SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47470 47490 chr2L 52575 52595 jockey 5 5105 1.0 1.5 1.2 2.3 5125 chr2L 47470 intron Cda5 - chr2L 50032 intron Cda5 - chr2L 52595 intron Cda5 - chr2L_5_50001 chr2L_50001 RAL-307_75b 2 chr2L 604979 605004 chr2L 605067 605092 8 88 1.5 1.0 1.2 3.6 113 chr2L 604979 intergenic not near genes chr2L 605036 intergenic not near genes chr2L 605092 intergenic not near genes chr2L_8_605001 chr2L_605001 RAL-307_75b 3 chr2L 1415117 1415126 chr2L 1415359 1415368 4 242 0.5 1.5 1.0 2.0 251 chr2L 1415117 intron lea - chr2L 1415242 intron lea - chr2L 1415368 intron lea - chr2L_4_1415001 chr2L_1415001 RAL-307_75b 4 chr2L 1508051 1508247 chr2L 1508134 1508334 4 86 1.5 1.5 1.5 1.6 283 chr2L 1508051 intergenic not near genes chr2L 1508192 intergenic not near genes chr2L 1508334 intergenic not near genes chr2L_4_1505001 chr2L_1505001 RAL-307_75b 5 chr2L 1687026 1687061 chr2L 1687104 1687139 5 78 1.5 2.0 1.8 1.8 113 chr2L 1687026 intron chinmo + chr2L 1687082 intron chinmo + chr2L 1687139 intron chinmo + chr2L_5_1685001 chr2L_1685001 RAL-307_75b 6 chr2L 2097709 2097729 chr2L 2097879 2097899 5 170 0.0 0.0 0.0 5.0 190 chr2L 2097709 intron dpr3 - chr2L 2097804 intron dpr3 - chr2L 2097899 intron dpr3 - chr2L_5_2095001 chr2L_2095001 RAL-307_75b 7 chr2L 2450580 2450607 chr2L 2450657 2450684 6 77 0.0 0.5 0.2 5.0 104 chr2L 2450580 intron dpp + chr2L 2450632 intron dpp + chr2L 2450684 intron dpp + chr2L_6_2450001 chr2L_2450001 RAL-307_75b 8 chr2L 2547962 2547976 chr2L 2549170 2549184 5 1208 3.5 5.5 4.5 0.9 1222 chr2L 2547962 intergenic not near genes chr2L 2548573 intergenic not near genes chr2L 2549184 intergenic not near genes chr2L_5_2545001 chr2L_2545001 RAL-307_75b 9 chr2L 2661216 2661232 chr2L 2663053 2663070 I-element 5 1838 0.0 1.5 0.8 2.8 1854 chr2L 2661216 intergenic not near genes chr2L 2662143 intergenic not near genes chr2L 2663070 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-307_75b 10 chr2L 2891624 2891627 chr2L 2891755 2891758 4 131 1.0 1.5 1.2 1.8 134 chr2L 2891624 intron lilli + chr2L 2891691 intron lilli + chr2L 2891758 intron lilli + chr2L_4_2890001 chr2L_2890001 RAL-307_75b 11 chr2L 3186474 3186484 chr2L 3186560 3186569 4 85 2.0 1.0 1.5 1.6 95 chr2L 3186474 intron CG34393 - chr2L 3186522 intron CG34393 - chr2L 3186569 intron CG34393 - chr2L_4_3185001 chr2L_3185001 RAL-307_75b 12 chr2L 3291245 3291260 chr2L 3291325 3291340 4 80 3.0 2.0 2.5 1.1 95 chr2L 3291245 3` UTR CG9664 - chr2L 3291292 3` UTR CG9664 - chr2L 3291340 3` UTR CG9664 - chr2L_4_3290001 chr2L_3290001 RAL-307_75b 13 chr2L 3649787 3649813 chr2L 3654990 3655016 copia 4 5203 1.5 0.0 0.8 2.2 5229 chr2L 3649787 intron for - chr2L 3652402 intron for - chr2L 3655016 intron for - chr2L_4_3650001 chr2L_3650001 RAL-307_75b 14 chr2L 3815188 3815191 chr2L 3815266 3815269 4 77 1.0 0.0 0.5 2.7 81 chr2L 3815188 intergenic CR44076 + chr2L 3815228 intergenic CR44076 + chr2L 3815269 intergenic CR44076 + chr2L_4_3815001 chr2L_3815001 RAL-307_75b 15 chr2L 4026282 4026305 chr2L 4026416 4026441 5 133 0.0 0.0 0.0 5.0 159 chr2L 4026282 intergenic not near genes chr2L 4026362 intergenic not near genes chr2L 4026441 intergenic not near genes chr2L_5_4025001 chr2L_4025001 RAL-307_75b 16 chr2L 4231767 4231779 chr2L 4232066 4232078 4 299 0.0 1.5 0.8 2.2 311 chr2L 4231767 intergenic not near genes chr2L 4231922 intergenic not near genes chr2L 4232078 intergenic not near genes chr2L_4_4230001 chr2L_4230001 RAL-307_75b 17 chr2L 4419608 4419631 chr2L 4419831 4419854 6 223 0.0 1.0 0.5 4.0 246 chr2L 4419608 intron CG15431 - chr2L 4419731 intron CG15431 - chr2L 4419854 intron CG15431 - chr2L_6_4415001 chr2L_4415001 RAL-307_75b 18 chr2L 5667669 5667686 chr2L 5667746 5667763 5 77 2.5 2.0 2.2 1.6 94 chr2L 5667669 intron Hsp60C + chr2L 5667716 intron Hsp60C + chr2L 5667763 intron Hsp60C + chr2L_5_5665001 chr2L_5665001 RAL-307_75b 19 chr2L 5749901 5749916 chr2L 5749980 5749995 5 79 0.0 0.5 0.2 4.2 94 chr2L 5749901 intron CG11030 + chr2L 5749948 intron CG11030 + chr2L 5749995 intron CG11030 + chr2L_5_5745001 chr2L_5745001 RAL-307_75b 20 chr2L 5962274 5962294 chr2L 5962350 5962370 5 76 0.5 0.0 0.2 4.2 96 chr2L 5962274 intergenic not near genes chr2L 5962322 intergenic not near genes chr2L 5962370 intergenic not near genes chr2L_5_5960001 chr2L_5960001 RAL-307_75b 21 chr2L 6876779 6876799 chr2L 6882970 6882990 diver 7 6191 1.0 1.5 1.2 3.2 6211 chr2L 6876779 intron Nlg2 + chr2L 6879884 intron Nlg2 + chr2L 6882990 intron Nlg2 + chr2L_7_6875001 chr2L_6875001 RAL-307_75b 22 chr2L 7343328 7343350 chr2L 7350444 7350466 roo 4 7116 0.0 1.0 0.5 2.7 7138 chr2L 7343328 intron Wnt6 + chr2L 7346897 intron Wnt6 + chr2L 7350466 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-307_75b 23 chr2L 7502747 7502761 chr2L 7502821 7502836 5 75 1.5 0.5 1.0 2.5 89 chr2L 7502747 intron RapGAP1 - chr2L 7502792 intron RapGAP1 - chr2L 7502836 intron RapGAP1 - chr2L_5_7500001 chr2L_7500001 RAL-307_75b 24 chr2L 8701552 8701566 chr2L 8701629 8701643 6 77 1.0 0.5 0.8 3.3 91 chr2L 8701552 intron Hnf4 - chr2L 8701598 intron Hnf4 - chr2L 8701643 intron Hnf4 - chr2L_6_8700001 chr2L_8700001 RAL-307_75b 25 chr2L 8723116 8723148 chr2L 8731493 8731525 Tirant 5 8377 1.0 1.5 1.2 2.3 8409 chr2L 8723116 intron raw - chr2L 8727320 intron raw - chr2L 8731525 intron raw - chr2L_5_8725001 chr2L_8725001 RAL-307_75b 26 chr2L 9264366 9264373 chr2L 9264466 9264472 6 100 0.0 1.5 0.8 3.3 106 chr2L 9264366 intron Ggamma30A + chr2L 9264419 intron Ggamma30A + chr2L 9264472 intron Ggamma30A + chr2L_6_9260001 chr2L_9260001 RAL-307_75b 27 chr2L 9297377 9297384 chr2L 9297454 9297461 4 77 1.0 0.5 0.8 2.2 84 chr2L 9297377 3` UTR Ggamma30A + chr2L 9297419 3` UTR Ggamma30A + chr2L 9297461 3` UTR Ggamma30A + chr2L_4_9295001 chr2L_9295001 RAL-307_75b 28 chr2L 9335020 9335029 chr2L 9335099 9335108 4 79 1.0 0.0 0.5 2.7 88 chr2L 9335020 intron Eaat1 + chr2L 9335064 intron Eaat1 + chr2L 9335108 intron Eaat1 + chr2L_4_9335001 chr2L_9335001 RAL-307_75b 29 chr2L 9357262 9357279 chr2L 9357343 9357360 5 81 0.0 0.0 0.0 5.0 98 chr2L 9357262 intergenic not near genes chr2L 9357311 intergenic not near genes chr2L 9357360 intergenic not near genes chr2L_5_9355001 chr2L_9355001 RAL-307_75b 30 chr2L 9393497 9393530 chr2L 9396464 9396497 jockey 7 2967 0.0 1.5 0.8 3.9 3000 chr2L 9393497 intron Shawl - chr2L 9394997 intron Shawl - chr2L 9396497 intron Shawl - chr2L_7_9390001 chr2L_9390001 RAL-307_75b 31 chr2L 9658519 9658539 chr2L 9658911 9658931 5 391 0.5 1.5 1.0 2.5 412 chr2L 9658519 intergenic not near genes chr2L 9658725 intergenic not near genes chr2L 9658931 intergenic not near genes chr2L_5_9655001 chr2L_9655001 RAL-307_75b 32 chr2L 9738475 9738495 chr2L 9738571 9738591 6 96 0.0 0.5 0.2 5.0 116 chr2L 9738475 intron Nckx30C - chr2L 9738533 intron Nckx30C - chr2L 9738591 intron Nckx30C - chr2L_6_9735001 chr2L_9735001 RAL-307_75b 33 chr2L 9973736 9973742 chr2L 9980854 9980860 HMS-Beagle 7 7119 1.0 0.5 0.8 3.9 7124 chr2L 9973736 intergenic not near genes chr2L 9977298 intergenic not near genes chr2L 9980860 intergenic not near genes chr2L_7_9975001 chr2L_9975001 RAL-307_75b 34 chr2L 10105279 10105315 chr2L 10105355 10105391 5 76 0.5 0.0 0.2 4.2 112 chr2L 10105279 intron,intron CG44153 -,CG34109 + chr2L 10105335 intron,intron CG44153 -,CG34109 + chr2L 10105391 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-307_75b 35 chr2L 10385619 10385653 chr2L 10385699 10385731 5 80 1.5 1.0 1.2 2.3 112 chr2L 10385619 exon cdc2 - chr2L 10385675 intron cdc2 - chr2L 10385731 intron cdc2 - chr2L_5_10385001 chr2L_10385001 RAL-307_75b 36 chr2L 10490276 10490298 chr2L 10490358 10490380 4 82 0.5 0.0 0.2 3.3 104 chr2L 10490276 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490328 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490380 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_4_10490001 chr2L_10490001 RAL-307_75b 37 chr2L 10558800 10558811 chr2L 10558876 10558887 4 76 0.0 0.0 0.0 4.0 87 chr2L 10558800 intron Trim9 + chr2L 10558844 intron Trim9 + chr2L 10558887 intron Trim9 + chr2L_4_10555001 chr2L_10555001 RAL-307_75b 38 chr2L 10580794 10580822 chr2L 10580875 10580903 7 81 1.0 0.5 0.8 3.9 109 chr2L 10580794 intron Trim9 + chr2L 10580848 intron Trim9 + chr2L 10580903 intron Trim9 + chr2L_7_10580001 chr2L_10580001 RAL-307_75b 39 chr2L 11450152 11450156 chr2L 11450234 11450238 4 82 0.0 0.5 0.2 3.3 86 chr2L 11450152 intergenic not near genes chr2L 11450195 intergenic not near genes chr2L 11450238 intergenic not near genes chr2L_4_11450001 chr2L_11450001 RAL-307_75b 40 chr2L 11491129 11491148 chr2L 11491210 11491229 4 81 0.0 0.5 0.2 3.3 100 chr2L 11491129 intergenic not near genes chr2L 11491179 intergenic not near genes chr2L 11491229 intergenic not near genes chr2L_4_11490001 chr2L_11490001 RAL-307_75b 41 chr2L 11537767 11537782 chr2L 11537884 11537899 4 117 1.0 0.0 0.5 2.7 132 chr2L 11537767 intergenic not near genes chr2L 11537833 intergenic not near genes chr2L 11537899 intergenic not near genes chr2L_4_11535001 chr2L_11535001 RAL-307_75b 42 chr2L 11614053 11614078 chr2L 11615548 11615571 hopper2 5 1495 1.5 1.0 1.2 2.3 1518 chr2L 11614053 intron kek2 + chr2L 11614812 intron kek2 + chr2L 11615571 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-307_75b 43 chr2L 11713511 11713536 chr2L 11720979 11721004 blood 5 7468 1.0 1.5 1.2 2.3 7493 chr2L 11713511 intergenic not near genes chr2L 11717258 intergenic not near genes chr2L 11721004 intergenic CR44143 + chr2L_5_11715001 chr2L_11715001 RAL-307_75b 44 chr2L 12495707 12495731 chr2L 12495789 12495813 5 81 0.0 1.0 0.5 3.3 106 chr2L 12495707 intron bun - chr2L 12495760 intron bun - chr2L 12495813 intron bun - chr2L_5_12495001 chr2L_12495001 RAL-307_75b 45 chr2L 12933849 12933880 chr2L 12941315 12941347 blood 8 7467 1.0 0.5 0.8 4.4 7498 chr2L 12933849 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941347 intergenic not near genes chr2L_8_12935001 chr2L_12935001 RAL-307_75b 46 chr2L 12989051 12989072 chr2L 12989139 12989159 4 88 0.0 1.0 0.5 2.7 108 chr2L 12989051 intergenic not near genes chr2L 12989105 intergenic not near genes chr2L 12989159 intergenic not near genes chr2L_4_12985001 chr2L_12985001 RAL-307_75b 47 chr2L 13036247 13036266 chr2L 13036489 13036508 X-element 5 242 0.0 1.0 0.5 3.3 261 chr2L 13036247 intron CG9932 - chr2L 13036378 intron CG9932 - chr2L 13036508 intron CG9932 - chr2L_5_13035001 chr2L_13035001 RAL-307_75b 48 chr2L 13680794 13680809 chr2L 13680938 13680954 4 145 0.5 1.5 1.0 2.0 160 chr2L 13680794 intron CG31814 - chr2L 13680874 intron CG31814 - chr2L 13680954 intron CG31814 - chr2L_4_13680001 chr2L_13680001 RAL-307_75b 49 chr2L 14707209 14707236 chr2L 14707328 14707354 9 119 2.0 1.0 1.5 3.6 145 chr2L 14707209 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707354 intergenic not near genes chr2L_9_14705001 chr2L_14705001 RAL-307_75b 50 chr2L 14707591 14707620 chr2L 14708596 14708625 4 1005 1.5 6.0 3.8 0.8 1034 chr2L 14707591 intergenic not near genes chr2L 14708108 intergenic not near genes chr2L 14708625 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-307_75b 51 chr2L 14982144 14982281 chr2L 14982251 14982367 4 96 0.0 0.0 0.0 4.0 223 chr2L 14982144 intron mol - chr2L 14982256 intron mol - chr2L 14982367 intron mol - chr2L_4_14980001 chr2L_14980001 RAL-307_75b 52 chr2L 15514320 15514333 chr2L 15514404 15514417 4 84 2.5 3.5 3.0 1.0 97 chr2L 15514320 intergenic not near genes chr2L 15514368 intergenic not near genes chr2L 15514417 intergenic not near genes chr2L_4_15510001 chr2L_15510001 RAL-307_75b 53 chr2L 15956025 15956040 chr2L 15957492 15957507 hobo 5 1467 0.0 0.5 0.2 4.2 1482 chr2L 15956025 intron beat-Ib - chr2L 15956766 intron beat-Ib - chr2L 15957507 intron beat-Ib - chr2L_5_15955001 chr2L_15955001 RAL-307_75b 54 chr2L 16001477 16001492 chr2L 16001565 16001580 4 88 0.0 1.0 0.5 2.7 103 chr2L 16001477 intron beat-Ic + chr2L 16001528 intron beat-Ic + chr2L 16001580 intron beat-Ic + chr2L_4_16000001 chr2L_16000001 RAL-307_75b 55 chr2L 16141164 16141173 chr2L 16146370 16146380 copia 4 5207 2.0 0.0 1.0 2.0 5216 chr2L 16141164 intergenic not near genes chr2L 16143772 intergenic not near genes chr2L 16146380 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-307_75b 56 chr2L 16254899 16254904 chr2L 16255158 16255163 4 259 0.5 1.0 0.8 2.2 264 chr2L 16254899 intron PRL-1 - chr2L 16255031 intron PRL-1 - chr2L 16255163 intron PRL-1 - chr2L_4_16255001 chr2L_16255001 RAL-307_75b 57 chr2L 16384495 16384515 chr2L 16384580 16384604 4 88 2.0 0.0 1.0 2.0 109 chr2L 16384495 intergenic not near genes chr2L 16384550 intergenic not near genes chr2L 16384604 intergenic not near genes chr2L_4_16380001 chr2L_16380001 RAL-307_75b 58 chr2L 1812331 1812331 chr2L 16889878 16889881 4 15077548 2.0 2.5 2.2 1.2 15077550 chr2L 1812331 intergenic not near genes chr2L 9351106 intergenic CG13110 + chr2L 16889881 intron tweek + chr2L_4_9350001 chr2L_9350001 RAL-307_75b 59 chr2L 17050017 17050028 chr2L 17050103 17050115 4 87 0.5 0.5 0.5 2.7 98 chr2L 17050017 intergenic not near genes chr2L 17050066 intergenic not near genes chr2L 17050115 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-307_75b 60 chr2L 17087381 17087401 chr2L 17087499 17087519 4 118 0.5 0.5 0.5 2.7 138 chr2L 17087381 intergenic CG12620 + chr2L 17087450 intergenic CG12620 + chr2L 