SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46303 46377 chr2L 46430 46505 25 127 7.5 9.5 8.5 2.6 202 chr2L 46303 intron Cda5 - chr2L 46404 intron Cda5 - chr2L 46505 intron Cda5 - chr2L_25_45001 chr2L_45001 RAL-307_125b 2 chr2L 47428 47442 chr2L 52576 52597 jockey 11 5154 32.0 16.0 24.0 0.4 5169 chr2L 47428 intron Cda5 - chr2L 50012 intron Cda5 - chr2L 52597 intron Cda5 - chr2L_11_50001 chr2L_50001 RAL-307_125b 3 chr2L 47443 47446 chr2L 52572 52601 jockey 6 5150 30.5 15.5 23.0 0.2 5158 chr2L 47443 intron Cda5 - chr2L 50022 intron Cda5 - chr2L 52601 intron Cda5 - chr2L_6_50001 chr2L_50001 RAL-307_125b 4 chr2L 47447 47485 chr2L 52570 52599 jockey 21 5149 18.0 15.0 16.5 1.2 5152 chr2L 47447 intron Cda5 - chr2L 50023 intron Cda5 - chr2L 52599 intron Cda5 - chr2L_21_50001 chr2L_50001 RAL-307_125b 5 chr2L 126904 126969 chr2L 127027 127074 34 128 13.5 13.5 13.5 2.3 170 chr2L 126904 intron,intron CG11455 +,CG3164 - chr2L 126989 intron,intron CG11455 +,CG3164 - chr2L 127074 intron,intron CG11455 +,CG3164 - chr2L_34_125001 chr2L_125001 RAL-307_125b 6 chr2L 135558 135615 chr2L 135684 135741 8 121 17.5 15.0 16.2 0.5 183 chr2L 135558 intron,5` UTR CG11455 +,CR44185 + chr2L 135650 intron,5` UTR CG11455 +,CR44185 + chr2L 135741 intron,5` UTR CG11455 +,CR44185 + chr2L_8_135001 chr2L_135001 RAL-307_125b 7 chr2L 224685 224743 chr2L 225003 225043 11 318 5.5 5.5 5.5 1.7 358 chr2L 224685 intron,5` UTR kis -,CR44222 + chr2L 224864 intron kis - chr2L 225043 intron kis - chr2L_11_220001 chr2L_220001 RAL-307_125b 8 chr2L 287197 287256 chr2L 287328 287387 29 130 14.0 9.0 11.5 2.3 190 chr2L 287197 intron CG3625 - chr2L 287292 intron,3` UTR CG3625 -,Amnionless - chr2L 287387 intron,3` UTR CG3625 -,Amnionless - chr2L_29_285001 chr2L_285001 RAL-307_125b 9 chr2L 347841 347915 chr2L 355391 355453 blood 34 7548 14.0 9.0 11.5 2.7 7612 chr2L 347841 3` UTR Plc21C + chr2L 351647 intron Plc21C + chr2L 355453 3` UTR Plc21C + chr2L_34_350001 chr2L_350001 RAL-307_125b 10 chr2L 467318 467355 chr2L 467467 467504 23 149 19.0 22.5 20.8 1.1 186 chr2L 467318 intron CG4297 - chr2L 467411 intron CG4297 - chr2L 467504 intron CG4297 - chr2L_23_465001 chr2L_465001 RAL-307_125b 11 chr2L 597061 597075 chr2L 597189 597203 6 128 18.0 8.0 13.0 0.4 142 chr2L 597061 intergenic not near genes chr2L 597132 intergenic not near genes chr2L 597203 intergenic not near genes chr2L_6_595001 chr2L_595001 RAL-307_125b 12 chr2L 597077 597138 chr2L 597187 597246 7 118 8.5 7.5 8.0 0.8 169 chr2L 597077 intergenic not near genes chr2L 597162 intergenic not near genes chr2L 597246 intergenic not near genes chr2L_7_595001 chr2L_595001 RAL-307_125b 13 chr2L 604931 605004 chr2L 605069 605119 15 131 7.5 5.0 6.2 2.1 188 chr2L 604931 intergenic not near genes chr2L 605025 intergenic not near genes chr2L 605119 intergenic not near genes chr2L_15_605001 chr2L_605001 RAL-307_125b 14 chr2L 686912 686941 chr2L 695958 696031 roo 14 9082 5.5 7.0 6.2 1.9 9119 chr2L 686912 intron ds - chr2L 691472 intron ds - chr2L 696031 intron ds - chr2L_14_690001 chr2L_690001 RAL-307_125b 15 chr2L 764509 764568 chr2L 764659 764718 21 149 6.0 6.5 6.2 2.9 209 chr2L 764509 intergenic not near genes chr2L 764614 intergenic not near genes chr2L 764718 intergenic not near genes chr2L_21_760001 chr2L_760001 RAL-307_125b 16 chr2L 770425 770481 chr2L 772251 772300 Bari1 17 1825 9.0 6.5 7.8 1.9 1875 chr2L 770425 intergenic not near genes chr2L 771362 intergenic not near genes chr2L 772300 intergenic CR44614 + chr2L_17_770001 chr2L_770001 RAL-307_125b 17 chr2L 781054 781099 chr2L 781141 781238 12 127 0.0 0.0 0.0 12.0 184 chr2L 781054 5` UTR Gr21a + chr2L 781146 5` UTR Gr21a + chr2L 781238 5` UTR Gr21a + chr2L_12_780001 chr2L_780001 RAL-307_125b 18 chr2L 892354 892377 chr2L 892520 892543 11 166 13.0 14.0 13.5 0.8 189 chr2L 892354 intergenic not near genes chr2L 892448 intergenic not near genes chr2L 892543 intergenic not near genes chr2L_11_890001 chr2L_890001 RAL-307_125b 19 chr2L 892379 892422 chr2L 892517 892587 18 162 11.0 13.0 12.0 1.4 208 chr2L 892379 intergenic not near genes chr2L 892483 intergenic not near genes chr2L 892587 intergenic not near genes chr2L_18_890001 chr2L_890001 RAL-307_125b 20 chr2L 908764 908840 chr2L 908896 908972 20 126 7.0 0.0 3.5 4.4 208 chr2L 908764 intergenic not near genes chr2L 908868 intergenic not near genes chr2L 908972 intergenic not near genes chr2L_20_905001 chr2L_905001 RAL-307_125b 21 chr2L 922423 922496 chr2L 922554 922601 25 127 8.5 9.5 9.0 2.5 178 chr2L 922423 intergenic CG4341 + chr2L 922512 intergenic CG4341 + chr2L 922601 intergenic CG4341 + chr2L_25_920001 chr2L_920001 RAL-307_125b 22 chr2L 937000 937064 chr2L 937126 937190 15 120 2.5 4.5 3.5 3.3 190 chr2L 937000 intron CG4341 + chr2L 937095 intron CG4341 + chr2L 937190 intron CG4341 + chr2L_15_935001 chr2L_935001 RAL-307_125b 23 chr2L 976831 976911 chr2L 984517 984597 roo 26 7685 11.0 8.5 9.8 2.4 7766 chr2L 976831 intergenic not near genes chr2L 980714 intergenic not near genes chr2L 984597 intergenic not near genes chr2L_26_980001 chr2L_980001 RAL-307_125b 24 chr2L 996672 996720 chr2L 1005817 1005865 roo 11 9145 10.0 6.0 8.0 1.2 9193 chr2L 996672 intergenic not near genes chr2L 1001268 intergenic not near genes chr2L 1005865 intergenic not near genes chr2L_11_1000001 chr2L_1000001 RAL-307_125b 25 chr2L 1026157 1026176 chr2L 1026271 1026277 12 121 20.0 5.5 12.8 0.9 120 chr2L 1026157 intron,3` UTR IA-2 -,CG4375 - chr2L 1026217 intron,3` UTR IA-2 -,CG4375 - chr2L 1026277 intron,exon IA-2 -,CG4375 - chr2L_12_1025001 chr2L_1025001 RAL-307_125b 26 chr2L 1035514 1035589 chr2L 1035641 1035696 32 125 11.5 5.5 8.5 3.4 182 chr2L 1035514 intron IA-2 - chr2L 1035605 intron IA-2 - chr2L 1035696 intron IA-2 - chr2L_32_1035001 chr2L_1035001 RAL-307_125b 27 chr2L 1057445 1057483 chr2L 1057578 1057616 7 133 0.0 5.0 2.5 2.0 171 chr2L 1057445 intron S - chr2L 1057530 intron S - chr2L 1057616 intron S - chr2L_7_1055001 chr2L_1055001 RAL-307_125b 28 chr2L 1083659 1083721 chr2L 1083785 1083847 35 126 9.0 13.0 11.0 2.9 188 chr2L 1083659 3` UTR,3` UTR Atg4a +,CG4629 - chr2L 1083753 3` UTR,3` UTR Atg4a +,CG4629 - chr2L 1083847 3` UTR,3` UTR Atg4a +,CG4629 - chr2L_35_1080001 chr2L_1080001 RAL-307_125b 29 chr2L 1156810 1156887 chr2L 1156965 1157042 30 152 13.0 9.0 11.0 2.5 232 chr2L 1156810 intron capt - chr2L 1156926 intron capt - chr2L 1157042 intron capt - chr2L_30_1155001 chr2L_1155001 RAL-307_125b 30 chr2L 1220092 1220099 chr2L 1227608 1227615 blood 7 7515 21.0 14.0 17.5 0.4 7523 chr2L 1220092 intron CG42329 + chr2L 1223854 intron CG42329 + chr2L 1227615 intron CG42329 + chr2L_7_1220001 chr2L_1220001 RAL-307_125b 31 chr2L 1220108 1220156 chr2L 1227599 1227657 blood 21 7509 10.5 10.0 10.2 1.9 7549 chr2L 1220108 intron CG42329 + chr2L 1223882 intron CG42329 + chr2L 1227657 intron CG42329 + chr2L_21_1220001 chr2L_1220001 RAL-307_125b 32 chr2L 1320254 1320268 chr2L 1320370 1320396 4 125 13.0 10.5 11.8 0.3 142 chr2L 1320254 intergenic not near genes chr2L 1320325 intergenic not near genes chr2L 1320396 intergenic not near genes chr2L_4_1320001 chr2L_1320001 RAL-307_125b 33 chr2L 1320270 1320309 chr2L 1320355 1320389 10 101 5.5 8.0 6.8 1.3 119 chr2L 1320270 intergenic not near genes chr2L 1320330 intergenic not near genes chr2L 1320389 intergenic not near genes chr2L_10_1320001 chr2L_1320001 RAL-307_125b 34 chr2L 1399053 1399103 chr2L 1399206 1399256 19 151 13.5 13.0 13.2 1.3 203 chr2L 1399053 intron lea - chr2L 1399154 intron lea - chr2L 1399256 intron lea - chr2L_19_1395001 chr2L_1395001 RAL-307_125b 35 chr2L 1415052 1415122 chr2L 1415344 1415376 24 289 7.5 5.0 6.2 3.3 324 chr2L 1415052 intron lea - chr2L 1415214 intron lea - chr2L 1415376 intron lea - chr2L_24_1415001 chr2L_1415001 RAL-307_125b 36 chr2L 1508002 1508271 chr2L 1508135 1508402 55 130 6.0 8.0 7.0 6.9 400 chr2L 1508002 intergenic not near genes chr2L 1508202 intergenic not near genes chr2L 1508402 intergenic not near genes chr2L_55_1505001 chr2L_1505001 RAL-307_125b 37 chr2L 1525954 1525981 chr2L 1526056 1526114 10 115 9.5 9.0 9.2 1.0 160 chr2L 1525954 intergenic not near genes chr2L 1526034 intergenic not near genes chr2L 1526114 intergenic not near genes chr2L_10_1525001 chr2L_1525001 RAL-307_125b 38 chr2L 1525982 1525997 chr2L 1526055 1526130 10 121 7.0 8.5 7.8 1.1 148 chr2L 1525982 intergenic not near genes chr2L 1526056 intergenic not near genes chr2L 1526130 intergenic not near genes chr2L_10_1525001 chr2L_1525001 RAL-307_125b 39 chr2L 1529012 1529085 chr2L 1529153 1529226 17 138 4.0 2.5 3.2 4.0 214 chr2L 1529012 intergenic not near genes chr2L 1529119 intergenic not near genes chr2L 1529226 intergenic not near genes chr2L_17_1525001 chr2L_1525001 RAL-307_125b 40 chr2L 1534012 1534087 chr2L 1534392 1534467 40 380 11.0 12.5 11.8 3.1 455 chr2L 1534012 intergenic not near genes chr2L 1534240 intergenic not near genes chr2L 1534467 intergenic not near genes chr2L_40_1530001 chr2L_1530001 RAL-307_125b 41 chr2L 1536443 1536519 chr2L 1536625 1536675 19 174 0.0 0.5 0.2 15.8 232 chr2L 1536443 intergenic not near genes chr2L 1536559 intergenic not near genes chr2L 1536675 intergenic not near genes chr2L_19_1535001 chr2L_1535001 RAL-307_125b 42 chr2L 1552620 1552697 chr2L 1552891 1552962 16 270 7.5 0.0 3.8 3.3 342 chr2L 1552620 intergenic not near genes chr2L 1552791 intergenic not near genes chr2L 1552962 intergenic not near genes chr2L_16_1550001 chr2L_1550001 RAL-307_125b 43 chr2L 1570650 1570704 chr2L 1573572 1573626 F-element 19 2922 12.0 6.5 9.2 1.9 2976 chr2L 1570650 intron haf + chr2L 1572138 intron haf + chr2L 1573626 intron haf + chr2L_19_1570001 chr2L_1570001 RAL-307_125b 44 chr2L 1634713 1634764 chr2L 1634854 1634906 19 138 7.5 15.0 11.2 1.6 193 chr2L 1634713 intergenic not near genes chr2L 1634810 intergenic not near genes chr2L 1634906 intergenic not near genes chr2L_19_1630001 chr2L_1630001 RAL-307_125b 45 chr2L 1643325 1643378 chr2L 1643477 1643540 6 154 0.0 2.5 1.2 2.7 215 chr2L 1643325 intergenic not near genes chr2L 1643432 intergenic not near genes chr2L 1643540 intergenic not near genes chr2L_6_1640001 chr2L_1640001 RAL-307_125b 46 chr2L 1678939 1678996 chr2L 1686454 1686478 blood 29 7513 12.5 12.0 12.2 2.2 7539 chr2L 1678939 intron chinmo + chr2L 1682708 intron chinmo + chr2L 1686478 intron chinmo + chr2L_29_1680001 chr2L_1680001 RAL-307_125b 47 chr2L 1686986 1687053 chr2L 1687114 1687170 21 120 5.5 6.0 5.8 3.1 184 chr2L 1686986 intron chinmo + chr2L 1687078 intron chinmo + chr2L 1687170 intron chinmo + chr2L_21_1685001 chr2L_1685001 RAL-307_125b 48 chr2L 1711311 1711386 chr2L 1711685 1711685 mdg3 19 365 7.5 9.0 8.2 2.1 374 chr2L 1711311 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711498 3` UTR frtz - chr2L 1711685 3` UTR frtz - chr2L_19_1710001 chr2L_1710001 RAL-307_125b 49 chr2L 1716039 1716114 chr2L 1716173 1716248 19 131 2.0 9.5 5.8 2.8 209 chr2L 1716039 intergenic frtz -,Rim2 - chr2L 1716144 intergenic Rim2 -,frtz - chr2L 1716248 3` UTR Rim2 - chr2L_19_1715001 chr2L_1715001 RAL-307_125b 50 chr2L 1721813 1721853 chr2L 1721912 1721973 26 125 0.0 7.0 3.5 5.8 160 chr2L 1721813 intron Rim2 - chr2L 1721893 intron Rim2 - chr2L 1721973 intron Rim2 - chr2L_26_1720001 chr2L_1720001 RAL-307_125b 51 chr2L 1744410 1744471 chr2L 1744544 1744606 10 135 0.0 17.0 8.5 1.1 196 chr2L 1744410 intron CG17646 + chr2L 1744508 intron CG17646 + chr2L 1744606 intron CG17646 + chr2L_10_1740001 chr2L_1740001 RAL-307_125b 52 chr2L 1814362 1814376 chr2L 1814492 1814512 4 133 16.5 18.5 17.5 0.2 150 chr2L 1814362 intergenic not near genes chr2L 1814437 intergenic not near genes chr2L 1814512 intergenic not near genes chr2L_4_1810001 chr2L_1810001 RAL-307_125b 53 chr2L 1828365 1828431 chr2L 1828499 1828565 18 133 5.5 7.0 6.2 2.5 200 chr2L 1828365 intergenic not near genes chr2L 1828465 intergenic not near genes chr2L 1828565 intergenic not near genes chr2L_18_1825001 chr2L_1825001 RAL-307_125b 54 chr2L 1883306 1883320 chr2L 1883432 1883446 8 126 6.5 0.0 3.2 1.9 140 chr2L 1883306 intron CG15358 - chr2L 1883376 intron CG15358 - chr2L 1883446 intron CG15358 - chr2L_8_1880001 chr2L_1880001 RAL-307_125b 55 chr2L 1883367 1883447 chr2L 1883999 1884067 24 625 0.0 2.5 1.2 10.9 700 chr2L 1883367 intron CG15358 - chr2L 1883717 intron CG15358 - chr2L 1884067 intergenic CG15358 - chr2L_24_1880001 chr2L_1880001 RAL-307_125b 56 chr2L 1905931 1906008 chr2L 1906071 1906079 39 138 11.0 8.5 9.8 3.6 148 chr2L 1905931 intron CG7337 + chr2L 1906005 intron CG7337 + chr2L 1906079 intron CG7337 + chr2L_39_1905001 chr2L_1905001 RAL-307_125b 57 chr2L 1933614 1933685 chr2L 1933744 1933816 18 130 9.0 5.0 7.0 2.2 202 chr2L 1933614 intron CG7337 + chr2L 1933715 intron CG7337 + chr2L 1933816 exon CG7337 + chr2L_18_1930001 chr2L_1930001 RAL-307_125b 58 chr2L 1973295 1973336 chr2L 1973496 1973537 19 200 11.0 13.5 12.2 1.4 242 chr2L 1973295 intergenic not near genes chr2L 1973416 intergenic not near genes chr2L 1973537 intergenic Der-1 + chr2L_19_1970001 chr2L_1970001 RAL-307_125b 59 chr2L 1973337 1973358 chr2L 1973488 1973559 13 194 8.5 11.5 10.0 1.2 222 chr2L 1973337 intergenic not near genes chr2L 1973448 intergenic not near genes chr2L 1973559 intergenic Der-1 + chr2L_13_1970001 chr2L_1970001 RAL-307_125b 60 chr2L 1993153 1993210 chr2L 1993288 1993346 17 135 6.5 11.0 8.8 1.7 193 chr2L 1993153 intergenic not near genes chr2L 1993250 intergenic not near genes chr2L 1993346 intergenic not near genes chr2L_17_1990001 chr2L_1990001 RAL-307_125b 61 chr2L 1993211 1993225 chr2L 1993285 1993361 9 122 3.5 10.0 6.8 1.2 150 chr2L 1993211 intergenic not near genes chr2L 1993286 intergenic not near genes chr2L 1993361 intergenic not near genes chr2L_9_1990001 chr2L_1990001 RAL-307_125b 62 chr2L 2007834 2007856 chr2L 2007977 2008014 11 157 11.0 14.0 12.5 0.8 180 chr2L 2007834 intergenic CR45712 + chr2L 2007924 intergenic CR45712 +,Nplp4 + chr2L 2008014 intergenic CR45712 +,Nplp4 + chr2L_11_2005001 chr2L_2005001 RAL-307_125b 63 chr2L 2007857 2007872 chr2L 2007975 2008030 9 154 6.0 13.5 9.8 0.8 173 chr2L 2007857 intergenic CR45712 + chr2L 2007944 intergenic CR45712 +,Nplp4 + chr2L 2008030 intergenic CR45712 +,Nplp4 + chr2L_9_2005001 chr2L_2005001 RAL-307_125b 64 chr2L 2016080 2016159 chr2L 2016210 2016289 27 126 8.0 10.5 9.2 2.6 209 chr2L 2016080 intron CG4238 + chr2L 2016184 intron CG4238 + chr2L 2016289 intron CG4238 + chr2L_27_2015001 chr2L_2015001 RAL-307_125b 65 chr2L 2047768 2047774 chr2L 2048013 2048019 7 245 25.5 0.5 13.0 0.5 251 chr2L 2047768 3` UTR Kebab + chr2L 2047894 3` UTR Kebab + chr2L 2048019 3` UTR Kebab + chr2L_7_2045001 chr2L_2045001 RAL-307_125b 66 chr2L 2047788 2047828 chr2L 2048002 2048067 13 234 11.0 0.5 5.8 1.9 279 chr2L 2047788 3` UTR Kebab + chr2L 2047928 3` UTR Kebab + chr2L 2048067 intergenic Kebab + chr2L_13_2045001 chr2L_2045001 RAL-307_125b 67 chr2L 2070503 2070525 chr2L 2070667 2070696 4 169 7.5 9.0 8.2 0.4 193 chr2L 2070503 intron dpr3 - chr2L 2070600 intron dpr3 - chr2L 2070696 intron dpr3 - chr2L_4_2070001 chr2L_2070001 RAL-307_125b 68 chr2L 2070528 2070567 chr2L 2070659 2070738 14 154 2.5 7.0 4.8 2.4 210 chr2L 2070528 intron dpr3 - chr2L 2070633 intron dpr3 - chr2L 2070738 intron dpr3 - chr2L_14_2070001 chr2L_2070001 RAL-307_125b 69 chr2L 2097660 2097741 chr2L 2097880 2097961 18 213 1.0 7.0 4.0 3.6 301 chr2L 2097660 intron dpr3 - chr2L 2097810 intron dpr3 - chr2L 2097961 intron dpr3 - chr2L_18_2095001 chr2L_2095001 RAL-307_125b 70 chr2L 2100397 2100406 chr2L 2109545 2109554 roo 5 9158 10.5 12.0 11.2 0.4 9157 chr2L 2100397 intron dpr3 - chr2L 2104976 intron dpr3 - chr2L 2109554 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-307_125b 71 chr2L 2112118 2112134 chr2L 2119775 2119837 opus 9 7692 1.0 5.0 3.0 2.2 7719 chr2L 2112118 intergenic not near genes chr2L 2115978 intergenic not near genes chr2L 2119837 intergenic not near genes chr2L_9_2115001 chr2L_2115001 RAL-307_125b 72 chr2L 2134147 2134172 chr2L 2134325 2134344 9 177 15.0 1.0 8.0 1.0 197 chr2L 2134147 intron GlyP + chr2L 2134246 intron GlyP + chr2L 2134344 intron GlyP + chr2L_9_2130001 chr2L_2130001 RAL-307_125b 73 chr2L 2134185 2134225 chr2L 2134324 2134398 16 166 8.0 1.0 4.5 2.9 213 chr2L 2134185 intron GlyP + chr2L 2134292 intron GlyP + chr2L 2134398 intron GlyP + chr2L_16_2130001 chr2L_2130001 RAL-307_125b 74 chr2L 2165564 2165634 chr2L 2166206 2166276 35 639 7.5 14.5 11.0 2.9 712 chr2L 2165564 intron aop - chr2L 2165920 intron aop - chr2L 2166276 intron aop - chr2L_35_2165001 chr2L_2165001 RAL-307_125b 75 chr2L 2250368 2250418 chr2L 2251185 2251210 13 813 15.0 0.0 7.5 1.5 842 chr2L 2250368 intergenic Ser12 - chr2L 2250789 exon Ser12 - chr2L 2251210 exon Ser12 - chr2L_13_2250001 chr2L_2250001 RAL-307_125b 76 chr2L 2256421 2256477 chr2L 2256551 2256607 18 129 3.0 8.0 5.5 2.8 186 chr2L 2256421 intergenic not near genes chr2L 2256514 intergenic not near genes chr2L 2256607 intergenic not near genes chr2L_18_2255001 chr2L_2255001 RAL-307_125b 77 chr2L 2260768 2260810 chr2L 2260904 2260946 8 136 6.5 5.0 5.8 1.2 178 chr2L 2260768 intergenic not near genes chr2L 2260857 intergenic not near genes chr2L 2260946 intergenic not near genes chr2L_8_2260001 chr2L_2260001 RAL-307_125b 78 chr2L 2262266 2262334 chr2L 2262388 2262461 18 123 7.0 10.0 8.5 1.9 195 chr2L 2262266 intergenic not near genes chr2L 2262364 intergenic not near genes chr2L 2262461 intergenic not near genes chr2L_18_2260001 chr2L_2260001 RAL-307_125b 79 chr2L 2294015 2294066 chr2L 2299246 2299288 copia 13 5237 7.5 6.5 7.0 1.6 5273 chr2L 2294015 intergenic not near genes chr2L 2296652 intergenic not near genes chr2L 2299288 intergenic not near genes chr2L_13_2295001 chr2L_2295001 RAL-307_125b 80 chr2L 2305090 2305133 chr2L 2305214 2305237 19 139 12.0 10.5 11.2 1.6 147 chr2L 2305090 intergenic not near genes chr2L 2305164 intergenic not near genes chr2L 2305237 intergenic not near genes chr2L_19_2305001 chr2L_2305001 RAL-307_125b 81 chr2L 2317071 2317129 chr2L 2317292 2317350 20 220 60.5 63.5 62.0 0.3 279 chr2L 2317071 intron,intron CG9967 -,eys + chr2L 2317210 intron,intron CG9967 -,eys + chr2L 2317350 intron,intron CG9967 -,eys + chr2L_20_2315001 chr2L_2315001 RAL-307_125b 82 chr2L 2372315 2372369 chr2L 2372451 2372505 29 135 10.5 7.5 9.0 2.9 190 chr2L 2372315 intergenic CG3609 - chr2L 2372410 intergenic CG3609 - chr2L 2372505 3` UTR CG3609 - chr2L_29_2370001 chr2L_2370001 RAL-307_125b 83 chr2L 2373782 2373851 chr2L 2374352 2374421 30 568 6.0 11.0 8.5 3.2 639 chr2L 2373782 intron CG3609 - chr2L 2374102 intron CG3609 - chr2L 2374421 intron CG3609 - chr2L_30_2370001 chr2L_2370001 RAL-307_125b 84 chr2L 2396038 2396095 chr2L 2396165 2396247 26 142 8.0 6.0 7.0 3.2 209 chr2L 2396038 intron VGlut + chr2L 2396142 intron VGlut + chr2L 2396247 intron VGlut + chr2L_26_2395001 chr2L_2395001 RAL-307_125b 85 chr2L 2450528 2450604 chr2L 2450655 2450731 36 126 8.5 11.5 10.0 3.3 203 chr2L 2450528 intron dpp + chr2L 2450630 intron dpp + chr2L 2450731 intron dpp + chr2L_36_2450001 chr2L_2450001 RAL-307_125b 86 chr2L 2500339 2500406 chr2L 2500509 2500571 18 159 5.0 8.0 6.5 2.4 232 chr2L 2500339 intergenic not near genes chr2L 2500455 intergenic not near genes chr2L 2500571 intergenic not near genes chr2L_18_2500001 chr2L_2500001 RAL-307_125b 87 chr2L 2511675 2511761 chr2L 2511816 2511855 20 138 11.0 2.5 6.8 2.6 180 chr2L 2511675 intergenic not near genes chr2L 2511765 intergenic not near genes chr2L 2511855 intergenic not near genes chr2L_20_2510001 chr2L_2510001 RAL-307_125b 88 chr2L 2517228 2517300 chr2L 2517521 2517593 22 283 7.0 7.0 7.0 2.8 365 chr2L 2517228 exon CG3528 - chr2L 2517410 exon CG3528 - chr2L 2517593 exon CG3528 - chr2L_22_2515001 chr2L_2515001 RAL-307_125b 89 chr2L 2547966 2548004 chr2L 2549124 2549190 24 1161 10.5 56.5 33.5 0.7 1224 chr2L 2547966 intergenic not near genes chr2L 2548578 intergenic not near genes chr2L 2549190 intergenic not near genes chr2L_24_2545001 chr2L_2545001 RAL-307_125b 90 chr2L 2557199 2557217 chr2L 2557325 2557343 10 126 11.0 23.5 17.2 0.5 144 chr2L 2557199 intergenic not near genes chr2L 2557271 intergenic not near genes chr2L 2557343 intergenic not near genes chr2L_10_2555001 chr2L_2555001 RAL-307_125b 91 chr2L 2565504 2565560 chr2L 2571627 2571683 297 28 6120 7.5 9.0 8.2 3.0 6179 chr2L 2565504 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571683 exon Cyp309a2 - chr2L_28_2565001 chr2L_2565001 RAL-307_125b 92 chr2L 2613360 2613378 chr2L 2613471 2613479 7 121 11.0 9.5 10.2 0.6 119 chr2L 2613360 intergenic not near genes chr2L 2613420 intergenic not near genes chr2L 2613479 intergenic not near genes chr2L_7_2610001 chr2L_2610001 RAL-307_125b 93 chr2L 2613380 2613397 chr2L 2613459 2613499 5 88 8.0 8.0 8.0 0.6 119 chr2L 2613380 intergenic not near genes chr2L 2613440 intergenic not near genes chr2L 2613499 intergenic not near genes chr2L_5_2610001 chr2L_2610001 RAL-307_125b 94 chr2L 2661174 2661229 chr2L 2663045 2663086 I-element 16 1871 6.5 7.0 6.8 2.1 1912 chr2L 2661174 intergenic not near genes chr2L 2662130 intergenic not near genes chr2L 2663086 intergenic not near genes chr2L_16_2660001 chr2L_2660001 RAL-307_125b 95 chr2L 2698806 2698894 chr2L 2698954 2699031 19 129 0.5 8.5 4.5 3.5 225 chr2L 2698806 intron CG31690 + chr2L 2698918 intron CG31690 + chr2L 2699031 intron CG31690 + chr2L_19_2695001 chr2L_2695001 RAL-307_125b 96 chr2L 2703395 2703438 chr2L 2703529 2703571 16 132 10.0 14.0 12.0 1.2 176 chr2L 2703395 intron CG31690 + chr2L 2703483 intron CG31690 + chr2L 2703571 intron CG31690 + chr2L_16_2700001 chr2L_2700001 RAL-307_125b 97 chr2L 2715638 2715699 chr2L 2715764 2715825 31 125 10.5 8.0 9.2 3.0 187 chr2L 2715638 intron CG31690 + chr2L 2715732 intron CG31690 + chr2L 2715825 intron CG31690 + chr2L_31_2715001 chr2L_2715001 RAL-307_125b 98 chr2L 2724362 2724436 chr2L 2724488 2724519 27 123 6.0 11.0 8.5 2.8 157 chr2L 2724362 intergenic not near genes chr2L 2724440 intergenic not near genes chr2L 2724519 intergenic not near genes chr2L_27_2720001 chr2L_2720001 RAL-307_125b 99 chr2L 2772577 2772622 chr2L 2779206 2779218 297 26 6629 7.5 13.0 10.2 2.3 6641 chr2L 2772577 3` UTR Syt1 - chr2L 2775898 intron Syt1 - chr2L 2779218 3` UTR Syt1 - chr2L_26_2775001 chr2L_2775001 RAL-307_125b 100 chr2L 2786064 2786107 chr2L 2786201 2786244 22 136 11.5 10.5 11.0 1.8 180 chr2L 2786064 intron Syt1 - chr2L 2786154 intron Syt1 - chr2L 2786244 intron Syt1 - chr2L_22_2785001 chr2L_2785001 RAL-307_125b 101 chr2L 2786109 2786134 chr2L 2786189 2786256 21 132 7.0 9.5 8.2 2.3 147 chr2L 2786109 intron Syt1 - chr2L 2786182 intron Syt1 - chr2L 2786256 intron Syt1 - chr2L_21_2785001 chr2L_2785001 RAL-307_125b 102 chr2L 2826488 2826574 chr2L 2826630 2826707 30 137 1.0 4.5 2.8 7.9 219 chr2L 2826488 intron Duox - chr2L 2826598 intron Duox - chr2L 2826707 intron Duox - chr2L_30_2825001 chr2L_2825001 RAL-307_125b 103 chr2L 2830376 2830423 chr2L 2830556 2830603 11 180 4.0 2.0 3.0 2.8 227 chr2L 2830376 intergenic Duox - chr2L 2830490 intergenic Duox - chr2L 2830603 intergenic Duox - chr2L_11_2830001 chr2L_2830001 RAL-307_125b 104 chr2L 2857782 2857833 chr2L 2857908 2857959 11 126 5.5 1.5 3.5 2.4 177 chr2L 2857782 intron CG2991 + chr2L 2857870 intron CG2991 + chr2L 2857959 intron CG2991 + chr2L_11_2855001 chr2L_2855001 RAL-307_125b 105 chr2L 2873436 2873467 chr2L 2873558 2873595 9 127 0.0 14.0 7.0 1.1 159 chr2L 2873436 intron CG31694 - chr2L 2873516 intron CG31694 - chr2L 2873595 intron CG31694 - chr2L_9_2870001 chr2L_2870001 RAL-307_125b 106 chr2L 2885323 2885393 chr2L 2885450 2885520 33 126 6.0 9.5 7.8 3.7 197 chr2L 2885323 intron NTPase - chr2L 2885422 intron NTPase - chr2L 2885520 intron NTPase - chr2L_33_2885001 chr2L_2885001 RAL-307_125b 107 chr2L 2891566 2891633 chr2L 2891746 2891814 36 177 7.5 12.5 10.0 3.3 248 chr2L 2891566 intron lilli + chr2L 2891690 intron lilli + chr2L 2891814 intron lilli + chr2L_36_2890001 chr2L_2890001 RAL-307_125b 108 chr2L 2937374 2937406 chr2L 2937501 2937533 21 125 22.0 8.5 15.2 1.3 159 chr2L 2937374 intron lilli + chr2L 2937454 intron lilli + chr2L 2937533 intron lilli + chr2L_21_2935001 chr2L_2935001 RAL-307_125b 109 chr2L 2937407 2937444 chr2L 2937498 2937571 18 124 13.0 8.0 10.5 1.6 164 chr2L 2937407 intron lilli + chr2L 2937489 intron lilli + chr2L 2937571 intron lilli + chr2L_18_2935001 chr2L_2935001 RAL-307_125b 110 chr2L 3072988 3073055 chr2L 3078241 3078303 copia 33 5252 7.5 5.0 6.2 4.6 5315 chr2L 3072988 intron toc - chr2L 3075646 intron toc - chr2L 3078303 intron toc - chr2L_33_3075001 chr2L_3075001 RAL-307_125b 111 chr2L 3108822 3108898 chr2L 3108949 3109025 30 126 4.5 11.5 8.0 3.3 203 chr2L 3108822 exon toc - chr2L 3108924 intron toc - chr2L 3109025 intron toc - chr2L_30_3105001 chr2L_3105001 RAL-307_125b 112 chr2L 3117350 3117416 chr2L 3117693 3117754 29 339 7.0 3.0 5.0 4.8 404 chr2L 3117350 intron toc - chr2L 3117552 intron toc - chr2L 3117754 intron toc - chr2L_29_3115001 chr2L_3115001 RAL-307_125b 113 chr2L 3121935 3121998 chr2L 3122071 3122134 29 136 8.5 8.0 8.2 3.2 199 chr2L 3121935 intron toc - chr2L 3122034 intron toc - chr2L 3122134 intron toc - chr2L_29_3120001 chr2L_3120001 RAL-307_125b 114 chr2L 3141353 3141414 chr2L 3141961 3142017 23 605 10.5 6.0 8.2 2.5 664 chr2L 3141353 intron toc - chr2L 3141685 intron toc - chr2L 3142017 intron toc - chr2L_23_3140001 chr2L_3140001 RAL-307_125b 115 chr2L 3141415 3141423 chr2L 3141956 3142015 4 586 9.0 4.5 6.8 0.5 600 chr2L 3141415 intron toc - chr2L 3141715 intron toc - chr2L 3142015 intron toc - chr2L_4_3140001 chr2L_3140001 RAL-307_125b 116 chr2L 3159663 3159700 chr2L 3159789 3159826 10 126 12.0 8.5 10.2 0.9 163 chr2L 3159663 intergenic Mad -,gkt + chr2L 3159744 intergenic Mad -,gkt + chr2L 3159826 intergenic gkt +,Mad - chr2L_10_3155001 chr2L_3155001 RAL-307_125b 117 chr2L 3185048 3185078 chr2L 3185174 3185188 9 120 4.0 0.0 2.0 3.0 140 chr2L 3185048 exon CG34393 - chr2L 3185118 intron CG34393 - chr2L 3185188 intron CG34393 - chr2L_9_3185001 chr2L_3185001 RAL-307_125b 118 chr2L 3186427 3186477 chr2L 3186563 3186612 26 136 15.0 8.0 11.5 2.1 185 chr2L 3186427 intron CG34393 - chr2L 3186520 intron CG34393 - chr2L 3186612 intron CG34393 - chr2L_26_3185001 chr2L_3185001 RAL-307_125b 119 chr2L 3186480 3186500 chr2L 3186562 3186636 7 128 7.0 7.5 7.2 0.9 156 chr2L 3186480 intron CG34393 - chr2L 3186558 intron CG34393 - chr2L 3186636 intron CG34393 - chr2L_7_3185001 chr2L_3185001 RAL-307_125b 120 chr2L 3192164 3192178 chr2L 3192325 3192338 7 160 23.5 14.0 18.8 0.4 174 chr2L 3192164 exon CG34393 - chr2L 3192251 intron CG34393 - chr2L 3192338 intron CG34393 - chr2L_7_3190001 chr2L_3190001 RAL-307_125b 121 chr2L 3192180 3192233 chr2L 3192320 3192379 33 155 7.0 13.0 10.0 3.0 199 chr2L 3192180 exon CG34393 - chr2L 3192280 intron CG34393 - chr2L 3192379 intron CG34393 - chr2L_33_3190001 chr2L_3190001 RAL-307_125b 122 chr2L 3202693 3202762 chr2L 3210172 3210241 mdg1 15 7479 12.0 0.0 6.0 2.1 7548 chr2L 3202693 intergenic not near genes chr2L 3206467 intergenic not near genes chr2L 3210241 intergenic CR45336 + chr2L_15_3205001 chr2L_3205001 RAL-307_125b 123 chr2L 3251465 3251522 chr2L 3259080 3259107 springer 18 7611 3.0 17.0 10.0 1.6 7642 chr2L 3251465 intergenic not near genes chr2L 3255286 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_18_3255001 chr2L_3255001 RAL-307_125b 124 chr2L 3261462 3261509 chr2L 3261604 3261625 26 140 7.0 16.5 11.8 2.0 163 chr2L 3261462 intergenic CR45338 -,CR45337 - chr2L 3261544 intergenic CR45338 -,CR45337 - chr2L 3261625 intergenic CR45338 -,CR45337 - chr2L_26_3260001 chr2L_3260001 RAL-307_125b 125 chr2L 3272920 3272967 chr2L 3273046 3273101 19 134 0.5 3.0 1.8 6.8 181 chr2L 3272920 intergenic not near genes chr2L 3273010 intergenic not near genes chr2L 3273101 intergenic not near genes chr2L_19_3270001 chr2L_3270001 RAL-307_125b 126 chr2L 3291205 3291218 chr2L 3291335 3291348 5 130 15.5 13.0 14.2 0.3 143 chr2L 3291205 intergenic CG9664 - chr2L 3291276 3` UTR CG9664 - chr2L 3291348 3` UTR CG9664 - chr2L_5_3290001 chr2L_3290001 RAL-307_125b 127 chr2L 3291220 3291269 chr2L 3291325 3291368 17 116 7.5 10.5 9.0 1.7 148 chr2L 3291220 intergenic CG9664 - chr2L 3291294 3` UTR CG9664 - chr2L 3291368 3` UTR CG9664 - chr2L_17_3290001 chr2L_3290001 RAL-307_125b 128 chr2L 3388551 3388629 chr2L 3388841 3388890 pogo 30 288 7.5 10.0 8.8 3.1 339 chr2L 3388551 intergenic CG42460 - chr2L 3388720 intergenic CG42460 - chr2L 3388890 intergenic CG42460 -,CR44791 + chr2L_30_3385001 chr2L_3385001 RAL-307_125b 129 chr2L 3401818 3401890 chr2L 3401959 3402031 28 139 13.0 12.5 12.8 2.0 213 chr2L 3401818 intergenic not near genes chr2L 3401924 intergenic not near genes chr2L 3402031 intergenic not near genes chr2L_28_3400001 chr2L_3400001 RAL-307_125b 130 chr2L 3432420 3432448 chr2L 3432537 3432553 11 119 0.0 6.5 3.2 2.6 133 chr2L 3432420 intergenic not near genes chr2L 3432486 intergenic not near genes chr2L 3432553 intergenic not near genes chr2L_11_3430001 chr2L_3430001 RAL-307_125b 131 chr2L 3477457 3477464 chr2L 3477584 3477591 8 127 0.0 10.0 5.0 1.3 134 chr2L 3477457 5` UTR CR43928 + chr2L 3477524 5` UTR CR43928 + chr2L 3477591 5` UTR CR43928 + chr2L_8_3475001 chr2L_3475001 RAL-307_125b 132 chr2L 3482101 3482175 chr2L 3482241 3482315 36 137 7.0 5.0 6.0 5.1 214 chr2L 3482101 intron CG15414 - chr2L 3482208 intron CG15414 - chr2L 3482315 intron CG15414 - chr2L_36_3480001 chr2L_3480001 RAL-307_125b 133 chr2L 3536764 3536780 chr2L 3536892 3536908 5 126 11.5 6.5 9.0 0.5 144 chr2L 3536764 intergenic not near genes chr2L 3536836 intergenic not near genes chr2L 3536908 intergenic not near genes chr2L_5_3535001 chr2L_3535001 RAL-307_125b 134 chr2L 3536781 3536836 chr2L 3536886 3536943 22 116 4.0 5.5 4.8 3.8 162 chr2L 3536781 intergenic not near genes chr2L 3536862 intergenic not near genes chr2L 3536943 intergenic not near genes chr2L_22_3535001 chr2L_3535001 RAL-307_125b 135 chr2L 3548538 3548609 chr2L 3548666 3548738 34 127 9.0 10.5 9.8 3.1 200 chr2L 3548538 intergenic drm + chr2L 3548638 intergenic drm + chr2L 3548738 intergenic drm + chr2L_34_3545001 chr2L_3545001 RAL-307_125b 136 chr2L 3584620 3584702 chr2L 3584746 3584809 14 124 10.5 7.5 9.0 1.4 189 chr2L 3584620 intergenic not near genes chr2L 3584714 intergenic not near genes chr2L 3584809 intergenic not near genes chr2L_14_3580001 chr2L_3580001 RAL-307_125b 137 chr2L 3591855 3591867 chr2L 3591917 3591938 6 82 8.0 11.0 9.5 0.6 83 chr2L 3591855 intergenic not near genes chr2L 3591896 intergenic not near genes chr2L 3591938 intergenic not near genes chr2L_6_3590001 chr2L_3590001 RAL-307_125b 138 chr2L 3632263 3632277 chr2L 3632350 3632384 4 110 0.5 0.5 0.5 2.7 121 chr2L 3632263 intron for - chr2L 3632324 intron for - chr2L 3632384 intron for - chr2L_4_3630001 chr2L_3630001 RAL-307_125b 139 chr2L 3634067 3634125 chr2L 3634194 3634257 29 129 13.5 13.5 13.5 2.0 190 chr2L 3634067 intron for - chr2L 3634162 intron for - chr2L 3634257 exon for - chr2L_29_3630001 chr2L_3630001 RAL-307_125b 140 chr2L 3649744 3649812 chr2L 3654997 3655065 copia 29 5251 13.0 11.5 12.2 2.2 5321 chr2L 3649744 intron for - chr2L 3652404 intron for - chr2L 3655065 intron for - chr2L_29_3650001 chr2L_3650001 RAL-307_125b 141 chr2L 3667927 3668060 chr2L 3668052 3668186 18 131 0.5 0.0 0.2 15.0 259 chr2L 3667927 intron CG34340 + chr2L 3668056 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668186 intron,exon CG34340 +,Sfp24Ba - chr2L_18_3665001 chr2L_3665001 RAL-307_125b 142 chr2L 3705328 3705406 chr2L 3705458 3705497 43 127 7.0 9.0 8.0 4.8 169 chr2L 3705328 5` UTR CG31778 - chr2L 3705412 5` UTR CG31778 - chr2L 3705497 intergenic CG31778 - chr2L_43_3705001 chr2L_3705001 RAL-307_125b 143 chr2L 3784755 3784828 chr2L 3785664 3785737 18 909 51.5 34.0 42.8 0.4 982 chr2L 3784755 intergenic CG31960 + chr2L 3785246 exon CG31960 + chr2L 3785737 5` UTR CG31958 + chr2L_18_3785001 chr2L_3785001 RAL-307_125b 144 chr2L 3784706 3784745 chr2L 3785593 3785631 16 887 45.5 40.5 43.0 0.4 925 chr2L 3784706 intergenic CG31960 + chr2L 3785168 exon CG31960 + chr2L 3785631 intergenic CG31960 +,CG31958 + chr2L_16_3785001 chr2L_3785001 RAL-307_125b 145 chr2L 3784704 3784751 chr2L 3785633 3785637 4 900 46.0 36.0 41.0 0.1 933 chr2L 3784704 intergenic CG31960 + chr2L 3785170 exon CG31960 + chr2L 3785637 intergenic CG31960 +,CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-307_125b 146 chr2L 3787604 3787676 chr2L 3787768 3787840 37 163 9.0 8.0 8.5 3.9 236 chr2L 3787604 intron CG3921 + chr2L 3787722 intron CG3921 + chr2L 3787840 intron CG3921 + chr2L_37_3785001 chr2L_3785001 RAL-307_125b 147 chr2L 3788360 3788398 chr2L 3788505 3788525 21 141 13.5 6.5 10.0 1.9 165 chr2L 3788360 intron CG3921 + chr2L 3788442 intron CG3921 + chr2L 3788525 intron CG3921 + chr2L_21_3785001 chr2L_3785001 RAL-307_125b 148 chr2L 3815119 3815199 chr2L 3815247 3815337 31 134 7.0 1.0 4.0 6.2 218 chr2L 3815119 intergenic CR44076 + chr2L 3815228 intergenic CR44076 + chr2L 3815337 intergenic CR44076 + chr2L_31_3815001 chr2L_3815001 RAL-307_125b 149 chr2L 3831798 3831863 chr2L 3831929 3831994 38 130 14.5 9.0 11.8 3.0 196 chr2L 3831798 intergenic not near genes chr2L 3831896 intergenic not near genes chr2L 3831994 intergenic not near genes chr2L_38_3830001 chr2L_3830001 RAL-307_125b 150 chr2L 3898220 3898306 chr2L 3898356 3898418 11 132 1.0 8.5 4.8 1.9 198 chr2L 3898220 intron capu - chr2L 3898319 intron capu - chr2L 3898418 intron capu - chr2L_11_3895001 chr2L_3895001 RAL-307_125b 151 chr2L 3936617 3936646 chr2L 3936736 3936776 18 128 8.5 13.0 10.8 1.5 159 chr2L 3936617 intron fred - chr2L 3936696 intron fred - chr2L 3936776 intron fred - chr2L_18_3935001 chr2L_3935001 RAL-307_125b 152 chr2L 3974693 3974757 chr2L 3974845 3974893 24 162 4.5 8.5 6.5 3.2 200 chr2L 3974693 intron fred - chr2L 3974793 intron fred - chr2L 3974893 intron fred - chr2L_24_3970001 chr2L_3970001 RAL-307_125b 153 chr2L 4026281 4026306 chr2L 4026420 4026455 4 154 4.5 3.0 3.8 0.8 174 chr2L 4026281 intergenic not near genes chr2L 4026368 intergenic not near genes chr2L 4026455 intergenic not near genes chr2L_4_4025001 chr2L_4025001 RAL-307_125b 154 chr2L 4037750 4037807 chr2L 4037887 4037944 31 137 9.0 4.5 6.8 4.0 194 chr2L 4037750 intron ed + chr2L 4037847 intron ed + chr2L 4037944 intron ed + chr2L_31_4035001 chr2L_4035001 RAL-307_125b 155 chr2L 4038939 4038943 chr2L 4039070 4039074 4 130 20.0 11.5 15.8 0.2 135 chr2L 4038939 intron ed + chr2L 4039006 intron ed + chr2L 4039074 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-307_125b 156 chr2L 4048016 4048058 chr2L 4048263 4048327 14 267 6.0 5.5 5.8 2.1 311 chr2L 4048016 intron ed + chr2L 4048172 intron ed + chr2L 4048327 intron ed + chr2L_14_4045001 chr2L_4045001 RAL-307_125b 157 chr2L 4066004 4066022 chr2L 4068879 4068897 Juan 9 2875 17.0 15.0 16.0 0.5 2893 chr2L 4066004 intron ed + chr2L 4067450 intron ed + chr2L 4068897 intron ed + chr2L_9_4065001 chr2L_4065001 RAL-307_125b 158 chr2L 4066026 4066050 chr2L 4068872 4068925 Juan 15 2865 10.0 12.0 11.0 1.2 2899 chr2L 4066026 intron ed + chr2L 4067476 intron ed + chr2L 4068925 intron ed + chr2L_15_4065001 chr2L_4065001 RAL-307_125b 159 chr2L 4147924 4147963 chr2L 4148050 4148089 26 126 7.5 13.0 10.2 2.3 165 chr2L 4147924 intergenic not near genes chr2L 4148006 intergenic not near genes chr2L 4148089 intergenic not near genes chr2L_26_4145001 chr2L_4145001 RAL-307_125b 160 chr2L 4150572 4150655 chr2L 4150702 4150785 24 125 6.0 10.5 8.2 2.6 213 chr2L 4150572 exon CG2955 + chr2L 4150678 exon CG2955 + chr2L 4150785 exon CG2955 + chr2L_24_4150001 chr2L_4150001 RAL-307_125b 161 chr2L 4180081 4180114 chr2L 4180207 4180240 9 126 7.0 9.5 8.2 1.0 159 chr2L 4180081 intergenic not near genes chr2L 4180160 intergenic not near genes chr2L 4180240 intergenic not near genes chr2L_9_4180001 chr2L_4180001 RAL-307_125b 162 chr2L 4181292 4181297 chr2L 4183974 4183979 Burdock 4 2682 8.0 21.5 14.8 0.3 2687 chr2L 4181292 intergenic not near genes chr2L 4182636 intergenic not near genes chr2L 4183979 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-307_125b 163 chr2L 4184424 4184504 chr2L 4184793 4184873 21 368 6.5 6.0 6.2 2.9 449 chr2L 4184424 intergenic not near genes chr2L 4184648 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_21_4180001 chr2L_4180001 RAL-307_125b 164 chr2L 4231713 4231785 chr2L 4232062 4232134 35 347 10.0 5.5 7.8 4.0 421 chr2L 4231713 intergenic not near genes chr2L 4231924 intergenic not near genes chr2L 4232134 intergenic not near genes chr2L_35_4230001 chr2L_4230001 RAL-307_125b 165 chr2L 4265448 4265488 chr2L 4265584 4265624 18 135 12.5 9.0 10.8 1.5 176 chr2L 4265448 intergenic not near genes chr2L 4265536 intergenic not near genes chr2L 4265624 intergenic not near genes chr2L_18_4265001 chr2L_4265001 RAL-307_125b 166 chr2L 4351432 4351501 chr2L 4351548 4351633 23 123 7.5 1.0 4.2 4.4 201 chr2L 4351432 5` UTR CR44700 + chr2L 4351532 intergenic CR44700 + chr2L 4351633 intergenic CR44700 + chr2L_23_4350001 chr2L_4350001 RAL-307_125b 167 chr2L 4419554 4419629 chr2L 4419827 4419882 39 272 9.5 7.5 8.5 4.1 328 chr2L 4419554 intron CG15431 - chr2L 4419718 intron CG15431 - chr2L 4419882 intron CG15431 - chr2L_39_4415001 chr2L_4415001 RAL-307_125b 168 chr2L 4601661 4601734 chr2L 4609146 4609194 mdg1 28 7487 10.0 7.0 8.5 2.9 7533 chr2L 4601661 intron dp - chr2L 4605428 intron dp - chr2L 4609194 intron dp - chr2L_28_4605001 chr2L_4605001 RAL-307_125b 169 chr2L 4661796 4661821 chr2L 4669426 4669451 opus 6 7630 9.0 10.0 9.5 0.6 7655 chr2L 4661796 intergenic not near genes chr2L 4665624 intergenic not near genes chr2L 4669451 intergenic not near genes chr2L_6_4665001 chr2L_4665001 RAL-307_125b 170 chr2L 4661825 4661849 chr2L 4669423 4669478 opus 8 7621 5.0 9.5 7.2 1.0 7653 chr2L 4661825 intergenic not near genes chr2L 4665652 intergenic not near genes chr2L 4669478 intergenic not near genes chr2L_8_4665001 chr2L_4665001 RAL-307_125b 171 chr2L 4670075 4670151 chr2L 4670374 4670405 23 293 4.0 6.5 5.2 3.7 330 chr2L 4670075 intergenic not near genes chr2L 4670240 intergenic not near genes chr2L 4670405 intergenic not near genes chr2L_23_4670001 chr2L_4670001 RAL-307_125b 172 chr2L 4819448 4819517 chr2L 4819621 4819690 21 172 6.5 9.0 7.8 2.4 242 chr2L 4819448 intergenic not near genes chr2L 4819569 intergenic not near genes chr2L 4819690 intergenic not near genes chr2L_21_4815001 chr2L_4815001 RAL-307_125b 173 chr2L 4918130 4918204 chr2L 4923253 4923365 jockey 29 5152 8.0 0.0 4.0 5.8 5235 chr2L 4918130 intron hoe1 - chr2L 4920748 intron hoe1 - chr2L 4923365 intron hoe1 - chr2L_29_4920001 chr2L_4920001 RAL-307_125b 174 chr2L 4923249 4923256 chr2L 4923390 4923397 6 141 0.0 18.5 9.2 0.6 148 chr2L 4923249 intron hoe1 - chr2L 4923323 intron hoe1 - chr2L 4923397 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-307_125b 175 chr2L 4929108 4929156 chr2L 4929227 4929290 19 133 9.0 7.5 8.2 2.1 182 chr2L 4929108 intron hoe1 - chr2L 4929199 intron hoe1 - chr2L 4929290 intron hoe1 - chr2L_19_4925001 chr2L_4925001 RAL-307_125b 176 chr2L 4953466 4953511 chr2L 4953756 4953774 pogo 4 284 13.0 6.0 9.5 0.4 308 chr2L 4953466 intergenic Jon25Bii - chr2L 4953620 intergenic Jon25Bii - chr2L 4953774 intergenic not near genes chr2L_4_4950001 chr2L_4950001 RAL-307_125b 177 chr2L 5025088 5025165 chr2L 5025214 5025280 34 123 10.5 6.0 8.2 3.7 192 chr2L 5025088 intron vkg - chr2L 5025184 intron vkg - chr2L 5025280 intron vkg - chr2L_34_5025001 chr2L_5025001 RAL-307_125b 178 chr2L 5037900 5037914 chr2L 5038041 5038048 5 140 10.5 0.5 5.5 0.8 148 chr2L 5037900 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5037974 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038048 5` UTR,5` UTR CG14042 +,SP555 + chr2L_5_5035001 chr2L_5035001 RAL-307_125b 179 chr2L 5084998 5085017 chr2L 5085139 5085159 11 142 18.5 5.5 12.0 0.8 161 chr2L 5084998 intron pgant5 - chr2L 5085078 intron pgant5 - chr2L 5085159 intron pgant5 - chr2L_11_5085001 chr2L_5085001 RAL-307_125b 180 chr2L 5085019 5085036 chr2L 5085161 5085178 13 141 10.0 13.5 11.8 1.0 159 chr2L 5085019 intron pgant5 - chr2L 5085098 intron pgant5 - chr2L 5085178 intron pgant5 - chr2L_13_5085001 chr2L_5085001 RAL-307_125b 181 chr2L 5085037 5085069 chr2L 5085159 5085192 4 129 1.0 12.5 6.8 0.5 155 chr2L 5085037 intron pgant5 - chr2L 5085114 intron pgant5 - chr2L 5085192 intron pgant5 - chr2L_4_5085001 chr2L_5085001 RAL-307_125b 182 chr2L 5120927 5120995 chr2L 5121071 5121139 32 142 15.5 5.5 10.5 2.8 212 chr2L 5120927 intron Msp300 + chr2L 5121033 intron Msp300 + chr2L 5121139 intron Msp300 + chr2L_32_5120001 chr2L_5120001 RAL-307_125b 183 chr2L 5147673 5147752 chr2L 5147955 5148034 29 280 5.0 6.0 5.5 4.5 361 chr2L 5147673 intron Msp300 + chr2L 5147854 intron Msp300 + chr2L 5148034 intron Msp300 + chr2L_29_5145001 chr2L_5145001 RAL-307_125b 184 chr2L 5262492 5262541 chr2L 5262608 5262668 12 115 8.5 5.0 6.8 1.5 176 chr2L 5262492 intron tkv - chr2L 5262580 intron tkv - chr2L 5262668 intron tkv - chr2L_12_5260001 chr2L_5260001 RAL-307_125b 185 chr2L 5265720 5265794 chr2L 5265913 5265987 35 192 6.5 9.0 7.8 4.0 267 chr2L 5265720 intron,exon tkv -,Cyp4ac1 + chr2L 5265854 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265987 intron tkv - chr2L_35_5265001 chr2L_5265001 RAL-307_125b 186 chr2L 5342728 5342788 chr2L 5345158 5345218 Doc 28 2430 14.0 13.5 13.8 1.9 2490 chr2L 5342728 intergenic CG12512 - chr2L 5343973 intergenic not near genes chr2L 5345218 intergenic not near genes chr2L_28_5340001 chr2L_5340001 RAL-307_125b 187 chr2L 5378382 5378449 chr2L 5378511 5378578 35 128 6.5 7.5 7.0 4.4 196 chr2L 5378382 intergenic not near genes chr2L 5378480 intergenic not near genes chr2L 5378578 intergenic not near genes chr2L_35_5375001 chr2L_5375001 RAL-307_125b 188 chr2L 5448011 5448019 chr2L 5448145 5448148 8 133 0.0 3.0 1.5 3.2 137 chr2L 5448011 intergenic not near genes chr2L 5448080 intergenic not near genes chr2L 5448148 intergenic not near genes chr2L_8_5445001 chr2L_5445001 RAL-307_125b 189 chr2L 5508481 5508501 chr2L 5508608 5508628 8 127 12.5 6.5 9.5 0.8 147 chr2L 5508481 intergenic not near genes chr2L 5508554 intergenic not near genes chr2L 5508628 intergenic not near genes chr2L_8_5505001 chr2L_5505001 RAL-307_125b 190 chr2L 5508503 5508556 chr2L 5508606 5508682 22 123 6.0 6.5 6.2 3.1 179 chr2L 5508503 intergenic not near genes chr2L 5508592 intergenic not near genes chr2L 5508682 intergenic not near genes chr2L_22_5505001 chr2L_5505001 RAL-307_125b 191 chr2L 5509302 5509347 chr2L 5509450 5509489 23 148 7.5 0.5 4.0 4.6 187 chr2L 5509302 intergenic not near genes chr2L 5509396 intergenic not near genes chr2L 5509489 intergenic not near genes chr2L_23_5505001 chr2L_5505001 RAL-307_125b 192 chr2L 5550095 5550135 chr2L 5550203 5550265 4 125 2.5 3.0 2.8 1.1 170 chr2L 5550095 exon CG14014 - chr2L 5550180 exon CG14014 - chr2L 5550265 exon CG14014 - chr2L_4_5550001 chr2L_5550001 RAL-307_125b 193 chr2L 5563645 5563670 chr2L 5563779 5563804 11 134 1.0 15.0 8.0 1.2 159 chr2L 5563645 intergenic GluRIIB + chr2L 5563724 intergenic GluRIIB + chr2L 5563804 intergenic GluRIIB + chr2L_11_5560001 chr2L_5560001 RAL-307_125b 194 chr2L 5563675 5563712 chr2L 5563773 5563846 13 131 0.0 13.0 6.5 1.7 171 chr2L 5563675 intergenic GluRIIB + chr2L 5563760 intergenic GluRIIB + chr2L 5563846 intergenic GluRIIB + chr2L_13_5560001 chr2L_5560001 RAL-307_125b 195 chr2L 5594271 5594345 chr2L 5594413 5594487 22 140 7.0 12.0 9.5 2.1 216 chr2L 5594271 intergenic not near genes chr2L 5594379 intergenic not near genes chr2L 5594487 intergenic not near genes chr2L_22_5590001 chr2L_5590001 RAL-307_125b 196 chr2L 5646638 5646678 chr2L 5646775 5646784 5 131 11.0 13.5 12.2 0.4 146 chr2L 5646638 intron CG31646 - chr2L 5646711 intron CG31646 - chr2L 5646784 intron CG31646 - chr2L_5_5645001 chr2L_5645001 RAL-307_125b 197 chr2L 5666243 5666323 chr2L 5666381 5666463 20 136 4.0 4.0 4.0 4.0 220 chr2L 5666243 intron Hsp60C + chr2L 5666353 intron Hsp60C + chr2L 5666463 intron Hsp60C + chr2L_20_5665001 chr2L_5665001 RAL-307_125b 198 chr2L 5667631 5667677 chr2L 5667733 5667749 14 120 11.0 11.0 11.0 1.2 118 chr2L 5667631 intron Hsp60C + chr2L 5667690 intron Hsp60C + chr2L 5667749 intron Hsp60C + chr2L_14_5665001 chr2L_5665001 RAL-307_125b 199 chr2L 5686410 5686444 chr2L 5686542 5686575 23 131 13.5 18.5 16.0 1.4 165 chr2L 5686410 intergenic not near genes chr2L 5686492 intergenic not near genes chr2L 5686575 intergenic not near genes chr2L_23_5685001 chr2L_5685001 RAL-307_125b 200 chr2L 5695811 5695887 chr2L 5695953 5696029 51 141 8.5 7.0 7.8 5.8 218 chr2L 5695811 intergenic not near genes chr2L 5695920 intergenic not near genes chr2L 5696029 intergenic not near genes chr2L_51_5695001 chr2L_5695001 RAL-307_125b 201 chr2L 5749853 5749880 chr2L 5749983 5750000 6 124 12.5 5.0 8.8 0.6 147 chr2L 5749853 intron CG11030 + chr2L 5749926 intron CG11030 + chr2L 5750000 intron CG11030 + chr2L_6_5745001 chr2L_5745001 RAL-307_125b 202 chr2L 5749884 5749928 chr2L 5749981 5750050 9 101 7.0 3.0 5.0 1.5 166 chr2L 5749884 intron CG11030 + chr2L 5749967 intron CG11030 + chr2L 5750050 intron CG11030 + chr2L_9_5745001 chr2L_5745001 RAL-307_125b 203 chr2L 5764869 5764873 chr2L 5765028 5765032 4 159 7.0 15.5 11.2 0.3 163 chr2L 5764869 intron obst-E - chr2L 5764950 intron obst-E - chr2L 5765032 intron obst-E - chr2L_4_5760001 chr2L_5760001 RAL-307_125b 204 chr2L 5764875 5764927 chr2L 5765021 5765085 4 155 0.0 13.5 6.8 0.5 210 chr2L 5764875 intron obst-E - chr2L 5764980 intron obst-E - chr2L 5765085 intron obst-E - chr2L_4_5760001 chr2L_5760001 RAL-307_125b 205 chr2L 5806203 5806240 chr2L 5806356 5806393 21 151 13.0 11.0 12.0 1.6 190 chr2L 5806203 intron CG11034 + chr2L 5806298 intron CG11034 + chr2L 5806393 intron CG11034 + chr2L_21_5805001 chr2L_5805001 RAL-307_125b 206 chr2L 5827669 5827741 chr2L 5836727 5836749 roo 25 9052 12.0 13.0 12.5 1.9 9080 chr2L 5827669 intron TrissinR + chr2L 5832209 intron TrissinR + chr2L 5836749 intron TrissinR + chr2L_25_5830001 chr2L_5830001 RAL-307_125b 207 chr2L 5839119 5839169 chr2L 5839258 5839304 7 132 13.0 8.0 10.5 0.6 185 chr2L 5839119 intron TrissinR + chr2L 5839212 intron TrissinR + chr2L 5839304 intron TrissinR + chr2L_7_5835001 chr2L_5835001 RAL-307_125b 208 chr2L 5839174 5839185 chr2L 5839253 5839274 12 106 10.5 7.0 8.8 1.2 100 chr2L 5839174 intron TrissinR + chr2L 5839224 intron TrissinR + chr2L 5839274 intron TrissinR + chr2L_12_5835001 chr2L_5835001 RAL-307_125b 209 chr2L 5887556 5887624 chr2L 5887687 5887755 40 130 12.0 13.5 12.8 2.9 199 chr2L 5887556 3` UTR CR44577 - chr2L 5887656 3` UTR CR44577 - chr2L 5887755 3` UTR CR44577 - chr2L_40_5885001 chr2L_5885001 RAL-307_125b 210 chr2L 5897549 5897617 chr2L 5897682 5897750 32 124 13.0 12.0 12.5 2.4 201 chr2L 5897549 intergenic not near genes chr2L 5897650 intergenic not near genes chr2L 5897750 intergenic not near genes chr2L_32_5895001 chr2L_5895001 RAL-307_125b 211 chr2L 5900214 5900291 chr2L 5900356 5900396 35 133 8.0 15.0 11.5 2.8 182 chr2L 5900214 3` UTR CR44579 - chr2L 5900305 3` UTR CR44579 - chr2L 5900396 intergenic CR44579 - chr2L_35_5900001 chr2L_5900001 RAL-307_125b 212 chr2L 5904413 5904433 chr2L 5904543 5904563 9 129 13.0 0.5 6.8 1.2 150 chr2L 5904413 exon CG9021 - chr2L 5904488 intron CG9021 - chr2L 5904563 intron CG9021 - chr2L_9_5900001 chr2L_5900001 RAL-307_125b 213 chr2L 5922763 5922969 chr2L 5922902 5923069 12 137 3.0 0.0 1.5 4.8 306 chr2L 5922763 3` UTR bchs + chr2L 5922916 3` UTR CG9016 - chr2L 5923069 3` UTR CG9016 - chr2L_12_5920001 chr2L_5920001 RAL-307_125b 214 chr2L 5926218 5926453 chr2L 5926348 5926591 15 169 0.0 0.0 0.0 15.0 373 chr2L 5926218 intron dsf + chr2L 5926404 intron dsf + chr2L 5926591 intron dsf + chr2L_15_5925001 chr2L_5925001 RAL-307_125b 215 chr2L 5960631 5960671 chr2L 5960841 5960874 28 209 7.5 2.0 4.8 4.8 243 chr2L 5960631 intergenic Vm26Aa - chr2L 5960752 intergenic Vm26Aa - chr2L 5960874 intergenic not near genes chr2L_28_5960001 chr2L_5960001 RAL-307_125b 216 chr2L 5962232 5962258 chr2L 5962358 5962378 16 125 20.0 11.5 15.8 1.0 146 chr2L 5962232 intergenic not near genes chr2L 5962305 intergenic not near genes chr2L 5962378 intergenic not near genes chr2L_16_5960001 chr2L_5960001 RAL-307_125b 217 chr2L 6007052 6007070 chr2L 6007178 6007196 12 126 17.5 3.0 10.2 1.1 144 chr2L 6007052 intergenic Gal -,CG9098 - chr2L 6007124 intergenic CG9098 -,Gal - chr2L 6007196 intergenic CG9098 -,Gal - chr2L_12_6005001 chr2L_6005001 RAL-307_125b 218 chr2L 6050394 6050468 chr2L 6050548 6050622 36 153 6.5 8.0 7.2 4.4 228 chr2L 6050394 3` UTR CG12393 + chr2L 6050508 intergenic CG12393 +,CG9135 + chr2L 6050622 intergenic CG12393 +,CG9135 + chr2L_36_6050001 chr2L_6050001 RAL-307_125b 219 chr2L 6137725 6137789 chr2L 6137864 6137935 21 140 6.5 1.0 3.8 4.4 210 chr2L 6137725 intergenic not near genes chr2L 6137830 intergenic not near genes chr2L 6137935 intergenic not near genes chr2L_21_6135001 chr2L_6135001 RAL-307_125b 220 chr2L 6185396 6185469 chr2L 6185520 6185594 28 120 7.0 14.0 10.5 2.4 198 chr2L 6185396 intron CG34380 + chr2L 6185495 intron CG34380 + chr2L 6185594 intron CG34380 + chr2L_28_6185001 chr2L_6185001 RAL-307_125b 221 chr2L 6253571 6253632 chr2L 6253697 6253758 25 126 9.5 8.0 8.8 2.6 187 chr2L 6253571 intron Ddr + chr2L 6253664 intron Ddr + chr2L 6253758 intron Ddr + chr2L_25_6250001 chr2L_6250001 RAL-307_125b 222 chr2L 6255272 6255336 chr2L 6255399 6255463 38 124 15.0 12.5 13.8 2.6 191 chr2L 6255272 intron Ddr + chr2L 6255368 intron Ddr + chr2L 6255463 intron Ddr + chr2L_38_6255001 chr2L_6255001 RAL-307_125b 223 chr2L 6283908 6283916 chr2L 6284056 6284076 7 157 13.5 0.0 6.8 0.9 168 chr2L 6283908 intron Ddr + chr2L 6283992 intron Ddr + chr2L 6284076 intron Ddr + chr2L_7_6280001 chr2L_6280001 RAL-307_125b 224 chr2L 6312360 6312363 chr2L 6312452 6312490 4 118 0.0 13.5 6.8 0.5 130 chr2L 6312360 intron Ddr + chr2L 6312425 intron Ddr + chr2L 6312490 intron Ddr + chr2L_4_6310001 chr2L_6310001 RAL-307_125b 225 chr2L 6316291 6316310 chr2L 6316429 6316448 9 138 0.0 14.0 7.0 1.1 157 chr2L 6316291 intron Ddr + chr2L 6316370 intron Ddr + chr2L 6316448 intron Ddr + chr2L_9_6315001 chr2L_6315001 RAL-307_125b 226 chr2L 6349028 6349075 chr2L 6349156 6349203 28 126 6.5 5.5 6.0 4.0 175 chr2L 6349028 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349203 intergenic CG9498 - chr2L_28_6345001 chr2L_6345001 RAL-307_125b 227 chr2L 6357777 6357795 chr2L 6357897 6357906 4 120 8.5 9.5 9.0 0.4 129 chr2L 6357777 exon CG9500 - chr2L 6357842 exon CG9500 - chr2L 6357906 exon CG9500 - chr2L_4_6355001 chr2L_6355001 RAL-307_125b 228 chr2L 6357813 6357832 chr2L 6357886 6357927 5 92 1.5 7.0 4.2 1.0 114 chr2L 6357813 exon CG9500 - chr2L 6357870 exon CG9500 - chr2L 6357927 exon CG9500 - chr2L_5_6355001 chr2L_6355001 RAL-307_125b 229 chr2L 6363105 6363179 chr2L 6366077 6366146 Burdock 22 2966 6.5 5.0 5.8 3.2 3041 chr2L 6363105 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366146 intergenic not near genes chr2L_22_6360001 chr2L_6360001 RAL-307_125b 230 chr2L 6426811 6426878 chr2L 6445119 6445187 roo 32 18309 10.0 9.0 9.5 3.0 18376 chr2L 6426811 3` UTR CG9527 - chr2L 6435999 intron CG9527 - chr2L 6445187 exon CG9527 - chr2L_32_6435001 chr2L_6435001 RAL-307_125b 231 chr2L 6463535 6463578 chr2L 6463656 6463672 8 121 6.0 5.5 5.8 1.2 137 chr2L 6463535 exon CG16947 - chr2L 6463604 exon CG16947 - chr2L 6463672 exon CG16947 - chr2L_8_6460001 chr2L_6460001 RAL-307_125b 232 chr2L 6590071 6590123 chr2L 6590177 6590245 23 117 6.0 1.5 3.8 4.8 174 chr2L 6590071 intron CG11319 - chr2L 6590158 intron CG11319 - chr2L 6590245 intron CG11319 - chr2L_23_6590001 chr2L_6590001 RAL-307_125b 233 chr2L 6772544 6772592 chr2L 6772677 6772720 9 126 11.5 12.5 12.0 0.7 176 chr2L 6772544 intron CG11321 - chr2L 6772632 5` UTR CG11321 - chr2L 6772720 5` UTR CG11321 - chr2L_9_6770001 chr2L_6770001 RAL-307_125b 234 chr2L 6799494 6799526 chr2L 6799632 6799664 18 137 14.0 6.0 10.0 1.6 170 chr2L 6799494 5` UTR CR43610 + chr2L 6799579 5` UTR CR43610 + chr2L 6799664 intergenic CR43610 +,CG17376 - chr2L_18_6795001 chr2L_6795001 RAL-307_125b 235 chr2L 6799527 6799560 chr2L 6799625 6799698 10 130 10.5 2.5 6.5 1.3 171 chr2L 6799527 5` UTR CR43610 + chr2L 6799612 intergenic CR43610 +,CG17376 - chr2L 6799698 intergenic CR43610 +,CG17376 - chr2L_10_6795001 chr2L_6795001 RAL-307_125b 236 chr2L 6818078 6818141 chr2L 6818217 6818278 17 139 1.5 11.0 6.2 2.4 200 chr2L 6818078 intergenic not near genes chr2L 6818178 intergenic not near genes chr2L 6818278 intergenic not near genes chr2L_17_6815001 chr2L_6815001 RAL-307_125b 237 chr2L 6867746 6867775 chr2L 6867886 6867900 19 139 11.5 17.0 14.2 1.2 154 chr2L 6867746 intron Nha1 - chr2L 6867823 intron Nha1 - chr2L 6867900 intron Nha1 - chr2L_19_6865001 chr2L_6865001 RAL-307_125b 238 chr2L 6876759 6876810 chr2L 6882968 6883021 diver 17 6220 10.5 8.0 9.2 1.7 6262 chr2L 6876759 intron Nlg2 + chr2L 6879890 intron Nlg2 + chr2L 6883021 intron Nlg2 + chr2L_17_6875001 chr2L_6875001 RAL-307_125b 239 chr2L 6969234 6969302 chr2L 6969359 6969432 40 125 5.0 12.0 8.5 4.2 198 chr2L 6969234 3` UTR snRNP-U1-70K - chr2L 6969333 3` UTR snRNP-U1-70K - chr2L 6969432 3` UTR snRNP-U1-70K - chr2L_40_6965001 chr2L_6965001 RAL-307_125b 240 chr2L 6973263 6973334 chr2L 6973437 6973508 39 172 8.5 10.0 9.2 3.8 245 chr2L 6973263 3` UTR uif - chr2L 6973386 3` UTR uif - chr2L 6973508 exon uif - chr2L_39_6970001 chr2L_6970001 RAL-307_125b 241 chr2L 6991366 6991429 chr2L 6998550 6998602 HMS-Beagle 7 7180 0.0 5.0 2.5 2.0 7236 chr2L 6991366 intron uif - chr2L 6994984 intron uif - chr2L 6998602 intron uif - chr2L_7_6990001 chr2L_6990001 RAL-307_125b 242 chr2L 7042029 7042087 chr2L 7042160 7042199 25 137 7.5 4.0 5.8 3.7 170 chr2L 7042029 intron milt + chr2L 7042114 intron milt + chr2L 7042199 intron milt + chr2L_25_7040001 chr2L_7040001 RAL-307_125b 243 chr2L 7071953 7071962 chr2L 7072087 7072096 6 134 5.5 2.5 4.0 1.2 143 chr2L 7071953 intron Pvf2 - chr2L 7072024 intron Pvf2 - chr2L 7072096 intron Pvf2 - chr2L_6_7070001 chr2L_7070001 RAL-307_125b 244 chr2L 7081655 7081698 chr2L 7081786 7081829 21 130 20.0 7.0 13.5 1.4 174 chr2L 7081655 intron Pvf2 - chr2L 7081742 intron Pvf2 - chr2L 7081829 intron Pvf2 - chr2L_21_7080001 chr2L_7080001 RAL-307_125b 245 chr2L 7082852 7082887 chr2L 7082989 7083024 18 137 13.5 20.0 16.8 1.0 172 chr2L 7082852 intron Pvf2 - chr2L 7082938 intron Pvf2 - chr2L 7083024 intron Pvf2 - chr2L_18_7080001 chr2L_7080001 RAL-307_125b 246 chr2L 7089826 7089857 chr2L 7089989 7089993 9 153 15.5 5.0 10.2 0.8 167 chr2L 7089826 intergenic not near genes chr2L 7089910 intergenic not near genes chr2L 7089993 intergenic not near genes chr2L_9_7085001 chr2L_7085001 RAL-307_125b 247 chr2L 7089861 7089902 chr2L 7089988 7090053 12 144 6.5 5.0 5.8 1.8 192 chr2L 7089861 intergenic not near genes chr2L 7089957 intergenic not near genes chr2L 7090053 intergenic not near genes chr2L_12_7085001 chr2L_7085001 RAL-307_125b 248 chr2L 7114974 7115031 chr2L 7115158 7115163 15 174 0.5 14.5 7.5 1.8 189 chr2L 7114974 intron Pvf3 - chr2L 7115068 intron Pvf3 - chr2L 7115163 intron Pvf3 - chr2L_15_7115001 chr2L_7115001 RAL-307_125b 249 chr2L 7197950 7198020 chr2L 7198079 7198149 28 126 6.5 7.5 7.0 3.5 199 chr2L 7197950 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198149 intron CG4502 - chr2L_28_7195001 chr2L_7195001 RAL-307_125b 250 chr2L 7244697 7244747 chr2L 7244872 7244922 19 170 9.5 3.5 6.5 2.5 225 chr2L 7244697 intron Ndae1 - chr2L 7244810 intron Ndae1 - chr2L 7244922 intron Ndae1 - chr2L_19_7240001 chr2L_7240001 RAL-307_125b 251 chr2L 7295953 7296023 chr2L 7296141 7296211 17 186 6.0 5.5 5.8 2.5 258 chr2L 7295953 intergenic not near genes chr2L 7296082 intergenic not near genes chr2L 7296211 intergenic not near genes chr2L_17_7295001 chr2L_7295001 RAL-307_125b 252 chr2L 7343283 7343358 chr2L 7350449 7350449 roo 13 7155 5.0 11.0 8.0 1.4 7166 chr2L 7343283 intron Wnt6 + chr2L 7346866 intron Wnt6 + chr2L 7350449 intron Wnt6 + chr2L_13_7345001 chr2L_7345001 RAL-307_125b 253 chr2L 7399258 7399329 chr2L 7399678 7399751 39 421 0.5 10.5 5.5 6.0 493 chr2L 7399258 intergenic not near genes chr2L 7399504 intergenic not near genes chr2L 7399751 intergenic not near genes chr2L_39_7395001 chr2L_7395001 RAL-307_125b 254 chr2L 7436146 7436220 chr2L 7436290 7436364 33 143 8.0 8.0 8.0 3.7 218 chr2L 7436146 intergenic not near genes chr2L 7436255 intergenic not near genes chr2L 7436364 intergenic not near genes chr2L_33_7435001 chr2L_7435001 RAL-307_125b 255 chr2L 7439889 7439907 chr2L 7440310 7440329 6 420 26.0 9.5 17.8 0.3 440 chr2L 7439889 intron CG5973 + chr2L 7440109 intron CG5973 + chr2L 7440329 intron CG5973 + chr2L_6_7440001 chr2L_7440001 RAL-307_125b 256 chr2L 7439908 7439968 chr2L 7440309 7440379 18 416 8.0 9.0 8.5 1.9 471 chr2L 7439908 intron CG5973 + chr2L 7440144 intron CG5973 + chr2L 7440379 intron CG5973 + chr2L_18_7440001 chr2L_7440001 RAL-307_125b 257 chr2L 7459150 7459227 chr2L 7459361 7459449 10 213 11.0 0.0 5.5 1.5 299 chr2L 7459150 intron Gr28b - chr2L 7459300 intron Gr28b - chr2L 7459449 intron Gr28b - chr2L_10_7455001 chr2L_7455001 RAL-307_125b 258 chr2L 7460998 7461073 chr2L 7461303 7461337 46 302 7.5 8.5 8.0 5.1 339 chr2L 7460998 intron Gr28b - chr2L 7461168 intron Gr28b - chr2L 7461337 intron Gr28b - chr2L_46_7460001 chr2L_7460001 RAL-307_125b 259 chr2L 5904538 5904540 chr2L 7466148 7466149 13 1561609 1.5 17.0 9.2 1.3 1561611 chr2L 5904538 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_13_6685001 chr2L_6685001 RAL-307_125b 260 chr2L 7493354 7493421 chr2L 7493495 7493557 21 134 0.0 12.5 6.2 2.9 203 chr2L 7493354 intron Ziz - chr2L 7493456 intron Ziz - chr2L 7493557 intron Ziz - chr2L_21_7490001 chr2L_7490001 RAL-307_125b 261 chr2L 7502708 7502770 chr2L 7502814 7502846 13 110 11.5 12.5 12.0 1.0 138 chr2L 7502708 intron RapGAP1 - chr2L 7502777 intron RapGAP1 - chr2L 7502846 intron RapGAP1 - chr2L_13_7500001 chr2L_7500001 RAL-307_125b 262 chr2L 7548072 7548103 chr2L 7550558 7550569 Burdock 5 2477 8.5 9.5 9.0 0.5 2497 chr2L 7548072 intron RapGAP1 - chr2L 7549320 intron RapGAP1 - chr2L 7550569 intron RapGAP1 - chr2L_5_7545001 chr2L_7545001 RAL-307_125b 263 chr2L 7555191 7555234 chr2L 7555308 7555360 20 124 0.5 13.0 6.8 2.6 169 chr2L 7555191 intron RapGAP1 - chr2L 7555276 intron RapGAP1 - chr2L 7555360 intron RapGAP1 - chr2L_20_7555001 chr2L_7555001 RAL-307_125b 264 chr2L 7579147 7579230 chr2L 7579387 7579460 BS 13 239 0.0 0.0 0.0 13.0 313 chr2L 7579147 intergenic RapGAP1 - chr2L 7579304 intergenic RapGAP1 - chr2L 7579460 intergenic RapGAP1 - chr2L_13_7575001 chr2L_7575001 RAL-307_125b 265 chr2L 7579841 7579922 chr2L 7579973 7580039 34 130 7.5 8.0 7.8 3.9 198 chr2L 7579841 intergenic not near genes chr2L 7579940 intergenic not near genes chr2L 7580039 intergenic not near genes chr2L_34_7575001 chr2L_7575001 RAL-307_125b 266 chr2L 7585456 7585496 chr2L 7585605 7585645 10 146 7.0 4.5 5.8 1.5 189 chr2L 7585456 intergenic not near genes chr2L 7585550 intergenic not near genes chr2L 7585645 intergenic not near genes chr2L_10_7585001 chr2L_7585001 RAL-307_125b 267 chr2L 7625142 7625192 chr2L 7625290 7625340 21 147 5.5 15.5 10.5 1.8 198 chr2L 7625142 intergenic not near genes chr2L 7625241 intergenic not near genes chr2L 7625340 intergenic not near genes chr2L_21_7625001 chr2L_7625001 RAL-307_125b 268 chr2L 7633399 7633465 chr2L 7633545 7633614 13 146 5.5 4.5 5.0 2.2 215 chr2L 7633399 intergenic not near genes chr2L 7633506 intergenic not near genes chr2L 7633614 intergenic not near genes chr2L_13_7630001 chr2L_7630001 RAL-307_125b 269 chr2L 7636325 7636373 chr2L 7636479 7636527 19 152 7.5 8.5 8.0 2.1 202 chr2L 7636325 5` UTR CR44799 + chr2L 7636426 intron CR44799 + chr2L 7636527 5` UTR CR44799 + chr2L_19_7635001 chr2L_7635001 RAL-307_125b 270 chr2L 7640376 7640419 chr2L 7640512 7640555 20 134 7.0 3.0 5.0 3.3 179 chr2L 7640376 intergenic not near genes chr2L 7640466 intergenic not near genes chr2L 7640555 intergenic not near genes chr2L_20_7640001 chr2L_7640001 RAL-307_125b 271 chr2L 7649976 7650045 chr2L 7650102 7650183 14 133 4.5 0.0 2.2 4.4 207 chr2L 7649976 intron Slob - chr2L 7650080 intron Slob - chr2L 7650183 intron Slob - chr2L_14_7650001 chr2L_7650001 RAL-307_125b 272 chr2L 7769732 7769800 chr2L 7769942 7770010 17 208 8.0 8.5 8.2 1.8 278 chr2L 7769732 intron CG7191 + chr2L 7769871 intron CG7191 + chr2L 7770010 intron CG7191 + chr2L_17_7765001 chr2L_7765001 RAL-307_125b 273 chr2L 7781286 7781304 chr2L 7781423 7781441 6 136 0.5 17.5 9.0 0.6 155 chr2L 7781286 3` UTR Uro + chr2L 7781364 3` UTR Uro + chr2L 7781441 intergenic CG7164 +,Uro + chr2L_6_7780001 chr2L_7780001 RAL-307_125b 274 chr2L 7796251 7796285 chr2L 7796388 7796422 8 137 9.0 19.0 14.0 0.5 171 chr2L 7796251 5` UTR CR44825 + chr2L 7796336 3` UTR Herp - chr2L 7796422 3` UTR Herp - chr2L_8_7795001 chr2L_7795001 RAL-307_125b 275 chr2L 7859537 7859563 chr2L 7859703 7859730 14 165 22.0 7.5 14.8 0.9 193 chr2L 7859537 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859634 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859730 3` UTR,intron lectin-28C +,TwdlE - chr2L_14_7855001 chr2L_7855001 RAL-307_125b 276 chr2L 7859566 7859613 chr2L 7859697 7859754 22 149 11.5 6.0 8.8 2.2 188 chr2L 7859566 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859660 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859754 3` UTR,intron lectin-28C +,TwdlE - chr2L_22_7855001 chr2L_7855001 RAL-307_125b 277 chr2L 7887657 7887677 chr2L 7887789 7887809 10 132 14.5 16.0 15.2 0.6 152 chr2L 7887657 intergenic Spn28Da -,CG7102 - chr2L 7887733 3` UTR Spn28Da - chr2L 7887809 exon Spn28Da - chr2L_10_7885001 chr2L_7885001 RAL-307_125b 278 chr2L 7922697 7922770 chr2L 7922828 7922901 30 130 10.0 9.0 9.5 2.9 204 chr2L 7922697 intron Snoo - chr2L 7922799 intron Snoo - chr2L 7922901 intron Snoo - chr2L_30_7920001 chr2L_7920001 RAL-307_125b 279 chr2L 7941149 7941192 chr2L 7941278 7941306 10 116 8.0 7.5 7.8 1.1 157 chr2L 7941149 intron Snoo - chr2L 7941228 intron Snoo - chr2L 7941306 intron Snoo - chr2L_10_7940001 chr2L_7940001 RAL-307_125b 280 chr2L 7952668 7952721 chr2L 7952854 7952908 13 182 0.5 5.0 2.8 3.4 240 chr2L 7952668 intron Snoo - chr2L 7952788 intron Snoo - chr2L 7952908 intron Snoo - chr2L_13_7950001 chr2L_7950001 RAL-307_125b 281 chr2L 7959027 7959072 chr2L 7960480 7960528 pogo 28 1456 6.5 11.5 9.0 2.8 1501 chr2L 7959027 intron Snoo - chr2L 7959778 intron Snoo - chr2L 7960528 intron Snoo - chr2L_28_7955001 chr2L_7955001 RAL-307_125b 282 chr2L 7977047 7977110 chr2L 7984073 7984136 297 11 7021 7.0 5.5 6.2 1.5 7089 chr2L 7977047 intron Snoo - chr2L 7980592 intron Snoo - chr2L 7984136 5` UTR,5` UTR Snoo -,CG7231 + chr2L_11_7980001 chr2L_7980001 RAL-307_125b 283 chr2L 7997011 7997055 chr2L 7997161 7997172 13 147 2.0 0.0 1.0 6.5 161 chr2L 7997011 intron CG7227 - chr2L 7997092 intron CG7227 - chr2L 7997172 intron CG7227 - chr2L_13_7995001 chr2L_7995001 RAL-307_125b 284 chr2L 8013574 8013584 chr2L 8018828 8018838 copia 4 5254 27.5 0.0 13.8 0.3 5264 chr2L 8013574 intron Tg + chr2L 8016206 intron Tg + chr2L 8018838 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-307_125b 285 chr2L 8013602 8013632 chr2L 8023588 8023617 copia 10 9984 14.5 7.0 10.8 0.8 10015 chr2L 8013602 intron Tg + chr2L 8018610 intron Tg + chr2L 8023617 intron Tg + chr2L_10_8015001 chr2L_8015001 RAL-307_125b 286 chr2L 8018820 8018837 chr2L 8023621 8023624 Doc 9 4818 0.0 16.0 8.0 1.0 4804 chr2L 8018820 intron Tg + chr2L 8021222 intron Tg + chr2L 8023624 intron Tg + chr2L_9_8020001 chr2L_8020001 RAL-307_125b 287 chr2L 8032588 8032622 chr2L 8032727 8032761 10 138 7.5 0.0 3.8 2.1 173 chr2L 8032588 intron,exon CG7367 -,Cka + chr2L 8032674 intron,intron CG7367 -,Cka + chr2L 8032761 intron,intron CG7367 -,Cka + chr2L_10_8030001 chr2L_8030001 RAL-307_125b 288 chr2L 8034569 8034580 chr2L 8034708 8034709 6 144 19.5 11.0 15.2 0.4 140 chr2L 8034569 intron,intron CG7367 -,Cka + chr2L 8034639 intron,intron CG7367 -,Cka + chr2L 8034709 intron,intron CG7367 -,Cka + chr2L_6_8030001 chr2L_8030001 RAL-307_125b 289 chr2L 8165099 8165104 chr2L 8165211 8165237 4 128 9.5 13.5 11.5 0.3 138 chr2L 8165099 intron Piezo + chr2L 8165168 intron Piezo + chr2L 8165237 intron Piezo + chr2L_4_8165001 chr2L_8165001 RAL-307_125b 290 chr2L 8165115 8165139 chr2L 8165198 8165273 13 128 4.0 10.0 7.0 1.6 158 chr2L 8165115 intron Piezo + chr2L 8165194 intron Piezo + chr2L 8165273 intron Piezo + chr2L_13_8165001 chr2L_8165001 RAL-307_125b 291 chr2L 8167106 8167169 chr2L 8167247 8167310 27 137 9.5 10.0 9.8 2.5 204 chr2L 8167106 intron Piezo + chr2L 8167208 intron Piezo + chr2L 8167310 intron Piezo + chr2L_27_8165001 chr2L_8165001 RAL-307_125b 292 chr2L 8230268 8230346 chr2L 8230402 8230465 27 133 7.5 5.5 6.5 3.6 197 chr2L 8230268 5` UTR Pvr - chr2L 8230366 intron Pvr - chr2L 8230465 intron Pvr - chr2L_27_8230001 chr2L_8230001 RAL-307_125b 293 chr2L 8244698 8244746 chr2L 8244855 8244918 24 164 3.5 3.5 3.5 5.3 220 chr2L 8244698 intron CG8086 - chr2L 8244808 intron CG8086 - chr2L 8244918 intron CG8086 - chr2L_24_8240001 chr2L_8240001 RAL-307_125b 294 chr2L 8266162 8266228 chr2L 8266346 8266412 18 184 6.5 8.0 7.2 2.2 250 chr2L 8266162 intron Btk29A - chr2L 8266287 intron Btk29A - chr2L 8266412 intron Btk29A - chr2L_18_8265001 chr2L_8265001 RAL-307_125b 295 chr2L 8271575 8271722 chr2L 8271700 8271872 23 130 1.0 2.0 1.5 9.2 297 chr2L 8271575 intron Btk29A - chr2L 8271724 intron Btk29A - chr2L 8271872 intron Btk29A - chr2L_23_8270001 chr2L_8270001 RAL-307_125b 296 chr2L 8331491 8331503 chr2L 8331633 8331645 8 141 15.0 2.0 8.5 0.8 154 chr2L 8331491 intron CG14275 + chr2L 8331568 intron CG14275 + chr2L 8331645 intron CG14275 + chr2L_8_8330001 chr2L_8330001 RAL-307_125b 297 chr2L 8336896 8336966 chr2L 8337020 8337064 16 124 1.5 6.5 4.0 3.2 168 chr2L 8336896 intergenic not near genes chr2L 8336980 intergenic not near genes chr2L 8337064 intergenic not near genes chr2L_16_8335001 chr2L_8335001 RAL-307_125b 298 chr2L 8350937 8350962 chr2L 8351210 8351235 13 273 0.5 6.5 3.5 2.9 298 chr2L 8350937 3` UTR CG7778 + chr2L 8351086 3` UTR CG7778 + chr2L 8351235 intergenic CG7778 + chr2L_13_8350001 chr2L_8350001 RAL-307_125b 299 chr2L 8430591 8430673 chr2L 8430744 8430826 24 148 5.5 7.0 6.2 3.3 235 chr2L 8430591 3` UTR Akap200 + chr2L 8430708 3` UTR Akap200 + chr2L 8430826 3` UTR Akap200 + chr2L_24_8430001 chr2L_8430001 RAL-307_125b 300 chr2L 8452377 8452446 chr2L 8461598 8461666 roo 39 9221 12.0 15.0 13.5 2.7 9289 chr2L 8452377 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461666 intron fu12 - chr2L_39_8455001 chr2L_8455001 RAL-307_125b 301 chr2L 8461792 8461867 chr2L 8461923 8461998 33 131 12.0 12.0 12.0 2.5 206 chr2L 8461792 intron fu12 - chr2L 8461895 intron fu12 - chr2L 8461998 intron fu12 - chr2L_33_8460001 chr2L_8460001 RAL-307_125b 302 chr2L 8493919 8493946 chr2L 8494055 8494082 9 136 12.0 20.5 16.2 0.5 163 chr2L 8493919 intron Dh31 - chr2L 8494000 intron Dh31 - chr2L 8494082 intron Dh31 - chr2L_9_8490001 chr2L_8490001 RAL-307_125b 303 chr2L 8502614 8502688 chr2L 8502748 8502823 21 132 9.5 3.5 6.5 2.8 209 chr2L 8502614 intron Dh31 - chr2L 8502718 intron Dh31 - chr2L 8502823 intron Dh31 - chr2L_21_8500001 chr2L_8500001 RAL-307_125b 304 chr2L 8553435 8553492 chr2L 8553632 8553689 14 193 9.0 9.5 9.2 1.4 254 chr2L 8553435 intron Sema-1a + chr2L 8553562 intron Sema-1a + chr2L 8553689 intron Sema-1a + chr2L_14_8550001 chr2L_8550001 RAL-307_125b 305 chr2L 8594428 8594488 chr2L 8601532 8601592 297 13 7104 5.5 8.5 7.0 1.6 7164 chr2L 8594428 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598010 intron Sema-1a + chr2L 8601592 intron Sema-1a + chr2L_13_8595001 chr2L_8595001 RAL-307_125b 306 chr2L 8607507 8607557 chr2L 8607657 8607695 13 144 6.5 11.0 8.8 1.3 188 chr2L 8607507 intron Sema-1a + chr2L 8607601 intron Sema-1a + chr2L 8607695 intron Sema-1a + chr2L_13_8605001 chr2L_8605001 RAL-307_125b 307 chr2L 8612790 8612867 chr2L 8612931 8612994 23 128 0.0 12.0 6.0 3.3 204 chr2L 8612790 intron Sema-1a + chr2L 8612892 intron Sema-1a + chr2L 8612994 intron Sema-1a + chr2L_23_8610001 chr2L_8610001 RAL-307_125b 308 chr2L 8654210 8654242 chr2L 8654337 8654361 8 124 2.0 7.5 4.8 1.4 151 chr2L 8654210 intron Sema-1a + chr2L 8654286 intron Sema-1a + chr2L 8654361 intron Sema-1a + chr2L_8_8650001 chr2L_8650001 RAL-307_125b 309 chr2L 8687033 8687094 chr2L 8687187 8687248 21 150 5.0 6.0 5.5 3.2 215 chr2L 8687033 exon Trs23 + chr2L 8687140 intergenic Hnf4 -,Trs23 + chr2L 8687248 3` UTR Hnf4 - chr2L_21_8685001 chr2L_8685001 RAL-307_125b 310 chr2L 8701488 8701570 chr2L 8701615 8701692 49 125 11.5 11.5 11.5 3.9 204 chr2L 8701488 intron Hnf4 - chr2L 8701590 intron Hnf4 - chr2L 8701692 intron Hnf4 - chr2L_49_8700001 chr2L_8700001 RAL-307_125b 311 chr2L 8704835 8704907 chr2L 8705100 8705149 32 261 13.5 8.0 10.8 2.7 314 chr2L 8704835 intron,5` UTR Hnf4 -,CR44992 + chr2L 8704992 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705149 intron,5` UTR Hnf4 -,CR44992 + chr2L_32_8700001 chr2L_8700001 RAL-307_125b 312 chr2L 8723070 8723139 chr2L 8731497 8731566 Tirant 31 8423 12.0 12.5 12.2 2.3 8496 chr2L 8723070 intron raw - chr2L 8727318 intron raw - chr2L 8731566 intron raw - chr2L_31_8725001 chr2L_8725001 RAL-307_125b 313 chr2L 8772788 8772819 chr2L 8772927 8772958 14 138 0.0 5.5 2.8 3.7 170 chr2L 8772788 intergenic CG9466 -,CG9465 - chr2L 8772873 intergenic CG9466 - chr2L 8772958 3` UTR CG9466 - chr2L_14_8770001 chr2L_8770001 RAL-307_125b 314 chr2L 8783932 8783953 chr2L 8784058 8784070 9 123 16.5 11.0 13.8 0.6 138 chr2L 8783932 intergenic not near genes chr2L 8784001 intergenic not near genes chr2L 8784070 intergenic not near genes chr2L_9_8780001 chr2L_8780001 RAL-307_125b 315 chr2L 8783955 8783967 chr2L 8784056 8784093 5 121 14.0 11.0 12.5 0.4 138 chr2L 8783955 intergenic not near genes chr2L 8784024 intergenic not near genes chr2L 8784093 intergenic not near genes chr2L_5_8780001 chr2L_8780001 RAL-307_125b 316 chr2L 8783968 8783985 chr2L 8784054 8784106 12 114 10.5 11.0 10.8 1.0 138 chr2L 8783968 intergenic not near genes chr2L 8784037 intergenic not near genes chr2L 8784106 intergenic not near genes chr2L_12_8780001 chr2L_8780001 RAL-307_125b 317 chr2L 8784654 8784724 chr2L 8784815 8784880 39 160 5.0 10.0 7.5 4.6 226 chr2L 8784654 intergenic not near genes chr2L 8784767 intergenic not near genes chr2L 8784880 intergenic not near genes chr2L_39_8780001 chr2L_8780001 RAL-307_125b 318 chr2L 8791279 8791303 chr2L 8791406 8791430 4 127 8.5 7.0 7.8 0.5 151 chr2L 8791279 intergenic not near genes chr2L 8791354 intergenic not near genes chr2L 8791430 intergenic not near genes chr2L_4_8790001 chr2L_8790001 RAL-307_125b 319 chr2L 8799766 8799827 chr2L 8799916 8799982 30 158 6.0 13.0 9.5 2.9 216 chr2L 8799766 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799982 intergenic not near genes chr2L_30_8795001 chr2L_8795001 RAL-307_125b 320 chr2L 8885868 8885880 chr2L 8886002 8886017 6 136 14.0 4.5 9.2 0.6 149 chr2L 8885868 intergenic not near genes chr2L 8885942 intergenic not near genes chr2L 8886017 intergenic not near genes chr2L_6_8885001 chr2L_8885001 RAL-307_125b 321 chr2L 8963357 8963368 chr2L 8965672 8965683 9 2315 23.5 43.5 33.5 0.3 2326 chr2L 8963357 exon CG32985 + chr2L 8964520 exon CG32985 + chr2L 8965683 exon CG32984 + chr2L_9_8960001 chr2L_8960001 RAL-307_125b 322 chr2L 8976220 8976251 chr2L 8976329 8976393 10 131 0.0 8.0 4.0 2.0 173 chr2L 8976220 intergenic not near genes chr2L 8976306 intergenic not near genes chr2L 8976393 intergenic not near genes chr2L_10_8975001 chr2L_8975001 RAL-307_125b 323 chr2L 9000237 9000308 chr2L 9007797 9007868 roo 21 7559 8.0 11.5 9.8 1.9 7631 chr2L 9000237 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007868 intergenic not near genes chr2L_21_9000001 chr2L_9000001 RAL-307_125b 324 chr2L 9027940 9027976 chr2L 9028074 9028110 9 134 12.0 1.0 6.5 1.2 170 chr2L 9027940 intron,intron CG9582 -,CR44352 - chr2L 9028025 intron,intron CG9582 -,CR44352 - chr2L 9028110 intron,intron CG9582 -,CR44352 - chr2L_9_9025001 chr2L_9025001 RAL-307_125b 325 chr2L 9039982 9040054 chr2L 9040119 9040191 33 134 8.5 14.0 11.2 2.7 209 chr2L 9039982 intergenic not near genes chr2L 9040086 intergenic not near genes chr2L 9040191 intergenic not near genes chr2L_33_9040001 chr2L_9040001 RAL-307_125b 326 chr2L 9044059 9044126 chr2L 9044207 9044283 20 145 3.5 11.5 7.5 2.4 224 chr2L 9044059 intergenic not near genes chr2L 9044171 intergenic not near genes chr2L 9044283 intergenic not near genes chr2L_20_9040001 chr2L_9040001 RAL-307_125b 327 chr2L 9053358 9053430 chr2L 9053643 9053722 17 284 9.0 6.5 7.8 1.9 364 chr2L 9053358 exon CG31708 - chr2L 9053540 intron CG31708 - chr2L 9053722 intron CG31708 - chr2L_17_9050001 chr2L_9050001 RAL-307_125b 328 chr2L 9069634 9069673 chr2L 9069775 9069814 7 141 0.0 1.5 0.8 3.9 180 chr2L 9069634 intron CG31708 - chr2L 9069724 intron CG31708 - chr2L 9069814 intron CG31708 - chr2L_7_9065001 chr2L_9065001 RAL-307_125b 329 chr2L 9084336 9084340 chr2L 16217660 16217660 4 7133322 25.0 34.0 29.5 0.1 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-307_125b 330 chr2L 9109693 9109757 chr2L 9109814 9109817 15 124 9.0 0.5 4.8 2.6 124 chr2L 9109693 intergenic not near genes chr2L 9109755 intergenic not near genes chr2L 9109817 intergenic not near genes chr2L_15_9105001 chr2L_9105001 RAL-307_125b 331 chr2L 9127854 9127865 chr2L 9128424 9128425 4 564 62.0 37.5 49.8 0.1 571 chr2L 9127854 intron CG32982 + chr2L 9128140 intron CG32982 + chr2L 9128425 intron CG32982 + chr2L_4_9125001 chr2L_9125001 RAL-307_125b 332 chr2L 9127840 9127922 chr2L 9128431 9128482 17 570 77.5 38.5 58.0 0.3 642 chr2L 9127840 intron CG32982 + chr2L 9128161 intron CG32982 + chr2L 9128482 intron CG32982 + chr2L_17_9125001 chr2L_9125001 RAL-307_125b 333 chr2L 9217945 9217955 chr2L 9222782 9222790 Doc 4 4836 16.0 0.5 8.2 0.4 4845 chr2L 9217945 intron tai + chr2L 9220368 intron tai + chr2L 9222790 intron tai + chr2L_4_9220001 chr2L_9220001 RAL-307_125b 334 chr2L 9217968 9217998 chr2L 9222780 9222843 Doc 12 4842 7.5 0.5 4.0 2.4 4875 chr2L 9217968 intron tai + chr2L 9220406 intron tai + chr2L 9222843 intron tai + chr2L_12_9220001 chr2L_9220001 RAL-307_125b 335 chr2L 9226171 9226214 chr2L 9226313 9226367 6 149 17.5 0.0 8.8 0.6 196 chr2L 9226171 intron tai + chr2L 9226269 intron tai + chr2L 9226367 intron tai + chr2L_6_9225001 chr2L_9225001 RAL-307_125b 336 chr2L 9226216 9226230 chr2L 9226303 9226306 8 120 11.0 0.0 5.5 1.2 90 chr2L 9226216 intron tai + chr2L 9226261 intron tai + chr2L 9226306 intron tai + chr2L_8_9225001 chr2L_9225001 RAL-307_125b 337 chr2L 9226232 9226237 chr2L 9226298 9226319 10 101 6.5 0.0 3.2 2.4 87 chr2L 9226232 intron tai + chr2L 9226276 intron tai + chr2L 9226319 intron tai + chr2L_10_9225001 chr2L_9225001 RAL-307_125b 338 chr2L 9227199 9227241 chr2L 9227311 9227323 6 117 5.5 6.0 5.8 0.9 124 chr2L 9227199 intron tai + chr2L 9227261 intron tai + chr2L 9227323 intron tai + chr2L_6_9225001 chr2L_9225001 RAL-307_125b 339 chr2L 9259186 9259243 chr2L 9259313 9259355 10 123 6.5 9.0 7.8 1.1 169 chr2L 9259186 intron Ggamma30A + chr2L 9259270 intron Ggamma30A + chr2L 9259355 intron Ggamma30A + chr2L_10_9255001 chr2L_9255001 RAL-307_125b 340 chr2L 9264307 9264327 chr2L 9264457 9264477 15 150 14.0 12.5 13.2 1.1 170 chr2L 9264307 intron Ggamma30A + chr2L 9264392 intron Ggamma30A + chr2L 9264477 intron Ggamma30A + chr2L_15_9260001 chr2L_9260001 RAL-307_125b 341 chr2L 9264329 9264355 chr2L 9264448 9264505 15 147 10.0 9.0 9.5 1.4 176 chr2L 9264329 intron Ggamma30A + chr2L 9264417 intron Ggamma30A + chr2L 9264505 intron Ggamma30A + chr2L_15_9260001 chr2L_9260001 RAL-307_125b 342 chr2L 9270699 9270730 chr2L 9270844 9270845 9 138 19.0 12.5 15.8 0.5 146 chr2L 9270699 intron Ggamma30A + chr2L 9270772 intron Ggamma30A + chr2L 9270845 intron Ggamma30A + chr2L_9_9270001 chr2L_9270001 RAL-307_125b 343 chr2L 9270734 9270744 chr2L 9270832 9270839 5 124 17.0 10.0 13.5 0.3 105 chr2L 9270734 intron Ggamma30A + chr2L 9270786 intron Ggamma30A + chr2L 9270839 intron Ggamma30A + chr2L_5_9270001 chr2L_9270001 RAL-307_125b 344 chr2L 9279936 9280015 chr2L 9280080 9280159 9 144 4.0 6.0 5.0 1.5 223 chr2L 9279936 intron Ggamma30A + chr2L 9280048 intron Ggamma30A + chr2L 9280159 intron Ggamma30A + chr2L_9_9280001 chr2L_9280001 RAL-307_125b 345 chr2L 9283161 9283179 chr2L 9283282 9283306 9 125 20.0 12.0 16.0 0.5 145 chr2L 9283161 intron Ggamma30A + chr2L 9283234 intron Ggamma30A + chr2L 9283306 intron Ggamma30A + chr2L_9_9280001 chr2L_9280001 RAL-307_125b 346 chr2L 9287278 9287350 chr2L 9287425 9287477 42 143 10.5 5.5 8.0 4.7 199 chr2L 9287278 intron Ggamma30A + chr2L 9287378 intron Ggamma30A + chr2L 9287477 intron Ggamma30A + chr2L_42_9285001 chr2L_9285001 RAL-307_125b 347 chr2L 9290728 9290755 chr2L 9290855 9290882 18 126 15.5 0.0 7.8 2.0 154 chr2L 9290728 intron Ggamma30A + chr2L 9290805 intron Ggamma30A + chr2L 9290882 intron Ggamma30A + chr2L_18_9290001 chr2L_9290001 RAL-307_125b 348 chr2L 9297332 9297397 chr2L 9297459 9297524 37 126 10.0 8.0 9.0 3.7 192 chr2L 9297332 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297524 3` UTR Ggamma30A + chr2L_37_9295001 chr2L_9295001 RAL-307_125b 349 chr2L 9300650 9300711 chr2L 9300785 9300842 16 135 9.5 0.0 4.8 2.8 192 chr2L 9300650 3` UTR Ggamma30A + chr2L 9300746 3` UTR Ggamma30A + chr2L 9300842 3` UTR Ggamma30A + chr2L_16_9300001 chr2L_9300001 RAL-307_125b 350 chr2L 9304454 9304513 chr2L 9304583 9304642 36 129 10.0 15.0 12.5 2.7 188 chr2L 9304454 3` UTR CR42844 - chr2L 9304548 3` UTR CR42844 - chr2L 9304642 3` UTR CR42844 - chr2L_36_9300001 chr2L_9300001 RAL-307_125b 351 chr2L 9334972 9335033 chr2L 9335099 9335114 17 126 11.0 0.5 5.8 2.5 142 chr2L 9334972 intron Eaat1 + chr2L 9335043 intron Eaat1 + chr2L 9335114 intron Eaat1 + chr2L_17_9335001 chr2L_9335001 RAL-307_125b 352 chr2L 9337864 9337905 chr2L 9337991 9338032 18 126 11.5 5.5 8.5 1.9 168 chr2L 9337864 intron Eaat1 + chr2L 9337948 intron Eaat1 + chr2L 9338032 intron Eaat1 + chr2L_18_9335001 chr2L_9335001 RAL-307_125b 353 chr2L 9357208 9357281 chr2L 9357339 9357412 19 130 7.0 4.0 5.5 2.9 204 chr2L 9357208 intergenic not near genes chr2L 9357310 intergenic not near genes chr2L 9357412 intergenic not near genes chr2L_19_9355001 chr2L_9355001 RAL-307_125b 354 chr2L 9387201 9387277 chr2L 9387349 9387425 28 148 8.0 4.5 6.2 3.9 224 chr2L 9387201 intron Shawl - chr2L 9387313 intron Shawl - chr2L 9387425 intron,5` UTR Shawl -,Aldh + chr2L_28_9385001 chr2L_9385001 RAL-307_125b 355 chr2L 9391533 9391609 chr2L 9391693 9391769 38 158 8.5 6.5 7.5 4.5 236 chr2L 9391533 intron,3` UTR Shawl -,Aldh + chr2L 9391651 intron Shawl - chr2L 9391769 intron Shawl - chr2L_38_9390001 chr2L_9390001 RAL-307_125b 356 chr2L 9393449 9393527 chr2L 9396466 9396501 jockey 46 3013 9.0 12.0 10.5 4.0 3052 chr2L 9393449 intron Shawl - chr2L 9394975 intron Shawl - chr2L 9396501 intron Shawl - chr2L_46_9390001 chr2L_9390001 RAL-307_125b 357 chr2L 9407860 9407906 chr2L 9407992 9408028 24 128 4.0 10.0 7.0 3.0 168 chr2L 9407860 intron Shawl - chr2L 9407944 intron Shawl - chr2L 9408028 intron Shawl - chr2L_24_9405001 chr2L_9405001 RAL-307_125b 358 chr2L 9454933 9455004 chr2L 9455085 9455104 28 149 11.5 6.5 9.0 2.8 171 chr2L 9454933 intron numb + chr2L 9455018 intron numb + chr2L 9455104 intron numb + chr2L_28_9455001 chr2L_9455001 RAL-307_125b 359 chr2L 9506268 9506300 chr2L 9506451 9506483 13 183 12.0 7.5 9.8 1.2 215 chr2L 9506268 intron CG33298 + chr2L 9506376 intron CG33298 + chr2L 9506483 intron CG33298 + chr2L_13_9505001 chr2L_9505001 RAL-307_125b 360 chr2L 4045514 4045514 chr2L 9558266 9558281 4 5512758 0.0 15.0 7.5 0.5 5512767 chr2L 4045514 intron ed + chr2L 6801898 intron CG17377 - chr2L 9558281 intron jp - chr2L_4_6800001 chr2L_6800001 RAL-307_125b 361 chr2L 9658467 9658542 chr2L 9658905 9658979 23 441 7.5 6.0 6.8 2.9 512 chr2L 9658467 intergenic not near genes chr2L 9658723 intergenic not near genes chr2L 9658979 intergenic not near genes chr2L_23_9655001 chr2L_9655001 RAL-307_125b 362 chr2L 9719742 9719766 chr2L 9719875 9719899 8 133 4.0 4.0 4.0 1.6 157 chr2L 9719742 intron Nckx30C - chr2L 9719820 intron Nckx30C - chr2L 9719899 intron Nckx30C - chr2L_8_9715001 chr2L_9715001 RAL-307_125b 363 chr2L 9730930 9731005 chr2L 9731058 9731133 25 131 9.0 9.0 9.0 2.5 203 chr2L 9730930 intron,3` UTR Nckx30C -,CG13116 + chr2L 9731032 intron Nckx30C - chr2L 9731133 intron Nckx30C - chr2L_25_9730001 chr2L_9730001 RAL-307_125b 364 chr2L 9734248 9734282 chr2L 9734379 9734413 18 130 8.5 15.0 11.8 1.4 165 chr2L 9734248 intron Nckx30C - chr2L 9734330 intron Nckx30C - chr2L 9734413 intron Nckx30C - chr2L_18_9730001 chr2L_9730001 RAL-307_125b 365 chr2L 9738430 9738498 chr2L 9738570 9738644 26 144 3.0 8.0 5.5 4.0 214 chr2L 9738430 intron Nckx30C - chr2L 9738537 intron Nckx30C - chr2L 9738644 intron Nckx30C - chr2L_26_9735001 chr2L_9735001 RAL-307_125b 366 chr2L 9770720 9770763 chr2L 9770875 9770918 29 154 7.0 7.5 7.2 3.5 198 chr2L 9770720 intron ppk18 - chr2L 9770819 intron ppk18 - chr2L 9770918 exon ppk18 - chr2L_29_9770001 chr2L_9770001 RAL-307_125b 367 chr2L 9838699 9838708 chr2L 9838833 9838842 4 134 12.0 0.0 6.0 0.6 143 chr2L 9838699 intron nAChRalpha6 - chr2L 9838770 intron nAChRalpha6 - chr2L 9838842 intron nAChRalpha6 - chr2L_4_9835001 chr2L_9835001 RAL-307_125b 368 chr2L 9871478 9871502 chr2L 9871612 9871636 8 134 11.5 7.0 9.2 0.8 158 chr2L 9871478 intron nAChRalpha6 - chr2L 9871557 intron nAChRalpha6 - chr2L 9871636 intron nAChRalpha6 - chr2L_8_9870001 chr2L_9870001 RAL-307_125b 369 chr2L 9871506 9871533 chr2L 9871610 9871667 19 132 6.0 5.5 5.8 2.8 161 chr2L 9871506 intron nAChRalpha6 - chr2L 9871586 intron nAChRalpha6 - chr2L 9871667 intron nAChRalpha6 - chr2L_19_9870001 chr2L_9870001 RAL-307_125b 370 chr2L 9902357 9902370 chr2L 9902727 9902755 9 380 120.0 0.0 60.0 0.1 398 chr2L 9902357 exon Muc30E - chr2L 9902556 exon Muc30E - chr2L 9902755 exon Muc30E - chr2L_9_9900001 chr2L_9900001 RAL-307_125b 371 chr2L 9973686 9973753 chr2L 9980850 9980922 HMS-Beagle 28 7167 10.5 8.5 9.5 2.7 7236 chr2L 9973686 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980922 intergenic not near genes chr2L_28_9975001 chr2L_9975001 RAL-307_125b 372 chr2L 9986321 9986372 chr2L 9986448 9986477 18 126 10.0 9.5 9.8 1.7 156 chr2L 9986321 intron bib + chr2L 9986399 intron bib + chr2L 9986477 intron bib + chr2L_18_9985001 chr2L_9985001 RAL-307_125b 373 chr2L 10095586 10095660 chr2L 10095716 10095790 40 127 11.0 12.0 11.5 3.2 204 chr2L 10095586 intron CG44153 - chr2L 10095688 intron CG44153 - chr2L 10095790 intron CG44153 - chr2L_40_10095001 chr2L_10095001 RAL-307_125b 374 chr2L 10105271 10105283 chr2L 10105385 10105403 4 120 10.0 16.0 13.0 0.3 132 chr2L 10105271 intron,intron CG44153 -,CG34109 + chr2L 10105337 intron,intron CG44153 -,CG34109 + chr2L 10105403 intron,intron CG44153 -,CG34109 + chr2L_4_10105001 chr2L_10105001 RAL-307_125b 375 chr2L 10105294 10105312 chr2L 10105382 10105399 5 108 7.5 16.0 11.8 0.4 105 chr2L 10105294 intron,intron CG44153 -,CG34109 + chr2L 10105346 intron,intron CG44153 -,CG34109 + chr2L 10105399 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-307_125b 376 chr2L 10120949 10120983 chr2L 10121081 10121115 11 128 8.5 6.5 7.5 1.3 166 chr2L 10120949 intron,intron CG44153 -,CG34109 + chr2L 10121032 intron,intron CG44153 -,CG34109 + chr2L 10121115 intron,intron CG44153 -,CG34109 + chr2L_11_10120001 chr2L_10120001 RAL-307_125b 377 chr2L 10153176 10153189 chr2L 10153296 10153318 7 126 10.0 8.0 9.0 0.7 142 chr2L 10153176 intron,exon CG44153 -,CG4839 + chr2L 10153247 intron,intron CG44153 -,CG4839 + chr2L 10153318 intron,intron CG44153 -,CG4839 + chr2L_7_10150001 chr2L_10150001 RAL-307_125b 378 chr2L 10153194 10153226 chr2L 10153295 10153355 14 122 5.0 8.0 6.5 1.9 161 chr2L 10153194 intron,exon CG44153 -,CG4839 + chr2L 10153274 intron,intron CG44153 -,CG4839 + chr2L 10153355 intron,exon CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 RAL-307_125b 379 chr2L 10156280 10156301 chr2L 10163800 10163820 blood 6 7520 22.0 12.0 17.0 0.3 7540 chr2L 10156280 intron,3` UTR CG44153 -,CG4839 + chr2L 10160050 intron CG44153 - chr2L 10163820 intron CG44153 - chr2L_6_10160001 chr2L_10160001 RAL-307_125b 380 chr2L 10156304 10156346 chr2L 10163797 10163845 blood 18 7513 12.0 11.0 11.5 1.4 7541 chr2L 10156304 intron,3` UTR CG44153 -,CG4839 + chr2L 10160074 intron CG44153 - chr2L 10163845 intron CG44153 - chr2L_18_10160001 chr2L_10160001 RAL-307_125b 381 chr2L 10175601 10175621 chr2L 10175738 10175753 7 136 13.5 12.5 13.0 0.5 152 chr2L 10175601 intron CG44153 - chr2L 10175677 intron CG44153 - chr2L 10175753 intron CG44153 - chr2L_7_10175001 chr2L_10175001 RAL-307_125b 382 chr2L 10176516 10176570 chr2L 10176834 10176903 29 329 5.5 12.0 8.8 3.0 387 chr2L 10176516 intron CG44153 - chr2L 10176710 intron CG44153 - chr2L 10176903 intron CG44153 - chr2L_29_10175001 chr2L_10175001 RAL-307_125b 383 chr2L 10177331 10177393 chr2L 10177457 10177523 13 127 5.5 0.0 2.8 3.4 192 chr2L 10177331 intron CG44153 - chr2L 10177427 intron CG44153 - chr2L 10177523 intron CG44153 - chr2L_13_10175001 chr2L_10175001 RAL-307_125b 384 chr2L 10209799 10209820 chr2L 10209926 10209947 12 127 21.0 6.5 13.8 0.8 148 chr2L 10209799 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209873 3` UTR CG5727 - chr2L 10209947 3` UTR CG5727 - chr2L_12_10205001 chr2L_10205001 RAL-307_125b 385 chr2L 10258383 10258438 chr2L 10258516 10258573 25 133 7.0 9.5 8.2 2.7 190 chr2L 10258383 exon Pten - chr2L 10258478 intron Pten - chr2L 10258573 exon Pten - chr2L_25_10255001 chr2L_10255001 RAL-307_125b 386 chr2L 10294630 10294690 chr2L 10294766 10294826 15 136 15.5 7.5 11.5 1.2 196 chr2L 10294630 intron Hand - chr2L 10294728 intron Hand - chr2L 10294826 intron Hand - chr2L_15_10290001 chr2L_10290001 RAL-307_125b 387 chr2L 10385578 10385643 chr2L 10385708 10385773 37 127 15.5 14.5 15.0 2.3 195 chr2L 10385578 exon cdc2 - chr2L 10385676 intron cdc2 - chr2L 10385773 intron cdc2 - chr2L_37_10385001 chr2L_10385001 RAL-307_125b 388 chr2L 10458178 10458212 chr2L 10458324 10458358 13 145 0.0 6.0 3.0 3.2 180 chr2L 10458178 intron LM408 + chr2L 10458268 intron LM408 + chr2L 10458358 intron LM408 + chr2L_13_10455001 chr2L_10455001 RAL-307_125b 389 chr2L 10490232 10490304 chr2L 10490359 10490426 38 124 11.5 13.5 12.5 2.8 194 chr2L 10490232 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490329 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490426 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_38_10490001 chr2L_10490001 RAL-307_125b 390 chr2L 10495299 10495420 chr2L 10495426 10495555 14 128 25.0 24.0 24.5 0.5 256 chr2L 10495299 intron Myo31DF - chr2L 10495427 intron Myo31DF - chr2L 10495555 intron Myo31DF - chr2L_14_10495001 chr2L_10495001 RAL-307_125b 391 chr2L 10515311 10515387 chr2L 10515454 10515530 38 140 11.5 8.5 10.0 3.5 219 chr2L 10515311 intron,intron CG45083 -,Fatp - chr2L 10515420 intron,intron CG45083 -,Fatp - chr2L 10515530 intron,intron CG45083 -,Fatp - chr2L_38_10515001 chr2L_10515001 RAL-307_125b 392 chr2L 10531563 10531643 chr2L 10531705 10531785 33 141 0.0 10.0 5.0 5.5 222 chr2L 10531563 3` UTR Lip4 + chr2L 10531674 3` UTR Lip4 + chr2L 10531785 intergenic Lip4 +,CG18301 + chr2L_33_10530001 chr2L_10530001 RAL-307_125b 393 chr2L 10558747 10558760 chr2L 10558873 10558885 6 126 22.0 20.0 21.0 0.3 138 chr2L 10558747 intron Trim9 + chr2L 10558816 intron Trim9 + chr2L 10558885 intron Trim9 + chr2L_6_10555001 chr2L_10555001 RAL-307_125b 394 chr2L 10558761 10558821 chr2L 10558866 10558901 24 113 14.5 18.0 16.2 1.4 140 chr2L 10558761 intron Trim9 + chr2L 10558831 intron Trim9 + chr2L 10558901 intron Trim9 + chr2L_24_10555001 chr2L_10555001 RAL-307_125b 395 chr2L 10563862 10563945 chr2L 10564005 10564052 18 138 4.5 11.0 7.8 2.0 190 chr2L 10563862 intron Trim9 + chr2L 10563957 intron Trim9 + chr2L 10564052 intron Trim9 + chr2L_18_10560001 chr2L_10560001 RAL-307_125b 396 chr2L 10571428 10571496 chr2L 10571563 10571631 27 135 14.5 11.5 13.0 1.9 203 chr2L 10571428 intron Trim9 + chr2L 10571530 intron Trim9 + chr2L 10571631 intron Trim9 + chr2L_27_10570001 chr2L_10570001 RAL-307_125b 397 chr2L 10580749 10580817 chr2L 10580879 10580933 39 128 9.0 7.5 8.2 4.2 184 chr2L 10580749 intron Trim9 + chr2L 10580841 intron Trim9 + chr2L 10580933 intron Trim9 + chr2L_39_10580001 chr2L_10580001 RAL-307_125b 398 chr2L 10582488 10582506 chr2L 10582627 10582647 9 140 22.0 6.0 14.0 0.6 159 chr2L 10582488 intron Trim9 + chr2L 10582568 intron Trim9 + chr2L 10582647 intron Trim9 + chr2L_9_10580001 chr2L_10580001 RAL-307_125b 399 chr2L 10582507 10582561 chr2L 10582623 10582672 14 130 9.5 5.0 7.2 1.7 165 chr2L 10582507 intron Trim9 + chr2L 10582590 intron Trim9 + chr2L 10582672 intron Trim9 + chr2L_14_10580001 chr2L_10580001 RAL-307_125b 400 chr2L 10592818 10592834 chr2L 10600529 10600546 opus 9 7711 10.5 18.5 14.5 0.6 7728 chr2L 10592818 intron Trim9 + chr2L 10596682 intron Trim9 + chr2L 10600546 intron Trim9 + chr2L_9_10595001 chr2L_10595001 RAL-307_125b 401 chr2L 10592840 10592868 chr2L 10600527 10600580 opus 18 7709 6.5 18.5 12.5 1.3 7740 chr2L 10592840 intron Trim9 + chr2L 10596710 intron Trim9 + chr2L 10600580 intron Trim9 + chr2L_18_10595001 chr2L_10595001 RAL-307_125b 402 chr2L 10604165 10604221 chr2L 10604279 10604353 29 129 7.5 2.0 4.8 5.0 188 chr2L 10604165 intron Trim9 + chr2L 10604259 intron Trim9 + chr2L 10604353 intron Trim9 + chr2L_29_10600001 chr2L_10600001 RAL-307_125b 403 chr2L 10634713 10634788 chr2L 10634843 10634916 32 129 10.5 10.5 10.5 2.8 203 chr2L 10634713 intron CG7329 - chr2L 10634814 intron CG7329 - chr2L 10634916 intron CG7329 - chr2L_32_10630001 chr2L_10630001 RAL-307_125b 404 chr2L 10688494 10688565 chr2L 10688620 10688620 13 121 7.5 5.5 6.5 1.7 126 chr2L 10688494 intergenic CG7294 - chr2L 10688557 intergenic CG7294 - chr2L 10688620 intergenic CG7294 - chr2L_13_10685001 chr2L_10685001 RAL-307_125b 405 chr2L 10696574 10696620 chr2L 10696693 10696760 9 131 5.0 6.5 5.8 1.3 186 chr2L 10696574 exon,5` UTR CG7300 -,CR44181 + chr2L 10696667 exon,5` UTR CG7300 -,CR44181 + chr2L 10696760 exon,5` UTR CG7300 -,CR44181 + chr2L_9_10695001 chr2L_10695001 RAL-307_125b 406 chr2L 10701768 10701844 chr2L 10701904 10701980 27 136 8.5 4.5 6.5 3.6 212 chr2L 10701768 intergenic Lip2 -,Lip1 - chr2L 10701874 intergenic Lip2 -,Lip1 - chr2L 10701980 3` UTR Lip2 - chr2L_27_10700001 chr2L_10700001 RAL-307_125b 407 chr2L 10746463 10746505 chr2L 10746714 10746768 18 260 2.5 8.0 5.2 2.9 305 chr2L 10746463 intron CG17124 - chr2L 10746616 intron CG17124 - chr2L 10746768 intron CG17124 - chr2L_18_10745001 chr2L_10745001 RAL-307_125b 408 chr2L 10755529 10755593 chr2L 10755688 10755752 33 158 6.5 9.5 8.0 3.7 223 chr2L 10755529 intron CG17124 - chr2L 10755640 intron CG17124 - chr2L 10755752 intron CG17124 - chr2L_33_10755001 chr2L_10755001 RAL-307_125b 409 chr2L 10763243 10763307 chr2L 10763391 10763452 9 147 10.5 8.0 9.2 0.9 209 chr2L 10763243 intron CG6495 + chr2L 10763348 intron CG6495 + chr2L 10763452 intron CG6495 + chr2L_9_10760001 chr2L_10760001 RAL-307_125b 410 chr2L 10787932 10788030 chr2L 10788075 10788156 12 133 2.0 7.0 4.5 2.2 224 chr2L 10787932 intron CG31869 - chr2L 10788044 intron CG31869 - chr2L 10788156 intron CG31869 - chr2L_12_10785001 chr2L_10785001 RAL-307_125b 411 chr2L 10812014 10812068 chr2L 10812158 10812212 19 142 7.5 10.0 8.8 1.9 198 chr2L 10812014 intron Nos - chr2L 10812113 intron Nos - chr2L 10812212 intron Nos - chr2L_19_10810001 chr2L_10810001 RAL-307_125b 412 chr2L 10836709 10836779 chr2L 10836838 10836907 28 127 10.5 7.5 9.0 2.8 198 chr2L 10836709 intron Nos - chr2L 10836808 intron Nos - chr2L 10836907 intron Nos - chr2L_28_10835001 chr2L_10835001 RAL-307_125b 413 chr2L 10862833 10862864 chr2L 10864463 10864518 Rt1c 11 1646 8.0 5.5 6.8 1.4 1685 chr2L 10862833 3` UTR CR43807 - chr2L 10863676 intron CR43807 - chr2L 10864518 3` UTR CR43807 - chr2L_11_10860001 chr2L_10860001 RAL-307_125b 414 chr2L 10876526 10876555 chr2L 10883632 10883660 297 6 7102 6.5 12.0 9.2 0.6 7134 chr2L 10876526 intergenic not near genes chr2L 10880093 intergenic not near genes chr2L 10883660 intergenic not near genes chr2L_6_10880001 chr2L_10880001 RAL-307_125b 415 chr2L 10928531 10928605 chr2L 10928683 10928757 31 148 11.0 7.0 9.0 3.1 226 chr2L 10928531 intron dpr2 - chr2L 10928644 intron dpr2 - chr2L 10928757 intron dpr2 - chr2L_31_10925001 chr2L_10925001 RAL-307_125b 416 chr2L 10944413 10944470 chr2L 10944542 10944603 15 131 0.0 9.5 4.8 2.6 190 chr2L 10944413 intron dpr2 - chr2L 10944508 intron dpr2 - chr2L 10944603 intron dpr2 - chr2L_15_10940001 chr2L_10940001 RAL-307_125b 417 chr2L 10946915 10946971 chr2L 10956180 10956224 roo 21 9254 6.5 6.5 6.5 2.8 9309 chr2L 10946915 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956224 intron dpr2 - chr2L_21_10950001 chr2L_10950001 RAL-307_125b 418 chr2L 11016655 11016684 chr2L 11016808 11016837 7 153 14.5 3.5 9.0 0.7 182 chr2L 11016655 intron Samuel - chr2L 11016746 intron Samuel - chr2L 11016837 intron Samuel - chr2L_7_11015001 chr2L_11015001 RAL-307_125b 419 chr2L 11073004 11073063 chr2L 11073132 11073191 18 128 9.5 7.0 8.2 2.0 187 chr2L 11073004 intergenic not near genes chr2L 11073098 intergenic not near genes chr2L 11073191 intergenic not near genes chr2L_18_11070001 chr2L_11070001 RAL-307_125b 420 chr2L 11183739 11183810 chr2L 11183885 11183956 37 145 12.5 10.5 11.5 3.0 217 chr2L 11183739 intron Ca-beta - chr2L 11183848 intron Ca-beta - chr2L 11183956 intron Ca-beta - chr2L_37_11180001 chr2L_11180001 RAL-307_125b 421 chr2L 11193524 11193589 chr2L 11193657 11193733 9 136 0.5 11.0 5.8 1.3 209 chr2L 11193524 intron Ca-beta - chr2L 11193628 intron Ca-beta - chr2L 11193733 intron Ca-beta - chr2L_9_11190001 chr2L_11190001 RAL-307_125b 422 chr2L 11315226 11315237 chr2L 11317680 11317691 G2 6 2454 16.0 13.5 14.8 0.4 2465 chr2L 11315226 intergenic not near genes chr2L 11316458 intergenic not near genes chr2L 11317691 intergenic not near genes chr2L_6_11315001 chr2L_11315001 RAL-307_125b 423 chr2L 11315243 11315267 chr2L 11317677 11317721 G2 10 2450 8.0 13.0 10.5 0.9 2478 chr2L 11315243 intergenic not near genes chr2L 11316482 intergenic not near genes chr2L 11317721 intergenic not near genes chr2L_10_11315001 chr2L_11315001 RAL-307_125b 424 chr2L 11339687 11339888 chr2L 11339814 11339991 17 119 27.0 9.5 18.2 0.9 304 chr2L 11339687 intergenic not near genes chr2L 11339839 intergenic not near genes chr2L 11339991 intergenic not near genes chr2L_17_11335001 chr2L_11335001 RAL-307_125b 425 chr2L 11379946 11379952 chr2L 11380078 11380084 4 132 9.5 0.0 4.8 0.7 138 chr2L 11379946 intergenic not near genes chr2L 11380015 intergenic not near genes chr2L 11380084 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-307_125b 426 chr2L 11380586 11380635 chr2L 11380687 11380762 13 119 4.5 5.5 5.0 2.2 176 chr2L 11380586 intergenic not near genes chr2L 11380674 intergenic not near genes chr2L 11380762 intergenic not near genes chr2L_13_11380001 chr2L_11380001 RAL-307_125b 427 chr2L 11390676 11390751 chr2L 11390829 11390904 27 151 10.0 9.0 9.5 2.6 228 chr2L 11390676 3` UTR CR43681 - chr2L 11390790 3` UTR CR43681 - chr2L 11390904 3` UTR CR43681 - chr2L_27_11390001 chr2L_11390001 RAL-307_125b 428 chr2L 11394974 11395022 chr2L 11395101 11395104 6 116 18.0 1.5 9.8 0.6 130 chr2L 11394974 intergenic not near genes chr2L 11395039 intergenic not near genes chr2L 11395104 intergenic not near genes chr2L_6_11395001 chr2L_11395001 RAL-307_125b 429 chr2L 11413241 11413320 chr2L 11413415 11413494 38 171 10.5 8.5 9.5 3.6 253 chr2L 11413241 intergenic not near genes chr2L 11413368 intergenic not near genes chr2L 11413494 intergenic not near genes chr2L_38_11410001 chr2L_11410001 RAL-307_125b 430 chr2L 11418618 11418634 chr2L 11418735 11418763 7 124 14.5 9.0 11.8 0.5 145 chr2L 11418618 intergenic not near genes chr2L 11418690 intergenic not near genes chr2L 11418763 intergenic not near genes chr2L_7_11415001 chr2L_11415001 RAL-307_125b 431 chr2L 11418635 11418688 chr2L 11418734 11418805 18 122 10.0 8.5 9.2 1.8 170 chr2L 11418635 intergenic not near genes chr2L 11418720 intergenic not near genes chr2L 11418805 intergenic not near genes chr2L_18_11415001 chr2L_11415001 RAL-307_125b 432 chr2L 11450075 11450146 chr2L 11450211 11450278 14 135 0.5 7.0 3.8 2.9 203 chr2L 11450075 intergenic not near genes chr2L 11450176 intergenic not near genes chr2L 11450278 intergenic not near genes chr2L_14_11450001 chr2L_11450001 RAL-307_125b 433 chr2L 11491088 11491142 chr2L 11491219 11491241 18 123 6.5 8.0 7.2 2.2 153 chr2L 11491088 intergenic not near genes chr2L 11491164 intergenic not near genes chr2L 11491241 intergenic not near genes chr2L_18_11490001 chr2L_11490001 RAL-307_125b 434 chr2L 11492980 11492989 chr2L 11493168 11493179 7 190 0.0 3.0 1.5 2.8 199 chr2L 11492980 intergenic not near genes chr2L 11493080 intergenic not near genes chr2L 11493179 intergenic not near genes chr2L_7_11490001 chr2L_11490001 RAL-307_125b 435 chr2L 11536671 11536678 chr2L 11536802 11536809 6 130 13.0 0.0 6.5 0.8 138 chr2L 11536671 exon CG43438 + chr2L 11536740 3` UTR CG43438 + chr2L 11536809 3` UTR CG43438 + chr2L_6_11535001 chr2L_11535001 RAL-307_125b 436 chr2L 11536682 11536834 chr2L 11536797 11536969 8 116 0.0 1.0 0.5 5.3 287 chr2L 11536682 exon CG43438 + chr2L 11536826 3` UTR CG43438 + chr2L 11536969 intergenic CG43438 + chr2L_8_11535001 chr2L_11535001 RAL-307_125b 437 chr2L 11537711 11537776 chr2L 11537878 11537943 18 166 6.0 8.5 7.2 2.2 232 chr2L 11537711 intergenic not near genes chr2L 11537827 intergenic not near genes chr2L 11537943 intergenic not near genes chr2L_18_11535001 chr2L_11535001 RAL-307_125b 438 chr2L 11540547 11540605 chr2L 11547999 11548057 Tabor 26 7452 9.0 10.0 9.5 2.5 7510 chr2L 11540547 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548057 intergenic not near genes chr2L_26_11540001 chr2L_11540001 RAL-307_125b 439 chr2L 11555363 11555427 chr2L 11555532 11555596 17 169 7.5 2.0 4.8 2.9 233 chr2L 11555363 intergenic not near genes chr2L 11555480 intergenic not near genes chr2L 11555596 intergenic not near genes chr2L_17_11555001 chr2L_11555001 RAL-307_125b 440 chr2L 11563597 11563649 chr2L 11568851 11568903 copia 17 5252 9.5 14.0 11.8 1.3 5306 chr2L 11563597 intergenic not near genes chr2L 11566250 intergenic not near genes chr2L 11568903 intergenic not near genes chr2L_17_11565001 chr2L_11565001 RAL-307_125b 441 chr2L 11584640 11584663 chr2L 11584754 11584788 7 119 10.0 4.5 7.2 0.9 148 chr2L 11584640 intron kek2 + chr2L 11584714 intron kek2 + chr2L 11584788 intron kek2 + chr2L_7_11580001 chr2L_11580001 RAL-307_125b 442 chr2L 11614010 11614077 chr2L 11615555 11615620 hopper2 12 1532 3.0 6.5 4.8 2.1 1610 chr2L 11614010 intron kek2 + chr2L 11614815 intron kek2 + chr2L 11615620 intron kek2 + chr2L_12_11610001 chr2L_11610001 RAL-307_125b 443 chr2L 11614080 11614085 chr2L 11615552 11615592 hopper2 6 1518 2.0 6.5 4.2 1.2 1512 chr2L 11614080 intron kek2 + chr2L 11614836 intron kek2 + chr2L 11615592 intron kek2 + chr2L_6_11610001 chr2L_11610001 RAL-307_125b 444 chr2L 11618512 11618579 chr2L 11618653 11618692 24 139 5.0 14.0 9.5 2.3 180 chr2L 11618512 intron kek2 + chr2L 11618602 intron kek2 + chr2L 11618692 intron kek2 + chr2L_24_11615001 chr2L_11615001 RAL-307_125b 445 chr2L 11633121 11633196 chr2L 11633273 11633341 21 143 3.5 9.0 6.2 2.9 220 chr2L 11633121 intergenic not near genes chr2L 11633231 intergenic not near genes chr2L 11633341 intergenic not near genes chr2L_21_11630001 chr2L_11630001 RAL-307_125b 446 chr2L 11672088 11672164 chr2L 11672245 11672321 31 157 3.0 3.5 3.2 7.4 233 chr2L 11672088 intergenic not near genes chr2L 11672204 intergenic not near genes chr2L 11672321 intergenic not near genes chr2L_31_11670001 chr2L_11670001 RAL-307_125b 447 chr2L 11710113 11710145 chr2L 11710239 11710249 5 118 11.0 0.0 5.5 