 intron CG2082 - chr3R 5765676 intron CG2082 - chr3R 5765741 intron CG2082 - chr3R_8_5765001 chr3R_5765001 RAL-320 2004 chr3R 5769214 5769228 chr3R 5769332 5769346 5 118 11.5 2.5 7.0 0.6 132 chr3R 5769214 intron CG2082 - chr3R 5769280 intron CG2082 - chr3R 5769346 intron CG2082 - chr3R_5_5765001 chr3R_5765001 RAL-320 2005 chr3R 5769233 5769254 chr3R 5769331 5769372 6 114 4.0 2.0 3.0 1.5 139 chr3R 5769233 intron CG2082 - chr3R 5769302 intron CG2082 - chr3R 5769372 intron CG2082 - chr3R_6_5765001 chr3R_5765001 RAL-320 2006 chr3R 5772355 5772409 chr3R 5772533 5772584 19 173 3.5 1.5 2.5 5.4 229 chr3R 5772355 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772584 intron CG2082 - chr3R_19_5770001 chr3R_5770001 RAL-320 2007 chr3R 5775920 5775941 chr3R 5776563 5776609 7 654 9.5 3.5 6.5 0.9 689 chr3R 5775920 intron CG2082 - chr3R 5776264 intron CG2082 - chr3R 5776609 intron CG2082 - chr3R_7_5775001 chr3R_5775001 RAL-320 2008 chr3R 5809103 5809140 chr3R 5809364 5809391 pogo 5 258 6.0 7.5 6.8 0.6 288 chr3R 5809103 3` UTR CG11000 + chr3R 5809247 3` UTR CG11000 + chr3R 5809391 3` UTR CG11000 + chr3R_5_5805001 chr3R_5805001 RAL-320 2009 chr3R 5822362 5822391 chr3R 5823549 5823578 1360 12 1187 8.0 8.5 8.2 1.3 1216 chr3R 5822362 3` UTR CG2023 - chr3R 5822970 3` UTR CG2023 - chr3R 5823578 3` UTR CG2023 - chr3R_12_5820001 chr3R_5820001 RAL-320 2010 chr3R 5822394 5822397 chr3R 5823581 5823584 1360 4 1186 7.0 13.5 10.2 0.4 1190 chr3R 5822394 3` UTR CG2023 - chr3R 5822989 3` UTR CG2023 - chr3R 5823584 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-320 2011 chr3R 5822399 5822406 chr3R 5823572 5823587 1360 4 1179 5.5 12.0 8.8 0.4 1188 chr3R 5822399 3` UTR CG2023 - chr3R 5822993 3` UTR CG2023 - chr3R 5823587 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-320 2012 chr3R 5927545 5927584 chr3R 5927805 5927844 pogo 19 256 7.0 6.5 6.8 2.4 299 chr3R 5927545 intron CG34113 - chr3R 5927694 intron CG34113 - chr3R 5927844 intron CG34113 - chr3R_19_5925001 chr3R_5925001 RAL-320 2013 chr3R 5931845 5931884 chr3R 5931924 5931962 12 72 4.5 3.0 3.8 2.5 117 chr3R 5931845 intron CG34113 - chr3R 5931904 intron CG34113 - chr3R 5931962 intron CG34113 - chr3R_12_5930001 chr3R_5930001 RAL-320 2014 chr3R 5954332 5954356 chr3R 5954402 5954428 14 89 5.0 4.5 4.8 2.4 96 chr3R 5954332 intron CG34113 - chr3R 5954380 intron CG34113 - chr3R 5954428 intron CG34113 - chr3R_14_5950001 chr3R_5950001 RAL-320 2015 chr3R 5968159 5968197 chr3R 5968258 5968297 14 94 6.0 3.5 4.8 2.4 138 chr3R 5968159 intergenic not near genes chr3R 5968228 intergenic not near genes chr3R 5968297 intergenic not near genes chr3R_14_5965001 chr3R_5965001 RAL-320 2016 chr3R 5989313 5989366 chr3R 5989416 5989460 6 98 4.5 5.0 4.8 1.0 147 chr3R 5989313 5` UTR CR44927 + chr3R 5989386 5` UTR CR44927 + chr3R 5989460 5` UTR CR44927 + chr3R_6_5985001 chr3R_5985001 RAL-320 2017 chr3R 6015568 6015575 chr3R 6015665 6015672 4 96 0.0 11.5 5.8 0.6 104 chr3R 6015568 intergenic not near genes chr3R 6015620 intergenic not near genes chr3R 6015672 intergenic not near genes chr3R_4_6015001 chr3R_6015001 RAL-320 2018 chr3R 6015961 6015993 chr3R 6024472 6024498 Tirant 6 8511 1.0 2.0 1.5 2.4 8537 chr3R 6015961 intergenic not near genes chr3R 6020230 intergenic not near genes chr3R 6024498 intergenic not near genes chr3R_6_6020001 chr3R_6020001 RAL-320 2019 chr3R 6051877 6051909 chr3R 6051961 6052010 14 90 4.0 2.0 3.0 3.5 133 chr3R 6051877 intergenic not near genes chr3R 6051944 intergenic not near genes chr3R 6052010 intergenic not near genes chr3R_14_6050001 chr3R_6050001 RAL-320 2020 chr3R 6119109 6119153 chr3R 6119215 6119259 14 106 1.0 4.0 2.5 4.0 150 chr3R 6119109 intergenic not near genes chr3R 6119184 intergenic not near genes chr3R 6119259 intergenic not near genes chr3R_14_6115001 chr3R_6115001 RAL-320 2021 chr3R 6158488 6158530 chr3R 6167091 6167122 Tirant 4 8591 5.5 4.0 4.8 0.7 8634 chr3R 6158488 intergenic not near genes chr3R 6162805 intergenic not near genes chr3R 6167122 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-320 2022 chr3R 6171129 6171181 chr3R 6171511 6171563 18 382 0.5 2.5 1.5 7.2 434 chr3R 6171129 intergenic not near genes chr3R 6171346 intergenic not near genes chr3R 6171563 intergenic not near genes chr3R_18_6170001 chr3R_6170001 RAL-320 2023 chr3R 6175160 6175200 chr3R 6182452 6182492 HMS-Beagle2 14 7283 3.5 3.5 3.5 3.1 7332 chr3R 6175160 intergenic Osi1 + chr3R 6178826 intron CR45194 + chr3R 6182492 intergenic CR45194 + chr3R_14_6175001 chr3R_6175001 RAL-320 2024 chr3R 6283285 6283337 chr3R 6283392 6283429 14 104 4.0 4.0 4.0 2.8 144 chr3R 6283285 intergenic not near genes chr3R 6283357 intergenic not near genes chr3R 6283429 intergenic not near genes chr3R_14_6280001 chr3R_6280001 RAL-320 2025 chr3R 6310618 6310630 chr3R 6310876 6310878 5 256 11.5 7.0 9.2 0.5 260 chr3R 6310618 exon CG31560 + chr3R 6310748 exon CG31560 + chr3R 6310878 exon CG31560 + chr3R_5_6310001 chr3R_6310001 RAL-320 2026 chr3R 6316771 6316779 chr3R 6316884 6316892 4 112 11.0 8.5 9.8 0.4 121 chr3R 6316771 intron Osi17 + chr3R 6316832 intron Osi17 + chr3R 6316892 intron Osi17 + chr3R_4_6315001 chr3R_6315001 RAL-320 2027 chr3R 6316781 6316805 chr3R 6316869 6316914 14 103 5.5 4.5 5.0 2.3 133 chr3R 6316781 intron Osi17 + chr3R 6316848 intron Osi17 + chr3R 6316914 intron Osi17 + chr3R_14_6315001 chr3R_6315001 RAL-320 2028 chr3R 6439127 6439133 chr3R 6439226 6439229 4 98 5.0 14.0 9.5 0.4 102 chr3R 6439127 intron gpp + chr3R 6439178 intron gpp + chr3R 6439229 intron gpp + chr3R_4_6435001 chr3R_6435001 RAL-320 2029 chr3R 6461557 6461611 chr3R 6461658 6461692 18 98 4.0 2.0 3.0 4.5 135 chr3R 6461557 intergenic not near genes chr3R 6461624 intergenic not near genes chr3R 6461692 intergenic not near genes chr3R_18_6460001 chr3R_6460001 RAL-320 2030 chr3R 6510016 6510052 chr3R 6515117 6515153 jockey 11 5099 6.5 3.0 4.8 1.9 5137 chr3R 6510016 intergenic not near genes chr3R 6512584 intergenic not near genes chr3R 6515153 intergenic not near genes chr3R_11_6510001 chr3R_6510001 RAL-320 2031 chr3R 6523298 6523307 chr3R 6523694 6523695 6 394 9.5 6.5 8.0 0.7 397 chr3R 6523298 intergenic not near genes chr3R 6523496 intergenic not near genes chr3R 6523695 intergenic not near genes chr3R_6_6520001 chr3R_6520001 RAL-320 2032 chr3R 6523315 6523350 chr3R 6523690 6523721 10 388 4.0 5.5 4.8 1.7 406 chr3R 6523315 intergenic not near genes chr3R 6523518 intergenic not near genes chr3R 6523721 intergenic not near genes chr3R_10_6520001 chr3R_6520001 RAL-320 2033 chr3R 6526845 6526868 chr3R 6526966 6526980 9 121 2.5 3.5 3.0 2.2 135 chr3R 6526845 intergenic not near genes chr3R 6526912 intergenic not near genes chr3R 6526980 intergenic not near genes chr3R_9_6525001 chr3R_6525001 RAL-320 2034 chr3R 6717701 6717704 chr3R 6717838 6717861 4 151 1.0 6.5 3.8 0.8 160 chr3R 6717701 intron pb - chr3R 6717781 intron pb - chr3R 6717861 intron pb - chr3R_4_6715001 chr3R_6715001 RAL-320 2035 chr3R 6737486 6737527 chr3R 6739292 6739334 Doc 9 1804 1.0 2.5 1.8 3.2 1848 chr3R 6737486 intron pb - chr3R 6738410 intron pb - chr3R 6739334 intron pb - chr3R_9_6735001 chr3R_6735001 RAL-320 2036 chr3R 6780428 6780482 chr3R 6780531 6780585 13 101 3.5 4.5 4.0 2.6 157 chr3R 6780428 intergenic not near genes chr3R 6780506 intergenic not near genes chr3R 6780585 intergenic not near genes chr3R_13_6780001 chr3R_6780001 RAL-320 2037 chr3R 6782434 6782462 chr3R 6782518 6782561 8 97 6.0 6.5 6.2 1.1 127 chr3R 6782434 intergenic not near genes chr3R 6782498 intergenic not near genes chr3R 6782561 intergenic not near genes chr3R_8_6780001 chr3R_6780001 RAL-320 2038 chr3R 6807245 6807296 chr3R 6807346 6807394 20 101 4.0 6.0 5.0 3.3 149 chr3R 6807245 intergenic not near genes chr3R 6807320 intergenic not near genes chr3R 6807394 intergenic not near genes chr3R_20_6805001 chr3R_6805001 RAL-320 2039 chr3R 6828006 6828037 chr3R 6828102 6828133 14 96 3.0 5.0 4.0 2.8 127 chr3R 6828006 intron Scr - chr3R 6828070 intron Scr - chr3R 6828133 intron Scr - chr3R_14_6825001 chr3R_6825001 RAL-320 2040 chr3R 6856363 6856400 chr3R 6856500 6856537 15 136 3.5 2.5 3.0 3.8 174 chr3R 6856363 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856537 intergenic not near genes chr3R_15_6855001 chr3R_6855001 RAL-320 2041 chr3R 6862200 6862247 chr3R 6862306 6862339 16 101 3.5 3.5 3.5 3.6 139 chr3R 6862200 intergenic not near genes chr3R 6862270 intergenic not near genes chr3R 6862339 intergenic not near genes chr3R_16_6860001 chr3R_6860001 RAL-320 2042 chr3R 6912100 6912112 chr3R 6912231 6912243 5 131 7.0 0.0 3.5 1.1 143 chr3R 6912100 intron Antp - chr3R 6912172 intron Antp - chr3R 6912243 intron Antp - chr3R_5_6910001 chr3R_6910001 RAL-320 2043 chr3R 6923586 6923616 chr3R 6923672 6923718 6 96 1.5 7.0 4.2 1.2 132 chr3R 6923586 intron Antp - chr3R 6923652 intron Antp - chr3R 6923718 intron Antp - chr3R_6_6920001 chr3R_6920001 RAL-320 2044 chr3R 6961168 6961185 chr3R 6961267 6961284 6 97 4.5 8.0 6.2 0.8 116 chr3R 6961168 intron Antp - chr3R 6961226 intron Antp - chr3R 6961284 intron Antp - chr3R_6_6960001 chr3R_6960001 RAL-320 2045 chr3R 6961186 6961203 chr3R 6961258 6961283 10 94 3.5 6.5 5.0 1.7 97 chr3R 6961186 intron Antp - chr3R 6961234 intron Antp - chr3R 6961283 intron Antp - chr3R_10_6960001 chr3R_6960001 RAL-320 2046 chr3R 7012210 7012234 chr3R 7012283 7012308 9 81 1.0 8.0 4.5 1.6 98 chr3R 7012210 intergenic not near genes chr3R 7012259 intergenic not near genes chr3R 7012308 intergenic not near genes chr3R_9_7010001 chr3R_7010001 RAL-320 2047 chr3R 7051106 7051147 chr3R 7051203 7051234 18 96 2.5 6.0 4.2 3.5 128 chr3R 7051106 intergenic not near genes chr3R 7051170 intergenic not near genes chr3R 7051234 intergenic not near genes chr3R_18_7050001 chr3R_7050001 RAL-320 2048 chr3R 7103910 7103926 chr3R 7104029 7104045 4 116 9.5 5.5 7.5 0.5 135 chr3R 7103910 intron Alh - chr3R 7103978 intron Alh - chr3R 7104045 intron Alh - chr3R_4_7100001 chr3R_7100001 RAL-320 2049 chr3R 7103928 7103955 chr3R 7104027 7104074 7 116 5.5 5.5 5.5 1.1 146 chr3R 7103928 intron Alh - chr3R 7104001 intron Alh - chr3R 7104074 intron Alh - chr3R_7_7100001 chr3R_7100001 RAL-320 2050 chr3R 7106511 7106537 chr3R 7106612 7106635 6 100 4.5 3.5 4.0 1.2 124 chr3R 7106511 intron Alh - chr3R 7106573 intron Alh - chr3R 7106635 intron Alh - chr3R_6_7105001 chr3R_7105001 RAL-320 2051 chr3R 7121712 7121737 chr3R 7121822 7121850 7 113 0.5 5.0 2.8 1.8 138 chr3R 7121712 exon Alh - chr3R 7121781 intron Alh - chr3R 7121850 intron Alh - chr3R_7_7120001 chr3R_7120001 RAL-320 2052 chr3R 7173678 7173710 chr3R 7173760 7173799 9 94 3.0 5.0 4.0 1.8 121 chr3R 7173678 intron sas + chr3R 7173738 intron sas + chr3R 7173799 intron sas + chr3R_9_7170001 chr3R_7170001 RAL-320 2053 chr3R 7404960 7404972 chr3R 7405039 7405068 4 92 0.0 3.0 1.5 1.6 108 chr3R 7404960 intergenic not near genes chr3R 7405014 intergenic not near genes chr3R 7405068 intergenic not near genes chr3R_4_7405001 chr3R_7405001 RAL-320 2054 chr3R 7481809 7481861 chr3R 7481907 7481917 16 82 4.0 3.0 3.5 3.6 108 chr3R 7481809 intergenic not near genes chr3R 7481863 intergenic not near genes chr3R 7481917 intergenic not near genes chr3R_16_7480001 chr3R_7480001 RAL-320 2055 chr3R 7503749 7503797 chr3R 7503884 7503932 19 133 5.0 2.5 3.8 4.0 183 chr3R 7503749 intron alpha-Est9 - chr3R 7503840 intron alpha-Est9 - chr3R 7503932 intron alpha-Est9 - chr3R_19_7500001 chr3R_7500001 RAL-320 2056 chr3R 7619089 7619125 chr3R 7623583 7623629 14 4500 34.5 29.5 32.0 0.4 4540 chr3R 7619089 intron CG34127 - chr3R 7621359 intron CG34127 - chr3R 7623629 intron CG34127 - chr3R_14_7620001 chr3R_7620001 RAL-320 2057 chr3R 7639767 7639819 chr3R 7639928 7639980 17 153 2.5 6.5 4.5 3.1 213 chr3R 7639767 intergenic CG34127 - chr3R 7639874 intergenic CG34127 - chr3R 7639980 intergenic not near genes chr3R_17_7635001 chr3R_7635001 RAL-320 2058 chr3R 7660763 7660814 chr3R 7660873 7660920 12 110 5.0 2.5 3.8 2.5 157 chr3R 7660763 intron Nlg1 + chr3R 7660842 intron Nlg1 + chr3R 7660920 intron Nlg1 + chr3R_12_7660001 chr3R_7660001 RAL-320 2059 chr3R 7694568 7694609 chr3R 7713649 7713690 invader3 11 19081 3.0 6.0 4.5 2.0 19122 chr3R 7694568 3` UTR Nlg1 + chr3R 7704129 intergenic not near genes chr3R 7713690 intergenic not near genes chr3R_11_7700001 chr3R_7700001 RAL-320 2060 chr3R 7729476 7729496 chr3R 7737402 7737454 Stalker2 6 7951 7.0 6.0 6.5 0.8 7978 chr3R 7729476 intergenic not near genes chr3R 7733465 intergenic not near genes chr3R 7737454 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-320 2061 chr3R 7760235 7760287 chr3R 7760764 7760800 17 526 5.5 5.5 5.5 2.6 565 chr3R 7760235 intron Sp7 + chr3R 7760518 intron Sp7 + chr3R 7760800 5` UTR Sp7 + chr3R_17_7760001 chr3R_7760001 RAL-320 2062 chr3R 7773128 7773176 chr3R 7773235 7773285 14 104 7.0 3.5 5.2 2.3 157 chr3R 7773128 intergenic not near genes chr3R 7773206 intergenic not near genes chr3R 7773285 intergenic not near genes chr3R_14_7770001 chr3R_7770001 RAL-320 2063 chr3R 7814024 7814052 chr3R 7814194 7814231 9 179 5.5 4.0 4.8 1.6 207 chr3R 7814024 intergenic CG34384 + chr3R 7814128 intergenic CG34384 + chr3R 7814231 intergenic CG34384 + chr3R_9_7810001 chr3R_7810001 RAL-320 2064 chr3R 7822366 7822380 chr3R 7822461 7822476 8 96 12.5 5.0 8.8 0.8 110 chr3R 7822366 intron CG34384 + chr3R 7822421 intron CG34384 + chr3R 7822476 intron CG34384 + chr3R_8_7820001 chr3R_7820001 RAL-320 2065 chr3R 7822383 7822404 chr3R 7822449 7822470 10 79 7.0 6.5 6.8 1.3 87 chr3R 7822383 intron CG34384 + chr3R 7822426 intron CG34384 + chr3R 7822470 intron CG34384 + chr3R_10_7820001 chr3R_7820001 RAL-320 2066 chr3R 7940107 7940138 chr3R 7940205 7940236 6 96 3.5 4.0 3.8 1.2 129 chr3R 7940107 intron dsx - chr3R 7940172 intron dsx - chr3R 7940236 intron dsx - chr3R_6_7940001 chr3R_7940001 RAL-320 2067 chr3R 7940140 7940144 chr3R 7940190 7940212 4 75 3.5 3.5 3.5 0.9 72 chr3R 7940140 intron dsx - chr3R 7940176 intron dsx - chr3R 7940212 intron dsx - chr3R_4_7940001 chr3R_7940001 RAL-320 2068 chr3R 8042098 8042121 chr3R 8042245 8042268 5 145 5.5 5.5 5.5 0.8 170 chr3R 8042098 intron CG43060 + chr3R 8042183 intron CG43060 + chr3R 8042268 intron CG43060 + chr3R_5_8040001 chr3R_8040001 RAL-320 2069 chr3R 8049378 8049393 chr3R 8049586 8049601 8 208 3.5 11.5 7.5 0.9 223 chr3R 8049378 intron,exon CG43060 +,CG43618 + chr3R 8049490 intron CG43060 + chr3R 8049601 intron CG43060 + chr3R_8_8045001 chr3R_8045001 RAL-320 2070 chr3R 8082567 8082594 chr3R 8082664 8082691 14 97 9.0 12.5 10.8 1.2 124 chr3R 8082567 intron mAChR-B + chr3R 8082629 intron mAChR-B + chr3R 8082691 intron mAChR-B + chr3R_14_8080001 chr3R_8080001 RAL-320 2071 chr3R 8094393 8094437 chr3R 8099718 8099757 Transpac 14 5324 3.5 7.5 5.5 2.2 5364 chr3R 8094393 intron CG7900 + chr3R 8097075 intron CG7900 + chr3R 8099757 intron CG7900 + chr3R_14_8095001 chr3R_8095001 RAL-320 2072 chr3R 8101757 8101791 chr3R 8104856 8104895 G2 11 3101 3.5 5.0 4.2 2.1 3138 chr3R 8101757 exon CG7900 + chr3R 8103326 intron CG7900 + chr3R 8104895 3` UTR CG7900 + chr3R_11_8100001 chr3R_8100001 RAL-320 2073 chr3R 8207545 8207582 chr3R 8208405 8208438 F-element 4 855 3.5 5.0 4.2 0.8 893 chr3R 8207545 intergenic not near genes chr3R 8207992 intergenic not near genes chr3R 8208438 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-320 2074 chr3R 8339246 8339247 chr3R 21907534 21907536 13 13568289 25.5 20.0 22.8 0.5 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_13_15120001 chr3R_15120001 RAL-320 2075 chr3R 8402995 8403034 chr3R 8412172 8412213 roo 15 9177 3.5 5.5 4.5 2.7 9218 chr3R 8402995 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412213 intron CG45263 - chr3R_15_8405001 chr3R_8405001 RAL-320 2076 chr3R 8570475 8570510 chr3R 8575113 8575156 HMS-Beagle 10 4638 1.0 3.5 2.2 3.1 4681 chr3R 8570475 intergenic not near genes chr3R 8572816 intergenic not near genes chr3R 8575156 intergenic not near genes chr3R_10_8570001 chr3R_8570001 RAL-320 2077 chr3R 8601754 8601773 chr3R 8610927 8610946 roo 6 9173 10.0 8.5 9.2 0.6 9192 chr3R 8601754 intron 5-HT2B + chr3R 8606350 intron 5-HT2B + chr3R 8610946 intron 5-HT2B + chr3R_6_8605001 chr3R_8605001 RAL-320 2078 chr3R 8601776 8601800 chr3R 8610919 8610936 roo 8 9150 5.0 6.0 5.5 1.2 9160 chr3R 8601776 intron 5-HT2B + chr3R 8606356 intron 5-HT2B + chr3R 8610936 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 RAL-320 2079 chr3R 8614791 8614812 chr3R 8614994 8615035 10 215 0.0 7.0 3.5 2.2 244 chr3R 8614791 intron 5-HT2B + chr3R 8614913 intron 5-HT2B + chr3R 8615035 intron 5-HT2B + chr3R_10_8610001 chr3R_8610001 RAL-320 2080 chr3R 8685277 8685313 chr3R 8685397 8685433 16 119 7.0 3.5 5.2 2.6 156 chr3R 8685277 intron CR44937 - chr3R 8685355 intron CR44937 - chr3R 8685433 intron CR44937 - chr3R_16_8685001 chr3R_8685001 RAL-320 2081 chr3R 8707355 8707381 chr3R 8709801 8709829 jockey 13 2454 5.0 6.5 5.8 1.9 2474 chr3R 8707355 intergenic not near genes chr3R 8708592 intergenic not near genes chr3R 8709829 intergenic not near genes chr3R_13_8705001 chr3R_8705001 RAL-320 2082 chr3R 9036354 9036401 chr3R 9036452 9036499 19 97 3.0 5.0 4.0 3.8 145 chr3R 9036354 intron neur - chr3R 9036426 intron neur - chr3R 9036499 intron neur - chr3R_19_9035001 chr3R_9035001 RAL-320 2083 chr3R 9101822 9101868 chr3R 9101940 9101986 12 114 4.0 7.5 5.8 1.8 164 chr3R 9101822 intron pum - chr3R 9101904 intron pum - chr3R 9101986 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-320 2084 chr3R 9107442 9107493 chr3R 9107565 9107610 17 119 6.0 3.5 4.8 2.9 168 chr3R 9107442 intron pum - chr3R 9107526 intron pum - chr3R 9107610 intron pum - chr3R_17_9105001 chr3R_9105001 RAL-320 2085 chr3R 9108849 9108883 chr3R 9108945 9108979 7 95 6.5 5.0 5.8 1.0 130 chr3R 9108849 intron pum - chr3R 9108914 intron pum - chr3R 9108979 intron pum - chr3R_7_9105001 chr3R_9105001 RAL-320 2086 chr3R 9127933 9127977 chr3R 9128075 9128118 7 138 6.5 6.0 6.2 1.0 185 chr3R 9127933 intron pum - chr3R 9128026 intron pum - chr3R 9128118 intron pum - chr3R_7_9125001 chr3R_9125001 RAL-320 2087 chr3R 9278767 9278803 chr3R 9284041 9284083 Rt1a 8 5279 6.5 10.5 8.5 0.8 5316 chr3R 9278767 intergenic not near genes chr3R 9281425 intergenic not near genes chr3R 9284083 intergenic not near genes chr3R_8_9280001 chr3R_9280001 RAL-320 2088 chr3R 9294997 9295043 chr3R 9295095 9295141 15 96 6.0 2.5 4.2 2.9 144 chr3R 9294997 3` UTR CG8861 - chr3R 9295069 3` UTR CG8861 - chr3R 9295141 3` UTR CG8861 - chr3R_15_9295001 chr3R_9295001 RAL-320 2089 chr3R 9319557 9319609 chr3R 9320012 9320044 jockey 19 452 5.5 10.5 8.0 2.1 487 chr3R 9319557 intron CG8861 - chr3R 9319800 intron CG8861 - chr3R 9320044 intron CG8861 - chr3R_19_9315001 chr3R_9315001 RAL-320 2090 chr3R 9361820 9361847 chr3R 9362058 9362106 pogo 11 254 3.5 5.5 4.5 2.0 286 chr3R 9361820 3` UTR CG45050 + chr3R 9361963 3` UTR CG45050 + chr3R 9362106 3` UTR CG45050 + chr3R_11_9360001 chr3R_9360001 RAL-320 2091 chr3R 9379123 9379173 chr3R 9379225 9379275 9 102 0.0 3.5 1.8 3.2 152 chr3R 9379123 intron FER - chr3R 9379199 intron FER - chr3R 9379275 intron FER - chr3R_9_9375001 chr3R_9375001 RAL-320 2092 chr3R 9382801 9382844 chr3R 9382946 9382989 11 141 5.0 6.0 5.5 1.7 188 chr3R 9382801 intron FER - chr3R 9382895 intron FER - chr3R 9382989 intron FER - chr3R_11_9380001 chr3R_9380001 RAL-320 2093 chr3R 9390519 9390555 chr3R 9390622 9390659 9 101 4.5 5.0 4.8 1.6 140 chr3R 9390519 intron FER - chr3R 9390589 intron FER - chr3R 9390659 intron FER - chr3R_9_9390001 chr3R_9390001 RAL-320 2094 chr3R 9601456 9601492 chr3R 9601583 9601585 18 132 5.0 6.0 5.5 2.8 129 chr3R 9601456 intron CG8312 + chr3R 9601520 intron CG8312 + chr3R 9601585 intron CG8312 + chr3R_18_9600001 chr3R_9600001 RAL-320 2095 chr3R 9668659 9668698 chr3R 9668757 9668793 14 97 5.0 2.0 3.5 3.1 134 chr3R 9668659 intron CG9492 - chr3R 9668726 intron CG9492 - chr3R 9668793 intron CG9492 - chr3R_14_9665001 chr3R_9665001 RAL-320 2096 chr3R 9699959 9700002 chr3R 9700068 9700073 18 99 4.5 4.5 4.5 3.3 114 chr3R 9699959 intron Unc-115a - chr3R 9700016 intron Unc-115a - chr3R 9700073 intron Unc-115a - chr3R_18_9700001 chr3R_9700001 RAL-320 2097 chr3R 9836885 9836937 chr3R 9836996 9837049 15 108 6.5 5.0 5.8 2.2 164 chr3R 9836885 intron Teh1 - chr3R 9836967 intron Teh1 - chr3R 9837049 intron Teh1 - chr3R_15_9835001 chr3R_9835001 RAL-320 2098 chr3R 9877186 9877229 chr3R 9877282 9877300 8 90 6.0 7.5 6.8 1.0 114 chr3R 9877186 intron,3` UTR Glut4EF +,CR45029 - chr3R 9877243 intron,intron Glut4EF +,CR45029 - chr3R 9877300 intron,intron Glut4EF +,CR45029 - chr3R_8_9875001 chr3R_9875001 RAL-320 2099 chr3R 10073751 10073801 chr3R 10073880 10073930 16 127 3.0 3.5 3.2 3.8 179 chr3R 10073751 3` UTR nerfin-2 + chr3R 10073840 3` UTR CG5361 - chr3R 10073930 exon CG5361 - chr3R_16_10070001 chr3R_10070001 RAL-320 2100 chr3R 10139225 10139247 chr3R 10139323 10139336 6 94 3.0 11.5 7.2 0.7 111 chr3R 10139225 intron tws - chr3R 10139280 intron tws - chr3R 10139336 5` UTR tws - chr3R_6_10135001 chr3R_10135001 RAL-320 2101 chr3R 10231778 10231802 chr3R 10237375 10237399 mdg3 7 5593 8.5 10.0 9.2 0.7 5621 chr3R 10231778 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237399 intron CG42795 + chr3R_7_10230001 chr3R_10230001 RAL-320 2102 chr3R 10231808 10231810 chr3R 10237370 10237407 mdg3 4 5585 8.0 8.5 8.2 0.4 5599 chr3R 10231808 intron CG42795 + chr3R 10234608 intron CG42795 + chr3R 10237407 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-320 2103 chr3R 10255362 10255367 chr3R 10260822 10260827 I-element 4 5460 17.0 6.5 11.8 0.3 5465 chr3R 10255362 3` UTR Sirt6 - chr3R 10258094 intron Sirt6 - chr3R 10260827 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-320 2104 chr3R 10255370 10255381 chr3R 10260818 10260841 I-element 4 5457 14.0 7.0 10.5 0.3 5471 chr3R 10255370 3` UTR Sirt6 - chr3R 10258106 intron Sirt6 - chr3R 10260841 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-320 2105 chr3R 10400266 10400311 chr3R 10400365 10400395 6 96 2.0 4.5 3.2 1.4 129 chr3R 10400266 3` UTR cwo + chr3R 10400330 3` UTR cwo + chr3R 10400395 3` UTR cwo + chr3R_6_10400001 chr3R_10400001 RAL-320 2106 chr3R 10436619 10436670 chr3R 10437063 10437114 18 441 4.5 4.5 4.5 3.3 495 chr3R 10436619 exon Cyp12e1 + chr3R 10436866 intergenic Cyp12e1 + chr3R 10437114 intergenic Cyp12e1 + chr3R_18_10435001 chr3R_10435001 RAL-320 2107 chr3R 10531848 10531895 chr3R 10531949 10531996 13 99 2.5 0.5 1.5 5.2 148 chr3R 10531848 intron hth - chr3R 10531922 intron hth - chr3R 10531996 intron hth - chr3R_13_10530001 chr3R_10530001 RAL-320 2108 chr3R 10535314 10535342 chr3R 10535427 10535455 7 113 5.0 0.0 2.5 2.0 141 chr3R 10535314 intron hth - chr3R 10535384 intron hth - chr3R 10535455 intron hth - chr3R_7_10535001 chr3R_10535001 RAL-320 2109 chr3R 10553813 10553869 chr3R 10553922 10553961 14 96 4.5 7.0 5.8 2.1 148 chr3R 10553813 intron hth - chr3R 10553887 intron hth - chr3R 10553961 intron hth - chr3R_14_10550001 chr3R_10550001 RAL-320 2110 chr3R 10593449 10593454 chr3R 10593539 10593557 4 97 3.5 6.5 5.0 0.7 108 chr3R 10593449 intron hth - chr3R 10593503 intron hth - chr3R 10593557 exon hth - chr3R_4_10590001 chr3R_10590001 RAL-320 2111 chr3R 10641584 10641621 chr3R 10641682 10641717 12 94 2.0 3.0 2.5 3.4 133 chr3R 10641584 5` UTR CR44018 + chr3R 10641650 5` UTR CR44018 + chr3R 10641717 5` UTR CR44018 + chr3R_12_10640001 chr3R_10640001 RAL-320 2112 chr3R 10723743 10723791 chr3R 10723855 10723894 21 107 4.0 0.5 2.2 6.6 151 chr3R 10723743 intergenic not near genes chr3R 10723818 intergenic not near genes chr3R 10723894 intergenic not near genes chr3R_21_10720001 chr3R_10720001 RAL-320 2113 chr3R 10727636 10727646 chr3R 10727725 10727740 4 93 9.5 6.5 8.0 0.4 104 chr3R 10727636 intergenic not near genes chr3R 10727688 intergenic not near genes chr3R 10727740 intergenic not near genes chr3R_4_10725001 chr3R_10725001 RAL-320 2114 chr3R 10727648 10727677 chr3R 10727723 10727777 8 88 3.5 6.5 5.0 1.3 129 chr3R 10727648 intergenic not near genes chr3R 10727712 intergenic not near genes chr3R 10727777 intergenic not near genes chr3R_8_10725001 chr3R_10725001 RAL-320 2115 chr3R 10732314 10732339 chr3R 10733198 10733231 11 890 7.0 5.0 6.0 1.6 917 chr3R 10732314 intergenic not near genes chr3R 10732772 intergenic not near genes chr3R 10733231 intergenic not near genes chr3R_11_10730001 chr3R_10730001 RAL-320 2116 chr3R 10785796 10785839 chr3R 10785890 10785938 13 95 5.0 5.0 5.0 2.2 142 chr3R 10785796 intron Rbp1 + chr3R 10785867 intron Rbp1 + chr3R 10785938 intron Rbp1 + chr3R_13_10785001 chr3R_10785001 RAL-320 2117 chr3R 10804151 10804206 chr3R 10811703 10811753 17.6 20 7549 0.5 2.0 1.2 9.1 7602 chr3R 10804151 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811753 3` UTR CG14693 - chr3R_20_10805001 chr3R_10805001 RAL-320 2118 chr3R 10886855 10886904 chr3R 10886951 10886999 16 96 4.0 4.0 4.0 3.2 144 chr3R 10886855 intron Leash + chr3R 10886927 intron Leash + chr3R 10886999 intron Leash + chr3R_16_10885001 chr3R_10885001 RAL-320 2119 chr3R 10919678 10919716 chr3R 10919776 10919814 7 97 7.5 5.5 6.5 0.9 136 chr3R 10919678 intergenic not near genes chr3R 10919746 intergenic not near genes chr3R 10919814 intergenic not near genes chr3R_7_10915001 chr3R_10915001 RAL-320 2120 chr3R 10920030 10920075 chr3R 10920128 10920173 12 97 3.5 6.0 4.8 2.1 143 chr3R 10920030 intergenic not near genes chr3R 10920102 intergenic not near genes chr3R 10920173 intergenic not near genes chr3R_12_10920001 chr3R_10920001 RAL-320 2121 chr3R 10979640 10979678 chr3R 10979740 10979780 8 100 1.0 6.5 3.8 1.7 140 chr3R 10979640 intron CG34114 + chr3R 10979710 intron CG34114 + chr3R 10979780 intron CG34114 + chr3R_8_10975001 chr3R_10975001 RAL-320 2122 chr3R 10994268 10994310 chr3R 10994367 10994409 5 95 7.0 1.5 4.2 1.0 141 chr3R 10994268 intron CG34114 + chr3R 10994338 intron CG34114 + chr3R 10994409 intron CG34114 + chr3R_5_10990001 chr3R_10990001 RAL-320 2123 chr3R 11065587 11065608 chr3R 11071252 11071282 297 4 5672 1.5 4.0 2.8 1.1 5695 chr3R 11065587 intergenic not near genes chr3R 11068434 intergenic not near genes chr3R 11071282 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-320 2124 chr3R 11102310 11102329 chr3R 11102411 11102430 7 98 10.0 5.5 7.8 0.8 120 chr3R 11102310 intergenic not near genes chr3R 11102370 intergenic not near genes chr3R 11102430 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-320 2125 chr3R 11102331 11102344 chr3R 11102404 11102445 8 89 6.5 3.5 5.0 1.3 114 chr3R 11102331 intergenic not near genes chr3R 11102388 intergenic not near genes chr3R 11102445 intergenic not near genes chr3R_8_11100001 chr3R_11100001 RAL-320 2126 chr3R 11130109 11130144 chr3R 11130205 11130208 7 88 3.0 0.0 1.5 2.8 99 chr3R 11130109 intergenic not near genes chr3R 11130158 intergenic not near genes chr3R 11130208 intergenic not near genes chr3R_7_11130001 chr3R_11130001 RAL-320 2127 chr3R 11174579 11174614 chr3R 11175306 11175348 6 731 26.5 20.5 23.5 0.2 769 chr3R 11174579 exon Ugt86Dj - chr3R 11174964 intron Ugt86Dj - chr3R 11175348 exon Ugt86Dj - chr3R_6_11170001 chr3R_11170001 RAL-320 2128 chr3R 11227898 11227901 chr3R 11231055 11231104 10 3171 24.5 18.5 21.5 0.4 3206 chr3R 11227898 exon CG17726 + chr3R 11229501 exon GCC88 - chr3R 11231104 exon CG17187 - chr3R_10_11225001 chr3R_11225001 RAL-320 2129 chr3R 11242234 11242271 chr3R 11242343 11242380 12 107 6.0 5.0 5.5 1.8 146 chr3R 11242234 3` UTR CG17734 - chr3R 11242307 3` UTR CG17734 - chr3R 11242380 3` UTR CG17734 - chr3R_12_11240001 chr3R_11240001 RAL-320 2130 chr3R 11313211 11313257 chr3R 11313320 11313366 18 105 5.5 3.0 4.2 3.5 155 chr3R 11313211 intergenic not near genes chr3R 11313288 intergenic not near genes chr3R 11313366 intergenic not near genes chr3R_18_11310001 chr3R_11310001 RAL-320 2131 chr3R 11379222 11379252 chr3R 11388394 11388427 roo 9 9173 4.5 4.0 4.2 1.7 9205 chr3R 11379222 intron pros + chr3R 11383824 intron pros + chr3R 11388427 intron pros + chr3R_9_11380001 chr3R_11380001 RAL-320 2132 chr3R 11398711 11398751 chr3R 11398807 11398839 5 94 3.0 1.5 2.2 1.6 128 chr3R 11398711 3` UTR pros + chr3R 11398775 3` UTR pros + chr3R 11398839 3` UTR pros + chr3R_5_11395001 chr3R_11395001 RAL-320 2133 chr3R 11404922 11404972 chr3R 11405022 11405062 20 94 5.0 8.0 6.5 2.7 140 chr3R 11404922 3` UTR pros + chr3R 11404992 3` UTR pros + chr3R 11405062 3` UTR pros + chr3R_20_11400001 chr3R_11400001 RAL-320 2134 chr3R 11408732 11408783 chr3R 11408846 11408897 5 111 5.5 4.5 5.0 0.8 165 chr3R 11408732 3` UTR mRpL40 + chr3R 11408814 3` UTR mgr - chr3R 11408897 3` UTR mgr - chr3R_5_11405001 chr3R_11405001 RAL-320 2135 chr3R 11452061 11452105 chr3R 11452163 11452212 19 101 1.5 3.0 2.2 5.9 151 chr3R 11452061 intron CG17230 + chr3R 11452136 intron CG17230 + chr3R 11452212 intron CG17230 + chr3R_19_11450001 chr3R_11450001 RAL-320 2136 chr3R 11455565 11455612 chr3R 11455711 11455758 15 145 3.5 5.0 4.2 2.9 193 chr3R 11455565 intron,intron CG17230 +,PGRP-LB - chr3R 11455662 intron,intron CG17230 +,PGRP-LB - chr3R 11455758 intron,intron CG17230 +,PGRP-LB - chr3R_15_11455001 chr3R_11455001 RAL-320 2137 chr3R 11460561 11460577 chr3R 11460861 11460877 5 300 6.0 5.5 5.8 0.7 316 chr3R 11460561 intron CG17230 + chr3R 11460719 intron CG17230 + chr3R 11460877 intron CG17230 + chr3R_5_11460001 chr3R_11460001 RAL-320 2138 chr3R 11461255 11461262 chr3R 11461355 11461361 4 100 2.0 2.5 2.2 1.2 106 chr3R 11461255 intron CG17230 + chr3R 11461308 intron CG17230 + chr3R 11461361 intron CG17230 + chr3R_4_11460001 chr3R_11460001 RAL-320 2139 chr3R 11461274 11461303 chr3R 11461354 11461402 6 96 1.0 2.5 1.8 2.1 128 chr3R 11461274 intron CG17230 + chr3R 11461338 intron CG17230 + chr3R 11461402 intron CG17230 + chr3R_6_11460001 chr3R_11460001 RAL-320 2140 chr3R 11476934 11476964 chr3R 11477056 11477086 14 122 4.0 5.0 4.5 2.5 152 chr3R 11476934 intergenic not near genes chr3R 11477010 intergenic not near genes chr3R 11477086 intergenic not near genes chr3R_14_11475001 chr3R_11475001 RAL-320 2141 chr3R 11513840 11513871 chr3R 11513928 11513974 6 92 5.0 5.0 5.0 1.0 134 chr3R 11513840 intergenic not near genes chr3R 11513907 intergenic not near genes chr3R 11513974 intergenic not near genes chr3R_6_11510001 chr3R_11510001 RAL-320 2142 chr3R 11518798 11518843 chr3R 11518909 11518954 14 106 5.5 4.0 4.8 2.4 156 chr3R 11518798 intergenic not near genes chr3R 11518876 intergenic not near genes chr3R 11518954 intergenic not near genes chr3R_14_11515001 chr3R_11515001 RAL-320 2143 chr3R 11545958 11546003 chr3R 11546066 11546112 17 112 5.0 5.5 5.2 2.7 154 chr3R 11545958 intergenic not near genes chr3R 11546035 intergenic not near genes chr3R 11546112 intergenic not near genes chr3R_17_11545001 chr3R_11545001 RAL-320 2144 chr3R 11684369 11684393 chr3R 11684575 11684611 7 216 5.5 4.5 5.0 1.2 242 chr3R 11684369 intergenic CG6830 -,CG6834 - chr3R 11684490 intergenic CG6830 -,CG6834 - chr3R 11684611 intergenic CG6834 -,CG6830 - chr3R_7_11680001 chr3R_11680001 RAL-320 2145 chr3R 11684623 11684665 chr3R 11687760 11687785 14 3137 4.0 2.5 3.2 3.3 3162 chr3R 11684623 intergenic CG6834 -,CG6830 - chr3R 11686204 exon CG6834 - chr3R 11687785 exon CG6834 - chr3R_14_11685001 chr3R_11685001 RAL-320 2146 chr3R 11694710 11694751 chr3R 11694823 11694864 8 112 3.5 6.0 4.8 1.4 154 chr3R 11694710 intergenic Fer3 - chr3R 11694787 intergenic Fer3 - chr3R 11694864 intergenic not near genes chr3R_8_11690001 chr3R_11690001 RAL-320 2147 chr3R 11695720 11695741 chr3R 11695821 11695842 9 100 7.0 6.5 6.8 1.2 122 chr3R 11695720 intergenic not near genes chr3R 11695781 intergenic not near genes chr3R 11695842 intergenic not near genes chr3R_9_11695001 chr3R_11695001 RAL-320 2148 chr3R 11695743 11695770 chr3R 11695819 11695871 14 94 3.0 6.0 4.5 2.5 128 chr3R 11695743 intergenic not near genes chr3R 11695807 intergenic not near genes chr3R 11695871 intergenic not near genes chr3R_14_11695001 chr3R_11695001 RAL-320 2149 chr3R 11734166 11734189 chr3R 11734281 11734316 5 125 4.0 4.5 4.2 1.0 150 chr3R 11734166 intergenic not near genes chr3R 11734241 intergenic not near genes chr3R 11734316 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-320 2150 chr3R 11833118 11833160 chr3R 11833282 11833324 17 158 5.5 5.5 5.5 2.6 206 chr3R 11833118 intron CG6959 - chr3R 11833221 intron CG6959 - chr3R 11833324 intron CG6959 - chr3R_17_11830001 chr3R_11830001 RAL-320 2151 chr3R 11841072 11841096 chr3R 11846256 11846292 BS 7 5197 3.5 8.0 5.8 