17087519 intergenic CG12620 + chr2L_4_17085001 chr2L_17085001 RAL-307_75b 61 chr2L 17101023 17101045 chr2L 17101552 17101574 5 529 1.5 2.5 2.0 1.7 551 chr2L 17101023 intergenic not near genes chr2L 17101298 intergenic not near genes chr2L 17101574 intergenic not near genes chr2L_5_17100001 chr2L_17100001 RAL-307_75b 62 chr2L 17238835 17238860 chr2L 17238920 17238945 5 85 0.5 1.0 0.8 2.8 110 chr2L 17238835 intron beat-IIIc - chr2L 17238890 intron beat-IIIc - chr2L 17238945 intron beat-IIIc - chr2L_5_17235001 chr2L_17235001 RAL-307_75b 63 chr2L 17579892 17579919 chr2L 17579970 17579997 4 78 0.0 0.0 0.0 4.0 105 chr2L 17579892 5` UTR CR45698 + chr2L 17579944 5` UTR CR45698 + chr2L 17579997 5` UTR CR45698 + chr2L_4_17575001 chr2L_17575001 RAL-307_75b 64 chr2L 17727874 17727878 chr2L 17729341 17729344 hobo 4 1467 2.0 4.0 3.0 1.0 1470 chr2L 17727874 intron CadN - chr2L 17728609 intron CadN - chr2L 17729344 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-307_75b 65 chr2L 17819920 17819949 chr2L 17825123 17825151 copia 9 5203 0.5 0.5 0.5 6.0 5231 chr2L 17819920 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825151 intron CadN2 - chr2L_9_17820001 chr2L_17820001 RAL-307_75b 66 chr2L 17880010 17880013 chr2L 17880097 17880099 4 87 0.0 0.5 0.2 3.3 89 chr2L 17880010 intergenic not near genes chr2L 17880054 intergenic not near genes chr2L 17880099 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-307_75b 67 chr2L 17944433 17944451 chr2L 17944596 17944614 5 163 2.5 2.0 2.2 1.6 181 chr2L 17944433 intergenic not near genes chr2L 17944524 intergenic not near genes chr2L 17944614 intergenic not near genes chr2L_5_17940001 chr2L_17940001 RAL-307_75b 68 chr2L 18899226 18899242 chr2L 18899603 18899619 4 377 0.5 0.5 0.5 2.7 393 chr2L 18899226 intergenic CR44739 - chr2L 18899422 intergenic CR44739 - chr2L 18899619 3` UTR CR44739 - chr2L_4_18895001 chr2L_18895001 RAL-307_75b 69 chr2L 18962255 18962260 chr2L 18962350 18962353 4 94 0.0 2.0 1.0 2.0 98 chr2L 18962255 intron Nak - chr2L 18962304 intron Nak - chr2L 18962353 intron Nak - chr2L_4_18960001 chr2L_18960001 RAL-307_75b 70 chr2L 19121039 19121052 chr2L 19121117 19121130 6 78 1.0 0.0 0.5 4.0 91 chr2L 19121039 intergenic l(2)37Cc - chr2L 19121084 intergenic l(2)37Cc - chr2L 19121130 intergenic l(2)37Cc - chr2L_6_19120001 chr2L_19120001 RAL-307_75b 71 chr2L 19331680 19331695 chr2L 19331757 19331774 4 78 1.0 3.5 2.2 1.2 94 chr2L 19331680 intergenic not near genes chr2L 19331727 intergenic not near genes chr2L 19331774 intergenic not near genes chr2L_4_19330001 chr2L_19330001 RAL-307_75b 72 chr2L 19345012 19345046 chr2L 19357221 19357252 blood 9 12209 1.0 1.0 1.0 4.5 12240 chr2L 19345012 intron dnt - chr2L 19351132 intron dnt - chr2L 19357252 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-307_75b 73 chr2L 19560838 19560859 chr2L 19560918 19560939 4 80 1.0 0.0 0.5 2.7 101 chr2L 19560838 intron Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560939 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-307_75b 74 chr2L 19561348 19561353 chr2L 19561489 19561493 4 140 1.5 0.0 0.8 2.2 145 chr2L 19561348 exon Tep5 + chr2L 19561420 exon Tep5 + chr2L 19561493 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-307_75b 75 chr2L 19644123 19644142 chr2L 19644199 19644218 5 76 1.0 1.5 1.2 2.3 95 chr2L 19644123 intron Lar + chr2L 19644170 intron Lar + chr2L 19644218 intron Lar + chr2L_5_19640001 chr2L_19640001 RAL-307_75b 76 chr2L 19652569 19652588 chr2L 19674005 19674024 opus 4 21436 2.0 0.0 1.0 2.0 21455 chr2L 19652569 intron Lar + chr2L 19663296 intron Lar + chr2L 19674024 intron Lar + chr2L_4_19660001 chr2L_19660001 RAL-307_75b 77 chr2L 19703547 19703563 chr2L 19712683 19712699 roo 4 9136 0.5 1.5 1.0 2.0 9152 chr2L 19703547 intron Lar + chr2L 19708123 intron Lar + chr2L 19712699 intron Lar + chr2L_4_19705001 chr2L_19705001 RAL-307_75b 78 chr2L 19762807 19762832 chr2L 19763049 19763074 pogo 4 241 0.0 0.0 0.0 4.0 267 chr2L 19762807 5` UTR fbp - chr2L 19762940 intron fbp - chr2L 19763074 intron fbp - chr2L_4_19760001 chr2L_19760001 RAL-307_75b 79 chr2L 19994668 19994680 chr2L 19994748 19994760 7 80 0.5 4.0 2.2 2.2 92 chr2L 19994668 intron CG43861 - chr2L 19994714 intron CG43861 - chr2L 19994760 intron CG43861 - chr2L_7_19990001 chr2L_19990001 RAL-307_75b 80 chr2L 20296510 20296537 chr2L 20296591 20296618 5 81 0.0 1.0 0.5 3.3 108 chr2L 20296510 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296618 intergenic CR43414 - chr2L_5_20295001 chr2L_20295001 RAL-307_75b 81 chr2L 20303166 20303194 chr2L 20310634 20310661 blood 4 7468 0.5 1.0 0.8 2.2 7495 chr2L 20303166 intergenic not near genes chr2L 20306914 intergenic not near genes chr2L 20310661 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-307_75b 82 chr2L 20572965 20572995 chr2L 20573050 20573080 4 85 1.0 0.0 0.5 2.7 115 chr2L 20572965 intron CR45347 + chr2L 20573022 intron CR45347 + chr2L 20573080 intron CR45347 + chr2L_4_20570001 chr2L_20570001 RAL-307_75b 83 chr2L 20818526 20818526 chr2L 20818604 20818607 4 80 2.5 3.5 3.0 1.0 81 chr2L 20818526 exon CheB38a - chr2L 20818566 intergenic CheB38a - chr2L 20818607 intergenic CheB38a - chr2L_4_20815001 chr2L_20815001 RAL-307_75b 84 chr2L 21035414 21035415 chr2L 21035523 21035523 4 109 0.5 2.0 1.2 1.8 109 chr2L 21035414 intron CG42238 - chr2L 21035468 intron CG42238 - chr2L 21035523 intron CG42238 - chr2L_4_21035001 chr2L_21035001 RAL-307_75b 85 chr2L 21110647 21110667 chr2L 21110732 21110752 4 84 1.5 1.0 1.2 1.8 105 chr2L 21110647 intron Nhe2 + chr2L 21110700 intron Nhe2 + chr2L 21110752 intron Nhe2 + chr2L_4_21110001 chr2L_21110001 RAL-307_75b 86 chr2L 21755500 21755504 chr2L 21755624 21755628 4 124 1.0 0.0 0.5 2.7 128 chr2L 21755500 intron step - chr2L 21755564 intron step - chr2L 21755628 intron step - chr2L_4_21755001 chr2L_21755001 RAL-307_75b 87 chr2L 21934568 21934597 chr2L 21934691 21934720 7 123 0.5 0.0 0.2 5.8 152 chr2L 21934568 intergenic not near genes chr2L 21934644 intergenic not near genes chr2L 21934720 intergenic not near genes chr2L_7_21930001 chr2L_21930001 RAL-307_75b 88 chr2L 22581974 22581991 chr2L 22583763 22583780 S-element 4 1789 0.5 1.0 0.8 2.2 1806 chr2L 22581974 intron CG17494 + chr2L 22582877 intron CG17494 + chr2L 22583780 intron CG17494 + chr2L_4_22580001 chr2L_22580001 RAL-307_75b 89 chr2R 1365868 1365895 chr2R 1365980 1366007 10 112 1.0 1.0 1.0 5.0 139 chr2R 1365868 intron l(2)41Ab + chr2R 1365938 intron l(2)41Ab + chr2R 1366007 intron l(2)41Ab + chr2R_10_1365001 chr2R_1365001 RAL-307_75b 90 chr2R 5237357 5237372 chr2R 5237439 5237454 4 82 1.5 0.0 0.8 2.2 97 chr2R 5237357 intron Nipped-A - chr2R 5237406 intron Nipped-A - chr2R 5237454 intron Nipped-A - chr2R_4_5235001 chr2R_5235001 RAL-307_75b 91 chr2R 5869287 5869309 chr2R 5874363 5874385 flea 4 5076 0.0 2.0 1.0 2.0 5098 chr2R 5869287 intergenic not near genes chr2R 5871836 intergenic not near genes chr2R 5874385 intergenic not near genes chr2R_4_5870001 chr2R_5870001 RAL-307_75b 92 chr2R 5932821 5932827 chr2R 5932900 5932906 4 79 0.5 2.5 1.5 1.6 85 chr2R 5932821 intergenic not near genes chr2R 5932864 intergenic not near genes chr2R 5932906 intergenic not near genes chr2R_4_5930001 chr2R_5930001 RAL-307_75b 93 chr2R 6168208 6168223 chr2R 6168290 6168305 4 82 0.5 0.5 0.5 2.7 97 chr2R 6168208 intron EcR - chr2R 6168256 intron EcR - chr2R 6168305 intron EcR - chr2R_4_6165001 chr2R_6165001 RAL-307_75b 94 chr2R 6588104 6588143 chr2R 6591116 6591155 6 3012 9.0 8.5 8.8 0.6 3051 chr2R 6588104 intron jing + chr2R 6589630 intron jing + chr2R 6591155 intron jing + chr2R_6_6585001 chr2R_6585001 RAL-307_75b 95 chr2R 6699594 6699604 chr2R 6699679 6699689 4 85 1.0 2.0 1.5 1.6 95 chr2R 6699594 intergenic Rab2 + chr2R 6699642 intergenic Rab2 + chr2R 6699689 intergenic Rab2 + chr2R_4_6695001 chr2R_6695001 RAL-307_75b 96 chr2R 7642879 7642886 chr2R 7642958 7642965 5 79 1.0 1.0 1.0 2.5 86 chr2R 7642879 intron CG43340 + chr2R 7642922 intron CG43340 + chr2R 7642965 intron CG43340 + chr2R_5_7640001 chr2R_7640001 RAL-307_75b 97 chr2R 7869190 7869214 chr2R 7873976 7873999 Doc 4 4786 1.5 0.5 1.0 2.0 4809 chr2R 7869190 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7873999 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-307_75b 98 chr2R 8193816 8193838 chr2R 8193900 8193923 5 84 1.5 1.0 1.2 2.3 107 chr2R 8193816 intron LRP1 + chr2R 8193870 intron LRP1 + chr2R 8193923 intron LRP1 + chr2R_5_8190001 chr2R_8190001 RAL-307_75b 99 chr2R 8249563 8249592 chr2R 8249645 8249674 5 82 1.0 0.0 0.5 3.3 111 chr2R 8249563 5` UTR CG44439 - chr2R 8249618 intergenic CG44439 - chr2R 8249674 intergenic CG44439 - chr2R_5_8245001 chr2R_8245001 RAL-307_75b 100 chr2R 8489728 8489740 chr2R 8489807 8489819 7 78 1.5 1.0 1.2 3.2 91 chr2R 8489728 intron mtt - chr2R 8489774 intron mtt - chr2R 8489819 intron mtt - chr2R_7_8485001 chr2R_8485001 RAL-307_75b 101 chr2R 8635908 8635926 chr2R 8635986 8636004 4 78 0.0 0.5 0.2 3.3 96 chr2R 8635908 intergenic not near genes chr2R 8635956 intergenic not near genes chr2R 8636004 intergenic not near genes chr2R_4_8635001 chr2R_8635001 RAL-307_75b 102 chr2R 8722772 8722794 chr2R 8723013 8723035 pogo 5 241 0.5 1.0 0.8 2.8 263 chr2R 8722772 intron CG14767 - chr2R 8722904 intron CG14767 - chr2R 8723035 intron CG14767 - chr2R_5_8720001 chr2R_8720001 RAL-307_75b 103 chr2R 8799264 8799281 chr2R 8799416 8799433 4 151 0.0 2.0 1.0 2.0 169 chr2R 8799264 intron sns + chr2R 8799348 intron sns + chr2R 8799433 intron sns + chr2R_4_8795001 chr2R_8795001 RAL-307_75b 104 chr2R 8960463 8960474 chr2R 8960615 8960626 4 152 1.5 0.5 1.0 2.0 163 chr2R 8960463 3` UTR babo + chr2R 8960544 3` UTR babo + chr2R 8960626 3` UTR babo + chr2R_4_8960001 chr2R_8960001 RAL-307_75b 105 chr2R 8969811 8969818 chr2R 8969904 8969911 5 93 1.0 0.5 0.8 2.8 100 chr2R 8969811 3` UTR CG8213 - chr2R 8969861 3` UTR CG8213 - chr2R 8969911 3` UTR CG8213 - chr2R_5_8965001 chr2R_8965001 RAL-307_75b 106 chr2R 8976614 8976635 chr2R 8976693 8976714 6 79 0.5 1.0 0.8 3.3 100 chr2R 8976614 intron CG8213 - chr2R 8976664 intron CG8213 - chr2R 8976714 intron CG8213 - chr2R_6_8975001 chr2R_8975001 RAL-307_75b 107 chr2R 9052714 9052736 chr2R 9052795 9052817 4 81 0.0 0.5 0.2 3.3 103 chr2R 9052714 intron CG13743 - chr2R 9052766 intron CG13743 - chr2R 9052817 intron CG13743 - chr2R_4_9050001 chr2R_9050001 RAL-307_75b 108 chr2R 9510683 9510697 chr2R 9510799 9510813 4 116 0.0 2.0 1.0 2.0 130 chr2R 9510683 intron brp + chr2R 9510748 intron brp + chr2R 9510813 intron brp + chr2R_4_9510001 chr2R_9510001 RAL-307_75b 109 chr2R 10197389 10197409 chr2R 10197475 10197495 5 86 3.0 1.5 2.2 1.6 106 chr2R 10197389 3` UTR CG34221 - chr2R 10197442 3` UTR CG34221 - chr2R 10197495 3` UTR CG34221 - chr2R_5_10195001 chr2R_10195001 RAL-307_75b 110 chr2R 10221235 10221241 chr2R 10221342 10221348 4 107 0.0 2.0 1.0 2.0 113 chr2R 10221235 intron,intron CG12912 -,Hr46 - chr2R 10221292 intron,intron CG12912 -,Hr46 - chr2R 10221348 intron,intron CG12912 -,Hr46 - chr2R_4_10220001 chr2R_10220001 RAL-307_75b 111 chr2R 10313316 10313349 chr2R 10313404 10313437 4 88 0.5 0.0 0.2 3.3 121 chr2R 10313316 intergenic not near genes chr2R 10313376 intergenic not near genes chr2R 10313437 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-307_75b 112 chr2R 10352687 10352702 chr2R 10352764 10352779 6 77 0.5 0.5 0.5 4.0 92 chr2R 10352687 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352733 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352779 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_6_10350001 chr2R_10350001 RAL-307_75b 113 chr2R 10582121 10582124 chr2R 10582216 10582219 4 95 1.0 0.0 0.5 2.7 98 chr2R 10582121 intron psq + chr2R 10582170 intron psq + chr2R 10582219 intron psq + chr2R_4_10580001 chr2R_10580001 RAL-307_75b 114 chr2R 10758794 10758826 chr2R 10758893 10758925 5 99 1.5 2.5 2.0 1.7 131 chr2R 10758794 intron CG33144 - chr2R 10758860 intron CG33144 - chr2R 10758925 intron CG33144 - chr2R_5_10755001 chr2R_10755001 RAL-307_75b 115 chr2R 10911941 10911953 chr2R 10912026 10912039 4 86 1.5 0.5 1.0 2.0 98 chr2R 10911941 intergenic not near genes chr2R 10911990 intergenic not near genes chr2R 10912039 intergenic not near genes chr2R_4_10910001 chr2R_10910001 RAL-307_75b 116 chr2R 10948055 10948057 chr2R 10955606 10955608 17.6 4 7551 0.0 1.5 0.8 2.2 7553 chr2R 10948055 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955608 intergenic not near genes chr2R_4_10950001 chr2R_10950001 RAL-307_75b 117 chr2R 11097359 11097377 chr2R 11097464 11097481 7 105 1.0 0.0 0.5 4.7 122 chr2R 11097359 intron luna - chr2R 11097420 intron luna - chr2R 11097481 intron luna - chr2R_7_11095001 chr2R_11095001 RAL-307_75b 118 chr2R 11494598 11494614 chr2R 11494687 11494703 5 89 0.0 0.0 0.0 5.0 105 chr2R 11494598 intron inv + chr2R 11494650 intron inv + chr2R 11494703 intron inv + chr2R_5_11490001 chr2R_11490001 RAL-307_75b 119 chr2R 11547129 11547145 chr2R 11547762 11547778 5 633 0.5 3.0 1.8 1.8 649 chr2R 11547129 intergenic not near genes chr2R 11547454 intergenic not near genes chr2R 11547778 intergenic not near genes chr2R_5_11545001 chr2R_11545001 RAL-307_75b 120 chr2R 11631402 11631410 chr2R 11631482 11631490 4 80 1.0 1.0 1.0 2.0 88 chr2R 11631402 intron CG9005 - chr2R 11631446 intron CG9005 - chr2R 11631490 intron CG9005 - chr2R_4_11630001 chr2R_11630001 RAL-307_75b 121 chr2R 