0.8 136 chr2L 11710113 intergenic not near genes chr2L 11710181 intergenic not near genes chr2L 11710249 intergenic not near genes chr2L_5_11710001 chr2L_11710001 RAL-307_125b 448 chr2L 11713472 11713489 chr2L 11720989 11721007 blood 7 7516 20.5 9.5 15.0 0.4 7535 chr2L 11713472 intergenic not near genes chr2L 11717240 intergenic not near genes chr2L 11721007 intergenic CR44143 + chr2L_7_11715001 chr2L_11715001 RAL-307_125b 449 chr2L 11713491 11713532 chr2L 11720984 11721034 blood 20 7511 9.5 8.5 9.0 2.0 7543 chr2L 11713491 intergenic not near genes chr2L 11717262 intergenic not near genes chr2L 11721034 intergenic CR44143 + chr2L_20_11715001 chr2L_11715001 RAL-307_125b 450 chr2L 11750277 11750340 chr2L 11750613 11750676 17 332 5.5 7.0 6.2 2.4 399 chr2L 11750277 intergenic not near genes chr2L 11750476 intergenic not near genes chr2L 11750676 intergenic not near genes chr2L_17_11750001 chr2L_11750001 RAL-307_125b 451 chr2L 11846966 11847038 chr2L 11847329 11847376 32 359 10.0 11.5 10.8 2.7 410 chr2L 11846966 intron Pde1c - chr2L 11847171 intron Pde1c - chr2L 11847376 intron,exon Pde1c -,Mal-B1 + chr2L_32_11845001 chr2L_11845001 RAL-307_125b 452 chr2L 11931918 11931994 chr2L 11932048 11932113 33 124 11.0 8.5 9.8 3.1 195 chr2L 11931918 intergenic not near genes chr2L 11932016 intergenic not near genes chr2L 11932113 intergenic not near genes chr2L_33_11930001 chr2L_11930001 RAL-307_125b 453 chr2L 12026754 12026776 chr2L 12026985 12027007 7 231 3.5 0.0 1.8 2.5 253 chr2L 12026754 intergenic not near genes chr2L 12026880 intergenic not near genes chr2L 12027007 intergenic dmGlut + chr2L_7_12025001 chr2L_12025001 RAL-307_125b 454 chr2L 12031341 12031413 chr2L 12031472 12031544 31 130 8.5 0.5 4.5 5.6 203 chr2L 12031341 intron dmGlut + chr2L 12031442 intron dmGlut + chr2L 12031544 intron dmGlut + chr2L_31_12030001 chr2L_12030001 RAL-307_125b 455 chr2L 12067286 12067351 chr2L 12074388 12074453 297 31 7100 12.5 15.5 14.0 2.1 7167 chr2L 12067286 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074453 intergenic not near genes chr2L_31_12070001 chr2L_12070001 RAL-307_125b 456 chr2L 12132687 12132742 chr2L 12132823 12132858 26 133 2.5 13.5 8.0 2.9 171 chr2L 12132687 intron rho-6 - chr2L 12132772 intron rho-6 - chr2L 12132858 intron rho-6 - chr2L_26_12130001 chr2L_12130001 RAL-307_125b 457 chr2L 12153886 12153962 chr2L 12154013 12154082 28 123 5.5 7.0 6.2 3.9 196 chr2L 12153886 exon CG31760 + chr2L 12153984 intron CG31760 + chr2L 12154082 intron CG31760 + chr2L_28_12150001 chr2L_12150001 RAL-307_125b 458 chr2L 12179763 12179842 chr2L 12180529 12180584 41 758 3.0 7.5 5.2 6.6 821 chr2L 12179763 intron aret + chr2L 12180174 intron aret + chr2L 12180584 intron aret + chr2L_41_12180001 chr2L_12180001 RAL-307_125b 459 chr2L 12209996 12210046 chr2L 12210135 12210165 27 137 11.0 7.5 9.2 2.6 169 chr2L 12209996 intron,3` UTR aret +,CG31759 + chr2L 12210080 intron aret + chr2L 12210165 intron aret + chr2L_27_12210001 chr2L_12210001 RAL-307_125b 460 chr2L 12250650 12250712 chr2L 12250777 12250839 25 124 8.5 11.5 10.0 2.3 189 chr2L 12250650 intron aret + chr2L 12250744 intron aret + chr2L 12250839 intron aret + chr2L_25_12250001 chr2L_12250001 RAL-307_125b 461 chr2L 12253985 12254006 chr2L 12254122 12254147 7 141 10.0 0.0 5.0 1.2 162 chr2L 12253985 intron aret + chr2L 12254066 intron aret + chr2L 12254147 intron aret + chr2L_7_12250001 chr2L_12250001 RAL-307_125b 462 chr2L 12263899 12263915 chr2L 12264031 12264047 7 131 14.5 6.5 10.5 0.6 148 chr2L 12263899 intron aret + chr2L 12263973 intron aret + chr2L 12264047 intron aret + chr2L_7_12260001 chr2L_12260001 RAL-307_125b 463 chr2L 12263916 12263969 chr2L 12264027 12264091 15 129 6.0 5.5 5.8 2.2 175 chr2L 12263916 intron aret + chr2L 12264004 intron aret + chr2L 12264091 intron aret + chr2L_15_12260001 chr2L_12260001 RAL-307_125b 464 chr2L 12269361 12269397 chr2L 12269489 12269525 18 127 16.5 5.0 10.8 1.5 164 chr2L 12269361 intron aret + chr2L 12269443 intron aret + chr2L 12269525 intron aret + chr2L_18_12265001 chr2L_12265001 RAL-307_125b 465 chr2L 12272394 12272465 chr2L 12272531 12272594 30 133 8.0 11.0 9.5 2.9 200 chr2L 12272394 intron aret + chr2L 12272494 intron aret + chr2L 12272594 intron aret + chr2L_30_12270001 chr2L_12270001 RAL-307_125b 466 chr2L 12275148 12275172 chr2L 12275285 12275309 13 137 9.5 5.0 7.2 1.6 161 chr2L 12275148 intron aret + chr2L 12275228 intron aret + chr2L 12275309 intron aret + chr2L_13_12275001 chr2L_12275001 RAL-307_125b 467 chr2L 12305364 12305403 chr2L 12305502 12305541 8 138 11.0 5.5 8.2 0.9 177 chr2L 12305364 intron aret + chr2L 12305452 intron aret + chr2L 12305541 intron aret + chr2L_8_12305001 chr2L_12305001 RAL-307_125b 468 chr2L 12305404 12305435 chr2L 12305501 12305573 14 133 6.0 5.5 5.8 2.1 169 chr2L 12305404 intron aret + chr2L 12305488 intron aret + chr2L 12305573 intron aret + chr2L_14_12305001 chr2L_12305001 RAL-307_125b 469 chr2L 12394937 12394994 chr2L 12395099 12395156 28 160 9.5 5.0 7.2 3.4 219 chr2L 12394937 intron bru-2 + chr2L 12395046 intron bru-2 + chr2L 12395156 intron bru-2 + chr2L_28_12395001 chr2L_12395001 RAL-307_125b 470 chr2L 12466199 12466241 chr2L 12466334 12466377 19 136 5.5 0.5 3.0 4.8 178 chr2L 12466199 intron bun - chr2L 12466288 intron bun - chr2L 12466377 intron bun - chr2L_19_12465001 chr2L_12465001 RAL-307_125b 471 chr2L 12487857 12487913 chr2L 12487971 12488029 30 125 4.5 6.5 5.5 4.6 172 chr2L 12487857 intron bun - chr2L 12487943 intron bun - chr2L 12488029 intron bun - chr2L_30_12485001 chr2L_12485001 RAL-307_125b 472 chr2L 12492645 12492717 chr2L 12492776 12492850 11 131 1.0 0.5 0.8 6.1 205 chr2L 12492645 intron bun - chr2L 12492748 intron bun - chr2L 12492850 intron bun - chr2L_11_12490001 chr2L_12490001 RAL-307_125b 473 chr2L 12495653 12495661 chr2L 12495785 12495787 7 131 16.0 10.5 13.2 0.5 134 chr2L 12495653 intron bun - chr2L 12495720 intron bun - chr2L 12495787 intron bun - chr2L_7_12495001 chr2L_12495001 RAL-307_125b 474 chr2L 12495663 12495732 chr2L 12495784 12495864 40 127 8.5 10.0 9.2 3.9 201 chr2L 12495663 intron bun - chr2L 12495764 intron bun - chr2L 12495864 intron bun - chr2L_40_12495001 chr2L_12495001 RAL-307_125b 475 chr2L 12529200 12529434 chr2L 12529383 12529521 28 157 0.0 0.0 0.0 28.0 321 chr2L 12529200 intron bun - chr2L 12529360 intron bun - chr2L 12529521 intron bun - chr2L_28_12525001 chr2L_12525001 RAL-307_125b 476 chr2L 12558277 12558352 chr2L 12565451 12565495 HMS-Beagle 41 7174 5.0 8.5 6.8 5.3 7218 chr2L 12558277 intergenic not near genes chr2L 12561886 intergenic not near genes chr2L 12565495 intergenic not near genes chr2L_41_12560001 chr2L_12560001 RAL-307_125b 477 chr2L 12619853 12619903 chr2L 12619979 12619982 11 121 13.0 10.5 11.8 0.9 129 chr2L 12619853 intron,intron nub +,Ref2 - chr2L 12619918 intron,intron nub +,Ref2 - chr2L 12619982 intron,intron nub +,Ref2 - chr2L_11_12615001 chr2L_12615001 RAL-307_125b 478 chr2L 12638733 12638802 chr2L 12638886 12638955 36 152 9.5 9.0 9.2 3.5 222 chr2L 12638733 intron Ref2 - chr2L 12638844 intron Ref2 - chr2L 12638955 intron Ref2 - chr2L_36_12635001 chr2L_12635001 RAL-307_125b 479 chr2L 12699822 12699868 chr2L 12699929 12699934 4 94 4.0 5.0 4.5 0.7 112 chr2L 12699822 exon CG17036 - chr2L 12699878 exon CG17036 - chr2L 12699934 exon CG17036 - chr2L_4_12695001 chr2L_12695001 RAL-307_125b 480 chr2L 12731013 12731078 chr2L 12735823 12735895 F-element 31 4815 12.0 10.5 11.2 2.5 4882 chr2L 12731013 intron MRP + chr2L 12733454 intron MRP + chr2L 12735895 intron MRP + chr2L_31_12730001 chr2L_12730001 RAL-307_125b 481 chr2L 12739130 12739196 chr2L 12743961 12744026 Doc 23 4829 9.0 10.5 9.8 2.1 4896 chr2L 12739130 exon MRP + chr2L 12741578 intron MRP + chr2L 12744026 exon MRP + chr2L_23_12740001 chr2L_12740001 RAL-307_125b 482 chr2L 12751280 12751332 chr2L 12751398 12751426 19 126 4.0 5.5 4.8 3.3 146 chr2L 12751280 intergenic not near genes chr2L 12751353 intergenic not near genes chr2L 12751426 intergenic not near genes chr2L_19_12750001 chr2L_12750001 RAL-307_125b 483 chr2L 12760196 12760256 chr2L 12760342 12760404 17 146 9.0 8.0 8.5 1.8 208 chr2L 12760196 intergenic CG15483 - chr2L 12760300 intergenic CG15483 - chr2L 12760404 3` UTR CG15483 - chr2L_17_12760001 chr2L_12760001 RAL-307_125b 484 chr2L 12763784 12763869 chr2L 12764044 12764131 BS 21 261 0.0 0.5 0.2 17.5 347 chr2L 12763784 intergenic not near genes chr2L 12763958 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_21_12760001 chr2L_12760001 RAL-307_125b 485 chr2L 12766712 12766779 chr2L 12766840 12766906 27 126 14.0 6.0 10.0 2.5 194 chr2L 12766712 intergenic not near genes chr2L 12766809 intergenic not near genes chr2L 12766906 intergenic not near genes chr2L_27_12765001 chr2L_12765001 RAL-307_125b 486 chr2L 12781763 12781810 chr2L 12789256 12789303 Quasimodo 17 7492 9.0 13.5 11.2 1.4 7540 chr2L 12781763 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789303 intergenic not near genes chr2L_17_12785001 chr2L_12785001 RAL-307_125b 487 chr2L 12791575 12791584 chr2L 12795300 12795309 F-element 7 3725 21.5 15.0 18.2 0.4 3734 chr2L 12791575 intergenic not near genes chr2L 12793442 intergenic not near genes chr2L 12795309 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-307_125b 488 chr2L 12791587 12791625 chr2L 12795284 12795350 F-element 26 3718 11.5 10.5 11.0 2.2 3763 chr2L 12791587 intergenic not near genes chr2L 12793468 intergenic not near genes chr2L 12795350 intergenic not near genes chr2L_26_12790001 chr2L_12790001 RAL-307_125b 489 chr2L 12807400 12807467 chr2L 12807520 12807599 32 130 12.5 5.5 9.0 3.2 199 chr2L 12807400 intergenic CR43818 - chr2L 12807500 intergenic CR43818 - chr2L 12807599 intergenic CR43818 - chr2L_32_12805001 chr2L_12805001 RAL-307_125b 490 chr2L 12835509 12835526 chr2L 12835668 12835685 8 159 13.5 0.5 7.0 1.0 176 chr2L 12835509 intergenic not near genes chr2L 12835597 intergenic not near genes chr2L 12835685 intergenic not near genes chr2L_8_12835001 chr2L_12835001 RAL-307_125b 491 chr2L 12835527 12835582 chr2L 12835665 12835736 13 156 5.0 0.5 2.8 3.4 209 chr2L 12835527 intergenic not near genes chr2L 12835632 intergenic not near genes chr2L 12835736 intergenic not near genes chr2L_13_12835001 chr2L_12835001 RAL-307_125b 492 chr2L 12848381 12848457 chr2L 12848523 12848585 20 137 6.0 5.0 5.5 3.1 204 chr2L 12848381 intergenic not near genes chr2L 12848483 intergenic not near genes chr2L 12848585 intergenic not near genes chr2L_20_12845001 chr2L_12845001 RAL-307_125b 493 chr2L 12861658 12861690 chr2L 12863173 12863207 hobo 10 1513 9.5 7.0 8.2 1.1 1549 chr2L 12861658 intergenic not near genes chr2L 12862432 intergenic not near genes chr2L 12863207 intergenic not near genes chr2L_10_12860001 chr2L_12860001 RAL-307_125b 494 chr2L 12861691 12861713 chr2L 12863172 12863230 hobo 6 1499 8.0 7.0 7.5 0.7 1539 chr2L 12861691 intergenic not near genes chr2L 12862460 intergenic not near genes chr2L 12863230 intergenic not near genes chr2L_6_12860001 chr2L_12860001 RAL-307_125b 495 chr2L 12893983 12894045 chr2L 12895500 12895525 hobo 20 1506 10.5 10.0 10.2 1.8 1542 chr2L 12893983 intergenic not near genes chr2L 12894754 intergenic not near genes chr2L 12895525 intergenic not near genes chr2L_20_12890001 chr2L_12890001 RAL-307_125b 496 chr2L 12905433 12905497 chr2L 12905567 12905631 22 133 12.0 9.5 10.8 1.9 198 chr2L 12905433 intergenic not near genes chr2L 12905532 intergenic not near genes chr2L 12905631 intergenic not near genes chr2L_22_12905001 chr2L_12905001 RAL-307_125b 497 chr2L 12933806 12933877 chr2L 12941323 12941363 blood 37 7514 9.0 6.0 7.5 4.4 7557 chr2L 12933806 intergenic not near genes chr2L 12937584 intergenic not near genes chr2L 12941363 intergenic not near genes chr2L_37_12935001 chr2L_12935001 RAL-307_125b 498 chr2L 12989027 12989067 chr2L 12989152 12989204 13 129 8.0 7.0 7.5 1.5 177 chr2L 12989027 intergenic not near genes chr2L 12989116 intergenic not near genes chr2L 12989204 intergenic not near genes chr2L_13_12985001 chr2L_12985001 RAL-307_125b 499 chr2L 12989068 12989077 chr2L 12989138 12989199 6 115 6.5 5.0 5.8 0.9 131 chr2L 12989068 intergenic not near genes chr2L 12989134 intergenic not near genes chr2L 12989199 intergenic not near genes chr2L_6_12985001 chr2L_12985001 RAL-307_125b 500 chr2L 13036206 13036268 chr2L 13036498 13036560 X-element 30 292 12.0 16.0 14.0 2.0 354 chr2L 13036206 intron CG9932 - chr2L 13036383 intron CG9932 - chr2L 13036560 intron CG9932 - chr2L_30_13035001 chr2L_13035001 RAL-307_125b 501 chr2L 13043352 13043435 chr2L 13043482 13043518 25 126 13.0 15.5 14.2 1.6 166 chr2L 13043352 intron CG9932 - chr2L 13043435 intron CG9932 - chr2L 13043518 intron CG9932 - chr2L_25_13040001 chr2L_13040001 RAL-307_125b 502 chr2L 13153952 13154096 chr2L 13154090 13154222 7 127 0.0 0.0 0.0 7.0 270 chr2L 13153952 intergenic not near genes chr2L 13154087 intergenic not near genes chr2L 13154222 intergenic not near genes chr2L_7_13150001 chr2L_13150001 RAL-307_125b 503 chr2L 13185278 13185314 chr2L 13185407 13185443 15 127 20.5 8.5 14.5 1.0 165 chr2L 13185278 3` UTR CG16974 - chr2L 13185360 3` UTR CG16974 - chr2L 13185443 exon CG16974 - chr2L_15_13185001 chr2L_13185001 RAL-307_125b 504 chr2L 13185332 13185341 chr2L 13185401 13185470 7 120 14.0 8.0 11.0 0.6 138 chr2L 13185332 3` UTR CG16974 - chr2L 13185401 3` UTR CG16974 - chr2L 13185470 exon CG16974 - chr2L_7_13185001 chr2L_13185001 RAL-307_125b 505 chr2L 13241901 13241981 chr2L 13244342 13244346 BS 8 2428 8.0 5.0 6.5 1.1 2445 chr2L 13241901 5` UTR CR45330 + chr2L 13243124 intron CR45330 + chr2L 13244346 5` UTR CR45330 + chr2L_8_13240001 chr2L_13240001 RAL-307_125b 506 chr2L 13248871 13248946 chr2L 13249002 13249075 29 125 11.0 6.5 8.8 3.0 204 chr2L 13248871 intron CG16820 + chr2L 13248973 intron CG16820 + chr2L 13249075 intron CG16820 + chr2L_29_13245001 chr2L_13245001 RAL-307_125b 507 chr2L 13266336 13266362 chr2L 13266472 13266500 18 134 2.5 10.0 6.2 2.5 164 chr2L 13266336 intron CG44085 + chr2L 13266418 intron CG44085 + chr2L 13266500 intron CG44085 + chr2L_18_13265001 chr2L_13265001 RAL-307_125b 508 chr2L 13266363 13266405 chr2L 13266466 13266538 28 130 2.5 9.0 5.8 4.1 175 chr2L 13266363 intron CG44085 + chr2L 13266450 intron CG44085 + chr2L 13266538 intron CG44085 + chr2L_28_13265001 chr2L_13265001 RAL-307_125b 509 chr2L 13339243 13339315 chr2L 13339535 13339593 25 288 5.0 3.0 4.0 5.0 350 chr2L 13339243 intergenic not near genes chr2L 13339418 intergenic not near genes chr2L 13339593 intergenic not near genes chr2L_25_13335001 chr2L_13335001 RAL-307_125b 510 chr2L 13398670 13398747 chr2L 13398800 13398877 28 126 10.0 10.0 10.0 2.5 207 chr2L 13398670 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398877 3` UTR CR44600 - chr2L_28_13395001 chr2L_13395001 RAL-307_125b 511 chr2L 13405602 13405680 chr2L 13410449 13410505 Doc 27 4840 5.0 7.0 6.0 3.9 4903 chr2L 13405602 exon CG7110 + chr2L 13408054 intron CG7110 + chr2L 13410505 intron CG7110 + chr2L_27_13405001 chr2L_13405001 RAL-307_125b 512 chr2L 13449411 13449492 chr2L 13456897 13456978 Quasimodo 19 7484 4.0 7.0 5.5 2.9 7567 chr2L 13449411 intron,intron CG42784 +,Hsp60D - chr2L 13453194 intron CG42784 + chr2L 13456978 intron CG42784 + chr2L_19_13450001 chr2L_13450001 RAL-307_125b 513 chr2L 13481434 13481464 chr2L 13482064 13482121 jockey 13 653 16.5 8.5 12.5 1.0 687 chr2L 13481434 intron CG42784 + chr2L 13481778 intron CG42784 + chr2L 13482121 intron CG42784 + chr2L_13_13480001 chr2L_13480001 RAL-307_125b 514 chr2L 13522241 13522291 chr2L 13527597 13527603 Transpac 16 5346 3.0 24.5 13.8 1.1 5362 chr2L 13522241 intron B4 - chr2L 13524922 intron B4 - chr2L 13527603 intron B4 - chr2L_16_13520001 chr2L_13520001 RAL-307_125b 515 chr2L 13528664 13528719 chr2L 13528791 13528846 10 126 10.5 12.5 11.5 0.8 182 chr2L 13528664 intron B4 - chr2L 13528755 intron B4 - chr2L 13528846 intron B4 - chr2L_10_13525001 chr2L_13525001 RAL-307_125b 516 chr2L 13560361 13560421 chr2L 13565232 13565292 F-element 32 4871 12.5 11.0 11.8 2.5 4931 chr2L 13560361 intron kuz + chr2L 13562826 intron kuz + chr2L 13565292 intron kuz + chr2L_32_13560001 chr2L_13560001 RAL-307_125b 517 chr2L 13577355 13577384 chr2L 13577483 13577512 8 126 9.5 15.0 12.2 0.6 157 chr2L 13577355 intron kuz + chr2L 13577434 intron kuz + chr2L 13577512 intron kuz + chr2L_8_13575001 chr2L_13575001 RAL-307_125b 518 chr2L 13609535 13609555 chr2L 13609748 13609769 13 214 9.0 15.0 12.0 1.0 234 chr2L 13609535 intron kuz + chr2L 13609652 intron kuz + chr2L 13609769 intron kuz + chr2L_13_13605001 chr2L_13605001 RAL-307_125b 519 chr2L 13622090 13622115 chr2L 13622239 13622248 12 147 23.0 3.5 13.2 0.8 158 chr2L 13622090 intron kuz + chr2L 13622169 intron kuz + chr2L 13622248 intron kuz + chr2L_12_13620001 chr2L_13620001 RAL-307_125b 520 chr2L 13622117 13622169 chr2L 13622235 13622318 9 126 6.0 3.0 4.5 1.6 201 chr2L 13622117 intron kuz + chr2L 13622218 intron kuz + chr2L 13622318 intron kuz + chr2L_9_13620001 chr2L_13620001 RAL-307_125b 521 chr2L 13680741 13680817 chr2L 13680934 13681012 19 195 4.5 4.5 4.5 3.5 271 chr2L 13680741 intron CG31814 - chr2L 13680876 intron CG31814 - chr2L 13681012 intron CG31814 - chr2L_19_13680001 chr2L_13680001 RAL-307_125b 522 chr2L 13683134 13683169 chr2L 13683265 13683275 6 121 14.0 1.0 7.5 0.7 141 chr2L 13683134 exon CG31814 - chr2L 13683204 exon CG31814 - chr2L 13683275 intron CG31814 - chr2L_6_13680001 chr2L_13680001 RAL-307_125b 523 chr2L 13720193 13720215 chr2L 13720326 13720352 9 137 19.0 0.0 9.5 0.9 159 chr2L 13720193 intergenic not near genes chr2L 13720272 intergenic not near genes chr2L 13720352 intergenic not near genes chr2L_9_13720001 chr2L_13720001 RAL-307_125b 524 chr2L 13740035 13740086 chr2L 13740163 13740216 11 126 1.5 10.0 5.8 1.6 181 chr2L 13740035 intergenic not near genes chr2L 13740126 intergenic not near genes chr2L 13740216 intergenic not near genes chr2L_11_13740001 chr2L_13740001 RAL-307_125b 525 chr2L 13747271 13747343 chr2L 13747421 13747493 41 149 9.5 5.0 7.2 5.0 222 chr2L 13747271 intron,intron CR44846 +,TM9SF4 + chr2L 13747382 intron,intron CR44846 +,TM9SF4 + chr2L 13747493 intron,intron CR44846 +,TM9SF4 + chr2L_41_13745001 chr2L_13745001 RAL-307_125b 526 chr2L 13749162 13749190 chr2L 13749295 13749323 7 133 0.0 3.5 1.8 2.5 161 chr2L 13749162 intron,intron CR44846 +,TM9SF4 + chr2L 13749242 intron,intron CR44846 +,TM9SF4 + chr2L 13749323 intron,intron CR44846 +,TM9SF4 + chr2L_7_13745001 chr2L_13745001 RAL-307_125b 527 chr2L 13754702 13754718 chr2L 13754833 13754851 8 137 3.0 0.0 1.5 3.2 149 chr2L 13754702 intron,intron CR44846 +,TM9SF4 + chr2L 13754776 intron,intron CR44846 +,TM9SF4 + chr2L 13754851 intron,intron CR44846 +,TM9SF4 + chr2L_8_13750001 chr2L_13750001 RAL-307_125b 528 chr2L 13761770 13761827 chr2L 13762931 13762988 Doc 31 1157 6.0 12.0 9.0 3.1 1218 chr2L 13761770 intron TM9SF4 + chr2L 13762379 intron TM9SF4 + chr2L 13762988 intron TM9SF4 + chr2L_31_13760001 chr2L_13760001 RAL-307_125b 529 chr2L 13800134 13800139 chr2L 13800288 13800293 4 154 26.5 14.0 20.2 0.2 159 chr2L 13800134 intergenic Sec71 + chr2L 13800214 intergenic not near genes chr2L 13800293 intergenic not near genes chr2L_4_13800001 chr2L_13800001 RAL-307_125b 530 chr2L 13800142 13800202 chr2L 13800283 13800356 31 154 11.0 13.5 12.2 2.3 214 chr2L 13800142 intergenic Sec71 + chr2L 13800249 intergenic not near genes chr2L 13800356 intergenic not near genes chr2L_31_13800001 chr2L_13800001 RAL-307_125b 531 chr2L 13842081 13842161 chr2L 13842215 13842295 35 133 9.5 0.5 5.0 5.8 214 chr2L 13842081 intron CenG1A + chr2L 13842188 intron CenG1A + chr2L 13842295 intron CenG1A + chr2L_35_13840001 chr2L_13840001 RAL-307_125b 532 chr2L 13853044 13853106 chr2L 13862244 13862306 roo 28 9196 11.5 14.5 13.0 2.0 9262 chr2L 13853044 intron CenG1A + chr2L 13857675 intron CenG1A + chr2L 13862306 intron CenG1A + chr2L_28_13855001 chr2L_13855001 RAL-307_125b 533 chr2L 13898994 13899072 chr2L 13899123 13899138 9 113 7.0 5.0 6.0 1.3 144 chr2L 13898994 3` UTR Smg5 - chr2L 13899066 3` UTR Smg5 - chr2L 13899138 3` UTR Smg5 - chr2L_9_13895001 chr2L_13895001 RAL-307_125b 534 chr2L 13913547 13913605 chr2L 13913709 13913768 23 162 10.0 11.5 10.8 1.9 221 chr2L 13913547 intergenic not near genes chr2L 13913658 intergenic not near genes chr2L 13913768 intergenic not near genes chr2L_23_13910001 chr2L_13910001 RAL-307_125b 535 chr2L 13988231 13988303 chr2L 13988368 13988440 43 135 10.0 13.0 11.5 3.4 209 chr2L 13988231 intron rk - chr2L 13988336 intron rk - chr2L 13988440 intron rk - chr2L_43_13985001 chr2L_13985001 RAL-307_125b 536 chr2L 14246210 14246249 chr2L 14246641 14246678 22 431 14.0 0.5 7.2 2.7 468 chr2L 14246210 intergenic not near genes chr2L 14246444 intergenic not near genes chr2L 14246678 intergenic not near genes chr2L_22_14245001 chr2L_14245001 RAL-307_125b 537 chr2L 14298441 14298514 chr2L 14298569 14298572 7 117 4.5 0.0 2.2 2.2 131 chr2L 14298441 intron wb + chr2L 14298506 intron wb + chr2L 14298572 intron wb + chr2L_7_14295001 chr2L_14295001 RAL-307_125b 538 chr2L 14301710 14301746 chr2L 14301844 14301880 12 134 9.0 0.0 4.5 2.2 170 chr2L 14301710 intron wb + chr2L 14301795 intron wb + chr2L 14301880 intron wb + chr2L_12_14300001 chr2L_14300001 RAL-307_125b 539 chr2L 14340482 14340520 chr2L 14340608 14340646 25 126 9.5 8.0 8.8 2.6 164 chr2L 14340482 intron CG33090 + chr2L 14340564 intron CG33090 + chr2L 14340646 intron CG33090 + chr2L_25_14340001 chr2L_14340001 RAL-307_125b 540 chr2L 14374728 14374800 chr2L 14374869 14374941 34 138 6.5 10.0 8.2 3.7 213 chr2L 14374728 intergenic not near genes chr2L 14374834 intergenic not near genes chr2L 14374941 intergenic not near genes chr2L_34_14370001 chr2L_14370001 RAL-307_125b 541 chr2L 14503384 14503427 chr2L 14503513 14503556 14 129 3.5 5.0 4.2 2.7 172 chr2L 14503384 intergenic not near genes chr2L 14503470 intergenic not near genes chr2L 14503556 intergenic not near genes chr2L_14_14500001 chr2L_14500001 RAL-307_125b 542 chr2L 14549102 14549177 chr2L 14549228 14549303 42 124 10.5 10.5 10.5 3.7 201 chr2L 14549102 5` UTR CG4218 - chr2L 14549202 intergenic CG4218 - chr2L 14549303 intergenic CG4218 - chr2L_42_14545001 chr2L_14545001 RAL-307_125b 543 chr2L 14560600 14560634 chr2L 14560733 14560767 17 129 8.0 16.5 12.2 1.3 167 chr2L 14560600 intergenic CR44855 + chr2L 14560684 intergenic CR44855 + chr2L 14560767 intergenic CR44855 + chr2L_17_14560001 chr2L_14560001 RAL-307_125b 544 chr2L 14570671 14570719 chr2L 14570802 14570848 8 130 6.0 5.0 5.5 1.2 177 chr2L 14570671 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570848 intergenic not near genes chr2L_8_14570001 chr2L_14570001 RAL-307_125b 545 chr2L 14588626 14588668 chr2L 14588967 14589009 10 341 13.0 4.5 8.8 1.0 383 chr2L 14588626 intergenic CG42680 - chr2L 14588818 intergenic not near genes chr2L 14589009 intergenic not near genes chr2L_10_14585001 chr2L_14585001 RAL-307_125b 546 chr2L 14601933 14602001 chr2L 14602061 14602135 34 132 12.0 5.0 8.5 3.6 202 chr2L 14601933 exon osp - chr2L 14602034 intron osp - chr2L 14602135 exon osp - chr2L_34_14600001 chr2L_14600001 RAL-307_125b 547 chr2L 14602002 14602003 chr2L 14602059 14602137 4 115 12.0 5.0 8.5 0.4 135 chr2L 14602002 intron osp - chr2L 14602070 intron osp - chr2L 14602137 exon osp - chr2L_4_14600001 chr2L_14600001 RAL-307_125b 548 chr2L 14618868 14618889 chr2L 14619299 14619320 jockey 9 431 9.0 10.0 9.5 0.9 452 chr2L 14618868 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619320 intron osp - chr2L_9_14615001 chr2L_14615001 RAL-307_125b 549 chr2L 14621327 14621404 chr2L 14621477 14621496 22 137 8.5 3.5 6.0 3.1 169 chr2L 14621327 intron osp - chr2L 14621412 intron osp - chr2L 14621496 intron osp - chr2L_22_14620001 chr2L_14620001 RAL-307_125b 550 chr2L 14624524 14624551 chr2L 14624653 14624680 7 129 10.0 15.0 12.5 0.5 156 chr2L 14624524 intron osp - chr2L 14624602 intron osp - chr2L 14624680 intron osp - chr2L_7_14620001 chr2L_14620001 RAL-307_125b 551 chr2L 14686243 14686316 chr2L 14686371 14686439 29 122 9.0 9.5 9.2 2.8 196 chr2L 14686243 intron osp - chr2L 14686341 intron osp - chr2L 14686439 intron osp - chr2L_29_14685001 chr2L_14685001 RAL-307_125b 552 chr2L 14694210 14694286 chr2L 14694384 14694459 32 173 8.5 10.0 9.2 3.1 249 chr2L 14694210 intergenic not near genes chr2L 14694334 intergenic not near genes chr2L 14694459 intergenic not near genes chr2L_32_14690001 chr2L_14690001 RAL-307_125b 553 chr2L 14707161 14707240 chr2L 14707330 14707369 46 166 17.5 0.5 9.0 4.6 208 chr2L 14707161 intergenic not near genes chr2L 14707265 intergenic not near genes chr2L 14707369 intergenic not near genes chr2L_46_14705001 chr2L_14705001 RAL-307_125b 554 chr2L 14707571 14707577 chr2L 14708626 14708632 4 1055 15.5 49.0 32.2 0.1 1061 chr2L 14707571 intergenic not near genes chr2L 14708102 intergenic not near genes chr2L 14708632 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-307_125b 555 chr2L 14707581 14707617 chr2L 14708616 14708665 20 1053 24.0 47.5 35.8 0.5 1084 chr2L 14707581 intergenic not near genes chr2L 14708123 intergenic not near genes chr2L 14708665 intergenic not near genes chr2L_20_14705001 chr2L_14705001 RAL-307_125b 556 chr2L 14706737 14706796 chr2L 14708949 14709021 41 2213 63.0 77.0 70.0 0.6 2284 chr2L 14706737 intergenic not near genes chr2L 14707879 intergenic not near genes chr2L 14709021 intergenic not near genes chr2L_41_14705001 chr2L_14705001 RAL-307_125b 557 chr2L 14726535 14726566 chr2L 14726667 14726698 11 131 8.0 14.0 11.0 0.9 163 chr2L 14726535 intron CG42685 - chr2L 14726616 intron CG42685 - chr2L 14726698 intron CG42685 - chr2L_11_14725001 chr2L_14725001 RAL-307_125b 558 chr2L 14747522 14747563 chr2L 14747619 14747629 18 123 7.5 5.5 6.5 2.4 107 chr2L 14747522 intergenic not near genes chr2L 14747576 intergenic not near genes chr2L 14747629 intergenic not near genes chr2L_18_14745001 chr2L_14745001 RAL-307_125b 559 chr2L 14778770 14778804 chr2L 14779108 14779142 9 336 8.0 7.0 7.5 1.1 372 chr2L 14778770 intergenic not near genes chr2L 14778956 intergenic not near genes chr2L 14779142 intergenic not near genes chr2L_9_14775001 chr2L_14775001 RAL-307_125b 560 chr2L 14778806 14778839 chr2L 14779104 14779134 8 320 4.0 6.0 5.0 1.3 328 chr2L 14778806 intergenic not near genes chr2L 14778970 intergenic not near genes chr2L 14779134 intergenic not near genes chr2L_8_14775001 chr2L_14775001 RAL-307_125b 561 chr2L 14782447 14782463 chr2L 14782580 14782595 7 133 6.5 11.5 9.0 0.7 148 chr2L 14782447 intergenic not near genes chr2L 14782521 intergenic not near genes chr2L 14782595 intergenic not near genes chr2L_7_14780001 chr2L_14780001 RAL-307_125b 562 chr2L 14787085 14787104 chr2L 14787211 14787215 6 124 19.0 1.5 10.2 0.5 130 chr2L 14787085 intergenic not near genes chr2L 14787150 intergenic not near genes chr2L 14787215 intergenic not near genes chr2L_6_14785001 chr2L_14785001 RAL-307_125b 563 chr2L 14803839 14803909 chr2L 14809087 14809138 copia 31 5250 7.0 13.5 10.2 2.8 5299 chr2L 14803839 intergenic not near genes chr2L 14806488 intergenic not near genes chr2L 14809138 intergenic not near genes chr2L_31_14805001 chr2L_14805001 RAL-307_125b 564 chr2L 14833745 14833819 chr2L 14833898 14833973 24 151 6.0 7.5 6.8 3.1 228 chr2L 14833745 intergenic not near genes chr2L 14833859 intergenic not near genes chr2L 14833973 intergenic not near genes chr2L_24_14830001 chr2L_14830001 RAL-307_125b 565 chr2L 14887640 14887687 chr2L 14887768 14887815 16 126 7.0 4.0 5.5 2.5 175 chr2L 14887640 intergenic not near genes chr2L 14887728 intergenic not near genes chr2L 14887815 intergenic not near genes chr2L_16_14885001 chr2L_14885001 RAL-307_125b 566 chr2L 14889908 14889983 chr2L 14890383 14890423 jockey 21 470 7.0 2.0 4.5 3.8 515 chr2L 14889908 intergenic not near genes chr2L 14890166 intergenic not near genes chr2L 14890423 intergenic not near genes chr2L_21_14890001 chr2L_14890001 RAL-307_125b 567 chr2L 14950420 14950475 chr2L 14950933 14950974 24 519 10.5 7.0 8.8 2.4 554 chr2L 14950420 intron CG42313 - chr2L 14950697 intron CG42313 - chr2L 14950974 intron CG42313 - chr2L_24_14950001 chr2L_14950001 RAL-307_125b 568 chr2L 14982093 14982101 chr2L 14982250 14982258 4 157 15.0 0.0 7.5 0.5 165 chr2L 14982093 intron mol - chr2L 14982176 intron mol - chr2L 14982258 intron mol - chr2L_4_14980001 chr2L_14980001 RAL-307_125b 569 chr2L 14982103 14982290 chr2L 14982247 14982426 28 141 0.0 0.0 0.0 28.0 323 chr2L 14982103 intron mol - chr2L 14982264 intron mol - chr2L 14982426 intron mol - chr2L_28_14980001 chr2L_14980001 RAL-307_125b 570 chr2L 14984347 14984402 chr2L 14991990 14992054 opus 26 7648 10.5 13.0 11.8 2.0 7707 chr2L 14984347 intron mol - chr2L 14988200 intron mol - chr2L 14992054 intron mol - chr2L_26_14985001 chr2L_14985001 RAL-307_125b 571 chr2L 15013103 15013170 chr2L 15013257 15013329 18 154 8.0 5.0 6.5 2.4 226 chr2L 15013103 intergenic CR43856 - chr2L 15013216 intergenic not near genes chr2L 15013329 intergenic not near genes chr2L_18_15010001 chr2L_15010001 RAL-307_125b 572 chr2L 15014571 15014652 chr2L 15014700 15014781 24 128 3.0 6.0 4.5 4.4 210 chr2L 15014571 intergenic not near genes chr2L 15014676 intergenic not near genes chr2L 15014781 intergenic not near genes chr2L_24_15010001 chr2L_15010001 RAL-307_125b 573 chr2L 15021368 15021429 chr2L 15021620 15021686 14 252 4.0 5.5 4.8 2.4 318 chr2L 15021368 intron GABA-B-R1 + chr2L 15021527 intron GABA-B-R1 + chr2L 15021686 intron GABA-B-R1 + chr2L_14_15020001 chr2L_15020001 RAL-307_125b 574 chr2L 15031509 15031537 chr2L 15031799 15031827 16 288 23.0 10.0 16.5 0.9 318 chr2L 15031509 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031668 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031827 intron GABA-B-R1 + chr2L_16_15030001 chr2L_15030001 RAL-307_125b 575 chr2L 15031552 15031584 chr2L 15031797 15031874 11 282 11.5 9.5 10.5 1.0 322 chr2L 15031552 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031713 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031874 intron GABA-B-R1 + chr2L_11_15030001 chr2L_15030001 RAL-307_125b 576 chr2L 15044657 15044734 chr2L 15044783 15044866 21 123 4.5 2.0 3.2 5.0 209 chr2L 15044657 intergenic ck - chr2L 15044762 intergenic ck - chr2L 15044866 intergenic ck - chr2L_21_15040001 chr2L_15040001 RAL-307_125b 577 chr2L 15078020 15078096 chr2L 15078158 15078234 30 134 10.0 9.0 9.5 2.9 214 chr2L 15078020 intron CG15270 + chr2L 15078127 intron CG15270 + chr2L 15078234 intron CG15270 + chr2L_30_15075001 chr2L_15075001 RAL-307_125b 578 chr2L 15098510 15098542 chr2L 15098626 15098672 18 127 14.5 5.0 9.8 1.7 162 chr2L 15098510 intergenic not near genes chr2L 15098591 intergenic not near genes chr2L 15098672 intergenic not near genes chr2L_18_15095001 chr2L_15095001 RAL-307_125b 579 chr2L 15103817 15103861 chr2L 15103964 15104001 22 147 14.5 20.0 17.2 1.2 184 chr2L 15103817 intergenic not near genes chr2L 15103909 intergenic not near genes chr2L 15104001 intergenic not near genes chr2L_22_15100001 chr2L_15100001 RAL-307_125b 580 chr2L 15138936 15138982 chr2L 15139074 15139120 7 138 13.0 0.0 6.5 0.9 184 chr2L 15138936 intergenic not near genes chr2L 15139028 intergenic not near genes chr2L 15139120 intergenic not near genes chr2L_7_15135001 chr2L_15135001 RAL-307_125b 581 chr2L 15161200 15161262 chr2L 15161386 15161442 24 182 5.5 5.0 5.2 3.9 242 chr2L 15161200 intergenic CR44770 + chr2L 15161321 intergenic CR44770 + chr2L 15161442 intergenic CR44770 +,CG4168 - chr2L_24_15160001 chr2L_15160001 RAL-307_125b 582 chr2L 15226328 15226395 chr2L 15226452 15226521 14 124 10.5 5.0 7.8 1.6 193 chr2L 15226328 intergenic not near genes chr2L 15226424 intergenic not near genes chr2L 15226521 intergenic not near genes chr2L_14_15225001 chr2L_15225001 RAL-307_125b 583 chr2L 15318909 15318978 chr2L 15319035 15319105 13 127 8.0 6.5 7.2 1.6 196 chr2L 15318909 intergenic nht - chr2L 15319007 intergenic nht - chr2L 15319105 intergenic nht - chr2L_13_15315001 chr2L_15315001 RAL-307_125b 584 chr2L 15332187 15332238 chr2L 15332598 15332605 9 405 8.0 1.5 4.8 1.6 418 chr2L 15332187 intergenic not near genes chr2L 15332396 intergenic not near genes chr2L 15332605 intergenic not near genes chr2L_9_15330001 chr2L_15330001 RAL-307_125b 585 chr2L 15343496 15343566 chr2L 15343622 15343708 11 135 4.0 0.0 2.0 3.7 212 chr2L 15343496 intergenic not near genes chr2L 15343602 intergenic not near genes chr2L 15343708 intergenic not near genes chr2L_11_15340001 chr2L_15340001 RAL-307_125b 586 chr2L 15352926 15352999 chr2L 15353052 15353081 7 110 14.0 15.0 14.5 0.5 155 chr2L 15352926 intergenic not near genes chr2L 15353004 intergenic not near genes chr2L 15353081 intergenic not near genes chr2L_7_15350001 chr2L_15350001 RAL-307_125b 587 chr2L 15371544 15371616 chr2L 15371812 15371879 33 264 11.0 11.0 11.0 2.8 335 chr2L 15371544 intergenic not near genes chr2L 15371712 intergenic not near genes chr2L 15371879 intergenic not near genes chr2L_33_15370001 chr2L_15370001 RAL-307_125b 588 chr2L 15375770 15375845 chr2L 15375932 15376007 17 159 5.5 5.5 5.5 2.6 237 chr2L 15375770 intergenic not near genes chr2L 15375888 intergenic not near genes chr2L 15376007 intergenic not near genes chr2L_17_15375001 chr2L_15375001 RAL-307_125b 589 chr2L 15446005 15446083 chr2L 15453524 15453542 blood 26 7516 7.5 1.5 4.5 4.7 7537 chr2L 15446005 intergenic not near genes chr2L 15449774 intergenic not near genes chr2L 15453542 intergenic not near genes chr2L_26_15445001 chr2L_15445001 RAL-307_125b 590 chr2L 15458226 15458278 chr2L 15458364 15458416 19 138 3.0 8.0 5.5 2.9 190 chr2L 15458226 intergenic not near genes chr2L 15458321 intergenic not near genes chr2L 15458416 intergenic not near genes chr2L_19_15455001 chr2L_15455001 RAL-307_125b 591 chr2L 15488499 15488571 chr2L 15488627 15488695 32 127 1.5 8.0 4.8 5.5 196 chr2L 15488499 intergenic not near genes chr2L 15488597 intergenic not near genes chr2L 15488695 intergenic not near genes chr2L_32_15485001 chr2L_15485001 RAL-307_125b 592 chr2L 15490031 15490045 chr2L 15490162 15490176 9 131 0.0 8.0 4.0 1.8 145 chr2L 15490031 intergenic not near genes chr2L 15490104 intergenic not near genes chr2L 15490176 intergenic not near genes chr2L_9_15490001 chr2L_15490001 RAL-307_125b 593 chr2L 15514278 15514326 chr2L 15514412 15514460 27 132 15.0 12.0 13.5 1.9 182 chr2L 15514278 intergenic not near genes chr2L 15514369 intergenic not near genes chr2L 15514460 intergenic not near genes chr2L_27_15510001 chr2L_15510001 RAL-307_125b 594 chr2L 15586370 15586409 chr2L 15593472 15593510 297 17 7102 14.0 11.0 12.5 1.3 7140 chr2L 15586370 intergenic not near genes chr2L 15589940 intergenic not near genes chr2L 15593510 intergenic not near genes chr2L_17_15585001 chr2L_15585001 RAL-307_125b 595 chr2L 15586410 15586429 chr2L 15593463 15593531 297 10 7097 12.0 9.5 10.8 0.8 7121 chr2L 15586410 intergenic not near genes chr2L 15589970 intergenic not near genes chr2L 15593531 intergenic not near genes chr2L_10_15585001 chr2L_15585001 RAL-307_125b 596 chr2L 15598735 15598799 chr2L 15598847 15598928 18 126 6.5 0.5 3.5 4.0 193 chr2L 15598735 intergenic not near genes chr2L 15598832 intergenic not near genes chr2L 15598928 intergenic not near genes chr2L_18_15595001 chr2L_15595001 RAL-307_125b 597 chr2L 15736939 15737007 chr2L 15737064 15737074 31 128 11.0 11.5 11.2 2.5 135 chr2L 15736939 intron CycE - chr2L 15737006 intron CycE - chr2L 15737074 intron CycE - chr2L_31_15735001 chr2L_15735001 RAL-307_125b 598 chr2L 15749979 15750267 chr2L 15750142 15750401 12 157 0.0 0.0 0.0 12.0 422 chr2L 15749979 intron l(2)35Di - chr2L 15750190 intron l(2)35Di - chr2L 15750401 intron l(2)35Di - chr2L_12_15750001 chr2L_15750001 RAL-307_125b 599 chr2L 15823300 15823364 chr2L 15823426 15823490 18 125 12.0 2.5 7.2 2.2 190 chr2L 15823300 intergenic CR44601 - chr2L 15823395 intergenic CR44601 - chr2L 15823490 intergenic not near genes chr2L_18_15820001 chr2L_15820001 RAL-307_125b 600 chr2L 15826846 15826892 chr2L 15829290 15829336 Tabor 25 2444 8.0 16.5 12.2 1.9 2490 chr2L 15826846 intergenic not near genes chr2L 15828091 intergenic not near genes chr2L 15829336 intergenic not near genes chr2L_25_15825001 chr2L_15825001 RAL-307_125b 601 chr2L 15871248 15871313 chr2L 15871381 15871438 35 132 10.5 11.0 10.8 3.0 190 chr2L 15871248 intergenic not near genes chr2L 15871343 intergenic not near genes chr2L 15871438 intergenic not near genes chr2L_35_15870001 chr2L_15870001 RAL-307_125b 602 chr2L 15933537 15933598 chr2L 15936110 15936186 28 2585 37.0 37.0 37.0 0.7 2649 chr2L 15933537 intron beat-Ib - chr2L 15934862 intron beat-Ib - chr2L 15936186 intron beat-Ib - chr2L_28_15930001 chr2L_15930001 RAL-307_125b 603 chr2L 15933218 15933293 chr2L 15936073 15936149 36 2859 76.0 36.5 56.2 0.6 2931 chr2L 15933218 intron beat-Ib - chr2L 15934684 intron beat-Ib - chr2L 15936149 intron beat-Ib - chr2L_36_15930001 chr2L_15930001 RAL-307_125b 604 chr2L 15955984 15956000 chr2L 15957501 15957517 hobo 10 1517 23.5 14.5 19.0 0.5 1533 chr2L 15955984 intron beat-Ib - chr2L 15956750 intron beat-Ib - chr2L 15957517 intron beat-Ib - chr2L_10_15955001 chr2L_15955001 RAL-307_125b 605 chr2L 15956001 15956056 chr2L 15957493 15957512 hobo 26 1510 10.5 14.0 12.2 2.0 1511 chr2L 15956001 intron beat-Ib - chr2L 15956756 intron beat-Ib - chr2L 15957512 intron beat-Ib - chr2L_26_15955001 chr2L_15955001 RAL-307_125b 606 chr2L 16001442 16001489 chr2L 16001575 16001627 20 138 2.5 9.5 6.0 2.9 185 chr2L 16001442 intron beat-Ic + chr2L 16001534 intron beat-Ic + chr2L 16001627 intron beat-Ic + chr2L_20_16000001 chr2L_16000001 RAL-307_125b 607 chr2L 16008654 16008679 chr2L 16008805 16008830 15 151 4.5 4.5 4.5 2.7 176 chr2L 16008654 intron beat-Ic + chr2L 16008742 intron beat-Ic + chr2L 16008830 intron beat-Ic + chr2L_15_16005001 chr2L_16005001 RAL-307_125b 608 chr2L 16012079 16012142 chr2L 16012209 16012272 14 130 6.0 13.0 9.5 1.3 193 chr2L 16012079 intron beat-Ic + chr2L 16012176 intron beat-Ic + chr2L 16012272 intron beat-Ic + chr2L_14_16010001 chr2L_16010001 RAL-307_125b 609 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 21.0 34.0 27.5 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-307_125b 610 chr2L 16120082 16120085 chr2L 16120224 16120227 INE-1 4 142 9.0 7.0 8.0 0.4 145 chr2L 16120082 intergenic not near genes chr2L 16120154 intergenic not near genes chr2L 16120227 intergenic not near genes chr2L_4_16120001 chr2L_16120001 RAL-307_125b 611 chr2L 16141121 16141185 chr2L 16146378 16146442 copia 24 5255 13.5 9.5 11.5 1.9 5321 chr2L 16141121 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146442 intergenic not near genes chr2L_24_16140001 chr2L_16140001 RAL-307_125b 612 chr2L 16153694 16153761 chr2L 16160812 16160879 297 26 7115 7.5 9.5 8.5 2.7 7185 chr2L 16153694 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160879 intergenic not near genes chr2L_26_16155001 chr2L_16155001 RAL-307_125b 613 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 6 145889 21.0 34.0 27.5 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-307_125b 614 chr2L 16225322 16225389 chr2L 16225458 16225520 6 135 9.5 11.5 10.5 0.5 198 chr2L 16225322 intergenic not near genes chr2L 16225421 intergenic not near genes chr2L 16225520 intergenic not near genes chr2L_6_16225001 chr2L_16225001 RAL-307_125b 615 chr2L 16233626 16233652 chr2L 16233753 16233771 12 125 22.0 11.5 16.8 0.7 145 chr2L 16233626 intron CG42817 + chr2L 16233698 intron CG42817 + chr2L 16233771 intron CG42817 + chr2L_12_16230001 chr2L_16230001 RAL-307_125b 616 chr2L 16233654 16233688 chr2L 16233736 16233739 18 119 12.0 11.0 11.5 1.4 85 chr2L 16233654 intron CG42817 + chr2L 16233696 intron CG42817 + chr2L 16233739 intron CG42817 + chr2L_18_16230001 chr2L_16230001 RAL-307_125b 617 chr2L 16241578 16241648 chr2L 16241712 16241776 11 125 0.0 10.5 5.2 1.8 198 chr2L 16241578 intergenic CG42817 +,CG42818 + chr2L 16241677 intergenic CG42817 +,CG42818 + chr2L 16241776 intergenic CG42818 +,CG42817 + chr2L_11_16240001 chr2L_16240001 RAL-307_125b 618 chr2L 16242022 16242064 chr2L 16242164 16242206 16 142 11.5 0.0 5.8 2.4 184 chr2L 16242022 5` UTR CG42818 + chr2L 16242114 exon CG42818 + chr2L 16242206 exon CG42818 + chr2L_16_16240001 chr2L_16240001 RAL-307_125b 619 chr2L 16243677 16243704 chr2L 16243795 16243837 10 125 0.0 13.0 6.5 1.3 160 chr2L 16243677 exon CG42818 + chr2L 16243757 exon CG42818 + chr2L 16243837 exon CG42818 + chr2L_10_16240001 chr2L_16240001 RAL-307_125b 620 chr2L 16254845 16254917 chr2L 16255154 16255226 35 305 9.0 10.5 9.8 3.2 381 chr2L 16254845 intron PRL-1 - chr2L 16255036 intron PRL-1 - chr2L 16255226 intron PRL-1 - chr2L_35_16255001 chr2L_16255001 RAL-307_125b 621 chr2L 16280236 16280282 chr2L 16281432 16281492 1360 17 1204 13.0 12.5 12.8 1.2 1256 chr2L 16280236 intron crp - chr2L 16280864 intron crp - chr2L 16281492 intron crp - chr2L_17_16280001 chr2L_16280001 RAL-307_125b 622 chr2L 16354729 16354786 chr2L 16354870 16354928 25 141 7.0 8.5 7.8 2.8 199 chr2L 16354729 intergenic CaBP1 -,CG4455 + chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354928 3` UTR CaBP1 - chr2L_25_16350001 chr2L_16350001 RAL-307_125b 623 chr2L 16358597 16358634 chr2L 16358719 16358764 10 127 0.0 18.5 9.2 1.0 167 chr2L 16358597 intergenic not near genes chr2L 16358680 intergenic not near genes chr2L 16358764 intergenic not near genes chr2L_10_16355001 chr2L_16355001 RAL-307_125b 624 chr2L 16363909 16363971 chr2L 16364205 16364267 26 296 0.0 10.0 5.0 4.3 358 chr2L 16363909 intergenic not near genes chr2L 16364088 intergenic not near genes chr2L 16364267 intergenic not near genes chr2L_26_16360001 chr2L_16360001 RAL-307_125b 625 chr2L 16384452 16384518 chr2L 16384591 16384623 30 133 6.5 14.5 10.5 2.6 171 chr2L 16384452 intergenic not near genes chr2L 16384538 intergenic not near genes chr2L 16384623 intergenic not near genes chr2L_30_16380001 chr2L_16380001 RAL-307_125b 626 chr2L 16386434 16386446 chr2L 16386562 16386574 5 128 0.0 17.0 8.5 0.5 140 chr2L 16386434 intergenic not near genes chr2L 16386504 intergenic not near genes chr2L 16386574 intergenic not near genes chr2L_5_16385001 chr2L_16385001 RAL-307_125b 627 chr2L 16408098 16408105 chr2L 16408247 16408262 5 153 0.0 11.0 5.5 0.8 164 chr2L 16408098 intron CG5888 - chr2L 16408180 intron CG5888 - chr2L 16408262 intron CG5888 - chr2L_5_16405001 chr2L_16405001 RAL-307_125b 628 chr2L 16432459 16432514 chr2L 16432595 16432669 4 146 7.0 0.0 3.5 0.9 210 chr2L 16432459 intron CG5888 - chr2L 16432564 intron CG5888 - chr2L 16432669 intron CG5888 - chr2L_4_16430001 chr2L_16430001 RAL-307_125b 629 chr2L 16467844 16467921 chr2L 16467982 16468054 26 136 4.0 5.0 4.5 4.7 210 chr2L 16467844 intron dac - chr2L 16467949 intron dac - chr2L 16468054 exon dac - chr2L_26_16465001 chr2L_16465001 RAL-307_125b 630 chr2L 16488021 16488101 chr2L 16488148 16488223 34 119 8.0 8.5 8.2 3.7 202 chr2L 16488021 intergenic CG4580 + chr2L 16488122 intergenic CG4580 + chr2L 16488223 exon CG4580 + chr2L_34_16485001 chr2L_16485001 RAL-307_125b 631 chr2L 16511924 16511996 chr2L 16519088 16519173 HMS-Beagle 31 7176 13.0 3.0 8.0 3.4 7249 chr2L 16511924 intron CG5953 - chr2L 16515548 intron CG5953 - chr2L 16519173 intron CG5953 - chr2L_31_16515001 chr2L_16515001 RAL-307_125b 632 chr2L 16550607 16550661 chr2L 16550733 16550776 22 123 16.0 15.0 15.5 1.3 169 chr2L 16550607 intron CG42389 + chr2L 16550692 intron CG42389 + chr2L 16550776 intron CG42389 + chr2L_22_16550001 chr2L_16550001 RAL-307_125b 633 chr2L 16573233 16573262 chr2L 16573325 16573359 10 114 8.0 7.5 7.8 1.1 126 chr2L 16573233 intron CG42389 + chr2L 16573296 intron CG42389 + chr2L 16573359 intron CG42389 + chr2L_10_16570001 chr2L_16570001 RAL-307_125b 634 chr2L 16595659 16595736 chr2L 16596033 16596110 41 373 11.5 10.0 10.8 3.5 451 chr2L 16595659 intron CG42389 + chr2L 16595884 intron CG42389 + chr2L 16596110 intron CG42389 + chr2L_41_16595001 chr2L_16595001 RAL-307_125b 635 chr2L 16627673 16627746 chr2L 16627799 16627872 15 123 3.5 3.5 3.5 3.3 199 chr2L 16627673 intron CG42389 + chr2L 16627772 intron CG42389 + chr2L 16627872 intron CG42389 + chr2L_15_16625001 chr2L_16625001 RAL-307_125b 636 chr2L 16654659 16654731 chr2L 16654802 16654859 27 139 7.5 8.5 8.0 3.0 200 chr2L 16654659 intron CG42389 + chr2L 16654759 intron CG42389 + chr2L 16654859 intron CG42389 + chr2L_27_16650001 chr2L_16650001 RAL-307_125b 637 chr2L 16670383 16670449 chr2L 16670510 16670576 37 124 6.0 10.5 8.2 4.0 193 chr2L 16670383 intron Trpgamma - chr2L 16670480 intron Trpgamma - chr2L 16670576 intron Trpgamma - chr2L_37_16670001 chr2L_16670001 RAL-307_125b 638 chr2L 16709027 16709104 chr2L 16709161 16709227 47 132 11.5 9.0 10.2 4.2 200 chr2L 16709027 intron CG31808 - chr2L 16709127 intron CG31808 - chr2L 16709227 intron CG31808 - chr2L_47_16705001 chr2L_16705001 RAL-307_125b 639 chr2L 16718905 16718959 chr2L 16719069 16719111 10 160 0.0 9.5 4.8 1.7 206 chr2L 16718905 intron Cyt-c-d + chr2L 16719008 intron Cyt-c-d + chr2L 16719111 intron Cyt-c-d + chr2L_10_16715001 chr2L_16715001 RAL-307_125b 640 chr2L 16728872 16728949 chr2L 16729557 16729619 34 684 7.5 5.5 6.5 4.5 747 chr2L 16728872 intergenic not near genes chr2L 16729246 intergenic not near genes chr2L 16729619 intergenic CG31812 + chr2L_34_16725001 chr2L_16725001 RAL-307_125b 641 chr2L 16764934 16764996 chr2L 16765064 16765126 36 128 14.5 10.0 12.2 2.7 192 chr2L 16764934 intergenic not near genes chr2L 16765030 intergenic not near genes chr2L 16765126 intergenic not near genes chr2L_36_16765001 chr2L_16765001 RAL-307_125b 642 chr2L 16796358 16796437 chr2L 16796513 16796587 40 153 9.0 5.5 7.2 4.9 229 chr2L 16796358 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796472 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796587 intergenic Ugt36Bb + chr2L_40_16795001 chr2L_16795001 RAL-307_125b 643 chr2L 16804383 16804437 chr2L 16804519 16804547 24 134 8.5 9.0 8.8 2.4 164 chr2L 16804383 intron CG13280 - chr2L 16804465 intron CG13280 - chr2L 16804547 intron CG13280 - chr2L_24_16800001 chr2L_16800001 RAL-307_125b 644 chr2L 16852390 16852439 chr2L 16852518 16852567 23 125 23.5 2.0 12.8 1.7 177 chr2L 16852390 intergenic CG31810 - chr2L 16852478 intergenic CG31810 - chr2L 16852567 intergenic CG31810 - chr2L_23_16850001 chr2L_16850001 RAL-307_125b 645 chr2L 16866988 16867036 chr2L 16867133 16867181 22 145 0.0 13.0 6.5 2.9 193 chr2L 16866988 intergenic not near genes chr2L 16867084 intergenic not near genes chr2L 16867181 intergenic not near genes chr2L_22_16865001 chr2L_16865001 RAL-307_125b 646 chr2L 16880814 16880844 chr2L 16880946 16880976 11 132 7.0 9.0 8.0 1.2 162 chr2L 16880814 intron,intron CG31743 +,CG34313 + chr2L 16880895 intron,intron CG31743 +,CG34313 + chr2L 16880976 intron,intron CG31743 +,CG34313 + chr2L_11_16880001 chr2L_16880001 RAL-307_125b 647 chr2L 16939974 16939998 chr2L 16940102 16940119 5 127 8.0 14.0 11.0 0.4 145 chr2L 16939974 intergenic not near genes chr2L 16940046 intergenic not near genes chr2L 16940119 intergenic not near genes chr2L_5_16940001 chr2L_16940001 RAL-307_125b 648 chr2L 16958063 16958125 chr2L 16962901 16962963 Doc 24 4838 5.0 9.0 7.0 3.0 4900 chr2L 16958063 intergenic not near genes chr2L 16960513 intergenic not near genes chr2L 16962963 intergenic not near genes chr2L_24_16960001 chr2L_16960001 RAL-307_125b 649 chr2L 17032452 17032521 chr2L 17032587 17032656 27 134 5.5 8.0 6.8 3.5 204 chr2L 17032452 intergenic not near genes chr2L 17032554 intergenic not near genes chr2L 17032656 intergenic not near genes chr2L_27_17030001 chr2L_17030001 RAL-307_125b 650 chr2L 17050009 17050020 chr2L 17050116 17050157 4 129 8.0 4.0 6.0 0.6 148 chr2L 17050009 intergenic not near genes chr2L 17050083 intergenic not near genes chr2L 17050157 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-307_125b 651 chr2L 17050022 17050049 chr2L 17050112 17050158 4 107 4.0 4.0 4.0 0.8 136 chr2L 17050022 intergenic not near genes chr2L 17050090 intergenic not near genes chr2L 17050158 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-307_125b 652 chr2L 17056710 17056759 chr2L 17056840 17056889 12 130 4.0 0.0 2.0 4.0 179 chr2L 17056710 intergenic not near genes chr2L 17056800 intergenic not near genes chr2L 17056889 intergenic not near genes chr2L_12_17055001 chr2L_17055001 RAL-307_125b 653 chr2L 17058393 17058410 chr2L 17058596 17058613 10 203 16.5 11.5 14.0 0.7 220 chr2L 17058393 intergenic not near genes chr2L 17058503 intergenic not near genes chr2L 17058613 intergenic not near genes chr2L_10_17055001 chr2L_17055001 RAL-307_125b 654 chr2L 17070150 17070192 chr2L 17070296 17070338 10 145 14.0 4.0 9.0 1.0 188 chr2L 17070150 intergenic not near genes chr2L 17070244 intergenic not near genes chr2L 17070338 intergenic not near genes chr2L_10_17070001 chr2L_17070001 RAL-307_125b 655 chr2L 17070195 17070209 chr2L 17070295 17070355 12 142 10.0 4.0 7.0 1.5 160 chr2L 17070195 intergenic not near genes chr2L 17070275 intergenic not near genes chr2L 17070355 intergenic not near genes chr2L_12_17070001 chr2L_17070001 RAL-307_125b 656 chr2L 17082849 17082905 chr2L 17083261 17083317 26 412 10.5 9.5 10.0 2.4 468 chr2L 17082849 intergenic not near genes chr2L 17083083 intergenic not near genes chr2L 17083317 intergenic not near genes chr2L_26_17080001 chr2L_17080001 RAL-307_125b 657 chr2L 17087344 17087355 chr2L 17087507 17087523 4 167 16.5 14.0 15.2 0.2 179 chr2L 17087344 intergenic CG12620 + chr2L 17087434 intergenic CG12620 + chr2L 17087523 intergenic CG12620 + chr2L_4_17085001 chr2L_17085001 RAL-307_125b 658 chr2L 17087362 17087405 chr2L 17087503 17087573 21 161 6.0 13.0 9.5 2.0 211 chr2L 17087362 intergenic CG12620 + chr2L 17087468 intergenic CG12620 + chr2L 17087573 intergenic CG12620 + chr2L_21_17085001 chr2L_17085001 RAL-307_125b 659 chr2L 17089447 17089528 chr2L 17089691 17089754 20 239 0.5 5.0 2.8 5.3 307 chr2L 17089447 intergenic CG12620 + chr2L 17089600 intergenic CG12620 + chr2L 17089754 intergenic not near genes chr2L_20_17085001 chr2L_17085001 RAL-307_125b 660 chr2L 17101031 17101095 chr2L 17101510 17101575 20 480 60.0 46.5 53.2 0.4 544 chr2L 17101031 intergenic not near genes chr2L 17101303 intergenic not near genes chr2L 17101575 intergenic not near genes chr2L_20_17100001 chr2L_17100001 RAL-307_125b 661 chr2L 17108218 17108269 chr2L 17108391 17108432 15 172 8.0 9.5 8.8 1.5 214 chr2L 17108218 intergenic not near genes chr2L 17108325 intergenic not near genes chr2L 17108432 intergenic not near genes chr2L_15_17105001 chr2L_17105001 RAL-307_125b 662 chr2L 17144284 17144309 chr2L 17152002 17152027 opus 5 7717 17.5 4.5 11.0 0.4 7743 chr2L 17144284 intron,intron CG34106 +,beat-IIIa + chr2L 17148156 intron,intron CG34106 +,beat-IIIa + chr2L 17152027 intron,intron CG34106 +,beat-IIIa + chr2L_5_17145001 chr2L_17145001 RAL-307_125b 663 chr2L 17167533 17167592 chr2L 17167824 17167883 pogo 27 290 6.0 7.0 6.5 3.6 350 chr2L 17167533 intron,intron CG34106 +,beat-IIIa + chr2L 17167708 intron,intron CG34106 +,beat-IIIa + chr2L 17167883 intron,intron CG34106 +,beat-IIIa + chr2L_27_17165001 chr2L_17165001 RAL-307_125b 664 chr2L 17168147 17168164 chr2L 17168975 17168992 5 828 23.0 4.5 13.8 0.3 845 chr2L 17168147 intron,intron CG34106 +,beat-IIIa + chr2L 17168570 intron,intron CG34106 +,beat-IIIa + chr2L 17168992 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-307_125b 665 chr2L 17168165 17168223 chr2L 17168974 17169051 37 826 11.0 4.5 7.8 4.2 886 chr2L 17168165 intron,intron CG34106 +,beat-IIIa + chr2L 17168608 intron,intron CG34106 +,beat-IIIa + chr2L 17169051 intron,intron CG34106 +,beat-IIIa + chr2L_37_17165001 chr2L_17165001 RAL-307_125b 666 chr2L 17199118 17199183 chr2L 17200635 17200700 hobo 16 1517 10.5 2.5 6.5 2.1 1582 chr2L 17199118 intron beat-IIIc - chr2L 17199909 intron beat-IIIc - chr2L 17200700 intron beat-IIIc - chr2L_16_17195001 chr2L_17195001 RAL-307_125b 667 chr2L 17214945 17214977 chr2L 17215075 17215107 11 128 10.5 2.5 6.5 1.5 162 chr2L 17214945 intron beat-IIIc - chr2L 17215026 intron beat-IIIc - chr2L 17215107 intron beat-IIIc - chr2L_11_17215001 chr2L_17215001 RAL-307_125b 668 chr2L 17214979 17215010 chr2L 17215074 17215140 7 124 4.5 2.5 3.5 1.6 161 chr2L 17214979 intron beat-IIIc - chr2L 17215060 intron beat-IIIc - chr2L 17215140 intron beat-IIIc - chr2L_7_17215001 chr2L_17215001 RAL-307_125b 669 chr2L 17238797 17238860 chr2L 17238932 17238995 21 134 4.5 7.0 5.8 3.1 198 chr2L 17238797 intron beat-IIIc - chr2L 17238896 intron beat-IIIc - chr2L 17238995 intron beat-IIIc - chr2L_21_17235001 chr2L_17235001 RAL-307_125b 670 chr2L 17240521 17240593 chr2L 17240658 17240730 27 137 9.0 6.0 7.5 3.2 209 chr2L 17240521 intron beat-IIIc - chr2L 17240626 intron beat-IIIc - chr2L 17240730 intron beat-IIIc - chr2L_27_17240001 chr2L_17240001 RAL-307_125b 671 chr2L 17243899 17243935 chr2L 17244157 17244193 12 258 11.0 11.5 11.2 1.0 294 chr2L 17243899 intron beat-IIIc - chr2L 17244046 intron beat-IIIc - chr2L 17244193 intron beat-IIIc - chr2L_12_17240001 chr2L_17240001 RAL-307_125b 672 chr2L 17243938 17243945 chr2L 17244151 17244203 8 249 10.5 10.0 10.2 0.7 265 chr2L 17243938 intron beat-IIIc - chr2L 17244070 intron beat-IIIc - chr2L 17244203 intron beat-IIIc - chr2L_8_17240001 chr2L_17240001 RAL-307_125b 673 chr2L 17273150 17273212 chr2L 17277983 17278045 F-element 24 4826 9.5 6.5 8.0 2.7 4895 chr2L 17273150 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278045 intergenic not near genes chr2L_24_17275001 chr2L_17275001 RAL-307_125b 674 chr2L 17273213 17273222 chr2L 17277979 17277993 F-element 5 4804 6.5 6.0 6.2 0.7 4780 chr2L 17273213 intergenic not near genes chr2L 17275603 intergenic not near genes chr2L 17277993 intergenic not near genes chr2L_5_17275001 chr2L_17275001 RAL-307_125b 675 chr2L 17327872 17327924 chr2L 17328008 17328060 15 132 17.0 12.5 14.8 0.9 188 chr2L 17327872 intergenic not near genes chr2L 17327966 intergenic not near genes chr2L 17328060 intergenic not near genes chr2L_15_17325001 chr2L_17325001 RAL-307_125b 676 chr2L 17344828 17344900 chr2L 17344955 17345027 25 126 11.5 9.0 10.2 2.2 199 chr2L 17344828 intergenic not near genes chr2L 17344928 intergenic not near genes chr2L 17345027 intergenic not near genes chr2L_25_17340001 chr2L_17340001 RAL-307_125b 677 chr2L 17359984 17360051 chr2L 17360202 17360279 13 226 6.0 5.0 5.5 2.0 295 chr2L 17359984 intergenic not near genes chr2L 17360132 intergenic not near genes chr2L 17360279 intergenic not near genes chr2L_13_17360001 chr2L_17360001 RAL-307_125b 678 chr2L 17379668 17379673 chr2L 17379803 17379808 7 135 16.0 9.0 12.5 0.5 140 chr2L 17379668 intron Lrch - chr2L 17379738 intron Lrch - chr2L 17379808 intron Lrch - chr2L_7_17375001 chr2L_17375001 RAL-307_125b 679 chr2L 17379678 17379689 chr2L 17379802 17379824 5 133 10.5 9.0 9.8 0.5 146 chr2L 17379678 intron Lrch - chr2L 17379751 intron Lrch - chr2L 17379824 intron Lrch - chr2L_5_17375001 chr2L_17375001 RAL-307_125b 680 chr2L 17379690 17379705 chr2L 17379798 17379840 8 132 8.5 8.0 8.2 0.9 150 chr2L 17379690 intron Lrch - chr2L 17379765 intron Lrch - chr2L 17379840 intron Lrch - chr2L_8_17375001 chr2L_17375001 RAL-307_125b 681 chr2L 17431963 17432034 chr2L 17432124 17432192 1360 15 161 1.0 8.0 4.5 2.7 229 chr2L 17431963 intron Dif - chr2L 17432078 intron Dif - chr2L 17432192 intron Dif - chr2L_15_17430001 chr2L_17430001 RAL-307_125b 682 chr2L 17551288 17551315 chr2L 17551432 17551459 12 144 11.5 1.0 6.2 1.7 171 chr2L 17551288 intergenic not near genes chr2L 17551374 intergenic not near genes chr2L 17551459 intergenic not near genes chr2L_12_17550001 chr2L_17550001 RAL-307_125b 683 chr2L 17571148 17571159 chr2L 17571281 17571292 9 133 1.0 23.5 12.2 0.7 144 chr2L 17571148 intergenic not near genes chr2L 17571220 intergenic not near genes chr2L 17571292 intergenic not near genes chr2L_9_17570001 chr2L_17570001 RAL-307_125b 684 chr2L 17579850 17579907 chr2L 17579970 17580035 22 127 8.0 11.0 9.5 2.1 185 chr2L 17579850 5` UTR CR45698 + chr2L 17579942 5` UTR CR45698 + chr2L 17580035 intergenic CR45698 + chr2L_22_17575001 chr2L_17575001 RAL-307_125b 685 chr2L 17607441 17607450 chr2L 17607589 17607593 5 147 18.0 0.5 9.2 0.5 152 chr2L 17607441 intergenic CR44412 - chr2L 17607517 intergenic CR44412 - chr2L 17607593 intergenic CR44412 - chr2L_5_17605001 chr2L_17605001 RAL-307_125b 686 chr2L 17684964 17684973 chr2L 17685125 17685134 6 161 9.5 20.0 14.8 0.4 170 chr2L 17684964 intron CadN - chr2L 17685049 intron CadN - chr2L 17685134 intron CadN - chr2L_6_17685001 chr2L_17685001 RAL-307_125b 687 chr2L 17687472 17687523 chr2L 17692267 17692318 F-element 23 4793 10.5 7.0 8.8 2.3 4846 chr2L 17687472 intron CadN - chr2L 17689895 intron CadN - chr2L 17692318 intron CadN - chr2L_23_17685001 chr2L_17685001 RAL-307_125b 688 chr2L 17723747 17723797 chr2L 17723890 17723940 21 143 7.5 8.0 7.8 2.4 193 chr2L 17723747 intron CadN - chr2L 17723844 intron CadN - chr2L 17723940 intron CadN - chr2L_21_17720001 chr2L_17720001 RAL-307_125b 689 chr2L 17727819 17727880 chr2L 17729336 17729351 hobo 21 1508 10.0 14.5 12.2 1.6 1532 chr2L 17727819 intron CadN - chr2L 17728585 intron CadN - chr2L 17729351 intron CadN - chr2L_21_17725001 chr2L_17725001 RAL-307_125b 690 chr2L 17747961 17748025 chr2L 17748072 17748152 24 123 7.0 10.5 8.8 2.4 191 chr2L 17747961 intron CadN - chr2L 17748056 intron CadN - chr2L 17748152 intron CadN - chr2L_24_17745001 chr2L_17745001 RAL-307_125b 691 chr2L 17819878 17819940 chr2L 17825131 17825193 copia 23 5250 10.5 11.0 10.8 1.9 5315 chr2L 17819878 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825193 intron CadN2 - chr2L_23_17820001 chr2L_17820001 RAL-307_125b 692 chr2L 17867380 17867453 chr2L 17867716 17867789 20 334 6.5 6.5 6.5 2.7 409 chr2L 17867380 intron CadN2 - chr2L 17867584 intron CadN2 - chr2L 17867789 intron CadN2 - chr2L_20_17865001 chr2L_17865001 RAL-307_125b 693 chr2L 17879968 17879984 chr2L 17880105 17880121 4 137 10.0 9.0 9.5 0.4 153 chr2L 17879968 intergenic not near genes chr2L 17880044 intergenic not near genes chr2L 17880121 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-307_125b 694 chr2L 17879985 17880026 chr2L 17880101 17880163 9 130 4.0 8.0 6.0 1.3 178 chr2L 17879985 intergenic not near genes chr2L 17880074 intergenic not near genes chr2L 17880163 intergenic not near genes chr2L_9_17880001 chr2L_17880001 RAL-307_125b 695 chr2L 17880027 17880030 chr2L 17880100 17880131 5 115 4.0 8.0 6.0 0.7 104 chr2L 17880027 intergenic not near genes chr2L 17880079 intergenic not near genes chr2L 17880131 intergenic not near genes chr2L_5_17880001 chr2L_17880001 RAL-307_125b 696 chr2L 17911920 17911984 chr2L 17914148 17914212 pogo 18 2225 10.0 16.5 13.2 1.3 2292 chr2L 17911920 intergenic not near genes chr2L 17913066 intergenic not near genes chr2L 17914212 intergenic CG43271 - chr2L_18_17910001 chr2L_17910001 RAL-307_125b 697 chr2L 17935476 17935542 chr2L 17935773 17935839 26 296 0.0 4.5 2.2 8.1 363 chr2L 17935476 intergenic not near genes chr2L 17935658 intergenic not near genes chr2L 17935839 intergenic not near genes chr2L_26_17935001 chr2L_17935001 RAL-307_125b 698 chr2L 17944377 17944445 chr2L 17944590 17944658 32 209 12.0 7.0 9.5 3.0 281 chr2L 17944377 intergenic not near genes chr2L 17944518 intergenic not near genes chr2L 17944658 intergenic not near genes chr2L_32_17940001 chr2L_17940001 RAL-307_125b 699 chr2L 17951907 17951930 chr2L 17953424 17953447 hobo 14 1515 18.5 11.5 15.0 0.9 1540 chr2L 17951907 intergenic CR44398 -,CR44397 - chr2L 17952677 intergenic not near genes chr2L 17953447 intergenic not near genes chr2L_14_17950001 chr2L_17950001 RAL-307_125b 700 chr2L 17951932 17951975 chr2L 17953418 17953492 hobo 22 1514 9.5 11.0 10.2 2.0 1560 chr2L 17951932 intergenic CR44398 -,CR44397 - chr2L 17952712 intergenic not near genes chr2L 17953492 intergenic not near genes chr2L_22_17950001 chr2L_17950001 RAL-307_125b 701 chr2L 18051832 18051903 chr2L 18061029 18061079 roo 20 9192 12.5 11.0 11.8 1.6 9247 chr2L 18051832 intron rdo + chr2L 18056456 intron rdo + chr2L 18061079 intron rdo + chr2L_20_18055001 chr2L_18055001 RAL-307_125b 702 chr2L 18103012 18103040 chr2L 18103129 18103177 11 132 13.0 6.0 9.5 1.0 165 chr2L 18103012 intergenic not near genes chr2L 18103094 intergenic not near genes chr2L 18103177 intergenic not near genes chr2L_11_18100001 chr2L_18100001 RAL-307_125b 703 chr2L 18103043 18103072 chr2L 18103123 18103124 9 108 8.0 4.5 6.2 1.2 81 chr2L 18103043 intergenic not near genes chr2L 18103084 intergenic not near genes chr2L 18103124 intergenic not near genes chr2L_9_18100001 chr2L_18100001 RAL-307_125b 704 chr2L 18148785 18148849 chr2L 18148931 18148995 23 145 13.0 11.0 12.0 1.8 210 chr2L 18148785 intron Socs36E - chr2L 18148890 intron Socs36E - chr2L 18148995 intron Socs36E - chr2L_23_18145001 chr2L_18145001 RAL-307_125b 705 chr2L 18250519 18250534 chr2L 18250681 18250696 13 162 19.5 10.0 14.8 0.8 177 chr2L 18250519 intron CG42750 - chr2L 18250608 intron CG42750 - chr2L 18250696 intron CG42750 - chr2L_13_18250001 chr2L_18250001 RAL-307_125b 706 chr2L 18254178 18254243 chr2L 18254350 18254355 24 168 11.0 12.0 11.5 1.9 177 chr2L 18254178 intron CG42750 - chr2L 18254266 intron CG42750 - chr2L 18254355 intron CG42750 - chr2L_24_18250001 chr2L_18250001 RAL-307_125b 707 chr2L 18254769 18254836 chr2L 18254919 18254986 39 148 9.5 9.5 9.5 3.7 217 chr2L 18254769 intron CG42750 - chr2L 18254878 intron CG42750 - chr2L 18254986 intron CG42750 - chr2L_39_18250001 chr2L_18250001 RAL-307_125b 708 chr2L 18264023 18264089 chr2L 18264140 18264186 28 125 10.5 13.5 12.0 2.2 163 chr2L 18264023 intron CG42750 - chr2L 18264104 intron CG42750 - chr2L 18264186 intron CG42750 - chr2L_28_18260001 chr2L_18260001 RAL-307_125b 709 chr2L 18273994 18274063 chr2L 18274130 18274199 28 134 10.5 4.5 7.5 3.3 205 chr2L 18273994 intron CG42750 - chr2L 18274096 intron CG42750 - chr2L 18274199 intron CG42750 - chr2L_28_18270001 chr2L_18270001 RAL-307_125b 710 chr2L 18300241 18300260 chr2L 18300353 18300356 5 109 4.0 9.0 6.5 0.7 115 chr2L 18300241 intergenic not near genes chr2L 18300298 intergenic not near genes chr2L 18300356 intergenic not near genes chr2L_5_18300001 chr2L_18300001 RAL-307_125b 711 chr2L 18303925 18304001 chr2L 18304066 18304142 33 139 6.5 9.0 7.8 3.7 217 chr2L 18303925 intergenic not near genes chr2L 18304034 intergenic not near genes chr2L 18304142 intergenic not near genes chr2L_33_18300001 chr2L_18300001 RAL-307_125b 712 chr2L 18338521 18338599 chr2L 18338675 18338722 18 151 8.0 6.5 7.2 2.2 201 chr2L 18338521 intron Fas3 + chr2L 18338622 intron Fas3 + chr2L 18338722 intron Fas3 + chr2L_18_18335001 chr2L_18335001 RAL-307_125b 713 chr2L 18344802 18344812 chr2L 18344916 18344933 4 118 2.0 13.5 7.8 0.5 131 chr2L 18344802 intron Fas3 + chr2L 18344868 intron Fas3 + chr2L 18344933 intron Fas3 + chr2L_4_18340001 chr2L_18340001 RAL-307_125b 714 chr2L 18350608 18350682 chr2L 18350745 18350819 34 136 11.5 10.5 11.0 2.8 211 chr2L 18350608 intron Fas3 + chr2L 18350714 intron Fas3 + chr2L 18350819 intron Fas3 + chr2L_34_18350001 chr2L_18350001 RAL-307_125b 715 chr2L 18407989 18408043 chr2L 18412823 18412877 Doc 28 4831 19.0 14.0 16.5 1.6 4888 chr2L 18407989 intergenic not near genes chr2L 18410433 intergenic not near genes chr2L 18412877 intergenic not near genes chr2L_28_18410001 chr2L_18410001 RAL-307_125b 716 chr2L 18535735 18535764 chr2L 18535848 18535901 8 134 1.0 0.5 0.8 4.4 166 chr2L 18535735 intron Pde11 - chr2L 18535818 intron Pde11 - chr2L 18535901 intron Pde11 - chr2L_8_18535001 chr2L_18535001 RAL-307_125b 717 chr2L 18561505 18561574 chr2L 18561656 18561725 34 151 5.5 7.0 6.2 4.7 220 chr2L 18561505 intron Pde11 - chr2L 18561615 intron Pde11 - chr2L 18561725 intron Pde11 - chr2L_34_18560001 chr2L_18560001 RAL-307_125b 718 chr2L 18811368 18811431 chr2L 18811500 18811562 34 132 7.0 3.5 5.2 5.5 194 chr2L 18811368 intergenic CG10570 -,CG42502 - chr2L 18811465 intergenic CG10570 -,CG42502 - chr2L 18811562 intergenic not near genes chr2L_34_18810001 chr2L_18810001 RAL-307_125b 719 chr2L 18811618 18811689 chr2L 18811876 18811948 50 257 12.5 13.5 13.0 3.6 330 chr2L 18811618 intergenic not near genes chr2L 18811783 intergenic not near genes chr2L 18811948 intergenic not near genes chr2L_50_18810001 chr2L_18810001 RAL-307_125b 720 chr2L 18812518 18812532 chr2L 18812831 18812845 8 312 1.0 8.5 4.8 1.4 327 chr2L 18812518 intergenic CG17325 +,CG42305 + chr2L 18812682 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812845 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_8_18810001 chr2L_18810001 RAL-307_125b 721 chr2L 18812533 18812582 chr2L 18812819 18812895 18 310 1.0 5.0 3.0 4.5 362 chr2L 18812533 intergenic CG17325 +,CG42305 + chr2L 18812714 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812895 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_18_18810001 chr2L_18810001 RAL-307_125b 722 chr2L 18899181 18899195 chr2L 18899608 18899622 5 424 11.5 6.5 9.0 0.5 441 chr2L 18899181 intergenic CR44739 - chr2L 18899402 intergenic CR44739 - chr2L 18899622 3` UTR CR44739 - chr2L_5_18895001 chr2L_18895001 RAL-307_125b 723 chr2L 18899200 18899213 chr2L 18899601 18899638 4 411 7.0 6.0 6.5 0.5 438 chr2L 18899200 intergenic CR44739 - chr2L 18899419 intergenic CR44739 - chr2L 18899638 3` UTR CR44739 - chr2L_4_18895001 chr2L_18895001 RAL-307_125b 724 chr2L 18899218 18899242 chr2L 18899600 18899626 6 398 3.0 6.0 4.5 1.1 408 chr2L 18899218 intergenic CR44739 - chr2L 18899422 intergenic CR44739 - chr2L 18899626 3` UTR CR44739 - chr2L_6_18895001 chr2L_18895001 RAL-307_125b 725 chr2L 18902577 18902645 chr2L 18902908 18902976 38 330 12.0 7.0 9.5 3.6 399 chr2L 18902577 intergenic not near genes chr2L 18902776 intergenic not near genes chr2L 18902976 intergenic not near genes chr2L_38_18900001 chr2L_18900001 RAL-307_125b 726 chr2L 18962180 18962261 chr2L 18962325 18962391 16 142 0.0 10.0 5.0 2.7 211 chr2L 18962180 intron Nak - chr2L 18962286 intron Nak - chr2L 18962391 intron Nak - chr2L_16_18960001 chr2L_18960001 RAL-307_125b 727 chr2L 19016193 19016275 chr2L 19016339 19016340 43 142 9.0 8.0 8.5 4.5 147 chr2L 19016193 intergenic not near genes chr2L 19016266 intergenic not near genes chr2L 19016340 intergenic not near genes chr2L_43_19015001 chr2L_19015001 RAL-307_125b 728 chr2L 19035871 19035946 chr2L 19036011 19036032 23 133 8.5 10.0 9.2 2.3 161 chr2L 19035871 intron mib2 + chr2L 19035952 intron mib2 + chr2L 19036032 intron mib2 + chr2L_23_19035001 chr2L_19035001 RAL-307_125b 729 chr2L 19043266 19043333 chr2L 19043407 19043475 28 142 8.5 9.5 9.0 2.8 209 chr2L 19043266 exon Catsup + chr2L 19043370 3` UTR Catsup + chr2L 19043475 3` UTR Catsup + chr2L_28_19040001 chr2L_19040001 RAL-307_125b 730 chr2L 19121011 19121071 chr2L 19121139 19121200 19 125 7.5 2.5 5.0 3.2 189 chr2L 19121011 intergenic l(2)37Cc - chr2L 19121106 intergenic l(2)37Cc - chr2L 19121200 intergenic l(2)37Cc - chr2L_19_19120001 chr2L_19120001 RAL-307_125b 731 chr2L 19145158 19145184 chr2L 19145271 19145273 4 115 15.0 6.5 10.8 0.3 115 chr2L 19145158 intron brat + chr2L 19145216 intron brat + chr2L 19145273 intron brat + chr2L_4_19145001 chr2L_19145001 RAL-307_125b 732 chr2L 19147256 19147384 chr2L 19154403 19154469 297 24 7138 0.0 11.5 5.8 3.5 7213 chr2L 19147256 intron brat + chr2L 19150862 intron brat + chr2L 19154469 intron brat + chr2L_24_19150001 chr2L_19150001 RAL-307_125b 733 chr2L 19178809 19178824 chr2L 19178936 19178951 12 126 19.5 22.0 20.8 0.6 142 chr2L 19178809 3` UTR brat + chr2L 19178880 3` UTR brat + chr2L 19178951 3` UTR brat + chr2L_12_19175001 chr2L_19175001 RAL-307_125b 734 chr2L 19217830 19217902 chr2L 19217964 19218037 16 131 4.5 0.0 2.2 5.0 207 chr2L 19217830 5` UTR CR44189 + chr2L 19217934 5` UTR CR44189 + chr2L 19218037 5` UTR CR44189 + chr2L_16_19215001 chr2L_19215001 RAL-307_125b 735 chr2L 19220068 19220129 chr2L 19220238 19220254 24 166 13.0 14.0 13.5 1.7 186 chr2L 19220068 intergenic not near genes chr2L 19220161 intergenic not near genes chr2L 19220254 intergenic not near genes chr2L_24_19220001 chr2L_19220001 RAL-307_125b 736 chr2L 19246778 19246848 chr2L 19246908 19246978 32 129 9.0 12.5 10.8 2.7 200 chr2L 19246778 intergenic not near genes chr2L 19246878 intergenic not near genes chr2L 19246978 intergenic not near genes chr2L_32_19245001 chr2L_19245001 RAL-307_125b 737 chr2L 19331651 19331695 chr2L 19331742 19331824 16 116 5.5 7.5 6.5 2.1 173 chr2L 19331651 intergenic not near genes chr2L 19331738 intergenic not near genes chr2L 19331824 intergenic not near genes chr2L_16_19330001 chr2L_19330001 RAL-307_125b 738 chr2L 19344998 19345031 chr2L 19357236 19357274 blood 15 12253 15.0 13.5 14.2 1.0 12276 chr2L 19344998 intron dnt - chr2L 19351136 intron dnt - chr2L 19357274 intron dnt - chr2L_15_19350001 chr2L_19350001 RAL-307_125b 739 chr2L 19357496 19357567 chr2L 19357636 19357691 32 136 11.5 11.5 11.5 2.6 195 chr2L 19357496 intron dnt - chr2L 19357594 intron dnt - chr2L 19357691 intron dnt - chr2L_32_19355001 chr2L_19355001 RAL-307_125b 740 chr2L 19364854 19364925 chr2L 19365097 19365167 7 243 7.5 5.0 6.2 1.0 313 chr2L 19364854 intron CG13086 + chr2L 19365010 exon CG13086 + chr2L 19365167 exon CG13086 + chr2L_7_19365001 chr2L_19365001 RAL-307_125b 741 chr2L 19375420 19375500 chr2L 19375552 19375631 31 131 6.5 11.0 8.8 3.2 211 chr2L 19375420 intergenic not near genes chr2L 19375526 intergenic not near genes chr2L 19375631 intergenic not near genes chr2L_31_19375001 chr2L_19375001 RAL-307_125b 742 chr2L 19405568 19405638 chr2L 19405708 19405758 27 139 7.0 7.0 7.0 3.4 190 chr2L 19405568 intron Pax - chr2L 19405663 intron Pax - chr2L 19405758 intron Pax - chr2L_27_19405001 chr2L_19405001 RAL-307_125b 743 chr2L 19544581 19544588 chr2L 19544673 19544698 4 100 12.5 12.5 12.5 0.3 117 chr2L 19544581 exon ref(2)P + chr2L 19544640 exon ref(2)P + chr2L 19544698 exon ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-307_125b 744 chr2L 19544592 19544613 chr2L 19544664 19544710 7 93 10.5 12.0 11.2 0.6 118 chr2L 19544592 exon ref(2)P + chr2L 19544651 exon ref(2)P + chr2L 19544710 exon ref(2)P + chr2L_7_19540001 chr2L_19540001 RAL-307_125b 745 chr2L 19557775 19557981 chr2L 19557917 19558111 21 136 3.0 1.5 2.2 6.6 336 chr2L 19557775 intergenic Tep5 + chr2L 19557943 intergenic Tep5 + chr2L 19558111 exon Tep5 + chr2L_21_19555001 chr2L_19555001 RAL-307_125b 746 chr2L 19558488 19558532 chr2L 19558631 19558686 22 153 1.0 9.5 5.2 3.5 198 chr2L 19558488 intron Tep5 + chr2L 19558587 intron Tep5 + chr2L 19558686 intron Tep5 + chr2L_22_19555001 chr2L_19555001 RAL-307_125b 747 chr2L 19559953 19560039 chr2L 19560256 19560327 42 298 12.0 10.5 11.2 3.4 374 chr2L 19559953 exon Tep5 + chr2L 19560140 exon Tep5 + chr2L 19560327 intron Tep5 + chr2L_42_19560001 chr2L_19560001 RAL-307_125b 748 chr2L 19560796 19560862 chr2L 19560926 19561007 28 134 12.0 0.0 6.0 4.0 211 chr2L 19560796 exon Tep5 + chr2L 19560902 exon Tep5 + chr2L 19561007 exon Tep5 + chr2L_28_19560001 chr2L_19560001 RAL-307_125b 749 chr2L 19561290 19561366 chr2L 19561483 19561557 39 189 10.5 12.0 11.2 3.2 267 chr2L 19561290 exon Tep5 + chr2L 19561424 exon Tep5 + chr2L 19561557 exon Tep5 + chr2L_39_19560001 chr2L_19560001 RAL-307_125b 750 chr2L 19562477 19562559 chr2L 19562608 19562689 22 129 0.5 5.0 2.8 5.8 212 chr2L 19562477 exon Tep5 + chr2L 19562583 intron Tep5 + chr2L 19562689 exon Tep5 + chr2L_22_19560001 chr2L_19560001 RAL-307_125b 751 chr2L 19608563 19608605 chr2L 19608699 19608746 23 140 12.0 14.0 13.0 1.6 183 chr2L 19608563 intron Lar + chr2L 19608654 intron Lar + chr2L 19608746 intron Lar + chr2L_23_19605001 chr2L_19605001 RAL-307_125b 752 chr2L 19620053 19620120 chr2L 19621092 19621144 jockey 18 1032 9.5 5.0 7.2 2.2 1091 chr2L 19620053 intron Lar + chr2L 19620598 intron Lar + chr2L 19621144 intron Lar + chr2L_18_19620001 chr2L_19620001 RAL-307_125b 753 chr2L 19638492 19638560 chr2L 19638628 19638698 31 137 15.0 13.0 14.0 2.1 206 chr2L 19638492 intron Lar + chr2L 19638595 intron Lar + chr2L 19638698 intron Lar + chr2L_31_19635001 chr2L_19635001 RAL-307_125b 754 chr2L 19644083 19644133 chr2L 19644199 19644259 15 118 9.0 5.5 7.2 1.8 176 chr2L 19644083 intron Lar + chr2L 19644171 intron Lar + chr2L 19644259 intron Lar + chr2L_15_19640001 chr2L_19640001 RAL-307_125b 755 chr2L 19652519 19652599 chr2L 19674005 19674082 opus 36 21484 6.5 6.5 6.5 4.8 21563 chr2L 19652519 intron Lar + chr2L 19663300 intron Lar + chr2L 19674082 intron Lar + chr2L_36_19660001 chr2L_19660001 RAL-307_125b 756 chr2L 19703501 19703514 chr2L 19712687 19712700 roo 4 9186 28.0 14.5 21.2 0.2 9199 chr2L 19703501 intron Lar + chr2L 19708100 intron Lar + chr2L 19712700 intron Lar + chr2L_4_19705001 chr2L_19705001 RAL-307_125b 757 chr2L 19703517 19703560 chr2L 19712678 19712746 roo 26 9182 12.5 13.5 13.0 1.9 9229 chr2L 19703517 intron Lar + chr2L 19708132 intron Lar + chr2L 19712746 intron Lar + chr2L_26_19705001 chr2L_19705001 RAL-307_125b 758 chr2L 19718357 19718405 chr2L 19718483 19718496 17 124 11.0 0.5 5.8 2.5 139 chr2L 19718357 intron Lar + chr2L 19718426 intron Lar + chr2L 19718496 intron Lar + chr2L_17_19715001 chr2L_19715001 RAL-307_125b 759 chr2L 19762762 19762819 chr2L 19763054 19763111 pogo 21 291 8.5 9.5 9.0 2.1 349 chr2L 19762762 exon fbp - chr2L 19762936 intron fbp - chr2L 19763111 intron fbp - chr2L_21_19760001 chr2L_19760001 RAL-307_125b 760 chr2L 19776615 19776659 chr2L 19776745 19776789 22 130 23.0 16.5 19.8 1.1 174 chr2L 19776615 3` UTR CdGAPr - chr2L 19776702 3` UTR CdGAPr - chr2L 19776789 3` UTR CdGAPr - chr2L_22_19775001 chr2L_19775001 RAL-307_125b 761 chr2L 19806646 19806693 chr2L 19806775 19806775 5 114 20.0 4.0 12.0 0.4 129 chr2L 19806646 intron sick + chr2L 19806710 intron sick + chr2L 19806775 intron sick + chr2L_5_19805001 chr2L_19805001 RAL-307_125b 762 chr2L 19824362 19824427 chr2L 19824495 19824559 28 131 5.5 10.0 7.8 3.2 197 chr2L 19824362 intron sick + chr2L 19824460 intron sick + chr2L 19824559 intron sick + chr2L_28_19820001 chr2L_19820001 RAL-307_125b 763 chr2L 19837244 19837304 chr2L 19837360 19837432 17 127 8.5 7.5 8.0 1.9 188 chr2L 19837244 intron sick + chr2L 19837338 intron sick + chr2L 19837432 intron sick + chr2L_17_19835001 chr2L_19835001 RAL-307_125b 764 chr2L 19913015 19913064 chr2L 19913511 19913560 37 494 13.0 0.0 6.5 4.9 545 chr2L 19913015 intron,3` UTR sick +,Victoria - chr2L 19913288 intron,exon sick +,Victoria - chr2L 19913560 intron sick + chr2L_37_19910001 chr2L_19910001 RAL-307_125b 765 chr2L 19947641 19947674 chr2L 19947768 19947807 6 131 11.5 6.0 8.8 0.6 166 chr2L 19947641 intron sick + chr2L 19947724 intron sick + chr2L 19947807 intron sick + chr2L_6_19945001 chr2L_19945001 RAL-307_125b 766 chr2L 19994633 19994676 chr2L 19994729 19994753 19 114 6.0 9.0 7.5 2.2 120 chr2L 19994633 intron CG43861 - chr2L 19994693 intron CG43861 - chr2L 19994753 intron CG43861 - chr2L_19_19990001 chr2L_19990001 RAL-307_125b 767 chr2L 20005832 20005856 chr2L 20010958 20010982 flea 12 5125 24.0 16.5 20.2 0.6 5150 chr2L 20005832 intron CG43861 - chr2L 20008407 intron CG43861 - chr2L 20010982 intron CG43861 - chr2L_12_20005001 chr2L_20005001 RAL-307_125b 768 chr2L 20005859 20005894 chr2L 20010957 20011020 flea 15 5122 12.0 16.0 14.0 1.0 5161 chr2L 20005859 intron CG43861 - chr2L 20008440 intron CG43861 - chr2L 20011020 intron CG43861 - chr2L_15_20005001 chr2L_20005001 RAL-307_125b 769 chr2L 20015910 20015936 chr2L 20016078 20016109 16 171 14.5 11.5 13.0 1.1 199 chr2L 20015910 intron CG43861 - chr2L 20016010 intron CG43861 - chr2L 20016109 intron CG43861 - chr2L_16_20015001 chr2L_20015001 RAL-307_125b 770 chr2L 20015938 20015978 chr2L 20016075 20016142 28 166 5.0 9.0 7.0 3.5 204 chr2L 20015938 intron CG43861 - chr2L 20016040 intron CG43861 - chr2L 20016142 intron CG43861 - chr2L_28_20015001 chr2L_20015001 RAL-307_125b 771 chr2L 20041379 20041454 chr2L 20041514 20041589 24 126 7.5 5.5 6.5 3.2 210 chr2L 20041379 intron sNPF + chr2L 20041484 intron sNPF + chr2L 20041589 intron sNPF + chr2L_24_20040001 chr2L_20040001 RAL-307_125b 772 chr2L 20057003 20057049 chr2L 20057130 20057176 20 123 18.5 6.5 12.5 1.5 173 chr2L 20057003 intergenic not near genes chr2L 20057090 intergenic not near genes chr2L 20057176 intergenic not near genes chr2L_20_20055001 chr2L_20055001 RAL-307_125b 773 chr2L 20057055 20057060 chr2L 20057159 20057187 7 124 16.5 15.5 16.0 0.4 132 chr2L 20057055 intergenic not near genes chr2L 20057121 intergenic not near genes chr2L 20057187 intergenic not near genes chr2L_7_20055001 chr2L_20055001 RAL-307_125b 774 chr2L 20057064 20057078 chr2L 20057131 20057204 12 120 12.0 7.0 9.5 1.1 140 chr2L 20057064 intergenic not near genes chr2L 20057134 intergenic not near genes chr2L 20057204 intergenic not near genes chr2L_12_20055001 chr2L_20055001 RAL-307_125b 775 chr2L 20119477 20119510 chr2L 20119597 20119632 10 118 9.0 18.0 13.5 0.7 155 chr2L 20119477 intergenic not near genes chr2L 20119554 intergenic not near genes chr2L 20119632 intergenic not near genes chr2L_10_20115001 chr2L_20115001 RAL-307_125b 776 chr2L 20225587 20225616 chr2L 20225715 20225743 12 128 8.0 11.5 9.8 1.1 156 chr2L 20225587 intergenic not near genes chr2L 20225665 intergenic not near genes chr2L 20225743 intergenic not near genes chr2L_12_20225001 chr2L_20225001 RAL-307_125b 777 chr2L 20272075 20272096 chr2L 20282836 20282857 copia 19 10761 18.5 10.5 14.5 1.2 10782 chr2L 20272075 intergenic not near genes chr2L 20277466 intergenic not near genes chr2L 20282857 intergenic not near genes chr2L_19_20275001 chr2L_20275001 RAL-307_125b 778 chr2L 20272099 20272135 chr2L 20282835 20282896 copia 21 10759 9.5 10.0 9.8 1.9 10797 chr2L 20272099 intergenic not near genes chr2L 20277498 intergenic not near genes chr2L 20282896 intergenic not near genes chr2L_21_20275001 chr2L_20275001 RAL-307_125b 779 chr2L 20296486 20296537 chr2L 20296617 20296651 22 129 0.5 5.5 3.0 5.5 165 chr2L 20296486 intergenic CR43414 - chr2L 20296568 intergenic CR43414 - chr2L 20296651 3` UTR CR43414 - chr2L_22_20295001 chr2L_20295001 RAL-307_125b 780 chr2L 20303121 20303178 chr2L 20310639 20310696 blood 31 7518 10.0 11.0 10.5 2.7 7575 chr2L 20303121 intergenic not near genes chr2L 20306908 intergenic not near genes chr2L 20310696 intergenic not near genes chr2L_31_20305001 chr2L_20305001 RAL-307_125b 781 chr2L 20310836 20310878 chr2L 20310965 20311007 9 129 13.5 10.5 12.0 0.7 171 chr2L 20310836 intergenic spir + chr2L 20310922 intergenic spir + chr2L 20311007 intergenic spir + chr2L_9_20310001 chr2L_20310001 RAL-307_125b 782 chr2L 20310879 20310916 chr2L 20310963 20311010 15 115 8.0 10.0 9.0 1.5 131 chr2L 20310879 intergenic spir + chr2L 20310944 intergenic spir + chr2L 20311010 intergenic spir + chr2L_15_20310001 chr2L_20310001 RAL-307_125b 783 chr2L 20372168 20372224 chr2L 20372468 20372524 pogo 31 299 13.0 10.0 11.5 2.5 356 chr2L 20372168 intergenic Ugt37a1 - chr2L 20372346 intergenic Ugt37a1 - chr2L 20372524 exon Ugt37a1 - chr2L_31_20370001 chr2L_20370001 RAL-307_125b 784 chr2L 20474375 20474432 chr2L 20474845 20474902 22 468 10.0 3.0 6.5 2.9 527 chr2L 20474375 intron CR44980 - chr2L 20474638 intron CR44980 - chr2L 20474902 intron CR44980 - chr2L_22_20470001 chr2L_20470001 RAL-307_125b 785 chr2L 20498646 20498664 chr2L 20498790 20498813 9 148 17.0 5.0 11.0 0.8 167 chr2L 20498646 intergenic not near genes chr2L 20498730 intergenic not near genes chr2L 20498813 intergenic not near genes chr2L_9_20495001 chr2L_20495001 RAL-307_125b 786 chr2L 20498666 20498704 chr2L 20498789 20498834 17 146 9.0 5.0 7.0 2.1 168 chr2L 20498666 intergenic not near genes chr2L 20498750 intergenic not near genes chr2L 20498834 intergenic not near genes chr2L_17_20495001 chr2L_20495001 RAL-307_125b 787 chr2L 20524139 20524165 chr2L 20524271 20524296 6 132 16.0 0.0 8.0 0.7 157 chr2L 20524139 intergenic not near genes chr2L 20524218 intergenic not near genes chr2L 20524296 intergenic not near genes chr2L_6_20520001 chr2L_20520001 RAL-307_125b 788 chr2L 20533809 20533856 chr2L 20533936 20533983 16 126 6.5 5.0 5.8 2.4 174 chr2L 20533809 intergenic not near genes chr2L 20533896 intergenic not near genes chr2L 20533983 intergenic not near genes chr2L_16_20530001 chr2L_20530001 RAL-307_125b 789 chr2L 20550582 20550618 chr2L 20550718 20550754 18 134 12.0 12.0 12.0 1.4 172 chr2L 20550582 intergenic not near genes chr2L 20550668 intergenic not near genes chr2L 20550754 intergenic not near genes chr2L_18_20550001 chr2L_20550001 RAL-307_125b 790 chr2L 20553143 20553204 chr2L 20553269 20553328 22 126 11.0 13.0 12.0 1.7 185 chr2L 20553143 intergenic not near genes chr2L 20553236 intergenic not near genes chr2L 20553328 intergenic not near genes chr2L_22_20550001 chr2L_20550001 RAL-307_125b 791 chr2L 20568612 20568685 chr2L 20569052 20569125 X-element 23 438 10.5 4.5 7.5 2.7 513 chr2L 20568612 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569125 intron CR45347 + chr2L_23_20565001 chr2L_20565001 RAL-307_125b 792 chr2L 20572929 20572961 chr2L 20573058 20573094 19 133 19.0 9.5 14.2 1.2 165 chr2L 20572929 intron CR45347 + chr2L 20573012 intron CR45347 + chr2L 20573094 intron CR45347 + chr2L_19_20570001 chr2L_20570001 RAL-307_125b 793 chr2L 20572963 20572993 chr2L 20573056 20573122 16 123 8.5 9.0 8.8 1.6 159 chr2L 20572963 intron CR45347 + chr2L 20573042 intron CR45347 + chr2L 20573122 intron CR45347 + chr2L_16_20570001 chr2L_20570001 RAL-307_125b 794 chr2L 20576177 20576201 chr2L 20583695 20583719 blood 11 7516 16.0 7.0 11.5 0.9 7542 chr2L 20576177 intergenic CR45347 + chr2L 20579948 intergenic not near genes chr2L 20583719 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-307_125b 795 chr2L 20576204 20576248 chr2L 20583692 20583761 blood 12 7514 5.0 7.0 6.0 1.7 7557 chr2L 20576204 intergenic CR45347 + chr2L 20579982 intergenic not near genes chr2L 20583761 3` UTR CR44909 - chr2L_12_20575001 chr2L_20575001 RAL-307_125b 796 chr2L 20589449 20589463 chr2L 20589576 20589590 8 127 32.0 8.0 20.0 0.4 141 chr2L 20589449 intron CR44909 - chr2L 20589520 intron CR44909 - chr2L 20589590 intron CR44909 - chr2L_8_20585001 chr2L_20585001 RAL-307_125b 797 chr2L 20589472 20589522 chr2L 20589574 20589649 18 119 17.5 8.5 13.0 1.3 177 chr2L 20589472 intron CR44909 - chr2L 20589560 intron CR44909 - chr2L 20589649 intron CR44909 - chr2L_18_20585001 chr2L_20585001 RAL-307_125b 798 chr2L 20597061 20597091 chr2L 20597163 20597186 8 113 7.5 8.5 8.0 0.9 125 chr2L 20597061 intron CR44909 - chr2L 20597124 intron CR44909 - chr2L 20597186 intron CR44909 - chr2L_8_20595001 chr2L_20595001 RAL-307_125b 799 chr2L 20607609 20607668 chr2L 20607716 20607730 15 107 3.5 5.0 4.2 2.9 121 chr2L 20607609 intron,3` UTR CR44909 -,CR43608 - chr2L 20607670 intron,3` UTR CR44909 -,CR43608 - chr2L 20607730 intron,3` UTR CR44909 -,CR43608 - chr2L_15_20605001 chr2L_20605001 RAL-307_125b 800 chr2L 20638367 20638403 chr2L 20638495 20638531 6 134 8.5 11.0 9.8 0.6 164 chr2L 20638367 intergenic not near genes chr2L 20638449 intergenic not near genes chr2L 20638531 intergenic not near genes chr2L_6_20635001 chr2L_20635001 RAL-307_125b 801 chr2L 20668670 20668703 chr2L 20668796 20668829 19 125 10.0 19.0 14.5 1.2 159 chr2L 20668670 intron CG31678 - chr2L 20668750 intron CG31678 - chr2L 20668829 intron CG31678 - chr2L_19_20665001 chr2L_20665001 RAL-307_125b 802 chr2L 20674783 20674862 chr2L 20674918 20674990 10 127 4.0 1.0 2.5 2.9 207 chr2L 20674783 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674990 intron CG31678 - chr2L_10_20670001 chr2L_20670001 RAL-307_125b 803 chr2L 20695754 20695824 chr2L 20695884 20695962 24 137 7.5 8.0 7.8 2.7 208 chr2L 20695754 intron Hr38 - chr2L 20695858 intron Hr38 - chr2L 20695962 intron Hr38 - chr2L_24_20695001 chr2L_20695001 RAL-307_125b 804 chr2L 20780947 20781024 chr2L 20781106 20781146 19 140 7.0 9.0 8.0 2.1 199 chr2L 20780947 intron cad + chr2L 20781046 intron cad + chr2L 20781146 intron cad + chr2L_19_20780001 chr2L_20780001 RAL-307_125b 805 chr2L 20818462 20818541 chr2L 20818593 20818673 22 129 10.0 12.5 11.2 1.8 211 chr2L 20818462 exon CheB38a - chr2L 20818568 intergenic CheB38a - chr2L 20818673 intergenic CheB38a - chr2L_22_20815001 chr2L_20815001 RAL-307_125b 806 chr2L 20835763 20835836 chr2L 20836529 20836598 Quasimodo 32 766 10.0 11.5 10.8 2.7 835 chr2L 20835763 5` UTR Oseg5 - chr2L 20836180 intergenic Oseg5 -,Spn38F - chr2L 20836598 intergenic Spn38F - chr2L_32_20835001 chr2L_20835001 RAL-307_125b 807 chr2L 20839664 20839734 chr2L 20839790 20839860 28 126 11.0 12.5 11.8 2.2 196 chr2L 20839664 intergenic not near genes chr2L 20839762 intergenic not near genes chr2L 20839860 intergenic not near genes chr2L_28_20835001 chr2L_20835001 RAL-307_125b 808 chr2L 20891484 20891543 chr2L 20896635 20896694 jockey 16 5149 11.0 13.5 12.2 1.2 5210 chr2L 20891484 intron,intron CG43739 -,sky - chr2L 20894089 intron,intron CG43739 -,sky - chr2L 20896694 intron,intron CG43739 -,sky - chr2L_16_20890001 chr2L_20890001 RAL-307_125b 809 chr2L 20901482 20901490 chr2L 20902698 20902703 1360 5 1214 0.0 6.5 3.2 1.2 1221 chr2L 20901482 intron,intron CG43739 -,sky - chr2L 20902092 intron,intron CG43739 -,sky - chr2L 20902703 intron,intron CG43739 -,sky - chr2L_5_20900001 chr2L_20900001 RAL-307_125b 810 chr2L 20927269 20927307 chr2L 20927484 20927561 11 226 37.5 54.0 45.8 0.2 292 chr2L 20927269 exon CG9272 - chr2L 20927415 exon CG9272 - chr2L 20927561 exon CG9272 - chr2L_11_20925001 chr2L_20925001 RAL-307_125b 811 chr2L 20946894 20946962 chr2L 20947031 20947099 33 133 8.5 8.0 8.2 3.6 205 chr2L 20946894 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947099 intergenic CR44606 - chr2L_33_20945001 chr2L_20945001 RAL-307_125b 812 chr2L 20967035 20967045 chr2L 20967171 20967181 6 135 6.5 6.5 6.5 0.8 146 chr2L 20967035 3` UTR CG42238 - chr2L 20967108 3` UTR CG42238 - chr2L 20967181 3` UTR CG42238 - chr2L_6_20965001 chr2L_20965001 RAL-307_125b 813 chr2L 20967049 20967107 chr2L 20967168 20967243 19 133 1.0 6.5 3.8 4.0 194 chr2L 20967049 3` UTR CG42238 - chr2L 20967146 3` UTR CG42238 - chr2L 20967243 3` UTR CG42238 - chr2L_19_20965001 chr2L_20965001 RAL-307_125b 814 chr2L 20976606 20976663 chr2L 20981471 20981528 X-element 31 4863 12.0 16.0 14.0 2.1 4922 chr2L 20976606 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981528 intron CG42238 - chr2L_31_20975001 chr2L_20975001 RAL-307_125b 815 chr2L 21019287 21019357 chr2L 21019458 21019513 28 168 7.5 0.0 3.8 5.8 226 chr2L 21019287 intron CG42238 - chr2L 21019400 intron CG42238 - chr2L 21019513 intron CG42238 - chr2L_28_21015001 chr2L_21015001 RAL-307_125b 816 chr2L 21020235 21020266 chr2L 21023962 21023973 NOF 8 3723 13.5 11.5 12.5 0.6 3738 chr2L 21020235 intron CG42238 - chr2L 21022104 intron CG42238 - chr2L 21023973 intron CG42238 - chr2L_8_21020001 chr2L_21020001 RAL-307_125b 817 chr2L 21020273 21020299 chr2L 21023955 21024026 NOF 4 3712 8.5 8.5 8.5 0.4 3753 chr2L 21020273 intron CG42238 - chr2L 21022150 intron CG42238 - chr2L 21024026 intron CG42238 - chr2L_4_21020001 chr2L_21020001 RAL-307_125b 818 chr2L 21035354 21035430 chr2L 21035513 21035514 28 155 5.0 4.5 4.8 4.8 160 chr2L 21035354 intron CG42238 - chr2L 21035434 intron CG42238 - chr2L 21035514 intron CG42238 - chr2L_28_21035001 chr2L_21035001 RAL-307_125b 819 chr2L 21041093 21041145 chr2L 21049404 21049456 Tirant 25 8308 15.0 10.5 12.8 1.8 8363 chr2L 21041093 intron CG42238 - chr2L 21045274 intron CG42238 - chr2L 21049456 intron CG42238 - chr2L_25_21045001 chr2L_21045001 RAL-307_125b 820 chr2L 21041146 21041166 chr2L 21049402 21049441 Tirant 15 8302 7.0 10.0 8.5 1.6 8295 chr2L 21041146 intron CG42238 - chr2L 21045294 intron CG42238 - chr2L 21049441 intron CG42238 - chr2L_15_21045001 chr2L_21045001 RAL-307_125b 821 chr2L 21074877 21074944 chr2L 21075018 21075085 30 139 8.0 13.0 10.5 2.6 208 chr2L 21074877 intergenic not near genes chr2L 21074981 intergenic tadr + chr2L 21075085 intergenic tadr + chr2L_30_21070001 chr2L_21070001 RAL-307_125b 822 chr2L 21110609 21110676 chr2L 21110744 21110811 34 134 10.5 12.5 11.5 2.7 202 chr2L 21110609 intron Nhe2 + chr2L 21110710 intron Nhe2 + chr2L 21110811 intron Nhe2 + chr2L_34_21110001 chr2L_21110001 RAL-307_125b 823 chr2L 21118790 21118857 chr2L 21118957 21119004 21 159 8.5 8.5 8.5 2.2 214 chr2L 21118790 intron Nhe2 + chr2L 21118897 intron Nhe2 + chr2L 21119004 intron Nhe2 + chr2L_21_21115001 chr2L_21115001 RAL-307_125b 824 chr2L 21286563 21286632 chr2L 21286691 21286761 33 126 10.5 9.5 10.0 3.0 198 chr2L 21286563 exon Mio - chr2L 21286662 intron Mio - chr2L 21286761 intron Mio - chr2L_33_21285001 chr2L_21285001 RAL-307_125b 825 chr2L 21307422 21307469 chr2L 21307554 21307554 22 129 14.0 13.0 13.5 1.5 132 chr2L 21307422 intron Mio - chr2L 21307488 intron Mio - chr2L 21307554 intron Mio - chr2L_22_21305001 chr2L_21305001 RAL-307_125b 826 chr2L 21307470 21307494 chr2L 21307551 21307626 11 126 9.0 11.5 10.2 1.0 156 chr2L 21307470 intron Mio - chr2L 21307548 intron Mio - chr2L 21307626 intron Mio - chr2L_11_21305001 chr2L_21305001 RAL-307_125b 827 chr2L 21347503 21347574 chr2L 21355025 21355058 blood 21 7519 11.5 3.0 7.2 2.6 7555 chr2L 21347503 intron Tsp39D + chr2L 21351280 intron Tsp39D + chr2L 21355058 intron Tsp39D + chr2L_21_21350001 chr2L_21350001 RAL-307_125b 828 chr2L 21596988 21597037 chr2L 21604780 21604820 roo 18 7791 14.0 13.5 13.8 1.2 7832 chr2L 21596988 intergenic not near genes chr2L 21600904 intergenic not near genes chr2L 21604820 intergenic not near genes chr2L_18_21600001 chr2L_21600001 RAL-307_125b 829 chr2L 21691792 21691825 chr2L 21698305 21698346 Burdock 12 6520 16.0 1.0 8.5 1.3 6554 chr2L 21691792 intron CG31619 + chr2L 21695069 intron CG31619 + chr2L 21698346 intron CG31619 + chr2L_12_21695001 chr2L_21695001 RAL-307_125b 830 chr2L 21754626 21754681 chr2L 21754757 21754812 29 130 12.5 8.0 10.2 2.6 186 chr2L 21754626 intron step - chr2L 21754719 intron step - chr2L 21754812 intron step - chr2L_29_21750001 chr2L_21750001 RAL-307_125b 831 chr2L 21755452 21755521 chr2L 21755626 21755678 30 172 14.0 13.0 13.5 2.1 226 chr2L 21755452 intron step - chr2L 21755565 intron step - chr2L 21755678 intron step - chr2L_30_21755001 chr2L_21755001 RAL-307_125b 832 chr2L 21757527 21757598 chr2L 21757658 21757729 35 131 15.0 13.5 14.2 2.3 202 chr2L 21757527 intergenic step -,CG1416 + chr2L 21757628 intergenic step -,CG1416 + chr2L 21757729 intergenic step -,CG1416 + chr2L_35_21755001 chr2L_21755001 RAL-307_125b 833 chr2L 21828101 21828116 chr2L 21828232 21828238 6 130 18.0 6.0 12.0 0.5 137 chr2L 21828101 intergenic tsh + chr2L 21828170 intergenic tsh + chr2L 21828238 intergenic tsh + chr2L_6_21825001 chr2L_21825001 RAL-307_125b 834 chr2L 21828128 21828175 chr2L 21828229 21828307 16 116 8.5 5.5 7.0 2.0 179 chr2L 21828128 intergenic tsh + chr2L 21828218 intergenic tsh + chr2L 21828307 intergenic tsh + chr2L_16_21825001 chr2L_21825001 RAL-307_125b 835 chr2L 21836352 21836399 chr2L 21836492 21836539 10 140 18.5 11.5 15.0 0.6 187 chr2L 21836352 3` UTR tsh + chr2L 21836446 3` UTR tsh + chr2L 21836539 3` UTR tsh + chr2L_10_21835001 chr2L_21835001 RAL-307_125b 836 chr2L 21836402 21836422 chr2L 21836485 21836562 13 124 16.5 9.5 13.0 0.9 160 chr2L 21836402 3` UTR tsh + chr2L 21836482 3` UTR tsh + chr2L 21836562 3` UTR tsh + chr2L_13_21835001 chr2L_21835001 RAL-307_125b 837 chr2L 21855435 21855501 chr2L 21855571 21855638 18 137 9.5 9.5 9.5 1.7 203 chr2L 21855435 intron CR44917 + chr2L 21855536 intron CR44917 + chr2L 21855638 intron CR44917 + chr2L_18_21855001 chr2L_21855001 RAL-307_125b 838 chr2L 21859275 21859343 chr2L 21859405 21859473 27 124 8.5 10.0 9.2 2.6 198 chr2L 21859275 intron CR44917 + chr2L 21859374 intron CR44917 + chr2L 21859473 intron CR44917 + chr2L_27_21855001 chr2L_21855001 RAL-307_125b 839 chr2L 21933863 21933903 chr2L 21934007 21934027 9 141 5.0 8.5 6.8 1.2 164 chr2L 21933863 intergenic not near genes chr2L 21933945 intergenic not near genes chr2L 21934027 intergenic not near genes chr2L_9_21930001 chr2L_21930001 RAL-307_125b 840 chr2L 21934522 21934588 chr2L 21934695 21934711 16 163 12.0 6.0 9.0 1.6 189 chr2L 21934522 intergenic not near genes chr2L 21934616 intergenic not near genes chr2L 21934711 intergenic not near genes chr2L_16_21930001 chr2L_21930001 RAL-307_125b 841 chr2L 21953795 21953868 chr2L 21954646 21954720 38 853 66.0 68.0 67.0 0.6 925 chr2L 21953795 intergenic not near genes chr2L 21954258 intergenic not near genes chr2L 21954720 intergenic not near genes chr2L_38_21950001 chr2L_21950001 RAL-307_125b 842 chr2L 21973359 21973428 chr2L 21973687 21973733 27 326 5.5 6.0 5.8 4.0 374 chr2L 21973359 intergenic not near genes chr2L 21973546 intergenic not near genes chr2L 21973733 intergenic not near genes chr2L_27_21970001 chr2L_21970001 RAL-307_125b 843 chr2L 21981641 21981707 chr2L 21990856 21990903 roo 29 9213 14.5 14.0 14.2 1.9 9262 chr2L 21981641 exon CG2528 - chr2L 21986272 intron CG2528 - chr2L 21990903 exon CG2528 - chr2L_29_21985001 chr2L_21985001 RAL-307_125b 844 chr2L 22011872 22011946 chr2L 22012003 22012046 22 122 5.5 4.0 4.8 3.8 174 chr2L 22011872 intergenic not near genes chr2L 22011959 intergenic not near genes chr2L 22012046 intergenic not near genes chr2L_22_22010001 chr2L_22010001 RAL-307_125b 845 chr2L 22047204 22047257 chr2L 22047379 22047432 22 172 10.0 14.5 12.2 1.7 228 chr2L 22047204 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047432 intergenic not near genes chr2L_22_22045001 chr2L_22045001 RAL-307_125b 846 chr2L 22082202 22082211 chr2L 22082343 22082352 INE-1 8 141 13.0 24.0 18.5 0.4 150 chr2L 22082202 intergenic not near genes chr2L 22082277 intergenic not near genes chr2L 22082352 intergenic not near genes chr2L_8_22080001 chr2L_22080001 RAL-307_125b 847 chr2L 22107331 22107348 chr2L 22107508 22107525 7 176 19.5 0.5 10.0 0.6 194 chr2L 22107331 intergenic CG10834 - chr2L 22107428 intergenic CG10834 - chr2L 22107525 intergenic CG10834 - chr2L_7_22105001 chr2L_22105001 RAL-307_125b 848 chr2L 22212086 22212159 chr2L 22212683 22212756 37 596 4.5 6.0 5.2 6.0 670 chr2L 22212086 intron Ir40a - chr2L 22212421 intron Ir40a - chr2L 22212756 exon Ir40a - chr2L_37_22210001 chr2L_22210001 RAL-307_125b 849 chr2L 22215866 22215933 chr2L 22216002 22216062 32 134 14.0 14.5 14.2 2.1 196 chr2L 22215866 intergenic not near genes chr2L 22215964 intergenic not near genes chr2L 22216062 intergenic not near genes chr2L_32_22215001 chr2L_22215001 RAL-307_125b 850 chr2L 22239380 22239456 chr2L 22239511 22239587 26 128 13.0 14.0 13.5 1.8 207 chr2L 22239380 intron CR43765 - chr2L 22239484 3` UTR CR43765 - chr2L 22239587 3` UTR CR43765 - chr2L_26_22235001 chr2L_22235001 RAL-307_125b 851 chr2L 22258574 22258641 chr2L 22260748 22260815 G6 29 2174 8.5 12.0 10.2 2.6 2241 chr2L 22258574 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260815 intergenic not near genes chr2L_29_22255001 chr2L_22255001 RAL-307_125b 852 chr2L 22294312 22294379 chr2L 22294450 22294517 16 138 10.0 10.0 10.0 1.5 205 chr2L 22294312 intergenic not near genes chr2L 22294414 intergenic not near genes chr2L 22294517 intergenic not near genes chr2L_16_22290001 chr2L_22290001 RAL-307_125b 853 chr2L 22296866 22296923 chr2L 22297043 22297092 25 176 11.5 15.5 13.5 1.7 226 chr2L 22296866 intergenic not near genes chr2L 22296979 intergenic not near genes chr2L 22297092 intergenic not near genes chr2L_25_22295001 chr2L_22295001 RAL-307_125b 854 chr2L 22548886 22548931 chr2L 22550134 22550171 1360 8 1259 0.0 11.5 5.8 1.2 1285 chr2L 22548886 intergenic CG17490 + chr2L 22549528 intergenic not near genes chr2L 22550171 intergenic CG17493 + chr2L_8_22545001 chr2L_22545001 RAL-307_125b 855 chr2L 22581932 22581995 chr2L 22583771 22583834 S-element 35 1838 9.0 11.0 10.0 3.2 1902 chr2L 22581932 intron CG17494 + chr2L 22582883 intron CG17494 + chr2L 22583834 intron CG17494 + chr2L_35_22580001 chr2L_22580001 RAL-307_125b 856 chr2L 22706766 22706781 chr2L 22706919 22706934 9 153 16.5 9.0 12.8 0.7 168 chr2L 22706766 intron CG40006 - chr2L 22706850 intron CG40006 - chr2L 22706934 intron CG40006 - chr2L_9_22705001 chr2L_22705001 RAL-307_125b 857 chr2L 22706782 22706809 chr2L 22706916 22706962 22 151 11.0 8.5 9.8 2.0 180 chr2L 22706782 intron CG40006 - chr2L 22706872 intron CG40006 - chr2L 22706962 intron CG40006 - chr2L_22_22705001 chr2L_22705001 RAL-307_125b 858 chr2L 22776379 22776446 chr2L 22778218 22778285 S-element 32 1838 10.0 11.0 10.5 2.8 1906 chr2L 22776379 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778285 intergenic not near genes chr2L_32_22775001 chr2L_22775001 RAL-307_125b 859 chr2L 22983907 22983964 chr2L 22984020 22984090 26 124 10.5 9.0 9.8 2.4 183 chr2L 22983907 intron cta + chr2L 22983998 intron cta + chr2L 22984090 intron cta + chr2L_26_22980001 chr2L_22980001 RAL-307_125b 860 chr2L 23168818 23168870 chr2L 23168934 23168991 7 119 14.0 11.5 12.8 0.5 173 chr2L 23168818 intron CG12567 - chr2L 23168904 intron CG12567 - chr2L 23168991 intron CG12567 - chr2L_7_23165001 chr2L_23165001 RAL-307_125b 861 chr2R 469926 469952 chr2R 473215 473243 F-element 7 3289 6.5 11.5 9.0 0.7 3317 chr2R 469926 intergenic not near genes chr2R 471584 intergenic not near genes chr2R 473243 intergenic not near genes chr2R_7_470001 chr2R_470001 RAL-307_125b 862 chr2R 552745 552779 chr2R 553977 553999 1360 4 1238 6.0 6.5 6.2 0.6 1254 chr2R 552745 intron CG40378 + chr2R 553372 intron CG40378 + chr2R 553999 intron CG40378 + chr2R_4_550001 chr2R_550001 RAL-307_125b 863 chr2R 652484 652493 chr2R 652876 652886 4 398 14.0 6.5 10.2 0.4 402 chr2R 652484 intergenic not near genes chr2R 652685 intergenic not near genes chr2R 652886 intergenic not near genes chr2R_4_650001 chr2R_650001 RAL-307_125b 864 chr2R 952382 952456 chr2R 952555 952629 15 172 6.5 9.5 8.0 1.7 247 chr2R 952382 intergenic not near genes chr2R 952506 intergenic not near genes chr2R 952629 intergenic not near genes chr2R_15_950001 chr2R_950001 RAL-307_125b 865 chr2R 1365820 1365884 chr2R 1365982 1366045 34 161 13.5 9.5 11.5 2.7 225 chr2R 1365820 intron l(2)41Ab + chr2R 1365932 intron l(2)41Ab + chr2R 1366045 intron l(2)41Ab + chr2R_34_1365001 chr2R_1365001 RAL-307_125b 866 chr2R 1516564 1516603 chr2R 1521342 1521381 1731 40 4777 37.0 28.5 32.8 1.2 4817 chr2R 1516564 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_40_1515001 chr2R_1515001 RAL-307_125b 867 chr2R 1755914 1755965 chr2R 1756078 1756129 11 164 6.0 4.5 5.2 1.8 215 chr2R 1755914 intron CG41520 + chr2R 1756022 intron CG41520 + chr2R 1756129 intron CG41520 + chr2R_11_1755001 chr2R_1755001 RAL-307_125b 868 chr2R 2015089 2015156 chr2R 2015216 2015283 27 126 12.0 10.5 11.2 2.2 194 chr2R 2015089 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015283 intron CG17684 - chr2R_27_2015001 chr2R_2015001 RAL-307_125b 869 chr2R 2110466 2110501 chr2R 2118074 2118109 17.6 8 7605 11.0 7.5 9.2 0.8 7643 chr2R 2110466 intron CG17684 - chr2R 2114288 intron CG17684 - chr2R 2118109 intron CG17684 - chr2R_8_2110001 chr2R_2110001 RAL-307_125b 870 chr2R 2498943 2499007 chr2R 2508138 2508177 roo 39 9195 13.0 11.5 12.2 3.0 9234 chr2R 2498943 intron MFS17 - chr2R 2503560 intron MFS17 - chr2R 2508177 intron MFS17 - chr2R_39_2500001 chr2R_2500001 RAL-307_125b 871 chr2R 2508262 2508306 chr2R 2508446 2508494 20 188 16.0 8.5 12.2 1.5 232 chr2R 2508262 intron MFS17 - chr2R 2508378 intron MFS17 - chr2R 2508494 intron MFS17 - chr2R_20_2505001 chr2R_2505001 RAL-307_125b 872 chr2R 1373053 1373072 chr2R 2589301 2589320 Cr1a 6 1216248 45.5 35.0 40.2 0.1 1216267 chr2R 1373053 intron l(2)41Ab + chr2R 1981186 intron CG17684 - chr2R 2589320 intergenic not near genes chr2R_6_1980001 chr2R_1980001 RAL-307_125b 873 chr2R 2591485 2591505 chr2R 2594211 2594231 roo 9 2726 54.5 32.0 43.2 0.2 2746 chr2R 2591485 intergenic not near genes chr2R 2592858 intergenic not near genes chr2R 2594231 intergenic not near genes chr2R_9_2590001 chr2R_2590001 RAL-307_125b 874 chr2R 2875339 2875392 chr2R 2878899 2878957 HMS-Beagle 19 3563 46.5 8.0 27.2 0.7 3618 chr2R 