1.0 5220 chr3R 11841072 intron CG6959 - chr3R 11843682 intron CG6959 - chr3R 11846292 intron CG6959 - chr3R_7_11840001 chr3R_11840001 RAL-320 2152 chr3R 11850319 11850344 chr3R 11850398 11850443 10 97 5.0 2.5 3.8 2.1 124 chr3R 11850319 intron CG6959 - chr3R 11850381 intron CG6959 - chr3R 11850443 intron CG6959 - chr3R_10_11850001 chr3R_11850001 RAL-320 2153 chr3R 11872143 11872189 chr3R 11872279 11872298 9 128 4.0 0.0 2.0 3.0 155 chr3R 11872143 intergenic not near genes chr3R 11872220 intergenic not near genes chr3R 11872298 intergenic not near genes chr3R_9_11870001 chr3R_11870001 RAL-320 2154 chr3R 11920939 11920987 chr3R 11921168 11921219 10 221 4.0 7.5 5.8 1.5 280 chr3R 11920939 intron Cad87A - chr3R 11921079 intron Cad87A - chr3R 11921219 intron Cad87A - chr3R_10_11920001 chr3R_11920001 RAL-320 2155 chr3R 11957842 11957876 chr3R 11958139 11958174 S-element 13 299 2.0 0.0 1.0 6.5 332 chr3R 11957842 intergenic not near genes chr3R 11958008 intergenic not near genes chr3R 11958174 intergenic not near genes chr3R_13_11955001 chr3R_11955001 RAL-320 2156 chr3R 12022878 12022903 chr3R 12025075 12025100 pogo 6 2190 5.0 8.5 6.8 0.8 2222 chr3R 12022878 intergenic not near genes chr3R 12023989 intergenic not near genes chr3R 12025100 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RAL-320 2157 chr3R 12022908 12022913 chr3R 12025066 12025080 pogo 4 2177 3.0 5.0 4.0 0.8 2172 chr3R 12022908 intergenic not near genes chr3R 12023994 intergenic not near genes chr3R 12025080 intergenic not near genes chr3R_4_12020001 chr3R_12020001 RAL-320 2158 chr3R 12081995 12082028 chr3R 12082076 12082102 8 88 1.5 3.5 2.5 2.3 107 chr3R 12081995 intron CG14741 - chr3R 12082048 intron CG14741 - chr3R 12082102 intron CG14741 - chr3R_8_12080001 chr3R_12080001 RAL-320 2159 chr3R 12111906 12111924 chr3R 12111967 12111994 9 88 0.0 4.0 2.0 3.0 88 chr3R 12111906 intergenic dpr17 + chr3R 12111950 intergenic not near genes chr3R 12111994 intergenic not near genes chr3R_9_12110001 chr3R_12110001 RAL-320 2160 chr3R 12154031 12154075 chr3R 12154473 12154486 5 417 31.5 18.0 24.8 0.2 455 chr3R 12154031 intron dpr15 - chr3R 12154258 intron dpr15 - chr3R 12154486 intron dpr15 - chr3R_5_12150001 chr3R_12150001 RAL-320 2161 chr3R 12154027 12154086 chr3R 12154487 12154492 6 431 32.5 16.5 24.5 0.2 465 chr3R 12154027 intron dpr15 - chr3R 12154260 intron dpr15 - chr3R 12154492 intron dpr15 - chr3R_6_12150001 chr3R_12150001 RAL-320 2162 chr3R 12183162 12183205 chr3R 12183268 12183311 12 98 1.5 6.0 3.8 2.5 149 chr3R 12183162 intergenic not near genes chr3R 12183236 intergenic not near genes chr3R 12183311 intergenic not near genes chr3R_12_12180001 chr3R_12180001 RAL-320 2163 chr3R 12267836 12267887 chr3R 12267936 12267987 12 100 3.5 5.0 4.2 2.3 151 chr3R 12267836 intron svp + chr3R 12267912 intron svp + chr3R 12267987 intron svp + chr3R_12_12265001 chr3R_12265001 RAL-320 2164 chr3R 12376184 12376205 chr3R 12376285 12376311 4 100 8.5 6.5 7.5 0.5 127 chr3R 12376184 exon GstD5 + chr3R 12376248 exon GstD5 + chr3R 12376311 exon GstD5 + chr3R_4_12375001 chr3R_12375001 RAL-320 2165 chr3R 12546448 12546484 chr3R 12546534 12546577 12 99 5.0 8.0 6.5 1.6 129 chr3R 12546448 intron Octbeta3R - chr3R 12546512 intron Octbeta3R - chr3R 12546577 intron Octbeta3R - chr3R_12_12545001 chr3R_12545001 RAL-320 2166 chr3R 12720709 12720730 chr3R 12720899 12720920 5 189 12.0 8.5 10.2 0.4 211 chr3R 12720709 intron Men - chr3R 12720814 intron Men - chr3R 12720920 intron Men - chr3R_5_12720001 chr3R_12720001 RAL-320 2167 chr3R 12720733 12720748 chr3R 12720898 12720938 5 179 8.5 8.0 8.2 0.5 205 chr3R 12720733 intron Men - chr3R 12720836 intron Men - chr3R 12720938 intron Men - chr3R_5_12720001 chr3R_12720001 RAL-320 2168 chr3R 12735179 12735181 chr3R 12735434 12735436 4 256 4.0 2.5 3.2 1.0 257 chr3R 12735179 intergenic not near genes chr3R 12735308 intergenic not near genes chr3R 12735436 intergenic not near genes chr3R_4_12735001 chr3R_12735001 RAL-320 2169 chr3R 12735777 12735830 chr3R 12735895 12735923 17 112 1.5 4.0 2.8 4.5 146 chr3R 12735777 intergenic not near genes chr3R 12735850 intergenic not near genes chr3R 12735923 intergenic not near genes chr3R_17_12735001 chr3R_12735001 RAL-320 2170 chr3R 12763119 12763153 chr3R 12763216 12763250 16 96 0.0 5.5 2.8 4.2 131 chr3R 12763119 intron beat-Vc - chr3R 12763184 intron beat-Vc - chr3R 12763250 intron beat-Vc - chr3R_16_12760001 chr3R_12760001 RAL-320 2171 chr3R 12766389 12766436 chr3R 12766492 12766540 8 93 2.5 3.5 3.0 2.0 151 chr3R 12766389 intron beat-Vc - chr3R 12766464 intron beat-Vc - chr3R 12766540 intron beat-Vc - chr3R_8_12765001 chr3R_12765001 RAL-320 2172 chr3R 12819006 12819044 chr3R 12819109 12819147 13 102 2.5 4.5 3.5 2.9 141 chr3R 12819006 intergenic not near genes chr3R 12819076 intergenic not near genes chr3R 12819147 intergenic not near genes chr3R_13_12815001 chr3R_12815001 RAL-320 2173 chr3R 12825806 12825850 chr3R 12825906 12825930 5 90 1.5 2.0 1.8 1.8 124 chr3R 12825806 intergenic not near genes chr3R 12825868 intergenic not near genes chr3R 12825930 intergenic not near genes chr3R_5_12825001 chr3R_12825001 RAL-320 2174 chr3R 12864542 12864592 chr3R 12865047 12865097 roo 8 504 2.5 5.5 4.0 1.6 555 chr3R 12864542 intergenic not near genes chr3R 12864820 intergenic not near genes chr3R 12865097 intergenic not near genes chr3R_8_12860001 chr3R_12860001 RAL-320 2175 chr3R 12866467 12866519 chr3R 12866638 12866690 16 169 2.5 4.5 3.5 3.6 223 chr3R 12866467 intergenic not near genes chr3R 12866578 intergenic not near genes chr3R 12866690 intergenic not near genes chr3R_16_12865001 chr3R_12865001 RAL-320 2176 chr3R 12883776 12883820 chr3R 12883912 12883959 10 132 2.0 7.0 4.5 1.8 183 chr3R 12883776 intergenic not near genes chr3R 12883868 intergenic not near genes chr3R 12883959 intergenic not near genes chr3R_10_12880001 chr3R_12880001 RAL-320 2177 chr3R 12885094 12885133 chr3R 12885220 12885258 12 121 3.5 5.0 4.2 2.3 164 chr3R 12885094 intergenic not near genes chr3R 12885176 intergenic not near genes chr3R 12885258 intergenic not near genes chr3R_12_12885001 chr3R_12885001 RAL-320 2178 chr3R 12894585 12894626 chr3R 12894708 12894759 5 131 0.5 0.0 0.2 4.2 174 chr3R 12894585 intergenic not near genes chr3R 12894672 intergenic not near genes chr3R 12894759 intergenic not near genes chr3R_5_12890001 chr3R_12890001 RAL-320 2179 chr3R 12920141 12920183 chr3R 12925356 12925394 copia 7 5215 3.0 6.5 4.8 1.2 5253 chr3R 12920141 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925394 intron beat-Vb + chr3R_7_12920001 chr3R_12920001 RAL-320 2180 chr3R 12920184 12920186 chr3R 12925355 12925364 copia 8 5192 3.0 6.0 4.5 1.5 5180 chr3R 12920184 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925364 intron beat-Vb + chr3R_8_12920001 chr3R_12920001 RAL-320 2181 chr3R 12947270 12947311 chr3R 12947451 12947492 16 173 3.0 2.5 2.8 4.2 222 chr3R 12947270 intergenic not near genes chr3R 12947381 intergenic not near genes chr3R 12947492 intergenic not near genes chr3R_16_12945001 chr3R_12945001 RAL-320 2182 chr3R 12972537 12972571 chr3R 12972696 12972730 16 156 8.5 8.0 8.2 1.7 193 chr3R 12972537 intron CG7381 - chr3R 12972634 intron CG7381 - chr3R 12972730 intron CG7381 - chr3R_16_12970001 chr3R_12970001 RAL-320 2183 chr3R 13059941 13059966 chr3R 13060156 13060166 6 212 5.0 2.0 3.5 1.3 225 chr3R 13059941 intron sim + chr3R 13060054 intron sim + chr3R 13060166 intron sim + chr3R_6_13060001 chr3R_13060001 RAL-320 2184 chr3R 13067836 13067870 chr3R 13067916 13067925 9 88 5.5 5.5 5.5 1.4 89 chr3R 13067836 intron sim + chr3R 13067880 intron sim + chr3R 13067925 intron sim + chr3R_9_13065001 chr3R_13065001 RAL-320 2185 chr3R 13075352 13075385 chr3R 13075453 13075456 12 97 5.0 2.5 3.8 2.5 104 chr3R 13075352 intron sim + chr3R 13075404 intron sim + chr3R 13075456 intron sim + chr3R_12_13075001 chr3R_13075001 RAL-320 2186 chr3R 13135819 13135839 chr3R 13138004 13138024 pogo 5 2182 6.0 4.0 5.0 0.8 2205 chr3R 13135819 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136922 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138024 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 RAL-320 2187 chr3R 13138303 13138337 chr3R 13138411 13138419 9 99 3.0 8.5 5.8 1.3 116 chr3R 13138303 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138361 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138419 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_9_13135001 chr3R_13135001 RAL-320 2188 chr3R 13143055 13143065 chr3R 13148615 13148631 mdg3 8 5578 1.5 9.5 5.5 1.2 5576 chr3R 13143055 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145843 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148631 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13145001 chr3R_13145001 RAL-320 2189 chr3R 13314085 13314122 chr3R 13318892 13318930 Doc 8 4805 6.5 5.0 5.8 1.2 4845 chr3R 13314085 intergenic not near genes chr3R 13316508 intergenic not near genes chr3R 13318930 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-320 2190 chr3R 13348984 13349034 chr3R 13349080 13349130 14 90 4.0 5.0 4.5 2.5 146 chr3R 13348984 intergenic not near genes chr3R 13349057 intergenic not near genes chr3R 13349130 intergenic not near genes chr3R_14_13345001 chr3R_13345001 RAL-320 2191 chr3R 13364616 13364641 chr3R 13364720 13364745 9 103 4.0 0.0 2.0 3.0 129 chr3R 13364616 intron poly - chr3R 13364680 intron poly - chr3R 13364745 intron poly - chr3R_9_13360001 chr3R_13360001 RAL-320 2192 chr3R 13418646 13418684 chr3R 13418742 13418780 10 95 6.0 4.5 5.2 1.6 134 chr3R 13418646 intergenic not near genes chr3R 13418713 intergenic not near genes chr3R 13418780 intergenic not near genes chr3R_10_13415001 chr3R_13415001 RAL-320 2193 chr3R 13435370 13435418 chr3R 13435565 13435613 12 188 4.5 3.5 4.0 2.4 243 chr3R 13435370 intergenic yrt - chr3R 13435492 intergenic not near genes chr3R 13435613 intergenic not near genes chr3R_12_13435001 chr3R_13435001 RAL-320 2194 chr3R 13436018 13436073 chr3R 13437760 13437803 13 1737 3.0 6.0 4.5 2.4 1785 chr3R 13436018 intergenic not near genes chr3R 13436910 intergenic not near genes chr3R 13437803 intergenic not near genes chr3R_13_13435001 chr3R_13435001 RAL-320 2195 chr3R 13517209 13517253 chr3R 13520046 13520090 jockey 8 2834 4.5 0.0 2.2 2.5 2881 chr3R 13517209 intergenic not near genes chr3R 13518650 intergenic not near genes chr3R 13520090 intergenic not near genes chr3R_8_13515001 chr3R_13515001 RAL-320 2196 chr3R 13563329 13563361 chr3R 13563426 13563432 6 90 7.5 9.0 8.2 0.7 103 chr3R 13563329 intergenic not near genes chr3R 13563380 intergenic not near genes chr3R 13563432 intergenic not near genes chr3R_6_13560001 chr3R_13560001 RAL-320 2197 chr3R 13603039 13603327 chr3R 13603150 13603439 14 106 5.5 4.5 5.0 2.3 400 chr3R 13603039 intergenic not near genes chr3R 13603239 intergenic not near genes chr3R 13603439 intergenic not near genes chr3R_14_13600001 chr3R_13600001 RAL-320 2198 chr3R 13603340 13603370 chr3R 13603452 13603469 7 109 2.0 4.5 3.2 1.7 129 chr3R 13603340 intergenic not near genes chr3R 13603404 intergenic not near genes chr3R 13603469 intergenic not near genes chr3R_7_13600001 chr3R_13600001 RAL-320 2199 chr3R 13604039 13604071 chr3R 13604294 13604326 11 255 4.0 2.5 3.2 2.6 287 chr3R 13604039 intergenic not near genes chr3R 13604182 intergenic not near genes chr3R 13604326 intergenic not near genes chr3R_11_13600001 chr3R_13600001 RAL-320 2200 chr3R 13604083 13604086 chr3R 13604293 13604341 4 239 3.0 2.5 2.8 1.1 258 chr3R 13604083 intergenic not near genes chr3R 13604212 intergenic not near genes chr3R 13604341 intergenic not near genes chr3R_4_13600001 chr3R_13600001 RAL-320 2201 chr3R 13606700 13606718 chr3R 13606866 13606885 5 167 4.0 5.0 4.5 0.9 185 chr3R 13606700 intergenic CG9759 - chr3R 13606792 intergenic CG9759 - chr3R 13606885 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 RAL-320 2202 chr3R 13606719 13606735 chr3R 13606848 13606902 10 159 2.0 3.5 2.8 2.6 183 chr3R 13606719 intergenic CG9759 - chr3R 13606810 intergenic CG9759 - chr3R 13606902 intergenic CG9759 - chr3R_10_13605001 chr3R_13605001 RAL-320 2203 chr3R 13625701 13625719 chr3R 13625802 13625820 7 100 3.5 10.0 6.8 0.9 119 chr3R 13625701 intergenic not near genes chr3R 13625760 intergenic not near genes chr3R 13625820 intergenic not near genes chr3R_7_13625001 chr3R_13625001 RAL-320 2204 chr3R 13639728 13639768 chr3R 13639903 13639943 10 172 3.0 3.5 3.2 2.4 215 chr3R 13639728 intron sqd - chr3R 13639836 intron sqd - chr3R 13639943 intron sqd - chr3R_10_13635001 chr3R_13635001 RAL-320 2205 chr3R 13657095 13657128 chr3R 13657181 13657205 9 76 6.0 2.5 4.2 1.7 110 chr3R 13657095 3` UTR Hrb87F - chr3R 13657150 intron Hrb87F - chr3R 13657205 intron Hrb87F - chr3R_9_13655001 chr3R_13655001 RAL-320 2206 chr3R 13672927 13672939 chr3R 13673025 13673036 5 95 15.0 8.5 11.8 0.4 109 chr3R 13672927 intron Task6 - chr3R 13672982 intron Task6 - chr3R 13673036 intron Task6 - chr3R_5_13670001 chr3R_13670001 RAL-320 2207 chr3R 13672941 13672970 chr3R 13673024 13673068 15 95 6.5 8.5 7.5 1.8 127 chr3R 13672941 intron Task6 - chr3R 13673004 intron Task6 - chr3R 13673068 intron Task6 - chr3R_15_13670001 chr3R_13670001 RAL-320 2208 chr3R 13693028 13693028 chr3R 21907534 21907535 9 8214507 23.5 20.0 21.8 0.4 8214507 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_9_17800001 chr3R_17800001 RAL-320 2209 chr3R 13712625 13712651 chr3R 13712722 13712758 10 107 2.5 3.5 3.0 2.5 133 chr3R 13712625 3` UTR CR34044 - chr3R 13712692 3` UTR CR34044 - chr3R 13712758 3` UTR CR34044 - chr3R_10_13710001 chr3R_13710001 RAL-320 2210 chr3R 13719801 13719848 chr3R 13720132 13720160 16 331 4.0 7.5 5.8 2.4 359 chr3R 13719801 intron CG34383 + chr3R 13719980 intron CG34383 + chr3R 13720160 intron CG34383 + chr3R_16_13715001 chr3R_13715001 RAL-320 2211 chr3R 13765237 13765283 chr3R 13765339 13765387 12 99 3.0 3.5 3.2 2.9 150 chr3R 13765237 intergenic not near genes chr3R 13765312 intergenic CG9312 + chr3R 13765387 intergenic CG9312 + chr3R_12_13765001 chr3R_13765001 RAL-320 2212 chr3R 13841250 13841263 chr3R 13841341 13841353 4 89 3.5 5.5 4.5 0.7 103 chr3R 13841250 intergenic not near genes chr3R 13841302 intergenic not near genes chr3R 13841353 intergenic not near genes chr3R_4_13840001 chr3R_13840001 RAL-320 2213 chr3R 13842359 13842393 chr3R 13842474 13842498 13 109 3.0 5.0 4.0 2.6 139 chr3R 13842359 intergenic not near genes chr3R 13842428 intergenic not near genes chr3R 13842498 intergenic not near genes chr3R_13_13840001 chr3R_13840001 RAL-320 2214 chr3R 13850296 13850342 chr3R 13850410 13850450 9 106 0.0 3.5 1.8 3.2 154 chr3R 13850296 intergenic not near genes chr3R 13850373 intergenic not near genes chr3R 13850450 intergenic not near genes chr3R_9_13850001 chr3R_13850001 RAL-320 2215 chr3R 13863686 13863695 chr3R 13863774 13863802 4 96 6.0 8.0 7.0 0.5 116 chr3R 13863686 intergenic not near genes chr3R 13863744 intergenic not near genes chr3R 13863802 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-320 2216 chr3R 13863697 13863709 chr3R 13863767 13863774 4 79 3.5 7.0 5.2 0.6 77 chr3R 13863697 intergenic not near genes chr3R 13863736 intergenic not near genes chr3R 13863774 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-320 2217 chr3R 13948209 13948253 chr3R 13948307 13948351 11 96 2.5 3.0 2.8 2.9 142 chr3R 13948209 intergenic CG31517 + chr3R 13948280 intergenic CG31517 + chr3R 13948351 intergenic CG31517 + chr3R_11_13945001 chr3R_13945001 RAL-320 2218 chr3R 14021628 14021680 chr3R 14023465 14023517 S-element 18 1836 6.0 5.5 5.8 2.6 1889 chr3R 14021628 intron rdx - chr3R 14022572 intron rdx - chr3R 14023517 intron rdx - chr3R_18_14020001 chr3R_14020001 RAL-320 2219 chr3R 8760372 8760376 chr3R 14035511 14035518 4 5275140 23.5 18.5 21.0 0.2 5275146 chr3R 8760372 intron,intron CG11768 -,CG34135 - chr3R 11397945 3` UTR pros + chr3R 14035518 exon CG9922 - chr3R_4_11395001 chr3R_11395001 RAL-320 2220 chr3R 14037573 14037587 chr3R 14037674 14037687 6 99 8.0 9.0 8.5 0.6 114 chr3R 14037573 intergenic not near genes chr3R 14037630 intergenic not near genes chr3R 14037687 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-320 2221 chr3R 14047753 14047801 chr3R 14047863 14047911 9 110 0.0 3.5 1.8 3.2 158 chr3R 14047753 intergenic not near genes chr3R 14047832 intergenic not near genes chr3R 14047911 intergenic not near genes chr3R_9_14045001 chr3R_14045001 RAL-320 2222 chr3R 14048993 14049045 chr3R 14049093 14049145 23 97 4.5 5.5 5.0 3.8 152 chr3R 14048993 intergenic not near genes chr3R 14049069 intergenic not near genes chr3R 14049145 intergenic not near genes chr3R_23_14045001 chr3R_14045001 RAL-320 2223 chr3R 14058114 14058149 chr3R 14058243 14058289 11 136 3.5 7.5 5.5 1.7 175 chr3R 14058114 intron foxo + chr3R 14058202 intron foxo + chr3R 14058289 intron foxo + chr3R_11_14055001 chr3R_14055001 RAL-320 2224 chr3R 14067129 14067154 chr3R 14067228 14067253 10 99 3.5 2.5 3.0 2.5 124 chr3R 14067129 exon foxo + chr3R 14067191 intron foxo + chr3R 14067253 intron foxo + chr3R_10_14065001 chr3R_14065001 RAL-320 2225 chr3R 14077615 14077652 chr3R 14077712 14077749 16 96 3.5 5.0 4.2 3.1 134 chr3R 14077615 intron foxo + chr3R 14077682 intron foxo + chr3R 14077749 intron foxo + chr3R_16_14075001 chr3R_14075001 RAL-320 2226 chr3R 14083396 14083424 chr3R 14083513 14083523 10 118 6.5 0.0 3.2 2.4 127 chr3R 14083396 intron foxo + chr3R 14083460 intron foxo + chr3R 14083523 intron foxo + chr3R_10_14080001 chr3R_14080001 RAL-320 2227 chr3R 14109076 14109092 chr3R 14109177 14109177 8 97 3.0 0.5 1.8 2.9 101 chr3R 14109076 intergenic CR44237 -,Or88a + chr3R 14109126 intergenic CR44237 -,Or88a + chr3R 14109177 intergenic CR44237 -,Or88a + chr3R_8_14105001 chr3R_14105001 RAL-320 2228 chr3R 14109099 14109111 chr3R 14109168 14109212 7 93 2.5 0.5 1.5 2.8 113 chr3R 14109099 intergenic CR44237 -,Or88a + chr3R 14109156 intergenic CR44237 -,Or88a + chr3R 14109212 intergenic CR44237 -,Or88a + chr3R_7_14105001 chr3R_14105001 RAL-320 2229 chr3R 14117430 14117468 chr3R 14117526 14117564 19 94 5.0 5.5 5.2 3.1 134 chr3R 14117430 intron Kif19A - chr3R 14117497 intron Kif19A - chr3R 14117564 intron Kif19A - chr3R_19_14115001 chr3R_14115001 RAL-320 2230 chr3R 14164243 14164288 chr3R 14164469 14164501 12 220 1.5 2.0 1.8 4.3 258 chr3R 14164243 intergenic not near genes chr3R 14164372 intergenic not near genes chr3R 14164501 intergenic not near genes chr3R_12_14160001 chr3R_14160001 RAL-320 2231 chr3R 14180796 14180820 chr3R 14185581 14185590 F-element 7 4780 6.5 1.0 3.8 1.5 4794 chr3R 14180796 intron Dop1R1 - chr3R 14183193 intron Dop1R1 - chr3R 14185590 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 RAL-320 2232 chr3R 14180824 14180845 chr3R 14185578 14185590 F-element 12 4761 3.0 1.0 2.0 4.0 4766 chr3R 14180824 intron Dop1R1 - chr3R 14183207 intron Dop1R1 - chr3R 14185590 intron Dop1R1 - chr3R_12_14180001 chr3R_14180001 RAL-320 2233 chr3R 14248710 14248738 chr3R 14248808 14248836 10 98 2.5 6.0 4.2 1.9 126 chr3R 14248710 intergenic not near genes chr3R 14248773 intergenic not near genes chr3R 14248836 intergenic not near genes chr3R_10_14245001 chr3R_14245001 RAL-320 2234 chr3R 14253699 14253721 chr3R 14253786 14253820 6 95 3.5 4.5 4.0 1.2 121 chr3R 14253699 intron Aats-met - chr3R 14253760 intron Aats-met - chr3R 14253820 intron Aats-met - chr3R_6_14250001 chr3R_14250001 RAL-320 2235 chr3R 14327681 14327723 chr3R 14327772 14327825 17 98 3.0 2.5 2.8 4.5 144 chr3R 14327681 3` UTR CG3321 + chr3R 14327753 intergenic CG3321 +,spn-B + chr3R 14327825 intergenic CG3321 +,spn-B + chr3R_17_14325001 chr3R_14325001 RAL-320 2236 chr3R 14356597 14356613 chr3R 14356677 14356698 8 92 1.5 7.5 4.5 1.5 101 chr3R 14356597 intron NK7.1 - chr3R 14356648 intron NK7.1 - chr3R 14356698 intron NK7.1 - chr3R_8_14355001 chr3R_14355001 RAL-320 2237 chr3R 14365718 14365761 chr3R 14365826 14365869 5 108 9.5 0.0 4.8 0.9 151 chr3R 14365718 intron NK7.1 - chr3R 14365794 intron NK7.1 - chr3R 14365869 intron NK7.1 - chr3R_5_14365001 chr3R_14365001 RAL-320 2238 chr3R 14482405 14482416 chr3R 14482465 14482514 5 93 5.0 1.5 3.2 1.2 109 chr3R 14482405 intergenic not near genes chr3R 14482460 intergenic not near genes chr3R 14482514 intergenic not near genes chr3R_5_14480001 chr3R_14480001 RAL-320 2239 chr3R 14546045 14546072 chr3R 14546121 14546169 9 94 5.5 1.0 3.2 2.1 124 chr3R 14546045 intron Pde6 - chr3R 14546107 intron Pde6 - chr3R 14546169 intron Pde6 - chr3R_9_14545001 chr3R_14545001 RAL-320 2240 chr3R 14565528 14565552 chr3R 14565681 14565688 4 148 7.5 9.5 8.5 0.4 160 chr3R 14565528 intergenic CG14852 + chr3R 14565608 intergenic CG14852 + chr3R 14565688 intergenic CG14852 + chr3R_4_14565001 chr3R_14565001 RAL-320 2241 chr3R 14608450 14608475 chr3R 14608562 14608581 14 112 4.5 9.0 6.8 1.8 131 chr3R 14608450 intergenic stumps + chr3R 14608516 intergenic stumps + chr3R 14608581 intergenic not near genes chr3R_14_14605001 chr3R_14605001 RAL-320 2242 chr3R 14617007 14617054 chr3R 14617103 14617150 12 95 5.5 2.0 3.8 2.5 143 chr3R 14617007 exon CG14853 + chr3R 14617078 intron CG14853 + chr3R 14617150 intron CG14853 + chr3R_12_14615001 chr3R_14615001 RAL-320 2243 chr3R 14704368 14704394 chr3R 14704465 14704491 8 96 7.5 4.5 6.0 1.1 123 chr3R 14704368 intron kibra - chr3R 14704430 intron kibra - chr3R 14704491 intron kibra - chr3R_8_14700001 chr3R_14700001 RAL-320 2244 chr3R 14704397 14704408 chr3R 14704464 14704505 4 90 7.0 4.5 5.8 0.6 108 chr3R 14704397 intron kibra - chr3R 14704451 intron kibra - chr3R 14704505 intron kibra - chr3R_4_14700001 chr3R_14700001 RAL-320 2245 chr3R 14734259 14734312 chr3R 14734355 14734382 9 83 4.0 3.0 3.5 2.0 123 chr3R 14734259 intron eff - chr3R 14734320 intron eff - chr3R 14734382 intron eff - chr3R_9_14730001 chr3R_14730001 RAL-320 2246 chr3R 14764549 14764589 chr3R 14764667 14764697 11 108 3.0 3.0 3.0 2.8 148 chr3R 14764549 intron jvl + chr3R 14764623 intron jvl + chr3R 14764697 intron jvl + chr3R_11_14760001 chr3R_14760001 RAL-320 2247 chr3R 14795639 14795692 chr3R 14795744 14795787 16 100 4.5 3.0 3.8 3.3 148 chr3R 14795639 3` UTR jvl + chr3R 14795713 3` UTR jvl + chr3R 14795787 3` UTR jvl + chr3R_16_14795001 chr3R_14795001 RAL-320 2248 chr3R 14966031 14966073 chr3R 14966334 14966346 8 297 7.5 3.5 5.5 1.2 315 chr3R 14966031 intergenic not near genes chr3R 14966188 intergenic not near genes chr3R 14966346 intergenic not near genes chr3R_8_14965001 chr3R_14965001 RAL-320 2249 chr3R 15041399 15041419 chr3R 15045188 15045223 Doc 5 3801 0.0 2.0 1.0 2.5 3824 chr3R 15041399 intergenic not near genes chr3R 15043311 intergenic not near genes chr3R 15045223 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-320 2250 chr3R 15059267 15059480 chr3R 15059480 15059587 BS 16 192 0.0 0.0 0.0 16.0 320 chr3R 15059267 intron dpr9 - chr3R 15059427 intron dpr9 - chr3R 15059587 intron dpr9 - chr3R_16_15055001 chr3R_15055001 RAL-320 2251 chr3R 15079791 15079836 chr3R 15080052 15080077 pogo 12 258 5.0 1.0 3.0 3.0 286 chr3R 15079791 3` UTR CG6966 - chr3R 15079934 3` UTR CG6966 - chr3R 15080077 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-320 2252 chr3R 15102475 15102528 chr3R 15109752 15109803 412 14 7276 3.0 4.0 3.5 3.1 7328 chr3R 15102475 intron CG42788 - chr3R 15106139 intron CG42788 - chr3R 15109803 intron CG42788 - chr3R_14_15105001 chr3R_15105001 RAL-320 2253 chr3R 15132052 15132081 chr3R 15135122 15135161 Juan 7 3076 4.5 6.0 5.2 1.1 3109 chr3R 15132052 intergenic CG42788 - chr3R 15133606 intergenic not near genes chr3R 15135161 3` UTR CG6912 - chr3R_7_15130001 chr3R_15130001 RAL-320 2254 chr3R 15406125 15406150 chr3R 15406226 15406251 7 98 8.0 0.0 4.0 1.4 126 chr3R 15406125 intron CG6125 - chr3R 15406188 intron CG6125 - chr3R 15406251 intron CG6125 - chr3R_7_15405001 chr3R_15405001 RAL-320 2255 chr3R 15406152 15406171 chr3R 15406214 15406272 5 88 5.0 0.0 2.5 1.4 120 chr3R 15406152 intron CG6125 - chr3R 15406212 intron CG6125 - chr3R 15406272 intron CG6125 - chr3R_5_15405001 chr3R_15405001 RAL-320 2256 chr3R 15416252 15416285 chr3R 15416326 15416345 8 87 5.0 6.5 5.8 1.2 93 chr3R 15416252 3` UTR Atx2 + chr3R 15416298 3` UTR Atx2 + chr3R 15416345 3` UTR Atx2 + chr3R_8_15415001 chr3R_15415001 RAL-320 2257 chr3R 15450549 15450579 chr3R 15450633 15450651 6 82 9.0 1.5 5.2 1.0 102 chr3R 15450549 intron AdamTS-A - chr3R 15450600 intron AdamTS-A - chr3R 15450651 intron AdamTS-A - chr3R_6_15450001 chr3R_15450001 RAL-320 2258 chr3R 15473606 15473627 chr3R 15473702 15473708 5 88 9.0 9.5 9.2 0.5 102 chr3R 15473606 intron AdamTS-A - chr3R 15473657 intron AdamTS-A - chr3R 15473708 intron AdamTS-A - chr3R_5_15470001 chr3R_15470001 RAL-320 2259 chr3R 15517608 15517633 chr3R 15517681 15517690 5 67 4.5 1.5 3.0 1.2 82 chr3R 15517608 intergenic not near genes chr3R 15517649 intergenic not near genes chr3R 15517690 intergenic not near genes chr3R_5_15515001 chr3R_15515001 RAL-320 2260 chr3R 15521939 15521991 chr3R 15522050 15522072 11 101 1.0 5.0 3.0 2.8 133 chr3R 15521939 intergenic not near genes chr3R 15522006 intergenic not near genes chr3R 15522072 intergenic not near genes chr3R_11_15520001 chr3R_15520001 RAL-320 2261 chr3R 15594661 15594673 chr3R 15594751 15594776 7 98 0.5 12.0 6.2 1.0 115 chr3R 15594661 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594776 intergenic not near genes chr3R_7_15590001 chr3R_15590001 RAL-320 2262 chr3R 15601151 15601191 chr3R 15608693 15608733 412 14 7542 4.5 7.5 6.0 2.0 7582 chr3R 15601151 intergenic not near genes chr3R 15604942 intergenic not near genes chr3R 15608733 intergenic not near genes chr3R_14_15600001 chr3R_15600001 RAL-320 2263 chr3R 15610554 15610590 chr3R 15610650 15610686 4 96 0.5 8.0 4.2 0.8 132 chr3R 15610554 intergenic not near genes chr3R 15610620 intergenic not near genes chr3R 15610686 intergenic not near genes chr3R_4_15610001 chr3R_15610001 RAL-320 2264 chr3R 15618726 15618761 chr3R 15626208 15626255 blood 12 7490 4.0 7.0 5.5 1.8 7529 chr3R 15618726 intergenic not near genes chr3R 15622490 intergenic not near genes chr3R 15626255 intergenic not near genes chr3R_12_15620001 chr3R_15620001 RAL-320 2265 chr3R 15635203 15635240 chr3R 15635309 15635361 7 119 4.0 2.0 3.0 1.8 158 chr3R 15635203 intergenic CG43335 + chr3R 15635282 intergenic CG43335 + chr3R 15635361 intergenic CG43335 + chr3R_7_15635001 chr3R_15635001 RAL-320 2266 chr3R 15718370 15718413 chr3R 15718473 15718512 13 102 2.5 3.0 2.8 3.4 142 chr3R 15718370 intergenic not near genes chr3R 15718441 intergenic not near genes chr3R 15718512 intergenic not near genes chr3R_13_15715001 chr3R_15715001 RAL-320 2267 chr3R 15735224 15735235 chr3R 15739964 15739975 F-element 4 4740 3.5 5.0 4.2 0.8 4751 chr3R 15735224 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739975 intergenic not near genes chr3R_4_15735001 chr3R_15735001 RAL-320 2268 chr3R 15790116 15790261 chr3R 15790240 15790399 24 121 18.5 18.0 18.2 1.2 283 chr3R 15790116 exon c(3)G - chr3R 15790258 exon c(3)G - chr3R 15790399 exon c(3)G - chr3R_24_15790001 chr3R_15790001 RAL-320 2269 chr3R 15790286 15790403 chr3R 15790577 15790629 18 236 27.0 33.5 30.2 0.6 343 chr3R 15790286 exon c(3)G - chr3R 15790458 exon c(3)G - chr3R 15790629 exon c(3)G - chr3R_18_15790001 chr3R_15790001 RAL-320 2270 chr3R 15790821 15790856 chr3R 15790957 15790962 14 133 26.0 26.0 26.0 0.5 141 chr3R 15790821 exon c(3)G - chr3R 15790892 exon c(3)G - chr3R 15790962 exon c(3)G - chr3R_14_15790001 chr3R_15790001 RAL-320 2271 chr3R 15878083 15878102 chr3R 15878191 15878210 8 108 4.0 6.5 5.2 1.3 127 chr3R 15878083 intergenic not near genes chr3R 15878146 intergenic not near genes chr3R 15878210 intergenic not near genes chr3R_8_15875001 chr3R_15875001 RAL-320 2272 chr3R 15891655 15891686 chr3R 15892056 15892079 8 397 2.5 2.0 2.2 2.5 424 chr3R 15891655 intron CG14877 - chr3R 15891867 intron CG14877 - chr3R 15892079 intron CG14877 - chr3R_8_15890001 chr3R_15890001 RAL-320 2273 chr3R 16033407 16033430 chr3R 16033508 16033531 6 100 2.5 5.5 4.0 1.2 124 chr3R 16033407 intron pnr + chr3R 16033469 intron pnr + chr3R 16033531 intron pnr + chr3R_6_16030001 chr3R_16030001 RAL-320 2274 chr3R 16048850 16048882 chr3R 16048942 16048972 12 93 4.0 3.5 3.8 2.5 122 chr3R 16048850 intron ird5 - chr3R 16048911 intron ird5 - chr3R 16048972 intron ird5 - chr3R_12_16045001 chr3R_16045001 RAL-320 2275 chr3R 16179058 16179089 chr3R 16179201 16179210 8 138 9.0 3.0 6.0 1.1 152 chr3R 16179058 intron CG8925 + chr3R 16179134 intron CG8925 + chr3R 16179210 intron CG8925 + chr3R_8_16175001 chr3R_16175001 RAL-320 2276 chr3R 16179094 16179108 chr3R 16179200 16179221 4 126 4.5 3.0 3.8 0.8 127 chr3R 16179094 intron CG8925 + chr3R 16179158 intron CG8925 + chr3R 16179221 intron CG8925 + chr3R_4_16175001 chr3R_16175001 RAL-320 2277 chr3R 16225071 16225083 chr3R 16225176 16225183 4 104 12.5 2.5 7.5 0.5 112 chr3R 16225071 intergenic not near genes chr3R 16225127 intergenic not near genes chr3R 16225183 intergenic tara + chr3R_4_16225001 chr3R_16225001 RAL-320 2278 chr3R 16225085 16225119 chr3R 16225173 16225224 12 97 3.0 2.0 2.5 3.4 139 chr3R 16225085 intergenic not near genes chr3R 16225154 intergenic tara + chr3R 16225224 intergenic tara + chr3R_12_16225001 chr3R_16225001 RAL-320 2279 chr3R 16472572 16472613 chr3R 16472657 16472674 5 74 7.0 10.5 8.8 0.5 102 chr3R 16472572 intergenic Gyc-89Da + chr3R 16472623 5` UTR Gyc-89Da + chr3R 16472674 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 RAL-320 2280 chr3R 16490660 16490699 chr3R 16490753 16490799 9 90 7.5 5.5 6.5 1.2 139 chr3R 16490660 exon Cad89D - chr3R 16490730 exon Cad89D - chr3R 16490799 intron Cad89D - chr3R_9_16490001 chr3R_16490001 RAL-320 2281 chr3R 16538226 16538272 chr3R 16538793 16538840 11 562 4.5 8.0 6.2 1.5 614 chr3R 16538226 intron CG42342 + chr3R 16538533 intron CG42342 + chr3R 16538840 intron CG42342 + chr3R_11_16535001 chr3R_16535001 RAL-320 2282 chr3R 16671236 16671261 chr3R 16671330 16671360 9 91 4.0 5.5 4.8 1.6 124 chr3R 16671236 intron Ubx - chr3R 16671298 intron Ubx - chr3R 16671360 intron Ubx - chr3R_9_16670001 chr3R_16670001 RAL-320 2283 chr3R 16695226 16695261 chr3R 16695344 16695379 11 118 6.0 4.0 5.0 1.8 153 chr3R 16695226 intron Ubx - chr3R 16695302 intron Ubx - chr3R 16695379 intron Ubx - chr3R_11_16695001 chr3R_16695001 RAL-320 2284 chr3R 16731910 16731943 chr3R 16732011 16732043 4 100 5.0 3.0 4.0 0.8 133 chr3R 16731910 intron Ubx - chr3R 16731976 intron Ubx - chr3R 16732043 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-320 2285 chr3R 16756317 16756354 chr3R 16762519 16762538 diver 10 6202 1.0 1.5 1.2 4.5 6221 chr3R 16756317 intron bxd - chr3R 16759428 intron bxd - chr3R 16762538 intron bxd - chr3R_10_16755001 chr3R_16755001 RAL-320 2286 chr3R 16771610 16771620 chr3R 16771706 16771716 4 94 4.0 3.0 3.5 0.9 106 chr3R 16771610 intron bxd - chr3R 16771663 intron bxd - chr3R 16771716 intron bxd - chr3R_4_16770001 chr3R_16770001 RAL-320 2287 chr3R 16771623 16771638 chr3R 16771697 16771713 6 85 3.0 3.0 3.0 1.5 90 chr3R 16771623 intron bxd - chr3R 16771668 intron bxd - chr3R 16771713 intron bxd - chr3R_6_16770001 chr3R_16770001 RAL-320 2288 chr3R 16860317 16860365 chr3R 16860415 16860463 15 97 2.5 0.0 1.2 6.8 146 chr3R 16860317 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860463 intron iab-8 - chr3R_15_16860001 chr3R_16860001 RAL-320 2289 chr3R 17065564 17065587 chr3R 17065847 17065881 9 289 4.0 5.5 4.8 1.6 317 chr3R 17065564 intron Dad + chr3R 17065722 intron Dad + chr3R 17065881 intron Dad + chr3R_9_17065001 chr3R_17065001 RAL-320 2290 chr3R 17065592 17065595 chr3R 17065840 17065881 5 270 3.0 5.0 4.0 1.0 289 chr3R 17065592 intron Dad + chr3R 17065736 intron Dad + chr3R 17065881 intron Dad + chr3R_5_17065001 chr3R_17065001 RAL-320 2291 chr3R 17129155 17129165 chr3R 17129257 17129267 5 101 5.5 1.0 3.2 1.2 112 chr3R 17129155 intergenic CG31265 +,CG17475 - chr3R 17129211 intergenic CG31265 +,CG17475 - chr3R 17129267 intergenic CG17475 -,CG31265 + chr3R_5_17125001 chr3R_17125001 RAL-320 2292 chr3R 17129171 17129176 chr3R 17129256 17129278 4 98 4.0 1.0 2.5 1.1 107 chr3R 17129171 intergenic CG31265 +,CG17475 - chr3R 17129224 intergenic CG31265 +,CG17475 - chr3R 17129278 intergenic CG17475 -,CG31265 + chr3R_4_17125001 chr3R_17125001 RAL-320 2293 chr3R 17184716 17184756 chr3R 17184812 17184852 15 94 3.5 4.5 4.0 3.0 136 chr3R 17184716 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184852 