12186000 12186035 chr2R 12186095 12186130 5 95 1.0 3.0 2.0 1.7 130 chr2R 12186000 intron Cyp6g1 + chr2R 12186065 intron Cyp6g1 + chr2R 12186130 intron Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-307_75b 122 chr2R 12187472 12187508 chr2R 12190089 12190124 8 2617 23.5 14.0 18.8 0.4 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_8_12185001 chr2R_12185001 RAL-307_75b 123 chr2R 12210147 12210162 chr2R 12210228 12210243 5 81 0.0 1.5 0.8 2.8 96 chr2R 12210147 exon Sr-CII - chr2R 12210195 intron Sr-CII - chr2R 12210243 intron Sr-CII - chr2R_5_12210001 chr2R_12210001 RAL-307_75b 124 chr2R 12363384 12363392 chr2R 12363816 12363824 4 432 0.5 0.0 0.2 3.3 440 chr2R 12363384 intergenic CG30043 + chr2R 12363604 intergenic CG30043 + chr2R 12363824 intergenic not near genes chr2R_4_12360001 chr2R_12360001 RAL-307_75b 125 chr2R 13136841 13136855 chr2R 13141639 13141653 Doc 7 4798 2.5 0.0 1.2 3.2 4812 chr2R 13136841 exon Cap-G + chr2R 13139247 intron Cap-G + chr2R 13141653 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-307_75b 126 chr2R 13438873 13438885 chr2R 13440191 13440203 4 1318 0.5 11.5 6.0 0.6 1330 chr2R 13438873 5` UTR CG42321 - chr2R 13439538 3` UTR cnn - chr2R 13440203 exon cnn - chr2R_4_13435001 chr2R_13435001 RAL-307_75b 127 chr2R 13728140 13728162 chr2R 13735797 13735819 opus 4 7657 1.0 0.5 0.8 2.2 7679 chr2R 13728140 intron fas + chr2R 13731980 intron fas + chr2R 13735819 intron fas + chr2R_4_13730001 chr2R_13730001 RAL-307_75b 128 chr2R 13768981 13769010 chr2R 13769080 13769109 6 99 0.5 0.5 0.5 4.0 128 chr2R 13768981 intergenic not near genes chr2R 13769045 intergenic not near genes chr2R 13769109 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-307_75b 129 chr2R 14054066 14054084 chr2R 14054144 14054162 4 78 0.5 0.5 0.5 2.7 96 chr2R 14054066 intron mam + chr2R 14054114 intron mam + chr2R 14054162 intron mam + chr2R_4_14050001 chr2R_14050001 RAL-307_75b 130 chr2R 14565559 14565591 chr2R 14565636 14565668 5 77 0.5 1.0 0.8 2.8 109 chr2R 14565559 intron ttv + chr2R 14565614 intron ttv + chr2R 14565668 intron ttv + chr2R_5_14565001 chr2R_14565001 RAL-307_75b 131 chr2R 14917851 14917877 chr2R 14917936 14917962 7 85 0.5 0.0 0.2 5.8 111 chr2R 14917851 intron CG10249 - chr2R 14917906 intron CG10249 - chr2R 14917962 intron CG10249 - chr2R_7_14915001 chr2R_14915001 RAL-307_75b 132 chr2R 14922143 14922156 chr2R 14922219 14922231 4 75 1.0 0.5 0.8 2.2 88 chr2R 14922143 intron CG10249 - chr2R 14922187 intron CG10249 - chr2R 14922231 intron CG10249 - chr2R_4_14920001 chr2R_14920001 RAL-307_75b 133 chr2R 15004725 15004753 chr2R 15005054 15005082 jockey 4 329 0.0 0.0 0.0 4.0 357 chr2R 15004725 intergenic not near genes chr2R 15004904 intergenic not near genes chr2R 15005082 intergenic not near genes chr2R_4_15000001 chr2R_15000001 RAL-307_75b 134 chr2R 15119324 15119343 chr2R 15127805 15127824 Tirant 4 8481 1.0 1.0 1.0 2.0 8500 chr2R 15119324 intron chn + chr2R 15123574 intron chn + chr2R 15127824 intron chn + chr2R_4_15120001 chr2R_15120001 RAL-307_75b 135 chr2R 15749708 15749714 chr2R 15749785 15749791 5 77 2.0 1.5 1.8 1.8 83 chr2R 15749708 intron CG30089 + chr2R 15749750 intron CG30089 + chr2R 15749791 intron CG30089 + chr2R_5_15745001 chr2R_15745001 RAL-307_75b 136 chr2R 16380125 16380145 chr2R 16380223 16380243 5 98 2.5 1.0 1.8 1.8 118 chr2R 16380125 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380184 3` UTR CR45317 - chr2R 16380243 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_5_16380001 chr2R_16380001 RAL-307_75b 137 chr2R 16619972 16620004 chr2R 16620053 16620084 5 81 2.0 0.0 1.0 2.5 112 chr2R 16619972 intron CG5065 + chr2R 16620028 intron CG5065 + chr2R 16620084 intron CG5065 + chr2R_5_16620001 chr2R_16620001 RAL-307_75b 138 chr2R 17048619 17048654 chr2R 17048698 17048732 7 79 0.0 0.0 0.0 7.0 113 chr2R 17048619 3` UTR CG9642 + chr2R 17048676 3` UTR CG9642 + chr2R 17048732 3` UTR CG9642 + chr2R_7_17045001 chr2R_17045001 RAL-307_75b 139 chr2R 17500675 17500683 chr2R 17500751 17500759 4 76 0.0 0.0 0.0 4.0 84 chr2R 17500675 intergenic not near genes chr2R 17500717 intergenic not near genes chr2R 17500759 intergenic not near genes chr2R_4_17500001 chr2R_17500001 RAL-307_75b 140 chr2R 18408287 18408310 chr2R 18408408 18408431 9 121 0.0 0.0 0.0 9.0 144 chr2R 18408287 exon GstE8 + chr2R 18408359 exon GstE8 + chr2R 18408431 exon GstE8 + chr2R_9_18405001 chr2R_18405001 RAL-307_75b 141 chr2R 18435753 18435759 chr2R 18435838 18435844 4 84 1.0 0.5 0.8 2.2 91 chr2R 18435753 intron CG30118 - chr2R 18435798 intron CG30118 - chr2R 18435844 intron CG30118 - chr2R_4_18435001 chr2R_18435001 RAL-307_75b 142 chr2R 18513311 18513318 chr2R 18513392 18513400 4 82 1.0 0.0 0.5 2.7 89 chr2R 18513311 intergenic not near genes chr2R 18513356 intergenic not near genes chr2R 18513400 intergenic not near genes chr2R_4_18510001 chr2R_18510001 RAL-307_75b 143 chr2R 18726891 18727100 chr2R 18726974 18727273 9 143 0.5 0.0 0.2 7.5 382 chr2R 18726891 intron Hs3st-A + chr2R 18727082 intron Hs3st-A + chr2R 18727273 intron Hs3st-A + chr2R_9_18725001 chr2R_18725001 RAL-307_75b 144 chr2R 18953161 18953190 chr2R 18953248 18953277 5 87 1.0 0.5 0.8 2.8 116 chr2R 18953161 intron sano + chr2R 18953219 intron sano + chr2R 18953277 intron sano + chr2R_5_18950001 chr2R_18950001 RAL-307_75b 145 chr2R 19065459 19065478 chr2R 19066386 19066405 4 927 1.0 1.5 1.2 1.8 946 chr2R 19065459 intergenic not near genes chr2R 19065932 intergenic not near genes chr2R 19066405 intergenic not near genes chr2R_4_19065001 chr2R_19065001 RAL-307_75b 146 chr2R 19385108 19385143 chr2R 19385651 19385686 5 543 0.0 0.0 0.0 5.0 578 chr2R 19385108 intergenic CG10073 + chr2R 19385397 intergenic CG10073 + chr2R 19385686 intergenic CG10081 + chr2R_5_19385001 chr2R_19385001 RAL-307_75b 147 chr2R 19776600 19776623 chr2R 19779923 19779946 jockey 4 3323 1.5 0.0 0.8 2.2 3346 chr2R 19776600 intergenic not near genes chr2R 19778273 intergenic not near genes chr2R 19779946 intergenic not near genes chr2R_4_19775001 chr2R_19775001 RAL-307_75b 148 chr2R 19957435 19957445 chr2R 19962636 19962647 copia 4 5202 1.0 0.5 0.8 2.2 5212 chr2R 19957435 intergenic CG44623 + chr2R 19960041 intergenic not near genes chr2R 19962647 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-307_75b 149 chr2R 20179051 20179055 chr2R 20179128 20179132 4 78 0.5 1.5 1.0 2.0 81 chr2R 20179051 intergenic not near genes chr2R 20179092 intergenic not near genes chr2R 20179132 intergenic not near genes chr2R_4_20175001 chr2R_20175001 RAL-307_75b 150 chr2R 20223959 20223985 chr2R 20224044 20224070 5 85 0.0 1.5 0.8 2.8 111 chr2R 20223959 intergenic not near genes chr2R 20224014 intergenic not near genes chr2R 20224070 intergenic not near genes chr2R_5_20220001 chr2R_20220001 RAL-307_75b 151 chr2R 20601726 20601752 chr2R 20601811 20601836 4 85 0.0 0.0 0.0 4.0 110 chr2R 20601726 intron bl + chr2R 20601781 intron bl + chr2R 20601836 intron bl + chr2R_4_20600001 chr2R_20600001 RAL-307_75b 152 chr2R 20812248 20812268 chr2R 20812328 20812348 4 80 0.0 2.0 1.0 2.0 100 chr2R 20812248 intergenic not near genes chr2R 20812298 intergenic not near genes chr2R 20812348 intergenic not near genes chr2R_4_20810001 chr2R_20810001 RAL-307_75b 153 chr2R 21616071 21616095 chr2R 21617372 21617396 4 1301 1.5 5.0 3.2 1.0 1325 chr2R 21616071 exon CG18870 - chr2R 21616734 5` UTR CG18870 - chr2R 21617396 exon clt - chr2R_4_21615001 chr2R_21615001 RAL-307_75b 154 chr2R 21738279 21738311 chr2R 21747439 21747471 roo 6 9160 1.0 1.0 1.0 3.0 9192 chr2R 21738279 intergenic not near genes chr2R 21742875 intergenic not near genes chr2R 21747471 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-307_75b 155 chr2R 21753087 21753113 chr2R 21753571 21753598 roo 6 485 0.0 1.5 0.8 3.3 511 chr2R 21753087 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753598 intergenic not near genes chr2R_6_21750001 chr2R_21750001 RAL-307_75b 156 chr2R 21796463 21796484 chr2R 21796546 21796568 5 84 1.0 1.0 1.0 2.5 105 chr2R 21796463 5` UTR CG34204 + chr2R 21796516 5` UTR CG34204 + chr2R 21796568 exon CG34204 + chr2R_5_21795001 chr2R_21795001 RAL-307_75b 157 chr2R 21809532 21809550 chr2R 21817772 21817790 roo 9 8240 0.5 2.5 1.5 3.6 8258 chr2R 21809532 intergenic not near genes chr2R 21813661 intergenic not near genes chr2R 21817790 intergenic not near genes chr2R_9_21810001 chr2R_21810001 RAL-307_75b 158 chr2R 22035553 22035565 chr2R 22035640 22035652 4 87 0.0 1.0 0.5 2.7 99 chr2R 22035553 intron,3` UTR CG34370 -,CG9308 + chr2R 22035602 intron,3` UTR CG34370 -,CG9308 + chr2R 22035652 intron,3` UTR CG34370 -,CG9308 + chr2R_4_22035001 chr2R_22035001 RAL-307_75b 159 chr2R 22349701 22349711 chr2R 22351484 22351495 jockey 4 1784 1.0 1.0 1.0 2.0 1794 chr2R 22349701 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351495 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-307_75b 160 chr2R 22774972 22774997 chr2R 22775390 22775416 jockey 5 419 2.0 1.5 1.8 1.8 444 chr2R 22774972 intron CG42260 - chr2R 22775194 intron CG42260 - chr2R 22775416 intron CG42260 - chr2R_5_22775001 chr2R_22775001 RAL-307_75b 161 chr2R 22941825 22941853 chr2R 22941904 22941932 4 79 1.0 1.0 1.0 2.0 107 chr2R 22941825 intergenic CG42694 + chr2R 22941878 5` UTR CG42694 + chr2R 22941932 5` UTR CG42694 + chr2R_4_22940001 chr2R_22940001 RAL-307_75b 162 chr2R 23356280 23356295 chr2R 23356369 23356384 4 89 0.0 1.5 0.8 2.2 104 chr2R 23356280 3` UTR Rpi + chr2R 23356332 3` UTR Rpi + chr2R 23356384 3` UTR,3` UTR Rpi +,CG3500 - chr2R_4_23355001 chr2R_23355001 RAL-307_75b 163 chr2R 23607049 23607193 chr2R 23607130 23607285 5 88 0.0 0.0 0.0 5.0 236 chr2R 23607049 intron CG17664 - chr2R 23607167 intron CG17664 - chr2R 23607285 intron CG17664 - chr2R_5_23605001 chr2R_23605001 RAL-307_75b 164 chr2R 23886697 23886719 chr2R 23886785 23886807 4 88 2.0 0.5 1.2 1.8 110 chr2R 23886697 intergenic CG5597 + chr2R 23886752 intergenic CG5597 + chr2R 23886807 intergenic CG5597 + chr2R_4_23885001 chr2R_23885001 RAL-307_75b 165 chr2R 24349116 24349134 chr2R 24349194 24349212 5 78 1.0 3.5 2.2 1.6 96 chr2R 24349116 intron bs + chr2R 24349164 intron bs + chr2R 24349212 intron bs + chr2R_5_24345001 chr2R_24345001 RAL-307_75b 166 chr2R 24353434 24353451 chr2R 24361795 24361813 roo 4 8362 2.0 0.0 1.0 2.0 8379 chr2R 24353434 intron,intron bs +,CR44811 - chr2R 24357624 intron,intron bs +,CR44811 - chr2R 24361813 intron,intron bs +,CR44811 - chr2R_4_24355001 chr2R_24355001 RAL-307_75b 167 chr2R 24630741 24630752 chr2R 24630827 24630838 4 86 1.0 4.0 2.5 1.1 97 chr2R 24630741 intron CG13594 - chr2R 24630790 intron CG13594 - chr2R 24630838 intron CG13594 - chr2R_4_24630001 chr2R_24630001 RAL-307_75b 168 chr2R 24727894 24727917 chr2R 24735402 24735425 mdg1 4 7508 0.5 0.5 0.5 2.7 7531 chr2R 24727894 intron Mid1 - chr2R 24731660 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_4_24730001 chr2R_24730001 RAL-307_75b 169 chr2R 24763610 24763642 chr2R 24765585 24765618 G2 7 1976 1.5 0.5 1.0 3.5 2008 chr2R 24763610 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765618 exon CG3894 + chr2R_7_24760001 chr2R_24760001 RAL-307_75b 170 chr2R 24823816 24823832 chr2R 24823922 24823938 5 106 0.0 2.5 1.2 2.3 122 chr2R 24823816 intron Dll + chr2R 24823877 intron Dll + chr2R 24823938 intron Dll + chr2R_5_24820001 chr2R_24820001 RAL-307_75b 171 chr2R 25081611 25081639 chr2R 25082707 25082735 4 1096 0.0 4.0 2.0 1.3 1124 chr2R 25081611 intron gol - chr2R 25082173 intron gol - chr2R 25082735 intron gol - chr2R_4_25080001 chr2R_25080001 RAL-307_75b 172 chr2R 25101283 25101308 chr2R 25101385 25101410 5 102 0.0 0.5 0.2 4.2 127 chr2R 25101283 intron lov - chr2R 25101346 intron lov - chr2R 25101410 intron lov - chr2R_5_25100001 chr2R_25100001 RAL-307_75b 173 chr3L 68979 68991 chr3L 69066 69078 4 87 0.0 0.5 0.2 3.3 99 chr3L 68979 3` UTR Lsp1gamma + chr3L 69028 intergenic Lsp1gamma +,CR44510 + chr3L 69078 intergenic CR44510 +,Lsp1gamma + chr3L_4_65001 chr3L_65001 RAL-307_75b 174 chr3L 563978 564003 chr3L 564157 564182 4 179 0.5 1.0 0.8 2.2 204 chr3L 563978 intron hipk + chr3L 564080 intron hipk + chr3L 564182 intron hipk + chr3L_4_560001 chr3L_560001 RAL-307_75b 175 chr3L 651390 651414 chr3L 651478 651502 6 88 2.0 0.5 1.2 2.7 112 chr3L 651390 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651502 intergenic CG3402 -,Gale + chr3L_6_650001 chr3L_650001 RAL-307_75b 176 chr3L 939769 939787 chr3L 940890 940908 jockey 4 1121 2.0 0.0 1.0 2.0 1139 chr3L 939769 intron Glut1 + chr3L 940338 intron Glut1 + chr3L 940908 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-307_75b 177 chr3L 1031576 1031585 chr3L 1031651 1031660 4 76 0.5 0.5 0.5 2.7 84 chr3L 1031576 intron trio - chr3L 1031618 intron trio - chr3L 1031660 intron trio - chr3L_4_1030001 chr3L_1030001 RAL-307_75b 178 chr3L 1145245 1145261 chr3L 1145324 1145340 4 79 1.5 0.0 0.8 2.2 95 chr3L 1145245 intron bab2 - chr3L 1145292 intron bab2 - chr3L 1145340 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-307_75b 179 chr3L 1290027 1290053 chr3L 1290133 1290159 6 106 1.0 0.5 0.8 3.3 132 chr3L 1290027 exon CG32333 + chr3L 1290093 intron CG32333 + chr3L 1290159 intron CG32333 + chr3L_6_1290001 chr3L_1290001 RAL-307_75b 180 chr3L 1378937 1378947 chr3L 1379014 1379024 4 77 1.0 0.0 0.5 2.7 87 chr3L 1378937 intron,intron Ptp61F -,ru + chr3L 1378980 intron,intron Ptp61F -,ru + chr3L 1379024 