2875339 intergenic not near genes chr2R 2877148 intergenic not near genes chr2R 2878957 intergenic not near genes chr2R_19_2875001 chr2R_2875001 RAL-307_125b 875 chr2R 3107699 3107748 chr2R 3108433 3108482 11 734 4.0 7.5 5.8 1.6 783 chr2R 3107699 intron CG42596 + chr2R 3108090 intron CG42596 + chr2R 3108482 intron CG42596 + chr2R_11_3105001 chr2R_3105001 RAL-307_125b 876 chr2R 3144039 3144049 chr2R 3393366 3393377 Doc 7 249327 33.5 17.0 25.2 0.3 249338 chr2R 3144039 intron CG42596 + chr2R 3268708 intergenic not near genes chr2R 3393377 intergenic not near genes chr2R_7_3265001 chr2R_3265001 RAL-307_125b 877 chr2R 3144051 3144103 chr2R 3393364 3393431 Doc 11 249319 31.5 16.5 24.0 0.4 249380 chr2R 3144051 intron CG42596 + chr2R 3268741 intergenic not near genes chr2R 3393431 intergenic not near genes chr2R_11_3265001 chr2R_3265001 RAL-307_125b 878 chr2R 3291819 3292101 chr2R 3915029 3915312 10 623212 12.5 42.0 27.2 0.4 623493 chr2R 3291819 intergenic not near genes chr2R 3603566 intergenic not near genes chr2R 3915312 intron uex - chr2R_10_3600001 chr2R_3600001 RAL-307_125b 879 chr2R 3293718 3293729 chr2R 3293841 3293848 4 123 16.5 7.0 11.8 0.3 130 chr2R 3293718 intergenic not near genes chr2R 3293783 intergenic not near genes chr2R 3293848 intergenic not near genes chr2R_4_3290001 chr2R_3290001 RAL-307_125b 880 chr2R 3515237 3515289 chr2R 3515375 3515427 18 135 49.0 49.0 49.0 0.4 190 chr2R 3515237 intergenic not near genes chr2R 3515332 intergenic not near genes chr2R 3515427 intergenic not near genes chr2R_18_3515001 chr2R_3515001 RAL-307_125b 881 chr2R 3532587 3532620 chr2R 3536068 3536113 Doc 10 3491 8.5 8.0 8.2 1.1 3526 chr2R 3532587 intergenic not near genes chr2R 3534350 intergenic not near genes chr2R 3536113 intergenic not near genes chr2R_10_3530001 chr2R_3530001 RAL-307_125b 882 chr2R 3702650 3702666 chr2R 3702765 3702782 5 117 13.5 14.0 13.8 0.3 132 chr2R 3702650 intergenic not near genes chr2R 3702716 intergenic not near genes chr2R 3702782 intergenic not near genes chr2R_5_3700001 chr2R_3700001 RAL-307_125b 883 chr2R 4604508 4604530 chr2R 4604637 4604659 9 129 16.0 12.0 14.0 0.6 151 chr2R 4604508 intron p120ctn + chr2R 4604584 intron p120ctn + chr2R 4604659 intron p120ctn + chr2R_9_4600001 chr2R_4600001 RAL-307_125b 884 chr2R 4604531 4604582 chr2R 4604636 4604706 12 120 8.0 11.5 9.8 1.1 175 chr2R 4604531 intron p120ctn + chr2R 4604618 intron p120ctn + chr2R 4604706 intron p120ctn + chr2R_12_4600001 chr2R_4600001 RAL-307_125b 885 chr2R 4617882 4617949 chr2R 4618198 4618262 12 320 5.5 10.0 7.8 1.4 380 chr2R 4617882 intergenic not near genes chr2R 4618072 intergenic not near genes chr2R 4618262 intergenic not near genes chr2R_12_4615001 chr2R_4615001 RAL-307_125b 886 chr2R 4622917 4622973 chr2R 4624118 4624175 1360 30 1205 10.0 8.0 9.0 3.0 1258 chr2R 4622917 intergenic CR44101 - chr2R 4623546 intergenic not near genes chr2R 4624175 intergenic not near genes chr2R_30_4620001 chr2R_4620001 RAL-307_125b 887 chr2R 4622976 4622978 chr2R 4624109 4624187 1360 4 1190 8.5 5.0 6.8 0.5 1211 chr2R 4622976 intergenic CR44101 - chr2R 4623582 intergenic not near genes chr2R 4624187 intergenic not near genes chr2R_4_4620001 chr2R_4620001 RAL-307_125b 888 chr2R 4624605 4624663 chr2R 4626555 4626595 Bica 28 1953 10.0 15.0 12.5 2.1 1990 chr2R 4624605 intergenic not near genes chr2R 4625600 intergenic not near genes chr2R 4626595 intergenic not near genes chr2R_28_4625001 chr2R_4625001 RAL-307_125b 889 chr2R 4634153 4634157 chr2R 4634282 4634286 6 129 14.5 24.0 19.2 0.3 133 chr2R 4634153 intergenic not near genes chr2R 4634220 intergenic not near genes chr2R 4634286 intergenic not near genes chr2R_6_4630001 chr2R_4630001 RAL-307_125b 890 chr2R 4634161 4634181 chr2R 4634280 4634297 10 127 9.5 23.5 16.5 0.6 136 chr2R 4634161 intergenic not near genes chr2R 4634229 intergenic not near genes chr2R 4634297 intergenic not near genes chr2R_10_4630001 chr2R_4630001 RAL-307_125b 891 chr2R 4688102 4688109 chr2R 4688227 4688252 7 140 13.0 14.5 13.8 0.5 150 chr2R 4688102 intergenic not near genes chr2R 4688177 intergenic not near genes chr2R 4688252 intergenic not near genes chr2R_7_4685001 chr2R_4685001 RAL-307_125b 892 chr2R 4688112 4688126 chr2R 4688222 4688269 11 140 10.0 13.0 11.5 0.9 157 chr2R 4688112 intergenic not near genes chr2R 4688190 intergenic not near genes chr2R 4688269 intergenic not near genes chr2R_11_4685001 chr2R_4685001 RAL-307_125b 893 chr2R 4716230 4716289 chr2R 4716358 4716432 24 136 7.5 8.5 8.0 2.7 202 chr2R 4716230 intron Nipped-B - chr2R 4716331 intron Nipped-B - chr2R 4716432 intron Nipped-B - chr2R_24_4715001 chr2R_4715001 RAL-307_125b 894 chr2R 4730760 4730821 chr2R 4731201 4731221 11 433 7.0 8.0 7.5 1.3 461 chr2R 4730760 intron CR45471 + chr2R 4730990 5` UTR CR45471 + chr2R 4731221 5` UTR CR45471 + chr2R_11_4730001 chr2R_4730001 RAL-307_125b 895 chr2R 4838835 4838900 chr2R 4840402 4840463 transib2 26 1571 15.0 19.5 17.2 1.4 1628 chr2R 4838835 intergenic not near genes chr2R 4839649 intergenic not near genes chr2R 4840463 intergenic not near genes chr2R_26_4835001 chr2R_4835001 RAL-307_125b 896 chr2R 4870695 4870739 chr2R 4871256 4871300 R1A1-element 8 557 17.0 10.5 13.8 0.5 605 chr2R 4870695 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871300 intergenic not near genes chr2R_8_4870001 chr2R_4870001 RAL-307_125b 897 chr2R 4887577 4887627 chr2R 4887823 4887873 18 246 13.5 15.0 14.2 1.2 296 chr2R 4887577 intergenic not near genes chr2R 4887725 intergenic not near genes chr2R 4887873 intergenic not near genes chr2R_18_4885001 chr2R_4885001 RAL-307_125b 898 chr2R 4916051 4916116 chr2R 4916179 4916244 37 128 10.5 13.5 12.0 2.8 193 chr2R 4916051 intergenic not near genes chr2R 4916148 intergenic not near genes chr2R 4916244 intergenic not near genes chr2R_37_4915001 chr2R_4915001 RAL-307_125b 899 chr2R 4956976 4957046 chr2R 4957129 4957199 28 152 2.5 11.0 6.8 3.6 223 chr2R 4956976 intron Ir41a + chr2R 4957088 intron Ir41a + chr2R 4957199 intron Ir41a + chr2R_28_4955001 chr2R_4955001 RAL-307_125b 900 chr2R 5144938 5145008 chr2R 5145228 5145299 28 291 9.0 10.5 9.8 2.6 361 chr2R 5144938 intron Atf6 + chr2R 5145118 intron Atf6 + chr2R 5145299 intron Atf6 + chr2R_28_5145001 chr2R_5145001 RAL-307_125b 901 chr2R 5192235 5192356 chr2R 5192399 5192480 8 122 2.0 3.5 2.8 2.1 245 chr2R 5192235 intron Nipped-A - chr2R 5192358 intron Nipped-A - chr2R 5192480 intron Nipped-A - chr2R_8_5190001 chr2R_5190001 RAL-307_125b 902 chr2R 5237300 5237360 chr2R 5237432 5237462 33 130 11.5 0.0 5.8 4.9 162 chr2R 5237300 intron Nipped-A - chr2R 5237381 intron Nipped-A - chr2R 5237462 intron Nipped-A - chr2R_33_5235001 chr2R_5235001 RAL-307_125b 903 chr2R 5417951 5417957 chr2R 5420633 5420638 Burdock 4 2682 30.5 12.5 21.5 0.2 2687 chr2R 5417951 intron laccase2 + chr2R 5419294 intron laccase2 + chr2R 5420638 intron laccase2 + chr2R_4_5415001 chr2R_5415001 RAL-307_125b 904 chr2R 5417959 5418012 chr2R 5420626 5420679 Burdock 34 2680 14.5 11.0 12.8 2.5 2720 chr2R 5417959 intron laccase2 + chr2R 5419319 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_34_5415001 chr2R_5415001 RAL-307_125b 905 chr2R 5472318 5472389 chr2R 5472463 5472506 36 139 10.0 11.0 10.5 3.1 188 chr2R 5472318 intron CG30440 - chr2R 5472412 intron CG30440 - chr2R 5472506 intron CG30440 - chr2R_36_5470001 chr2R_5470001 RAL-307_125b 906 chr2R 5476309 5476329 chr2R 5476903 5476923 18 594 18.5 15.0 16.8 1.0 614 chr2R 5476309 intron CG30440 - chr2R 5476616 intron CG30440 - chr2R 5476923 intron CG30440 - chr2R_18_5475001 chr2R_5475001 RAL-307_125b 907 chr2R 5476331 5476384 chr2R 5476901 5476957 22 583 6.0 14.5 10.2 2.0 626 chr2R 5476331 intron CG30440 - chr2R 5476644 intron CG30440 - chr2R 5476957 intron CG30440 - chr2R_22_5475001 chr2R_5475001 RAL-307_125b 908 chr2R 5484847 5484887 chr2R 5484969 5485024 20 133 1.0 17.0 9.0 2.0 177 chr2R 5484847 intron CG30440 - chr2R 5484936 intron CG30440 - chr2R 5485024 intron CG30440 - chr2R_20_5480001 chr2R_5480001 RAL-307_125b 909 chr2R 5484888 5484890 chr2R 5484955 5485027 5 120 1.0 12.5 6.8 0.6 139 chr2R 5484888 intron CG30440 - chr2R 5484958 intron CG30440 - chr2R 5485027 intron CG30440 - chr2R_5_5480001 chr2R_5480001 RAL-307_125b 910 chr2R 5541888 5541953 chr2R 5542171 5542236 21 281 12.5 7.5 10.0 1.9 348 chr2R 5541888 intron CG30438 + chr2R 5542062 intron CG30438 + chr2R 5542236 intron CG30438 + chr2R_21_5540001 chr2R_5540001 RAL-307_125b 911 chr2R 5543199 5543215 chr2R 5547317 5547349 invader1 7 4132 0.0 21.5 10.8 0.6 4150 chr2R 5543199 intron CG30438 + chr2R 5545274 intron CG30438 + chr2R 5547349 intron CG30438 + chr2R_7_5545001 chr2R_5545001 RAL-307_125b 912 chr2R 5581401 5581415 chr2R 5627660 5627674 4 46259 48.5 28.0 38.2 0.1 46273 chr2R 5581401 intergenic not near genes chr2R 5604538 intron Fis1 - chr2R 5627674 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-307_125b 913 chr2R 5621323 5621399 chr2R 5621453 5621529 10 118 8.0 7.0 7.5 1.2 206 chr2R 5621323 intergenic not near genes chr2R 5621426 intergenic not near genes chr2R 5621529 intergenic not near genes chr2R_10_5620001 chr2R_5620001 RAL-307_125b 914 chr2R 5606789 5606863 chr2R 5736774 5736802 4 129953 28.5 20.0 24.2 0.2 130013 chr2R 5606789 intergenic not near genes chr2R 5671796 5` UTR kune + chr2R 5736802 intergenic not near genes chr2R_4_5670001 chr2R_5670001 RAL-307_125b 915 chr2R 5750412 5750454 chr2R 5750552 5750573 26 140 14.5 12.0 13.2 1.8 161 chr2R 5750412 intergenic not near genes chr2R 5750492 intergenic not near genes chr2R 5750573 intergenic not near genes chr2R_26_5750001 chr2R_5750001 RAL-307_125b 916 chr2R 5772480 5772549 chr2R 5772624 5772693 24 141 10.0 12.5 11.2 2.0 213 chr2R 5772480 3` UTR Gp210 + chr2R 5772586 3` UTR Gp210 + chr2R 5772693 3` UTR Gp210 + chr2R_24_5770001 chr2R_5770001 RAL-307_125b 917 chr2R 5772786 5772856 chr2R 5772918 5772988 27 131 14.5 11.0 12.8 2.0 202 chr2R 5772786 3` UTR Gp210 + chr2R 5772887 3` UTR Gp210 + chr2R 5772988 3` UTR Gp210 + chr2R_27_5770001 chr2R_5770001 RAL-307_125b 918 chr2R 5790418 5790483 chr2R 5790553 5790616 25 134 12.0 9.5 10.8 2.1 198 chr2R 5790418 intergenic not near genes chr2R 5790517 intergenic not near genes chr2R 5790616 intergenic not near genes chr2R_25_5790001 chr2R_5790001 RAL-307_125b 919 chr2R 5869234 5869302 chr2R 5874360 5874428 flea 36 5122 9.5 9.5 9.5 3.4 5194 chr2R 5869234 intergenic not near genes chr2R 5871831 intergenic not near genes chr2R 5874428 intergenic not near genes chr2R_36_5870001 chr2R_5870001 RAL-307_125b 920 chr2R 5876870 5876929 chr2R 5877104 5877168 26 241 9.5 3.5 6.5 3.5 298 chr2R 5876870 intergenic not near genes chr2R 5877019 intergenic not near genes chr2R 5877168 intergenic not near genes chr2R_26_5875001 chr2R_5875001 RAL-307_125b 921 chr2R 5885317 5885375 chr2R 5885494 5885554 33 178 9.5 11.0 10.2 2.9 237 chr2R 5885317 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885554 5` UTR CR44125 + chr2R_33_5885001 chr2R_5885001 RAL-307_125b 922 chr2R 5902106 5902186 chr2R 5909715 5909795 17.6 21 7605 6.5 7.0 6.8 2.7 7689 chr2R 5902106 5` UTR CG43366 + chr2R 5905950 intron CG43366 + chr2R 5909795 intron CG43366 + chr2R_21_5905001 chr2R_5905001 RAL-307_125b 923 chr2R 5917727 5917795 chr2R 5917856 5917924 19 129 8.5 6.0 7.2 2.3 197 chr2R 5917727 intron CG43366 + chr2R 5917826 intron CG43366 + chr2R 5917924 intron CG43366 + chr2R_19_5915001 chr2R_5915001 RAL-307_125b 924 chr2R 5932750 5932819 chr2R 5932879 5932935 18 124 10.5 7.5 9.0 1.8 185 chr2R 5932750 intergenic not near genes chr2R 5932842 intergenic not near genes chr2R 5932935 intergenic not near genes chr2R_18_5930001 chr2R_5930001 RAL-307_125b 925 chr2R 5939625 5939670 chr2R 5940871 5940912 INE-1 25 1244 10.0 23.0 16.5 1.4 1287 chr2R 5939625 intergenic not near genes chr2R 5940268 intergenic not near genes chr2R 5940912 intergenic not near genes chr2R_25_5940001 chr2R_5940001 RAL-307_125b 926 chr2R 5953036 5953097 chr2R 5953164 5953224 17 122 10.5 6.0 8.2 1.8 188 chr2R 5953036 intergenic not near genes chr2R 5953130 intergenic not near genes chr2R 5953224 intergenic not near genes chr2R_17_5950001 chr2R_5950001 RAL-307_125b 927 chr2R 5991885 5991963 chr2R 5992021 5992101 35 136 8.0 10.5 9.2 3.4 216 chr2R 5991885 intron Src42A + chr2R 5991993 intron Src42A + chr2R 5992101 intron Src42A + chr2R_35_5990001 chr2R_5990001 RAL-307_125b 928 chr2R 6013631 6013663 chr2R 6013755 6013784 9 117 10.5 13.0 11.8 0.7 153 chr2R 6013631 intergenic Act42A - chr2R 6013708 intergenic Act42A - chr2R 6013784 intergenic Act42A - chr2R_9_6010001 chr2R_6010001 RAL-307_125b 929 chr2R 6013664 6013685 chr2R 6013752 6013818 11 119 7.0 12.0 9.5 1.0 154 chr2R 6013664 intergenic Act42A - chr2R 6013741 intergenic Act42A - chr2R 6013818 intergenic Act42A - chr2R_11_6010001 chr2R_6010001 RAL-307_125b 930 chr2R 6096678 6096705 chr2R 6101926 6101953 BS 6 5246 14.5 8.0 11.2 0.5 5275 chr2R 6096678 intron EcR - chr2R 6099316 intron EcR - chr2R 6101953 intron EcR - chr2R_6_6095001 chr2R_6095001 RAL-307_125b 931 chr2R 6096710 6096750 chr2R 6101914 6101972 BS 14 5227 6.0 6.5 6.2 1.9 5262 chr2R 6096710 intron EcR - chr2R 6099341 intron EcR - chr2R 6101972 intron EcR - chr2R_14_6095001 chr2R_6095001 RAL-307_125b 932 chr2R 6126890 6126964 chr2R 6127048 6127122 41 155 5.5 8.0 6.8 5.3 232 chr2R 6126890 intron EcR - chr2R 6127006 intron EcR - chr2R 6127122 intron EcR - chr2R_41_6125001 chr2R_6125001 RAL-307_125b 933 chr2R 6168165 6168222 chr2R 6168286 6168354 37 130 8.0 11.0 9.5 3.5 189 chr2R 6168165 intron EcR - chr2R 6168260 intron EcR - chr2R 6168354 intron EcR - chr2R_37_6165001 chr2R_6165001 RAL-307_125b 934 chr2R 6178071 6178141 chr2R 6178247 6178317 39 176 8.0 11.5 9.8 3.6 246 chr2R 6178071 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178317 intergenic not near genes chr2R_39_6175001 chr2R_6175001 RAL-307_125b 935 chr2R 6194639 6194702 chr2R 6194772 6194803 15 126 11.5 14.5 13.0 1.1 164 chr2R 6194639 intron Ptr - chr2R 6194721 intron Ptr - chr2R 6194803 intron Ptr - chr2R_15_6190001 chr2R_6190001 RAL-307_125b 936 chr2R 3998877 3998903 chr2R 6486802 6486828 4 2487925 33.5 32.0 32.8 0.1 2487951 chr2R 3998877 intergenic not near genes chr2R 5242852 intron Nipped-A - chr2R 6486828 intergenic not near genes chr2R_4_5240001 chr2R_5240001 RAL-307_125b 937 chr2R 6494489 6494547 chr2R 6499300 6499359 F-element 14 4812 5.5 3.5 4.5 2.5 4870 chr2R 6494489 intergenic not near genes chr2R 6496924 intergenic not near genes chr2R 6499359 intergenic not near genes chr2R_14_6495001 chr2R_6495001 RAL-307_125b 938 chr2R 6530719 6530794 chr2R 6530849 6530924 38 129 10.5 6.0 8.2 4.1 205 chr2R 6530719 intron jing + chr2R 6530822 intron jing + chr2R 6530924 intron jing + chr2R_38_6530001 chr2R_6530001 RAL-307_125b 939 chr2R 6539772 6539815 chr2R 6539945 6539980 6 168 20.0 1.5 10.8 0.5 208 chr2R 6539772 intron jing + chr2R 6539876 intron jing + chr2R 6539980 intron jing + chr2R_6_6535001 chr2R_6535001 RAL-307_125b 940 chr2R 6579758 6579805 chr2R 6584895 6584942 flea 19 5136 8.0 8.0 8.0 2.1 5184 chr2R 6579758 intron jing + chr2R 6582350 intron jing + chr2R 6584942 intron jing + chr2R_19_6580001 chr2R_6580001 RAL-307_125b 941 chr2R 6588118 6588171 chr2R 6591110 6591138 10 2979 52.5 43.0 47.8 0.2 3020 chr2R 6588118 intron jing + chr2R 6589628 intron jing + chr2R 6591138 intron jing + chr2R_10_6585001 chr2R_6585001 RAL-307_125b 942 chr2R 6633150 6633221 chr2R 6633277 6633348 31 127 8.0 9.0 8.5 3.3 198 chr2R 6633150 intergenic Vha16-1 -,Trap1 - chr2R 6633249 intergenic Vha16-1 -,Trap1 - chr2R 6633348 intergenic Vha16-1 -,Trap1 - chr2R_31_6630001 chr2R_6630001 RAL-307_125b 943 chr2R 6699549 6699616 chr2R 6699684 6699751 36 134 8.0 10.5 9.2 3.5 202 chr2R 6699549 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699751 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_36_6695001 chr2R_6695001 RAL-307_125b 944 chr2R 6952130 6952185 chr2R 6959761 6959815 opus 19 7628 13.0 11.0 12.0 1.5 7685 chr2R 6952130 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955972 intron,intron mim -,CheB42c - chr2R 6959815 intron,intron mim -,CheB42c - chr2R_19_6955001 chr2R_6955001 RAL-307_125b 945 chr2R 6965215 6965231 chr2R 6965351 6965357 8 135 18.0 11.5 14.8 0.5 142 chr2R 6965215 intron,intron mim -,CheB42c - chr2R 6965286 intron,intron mim -,CheB42c - chr2R 6965357 intron,intron mim -,CheB42c - chr2R_8_6965001 chr2R_6965001 RAL-307_125b 946 chr2R 6965232 6965293 chr2R 6965348 6965378 29 127 4.0 10.5 7.2 3.5 146 chr2R 6965232 intron,intron mim -,CheB42c - chr2R 6965305 intron,intron mim -,CheB42c - chr2R 6965378 intron,intron mim -,CheB42c - chr2R_29_6965001 chr2R_6965001 RAL-307_125b 947 chr2R 7139944 7139947 chr2R 7141451 7141468 hopper2 4 1518 0.0 13.0 6.5 0.5 1524 chr2R 7139944 intergenic not near genes chr2R 7140706 intergenic not near genes chr2R 7141468 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RAL-307_125b 948 chr2R 7180956 7181021 chr2R 7181081 7181147 26 123 6.5 11.5 9.0 2.6 191 chr2R 7180956 intron pk + chr2R 7181052 intron pk + chr2R 7181147 intron pk + chr2R_26_7180001 chr2R_7180001 RAL-307_125b 949 chr2R 7196531 7196546 chr2R 7201356 7201371 F-element 13 4824 15.0 9.5 12.2 1.0 4840 chr2R 7196531 intron pk + chr2R 7198951 intron pk + chr2R 7201371 intron pk + chr2R_13_7195001 chr2R_7195001 RAL-307_125b 950 chr2R 7196547 7196598 chr2R 7201344 7201430 F-element 17 4825 5.5 5.0 5.2 2.7 4883 chr2R 7196547 intron pk + chr2R 7198988 intron pk + chr2R 7201430 intron pk + chr2R_17_7195001 chr2R_7195001 RAL-307_125b 951 chr2R 7209846 7209867 chr2R 7217636 7217665 roo 11 7795 16.0 23.5 19.8 0.5 7819 chr2R 7209846 intron pk + chr2R 7213756 intron pk + chr2R 7217665 intron pk + chr2R_11_7210001 chr2R_7210001 RAL-307_125b 952 chr2R 7235780 7235816 chr2R 7240922 7240958 jockey 10 5141 19.5 2.0 10.8 0.8 5178 chr2R 7235780 intergenic not near genes chr2R 7238369 intergenic not near genes chr2R 7240958 intergenic not near genes chr2R_10_7235001 chr2R_7235001 RAL-307_125b 953 chr2R 7235817 7235840 chr2R 7240917 7240921 jockey 10 5122 13.0 2.0 7.5 1.2 5104 chr2R 7235817 intergenic not near genes chr2R 7238369 intergenic not near genes chr2R 7240921 intergenic not near genes chr2R_10_7235001 chr2R_7235001 RAL-307_125b 954 chr2R 7242566 7242616 chr2R 7242693 7242745 11 129 5.0 6.0 5.5 1.7 179 chr2R 7242566 intergenic Ady43A - chr2R 7242656 intergenic Ady43A - chr2R 7242745 intergenic Ady43A - chr2R_11_7240001 chr2R_7240001 RAL-307_125b 955 chr2R 7250694 7250740 chr2R 7250828 7250888 13 134 11.5 8.5 10.0 1.2 194 chr2R 7250694 intergenic Gadd45 + chr2R 7250791 intergenic Gadd45 + chr2R 7250888 intergenic Gadd45 + chr2R_13_7250001 chr2R_7250001 RAL-307_125b 956 chr2R 7272221 7272286 chr2R 7272342 7272373 6 116 2.0 3.5 2.8 1.6 152 chr2R 7272221 intergenic Br140 - chr2R 7272297 3` UTR Br140 - chr2R 7272373 3` UTR Br140 - chr2R_6_7270001 chr2R_7270001 RAL-307_125b 957 chr2R 7290139 7290216 chr2R 7290291 7290368 27 151 9.5 10.0 9.8 2.5 229 chr2R 7290139 intron pwn + chr2R 7290254 intron pwn + chr2R 7290368 intron pwn + chr2R_27_7290001 chr2R_7290001 RAL-307_125b 958 chr2R 7434848 7434909 chr2R 7439199 7439260 Juan 15 4351 13.0 13.5 13.2 1.1 4412 chr2R 7434848 3` UTR so + chr2R 7437054 intergenic not near genes chr2R 7439260 intergenic not near genes chr2R_15_7435001 chr2R_7435001 RAL-307_125b 959 chr2R 7608370 7608427 chr2R 7613623 7613662 I-element 30 5249 11.0 9.0 10.0 2.7 5292 chr2R 7608370 intron CG1358 - chr2R 7611016 intron CG1358 - chr2R 7613662 intron CG1358 - chr2R_30_7610001 chr2R_7610001 RAL-307_125b 960 chr2R 7614713 7614781 chr2R 7614850 7614896 24 138 0.0 9.5 4.8 4.1 183 chr2R 7614713 intron CG1358 - chr2R 7614804 intron CG1358 - chr2R 7614896 intron CG1358 - chr2R_24_7610001 chr2R_7610001 RAL-307_125b 961 chr2R 7639320 7639332 chr2R 7639455 7639472 7 139 5.5 10.0 7.8 0.8 152 chr2R 7639320 intron CG43340 + chr2R 7639396 intron CG43340 + chr2R 7639472 intron CG43340 + chr2R_7_7635001 chr2R_7635001 RAL-307_125b 962 chr2R 7642819 7642891 chr2R 7642949 7643021 49 128 9.0 11.5 10.2 4.4 202 chr2R 7642819 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7643021 intron CG43340 + chr2R_49_7640001 chr2R_7640001 RAL-307_125b 963 chr2R 7691966 7692038 chr2R 7692097 7692169 23 127 5.5 10.5 8.0 2.6 203 chr2R 7691966 intron CG1399 - chr2R 7692068 intron CG1399 - chr2R 7692169 intron CG1399 - chr2R_23_7690001 chr2R_7690001 RAL-307_125b 964 chr2R 7737861 7737906 chr2R 7737990 7738035 29 129 11.5 7.0 9.2 2.8 174 chr2R 7737861 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738035 intergenic not near genes chr2R_29_7735001 chr2R_7735001 RAL-307_125b 965 chr2R 7815630 7815693 chr2R 7822149 7822212 Burdock 27 6519 5.5 12.0 8.8 2.8 6582 chr2R 7815630 intergenic CG1882 + chr2R 7818921 intergenic not near genes chr2R 7822212 3` UTR cathD - chr2R_27_7815001 chr2R_7815001 RAL-307_125b 966 chr2R 7862185 7862247 chr2R 7867347 7867408 flea 13 5156 8.5 5.0 6.8 1.7 5223 chr2R 7862185 intron Dgk - chr2R 7864796 intron Dgk - chr2R 7867408 intron Dgk - chr2R_13_7860001 chr2R_7860001 RAL-307_125b 967 chr2R 7869150 7869169 chr2R 7873986 7874005 Doc 10 4835 28.0 12.5 20.2 0.5 4855 chr2R 7869150 intron Dgk - chr2R 7871578 intron Dgk - chr2R 7874005 intron Dgk - chr2R_10_7870001 chr2R_7870001 RAL-307_125b 968 chr2R 7869170 7869216 chr2R 7873981 7874002 Doc 21 4827 13.0 12.0 12.5 1.6 4832 chr2R 7869170 intron Dgk - chr2R 7871586 intron Dgk - chr2R 7874002 intron Dgk - chr2R_21_7870001 chr2R_7870001 RAL-307_125b 969 chr2R 7901651 7901716 chr2R 7901859 7901913 29 205 6.0 5.0 5.5 4.5 262 chr2R 7901651 intron CG30377 + chr2R 7901782 intron CG30377 + chr2R 7901913 intron CG30377 + chr2R_29_7900001 chr2R_7900001 RAL-307_125b 970 chr2R 7915668 7915695 chr2R 7915808 7915837 17 141 12.5 9.5 11.0 1.4 169 chr2R 7915668 intron CG12159 - chr2R 7915752 intron CG12159 - chr2R 7915837 intron CG12159 - chr2R_17_7915001 chr2R_7915001 RAL-307_125b 971 chr2R 7915702 7915740 chr2R 7915804 7915882 16 140 5.5 8.0 6.8 2.1 180 chr2R 7915702 intron CG12159 - chr2R 7915792 intron CG12159 - chr2R 7915882 intron CG12159 - chr2R_16_7915001 chr2R_7915001 RAL-307_125b 972 chr2R 7996964 7997046 chr2R 7997102 7997153 25 130 10.0 11.5 10.8 2.1 189 chr2R 7996964 intron Hey - chr2R 7997058 intron Hey - chr2R 7997153 intron Hey - chr2R_25_7995001 chr2R_7995001 RAL-307_125b 973 chr2R 8015619 8015644 chr2R 8017687 8017717 6 2070 15.5 11.0 13.2 0.4 2098 chr2R 8015619 intergenic mir-4981 + chr2R 8016668 intergenic not near genes chr2R 8017717 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-307_125b 974 chr2R 8015645 8015678 chr2R 8017676 8017722 7 2047 7.5 7.0 7.2 0.9 2077 chr2R 8015645 intergenic mir-4981 + chr2R 8016684 intergenic not near genes chr2R 8017722 intergenic not near genes chr2R_7_8015001 chr2R_8015001 RAL-307_125b 975 chr2R 8026769 8026837 chr2R 8026895 8026963 27 126 6.0 7.5 6.8 3.5 194 chr2R 8026769 intergenic CR45267 + chr2R 8026866 intergenic CR45267 + chr2R 8026963 intergenic CR45267 + chr2R_27_8025001 chr2R_8025001 RAL-307_125b 976 chr2R 8028518 8028594 chr2R 8028649 8028713 36 126 11.5 11.0 11.2 3.0 195 chr2R 8028518 intergenic CR43724 - chr2R 8028616 intergenic CR43724 - chr2R 8028713 intergenic CR43724 - chr2R_36_8025001 chr2R_8025001 RAL-307_125b 977 chr2R 8144578 8144643 chr2R 8144764 8144829 33 185 11.5 14.5 13.0 2.4 251 chr2R 8144578 intron Lpin - chr2R 8144704 intron Lpin - chr2R 8144829 intron Lpin - chr2R_33_8140001 chr2R_8140001 RAL-307_125b 978 chr2R 8151638 8151712 chr2R 8151766 8151840 39 127 10.5 11.5 11.0 3.2 202 chr2R 8151638 intron,intron Lpin -,kermit - chr2R 8151739 intron,intron Lpin -,kermit - chr2R 8151840 intron,intron Lpin -,kermit - chr2R_39_8150001 chr2R_8150001 RAL-307_125b 979 chr2R 8152641 8152674 chr2R 8152776 8152807 14 133 19.0 12.5 15.8 0.8 166 chr2R 8152641 intron,intron Lpin -,kermit - chr2R 8152724 intron,intron Lpin -,kermit - chr2R 8152807 intron,intron Lpin -,kermit - chr2R_14_8150001 chr2R_8150001 RAL-307_125b 980 chr2R 8152676 8152701 chr2R 8152775 8152836 10 131 12.0 12.0 12.0 0.8 160 chr2R 8152676 intron,intron Lpin -,kermit - chr2R 8152756 intron,intron Lpin -,kermit - chr2R 8152836 intron,intron Lpin -,kermit - chr2R_10_8150001 chr2R_8150001 RAL-307_125b 981 chr2R 8156682 8156695 chr2R 8156809 8156822 4 127 12.0 13.5 12.8 0.3 140 chr2R 8156682 intergenic Lpin -,kermit -,CR44068 + chr2R 8156752 intergenic Lpin -,kermit -,CR44068 + chr2R 8156822 intergenic Lpin -,kermit -,CR44068 + chr2R_4_8155001 chr2R_8155001 RAL-307_125b 982 chr2R 8156698 8156752 chr2R 8156808 8156879 22 121 4.5 13.0 8.8 2.2 181 chr2R 8156698 intergenic Lpin -,kermit -,CR44068 + chr2R 8156788 intergenic Lpin -,kermit -,CR44068 + chr2R 8156879 intergenic Lpin -,kermit -,CR44068 + chr2R_22_8155001 chr2R_8155001 RAL-307_125b 983 chr2R 8160886 8160943 chr2R 8161024 8161083 1360 21 134 8.5 10.0 9.2 2.1 197 chr2R 8160886 exon CG8708 - chr2R 8160984 intron CG8708 - chr2R 8161083 intron CG8708 - chr2R_21_8160001 chr2R_8160001 RAL-307_125b 984 chr2R 8193767 8193841 chr2R 8193902 8193976 38 132 9.5 6.0 7.8 4.3 209 chr2R 8193767 intron LRP1 + chr2R 8193872 intron LRP1 + chr2R 8193976 intron LRP1 + chr2R_38_8190001 chr2R_8190001 RAL-307_125b 985 chr2R 8235986 8236029 chr2R 8236117 8236158 11 128 12.0 7.5 9.8 1.0 172 chr2R 8235986 intergenic not near genes chr2R 8236072 intergenic not near genes chr2R 8236158 intergenic not near genes chr2R_11_8235001 chr2R_8235001 RAL-307_125b 986 chr2R 8243944 8243993 chr2R 8244122 8244181 17 184 6.5 16.0 11.2 1.4 237 chr2R 8243944 intergenic CR44445 - chr2R 8244062 intergenic not near genes chr2R 8244181 intergenic not near genes chr2R_17_8240001 chr2R_8240001 RAL-307_125b 987 chr2R 8249520 8249561 chr2R 8249652 8249659 19 129 15.5 7.5 11.5 1.5 139 chr2R 8249520 5` UTR CG44439 - chr2R 8249590 5` UTR CG44439 - chr2R 8249659 intergenic CG44439 - chr2R_19_8245001 chr2R_8245001 RAL-307_125b 988 chr2R 8249572 8249598 chr2R 8249649 8249730 13 128 12.0 8.5 10.2 1.2 158 chr2R 8249572 5` UTR CG44439 - chr2R 8249651 intergenic CG44439 - chr2R 8249730 intergenic CG44439 - chr2R_13_8245001 chr2R_8245001 RAL-307_125b 989 chr2R 8278905 8278966 chr2R 8279121 8279196 20 224 0.5 9.0 4.8 3.4 291 chr2R 8278905 intergenic not near genes chr2R 8279050 intergenic not near genes chr2R 8279196 intergenic not near genes chr2R_20_8275001 chr2R_8275001 RAL-307_125b 990 chr2R 8330821 8330886 chr2R 8331357 8331422 roo 26 533 9.0 12.5 10.8 2.2 601 chr2R 8330821 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331422 intron pdm3 + chr2R_26_8330001 chr2R_8330001 RAL-307_125b 991 chr2R 8398193 8398233 chr2R 8403004 8403039 Doc 21 4824 6.0 10.0 8.0 2.3 4846 chr2R 8398193 intron CG2121 - chr2R 8400616 intron CG2121 - chr2R 8403039 intron CG2121 - chr2R_21_8400001 chr2R_8400001 RAL-307_125b 992 chr2R 8416268 8416288 chr2R 8417142 8417155 I-element 7 873 15.5 13.0 14.2 0.5 887 chr2R 8416268 intergenic not near genes chr2R 8416712 intergenic CG43296 - chr2R 8417155 intergenic CG43296 - chr2R_7_8415001 chr2R_8415001 RAL-307_125b 993 chr2R 8489678 8489757 chr2R 8489807 8489818 41 122 10.0 7.5 8.8 4.2 140 chr2R 8489678 intron mtt - chr2R 8489748 intron mtt - chr2R 8489818 intron mtt - chr2R_41_8485001 chr2R_8485001 RAL-307_125b 994 chr2R 8508727 8508790 chr2R 8508854 8508897 15 120 6.5 7.5 7.0 1.9 170 chr2R 8508727 intron mtt - chr2R 8508812 intron mtt - chr2R 8508897 intron mtt - chr2R_15_8505001 chr2R_8505001 RAL-307_125b 995 chr2R 8531883 8531904 chr2R 8532182 8532203 10 298 25.5 12.0 18.8 0.5 320 chr2R 8531883 5` UTR mtt - chr2R 8532043 5` UTR mtt - chr2R 8532203 5` UTR mtt - chr2R_10_8530001 chr2R_8530001 RAL-307_125b 996 chr2R 8531907 8531939 chr2R 8532178 8532236 18 297 16.5 11.0 13.8 1.2 329 chr2R 8531907 5` UTR mtt - chr2R 8532072 5` UTR mtt - chr2R 8532236 5` UTR mtt - chr2R_18_8530001 chr2R_8530001 RAL-307_125b 997 chr2R 8722719 8722790 chr2R 8723010 8723036 pogo 31 278 12.0 5.0 8.5 3.3 317 chr2R 8722719 intron CG14767 - chr2R 8722878 intron CG14767 - chr2R 8723036 intron CG14767 - chr2R_31_8720001 chr2R_8720001 RAL-307_125b 998 chr2R 8777875 8777945 chr2R 8784129 8784174 diver 23 6252 8.0 10.5 9.2 2.3 6299 chr2R 8777875 intergenic not near genes chr2R 8781024 intergenic not near genes chr2R 8784174 intergenic not near genes chr2R_23_8780001 chr2R_8780001 RAL-307_125b 999 chr2R 8799243 8799279 chr2R 8799410 8799476 8 183 7.0 3.5 5.2 1.3 233 chr2R 8799243 intron sns + chr2R 8799360 intron sns + chr2R 8799476 intron sns + chr2R_8_8795001 chr2R_8795001 RAL-307_125b 1000 chr2R 8822242 8822314 chr2R 8822375 8822447 31 132 8.5 4.0 6.2 4.3 205 chr2R 8822242 intron sns + chr2R 8822344 intron sns + chr2R 8822447 intron sns + chr2R_31_8820001 chr2R_8820001 RAL-307_125b 1001 chr2R 8960408 8960475 chr2R 8960610 8960677 23 201 9.0 11.5 10.2 2.1 269 chr2R 8960408 exon babo + chr2R 8960542 3` UTR babo + chr2R 8960677 3` UTR babo + chr2R_23_8960001 chr2R_8960001 RAL-307_125b 1002 chr2R 8967667 8967684 chr2R 8967834 8967851 8 167 16.0 4.5 10.2 0.7 184 chr2R 8967667 intron CG8216 - chr2R 8967759 intron CG8216 - chr2R 8967851 intron CG8216 - chr2R_8_8965001 chr2R_8965001 RAL-307_125b 1003 chr2R 8969766 8969835 chr2R 8969902 8969976 23 138 13.5 7.0 10.2 2.1 210 chr2R 8969766 3` UTR CG8213 - chr2R 8969871 3` UTR CG8213 - chr2R 8969976 3` UTR CG8213 - chr2R_23_8965001 chr2R_8965001 RAL-307_125b 1004 chr2R 8976569 8976638 chr2R 8976698 8976760 12 121 5.5 9.5 7.5 1.4 191 chr2R 8976569 intron CG8213 - chr2R 8976664 intron CG8213 - chr2R 8976760 intron CG8213 - chr2R_12_8975001 chr2R_8975001 RAL-307_125b 1005 chr2R 9047371 9047438 chr2R 9047516 9047583 20 145 10.0 9.0 9.5 1.9 212 chr2R 9047371 intron CG13743 - chr2R 9047477 intron CG13743 - chr2R 9047583 intron CG13743 - chr2R_20_9045001 chr2R_9045001 RAL-307_125b 1006 chr2R 9052655 9052726 chr2R 9052784 9052857 22 127 7.5 10.0 8.8 2.2 202 chr2R 9052655 intron CG13743 - chr2R 9052756 intron CG13743 - chr2R 9052857 intron CG13743 - chr2R_22_9050001 chr2R_9050001 RAL-307_125b 1007 chr2R 9055646 9055671 chr2R 9056001 9056026 12 355 18.0 11.5 14.8 0.8 380 chr2R 9055646 intron CG13743 - chr2R 9055836 intron CG13743 - chr2R 9056026 intron CG13743 - chr2R_12_9055001 chr2R_9055001 RAL-307_125b 1008 chr2R 9055674 9055678 chr2R 9055996 9056033 9 348 17.0 9.5 13.2 0.6 359 chr2R 9055674 intron CG13743 - chr2R 9055854 intron CG13743 - chr2R 9056033 intron CG13743 - chr2R_9_9055001 chr2R_9055001 RAL-307_125b 1009 chr2R 9055682 9055711 chr2R 9055987 9056066 14 342 9.5 7.0 8.2 1.5 384 chr2R 9055682 intron CG13743 - chr2R 9055874 intron CG13743 - chr2R 9056066 intron CG13743 - chr2R_14_9055001 chr2R_9055001 RAL-307_125b 1010 chr2R 9078438 9078458 chr2R 9078566 9078583 12 128 14.0 8.5 11.2 1.0 145 chr2R 9078438 intergenic CG8083 + chr2R 9078510 intergenic CG8083 + chr2R 9078583 intergenic CG8083 + chr2R_12_9075001 chr2R_9075001 RAL-307_125b 1011 chr2R 9078461 9078498 chr2R 9078563 9078625 20 127 10.5 8.5 9.5 1.9 164 chr2R 9078461 intergenic CG8083 + chr2R 9078543 intergenic CG8083 + chr2R 9078625 intergenic CG8083 + chr2R_20_9075001 chr2R_9075001 RAL-307_125b 1012 chr2R 9151259 9151267 chr2R 9157779 9157787 Burdock 5 6520 29.0 10.5 19.8 0.2 6528 chr2R 9151259 exon CG30345 + chr2R 9154523 intergenic not near genes chr2R 9157787 intergenic CG8008 - chr2R_5_9150001 chr2R_9150001 RAL-307_125b 1013 chr2R 9151269 9151331 chr2R 9157774 9157851 Burdock 25 6518 11.0 10.0 10.5 2.2 6582 chr2R 9151269 exon CG30345 + chr2R 9154560 intergenic not near genes chr2R 9157851 intergenic CG8008 - chr2R_25_9150001 chr2R_9150001 RAL-307_125b 1014 chr2R 9212653 9212711 chr2R 9213189 9213206 roo 10 528 8.0 6.5 7.2 1.2 553 chr2R 9212653 intergenic CR45309 + chr2R 9212930 intergenic CR45309 + chr2R 9213206 5` UTR CR45309 + chr2R_10_9210001 chr2R_9210001 RAL-307_125b 1015 chr2R 9227829 9227896 chr2R 9227966 9228017 26 134 10.5 6.0 8.2 2.8 188 chr2R 9227829 3` UTR hig - chr2R 9227923 3` UTR hig - chr2R 9228017 3` UTR hig - chr2R_26_9225001 chr2R_9225001 RAL-307_125b 1016 chr2R 9270994 9271000 chr2R 9271121 9271127 6 127 0.5 8.5 4.5 1.1 133 chr2R 9270994 intron Pkn - chr2R 9271060 intron Pkn - chr2R 9271127 intron Pkn - chr2R_6_9270001 chr2R_9270001 RAL-307_125b 1017 chr2R 9271003 9271059 chr2R 9271120 9271186 22 126 0.0 8.0 4.0 4.4 183 chr2R 9271003 intron Pkn - chr2R 9271094 intron Pkn - chr2R 9271186 intron Pkn - chr2R_22_9270001 chr2R_9270001 RAL-307_125b 1018 chr2R 9325461 9325493 chr2R 9325605 9325627 7 142 0.5 7.0 3.8 1.5 166 chr2R 9325461 intron,intron CG13739 -,CG13954 - chr2R 9325544 intron,intron CG13739 -,CG13954 - chr2R 9325627 intron,intron CG13739 -,CG13954 - chr2R_7_9325001 chr2R_9325001 RAL-307_125b 1019 chr2R 9352253 9352256 chr2R 9361444 9361456 roo 4 9196 10.0 12.0 11.0 0.3 9203 chr2R 9352253 intron CG13954 - chr2R 9356854 intron CG13954 - chr2R 9361456 intron CG13954 - chr2R_4_9355001 chr2R_9355001 RAL-307_125b 1020 chr2R 9408178 9408252 chr2R 9408311 9408385 40 130 11.5 9.0 10.2 3.6 207 chr2R 9408178 intron wun - chr2R 9408282 intron wun - chr2R 9408385 intron wun - chr2R_40_9405001 chr2R_9405001 RAL-307_125b 1021 chr2R 9480031 9480082 chr2R 9490612 9490653 roo 15 10580 12.5 10.5 11.5 1.2 10622 chr2R 9480031 intergenic not near genes chr2R 9485342 intergenic not near genes chr2R 9490653 intergenic not near genes chr2R_15_9485001 chr2R_9485001 RAL-307_125b 1022 chr2R 9510622 9510697 chr2R 9510779 9510863 18 159 3.0 3.0 3.0 4.5 241 chr2R 9510622 exon brp + chr2R 9510742 intron brp + chr2R 9510863 exon brp + chr2R_18_9510001 chr2R_9510001 RAL-307_125b 1023 chr2R 9558386 9558425 chr2R 9561295 9561376 23 2916 41.5 81.5 61.5 0.4 2990 chr2R 9558386 intergenic not near genes chr2R 9559881 3` UTR,exon CR45281 -,Or45b + chr2R 9561376 3` UTR CR45281 - chr2R_23_9555001 chr2R_9555001 RAL-307_125b 1024 chr2R 9605790 9605858 chr2R 9605938 9606015 27 155 11.5 9.5 10.5 2.3 225 chr2R 9605790 3` UTR CR44285 - chr2R 9605902 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9606015 5` UTR GstT1 + chr2R_27_9605001 chr2R_9605001 RAL-307_125b 1025 chr2R 9618522 9618535 chr2R 9618800 9618813 8 278 19.0 1.5 10.2 0.7 291 chr2R 9618522 intron Mmp2 - chr2R 9618668 intron Mmp2 - chr2R 9618813 intron Mmp2 - chr2R_8_9615001 chr2R_9615001 RAL-307_125b 1026 chr2R 9687196 9687217 chr2R 9687328 9687331 15 131 17.0 14.0 15.5 0.9 135 chr2R 9687196 intergenic not near genes chr2R 9687264 intergenic not near genes chr2R 9687331 intergenic not near genes chr2R_15_9685001 chr2R_9685001 RAL-307_125b 1027 chr2R 9687219 9687264 chr2R 9687321 9687396 24 130 8.5 15.0 11.8 1.9 177 chr2R 9687219 intergenic not near genes chr2R 9687308 intergenic not near genes chr2R 9687396 intergenic not near genes chr2R_24_9685001 chr2R_9685001 RAL-307_125b 1028 chr2R 9726568 9726635 chr2R 9734171 9734238 17.6 23 7601 9.0 12.0 10.5 2.0 7670 chr2R 9726568 intron sqa - chr2R 9730403 intron sqa - chr2R 9734238 intron sqa - chr2R_23_9730001 chr2R_9730001 RAL-307_125b 1029 chr2R 9776399 9776462 chr2R 9776548 9776611 33 144 13.5 13.5 13.5 2.3 212 chr2R 9776399 intron CG1688 - chr2R 9776505 intron CG1688 - chr2R 9776611 intron CG1688 - chr2R_33_9775001 chr2R_9775001 RAL-307_125b 1030 chr2R 9805402 9805437 chr2R 9805533 9805568 23 131 0.0 12.5 6.2 3.2 166 chr2R 9805402 intron CG1688 - chr2R 9805485 intron CG1688 - chr2R 9805568 intron CG1688 - chr2R_23_9805001 chr2R_9805001 RAL-307_125b 1031 chr2R 9862710 9862784 chr2R 9862836 9862910 38 123 9.0 12.0 10.5 3.3 200 chr2R 9862710 intergenic not near genes chr2R 9862810 intergenic not near genes chr2R 9862910 intergenic not near genes chr2R_38_9860001 chr2R_9860001 RAL-307_125b 1032 chr2R 9871048 9871054 chr2R 9871569 9871574 roo 4 527 3.0 19.0 11.0 0.3 526 chr2R 9871048 intron cbx - chr2R 9871311 intron cbx - chr2R 9871574 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-307_125b 1033 chr2R 9871056 9871062 chr2R 9871562 9871598 roo 6 525 0.5 17.5 9.0 0.6 542 chr2R 9871056 intron cbx - chr2R 9871327 intron cbx - chr2R 9871598 intron,5` UTR cbx -,CG18446 + chr2R_6_9870001 chr2R_9870001 RAL-307_125b 1034 chr2R 9871063 9871071 chr2R 9871542 9871607 roo 5 515 0.0 14.5 7.2 0.6 544 chr2R 9871063 intron cbx - chr2R 9871335 intron cbx - chr2R 9871607 intron,5` UTR cbx -,CG18446 + chr2R_5_9870001 chr2R_9870001 RAL-307_125b 1035 chr2R 9921159 9921166 chr2R 9921339 9921346 4 180 6.0 19.0 12.5 0.3 187 chr2R 9921159 intron Mef2 - chr2R 9921252 intron Mef2 - chr2R 9921346 intron Mef2 - chr2R_4_9920001 chr2R_9920001 RAL-307_125b 1036 chr2R 9923809 9923842 chr2R 9923941 9923948 16 128 17.5 6.0 11.8 1.2 139 chr2R 9923809 intron Mef2 - chr2R 9923878 intron Mef2 - chr2R 9923948 intron Mef2 - chr2R_16_9920001 chr2R_9920001 RAL-307_125b 1037 chr2R 9923845 9923879 chr2R 9923938 9924008 18 117 10.0 6.0 8.0 2.0 163 chr2R 9923845 intron Mef2 - chr2R 9923926 intron Mef2 - chr2R 9924008 intron Mef2 - chr2R_18_9920001 chr2R_9920001 RAL-307_125b 1038 chr2R 9945397 9945405 chr2R 9945643 9945651 BS 5 246 28.5 10.5 19.5 0.2 254 chr2R 9945397 intron Mef2 - chr2R 9945524 intron Mef2 - chr2R 9945651 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-307_125b 1039 chr2R 9945406 9945430 chr2R 9945639 9945676 BS 9 243 24.0 10.5 17.2 0.5 270 chr2R 9945406 intron Mef2 - chr2R 9945541 intron Mef2 - chr2R 9945676 intron Mef2 - chr2R_9_9945001 chr2R_9945001 RAL-307_125b 1040 chr2R 9945432 9945463 chr2R 9945635 9945709 BS 16 238 13.0 9.5 11.2 1.3 277 chr2R 9945432 intron Mef2 - chr2R 9945570 intron Mef2 - chr2R 9945709 intron Mef2 - chr2R_16_9945001 chr2R_9945001 RAL-307_125b 1041 chr2R 10005804 10005837 chr2R 10007018 10007052 1360 14 1208 15.5 7.0 11.2 1.1 1248 chr2R 10005804 intron Pka-R2 - chr2R 10006428 intron Pka-R2 - chr2R 10007052 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 RAL-307_125b 1042 chr2R 10005839 10005873 chr2R 10007014 10007062 1360 9 1192 8.0 6.5 7.2 1.1 1223 chr2R 10005839 intron Pka-R2 - chr2R 10006450 intron Pka-R2 - chr2R 10007062 intron Pka-R2 - chr2R_9_10005001 chr2R_10005001 RAL-307_125b 1043 chr2R 10122691 10122749 chr2R 10122951 10123009 32 258 16.5 13.5 15.0 2.0 318 chr2R 10122691 intergenic Ccs - chr2R 10122850 intergenic Ccs - chr2R 10123009 intergenic Ccs - chr2R_32_10120001 chr2R_10120001 RAL-307_125b 1044 chr2R 10132142 10132215 chr2R 10132272 10132345 19 129 5.5 5.5 5.5 2.9 203 chr2R 10132142 exon gem + chr2R 10132244 intron gem + chr2R 10132345 exon gem + chr2R_19_10130001 chr2R_10130001 RAL-307_125b 1045 chr2R 10168328 10168361 chr2R 10168435 10168488 19 122 13.0 11.0 12.0 1.5 160 chr2R 10168328 intron KCNQ - chr2R 10168408 intron KCNQ - chr2R 10168488 intron KCNQ - chr2R_19_10165001 chr2R_10165001 RAL-307_125b 1046 chr2R 10170918 10171117 chr2R 10171068 10171251 4 146 18.5 2.5 10.5 0.3 333 chr2R 10170918 intron KCNQ - chr2R 10171084 intron KCNQ - chr2R 10171251 intron KCNQ - chr2R_4_10170001 chr2R_10170001 RAL-307_125b 1047 chr2R 10176073 10176154 chr2R 10176202 10176256 26 125 8.0 8.5 8.2 2.8 183 chr2R 10176073 intron KCNQ - chr2R 10176164 intron KCNQ - chr2R 10176256 intron KCNQ - chr2R_26_10175001 chr2R_10175001 RAL-307_125b 1048 chr2R 10176836 10176911 chr2R 10186053 10186128 roo 33 9216 10.0 10.5 10.2 2.9 9292 chr2R 10176836 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186128 intron KCNQ - chr2R_33_10180001 chr2R_10180001 RAL-307_125b 1049 chr2R 10194352 10194402 chr2R 10194547 10194597 18 192 54.5 26.5 40.5 0.4 245 chr2R 10194352 intergenic not near genes chr2R 10194474 intergenic not near genes chr2R 10194597 intergenic not near genes chr2R_18_10190001 chr2R_10190001 RAL-307_125b 1050 chr2R 10197340 10197413 chr2R 10197476 10197549 50 135 45.5 44.0 44.8 1.1 209 chr2R 10197340 3` UTR CG34221 - chr2R 10197444 3` UTR CG34221 - chr2R 10197549 3` UTR CG34221 - chr2R_50_10195001 chr2R_10195001 RAL-307_125b 1051 chr2R 10214519 10214532 chr2R 10214686 10214698 6 166 19.0 19.0 19.0 0.3 179 chr2R 10214519 intron,intron CG12912 -,Hr46 - chr2R 10214608 intron,intron CG12912 -,Hr46 - chr2R 10214698 intron,intron CG12912 -,Hr46 - chr2R_6_10210001 chr2R_10210001 RAL-307_125b 1052 chr2R 10221158 10221217 chr2R 10221315 10221372 28 156 12.5 7.5 10.0 2.5 214 chr2R 10221158 intron,intron CG12912 -,Hr46 - chr2R 10221265 intron,intron CG12912 -,Hr46 - chr2R 10221372 intron,intron CG12912 -,Hr46 - chr2R_28_10220001 chr2R_10220001 RAL-307_125b 1053 chr2R 10221223 10221238 chr2R 10221377 10221395 7 157 8.0 23.5 15.8 0.4 172 chr2R 10221223 intron,intron CG12912 -,Hr46 - chr2R 10221309 intron,intron CG12912 -,Hr46 - chr2R 10221395 intron,intron CG12912 -,Hr46 - chr2R_7_10220001 chr2R_10220001 RAL-307_125b 1054 chr2R 10222141 10222155 chr2R 10222269 10222283 10 128 7.0 14.5 10.8 0.8 142 chr2R 10222141 intron,intron CG12912 -,Hr46 - chr2R 10222212 intron,intron CG12912 -,Hr46 - chr2R 10222283 intron,intron CG12912 -,Hr46 - chr2R_10_10220001 chr2R_10220001 RAL-307_125b 1055 chr2R 10239866 10239901 chr2R 10239994 10240029 15 126 14.0 4.0 9.0 1.5 163 chr2R 10239866 intron Hdc + chr2R 10239948 intron Hdc + chr2R 10240029 intron Hdc + chr2R_15_10235001 chr2R_10235001 RAL-307_125b 1056 chr2R 10257141 10257192 chr2R 10257448 10257499 24 307 8.5 9.5 9.0 2.4 358 chr2R 10257141 intron CG12911 + chr2R 10257320 intron CG12911 + chr2R 10257499 intron CG12911 + chr2R_24_10255001 chr2R_10255001 RAL-307_125b 1057 chr2R 10263115 10263134 chr2R 10263248 10263250 4 129 0.5 1.5 1.0 2.0 135 chr2R 10263115 3` UTR CR30009 - chr2R 10263182 3` UTR CR30009 - chr2R 10263250 3` UTR CR30009 - chr2R_4_10260001 chr2R_10260001 RAL-307_125b 1058 chr2R 10270538 10270594 chr2R 10270672 10270714 13 136 7.5 11.0 9.2 1.3 176 chr2R 10270538 intron CAP + chr2R 10270626 intron CAP + chr2R 10270714 intron CAP + chr2R_13_10270001 chr2R_10270001 RAL-307_125b 1059 chr2R 10313298 10313336 chr2R 10313436 10313474 24 138 6.5 11.5 9.0 2.4 176 chr2R 10313298 intergenic not near genes chr2R 10313386 intergenic not near genes chr2R 10313474 intergenic Ndg + chr2R_24_10310001 chr2R_10310001 RAL-307_125b 1060 chr2R 10322032 10322078 chr2R 10322164 10322210 24 132 8.5 11.5 10.0 2.2 178 chr2R 10322032 3` UTR Ndg + chr2R 10322121 intergenic Ndg + chr2R 10322210 intergenic Ndg + chr2R_24_10320001 chr2R_10320001 RAL-307_125b 1061 chr2R 10352624 10352704 chr2R 10352751 10352791 33 122 20.5 19.0 19.8 1.6 167 chr2R 10352624 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352708 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352791 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_33_10350001 chr2R_10350001 RAL-307_125b 1062 chr2R 10369948 10370020 chr2R 10370118 10370169 47 164 8.0 14.5 11.2 3.9 221 chr2R 10369948 intron CG42732 - chr2R 10370058 intron CG42732 - chr2R 10370169 intron CG42732 - chr2R_47_10370001 chr2R_10370001 RAL-307_125b 1063 chr2R 10372654 10372682 chr2R 10372786 10372814 6 128 7.0 4.0 5.5 0.9 160 chr2R 10372654 intron CG42732 - chr2R 10372734 intron CG42732 - chr2R 10372814 intron CG42732 - chr2R_6_10370001 chr2R_10370001 RAL-307_125b 1064 chr2R 10409010 10409085 chr2R 10409137 10409211 41 127 0.0 11.5 5.8 6.0 201 chr2R 10409010 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409211 intron,exon CG42732 -,CG33477 - chr2R_41_10405001 chr2R_10405001 RAL-307_125b 1065 chr2R 10454053 10454121 chr2R 10454180 10454248 35 123 13.5 13.5 13.5 2.4 195 chr2R 10454053 intron,intron Galphao +,Cyp49a1 - chr2R 10454150 intron,intron Galphao +,Cyp49a1 - chr2R 10454248 intron,intron Galphao +,Cyp49a1 - chr2R_35_10450001 chr2R_10450001 RAL-307_125b 1066 chr2R 10468979 10469052 chr2R 10469155 10469223 30 175 7.0 6.0 6.5 4.0 244 chr2R 10468979 intron CG11777 + chr2R 10469101 intron CG11777 + chr2R 10469223 exon CG11777 + chr2R_30_10465001 chr2R_10465001 RAL-307_125b 1067 chr2R 10478773 10478812 chr2R 10478869 10478876 10 116 11.5 9.5 10.5 0.9 103 chr2R 10478773 5` UTR CR45134 + chr2R 10478824 intergenic CR45134 +,trsn -,whd - chr2R 10478876 intergenic CR45134 +,trsn -,whd - chr2R_10_10475001 chr2R_10475001 RAL-307_125b 1068 chr2R 10485876 10485924 chr2R 10486005 10486032 14 128 8.0 0.0 4.0 2.8 156 chr2R 10485876 intron lola - chr2R 10485954 intron lola - chr2R 10486032 intron lola - chr2R_14_10485001 chr2R_10485001 RAL-307_125b 1069 chr2R 10506281 10506332 chr2R 10506444 10506511 15 171 0.0 11.5 5.8 2.2 230 chr2R 10506281 intron lola - chr2R 10506396 intron lola - chr2R 10506511 intron lola - chr2R_15_10505001 chr2R_10505001 RAL-307_125b 1070 chr2R 10563905 10563915 chr2R 10564128 10564156 5 237 0.0 8.0 4.0 1.0 251 chr2R 10563905 intron psq + chr2R 10564030 intron psq + chr2R 10564156 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-307_125b 1071 chr2R 10571972 10571978 chr2R 10572214 10572214 4 240 24.5 2.5 13.5 0.3 242 chr2R 10571972 intron psq + chr2R 10572093 intron psq + chr2R 10572214 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-307_125b 1072 chr2R 10571983 10572037 chr2R 10572208 10572259 20 238 9.0 2.0 5.5 3.1 276 chr2R 10571983 intron psq + chr2R 10572121 intron psq + chr2R 10572259 intron psq + chr2R_20_10570001 chr2R_10570001 RAL-307_125b 1073 chr2R 10582066 10582147 chr2R 10582211 10582302 20 138 9.5 0.5 5.0 3.3 236 chr2R 10582066 intron psq + chr2R 10582184 intron psq + chr2R 10582302 intron psq + chr2R_20_10580001 chr2R_10580001 RAL-307_125b 1074 chr2R 10608955 10608992 chr2R 10609078 10609125 4 126 10.0 1.5 5.8 0.6 170 chr2R 10608955 intron psq + chr2R 10609040 intron psq + chr2R 10609125 intron psq + chr2R_4_10605001 chr2R_10605001 RAL-307_125b 1075 chr2R 10622310 10622355 chr2R 10637124 10637144 mdg1 7 14810 16.5 6.5 11.5 0.6 14834 chr2R 10622310 intron CG11883 + chr2R 10629727 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_7_10625001 chr2R_10625001 RAL-307_125b 1076 chr2R 10653157 10653180 chr2R 10653288 10653311 10 127 28.5 14.0 21.2 0.5 154 chr2R 10653157 intergenic not near genes chr2R 10653234 intergenic not near genes chr2R 10653311 intergenic not near genes chr2R_10_10650001 chr2R_10650001 RAL-307_125b 1077 chr2R 10653182 10653236 chr2R 10653282 10653290 23 110 11.5 12.5 12.0 1.8 108 chr2R 10653182 intergenic not near genes chr2R 10653236 intergenic not near genes chr2R 10653290 intergenic not near genes chr2R_23_10650001 chr2R_10650001 RAL-307_125b 1078 chr2R 10659004 10659050 chr2R 10666669 10666715 mdg1 15 7665 0.0 8.5 4.2 2.9 7711 chr2R 10659004 intergenic not near genes chr2R 10662860 intergenic not near genes chr2R 10666715 intergenic not near genes chr2R_15_10660001 chr2R_10660001 RAL-307_125b 1079 chr2R 10669816 10669860 chr2R 10669955 10669999 10 139 5.5 2.0 3.8 2.1 183 chr2R 10669816 intergenic not near genes chr2R 10669908 intergenic not near genes chr2R 10669999 intergenic not near genes chr2R_10_10665001 chr2R_10665001 RAL-307_125b 1080 chr2R 10671216 10671256 chr2R 10671328 10671337 4 100 7.0 1.0 4.0 0.8 121 chr2R 10671216 intergenic not near genes chr2R 10671276 intergenic not near genes chr2R 10671337 intergenic not near genes chr2R_4_10670001 chr2R_10670001 RAL-307_125b 1081 chr2R 10672688 10672760 chr2R 10672824 10672963 10 191 3.0 0.0 1.5 4.0 275 chr2R 10672688 intergenic not near genes chr2R 10672826 intergenic not near genes chr2R 10672963 intergenic stan + chr2R_10_10670001 chr2R_10670001 RAL-307_125b 1082 chr2R 10757660 10757715 chr2R 10757797 10757852 28 136 1.5 17.5 9.5 2.7 192 chr2R 10757660 intron CG33144 - chr2R 10757756 intron CG33144 - chr2R 10757852 intron CG33144 - chr2R_28_10755001 chr2R_10755001 RAL-307_125b 1083 chr2R 10758770 10758820 chr2R 10758892 10758962 29 139 8.0 8.0 8.0 3.2 192 chr2R 10758770 intron CG33144 - chr2R 10758866 intron CG33144 - chr2R 10758962 intron CG33144 - chr2R_29_10755001 chr2R_10755001 RAL-307_125b 1084 chr2R 10761517 10761588 chr2R 10761712 10761775 34 201 7.5 8.0 7.8 3.9 258 chr2R 10761517 intron,5` UTR CG33144 -,CR43605 + chr2R 10761646 intron,5` UTR CG33144 -,CR43605 + chr2R 10761775 intron CG33144 - chr2R_34_10760001 chr2R_10760001 RAL-307_125b 1085 chr2R 10790099 10790173 chr2R 10790237 10790292 34 135 12.5 12.0 12.2 2.6 193 chr2R 10790099 intron CG33144 - chr2R 10790196 intron CG33144 - chr2R 10790292 intron CG33144 - chr2R_34_10790001 chr2R_10790001 RAL-307_125b 1086 chr2R 10795969 10796001 chr2R 10796101 10796133 18 127 19.0 9.5 14.2 1.2 164 chr2R 10795969 intron CG33144 - chr2R 10796051 intron CG33144 - chr2R 10796133 intron CG33144 - chr2R_18_10795001 chr2R_10795001 RAL-307_125b 1087 chr2R 10796002 10796034 chr2R 10796089 10796163 15 128 8.0 9.5 8.8 1.5 161 chr2R 10796002 intron CG33144 - chr2R 10796082 intron CG33144 - chr2R 10796163 intron CG33144 - chr2R_15_10795001 chr2R_10795001 RAL-307_125b 1088 chr2R 10809340 10809363 chr2R 10809551 10809575 13 210 11.0 6.0 8.5 1.4 235 chr2R 10809340 intergenic CG12935 +,wde - chr2R 10809458 5` UTR CG12935 + chr2R 10809575 5` UTR CG12935 + chr2R_13_10805001 chr2R_10805001 RAL-307_125b 1089 chr2R 10809364 10809401 chr2R 10809550 10809612 19 206 7.0 5.5 6.2 2.6 248 chr2R 10809364 intergenic CG12935 +,wde - chr2R 10809488 5` UTR CG12935 + chr2R 10809612 5` UTR CG12935 + chr2R_19_10805001 chr2R_10805001 RAL-307_125b 1090 chr2R 10827288 10827295 chr2R 10827426 10827433 4 137 21.5 10.5 16.0 0.2 145 chr2R 10827288 exon CG12325 + chr2R 10827360 exon CG12325 + chr2R 10827433 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_4_10825001 chr2R_10825001 RAL-307_125b 1091 chr2R 10827298 10827357 chr2R 10827421 10827495 22 134 10.0 9.5 9.8 2.0 197 chr2R 10827298 exon CG12325 + chr2R 10827396 3` UTR CG12325 + chr2R 10827495 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_22_10825001 chr2R_10825001 RAL-307_125b 1092 chr2R 10911885 10911963 chr2R 10912021 10912099 41 135 7.5 14.0 10.8 3.5 214 chr2R 10911885 intergenic not near genes chr2R 10911992 intergenic not near genes chr2R 10912099 intergenic not near genes chr2R_41_10910001 chr2R_10910001 RAL-307_125b 1093 chr2R 10913557 10913589 chr2R 10914215 10914244 5 656 10.5 4.5 7.5 0.6 687 chr2R 10913557 intergenic not near genes chr2R 10913900 intergenic not near genes chr2R 10914244 intergenic not near genes chr2R_5_10910001 chr2R_10910001 RAL-307_125b 1094 chr2R 10932458 10932531 chr2R 10932713 10932761 22 245 7.5 7.0 7.2 2.7 303 chr2R 10932458 intergenic not near genes chr2R 10932610 intergenic not near genes chr2R 10932761 intergenic not near genes chr2R_22_10930001 chr2R_10930001 RAL-307_125b 1095 chr2R 10948012 10948060 chr2R 10955600 10955616 17.6 21 7594 0.5 9.5 5.0 3.5 7604 chr2R 10948012 intergenic not near genes chr2R 10951814 intergenic not near genes chr2R 10955616 intergenic not near genes chr2R_21_10950001 chr2R_10950001 RAL-307_125b 1096 chr2R 10959041 10959106 chr2R 10959170 10959235 29 127 0.5 10.0 5.2 4.7 194 chr2R 10959041 intergenic not near genes chr2R 10959138 intergenic not near genes chr2R 10959235 intergenic not near genes chr2R_29_10955001 chr2R_10955001 RAL-307_125b 1097 chr2R 10968707 10968782 chr2R 10968831 10968912 30 127 6.5 6.5 6.5 4.0 205 chr2R 10968707 intergenic not near genes chr2R 10968810 intergenic not near genes chr2R 10968912 intergenic not near genes chr2R_30_10965001 chr2R_10965001 RAL-307_125b 1098 chr2R 10974956 10974963 chr2R 10975115 10975122 9 159 25.0 4.0 14.5 0.6 166 chr2R 10974956 intergenic not near genes chr2R 10975039 intergenic not near genes chr2R 10975122 intergenic not near genes chr2R_9_10975001 chr2R_10975001 RAL-307_125b 1099 chr2R 10979623 10979677 chr2R 10980142 10980199 297 7 521 6.0 8.5 7.2 0.9 576 chr2R 10979623 intergenic not near genes chr2R 10979911 intergenic not near genes chr2R 10980199 intergenic not near genes chr2R_7_10975001 chr2R_10975001 RAL-307_125b 1100 chr2R 11009779 11009842 chr2R 11019003 11019066 roo 34 9217 14.5 13.5 14.0 2.3 9287 chr2R 11009779 intron luna - chr2R 11014422 intron luna - chr2R 11019066 intron luna - chr2R_34_11010001 chr2R_11010001 RAL-307_125b 1101 chr2R 11019838 11019897 chr2R 11024954 11025003 jockey 20 5109 5.0 5.0 5.0 3.3 5165 chr2R 11019838 intron luna - chr2R 11022420 intron luna - chr2R 11025003 intron luna - chr2R_20_11020001 chr2R_11020001 RAL-307_125b 1102 chr2R 11064673 11064731 chr2R 11064806 11064864 29 131 3.0 8.5 5.8 4.3 191 chr2R 11064673 intron luna - chr2R 11064768 intron luna - chr2R 11064864 intron luna - chr2R_29_11060001 chr2R_11060001 RAL-307_125b 1103 chr2R 11097307 11097385 chr2R 11097462 11097540 20 149 7.5 13.5 10.5 1.7 233 chr2R 11097307 intron luna - chr2R 11097424 intron luna - chr2R 11097540 intron luna - chr2R_20_11095001 chr2R_11095001 RAL-307_125b 1104 chr2R 11129773 11129785 chr2R 11129905 11129918 7 133 15.0 9.0 12.0 0.5 145 chr2R 11129773 intergenic not near genes chr2R 11129846 intergenic not near genes chr2R 11129918 intergenic not near genes chr2R_7_11125001 chr2R_11125001 RAL-307_125b 1105 chr2R 11129787 11129843 chr2R 11129898 11129971 26 128 11.5 7.5 9.5 2.5 184 chr2R 11129787 intergenic not near genes chr2R 11129879 intergenic not near genes chr2R 11129971 intergenic not near genes chr2R_26_11125001 chr2R_11125001 RAL-307_125b 1106 chr2R 11134085 11134138 chr2R 11134376 11134429 pogo 29 291 12.5 14.5 13.5 2.0 344 chr2R 11134085 intergenic not near genes chr2R 11134257 intergenic not near genes chr2R 11134429 intergenic not near genes chr2R_29_11130001 chr2R_11130001 RAL-307_125b 1107 chr2R 11156233 11156237 chr2R 11157142 11157148 4 910 26.0 14.5 20.2 0.2 915 chr2R 11156233 intron CG13229 - chr2R 11156690 intron CG13229 - chr2R 11157148 intron CG13229 - chr2R_4_11155001 chr2R_11155001 RAL-307_125b 1108 chr2R 11156238 11156293 chr2R 11157133 11157204 33 908 9.5 12.0 10.8 2.8 966 chr2R 11156238 intron CG13229 - chr2R 11156721 intron CG13229 - chr2R 11157204 intron CG13229 - chr2R_33_11155001 chr2R_11155001 RAL-307_125b 1109 chr2R 11179217 11179292 chr2R 11179353 11179362 27 128 12.5 13.0 12.8 2.0 145 chr2R 11179217 intron shn + chr2R 11179290 intron shn + chr2R 11179362 intron shn + chr2R_27_11175001 chr2R_11175001 RAL-307_125b 1110 chr2R 11207783 11207807 chr2R 11208026 11208050 BS 16 241 18.0 21.5 19.8 0.8 267 chr2R 11207783 intron shn + chr2R 11207916 intron shn + chr2R 11208050 intron shn + chr2R_16_11205001 chr2R_11205001 RAL-307_125b 1111 chr2R 11207811 11207843 chr2R 11208009 11208045 BS 20 234 11.0 16.0 13.5 1.4 234 chr2R 11207811 intron shn + chr2R 11207928 intron shn + chr2R 11208045 intron shn + chr2R_20_11205001 chr2R_11205001 RAL-307_125b 1112 chr2R 11297591 11297636 chr2R 11301962 11302006 flea 25 4370 11.0 8.5 9.8 2.3 4415 chr2R 11297591 intergenic CG42336 - chr2R 11299798 intergenic not near genes chr2R 11302006 5` UTR CG7741 + chr2R_25_11295001 chr2R_11295001 RAL-307_125b 1113 chr2R 11307516 11307583 chr2R 11307656 11307735 13 144 5.0 0.0 2.5 3.7 219 chr2R 11307516 5` UTR Fpps - chr2R 11307626 intergenic Fpps -,CG7745 + chr2R 11307735 intergenic CG7745 +,Fpps - chr2R_13_11305001 chr2R_11305001 RAL-307_125b 1114 chr2R 11344103 11344109 chr2R 11344245 11344254 4 145 7.5 6.5 7.0 0.5 151 chr2R 11344103 intergenic alphaTry - chr2R 11344178 intergenic alphaTry - chr2R 11344254 intergenic alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-307_125b 1115 chr2R 11344110 11344159 chr2R 11344241 11344305 8 144 0.0 5.5 2.8 2.1 195 chr2R 11344110 intergenic alphaTry - chr2R 11344208 intergenic alphaTry - chr2R 11344305 3` UTR alphaTry - chr2R_8_11340001 chr2R_11340001 RAL-307_125b 1116 chr2R 11367979 11368042 chr2R 11368105 11368168 25 126 11.5 9.0 10.2 2.2 189 chr2R 11367979 intron CG13204 + chr2R 11368074 intron CG13204 + chr2R 11368168 intron CG13204 + chr2R_25_11365001 chr2R_11365001 RAL-307_125b 1117 chr2R 11404757 11404798 chr2R 11404894 11404934 11 137 15.0 19.5 17.2 0.6 177 chr2R 11404757 intergenic not near genes chr2R 11404846 intergenic not near genes chr2R 11404934 intergenic not near genes chr2R_11_11400001 chr2R_11400001 RAL-307_125b 1118 chr2R 11415495 11415551 chr2R 11418674 11418710 opus 25 3192 0.0 11.5 5.8 3.7 3215 chr2R 11415495 intron Drip - chr2R 11417102 intron Drip - chr2R 11418710 intron Drip - chr2R_25_11415001 chr2R_11415001 RAL-307_125b 1119 chr2R 11425659 11425666 chr2R 11425789 11425796 6 130 1.5 11.5 6.5 0.8 137 chr2R 11425659 intron Drip - chr2R 11425728 intron Drip - chr2R 11425796 intron Drip - chr2R_6_11425001 chr2R_11425001 RAL-307_125b 1120 chr2R 11425668 11425684 chr2R 11425762 11425814 7 121 2.0 6.0 4.0 1.4 146 chr2R 11425668 intron Drip - chr2R 11425741 intron Drip - chr2R 11425814 intron Drip - chr2R_7_11425001 chr2R_11425001 RAL-307_125b 1121 chr2R 11472603 11472678 chr2R 11473850 11473925 pogo 38 1244 7.5 13.5 10.5 3.3 1322 chr2R 11472603 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473925 intergenic not near genes chr2R_38_11470001 chr2R_11470001 RAL-307_125b 1122 chr2R 11494554 11494626 chr2R 11494691 11494765 29 137 8.0 11.0 9.5 2.8 211 chr2R 11494554 intron inv + chr2R 11494660 intron inv + chr2R 11494765 intron inv + chr2R_29_11490001 chr2R_11490001 RAL-307_125b 1123 chr2R 11503050 11503087 chr2R 11503281 11503325 15 246 7.5 5.0 6.2 2.1 275 chr2R 11503050 intron inv + chr2R 11503188 intron inv + chr2R 11503325 intron inv + chr2R_15_11500001 chr2R_11500001 RAL-307_125b 1124 chr2R 11547095 11547163 chr2R 11547772 11547800 16 666 3.5 7.0 5.2 2.6 705 chr2R 11547095 intergenic not near genes chr2R 11547448 intergenic not near genes chr2R 11547800 intergenic not near genes chr2R_16_11545001 chr2R_11545001 RAL-307_125b 1125 chr2R 11555452 11555518 chr2R 11555618 11555684 25 166 3.5 8.0 5.8 3.7 232 chr2R 11555452 intergenic not near genes chr2R 11555568 intergenic not near genes chr2R 11555684 intergenic not near genes chr2R_25_11555001 chr2R_11555001 RAL-307_125b 1126 chr2R 11575000 11575035 chr2R 11575149 11575180 7 145 0.5 14.5 7.5 0.8 180 chr2R 11575000 intergenic not near genes chr2R 11575090 intergenic not near genes chr2R 11575180 intergenic not near genes chr2R_7_11575001 chr2R_11575001 RAL-307_125b 1127 chr2R 11631326 11631411 chr2R 11631476 11631541 25 133 0.0 5.0 2.5 7.1 215 chr2R 11631326 intron CG9005 - chr2R 11631434 intron CG9005 - chr2R 11631541 intron CG9005 - chr2R_25_11630001 chr2R_11630001 RAL-307_125b 1128 chr2R 11672802 11672847 chr2R 11672938 11672983 15 135 7.0 6.0 6.5 2.0 181 chr2R 11672802 intron,exon Roc2 -,Tret1-1 + chr2R 11672892 intron,intron Roc2 -,Tret1-1 + chr2R 11672983 intron,intron Roc2 -,Tret1-1 + chr2R_15_11670001 chr2R_11670001 RAL-307_125b 1129 chr2R 11677845 11677897 chr2R 11677951 11678025 34 121 8.5 6.5 7.5 4.0 180 chr2R 11677845 intron,exon Roc2 -,Tret1-2 + chr2R 11677935 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11678025 intron Roc2 - chr2R_34_11675001 chr2R_11675001 RAL-307_125b 1130 chr2R 11733787 11733864 chr2R 11734016 11734081 24 222 8.5 1.0 4.8 4.1 294 chr2R 11733787 intergenic not near genes chr2R 11733934 intergenic not near genes chr2R 11734081 intergenic not near genes chr2R_24_11730001 chr2R_11730001 RAL-307_125b 1131 chr2R 11746444 11746526 chr2R 11746575 11746671 5 137 0.0 0.0 0.0 5.0 227 chr2R 11746444 intergenic not near genes chr2R 11746558 intergenic not near genes chr2R 11746671 intergenic not near genes chr2R_5_11745001 chr2R_11745001 RAL-307_125b 1132 chr2R 11826841 11826896 chr2R 11827003 11827058 24 161 8.5 9.0 8.8 2.4 217 chr2R 11826841 3` UTR CG13192 + chr2R 11826950 3` UTR CG13192 + chr2R 11827058 3` UTR CG13192 + chr2R_24_11825001 chr2R_11825001 RAL-307_125b 1133 chr2R 11839544 11839551 chr2R 11839632 11839639 4 100 17.0 11.0 14.0 0.3 95 chr2R 11839544 5` UTR Sobp - chr2R 11839592 5` UTR Sobp - chr2R 11839639 5` UTR Sobp - chr2R_4_11835001 chr2R_11835001 RAL-307_125b 1134 chr2R 11863808 11863887 chr2R 11863945 11864024 29 136 9.0 11.5 10.2 2.6 216 chr2R 11863808 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11864024 intergenic CG42531 + chr2R_29_11860001 chr2R_11860001 RAL-307_125b 1135 chr2R 11955329 11955378 chr2R 11955458 11955507 23 128 11.5 0.0 5.8 3.4 178 chr2R 11955329 intron CG13188 + chr2R 11955418 intron CG13188 + chr2R 11955507 intron CG13188 + chr2R_23_11955001 chr2R_11955001 RAL-307_125b 1136 chr2R 8518788 8518796 chr2R 12066132 12066185 7 3547362 45.0 16.0 30.5 0.2 3547397 chr2R 8518788 intron mtt - chr2R 10292486 intron CAP + chr2R 12066185 intron CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-307_125b 1137 chr2R 12103216 12103235 chr2R 12103534 12103553 4 318 15.5 7.5 11.5 0.3 337 chr2R 12103216 intron jeb - chr2R 12103384 intron jeb - chr2R 12103553 intron jeb - chr2R_4_12100001 chr2R_12100001 RAL-307_125b 1138 chr2R 12103236 12103292 chr2R 12103528 12103587 19 304 7.0 7.0 7.0 2.4 351 chr2R 12103236 intron jeb - chr2R 12103412 intron jeb - chr2R 12103587 intron jeb - chr2R_19_12100001 chr2R_12100001 RAL-307_125b 1139 chr2R 12104645 12104657 chr2R 12104769 12104785 5 127 16.0 6.5 11.2 0.4 140 chr2R 12104645 intron jeb - chr2R 12104715 intron jeb - chr2R 12104785 intron jeb - chr2R_5_12100001 chr2R_12100001 RAL-307_125b 1140 chr2R 12104664 12104701 chr2R 12104763 12104795 15 115 8.0 7.0 7.5 1.8 131 chr2R 12104664 intron jeb - chr2R 12104730 intron jeb - chr2R 12104795 intron jeb - chr2R_15_12100001 chr2R_12100001 RAL-307_125b 1141 chr2R 12185956 12186032 chr2R 12186101 12186147 78 141 13.5 29.5 21.5 3.5 191 chr2R 12185956 intron Cyp6g1 + chr2R 12186052 intron Cyp6g1 + chr2R 12186147 intron Cyp6g1 + chr2R_78_12185001 chr2R_12185001 RAL-307_125b 1142 chr2R 12185230 12185269 chr2R 12188105 12188144 18 2877 45.0 208.5 126.8 0.1 2914 chr2R 12185230 3` UTR,exon CG13175 +,CG33964 + chr2R 12186687 exon Cyp6g1 + chr2R 12188144 3` UTR Cyp6g1 + chr2R_18_12185001 chr2R_12185001 RAL-307_125b 1143 chr2R 12189354 12189400 chr2R 12189597 12189634 5 234 130.0 135.0 132.5 0.0 280 chr2R 12189354 exon Cyp6g2 - chr2R 12189494 exon Cyp6g2 - chr2R 12189634 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-307_125b 1144 chr2R 12187480 12187504 chr2R 12190057 12190070 14 2569 100.5 111.5 106.0 0.1 2590 chr2R 12187480 exon Cyp6g1 + chr2R 12188775 exon Cyp6g2 - chr2R 12190070 exon Cyp6g2 - chr2R_14_12185001 chr2R_12185001 RAL-307_125b 1145 chr2R 12187476 12187482 chr2R 12190072 12190124 76 2586 79.5 97.5 88.5 0.8 2648 chr2R 12187476 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_76_12185001 chr2R_12185001 RAL-307_125b 1146 chr2R 12210106 12210119 chr2R 12210222 12210228 8 126 11.5 6.0 8.8 0.8 122 chr2R 12210106 exon Sr-CII - chr2R 12210167 intron Sr-CII - chr2R 12210228 intron Sr-CII - chr2R_8_12210001 chr2R_12210001 RAL-307_125b 1147 chr2R 12210122 12210148 chr2R 12210214 12210279 13 125 10.0 5.5 7.8 1.5 157 chr2R 12210122 exon Sr-CII - chr2R 12210200 intron Sr-CII - chr2R 12210279 exon Sr-CII - chr2R_13_12210001 chr2R_12210001 RAL-307_125b 1148 chr2R 12236181 12236241 chr2R 12236322 12236382 21 138 8.0 5.5 6.8 2.7 201 chr2R 12236181 intergenic not near genes chr2R 12236282 intergenic not near genes chr2R 12236382 intergenic not near genes chr2R_21_12235001 chr2R_12235001 RAL-307_125b 1149 chr2R 12240730 12240774 chr2R 12240855 12240909 8 130 7.0 0.0 3.5 1.8 179 chr2R 12240730 exon CG13170 + chr2R 12240820 intergenic CG13170 +,CG43315 + chr2R 12240909 intergenic CG13170 +,CG43315 + chr2R_8_12240001 chr2R_12240001 RAL-307_125b 1150 chr2R 12255673 12255742 chr2R 12255842 12255911 27 169 8.5 8.5 8.5 2.8 238 chr2R 12255673 3` UTR CG13168 + chr2R 12255792 intergenic CG13168 + chr2R 12255911 intergenic CG13168 + chr2R_27_12255001 chr2R_12255001 RAL-307_125b 1151 chr2R 12279009 12279056 chr2R 12279172 12279219 20 163 10.0 12.0 11.0 1.7 210 chr2R 12279009 intergenic Cam + chr2R 12279114 intergenic Cam + chr2R 12279219 intergenic Cam + chr2R_20_12275001 chr2R_12275001 RAL-307_125b 1152 chr2R 12334841 12334882 chr2R 12334969 12334969 7 122 16.5 8.0 12.2 0.5 128 chr2R 12334841 intergenic CG8490 + chr2R 12334905 intergenic CG8490 + chr2R 12334969 intergenic CG8490 + chr2R_7_12330001 chr2R_12330001 RAL-307_125b 1153 chr2R 12363342 12363417 chr2R 12363824 12363891 31 478 9.0 0.0 4.5 5.6 549 chr2R 12363342 intergenic CG30043 + chr2R 12363616 intergenic CG30043 + chr2R 12363891 intergenic not near genes chr2R_31_12360001 chr2R_12360001 RAL-307_125b 1154 chr2R 12385289 12385377 chr2R 12385424 12385479 18 125 1.5 1.0 1.2 8.2 190 chr2R 12385289 intergenic not near genes chr2R 12385384 intergenic not near genes chr2R 12385479 intergenic not near genes chr2R_18_12385001 chr2R_12385001 RAL-307_125b 1155 chr2R 12413118 12413127 chr2R 12413244 12413253 6 126 1.5 0.0 0.8 3.3 135 chr2R 12413118 intergenic not near genes chr2R 12413186 intergenic not near genes chr2R 12413253 intergenic not near genes chr2R_6_12410001 chr2R_12410001 RAL-307_125b 1156 chr2R 12481146 12481168 chr2R 12482958 12482978 roo 6 1830 4.0 10.0 7.0 0.8 1832 chr2R 12481146 exon Dh44-R2 + chr2R 12482062 intron Dh44-R2 + chr2R 12482978 intron Dh44-R2 + chr2R_6_12480001 chr2R_12480001 RAL-307_125b 1157 chr2R 12501649 12501664 chr2R 12503859 12503869 Rt1c 4 2209 15.5 9.5 12.5 0.3 2220 chr2R 12501649 intron fdl - chr2R 12502759 intron fdl - chr2R 12503869 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-307_125b 1158 chr2R 12501667 12501723 chr2R 12503858 12503895 Rt1c 10 2197 4.5 9.0 6.8 1.3 2228 chr2R 12501667 intron fdl - chr2R 12502781 intron fdl - chr2R 12503895 intron fdl - chr2R_10_12500001 chr2R_12500001 RAL-307_125b 1159 chr2R 12535963 12536033 chr2R 12536106 12536142 37 128 8.5 8.5 8.5 3.9 179 chr2R 12535963 intron fra + chr2R 12536052 intron fra + chr2R 12536142 intron fra + chr2R_37_12535001 chr2R_12535001 RAL-307_125b 1160 chr2R 12565545 12565596 chr2R 12565944 12565995 16 399 0.0 7.0 3.5 3.6 450 chr2R 12565545 intergenic not near genes chr2R 12565770 intergenic Cyp301a1 + chr2R 12565995 intergenic Cyp301a1 + chr2R_16_12565001 chr2R_12565001 RAL-307_125b 1161 chr2R 12671401 12671405 chr2R 12671555 12671556 4 155 11.0 11.0 11.0 0.3 155 chr2R 12671401 intron CG42708 - chr2R 12671478 intron CG42708 - chr2R 12671556 exon CG42708 - chr2R_4_12670001 chr2R_12670001 RAL-307_125b 1162 chr2R 12700795 12700845 chr2R 12700906 12700934 14 125 4.0 6.0 5.0 2.3 139 chr2R 12700795 3` UTR wuc + chr2R 12700864 intergenic wuc + chr2R 12700934 intergenic wuc + chr2R_14_12700001 chr2R_12700001 RAL-307_125b 1163 chr2R 12707472 12707547 chr2R 12715888 12715963 roo 35 8415 7.0 3.5 5.2 5.6 8491 chr2R 12707472 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715963 intron CG42663 + chr2R_35_12710001 chr2R_12710001 RAL-307_125b 1164 chr2R 12777767 12777776 chr2R 12777908 12777917 4 141 10.0 14.5 12.2 0.3 150 chr2R 12777767 5` UTR CR45266 + chr2R 12777842 5` UTR CR45266 + chr2R 12777917 5` UTR CR45266 + chr2R_4_12775001 chr2R_12775001 RAL-307_125b 1165 chr2R 12789251 12789265 chr2R 12797664 12797669 roo 5 8411 19.5 5.0 12.2 0.4 8418 chr2R 12789251 intron,3` UTR sca +,CR45137 - chr2R 12793460 intron,intron sca +,CR45137 - chr2R 12797669 intron,3` UTR sca +,CR45137 - chr2R_5_12790001 chr2R_12790001 RAL-307_125b 1166 chr2R 12789270 12789327 chr2R 12797656 12797699 roo 18 8391 7.0 4.5 5.8 2.6 8429 chr2R 12789270 intron,3` UTR sca +,CR45137 - chr2R 12793484 intron,intron sca +,CR45137 - chr2R 12797699 intron,3` UTR sca +,CR45137 - chr2R_18_12790001 chr2R_12790001 RAL-307_125b 1167 chr2R 12819409 12819475 chr2R 12824521 12824594 jockey 21 5111 5.5 2.5 4.0 4.2 5185 chr2R 12819409 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824594 intergenic not near genes chr2R_21_12820001 chr2R_12820001 RAL-307_125b 1168 chr2R 12826665 12826685 chr2R 12826745 12826779 5 84 52.0 50.5 51.2 0.1 114 chr2R 12826665 intergenic not near genes chr2R 12826722 intergenic not near genes chr2R 12826779 intergenic not near genes chr2R_5_12825001 chr2R_12825001 RAL-307_125b 1169 chr2R 12845364 12845440 chr2R 12845495 12845567 27 125 9.0 3.0 6.0 3.9 203 chr2R 12845364 intergenic CG17575 - chr2R 12845466 intergenic CG17575 - chr2R 12845567 3` UTR CG17575 - chr2R_27_12845001 chr2R_12845001 RAL-307_125b 1170 chr2R 12856963 12856979 chr2R 12868317 12868333 accord 10 11357 28.0 16.0 22.0 0.4 11370 chr2R 12856963 intron CG17574 - chr2R 12862648 intron CG17574 - chr2R 12868333 intron,intron CG17574 -,CR45140 + chr2R_10_12860001 chr2R_12860001 RAL-307_125b 1171 chr2R 12897415 12897429 chr2R 12897555 12897569 12 141 9.0 0.0 4.5 2.2 154 chr2R 12897415 intron vg + chr2R 12897492 intron vg + chr2R 12897569 intron vg + chr2R_12_12895001 chr2R_12895001 RAL-307_125b 1172 chr2R 12897433 12897486 chr2R 12897553 12897627 8 134 0.0 0.0 0.0 8.0 194 chr2R 12897433 intron vg + chr2R 12897530 intron vg + chr2R 12897627 intron vg + chr2R_8_12895001 chr2R_12895001 RAL-307_125b 1173 chr2R 12908454 12908496 chr2R 12908595 12908636 14 139 1.5 9.5 5.5 2.2 182 chr2R 12908454 intergenic not near genes chr2R 12908545 intergenic not near genes chr2R 12908636 intergenic not near genes chr2R_14_12905001 chr2R_12905001 RAL-307_125b 1174 chr2R 12938611 12938631 chr2R 12939873 12939913 4 1256 31.5 24.0 27.8 0.1 1302 chr2R 12938611 exon Sans + chr2R 12939262 exon Sans + chr2R 12939913 exon Sans + chr2R_4_12935001 chr2R_12935001 RAL-307_125b 1175 chr2R 13027694 13027734 chr2R 13027823 13027863 19 129 12.0 1.5 6.8 2.4 169 chr2R 13027694 intergenic not near genes chr2R 13027778 intergenic not near genes chr2R 13027863 intergenic not near genes chr2R_19_13025001 chr2R_13025001 RAL-307_125b 1176 chr2R 13028694 13028741 chr2R 13031637 13031690 26 2944 3.0 13.0 8.0 2.9 2996 chr2R 13028694 intergenic not near genes chr2R 13030192 intergenic not near genes chr2R 13031690 intergenic not near genes chr2R_26_13030001 chr2R_13030001 RAL-307_125b 1177 chr2R 13043027 13043040 chr2R 13043137 13043170 10 127 0.0 4.5 2.2 3.1 143 chr2R 13043027 intergenic not near genes chr2R 13043098 intergenic not near genes chr2R 13043170 intergenic not near genes chr2R_10_13040001 chr2R_13040001 RAL-307_125b 1178 chr2R 13089703 13089744 chr2R 13089863 13089904 13 156 11.5 5.0 8.2 1.4 201 chr2R 13089703 intergenic not near genes chr2R 13089804 intergenic not near genes chr2R 13089904 intergenic not near genes chr2R_13_13085001 chr2R_13085001 RAL-307_125b 1179 chr2R 13093294 13093346 chr2R 13093429 13093481 25 135 8.5 10.5 9.5 2.4 187 chr2R 13093294 intergenic not near genes chr2R 13093388 intergenic not near genes chr2R 13093481 intergenic not near genes chr2R_25_13090001 chr2R_13090001 RAL-307_125b 1180 chr2R 13124390 13124412 chr2R 13124714 13124736 16 323 15.0 11.5 13.2 1.1 346 chr2R 13124390 exon CG13325 + chr2R 13124563 exon CG13325 + chr2R 13124736 intron CG13325 + chr2R_16_13120001 chr2R_13120001 RAL-307_125b 1181 chr2R 13124413 13124464 chr2R 13124713 13124777 22 319 5.5 11.5 8.5 2.3 364 chr2R 13124413 exon CG13325 + chr2R 13124595 exon CG13325 + chr2R 13124777 exon CG13325 + chr2R_22_13120001 chr2R_13120001 RAL-307_125b 1182 chr2R 13136795 13136860 chr2R 13141643 13141708 Doc 22 4839 5.0 6.0 5.5 3.4 4913 chr2R 13136795 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141708 intron Cap-G + chr2R_22_13135001 chr2R_13135001 RAL-307_125b 1183 chr2R 13167385 13167416 chr2R 13167529 13167560 15 144 20.0 0.0 10.0 1.4 175 chr2R 13167385 intron GLaz - chr2R 13167472 intron GLaz - chr2R 13167560 intron GLaz - chr2R_15_13165001 chr2R_13165001 RAL-307_125b 1184 chr2R 13167418 13167462 chr2R 13167527 13167612 17 148 9.5 0.0 4.8 2.9 194 chr2R 13167418 intron GLaz - chr2R 13167515 intron GLaz - chr2R 13167612 intron GLaz - chr2R_17_13165001 chr2R_13165001 RAL-307_125b 1185 chr2R 13220537 13220560 chr2R 13220666 13220689 11 129 1.5 14.0 7.8 1.2 152 chr2R 13220537 intron CG17059 + chr2R 13220613 intron CG17059 + chr2R 13220689 intron CG17059 + chr2R_11_13220001 chr2R_13220001 RAL-307_125b 1186 chr2R 13305455 13305510 chr2R 13305581 13305642 19 130 17.5 8.0 12.8 1.4 187 chr2R 13305455 intergenic not near genes chr2R 13305548 intergenic not near genes chr2R 13305642 intergenic not near genes chr2R_19_13305001 chr2R_13305001 RAL-307_125b 1187 chr2R 13309613 13309683 chr2R 13309781 13309851 9 166 3.5 6.0 4.8 1.6 238 chr2R 13309613 intergenic not near genes chr2R 13309732 intergenic not near genes chr2R 13309851 intergenic not near genes chr2R_9_13305001 chr2R_13305001 RAL-307_125b 1188 chr2R 13310897 13310911 chr2R 13311024 13311038 8 127 1.5 2.5 2.0 2.7 141 chr2R 13310897 intergenic not near genes chr2R 13310968 intergenic not near genes chr2R 13311038 intergenic not near genes chr2R_8_13310001 chr2R_13310001 RAL-307_125b 1189 chr2R 13364679 13364732 chr2R 13364815 13364868 35 134 5.5 11.5 8.5 3.7 189 chr2R 13364679 intergenic not near genes chr2R 13364774 intergenic not near genes chr2R 13364868 intergenic not near genes chr2R_35_13360001 chr2R_13360001 RAL-307_125b 1190 chr2R 13376606 13376635 chr2R 13376766 13376795 6 160 5.5 5.0 5.2 1.0 189 chr2R 13376606 intron CG10814 - chr2R 13376700 intron CG10814 - chr2R 13376795 exon CG10814 - chr2R_6_13375001 chr2R_13375001 RAL-307_125b 1191 chr2R 13403872 13404031 chr2R 13404007 13404142 44 133 0.5 0.5 0.5 29.3 270 chr2R 13403872 intergenic not near genes chr2R 13404007 intergenic not near genes chr2R 13404142 intergenic not near genes chr2R_44_13400001 chr2R_13400001 RAL-307_125b 1192 chr2R 13431442 13431519 chr2R 13431571 13431648 38 128 7.0 8.5 7.8 4.3 206 chr2R 13431442 intron CG42321 - chr2R 13431545 intron CG42321 - chr2R 13431648 intron CG42321 - chr2R_38_13430001 chr2R_13430001 RAL-307_125b 1193 chr2R 13438867 13438941 chr2R 13440137 13440214 30 1273 51.5 84.0 67.8 0.4 1347 chr2R 13438867 5` UTR CG42321 - chr2R 13439540 3` UTR cnn - chr2R 13440214 exon cnn - chr2R_30_13435001 chr2R_13435001 RAL-307_125b 1194 chr2R 13464428 13464477 chr2R 13464609 13464658 29 179 17.5 10.5 14.0 1.9 230 chr2R 13464428 intron arr - chr2R 13464543 intron arr - chr2R 13464658 intron arr - chr2R_29_13460001 chr2R_13460001 RAL-307_125b 1195 chr2R 13464478 13464493 chr2R 13464604 13464674 13 172 12.5 8.5 10.5 1.1 196 chr2R 13464478 intron arr - chr2R 13464576 intron arr - chr2R 13464674 intron arr - chr2R_13_13460001 chr2R_13460001 RAL-307_125b 1196 chr2R 13532469 13532525 chr2R 13532635 13532691 25 162 10.0 5.5 7.8 2.8 222 chr2R 13532469 intron Vmat - chr2R 13532580 intron Vmat - chr2R 13532691 intron Vmat - chr2R_25_13530001 chr2R_13530001 RAL-307_125b 1197 chr2R 13540341 13540420 chr2R 13540641 13540692 15 296 0.5 8.0 4.2 2.9 351 chr2R 13540341 intron CG6145 - chr2R 13540516 intron CG6145 - chr2R 13540692 intron CG6145 - chr2R_15_13540001 chr2R_13540001 RAL-307_125b 1198 chr2R 13554690 13554713 chr2R 13554827 13554848 8 136 0.5 8.5 4.5 1.5 158 chr2R 13554690 intron Roe1 + chr2R 13554769 intron Roe1 + chr2R 13554848 intron Roe1 + chr2R_8_13550001 chr2R_13550001 RAL-307_125b 1199 chr2R 13568160 13568184 chr2R 13568291 13568307 13 130 8.5 10.0 9.2 1.3 147 chr2R 13568160 intergenic not near genes chr2R 13568234 intergenic not near genes chr2R 13568307 intergenic not near genes chr2R_13_13565001 chr2R_13565001 RAL-307_125b 1200 chr2R 13577386 13577458 chr2R 13577513 13577580 31 123 6.5 5.5 6.0 4.4 194 chr2R 13577386 5` UTR CR44365 + chr2R 13577483 5` UTR CR44365 + chr2R 13577580 intergenic CR44365 +,CR44366 + chr2R_31_13575001 chr2R_13575001 RAL-307_125b 1201 chr2R 13580501 13580522 chr2R 13580856 13580921 jockey 11 392 0.0 2.5 1.2 5.0 420 chr2R 13580501 3` UTR CG6191 - chr2R 13580711 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580921 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_11_13580001 chr2R_13580001 RAL-307_125b 1202 chr2R 13652659 13652738 chr2R 13652788 13652866 31 125 8.5 4.0 6.2 4.3 207 chr2R 13652659 intron fas + chr2R 13652762 intron fas + chr2R 13652866 intron fas + chr2R_31_13650001 chr2R_13650001 RAL-307_125b 1203 chr2R 13658040 13658060 chr2R 13658169 13658190 5 127 18.0 6.5 12.2 0.4 150 chr2R 13658040 intron fas + chr2R 13658115 intron fas + chr2R 13658190 intron fas + chr2R_5_13655001 chr2R_13655001 RAL-307_125b 1204 chr2R 13658063 13658096 chr2R 13658167 13658215 7 120 9.5 7.5 8.5 0.7 152 chr2R 13658063 intron fas + chr2R 13658139 intron fas + chr2R 13658215 intron fas + chr2R_7_13655001 chr2R_13655001 RAL-307_125b 1205 chr2R 13658102 13658105 chr2R 13658166 13658228 4 92 9.5 7.5 8.5 0.4 126 chr2R 13658102 intron fas + chr2R 13658165 intron fas + chr2R 13658228 intron fas + chr2R_4_13655001 chr2R_13655001 RAL-307_125b 1206 chr2R 13709799 13709854 chr2R 13709942 13709997 21 143 5.0 15.0 10.0 1.9 198 chr2R 13709799 intron fas + chr2R 13709898 intron fas + chr2R 13709997 intron fas + chr2R_21_13705001 chr2R_13705001 RAL-307_125b 1207 chr2R 13718599 13718611 chr2R 13718746 13718758 5 147 8.0 8.0 8.0 0.6 159 chr2R 13718599 intron fas + chr2R 13718678 intron fas + chr2R 13718758 intron fas + chr2R_5_13715001 chr2R_13715001 RAL-307_125b 1208 chr2R 13721179 13721227 chr2R 13721293 13721324 13 111 9.0 9.0 9.0 1.3 145 chr2R 13721179 intron fas + chr2R 13721252 intron fas + chr2R 13721324 intron fas + chr2R_13_13720001 chr2R_13720001 RAL-307_125b 1209 chr2R 13726259 13726268 chr2R 13726441 13726450 5 182 5.0 7.5 6.2 0.7 191 chr2R 13726259 exon fas + chr2R 13726354 intron fas + chr2R 13726450 intron fas + chr2R_5_13725001 chr2R_13725001 RAL-307_125b 1210 chr2R 13728086 13728155 chr2R 13735793 13735862 opus 26 7707 13.0 8.5 10.8 2.2 7776 chr2R 13728086 intron fas + chr2R 13731974 intron fas + chr2R 13735862 intron fas + chr2R_26_13730001 chr2R_13730001 RAL-307_125b 1211 chr2R 13764465 13764480 chr2R 13764640 13764660 8 179 5.5 0.0 2.8 2.1 195 chr2R 13764465 intergenic not near genes chr2R 13764562 intergenic not near genes chr2R 13764660 intergenic not near genes chr2R_8_13760001 chr2R_13760001 RAL-307_125b 1212 chr2R 13768938 13768952 chr2R 13769087 13769101 7 149 16.0 11.5 13.8 0.5 163 chr2R 13768938 intergenic not near genes chr2R 13769020 intergenic not near genes chr2R 13769101 intergenic not near genes chr2R_7_13765001 chr2R_13765001 RAL-307_125b 1213 chr2R 13768953 13768963 chr2R 13769082 13769112 4 143 13.0 9.5 11.2 0.3 159 chr2R 13768953 intergenic not near genes chr2R 13769032 intergenic not near genes chr2R 13769112 intergenic not near genes chr2R_4_13765001 chr2R_13765001 RAL-307_125b 1214 chr2R 13768974 13769002 chr2R 13769078 13769112 11 135 6.5 9.0 7.8 1.2 138 chr2R 13768974 intergenic not near genes chr2R 13769043 intergenic not near genes chr2R 13769112 intergenic not near genes chr2R_11_13765001 chr2R_13765001 RAL-307_125b 1215 chr2R 13817649 13817690 chr2R 13817781 13817822 13 130 7.0 4.5 5.8 1.9 173 chr2R 13817649 intron stj + chr2R 13817736 intron stj + chr2R 13817822 intron stj + chr2R_13_13815001 chr2R_13815001 RAL-307_125b 1216 chr2R 13868852 13868924 chr2R 13868981 13869031 21 128 10.0 12.0 11.0 1.8 179 chr2R 13868852 intron shot - chr2R 13868942 intron shot - chr2R 13869031 intron shot - chr2R_21_13865001 chr2R_13865001 RAL-307_125b 1217 chr2R 13905576 13905614 chr2R 13907608 13907614 Rt1a 4 2024 0.5 9.5 5.0 0.7 2038 chr2R 13905576 intron shot - chr2R 13906595 intron shot - chr2R 13907614 intron shot - chr2R_4_13905001 chr2R_13905001 RAL-307_125b 1218 chr2R 13925802 13925821 chr2R 13926028 13926047 14 226 16.0 12.0 14.0 0.9 245 chr2R 13925802 intron shot - chr2R 13925924 intron shot - chr2R 13926047 intron shot - chr2R_14_13925001 chr2R_13925001 RAL-307_125b 1219 chr2R 13925827 13925861 chr2R 13926026 13926077 16 223 8.5 11.0 9.8 1.5 250 chr2R 13925827 intron shot - chr2R 13925952 intron shot - chr2R 13926077 intron shot - chr2R_16_13925001 chr2R_13925001 RAL-307_125b 1220 chr2R 13940651 13940671 chr2R 13940822 13940842 15 171 24.5 10.5 17.5 0.8 191 chr2R 13940651 intron shot - chr2R 13940746 intron shot - chr2R 13940842 intron shot - chr2R_15_13940001 chr2R_13940001 RAL-307_125b 1221 chr2R 13940675 13940718 chr2R 13940819 13940863 19 168 13.0 8.5 10.8 1.6 188 chr2R 13940675 intron shot - chr2R 13940769 intron shot - chr2R 13940863 intron shot - chr2R_19_13940001 chr2R_13940001 RAL-307_125b 1222 chr2R 13995227 13995233 chr2R 13995364 13995370 4 137 1.5 39.0 20.2 0.2 143 chr2R 13995227 intron mam + chr2R 13995298 intron mam + chr2R 13995370 intron mam + chr2R_4_13995001 chr2R_13995001 RAL-307_125b 1223 chr2R 14050823 14050847 chr2R 14050942 14050965 8 127 11.0 11.5 11.2 0.7 142 chr2R 14050823 intron mam + chr2R 14050894 intron mam + chr2R 14050965 intron mam + chr2R_8_14050001 chr2R_14050001 RAL-307_125b 1224 chr2R 14054026 14054071 chr2R 14054154 14054161 9 116 11.0 12.5 11.8 0.7 135 chr2R 14054026 intron mam + chr2R 14054094 intron mam + chr2R 14054161 intron mam + chr2R_9_14050001 chr2R_14050001 RAL-307_125b 1225 chr2R 14093383 14093393 chr2R 14109585 14109595 5 16202 13.5 1.5 7.5 0.6 16212 chr2R 14093383 intron Prosap - chr2R 14101489 intron Prosap - chr2R 14109595 intron Prosap - chr2R_5_14100001 chr2R_14100001 RAL-307_125b 1226 chr2R 14118936 14118951 chr2R 14119066 14119081 6 130 19.5 10.5 15.0 0.4 145 chr2R 14118936 intron Prosap - chr2R 14119008 intron Prosap - chr2R 14119081 intron Prosap - chr2R_6_14115001 chr2R_14115001 RAL-307_125b 1227 chr2R 14118960 14118970 chr2R 14119064 14119100 5 119 14.5 10.0 12.2 0.4 140 chr2R 14118960 intron Prosap - chr2R 14119030 intron Prosap - chr2R 14119100 intron Prosap - chr2R_5_14115001 chr2R_14115001 RAL-307_125b 1228 chr2R 14168336 14168393 chr2R 14168460 14168525 28 137 8.0 12.0 10.0 2.5 189 chr2R 14168336 intergenic CG18327 +,CG18324 + chr2R 14168430 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168525 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_28_14165001 chr2R_14165001 RAL-307_125b 1229 chr2R 14266712 14266787 chr2R 14266838 14266878 23 120 9.0 11.5 10.2 2.1 166 chr2R 14266712 intron CG8547 - chr2R 14266795 intron CG8547 - chr2R 14266878 intron CG8547 - chr2R_23_14265001 chr2R_14265001 RAL-307_125b 1230 chr2R 14277537 14277603 chr2R 14277669 14277735 32 130 12.5 17.0 14.8 2.0 198 chr2R 14277537 5` UTR Ih + chr2R 14277636 5` UTR Ih + chr2R 14277735 5` UTR Ih + chr2R_32_14275001 chr2R_14275001 RAL-307_125b 1231 chr2R 14285026 14285047 chr2R 14285159 14285180 11 132 0.5 9.0 4.8 1.9 154 chr2R 14285026 intron Ih + chr2R 14285103 intron Ih + chr2R 14285180 intron Ih + chr2R_11_14285001 chr2R_14285001 RAL-307_125b 1232 chr2R 14306059 14306130 chr2R 14306185 14306256 32 126 13.5 12.0 12.8 2.3 197 chr2R 14306059 intergenic not near genes chr2R 14306158 intergenic not near genes chr2R 14306256 intergenic not near genes chr2R_32_14305001 chr2R_14305001 RAL-307_125b 1233 chr2R 14322718 14322721 chr2R 14322858 14322861 5 140 8.5 12.0 10.2 0.4 143 chr2R 14322718 intron Shroom + chr2R 14322790 intron Shroom + chr2R 14322861 intron Shroom + chr2R_5_14320001 chr2R_14320001 RAL-307_125b 1234 chr2R 14322724 14322768 chr2R 14322852 14322908 11 138 2.0 11.0 6.5 1.5 184 chr2R 14322724 intron Shroom + chr2R 14322816 intron Shroom + chr2R 14322908 intron Shroom + chr2R_11_14320001 chr2R_14320001 RAL-307_125b 1235 chr2R 14357509 14357575 chr2R 14357649 14357710 24 137 6.5 7.5 7.0 3.0 201 chr2R 14357509 intergenic CG8617 -,Arc1 - chr2R 14357610 intergenic Arc1 -,CG8617 - chr2R 14357710 intergenic Arc1 -,CG8617 - chr2R_24_14355001 chr2R_14355001 RAL-307_125b 1236 chr2R 14394195 14394236 chr2R 14399034 14399035 Doc 5 4831 16.0 12.5 14.2 0.3 4840 chr2R 14394195 intergenic not near genes chr2R 14396615 intergenic not near genes chr2R 14399035 intergenic not near genes chr2R_5_14395001 chr2R_14395001 RAL-307_125b 1237 chr2R 14467269 14467302 chr2R 14476477 14476478 roo 7 9203 9.5 10.0 9.8 0.6 9209 chr2R 14467269 intergenic not near genes chr2R 14471874 intergenic not near genes chr2R 14476478 5` UTR CR44462 + chr2R_7_14470001 chr2R_14470001 RAL-307_125b 1238 chr2R 14467305 14467325 chr2R 14476467 14476480 roo 13 9191 6.5 8.5 7.5 1.5 9175 chr2R 14467305 intergenic not near genes chr2R 14471892 intergenic not near genes chr2R 14476480 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 RAL-307_125b 1239 chr2R 14497337 14497386 chr2R 14498550 14498593 1360 19 1212 4.0 7.5 5.8 2.8 1256 chr2R 14497337 intergenic Cpsf160 -,L + chr2R 14497965 intron Cpsf160 - chr2R 14498593 3` UTR Cpsf160 - chr2R_19_14495001 chr2R_14495001 RAL-307_125b 1240 chr2R 14514441 14514500 chr2R 14514584 14514643 23 140 9.5 11.5 10.5 2.0 202 chr2R 14514441 intron,exon Cpr51A -,CG30197 + chr2R 14514542 intron,intron Cpr51A -,CG30197 + chr2R 14514643 intron,intron Cpr51A -,CG30197 + chr2R_23_14510001 chr2R_14510001 RAL-307_125b 1241 chr2R 14530324 14530375 chr2R 14530463 14530514 16 139 9.0 12.0 10.5 1.4 190 chr2R 14530324 intron ttv + chr2R 14530419 intron ttv + chr2R 14530514 intron ttv + chr2R_16_14530001 chr2R_14530001 RAL-307_125b 1242 chr2R 14533728 14533786 chr2R 14533860 14533902 18 127 6.5 6.5 6.5 2.4 174 chr2R 14533728 intron ttv + chr2R 14533815 intron ttv + chr2R 14533902 intron ttv + chr2R_18_14530001 chr2R_14530001 RAL-307_125b 1243 chr2R 14565513 14565581 chr2R 14565640 14565704 34 126 16.5 13.0 14.8 2.2 191 chr2R 14565513 intron ttv + chr2R 14565608 intron ttv + chr2R 14565704 intron ttv + chr2R_34_14565001 chr2R_14565001 RAL-307_125b 1244 chr2R 14653839 14653847 chr2R 14653974 14653979 7 134 21.5 7.5 14.5 0.5 140 chr2R 14653839 intergenic not near genes chr2R 14653909 intergenic not near genes chr2R 14653979 intergenic not near genes chr2R_7_14650001 chr2R_14650001 RAL-307_125b 1245 chr2R 14653848 14653917 chr2R 14653971 14654030 28 125 8.0 6.5 7.2 3.4 182 chr2R 14653848 intergenic not near genes chr2R 14653939 intergenic not near genes chr2R 14654030 intergenic not near genes chr2R_28_14650001 chr2R_14650001 RAL-307_125b 1246 chr2R 14722269 14722290 chr2R 14722423 14722444 9 154 1.5 11.0 6.2 1.2 175 chr2R 14722269 intergenic not near genes chr2R 14722356 intergenic not near genes chr2R 14722444 intergenic not near genes chr2R_9_14720001 chr2R_14720001 RAL-307_125b 1247 chr2R 14722829 14722858 chr2R 14722984 14723013 12 154 19.5 0.5 10.0 1.1 184 chr2R 14722829 intergenic not near genes chr2R 14722921 intergenic not near genes chr2R 14723013 intergenic not near genes chr2R_12_14720001 chr2R_14720001 RAL-307_125b 1248 chr2R 14722868 14722898 chr2R 14722978 14723062 7 149 10.5 0.5 5.5 1.1 194 chr2R 14722868 intergenic not near genes chr2R 14722965 intergenic not near genes chr2R 14723062 intergenic not near genes chr2R_7_14720001 chr2R_14720001 RAL-307_125b 1249 chr2R 14733386 14733420 chr2R 14733484 14733543 7 119 4.5 2.5 3.5 1.6 157 chr2R 14733386 intergenic not near genes chr2R 14733464 intergenic not near genes chr2R 14733543 intergenic not near genes chr2R_7_14730001 chr2R_14730001 RAL-307_125b 1250 chr2R 14737071 14737144 chr2R 14737199 14737233 20 120 11.0 10.5 10.8 1.7 162 chr2R 14737071 intergenic not near genes chr2R 14737152 intergenic CR43428 - chr2R 14737233 intergenic CR43428 - chr2R_20_14735001 chr2R_14735001 RAL-307_125b 1251 chr2R 14748129 14748148 chr2R 14748490 14748506 10 361 1.5 7.5 4.5 1.8 377 chr2R 14748129 3` UTR AttA + chr2R 14748318 intergenic AttA + chr2R 14748506 intergenic AttA + chr2R_10_14745001 chr2R_14745001 RAL-307_125b 1252 chr2R 14748821 14748895 chr2R 14748970 14749044 24 148 7.5 9.0 8.2 2.6 223 chr2R 14748821 intergenic AttB + chr2R 14748932 intergenic AttB + chr2R 14749044 intergenic AttB + chr2R_24_14745001 chr2R_14745001 RAL-307_125b 1253 chr2R 14797338 14797624 chr2R 14797473 14797762 16 146 2.0 21.0 11.5 1.3 424 chr2R 14797338 intron kn - chr2R 14797550 intron kn - chr2R 14797762 intron kn - chr2R_16_14795001 chr2R_14795001 RAL-307_125b 1254 chr2R 14826348 14826387 chr2R 14826502 14826541 14 154 5.5 6.0 5.8 2.1 193 chr2R 14826348 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826541 intergenic not near genes chr2R_14_14825001 chr2R_14825001 RAL-307_125b 1255 chr2R 14842340 14842392 chr2R 14842486 14842538 21 146 12.5 5.0 8.8 2.1 198 chr2R 14842340 intergenic NaPi-T - chr2R 14842439 intergenic NaPi-T - chr2R 14842538 intergenic NaPi-T - chr2R_21_14840001 chr2R_14840001 RAL-307_125b 1256 chr2R 14850006 14850024 chr2R 14850162 14850180 9 155 58.0 56.0 57.0 0.2 174 chr2R 14850006 exon SMC2 - chr2R 14850093 exon SMC2 - chr2R 14850180 exon SMC2 - chr2R_9_14850001 chr2R_14850001 RAL-307_125b 1257 chr2R 14850032 14850081 chr2R 14850161 14850237 29 150 48.0 56.0 52.0 0.5 205 chr2R 14850032 exon SMC2 - chr2R 14850134 intron SMC2 - chr2R 14850237 exon SMC2 - chr2R_29_14850001 chr2R_14850001 RAL-307_125b 1258 chr2R 14889169 14889241 chr2R 14897827 14897891 Max-element 27 8653 11.5 0.5 6.0 3.9 8722 chr2R 14889169 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897891 intergenic not near genes chr2R_27_14890001 chr2R_14890001 RAL-307_125b 1259 chr2R 14906441 14906509 chr2R 14906601 14906669 32 159 11.5 16.0 13.8 2.2 228 chr2R 14906441 intron CG10249 - chr2R 14906555 intron CG10249 - chr2R 14906669 intron CG10249 - chr2R_32_14905001 chr2R_14905001 RAL-307_125b 1260 chr2R 14911672 14911725 chr2R 14911832 14911898 40 171 10.0 11.5 10.8 3.4 226 chr2R 14911672 intron CG10249 - chr2R 14911785 intron CG10249 - chr2R 14911898 intron CG10249 - chr2R_40_14910001 chr2R_14910001 RAL-307_125b 1261 chr2R 14917801 14917878 chr2R 14917936 14918013 37 133 6.0 9.0 7.5 4.4 212 chr2R 14917801 intron CG10249 - chr2R 14917907 intron CG10249 - chr2R 14918013 intron CG10249 - chr2R_37_14915001 chr2R_14915001 RAL-307_125b 1262 chr2R 14919055 14919126 chr2R 14919186 14919257 8 136 11.5 0.5 6.0 1.1 202 chr2R 14919055 intron CG10249 - chr2R 14919156 intron CG10249 - chr2R 14919257 intron CG10249 - chr2R_8_14915001 chr2R_14915001 RAL-307_125b 1263 chr2R 14922096 14922117 chr2R 14922222 14922243 18 126 24.0 6.0 15.0 1.1 147 chr2R 14922096 intron CG10249 - chr2R 14922170 intron CG10249 - chr2R 14922243 intron CG10249 - chr2R_18_14920001 chr2R_14920001 RAL-307_125b 1264 chr2R 14922121 14922163 chr2R 14922217 14922287 25 123 12.5 8.0 10.2 2.2 166 chr2R 14922121 intron CG10249 - chr2R 14922204 intron CG10249 - chr2R 14922287 intron CG10249 - chr2R_25_14920001 chr2R_14920001 RAL-307_125b 1265 chr2R 14985434 14985471 chr2R 14985546 14985586 11 117 1.5 7.5 4.5 2.0 152 chr2R 14985434 intron pcs + chr2R 14985510 intron pcs + chr2R 14985586 intron pcs + chr2R_11_14985001 chr2R_14985001 RAL-307_125b 1266 chr2R 14998470 14998478 chr2R 14998660 14998668 7 190 18.0 7.5 12.8 0.5 198 chr2R 14998470 intergenic not near genes chr2R 14998569 intergenic not near genes chr2R 14998668 intergenic not near genes chr2R_7_14995001 chr2R_14995001 RAL-307_125b 1267 chr2R 14998479 14998512 chr2R 14998655 14998702 28 188 9.0 6.5 7.8 3.2 223 chr2R 14998479 intergenic not near genes chr2R 14998590 intergenic not near genes chr2R 14998702 intergenic not near genes chr2R_28_14995001 chr2R_14995001 RAL-307_125b 1268 chr2R 15004678 15004755 chr2R 15005058 15005069 jockey 35 377 8.5 7.0 7.8 4.0 391 chr2R 15004678 intergenic not near genes chr2R 15004874 intergenic not near genes chr2R 15005069 intergenic not near genes chr2R_35_15000001 chr2R_15000001 RAL-307_125b 1269 chr2R 15015423 15015483 chr2R 15022895 15022957 mdg1 24 7469 7.5 9.0 8.2 2.6 7534 chr2R 15015423 intron hbs + chr2R 15019190 intron hbs + chr2R 15022957 intron hbs + chr2R_24_15015001 chr2R_15015001 RAL-307_125b 1270 chr2R 15065590 15065646 chr2R 15065703 15065774 14 111 6.0 6.0 6.0 2.0 184 chr2R 15065590 intergenic not near genes chr2R 15065682 intergenic not near genes chr2R 15065774 intergenic not near genes chr2R_14_15065001 chr2R_15065001 RAL-307_125b 1271 chr2R 15119275 15119344 chr2R 15127802 15127868 Tirant 25 8520 9.0 5.5 7.2 3.0 8593 chr2R 15119275 intron chn + chr2R 15123572 intron chn + chr2R 15127868 intron chn + chr2R_25_15120001 chr2R_15120001 RAL-307_125b 1272 chr2R 15137920 15137988 chr2R 15138049 15138089 17 125 8.0 4.0 6.0 2.4 169 chr2R 15137920 intron chn + chr2R 15138004 intron chn + chr2R 15138089 intron chn + chr2R_17_15135001 chr2R_15135001 RAL-307_125b 1273 chr2R 15157034 15157105 chr2R 15157176 15157245 15 138 0.0 8.5 4.2 2.9 211 chr2R 15157034 intron igl + chr2R 15157140 intron igl + chr2R 15157245 intron igl + chr2R_15_15155001 chr2R_15155001 RAL-307_125b 1274 chr2R 15296114 15296172 chr2R 15296247 15296305 32 129 4.5 11.0 7.8 3.6 191 chr2R 15296114 intron Trpm - chr2R 15296210 intron Trpm - chr2R 15296305 intron Trpm - chr2R_32_15295001 chr2R_15295001 RAL-307_125b 1275 chr2R 15330164 15330232 chr2R 15330348 15330416 21 183 0.5 8.0 4.2 4.0 252 chr2R 15330164 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330416 3` UTR CR44371 - chr2R_21_15330001 chr2R_15330001 RAL-307_125b 1276 chr2R 15340641 15340660 chr2R 15349276 15349295 Tirant 13 8634 24.0 9.5 16.8 0.7 8654 chr2R 15340641 intron unc-5 + chr2R 15344968 intron unc-5 + chr2R 15349295 intron unc-5 + chr2R_13_15340001 chr2R_15340001 RAL-307_125b 1277 chr2R 15359338 15359409 chr2R 15359466 15359538 13 129 11.0 10.5 10.8 1.1 200 chr2R 15359338 intron unc-5 + chr2R 15359438 intron unc-5 + chr2R 15359538 intron unc-5 + chr2R_13_15355001 chr2R_15355001 RAL-307_125b 1278 chr2R 15390016 15390088 chr2R 15390143 15390215 25 126 6.5 7.0 6.8 3.2 199 chr2R 15390016 intergenic not near genes chr2R 15390116 intergenic not near genes chr2R 15390215 intergenic not near genes chr2R_25_15390001 chr2R_15390001 RAL-307_125b 1279 chr2R 15408433 15408444 chr2R 15408573 15408589 5 145 20.0 7.5 13.8 0.3 156 chr2R 15408433 intron CG43729 + chr2R 15408511 intron CG43729 + chr2R 15408589 intron CG43729 + chr2R_5_15405001 chr2R_15405001 RAL-307_125b 1280 chr2R 15408450 15408492 chr2R 15408564 15408628 14 137 9.5 4.5 7.0 1.8 178 chr2R 15408450 intron CG43729 + chr2R 15408539 intron CG43729 + chr2R 15408628 intron CG43729 + chr2R_14_15405001 chr2R_15405001 RAL-307_125b 1281 chr2R 15472023 15472058 chr2R 15472144 15472162 4 123 0.0 13.5 6.8 0.5 139 chr2R 15472023 intergenic CG43729 +,CG8180 - chr2R 15472092 intergenic CG8180 -,CG43729 + chr2R 15472162 intergenic CG8180 -,CG43729 + chr2R_4_15470001 chr2R_15470001 RAL-307_125b 1282 chr2R 15498158 15498194 chr2R 15498292 15498324 10 133 3.0 8.5 5.8 1.5 166 chr2R 15498158 intergenic not near genes chr2R 15498241 intergenic not near genes chr2R 15498324 intergenic not near genes chr2R_10_15495001 chr2R_15495001 RAL-307_125b 1283 chr2R 15593266 15593288 chr2R 15593401 15593423 7 135 26.0 19.5 22.8 0.3 157 chr2R 15593266 intergenic not near genes chr2R 15593344 intergenic not near genes chr2R 15593423 intergenic not near genes chr2R_7_15590001 chr2R_15590001 RAL-307_125b 1284 chr2R 15593291 15593299 chr2R 15593399 15593434 4 128 24.5 19.5 22.0 0.2 143 chr2R 15593291 intergenic not near genes chr2R 15593362 intergenic not near genes chr2R 15593434 intergenic not near genes chr2R_4_15590001 chr2R_15590001 RAL-307_125b 1285 chr2R 15638579 15638662 chr2R 15638720 15638801 25 134 0.5 4.5 2.5 7.1 222 chr2R 15638579 intron CG42524 + chr2R 15638690 intron CG42524 + chr2R 15638801 intron CG42524 + chr2R_25_15635001 chr2R_15635001 RAL-307_125b 1286 chr2R 15645770 15645834 chr2R 15645935 15646005 26 165 60.5 65.0 62.8 0.4 235 chr2R 15645770 intron CG42524 + chr2R 15645888 intron CG42524 + chr2R 15646005 intron CG42524 + chr2R_26_15645001 chr2R_15645001 RAL-307_125b 1287 chr2R 15656013 15656068 chr2R 15656154 15656174 9 137 4.5 13.0 8.8 0.9 161 chr2R 15656013 intron CG42524 + chr2R 15656094 intron CG42524 + chr2R 15656174 intron CG42524 + chr2R_9_15655001 chr2R_15655001 RAL-307_125b 1288 chr2R 15679056 15679129 chr2R 15679190 15679263 30 133 14.0 12.0 13.0 2.1 207 chr2R 15679056 intergenic CG8207 -,Vha14-1 - chr2R 15679160 intergenic CG8207 -,Vha14-1 - chr2R 15679263 intergenic Vha14-1 -,CG8207 - chr2R_30_15675001 chr2R_15675001 RAL-307_125b 1289 chr2R 15702919 15702961 chr2R 15703046 15703087 17 127 15.5 10.0 12.8 1.2 168 chr2R 15702919 intergenic not near genes chr2R 15703003 intergenic not near genes chr2R 15703087 intergenic not near genes chr2R_17_15700001 chr2R_15700001 RAL-307_125b 1290 chr2R 15749695 15749737 chr2R 15749790 15749864 9 122 9.5 13.5 11.5 0.7 169 chr2R 15749695 intron CG30089 + chr2R 15749780 intron CG30089 + chr2R 15749864 intron CG30089 + chr2R_9_15745001 chr2R_15745001 RAL-307_125b 1291 chr2R 15818753 15818820 chr2R 15818888 15818953 26 135 6.5 10.0 8.2 2.8 200 chr2R 15818753 intron tun + chr2R 15818853 intron tun + chr2R 15818953 intron tun + chr2R_26_15815001 chr2R_15815001 RAL-307_125b 1292 chr2R 15869233 15869308 chr2R 15869367 15869435 18 128 10.5 0.5 5.5 2.8 202 chr2R 15869233 intergenic Rif1 -,sli - chr2R 15869334 intergenic sli -,Rif1 - chr2R 15869435 intergenic sli -,Rif1 - chr2R_18_15865001 chr2R_15865001 RAL-307_125b 1293 chr2R 15891770 15891832 chr2R 15891896 15891958 22 124 10.5 10.5 10.5 1.9 188 chr2R 15891770 intron sli - chr2R 15891864 intron sli - chr2R 15891958 intron sli - chr2R_22_15890001 chr2R_15890001 RAL-307_125b 1294 chr2R 16061705 16061714 chr2R 16064388 16064397 Burdock 8 2683 2.0 12.0 7.0 1.0 2692 chr2R 16061705 intergenic not near genes chr2R 16063051 intergenic not near genes chr2R 16064397 intergenic not near genes chr2R_8_16060001 chr2R_16060001 RAL-307_125b 1295 chr2R 16225160 16225233 chr2R 16225311 16225389 27 154 9.0 11.0 10.0 2.5 229 chr2R 16225160 exon CG15706 - chr2R 16225274 5` UTR CG15706 - chr2R 16225389 intron CG15706 - chr2R_27_16225001 chr2R_16225001 RAL-307_125b 1296 chr2R 16245363 16245427 chr2R 16245507 16245570 30 141 7.0 7.0 7.0 3.8 207 chr2R 16245363 intron CngA - chr2R 16245466 intron CngA - chr2R 16245570 intron CngA - chr2R_30_16245001 chr2R_16245001 RAL-307_125b 1297 chr2R 16352796 16352873 chr2R 16352926 16353006 16 131 8.0 1.5 4.8 2.8 210 chr2R 16352796 intergenic not near genes chr2R 16352901 intergenic not near genes chr2R 16353006 intergenic not near genes chr2R_16_16350001 chr2R_16350001 RAL-307_125b 1298 chr2R 16380100 16380146 chr2R 16380226 16380294 11 134 7.5 8.0 7.8 1.2 194 chr2R 16380100 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380197 intergenic CR45317 -,CR45316 +,CG43187 + chr2R 16380294 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_11_16380001 chr2R_16380001 RAL-307_125b 1299 chr2R 16460443 16460737 chr2R 16460571 16460869 24 130 9.5 11.5 10.5 2.1 426 chr2R 16460443 intergenic not near genes chr2R 16460656 intergenic not near genes chr2R 16460869 intergenic not near genes chr2R_24_16460001 chr2R_16460001 RAL-307_125b 1300 chr2R 16460758 16460766 chr2R 16460869 16460898 4 127 4.0 17.0 10.5 0.3 140 chr2R 16460758 intergenic not near genes chr2R 16460828 intergenic not near genes chr2R 16460898 intergenic not near genes chr2R_4_16460001 chr2R_16460001 RAL-307_125b 1301 chr2R 16539590 16539661 chr2R 16544846 16544949 copia 9 5260 1.5 0.0 0.8 5.0 5359 chr2R 16539590 intergenic not near genes chr2R 16542270 intergenic not near genes chr2R 16544949 intergenic not near genes chr2R_9_16540001 chr2R_16540001 RAL-307_125b 1302 chr2R 16552016 16552078 chr2R 16552140 16552212 19 133 3.5 4.0 3.8 4.0 196 chr2R 16552016 intergenic Syn2 + chr2R 16552114 intergenic Syn2 + chr2R 16552212 intergenic Syn2 + chr2R_19_16550001 chr2R_16550001 RAL-307_125b 1303 chr2R 16586850 16586907 chr2R 16586968 16587008 24 124 9.0 11.5 10.2 2.1 158 chr2R 16586850 intergenic RpLP2 +,CG8311 - chr2R 16586929 intergenic CG8311 -,RpLP2 + chr2R 16587008 intergenic CG8311 -,RpLP2 + chr2R_24_16585001 chr2R_16585001 RAL-307_125b 1304 chr2R 16617059 16617088 chr2R 16617181 16617218 15 125 9.5 17.5 13.5 1.0 159 chr2R 16617059 intron CG5065 + chr2R 16617138 intron CG5065 + chr2R 16617218 intron CG5065 + chr2R_15_16615001 chr2R_16615001 RAL-307_125b 1305 chr2R 16619928 16619999 chr2R 16620059 16620128 15 130 0.0 0.0 0.0 15.0 200 chr2R 16619928 intron CG5065 + chr2R 16620028 intron CG5065 + chr2R 16620128 intron CG5065 + chr2R_15_16620001 chr2R_16620001 RAL-307_125b 1306 chr2R 16838607 16838712 chr2R 16838776 16838823 22 153 0.0 3.5 1.8 7.9 216 chr2R 16838607 5` UTR CR43650 + chr2R 16838715 5` UTR CR43650 + chr2R 16838823 5` UTR CR43650 + chr2R_22_16835001 chr2R_16835001 RAL-307_125b 1307 chr2R 16910187 16910206 chr2R 16910336 16910355 9 149 16.0 7.5 11.8 0.7 168 chr2R 16910187 intergenic not near genes chr2R 16910271 intergenic not near genes chr2R 16910355 intergenic not near genes chr2R_9_16910001 chr2R_16910001 RAL-307_125b 1308 chr2R 16910207 16910247 chr2R 16910331 16910396 9 146 4.5 5.5 5.0 1.5 189 chr2R 16910207 intergenic not