intron Mur89F - chr3R_15_17180001 chr3R_17180001 RAL-320 2294 chr3R 17209685 17209706 chr3R 17209793 17209814 4 107 8.5 8.0 8.2 0.4 129 chr3R 17209685 intergenic not near genes chr3R 17209750 intergenic not near genes chr3R 17209814 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-320 2295 chr3R 17268653 17268698 chr3R 17268795 17268840 24 140 3.0 4.5 3.8 5.0 187 chr3R 17268653 intergenic not near genes chr3R 17268746 intergenic not near genes chr3R 17268840 intergenic not near genes chr3R_24_17265001 chr3R_17265001 RAL-320 2296 chr3R 17273956 17274000 chr3R 17274077 17274127 18 123 3.5 5.5 4.5 3.3 171 chr3R 17273956 intergenic not near genes chr3R 17274042 intergenic not near genes chr3R 17274127 intergenic not near genes chr3R_18_17270001 chr3R_17270001 RAL-320 2297 chr3R 17294656 17294702 chr3R 17295096 17295150 BS 23 447 3.0 6.5 4.8 4.0 494 chr3R 17294656 intergenic not near genes chr3R 17294903 intergenic not near genes chr3R 17295150 intergenic not near genes chr3R_23_17290001 chr3R_17290001 RAL-320 2298 chr3R 17346675 17346715 chr3R 17348258 17348298 F-element 11 1581 5.0 10.5 7.8 1.2 1623 chr3R 17346675 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348298 intron beat-IIa - chr3R_11_17345001 chr3R_17345001 RAL-320 2299 chr3R 17383187 17383238 chr3R 17383292 17383343 16 103 4.0 3.5 3.8 3.3 156 chr3R 17383187 intron,intron Brf -,lute + chr3R 17383265 intron,intron Brf -,lute + chr3R 17383343 intron,intron Brf -,lute + chr3R_16_17380001 chr3R_17380001 RAL-320 2300 chr3R 17452527 17452578 chr3R 17452747 17452798 14 215 5.5 4.0 4.8 2.4 271 chr3R 17452527 intergenic not near genes chr3R 17452662 intergenic not near genes chr3R 17452798 intergenic not near genes chr3R_14_17450001 chr3R_17450001 RAL-320 2301 chr3R 17467591 17467621 chr3R 17467722 17467752 15 128 1.0 3.0 2.0 5.0 161 chr3R 17467591 intergenic not near genes chr3R 17467672 intergenic not near genes chr3R 17467752 intergenic not near genes chr3R_15_17465001 chr3R_17465001 RAL-320 2302 chr3R 17497944 17497993 chr3R 17498047 17498099 20 104 3.5 4.0 3.8 4.2 155 chr3R 17497944 intron Dscam3 - chr3R 17498022 intron Dscam3 - chr3R 17498099 intron Dscam3 - chr3R_20_17495001 chr3R_17495001 RAL-320 2303 chr3R 17507442 17507476 chr3R 17507540 17507574 13 98 3.0 7.0 5.0 2.2 132 chr3R 17507442 intergenic not near genes chr3R 17507508 intergenic not near genes chr3R 17507574 intergenic not near genes chr3R_13_17505001 chr3R_17505001 RAL-320 2304 chr3R 17522290 17522301 chr3R 17522410 17522421 6 119 0.0 3.5 1.8 2.1 131 chr3R 17522290 intergenic not near genes chr3R 17522356 intergenic not near genes chr3R 17522421 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-320 2305 chr3R 17586706 17586747 chr3R 17586830 17586872 13 123 1.5 5.5 3.5 2.9 166 chr3R 17586706 intergenic not near genes chr3R 17586789 intergenic not near genes chr3R 17586872 intergenic not near genes chr3R_13_17585001 chr3R_17585001 RAL-320 2306 chr3R 17591297 17591318 chr3R 17591718 17591756 F-element 5 436 7.5 3.0 5.2 0.8 459 chr3R 17591297 intergenic not near genes chr3R 17591526 intergenic not near genes chr3R 17591756 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-320 2307 chr3R 17638304 17638350 chr3R 17638806 17638821 roo 16 501 9.5 6.5 8.0 1.8 517 chr3R 17638304 intron CG43175 + chr3R 17638562 intron CG43175 + chr3R 17638821 intron,intron CG43175 +,CR45222 + chr3R_16_17635001 chr3R_17635001 RAL-320 2308 chr3R 17734823 17734855 chr3R 17734956 17734985 12 132 3.5 3.0 3.2 2.9 162 chr3R 17734823 intergenic CG14321 + chr3R 17734904 intergenic not near genes chr3R 17734985 intergenic not near genes chr3R_12_17730001 chr3R_17730001 RAL-320 2309 chr3R 17766560 17766587 chr3R 17766684 17766711 8 123 0.0 10.0 5.0 1.3 151 chr3R 17766560 intergenic not near genes chr3R 17766636 intergenic not near genes chr3R 17766711 intergenic not near genes chr3R_8_17765001 chr3R_17765001 RAL-320 2310 chr3R 17773362 17773376 chr3R 17773472 17773491 8 113 8.0 5.0 6.5 1.1 129 chr3R 17773362 intron CG43102 - chr3R 17773426 intron CG43102 - chr3R 17773491 exon CG43102 - chr3R_8_17770001 chr3R_17770001 RAL-320 2311 chr3R 17811178 17811217 chr3R 17811278 17811285 7 94 5.5 0.0 2.8 1.8 107 chr3R 17811178 intergenic CG18012 -,tinc + chr3R 17811232 intergenic CG18012 -,tinc + chr3R 17811285 intergenic CG18012 -,tinc + chr3R_7_17810001 chr3R_17810001 RAL-320 2312 chr3R 17820271 17820313 chr3R 17820370 17820410 12 99 4.5 0.0 2.2 3.8 139 chr3R 17820271 intron tinc + chr3R 17820340 intron tinc + chr3R 17820410 intron tinc + chr3R_12_17820001 chr3R_17820001 RAL-320 2313 chr3R 17823179 17823232 chr3R 17823276 17823315 19 95 5.5 3.5 4.5 3.5 136 chr3R 17823179 intron tinc + chr3R 17823247 intron tinc + chr3R 17823315 intron tinc + chr3R_19_17820001 chr3R_17820001 RAL-320 2314 chr3R 17895322 17895376 chr3R 17895431 17895487 9 110 3.5 2.0 2.8 2.4 165 chr3R 17895322 intron Rim - chr3R 17895404 intron Rim - chr3R 17895487 intron Rim - chr3R_9_17895001 chr3R_17895001 RAL-320 2315 chr3R 17913104 17913148 chr3R 17913219 17913250 6 109 0.0 2.5 1.2 2.7 146 chr3R 17913104 intron Rim - chr3R 17913177 intron Rim - chr3R 17913250 intron Rim - chr3R_6_17910001 chr3R_17910001 RAL-320 2316 chr3R 17925858 17925889 chr3R 17927325 17927356 hobo 9 1475 4.5 10.5 7.5 1.1 1498 chr3R 17925858 intron cpo + chr3R 17926607 intron cpo + chr3R 17927356 intron cpo + chr3R_9_17925001 chr3R_17925001 RAL-320 2317 chr3R 17976503 17976533 chr3R 17976600 17976630 11 96 3.0 4.0 3.5 2.4 127 chr3R 17976503 intron cpo + chr3R 17976566 intron cpo + chr3R 17976630 intron cpo + chr3R_11_17975001 chr3R_17975001 RAL-320 2318 chr3R 18032760 18032785 chr3R 18040453 18040466 opus 11 7692 4.0 3.0 3.5 2.4 7706 chr3R 18032760 intergenic not near genes chr3R 18036613 intergenic not near genes chr3R 18040466 intergenic not near genes chr3R_11_18035001 chr3R_18035001 RAL-320 2319 chr3R 18041744 18041754 chr3R 18041841 18041851 4 97 0.0 1.5 0.8 2.2 107 chr3R 18041744 intergenic not near genes chr3R 18041798 intergenic not near genes chr3R 18041851 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-320 2320 chr3R 18041756 18041763 chr3R 18041830 18041860 5 91 0.0 0.5 0.2 4.2 104 chr3R 18041756 intergenic not near genes chr3R 18041808 intergenic not near genes chr3R 18041860 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-320 2321 chr3R 18061428 18061450 chr3R 18061540 18061562 5 112 0.5 0.0 0.2 4.2 134 chr3R 18061428 intergenic not near genes chr3R 18061495 intergenic not near genes chr3R 18061562 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-320 2322 chr3R 18061557 18061614 chr3R 18063151 18063202 F-element 4 1586 0.0 0.0 0.0 4.0 1645 chr3R 18061557 intergenic not near genes chr3R 18062380 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-320 2323 chr3R 18075664 18075717 chr3R 18075830 18075883 21 164 0.0 4.5 2.2 6.6 219 chr3R 18075664 intergenic not near genes chr3R 18075774 intergenic not near genes chr3R 18075883 intergenic not near genes chr3R_21_18075001 chr3R_18075001 RAL-320 2324 chr3R 18107125 18107141 chr3R 18107210 18107213 11 97 1.0 3.5 2.2 3.4 88 chr3R 18107125 intron sr + chr3R 18107169 intron sr + chr3R 18107213 intron sr + chr3R_11_18105001 chr3R_18105001 RAL-320 2325 chr3R 18122874 18122881 chr3R 18122971 18122978 5 97 7.5 4.0 5.8 0.7 104 chr3R 18122874 intron sr + chr3R 18122926 intron sr + chr3R 18122978 intron sr + chr3R_5_18120001 chr3R_18120001 RAL-320 2326 chr3R 18122882 18122913 chr3R 18122969 18123010 6 93 4.5 4.0 4.2 1.2 128 chr3R 18122882 intron sr + chr3R 18122946 intron sr + chr3R 18123010 intron sr + chr3R_6_18120001 chr3R_18120001 RAL-320 2327 chr3R 18136214 18136251 chr3R 18136348 18136385 8 132 5.0 4.5 4.8 1.4 171 chr3R 18136214 intergenic not near genes chr3R 18136300 intergenic not near genes chr3R 18136385 intergenic not near genes chr3R_8_18135001 chr3R_18135001 RAL-320 2328 chr3R 18163658 18163698 chr3R 18163966 18163971 7 302 6.0 1.5 3.8 1.5 313 chr3R 18163658 exon CG7218 - chr3R 18163814 intron CG7218 - chr3R 18163971 intron CG7218 - chr3R_7_18160001 chr3R_18160001 RAL-320 2329 chr3R 18215746 18215769 chr3R 18215935 18215958 5 188 2.0 4.5 3.2 1.2 212 chr3R 18215746 intergenic CG14314 + chr3R 18215852 intergenic CG14314 + chr3R 18215958 intergenic CG14314 + chr3R_5_18215001 chr3R_18215001 RAL-320 2330 chr3R 18322861 18322876 chr3R 18322940 18322994 13 104 0.0 2.5 1.2 5.9 133 chr3R 18322861 intron CG31235 - chr3R 18322928 intron CG31235 - chr3R 18322994 intron CG31235 - chr3R_13_18320001 chr3R_18320001 RAL-320 2331 chr3R 18473231 18473253 chr3R 18473338 18473360 7 106 0.0 6.0 3.0 1.8 129 chr3R 18473231 intron fru - chr3R 18473296 intron fru - chr3R 18473360 intron fru - chr3R_7_18470001 chr3R_18470001 RAL-320 2332 chr3R 18500720 18500737 chr3R 18500858 18500878 5 138 2.0 8.0 5.0 0.8 158 chr3R 18500720 intron fru - chr3R 18500799 intron fru - chr3R 18500878 intron fru - chr3R_5_18500001 chr3R_18500001 RAL-320 2333 chr3R 18501573 18501627 chr3R 18501674 18501712 27 98 5.5 5.0 5.2 4.4 139 chr3R 18501573 intron fru - chr3R 18501642 intron fru - chr3R 18501712 intron fru - chr3R_27_18500001 chr3R_18500001 RAL-320 2334 chr3R 18562552 18562568 chr3R 18562691 18562707 10 138 3.0 2.5 2.8 2.6 155 chr3R 18562552 intergenic not near genes chr3R 18562630 intergenic not near genes chr3R 18562707 intergenic not near genes chr3R_10_18560001 chr3R_18560001 RAL-320 2335 chr3R 18579555 18579572 chr3R 18579652 18579662 5 95 9.5 0.0 4.8 0.9 107 chr3R 18579555 intron,intron CG7694 +,fray + chr3R 18579608 intron,intron CG7694 +,fray + chr3R 18579662 intron,intron CG7694 +,fray + chr3R_5_18575001 chr3R_18575001 RAL-320 2336 chr3R 18603930 18603966 chr3R 18604027 18604063 13 97 6.0 6.5 6.2 1.8 133 chr3R 18603930 intron,intron qin +,CG14304 - chr3R 18603996 intron,intron qin +,CG14304 - chr3R 18604063 intron,intron qin +,CG14304 - chr3R_13_18600001 chr3R_18600001 RAL-320 2337 chr3R 18606481 18606525 chr3R 18610734 18610762 F-element 14 4249 5.5 6.0 5.8 2.1 4281 chr3R 18606481 intron,intron qin +,CG14304 - chr3R 18608622 intron,intron qin +,CG14304 - chr3R 18610762 intron,intron qin +,CG14304 - chr3R_14_18605001 chr3R_18605001 RAL-320 2338 chr3R 18618246 18618290 chr3R 18618353 18618395 7 105 0.0 5.0 2.5 2.0 149 chr3R 18618246 intron,intron qin +,CG14304 - chr3R 18618320 intron,intron qin +,CG14304 - chr3R 18618395 intron,intron qin +,CG14304 - chr3R_7_18615001 chr3R_18615001 RAL-320 2339 chr3R 18730005 18730035 chr3R 18730101 18730124 4 90 3.5 1.0 2.2 1.2 119 chr3R 18730005 exon Cha + chr3R 18730064 intron Cha + chr3R 18730124 exon Cha + chr3R_4_18730001 chr3R_18730001 RAL-320 2340 chr3R 18766763 18766809 chr3R 18766855 18766862 18 89 3.5 3.5 3.5 4.0 99 chr3R 18766763 intron CG7720 - chr3R 18766812 intron CG7720 - chr3R 18766862 intron CG7720 - chr3R_18_18765001 chr3R_18765001 RAL-320 2341 chr3R 18792790 18792835 chr3R 18792886 18792938 7 99 5.0 2.5 3.8 1.5 148 chr3R 18792790 intron CG7720 - chr3R 18792864 intron CG7720 - chr3R 18792938 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-320 2342 chr3R 18802110 18802154 chr3R 18802215 18802259 20 104 6.5 5.5 6.0 2.9 149 chr3R 18802110 3` UTR CG18208 - chr3R 18802184 3` UTR CG18208 - chr3R 18802259 3` UTR CG18208 - chr3R_20_18800001 chr3R_18800001 RAL-320 2343 chr3R 18807309 18807334 chr3R 18807405 18807430 9 94 1.5 0.0 0.8 5.0 121 chr3R 18807309 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807430 intron CG18208 - chr3R_9_18805001 chr3R_18805001 RAL-320 2344 chr3R 18812071 18812090 chr3R 18812159 18812188 10 97 7.5 4.0 5.8 1.5 117 chr3R 18812071 intron CG18208 - chr3R 18812130 intron CG18208 - chr3R 18812188 intron CG18208 - chr3R_10_18810001 chr3R_18810001 RAL-320 2345 chr3R 18812091 18812107 chr3R 18812155 18812205 9 88 4.5 3.5 4.0 1.8 114 chr3R 18812091 intron CG18208 - chr3R 18812148 intron CG18208 - chr3R 18812205 intron CG18208 - chr3R_9_18810001 chr3R_18810001 RAL-320 2346 chr3R 18855692 18855729 chr3R 18855804 18855836 9 108 0.5 5.5 3.0 2.2 144 chr3R 18855692 intergenic not near genes chr3R 18855764 intergenic not near genes chr3R 18855836 intergenic not near genes chr3R_9_18855001 chr3R_18855001 RAL-320 2347 chr3R 18897606 18897800 chr3R 18897699 18897876 8 95 4.0 6.0 5.0 1.3 270 chr3R 18897606 intergenic not near genes chr3R 18897741 intergenic CG14297 + chr3R 18897876 intergenic CG14297 + chr3R_8_18895001 chr3R_18895001 RAL-320 2348 chr3R 18927268 18927289 chr3R 18927375 18927403 7 113 4.5 5.0 4.8 1.2 135 chr3R 18927268 3` UTR Mpc1 - chr3R 18927336 3` UTR Mpc1 - chr3R 18927403 3` UTR Mpc1 - chr3R_7_18925001 chr3R_18925001 RAL-320 2349 chr3R 19002643 19002689 chr3R 19002743 19002770 7 92 2.5 2.0 2.2 2.2 127 chr3R 19002643 intron gukh + chr3R 19002706 intron gukh + chr3R 19002770 intron gukh + chr3R_7_19000001 chr3R_19000001 RAL-320 2350 chr3R 19012998 19013051 chr3R 19013102 19013155 26 103 3.5 5.5 4.5 4.7 157 chr3R 19012998 intron gukh + chr3R 19013076 intron gukh + chr3R 19013155 intron gukh + chr3R_26_19010001 chr3R_19010001 RAL-320 2351 chr3R 19060024 19060050 chr3R 19060269 19060286 5 243 3.5 13.0 8.2 0.5 262 chr3R 19060024 intron cdi - chr3R 19060155 intron cdi - chr3R 19060286 intron cdi - chr3R_5_19060001 chr3R_19060001 RAL-320 2352 chr3R 19113139 19113167 chr3R 19113251 19113285 8 116 2.5 5.0 3.8 1.7 146 chr3R 19113139 intron CG6040 + chr3R 19113212 intron CG6040 + chr3R 19113285 intron CG6040 + chr3R_8_19110001 chr3R_19110001 RAL-320 2353 chr3R 19140246 19140277 chr3R 19140714 19140735 7 465 5.5 3.5 4.5 1.3 489 chr3R 19140246 3` UTR Ppcs - chr3R 19140490 3` UTR Ppcs - chr3R 19140735 3` UTR Ppcs - chr3R_7_19140001 chr3R_19140001 RAL-320 2354 chr3R 19140281 19140291 chr3R 19140713 19140745 7 450 4.0 3.5 3.8 1.5 464 chr3R 19140281 3` UTR Ppcs - chr3R 19140513 3` UTR Ppcs - chr3R 19140745 3` UTR Ppcs - chr3R_7_19140001 chr3R_19140001 RAL-320 2355 chr3R 19193002 19193010 chr3R 19197286 19197319 F-element 7 4294 1.5 4.0 2.8 1.8 4317 chr3R 19193002 intron CG31475 + chr3R 19195160 intron CG31475 + chr3R 19197319 intron CG31475 + chr3R_7_19195001 chr3R_19195001 RAL-320 2356 chr3R 19276915 19276947 chr3R 19277012 19277045 5 99 6.5 0.5 3.5 1.1 130 chr3R 19276915 intergenic not near genes chr3R 19276980 intergenic not near genes chr3R 19277045 intergenic not near genes chr3R_5_19275001 chr3R_19275001 RAL-320 2357 chr3R 19280852 19280896 chr3R 19280945 19280959 9 87 5.5 2.0 3.8 1.9 107 chr3R 19280852 intergenic not near genes chr3R 19280906 intergenic not near genes chr3R 19280959 intergenic not near genes chr3R_9_19280001 chr3R_19280001 RAL-320 2358 chr3R 19290620 19290638 chr3R 19290705 19290748 5 101 3.5 4.5 4.0 1.0 128 chr3R 19290620 intergenic not near genes chr3R 19290684 intergenic not near genes chr3R 19290748 intergenic not near genes chr3R_5_19290001 chr3R_19290001 RAL-320 2359 chr3R 19340375 19340429 chr3R 19340472 19340524 14 93 4.5 2.5 3.5 3.1 149 chr3R 19340375 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340524 intergenic not near genes chr3R_14_19340001 chr3R_19340001 RAL-320 2360 chr3R 19369490 19369517 chr3R 19369597 19369619 10 106 3.0 3.5 3.2 2.4 129 chr3R 19369490 intron Ino80 - chr3R 19369554 intron Ino80 - chr3R 19369619 intron Ino80 - chr3R_10_19365001 chr3R_19365001 RAL-320 2361 chr3R 19418449 19418497 chr3R 19418552 19418611 5 110 4.5 0.0 2.2 1.6 162 chr3R 19418449 intron CG31221 + chr3R 19418530 intron CG31221 + chr3R 19418611 intron CG31221 + chr3R_5_19415001 chr3R_19415001 RAL-320 2362 chr3R 19426060 19426078 chr3R 19426255 19426276 8 195 10.5 5.5 8.0 0.9 216 chr3R 19426060 intron CG31221 + chr3R 19426168 intron CG31221 + chr3R 19426276 intron CG31221 + chr3R_8_19425001 chr3R_19425001 RAL-320 2363 chr3R 19426080 19426106 chr3R 19426253 19426288 10 186 4.5 5.5 5.0 1.7 208 chr3R 19426080 intron CG31221 + chr3R 19426184 intron CG31221 + chr3R 19426288 intron CG31221 + chr3R_10_19425001 chr3R_19425001 RAL-320 2364 chr3R 19494392 19494411 chr3R 19494492 19494511 7 100 6.0 3.5 4.8 1.2 119 chr3R 19494392 intron Dys + chr3R 19494452 intron Dys + chr3R 19494511 intron Dys + chr3R_7_19490001 chr3R_19490001 RAL-320 2365 chr3R 19495994 19496008 chr3R 19496100 19496114 4 106 4.0 4.0 4.0 0.8 120 chr3R 19495994 intron Dys + chr3R 19496054 intron Dys + chr3R 19496114 intron Dys + chr3R_4_19495001 chr3R_19495001 RAL-320 2366 chr3R 19602550 19602780 chr3R 19602650 19602878 37 97 28.0 31.5 29.8 1.2 328 chr3R 19602550 exon CG7333 + chr3R 19602714 intergenic CG7333 + chr3R 19602878 intergenic CG7333 +,CG7342 + chr3R_37_19600001 chr3R_19600001 RAL-320 2367 chr3R 19717190 19717237 chr3R 19717377 19717393 12 170 4.5 5.5 5.0 2.0 203 chr3R 19717190 intergenic not near genes chr3R 19717292 intergenic not near genes chr3R 19717393 intergenic not near genes chr3R_12_19715001 chr3R_19715001 RAL-320 2368 chr3R 19783163 19783207 chr3R 19783271 19783315 14 108 5.5 4.0 4.8 2.4 152 chr3R 19783163 intergenic CG11407 +,CG11453 + chr3R 19783239 intergenic CG11407 +,CG11453 + chr3R 19783315 intergenic CG11407 +,CG11453 + chr3R_14_19780001 chr3R_19780001 RAL-320 2369 chr3R 19793872 19793928 chr3R 19793985 19794041 18 110 3.5 4.5 4.0 3.6 169 chr3R 19793872 intergenic bnl - chr3R 19793956 intergenic bnl - chr3R 19794041 intergenic bnl - chr3R_18_19790001 chr3R_19790001 RAL-320 2370 chr3R 19827507 19827558 chr3R 19827613 19827664 12 102 5.5 4.0 4.8 2.1 157 chr3R 19827507 intron bnl - chr3R 19827586 intron bnl - chr3R 19827664 exon bnl - chr3R_12_19825001 chr3R_19825001 RAL-320 2371 chr3R 19830877 19830883 chr3R 19830969 19830980 5 95 1.0 5.0 3.0 1.2 103 chr3R 19830877 intron bnl - chr3R 19830928 intron bnl - chr3R 19830980 intron bnl - chr3R_5_19830001 chr3R_19830001 RAL-320 2372 chr3R 19887985 19888037 chr3R 19888097 19888149 21 105 4.5 4.5 4.5 3.8 164 chr3R 19887985 intron ninaE - chr3R 19888067 5` UTR ninaE - chr3R 19888149 5` UTR ninaE - chr3R_21_19885001 chr3R_19885001 RAL-320 2373 chr3R 19953966 19953983 chr3R 19954030 19954052 8 75 4.5 4.5 4.5 1.5 86 chr3R 19953966 intron Hs6st - chr3R 19954009 intron Hs6st - chr3R 19954052 intron Hs6st - chr3R_8_19950001 chr3R_19950001 RAL-320 2374 chr3R 20008803 20008851 chr3R 20008904 20008951 11 96 3.0 4.5 3.8 2.3 148 chr3R 20008803 intergenic MED25 +,Hs6st - chr3R 20008877 intergenic MED25 +,Hs6st - chr3R 20008951 5` UTR MED25 + chr3R_11_20005001 chr3R_20005001 RAL-320 2375 chr3R 20013182 20013230 chr3R 20013298 20013326 14 112 6.0 5.0 5.5 2.2 144 chr3R 20013182 intron CG17190 - chr3R 20013254 intron CG17190 - chr3R 20013326 intron CG17190 - chr3R_14_20010001 chr3R_20010001 RAL-320 2376 chr3R 20066095 20066146 chr3R 20066305 20066355 15 206 6.0 0.0 3.0 3.8 260 chr3R 20066095 intergenic not near genes chr3R 20066225 intergenic not near genes chr3R 20066355 intergenic not near genes chr3R_15_20065001 chr3R_20065001 RAL-320 2377 chr3R 20066538 20066549 chr3R 20066794 20066805 4 256 8.5 4.5 6.5 0.5 267 chr3R 20066538 intergenic not near genes chr3R 20066672 intergenic not near genes chr3R 20066805 intergenic not near genes chr3R_4_20065001 chr3R_20065001 RAL-320 2378 chr3R 20066550 20066582 chr3R 20066786 20066829 13 246 3.5 4.0 3.8 2.7 279 chr3R 20066550 intergenic not near genes chr3R 20066690 intergenic not near genes chr3R 20066829 intergenic not near genes chr3R_13_20065001 chr3R_20065001 RAL-320 2379 chr3R 20109526 20109563 chr3R 20114742 20114789 copia 12 5222 3.0 6.0 4.5 2.2 5263 chr3R 20109526 intergenic not near genes chr3R 20112158 intergenic not near genes chr3R 20114789 intergenic CG10887 + chr3R_12_20110001 chr3R_20110001 RAL-320 2380 chr3R 20118003 20118216 chr3R 20118109 20118290 25 98 0.5 2.5 1.5 10.0 287 chr3R 20118003 intergenic not near genes chr3R 20118146 intergenic not near genes chr3R 20118290 intergenic not near genes chr3R_25_20115001 chr3R_20115001 RAL-320 2381 chr3R 20137578 20137631 chr3R 20137688 20137698 8 90 2.0 0.0 1.0 4.0 120 chr3R 20137578 intergenic not near genes chr3R 20137638 intergenic not near genes chr3R 20137698 intergenic not near genes chr3R_8_20135001 chr3R_20135001 RAL-320 2382 chr3R 20151285 20151296 chr3R 20151436 20151447 6 151 11.5 3.0 7.2 0.7 162 chr3R 20151285 intergenic not near genes chr3R 20151366 intergenic not near genes chr3R 20151447 intergenic not near genes chr3R_6_20150001 chr3R_20150001 RAL-320 2383 chr3R 20151298 20151333 chr3R 20151434 20151484 17 148 2.5 3.0 2.8 4.5 186 chr3R 20151298 intergenic not near genes chr3R 20151391 intergenic not near genes chr3R 20151484 intergenic not near genes chr3R_17_20150001 chr3R_20150001 RAL-320 2384 chr3R 20156678 20156708 chr3R 20165868 20165871 roo 5 9181 6.0 8.0 7.0 0.6 9193 chr3R 20156678 intergenic not near genes chr3R 20161274 intergenic not near genes chr3R 20165871 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-320 2385 chr3R 20156709 20156716 chr3R 20165865 20165884 roo 5 9174 4.5 6.5 5.5 0.8 9175 chr3R 20156709 intergenic not near genes chr3R 20161296 intergenic not near genes chr3R 20165884 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-320 2386 chr3R 20205543 20205596 chr3R 20205685 20205738 14 142 4.0 2.0 3.0 3.5 195 chr3R 20205543 intron Nlg4 + chr3R 20205640 intron Nlg4 + chr3R 20205738 intron Nlg4 + chr3R_14_20205001 chr3R_20205001 RAL-320 2387 chr3R 20245276 20245298 chr3R 20248906 20248928 F-element 6 3630 5.0 0.5 2.8 1.6 3652 chr3R 20245276 3` UTR Nlg4 + chr3R 20247102 intergenic not near genes chr3R 20248928 intergenic not near genes chr3R_6_20245001 chr3R_20245001 RAL-320 2388 chr3R 20266497 20266543 chr3R 20272988 20273034 Burdock 16 6489 4.5 9.0 6.8 2.1 6537 chr3R 20266497 intron cic + chr3R 20269766 intron cic + chr3R 20273034 intron cic + chr3R_16_20265001 chr3R_20265001 RAL-320 2389 chr3R 20276442 20276483 chr3R 20276534 20276588 12 93 3.5 7.0 5.2 1.9 146 chr3R 20276442 intron cic + chr3R 20276515 intron cic + chr3R 20276588 intron cic + chr3R_12_20275001 chr3R_20275001 RAL-320 2390 chr3R 20282255 20282308 chr3R 20282351 20282404 15 96 0.5 2.5 1.5 6.0 149 chr3R 20282255 intron cic + chr3R 20282330 intron cic + chr3R 20282404 intron cic + chr3R_15_20280001 chr3R_20280001 RAL-320 2391 chr3R 20330982 20331028 chr3R 20331488 20331534 roo 18 506 5.5 7.0 6.2 2.5 552 chr3R 20330982 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331534 intergenic not near genes chr3R_18_20330001 chr3R_20330001 RAL-320 2392 chr3R 20354795 20354840 chr3R 20354893 20354938 10 97 2.0 2.0 2.0 3.3 143 chr3R 20354795 intergenic not near genes chr3R 20354866 intergenic not near genes chr3R 20354938 intergenic not near genes chr3R_10_20350001 chr3R_20350001 RAL-320 2393 chr3R 20370642 20370670 chr3R 20370973 20371009 6 337 2.0 11.0 6.5 0.8 367 chr3R 20370642 intergenic not near genes chr3R 20370826 intergenic not near genes chr3R 20371009 intergenic not near genes chr3R_6_20370001 chr3R_20370001 RAL-320 2394 chr3R 20412343 20412367 chr3R 20412451 20412485 6 112 2.5 2.5 2.5 1.7 142 chr3R 20412343 intron Gfrl - chr3R 20412414 intron Gfrl - chr3R 20412485 intron Gfrl - chr3R_6_20410001 chr3R_20410001 RAL-320 2395 chr3R 20434825 20434862 chr3R 20435030 20435067 8 205 5.0 2.0 3.5 1.8 242 chr3R 20434825 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435067 intron Gfrl - chr3R_8_20430001 chr3R_20430001 RAL-320 2396 chr3R 20506584 20506602 chr3R 20507399 20507425 BS 7 819 1.0 8.5 4.8 1.2 841 chr3R 20506584 intergenic Or92a + chr3R 20507004 intergenic CG4288 - chr3R 20507425 3` UTR CG4288 - chr3R_7_20505001 chr3R_20505001 RAL-320 2397 chr3R 20512986 20513032 chr3R 20515708 20515755 opus 12 2722 4.0 0.0 2.0 4.0 2769 chr3R 20512986 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515755 intergenic not near genes chr3R_12_20510001 chr3R_20510001 RAL-320 2398 chr3R 20555498 20555527 chr3R 20555821 20555850 11 321 10.0 3.5 6.8 1.4 352 chr3R 20555498 intron att-ORFA - chr3R 20555674 intron att-ORFA - chr3R 20555850 intron att-ORFA - chr3R_11_20555001 chr3R_20555001 RAL-320 2399 chr3R 20555529 20555543 chr3R 20555818 20555863 5 313 7.0 3.0 5.0 0.8 334 chr3R 20555529 intron att-ORFA - chr3R 20555696 intron att-ORFA - chr3R 20555863 intron att-ORFA - chr3R_5_20555001 chr3R_20555001 RAL-320 2400 chr3R 20594465 20594510 chr3R 20594570 20594620 11 109 2.5 0.0 1.2 5.0 155 chr3R 20594465 intron bon + chr3R 20594542 intron bon + chr3R 20594620 intron bon + chr3R_11_20590001 chr3R_20590001 RAL-320 2401 chr3R 20707725 20707770 chr3R 20707960 20708005 13 234 4.5 4.0 4.2 2.5 280 chr3R 20707725 intron Oamb - chr3R 20707865 intron Oamb - chr3R 20708005 intron Oamb - chr3R_13_20705001 chr3R_20705001 RAL-320 2402 chr3R 20748089 20748130 chr3R 20748189 20748230 21 97 3.5 4.5 4.0 4.2 141 chr3R 20748089 intron CG42322 + chr3R 20748160 intron CG42322 + chr3R 20748230 intron,3` UTR CG42322 +,Prosalpha4T1 - chr3R_21_20745001 chr3R_20745001 RAL-320 2403 chr3R 20771707 20771731 chr3R 20771783 20771800 15 88 0.0 6.0 3.0 3.8 93 chr3R 20771707 intron,intron Syp +,Takl1 - chr3R 20771754 intron,intron Syp +,Takl1 - chr3R 20771800 intron,exon Syp +,Takl1 - chr3R_15_20770001 chr3R_20770001 RAL-320 2404 chr3R 20787420 20787456 chr3R 20787531 20787566 12 107 5.5 6.5 6.0 1.7 146 chr3R 20787420 intron Syp + chr3R 20787493 intron Syp + chr3R 20787566 intron Syp + chr3R_12_20785001 chr3R_20785001 RAL-320 2405 chr3R 20854451 20854511 chr3R 20859266 20859310 Doc 4 4810 4.0 2.5 3.2 1.0 4859 chr3R 20854451 intron Ir93a - chr3R 20856880 intron Ir93a - chr3R 20859310 exon Ir93a - chr3R_4_20855001 chr3R_20855001 RAL-320 2406 chr3R 20874510 20874548 chr3R 20874615 20874653 13 104 3.0 0.0 1.5 5.2 143 chr3R 20874510 3` UTR TotB + chr3R 20874582 intergenic TotB + chr3R 20874653 intergenic TotB + chr3R_13_20870001 chr3R_20870001 RAL-320 2407 chr3R 20899894 20899940 chr3R 20900010 20900056 14 116 2.5 5.0 3.8 2.9 162 chr3R 20899894 intergenic not near genes chr3R 20899975 intergenic not near genes chr3R 20900056 intergenic not near genes chr3R_14_20895001 chr3R_20895001 RAL-320 2408 chr3R 20901644 20901659 chr3R 20901767 20901782 5 121 5.0 4.0 4.5 0.9 138 chr3R 20901644 intergenic CG5621 + chr3R 20901713 intergenic CG5621 + chr3R 20901782 intergenic CG5621 + chr3R_5_20900001 chr3R_20900001 RAL-320 2409 chr3R 20936066 20936105 chr3R 20936163 20936202 8 97 3.0 4.0 3.5 1.8 136 chr3R 20936066 intron CG31191 - chr3R 20936134 intron CG31191 - chr3R 20936202 intron CG31191 - chr3R_8_20935001 chr3R_20935001 RAL-320 2410 chr3R 20981600 20981637 chr3R 20982043 20982081 15 442 3.5 3.0 3.2 3.6 481 chr3R 20981600 intron Calx + chr3R 20981840 intron Calx + chr3R 20982081 intron Calx + chr3R_15_20980001 chr3R_20980001 RAL-320 2411 chr3R 20990704 20990750 chr3R 20990806 20990852 14 98 4.5 3.0 3.8 2.9 148 chr3R 20990704 intron Calx + chr3R 20990778 intron Calx + chr3R 20990852 intron Calx + chr3R_14_20990001 chr3R_20990001 RAL-320 2412 chr3R 21013997 21014043 chr3R 21014095 21014141 13 94 4.0 6.5 5.2 2.1 144 chr3R 21013997 3` UTR Calx + chr3R 21014069 3` UTR Calx + chr3R 21014141 3` UTR Calx + chr3R_13_21010001 chr3R_21010001 RAL-320 2413 chr3R 21020386 21020424 chr3R 21020476 21020506 9 91 8.5 3.0 5.8 1.3 120 chr3R 21020386 3` UTR Rlip + chr3R 21020446 3` UTR Rlip + chr3R 21020506 3` UTR Rlip + chr3R_9_21020001 chr3R_21020001 RAL-320 2414 chr3R 21074807 21074822 chr3R 21075038 21075053 7 236 1.5 9.0 5.2 1.1 246 chr3R 21074807 intron dmrt93B + chr3R 21074930 intron dmrt93B + chr3R 21075053 intron dmrt93B + chr3R_7_21070001 chr3R_21070001 RAL-320 2415 chr3R 21108019 21108064 chr3R 21108300 21108335 17 280 3.5 2.5 3.0 4.2 316 chr3R 21108019 intergenic Sec15 -,rtet + chr3R 21108177 intergenic Sec15 -,rtet + chr3R 21108335 intergenic rtet +,Sec15 - chr3R_17_21105001 chr3R_21105001 RAL-320 2416 chr3R 21132611 21132643 chr3R 21132714 21132744 4 102 3.0 0.0 1.5 1.6 133 chr3R 21132611 3` UTR Ice2 + chr3R 21132678 3` UTR Ice2 + chr3R 21132744 3` UTR CG7009 - chr3R_4_21130001 chr3R_21130001 RAL-320 2417 chr3R 21141684 21141706 chr3R 21150165 21150175 Tirant 5 8480 2.0 7.5 4.8 0.9 8491 chr3R 21141684 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150175 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 RAL-320 2418 chr3R 21154550 21154584 chr3R 21154785 21154819 18 233 5.0 2.5 3.8 3.8 269 chr3R 21154550 intron SNF4Agamma + chr3R 21154684 intron SNF4Agamma + chr3R 21154819 intron SNF4Agamma + chr3R_18_21150001 chr3R_21150001 RAL-320 2419 chr3R 21176796 21176817 chr3R 21176899 21176907 5 97 10.5 3.0 6.8 0.6 111 chr3R 21176796 intron SNF4Agamma + chr3R 21176852 intron SNF4Agamma + chr3R 21176907 intron SNF4Agamma + chr3R_5_21175001 chr3R_21175001 RAL-320 2420 chr3R 21176818 21176840 chr3R 21176890 21176918 12 89 6.0 2.5 4.2 2.3 100 chr3R 21176818 intron SNF4Agamma + chr3R 21176868 intron SNF4Agamma + chr3R 21176918 intron SNF4Agamma + chr3R_12_21175001 chr3R_21175001 RAL-320 2421 chr3R 21188382 21188408 chr3R 21188463 21188506 13 89 3.0 5.0 4.0 2.6 124 chr3R 21188382 intron SNF4Agamma + chr3R 21188444 intron SNF4Agamma + chr3R 21188506 intron SNF4Agamma + chr3R_13_21185001 chr3R_21185001 RAL-320 2422 chr3R 21189678 21189716 chr3R 21189770 21189814 12 97 8.0 4.0 6.0 1.7 136 chr3R 21189678 intron SNF4Agamma + chr3R 21189746 intron SNF4Agamma + chr3R 21189814 intron SNF4Agamma + chr3R_12_21185001 chr3R_21185001 RAL-320 2423 chr3R 21240442 21240450 chr3R 21240539 21240562 5 106 4.5 3.0 3.8 1.0 120 chr3R 21240442 intergenic not near genes chr3R 21240502 intergenic not near genes chr3R 21240562 intergenic not near genes chr3R_5_21240001 chr3R_21240001 RAL-320 2424 chr3R 21240451 21240474 chr3R 21240538 21240586 11 108 2.0 3.0 2.5 3.1 135 chr3R 21240451 intergenic not near genes chr3R 21240518 intergenic not near genes chr3R 21240586 intergenic not near genes chr3R_11_21240001 chr3R_21240001 RAL-320 2425 chr3R 21245841 21245864 chr3R 21245945 21245968 5 104 5.0 3.5 4.2 1.0 127 chr3R 21245841 intergenic CG5892 + chr3R 21245904 intergenic CG5892 + chr3R 21245968 intergenic not near genes chr3R_5_21245001 chr3R_21245001 RAL-320 2426 chr3R 21322978 21323002 chr3R 21323052 21323069 5 82 3.0 1.5 2.2 1.6 91 chr3R 21322978 intron CG16791 - chr3R 21323024 intron CG16791 - chr3R 21323069 intron CG16791 - chr3R_5_21320001 chr3R_21320001 RAL-320 2427 chr3R 21330850 21330895 chr3R 21330961 21331004 19 103 6.5 5.0 5.8 2.8 154 chr3R 21330850 intron CG16791 - chr3R 21330927 intron CG16791 - chr3R 21331004 intron CG16791 - chr3R_19_21330001 chr3R_21330001 RAL-320 2428 chr3R 21374359 21374386 chr3R 21374456 21374479 10 95 11.0 6.5 8.8 1.0 120 chr3R 21374359 intron mod(mdg4) - chr3R 21374419 intron mod(mdg4) - chr3R 21374479 intron mod(mdg4) - chr3R_10_21370001 chr3R_21370001 RAL-320 2429 chr3R 21374387 21374409 chr3R 21374454 21374506 7 91 8.5 6.0 7.2 0.9 119 chr3R 21374387 intron mod(mdg4) - chr3R 21374446 intron mod(mdg4) - chr3R 21374506 intron mod(mdg4) - chr3R_7_21370001 chr3R_21370001 RAL-320 2430 chr3R 21385916 21385950 chr3R 21386013 21386032 6 89 1.5 6.0 3.8 1.2 116 chr3R 21385916 intergenic not near genes chr3R 21385974 intergenic not near genes chr3R 21386032 intergenic not near genes chr3R_6_21385001 chr3R_21385001 RAL-320 2431 chr3R 21408565 21408612 chr3R 21408693 21408727 14 125 4.5 5.5 5.0 2.3 162 chr3R 21408565 intergenic CheB93a + chr3R 21408646 intergenic CheB93a +,CheB93b + chr3R 21408727 intergenic CheB93b +,CheB93a + chr3R_14_21405001 chr3R_21405001 RAL-320 2432 chr3R 21462409 21462454 chr3R 21462512 21462557 11 103 0.0 0.0 0.0 11.0 148 chr3R 21462409 intergenic not near genes chr3R 21462483 intergenic not near genes chr3R 21462557 intergenic not near genes chr3R_11_21460001 chr3R_21460001 RAL-320 2433 chr3R 21464384 21464422 chr3R 21464490 21464526 6 106 4.0 1.0 2.5 1.7 142 chr3R 21464384 intergenic not near genes chr3R 21464455 intergenic not near genes chr3R 21464526 intergenic not near genes chr3R_6_21460001 chr3R_21460001 RAL-320 2434 chr3R 21472013 21472034 chr3R 21472104 21472135 10 98 1.5 5.5 3.5 2.2 122 chr3R 21472013 intergenic not near genes chr3R 21472074 intergenic not near genes chr3R 21472135 intergenic not near genes chr3R_10_21470001 chr3R_21470001 RAL-320 2435 chr3R 21481368 21481400 chr3R 21481479 21481486 5 105 11.0 0.0 5.5 0.8 118 chr3R 21481368 intergenic not near genes chr3R 21481427 intergenic not near genes chr3R 21481486 intergenic not near genes chr3R_5_21480001 chr3R_21480001 RAL-320 2436 chr3R 21483792 21483830 chr3R 21483902 21483940 7 106 8.5 2.5 5.5 1.1 148 chr3R 21483792 exon CG7922 + chr3R 21483866 intron CG7922 + chr3R 21483940 intron CG7922 + chr3R_7_21480001 chr3R_21480001 RAL-320 2437 chr3R 21518011 21518270 chr3R 21518160 21518374 6 116 0.0 0.0 0.0 6.0 363 chr3R 21518011 intergenic not near genes chr3R 21518192 intergenic not near genes chr3R 21518374 intergenic not near genes chr3R_6_21515001 chr3R_21515001 RAL-320 2438 chr3R 21519970 21520133 chr3R 21520091 21520247 27 117 1.0 1.0 1.0 13.5 277 chr3R 21519970 intergenic not near genes chr3R 21520108 intergenic not near genes chr3R 21520247 intergenic not near genes chr3R_27_21520001 chr3R_21520001 RAL-320 2439 chr3R 21535354 21535391 chr3R 21535489 21535526 8 135 1.0 8.5 4.8 1.4 172 chr3R 21535354 5` UTR CR44033 + chr3R 21535440 intergenic CR44033 + chr3R 21535526 intergenic CR44033 + chr3R_8_21535001 chr3R_21535001 RAL-320 2440 chr3R 21545599 21545630 chr3R 21545675 21545697 6 79 4.0 7.5 5.8 0.9 98 chr3R 21545599 intergenic not near genes chr3R 21545648 intergenic not near genes chr3R 21545697 intergenic not near genes chr3R_6_21545001 chr3R_21545001 RAL-320 2441 chr3R 21554817 21554856 chr3R 21554931 21554970 8 114 4.0 5.0 4.5 1.5 153 chr3R 21554817 intron slou - chr3R 21554894 intron slou - chr3R 21554970 intron slou - chr3R_8_21550001 chr3R_21550001 RAL-320 2442 chr3R 21725666 21725686 chr3R 21725821 21725842 6 156 0.0 7.0 3.5 1.3 176 chr3R 21725666 intergenic not near genes chr3R 21725754 intergenic not near genes chr3R 21725842 intergenic not near genes chr3R_6_21725001 chr3R_21725001 RAL-320 2443 chr3R 21758681 21758714 chr3R 21758766 21758789 9 83 5.5 11.0 8.2 1.0 108 chr3R 21758681 intergenic CG42335 + chr3R 21758735 intergenic CG42335 + chr3R 21758789 exon CG42335 + chr3R_9_21755001 chr3R_21755001 RAL-320 2444 chr3R 21761109 21761154 chr3R 21768521 21768549 mdg1 12 7407 3.0 10.5 6.8 1.5 7440 chr3R 21761109 exon CG42335 + chr3R 21764829 intron CG42335 + chr3R 21768549 exon CG42335 + chr3R_12_21760001 chr3R_21760001 RAL-320 2445 chr3R 21907534 21907534 chr3R 28831801 28831802 12 6924268 23.0 16.5 19.8 0.