intron,intron Ptp61F -,ru + chr3L_4_1375001 chr3L_1375001 RAL-307_75b 181 chr3L 2279048 2279063 chr3L 2279193 2279210 5 147 0.0 1.5 0.8 2.8 162 chr3L 2279048 intergenic not near genes chr3L 2279129 intergenic not near genes chr3L 2279210 intergenic not near genes chr3L_5_2275001 chr3L_2275001 RAL-307_75b 182 chr3L 2308007 2308030 chr3L 2308113 2308136 4 106 0.0 1.5 0.8 2.2 129 chr3L 2308007 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308136 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-307_75b 183 chr3L 2533652 2533682 chr3L 2533734 2533763 4 82 1.5 1.0 1.2 1.8 111 chr3L 2533652 intron Spn - chr3L 2533708 intron Spn - chr3L 2533763 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-307_75b 184 chr3L 3314148 3314159 chr3L 3314282 3314293 8 134 1.5 4.0 2.8 2.1 145 chr3L 3314148 intergenic ZnT63C +,Drsl2 + chr3L 3314220 intergenic Drsl2 +,ZnT63C + chr3L 3314293 intergenic Drsl2 +,ZnT63C + chr3L_8_3310001 chr3L_3310001 RAL-307_75b 185 chr3L 3484425 3484438 chr3L 3484499 3484515 5 76 0.0 3.0 1.5 2.0 90 chr3L 3484425 intron,intron CG42324 +,CG43074 - chr3L 3484470 intron,exon CG42324 +,CG43074 - chr3L 3484515 intron,intron CG42324 +,CG43074 - chr3L_5_3480001 chr3L_3480001 RAL-307_75b 186 chr3L 3777065 3777067 chr3L 22908066 22908066 4 19131000 5.5 6.5 6.0 0.6 19131001 chr3L 3777065 intron CG32264 - chr3L 13342566 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_4_13340001 chr3L_13340001 RAL-307_75b 187 chr3L 4146811 4146819 chr3L 4146893 4146901 4 82 0.0 0.0 0.0 4.0 90 chr3L 4146811 intergenic not near genes chr3L 4146856 intergenic not near genes chr3L 4146901 intergenic not near genes chr3L_4_4145001 chr3L_4145001 RAL-307_75b 188 chr3L 4238777 4238781 chr3L 4238864 4238868 4 87 0.0 0.0 0.0 4.0 91 chr3L 4238777 intergenic not near genes chr3L 4238822 intergenic not near genes chr3L 4238868 intergenic not near genes chr3L_4_4235001 chr3L_4235001 RAL-307_75b 189 chr3L 1874071 1874071 chr3L 4433865 4433866 4 2559795 2.0 2.5 2.2 1.2 2559795 chr3L 1874071 exon dre4 - chr3L 3153968 intron BtbVII + chr3L 4433866 exon nAChRbeta1 + chr3L_4_3150001 chr3L_3150001 RAL-307_75b 190 chr3L 4604876 4604881 chr3L 4604987 4604992 5 111 1.0 0.5 0.8 2.8 116 chr3L 4604876 intron Src64B - chr3L 4604934 intron Src64B - chr3L 4604992 intron Src64B - chr3L_5_4600001 chr3L_4600001 RAL-307_75b 191 chr3L 4657976 4657994 chr3L 4658438 4658456 4 462 0.0 2.0 1.0 2.0 480 chr3L 4657976 intron axo - chr3L 4658216 intron axo - chr3L 4658456 intron axo - chr3L_4_4655001 chr3L_4655001 RAL-307_75b 192 chr3L 4782107 4782124 chr3L 4782207 4782224 4 100 1.0 1.0 1.0 2.0 117 chr3L 4782107 intron RhoGEF64C + chr3L 4782166 intron RhoGEF64C + chr3L 4782224 intron RhoGEF64C + chr3L_4_4780001 chr3L_4780001 RAL-307_75b 193 chr3L 5351127 5351131 chr3L 5351212 5351216 4 85 0.0 1.5 0.8 2.2 89 chr3L 5351127 intron lama - chr3L 5351172 intron lama - chr3L 5351216 intron lama - chr3L_4_5350001 chr3L_5350001 RAL-307_75b 194 chr3L 5926317 5926350 chr3L 5926507 5926540 BS 4 190 0.0 0.5 0.2 3.3 223 chr3L 5926317 intron Vap-33B + chr3L 5926428 intron Vap-33B + chr3L 5926540 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-307_75b 195 chr3L 5992600 5992616 chr3L 5992702 5992718 4 102 1.0 0.0 0.5 2.7 118 chr3L 5992600 intergenic not near genes chr3L 5992659 intergenic not near genes chr3L 5992718 intergenic not near genes chr3L_4_5990001 chr3L_5990001 RAL-307_75b 196 chr3L 6142743 6142764 chr3L 6143001 6143022 6 258 1.0 2.0 1.5 2.4 279 chr3L 6142743 intergenic Cpr65Aw - chr3L 6142882 intergenic Cpr65Aw - chr3L 6143022 intergenic Lcp65Ad + chr3L_6_6140001 chr3L_6140001 RAL-307_75b 197 chr3L 6220923 6220945 chr3L 6230075 6230097 roo 4 9152 1.0 1.0 1.0 2.0 9174 chr3L 6220923 5` UTR pncr008:3L + chr3L 6225510 intergenic not near genes chr3L 6230097 intergenic not near genes chr3L_4_6225001 chr3L_6225001 RAL-307_75b 198 chr3L 6481986 6481991 chr3L 6482065 6482070 4 79 4.5 0.0 2.2 1.2 84 chr3L 6481986 intron CG42747 + chr3L 6482028 intron CG42747 + chr3L 6482070 intron CG42747 + chr3L_4_6480001 chr3L_6480001 RAL-307_75b 199 chr3L 6781120 6781147 chr3L 6783133 6783160 Doc 7 2013 2.0 0.5 1.2 3.2 2040 chr3L 6781120 intergenic not near genes chr3L 6782140 intergenic not near genes chr3L 6783160 intergenic not near genes chr3L_7_6780001 chr3L_6780001 RAL-307_75b 200 chr3L 7042219 7042234 chr3L 7042331 7042346 4 112 2.0 1.0 1.5 1.6 127 chr3L 7042219 intron Mp + chr3L 7042282 intron Mp + chr3L 7042346 intron Mp + chr3L_4_7040001 chr3L_7040001 RAL-307_75b 201 chr3L 7129963 7129986 chr3L 7130155 7130178 BS 5 192 0.0 1.5 0.8 2.8 215 chr3L 7129963 intergenic CG15829 + chr3L 7130070 intergenic CG15829 + chr3L 7130178 intergenic not near genes chr3L_5_7130001 chr3L_7130001 RAL-307_75b 202 chr3L 7244929 7244960 chr3L 7245021 7245052 8 92 0.0 0.5 0.2 6.7 123 chr3L 7244929 exon mei-P22 + chr3L 7244990 exon mei-P22 + chr3L 7245052 exon mei-P22 + chr3L_8_7240001 chr3L_7240001 RAL-307_75b 203 chr3L 7869669 7869669 chr3L 7869748 7869749 4 80 1.0 0.5 0.8 2.2 80 chr3L 7869669 exon CG32365 + chr3L 7869709 exon CG32365 + chr3L 7869749 exon CG32365 + chr3L_4_7865001 chr3L_7865001 RAL-307_75b 204 chr3L 7875034 7875065 chr3L 7876864 7876895 4 1830 3.5 4.0 3.8 0.8 1861 chr3L 7875034 intron CG32365 + chr3L 7875964 intron CG32365 + chr3L 7876895 intron CG32365 + chr3L_4_7875001 chr3L_7875001 RAL-307_75b 205 chr3L 7883751 7883769 chr3L 7883908 7883926 5 157 1.0 0.0 0.5 3.3 175 chr3L 7883751 intron CG32365 + chr3L 7883838 intron CG32365 + chr3L 7883926 intron CG32365 + chr3L_5_7880001 chr3L_7880001 RAL-307_75b 206 chr3L 7999860 7999861 chr3L 7999943 7999944 4 83 0.5 0.5 0.5 2.7 84 chr3L 7999860 intron nmo + chr3L 7999902 intron nmo + chr3L 7999944 intron nmo + chr3L_4_7995001 chr3L_7995001 RAL-307_75b 207 chr3L 8317596 8317596 chr3L 22908066 22908067 4 14590470 1.5 6.5 4.0 0.8 14590471 chr3L 8317596 intergenic not near genes chr3L 15612832 intergenic CG13449 -,comm3 - chr3L 22908067 intergenic not near genes chr3L_4_15610001 chr3L_15610001 RAL-307_75b 208 chr3L 8336909 8336931 chr3L 8336985 8337007 4 76 1.5 0.5 1.0 2.0 98 chr3L 8336909 intron Cpr66Cb + chr3L 8336958 intron Cpr66Cb + chr3L 8337007 intron Cpr66Cb + chr3L_4_8335001 chr3L_8335001 RAL-307_75b 209 chr3L 8395836 8395861 chr3L 8395932 8395956 4 96 0.5 0.0 0.2 3.3 120 chr3L 8395836 intergenic CG7120 + chr3L 8395896 intergenic CG7120 + chr3L 8395956 intergenic CG7120 + chr3L_4_8395001 chr3L_8395001 RAL-307_75b 210 chr3L 8498303 8498313 chr3L 8505769 8505780 blood 4 7466 1.0 3.5 2.2 1.2 7477 chr3L 8498303 intron CG43163 - chr3L 8502042 intron CG43163 - chr3L 8505780 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-307_75b 211 chr3L 9239694 9239704 chr3L 9239999 9240009 7 305 3.0 1.0 2.0 2.3 315 chr3L 9239694 intergenic not near genes chr3L 9239852 intergenic not near genes chr3L 9240009 intergenic not near genes chr3L_7_9235001 chr3L_9235001 RAL-307_75b 212 chr3L 9241126 9241144 chr3L 9241206 9241224 7 80 2.5 0.0 1.2 3.2 98 chr3L 9241126 intergenic not near genes chr3L 9241175 intergenic not near genes chr3L 9241224 intergenic not near genes chr3L_7_9240001 chr3L_9240001 RAL-307_75b 213 chr3L 9571909 9571913 chr3L 9572257 9572261 jockey 5 348 0.0 0.0 0.0 5.0 352 chr3L 9571909 intron CG42673 + chr3L 9572085 intron CG42673 + chr3L 9572261 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-307_75b 214 chr3L 9689511 9689541 chr3L 9689591 9689621 7 80 0.5 2.0 1.2 3.2 110 chr3L 9689511 intron CG6767 - chr3L 9689566 intron CG6767 - chr3L 9689621 intron CG6767 - chr3L_7_9685001 chr3L_9685001 RAL-307_75b 215 chr3L 9697777 9697789 chr3L 9697869 9697881 4 92 1.5 1.5 1.5 1.6 104 chr3L 9697777 intergenic not near genes chr3L 9697829 intergenic not near genes chr3L 9697881 intergenic UbcD4 + chr3L_4_9695001 chr3L_9695001 RAL-307_75b 216 chr3L 9840004 9840041 chr3L 9840105 9840142 6 101 0.0 0.5 0.2 5.0 138 chr3L 9840004 3` UTR RasGAP1 - chr3L 9840073 3` UTR RasGAP1 - chr3L 9840142 3` UTR RasGAP1 - chr3L_6_9840001 chr3L_9840001 RAL-307_75b 217 chr3L 9987111 9987130 chr3L 9987189 9987205 4 77 0.5 0.5 0.5 2.7 94 chr3L 9987111 intron dpr6 + chr3L 9987158 intron dpr6 + chr3L 9987205 intron dpr6 + chr3L_4_9985001 chr3L_9985001 RAL-307_75b 218 chr3L 10003155 10003179 chr3L 10003252 10003276 4 97 2.5 0.5 1.5 1.6 121 chr3L 10003155 intron dpr6 + chr3L 10003216 intron dpr6 + chr3L 10003276 intron dpr6 + chr3L_4_10000001 chr3L_10000001 RAL-307_75b 219 chr3L 10127739 10127775 chr3L 10127815 10127852 4 77 1.0 0.5 0.8 2.2 113 chr3L 10127739 intron dpr6 + chr3L 10127796 intron dpr6 + chr3L 10127852 intron dpr6 + chr3L_4_10125001 chr3L_10125001 RAL-307_75b 220 chr3L 10161443 10161445 chr3L 10161521 10161524 4 79 0.0 1.0 0.5 2.7 81 chr3L 10161443 intron dpr10 - chr3L 10161484 intron dpr10 - chr3L 10161524 intron dpr10 - chr3L_4_10160001 chr3L_10160001 RAL-307_75b 221 chr3L 10214743 10214829 chr3L 10214829 10214931 5 96 0.0 0.0 0.0 5.0 188 chr3L 10214743 intergenic not near genes chr3L 10214837 intergenic not near genes chr3L 10214931 intergenic not near genes chr3L_5_10210001 chr3L_10210001 RAL-307_75b 222 chr3L 10298672 10298701 chr3L 10298759 10298788 9 87 0.5 0.0 0.2 7.5 116 chr3L 10298672 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298788 intergenic not near genes chr3L_9_10295001 chr3L_10295001 RAL-307_75b 223 chr3L 10417575 10417603 chr3L 10417651 10417680 4 77 0.5 0.5 0.5 2.7 105 chr3L 10417575 intergenic not near genes chr3L 10417628 intergenic not near genes chr3L 10417680 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-307_75b 224 chr3L 10658076 10658212 chr3L 10658153 10658339 5 97 1.0 1.0 1.0 2.5 263 chr3L 10658076 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658339 intron CG32066 - chr3L_5_10655001 chr3L_10655001 RAL-307_75b 225 chr3L 10762834 10762843 chr3L 10762917 10762927 4 84 1.5 1.5 1.5 1.6 93 chr3L 10762834 intergenic not near genes chr3L 10762880 intergenic not near genes chr3L 10762927 intergenic not near genes chr3L_4_10760001 chr3L_10760001 RAL-307_75b 226 chr3L 11723087 11723110 chr3L 11727880 11727905 Doc 6 4794 0.0 1.5 0.8 3.3 4818 chr3L 11723087 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727905 3` UTR Bmcp + chr3L_6_11725001 chr3L_11725001 RAL-307_75b 227 chr3L 11847171 11847174 chr3L 11847261 11847264 4 90 1.0 0.0 0.5 2.7 93 chr3L 11847171 intergenic CG12521 - chr3L 11847218 intergenic CG12521 - chr3L 11847264 intergenic CG12521 - chr3L_4_11845001 chr3L_11845001 RAL-307_75b 228 chr3L 12515200 12515225 chr3L 12515281 12515306 5 81 0.5 1.0 0.8 2.8 106 chr3L 12515200 5` UTR tral + chr3L 12515253 5` UTR tral + chr3L 12515306 5` UTR tral + chr3L_5_12515001 chr3L_12515001 RAL-307_75b 229 chr3L 12978762 12978779 chr3L 12978838 12978858 5 78 0.0 0.0 0.0 5.0 96 chr3L 12978762 intergenic not near genes chr3L 12978810 intergenic not near genes chr3L 12978858 intergenic not near genes chr3L_5_12975001 chr3L_12975001 RAL-307_75b 230 chr3L 13007695 13007947 chr3L 13007774 13008045 4 88 0.5 1.0 0.8 2.2 350 chr3L 13007695 exon CG11263 + chr3L 13007870 3` UTR CG11263 + chr3L 13008045 intergenic CG11263 +,CG14117 + chr3L_4_13005001 chr3L_13005001 RAL-307_75b 231 chr3L 13311039 13311050 chr3L 13311120 13311131 4 80 0.5 2.0 1.2 1.8 92 chr3L 13311039 intergenic not near genes chr3L 13311085 intergenic not near genes chr3L 13311131 intergenic not near genes chr3L_4_13310001 chr3L_13310001 RAL-307_75b 232 chr3L 13559961 13559996 chr3L 13560047 13560082 4 86 1.0 1.0 1.0 2.0 121 chr3L 13559961 intron bru-3 - chr3L 13560022 intron bru-3 - chr3L 13560082 intron bru-3 - chr3L_4_13560001 chr3L_13560001 RAL-307_75b 233 chr3L 14092748 14092751 chr3L 14092831 14092834 4 83 0.5 0.0 0.2 3.3 86 chr3L 14092748 intergenic not near genes chr3L 14092791 intergenic not near genes chr3L 14092834 intergenic not near genes chr3L_4_14090001 chr3L_14090001 RAL-307_75b 234 chr3L 14356518 14356552 chr3L 14356598 14356632 8 80 1.0 1.0 1.0 4.0 114 chr3L 14356518 intron fz + chr3L 14356575 intron fz + chr3L 14356632 intron fz + chr3L_8_14355001 chr3L_14355001 RAL-307_75b 235 chr3L 14437884 14437912 chr3L 14437978 14438006 6 94 0.5 0.0 0.2 5.0 122 chr3L 14437884 intron bbg - chr3L 14437945 intron bbg - chr3L 14438006 intron bbg - chr3L_6_14435001 chr3L_14435001 RAL-307_75b 236 chr3L 14995918 14995949 chr3L 14996018 14996050 7 101 0.5 1.5 1.0 3.5 132 chr3L 14995918 intron Zip71B + chr3L 14995984 intron Zip71B + chr3L 14996050 intron Zip71B + chr3L_7_14995001 chr3L_14995001 RAL-307_75b 237 chr3L 15037422 15037444 chr3L 15037508 15037530 7 86 0.5 0.0 0.2 5.8 108 chr3L 15037422 intron Sytbeta - chr3L 15037476 intron Sytbeta - chr3L 15037530 intron Sytbeta - chr3L_7_15035001 chr3L_15035001 RAL-307_75b 238 chr3L 15085059 15085070 chr3L 15086225 15086236 1360 4 1166 1.0 0.5 0.8 2.2 1177 chr3L 15085059 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086236 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-307_75b 239 chr3L 15329389 15329394 chr3L 15329479 15329484 4 90 0.5 3.0 1.8 1.4 95 chr3L 15329389 intergenic not near genes chr3L 15329436 intergenic not near genes chr3L 15329484 intergenic not near genes chr3L_4_15325001 chr3L_15325001 RAL-307_75b 240 chr3L 16184114 16184132 chr3L 16188933 16188951 X-element 6 4819 2.0 0.0 1.0 3.0 4837 chr3L 16184114 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188951 intergenic not near