near genes chr2R 16910302 intergenic not near genes chr2R 16910396 intergenic not near genes chr2R_9_16910001 chr2R_16910001 RAL-307_125b 1309 chr2R 16930608 16930626 chr2R 16930736 16930754 7 128 0.5 3.0 1.8 2.5 146 chr2R 16930608 intron Pkc53E + chr2R 16930681 intron Pkc53E + chr2R 16930754 intron Pkc53E + chr2R_7_16930001 chr2R_16930001 RAL-307_125b 1310 chr2R 16993051 16993109 chr2R 16993180 16993238 17 127 13.5 0.5 7.0 2.1 187 chr2R 16993051 intron Cbp53E + chr2R 16993144 intron Cbp53E + chr2R 16993238 intron Cbp53E + chr2R_17_16990001 chr2R_16990001 RAL-307_125b 1311 chr2R 17048578 17048652 chr2R 17048707 17048776 32 128 10.0 9.5 9.8 3.0 198 chr2R 17048578 3` UTR CG9642 + chr2R 17048677 3` UTR CG9642 + chr2R 17048776 3` UTR CG9642 + chr2R_32_17045001 chr2R_17045001 RAL-307_125b 1312 chr2R 17066440 17066505 chr2R 17066570 17066635 45 130 13.0 13.5 13.2 3.2 195 chr2R 17066440 3` UTR,3` UTR CG6967 +,CG30460 - chr2R 17066538 3` UTR,3` UTR CG6967 +,CG30460 - chr2R 17066635 3` UTR CG30460 - chr2R_45_17065001 chr2R_17065001 RAL-307_125b 1313 chr2R 17079008 17079085 chr2R 17079140 17079216 25 129 4.5 12.5 8.5 2.6 208 chr2R 17079008 intron CG30460 - chr2R 17079112 intron CG30460 - chr2R 17079216 intron CG30460 - chr2R_25_17075001 chr2R_17075001 RAL-307_125b 1314 chr2R 17098616 17098619 chr2R 17098755 17098758 4 139 25.0 17.0 21.0 0.2 142 chr2R 17098616 intergenic GstS1 - chr2R 17098687 intergenic GstS1 - chr2R 17098758 intergenic GstS1 - chr2R_4_17095001 chr2R_17095001 RAL-307_125b 1315 chr2R 17098625 17098656 chr2R 17098750 17098795 13 135 15.5 15.5 15.5 0.8 170 chr2R 17098625 intergenic GstS1 - chr2R 17098710 intergenic GstS1 - chr2R 17098795 intergenic GstS1 - chr2R_13_17095001 chr2R_17095001 RAL-307_125b 1316 chr2R 17139356 17139406 chr2R 17139546 17139596 12 190 8.5 9.5 9.0 1.2 240 chr2R 17139356 3` UTR CG11395 + chr2R 17139476 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139596 3` UTR CG43103 - chr2R_12_17135001 chr2R_17135001 RAL-307_125b 1317 chr2R 17147208 17147258 chr2R 17152289 17152339 jockey 27 5080 12.5 14.5 13.5 1.9 5131 chr2R 17147208 intergenic not near genes chr2R 17149774 intergenic not near genes chr2R 17152339 intergenic not near genes chr2R_27_17145001 chr2R_17145001 RAL-307_125b 1318 chr2R 17161304 17161327 chr2R 17161561 17161567 6 254 19.0 2.0 10.5 0.5 263 chr2R 17161304 intergenic CG30457 - chr2R 17161436 intergenic not near genes chr2R 17161567 intergenic not near genes chr2R_6_17160001 chr2R_17160001 RAL-307_125b 1319 chr2R 17176358 17176373 chr2R 17182592 17182613 diver 6 6236 0.5 10.0 5.2 1.0 6255 chr2R 17176358 intergenic not near genes chr2R 17179486 intergenic not near genes chr2R 17182613 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-307_125b 1320 chr2R 17227055 17227119 chr2R 17227180 17227224 17 117 3.5 9.5 6.5 2.3 169 chr2R 17227055 intron mbl + chr2R 17227140 intron mbl + chr2R 17227224 intron mbl + chr2R_17_17225001 chr2R_17225001 RAL-307_125b 1321 chr2R 17236471 17236530 chr2R 17241719 17241774 copia 18 5248 6.0 5.0 5.5 2.8 5303 chr2R 17236471 intron mbl + chr2R 17239122 intron mbl + chr2R 17241774 intron mbl + chr2R_18_17235001 chr2R_17235001 RAL-307_125b 1322 chr2R 17259082 17259162 chr2R 17259250 17259328 24 165 5.5 7.0 6.2 3.3 246 chr2R 17259082 intron mbl + chr2R 17259205 intron mbl + chr2R 17259328 intron mbl + chr2R_24_17255001 chr2R_17255001 RAL-307_125b 1323 chr2R 17263275 17263326 chr2R 17263399 17263456 18 128 5.5 12.5 9.0 1.8 181 chr2R 17263275 intron mbl + chr2R 17263366 intron mbl + chr2R 17263456 intron mbl + chr2R_18_17260001 chr2R_17260001 RAL-307_125b 1324 chr2R 17389234 17389278 chr2R 17389375 17389389 12 136 12.5 8.5 10.5 1.0 155 chr2R 17389234 intergenic CR44344 - chr2R 17389312 intergenic CR44344 - chr2R 17389389 intergenic CR44344 - chr2R_12_17385001 chr2R_17385001 RAL-307_125b 1325 chr2R 17389284 17389295 chr2R 17389369 17389427 4 118 8.0 7.0 7.5 0.5 143 chr2R 17389284 intergenic CR44344 - chr2R 17389356 intergenic CR44344 - chr2R 17389427 intergenic CR44344 - chr2R_4_17385001 chr2R_17385001 RAL-307_125b 1326 chr2R 17397780 17397834 chr2R 17397921 17397975 26 140 6.0 4.5 5.2 4.2 195 chr2R 17397780 intron Sip1 + chr2R 17397878 intron Sip1 + chr2R 17397975 intron Sip1 + chr2R_26_17395001 chr2R_17395001 RAL-307_125b 1327 chr2R 17458966 17459030 chr2R 17459096 17459165 33 135 8.0 13.0 10.5 2.9 199 chr2R 17458966 intron CG14478 + chr2R 17459066 intron CG14478 + chr2R 17459165 intron CG14478 + chr2R_33_17455001 chr2R_17455001 RAL-307_125b 1328 chr2R 17470288 17470353 chr2R 17470423 17470487 19 134 5.0 1.5 3.2 4.5 199 chr2R 17470288 intron qkr54B + chr2R 17470388 intron qkr54B + chr2R 17470487 intron qkr54B + chr2R_19_17470001 chr2R_17470001 RAL-307_125b 1329 chr2R 17485871 17485879 chr2R 17490691 17490699 F-element 5 4820 29.5 11.5 20.5 0.2 4828 chr2R 17485871 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488285 intron NT5E-2 + chr2R 17490699 intron NT5E-2 + chr2R_5_17485001 chr2R_17485001 RAL-307_125b 1330 chr2R 17485880 17485950 chr2R 17490690 17490768 F-element 21 4818 9.0 11.5 10.2 1.9 4888 chr2R 17485880 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488324 intron NT5E-2 + chr2R 17490768 intron NT5E-2 + chr2R_21_17485001 chr2R_17485001 RAL-307_125b 1331 chr2R 17500615 17500684 chr2R 17500739 17500810 19 126 5.0 5.5 5.2 3.1 195 chr2R 17500615 intergenic not near genes chr2R 17500712 intergenic not near genes chr2R 17500810 intergenic not near genes chr2R_19_17500001 chr2R_17500001 RAL-307_125b 1332 chr2R 17532226 17532241 chr2R 17532337 17532368 6 120 12.5 11.5 12.0 0.5 142 chr2R 17532226 intron Patronin - chr2R 17532297 intron Patronin - chr2R 17532368 intron Patronin - chr2R_6_17530001 chr2R_17530001 RAL-307_125b 1333 chr2R 17643958 17644020 chr2R 17644084 17644150 8 126 4.0 13.0 8.5 0.8 192 chr2R 17643958 intergenic not near genes chr2R 17644054 intergenic not near genes chr2R 17644150 intergenic not near genes chr2R_8_17640001 chr2R_17640001 RAL-307_125b 1334 chr2R 17709934 17710012 chr2R 17710075 17710118 24 138 4.0 5.0 4.5 4.4 184 chr2R 17709934 intron CG6424 - chr2R 17710026 intron CG6424 - chr2R 17710118 intron CG6424 - chr2R_24_17710001 chr2R_17710001 RAL-307_125b 1335 chr2R 17760627 17760676 chr2R 17760800 17760853 22 176 19.0 11.5 15.2 1.4 226 chr2R 17760627 intergenic HLH54F +,CG5009 + chr2R 17760740 intergenic CG5009 +,HLH54F + chr2R 17760853 intergenic CG5009 +,HLH54F + chr2R_22_17760001 chr2R_17760001 RAL-307_125b 1336 chr2R 17760677 17760692 chr2R 17760793 17760863 10 167 12.5 8.5 10.5 0.9 186 chr2R 17760677 intergenic HLH54F +,CG5009 + chr2R 17760770 intergenic CG5009 +,HLH54F + chr2R 17760863 intergenic CG5009 +,HLH54F + chr2R_10_17760001 chr2R_17760001 RAL-307_125b 1337 chr2R 17782316 17782387 chr2R 17783569 17783640 pogo 18 1253 9.5 8.0 8.8 1.8 1324 chr2R 17782316 intergenic CG33981 -,fab1 - chr2R 17782978 intergenic not near genes chr2R 17783640 intergenic mir-31a - chr2R_18_17780001 chr2R_17780001 RAL-307_125b 1338 chr2R 17783994 17784052 chr2R 17784269 17784343 pogo 16 284 8.0 5.0 6.5 2.1 349 chr2R 17783994 intergenic mir-31a - chr2R 17784168 intergenic mir-31a - chr2R 17784343 intergenic mir-31a - chr2R_16_17780001 chr2R_17780001 RAL-307_125b 1339 chr2R 17832069 17832133 chr2R 17832195 17832254 31 126 1.0 8.0 4.5 5.6 185 chr2R 17832069 intron grh + chr2R 17832162 intron grh + chr2R 17832254 intron grh + chr2R_31_17830001 chr2R_17830001 RAL-307_125b 1340 chr2R 17918122 17918180 chr2R 17918249 17918307 14 126 18.5 0.5 9.5 1.3 185 chr2R 17918122 intron Elk + chr2R 17918214 intron Elk + chr2R 17918307 intron Elk + chr2R_14_17915001 chr2R_17915001 RAL-307_125b 1341 chr2R 17960099 17960174 chr2R 17960234 17960309 22 133 4.0 8.5 6.2 3.1 210 chr2R 17960099 intergenic not near genes chr2R 17960204 intergenic not near genes chr2R 17960309 intergenic not near genes chr2R_22_17960001 chr2R_17960001 RAL-307_125b 1342 chr2R 17966118 17966173 chr2R 17966239 17966304 11 117 3.5 8.0 5.8 1.6 186 chr2R 17966118 intergenic not near genes chr2R 17966211 intergenic not near genes chr2R 17966304 intergenic not near genes chr2R_11_17965001 chr2R_17965001 RAL-307_125b 1343 chr2R 17970999 17971006 chr2R 17971205 17971212 4 206 9.0 6.5 7.8 0.5 213 chr2R 17970999 intergenic not near genes chr2R 17971106 intergenic not near genes chr2R 17971212 intergenic not near genes chr2R_4_17970001 chr2R_17970001 RAL-307_125b 1344 chr2R 17971009 17971043 chr2R 17971202 17971228 19 188 5.0 6.0 5.5 2.9 219 chr2R 17971009 intergenic not near genes chr2R 17971118 intergenic not near genes chr2R 17971228 intergenic not near genes chr2R_19_17970001 chr2R_17970001 RAL-307_125b 1345 chr2R 17982875 17982950 chr2R 17983010 17983085 38 132 7.0 7.5 7.2 4.6 210 chr2R 17982875 intron dpr13 - chr2R 17982980 intron dpr13 - chr2R 17983085 intron dpr13 - chr2R_38_17980001 chr2R_17980001 RAL-307_125b 1346 chr2R 17986312 17986351 chr2R 17986480 17986519 18 167 3.5 7.5 5.5 2.8 207 chr2R 17986312 intron dpr13 - chr2R 17986416 intron dpr13 - chr2R 17986519 intron dpr13 - chr2R_18_17985001 chr2R_17985001 RAL-307_125b 1347 chr2R 17991331 17991338 chr2R 17991448 17991470 4 124 15.5 7.5 11.5 0.3 139 chr2R 17991331 intron dpr13 - chr2R 17991400 intron dpr13 - chr2R 17991470 intron dpr13 - chr2R_4_17990001 chr2R_17990001 RAL-307_125b 1348 chr2R 17991340 17991390 chr2R 17991445 17991466 15 119 7.5 6.5 7.0 1.9 126 chr2R 17991340 intron dpr13 - chr2R 17991403 intron dpr13 - chr2R 17991466 intron dpr13 - chr2R_15_17990001 chr2R_17990001 RAL-307_125b 1349 chr2R 18004546 18004579 chr2R 18005120 18005154 6 573 15.0 5.0 10.0 0.5 608 chr2R 18004546 intron dpr13 - chr2R 18004850 intron dpr13 - chr2R 18005154 intron dpr13 - chr2R_6_18000001 chr2R_18000001 RAL-307_125b 1350 chr2R 18004580 18004617 chr2R 18005119 18005192 16 571 5.5 5.0 5.2 2.6 612 chr2R 18004580 intron dpr13 - chr2R 18004886 intron dpr13 - chr2R 18005192 intron dpr13 - chr2R_16_18000001 chr2R_18000001 RAL-307_125b 1351 chr2R 18045253 18045302 chr2R 18045391 18045420 25 136 17.0 12.0 14.5 1.6 167 chr2R 18045253 intergenic CG5770 - chr2R 18045336 intergenic CG5770 - chr2R 18045420 intergenic CG5770 - chr2R_25_18045001 chr2R_18045001 RAL-307_125b 1352 chr2R 18045628 18045691 chr2R 18046030 18046083 jockey 31 402 14.5 10.5 12.5 2.3 455 chr2R 18045628 intergenic not near genes chr2R 18045856 intergenic not near genes chr2R 18046083 intergenic CG5767 - chr2R_31_18045001 chr2R_18045001 RAL-307_125b 1353 chr2R 18074553 18074618 chr2R 18074679 18074744 21 124 13.5 16.5 15.0 1.3 191 chr2R 18074553 intron CG34386 + chr2R 18074648 intron CG34386 + chr2R 18074744 intron CG34386 + chr2R_21_18070001 chr2R_18070001 RAL-307_125b 1354 chr2R 18075934 18075993 chr2R 18076070 18076137 29 141 6.5 10.5 8.5 3.1 203 chr2R 18075934 intron CG34386 + chr2R 18076036 intron CG34386 + chr2R 18076137 intron CG34386 + chr2R_29_18075001 chr2R_18075001 RAL-307_125b 1355 chr2R 18111646 18111704 chr2R 18115564 18115622 F-element 29 3916 11.5 10.0 10.8 2.5 3976 chr2R 18111646 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115622 intergenic not near genes chr2R_29_18110001 chr2R_18110001 RAL-307_125b 1356 chr2R 18141432 18141491 chr2R 18145749 18145808 6 4317 36.5 50.0 43.2 0.1 4376 chr2R 18141432 intron pAbp + chr2R 18143620 exon pAbp + chr2R 18145808 3` UTR pAbp + chr2R_6_18140001 chr2R_18140001 RAL-307_125b 1357 chr2R 18195155 18195222 chr2R 18195293 18195351 5 129 1.5 8.5 5.0 0.8 196 chr2R 18195155 intergenic not near genes chr2R 18195253 intergenic not near genes chr2R 18195351 intergenic not near genes chr2R_5_18195001 chr2R_18195001 RAL-307_125b 1358 chr2R 18204098 18204128 chr2R 18204233 18204263 13 135 6.0 0.0 3.0 3.2 165 chr2R 18204098 intergenic not near genes chr2R 18204180 intergenic not near genes chr2R 18204263 intergenic not near genes chr2R_13_18200001 chr2R_18200001 RAL-307_125b 1359 chr2R 18289383 18289449 chr2R 18289535 18289601 20 151 10.5 6.0 8.2 2.2 218 chr2R 18289383 intron,intron sbb -,CG14502 + chr2R 18289492 intron,intron sbb -,CG14502 + chr2R 18289601 5` UTR,intron sbb -,CG14502 + chr2R_20_18285001 chr2R_18285001 RAL-307_125b 1360 chr2R 18308241 18308315 chr2R 18308397 18308471 29 154 8.5 9.0 8.8 3.0 230 chr2R 18308241 intron sbb - chr2R 18308356 intron sbb - chr2R 18308471 intron sbb - chr2R_29_18305001 chr2R_18305001 RAL-307_125b 1361 chr2R 18318334 18318338 chr2R 18318465 18318469 5 131 9.0 0.0 4.5 0.9 135 chr2R 18318334 intron sbb - chr2R 18318402 intron sbb - chr2R 18318469 intron sbb - chr2R_5_18315001 chr2R_18315001 RAL-307_125b 1362 chr2R 18358349 18358410 chr2R 18372611 18372672 roo 14 14256 12.5 0.0 6.2 1.9 14323 chr2R 18358349 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372672 intergenic not near genes chr2R_14_18365001 chr2R_18365001 RAL-307_125b 1363 chr2R 18390819 18390891 chr2R 18390956 18390997 19 134 10.0 5.5 7.8 2.2 178 chr2R 18390819 intergenic CG15068 - chr2R 18390908 intergenic CG15068 - chr2R 18390997 intergenic CG15068 - chr2R_19_18390001 chr2R_18390001 RAL-307_125b 1364 chr2R 18402711 18402785 chr2R 18402964 18403028 16 247 3.0 0.5 1.8 5.7 317 chr2R 18402711 intergenic not near genes chr2R 18402870 intergenic GstE4 + chr2R 18403028 intergenic GstE4 + chr2R_16_18400001 chr2R_18400001 RAL-307_125b 1365 chr2R 18403294 18403357 chr2R 18404478 18404498 32 1182 4.5 8.0 6.2 4.4 1204 chr2R 18403294 exon GstE4 + chr2R 18403896 exon GstE4 + chr2R 18404498 intergenic GstE5 +,GstE4 + chr2R_32_18400001 chr2R_18400001 RAL-307_125b 1366 chr2R 18405707 18405780 chr2R 18405838 18405911 30 131 11.0 7.5 9.2 2.9 204 chr2R 18405707 intergenic GstE6 +,GstE5 + chr2R 18405809 intergenic GstE6 +,GstE5 + chr2R 18405911 intergenic GstE6 + chr2R_30_18405001 chr2R_18405001 RAL-307_125b 1367 chr2R 18408241 18408256 chr2R 18408412 18408427 8 169 15.0 11.0 13.0 0.6 186 chr2R 18408241 exon GstE8 + chr2R 18408334 exon GstE8 + chr2R 18408427 exon GstE8 + chr2R_8_18405001 chr2R_18405001 RAL-307_125b 1368 chr2R 18408269 18408281 chr2R 18408405 18408452 7 159 11.5 9.5 10.5 0.6 183 chr2R 18408269 exon GstE8 + chr2R 18408360 exon GstE8 + chr2R 18408452 exon GstE8 + chr2R_7_18405001 chr2R_18405001 RAL-307_125b 1369 chr2R 18408282 18408311 chr2R 18408401 18408482 12 159 6.5 9.0 7.8 1.4 200 chr2R 18408282 exon GstE8 + chr2R 18408382 exon GstE8 + chr2R 18408482 exon GstE8 + chr2R_12_18405001 chr2R_18405001 RAL-307_125b 1370 chr2R 18435689 18435768 chr2R 18435822 18435903 30 133 4.0 6.5 5.2 4.8 214 chr2R 18435689 intron CG30118 - chr2R 18435796 intron CG30118 - chr2R 18435903 intron CG30118 - chr2R_30_18435001 chr2R_18435001 RAL-307_125b 1371 chr2R 18439557 18439627 chr2R 18439717 18439787 14 154 6.0 6.5 6.2 1.9 230 chr2R 18439557 intron CG30118 - chr2R 18439672 intron CG30118 - chr2R 18439787 exon CG30118 - chr2R_14_18435001 chr2R_18435001 RAL-307_125b 1372 chr2R 18483014 18483043 chr2R 18483265 18483292 20 277 9.0 5.5 7.2 2.4 278 chr2R 18483014 intron CG30116 - chr2R 18483153 intron CG30116 - chr2R 18483292 intron CG30116 - chr2R_20_18480001 chr2R_18480001 RAL-307_125b 1373 chr2R 18487791 18487809 chr2R 18495292 18495310 blood 13 7500 13.5 9.0 11.2 1.1 7519 chr2R 18487791 intron CG30116 - chr2R 18491550 intron CG30116 - chr2R 18495310 intron CG30116 - chr2R_13_18490001 chr2R_18490001 RAL-307_125b 1374 chr2R 18487815 18487827 chr2R 18495289 18495328 blood 5 7492 9.5 9.0 9.2 0.5 7513 chr2R 18487815 intron CG30116 - chr2R 18491572 intron CG30116 - chr2R 18495328 intron CG30116 - chr2R_5_18490001 chr2R_18490001 RAL-307_125b 1375 chr2R 18513280 18513341 chr2R 18513407 18513473 31 129 0.0 12.5 6.2 4.3 193 chr2R 18513280 intergenic not near genes chr2R 18513376 intergenic not near genes chr2R 18513473 intergenic not near genes chr2R_31_18510001 chr2R_18510001 RAL-307_125b 1376 chr2R 18526552 18526617 chr2R 18526678 18526749 30 122 6.0 6.0 6.0 4.3 197 chr2R 18526552 intergenic CG43066 + chr2R 18526650 intergenic CG43066 + chr2R 18526749 intergenic CG43066 + chr2R_30_18525001 chr2R_18525001 RAL-307_125b 1377 chr2R 18575747 18575830 chr2R 18581985 18582042 3S18 31 6225 3.0 6.0 4.5 5.6 6295 chr2R 18575747 intron GEFmeso - chr2R 18578894 intron GEFmeso - chr2R 18582042 intron GEFmeso - chr2R_31_18575001 chr2R_18575001 RAL-307_125b 1378 chr2R 18585761 18585814 chr2R 18585886 18585942 19 125 9.0 9.5 9.2 1.9 181 chr2R 18585761 intron GEFmeso - chr2R 18585852 intron GEFmeso - chr2R 18585942 intron GEFmeso - chr2R_19_18585001 chr2R_18585001 RAL-307_125b 1379 chr2R 18590827 18590894 chr2R 18600024 18600075 roo 25 9194 7.5 5.5 6.5 3.3 9248 chr2R 18590827 intron GEFmeso - chr2R 18595451 intron GEFmeso - chr2R 18600075 intron GEFmeso - chr2R_25_18595001 chr2R_18595001 RAL-307_125b 1380 chr2R 18601134 18601194 chr2R 18601451 18601471 11 312 12.5 0.5 6.5 1.5 337 chr2R 18601134 intron GEFmeso - chr2R 18601302 intron GEFmeso - chr2R 18601471 intron GEFmeso - chr2R_11_18600001 chr2R_18600001 RAL-307_125b 1381 chr2R 18605089 18605162 chr2R 18605231 18605238 34 137 6.0 13.0 9.5 3.2 149 chr2R 18605089 intron GEFmeso - chr2R 18605164 intron GEFmeso - chr2R 18605238 intron GEFmeso - chr2R_34_18605001 chr2R_18605001 RAL-307_125b 1382 chr2R 18646361 18646435 chr2R 18646556 18646630 39 194 14.0 13.0 13.5 2.7 269 chr2R 18646361 intron SP2637 - chr2R 18646496 intron SP2637 - chr2R 18646630 intron SP2637 - chr2R_39_18645001 chr2R_18645001 RAL-307_125b 1383 chr2R 18652348 18652365 chr2R 18652479 18652496 11 131 0.0 17.0 8.5 1.2 148 chr2R 18652348 intron SP2637 - chr2R 18652422 intron SP2637 - chr2R 18652496 intron SP2637 - chr2R_11_18650001 chr2R_18650001 RAL-307_125b 1384 chr2R 18666032 18666075 chr2R 18666170 18666213 15 138 5.5 4.5 5.0 2.5 181 chr2R 18666032 intergenic CG33136 - chr2R 18666122 intergenic CG33136 - chr2R 18666213 intergenic CG33136 - chr2R_15_18665001 chr2R_18665001 RAL-307_125b 1385 chr2R 18692851 18692921 chr2R 18692988 18693057 18 136 4.5 4.5 4.5 3.3 206 chr2R 18692851 exon Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693057 intron Sik3 + chr2R_18_18690001 chr2R_18690001 RAL-307_125b 1386 chr2R 18713204 18713264 chr2R 18713331 18713391 32 126 10.5 10.0 10.2 2.9 187 chr2R 18713204 intergenic not near genes chr2R 18713298 intergenic not near genes chr2R 18713391 intergenic not near genes chr2R_32_18710001 chr2R_18710001 RAL-307_125b 1387 chr2R 18726865 18727050 chr2R 18726975 18727273 20 158 10.0 4.5 7.2 2.4 408 chr2R 18726865 intron Hs3st-A + chr2R 18727069 intron Hs3st-A + chr2R 18727273 intron Hs3st-A + chr2R_20_18725001 chr2R_18725001 RAL-307_125b 1388 chr2R 18727054 18727071 chr2R 18727277 18727284 6 221 9.5 15.0 12.2 0.5 230 chr2R 18727054 intron Hs3st-A + chr2R 18727169 intron Hs3st-A + chr2R 18727284 intron Hs3st-A + chr2R_6_18725001 chr2R_18725001 RAL-307_125b 1389 chr2R 18727074 18727101 chr2R 18727262 18727317 16 214 6.5 11.5 9.0 1.6 243 chr2R 18727074 intron Hs3st-A + chr2R 18727196 intron Hs3st-A + chr2R 18727317 intron Hs3st-A + chr2R_16_18725001 chr2R_18725001 RAL-307_125b 1390 chr2R 18736739 18736781 chr2R 18736914 18736956 25 171 16.0 13.0 14.5 1.6 217 chr2R 18736739 intron Hs3st-A + chr2R 18736848 intron Hs3st-A + chr2R 18736956 intron Hs3st-A + chr2R_25_18735001 chr2R_18735001 RAL-307_125b 1391 chr2R 18738167 18738233 chr2R 18738293 18738359 27 125 0.0 10.5 5.2 4.4 192 chr2R 18738167 intron Hs3st-A + chr2R 18738263 intron Hs3st-A + chr2R 18738359 intron Hs3st-A + chr2R_27_18735001 chr2R_18735001 RAL-307_125b 1392 chr2R 18769589 18769615 chr2R 18769746 18769752 13 155 13.0 9.0 11.0 1.1 163 chr2R 18769589 intron Mctp + chr2R 18769670 intron Mctp + chr2R 18769752 intron Mctp + chr2R_13_18765001 chr2R_18765001 RAL-307_125b 1393 chr2R 18835723 18835753 chr2R 18835855 18835885 16 132 20.5 0.0 10.2 1.4 162 chr2R 18835723 intron CG15083 + chr2R 18835804 intron CG15083 + chr2R 18835885 intron CG15083 + chr2R_16_18835001 chr2R_18835001 RAL-307_125b 1394 chr2R 18862266 18862405 chr2R 18862399 18862523 12 139 0.0 0.0 0.0 12.0 257 chr2R 18862266 intergenic Jheh3 - chr2R 18862394 intergenic Jheh3 -,CG43069 + chr2R 18862523 intergenic CG43069 +,Jheh3 - chr2R_12_18860001 chr2R_18860001 RAL-307_125b 1395 chr2R 18953114 18953188 chr2R 18953251 18953325 24 135 7.0 7.0 7.0 3.0 211 chr2R 18953114 intron sano + chr2R 18953220 intron sano + chr2R 18953325 intron sano + chr2R_24_18950001 chr2R_18950001 RAL-307_125b 1396 chr2R 19026015 19026055 chr2R 19026191 19026231 20 175 14.0 8.0 11.0 1.7 216 chr2R 19026015 exon 5-HT1B - chr2R 19026123 intron 5-HT1B - chr2R 19026231 intron 5-HT1B - chr2R_20_19025001 chr2R_19025001 RAL-307_125b 1397 chr2R 19065406 19065414 chr2R 19066383 19066391 5 977 30.0 9.5 19.8 0.2 985 chr2R 19065406 intergenic not near genes chr2R 19065898 intergenic not near genes chr2R 19066391 intergenic not near genes chr2R_5_19065001 chr2R_19065001 RAL-307_125b 1398 chr2R 19065416 19065479 chr2R 19066382 19066456 29 972 9.5 9.0 9.2 2.8 1040 chr2R 19065416 intergenic not near genes chr2R 19065936 intergenic not near genes chr2R 19066456 intergenic not near genes chr2R_29_19065001 chr2R_19065001 RAL-307_125b 1399 chr2R 19103361 19103429 chr2R 19103501 19103560 19 133 10.0 8.5 9.2 1.9 199 chr2R 19103361 intron 5-HT1A + chr2R 19103460 intron 5-HT1A + chr2R 19103560 intron 5-HT1A + chr2R_19_19100001 chr2R_19100001 RAL-307_125b 1400 chr2R 19300919 19300988 chr2R 19301052 19301121 47 133 0.0 9.0 4.5 8.5 202 chr2R 19300919 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301121 intron Tab2 + chr2R_47_19300001 chr2R_19300001 RAL-307_125b 1401 chr2R 19376110 19376115 chr2R 19376353 19376358 6 243 8.5 14.0 11.2 0.5 248 chr2R 19376110 intron CG10062 + chr2R 19376234 intron CG10062 + chr2R 19376358 intron CG10062 + chr2R_6_19375001 chr2R_19375001 RAL-307_125b 1402 chr2R 19383972 19384037 chr2R 19384130 19384195 23 155 9.0 10.0 9.5 2.2 223 chr2R 19383972 intron CG10073 + chr2R 19384084 exon CG10073 + chr2R 19384195 exon CG10073 + chr2R_23_19380001 chr2R_19380001 RAL-307_125b 1403 chr2R 19384907 19384911 chr2R 19385045 19385049 6 138 28.5 0.0 14.2 0.4 142 chr2R 19384907 3` UTR CG10073 + chr2R 19384978 intergenic CG10073 + chr2R 19385049 intergenic CG10073 + chr2R_6_19380001 chr2R_19380001 RAL-307_125b 1404 chr2R 19385100 19385135 chr2R 19385693 19385728 14 592 0.0 16.5 8.2 1.5 628 chr2R 19385100 intergenic CG10073 + chr2R 19385414 intergenic CG10073 + chr2R 19385728 intergenic CG10081 + chr2R_14_19385001 chr2R_19385001 RAL-307_125b 1405 chr2R 19536422 19536425 chr2R 19536554 19536557 4 132 27.5 9.5 18.5 0.2 135 chr2R 19536422 intron sm - chr2R 19536490 intron sm - chr2R 19536557 intron sm - chr2R_4_19535001 chr2R_19535001 RAL-307_125b 1406 chr2R 19536436 19536494 chr2R 19536553 19536626 38 129 8.5 9.5 9.0 3.8 190 chr2R 19536436 intron sm - chr2R 19536531 intron sm - chr2R 19536626 intron sm - chr2R_38_19535001 chr2R_19535001 RAL-307_125b 1407 chr2R 19601221 19601296 chr2R 19601361 19601426 40 138 8.5 13.5 11.0 3.3 205 chr2R 19601221 intron sm - chr2R 19601324 intron sm - chr2R 19601426 intron sm - chr2R_40_19600001 chr2R_19600001 RAL-307_125b 1408 chr2R 19715821 19715857 chr2R 19723327 19723376 blood 17 7516 12.0 8.5 10.2 1.5 7555 chr2R 19715821 intergenic not near genes chr2R 19719598 intergenic not near genes chr2R 19723376 intergenic not near genes chr2R_17_19715001 chr2R_19715001 RAL-307_125b 1409 chr2R 19773964 19774036 chr2R 19774127 19774199 27 161 7.0 7.0 7.0 3.4 235 chr2R 19773964 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774199 intergenic not near genes chr2R_27_19770001 chr2R_19770001 RAL-307_125b 1410 chr2R 19776565 19776621 chr2R 19779938 19779981 jockey 19 3372 9.0 19.5 14.2 1.2 3416 chr2R 19776565 intergenic not near genes chr2R 19778273 intergenic not near genes chr2R 19779981 intergenic not near genes chr2R_19_19775001 chr2R_19775001 RAL-307_125b 1411 chr2R 19896071 19896094 chr2R 19896209 19896212 7 136 8.5 5.0 6.8 0.9 141 chr2R 19896071 intergenic not near genes chr2R 19896142 intergenic not near genes chr2R 19896212 intergenic not near genes chr2R_7_19895001 chr2R_19895001 RAL-307_125b 1412 chr2R 19896103 19896133 chr2R 19896205 19896261 11 130 4.0 4.5 4.2 2.1 158 chr2R 19896103 intergenic not near genes chr2R 19896182 intergenic not near genes chr2R 19896261 intergenic not near genes chr2R_11_19895001 chr2R_19895001 RAL-307_125b 1413 chr2R 19914806 19914819 chr2R 19922268 19922280 mdg1 6 7462 14.0 8.5 11.2 0.5 7474 chr2R 19914806 intergenic not near genes chr2R 19918543 intergenic not near genes chr2R 19922280 intergenic not near genes chr2R_6_19915001 chr2R_19915001 RAL-307_125b 1414 chr2R 19914823 19914857 chr2R 19922263 19922314 mdg1 9 7457 10.0 8.0 9.0 0.9 7491 chr2R 19914823 intergenic not near genes chr2R 19918568 intergenic not near genes chr2R 19922314 intergenic not near genes chr2R_9_19915001 chr2R_19915001 RAL-307_125b 1415 chr2R 19957404 19957461 chr2R 19962636 19962697 copia 15 5234 4.0 5.5 4.8 2.6 5293 chr2R 19957404 intergenic CG44623 + chr2R 19960050 intergenic not near genes chr2R 19962697 intergenic not near genes chr2R_15_19960001 chr2R_19960001 RAL-307_125b 1416 chr2R 20031860 20031882 chr2R 20032006 20032023 11 145 25.0 11.0 18.0 0.6 163 chr2R 20031860 intergenic not near genes chr2R 20031942 intergenic not near genes chr2R 20032023 intergenic not near genes chr2R_11_20030001 chr2R_20030001 RAL-307_125b 1417 chr2R 20031883 20031936 chr2R 20032004 20032082 17 142 9.5 10.5 10.0 1.5 199 chr2R 20031883 intergenic not near genes chr2R 20031982 intergenic not near genes chr2R 20032082 intergenic not near genes chr2R_17_20030001 chr2R_20030001 RAL-307_125b 1418 chr2R 20069192 20069253 chr2R 20071875 20071941 opus 24 2682 0.0 2.5 1.2 10.9 2749 chr2R 20069192 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071941 intergenic not near genes chr2R_24_20070001 chr2R_20070001 RAL-307_125b 1419 chr2R 20118859 20118905 chr2R 20118961 20119018 21 126 2.5 5.0 3.8 4.4 159 chr2R 20118859 intergenic not near genes chr2R 20118938 intergenic not near genes chr2R 20119018 intergenic not near genes chr2R_21_20115001 chr2R_20115001 RAL-307_125b 1420 chr2R 20125725 20125742 chr2R 20125814 20125868 12 123 8.0 13.5 10.8 1.0 143 chr2R 20125725 intergenic not near genes chr2R 20125796 intergenic not near genes chr2R 20125868 intergenic not near genes chr2R_12_20125001 chr2R_20125001 RAL-307_125b 1421 chr2R 20174608 20174673 chr2R 20174734 20174773 16 120 3.0 9.0 6.0 2.3 165 chr2R 20174608 intergenic not near genes chr2R 20174690 intergenic not near genes chr2R 20174773 intergenic not near genes chr2R_16_20170001 chr2R_20170001 RAL-307_125b 1422 chr2R 20178975 20179038 chr2R 20179103 20179166 17 125 9.0 10.5 9.8 1.6 191 chr2R 20178975 intergenic not near genes chr2R 20179070 intergenic not near genes chr2R 20179166 intergenic not near genes chr2R_17_20175001 chr2R_20175001 RAL-307_125b 1423 chr2R 20223911 20223979 chr2R 20224041 20224104 34 133 8.5 10.5 9.5 3.2 193 chr2R 20223911 intergenic not near genes chr2R 20224008 intergenic not near genes chr2R 20224104 intergenic not near genes chr2R_34_20220001 chr2R_20220001 RAL-307_125b 1424 chr2R 20338713 20338767 chr2R 20338843 20338897 11 130 17.0 0.5 8.8 1.1 184 chr2R 20338713 intergenic not near genes chr2R 20338805 intergenic not near genes chr2R 20338897 intergenic not near genes chr2R_11_20335001 chr2R_20335001 RAL-307_125b 1425 chr2R 20368469 20368495 chr2R 20377682 20377708 roo 12 9213 20.0 13.0 16.5 0.7 9239 chr2R 20368469 intergenic not near genes chr2R 20373088 intergenic not near genes chr2R 20377708 intergenic not near genes chr2R_12_20370001 chr2R_20370001 RAL-307_125b 1426 chr2R 20379143 20379146 chr2R 20379250 20379278 4 126 10.5 1.5 6.0 0.6 135 chr2R 20379143 intergenic not near genes chr2R 20379210 intergenic not near genes chr2R 20379278 intergenic not near genes chr2R_4_20375001 chr2R_20375001 RAL-307_125b 1427 chr2R 20382285 20382350 chr2R 20382419 20382481 24 130 9.5 4.5 7.0 3.0 196 chr2R 20382285 intergenic not near genes chr2R 20382383 intergenic not near genes chr2R 20382481 intergenic not near genes chr2R_24_20380001 chr2R_20380001 RAL-307_125b 1428 chr2R 20405036 20405111 chr2R 20406002 20406031 25 959 9.5 5.5 7.5 2.9 995 chr2R 20405036 intergenic not near genes chr2R 20405534 intergenic not near genes chr2R 20406031 intergenic not near genes chr2R_25_20405001 chr2R_20405001 RAL-307_125b 1429 chr2R 20422521 20422590 chr2R 20422650 20422706 17 128 5.5 4.5 5.0 2.8 185 chr2R 20422521 intergenic not near genes chr2R 20422614 intergenic not near genes chr2R 20422706 intergenic not near genes chr2R_17_20420001 chr2R_20420001 RAL-307_125b 1430 chr2R 20424373 20424445 chr2R 20424504 20424537 21 125 9.0 11.5 10.2 1.9 164 chr2R 20424373 5` UTR CG12484 + chr2R 20424455 5` UTR CG12484 + chr2R 20424537 5` UTR CG12484 + chr2R_21_20420001 chr2R_20420001 RAL-307_125b 1431 chr2R 20434044 20434103 chr2R 20434181 20434239 9 130 0.0 7.0 3.5 2.0 195 chr2R 20434044 intron CG12484 + chr2R 20434142 intron CG12484 + chr2R 20434239 intron CG12484 + chr2R_9_20430001 chr2R_20430001 RAL-307_125b 1432 chr2R 20502250 20502274 chr2R 20502414 20502438 12 164 15.5 9.0 12.2 0.9 188 chr2R 20502250 intergenic not near genes chr2R 20502344 intergenic not near genes chr2R 20502438 intergenic not near genes chr2R_12_20500001 chr2R_20500001 RAL-307_125b 1433 chr2R 20502275 20502315 chr2R 20502411 20502479 24 157 7.0 9.0 8.0 2.7 204 chr2R 20502275 intergenic not near genes chr2R 20502377 intergenic not near genes chr2R 20502479 intergenic not near genes chr2R_24_20500001 chr2R_20500001 RAL-307_125b 1434 chr2R 20506913 20506934 chr2R 20507038 20507066 14 131 0.0 1.5 0.8 7.8 153 chr2R 20506913 intergenic CR44645 + chr2R 20506990 intergenic CR44645 + chr2R 20507066 intergenic CR44645 + chr2R_14_20505001 chr2R_20505001 RAL-307_125b 1435 chr2R 20523003 20523015 chr2R 20523163 20523176 4 160 12.0 9.0 10.5 0.3 173 chr2R 20523003 intergenic not near genes chr2R 20523090 intergenic not near genes chr2R 20523176 intergenic not near genes chr2R_4_20520001 chr2R_20520001 RAL-307_125b 1436 chr2R 20523016 20523027 chr2R 20523157 20523162 6 150 8.5 7.0 7.8 0.7 146 chr2R 20523016 intergenic not near genes chr2R 20523089 intergenic not near genes chr2R 20523162 intergenic not near genes chr2R_6_20520001 chr2R_20520001 RAL-307_125b 1437 chr2R 20523031 20523071 chr2R 20523151 20523185 10 137 2.5 6.5 4.5 1.8 154 chr2R 20523031 intergenic not near genes chr2R 20523108 intergenic not near genes chr2R 20523185 intergenic not near genes chr2R_10_20520001 chr2R_20520001 RAL-307_125b 1438 chr2R 20572527 20572585 chr2R 20572662 20572725 26 136 9.0 9.5 9.2 2.5 198 chr2R 20572527 intron qsm - chr2R 20572626 intron qsm - chr2R 20572725 intron qsm - chr2R_26_20570001 chr2R_20570001 RAL-307_125b 1439 chr2R 20590616 20590663 chr2R 20590745 20590792 22 128 8.5 7.5 8.0 2.4 176 chr2R 20590616 intron bl + chr2R 20590704 intron bl + chr2R 20590792 intron bl + chr2R_22_20590001 chr2R_20590001 RAL-307_125b 1440 chr2R 20601668 20601755 chr2R 20601803 20601890 14 134 4.0 6.0 5.0 2.3 222 chr2R 20601668 intron bl + chr2R 20601779 intron bl + chr2R 20601890 intron bl + chr2R_14_20600001 chr2R_20600001 RAL-307_125b 1441 chr2R 20667324 20667340 chr2R 20667482 20667486 6 158 10.0 20.5 15.2 0.4 162 chr2R 20667324 intergenic Fem-1 -,exu - chr2R 20667405 intergenic exu -,Fem-1 - chr2R 20667486 3` UTR exu - chr2R_6_20665001 chr2R_20665001 RAL-307_125b 1442 chr2R 20691138 20691159 chr2R 20691601 20691622 15 463 13.0 6.5 9.8 1.4 484 chr2R 20691138 intergenic not near genes chr2R 20691380 intergenic not near genes chr2R 20691622 intergenic CR44659 + chr2R_15_20690001 chr2R_20690001 RAL-307_125b 1443 chr2R 20739407 20739469 chr2R 20744225 20744287 F-element 15 4810 5.5 6.0 5.8 2.2 4880 chr2R 20739407 intron dpr + chr2R 20741847 intron dpr + chr2R 20744287 intron dpr + chr2R_15_20740001 chr2R_20740001 RAL-307_125b 1444 chr2R 20757441 20757457 chr2R 20757549 20757584 6 123 3.0 15.5 9.2 0.6 143 chr2R 20757441 intergenic not near genes chr2R 20757512 intergenic not near genes chr2R 20757584 intergenic not near genes chr2R_6_20755001 chr2R_20755001 RAL-307_125b 1445 chr2R 20783261 20783323 chr2R 20788083 20788144 F-element 32 4819 13.5 9.5 11.5 2.6 4883 chr2R 20783261 intergenic not near genes chr2R 20785702 intergenic not near genes chr2R 20788144 intergenic CG43666 - chr2R_32_20785001 chr2R_20785001 RAL-307_125b 1446 chr2R 20812202 20812213 chr2R 20812332 20812343 9 130 23.0 12.0 17.5 0.5 141 chr2R 20812202 intergenic not near genes chr2R 20812272 intergenic not near genes chr2R 20812343 intergenic not near genes chr2R_9_20810001 chr2R_20810001 RAL-307_125b 1447 chr2R 20812214 20812274 chr2R 20812330 20812384 40 126 9.5 12.0 10.8 3.4 170 chr2R 20812214 intergenic not near genes chr2R 20812299 intergenic not near genes chr2R 20812384 intergenic not near genes chr2R_40_20810001 chr2R_20810001 RAL-307_125b 1448 chr2R 20817501 20817515 chr2R 20818033 20818070 5 545 14.5 7.5 11.0 0.4 569 chr2R 20817501 intergenic not near genes chr2R 20817786 intergenic not near genes chr2R 20818070 intergenic not near genes chr2R_5_20815001 chr2R_20815001 RAL-307_125b 1449 chr2R 20942336 20942374 chr2R 20942469 20942507 16 132 0.0 7.5 3.8 3.3 171 chr2R 20942336 intergenic not near genes chr2R 20942422 intergenic not near genes chr2R 20942507 intergenic not near genes chr2R_16_20940001 chr2R_20940001 RAL-307_125b 1450 chr2R 20951286 20951312 chr2R 20951412 20951446 9 131 10.5 7.0 8.8 0.9 160 chr2R 20951286 intergenic CG33704 + chr2R 20951366 intergenic CG33704 + chr2R 20951446 intergenic CG33704 + chr2R_9_20950001 chr2R_20950001 RAL-307_125b 1451 chr2R 20962863 20962939 chr2R 20963011 20963061 37 145 10.0 11.5 10.8 3.1 198 chr2R 20962863 intergenic not near genes chr2R 20962962 intergenic not near genes chr2R 20963061 intergenic not near genes chr2R_37_20960001 chr2R_20960001 RAL-307_125b 1452 chr2R 20966978 20967055 chr2R 20967105 20967182 15 127 10.0 3.0 6.5 2.0 204 chr2R 20966978 intergenic not near genes chr2R 20967080 intergenic not near genes chr2R 20967182 intergenic not near genes chr2R_15_20965001 chr2R_20965001 RAL-307_125b 1453 chr2R 21075633 21075662 chr2R 21075770 21075778 7 134 22.5 7.5 15.0 0.4 145 chr2R 21075633 intron Treh + chr2R 21075706 intron Treh + chr2R 21075778 intron Treh + chr2R_7_21075001 chr2R_21075001 RAL-307_125b 1454 chr2R 21075663 21075709 chr2R 21075767 21075846 27 128 11.5 6.5 9.0 2.7 183 chr2R 21075663 intron Treh + chr2R 21075754 intron Treh + chr2R 21075846 intron Treh + chr2R_27_21075001 chr2R_21075001 RAL-307_125b 1455 chr2R 21080259 21080283 chr2R 21080387 21080398 16 126 14.5 4.5 9.5 1.5 139 chr2R 21080259 intron Treh + chr2R 21080328 intron Treh + chr2R 21080398 intron Treh + chr2R_16_21080001 chr2R_21080001 RAL-307_125b 1456 chr2R 21103487 21103550 chr2R 21103617 21103680 28 128 6.0 13.5 9.8 2.6 193 chr2R 21103487 intron ktub + chr2R 21103584 intron ktub + chr2R 21103680 intron ktub + chr2R_28_21100001 chr2R_21100001 RAL-307_125b 1457 chr2R 21151100 21151144 chr2R 21153762 21153827 opus 21 2675 0.5 6.5 3.5 4.7 2727 chr2R 21151100 intron CG30389 - chr2R 21152464 intron CG30389 - chr2R 21153827 intron CG30389 - chr2R_21_21150001 chr2R_21150001 RAL-307_125b 1458 chr2R 21155912 21155922 chr2R 21156283 21156293 10 370 13.5 1.0 7.2 1.2 381 chr2R 21155912 exon CG30389 - chr2R 21156102 intron CG30389 - chr2R 21156293 intron CG30389 - chr2R_10_21155001 chr2R_21155001 RAL-307_125b 1459 chr2R 21158848 21158909 chr2R 21159022 21159083 27 173 5.5 11.5 8.5 2.8 235 chr2R 21158848 intron CG30389 - chr2R 21158966 intron CG30389 - chr2R 21159083 intron CG30389 - chr2R_27_21155001 chr2R_21155001 RAL-307_125b 1460 chr2R 21258454 21258466 chr2R 21258582 21258594 4 128 0.0 11.5 5.8 0.6 140 chr2R 21258454 intron Rgk3 + chr2R 21258524 intron Rgk3 + chr2R 21258594 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 RAL-307_125b 1461 chr2R 21259626 21259664 chr2R 21259755 21259756 9 121 11.0 10.5 10.8 0.8 130 chr2R 21259626 intron Rgk3 + chr2R 21259691 intron Rgk3 + chr2R 21259756 intron Rgk3 + chr2R_9_21255001 chr2R_21255001 RAL-307_125b 1462 chr2R 21273930 21273996 chr2R 21274053 21274132 21 131 4.0 9.0 6.5 2.8 202 chr2R 21273930 intron Rgk3 + chr2R 21274031 intron Rgk3 + chr2R 21274132 intron Rgk3 + chr2R_21_21270001 chr2R_21270001 RAL-307_125b 1463 chr2R 21285383 21285436 chr2R 21285510 21285563 24 125 16.5 13.0 14.8 1.5 180 chr2R 21285383 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285473 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285563 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_24_21285001 chr2R_21285001 RAL-307_125b 1464 chr2R 21363108 21363184 chr2R 21363246 21363323 9 135 0.0 9.0 4.5 1.6 215 chr2R 21363108 intron cv-2 - chr2R 21363216 intron cv-2 - chr2R 21363323 intron cv-2 - chr2R_9_21360001 chr2R_21360001 RAL-307_125b 1465 chr2R 21364641 21364703 chr2R 21364838 21364902 4 198 5.0 5.5 5.2 0.6 261 chr2R 21364641 intron cv-2 - chr2R 21364772 intron cv-2 - chr2R 21364902 intron cv-2 - chr2R_4_21360001 chr2R_21360001 RAL-307_125b 1466 chr2R 21381889 21381910 chr2R 21382026 21382047 11 137 14.5 1.0 7.8 1.2 158 chr2R 21381889 intergenic not near genes chr2R 21381968 intergenic not near genes chr2R 21382047 intergenic not near genes chr2R_11_21380001 chr2R_21380001 RAL-307_125b 1467 chr2R 21408328 21408406 chr2R 21408470 21408548 19 138 12.5 2.5 7.5 2.2 220 chr2R 21408328 intron Sdc - chr2R 21408438 intron Sdc - chr2R 21408548 intron Sdc - chr2R_19_21405001 chr2R_21405001 RAL-307_125b 1468 chr2R 21417226 21417236 chr2R 21417378 21417388 8 152 29.5 0.0 14.8 0.5 162 chr2R 21417226 intron Sdc - chr2R 21417307 intron Sdc - chr2R 21417388 intron Sdc - chr2R_8_21415001 chr2R_21415001 RAL-307_125b 1469 chr2R 21421293 21421349 chr2R 21421422 21421478 40 126 19.0 15.0 17.0 2.2 185 chr2R 21421293 intron Sdc - chr2R 21421386 intron Sdc - chr2R 21421478 intron Sdc - chr2R_40_21420001 chr2R_21420001 RAL-307_125b 1470 chr2R 21455036 21455096 chr2R 21455450 21455479 14 406 5.0 9.5 7.2 1.7 443 chr2R 21455036 intron Sdc - chr2R 21455258 intron Sdc - chr2R 21455479 intron Sdc - chr2R_14_21455001 chr2R_21455001 RAL-307_125b 1471 chr2R 21467714 21467722 chr2R 21467850 21467858 5 136 9.0 0.0 4.5 0.9 144 chr2R 21467714 intron Sdc - chr2R 21467786 intron Sdc - chr2R 21467858 intron Sdc - chr2R_5_21465001 chr2R_21465001 RAL-307_125b 1472 chr2R 21592802 21592851 chr2R 21592932 21592952 6 120 9.5 10.0 9.8 0.6 150 chr2R 21592802 intergenic not near genes chr2R 21592877 intergenic not near genes chr2R 21592952 intergenic not near genes chr2R_6_21590001 chr2R_21590001 RAL-307_125b 1473 chr2R 21611716 21611784 chr2R 21611876 21611920 25 155 8.5 10.0 9.2 2.5 204 chr2R 21611716 intron CG15673 - chr2R 21611818 intron CG15673 - chr2R 21611920 intron CG15673 - chr2R_25_21610001 chr2R_21610001 RAL-307_125b 1474 chr2R 21616023 21616032 chr2R 21617374 21617383 5 1351 34.0 31.0 32.5 0.1 1360 chr2R 21616023 exon CG18870 - chr2R 21616703 exon CG18870 - chr2R 21617383 exon clt - chr2R_5_21615001 chr2R_21615001 RAL-307_125b 1475 chr2R 21616033 21616095 chr2R 21617369 21617424 20 1342 24.5 30.5 27.5 0.7 1391 chr2R 21616033 exon CG18870 - chr2R 21616728 5` UTR CG18870 - chr2R 21617424 exon clt - chr2R_20_21615001 chr2R_21615001 RAL-307_125b 1476 chr2R 21615426 21615467 chr2R 21619821 21619851 20 4385 62.0 80.5 71.2 0.3 4425 chr2R 21615426 3` UTR CG18870 - chr2R 21617638 exon clt - chr2R 21619851 3` UTR PTP-ER - chr2R_20_21615001 chr2R_21615001 RAL-307_125b 1477 chr2R 21615424 21615502 chr2R 21619854 21619886 21 4393 62.5 69.5 66.0 0.3 4462 chr2R 21615424 3` UTR CG18870 - chr2R 21617655 exon clt - chr2R 21619886 3` UTR PTP-ER - chr2R_21_21615001 chr2R_21615001 RAL-307_125b 1478 chr2R 21721551 21721611 chr2R 21721664 21721748 26 132 12.5 1.0 6.8 3.3 197 chr2R 21721551 intron LBR + chr2R 21721650 intron LBR + chr2R 21721748 intron LBR + chr2R_26_21720001 chr2R_21720001 RAL-307_125b 1479 chr2R 21735643 21735711 chr2R 21735856 21735919 34 210 11.0 8.5 9.8 3.1 276 chr2R 21735643 intergenic not near genes chr2R 21735781 intergenic not near genes chr2R 21735919 intergenic not near genes chr2R_34_21735001 chr2R_21735001 RAL-307_125b 1480 chr2R 21738255 21738311 chr2R 21747437 21747491 roo 13 9179 2.0 2.5 2.2 4.1 9236 chr2R 21738255 intergenic not near genes chr2R 21742873 intergenic not near genes chr2R 21747491 intergenic not near genes chr2R_13_21740001 chr2R_21740001 RAL-307_125b 1481 chr2R 21753046 21753110 chr2R 21753581 21753645 roo 36 533 7.5 18.0 12.8 2.6 599 chr2R 21753046 intergenic not near genes chr2R 21753346 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_36_21750001 chr2R_21750001 RAL-307_125b 1482 chr2R 21777378 21777444 chr2R 21777511 21777577 23 132 11.5 10.5 11.0 1.9 199 chr2R 21777378 intergenic not near genes chr2R 21777478 intergenic not near genes chr2R 21777577 intergenic not near genes chr2R_23_21775001 chr2R_21775001 RAL-307_125b 1483 chr2R 21796411 21796431 chr2R 21796545 21796565 16 134 23.0 12.5 17.8 0.9 154 chr2R 21796411 5` UTR CG34204 + chr2R 21796488 5` UTR CG34204 + chr2R 21796565 exon CG34204 + chr2R_16_21795001 chr2R_21795001 RAL-307_125b 1484 chr2R 21796433 21796480 chr2R 21796542 21796614 30 130 11.5 11.5 11.5 2.4 181 chr2R 21796433 5` UTR CG34204 + chr2R 21796524 5` UTR CG34204 + chr2R 21796614 exon CG34204 + chr2R_30_21795001 chr2R_21795001 RAL-307_125b 1485 chr2R 21809481 21809545 chr2R 21817771 21817809 roo 33 8289 10.0 14.0 12.0 2.5 8328 chr2R 21809481 intergenic not near genes chr2R 21813645 intergenic not near genes chr2R 21817809 intergenic not near genes chr2R_33_21810001 chr2R_21810001 RAL-307_125b 1486 chr2R 21818834 21818878 chr2R 21818971 21819016 9 134 15.0 2.5 8.8 0.9 182 chr2R 21818834 intergenic not near genes chr2R 21818925 intergenic not near genes chr2R 21819016 intergenic not near genes chr2R_9_21815001 chr2R_21815001 RAL-307_125b 1487 chr2R 21818879 21818907 chr2R 21818966 21819045 17 135 9.5 2.5 6.0 2.4 166 chr2R 21818879 intergenic not near genes chr2R 21818962 intergenic not near genes chr2R 21819045 intergenic not near genes chr2R_17_21815001 chr2R_21815001 RAL-307_125b 1488 chr2R 21855565 21855609 chr2R 21855692 21855736 19 125 9.5 6.5 8.0 2.1 171 chr2R 21855565 intergenic not near genes chr2R 21855650 intergenic not near genes chr2R 21855736 intergenic not near genes chr2R_19_21855001 chr2R_21855001 RAL-307_125b 1489 chr2R 21868962 21868988 chr2R 21869102 21869128 11 140 16.0 0.0 8.0 1.2 166 chr2R 21868962 intergenic not near genes chr2R 21869045 intergenic not near genes chr2R 21869128 intergenic not near genes chr2R_11_21865001 chr2R_21865001 RAL-307_125b 1490 chr2R 21888246 21888289 chr2R 21888407 21888450 10 159 2.5 14.5 8.5 1.1 204 chr2R 21888246 intron Fili + chr2R 21888348 intron Fili + chr2R 21888450 intron Fili + chr2R_10_21885001 chr2R_21885001 RAL-307_125b 1491 chr2R 21901547 21901555 chr2R 21901674 21901682 7 127 5.0 0.5 2.8 1.8 135 chr2R 21901547 intron Fili + chr2R 21901614 intron Fili + chr2R 21901682 intron Fili + chr2R_7_21900001 chr2R_21900001 RAL-307_125b 1492 chr2R 21906225 21906301 chr2R 21906376 21906452 23 151 5.0 2.5 3.8 4.8 227 chr2R 21906225 intron Fili + chr2R 21906338 intron Fili + chr2R 21906452 intron Fili + chr2R_23_21905001 chr2R_21905001 RAL-307_125b 1493 chr2R 21916069 21916107 chr2R 21916196 21916228 10 126 10.0 0.0 5.0 1.7 159 chr2R 21916069 intron Fili + chr2R 21916148 intron Fili + chr2R 21916228 intron Fili + chr2R_10_21915001 chr2R_21915001 RAL-307_125b 1494 chr2R 21935600 21935673 chr2R 21935729 21935802 42 127 9.5 8.5 9.0 4.2 202 chr2R 21935600 intron,intron Fili +,CG43742 - chr2R 21935701 intron,exon Fili +,CG43742 - chr2R 21935802 intron,exon Fili +,CG43742 - chr2R_42_21935001 chr2R_21935001 RAL-307_125b 1495 chr2R 22004249 22004318 chr2R 22004392 22004462 14 141 10.0 4.5 7.2 1.7 213 chr2R 22004249 intron CG34370 - chr2R 22004356 intron CG34370 - chr2R 22004462 intron CG34370 - chr2R_14_22000001 chr2R_22000001 RAL-307_125b 1496 chr2R 22029476 22029515 chr2R 22029604 22029643 15 128 16.5 0.0 8.2 1.6 167 chr2R 22029476 intron CG34370 - chr2R 22029560 intron CG34370 - chr2R 22029643 intron CG34370 - chr2R_15_22025001 chr2R_22025001 RAL-307_125b 1497 chr2R 22035492 22035569 chr2R 22035629 22035706 55 135 15.0 21.0 18.0 2.9 214 chr2R 22035492 intron,exon CG34370 -,CG9308 + chr2R 22035599 intron,3` UTR CG34370 -,CG9308 + chr2R 22035706 intron CG34370 - chr2R_55_22035001 chr2R_22035001 RAL-307_125b 1498 chr2R 22034396 22034414 chr2R 22035932 22035999 25 1541 63.0 71.5 67.2 0.4 1603 chr2R 22034396 intron CG34370 - chr2R 22035198 intron,exon CG34370 -,CG9308 + chr2R 22035999 intron CG34370 - chr2R_25_22035001 chr2R_22035001 RAL-307_125b 1499 chr2R 22072631 22072712 chr2R 22072766 22072847 20 143 9.0 7.0 8.0 2.2 216 chr2R 22072631 exon CG11474 - chr2R 22072739 intron CG11474 - chr2R 22072847 exon CG11474 - chr2R_20_22070001 chr2R_22070001 RAL-307_125b 1500 chr2R 22132241 22132286 chr2R 22132371 22132416 18 130 10.0 10.0 10.0 1.6 175 chr2R 22132241 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132416 intergenic not near genes chr2R_18_22130001 chr2R_22130001 RAL-307_125b 1501 chr2R 22185623 22185705 chr2R 22185772 22185854 14 146 4.0 0.0 2.0 4.7 231 chr2R 22185623 exon MED16 + chr2R 22185738 3` UTR MED16 + chr2R 22185854 3` UTR MED16 + chr2R_14_22185001 chr2R_22185001 RAL-307_125b 1502 chr2R 22189393 22189473 chr2R 22189571 22189641 23 176 8.0 0.0 4.0 4.6 248 chr2R 22189393 3` UTR Vps35 + chr2R 22189517 3` UTR Vps35 + chr2R 22189641 3` UTR Vps35 + chr2R_23_22185001 chr2R_22185001 RAL-307_125b 1503 chr2R 22292133 22292207 chr2R 22292372 22292446 28 236 5.0 12.5 8.8 2.9 313 chr2R 22292133 5` UTR CR43422 + chr2R 22292290 5` UTR CR43422 + chr2R 22292446 intergenic CR43422 + chr2R_28_22290001 chr2R_22290001 RAL-307_125b 1504 chr2R 22349653 22349693 chr2R 22351487 22351527 jockey 12 1828 10.0 13.5 11.8 0.9 1874 chr2R 22349653 intron Liprin-gamma - chr2R 22350590 intron Liprin-gamma - chr2R 22351527 intron Liprin-gamma - chr2R_12_22350001 chr2R_22350001 RAL-307_125b 1505 chr2R 22349696 22349705 chr2R 22351479 22351514 jockey 7 1809 8.0 11.0 9.5 0.7 1818 chr2R 22349696 intron Liprin-gamma - chr2R 22350605 intron Liprin-gamma - chr2R 22351514 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-307_125b 1506 chr2R 22360151 22360211 chr2R 22360285 22360345 27 128 8.5 10.0 9.2 2.6 194 chr2R 22360151 intron Liprin-gamma - chr2R 22360248 intron Liprin-gamma - chr2R 22360345 intron Liprin-gamma - chr2R_27_22360001 chr2R_22360001 RAL-307_125b 1507 chr2R 22360341 22360352 chr2R 22360824 22360828 jockey 4 481 12.5 7.5 10.0 0.4 487 chr2R 22360341 intron Liprin-gamma - chr2R 22360584 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-307_125b 1508 chr2R 22374591 22374637 chr2R 22374728 22374774 22 137 5.5 8.5 7.0 2.8 183 chr2R 22374591 3` UTR CR44759 - chr2R 22374682 3` UTR CR44759 - chr2R 22374774 3` UTR CR44759 - chr2R_22_22370001 chr2R_22370001 RAL-307_125b 1509 chr2R 22380315 22380393 chr2R 22380456 22380511 33 139 7.5 0.0 3.8 6.9 196 chr2R 22380315 intron wrapper + chr2R 22380413 intron wrapper + chr2R 22380511 intron wrapper + chr2R_33_22380001 chr2R_22380001 RAL-307_125b 1510 chr2R 22382846 22382893 chr2R 22382977 22383004 16 126 11.5 18.0 14.8 1.0 158 chr2R 22382846 intergenic wrapper +,CG13506 + chr2R 22382925 intergenic CG13506 +,wrapper + chr2R 22383004 intergenic CG13506 +,wrapper + chr2R_16_22380001 chr2R_22380001 RAL-307_125b 1511 chr2R 22460330 22460403 chr2R 22460459 22460532 45 127 9.0 10.5 9.8 4.2 202 chr2R 22460330 intron CG10384 + chr2R 22460431 intron CG10384 + chr2R 22460532 intron CG10384 + chr2R_45_22460001 chr2R_22460001 RAL-307_125b 1512 chr2R 22503817 22503893 chr2R 22503962 22503992 24 141 4.5 10.0 7.2 2.9 175 chr2R 22503817 intron px - chr2R 22503904 intron px - chr2R 22503992 intron px - chr2R_24_22500001 chr2R_22500001 RAL-307_125b 1513 chr2R 22525707 22525775 chr2R 22529311 22529332 jockey 32 3600 7.5 8.0 7.8 3.6 3625 chr2R 22525707 intron px - chr2R 22527520 intron px - chr2R 22529332 intron px - chr2R_32_22525001 chr2R_22525001 RAL-307_125b 1514 chr2R 22580403 22580443 chr2R 22586603 22586638 diver 23 6198 14.0 7.0 10.5 2.0 6235 chr2R 22580403 intron dnr1 - chr2R 22583520 intron dnr1 - chr2R 22586638 intron dnr1 - chr2R_23_22580001 chr2R_22580001 RAL-307_125b 1515 chr2R 22588099 22588151 chr2R 22588244 22588266 12 140 10.5 8.0 9.2 1.2 167 chr2R 22588099 intron dnr1 - chr2R 22588182 intron dnr1 - chr2R 22588266 intron dnr1 - chr2R_12_22585001 chr2R_22585001 RAL-307_125b 1516 chr2R 22774925 22774941 chr2R 22775393 22775410 jockey 8 469 27.0 10.5 18.8 0.4 485 chr2R 22774925 intron CG42260 - chr2R 22775168 intron CG42260 - chr2R 22775410 intron CG42260 - chr2R_8_22775001 chr2R_22775001 RAL-307_125b 1517 chr2R 22774945 22774990 chr2R 22775390 22775442 jockey 20 466 13.5 10.5 12.0 1.5 497 chr2R 22774945 intron CG42260 - chr2R 22775194 intron CG42260 - chr2R 22775442 intron CG42260 - chr2R_20_22775001 chr2R_22775001 RAL-307_125b 1518 chr2R 22834751 22834773 chr2R 22834914 22834934 6 163 1.0 7.5 4.2 1.2 183 chr2R 22834751 intron CG12490 + chr2R 22834842 intron CG12490 + chr2R 22834934 intron CG12490 + chr2R_6_22830001 chr2R_22830001 RAL-307_125b 1519 chr2R 22834307 22834318 chr2R 22836296 22836312 6 1990 66.0 17.0 41.5 0.1 2005 chr2R 22834307 exon CG30265 + chr2R 22835310 exon CG12490 + chr2R 22836312 intron CG12490 + chr2R_6_22835001 chr2R_22835001 RAL-307_125b 1520 chr2R 22839445 22839525 chr2R 22839574 22839659 27 131 9.0 2.0 5.5 4.2 214 chr2R 22839445 intergenic CG9825 + chr2R 22839552 intergenic CG9825 + chr2R 22839659 intergenic CG9825 + chr2R_27_22835001 chr2R_22835001 RAL-307_125b 1521 chr2R 22843003 22843045 chr2R 22845019 22845061 flea 23 2016 13.5 13.5 13.5 1.6 2058 chr2R 22843003 intergenic CG9826 + chr2R 22844032 intergenic not near genes chr2R 22845061 intergenic not near genes chr2R_23_22840001 chr2R_22840001 RAL-307_125b 1522 chr2R 22941772 22941843 chr2R 22941901 22941966 43 128 13.0 18.0 15.5 2.6 194 chr2R 22941772 intergenic CG42694 + chr2R 22941869 intergenic CG42694 + chr2R 22941966 5` UTR CG42694 + chr2R_43_22940001 chr2R_22940001 RAL-307_125b 1523 chr2R 22953340 22953383 chr2R 22953484 22953526 12 143 6.5 6.0 6.2 1.7 186 chr2R 22953340 intron CR32835 - chr2R 22953433 3` UTR CR32835 - chr2R 22953526 3` UTR CR32835 - chr2R_12_22950001 chr2R_22950001 RAL-307_125b 1524 chr2R 22957002 22957062 chr2R 22957131 22957191 27 129 6.0 5.0 5.5 4.2 189 chr2R 22957002 intergenic CR44780 - chr2R 22957096 intergenic CR44780 - chr2R 22957191 3` UTR CR44780 - chr2R_27_22955001 chr2R_22955001 RAL-307_125b 1525 chr2R 22958776 22958805 chr2R 22963908 22963938 flea 6 5131 4.5 9.5 7.0 0.8 5162 chr2R 22958776 intergenic not near genes chr2R 22961357 intergenic not near genes chr2R 22963938 intergenic not near genes chr2R_6_22960001 chr2R_22960001 RAL-307_125b 1526 chr2R 23008777 23008825 chr2R 23008900 23008965 10 137 1.5 3.5 2.5 2.9 188 chr2R 23008777 intron twi + chr2R 23008871 intron twi + chr2R 23008965 intron twi + chr2R_10_23005001 chr2R_23005001 RAL-307_125b 1527 chr2R 23131306 23131368 chr2R 23131448 23131519 23 150 3.5 11.0 7.2 2.8 213 chr2R 23131306 intergenic not near genes chr2R 23131412 intergenic not near genes chr2R 23131519 intergenic not near genes chr2R_23_23130001 chr2R_23130001 RAL-307_125b 1528 chr2R 23134799 23134804 chr2R 23134932 23134937 4 133 4.5 9.0 6.8 0.5 138 chr2R 23134799 intergenic not near genes chr2R 23134868 intergenic not near genes chr2R 23134937 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RAL-307_125b 1529 chr2R 23134807 23134839 chr2R 23134922 23134944 8 124 1.0 8.5 4.8 1.4 137 chr2R 23134807 intergenic not near genes chr2R 23134876 intergenic not near genes chr2R 23134944 intergenic not near genes chr2R_8_23130001 chr2R_23130001 RAL-307_125b 1530 chr2R 23174993 23175065 chr2R 23175114 23175181 27 121 3.5 3.0 3.2 6.4 188 chr2R 23174993 intron CG34371 - chr2R 23175087 intron CG34371 - chr2R 23175181 intron CG34371 - chr2R_27_23175001 chr2R_23175001 RAL-307_125b 1531 chr2R 23184289 23184292 chr2R 23184349 23184422 5 100 2.0 8.0 5.0 0.8 133 chr2R 23184289 intron,intron CG34371 -,CG13539 + chr2R 23184356 intron,intron CG34371 -,CG13539 + chr2R 23184422 intron,5` UTR CG34371 -,CG13539 + chr2R_5_23180001 chr2R_23180001 RAL-307_125b 1532 chr2R 23186038 23186075 chr2R 23186233 23186270 22 194 16.5 6.5 11.5 1.8 232 chr2R 23186038 intron CG34371 - chr2R 23186154 intron CG34371 - chr2R 23186270 intron CG34371 - chr2R_22_23185001 chr2R_23185001 RAL-307_125b 1533 chr2R 23188507 23188580 chr2R 23188635 23188702 28 126 12.0 10.0 11.0 2.3 195 chr2R 23188507 intron CG34371 - chr2R 23188604 intron CG34371 - chr2R 23188702 intron CG34371 - chr2R_28_23185001 chr2R_23185001 RAL-307_125b 1534 chr2R 23189980 23190001 chr2R 23190110 23190110 6 126 11.0 0.5 5.8 0.9 130 chr2R 23189980 intron CG34371 - chr2R 23190045 intron CG34371 - chr2R 23190110 intron CG34371 - chr2R_6_23190001 chr2R_23190001 RAL-307_125b 1535 chr2R 23207804 23207851 chr2R 23207933 23207980 15 124 11.0 6.5 8.8 1.5 176 chr2R 23207804 intergenic not near genes chr2R 23207892 intergenic not near genes chr2R 23207980 intergenic not near genes chr2R_15_23205001 chr2R_23205001 RAL-307_125b 1536 chr2R 23231908 23231983 chr2R 23232079 23232150 17 171 6.0 7.0 6.5 2.3 242 chr2R 23231908 intergenic not near genes chr2R 23232029 intergenic not near genes chr2R 23232150 intergenic CG3092 + chr2R_17_23230001 chr2R_23230001 RAL-307_125b 1537 chr2R 23275604 23275682 chr2R 23275745 23275797 32 125 5.5 7.0 6.2 4.4 193 chr2R 23275604 intergenic ord - chr2R 23275700 intergenic ord - chr2R 23275797 intergenic ord - chr2R_32_23275001 chr2R_23275001 RAL-307_125b 1538 chr2R 23291282 23291335 chr2R 23291410 23291424 13 122 9.5 0.0 4.8 2.2 142 chr2R 23291282 3` UTR CR44783 - chr2R 23291353 3` UTR CR44783 - chr2R 23291424 intergenic CR44783 - chr2R_13_23290001 chr2R_23290001 RAL-307_125b 1539 chr2R 23349566 23349588 chr2R 23349882 23349899 4 315 16.0 6.5 11.2 0.3 333 chr2R 23349566 intergenic not near genes chr2R 23349732 intergenic not near genes chr2R 23349899 intergenic not near genes chr2R_4_23345001 chr2R_23345001 RAL-307_125b 1540 chr2R 23349601 23349633 chr2R 23349877 23349940 6 298 8.5 5.5 7.0 0.8 339 chr2R 23349601 intergenic not near genes chr2R 23349770 intergenic not near genes chr2R 23349940 intergenic not near genes chr2R_6_23345001 chr2R_23345001 RAL-307_125b 1541 chr2R 23356245 23356304 chr2R 23356372 23356383 36 128 11.0 8.5 9.8 3.3 138 chr2R 23356245 3` UTR Rpi + chr2R 23356314 3` UTR Rpi + chr2R 23356383 3` UTR,3` UTR Rpi +,CG3500 - chr2R_36_23355001 chr2R_23355001 RAL-307_125b 1542 chr2R 23393904 23393970 chr2R 23394299 23394348 33 402 3.0 6.0 4.5 6.0 444 chr2R 23393904 intron CG3530 - chr2R 23394126 intron CG3530 - chr2R 23394348 intron CG3530 - chr2R_33_23390001 chr2R_23390001 RAL-307_125b 1543 chr2R 23402587 23402637 chr2R 23407684 23407763 flea 21 5098 0.0 11.0 5.5 3.2 5176 chr2R 23402587 intergenic CG3520 - chr2R 23405175 intergenic not near genes chr2R 23407763 intergenic not near genes chr2R_21_23405001 chr2R_23405001 RAL-307_125b 1544 chr2R 23437184 23437222 chr2R 23437311 23437348 10 124 11.0 9.0 10.0 0.9 164 chr2R 23437184 intergenic not near genes chr2R 23437266 intergenic not near genes chr2R 23437348 intergenic not near genes chr2R_10_23435001 chr2R_23435001 RAL-307_125b 1545 chr2R 23529546 23529604 chr2R 23537151 23537210 412 11 7611 3.5 5.5 4.5 2.0 7664 chr2R 23529546 intron bw - chr2R 23533378 intron bw - chr2R 23537210 exon bw - chr2R_11_23530001 chr2R_23530001 RAL-307_125b 1546 chr2R 23588051 23588058 chr2R 23588175 23588186 5 127 13.0 12.5 12.8 0.4 135 chr2R 23588051 intron apt + chr2R 23588118 intron apt + chr2R 23588186 intron apt + chr2R_5_23585001 chr2R_23585001 RAL-307_125b 1547 chr2R 23588064 23588075 chr2R 23588174 23588203 6 125 9.5 12.0 10.8 0.5 139 chr2R 23588064 intron apt + chr2R 23588134 intron apt + chr2R 23588203 intron apt + chr2R_6_23585001 chr2R_23585001 RAL-307_125b 1548 chr2R 23606986 23607193 chr2R 23607117 23607336 64 131 2.5 1.5 2.0 21.3 350 chr2R 23606986 intron CG17664 - chr2R 23607161 intron CG17664 - chr2R 23607336 intron CG17664 - chr2R_64_23605001 chr2R_23605001 RAL-307_125b 1549 chr2R 23739698 23739725 chr2R 23739824 23739841 10 115 11.5 4.0 7.8 1.1 143 chr2R 23739698 intron egl - chr2R 23739770 intron egl - chr2R 23739841 intron egl - chr2R_10_23735001 chr2R_23735001 RAL-307_125b 1550 chr2R 23771274 23771309 chr2R 23771402 23771441 11 131 4.0 4.5 4.2 2.1 167 chr2R 23771274 intron CG9850 - chr2R 23771358 intron CG9850 - chr2R 23771441 intron CG9850 - chr2R_11_23770001 chr2R_23770001 RAL-307_125b 1551 chr2R 23784431 23784448 chr2R 23784559 23784571 9 125 26.0 13.0 19.5 0.4 140 chr2R 23784431 intron CG9850 - chr2R 23784501 intron CG9850 - chr2R 23784571 intron CG9850 - chr2R_9_23780001 chr2R_23780001 RAL-307_125b 1552 chr2R 23784451 23784503 chr2R 23784554 23784630 35 124 14.0 12.5 13.2 2.5 179 chr2R 23784451 intron CG9850 - chr2R 23784540 intron CG9850 - chr2R 23784630 intron CG9850 - chr2R_35_23780001 chr2R_23780001 RAL-307_125b 1553 chr2R 23819099 23819143 chr2R 23819244 23819282 17 144 13.5 6.5 10.0 1.5 183 chr2R 23819099 intergenic not near genes chr2R 23819190 intergenic not near genes chr2R 23819282 intergenic not near genes chr2R_17_23815001 chr2R_23815001 RAL-307_125b 1554 chr2R 23886682 23886718 chr2R 23886788 23886788 12 109 5.0 7.5 6.2 1.7 106 chr2R 23886682 intergenic CG5597 + chr2R 23886735 intergenic CG5597 + chr2R 23886788 intergenic CG5597 + chr2R_12_23885001 chr2R_23885001 RAL-307_125b 1555 chr2R 23914259 23914320 chr2R 23921928 23921973 412 23 7668 12.5 6.0 9.2 2.3 7714 chr2R 23914259 exon kcc + chr2R 23918116 intron kcc + chr2R 23921973 exon kcc + chr2R_23_23915001 chr2R_23915001 RAL-307_125b 1556 chr2R 24031335 24031414 chr2R 24031469 24031483 33 129 9.0 8.0 8.5 3.5 148 chr2R 24031335 5` UTR CG30172 - chr2R 24031409 5` UTR CG30172 - chr2R 24031483 intergenic Chi -,CG30172 - chr2R_33_24030001 chr2R_24030001 RAL-307_125b 1557 chr2R 24144034 24144092 chr2R 24144176 24144233 21 141 11.5 5.0 8.2 2.3 199 chr2R 24144034 intron Dat + chr2R 24144134 intron Dat + chr2R 24144233 intron Dat + chr2R_21_24140001 chr2R_24140001 RAL-307_125b 1558 chr2R 24147022 24147086 chr2R 24154650 24154666 412 18 7615 4.5 8.0 6.2 2.5 7644 chr2R 24147022 intron Dat + chr2R 24150844 intron Dat + chr2R 24154666 intron Dat + chr2R_18_24150001 chr2R_24150001 RAL-307_125b 1559 chr2R 24147089 24147097 chr2R 24154645 24154704 412 6 7607 2.0 8.0 5.0 1.0 7615 chr2R 24147089 intron Dat + chr2R 24150896 intron Dat + chr2R 24154704 intron Dat + chr2R_6_24150001 chr2R_24150001 RAL-307_125b 1560 chr2R 24177191 24177258 chr2R 24184726 24184792 412 34 7533 21.0 9.5 15.2 2.1 7601 chr2R 24177191 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184792 3` UTR Nop60B + chr2R_34_24180001 chr2R_24180001 RAL-307_125b 1561 chr2R 24228349 24228429 chr2R 24228480 24228503 19 106 9.0 6.0 7.5 2.2 154 chr2R 24228349 intron CG30419 - chr2R 24228426 intron CG30419 - chr2R 24228503 intron CG30419 - chr2R_19_24225001 chr2R_24225001 RAL-307_125b 1562 chr2R 24287087 24287152 chr2R 24287213 24287279 35 125 9.5 2.5 6.0 5.0 192 chr2R 24287087 intron nvy + chr2R 24287183 intron nvy + chr2R 24287279 intron nvy + chr2R_35_24285001 chr2R_24285001 RAL-307_125b 1563 chr2R 24292563 24292593 chr2R 24292695 24292738 9 141 9.5 8.0 8.8 0.9 175 chr2R 24292563 intergenic not near genes chr2R 24292650 intergenic not near genes chr2R 24292738 intergenic not near genes chr2R_9_24290001 chr2R_24290001 RAL-307_125b 1564 chr2R 24303493 24303537 chr2R 24303606 24303628 11 112 8.5 7.0 7.8 1.2 135 chr2R 24303493 intergenic not near genes chr2R 24303560 intergenic not near genes chr2R 24303628 intergenic not near genes chr2R_11_24300001 chr2R_24300001 RAL-307_125b 1565 chr2R 24349079 24349131 chr2R 24349186 24349246 21 112 9.5 11.5 10.5 1.8 167 chr2R 24349079 intron bs + chr2R 24349162 intron bs + chr2R 24349246 intron bs + chr2R_21_24345001 chr2R_24345001 RAL-307_125b 1566 chr2R 24352580 24352590 chr2R 24352698 24352718 9 123 14.5 13.0 13.8 0.6 138 chr2R 24352580 intron,intron bs +,CR44811 - chr2R 24352649 intron,intron bs +,CR44811 - chr2R 24352718 intron,intron bs +,CR44811 - chr2R_9_24350001 chr2R_24350001 RAL-307_125b 1567 chr2R 24352591 24352602 chr2R 24352687 24352714 5 114 7.0 11.0 9.0 0.5 123 chr2R 24352591 intron,intron bs +,CR44811 - chr2R 24352652 intron,intron bs +,CR44811 - chr2R 24352714 intron,intron bs +,CR44811 - chr2R_5_24350001 chr2R_24350001 RAL-307_125b 1568 chr2R 24353396 24353438 chr2R 24361792 24361805 roo 9 8399 18.0 11.0 14.5 0.6 8409 chr2R 24353396 intron,intron bs +,CR44811 - chr2R 24357600 intron,intron bs +,CR44811 - chr2R 24361805 intron,intron bs +,CR44811 - chr2R_9_24355001 chr2R_24355001 RAL-307_125b 1569 chr2R 24430888 24430944 chr2R 24431014 24431082 15 132 0.0 10.5 5.2 2.4 194 chr2R 24430888 intergenic CG15873 -,Pgam5-2 - chr2R 24430985 intergenic CG15873 -,Pgam5-2 - chr2R 24431082 intergenic Pgam5-2 -,CG15873 - chr2R_15_24430001 chr2R_24430001 RAL-307_125b 1570 chr2R 24483602 24483663 chr2R 24483727 24483758 15 116 10.0 1.0 5.5 2.3 156 chr2R 24483602 intron CG13579 + chr2R 24483680 intron CG13579 + chr2R 24483758 intron CG13579 + chr2R_15_24480001 chr2R_24480001 RAL-307_125b 1571 chr2R 24493037 24493086 chr2R 24493176 24493225 23 139 11.0 9.5 10.2 2.1 188 chr2R 24493037 intergenic CG13589 -,CG13590 - chr2R 24493131 intergenic CG13590 -,CG13589 - chr2R 24493225 intergenic CG13590 -,CG13589 - chr2R_23_24490001 chr2R_24490001 RAL-307_125b 1572 chr2R 24590101 24590141 chr2R 24590209 24590277 18 129 9.0 8.0 8.5 1.9 176 chr2R 24590101 intron pio + chr2R 24590189 intron pio + chr2R 24590277 intron pio + chr2R_18_24590001 chr2R_24590001 RAL-307_125b 1573 chr2R 24630673 24630754 chr2R 24630813 24630890 43 138 7.0 7.0 7.0 5.4 217 chr2R 24630673 intron CG13594 - chr2R 24630782 intron CG13594 - chr2R 24630890 intron CG13594 - chr2R_43_24630001 chr2R_24630001 RAL-307_125b 1574 chr2R 24647553 24647614 chr2R 24655160 24655220 412 18 7605 7.0 10.0 8.5 1.9 7667 chr2R 24647553 intergenic not near genes chr2R 24651386 intergenic not near genes chr2R 24655220 intergenic not near genes chr2R_18_24650001 chr2R_24650001 RAL-307_125b 1575 chr2R 24688915 24688991 chr2R 24689048 24689113 37 128 9.5 8.0 8.8 3.8 198 chr2R 24688915 intergenic not near genes chr2R 24689014 intergenic not near genes chr2R 24689113 intergenic not near genes chr2R_37_24685001 chr2R_24685001 RAL-307_125b 1576 chr2R 24719805 24719820 chr2R 24719937 24719971 7 147 2.5 11.5 7.0 0.9 166 chr2R 24719805 intron Mid1 - chr2R 24719888 intron Mid1 - chr2R 24719971 intron Mid1 - chr2R_7_24715001 chr2R_24715001 RAL-307_125b 1577 chr2R 24727863 24727872 chr2R 24735401 24735430 mdg1 4 7552 13.0 12.0 12.5 0.3 7567 chr2R 24727863 intron Mid1 - chr2R 24731646 intron Mid1 - chr2R 24735430 intron Mid1 - chr2R_4_24730001 chr2R_24730001 RAL-307_125b 1578 chr2R 24727882 24727914 chr2R 24735400 24735405 mdg1 20 7531 6.0 12.0 9.0 2.0 7523 chr2R 24727882 intron Mid1 - chr2R 24731644 intron Mid1 - chr2R 24735405 intron Mid1 - chr2R_20_24730001 chr2R_24730001 RAL-307_125b 1579 chr2R 24763594 24763641 chr2R 24765589 24765661 G2 18 2005 3.0 8.0 5.5 2.8 2067 chr2R 24763594 exon CG3894 + chr2R 24764628 intron CG3894 + chr2R 24765661 exon CG3894 + chr2R_18_24760001 chr2R_24760001 RAL-307_125b 1580 chr2R 24809778 24809857 chr2R 24809932 24810011 23 150 7.5 9.0 8.2 2.5 233 chr2R 24809778 3` UTR CG42851 + chr2R 24809894 3` UTR CG42851 + chr2R 24810011 3` UTR CG42851 + chr2R_23_24805001 chr2R_24805001 RAL-307_125b 1581 chr2R 24823794 24823800 chr2R 24823950 24823956 4 156 12.0 15.0 13.5 0.3 162 chr2R 24823794 intron Dll + chr2R 24823875 intron Dll + chr2R 24823956 intron Dll + chr2R_4_24820001 chr2R_24820001 RAL-307_125b 1582 chr2R 24823803 24823823 chr2R 24823927 24823979 9 147 6.5 11.0 8.8 0.9 176 chr2R 24823803 intron Dll + chr2R 24823891 intron Dll + chr2R 24823979 intron Dll + chr2R_9_24820001 chr2R_24820001 RAL-307_125b 1583 chr2R 24859792 24859826 chr2R 24859928 24859953 9 131 14.5 2.0 8.2 1.0 161 chr2R 24859792 5` UTR CR44829 + chr2R 24859872 5` UTR CR44829 + chr2R 24859953 5` UTR CR44829 + chr2R_9_24855001 chr2R_24855001 RAL-307_125b 1584 chr2R 24859827 24859867 chr2R 24859926 24859999 16 123 5.0 2.0 3.5 3.6 172 chr2R 24859827 5` UTR CR44829 + chr2R 24859913 5` UTR CR44829 + chr2R 24859999 5` UTR CR44829 + chr2R_16_24855001 chr2R_24855001 RAL-307_125b 1585 chr2R 24884006 24884078 chr2R 24884138 24884210 52 129 10.5 9.0 9.8 4.8 204 chr2R 24884006 intron NKAIN + chr2R 24884108 intron NKAIN + chr2R 24884210 intron NKAIN + chr2R_52_24880001 chr2R_24880001 RAL-307_125b 1586 chr2R 24983957 24984024 chr2R 24984120 24984172 37 159 10.0 14.0 12.0 2.8 215 chr2R 24983957 intron emp - chr2R 24984064 intron emp - chr2R 24984172 intron emp - chr2R_37_24980001 chr2R_24980001 RAL-307_125b 1587 chr2R 25016797 25016864 chr2R 25016932 25016989 23 129 6.5 6.0 6.2 3.2 192 chr2R 25016797 intron uzip + chr2R 25016893 intron uzip + chr2R 25016989 intron uzip + chr2R_23_25015001 chr2R_25015001 RAL-307_125b 1588 chr2R 25022594 25022672 chr2R 25022728 25022806 35 133 9.0 13.0 11.0 2.9 212 chr2R 25022594 intron uzip + chr2R 25022700 intron uzip + chr2R 25022806 intron uzip + chr2R_35_25020001 chr2R_25020001 RAL-307_125b 1589 chr2R 25061295 25061321 chr2R 25061428 25061439 12 128 22.5 9.0 15.8 0.7 144 chr2R 25061295 intergenic not near genes chr2R 25061367 intergenic not near genes chr2R 25061439 intergenic not near genes chr2R_12_25060001 chr2R_25060001 RAL-307_125b 1590 chr2R 25061322 25061365 chr2R 25061417 25061457 22 117 10.0 8.5 9.2 2.2 135 chr2R 25061322 intergenic not near genes chr2R 25061390 intergenic not near genes chr2R 25061457 intergenic not near genes chr2R_22_25060001 chr2R_25060001 RAL-307_125b 1591 chr2R 25076181 25076187 chr2R 25076470 25076476 4 289 35.5 25.5 30.5 0.1 295 chr2R 25076181 intron gol - chr2R 25076328 intron gol - chr2R 25076476 intron gol - chr2R_4_25075001 chr2R_25075001 RAL-307_125b 1592 chr2R 25076522 25076531 chr2R 25076652 25076661 10 131 22.0 37.0 29.5 0.3 139 chr2R 25076522 intron gol - chr2R 25076592 intron gol - chr2R 25076661 intron gol - chr2R_10_25075001 chr2R_25075001 RAL-307_125b 1593 chr2R 25081562 25081637 chr2R 25082708 25082757 20 1141 3.5 4.5 4.0 4.0 1195 chr2R 25081562 intron gol - chr2R 25082160 intron gol - chr2R 25082757 intron gol - chr2R_20_25080001 chr2R_25080001 RAL-307_125b 1594 chr2R 25101229 25101243 chr2R 25101381 25101395 10 151 24.5 8.5 16.5 0.6 166 chr2R 25101229 intron lov - chr2R 25101312 intron lov - chr2R 25101395 intron lov - chr2R_10_25100001 chr2R_25100001 RAL-307_125b 1595 chr2R 25101246 25101305 chr2R 25101377 25101436 28 147 9.5 7.0 8.2 3.0 190 chr2R 25101246 intron lov - chr2R 25101341 intron lov - chr2R 25101436 intron lov - chr2R_28_25100001 chr2R_25100001 RAL-307_125b 1596 chr2R 25141605 25141677 chr2R 25159345 25159417 roo 35 17739 9.5 14.5 12.0 2.7 17812 chr2R 25141605 intergenic not near genes chr2R 25150511 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_35_25150001 chr2R_25150001 RAL-307_125b 1597 chr2R 25234715 25234795 chr2R 25234845 25234925 36 129 8.5 10.0 9.2 3.5 210 chr2R 25234715 intron CG9380 - chr2R 25234820 intron CG9380 - chr2R 25234925 intron CG9380 - chr2R_36_25230001 chr2R_25230001 RAL-307_125b 1598 chr2R 25256587 25256596 chr2R 25257867 25257876 6 1280 22.5 4.0 13.2 0.4 1289 chr2R 25256587 intergenic not near genes chr2R 25257232 intergenic not near genes chr2R 25257876 intergenic not near genes chr2R_6_25255001 chr2R_25255001 RAL-307_125b 1599 chr3L 30782 30854 chr3L 30993 31048 37 205 9.0 11.0 10.0 3.4 266 chr3L 30782 intergenic not near genes chr3L 30915 intergenic not near genes chr3L 31048 intergenic not near genes chr3L_37_30001 chr3L_30001 RAL-307_125b 1600 chr3L 68940 68951 chr3L 69077 69088 8 135 19.5 8.5 14.0 0.5 148 chr3L 68940 3` UTR Lsp1gamma + chr3L 69014 intergenic Lsp1gamma +,CR44510 + chr3L 69088 intergenic CR44510 +,Lsp1gamma + chr3L_8_65001 chr3L_65001 RAL-307_125b 1601 chr3L 68952 69011 chr3L 69075 69136 35 129 4.0 8.0 6.0 5.0 184 chr3L 68952 3` UTR Lsp1gamma + chr3L 69044 intergenic Lsp1gamma +,CR44510 + chr3L 69136 intergenic CR44510 +,Lsp1gamma + chr3L_35_65001 chr3L_65001 RAL-307_125b 1602 chr3L 93748 93820 chr3L 93870 93923 12 118 9.0 6.5 7.8 1.4 175 chr3L 93748 intergenic not near genes chr3L 93836 intergenic not near genes chr3L 93923 intergenic not near genes chr3L_12_90001 chr3L_90001 RAL-307_125b 1603 chr3L 105950 106023 chr3L 106129 106202 41 177 10.5 13.5 12.0 3.2 252 chr3L 105950 intergenic not near genes chr3L 106076 intergenic not near genes chr3L 106202 intergenic not near genes chr3L_41_105001 chr3L_105001 RAL-307_125b 1604 chr3L 108560 108623 chr3L 108753 108816 29 192 7.5 12.5 10.0 2.6 256 chr3L 108560 intergenic not near genes chr3L 108688 intergenic not near genes chr3L 108816 intergenic not near genes chr3L_29_105001 chr3L_105001 RAL-307_125b 1605 chr3L 110170 110238 chr3L 119387 119455 roo 39 9215 8.0 12.5 10.2 3.5 9285 chr3L 110170 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119455 intergenic not near genes chr3L_39_110001 chr3L_110001 RAL-307_125b 1606 chr3L 343151 343168 chr3L 343324 343334 12 172 25.5 25.5 25.5 0.5 183 chr3L 343151 intron Ptpmeg + chr3L 343242 intron Ptpmeg + chr3L 343334 intron Ptpmeg + chr3L_12_340001 chr3L_340001 RAL-307_125b 1607 chr3L 343170 343174 chr3L 343320 343347 5 168 23.0 24.5 23.8 0.2 177 chr3L 343170 intron Ptpmeg + chr3L 343258 intron Ptpmeg + chr3L 343347 intron Ptpmeg + chr3L_5_340001 chr3L_340001 RAL-307_125b 1608 chr3L 402657 402715 chr3L 409748 409805 297 18 7099 5.0 9.0 7.0 2.2 7148 chr3L 402657 intergenic not near genes chr3L 406231 intergenic not near genes chr3L 409805 intergenic not near genes chr3L_18_405001 chr3L_405001 RAL-307_125b 1609 chr3L 456180 456188 chr3L 456308 456317 6 127 27.0 12.5 19.8 0.3 137 chr3L 456180 intron klar - chr3L 456248 intron klar - chr3L 456317 intron klar - chr3L_6_455001 chr3L_455001 RAL-307_125b 1610 chr3L 456212 456216 chr3L 456291 456345 8 120 16.5 8.0 12.2 0.6 133 chr3L 456212 intron klar - chr3L 456278 intron klar - chr3L 456345 intron klar - chr3L_8_455001 chr3L_455001 RAL-307_125b 1611 chr3L 456218 456238 chr3L 456287 456367 23 122 11.0 8.5 9.8 2.1 149 chr3L 456218 intron klar - chr3L 456292 intron klar - chr3L 456367 intron klar - chr3L_23_455001 chr3L_455001 RAL-307_125b 1612 chr3L 498467 498485 chr3L 498595 498613 7 128 14.0 9.5 11.8 0.5 146 chr3L 498467 intron klar - chr3L 498540 intron klar - chr3L 498613 intron klar - chr3L_7_495001 chr3L_495001 RAL-307_125b 1613 chr3L 498489 498513 chr3L 498592 498641 8 125 7.5 8.5 8.0 0.9 152 chr3L 498489 intron klar - chr3L 498565 intron klar - chr3L 498641 intron klar - chr3L_8_495001 chr3L_495001 RAL-307_125b 1614 chr3L 563931 563983 chr3L 564154 564210 35 226 10.5 13.5 12.0 2.7 279 chr3L 563931 intron hipk + chr3L 564070 intron hipk + chr3L 564210 intron hipk + chr3L_35_560001 chr3L_560001 RAL-307_125b 1615 chr3L 563984 563996 chr3L 564152 564225 4 210 8.0 12.5 10.2 0.4 241 chr3L 563984 intron hipk + chr3L 564104 intron hipk + chr3L 564225 intron hipk + chr3L_4_560001 chr3L_560001 RAL-307_125b 1616 chr3L 642435 642490 chr3L 642576 642631 23 140 8.0 12.0 10.0 2.1 196 chr3L 642435 5` UTR CR43334 + chr3L 642533 5` UTR CR43334 + chr3L 642631 5` UTR CR43334 + chr3L_23_640001 chr3L_640001 RAL-307_125b 1617 chr3L 651352 651413 chr3L 651481 651551 31 132 8.0 12.5 10.2 2.8 199 chr3L 651352 intergenic Gale +,CG3402 - chr3L 651452 intergenic CG3402 -,Gale + chr3L 651551 3` UTR CG3402 - chr3L_31_650001 chr3L_650001 RAL-307_125b 1618 chr3L 670027 670050 chr3L 670134 670157 5 110 5.5 8.5 7.0 0.6 130 chr3L 670027 intergenic not near genes chr3L 670092 intergenic not near genes chr3L 670157 intergenic not near genes chr3L_5_670001 chr3L_670001 RAL-307_125b 1619 chr3L 727977 727997 chr3L 728103 728123 11 126 13.0 15.5 14.2 0.7 146 chr3L 727977 intergenic not near genes chr3L 728050 intergenic not near genes chr3L 728123 intergenic not near genes chr3L_11_725001 chr3L_725001 RAL-307_125b 1620 chr3L 732781 732839 chr3L 733052 733109 21 270 6.5 12.5 9.5 2.0 328 chr3L 732781 intergenic not near genes chr3L 732945 intergenic not near genes chr3L 733109 intergenic not near genes chr3L_21_730001 chr3L_730001 RAL-307_125b 1621 chr3L 746456 746522 chr3L 746591 746642 30 132 10.0 15.0 12.5 2.2 186 chr3L 746456 intron hng3 - chr3L 746549 intron hng3 - chr3L 746642 intron hng3 - chr3L_30_745001 chr3L_745001 RAL-307_125b 1622 chr3L 789862 789943 chr3L 790397 790478 roo 34 534 8.5 6.0 7.2 4.1 616 chr3L 789862 intergenic not near genes chr3L 790170 intergenic not near genes chr3L 790478 intergenic not near genes chr3L_34_790001 chr3L_790001 RAL-307_125b 1623 chr3L 823991 824044 chr3L 824123 824171 16 128 4.5 1.0 2.8 4.2 180 chr3L 823991 intergenic not near genes chr3L 824081 intergenic not near genes chr3L 824171 intergenic not near genes chr3L_16_820001 chr3L_820001 RAL-307_125b 1624 chr3L 857973 857999 chr3L 866487 866518 Tirant 11 8516 13.0 11.0 12.0 0.8 8545 chr3L 857973 intergenic not near genes chr3L 862246 intergenic not near genes chr3L 866518 5` UTR CG12502 + chr3L_11_860001 chr3L_860001 RAL-307_125b 1625 chr3L 899994 900017 chr3L 900128 900150 10 134 1.5 24.0 12.8 0.7 156 chr3L 899994 intergenic not near genes chr3L 900072 intergenic not near genes chr3L 900150 intergenic not near genes chr3L_10_900001 chr3L_900001 RAL-307_125b 1626 chr3L 901418 901444 chr3L 901517 901553 12 110 9.0 14.5 11.8 0.9 135 chr3L 901418 intergenic not near genes chr3L 901486 intergenic not near genes chr3L 901553 intergenic not near genes chr3L_12_900001 chr3L_900001 RAL-307_125b 1627 chr3L 905023 905094 chr3L 905155 905228 13 134 0.5 3.0 1.8 4.6 205 chr3L 905023 intergenic not near genes chr3L 905126 intergenic not near genes chr3L 905228 intergenic not near genes chr3L_13_905001 chr3L_905001 RAL-307_125b 1628 chr3L 922127 922178 chr3L 922247 922301 19 125 9.0 8.5 8.8 1.9 174 chr3L 922127 intron Glut1 + chr3L 922214 intron Glut1 + chr3L 922301 intron Glut1 + chr3L_19_920001 chr3L_920001 RAL-307_125b 1629 chr3L 925141 925198 chr3L 932611 932674 mdg1 26 7472 10.0 10.5 10.2 2.3 7533 chr3L 925141 intron Glut1 + chr3L 928908 intron Glut1 + chr3L 932674 intron Glut1 + chr3L_26_925001 chr3L_925001 RAL-307_125b 1630 chr3L 933862 933941 chr3L 934016 934079 34 151 4.5 6.0 5.2 5.5 217 chr3L 933862 intron Glut1 + chr3L 933970 intron Glut1 + chr3L 934079 intron Glut1 + chr3L_34_930001 chr3L_930001 RAL-307_125b 1631 chr3L 939738 939790 chr3L 940909 940946 jockey 26 1170 8.5 15.5 12.0 2.0 1208 chr3L 939738 intron Glut1 + chr3L 940342 intron Glut1 + chr3L 940946 intron Glut1 + chr3L_26_940001 chr3L_940001 RAL-307_125b 1632 chr3L 954820 954887 chr3L 955141 955154 22 318 8.0 6.0 7.0 2.8 334 chr3L 954820 intron Glut1 + chr3L 954987 intron Glut1 + chr3L 955154 intron Glut1 + chr3L_22_955001 chr3L_955001 RAL-307_125b 1633 chr3L 958272 958343 chr3L 958406 958477 34 133 9.5 12.5 11.0 2.8 205 chr3L 958272 intron Glut1 + chr3L 958374 intron Glut1 + chr3L 958477 intron Glut1 + chr3L_34_955001 chr3L_955001 RAL-307_125b 1634 chr3L 960967 961041 chr3L 961110 961184 39 141 6.0 10.5 8.2 4.2 217 chr3L 960967 intron Glut1 + chr3L 961076 intron Glut1 + chr3L 961184 intron Glut1 + chr3L_39_960001 chr3L_960001 RAL-307_125b 1635 chr3L 1010954 1010976 chr3L 1011081 1011107 5 129 13.0 7.5 10.2 0.4 153 chr3L 1010954 intron trio - chr3L 1011030 intron trio - chr3L 1011107 intron trio - chr3L_5_1010001 chr3L_1010001 RAL-307_125b 1636 chr3L 1010977 1011026 chr3L 1011078 1011141 12 122 5.0 7.0 6.0 1.7 164 chr3L 1010977 intron trio - chr3L 1011059 intron trio - chr3L 1011141 intron trio - chr3L_12_1010001 chr3L_1010001 RAL-307_125b 1637 chr3L 1014991 1015053 chr3L 1015153 1015175 15 153 7.0 9.0 8.0 1.7 184 chr3L 1014991 intron trio - chr3L 1015083 intron trio - chr3L 1015175 intron trio - chr3L_15_1015001 chr3L_1015001 RAL-307_125b 1638 chr3L 1021790 1021812 chr3L 1021922 1021944 9 131 9.0 0.5 4.8 1.6 154 chr3L 1021790 intron trio - chr3L 1021867 intron trio - chr3L 1021944 intron trio - chr3L_9_1020001 chr3L_1020001 RAL-307_125b 1639 chr3L 1031540 1031569 chr3L 1031666 1031679 5 123 10.5 11.0 10.8 0.4 139 chr3L 1031540 intron trio - chr3L 1031610 intron trio - chr3L 1031679 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-307_125b 1640 chr3L 1031571 1031611 chr3L 1031651 1031702 18 107 7.0 8.5 7.8 2.0 131 chr3L 1031571 intron trio - chr3L 1031636 intron trio - chr3L 1031702 intron trio - chr3L_18_1030001 chr3L_1030001 RAL-307_125b 1641 chr3L 1040500 1040581 chr3L 1040634 1040709 24 133 7.0 8.5 7.8 2.7 209 chr3L 1040500 intron bab1 - chr3L 1040604 intron bab1 - chr3L 1040709 intron bab1 - chr3L_24_1040001 chr3L_1040001 RAL-307_125b 1642 chr3L 1047313 1047325 chr3L 1055170 1055187 412 4 7858 13.0 7.5 10.2 0.4 7874 chr3L 1047313 intron bab1 - chr3L 1051250 intron bab1 - chr3L 1055187 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-307_125b 1643 chr3L 1047326 1047380 chr3L 1055167 1055236 412 10 7842 7.5 7.5 7.5 1.2 7910 chr3L 1047326 intron bab1 - chr3L 1051281 intron bab1 - chr3L 1055236 intron bab1 - chr3L_10_1050001 chr3L_1050001 RAL-307_125b 1644 chr3L 1109584 1109658 chr3L 1109722 1109796 33 135 9.5 10.5 10.0 3.0 212 chr3L 1109584 intergenic not near genes chr3L 1109690 intergenic not near genes chr3L 1109796 intergenic not near genes chr3L_33_1105001 chr3L_1105001 RAL-307_125b 1645 chr3L 1112193 1112270 chr3L 1112342 1112414 19 143 4.0 8.5 6.2 2.6 221 chr3L 1112193 intergenic not near genes chr3L 1112304 intergenic not near genes chr3L 1112414 intergenic not near genes chr3L_19_1110001 chr3L_1110001 RAL-307_125b 1646 chr3L 1145190 1145242 chr3L 1145319 1145371 22 128 8.0 0.5 4.2 4.2 181 chr3L 1145190 intron bab2 - chr3L 1145280 intron bab2 - chr3L 1145371 intron bab2 - chr3L_22_1145001 chr3L_1145001 RAL-307_125b 1647 chr3L 1154078 1154158 chr3L 1163281 1163358 roo 43 9198 14.5 9.0 11.8 3.4 9280 chr3L 1154078 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163358 intron bab2 - chr3L_43_1155001 chr3L_1155001 RAL-307_125b 1648 chr3L 1166030 1166056 chr3L 1166265 1166288 7 230 5.0 13.0 9.0 0.7 258 chr3L 1166030 intron bab2 - chr3L 1166159 intron bab2 - chr3L 1166288 intron bab2 - chr3L_7_1165001 chr3L_1165001 RAL-307_125b 1649 chr3L 1167624 1167706 chr3L 1167756 1167758 21 118 13.0 8.0 10.5 1.8 134 chr3L 1167624 intron bab2 - chr3L 1167691 intron bab2 - chr3L 1167758 intron bab2 - chr3L_21_1165001 chr3L_1165001 RAL-307_125b 1650 chr3L 1219550 1219613 chr3L 1227333 1227396 412 20 7776 5.0 10.0 7.5 2.4 7846 chr3L 1219550 intron mwh + chr3L 1223473 intron mwh + chr3L 1227396 intron mwh + chr3L_20_1220001 chr3L_1220001 RAL-307_125b 1651 chr3L 1251770 1251843 chr3L 1251904 1251974 13 132 0.5 0.5 0.5 8.7 204 chr3L 1251770 3` UTR CG9129 + chr3L 1251872 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251974 intergenic CG9130 +,CG9133 +,CG9129 + chr3L_13_1250001 chr3L_1250001 RAL-307_125b 1652 chr3L 1260103 1260162 chr3L 1260233 1260292 27 129 9.5 17.5 13.5 1.9 189 chr3L 1260103 intron CG9134 + chr3L 1260198 intron CG9134 + chr3L 1260292 intron CG9134 + chr3L_27_1260001 chr3L_1260001 RAL-307_125b 1653 chr3L 1289974 1290046 chr3L 1290130 1290191 28 151 12.0 9.0 10.5 2.4 217 chr3L 1289974 intron CG32333 + chr3L 1290082 intron CG32333 + chr3L 1290191 intron CG32333 + chr3L_28_1290001 chr3L_1290001 RAL-307_125b 1654 chr3L 1378899 1378910 chr3L 1379026 1379036 4 127 14.0 0.0 7.0 0.5 137 chr3L 1378899 intron,intron Ptp61F -,ru + chr3L 1378968 intron,intron Ptp61F -,ru + chr3L 1379036 intron,intron Ptp61F -,ru + chr3L_4_1375001 chr3L_1375001 RAL-307_125b 1655 chr3L 1378919 1378962 chr3L 1379019 1379089 5 105 6.5 1.5 4.0 1.0 170 chr3L 1378919 intron,intron Ptp61F -,ru + chr3L 1379004 intron,intron Ptp61F -,ru + chr3L 1379089 intron,intron Ptp61F -,ru + chr3L_5_1375001 chr3L_1375001 RAL-307_125b 1656 chr3L 1396706 1396717 chr3L 1396836 1396847 5 130 18.5 19.0 18.8 0.3 141 chr3L 1396706 intron Ptp61F - chr3L 1396776 intron Ptp61F - chr3L 1396847 intron Ptp61F - chr3L_5_1395001 chr3L_1395001 RAL-307_125b 1657 chr3L 1396721 1396754 chr3L 1396822 1396883 11 126 14.0 15.5 14.8 0.7 162 chr3L 1396721 intron Ptp61F - chr3L 1396802 intron Ptp61F - chr3L 1396883 intron Ptp61F - chr3L_11_1395001 chr3L_1395001 RAL-307_125b 1658 chr3L 1424763 1424772 chr3L 1430022 1430055 Rt1a 9 5276 0.5 7.5 4.0 1.8 5292 chr3L 1424763 intron Ptp61F - chr3L 1427409 intron Ptp61F - chr3L 1430055 intron Ptp61F - chr3L_9_1425001 chr3L_1425001 RAL-307_125b 1659 chr3L 1485693 1485737 chr3L 1486908 1486936 1360 13 1214 8.0 14.5 11.2 1.1 1243 chr3L 1485693 intron stet - chr3L 1486314 intron stet - chr3L 1486936 intron stet - chr3L_13_1485001 chr3L_1485001 RAL-307_125b 1660 chr3L 1505960 1505963 chr3L 1513607 1513610 17.6 6 7647 27.0 12.0 19.5 0.3 7650 chr3L 1505960 intron,intron Psa +,cue - chr3L 1509785 intron,intron Psa +,cue - chr3L 1513610 intron,intron Psa +,cue - chr3L_6_1505001 chr3L_1505001 RAL-307_125b 1661 chr3L 1505968 1506028 chr3L 1513605 1513658 17.6 21 7644 16.5 11.0 13.8 1.4 7690 chr3L 1505968 intron,intron Psa +,cue - chr3L 1509813 intron,intron Psa +,cue - chr3L 1513658 intron,intron Psa +,cue - chr3L_21_1505001 chr3L_1505001 RAL-307_125b 1662 chr3L 1571244 1571490 chr3L 1571330 1571626 46 131 4.5 10.5 7.5 5.4 382 chr3L 1571244 intron CG12004 + chr3L 1571435 intron CG12004 + chr3L 1571626 intron CG12004 + chr3L_46_1570001 chr3L_1570001 RAL-307_125b 1663 chr3L 1585884 1585935 chr3L 1586016 1586067 23 132 7.5 0.5 4.0 4.6 183 chr3L 1585884 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586067 intron CG13917 + chr3L_23_1585001 chr3L_1585001 RAL-307_125b 1664 chr3L 1632865 1632906 chr3L 1632985 1632991 20 115 10.5 16.5 13.5 1.4 126 chr3L 1632865 intron nSyb - chr3L 1632928 intron nSyb - chr3L 1632991 intron nSyb - chr3L_20_1630001 chr3L_1630001 RAL-307_125b 1665 chr3L 1740814 1740879 chr3L 1741107 1741171 pogo 33 288 14.5 17.0 15.8 2.0 357 chr3L 1740814 intron Gk + chr3L 1740992 intron Gk + chr3L 1741171 intron Gk + chr3L_33_1740001 chr3L_1740001 RAL-307_125b 1666 chr3L 1805656 1805709 chr3L 1805880 1805928 22 224 8.5 13.5 11.0 1.8 272 chr3L 1805656 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805928 intron CG42676 + chr3L_22_1805001 chr3L_1805001 RAL-307_125b 1667 chr3L 1817052 1817111 chr3L 1817181 1817240 12 127 6.0 8.0 7.0 1.5 188 chr3L 1817052 intron GV1 + chr3L 1817146 intron GV1 + chr3L 1817240 intron GV1 + chr3L_12_1815001 chr3L_1815001 RAL-307_125b 1668 chr3L 1821590 1821650 chr3L 1821722 1821782 27 131 7.5 5.5 6.5 3.6 192 chr3L 1821590 intron GV1 + chr3L 1821686 intron GV1 + chr3L 1821782 intron GV1 + chr3L_27_1820001 chr3L_1820001 RAL-307_125b 1669 chr3L 1848596 1848668 chr3L 1848724 1848796 31 124 6.5 6.5 6.5 4.1 200 chr3L 1848596 intergenic not near genes chr3L 1848696 intergenic not near genes chr3L 1848796 intergenic not near genes chr3L_31_1845001 chr3L_1845001 RAL-307_125b 1670 chr3L 1852995 1853053 chr3L 1853129 1853179 27 134 8.5 9.0 8.8 2.8 184 chr3L 1852995 intron CG13936 - chr3L 1853087 intron CG13936 - chr3L 1853179 intron CG13936 - chr3L_27_1850001 chr3L_1850001 RAL-307_125b 1671 chr3L 1905331 1905375 chr3L 1905475 1905519 15 144 7.0 12.5 9.8 1.4 188 chr3L 1905331 intron CG1887 - chr3L 1905425 intron CG1887 - chr3L 1905519 intron CG1887 - chr3L_15_1905001 chr3L_1905001 RAL-307_125b 1672 chr3L 1922426 1922450 chr3L 1922539 1922578 11 113 13.5 8.0 10.8 0.9 152 chr3L 1922426 intron Dbx + chr3L 1922502 intron Dbx + chr3L 1922578 intron Dbx + chr3L_11_1920001 chr3L_1920001 RAL-307_125b 1673 chr3L 1922960 1923035 chr3L 1923099 1923146 36 134 6.0 10.5 8.2 3.9 186 chr3L 1922960 intron Dbx + chr3L 1923053 intron Dbx + chr3L 1923146 intron Dbx + chr3L_36_1920001 chr3L_1920001 RAL-307_125b 1674 chr3L 1924916 1924973 chr3L 1925102 1925151 14 182 3.5 8.0 5.8 2.1 235 chr3L 1924916 exon Dbx + chr3L 1925034 intron Dbx + chr3L 1925151 intron Dbx + chr3L_14_1925001 chr3L_1925001 RAL-307_125b 1675 chr3L 1988814 1988868 chr3L 1989043 1989097 8 226 3.0 7.5 5.2 1.3 283 chr3L 1988814 intergenic not near genes chr3L 1988956 intergenic not near genes chr3L 1989097 intergenic not near genes chr3L_8_1985001 chr3L_1985001 RAL-307_125b 1676 chr3L 1991069 1991128 chr3L 1991198 1991255 22 128 12.5 7.5 10.0 2.0 186 chr3L 1991069 intergenic not near genes chr3L 1991162 intergenic not near genes chr3L 1991255 intergenic not near genes chr3L_22_1990001 chr3L_1990001 RAL-307_125b 1677 chr3L 2035219 2035242 chr3L 2035345 2035353 11 125 23.5 2.5 13.0 0.8 134 chr3L 2035219 intergenic not near genes chr3L 2035286 intergenic not near genes chr3L 2035353 intergenic not near genes chr3L_11_2035001 chr3L_2035001 RAL-307_125b 1678 chr3L 2035260 2035300 chr3L 2035340 2035431 19 122 10.0 3.0 6.5 2.5 171 chr3L 2035260 intergenic not near genes chr3L 2035346 intergenic not near genes chr3L 2035431 intergenic not near genes chr3L_19_2035001 chr3L_2035001 RAL-307_125b 1679 chr3L 2108086 2108104 chr3L 2108221 2108239 6 135 0.0 0.0 0.0 6.0 153 chr3L 2108086 intron sls - chr3L 2108162 intron sls - chr3L 2108239 intron sls - chr3L_6_2105001 chr3L_2105001 RAL-307_125b 1680 chr3L 2108200 2108280 chr3L 2113454 2113534 copia 18 5254 0.0 8.5 4.2 3.5 5334 chr3L 2108200 intron sls - chr3L 2110867 intron sls - chr3L 2113534 intron sls - chr3L_18_2110001 chr3L_2110001 RAL-307_125b 1681 chr3L 2139159 2139234 chr3L 2139290 2139358 22 129 10.0 4.5 7.2 2.7 199 chr3L 2139159 intron zormin - chr3L 2139258 intron zormin - chr3L 2139358 intron zormin - chr3L_22_2135001 chr3L_2135001 RAL-307_125b 1682 chr3L 2199785 2199796 chr3L 2199902 2199922 4 124 16.0 13.0 14.5 0.3 137 chr3L 2199785 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199922 intergenic not near genes chr3L_4_2195001 chr3L_2195001 RAL-307_125b 1683 chr3L 2199799 2199820 chr3L 2199890 2199946 16 121 8.5 10.0 9.2 1.6 147 chr3L 2199799 intergenic not near genes chr3L 2199872 intergenic not near genes chr3L 2199946 intergenic not near genes chr3L_16_2195001 chr3L_2195001 RAL-307_125b 1684 chr3L 2218437 2218505 chr3L 2218563 2218630 9 119 10.5 11.5 11.0 0.8 193 chr3L 2218437 intergenic not near genes chr3L 2218534 intergenic not near genes chr3L 2218630 intergenic not near genes chr3L_9_2215001 chr3L_2215001 RAL-307_125b 1685 chr3L 2278987 2279067 chr3L 2279188 2279264 35 195 1.0 5.0 3.0 8.8 277 chr3L 2278987 intergenic not near genes chr3L 2279126 intergenic not near genes chr3L 2279264 intergenic not near genes chr3L_35_2275001 chr3L_2275001 RAL-307_125b 1686 chr3L 2293802 2293869 chr3L 2293930 2293997 17 127 5.5 4.5 5.0 2.8 195 chr3L 2293802 intron MsR2 + chr3L 2293900 intron MsR2 + chr3L 2293997 intron MsR2 + chr3L_17_2290001 chr3L_2290001 RAL-307_125b 1687 chr3L 2307978 2308009 chr3L 2308114 2308157 18 152 12.5 8.5 10.5 1.6 179 chr3L 2307978 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308157 intergenic not near genes chr3L_18_2305001 chr3L_2305001 RAL-307_125b 1688 chr3L 2308010 2308026 chr3L 2308113 2308182 8 146 10.0 8.5 9.2 0.8 172 chr3L 2308010 intergenic not near genes chr3L 2308096 intergenic not near genes chr3L 2308182 intergenic not near genes chr3L_8_2305001 chr3L_2305001 RAL-307_125b 1689 chr3L 2317808 2317875 chr3L 2317943 2318010 24 127 11.5 5.0 8.2 2.6 202 chr3L 2317808 intergenic CR45427 - chr3L 2317909 intergenic CR45427 - chr3L 2318010 intergenic CR45427 - chr3L_24_2315001 chr3L_2315001 RAL-307_125b 1690 chr3L 2321124 2321184 chr3L 2321245 2321311 17 123 9.5 7.0 8.2 1.8 187 chr3L 2321124 intergenic not near genes chr3L 2321218 intergenic not near genes chr3L 2321311 intergenic not near genes chr3L_17_2320001 chr3L_2320001 RAL-307_125b 1691 chr3L 2332941 2333008 chr3L 2333253 2333308 23 310 8.5 9.5 9.0 2.3 367 chr3L 2332941 intron MsR1 + chr3L 2333124 intron MsR1 + chr3L 2333308 intron MsR1 + chr3L_23_2330001 chr3L_2330001 RAL-307_125b 1692 chr3L 2411298 2411334 chr3L 2411427 2411464 9 128 6.5 8.0 7.2 1.1 166 chr3L 2411298 intron CG45186 + chr3L 2411381 intron CG45186 + chr3L 2411464 intron CG45186 + chr3L_9_2410001 chr3L_2410001 RAL-307_125b 1693 chr3L 2416973 2417040 chr3L 2417116 2417183 27 143 11.0 16.0 13.5 1.9 210 chr3L 2416973 intron CG45186 + chr3L 2417078 intron CG45186 + chr3L 2417183 intron CG45186 + chr3L_27_2415001 chr3L_2415001 RAL-307_125b 1694 chr3L 2447465 2447478 chr3L 2456669 2456684 roo 10 9204 24.0 10.0 17.0 0.6 9219 chr3L 2447465 intron CG45186 + chr3L 2452074 intron CG45186 + chr3L 2456684 intron CG45186 + chr3L_10_2450001 chr3L_2450001 RAL-307_125b 1695 chr3L 2447479 2447528 chr3L 2456668 2456714 roo 24 9197 11.5 9.5 10.5 2.1 9235 chr3L 2447479 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456714 intron CG45186 + chr3L_24_2450001 chr3L_2450001 RAL-307_125b 1696 chr3L 2467405 2467485 chr3L 2467552 2467641 15 152 6.0 0.0 3.0 3.8 236 chr3L 2467405 intron CG45186 + chr3L 2467523 intron CG45186 + chr3L 2467641 intron CG45186 + chr3L_15_2465001 chr3L_2465001 RAL-307_125b 1697 chr3L 2483117 2483162 chr3L 2483230 2483233 8 117 3.0 4.0 3.5 1.8 116 chr3L 2483117 intron CG45186 + chr3L 2483175 intron CG45186 + chr3L 2483233 intron CG45186 + chr3L_8_2480001 chr3L_2480001 RAL-307_125b 1698 chr3L 2515360 2515425 chr3L 2515494 2515537 27 131 3.0 14.0 8.5 2.8 177 chr3L 2515360 intron Spn - chr3L 2515448 intron Spn - chr3L 2515537 intron Spn - chr3L_27_2515001 chr3L_2515001 RAL-307_125b 1699 chr3L 2533637 2533684 chr3L 2533744 2533756 11 112 4.5 14.0 9.2 1.1 119 chr3L 2533637 intron Spn - chr3L 2533696 intron Spn - chr3L 2533756 intron Spn - chr3L_11_2530001 chr3L_2530001 RAL-307_125b 1700 chr3L 2546711 2546794 chr3L 2546850 2546933 12 137 9.5 2.5 6.0 1.7 222 chr3L 2546711 intron Spn - chr3L 2546822 intron Spn - chr3L 2546933 intron Spn - chr3L_12_2545001 chr3L_2545001 RAL-307_125b 1701 chr3L 2683929 2683973 chr3L 2684045 2684099 5 122 14.0 15.0 14.5 0.3 170 chr3L 2683929 intron Fife - chr3L 2684014 intron Fife - chr3L 2684099 intron Fife - chr3L_5_2680001 chr3L_2680001 RAL-307_125b 1702 chr3L 2692117 2692169 chr3L 2692245 2692287 20 126 12.5 6.5 9.5 1.9 170 chr3L 2692117 intron Fife - chr3L 2692202 intron Fife - chr3L 2692287 intron Fife - chr3L_20_2690001 chr3L_2690001 RAL-307_125b 1703 chr3L 2692170 2692188 chr3L 2692238 2692307 12 113 12.0 8.0 10.0 1.1 137 chr3L 2692170 intron Fife - chr3L 2692238 intron Fife - chr3L 2692307 intron Fife - chr3L_12_2690001 chr3L_2690001 RAL-307_125b 1704 chr3L 2719500 2719509 chr3L 2719652 2719661 5 152 26.5 10.0 18.2 0.3 161 chr3L 2719500 3` UTR Mrtf - chr3L 2719580 3` UTR Mrtf - chr3L 2719661 3` UTR Mrtf - chr3L_5_2715001 chr3L_2715001 RAL-307_125b 1705 chr3L 2719514 2719560 chr3L 2719650 2719712 20 150 14.0 10.0 12.0 1.5 198 chr3L 2719514 3` UTR Mrtf - chr3L 2719613 3` UTR Mrtf - chr3L 2719712 3` UTR Mrtf - chr3L_20_2715001 chr3L_2715001 RAL-307_125b 1706 chr3L 2724125 2724138 chr3L 2724260 2724273 6 135 4.5 13.0 8.8 0.6 148 chr3L 2724125 intron Mrtf - chr3L 2724199 intron Mrtf - chr3L 2724273 intron Mrtf - chr3L_6_2720001 chr3L_2720001 RAL-307_125b 1707 chr3L 2751414 2751457 chr3L 2755759 2755802 F-element 17 4345 12.5 19.5 16.0 1.0 4388 chr3L 2751414 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755802 intron Mrtf - chr3L_17_2750001 chr3L_2750001 RAL-307_125b 1708 chr3L 2795673 2795745 chr3L 2795847 2795894 22 169 10.5 6.5 8.5 2.3 221 chr3L 2795673 intron CG43444 - chr3L 2795784 intron CG43444 - chr3L 2795894 intron CG43444 - chr3L_22_2795001 chr3L_2795001 RAL-307_125b 1709 chr3L 2835840 2835849 chr3L 2835970 2835972 4 128 12.0 10.0 11.0 0.3 132 chr3L 2835840 intron CG43444 - chr3L 2835906 intron CG43444 - chr3L 2835972 intron CG43444 - chr3L_4_2835001 chr3L_2835001 RAL-307_125b 1710 chr3L 2850124 2850181 chr3L 2850251 2850328 14 144 9.0 8.5 8.8 1.4 204 chr3L 2850124 intron CG43444 - chr3L 2850226 intron CG43444 - chr3L 2850328 intron CG43444 - chr3L_14_2850001 chr3L_2850001 RAL-307_125b 1711 chr3L 2854455 2854617 chr3L 2854583 2854703 6 109 10.5 19.5 15.0 0.4 248 chr3L 2854455 intron CG43444 - chr3L 2854579 intron CG43444 - chr3L 2854703 intron CG43444 - chr3L_6_2850001 chr3L_2850001 RAL-307_125b 1712 chr3L 2897358 2897424 chr3L 2897514 2897580 30 156 10.5 8.0 9.2 2.9 222 chr3L 2897358 5` UTR Shab + chr3L 2897469 intron Shab + chr3L 2897580 intron Shab + chr3L_30_2895001 chr3L_2895001 RAL-307_125b 1713 chr3L 2906189 2906239 chr3L 2906324 2906374 24 134 9.0 16.0 12.5 1.8 185 chr3L 2906189 intron Shab + chr3L 2906282 intron Shab + chr3L 2906374 intron Shab + chr3L_24_2905001 chr3L_2905001 RAL-307_125b 1714 chr3L 2927796 2927798 chr3L 2936123 2936125 Tirant 4 8327 28.5 12.0 20.2 0.2 8329 chr3L 2927796 intron Shab + chr3L 2931960 intron Shab + chr3L 2936125 intron Shab + chr3L_4_2930001 chr3L_2930001 RAL-307_125b 1715 chr3L 2927800 2927866 chr3L 2936122 2936128 Tirant 51 8323 7.0 12.0 9.5 4.9 8328 chr3L 2927800 intron Shab + chr3L 2931964 intron Shab + chr3L 2936128 intron Shab + chr3L_51_2930001 chr3L_2930001 RAL-307_125b 1716 chr3L 2966686 2966722 chr3L 2974159 2974197 mdg1 16 7475 9.5 9.0 9.2 1.6 7511 chr3L 2966686 intergenic not near genes chr3L 2970442 intergenic not near genes chr3L 2974197 intergenic not near genes chr3L_16_2970001 chr3L_2970001 RAL-307_125b 1717 chr3L 2977272 2977298 chr3L 2977414 2977431 4 134 3.5 5.0 4.2 0.8 159 chr3L 2977272 intergenic not near genes chr3L 2977352 intergenic not near genes chr3L 2977431 intergenic not near genes chr3L_4_2975001 chr3L_2975001 RAL-307_125b 1718 chr3L 2980034 2980067 chr3L 2982783 2982836 15 2757 52.5 34.0 43.2 0.3 2802 chr3L 2980034 intergenic not near genes chr3L 2981435 exon CG2107 + chr3L 2982836 exon CG2107 + chr3L_15_2980001 chr3L_2980001 RAL-307_125b 1719 chr3L 3027560 3027577 chr3L 3028611 3028628 7 1048 18.5 11.5 15.0 0.4 1068 chr3L 3027560 intergenic not near genes chr3L 3028094 intergenic not near genes chr3L 3028628 intergenic not near genes chr3L_7_3025001 chr3L_3025001 RAL-307_125b 1720 chr3L 3027581 3027632 chr3L 3028606 3028683 26 1048 7.0 11.0 9.0 2.6 1102 chr3L 3027581 intergenic not near genes chr3L 3028132 intergenic not near genes chr3L 3028683 intergenic not near genes chr3L_26_3025001 chr3L_3025001 RAL-307_125b 1721 chr3L 3028957 3029020 chr3L 3029093 3029156 12 137 10.5 2.5 6.5 1.6 199 chr3L 3028957 intergenic not near genes chr3L 3029056 intergenic not near genes chr3L 3029156 intergenic not near genes chr3L_12_3025001 chr3L_3025001 RAL-307_125b 1722 chr3L 3031526 3031594 chr3L 3031665 3031732 9 138 10.0 0.5 5.2 1.5 206 chr3L 3031526 intergenic not near genes chr3L 3031629 intergenic not near genes chr3L 3031732 intergenic not near genes chr3L_9_3030001 chr3L_3030001 RAL-307_125b 1723 chr3L 3040279 3040356 chr3L 3042118 3042199 S-element 14 1839 11.5 0.0 5.8 2.1 1920 chr3L 3040279 3` UTR CG2162 + chr3L 3041239 intergenic not near genes chr3L 3042199 intergenic Jafrac2 + chr3L_14_3040001 chr3L_3040001 RAL-307_125b 1724 chr3L 3051696 3051755 chr3L 3051988 3052049 pogo 15 290 15.0 12.0 13.5 1.0 353 chr3L 3051696 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052049 intergenic CG32485 +,CG1271 + chr3L_15_3050001 chr3L_3050001 RAL-307_125b 1725 chr3L 3061256 3061317 chr3L 3069870 3069877 Tirant 13 8614 8.5 5.5 7.0 1.6 8621 chr3L 3061256 intron CG32486 - chr3L 3065566 intron CG32486 - chr3L 3069877 intron CG32486 - chr3L_13_3065001 chr3L_3065001 RAL-307_125b 1726 chr3L 3140777 3140855 chr3L 3141360 3141438 38 581 2.5 5.0 3.8 7.9 661 chr3L 3140777 intron CG11537 - chr3L 3141108 intron CG11537 - chr3L 3141438 intron CG11537 - chr3L_38_3140001 chr3L_3140001 RAL-307_125b 1727 chr3L 3269057 3269126 chr3L 3269198 3269228 21 138 2.0 11.5 6.8 2.7 171 chr3L 3269057 intergenic CG34265 + chr3L 3269142 intergenic CG34265 + chr3L 3269228 intergenic CG34265 + chr3L_21_3265001 chr3L_3265001 RAL-307_125b 1728 chr3L 3281394 3281468 chr3L 3281939 3282013 Doc 20 535 4.0 9.0 6.5 2.7 619 chr3L 3281394 intron CG12017 + chr3L 3281704 intron CG12017 + chr3L 3282013 intron CG12017 + chr3L_20_3280001 chr3L_3280001 RAL-307_125b 1729 chr3L 3284400 3284467 chr3L 3284534 3284572 16 123 7.5 7.0 7.2 2.0 172 chr3L 3284400 intron CG12017 + chr3L 3284486 intron CG12017 + chr3L 3284572 intron CG12017 + chr3L_16_3280001 chr3L_3280001 RAL-307_125b 1730 chr3L 3306470 3306544 chr3L 3306608 3306682 40 136 11.0 8.5 9.8 3.7 212 chr3L 3306470 intron ZnT63C + chr3L 3306576 intron ZnT63C + chr3L 3306682 intron ZnT63C + chr3L_40_3305001 chr3L_3305001 RAL-307_125b 1731 chr3L 3314091 3314162 chr3L 3314275 3314288 51 178 25.0 10.5 17.8 2.7 197 chr3L 3314091 intergenic ZnT63C +,Drsl2 + chr3L 3314190 intergenic Drsl2 +,ZnT63C + chr3L 3314288 intergenic Drsl2 +,ZnT63C + chr3L_51_3310001 chr3L_3310001 RAL-307_125b 1732 chr3L 3312269 3312285 chr3L 3315506 3315528 8 3234 35.5 74.5 55.0 0.1 3259 chr3L 3312269 exon ZnT63C + chr3L 3313898 3` UTR ZnT63C + chr3L 3315528 intergenic Drsl4 +,Drsl3 + chr3L_8_3310001 chr3L_3310001 RAL-307_125b 1733 chr3L 3312268 3312302 chr3L 3315539 3315581 8 3256 37.0 62.0 49.5 0.2 3313 chr3L 3312268 exon ZnT63C + chr3L 3313924 3` UTR ZnT63C + chr3L 3315581 intergenic Drsl4 +,Drsl3 + chr3L_8_3310001 chr3L_3310001 RAL-307_125b 1734 chr3L 3315933 3316004 chr3L 3316084 3316154 22 147 6.0 10.0 8.0 2.4 221 chr3L 3315933 3` UTR Drsl4 + chr3L 3316044 intergenic Drsl4 + chr3L 3316154 intergenic Drsl4 + chr3L_22_3315001 chr3L_3315001 RAL-307_125b 1735 chr3L 3449216 3449231 chr3L 3449344 3449359 9 128 12.5 6.0 9.2 0.9 143 chr3L 3449216 intron eIF5B - chr3L 3449288 intron eIF5B - chr3L 3449359 intron eIF5B - chr3L_9_3445001 chr3L_3445001 RAL-307_125b 1736 chr3L 3470123 3470182 chr3L 3470249 3470308 22 126 5.0 14.0 9.5 2.1 185 chr3L 3470123 intron CG14971 - chr3L 3470216 intron CG14971 - chr3L 3470308 intron CG14971 - chr3L_22_3470001 chr3L_3470001 RAL-307_125b 1737 chr3L 3475039 3475046 chr3L 3475534 3475536 jockey 4 494 24.5 9.0 16.8 0.2 497 chr3L 3475039 intron CG42324 + chr3L 3475288 intron CG42324 + chr3L 3475536 intron CG42324 + chr3L_4_3475001 chr3L_3475001 RAL-307_125b 1738 chr3L 3475048 3475111 chr3L 3475533 3475544 jockey 5 471 4.0 9.0 6.5 0.7 496 chr3L 3475048 intron CG42324 + chr3L 3475296 intron CG42324 + chr3L 3475544 intron CG42324 + chr3L_5_3475001 chr3L_3475001 RAL-307_125b 1739 chr3L 3484372 3484386 chr3L 3484498 3484513 11 126 15.5 7.5 11.5 0.9 141 chr3L 3484372 intron,exon CG42324 +,CG43074 - chr3L 3484442 intron,intron CG42324 +,CG43074 - chr3L 3484513 intron,intron CG42324 +,CG43074 - chr3L_11_3480001 chr3L_3480001 RAL-307_125b 1740 chr3L 3484389 3484442 chr3L 3484495 3484569 26 124 5.5 7.5 6.5 3.5 180 chr3L 3484389 intron,intron CG42324 +,CG43074 - chr3L 3484479 intron,exon CG42324 +,CG43074 - chr3L 3484569 intron,exon CG42324 +,CG43074 - chr3L_26_3480001 chr3L_3480001 RAL-307_125b 1741 chr3L 3512321 3512346 chr3L 3512450 3512476 16 128 4.0 8.0 6.0 2.3 155 chr3L 3512321 exon ImpE2 - chr3L 3512398 exon ImpE2 - chr3L 3512476 exon ImpE2 - chr3L_16_3510001 chr3L_3510001 RAL-307_125b 1742 chr3L 3539917 3539992 chr3L 3540046 3540131 17 135 7.0 2.0 4.5 3.1 214 chr3L 3539917 intron Eip63E + chr3L 3540024 intron Eip63E + chr3L 3540131 intron Eip63E + chr3L_17_3540001 chr3L_3540001 RAL-307_125b 1743 chr3L 3573119 3573193 chr3L 3573250 3573326 41 130 15.5 8.5 12.0 3.2 207 chr3L 3573119 intron Eip63E + chr3L 3573222 intron Eip63E + chr3L 3573326 intron Eip63E + chr3L_41_3570001 chr3L_3570001 RAL-307_125b 1744 chr3L 3585556 3585622 chr3L 3585698 3585764 5 142 0.0 6.5 3.2 1.2 208 chr3L 3585556 intron Eip63E + chr3L 3585660 intron Eip63E + chr3L 3585764 intron Eip63E + chr3L_5_3585001 chr3L_3585001 RAL-307_125b 1745 chr3L 3601255 3601278 chr3L 3606616 3606639 copia 15 5360 14.5 10.5 12.5 1.1 5384 chr3L 3601255 intron Eip63E + chr3L 3603947 intron Eip63E + chr3L 3606639 