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-320 2446 chr3R 9620954 9620956 chr3R 21907535 21907535 4 12286580 16.5 20.0 18.2 0.2 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-320 2447 chr3R 21907535 21907535 chr3R 28831801 28831801 14 6924266 22.5 16.5 19.5 0.7 6924266 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-320 2448 chr3R 21907536 21907536 chr3R 28831801 28831802 25 6924266 22.0 16.5 19.2 1.2 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-320 2449 chr3R 21938037 21938083 chr3R 21938215 21938224 14 170 0.0 3.0 1.5 5.6 187 chr3R 21938037 intergenic not near genes chr3R 21938130 intergenic not near genes chr3R 21938224 intergenic not near genes chr3R_14_21935001 chr3R_21935001 RAL-320 2450 chr3R 21991392 21991439 chr3R 21991939 21991985 13 542 3.5 4.0 3.8 2.7 593 chr3R 21991392 intron Eip93F + chr3R 21991688 intron Eip93F + chr3R 21991985 intron Eip93F + chr3R_13_21990001 chr3R_21990001 RAL-320 2451 chr3R 22013042 22013084 chr3R 22013144 22013186 4 100 2.0 1.0 1.5 1.6 144 chr3R 22013042 intergenic not near genes chr3R 22013114 intergenic not near genes chr3R 22013186 intergenic not near genes chr3R_4_22010001 chr3R_22010001 RAL-320 2452 chr3R 22055559 22055572 chr3R 22055768 22055781 6 207 1.5 8.5 5.0 1.0 222 chr3R 22055559 intron how + chr3R 22055670 intron how + chr3R 22055781 intron how + chr3R_6_22055001 chr3R_22055001 RAL-320 2453 chr3R 22055579 22055588 chr3R 22055758 22055767 4 188 1.0 8.5 4.8 0.7 188 chr3R 22055579 intron how + chr3R 22055673 intron how + chr3R 22055767 intron how + chr3R_4_22055001 chr3R_22055001 RAL-320 2454 chr3R 22084607 22084626 chr3R 22084696 22084735 12 104 1.5 1.0 1.2 5.5 128 chr3R 22084607 intergenic not near genes chr3R 22084671 intergenic not near genes chr3R 22084735 intergenic not near genes chr3R_12_22080001 chr3R_22080001 RAL-320 2455 chr3R 22089322 22089372 chr3R 22089972 22090022 14 653 33.5 26.0 29.8 0.5 700 chr3R 22089322 intron CG5778 - chr3R 22089672 intron CG5778 - chr3R 22090022 intron CG5778 - chr3R_14_22085001 chr3R_22085001 RAL-320 2456 chr3R 22234076 22234096 chr3R 22234173 22234193 8 97 2.5 7.5 5.0 1.3 117 chr3R 22234076 intron SKIP + chr3R 22234134 intron SKIP + chr3R 22234193 intron SKIP + chr3R_8_22230001 chr3R_22230001 RAL-320 2457 chr3R 22234697 22234704 chr3R 22236005 22236008 pogo 4 1313 2.5 0.0 1.2 1.8 1311 chr3R 22234697 intron SKIP + chr3R 22235352 intron SKIP + chr3R 22236008 intron SKIP + chr3R_4_22235001 chr3R_22235001 RAL-320 2458 chr3R 22239471 22239524 chr3R 22248551 22248590 roo 11 9072 2.5 0.0 1.2 5.0 9119 chr3R 22239471 intron SKIP + chr3R 22244030 intron SKIP + chr3R 22248590 intron SKIP + chr3R_11_22240001 chr3R_22240001 RAL-320 2459 chr3R 22336081 22336110 chr3R 22336195 22336224 8 111 4.5 2.0 3.2 1.9 143 chr3R 22336081 intron CG5388 - chr3R 22336152 intron CG5388 - chr3R 22336224 intron CG5388 - chr3R_8_22335001 chr3R_22335001 RAL-320 2460 chr3R 22428556 22428609 chr3R 22428652 22428688 19 91 3.5 4.0 3.8 4.0 132 chr3R 22428556 intron CG13847 - chr3R 22428622 intron CG13847 - chr3R 22428688 intron CG13847 - chr3R_19_22425001 chr3R_22425001 RAL-320 2461 chr3R 22433072 22433101 chr3R 22433192 22433217 8 118 6.5 10.5 8.5 0.8 145 chr3R 22433072 intron CG13847 - chr3R 22433144 intron CG13847 - chr3R 22433217 intron CG13847 - chr3R_8_22430001 chr3R_22430001 RAL-320 2462 chr3R 22450561 22450573 chr3R 22453186 22453223 NOF 5 2641 5.5 6.0 5.8 0.7 2662 chr3R 22450561 intron CG34376 + chr3R 22451892 intron CG34376 + chr3R 22453223 intron CG34376 + chr3R_5_22450001 chr3R_22450001 RAL-320 2463 chr3R 22450574 22450579 chr3R 22453184 22453209 NOF 5 2629 4.5 6.0 5.2 0.8 2635 chr3R 22450574 intron CG34376 + chr3R 22451892 intron CG34376 + chr3R 22453209 intron CG34376 + chr3R_5_22450001 chr3R_22450001 RAL-320 2464 chr3R 22538438 22538465 chr3R 22538537 22538570 8 100 2.5 9.0 5.8 1.2 132 chr3R 22538438 intron CG5326 - chr3R 22538504 intron CG5326 - chr3R 22538570 intron CG5326 - chr3R_8_22535001 chr3R_22535001 RAL-320 2465 chr3R 22538466 22538470 chr3R 22538536 22538574 4 91 2.0 8.5 5.2 0.6 108 chr3R 22538466 intron CG5326 - chr3R 22538520 intron CG5326 - chr3R 22538574 intron CG5326 - chr3R_4_22535001 chr3R_22535001 RAL-320 2466 chr3R 22672282 22672335 chr3R 22672395 22672428 11 108 4.0 1.0 2.5 3.1 146 chr3R 22672282 intron wake + chr3R 22672355 intron wake + chr3R 22672428 intron wake + chr3R_11_22670001 chr3R_22670001 RAL-320 2467 chr3R 22684199 22684217 chr3R 22684286 22684296 7 92 8.0 4.5 6.2 1.0 97 chr3R 22684199 intergenic not near genes chr3R 22684248 intergenic not near genes chr3R 22684296 intergenic not near genes chr3R_7_22680001 chr3R_22680001 RAL-320 2468 chr3R 22684219 22684240 chr3R 22684285 22684336 8 82 2.5 4.5 3.5 1.8 117 chr3R 22684219 intergenic not near genes chr3R 22684278 intergenic not near genes chr3R 22684336 intergenic not near genes chr3R_8_22680001 chr3R_22680001 RAL-320 2469 chr3R 22797754 22797936 chr3R 22797847 22798050 16 104 0.0 0.0 0.0 16.0 296 chr3R 22797754 intergenic not near genes chr3R 22797902 intergenic not near genes chr3R 22798050 intergenic not near genes chr3R_16_22795001 chr3R_22795001 RAL-320 2470 chr3R 22860133 22860180 chr3R 22860245 22860292 21 109 5.5 4.0 4.8 3.6 159 chr3R 22860133 intergenic not near genes chr3R 22860212 intergenic not near genes chr3R 22860292 intergenic not near genes chr3R_21_22860001 chr3R_22860001 RAL-320 2471 chr3R 22877289 22877329 chr3R 22877430 22877477 7 141 2.5 3.5 3.0 1.8 188 chr3R 22877289 intergenic not near genes chr3R 22877383 intergenic not near genes chr3R 22877477 intergenic not near genes chr3R_7_22875001 chr3R_22875001 RAL-320 2472 chr3R 22880608 22880614 chr3R 22880680 22880699 4 75 5.0 10.0 7.5 0.5 91 chr3R 22880608 intergenic not near genes chr3R 22880654 intergenic not near genes chr3R 22880699 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-320 2473 chr3R 22880913 22880959 chr3R 22881071 22881117 16 157 2.5 2.0 2.2 5.0 204 chr3R 22880913 intergenic not near genes chr3R 22881015 intergenic not near genes chr3R 22881117 intergenic not near genes chr3R_16_22880001 chr3R_22880001 RAL-320 2474 chr3R 22881183 22881203 chr3R 22884908 22884924 Doc 9 3725 8.5 5.5 7.0 1.1 3741 chr3R 22881183 intergenic not near genes chr3R 22883054 intergenic not near genes chr3R 22884924 intergenic not near genes chr3R_9_22880001 chr3R_22880001 RAL-320 2475 chr3R 22968649 22968683 chr3R 22968766 22968793 8 113 5.0 1.0 3.0 2.0 144 chr3R 22968649 intergenic not near genes chr3R 22968721 intergenic not near genes chr3R 22968793 intergenic not near genes chr3R_8_22965001 chr3R_22965001 RAL-320 2476 chr3R 22971260 22971264 chr3R 22971349 22971357 4 98 5.5 10.5 8.0 0.4 97 chr3R 22971260 intergenic not near genes chr3R 22971308 intergenic not near genes chr3R 22971357 intergenic not near genes chr3R_4_22970001 chr3R_22970001 RAL-320 2477 chr3R 22979744 22979774 chr3R 22979834 22979835 4 84 3.0 7.5 5.2 0.6 91 chr3R 22979744 intergenic not near genes chr3R 22979790 intergenic not near genes chr3R 22979835 intergenic not near genes chr3R_4_22975001 chr3R_22975001 RAL-320 2478 chr3R 23021311 23021365 chr3R 23021409 23021463 20 93 4.5 2.5 3.5 4.4 152 chr3R 23021311 3` UTR lmd - chr3R 23021387 3` UTR lmd - chr3R 23021463 3` UTR lmd - chr3R_20_23020001 chr3R_23020001 RAL-320 2479 chr3R 23056598 23056651 chr3R 23056754 23056757 13 148 4.0 4.5 4.2 2.5 159 chr3R 23056598 intron CG17119 - chr3R 23056678 intron CG17119 - chr3R 23056757 intron CG17119 - chr3R_13_23055001 chr3R_23055001 RAL-320 2480 chr3R 23101387 23101409 chr3R 23101473 23101519 11 95 1.5 1.5 1.5 4.4 132 chr3R 23101387 intron CG13830 - chr3R 23101453 intron CG13830 - chr3R 23101519 intron CG13830 - chr3R_11_23100001 chr3R_23100001 RAL-320 2481 chr3R 23197944 23197968 chr3R 23198039 23198067 8 98 3.5 3.0 3.2 1.9 123 chr3R 23197944 exon cnc - chr3R 23198006 intron cnc - chr3R 23198067 intron cnc - chr3R_8_23195001 chr3R_23195001 RAL-320 2482 chr3R 23211967 23211991 chr3R 23212064 23212088 10 92 2.0 4.0 3.0 2.5 121 chr3R 23211967 intron cnc - chr3R 23212028 intron cnc - chr3R 23212088 intron cnc - chr3R_10_23210001 chr3R_23210001 RAL-320 2483 chr3R 23229048 23229061 chr3R 23229135 23229147 5 91 6.5 8.0 7.2 0.6 99 chr3R 23229048 3` UTR CG4467 - chr3R 23229098 3` UTR CG4467 - chr3R 23229147 3` UTR CG4467 - chr3R_5_23225001 chr3R_23225001 RAL-320 2484 chr3R 23229063 23229087 chr3R 23229133 23229183 7 89 3.5 9.0 6.2 1.0 120 chr3R 23229063 3` UTR CG4467 - chr3R 23229123 3` UTR CG4467 - chr3R 23229183 3` UTR CG4467 - chr3R_7_23225001 chr3R_23225001 RAL-320 2485 chr3R 23245969 23246025 chr3R 23246071 23246073 11 86 3.5 3.5 3.5 2.4 104 chr3R 23245969 intron CG4467 - chr3R 23246021 intron CG4467 - chr3R 23246073 intron CG4467 - chr3R_11_23245001 chr3R_23245001 RAL-320 2486 chr3R 23260937 23260990 chr3R 23261039 23261093 12 91 4.0 2.5 3.2 2.9 156 chr3R 23260937 3` UTR orb - chr3R 23261015 3` UTR orb - chr3R 23261093 3` UTR orb - chr3R_12_23260001 chr3R_23260001 RAL-320 2487 chr3R 23318387 23318402 chr3R 23318514 23318529 5 127 0.0 6.5 3.2 1.2 142 chr3R 23318387 intron pnt - chr3R 23318458 intron pnt - chr3R 23318529 intron pnt - chr3R_5_23315001 chr3R_23315001 RAL-320 2488 chr3R 23346827 23346861 chr3R 23346925 23346959 7 98 4.0 4.0 4.0 1.4 132 chr3R 23346827 intergenic not near genes chr3R 23346893 intergenic not near genes chr3R 23346959 intergenic not near genes chr3R_7_23345001 chr3R_23345001 RAL-320 2489 chr3R 23357005 23357012 chr3R 23357108 23357118 4 105 6.0 4.0 5.0 0.7 113 chr3R 23357005 intron Sec13 + chr3R 23357062 intron Sec13 + chr3R 23357118 intron Sec13 + chr3R_4_23355001 chr3R_23355001 RAL-320 2490 chr3R 23487263 23487316 chr3R 23487394 23487443 17 128 3.5 8.0 5.8 2.5 180 chr3R 23487263 intergenic Ir94h + chr3R 23487353 intergenic Ir94h + chr3R 23487443 intergenic Ir94h + chr3R_17_23485001 chr3R_23485001 RAL-320 2491 chr3R 23548060 23548102 chr3R 23548377 23548397 12 306 4.5 5.0 4.8 2.1 337 chr3R 23548060 intergenic not near genes chr3R 23548228 intergenic not near genes chr3R 23548397 intergenic not near genes chr3R_12_23545001 chr3R_23545001 RAL-320 2492 chr3R 23558384 23558410 chr3R 23560185 23560195 Bari1 8 1799 6.5 0.0 3.2 1.9 1811 chr3R 23558384 intron beat-IV + chr3R 23559290 intron beat-IV + chr3R 23560195 intron beat-IV + chr3R_8_23555001 chr3R_23555001 RAL-320 2493 chr3R 23627534 23627640 chr3R 23627631 23627729 15 90 1.5 1.5 1.5 6.0 195 chr3R 23627534 intron CG31145 - chr3R 23627632 intron CG31145 - chr3R 23627729 intron CG31145 - chr3R_15_23625001 chr3R_23625001 RAL-320 2494 chr3R 23676778 23676822 chr3R 23676906 23676950 12 125 8.5 2.0 5.2 1.9 172 chr3R 23676778 intergenic not near genes chr3R 23676864 intergenic CG13822 + chr3R 23676950 intergenic CG13822 + chr3R_12_23675001 chr3R_23675001 RAL-320 2495 chr3R 23684720 23684725 chr3R 23685181 23685190 roo 5 473 3.0 4.0 3.5 1.1 470 chr3R 23684720 intron CG18754 + chr3R 23684955 intron CG18754 + chr3R 23685190 exon CG18754 + chr3R_5_23680001 chr3R_23680001 RAL-320 2496 chr3R 23846095 23846151 chr3R 23846200 23846211 12 88 5.5 4.5 5.0 2.0 116 chr3R 23846095 intron CG34355 + chr3R 23846153 intron CG34355 + chr3R 23846211 intron CG34355 + chr3R_12_23845001 chr3R_23845001 RAL-320 2497 chr3R 23851069 23851090 chr3R 23858756 23858772 opus 5 7686 1.5 6.0 3.8 1.0 7703 chr3R 23851069 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858772 intergenic not near genes chr3R_5_23850001 chr3R_23850001 RAL-320 2498 chr3R 23944891 23944930 chr3R 23944996 23945027 13 103 3.5 3.0 3.2 3.1 136 chr3R 23944891 intron CG12268 - chr3R 23944959 intron CG12268 - chr3R 23945027 exon CG12268 - chr3R_13_23940001 chr3R_23940001 RAL-320 2499 chr3R 23949021 23949069 chr3R 23949118 23949166 21 91 1.0 5.0 3.0 5.2 145 chr3R 23949021 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949166 intergenic not near genes chr3R_21_23945001 chr3R_23945001 RAL-320 2500 chr3R 23969837 23969869 chr3R 23969915 23969943 14 79 3.5 6.0 4.8 2.4 106 chr3R 23969837 intron CG31140 + chr3R 23969890 intron CG31140 + chr3R 23969943 intron CG31140 + chr3R_14_23965001 chr3R_23965001 RAL-320 2501 chr3R 24011658 24011662 chr3R 24011751 24011765 4 100 4.0 3.0 3.5 0.9 107 chr3R 24011658 intron KrT95D - chr3R 24011712 intron KrT95D - chr3R 24011765 intron KrT95D - chr3R_4_24010001 chr3R_24010001 RAL-320 2502 chr3R 24072079 24072118 chr3R 24072527 24072541 jockey 7 445 7.5 2.5 5.0 1.2 462 chr3R 24072079 intron 4EHP - chr3R 24072310 intron 4EHP - chr3R 24072541 intron 4EHP - chr3R_7_24070001 chr3R_24070001 RAL-320 2503 chr3R 24076912 24076945 chr3R 24078386 24078415 hobo 12 1481 3.0 6.5 4.8 2.1 1503 chr3R 24076912 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078415 intron 4EHP - chr3R_12_24075001 chr3R_24075001 RAL-320 2504 chr3R 24173548 24173581 chr3R 24173650 24173683 5 102 4.5 6.5 5.5 0.8 135 chr3R 24173548 intron CG13606 + chr3R 24173616 intron CG13606 + chr3R 24173683 intron CG13606 + chr3R_5_24170001 chr3R_24170001 RAL-320 2505 chr3R 24275032 24275063 chr3R 24275128 24275160 6 97 4.0 8.0 6.0 0.9 128 chr3R 24275032 exon Orct2 + chr3R 24275096 exon Orct2 + chr3R 24275160 3` UTR Orct2 + chr3R_6_24275001 chr3R_24275001 RAL-320 2506 chr3R 24296309 24296341 chr3R 24296750 24296792 12 446 1.0 4.0 2.5 3.4 483 chr3R 24296309 intron crb + chr3R 24296550 intron crb + chr3R 24296792 intron crb + chr3R_12_24295001 chr3R_24295001 RAL-320 2507 chr3R 24303990 24304033 chr3R 24304090 24304131 16 99 3.0 2.0 2.5 4.6 141 chr3R 24303990 intron crb + chr3R 24304060 intron crb + chr3R 24304131 intron crb + chr3R_16_24300001 chr3R_24300001 RAL-320 2508 chr3R 24359620 24359633 chr3R 24359728 24359741 5 107 5.0 12.0 8.5 0.5 121 chr3R 24359620 intron CG18528 - chr3R 24359680 intron CG18528 - chr3R 24359741 intron CG18528 - chr3R_5_24355001 chr3R_24355001 RAL-320 2509 chr3R 24366439 24366488 chr3R 24366936 24366979 13 495 64.0 63.5 63.8 0.2 540 chr3R 24366439 intergenic CG42811 -,CG13613 + chr3R 24366709 intron CG42811 - chr3R 24366979 exon CG42811 - chr3R_13_24365001 chr3R_24365001 RAL-320 2510 chr3R 24366341 24366396 chr3R 24369485 24369540 18 3146 44.0 42.5 43.2 0.4 3199 chr3R 24366341 exon CG13613 + chr3R 24367940 exon CG42812 - chr3R 24369540 intergenic CG13614 +,CG33341 + chr3R_18_24365001 chr3R_24365001 RAL-320 2511 chr3R 21907534 21907535 chr3R 24389465 24389465 7 2481930 22.5 23.0 22.8 0.3 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_7_23145001 chr3R_23145001 RAL-320 2512 chr3R 24402050 24402099 chr3R 24402140 24402189 17 86 5.0 3.5 4.2 3.3 139 chr3R 24402050 intron nAChRalpha1 - chr3R 24402120 intron nAChRalpha1 - chr3R 24402189 intron nAChRalpha1 - chr3R_17_24400001 chr3R_24400001 RAL-320 2513 chr3R 24431590 24431626 chr3R 24431681 24431692 11 95 4.0 0.0 2.0 3.7 102 chr3R 24431590 intron nAChRalpha1 - chr3R 24431641 intron nAChRalpha1 - chr3R 24431692 intron nAChRalpha1 - chr3R_11_24430001 chr3R_24430001 RAL-320 2514 chr3R 24434219 24434268 chr3R 24434317 24434366 9 95 7.0 3.0 5.0 1.5 147 chr3R 24434219 intron nAChRalpha1 - chr3R 24434292 intron nAChRalpha1 - chr3R 24434366 intron nAChRalpha1 - chr3R_9_24430001 chr3R_24430001 RAL-320 2515 chr3R 24491627 24491658 chr3R 24491709 24491756 4 86 6.5 0.0 3.2 1.0 129 chr3R 24491627 intergenic nAChRalpha2 + chr3R 24491692 intergenic not near genes chr3R 24491756 intergenic not near genes chr3R_4_24490001 chr3R_24490001 RAL-320 2516 chr3R 24493044 24493064 chr3R 24493150 24493164 9 102 8.0 6.5 7.2 1.1 120 chr3R 24493044 intergenic not near genes chr3R 24493104 intergenic not near genes chr3R 24493164 intergenic not near genes chr3R_9_24490001 chr3R_24490001 RAL-320 2517 chr3R 24493066 24493085 chr3R 24493149 24493160 4 88 4.5 6.0 5.2 0.6 94 chr3R 24493066 intergenic not near genes chr3R 24493113 intergenic not near genes chr3R 24493160 intergenic not near genes chr3R_4_24490001 chr3R_24490001 RAL-320 2518 chr3R 24493286 24493302 chr3R 24493529 24493540 BS 7 243 7.0 4.5 5.8 1.0 254 chr3R 24493286 intergenic not near genes chr3R 24493413 intergenic not near genes chr3R 24493540 intergenic not near genes chr3R_7_24490001 chr3R_24490001 RAL-320 2519 chr3R 24523884 24523925 chr3R 24523990 24524031 9 100 2.5 1.0 1.8 3.2 147 chr3R 24523884 intergenic CG13622 - chr3R 24523958 intergenic CG13622 - chr3R 24524031 intergenic CG13622 - chr3R_9_24520001 chr3R_24520001 RAL-320 2520 chr3R 24548540 24548593 chr3R 24548644 24548697 23 102 5.5 5.0 5.2 3.7 157 chr3R 24548540 intron Esyt2 + chr3R 24548618 intron Esyt2 + chr3R 24548697 intron Esyt2 + chr3R_23_24545001 chr3R_24545001 RAL-320 2521 chr3R 24605552 24605557 chr3R 24605659 24605664 5 106 9.0 11.0 10.0 0.5 112 chr3R 24605552 intron mld + chr3R 24605608 intron mld + chr3R 24605664 intron mld + chr3R_5_24605001 chr3R_24605001 RAL-320 2522 chr3R 24612493 24612534 chr3R 24612655 24612693 12 164 2.0 1.0 1.5 4.8 200 chr3R 24612493 intron mld + chr3R 24612593 intron mld + chr3R 24612693 intron mld + chr3R_12_24610001 chr3R_24610001 RAL-320 2523 chr3R 24624367 24624383 chr3R 24624476 24624492 7 109 0.5 7.5 4.0 1.4 125 chr3R 24624367 intron Syx18 - chr3R 24624430 intron Syx18 - chr3R 24624492 exon Syx18 - chr3R_7_24620001 chr3R_24620001 RAL-320 2524 chr3R 24665375 24665414 chr3R 24665566 24665610 12 191 4.5 6.5 5.5 1.8 235 chr3R 24665375 5` UTR slo + chr3R 24665492 intron slo + chr3R 24665610 intron slo + chr3R_12_24665001 chr3R_24665001 RAL-320 2525 chr3R 24670141 24670195 chr3R 24670245 24670299 13 103 3.5 2.5 3.0 3.2 158 chr3R 24670141 intron slo + chr3R 24670220 intron slo + chr3R 24670299 intron slo + chr3R_13_24670001 chr3R_24670001 RAL-320 2526 chr3R 24671232 24671254 chr3R 24671297 24671350 9 77 4.0 3.0 3.5 2.0 118 chr3R 24671232 intron slo + chr3R 24671291 intron slo + chr3R 24671350 intron slo + chr3R_9_24670001 chr3R_24670001 RAL-320 2527 chr3R 24714676 24714695 chr3R 24714767 24714789 10 94 6.5 2.0 4.2 1.9 113 chr3R 24714676 intron CG13627 + chr3R 24714732 intron CG13627 + chr3R 24714789 intron CG13627 + chr3R_10_24710001 chr3R_24710001 RAL-320 2528 chr3R 24730086 24730108 chr3R 24732469 24732501 Doc 5 2394 6.0 1.0 3.5 1.1 2415 chr3R 24730086 intron tok + chr3R 24731294 intron tok + chr3R 24732501 intron tok + chr3R_5_24730001 chr3R_24730001 RAL-320 2529 chr3R 24730113 24730118 chr3R 24732466 24732501 Doc 4 2370 4.5 1.0 2.8 1.1 2388 chr3R 24730113 intron tok + chr3R 24731307 intron tok + chr3R 24732501 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-320 2530 chr3R 24787531 24787556 chr3R 24787627 24787642 6 94 1.5 2.0 1.8 2.1 111 chr3R 24787531 intergenic CG5805 - chr3R 24787586 intergenic CG5805 -,Ets96B + chr3R 24787642 intergenic CG5805 -,Ets96B + chr3R_6_24785001 chr3R_24785001 RAL-320 2531 chr3R 24789963 24790009 chr3R 24790128 24790168 13 159 5.5 3.0 4.2 2.5 205 chr3R 24789963 intron,5` UTR Ets96B +,CG13634 - chr3R 24790066 intron,5` UTR Ets96B +,CG13634 - chr3R 24790168 intron Ets96B + chr3R_13_24790001 chr3R_24790001 RAL-320 2532 chr3R 24854868 24854914 chr3R 24854970 24855016 10 102 1.5 6.0 3.8 2.1 148 chr3R 24854868 3` UTR,3` UTR nct +,HdacX - chr3R 24854942 3` UTR HdacX - chr3R 24855016 3` UTR HdacX - chr3R_10_24850001 chr3R_24850001 RAL-320 2533 chr3R 24927119 24927155 chr3R 24931930 24931947 Doc 12 4807 6.0 2.5 4.2 2.3 4828 chr3R 24927119 intergenic Trf4-2 + chr3R 24929533 intergenic not near genes chr3R 24931947 intergenic CG11771 + chr3R_12_24925001 chr3R_24925001 RAL-320 2534 chr3R 25004903 25004920 chr3R 25004990 25005022 4 97 1.5 4.5 3.0 1.0 119 chr3R 25004903 intron tnc + chr3R 25004962 intron tnc + chr3R 25005022 intron tnc + chr3R_4_25000001 chr3R_25000001 RAL-320 2535 chr3R 25027516 25027570 chr3R 25027749 25027803 27 228 4.5 7.0 5.8 4.0 287 chr3R 25027516 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027803 intron Hr96 + chr3R_27_25025001 chr3R_25025001 RAL-320 2536 chr3R 25041180 25041230 chr3R 25041278 25041331 16 100 5.5 2.0 3.8 3.3 151 chr3R 25041180 intron 5PtaseI - chr3R 25041256 intron 5PtaseI - chr3R 25041331 intron 5PtaseI - chr3R_16_25040001 chr3R_25040001 RAL-320 2537 chr3R 25079360 25079405 chr3R 25079813 25079857 14 452 3.0 4.5 3.8 2.9 497 chr3R 25079360 intergenic not near genes chr3R 25079608 intergenic not near genes chr3R 25079857 intergenic not near genes chr3R_14_25075001 chr3R_25075001 RAL-320 2538 chr3R 25136378 25136425 chr3R 25136478 25136518 14 98 5.0 5.0 5.0 2.3 140 chr3R 25136378 3` UTR Bili + chr3R 25136448 3` UTR Bili + chr3R 25136518 3` UTR Bili + chr3R_14_25135001 chr3R_25135001 RAL-320 2539 chr3R 25173638 25173657 chr3R 25173961 25174003 6 335 6.5 4.0 5.2 1.0 365 chr3R 25173638 intron lobo - chr3R 25173820 intron lobo - chr3R 25174003 intron lobo - chr3R_6_25170001 chr3R_25170001 RAL-320 2540 chr3R 25203330 25203373 chr3R 25203480 25203523 14 147 6.0 7.0 6.5 1.9 193 chr3R 25203330 intron,intron Cad96Ca -,CG13654 + chr3R 25203426 intron,intron Cad96Ca -,CG13654 + chr3R 25203523 intron,intron Cad96Ca -,CG13654 + chr3R_14_25200001 chr3R_25200001 RAL-320 2541 chr3R 25209578 25209624 chr3R 25209680 25209726 14 101 0.0 3.5 1.8 5.0 148 chr3R 25209578 intron CG13654 + chr3R 25209652 intron CG13654 + chr3R 25209726 intron CG13654 + chr3R_14_25205001 chr3R_25205001 RAL-320 2542 chr3R 25235799 25235847 chr3R 25235899 25235947 11 100 1.5 2.5 2.0 3.7 148 chr3R 25235799 intergenic CG10420 - chr3R 25235873 intergenic CG10420 - chr3R 25235947 intergenic CG10420 - chr3R_11_25235001 chr3R_25235001 RAL-320 2543 chr3R 25241813 25241828 chr3R 25241883 25241895 7 85 3.0 3.5 3.2 1.7 82 chr3R 25241813 intergenic to +,CG11854 + chr3R 25241854 intergenic CG11854 +,to + chr3R 25241895 intergenic CG11854 +,to + chr3R_7_25240001 chr3R_25240001 RAL-320 2544 chr3R 25270745 25270777 chr3R 25270829 25270863 8 80 0.0 6.0 3.0 2.0 118 chr3R 25270745 exon,5` UTR CG11889 +,CG11891 + chr3R 25270804 exon,5` UTR CG11889 +,CG11891 + chr3R 25270863 exon,5` UTR CG11889 +,CG11891 + chr3R_8_25270001 chr3R_25270001 RAL-320 2545 chr3R 25368459 25368488 chr3R 25368597 25368621 12 137 7.0 0.0 3.5 2.7 162 chr3R 25368459 intron Fur1 - chr3R 25368540 intron Fur1 - chr3R 25368621 intron Fur1 - chr3R_12_25365001 chr3R_25365001 RAL-320 2546 chr3R 25422045 25422090 chr3R 25422146 25422166 12 98 6.0 0.0 3.0 3.0 121 chr3R 25422045 intron Fur1 - chr3R 25422106 intron Fur1 - chr3R 25422166 intron Fur1 - chr3R_12_25420001 chr3R_25420001 RAL-320 2547 chr3R 25431416 25431446 chr3R 25431520 25431547 7 105 3.0 3.0 3.0 1.8 131 chr3R 25431416 intron Fur1 - chr3R 25431482 intron Fur1 - chr3R 25431547 intron Fur1 - chr3R_7_25430001 chr3R_25430001 RAL-320 2548 chr3R 25440786 25440985 chr3R 25440871 25441082 7 97 0.0 0.0 0.0 7.0 296 chr3R 25440786 intron Fur1 - chr3R 25440934 intron Fur1 - chr3R 25441082 intron Fur1 - chr3R_7_25440001 chr3R_25440001 RAL-320 2549 chr3R 25441815 25441855 chr3R 25442079 25442119 10 263 5.0 1.5 3.2 2.4 304 chr3R 25441815 intron Fur1 - chr3R 25441967 intron Fur1 - chr3R 25442119 intron Fur1 - chr3R_10_25440001 chr3R_25440001 RAL-320 2550 chr3R 25576855 25576864 chr3R 25576939 25576940 8 104 3.5 5.0 4.2 1.5 85 chr3R 25576855 intron msi + chr3R 25576898 intron msi + chr3R 25576940 intron msi + chr3R_8_25575001 chr3R_25575001 RAL-320 2551 chr3R 25621028 25621075 chr3R 25621124 25621171 8 91 4.0 4.5 4.2 1.5 143 chr3R 25621028 intron Npl4 - chr3R 25621100 intron Npl4 - chr3R 25621171 intron Npl4 - chr3R_8_25620001 chr3R_25620001 RAL-320 2552 chr3R 25661262 25661305 chr3R 25661361 25661404 5 92 1.5 4.0 2.8 1.3 142 chr3R 25661262 5` UTR Tnks - chr3R 25661333 intergenic Tnks -,CR45208 -,RASSF8 + chr3R 25661404 intergenic Tnks -,CR45208 -,RASSF8 + chr3R_5_25660001 chr3R_25660001 RAL-320 2553 chr3R 25689111 25689158 chr3R 25689239 25689242 12 123 5.0 3.0 4.0 2.4 131 chr3R 25689111 intergenic not near genes chr3R 25689176 intergenic not near genes chr3R 25689242 intergenic not near genes chr3R_12_25685001 chr3R_25685001 RAL-320 2554 chr3R 25703831 25703874 chr3R 25703926 25703975 15 88 2.0 2.5 2.2 4.7 144 chr3R 25703831 intron LpR2 - chr3R 25703903 intron LpR2 - chr3R 25703975 intron LpR2 - chr3R_15_25700001 chr3R_25700001 RAL-320 2555 chr3R 25725815 25725860 chr3R 25734992 25735040 roo 9 9179 2.0 3.5 2.8 2.4 9225 chr3R 25725815 intron LpR2 - chr3R 25730428 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_9_25730001 chr3R_25730001 RAL-320 2556 chr3R 25738622 25738627 chr3R 25738730 25738735 4 108 7.5 5.5 6.5 0.5 113 chr3R 25738622 intron LpR2 - chr3R 25738678 intron LpR2 - chr3R 25738735 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-320 2557 chr3R 25738633 25738652 chr3R 25738720 25738760 13 94 3.5 5.0 4.2 2.5 127 chr3R 25738633 intron LpR2 - chr3R 25738696 intron LpR2 - chr3R 25738760 intron LpR2 - chr3R_13_25735001 chr3R_25735001 RAL-320 2558 chr3R 25738654 25738665 chr3R 25738717 25738773 6 99 2.0 5.0 3.5 1.3 119 chr3R 25738654 intron LpR2 - chr3R 25738714 intron LpR2 - chr3R 25738773 intron LpR2 - chr3R_6_25735001 chr3R_25735001 RAL-320 2559 chr3R 25832677 25832694 chr3R 25841879 25841894 roo 6 9200 8.5 4.5 6.5 0.8 9217 chr3R 25832677 exon alpha4GT2 + chr3R 25837286 intron alpha4GT2 + chr3R 25841894 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-320 2560 chr3R 25832699 25832723 chr3R 25841874 25841900 roo 8 9188 4.5 4.0 4.2 1.5 9201 chr3R 25832699 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841900 exon alpha4GT2 + chr3R_8_25835001 chr3R_25835001 RAL-320 2561 chr3R 25843621 25843659 chr3R 25843770 25843809 13 150 5.0 7.5 6.2 1.8 188 chr3R 25843621 intergenic CR45653 + chr3R 25843715 intergenic CR45653 + chr3R 25843809 intergenic CR45653 + chr3R_13_25840001 chr3R_25840001 RAL-320 2562 chr3R 25847670 25847720 chr3R 25847854 25847857 17 169 4.5 3.0 3.8 3.5 187 chr3R 25847670 intergenic CR45656 -,CR45657 + chr3R 25847764 intergenic CR45656 -,CR45657 + chr3R 25847857 intergenic CR45656 -,CR45657 + chr3R_17_25845001 chr3R_25845001 RAL-320 2563 chr3R 25910917 25910929 chr3R 25911017 25911029 4 100 3.5 3.5 3.5 0.9 112 chr3R 25910917 intron CG42235 + chr3R 25910973 intron CG42235 + chr3R 25911029 intron CG42235 + chr3R_4_25910001 chr3R_25910001 RAL-320 2564 chr3R 25920835 25920881 chr3R 25920936 25920981 9 100 4.5 3.0 3.8 1.9 146 chr3R 25920835 exon CG42235 + chr3R 25920908 3` UTR CG42235 + chr3R 25920981 3` UTR CG42235 + chr3R_9_25920001 chr3R_25920001 RAL-320 2565 chr3R 26064125 26064179 chr3R 26064360 26064426 8 242 2.0 0.0 1.0 4.0 301 chr3R 26064125 intergenic not near genes chr3R 26064276 intergenic not near genes chr3R 26064426 intergenic not near genes chr3R_8_26060001 chr3R_26060001 RAL-320 2566 chr3R 26104069 26104107 chr3R 26105128 26105175 15 1061 33.0 32.5 32.8 0.4 1106 chr3R 26104069 intergenic not near genes chr3R 26104622 intergenic not near genes chr3R 26105175 intergenic not near genes chr3R_15_26100001 chr3R_26100001 RAL-320 2567 chr3R 26106553 26106565 chr3R 26106641 26106666 4 104 3.0 4.5 3.8 0.8 113 chr3R 26106553 intergenic CG31324 + chr3R 26106610 intergenic CG31324 + chr3R 26106666 intergenic CG31324 + chr3R_4_26105001 chr3R_26105001 RAL-320 2568 chr3R 26122445 26122479 chr3R 26122541 26122542 14 88 8.5 2.0 5.2 2.3 97 chr3R 26122445 intron CG31324 + chr3R 26122494 intron CG31324 + chr3R 26122542 intron CG31324 + chr3R_14_26120001 chr3R_26120001 RAL-320 2569 chr3R 26126531 26126570 chr3R 26126637 26126675 10 101 3.5 6.5 5.0 1.7 144 chr3R 26126531 intron CG31324 + chr3R 26126603 intron CG31324 + chr3R 26126675 intron,5` UTR CG31324 +,CG14556 + chr3R_10_26125001 chr3R_26125001 RAL-320 2570 chr3R 26235488 26235506 chr3R 26235575 26235592 5 88 3.0 6.0 4.5 0.9 104 chr3R 26235488 5` UTR CR42745 + chr3R 26235540 5` UTR CR42745 + chr3R 26235592 5` UTR CR42745 + chr3R_5_26235001 chr3R_26235001 RAL-320 2571 chr3R 26235507 26235522 chr3R 26235569 26235586 4 70 2.5 5.5 4.0 0.8 79 chr3R 26235507 5` UTR CR42745 + chr3R 26235546 5` UTR CR42745 + chr3R 26235586 5` UTR CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-320 2572 chr3R 26292091 26292135 chr3R 26292191 26292235 11 98 3.0 6.5 4.8 1.9 144 chr3R 26292091 intergenic not near genes chr3R 26292163 intergenic not near genes chr3R 26292235 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-320 2573 chr3R 26301810 26301859 chr3R 26301911 26301947 24 98 6.0 4.5 5.2 3.9 137 chr3R 26301810 intergenic not near genes chr3R 26301878 intergenic not near genes chr3R 26301947 intergenic not near genes chr3R_24_26300001 chr3R_26300001 RAL-320 2574 chr3R 26302110 26302145 chr3R 26302321 26302372 9 216 5.0 7.5 6.2 1.2 262 chr3R 26302110 intergenic not near genes chr3R 26302241 intergenic not near genes chr3R 26302372 intergenic not near genes chr3R_9_26300001 chr3R_26300001 RAL-320 2575 chr3R 26316696 26316719 chr3R 26316763 26316815 8 73 1.5 3.0 2.2 2.5 119 chr3R 26316696 intergenic not near genes chr3R 26316756 intergenic not near genes chr3R 26316815 intergenic not near genes chr3R_8_26315001 chr3R_26315001 RAL-320 2576 chr3R 26339212 26339256 chr3R 26339321 26339371 15 110 6.5 3.5 5.0 2.5 159 chr3R 26339212 intron CG33970 + chr3R 26339292 intron CG33970 + chr3R 26339371 intron CG33970 + chr3R_15_26335001 chr3R_26335001 RAL-320 2577 chr3R 26349245 26349266 chr3R 26349361 26349382 4 116 5.0 0.0 2.5 1.1 137 chr3R 26349245 intron CG33970 + chr3R 26349314 intron CG33970 + chr3R 26349382 intron CG33970 + chr3R_4_26345001 chr3R_26345001 RAL-320 2578 chr3R 26370322 26370348 chr3R 26370427 26370453 7 105 0.0 7.0 3.5 1.6 131 chr3R 26370322 intergenic not near genes chr3R 26370388 intergenic not near genes chr3R 26370453 intergenic not near genes chr3R_7_26370001 chr3R_26370001 RAL-320 2579 chr3R 26374818 26374855 chr3R 26374940 26374977 13 122 3.5 6.5 5.0 2.2 159 chr3R 26374818 intergenic not near genes chr3R 26374898 intergenic not near genes chr3R 26374977 intergenic not near genes chr3R_13_26370001 chr3R_26370001 RAL-320 2580 chr3R 26376305 26376351 chr3R 26385485 26385507 roo 11 9175 2.5 5.0 3.8 2.3 9202 chr3R 26376305 intergenic not near genes chr3R 26380906 intergenic not near genes chr3R 26385507 intergenic not near genes chr3R_11_26380001 chr3R_26380001 RAL-320 2581 chr3R 26510516 26510528 chr3R 26519585 26519602 roo 5 9072 6.5 6.0 6.2 0.7 9086 chr3R 26510516 intron plum - chr3R 26515059 intron plum - chr3R 26519602 intron,5` UTR plum -,CR45226 + chr3R_5_26515001 chr3R_26515001 RAL-320 2582 chr3R 26510533 26510535 chr3R 26519577 26519603 roo 4 9055 4.5 4.5 4.5 0.7 9070 chr3R 26510533 intron plum - chr3R 26515068 