genes chr3L_6_16185001 chr3L_16185001 RAL-307_75b 241 chr3L 16616510 16616543 chr3L 16621837 16621871 297 5 5328 0.0 0.0 0.0 5.0 5361 chr3L 16616510 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621871 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-307_75b 242 chr3L 16643658 16643672 chr3L 16643740 16643752 4 82 1.0 0.0 0.5 2.7 94 chr3L 16643658 intron Abl - chr3L 16643705 intron Abl - chr3L 16643752 intron Abl - chr3L_4_16640001 chr3L_16640001 RAL-307_75b 243 chr3L 16757645 16757663 chr3L 16757735 16757753 5 90 1.0 0.5 0.8 2.8 108 chr3L 16757645 intergenic not near genes chr3L 16757699 intergenic not near genes chr3L 16757753 intergenic not near genes chr3L_5_16755001 chr3L_16755001 RAL-307_75b 244 chr3L 16760848 16760882 chr3L 16760986 16761020 4 138 0.0 0.5 0.2 3.3 172 chr3L 16760848 intergenic not near genes chr3L 16760934 intergenic not near genes chr3L 16761020 intergenic not near genes chr3L_4_16760001 chr3L_16760001 RAL-307_75b 245 chr3L 16845031 16845036 chr3L 16845144 16845149 4 113 0.5 0.0 0.2 3.3 118 chr3L 16845031 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845149 intergenic CG9669 -,CG9715 + chr3L_4_16845001 chr3L_16845001 RAL-307_75b 246 chr3L 16873341 16873360 chr3L 16873446 16873465 4 105 1.0 0.5 0.8 2.2 124 chr3L 16873341 intron Lmpt + chr3L 16873403 intron Lmpt + chr3L 16873465 intron Lmpt + chr3L_4_16870001 chr3L_16870001 RAL-307_75b 247 chr3L 16945725 16945759 chr3L 16954878 16954911 roo 4 9152 2.0 0.5 1.2 1.8 9186 chr3L 16945725 exon Obp73a + chr3L 16950318 intergenic not near genes chr3L 16954911 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-307_75b 248 chr3L 17120654 17120925 chr3L 17120730 17121002 6 76 2.0 1.5 1.8 2.1 348 chr3L 17120654 intron Rbp6 - chr3L 17120828 intron Rbp6 - chr3L 17121002 intron Rbp6 - chr3L_6_17120001 chr3L_17120001 RAL-307_75b 249 chr3L 17272241 17272266 chr3L 17272374 17272399 5 133 1.0 0.5 0.8 2.8 158 chr3L 17272241 intergenic not near genes chr3L 17272320 intergenic not near genes chr3L 17272399 intergenic not near genes chr3L_5_17270001 chr3L_17270001 RAL-307_75b 250 chr3L 17419866 17419884 chr3L 17419979 17419997 6 112 0.5 1.5 1.0 3.0 131 chr3L 17419866 intron blot - chr3L 17419932 intron blot - chr3L 17419997 intron blot - chr3L_6_17415001 chr3L_17415001 RAL-307_75b 251 chr3L 17789849 17789874 chr3L 17789924 17789950 5 76 0.0 0.0 0.0 5.0 101 chr3L 17789849 intergenic not near genes chr3L 17789900 intergenic not near genes chr3L 17789950 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-307_75b 252 chr3L 18134617 18134628 chr3L 18134754 18134765 4 137 0.0 0.5 0.2 3.3 148 chr3L 18134617 intergenic not near genes chr3L 18134691 intergenic not near genes chr3L 18134765 intergenic not near genes chr3L_4_18130001 chr3L_18130001 RAL-307_75b 253 chr3L 18248962 18248978 chr3L 18249060 18249076 4 98 0.0 1.5 0.8 2.2 114 chr3L 18248962 intergenic not near genes chr3L 18249019 intergenic not near genes chr3L 18249076 intergenic not near genes chr3L_4_18245001 chr3L_18245001 RAL-307_75b 254 chr3L 18520551 18520570 chr3L 18520632 18520651 4 81 0.5 0.5 0.5 2.7 100 chr3L 18520551 intergenic not near genes chr3L 18520601 intergenic not near genes chr3L 18520651 intergenic not near genes chr3L_4_18520001 chr3L_18520001 RAL-307_75b 255 chr3L 18582217 18582244 chr3L 18582302 18582329 4 85 0.5 0.5 0.5 2.7 112 chr3L 18582217 intergenic not near genes chr3L 18582273 intergenic not near genes chr3L 18582329 intergenic not near genes chr3L_4_18580001 chr3L_18580001 RAL-307_75b 256 chr3L 18593946 18593981 chr3L 18595926 18595961 Doc 4 1980 0.5 1.0 0.8 2.2 2015 chr3L 18593946 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595961 intergenic CR45389 + chr3L_4_18590001 chr3L_18590001 RAL-307_75b 257 chr3L 18638579 18638606 chr3L 18638673 18638700 5 94 0.5 0.5 0.5 3.3 121 chr3L 18638579 intron MYPT-75D + chr3L 18638640 intron MYPT-75D + chr3L 18638700 intron MYPT-75D + chr3L_5_18635001 chr3L_18635001 RAL-307_75b 258 chr3L 18677885 18677899 chr3L 18677980 18677994 4 95 0.5 0.5 0.5 2.7 109 chr3L 18677885 intergenic GNBP1 + chr3L 18677940 intergenic GNBP1 + chr3L 18677994 intergenic GNBP1 + chr3L_4_18675001 chr3L_18675001 RAL-307_75b 259 chr3L 19015184 19015214 chr3L 19015268 19015294 4 81 0.0 0.5 0.2 3.3 110 chr3L 19015184 intron nkd - chr3L 19015239 intron nkd - chr3L 19015294 intron nkd - chr3L_4_19015001 chr3L_19015001 RAL-307_75b 260 chr3L 19208056 19208082 chr3L 19209430 19209456 Doc 5 1374 2.0 0.0 1.0 2.5 1400 chr3L 19208056 intron fz2 - chr3L 19208756 intron fz2 - chr3L 19209456 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-307_75b 261 chr3L 19269818 19269843 chr3L 19270022 19270047 7 204 0.5 1.0 0.8 3.9 229 chr3L 19269818 intron,exon CG14085 +,CG14088 - chr3L 19269932 intron,exon CG14085 +,CG14088 - chr3L 19270047 intron,exon CG14085 +,CG14088 - chr3L_7_19265001 chr3L_19265001 RAL-307_75b 262 chr3L 19265229 19265248 chr3L 19272811 19272830 4 7582 9.0 7.0 8.0 0.4 7601 chr3L 19265229 3` UTR,exon CG42374 +,CG9666 + chr3L 19269030 intergenic CG9629 -,CG14085 + chr3L 19272830 exon CG14085 + chr3L_4_19265001 chr3L_19265001 RAL-307_75b 263 chr3L 19527939 19527943 chr3L 19528018 19528022 4 79 1.5 0.5 1.0 2.0 83 chr3L 19527939 intergenic not near genes chr3L 19527980 intergenic not near genes chr3L 19528022 intergenic not near genes chr3L_4_19525001 chr3L_19525001 RAL-307_75b 264 chr3L 19848502 19848528 chr3L 19857692 19857718 roo 5 9190 1.5 1.5 1.5 2.0 9216 chr3L 19848502 intron Papss + chr3L 19853110 intron Papss + chr3L 19857718 intron Papss + chr3L_5_19850001 chr3L_19850001 RAL-307_75b 265 chr3L 19861835 19861845 chr3L 19863623 19863633 S-element 4 1788 3.0 1.5 2.2 1.2 1798 chr3L 19861835 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863633 intergenic not near genes chr3L_4_19860001 chr3L_19860001 RAL-307_75b 266 chr3L 20386952 20386964 chr3L 20387054 20387066 4 102 0.5 0.0 0.2 3.3 114 chr3L 20386952 intron fbl + chr3L 20387009 intron fbl + chr3L 20387066 intron fbl + chr3L_4_20385001 chr3L_20385001 RAL-307_75b 267 chr3L 20819626 20819652 chr3L 20819849 20819875 5 223 0.5 1.0 0.8 2.8 249 chr3L 20819626 intron Pka-R1 + chr3L 20819750 intron Pka-R1 + chr3L 20819875 intron Pka-R1 + chr3L_5_20815001 chr3L_20815001 RAL-307_75b 268 chr3L 21151868 21151890 chr3L 21156952 21156974 flea 5 5084 0.5 0.0 0.2 4.2 5106 chr3L 21151868 intron Ac78C - chr3L 21154421 intron Ac78C - chr3L 21156974 intron Ac78C - chr3L_5_21150001 chr3L_21150001 RAL-307_75b 269 chr3L 21372727 21372744 chr3L 21379235 21379252 McClintock 4 6508 0.5 0.5 0.5 2.7 6525 chr3L 21372727 intergenic not near genes chr3L 21375990 intergenic not near genes chr3L 21379252 intergenic not near genes chr3L_4_21375001 chr3L_21375001 RAL-307_75b 270 chr3L 21415140 21415154 chr3L 21415223 21415237 4 83 1.0 0.5 0.8 2.2 97 chr3L 21415140 intron rgn + chr3L 21415188 intron rgn + chr3L 21415237 intron rgn + chr3L_4_21415001 chr3L_21415001 RAL-307_75b 271 chr3L 21749319 21749340 chr3L 21754478 21754500 Doc 4 5160 0.5 2.0 1.2 1.8 5181 chr3L 21749319 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754500 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-307_75b 272 chr3L 21836733 21836753 chr3L 21836819 21836837 4 85 2.5 2.0 2.2 1.2 104 chr3L 21836733 3` UTR P5CDh1 - chr3L 21836785 3` UTR P5CDh1 - chr3L 21836837 3` UTR P5CDh1 - chr3L_4_21835001 chr3L_21835001 RAL-307_75b 273 chr3L 21874998 21875015 chr3L 21875155 21875170 4 156 0.5 0.0 0.2 3.3 172 chr3L 21874998 intron mub + chr3L 21875084 intron mub + chr3L 21875170 intron mub + chr3L_4_21875001 chr3L_21875001 RAL-307_75b 274 chr3L 22099676 22099705 chr3L 22105862 22105891 3S18 6 6186 0.5 0.5 0.5 4.0 6215 chr3L 22099676 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105891 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-307_75b 275 chr3L 22853478 22853721 chr3L 22853564 22853806 9 86 0.0 4.0 2.0 3.0 328 chr3L 22853478 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853642 5` UTR CR43426 + chr3L 22853806 5` UTR CR43426 + chr3L_9_22850001 chr3L_22850001 RAL-307_75b 276 chr3L 19220634 19220635 chr3L 22908067 22908067 4 3687433 0.5 6.5 3.5 0.9 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-307_75b 277 chr3L 25513581 25513608 chr3L 25513660 25513687 4 78 0.0 0.5 0.2 3.3 106 chr3L 25513581 intron CG41343 - chr3L 25513634 intron CG41343 - chr3L 25513687 intron CG41343 - chr3L_4_25510001 chr3L_25510001 RAL-307_75b 278 chr3L 27972722 27972879 chr3L 27972814 27972957 5 86 7.0 4.5 5.8 0.7 235 chr3L 27972722 exon CG17514 - chr3L 27972840 exon CG17514 - chr3L 27972957 exon CG17514 - chr3L_5_27970001 chr3L_27970001 RAL-307_75b 279 chr3L 27971591 27971601 chr3L 27972946 27972956 4 1355 7.0 1.5 4.2 0.8 1365 chr3L 27971591 exon CG17514 - chr3L 27972274 exon CG17514 - chr3L 27972956 exon CG17514 - chr3L_4_27970001 chr3L_27970001 RAL-307_75b 280 chr3R 3178702 3178708 chr3R 3595186 3595192 4 416484 3.0 2.5 2.8 1.1 416490 chr3R 3178702 intron CG42617 - chr3R 3386947 intergenic not near genes chr3R 3595192 intergenic not near genes chr3R_4_3385001 chr3R_3385001 RAL-307_75b 281 chr3R 4206082 4206091 chr3R 4211657 4211666 mdg3 4 5575 2.0 0.0 1.0 2.0 5584 chr3R 4206082 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211666 intron CG14636 - chr3R_4_4205001 chr3R_4205001 RAL-307_75b 282 chr3R 4250929 4250950 chr3R 4251020 4251041 4 91 1.0 0.0 0.5 2.7 112 chr3R 4250929 5` UTR TwdlG - chr3R 4250985 5` UTR TwdlG - chr3R 4251041 5` UTR TwdlG - chr3R_4_4250001 chr3R_4250001 RAL-307_75b 283 chr3R 4769169 4769191 chr3R 4769247 4769269 6 78 0.0 0.5 0.2 5.0 100 chr3R 4769169 intron,intron atms +,CG44098 - chr3R 4769219 intron,intron atms +,CG44098 - chr3R 4769269 intron,intron atms +,CG44098 - chr3R_6_4765001 chr3R_4765001 RAL-307_75b 284 chr3R 4861580 4861598 chr3R 4861660 4861679 4 80 1.0 0.0 0.5 2.7 99 chr3R 4861580 intron opa + chr3R 4861630 intron opa + chr3R 4861679 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-307_75b 285 chr3R 5105547 5105565 chr3R 5105630 5105648 4 83 0.5 0.0 0.2 3.3 101 chr3R 5105547 intergenic not near genes chr3R 5105598 intergenic not near genes chr3R 5105648 intergenic not near genes chr3R_4_5105001 chr3R_5105001 RAL-307_75b 286 chr3R 5712081 5712115 chr3R 5712169 5712202 5 88 0.5 1.0 0.8 2.8 121 chr3R 5712081 3` UTR plx + chr3R 5712142 3` UTR plx + chr3R 5712202 3` UTR plx + chr3R_5_5710001 chr3R_5710001 RAL-307_75b 287 chr3R 5809113 5809130 chr3R 5809354 5809371 pogo 5 241 1.0 0.5 0.8 2.8 258 chr3R 5809113 3` UTR CG11000 + chr3R 5809242 3` UTR CG11000 + chr3R 5809371 3` UTR CG11000 + chr3R_5_5805001 chr3R_5805001 RAL-307_75b 288 chr3R 5927561 5927587 chr3R 5927801 5927825 pogo 4 240 1.0 0.0 0.5 2.7 264 chr3R 5927561 intron CG34113 - chr3R 5927693 intron CG34113 - chr3R 5927825 intron CG34113 - chr3R_4_5925001 chr3R_5925001 RAL-307_75b 289 chr3R 5935375 5935391 chr3R 5935451 5935467 4 76 1.5 1.0 1.2 1.8 92 chr3R 5935375 intron CG34113 - chr3R 5935421 intron CG34113 - chr3R 5935467 intron CG34113 - chr3R_4_5935001 chr3R_5935001 RAL-307_75b 290 chr3R 6015986 6015991 chr3R 6024467 6024472 Tirant 4 8481 1.5 2.0 1.8 1.4 8486 chr3R 6015986 intergenic not near genes chr3R 6020229 intergenic not near genes chr3R 6024472 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-307_75b 291 chr3R 6175193 6175197 chr3R 6182465 6182469 HMS-Beagle2 4 7272 2.5 1.0 1.8 1.4 7276 chr3R 6175193 intergenic Osi1 + chr3R 6178831 intron CR45194 + chr3R 6182469 intergenic CR45194 + chr3R_4_6175001 chr3R_6175001 RAL-307_75b 292 chr3R 6191169 6191192 chr3R 6191247 6191272 4 79 2.0 1.5 1.8 1.4 103 chr3R 6191169 intron NPFR + chr3R 6191220 intron NPFR + chr3R 6191272 intron NPFR + chr3R_4_6190001 chr3R_6190001 RAL-307_75b 293 chr3R 6670571 6670583 chr3R 6670680 6670692 5 109 2.0 0.5 1.2 2.3 121 chr3R 6670571 intron lab - chr3R 6670632 intron lab - chr3R 6670692 intron lab - chr3R_5_6670001 chr3R_6670001 RAL-307_75b 294 chr3R 6862219 6862230 chr3R 6862306 6862317 4 87 3.0 1.0 2.0 1.3 98 chr3R 6862219 intergenic not near genes chr3R 6862268 intergenic not near genes chr3R 6862317 intergenic not near genes chr3R_4_6860001 chr3R_6860001 RAL-307_75b 295 chr3R 7012220 7012234 chr3R 7012298 7012312 4 78 0.0 0.5 0.2 3.3 92 chr3R 7012220 intergenic not near genes chr3R 7012266 intergenic not near genes chr3R 7012312 intergenic not near genes chr3R_4_7010001 chr3R_7010001 RAL-307_75b 296 chr3R 7641065 7641093 chr3R 7642629 7642657 hobo 7 1564 1.0 0.5 0.8 3.9 1592 chr3R 7641065 intergenic not near genes chr3R 7641861 intergenic not near genes chr3R 7642657 intergenic not near genes chr3R_7_7640001 chr3R_7640001 RAL-307_75b 297 chr3R 7948451 7948468 chr3R 7948528 7948545 4 76 1.0 0.5 0.8 2.2 94 chr3R 7948451 intron dsx - chr3R 7948498 intron dsx - chr3R 7948545 intron dsx - chr3R_4_7945001 chr3R_7945001 RAL-307_75b 298 chr3R 7973317 7973336 chr3R 7974379 7974398 1360 4 1062 0.0 1.0 0.5 2.7 1081 chr3R 7973317 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974398 intergenic CD98hc - chr3R_4_7970001 chr3R_7970001 RAL-307_75b 299 chr3R 8182651 8182669 chr3R 8182745 8182763 4 94 1.0 1.5 1.2 1.8 112 chr3R 8182651 intergenic not near genes chr3R 8182707 intergenic not near genes chr3R 8182763 intergenic not near genes chr3R_4_8180001 chr3R_8180001 RAL-307_75b 300 chr3R 8339246 8339247 chr3R 21907534 21907535 4 13568288 4.0 5.5 4.8 0.7 