intron Eip63E + chr3L_15_3600001 chr3L_3600001 RAL-307_125b 1746 chr3L 3601280 3601318 chr3L 3606615 3606679 copia 19 5351 8.0 10.5 9.2 1.9 5399 chr3L 3601280 intron Eip63E + chr3L 3603980 intron Eip63E + chr3L 3606679 intron Eip63E + chr3L_19_3600001 chr3L_3600001 RAL-307_125b 1747 chr3L 3601322 3601327 chr3L 3606612 3606688 copia 6 5346 6.5 9.0 7.8 0.7 5366 chr3L 3601322 intron Eip63E + chr3L 3604005 intron Eip63E + chr3L 3606688 intron Eip63E + chr3L_6_3600001 chr3L_3600001 RAL-307_125b 1748 chr3L 3709405 3709465 chr3L 3709540 3709597 12 131 2.5 6.0 4.2 2.3 192 chr3L 3709405 intergenic CR45675 + chr3L 3709501 intergenic not near genes chr3L 3709597 intergenic not near genes chr3L_12_3705001 chr3L_3705001 RAL-307_125b 1749 chr3L 3763718 3763732 chr3L 3763839 3763859 9 126 8.5 0.0 4.2 1.7 141 chr3L 3763718 intron CG32264 - chr3L 3763788 intron CG32264 - chr3L 3763859 intron CG32264 - chr3L_9_3760001 chr3L_3760001 RAL-307_125b 1750 chr3L 3766690 3766762 chr3L 3766826 3766898 15 136 5.5 3.5 4.5 2.7 208 chr3L 3766690 intron CG32264 - chr3L 3766794 intron CG32264 - chr3L 3766898 intron CG32264 - chr3L_15_3765001 chr3L_3765001 RAL-307_125b 1751 chr3L 3768911 3768983 chr3L 3769062 3769134 22 151 7.5 9.0 8.2 2.4 223 chr3L 3768911 intron CG32264 - chr3L 3769022 intron CG32264 - chr3L 3769134 exon CG32264 - chr3L_22_3765001 chr3L_3765001 RAL-307_125b 1752 chr3L 3783222 3783286 chr3L 3783348 3783412 13 124 14.0 5.5 9.8 1.2 190 chr3L 3783222 intron CG32264 - chr3L 3783317 intron CG32264 - chr3L 3783412 intron CG32264 - chr3L_13_3780001 chr3L_3780001 RAL-307_125b 1753 chr3L 3795550 3795614 chr3L 3795677 3795720 25 125 11.5 14.5 13.0 1.8 170 chr3L 3795550 intron CG32264 - chr3L 3795635 intron CG32264 - chr3L 3795720 intron CG32264 - chr3L_25_3795001 chr3L_3795001 RAL-307_125b 1754 chr3L 3797189 3797265 chr3L 3797322 3797398 24 132 0.0 8.0 4.0 4.8 209 chr3L 3797189 intron CG32264 - chr3L 3797294 intron CG32264 - chr3L 3797398 intron CG32264 - chr3L_24_3795001 chr3L_3795001 RAL-307_125b 1755 chr3L 3833692 3833769 chr3L 3833983 3834060 pogo 18 291 8.5 6.5 7.5 2.1 368 chr3L 3833692 intron enc + chr3L 3833876 intron enc + chr3L 3834060 intron enc + chr3L_18_3830001 chr3L_3830001 RAL-307_125b 1756 chr3L 3876569 3876625 chr3L 3876735 3876791 26 164 12.5 10.5 11.5 2.1 222 chr3L 3876569 intergenic not near genes chr3L 3876680 intergenic not near genes chr3L 3876791 intergenic not near genes chr3L_26_3875001 chr3L_3875001 RAL-307_125b 1757 chr3L 3877424 3877445 chr3L 3877602 3877623 6 178 6.0 16.0 11.0 0.5 199 chr3L 3877424 intergenic not near genes chr3L 3877524 intergenic not near genes chr3L 3877623 intergenic not near genes chr3L_6_3875001 chr3L_3875001 RAL-307_125b 1758 chr3L 3890912 3890956 chr3L 3891043 3891087 21 130 13.0 1.5 7.2 2.6 175 chr3L 3890912 intergenic not near genes chr3L 3891000 intergenic not near genes chr3L 3891087 intergenic not near genes chr3L_21_3890001 chr3L_3890001 RAL-307_125b 1759 chr3L 3912746 3912811 chr3L 3912888 3912953 14 141 7.5 0.5 4.0 2.8 207 chr3L 3912746 intron Eip63F-1 - chr3L 3912850 intron Eip63F-1 - chr3L 3912953 intron Eip63F-1 - chr3L_14_3910001 chr3L_3910001 RAL-307_125b 1760 chr3L 3914981 3915049 chr3L 3915108 3915176 34 127 7.5 9.5 8.5 3.6 195 chr3L 3914981 intron Eip63F-1 - chr3L 3915078 intron Eip63F-1 - chr3L 3915176 intron Eip63F-1 - chr3L_34_3915001 chr3L_3915001 RAL-307_125b 1761 chr3L 3925997 3926012 chr3L 3926140 3926155 10 143 16.0 7.0 11.5 0.8 158 chr3L 3925997 intron Eip63F-1 - chr3L 3926076 intron Eip63F-1 - chr3L 3926155 intron Eip63F-1 - chr3L_10_3925001 chr3L_3925001 RAL-307_125b 1762 chr3L 3933767 3933795 chr3L 3933896 3933899 15 125 0.5 6.5 3.5 3.3 132 chr3L 3933767 intron Eip63F-1 - chr3L 3933833 intron Eip63F-1 - chr3L 3933899 intron Eip63F-1 - chr3L_15_3930001 chr3L_3930001 RAL-307_125b 1763 chr3L 3946152 3946161 chr3L 3946279 3946288 4 127 11.0 7.0 9.0 0.4 136 chr3L 3946152 3` UTR CG14982 + chr3L 3946220 3` UTR CG14982 + chr3L 3946288 3` UTR CG14982 + chr3L_4_3945001 chr3L_3945001 RAL-307_125b 1764 chr3L 3946162 3946223 chr3L 3946278 3946350 17 122 7.5 7.0 7.2 2.1 188 chr3L 3946162 3` UTR CG14982 + chr3L 3946256 3` UTR CG14982 + chr3L 3946350 3` UTR CG14982 + chr3L_17_3945001 chr3L_3945001 RAL-307_125b 1765 chr3L 4037998 4038059 chr3L 4038130 4038191 32 130 4.5 13.5 9.0 3.2 193 chr3L 4037998 3` UTR CG11593 - chr3L 4038094 3` UTR CG11593 - chr3L 4038191 3` UTR CG11593 - chr3L_32_4035001 chr3L_4035001 RAL-307_125b 1766 chr3L 4092698 4092701 chr3L 4092892 4092895 4 194 26.0 14.5 20.2 0.2 197 chr3L 4092698 3` UTR CG14989 + chr3L 4092796 intergenic CG14989 +,CG14990 + chr3L 4092895 intergenic CG14989 +,CG14990 + chr3L_4_4090001 chr3L_4090001 RAL-307_125b 1767 chr3L 4092707 4092753 chr3L 4092884 4092938 33 188 13.5 12.5 13.0 2.4 231 chr3L 4092707 intergenic CG14989 +,CG14990 + chr3L 4092822 intergenic CG14989 +,CG14990 + chr3L 4092938 intergenic CG14989 +,CG14990 + chr3L_33_4090001 chr3L_4090001 RAL-307_125b 1768 chr3L 4146773 4146831 chr3L 4146900 4146963 18 130 0.0 10.5 5.2 2.9 190 chr3L 4146773 intergenic not near genes chr3L 4146868 intergenic not near genes chr3L 4146963 intergenic not near genes chr3L_18_4145001 chr3L_4145001 RAL-307_125b 1769 chr3L 4233045 4233067 chr3L 4233183 4233205 14 138 15.5 6.5 11.0 1.2 160 chr3L 4233045 intron ImpL2 - chr3L 4233125 intron ImpL2 - chr3L 4233205 intron ImpL2 - chr3L_14_4230001 chr3L_4230001 RAL-307_125b 1770 chr3L 4233073 4233098 chr3L 4233181 4233236 18 136 7.5 6.5 7.0 2.2 163 chr3L 4233073 intron ImpL2 - chr3L 4233154 intron ImpL2 - chr3L 4233236 intron ImpL2 - chr3L_18_4230001 chr3L_4230001 RAL-307_125b 1771 chr3L 4238718 4238745 chr3L 4238855 4238881 9 137 0.0 0.5 0.2 7.5 163 chr3L 4238718 intergenic not near genes chr3L 4238800 intergenic not near genes chr3L 4238881 intergenic not near genes chr3L_9_4235001 chr3L_4235001 RAL-307_125b 1772 chr3L 4311749 4311798 chr3L 4311902 4311951 34 151 14.5 4.0 9.2 3.3 202 chr3L 4311749 intergenic not near genes chr3L 4311850 intergenic not near genes chr3L 4311951 intergenic not near genes chr3L_34_4310001 chr3L_4310001 RAL-307_125b 1773 chr3L 4320091 4320165 chr3L 4324782 4324862 27 4695 45.0 77.0 61.0 0.4 4771 chr3L 4320091 intron CG32250 + chr3L 4322476 intergenic Cip4 -,CG15014 - chr3L 4324862 intron Cip4 - chr3L_27_4320001 chr3L_4320001 RAL-307_125b 1774 chr3L 4328689 4328758 chr3L 4336237 4336306 412 22 7547 5.0 7.5 6.2 3.1 7617 chr3L 4328689 intron Cip4 - chr3L 4332498 intron Cip4 - chr3L 4336306 exon Cip4 - chr3L_22_4330001 chr3L_4330001 RAL-307_125b 1775 chr3L 4344840 4344911 chr3L 4344997 4345053 13 150 6.5 1.5 4.0 2.6 213 chr3L 4344840 intron Cip4 - chr3L 4344946 intron Cip4 - chr3L 4345053 intron Cip4 - chr3L_13_4340001 chr3L_4340001 RAL-307_125b 1776 chr3L 4389975 4390036 chr3L 4390112 4390173 19 136 7.0 4.5 5.8 2.8 198 chr3L 4389975 intron slow + chr3L 4390074 intron slow + chr3L 4390173 intron slow + chr3L_19_4390001 chr3L_4390001 RAL-307_125b 1777 chr3L 4440706 4440759 chr3L 4440834 4440890 16 129 7.5 2.5 5.0 2.7 184 chr3L 4440706 intergenic not near genes chr3L 4440798 intergenic not near genes chr3L 4440890 intergenic not near genes chr3L_16_4440001 chr3L_4440001 RAL-307_125b 1778 chr3L 4494591 4494638 chr3L 4494753 4494798 15 171 12.0 0.0 6.0 2.1 207 chr3L 4494591 intron CR44709 - chr3L 4494694 3` UTR CR44709 - chr3L 4494798 3` UTR CR44709 - chr3L_15_4490001 chr3L_4490001 RAL-307_125b 1779 chr3L 4529201 4529214 chr3L 4529321 4529346 9 129 10.5 8.5 9.5 0.9 145 chr3L 4529201 intron Tie - chr3L 4529274 intron Tie - chr3L 4529346 intron Tie - chr3L_9_4525001 chr3L_4525001 RAL-307_125b 1780 chr3L 4604821 4604892 chr3L 4604982 4605023 40 153 6.5 11.5 9.0 4.0 202 chr3L 4604821 intron Src64B - chr3L 4604922 intron Src64B - chr3L 4605023 intron Src64B - chr3L_40_4600001 chr3L_4600001 RAL-307_125b 1781 chr3L 4652526 4652594 chr3L 4652659 4652728 26 130 9.0 9.0 9.0 2.6 202 chr3L 4652526 intron axo - chr3L 4652627 intron axo - chr3L 4652728 intron axo - chr3L_26_4650001 chr3L_4650001 RAL-307_125b 1782 chr3L 4657964 4657991 chr3L 4658440 4658478 14 504 0.0 12.5 6.2 1.9 514 chr3L 4657964 intron axo - chr3L 4658221 intron axo - chr3L 4658478 intron axo - chr3L_14_4655001 chr3L_4655001 RAL-307_125b 1783 chr3L 4675988 4676016 chr3L 4676119 4676147 6 131 16.0 8.5 12.2 0.5 159 chr3L 4675988 intron axo - chr3L 4676068 intron axo - chr3L 4676147 intron axo - chr3L_6_4675001 chr3L_4675001 RAL-307_125b 1784 chr3L 4748667 4748727 chr3L 4748808 4748868 23 134 10.0 11.0 10.5 2.0 201 chr3L 4748667 intron RhoGEF64C + chr3L 4748768 intron RhoGEF64C + chr3L 4748868 intron RhoGEF64C + chr3L_23_4745001 chr3L_4745001 RAL-307_125b 1785 chr3L 4782054 4782126 chr3L 4782204 4782275 26 147 9.0 4.5 6.8 3.3 221 chr3L 4782054 intron RhoGEF64C + chr3L 4782164 intron RhoGEF64C + chr3L 4782275 intron RhoGEF64C + chr3L_26_4780001 chr3L_4780001 RAL-307_125b 1786 chr3L 4797929 4797990 chr3L 4798059 4798110 14 123 1.5 4.0 2.8 3.7 181 chr3L 4797929 intergenic not near genes chr3L 4798020 intergenic not near genes chr3L 4798110 intergenic not near genes chr3L_14_4795001 chr3L_4795001 RAL-307_125b 1787 chr3L 4837848 4837916 chr3L 4837965 4838045 46 127 17.0 17.0 17.0 2.6 197 chr3L 4837848 3` UTR CG13707 - chr3L 4837946 3` UTR CG13707 - chr3L 4838045 3` UTR CG13707 - chr3L_46_4835001 chr3L_4835001 RAL-307_125b 1788 chr3L 4839092 4839130 chr3L 4839208 4839284 13 150 6.0 0.5 3.2 3.1 192 chr3L 4839092 intron CG13707 - chr3L 4839188 intron CG13707 - chr3L 4839284 intron CG13707 - chr3L_13_4835001 chr3L_4835001 RAL-307_125b 1789 chr3L 4858271 4858295 chr3L 4858401 4858423 10 135 20.0 5.0 12.5 0.7 152 chr3L 4858271 intergenic not near genes chr3L 4858347 intergenic not near genes chr3L 4858423 intergenic not near genes chr3L_10_4855001 chr3L_4855001 RAL-307_125b 1790 chr3L 4858298 4858334 chr3L 4858398 4858449 16 127 10.5 5.0 7.8 1.8 151 chr3L 4858298 intergenic not near genes chr3L 4858374 intergenic not near genes chr3L 4858449 intergenic not near genes chr3L_16_4855001 chr3L_4855001 RAL-307_125b 1791 chr3L 4901086 4901155 chr3L 4907326 4907395 diver 20 6235 10.5 9.0 9.8 1.9 6309 chr3L 4901086 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907395 intergenic not near genes chr3L_20_4900001 chr3L_4900001 RAL-307_125b 1792 chr3L 4907926 4907935 chr3L 4908052 4908061 8 126 14.0 5.5 9.8 0.7 135 chr3L 4907926 intergenic not near genes chr3L 4907994 intergenic not near genes chr3L 4908061 intergenic not near genes chr3L_8_4905001 chr3L_4905001 RAL-307_125b 1793 chr3L 4908877 4908933 chr3L 4909035 4909091 12 157 9.5 14.0 11.8 0.9 214 chr3L 4908877 intergenic not near genes chr3L 4908984 intergenic not near genes chr3L 4909091 intergenic not near genes chr3L_12_4905001 chr3L_4905001 RAL-307_125b 1794 chr3L 4989172 4989185 chr3L 4989312 4989320 6 139 0.5 0.5 0.5 4.0 148 chr3L 4989172 intron Con - chr3L 4989246 intron Con - chr3L 4989320 intron Con - chr3L_6_4985001 chr3L_4985001 RAL-307_125b 1795 chr3L 5034120 5034181 chr3L 5043311 5043383 roo 22 9199 3.0 6.5 4.8 3.8 9263 chr3L 5034120 intron Con - chr3L 5038752 intron Con - chr3L 5043383 intron Con - chr3L_22_5035001 chr3L_5035001 RAL-307_125b 1796 chr3L 5045409 5045479 chr3L 5050240 5050310 Doc 21 4831 12.0 11.5 11.8 1.6 4901 chr3L 5045409 5` UTR Con - chr3L 5047860 intron Con - chr3L 5050310 intron Con - chr3L_21_5045001 chr3L_5045001 RAL-307_125b 1797 chr3L 5082338 5082391 chr3L 5082454 5082518 12 126 4.0 5.5 4.8 2.1 180 chr3L 5082338 intergenic not near genes chr3L 5082428 intergenic not near genes chr3L 5082518 intergenic not near genes chr3L_12_5080001 chr3L_5080001 RAL-307_125b 1798 chr3L 5104432 5104503 chr3L 5124616 5124687 38 20183 10.5 11.5 11.0 3.2 20255 chr3L 5104432 intergenic not near genes chr3L 5114560 intergenic not near genes chr3L 5124687 intergenic not near genes chr3L_38_5110001 chr3L_5110001 RAL-307_125b 1799 chr3L 5195356 5195392 chr3L 5195775 5195803 10 427 12.0 13.5 12.8 0.7 447 chr3L 5195356 intron shep - chr3L 5195580 intron shep - chr3L 5195803 intron shep - chr3L_10_5195001 chr3L_5195001 RAL-307_125b 1800 chr3L 5223398 5223403 chr3L 5223500 5223535 4 114 17.0 8.0 12.5 0.3 137 chr3L 5223398 intron shep - chr3L 5223466 intron shep - chr3L 5223535 intron shep - chr3L_4_5220001 chr3L_5220001 RAL-307_125b 1801 chr3L 5223408 5223443 chr3L 5223498 5223575 7 112 8.5 8.5 8.5 0.7 167 chr3L 5223408 intron shep - chr3L 5223492 intron shep - chr3L 5223575 intron shep - chr3L_7_5220001 chr3L_5220001 RAL-307_125b 1802 chr3L 5225020 5225058 chr3L 5225182 5225222 5 163 6.0 0.0 3.0 1.2 202 chr3L 5225020 intron shep - chr3L 5225121 intron shep - chr3L 5225222 intron shep - chr3L_5_5225001 chr3L_5225001 RAL-307_125b 1803 chr3L 5251812 5251863 chr3L 5251941 5251992 4 124 4.5 14.0 9.2 0.4 180 chr3L 5251812 intron shep - chr3L 5251902 intron shep - chr3L 5251992 intron shep - chr3L_4_5250001 chr3L_5250001 RAL-307_125b 1804 chr3L 5261115 5261177 chr3L 5261244 5261306 19 129 13.0 11.5 12.2 1.4 191 chr3L 5261115 intron shep - chr3L 5261210 intron shep - chr3L 5261306 intron shep - chr3L_19_5260001 chr3L_5260001 RAL-307_125b 1805 chr3L 5292224 5292290 chr3L 5292360 5292426 24 133 6.0 3.0 4.5 4.4 202 chr3L 5292224 intergenic not near genes chr3L 5292325 intergenic not near genes chr3L 5292426 intergenic not near genes chr3L_24_5290001 chr3L_5290001 RAL-307_125b 1806 chr3L 5299113 5299170 chr3L 5306599 5306656 Quasimodo 21 7485 5.5 1.0 3.2 5.0 7543 chr3L 5299113 intergenic not near genes chr3L 5302884 intergenic not near genes chr3L 5306656 intergenic not near genes chr3L_21_5300001 chr3L_5300001 RAL-307_125b 1807 chr3L 5327417 5327478 chr3L 5327552 5327613 19 134 9.0 9.5 9.2 1.9 196 chr3L 5327417 intergenic not near genes chr3L 5327515 intergenic not near genes chr3L 5327613 intergenic not near genes chr3L_19_5325001 chr3L_5325001 RAL-307_125b 1808 chr3L 5351059 5351131 chr3L 5351194 5351266 39 134 8.0 11.0 9.5 3.7 207 chr3L 5351059 intron lama - chr3L 5351162 intron lama - chr3L 5351266 intron lama - chr3L_39_5350001 chr3L_5350001 RAL-307_125b 1809 chr3L 5356400 5356406 chr3L 5356527 5356533 6 127 4.5 2.5 3.5 1.3 133 chr3L 5356400 intergenic Klp64D -,lama - chr3L 5356466 intergenic Klp64D - chr3L 5356533 intergenic Klp64D - chr3L_6_5355001 chr3L_5355001 RAL-307_125b 1810 chr3L 5396418 5396444 chr3L 5396554 5396580 14 136 3.5 1.5 2.5 4.0 162 chr3L 5396418 intergenic not near genes chr3L 5396499 intergenic not near genes chr3L 5396580 intergenic not near genes chr3L_14_5395001 chr3L_5395001 RAL-307_125b 1811 chr3L 5458082 5458091 chr3L 5466696 5466712 Max-element 5 8638 4.5 13.0 8.8 0.5 8630 chr3L 5458082 intergenic not near genes chr3L 5462397 intergenic not near genes chr3L 5466712 intergenic not near genes chr3L_5_5460001 chr3L_5460001 RAL-307_125b 1812 chr3L 5504093 5504120 chr3L 5504225 5504252 11 131 5.5 11.5 8.5 1.2 159 chr3L 5504093 exon CG34342 - chr3L 5504172 intron CG34342 - chr3L 5504252 intron CG34342 - chr3L_11_5500001 chr3L_5500001 RAL-307_125b 1813 chr3L 5504513 5504563 chr3L 5504641 5504665 27 127 11.0 7.0 9.0 2.7 152 chr3L 5504513 intron CG34342 - chr3L 5504589 intron CG34342 - chr3L 5504665 intron CG34342 - chr3L_27_5500001 chr3L_5500001 RAL-307_125b 1814 chr3L 5516363 5516440 chr3L 5516502 5516585 15 138 6.5 7.5 7.0 1.9 222 chr3L 5516363 intron Lkr - chr3L 5516474 intron Lkr - chr3L 5516585 intron Lkr - chr3L_15_5515001 chr3L_5515001 RAL-307_125b 1815 chr3L 5531147 5531171 chr3L 5531278 5531302 10 129 25.0 14.5 19.8 0.5 155 chr3L 5531147 intergenic not near genes chr3L 5531224 intergenic not near genes chr3L 5531302 intergenic not near genes chr3L_10_5530001 chr3L_5530001 RAL-307_125b 1816 chr3L 5531174 5531226 chr3L 5531276 5531357 21 125 8.0 14.0 11.0 1.8 183 chr3L 5531174 intergenic not near genes chr3L 5531266 intergenic not near genes chr3L 5531357 intergenic not near genes chr3L_21_5530001 chr3L_5530001 RAL-307_125b 1817 chr3L 5537674 5537751 chr3L 5538066 5538143 jockey 22 390 10.0 11.0 10.5 1.9 469 chr3L 5537674 intergenic not near genes chr3L 5537908 intergenic not near genes chr3L 5538143 intergenic CG10625 - chr3L_22_5535001 chr3L_5535001 RAL-307_125b 1818 chr3L 5572138 5572158 chr3L 5572249 5572284 8 114 12.5 12.0 12.2 0.6 146 chr3L 5572138 intron Msr-110 - chr3L 5572211 intron Msr-110 - chr3L 5572284 intron Msr-110 - chr3L_8_5570001 chr3L_5570001 RAL-307_125b 1819 chr3L 5597764 5597832 chr3L 5597907 5597962 22 129 15.0 0.0 7.5 2.6 198 chr3L 5597764 intergenic CG5150 + chr3L 5597863 intergenic CG5150 + chr3L 5597962 intergenic not near genes chr3L_22_5595001 chr3L_5595001 RAL-307_125b 1820 chr3L 5613444 5613502 chr3L 5613621 5613679 27 177 11.0 12.0 11.5 2.2 235 chr3L 5613444 intergenic not near genes chr3L 5613562 intergenic not near genes chr3L 5613679 intergenic not near genes chr3L_27_5610001 chr3L_5610001 RAL-307_125b 1821 chr3L 5667578 5667650 chr3L 5667708 5667780 14 130 8.0 3.0 5.5 2.2 202 chr3L 5667578 intron sif + chr3L 5667679 intron sif + chr3L 5667780 intron sif + chr3L_14_5665001 chr3L_5665001 RAL-307_125b 1822 chr3L 5727129 5727192 chr3L 5727652 5727670 21 513 8.5 8.5 8.5 2.2 541 chr3L 5727129 intron sif + chr3L 5727400 intron sif + chr3L 5727670 intron sif + chr3L_21_5725001 chr3L_5725001 RAL-307_125b 1823 chr3L 5816763 5816765 chr3L 8716352 8716354 4 2899589 57.0 26.0 41.5 0.1 2899591 chr3L 5816763 intron vn - chr3L 7266558 3` UTR unc-13-4A - chr3L 8716354 intergenic not near genes chr3L_4_7265001 chr3L_7265001 RAL-307_125b 1824 chr3L 5909988 5910056 chr3L 5910279 5910347 pogo 37 291 16.0 10.0 13.0 2.6 359 chr3L 5909988 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910347 intron CG13288 + chr3L_37_5910001 chr3L_5910001 RAL-307_125b 1825 chr3L 5926272 5926292 chr3L 5926511 5926532 7 238 24.0 8.0 16.0 0.4 260 chr3L 5926272 intron Vap-33B + chr3L 5926402 intron Vap-33B + chr3L 5926532 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-307_125b 1826 chr3L 5926294 5926338 chr3L 5926510 5926578 BS 21 232 11.5 8.0 9.8 1.9 284 chr3L 5926294 intron Vap-33B + chr3L 5926436 intron Vap-33B + chr3L 5926578 intron Vap-33B + chr3L_21_5925001 chr3L_5925001 RAL-307_125b 1827 chr3L 5992573 5992621 chr3L 5992725 5992773 22 152 8.5 11.0 9.8 2.0 200 chr3L 5992573 intergenic not near genes chr3L 5992673 intergenic not near genes chr3L 5992773 intergenic not near genes chr3L_22_5990001 chr3L_5990001 RAL-307_125b 1828 chr3L 6001638 6001646 chr3L 6004388 6004396 jockey 6 2750 15.0 0.5 7.8 0.7 2758 chr3L 6001638 intron PVRAP + chr3L 6003017 intron PVRAP + chr3L 6004396 intron PVRAP + chr3L_6_6000001 chr3L_6000001 RAL-307_125b 1829 chr3L 6001650 6001713 chr3L 6004386 6004463 jockey 24 2749 12.0 0.0 6.0 3.4 2813 chr3L 6001650 intron PVRAP + chr3L 6003056 intron PVRAP + chr3L 6004463 intron PVRAP + chr3L_24_6000001 chr3L_6000001 RAL-307_125b 1830 chr3L 6040326 6040384 chr3L 6042727 6042779 Doc 25 2402 15.0 11.5 13.2 1.8 2453 chr3L 6040326 intergenic Jon65Aiv + chr3L 6041552 intergenic not near genes chr3L 6042779 intergenic not near genes chr3L_25_6040001 chr3L_6040001 RAL-307_125b 1831 chr3L 6052629 6052639 chr3L 6052751 6052756 4 124 10.5 10.0 10.2 0.4 127 chr3L 6052629 exon Jon65Aii + chr3L 6052692 intron Jon65Aii + chr3L 6052756 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-307_125b 1832 chr3L 6052648 6052667 chr3L 6052739 6052747 4 98 7.5 10.0 8.8 0.4 99 chr3L 6052648 exon Jon65Aii + chr3L 6052698 intron Jon65Aii + chr3L 6052747 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-307_125b 1833 chr3L 6071709 6071715 chr3L 6071841 6071847 4 132 9.0 0.0 4.5 0.7 138 chr3L 6071709 intergenic CG42269 +,CG6602 + chr3L 6071778 intergenic CG42269 +,CG6602 + chr3L 6071847 intergenic CG6602 +,CG42269 + chr3L_4_6070001 chr3L_6070001 RAL-307_125b 1834 chr3L 6077737 6077749 chr3L 6077867 6077867 4 125 19.5 1.5 10.5 0.3 130 chr3L 6077737 intron ssp6 + chr3L 6077802 intron ssp6 + chr3L 6077867 intron ssp6 + chr3L_4_6075001 chr3L_6075001 RAL-307_125b 1835 chr3L 6077756 6077783 chr3L 6077861 6077913 7 124 13.5 2.5 8.0 0.8 157 chr3L 6077756 intron ssp6 + chr3L 6077834 intron ssp6 + chr3L 6077913 intron ssp6 + chr3L_7_6075001 chr3L_6075001 RAL-307_125b 1836 chr3L 6102901 6102958 chr3L 6103034 6103091 15 133 13.0 0.5 6.8 1.9 190 chr3L 6102901 intron Ets65A + chr3L 6102996 intron Ets65A + chr3L 6103091 intron Ets65A + chr3L_15_6100001 chr3L_6100001 RAL-307_125b 1837 chr3L 6116655 6116727 chr3L 6116789 6116861 27 132 10.0 6.5 8.2 2.9 206 chr3L 6116655 intron Ets65A + chr3L 6116758 intron Ets65A + chr3L 6116861 intron Ets65A + chr3L_27_6115001 chr3L_6115001 RAL-307_125b 1838 chr3L 6119102 6119139 chr3L 6119229 6119255 5 125 10.5 0.5 5.5 0.8 153 chr3L 6119102 exon Ets65A + chr3L 6119178 intron Ets65A + chr3L 6119255 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-307_125b 1839 chr3L 6124351 6124356 chr3L 6124503 6124506 5 153 6.0 20.5 13.2 0.4 155 chr3L 6124351 exon l(3)mbn - chr3L 6124428 exon l(3)mbn - chr3L 6124506 exon l(3)mbn - chr3L_5_6120001 chr3L_6120001 RAL-307_125b 1840 chr3L 6142687 6142756 chr3L 6142995 6143017 27 305 11.0 7.0 9.0 2.7 330 chr3L 6142687 intergenic Cpr65Aw - chr3L 6142852 intergenic Cpr65Aw - chr3L 6143017 intergenic Lcp65Ad + chr3L_27_6140001 chr3L_6140001 RAL-307_125b 1841 chr3L 6155653 6155712 chr3L 6155789 6155848 31 136 14.0 13.0 13.5 2.1 195 chr3L 6155653 intergenic CR45421 - chr3L 6155750 intergenic not near genes chr3L 6155848 intergenic not near genes chr3L_31_6155001 chr3L_6155001 RAL-307_125b 1842 chr3L 6220872 6220940 chr3L 6230074 6230142 roo 32 9199 11.5 11.5 11.5 2.6 9270 chr3L 6220872 5` UTR pncr008:3L + chr3L 6225507 intergenic not near genes chr3L 6230142 intergenic not near genes chr3L_32_6225001 chr3L_6225001 RAL-307_125b 1843 chr3L 6314968 6315040 chr3L 6315115 6315131 6 126 3.0 0.5 1.8 2.1 163 chr3L 6314968 intergenic not near genes chr3L 6315050 intergenic not near genes chr3L 6315131 intergenic not near genes chr3L_6_6315001 chr3L_6315001 RAL-307_125b 1844 chr3L 6334965 6335034 chr3L 6335486 6335555 297 32 517 9.5 11.5 10.5 2.8 590 chr3L 6334965 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335555 intron CG13300 - chr3L_32_6335001 chr3L_6335001 RAL-307_125b 1845 chr3L 6353338 6353401 chr3L 6353458 6353517 14 112 6.0 4.5 5.2 2.3 179 chr3L 6353338 intergenic not near genes chr3L 6353428 intergenic not near genes chr3L 6353517 intergenic not near genes chr3L_14_6350001 chr3L_6350001 RAL-307_125b 1846 chr3L 6369718 6369768 chr3L 6369872 6369922 5 154 8.5 0.0 4.2 1.0 204 chr3L 6369718 intergenic CR45419 - chr3L 6369820 intergenic CR45419 - chr3L 6369922 intergenic CR45419 - chr3L_5_6365001 chr3L_6365001 RAL-307_125b 1847 chr3L 6405616 6405691 chr3L 6432130 6432139 roo 30 26510 6.0 12.5 9.2 2.9 26523 chr3L 6405616 intron CG42747 + chr3L 6418878 intron CG42747 + chr3L 6432139 intron CG42747 + chr3L_30_6415001 chr3L_6415001 RAL-307_125b 1848 chr3L 6456306 6456318 chr3L 6456440 6456452 5 134 12.0 23.0 17.5 0.3 146 chr3L 6456306 intron CG42747 + chr3L 6456379 intron CG42747 + chr3L 6456452 intron CG42747 + chr3L_5_6455001 chr3L_6455001 RAL-307_125b 1849 chr3L 6481939 6481961 chr3L 6482068 6482086 15 128 30.0 11.5 20.8 0.7 147 chr3L 6481939 intron CG42747 + chr3L 6482012 intron CG42747 + chr3L 6482086 intron CG42747 + chr3L_15_6480001 chr3L_6480001 RAL-307_125b 1850 chr3L 6513341 6513375 chr3L 6513477 6513511 17 135 5.5 9.0 7.2 2.1 170 chr3L 6513341 intron sfl + chr3L 6513426 intron sfl + chr3L 6513511 intron sfl + chr3L_17_6510001 chr3L_6510001 RAL-307_125b 1851 chr3L 6582418 6582492 chr3L 6582564 6582624 37 150 5.5 7.5 6.5 4.9 206 chr3L 6582418 intron,intron CG18769 +,jv - chr3L 6582521 intron,intron CG18769 +,jv - chr3L 6582624 intron,intron CG18769 +,jv - chr3L_37_6580001 chr3L_6580001 RAL-307_125b 1852 chr3L 6620564 6620601 chr3L 6621054 6621066 Rt1c 18 486 7.0 14.0 10.5 1.6 502 chr3L 6620564 intergenic not near genes chr3L 6620815 intergenic not near genes chr3L 6621066 intergenic not near genes chr3L_18_6620001 chr3L_6620001 RAL-307_125b 1853 chr3L 6781080 6781104 chr3L 6783143 6783167 Doc 13 2063 23.5 12.0 17.8 0.7 2087 chr3L 6781080 intergenic not near genes chr3L 6782124 intergenic not near genes chr3L 6783167 intergenic not near genes chr3L_13_6780001 chr3L_6780001 RAL-307_125b 1854 chr3L 6781107 6781154 chr3L 6783138 6783142 Doc 15 2055 8.5 10.5 9.5 1.4 2035 chr3L 6781107 intergenic not near genes chr3L 6782124 intergenic not near genes chr3L 6783142 intergenic not near genes chr3L_15_6780001 chr3L_6780001 RAL-307_125b 1855 chr3L 6820592 6820641 chr3L 6820726 6820757 16 132 3.0 5.0 4.0 3.2 165 chr3L 6820592 intergenic not near genes chr3L 6820674 intergenic not near genes chr3L 6820757 intergenic not near genes chr3L_16_6820001 chr3L_6820001 RAL-307_125b 1856 chr3L 6855882 6855938 chr3L 6860717 6860773 Doc 14 4830 8.5 3.5 6.0 2.0 4891 chr3L 6855882 intergenic not near genes chr3L 6858328 intergenic not near genes chr3L 6860773 intergenic not near genes chr3L_14_6855001 chr3L_6855001 RAL-307_125b 1857 chr3L 6887477 6887513 chr3L 6895019 6895055 roo 21 7542 14.0 6.5 10.2 1.9 7578 chr3L 6887477 intergenic not near genes chr3L 6891266 intergenic not near genes chr3L 6895055 intergenic not near genes chr3L_21_6890001 chr3L_6890001 RAL-307_125b 1858 chr3L 6908472 6908531 chr3L 6908599 6908659 20 127 5.0 5.0 5.0 3.3 187 chr3L 6908472 intergenic not near genes chr3L 6908566 intergenic not near genes chr3L 6908659 intergenic not near genes chr3L_20_6905001 chr3L_6905001 RAL-307_125b 1859 chr3L 6934301 6934302 chr3L 6934460 6934463 4 160 22.0 5.5 13.8 0.3 162 chr3L 6934301 exon CG14820 + chr3L 6934382 intron CG14820 + chr3L 6934463 intron CG14820 + chr3L_4_6930001 chr3L_6930001 RAL-307_125b 1860 chr3L 6934303 6934313 chr3L 6934458 6934474 5 160 20.0 5.5 12.8 0.4 171 chr3L 6934303 exon CG14820 + chr3L 6934388 intron CG14820 + chr3L 6934474 intron CG14820 + chr3L_5_6930001 chr3L_6930001 RAL-307_125b 1861 chr3L 6934316 6934352 chr3L 6934447 6934513 12 158 12.5 4.0 8.2 1.3 197 chr3L 6934316 exon CG14820 + chr3L 6934414 intron CG14820 + chr3L 6934513 exon CG14820 + chr3L_12_6930001 chr3L_6930001 RAL-307_125b 1862 chr3L 6974448 6974516 chr3L 6974593 6974661 12 148 2.5 9.5 6.0 1.7 213 chr3L 6974448 exon Galphai - chr3L 6974554 intron Galphai - chr3L 6974661 intron Galphai - chr3L_12_6970001 chr3L_6970001 RAL-307_125b 1863 chr3L 6981904 6981937 chr3L 6982100 6982141 11 203 2.0 10.5 6.2 1.5 237 chr3L 6981904 intergenic not near genes chr3L 6982022 intergenic not near genes chr3L 6982141 intergenic not near genes chr3L_11_6980001 chr3L_6980001 RAL-307_125b 1864 chr3L 6994846 6994891 chr3L 6995497 6995540 BS 9 651 0.0 1.5 0.8 5.0 694 chr3L 6994846 intergenic bin + chr3L 6995193 intergenic not near genes chr3L 6995540 intergenic not near genes chr3L_9_6995001 chr3L_6995001 RAL-307_125b 1865 chr3L 7001943 7001975 chr3L 7002114 7002146 11 171 11.5 11.0 11.2 0.9 203 chr3L 7001943 intron Mp + chr3L 7002044 intron Mp + chr3L 7002146 intron Mp + chr3L_11_7000001 chr3L_7000001 RAL-307_125b 1866 chr3L 7042191 7042230 chr3L 7042331 7042382 12 150 8.0 11.5 9.8 1.1 191 chr3L 7042191 intron Mp + chr3L 7042286 intron Mp + chr3L 7042382 intron Mp + chr3L_12_7040001 chr3L_7040001 RAL-307_125b 1867 chr3L 7061357 7061405 chr3L 7061493 7061541 29 134 7.5 9.0 8.2 3.2 184 chr3L 7061357 intron CG8641 - chr3L 7061449 intron CG8641 - chr3L 7061541 intron CG8641 - chr3L_29_7060001 chr3L_7060001 RAL-307_125b 1868 chr3L 7086792 7086845 chr3L 7086921 7086975 7 130 7.5 0.0 3.8 1.5 183 chr3L 7086792 intergenic Cpr65Ea - chr3L 7086884 intergenic Cpr65Ea - chr3L 7086975 intergenic Cpr65Ea - chr3L_7_7085001 chr3L_7085001 RAL-307_125b 1869 chr3L 7104588 7104635 chr3L 7104879 7104883 23 300 5.5 10.0 7.8 2.6 295 chr3L 7104588 intron form3 + chr3L 7104736 intron form3 + chr3L 7104883 intron form3 + chr3L_23_7100001 chr3L_7100001 RAL-307_125b 1870 chr3L 7112538 7112605 chr3L 7112674 7112722 32 136 11.5 10.0 10.8 2.7 184 chr3L 7112538 intron form3 + chr3L 7112630 intron form3 + chr3L 7112722 intron form3 + chr3L_32_7110001 chr3L_7110001 RAL-307_125b 1871 chr3L 7129912 7129977 chr3L 7130154 7130204 BS 24 241 2.0 6.0 4.0 4.8 292 chr3L 7129912 intergenic CG15829 + chr3L 7130058 intergenic CG15829 + chr3L 7130204 intergenic not near genes chr3L_24_7130001 chr3L_7130001 RAL-307_125b 1872 chr3L 7150016 7150041 chr3L 7150144 7150170 11 129 2.0 24.5 13.2 0.8 154 chr3L 7150016 intron corn - chr3L 7150093 intron corn - chr3L 7150170 intron corn - chr3L_11_7150001 chr3L_7150001 RAL-307_125b 1873 chr3L 7196805 7196865 chr3L 7196931 7196991 25 123 3.0 9.5 6.2 3.5 186 chr3L 7196805 intergenic not near genes chr3L 7196898 intergenic not near genes chr3L 7196991 intergenic not near genes chr3L_25_7195001 chr3L_7195001 RAL-307_125b 1874 chr3L 7201690 7201764 chr3L 7201817 7201891 23 120 8.5 6.5 7.5 2.7 201 chr3L 7201690 intergenic not near genes chr3L 7201790 intergenic not near genes chr3L 7201891 intergenic not near genes chr3L_23_7200001 chr3L_7200001 RAL-307_125b 1875 chr3L 7216078 7216112 chr3L 7216206 7216237 5 125 9.0 7.5 8.2 0.5 159 chr3L 7216078 intergenic not near genes chr3L 7216158 intergenic not near genes chr3L 7216237 intergenic not near genes chr3L_5_7215001 chr3L_7215001 RAL-307_125b 1876 chr3L 7244890 7244905 chr3L 7245024 7245040 4 135 13.0 4.5 8.8 0.4 150 chr3L 7244890 exon mei-P22 + chr3L 7244965 exon mei-P22 + chr3L 7245040 exon mei-P22 + chr3L_4_7240001 chr3L_7240001 RAL-307_125b 1877 chr3L 7244908 7244958 chr3L 7245022 7245069 20 117 5.0 4.5 4.8 3.4 161 chr3L 7244908 exon mei-P22 + chr3L 7244988 exon mei-P22 + chr3L 7245069 exon mei-P22 + chr3L_20_7240001 chr3L_7240001 RAL-307_125b 1878 chr3L 7252446 7252499 chr3L 7252587 7252640 20 141 8.5 9.0 8.8 2.0 194 chr3L 7252446 5` UTR,intron CR43470 +,CG14830 - chr3L 7252543 5` UTR,intron CR43470 +,CG14830 - chr3L 7252640 intron CG14830 - chr3L_20_7250001 chr3L_7250001 RAL-307_125b 1879 chr3L 7252500 7252511 chr3L 7252581 7252652 5 129 6.0 7.0 6.5 0.7 152 chr3L 7252500 5` UTR,intron CR43470 +,CG14830 - chr3L 7252576 5` UTR,intron CR43470 +,CG14830 - chr3L 7252652 intron CG14830 - chr3L_5_7250001 chr3L_7250001 RAL-307_125b 1880 chr3L 7377270 7377341 chr3L 7380425 7380496 297 29 3154 7.0 7.0 7.0 3.6 3226 chr3L 7377270 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380496 intron SMSr - chr3L_29_7375001 chr3L_7375001 RAL-307_125b 1881 chr3L 7422892 7422903 chr3L 7423029 7423040 7 137 8.0 0.0 4.0 1.4 148 chr3L 7422892 intergenic not near genes chr3L 7422966 intergenic not near genes chr3L 7423040 intergenic not near genes chr3L_7_7420001 chr3L_7420001 RAL-307_125b 1882 chr3L 7436088 7436140 chr3L 7436216 7436228 8 115 12.0 8.5 10.2 0.7 140 chr3L 7436088 intron CG42458 + chr3L 7436158 intron CG42458 + chr3L 7436228 intron CG42458 + chr3L_8_7435001 chr3L_7435001 RAL-307_125b 1883 chr3L 7445315 7445324 chr3L 7445442 7445451 4 127 17.5 6.5 12.0 0.3 136 chr3L 7445315 5` UTR CG42458 + chr3L 7445383 5` UTR CG42458 + chr3L 7445451 5` UTR CG42458 + chr3L_4_7445001 chr3L_7445001 RAL-307_125b 1884 chr3L 7445325 7445383 chr3L 7445441 7445510 13 115 7.5 6.0 6.8 1.7 185 chr3L 7445325 5` UTR CG42458 + chr3L 7445418 5` UTR CG42458 + chr3L 7445510 exon CG42458 + chr3L_13_7445001 chr3L_7445001 RAL-307_125b 1885 chr3L 7498727 7498780 chr3L 7503552 7503607 F-element 18 4825 8.5 13.5 11.0 1.5 4880 chr3L 7498727 5` UTR CG8539 - chr3L 7501167 intergenic not near genes chr3L 7503607 intergenic not near genes chr3L_18_7500001 chr3L_7500001 RAL-307_125b 1886 chr3L 7505395 7505443 chr3L 7505522 7505570 13 126 5.5 5.0 5.2 2.1 175 chr3L 7505395 intergenic CG7548 - chr3L 7505482 intergenic CG7548 - chr3L 7505570 3` UTR CG7548 - chr3L_13_7505001 chr3L_7505001 RAL-307_125b 1887 chr3L 7508629 7508698 chr3L 7508763 7508831 23 133 10.5 0.5 5.5 3.5 202 chr3L 7508629 intergenic not near genes chr3L 7508730 intergenic not near genes chr3L 7508831 intergenic not near genes chr3L_23_7505001 chr3L_7505001 RAL-307_125b 1888 chr3L 7524099 7524166 chr3L 7524246 7524313 31 147 16.5 2.0 9.2 3.0 214 chr3L 7524099 intron ltl + chr3L 7524206 intron ltl + chr3L 7524313 intron ltl + chr3L_31_7520001 chr3L_7520001 RAL-307_125b 1889 chr3L 7536955 7536971 chr3L 7537138 7537155 8 184 24.0 17.0 20.5 0.4 200 chr3L 7536955 intron lqf + chr3L 7537055 3` UTR lqf + chr3L 7537155 3` UTR lqf + chr3L_8_7535001 chr3L_7535001 RAL-307_125b 1890 chr3L 7536972 7537020 chr3L 7537137 7537209 37 183 10.0 16.5 13.2 2.6 237 chr3L 7536972 intron lqf + chr3L 7537090 3` UTR lqf + chr3L 7537209 3` UTR lqf + chr3L_37_7535001 chr3L_7535001 RAL-307_125b 1891 chr3L 7591107 7591128 chr3L 7591248 7591264 4 137 16.5 7.5 12.0 0.3 157 chr3L 7591107 intergenic CG7716 - chr3L 7591186 intergenic CG7716 - chr3L 7591264 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 RAL-307_125b 1892 chr3L 7591133 7591140 chr3L 7591246 7591273 4 129 16.0 7.0 11.5 0.3 140 chr3L 7591133 intergenic CG7716 - chr3L 7591203 intergenic CG7716 - chr3L 7591273 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 RAL-307_125b 1893 chr3L 7591142 7591179 chr3L 7591241 7591283 10 118 5.5 6.0 5.8 1.5 141 chr3L 7591142 intergenic CG7716 - chr3L 7591212 intergenic CG7716 - chr3L 7591283 intergenic CG7716 - chr3L_10_7590001 chr3L_7590001 RAL-307_125b 1894 chr3L 7745725 7745734 chr3L 7745856 7745865 4 131 12.0 0.0 6.0 0.6 140 chr3L 7745725 intron CG32373 + chr3L 7745795 intron CG32373 + chr3L 7745865 intron CG32373 + chr3L_4_7745001 chr3L_7745001 RAL-307_125b 1895 chr3L 7767529 7767538 chr3L 7767708 7767719 5 180 23.0 21.0 22.0 0.2 190 chr3L 7767529 intron,exon Clk -,CG32371 - chr3L 7767624 intron,exon Clk -,CG32371 - chr3L 7767719 intron,exon Clk -,CG32371 - chr3L_5_7765001 chr3L_7765001 RAL-307_125b 1896 chr3L 7767542 7767554 chr3L 7767693 7767717 9 168 20.5 19.0 19.8 0.4 175 chr3L 7767542 intron,exon Clk -,CG32371 - chr3L 7767630 intron,exon Clk -,CG32371 - chr3L 7767717 intron,exon Clk -,CG32371 - chr3L_9_7765001 chr3L_7765001 RAL-307_125b 1897 chr3L 7793671 7793732 chr3L 7800773 7800834 297 36 7101 15.0 17.5 16.2 2.1 7163 chr3L 7793671 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800834 intron CG32369 - chr3L_36_7795001 chr3L_7795001 RAL-307_125b 1898 chr3L 7868564 7868584 chr3L 7868693 7868713 10 129 0.0 10.0 5.0 1.7 149 chr3L 7868564 intergenic CG32365 + chr3L 7868638 intergenic CG32365 + chr3L 7868713 intergenic CG32365 + chr3L_10_7865001 chr3L_7865001 RAL-307_125b 1899 chr3L 7869626 7869674 chr3L 7869756 7869758 4 118 14.5 0.5 7.5 0.5 132 chr3L 7869626 exon CG32365 + chr3L 7869692 exon CG32365 + chr3L 7869758 exon CG32365 + chr3L_4_7865001 chr3L_7865001 RAL-307_125b 1900 chr3L 7871045 7871057 chr3L 7871194 7871206 10 149 0.0 22.0 11.0 0.8 161 chr3L 7871045 intron CG32365 + chr3L 7871126 intron CG32365 + chr3L 7871206 intron CG32365 + chr3L_10_7870001 chr3L_7870001 RAL-307_125b 1901 chr3L 7874978 7875064 chr3L 7876858 7876944 12 1879 20.0 50.0 35.0 0.3 1966 chr3L 7874978 intron CG32365 + chr3L 7875961 intron CG32365 + chr3L 7876944 intron CG32365 + chr3L_12_7875001 chr3L_7875001 RAL-307_125b 1902 chr3L 7874875 7874889 chr3L 7877210 7877223 5 2334 22.0 57.5 39.8 0.1 2348 chr3L 7874875 intron CG32365 + chr3L 7876049 intron CG32365 + chr3L 7877223 intron CG32365 + chr3L_5_7875001 chr3L_7875001 RAL-307_125b 1903 chr3L 7883705 7883748 chr3L 7883912 7883925 11 202 3.5 0.0 1.8 3.9 220 chr3L 7883705 intron CG32365 + chr3L 7883815 intron CG32365 + chr3L 7883925 intron CG32365 + chr3L_11_7880001 chr3L_7880001 RAL-307_125b 1904 chr3L 7916786 7916796 chr3L 7926007 7926017 roo 7 9221 27.0 14.5 20.8 0.3 9231 chr3L 7916786 3` UTR syd - chr3L 7921402 intron syd - chr3L 7926017 3` UTR syd - chr3L_7_7920001 chr3L_7920001 RAL-307_125b 1905 chr3L 7916799 7916859 chr3L 7926004 7926055 roo 22 9219 8.5 13.0 10.8 1.9 9256 chr3L 7916799 3` UTR syd - chr3L 7921427 intron syd - chr3L 7926055 3` UTR syd - chr3L_22_7920001 chr3L_7920001 RAL-307_125b 1906 chr3L 7939411 7939469 chr3L 7939538 7939601 21 129 9.0 13.0 11.0 1.8 190 chr3L 7939411 intergenic not near genes chr3L 7939506 intergenic not near genes chr3L 7939601 intergenic not near genes chr3L_21_7935001 chr3L_7935001 RAL-307_125b 1907 chr3L 7943036 7943047 chr3L 7943171 7943182 9 135 20.5 12.0 16.2 0.5 146 chr3L 7943036 intergenic not near genes chr3L 7943109 intergenic not near genes chr3L 7943182 intergenic not near genes chr3L_9_7940001 chr3L_7940001 RAL-307_125b 1908 chr3L 7943048 7943099 chr3L 7943165 7943234 24 130 10.5 12.5 11.5 1.9 186 chr3L 7943048 intergenic not near genes chr3L 7943141 intergenic not near genes chr3L 7943234 intergenic not near genes chr3L_24_7940001 chr3L_7940001 RAL-307_125b 1909 chr3L 7956452 7956476 chr3L 7956580 7956604 11 128 5.5 9.5 7.5 1.3 152 chr3L 7956452 intergenic not near genes chr3L 7956528 intergenic not near genes chr3L 7956604 intergenic not near genes chr3L_11_7955001 chr3L_7955001 RAL-307_125b 1910 chr3L 7985329 7985386 chr3L 7987700 7987764 NOF 21 2375 12.0 8.5 10.2 1.9 2435 chr3L 7985329 intron nmo + chr3L 7986546 intron nmo + chr3L 7987764 intron nmo + chr3L_21_7985001 chr3L_7985001 RAL-307_125b 1911 chr3L 7999780 7999860 chr3L 7999912 7999993 39 126 7.5 8.0 7.8 4.4 213 chr3L 7999780 intron nmo + chr3L 7999886 intron nmo + chr3L 7999993 intron nmo + chr3L_39_7995001 chr3L_7995001 RAL-307_125b 1912 chr3L 8062803 8062846 chr3L 8062932 8062959 12 124 23.0 11.5 17.2 0.7 156 chr3L 8062803 intergenic not near genes chr3L 8062881 intergenic not near genes chr3L 8062959 intergenic not near genes chr3L_12_8060001 chr3L_8060001 RAL-307_125b 1913 chr3L 8081236 8081305 chr3L 8081382 8081458 28 152 8.5 10.0 9.2 2.7 222 chr3L 8081236 intron Ect4 + chr3L 8081347 intron Ect4 + chr3L 8081458 intron Ect4 + chr3L_28_8080001 chr3L_8080001 RAL-307_125b 1914 chr3L 8203498 8203569 chr3L 8203619 8203662 14 117 6.5 4.5 5.5 2.2 164 chr3L 8203498 intergenic CG13679 + chr3L 8203580 intergenic CG13679 + chr3L 8203662 intergenic CG13679 + chr3L_14_8200001 chr3L_8200001 RAL-307_125b 1915 chr3L 8208080 8208155 chr3L 8208262 8208337 30 177 9.0 5.5 7.2 3.7 257 chr3L 8208080 intergenic not near genes chr3L 8208208 intergenic not near genes chr3L 8208337 intergenic not near genes chr3L_30_8205001 chr3L_8205001 RAL-307_125b 1916 chr3L 8210751 8210805 chr3L 8210916 8210970 25 160 4.0 5.0 4.5 4.5 219 chr3L 8210751 intergenic CG32364 - chr3L 8210860 intergenic CG32364 - chr3L 8210970 intergenic CG32364 - chr3L_25_8210001 chr3L_8210001 RAL-307_125b 1917 chr3L 8226700 8226750 chr3L 8226849 8226892 5 143 1.0 0.0 0.5 3.3 192 chr3L 8226700 intergenic not near genes chr3L 8226796 intergenic not near genes chr3L 8226892 intergenic not near genes chr3L_5_8225001 chr3L_8225001 RAL-307_125b 1918 chr3L 8233542 8233590 chr3L 8238854 8238858 Rt1a 12 5306 11.5 16.0 13.8 0.8 5316 chr3L 8233542 intron CG7213 - chr3L 8236200 intron CG7213 - chr3L 8238858 intron,intron CG7213 -,Dscam4 + chr3L_12_8235001 chr3L_8235001 RAL-307_125b 1919 chr3L 8302010 8302018 chr3L 8304263 8304274 4 2252 42.0 73.5 57.8 0.1 2264 chr3L 8302010 exon CG13671 + chr3L 8303142 exon CG7194 - chr3L 8304274 exon Sbp2 + chr3L_4_8300001 chr3L_8300001 RAL-307_125b 1920 chr3L 8302009 8302018 chr3L 8304275 8304315 12 2265 42.0 72.5 57.2 0.2 2306 chr3L 8302009 exon CG13671 + chr3L 8303162 exon CG7194 - chr3L 8304315 exon Sbp2 + chr3L_12_8300001 chr3L_8300001 RAL-307_125b 1921 chr3L 8302004 8302084 chr3L 8304318 8304331 8 2270 67.5 64.0 65.8 0.1 2327 chr3L 8302004 exon CG13671 + chr3L 8303168 exon CG7194 - chr3L 8304331 exon Sbp2 + chr3L_8_8300001 chr3L_8300001 RAL-307_125b 1922 chr3L 8336893 8336925 chr3L 8337004 8337051 18 124 14.5 19.0 16.8 1.0 158 chr3L 8336893 intron Cpr66Cb + chr3L 8336972 intron Cpr66Cb + chr3L 8337051 intron Cpr66Cb + chr3L_18_8335001 chr3L_8335001 RAL-307_125b 1923 chr3L 8364481 8364496 chr3L 8364622 8364636 6 141 18.0 7.0 12.5 0.4 155 chr3L 8364481 intergenic not near genes chr3L 8364558 intergenic not near genes chr3L 8364636 intergenic not near genes chr3L_6_8360001 chr3L_8360001 RAL-307_125b 1924 chr3L 8364500 8364528 chr3L 8364616 8364669 13 139 14.0 7.0 10.5 1.1 169 chr3L 8364500 intergenic not near genes chr3L 8364584 intergenic not near genes chr3L 8364669 intergenic not near genes chr3L_13_8360001 chr3L_8360001 RAL-307_125b 1925 chr3L 8371732 8371745 chr3L 8371868 8371881 4 136 0.0 10.5 5.2 0.6 149 chr3L 8371732 intergenic not near genes chr3L 8371806 intergenic not near genes chr3L 8371881 intergenic not near genes chr3L_4_8370001 chr3L_8370001 RAL-307_125b 1926 chr3L 8395787 8395840 chr3L 8395933 8395980 10 143 15.5 5.5 10.5 0.9 193 chr3L 8395787 intergenic CG7120 + chr3L 8395884 intergenic CG7120 + chr3L 8395980 intergenic CG7120 + chr3L_10_8395001 chr3L_8395001 RAL-307_125b 1927 chr3L 8395841 8395868 chr3L 8395928 8395957 9 112 9.0 5.0 7.0 1.1 116 chr3L 8395841 intergenic CG7120 + chr3L 8395899 intergenic CG7120 + chr3L 8395957 intergenic CG7120 + chr3L_9_8395001 chr3L_8395001 RAL-307_125b 1928 chr3L 8442896 8442905 chr3L 8443011 8443031 7 124 1.5 18.5 10.0 0.6 135 chr3L 8442896 intergenic CG6983 - chr3L 8442964 intergenic CG6983 - chr3L 8443031 intergenic CG6983 - chr3L_7_8440001 chr3L_8440001 RAL-307_125b 1929 chr3L 8451344 8451410 chr3L 8451472 8451538 41 126 9.0 9.5 9.2 4.0 194 chr3L 8451344 intron Gug + chr3L 8451441 intron Gug + chr3L 8451538 intron Gug + chr3L_41_8450001 chr3L_8450001 RAL-307_125b 1930 chr3L 8481759 8481805 chr3L 8490958 8491014 roo 16 9197 8.0 11.0 9.5 1.5 9255 chr3L 8481759 intron CG43163 - chr3L 8486386 intron CG43163 - chr3L 8491014 intron CG43163 - chr3L_16_8485001 chr3L_8485001 RAL-307_125b 1931 chr3L 8498265 8498320 chr3L 8505772 8505837 blood 33 7517 9.5 8.0 8.8 3.4 7572 chr3L 8498265 intron CG43163 - chr3L 8502051 intron CG43163 - chr3L 8505837 intron CG43163 - chr3L_33_8500001 chr3L_8500001 RAL-307_125b 1932 chr3L 8558612 8558622 chr3L 8558753 8558763 6 141 29.0 11.0 20.0 0.3 151 chr3L 8558612 intron rhea + chr3L 8558688 intron rhea + chr3L 8558763 intron rhea + chr3L_6_8555001 chr3L_8555001 RAL-307_125b 1933 chr3L 8558624 8558688 chr3L 8558752 8558821 27 137 11.5 11.0 11.2 2.2 197 chr3L 8558624 intron rhea + chr3L 8558722 intron rhea + chr3L 8558821 intron rhea + chr3L_27_8555001 chr3L_8555001 RAL-307_125b 1934 chr3L 8643530 8643602 chr3L 8643656 8643728 38 125 11.5 10.5 11.0 3.2 198 chr3L 8643530 3` UTR Cpr66D + chr3L 8643629 intergenic Cpr66D + chr3L 8643728 intergenic Cpr66D + chr3L_38_8640001 chr3L_8640001 RAL-307_125b 1935 chr3L 8791238 8791304 chr3L 8796708 8796773 I-element 17 5469 5.0 3.0 4.0 3.4 5535 chr3L 8791238 exon Fhos + chr3L 8794006 intron Fhos + chr3L 8796773 intron Fhos + chr3L_17_8790001 chr3L_8790001 RAL-307_125b 1936 chr3L 8839681 8839749 chr3L 8839811 8839879 38 129 11.0 11.0 11.0 3.2 198 chr3L 8839681 intron dally + chr3L 8839780 intron dally + chr3L 8839879 intron dally + chr3L_38_8835001 chr3L_8835001 RAL-307_125b 1937 chr3L 8849181 8849242 chr3L 8849311 8849376 15 129 7.5 10.5 9.0 1.5 195 chr3L 8849181 intron dally + chr3L 8849278 intron dally + chr3L 8849376 intron dally + chr3L_15_8845001 chr3L_8845001 RAL-307_125b 1938 chr3L 8959354 8959388 chr3L 8959565 8959599 12 210 9.0 18.0 13.5 0.8 245 chr3L 8959354 intron CG13313 + chr3L 8959476 intron CG13313 + chr3L 8959599 intron CG13313 + chr3L_12_8955001 chr3L_8955001 RAL-307_125b 1939 chr3L 8959389 8959402 chr3L 8959558 8959613 8 206 6.5 17.5 12.0 0.6 224 chr3L 8959389 intron CG13313 + chr3L 8959501 intron CG13313 + chr3L 8959613 intron CG13313 + chr3L_8_8955001 chr3L_8955001 RAL-307_125b 1940 chr3L 9003899 9003973 chr3L 9004034 9004108 35 131 6.5 8.0 7.2 4.3 209 chr3L 9003899 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004108 intergenic not near genes chr3L_35_9000001 chr3L_9000001 RAL-307_125b 1941 chr3L 9009914 9009973 chr3L 9010068 9010127 17 154 5.5 7.5 6.5 2.3 213 chr3L 9009914 intergenic CG5194 - chr3L 9010020 intergenic CG5194 - chr3L 9010127 intergenic CG5194 - chr3L_17_9010001 chr3L_9010001 RAL-307_125b 1942 chr3L 9030378 9030452 chr3L 9030507 9030581 21 126 10.0 5.5 7.8 2.4 203 chr3L 9030378 intergenic not near genes chr3L 9030480 intergenic not near genes chr3L 9030581 intergenic not near genes chr3L_21_9030001 chr3L_9030001 RAL-307_125b 1943 chr3L 9047045 9047085 chr3L 9047182 9047186 6 131 0.0 7.5 3.8 1.2 141 chr3L 9047045 intergenic CG5144 + chr3L 9047116 intergenic CG5144 + chr3L 9047186 intergenic CG5144 + chr3L_6_9045001 chr3L_9045001 RAL-307_125b 1944 chr3L 9047094 9047112 chr3L 9047179 9047249 12 132 0.0 6.5 3.2 2.9 155 chr3L 9047094 intergenic CG5144 + chr3L 9047172 intergenic CG5144 + chr3L 9047249 intergenic CG5144 + chr3L_12_9045001 chr3L_9045001 RAL-307_125b 1945 chr3L 9076891 9076899 chr3L 9084501 9084509 412 5 7610 27.5 16.0 21.8 0.2 7618 chr3L 9076891 exon Tequila + chr3L 9080700 intron Tequila + chr3L 9084509 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-307_125b 1946 chr3L 9076901 9076960 chr3L 9084494 9084495 412 22 7600 10.5 13.5 12.0 1.7 7594 chr3L 9076901 exon Tequila + chr3L 9080698 intron Tequila + chr3L 9084495 exon Tequila + chr3L_22_9080001 chr3L_9080001 RAL-307_125b 1947 chr3L 9109714 9109776 chr3L 9110355 9110431 23 651 6.0 8.0 7.0 2.9 717 chr3L 9109714 intron bol - chr3L 9110072 intron bol - chr3L 9110431 intron bol - chr3L_23_9110001 chr3L_9110001 RAL-307_125b 1948 chr3L 9130516 9130579 chr3L 9134327 9134390 412 12 3804 8.5 8.0 8.2 1.3 3874 chr3L 9130516 intergenic bol - chr3L 9132453 intergenic not near genes chr3L 9134390 intergenic Dhpr + chr3L_12_9130001 chr3L_9130001 RAL-307_125b 1949 chr3L 9164649 9164682 chr3L 9166166 9166199 hobo 14 1516 18.5 0.5 9.5 1.3 1550 chr3L 9164649 intron Rdl - chr3L 9165424 intron Rdl - chr3L 9166199 intron Rdl - chr3L_14_9165001 chr3L_9165001 RAL-307_125b 1950 chr3L 9219217 9219264 chr3L 9219918 9219986 jockey 17 713 5.0 3.0 4.0 3.4 769 chr3L 9219217 intergenic not near genes chr3L 9219602 intergenic not near genes chr3L 9219986 intergenic not near genes chr3L_17_9215001 chr3L_9215001 RAL-307_125b 1951 chr3L 9239674 9239724 chr3L 9239999 9240054 16 346 6.5 3.5 5.0 2.7 380 chr3L 9239674 intergenic not near genes chr3L 9239864 intergenic not near genes chr3L 9240054 intergenic not near genes chr3L_16_9235001 chr3L_9235001 RAL-307_125b 1952 chr3L 9241073 9241147 chr3L 9241203 9241276 30 130 9.5 7.0 8.2 3.3 203 chr3L 9241073 intergenic not near genes chr3L 9241174 intergenic not near genes chr3L 9241276 intergenic not near genes chr3L_30_9240001 chr3L_9240001 RAL-307_125b 1953 chr3L 9270578 9270640 chr3L 9278383 9278413 roo 11 7795 9.0 8.5 8.8 1.1 7835 chr3L 9270578 intron GluRIB + chr3L 9274496 intron GluRIB + chr3L 9278413 exon GluRIB + chr3L_11_9270001 chr3L_9270001 RAL-307_125b 1954 chr3L 9302432 9302483 chr3L 9302567 9302600 17 133 4.5 0.0 2.2 5.3 168 chr3L 9302432 intergenic not near genes chr3L 9302516 intergenic not near genes chr3L 9302600 intergenic not near genes chr3L_17_9300001 chr3L_9300001 RAL-307_125b 1955 chr3L 9307796 9307796 chr3L 22908066 22908066 9 13600270 49.0 43.5 46.2 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_9_16105001 chr3L_16105001 RAL-307_125b 1956 chr3L 9312678 9312733 chr3L 9312804 9312861 21 127 13.0 9.0 11.0 1.8 183 chr3L 9312678 intergenic not near genes chr3L 9312770 intergenic not near genes chr3L 9312861 intergenic not near genes chr3L_21_9310001 chr3L_9310001 RAL-307_125b 1957 chr3L 9359548 9359613 chr3L 9359689 9359754 50 140 12.5 9.0 10.8 4.2 206 chr3L 9359548 3` UTR CG32039 + chr3L 9359651 3` UTR CG32039 + chr3L 9359754 3` UTR CG32039 + chr3L_50_9355001 chr3L_9355001 RAL-307_125b 1958 chr3L 9443491 9443493 chr3L 9445328 9445330 S-element 4 1837 12.0 16.5 14.2 0.3 1839 chr3L 9443491 intron CG33926 + chr3L 9444410 intron CG33926 + chr3L 9445330 intron CG33926 + chr3L_4_9440001 chr3L_9440001 RAL-307_125b 1959 chr3L 9443495 9443543 chr3L 9445306 9445364 S-element 26 1833 6.5 13.0 9.8 2.4 1869 chr3L 9443495 intron CG33926 + chr3L 9444430 intron CG33926 + chr3L 9445364 intron CG33926 + chr3L_26_9440001 chr3L_9440001 RAL-307_125b 1960 chr3L 9498161 9498215 chr3L 9498288 9498342 31 126 15.5 8.5 12.0 2.4 181 chr3L 9498161 intron path - chr3L 9498252 intron path - chr3L 9498342 intron path - chr3L_31_9495001 chr3L_9495001 RAL-307_125b 1961 chr3L 9501661 9501730 chr3L 9502197 9502205 roo 32 532 9.0 12.5 10.8 2.7 544 chr3L 9501661 intron path - chr3L 9501933 intron path - chr3L 9502205 intron path - chr3L_32_9500001 chr3L_9500001 RAL-307_125b 1962 chr3L 9503413 9503463 chr3L 9503552 9503586 11 137 13.5 15.0 14.2 0.7 173 chr3L 9503413 intron path - chr3L 9503500 intron path - chr3L 9503586 intron path - chr3L_11_9500001 chr3L_9500001 RAL-307_125b 1963 chr3L 9506670 9506700 chr3L 9506804 9506834 19 134 6.5 22.5 14.5 1.2 164 chr3L 9506670 intergenic CG3408 - chr3L 9506752 intergenic CG3408 - chr3L 9506834 3` UTR CG3408 - chr3L_19_9505001 chr3L_9505001 RAL-307_125b 1964 chr3L 9513415 9513471 chr3L 9513546 9513608 27 136 13.5 17.5 15.5 1.6 193 chr3L 9513415 intergenic CG33702 - chr3L 9513512 intergenic CG33702 - chr3L 9513608 intergenic CG33702 - chr3L_27_9510001 chr3L_9510001 RAL-307_125b 1965 chr3L 9520090 9520114 chr3L 9520628 9520669 8 550 17.5 11.0 14.2 0.5 579 chr3L 9520090 intron CG33700 - chr3L 9520380 intron CG33700 - chr3L 9520669 intron CG33700 - chr3L_8_9520001 chr3L_9520001 RAL-307_125b 1966 chr3L 9520115 9520148 chr3L 9520626 9520703 10 540 10.0 9.5 9.8 0.9 588 chr3L 9520115 intron CG33700 - chr3L 9520409 intron CG33700 - chr3L 9520703 intron CG33700 - chr3L_10_9520001 chr3L_9520001 RAL-307_125b 1967 chr3L 9526447 9526510 chr3L 9528177 9528209 Doc 28 1728 5.5 12.5 9.0 2.8 1762 chr3L 9526447 intergenic not near genes chr3L 9527328 intergenic not near genes chr3L 9528209 intergenic not near genes chr3L_28_9525001 chr3L_9525001 RAL-307_125b 1968 chr3L 9533733 9533763 chr3L 9541330 9541373 412 4 7604 12.0 12.0 12.0 0.3 7640 chr3L 9533733 intergenic not near genes chr3L 9537553 intergenic not near genes chr3L 9541373 intergenic not near genes chr3L_4_9535001 chr3L_9535001 RAL-307_125b 1969 chr3L 9575863 9575949 chr3L 9580991 9581042 jockey 32 5124 8.5 5.0 6.8 4.1 5179 chr3L 9575863 intron CG42673 + chr3L 9578452 intron CG42673 + chr3L 9581042 intron CG42673 + chr3L_32_9575001 chr3L_9575001 RAL-307_125b 1970 chr3L 9600297 9600342 chr3L 9600446 9600496 14 149 17.0 1.0 9.0 1.4 199 chr3L 9600297 3` UTR CG3222 + chr3L 9600396 intergenic CG3222 +,CG3088 - chr3L 9600496 3` UTR CG3088 - chr3L_14_9600001 chr3L_9600001 RAL-307_125b 1971 chr3L 9604198 9604248 chr3L 9604342 9604392 12 144 0.0 4.5 2.2 3.8 194 chr3L 9604198 intron CG3280 + chr3L 9604295 intron CG3280 + chr3L 9604392 intron CG3280 + chr3L_12_9600001 chr3L_9600001 RAL-307_125b 1972 chr3L 9629688 9629763 chr3L 9629814 9629889 27 126 6.0 11.5 8.8 2.8 201 chr3L 9629688 intron CG8336 + chr3L 9629788 intron CG8336 + chr3L 9629889 intron CG8336 + chr3L_27_9625001 chr3L_9625001 RAL-307_125b 1973 chr3L 9689469 9689476 chr3L 9689599 9689605 6 130 16.0 10.0 13.0 0.4 136 chr3L 9689469 intron CG6767 - chr3L 9689537 intron CG6767 - chr3L 9689605 intron CG6767 - chr3L_6_9685001 chr3L_9685001 RAL-307_125b 1974 chr3L 9689482 9689523 chr3L 9689592 9689653 18 124 9.5 10.5 10.0 1.6 171 chr3L 9689482 intron CG6767 - chr3L 9689568 intron CG6767 - chr3L 9689653 intron CG6767 - chr3L_18_9685001 chr3L_9685001 RAL-307_125b 1975 chr3L 9697736 9697789 chr3L 9697878 9697931 26 142 18.5 18.0 18.2 1.4 195 chr3L 9697736 intergenic not near genes chr3L 9697834 intergenic not near genes chr3L 9697931 intergenic UbcD4 + chr3L_26_9695001 chr3L_9695001 RAL-307_125b 1976 chr3L 9715554 9715621 chr3L 9715680 9715748 21 126 9.5 9.0 9.2 2.1 194 chr3L 9715554 intron vsg + chr3L 9715651 intron vsg + chr3L 9715748 exon vsg + chr3L_21_9715001 chr3L_9715001 RAL-307_125b 1977 chr3L 9741574 9741651 chr3L 9741716 9741763 32 141 7.5 7.5 7.5 3.8 189 chr3L 9741574 intron,intron CG42268 -,CR44348 + chr3L 9741668 intron,intron CG42268 -,CR44348 + chr3L 9741763 intron,intron CG42268 -,CR44348 + chr3L_32_9740001 chr3L_9740001 RAL-307_125b 1978 chr3L 9754699 9754709 chr3L 9754833 9754843 7 134 6.5 0.0 3.2 1.7 144 chr3L 9754699 intron CG42268 - chr3L 9754771 intron CG42268 - chr3L 9754843 intron CG42268 - chr3L_7_9750001 chr3L_9750001 RAL-307_125b 1979 chr3L 9809692 9809742 chr3L 9809804 9809858 16 122 11.5 8.5 10.0 1.5 166 chr3L 9809692 intergenic not near genes chr3L 9809775 intergenic not near genes chr3L 9809858 intergenic not near genes chr3L_16_9805001 chr3L_9805001 RAL-307_125b 1980 chr3L 9839972 9840030 chr3L 9840123 9840181 32 150 7.5 20.5 14.0 2.1 209 chr3L 9839972 3` UTR RasGAP1 - chr3L 9840076 3` UTR RasGAP1 - chr3L 9840181 3` UTR RasGAP1 - chr3L_32_9840001 chr3L_9840001 RAL-307_125b 1981 chr3L 9871697 9871725 chr3L 9871889 9871917 9 191 21.0 12.5 16.8 0.5 220 chr3L 9871697 intergenic not near genes chr3L 9871807 intergenic not near genes chr3L 9871917 intergenic not near genes chr3L_9_9870001 chr3L_9870001 RAL-307_125b 1982 chr3L 9871728 9871751 chr3L 9871878 9871956 8 188 12.0 8.0 10.0 0.7 228 chr3L 9871728 intergenic not near genes chr3L 9871842 intergenic not near genes chr3L 9871956 intergenic not near genes chr3L_8_9870001 chr3L_9870001 RAL-307_125b 1983 chr3L 9926566 9926590 chr3L 9926693 9926717 13 126 0.5 10.0 5.2 2.1 151 chr3L 9926566 intron CG34356 + chr3L 9926642 intron CG34356 + chr3L 9926717 intron CG34356 + chr3L_13_9925001 chr3L_9925001 RAL-307_125b 1984 chr3L 9929636 9929643 chr3L 9938456 9938473 roo 6 8826 29.0 9.5 19.2 0.3 8837 chr3L 9929636 intron CG34356 + chr3L 9934054 intron CG34356 + chr3L 9938473 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-307_125b 1985 chr3L 9929644 9929699 chr3L 9938453 9938504 roo 27 8826 10.0 9.5 9.8 2.5 8860 chr3L 9929644 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938504 intron CG34356 + chr3L_27_9930001 chr3L_9930001 RAL-307_125b 1986 chr3L 9973949 9973990 chr3L 9974098 9974138 5 149 6.5 0.0 3.2 1.2 189 chr3L 9973949 3` UTR,3` UTR CG42455 +,vnc + chr3L 9974044 intergenic CG42455 +,vnc + chr3L 9974138 intergenic CG42455 +,vnc + chr3L_5_9970001 chr3L_9970001 RAL-307_125b 1987 chr3L 9976964 9976988 chr3L 9977079 9977109 11 127 0.0 8.0 4.0 2.2 145 chr3L 9976964 intron dpr6 + chr3L 9977036 intron dpr6 + chr3L 9977109 intron dpr6 + chr3L_11_9975001 chr3L_9975001 RAL-307_125b 1988 chr3L 9987083 9987143 chr3L 9987190 9987271 20 120 9.5 9.0 9.2 2.0 188 chr3L 9987083 intron dpr6 + chr3L 9987177 intron dpr6 + chr3L 9987271 intron dpr6 + chr3L_20_9985001 chr3L_9985001 RAL-307_125b 1989 chr3L 9992653 9992730 chr3L 9992779 9992857 14 126 8.0 2.0 5.0 2.3 204 chr3L 9992653 intron dpr6 + chr3L 9992755 intron dpr6 + chr3L 9992857 intron dpr6 + chr3L_14_9990001 chr3L_9990001 RAL-307_125b 1990 chr3L 9994055 9994088 chr3L 9994191 9994223 8 136 7.5 15.0 11.2 0.7 168 chr3L 9994055 intron dpr6 + chr3L 9994139 intron dpr6 + chr3L 9994223 intron dpr6 + chr3L_8_9990001 chr3L_9990001 RAL-307_125b 1991 chr3L 10003106 10003177 chr3L 10003253 10003324 30 145 9.0 3.5 6.2 4.2 218 chr3L 10003106 intron dpr6 + chr3L 10003215 intron dpr6 + chr3L 10003324 intron dpr6 + chr3L_30_10000001 chr3L_10000001 RAL-307_125b 1992 chr3L 10007140 10007206 chr3L 10007292 10007359 27 152 4.5 9.0 6.8 3.5 219 chr3L 10007140 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007359 intron dpr6 + chr3L_27_10005001 chr3L_10005001 RAL-307_125b 1993 chr3L 10016510 10016580 chr3L 10016642 10016719 14 132 1.5 2.0 1.8 5.0 209 chr3L 10016510 intron dpr6 + chr3L 10016614 intron dpr6 + chr3L 10016719 intron dpr6 + chr3L_14_10015001 chr3L_10015001 RAL-307_125b 1994 chr3L 10032497 10032565 chr3L 10032633 10032702 12 135 0.0 5.0 2.5 3.4 205 chr3L 10032497 intron dpr6 + chr3L 10032600 intron dpr6 + chr3L 10032702 intron dpr6 + chr3L_12_10030001 chr3L_10030001 RAL-307_125b 1995 chr3L 10082517 10082583 chr3L 10082649 10082715 24 129 1.5 7.0 4.2 4.6 198 chr3L 10082517 intron dpr6 + chr3L 10082616 intron dpr6 + chr3L 10082715 intron dpr6 + chr3L_24_10080001 chr3L_10080001 RAL-307_125b 1996 chr3L 10127702 10127729 chr3L 10127829 10127851 11 126 19.5 1.0 10.2 1.0 149 chr3L 10127702 intron dpr6 + chr3L 10127776 intron dpr6 + chr3L 10127851 intron dpr6 + chr3L_11_10125001 chr3L_10125001 RAL-307_125b 1997 chr3L 10143938 10144011 chr3L 10144386 10144444 34 447 9.5 10.0 9.8 3.1 506 chr3L 10143938 intergenic not near genes chr3L 10144191 intergenic not near genes chr3L 10144444 intergenic not near genes chr3L_34_10140001 chr3L_10140001 RAL-307_125b 1998 chr3L 10161427 10161457 chr3L 10161525 10161586 13 124 0.0 9.5 4.8 2.2 159 chr3L 10161427 intron dpr10 - chr3L 10161506 intron dpr10 - chr3L 10161586 intron dpr10 - chr3L_13_10160001 chr3L_10160001 RAL-307_125b 1999 chr3L 10186623 10186663 chr3L 10186766 10186776 10 140 15.5 0.0 7.8 1.1 153 chr3L 10186623 intergenic not near genes chr3L 10186700 intergenic not near genes chr3L 10186776 intergenic not near genes chr3L_10_10185001 chr3L_10185001 RAL-307_125b 2000 chr3L 10214728 10214831 chr3L 10214914 10214983 23 178 0.0 6.0 3.0 5.8 255 chr3L 10214728 intergenic not near genes chr3L 10214856 intergenic not near genes chr3L 10214983 intergenic not near genes chr3L_23_10210001 chr3L_10210001 RAL-307_125b 2001 chr3L 10222690 10222771 chr3L 10222820 10222901 21 129 1.5 5.5 3.5 4.7 211 chr3L 10222690 intron scramb1 - chr3L 10222796 intron scramb1 - chr3L 10222901 intron scramb1 - chr3L_21_10220001 chr3L_10220001 RAL-307_125b 2002 chr3L 10298633 10298693 chr3L 10298765 10298830 20 136 0.0 5.5 2.8 5.3 197 chr3L 10298633 intergenic not near genes chr3L 10298732 intergenic not near genes chr3L 10298830 intergenic not near genes chr3L_20_10295001 chr3L_10295001 RAL-307_125b 2003 chr3L 10300004 10300072 chr3L 10300146 10300214 20 137 3.0 6.0 4.5 3.6 210 chr3L 10300004 intergenic not near genes chr3L 10300109 intergenic not near genes chr3L 10300214 intergenic not near genes chr3L_20_10300001 chr3L_10300001 RAL-307_125b 2004 chr3L 10308714 10308724 chr3L 10308827 10308851 6 125 3.5 12.5 8.0 0.7 137 chr3L 10308714 intergenic not near genes chr3L 10308782 intergenic not near genes chr3L 10308851 intergenic not near genes chr3L_6_10305001 chr3L_10305001 RAL-307_125b 2005 chr3L 10308729 10308764 chr3L 10308815 10308871 13 118 5.5 11.5 8.5 1.4 142 chr3L 10308729 intergenic not near genes chr3L 10308800 intergenic not near genes chr3L 10308871 intergenic not near genes chr3L_13_10305001 chr3L_10305001 RAL-307_125b 2006 chr3L 10328065 10328127 chr3L 10328227 10328289 27 162 12.5 9.0 10.8 2.3 224 chr3L 10328065 intergenic not near genes chr3L 10328177 intergenic not near genes chr3L 10328289 intergenic not near genes chr3L_27_10325001 chr3L_10325001 RAL-307_125b 2007 chr3L 10397254 10397328 chr3L 10397383 10397457 24 127 8.5 9.5 9.0 2.4 203 chr3L 10397254 intergenic not near genes chr3L 10397356 intergenic not near genes chr3L 10397457 intergenic not near genes chr3L_24_10395001 chr3L_10395001 RAL-307_125b 2008 chr3L 10414899 10414903 chr3L 10417314 10417323 Doc 4 2419 21.0 7.0 14.0 0.3 2424 chr3L 10414899 intergenic CG12362 + chr3L 10416111 intergenic not near genes chr3L 10417323 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-307_125b 2009 chr3L 10414904 10414974 chr3L 10417310 10417358 Doc 17 2416 7.5 5.0 6.2 2.4 2454 chr3L 10414904 intergenic CG12362 + chr3L 10416131 intergenic not near genes chr3L 10417358 intergenic not near genes chr3L_17_10415001 chr3L_10415001 RAL-307_125b 2010 chr3L 10417539 10417600 chr3L 10417652 10417673 13 109 9.5 10.0 9.8 1.2 134 chr3L 10417539 intergenic not near genes chr3L 10417606 intergenic not near genes chr3L 10417673 intergenic not near genes chr3L_13_10415001 chr3L_10415001 RAL-307_125b 2011 chr3L 10469897 10469907 chr3L 10470023 10470033 5 126 32.0 1.0 16.5 0.3 136 chr3L 10469897 intergenic not near genes chr3L 10469965 intergenic not near genes chr3L 10470033 intergenic not near genes chr3L_5_10465001 chr3L_10465001 RAL-307_125b 2012 chr3L 10469908 10469935 chr3L 10470021 10470061 11 123 25.5 1.0 13.2 0.8 153 chr3L 10469908 intergenic not near genes chr3L 10469984 intergenic not near genes chr3L 10470061 intergenic not near genes chr3L_11_10465001 chr3L_10465001 RAL-307_125b 2013 chr3L 10474187 10474199 chr3L 10474318 10474330 8 131 9.5 1.5 5.5 1.2 143 chr3L 10474187 intergenic not near genes chr3L 10474258 intergenic not near genes chr3L 10474330 intergenic not near genes chr3L_8_10470001 chr3L_10470001 RAL-307_125b 2014 chr3L 10476148 10476208 chr3L 10476315 10476372 23 163 10.5 6.5 8.5 2.4 224 chr3L 10476148 intergenic not near genes chr3L 10476260 intergenic not near genes chr3L 10476372 intergenic not near genes chr3L_23_10475001 chr3L_10475001 RAL-307_125b 2015 chr3L 10495501 10495573 chr3L 10496117 10496189 19 613 7.5 4.0 5.8 2.8 688 chr3L 10495501 intron A2bp1 + chr3L 10495845 intron A2bp1 + chr3L 10496189 intron A2bp1 + chr3L_19_10495001 chr3L_10495001 RAL-307_125b 2016 chr3L 10565090 10565162 chr3L 10565880 10565957 33 793 9.5 5.0 7.2 4.0 867 chr3L 10565090 intron A2bp1 + chr3L 10565524 intron A2bp1 + chr3L 10565957 intron A2bp1 + chr3L_33_10565001 chr3L_10565001 RAL-307_125b 2017 chr3L 10584229 10584299 chr3L 10584366 10584436 34 136 11.0 10.5 10.8 2.9 207 chr3L 10584229 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584436 intron A2bp1 + chr3L_34_10580001 chr3L_10580001 RAL-307_125b 2018 chr3L 10600414 10600476 chr3L 10600538 10600603 30 127 7.5 4.0 5.8 4.4 189 chr3L 10600414 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600603 intergenic not near genes chr3L_30_10600001 chr3L_10600001 RAL-307_125b 2019 chr3L 10603664 10603732 chr3L 10603904 10603972 22 237 1.5 3.5 2.5 6.3 308 chr3L 10603664 intergenic not near genes chr3L 10603818 intergenic not near genes chr3L 10603972 intergenic not near genes chr3L_22_10600001 chr3L_10600001 RAL-307_125b 2020 chr3L 10620191 10620228 chr3L 10620317 10620354 6 126 10.0 3.5 6.8 0.8 163 chr3L 10620191 intergenic not near genes chr3L 10620272 intergenic not near genes chr3L 10620354 intergenic not near genes chr3L_6_10620001 chr3L_10620001 RAL-307_125b 2021 chr3L 10621818 10621873 chr3L 10621955 10622010 23 135 5.5 13.0 9.2 2.3 192 chr3L 10621818 intergenic not near genes chr3L 10621914 intergenic not near genes chr3L 10622010 intergenic not near genes chr3L_23_10620001 chr3L_10620001 RAL-307_125b 2022 chr3L 10658056 10658204 chr3L 10658183 10658381 34 160 0.0 0.0 0.0 34.0 325 chr3L 10658056 intron CG32066 - chr3L 10658218 intron CG32066 - chr3L 10658381 intron CG32066 - chr3L_34_10655001 chr3L_10655001 RAL-307_125b 2023 chr3L 10735787 10735808 chr3L 10735924 10735945 10 137 5.5 0.0 2.8 2.6 158 chr3L 10735787 intergenic not near genes chr3L 10735866 intergenic not near genes chr3L 10735945 intergenic not near genes chr3L_10_10735001 chr3L_10735001 RAL-307_125b 2024 chr3L 10739761 10739807 chr3L 10739895 10739895 8 127 5.0 0.0 2.5 2.3 134 chr3L 10739761 intergenic not near genes chr3L 10739828 intergenic not near genes chr3L 10739895 intergenic not near genes chr3L_8_10735001 chr3L_10735001 RAL-307_125b 2025 chr3L 10762798 10762851 chr3L 10762919 10762975 19 122 10.5 7.0 8.8 1.9 177 chr3L 10762798 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762975 intergenic not near genes chr3L_19_10760001 chr3L_10760001 RAL-307_125b 2026 chr3L 10947462 10947476 chr3L 10947588 10947602 5 126 0.0 3.0 1.5 2.0 140 chr3L 10947462 intergenic not near genes chr3L 10947532 intergenic not near genes chr3L 10947602 intergenic not near genes chr3L_5_10945001 chr3L_10945001 RAL-307_125b 2027 chr3L 10951244 10951294 chr3L 10951370 10951420 11 126 1.5 3.5 2.5 3.1 176 chr3L 10951244 intergenic not near genes chr3L 10951332 intergenic not near genes chr3L 10951420 intergenic not near genes chr3L_11_10950001 chr3L_10950001 RAL-307_125b 2028 chr3L 10956402 10956468 chr3L 10956570 10956636 14 162 4.5 3.5 4.0 2.8 234 chr3L 10956402 intergenic not near genes chr3L 10956519 intergenic not near genes chr3L 10956636 intergenic not near genes chr3L_14_10955001 chr3L_10955001 RAL-307_125b 2029 chr3L 10956956 10957032 chr3L 10957082 10957155 29 125 13.0 16.0 14.5 1.9 199 chr3L 10956956 intergenic not near genes chr3L 10957056 intergenic not near genes chr3L 10957155 intergenic not near genes chr3L_29_10955001 chr3L_10955001 RAL-307_125b 2030 chr3L 10958158 10958161 chr3L 10958290 10958293 6 132 24.5 0.0 12.2 0.5 135 chr3L 10958158 intergenic not near genes chr3L 10958226 intergenic not near genes chr3L 10958293 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-307_125b 2031 chr3L 10958167 10958226 chr3L 10958289 10958325 8 124 7.5 0.0 3.8 1.7 158 chr3L 10958167 intergenic not near genes chr3L 10958246 intergenic not near genes chr3L 10958325 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-307_125b 2032 chr3L 11018514 11018571 chr3L 11018650 11018707 14 136 9.0 10.5 9.8 1.3 193 chr3L 11018514 intergenic not near genes chr3L 11018610 intergenic not near genes chr3L 11018707 intergenic not near genes chr3L_14_11015001 chr3L_11015001 RAL-307_125b 2033 chr3L 11029385 11029438 chr3L 11029546 11029562 19 158 6.0 4.5 5.2 3.1 177 chr3L 11029385 3` UTR CG32081 + chr3L 11029474 intergenic CG32081 + chr3L 11029562 intergenic CG32081 + chr3L_19_11025001 chr3L_11025001 RAL-307_125b 2034 chr3L 11053630 11053646 chr3L 11053770 11053772 7 138 10.0 0.0 5.0 1.2 142 chr3L 11053630 intergenic CG7888 + chr3L 11053701 intergenic CG7888 + chr3L 11053772 intergenic CG7888 + chr3L_7_11050001 chr3L_11050001 RAL-307_125b 2035 chr3L 11083463 11083534 chr3L 11083611 11083622 43 145 12.0 17.0 14.5 2.8 159 chr3L 11083463 exon JIL-1 - chr3L 11083542 intron JIL-1 - chr3L 11083622 intron JIL-1 - chr3L_43_11080001 chr3L_11080001 RAL-307_125b 2036 chr3L 11087015 11087084 chr3L 11088853 11088923 S-element 35 1836 11.5 5.5 8.5 3.7 1908 chr3L 11087015 intron JIL-1 - chr3L 11087969 intron JIL-1 - chr3L 11088923 intron JIL-1 - chr3L_35_11085001 chr3L_11085001 RAL-307_125b 2037 chr3L 11104028 11104106 chr3L 11104157 11104237 8 131 7.5 0.5 4.0 1.6 209 chr3L 11104028 intergenic CG32071 - chr3L 11104132 intergenic CG32071 - chr3L 11104237 intergenic CG32071 - chr3L_8_11100001 chr3L_11100001 RAL-307_125b 2038 chr3L 11105253 11105324 chr3L 11107010 11107050 X-element 28 1756 7.5 4.0 5.8 4.1 1797 chr3L 11105253 intergenic not near genes chr3L 11106152 intergenic not near genes chr3L 11107050 exon CG32073 - chr3L_28_11105001 chr3L_11105001 RAL-307_125b 2039 chr3L 11113945 11113993 chr3L 11114072 11114103 20 123 13.5 1.5 7.5 2.4 158 chr3L 11113945 intergenic Sod -,fd68A - chr3L 11114024 intergenic fd68A -,Sod - chr3L 11114103 intergenic fd68A -,Sod - chr3L_20_11110001 chr3L_11110001 RAL-307_125b 2040 chr3L 11135478 11135514 chr3L 11135758 11135794 14 280 6.5 0.5 3.5 3.1 316 chr3L 11135478 3` UTR CG14143 + chr3L 11135636 intergenic CG14143 +,CG32082 + chr3L 11135794 intergenic CG32082 +,CG14143 + chr3L_14_11135001 chr3L_11135001 RAL-307_125b 2041 chr3L 11145535 11145551 chr3L 11145657 11145689 13 135 0.5 12.0 6.2 1.8 154 chr3L 11145535 intron CG32082 + chr3L 11145612 intron CG32082 + chr3L 11145689 intron CG32082 + chr3L_13_11145001 chr3L_11145001 RAL-307_125b 2042 chr3L 11237623 11237632 chr3L 11237753 11237762 7 130 10.0 0.5 5.2 1.1 139 chr3L 11237623 intergenic CR44718 -,CR44719 + chr3L 11237692 intergenic CR44718 -,CR44719 + chr3L 11237762 intergenic CR44718 -,CR44719 + chr3L_7_11235001 chr3L_11235001 RAL-307_125b 2043 chr3L 11241728 11241788 chr3L 11241860 11241920 23 132 8.5 8.0 8.2 2.5 192 chr3L 11241728 intergenic not near genes chr3L 11241824 intergenic not near genes chr3L 11241920 intergenic not near genes chr3L_23_11240001 chr3L_11240001 RAL-307_125b 2044 chr3L 11264426 11264433 chr3L 11271425 11271435 17.6 5 7000 25.5 9.5 17.5 0.3 7009 chr3L 11264426 intergenic not near genes chr3L 11267930 intergenic not near genes chr3L 11271435 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-307_125b 2045 chr3L 11264434 11264455 chr3L 11271420 11271457 17.6 16 6999 22.0 8.0 15.0 1.0 7023 chr3L 11264434 intergenic not near genes chr3L 11267946 intergenic not near genes chr3L 11271457 intergenic not near genes chr3L_16_11265001 chr3L_11265001 RAL-307_125b 2046 chr3L 11264457 11264483 chr3L 11271419 11271464 17.6 8 6995 16.0 7.5 11.8 0.6 7007 chr3L 11264457 intergenic not near genes chr3L 11267960 intergenic not near genes chr3L 11271464 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-307_125b 2047 chr3L 11329658 11329719 chr3L 11332913 11332974 jockey 15 3253 11.0 11.0 11.0 1.2 3316 chr3L 11329658 intergenic not near genes chr3L 11331316 intergenic not near genes chr3L 11332974 intergenic not near genes chr3L_15_11330001 chr3L_11330001 RAL-307_125b 2048 chr3L 11435518 11435583 chr3L 11435734 11435802 34 216 9.0 9.0 9.0 3.4 284 chr3L 11435518 intergenic CG6149 -,CR44548 + chr3L 11435660 5` UTR CR44548 + chr3L 11435802 5` UTR CR44548 + chr3L_34_11435001 chr3L_11435001 RAL-307_125b 2049 chr3L 11441350 11441370 chr3L 11441479 11441499 5 129 0.0 12.0 6.0 0.7 149 chr3L 11441350 intergenic not near genes chr3L 11441424 intergenic not near genes chr3L 11441499 intergenic not near genes chr3L_5_11440001 chr3L_11440001 RAL-307_125b 2050 chr3L 11475509 11475573 chr3L 11475701 11475762 7 191 0.0 12.0 6.0 1.0 253 chr3L 11475509 3` UTR Vha16-2 + chr3L 11475636 intergenic Vha16-2 + chr3L 11475762 intergenic Vha16-2 + chr3L_7_11475001 chr3L_11475001 RAL-307_125b 2051 chr3L 11499015 11499029 chr3L 11508224 11508238 roo 5 9209 24.5 0.5 12.5 0.4 9223 chr3L 11499015 3` UTR chrb + chr3L 11503626 intergenic not near genes chr3L 11508238 intergenic CG33500 + chr3L_5_11500001 chr3L_11500001 RAL-307_125b 2052 chr3L 11564799 11564803 chr3L 11572420 11572421 412 5 7634 6.5 10.5 8.5 0.5 7622 chr3L 11564799 exon CG33267 + chr3L 11568610 intron CG33267 + chr3L 11572421 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-307_125b 2053 chr3L 11579507 11579585 chr3L 11579662 11579726 49 152 7.0 0.0 3.5 10.9 219 chr3L 11579507 intergenic CG43390 - chr3L 11579616 intergenic CG43390 - chr3L 11579726 intergenic CG43390 - chr3L_49_11575001 chr3L_11575001 RAL-307_125b 2054 chr3L 11590241 11590273 chr3L 11590381 11590413 11 139 1.0 11.5 6.2 1.5 172 chr3L 11590241 intergenic CG7377 + chr3L 11590327 intergenic CG7377 + chr3L 11590413 intergenic CG7377 +,CG33268 - chr3L_11_11590001 chr3L_11590001 RAL-307_125b 2055 chr3L 11648464 11648520 chr3L 11648597 11648653 12 132 15.0 2.0 8.5 1.3 189 chr3L 11648464 5` UTR RIOK1 - chr3L 11648558 intergenic RIOK1 -,CG7339 + chr3L 11648653 intergenic CG7339 +,RIOK1 - chr3L_12_11645001 chr3L_11645001 RAL-307_125b 2056 chr3L 11659378 11659450 chr3L 11659753 11659825 23 370 4.5 6.5 5.5 3.5 447 chr3L 11659378 intron CG32085 - chr3L 11659602 intron CG32085 - chr3L 11659825 intron CG32085 - chr3L_23_11655001 chr3L_11655001 RAL-307_125b 2057 chr3L 11678049 11678118 chr3L 11678186 11678255 27 136 5.5 9.5 7.5 3.2 206 chr3L 11678049 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678255 intron CG32085 - chr3L_27_11675001 chr3L_11675001 RAL-307_125b 2058 chr3L 11723047 11723107 chr3L 11727892 11727952 Doc 34 4845 12.5 12.5 12.5 2.5 4905 chr3L 11723047 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727952 3` UTR Bmcp + chr3L_34_11725001 chr3L_11725001 RAL-307_125b 2059 chr3L 11743972 11744044 chr3L 11744128 11744202 17 154 5.0 2.0 3.5 3.8 230 chr3L 11743972 exon CG6024 - chr3L 11744087 intron CG6024 - chr3L 11744202 intron CG6024 - chr3L_17_11740001 chr3L_11740001 RAL-307_125b 2060 chr3L 11746620 11746683 chr3L 11746749 11746802 14 127 0.0 8.0 4.0 2.8 182 chr3L 11746620 intron CG6024 - chr3L 11746711 intron CG6024 - chr3L 11746802 intron CG6024 - chr3L_14_11745001 chr3L_11745001 RAL-307_125b 2061 chr3L 11757882 11757908 chr3L 11758029 11758055 5 147 7.0 0.0 3.5 1.1 173 chr3L 11757882 intron CG6024 - chr3L 11757968 intron CG6024 - chr3L 11758055 intron CG6024 - chr3L_5_11755001 chr3L_11755001 RAL-307_125b 2062 chr3L 11846358 11846413 chr3L 11846516 11846560 12 156 1.0 11.5 6.2 1.7 202 chr3L 11846358 intergenic not near genes chr3L 11846459 intergenic not near genes chr3L 11846560 intergenic not near genes chr3L_12_11845001 chr3L_11845001 RAL-307_125b 2063 chr3L 11847093 11847156 chr3L 11847233 11847296 20 140 10.5 0.0 5.2 3.2 203 chr3L 11847093 intergenic CG12521 - chr3L 11847194 intergenic CG12521 - chr3L 11847296 intergenic CG12521 - chr3L_20_11845001 chr3L_11845001 RAL-307_125b 2064 chr3L 11849283 11849354 chr3L 11849433 11849494 44 146 4.0 8.5 6.2 6.1 211 chr3L 11849283 intergenic not near genes chr3L 11849388 intergenic not near genes chr3L 11849494 intergenic not near genes chr3L_44_11845001 chr3L_11845001 RAL-307_125b 2065 chr3L 11850096 11850130 chr3L 11850241 11850275 22 143 15.0 1.0 8.0 2.4 179 chr3L 11850096 intergenic not near genes chr3L 11850186 intergenic CG44837 - chr3L 11850275 intergenic CG44837 - chr3L_22_11850001 chr3L_11850001 RAL-307_125b 2066 chr3L 11864515 11864581 chr3L 11865850 11865921 pogo 31 1337 12.5 12.0 12.2 2.3 1406 chr3L 11864515 intron CG44837 - chr3L 11865218 intron CG44837 - chr3L 11865921 intron CG44837 - chr3L_31_11865001 chr3L_11865001 RAL-307_125b 2067 chr3L 11887208 11887266 chr3L 11887355 11887417 22 149 19.0 0.0 9.5 2.1 209 chr3L 11887208 intron CG44837 - chr3L 11887312 intron,3` UTR CG44837 -,CG5897 - chr3L 11887417 intron,3` UTR CG44837 -,CG5897 - chr3L_22_11885001 chr3L_11885001 RAL-307_125b 2068 chr3L 11903888 11903898 chr3L 11904015 11904025 5 127 0.0 0.0 0.0 5.0 137 chr3L 11903888 intron CG44837 - chr3L 11903956 intron CG44837 - chr3L 11904025 intron CG44837 - chr3L_5_11900001 chr3L_11900001 RAL-307_125b 2069 chr3L 11913095 11913163 chr3L 11913503 11913566 44 406 11.5 14.0 12.8 3.2 471 chr3L 11913095 intron CG44837 - chr3L 11913330 intron CG44837 - chr3L 11913566 intron CG44837 - chr3L_44_11910001 chr3L_11910001 RAL-307_125b 2070 chr3L 11943444 11943519 chr3L 11943595 11943670 42 150 11.5 9.5 10.5 3.7 226 chr3L 11943444 3` UTR Rpt4R + chr3L 11943557 intergenic Rpt4R +,CG5883 - chr3L 11943670 3` UTR CG5883 - chr3L_42_11940001 chr3L_11940001 RAL-307_125b 2071 chr3L 12013863 12013937 chr3L 12014003 12014078 17 137 4.5 2.5 3.5 3.8 215 chr3L 12013863 intron rols - chr3L 12013970 intron rols - chr3L 12014078 intron rols - chr3L_17_12010001 chr3L_12010001 RAL-307_125b 2072 chr3L 12022395 12022443 chr3L 12022609 12022657 11 213 7.0 7.5 7.2 1.3 262 chr3L 12022395 intron rols - chr3L 12022526 intron rols - chr3L 12022657 intron rols - chr3L_11_12020001 chr3L_12020001 RAL-307_125b 2073 chr3L 12026362 12026369 chr3L 12026487 12026498 4 128 8.5 24.0 16.2 0.2 136 chr3L 12026362 intron rols - chr3L 12026430 intron rols - chr3L 12026498 intron rols - chr3L_4_12025001 chr3L_12025001 RAL-307_125b 2074 chr3L 12041037 12041040 chr3L 12041166 12041169 5 129 0.0 9.0 4.5 0.9 132 chr3L 12041037 intron rols - chr3L 12041103 intron rols - chr3L 12041169 intron rols - chr3L_5_12040001 chr3L_12040001 RAL-307_125b 2075 chr3L 12075380 12075460 chr3L 12075519 12075569 23 134 6.0 0.0 3.0 5.8 189 chr3L 12075380 intron Sema-5c - chr3L 12075474 intron Sema-5c - chr3L 12075569 intron Sema-5c - chr3L_23_12075001 chr3L_12075001 RAL-307_125b 2076 chr3L 12089032 12089106 chr3L 12089162 12089236 37 129 5.0 10.0 7.5 4.4 204 chr3L 12089032 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089236 intergenic CG17154 + chr3L_37_12085001 chr3L_12085001 RAL-307_125b 2077 chr3L 12092349 12092387 chr3L 12092476 12092514 7 127 10.0 8.5 9.2 0.7 165 chr3L 12092349 intergenic not near genes chr3L 12092432 intergenic not near genes chr3L 12092514 intergenic not near genes chr3L_7_12090001 chr3L_12090001 RAL-307_125b 2078 chr3L 12092388 12092409 chr3L 12092473 12092536 6 120 7.5 8.0 7.8 0.7 148 chr3L 12092388 intergenic not near genes chr3L 12092462 intergenic not near genes chr3L 12092536 intergenic not near genes chr3L_6_12090001 chr3L_12090001 RAL-307_125b 2079 chr3L 12119713 12119790 chr3L 12119860 12119937 41 147 6.5 8.5 7.5 4.8 224 chr3L 12119713 3` UTR ssp + chr3L 12119825 intergenic ssp +,CG11560 + chr3L 12119937 intergenic CG11560 +,ssp + chr3L_41_12115001 chr3L_12115001 RAL-307_125b 2080 chr3L 12157132 12157191 chr3L 12158370 12158429 9 1238 68.5 51.5 60.0 0.1 1297 chr3L 12157132 3` UTR CG9760 - chr3L 12157780 3` UTR CG9760 - chr3L 12158429 intron CG9760 - chr3L_9_12155001 chr3L_12155001 RAL-307_125b 2081 chr3L 12158452 12158524 chr3L 12158722 12158795 23 267 53.0 33.0 43.0 0.5 343 chr3L 12158452 intron CG9760 - chr3L 12158624 intron CG9760 - chr3L 12158795 intron CG9760 - chr3L_23_12155001 chr3L_12155001 RAL-307_125b 2082 chr3L 12158779 12158852 chr3L 12160199 12160272 47 1430 171.0 152.5 161.8 0.3 1493 chr3L 12158779 intron CG9760 - chr3L 12159526 exon CG9760 - chr3L 12160272 intron CG9760 - chr3L_47_12155001 chr3L_12155001 RAL-307_125b 2083 chr3L 12158816 12158830 chr3L 12160273 12160279 6 1439 163.0 96.5 129.8 0.0 1463 chr3L 12158816 intron CG9760 - chr3L 12159548 exon CG9760 - chr3L 12160279 intron CG9760 - chr3L_6_12155001 chr3L_12155001 RAL-307_125b 2084 chr3L 12156445 12156454 chr3L 12160280 12160289 4 3835 76.0 90.0 83.0 0.0 3844 chr3L 12156445 3` UTR Nrx-IV + chr3L 12158367 intron CG9760 - chr3L 12160289 intron CG9760 - chr3L_4_12155001 chr3L_12155001 RAL-307_125b 2085 chr3L 12156429 12156516 chr3L 12160291 12160348 28 3845 107.5 80.0 93.8 0.3 3919 chr3L 12156429 3` UTR Nrx-IV + chr3L 12158388 intron CG9760 - chr3L 12160348 intron CG9760 - chr3L_28_12155001 chr3L_12155001 RAL-307_125b 2086 chr3L 12170743 12170818 chr3L 12170875 12170950 25 131 11.5 10.5 11.0 2.1 207 chr3L 12170743 intron Rh7 - chr3L 12170846 intron Rh7 - chr3L 12170950 intron Rh7 - chr3L_25_12170001 chr3L_12170001 RAL-307_125b 2087 chr3L 12231382 12231433 chr3L 12231631 12231703 25 253 77.5 80.5 79.0 0.3 321 chr3L 12231382 intron app - chr3L 12231542 intron app - chr3L 12231703 intron app - chr3L_25_12230001 chr3L_12230001 RAL-307_125b 2088 chr3L 12300781 12300789 chr3L 12300918 12300926 5 136 13.5 7.5 10.5 0.4 145 chr3L 12300781 intergenic CR44550 + chr3L 12300854 intergenic CR44550 + chr3L 12300926 intergenic CR44550 + chr3L_5_12300001 chr3L_12300001 RAL-307_125b 2089 chr3L 12300791 12300856 chr3L 12300917 12300983 32 136 11.0 7.5 9.2 3.1 192 chr3L 12300791 intergenic CR44550 + chr3L 12300887 intergenic CR44550 + chr3L 12300983 5` UTR CR44550 + chr3L_32_12300001 chr3L_12300001 RAL-307_125b 2090 chr3L 12301994 12302002 chr3L 12302128 12302136 4 134 0.0 12.0 6.0 0.6 142 chr3L 12301994 intergenic CR44550 +,CR44551 - chr3L 12302065 intergenic CR44551 -,CR44550 + chr3L 12302136 intergenic CR44551 -,CR44550 + chr3L_4_12300001 chr3L_12300001 RAL-307_125b 2091 chr3L 12307556 12307591 chr3L 12307686 12307721 7 130 9.5 0.0 4.8 1.2 165 chr3L 12307556 intergenic not near genes chr3L 12307638 intergenic not near genes chr3L 12307721 intergenic not near genes chr3L_7_12305001 chr3L_12305001 RAL-307_125b 2092 chr3L 12321681 12321687 chr3L 12321821 12321827 4 140 5.0 8.0 6.5 0.5 146 chr3L 12321681 intergenic not near genes chr3L 12321754 intergenic not near genes chr3L 12321827 intergenic not near genes chr3L_4_12320001 chr3L_12320001 RAL-307_125b 2093 chr3L 12369484 12369561 chr3L 12369624 12369701 36 139 5.0 10.0 7.5 4.2 217 chr3L 12369484 intron Ncc69 - chr3L 12369592 intron Ncc69 - chr3L 12369701 intron Ncc69 - chr3L_36_12365001 chr3L_12365001 RAL-307_125b 2094 chr3L 12381490 12381552 chr3L 12381618 12381680 13 122 1.0 6.5 3.8 2.7 190 chr3L 12381490 intron Ncc69 - chr3L 12381585 intron Ncc69 - chr3L 12381680 intron Ncc69 - chr3L_13_12380001 chr3L_12380001 RAL-307_125b 2095 chr3L 12515180 12515185 chr3L 12515300 12515312 5 126 14.0 8.0 11.0 0.4 132 chr3L 12515180 5` UTR tral + chr3L 12515246 5` UTR tral + chr3L 12515312 5` UTR tral + chr3L_5_12515001 chr3L_12515001 RAL-307_125b 2096 chr3L 12515187 12515226 chr3L 12515283 12515342 11 122 5.0 6.5 5.8 1.6 155 chr3L 12515187 5` UTR tral + chr3L 12515264 5` UTR tral + chr3L 12515342 5` UTR tral + chr3L_11_12515001 chr3L_12515001 RAL-307_125b 2097 chr3L 12578022 12578053 chr3L 12578145 12578185 4 133 4.5 0.0 2.2 1.2 163 chr3L 12578022 intergenic not near genes chr3L 12578104 intergenic not near genes chr3L 12578185 intergenic not near genes chr3L_4_12575001 chr3L_12575001 RAL-307_125b 2098 chr3L 12610954 12611021 chr3L 12611240 12611317 23 294 0.0 11.0 5.5 3.5 363 chr3L 12610954 intron caup + chr3L 12611136 intron caup + chr3L 12611317 intron caup + chr3L_23_12610001 chr3L_12610001 RAL-307_125b 2099 chr3L 12614559 12614597 chr3L 12614747 12614785 17 188 0.0 12.5 6.2 2.4 226 chr3L 12614559 intron caup + chr3L 12614672 intron caup + chr3L 12614785 intron caup + chr3L_17_12610001 chr3L_12610001 RAL-307_125b 2100 chr3L 12626119 12626125 chr3L 12626278 12626284 4 159 21.5 0.0 10.8 0.3 165 chr3L 12626119 intergenic not near genes chr3L 12626202 intergenic not near genes chr3L 12626284 intergenic not near genes chr3L_4_12625001 chr3L_12625001 RAL-307_125b 2101 chr3L 12626133 12626166 chr3L 12626271 12626325 23 156 3.5 0.0 1.8 8.2 192 chr3L 12626133 intergenic not near genes chr3L 12626229 intergenic not near genes chr3L 12626325 intergenic not near genes chr3L_23_12625001 chr3L_12625001 RAL-307_125b 2102 chr3L 12647902 12647961 chr3L 12648028 12648087 15 122 6.0 0.0 3.0 3.8 185 chr3L 12647902 5` UTR CR32111 + chr3L 12647994 5` UTR CR32111 + chr3L 12648087 5` UTR CR32111 + chr3L_15_12645001 chr3L_12645001 RAL-307_125b 2103 chr3L 12681646 12681717 chr3L 12682049 12682099 20 399 6.0 9.0 7.5 2.4 453 chr3L 12681646 intergenic not near genes chr3L 12681872 intergenic not near genes chr3L 12682099 intergenic not near genes chr3L_20_12680001 chr3L_12680001 RAL-307_125b 2104 chr3L 12722248 12722308 chr3L 12722380 12722433 9 131 3.0 3.5 3.2 2.1 185 chr3L 12722248 intergenic not near genes chr3L 12722340 intergenic not near genes chr3L 12722433 intergenic not near genes chr3L_9_12720001 chr3L_12720001 RAL-307_125b 2105 chr3L 12727986 12728041 chr3L 12728120 12728175 19 134 14.0 17.0 15.5 1.2 189 chr3L 12727986 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728175 intergenic not near genes chr3L_19_12725001 chr3L_12725001 RAL-307_125b 2106 chr3L 12788368 12788442 chr3L 12788538 12788612 31 163 11.5 7.0 9.2 3.0 244 chr3L 12788368 exon Atg1 - chr3L 12788490 intron Atg1 - chr3L 12788612 exon Atg1 - chr3L_31_12785001 chr3L_12785001 RAL-307_125b 2107 chr3L 12801940 12801954 chr3L 12802065 12802080 6 126 22.0 7.0 14.5 0.4 140 chr3L 12801940 intron Atg1 - chr3L 12802010 intron Atg1 - chr3L 12802080 intron Atg1 - chr3L_6_12800001 chr3L_12800001 RAL-307_125b 2108 chr3L 12801958 12802008 chr3L 12802064 12802134 26 121 6.0 6.5 6.2 3.6 176 chr3L 12801958 intron Atg1 - chr3L 12802046 intron Atg1 - chr3L 12802134 intron Atg1 - chr3L_26_12800001 chr3L_12800001 RAL-307_125b 2109 chr3L 12857950 12857998 chr3L 12858095 12858143 27 145 13.0 5.0 9.0 2.7 193 chr3L 12857950 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858143 3` UTR CG32107 - chr3L_27_12855001 chr3L_12855001 RAL-307_125b 2110 chr3L 12867506 12867516 chr3L 12867649 12867659 7 143 23.5 0.5 12.0 0.5 153 chr3L 12867506 intergenic not near genes chr3L 12867582 intergenic not near genes chr3L 12867659 intergenic not near genes chr3L_7_12865001 chr3L_12865001 RAL-307_125b 2111 chr3L 12867518 12867531 chr3L 12867645 12867674 9 141 18.5 0.5 9.5 0.9 156 chr3L 12867518 intergenic not near genes chr3L 12867596 intergenic not near genes chr3L 12867674 intergenic not near genes chr3L_9_12865001 chr3L_12865001 RAL-307_125b 2112 chr3L 12867533 12867569 chr3L 12867641 12867696 10 136 12.5 0.5 6.5 1.3 163 chr3L 12867533 intergenic not near genes chr3L 12867614 intergenic not near genes chr3L 12867696 intergenic not near genes chr3L_10_12865001 chr3L_12865001 RAL-307_125b 2113 chr3L 12874877 12874954 chr3L 12877219 12877296 jockey 37 2339 7.0 8.5 7.8 4.2 2419 chr3L 12874877 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877296 intergenic not near genes chr3L_37_12875001 chr3L_12875001 RAL-307_125b 2114 chr3L 12892874 12892892 chr3L 12893030 12893048 6 156 6.5 4.5 5.5 0.9 174 chr3L 12892874 intron CG14118 + chr3L 12892961 intron CG14118 + chr3L 12893048 intron CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-307_125b 2115 chr3L 12894763 12894799 chr3L 12894891 12894927 11 128 14.5 7.0 10.8 0.9 164 chr3L 12894763 intergenic CG14118 + chr3L 12894845 intergenic CG14118 + chr3L 12894927 intergenic CG14118 + chr3L_11_12890001 chr3L_12890001 RAL-307_125b 2116 chr3L 12919260 12919309 chr3L 12924760 12924845 Rt1c 9 5513 5.5 4.0 4.8 1.6 5585 chr3L 12919260 intergenic not near genes chr3L 12922052 intergenic not near genes chr3L 12924845 intergenic not near genes chr3L_9_12920001 chr3L_12920001 RAL-307_125b 2117 chr3L 12955087 12955157 chr3L 12955213 12955278 13 124 11.0 12.0 11.5 1.0 191 chr3L 12955087 intergenic CG10752 - chr3L 12955182 intergenic not near genes chr3L 12955278 intergenic not near genes chr3L_13_12955001 chr3L_12955001 RAL-307_125b 2118 chr3L 12957741 12957812 chr3L 12962273 12962344 copia 32 4529 11.0 13.0 12.0 2.5 4603 chr3L 12957741 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962344 intergenic not near genes chr3L_32_12960001 chr3L_12960001 RAL-307_125b 2119 chr3L 12978721 12978792 chr3L 12978839 12978855 16 119 9.0 2.0 5.5 2.5 134 chr3L 12978721 intergenic not near genes chr3L 12978788 intergenic not near genes chr3L 12978855 intergenic not near genes chr3L_16_12975001 chr3L_12975001 RAL-307_125b 2120 chr3L 12980470 12980531 chr3L 12980608 12980674 9 140 10.0 0.0 5.0 1.5 204 chr3L 12980470 intergenic not near genes chr3L 12980572 intergenic not near genes chr3L 12980674 intergenic not near genes chr3L_9_12980001 chr3L_12980001 RAL-307_125b 2121 chr3L 12998027 12998102 chr3L 12998381 12998456 44 353 7.0 7.0 7.0 5.5 429 chr3L 12998027 intergenic not near genes chr3L 12998242 intergenic not near genes chr3L 12998456 intergenic not near genes chr3L_44_12995001 chr3L_12995001 RAL-307_125b 2122 chr3L 13007653 13007921 chr3L 13007771 13008070 41 131 13.0 6.5 9.8 3.8 417 chr3L 13007653 exon CG11263 + chr3L 13007862 3` UTR CG11263 + chr3L 13008070 intergenic CG11263 +,CG14117 + chr3L_41_13005001 chr3L_13005001 RAL-307_125b 2123 chr3L 13007924 13007954 chr3L 13008061 13008103 13 143 6.5 15.0 10.8 1.1 179 chr3L 13007924 intergenic CG11263 +,CG14117 + chr3L 13008014 intergenic CG11263 +,CG14117 + chr3L 13008103 intergenic CG14117 +,CG11263 + chr3L_13_13005001 chr3L_13005001 RAL-307_125b 2124 chr3L 13067493 13067573 chr3L 13067619 13067699 19 125 7.5 4.0 5.8 2.8 206 chr3L 13067493 intergenic not near genes chr3L 13067596 intergenic not near genes chr3L 13067699 intergenic not near genes chr3L_19_13065001 chr3L_13065001 RAL-307_125b 2125 chr3L 13260028 13260088 chr3L 13260239 13260299 13 205 2.5 9.5 6.0 1.9 271 chr3L 13260028 intron caps + chr3L 13260164 intron caps + chr3L 13260299 intron caps + chr3L_13_13260001 chr3L_13260001 RAL-307_125b 2126 chr3L 13267240 13267314 chr3L 13267403 13267455 7 159 6.5 0.0 3.2 1.7 215 chr3L 13267240 intron caps + chr3L 13267348 intron caps + chr3L 13267455 intron caps + chr3L_7_13265001 chr3L_13265001 RAL-307_125b 2127 chr3L 13310992 13311049 chr3L 13311098 13311098 30 115 14.0 13.0 13.5 2.1 106 chr3L 13310992 intergenic not near genes chr3L 13311045 intergenic not near genes chr3L 13311098 intergenic not near genes chr3L_30_13310001 chr3L_13310001 RAL-307_125b 2128 chr3L 13315808 13315865 chr3L 13315945 13316002 15 136 6.0 2.5 4.2 2.9 194 chr3L 13315808 intergenic not near genes chr3L 13315905 intergenic not near genes chr3L 13316002 intergenic not near genes chr3L_15_13315001 chr3L_13315001 RAL-307_125b 2129 chr3L 13361913 13361988 chr3L 13362057 13362082 39 138 7.5 4.5 6.0 5.6 169 chr3L 13361913 intergenic not near genes chr3L 13361998 intergenic not near genes chr3L 13362082 intergenic not near genes chr3L_39_13360001 chr3L_13360001 RAL-307_125b 2130 chr3L 13365005 13365018 chr3L 13365133 13365146 4 128 12.5 0.5 6.5 0.5 141 chr3L 13365005 intergenic not near genes chr3L 13365076 intergenic not near genes chr3L 13365146 intergenic not near genes chr3L_4_13365001 chr3L_13365001 RAL-307_125b 2131 chr3L 13374203 13374259 chr3L 13374342 13374398 28 137 16.5 6.0 11.2 2.3 195 chr3L 13374203 intergenic not near genes chr3L 13374300 intergenic not near genes chr3L 13374398 intergenic not near genes chr3L_28_13370001 chr3L_13370001 RAL-307_125b 2132 chr3L 13379642 13379647 chr3L 13379862 13379867 4 220 12.5 0.5 6.5 0.5 225 chr3L 13379642 intron CG14111 + chr3L 13379754 intron CG14111 + chr3L 13379867 intron CG14111 + chr3L_4_13375001 chr3L_13375001 RAL-307_125b 2133 chr3L 13379674 13379679 chr3L 13379893 13379898 5 219 8.0 9.0 8.5 0.5 224 chr3L 13379674 intron CG14111 + chr3L 13379786 intron CG14111 + chr3L 13379898 intron CG14111 + chr3L_5_13375001 chr3L_13375001 RAL-307_125b 2134 chr3L 13396016 13396072 chr3L 13396143 13396171 9 123 16.5 0.5 8.5 0.9 155 chr3L 13396016 intergenic sens - chr3L 13396094 intergenic sens - chr3L 13396171 intergenic sens - chr3L_9_13395001 chr3L_13395001 RAL-307_125b 2135 chr3L 13452635 13452685 chr3L 13452773 13452823 25 136 0.5 19.0 9.8 2.3 188 chr3L 13452635 intron CG10738 + chr3L 13452729 intron CG10738 + chr3L 13452823 intron CG10738 + chr3L_25_13450001 chr3L_13450001 RAL-307_125b 2136 chr3L 13455704 13455784 chr3L 13455909 13455961 35 200 8.0 9.0 8.5 3.7 257 chr3L 13455704 intron CG10738 + chr3L 13455832 intron CG10738 + chr3L 13455961 intron CG10738 + chr3L_35_13455001 chr3L_13455001 RAL-307_125b 2137 chr3L 13525126 13525181 chr3L 13532962 13533022 roo 32 7842 14.5 14.5 14.5 2.1 7896 chr3L 13525126 intergenic not near genes chr3L 13529074 intergenic not near genes chr3L 13533022 intergenic not near genes chr3L_32_13525001 chr3L_13525001 RAL-307_125b 2138 chr3L 13535867 13535928 chr3L 13535993 13536054 5 124 11.5 14.0 12.8 0.4 187 chr3L 13535867 intergenic not near genes chr3L 13535960 intergenic not near genes chr3L 13536054 intergenic not near genes chr3L_5_13535001 chr3L_13535001 RAL-307_125b 2139 chr3L 13559928 13559971 chr3L 13560054 13560107 21 132 10.5 12.5 11.5 1.7 179 chr3L 13559928 intron bru-3 - chr3L 13560018 intron bru-3 - chr3L 13560107 intron bru-3 - chr3L_21_13560001 chr3L_13560001 RAL-307_125b 2140 chr3L 13559976 13559983 chr3L 13560046 13560119 5 123 8.0 10.0 9.0 0.5 143 chr3L 13559976 intron bru-3 - chr3L 13560048 intron bru-3 - chr3L 13560119 intron bru-3 - chr3L_5_13560001 chr3L_13560001 RAL-307_125b 2141 chr3L 13598164 13598190 chr3L 13598291 13598292 6 122 14.0 2.0 8.0 0.7 128 chr3L 13598164 intron bru-3 - chr3L 13598228 intron bru-3 - chr3L 13598292 intron bru-3 - chr3L_6_13595001 chr3L_13595001 RAL-307_125b 2142 chr3L 13610153 13610226 chr3L 13610300 13610373 26 146 12.0 9.0 10.5 2.3 220 chr3L 13610153 intron bru-3 - chr3L 13610263 intron bru-3 - chr3L 13610373 intron bru-3 - chr3L_26_13610001 chr3L_13610001 RAL-307_125b 2143 chr3L 13739983 13740051 chr3L 13740125 13740174 14 133 6.0 11.0 8.5 1.5 191 chr3L 13739983 intron bru-3 - chr3L 13740078 intron bru-3 - chr3L 13740174 intron bru-3 - chr3L_14_13740001 chr3L_13740001 RAL-307_125b 2144 chr3L 13745242 13745288 chr3L 13745381 13745427 15 136 6.0 2.5 4.2 2.9 185 chr3L 13745242 intron bru-3 - chr3L 13745334 intron bru-3 - chr3L 13745427 intron bru-3 - chr3L_15_13745001 chr3L_13745001 RAL-307_125b 2145 chr3L 13768939 13769029 chr3L 13769085 13769165 22 136 0.0 4.0 2.0 7.3 226 chr3L 13768939 intron bru-3 - chr3L 13769052 intron bru-3 - chr3L 13769165 intron bru-3 - chr3L_22_13765001 chr3L_13765001 RAL-307_125b 2146 chr3L 13804501 13804546 chr3L 13822836 13822882 roo 21 18334 11.5 11.5 11.5 1.7 18381 chr3L 13804501 intergenic not near genes chr3L 13813692 intergenic not near genes chr3L 13822882 intergenic not near genes chr3L_21_13810001 chr3L_13810001 RAL-307_125b 2147 chr3L 13804548 13804561 chr3L 13822884 13822889 roo 4 18332 8.0 23.0 15.5 0.2 18341 chr3L 13804548 intergenic not near genes chr3L 13813718 intergenic not near genes chr3L 13822889 intergenic not near genes chr3L_4_13810001 chr3L_13810001 RAL-307_125b 2148 chr3L 13823817 13823890 chr3L 13824036 13824109 42 217 5.5 12.0 8.8 4.3 292 chr3L 13823817 intergenic not near genes chr3L 13823963 intergenic not near genes chr3L 13824109 intergenic not near genes chr3L_42_13820001 chr3L_13820001 RAL-307_125b 2149 chr3L 13828637 13828720 chr3L 13828763 13828800 33 123 10.5 8.5 9.5 3.1 163 chr3L 13828637 intergenic not near genes chr3L 13828718 intergenic not near genes chr3L 13828800 intergenic not near genes chr3L_33_13825001 chr3L_13825001 RAL-307_125b 2150 chr3L 13841106 13841161 chr3L 13841243 13841288 20 135 6.0 8.0 7.0 2.5 182 chr3L 13841106 3` UTR CG8757 - chr3L 13841197 3` UTR CG8757 - chr3L 13841288 exon CG8757 - chr3L_20_13840001 chr3L_13840001 RAL-307_125b 2151 chr3L 13884333 13884384 chr3L 13884474 13884525 6 141 9.0 10.5 9.8 0.6 192 chr3L 13884333 intron dysc - chr3L 13884429 intron dysc - chr3L 13884525 intron dysc - chr3L_6_13880001 chr3L_13880001 RAL-307_125b 2152 chr3L 5921645 5921677 chr3L 13915288 13915290 4 7993620 39.0 45.5 42.2 0.1 7993645 chr3L 5921645 intergenic CG10483 -,CG32407 + chr3L 9918468 intron CG34356 + chr3L 13915290 intron Rgl - chr3L_4_9915001 chr3L_9915001 RAL-307_125b 2153 chr3L 13954424 13954450 chr3L 13954553 13954579 6 129 11.5 9.5 10.5 0.5 155 chr3L 13954424 intron CG32137 + chr3L 13954502 intron CG32137 + chr3L 13954579 intron CG32137 + chr3L_6_13950001 chr3L_13950001 RAL-307_125b 2154 chr3L 13993961 13994015 chr3L 13994091 13994146 19 131 5.5 8.5 7.0 2.4 185 chr3L 13993961 intergenic 26-29-p + chr3L 13994054 intergenic 26-29-p + chr3L 13994146 intergenic 26-29-p + chr3L_19_13990001 chr3L_13990001 RAL-307_125b 2155 chr3L 14090598 14090667 chr3L 14090769 14090823 7 158 0.0 4.0 2.0 2.3 225 chr3L 14090598 intergenic not near genes chr3L 14090710 intergenic not near genes chr3L 14090823 intergenic not near genes chr3L_7_14090001 chr3L_14090001 RAL-307_125b 2156 chr3L 14092688 14092758 chr3L 14092821 14092891 12 133 4.5 6.0 5.2 1.9 203 chr3L 14092688 intergenic not near genes chr3L 14092790 intergenic not near genes chr3L 14092891 intergenic not near genes chr3L_12_14090001 chr3L_14090001 RAL-307_125b 2157 chr3L 14136806 14136852 chr3L 14136977 14137024 7 172 1.0 9.5 5.2 1.1 218 chr3L 14136806 intergenic not near genes chr3L 14136915 intergenic not near genes chr3L 14137024 intergenic not near genes chr3L_7_14135001 chr3L_14135001 RAL-307_125b 2158 chr3L 14174068 14174088 chr3L 14174193 14174214 11 126 24.0 14.5 19.2 0.5 146 chr3L 14174068 intergenic not near genes chr3L 14174141 intergenic not near genes chr3L 14174214 intergenic not near genes chr3L_11_14170001 chr3L_14170001 RAL-307_125b 2159 chr3L 14185127 14185140 chr3L 14185253 14185266 4 126 17.5 6.5 12.0 0.3 139 chr3L 14185127 intergenic not near genes chr3L 14185196 intergenic not near genes chr3L 14185266 intergenic not near genes chr3L_4_14185001 chr3L_14185001 RAL-307_125b 2160 chr3L 14185142 14185186 chr3L 14185233 14185312 20 120 6.0 5.0 5.5 3.1 170 chr3L 14185142 intergenic not near genes chr3L 14185227 intergenic not near genes chr3L 14185312 intergenic not near genes chr3L_20_14185001 chr3L_14185001 RAL-307_125b 2161 chr3L 14194679 14194738 chr3L 14194805 14194864 34 126 10.5 1.0 5.8 5.0 185 chr3L 14194679 intron nuf + chr3L 14194772 intron nuf + chr3L 14194864 intron nuf + chr3L_34_14190001 chr3L_14190001 RAL-307_125b 2162 chr3L 14196363 14196444 chr3L 14196498 14196579 28 132 6.5 7.0 6.8 3.6 216 chr3L 14196363 intron nuf + chr3L 14196471 intron nuf + chr3L 14196579 intron nuf + chr3L_28_14195001 chr3L_14195001 RAL-307_125b 2163 chr3L 14234830 14234854 chr3L 14234958 14234982 6 128 15.5 8.0 11.8 0.5 152 chr3L 14234830 intergenic CG7924 +,CG34244 - chr3L 14234906 intergenic CG34244 -,CG7924 + chr3L 14234982 intergenic CG34244 -,CG7924 + chr3L_6_14230001 chr3L_14230001 RAL-307_125b 2164 chr3L 14239943 14240006 chr3L 14240085 14240153 25 143 6.0 10.0 8.0 2.8 210 chr3L 14239943 intergenic not near genes chr3L 14240048 intergenic not near genes chr3L 14240153 intergenic not near genes chr3L_25_14240001 chr3L_14240001 RAL-307_125b 2165 chr3L 14245527 14245593 chr3L 14245671 14245737 1360 21 139 5.5 9.5 7.5 2.5 210 chr3L 14245527 3` UTR CR44561 - chr3L 14245632 3` UTR CR44561 - chr3L 14245737 intergenic CR44561 -,CR44560 + chr3L_21_14245001 chr3L_14245001 RAL-307_125b 2166 chr3L 14267363 14267393 chr3L 14271824 14271837 F-element 7 4455 8.5 0.0 4.2 1.3 4474 chr3L 14267363 intergenic not near genes chr3L 14269600 intergenic not near genes chr3L 14271837 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-307_125b 2167 chr3L 14295942 14296006 chr3L 14296478 14296542 roo 15 535 2.5 10.5 6.5 2.0 600 chr3L 14295942 intron fz + chr3L 14296242 intron fz + chr3L 14296542 intron fz + chr3L_15_14295001 chr3L_14295001 RAL-307_125b 2168 chr3L 14341402 14341409 chr3L 14341577 14341593 6 183 1.0 14.5 7.8 0.7 191 chr3L 14341402 intron fz + chr3L 14341498 intron fz + chr3L 14341593 intron fz + chr3L_6_14340001 chr3L_14340001 RAL-307_125b 2169 chr3L 14341411 14341439 chr3L 14341576 14341622 15 181 1.0 14.5 7.8 1.7 211 chr3L 14341411 intron fz + chr3L 14341516 intron fz + chr3L 14341622 intron fz + chr3L_15_14340001 chr3L_14340001 RAL-307_125b 2170 chr3L 14356477 14356493 chr3L 14356607 14356623 7 130 18.5 6.5 12.5 0.5 146 chr3L 14356477 intron fz + chr3L 14356550 intron fz + chr3L 14356623 intron fz + chr3L_7_14355001 chr3L_14355001 RAL-307_125b 2171 chr3L 14356494 14356536 chr3L 14356606 14356666 12 123 9.0 6.5 7.8 1.4 172 chr3L 14356494 intron fz + chr3L 14356580 intron fz + chr3L 14356666 intron fz + chr3L_12_14355001 chr3L_14355001 RAL-307_125b 2172 chr3L 14399128 14399142 chr3L 14399267 14399281 8 139 33.5 0.0 16.8 0.4 153 chr3L 14399128 intergenic not near genes chr3L 14399204 intergenic not near genes chr3L 14399281 intergenic not near genes chr3L_8_14395001 chr3L_14395001 RAL-307_125b 2173 chr3L 14411819 14411839 chr3L 14411948 14411968 9 128 13.0 10.0 11.5 0.7 149 chr3L 14411819 intron CG3919 + chr3L 14411894 intron CG3919 + chr3L 14411968 intron CG3919 + chr3L_9_14410001 chr3L_14410001 RAL-307_125b 2174 chr3L 14411844 14411886 chr3L 14411947 14412015 14 124 6.5 9.5 8.0 1.6 171 chr3L 14411844 intron CG3919 + chr3L 14411930 intron CG3919 + chr3L 14412015 intron CG3919 + chr3L_14_14410001 chr3L_14410001 RAL-307_125b 2175 chr3L 14437836 14437905 chr3L 14437980 14438049 30 141 13.0 9.0 11.0 2.5 213 chr3L 14437836 intron bbg - chr3L 14437942 intron bbg - chr3L 14438049 intron bbg - chr3L_30_14435001 chr3L_14435001 RAL-307_125b 2176 chr3L 14462835 14462900 chr3L 14462972 14463038 13 138 6.0 9.5 7.8 1.5 203 chr3L 14462835 intron bbg - chr3L 14462936 intron bbg - chr3L 14463038 intron bbg - chr3L_13_14460001 chr3L_14460001 RAL-307_125b 2177 chr3L 14468411 14468461 chr3L 14473667 14473717 copia 25 5256 13.5 11.5 12.5 1.9 5306 chr3L 14468411 intron bbg - chr3L 14471064 intron bbg - chr3L 14473717 intron bbg - chr3L_25_14470001 chr3L_14470001 RAL-307_125b 2178 chr3L 14485971 14485997 chr3L 14486102 14486128 16 131 19.5 11.5 15.5 1.0 157 chr3L 14485971 intron bbg - chr3L 14486050 intron bbg - chr3L 14486128 intron bbg - chr3L_16_14485001 chr3L_14485001 RAL-307_125b 2179 chr3L 14486003 14486038 chr3L 14486101 14486169 17 126 11.5 11.0 11.2 1.4 166 chr3L 14486003 intron bbg - chr3L 14486086 intron bbg - chr3L 14486169 intron bbg - chr3L_17_14485001 chr3L_14485001 RAL-307_125b 2180 chr3L 14522060 14522127 chr3L 14522202 14522276 31 146 9.5 13.0 11.2 2.5 216 chr3L 14522060 intron bbg - chr3L 14522168 intron bbg - chr3L 14522276 intron bbg - chr3L_31_14520001 chr3L_14520001 RAL-307_125b 2181 chr3L 14524291 14524327 chr3L 14529096 14529134 F-element 7 4805 6.5 2.5 4.5 1.3 4843 chr3L 14524291 intron bbg - chr3L 14526712 intron bbg - chr3L 14529134 intron bbg - chr3L_7_14525001 chr3L_14525001 RAL-307_125b 2182 chr3L 14546767 14546816 chr3L 14546913 14546967 10 150 0.0 9.0 4.5 1.8 200 chr3L 14546767 intron CG9238 - chr3L 14546867 