intron plum - chr3R 26519603 intron,5` UTR plum -,CR45226 + chr3R_4_26515001 chr3R_26515001 RAL-320 2583 chr3R 26558310 26558357 chr3R 26565642 26565644 Stalker4 11 7323 5.0 4.5 4.8 1.9 7334 chr3R 26558310 intron scrib + chr3R 26561977 intron scrib + chr3R 26565644 intron scrib + chr3R_11_26560001 chr3R_26560001 RAL-320 2584 chr3R 26611327 26611372 chr3R 26611423 26611428 6 74 2.5 3.5 3.0 1.5 101 chr3R 26611327 intergenic not near genes chr3R 26611378 intergenic not near genes chr3R 26611428 intergenic not near genes chr3R_6_26610001 chr3R_26610001 RAL-320 2585 chr3R 26616026 26616075 chr3R 26616159 26616192 13 129 4.0 5.5 4.8 2.2 166 chr3R 26616026 intergenic not near genes chr3R 26616109 intergenic not near genes chr3R 26616192 intergenic not near genes chr3R_13_26615001 chr3R_26615001 RAL-320 2586 chr3R 26642729 26642757 chr3R 26643143 26643171 jockey 11 413 5.5 8.0 6.8 1.4 442 chr3R 26642729 intergenic not near genes chr3R 26642950 intergenic not near genes chr3R 26643171 intergenic not near genes chr3R_11_26640001 chr3R_26640001 RAL-320 2587 chr3R 26656642 26656648 chr3R 26656757 26656758 4 115 3.0 1.0 2.0 1.3 116 chr3R 26656642 intron,exon beat-VII -,Tb + chr3R 26656700 intron,exon beat-VII -,Tb + chr3R 26656758 intron,exon beat-VII -,Tb + chr3R_4_26655001 chr3R_26655001 RAL-320 2588 chr3R 26656649 26656652 chr3R 26656726 26656769 4 105 2.5 1.0 1.8 1.4 120 chr3R 26656649 intron,exon beat-VII -,Tb + chr3R 26656709 intron,exon beat-VII -,Tb + chr3R 26656769 intron,exon beat-VII -,Tb + chr3R_4_26655001 chr3R_26655001 RAL-320 2589 chr3R 26685842 26685886 chr3R 26686037 26686051 19 184 2.5 4.0 3.2 4.5 209 chr3R 26685842 intergenic not near genes chr3R 26685946 intergenic not near genes chr3R 26686051 intergenic not near genes chr3R_19_26685001 chr3R_26685001 RAL-320 2590 chr3R 26691375 26691410 chr3R 26691463 26691502 7 86 6.0 6.5 6.2 1.0 127 chr3R 26691375 intergenic not near genes chr3R 26691438 intergenic not near genes chr3R 26691502 intergenic not near genes chr3R_7_26690001 chr3R_26690001 RAL-320 2591 chr3R 26713839 26713893 chr3R 26713943 26713969 19 92 1.0 1.5 1.2 8.6 130 chr3R 26713839 5` UTR amon - chr3R 26713904 5` UTR amon - chr3R 26713969 5` UTR amon - chr3R_19_26710001 chr3R_26710001 RAL-320 2592 chr3R 26770222 26770272 chr3R 26770319 26770369 21 97 2.5 5.5 4.0 4.2 147 chr3R 26770222 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770369 intergenic not near genes chr3R_21_26770001 chr3R_26770001 RAL-320 2593 chr3R 26810535 26810584 chr3R 26811040 26811074 roo 16 499 6.0 3.5 4.8 2.8 539 chr3R 26810535 intron Tl + chr3R 26810804 intron Tl + chr3R 26811074 intron Tl + chr3R_16_26810001 chr3R_26810001 RAL-320 2594 chr3R 26898617 26898640 chr3R 26899011 26899034 11 393 6.0 5.0 5.5 1.7 417 chr3R 26898617 intron T48 + chr3R 26898826 intron T48 + chr3R 26899034 intron T48 + chr3R_11_26895001 chr3R_26895001 RAL-320 2595 chr3R 26917273 26917325 chr3R 26917376 26917436 8 102 3.5 0.0 1.8 2.9 163 chr3R 26917273 intron sda + chr3R 26917354 intron sda + chr3R 26917436 intron sda + chr3R_8_26915001 chr3R_26915001 RAL-320 2596 chr3R 27007392 27007430 chr3R 27016546 27016585 roo 18 9154 8.5 6.0 7.2 2.2 9193 chr3R 27007392 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016585 intron RYa-R + chr3R_18_27010001 chr3R_27010001 RAL-320 2597 chr3R 27027662 27027700 chr3R 27027766 27027802 11 101 6.5 2.5 4.5 2.0 140 chr3R 27027662 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027802 intron RYa-R + chr3R_11_27025001 chr3R_27025001 RAL-320 2598 chr3R 27091547 27091568 chr3R 27091646 27091650 8 97 8.0 0.0 4.0 1.6 103 chr3R 27091547 intergenic Cpr97Eb - chr3R 27091598 intergenic Cpr97Eb - chr3R 27091650 intergenic not near genes chr3R_8_27090001 chr3R_27090001 RAL-320 2599 chr3R 27140498 27140522 chr3R 27148128 27148152 412 7 7630 13.0 6.0 9.5 0.7 7654 chr3R 27140498 intron CG6051 - chr3R 27144325 intron CG6051 - chr3R 27148152 intron CG6051 - chr3R_7_27140001 chr3R_27140001 RAL-320 2600 chr3R 27140525 27140542 chr3R 27148125 27148152 412 9 7613 7.5 5.5 6.5 1.2 7627 chr3R 27140525 intron CG6051 - chr3R 27144338 intron CG6051 - chr3R 27148152 intron CG6051 - chr3R_9_27140001 chr3R_27140001 RAL-320 2601 chr3R 27216833 27216836 chr3R 27216989 27216992 5 156 10.0 5.0 7.5 0.6 159 chr3R 27216833 3` UTR CR34006 - chr3R 27216912 3` UTR CR34006 - chr3R 27216992 3` UTR CR34006 - chr3R_5_27215001 chr3R_27215001 RAL-320 2602 chr3R 27216841 27216877 chr3R 27216982 27217033 7 152 5.5 3.0 4.2 1.3 192 chr3R 27216841 3` UTR CR34006 - chr3R 27216937 3` UTR CR34006 - chr3R 27217033 3` UTR CR34006 - chr3R_7_27215001 chr3R_27215001 RAL-320 2603 chr3R 27272103 27272120 chr3R 27272209 27272226 7 106 9.0 8.0 8.5 0.7 123 chr3R 27272103 5` UTR l(3)mbt - chr3R 27272164 5` UTR l(3)mbt - chr3R 27272226 intron l(3)mbt - chr3R_7_27270001 chr3R_27270001 RAL-320 2604 chr3R 27272121 27272148 chr3R 27272204 27272254 7 102 6.0 6.0 6.0 1.0 133 chr3R 27272121 5` UTR l(3)mbt - chr3R 27272188 5` UTR l(3)mbt - chr3R 27272254 intron l(3)mbt - chr3R_7_27270001 chr3R_27270001 RAL-320 2605 chr3R 27315972 27316013 chr3R 27316068 27316099 13 90 8.5 2.5 5.5 2.0 127 chr3R 27315972 intron CG3339 - chr3R 27316036 intron CG3339 - chr3R 27316099 exon CG3339 - chr3R_13_27315001 chr3R_27315001 RAL-320 2606 chr3R 27329458 27329502 chr3R 27329555 27329599 17 95 4.5 4.5 4.5 3.1 141 chr3R 27329458 intergenic CG3330 - chr3R 27329528 intergenic CG3330 - chr3R 27329599 intergenic CG3330 - chr3R_17_27325001 chr3R_27325001 RAL-320 2607 chr3R 27335927 27335965 chr3R 27336028 27336040 7 97 2.0 0.0 1.0 3.5 113 chr3R 27335927 intergenic not near genes chr3R 27335984 intergenic not near genes chr3R 27336040 intergenic not near genes chr3R_7_27335001 chr3R_27335001 RAL-320 2608 chr3R 27342778 27342790 chr3R 27351379 27351391 Tirant 4 8601 10.0 3.5 6.8 0.5 8613 chr3R 27342778 intron CG42534 + chr3R 27347084 intron CG42534 + chr3R 27351391 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-320 2609 chr3R 27342803 27342821 chr3R 27351374 27351404 Tirant 7 8594 5.0 3.0 4.0 1.4 8601 chr3R 27342803 intron CG42534 + chr3R 27347104 intron CG42534 + chr3R 27351404 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-320 2610 chr3R 27368309 27368326 chr3R 27368632 27368638 4 324 4.0 3.5 3.8 0.8 329 chr3R 27368309 intron,3` UTR CG42534 +,CR43476 - chr3R 27368474 intron,3` UTR CG42534 +,CR43476 - chr3R 27368638 intron,3` UTR CG42534 +,CR43476 - chr3R_4_27365001 chr3R_27365001 RAL-320 2611 chr3R 27377413 27377498 chr3R 27377472 27377606 10 92 0.5 0.5 0.5 6.7 193 chr3R 27377413 3` UTR side - chr3R 27377510 3` UTR side - chr3R 27377606 3` UTR side - chr3R_10_27375001 chr3R_27375001 RAL-320 2612 chr3R 27470867 27470916 chr3R 27471000 27471044 10 131 3.5 5.5 4.5 1.8 177 chr3R 27470867 intergenic not near genes chr3R 27470956 intergenic not near genes chr3R 27471044 intergenic not near genes chr3R_10_27470001 chr3R_27470001 RAL-320 2613 chr3R 27492397 27492406 chr3R 27492485 27492513 5 99 5.5 1.5 3.5 1.1 116 chr3R 27492397 intergenic not near genes chr3R 27492455 intergenic not near genes chr3R 27492513 intergenic not near genes chr3R_5_27490001 chr3R_27490001 RAL-320 2614 chr3R 27496584 27496600 chr3R 27496699 27496725 9 122 9.0 6.5 7.8 1.0 141 chr3R 27496584 intergenic not near genes chr3R 27496654 intergenic not near genes chr3R 27496725 intergenic not near genes chr3R_9_27495001 chr3R_27495001 RAL-320 2615 chr3R 27521136 27521164 chr3R 27530365 27530381 roo 4 9226 4.0 0.5 2.2 1.2 9245 chr3R 27521136 intron CG12885 + chr3R 27525758 intron CG12885 + chr3R 27530381 intron CG12885 + chr3R_4_27525001 chr3R_27525001 RAL-320 2616 chr3R 27574110 27574135 chr3R 27574503 27574513 6 398 4.0 1.5 2.8 1.6 403 chr3R 27574110 intron wdb - chr3R 27574312 intron wdb - chr3R 27574513 intron wdb - chr3R_6_27570001 chr3R_27570001 RAL-320 2617 chr3R 27594723 27594767 chr3R 27594828 27594872 11 103 6.0 2.5 4.2 2.1 149 chr3R 27594723 intron CG5639 - chr3R 27594798 intron CG5639 - chr3R 27594872 intron CG5639 - chr3R_11_27590001 chr3R_27590001 RAL-320 2618 chr3R 27627073 27627120 chr3R 27627195 27627199 8 113 4.5 8.0 6.2 1.1 126 chr3R 27627073 intron Tusp + chr3R 27627136 intron Tusp + chr3R 27627199 intron Tusp + chr3R_8_27625001 chr3R_27625001 RAL-320 2619 chr3R 27660701 27660739 chr3R 27660797 27660835 14 96 1.5 7.0 4.2 2.7 134 chr3R 27660701 intergenic not near genes chr3R 27660768 intergenic not near genes chr3R 27660835 intergenic not near genes chr3R_14_27660001 chr3R_27660001 RAL-320 2620 chr3R 27660743 27660746 chr3R 27660788 27660842 4 72 2.5 6.0 4.2 0.8 99 chr3R 27660743 intergenic not near genes chr3R 27660792 intergenic not near genes chr3R 27660842 intergenic not near genes chr3R_4_27660001 chr3R_27660001 RAL-320 2621 chr3R 27706760 27706805 chr3R 27706856 27706887 12 92 4.0 3.0 3.5 2.7 127 chr3R 27706760 intergenic CG12428 -,CG12877 + chr3R 27706824 intergenic CG12428 -,CG12877 + chr3R 27706887 intergenic CG12428 -,CG12877 + chr3R_12_27705001 chr3R_27705001 RAL-320 2622 chr3R 27779259 27779269 chr3R 27779351 27779362 4 93 4.5 6.5 5.5 0.6 103 chr3R 27779259 exon CG34353 - chr3R 27779310 intron CG34353 - chr3R 27779362 intron CG34353 - chr3R_4_27775001 chr3R_27775001 RAL-320 2623 chr3R 27779273 27779287 chr3R 27779350 27779367 7 88 3.0 6.5 4.8 1.2 94 chr3R 27779273 exon CG34353 - chr3R 27779320 intron CG34353 - chr3R 27779367 intron CG34353 - chr3R_7_27775001 chr3R_27775001 RAL-320 2624 chr3R 27799925 27799963 chr3R 27800018 27800065 15 96 2.0 6.0 4.0 3.0 140 chr3R 27799925 intron CG34353 - chr3R 27799995 intron CG34353 - chr3R 27800065 intron CG34353 - chr3R_15_27795001 chr3R_27795001 RAL-320 2625 chr3R 27826569 27826619 chr3R 27826733 27826783 19 149 1.0 5.5 3.2 4.5 214 chr3R 27826569 intron CG34353 - chr3R 27826676 intron CG34353 - chr3R 27826783 intron CG34353 - chr3R_19_27825001 chr3R_27825001 RAL-320 2626 chr3R 27847608 27847657 chr3R 27847907 27847922 15 287 3.0 2.0 2.5 4.3 314 chr3R 27847608 intron CG34353 - chr3R 27847765 intron CG34353 - chr3R 27847922 intron CG34353 - chr3R_15_27845001 chr3R_27845001 RAL-320 2627 chr3R 27856741 27856777 chr3R 27858244 27858268 hopper2 8 1496 7.0 8.0 7.5 0.9 1527 chr3R 27856741 intron CG34353 - chr3R 27857504 intron CG34353 - chr3R 27858268 intron CG34353 - chr3R_8_27855001 chr3R_27855001 RAL-320 2628 chr3R 27862939 27862987 chr3R 27868259 27868274 Transpac 13 5313 3.5 7.0 5.2 2.1 5335 chr3R 27862939 intron CG34353 - chr3R 27865606 intron CG34353 - chr3R 27868274 intron CG34353 - chr3R_13_27865001 chr3R_27865001 RAL-320 2629 chr3R 27871036 27871086 chr3R 27871157 27871206 16 116 5.5 2.0 3.8 3.3 170 chr3R 27871036 intron CG34353 - chr3R 27871121 intron CG34353 - chr3R 27871206 intron CG34353 - chr3R_16_27870001 chr3R_27870001 RAL-320 2630 chr3R 27875693 27875724 chr3R 27882757 27882799 297 13 7072 8.0 7.0 7.5 1.5 7106 chr3R 27875693 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882799 intron CG34353 - chr3R_13_27875001 chr3R_27875001 RAL-320 2631 chr3R 27891455 27891480 chr3R 27891556 27891558 5 100 2.5 5.0 3.8 1.0 103 chr3R 27891455 intron CG34353 - chr3R 27891506 intron CG34353 - chr3R 27891558 intron CG34353 - chr3R_5_27890001 chr3R_27890001 RAL-320 2632 chr3R 28017957 28017981 chr3R 28018037 28018065 4 96 5.5 5.0 5.2 0.6 108 chr3R 28017957 intergenic not near genes chr3R 28018011 intergenic not near genes chr3R 28018065 intergenic not near genes chr3R_4_28015001 chr3R_28015001 RAL-320 2633 chr3R 28061411 28061435 chr3R 28061482 28061536 10 87 4.5 2.5 3.5 2.2 125 chr3R 28061411 intron CG34362 + chr3R 28061474 intron CG34362 + chr3R 28061536 intron CG34362 + chr3R_10_28060001 chr3R_28060001 RAL-320 2634 chr3R 28068493 28068530 chr3R 28073935 28073952 I-element 12 5448 1.5 1.0 1.2 5.5 5459 chr3R 28068493 intron CG34362 + chr3R 28071222 intron CG34362 + chr3R 28073952 intron CG34362 + chr3R_12_28070001 chr3R_28070001 RAL-320 2635 chr3R 28103314 28103354 chr3R 28103416 28103459 11 108 3.5 0.5 2.0 3.7 145 chr3R 28103314 intergenic not near genes chr3R 28103386 intergenic not near genes chr3R 28103459 intergenic not near genes chr3R_11_28100001 chr3R_28100001 RAL-320 2636 chr3R 28173650 28173700 chr3R 28181100 28181150 mdg1 17 7450 3.0 4.0 3.5 3.8 7500 chr3R 28173650 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181150 intron CG34354 + chr3R_17_28175001 chr3R_28175001 RAL-320 2637 chr3R 28223730 28223781 chr3R 28223840 28223885 22 104 2.0 4.0 3.0 5.5 155 chr3R 28223730 intron CG34354 + chr3R 28223808 intron CG34354 + chr3R 28223885 intron CG34354 + chr3R_22_28220001 chr3R_28220001 RAL-320 2638 chr3R 28253337 28253368 chr3R 28255850 28255898 jockey 19 2519 4.0 5.0 4.5 3.5 2561 chr3R 28253337 intergenic not near genes chr3R 28254618 intergenic not near genes chr3R 28255898 intergenic not near genes chr3R_19_28250001 chr3R_28250001 RAL-320 2639 chr3R 28267284 28267304 chr3R 28267386 28267406 6 101 2.5 4.5 3.5 1.3 122 chr3R 28267284 intergenic not near genes chr3R 28267345 intergenic not near genes chr3R 28267406 intergenic not near genes chr3R_6_28265001 chr3R_28265001 RAL-320 2640 chr3R 28282972 28283019 chr3R 28283621 28283658 16 647 3.0 7.5 5.2 2.6 686 chr3R 28282972 exon CG34436 + chr3R 28283315 exon CG34436 + chr3R 28283658 intergenic CG34437 +,CG34436 + chr3R_16_28280001 chr3R_28280001 RAL-320 2641 chr3R 28302090 28302116 chr3R 28302547 28302578 jockey 11 461 5.5 6.5 6.0 1.6 488 chr3R 28302090 intergenic not near genes chr3R 28302334 intergenic not near genes chr3R 28302578 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-320 2642 chr3R 28331488 28331529 chr3R 28331587 28331628 7 99 2.5 4.5 3.5 1.6 140 chr3R 28331488 intron larp - chr3R 28331558 intron larp - chr3R 28331628 intron larp - chr3R_7_28330001 chr3R_28330001 RAL-320 2643 chr3R 28393677 28393722 chr3R 28393797 28393842 17 119 6.5 2.0 4.2 3.3 165 chr3R 28393677 intergenic not near genes chr3R 28393760 intergenic not near genes chr3R 28393842 intergenic not near genes chr3R_17_28390001 chr3R_28390001 RAL-320 2644 chr3R 28407704 28407741 chr3R 28407793 28407807 10 100 2.5 5.5 4.0 2.0 103 chr3R 28407704 intergenic not near genes chr3R 28407756 intergenic not near genes chr3R 28407807 intergenic not near genes chr3R_10_28405001 chr3R_28405001 RAL-320 2645 chr3R 28420872 28420907 chr3R 28421008 28421043 9 136 4.5 4.0 4.2 1.7 171 chr3R 28420872 intron beat-VI + chr3R 28420958 intron beat-VI + chr3R 28421043 intron beat-VI + chr3R_9_28420001 chr3R_28420001 RAL-320 2646 chr3R 28467221 28467254 chr3R 28467332 28467366 6 111 2.5 4.0 3.2 1.4 145 chr3R 28467221 intron beat-VI + chr3R 28467294 intron beat-VI + chr3R 28467366 intron beat-VI + chr3R_6_28465001 chr3R_28465001 RAL-320 2647 chr3R 28484353 28484395 chr3R 28486250 28486292 58 1902 101.0 135.5 118.2 0.5 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_58_28485001 chr3R_28485001 RAL-320 2648 chr3R 28546946 28546988 chr3R 28547071 28547114 21 123 3.0 5.5 4.2 4.0 168 chr3R 28546946 intergenic not near genes chr3R 28547030 intergenic not near genes chr3R 28547114 intergenic not near genes chr3R_21_28545001 chr3R_28545001 RAL-320 2649 chr3R 28594080 28594130 chr3R 28594178 28594229 14 94 1.5 6.0 3.8 2.9 149 chr3R 28594080 5` UTR CR43440 + chr3R 28594154 5` UTR CR43440 + chr3R 28594229 5` UTR CR43440 + chr3R_14_28590001 chr3R_28590001 RAL-320 2650 chr3R 28616461 28616497 chr3R 28616575 28616611 12 114 0.5 6.5 3.5 2.7 150 chr3R 28616461 intron CG10011 - chr3R 28616536 intron CG10011 - chr3R 28616611 intron CG10011 - chr3R_12_28615001 chr3R_28615001 RAL-320 2651 chr3R 28758270 28758284 chr3R 28763907 28763921 roo 6 5637 8.5 0.0 4.2 1.2 5651 chr3R 28758270 intergenic aqrs - chr3R 28761096 intergenic not near genes chr3R 28763921 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-320 2652 chr3R 28763900 28763915 chr3R 28771331 28771372 Stalker4 4 7454 0.0 2.0 1.0 2.0 7472 chr3R 28763900 intergenic not near genes chr3R 28767636 intergenic not near genes chr3R 28771372 intergenic not near genes chr3R_4_28765001 chr3R_28765001 RAL-320 2653 chr3R 28792866 28792900 chr3R 28797969 28798015 jockey 8 5105 2.5 4.0 3.2 1.9 5149 chr3R 28792866 intergenic not near genes chr3R 28795440 intergenic not near genes chr3R 28798015 intergenic not near genes chr3R_8_28795001 chr3R_28795001 RAL-320 2654 chr3R 21907534 21907535 chr3R 28831799 28831802 10 6924266 22.5 16.5 19.5 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_10_25365001 chr3R_25365001 RAL-320 2655 chr3R 28882896 28882944 chr3R 28883033 28883079 10 133 3.5 1.5 2.5 2.9 183 chr3R 28882896 intron,exon CG33203 -,CG14527 + chr3R 28882988 intron CG33203 - chr3R 28883079 intron CG33203 - chr3R_10_28880001 chr3R_28880001 RAL-320 2656 chr3R 28950237 28950277 chr3R 28950338 28950381 7 101 2.5 3.5 3.0 1.8 144 chr3R 28950237 intron CG14521 - chr3R 28950309 intron CG14521 - chr3R 28950381 intron CG14521 - chr3R_7_28950001 chr3R_28950001 RAL-320 2657 chr3R 28960492 28960540 chr3R 28960597 28960644 12 104 3.5 3.0 3.2 2.9 152 chr3R 28960492 intron CG14521 - chr3R 28960568 intron CG14521 - chr3R 28960644 intron CG14521 - chr3R_12_28960001 chr3R_28960001 RAL-320 2658 chr3R 28968397 28968447 chr3R 28968494 28968544 22 97 5.0 4.0 4.5 4.0 147 chr3R 28968397 intron CG14521 - chr3R 28968470 intron CG14521 - chr3R 28968544 intron CG14521 - chr3R_22_28965001 chr3R_28965001 RAL-320 2659 chr3R 28985051 28985092 chr3R 28985171 28985208 10 118 2.0 5.5 3.8 2.1 157 chr3R 28985051 intergenic not near genes chr3R 28985130 intergenic not near genes chr3R 28985208 intergenic not near genes chr3R_10_28985001 chr3R_28985001 RAL-320 2660 chr3R 28988987 28989019 chr3R 28989086 28989117 10 98 0.0 3.5 1.8 3.6 130 chr3R 28988987 intergenic not near genes chr3R 28989052 intergenic not near genes chr3R 28989117 intergenic not near genes chr3R_10_28985001 chr3R_28985001 RAL-320 2661 chr3R 29070044 29070075 chr3R 29070140 29070176 10 100 4.0 4.0 4.0 2.0 132 chr3R 29070044 intron CG11873 + chr3R 29070110 intron CG11873 + chr3R 29070176 intron CG11873 + chr3R_10_29070001 chr3R_29070001 RAL-320 2662 chr3R 29079383 29079407 chr3R 29080774 29080792 NOF 10 1389 0.5 4.0 2.2 3.1 1409 chr3R 29079383 intron CG11873 + chr3R 29080088 intron CG11873 + chr3R 29080792 intron CG11873 + chr3R_10_29080001 chr3R_29080001 RAL-320 2663 chr3R 29141526 29141551 chr3R 29141625 29141650 9 97 1.0 5.0 3.0 2.2 124 chr3R 29141526 intron CG14516 + chr3R 29141588 intron CG14516 + chr3R 29141650 intron CG14516 + chr3R_9_29140001 chr3R_29140001 RAL-320 2664 chr3R 29203828 29203850 chr3R 29203928 29203950 10 100 8.5 0.0 4.2 1.9 122 chr3R 29203828 5` UTR CG14508 - chr3R 29203889 intron CG14508 - chr3R 29203950 intron CG14508 - chr3R_10_29200001 chr3R_29200001 RAL-320 2665 chr3R 29213038 29213091 chr3R 29213141 29213168 21 99 2.5 3.5 3.0 5.2 130 chr3R 29213038 intergenic not near genes chr3R 29213103 intergenic not near genes chr3R 29213168 intergenic not near genes chr3R_21_29210001 chr3R_29210001 RAL-320 2666 chr3R 29237524 29237531 chr3R 29239412 29239431 5 1891 21.0 16.5 18.8 0.3 1907 chr3R 29237524 exon CG11951 - chr3R 29238478 intron CG11951 - chr3R 29239431 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-320 2667 chr3R 29240297 29240329 chr3R 29240401 29240422 11 102 7.5 0.0 3.8 2.3 125 chr3R 29240297 intron CG31427 - chr3R 29240360 5` UTR CG31427 - chr3R 29240422 intergenic CG31427 -,CG31445 - chr3R_11_29240001 chr3R_29240001 RAL-320 2668 chr3R 29264170 29264201 chr3R 29264292 29264323 9 122 0.5 6.0 3.2 2.1 153 chr3R 29264170 intergenic not near genes chr3R 29264246 intergenic not near genes chr3R 29264323 intergenic not near genes chr3R_9_29260001 chr3R_29260001 RAL-320 2669 chr3R 29351737 29351754 chr3R 29351828 29351828 7 95 3.5 5.0 4.2 1.3 91 chr3R 29351737 intergenic not near genes chr3R 29351782 intergenic not near genes chr3R 29351828 intergenic not near genes chr3R_7_29350001 chr3R_29350001 RAL-320 2670 chr3R 29356030 29356076 chr3R 29356130 29356177 12 100 3.0 5.0 4.0 2.4 147 chr3R 29356030 intergenic CR45547 - chr3R 29356104 intergenic CR45547 - chr3R 29356177 3` UTR CR45547 - chr3R_12_29355001 chr3R_29355001 RAL-320 2671 chr3R 29402973 29403007 chr3R 29403078 29403122 12 113 2.0 5.0 3.5 2.7 149 chr3R 29402973 intron Ptp99A + chr3R 29403048 intron Ptp99A + chr3R 29403122 intron Ptp99A + chr3R_12_29400001 chr3R_29400001 RAL-320 2672 chr3R 29406600 29406608 chr3R 29407906 29407909 jockey 5 1305 10.0 9.0 9.5 0.5 1309 chr3R 29406600 intron Ptp99A + chr3R 29407254 intron Ptp99A + chr3R 29407909 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-320 2673 chr3R 29406613 29406642 chr3R 29407902 29407933 jockey 11 1297 5.0 8.5 6.8 1.4 1320 chr3R 29406613 intron Ptp99A + chr3R 29407273 intron Ptp99A + chr3R 29407933 intron Ptp99A + chr3R_11_29405001 chr3R_29405001 RAL-320 2674 chr3R 29412027 29412049 chr3R 29412091 29412128 5 73 4.0 3.5 3.8 1.0 101 chr3R 29412027 intron Ptp99A + chr3R 29412078 intron Ptp99A + chr3R 29412128 intron Ptp99A + chr3R_5_29410001 chr3R_29410001 RAL-320 2675 chr3R 29429768 29429806 chr3R 29429866 29429888 10 92 2.5 4.0 3.2 2.4 120 chr3R 29429768 intron Ptp99A + chr3R 29429828 intron Ptp99A + chr3R 29429888 intron Ptp99A + chr3R_10_29425001 chr3R_29425001 RAL-320 2676 chr3R 29449345 29449386 chr3R 29449443 29449459 10 92 4.5 7.5 6.0 1.4 114 chr3R 29449345 intron Ptp99A + chr3R 29449402 intron Ptp99A + chr3R 29449459 intron Ptp99A + chr3R_10_29445001 chr3R_29445001 RAL-320 2677 chr3R 29471991 29472037 chr3R 29472103 29472135 14 103 4.5 7.0 5.8 2.1 144 chr3R 29471991 intron Ptp99A + chr3R 29472063 intron Ptp99A + chr3R 29472135 intron Ptp99A + chr3R_14_29470001 chr3R_29470001 RAL-320 2678 chr3R 29505875 29505924 chr3R 29505971 29506021 13 92 6.5 8.0 7.2 1.6 146 chr3R 29505875 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506021 intergenic not near genes chr3R_13_29505001 chr3R_29505001 RAL-320 2679 chr3R 29581536 29581566 chr3R 29581637 29581657 8 100 2.5 11.5 7.0 1.0 121 chr3R 29581536 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581657 intergenic not near genes chr3R_8_29580001 chr3R_29580001 RAL-320 2680 chr3R 29624935 29624989 chr3R 29625031 29625085 17 92 3.0 4.0 3.5 3.8 150 chr3R 29624935 intergenic not near genes chr3R 29625010 intergenic not near genes chr3R 29625085 intergenic not near genes chr3R_17_29625001 chr3R_29625001 RAL-320 2681 chr3R 29655637 29655668 chr3R 29655736 29655767 12 98 8.0 4.0 6.0 1.7 130 chr3R 29655637 intron Dop1R2 - chr3R 29655702 intron Dop1R2 - chr3R 29655767 intron Dop1R2 - chr3R_12_29655001 chr3R_29655001 RAL-320 2682 chr3R 29738292 29738301 chr3R 29739763 29739777 hobo 4 1479 4.0 4.5 4.2 0.8 1485 chr3R 29738292 5` UTR CG1969 + chr3R 29739034 intron CG1969 + chr3R 29739777 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 RAL-320 2683 chr3R 29760340 29760390 chr3R 29761561 29761611 pogo 18 1221 4.5 4.0 4.2 3.5 1271 chr3R 29760340 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761611 intergenic not near genes chr3R_18_29760001 chr3R_29760001 RAL-320 2684 chr3R 29773870 29773905 chr3R 29773970 29774006 6 108 2.0 0.0 1.0 3.0 136 chr3R 29773870 intron kay + chr3R 29773938 intron kay + chr3R 29774006 intron kay + chr3R_6_29770001 chr3R_29770001 RAL-320 2685 chr3R 29881998 29882046 chr3R 29891175 29891223 roo 13 9172 7.5 0.5 4.0 2.6 9225 chr3R 29881998 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891223 intron CG31038 + chr3R_13_29885001 chr3R_29885001 RAL-320 2686 chr3R 30061842 30061855 chr3R 30061940 30061953 4 96 8.0 0.0 4.0 0.8 111 chr3R 30061842 intron sima + chr3R 30061898 intron sima + chr3R 30061953 intron sima + chr3R_4_30060001 chr3R_30060001 RAL-320 2687 chr3R 30075565 30075589 chr3R 30075674 30075698 8 109 3.5 5.5 4.5 1.5 133 chr3R 30075565 intron sima + chr3R 30075632 intron sima + chr3R 30075698 intron sima + chr3R_8_30075001 chr3R_30075001 RAL-320 2688 chr3R 30082975 30083006 chr3R 30083066 30083093 9 90 7.5 4.0 5.8 1.3 118 chr3R 30082975 intron sima + chr3R 30083034 intron sima + chr3R 30083093 intron sima + chr3R_9_30080001 chr3R_30080001 RAL-320 2689 chr3R 30083008 30083022 chr3R 30083063 30083105 4 78 5.0 3.0 4.0 0.8 97 chr3R 30083008 intron sima + chr3R 30083056 intron sima + chr3R 30083105 intron sima + chr3R_4_30080001 chr3R_30080001 RAL-320 2690 chr3R 30084844 30084882 chr3R 30086320 30086359 hobo 14 1478 5.0 5.0 5.0 2.3 1515 chr3R 30084844 intron sima + chr3R 30085602 intron sima + chr3R 30086359 intron sima + chr3R_14_30085001 chr3R_30085001 RAL-320 2691 chr3R 30097468 30097660 chr3R 30097569 30097819 15 140 3.0 4.0 3.5 3.3 351 chr3R 30097468 intron sima + chr3R 30097644 intron sima + chr3R 30097819 intron sima + chr3R_15_30095001 chr3R_30095001 RAL-320 2692 chr3R 30170658 30170679 chr3R 30170783 30170805 7 126 3.5 4.0 3.8 1.5 147 chr3R 30170658 exon CG31028 - chr3R 30170732 intron CG31028 - chr3R 30170805 intron CG31028 - chr3R_7_30170001 chr3R_30170001 RAL-320 2693 chr3R 30238752 30238796 chr3R 30239926 30239979 1360 10 1175 3.5 4.0 3.8 2.1 1227 chr3R 30238752 intergenic not near genes chr3R 30239366 intergenic not near genes chr3R 30239979 intergenic not near genes chr3R_10_30235001 chr3R_30235001 RAL-320 2694 chr3R 30260345 30260396 chr3R 30260441 30260492 14 94 2.5 4.0 3.2 3.3 147 chr3R 30260345 intergenic not near genes chr3R 30260418 intergenic not near genes chr3R 30260492 intergenic not near genes chr3R_14_30260001 chr3R_30260001 RAL-320 2695 chr3R 30262566 30262593 chr3R 30262671 30262685 9 110 0.5 2.0 1.2 4.1 119 chr3R 30262566 intergenic not near genes chr3R 30262626 intergenic not near genes chr3R 30262685 intergenic not near genes chr3R_9_30260001 chr3R_30260001 RAL-320 2696 chr3R 30264454 30264466 chr3R 30264660 30264672 6 206 13.0 0.5 6.8 0.8 218 chr3R 30264454 intergenic not near genes chr3R 30264563 intergenic not near genes chr3R 30264672 intergenic not near genes chr3R_6_30260001 chr3R_30260001 RAL-320 2697 chr3R 30264468 30264495 chr3R 30264659 30264700 5 198 6.0 0.5 3.2 1.2 232 chr3R 30264468 intergenic not near genes chr3R 30264584 intergenic not near genes chr3R 30264700 intergenic not near genes chr3R_5_30260001 chr3R_30260001 RAL-320 2698 chr3R 30267965 30267999 chr3R 30268071 30268105 4 106 2.5 6.5 4.5 0.7 140 chr3R 30267965 intergenic not near genes chr3R 30268035 intergenic not near genes chr3R 30268105 intergenic not near genes chr3R_4_30265001 chr3R_30265001 RAL-320 2699 chr3R 30268430 30268448 chr3R 30268494 30268532 8 82 3.0 2.5 2.8 2.1 102 chr3R 30268430 intergenic not near genes chr3R 30268481 intergenic not near genes chr3R 30268532 intergenic not near genes chr3R_8_30265001 chr3R_30265001 RAL-320 2700 chr3R 30307126 30307142 chr3R 30307211 30307243 4 93 8.5 5.5 7.0 0.5 117 chr3R 30307126 intron hdc + chr3R 30307184 intron hdc + chr3R 30307243 intron hdc + chr3R_4_30305001 chr3R_30305001 RAL-320 2701 chr3R 30317304 30317358 chr3R 30324915 30324939 roo 7 7593 1.0 3.5 2.2 2.2 7635 chr3R 30317304 intron hdc + chr3R 30321122 intron hdc + chr3R 30324939 intron hdc + chr3R_7_30320001 chr3R_30320001 RAL-320 2702 chr3R 30330481 30330510 chr3R 30330571 30330598 7 88 11.5 4.5 8.0 0.8 117 chr3R 30330481 intron hdc + chr3R 30330540 intron hdc + chr3R 30330598 intron hdc + chr3R_7_30330001 chr3R_30330001 RAL-320 2703 chr3R 30335934 30335970 chr3R 30336210 30336247 10 270 8.5 0.0 4.2 1.9 313 chr3R 30335934 intron hdc + chr3R 30336090 intron hdc + chr3R 30336247 intron hdc + chr3R_10_30335001 chr3R_30335001 RAL-320 2704 chr3R 30375519 30375564 chr3R 30383164 30383209 412 6 7645 4.0 6.5 5.2 1.0 7690 chr3R 30375519 intergenic not near genes chr3R 30379364 intergenic not near genes chr3R 30383209 intergenic not near genes chr3R_6_30375001 chr3R_30375001 RAL-320 2705 chr3R 30396198 30396242 chr3R 30404484 30404527 roo 16 8283 5.0 8.0 6.5 2.1 8329 chr3R 30396198 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404527 5` UTR CR45570 + chr3R_16_30400001 chr3R_30400001 RAL-320 2706 chr3R 30445492 30445537 chr3R 30445604 30445648 19 111 1.5 4.5 3.0 4.8 156 chr3R 30445492 intergenic aralar1 -,Osi23 - chr3R 30445570 intergenic aralar1 - chr3R 30445648 3` UTR aralar1 - chr3R_19_30445001 chr3R_30445001 RAL-320 2707 chr3R 30448095 30448138 chr3R 30448193 30448224 9 92 3.5 0.0 1.8 3.2 129 chr3R 30448095 intron aralar1 - chr3R 30448160 intron aralar1 - chr3R 30448224 intron aralar1 - chr3R_9_30445001 chr3R_30445001 RAL-320 2708 chr3R 30456371 30456421 chr3R 30456471 30456510 15 96 5.5 5.0 5.2 2.4 139 chr3R 30456371 intergenic CG2224 - chr3R 30456440 3` UTR CG2224 - chr3R 30456510 3` UTR CG2224 - chr3R_15_30455001 chr3R_30455001 RAL-320 2709 chr3R 30480465 30480488 chr3R 30482953 30482968 jockey 8 2482 5.5 9.0 7.2 1.0 2503 chr3R 30480465 intron PH4alphaEFB + chr3R 30481716 intron PH4alphaEFB + chr3R 30482968 intron PH4alphaEFB + chr3R_8_30480001 chr3R_30480001 RAL-320 2710 chr3R 30480492 30480503 chr3R 30482945 30482991 jockey 6 2469 3.5 6.5 5.0 1.0 2499 chr3R 30480492 intron PH4alphaEFB + chr3R 30481742 intron PH4alphaEFB + chr3R 30482991 intron PH4alphaEFB + chr3R_6_30480001 chr3R_30480001 RAL-320 2711 chr3R 30548993 30549018 chr3R 30549105 30549130 13 111 6.0 7.0 6.5 1.7 137 chr3R 30548993 intron tmod + chr3R 30549062 intron tmod + chr3R 30549130 intron tmod + chr3R_13_30545001 chr3R_30545001 RAL-320 2712 chr3R 30549023 30549037 chr3R 30549101 30549149 8 100 4.0 6.0 5.0 1.3 126 chr3R 30549023 intron tmod + chr3R 30549086 intron tmod + chr3R 30549149 intron tmod + chr3R_8_30545001 chr3R_30545001 RAL-320 2713 chr3R 30571681 30571712 chr3R 30571781 30571810 16 99 0.5 4.0 2.2 5.0 129 chr3R 30571681 intron tmod + chr3R 30571746 intron tmod + chr3R 30571810 exon tmod + chr3R_16_30570001 chr3R_30570001 RAL-320 2714 chr3R 30679521 30679548 chr3R 30687009 30687013 blood 6 7476 2.0 9.0 5.5 0.9 7492 chr3R 30679521 intergenic not near genes chr3R 30683267 intergenic not near genes chr3R 30687013 intergenic not near genes chr3R_6_30680001 chr3R_30680001 RAL-320 2715 chr3R 30690141 30690192 chr3R 30690245 30690254 16 93 3.0 3.0 3.0 4.0 113 chr3R 30690141 intergenic Spn100A + chr3R 30690198 intergenic Spn100A + chr3R 30690254 intergenic Spn100A + chr3R_16_30690001 chr3R_30690001 RAL-320 2716 chr3R 30812721 30812748 chr3R 30812829 30812856 5 108 1.5 9.0 5.2 0.8 135 chr3R 30812721 intron cindr + chr3R 30812788 intron cindr + chr3R 30812856 intron cindr + chr3R_5_30810001 chr3R_30810001 RAL-320 2717 chr3R 30818796 30818840 chr3R 30820381 30820425 1360 21 1583 8.0 6.5 7.2 2.6 1629 chr3R 30818796 intron cindr + chr3R 30819610 intron cindr + chr3R 30820425 intron cindr + chr3R_21_30815001 chr3R_30815001 RAL-320 2718 chr3R 30823390 30823416 chr3R 30823506 30823532 9 115 1.5 0.5 1.0 4.5 142 chr3R 30823390 intron cindr + chr3R 30823461 intron cindr + chr3R 30823532 intron cindr + chr3R_9_30820001 chr3R_30820001 RAL-320 2719 chr3R 30859340 30859367 chr3R 30859674 30859696 6 330 1.5 2.5 2.0 2.0 356 chr3R 30859340 intergenic not near genes chr3R 30859518 intergenic not near genes chr3R 30859696 intergenic not near genes chr3R_6_30855001 chr3R_30855001 RAL-320 2720 chr3R 30995022 30995071 chr3R 30995126 30995130 9 89 5.5 0.0 2.8 2.4 108 chr3R 30995022 intron 5-HT7 - chr3R 30995076 intron 5-HT7 - chr3R 30995130 intron 5-HT7 - chr3R_9_30995001 chr3R_30995001 RAL-320 2721 chr3R 31042093 31042142 chr3R 31042198 31042249 12 104 2.0 8.5 5.2 1.9 156 chr3R 31042093 intron CanA1 + chr3R 31042171 intron CanA1 + chr3R 31042249 intron CanA1 + chr3R_12_31040001 chr3R_31040001 RAL-320 2722 chr3R 31074220 31074259 chr3R 31081832 31081877 springer 16 7616 4.5 5.0 4.8 2.8 7657 chr3R 31074220 intron Sox100B + chr3R 31078048 intron Sox100B + chr3R 31081877 intron Sox100B + chr3R_16_31075001 chr3R_31075001 RAL-320 2723 chr3R 31084902 31084931 chr3R 31084991 31085027 10 93 4.0 7.5 5.8 1.5 125 chr3R 31084902 intergenic not near genes chr3R 31084964 intergenic not near genes chr3R 31085027 intergenic not near genes chr3R_10_31080001 chr3R_31080001 RAL-320 2724 chr3R 31224132 31224186 chr3R 31224237 31224280 18 96 4.0 4.0 4.0 3.6 148 chr3R 31224132 intron CG12054 + chr3R 31224206 intron CG12054 + chr3R 31224280 intron CG12054 + chr3R_18_31220001 chr3R_31220001 RAL-320 2725 chr3R 31279376 31279391 chr3R 31285587 31285602 diver 9 6210 9.0 1.5 5.2 1.5 6226 chr3R 31279376 intergenic not near genes chr3R 31282489 intergenic not near genes chr3R 31285602 intergenic not near genes chr3R_9_31280001 chr3R_31280001 RAL-320 2726 chr3R 31295360 