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-307_75b 301 chr3R 8478079 8478099 chr3R 8478159 8478179 4 80 0.5 2.0 1.2 1.8 100 chr3R 8478079 intergenic CG45263 - chr3R 8478129 intergenic not near genes chr3R 8478179 intergenic not near genes chr3R_4_8475001 chr3R_8475001 RAL-307_75b 302 chr3R 8570485 8570493 chr3R 8575121 8575129 HMS-Beagle 6 4636 2.0 1.0 1.5 2.4 4644 chr3R 8570485 intergenic not near genes chr3R 8572807 intergenic not near genes chr3R 8575129 intergenic not near genes chr3R_6_8570001 chr3R_8570001 RAL-307_75b 303 chr3R 8843522 8843531 chr3R 8843733 8843743 5 212 2.0 1.0 1.5 2.0 221 chr3R 8843522 intron pyd - chr3R 8843632 intron pyd - chr3R 8843743 intron pyd - chr3R_5_8840001 chr3R_8840001 RAL-307_75b 304 chr3R 8894875 8894903 chr3R 8896031 8896059 1360 5 1156 0.0 1.0 0.5 3.3 1184 chr3R 8894875 intron pyd - chr3R 8895467 intron pyd - chr3R 8896059 intron pyd - chr3R_5_8895001 chr3R_8895001 RAL-307_75b 305 chr3R 9108867 9108871 chr3R 9108943 9108946 6 76 2.0 0.0 1.0 3.0 79 chr3R 9108867 intron pum - chr3R 9108906 intron pum - chr3R 9108946 intron pum - chr3R_6_9105001 chr3R_9105001 RAL-307_75b 306 chr3R 9181827 9181841 chr3R 9181910 9181924 7 83 1.0 0.0 0.5 4.7 97 chr3R 9181827 intron pum - chr3R 9181876 intron pum - chr3R 9181924 intron pum - chr3R_7_9180001 chr3R_9180001 RAL-307_75b 307 chr3R 9278783 9278811 chr3R 9284043 9284071 Rt1a 8 5260 3.5 0.5 2.0 2.7 5288 chr3R 9278783 intergenic not near genes chr3R 9281427 intergenic not near genes chr3R 9284071 intergenic not near genes chr3R_8_9280001 chr3R_9280001 RAL-307_75b 308 chr3R 9319590 9319607 chr3R 9320025 9320042 jockey 5 435 0.5 0.0 0.2 4.2 452 chr3R 9319590 intron CG8861 - chr3R 9319816 intron CG8861 - chr3R 9320042 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-307_75b 309 chr3R 9601461 9601484 chr3R 9601579 9601602 6 118 1.5 1.5 1.5 2.4 141 chr3R 9601461 intron CG8312 + chr3R 9601532 intron CG8312 + chr3R 9601602 intron CG8312 + chr3R_6_9600001 chr3R_9600001 RAL-307_75b 310 chr3R 10430677 10430706 chr3R 10430766 10430795 4 89 0.5 1.0 0.8 2.2 118 chr3R 10430677 intergenic not near genes chr3R 10430736 intergenic not near genes chr3R 10430795 intergenic not near genes chr3R_4_10430001 chr3R_10430001 RAL-307_75b 311 chr3R 10971498 10971503 chr3R 10971589 10971594 4 91 0.5 0.0 0.2 3.3 96 chr3R 10971498 intergenic not near genes chr3R 10971546 intergenic not near genes chr3R 10971594 intergenic not near genes chr3R_4_10970001 chr3R_10970001 RAL-307_75b 312 chr3R 11102323 11102337 chr3R 11102404 11102418 6 81 0.5 0.0 0.2 5.0 95 chr3R 11102323 intergenic not near genes chr3R 11102370 intergenic not near genes chr3R 11102418 intergenic not near genes chr3R_6_11100001 chr3R_11100001 RAL-307_75b 313 chr3R 11197991 11197998 chr3R 11198090 11198097 4 99 2.5 0.0 1.2 1.8 106 chr3R 11197991 intron cu + chr3R 11198044 intron cu + chr3R 11198097 intron cu + chr3R_4_11195001 chr3R_11195001 RAL-307_75b 314 chr3R 11379236 11379266 chr3R 11388391 11388421 roo 6 9155 1.5 0.5 1.0 3.0 9185 chr3R 11379236 intron pros + chr3R 11383828 intron pros + chr3R 11388421 intron pros + chr3R_6_11380001 chr3R_11380001 RAL-307_75b 315 chr3R 11442352 11442366 chr3R 11442535 11442551 4 184 1.0 1.0 1.0 2.0 199 chr3R 11442352 intron,intron sals -,CG17230 + chr3R 11442452 intron,intron sals -,CG17230 + chr3R 11442551 intron,intron sals -,CG17230 + chr3R_4_11440001 chr3R_11440001 RAL-307_75b 316 chr3R 11734166 11734186 chr3R 11734285 11734305 4 118 0.0 1.0 0.5 2.7 139 chr3R 11734166 intergenic not near genes chr3R 11734236 intergenic not near genes chr3R 11734305 intergenic not near genes chr3R_4_11730001 chr3R_11730001 RAL-307_75b 317 chr3R 11853780 11853793 chr3R 11853882 11853898 4 104 0.0 0.0 0.0 4.0 118 chr3R 11853780 intron CG6959 - chr3R 11853839 intron CG6959 - chr3R 11853898 intron CG6959 - chr3R_4_11850001 chr3R_11850001 RAL-307_75b 318 chr3R 12022885 12022913 chr3R 12025062 12025090 pogo 6 2177 1.0 1.0 1.0 3.0 2205 chr3R 12022885 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025090 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RAL-307_75b 319 chr3R 12267867 12267877 chr3R 12267947 12267957 7 80 1.0 1.5 1.2 3.2 90 chr3R 12267867 intron svp + chr3R 12267912 intron svp + chr3R 12267957 intron svp + chr3R_7_12265001 chr3R_12265001 RAL-307_75b 320 chr3R 12522353 12522382 chr3R 12522439 12522468 4 86 0.0 0.0 0.0 4.0 115 chr3R 12522353 5` UTR Octbeta3R - chr3R 12522410 5` UTR Octbeta3R - chr3R 12522468 5` UTR Octbeta3R - chr3R_4_12520001 chr3R_12520001 RAL-307_75b 321 chr3R 12710227 12710228 chr3R 12713346 12713347 4 3119 4.5 5.5 5.0 0.7 3120 chr3R 12710227 exon mus308 - chr3R 12711787 exon mus308 - chr3R 12713347 3` UTR Men - chr3R_4_12710001 chr3R_12710001 RAL-307_75b 322 chr3R 12748962 12748983 chr3R 12749055 12749076 5 93 0.0 1.0 0.5 3.3 114 chr3R 12748962 intron beat-Vc - chr3R 12749019 intron beat-Vc - chr3R 12749076 intron beat-Vc - chr3R_5_12745001 chr3R_12745001 RAL-307_75b 323 chr3R 12920161 12920179 chr3R 12925364 12925382 copia 7 5203 0.0 2.0 1.0 3.5 5221 chr3R 12920161 intron beat-Vb + chr3R 12922772 intron beat-Vb + chr3R 12925382 intron beat-Vb + chr3R_7_12920001 chr3R_12920001 RAL-307_75b 324 chr3R 13195953 13195977 chr3R 13196047 13196072 4 95 1.0 3.0 2.0 1.3 119 chr3R 13195953 intergenic not near genes chr3R 13196012 intergenic not near genes chr3R 13196072 intergenic not near genes chr3R_4_13195001 chr3R_13195001 RAL-307_75b 325 chr3R 13391631 13391662 chr3R 13391709 13391740 4 78 1.5 0.0 0.8 2.2 109 chr3R 13391631 intron CCHa2 - chr3R 13391686 intron CCHa2 - chr3R 13391740 intron CCHa2 - chr3R_4_13390001 chr3R_13390001 RAL-307_75b 326 chr3R 13394676 13394703 chr3R 13395025 13395052 4 349 0.5 1.0 0.8 2.2 376 chr3R 13394676 intron CCHa2 - chr3R 13394864 intron CCHa2 - chr3R 13395052 intron CCHa2 - chr3R_4_13390001 chr3R_13390001 RAL-307_75b 327 chr3R 13692787 13692801 chr3R 13692865 13692877 4 78 0.0 0.5 0.2 3.3 90 chr3R 13692787 3` UTR flfl + chr3R 13692832 3` UTR flfl + chr3R 13692877 3` UTR flfl + chr3R_4_13690001 chr3R_13690001 RAL-307_75b 328 chr3R 13863680 13863713 chr3R 13863768 13863801 8 88 1.5 0.5 1.0 4.0 121 chr3R 13863680 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863801 intergenic not near genes chr3R_8_13860001 chr3R_13860001 RAL-307_75b 329 chr3R 13948236 13948242 chr3R 13948314 13948319 4 78 0.5 1.5 1.0 2.0 83 chr3R 13948236 intergenic CG31517 + chr3R 13948278 intergenic CG31517 + chr3R 13948319 intergenic CG31517 + chr3R_4_13945001 chr3R_13945001 RAL-307_75b 330 chr3R 14079846 14079856 chr3R 14079928 14079938 4 82 0.0 0.0 0.0 4.0 92 chr3R 14079846 intron foxo + chr3R 14079892 intron foxo + chr3R 14079938 intron foxo + chr3R_4_14075001 chr3R_14075001 RAL-307_75b 331 chr3R 14091506 14091525 chr3R 14091585 14091604 4 79 1.5 0.0 0.8 2.2 98 chr3R 14091506 intron Npc2b + chr3R 14091555 intron Npc2b + chr3R 14091604 intron Npc2b + chr3R_4_14090001 chr3R_14090001 RAL-307_75b 332 chr3R 14109106 14109112 chr3R 14109187 14109193 4 81 0.5 2.0 1.2 1.8 87 chr3R 14109106 intergenic CR44237 -,Or88a + chr3R 14109150 intergenic CR44237 -,Or88a + chr3R 14109193 intergenic CR44237 -,Or88a + chr3R_4_14105001 chr3R_14105001 RAL-307_75b 333 chr3R 14170155 14170171 chr3R 14170245 14170261 4 90 0.5 1.0 0.8 2.2 106 chr3R 14170155 3` UTR Dop1R1 - chr3R 14170208 3` UTR Dop1R1 - chr3R 14170261 3` UTR Dop1R1 - chr3R_4_14170001 chr3R_14170001 RAL-307_75b 334 chr3R 14534743 14534759 chr3R 14534825 14534841 4 82 2.5 0.5 1.5 1.6 98 chr3R 14534743 intron Pde6 - chr3R 14534792 intron Pde6 - chr3R 14534841 intron Pde6 - chr3R_4_14530001 chr3R_14530001 RAL-307_75b 335 chr3R 14694481 14694489 chr3R 14694561 14694569 4 80 0.0 0.5 0.2 3.3 88 chr3R 14694481 intron Meltrin - chr3R 14694525 intron Meltrin - chr3R 14694569 intron Meltrin - chr3R_4_14690001 chr3R_14690001 RAL-307_75b 336 chr3R 14704408 14704419 chr3R 14704485 14704496 5 77 0.0 0.0 0.0 5.0 88 chr3R 14704408 intron kibra - chr3R 14704452 intron kibra - chr3R 14704496 intron kibra - chr3R_5_14700001 chr3R_14700001 RAL-307_75b 337 chr3R 15114928 15114948 chr3R 15115004 15115025 5 76 1.5 2.0 1.8 1.8 97 chr3R 15114928 intron CG42788 - chr3R 15114976 intron CG42788 - chr3R 15115025 intron CG42788 - chr3R_5_15110001 chr3R_15110001 RAL-307_75b 338 chr3R 15132072 15132085 chr3R 15135132 15135145 Juan 5 3060 4.5 9.0 6.8 0.6 3073 chr3R 15132072 intergenic CG42788 - chr3R 15133608 intergenic not near genes chr3R 15135145 3` UTR CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-307_75b 339 chr3R 15608788 15608811 chr3R 15609017 15609039 4 229 0.5 0.5 0.5 2.7 251 chr3R 15608788 intergenic not near genes chr3R 15608914 intergenic not near genes chr3R 15609039 intergenic not near genes chr3R_4_15605001 chr3R_15605001 RAL-307_75b 340 chr3R 15811504 15811512 chr3R 15811745 15811753 4 240 5.0 1.5 3.2 1.0 249 chr3R 15811504 intron alpha-Man-IIb + chr3R 15811628 intron alpha-Man-IIb + chr3R 15811753 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_4_15810001 chr3R_15810001 RAL-307_75b 341 chr3R 16472580 16472601 chr3R 16472656 16472677 6 76 0.0 1.5 0.8 3.3 97 chr3R 16472580 intergenic Gyc-89Da + chr3R 16472628 5` UTR Gyc-89Da + chr3R 16472677 5` UTR Gyc-89Da + chr3R_6_16470001 chr3R_16470001 RAL-307_75b 342 chr3R 17268673 17268699 chr3R 17268795 17268820 4 122 0.0 0.0 0.0 4.0 147 chr3R 17268673 intergenic not near genes chr3R 17268746 intergenic not near genes chr3R 17268820 intergenic not near genes chr3R_4_17265001 chr3R_17265001 RAL-307_75b 343 chr3R 17571581 17571595 chr3R 17571662 17571676 4 81 0.5 0.5 0.5 2.7 95 chr3R 17571581 intergenic not near genes chr3R 17571628 intergenic not near genes chr3R 17571676 intergenic not near genes chr3R_4_17570001 chr3R_17570001 RAL-307_75b 344 chr3R 17591284 17591318 chr3R 17591720 17591754 F-element 6 436 1.5 0.0 0.8 3.3 470 chr3R 17591284 intergenic not near genes chr3R 17591519 intergenic not near genes chr3R 17591754 intergenic not near genes chr3R_6_17590001 chr3R_17590001 RAL-307_75b 345 chr3R 17899102 17899103 chr3R 17899180 17899181 4 78 1.5 0.0 0.8 2.2 79 chr3R 17899102 intron Rim - chr3R 17899142 intron Rim - chr3R 17899181 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-307_75b 346 chr3R 18281301 18281317 chr3R 18281402 18281418 4 101 0.5 2.0 1.2 1.8 117 chr3R 18281301 intron eIF-1A + chr3R 18281360 intron eIF-1A + chr3R 18281418 intron eIF-1A + chr3R_4_18280001 chr3R_18280001 RAL-307_75b 347 chr3R 18485438 18485459 chr3R 18485540 18485561 5 102 0.5 0.5 0.5 3.3 123 chr3R 18485438 intron fru - chr3R 18485500 intron fru - chr3R 18485561 intron fru - chr3R_5_18485001 chr3R_18485001 RAL-307_75b 348 chr3R 18606502 18606513 chr3R 18610733 18610745 F-element 4 4231 0.0 0.0 0.0 4.0 4243 chr3R 18606502 intron,intron qin +,CG14304 - chr3R 18608624 intron,intron qin +,CG14304 - chr3R 18610745 intron,intron qin +,CG14304 - chr3R_4_18605001 chr3R_18605001 RAL-307_75b 349 chr3R 18812091 18812106 chr3R 18812169 18812184 5 78 1.0 1.0 1.0 2.5 93 chr3R 18812091 intron CG18208 - chr3R 18812138 intron CG18208 - chr3R 18812184 intron CG18208 - chr3R_5_18810001 chr3R_18810001 RAL-307_75b 350 chr3R 19033931 19033939 chr3R 19034009 19034017 5 77 2.5 1.5 2.0 1.7 86 chr3R 19033931 intron CG6026 + chr3R 19033974 intron CG6026 + chr3R 19034017 intron CG6026 + chr3R_5_19030001 chr3R_19030001 RAL-307_75b 351 chr3R 19438369 19438393 chr3R 19438452 19438476 5 83 1.0 0.5 0.8 2.8 107 chr3R 19438369 intron CG31221 + chr3R 19438422 intron CG31221 + chr3R 19438476 intron CG31221 + chr3R_5_19435001 chr3R_19435001 RAL-307_75b 352 chr3R 19793897 19793907 chr3R 19793990 19794000 4 93 0.5 1.5 1.0 2.0 103 chr3R 19793897 intergenic bnl - chr3R 19793948 intergenic bnl - chr3R 19794000 intergenic bnl - chr3R_4_19790001 chr3R_19790001 RAL-307_75b 353 chr3R 19800681 19800700 chr3R 19800758 19800777 4 77 1.0 0.0 0.5 2.7 96 chr3R 19800681 intron bnl - chr3R 19800729 intron bnl - chr3R 19800777 intron bnl - chr3R_4_19800001 chr3R_19800001 RAL-307_75b 354 chr3R 19950045 19950059 chr3R 19950123 19950137 5 78 1.0 1.5 1.2 2.3 92 chr3R 19950045 intron Hs6st - chr3R 19950091 intron Hs6st - chr3R 19950137 intron Hs6st - chr3R_5_19950001 chr3R_19950001 RAL-307_75b 355 chr3R 19953948 19953977 chr3R 19954025 19954054 4 77 1.0 0.0 0.5 2.7 106 chr3R 19953948 intron Hs6st - chr3R 19954001 intron Hs6st - chr3R 19954054 intron Hs6st - chr3R_4_19950001 chr3R_19950001 RAL-307_75b 356 chr3R 20109539 20109570 chr3R 20114745 20114776 copia 4 5206 0.0 0.0 0.0 4.0 5237 chr3R 20109539 intergenic not near genes chr3R 20112158 intergenic not near genes chr3R 20114776 intergenic CG10887 + chr3R_4_20110001 chr3R_20110001 RAL-307_75b 357 chr3R 20365766 20365792 chr3R 20365847 20365872 8 81 0.5 0.5 0.5 5.3 106 chr3R 20365766 intergenic not near genes chr3R 20365819 intergenic not near genes chr3R 20365872 intergenic not near genes chr3R_8_20365001 chr3R_20365001 RAL-307_75b 358 chr3R 20469287 20469461 chr3R 20469386 20469544 4 95 0.5 0.0 0.2 3.3 257 chr3R 20469287 intron Gfrl - chr3R 20469416 intron Gfrl - chr3R 20469544 intron Gfrl - chr3R_4_20465001 chr3R_20465001 RAL-307_75b 359 chr3R 20787438 20787453 chr3R 20787529 20787544 4 91 1.5 0.5 1.0 2.0 106 chr3R 20787438 intron Syp + chr3R 20787491 intron Syp + chr3R 20787544 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-307_75b 360 chr3R 21274388 