intron CG9238 - chr3L 14546967 intron CG9238 - chr3L_10_14545001 chr3L_14545001 RAL-307_125b 2183 chr3L 14576172 14576190 chr3L 14576302 14576355 9 171 1.0 12.5 6.8 1.2 183 chr3L 14576172 intergenic not near genes chr3L 14576264 intergenic not near genes chr3L 14576355 intergenic not near genes chr3L_9_14575001 chr3L_14575001 RAL-307_125b 2184 chr3L 14602926 14603082 chr3L 14603064 14603209 22 128 0.0 0.0 0.0 22.0 283 chr3L 14602926 intergenic not near genes chr3L 14603068 intergenic not near genes chr3L 14603209 intergenic not near genes chr3L_22_14600001 chr3L_14600001 RAL-307_125b 2185 chr3L 14652595 14652661 chr3L 14652724 14652790 36 125 7.0 9.5 8.2 3.9 195 chr3L 14652595 intron dlp + chr3L 14652692 intron dlp + chr3L 14652790 intron dlp + chr3L_36_14650001 chr3L_14650001 RAL-307_125b 2186 chr3L 14714651 14714664 chr3L 14714780 14714792 6 129 21.5 10.5 16.0 0.4 141 chr3L 14714651 intron ome + chr3L 14714722 intron ome + chr3L 14714792 intron ome + chr3L_6_14710001 chr3L_14710001 RAL-307_125b 2187 chr3L 14714667 14714716 chr3L 14714768 14714828 23 125 6.0 10.0 8.0 2.6 161 chr3L 14714667 intron ome + chr3L 14714748 intron ome + chr3L 14714828 intron ome + chr3L_23_14710001 chr3L_14710001 RAL-307_125b 2188 chr3L 14721172 14721188 chr3L 14723061 14723076 Rt1c 5 1887 9.0 11.5 10.2 0.4 1904 chr3L 14721172 intron ome + chr3L 14722124 intron ome + chr3L 14723076 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-307_125b 2189 chr3L 14725568 14725576 chr3L 14728612 14728620 Doc 4 3044 18.5 14.5 16.5 0.2 3052 chr3L 14725568 intron ome + chr3L 14727094 intron ome + chr3L 14728620 intron ome + chr3L_4_14725001 chr3L_14725001 RAL-307_125b 2190 chr3L 14725577 14725616 chr3L 14728611 14728651 Doc 16 3036 11.0 14.0 12.5 1.2 3074 chr3L 14725577 intron ome + chr3L 14727114 intron ome + chr3L 14728651 intron ome + chr3L_16_14725001 chr3L_14725001 RAL-307_125b 2191 chr3L 14913857 14913873 chr3L 14913984 14914000 9 126 14.5 13.5 14.0 0.6 143 chr3L 14913857 intron DCX-EMAP + chr3L 14913928 intron DCX-EMAP + chr3L 14914000 intron DCX-EMAP + chr3L_9_14910001 chr3L_14910001 RAL-307_125b 2192 chr3L 14913874 14913927 chr3L 14913982 14914052 21 122 6.5 14.0 10.2 1.9 178 chr3L 14913874 intron DCX-EMAP + chr3L 14913963 intron DCX-EMAP + chr3L 14914052 intron DCX-EMAP + chr3L_21_14910001 chr3L_14910001 RAL-307_125b 2193 chr3L 14970715 14970759 chr3L 14971076 14971120 F-element 17 361 8.5 3.0 5.8 2.5 405 chr3L 14970715 intergenic Tom + chr3L 14970918 intergenic not near genes chr3L 14971120 intergenic not near genes chr3L_17_14970001 chr3L_14970001 RAL-307_125b 2194 chr3L 14974729 14974801 chr3L 14974865 14974918 32 130 8.0 6.5 7.2 3.9 189 chr3L 14974729 intergenic Ocho + chr3L 14974824 intergenic Ocho + chr3L 14974918 5` UTR Ocho + chr3L_32_14970001 chr3L_14970001 RAL-307_125b 2195 chr3L 14995878 14995885 chr3L 14996029 14996036 5 151 26.5 11.5 19.0 0.2 158 chr3L 14995878 intron Zip71B + chr3L 14995957 intron Zip71B + chr3L 14996036 intron Zip71B + chr3L_5_14995001 chr3L_14995001 RAL-307_125b 2196 chr3L 14995886 14995941 chr3L 14996021 14996071 31 146 8.0 10.0 9.0 3.1 185 chr3L 14995886 intron Zip71B + chr3L 14995978 intron Zip71B + chr3L 14996071 intron Zip71B + chr3L_31_14995001 chr3L_14995001 RAL-307_125b 2197 chr3L 15026652 15026662 chr3L 15026778 15026788 6 126 0.5 3.0 1.8 2.1 136 chr3L 15026652 intron Sytbeta - chr3L 15026720 intron Sytbeta - chr3L 15026788 intron Sytbeta - chr3L_6_15025001 chr3L_15025001 RAL-307_125b 2198 chr3L 15037385 15037397 chr3L 15037521 15037533 12 136 20.0 0.0 10.0 1.1 148 chr3L 15037385 intron Sytbeta - chr3L 15037459 intron Sytbeta - chr3L 15037533 intron Sytbeta - chr3L_12_15035001 chr3L_15035001 RAL-307_125b 2199 chr3L 15037416 15037457 chr3L 15037511 15037592 9 130 7.0 0.0 3.5 2.0 176 chr3L 15037416 intron Sytbeta - chr3L 15037504 intron Sytbeta - chr3L 15037592 intron Sytbeta - chr3L_9_15035001 chr3L_15035001 RAL-307_125b 2200 chr3L 15084727 15084731 chr3L 15084857 15084861 4 130 10.0 14.5 12.2 0.3 134 chr3L 15084727 intron cp309 - chr3L 15084794 intron cp309 - chr3L 15084861 intron cp309 - chr3L_4_15080001 chr3L_15080001 RAL-307_125b 2201 chr3L 15085005 15085010 chr3L 15086221 15086226 1360 4 1216 23.0 8.5 15.8 0.2 1221 chr3L 15085005 intron cp309 - chr3L 15085616 intron cp309 - chr3L 15086226 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-307_125b 2202 chr3L 15085014 15085076 chr3L 15086215 15086271 1360 29 1214 8.5 8.5 8.5 3.1 1257 chr3L 15085014 intron cp309 - chr3L 15085642 intron cp309 - chr3L 15086271 intron cp309 - chr3L_29_15085001 chr3L_15085001 RAL-307_125b 2203 chr3L 15088021 15088024 chr3L 15090825 15090828 5 2804 11.0 26.0 18.5 0.3 2807 chr3L 15088021 intron cp309 - chr3L 15089424 intron cp309 - chr3L 15090828 intron,3` UTR cp309 -,CG6945 - chr3L_5_15085001 chr3L_15085001 RAL-307_125b 2204 chr3L 15094925 15094964 chr3L 15095070 15095109 8 144 9.0 6.5 7.8 0.9 184 chr3L 15094925 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095017 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095109 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_8_15095001 chr3L_15095001 RAL-307_125b 2205 chr3L 15146113 15146172 chr3L 15146240 15146311 25 129 1.0 14.5 7.8 2.8 198 chr3L 15146113 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146311 3` UTR Pex3 + chr3L_25_15145001 chr3L_15145001 RAL-307_125b 2206 chr3L 15164990 15164999 chr3L 15165138 15165147 6 148 12.5 0.0 6.2 0.8 157 chr3L 15164990 intergenic not near genes chr3L 15165068 intergenic not near genes chr3L 15165147 intergenic not near genes chr3L_6_15165001 chr3L_15165001 RAL-307_125b 2207 chr3L 15170749 15170823 chr3L 15170948 15171014 13 193 2.5 1.5 2.0 4.3 265 chr3L 15170749 intergenic not near genes chr3L 15170882 intergenic not near genes chr3L 15171014 intergenic not near genes chr3L_13_15170001 chr3L_15170001 RAL-307_125b 2208 chr3L 15192303 15192368 chr3L 15192781 15192846 38 476 9.0 9.0 9.0 3.8 543 chr3L 15192303 intergenic not near genes chr3L 15192574 intergenic not near genes chr3L 15192846 intergenic not near genes chr3L_38_15190001 chr3L_15190001 RAL-307_125b 2209 chr3L 15257383 15257444 chr3L 15257646 15257707 22 263 6.0 3.5 4.8 3.8 324 chr3L 15257383 intergenic not near genes chr3L 15257545 intergenic not near genes chr3L 15257707 intergenic not near genes chr3L_22_15255001 chr3L_15255001 RAL-307_125b 2210 chr3L 15295730 15295751 chr3L 15298623 15298644 gypsy5 16 2892 22.5 15.5 19.0 0.8 2914 chr3L 15295730 intergenic not near genes chr3L 15297187 intergenic not near genes chr3L 15298644 intergenic Best4 + chr3L_16_15295001 chr3L_15295001 RAL-307_125b 2211 chr3L 15295752 15295793 chr3L 15298618 15298686 gypsy5 23 2891 13.0 12.5 12.8 1.7 2934 chr3L 15295752 intergenic not near genes chr3L 15297219 intergenic not near genes chr3L 15298686 intergenic Best4 + chr3L_23_15295001 chr3L_15295001 RAL-307_125b 2212 chr3L 15329324 15329395 chr3L 15329464 15329535 34 137 9.0 12.0 10.5 3.0 211 chr3L 15329324 intergenic not near genes chr3L 15329430 intergenic not near genes chr3L 15329535 intergenic not near genes chr3L_34_15325001 chr3L_15325001 RAL-307_125b 2213 chr3L 15349561 15349631 chr3L 15349840 15349910 21 277 8.0 4.0 6.0 3.0 349 chr3L 15349561 intergenic not near genes chr3L 15349736 intergenic not near genes chr3L 15349910 intergenic not near genes chr3L_21_15345001 chr3L_15345001 RAL-307_125b 2214 chr3L 15366659 15366689 chr3L 15366822 15366844 6 160 7.5 20.5 14.0 0.4 185 chr3L 15366659 intergenic not near genes chr3L 15366752 intergenic not near genes chr3L 15366844 intergenic not near genes chr3L_6_15365001 chr3L_15365001 RAL-307_125b 2215 chr3L 15405977 15406054 chr3L 15406109 15406154 33 127 7.0 8.5 7.8 3.7 177 chr3L 15405977 intergenic not near genes chr3L 15406066 intergenic not near genes chr3L 15406154 intergenic not near genes chr3L_33_15405001 chr3L_15405001 RAL-307_125b 2216 chr3L 15423716 15423779 chr3L 15426610 15426673 opus 14 2892 5.0 3.5 4.2 2.7 2957 chr3L 15423716 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426673 intergenic not near genes chr3L_14_15425001 chr3L_15425001 RAL-307_125b 2217 chr3L 15444609 15444660 chr3L 15444753 15444790 19 141 13.0 9.0 11.0 1.6 181 chr3L 15444609 intergenic not near genes chr3L 15444700 intergenic not near genes chr3L 15444790 intergenic not near genes chr3L_19_15440001 chr3L_15440001 RAL-307_125b 2218 chr3L 15444664 15444685 chr3L 15444752 15444804 13 133 9.5 9.0 9.2 1.3 140 chr3L 15444664 intergenic not near genes chr3L 15444734 intergenic not near genes chr3L 15444804 intergenic not near genes chr3L_13_15440001 chr3L_15440001 RAL-307_125b 2219 chr3L 10345587 10345588 chr3L 15447098 15447100 4 5101511 16.5 33.0 24.8 0.2 5101513 chr3L 10345587 intergenic not near genes chr3L 12896344 intergenic not near genes chr3L 15447100 intergenic not near genes chr3L_4_12895001 chr3L_12895001 RAL-307_125b 2220 chr3L 15465990 15466135 chr3L 15466122 15466281 20 147 0.0 0.0 0.0 20.0 291 chr3L 15465990 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466281 intergenic not near genes chr3L_20_15465001 chr3L_15465001 RAL-307_125b 2221 chr3L 15466473 15466549 chr3L 15466607 15466636 30 131 2.0 9.0 5.5 4.6 163 chr3L 15466473 intergenic not near genes chr3L 15466554 intergenic not near genes chr3L 15466636 intergenic not near genes chr3L_30_15465001 chr3L_15465001 RAL-307_125b 2222 chr3L 15470944 15470977 chr3L 15471064 15471098 9 120 18.5 15.0 16.8 0.5 154 chr3L 15470944 intergenic not near genes chr3L 15471021 intergenic not near genes chr3L 15471098 intergenic not near genes chr3L_9_15470001 chr3L_15470001 RAL-307_125b 2223 chr3L 15493265 15493344 chr3L 15493410 15493489 11 142 6.5 0.0 3.2 2.6 224 chr3L 15493265 exon CG12355 - chr3L 15493377 intron CG12355 - chr3L 15493489 5` UTR CG12355 - chr3L_11_15490001 chr3L_15490001 RAL-307_125b 2224 chr3L 15600118 15600196 chr3L 15600253 15600347 27 149 10.0 0.0 5.0 4.5 229 chr3L 15600118 intron RhoGAP71E + chr3L 15600232 intron RhoGAP71E + chr3L 15600347 intron RhoGAP71E + chr3L_27_15600001 chr3L_15600001 RAL-307_125b 2225 chr3L 15615887 15615947 chr3L 15616033 15616093 30 145 18.0 11.5 14.8 1.9 206 chr3L 15615887 intron comm3 - chr3L 15615990 intron comm3 - chr3L 15616093 intron comm3 - chr3L_30_15615001 chr3L_15615001 RAL-307_125b 2226 chr3L 15633154 15633165 chr3L 15633284 15633295 5 130 17.0 2.5 9.8 0.5 141 chr3L 15633154 intron comm3 - chr3L 15633224 intron comm3 - chr3L 15633295 intron comm3 - chr3L_5_15630001 chr3L_15630001 RAL-307_125b 2227 chr3L 15633174 15633210 chr3L 15633277 15633340 10 126 6.0 1.5 3.8 2.1 166 chr3L 15633174 intron comm3 - chr3L 15633257 intron comm3 - chr3L 15633340 intron comm3 - chr3L_10_15630001 chr3L_15630001 RAL-307_125b 2228 chr3L 15640137 15640210 chr3L 15640277 15640340 21 134 8.0 7.5 7.8 2.4 203 chr3L 15640137 intron comm3 - chr3L 15640238 intron comm3 - chr3L 15640340 intron comm3 - chr3L_21_15640001 chr3L_15640001 RAL-307_125b 2229 chr3L 15691392 15691446 chr3L 15691503 15691551 32 126 1.0 16.5 8.8 3.3 159 chr3L 15691392 intron CG34451 - chr3L 15691472 intron CG34451 - chr3L 15691551 intron CG34451 - chr3L_32_15690001 chr3L_15690001 RAL-307_125b 2230 chr3L 15756830 15756913 chr3L 15756963 15757038 19 125 4.0 0.0 2.0 6.3 208 chr3L 15756830 intergenic not near genes chr3L 15756934 intergenic not near genes chr3L 15757038 intergenic not near genes chr3L_19_15755001 chr3L_15755001 RAL-307_125b 2231 chr3L 15769110 15769121 chr3L 15769253 15769264 5 143 4.5 8.0 6.2 0.7 154 chr3L 15769110 intergenic not near genes chr3L 15769187 intergenic not near genes chr3L 15769264 intergenic not near genes chr3L_5_15765001 chr3L_15765001 RAL-307_125b 2232 chr3L 15832219 15832277 chr3L 15832345 15832356 29 128 8.5 9.5 9.0 2.9 137 chr3L 15832219 intergenic dbo +,CG12713 + chr3L 15832288 intergenic CG12713 +,dbo + chr3L 15832356 intergenic CG12713 +,dbo + chr3L_29_15830001 chr3L_15830001 RAL-307_125b 2233 chr3L 15871550 15871614 chr3L 15871684 15871748 36 134 6.0 3.5 4.8 6.2 198 chr3L 15871550 intron pHCl - chr3L 15871649 intron pHCl - chr3L 15871748 intron pHCl - chr3L_36_15870001 chr3L_15870001 RAL-307_125b 2234 chr3L 15899218 15899243 chr3L 15899796 15899860 jockey 7 594 5.5 3.5 4.5 1.3 642 chr3L 15899218 intergenic pHCl - chr3L 15899539 intergenic not near genes chr3L 15899860 intergenic sff - chr3L_7_15895001 chr3L_15895001 RAL-307_125b 2235 chr3L 15929148 15929219 chr3L 15938341 15938416 roo 15 9194 2.0 8.5 5.2 2.4 9268 chr3L 15929148 intron Pka-C3 - chr3L 15933782 intron Pka-C3 - chr3L 15938416 intron Pka-C3 - chr3L_15_15930001 chr3L_15930001 RAL-307_125b 2236 chr3L 15989186 15989223 chr3L 15989319 15989356 13 132 6.0 6.0 6.0 1.9 170 chr3L 15989186 exon Hip14 + chr3L 15989271 intron Hip14 + chr3L 15989356 intron Hip14 + chr3L_13_15985001 chr3L_15985001 RAL-307_125b 2237 chr3L 16070697 16070762 chr3L 16070824 16070889 30 126 7.0 9.5 8.2 3.3 192 chr3L 16070697 intron Mbs + chr3L 16070793 intron Mbs + chr3L 16070889 exon Mbs + chr3L_30_16070001 chr3L_16070001 RAL-307_125b 2238 chr3L 16145715 16145778 chr3L 16145873 16145935 22 155 0.0 11.5 5.8 3.2 220 chr3L 16145715 intron CG5151 - chr3L 16145825 intron CG5151 - chr3L 16145935 intron CG5151 - chr3L_22_16145001 chr3L_16145001 RAL-307_125b 2239 chr3L 16158764 16158831 chr3L 16158898 16158966 13 135 5.5 13.5 9.5 1.2 202 chr3L 16158764 intron CG5151 - chr3L 16158865 intron CG5151 - chr3L 16158966 intron CG5151 - chr3L_13_16155001 chr3L_16155001 RAL-307_125b 2240 chr3L 16184061 16184133 chr3L 16188930 16188995 X-element 24 4867 9.0 10.0 9.5 2.3 4934 chr3L 16184061 intergenic not near genes chr3L 16186528 intergenic not near genes chr3L 16188995 intergenic not near genes chr3L_24_16185001 chr3L_16185001 RAL-307_125b 2241 chr3L 16221227 16221289 chr3L 16221368 16221430 20 141 5.5 12.0 8.8 2.0 203 chr3L 16221227 intergenic not near genes chr3L 16221328 intergenic not near genes chr3L 16221430 intergenic not near genes chr3L_20_16220001 chr3L_16220001 RAL-307_125b 2242 chr3L 16252063 16252101 chr3L 16252208 16252275 9 165 4.5 3.0 3.8 1.9 212 chr3L 16252063 5` UTR CG13055 - chr3L 16252169 5` UTR CG13055 - chr3L 16252275 5` UTR CG13055 - chr3L_9_16250001 chr3L_16250001 RAL-307_125b 2243 chr3L 16443799 16443877 chr3L 16446189 16446267 Doc 45 2388 9.5 15.0 12.2 3.4 2468 chr3L 16443799 intron,intron CG33158 +,dsx-c73A - chr3L 16445033 intron,intron CG33158 +,dsx-c73A - chr3L 16446267 intron,intron CG33158 +,dsx-c73A - chr3L_45_16445001 chr3L_16445001 RAL-307_125b 2244 chr3L 16452987 16453015 chr3L 16453114 16453142 10 126 9.0 1.0 5.0 1.7 155 chr3L 16452987 intron CG33158 + chr3L 16453064 intron CG33158 + chr3L 16453142 intron CG33158 + chr3L_10_16450001 chr3L_16450001 RAL-307_125b 2245 chr3L 16457477 16457539 chr3L 16457623 16457684 16 146 10.0 10.5 10.2 1.4 207 chr3L 16457477 intron CG33158 + chr3L 16457580 intron CG33158 + chr3L 16457684 intron CG33158 + chr3L_16_16455001 chr3L_16455001 RAL-307_125b 2246 chr3L 16462694 16462750 chr3L 16462826 16462883 21 137 3.5 11.0 7.2 2.6 189 chr3L 16462694 intron CG33158 + chr3L 16462788 intron CG33158 + chr3L 16462883 intron CG33158 + chr3L_21_16460001 chr3L_16460001 RAL-307_125b 2247 chr3L 16476750 16476753 chr3L 16476885 16476888 4 135 9.0 8.0 8.5 0.4 138 chr3L 16476750 intron,intron CG33158 +,aos - chr3L 16476819 intron,intron CG33158 +,aos - chr3L 16476888 intron,intron CG33158 +,aos - chr3L_4_16475001 chr3L_16475001 RAL-307_125b 2248 chr3L 16493939 16493977 chr3L 16494504 16494544 jockey 25 565 15.0 16.0 15.5 1.5 605 chr3L 16493939 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494544 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_25_16490001 chr3L_16490001 RAL-307_125b 2249 chr3L 16493978 16494003 chr3L 16494501 16494559 jockey 15 561 8.0 14.5 11.2 1.2 581 chr3L 16493978 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494268 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494559 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_15_16490001 chr3L_16490001 RAL-307_125b 2250 chr3L 16503615 16503654 chr3L 16503722 16503781 10 112 7.5 9.0 8.2 1.1 166 chr3L 16503615 intron CG43373 - chr3L 16503698 intron CG43373 - chr3L 16503781 intron CG43373 - chr3L_10_16500001 chr3L_16500001 RAL-307_125b 2251 chr3L 16533515 16533578 chr3L 16533675 16533739 25 160 0.0 5.0 2.5 7.1 224 chr3L 16533515 intron CG43373 - chr3L 16533627 intron CG43373 - chr3L 16533739 intron CG43373 - chr3L_25_16530001 chr3L_16530001 RAL-307_125b 2252 chr3L 16537821 16537873 chr3L 16537958 16538010 26 135 8.0 16.0 12.0 2.0 189 chr3L 16537821 intron CG43373 - chr3L 16537916 intron CG43373 - chr3L 16538010 intron CG43373 - chr3L_26_16535001 chr3L_16535001 RAL-307_125b 2253 chr3L 16540013 16540062 chr3L 16540151 16540200 26 137 14.5 8.0 11.2 2.1 187 chr3L 16540013 intron CG43373 - chr3L 16540106 intron CG43373 - chr3L 16540200 intron CG43373 - chr3L_26_16540001 chr3L_16540001 RAL-307_125b 2254 chr3L 16540064 16540077 chr3L 16540145 16540201 7 128 9.5 7.0 8.2 0.8 137 chr3L 16540064 intron CG43373 - chr3L 16540132 intron CG43373 - chr3L 16540201 intron CG43373 - chr3L_7_16540001 chr3L_16540001 RAL-307_125b 2255 chr3L 16610638 16610713 chr3L 16610773 16610848 37 134 8.5 12.0 10.2 3.3 210 chr3L 16610638 intergenic Su(P) -,Prosbeta6 - chr3L 16610743 exon Su(P) - chr3L 16610848 intron Su(P) - chr3L_37_16610001 chr3L_16610001 RAL-307_125b 2256 chr3L 16616477 16616533 chr3L 16621846 16621911 297 19 5372 17.0 11.0 14.0 1.3 5434 chr3L 16616477 3` UTR Abl - chr3L 16619194 3` UTR Abl - chr3L 16621911 3` UTR Abl - chr3L_19_16615001 chr3L_16615001 RAL-307_125b 2257 chr3L 16632190 16632201 chr3L 16632416 16632437 6 233 18.5 4.0 11.2 0.5 247 chr3L 16632190 intron Abl - chr3L 16632314 intron Abl - chr3L 16632437 intron Abl - chr3L_6_16630001 chr3L_16630001 RAL-307_125b 2258 chr3L 16632211 16632260 chr3L 16632415 16632502 15 228 11.0 4.0 7.5 1.8 291 chr3L 16632211 intron Abl - chr3L 16632356 intron Abl - chr3L 16632502 intron Abl - chr3L_15_16630001 chr3L_16630001 RAL-307_125b 2259 chr3L 16643652 16643674 chr3L 16643784 16643796 6 127 9.5 17.0 13.2 0.4 144 chr3L 16643652 intron Abl - chr3L 16643724 intron Abl - chr3L 16643796 intron Abl - chr3L_6_16640001 chr3L_16640001 RAL-307_125b 2260 chr3L 16683984 16684029 chr3L 16689255 16689300 copia 15 5271 6.0 10.0 8.0 1.7 5316 chr3L 16683984 intron,intron Lasp -,CG43954 - chr3L 16686642 intron,intron Lasp -,CG43954 - chr3L 16689300 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_15_16685001 chr3L_16685001 RAL-307_125b 2261 chr3L 16746798 16746855 chr3L 16746916 16746953 13 126 7.0 5.5 6.2 1.8 155 chr3L 16746798 intergenic not near genes chr3L 16746876 intergenic not near genes chr3L 16746953 intergenic not near genes chr3L_13_16745001 chr3L_16745001 RAL-307_125b 2262 chr3L 16757598 16757666 chr3L 16757733 16757806 34 139 11.0 8.5 9.8 3.1 208 chr3L 16757598 intergenic not near genes chr3L 16757702 intergenic not near genes chr3L 16757806 intergenic not near genes chr3L_34_16755001 chr3L_16755001 RAL-307_125b 2263 chr3L 16760796 16760879 chr3L 16760986 16761043 24 183 7.5 11.0 9.2 2.4 247 chr3L 16760796 intergenic not near genes chr3L 16760920 intergenic not near genes chr3L 16761043 intergenic not near genes chr3L_24_16760001 chr3L_16760001 RAL-307_125b 2264 chr3L 16772447 16772513 chr3L 16772587 16772638 37 138 6.0 7.5 6.8 4.7 191 chr3L 16772447 intron Nrt + chr3L 16772542 intron Nrt + chr3L 16772638 intron Nrt + chr3L_37_16770001 chr3L_16770001 RAL-307_125b 2265 chr3L 16796361 16796442 chr3L 16796496 16796579 25 134 7.0 6.5 6.8 3.2 218 chr3L 16796361 intron CG9674 - chr3L 16796470 intron CG9674 - chr3L 16796579 intron CG9674 - chr3L_25_16795001 chr3L_16795001 RAL-307_125b 2266 chr3L 16802442 16802453 chr3L 16803578 16803589 6 1136 56.5 69.0 62.8 0.1 1147 chr3L 16802442 intron CG9674 - chr3L 16803016 intron CG9674 - chr3L 16803589 intron CG9674 - chr3L_6_16800001 chr3L_16800001 RAL-307_125b 2267 chr3L 16802436 16802503 chr3L 16803592 16803639 25 1142 81.0 66.5 73.8 0.3 1203 chr3L 16802436 intron CG9674 - chr3L 16803038 intron CG9674 - chr3L 16803639 intron CG9674 - chr3L_25_16800001 chr3L_16800001 RAL-307_125b 2268 chr3L 16817289 16817357 chr3L 16817416 16817495 20 131 0.0 8.0 4.0 4.0 206 chr3L 16817289 intron,intron nudC +,CG13024 - chr3L 16817392 intron,intron nudC +,CG13024 - chr3L 16817495 intron,intron nudC +,CG13024 - chr3L_20_16815001 chr3L_16815001 RAL-307_125b 2269 chr3L 16818699 16818777 chr3L 16818825 16818881 47 125 15.0 11.5 13.2 3.3 182 chr3L 16818699 intron,intron nudC +,CG13024 - chr3L 16818790 intron,intron nudC +,CG13024 - chr3L 16818881 intron,intron nudC +,CG13024 - chr3L_47_16815001 chr3L_16815001 RAL-307_125b 2270 chr3L 16821247 16821265 chr3L 16821383 16821401 6 136 20.5 9.0 14.8 0.4 154 chr3L 16821247 intron CG13024 - chr3L 16821324 intron CG13024 - chr3L 16821401 intron CG13024 - chr3L_6_16820001 chr3L_16820001 RAL-307_125b 2271 chr3L 16821272 16821285 chr3L 16821379 16821421 5 126 15.5 8.5 12.0 0.4 149 chr3L 16821272 intron CG13024 - chr3L 16821346 intron CG13024 - chr3L 16821421 intron CG13024 - chr3L_5_16820001 chr3L_16820001 RAL-307_125b 2272 chr3L 16826161 16826233 chr3L 16826492 16826564 39 329 8.5 10.0 9.2 3.8 403 chr3L 16826161 intron CG13024 - chr3L 16826362 intron CG13024 - chr3L 16826564 intron CG13024 - chr3L_39_16825001 chr3L_16825001 RAL-307_125b 2273 chr3L 16844974 16845040 chr3L 16845137 16845203 24 156 8.0 11.5 9.8 2.2 229 chr3L 16844974 5` UTR CG9669 - chr3L 16845088 intergenic CG9669 -,CG9715 + chr3L 16845203 intergenic CG9715 +,CG9669 - chr3L_24_16845001 chr3L_16845001 RAL-307_125b 2274 chr3L 16873290 16873356 chr3L 16873444 16873511 12 153 1.5 5.5 3.5 2.7 221 chr3L 16873290 intron Lmpt + chr3L 16873400 intron Lmpt + chr3L 16873511 intron Lmpt + chr3L_12_16870001 chr3L_16870001 RAL-307_125b 2275 chr3L 16941352 16941434 chr3L 16941503 16941585 18 150 6.0 2.5 4.2 3.5 233 chr3L 16941352 intron Cpr73D - chr3L 16941468 intron Cpr73D - chr3L 16941585 intron Cpr73D - chr3L_18_16940001 chr3L_16940001 RAL-307_125b 2276 chr3L 16945686 16945705 chr3L 16954889 16954893 roo 5 9197 16.5 10.0 13.2 0.4 9207 chr3L 16945686 exon Obp73a + chr3L 16950290 intergenic not near genes chr3L 16954893 5` UTR Nc73EF + chr3L_5_16950001 chr3L_16950001 RAL-307_125b 2277 chr3L 16945714 16945753 chr3L 16954882 16954956 roo 22 9192 8.5 7.5 8.0 2.4 9242 chr3L 16945714 exon Obp73a + chr3L 16950335 intergenic not near genes chr3L 16954956 5` UTR Nc73EF + chr3L_22_16950001 chr3L_16950001 RAL-307_125b 2278 chr3L 17008416 17008522 chr3L 17008836 17008883 18 410 0.5 10.0 5.2 2.9 467 chr3L 17008416 intron CG3764 - chr3L 17008650 intron CG3764 - chr3L 17008883 intron CG3764 - chr3L_18_17005001 chr3L_17005001 RAL-307_125b 2279 chr3L 17034890 17034950 chr3L 17035123 17035187 G2 25 238 10.5 10.0 10.2 2.2 297 chr3L 17034890 intergenic not near genes chr3L 17035038 intergenic not near genes chr3L 17035187 intergenic beg + chr3L_25_17035001 chr3L_17035001 RAL-307_125b 2280 chr3L 17084965 17085032 chr3L 17094164 17094231 roo 33 9199 9.0 15.0 12.0 2.5 9266 chr3L 17084965 intron Rbp6 - chr3L 17089598 intron Rbp6 - chr3L 17094231 intron Rbp6 - chr3L_33_17085001 chr3L_17085001 RAL-307_125b 2281 chr3L 17120602 17120894 chr3L 17120728 17121017 55 125 24.5 10.0 17.2 3.0 415 chr3L 17120602 intron Rbp6 - chr3L 17120810 intron Rbp6 - chr3L 17121017 intron Rbp6 - chr3L_55_17120001 chr3L_17120001 RAL-307_125b 2282 chr3L 17120906 17120944 chr3L 17121003 17121049 19 108 8.5 9.0 8.8 1.9 143 chr3L 17120906 intron Rbp6 - chr3L 17120978 intron Rbp6 - chr3L 17121049 intron Rbp6 - chr3L_19_17120001 chr3L_17120001 RAL-307_125b 2283 chr3L 17149116 17149166 chr3L 17149247 17149257 8 126 11.5 0.0 5.8 1.2 141 chr3L 17149116 intron Rbp6 - chr3L 17149186 intron Rbp6 - chr3L 17149257 intron Rbp6 - chr3L_8_17145001 chr3L_17145001 RAL-307_125b 2284 chr3L 17217217 17217275 chr3L 17217336 17217405 31 128 9.5 8.5 9.0 3.1 188 chr3L 17217217 intron Rbp6 - chr3L 17217311 intron Rbp6 - chr3L 17217405 intron Rbp6 - chr3L_31_17215001 chr3L_17215001 RAL-307_125b 2285 chr3L 17272191 17272266 chr3L 17272374 17272449 8 177 1.5 9.0 5.2 1.3 258 chr3L 17272191 intergenic not near genes chr3L 17272320 intergenic not near genes chr3L 17272449 intergenic not near genes chr3L_8_17270001 chr3L_17270001 RAL-307_125b 2286 chr3L 17357992 17358055 chr3L 17358147 17358210 24 155 6.0 10.0 8.0 2.7 218 chr3L 17357992 3` UTR CG7692 + chr3L 17358101 intergenic CG7692 + chr3L 17358210 intergenic CG7692 + chr3L_24_17355001 chr3L_17355001 RAL-307_125b 2287 chr3L 17408863 17408926 chr3L 17408989 17409053 32 126 12.0 8.5 10.2 2.9 190 chr3L 17408863 intron blot - chr3L 17408958 intron blot - chr3L 17409053 intron blot - chr3L_32_17405001 chr3L_17405001 RAL-307_125b 2288 chr3L 17419811 17419890 chr3L 17419974 17420055 20 162 8.5 12.0 10.2 1.8 244 chr3L 17419811 intron blot - chr3L 17419933 intron blot - chr3L 17420055 intron blot - chr3L_20_17415001 chr3L_17415001 RAL-307_125b 2289 chr3L 17510695 17510756 chr3L 17510829 17510875 24 130 5.0 6.5 5.8 3.5 180 chr3L 17510695 exon Oatp74D + chr3L 17510785 intron Oatp74D + chr3L 17510875 intron Oatp74D + chr3L_24_17510001 chr3L_17510001 RAL-307_125b 2290 chr3L 17516952 17516969 chr3L 17524548 17524574 412 13 7605 17.5 17.5 17.5 0.7 7622 chr3L 17516952 intron CG7564 + chr3L 17520763 intron CG7564 + chr3L 17524574 3` UTR CG7564 + chr3L_13_17520001 chr3L_17520001 RAL-307_125b 2291 chr3L 17516975 17517002 chr3L 17524543 17524604 412 8 7602 14.5 15.5 15.0 0.5 7629 chr3L 17516975 intron CG7564 + chr3L 17520790 intron CG7564 + chr3L 17524604 3` UTR CG7564 + chr3L_8_17520001 chr3L_17520001 RAL-307_125b 2292 chr3L 17535770 17535786 chr3L 17535934 17535950 6 164 6.5 11.0 8.8 0.6 180 chr3L 17535770 intron Nedd4 + chr3L 17535860 intron Nedd4 + chr3L 17535950 intron Nedd4 + chr3L_6_17535001 chr3L_17535001 RAL-307_125b 2293 chr3L 17535788 17535840 chr3L 17535932 17535981 13 154 4.5 10.5 7.5 1.5 193 chr3L 17535788 intron Nedd4 + chr3L 17535884 intron Nedd4 + chr3L 17535981 intron Nedd4 + chr3L_13_17535001 chr3L_17535001 RAL-307_125b 2294 chr3L 17580535 17580601 chr3L 17580761 17580775 15 221 13.5 0.5 7.0 1.9 240 chr3L 17580535 intron Eip74EF - chr3L 17580655 intron Eip74EF - chr3L 17580775 intron Eip74EF - chr3L_15_17580001 chr3L_17580001 RAL-307_125b 2295 chr3L 17612170 17612182 chr3L 17612305 17612306 4 130 15.0 5.0 10.0 0.4 136 chr3L 17612170 intron Eip74EF - chr3L 17612238 intron Eip74EF - chr3L 17612306 intron Eip74EF - chr3L_4_17610001 chr3L_17610001 RAL-307_125b 2296 chr3L 17612202 17612244 chr3L 17612299 17612371 11 123 7.5 4.5 6.0 1.6 169 chr3L 17612202 intron Eip74EF - chr3L 17612286 intron Eip74EF - chr3L 17612371 intron Eip74EF - chr3L_11_17610001 chr3L_17610001 RAL-307_125b 2297 chr3L 17674601 17674654 chr3L 17675315 17675362 14 713 9.5 2.5 6.0 2.0 761 chr3L 17674601 intron CG34251 + chr3L 17674982 intron CG34251 + chr3L 17675362 intron CG34251 + chr3L_14_17670001 chr3L_17670001 RAL-307_125b 2298 chr3L 17691936 17691991 chr3L 17692070 17692124 5 133 2.0 7.5 4.8 0.9 188 chr3L 17691936 intron Ccn + chr3L 17692030 intron Ccn + chr3L 17692124 intron Ccn + chr3L_5_17690001 chr3L_17690001 RAL-307_125b 2299 chr3L 17730807 17730872 chr3L 17738187 17738252 mdg1 39 7378 8.0 11.5 9.8 3.6 7445 chr3L 17730807 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738252 intron Ccn + chr3L_39_17730001 chr3L_17730001 RAL-307_125b 2300 chr3L 17789805 17789870 chr3L 17789931 17789996 11 126 11.5 10.5 11.0 0.9 191 chr3L 17789805 intergenic not near genes chr3L 17789900 intergenic not near genes chr3L 17789996 intergenic not near genes chr3L_11_17785001 chr3L_17785001 RAL-307_125b 2301 chr3L 17790413 17790452 chr3L 17790604 17790625 9 187 12.5 0.5 6.5 1.2 212 chr3L 17790413 intergenic not near genes chr3L 17790519 intergenic not near genes chr3L 17790625 intergenic CG42815 - chr3L_9_17790001 chr3L_17790001 RAL-307_125b 2302 chr3L 17790457 17790487 chr3L 17790596 17790890 7 296 2.5 0.5 1.5 2.8 433 chr3L 17790457 intergenic not near genes chr3L 17790674 intergenic CG42815 - chr3L 17790890 intergenic CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-307_125b 2303 chr3L 17790597 17790625 chr3L 17790912 17790940 17 314 0.5 19.5 10.0 1.5 343 chr3L 17790597 intergenic CG42815 - chr3L 17790768 intergenic CG42815 - chr3L 17790940 intergenic CG42815 - chr3L_17_17790001 chr3L_17790001 RAL-307_125b 2304 chr3L 17791894 17791906 chr3L 17792021 17792033 11 127 9.0 7.0 8.0 1.2 139 chr3L 17791894 intergenic CG42816 -,CG42815 - chr3L 17791964 intergenic CG42816 -,CG42815 - chr3L 17792033 intergenic CG42816 - chr3L_11_17790001 chr3L_17790001 RAL-307_125b 2305 chr3L 17791908 17791915 chr3L 17792020 17792042 5 123 6.0 6.5 6.2 0.7 134 chr3L 17791908 intergenic CG42816 -,CG42815 - chr3L 17791975 intergenic CG42816 -,CG42815 - chr3L 17792042 intergenic CG42816 - chr3L_5_17790001 chr3L_17790001 RAL-307_125b 2306 chr3L 17799768 17799780 chr3L 17801605 17801617 S-element 9 1837 29.5 12.5 21.0 0.4 1849 chr3L 17799768 intron NUCB1 - chr3L 17800692 intron NUCB1 - chr3L 17801617 intron NUCB1 - chr3L_9_17800001 chr3L_17800001 RAL-307_125b 2307 chr3L 17799782 17799833 chr3L 17801601 17801670 S-element 41 1835 11.0 12.5 11.8 3.2 1888 chr3L 17799782 intron NUCB1 - chr3L 17800726 intron NUCB1 - chr3L 17801670 intron NUCB1 - chr3L_41_17800001 chr3L_17800001 RAL-307_125b 2308 chr3L 17834301 17834353 chr3L 17834515 17834522 25 211 5.5 7.5 6.5 3.3 221 chr3L 17834301 intron Grd + chr3L 17834412 intron Grd + chr3L 17834522 intron Grd + chr3L_25_17830001 chr3L_17830001 RAL-307_125b 2309 chr3L 17918338 17918397 chr3L 17921191 17921250 opus 9 2853 9.5 9.5 9.5 0.9 2912 chr3L 17918338 intergenic not near genes chr3L 17919794 intergenic not near genes chr3L 17921250 intergenic not near genes chr3L_9_17915001 chr3L_17915001 RAL-307_125b 2310 chr3L 17921831 17921881 chr3L 17921968 17922018 11 137 9.5 9.0 9.2 1.1 187 chr3L 17921831 intergenic not near genes chr3L 17921924 intergenic not near genes chr3L 17922018 intergenic not near genes chr3L_11_17920001 chr3L_17920001 RAL-307_125b 2311 chr3L 17946018 17946037 chr3L 17946149 17946168 12 130 6.5 7.0 6.8 1.5 150 chr3L 17946018 3` UTR CG43174 + chr3L 17946093 3` UTR CG43174 + chr3L 17946168 intergenic CG43174 + chr3L_12_17945001 chr3L_17945001 RAL-307_125b 2312 chr3L 17991533 17991582 chr3L 17991661 17991709 27 127 16.5 13.0 14.8 1.7 176 chr3L 17991533 intron Eip75B - chr3L 17991621 intron Eip75B - chr3L 17991709 intron Eip75B - chr3L_27_17990001 chr3L_17990001 RAL-307_125b 2313 chr3L 18000625 18000701 chr3L 18000752 18000828 40 126 13.0 13.0 13.0 2.9 203 chr3L 18000625 intron Eip75B - chr3L 18000726 intron Eip75B - chr3L 18000828 intron Eip75B - chr3L_40_18000001 chr3L_18000001 RAL-307_125b 2314 chr3L 18011052 18011092 chr3L 18011257 18011299 12 214 23.5 0.0 11.8 0.9 247 chr3L 18011052 intron Eip75B - chr3L 18011176 intron Eip75B - chr3L 18011299 intron Eip75B - chr3L_12_18010001 chr3L_18010001 RAL-307_125b 2315 chr3L 18029907 18029940 chr3L 18030034 18030067 12 127 16.0 0.5 8.2 1.3 160 chr3L 18029907 intron Eip75B - chr3L 18029987 intron Eip75B - chr3L 18030067 intron Eip75B - chr3L_12_18025001 chr3L_18025001 RAL-307_125b 2316 chr3L 18047662 18047733 chr3L 18056769 18056840 roo 34 9107 10.0 15.0 12.5 2.5 9178 chr3L 18047662 intron Eip75B - chr3L 18052251 intron Eip75B - chr3L 18056840 intron Eip75B - chr3L_34_18050001 chr3L_18050001 RAL-307_125b 2317 chr3L 18075194 18075254 chr3L 18075509 18075569 32 315 14.0 9.0 11.5 2.6 375 chr3L 18075194 intergenic not near genes chr3L 18075382 intergenic not near genes chr3L 18075569 intergenic not near genes chr3L_32_18075001 chr3L_18075001 RAL-307_125b 2318 chr3L 18089574 18089596 chr3L 18089717 18089739 11 143 11.5 0.0 5.8 1.6 165 chr3L 18089574 exon CG13698 - chr3L 18089656 intron CG13698 - chr3L 18089739 intron CG13698 - chr3L_11_18085001 chr3L_18085001 RAL-307_125b 2319 chr3L 18089598 18089648 chr3L 18089716 18089776 11 127 5.5 0.0 2.8 2.9 178 chr3L 18089598 exon CG13698 - chr3L 18089687 intron CG13698 - chr3L 18089776 intron CG13698 - chr3L_11_18085001 chr3L_18085001 RAL-307_125b 2320 chr3L 18092406 18092414 chr3L 18092578 18092589 4 174 11.0 23.5 17.2 0.2 183 chr3L 18092406 intron CG13698 - chr3L 18092498 intron CG13698 - chr3L 18092589 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-307_125b 2321 chr3L 18107569 18107649 chr3L 18107712 18107796 24 143 8.5 8.5 8.5 2.5 227 chr3L 18107569 intergenic mRpS26 +,CG5147 - chr3L 18107682 intergenic CG5147 -,mRpS26 + chr3L 18107796 intergenic CG5147 -,mRpS26 + chr3L_24_18105001 chr3L_18105001 RAL-307_125b 2322 chr3L 18113265 18113283 chr3L 18113412 18113430 10 146 9.5 21.0 15.2 0.6 165 chr3L 18113265 intron,intron CG32195 +,CG7341 + chr3L 18113348 intron,intron CG32195 +,CG7341 + chr3L 18113430 intron,intron CG32195 +,CG7341 + chr3L_10_18110001 chr3L_18110001 RAL-307_125b 2323 chr3L 18118167 18118236 chr3L 18118295 18118364 29 126 4.5 0.5 2.5 8.3 197 chr3L 18118167 3` UTR,intron CG32195 +,CG7341 + chr3L 18118266 3` UTR,intron CG32195 +,CG7341 + chr3L 18118364 3` UTR,intron CG32195 +,CG7341 + chr3L_29_18115001 chr3L_18115001 RAL-307_125b 2324 chr3L 18134579 18134582 chr3L 18134766 18134769 4 187 21.5 12.0 16.8 0.2 190 chr3L 18134579 intergenic not near genes chr3L 18134674 intergenic not near genes chr3L 18134769 intergenic not near genes chr3L_4_18130001 chr3L_18130001 RAL-307_125b 2325 chr3L 18134584 18134593 chr3L 18134760 18134780 5 184 18.5 11.0 14.8 0.3 196 chr3L 18134584 intergenic not near genes chr3L 18134682 intergenic not near genes chr3L 18134780 intergenic not near genes chr3L_5_18130001 chr3L_18130001 RAL-307_125b 2326 chr3L 18134595 18134638 chr3L 18134758 18134825 22 180 9.0 10.5 9.8 2.0 230 chr3L 18134595 intergenic not near genes chr3L 18134710 intergenic not near genes chr3L 18134825 intergenic not near genes chr3L_22_18130001 chr3L_18130001 RAL-307_125b 2327 chr3L 18150268 18150331 chr3L 18150415 18150478 33 146 9.5 8.5 9.0 3.3 210 chr3L 18150268 intron CG7330 + chr3L 18150373 intron CG7330 + chr3L 18150478 intron CG7330 + chr3L_33_18150001 chr3L_18150001 RAL-307_125b 2328 chr3L 18172642 18172704 chr3L 18172768 18172830 24 126 13.0 11.5 12.2 1.8 188 chr3L 18172642 intron W - chr3L 18172736 intron W - chr3L 18172830 intron W - chr3L_24_18170001 chr3L_18170001 RAL-307_125b 2329 chr3L 18175765 18175834 chr3L 18176054 18176123 46 288 15.5 8.0 11.8 3.6 358 chr3L 18175765 intron W - chr3L 18175944 intron W - chr3L 18176123 intron W - chr3L_46_18175001 chr3L_18175001 RAL-307_125b 2330 chr3L 18198929 18198930 chr3L 24821492 24821494 7 6622563 3.5 27.5 15.5 0.4 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-307_125b 2331 chr3L 18203555 18203602 chr3L 18203700 18203735 9 136 12.0 1.5 6.8 1.2 180 chr3L 18203555 exon CG7320 + chr3L 18203645 intergenic CG7320 + chr3L 18203735 intergenic CG7320 + chr3L_9_18200001 chr3L_18200001 RAL-307_125b 2332 chr3L 18207865 18207929 chr3L 18208000 18208087 22 135 3.0 0.0 1.5 8.8 222 chr3L 18207865 intergenic not near genes chr3L 18207976 intergenic not near genes chr3L 18208087 intergenic not near genes chr3L_22_18205001 chr3L_18205001 RAL-307_125b 2333 chr3L 18208252 18208318 chr3L 18208390 18208456 32 135 11.5 11.0 11.2 2.6 204 chr3L 18208252 intergenic not near genes chr3L 18208354 intergenic not near genes chr3L 18208456 intergenic not near genes chr3L_32_18205001 chr3L_18205001 RAL-307_125b 2334 chr3L 18210698 18210749 chr3L 18210824 18210875 24 124 5.0 7.0 6.0 3.4 177 chr3L 18210698 intergenic not near genes chr3L 18210786 intergenic not near genes chr3L 18210875 intergenic not near genes chr3L_24_18210001 chr3L_18210001 RAL-307_125b 2335 chr3L 18223113 18223181 chr3L 18223246 18223326 13 143 9.5 0.0 4.8 2.2 213 chr3L 18223113 intergenic not near genes chr3L 18223220 intergenic not near genes chr3L 18223326 intergenic not near genes chr3L_13_18220001 chr3L_18220001 RAL-307_125b 2336 chr3L 18226622 18226630 chr3L 18226762 18226770 6 139 13.5 6.5 10.0 0.5 148 chr3L 18226622 intergenic not near genes chr3L 18226696 intergenic not near genes chr3L 18226770 intergenic not near genes chr3L_6_18225001 chr3L_18225001 RAL-307_125b 2337 chr3L 18248905 18248978 chr3L 18249053 18249126 24 147 7.5 7.5 7.5 2.8 221 chr3L 18248905 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249126 intergenic not near genes chr3L_24_18245001 chr3L_18245001 RAL-307_125b 2338 chr3L 18262423 18262487 chr3L 18262556 18262621 29 132 8.5 8.5 8.5 3.1 198 chr3L 18262423 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262621 intergenic not near genes chr3L_29_18260001 chr3L_18260001 RAL-307_125b 2339 chr3L 18301300 18301379 chr3L 18301438 18301518 28 137 2.5 7.0 4.8 4.8 218 chr3L 18301300 intergenic CG13700 - chr3L 18301409 intergenic CG13700 - chr3L 18301518 intergenic CG13700 - chr3L_28_18300001 chr3L_18300001 RAL-307_125b 2340 chr3L 18324166 18324171 chr3L 18324294 18324300 6 128 2.5 22.0 12.2 0.5 134 chr3L 18324166 intergenic not near genes chr3L 18324233 intergenic not near genes chr3L 18324300 intergenic not near genes chr3L_6_18320001 chr3L_18320001 RAL-307_125b 2341 chr3L 18342035 18342101 chr3L 18342165 18342225 11 129 6.5 9.5 8.0 1.2 190 chr3L 18342035 intergenic not near genes chr3L 18342130 intergenic not near genes chr3L 18342225 intergenic not near genes chr3L_11_18340001 chr3L_18340001 RAL-307_125b 2342 chr3L 18352185 18352258 chr3L 18352815 18352888 16 628 8.5 6.0 7.2 2.0 703 chr3L 18352185 intergenic not near genes chr3L 18352536 intergenic not near genes chr3L 18352888 intergenic not near genes chr3L_16_18350001 chr3L_18350001 RAL-307_125b 2343 chr3L 18375153 18375293 chr3L 18375282 18375494 6 173 0.0 0.0 0.0 6.0 341 chr3L 18375153 intergenic not near genes chr3L 18375324 intergenic not near genes chr3L 18375494 intergenic not near genes chr3L_6_18375001 chr3L_18375001 RAL-307_125b 2344 chr3L 18383049 18383128 chr3L 18383183 18383260 17 133 6.0 9.5 7.8 1.9 211 chr3L 18383049 intergenic not near genes chr3L 18383154 intergenic not near genes chr3L 18383260 intergenic not near genes chr3L_17_18380001 chr3L_18380001 RAL-307_125b 2345 chr3L 18408682 18408756 chr3L 18408818 18408892 20 136 5.0 5.5 5.2 3.2 210 chr3L 18408682 intergenic not near genes chr3L 18408787 intergenic not near genes chr3L 18408892 intergenic not near genes chr3L_20_18405001 chr3L_18405001 RAL-307_125b 2346 chr3L 18436018 18436085 chr3L 18436166 18436233 23 148 7.5 8.5 8.0 2.6 215 chr3L 18436018 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436233 intergenic not near genes chr3L_23_18435001 chr3L_18435001 RAL-307_125b 2347 chr3L 18445203 18445273 chr3L 18445331 18445401 26 126 5.5 7.5 6.5 3.5 198 chr3L 18445203 intergenic not near genes chr3L 18445302 intergenic not near genes chr3L 18445401 intergenic not near genes chr3L_26_18445001 chr3L_18445001 RAL-307_125b 2348 chr3L 18448574 18448621 chr3L 18448716 18448763 20 142 12.5 13.0 12.8 1.4 189 chr3L 18448574 intergenic not near genes chr3L 18448668 intergenic not near genes chr3L 18448763 intergenic not near genes chr3L_20_18445001 chr3L_18445001 RAL-307_125b 2349 chr3L 18456225 18456297 chr3L 18456363 18456435 34 136 8.5 8.5 8.5 3.6 210 chr3L 18456225 intergenic CR44670 - chr3L 18456330 intergenic CR44670 - chr3L 18456435 3` UTR CR44670 - chr3L_34_18455001 chr3L_18455001 RAL-307_125b 2350 chr3L 18506092 18506147 chr3L 18509605 18509618 F-element 34 3510 12.0 10.0 11.0 2.8 3526 chr3L 18506092 intergenic not near genes chr3L 18507855 intergenic not near genes chr3L 18509618 intergenic not near genes chr3L_34_18505001 chr3L_18505001 RAL-307_125b 2351 chr3L 18511830 18511890 chr3L 18511972 18512032 26 140 13.0 14.0 13.5 1.8 202 chr3L 18511830 intergenic not near genes chr3L 18511931 intergenic not near genes chr3L 18512032 intergenic not near genes chr3L_26_18510001 chr3L_18510001 RAL-307_125b 2352 chr3L 18514865 18514927 chr3L 18520106 18520110 BS 39 5238 14.0 15.5 14.8 2.5 5245 chr3L 18514865 intergenic not near genes chr3L 18517488 intergenic not near genes chr3L 18520110 intergenic not near genes chr3L_39_18515001 chr3L_18515001 RAL-307_125b 2353 chr3L 18520502 18520570 chr3L 18520632 18520701 31 127 7.0 7.5 7.2 3.8 199 chr3L 18520502 intergenic not near genes chr3L 18520602 intergenic not near genes chr3L 18520701 intergenic not near genes chr3L_31_18520001 chr3L_18520001 RAL-307_125b 2354 chr3L 18528586 18528652 chr3L 18537797 18537863 roo 30 9210 8.0 7.0 7.5 3.5 9277 chr3L 18528586 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537863 intergenic not near genes chr3L_30_18530001 chr3L_18530001 RAL-307_125b 2355 chr3L 18555061 18555074 chr3L 18555195 18555208 6 133 8.5 8.5 8.5 0.6 147 chr3L 18555061 intergenic not near genes chr3L 18555134 intergenic not near genes chr3L 18555208 intergenic not near genes chr3L_6_18555001 chr3L_18555001 RAL-307_125b 2356 chr3L 18566976 18567054 chr3L 18567112 18567190 45 134 6.0 8.0 7.0 5.6 214 chr3L 18566976 intron AstC-R1 + chr3L 18567083 intron AstC-R1 + chr3L 18567190 intron AstC-R1 + chr3L_45_18565001 chr3L_18565001 RAL-307_125b 2357 chr3L 18582169 18582245 chr3L 18582304 18582369 30 132 3.5 11.0 7.2 3.7 200 chr3L 18582169 intergenic not near genes chr3L 18582269 intergenic not near genes chr3L 18582369 intergenic not near genes chr3L_30_18580001 chr3L_18580001 RAL-307_125b 2358 chr3L 18586521 18586594 chr3L 18586670 18586743 24 146 4.5 5.5 5.0 4.0 222 chr3L 18586521 intergenic not near genes chr3L 18586632 intergenic not near genes chr3L 18586743 intergenic not near genes chr3L_24_18585001 chr3L_18585001 RAL-307_125b 2359 chr3L 18593903 18593976 chr3L 18595933 18596009 Doc 27 2030 8.5 4.0 6.2 3.8 2106 chr3L 18593903 intergenic term - chr3L 18594956 intergenic not near genes chr3L 18596009 intergenic CR45389 + chr3L_27_18590001 chr3L_18590001 RAL-307_125b 2360 chr3L 18607018 18607097 chr3L 18607149 18607193 33 123 7.0 6.0 6.5 4.4 175 chr3L 18607018 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L 18607106 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18607193 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_33_18605001 chr3L_18605001 RAL-307_125b 2361 chr3L 18638536 18638604 chr3L 18638680 18638738 34 140 12.0 8.0 10.0 3.1 202 chr3L 18638536 intron MYPT-75D + chr3L 18638637 intron MYPT-75D + chr3L 18638738 intron MYPT-75D + chr3L_34_18635001 chr3L_18635001 RAL-307_125b 2362 chr3L 18665164 18665242 chr3L 18665299 18665367 20 135 12.5 0.0 6.2 2.8 203 chr3L 18665164 intron MYPT-75D + chr3L 18665266 intron MYPT-75D + chr3L 18665367 intron MYPT-75D + chr3L_20_18665001 chr3L_18665001 RAL-307_125b 2363 chr3L 18677871 18677876 chr3L 18678011 18678021 4 144 11.5 13.5 12.5 0.3 150 chr3L 18677871 3` UTR GNBP1 + chr3L 18677946 intergenic GNBP1 + chr3L 18678021 intergenic GNBP1 + chr3L_4_18675001 chr3L_18675001 RAL-307_125b 2364 chr3L 18677877 18677885 chr3L 18678008 18678030 8 141 11.0 12.5 11.8 0.6 153 chr3L 18677877 intergenic GNBP1 + chr3L 18677954 intergenic GNBP1 + chr3L 18678030 intergenic GNBP1 + chr3L_8_18675001 chr3L_18675001 RAL-307_125b 2365 chr3L 18677886 18677917 chr3L 18677993 18678057 14 138 3.5 9.5 6.5 1.9 171 chr3L 18677886 intergenic GNBP1 + chr3L 18677972 intergenic GNBP1 + chr3L 18678057 intergenic GNBP1 + chr3L_14_18675001 chr3L_18675001 RAL-307_125b 2366 chr3L 18710717 18710784 chr3L 18718719 18718786 Stalker2 30 8001 14.0 8.5 11.2 2.5 8069 chr3L 18710717 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718786 intergenic not near genes chr3L_30_18710001 chr3L_18710001 RAL-307_125b 2367 chr3L 18721722 18721793 chr3L 18721863 18721934 24 139 10.0 10.5 10.2 2.1 212 chr3L 18721722 intergenic CG12477 - chr3L 18721828 intergenic CG12477 - chr3L 18721934 3` UTR CG12477 - chr3L_24_18720001 chr3L_18720001 RAL-307_125b 2368 chr3L 18753502 18753559 chr3L 18753634 18753691 15 131 6.0 13.5 9.8 1.4 189 chr3L 18753502 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753691 intron ftz-f1 - chr3L_15_18750001 chr3L_18750001 RAL-307_125b 2369 chr3L 18770612 18770674 chr3L 18770747 18770809 25 135 9.0 3.5 6.2 3.5 197 chr3L 18770612 intron ftz-f1 - chr3L 18770710 intron ftz-f1 - chr3L 18770809 intron ftz-f1 - chr3L_25_18770001 chr3L_18770001 RAL-307_125b 2370 chr3L 18772365 18772431 chr3L 18781096 18781162 roo 36 8731 9.0 11.5 10.2 3.2 8797 chr3L 18772365 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781162 intron ftz-f1 - chr3L_36_18775001 chr3L_18775001 RAL-307_125b 2371 chr3L 18784343 18784403 chr3L 18784482 18784542 26 138 8.0 11.0 9.5 2.5 199 chr3L 18784343 intron ftz-f1 - chr3L 18784442 intron ftz-f1 - chr3L 18784542 intron ftz-f1 - chr3L_26_18780001 chr3L_18780001 RAL-307_125b 2372 chr3L 18784706 18784726 chr3L 18784844 18784874 INE-1 11 146 22.0 7.5 14.8 0.7 168 chr3L 18784706 intron ftz-f1 - chr3L 18784790 intron ftz-f1 - chr3L 18784874 intron ftz-f1 - chr3L_11_18780001 chr3L_18780001 RAL-307_125b 2373 chr3L 18792526 18792599 chr3L 18792655 18792731 53 132 10.5 11.0 10.8 4.5 205 chr3L 18792526 intron ftz-f1 - chr3L 18792628 intron ftz-f1 - chr3L 18792731 intron ftz-f1 - chr3L_53_18790001 chr3L_18790001 RAL-307_125b 2374 chr3L 18810097 18810110 chr3L 18810224 18810232 7 126 16.5 6.0 11.2 0.6 135 chr3L 18810097 intron CG14073 - chr3L 18810164 intron CG14073 - chr3L 18810232 intron CG14073 - chr3L_7_18810001 chr3L_18810001 RAL-307_125b 2375 chr3L 18833738 18833805 chr3L 18834952 18835019 1360 34 1210 12.0 13.5 12.8 2.5 1281 chr3L 18833738 intron Indy - chr3L 18834378 intron Indy - chr3L 18835019 intron Indy - chr3L_34_18830001 chr3L_18830001 RAL-307_125b 2376 chr3L 18839709 18839760 chr3L 18839840 18839903 21 132 0.5 6.0 3.2 5.0 194 chr3L 18839709 intron Indy - chr3L 18839806 intron Indy - chr3L 18839903 intron Indy - chr3L_21_18835001 chr3L_18835001 RAL-307_125b 2377 chr3L 18863928 18863997 chr3L 18864062 18864133 6 135 4.5 0.0 2.2 1.9 205 chr3L 18863928 intron CG6865 + chr3L 18864030 intron CG6865 + chr3L 18864133 intron CG6865 + chr3L_6_18860001 chr3L_18860001 RAL-307_125b 2378 chr3L 18868908 18868968 chr3L 18869060 18869120 33 151 15.0 16.5 15.8 2.0 212 chr3L 18868908 3` UTR Dysb + chr3L 18869014 3` UTR Dysb + chr3L 18869120 3` UTR Dysb + chr3L_33_18865001 chr3L_18865001 RAL-307_125b 2379 chr3L 18868969 18868976 chr3L 18869059 18869123 5 137 14.0 16.0 15.0 0.3 154 chr3L 18868969 3` UTR Dysb + chr3L 18869046 3` UTR Dysb + chr3L 18869123 3` UTR Dysb + chr3L_5_18865001 chr3L_18865001 RAL-307_125b 2380 chr3L 18924430 18924506 chr3L 18924555 18924632 33 126 5.0 7.5 6.2 4.6 202 chr3L 18924430 intron CG32204 - chr3L 18924531 intron CG32204 - chr3L 18924632 intron CG32204 - chr3L_33_18920001 chr3L_18920001 RAL-307_125b 2381 chr3L 18928882 18928890 chr3L 18929012 18929020 4 130 0.0 14.5 7.2 0.5 138 chr3L 18928882 intron CG32204 - chr3L 18928951 intron CG32204 - chr3L 18929020 intron CG32204 - chr3L_4_18925001 chr3L_18925001 RAL-307_125b 2382 chr3L 18933050 18933120 chr3L 18933185 18933245 30 134 6.0 13.5 9.8 2.8 195 chr3L 18933050 5` UTR CG32204 - chr3L 18933148 intron CG32204 - chr3L 18933245 intron CG32204 - chr3L_30_18930001 chr3L_18930001 RAL-307_125b 2383 chr3L 18959951 18960021 chr3L 18960082 18960152 33 131 13.0 9.5 11.2 2.7 201 chr3L 18959951 intergenic not near genes chr3L 18960052 intergenic not near genes chr3L 18960152 intergenic not near genes chr3L_33_18960001 chr3L_18960001 RAL-307_125b 2384 chr3L 18962553 18962623 chr3L 18962683 18962753 16 128 10.0 9.0 9.5 1.5 200 chr3L 18962553 intergenic not near genes chr3L 18962653 intergenic not near genes chr3L 18962753 intergenic not near genes chr3L_16_18960001 chr3L_18960001 RAL-307_125b 2385 chr3L 19008825 19008867 chr3L 19009196 19009255 jockey 16 383 0.0 9.0 4.5 2.9 430 chr3L 19008825 intron nkd - chr3L 19009040 intron nkd - chr3L 19009255 intron nkd - chr3L_16_19005001 chr3L_19005001 RAL-307_125b 2386 chr3L 19015152 19015217 chr3L 19015286 19015347 20 133 1.0 17.0 9.0 2.0 195 chr3L 19015152 intron nkd - chr3L 19015250 intron nkd - chr3L 19015347 intron nkd - chr3L_20_19015001 chr3L_19015001 RAL-307_125b 2387 chr3L 19056798 19056804 chr3L 19056971 19056977 5 173 12.0 16.0 14.0 0.3 179 chr3L 19056798 intergenic not near genes chr3L 19056888 intergenic not near genes chr3L 19056977 intergenic not near genes chr3L_5_19055001 chr3L_19055001 RAL-307_125b 2388 chr3L 19111379 19111406 chr3L 19111514 19111541 10 135 10.5 11.5 11.0 0.8 162 chr3L 19111379 intron CG14082 - chr3L 19111460 intron CG14082 - chr3L 19111541 intron CG14082 - chr3L_10_19110001 chr3L_19110001 RAL-307_125b 2389 chr3L 19115604 19115668 chr3L 19115819 19115888 BS 26 224 11.0 6.0 8.5 2.7 284 chr3L 19115604 intron CG14082 - chr3L 19115746 intron CG14082 - chr3L 19115888 intron CG14082 - chr3L_26_19115001 chr3L_19115001 RAL-307_125b 2390 chr3L 19117002 19117068 chr3L 19124498 19124551 mdg1 34 7496 11.0 7.5 9.2 3.3 7549 chr3L 19117002 intron CG14082 - chr3L 19120776 intron CG14082 - chr3L 19124551 intron CG14082 - chr3L_34_19120001 chr3L_19120001 RAL-307_125b 2391 chr3L 19138105 19138157 chr3L 19138237 19138301 18 136 0.0 7.0 3.5 4.0 196 chr3L 19138105 intron CG14082 - chr3L 19138203 intron CG14082 - chr3L 19138301 intron CG14082 - chr3L_18_19135001 chr3L_19135001 RAL-307_125b 2392 chr3L 19208015 19208088 chr3L 19209439 19209486 Doc 18 1416 3.0 4.0 3.5 4.0 1471 chr3L 19208015 intron fz2 - chr3L 19208750 intron fz2 - chr3L 19209486 intron fz2 - chr3L_18_19205001 chr3L_19205001 RAL-307_125b 2393 chr3L 19219713 19219728 chr3L 19219839 19219844 6 124 22.0 1.0 11.5 0.5 131 chr3L 19219713 intron fz2 - chr3L 19219778 intron fz2 - chr3L 19219844 intron fz2 - chr3L_6_19215001 chr3L_19215001 RAL-307_125b 2394 chr3L 19220633 19220637 chr3L 22908066 22908067 78 3687431 35.5 43.5 39.5 1.9 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_78_21060001 chr3L_21060001 RAL-307_125b 2395 chr3L 19262162 19262236 chr3L 19262294 19262368 31 132 8.5 10.0 9.2 3.0 206 chr3L 19262162 3` UTR Bet1 + chr3L 19262265 3` UTR,3` UTR Bet1 +,Max - chr3L 19262368 3` UTR,3` UTR Bet1 +,Max - chr3L_31_19260001 chr3L_19260001 RAL-307_125b 2396 chr3L 19269770 19269846 chr3L 19270024 19270089 36 247 13.5 13.5 13.5 2.5 319 chr3L 19269770 intron CG14085 + chr3L 19269930 intron,exon CG14085 +,CG14088 - chr3L 19270089 intron,exon CG14085 +,CG14088 - chr3L_36_19265001 chr3L_19265001 RAL-307_125b 2397 chr3L 19265219 19265228 chr3L 19272769 19272827 12 7550 32.0 50.5 41.2 0.3 7608 chr3L 19265219 3` UTR,exon CG42374 +,CG9666 + chr3L 19269023 intergenic CG9629 -,CG14085 + chr3L 19272827 exon CG14085 + chr3L_12_19265001 chr3L_19265001 RAL-307_125b 2398 chr3L 19342714 19342777 chr3L 19342855 19342918 41 140 6.0 5.5 5.8 6.0 204 chr3L 19342714 3` UTR CG32206 - chr3L 19342816 3` UTR CG32206 - chr3L 19342918 3` UTR CG32206 - chr3L_41_19340001 chr3L_19340001 RAL-307_125b 2399 chr3L 19346820 19346872 chr3L 19346955 19346989 15 131 1.5 16.5 9.0 1.5 169 chr3L 19346820 intron CG32206 - chr3L 19346904 intron CG32206 - chr3L 19346989 intron CG32206 - chr3L_15_19345001 chr3L_19345001 RAL-307_125b 2400 chr3L 19365919 19365925 chr3L 19366061 19366072 6 146 1.0 18.5 9.8 0.6 153 chr3L 19365919 intron CG32206 - chr3L 19365996 intron CG32206 - chr3L 19366072 intron CG32206 - chr3L_6_19365001 chr3L_19365001 RAL-307_125b 2401 chr3L 19398895 19398930 chr3L 19403656 19403697 F-element 6 4764 5.5 5.5 5.5 0.9 4802 chr3L 19398895 intron CG32206 - chr3L 19401296 intron CG32206 - chr3L 19403697 intron CG32206 - chr3L_6_19400001 chr3L_19400001 RAL-307_125b 2402 chr3L 19430341 19430425 chr3L 19430476 19430553 25 133 7.5 11.0 9.2 2.5 212 chr3L 19430341 intergenic not near genes chr3L 19430447 intergenic not near genes chr3L 19430553 intergenic not near genes chr3L_25_19430001 chr3L_19430001 RAL-307_125b 2403 chr3L 19439129 19439192 chr3L 19439258 19439321 37 126 12.0 13.5 12.8 2.7 192 chr3L 19439129 intergenic not near genes chr3L 19439225 intergenic not near genes chr3L 19439321 intergenic not near genes chr3L_37_19435001 chr3L_19435001 RAL-307_125b 2404 chr3L 19488478 19488498 chr3L 19488610 19488630 7 132 13.0 15.5 14.2 0.5 152 chr3L 19488478 intergenic pncr009:3L -,CG32212 + chr3L 19488554 intergenic pncr009:3L -,CG32212 + chr3L 19488630 intergenic pncr009:3L -,CG32212 + chr3L_7_19485001 chr3L_19485001 RAL-307_125b 2405 chr3L 19527881 19527946 chr3L 19528010 19528075 45 129 12.5 14.0 13.2 3.2 194 chr3L 19527881 intergenic not near genes chr3L 19527978 intergenic not near genes chr3L 19528075 intergenic not near genes chr3L_45_19525001 chr3L_19525001 RAL-307_125b 2406 chr3L 19544193 19544251 chr3L 19544319 19544362 12 122 16.0 13.0 14.5 0.8 169 chr3L 19544193 intergenic CG9279 -,l(3)76BDr - chr3L 19544278 intergenic l(3)76BDr -,CG9279 - chr3L 19544362 3` UTR l(3)76BDr - chr3L_12_19540001 chr3L_19540001 RAL-307_125b 2407 chr3L 19820251 19820316 chr3L 19827850 19827915 412 27 7599 6.0 7.5 6.8 3.5 7664 chr3L 19820251 intron Deaf1 + chr3L 19824083 intron Deaf1 + chr3L 19827915 intron Deaf1 + chr3L_27_19820001 chr3L_19820001 RAL-307_125b 2408 chr3L 19846563 19846632 chr3L 19846711 19846780 38 147 6.0 10.0 8.0 4.2 217 chr3L 19846563 intron Papss + chr3L 19846672 intron Papss + chr3L 19846780 intron Papss + chr3L_38_19845001 chr3L_19845001 RAL-307_125b 2409 chr3L 19848467 19848504 chr3L 19857707 19857719 roo 15 9238 21.5 16.5 19.0 0.8 9252 chr3L 19848467 intron Papss + chr3L 19853093 intron Papss + chr3L 19857719 intron Papss + chr3L_15_19850001 chr3L_19850001 RAL-307_125b 2410 chr3L 19848508 19848532 chr3L 19857689 19857773 roo 19 9233 15.0 10.5 12.8 1.4 9265 chr3L 19848508 intron Papss + chr3L 19853140 intron Papss + chr3L 19857773 intron Papss + chr3L_19_19850001 chr3L_19850001 RAL-307_125b 2411 chr3L 19861780 19861850 chr3L 19863618 19863656 S-element 24 1834 14.5 7.5 11.0 2.0 1876 chr3L 19861780 5` UTR CR45433 + chr3L 19862718 intergenic not near genes chr3L 19863656 intergenic not near genes chr3L_24_19860001 chr3L_19860001 RAL-307_125b 2412 chr3L 19961234 19961308 chr3L 19961492 19961548 20 254 4.5 5.0 4.8 3.4 314 chr3L 19961234 intron Ac76E + chr3L 19961391 intron Ac76E + chr3L 19961548 intron Ac76E + chr3L_20_19960001 chr3L_19960001 RAL-307_125b 2413 chr3L 19981164 19981235 chr3L 19981294 19981365 31 130 9.0 11.0 10.0 2.8 201 chr3L 19981164 intergenic not near genes chr3L 19981264 intergenic CG17732 + chr3L 19981365 intergenic CG17732 + chr3L_31_19980001 chr3L_19980001 RAL-307_125b 2414 chr3L 20083395 20083421 chr3L 20083526 20083552 6 126 13.5 22.5 18.0 0.3 157 chr3L 20083395 intron sNPF-R - chr3L 20083474 intron sNPF-R - chr3L 20083552 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-307_125b 2415 chr3L 20096047 20096118 chr3L 20096201 20096267 10 144 5.5 0.0 2.8 2.6 220 chr3L 20096047 intergenic not near genes chr3L 20096157 intergenic not near genes chr3L 20096267 intergenic not near genes chr3L_10_20095001 chr3L_20095001 RAL-307_125b 2416 chr3L 20113435 20113500 chr3L 20113575 20113645 31 141 12.5 9.5 11.0 2.6 210 chr3L 20113435 intergenic not near genes chr3L 20113540 intergenic not near genes chr3L 20113645 intergenic not near genes chr3L_31_20110001 chr3L_20110001 RAL-307_125b 2417 chr3L 20113613 20113679 chr3L 20122920 20122986 roo 39 9306 10.0 10.5 10.2 3.5 9373 chr3L 20113613 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122986 intergenic not near genes chr3L_39_20115001 chr3L_20115001 RAL-307_125b 2418 chr3L 20143048 20143106 chr3L 20143168 20143236 38 128 13.0 9.5 11.2 3.1 188 chr3L 20143048 intergenic not near genes chr3L 20143142 intergenic not near genes chr3L 20143236 intergenic not near genes chr3L_38_20140001 chr3L_20140001 RAL-307_125b 2419 chr3L 20146296 20146307 chr3L 20146657 20146675 4 365 12.0 7.0 9.5 0.4 379 chr3L 20146296 intergenic not near genes chr3L 20146486 intergenic not near genes chr3L 20146675 intergenic not near genes chr3L_4_20145001 chr3L_20145001 RAL-307_125b 2420 chr3L 20146313 20146357 chr3L 20146656 20146681 8 345 7.0 6.5 6.8 1.0 368 chr3L 20146313 intergenic not near genes chr3L 20146497 intergenic not near genes chr3L 20146681 intergenic not near genes chr3L_8_20145001 chr3L_20145001 RAL-307_125b 2421 chr3L 20148238 20148315 chr3L 20148378 20148455 25 136 10.5 8.5 9.5 2.4 217 chr3L 20148238 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148455 intergenic not near genes chr3L_25_20145001 chr3L_20145001 RAL-307_125b 2422 chr3L 20212565 20212584 chr3L 20218192 20218211 mdg3 14 5627 20.5 0.5 10.5 1.2 5646 chr3L 20212565 intergenic CG7017 - chr3L 20215388 intergenic not near genes chr3L 20218211 intergenic CG6933 - chr3L_14_20215001 chr3L_20215001 RAL-307_125b 2423 chr3L 20218180 20218222 chr3L 20218346 20218388 18 165 1.0 17.5 9.2 1.8 208 chr3L 20218180 intergenic CG6933 - chr3L 20218284 intergenic CG6933 - chr3L 20218388 intergenic CG6933 - chr3L_18_20215001 chr3L_20215001 RAL-307_125b 2424 chr3L 20257287 20257292 chr3L 20258457 20258463 pogo 5 1170 33.0 13.5 23.2 0.2 1176 chr3L 20257287 intron rdgC + chr3L 20257875 intron rdgC + chr3L 20258463 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-307_125b 2425 chr3L 20257293 20257356 chr3L 20258452 20258526 pogo 28 1166 11.5 11.0 11.2 2.3 1233 chr3L 20257293 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258526 intron rdgC + chr3L_28_20255001 chr3L_20255001 RAL-307_125b 2426 chr3L 20283627 20283706 chr3L 20283761 20283840 41 133 12.5 8.5 10.5 3.6 213 chr3L 20283627 intron gogo - chr3L 20283734 intron gogo - chr3L 20283840 intron gogo - chr3L_41_20280001 chr3L_20280001 RAL-307_125b 2427 chr3L 20321108 20321132 chr3L 20342874 20342903 17.6 4 21769 17.0 66.5 41.8 0.1 21795 chr3L 20321108 exon Spn77Bb + chr3L 20332006 intergenic not near genes chr3L 20342903 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 RAL-307_125b 2428 chr3L 20345569 20345630 chr3L 20345700 20345761 30 129 14.5 12.0 13.2 2.1 192 chr3L 20345569 intergenic Rbbp5 - chr3L 20345665 intergenic Rbbp5 - chr3L 20345761 3` UTR Rbbp5 - chr3L_30_20345001 chr3L_20345001 RAL-307_125b 2429 chr3L 20386892 20386968 chr3L 20387044 20387120 41 150 8.0 15.0 11.5 3.3 228 chr3L 20386892 intron fbl + chr3L 20387006 intron fbl + chr3L 20387120 intron fbl + chr3L_41_20385001 chr3L_20385001 RAL-307_125b 2430 chr3L 20391501 20391510 chr3L 20391645 20391654 6 144 28.0 1.0 14.5 0.4 153 chr3L 20391501 intergenic fbl +,CR43944 -,CG33969 - chr3L 20391578 intergenic CG33969 -,fbl +,CR43944 - chr3L 20391654 intergenic CG33969 -,fbl +,CR43944 - chr3L_6_20390001 chr3L_20390001 RAL-307_125b 2431 chr3L 20391519 20391571 chr3L 20391637 20391650 23 138 11.0 1.0 6.0 3.3 131 chr3L 20391519 intergenic fbl +,CR43944 -,CG33969 - chr3L 20391584 intergenic CG33969 -,fbl +,CR43944 - chr3L 20391650 intergenic CG33969 -,fbl +,CR43944 - chr3L_23_20390001 chr3L_20390001 RAL-307_125b 2432 chr3L 20476714 20476782 chr3L 20484363 20484418 springer 39 7647 6.5 15.0 10.8 3.3 7704 chr3L 20476714 3` UTR isoQC + chr3L 20480566 intergenic not near genes chr3L 20484418 3` UTR ZnT77C - chr3L_39_20480001 chr3L_20480001 RAL-307_125b 2433 chr3L 20525229 20525229 chr3L 22908066 22908067 5 2382837 22.5 43.5 33.0 0.1 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-307_125b 2434 chr3L 20590037 20590084 chr3L 20590605 20590673 412 20 580 7.5 7.0 7.2 2.4 636 chr3L 20590037 intergenic not near genes chr3L 20590355 intergenic not near genes chr3L 20590673 intergenic not near genes chr3L_20_20590001 chr3L_20590001 RAL-307_125b 2435 chr3L 20739445 20739501 chr3L 20739610 20739666 19 164 8.5 9.5 9.0 1.9 221 chr3L 20739445 intron CG13252 + chr3L 20739556 intron CG13252 + chr3L 20739666 intron CG13252 + chr3L_19_20735001 chr3L_20735001 RAL-307_125b 2436 chr3L 20819579 20819655 chr3L 20819852 20819928 34 273 8.0 8.0 8.0 3.8 349 chr3L 20819579 intron Pka-R1 + chr3L 20819754 intron Pka-R1 + chr3L 20819928 intron Pka-R1 + chr3L_34_20815001 chr3L_20815001 RAL-307_125b 2437 chr3L 20821233 20821311 chr3L 20824894 20824972 NOF 41 3657 10.5 8.0 9.2 4.0 3739 chr3L 20821233 intron Pka-R1 + chr3L 20823102 intron Pka-R1 + chr3L 20824972 intron Pka-R1 + chr3L_41_20820001 chr3L_20820001 RAL-307_125b 2438 chr3L 20849223 20849290 chr3L 20849352 20849419 29 128 17.0 16.5 16.8 1.6 196 chr3L 20849223 intron CG32432 - chr3L 20849321 intron CG32432 - chr3L 20849419 intron CG32432 - chr3L_29_20845001 chr3L_20845001 RAL-307_125b 2439 chr3L 20858026 20858097 chr3L 20858175 20858246 34 148 7.0 8.5 7.8 3.9 220 chr3L 20858026 intron CG32432 - chr3L 20858136 intron CG32432 - chr3L 20858246 intron CG32432 - chr3L_34_20855001 chr3L_20855001 RAL-307_125b 2440 chr3L 20913706 20913774 chr3L 20913838 20913882 23 123 11.0 7.0 9.0 2.3 176 chr3L 20913706 intergenic CR43930 - chr3L 20913794 intergenic CR43930 - chr3L 20913882 intergenic CR43930 - chr3L_23_20910001 chr3L_20910001 RAL-307_125b 2441 chr3L 21014872 21014945 chr3L 21023403 21023467 Tirant 14 8520 7.0 7.0 7.0 1.8 8595 chr3L 21014872 intron skd - chr3L 21019170 intron skd - chr3L 21023467 intron skd - chr3L_14_21015001 chr3L_21015001 RAL-307_125b 2442 chr3L 21079796 21079812 chr3L 21079966 21080002 8 191 0.5 5.5 3.0 2.0 206 chr3L 21079796 intron ko - chr3L 21079899 intron ko - chr3L 21080002 intron ko - chr3L_8_21075001 chr3L_21075001 RAL-307_125b 2443 chr3L 21093732 21093809 chr3L 21093894 21093939 29 158 9.0 6.5 7.8 3.3 207 chr3L 21093732 intron ko - chr3L 21093836 intron ko - chr3L 21093939 intron ko - chr3L_29_21090001 chr3L_21090001 RAL-307_125b 2444 chr3L 21151822 21151856 chr3L 21156956 21156990 flea 22 5134 11.0 9.0 10.0 2.0 5168 chr3L 21151822 intron Ac78C - chr3L 21154406 intron Ac78C - chr3L 21156990 intron Ac78C - chr3L_22_21150001 chr3L_21150001 RAL-307_125b 2445 chr3L 21151857 21151881 chr3L 21156949 21157015 flea 19 5127 9.0 8.0 8.5 2.0 5158 chr3L 21151857 intron Ac78C - chr3L 21154436 intron Ac78C - chr3L 21157015 intron Ac78C - chr3L_19_21150001 chr3L_21150001 RAL-307_125b 2446 chr3L 21243738 21243745 chr3L 21251309 21251323 412 4 7579 9.0 9.0 9.0 0.4 7585 chr3L 21243738 intron Eip78C + chr3L 21247530 intron Eip78C + chr3L 21251323 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-307_125b 2447 chr3L 21274165 21274236 chr3L 21274386 21274440 35 215 13.0 9.5 11.2 2.9 275 chr3L 21274165 intron AcCoAS - chr3L 21274302 intron AcCoAS - chr3L 21274440 intron AcCoAS - chr3L_35_21270001 chr3L_21270001 RAL-307_125b 2448 chr3L 21306109 21306174 chr3L 21315318 21315361 roo 30 9207 10.0 15.0 12.5 2.2 9252 chr3L 21306109 3` UTR CG7632 + chr3L 21310735 intron Pc - chr3L 21315361 3` UTR Pc - chr3L_30_21310001 chr3L_21310001 RAL-307_125b 2449 chr3L 21319487 21319553 chr3L 21319627 21319693 29 138 11.5 10.5 11.0 2.4 206 chr3L 21319487 5` UTR Rab26 + chr3L 21319590 5` UTR Rab26 + chr3L 21319693 5` UTR Rab26 + chr3L_29_21315001 chr3L_21315001 RAL-307_125b 2450 chr3L 21372677 21372749 chr3L 21379235 21379306 McClintock 14 6558 5.5 6.5 6.0 2.0 6629 chr3L 21372677 intergenic not near genes chr3L 21375992 intergenic not near genes chr3L 21379306 intergenic not near genes chr3L_14_21375001 chr3L_21375001 RAL-307_125b 2451 chr3L 21415084 21415157 chr3L 21415220 21415290 21 130 7.5 9.0 8.2 2.3 206 chr3L 21415084 intron rgn + chr3L 21415187 intron rgn + chr3L 21415290 intron rgn + chr3L_21_21415001 chr3L_21415001 RAL-307_125b 2452 chr3L 4341330 4341333 chr3L 21448026 21448026 4 17106695 48.0 46.0 47.0 0.1 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_4_12890001 chr3L_12890001 RAL-307_125b 2453 chr3L 21498825 21498847 chr3L 21500511 21500533 1360 10 1684 12.5 14.5 13.5 0.7 1708 chr3L 21498825 5` UTR,intron CR43933 +,Glg1 - chr3L 21499679 intron Glg1 - chr3L 21500533 intron Glg1 - chr3L_10_21495001 chr3L_21495001 RAL-307_125b 2454 chr3L 21498850 21498862 chr3L 21500503 21500518 1360 5 1663 8.5 12.5 10.5 0.4 1668 chr3L 21498850 intron Glg1 - chr3L 21499684 intron Glg1 - chr3L 21500518 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-307_125b 2455 chr3L 21749283 21749318 chr3L 21754493 21754513 Doc 10 5202 10.5 6.5 8.5 1.1 5230 chr3L 21749283 intron Syn1 - chr3L 21751898 intron Syn1 - chr3L 21754513 intron Syn1 - chr3L_10_21750001 chr3L_21750001 RAL-307_125b 2456 chr3L 21749321 21749339 chr3L 21754489 21754546 Doc 7 5198 6.5 5.5 6.0 1.0 5225 chr3L 21749321 intron Syn1 - chr3L 21751934 intron Syn1 - chr3L 21754546 intron Syn1 - chr3L_7_21750001 chr3L_21750001 RAL-307_125b 2457 chr3L 21769004 21769078 chr3L 21769141 21769215 39 136 10.5 11.5 11.0 3.2 211 chr3L 21769004 intron,intron Syn1 -,CG42689 + chr3L 21769110 intron,intron Syn1 -,CG42689 + chr3L 21769215 intron,intron Syn1 -,CG42689 + chr3L_39_21765001 chr3L_21765001 RAL-307_125b 2458 chr3L 21770002 21770019 chr3L 21770129 21770156 7 130 10.5 7.0 8.8 0.7 154 chr3L 21770002 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770079 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770156 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_7_21770001 chr3L_21770001 RAL-307_125b 2459 chr3L 21770020 21770039 chr3L 21770128 21770176 6 123 7.0 7.0 7.0 0.8 156 chr3L 21770020 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770098 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770176 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_6_21770001 chr3L_21770001 RAL-307_125b 2460 chr3L 21776625 21776690 chr3L 21776758 21776827 18 133 7.5 5.0 6.2 2.5 202 chr3L 21776625 intron,intron CG42689 +,CG42552 + chr3L 21776726 intron,intron CG42689 +,CG42552 + chr3L 21776827 exon,intron CG42689 +,CG42552 + chr3L_18_21775001 chr3L_21775001 RAL-307_125b 2461 chr3L 21809934 21809968 chr3L 21810071 21810096 8 131 9.5 12.0 10.8 0.7 162 chr3L 21809934 intron eg + chr3L 21810015 intron eg + chr3L 21810096 intron eg + chr3L_8_21810001 chr3L_21810001 RAL-307_125b 2462 chr3L 21836683 21836753 chr3L 21836819 21836824 25 131 12.0 7.0 9.5 2.4 141 chr3L 21836683 3` UTR,3` UTR Nopp140 +,P5CDh1 - chr3L 21836754 3` UTR P5CDh1 - chr3L 21836824 3` UTR P5CDh1 - chr3L_25_21835001 chr3L_21835001 RAL-307_125b 2463 chr3L 21849450 21849472 chr3L 21849582 21849604 15 132 17.5 9.5 13.5 1.0 154 chr3L 21849450 intron mub + chr3L 21849527 intron mub + chr3L 21849604 intron mub + chr3L_15_21845001 chr3L_21845001 RAL-307_125b 2464 chr3L 21849474 21849532 chr3L 21849581 21849664 21 129 6.0 9.5 7.8 2.4 190 chr3L 21849474 intron mub + chr3L 21849569 intron mub + chr3L 21849664 intron mub + chr3L_21_21845001 chr3L_21845001 RAL-307_125b 2465 chr3L 21852212 21852248 chr3L 21852355 21852381 6 141 8.5 4.5 6.5 0.8 169 chr3L 21852212 intron mub + chr3L 21852296 intron mub + chr3L 21852381 intron mub + chr3L_6_21850001 chr3L_21850001 RAL-307_125b 2466 chr3L 21852260 21852279 chr3L 21852349 21852422 20 120 3.0 3.0 3.0 5.0 162 chr3L 21852260 intron mub + chr3L 21852341 intron mub + chr3L 21852422 intron mub + chr3L_20_21850001 chr3L_21850001 RAL-307_125b 2467 chr3L 21874956 21875026 chr3L 21875163 21875227 40 206 8.0 10.5 9.2 3.9 271 chr3L 21874956 intron mub + chr3L 21875092 intron mub + chr3L 21875227 intron mub + chr3L_40_21875001 chr3L_21875001 RAL-307_125b 2468 chr3L 21900981 21900995 chr3L 21901124 21901138 6 143 11.0 11.5 11.2 0.5 157 chr3L 21900981 intron mub + chr3L 21901060 intron mub + chr3L 21901138 intron mub + chr3L_6_21900001 chr3L_21900001 RAL-307_125b 2469 chr3L 21901003 21901037 chr3L 21901120 21901180 15 134 5.5 10.0 7.8 1.7 177 chr3L 21901003 intron mub + chr3L 21901092 intron mub + chr3L 21901180 intron mub + chr3L_15_21900001 chr3L_21900001 RAL-307_125b 2470 chr3L 21952406 21952482 chr3L 21953194 21953264 transib1 32 790 10.0 11.0 10.5 2.8 858 chr3L 21952406 intergenic not near genes chr3L 21952835 intergenic not near genes chr3L 21953264 intergenic not near genes chr3L_32_21950001 chr3L_21950001 RAL-307_125b 2471 chr3L 22016319 22016390 chr3L 22016485 22016556 49 161 11.0 10.0 10.5 4.3 237 chr3L 22016319 intergenic not near genes chr3L 22016438 intergenic not near genes chr3L 22016556 intergenic not near genes chr3L_49_22015001 chr3L_22015001 RAL-307_125b 2472 chr3L 22033646 22033719 chr3L 22033774 22033847 34 127 7.5 10.0 8.8 3.5 201 chr3L 22033646 intergenic not near genes chr3L 22033746 intergenic not near genes chr3L 22033847 intergenic not near genes chr3L_34_22030001 chr3L_22030001 RAL-307_125b 2473 chr3L 22046138 22046210 chr3L 22046291 22046349 52 152 6.0 13.0 9.5 5.0 211 chr3L 22046138 intron Oct-TyrR + chr3L 22046244 intron Oct-TyrR + chr3L 22046349 intron Oct-TyrR + chr3L_52_22045001 chr3L_22045001 RAL-307_125b 2474 chr3L 22099639 22099684 chr3L 22105875 22105920 3S18 29 6236 9.0 13.0 11.0 2.4 6281 chr3L 22099639 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105920 intergenic not near genes chr3L_29_22100001 chr3L_22100001 RAL-307_125b 2475 chr3L 22099687 22099696 chr3L 22105863 22105932 3S18 10 6230 7.5 11.0 9.2 1.0 6245 chr3L 22099687 intergenic not near genes chr3L 22102810 intergenic not near genes chr3L 22105932 intergenic not near genes chr3L_10_22100001 chr3L_22100001 RAL-307_125b 2476 chr3L 22124901 22124918 chr3L 22125107 22125124 8 206 25.0 10.0 17.5 0.4 223 chr3L 22124901 intergenic not near genes chr3L 22125012 intergenic not near genes chr3L 22125124 intergenic not near genes chr3L_8_22125001 chr3L_22125001 RAL-307_125b 2477 chr3L 22124920 22124971 chr3L 22125104 22125115 26 196 15.5 9.0 12.2 2.0 195 chr3L 22124920 intergenic not near genes chr3L 22125018 intergenic not near genes chr3L 22125115 intergenic not near genes chr3L_26_22125001 chr3L_22125001 RAL-307_125b 2478 chr3L 22130450 22130521 chr3L 22130646 22130717 23 196 4.5 4.0 4.2 4.4 267 chr3L 22130450 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130717 intergenic not near genes chr3L_23_22130001 chr3L_22130001 RAL-307_125b 2479 chr3L 22170005 22170059 chr3L 22170150 22170174 20 153 8.0 0.5 4.2 3.8 169 chr3L 22170005 intron olf413 + chr3L 22170090 intron olf413 + chr3L 22170174 intron olf413 + chr3L_20_22170001 chr3L_22170001 RAL-307_125b 2480 chr3L 22361890 22361970 chr3L 22362017 22362097 36 122 12.5 8.0 10.2 3.2 207 chr3L 22361890 intron Ten-m - chr3L 22361994 intron Ten-m - chr3L 22362097 intron Ten-m - chr3L_36_22360001 chr3L_22360001 RAL-307_125b 2481 chr3L 22395569 22395628 chr3L 22395682 22395761 33 126 7.5 5.0 6.2 4.6 192 chr3L 22395569 intron Ten-m - chr3L 22395665 intron Ten-m - chr3L 22395761 intron Ten-m - chr3L_33_22395001 chr3L_22395001 RAL-307_125b 2482 chr3L 22411363 22411390 chr3L 22411454 22411517 6 103 4.5 2.5 3.5 1.3 154 chr3L 22411363 intergenic not near genes chr3L 22411440 intergenic not near genes chr3L 22411517 intergenic not near genes chr3L_6_22410001 chr3L_22410001 RAL-307_125b 2483 chr3L 22431682 22431714 chr3L 22432297 22432316 18 613 6.5 8.0 7.2 2.2 634 chr3L 22431682 intergenic not near genes chr3L 22431999 intergenic not near genes chr3L 22432316 intergenic not near genes chr3L_18_22430001 chr3L_22430001 RAL-307_125b 2484 chr3L 22522651 22522722 chr3L 22522778 22522843 24 124 9.5 4.0 6.8 3.1 192 chr3L 22522651 intergenic not near genes chr3L 22522747 intergenic not near genes chr3L 22522843 intergenic not near genes chr3L_24_22520001 chr3L_22520001 RAL-307_125b 2485 chr3L 22555726 22555800 chr3L 22563246 22563281 blood 28 7508 8.0 6.5 7.2 3.4 7555 chr3L 22555726 intergenic not near genes chr3L 22559504 intergenic not near genes chr3L 22563281 intergenic not near genes chr3L_28_22555001 chr3L_22555001 RAL-307_125b 2486 chr3L 22577590 22577616 chr3L 22582420 22582447 Doc 4 4834 10.0 9.5 9.8 0.4 4857 chr3L 22577590 intergenic not near genes chr3L 22580018 intergenic not near genes chr3L 22582447 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-307_125b 2487 chr3L 22577627 22577639 chr3L 22582415 22582477 Doc 5 4825 6.5 9.0 7.8 0.6 4850 chr3L 22577627 intergenic not near genes chr3L 22580052 intergenic not near genes chr3L 22582477 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-307_125b 2488 chr3L 22587167 22587186 chr3L 22587314 22587333 11 146 27.0 17.0 22.0 0.5 166 chr3L 22587167 intron CG14459 - chr3L 22587250 intron CG14459 - chr3L 22587333 intron CG14459 - chr3L_11_22585001 chr3L_22585001 RAL-307_125b 2489 chr3L 22587189 22587240 chr3L 22587310 22587362 30 144 13.0 14.5 13.8 2.0 173 chr3L 22587189 intron CG14459 - chr3L 22587276 intron CG14459 - chr3L 22587362 intron CG14459 - chr3L_30_22585001 chr3L_22585001 RAL-307_125b 2490 chr3L 22617144 22617219 chr3L 22624646 22624704 blood 27 7497 8.5 12.5 10.5 2.3 7560 chr3L 22617144 intron CG14459 - chr3L 22620924 intron CG14459 - chr3L 22624704 intron CG14459 - chr3L_27_22620001 chr3L_22620001 RAL-307_125b 2491 chr3L 22659012 22659039 chr3L 22659140 22659156 9 126 19.5 8.0 13.8 0.6 144 chr3L 22659012 intergenic not near genes chr3L 22659084 intergenic not near genes chr3L 22659156 intergenic not near genes chr3L_9_22655001 chr3L_22655001 RAL-307_125b 2492 chr3L 22659047 22659086 chr3L 22659135 22659170 24 110 14.0 9.5 11.8 1.9 123 chr3L 22659047 intergenic not near genes chr3L 22659108 intergenic not near genes chr3L 22659170 intergenic not near genes chr3L_24_22655001 chr3L_22655001 RAL-307_125b 2493 chr3L 22797291 22797363 chr3L 22797434 22797476 41 139 7.0 9.0 8.0 4.6 185 chr3L 22797291 3` UTR jim - chr3L 22797384 3` UTR jim - chr3L 22797476 3` UTR jim - chr3L_41_22795001 chr3L_22795001 RAL-307_125b 2494 chr3L 22853418 22853435 chr3L 22853555 22853572 10 137 21.0 16.5 18.8 0.5 154 chr3L 22853418 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853495 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853572 5` UTR CR43426 + chr3L_10_22850001 chr3L_22850001 RAL-307_125b 2495 chr3L 22853436 22853713 chr3L 22853551 22853829 60 132 9.0 14.0 11.5 4.8 393 chr3L 22853436 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853632 5` UTR CR43426 + chr3L 22853829 5` UTR CR43426 + chr3L_60_22850001 chr3L_22850001 RAL-307_125b 2496 chr3L 22865944 22866004 chr3L 22867127 22867187 Doc 40 1182 18.0 18.0 18.0 2.1 1243 chr3L 22865944 exon CG33170 + chr3L 22866566 intron CG33170 + chr3L 22867187 intron CG33170 + chr3L_40_22865001 chr3L_22865001 RAL-307_125b 2497 chr3L 9307795 9307796 chr3L 22908066 22908066 4 13600270 49.0 43.5 46.2 0.1 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-307_125b 2498 chr3L 19220633 19220637 chr3L 22908066 22908066 35 3687432 35.5 43.5 39.5 0.9 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_35_21060001 chr3L_21060001 RAL-307_125b 2499 chr3L 20525228 20525230 chr3L 22908066 22908066 16 2382837 22.5 43.5 33.0 0.5 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_16_21715001 chr3L_21715001 RAL-307_125b 2500 chr3L 19220633 19220637 chr3L 22908067 22908067 22 3687432 35.5 43.5 39.5 0.5 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_22_21060001 chr3L_21060001 RAL-307_125b 2501 chr3L 22936694 22936747 chr3L 22938108 22938173 19 1425 56.0 59.0 57.5 0.3 1479 chr3L 22936694 intergenic not near genes chr3L 22937434 intergenic not near genes chr3L 22938173 intergenic not near genes chr3L_19_22935001 chr3L_22935001 RAL-307_125b 2502 chr3L 22982428 22982478 chr3L 22982876 22982926 INE-1 24 447 12.5 14.5 13.5 1.7 498 chr3L 22982428 intergenic not near genes chr3L 22982677 intergenic not near genes chr3L 22982926 intergenic not near genes chr3L_24_22980001 chr3L_22980001 RAL-307_125b 2503 chr3L 22989820 22989889 chr3L 22996844 22996882 297 46 7021 10.0 11.0 10.5 4.0 7062 chr3L 22989820 intergenic not near genes chr3L 22993351 intergenic not near genes chr3L 22996882 intergenic not near genes chr3L_46_22990001 chr3L_22990001 RAL-307_125b 2504 chr3L 23008179 23008215 chr3L 23008284 23008341 9 118 12.5 12.5 12.5 0.7 162 chr3L 23008179 intron nrm + chr3L 23008260 intron nrm + chr3L 23008341 intron nrm + chr3L_9_23005001 chr3L_23005001 RAL-307_125b 2505 chr3L 23042183 23042249 chr3L 23048986 23049052 gypsy6 17 6800 10.0 8.5 9.2 1.7 6869 chr3L 23042183 intergenic not near genes chr3L 23045618 intergenic not near genes chr3L 23049052 intergenic not near genes chr3L_17_23045001 chr3L_23045001 RAL-307_125b 2506 chr3L 23101238 23101299 chr3L 23101499 23101541 8 257 19.5 0.5 10.0 0.7 303 chr3L 23101238 intron CkIIalpha + chr3L 23101390 intron CkIIalpha + chr3L 23101541 intron CkIIalpha + chr3L_8_23100001 chr3L_23100001 RAL-307_125b 2507 chr3L 23165871 23165902 chr3L 23173367 23173398 Quasimodo 7 7493 12.0 9.0 10.5 0.6 7527 chr3L 23165871 intergenic not near genes chr3L 23169634 intergenic not near genes chr3L 23173398 intergenic not near genes chr3L_7_23165001 chr3L_23165001 RAL-307_125b 2508 chr3L 23182215 23182290 chr3L 23182379 23182420 28 155 10.5 8.5 9.5 2.7 205 chr3L 23182215 intron CG34031 + chr3L 23182318 intron CG34031 + chr3L 23182420 intron CG34031 + chr3L_28_23180001 chr3L_23180001 RAL-307_125b 2509 chr3L 23205402 23205445 chr3L 23205682 23205725 20 277 21.0 12.0 16.5 1.1 323 chr3L 23205402 intergenic not near genes chr3L 23205564 intergenic not near genes chr3L 23205725 intergenic not near genes chr3L_20_23205001 chr3L_23205001 RAL-307_125b 2510 chr3L 23239766 23239812 chr3L 23240306 23240352 13 539 3.5 5.5 4.5 2.4 586 chr3L 23239766 intron nAChRalpha4 + chr3L 23240059 intron nAChRalpha4 + chr3L 23240352 intron nAChRalpha4 + chr3L_13_23240001 chr3L_23240001 RAL-307_125b 2511 chr3L 23402271 23402317 chr3L 23402383 23402443 15 119 6.0 6.0 6.0 2.1 172 chr3L 23402271 intergenic not near genes chr3L 23402357 intergenic not near genes chr3L 23402443 intergenic not near genes chr3L_15_23400001 chr3L_23400001 RAL-307_125b 2512 chr3L 23665486 23665527 chr3L 23665626 23665667 gypsy8 14 140 47.5 42.5 45.0 0.3 181 chr3L 23665486 intron AGO3 + chr3L 23665576 intron AGO3 + chr3L 23665667 intron AGO3 + chr3L_14_23665001 chr3L_23665001 RAL-307_125b 2513 chr3L 23848805 23848827 chr3L 23849678 23849701 R1A1-element 5 873 8.5 8.5 8.5 0.5 896 chr3L 23848805 intron CG40470 - chr3L 23849253 intron CG40470 - chr3L 23849701 intron CG40470 - chr3L_5_23845001 chr3L_23845001 RAL-307_125b 2514 chr3L 23875486 23875552 chr3L 23875617 23875665 15 126 6.5 5.0 5.8 2.2 179 chr3L 23875486 intron CG40470 - chr3L 23875576 intron CG40470 - chr3L 23875665 intron CG40470 - chr3L_15_23875001 chr3L_23875001 RAL-307_125b 2515 chr3L 24012367 24012398 chr3L 24020758 24020789 roo 11 8390 15.0 12.0 13.5 0.8 8422 chr3L 24012367 intergenic not near genes chr3L 24016578 intergenic not near genes chr3L 24020789 intergenic not near genes chr3L_11_24015001 chr3L_24015001 RAL-307_125b 2516 chr3L 24012401 24012429 chr3L 24020752 24020820 roo 13 8386 8.0 11.0 9.5 1.2 8419 chr3L 24012401 intergenic not near genes chr3L 24016610 intergenic not near genes chr3L 24020820 intergenic not near genes chr3L_13_24015001 chr3L_24015001 RAL-307_125b 2517 chr3L 24088127 24088129 chr3L 27357746 27357748 4 3269619 37.0 53.5 45.2 0.1 3269621 chr3L 24088127 intron Snap25 + chr3L 25722938 intergenic not near genes chr3L 27357748 intron Dbp80 + chr3L_4_25720001 chr3L_25720001 RAL-307_125b 2518 chr3L 24168766 24168822 chr3L 24176128 24176171 ZAM 13 7358 6.5 6.0 6.2 1.8 7405 chr3L 24168766 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176171 intron Snap25 + chr3L_13_24170001 chr3L_24170001 RAL-307_125b 2519 chr3L 24791849 24791911 chr3L 24796678 24796702 Doc 15 4825 11.5 6.5 9.0 1.5 4853 chr3L 24791849 intergenic not near genes chr3L 24794276 intergenic not near genes chr3L 24796702 intergenic not near genes chr3L_15_24790001 chr3L_24790001 RAL-307_125b 2520 chr3L 18198930 18198930 chr3L 24821492 24821492 4 6622562 3.5 27.5 15.5 0.2 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-307_125b 2521 chr3L 25331599 25331649 chr3L 25331727 25331739 12 127 4.0 2.5 3.2 2.9 140 chr3L 25331599 intergenic not near genes chr3L 25331669 intergenic not near genes chr3L 25331739 intergenic not near genes chr3L_12_25330001 chr3L_25330001 RAL-307_125b 2522 chr3L 25463984 25464085 chr3L 25464115 25464188 14 130 2.5 4.0 3.2 3.3 204 chr3L 25463984 intergenic not near genes chr3L 25464086 intergenic not near genes chr3L 25464188 intergenic not near genes chr3L_14_25460001 chr3L_25460001 RAL-307_125b 2523 chr3L 25512788 25512803 chr3L 25512916 25512931 6 128 12.0 18.0 15.0 0.4 143 chr3L 25512788 intron CG41343 - chr3L 25512860 intron CG41343 - chr3L 25512931 intron CG41343 - chr3L_6_25510001 chr3L_25510001 RAL-307_125b 2524 chr3L 25513534 25513602 chr3L 25513663 25513671 24 123 6.5 7.0 6.8 3.1 137 chr3L 25513534 intron CG41343 - chr3L 25513602 intron CG41343 - chr3L 25513671 intron CG41343 - chr3L_24_25510001 chr3L_25510001 RAL-307_125b 2525 chr3L 25627825 25627827 chr3L 25627950 25627963 5 133 10.0 19.5 14.8 0.3 138 chr3L 25627825 intron CG41343 - chr3L 25627894 intron CG41343 - chr3L 25627963 intron CG41343 - chr3L_5_25625001 chr3L_25625001 RAL-307_125b 2526 chr3L 25628462 25628499 chr3L 25633283 25633317 F-element 12 4816 12.0 7.5 9.8 1.1 4855 chr3L 25628462 intron CG41343 - chr3L 25630890 intron CG41343 - chr3L 25633317 intron CG41343 - chr3L_12_25630001 chr3L_25630001 RAL-307_125b 2527 chr3L 25628500 25628520 chr3L 25633276 25633341 F-element 12 4817 7.5 7.0 7.2 1.5 4841 chr3L 25628500 intron CG41343 - chr3L 25630920 intron CG41343 - chr3L 25633341 intron CG41343 - chr3L_12_25630001 chr3L_25630001 RAL-307_125b 2528 chr3L 25952263 25952273 chr3L 25989360 25989373 7 37101 6.5 49.0 27.8 0.2 37110 chr3L 25952263 intron CG40178 - chr3L 25970818 intron CG40178 - chr3L 25989373 intron CG40178 - chr3L_7_25970001 chr3L_25970001 RAL-307_125b 2529 chr3L 26009376 26009417 chr3L 26009517 26009558 10 140 21.5 8.0 14.8 0.6 182 chr3L 26009376 intron CG40178 - chr3L 26009467 intron CG40178 - chr3L 26009558 intron CG40178 - chr3L_10_26005001 chr3L_26005001 RAL-307_125b 2530 chr3L 26694923 26694951 chr3L 26695023 26695081 6 114 7.0 13.0 10.0 0.5 158 chr3L 26694923 intergenic not near genes chr3L 26695002 intergenic not near genes chr3L 26695081 intergenic not near genes chr3L_6_26690001 chr3L_26690001 RAL-307_125b 2531 chr3L 23941232 23941238 chr3L 26882296 26882297 1360 7 2941060 39.0 12.0 25.5 0.3 2941065 chr3L 23941232 intron CG40470 - chr3L 25411764 intergenic not near genes chr3L 26882297 intergenic not near genes chr3L_7_25410001 chr3L_25410001 RAL-307_125b 2532 chr3L 23941239 23941245 chr3L 26882298 26882300 1360 8 2941058 39.0 11.0 25.0 0.3 2941061 chr3L 23941239 intron CG40470 - chr3L 25411770 intergenic not near genes chr3L 26882300 intergenic not near genes chr3L_8_25410001 chr3L_25410001 RAL-307_125b 2533 chr3L 27356070 27356097 chr3L 27357319 27357346 1360 15 1249 10.5 1.5 6.0 2.1 1276 chr3L 27356070 intron Dbp80 + chr3L 27356708 intron Dbp80 + chr3L 27357346 intron Dbp80 + chr3L_15_27355001 chr3L_27355001 RAL-307_125b 2534 chr3L 27356098 27356118 chr3L 27357315 27357338 1360 5 1234 9.0 1.5 5.2 0.8 1240 chr3L 27356098 intron Dbp80 + chr3L 27356718 intron Dbp80 + chr3L 27357338 intron Dbp80 + chr3L_5_27355001 chr3L_27355001 RAL-307_125b 2535 chr3L 27368835 27368842 chr3L 27369430 27369437 4 595 22.0 12.0 17.0 0.2 602 chr3L 27368835 intron Dbp80 + chr3L 27369136 intron Dbp80 + chr3L 27369437 intron Dbp80 + chr3L_4_27365001 chr3L_27365001 RAL-307_125b 2536 chr3L 27368843 27368897 chr3L 27369428 27369493 21 595 10.5 12.0 11.2 1.7 650 chr3L 27368843 intron Dbp80 + chr3L 27369168 intron Dbp80 + chr3L 27369493 intron Dbp80 + chr3L_21_27365001 chr3L_27365001 RAL-307_125b 2537 chr3L 27390673 27390704 chr3L 27390801 27390803 7 123 30.0 35.5 32.8 0.2 130 chr3L 27390673 intron Dbp80 + chr3L 27390738 intron Dbp80 + chr3L 27390803 intron Dbp80 + chr3L_7_27390001 chr3L_27390001 RAL-307_125b 2538 chr3L 27714748 27714826 chr3L 27714891 27714969 35 137 8.5 5.0 6.8 4.5 221 chr3L 27714748 intergenic not near genes chr3L 27714858 intergenic not near genes chr3L 27714969 intergenic not near genes chr3L_35_27710001 chr3L_27710001 RAL-307_125b 2539 chr3L 27967530 27967601 chr3L 27971644 27971715 28 4115 64.5 63.0 63.8 0.4 4185 chr3L 27967530 exon CG17514 - chr3L 27969622 exon CG17514 - chr3L 27971715 exon CG17514 - chr3L_28_27965001 chr3L_27965001 RAL-307_125b 2540 chr3L 27972677 27972684 chr3L 27972819 27972826 4 142 67.5 38.5 53.0 0.1 149 chr3L 27972677 exon CG17514 - chr3L 27972752 exon CG17514 - chr3L 27972826 exon CG17514 - chr3L_4_27970001 chr3L_27970001 RAL-307_125b 2541 chr3L 27972688 27972727 chr3L 27972815 27972868 21 140 55.0 38.0 46.5 0.4 180 chr3L 27972688 exon CG17514 - chr3L 27972778 exon CG17514 - chr3L 27972868 exon CG17514 - chr3L_21_27970001 chr3L_27970001 RAL-307_125b 2542 chr3L 27972732 27972843 chr3L 27972804 27972958 13 125 38.0 40.5 39.2 0.3 226 chr3L 27972732 exon CG17514 - chr3L 27972845 exon CG17514 - chr3L 27972958 exon CG17514 - chr3L_13_27970001 chr3L_27970001 RAL-307_125b 2543 chr3L 27971586 27971657 chr3L 27972866 27972962 25 1292 64.0 37.5 50.8 0.5 1376 chr3L 27971586 exon CG17514 - chr3L 27972274 exon CG17514 - chr3L 27972962 exon CG17514 - chr3L_25_27970001 chr3L_27970001 RAL-307_125b 2544 chr3L 27980647 27980725 chr3L 27985495 27985573 Doc 31 4848 8.0 7.5 7.8 3.5 4926 chr3L 27980647 intron CG17514 - chr3L 27983110 intron CG17514 - chr3L 27985573 intron CG17514 - chr3L_31_27980001 chr3L_27980001 RAL-307_125b 2545 chr3R 97129 97132 chr3R 98954 98957 1360 5 1824 20.5 0.0 10.2 0.4 1828 chr3R 97129 intergenic not near genes chr3R 98043 intergenic not near genes chr3R 98957 intergenic not near genes chr3R_5_95001 chr3R_95001 RAL-307_125b 2546 chr3R 444021 444038 chr3R 444135 444169 4 122 41.0 35.0 38.0 0.1 148 chr3R 444021 intergenic not near genes chr3R 444095 intergenic not near genes chr3R 444169 intergenic not near genes chr3R_4_440001 chr3R_440001 RAL-307_125b 2547 chr3R 1021773 1021838 chr3R 1021977 1022042 21 207 48.0 44.5 46.2 0.4 269 chr3R 1021773 intergenic not near genes chr3R 1021908 intergenic not near genes chr3R 1022042 intergenic not near genes chr3R_21_1020001 chr3R_1020001 RAL-307_125b 2548 chr3R 1062344 1062410 chr3R 1062552 1062618 19 205 6.0 7.0 6.5 2.5 274 chr3R 1062344 intron CG15831 + chr3R 1062481 intron CG15831 + chr3R 1062618 intron CG15831 + chr3R_19_1060001 chr3R_1060001 RAL-307_125b 2549 chr3R 1443430 1443459 chr3R 1443560 1443589 8 126 4.5 8.0 6.2 1.1 159 chr3R 1443430 intron CG40155 + chr3R 1443510 intron CG40155 + chr3R 1443589 intron CG40155 + chr3R_8_1440001 chr3R_1440001 RAL-307_125b 2550 chr3R 1521172 1521175 chr3R 1521310 1521313 4 138 22.5 24.5 23.5 0.2 141 chr3R 1521172 intergenic not near genes chr3R 1521242 intergenic not near genes chr3R 1521313 intergenic not near genes chr3R_4_1520001 chr3R_1520001 RAL-307_125b 2551 chr3R 1939005 1939075 chr3R 1939148 1939219 27 143 5.5 7.0 6.2 3.8 214 chr3R 1939005 intergenic not near genes chr3R 1939112 intergenic not near genes chr3R 1939219 intergenic not near genes chr3R_27_1935001 chr3R_1935001 RAL-307_125b 2552 chr3R 2534088 2534160 chr3R 2541707 2541711 15 7605 20.0 17.5 18.8 0.8 7623 chr3R 2534088 intergenic not near genes chr3R 2537900 intergenic not near genes chr3R 2541711 intergenic not near genes chr3R_15_2535001 chr3R_2535001 RAL-307_125b 2553 chr3R 3267261 3267271 chr3R 3267407 3267457 12 141 27.5 37.0 32.2 0.4 196 chr3R 3267261 intergenic not near genes chr3R 3267359 intergenic not near genes chr3R 3267457 intergenic not near genes chr3R_12_3265001 chr3R_3265001 RAL-307_125b 2554 chr3R 3752692 3752758 chr3R 3752825 3752882 34 131 9.0 9.5 9.2 3.3 190 chr3R 3752692 intergenic CG41128 + chr3R 3752787 intergenic CG41128 + chr3R 3752882 intergenic not near genes chr3R_34_3750001 chr3R_3750001 RAL-307_125b 2555 chr3R 4063760 4063818 chr3R 4069090 4069105 15 5316 14.5 37.0 25.8 0.6 5345 chr3R 4063760 intergenic not near genes chr3R 4066432 intergenic not near genes chr3R 4069105 intergenic not near genes chr3R_15_4065001 chr3R_4065001 RAL-307_125b 2556 chr3R 4078222 4078239 chr3R 4079897 4079914 INE-1 5 1675 46.5 62.0 54.2 0.1 1692 chr3R 4078222 5` UTR CG42402 + chr3R 4079068 intron CG42402 + chr3R 4079914 intron CG42402 + chr3R_5_4075001 chr3R_4075001 RAL-307_125b 2557 chr3R 4105004 4105051 chr3R 4110258 4110305 copia 8 5249 9.5 7.5 8.5 0.8 5301 chr3R 4105004 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110305 intergenic not near genes chr3R_8_4105001 chr3R_4105001 RAL-307_125b 2558 chr3R 4206027 4206093 chr3R 4211652 4211718 mdg3 34 5623 14.5 7.5 11.0 2.8 5691 chr3R 4206027 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211718 intron CG14636 - chr3R_34_4205001 chr3R_4205001 RAL-307_125b 2559 chr3R 4249896 4249965 chr3R 4250024 4250098 18 130 7.5 13.5 10.5 1.6 202 chr3R 4249896 intron TwdlG - chr3R 4249997 5` UTR TwdlG - chr3R 4250098 5` UTR TwdlG - chr3R_18_4245001 chr3R_4245001 RAL-307_125b 2560 chr3R 4250890 4250905 chr3R 4251031 4251041 4 140 12.5 12.5 12.5 0.3 151 chr3R 4250890 5` UTR TwdlG - chr3R 4250966 5` UTR TwdlG - chr3R 4251041 5` UTR TwdlG - chr3R_4_4250001 chr3R_4250001 RAL-307_125b 2561 chr3R 4250906 4250959 chr3R 4251027 4251066 17 122 6.5 12.5 9.5 1.6 160 chr3R 4250906 5` UTR TwdlG - chr3R 4250986 5` UTR TwdlG - chr3R 4251066 5` UTR TwdlG - chr3R_17_4250001 chr3R_4250001 RAL-307_125b 2562 chr3R 4366713 4366782 chr3R 4375146 4375213 roo 35 8431 10.5 8.5 9.5 3.3 8500 chr3R 4366713 3` UTR CG1090 + chr3R 4370963 intergenic not near genes chr3R 4375213 5` UTR CR44922 + chr3R_35_4370001 chr3R_4370001 RAL-307_125b 2563 chr3R 4376514 4376573 chr3R 4377013 4377072 39 498 13.0 12.5 12.8 2.8 558 chr3R 4376514 5` UTR CR44922 + chr3R 4376793 5` UTR CR44922 + chr3R 4377072 5` UTR CR44922 + chr3R_39_4375001 chr3R_4375001 RAL-307_125b 2564 chr3R 4408374 4408436 chr3R 4412728 4412765 Juan 30 4353 9.5 11.5 10.5 2.6 4391 chr3R 4408374 intron CG32944 - chr3R 4410570 intron CG32944 - chr3R 4412765 intron CG32944 - chr3R_30_4410001 chr3R_4410001 RAL-307_125b 2565 chr3R 4420755 4420822 chr3R 4420881 4420926 9 123 13.0 11.5 12.2 0.7 171 chr3R 4420755 intergenic not near genes chr3R 4420840 intergenic not near genes chr3R 4420926 intergenic not near genes chr3R_9_4420001 chr3R_4420001 RAL-307_125b 2566 chr3R 4538831 4538906 chr3R 4540141 4540186 1360 4 1302 5.0 11.0 8.0 0.4 1355 chr3R 4538831 intron CG34357 - chr3R 4539508 intron CG34357 - chr3R 4540186 intron CG34357 - chr3R_4_4535001 chr3R_4535001 RAL-307_125b 2567 chr3R 4609506 4609578 chr3R 4610720 4610751 1360 29 1211 12.0 20.0 16.0 1.7 1245 chr3R 4609506 intergenic not near genes chr3R 4610128 intergenic not near genes chr3R 4610751 intergenic not near genes chr3R_29_4610001 chr3R_4610001 RAL-307_125b 2568 chr3R 4657230 4657273 chr3R 4657584 4657627 11 350 6.5 8.5 7.5 1.3 397 chr3R 4657230 intron spartin + chr3R 4657428 intron spartin + chr3R 4657627 exon spartin + chr3R_11_4655001 chr3R_4655001 RAL-307_125b 2569 chr3R 4680663 4680741 chr3R 4680792 4680853 43 126 12.5 13.0 12.8 3.1 190 chr3R 4680663 intron CG43427 + chr3R 4680758 intron CG43427 + chr3R 4680853 intron CG43427 + chr3R_43_4680001 chr3R_4680001 RAL-307_125b 2570 chr3R 4745545 4745620 chr3R 4745677 4745715 11 124 6.5 0.0 3.2 2.6 170 chr3R 4745545 intron tacc - chr3R 4745630 intron tacc - chr3R 4745715 intron tacc - chr3R_11_4745001 chr3R_4745001 RAL-307_125b 2571 chr3R 4753209 4753224 chr3R 4757562 4757567 F-element 6 4351 18.0 8.0 13.0 0.4 4358 chr3R 4753209 intron,intron atms +,CG44098 - chr3R 4755388 intron,intron atms +,CG44098 - chr3R 4757567 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 RAL-307_125b 2572 chr3R 4753225 4753254 chr3R 4757548 4757607 F-element 9 4348 12.0 7.0 9.5 0.9 4382 chr3R 4753225 intron,intron atms +,CG44098 - chr3R 4755416 intron,intron atms +,CG44098 - chr3R 4757607 intron,exon atms +,CG44098 - chr3R_9_4755001 chr3R_4755001 RAL-307_125b 2573 chr3R 4762072 4762089 chr3R 4762461 4762478 5 389 6.0 16.5 11.2 0.4 406 chr3R 4762072 intron,intron atms +,CG44098 - chr3R 4762275 intron,intron atms +,CG44098 - chr3R 4762478 intron,intron atms +,CG44098 - chr3R_5_4760001 chr3R_4760001 RAL-307_125b 2574 chr3R 4769131 4769177 chr3R 4769237 4769294 14 124 5.0 12.0 8.5 1.5 163 chr3R 4769131 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769294 intron,intron atms +,CG44098 - chr3R_14_4765001 chr3R_4765001 RAL-307_125b 2575 chr3R 4861521 4861589 chr3R 4861651 4861720 20 123 7.0 9.0 8.0 2.2 199 chr3R 4861521 intron opa + chr3R 4861620 intron opa + chr3R 4861720 intron opa + chr3R_20_4860001 chr3R_4860001 RAL-307_125b 2576 chr3R 4887446 4887505 chr3R 4894872 4894932 rover 11 7423 6.0 7.5 6.8 1.4 7486 chr3R 4887446 intergenic not near genes chr3R 4891189 intergenic not near genes chr3R 4894932 intergenic not near genes chr3R_11_4890001 chr3R_4890001 RAL-307_125b 2577 chr3R 4922297 4922363 chr3R 4922426 4922492 17 127 7.0 8.0 7.5 2.0 195 chr3R 4922297 intron Cdep + chr3R 4922394 intron Cdep + chr3R 4922492 intron Cdep + chr3R_17_4920001 chr3R_4920001 RAL-307_125b 2578 chr3R 4948329 4948387 chr3R 4949001 4949024 26 670 47.5 56.0 51.8 0.5 695 chr3R 4948329 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948676 intergenic UbcD6 - chr3R 4949024 3` UTR UbcD6 - chr3R_26_4945001 chr3R_4945001 RAL-307_125b 2579 chr3R 4965963 4966034 chr3R 4966105 4966176 36 141 6.0 11.0 8.5 3.8 213 chr3R 4965963 intron CG1124 + chr3R 4966070 intron CG1124 + chr3R 4966176 intron CG1124 + chr3R_36_4965001 chr3R_4965001 RAL-307_125b 2580 chr3R 4981387 4981445 chr3R 4981489 4981531 14 106 7.5 7.5 7.5 1.6 144 chr3R 4981387 intergenic not near genes chr3R 4981459 intergenic not near genes chr3R 4981531 intergenic CG14662 - chr3R_14_4980001 chr3R_4980001 RAL-307_125b 2581 chr3R 5039012 5039063 chr3R 5039160 5039168 4 132 7.0 6.0 6.5 0.5 156 chr3R 5039012 intergenic not near genes chr3R 5039090 intergenic not near genes chr3R 5039168 intergenic not near genes chr3R_4_5035001 chr3R_5035001 RAL-307_125b 2582 chr3R 5045800 5045817 chr3R 5052952 5052969 HMS-Beagle 6 7152 19.0 8.0 13.5 0.4 7169 chr3R 5045800 3` UTR CR43635 - chr3R 5049384 intergenic not near genes chr3R 5052969 intergenic CR45588 - chr3R_6_5045001 chr3R_5045001 RAL-307_125b 2583 chr3R 5045822 5045839 chr3R 5052974 5052991 HMS-Beagle 5 7152 15.5 12.0 13.8 0.3 7169 chr3R 5045822 3` UTR CR43635 - chr3R 5049406 intergenic not near genes chr3R 5052991 intergenic CR45588 - chr3R_5_5045001 chr3R_5045001 RAL-307_125b 2584 chr3R 5045843 5045871 chr3R 5052963 5053023 HMS-Beagle 16 7150 10.0 10.0 10.0 1.5 7180 chr3R 5045843 intron CR43635 - chr3R 5049433 intergenic not near genes chr3R 5053023 intergenic CR45588 - chr3R_16_5045001 chr3R_5045001 RAL-307_125b 2585 chr3R 5067936 5067996 chr3R 5073503 5073563 mdg3 37 5565 15.5 18.5 17.0 2.1 5627 chr3R 5067936 intergenic not near genes chr3R 5070750 intergenic not near genes chr3R 5073563 intergenic not near genes chr3R_37_5070001 chr3R_5070001 RAL-307_125b 2586 chr3R 5077250 5077308 chr3R 5077436 5077481 15 184 6.0 5.5 5.8 2.2 231 chr3R 5077250 intergenic not near genes chr3R 5077366 intergenic corto - chr3R 5077481 intergenic corto - chr3R_15_5075001 chr3R_5075001 RAL-307_125b 2587 chr3R 5081068 5081132 chr3R 5081213 5081278 13 149 6.5 7.5 7.0 1.6 210 chr3R 5081068 3` UTR corto - chr3R 5081173 3` UTR corto - chr3R 5081278 3` UTR corto - chr3R_13_5080001 chr3R_5080001 RAL-307_125b 2588 chr3R 5105537 5105579 chr3R 5105632 5105692 9 103 6.5 8.5 7.5 1.1 155 chr3R 5105537 intergenic not near genes chr3R 5105614 intergenic not near genes chr3R 5105692 intergenic not near genes chr3R_9_5105001 chr3R_5105001 RAL-307_125b 2589 chr3R 5158099 5158168 chr3R 5158242 5158306 35 140 8.0 10.0 9.0 3.5 207 chr3R 5158099 intron dpr16 + chr3R 5158202 intron dpr16 + chr3R 5158306 intron dpr16 + chr3R_35_5155001 chr3R_5155001 RAL-307_125b 2590 chr3R 5191366 5191396 chr3R 5191592 5191622 16 228 41.0 65.0 53.0 0.3 256 chr3R 5191366 intron cno - chr3R 5191494 intron cno - chr3R 5191622 intron cno - chr3R_16_5190001 chr3R_5190001 RAL-307_125b 2591 chr3R 5191365 5191445 chr3R 5191631 5191671 21 230 60.0 55.5 57.8 0.4 306 chr3R 5191365 intron cno - chr3R 5191518 intron cno - chr3R 5191671 intron cno - chr3R_21_5190001 chr3R_5190001 RAL-307_125b 2592 chr3R 5205096 5205136 chr3R 5205238 5205278 20 141 16.0 8.0 12.0 1.5 182 chr3R 5205096 intron cno - chr3R 5205187 intron cno - chr3R 5205278 intron cno - chr3R_20_5205001 chr3R_5205001 RAL-307_125b 2593 chr3R 5338236 5338265 chr3R 5343614 5343643 Rt1c 19 5377 26.0 5.0 15.5 1.2 5407 chr3R 5338236 intron mtd - chr3R 5340940 intron mtd - chr3R 5343643 intron mtd - chr3R_19_5340001 chr3R_5340001 RAL-307_125b 2594 chr3R 5338267 5338306 chr3R 5343612 5343665 Rt1c 23 5370 15.0 5.0 10.0 2.1 5398 chr3R 5338267 intron mtd - chr3R 5340966 intron mtd - chr3R 5343665 intron mtd - chr3R_23_5340001 chr3R_5340001 RAL-307_125b 2595 chr3R 5397265 5397334 chr3R 5397394 5397463 26 129 4.5 11.0 7.8 3.0 198 chr3R 5397265 3` UTR CG1172 + chr3R 5397364 3` UTR CG1172 + chr3R 5397463 3` UTR CG1172 + chr3R_26_5395001 chr3R_5395001 RAL-307_125b 2596 chr3R 5445927 5445937 chr3R 5452437 5452447 Burdock 5 6510 34.0 12.0 23.0 0.2 6520 chr3R 5445927 intron CG14669 + chr3R 5449187 intron CG14669 + chr3R 5452447 intron CG14669 + chr3R_5_5445001 chr3R_5445001 RAL-307_125b 2597 chr3R 5445938 5445985 chr3R 5452433 5452495 Burdock 35 6507 17.5 11.5 14.5 2.3 6557 chr3R 5445938 intron CG14669 + chr3R 5449216 intron CG14669 + chr3R 5452495 intron CG14669 + chr3R_35_5445001 chr3R_5445001 RAL-307_125b 2598 chr3R 5502274 5502295 chr3R 5502618 5502633 7 353 5.5 8.0 6.8 0.9 359 chr3R 5502274 exon CG31547 - chr3R 5502454 5` UTR CG31547 - chr3R 5502633 5` UTR CG31547 - chr3R_7_5500001 chr3R_5500001 RAL-307_125b 2599 chr3R 5506796 5506870 chr3R 5506978 5507052 25 181 8.0 6.5 7.2 3.0 256 chr3R 5506796 intergenic not near genes chr3R 5506924 intergenic not near genes chr3R 5507052 intergenic not near genes chr3R_25_5505001 chr3R_5505001 RAL-307_125b 2600 chr3R 5578745 5578774 chr3R 5578872 5578901 13 127 25.0 8.5 16.8 0.7 156 chr3R 5578745 3` UTR CRMP + chr3R 5578823 3` UTR CRMP + chr3R 5578901 3` UTR CRMP + chr3R_13_5575001 chr3R_5575001 RAL-307_125b 2601 chr3R 5578775 5578816 chr3R 5578868 5578943 23 125 12.0 9.0 10.5 2.0 168 chr3R 5578775 3` UTR CRMP + chr3R 5578859 3` UTR CRMP + chr3R 5578943 3` UTR CRMP + chr3R_23_5575001 chr3R_5575001 RAL-307_125b 2602 chr3R 5712041 5712115 chr3R 5712179 5712186 35 134 6.0 10.0 8.0 3.9 145 chr3R 5712041 3` UTR plx + chr3R 5712114 3` UTR plx + chr3R 5712186 3` UTR plx + chr3R_35_5710001 chr3R_5710001 RAL-307_125b 2603 chr3R 5745975 5745999 chr3R 5746266 5746290 pogo 8 291 13.5 8.0 10.8 0.7 315 chr3R 5745975 3` UTR Madm + chr3R 5746132 3` UTR Madm + chr3R 5746290 3` UTR Madm + chr3R_8_5745001 chr3R_5745001 RAL-307_125b 2604 chr3R 5746001 5746039 chr3R 5746256 5746278 pogo 15 281 7.0 6.5 6.8 1.9 277 chr3R 5746001 3` UTR Madm + chr3R 5746140 3` UTR Madm + chr3R 5746278 3` UTR Madm + chr3R_15_5745001 chr3R_5745001 RAL-307_125b 2605 chr3R 5746972 5747036 chr3R 5753213 5753277 diver 30 6240 16.5 13.0 14.8 1.9 6305 chr3R 5746972 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753277 intergenic CG2091 - chr3R_30_5750001 chr3R_5750001 RAL-307_125b 2606 chr3R 5772326 5772404 chr3R 5772534 5772612 33 207 8.5 10.0 9.2 3.2 286 chr3R 5772326 intron CG2082 - chr3R 5772469 intron CG2082 - chr3R 5772612 intron CG2082 - chr3R_33_5770001 chr3R_5770001 RAL-307_125b 2607 chr3R 5809065 5809139 chr3R 5809355 5809430 pogo 38 290 7.5 9.0 8.2 4.1 365 chr3R 5809065 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809430 3` UTR CG11000 + chr3R_38_5805001 chr3R_5805001 RAL-307_125b 2608 chr3R 5822345 5822405 chr3R 5823562 5823622 1360 33 1216 6.0 11.0 8.5 3.5 1277 chr3R 5822345 3` UTR CG2023 - chr3R 5822984 3` UTR CG2023 - chr3R 5823622 3` UTR CG2023 - chr3R_33_5820001 chr3R_5820001 RAL-307_125b 2609 chr3R 5836159 5836178 chr3R 5836313 5836320 6 152 25.0 27.5 26.2 0.2 161 chr3R 5836159 exon,3` UTR CG1208 +,CR45192 - chr3R 5836240 intron CG1208 + chr3R 5836320 intron CG1208 + chr3R_6_5835001 chr3R_5835001 RAL-307_125b 2610 chr3R 5846830 5846896 chr3R 5846956 5847022 19 123 13.0 7.0 10.0 1.7 192 chr3R 5846830 intergenic CG1213 +,CG14676 + chr3R 5846926 intergenic CG14676 +,CG1213 + chr3R 5847022 intergenic CG14676 +,CG1213 + chr3R_19_5845001 chr3R_5845001 RAL-307_125b 2611 chr3R 5895927 5895981 chr3R 5896174 5896245 18 255 1.5 8.5 5.0 3.0 318 chr3R 