31295379 chr3R 31295446 31295485 9 101 5.0 5.0 5.0 1.5 125 chr3R 31295360 intergenic not near genes chr3R 31295422 intergenic not near genes chr3R 31295485 intergenic not near genes chr3R_9_31295001 chr3R_31295001 RAL-320 2727 chr3R 31380954 31380977 chr3R 31381161 31381184 6 205 7.0 6.0 6.5 0.8 230 chr3R 31380954 intergenic not near genes chr3R 31381069 intergenic not near genes chr3R 31381184 intergenic not near genes chr3R_6_31380001 chr3R_31380001 RAL-320 2728 chr3R 31380978 31380990 chr3R 31381150 31381197 10 202 6.0 5.0 5.5 1.5 219 chr3R 31380978 intergenic not near genes chr3R 31381088 intergenic not near genes chr3R 31381197 intergenic not near genes chr3R_10_31380001 chr3R_31380001 RAL-320 2729 chr3R 31413089 31413123 chr3R 31418289 31418321 copia 14 5208 3.0 6.0 4.5 2.5 5232 chr3R 31413089 intron Gprk2 + chr3R 31415705 intron Gprk2 + chr3R 31418321 intron Gprk2 + chr3R_14_31415001 chr3R_31415001 RAL-320 2730 chr3R 31426871 31426911 chr3R 31426983 31427023 9 109 5.5 7.5 6.5 1.2 152 chr3R 31426871 intron Gprk2 + chr3R 31426947 intron Gprk2 + chr3R 31427023 intron Gprk2 + chr3R_9_31425001 chr3R_31425001 RAL-320 2731 chr3R 31431089 31431134 chr3R 31431195 31431236 17 99 5.5 5.0 5.2 2.7 147 chr3R 31431089 intron Gprk2 + chr3R 31431162 intron Gprk2 + chr3R 31431236 intron Gprk2 + chr3R_17_31430001 chr3R_31430001 RAL-320 2732 chr3R 31435341 31435385 chr3R 31435513 31435557 17 168 4.0 2.5 3.2 4.0 216 chr3R 31435341 intron Gprk2 + chr3R 31435449 intron Gprk2 + chr3R 31435557 intron Gprk2 + chr3R_17_31435001 chr3R_31435001 RAL-320 2733 chr3R 31477347 31477387 chr3R 31477535 31477575 13 182 4.0 4.5 4.2 2.5 228 chr3R 31477347 intergenic not near genes chr3R 31477461 intergenic not near genes chr3R 31477575 intergenic not near genes chr3R_13_31475001 chr3R_31475001 RAL-320 2734 chr3R 31603078 31603117 chr3R 31603184 31603196 14 104 5.5 6.5 6.0 2.0 118 chr3R 31603078 intron CycG - chr3R 31603137 intron CycG - chr3R 31603196 intron CycG - chr3R_14_31600001 chr3R_31600001 RAL-320 2735 chr3R 31691510 31691561 chr3R 31696296 31696347 Doc 20 4778 6.5 6.0 6.2 2.8 4837 chr3R 31691510 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_20_31690001 chr3R_31690001 RAL-320 2736 chr3R 31774853 31774895 chr3R 31775015 31775060 12 162 5.0 4.0 4.5 2.2 207 chr3R 31774853 3` UTR sip3 + chr3R 31774956 3` UTR sip3 + chr3R 31775060 3` UTR,3` UTR sip3 +,CG2126 - chr3R_12_31770001 chr3R_31770001 RAL-320 2737 chr3R 31828835 31828878 chr3R 31828944 31828981 12 103 3.0 6.0 4.5 2.2 146 chr3R 31828835 intron RhoGAP100F + chr3R 31828908 intron RhoGAP100F + chr3R 31828981 intron RhoGAP100F + chr3R_12_31825001 chr3R_31825001 RAL-320 2738 chr3R 31829281 31829332 chr3R 31829873 31829914 22 589 4.0 5.5 4.8 3.8 633 chr3R 31829281 intron RhoGAP100F + chr3R 31829598 intron RhoGAP100F + chr3R 31829914 intron RhoGAP100F + chr3R_22_31825001 chr3R_31825001 RAL-320 2739 chr3R 31858127 31858153 chr3R 31858222 31858246 6 97 9.5 4.5 7.0 0.8 119 chr3R 31858127 intron heph - chr3R 31858186 intron heph - chr3R 31858246 intron heph - chr3R_6_31855001 chr3R_31855001 RAL-320 2740 chr3R 31858157 31858174 chr3R 31858219 31858272 4 87 5.0 4.0 4.5 0.7 115 chr3R 31858157 intron heph - chr3R 31858214 intron heph - chr3R 31858272 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-320 2741 chr3R 31858768 31858784 chr3R 31858832 31858890 5 88 6.0 7.0 6.5 0.7 122 chr3R 31858768 intron heph - chr3R 31858829 intron heph - chr3R 31858890 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-320 2742 chr3R 31885655 31885701 chr3R 31885752 31885798 15 96 7.0 5.0 6.0 2.1 143 chr3R 31885655 intron heph - chr3R 31885726 intron heph - chr3R 31885798 intron heph - chr3R_15_31885001 chr3R_31885001 RAL-320 2743 chr3R 31930866 31930904 chr3R 31930986 31931021 6 117 3.5 0.5 2.0 2.0 155 chr3R 31930866 intron heph - chr3R 31930944 intron heph - chr3R 31931021 intron heph - chr3R_6_31930001 chr3R_31930001 RAL-320 2744 chr3R 31931174 31931202 chr3R 31931277 31931305 9 101 6.5 2.5 4.5 1.6 131 chr3R 31931174 intron heph - chr3R 31931240 intron heph - chr3R 31931305 intron heph - chr3R_9_31930001 chr3R_31930001 RAL-320 2745 chr3R 31997980 31998018 chr3R 32005463 32005508 blood 8 7488 6.0 6.5 6.2 1.1 7528 chr3R 31997980 intron heph - chr3R 32001744 intron heph - chr3R 32005508 intron heph - chr3R_8_32000001 chr3R_32000001 RAL-320 2746 chr4 257389 257437 chr4 257574 257624 14 188 1.5 7.5 4.5 2.5 235 chr4 257389 exon RhoGAP102A + chr4 257506 intron RhoGAP102A + chr4 257624 intron RhoGAP102A + chr4_14_255001 chr4_255001 RAL-320 2747 chr4 314495 314530 chr4 314593 314628 12 98 1.0 2.5 1.8 4.3 133 chr4 314495 intergenic Zip102B -,CG32850 + chr4 314562 intergenic CG32850 +,Zip102B - chr4 314628 intergenic CG32850 + chr4_12_310001 chr4_310001 RAL-320 2748 chr4 319970 320008 chr4 328166 328204 Stalker2 13 8195 5.5 4.5 5.0 2.2 8234 chr4 319970 3` UTR CG32850 + chr4 324087 intron CG32850 + chr4 328204 3` UTR,3` UTR CG32850 +,PMCA - chr4_13_320001 chr4_320001 RAL-320 2749 chr4 368684 368702 chr4 368836 368854 7 151 6.0 2.5 4.2 1.3 170 chr4 368684 intron Hcf + chr4 368769 intron Hcf + chr4 368854 intron Hcf + chr4_7_365001 chr4_365001 RAL-320 2750 chr4 662179 662203 chr4 662844 662868 INE-1 4 664 1.5 7.0 4.2 0.8 689 chr4 662179 intron gw - chr4 662524 intron gw - chr4 662868 5` UTR gw - chr4_4_660001 chr4_660001 RAL-320 2751 chr4 671598 671630 chr4 680191 680218 Tirant 6 8595 4.5 8.0 6.2 0.8 8620 chr4 671598 intron CG11360 + chr4 675908 intron CG11360 + chr4 680218 intron CG11360 + chr4_6_675001 chr4_675001 RAL-320 2752 chr4 852880 852928 chr4 853264 853312 12 382 6.0 3.5 4.8 2.1 432 chr4 852880 intergenic not near genes chr4 853096 intergenic not near genes chr4 853312 intergenic CG11148 - chr4_12_850001 chr4_850001 RAL-320 2753 chr4 1081944 1081978 chr4 1082055 1082091 12 110 4.0 8.0 6.0 1.7 147 chr4 1081944 intron Actbeta - chr4 1082018 intron Actbeta - chr4 1082091 intron Actbeta - chr4_12_1080001 chr4_1080001 RAL-320 2754 chrX 295838 295880 chrX 303478 303520 412 10 7635 1.5 3.0 2.2 3.1 7682 chrX 295838 intron CG3777 + chrX 299679 intron CG3777 + chrX 303520 intron CG3777 + chrX_10_295001 chrX_295001 RAL-320 2755 chrX 318458 318487 chrX 323563 323583 flea 13 5104 7.0 9.0 8.0 1.4 5125 chrX 318458 intron,intron CG3777 +,CG32816 - chrX 321020 intron,intron CG3777 +,CG32816 - chrX 323583 intron,intron CG3777 +,CG32816 - chrX_13_320001 chrX_320001 RAL-320 2756 chrX 428421 428432 chrX 434612 434637 3S18 5 6201 9.5 4.0 6.8 0.6 6216 chrX 428421 intron CG32816 - chrX 431529 intron CG32816 - chrX 434637 intron CG32816 - chrX_5_430001 chrX_430001 RAL-320 2757 chrX 428433 428449 chrX 434603 434654 3S18 8 6195 7.5 3.0 5.2 1.3 6221 chrX 428433 intron CG32816 - chrX 431544 intron CG32816 - chrX 434654 intron CG32816 - chrX_8_430001 chrX_430001 RAL-320 2758 chrX 501208 501255 chrX 501310 501357 18 98 3.5 1.5 2.5 5.1 149 chrX 501208 intron svr + chrX 501282 intron svr + chrX 501357 intron svr + chrX_18_500001 chrX_500001 RAL-320 2759 chrX 522168 522210 chrX 522281 522296 16 113 3.5 4.0 3.8 3.3 128 chrX 522168 intron,intron elav -,arg + chrX 522232 intron,intron elav -,arg + chrX 522296 intron,intron elav -,arg + chrX_16_520001 chrX_520001 RAL-320 2760 chrX 551440 551446 chrX 558992 559003 412 4 7556 6.0 9.0 7.5 0.5 7563 chrX 551440 intron Appl + chrX 555222 intron Appl + chrX 559003 intron Appl + chrX_4_555001 chrX_555001 RAL-320 2761 chrX 572515 572551 chrX 572862 572898 12 346 6.0 5.5 5.8 1.8 383 chrX 572515 intron Appl + chrX 572706 intron Appl + chrX 572898 intron Appl + chrX_12_570001 chrX_570001 RAL-320 2762 chrX 806792 806802 chrX 806883 806917 4 105 4.0 4.0 4.0 0.8 125 chrX 806792 intron Sec22 + chrX 806854 intron Sec22 + chrX 806917 intron Sec22 + chrX_4_805001 chrX_805001 RAL-320 2763 chrX 812255 812294 chrX 817898 817943 297 8 5642 8.0 3.5 5.8 1.2 5688 chrX 812255 intron CG43867 - chrX 815099 intron CG43867 - chrX 817943 intron CG43867 - chrX_8_815001 chrX_815001 RAL-320 2764 chrX 827584 827628 chrX 835396 835460 roo 8 7818 4.5 0.0 2.2 2.5 7876 chrX 827584 intron CG43867 - chrX 831522 intron CG43867 - chrX 835460 intron CG43867 - chrX_8_830001 chrX_830001 RAL-320 2765 chrX 868473 868518 chrX 868570 868592 17 85 5.5 5.0 5.2 2.7 119 chrX 868473 intron CG43867 - chrX 868532 intron CG43867 - chrX 868592 intron CG43867 - chrX_17_865001 chrX_865001 RAL-320 2766 chrX 882217 882261 chrX 882324 882368 8 107 3.5 3.5 3.5 1.8 151 chrX 882217 intron CG43867 - chrX 882292 intron CG43867 - chrX 882368 intron CG43867 - chrX_8_880001 chrX_880001 RAL-320 2767 chrX 906710 906725 chrX 908498 908523 S-element 7 1804 5.0 5.5 5.2 1.1 1813 chrX 906710 intron CG43867 - chrX 907616 intron CG43867 - chrX 908523 intron CG43867 - chrX_7_905001 chrX_905001 RAL-320 2768 chrX 957279 957285 chrX 957380 957380 4 100 8.5 1.5 5.0 0.7 101 chrX 957279 intergenic not near genes chrX 957330 intergenic not near genes chrX 957380 intergenic not near genes chrX_4_955001 chrX_955001 RAL-320 2769 chrX 957286 957325 chrX 957379 957404 4 84 4.0 1.0 2.5 1.1 118 chrX 957286 intergenic not near genes chrX 957345 intergenic not near genes chrX 957404 intergenic not near genes chrX_4_955001 chrX_955001 RAL-320 2770 chrX 1054091 1054120 chrX 1055745 1055781 6 1656 0.5 5.0 2.8 1.6 1690 chrX 1054091 intron CR44779 + chrX 1054936 intron CR44779 + chrX 1055781 intron CR44779 + chrX_6_1050001 chrX_1050001 RAL-320 2771 chrX 1063737 1063745 chrX 1072550 1072557 roo 6 8813 10.0 4.5 7.2 0.7 8820 chrX 1063737 intron CR44779 + chrX 1068147 intron CR44779 + chrX 1072557 intron CR44779 + chrX_6_1065001 chrX_1065001 RAL-320 2772 chrX 1357768 1357802 chrX 1367948 1367991 Doc 15 10187 5.5 2.5 4.0 3.0 10223 chrX 1357768 intergenic png - chrX 1362880 intergenic not near genes chrX 1367991 intergenic not near genes chrX_15_1360001 chrX_1360001 RAL-320 2773 chrX 1518024 1518071 chrX 1523446 1523493 jockey 10 5416 1.5 5.5 3.5 2.2 5469 chrX 1518024 intergenic inc + chrX 1520758 intergenic not near genes chrX 1523493 intergenic not near genes chrX_10_1520001 chrX_1520001 RAL-320 2774 chrX 1627964 1627988 chrX 1635441 1635460 gtwin 9 7479 9.5 4.0 6.8 1.2 7496 chrX 1627964 intron,intron Mur2B -,br + chrX 1631712 intron,intron Mur2B -,br + chrX 1635460 intron,intron Mur2B -,br + chrX_9_1630001 chrX_1630001 RAL-320 2775 chrX 1762639 1762656 chrX 1762729 1762761 9 101 1.5 4.0 2.8 2.4 122 chrX 1762639 intergenic not near genes chrX 1762700 intergenic not near genes chrX 1762761 intergenic not near genes chrX_9_1760001 chrX_1760001 RAL-320 2776 chrX 1930533 1930568 chrX 1938109 1938144 opus 7 7580 4.0 4.5 4.2 1.3 7611 chrX 1930533 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938144 3` UTR CG3857 - chrX_7_1930001 chrX_1930001 RAL-320 2777 chrX 2010657 2010692 chrX 2010812 2010840 13 155 3.5 2.0 2.8 3.4 183 chrX 2010657 intergenic mir-2496 +,CR45478 + chrX 2010748 intergenic mir-2496 +,CR45478 + chrX 2010840 intergenic mir-2496 + chrX_13_2010001 chrX_2010001 RAL-320 2778 chrX 2335766 2335789 chrX 2335871 2335894 5 105 4.0 6.5 5.2 0.8 128 chrX 2335766 intron phl + chrX 2335830 intron phl + chrX 2335894 intron phl + chrX_5_2335001 chrX_2335001 RAL-320 2779 chrX 2399848 2399867 chrX 2408193 2408199 roo 8 8346 3.5 5.5 4.5 1.5 8351 chrX 2399848 intergenic not near genes chrX 2404024 intergenic not near genes chrX 2408199 intergenic not near genes chrX_8_2400001 chrX_2400001 RAL-320 2780 chrX 2429650 2429664 chrX 2429751 2429765 6 100 0.0 5.0 2.5 1.7 115 chrX 2429650 intergenic not near genes chrX 2429708 intergenic not near genes chrX 2429765 intergenic not near genes chrX_6_2425001 chrX_2425001 RAL-320 2781 chrX 2578820 2578828 chrX 2578912 2578930 5 98 2.0 3.5 2.8 1.3 110 chrX 2578820 intergenic Pdfr +,Vha36-3 - chrX 2578875 intergenic Vha36-3 -,Pdfr + chrX 2578930 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-320 2782 chrX 2610375 2610392 chrX 2617500 2617509 HMS-Beagle 4 7121 5.5 1.0 3.2 1.0 7134 chrX 2610375 intergenic CG8636 - chrX 2613942 intergenic not near genes chrX 2617509 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-320 2783 chrX 2635357 2635402 chrX 2635486 2635486 19 124 2.5 3.0 2.8 5.0 129 chrX 2635357 intron sgg + chrX 2635422 intron sgg + chrX 2635486 intron sgg + chrX_19_2635001 chrX_2635001 RAL-320 2784 chrX 2723567 2723599 chrX 2724072 2724126 10 517 28.0 39.5 33.8 0.3 559 chrX 2723567 exon fs(1)Yb + chrX 2723846 exon fs(1)Yb + chrX 2724126 3` UTR fs(1)Yb + chrX_10_2720001 chrX_2720001 RAL-320 2785 chrX 2844891 2844930 chrX 2852316 2852343 mdg1 13 7421 2.5 6.0 4.2 2.5 7452 chrX 2844891 intron kirre + chrX 2848617 intron kirre + chrX 2852343 intron kirre + chrX_13_2845001 chrX_2845001 RAL-320 2786 chrX 2888108 2888143 chrX 2888206 2888241 8 94 3.5 5.5 4.5 1.5 133 chrX 2888108 intron kirre + chrX 2888174 intron kirre + chrX 2888241 intron kirre + chrX_8_2885001 chrX_2885001 RAL-320 2787 chrX 2972031 2972054 chrX 2972189 2972214 4 159 2.0 6.0 4.0 0.8 183 chrX 2972031 intron,intron kirre +,rst - chrX 2972122 intron,intron kirre +,rst - chrX 2972214 intron,intron kirre +,rst - chrX_4_2970001 chrX_2970001 RAL-320 2788 chrX 3058010 3058046 chrX 3058271 3058307 pogo 10 260 6.0 5.0 5.5 1.5 297 chrX 3058010 intron kirre + chrX 3058158 intron kirre + chrX 3058307 intron kirre + chrX_10_3055001 chrX_3055001 RAL-320 2789 chrX 3218491 3218539 chrX 3227660 3227708 roo 9 9169 0.0 1.0 0.5 6.0 9217 chrX 3218491 intron dnc + chrX 3223100 intron dnc + chrX 3227708 intron dnc + chrX_9_3220001 chrX_3220001 RAL-320 2790 chrX 3243617 3243660 chrX 3243727 3243746 11 105 2.5 5.5 4.0 2.2 129 chrX 3243617 intron dnc + chrX 3243682 intron dnc + chrX 3243746 intron dnc + chrX_11_3240001 chrX_3240001 RAL-320 2791 chrX 3334317 3334350 chrX 3334396 3334448 16 94 1.0 2.0 1.5 6.4 131 chrX 3334317 exon,intron dnc +,CR44886 - chrX 3334382 intron,intron dnc +,CR44886 - chrX 3334448 intron,intron dnc +,CR44886 - chrX_16_3330001 chrX_3330001 RAL-320 2792 chrX 3414318 3414367 chrX 3414463 3414514 14 144 2.5 2.0 2.2 4.4 196 chrX 3414318 intron,intron CR44999 +,CG12535 - chrX 3414416 intron,intron CR44999 +,CG12535 - chrX 3414514 intron,intron CR44999 +,CG12535 - chrX_14_3410001 chrX_3410001 RAL-320 2793 chrX 3415013 3415049 chrX 3421200 3421254 3S18 8 6203 2.5 4.5 3.5 1.8 6241 chrX 3415013 intron,intron CR44999 +,CG12535 - chrX 3418134 intron,intron CR44999 +,CG12535 - chrX 3421254 intron,intron CR44999 +,CG12535 - chrX_8_3415001 chrX_3415001 RAL-320 2794 chrX 3476323 3476335 chrX 3476425 3476437 5 102 2.5 0.5 1.5 2.0 114 chrX 3476323 intron CR44999 + chrX 3476380 intron CR44999 + chrX 3476437 intron CR44999 + chrX_5_3475001 chrX_3475001 RAL-320 2795 chrX 3481728 3481770 chrX 3481819 3481866 10 94 3.0 6.5 4.8 1.7 138 chrX 3481728 intron,intron CR44999 +,CG10804 - chrX 3481797 intron,intron CR44999 +,CG10804 - chrX 3481866 intron,intron CR44999 +,CG10804 - chrX_10_3480001 chrX_3480001 RAL-320 2796 chrX 3493073 3493124 chrX 3502252 3502300 roo 12 9174 3.5 1.0 2.2 3.8 9227 chrX 3493073 intron,intron CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502300 intron,intron CR44999 +,Gas8 - chrX_12_3495001 chrX_3495001 RAL-320 2797 chrX 3520893 3520944 chrX 3520990 3521038 15 90 3.5 3.0 3.2 3.6 145 chrX 3520893 intron,intron CR44999 +,CG32791 - chrX 3520966 intron,intron CR44999 +,CG32791 - chrX 3521038 intron,intron CR44999 +,CG32791 - chrX_15_3520001 chrX_3520001 RAL-320 2798 chrX 3567271 3567292 chrX 3567376 3567397 4 105 0.0 3.0 1.5 1.6 126 chrX 3567271 intron,intron CG32791 -,ppk8 + chrX 3567334 intron,intron CG32791 -,ppk8 + chrX 3567397 intron,intron CG32791 -,ppk8 + chrX_4_3565001 chrX_3565001 RAL-320 2799 chrX 3597533 3597582 chrX 3619721 3619764 roo 21 22182 3.0 1.0 2.0 7.0 22231 chrX 3597533 intron AstA-R1 + chrX 3608648 intron AstA-R1 + chrX 3619764 intron AstA-R1 + chrX_21_3605001 chrX_3605001 RAL-320 2800 chrX 3662463 3662483 chrX 3662562 3662587 4 100 7.5 10.0 8.8 0.4 124 chrX 3662463 intron AstA-R1 + chrX 3662525 intron AstA-R1 + chrX 3662587 intron AstA-R1 + chrX_4_3660001 chrX_3660001 RAL-320 2801 chrX 3683453 3683492 chrX 3683557 3683575 10 102 3.0 3.5 3.2 2.4 122 chrX 3683453 intron Mnt + chrX 3683514 intron Mnt + chrX 3683575 intron Mnt + chrX_10_3680001 chrX_3680001 RAL-320 2802 chrX 3713086 3713135 chrX 3713214 3713264 5 129 2.0 2.5 2.2 1.6 178 chrX 3713086 intron Rala - chrX 3713175 intron Rala - chrX 3713264 intron Rala - chrX_5_3710001 chrX_3710001 RAL-320 2803 chrX 3842300 3842350 chrX 3842561 3842596 pogo 12 258 3.0 2.5 2.8 3.2 296 chrX 3842300 intron ec + chrX 3842448 intron ec + chrX 3842596 intron ec + chrX_12_3840001 chrX_3840001 RAL-320 2804 chrX 3866084 3866136 chrX 3866182 3866224 12 93 2.0 0.5 1.2 5.5 140 chrX 3866084 intron yin - chrX 3866154 intron yin - chrX 3866224 intron yin - chrX_12_3865001 chrX_3865001 RAL-320 2805 chrX 3986875 3986884 chrX 3994499 3994537 412 4 7643 2.5 0.0 1.2 1.8 7662 chrX 3986875 intergenic not near genes chrX 3990706 intergenic not near genes chrX 3994537 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-320 2806 chrX 4029521 4029559 chrX 4029717 4029738 9 199 3.0 7.0 5.0 1.5 217 chrX 4029521 intergenic not near genes chrX 4029630 intergenic not near genes chrX 4029738 intergenic not near genes chrX_9_4025001 chrX_4025001 RAL-320 2807 chrX 4039066 4039085 chrX 4039161 4039169 6 93 9.5 3.0 6.2 0.8 103 chrX 4039066 intergenic not near genes chrX 4039118 intergenic not near genes chrX 4039169 intergenic not near genes chrX_6_4035001 chrX_4035001 RAL-320 2808 chrX 4132399 4132406 chrX 4132496 4132503 4 97 5.5 9.0 7.2 0.5 104 chrX 4132399 3` UTR GlcAT-I + chrX 4132451 3` UTR GlcAT-I + chrX 4132503 3` UTR GlcAT-I + chrX_4_4130001 chrX_4130001 RAL-320 2809 chrX 4157879 4157921 chrX 4164952 4164968 297 7 7068 2.5 2.5 2.5 2.0 7089 chrX 4157879 intron Fas2 - chrX 4161424 intron Fas2 - chrX 4164968 intron Fas2 - chrX_7_4160001 chrX_4160001 RAL-320 2810 chrX 4173844 4173865 chrX 4173935 4173953 4 95 3.5 1.5 2.5 1.1 109 chrX 4173844 intron Fas2 - chrX 4173898 intron Fas2 - chrX 4173953 intron Fas2 - chrX_4_4170001 chrX_4170001 RAL-320 2811 chrX 4209907 4209956 chrX 4210017 4210066 5 107 0.0 2.5 1.2 2.3 159 chrX 4209907 intergenic not near genes chrX 4209986 intergenic not near genes chrX 4210066 intergenic not near genes chrX_5_4205001 chrX_4205001 RAL-320 2812 chrX 4299519 4299536 chrX 4299970 4299998 4 468 1.0 4.5 2.8 1.1 479 chrX 4299519 intergenic not near genes chrX 4299758 intergenic CG12692 - chrX 4299998 intergenic CG12692 - chrX_4_4295001 chrX_4295001 RAL-320 2813 chrX 4343862 4343892 chrX 4343997 4344025 6 133 3.5 4.5 4.0 1.2 163 chrX 4343862 intron norpA + chrX 4343944 intron norpA + chrX 4344025 intron norpA + chrX_6_4340001 chrX_4340001 RAL-320 2814 chrX 4525735 4525771 chrX 4525847 4525883 11 109 1.0 2.5 1.8 3.9 148 chrX 4525735 intron CR32773 - chrX 4525809 intron CR32773 - chrX 4525883 intron CR32773 - chrX_11_4525001 chrX_4525001 RAL-320 2815 chrX 4660800 4660826 chrX 4660919 4660945 4 119 7.0 0.0 3.5 0.9 145 chrX 4660800 intron CG3009 - chrX 4660872 intron CG3009 - chrX 4660945 intron CG3009 - chrX_4_4660001 chrX_4660001 RAL-320 2816 chrX 4700376 4700384 chrX 4700738 4700747 jockey 6 361 11.0 9.5 10.2 0.5 371 chrX 4700376 3` UTR ctp + chrX 4700562 3` UTR ctp + chrX 4700747 3` UTR ctp + chrX_6_4700001 chrX_4700001 RAL-320 2817 chrX 4700386 4700426 chrX 4700735 4700749 jockey 10 349 3.5 9.5 6.5 1.3 363 chrX 4700386 3` UTR ctp + chrX 4700568 3` UTR ctp + chrX 4700749 3` UTR ctp + chrX_10_4700001 chrX_4700001 RAL-320 2818 chrX 4731796 4731834 chrX 4736909 4736917 jockey 10 5103 4.5 5.0 4.8 1.7 5121 chrX 4731796 intergenic not near genes chrX 4734356 intergenic not near genes chrX 4736917 intergenic not near genes chrX_10_4730001 chrX_4730001 RAL-320 2819 chrX 4744136 4744170 chrX 4744254 4744288 10 118 1.5 2.0 1.8 3.6 152 chrX 4744136 intergenic not near genes chrX 4744212 intergenic not near genes chrX 4744288 intergenic not near genes chrX_10_4740001 chrX_4740001 RAL-320 2820 chrX 4763245 4763276 chrX 4763753 4763784 Stalker4 7 506 3.5 4.5 4.0 1.4 539 chrX 4763245 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763784 intergenic not near genes chrX_7_4760001 chrX_4760001 RAL-320 2821 chrX 4792360 4792403 chrX 4792813 4792813 jockey 13 445 4.5 6.5 5.5 2.0 453 chrX 4792360 intergenic not near genes chrX 4792586 intergenic not near genes chrX 4792813 intergenic not near genes chrX_13_4790001 chrX_4790001 RAL-320 2822 chrX 4827952 4827966 chrX 4835340 4835347 Stalker4 5 7388 7.0 2.5 4.8 0.9 7395 chrX 4827952 intergenic not near genes chrX 4831650 intergenic not near genes chrX 4835347 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-320 2823 chrX 4827977 4827990 chrX 4835338 4835381 Stalker4 5 7366 5.5 2.5 4.0 1.0 7404 chrX 4827977 intergenic not near genes chrX 4831679 intergenic not near genes chrX 4835381 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-320 2824 chrX 4852746 4852761 chrX 4852987 4853002 4 240 11.5 3.5 7.5 0.5 256 chrX 4852746 intron CG42594 + chrX 4852874 intron CG42594 + chrX 4853002 intron CG42594 + chrX_4_4850001 chrX_4850001 RAL-320 2825 chrX 4852767 4852795 chrX 4852985 4853036 11 233 4.0 3.5 3.8 2.3 269 chrX 4852767 intron CG42594 + chrX 4852902 intron CG42594 + chrX 4853036 intron CG42594 + chrX_11_4850001 chrX_4850001 RAL-320 2826 chrX 4856129 4856148 chrX 4856222 4856233 4 92 5.5 1.5 3.5 0.9 104 chrX 4856129 intron CG42594 + chrX 4856181 intron CG42594 + chrX 4856233 intron CG42594 + chrX_4_4855001 chrX_4855001 RAL-320 2827 chrX 4931327 4931376 chrX 4931441 4931490 10 112 28.5 23.0 25.8 0.4 163 chrX 4931327 intron CG44774 - chrX 4931408 intron CG44774 - chrX 4931490 intron CG44774 - chrX_10_4930001 chrX_4930001 RAL-320 2828 chrX 4990021 4990069 chrX 4997255 4997303 roo 10 7231 4.0 1.0 2.5 2.9 7282 chrX 4990021 intron CR44833 - chrX 4993662 intron CR44833 - chrX 4997303 intron CR44833 - chrX_10_4990001 chrX_4990001 RAL-320 2829 chrX 5096257 5096304 chrX 5103842 5103889 springer 12 7584 3.0 2.5 2.8 3.2 7632 chrX 5096257 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103889 intron,intron CG15465 +,rg + chrX_12_5100001 chrX_5100001 RAL-320 2830 chrX 5131379 5131431 chrX 5131479 5131487 10 83 4.5 2.5 3.5 2.2 108 chrX 5131379 intron,intron CG15465 +,rg + chrX 5131433 intron,intron CG15465 +,rg + chrX 5131487 intron,intron CG15465 +,rg + chrX_10_5130001 chrX_5130001 RAL-320 2831 chrX 5134791 5134798 chrX 5134912 5134919 4 121 7.0 5.0 6.0 0.6 128 chrX 5134791 intron,intron CG15465 +,rg + chrX 5134855 intron,intron CG15465 +,rg + chrX 5134919 intron,intron CG15465 +,rg + chrX_4_5130001 chrX_5130001 RAL-320 2832 chrX 5134800 5134824 chrX 5134911 5134940 9 118 5.0 5.0 5.0 1.5 140 chrX 5134800 intron,intron CG15465 +,rg + chrX 5134870 intron,intron CG15465 +,rg + chrX 5134940 intron,intron CG15465 +,rg + chrX_9_5130001 chrX_5130001 RAL-320 2833 chrX 5137068 5137097 chrX 5137221 5137226 8 150 3.5 3.0 3.2 1.9 158 chrX 5137068 intron,intron CG15465 +,rg + chrX 5137147 intron,intron CG15465 +,rg + chrX 5137226 intron,intron CG15465 +,rg + chrX_8_5135001 chrX_5135001 RAL-320 2834 chrX 5147857 5147885 chrX 5147960 5148002 9 112 4.0 0.5 2.2 2.8 145 chrX 5147857 intron,intron CG15465 +,rg + chrX 5147930 intron,intron CG15465 +,rg + chrX 5148002 intron,intron CG15465 +,rg + chrX_9_5145001 chrX_5145001 RAL-320 2835 chrX 5269940 5269966 chrX 5270042 5270078 7 105 2.0 2.5 2.2 2.2 138 chrX 5269940 intergenic not near genes chrX 5270009 intergenic not near genes chrX 5270078 intergenic not near genes chrX_7_5270001 chrX_5270001 RAL-320 2836 chrX 5291496 5291503 chrX 5291592 5291606 4 100 10.0 3.0 6.5 0.5 110 chrX 5291496 intergenic not near genes chrX 5291551 intergenic not near genes chrX 5291606 intergenic not near genes chrX_4_5290001 chrX_5290001 RAL-320 2837 chrX 5366288 5366333 chrX 5366436 5366481 13 145 2.0 5.0 3.5 2.9 193 chrX 5366288 intron SK + chrX 5366384 intron SK + chrX 5366481 intron SK + chrX_13_5365001 chrX_5365001 RAL-320 2838 chrX 5374062 5374114 chrX 5374174 5374226 15 108 2.0 3.5 2.8 3.9 164 chrX 5374062 intron SK + chrX 5374144 intron SK + chrX 5374226 intron SK + chrX_15_5370001 chrX_5370001 RAL-320 2839 chrX 5456568 5456612 chrX 5456704 5456748 9 135 4.0 2.5 3.2 2.1 180 chrX 5456568 intron SPR + chrX 5456658 intron SPR + chrX 5456748 intron SPR + chrX_9_5455001 chrX_5455001 RAL-320 2840 chrX 5524820 5524859 chrX 5528703 5528722 412 8 3880 4.5 2.5 3.5 1.8 3902 chrX 5524820 intergenic snoRNA:Psi28S-3342 - chrX 5526771 intergenic not near genes chrX 5528722 intergenic Vsx2 - chrX_8_5525001 chrX_5525001 RAL-320 2841 chrX 5555381 5555394 chrX 5555495 5555504 6 125 3.0 4.0 3.5 1.3 123 chrX 5555381 intron Vsx2 - chrX 5555442 intron Vsx2 - chrX 5555504 intron Vsx2 - chrX_6_5555001 chrX_5555001 RAL-320 2842 chrX 5599762 5599803 chrX 5599983 5600023 7 212 3.0 5.0 4.0 1.4 261 chrX 5599762 intron Vsx1 + chrX 5599892 intron Vsx1 + chrX 5600023 intron Vsx1 + chrX_7_5595001 chrX_5595001 RAL-320 2843 chrX 5727403 5727415 chrX 5732162 5732173 Doc 4 4759 2.5 0.5 1.5 1.6 4770 chrX 5727403 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732173 intron CG32758 - chrX_4_5725001 chrX_5725001 RAL-320 2844 chrX 5883794 5883826 chrX 5884050 5884065 pogo 6 255 5.5 2.5 4.0 1.2 271 chrX 5883794 intron CR45668 - chrX 5883930 intron CR45668 - chrX 5884065 intron CR45668 - chrX_6_5880001 chrX_5880001 RAL-320 2845 chrX 5884145 5884191 chrX 5884406 5884452 pogo 11 256 4.0 5.0 4.5 2.0 307 chrX 5884145 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884452 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-320 2846 chrX 6003270 6003311 chrX 6003369 6003412 10 101 0.0 4.5 2.2 3.1 142 chrX 6003270 intron CR44498 + chrX 6003341 intron CR44498 + chrX 6003412 intron CR44498 + chrX_10_6000001 chrX_6000001 RAL-320 2847 chrX 6093292 6093331 chrX 6093391 6093430 10 94 3.0 4.0 3.5 2.2 138 chrX 6093292 intron Nep1 + chrX 6093361 intron Nep1 + chrX 6093430 intron Nep1 + chrX_10_6090001 chrX_6090001 RAL-320 2848 chrX 6118677 6118733 chrX 6118779 6118835 14 100 4.0 3.5 3.8 2.9 158 chrX 6118677 intron Ca-alpha1T - chrX 6118756 intron Ca-alpha1T - chrX 6118835 intron Ca-alpha1T - chrX_14_6115001 chrX_6115001 RAL-320 2849 chrX 6164279 6164328 chrX 6164385 6164419 14 102 2.0 4.5 3.2 3.3 140 chrX 6164279 intron Ca-alpha1T - chrX 6164349 intron Ca-alpha1T - chrX 6164419 intron Ca-alpha1T - chrX_14_6160001 chrX_6160001 RAL-320 2850 chrX 6171568 6171587 chrX 6179021 6179040 Quasimodo 5 7452 8.5 4.0 6.2 0.7 7472 chrX 6171568 intron Ca-alpha1T - chrX 6175304 intron Ca-alpha1T - chrX 6179040 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-320 2851 chrX 6171589 6171608 chrX 6179017 6179061 Quasimodo 6 7447 7.5 3.5 5.5 0.9 7472 chrX 6171589 intron Ca-alpha1T - chrX 6175325 intron Ca-alpha1T - chrX 6179061 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-320 2852 chrX 6306546 6306580 chrX 6306632 6306677 4 90 6.0 4.0 5.0 0.7 131 chrX 6306546 3` UTR CG3823 + chrX 6306612 3` UTR CG3823 + chrX 6306677 3` UTR CG3823 + chrX_4_6305001 chrX_6305001 RAL-320 2853 chrX 6335237 6335241 chrX 6337733 6337771 Tirant 4 2522 0.5 6.0 3.2 1.0 2534 chrX 6335237 intergenic not near genes chrX 6336504 intergenic not near genes chrX 6337771 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-320 2854 chrX 6392874 6392893 chrX 6397659 6397678 Doc 5 4785 4.0 8.0 6.0 0.7 4804 chrX 6392874 intergenic not near genes chrX 6395276 intergenic not near genes chrX 6397678 intergenic not near genes chrX_5_6395001 chrX_6395001 RAL-320 2855 chrX 6445323 6445332 chrX 6451070 6451110 297 4 5760 2.0 4.5 3.2 1.0 5787 chrX 6445323 intron CG42340 - chrX 6448216 intron CG42340 - chrX 6451110 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-320 2856 chrX 6487963 6487981 chrX 6488065 6488068 8 99 8.0 7.5 7.8 0.9 105 chrX 6487963 intron CG42340 - chrX 6488016 intron CG42340 - chrX 6488068 intron CG42340 - chrX_8_6485001 chrX_6485001 RAL-320 2857 chrX 6591835 6591871 chrX 6591940 6591976 6 105 2.5 0.0 1.2 2.7 141 chrX 6591835 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591976 intron Pat1 + chrX_6_6590001 chrX_6590001 RAL-320 2858 chrX 6605464 6605505 chrX 6608506 6608547 Burdock 15 3041 3.0 8.0 5.5 2.3 3083 chrX 6605464 intron pigs + chrX 6607006 intron pigs + chrX 6608547 intron pigs + chrX_15_6605001 chrX_6605001 RAL-320 2859 chrX 6618447 6618468 chrX 6618542 6618546 6 94 7.0 8.5 7.8 0.7 99 chrX 6618447 intron pigs + chrX 6618496 intron pigs + chrX 6618546 intron pigs + chrX_6_6615001 chrX_6615001 RAL-320 2860 chrX 6678906 6678943 chrX 6679004 6679047 6 95 2.0 2.0 2.0 2.0 141 chrX 6678906 5` UTR,intron CG3192 -,l(1)G0255 + chrX 6678976 5` UTR,intron CG3192 -,l(1)G0255 + chrX 6679047 5` UTR,intron CG3192 -,l(1)G0255 + chrX_6_6675001 chrX_6675001 RAL-320 2861 chrX 6729616 6729644 chrX 6729967 6729992 7 349 8.0 3.0 5.5 1.1 376 chrX 6729616 intron CG3168 - chrX 6729804 intron CG3168 - chrX 6729992 intron CG3168 - chrX_7_6725001 chrX_6725001 RAL-320 2862 chrX 6737504 6737542 chrX 6737605 6737634 14 94 3.0 1.0 2.0 4.7 130 chrX 6737504 intron CG3168 - chrX 6737569 intron CG3168 - chrX 6737634 intron CG3168 - chrX_14_6735001 chrX_6735001 RAL-320 2863 chrX 6814266 6814285 chrX 6814363 6814380 5 97 2.0 1.0 1.5 2.0 114 chrX 6814266 intron iav + chrX 6814323 intron iav + chrX 6814380 intron iav + chrX_5_6810001 chrX_6810001 RAL-320 2864 chrX 6865771 6865793 chrX 6865872 6865894 13 100 9.0 9.0 9.0 1.3 123 chrX 6865771 intron CG14434 - chrX 6865832 intron CG14434 - chrX 6865894 intron CG14434 - chrX_13_6865001 chrX_6865001 RAL-320 2865 chrX 6897590 6897710 chrX 6897672 6897823 12 119 0.0 0.5 0.2 10.0 233 chrX 6897590 intergenic not near genes chrX 6897706 intergenic not near genes chrX 6897823 intergenic not near genes chrX_12_6895001 chrX_6895001 RAL-320 2866 chrX 6989488 6989533 chrX 6989589 6989623 8 100 5.0 6.5 5.8 1.2 135 chrX 6989488 intron ogre - chrX 6989556 intron ogre - chrX 6989623 intron ogre - chrX_8_6985001 chrX_6985001 RAL-320 2867 chrX 7023587 7023630 chrX 7030990 7031038 Tabor 9 7399 3.0 3.5 3.2 2.1 7451 chrX 7023587 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031038 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-320 2868 chrX 7125244 7125268 chrX 7134418 7134447 roo 13 9178 1.5 7.5 4.5 2.4 9203 chrX 7125244 intergenic not near genes chrX 7129846 intergenic not near genes chrX 7134447 intergenic not near genes chrX_13_7125001 chrX_7125001 RAL-320 2869 chrX 7346083 7346102 chrX 7348888 7348904 4 2800 4.5 6.5 5.5 0.6 2821 chrX 7346083 intron,intron CR44357 -,CG1677 - chrX 7347494 intron,intron,5` UTR CR44357 -,CG1677 -,CG15034 - chrX 7348904 intron,intron CR44357 -,CG1677 - chrX_4_7345001 chrX_7345001 RAL-320 2870 chrX 7702887 7702907 chrX 7703346 7703361 jockey 5 458 5.0 7.5 6.2 0.7 474 chrX 7702887 intron CHES-1-like - chrX 7703124 intron CHES-1-like - chrX 7703361 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-320 2871 chrX 7702911 7702929 chrX 7703342 7703373 jockey 10 448 3.5 5.0 4.2 1.9 462 chrX 7702911 intron CHES-1-like - chrX 7703142 intron CHES-1-like - chrX 7703373 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-320 2872 chrX 7720540 7720581 chrX 7720640 7720683 8 97 0.5 6.0 3.2 1.9 143 chrX 7720540 intergenic not near genes chrX 7720612 intergenic not near genes chrX 7720683 intergenic not near genes chrX_8_7720001 chrX_7720001 RAL-320 2873 chrX 7737110 7737135 chrX 7737242 7737267 4 128 3.5 3.0 3.2 1.0 157 chrX 7737110 5` UTR Tom40 + chrX 7737188 intron Tom40 + chrX 7737267 intron Tom40 + chrX_4_7735001 chrX_7735001 RAL-320 2874 chrX 7832415 7832459 chrX 7832524 7832568 10 108 5.5 3.5 4.5 1.8 153 chrX 7832415 intron CG1402 + chrX 7832492 intron CG1402 + chrX 7832568 intron CG1402 + chrX_10_7830001 chrX_7830001 RAL-320 2875 chrX 8035760 8035770 chrX 8039878 8039881 4 4111 26.0 12.0 19.0 0.2 4121 chrX 8035760 3` UTR CG2233 - chrX 8037820 3` UTR fs(1)h - chrX 8039881 3` UTR fs(1)h - chrX_4_8035001 chrX_8035001 RAL-320 2876 chrX 8066572 8066602 chrX 8066664 8066711 6 104 1.0 1.0 1.0 3.0 139 chrX 8066572 intron mys + chrX 8066642 intron mys + chrX 8066711 intron mys + chrX_6_8065001 chrX_8065001 RAL-320 2877 chrX 8092268 8092318 chrX 8092373 8092423 14 105 1.0 2.5 1.8 5.0 155 chrX 8092268 intron Ubc-E2H - chrX 8092346 intron Ubc-E2H - chrX 8092423 intron Ubc-E2H - chrX_14_8090001 chrX_8090001 RAL-320 2878 chrX 8421570 8421583 chrX 8421673 8421686 9 101 11.5 