21274615 chr3R 21274482 21274697 7 92 4.0 2.0 3.0 1.8 309 chr3R 21274388 3` UTR CG3301 - chr3R 21274542 3` UTR CG3301 - chr3R 21274697 intron CG3301 - chr3R_7_21270001 chr3R_21270001 RAL-307_75b 361 chr3R 21520123 21520140 chr3R 21520217 21520234 4 94 1.0 3.0 2.0 1.3 111 chr3R 21520123 intergenic not near genes chr3R 21520178 intergenic not near genes chr3R 21520234 intergenic not near genes chr3R_4_21520001 chr3R_21520001 RAL-307_75b 362 chr3R 21907535 21907536 chr3R 28831801 28831802 7 6924266 5.5 2.0 3.8 1.5 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_7_25365001 chr3R_25365001 RAL-307_75b 363 chr3R 22087573 22087578 chr3R 22087660 22087663 5 87 0.0 0.5 0.2 4.2 90 chr3R 22087573 intron,exon CG5778 -,CG5791 + chr3R 22087618 intron,exon CG5778 -,CG5791 + chr3R 22087663 intron,3` UTR CG5778 -,CG5791 + chr3R_5_22085001 chr3R_22085001 RAL-307_75b 364 chr3R 22503873 22503903 chr3R 22503953 22503983 4 80 0.0 0.5 0.2 3.3 110 chr3R 22503873 intron Octbeta1R + chr3R 22503928 intron Octbeta1R + chr3R 22503983 intron Octbeta1R + chr3R_4_22500001 chr3R_22500001 RAL-307_75b 365 chr3R 22520776 22520783 chr3R 22520863 22520870 4 87 0.0 0.0 0.0 4.0 94 chr3R 22520776 intron CG5346 - chr3R 22520823 intron CG5346 - chr3R 22520870 intron CG5346 - chr3R_4_22520001 chr3R_22520001 RAL-307_75b 366 chr3R 22538449 22538473 chr3R 22538534 22538558 4 85 0.5 1.5 1.0 2.0 109 chr3R 22538449 intron CG5326 - chr3R 22538504 intron CG5326 - chr3R 22538558 intron CG5326 - chr3R_4_22535001 chr3R_22535001 RAL-307_75b 367 chr3R 22580641 22580668 chr3R 22580724 22580745 4 82 0.5 1.5 1.0 2.0 104 chr3R 22580641 intergenic CSN6 +,CG33110 + chr3R 22580693 intergenic CSN6 +,CG33110 + chr3R 22580745 intergenic CSN6 +,CG33110 + chr3R_4_22580001 chr3R_22580001 RAL-307_75b 368 chr3R 22794508 22794542 chr3R 22794585 22794619 14 77 1.5 0.5 1.0 7.0 111 chr3R 22794508 intergenic CG7029 + chr3R 22794564 intergenic not near genes chr3R 22794619 intergenic not near genes chr3R_14_22790001 chr3R_22790001 RAL-307_75b 369 chr3R 22818112 22818126 chr3R 22818201 22818217 5 90 0.0 1.0 0.5 3.3 105 chr3R 22818112 intergenic not near genes chr3R 22818164 intergenic not near genes chr3R 22818217 intergenic not near genes chr3R_5_22815001 chr3R_22815001 RAL-307_75b 370 chr3R 22836468 22836491 chr3R 22836622 22836645 5 154 0.5 0.0 0.2 4.2 177 chr3R 22836468 intergenic not near genes chr3R 22836556 intergenic not near genes chr3R 22836645 intergenic not near genes chr3R_5_22835001 chr3R_22835001 RAL-307_75b 371 chr3R 23176290 23176298 chr3R 23176861 23176869 4 571 2.5 0.0 1.2 1.8 579 chr3R 23176290 intron Irk1 + chr3R 23176580 intron Irk1 + chr3R 23176869 intron Irk1 + chr3R_4_23175001 chr3R_23175001 RAL-307_75b 372 chr3R 23688484 23688490 chr3R 23688575 23688581 4 91 0.5 0.5 0.5 2.7 97 chr3R 23688484 intergenic SPE + chr3R 23688532 intergenic SPE +,CG10254 - chr3R 23688581 intergenic CG10254 -,SPE + chr3R_4_23685001 chr3R_23685001 RAL-307_75b 373 chr3R 23949049 23949067 chr3R 23949126 23949144 4 76 0.0 0.5 0.2 3.3 95 chr3R 23949049 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949144 intergenic not near genes chr3R_4_23945001 chr3R_23945001 RAL-307_75b 374 chr3R 24076919 24076940 chr3R 24078386 24078407 hobo 5 1467 1.0 0.5 0.8 2.8 1488 chr3R 24076919 intron 4EHP - chr3R 24077663 intron 4EHP - chr3R 24078407 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-307_75b 375 chr3R 24199737 24199753 chr3R 24199817 24199833 4 80 1.0 1.0 1.0 2.0 96 chr3R 24199737 intron twin - chr3R 24199785 intron twin - chr3R 24199833 intron twin - chr3R_4_24195001 chr3R_24195001 RAL-307_75b 376 chr3R 24495304 24495309 chr3R 24495381 24495385 4 78 4.0 1.0 2.5 1.1 81 chr3R 24495304 intergenic not near genes chr3R 24495344 intergenic not near genes chr3R 24495385 intergenic not near genes chr3R_4_24495001 chr3R_24495001 RAL-307_75b 377 chr3R 24670066 24670164 chr3R 24670176 24670248 5 105 0.0 0.0 0.0 5.0 182 chr3R 24670066 intron slo + chr3R 24670157 intron slo + chr3R 24670248 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-307_75b 378 chr3R 24764385 24764403 chr3R 24764468 24764486 6 82 0.5 0.0 0.2 5.0 101 chr3R 24764385 intron AstA - chr3R 24764436 intron AstA - chr3R 24764486 intron AstA - chr3R_6_24760001 chr3R_24760001 RAL-307_75b 379 chr3R 25018264 25018279 chr3R 25018341 25018356 7 76 2.5 0.0 1.2 3.2 92 chr3R 25018264 exon tnc + chr3R 25018310 exon tnc + chr3R 25018356 exon tnc + chr3R_7_25015001 chr3R_25015001 RAL-307_75b 380 chr3R 25027547 25027562 chr3R 25027760 25027773 4 212 0.5 0.5 0.5 2.7 226 chr3R 25027547 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027773 intron Hr96 + chr3R_4_25025001 chr3R_25025001 RAL-307_75b 381 chr3R 25302681 25302711 chr3R 25302930 25302960 5 249 2.5 1.5 2.0 1.7 279 chr3R 25302681 exon CG31370 + chr3R 25302820 exon CG31370 + chr3R 25302960 exon CG31370 + chr3R_5_25300001 chr3R_25300001 RAL-307_75b 382 chr3R 25832713 25832724 chr3R 25841895 25841906 roo 5 9182 1.0 1.5 1.2 2.3 9193 chr3R 25832713 exon alpha4GT2 + chr3R 25837310 intron alpha4GT2 + chr3R 25841906 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-307_75b 383 chr3R 25871113 25871127 chr3R 25871248 25871261 5 135 1.5 0.0 0.8 2.8 148 chr3R 25871113 3` UTR CG5890 + chr3R 25871187 3` UTR CG5890 + chr3R 25871261 3` UTR CG5890 + chr3R_5_25870001 chr3R_25870001 RAL-307_75b 384 chr3R 25983699 25983709 chr3R 25983796 25983807 5 98 0.5 1.0 0.8 2.8 108 chr3R 25983699 exon Nf1 + chr3R 25983753 intron Nf1 + chr3R 25983807 intron Nf1 + chr3R_5_25980001 chr3R_25980001 RAL-307_75b 385 chr3R 26332884 26332907 chr3R 26332973 26332996 5 89 1.5 1.5 1.5 2.0 112 chr3R 26332884 intron CG33970 + chr3R 26332940 intron CG33970 + chr3R 26332996 intron CG33970 + chr3R_5_26330001 chr3R_26330001 RAL-307_75b 386 chr3R 26376330 26376358 chr3R 26385490 26385515 roo 5 9159 0.5 0.0 0.2 4.2 9185 chr3R 26376330 intergenic not near genes chr3R 26380922 intergenic not near genes chr3R 26385515 intergenic not near genes chr3R_5_26380001 chr3R_26380001 RAL-307_75b 387 chr3R 26387322 26387344 chr3R 26387399 26387421 5 77 1.0 0.5 0.8 2.8 99 chr3R 26387322 intergenic not near genes chr3R 26387372 intergenic not near genes chr3R 26387421 intergenic not near genes chr3R_5_26385001 chr3R_26385001 RAL-307_75b 388 chr3R 27007413 27007425 chr3R 27016548 27016560 roo 5 9135 0.0 0.5 0.2 4.2 9147 chr3R 27007413 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016560 intron RYa-R + chr3R_5_27010001 chr3R_27010001 RAL-307_75b 389 chr3R 27028724 27028748 chr3R 27028803 27028827 4 79 3.5 0.0 1.8 1.4 103 chr3R 27028724 intron RYa-R + chr3R 27028776 intron RYa-R + chr3R 27028827 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-307_75b 390 chr3R 27034777 27034805 chr3R 27034861 27034889 4 84 0.0 0.0 0.0 4.0 112 chr3R 27034777 intron RYa-R + chr3R 27034833 intron RYa-R + chr3R 27034889 intron RYa-R + chr3R_4_27030001 chr3R_27030001 RAL-307_75b 391 chr3R 27071414 27071435 chr3R 27071730 27071751 6 316 0.5 0.5 0.5 4.0 337 chr3R 27071414 intergenic not near genes chr3R 27071582 intergenic not near genes chr3R 27071751 intergenic not near genes chr3R_6_27070001 chr3R_27070001 RAL-307_75b 392 chr3R 27140523 27140540 chr3R 27148132 27148150 412 6 7610 2.0 1.0 1.5 2.4 7627 chr3R 27140523 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148150 intron CG6051 - chr3R_6_27140001 chr3R_27140001 RAL-307_75b 393 chr3R 27303556 27303559 chr3R 27303644 27303647 5 88 1.0 0.0 0.5 3.3 91 chr3R 27303556 intron CG3339 - chr3R 27303602 intron CG3339 - chr3R 27303647 intron CG3339 - chr3R_5_27300001 chr3R_27300001 RAL-307_75b 394 chr3R 27521165 27521190 chr3R 27530374 27530399 roo 5 9209 0.5 2.0 1.2 2.3 9234 chr3R 27521165 intron CG12885 + chr3R 27525782 intron CG12885 + chr3R 27530399 intron CG12885 + chr3R_5_27525001 chr3R_27525001 RAL-307_75b 395 chr3R 27570272 27570299 chr3R 27570357 27570384 6 85 1.0 0.5 0.8 3.3 112 chr3R 27570272 intron wdb - chr3R 27570328 intron wdb - chr3R 27570384 intron wdb - chr3R_6_27570001 chr3R_27570001 RAL-307_75b 396 chr3R 27574100 27574133 chr3R 27574499 27574532 5 399 1.0 0.5 0.8 2.8 432 chr3R 27574100 intron wdb - chr3R 27574316 intron wdb - chr3R 27574532 intron wdb - chr3R_5_27570001 chr3R_27570001 RAL-307_75b 397 chr3R 27725567 27725597 chr3R 27731009 27731039 I-element 4 5442 0.5 2.5 1.5 1.6 5472 chr3R 27725567 intergenic not near genes chr3R 27728303 intergenic not near genes chr3R 27731039 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-307_75b 398 chr3R 27799762 27799772 chr3R 27800140 27800150 7 378 0.0 2.5 1.2 3.2 388 chr3R 27799762 intron CG34353 - chr3R 27799956 intron CG34353 - chr3R 27800150 intron CG34353 - chr3R_7_27795001 chr3R_27795001 RAL-307_75b 399 chr3R 27856757 27856792 chr3R 27858240 27858275 hopper2 7 1483 0.0 2.0 1.0 3.5 1518 chr3R 27856757 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858275 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-307_75b 400 chr3R 28302110 28302134 chr3R 28302549 28302573 jockey 6 439 1.0 1.5 1.2 2.7 463 chr3R 28302110 intergenic not near genes chr3R 28302342 intergenic not near genes chr3R 28302573 intergenic not near genes chr3R_6_28300001 chr3R_28300001 RAL-307_75b 401 chr3R 28599376 28599379 chr3R 28599523 28599526 6 146 0.5 0.5 0.5 4.0 150 chr3R 28599376 intergenic Noa36 - chr3R 28599451 intergenic Noa36 - chr3R 28599526 intergenic Noa36 - chr3R_6_28595001 chr3R_28595001 RAL-307_75b 402 chr3R 21907535 21907536 chr3R 28831802 28831802 4 6924267 5.5 2.0 3.8 0.8 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_4_25365001 chr3R_25365001 RAL-307_75b 403 chr3R 28960508 28960531 chr3R 28960593 28960616 4 85 0.5 0.5 0.5 2.7 108 chr3R 28960508 intron CG14521 - chr3R 28960562 intron CG14521 - chr3R 28960616 intron CG14521 - chr3R_4_28960001 chr3R_28960001 RAL-307_75b 404 chr3R 28989011 28989019 chr3R 28989089 28989098 4 79 0.0 0.0 0.0 4.0 87 chr3R 28989011 intergenic not near genes chr3R 28989054 intergenic not near genes chr3R 28989098 intergenic not near genes chr3R_4_28985001 chr3R_28985001 RAL-307_75b 405 chr3R 29049179 29049192 chr3R 29049260 29049273 5 81 1.0 0.5 0.8 2.8 94 chr3R 29049179 intergenic Pkc98E +,CG11837 + chr3R 29049226 intergenic Pkc98E +,CG11837 + chr3R 29049273 intergenic Pkc98E +,CG11837 + chr3R_5_29045001 chr3R_29045001 RAL-307_75b 406 chr3R 29472012 29472037 chr3R 29472105 29472130 4 93 1.0 2.0 1.5 1.6 118 chr3R 29472012 intron Ptp99A + chr3R 29472071 intron Ptp99A + chr3R 29472130 intron Ptp99A + chr3R_4_29470001 chr3R_29470001 RAL-307_75b 407 chr3R 29474434 29474460 chr3R 29474521 29474547 5 87 0.5 1.0 0.8 2.8 113 chr3R 29474434 intron Ptp99A + chr3R 29474490 intron Ptp99A + chr3R 29474547 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-307_75b 408 chr3R 29624957 29624987 chr3R 29625033 29625063 5 76 2.0 2.0 2.0 1.7 106 chr3R 29624957 intergenic not near genes chr3R 29625010 intergenic not near genes chr3R 29625063 intergenic not near genes chr3R_5_29625001 chr3R_29625001 RAL-307_75b 409 chr3R 29758951 29758968 chr3R 29759029 29759046 9 78 0.5 1.5 1.0 4.5 95 chr3R 29758951 3` UTR CR44953 - chr3R 29758998 3` UTR CR44953 - chr3R 29759046 intergenic CR44953 - chr3R_9_29755001 chr3R_29755001 RAL-307_75b 410 chr3R 29760365 29760380 chr3R 29761566 29761581 pogo 4 1200 0.5 0.0 0.2 3.3 1216 chr3R 29760365 intergenic not near genes chr3R 29760973 intergenic not near genes chr3R 29761581 intergenic not near genes chr3R_4_29760001 chr3R_29760001 RAL-307_75b 411 chr3R 29882019 29882047 chr3R 29891176 29891204 roo 5 9157 0.0 2.0 1.0 2.5 9185 chr3R 29882019 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891204 intron CG31038 + chr3R_5_29885001 chr3R_29885001 RAL-307_75b 412 chr3R 29950580 29950594 chr3R 29950657 29950670 4 76 1.5 0.5 1.0 2.0 90 chr3R 29950580 intergenic TkR99D - chr3R 29950625 intergenic TkR99D - chr3R 29950670 intergenic TkR99D - chr3R_4_29950001 chr3R_29950001 RAL-307_75b 413 chr3R 30182770 30182788 chr3R 30182909 30182927 6 139 0.0 2.0 1.0 3.0 157 chr3R 30182770 intergenic not near genes chr3R 30182848 intergenic not near genes chr3R 30182927 intergenic not near genes chr3R_6_30180001 chr3R_30180001 RAL-307_75b 414 chr3R 30480489 30480510 chr3R 30482957 30482978 jockey 4 2468 0.5 0.0 0.2 3.3 2489 chr3R 30480489 intron PH4alphaEFB + chr3R 30481734 intron PH4alphaEFB + chr3R 30482978 intron PH4alphaEFB + chr3R_4_30480001 chr3R_30480001 RAL-307_75b 415 chr3R 30498411 30498435 chr3R 30498610 30498635 5 200 0.0 2.0 1.0 2.5 224 chr3R 30498411 intron PH4alphaNE1 - chr3R 30498523 intron PH4alphaNE1 - chr3R 30498635 intron PH4alphaNE1 - chr3R_5_30495001 chr3R_30495001 RAL-307_75b 416 chr3R 30689539 30689554 chr3R 30689618 30689633 8 79 1.0 2.0 1.5 3.2 94 chr3R 30689539 intergenic not near genes chr3R 30689586 intergenic not near genes chr3R 30689633 intergenic not near genes chr3R_8_30685001 chr3R_30685001 RAL-307_75b 417 chr3R 30801459 30801471 chr3R 30801572 30801583 4 112 2.5 0.0 1.2 1.8 124 chr3R 30801459 intron wts - chr3R 30801521 intron wts - chr3R 30801583 intron wts - chr3R_4_30800001 chr3R_30800001 RAL-307_75b 418 chr3R 31047215 31047231 chr3R 31047509 31047525 4 294 1.0 0.5 0.8 2.2 310 chr3R 31047215 intergenic CanA1 + chr3R 31047370 intergenic not near genes chr3R 31047525 intergenic not near genes chr3R_4_31045001 chr3R_31045001 RAL-307_75b 419 chr3R 31074230 31074257 chr3R 