5895927 intron CG34113 - chr3R 5896086 intron CG34113 - chr3R 5896245 intron CG34113 - chr3R_18_5895001 chr3R_5895001 RAL-307_125b 2612 chr3R 5927523 5927545 chr3R 5927813 5927834 pogo 5 290 7.0 10.0 8.5 0.5 311 chr3R 5927523 intron CG34113 - chr3R 5927678 intron CG34113 - chr3R 5927834 intron CG34113 - chr3R_5_5925001 chr3R_5925001 RAL-307_125b 2613 chr3R 5927558 5927583 chr3R 5927811 5927873 pogo 8 269 5.5 9.5 7.5 0.9 315 chr3R 5927558 intron CG34113 - chr3R 5927716 intron CG34113 - chr3R 5927873 intron CG34113 - chr3R_8_5925001 chr3R_5925001 RAL-307_125b 2614 chr3R 5935315 5935380 chr3R 5935441 5935489 32 124 11.0 8.0 9.5 3.0 174 chr3R 5935315 intron CG34113 - chr3R 5935402 intron CG34113 - chr3R 5935489 intron CG34113 - chr3R_32_5935001 chr3R_5935001 RAL-307_125b 2615 chr3R 5943355 5943416 chr3R 5943484 5943545 24 126 1.0 9.0 5.0 4.0 190 chr3R 5943355 intron CG34113 - chr3R 5943450 intron CG34113 - chr3R 5943545 intron CG34113 - chr3R_24_5940001 chr3R_5940001 RAL-307_125b 2616 chr3R 6006286 6006358 chr3R 6006416 6006482 35 131 11.5 12.0 11.8 2.7 196 chr3R 6006286 intron Rm62 - chr3R 6006384 intron Rm62 - chr3R 6006482 intron Rm62 - chr3R_35_6005001 chr3R_6005001 RAL-307_125b 2617 chr3R 6015931 6015986 chr3R 6024455 6024502 Tirant 12 8515 6.5 8.5 7.5 1.4 8571 chr3R 6015931 intergenic not near genes chr3R 6020216 intergenic not near genes chr3R 6024502 intergenic not near genes chr3R_12_6020001 chr3R_6020001 RAL-307_125b 2618 chr3R 6043594 6043635 chr3R 6043866 6043896 13 267 17.5 7.5 12.5 1.0 302 chr3R 6043594 intergenic not near genes chr3R 6043745 intergenic not near genes chr3R 6043896 intergenic not near genes chr3R_13_6040001 chr3R_6040001 RAL-307_125b 2619 chr3R 6043636 6043664 chr3R 6043863 6043925 8 257 9.5 6.0 7.8 0.9 289 chr3R 6043636 intergenic not near genes chr3R 6043780 intergenic not near genes chr3R 6043925 intergenic not near genes chr3R_8_6040001 chr3R_6040001 RAL-307_125b 2620 chr3R 6048399 6048470 chr3R 6048532 6048597 27 129 7.5 8.5 8.0 3.0 198 chr3R 6048399 intergenic not near genes chr3R 6048498 intergenic not near genes chr3R 6048597 intergenic not near genes chr3R_27_6045001 chr3R_6045001 RAL-307_125b 2621 chr3R 6121134 6121180 chr3R 6121369 6121448 BS 16 248 1.0 10.0 5.5 2.5 314 chr3R 6121134 intergenic not near genes chr3R 6121291 intergenic not near genes chr3R 6121448 intergenic not near genes chr3R_16_6120001 chr3R_6120001 RAL-307_125b 2622 chr3R 6158498 6158539 chr3R 6167091 6167117 Tirant 18 8614 9.0 4.5 6.8 2.3 8619 chr3R 6158498 intergenic not near genes chr3R 6162808 intergenic not near genes chr3R 6167117 intergenic CG1077 + chr3R_18_6160001 chr3R_6160001 RAL-307_125b 2623 chr3R 6175128 6175195 chr3R 6182449 6182517 HMS-Beagle2 32 7320 6.5 10.0 8.2 3.5 7389 chr3R 6175128 intergenic Osi1 + chr3R 6178822 intron CR45194 + chr3R 6182517 intergenic CR45194 + chr3R_32_6175001 chr3R_6175001 RAL-307_125b 2624 chr3R 6191125 6191150 chr3R 6191255 6191280 17 128 22.0 9.5 15.8 1.0 155 chr3R 6191125 intron NPFR + chr3R 6191202 intron NPFR + chr3R 6191280 intron NPFR + chr3R_17_6190001 chr3R_6190001 RAL-307_125b 2625 chr3R 6191151 6191193 chr3R 6191254 6191323 27 128 14.5 10.0 12.2 2.0 172 chr3R 6191151 intron NPFR + chr3R 6191237 intron NPFR + chr3R 6191323 intron NPFR + chr3R_27_6190001 chr3R_6190001 RAL-307_125b 2626 chr3R 6330738 6330804 chr3R 6330903 6330969 21 162 4.5 8.0 6.2 2.9 231 chr3R 6330738 exon Osi18 + chr3R 6330854 intron Osi18 + chr3R 6330969 intron Osi18 + chr3R_21_6330001 chr3R_6330001 RAL-307_125b 2627 chr3R 6461547 6461609 chr3R 6461677 6461725 27 129 9.5 10.0 9.8 2.5 178 chr3R 6461547 intergenic not near genes chr3R 6461636 intergenic not near genes chr3R 6461725 intergenic not near genes chr3R_27_6460001 chr3R_6460001 RAL-307_125b 2628 chr3R 6484024 6484079 chr3R 6484166 6484222 39 143 12.5 14.0 13.2 2.7 198 chr3R 6484024 intron CG15186 + chr3R 6484123 intron CG15186 + chr3R 6484222 intron CG15186 + chr3R_39_6480001 chr3R_6480001 RAL-307_125b 2629 chr3R 6484082 6484086 chr3R 6484165 6484229 4 128 10.5 13.5 12.0 0.3 147 chr3R 6484082 intron CG15186 + chr3R 6484156 intron CG15186 + chr3R 6484229 intron CG15186 + chr3R_4_6480001 chr3R_6480001 RAL-307_125b 2630 chr3R 6496608 6496687 chr3R 6496746 6496825 47 137 6.5 7.0 6.8 6.0 217 chr3R 6496608 intergenic not near genes chr3R 6496716 intergenic not near genes chr3R 6496825 intergenic not near genes chr3R_47_6495001 chr3R_6495001 RAL-307_125b 2631 chr3R 6509989 6510046 chr3R 6515114 6515177 jockey 22 5128 8.0 12.5 10.2 2.0 5188 chr3R 6509989 intergenic not near genes chr3R 6512583 intergenic not near genes chr3R 6515177 intergenic not near genes chr3R_22_6510001 chr3R_6510001 RAL-307_125b 2632 chr3R 6519068 6519145 chr3R 6519226 6519306 27 159 9.0 7.0 8.0 3.0 238 chr3R 6519068 intergenic not near genes chr3R 6519187 intergenic not near genes chr3R 6519306 intergenic not near genes chr3R_27_6515001 chr3R_6515001 RAL-307_125b 2633 chr3R 6610005 6610076 chr3R 6610200 6610277 24 194 10.5 10.0 10.2 2.1 272 chr3R 6610005 intergenic not near genes chr3R 6610141 intergenic not near genes chr3R 6610277 intergenic not near genes chr3R_24_6610001 chr3R_6610001 RAL-307_125b 2634 chr3R 6621833 6621885 chr3R 6621970 6622008 25 140 13.5 11.5 12.5 1.9 175 chr3R 6621833 intergenic not near genes chr3R 6621920 intergenic not near genes chr3R 6622008 intergenic not near genes chr3R_25_6620001 chr3R_6620001 RAL-307_125b 2635 chr3R 6624209 6624285 chr3R 6624340 6624417 32 130 9.0 9.5 9.2 3.1 208 chr3R 6624209 intergenic not near genes chr3R 6624313 intergenic not near genes chr3R 6624417 intergenic not near genes chr3R_32_6620001 chr3R_6620001 RAL-307_125b 2636 chr3R 6639860 6639934 chr3R 6639988 6640064 20 126 5.0 5.5 5.2 3.2 204 chr3R 6639860 intergenic not near genes chr3R 6639962 intergenic not near genes chr3R 6640064 intergenic not near genes chr3R_20_6635001 chr3R_6635001 RAL-307_125b 2637 chr3R 6655727 6655789 chr3R 6656044 6656070 31 319 8.5 12.0 10.2 2.8 343 chr3R 6655727 exon Taf1 + chr3R 6655898 3` UTR Taf1 + chr3R 6656070 intergenic Taf1 +,CG1307 - chr3R_31_6655001 chr3R_6655001 RAL-307_125b 2638 chr3R 6663562 6663577 chr3R 6663692 6663707 5 130 21.5 13.5 17.5 0.3 145 chr3R 6663562 intron lab - chr3R 6663634 intron lab - chr3R 6663707 intron lab - chr3R_5_6660001 chr3R_6660001 RAL-307_125b 2639 chr3R 6663579 6663632 chr3R 6663688 6663762 23 123 11.5 13.5 12.5 1.7 183 chr3R 6663579 intron lab - chr3R 6663670 intron lab - chr3R 6663762 intron lab - chr3R_23_6660001 chr3R_6660001 RAL-307_125b 2640 chr3R 6670526 6670541 chr3R 6670685 6670700 6 159 29.5 10.0 19.8 0.3 174 chr3R 6670526 intron lab - chr3R 6670613 intron lab - chr3R 6670700 intron lab - chr3R_6_6670001 chr3R_6670001 RAL-307_125b 2641 chr3R 6670542 6670582 chr3R 6670680 6670741 24 158 16.0 9.5 12.8 1.7 199 chr3R 6670542 intron lab - chr3R 6670642 intron lab - chr3R 6670741 intron lab - chr3R_24_6670001 chr3R_6670001 RAL-307_125b 2642 chr3R 6705627 6705707 chr3R 6705908 6705981 21 274 1.0 7.0 4.0 4.2 354 chr3R 6705627 intergenic not near genes chr3R 6705804 intergenic not near genes chr3R 6705981 intergenic not near genes chr3R_21_6705001 chr3R_6705001 RAL-307_125b 2643 chr3R 6737462 6737480 chr3R 6739299 6739309 Doc 4 1834 10.5 8.0 9.2 0.4 1847 chr3R 6737462 intron pb - chr3R 6738386 intron pb - chr3R 6739309 intron pb - chr3R_4_6735001 chr3R_6735001 RAL-307_125b 2644 chr3R 6737484 6737526 chr3R 6739291 6739363 Doc 17 1826 5.5 6.5 6.0 2.4 1879 chr3R 6737484 intron pb - chr3R 6738424 intron pb - chr3R 6739363 intron pb - chr3R_17_6735001 chr3R_6735001 RAL-307_125b 2645 chr3R 6740957 6740970 chr3R 6741090 6741103 5 133 27.0 7.5 17.2 0.3 146 chr3R 6740957 intron pb - chr3R 6741030 intron pb - chr3R 6741103 intron pb - chr3R_5_6740001 chr3R_6740001 RAL-307_125b 2646 chr3R 6740971 6741033 chr3R 6741087 6741166 46 131 8.5 7.5 8.0 5.1 195 chr3R 6740971 intron pb - chr3R 6741068 intron pb - chr3R 6741166 intron pb - chr3R_46_6740001 chr3R_6740001 RAL-307_125b 2647 chr3R 6819590 6819654 chr3R 6819724 6819788 37 133 10.5 12.5 11.5 3.0 198 chr3R 6819590 intergenic not near genes chr3R 6819689 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819788 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_37_6815001 chr3R_6815001 RAL-307_125b 2648 chr3R 6827976 6828037 chr3R 6828102 6828163 20 125 8.0 10.0 9.0 2.0 187 chr3R 6827976 intron Scr - chr3R 6828070 intron Scr - chr3R 6828163 intron Scr - chr3R_20_6825001 chr3R_6825001 RAL-307_125b 2649 chr3R 6856336 6856399 chr3R 6856503 6856566 30 167 10.5 6.0 8.2 3.3 230 chr3R 6856336 intergenic not near genes chr3R 6856451 intergenic not near genes chr3R 6856566 intergenic not near genes chr3R_30_6855001 chr3R_6855001 RAL-307_125b 2650 chr3R 6862176 6862187 chr3R 6862313 6862324 4 137 19.0 12.5 15.8 0.2 148 chr3R 6862176 intergenic not near genes chr3R 6862250 intergenic not near genes chr3R 6862324 intergenic not near genes chr3R_4_6860001 chr3R_6860001 RAL-307_125b 2651 chr3R 6862188 6862241 chr3R 6862310 6862378 26 133 8.0 11.5 9.8 2.4 190 chr3R 6862188 intergenic not near genes chr3R 6862283 intergenic not near genes chr3R 6862378 intergenic not near genes chr3R_26_6860001 chr3R_6860001 RAL-307_125b 2652 chr3R 6918022 6918090 chr3R 6918150 6918208 30 126 11.0 6.5 8.8 3.1 186 chr3R 6918022 intron Antp - chr3R 6918115 intron Antp - chr3R 6918208 intron Antp - chr3R_30_6915001 chr3R_6915001 RAL-307_125b 2653 chr3R 6990423 6990489 chr3R 6990563 6990629 20 140 6.5 6.5 6.5 2.7 206 chr3R 6990423 intron Antp - chr3R 6990526 intron Antp - chr3R 6990629 intron Antp - chr3R_20_6990001 chr3R_6990001 RAL-307_125b 2654 chr3R 6991151 6991200 chr3R 6991261 6991326 9 114 4.5 4.5 4.5 1.6 175 chr3R 6991151 intron Antp - chr3R 6991238 intron Antp - chr3R 6991326 intron Antp - chr3R_9_6990001 chr3R_6990001 RAL-307_125b 2655 chr3R 7012177 7012207 chr3R 7012294 7012310 10 120 8.0 10.0 9.0 1.0 133 chr3R 7012177 intergenic not near genes chr3R 7012244 intergenic not near genes chr3R 7012310 intergenic not near genes chr3R_10_7010001 chr3R_7010001 RAL-307_125b 2656 chr3R 7051080 7051140 chr3R 7051209 7051269 30 128 10.0 9.0 9.5 2.9 189 chr3R 7051080 intergenic not near genes chr3R 7051174 intergenic not near genes chr3R 7051269 intergenic not near genes chr3R_30_7050001 chr3R_7050001 RAL-307_125b 2657 chr3R 7103236 7103304 chr3R 7103362 7103424 19 118 4.5 8.5 6.5 2.5 188 chr3R 7103236 intron Alh - chr3R 7103330 intron Alh - chr3R 7103424 intron Alh - chr3R_19_7100001 chr3R_7100001 RAL-307_125b 2658 chr3R 7121691 7121734 chr3R 7121824 7121867 4 130 7.5 10.5 9.0 0.4 176 chr3R 7121691 exon Alh - chr3R 7121779 intron Alh - chr3R 7121867 intron Alh - chr3R_4_7120001 chr3R_7120001 RAL-307_125b 2659 chr3R 7126470 7126474 chr3R 7126615 7126619 6 145 22.5 14.5 18.5 0.3 149 chr3R 7126470 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126544 3` UTR CG10068 - chr3R 7126619 3` UTR CG10068 - chr3R_6_7125001 chr3R_7125001 RAL-307_125b 2660 chr3R 7126479 7126529 chr3R 7126604 7126674 37 142 7.5 10.0 8.8 3.8 195 chr3R 7126479 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126576 3` UTR CG10068 - chr3R 7126674 3` UTR CG10068 - chr3R_37_7125001 chr3R_7125001 RAL-307_125b 2661 chr3R 7173635 7173699 chr3R 7173765 7173776 24 127 15.5 12.0 13.8 1.6 141 chr3R 7173635 intron sas + chr3R 7173706 intron sas + chr3R 7173776 intron sas + chr3R_24_7170001 chr3R_7170001 RAL-307_125b 2662 chr3R 7217414 7217476 chr3R 7217685 7217741 29 271 14.5 11.0 12.8 2.1 327 chr3R 7217414 intergenic CG14605 -,CG14606 - chr3R 7217578 intergenic CG14605 -,CG14606 - chr3R 7217741 exon CG14605 - chr3R_29_7215001 chr3R_7215001 RAL-307_125b 2663 chr3R 7312215 7312292 chr3R 7312342 7312374 5 118 3.5 9.0 6.2 0.7 159 chr3R 7312215 intergenic CR44334 - chr3R 7312294 intergenic CR44334 - chr3R 7312374 3` UTR CR44334 - chr3R_5_7310001 chr3R_7310001 RAL-307_125b 2664 chr3R 7332107 7332129 chr3R 7332234 7332256 7 126 15.5 10.5 13.0 0.5 149 chr3R 7332107 intergenic CR44337 + chr3R 7332182 intergenic CR44337 + chr3R 7332256 intergenic CR44337 + chr3R_7_7330001 chr3R_7330001 RAL-307_125b 2665 chr3R 7332130 7332169 chr3R 7332230 7332296 15 115 9.0 11.0 10.0 1.4 166 chr3R 7332130 intergenic CR44337 + chr3R 7332213 intergenic CR44337 + chr3R 7332296 intergenic CR44337 + chr3R_15_7330001 chr3R_7330001 RAL-307_125b 2666 chr3R 7402166 7402199 chr3R 7402277 7402348 10 130 6.5 3.5 5.0 1.7 182 chr3R 7402166 intergenic not near genes chr3R 7402257 intergenic not near genes chr3R 7402348 intergenic not near genes chr3R_10_7400001 chr3R_7400001 RAL-307_125b 2667 chr3R 7447946 7448011 chr3R 7448074 7448139 37 126 20.0 12.0 16.0 2.2 193 chr3R 7447946 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448139 intergenic not near genes chr3R_37_7445001 chr3R_7445001 RAL-307_125b 2668 chr3R 7574584 7574653 chr3R 7574704 7574779 17 122 4.5 5.5 5.0 2.8 195 chr3R 7574584 intron CG34127 - chr3R 7574682 intron CG34127 - chr3R 7574779 intron CG34127 - chr3R_17_7570001 chr3R_7570001 RAL-307_125b 2669 chr3R 7621482 7621558 chr3R 7621622 7621672 16 135 5.5 8.0 6.8 2.1 190 chr3R 7621482 intron CG34127 - chr3R 7621577 intron CG34127 - chr3R 7621672 intron CG34127 - chr3R_16_7620001 chr3R_7620001 RAL-307_125b 2670 chr3R 7641018 7641026 chr3R 7642632 7642640 hobo 4 1614 23.0 14.5 18.8 0.2 1622 chr3R 7641018 intergenic not near genes chr3R 7641829 intergenic not near genes chr3R 7642640 intergenic not near genes chr3R_4_7640001 chr3R_7640001 RAL-307_125b 2671 chr3R 7641028 7641055 chr3R 7642630 7642658 hobo 14 1609 16.5 14.0 15.2 0.9 1630 chr3R 7641028 intergenic not near genes chr3R 7641843 intergenic not near genes chr3R 7642658 intergenic not near genes chr3R_14_7640001 chr3R_7640001 RAL-307_125b 2672 chr3R 7641056 7641090 chr3R 7642623 7642645 hobo 27 1604 8.0 10.5 9.2 2.6 1589 chr3R 7641056 intergenic not near genes chr3R 7641850 intergenic not near genes chr3R 7642645 intergenic not near genes chr3R_27_7640001 chr3R_7640001 RAL-307_125b 2673 chr3R 7688706 7688784 chr3R 7689111 7689159 28 401 9.0 7.5 8.2 3.0 453 chr3R 7688706 intron Nlg1 + chr3R 7688932 intron Nlg1 + chr3R 7689159 intron Nlg1 + chr3R_28_7685001 chr3R_7685001 RAL-307_125b 2674 chr3R 7729421 7729488 chr3R 7737409 7737476 Stalker2 47 7986 10.0 10.0 10.0 4.3 8055 chr3R 7729421 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737476 intergenic not near genes chr3R_47_7730001 chr3R_7730001 RAL-307_125b 2675 chr3R 7740836 7740903 chr3R 7740970 7741017 26 133 8.5 14.0 11.2 2.1 181 chr3R 7740836 intergenic CR44935 + chr3R 7740926 intergenic CR44935 + chr3R 7741017 intergenic CR44935 + chr3R_26_7740001 chr3R_7740001 RAL-307_125b 2676 chr3R 7760206 7760274 chr3R 7760765 7760833 25 557 14.0 13.0 13.5 1.7 627 chr3R 7760206 intron Sp7 + chr3R 7760520 intron Sp7 + chr3R 7760833 5` UTR Sp7 + chr3R_25_7760001 chr3R_7760001 RAL-307_125b 2677 chr3R 7775866 7775951 chr3R 7775997 7776048 27 128 6.0 7.0 6.5 3.6 182 chr3R 7775866 intergenic not near genes chr3R 7775957 intergenic not near genes chr3R 7776048 intergenic not near genes chr3R_27_7775001 chr3R_7775001 RAL-307_125b 2678 chr3R 7948399 7948408 chr3R 7948524 7948535 7 125 21.5 7.5 14.5 0.5 136 chr3R 7948399 intron dsx - chr3R 7948467 intron dsx - chr3R 7948535 intron dsx - chr3R_7_7945001 chr3R_7945001 RAL-307_125b 2679 chr3R 7948413 7948469 chr3R 7948523 7948596 23 126 6.5 7.5 7.0 2.9 183 chr3R 7948413 intron dsx - chr3R 7948504 intron dsx - chr3R 7948596 intron dsx - chr3R_23_7945001 chr3R_7945001 RAL-307_125b 2680 chr3R 7955892 7955964 chr3R 7956019 7956075 17 125 7.5 7.0 7.2 2.1 183 chr3R 7955892 intron dsx - chr3R 7955984 intron dsx - chr3R 7956075 intron dsx - chr3R_17_7955001 chr3R_7955001 RAL-307_125b 2681 chr3R 7973277 7973334 chr3R 7974389 7974438 1360 28 1110 15.0 12.5 13.8 1.9 1161 chr3R 7973277 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974438 3` UTR CD98hc - chr3R_28_7970001 chr3R_7970001 RAL-307_125b 2682 chr3R 8038288 8038308 chr3R 8038420 8038440 15 132 10.5 17.0 13.8 1.0 152 chr3R 8038288 5` UTR CR44936 + chr3R 8038364 5` UTR CR44936 + chr3R 8038440 5` UTR CR44936 + chr3R_15_8035001 chr3R_8035001 RAL-307_125b 2683 chr3R 8075983 8076060 chr3R 8076214 8076291 38 226 9.0 7.5 8.2 4.1 308 chr3R 8075983 intron mAChR-B + chr3R 8076137 intron mAChR-B + chr3R 8076291 intron mAChR-B + chr3R_38_8075001 chr3R_8075001 RAL-307_125b 2684 chr3R 8090221 8090302 chr3R 8090448 8090494 46 223 6.5 11.5 9.0 4.6 273 chr3R 8090221 5` UTR CR44330 + chr3R 8090358 intergenic CR44330 + chr3R 8090494 intergenic CR44330 + chr3R_46_8090001 chr3R_8090001 RAL-307_125b 2685 chr3R 8090517 8090561 chr3R 8094044 8094074 297 24 3524 13.0 12.5 12.8 1.7 3557 chr3R 8090517 intergenic CR44330 + chr3R 8092296 intergenic not near genes chr3R 8094074 intergenic CG7900 + chr3R_24_8090001 chr3R_8090001 RAL-307_125b 2686 chr3R 8094367 8094397 chr3R 8099722 8099752 Transpac 15 5354 12.5 12.0 12.2 1.1 5385 chr3R 8094367 intron CG7900 + chr3R 8097060 intron CG7900 + chr3R 8099752 intron CG7900 + chr3R_15_8095001 chr3R_8095001 RAL-307_125b 2687 chr3R 8094400 8094422 chr3R 8099712 8099777 Transpac 13 5350 8.5 9.5 9.0 1.3 5377 chr3R 8094400 intron CG7900 + chr3R 8097088 intron CG7900 + chr3R 8099777 intron CG7900 + chr3R_13_8095001 chr3R_8095001 RAL-307_125b 2688 chr3R 8101731 8101750 chr3R 8104850 8104884 G2 7 3131 11.5 12.0 11.8 0.5 3153 chr3R 8101731 exon CG7900 + chr3R 8103308 intron CG7900 + chr3R 8104884 3` UTR CG7900 + chr3R_7_8100001 chr3R_8100001 RAL-307_125b 2689 chr3R 8101751 8101770 chr3R 8104849 8104904 G2 13 3125 11.0 11.5 11.2 1.1 3153 chr3R 8101751 exon CG7900 + chr3R 8103328 intron CG7900 + chr3R 8104904 3` UTR CG7900 + chr3R_13_8100001 chr3R_8100001 RAL-307_125b 2690 chr3R 8107344 8107416 chr3R 8107528 8107594 39 183 10.0 14.0 12.0 3.0 250 chr3R 8107344 intron puc + chr3R 8107469 intron puc + chr3R 8107594 intron puc + chr3R_39_8105001 chr3R_8105001 RAL-307_125b 2691 chr3R 8163819 8163889 chr3R 8163948 8164018 37 123 15.5 8.5 12.0 2.8 199 chr3R 8163819 intron grn - chr3R 8163918 intron grn - chr3R 8164018 intron grn - chr3R_37_8160001 chr3R_8160001 RAL-307_125b 2692 chr3R 8182610 8182672 chr3R 8182754 8182805 25 140 12.0 12.0 12.0 1.9 195 chr3R 8182610 intergenic not near genes chr3R 8182708 intergenic not near genes chr3R 8182805 intergenic not near genes chr3R_25_8180001 chr3R_8180001 RAL-307_125b 2693 chr3R 8207527 8207568 chr3R 8208406 8208453 F-element 23 885 13.0 12.5 12.8 1.7 926 chr3R 8207527 intergenic not near genes chr3R 8207990 intergenic not near genes chr3R 8208453 intergenic not near genes chr3R_23_8205001 chr3R_8205001 RAL-307_125b 2694 chr3R 8207570 8207585 chr3R 8208403 8208447 F-element 8 874 7.5 11.5 9.5 0.8 877 chr3R 8207570 intergenic not near genes chr3R 8208008 intergenic not near genes chr3R 8208447 intergenic not near genes chr3R_8_8205001 chr3R_8205001 RAL-307_125b 2695 chr3R 8230866 8230905 chr3R 8231356 8231404 7 506 4.5 5.0 4.8 1.2 538 chr3R 8230866 3` UTR CR45551 - chr3R 8231135 3` UTR CR45551 - chr3R 8231404 3` UTR CR45551 - chr3R_7_8230001 chr3R_8230001 RAL-307_125b 2696 chr3R 8284060 8284094 chr3R 8284194 8284226 10 130 15.5 5.5 10.5 0.9 166 chr3R 8284060 intergenic not near genes chr3R 8284143 intergenic not near genes chr3R 8284226 intergenic not near genes chr3R_10_8280001 chr3R_8280001 RAL-307_125b 2697 chr3R 8402972 8403026 chr3R 8412182 8412236 roo 14 9212 8.5 9.0 8.8 1.4 9264 chr3R 8402972 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412236 intron CG45263 - chr3R_14_8405001 chr3R_8405001 RAL-307_125b 2698 chr3R 8431128 8431176 chr3R 8431240 8431296 21 132 8.0 5.5 6.8 2.7 168 chr3R 8431128 intron CG45263 - chr3R 8431212 intron CG45263 - chr3R 8431296 intron CG45263 - chr3R_21_8430001 chr3R_8430001 RAL-307_125b 2699 chr3R 8468150 8468192 chr3R 8468276 8468333 17 132 6.0 8.0 7.0 2.1 183 chr3R 8468150 intron CG45263 - chr3R 8468242 intron CG45263 - chr3R 8468333 intron CG45263 - chr3R_17_8465001 chr3R_8465001 RAL-307_125b 2700 chr3R 8478033 8478052 chr3R 8478163 8478182 4 130 22.5 8.5 15.5 0.2 149 chr3R 8478033 intergenic CG45263 - chr3R 8478108 intergenic CG45263 - chr3R 8478182 intergenic not near genes chr3R_4_8475001 chr3R_8475001 RAL-307_125b 2701 chr3R 8478064 8478109 chr3R 8478161 8478209 24 123 10.5 8.5 9.5 2.3 145 chr3R 8478064 intergenic CG45263 - chr3R 8478136 intergenic not near genes chr3R 8478209 intergenic not near genes chr3R_24_8475001 chr3R_8475001 RAL-307_125b 2702 chr3R 8541293 8541308 chr3R 8541424 8541439 6 131 17.0 6.0 11.5 0.5 146 chr3R 8541293 intergenic not near genes chr3R 8541366 intergenic not near genes chr3R 8541439 intergenic not near genes chr3R_6_8540001 chr3R_8540001 RAL-307_125b 2703 chr3R 8541309 8541366 chr3R 8541419 8541497 19 116 9.0 6.0 7.5 2.2 188 chr3R 8541309 intergenic not near genes chr3R 8541403 intergenic not near genes chr3R 8541497 intergenic not near genes chr3R_19_8540001 chr3R_8540001 RAL-307_125b 2704 chr3R 8570447 8570506 chr3R 8575133 8575191 HMS-Beagle 19 4679 6.5 14.0 10.2 1.7 4744 chr3R 8570447 intergenic not near genes chr3R 8572819 intergenic not near genes chr3R 8575191 intergenic not near genes chr3R_19_8570001 chr3R_8570001 RAL-307_125b 2705 chr3R 8582929 8582949 chr3R 8583066 8583077 7 135 24.0 11.5 17.8 0.4 148 chr3R 8582929 intron 5-HT2B + chr3R 8583003 intron 5-HT2B + chr3R 8583077 intron 5-HT2B + chr3R_7_8580001 chr3R_8580001 RAL-307_125b 2706 chr3R 8582952 8582968 chr3R 8583065 8583105 5 125 17.0 11.0 14.0 0.3 153 chr3R 8582952 intron 5-HT2B + chr3R 8583028 intron 5-HT2B + chr3R 8583105 intron 5-HT2B + chr3R_5_8580001 chr3R_8580001 RAL-307_125b 2707 chr3R 8601732 8601793 chr3R 8610935 8610966 roo 24 9194 6.5 9.5 8.0 2.7 9234 chr3R 8601732 intron 5-HT2B + chr3R 8606349 intron 5-HT2B + chr3R 8610966 intron 5-HT2B + chr3R_24_8605001 chr3R_8605001 RAL-307_125b 2708 chr3R 8614791 8614797 chr3R 8615022 8615050 5 249 3.5 13.5 8.5 0.5 259 chr3R 8614791 intron 5-HT2B + chr3R 8614920 intron 5-HT2B + chr3R 8615050 intron 5-HT2B + chr3R_5_8610001 chr3R_8610001 RAL-307_125b 2709 chr3R 8614799 8614809 chr3R 8615019 8615062 11 243 0.5 13.0 6.8 1.4 263 chr3R 8614799 intron 5-HT2B + chr3R 8614930 intron 5-HT2B + chr3R 8615062 intron 5-HT2B + chr3R_11_8610001 chr3R_8610001 RAL-307_125b 2710 chr3R 8621496 8621502 chr3R 8621623 8621629 4 126 29.0 8.5 18.8 0.2 133 chr3R 8621496 intron 5-HT2B + chr3R 8621562 intron 5-HT2B + chr3R 8621629 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-307_125b 2711 chr3R 8642370 8642437 chr3R 8642497 8642540 14 119 12.5 7.0 9.8 1.3 170 chr3R 8642370 intergenic not near genes chr3R 8642455 intergenic not near genes chr3R 8642540 intergenic not near genes chr3R_14_8640001 chr3R_8640001 RAL-307_125b 2712 chr3R 8707313 8707338 chr3R 8709804 8709823 jockey 8 2488 13.0 6.0 9.5 0.8 2510 chr3R 8707313 intergenic not near genes chr3R 8708568 intergenic not near genes chr3R 8709823 intergenic not near genes chr3R_8_8705001 chr3R_8705001 RAL-307_125b 2713 chr3R 8707346 8707372 chr3R 8709801 8709846 jockey 9 2479 7.5 5.0 6.2 1.2 2500 chr3R 8707346 intergenic not near genes chr3R 8708596 intergenic not near genes chr3R 8709846 intergenic not near genes chr3R_9_8705001 chr3R_8705001 RAL-307_125b 2714 chr3R 8745702 8745775 chr3R 8745863 8745936 40 160 11.5 12.5 12.0 3.1 234 chr3R 8745702 intron CG9801 - chr3R 8745819 intron CG9801 - chr3R 8745936 intron CG9801 - chr3R_40_8745001 chr3R_8745001 RAL-307_125b 2715 chr3R 8843472 8843525 chr3R 8843728 8843787 18 261 12.5 10.5 11.5 1.4 315 chr3R 8843472 intron pyd - chr3R 8843630 intron pyd - chr3R 8843787 intron pyd - chr3R_18_8840001 chr3R_8840001 RAL-307_125b 2716 chr3R 8883272 8883335 chr3R 8883403 8883465 17 127 9.5 12.0 10.8 1.4 193 chr3R 8883272 intron pyd - chr3R 8883368 intron pyd - chr3R 8883465 intron pyd - chr3R_17_8880001 chr3R_8880001 RAL-307_125b 2717 chr3R 8894830 8894896 chr3R 8896036 8896102 1360 41 1202 12.5 15.5 14.0 2.7 1272 chr3R 8894830 intron pyd - chr3R 8895466 intron pyd - chr3R 8896102 intron pyd - chr3R_41_8895001 chr3R_8895001 RAL-307_125b 2718 chr3R 8898173 8898211 chr3R 8913803 8913841 297 9 15628 12.0 1.5 6.8 1.2 15668 chr3R 8898173 intron pyd - chr3R 8906007 intron pyd - chr3R 8913841 intron pyd - chr3R_9_8905001 chr3R_8905001 RAL-307_125b 2719 chr3R 9036666 9036741 chr3R 9036812 9036886 38 145 11.5 7.0 9.2 3.7 220 chr3R 9036666 intron neur - chr3R 9036776 intron neur - chr3R 9036886 intron neur - chr3R_38_9035001 chr3R_9035001 RAL-307_125b 2720 chr3R 9108818 9108879 chr3R 9108944 9109005 41 125 13.0 11.0 12.0 3.2 187 chr3R 9108818 intron pum - chr3R 9108912 intron pum - chr3R 9109005 intron pum - chr3R_41_9105001 chr3R_9105001 RAL-307_125b 2721 chr3R 9118821 9118894 chr3R 9119227 9119301 13 398 7.5 13.5 10.5 1.1 480 chr3R 9118821 intron pum - chr3R 9119061 intron pum - chr3R 9119301 intron pum - chr3R_13_9115001 chr3R_9115001 RAL-307_125b 2722 chr3R 9166485 9166521 chr3R 9166871 9166909 10 387 15.0 5.5 10.2 0.9 424 chr3R 9166485 intron pum - chr3R 9166697 intron pum - chr3R 9166909 intron pum - chr3R_10_9165001 chr3R_9165001 RAL-307_125b 2723 chr3R 9166522 9166551 chr3R 9166870 9166939 13 381 9.5 5.5 7.5 1.5 417 chr3R 9166522 intron pum - chr3R 9166730 intron pum - chr3R 9166939 intron pum - chr3R_13_9165001 chr3R_9165001 RAL-307_125b 2724 chr3R 9170282 9170347 chr3R 9170787 9170852 14 498 6.5 5.5 6.0 2.0 570 chr3R 9170282 intron pum - chr3R 9170567 intron pum - chr3R 9170852 intron pum - chr3R_14_9170001 chr3R_9170001 RAL-307_125b 2725 chr3R 9170349 9170357 chr3R 9170779 9170805 5 467 5.0 5.5 5.2 0.8 456 chr3R 9170349 intron pum - chr3R 9170577 intron pum - chr3R 9170805 intron pum - chr3R_5_9170001 chr3R_9170001 RAL-307_125b 2726 chr3R 9181774 9181841 chr3R 9181907 9181973 32 131 11.5 10.0 10.8 2.7 199 chr3R 9181774 intron pum - chr3R 9181874 intron pum - chr3R 9181973 intron pum - chr3R_32_9180001 chr3R_9180001 RAL-307_125b 2727 chr3R 9278753 9278800 chr3R 9284054 9284109 Rt1a 24 5305 16.0 13.5 14.8 1.5 5356 chr3R 9278753 intergenic not near genes chr3R 9281431 intergenic not near genes chr3R 9284109 intergenic not near genes chr3R_24_9280001 chr3R_9280001 RAL-307_125b 2728 chr3R 9289112 9289182 chr3R 9289427 9289497 21 310 4.5 10.5 7.5 2.5 385 chr3R 9289112 intergenic not near genes chr3R 9289304 intergenic not near genes chr3R 9289497 intergenic not near genes chr3R_21_9285001 chr3R_9285001 RAL-307_125b 2729 chr3R 9319535 9319600 chr3R 9320020 9320087 jockey 34 481 12.0 11.5 11.8 2.7 552 chr3R 9319535 intron CG8861 - chr3R 9319811 intron CG8861 - chr3R 9320087 intron CG8861 - chr3R_34_9315001 chr3R_9315001 RAL-307_125b 2730 chr3R 9361804 9361833 chr3R 9362095 9362124 pogo 15 291 7.5 19.0 13.2 1.1 320 chr3R 9361804 3` UTR CG45050 + chr3R 9361964 3` UTR CG45050 + chr3R 9362124 3` UTR CG45050 + chr3R_15_9360001 chr3R_9360001 RAL-307_125b 2731 chr3R 9382771 9382842 chr3R 9382946 9383017 43 171 7.5 8.5 8.0 4.8 246 chr3R 9382771 intron FER - chr3R 9382894 intron FER - chr3R 9383017 intron FER - chr3R_43_9380001 chr3R_9380001 RAL-307_125b 2732 chr3R 9447440 9447458 chr3R 9447557 9447607 9 145 12.5 15.0 13.8 0.6 167 chr3R 9447440 intron ps + chr3R 9447524 intron ps + chr3R 9447607 intron ps + chr3R_9_9445001 chr3R_9445001 RAL-307_125b 2733 chr3R 9586655 9586721 chr3R 9586797 9586863 19 141 12.0 4.0 8.0 2.1 208 chr3R 9586655 intergenic CG8301 +,P58IPK + chr3R 9586759 intergenic CG8301 +,P58IPK + chr3R 9586863 intergenic P58IPK +,CG8301 + chr3R_19_9585001 chr3R_9585001 RAL-307_125b 2734 chr3R 9601416 9601465 chr3R 9601584 9601633 19 164 13.0 8.0 10.5 1.7 217 chr3R 9601416 intron CG8312 + chr3R 9601524 intron CG8312 + chr3R 9601633 intron CG8312 + chr3R_19_9600001 chr3R_9600001 RAL-307_125b 2735 chr3R 9601466 9601490 chr3R 9601579 9601658 16 160 8.5 6.0 7.2 2.0 192 chr3R 9601466 intron CG8312 + chr3R 9601562 intron CG8312 + chr3R 9601658 intron CG8312 + chr3R_16_9600001 chr3R_9600001 RAL-307_125b 2736 chr3R 9610799 9610865 chr3R 9610991 9611057 23 184 9.0 8.0 8.5 2.4 258 chr3R 9610799 intron CG8312 + chr3R 9610928 intron CG8312 + chr3R 9611057 intron CG8312 + chr3R_23_9610001 chr3R_9610001 RAL-307_125b 2737 chr3R 9702221 9702276 chr3R 9702347 9702392 12 114 11.5 8.0 9.8 1.1 171 chr3R 9702221 intron Unc-115a - chr3R 9702306 intron Unc-115a - chr3R 9702392 intron Unc-115a - chr3R_12_9700001 chr3R_9700001 RAL-307_125b 2738 chr3R 9858634 9858696 chr3R 9858783 9858845 30 148 13.5 9.0 11.2 2.5 211 chr3R 9858634 intron Teh1 - chr3R 9858740 intron Teh1 - chr3R 9858845 intron Teh1 - chr3R_30_9855001 chr3R_9855001 RAL-307_125b 2739 chr3R 9859946 9860000 chr3R 9860110 9860164 21 162 6.0 5.0 5.5 3.2 218 chr3R 9859946 intron Teh1 - chr3R 9860055 intron Teh1 - chr3R 9860164 intron Teh1 - chr3R_21_9860001 chr3R_9860001 RAL-307_125b 2740 chr3R 9877979 9878025 chr3R 9878111 9878163 15 135 11.0 7.5 9.2 1.5 184 chr3R 9877979 intron,intron Glut4EF +,CR45029 - chr3R 9878071 intron,intron Glut4EF +,CR45029 - chr3R 9878163 intron,3` UTR Glut4EF +,CR45029 - chr3R_15_9875001 chr3R_9875001 RAL-307_125b 2741 chr3R 10196907 10196928 chr3R 10202944 10202965 297 9 6035 16.5 12.0 14.2 0.6 6058 chr3R 10196907 exon Syn + chr3R 10199936 intron Syn + chr3R 10202965 intron Syn + chr3R_9_10195001 chr3R_10195001 RAL-307_125b 2742 chr3R 10231739 10231813 chr3R 10237366 10237434 mdg3 39 5624 10.0 11.0 10.5 3.4 5695 chr3R 10231739 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237434 intron CG42795 + chr3R_39_10230001 chr3R_10230001 RAL-307_125b 2743 chr3R 10255339 10255383 chr3R 10260829 10260873 I-element 26 5488 18.0 14.0 16.0 1.5 5534 chr3R 10255339 intergenic Sirt6 -,CG3999 + chr3R 10258106 intron Sirt6 - chr3R 10260873 exon Sirt6 - chr3R_26_10255001 chr3R_10255001 RAL-307_125b 2744 chr3R 10306961 10307023 chr3R 10312172 10312236 25 5212 46.5 75.5 61.0 0.4 5275 chr3R 10306961 exon CG43143 + chr3R 10309598 exon CG6293 - chr3R 10312236 3` UTR Bruce - chr3R_25_10305001 chr3R_10305001 RAL-307_125b 2745 chr3R 10394028 10394036 chr3R 10394177 10394185 6 149 30.0 13.0 21.5 0.3 157 chr3R 10394028 intron cwo + chr3R 10394106 intron cwo + chr3R 10394185 intron cwo + chr3R_6_10390001 chr3R_10390001 RAL-307_125b 2746 chr3R 10394037 10394093 chr3R 10394175 10394242 30 143 13.0 13.0 13.0 2.1 205 chr3R 10394037 intron cwo + chr3R 10394140 intron cwo + chr3R 10394242 intron cwo + chr3R_30_10390001 chr3R_10390001 RAL-307_125b 2747 chr3R 10427373 10427438 chr3R 10427533 10427598 8 160 7.5 6.0 6.8 1.0 225 chr3R 10427373 intergenic not near genes chr3R 10427486 intergenic not near genes chr3R 10427598 intergenic not near genes chr3R_8_10425001 chr3R_10425001 RAL-307_125b 2748 chr3R 10430640 10430697 chr3R 10430770 10430836 29 136 18.0 15.0 16.5 1.7 196 chr3R 10430640 intergenic not near genes chr3R 10430738 intergenic not near genes chr3R 10430836 intergenic not near genes chr3R_29_10430001 chr3R_10430001 RAL-307_125b 2749 chr3R 10526282 10526317 chr3R 10526575 10526604 13 303 5.5 12.5 9.0 1.3 322 chr3R 10526282 intron hth - chr3R 10526443 intron hth - chr3R 10526604 intron hth - chr3R_13_10525001 chr3R_10525001 RAL-307_125b 2750 chr3R 10596602 10596647 chr3R 10596708 10596738 7 107 6.5 4.5 5.5 1.1 136 chr3R 10596602 intron hth - chr3R 10596670 intron hth - chr3R 10596738 intron hth - chr3R_7_10595001 chr3R_10595001 RAL-307_125b 2751 chr3R 10651769 10651789 chr3R 10651917 10651938 10 149 27.5 13.0 20.2 0.5 169 chr3R 10651769 intergenic not near genes chr3R 10651854 intergenic not near genes chr3R 10651938 intergenic not near genes chr3R_10_10650001 chr3R_10650001 RAL-307_125b 2752 chr3R 10651790 10651841 chr3R 10651908 10651935 22 141 11.0 12.5 11.8 1.7 145 chr3R 10651790 intergenic not near genes chr3R 10651862 intergenic not near genes chr3R 10651935 intergenic not near genes chr3R_22_10650001 chr3R_10650001 RAL-307_125b 2753 chr3R 10723718 10723752 chr3R 10723860 10723894 15 139 16.5 4.0 10.2 1.3 176 chr3R 10723718 intergenic not near genes chr3R 10723806 intergenic not near genes chr3R 10723894 intergenic not near genes chr3R_15_10720001 chr3R_10720001 RAL-307_125b 2754 chr3R 10727607 10727669 chr3R 10727725 10727733 21 119 12.5 8.5 10.5 1.8 126 chr3R 10727607 intergenic not near genes chr3R 10727670 intergenic not near genes chr3R 10727733 intergenic not near genes chr3R_21_10725001 chr3R_10725001 RAL-307_125b 2755 chr3R 10732276 10732346 chr3R 10733198 10733268 39 921 9.5 10.0 9.8 3.6 992 chr3R 10732276 intergenic not near genes chr3R 10732772 intergenic not near genes chr3R 10733268 intergenic not near genes chr3R_39_10730001 chr3R_10730001 RAL-307_125b 2756 chr3R 10868582 10868618 chr3R 10868671 10868709 10 95 4.5 5.5 5.0 1.7 127 chr3R 10868582 5` UTR SelR - chr3R 10868646 intergenic SelR -,Tsp86D + chr3R 10868709 5` UTR Tsp86D + chr3R_10_10865001 chr3R_10865001 RAL-307_125b 2757 chr3R 10904870 10904898 chr3R 10905123 10905152 13 254 15.5 9.5 12.5 1.0 282 chr3R 10904870 intergenic not near genes chr3R 10905011 intergenic not near genes chr3R 10905152 intergenic not near genes chr3R_13_10905001 chr3R_10905001 RAL-307_125b 2758 chr3R 10904899 10904936 chr3R 10905113 10905190 20 249 5.0 6.5 5.8 2.9 291 chr3R 10904899 intergenic not near genes chr3R 10905044 intergenic not near genes chr3R 10905190 intergenic not near genes chr3R_20_10905001 chr3R_10905001 RAL-307_125b 2759 chr3R 10906781 10906857 chr3R 10906907 10906973 27 117 6.0 10.5 8.2 2.9 192 chr3R 10906781 intergenic not near genes chr3R 10906877 intergenic not near genes chr3R 10906973 intergenic not near genes chr3R_27_10905001 chr3R_10905001 RAL-307_125b 2760 chr3R 10919640 10919718 chr3R 10919768 10919841 28 126 7.0 5.0 6.0 4.0 201 chr3R 10919640 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919841 intergenic not near genes chr3R_28_10915001 chr3R_10915001 RAL-307_125b 2761 chr3R 10920004 10920074 chr3R 10920132 10920202 21 127 9.5 9.5 9.5 2.0 198 chr3R 10920004 intergenic not near genes chr3R 10920103 intergenic not near genes chr3R 10920202 intergenic not near genes chr3R_21_10920001 chr3R_10920001 RAL-307_125b 2762 chr3R 10957821 10957861 chr3R 10963260 10963284 Rt1c 10 5431 9.0 4.5 6.8 1.3 5463 chr3R 10957821 intergenic not near genes chr3R 10960552 intergenic not near genes chr3R 10963284 intergenic not near genes chr3R_10_10960001 chr3R_10960001 RAL-307_125b 2763 chr3R 10957863 10957882 chr3R 10963258 10963278 Rt1c 6 5418 5.5 4.5 5.0 1.0 5415 chr3R 10957863 intergenic not near genes chr3R 10960570 intergenic not near genes chr3R 10963278 intergenic not near genes chr3R_6_10960001 chr3R_10960001 RAL-307_125b 2764 chr3R 10971442 10971511 chr3R 10971583 10971614 25 134 11.5 8.5 10.0 2.3 172 chr3R 10971442 intergenic not near genes chr3R 10971528 intergenic not near genes chr3R 10971614 intergenic not near genes chr3R_25_10970001 chr3R_10970001 RAL-307_125b 2765 chr3R 10998429 10998469 chr3R 10998546 10998596 16 123 10.0 6.5 8.2 1.7 167 chr3R 10998429 intron CG34114 + chr3R 10998512 intron CG34114 + chr3R 10998596 intron CG34114 + chr3R_16_10995001 chr3R_10995001 RAL-307_125b 2766 chr3R 11043051 11043123 chr3R 11043207 11043279 28 152 3.5 4.0 3.8 5.8 228 chr3R 11043051 intron CG34114 + chr3R 11043165 intron CG34114 + chr3R 11043279 intron CG34114 + chr3R_28_11040001 chr3R_11040001 RAL-307_125b 2767 chr3R 11056844 11056895 chr3R 11056972 11057023 14 124 9.5 0.5 5.0 2.3 179 chr3R 11056844 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11057023 intergenic not near genes chr3R_14_11055001 chr3R_11055001 RAL-307_125b 2768 chr3R 11065542 11065616 chr3R 11071244 11071246 297 4 5684 4.0 7.0 5.5 0.6 5704 chr3R 11065542 intergenic not near genes chr3R 11068394 intergenic not near genes chr3R 11071246 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-307_125b 2769 chr3R 11087404 11087459 chr3R 11087519 11087585 14 118 6.0 8.0 7.0 1.8 181 chr3R 11087404 intergenic not near genes chr3R 11087494 intergenic not near genes chr3R 11087585 intergenic not near genes chr3R_14_11085001 chr3R_11085001 RAL-307_125b 2770 chr3R 11099607 11099684 chr3R 11099789 11099866 31 181 5.0 4.0 4.5 5.6 259 chr3R 11099607 intergenic not near genes chr3R 11099736 intergenic not near genes chr3R 11099866 intergenic not near genes chr3R_31_11095001 chr3R_11095001 RAL-307_125b 2771 chr3R 11102286 11102324 chr3R 11102417 11102430 6 125 13.5 6.0 9.8 0.6 144 chr3R 11102286 intergenic not near genes chr3R 11102358 intergenic not near genes chr3R 11102430 intergenic not near genes chr3R_6_11100001 chr3R_11100001 RAL-307_125b 2772 chr3R 11151081 11151151 chr3R 11151326 11151335 16 236 7.0 10.5 8.8 1.6 254 chr3R 11151081 3` UTR Ugt86Di - chr3R 11151208 3` UTR Ugt86Di - chr3R 11151335 3` UTR Ugt86Di - chr3R_16_11150001 chr3R_11150001 RAL-307_125b 2773 chr3R 11197944 11198011 chr3R 11198093 11198117 25 143 11.5 9.5 10.5 2.2 173 chr3R 11197944 intron cu + chr3R 11198030 intron cu + chr3R 11198117 intron cu + chr3R_25_11195001 chr3R_11195001 RAL-307_125b 2774 chr3R 11220235 11220314 chr3R 11220404 11220423 34 166 10.0 4.5 7.2 4.1 188 chr3R 11220235 intergenic CG6693 -,CG6689 - chr3R 11220329 3` UTR CG6693 - chr3R 11220423 3` UTR CG6693 - chr3R_34_11220001 chr3R_11220001 RAL-307_125b 2775 chr3R 11247200 11247211 chr3R 11247331 11247333 INE-1 6 130 29.0 6.5 17.8 0.3 133 chr3R 11247200 intergenic CG5214 +,CR43283 - chr3R 11247266 intergenic CR43283 -,CG5214 + chr3R 11247333 intergenic CR43283 -,CG5214 + chr3R_6_11245001 chr3R_11245001 RAL-307_125b 2776 chr3R 11247212 11247228 chr3R 11247328 11247359 INE-1 12 128 25.0 6.0 15.5 0.7 147 chr3R 11247212 intergenic CG5214 +,CR43283 - chr3R 11247286 intergenic CR43283 -,CG5214 + chr3R 11247359 intergenic CR43283 -,CG5214 + chr3R_12_11245001 chr3R_11245001 RAL-307_125b 2777 chr3R 11307159 11307223 chr3R 11307285 11307315 18 125 5.5 4.0 4.8 3.1 156 chr3R 11307159 intergenic not near genes chr3R 11307237 intergenic not near genes chr3R 11307315 intergenic not near genes chr3R_18_11305001 chr3R_11305001 RAL-307_125b 2778 chr3R 11342507 11342570 chr3R 11342633 11342696 25 125 12.5 13.5 13.0 1.8 189 chr3R 11342507 intron pros + chr3R 11342602 intron pros + chr3R 11342696 intron pros + chr3R_25_11340001 chr3R_11340001 RAL-307_125b 2779 chr3R 11379192 11379253 chr3R 11388397 11388406 roo 20 9196 16.0 13.5 14.8 1.3 9214 chr3R 11379192 intron pros + chr3R 11383799 intron pros + chr3R 11388406 intron pros + chr3R_20_11380001 chr3R_11380001 RAL-307_125b 2780 chr3R 11404898 11404970 chr3R 11405027 11405100 37 125 15.0 12.0 13.5 2.6 202 chr3R 11404898 3` UTR pros + chr3R 11404999 3` UTR pros + chr3R 11405100 3` UTR pros + chr3R_37_11400001 chr3R_11400001 RAL-307_125b 2781 chr3R 11442336 11442362 chr3R 11442529 11442577 18 225 12.0 12.0 12.0 1.4 241 chr3R 11442336 intron,intron sals -,CG17230 + chr3R 11442456 intron,intron sals -,CG17230 + chr3R 11442577 intron,intron sals -,CG17230 + chr3R_18_11440001 chr3R_11440001 RAL-307_125b 2782 chr3R 11471180 11471185 chr3R 15095975 15095980 4 3624795 19.0 45.0 32.0 0.1 3624800 chr3R 11471180 intergenic not near genes chr3R 13283580 exon CG8630 + chr3R 15095980 3` UTR CG42788 - chr3R_4_13280001 chr3R_13280001 RAL-307_125b 2783 chr3R 11518775 11518788 chr3R 11518916 11518929 9 140 16.5 5.0 10.8 0.8 154 chr3R 11518775 intergenic not near genes chr3R 11518852 intergenic not near genes chr3R 11518929 intergenic not near genes chr3R_9_11515001 chr3R_11515001 RAL-307_125b 2784 chr3R 11518796 11518839 chr3R 11518915 11518980 17 140 9.5 5.0 7.2 2.1 184 chr3R 11518796 intergenic not near genes chr3R 11518888 intergenic not near genes chr3R 11518980 intergenic not near genes chr3R_17_11515001 chr3R_11515001 RAL-307_125b 2785 chr3R 11664745 11664821 chr3R 11664887 11664963 27 140 0.0 5.0 2.5 7.7 218 chr3R 11664745 intron CG42327 + chr3R 11664854 intron CG42327 + chr3R 11664963 intron CG42327 + chr3R_27_11660001 chr3R_11660001 RAL-307_125b 2786 chr3R 11694682 11694730 chr3R 11694825 11694873 25 141 14.5 12.5 13.5 1.7 191 chr3R 11694682 intergenic Fer3 - chr3R 11694778 intergenic Fer3 - chr3R 11694873 intergenic not near genes chr3R_25_11690001 chr3R_11690001 RAL-307_125b 2787 chr3R 11694733 11694743 chr3R 11694823 11694886 5 132 11.0 12.5 11.8 0.4 153 chr3R 11694733 intergenic Fer3 - chr3R 11694810 intergenic Fer3 - chr3R 11694886 intergenic not near genes chr3R_5_11690001 chr3R_11690001 RAL-307_125b 2788 chr3R 11708673 11708715 chr3R 11708799 11708842 9 124 3.5 6.0 4.8 1.6 169 chr3R 11708673 intergenic not near genes chr3R 11708758 intergenic not near genes chr3R 11708842 intergenic not near genes chr3R_9_11705001 chr3R_11705001 RAL-307_125b 2789 chr3R 11734121 11734149 chr3R 11734287 11734318 10 163 14.0 3.5 8.8 1.0 197 chr3R 11734121 intergenic not near genes chr3R 11734220 intergenic not near genes chr3R 11734318 intergenic not near genes chr3R_10_11730001 chr3R_11730001 RAL-307_125b 2790 chr3R 11734152 11734185 chr3R 11734281 11734354 10 155 5.5 3.0 4.2 1.9 202 chr3R 11734152 intergenic not near genes chr3R 11734253 intergenic not near genes chr3R 11734354 intergenic not near genes chr3R_10_11730001 chr3R_11730001 RAL-307_125b 2791 chr3R 11740440 11740458 chr3R 11743497 11743515 18 3058 86.0 68.5 77.2 0.2 3075 chr3R 11740440 exon Blm - chr3R 11741978 5` UTR CG14722 + chr3R 11743515 exon CG14722 + chr3R_18_11740001 chr3R_11740001 RAL-307_125b 2792 chr3R 11740436 11740510 chr3R 11743517 11743567 47 3061 101.5 68.0 84.8 0.5 3131 chr3R 11740436 exon Blm - chr3R 11742002 5` UTR CG14722 + chr3R 11743567 exon CG14722 + chr3R_47_11740001 chr3R_11740001 RAL-307_125b 2793 chr3R 11830303 11830360 chr3R 11830437 11830494 30 132 14.0 15.0 14.5 1.9 191 chr3R 11830303 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830494 intron CG6959 - chr3R_30_11830001 chr3R_11830001 RAL-307_125b 2794 chr3R 11830925 11831002 chr3R 11831119 11831184 16 190 0.0 5.0 2.5 4.6 259 chr3R 11830925 intron CG6959 - chr3R 11831054 intron CG6959 - chr3R 11831184 intron CG6959 - chr3R_16_11830001 chr3R_11830001 RAL-307_125b 2795 chr3R 11841027 11841083 chr3R 11846257 11846324 BS 21 5228 7.5 12.5 10.0 1.9 5297 chr3R 11841027 intron CG6959 - chr3R 11843676 intron CG6959 - chr3R 11846324 intron CG6959 - chr3R_21_11840001 chr3R_11840001 RAL-307_125b 2796 chr3R 11853410 11853423 chr3R 11853599 11853622 8 196 14.0 14.0 14.0 0.5 212 chr3R 11853410 intron CG6959 - chr3R 11853516 intron CG6959 - chr3R 11853622 intron CG6959 - chr3R_8_11850001 chr3R_11850001 RAL-307_125b 2797 chr3R 11853426 11853469 chr3R 11853590 11853655 26 192 7.0 11.5 9.2 2.5 229 chr3R 11853426 intron CG6959 - chr3R 11853540 intron CG6959 - chr3R 11853655 intron CG6959 - chr3R_26_11850001 chr3R_11850001 RAL-307_125b 2798 chr3R 11853732 11853792 chr3R 11853887 11853947 29 155 13.0 12.5 12.8 2.1 215 chr3R 11853732 intron CG6959 - chr3R 11853840 intron CG6959 - chr3R 11853947 intron CG6959 - chr3R_29_11850001 chr3R_11850001 RAL-307_125b 2799 chr3R 11920933 11921002 chr3R 11921072 11921119 25 144 5.0 9.5 7.2 3.0 186 chr3R 11920933 intron Cad87A - chr3R 11921026 intron Cad87A - chr3R 11921119 intron Cad87A - chr3R_25_11920001 chr3R_11920001 RAL-307_125b 2800 chr3R 11990608 11990683 chr3R 11990746 11990821 21 138 5.5 4.5 5.0 3.5 213 chr3R 11990608 intron mfas - chr3R 11990714 intron mfas - chr3R 11990821 intron mfas - chr3R_21_11990001 chr3R_11990001 RAL-307_125b 2801 chr3R 11998917 11998964 chr3R 11999082 11999129 33 162 5.0 9.0 7.0 4.1 212 chr3R 11998917 intron Tk - chr3R 11999023 intron Tk - chr3R 11999129 intron Tk - chr3R_33_11995001 chr3R_11995001 RAL-307_125b 2802 chr3R 12016995 12017022 chr3R 12017122 12017144 9 125 8.0 17.5 12.8 0.7 149 chr3R 12016995 5` UTR CG3313 - chr3R 12017070 intergenic CG3313 -,Spt3 + chr3R 12017144 intergenic Spt3 +,CG3313 - chr3R_9_12015001 chr3R_12015001 RAL-307_125b 2803 chr3R 12022838 12022848 chr3R 12025065 12025075 pogo 10 2227 20.0 11.0 15.5 0.6 2237 chr3R 12022838 intergenic not near genes chr3R 12023956 intergenic not near genes chr3R 12025075 intergenic not near genes chr3R_10_12020001 chr3R_12020001 RAL-307_125b 2804 chr3R 12022850 12022910 chr3R 12025062 12025119 pogo 29 2224 8.0 10.5 9.2 2.8 2269 chr3R 12022850 intergenic not near genes chr3R 12023984 intergenic not near genes chr3R 12025119 intergenic not near genes chr3R_29_12020001 chr3R_12020001 RAL-307_125b 2805 chr3R 12029890 12029960 chr3R 12030027 12030097 24 135 9.0 3.5 6.2 3.3 207 chr3R 12029890 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029994 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030097 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_24_12025001 chr3R_12025001 RAL-307_125b 2806 chr3R 12045124 12045202 chr3R 12045250 12045328 37 123 8.5 7.5 8.0 4.1 204 chr3R 12045124 intergenic not near genes chr3R 12045226 intergenic not near genes chr3R 12045328 intergenic not near genes chr3R_37_12045001 chr3R_12045001 RAL-307_125b 2807 chr3R 12081966 12082030 chr3R 12082087 12082111 7 112 8.0 4.5 6.2 1.0 145 chr3R 12081966 intron CG14741 - chr3R 12082038 intron CG14741 - chr3R 12082111 intron CG14741 - chr3R_7_12080001 chr3R_12080001 RAL-307_125b 2808 chr3R 12169190 12169222 chr3R 12169318 12169350 15 128 27.5 14.5 21.0 0.7 160 chr3R 12169190 intergenic not near genes chr3R 12169270 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_15_12165001 chr3R_12165001 RAL-307_125b 2809 chr3R 12176632 12176701 chr3R 12176776 12176819 19 130 9.0 4.0 6.5 2.5 187 chr3R 12176632 intergenic not near genes chr3R 12176726 intergenic not near genes chr3R 12176819 intergenic not near genes chr3R_19_12175001 chr3R_12175001 RAL-307_125b 2810 chr3R 12183132 12183200 chr3R 12183268 12183336 28 134 4.5 9.5 7.0 3.5 204 chr3R 12183132 intergenic not near genes chr3R 12183234 intergenic not near genes chr3R 12183336 intergenic not near genes chr3R_28_12180001 chr3R_12180001 RAL-307_125b 2811 chr3R 12247093 12247167 chr3R 12247228 12247301 35 134 7.0 10.5 8.8 3.6 208 chr3R 12247093 intergenic not near genes chr3R 12247197 intergenic not near genes chr3R 12247301 intergenic not near genes chr3R_35_12245001 chr3R_12245001 RAL-307_125b 2812 chr3R 12267811 12267885 chr3R 12267941 12268014 27 129 13.0 12.5 12.8 2.0 203 chr3R 12267811 intron svp + chr3R 12267912 intron svp + chr3R 12268014 intron svp + chr3R_27_12265001 chr3R_12265001 RAL-307_125b 2813 chr3R 12274625 12274697 chr3R 12274801 12274865 28 172 7.0 10.0 8.5 2.9 240 chr3R 12274625 intron svp + chr3R 12274745 intron svp + chr3R 12274865 intron svp + chr3R_28_12270001 chr3R_12270001 RAL-307_125b 2814 chr3R 12297621 12297644 chr3R 12297729 12297768 6 114 8.0 12.0 10.0 0.5 147 chr3R 12297621 intron svp + chr3R 12297694 intron svp + chr3R 12297768 intron svp + chr3R_6_12295001 chr3R_12295001 RAL-307_125b 2815 chr3R 12307189 12307249 chr3R 12307322 12307382 27 132 8.0 8.5 8.2 2.9 193 chr3R 12307189 intergenic not near genes chr3R 12307286 intergenic not near genes chr3R 12307382 intergenic not near genes chr3R_27_12305001 chr3R_12305001 RAL-307_125b 2816 chr3R 12383822 12383859 chr3R 12383971 12384008 22 148 10.0 18.5 14.2 1.4 186 chr3R 12383822 intron GstD11 + chr3R 12383915 intron GstD11 + chr3R 12384008 intron GstD11 + chr3R_22_12380001 chr3R_12380001 RAL-307_125b 2817 chr3R 12392846 12392899 chr3R 12392990 12393035 19 143 8.5 11.5 10.0 1.7 189 chr3R 12392846 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392940 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393035 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_19_12390001 chr3R_12390001 RAL-307_125b 2818 chr3R 12445423 12445451 chr3R 12445595 12445602 4 167 26.0 27.5 26.8 0.1 179 chr3R 12445423 intron Desat1 + chr3R 12445512 intron Desat1 + chr3R 12445602 intron Desat1 + chr3R_4_12445001 chr3R_12445001 RAL-307_125b 2819 chr3R 12522310 12522384 chr3R 12522443 12522469 16 122 4.5 7.0 5.8 2.4 159 chr3R 12522310 5` UTR Octbeta3R - chr3R 12522390 5` UTR Octbeta3R - chr3R 12522469 5` UTR Octbeta3R - chr3R_16_12520001 chr3R_12520001 RAL-307_125b 2820 chr3R 12599335 12599402 chr3R 12599468 12599525 11 132 6.0 8.0 7.0 1.4 190 chr3R 12599335 intergenic not near genes chr3R 12599430 intergenic not near genes chr3R 12599525 intergenic not near genes chr3R_11_12595001 chr3R_12595001 RAL-307_125b 2821 chr3R 12605434 12605445 chr3R 12605568 12605579 9 133 5.5 10.5 8.0 1.0 145 chr3R 12605434 intergenic not near genes chr3R 12605506 intergenic not near genes chr3R 12605579 intergenic not near genes chr3R_9_12605001 chr3R_12605001 RAL-307_125b 2822 chr3R 12710211 12710272 chr3R 12713280 12713341 20 3072 47.0 63.0 55.0 0.4 3130 chr3R 12710211 exon mus308 - chr3R 12711776 exon mus308 - chr3R 12713341 3` UTR Men - chr3R_20_12710001 chr3R_12710001 RAL-307_125b 2823 chr3R 12725931 12725970 chr3R 12726047 12726125 10 143 4.0 1.5 2.8 2.6 194 chr3R 12725931 intergenic not near genes chr3R 12726028 intergenic not near genes chr3R 12726125 intergenic not near genes chr3R_10_12725001 chr3R_12725001 RAL-307_125b 2824 chr3R 12735132 12735181 chr3R 12735432 12735481 18 298 10.5 10.0 10.2 1.6 349 chr3R 12735132 intergenic not near genes chr3R 12735306 intergenic not near genes chr3R 12735481 intergenic not near genes chr3R_18_12735001 chr3R_12735001 RAL-307_125b 2825 chr3R 12748917 12748987 chr3R 12749060 12749110 35 141 11.5 8.0 9.8 3.2 193 chr3R 12748917 intron beat-Vc - chr3R 12749014 intron beat-Vc - chr3R 12749110 intron beat-Vc - chr3R_35_12745001 chr3R_12745001 RAL-307_125b 2826 chr3R 12763080 12763149 chr3R 12763218 12763276 21 129 0.5 15.0 7.8 2.4 196 chr3R 12763080 intron beat-Vc - chr3R 12763178 intron beat-Vc - chr3R 12763276 intron beat-Vc - chr3R_21_12760001 chr3R_12760001 RAL-307_125b 2827 chr3R 12787890 12787954 chr3R 12788023 12788086 31 132 9.5 10.5 10.0 2.8 196 chr3R 12787890 intergenic not near genes chr3R 12787988 intergenic not near genes chr3R 12788086 intergenic not near genes chr3R_31_12785001 chr3R_12785001 RAL-307_125b 2828 chr3R 12839433 12839506 chr3R 12839976 12840049 30 536 5.5 5.5 5.5 4.6 616 chr3R 12839433 intergenic not near genes chr3R 12839741 intergenic not near genes chr3R 12840049 intergenic not near genes chr3R_30_12835001 chr3R_12835001 RAL-307_125b 2829 chr3R 12864529 12864581 chr3R 12865064 12865116 roo 7 535 1.5 5.0 3.2 1.7 587 chr3R 12864529 intergenic not near genes chr3R 12864822 intergenic not near genes chr3R 12865116 intergenic not near genes chr3R_7_12860001 chr3R_12860001 RAL-307_125b 2830 chr3R 12866441 12866518 chr3R 12866640 12866649 37 197 8.0 12.0 10.0 3.4 208 chr3R 12866441 intergenic not near genes chr3R 12866545 intergenic not near genes chr3R 12866649 intergenic not near genes chr3R_37_12865001 chr3R_12865001 RAL-307_125b 2831 chr3R 12920116 12920136 chr3R 12925364 12925389 copia 9 5251 18.0 10.0 14.0 0.6 5273 chr3R 12920116 intron beat-Vb + chr3R 12922752 intron beat-Vb + chr3R 12925389 intron beat-Vb + chr3R_9_12920001 chr3R_12920001 RAL-307_125b 2832 chr3R 12920138 12920178 chr3R 12925361 12925412 copia 19 5245 7.5 9.5 8.5 2.0 5274 chr3R 12920138 intron beat-Vb + chr3R 12922775 intron beat-Vb + chr3R 12925412 intron beat-Vb + chr3R_19_12920001 chr3R_12920001 RAL-307_125b 2833 chr3R 13045792 13045840 chr3R 13052983 13053036 35 7192 45.0 71.0 58.0 0.6 7244 chr3R 13045792 exon Hsc70-2 + chr3R 13049414 3` UTR CG7966 - chr3R 13053036 intron pic + chr3R_35_13045001 chr3R_13045001 RAL-307_125b 2834 chr3R 13059918 13059977 chr3R 13060163 13060191 21 242 6.5 9.5 8.0 2.3 273 chr3R 13059918 intron sim + chr3R 13060054 intron sim + chr3R 13060191 intron sim + chr3R_21_13060001 chr3R_13060001 RAL-307_125b 2835 chr3R 6412323 6412324 chr3R 13062889 13062889 4 6650566 20.5 22.0 21.2 0.2 6650566 chr3R 6412323 intron gpp + chr3R 9737606 exon CG12950 - chr3R 13062889 intron sim + chr3R_4_9735001 chr3R_9735001 RAL-307_125b 2836 chr3R 13066956 13067131 chr3R 13067093 13067257 38 130 2.5 0.5 1.5 15.2 301 chr3R 13066956 intron sim + chr3R 13067106 intron sim + chr3R 13067257 intron sim + chr3R_38_13065001 chr3R_13065001 RAL-307_125b 2837 chr3R 13103969 13104002 chr3R 13104096 13104129 15 127 5.5 1.0 3.2 3.6 160 chr3R 13103969 intron timeout + chr3R 13104049 intron timeout + chr3R 13104129 intron timeout + chr3R_15_13100001 chr3R_13100001 RAL-307_125b 2838 chr3R 13120734 13120799 chr3R 13120851 13120920 22 119 9.0 7.0 8.0 2.4 186 chr3R 13120734 intron timeout + chr3R 13120827 intron timeout + chr3R 13120920 intron timeout + chr3R_22_13120001 chr3R_13120001 RAL-307_125b 2839 chr3R 13135785 13135847 chr3R 13138010 13138072 pogo 25 2225 6.5 6.0 6.2 3.5 2287 chr3R 13135785 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138072 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_25_13135001 chr3R_13135001 RAL-307_125b 2840 chr3R 13142994 13143008 chr3R 13148620 13148634 mdg3 5 5625 17.0 10.5 13.8 0.3 5640 chr3R 13142994 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145814 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148634 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13145001 chr3R_13145001 RAL-307_125b 2841 chr3R 13143011 13143066 chr3R 13148617 13148662 mdg3 20 5614 5.5 10.5 8.0 2.2 5651 chr3R 13143011 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148662 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_20_13145001 chr3R_13145001 RAL-307_125b 2842 chr3R 13194054 13194115 chr3R 13194693 13194754 20 639 13.0 10.5 11.8 1.6 700 chr3R 13194054 intergenic not near genes chr3R 13194404 intergenic not near genes chr3R 13194754 intergenic not near genes chr3R_20_13190001 chr3R_13190001 RAL-307_125b 2843 chr3R 13195906 13195925 chr3R 13196051 13196070 5 145 21.0 6.5 13.8 0.3 164 chr3R 13195906 intergenic not near genes chr3R 13195988 intergenic not near genes chr3R 13196070 intergenic not near genes chr3R_5_13195001 chr3R_13195001 RAL-307_125b 2844 chr3R 13195927 13195983 chr3R 13196048 13196113 22 136 5.5 6.0 5.8 3.2 186 chr3R 13195927 intergenic not near genes chr3R 13196020 intergenic not near genes chr3R 13196113 intergenic not near genes chr3R_22_13195001 chr3R_13195001 RAL-307_125b 2845 chr3R 13311585 13311640 chr3R 13318881 13318941 Doc 10 7300 20.5 3.0 11.8 0.8 7356 chr3R 13311585 exon CG32473 + chr3R 13315263 intergenic not near genes chr3R 13318941 intergenic CG45080 - chr3R_10_13315001 chr3R_13315001 RAL-307_125b 2846 chr3R 13357356 13357429 chr3R 13357698 13357772 17 338 24.0 20.0 22.0 0.7 416 chr3R 13357356 intergenic not near genes chr3R 13357564 intergenic not near genes chr3R 13357772 intergenic not near genes chr3R_17_13355001 chr3R_13355001 RAL-307_125b 2847 chr3R 13391593 13391656 chr3R 13391721 13391784 28 126 13.0 11.0 12.0 2.2 191 chr3R 13391593 intron CCHa2 - chr3R 13391688 intron CCHa2 - chr3R 13391784 intron CCHa2 - chr3R_28_13390001 chr3R_13390001 RAL-307_125b 2848 chr3R 13394637 13394701 chr3R 13395026 13395063 5 390 6.0 6.5 6.2 0.7 426 chr3R 13394637 intron CCHa2 - chr3R 13394850 intron CCHa2 - chr3R 13395063 5` UTR CCHa2 - chr3R_5_13390001 chr3R_13390001 RAL-307_125b 2849 chr3R 13400973 13401027 chr3R 13401114 13401168 27 140 10.0 1.0 5.5 4.2 195 chr3R 13400973 intron CG9796 - chr3R 13401070 intron CG9796 - chr3R 13401168 intron CG9796 - chr3R_27_13400001 chr3R_13400001 RAL-307_125b 2850 chr3R 13418619 13418684 chr3R 13418745 13418810 35 125 8.0 9.0 8.5 3.7 191 chr3R 13418619 intergenic not near genes chr3R 13418714 intergenic not near genes chr3R 13418810 intergenic not near genes chr3R_35_13415001 chr3R_13415001 RAL-307_125b 2851 chr3R 13478988 13479003 chr3R 13479093 13479129 6 117 9.5 11.5 10.5 0.5 141 chr3R 13478988 intergenic CR45589 + chr3R 13479058 intergenic CR45589 + chr3R 13479129 intergenic CR45589 + chr3R_6_13475001 chr3R_13475001 RAL-307_125b 2852 chr3R 13487482 13487493 chr3R 19199405 19199405 5 5711921 22.0 36.0 29.0 0.2 5711923 chr3R 13487482 intergenic not near genes chr3R 16343444 exon pad + chr3R 19199405 intron CG31475 + chr3R_5_16340001 chr3R_16340001 RAL-307_125b 2853 chr3R 13505811 13505862 chr3R 13505937 13505977 19 120 12.5 6.0 9.2 1.9 166 chr3R 13505811 intergenic not near genes chr3R 13505894 intergenic not near genes chr3R 13505977 intergenic not near genes chr3R_19_13505001 chr3R_13505001 RAL-307_125b 2854 chr3R 13517218 13517255 chr3R 13520085 13520121 jockey 12 2866 8.0 4.0 6.0 1.7 2903 chr3R 13517218 intergenic not near genes chr3R 13518670 intergenic not near genes chr3R 13520121 intergenic not near genes chr3R_12_13515001 chr3R_13515001 RAL-307_125b 2855 chr3R 13525150 13525211 chr3R 13525294 13525330 8 143 8.0 5.5 6.8 1.0 180 chr3R 13525150 intergenic not near genes chr3R 13525240 intergenic not near genes chr3R 13525330 intergenic not near genes chr3R_8_13525001 chr3R_13525001 RAL-307_125b 2856 chr3R 13568451 13568457 chr3R 13568565 13568584 4 124 12.5 9.0 10.8 0.3 133 chr3R 13568451 intergenic not near genes chr3R 13568518 intergenic not near genes chr3R 13568584 intergenic not near genes chr3R_4_13565001 chr3R_13565001 RAL-307_125b 2857 chr3R 13580800 13580820 chr3R 13580927 13580947 9 127 22.5 18.5 20.5 0.4 147 chr3R 13580800 intergenic not near genes chr3R 13580874 intergenic not near genes chr3R 13580947 intergenic not near genes chr3R_9_13580001 chr3R_13580001 RAL-307_125b 2858 chr3R 13599171 13599239 chr3R 13599332 13599400 28 161 5.0 12.0 8.5 2.9 229 chr3R 13599171 intergenic not near genes chr3R 13599286 intergenic not near genes chr3R 13599400 intergenic not near genes chr3R_28_13595001 chr3R_13595001 RAL-307_125b 2859 chr3R 13603011 13603032 chr3R 13603152 13603173 9 141 23.0 12.0 17.5 0.5 162 chr3R 13603011 intergenic not near genes chr3R 13603092 intergenic not near genes chr3R 13603173 intergenic not near genes chr3R_9_13600001 chr3R_13600001 RAL-307_125b 2860 chr3R 13603033 13603077 chr3R 13603147 13603218 21 137 11.0 10.5 10.8 1.8 185 chr3R 13603033 intergenic not near genes chr3R 13603126 intergenic not near genes chr3R 13603218 intergenic not near genes chr3R_21_13600001 chr3R_13600001 RAL-307_125b 2861 chr3R 13609508 13609514 chr3R 13609659 13609665 4 151 8.0 1.5 4.8 0.7 157 chr3R 13609508 intergenic CG9759 - chr3R 13609586 intergenic CG9759 - chr3R 13609665 intergenic CG9759 - chr3R_4_13605001 chr3R_13605001 RAL-307_125b 2862 chr3R 13609515 13609577 chr3R 13609658 13609721 15 144 1.5 1.5 1.5 6.0 206 chr3R 13609515 intergenic CG9759 - chr3R 13609618 intergenic CG9759 - chr3R 13609721 intergenic CG9759 - chr3R_15_13605001 chr3R_13605001 RAL-307_125b 2863 chr3R 13625646 13625716 chr3R 13625777 13625847 13 131 11.5 7.5 9.5 1.2 201 chr3R 13625646 intergenic not near genes chr3R 13625746 intergenic not near genes chr3R 13625847 intergenic not near genes chr3R_13_13625001 chr3R_13625001 RAL-307_125b 2864 chr3R 13659733 13659847 chr3R 13659925 13659985 10 165 0.0 1.0 0.5 6.7 252 chr3R 13659733 intron Hrb87F - chr3R 13659859 intron Hrb87F - chr3R 13659985 intron Hrb87F - chr3R_10_13655001 chr3R_13655001 RAL-307_125b 2865 chr3R 13672897 13672976 chr3R 13673025 13673065 37 126 14.0 14.0 14.0 2.5 168 chr3R 13672897 intron Task6 - chr3R 13672981 intron Task6 - chr3R 13673065 intron Task6 - chr3R_37_13670001 chr3R_13670001 RAL-307_125b 2866 chr3R 13692739 13692811 chr3R 13692867 13692919 42 125 12.5 14.0 13.2 3.0 180 chr3R 13692739 3` UTR flfl + chr3R 13692829 3` UTR flfl + chr3R 13692919 3` UTR flfl + chr3R_42_13690001 chr3R_13690001 RAL-307_125b 2867 chr3R 13745392 13745438 chr3R 13745549 13745606 9 166 7.5 2.0 4.8 1.6 214 chr3R 13745392 intron CG34383 + chr3R 13745499 intron CG34383 + chr3R 13745606 intron CG34383 + chr3R_9_13745001 chr3R_13745001 RAL-307_125b 2868 chr3R 13758092 13758170 chr3R 13758228 13758306 11 136 0.0 3.5 1.8 3.9 214 chr3R 13758092 intron CG34383 + chr3R 13758199 intron CG34383 + chr3R 13758306 intron CG34383 + chr3R_11_13755001 chr3R_13755001 RAL-307_125b 2869 chr3R 13782016 13782076 chr3R 13782147 13782207 18 130 7.0 9.0 8.0 2.0 191 chr3R 13782016 exon CG9286 + chr3R 13782112 intergenic CG9286 +,Dip-B + chr3R 13782207 intergenic Dip-B +,CG9286 + chr3R_18_13780001 chr3R_13780001 RAL-307_125b 2870 chr3R 13850260 13850342 chr3R 13850405 13850482 26 144 0.0 6.5 3.2 6.2 222 chr3R 13850260 intergenic not near genes chr3R 13850371 intergenic not near genes chr3R 13850482 intergenic not near genes chr3R_26_13850001 chr3R_13850001 RAL-307_125b 2871 chr3R 13863650 13863687 chr3R 13863773 13863815 15 134 12.5 11.0 11.8 1.2 165 chr3R 13863650 intergenic not near genes chr3R 13863732 intergenic not near genes chr3R 13863815 intergenic not near genes chr3R_15_13860001 chr3R_13860001 RAL-307_125b 2872 chr3R 13863689 13863698 chr3R 13863772 13863835 5 127 10.5 11.0 10.8 0.4 146 chr3R 13863689 intergenic not near genes chr3R 13863762 intergenic not near genes chr3R 13863835 intergenic not near genes chr3R_5_13860001 chr3R_13860001 RAL-307_125b 2873 chr3R 13909866 13909907 chr3R 13909995 13910019 19 125 9.5 12.5 11.0 1.6 153 chr3R 13909866 intergenic not near genes chr3R 13909942 intergenic not near genes chr3R 13910019 intergenic not near genes chr3R_19_13905001 chr3R_13905001 RAL-307_125b 2874 chr3R 13927211 13927229 chr3R 13927351 13927369 6 140 4.0 5.5 4.8 1.0 158 chr3R 13927211 intergenic not near genes chr3R 13927290 intergenic not near genes chr3R 13927369 intergenic not near genes chr3R_6_13925001 chr3R_13925001 RAL-307_125b 2875 chr3R 13948180 13948249 chr3R 13948308 13948372 19 125 6.0 7.0 6.5 2.5 192 chr3R 13948180 intergenic CG31517 + chr3R 13948276 intergenic CG31517 + chr3R 13948372 intergenic CG31517 + chr3R_19_13945001 chr3R_13945001 RAL-307_125b 2876 chr3R 13974485 13974491 chr3R 13974601 13974618 4 124 7.5 19.0 13.2 0.3 133 chr3R 13974485 intron,5` UTR rdx -,CR43460 + chr3R 13974552 intron,5` UTR rdx -,CR43460 + chr3R 13974618 intron,5` UTR rdx -,CR43460 + chr3R_4_13970001 chr3R_13970001 RAL-307_125b 2877 chr3R 13975333 13975339 chr3R 13975463 13975469 4 130 30.0 11.5 20.8 0.2 136 chr3R 13975333 intron rdx - chr3R 13975401 intron rdx - chr3R 13975469 intron rdx - chr3R_4_13975001 chr3R_13975001 RAL-307_125b 2878 chr3R 13975341 13975404 chr3R 13975456 13975479 48 126 9.0 11.0 10.0 4.4 138 chr3R 13975341 intron rdx - chr3R 13975410 intron rdx - chr3R 13975479 intron rdx - chr3R_48_13975001 chr3R_13975001 RAL-307_125b 2879 chr3R 13984339 13984393 chr3R 13984541 13984595 31 201 12.0 7.0 9.5 3.0 256 chr3R 13984339 intron rdx - chr3R 13984467 intron rdx - chr3R 13984595 intron rdx - chr3R_31_13980001 chr3R_13980001 RAL-307_125b 2880 chr3R 13994266 13994334 chr3R 13994571 13994628 27 301 4.5 11.5 8.0 3.0 362 chr3R 13994266 intron rdx - chr3R 13994447 intron rdx - chr3R 13994628 intron rdx - chr3R_27_13990001 chr3R_13990001 RAL-307_125b 2881 chr3R 14037535 14037589 chr3R 14037666 14037688 30 124 11.5 11.5 11.5 2.4 153 chr3R 14037535 intergenic not near genes chr3R 14037612 intergenic not near genes chr3R 14037688 intergenic not near genes chr3R_30_14035001 chr3R_14035001 RAL-307_125b 2882 chr3R 14066653 14066711 chr3R 14066816 14066855 5 152 3.5 3.0 3.2 1.2 202 chr3R 14066653 exon foxo + chr3R 14066754 exon foxo + chr3R 14066855 exon foxo + chr3R_5_14065001 chr3R_14065001 RAL-307_125b 2883 chr3R 14070078 14070143 chr3R 14070209 14070274 48 129 13.0 10.0 11.5 3.8 196 chr3R 14070078 intron foxo + chr3R 14070176 intron foxo + chr3R 14070274 intron foxo + chr3R_48_14070001 chr3R_14070001 RAL-307_125b 2884 chr3R 14079774 14079853 chr3R 14079906 14079985 19 132 3.5 4.0 3.8 4.0 211 chr3R 14079774 intron foxo + chr3R 14079880 intron foxo + chr3R 14079985 intron foxo + chr3R_19_14075001 chr3R_14075001 RAL-307_125b 2885 chr3R 14083368 14083393 chr3R 14083519 14083527 13 150 16.5 0.0 8.2 1.4 159 chr3R 14083368 intron foxo + chr3R 14083448 intron foxo + chr3R 14083527 intron foxo + chr3R_13_14080001 chr3R_14080001 RAL-307_125b 2886 chr3R 14091471 14091535 chr3R 14091600 14091663 34 128 10.5 7.5 9.0 3.4 192 chr3R 14091471 intron Npc2b + chr3R 14091567 intron Npc2b + chr3R 14091663 intron Npc2b + chr3R_34_14090001 chr3R_14090001 RAL-307_125b 2887 chr3R 14109043 14109107 chr3R 14109174 14109238 32 131 10.5 10.0 10.2 2.9 195 chr3R 14109043 intergenic CR44237 -,Or88a + chr3R 14109140 intergenic CR44237 -,Or88a + chr3R 14109238 intergenic CR44237 -,Or88a + chr3R_32_14105001 chr3R_14105001 RAL-307_125b 2888 chr3R 14117402 14117456 chr3R 14117527 14117582 5 117 11.0 12.5 11.8 0.4 180 chr3R 14117402 intron Kif19A - chr3R 14117492 intron Kif19A - chr3R 14117582 intron Kif19A - chr3R_5_14115001 chr3R_14115001 RAL-307_125b 2889 chr3R 14136142 14136267 chr3R 14136265 14136393 11 140 0.0 0.0 0.0 11.0 251 chr3R 14136142 intergenic not near genes chr3R 14136268 intergenic not near genes chr3R 14136393 intergenic not near genes chr3R_11_14135001 chr3R_14135001 RAL-307_125b 2890 chr3R 14168406 14168467 chr3R 14168544 14168605 22 137 2.0 10.5 6.2 3.1 199 chr3R 14168406 3` UTR Dop1R1 - chr3R 14168506 3` UTR Dop1R1 - chr3R 14168605 3` UTR Dop1R1 - chr3R_22_14165001 chr3R_14165001 RAL-307_125b 2891 chr3R 14170101 14170171 chr3R 14170241 14170311 26 138 15.0 7.5 11.2 2.1 210 chr3R 14170101 3` UTR Dop1R1 - chr3R 14170206 3` UTR Dop1R1 - chr3R 14170311 3` UTR Dop1R1 - chr3R_26_14170001 chr3R_14170001 RAL-307_125b 2892 chr3R 14180767 14180831 chr3R 14185582 14185646 F-element 33 4815 11.5 10.0 10.8 2.8 4879 chr3R 14180767 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185646 intron Dop1R1 - chr3R_33_14180001 chr3R_14180001 RAL-307_125b 2893 chr3R 14193685 14193753 chr3R 14193812 14193881 19 127 3.0 12.5 7.8 2.2 196 chr3R 14193685 intron Dop1R1 - chr3R 14193783 intron Dop1R1 - chr3R 14193881 intron Dop1R1 - chr3R_19_14190001 chr3R_14190001 RAL-307_125b 2894 chr3R 14194441 14194457 chr3R 14203614 14203636 roo 9 9178 8.5 0.5 4.5 1.6 9195 chr3R 14194441 intron Dop1R1 - chr3R 14199038 intron Dop1R1 - chr3R 14203636 intron Dop1R1 - chr3R_9_14195001 chr3R_14195001 RAL-307_125b 2895 chr3R 14246359 14246366 chr3R 14247905 14247912 jockey 4 1546 12.0 11.5 11.8 0.3 1553 chr3R 14246359 intergenic not near genes chr3R 14247136 intergenic not near genes chr3R 14247912 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-307_125b 2896 chr3R 14246371 14246407 chr3R 14247891 14247946 jockey 10 1533 7.0 7.0 7.0 1.2 1575 chr3R 14246371 intergenic not near genes chr3R 14247158 intergenic not near genes chr3R 14247946 intergenic not near genes chr3R_10_14245001 chr3R_14245001 RAL-307_125b 2897 chr3R 14248685 14248723 chr3R 14248813 14248821 11 125 11.0 0.0 5.5 1.7 136 chr3R 14248685 intergenic not near genes chr3R 14248753 intergenic not near genes chr3R 14248821 intergenic not near genes chr3R_11_14245001 chr3R_14245001 RAL-307_125b 2898 chr3R 14386166 14386236 chr3R 14386295 14386370 13 131 0.5 6.5 3.5 2.9 204 chr3R 14386166 intergenic not near genes chr3R 14386268 intergenic not near genes chr3R 14386370 intergenic not near genes chr3R_13_14385001 chr3R_14385001 RAL-307_125b 2899 chr3R 14440689 14440751 chr3R 14440815 14440867 8 123 5.0 18.0 11.5 0.6 178 chr3R 14440689 intron cv-c - chr3R 14440778 intron cv-c - chr3R 14440867 intron cv-c - chr3R_8_14440001 chr3R_14440001 RAL-307_125b 2900 chr3R 14489221 14489292 chr3R 14489627 14489697 25 397 6.0 14.0 10.0 2.3 476 chr3R 14489221 intergenic not near genes chr3R 14489459 intergenic not near genes chr3R 14489697 intergenic not near genes chr3R_25_14485001 chr3R_14485001 RAL-307_125b 2901 chr3R 14522968 14522984 chr3R 14523099 14523115 8 131 10.5 22.0 16.2 0.5 147 chr3R 14522968 intron,exon Pde6 -,Cyp313a1 + chr3R 14523042 intron,3` UTR Pde6 -,Cyp313a1 + chr3R 14523115 intron Pde6 - chr3R_8_14520001 chr3R_14520001 RAL-307_125b 2902 chr3R 14534678 14534757 chr3R 14534810 14534889 47 128 11.0 10.0 10.5 4.1 211 chr3R 14534678 intron Pde6 - chr3R 14534784 intron Pde6 - chr3R 14534889 intron Pde6 - chr3R_47_14530001 chr3R_14530001 RAL-307_125b 2903 chr3R 14545989 14546057 chr3R 14546116 14546146 24 122 8.0 2.5 5.2 3.9 157 chr3R 14545989 intron Pde6 - chr3R 14546068 intron Pde6 - chr3R 14546146 intron Pde6 - chr3R_24_14545001 chr3R_14545001 RAL-307_125b 2904 chr3R 14563978 14563991 chr3R 14564128 14564141 5 150 0.0 7.0 3.5 1.1 163 chr3R 14563978 intergenic CG8087 - chr3R 14564060 intergenic CG8087 - chr3R 14564141 intergenic CG8087 - chr3R_5_14560001 chr3R_14560001 RAL-307_125b 2905 chr3R 14608420 14608477 chr3R 14608562 14608619 29 142 7.5 8.0 7.8 3.3 199 chr3R 14608420 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608619 intergenic not near genes chr3R_29_14605001 chr3R_14605001 RAL-307_125b 2906 chr3R 14664837 14664900 chr3R 14664964 14665027 41 125 9.0 15.5 12.2 3.1 190 chr3R 14664837 intergenic BigH1 +,Meltrin - chr3R 14664932 3` UTR Meltrin - chr3R 14665027 3` UTR Meltrin - chr3R_41_14660001 chr3R_14660001 RAL-307_125b 2907 chr3R 14685740 14685803 chr3R 14685871 14685925 18 128 10.5 6.5 8.5 1.9 185 chr3R 14685740 intron Meltrin - chr3R 14685832 intron Meltrin - chr3R 14685925 intron Meltrin - chr3R_18_14685001 chr3R_14685001 RAL-307_125b 2908 chr3R 14694410 14694420 chr3R 14694540 14694549 5 130 32.5 13.0 22.8 0.2 139 chr3R 14694410 intron Meltrin - chr3R 14694480 intron Meltrin - chr3R 14694549 intron Meltrin - chr3R_5_14690001 chr3R_14690001 RAL-307_125b 2909 chr3R 14694423 14694489 chr3R 14694539 14694592 30 123 11.5 13.0 12.2 2.3 169 chr3R 14694423 intron Meltrin - chr3R 14694508 intron Meltrin - chr3R 14694592 intron Meltrin - chr3R_30_14690001 chr3R_14690001 RAL-307_125b 2910 chr3R 14704341 14704415 chr3R 14704468 14704517 32 122 11.0 11.5 11.2 2.6 176 chr3R 14704341 intron kibra - chr3R 14704429 intron kibra - chr3R 14704517 intron kibra - chr3R_32_14700001 chr3R_14700001 RAL-307_125b 2911 chr3R 14764549 14764577 chr3R 14764684 14764712 7 135 14.5 11.0 12.8 0.5 163 chr3R 14764549 intron jvl + chr3R 14764630 intron jvl + chr3R 14764712 intron jvl + chr3R_7_14760001 chr3R_14760001 RAL-307_125b 2912 chr3R 14787086 14787136 chr3R 14787550 14787600 15 459 12.5 10.0 11.2 1.2 514 chr3R 14787086 intron jvl + chr3R 14787343 intron jvl + chr3R 14787600 intron jvl + chr3R_15_14785001 chr3R_14785001 RAL-307_125b 2913 chr3R 14869825 14869847 chr3R 14869966 14869988 6 141 14.0 9.5 11.8 0.5 163 chr3R 14869825 intron btsz - chr3R 14869906 intron btsz - chr3R 14869988 intron btsz - chr3R_6_14865001 chr3R_14865001 RAL-307_125b 2914 chr3R 14869848 14869890 chr3R 14869964 14869990 18 135 7.0 9.0 8.0 2.0 142 chr3R 14869848 intron btsz - chr3R 14869919 intron btsz - chr3R 14869990 intron btsz - chr3R_18_14865001 chr3R_14865001 RAL-307_125b 2915 chr3R 14898433 14898493 chr3R 14898603 14898653 31 169 8.5 9.5 9.0 3.1 220 chr3R 14898433 intergenic Nup93-2 -,CG3817 + chr3R 14898543 intergenic Nup93-2 -,CG3817 + chr3R 14898653 intergenic CG3817 +,Nup93-2 - chr3R_31_14895001 chr3R_14895001 RAL-307_125b 2916 chr3R 14944856 14944889 chr3R 14944983 14945016 16 125 16.5 15.5 16.0 0.9 160 chr3R 14944856 intergenic not near genes chr3R 14944936 intergenic not near genes chr3R 14945016 intergenic not near genes chr3R_16_14940001 chr3R_14940001 RAL-307_125b 2917 chr3R 14958978 14959009 chr3R 14959212 14959230 6 231 17.0 5.5 11.2 0.5 252 chr3R 14958978 intergenic not near genes chr3R 14959104 intergenic not near genes chr3R 14959230 intergenic not near genes chr3R_6_14955001 chr3R_14955001 RAL-307_125b 2918 chr3R 15009316 15009379 chr3R 15009453 15009501 17 134 12.0 16.5 14.2 1.1 185 chr3R 15009316 intergenic not near genes chr3R 15009408 intergenic not near genes chr3R 15009501 intergenic not near genes chr3R_17_15005001 chr3R_15005001 RAL-307_125b 2919 chr3R 15041386 15041422 chr3R 15045204 15045240 Doc 9 3818 11.5 6.0 8.8 0.9 3854 chr3R 15041386 intergenic not near genes chr3R 15043313 intergenic not near genes chr3R 15045240 intergenic not near genes chr3R_9_15040001 chr3R_15040001 RAL-307_125b 2920 chr3R 15041424 15041445 chr3R 15045242 15045263 Doc 6 3818 7.0 8.0 7.5 0.7 3839 chr3R 15041424 intergenic not near genes chr3R 15043344 intergenic not near genes chr3R 15045263 intergenic not near genes chr3R_6_15040001 chr3R_15040001 RAL-307_125b 2921 chr3R 15058175 15058246 chr3R 15058305 15058381 30 132 10.0 8.0 9.0 3.0 206 chr3R 15058175 intron dpr9 - chr3R 15058278 intron dpr9 - chr3R 15058381 intron dpr9 - chr3R_30_15055001 chr3R_15055001 RAL-307_125b 2922 chr3R 15059270 15059480 chr3R 15059548 15059617 BS 16 216 0.0 9.0 4.5 2.9 347 chr3R 15059270 intron dpr9 - chr3R 15059444 intron dpr9 - chr3R 15059617 intron dpr9 - chr3R_16_15055001 chr3R_15055001 RAL-307_125b 2923 chr3R 15060995 15061030 chr3R 15061126 15061161 18 131 13.0 8.5 10.8 1.5 166 chr3R 15060995 intron dpr9 - chr3R 15061078 intron dpr9 - chr3R 15061161 intron dpr9 - chr3R_18_15060001 chr3R_15060001 RAL-307_125b 2924 chr3R 15079764 15079829 chr3R 15080055 15080120 pogo 30 287 11.5 7.0 9.2 2.9 356 chr3R 15079764 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080120 3` UTR CG6966 - chr3R_30_15075001 chr3R_15075001 RAL-307_125b 2925 chr3R 15088045 15088105 chr3R 15088193 15088253 20 147 4.5 8.5 6.5 2.7 208 chr3R 15088045 intron CG6966 - chr3R 15088149 intron CG6966 - chr3R 15088253 intron CG6966 - chr3R_20_15085001 chr3R_15085001 RAL-307_125b 2926 chr3R 15102450 15102455 chr3R 15109757 15109762 412 4 7307 29.0 6.5 17.8 0.2 7312 chr3R 15102450 intron CG42788 - chr3R 15106106 intron CG42788 - chr3R 15109762 intron CG42788 - chr3R_4_15105001 chr3R_15105001 RAL-307_125b 2927 chr3R 15102457 15102511 chr3R 15109752 15109818 412 34 7306 10.0 6.0 8.0 3.8 7361 chr3R 15102457 intron CG42788 - chr3R 15106138 intron CG42788 - chr3R 15109818 intron CG42788 - chr3R_34_15105001 chr3R_15105001 RAL-307_125b 2928 chr3R 15114866 15114906 chr3R 15114992 15115032 21 126 12.5 8.5 10.5 1.8 166 chr3R 15114866 intron CG42788 - chr3R 15114949 intron CG42788 - chr3R 15115032 intron CG42788 - chr3R_21_15110001 chr3R_15110001 RAL-307_125b 2929 chr3R 15132032 15132048 chr3R 15135131 15135157 Juan 18 3108 28.5 24.5 26.5 0.7 3125 chr3R 15132032 intergenic CG42788 - chr3R 15133594 intergenic not near genes chr3R 15135157 3` UTR CG6912 - chr3R_18_15130001 chr3R_15130001 RAL-307_125b 2930 chr3R 15132049 15132078 chr3R 15135124 15135135 Juan 26 3106 16.0 21.0 18.5 1.3 3086 chr3R 15132049 intergenic CG42788 - chr3R 15133592 intergenic not near genes chr3R 15135135 intergenic CG6912 - chr3R_26_15130001 chr3R_15130001 RAL-307_125b 2931 chr3R 15130866 15130906 chr3R 15141177 15141233 20 10316 42.0 51.0 46.5 0.4 10367 chr3R 15130866 intron CG42788 - chr3R 15136050 exon CG6912 - chr3R 15141233 exon CG3987 + chr3R_20_15135001 chr3R_15135001 RAL-307_125b 2932 chr3R 15162499 15162561 chr3R 15167317 15167379 F-element 21 4816 16.5 11.5 14.0 1.4 4880 chr3R 15162499 intron Gyc88E + chr3R 15164939 intron Gyc88E + chr3R 15167379 intron Gyc88E + chr3R_21_15160001 chr3R_15160001 RAL-307_125b 2933 chr3R 15190612 15190673 chr3R 15190787 15190848 36 175 10.0 11.5 10.8 3.1 236 chr3R 15190612 3` UTR Gyc88E + chr3R 15190730 3` UTR Gyc88E + chr3R 15190848 3` UTR Gyc88E + chr3R_36_15190001 chr3R_15190001 RAL-307_125b 2934 chr3R 15445861 15445905 chr3R 15445995 15446040 22 134 12.0 0.5 6.2 3.1 179 chr3R 15445861 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446040 intron AdamTS-A - chr3R_22_15445001 chr3R_15445001 RAL-307_125b 2935 chr3R 15566367 15566445 chr3R 15566501 15566579 33 131 5.5 6.5 6.0 4.7 212 chr3R 15566367 intergenic not near genes chr3R 15566473 intergenic not near genes chr3R 15566579 intergenic not near genes chr3R_33_15565001 chr3R_15565001 RAL-307_125b 2936 chr3R 15576401 15576405 chr3R 15576534 15576538 4 133 7.5 8.0 7.8 0.5 137 chr3R 15576401 intergenic not near genes chr3R 15576470 intergenic not near genes chr3R 15576538 intergenic not near genes chr3R_4_15575001 chr3R_15575001 RAL-307_125b 2937 chr3R 15594656 15594672 chr3R 15594765 15594805 8 130 0.0 14.0 7.0 1.0 149 chr3R 15594656 intergenic not near genes chr3R 15594730 intergenic not near genes chr3R 15594805 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RAL-307_125b 2938 chr3R 15601131 15601189 chr3R 15608698 15608761 412 32 7568 9.0 10.5 9.8 3.0 7630 chr3R 15601131 intergenic not near genes chr3R 15604946 intergenic not near genes chr3R 15608761 intergenic not near genes chr3R_32_15600001 chr3R_15600001 RAL-307_125b 2939 chr3R 15608752 15608785 chr3R 15609029 15609063 14 278 13.5 6.0 9.8 1.3 311 chr3R 15608752 intergenic not near genes chr3R 15608908 intergenic not near genes chr3R 15609063 intergenic not near genes chr3R_14_15605001 chr3R_15605001 RAL-307_125b 2940 chr3R 15608788 15608818 chr3R 15609023 15609079 10 264 7.5 6.0 6.8 1.3 291 chr3R 15608788 intergenic not near genes chr3R 15608934 intergenic not near genes chr3R 15609079 intergenic not near genes chr3R_10_15605001 chr3R_15605001 RAL-307_125b 2941 chr3R 15618701 15618763 chr3R 15626225 15626287 blood 28 7521 3.5 8.0 5.8 4.1 7586 chr3R 15618701 intergenic not near genes chr3R 15622494 intergenic not near genes chr3R 15626287 intergenic not near genes chr3R_28_15620001 chr3R_15620001 RAL-307_125b 2942 chr3R 15667966 15668039 chr3R 15668105 15668178 28 138 13.0 8.5 10.8 2.4 212 chr3R 15667966 intron pxb + chr3R 15668072 intron,5` UTR pxb +,CR43849 + chr3R 15668178 intron,intron pxb +,CR43849 + chr3R_28_15665001 chr3R_15665001 RAL-307_125b 2943 chr3R 15676505 15676581 chr3R 15676634 15676699 39 125 8.5 8.0 8.2 4.2 194 chr3R 15676505 intron pxb + chr3R 15676602 intron pxb + chr3R 15676699 intron pxb + chr3R_39_15675001 chr3R_15675001 RAL-307_125b 2944 chr3R 15702834 15702893 chr3R 15703057 15703133 15 233 0.5 11.0 5.8 2.2 299 chr3R 15702834 intergenic not near genes chr3R 15702984 intergenic not near genes chr3R 15703133 intergenic not near genes chr3R_15_15700001 chr3R_15700001 RAL-307_125b 2945 chr3R 15715757 15715768 chr3R 15715892 15715903 8 135 27.0 5.0 16.0 0.5 146 chr3R 15715757 exon CG31294 - chr3R 15715830 exon CG31294 - chr3R 15715903 intron CG31294 - chr3R_8_15715001 chr3R_15715001 RAL-307_125b 2946 chr3R 15715770 15715833 chr3R 15715888 15715968 29 131 11.0 4.0 7.5 3.4 198 chr3R 15715770 exon CG31294 - chr3R 15715869 intron CG31294 - chr3R 15715968 exon CG31294 - chr3R_29_15715001 chr3R_15715001 RAL-307_125b 2947 chr3R 15734143 15734168 chr3R 15734284 15734298 7 135 12.0 15.0 13.5 0.5 155 chr3R 15734143 intergenic not near genes chr3R 15734220 intergenic not near genes chr3R 15734298 intergenic not near genes chr3R_7_15730001 chr3R_15730001 RAL-307_125b 2948 chr3R 15734169 15734195 chr3R 15734266 15734311 9 115 7.0 9.5 8.2 1.0 142 chr3R 15734169 intergenic not near genes chr3R 15734240 intergenic not near genes chr3R 15734311 intergenic not near genes chr3R_9_15730001 chr3R_15730001 RAL-307_125b 2949 chr3R 15735193 15735235 chr3R 15739963 15740004 F-element 24 4770 9.0 9.5 9.2 2.4 4811 chr3R 15735193 intergenic not near genes chr3R 15737598 intergenic not near genes chr3R 15740004 intergenic not near genes chr3R_24_15735001 chr3R_15735001 RAL-307_125b 2950 chr3R 15743829 15743845 chr3R 15743989 15744007 11 162 23.5 12.5 18.0 0.6 178 chr3R 15743829 intergenic not near genes chr3R 15743918 intergenic not near genes chr3R 15744007 intergenic not near genes chr3R_11_15740001 chr3R_15740001 RAL-307_125b 2951 chr3R 15743846 15743897 chr3R 15743982 15744056 25 158 10.5 10.0 10.2 2.2 210 chr3R 15743846 intergenic not near genes chr3R 15743951 intergenic not near genes chr3R 15744056 intergenic not near genes chr3R_25_15740001 chr3R_15740001 RAL-307_125b 2952 chr3R 15811471 15811487 chr3R 15811755 15811777 10 288 19.5 8.5 14.0 0.7 306 chr3R 15811471 intron alpha-Man-IIb + chr3R 15811624 intron alpha-Man-IIb + chr3R 15811777 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_10_15810001 chr3R_15810001 RAL-307_125b 2953 chr3R 15811490 15811521 chr3R 15811748 15811809 22 279 12.0 7.0 9.5 2.1 319 chr3R 15811490 intron alpha-Man-IIb + chr3R 15811650 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R 15811809 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_22_15810001 chr3R_15810001 RAL-307_125b 2954 chr3R 15891616 15891686 chr3R 15892058 15892127 25 436 8.5 8.5 8.5 2.6 511 chr3R 15891616 intron CG14877 - chr3R 15891872 intron CG14877 - chr3R 15892127 intron CG14877 - chr3R_25_15890001 chr3R_15890001 RAL-307_125b 2955 chr3R 15892612 15892680 chr3R 15892740 15892811 34 129 10.5 14.5 12.5 2.5 199 chr3R 15892612 intron CG14877 - chr3R 15892712 intron CG14877 - chr3R 15892811 intron CG14877 - chr3R_34_15890001 chr3R_15890001 RAL-307_125b 2956 chr3R 16023813 16023890 chr3R 16023940 16024017 15 120 4.0 3.5 3.8 3.1 204 chr3R 16023813 intergenic not near genes chr3R 16023915 intergenic not near genes chr3R 16024017 intergenic not near genes chr3R_15_16020001 chr3R_16020001 RAL-307_125b 2957 chr3R 16033375 16033428 chr3R 16033506 16033559 22 131 6.0 10.5 8.2 2.4 184 chr3R 16033375 intron pnr + chr3R 16033467 intron pnr + chr3R 16033559 intron pnr + chr3R_22_16030001 chr3R_16030001 RAL-307_125b 2958 chr3R 16195503 16195580 chr3R 16195774 16195851 41 265 10.0 6.0 8.0 4.6 348 chr3R 16195503 intron sra + chr3R 16195677 intron sra + chr3R 16195851 intron sra + chr3R_41_16195001 chr3R_16195001 RAL-307_125b 2959 chr3R 16246473 16246553 chr3R 16246599 16246670 18 125 8.0 16.5 12.2 1.4 197 chr3R 16246473 intron tara + chr3R 16246572 intron tara + chr3R 16246670 intron tara + chr3R_18_16245001 chr3R_16245001 RAL-307_125b 2960 chr3R 16374253 16374324 chr3R 16374420 16374491 25 165 10.5 12.5 11.5 2.0 238 chr3R 16374253 intergenic ss - chr3R 16374372 intergenic ss - chr3R 16374491 3` UTR ss - chr3R_25_16370001 chr3R_16370001 RAL-307_125b 2961 chr3R 16472540 16472585 chr3R 16472666 16472711 7 118 12.0 13.0 12.5 0.5 171 chr3R 16472540 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472711 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-307_125b 2962 chr3R 16519889 16519897 chr3R 16520032 16520040 5 143 12.5 7.0 9.8 0.5 151 chr3R 16519889 intron CG42342 + chr3R 16519964 intron CG42342 + chr3R 16520040 intron CG42342 + chr3R_5_16515001 chr3R_16515001 RAL-307_125b 2963 chr3R 16519900 16519932 chr3R 16520031 16520034 13 135 8.5 6.5 7.5 1.5 134 chr3R 16519900 intron CG42342 + chr3R 16519967 intron CG42342 + chr3R 16520034 intron CG42342 + chr3R_13_16515001 chr3R_16515001 RAL-307_125b 2964 chr3R 16520577 16520613 chr3R 16520677 16520742 7 125 3.0 12.0 7.5 0.8 165 chr3R 16520577 intron CG42342 + chr3R 16520660 intron CG42342 + chr3R 16520742 intron CG42342 + chr3R_7_16520001 chr3R_16520001 RAL-307_125b 2965 chr3R 16534405 16534453 chr3R 16534543 16534591 17 137 8.5 5.0 6.8 2.2 186 chr3R 16534405 intron CG42342 + chr3R 16534498 intron CG42342 + chr3R 16534591 intron CG42342 + chr3R_17_16530001 chr3R_16530001 RAL-307_125b 2966 chr3R 16563680 16563691 chr3R 16563809 16563820 9 129 12.0 23.0 17.5 0.5 140 chr3R 16563680 intron CG42342 + chr3R 16563750 intron CG42342 + chr3R 16563820 intron CG42342 + chr3R_9_16560001 chr3R_16560001 RAL-307_125b 2967 chr3R 16563695 16563701 chr3R 16563797 16563830 7 124 10.5 18.5 14.5 0.5 135 chr3R 16563695 intron CG42342 + chr3R 16563762 intron CG42342 + chr3R 16563830 intron CG42342 + chr3R_7_16560001 chr3R_16560001 RAL-307_125b 2968 chr3R 16582871 16582918 chr3R 16582989 16583047 14 120 5.0 7.0 6.0 2.0 176 chr3R 16582871 intron Scp2 - chr3R 16582959 intron Scp2 - chr3R 16583047 intron Scp2 - chr3R_14_16580001 chr3R_16580001 RAL-307_125b 2969 chr3R 16633650 16633676 chr3R 16633799 16633826 6 150 27.0 16.5 21.8 0.3 176 chr3R 16633650 intron Fas1 + chr3R 16633738 intron Fas1 + chr3R 16633826 intron Fas1 + chr3R_6_16630001 chr3R_16630001 RAL-307_125b 2970 chr3R 16734825 16734895 chr3R 16734958 16735028 14 128 2.5 3.5 3.0 3.5 203 chr3R 16734825 intergenic Ubx - chr3R 16734926 intergenic Ubx - chr3R 16735028 intergenic not near genes chr3R_14_16730001 chr3R_16730001 RAL-307_125b 2971 chr3R 16735820 16735869 chr3R 16736015 16736085 17 207 9.5 11.5 10.5 1.5 265 chr3R 16735820 intergenic not near genes chr3R 16735952 intergenic not near genes chr3R 16736085 intergenic not near genes chr3R_17_16735001 chr3R_16735001 RAL-307_125b 2972 chr3R 16756275 16756353 chr3R 16762516 16762539 diver 11 6234 3.5 3.0 3.2 2.6 6264 chr3R 16756275 intron bxd - chr3R 16759407 intron bxd - chr3R 16762539 intron bxd - chr3R_11_16755001 chr3R_16755001 RAL-307_125b 2973 chr3R 16797402 16797466 chr3R 16797562 16797626 25 156 6.0 10.5 8.2 2.7 224 chr3R 16797402 intergenic not near genes chr3R 16797514 intergenic not near genes chr3R 16797626 intergenic not near genes chr3R_25_16795001 chr3R_16795001 RAL-307_125b 2974 chr3R 16889918 16889950 chr3R 16890045 16890077 7 127 14.0 6.0 10.0 0.6 159 chr3R 16889918 intron iab-8 - chr3R 16889998 intron iab-8 - chr3R 16890077 3` UTR iab-8 - chr3R_7_16885001 chr3R_16885001 RAL-307_125b 2975 chr3R 16889952 16889983 chr3R 16890037 16890074 7 104 6.0 4.5 5.2 1.1 122 chr3R 16889952 intron iab-8 - chr3R 16890013 intron iab-8 - chr3R 16890074 3` UTR iab-8 - chr3R_7_16890001 chr3R_16890001 RAL-307_125b 2976 chr3R 17099519 17099546 chr3R 17099645 17099645 16 121 23.5 15.0 19.2 0.8 126 chr3R 17099519 intron cher - chr3R 17099582 intron cher - chr3R 17099645 intron cher - chr3R_16_17095001 chr3R_17095001 RAL-307_125b 2977 chr3R 17121490 17121549 chr3R 17121735 17121794 27 244 10.5 14.5 12.5 2.0 304 chr3R 17121490 intron cher - chr3R 17121642 intron,exon cher -,CG42779 + chr3R 17121794 intron,3` UTR cher -,CG42779 + chr3R_27_17120001 chr3R_17120001 RAL-307_125b 2978 chr3R 17179946 17179954 chr3R 17180091 17180099 6 145 19.0 16.5 17.8 0.3 153 chr3R 17179946 intron Mur89F - chr3R 17180022 intron Mur89F - chr3R 17180099 intron Mur89F - chr3R_6_17180001 chr3R_17180001 RAL-307_125b 2979 chr3R 17179955 17179990 chr3R 17180090 17180135 19 143 12.5 16.5 14.5 1.2 180 chr3R 17179955 intron Mur89F - chr3R 17180045 intron Mur89F - chr3R 17180135 intron Mur89F - chr3R_19_17180001 chr3R_17180001 RAL-307_125b 2980 chr3R 17268623 17268698 chr3R 17268795 17268870 19 171 9.0 7.0 8.0 2.1 247 chr3R 17268623 intergenic not near genes chr3R 17268746 intergenic not near genes chr3R 17268870 intergenic not near genes chr3R_19_17265001 chr3R_17265001 RAL-307_125b 2981 chr3R 17290397 17290469 chr3R 17290533 17290594 32 135 7.5 5.5 6.5 4.3 197 chr3R 17290397 intergenic not near genes chr3R 17290496 intergenic not near genes chr3R 17290594 intergenic not near genes chr3R_32_17290001 chr3R_17290001 RAL-307_125b 2982 chr3R 17294620 17294705 chr3R 17295098 17295188 BS 14 479 4.0 1.0 2.5 4.0 568 chr3R 17294620 intergenic not near genes chr3R 17294904 intergenic not near genes chr3R 17295188 intergenic not near genes chr3R_14_17290001 chr3R_17290001 RAL-307_125b 2983 chr3R 17346648 17346706 chr3R 17348261 17348317 F-element 35 1613 14.0 17.0 15.5 2.1 1669 chr3R 17346648 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348317 intron beat-IIa - chr3R_35_17345001 chr3R_17345001 RAL-307_125b 2984 chr3R 17354779 17354817 chr3R 17354961 17354999 6 182 1.0 4.5 2.8 1.6 220 chr3R 17354779 intron beat-IIa - chr3R 17354889 intron beat-IIa - chr3R 17354999 intron beat-IIa - chr3R_6_17350001 chr3R_17350001 RAL-307_125b 2985 chr3R 17355450 17355520 chr3R 17355574 17355638 29 123 15.5 14.0 14.8 1.8 188 chr3R 17355450 intron beat-IIa - chr3R 17355544 intron beat-IIa - chr3R 17355638 intron beat-IIa - chr3R_29_17355001 chr3R_17355001 RAL-307_125b 2986 chr3R 17358981 17359055 chr3R 17359109 17359183 43 125 11.0 11.5 11.2 3.5 202 chr3R 17358981 intron beat-IIa - chr3R 17359082 intron beat-IIa - chr3R 17359183 intron beat-IIa - chr3R_43_17355001 chr3R_17355001 RAL-307_125b 2987 chr3R 17371415 17371433 chr3R 17371487 17371537 4 89 6.0 6.0 6.0 0.6 122 chr3R 17371415 3` UTR CR44256 - chr3R 17371476 3` UTR CR44256 - chr3R 17371537 3` UTR CR44256 - chr3R_4_17370001 chr3R_17370001 RAL-307_125b 2988 chr3R 17394402 17394466 chr3R 17394603 17394680 35 206 11.0 5.5 8.2 3.8 278 chr3R 17394402 intron CREG - chr3R 17394541 5` UTR CREG - chr3R 17394680 intergenic CREG - chr3R_35_17390001 chr3R_17390001 RAL-307_125b 2989 chr3R 17452633 17452697 chr3R 17452759 17452823 19 125 2.0 11.5 6.8 2.4 190 chr3R 17452633 intergenic not near genes chr3R 17452728 intergenic not near genes chr3R 17452823 intergenic not near genes chr3R_19_17450001 chr3R_17450001 RAL-307_125b 2990 chr3R 17461150 17461227 chr3R 17461282 17461353 45 131 10.5 10.0 10.2 4.0 203 chr3R 17461150 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461353 intergenic not near genes chr3R_45_17460001 chr3R_17460001 RAL-307_125b 2991 chr3R 17509213 17509242 chr3R 17516808 17516825 412 7 7589 7.0 8.5 7.8 0.8 7612 chr3R 17509213 intergenic not near genes chr3R 17513019 intergenic not near genes chr3R 17516825 intergenic not near genes chr3R_7_17510001 chr3R_17510001 RAL-307_125b 2992 chr3R 17521572 17521579 chr3R 17521754 17521774 8 193 8.0 10.5 9.2 0.8 202 chr3R 17521572 intergenic not near genes chr3R 17521673 intergenic not near genes chr3R 17521774 intergenic not near genes chr3R_8_17520001 chr3R_17520001 RAL-307_125b 2993 chr3R 17522170 17522197 chr3R 17522312 17522315 5 135 14.5 0.0 7.2 0.6 145 chr3R 17522170 intergenic not near genes chr3R 17522242 intergenic not near genes chr3R 17522315 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-307_125b 2994 chr3R 17571541 17571552 chr3R 17571671 17571683 9 130 19.0 8.5 13.8 0.6 142 chr3R 17571541 intergenic not near genes chr3R 17571612 intergenic not near genes chr3R 17571683 intergenic not near genes chr3R_9_17570001 chr3R_17570001 RAL-307_125b 2995 chr3R 17571554 17571575 chr3R 17571670 17571706 9 129 17.5 8.0 12.8 0.7 152 chr3R 17571554 intergenic not near genes chr3R 17571630 intergenic not near genes chr3R 17571706 intergenic not near genes chr3R_9_17570001 chr3R_17570001 RAL-307_125b 2996 chr3R 17571576 17571606 chr3R 17571666 17571737 17 128 10.0 7.0 8.5 1.8 161 chr3R 17571576 intergenic not near genes chr3R 17571656 intergenic not near genes chr3R 17571737 intergenic not near genes chr3R_17_17570001 chr3R_17570001 RAL-307_125b 2997 chr3R 17587182 17587242 chr3R 17587399 17587449 20 228 4.0 8.0 6.0 2.9 267 chr3R 17587182 intergenic not near genes chr3R 17587316 intergenic not near genes chr3R 17587449 intergenic not near genes chr3R_20_17585001 chr3R_17585001 RAL-307_125b 2998 chr3R 17591247 17591307 chr3R 17591731 17591793 F-element 17 480 11.0 8.0 9.5 1.6 546 chr3R 17591247 intergenic not near genes chr3R 17591520 intergenic not near genes chr3R 17591793 intergenic not near genes chr3R_17_17590001 chr3R_17590001 RAL-307_125b 2999 chr3R 17638309 17638335 chr3R 17638845 17638871 roo 17 536 0.5 22.0 11.2 1.4 562 chr3R 17638309 intron CG43175 + chr3R 17638590 intron CG43175 + chr3R 17638871 intron,intron CG43175 +,CR45222 + chr3R_17_17635001 chr3R_17635001 RAL-307_125b 3000 chr3R 17701342 17701366 chr3R 17701475 17701493 9 129 7.5 6.0 6.8 1.2 151 chr3R 17701342 intron osa - chr3R 17701418 intron osa - chr3R 17701493 intron osa - chr3R_9_17700001 chr3R_17700001 RAL-307_125b 3001 chr3R 17701374 17701385 chr3R 17701471 17701485 4 116 5.5 5.5 5.5 0.6 111 chr3R 17701374 intron osa - chr3R 17701430 intron osa - chr3R 17701485 intron osa - chr3R_4_17700001 chr3R_17700001 RAL-307_125b 3002 chr3R 17723272 17723333 chr3R 17723400 17723466 26 130 11.5 10.5 11.0 2.2 194 chr3R 17723272 intergenic Pxt + chr3R 17723369 intergenic Pxt + chr3R 17723466 intergenic not near genes chr3R_26_17720001 chr3R_17720001 RAL-307_125b 3003 chr3R 17725022 17725085 chr3R 17725166 17725215 17 137 6.0 0.0 3.0 4.2 193 chr3R 17725022 5` UTR Atg8b - chr3R 17725118 intergenic Atg8b - chr3R 17725215 intergenic Atg8b - chr3R_17_17725001 chr3R_17725001 RAL-307_125b 3004 chr3R 17773347 17773389 chr3R 17773477 17773519 21 128 10.0 7.0 8.5 2.2 172 chr3R 17773347 exon CG43102 - chr3R 17773433 intron CG43102 - chr3R 17773519 exon CG43102 - chr3R_21_17770001 chr3R_17770001 RAL-307_125b 3005 chr3R 17811154 17811182 chr3R 17811279 17811291 6 125 15.5 0.0 7.8 0.7 137 chr3R 17811154 intergenic CG18012 -,tinc + chr3R 17811222 intergenic CG18012 -,tinc + chr3R 17811291 intergenic CG18012 -,tinc + chr3R_6_17810001 chr3R_17810001 RAL-307_125b 3006 chr3R 17814729 17814797 chr3R 17814857 17814932 24 133 4.5 12.0 8.2 2.6 203 chr3R 17814729 intron tinc + chr3R 17814830 intron tinc + chr3R 17814932 intron tinc + chr3R_24_17810001 chr3R_17810001 RAL-307_125b 3007 chr3R 17823158 17823235 chr3R 17823293 17823368 24 133 6.0 6.0 6.0 3.4 210 chr3R 17823158 intron tinc + chr3R 17823263 intron tinc + chr3R 17823368 intron tinc + chr3R_24_17820001 chr3R_17820001 RAL-307_125b 3008 chr3R 17825867 17825928 chr3R 17825996 17826060 9 130 0.0 7.5 3.8 1.9 193 chr3R 17825867 intron tinc + chr3R 17825964 intron tinc + chr3R 17826060 intron tinc + chr3R_9_17825001 chr3R_17825001 RAL-307_125b 3009 chr3R 17840402 17840421 chr3R 17840529 17840547 13 126 10.5 19.5 15.0 0.8 145 chr3R 17840402 intron tinc + chr3R 17840474 intron tinc + chr3R 17840547 intron tinc + chr3R_13_17840001 chr3R_17840001 RAL-307_125b 3010 chr3R 17898322 17898351 chr3R 17898454 17898483 10 129 7.0 10.0 8.5 1.1 161 chr3R 17898322 intron Rim - chr3R 17898402 intron Rim - chr3R 17898483 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-307_125b 3011 chr3R 17899044 17899066 chr3R 17899172 17899184 10 127 14.5 13.5 14.0 0.7 140 chr3R 17899044 intron Rim - chr3R 17899114 intron Rim - chr3R 17899184 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-307_125b 3012 chr3R 17913074 17913148 chr3R 17913219 17913293 30 145 0.0 7.5 3.8 6.2 219 chr3R 17913074 intron Rim - chr3R 17913184 intron Rim - chr3R 17913293 intron Rim - chr3R_30_17910001 chr3R_17910001 RAL-307_125b 3013 chr3R 17925818 17925865 chr3R 17927335 17927342 hobo 10 1512 10.0 14.5 12.2 0.8 1524 chr3R 17925818 intron cpo + chr3R 17926580 intron cpo + chr3R 17927342 intron cpo + chr3R_10_17925001 chr3R_17925001 RAL-307_125b 3014 chr3R 17976474 17976519 chr3R 17976601 17976646 14 127 7.5 10.0 8.8 1.4 172 chr3R 17976474 intron cpo + chr3R 17976560 intron cpo + chr3R 17976646 intron cpo + chr3R_14_17975001 chr3R_17975001 RAL-307_125b 3015 chr3R 17993687 17993769 chr3R 17993835 17993918 18 145 5.5 5.5 5.5 2.8 231 chr3R 17993687 intron cpo + chr3R 17993802 intron cpo + chr3R 17993918 intron cpo + chr3R_18_17990001 chr3R_17990001 RAL-307_125b 3016 chr3R 18002988 18003035 chr3R 18003134 18003156 12 142 14.5 0.0 7.2 1.5 168 chr3R 18002988 intron cpo + chr3R 18003072 intron cpo + chr3R 18003156 intron cpo + chr3R_12_18000001 chr3R_18000001 RAL-307_125b 3017 chr3R 18030428 18030477 chr3R 18030562 18030611 21 134 5.0 7.5 6.2 2.9 183 chr3R 18030428 intergenic not near genes chr3R 18030520 intergenic not near genes chr3R 18030611 intergenic not near genes chr3R_21_18030001 chr3R_18030001 RAL-307_125b 3018 chr3R 18032734 18032809 chr3R 18040452 18040527 opus 27 7716 0.0 0.0 0.0 27.0 7793 chr3R 18032734 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040527 intergenic not near genes chr3R_27_18035001 chr3R_18035001 RAL-307_125b 3019 chr3R 18041706 18041710 chr3R 18041833 18041837 4 127 4.5 0.5 2.5 1.1 131 chr3R 18041706 intergenic not near genes chr3R 18041772 intergenic not near genes chr3R 18041837 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-307_125b 3020 chr3R 18041712 18041744 chr3R 18041831 18041849 5 121 5.0 0.5 2.8 1.3 137 chr3R 18041712 intergenic not near genes chr3R 18041780 intergenic not near genes chr3R 18041849 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-307_125b 3021 chr3R 18061393 18061451 chr3R 18061535 18061577 25 141 9.0 0.0 4.5 4.5 184 chr3R 18061393 intergenic not near genes chr3R 18061485 intergenic not near genes chr3R 18061577 intergenic not near genes chr3R_25_18060001 chr3R_18060001 RAL-307_125b 3022 chr3R 18061572 18061586 chr3R 18063196 18063210 F-element 8 1623 0.0 8.5 4.2 1.5 1638 chr3R 18061572 intergenic not near genes chr3R 18062391 intergenic not near genes chr3R 18063210 intergenic not near genes chr3R_8_18060001 chr3R_18060001 RAL-307_125b 3023 chr3R 18065661 18065667 chr3R 18065820 18065828 6 160 2.0 14.0 8.0 0.7 167 chr3R 18065661 intergenic not near genes chr3R 18065744 intergenic not near genes chr3R 18065828 intergenic not near genes chr3R_6_18065001 chr3R_18065001 RAL-307_125b 3024 chr3R 18075316 18075367 chr3R 18075476 18075492 10 150 7.5 6.5 7.0 1.2 176 chr3R 18075316 intergenic not near genes chr3R 18075404 intergenic not near genes chr3R 18075492 intergenic not near genes chr3R_10_18075001 chr3R_18075001 RAL-307_125b 3025 chr3R 18098283 18098290 chr3R 18098350 18098417 5 111 6.0 8.5 7.2 0.6 134 chr3R 18098283 intron sr + chr3R 18098350 intron sr + chr3R 18098417 intron sr + chr3R_5_18095001 chr3R_18095001 RAL-307_125b 3026 chr3R 18107123 18107132 chr3R 18107256 18107265 5 133 0.5 12.5 6.5 0.7 142 chr3R 18107123 intron sr + chr3R 18107194 intron sr + chr3R 18107265 intron sr + chr3R_5_18105001 chr3R_18105001 RAL-307_125b 3027 chr3R 18107134 18107136 chr3R 18107246 18107269 4 126 0.5 10.5 5.5 0.6 135 chr3R 18107134 intron sr + chr3R 18107202 intron sr + chr3R 18107269 intron sr + chr3R_4_18105001 chr3R_18105001 RAL-307_125b 3028 chr3R 18117380 18117391 chr3R 18117506 18117517 7 126 20.5 10.5 15.5 0.4 137 chr3R 18117380 intron sr + chr3R 18117448 intron sr + chr3R 18117517 intron sr + chr3R_7_18115001 chr3R_18115001 RAL-307_125b 3029 chr3R 18117396 18117438 chr3R 18117504 18117564 16 120 8.5 10.0 9.2 1.6 168 chr3R 18117396 intron sr + chr3R 18117480 intron sr + chr3R 18117564 intron sr + chr3R_16_18115001 chr3R_18115001 RAL-307_125b 3030 chr3R 18119723 18119753 chr3R 18119834 18119874 11 124 3.5 6.5 5.0 1.8 151 chr3R 18119723 intron sr + chr3R 18119798 intron sr + chr3R 18119874 intron sr + chr3R_11_18115001 chr3R_18115001 RAL-307_125b 3031 chr3R 18122839 18122915 chr3R 18122967 18123042 14 127 6.5 9.0 7.8 1.6 203 chr3R 18122839 intron sr + chr3R 18122940 intron sr + chr3R 18123042 intron sr + chr3R_14_18120001 chr3R_18120001 RAL-307_125b 3032 chr3R 18157554 18157621 chr3R 18157711 18157779 12 157 0.0 5.5 2.8 3.2 225 chr3R 18157554 intergenic CR45103 + chr3R 18157666 intergenic CR45103 + chr3R 18157779 5` UTR CR45103 + chr3R_12_18155001 chr3R_18155001 RAL-307_125b 3033 chr3R 18239616 18239685 chr3R 18239752 18239821 40 134 14.0 13.5 13.8 2.7 205 chr3R 18239616 3` UTR CG7156 - chr3R 18239718 3` UTR CG7156 - chr3R 18239821 3` UTR CG7156 - chr3R_40_18235001 chr3R_18235001 RAL-307_125b 3034 chr3R 18281244 18281312 chr3R 18281395 18281463 34 148 9.0 6.5 7.8 3.9 219 chr3R 18281244 intron eIF-1A + chr3R 18281354 intron eIF-1A + chr3R 18281463 intron eIF-1A + chr3R_34_18280001 chr3R_18280001 RAL-307_125b 3035 chr3R 18291803 18291878 chr3R 18291936 18292011 40 133 9.5 13.0 11.2 3.3 208 chr3R 18291803 intron l(3)05822 - chr3R 18291907 intron l(3)05822 - chr3R 18292011 intron l(3)05822 - chr3R_40_18290001 chr3R_18290001 RAL-307_125b 3036 chr3R 18302944 18302988 chr3R 18303098 18303142 19 151 6.5 0.0 3.2 4.5 198 chr3R 18302944 intergenic CG7126 -,PKD - chr3R 18303043 intergenic CG7126 -,PKD - chr3R 18303142 intergenic PKD -,CG7126 - chr3R_19_18300001 chr3R_18300001 RAL-307_125b 3037 chr3R 18331806 18331815 chr3R 18333361 18333370 hopper2 6 1555 12.0 0.0 6.0 0.9 1564 chr3R 18331806 3` UTR CG15803 - chr3R 18332588 intron CG15803 - chr3R 18333370 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 RAL-307_125b 3038 chr3R 18341981 18341997 chr3R 18342109 18342125 6 127 13.5 7.0 10.2 0.5 144 chr3R 18341981 intron CG15803 - chr3R 18342053 intron CG15803 - chr3R 18342125 intron CG15803 - chr3R_6_18340001 chr3R_18340001 RAL-307_125b 3039 chr3R 18341999 18342042 chr3R 18342091 18342169 14 116 5.5 7.5 6.5 1.9 170 chr3R 18341999 intron CG15803 - chr3R 18342084 intron CG15803 - chr3R 18342169 intron CG15803 - chr3R_14_18340001 chr3R_18340001 RAL-307_125b 3040 chr3R 18352536 18352596 chr3R 18352679 18352739 17 141 10.5 8.5 9.5 1.6 203 chr3R 18352536 intron CG15803 - chr3R 18352638 intron CG15803 - chr3R 18352739 3` UTR CG15803 - chr3R_17_18350001 chr3R_18350001 RAL-307_125b 3041 chr3R 18473177 18473253 chr3R 18473326 18473390 9 137 0.0 7.0 3.5 2.0 213 chr3R 18473177 intron fru - chr3R 18473284 intron fru - chr3R 18473390 intron fru - chr3R_9_18470001 chr3R_18470001 RAL-307_125b 3042 chr3R 18485383 18485462 chr3R 18485534 18485614 