7.0 9.2 0.9 116 chrX 8421570 intron Trf2 + chrX 8421628 intron Trf2 + chrX 8421686 intron Trf2 + chrX_9_8420001 chrX_8420001 RAL-320 2879 chrX 8421584 8421621 chrX 8421669 8421724 12 101 4.0 5.5 4.8 2.1 140 chrX 8421584 intron Trf2 + chrX 8421654 intron Trf2 + chrX 8421724 intron Trf2 + chrX_12_8420001 chrX_8420001 RAL-320 2880 chrX 8536741 8536772 chrX 8536837 8536868 8 95 10.0 7.5 8.8 0.8 127 chrX 8536741 intron Nrg + chrX 8536804 intron Nrg + chrX 8536868 intron Nrg + chrX_8_8535001 chrX_8535001 RAL-320 2881 chrX 8727383 8727425 chrX 8727480 8727522 6 97 1.5 3.5 2.5 1.7 139 chrX 8727383 intergenic not near genes chrX 8727452 intergenic not near genes chrX 8727522 intergenic not near genes chrX_6_8725001 chrX_8725001 RAL-320 2882 chrX 8743252 8743264 chrX 8743350 8743361 4 96 2.0 2.0 2.0 1.3 109 chrX 8743252 intergenic not near genes chrX 8743306 intergenic not near genes chrX 8743361 intergenic not near genes chrX_4_8740001 chrX_8740001 RAL-320 2883 chrX 8922335 8922362 chrX 8922758 8922810 jockey 9 436 3.0 3.0 3.0 2.2 475 chrX 8922335 intron rdgA + chrX 8922572 intron rdgA + chrX 8922810 intron rdgA + chrX_9_8920001 chrX_8920001 RAL-320 2884 chrX 8927569 8927614 chrX 8929854 8929867 NOF 12 2284 6.5 6.5 6.5 1.6 2298 chrX 8927569 intron rdgA + chrX 8928718 intron rdgA + chrX 8929867 intron rdgA + chrX_12_8925001 chrX_8925001 RAL-320 2885 chrX 8948736 8948789 chrX 8956266 8956319 roo 16 7530 2.5 4.0 3.2 3.8 7583 chrX 8948736 intron rdgA + chrX 8952528 intron rdgA + chrX 8956319 intron rdgA + chrX_16_8950001 chrX_8950001 RAL-320 2886 chrX 9010299 9010329 chrX 9010440 9010456 9 138 1.5 1.0 1.2 4.1 157 chrX 9010299 intron,intron rdgA +,CR43836 - chrX 9010378 intron,intron rdgA +,CR43836 - chrX 9010456 intron,intron rdgA +,CR43836 - chrX_9_9010001 chrX_9010001 RAL-320 2887 chrX 9048259 9048305 chrX 9048389 9048408 11 115 2.0 4.0 3.0 2.8 149 chrX 9048259 intron,intron CR43836 -,CG42388 + chrX 9048334 intron,intron CR43836 -,CG42388 + chrX 9048408 intron,intron CR43836 -,CG42388 + chrX_11_9045001 chrX_9045001 RAL-320 2888 chrX 9062715 9062753 chrX 9062813 9062851 9 98 5.0 0.0 2.5 2.6 136 chrX 9062715 intron CG15365 - chrX 9062783 intron CG15365 - chrX 9062851 intron CG15365 - chrX_9_9060001 chrX_9060001 RAL-320 2889 chrX 9273005 9273045 chrX 9273105 9273146 15 100 1.0 2.0 1.5 6.0 141 chrX 9273005 intergenic Cfp1 -,CG16892 + chrX 9273076 intergenic Cfp1 -,CG16892 + chrX 9273146 intergenic Cfp1 -,CG16892 + chrX_15_9270001 chrX_9270001 RAL-320 2890 chrX 9337926 9337961 chrX 9338032 9338073 14 105 4.5 2.0 3.2 3.3 147 chrX 9337926 intron CG34449 - chrX 9338000 intron CG34449 - chrX 9338073 exon CG34449 - chrX_14_9335001 chrX_9335001 RAL-320 2891 chrX 9508119 9508155 chrX 9509657 9509691 jockey 9 1537 9.5 3.5 6.5 1.2 1572 chrX 9508119 intron CG32700 - chrX 9508905 intron CG32700 - chrX 9509691 intron CG32700 - chrX_9_9505001 chrX_9505001 RAL-320 2892 chrX 9531637 9531671 chrX 9531737 9531771 6 100 7.0 4.0 5.5 0.9 134 chrX 9531637 intron CG32700 - chrX 9531704 intron CG32700 - chrX 9531771 intron CG32700 - chrX_6_9530001 chrX_9530001 RAL-320 2893 chrX 9543391 9543428 chrX 9543485 9543521 12 94 5.0 3.5 4.2 2.3 130 chrX 9543391 intron CG32700 - chrX 9543456 intron CG32700 - chrX 9543521 intron CG32700 - chrX_12_9540001 chrX_9540001 RAL-320 2894 chrX 9555527 9555581 chrX 9555626 9555678 5 98 3.0 3.0 3.0 1.2 151 chrX 9555527 3` UTR RpS28b + chrX 9555602 3` UTR RpS28b + chrX 9555678 3` UTR CG15317 - chrX_5_9555001 chrX_9555001 RAL-320 2895 chrX 9575804 9575821 chrX 9576113 9576152 mdg3 4 321 3.0 4.5 3.8 0.8 348 chrX 9575804 intron,exon CG32699 -,CG42395 - chrX 9575978 intron,intron CG32699 -,CG42395 - chrX 9576152 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-320 2896 chrX 9758029 9758077 chrX 9758134 9758182 13 104 4.5 0.0 2.2 4.1 153 chrX 9758029 intergenic not near genes chrX 9758106 intergenic not near genes chrX 9758182 intergenic not near genes chrX_13_9755001 chrX_9755001 RAL-320 2897 chrX 9848790 9848818 chrX 9848894 9848910 7 102 4.5 7.0 5.8 1.0 120 chrX 9848790 intron CG32698 + chrX 9848850 intron CG32698 + chrX 9848910 exon CG32698 + chrX_7_9845001 chrX_9845001 RAL-320 2898 chrX 9896031 9896045 chrX 9896128 9896142 4 97 3.5 3.5 3.5 0.9 111 chrX 9896031 intron CG15249 - chrX 9896086 intron CG15249 - chrX 9896142 intron CG15249 - chrX_4_9895001 chrX_9895001 RAL-320 2899 chrX 10138210 10138245 chrX 10145719 10145769 412 13 7521 3.0 3.5 3.2 3.1 7559 chrX 10138210 intron,intron RhoU +,CR44894 - chrX 10141990 intron,intron RhoU +,CR44894 - chrX 10145769 intron,intron RhoU +,CR44894 - chrX_13_10140001 chrX_10140001 RAL-320 2900 chrX 10267298 10267330 chrX 10276468 10276500 roo 6 9170 0.0 3.5 1.8 2.1 9202 chrX 10267298 3` UTR alpha-Man-I - chrX 10271899 intron alpha-Man-I - chrX 10276500 3` UTR alpha-Man-I - chrX_6_10270001 chrX_10270001 RAL-320 2901 chrX 10317534 10317563 chrX 10317632 10317661 5 97 1.0 1.0 1.0 2.5 127 chrX 10317534 intron alpha-Man-I - chrX 10317598 intron alpha-Man-I - chrX 10317661 intron alpha-Man-I - chrX_5_10315001 chrX_10315001 RAL-320 2902 chrX 10345225 10345242 chrX 10345342 10345369 5 119 6.0 4.5 5.2 0.8 144 chrX 10345225 intron CG43740 + chrX 10345297 intron CG43740 + chrX 10345369 intron CG43740 + chrX_5_10345001 chrX_10345001 RAL-320 2903 chrX 10348782 10348798 chrX 10356367 10356383 springer 5 7584 6.0 3.5 4.8 0.9 7601 chrX 10348782 intergenic snoRNA:U3:9B + chrX 10352582 intergenic not near genes chrX 10356383 intergenic l(1)G0289 - chrX_5_10350001 chrX_10350001 RAL-320 2904 chrX 10348805 10348820 chrX 10356364 10356377 springer 5 7572 5.0 3.0 4.0 1.0 7572 chrX 10348805 intergenic snoRNA:U3:9B + chrX 10352591 intergenic not near genes chrX 10356377 intergenic l(1)G0289 - chrX_5_10350001 chrX_10350001 RAL-320 2905 chrX 10369090 10369127 chrX 10369277 10369304 11 185 2.5 5.0 3.8 2.3 214 chrX 10369090 intron CG17841 + chrX 10369197 intron CG17841 + chrX 10369304 intron CG17841 + chrX_11_10365001 chrX_10365001 RAL-320 2906 chrX 10453060 10453103 chrX 10453268 10453279 9 206 2.0 1.0 1.5 3.6 219 chrX 10453060 intron CG32683 - chrX 10453170 intron CG32683 - chrX 10453279 intron CG32683 - chrX_9_10450001 chrX_10450001 RAL-320 2907 chrX 10506516 10506527 chrX 10506588 10506628 5 89 3.0 3.0 3.0 1.2 112 chrX 10506516 intron spri - chrX 10506572 intron spri - chrX 10506628 intron spri - chrX_5_10505001 chrX_10505001 RAL-320 2908 chrX 10525058 10525068 chrX 10532147 10532149 297 4 7087 9.0 9.0 9.0 0.4 7091 chrX 10525058 intron spri - chrX 10528604 intron spri - chrX 10532149 intron spri - chrX_4_10525001 chrX_10525001 RAL-320 2909 chrX 10532490 10532512 chrX 10532589 10532611 11 97 6.0 5.0 5.5 1.7 121 chrX 10532490 intron spri - chrX 10532550 intron spri - chrX 10532611 intron spri - chrX_11_10530001 chrX_10530001 RAL-320 2910 chrX 10550312 10550366 chrX 10550410 10550454 18 96 3.5 3.5 3.5 4.0 142 chrX 10550312 intron spri - chrX 10550383 intron spri - chrX 10550454 intron spri - chrX_18_10550001 chrX_10550001 RAL-320 2911 chrX 10550840 10550866 chrX 10552327 10552353 hobo 5 1487 3.5 3.5 3.5 1.1 1513 chrX 10550840 intron spri - chrX 10551596 intron spri - chrX 10552353 intron spri - chrX_5_10550001 chrX_10550001 RAL-320 2912 chrX 10651609 10651644 chrX 10651745 10651779 10 134 0.0 5.5 2.8 2.6 170 chrX 10651609 intron X11Lbeta + chrX 10651694 intron X11Lbeta + chrX 10651779 intron X11Lbeta + chrX_10_10650001 chrX_10650001 RAL-320 2913 chrX 10686031 10686083 chrX 10691188 10691240 roo 15 5154 3.5 5.0 4.2 2.9 5209 chrX 10686031 intron X11Lbeta + chrX 10688636 intron X11Lbeta + chrX 10691240 intron X11Lbeta + chrX_15_10685001 chrX_10685001 RAL-320 2914 chrX 10719126 10719141 chrX 10719230 10719245 8 104 0.0 7.0 3.5 1.8 119 chrX 10719126 intron CG32676 - chrX 10719186 intron CG32676 - chrX 10719245 intron CG32676 - chrX_8_10715001 chrX_10715001 RAL-320 2915 chrX 10772659 10772692 chrX 10772757 10772795 Tirant 7 88 2.0 1.0 1.5 2.8 136 chrX 10772659 intron CG15211 + chrX 10772727 intron CG15211 + chrX 10772795 intron CG15211 + chrX_7_10770001 chrX_10770001 RAL-320 2916 chrX 10803026 10803037 chrX 10803123 10803134 4 101 10.0 7.5 8.8 0.4 108 chrX 10803026 intron Imp - chrX 10803080 intron Imp - chrX 10803134 intron Imp - chrX_4_10800001 chrX_10800001 RAL-320 2917 chrX 11069140 11069192 chrX 11069303 11069326 13 160 2.0 2.5 2.2 4.1 186 chrX 11069140 intergenic not near genes chrX 11069233 intergenic not near genes chrX 11069326 intergenic not near genes chrX_13_11065001 chrX_11065001 RAL-320 2918 chrX 11095999 11096023 chrX 11103106 11103145 HMS-Beagle 7 7120 4.0 4.5 4.2 1.3 7146 chrX 11095999 intergenic not near genes chrX 11099572 intergenic not near genes chrX 11103145 intron CG42249 + chrX_7_11095001 chrX_11095001 RAL-320 2919 chrX 11141960 11142092 chrX 11142056 11142188 11 95 0.0 0.0 0.0 11.0 228 chrX 11141960 intergenic CG15199 - chrX 11142074 intergenic CG15199 -,CG15202 + chrX 11142188 intergenic CG15202 +,CG15199 - chrX_11_11140001 chrX_11140001 RAL-320 2920 chrX 11167795 11167823 chrX 11167887 11167928 9 97 3.0 3.5 3.2 2.1 133 chrX 11167795 intergenic antdh - chrX 11167862 intergenic antdh - chrX 11167928 intergenic antdh - chrX_9_11165001 chrX_11165001 RAL-320 2921 chrX 11184239 11184280 chrX 11189335 11189368 flea 8 5092 2.5 3.0 2.8 2.1 5129 chrX 11184239 intergenic not near genes chrX 11186804 intergenic not near genes chrX 11189368 intergenic not near genes chrX_8_11185001 chrX_11185001 RAL-320 2922 chrX 11205282 11205322 chrX 11205373 11205418 16 95 4.5 6.0 5.2 2.6 136 chrX 11205282 intergenic not near genes chrX 11205350 intergenic not near genes chrX 11205418 intergenic not near genes chrX_16_11205001 chrX_11205001 RAL-320 2923 chrX 11273910 11273943 chrX 11274145 11274148 7 233 6.0 3.5 4.8 1.2 238 chrX 11273910 intron CG44422 - chrX 11274029 intron CG44422 - chrX 11274148 intron CG44422 - chrX_7_11270001 chrX_11270001 RAL-320 2924 chrX 11312076 11312089 chrX 11319419 11319461 Stalker2 5 7357 3.5 6.0 4.8 0.9 7385 chrX 11312076 intergenic not near genes chrX 11315768 intergenic not near genes chrX 11319461 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-320 2925 chrX 11379747 11379788 chrX 11379912 11379934 9 157 6.5 4.5 5.5 1.4 187 chrX 11379747 intron dlg1 + chrX 11379840 intron dlg1 + chrX 11379934 intron dlg1 + chrX_9_11375001 chrX_11375001 RAL-320 2926 chrX 11431613 11431619 chrX 11431720 11431726 4 106 0.0 5.0 2.5 1.1 113 chrX 11431613 3` UTR Evi5 - chrX 11431670 3` UTR Evi5 - chrX 11431726 3` UTR Evi5 - chrX_4_11430001 chrX_11430001 RAL-320 2927 chrX 11499095 11499140 chrX 11499193 11499207 7 93 0.5 6.0 3.2 1.7 112 chrX 11499095 intron Drak + chrX 11499151 intron Drak + chrX 11499207 intron Drak + chrX_7_11495001 chrX_11495001 RAL-320 2928 chrX 11633395 11633445 chrX 11640469 11640519 297 18 7073 3.5 2.5 3.0 4.5 7124 chrX 11633395 intron Ptp10D + chrX 11636957 intron Ptp10D + chrX 11640519 intron Ptp10D + chrX_18_11635001 chrX_11635001 RAL-320 2929 chrX 11645098 11645130 chrX 11648281 11648285 NOF 4 3176 5.0 3.5 4.2 0.8 3187 chrX 11645098 intron Ptp10D + chrX 11646692 intron Ptp10D + chrX 11648285 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-320 2930 chrX 11719858 11719898 chrX 11719958 11719998 12 100 2.5 6.0 4.2 2.3 140 chrX 11719858 3` UTR prtp + chrX 11719928 intergenic prtp +,Tango10 + chrX 11719998 intergenic prtp +,Tango10 + chrX_12_11715001 chrX_11715001 RAL-320 2931 chrX 11798998 11799028 chrX 11799104 11799134 11 104 5.0 4.5 4.8 1.9 136 chrX 11798998 intron CkIIbeta + chrX 11799066 intron CkIIbeta + chrX 11799134 intron CkIIbeta + chrX_11_11795001 chrX_11795001 RAL-320 2932 chrX 11922349 11922380 chrX 11922502 11922533 9 151 5.5 4.0 4.8 1.6 184 chrX 11922349 exon Sclp - chrX 11922441 intron Sclp - chrX 11922533 intron Sclp - chrX_9_11920001 chrX_11920001 RAL-320 2933 chrX 12038066 12038116 chrX 12038280 12038330 14 210 1.0 3.0 2.0 4.7 264 chrX 12038066 intergenic not near genes chrX 12038198 intergenic not near genes chrX 12038330 intergenic not near genes chrX_14_12035001 chrX_12035001 RAL-320 2934 chrX 12094029 12094063 chrX 12094126 12094143 5 86 2.0 2.5 2.2 1.6 114 chrX 12094029 intron,intron CR43960 +,Ten-a + chrX 12094086 intron,intron CR43960 +,Ten-a + chrX 12094143 intron,intron CR43960 +,Ten-a + chrX_5_12090001 chrX_12090001 RAL-320 2935 chrX 12150273 12150304 chrX 12150647 12150651 5 371 6.0 8.5 7.2 0.6 378 chrX 12150273 intron Ten-a + chrX 12150462 intron Ten-a + chrX 12150651 intron Ten-a + chrX_5_12150001 chrX_12150001 RAL-320 2936 chrX 12168122 12168165 chrX 12173578 12173582 I-element 7 5451 2.5 3.0 2.8 1.8 5460 chrX 12168122 intron Ten-a + chrX 12170852 intron Ten-a + chrX 12173582 intron Ten-a + chrX_7_12170001 chrX_12170001 RAL-320 2937 chrX 12202786 12202798 chrX 12202859 12202899 4 96 2.5 6.0 4.2 0.8 113 chrX 12202786 intron Ten-a + chrX 12202842 intron Ten-a + chrX 12202899 intron Ten-a + chrX_4_12200001 chrX_12200001 RAL-320 2938 chrX 12224506 12224545 chrX 12224618 12224629 5 106 2.5 1.5 2.0 1.7 123 chrX 12224506 intron Ten-a + chrX 12224568 intron Ten-a + chrX 12224629 intron Ten-a + chrX_5_12220001 chrX_12220001 RAL-320 2939 chrX 12295305 12295327 chrX 12295401 12295407 7 93 4.5 1.5 3.0 1.8 102 chrX 12295305 exon Ten-a + chrX 12295356 intron Ten-a + chrX 12295407 intron Ten-a + chrX_7_12295001 chrX_12295001 RAL-320 2940 chrX 12421220 12421519 chrX 12421325 12421615 15 98 0.0 4.0 2.0 5.0 395 chrX 12421220 intergenic not near genes chrX 12421418 intergenic not near genes chrX 12421615 intergenic not near genes chrX_15_12420001 chrX_12420001 RAL-320 2941 chrX 12430936 12430958 chrX 12431029 12431056 6 97 4.5 1.5 3.0 1.5 120 chrX 12430936 intergenic not near genes chrX 12430996 intergenic not near genes chrX 12431056 intergenic not near genes chrX_6_12430001 chrX_12430001 RAL-320 2942 chrX 12440383 12440402 chrX 12440485 12440504 5 102 0.0 7.5 3.8 1.0 121 chrX 12440383 intron Pkcdelta + chrX 12440444 intron Pkcdelta + chrX 12440504 intron Pkcdelta + chrX_5_12440001 chrX_12440001 RAL-320 2943 chrX 12442070 12442100 chrX 12442172 12442192 8 100 7.0 1.0 4.0 1.6 122 chrX 12442070 intron Pkcdelta + chrX 12442131 intron Pkcdelta + chrX 12442192 intron Pkcdelta + chrX_8_12440001 chrX_12440001 RAL-320 2944 chrX 12462544 12462573 chrX 12462627 12462676 8 96 3.0 3.0 3.0 2.0 132 chrX 12462544 intron Rab40 - chrX 12462610 intron Rab40 - chrX 12462676 intron Rab40 - chrX_8_12460001 chrX_12460001 RAL-320 2945 chrX 12492980 12492986 chrX 13057293 13057299 4 564313 4.5 20.0 12.2 0.3 564319 chrX 12492980 3` UTR Lsp1alpha + chrX 12775140 3` UTR CG32647 - chrX 13057299 intron rad + chrX_4_12775001 chrX_12775001 RAL-320 2946 chrX 12511326 12511340 chrX 12511429 12511444 4 102 0.0 4.5 2.2 1.2 118 chrX 12511326 intron CG2556 + chrX 12511385 intron CG2556 + chrX 12511444 intron CG2556 + chrX_4_12510001 chrX_12510001 RAL-320 2947 chrX 12533775 12533821 chrX 12533872 12533917 5 95 0.0 3.0 1.5 2.0 142 chrX 12533775 intron CG43921 - chrX 12533846 intron CG43921 - chrX 12533917 intron CG43921 - chrX_5_12530001 chrX_12530001 RAL-320 2948 chrX 12537268 12537561 chrX 12537385 12537657 4 106 0.0 0.0 0.0 4.0 389 chrX 12537268 intron CG43921 - chrX 12537462 intron CG43921 - chrX 12537657 intron CG43921 - chrX_4_12535001 chrX_12535001 RAL-320 2949 chrX 9845359 9845361 chrX 12546496 12546496 gypsy5 4 2701136 14.5 21.5 18.0 0.2 2701137 chrX 9845359 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_4_11195001 chrX_11195001 RAL-320 2950 chrX 12609066 12609111 chrX 12609163 12609209 10 96 4.0 2.5 3.2 2.4 143 chrX 12609066 3` UTR Sec16 + chrX 12609138 3` UTR Sec16 + chrX 12609209 3` UTR Sec16 + chrX_10_12605001 chrX_12605001 RAL-320 2951 chrX 12752258 12752303 chrX 12752365 12752410 19 105 3.0 4.0 3.5 4.2 152 chrX 12752258 5` UTR CR44619 + chrX 12752334 5` UTR CR44619 + chrX 12752410 5` UTR CR44619 + chrX_19_12750001 chrX_12750001 RAL-320 2952 chrX 12785420 12785439 chrX 12785517 12785536 5 95 4.0 7.0 5.5 0.8 116 chrX 12785420 intergenic Pde9 -,CG32647 - chrX 12785478 intergenic Pde9 - chrX 12785536 intergenic Pde9 - chrX_5_12785001 chrX_12785001 RAL-320 2953 chrX 12917895 12917908 chrX 12917987 12918021 8 102 3.0 2.5 2.8 2.1 126 chrX 12917895 intron fne + chrX 12917958 intron fne + chrX 12918021 intron fne + chrX_8_12915001 chrX_12915001 RAL-320 2954 chrX 12930576 12930606 chrX 12937712 12937740 HMS-Beagle 4 7136 3.0 9.5 6.2 0.6 7164 chrX 12930576 intron fne + chrX 12934158 intron fne + chrX 12937740 intron fne + chrX_4_12930001 chrX_12930001 RAL-320 2955 chrX 12971678 12971708 chrX 12971764 12971784 5 84 4.0 3.5 3.8 1.0 106 chrX 12971678 intron,exon CR43636 -,CG15721 + chrX 12971731 intron,exon CR43636 -,CG15721 + chrX 12971784 intron,exon CR43636 -,CG15721 + chrX_5_12970001 chrX_12970001 RAL-320 2956 chrX 12977048 12977060 chrX 12977144 12977156 5 96 0.0 6.0 3.0 1.2 108 chrX 12977048 intergenic not near genes chrX 12977102 intergenic not near genes chrX 12977156 intergenic not near genes chrX_5_12975001 chrX_12975001 RAL-320 2957 chrX 13022775 13022789 chrX 13022865 13022887 5 95 7.5 4.5 6.0 0.7 112 chrX 13022775 intron,3` UTR rad +,CG2209 + chrX 13022831 intron,3` UTR rad +,CG2209 + chrX 13022887 intron,3` UTR rad +,CG2209 + chrX_5_13020001 chrX_13020001 RAL-320 2958 chrX 13022791 13022817 chrX 13022863 13022915 11 83 4.0 4.0 4.0 2.2 124 chrX 13022791 intron,3` UTR rad +,CG2209 + chrX 13022853 intron,3` UTR rad +,CG2209 + chrX 13022915 intron,3` UTR rad +,CG2209 + chrX_11_13020001 chrX_13020001 RAL-320 2959 chrX 13058441 13058452 chrX 13058598 13058609 5 156 10.0 2.0 6.0 0.7 168 chrX 13058441 intron rad + chrX 13058525 intron rad + chrX 13058609 intron rad + chrX_5_13055001 chrX_13055001 RAL-320 2960 chrX 13061269 13061283 chrX 13061350 13061360 6 88 1.5 5.0 3.2 1.4 91 chrX 13061269 intron rad + chrX 13061314 intron rad + chrX 13061360 intron rad + chrX_6_13060001 chrX_13060001 RAL-320 2961 chrX 13236887 13236892 chrX 13236988 13236997 4 104 1.5 5.5 3.5 0.9 110 chrX 13236887 intron mew - chrX 13236942 intron mew - chrX 13236997 intron mew - chrX_4_13235001 chrX_13235001 RAL-320 2962 chrX 13278139 13278178 chrX 13278242 13278273 7 102 4.5 4.0 4.2 1.3 134 chrX 13278139 intron HDAC4 - chrX 13278206 intron HDAC4 - chrX 13278273 intron HDAC4 - chrX_7_13275001 chrX_13275001 RAL-320 2963 chrX 13374851 13374853 chrX 13374930 13374953 5 92 5.5 3.5 4.5 0.9 102 chrX 13374851 intron CG1640 + chrX 13374902 intron CG1640 + chrX 13374953 intron CG1640 + chrX_5_13370001 chrX_13370001 RAL-320 2964 chrX 13401465 13401519 chrX 13401837 13401891 jockey 8 372 1.5 4.0 2.8 2.1 426 chrX 13401465 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401891 3` UTR CG12725 - chrX_8_13400001 chrX_13400001 RAL-320 2965 chrX 13429477 13429490 chrX 13430625 13430659 jockey 6 1166 3.5 8.0 5.8 0.9 1182 chrX 13429477 intergenic not near genes chrX 13430068 intergenic not near genes chrX 13430659 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-320 2966 chrX 13463637 13463673 chrX 13469234 13469254 mdg3 11 5592 5.5 4.5 5.0 1.8 5617 chrX 13463637 intron Neto + chrX 13466446 intron Neto + chrX 13469254 intron Neto + chrX_11_13465001 chrX_13465001 RAL-320 2967 chrX 13507290 13507340 chrX 13507391 13507405 9 86 2.5 3.0 2.8 2.4 115 chrX 13507290 intron Neto + chrX 13507348 intron Neto + chrX 13507405 intron Neto + chrX_9_13505001 chrX_13505001 RAL-320 2968 chrX 13658736 13658757 chrX 13658846 13658852 8 106 8.0 6.0 7.0 1.0 116 chrX 13658736 intron NFAT + chrX 13658794 intron NFAT + chrX 13658852 intron NFAT + chrX_8_13655001 chrX_13655001 RAL-320 2969 chrX 13739018 13739061 chrX 13739107 13739162 14 93 3.0 4.5 3.8 2.9 144 chrX 13739018 intron,exon Grip91 -,CG11134 + chrX 13739090 intron,3` UTR Grip91 -,CG11134 + chrX 13739162 intron,3` UTR Grip91 -,CG11134 + chrX_14_13735001 chrX_13735001 RAL-320 2970 chrX 13934291 13934319 chrX 13934394 13934422 7 101 2.0 3.5 2.8 1.8 131 chrX 13934291 intron mamo - chrX 13934356 intron mamo - chrX 13934422 intron mamo - chrX_7_13930001 chrX_13930001 RAL-320 2971 chrX 13935503 13935518 chrX 13935600 13935603 4 96 2.5 11.0 6.8 0.5 100 chrX 13935503 intron mamo - chrX 13935553 intron mamo - chrX 13935603 intron mamo - chrX_4_13935001 chrX_13935001 RAL-320 2972 chrX 13937963 13938008 chrX 13941254 13941299 I-element 5 3291 1.5 1.5 1.5 2.0 3336 chrX 13937963 intron mamo - chrX 13939631 intron mamo - chrX 13941299 intron mamo - chrX_5_13935001 chrX_13935001 RAL-320 2973 chrX 13057298 13057304 chrX 13966949 13966949 7 909648 22.5 13.5 18.0 0.4 909651 chrX 13057298 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_7_13510001 chrX_13510001 RAL-320 2974 chrX 13975889 13975908 chrX 13975956 13976005 5 89 0.0 2.0 1.0 2.5 116 chrX 13975889 intron mamo - chrX 13975947 intron mamo - chrX 13976005 intron mamo - chrX_5_13975001 chrX_13975001 RAL-320 2975 chrX 14064144 14064165 chrX 14064250 14064281 5 114 0.0 2.5 1.2 2.3 137 chrX 14064144 intergenic not near genes chrX 14064212 intergenic not near genes chrX 14064281 intergenic not near genes chrX_5_14060001 chrX_14060001 RAL-320 2976 chrX 14105012 14105041 chrX 14114178 14114208 roo 8 9168 3.0 1.5 2.2 2.5 9196 chrX 14105012 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114208 5` UTR CR44657 + chrX_8_14105001 chrX_14105001 RAL-320 2977 chrX 14142868 14142906 chrX 14142965 14143003 9 97 4.0 1.0 2.5 2.6 135 chrX 14142868 intergenic not near genes chrX 14142936 intergenic not near genes chrX 14143003 intergenic not near genes chrX_9_14140001 chrX_14140001 RAL-320 2978 chrX 14157574 14157600 chrX 14163250 14163277 297 7 5677 6.5 4.0 5.2 1.1 5703 chrX 14157574 intergenic not near genes chrX 14160426 intergenic not near genes chrX 14163277 intergenic not near genes chrX_7_14160001 chrX_14160001 RAL-320 2979 chrX 14188052 14188082 chrX 14188155 14188183 8 103 7.0 3.0 5.0 1.3 131 chrX 14188052 intergenic CG12481 + chrX 14188118 intergenic CG12481 + chrX 14188183 intergenic CG12481 + chrX_8_14185001 chrX_14185001 RAL-320 2980 chrX 14395100 14395133 chrX 14395202 14395252 12 112 3.0 2.0 2.5 3.4 152 chrX 14395100 intron dpr8 + chrX 14395176 intron dpr8 + chrX 14395252 intron dpr8 + chrX_12_14395001 chrX_14395001 RAL-320 2981 chrX 14414203 14414210 chrX 14414300 14414307 4 97 4.0 0.0 2.0 1.3 104 chrX 14414203 intron dpr8 + chrX 14414255 intron dpr8 + chrX 14414307 intron dpr8 + chrX_4_14410001 chrX_14410001 RAL-320 2982 chrX 14416295 14416328 chrX 14421082 14421115 F-element 8 4785 2.0 3.5 2.8 2.1 4820 chrX 14416295 intron dpr8 + chrX 14418705 intron dpr8 + chrX 14421115 intron dpr8 + chrX_8_14415001 chrX_14415001 RAL-320 2983 chrX 14560259 14560298 chrX 14560363 14560402 8 104 2.0 3.5 2.8 2.1 143 chrX 14560259 intergenic not near genes chrX 14560330 intergenic not near genes chrX 14560402 intergenic not near genes chrX_8_14560001 chrX_14560001 RAL-320 2984 chrX 14597721 14597746 chrX 14597818 14597843 6 96 5.0 5.0 5.0 1.0 122 chrX 14597721 intron CG9413 - chrX 14597782 intron CG9413 - chrX 14597843 intron CG9413 - chrX_6_14595001 chrX_14595001 RAL-320 2985 chrX 14636460 14636481 chrX 14641900 14641917 I-element 4 5449 8.0 3.5 5.8 0.6 5457 chrX 14636460 intron NetA - chrX 14639188 intron NetA - chrX 14641917 intron NetA - chrX_4_14635001 chrX_14635001 RAL-320 2986 chrX 14714023 14714065 chrX 14714125 14714167 15 101 4.5 4.0 4.2 2.9 144 chrX 14714023 intron NetB - chrX 14714095 intron NetB - chrX 14714167 intron NetB - chrX_15_14710001 chrX_14710001 RAL-320 2987 chrX 14778030 14778044 chrX 14782831 14782861 Doc 4 4813 7.0 6.0 6.5 0.5 4831 chrX 14778030 intergenic CG5347 + chrX 14780446 intergenic not near genes chrX 14782861 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-320 2988 chrX 14813715 14813754 chrX 14813813 14813852 14 96 8.0 2.0 5.0 2.3 137 chrX 14813715 intron rut - chrX 14813784 intron rut - chrX 14813852 intron rut - chrX_14_14810001 chrX_14810001 RAL-320 2989 chrX 14818759 14818790 chrX 14823972 14824000 copia 5 5219 4.5 5.0 4.8 0.9 5241 chrX 14818759 intron rut - chrX 14821380 intron rut - chrX 14824000 intron rut - chrX_5_14820001 chrX_14820001 RAL-320 2990 chrX 14861937 14861950 chrX 14862132 14862154 6 196 20.0 26.0 23.0 0.2 217 chrX 14861937 intron Flo2 + chrX 14862046 intron Flo2 + chrX 14862154 intron Flo2 + chrX_6_14860001 chrX_14860001 RAL-320 2991 chrX 14887972 14888013 chrX 14888069 14888111 4 97 0.5 0.0 0.2 3.3 139 chrX 14887972 intron,intron Flo2 +,CG9514 - chrX 14888042 intron,intron Flo2 +,CG9514 - chrX 14888111 intron,intron Flo2 +,CG9514 - chrX_4_14885001 chrX_14885001 RAL-320 2992 chrX 14921944 14921985 chrX 14922334 14922383 14 394 3.5 1.5 2.5 4.0 439 chrX 14921944 intron,intron Flo2 +,CG9503 - chrX 14922164 intron,intron Flo2 +,CG9503 - chrX 14922383 intron,intron Flo2 +,CG9503 - chrX_14_14920001 chrX_14920001 RAL-320 2993 chrX 14936844 14936890 chrX 14946117 14946167 roo 17 9275 5.0 4.5 4.8 2.9 9323 chrX 14936844 intron pdgy - chrX 14941506 intron pdgy - chrX 14946167 intron pdgy - chrX_17_14940001 chrX_14940001 RAL-320 2994 chrX 14950049 14950068 chrX 14950146 14950150 5 92 9.5 0.0 4.8 0.9 101 chrX 14950049 intron pdgy - chrX 14950100 intron pdgy - chrX 14950150 intron pdgy - chrX_5_14950001 chrX_14950001 RAL-320 2995 chrX 14968088 14968100 chrX 14968178 14968199 7 97 0.5 8.5 4.5 1.3 111 chrX 14968088 intron eag + chrX 14968144 intron eag + chrX 14968199 intron eag + chrX_7_14965001 chrX_14965001 RAL-320 2996 chrX 15070161 15070311 chrX 15070274 15070427 16 114 0.0 0.0 0.0 16.0 266 chrX 15070161 3` UTR Lsd-2 - chrX 15070294 3` UTR Lsd-2 - chrX 15070427 3` UTR Lsd-2 - chrX_16_15070001 chrX_15070001 RAL-320 2997 chrX 15109847 15109898 chrX 15109950 15109962 15 95 3.5 4.0 3.8 3.1 115 chrX 15109847 exon Rab3-GEF + chrX 15109904 intron Rab3-GEF + chrX 15109962 intron Rab3-GEF + chrX_15_15105001 chrX_15105001 RAL-320 2998 chrX 15127227 15127233 chrX 15127339 15127345 4 112 4.5 8.0 6.2 0.6 118 chrX 15127227 intron drd + chrX 15127286 intron drd + chrX 15127345 intron drd + chrX_4_15125001 chrX_15125001 RAL-320 2999 chrX 15243600 15243630 chrX 15243831 15243861 10 228 3.0 3.5 3.2 2.4 261 chrX 15243600 intergenic PPYR1 - chrX 15243730 intergenic PPYR1 - chrX 15243861 3` UTR PPYR1 - chrX_10_15240001 chrX_15240001 RAL-320 3000 chrX 15248246 15248261 chrX 15248342 15248357 5 94 6.5 3.0 4.8 0.9 111 chrX 15248246 intergenic not near genes chrX 15248302 intergenic not near genes chrX 15248357 intergenic not near genes chrX_5_15245001 chrX_15245001 RAL-320 3001 chrX 15248266 15248295 chrX 15248339 15248391 11 91 0.5 2.5 1.5 4.4 125 chrX 15248266 intergenic not near genes chrX 15248328 intergenic not near genes chrX 15248391 intergenic not near genes chrX_11_15245001 chrX_15245001 RAL-320 3002 chrX 15273716 15273737 chrX 15274883 15274893 1360 4 1166 1.5 3.5 2.5 1.1 1177 chrX 15273716 intergenic not near genes chrX 15274304 intergenic not near genes chrX 15274893 intergenic not near genes chrX_4_15270001 chrX_15270001 RAL-320 3003 chrX 15277621 15277668 chrX 15277726 15277773 16 102 1.0 3.5 2.2 5.0 152 chrX 15277621 intergenic not near genes chrX 15277697 intergenic not near genes chrX 15277773 intergenic not near genes chrX_16_15275001 chrX_15275001 RAL-320 3004 chrX 15413044 15413075 chrX 15417353 15417397 Juan 10 4317 8.0 3.5 5.8 1.5 4353 chrX 15413044 intron Cngl - chrX 15415220 intron Cngl - chrX 15417397 intron Cngl - chrX_10_15415001 chrX_15415001 RAL-320 3005 chrX 15421908 15421951 chrX 15423433 15423482 pogo 16 1526 4.5 2.5 3.5 3.6 1574 chrX 15421908 intron Cngl - chrX 15422695 intron Cngl - chrX 15423482 intron Cngl - chrX_16_15420001 chrX_15420001 RAL-320 3006 chrX 15435690 15435705 chrX 15436143 15436148 rover 7 452 0.0 8.0 4.0 1.4 458 chrX 15435690 intron Cngl - chrX 15435919 intron Cngl - chrX 15436148 intron Cngl - chrX_7_15435001 chrX_15435001 RAL-320 3007 chrX 15536675 15536711 chrX 15536778 15536783 10 93 7.0 17.0 12.0 0.8 108 chrX 15536675 intron Ac13E - chrX 15536729 intron Ac13E - chrX 15536783 intron Ac13E - chrX_10_15535001 chrX_15535001 RAL-320 3008 chrX 15666199 15666209 chrX 15666296 15666306 4 97 4.5 6.5 5.5 0.6 107 chrX 15666199 intergenic CR43299 - chrX 15666252 intergenic not near genes chrX 15666306 intergenic not near genes chrX_4_15665001 chrX_15665001 RAL-320 3009 chrX 15666223 15666224 chrX 15666290 15666319 4 84 4.0 4.5 4.2 0.8 96 chrX 15666223 intergenic not near genes chrX 15666271 intergenic not near genes chrX 15666319 intergenic not near genes chrX_4_15665001 chrX_15665001 RAL-320 3010 chrX 15939257 15939303 chrX 15939357 15939408 9 100 1.5 1.0 1.2 4.1 151 chrX 15939257 intron Stim - chrX 15939332 intron Stim - chrX 15939408 intron Stim - chrX_9_15935001 chrX_15935001 RAL-320 3011 chrX 15959531 15959558 chrX 15959629 15959666 13 105 6.0 3.5 4.8 2.2 135 chrX 15959531 intron mmd - chrX 15959598 intron mmd - chrX 15959666 intron mmd - chrX_13_15955001 chrX_15955001 RAL-320 3012 chrX 16195408 16195452 chrX 16195518 16195547 10 102 6.5 2.0 4.2 1.9 139 chrX 16195408 intergenic not near genes chrX 16195478 intergenic not near genes chrX 16195547 intergenic not near genes chrX_10_16195001 chrX_16195001 RAL-320 3013 chrX 16222760 16222806 chrX 16231130 16231175 roo 9 8369 3.0 3.5 3.2 2.1 8415 chrX 16222760 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231175 intergenic not near genes chrX_9_16225001 chrX_16225001 RAL-320 3014 chrX 16295505 16295526 chrX 16295609 16295630 4 101 5.0 0.0 2.5 1.1 125 chrX 16295505 intron CG9911 - chrX 16295568 intron CG9911 - chrX 16295630 intron CG9911 - chrX_4_16295001 chrX_16295001 RAL-320 3015 chrX 16329439 16329442 chrX 16329506 16329520 5 83 0.0 3.5 1.8 1.8 81 chrX 16329439 intron CG9919 - chrX 16329480 intron CG9919 - chrX 16329520 exon CG9919 - chrX_5_16325001 chrX_16325001 RAL-320 3016 chrX 16437595 16437640 chrX 16437702 16437748 5 107 2.5 2.5 2.5 1.4 153 chrX 16437595 3` UTR,3` UTR hang +,CG9947 - chrX 16437672 3` UTR,3` UTR hang +,CG9947 - chrX 16437748 3` UTR,3` UTR hang +,CG9947 - chrX_5_16435001 chrX_16435001 RAL-320 3017 chrX 16492627 16492675 chrX 16498224 16498272 mdg3 20 5596 5.0 3.0 4.0 4.0 5645 chrX 16492627 intron para - chrX 16495450 intron para - chrX 16498272 exon para - chrX_20_16495001 chrX_16495001 RAL-320 3018 chrX 16623470 16623490 chrX 16623576 16623586 6 104 4.5 0.5 2.5 1.7 116 chrX 16623470 intergenic not near genes chrX 16623528 intergenic Rok - chrX 16623586 intergenic Rok - chrX_6_16620001 chrX_16620001 RAL-320 3019 chrX 16681617 16681659 chrX 16681713 16681755 8 95 4.5 5.0 4.8 1.4 138 chrX 16681617 3` UTR,intron sing +,Axs - chrX 16681686 3` UTR,intron sing +,Axs - chrX 16681755 3` UTR,intron sing +,Axs - chrX_8_16680001 chrX_16680001 RAL-320 3020 chrX 16685938 16685962 chrX 16686195 16686219 4 257 2.5 3.0 2.8 1.1 281 chrX 16685938 intron Sep4 - chrX 16686078 intron Sep4 - chrX 16686219 intron Sep4 - chrX_4_16685001 chrX_16685001 RAL-320 3021 chrX 16700547 16700554 chrX 16700629 16700631 4 90 0.5 9.0 4.8 0.7 84 chrX 16700547 intron,3` UTR CG4678 +,spheroide - chrX 16700589 intron,3` UTR CG4678 +,spheroide - chrX 16700631 intron,3` UTR CG4678 +,spheroide - chrX_4_16700001 chrX_16700001 RAL-320 3022 chrX 16764718 16764734 chrX 16764814 16764831 5 97 4.5 0.0 2.2 1.6 113 chrX 16764718 intron if - chrX 16764774 intron if - chrX 16764831 intron if - chrX_5_16760001 chrX_16760001 RAL-320 3023 chrX 16870060 16870095 chrX 16870162 16870198 8 102 4.0 3.5 3.8 1.7 138 chrX 16870060 intron CG13003 - chrX 16870129 intron CG13003 - chrX 16870198 intron CG13003 - chrX_8_16870001 chrX_16870001 RAL-320 3024 chrX 16906627 16906680 chrX 16906734 16906787 15 106 2.0 2.0 2.0 5.0 160 chrX 16906627 intron CR44754 - chrX 16906707 intron CR44754 - chrX 16906787 intron CR44754 - chrX_15_16905001 chrX_16905001 RAL-320 3025 chrX 16935992 16936034 chrX 16936430 16936447 jockey 5 432 4.0 6.5 5.2 0.8 455 chrX 16935992 intron CG4928 + chrX 16936220 intron CG4928 + chrX 16936447 intron CG4928 + chrX_5_16935001 chrX_16935001 RAL-320 3026 chrX 16965510 16965560 chrX 16965625 16965668 15 112 5.5 4.0 4.8 2.6 158 chrX 16965510 intron CG9086 - chrX 16965589 intron CG9086 - chrX 16965668 intron CG9086 - chrX_15_16965001 chrX_16965001 RAL-320 3027 chrX 17011947 17011999 chrX 17012050 17012086 10 87 3.5 6.5 5.0 1.7 139 chrX 17011947 intron CG45002 - chrX 17012016 intron CG45002 - chrX 17012086 intron CG45002 - chrX_10_17010001 chrX_17010001 RAL-320 3028 chrX 17063166 17063207 chrX 17063268 17063313 7 105 