31081828 31081855 springer 7 7598 1.0 1.5 1.2 3.2 7625 chr3R 31074230 intron Sox100B + chr3R 31078042 intron Sox100B + chr3R 31081855 intron Sox100B + chr3R_7_31075001 chr3R_31075001 RAL-307_75b 420 chr3R 31161408 31161426 chr3R 31161922 31161940 4 514 0.5 0.0 0.2 3.3 532 chr3R 31161408 intron,intron Gycbeta100B +,stops - chr3R 31161674 intron,intron Gycbeta100B +,stops - chr3R 31161940 intron,intron Gycbeta100B +,stops - chr3R_4_31160001 chr3R_31160001 RAL-307_75b 421 chr3R 31435364 31435389 chr3R 31435516 31435541 5 152 2.5 0.0 1.2 2.3 177 chr3R 31435364 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435541 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 RAL-307_75b 422 chr3R 31691545 31691563 chr3R 31696311 31696329 Doc 6 4766 2.0 2.5 2.2 1.9 4784 chr3R 31691545 intergenic not near genes chr3R 31693937 intergenic not near genes chr3R 31696329 intergenic not near genes chr3R_6_31690001 chr3R_31690001 RAL-307_75b 423 chrX 388244 388266 chrX 390591 390613 4 2347 7.0 4.0 5.5 0.6 2369 chrX 388244 intron CG32816 - chrX 389428 intron CG32816 - chrX 390613 intron CG32816 - chrX_4_385001 chrX_385001 RAL-307_75b 424 chrX 494632 494635 chrX 494724 494727 4 92 0.0 1.0 0.5 2.7 95 chrX 494632 5` UTR CG17778 + chrX 494680 5` UTR CG17778 + chrX 494727 intron CG17778 + chrX_4_490001 chrX_490001 RAL-307_75b 425 chrX 802295 802300 chrX 802372 802377 4 77 0.5 1.0 0.8 2.2 82 chrX 802295 exon CG13359 - chrX 802336 exon CG13359 - chrX 802377 exon CG13359 - chrX_4_800001 chrX_800001 RAL-307_75b 426 chrX 1053117 1053123 chrX 16983076 16983076 4 15929957 3.5 1.0 2.2 1.2 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-307_75b 427 chrX 1151786 1151804 chrX 1152051 1152069 6 265 0.5 0.0 0.2 5.0 283 chrX 1151786 intergenic not near genes chrX 1151928 intergenic not near genes chrX 1152069 intergenic not near genes chrX_6_1150001 chrX_1150001 RAL-307_75b 428 chrX 1845743 1845747 chrX 1845843 1845847 5 100 0.0 1.5 0.8 2.8 104 chrX 1845743 intron CG42666 + chrX 1845795 intron CG42666 + chrX 1845847 intron CG42666 + chrX_5_1845001 chrX_1845001 RAL-307_75b 429 chrX 2394281 2394291 chrX 2394363 2394373 4 82 1.0 0.0 0.5 2.7 92 chrX 2394281 intergenic not near genes chrX 2394327 intergenic not near genes chrX 2394373 intergenic not near genes chrX_4_2390001 chrX_2390001 RAL-307_75b 430 chrX 2568202 2568224 chrX 2568450 2568472 7 248 0.0 0.5 0.2 5.8 270 chrX 2568202 intron Pdfr + chrX 2568337 intron Pdfr + chrX 2568472 intron Pdfr + chrX_7_2565001 chrX_2565001 RAL-307_75b 431 chrX 2664385 2664399 chrX 2665531 2665545 1360 4 1146 0.5 0.5 0.5 2.7 1160 chrX 2664385 intron sgg + chrX 2664965 intron sgg + chrX 2665545 intron sgg + chrX_4_2660001 chrX_2660001 RAL-307_75b 432 chrX 3075644 3075654 chrX 3080949 3080960 Transpac 4 5306 0.5 1.5 1.0 2.0 5316 chrX 3075644 intron kirre + chrX 3078302 intron kirre + chrX 3080960 intron kirre + chrX_4_3075001 chrX_3075001 RAL-307_75b 433 chrX 4202006 4202032 chrX 4202084 4202110 5 78 1.0 1.0 1.0 2.5 104 chrX 4202006 intron Fas2 - chrX 4202058 intron Fas2 - chrX 4202110 intron Fas2 - chrX_5_4200001 chrX_4200001 RAL-307_75b 434 chrX 4827978 4828000 chrX 4835348 4835371 Stalker4 7 7371 0.0 1.5 0.8 3.9 7393 chrX 4827978 intergenic not near genes chrX 4831674 intergenic not near genes chrX 4835371 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-307_75b 435 chrX 5134817 5134829 chrX 5134918 5134930 4 101 0.5 0.5 0.5 2.7 113 chrX 5134817 intron,intron CG15465 +,rg + chrX 5134874 intron,intron CG15465 +,rg + chrX 5134930 intron,intron CG15465 +,rg + chrX_4_5130001 chrX_5130001 RAL-307_75b 436 chrX 5189274 5189285 chrX 5189370 5189381 5 96 1.0 1.5 1.2 2.3 107 chrX 5189274 intron,intron CG15465 +,rg + chrX 5189328 intron,intron CG15465 +,rg + chrX 5189381 intron,intron CG15465 +,rg + chrX_5_5185001 chrX_5185001 RAL-307_75b 437 chrX 5349277 5349307 chrX 5349354 5349384 9 77 0.0 1.0 0.5 6.0 107 chrX 5349277 intron SK + chrX 5349330 intron SK + chrX 5349384 intron SK + chrX_9_5345001 chrX_5345001 RAL-307_75b 438 chrX 5473593 5473602 chrX 5473667 5473678 4 75 0.0 1.0 0.5 2.7 85 chrX 5473593 intron SPR + chrX 5473636 intron SPR + chrX 5473678 intron SPR + chrX_4_5470001 chrX_5470001 RAL-307_75b 439 chrX 6003283 6003308 chrX 6003364 6003389 5 81 0.0 1.0 0.5 3.3 106 chrX 6003283 intron CR44498 + chrX 6003336 intron CR44498 + chrX 6003389 intron CR44498 + chrX_5_6000001 chrX_6000001 RAL-307_75b 440 chrX 6171583 6171608 chrX 6179016 6179041 Quasimodo 6 7432 1.0 0.0 0.5 4.0 7458 chrX 6171583 intron Ca-alpha1T - chrX 6175312 intron Ca-alpha1T - chrX 6179041 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-307_75b 441 chrX 6306555 6306569 chrX 6306632 6306646 4 76 0.0 2.0 1.0 2.0 91 chrX 6306555 3` UTR CG3823 + chrX 6306600 3` UTR CG3823 + chrX 6306646 3` UTR CG3823 + chrX_4_6305001 chrX_6305001 RAL-307_75b 442 chrX 6392863 6392894 chrX 6397628 6397659 Doc 6 4765 1.5 0.0 0.8 3.3 4796 chrX 6392863 intergenic not near genes chrX 6395261 intergenic not near genes chrX 6397659 intergenic not near genes chrX_6_6395001 chrX_6395001 RAL-307_75b 443 chrX 6539921 6539922 chrX 6540023 6540024 4 102 1.0 1.0 1.0 2.0 103 chrX 6539921 intergenic not near genes chrX 6539972 intergenic not near genes chrX 6540024 intergenic not near genes chrX_4_6535001 chrX_6535001 RAL-307_75b 444 chrX 6901825 6901835 chrX 6901934 6901944 5 109 2.0 2.0 2.0 1.7 119 chrX 6901825 intergenic not near genes chrX 6901884 intergenic not near genes chrX 6901944 intergenic not near genes chrX_5_6900001 chrX_6900001 RAL-307_75b 445 chrX 7023602 7023627 chrX 7030992 7031016 Tabor 6 7390 1.0 1.5 1.2 2.7 7414 chrX 7023602 intron CG12541 - chrX 7027309 intron CG12541 - chrX 7031016 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-307_75b 446 chrX 7069811 7069833 chrX 7069891 7069911 4 80 0.0 0.0 0.0 4.0 100 chrX 7069811 5` UTR CG4607 + chrX 7069861 5` UTR CG4607 + chrX 7069911 5` UTR CG4607 + chrX_4_7065001 chrX_7065001 RAL-307_75b 447 chrX 7680119 7680136 chrX 7680201 7680218 5 82 0.5 3.0 1.8 1.8 99 chrX 7680119 3` UTR CR45666 - chrX 7680168 3` UTR CR45666 - chrX 7680218 3` UTR CR45666 - chrX_5_7680001 chrX_7680001 RAL-307_75b 448 chrX 7702912 7702929 chrX 7703351 7703368 jockey 5 439 0.5 1.5 1.0 2.5 456 chrX 7702912 intron CHES-1-like - chrX 7703140 intron CHES-1-like - chrX 7703368 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-307_75b 449 chrX 8092291 8092323 chrX 8092376 8092408 5 85 1.0 0.0 0.5 3.3 117 chrX 8092291 intron Ubc-E2H - chrX 8092350 intron Ubc-E2H - chrX 8092408 intron Ubc-E2H - chrX_5_8090001 chrX_8090001 RAL-307_75b 450 chrX 8364855 8364873 chrX 8365252 8365270 BS 5 396 0.5 0.5 0.5 3.3 415 chrX 8364855 intron nAChRalpha3 - chrX 8365062 intron nAChRalpha3 - chrX 8365270 intron nAChRalpha3 - chrX_5_8365001 chrX_8365001 RAL-307_75b 451 chrX 8922339 8922360 chrX 8922773 8922794 jockey 4 434 0.0 0.5 0.2 3.3 455 chrX 8922339 intron rdgA + chrX 8922566 intron rdgA + chrX 8922794 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-307_75b 452 chrX 9275998 9276026 chrX 9276107 9276135 5 109 0.5 0.0 0.2 4.2 137 chrX 9275998 3` UTR c11.1 - chrX 9276066 3` UTR c11.1 - chrX 9276135 exon c11.1 - chrX_5_9275001 chrX_9275001 RAL-307_75b 453 chrX 9337942 9337966 chrX 9338034 9338058 4 92 0.0 0.0 0.0 4.0 116 chrX 9337942 intron CG34449 - chrX 9338000 intron CG34449 - chrX 9338058 exon CG34449 - chrX_4_9335001 chrX_9335001 RAL-307_75b 454 chrX 9508155 9508156 chrX 9509673 9509674 jockey 4 1518 1.5 0.5 1.0 2.0 1519 chrX 9508155 intron CG32700 - chrX 9508914 intron CG32700 - chrX 9509674 intron CG32700 - chrX_4_9505001 chrX_9505001 RAL-307_75b 455 chrX 9575791 9575817 chrX 9576114 9576141 mdg3 4 324 4.0 1.5 2.8 1.1 350 chrX 9575791 intron,exon CG32699 -,CG42395 - chrX 9575966 intron,intron CG32699 -,CG42395 - chrX 9576141 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-307_75b 456 chrX 9923390 9923417 chrX 9923481 9923508 4 91 0.5 0.0 0.2 3.3 118 chrX 9923390 intergenic not near genes chrX 9923449 intergenic not near genes chrX 9923508 intergenic not near genes chrX_4_9920001 chrX_9920001 RAL-307_75b 457 chrX 10046096 10046112 chrX 10046172 10046187 6 76 0.5 0.0 0.2 5.0 91 chrX 10046096 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX 10046142 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX 10046187 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX_6_10045001 chrX_10045001 RAL-307_75b 458 chrX 10550870 10550878 chrX 10552336 10552345 hobo 5 1467 1.0 0.5 0.8 2.8 1475 chrX 10550870 intron spri - chrX 10551608 intron spri - chrX 10552345 intron spri - chrX_5_10550001 chrX_10550001 RAL-307_75b 459 chrX 11165885 11165898 chrX 11166217 11166229 4 331 1.5 0.0 0.8 2.2 344 chrX 11165885 intergenic not near genes chrX 11166057 intergenic not near genes chrX 11166229 intergenic not near genes chrX_4_11165001 chrX_11165001 RAL-307_75b 460 chrX 11268560 11268590 chrX 11270053 11270083 hopper2 5 1493 0.5 0.5 0.5 3.3 1523 chrX 11268560 intron CG44422 - chrX 11269322 intron CG44422 - chrX 11270083 intron CG44422 - chrX_5_11265001 chrX_11265001 RAL-307_75b 461 chrX 12356863 12356881 chrX 12356975 12356993 4 112 0.0 1.5 0.8 2.2 130 chrX 12356863 intergenic not near genes chrX 12356928 intergenic not near genes chrX 12356993 intergenic not near genes chrX_4_12355001 chrX_12355001 RAL-307_75b 462 chrX 14209463 14209479 chrX 14209554 14209570 4 91 2.0 1.5 1.8 1.4 107 chrX 14209463 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209516 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209570 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-307_75b 463 chrX 14508463 14508479 chrX 14508600 14508616 4 136 0.0 0.0 0.0 4.0 153 chrX 14508463 intergenic not near genes chrX 14508540 intergenic not near genes chrX 14508616 intergenic not near genes chrX_4_14505001 chrX_14505001 RAL-307_75b 464 chrX 15228514 15228525 chrX 15228760 15228771 4 246 1.0 1.5 1.2 1.8 257 chrX 15228514 intergenic CG9101 - chrX 15228642 intergenic CG9101 - chrX 15228771 3` UTR CG9101 - chrX_4_15225001 chrX_15225001 RAL-307_75b 465 chrX 15277647 15277654 chrX 15277732 15277737 5 84 1.5 0.5 1.0 2.5 90 chrX 15277647 intergenic not near genes chrX 15277692 intergenic not near genes chrX 15277737 intergenic not near genes chrX_5_15275001 chrX_15275001 RAL-307_75b 466 chrX 15681408 15681424 chrX 15681490 15681506 6 82 0.5 0.0 0.2 5.0 98 chrX 15681408 intergenic not near genes chrX 15681457 intergenic not near genes chrX 15681506 intergenic not near genes chrX_6_15680001 chrX_15680001 RAL-307_75b 467 chrX 16880158 16880164 chrX 16880249 16880255 4 91 0.0 0.0 0.0 4.0 97 chrX 16880158 intergenic not near genes chrX 16880206 intergenic not near genes chrX 16880255 intergenic not near genes chrX_4_16880001 chrX_16880001 RAL-307_75b 468 chrX 17195206 17195221 chrX 17200292 17200307 flea 4 5086 1.5 2.5 2.0 1.3 5101 chrX 17195206 3` UTR baz + chrX 17197756 3` UTR baz + chrX 17200307 3` UTR baz + chrX_4_17195001 chrX_17195001 RAL-307_75b 469 chrX 17867058 17867078 chrX 17867134 17867154 5 76 0.5 0.0 0.2 4.2 96 chrX 17867058 intron mnb - chrX 17867106 intron mnb - chrX 17867154 intron mnb - chrX_5_17865001 chrX_17865001 RAL-307_75b 470 chrX 18427380 18427389 chrX 18427791 18427800 4 411 1.0 0.5 0.8 2.2 420 chrX 18427380 intergenic CG42323 + chrX 18427590 intergenic not near genes chrX 18427800 intergenic not near genes chrX_4_18425001 chrX_18425001 RAL-307_75b 471 chrX 18836651 18836672 chrX 18836744 18836765 6 93 0.5 0.5 0.5 4.0 114 chrX 18836651 intron Pvf1 + chrX 18836708 intron Pvf1 + chrX 18836765 intron Pvf1 + chrX_6_18835001 chrX_18835001 RAL-307_75b 472 chrX 19109110 19109139 chrX 19109294 19109323 5 184 0.0 1.5 0.8 2.8 213 chrX 19109110 intergenic not near genes chrX 19109216 intergenic not near genes chrX 19109323 intergenic not near genes chrX_5_19105001 chrX_19105001 RAL-307_75b 473 chrX 13057298 13057300 chrX 19242812 19242814 8 6185514 1.0 3.5 2.2 2.5 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_8_16150001 chrX_16150001 RAL-307_75b 474 chrX 19472131 19472156 chrX 19472701 19472726 jockey 5 570 1.0 1.0 1.0 2.5 595 chrX 19472131 intergenic kek5 + chrX 19472428 intergenic not near genes chrX 19472726 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-307_75b 475 chrX 19710073 19710101 chrX 19711859 19711886 S-element 4 1786 1.0 1.5 1.2 1.8 1813 chrX 19710073 intron meso18E - chrX 19710980 intron meso18E - chrX 19711886 intron meso18E - chrX_4_19710001 chrX_19710001 RAL-307_75b 476 chrX 20528604 20528612 chrX 20528952 20528960 7 348 0.5 0.0 0.2 5.8 356 chrX 20528604 intergenic not near genes chrX 20528782 intergenic not near genes chrX 20528960 intergenic not near genes chrX_7_20525001 chrX_20525001 RAL-307_75b 477 chrX 21264730 21264748 chrX 21264806 21264824 4 76 1.0 2.5 1.8 1.4 94 chrX 21264730 intron CG32521 - chrX 21264777 intron CG32521 - chrX 21264824 intron CG32521 - chrX_4_21260001 chrX_21260001 RAL-307_75b 478 chrX 21458694 21458722 chrX 21464130 21464158 Ivk 4 5436 0.0 1.0 0.5 2.7 5464 chrX 21458694 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464158 intergenic not near genes chrX_4_21460001 chrX_21460001 RAL-307_75b 479 chrX 21668258 21668285 chrX 21668343 21668370 4 85 1.0 1.5 1.2 1.8 112 chrX 21668258 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668370 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-307_75b