3.5 3.5 3.5 1.6 147 chrX 17063166 intron CG45002 - chrX 17063240 intron CG45002 - chrX 17063313 intron CG45002 - chrX_7_17060001 chrX_17060001 RAL-320 3029 chrX 17195199 17195234 chrX 17200303 17200338 flea 10 5094 6.0 4.0 5.0 1.7 5139 chrX 17195199 3` UTR baz + chrX 17197768 3` UTR baz + chrX 17200338 3` UTR baz + chrX_10_17195001 chrX_17195001 RAL-320 3030 chrX 17205836 17205855 chrX 17205946 17205965 6 109 4.5 6.5 5.5 0.9 129 chrX 17205836 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205965 intergenic CG32564 + chrX_6_17205001 chrX_17205001 RAL-320 3031 chrX 17237519 17237533 chrX 17237623 17237637 5 104 6.5 6.0 6.2 0.7 118 chrX 17237519 intron f + chrX 17237578 intron f + chrX 17237637 intron f + chrX_5_17235001 chrX_17235001 RAL-320 3032 chrX 17290058 17290073 chrX 17290154 17290169 4 94 3.0 6.0 4.5 0.7 111 chrX 17290058 intron,intron CG5445 +,Fim - chrX 17290114 intron,intron CG5445 +,Fim - chrX 17290169 intron,intron CG5445 +,Fim - chrX_4_17290001 chrX_17290001 RAL-320 3033 chrX 17290077 17290093 chrX 17290148 17290189 6 92 2.0 5.0 3.5 1.3 112 chrX 17290077 intron,intron CG5445 +,Fim - chrX 17290133 intron,intron CG5445 +,Fim - chrX 17290189 intron,intron CG5445 +,Fim - chrX_6_17290001 chrX_17290001 RAL-320 3034 chrX 17313871 17313880 chrX 17313972 17313981 4 101 6.0 0.5 3.2 1.0 110 chrX 17313871 intergenic not near genes chrX 17313926 intergenic not near genes chrX 17313981 intergenic not near genes chrX_4_17310001 chrX_17310001 RAL-320 3035 chrX 17313882 17313916 chrX 17313962 17314017 10 99 1.5 0.5 1.0 5.0 135 chrX 17313882 intergenic not near genes chrX 17313950 intergenic not near genes chrX 17314017 intergenic not near genes chrX_10_17310001 chrX_17310001 RAL-320 3036 chrX 17316347 17316379 chrX 17316451 17316483 9 104 4.0 0.0 2.0 3.0 136 chrX 17316347 intron B-H2 + chrX 17316415 intron B-H2 + chrX 17316483 intron B-H2 + chrX_9_17315001 chrX_17315001 RAL-320 3037 chrX 17352580 17352620 chrX 17352690 17352740 10 121 0.0 2.0 1.0 5.0 160 chrX 17352580 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352740 intergenic not near genes chrX_10_17350001 chrX_17350001 RAL-320 3038 chrX 17357525 17357538 chrX 17357631 17357652 7 112 4.0 0.5 2.2 2.2 127 chrX 17357525 intergenic not near genes chrX 17357588 intergenic not near genes chrX 17357652 intergenic not near genes chrX_7_17355001 chrX_17355001 RAL-320 3039 chrX 17429230 17429276 chrX 17429337 17429383 9 107 2.0 3.0 2.5 2.6 153 chrX 17429230 intron CG12994 - chrX 17429306 intron CG12994 - chrX 17429383 intron CG12994 - chrX_9_17425001 chrX_17425001 RAL-320 3040 chrX 17536827 17536876 chrX 17536931 17536979 10 101 0.0 4.0 2.0 3.3 152 chrX 17536827 intron CG43658 - chrX 17536903 intron CG43658 - chrX 17536979 intron CG43658 - chrX_10_17535001 chrX_17535001 RAL-320 3041 chrX 17544992 17545029 chrX 17545094 17545131 7 102 4.0 4.5 4.2 1.3 139 chrX 17544992 intron CG43658 - chrX 17545062 intron CG43658 - chrX 17545131 intron CG43658 - chrX_7_17545001 chrX_17545001 RAL-320 3042 chrX 17708813 17708856 chrX 17708910 17708955 13 97 4.5 4.0 4.2 2.5 142 chrX 17708813 intron CG8173 - chrX 17708884 intron CG8173 - chrX 17708955 intron CG8173 - chrX_13_17705001 chrX_17705001 RAL-320 3043 chrX 17716590 17716603 chrX 17716674 17716694 6 95 5.5 2.5 4.0 1.2 104 chrX 17716590 intron CG42684 + chrX 17716642 intron CG42684 + chrX 17716694 intron CG42684 + chrX_6_17715001 chrX_17715001 RAL-320 3044 chrX 17766343 17766375 chrX 17766461 17766493 4 118 2.5 1.0 1.8 1.4 150 chrX 17766343 intergenic not near genes chrX 17766418 intergenic not near genes chrX 17766493 intergenic not near genes chrX_4_17765001 chrX_17765001 RAL-320 3045 chrX 17782203 17782234 chrX 17782321 17782336 10 115 3.0 3.0 3.0 2.5 133 chrX 17782203 intergenic not near genes chrX 17782270 intergenic not near genes chrX 17782336 intergenic not near genes chrX_10_17780001 chrX_17780001 RAL-320 3046 chrX 17782574 17782587 chrX 17782657 17782691 4 91 4.5 6.0 5.2 0.6 117 chrX 17782574 intergenic not near genes chrX 17782632 intergenic not near genes chrX 17782691 intergenic not near genes chrX_4_17780001 chrX_17780001 RAL-320 3047 chrX 17792946 17792980 chrX 17796262 17796296 flea 8 3311 2.0 4.0 3.0 2.0 3350 chrX 17792946 intron OdsH + chrX 17794621 intron OdsH + chrX 17796296 intron OdsH + chrX_8_17790001 chrX_17790001 RAL-320 3048 chrX 17846263 17846307 chrX 17846365 17846406 11 100 5.5 5.0 5.2 1.8 143 chrX 17846263 intron Ucp4A + chrX 17846334 intron Ucp4A + chrX 17846406 intron Ucp4A + chrX_11_17845001 chrX_17845001 RAL-320 3049 chrX 17911833 17911874 chrX 17911941 17911982 13 105 0.0 1.0 0.5 8.7 149 chrX 17911833 intron CG6847 + chrX 17911908 intron CG6847 + chrX 17911982 intron CG6847 + chrX_13_17910001 chrX_17910001 RAL-320 3050 chrX 17965691 17965739 chrX 17965788 17965836 12 97 2.0 0.5 1.2 5.5 145 chrX 17965691 intron Sh - chrX 17965764 intron Sh - chrX 17965836 intron Sh - chrX_12_17965001 chrX_17965001 RAL-320 3051 chrX 17966584 17966589 chrX 17966695 17966700 4 111 8.5 4.5 6.5 0.5 116 chrX 17966584 intron Sh - chrX 17966642 intron Sh - chrX 17966700 intron Sh - chrX_4_17965001 chrX_17965001 RAL-320 3052 chrX 17966590 17966626 chrX 17966686 17966736 9 104 4.0 3.0 3.5 2.0 146 chrX 17966590 intron Sh - chrX 17966663 intron Sh - chrX 17966736 intron Sh - chrX_9_17965001 chrX_17965001 RAL-320 3053 chrX 17968897 17968921 chrX 17969035 17969059 9 137 6.0 5.0 5.5 1.4 162 chrX 17968897 intron Sh - chrX 17968978 intron Sh - chrX 17969059 intron Sh - chrX_9_17965001 chrX_17965001 RAL-320 3054 chrX 18141066 18141095 chrX 18141162 18141191 10 96 2.5 3.0 2.8 2.6 125 chrX 18141066 intergenic not near genes chrX 18141128 intergenic not near genes chrX 18141191 intergenic not near genes chrX_10_18140001 chrX_18140001 RAL-320 3055 chrX 18148616 18148620 chrX 18148739 18148743 4 123 5.5 1.5 3.5 0.9 127 chrX 18148616 intergenic not near genes chrX 18148680 intergenic not near genes chrX 18148743 intergenic not near genes chrX_4_18145001 chrX_18145001 RAL-320 3056 chrX 18194048 18194102 chrX 18194603 18194637 BS 14 553 4.5 2.0 3.2 3.3 589 chrX 18194048 intron Frq2 + chrX 18194342 intron Frq2 + chrX 18194637 intron Frq2 + chrX_14_18190001 chrX_18190001 RAL-320 3057 chrX 18218019 18218067 chrX 18218155 18218204 10 134 4.5 4.5 4.5 1.8 185 chrX 18218019 intron CG33639 - chrX 18218112 intron CG33639 - chrX 18218204 intron CG33639 - chrX_10_18215001 chrX_18215001 RAL-320 3058 chrX 18281539 18281563 chrX 18281631 18281633 4 84 8.5 3.0 5.8 0.6 94 chrX 18281539 intron upd3 + chrX 18281586 intron upd3 + chrX 18281633 intron upd3 + chrX_4_18280001 chrX_18280001 RAL-320 3059 chrX 18281568 18281578 chrX 18281630 18281633 6 58 5.0 3.0 4.0 1.2 65 chrX 18281568 intron upd3 + chrX 18281600 intron upd3 + chrX 18281633 intron upd3 + chrX_6_18280001 chrX_18280001 RAL-320 3060 chrX 18337400 18337456 chrX 18337520 18337566 19 116 6.0 3.0 4.5 3.5 166 chrX 18337400 intron CG6123 - chrX 18337483 intron CG6123 - chrX 18337566 intron CG6123 - chrX_19_18335001 chrX_18335001 RAL-320 3061 chrX 18427362 18427406 chrX 18427791 18427837 18 429 3.5 2.5 3.0 4.5 475 chrX 18427362 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427837 intergenic not near genes chrX_18_18425001 chrX_18425001 RAL-320 3062 chrX 18429475 18429527 chrX 18434806 18434841 Transpac 14 5328 2.5 8.0 5.2 2.3 5366 chrX 18429475 intergenic not near genes chrX 18432158 intergenic not near genes chrX 18434841 intergenic not near genes chrX_14_18430001 chrX_18430001 RAL-320 3063 chrX 18455226 18455239 chrX 18455316 18455339 7 98 4.0 3.5 3.8 1.5 113 chrX 18455226 intron CG32547 - chrX 18455282 intron CG32547 - chrX 18455339 intron CG32547 - chrX_7_18455001 chrX_18455001 RAL-320 3064 chrX 18486111 18486135 chrX 18486205 18486244 9 103 3.0 10.5 6.8 1.2 133 chrX 18486111 exon psh - chrX 18486178 intron psh - chrX 18486244 intron psh - chrX_9_18485001 chrX_18485001 RAL-320 3065 chrX 18645005 18645047 chrX 18645114 18645165 13 111 5.5 5.5 5.5 2.0 160 chrX 18645005 intron Rip11 - chrX 18645085 intron Rip11 - chrX 18645165 intron Rip11 - chrX_13_18645001 chrX_18645001 RAL-320 3066 chrX 18698827 18698853 chrX 18698964 18698990 7 136 12.0 3.5 7.8 0.8 163 chrX 18698827 intergenic not near genes chrX 18698908 intergenic not near genes chrX 18698990 intergenic not near genes chrX_7_18695001 chrX_18695001 RAL-320 3067 chrX 18896497 18896524 chrX 18896628 18896655 4 131 7.0 4.5 5.8 0.6 158 chrX 18896497 3` UTR CG7349 + chrX 18896576 3` UTR CG7349 + chrX 18896655 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-320 3068 chrX 18921936 18921958 chrX 18922011 18922047 4 91 6.0 3.0 4.5 0.7 111 chrX 18921936 intergenic not near genes chrX 18921992 intergenic not near genes chrX 18922047 intergenic not near genes chrX_4_18920001 chrX_18920001 RAL-320 3069 chrX 18947482 18947535 chrX 18947595 18947638 13 111 2.5 5.0 3.8 2.7 156 chrX 18947482 intron CG43759 + chrX 18947560 intron CG43759 + chrX 18947638 intron CG43759 + chrX_13_18945001 chrX_18945001 RAL-320 3070 chrX 18957069 18957093 chrX 18965735 18965776 roo 6 8675 5.0 2.5 3.8 1.2 8707 chrX 18957069 intron CG43759 + chrX 18961422 intron CG43759 + chrX 18965776 intron CG43759 + chrX_6_18960001 chrX_18960001 RAL-320 3071 chrX 18970429 18970483 chrX 18970535 18970588 6 101 1.5 1.0 1.2 2.7 159 chrX 18970429 intron CG43759 + chrX 18970508 intron CG43759 + chrX 18970588 intron CG43759 + chrX_6_18970001 chrX_18970001 RAL-320 3072 chrX 19048209 19048257 chrX 19048313 19048345 15 99 5.0 6.5 5.8 2.2 136 chrX 19048209 intergenic not near genes chrX 19048277 intergenic not near genes chrX 19048345 intergenic not near genes chrX_15_19045001 chrX_19045001 RAL-320 3073 chrX 19056068 19056085 chrX 19056171 19056208 8 115 4.5 1.5 3.0 2.0 140 chrX 19056068 intergenic not near genes chrX 19056138 intergenic not near genes chrX 19056208 intergenic not near genes chrX_8_19055001 chrX_19055001 RAL-320 3074 chrX 19060402 19060438 chrX 19065206 19065242 Doc 8 4802 4.0 8.5 6.2 1.1 4840 chrX 19060402 intron CG14190 + chrX 19062822 intron CG14190 + chrX 19065242 intron CG14190 + chrX_8_19060001 chrX_19060001 RAL-320 3075 chrX 19080312 19080356 chrX 19080435 19080466 16 122 1.5 2.0 1.8 5.7 154 chrX 19080312 intergenic not near genes chrX 19080389 intergenic not near genes chrX 19080466 intergenic not near genes chrX_16_19080001 chrX_19080001 RAL-320 3076 chrX 19098736 19098750 chrX 19098850 19098864 7 113 0.5 4.0 2.2 2.2 128 chrX 19098736 intergenic not near genes chrX 19098800 intergenic not near genes chrX 19098864 intergenic not near genes chrX_7_19095001 chrX_19095001 RAL-320 3077 chrX 19101191 19101208 chrX 19101288 19101343 5 117 0.5 0.0 0.2 4.2 152 chrX 19101191 intergenic not near genes chrX 19101267 intergenic not near genes chrX 19101343 intergenic not near genes chrX_5_19100001 chrX_19100001 RAL-320 3078 chrX 19106812 19106831 chrX 19106901 19106912 5 92 8.5 5.0 6.8 0.6 100 chrX 19106812 intergenic not near genes chrX 19106862 intergenic not near genes chrX 19106912 intergenic not near genes chrX_5_19105001 chrX_19105001 RAL-320 3079 chrX 19119684 19119706 chrX 19119790 19119812 8 106 4.0 0.0 2.0 2.7 128 chrX 19119684 intergenic not near genes chrX 19119748 intergenic not near genes chrX 19119812 intergenic not near genes chrX_8_19115001 chrX_19115001 RAL-320 3080 chrX 19124420 19124464 chrX 19124528 19124572 4 108 3.5 6.0 4.8 0.7 152 chrX 19124420 intergenic CG15882 - chrX 19124496 intergenic CG15882 - chrX 19124572 intergenic CG15882 -,tgy - chrX_4_19120001 chrX_19120001 RAL-320 3081 chrX 19136540 19136584 chrX 19143480 19143523 412 7 6938 2.5 2.5 2.5 2.0 6983 chrX 19136540 intergenic not near genes chrX 19140032 intergenic not near genes chrX 19143523 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 RAL-320 3082 chrX 19315513 19315538 chrX 19315732 19315736 4 211 4.0 3.5 3.8 0.8 223 chrX 19315513 intron out - chrX 19315624 intron out - chrX 19315736 intron out - chrX_4_19315001 chrX_19315001 RAL-320 3083 chrX 19339733 19339772 chrX 19339829 19339868 12 94 0.5 2.0 1.2 5.5 135 chrX 19339733 intron nAChRalpha7 - chrX 19339800 intron nAChRalpha7 - chrX 19339868 intron nAChRalpha7 - chrX_12_19335001 chrX_19335001 RAL-320 3084 chrX 19352459 19352503 chrX 19370482 19370529 11 18026 20.0 5.5 12.8 0.8 18070 chrX 19352459 intergenic not near genes chrX 19361494 intron kek5 + chrX 19370529 intron kek5 + chrX_11_19360001 chrX_19360001 RAL-320 3085 chrX 19356968 19356992 chrX 19358429 19358453 NOF 8 1460 10.0 0.5 5.2 1.3 1485 chrX 19356968 intron kek5 + chrX 19357710 intron kek5 + chrX 19358453 intron kek5 + chrX_8_19355001 chrX_19355001 RAL-320 3086 chrX 19380157 19380179 chrX 19380413 19380428 pogo 10 259 5.0 5.0 5.0 1.7 271 chrX 19380157 intron kek5 + chrX 19380292 intron kek5 + chrX 19380428 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-320 3087 chrX 19430519 19430565 chrX 19430637 19430683 15 117 2.5 2.5 2.5 4.3 164 chrX 19430519 intron kek5 + chrX 19430601 intron kek5 + chrX 19430683 intron kek5 + chrX_15_19430001 chrX_19430001 RAL-320 3088 chrX 19461129 19461173 chrX 19461238 19461289 11 112 3.0 4.5 3.8 2.3 160 chrX 19461129 intron kek5 + chrX 19461209 intron kek5 + chrX 19461289 intron kek5 + chrX_11_19460001 chrX_19460001 RAL-320 3089 chrX 19472118 19472154 chrX 19472698 19472744 jockey 4 580 4.5 4.5 4.5 0.7 626 chrX 19472118 intergenic kek5 + chrX 19472431 intergenic not near genes chrX 19472744 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-320 3090 chrX 19542114 19542166 chrX 19542232 19542284 11 117 1.5 0.5 1.0 5.5 170 chrX 19542114 intron CG32532 - chrX 19542199 intron CG32532 - chrX 19542284 intron CG32532 - chrX_11_19540001 chrX_19540001 RAL-320 3091 chrX 19593930 19593973 chrX 19594035 19594078 9 101 3.5 4.0 3.8 1.9 148 chrX 19593930 exon CG14205 + chrX 19594004 intron CG14205 + chrX 19594078 intron CG14205 + chrX_9_19590001 chrX_19590001 RAL-320 3092 chrX 19595712 19595741 chrX 19595821 19595850 12 108 2.0 6.5 4.2 2.3 138 chrX 19595712 intergenic CG14205 + chrX 19595781 intergenic CG14205 + chrX 19595850 intergenic CG14205 + chrX_12_19595001 chrX_19595001 RAL-320 3093 chrX 19662012 19662026 chrX 19662255 19662268 8 242 7.5 2.5 5.0 1.3 256 chrX 19662012 intron CG14223 - chrX 19662140 intron CG14223 - chrX 19662268 intron CG14223 - chrX_8_19660001 chrX_19660001 RAL-320 3094 chrX 19662027 19662055 chrX 19662253 19662298 8 240 4.5 2.5 3.5 1.8 271 chrX 19662027 intron CG14223 - chrX 19662162 intron CG14223 - chrX 19662298 intron CG14223 - chrX_8_19660001 chrX_19660001 RAL-320 3095 chrX 19710068 19710101 chrX 19711857 19711907 S-element 6 1796 1.5 4.5 3.0 1.5 1839 chrX 19710068 intron meso18E - chrX 19710988 intron meso18E - chrX 19711907 intron meso18E - chrX_6_19710001 chrX_19710001 RAL-320 3096 chrX 19787636 19787652 chrX 19787807 19787823 6 168 10.5 4.5 7.5 0.7 187 chrX 19787636 intron CR44885 - chrX 19787730 intron CR44885 - chrX 19787823 intron CR44885 - chrX_6_19785001 chrX_19785001 RAL-320 3097 chrX 19880383 19880393 chrX 19880522 19880532 4 139 4.0 8.5 6.2 0.6 149 chrX 19880383 intron Hers + chrX 19880458 intron Hers + chrX 19880532 intron Hers + chrX_4_19880001 chrX_19880001 RAL-320 3098 chrX 19881439 19881485 chrX 19881534 19881586 12 97 2.5 3.5 3.0 3.0 147 chrX 19881439 intron Hers + chrX 19881512 intron Hers + chrX 19881586 intron Hers + chrX_12_19880001 chrX_19880001 RAL-320 3099 chrX 19983877 19983897 chrX 19983952 19983997 6 93 0.0 3.5 1.8 2.1 120 chrX 19983877 intergenic not near genes chrX 19983937 intergenic not near genes chrX 19983997 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-320 3100 chrX 20041514 20041561 chrX 20041614 20041661 18 99 3.5 5.0 4.2 3.5 147 chrX 20041514 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041661 intron Dop2R - chrX_18_20040001 chrX_20040001 RAL-320 3101 chrX 20125378 20125398 chrX 20125480 20125500 5 102 3.0 9.5 6.2 0.7 122 chrX 20125378 intergenic CG34331 + chrX 20125439 intergenic CG34331 + chrX 20125500 intergenic CG34331 + chrX_5_20125001 chrX_20125001 RAL-320 3102 chrX 20132283 20132308 chrX 20132386 20132399 6 98 1.5 4.5 3.0 1.5 116 chrX 20132283 intergenic not near genes chrX 20132341 intergenic not near genes chrX 20132399 intergenic not near genes chrX_6_20130001 chrX_20130001 RAL-320 3103 chrX 20269950 20269957 chrX 20270020 20270056 4 90 3.0 3.5 3.2 1.0 106 chrX 20269950 intergenic Inx6 - chrX 20270003 intergenic Inx6 - chrX 20270056 intergenic Inx6 - chrX_4_20265001 chrX_20265001 RAL-320 3104 chrX 20271489 20271527 chrX 20271601 20271619 11 110 2.5 0.0 1.2 5.0 130 chrX 20271489 intergenic not near genes chrX 20271554 intergenic not near genes chrX 20271619 intergenic not near genes chrX_11_20270001 chrX_20270001 RAL-320 3105 chrX 20312865 20312911 chrX 20312963 20313006 13 94 2.5 4.5 3.5 2.9 141 chrX 20312865 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313006 intron CG1504 - chrX_13_20310001 chrX_20310001 RAL-320 3106 chrX 20320281 20320306 chrX 20320378 20320403 4 97 3.0 2.0 2.5 1.1 122 chrX 20320281 intron CG1504 - chrX 20320342 intron CG1504 - chrX 20320403 intron CG1504 - chrX_4_20320001 chrX_20320001 RAL-320 3107 chrX 20369300 20369342 chrX 20369404 20369445 15 102 1.0 2.5 1.8 5.4 145 chrX 20369300 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369445 intergenic not near genes chrX_15_20365001 chrX_20365001 RAL-320 3108 chrX 20377327 20377341 chrX 20378814 20378823 hobo 5 1486 4.5 5.5 5.0 0.8 1496 chrX 20377327 intergenic not near genes chrX 20378075 intergenic not near genes chrX 20378823 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-320 3109 chrX 20443160 20443178 chrX 20443256 20443264 5 94 8.0 4.5 6.2 0.7 104 chrX 20443160 exon CG1695 + chrX 20443212 intron CG1695 + chrX 20443264 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-320 3110 chrX 20443180 20443205 chrX 20443246 20443301 5 86 1.0 3.5 2.2 1.6 121 chrX 20443180 intron CG1695 + chrX 20443240 intron CG1695 + chrX 20443301 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-320 3111 chrX 20448417 20448467 chrX 20448521 20448573 9 105 1.5 0.5 1.0 4.5 156 chrX 20448417 intergenic not near genes chrX 20448495 intergenic not near genes chrX 20448573 intergenic not near genes chrX_9_20445001 chrX_20445001 RAL-320 3112 chrX 20467994 20468027 chrX 20468103 20468136 6 109 4.5 0.0 2.2 1.9 142 chrX 20467994 intron GstT3 + chrX 20468065 intron GstT3 + chrX 20468136 intron GstT3 + chrX_6_20465001 chrX_20465001 RAL-320 3113 chrX 20493918 20493928 chrX 20494099 20494109 8 181 0.0 6.5 3.2 1.9 191 chrX 20493918 intron RhoGAP19D - chrX 20494014 intron RhoGAP19D - chrX 20494109 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 RAL-320 3114 chrX 20504112 20504119 chrX 20505653 20505660 transib2 4 1541 12.0 5.0 8.5 0.4 1548 chrX 20504112 intron RhoGAP19D - chrX 20504886 intron RhoGAP19D - chrX 20505660 intron RhoGAP19D - chrX_4_20500001 chrX_20500001 RAL-320 3115 chrX 20504125 20504151 chrX 20505645 20505681 transib2 7 1529 5.5 2.5 4.0 1.4 1556 chrX 20504125 intron RhoGAP19D - chrX 20504903 intron RhoGAP19D - chrX 20505681 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-320 3116 chrX 20517228 20517234 chrX 20517334 20517340 4 106 11.0 0.5 5.8 0.6 112 chrX 20517228 intron Tak1 - chrX 20517284 intron Tak1 - chrX 20517340 intron Tak1 - chrX_4_20515001 chrX_20515001 RAL-320 3117 chrX 20517237 20517255 chrX 20517332 20517350 8 98 6.5 0.5 3.5 1.8 113 chrX 20517237 intron Tak1 - chrX 20517294 intron Tak1 - chrX 20517350 intron Tak1 - chrX_8_20515001 chrX_20515001 RAL-320 3118 chrX 20528596 20528630 chrX 20528959 20528991 8 364 3.5 9.5 6.5 1.1 395 chrX 20528596 intergenic not near genes chrX 20528794 intergenic not near genes chrX 20528991 intergenic not near genes chrX_8_20525001 chrX_20525001 RAL-320 3119 chrX 20534412 20534460 chrX 20534576 20534625 7 165 5.5 4.5 5.0 1.2 213 chrX 20534412 intergenic not near genes chrX 20534518 intergenic not near genes chrX 20534625 intergenic not near genes chrX_7_20530001 chrX_20530001 RAL-320 3120 chrX 20583733 20583739 chrX 20583909 20583930 4 185 2.5 0.0 1.2 1.8 197 chrX 20583733 intergenic not near genes chrX 20583832 intergenic not near genes chrX 20583930 intergenic not near genes chrX_4_20580001 chrX_20580001 RAL-320 3121 chrX 20622828 20622872 chrX 20622947 20622991 12 118 3.0 5.5 4.2 2.3 163 chrX 20622828 intron RunxA - chrX 20622910 intron RunxA - chrX 20622991 intron RunxA - chrX_12_20620001 chrX_20620001 RAL-320 3122 chrX 20662298 20662311 chrX 20662401 20662409 4 102 6.5 0.0 3.2 1.0 111 chrX 20662298 intron CG1835 + chrX 20662354 intron CG1835 + chrX 20662409 intron CG1835 + chrX_4_20660001 chrX_20660001 RAL-320 3123 chrX 20710415 20710430 chrX 20710513 20710528 6 98 2.0 4.0 3.0 1.5 113 chrX 20710415 intergenic not near genes chrX 20710472 intergenic not near genes chrX 20710528 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-320 3124 chrX 20719186 20719200 chrX 20719539 20719552 6 353 4.0 6.5 5.2 1.0 366 chrX 20719186 intergenic not near genes chrX 20719369 intergenic not near genes chrX 20719552 intergenic not near genes chrX_6_20715001 chrX_20715001 RAL-320 3125 chrX 20780208 20780225 chrX 20780453 20780470 6 245 6.5 5.0 5.8 0.9 262 chrX 20780208 intron,3` UTR shakB -,CG32507 - chrX 20780339 intron,3` UTR shakB -,CG32507 - chrX 20780470 intron,3` UTR shakB -,CG32507 - chrX_6_20780001 chrX_20780001 RAL-320 3126 chrX 20836706 20836759 chrX 20844328 20844331 roo 17 7616 5.0 3.0 4.0 3.4 7625 chrX 20836706 intron shakB - chrX 20840518 intron shakB - chrX 20844331 intron shakB - chrX_17_20840001 chrX_20840001 RAL-320 3127 chrX 20915037 20915072 chrX 20915217 20915263 8 189 1.0 1.5 1.2 3.6 226 chrX 20915037 intron shakB - chrX 20915150 intron shakB - chrX 20915263 intron shakB - chrX_8_20915001 chrX_20915001 RAL-320 3128 chrX 20940703 20940755 chrX 20942192 20942217 hobo 8 1479 2.5 3.0 2.8 2.1 1514 chrX 20940703 intergenic not near genes chrX 20941460 intergenic not near genes chrX 20942217 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-320 3129 chrX 20948270 20948284 chrX 20948348 20948391 5 102 0.0 5.0 2.5 1.4 121 chrX 20948270 intergenic not near genes chrX 20948330 intergenic not near genes chrX 20948391 intergenic not near genes chrX_5_20945001 chrX_20945001 RAL-320 3130 chrX 20974176 20974205 chrX 20974353 20974409 4 197 2.0 0.0 1.0 2.0 233 chrX 20974176 intergenic not near genes chrX 20974292 intergenic not near genes chrX 20974409 intergenic not near genes chrX_4_20970001 chrX_20970001 RAL-320 3131 chrX 21061865 21061894 chrX 21062371 21062398 roo 6 504 5.5 4.5 5.0 1.0 533 chrX 21061865 intron bves + chrX 21062132 intron bves + chrX 21062398 intron,3` UTR bves +,CG32512 - chrX_6_21060001 chrX_21060001 RAL-320 3132 chrX 21078750 21078781 chrX 21078848 21078861 10 92 2.5 0.5 1.5 4.0 111 chrX 21078750 intron bves + chrX 21078806 intron bves + chrX 21078861 intron bves + chrX_10_21075001 chrX_21075001 RAL-320 3133 chrX 21084534 21084569 chrX 21085069 21085104 9 535 8.0 1.5 4.8 1.6 570 chrX 21084534 intergenic not near genes chrX 21084819 intergenic not near genes chrX 21085104 intergenic not near genes chrX_9_21080001 chrX_21080001 RAL-320 3134 chrX 21086124 21086150 chrX 21087166 21087190 jockey 11 1039 6.5 5.5 6.0 1.6 1066 chrX 21086124 intergenic not near genes chrX 21086657 intergenic not near genes chrX 21087190 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-320 3135 chrX 21086151 21086158 chrX 21087162 21087207 jockey 4 1040 5.5 5.5 5.5 0.6 1056 chrX 21086151 intergenic not near genes chrX 21086679 intergenic not near genes chrX 21087207 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-320 3136 chrX 21190559 21190813 chrX 21190735 21190914 8 157 4.0 0.0 2.0 2.7 355 chrX 21190559 intergenic not near genes chrX 21190736 intergenic not near genes chrX 21190914 intergenic not near genes chrX_8_21190001 chrX_21190001 RAL-320 3137 chrX 21264717 21264724 chrX 21264813 21264820 4 96 5.5 2.5 4.0 0.8 103 chrX 21264717 intron CG32521 - chrX 21264768 intron CG32521 - chrX 21264820 intron CG32521 - chrX_4_21260001 chrX_21260001 RAL-320 3138 chrX 21264725 21264762 chrX 21264806 21264837 14 90 1.5 2.5 2.0 4.7 112 chrX 21264725 intron CG32521 - chrX 21264781 intron CG32521 - chrX 21264837 intron CG32521 - chrX_14_21260001 chrX_21260001 RAL-320 3139 chrX 21328100 21328141 chrX 21328231 21328272 16 130 4.0 4.0 4.0 3.2 172 chrX 21328100 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328272 intergenic CG1486 +,tty - chrX_16_21325001 chrX_21325001 RAL-320 3140 chrX 21358073 21358077 chrX 21358165 21358172 4 97 5.0 2.5 3.8 0.8 99 chrX 21358073 intergenic sol +,Sep1 + chrX 21358122 intergenic Sep1 +,sol + chrX 21358172 intergenic Sep1 +,sol + chrX_4_21355001 chrX_21355001 RAL-320 3141 chrX 21358081 21358096 chrX 21358156 21358196 5 95 3.0 2.0 2.5 1.4 115 chrX 21358081 intergenic sol +,Sep1 + chrX 21358138 intergenic Sep1 +,sol + chrX 21358196 intergenic Sep1 +,sol + chrX_5_21355001 chrX_21355001 RAL-320 3142 chrX 21388359 21388406 chrX 21388536 21388581 8 175 3.5 0.5 2.0 2.7 222 chrX 21388359 intergenic Hlc - chrX 21388470 intergenic not near genes chrX 21388581 intergenic mst + chrX_8_21385001 chrX_21385001 RAL-320 3143 chrX 21410401 21410446 chrX 21410681 21410720 8 275 1.5 3.5 2.5 2.3 319 chrX 21410401 intron CR45003 - chrX 21410560 intergenic CR45003 - chrX 21410720 intergenic CR45003 - chrX_8_21410001 chrX_21410001 RAL-320 3144 chrX 21419700 21419717 chrX 21419808 21419822 4 107 5.5 6.0 5.8 0.6 122 chrX 21419700 intergenic not near genes chrX 21419761 intergenic not near genes chrX 21419822 intergenic not near genes chrX_4_21415001 chrX_21415001 RAL-320 3145 chrX 21419718 21419732 chrX 21419795 21419840 6 97 3.5 5.0 4.2 1.2 122 chrX 21419718 intergenic not near genes chrX 21419779 intergenic not near genes chrX 21419840 intergenic not near genes chrX_6_21415001 chrX_21415001 RAL-320 3146 chrX 21429980 21430029 chrX 21430078 21430127 16 97 2.5 3.0 2.8 4.2 147 chrX 21429980 intron CG42343 - chrX 21430054 intron CG42343 - chrX 21430127 intron CG42343 - chrX_16_21430001 chrX_21430001 RAL-320 3147 chrX 21439517 21439569 chrX 21439618 21439667 11 100 3.0 4.0 3.5 2.4 150 chrX 21439517 intron CG42343 - chrX 21439592 intron CG42343 - chrX 21439667 intron CG42343 - chrX_11_21435001 chrX_21435001 RAL-320 3148 chrX 21458685 21458699 chrX 21464141 21464155 Ivk 6 5455 7.0 9.0 8.0 0.7 5470 chrX 21458685 intergenic not near genes chrX 21461420 intergenic not near genes chrX 21464155 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-320 3149 chrX 21458702 21458730 chrX 21464133 21464148 Ivk 6 5446 3.5 8.0 5.8 0.9 5446 chrX 21458702 intergenic not near genes chrX 21461425 intergenic not near genes chrX 21464148 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-320 3150 chrX 21565402 21565429 chrX 21565494 21565527 7 97 3.5 4.0 3.8 1.5 125 chrX 21565402 intergenic not near genes chrX 21565464 intergenic not near genes chrX 21565527 intergenic not near genes chrX_7_21565001 chrX_21565001 RAL-320 3151 chrX 21668249 21668290 chrX 21668343 21668383 6 97 22.0 17.5 19.8 0.3 134 chrX 21668249 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668383 intergenic not near genes chrX_6_21665001 chrX_21665001 RAL-320 3152 chrX 22448254 22448293 chrX 22448408 22448452 4 156 2.5 4.5 3.5 0.9 198 chrX 22448254 intron CG14615 - chrX 22448353 intron CG14615 - chrX 22448452 intron CG14615 - chrX_4_22445001 chrX_22445001 RAL-320 3153 chrX 22478870 22478898 chrX 22479023 22479051 8 152 0.0 1.0 0.5 5.3 181 chrX 22478870 intron CG12576 - chrX 22478960 intron CG12576 - chrX 22479051 intron CG12576 - chrX_8_22475001 chrX_22475001 RAL-320 3154 chrX 22564556 22564577 chrX 22575113 22575145 jockey 4 10564 15.5 13.0 14.2 0.3 10589 chrX 22564556 intergenic not near genes chrX 22569850 intergenic not near genes chrX 22575145 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-320 3155 chrX 22660553 22660604 chrX 22660657 22660708 7 94 3.5 0.0 1.8 2.5 155 chrX 22660553 intron CR44997 + chrX 22660630 intron CR44997 + chrX 22660708 intron CR44997 + chrX_7_22660001 chrX_22660001 RAL-320 3156 chrX 22697481 22697518 chrX 22701798 22701827 Juan 14 4316 3.5 8.5 6.0 2.0 4346 chrX 22697481 intron CR44997 + chrX 22699654 intron CR44997 + chrX 22701827 intron CR44997 + chrX_14_22695001 chrX_22695001 RAL-320 3157 chrX 22771493 22771530 chrX 22774804 22774837 297 10 3308 5.5 2.0 3.8 2.1 3344 chrX 22771493 intron CR44997 + chrX 22773165 intron CR44997 + chrX 22774837 intron CR44997 + chrX_10_22770001 chrX_22770001 RAL-320 3158 chrX 22784058 22784098 chrX 22784161 22784196 16 102 2.5 2.5 2.5 4.6 138 chrX 22784058 intron CR44997 + chrX 22784127 intron CR44997 + chrX 22784196 intron CR44997 + chrX_16_22780001 chrX_22780001 RAL-320 3159 chrX 22785612 22785625 chrX 22785718 22785730 4 104 6.5 4.5 5.5 0.6 118 chrX 22785612 intron CR44997 + chrX 22785671 intron CR44997 + chrX 22785730 intron CR44997 + chrX_4_22785001 chrX_22785001 RAL-320 3160 chrX 22797011 22797024 chrX 22797084 22797094 6 84 0.5 3.0 1.8 2.1 83 chrX 22797011 intron CR44997 + chrX 22797052 intron CR44997 + chrX 22797094 intron CR44997 + chrX_6_22795001 chrX_22795001 RAL-320 3161 chrX 22824221 22824243 chrX 22824367 22824389 7 145 0.0 5.0 2.5 2.0 168 chrX 22824221 intergenic fog - chrX 22824305 intergenic fog - chrX 22824389 3` UTR fog - chrX_7_22820001 chrX_22820001 RAL-320 3162 chrX 22824247 22824441 chrX 22824362 22824594 10 147 3.5 4.5 4.0 2.0 347 chrX 22824247 intergenic fog - chrX 22824420 3` UTR fog - chrX 22824594 3` UTR fog - chrX_10_22820001 chrX_22820001 RAL-320 3163 chrX 22844522 22844526 chrX 22844629 22844633 5 107 7.0 3.5 5.2 0.8 111 chrX 22844522 intron,intron fog -,CG42346 + chrX 22844578 intron,intron fog -,CG42346 + chrX 22844633 intron,intron fog -,CG42346 + chrX_5_22840001 chrX_22840001 RAL-320 3164 chrX 22922501 22922539 chrX 22922600 22922628 8 88 4.5 3.0 3.8 1.7 127 chrX 22922501 intergenic not near genes chrX 22922564 intergenic not near genes chrX 22922628 intergenic not near genes chrX_8_22920001 chrX_22920001 RAL-320 3165 chrX 22929940 22929959 chrX 22944436 22944470 11 14500 20.0 13.5 16.8 0.6 14530 chrX 22929940 intergenic not near genes chrX 22937205 intergenic not near genes chrX 22944470 intergenic not near genes chrX_11_22935001 chrX_22935001 RAL-320 3166 chrX 22967371 22967399 chrX 23154542 23154570 diver 5 187171 3.5 14.0 8.8 0.5 187199 chrX 22967371 intergenic not near genes chrX 23060970 intergenic not near genes chrX 23154570 intergenic not near genes chrX_5_23060001 chrX_23060001 RAL-320 3167 chrX 22987085 22987132 chrX 22989764 22989804 Burdock 11 2673 4.5 4.0 4.2 2.1 2719 chrX 22987085 intron,intron stnA -,stnB - chrX 22988444 intron,intron stnA -,stnB - chrX 22989804 intron,intron stnA -,stnB - chrX_11_22985001 chrX_22985001 RAL-320 3168 chrX 22992375 22992429 chrX 22992526 22992548 10 143 3.5 3.5 3.5 2.2 173 chrX 22992375 intron,intron stnA -,stnB - chrX 22992462 intron,intron stnA -,stnB - chrX 22992548 intron,intron stnA -,stnB - chrX_10_22990001 chrX_22990001 RAL-320 3169 chrX 22996309 22996336 chrX 23003546 23003586 roo 10 7250 4.0 3.5 3.8 2.1 7277 chrX 22996309 intron,intron stnA -,stnB - chrX 22999948 intron,intron stnA -,stnB - chrX 23003586 intron,intron stnA -,stnB - chrX_10_22995001 chrX_22995001 RAL-320 3170 chrY 975595 975819 chrY 975702 975885 6 109 92.5 131.5 112.0 0.1 290 chrY 975595 intergenic not near genes chrY 975740 intergenic not near genes chrY 975885 intergenic not near genes chrY_6_975001 chrY_975001 RAL-320 3171 chrY 1419887 1419929 chrY 1420160 1420178 6 268 10.0 7.5 8.8 0.6 291 chrY 1419887 intergenic not near genes chrY 1420032 intergenic not near genes chrY 1420178 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-320 3172 chrY 1420638 1420652 chrY 1420734 1420748 7 95 9.5 11.5 10.5 0.6 110 chrY 1420638 intergenic not near genes chrY 1420693 intergenic not near genes chrY 1420748 intergenic not near genes chrY_7_1420001 chrY_1420001 RAL-320 3173 chrY 1420638 1420695 chrY 1420764 1420798 5 123 9.5 12.0 10.8 0.4 160 chrY 1420638 intergenic not near genes chrY 1420718 intergenic not near genes chrY 1420798 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-320 3174 chrY 3561989 3562011 chrY 3562089 3562114 5 102 7.0 3.0 5.0 0.8 125 chrY 3561989 intergenic not near genes chrY 3562052 intergenic not near genes chrY 3562114 intergenic not near genes chrY_5_3560001 chrY_3560001 RAL-320