17 149 8.0 7.0 7.5 2.0 231 chr3R 18485383 intron fru - chr3R 18485498 intron fru - chr3R 18485614 intron fru - chr3R_17_18485001 chr3R_18485001 RAL-307_125b 3043 chr3R 18498155 18498185 chr3R 18498280 18498309 6 124 4.5 10.0 7.2 0.7 154 chr3R 18498155 intron fru - chr3R 18498232 intron fru - chr3R 18498309 intron fru - chr3R_6_18495001 chr3R_18495001 RAL-307_125b 3044 chr3R 18500716 18500734 chr3R 18500869 18500873 8 164 0.0 12.0 6.0 1.1 157 chr3R 18500716 intron fru - chr3R 18500794 intron fru - chr3R 18500873 intron fru - chr3R_8_18500001 chr3R_18500001 RAL-307_125b 3045 chr3R 18528318 18528389 chr3R 18528455 18528526 37 135 8.5 7.0 7.8 4.2 208 chr3R 18528318 intron fru - chr3R 18528422 intron fru - chr3R 18528526 intron fru - chr3R_37_18525001 chr3R_18525001 RAL-307_125b 3046 chr3R 18562524 18562570 chr3R 18562691 18562739 22 169 16.0 11.0 13.5 1.5 215 chr3R 18562524 intergenic not near genes chr3R 18562632 intergenic not near genes chr3R 18562739 intergenic not near genes chr3R_22_18560001 chr3R_18560001 RAL-307_125b 3047 chr3R 18606453 18606528 chr3R 18610735 18610781 F-element 24 4280 5.5 8.5 7.0 3.0 4328 chr3R 18606453 intron,intron qin +,CG14304 - chr3R 18608617 intron,intron qin +,CG14304 - chr3R 18610781 intron,intron qin +,CG14304 - chr3R_24_18605001 chr3R_18605001 RAL-307_125b 3048 chr3R 18615324 18615406 chr3R 18615463 18615513 34 136 0.0 10.0 5.0 5.7 189 chr3R 18615324 intron,intron qin +,CG14304 - chr3R 18615418 intron,intron qin +,CG14304 - chr3R 18615513 intron,intron qin +,CG14304 - chr3R_34_18615001 chr3R_18615001 RAL-307_125b 3049 chr3R 18617661 18617737 chr3R 18617791 18617867 19 130 6.0 9.0 7.5 2.2 206 chr3R 18617661 intron,intron qin +,CG14304 - chr3R 18617764 intron,intron qin +,CG14304 - chr3R 18617867 intron,intron qin +,CG14304 - chr3R_19_18615001 chr3R_18615001 RAL-307_125b 3050 chr3R 18628745 18628792 chr3R 18628871 18628918 29 125 5.5 3.0 4.2 5.6 173 chr3R 18628745 intron qin + chr3R 18628832 intron qin + chr3R 18628918 intron qin + chr3R_29_18625001 chr3R_18625001 RAL-307_125b 3051 chr3R 18644138 18644179 chr3R 18644263 18644282 7 119 0.5 15.5 8.0 0.8 144 chr3R 18644138 intron qin + chr3R 18644210 intron qin + chr3R 18644282 intron qin + chr3R_7_18640001 chr3R_18640001 RAL-307_125b 3052 chr3R 18695754 18695790 chr3R 18695892 18695928 14 136 8.0 7.0 7.5 1.6 174 chr3R 18695754 3` UTR CG34282 + chr3R 18695841 intergenic CG34282 + chr3R 18695928 intergenic CG34282 + chr3R_14_18695001 chr3R_18695001 RAL-307_125b 3053 chr3R 18697511 18697567 chr3R 18697639 18697695 27 128 13.0 9.0 11.0 2.2 184 chr3R 18697511 intergenic not near genes chr3R 18697603 intergenic not near genes chr3R 18697695 intergenic not near genes chr3R_27_18695001 chr3R_18695001 RAL-307_125b 3054 chr3R 18697568 18697585 chr3R 18697696 18697713 14 128 9.0 25.0 17.0 0.8 145 chr3R 18697568 intergenic not near genes chr3R 18697640 intergenic not near genes chr3R 18697713 intergenic not near genes chr3R_14_18695001 chr3R_18695001 RAL-307_125b 3055 chr3R 18729977 18729986 chr3R 18730103 18730106 4 124 10.5 6.5 8.5 0.4 129 chr3R 18729977 exon Cha + chr3R 18730042 intron Cha + chr3R 18730106 intron Cha + chr3R_4_18730001 chr3R_18730001 RAL-307_125b 3056 chr3R 18729989 18730038 chr3R 18730102 18730146 6 120 3.5 6.0 4.8 1.0 157 chr3R 18729989 exon Cha + chr3R 18730068 intron Cha + chr3R 18730146 exon Cha + chr3R_6_18730001 chr3R_18730001 RAL-307_125b 3057 chr3R 18770248 18770322 chr3R 18770380 18770454 30 131 9.0 8.0 8.5 3.2 206 chr3R 18770248 intron CG7720 - chr3R 18770351 intron CG7720 - chr3R 18770454 intron CG7720 - chr3R_30_18770001 chr3R_18770001 RAL-307_125b 3058 chr3R 18781646 18781723 chr3R 18781772 18781798 24 113 10.0 5.0 7.5 2.8 152 chr3R 18781646 intron CG7720 - chr3R 18781722 intron CG7720 - chr3R 18781798 intron CG7720 - chr3R_24_18780001 chr3R_18780001 RAL-307_125b 3059 chr3R 18791453 18791497 chr3R 18791582 18791606 6 118 7.5 4.0 5.8 0.9 153 chr3R 18791453 intron CG7720 - chr3R 18791530 intron CG7720 - chr3R 18791606 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-307_125b 3060 chr3R 18792758 18792832 chr3R 18792891 18792964 26 132 5.5 0.0 2.8 6.8 206 chr3R 18792758 intron CG7720 - chr3R 18792861 intron CG7720 - chr3R 18792964 intron CG7720 - chr3R_26_18790001 chr3R_18790001 RAL-307_125b 3061 chr3R 18807289 18807311 chr3R 18807415 18807437 7 126 13.5 0.5 7.0 0.9 148 chr3R 18807289 exon CG18208 - chr3R 18807363 intron CG18208 - chr3R 18807437 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-307_125b 3062 chr3R 18812025 18812107 chr3R 18812153 18812171 30 123 9.0 8.0 8.5 3.2 146 chr3R 18812025 intron CG18208 - chr3R 18812098 intron CG18208 - chr3R 18812171 intron CG18208 - chr3R_30_18810001 chr3R_18810001 RAL-307_125b 3063 chr3R 18855497 18855501 chr3R 18855628 18855632 4 131 5.5 1.5 3.5 0.9 135 chr3R 18855497 intergenic not near genes chr3R 18855564 intergenic not near genes chr3R 18855632 intergenic not near genes chr3R_4_18855001 chr3R_18855001 RAL-307_125b 3064 chr3R 19012994 19013048 chr3R 19013108 19013182 23 131 7.5 6.0 6.8 2.9 188 chr3R 19012994 intron gukh + chr3R 19013088 intron gukh + chr3R 19013182 exon gukh + chr3R_23_19010001 chr3R_19010001 RAL-307_125b 3065 chr3R 19033892 19033959 chr3R 19034004 19034025 15 112 5.0 3.5 4.2 2.9 133 chr3R 19033892 intron CG6026 + chr3R 19033958 intron CG6026 + chr3R 19034025 intron CG6026 + chr3R_15_19030001 chr3R_19030001 RAL-307_125b 3066 chr3R 19128832 19128841 chr3R 19129006 19129025 7 182 0.0 6.0 3.0 1.8 193 chr3R 19128832 intron CG6040 + chr3R 19128928 intron CG6040 + chr3R 19129025 intron CG6040 + chr3R_7_19125001 chr3R_19125001 RAL-307_125b 3067 chr3R 19340351 19340422 chr3R 19340478 19340549 21 125 12.0 8.0 10.0 1.9 198 chr3R 19340351 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340549 intergenic not near genes chr3R_21_19340001 chr3R_19340001 RAL-307_125b 3068 chr3R 19344626 19344699 chr3R 19344811 19344884 37 185 7.5 3.5 5.5 5.7 258 chr3R 19344626 intergenic not near genes chr3R 19344755 intergenic not near genes chr3R 19344884 intergenic not near genes chr3R_37_19340001 chr3R_19340001 RAL-307_125b 3069 chr3R 19438323 19438397 chr3R 19438456 19438530 38 130 12.0 8.0 10.0 3.5 207 chr3R 19438323 intron CG31221 + chr3R 19438426 intron CG31221 + chr3R 19438530 intron CG31221 + chr3R_38_19435001 chr3R_19435001 RAL-307_125b 3070 chr3R 19570261 19570340 chr3R 19570387 19570466 35 122 11.5 17.5 14.5 2.3 205 chr3R 19570261 intron Dys + chr3R 19570364 intron Dys + chr3R 19570466 intron Dys + chr3R_35_19570001 chr3R_19570001 RAL-307_125b 3071 chr3R 19600256 19600258 chr3R 19600385 19600387 4 129 8.0 20.5 14.2 0.3 131 chr3R 19600256 intergenic CG7333 + chr3R 19600322 intergenic CG7333 + chr3R 19600387 intergenic CG7333 + chr3R_4_19600001 chr3R_19600001 RAL-307_125b 3072 chr3R 19602723 19602784 chr3R 19602851 19602912 19 127 11.5 16.0 13.8 1.3 189 chr3R 19602723 intergenic CG7333 + chr3R 19602818 intergenic CG7333 + chr3R 19602912 intergenic CG7333 +,CG7342 + chr3R_19_19600001 chr3R_19600001 RAL-307_125b 3073 chr3R 19633265 19633319 chr3R 19633397 19633451 17 132 2.5 14.0 8.2 1.8 186 chr3R 19633265 intergenic subdued - chr3R 19633358 intergenic subdued - chr3R 19633451 3` UTR subdued - chr3R_17_19630001 chr3R_19630001 RAL-307_125b 3074 chr3R 19718820 19718850 chr3R 19718995 19719025 11 175 4.5 10.0 7.2 1.3 205 chr3R 19718820 intergenic not near genes chr3R 19718922 intergenic not near genes chr3R 19719025 intergenic not near genes chr3R_11_19715001 chr3R_19715001 RAL-307_125b 3075 chr3R 19718857 19718875 chr3R 19719015 19719050 14 174 3.0 15.0 9.0 1.4 193 chr3R 19718857 intergenic not near genes chr3R 19718954 intergenic not near genes chr3R 19719050 intergenic not near genes chr3R_14_19715001 chr3R_19715001 RAL-307_125b 3076 chr3R 19744202 19744211 chr3R 19749496 19749505 Rt1a 5 5294 16.5 15.0 15.8 0.3 5303 chr3R 19744202 intron,intron GluClalpha +,CR43488 - chr3R 19746854 intron GluClalpha + chr3R 19749505 intron GluClalpha + chr3R_5_19745001 chr3R_19745001 RAL-307_125b 3077 chr3R 19783135 19783212 chr3R 19783273 19783350 37 137 6.0 8.5 7.2 4.5 215 chr3R 19783135 3` UTR CG11407 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783350 intergenic CG11453 +,CG11407 + chr3R_37_19780001 chr3R_19780001 RAL-307_125b 3078 chr3R 19793857 19793888 chr3R 19794000 19794031 18 142 25.0 11.5 18.2 0.9 174 chr3R 19793857 intergenic bnl - chr3R 19793944 intergenic bnl - chr3R 19794031 intergenic bnl - chr3R_18_19790001 chr3R_19790001 RAL-307_125b 3079 chr3R 19793890 19793927 chr3R 19793998 19794019 25 139 11.0 11.0 11.0 2.1 129 chr3R 19793890 intergenic bnl - chr3R 19793954 intergenic bnl - chr3R 19794019 intergenic bnl - chr3R_25_19790001 chr3R_19790001 RAL-307_125b 3080 chr3R 19800637 19800663 chr3R 19800764 19800788 7 121 12.5 6.0 9.2 0.7 151 chr3R 19800637 intron bnl - chr3R 19800712 intron bnl - chr3R 19800788 intron bnl - chr3R_7_19800001 chr3R_19800001 RAL-307_125b 3081 chr3R 19800666 19800682 chr3R 19800762 19800809 8 111 9.0 6.5 7.8 0.9 143 chr3R 19800666 intron bnl - chr3R 19800738 intron bnl - chr3R 19800809 intron bnl - chr3R_8_19800001 chr3R_19800001 RAL-307_125b 3082 chr3R 19800683 19800705 chr3R 19800761 19800808 10 111 6.0 6.5 6.2 1.4 125 chr3R 19800683 intron bnl - chr3R 19800746 intron bnl - chr3R 19800808 intron bnl - chr3R_10_19800001 chr3R_19800001 RAL-307_125b 3083 chr3R 19827477 19827558 chr3R 19827613 19827694 25 133 6.5 4.0 5.2 4.0 217 chr3R 19827477 intron bnl - chr3R 19827586 intron bnl - chr3R 19827694 exon bnl - chr3R_25_19825001 chr3R_19825001 RAL-307_125b 3084 chr3R 19908222 19908302 chr3R 19908356 19908436 19 131 0.0 6.0 3.0 4.8 214 chr3R 19908222 intron RhoGAP92B + chr3R 19908329 intron RhoGAP92B + chr3R 19908436 exon,3` UTR RhoGAP92B +,CR45048 - chr3R_19_19905001 chr3R_19905001 RAL-307_125b 3085 chr3R 19945923 19945998 chr3R 19946075 19946140 31 149 3.5 7.5 5.5 4.8 217 chr3R 19945923 intron Hs6st - chr3R 19946032 intron Hs6st - chr3R 19946140 intron Hs6st - chr3R_31_19945001 chr3R_19945001 RAL-307_125b 3086 chr3R 19949988 19950065 chr3R 19950109 19950167 42 124 13.5 12.5 13.0 3.0 179 chr3R 19949988 intron Hs6st - chr3R 19950078 intron Hs6st - chr3R 19950167 intron Hs6st - chr3R_42_19950001 chr3R_19950001 RAL-307_125b 3087 chr3R 19953905 19953976 chr3R 19954032 19954070 15 115 5.5 6.0 5.8 2.2 165 chr3R 19953905 intron Hs6st - chr3R 19953988 intron Hs6st - chr3R 19954070 intron Hs6st - chr3R_15_19950001 chr3R_19950001 RAL-307_125b 3088 chr3R 19981433 19981442 chr3R 19981563 19981572 5 130 6.5 15.5 11.0 0.4 139 chr3R 19981433 intron Hs6st - chr3R 19981502 intron Hs6st - chr3R 19981572 intron Hs6st - chr3R_5_19980001 chr3R_19980001 RAL-307_125b 3089 chr3R 20008785 20008817 chr3R 20008916 20008948 16 131 21.0 14.5 17.8 0.9 163 chr3R 20008785 intergenic MED25 +,Hs6st - chr3R 20008866 intergenic MED25 +,Hs6st - chr3R 20008948 5` UTR MED25 + chr3R_16_20005001 chr3R_20005001 RAL-307_125b 3090 chr3R 20008822 20008846 chr3R 20008903 20008940 9 119 13.0 14.0 13.5 0.6 118 chr3R 20008822 intergenic MED25 +,Hs6st - chr3R 20008881 intergenic MED25 +,Hs6st - chr3R 20008940 intergenic MED25 +,Hs6st - chr3R_9_20005001 chr3R_20005001 RAL-307_125b 3091 chr3R 20045655 20045728 chr3R 20045791 20045863 37 134 8.0 6.0 7.0 4.6 208 chr3R 20045655 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045759 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045863 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R_37_20045001 chr3R_20045001 RAL-307_125b 3092 chr3R 20109489 20109571 chr3R 20114743 20114795 copia 36 5253 7.0 12.0 9.5 3.4 5306 chr3R 20109489 intergenic not near genes chr3R 20112142 intergenic not near genes chr3R 20114795 intergenic CG10887 + chr3R_36_20110001 chr3R_20110001 RAL-307_125b 3093 chr3R 20156651 20156720 chr3R 20165871 20165908 roo 24 9218 13.0 14.0 13.5 1.7 9257 chr3R 20156651 intergenic not near genes chr3R 20161280 intergenic not near genes chr3R 20165908 intergenic not near genes chr3R_24_20160001 chr3R_20160001 RAL-307_125b 3094 chr3R 20180658 20180721 chr3R 20180793 20180857 17 135 6.5 3.5 5.0 2.8 199 chr3R 20180658 intergenic not near genes chr3R 20180758 intergenic not near genes chr3R 20180857 intergenic not near genes chr3R_17_20180001 chr3R_20180001 RAL-307_125b 3095 chr3R 20195639 20195709 chr3R 20195766 20195835 27 126 10.5 13.5 12.0 2.1 196 chr3R 20195639 intergenic not near genes chr3R 20195737 intergenic not near genes chr3R 20195835 intergenic not near genes chr3R_27_20195001 chr3R_20195001 RAL-307_125b 3096 chr3R 20205515 20205595 chr3R 20205687 20205767 33 171 7.0 12.5 9.8 3.1 252 chr3R 20205515 intron Nlg4 + chr3R 20205641 intron Nlg4 + chr3R 20205767 intron Nlg4 + chr3R_33_20205001 chr3R_20205001 RAL-307_125b 3097 chr3R 20266474 20266531 chr3R 20272995 20273052 Burdock 34 6519 12.0 14.0 13.0 2.4 6578 chr3R 20266474 intron cic + chr3R 20269763 intron cic + chr3R 20273052 intron cic + chr3R_34_20265001 chr3R_20265001 RAL-307_125b 3098 chr3R 20266532 20266543 chr3R 20272993 20273047 Burdock 8 6506 10.0 14.0 12.0 0.6 6515 chr3R 20266532 intron cic + chr3R 20269790 intron cic + chr3R 20273047 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-307_125b 3099 chr3R 20282228 20282299 chr3R 20282354 20282425 34 124 1.0 8.0 4.5 6.2 197 chr3R 20282228 intron cic + chr3R 20282326 intron cic + chr3R 20282425 intron cic + chr3R_34_20280001 chr3R_20280001 RAL-307_125b 3100 chr3R 20312808 20312881 chr3R 20312943 20313017 35 135 15.0 11.5 13.2 2.5 209 chr3R 20312808 intron CG42668 + chr3R 20312912 intron CG42668 + chr3R 20313017 intron CG42668 + chr3R_35_20310001 chr3R_20310001 RAL-307_125b 3101 chr3R 20330955 20331023 chr3R 20331491 20331559 roo 38 536 11.0 14.5 12.8 2.8 604 chr3R 20330955 intergenic Sirt2 + chr3R 20331257 intergenic Sirt2 + chr3R 20331559 intergenic not near genes chr3R_38_20330001 chr3R_20330001 RAL-307_125b 3102 chr3R 20365740 20365776 chr3R 20365843 20365907 24 123 3.0 6.5 4.8 4.1 167 chr3R 20365740 intergenic not near genes chr3R 20365824 intergenic not near genes chr3R 20365907 intergenic not near genes chr3R_24_20365001 chr3R_20365001 RAL-307_125b 3103 chr3R 20389649 20389719 chr3R 20389781 20389851 14 131 10.5 9.5 10.0 1.3 202 chr3R 20389649 intron Gfrl - chr3R 20389750 intron Gfrl - chr3R 20389851 intron Gfrl - chr3R_14_20385001 chr3R_20385001 RAL-307_125b 3104 chr3R 20411356 20411418 chr3R 20411670 20411732 28 314 8.5 9.5 9.0 2.8 376 chr3R 20411356 intron Gfrl - chr3R 20411544 intron Gfrl - chr3R 20411732 intron Gfrl - chr3R_28_20410001 chr3R_20410001 RAL-307_125b 3105 chr3R 20433054 20433116 chr3R 20433194 20433256 22 139 10.0 8.0 9.0 2.2 202 chr3R 20433054 intron Gfrl - chr3R 20433155 intron Gfrl - chr3R 20433256 intron Gfrl - chr3R_22_20430001 chr3R_20430001 RAL-307_125b 3106 chr3R 20443106 20443178 chr3R 20443273 20443335 23 167 4.0 6.0 5.0 3.8 229 chr3R 20443106 intron Gfrl - chr3R 20443220 intron Gfrl - chr3R 20443335 intron Gfrl - chr3R_23_20440001 chr3R_20440001 RAL-307_125b 3107 chr3R 20450067 20450143 chr3R 20450197 20450278 16 130 3.0 0.0 1.5 6.4 211 chr3R 20450067 intron Gfrl - chr3R 20450172 intron Gfrl - chr3R 20450278 intron Gfrl - chr3R_16_20450001 chr3R_20450001 RAL-307_125b 3108 chr3R 20469235 20469460 chr3R 20469382 20469597 28 143 3.0 3.5 3.2 6.7 362 chr3R 20469235 intron Gfrl - chr3R 20469416 intron Gfrl - chr3R 20469597 intron Gfrl - chr3R_28_20465001 chr3R_20465001 RAL-307_125b 3109 chr3R 20498468 20498547 chr3R 20498611 20498690 18 142 9.5 0.0 4.8 3.1 222 chr3R 20498468 intergenic not near genes chr3R 20498579 intergenic not near genes chr3R 20498690 intergenic not near genes chr3R_18_20495001 chr3R_20495001 RAL-307_125b 3110 chr3R 20506527 20506609 chr3R 20507391 20507442 BS 22 852 0.5 10.5 5.5 3.4 915 chr3R 20506527 intergenic Or92a + chr3R 20506984 intergenic CG4288 - chr3R 20507442 3` UTR CG4288 - chr3R_22_20505001 chr3R_20505001 RAL-307_125b 3111 chr3R 20512964 20513033 chr3R 20515709 20515766 opus 17 2751 7.5 11.5 9.5 1.6 2802 chr3R 20512964 intergenic CG4288 - chr3R 20514365 intergenic not near genes chr3R 20515766 intergenic not near genes chr3R_17_20510001 chr3R_20510001 RAL-307_125b 3112 chr3R 20516490 20516571 chr3R 20516896 20516978 43 402 9.0 10.0 9.5 4.1 488 chr3R 20516490 intergenic not near genes chr3R 20516734 intergenic not near genes chr3R 20516978 intergenic not near genes chr3R_43_20515001 chr3R_20515001 RAL-307_125b 3113 chr3R 20657291 20657342 chr3R 20657486 20657537 13 192 9.0 6.0 7.5 1.5 246 chr3R 20657291 intron Nep4 - chr3R 20657414 intron Nep4 - chr3R 20657537 intron Nep4 - chr3R_13_20655001 chr3R_20655001 RAL-307_125b 3114 chr3R 20667401 20667443 chr3R 20667860 20667892 20 455 3.5 2.5 3.0 5.0 491 chr3R 20667401 intergenic not near genes chr3R 20667646 intergenic not near genes chr3R 20667892 intergenic not near genes chr3R_20_20665001 chr3R_20665001 RAL-307_125b 3115 chr3R 20675956 20676026 chr3R 20676090 20676160 36 130 9.5 15.5 12.5 2.7 204 chr3R 20675956 intergenic CG4000 - chr3R 20676058 intergenic CG4000 - chr3R 20676160 intergenic CG4000 - chr3R_36_20675001 chr3R_20675001 RAL-307_125b 3116 chr3R 20703439 20703507 chr3R 20703883 20703951 33 440 14.5 10.0 12.2 2.5 512 chr3R 20703439 intron Oamb - chr3R 20703695 intron Oamb - chr3R 20703951 intron Oamb - chr3R_33_20700001 chr3R_20700001 RAL-307_125b 3117 chr3R 20707696 20707774 chr3R 20707961 20708039 46 263 10.5 11.5 11.0 3.8 343 chr3R 20707696 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20708039 intron Oamb - chr3R_46_20705001 chr3R_20705001 RAL-307_125b 3118 chr3R 20716764 20716842 chr3R 20717151 20717196 34 378 11.5 10.5 11.0 2.8 432 chr3R 20716764 intergenic not near genes chr3R 20716980 intergenic not near genes chr3R 20717196 intergenic not near genes chr3R_34_20715001 chr3R_20715001 RAL-307_125b 3119 chr3R 20730894 20730903 chr3R 20731035 20731044 5 141 19.5 0.0 9.8 0.5 150 chr3R 20730894 intergenic not near genes chr3R 20730969 intergenic not near genes chr3R 20731044 intergenic not near genes chr3R_5_20730001 chr3R_20730001 RAL-307_125b 3120 chr3R 20730904 20730955 chr3R 20731034 20731113 17 138 8.0 0.0 4.0 3.4 209 chr3R 20730904 intergenic not near genes chr3R 20731008 intergenic not near genes chr3R 20731113 intergenic not near genes chr3R_17_20730001 chr3R_20730001 RAL-307_125b 3121 chr3R 20733718 20734014 chr3R 20733860 20734138 28 138 0.0 8.0 4.0 5.6 420 chr3R 20733718 intergenic not near genes chr3R 20733928 intergenic not near genes chr3R 20734138 intergenic not near genes chr3R_28_20730001 chr3R_20730001 RAL-307_125b 3122 chr3R 20764374 20764432 chr3R 20764513 20764563 16 134 11.5 8.5 10.0 1.5 189 chr3R 20764374 intron Syp + chr3R 20764468 intron Syp + chr3R 20764563 intron Syp + chr3R_16_20760001 chr3R_20760001 RAL-307_125b 3123 chr3R 20771704 20771721 chr3R 20771805 20771852 12 122 0.0 15.0 7.5 1.4 148 chr3R 20771704 intron,intron Syp +,Takl1 - chr3R 20771778 intron,intron Syp +,Takl1 - chr3R 20771852 intron,exon Syp +,Takl1 - chr3R_12_20770001 chr3R_20770001 RAL-307_125b 3124 chr3R 20787389 20787455 chr3R 20787529 20787596 29 139 6.5 10.5 8.5 3.1 207 chr3R 20787389 intron Syp + chr3R 20787492 intron Syp + chr3R 20787596 intron Syp + chr3R_29_20785001 chr3R_20785001 RAL-307_125b 3125 chr3R 20854452 20854508 chr3R 20859285 20859308 Doc 27 4832 5.0 11.0 8.0 3.0 4856 chr3R 20854452 intron Ir93a - chr3R 20856880 intron Ir93a - chr3R 20859308 exon Ir93a - chr3R_27_20855001 chr3R_20855001 RAL-307_125b 3126 chr3R 20870207 20870278 chr3R 20870342 20870413 28 134 4.0 9.0 6.5 3.7 206 chr3R 20870207 intergenic not near genes chr3R 20870310 intergenic not near genes chr3R 20870413 intergenic not near genes chr3R_28_20870001 chr3R_20870001 RAL-307_125b 3127 chr3R 20936037 20936104 chr3R 20936164 20936231 22 126 9.0 11.0 10.0 2.0 194 chr3R 20936037 intron CG31191 - chr3R 20936134 intron CG31191 - chr3R 20936231 intron CG31191 - chr3R_22_20935001 chr3R_20935001 RAL-307_125b 3128 chr3R 20968483 20968557 chr3R 20968636 20968655 39 151 11.5 8.0 9.8 3.6 172 chr3R 20968483 intron Atpalpha + chr3R 20968569 intron Atpalpha + chr3R 20968655 intron Atpalpha + chr3R_39_20965001 chr3R_20965001 RAL-307_125b 3129 chr3R 20990683 20990701 chr3R 20990815 20990832 10 131 17.5 10.0 13.8 0.7 149 chr3R 20990683 intron Calx + chr3R 20990758 intron Calx + chr3R 20990832 intron Calx + chr3R_10_20990001 chr3R_20990001 RAL-307_125b 3130 chr3R 20990702 20990752 chr3R 20990806 20990884 27 131 10.0 7.0 8.5 2.8 182 chr3R 20990702 intron Calx + chr3R 20990793 intron Calx + chr3R 20990884 intron Calx + chr3R_27_20990001 chr3R_20990001 RAL-307_125b 3131 chr3R 21020353 21020420 chr3R 21020479 21020546 41 125 12.0 9.5 10.8 3.5 193 chr3R 21020353 3` UTR Rlip + chr3R 21020450 3` UTR Rlip + chr3R 21020546 3` UTR Rlip + chr3R_41_21020001 chr3R_21020001 RAL-307_125b 3132 chr3R 21074809 21074819 chr3R 21075080 21075090 9 271 13.0 17.5 15.2 0.6 281 chr3R 21074809 intron dmrt93B + chr3R 21074950 intron dmrt93B + chr3R 21075090 intron dmrt93B + chr3R_9_21070001 chr3R_21070001 RAL-307_125b 3133 chr3R 21107988 21108066 chr3R 21108299 21108377 15 310 4.0 6.5 5.2 2.4 389 chr3R 21107988 intergenic Sec15 -,rtet + chr3R 21108182 intergenic Sec15 -,rtet + chr3R 21108377 intergenic rtet +,Sec15 - chr3R_15_21105001 chr3R_21105001 RAL-307_125b 3134 chr3R 21141631 21141670 chr3R 21150162 21150184 Tirant 5 8526 14.5 9.5 12.0 0.4 8553 chr3R 21141631 intron SNF4Agamma + chr3R 21145908 intron SNF4Agamma + chr3R 21150184 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 RAL-307_125b 3135 chr3R 21141676 21141706 chr3R 21150157 21150236 Tirant 11 8514 7.0 7.0 7.0 1.4 8560 chr3R 21141676 intron SNF4Agamma + chr3R 21145956 intron SNF4Agamma + chr3R 21150236 intron SNF4Agamma + chr3R_11_21145001 chr3R_21145001 RAL-307_125b 3136 chr3R 21154521 21154587 chr3R 21154786 21154852 24 262 5.0 4.5 4.8 4.1 331 chr3R 21154521 intron SNF4Agamma + chr3R 21154686 intron SNF4Agamma + chr3R 21154852 intron SNF4Agamma + chr3R_24_21150001 chr3R_21150001 RAL-307_125b 3137 chr3R 21165040 21165116 chr3R 21165173 21165239 28 130 6.5 8.5 7.5 3.3 199 chr3R 21165040 intron,exon SNF4Agamma +,CG5810 + chr3R 21165140 intron,3` UTR SNF4Agamma +,CG5810 + chr3R 21165239 intron,3` UTR SNF4Agamma +,Snmp1 - chr3R_28_21165001 chr3R_21165001 RAL-307_125b 3138 chr3R 21182747 21182829 chr3R 21183408 21183490 32 657 13.0 5.0 9.0 3.2 743 chr3R 21182747 intron SNF4Agamma + chr3R 21183118 intron SNF4Agamma + chr3R 21183490 intron SNF4Agamma + chr3R_32_21180001 chr3R_21180001 RAL-307_125b 3139 chr3R 21188038 21188085 chr3R 21188177 21188244 6 154 1.0 0.0 0.5 4.0 206 chr3R 21188038 intron SNF4Agamma + chr3R 21188141 intron SNF4Agamma + chr3R 21188244 intron SNF4Agamma + chr3R_6_21185001 chr3R_21185001 RAL-307_125b 3140 chr3R 21214694 21214766 chr3R 21214916 21214979 18 220 14.0 11.5 12.8 1.3 285 chr3R 21214694 intergenic CG5862 + chr3R 21214836 intergenic CG5862 + chr3R 21214979 intergenic CG5862 + chr3R_18_21210001 chr3R_21210001 RAL-307_125b 3141 chr3R 21239793 21239955 chr3R 21239934 21240080 17 132 0.5 0.5 0.5 11.3 287 chr3R 21239793 intergenic not near genes chr3R 21239936 intergenic not near genes chr3R 21240080 intergenic not near genes chr3R_17_21235001 chr3R_21235001 RAL-307_125b 3142 chr3R 21274329 21274381 chr3R 21274473 21274525 23 144 19.0 9.5 14.2 1.5 196 chr3R 21274329 3` UTR CG3301 - chr3R 21274427 3` UTR CG3301 - chr3R 21274525 3` UTR CG3301 - chr3R_23_21270001 chr3R_21270001 RAL-307_125b 3143 chr3R 21274383 21274617 chr3R 21274471 21274749 14 135 19.5 9.0 14.2 0.9 366 chr3R 21274383 3` UTR CG3301 - chr3R 21274566 3` UTR CG3301 - chr3R 21274749 intron CG3301 - chr3R_14_21270001 chr3R_21270001 RAL-307_125b 3144 chr3R 21383224 21383301 chr3R 21383359 21383431 17 130 0.5 0.5 0.5 11.3 207 chr3R 21383224 intergenic not near genes chr3R 21383328 intergenic not near genes chr3R 21383431 intergenic not near genes chr3R_17_21380001 chr3R_21380001 RAL-307_125b 3145 chr3R 21385897 21385963 chr3R 21386009 21386074 18 120 8.0 11.5 9.8 1.7 177 chr3R 21385897 intergenic not near genes chr3R 21385986 intergenic not near genes chr3R 21386074 intergenic not near genes chr3R_18_21385001 chr3R_21385001 RAL-307_125b 3146 chr3R 21460990 21461008 chr3R 21461130 21461148 8 140 13.0 0.5 6.8 1.0 158 chr3R 21460990 intergenic not near genes chr3R 21461069 intergenic not near genes chr3R 21461148 intergenic not near genes chr3R_8_21460001 chr3R_21460001 RAL-307_125b 3147 chr3R 21464353 21464412 chr3R 21464489 21464546 15 135 4.0 2.0 3.0 3.8 193 chr3R 21464353 intergenic not near genes chr3R 21464450 intergenic not near genes chr3R 21464546 intergenic not near genes chr3R_15_21460001 chr3R_21460001 RAL-307_125b 3148 chr3R 21471983 21472010 chr3R 21472103 21472141 13 127 18.0 13.5 15.8 0.8 158 chr3R 21471983 intergenic not near genes chr3R 21472062 intergenic not near genes chr3R 21472141 intergenic not near genes chr3R_13_21470001 chr3R_21470001 RAL-307_125b 3149 chr3R 21472013 21472032 chr3R 21472094 21472135 14 122 10.0 13.5 11.8 1.1 122 chr3R 21472013 intergenic not near genes chr3R 21472074 intergenic not near genes chr3R 21472135 intergenic not near genes chr3R_14_21470001 chr3R_21470001 RAL-307_125b 3150 chr3R 21517985 21518269 chr3R 21518154 21518403 22 139 0.0 0.0 0.0 22.0 418 chr3R 21517985 intergenic not near genes chr3R 21518194 intergenic not near genes chr3R 21518403 intergenic not near genes chr3R_22_21515001 chr3R_21515001 RAL-307_125b 3151 chr3R 21519938 21520121 chr3R 21520089 21520258 42 154 0.0 0.5 0.2 35.0 320 chr3R 21519938 intergenic not near genes chr3R 21520098 intergenic not near genes chr3R 21520258 intergenic not near genes chr3R_42_21520001 chr3R_21520001 RAL-307_125b 3152 chr3R 21586376 21586385 chr3R 21586510 21586519 7 132 31.0 9.0 20.0 0.3 143 chr3R 21586376 intron InR - chr3R 21586448 intron InR - chr3R 21586519 intron InR - chr3R_7_21585001 chr3R_21585001 RAL-307_125b 3153 chr3R 21586387 21586430 chr3R 21586505 21586564 22 130 15.0 7.0 11.0 1.8 177 chr3R 21586387 intron InR - chr3R 21586476 intron InR - chr3R 21586564 intron InR - chr3R_22_21585001 chr3R_21585001 RAL-307_125b 3154 chr3R 21725652 21725682 chr3R 21725812 21725868 6 182 0.0 9.5 4.8 1.0 216 chr3R 21725652 intergenic not near genes chr3R 21725760 intergenic not near genes chr3R 21725868 intergenic not near genes chr3R_6_21725001 chr3R_21725001 RAL-307_125b 3155 chr3R 21733926 21733955 chr3R 21734079 21734108 5 153 3.0 3.5 3.2 1.2 182 chr3R 21733926 intergenic not near genes chr3R 21734017 intergenic not near genes chr3R 21734108 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-307_125b 3156 chr3R 21761083 21761105 chr3R 21768525 21768547 mdg1 4 7440 13.5 9.0 11.2 0.3 7464 chr3R 21761083 exon CG42335 + chr3R 21764815 intron CG42335 + chr3R 21768547 exon CG42335 + chr3R_4_21760001 chr3R_21760001 RAL-307_125b 3157 chr3R 21761110 21761125 chr3R 21768522 21768567 mdg1 4 7429 10.0 8.5 9.2 0.4 7457 chr3R 21761110 exon CG42335 + chr3R 21764838 intron CG42335 + chr3R 21768567 exon CG42335 + chr3R_4_21760001 chr3R_21760001 RAL-307_125b 3158 chr3R 21761133 21761155 chr3R 21768511 21768560 mdg1 6 7419 7.0 6.0 6.5 0.8 7427 chr3R 21761133 exon CG42335 + chr3R 21764846 intron CG42335 + chr3R 21768560 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-307_125b 3159 chr3R 21897548 21897587 chr3R 21897834 21897885 16 299 5.5 7.0 6.2 2.2 337 chr3R 21897548 intron CG6678 + chr3R 21897716 intron CG6678 + chr3R 21897885 intron CG6678 + chr3R_16_21895001 chr3R_21895001 RAL-307_125b 3160 chr3R 21903495 21903631 chr3R 21903625 21903778 7 140 0.0 0.0 0.0 7.0 283 chr3R 21903495 intron CG6678 + chr3R 21903636 intron CG6678 + chr3R 21903778 intron CG6678 + chr3R_7_21900001 chr3R_21900001 RAL-307_125b 3161 chr3R 8339246 8339247 chr3R 21907535 21907535 4 13568288 46.0 30.0 38.0 0.1 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-307_125b 3162 chr3R 21907535 21907535 chr3R 28831801 28831802 15 6924266 31.0 29.0 30.0 0.5 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-307_125b 3163 chr3R 21907536 21907536 chr3R 28831801 28831802 19 6924266 30.5 29.0 29.8 0.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_19_25365001 chr3R_25365001 RAL-307_125b 3164 chr3R 21937179 21937233 chr3R 21937306 21937360 23 125 9.5 16.0 12.8 1.7 181 chr3R 21937179 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937360 intergenic not near genes chr3R_23_21935001 chr3R_21935001 RAL-307_125b 3165 chr3R 21989069 21989120 chr3R 21989243 21989294 6 174 10.0 0.0 5.0 1.0 225 chr3R 21989069 intron Eip93F + chr3R 21989182 intron Eip93F + chr3R 21989294 intron Eip93F + chr3R_6_21985001 chr3R_21985001 RAL-307_125b 3166 chr3R 22013046 22013063 chr3R 22013167 22013195 6 130 9.0 16.5 12.8 0.4 149 chr3R 22013046 intergenic not near genes chr3R 22013120 intergenic not near genes chr3R 22013195 intergenic not near genes chr3R_6_22010001 chr3R_22010001 RAL-307_125b 3167 chr3R 22046824 22046851 chr3R 22046969 22046984 8 143 25.0 0.0 12.5 0.6 160 chr3R 22046824 intron how + chr3R 22046904 intron how + chr3R 22046984 intron how + chr3R_8_22045001 chr3R_22045001 RAL-307_125b 3168 chr3R 22055059 22055117 chr3R 22055203 22055242 28 141 5.5 7.0 6.2 3.9 183 chr3R 22055059 intron how + chr3R 22055150 intron how + chr3R 22055242 intron how + chr3R_28_22055001 chr3R_22055001 RAL-307_125b 3169 chr3R 22087515 22087584 chr3R 22087652 22087723 21 134 5.0 0.5 2.8 5.5 208 chr3R 22087515 intron,exon CG5778 -,CG5791 + chr3R 22087619 intron,exon CG5778 -,CG5791 + chr3R 22087723 intron,3` UTR CG5778 -,CG5791 + chr3R_21_22085001 chr3R_22085001 RAL-307_125b 3170 chr3R 22191477 22191527 chr3R 22191594 22191656 26 124 8.0 11.5 9.8 2.4 179 chr3R 22191477 intron SKIP + chr3R 22191566 intron SKIP + chr3R 22191656 intron SKIP + chr3R_26_22190001 chr3R_22190001 RAL-307_125b 3171 chr3R 22234634 22234703 chr3R 22236003 22236072 pogo 5 1369 24.0 40.5 32.2 0.2 1438 chr3R 22234634 intron SKIP + chr3R 22235353 intron SKIP + chr3R 22236072 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-307_125b 3172 chr3R 22239461 22239521 chr3R 22248555 22248619 roo 21 9098 8.0 3.5 5.8 3.1 9158 chr3R 22239461 intron SKIP + chr3R 22244040 intron SKIP + chr3R 22248619 intron SKIP + chr3R_21_22240001 chr3R_22240001 RAL-307_125b 3173 chr3R 22309960 22309974 chr3R 22310093 22310104 5 131 20.5 3.0 11.8 0.4 144 chr3R 22309960 3` UTR CG34377 - chr3R 22310032 3` UTR CG34377 - chr3R 22310104 3` UTR CG34377 - chr3R_5_22310001 chr3R_22310001 RAL-307_125b 3174 chr3R 22428533 22428609 chr3R 22428659 22428707 28 119 17.0 11.5 14.2 1.8 174 chr3R 22428533 intron CG13847 - chr3R 22428620 intron CG13847 - chr3R 22428707 intron CG13847 - chr3R_28_22425001 chr3R_22425001 RAL-307_125b 3175 chr3R 22433054 22433063 chr3R 22433204 22433213 7 150 27.5 16.5 22.0 0.3 159 chr3R 22433054 intron CG13847 - chr3R 22433134 intron CG13847 - chr3R 22433213 intron CG13847 - chr3R_7_22430001 chr3R_22430001 RAL-307_125b 3176 chr3R 22433064 22433089 chr3R 22433194 22433239 9 141 19.5 13.5 16.5 0.5 175 chr3R 22433064 intron CG13847 - chr3R 22433152 intron CG13847 - chr3R 22433239 intron CG13847 - chr3R_9_22430001 chr3R_22430001 RAL-307_125b 3177 chr3R 22437757 22437817 chr3R 22437880 22437957 20 138 1.5 5.5 3.5 4.4 200 chr3R 22437757 intergenic not near genes chr3R 22437857 intergenic not near genes chr3R 22437957 intergenic not near genes chr3R_20_22435001 chr3R_22435001 RAL-307_125b 3178 chr3R 22450507 22450568 chr3R 22453197 22453258 NOF 19 2684 9.5 10.5 10.0 1.7 2751 chr3R 22450507 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453258 intron CG34376 + chr3R_19_22450001 chr3R_22450001 RAL-307_125b 3179 chr3R 22503844 22503892 chr3R 22503974 22504017 14 129 0.0 3.0 1.5 5.6 173 chr3R 22503844 intron Octbeta1R + chr3R 22503930 intron Octbeta1R + chr3R 22504017 intron Octbeta1R + chr3R_14_22500001 chr3R_22500001 RAL-307_125b 3180 chr3R 22520719 22520790 chr3R 22520856 22520927 25 135 6.5 14.5 10.5 2.2 208 chr3R 22520719 intron CG5346 - chr3R 22520823 intron CG5346 - chr3R 22520927 intron CG5346 - chr3R_25_22520001 chr3R_22520001 RAL-307_125b 3181 chr3R 22526255 22526325 chr3R 22526386 22526456 37 130 16.0 10.5 13.2 2.6 201 chr3R 22526255 intron CG5346 - chr3R 22526356 intron CG5346 - chr3R 22526456 intron CG5346 - chr3R_37_22525001 chr3R_22525001 RAL-307_125b 3182 chr3R 22538412 22538471 chr3R 22538530 22538591 29 127 4.5 8.5 6.5 3.9 179 chr3R 22538412 intron CG5326 - chr3R 22538502 intron CG5326 - chr3R 22538591 intron CG5326 - chr3R_29_22535001 chr3R_22535001 RAL-307_125b 3183 chr3R 22580601 22580626 chr3R 22580734 22580759 10 133 19.5 10.5 15.0 0.6 158 chr3R 22580601 intergenic CSN6 +,CG33110 + chr3R 22580680 intergenic CSN6 +,CG33110 + chr3R 22580759 intergenic CSN6 +,CG33110 + chr3R_10_22580001 chr3R_22580001 RAL-307_125b 3184 chr3R 22580627 22580672 chr3R 22580731 22580805 24 122 10.0 10.0 10.0 2.2 178 chr3R 22580627 intergenic CSN6 +,CG33110 + chr3R 22580716 intergenic CSN6 +,CG33110 + chr3R 22580805 5` UTR CSN6 + chr3R_24_22580001 chr3R_22580001 RAL-307_125b 3185 chr3R 22648284 22648303 chr3R 22648413 22648432 12 128 24.0 2.0 13.0 0.9 148 chr3R 22648284 intron wake + chr3R 22648358 intron wake + chr3R 22648432 intron wake + chr3R_12_22645001 chr3R_22645001 RAL-307_125b 3186 chr3R 22648305 22648323 chr3R 22648409 22648452 10 126 20.5 2.5 11.5 0.8 147 chr3R 22648305 intron wake + chr3R 22648378 intron wake + chr3R 22648452 intron wake + chr3R_10_22645001 chr3R_22645001 RAL-307_125b 3187 chr3R 22672250 22672331 chr3R 22672393 22672442 26 140 9.0 6.5 7.8 3.0 192 chr3R 22672250 intron wake + chr3R 22672346 intron wake + chr3R 22672442 intron wake + chr3R_26_22670001 chr3R_22670001 RAL-307_125b 3188 chr3R 22684162 22684229 chr3R 22684287 22684312 29 121 11.5 12.5 12.0 2.2 150 chr3R 22684162 intergenic not near genes chr3R 22684237 intergenic not near genes chr3R 22684312 intergenic not near genes chr3R_29_22680001 chr3R_22680001 RAL-307_125b 3189 chr3R 22794465 22794538 chr3R 22794592 22794605 35 123 8.5 0.0 4.2 6.7 140 chr3R 22794465 intergenic CG7029 + chr3R 22794535 intergenic not near genes chr3R 22794605 intergenic not near genes chr3R_35_22790001 chr3R_22790001 RAL-307_125b 3190 chr3R 22818085 22818129 chr3R 22818193 22818226 14 113 6.0 4.0 5.0 2.3 141 chr3R 22818085 intergenic not near genes chr3R 22818156 intergenic not near genes chr3R 22818226 intergenic not near genes chr3R_14_22815001 chr3R_22815001 RAL-307_125b 3191 chr3R 22835770 22835829 chr3R 22835901 22835959 30 126 11.5 7.5 9.5 2.9 189 chr3R 22835770 intergenic not near genes chr3R 22835864 intergenic not near genes chr3R 22835959 intergenic not near genes chr3R_30_22835001 chr3R_22835001 RAL-307_125b 3192 chr3R 22835835 22835849 chr3R 22835894 22835925 5 93 8.5 7.0 7.8 0.6 90 chr3R 22835835 intergenic not near genes chr3R 22835880 intergenic not near genes chr3R 22835925 intergenic not near genes chr3R_5_22835001 chr3R_22835001 RAL-307_125b 3193 chr3R 22836435 22836498 chr3R 22836639 22836672 19 200 12.5 14.0 13.2 1.3 237 chr3R 22836435 intergenic not near genes chr3R 22836554 intergenic not near genes chr3R 22836672 intergenic not near genes chr3R_19_22835001 chr3R_22835001 RAL-307_125b 3194 chr3R 22871396 22871464 chr3R 22871545 22871613 21 149 4.0 10.5 7.2 2.6 217 chr3R 22871396 intergenic not near genes chr3R 22871504 intergenic not near genes chr3R 22871613 intergenic not near genes chr3R_21_22870001 chr3R_22870001 RAL-307_125b 3195 chr3R 22877284 22877324 chr3R 22877427 22877466 17 165 9.5 11.0 10.2 1.5 182 chr3R 22877284 intergenic not near genes chr3R 22877375 intergenic not near genes chr3R 22877466 intergenic not near genes chr3R_17_22875001 chr3R_22875001 RAL-307_125b 3196 chr3R 22880558 22880611 chr3R 22880685 22880697 10 122 8.0 8.0 8.0 1.1 139 chr3R 22880558 intergenic not near genes chr3R 22880628 intergenic not near genes chr3R 22880697 intergenic not near genes chr3R_10_22880001 chr3R_22880001 RAL-307_125b 3197 chr3R 22880885 22880950 chr3R 22881073 22881133 31 187 7.5 9.5 8.5 3.3 248 chr3R 22880885 intergenic not near genes chr3R 22881009 intergenic not near genes chr3R 22881133 intergenic not near genes chr3R_31_22880001 chr3R_22880001 RAL-307_125b 3198 chr3R 22881190 22881219 chr3R 22884946 22884975 Doc 19 3755 9.0 14.5 11.8 1.5 3785 chr3R 22881190 intergenic not near genes chr3R 22883082 intergenic not near genes chr3R 22884975 intergenic not near genes chr3R_19_22880001 chr3R_22880001 RAL-307_125b 3199 chr3R 22927835 22927895 chr3R 22927980 22927996 12 127 8.0 7.0 7.5 1.4 161 chr3R 22927835 intron klg + chr3R 22927916 intron klg + chr3R 22927996 intron klg + chr3R_12_22925001 chr3R_22925001 RAL-307_125b 3200 chr3R 22934597 22934624 chr3R 22934693 22934718 12 112 6.0 7.5 6.8 1.5 121 chr3R 22934597 intron klg + chr3R 22934658 intron klg + chr3R 22934718 intron klg + chr3R_12_22930001 chr3R_22930001 RAL-307_125b 3201 chr3R 22945916 22945956 chr3R 22946046 22946086 17 127 5.0 9.0 7.0 2.1 170 chr3R 22945916 intron klg + chr3R 22946001 intron klg + chr3R 22946086 intron klg + chr3R_17_22945001 chr3R_22945001 RAL-307_125b 3202 chr3R 22949459 22949486 chr3R 22950719 22950746 15 1259 18.5 9.0 13.8 1.0 1287 chr3R 22949459 intron klg + chr3R 22950102 intron klg + chr3R 22950746 intron klg + chr3R_15_22950001 chr3R_22950001 RAL-307_125b 3203 chr3R 22949488 22949525 chr3R 22950717 22950765 17 1253 11.0 8.0 9.5 1.6 1277 chr3R 22949488 intron klg + chr3R 22950126 intron klg + chr3R 22950765 intron klg + chr3R_17_22950001 chr3R_22950001 RAL-307_125b 3204 chr3R 22977035 22977055 chr3R 22977178 22977193 7 138 18.0 6.0 12.0 0.5 158 chr3R 22977035 intergenic CG17244 + chr3R 22977114 intergenic CG17244 + chr3R 22977193 intergenic CG17244 + chr3R_7_22975001 chr3R_22975001 RAL-307_125b 3205 chr3R 22977056 22977102 chr3R 22977174 22977238 11 132 9.0 5.5 7.2 1.3 182 chr3R 22977056 intergenic CG17244 + chr3R 22977147 intergenic CG17244 + chr3R 22977238 intergenic CG17244 + chr3R_11_22975001 chr3R_22975001 RAL-307_125b 3206 chr3R 23090373 23090428 chr3R 23090495 23090561 25 130 7.0 13.0 10.0 2.3 188 chr3R 23090373 intron CG13830 - chr3R 23090467 intron CG13830 - chr3R 23090561 intron CG13830 - chr3R_25_23090001 chr3R_23090001 RAL-307_125b 3207 chr3R 23091217 23091234 chr3R 23091352 23091369 13 135 14.5 8.0 11.2 1.1 152 chr3R 23091217 intron CG13830 - chr3R 23091293 intron CG13830 - chr3R 23091369 intron CG13830 - chr3R_13_23090001 chr3R_23090001 RAL-307_125b 3208 chr3R 23091235 23091281 chr3R 23091341 23091416 20 129 9.0 6.5 7.8 2.3 181 chr3R 23091235 intron CG13830 - chr3R 23091326 intron CG13830 - chr3R 23091416 intron CG13830 - chr3R_20_23090001 chr3R_23090001 RAL-307_125b 3209 chr3R 23143763 23143822 chr3R 23144288 23144335 15 520 5.5 8.5 7.0 1.9 572 chr3R 23143763 intergenic not near genes chr3R 23144049 intergenic not near genes chr3R 23144335 intergenic not near genes chr3R_15_23140001 chr3R_23140001 RAL-307_125b 3210 chr3R 23176243 23176314 chr3R 23176864 23176920 35 611 13.5 8.0 10.8 3.0 677 chr3R 23176243 intron Irk1 + chr3R 23176582 intron Irk1 + chr3R 23176920 intron Irk1 + chr3R_35_23175001 chr3R_23175001 RAL-307_125b 3211 chr3R 23225007 23225035 chr3R 23225133 23225161 10 126 17.5 0.0 8.8 1.0 154 chr3R 23225007 intron cnc - chr3R 23225084 intron cnc - chr3R 23225161 intron cnc - chr3R_10_23225001 chr3R_23225001 RAL-307_125b 3212 chr3R 23234806 23234840 chr3R 23234927 23234967 19 126 11.5 14.5 13.0 1.4 161 chr3R 23234806 intron CG4467 - chr3R 23234886 intron CG4467 - chr3R 23234967 intron CG4467 - chr3R_19_23230001 chr3R_23230001 RAL-307_125b 3213 chr3R 23319658 23319676 chr3R 23319787 23319805 14 129 0.0 21.5 10.8 1.2 147 chr3R 23319658 intron pnt - chr3R 23319732 intron pnt - chr3R 23319805 intron pnt - chr3R_14_23315001 chr3R_23315001 RAL-307_125b 3214 chr3R 23335395 23335458 chr3R 23335523 23335571 16 126 5.5 9.0 7.2 2.0 176 chr3R 23335395 intron pnt - chr3R 23335483 intron pnt - chr3R 23335571 intron pnt - chr3R_16_23335001 chr3R_23335001 RAL-307_125b 3215 chr3R 23356956 23356961 chr3R 23357092 23357097 6 136 14.5 10.5 12.5 0.4 141 chr3R 23356956 intron Sec13 + chr3R 23357026 intron Sec13 + chr3R 23357097 intron Sec13 + chr3R_6_23355001 chr3R_23355001 RAL-307_125b 3216 chr3R 23356962 23356997 chr3R 23357089 23357133 19 135 11.0 10.5 10.8 1.6 171 chr3R 23356962 intron Sec13 + chr3R 23357048 intron Sec13 + chr3R 23357133 intron Sec13 + chr3R_19_23355001 chr3R_23355001 RAL-307_125b 3217 chr3R 23360177 23360185 chr3R 23360303 23360311 7 126 0.0 13.0 6.5 0.9 134 chr3R 23360177 3` UTR RpS3 + chr3R 23360244 intergenic RpS3 + chr3R 23360311 intergenic RpS3 + chr3R_7_23360001 chr3R_23360001 RAL-307_125b 3218 chr3R 23373453 23373527 chr3R 23373723 23373797 43 268 10.0 9.0 9.5 4.1 344 chr3R 23373453 exon CG42827 + chr3R 23373625 intergenic CG42827 +,CG42828 + chr3R 23373797 intron CG42828 + chr3R_43_23370001 chr3R_23370001 RAL-307_125b 3219 chr3R 23385543 23385614 chr3R 23385715 23385787 29 169 3.0 11.5 7.2 3.5 244 chr3R 23385543 intergenic not near genes chr3R 23385665 intergenic not near genes chr3R 23385787 intergenic not near genes chr3R_29_23385001 chr3R_23385001 RAL-307_125b 3220 chr3R 23390915 23390955 chr3R 23391047 23391084 5 131 3.5 4.0 3.8 1.0 169 chr3R 23390915 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391084 intergenic not near genes chr3R_5_23390001 chr3R_23390001 RAL-307_125b 3221 chr3R 23557209 23557243 chr3R 23557298 23557361 8 109 4.0 9.5 6.8 1.0 152 chr3R 23557209 intergenic beat-IV +,CG10164 - chr3R 23557285 intergenic beat-IV +,CG10164 - chr3R 23557361 intergenic beat-IV +,CG10164 - chr3R_8_23555001 chr3R_23555001 RAL-307_125b 3222 chr3R 23558350 23558426 chr3R 23560181 23560257 Bari1 23 1829 9.0 9.0 9.0 2.3 1907 chr3R 23558350 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560257 intron beat-IV + chr3R_23_23555001 chr3R_23555001 RAL-307_125b 3223 chr3R 23564395 23564466 chr3R 23564589 23564660 35 194 12.5 9.0 10.8 3.0 265 chr3R 23564395 intron beat-IV + chr3R 23564528 intron beat-IV + chr3R 23564660 intron beat-IV + chr3R_35_23560001 chr3R_23560001 RAL-307_125b 3224 chr3R 23643920 23643950 chr3R 23644050 23644080 13 130 7.5 11.5 9.5 1.2 160 chr3R 23643920 intron CG31145 - chr3R 23644000 intron CG31145 - chr3R 23644080 intron CG31145 - chr3R_13_23640001 chr3R_23640001 RAL-307_125b 3225 chr3R 23684654 23684718 chr3R 23685190 23685233 roo 11 531 6.5 4.5 5.5 1.7 579 chr3R 23684654 exon CG18754 + chr3R 23684944 intron CG18754 + chr3R 23685233 exon CG18754 + chr3R_11_23680001 chr3R_23680001 RAL-307_125b 3226 chr3R 23688433 23688482 chr3R 23688573 23688621 12 133 13.5 0.5 7.0 1.5 188 chr3R 23688433 intergenic SPE + chr3R 23688527 intergenic SPE +,CG10254 - chr3R 23688621 intergenic CG10254 -,SPE + chr3R_12_23685001 chr3R_23685001 RAL-307_125b 3227 chr3R 23688488 23688505 chr3R 23688564 23688619 6 112 8.0 0.5 4.2 1.2 131 chr3R 23688488 intergenic SPE + chr3R 23688554 intergenic SPE +,CG10254 - chr3R 23688619 intergenic CG10254 -,SPE + chr3R_6_23685001 chr3R_23685001 RAL-307_125b 3228 chr3R 23826148 23826193 chr3R 23826454 23826526 7 329 5.5 5.5 5.5 1.1 378 chr3R 23826148 intron CG34355 + chr3R 23826337 intron,5` UTR CG34355 +,snRNA:U1:95Cc + chr3R 23826526 intron CG34355 + chr3R_7_23825001 chr3R_23825001 RAL-307_125b 3229 chr3R 23835366 23835423 chr3R 23844566 23844623 roo 29 9200 12.0 2.5 7.2 3.5 9257 chr3R 23835366 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844623 intron CG34355 + chr3R_29_23835001 chr3R_23835001 RAL-307_125b 3230 chr3R 23851042 23851078 chr3R 23858759 23858795 opus 16 7716 12.5 19.5 16.0 0.9 7753 chr3R 23851042 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858795 intergenic not near genes chr3R_16_23850001 chr3R_23850001 RAL-307_125b 3231 chr3R 23873958 23873967 chr3R 23874066 23874079 4 110 14.5 17.0 15.8 0.2 121 chr3R 23873958 intron Pli - chr3R 23874018 intron Pli - chr3R 23874079 intron Pli - chr3R_4_23870001 chr3R_23870001 RAL-307_125b 3232 chr3R 23883085 23883124 chr3R 23883470 23883532 12 395 10.0 4.5 7.2 1.5 447 chr3R 23883085 intron Pli - chr3R 23883308 intron Pli - chr3R 23883532 intron Pli - chr3R_12_23880001 chr3R_23880001 RAL-307_125b 3233 chr3R 23944875 23944891 chr3R 23945010 23945026 12 134 1.5 9.0 5.2 1.9 151 chr3R 23944875 intron CG12268 - chr3R 23944950 intron CG12268 - chr3R 23945026 exon CG12268 - chr3R_12_23940001 chr3R_23940001 RAL-307_125b 3234 chr3R 23944892 23944932 chr3R 23945004 23945067 18 130 0.5 7.0 3.8 3.8 175 chr3R 23944892 intron CG12268 - chr3R 23944980 intron CG12268 - chr3R 23945067 exon CG12268 - chr3R_18_23940001 chr3R_23940001 RAL-307_125b 3235 chr3R 23948991 23949075 chr3R 23949118 23949201 53 125 9.5 10.5 10.0 4.8 210 chr3R 23948991 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949201 intergenic not near genes chr3R_53_23945001 chr3R_23945001 RAL-307_125b 3236 chr3R 23963373 23963435 chr3R 23963506 23963568 26 131 15.5 10.0 12.8 1.9 195 chr3R 23963373 intron CG31140 + chr3R 23963470 intron CG31140 + chr3R 23963568 intron CG31140 + chr3R_26_23960001 chr3R_23960001 RAL-307_125b 3237 chr3R 24011619 24011679 chr3R 24011752 24011812 8 133 6.0 0.5 3.2 1.9 193 chr3R 24011619 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011812 intron KrT95D - chr3R_8_24010001 chr3R_24010001 RAL-307_125b 3238 chr3R 24072072 24072108 chr3R 24072534 24072569 jockey 12 481 14.0 13.5 13.8 0.8 497 chr3R 24072072 intron 4EHP - chr3R 24072320 intron 4EHP - chr3R 24072569 intron 4EHP - chr3R_12_24070001 chr3R_24070001 RAL-307_125b 3239 chr3R 24076880 24076918 chr3R 24078397 24078414 hobo 14 1515 8.5 20.5 14.5 0.9 1534 chr3R 24076880 intron 4EHP - chr3R 24077647 intron 4EHP - chr3R 24078414 intron 4EHP - chr3R_14_24075001 chr3R_24075001 RAL-307_125b 3240 chr3R 24076922 24076940 chr3R 24078388 24078457 hobo 8 1510 7.0 19.5 13.2 0.6 1535 chr3R 24076922 intron 4EHP - chr3R 24077690 intron 4EHP - chr3R 24078457 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-307_125b 3241 chr3R 24116515 24116570 chr3R 24116667 24116723 35 152 16.0 7.0 11.5 2.8 208 chr3R 24116515 intron Rootletin + chr3R 24116619 intron Rootletin + chr3R 24116723 intron Rootletin + chr3R_35_24115001 chr3R_24115001 RAL-307_125b 3242 chr3R 24199692 24199716 chr3R 24199822 24199846 10 128 16.5 5.5 11.0 0.8 154 chr3R 24199692 intron twin - chr3R 24199769 intron twin - chr3R 24199846 intron twin - chr3R_10_24195001 chr3R_24195001 RAL-307_125b 3243 chr3R 24199718 24199763 chr3R 24199817 24199863 17 124 7.5 5.5 6.5 2.3 145 chr3R 24199718 intron twin - chr3R 24199790 intron twin - chr3R 24199863 intron twin - chr3R_17_24195001 chr3R_24195001 RAL-307_125b 3244 chr3R 24207190 24207241 chr3R 24212294 24212328 flea 17 5116 9.5 12.0 10.8 1.4 5138 chr3R 24207190 intron twin - chr3R 24209759 intron twin - chr3R 24212328 intron twin - chr3R_17_24205001 chr3R_24205001 RAL-307_125b 3245 chr3R 24431567 24431623 chr3R 24431696 24431752 38 129 4.5 7.0 5.8 5.6 185 chr3R 24431567 intron nAChRalpha1 - chr3R 24431660 intron nAChRalpha1 - chr3R 24431752 intron nAChRalpha1 - chr3R_38_24430001 chr3R_24430001 RAL-307_125b 3246 chr3R 24434197 24434265 chr3R 24434324 24434387 22 124 11.0 7.0 9.0 2.2 190 chr3R 24434197 intron nAChRalpha1 - chr3R 24434292 intron nAChRalpha1 - chr3R 24434387 intron nAChRalpha1 - chr3R_22_24430001 chr3R_24430001 RAL-307_125b 3247 chr3R 24447673 24447756 chr3R 24447810 24447893 10 133 6.0 4.5 5.2 1.6 220 chr3R 24447673 intron nAChRalpha1 - chr3R 24447783 intron nAChRalpha1 - chr3R 24447893 intron nAChRalpha1 - chr3R_10_24445001 chr3R_24445001 RAL-307_125b 3248 chr3R 24483791 24483850 chr3R 24484155 24484216 15 359 9.0 1.0 5.0 2.5 425 chr3R 24483791 intergenic not near genes chr3R 24484004 intergenic not near genes chr3R 24484216 intergenic not near genes chr3R_15_24480001 chr3R_24480001 RAL-307_125b 3249 chr3R 24493235 24493271 chr3R 24493514 24493550 BS 19 279 21.0 15.5 18.2 1.0 315 chr3R 24493235 intergenic not near genes chr3R 24493392 intergenic not near genes chr3R 24493550 intergenic not near genes chr3R_19_24490001 chr3R_24490001 RAL-307_125b 3250 chr3R 24493274 24493293 chr3R 24493508 24493549 BS 17 272 14.0 13.5 13.8 1.1 275 chr3R 24493274 intergenic not near genes chr3R 24493412 intergenic not near genes chr3R 24493549 intergenic not near genes chr3R_17_24490001 chr3R_24490001 RAL-307_125b 3251 chr3R 24495246 24495250 chr3R 24495375 24495379 4 129 24.5 12.0 18.2 0.2 133 chr3R 24495246 intergenic not near genes chr3R 24495312 intergenic not near genes chr3R 24495379 intergenic not near genes chr3R_4_24495001 chr3R_24495001 RAL-307_125b 3252 chr3R 24495255 24495316 chr3R 24495367 24495440 27 120 8.0 11.0 9.5 2.6 185 chr3R 24495255 intergenic not near genes chr3R 24495348 intergenic not near genes chr3R 24495440 intergenic not near genes chr3R_27_24495001 chr3R_24495001 RAL-307_125b 3253 chr3R 24594628 24594664 chr3R 24594918 24594949 pogo 16 289 12.0 10.0 11.0 1.3 321 chr3R 24594628 intron mld + chr3R 24594788 intron mld + chr3R 24594949 intron mld + chr3R_16_24590001 chr3R_24590001 RAL-307_125b 3254 chr3R 24605537 24605555 chr3R 24605664 24605682 9 135 14.5 19.0 16.8 0.5 145 chr3R 24605537 intron mld + chr3R 24605610 intron mld + chr3R 24605682 intron mld + chr3R_9_24605001 chr3R_24605001 RAL-307_125b 3255 chr3R 24667556 24667595 chr3R 24667683 24667721 15 127 13.5 0.5 7.0 1.9 165 chr3R 24667556 intron slo + chr3R 24667638 intron slo + chr3R 24667721 intron slo + chr3R_15_24665001 chr3R_24665001 RAL-307_125b 3256 chr3R 24670005 24670198 chr3R 24670165 24670332 37 154 1.5 0.0 0.8 20.6 327 chr3R 24670005 intron slo + chr3R 24670168 intron slo + chr3R 24670332 intron slo + chr3R_37_24670001 chr3R_24670001 RAL-307_125b 3257 chr3R 24730051 24730064 chr3R 24732479 24732492 Doc 6 2427 22.0 4.0 13.0 0.4 2441 chr3R 24730051 intron tok + chr3R 24731272 intron tok + chr3R 24732492 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-307_125b 3258 chr3R 24730066 24730118 chr3R 24732469 24732553 Doc 12 2419 11.5 3.5 7.5 1.4 2487 chr3R 24730066 intron tok + chr3R 24731310 intron tok + chr3R 24732553 intron tok + chr3R_12_24730001 chr3R_24730001 RAL-307_125b 3259 chr3R 24764341 24764351 chr3R 24764474 24764478 9 132 28.0 15.0 21.5 0.4 137 chr3R 24764341 intron AstA - chr3R 24764410 intron AstA - chr3R 24764478 intron AstA - chr3R_9_24760001 chr3R_24760001 RAL-307_125b 3260 chr3R 24764353 24764403 chr3R 24764469 24764497 25 128 14.5 13.0 13.8 1.7 144 chr3R 24764353 intron AstA - chr3R 24764425 intron AstA - chr3R 24764497 intron AstA - chr3R_25_24760001 chr3R_24760001 RAL-307_125b 3261 chr3R 24785031 24785104 chr3R 24785157 24785229 12 119 17.5 17.5 17.5 0.6 198 chr3R 24785031 3` UTR CG5805 - chr3R 24785130 3` UTR CG5805 - chr3R 24785229 3` UTR CG5805 - chr3R_12_24785001 chr3R_24785001 RAL-307_125b 3262 chr3R 24787498 24787559 chr3R 24787624 24787685 22 126 6.5 0.0 3.2 5.2 187 chr3R 24787498 intergenic CG5805 - chr3R 24787592 intergenic CG5805 -,Ets96B + chr3R 24787685 intergenic CG5805 -,Ets96B + chr3R_22_24785001 chr3R_24785001 RAL-307_125b 3263 chr3R 24789944 24790009 chr3R 24790134 24790188 20 184 11.5 8.0 9.8 1.9 244 chr3R 24789944 intron,5` UTR Ets96B +,CG13634 - chr3R 24790066 intron,5` UTR Ets96B +,CG13634 - chr3R 24790188 intron Ets96B + chr3R_20_24790001 chr3R_24790001 RAL-307_125b 3264 chr3R 24893433 24893482 chr3R 24893563 24893611 13 130 9.5 9.0 9.2 1.3 178 chr3R 24893433 intron CG31121 - chr3R 24893522 intron CG31121 - chr3R 24893611 intron CG31121 - chr3R_13_24890001 chr3R_24890001 RAL-307_125b 3265 chr3R 24903894 24903956 chr3R 24904014 24904093 26 135 8.5 4.5 6.5 3.5 199 chr3R 24903894 intron CG13643 - chr3R 24903994 intron CG13643 - chr3R 24904093 intron CG13643 - chr3R_26_24900001 chr3R_24900001 RAL-307_125b 3266 chr3R 24912440 24912510 chr3R 24912572 24912642 28 132 9.0 0.5 4.8 4.8 202 chr3R 24912440 intergenic not near genes chr3R 24912541 intergenic CR44267 + chr3R 24912642 intergenic CR44267 + chr3R_28_24910001 chr3R_24910001 RAL-307_125b 3267 chr3R 24927087 24927148 chr3R 24931928 24931961 Doc 32 4838 12.0 6.0 9.0 3.2 4874 chr3R 24927087 intergenic Trf4-2 + chr3R 24929524 intergenic not near genes chr3R 24931961 intergenic CG11771 + chr3R_32_24925001 chr3R_24925001 RAL-307_125b 3268 chr3R 24974862 24974936 chr3R 24974991 24975025 36 127 8.5 9.0 8.8 3.7 163 chr3R 24974862 intergenic not near genes chr3R 24974944 intergenic not near genes chr3R 24975025 intergenic not near genes chr3R_36_24970001 chr3R_24970001 RAL-307_125b 3269 chr3R 25004856 25004920 chr3R 25004988 25005053 21 132 8.5 4.0 6.2 2.9 197 chr3R 25004856 intron tnc + chr3R 25004954 intron tnc + chr3R 25005053 intron tnc + chr3R_21_25000001 chr3R_25000001 RAL-307_125b 3270 chr3R 25018212 25018231 chr3R 25018339 25018358 9 124 15.5 9.5 12.5 0.7 146 chr3R 25018212 exon tnc + chr3R 25018285 exon tnc + chr3R 25018358 exon tnc + chr3R_9_25015001 chr3R_25015001 RAL-307_125b 3271 chr3R 25018232 25018286 chr3R 25018338 25018342 26 111 8.5 9.5 9.0 2.6 110 chr3R 25018232 exon tnc + chr3R 25018287 exon tnc + chr3R 25018342 exon tnc + chr3R_26_25015001 chr3R_25015001 RAL-307_125b 3272 chr3R 25027486 25027564 chr3R 25027749 25027827 37 260 11.5 10.0 10.8 3.1 341 chr3R 25027486 intron Hr96 + chr3R 25027656 intron Hr96 + chr3R 25027827 intron Hr96 + chr3R_37_25025001 chr3R_25025001 RAL-307_125b 3273 chr3R 25041509 25041524 chr3R 25041635 25041652 5 127 2.5 19.0 10.8 0.4 143 chr3R 25041509 intron 5PtaseI - chr3R 25041580 intron 5PtaseI - chr3R 25041652 intron 5PtaseI - chr3R_5_25040001 chr3R_25040001 RAL-307_125b 3274 chr3R 25081864 25081922 chr3R 25081984 25082063 24 133 6.5 10.0 8.2 2.6 199 chr3R 25081864 intergenic not near genes chr3R 25081964 intergenic not near genes chr3R 25082063 intergenic not near genes chr3R_24_25080001 chr3R_25080001 RAL-307_125b 3275 chr3R 25086014 25086043 chr3R 25086140 25086169 22 126 19.5 7.5 13.5 1.5 155 chr3R 25086014 intergenic not near genes chr3R 25086092 intergenic not near genes chr3R 25086169 intergenic not near genes chr3R_22_25085001 chr3R_25085001 RAL-307_125b 3276 chr3R 25097077 25097089 chr3R 25097254 25097266 5 177 0.0 14.5 7.2 0.6 189 chr3R 25097077 intergenic not near genes chr3R 25097172 intergenic CG33095 +,CG33096 + chr3R 25097266 intergenic CG33095 +,CG33096 + chr3R_5_25095001 chr3R_25095001 RAL-307_125b 3277 chr3R 25136355 25136420 chr3R 25136485 25136550 37 130 12.0 10.5 11.2 3.0 195 chr3R 25136355 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136550 3` UTR Bili + chr3R_37_25135001 chr3R_25135001 RAL-307_125b 3278 chr3R 25166315 25166388 chr3R 25166441 25166472 31 124 14.5 12.0 13.2 2.2 157 chr3R 25166315 intergenic not near genes chr3R 25166394 intergenic not near genes chr3R 25166472 intergenic not near genes chr3R_31_25165001 chr3R_25165001 RAL-307_125b 3279 chr3R 25302634 25302701 chr3R 25302933 25302977 21 296 8.5 9.0 8.8 2.1 343 chr3R 25302634 exon CG31370 + chr3R 25302806 exon CG31370 + chr3R 25302977 exon CG31370 + chr3R_21_25300001 chr3R_25300001 RAL-307_125b 3280 chr3R 25368429 25368505 chr3R 25368596 25368677 26 167 9.5 0.0 4.8 4.5 248 chr3R 25368429 intron Fur1 - chr3R 25368553 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_26_25365001 chr3R_25365001 RAL-307_125b 3281 chr3R 25465005 25465086 chr3R 25465132 25465213 15 127 8.0 5.0 6.5 2.0 208 chr3R 25465005 intron Fur1 - chr3R 25465109 intron Fur1 - chr3R 25465213 intron Fur1 - chr3R_15_25465001 chr3R_25465001 RAL-307_125b 3282 chr3R 25514397 25514446 chr3R 25514528 25514577 21 131 1.0 8.5 4.8 3.6 180 chr3R 25514397 intergenic not near genes chr3R 25514487 intergenic not near genes chr3R 25514577 intergenic not near genes chr3R_21_25510001 chr3R_25510001 RAL-307_125b 3283 chr3R 25520946 25520984 chr3R 25521095 25521128 12 149 19.5 4.5 12.0 0.9 182 chr3R 25520946 intron msi + chr3R 25521037 intron msi + chr3R 25521128 intron msi + chr3R_12_25520001 chr3R_25520001 RAL-307_125b 3284 chr3R 25528001 25528043 chr3R 25528154 25528192 22 150 18.0 11.5 14.8 1.4 191 chr3R 25528001 intron msi + chr3R 25528096 intron msi + chr3R 25528192 intron msi + chr3R_22_25525001 chr3R_25525001 RAL-307_125b 3285 chr3R 25689084 25689157 chr3R 25689242 25689300 33 152 7.0 10.0 8.5 3.5 216 chr3R 25689084 intergenic not near genes chr3R 25689192 intergenic not near genes chr3R 25689300 intergenic not near genes chr3R_33_25685001 chr3R_25685001 RAL-307_125b 3286 chr3R 25725789 25725860 chr3R 25734999 25735000 roo 32 9207 11.0 14.0 12.5 2.4 9211 chr3R 25725789 intron LpR2 - chr3R 25730394 intron LpR2 - chr3R 25735000 intron LpR2 - chr3R_32_25730001 chr3R_25730001 RAL-307_125b 3287 chr3R 25736208 25736281 chr3R 25736347 25736420 36 135 12.5 9.5 11.0 3.0 212 chr3R 25736208 intron LpR2 - chr3R 25736314 intron LpR2 - chr3R 25736420 intron LpR2 - chr3R_36_25735001 chr3R_25735001 RAL-307_125b 3288 chr3R 25832660 25832721 chr3R 25841892 25841895 roo 16 9222 5.0 8.0 6.5 2.1 9235 chr3R 25832660 exon alpha4GT2 + chr3R 25837278 intron alpha4GT2 + chr3R 25841895 exon alpha4GT2 + chr3R_16_25835001 chr3R_25835001 RAL-307_125b 3289 chr3R 25847639 25847720 chr3R 25847786 25847854 27 144 9.5 4.0 6.8 3.5 215 chr3R 25847639 intergenic CR45656 -,CR45657 + chr3R 25847746 intergenic CR45656 -,CR45657 + chr3R 25847854 intergenic CR45656 -,CR45657 + chr3R_27_25845001 chr3R_25845001 RAL-307_125b 3290 chr3R 25863899 25863971 chr3R 25864037 25864109 20 136 5.0 5.0 5.0 3.3 210 chr3R 25863899 intron CG5890 + chr3R 25864004 intron CG5890 + chr3R 25864109 intron CG5890 + chr3R_20_25860001 chr3R_25860001 RAL-307_125b 3291 chr3R 25871057 25871079 chr3R 25871239 25871264 17 184 16.5 9.0 12.8 1.2 207 chr3R 25871057 3` UTR CG5890 + chr3R 25871160 3` UTR CG5890 + chr3R 25871264 3` UTR CG5890 + chr3R_17_25870001 chr3R_25870001 RAL-307_125b 3292 chr3R 25871080 25871122 chr3R 25871233 25871292 19 178 8.0 7.5 7.8 2.2 212 chr3R 25871080 3` UTR CG5890 + chr3R 25871186 3` UTR CG5890 + chr3R 25871292 3` UTR CG5890 + chr3R_19_25870001 chr3R_25870001 RAL-307_125b 3293 chr3R 25905589 25905646 chr3R 25905742 25905792 21 153 12.5 6.0 9.2 2.1 203 chr3R 25905589 intron CR43259 - chr3R 25905690 intron CR43259 - chr3R 25905792 intron CR43259 - chr3R_21_25905001 chr3R_25905001 RAL-307_125b 3294 chr3R 25982032 25982111 chr3R 25982170 25982247 19 136 6.0 5.5 5.8 2.8 215 chr3R 25982032 3` UTR CG42261 + chr3R 25982140 3` UTR CG42261 + chr3R 25982247 3` UTR CG42261 + chr3R_19_25980001 chr3R_25980001 RAL-307_125b 3295 chr3R 25983647 25983720 chr3R 25983794 25983858 24 142 4.5 4.5 4.5 4.4 211 chr3R 25983647 exon Nf1 + chr3R 25983752 intron Nf1 + chr3R 25983858 exon Nf1 + chr3R_24_25980001 chr3R_25980001 RAL-307_125b 3296 chr3R 25997222 25997250 chr3R 25997359 25997387 16 137 9.5 5.5 7.5 1.9 165 chr3R 25997222 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997304 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997387 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_16_25995001 chr3R_25995001 RAL-307_125b 3297 chr3R 26018639 26018688 chr3R 26018776 26018819 9 135 14.0 7.5 10.8 0.8 180 chr3R 26018639 3` UTR CR43643 - chr3R 26018729 3` UTR CR43643 - chr3R 26018819 3` UTR CR43643 - chr3R_9_26015001 chr3R_26015001 RAL-307_125b 3298 chr3R 26038313 26038397 chr3R 26038449 26038532 32 133 9.5 10.0 9.8 3.0 219 chr3R 26038313 intergenic E(spl)m7-HLH + chr3R 26038422 intergenic E(spl)m7-HLH + chr3R 26038532 intergenic not near genes chr3R_32_26035001 chr3R_26035001 RAL-307_125b 3299 chr3R 26038939 26038997 chr3R 26039105 26039183 31 184 10.0 0.0 5.0 5.2 244 chr3R 26038939 intergenic not near genes chr3R 26039061 intergenic not near genes chr3R 26039183 intergenic not near genes chr3R_31_26035001 chr3R_26035001 RAL-307_125b 3300 chr3R 26093796 26093873 chr3R 26093924 26093991 25 125 12.0 11.5 11.8 2.0 195 chr3R 26093796 intron dys - chr3R 26093894 intron dys - chr3R 26093991 intron dys - chr3R_25_26090001 chr3R_26090001 RAL-307_125b 3301 chr3R 26102541 26102549 chr3R 26102722 26102730 6 180 5.5 7.5 6.5 0.8 189 chr3R 26102541 intergenic not near genes chr3R 26102636 intergenic not near genes chr3R 26102730 intergenic not near genes chr3R_6_26100001 chr3R_26100001 RAL-307_125b 3302 chr3R 26122431 26122480 chr3R 26122542 26122548 22 121 2.0 12.0 7.0 2.8 117 chr3R 26122431 intron CG31324 + chr3R 26122490 intron CG31324 + chr3R 26122548 intron CG31324 + chr3R_22_26120001 chr3R_26120001 RAL-307_125b 3303 chr3R 26131619 26131687 chr3R 26131777 26131845 16 158 1.0 6.5 3.8 3.3 226 chr3R 26131619 intergenic not near genes chr3R 26131732 intergenic not near genes chr3R 26131845 intergenic not near genes chr3R_16_26130001 chr3R_26130001 RAL-307_125b 3304 chr3R 26166597 26166620 chr3R 26166740 26166763 9 142 17.5 8.0 12.8 0.7 166 chr3R 26166597 intergenic not near genes chr3R 26166680 intergenic not near genes chr3R 26166763 intergenic not near genes chr3R_9_26165001 chr3R_26165001 RAL-307_125b 3305 chr3R 26166622 26166666 chr3R 26166738 26166809 29 140 9.0 7.5 8.2 3.2 187 chr3R 26166622 intergenic not near genes chr3R 26166716 intergenic not near genes chr3R 26166809 intergenic not near genes chr3R_29_26165001 chr3R_26165001 RAL-307_125b 3306 chr3R 26214923 26214939 chr3R 26215054 26215070 8 130 6.0 15.0 10.5 0.7 147 chr3R 26214923 intergenic not near genes chr3R 26214996 intergenic not near genes chr3R 26215070 intergenic not near genes chr3R_8_26210001 chr3R_26210001 RAL-307_125b 3307 chr3R 26239779 26239851 chr3R 26240140 26240212 39 359 9.5 6.5 8.0 4.3 433 chr3R 26239779 intron CR42745 + chr3R 26239996 intron CR42745 + chr3R 26240212 intron CR42745 + chr3R_39_26235001 chr3R_26235001 RAL-307_125b 3308 chr3R 26277315 26277381 chr3R 26277486 26277520 26 166 5.0 7.0 6.0 3.7 205 chr3R 26277315 intergenic CG6154 + chr3R 26277418 intergenic CG6154 + chr3R 26277520 intergenic CG6154 + chr3R_26_26275001 chr3R_26275001 RAL-307_125b 3309 chr3R 26292067 26292119 chr3R 26292197 26292249 18 128 10.5 6.5 8.5 1.9 182 chr3R 26292067 intergenic not near genes chr3R 26292158 intergenic not near genes chr3R 26292249 intergenic not near genes chr3R_18_26290001 chr3R_26290001 RAL-307_125b 3310 chr3R 26317370 26317383 chr3R 26317498 26317516 9 130 23.5 5.0 14.2 0.6 146 chr3R 26317370 intergenic not near genes chr3R 26317443 intergenic not near genes chr3R 26317516 intergenic not near genes chr3R_9_26315001 chr3R_26315001 RAL-307_125b 3311 chr3R 26317384 26317419 chr3R 26317489 26317534 16 127 13.0 4.0 8.5 1.7 150 chr3R 26317384 intergenic not near genes chr3R 26317459 intergenic not near genes chr3R 26317534 intergenic not near genes chr3R_16_26315001 chr3R_26315001 RAL-307_125b 3312 chr3R 26326649 26326676 chr3R 26326777 26326805 7 129 12.5 10.5 11.5 0.6 156 chr3R 26326649 intron CG33970 + chr3R 26326727 intron CG33970 + chr3R 26326805 intron CG33970 + chr3R_7_26325001 chr3R_26325001 RAL-307_125b 3313 chr3R 26332842 26332883 chr3R 26332981 26333022 19 138 17.5 13.5 15.5 1.2 180 chr3R 26332842 intron CG33970 + chr3R 26332932 intron CG33970 + chr3R 26333022 intron CG33970 + chr3R_19_26330001 chr3R_26330001 RAL-307_125b 3314 chr3R 26332886 26332911 chr3R 26332975 26333035 16 133 11.0 12.5 11.8 1.2 149 chr3R 26332886 intron CG33970 + chr3R 26332960 intron CG33970 + chr3R 26333035 intron CG33970 + chr3R_16_26330001 chr3R_26330001 RAL-307_125b 3315 chr3R 26349216 26349237 chr3R 26349362 26349383 9 146 9.5 0.0 4.8 1.6 167 chr3R 26349216 intron CG33970 + chr3R 26349300 intron CG33970 + chr3R 26349383 intron CG33970 + chr3R_9_26345001 chr3R_26345001 RAL-307_125b 3316 chr3R 26365063 26365138 chr3R 26365198 26365272 34 133 7.5 10.0 8.8 3.5 209 chr3R 26365063 intergenic not near genes chr3R 26365168 intergenic not near genes chr3R 26365272 intergenic not near genes chr3R_34_26365001 chr3R_26365001 RAL-307_125b 3317 chr3R 26376278 26376353 chr3R 26385488 26385577 roo 22 9212 8.5 0.0 4.2 4.2 9299 chr3R 26376278 intergenic not near genes chr3R 26380928 intergenic not near genes chr3R 26385577 intergenic not near genes chr3R_22_26380001 chr3R_26380001 RAL-307_125b 3318 chr3R 26387286 26387351 chr3R 26387401 26387478 19 114 7.5 6.0 6.8 2.4 192 chr3R 26387286 intergenic not near genes chr3R 26387382 intergenic not near genes chr3R 26387478 intergenic not near genes chr3R_19_26385001 chr3R_26385001 RAL-307_125b 3319 chr3R 26405871 26405931 chr3R 26405997 26406057 29 126 0.0 11.5 5.8 4.3 186 chr3R 26405871 intergenic not near genes chr3R 26405964 intergenic not near genes chr3R 26406057 intergenic not near genes chr3R_29_26405001 chr3R_26405001 RAL-307_125b 3320 chr3R 26458202 26458220 chr3R 26458301 26458331 5 119 5.0 5.5 5.2 0.8 129 chr3R 26458202 intergenic CG14238 + chr3R 26458266 5` UTR CG14238 + chr3R 26458331 5` UTR CG14238 + chr3R_5_26455001 chr3R_26455001 RAL-307_125b 3321 chr3R 26462757 26462802 chr3R 26463036 26463081 22 278 9.0 5.5 7.2 2.7 324 chr3R 26462757 intron CG5455 + chr3R 26462919 intron CG5455 + chr3R 26463081 intron CG5455 + chr3R_22_26460001 chr3R_26460001 RAL-307_125b 3322 chr3R 26489090 26489135 chr3R 26489220 26489265 17 126 12.5 10.5 11.5 1.4 175 chr3R 26489090 intron plum - chr3R 26489178 intron plum - chr3R 26489265 intron plum - chr3R_17_26485001 chr3R_26485001 RAL-307_125b 3323 chr3R 26489140 26489164 chr3R 26489210 26489276 5 103 10.0 9.0 9.5 0.5 136 chr3R 26489140 intron plum - chr3R 26489208 intron plum - chr3R 26489276 intron plum - chr3R_5_26485001 chr3R_26485001 RAL-307_125b 3324 chr3R 26510472 26510523 chr3R 26519583 26519634 roo 14 9109 0.0 13.0 6.5 1.9 9162 chr3R 26510472 intron plum - chr3R 26515053 intron plum - chr3R 26519634 intron,5` UTR plum -,CR45226 + chr3R_14_26515001 chr3R_26515001 RAL-307_125b 3325 chr3R 26558283 26558350 chr3R 26565645 26565685 Stalker4 19 7355 11.0 6.5 8.8 1.9 7402 chr3R 26558283 intron scrib + chr3R 26561984 intron scrib + chr3R 26565685 intron scrib + chr3R_19_26560001 chr3R_26560001 RAL-307_125b 3326 chr3R 26641590 26641663 chr3R 26641727 26641765 18 128 8.0 8.5 8.2 2.0 175 chr3R 26641590 intergenic not near genes chr3R 26641678 intergenic not near genes chr3R 26641765 intergenic not near genes chr3R_18_26640001 chr3R_26640001 RAL-307_125b 3327 chr3R 26642687 26642696 chr3R 26643130 26643139 jockey 7 443 31.5 13.0 22.2 0.3 452 chr3R 26642687 intergenic not near genes chr3R 26642913 intergenic not near genes chr3R 26643139 intergenic not near genes chr3R_7_26640001 chr3R_26640001 RAL-307_125b 3328 chr3R 26642697 26642752 chr3R 26643129 26643195 jockey 31 438 19.5 13.0 16.2 1.8 498 chr3R 26642697 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643195 intergenic not near genes chr3R_31_26640001 chr3R_26640001 RAL-307_125b 3329 chr3R 26740277 26740321 chr3R 26740397 26740447 21 125 6.5 10.5 8.5 2.2 170 chr3R 26740277 intergenic not near genes chr3R 26740362 intergenic not near genes chr3R 26740447 intergenic not near genes chr3R_21_26740001 chr3R_26740001 RAL-307_125b 3330 chr3R 26755662 26755687 chr3R 26755788 26755813 9 125 11.5 5.0 8.2 1.0 151 chr3R 26755662 intergenic not near genes chr3R 26755738 intergenic not near genes chr3R 26755813 intergenic not near genes chr3R_9_26755001 chr3R_26755001 RAL-307_125b 3331 chr3R 26755688 26755698 chr3R 26755781 26755824 6 114 11.0 5.0 8.0 0.7 136 chr3R 26755688 intergenic not near genes chr3R 26755756 intergenic not near genes chr3R 26755824 intergenic not near genes chr3R_6_26755001 chr3R_26755001 RAL-307_125b 3332 chr3R 26755699 26755723 chr3R 26755774 26755821 13 112 11.5 6.5 9.0 1.3 122 chr3R 26755699 intergenic not near genes chr3R 26755760 intergenic not near genes chr3R 26755821 intergenic not near genes chr3R_13_26755001 chr3R_26755001 RAL-307_125b 3333 chr3R 26810506 26810535 chr3R 26811040 26811070 roo 13 535 14.5 15.5 15.0 0.8 564 chr3R 26810506 intron Tl + chr3R 26810788 intron Tl + chr3R 26811070 intron Tl + chr3R_13_26810001 chr3R_26810001 RAL-307_125b 3334 chr3R 26810536 26810574 chr3R 26811038 26811109 roo 25 533 9.0 15.0 12.0 1.9 573 chr3R 26810536 intron Tl + chr3R 26810822 intron Tl + chr3R 26811109 intron Tl + chr3R_25_26810001 chr3R_26810001 RAL-307_125b 3335 chr3R 27007360 27007436 chr3R 27016545 27016606 roo 31 9181 10.5 13.0 11.8 2.4 9246 chr3R 27007360 intron RYa-R + chr3R 27011983 intron RYa-R + chr3R 27016606 intron RYa-R + chr3R_31_27010001 chr3R_27010001 RAL-307_125b 3336 chr3R 27019466 27019491 chr3R 27019612 27019637 11 145 22.5 14.0 18.2 0.6 171 chr3R 27019466 intron,exon RYa-R +,CG17191 - chr3R 27019552 intron,exon RYa-R +,CG17191 - chr3R 27019637 intron,intron RYa-R +,CG17191 - chr3R_11_27015001 chr3R_27015001 RAL-307_125b 3337 chr3R 27019492 27019536 chr3R 27019608 27019682 25 138 9.5 13.5 11.5 2.0 190 chr3R 27019492 intron,exon RYa-R +,CG17191 - chr3R 27019587 intron,exon RYa-R +,CG17191 - chr3R 27019682 intron,intron RYa-R +,CG17191 - chr3R_25_27015001 chr3R_27015001 RAL-307_125b 3338 chr3R 27024208 27024221 chr3R 27024345 27024358 11 137 25.0 9.5 17.2 0.6 150 chr3R 27024208 intron RYa-R + chr3R 27024283 intron RYa-R + chr3R 27024358 intron RYa-R + chr3R_11_27020001 chr3R_27020001 RAL-307_125b 3339 chr3R 27024222 27024280 chr3R 27024340 27024412 27 131 11.5 9.0 10.2 2.4 190 chr3R 27024222 intron RYa-R + chr3R 27024317 intron RYa-R + chr3R 27024412 intron RYa-R + chr3R_27_27020001 chr3R_27020001 RAL-307_125b 3340 chr3R 27027633 27027697 chr3R 27027767 27027829 17 131 17.0 0.5 8.8 1.7 196 chr3R 27027633 intron RYa-R + chr3R 27027731 intron RYa-R + chr3R 27027829 intron RYa-R + chr3R_17_27025001 chr3R_27025001 RAL-307_125b 3341 chr3R 27028677 27028753 chr3R 27028806 27028882 31 128 10.0 11.0 10.5 2.7 205 chr3R 27028677 exon RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028882 intron RYa-R + chr3R_31_27025001 chr3R_27025001 RAL-307_125b 3342 chr3R 27030171 27030243 chr3R 27030350 27030420 29 175 8.0 0.0 4.0 5.8 249 chr3R 27030171 intron RYa-R + chr3R 27030296 intron RYa-R + chr3R 27030420 intron RYa-R + chr3R_29_27030001 chr3R_27030001 RAL-307_125b 3343 chr3R 27034725 27034800 chr3R 27034859 27034934 26 132 4.0 8.5 6.2 3.6 209 chr3R 27034725 intron RYa-R + chr3R 27034830 intron RYa-R + chr3R 27034934 intron RYa-R + chr3R_26_27030001 chr3R_27030001 RAL-307_125b 3344 chr3R 27071372 27071435 chr3R 27071738 27071801 26 363 5.5 12.0 8.8 2.7 429 chr3R 27071372 intergenic not near genes chr3R 27071586 intergenic not near genes chr3R 27071801 intergenic not near genes chr3R_26_27070001 chr3R_27070001 RAL-307_125b 3345 chr3R 27101505 27101509 chr3R 27101658 27101665 4 155 14.5 10.0 12.2 0.3 160 chr3R 27101505 exon CG17189 + chr3R 27101585 intron CG17189 + chr3R 27101665 intron CG17189 + chr3R_4_27100001 chr3R_27100001 RAL-307_125b 3346 chr3R 27101511 27101528 chr3R 27101657 27101684 10 153 9.5 10.0 9.8 0.9 173 chr3R 27101511 exon CG17189 + chr3R 27101598 intron CG17189 + chr3R 27101684 exon CG17189 + chr3R_10_27100001 chr3R_27100001 RAL-307_125b 3347 chr3R 27101530 27101564 chr3R 27101655 27101720 12 153 5.0 9.5 7.2 1.5 190 chr3R 27101530 exon CG17189 + chr3R 27101625 intron CG17189 + chr3R 27101720 exon CG17189 + chr3R_12_27100001 chr3R_27100001 RAL-307_125b 3348 chr3R 27140474 27140544 chr3R 27148134 27148162 412 26 7656 7.5 13.0 10.2 2.3 7688 chr3R 27140474 intron CG6051 - chr3R 27144318 intron CG6051 - chr3R 27148162 intron CG6051 - chr3R_26_27140001 chr3R_27140001 RAL-307_125b 3349 chr3R 27221202 27221257 chr3R 27221342 27221397 18 140 13.0 10.0 11.5 1.4 195 chr3R 27221202 intergenic not near genes chr3R 27221300 intergenic not near genes chr3R 27221397 intergenic not near genes chr3R_18_27220001 chr3R_27220001 RAL-307_125b 3350 chr3R 27299683 27299726 chr3R 27299815 27299858 12 130 10.0 14.0 12.0 0.9 175 chr3R 27299683 intron CG3339 - chr3R 27299770 intron CG3339 - chr3R 27299858 intron CG3339 - chr3R_12_27295001 chr3R_27295001 RAL-307_125b 3351 chr3R 27300812 27300877 chr3R 27300954 27301019 25 136 4.0 10.5 7.2 3.0 207 chr3R 27300812 intron CG3339 - chr3R 27300916 intron CG3339 - chr3R 27301019 intron CG3339 - chr3R_25_27300001 chr3R_27300001 RAL-307_125b 3352 chr3R 27303502 27303512 chr3R 27303640 27303650 4 138 17.0 1.5 9.2 0.4 148 chr3R 27303502 intron CG3339 - chr3R 27303576 intron CG3339 - chr3R 27303650 intron CG3339 - chr3R_4_27300001 chr3R_27300001 RAL-307_125b 3353 chr3R 27303519 27303581 chr3R 27303639 27303709 14 125 5.5 0.5 3.0 3.5 190 chr3R 27303519 intron CG3339 - chr3R 27303614 intron CG3339 - chr3R 27303709 intron CG3339 - chr3R_14_27300001 chr3R_27300001 RAL-307_125b 3354 chr3R 27327376 27327457 chr3R 27327505 27327581 22 124 7.5 8.5 8.0 2.4 205 chr3R 27327376 intergenic not near genes chr3R 27327478 intergenic not near genes chr3R 27327581 intergenic not near genes chr3R_22_27325001 chr3R_27325001 RAL-307_125b 3355 chr3R 27329431 27329463 chr3R 27329558 27329590 10 127 18.5 10.5 14.5 0.6 159 chr3R 27329431 intergenic CG3330 - chr3R 27329510 intergenic CG3330 - chr3R 27329590 intergenic CG3330 - chr3R_10_27325001 chr3R_27325001 RAL-307_125b 3356 chr3R 27329470 27329500 chr3R 27329552 27329627 23 123 11.5 10.0 10.8 1.9 157 chr3R 27329470 intergenic CG3330 - chr3R 27329548 intergenic CG3330 - chr3R 27329627 intergenic CG3330 - chr3R_23_27325001 chr3R_27325001 RAL-307_125b 3357 chr3R 27335897 27335951 chr3R 27336028 27336053 18 128 8.0 0.0 4.0 3.6 156 chr3R 27335897 intergenic not near genes chr3R 27335975 intergenic not near genes chr3R 27336053 intergenic not near genes chr3R_18_27335001 chr3R_27335001 RAL-307_125b 3358 chr3R 27342753 27342764 chr3R 27351384 27351395 Tirant 8 8631 22.5 10.5 16.5 0.5 8642 chr3R 27342753 intron CG42534 + chr3R 27347074 intron CG42534 + chr3R 27351395 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-307_125b 3359 chr3R 27342765 27342822 chr3R 27351380 27351453 Tirant 31 8629 10.0 10.5 10.2 2.8 8688 chr3R 27342765 intron CG42534 + chr3R 27347109 intron CG42534 + chr3R 27351453 intron CG42534 + chr3R_31_27345001 chr3R_27345001 RAL-307_125b 3360 chr3R 27426120 27426176 chr3R 27426254 27426287 11 125 2.0 16.0 9.0 1.1 167 chr3R 27426120 intron side - chr3R 27426204 intron side - chr3R 27426287 intron side - chr3R_11_27425001 chr3R_27425001 RAL-307_125b 3361 chr3R 27443358 27443421 chr3R 27443479 27443548 29 125 9.5 11.0 10.2 2.6 190 chr3R 27443358 intergenic not near genes chr3R 27443453 intergenic not near genes chr3R 27443548 intergenic not near genes chr3R_29_27440001 chr3R_27440001 RAL-307_125b 3362 chr3R 27456545 27456571 chr3R 27456695 27456721 11 149 18.0 5.0 11.5 0.9 176 chr3R 27456545 intergenic not near genes chr3R 27456633 intergenic not near genes chr3R 27456721 intergenic not near genes chr3R_11_27455001 chr3R_27455001 RAL-307_125b 3363 chr3R 27456574 27456612 chr3R 27456694 27456761 10 142 8.0 5.0 6.5 1.3 187 chr3R 27456574 intergenic not near genes chr3R 27456668 intergenic not near genes chr3R 27456761 intergenic not near genes chr3R_10_27455001 chr3R_27455001 RAL-307_125b 3364 chr3R 27467010 27467069 chr3R 27467159 27467186 27 146 7.5 8.5 8.0 3.0 176 chr3R 27467010 3` UTR CG13978 + chr3R 27467098 intergenic CG13978 + chr3R 27467186 intergenic CG13978 + chr3R_27_27465001 chr3R_27465001 RAL-307_125b 3365 chr3R 27486801 27486869 chr3R 27486941 27487008 11 138 1.0 5.0 3.0 2.8 207 chr3R 27486801 intergenic not near genes chr3R 27486904 intergenic not near genes chr3R 27487008 intergenic not near genes chr3R_11_27485001 chr3R_27485001 RAL-307_125b 3366 chr3R 27496542 27496601 chr3R 27496697 27496756 22 153 11.5 6.0 8.8 2.2 214 chr3R 27496542 intergenic not near genes chr3R 27496649 intergenic not near genes chr3R 27496756 intergenic not near genes chr3R_22_27495001 chr3R_27495001 RAL-307_125b 3367 chr3R 27521116 27521184 chr3R 27530375 27530416 roo 26 9258 12.0 13.5 12.8 1.9 9300 chr3R 27521116 intron CG12885 + chr3R 27525766 intron CG12885 + chr3R 27530416 intron CG12885 + chr3R_26_27525001 chr3R_27525001 RAL-307_125b 3368 chr3R 27570221 27570239 chr3R 27570356 27570374 5 135 14.0 5.0 9.5 0.5 153 chr3R 27570221 intron wdb - chr3R 27570298 intron wdb - chr3R 27570374 intron wdb - chr3R_5_27570001 chr3R_27570001 RAL-307_125b 3369 chr3R 27570247 27570290 chr3R 27570354 27570409 12 120 6.5 5.0 5.8 1.8 162 chr3R 27570247 intron wdb - chr3R 27570328 intron wdb - chr3R 27570409 intron wdb - chr3R_12_27570001 chr3R_27570001 RAL-307_125b 3370 chr3R 27574075 27574133 chr3R 27574513 27574567 23 439 8.5 6.5 7.5 2.7 492 chr3R 27574075 intron wdb - chr3R 27574321 intron wdb - chr3R 27574567 intron wdb - chr3R_23_27570001 chr3R_27570001 RAL-307_125b 3371 chr3R 27594717 27594731 chr3R 27594822 27594866 7 126 9.5 11.0 10.2 0.6 149 chr3R 27594717 intron CG5639 - chr3R 27594792 intron CG5639 - chr3R 27594866 intron CG5639 - chr3R_7_27590001 chr3R_27590001 RAL-307_125b 3372 chr3R 27594735 27594737 chr3R 27594819 27594872 4 120 9.5 12.0 10.8 0.3 137 chr3R 27594735 intron CG5639 - chr3R 27594804 intron CG5639 - chr3R 27594872 intron CG5639 - chr3R_4_27590001 chr3R_27590001 RAL-307_125b 3373 chr3R 27594738 27594764 chr3R 27594818 27594863 8 104 5.5 11.0 8.2 0.9 125 chr3R 27594738 intron CG5639 - chr3R 27594800 intron CG5639 - chr3R 27594863 intron CG5639 - chr3R_8_27590001 chr3R_27590001 RAL-307_125b 3374 chr3R 27613298 27613313 chr3R 27613427 27613442 5 128 9.5 13.5 11.5 0.4 144 chr3R 27613298 intron Tusp + chr3R 27613370 intron Tusp + chr3R 27613442 intron Tusp + chr3R_5_27610001 chr3R_27610001 RAL-307_125b 3375 chr3R 27613315 27613326 chr3R 27613424 27613444 6 118 8.0 13.5 10.8 0.5 129 chr3R 27613315 intron Tusp + chr3R 27613380 intron Tusp + chr3R 27613444 intron Tusp + chr3R_6_27610001 chr3R_27610001 RAL-307_125b 3376 chr3R 27648551 27648850 chr3R 27648674 27648969 15 119 10.5 0.0 5.2 2.4 418 chr3R 27648551 intron tau - chr3R 27648760 intron tau - chr3R 27648969 intron tau - chr3R_15_27645001 chr3R_27645001 RAL-307_125b 3377 chr3R 27660200 27660218 chr3R 27660331 27660334 4 127 16.5 8.0 12.2 0.3 134 chr3R 27660200 intergenic Mlc1 - chr3R 27660267 intergenic Mlc1 - chr3R 27660334 intergenic Mlc1 - chr3R_4_27660001 chr3R_27660001 RAL-307_125b 3378 chr3R 27706730 27706793 chr3R 27706857 27706918 29 124 17.0 17.5 17.2 1.6 188 chr3R 27706730 5` UTR CG12428 - chr3R 27706824 intergenic CG12428 -,CG12877 + chr3R 27706918 intergenic CG12428 -,CG12877 + chr3R_29_27705001 chr3R_27705001 RAL-307_125b 3379 chr3R 27725533 27725570 chr3R 27731025 27731062 I-element 15 5491 7.0 14.5 10.8 1.3 5529 chr3R 27725533 intergenic not near genes chr3R 27728298 intergenic not near genes chr3R 27731062 intergenic not near genes chr3R_15_27725001 chr3R_27725001 RAL-307_125b 3380 chr3R 27779223 27779284 chr3R 27779353 27779394 17 121 6.0 9.5 7.8 1.9 171 chr3R 27779223 exon CG34353 - chr3R 27779308 intron CG34353 - chr3R 27779394 intron CG34353 - chr3R_17_27775001 chr3R_27775001 RAL-307_125b 3381 chr3R 27791597 27791642 chr3R 27794801 27794845 Rt1c 16 3200 10.0 15.0 12.5 1.2 3248 chr3R 27791597 intron CG34353 - chr3R 27793221 intron CG34353 - chr3R 27794845 intron CG34353 - chr3R_16_27790001 chr3R_27790001 RAL-307_125b 3382 chr3R 27799707 27799777 chr3R 27800135 27800205 30 422 7.5 8.5 8.0 3.3 498 chr3R 27799707 intron CG34353 - chr3R 27799956 intron CG34353 - chr3R 27800205 intron CG34353 - chr3R_30_27795001 chr3R_27795001 RAL-307_125b 3383 chr3R 27840180 27840263 chr3R 27840373 27840446 17 186 0.0 0.0 0.0 17.0 266 chr3R 27840180 intron CG34353 - chr3R 27840313 intron CG34353 - chr3R 27840446 intron CG34353 - chr3R_17_27840001 chr3R_27840001 RAL-307_125b 3384 chr3R 27856718 27856780 chr3R 27858251 27858313 hopper2 32 1529 11.5 11.5 11.5 2.6 1595 chr3R 27856718 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858313 intron CG34353 - chr3R_32_27855001 chr3R_27855001 RAL-307_125b 3385 chr3R 27862917 27862984 chr3R 27868271 27868297 Transpac 25 5345 10.5 10.5 10.5 2.2 5380 chr3R 27862917 intron CG34353 - chr3R 27865607 intron CG34353 - chr3R 27868297 intron CG34353 - chr3R_25_27865001 chr3R_27865001 RAL-307_125b 3386 chr3R 27875660 27875664 chr3R 27882765 27882769 297 4 7105 26.0 13.5 19.8 0.2 7109 chr3R 27875660 intron CG34353 - chr3R 27879214 intron CG34353 - chr3R 27882769 intron CG34353 - chr3R_4_27875001 chr3R_27875001 RAL-307_125b 3387 chr3R 27875666 27875724 chr3R 27882761 27882829 297 29 7102 10.5 12.5 11.5 2.3 7163 chr3R 27875666 intron CG34353 - chr3R 27879248 intron CG34353 - chr3R 27882829 intron CG34353 - chr3R_29_27875001 chr3R_27875001 RAL-307_125b 3388 chr3R 28019541 28019588 chr3R 28019683 28019730 17 140 6.0 0.5 3.2 4.0 189 chr3R 28019541 intergenic not near genes chr3R 28019636 intergenic not near genes chr3R 28019730 intergenic not near genes chr3R_17_28015001 chr3R_28015001 RAL-307_125b 3389 chr3R 28041786 28041861 chr3R 28042040 28042051 26 250 10.0 6.0 8.0 2.9 265 chr3R 28041786 intron CG34362 + chr3R 28041918 intron CG34362 + chr3R 28042051 intron CG34362 + chr3R_26_28040001 chr3R_28040001 RAL-307_125b 3390 chr3R 28068474 28068517 chr3R 28073940 28074009 I-element 11 5487 1.5 4.0 2.8 2.9 5535 chr3R 28068474 intron CG34362 + chr3R 28071242 intron CG34362 + chr3R 28074009 intron CG34362 + chr3R_11_28070001 chr3R_28070001 RAL-307_125b 3391 chr3R 28103292 28103314 chr3R 28103428 28103457 7 136 8.0 4.0 6.0 1.0 165 chr3R 28103292 intergenic not near genes chr3R 28103374 intergenic not near genes chr3R 28103457 intergenic not near genes chr3R_7_28100001 chr3R_28100001 RAL-307_125b 3392 chr3R 28164840 28164908 chr3R 28164968 28165036 13 127 7.5 0.0 3.8 2.7 196 chr3R 28164840 intron CG34354 + chr3R 28164938 intron CG34354 + chr3R 28165036 intron CG34354 + chr3R_13_28160001 chr3R_28160001 RAL-307_125b 3393 chr3R 28173623 28173694 chr3R 28181103 28181174 mdg1 24 7479 9.0 8.5 8.8 2.4 7551 chr3R 28173623 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181174 intron CG34354 + chr3R_24_28175001 chr3R_28175001 RAL-307_125b 3394 chr3R 28253308 28253331 chr3R 28255868 28255891 jockey 6 2556 20.0 15.5 17.8 0.3 2583 chr3R 28253308 intergenic not near genes chr3R 28254600 intergenic not near genes chr3R 28255891 intergenic not near genes chr3R_6_28250001 chr3R_28250001 RAL-307_125b 3395 chr3R 28253334 28253368 chr3R 28255861 28255913 jockey 11 2553 7.0 14.5 10.8 0.9 2579 chr3R 28253334 intergenic not near genes chr3R 28254624 intergenic not near genes chr3R 28255913 intergenic not near genes chr3R_11_28250001 chr3R_28250001 RAL-307_125b 3396 chr3R 28262623 28262680 chr3R 28262749 28262806 20 125 6.0 13.5 9.8 1.9 183 chr3R 28262623 intergenic CG43125 - chr3R 28262714 intergenic CG43125 - chr3R 28262806 exon CG43125 - chr3R_20_28260001 chr3R_28260001 RAL-307_125b 3397 chr3R 28302066 28302121 chr3R 28302555 28302610 jockey 36 488 15.0 16.5 15.8 2.1 544 chr3R 28302066 intergenic not near genes chr3R 28302338 intergenic not near genes chr3R 28302610 intergenic not near genes chr3R_36_28300001 chr3R_28300001 RAL-307_125b 3398 chr3R 28308040 28308065 chr3R 28308166 28308177 7 123 10.0 9.5 9.8 0.6 137 chr3R 28308040 intergenic not near genes chr3R 28308108 intergenic not near genes chr3R 28308177 intergenic not near genes chr3R_7_28305001 chr3R_28305001 RAL-307_125b 3399 chr3R 28352458 28352528 chr3R 28352632 28352692 36 174 5.5 6.0 5.8 5.3 234 chr3R 28352458 exon Or98b + chr3R 28352575 intron Or98b + chr3R 28352692 exon Or98b + chr3R_36_28350001 chr3R_28350001 RAL-307_125b 3400 chr3R 28393651 28393728 chr3R 28393801 28393874 32 149 5.0 11.0 8.0 3.6 223 chr3R 28393651 intergenic not near genes chr3R 28393762 intergenic not near genes chr3R 28393874 intergenic not near genes chr3R_32_28390001 chr3R_28390001 RAL-307_125b 3401 chr3R 28407691 28407725 chr3R 28407813 28407861 10 129 7.5 14.0 10.8 0.8 170 chr3R 28407691 intergenic not near genes chr3R 28407776 intergenic not near genes chr3R 28407861 intergenic not near genes chr3R_10_28405001 chr3R_28405001 RAL-307_125b 3402 chr3R 28424124 28424199 chr3R 28424263 28424338 39 136 8.5 6.0 7.2 4.8 214 chr3R 28424124 intron beat-VI + chr3R 28424231 intron beat-VI + chr3R 28424338 intron beat-VI + chr3R_39_28420001 chr3R_28420001 RAL-307_125b 3403 chr3R 28441943 28442002 chr3R 28442087 28442142 13 141 6.5 8.0 7.2 1.6 199 chr3R 28441943 intron beat-VI + chr3R 28442042 intron beat-VI + chr3R 28442142 intron beat-VI + chr3R_13_28440001 chr3R_28440001 RAL-307_125b 3404 chr3R 28599329 28599398 chr3R 28599526 28599595 17 193 8.0 11.5 9.8 1.6 266 chr3R 28599329 intergenic Noa36 - chr3R 28599462 intergenic Noa36 - chr3R 28599595 intergenic Noa36 - chr3R_17_28595001 chr3R_28595001 RAL-307_125b 3405 chr3R 28667864 28667871 chr3R 28668007 28668012 5 153 34.5 18.5 26.5 0.2 148 chr3R 28667864 intergenic not near genes chr3R 28667938 intergenic not near genes chr3R 28668012 intergenic not near genes chr3R_5_28665001 chr3R_28665001 RAL-307_125b 3406 chr3R 28667872 28667889 chr3R 28668005 28668043 6 141 33.5 18.0 25.8 0.2 171 chr3R 28667872 intergenic not near genes chr3R 28667958 intergenic not near genes chr3R 28668043 intergenic not near genes chr3R_6_28665001 chr3R_28665001 RAL-307_125b 3407 chr3R 28742445 28742511 chr3R 28742571 28742637 36 125 10.5 10.5 10.5 3.1 192 chr3R 28742445 intron AstA-R2 - chr3R 28742541 intron AstA-R2 - chr3R 28742637 intron AstA-R2 - chr3R_36_28740001 chr3R_28740001 RAL-307_125b 3408 chr3R 28758272 28758319 chr3R 28771329 28771375 Stalker4 17 13054 8.5 7.5 8.0 1.9 13103 chr3R 28758272 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_17_28760001 chr3R_28760001 RAL-307_125b 3409 chr3R 28763909 28763922 chr3R 28771402 28771415 Stalker4 9 7493 0.0 25.5 12.8 0.7 7506 chr3R 28763909 intergenic not near genes chr3R 28767662 intergenic not near genes chr3R 28771415 intergenic not near genes chr3R_9_28765001 chr3R_28765001 RAL-307_125b 3410 chr3R 28792857 28792900 chr3R 28797967 28798024 jockey 19 5127 0.5 6.5 3.5 4.2 5167 chr3R 28792857 intergenic not near genes chr3R 28795440 intergenic not near genes chr3R 28798024 intergenic not near genes chr3R_19_28795001 chr3R_28795001 RAL-307_125b 3411 chr3R 21907534 21907534 chr3R 28831801 28831803 37 6924266 31.5 29.0 30.2 1.2 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_37_25365001 chr3R_25365001 RAL-307_125b 3412 chr3R 28922722 28922774 chr3R 28922848 28922900 17 126 12.0 1.0 6.5 2.3 178 chr3R 28922722 3` UTR Doa + chr3R 28922811 intergenic Doa +,CG11828 + chr3R 28922900 intergenic Doa +,CG11828 + chr3R_17_28920001 chr3R_28920001 RAL-307_125b 3413 chr3R 28931958 28932007 chr3R 28933649 28933718 20 1705 41.0 35.0 38.0 0.5 1760 chr3R 28931958 intron CG14521 - chr3R 28932838 intron CG14521 - chr3R 28933718 intron CG14521 - chr3R_20_28930001 chr3R_28930001 RAL-307_125b 3414 chr3R 28938465 28938481 chr3R 28938615 28938631 10 150 24.5 0.0 12.2 0.8 166 chr3R 28938465 intron CG14521 - chr3R 28938548 intron CG14521 - chr3R 28938631 intron CG14521 - chr3R_10_28935001 chr3R_28935001 RAL-307_125b 3415 chr3R 28960484 28960537 chr3R 28960594 28960664 30 133 6.5 12.0 9.2 2.9 180 chr3R 28960484 intron CG14521 - chr3R 28960574 intron CG14521 - chr3R 28960664 intron CG14521 - chr3R_30_28960001 chr3R_28960001 RAL-307_125b 3416 chr3R 28966806 28966821 chr3R 28966976 28966991 4 170 18.0 10.5 14.2 0.3 185 chr3R 28966806 intron CG14521 - chr3R 28966898 intron CG14521 - chr3R 28966991 intron CG14521 - chr3R_4_28965001 chr3R_28965001 RAL-307_125b 3417 chr3R 28966826 28966883 chr3R 28966972 28967053 13 159 4.0 10.5 7.2 1.6 227 chr3R 28966826 intron CG14521 - chr3R 28966940 intron CG14521 - chr3R 28967053 intron CG14521 - chr3R_13_28965001 chr3R_28965001 RAL-307_125b 3418 chr3R 28968371 28968444 chr3R 28968498 28968571 20 126 8.5 8.0 8.2 2.2 200 chr3R 28968371 intron CG14521 - chr3R 28968471 intron CG14521 - chr3R 28968571 intron CG14521 - chr3R_20_28965001 chr3R_28965001 RAL-307_125b 3419 chr3R 28978113 28978155 chr3R 28978261 28978303 20 146 5.5 2.0 3.8 4.2 190 chr3R 28978113 intergenic not near genes chr3R 28978208 intergenic not near genes chr3R 28978303 intergenic not near genes chr3R_20_28975001 chr3R_28975001 RAL-307_125b 3420 chr3R 28985017 28985091 chr3R 28985169 28985245 20 152 5.0 5.0 5.0 3.3 228 chr3R 28985017 intergenic not near genes chr3R 28985131 intergenic not near genes chr3R 28985245 intergenic not near genes chr3R_20_28985001 chr3R_28985001 RAL-307_125b 3421 chr3R 28988949 28989019 chr3R 28989083 28989148 28 130 0.0 2.0 1.0 14.0 199 chr3R 28988949 intergenic not near genes chr3R 28989048 intergenic not near genes chr3R 28989148 intergenic not near genes chr3R_28_28985001 chr3R_28985001 RAL-307_125b 3422 chr3R 28989499 28989556 chr3R 28989645 28989662 11 135 8.0 9.0 8.5 1.2 163 chr3R 28989499 intergenic not near genes chr3R 28989580 intergenic not near genes chr3R 28989662 intergenic not near genes chr3R_11_28985001 chr3R_28985001 RAL-307_125b 3423 chr3R 29030552 29030631 chr3R 29030681 29030760 41 127 10.0 8.5 9.2 4.0 208 chr3R 29030552 3` UTR CG1951 + chr3R 29030656 3` UTR CG1951 + chr3R 29030760 3` UTR CG1951 + chr3R_41_29030001 chr3R_29030001 RAL-307_125b 3424 chr3R 29032698 29032777 chr3R 29032825 29032910 22 126 10.0 8.5 9.2 2.2 212 chr3R 29032698 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032804 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032910 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_22_29030001 chr3R_29030001 RAL-307_125b 3425 chr3R 29046434 29046482 chr3R 29046565 29046576 13 121 6.0 0.5 3.2 3.1 142 chr3R 29046434 3` UTR Pkc98E + chr3R 29046505 3` UTR Pkc98E + chr3R 29046576 3` UTR Pkc98E + chr3R_13_29045001 chr3R_29045001 RAL-307_125b 3426 chr3R 29049125 29049193 chr3R 29049256 29049324 30 129 9.0 8.0 8.5 3.2 199 chr3R 29049125 3` UTR Pkc98E + chr3R 29049224 intergenic Pkc98E +,CG11837 + chr3R 29049324 intergenic CG11837 +,Pkc98E + chr3R_30_29045001 chr3R_29045001 RAL-307_125b 3427 chr3R 29070004 29070077 chr3R 29070135 29070208 43 131 11.0 12.5 11.8 3.4 204 chr3R 29070004 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070208 intron CG11873 + chr3R_43_29070001 chr3R_29070001 RAL-307_125b 3428 chr3R 29072740 29072784 chr3R 29072867 29072910 12 126 10.5 13.5 12.0 0.9 170 chr3R 29072740 intron CG11873 + chr3R 29072825 intron CG11873 + chr3R 29072910 intron CG11873 + chr3R_12_29070001 chr3R_29070001 RAL-307_125b 3429 chr3R 29079341 29079395 chr3R 29080763 29080815 NOF 28 1422 13.5 12.5 13.0 2.0 1474 chr3R 29079341 intron CG11873 + chr3R 29080078 intron CG11873 + chr3R 29080815 intron CG11873 + chr3R_28_29080001 chr3R_29080001 RAL-307_125b 3430 chr3R 29091397 29091436 chr3R 29091535 29091537 14 130 12.0 20.5 16.2 0.8 140 chr3R 29091397 intron CG11873 + chr3R 29091467 intron CG11873 + chr3R 29091537 intron CG11873 + chr3R_14_29090001 chr3R_29090001 RAL-307_125b 3431 chr3R 29168444 29168505 chr3R 29168581 29168643 29 134 9.0 10.0 9.5 2.8 199 chr3R 29168444 intron CG11898 + chr3R 29168544 intron CG11898 + chr3R 29168643 intron CG11898 + chr3R_29_29165001 chr3R_29165001 RAL-307_125b 3432 chr3R 29179627 29179642 chr3R 29180121 29180152 4 506 26.5 21.0 23.8 0.2 525 chr3R 29179627 intron CG14509 - chr3R 29179890 intron CG14509 - chr3R 29180152 intron CG14509 - chr3R_4_29175001 chr3R_29175001 RAL-307_125b 3433 chr3R 29186978 29187036 chr3R 29187141 29187199 4 156 44.0 38.5 41.2 0.1 221 chr3R 29186978 intron CG14509 - chr3R 29187088 intron CG14509 - chr3R 29187199 intron CG14509 - chr3R_4_29185001 chr3R_29185001 RAL-307_125b 3434 chr3R 29213018 29213043 chr3R 29213148 29213160 13 132 18.0 7.0 12.5 1.0 142 chr3R 29213018 intergenic not near genes chr3R 29213089 intergenic not near genes chr3R 29213160 intergenic not near genes chr3R_13_29210001 chr3R_29210001 RAL-307_125b 3435 chr3R 29213045 29213088 chr3R 29213143 29213221 13 130 7.0 6.5 6.8 1.7 176 chr3R 29213045 intergenic not near genes chr3R 29213133 intergenic not near genes chr3R 29213221 intergenic not near genes chr3R_13_29210001 chr3R_29210001 RAL-307_125b 3436 chr3R 29237240 29237531 chr3R 29239285 29239474 21 2022 41.0 11.5 26.2 0.8 2234 chr3R 29237240 exon CG11951 - chr3R 29238357 intron CG11951 - chr3R 29239474 exon CG31427 - chr3R_21_29235001 chr3R_29235001 RAL-307_125b 3437 chr3R 29238727 29238783 chr3R 29238891 29238947 21 159 7.5 9.0 8.2 2.3 220 chr3R 29238727 intergenic CG11951 -,CG31427 - chr3R 29238837 3` UTR CG31427 - chr3R 29238947 3` UTR CG31427 - chr3R_21_29235001 chr3R_29235001 RAL-307_125b 3438 chr3R 29239230 29239242 chr3R 29245520 29245553 5 6317 6.0 28.0 17.0 0.3 6323 chr3R 29239230 exon CG31427 - chr3R 29242392 exon CG31445 - chr3R 29245553 exon SP1029 - chr3R_5_29240001 chr3R_29240001 RAL-307_125b 3439 chr3R 29237522 29237524 chr3R 29239380 29239402 5 1862 39.0 18.5 28.8 0.2 1880 chr3R 29237522 exon CG11951 - chr3R 29238462 intron CG11951 - chr3R 29239402 intron CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-307_125b 3440 chr3R 29240293 29240502 chr3R 29240427 29240636 26 133 8.5 7.5 8.0 2.9 343 chr3R 29240293 intron CG31427 - chr3R 29240464 intergenic CG31427 -,CG31445 - chr3R 29240636 3` UTR CG31445 - chr3R_26_29240001 chr3R_29240001 RAL-307_125b 3441 chr3R 29249871 29249906 chr3R 29250010 29250045 4 139 1.0 10.5 5.8 0.6 174 chr3R 29249871 intron SP1029 - chr3R 29249958 intron SP1029 - chr3R 29250045 intron SP1029 - chr3R_4_29245001 chr3R_29245001 RAL-307_125b 3442 chr3R 29256231 29256237 chr3R 29256361 29256366 4 130 17.0 11.0 14.0 0.3 135 chr3R 29256231 intergenic CG45544 +,stg - chr3R 29256298 intergenic CG45544 +,stg - chr3R 29256366 intergenic CG45544 + chr3R_4_29255001 chr3R_29255001 RAL-307_125b 3443 chr3R 29256242 29256297 chr3R 29256360 29256425 21 121 10.0 11.0 10.5 1.8 183 chr3R 29256242 intergenic CG45544 +,stg - chr3R 29256334 intergenic CG45544 + chr3R 29256425 intergenic CG45544 + chr3R_21_29255001 chr3R_29255001 RAL-307_125b 3444 chr3R 29319778 29319836 chr3R 29320147 29320205 jockey 16 368 7.0 12.5 9.8 1.5 427 chr3R 29319778 intergenic Cnx99A - chr3R 29319992 intergenic Cnx99A - chr3R 29320205 intergenic not near genes chr3R_16_29315001 chr3R_29315001 RAL-307_125b 3445 chr3R 29335353 29335363 chr3R 29335534 29335555 4 188 15.0 11.5 13.2 0.3 202 chr3R 29335353 intergenic not near genes chr3R 29335454 intergenic not near genes chr3R 29335555 intergenic not near genes chr3R_4_29335001 chr3R_29335001 RAL-307_125b 3446 chr3R 29335369 29335414 chr3R 29335531 29335573 17 182 6.5 10.0 8.2 1.8 204 chr3R 29335369 intergenic not near genes chr3R 29335471 intergenic not near genes chr3R 29335573 intergenic not near genes chr3R_17_29335001 chr3R_29335001 RAL-307_125b 3447 chr3R 29344082 29344138 chr3R 29344304 29344376 16 232 9.0 11.0 10.0 1.5 294 chr3R 29344082 intergenic not near genes chr3R 29344229 intergenic not near genes chr3R 29344376 intergenic not near genes chr3R_16_29340001 chr3R_29340001 RAL-307_125b 3448 chr3R 29355998 29356079 chr3R 29356128 29356210 33 127 4.5 10.5 7.5 3.9 212 chr3R 29355998 intergenic CR45547 - chr3R 29356104 intergenic CR45547 - chr3R 29356210 3` UTR CR45547 - chr3R_33_29355001 chr3R_29355001 RAL-307_125b 3449 chr3R 29365338 29365406 chr3R 29365470 29365514 27 127 12.0 9.0 10.5 2.3 176 chr3R 29365338 intergenic not near genes chr3R 29365426 intergenic not near genes chr3R 29365514 intergenic not near genes chr3R_27_29365001 chr3R_29365001 RAL-307_125b 3450 chr3R 29376312 29376362 chr3R 29376450 29376500 25 138 8.0 0.0 4.0 5.0 188 chr3R 29376312 intergenic not near genes chr3R 29376406 intergenic not near genes chr3R 29376500 intergenic not near genes chr3R_25_29375001 chr3R_29375001 RAL-307_125b 3451 chr3R 29384146 29384191 chr3R 29384260 29384305 19 117 9.0 6.0 7.5 2.2 159 chr3R 29384146 intron Ptp99A + chr3R 29384226 intron Ptp99A + chr3R 29384305 intron Ptp99A + chr3R_19_29380001 chr3R_29380001 RAL-307_125b 3452 chr3R 29402931 29403006 chr3R 29403076 29403151 40 143 9.5 8.0 8.8 4.1 220 chr3R 29402931 intron Ptp99A + chr3R 29403041 intron Ptp99A + chr3R 29403151 intron Ptp99A + chr3R_40_29400001 chr3R_29400001 RAL-307_125b 3453 chr3R 29406582 29406629 chr3R 29407913 29407965 jockey 26 1329 12.0 9.0 10.5 2.3 1383 chr3R 29406582 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407965 intron Ptp99A + chr3R_26_29405001 chr3R_29405001 RAL-307_125b 3454 chr3R 29406630 29406643 chr3R 29407906 29407932 jockey 5 1297 9.5 7.5 8.5 0.5 1302 chr3R 29406630 intron Ptp99A + chr3R 29407281 intron Ptp99A + chr3R 29407932 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-307_125b 3455 chr3R 29420060 29420086 chr3R 29420194 29420224 10 138 7.0 1.5 4.2 1.9 164 chr3R 29420060 intron Ptp99A + chr3R 29420142 intron Ptp99A + chr3R 29420224 intron Ptp99A + chr3R_10_29420001 chr3R_29420001 RAL-307_125b 3456 chr3R 29435055 29435099 chr3R 29435149 29435175 4 103 4.5 6.5 5.5 0.6 120 chr3R 29435055 intron Ptp99A + chr3R 29435115 intron Ptp99A + chr3R 29435175 intron Ptp99A + chr3R_4_29435001 chr3R_29435001 RAL-307_125b 3457 chr3R 29445302 29445350 chr3R 29445430 29445463 14 121 17.5 7.0 12.2 1.1 161 chr3R 29445302 intron Ptp99A + chr3R 29445382 intron Ptp99A + chr3R 29445463 intron Ptp99A + chr3R_14_29445001 chr3R_29445001 RAL-307_125b 3458 chr3R 29453690 29453781 chr3R 29453831 29453897 18 131 3.0 16.5 9.8 1.7 207 chr3R 29453690 intron Ptp99A + chr3R 29453794 intron Ptp99A + chr3R 29453897 intron Ptp99A + chr3R_18_29450001 chr3R_29450001 RAL-307_125b 3459 chr3R 29454084 29454156 chr3R 29454759 29454831 21 671 5.5 6.0 5.8 3.1 747 chr3R 29454084 intron Ptp99A + chr3R 29454458 intron Ptp99A + chr3R 29454831 intron Ptp99A + chr3R_21_29450001 chr3R_29450001 RAL-307_125b 3460 chr3R 29471974 29472030 chr3R 29472103 29472173 8 124 5.5 3.5 4.5 1.5 199 chr3R 29471974 intron Ptp99A + chr3R 29472074 intron Ptp99A + chr3R 29472173 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-307_125b 3461 chr3R 29474389 29474458 chr3R 29474526 29474595 39 133 12.5 15.0 13.8 2.6 206 chr3R 29474389 intron Ptp99A + chr3R 29474492 intron Ptp99A + chr3R 29474595 intron Ptp99A + chr3R_39_29470001 chr3R_29470001 RAL-307_125b 3462 chr3R 29505842 29505923 chr3R 29505969 29506050 31 126 11.0 8.5 9.8 2.9 208 chr3R 29505842 intergenic not near genes chr3R 29505946 intergenic not near genes chr3R 29506050 intergenic not near genes chr3R_31_29505001 chr3R_29505001 RAL-307_125b 3463 chr3R 29508832 29508839 chr3R 29509004 29509011 4 172 0.0 8.0 4.0 0.8 179 chr3R 29508832 intergenic not near genes chr3R 29508922 intergenic not near genes chr3R 29509011 intergenic not near genes chr3R_4_29505001 chr3R_29505001 RAL-307_125b 3464 chr3R 29539385 29539392 chr3R 29539511 29539518 4 126 20.0 0.0 10.0 0.4 133 chr3R 29539385 intergenic not near genes chr3R 29539452 intergenic not near genes chr3R 29539518 intergenic not near genes chr3R_4_29535001 chr3R_29535001 RAL-307_125b 3465 chr3R 29539396 29539451 chr3R 29539507 29539511 12 118 6.5 1.0 3.8 2.5 115 chr3R 29539396 intergenic not near genes chr3R 29539454 intergenic not near genes chr3R 29539511 intergenic not near genes chr3R_12_29535001 chr3R_29535001 RAL-307_125b 3466 chr3R 29546709 29546765 chr3R 29546835 29546860 27 121 16.5 12.0 14.2 1.8 151 chr3R 29546709 intergenic not near genes chr3R 29546784 intergenic not near genes chr3R 29546860 intergenic not near genes chr3R_27_29545001 chr3R_29545001 RAL-307_125b 3467 chr3R 29546769 29546776 chr3R 29546830 29546887 4 97 13.0 12.5 12.8 0.3 118 chr3R 29546769 intergenic not near genes chr3R 29546828 intergenic not near genes chr3R 29546887 intergenic not near genes chr3R_4_29545001 chr3R_29545001 RAL-307_125b 3468 chr3R 29550210 29550223 chr3R 29550341 29550349 5 127 19.5 9.0 14.2 0.3 139 chr3R 29550210 intergenic not near genes chr3R 29550280 intergenic not near genes chr3R 29550349 intergenic not near genes chr3R_5_29550001 chr3R_29550001 RAL-307_125b 3469 chr3R 29563975 29563997 chr3R 29564101 29564123 11 126 0.0 10.5 5.2 1.8 148 chr3R 29563975 intron Dr + chr3R 29564049 intron Dr + chr3R 29564123 intron Dr + chr3R_11_29560001 chr3R_29560001 RAL-307_125b 3470 chr3R 29624915 29624990 chr3R 29625037 29625111 10 115 12.0 10.5 11.2 0.8 196 chr3R 29624915 intergenic not near genes chr3R 29625013 intergenic not near genes chr3R 29625111 intergenic not near genes chr3R_10_29625001 chr3R_29625001 RAL-307_125b 3471 chr3R 29631484 29631554 chr3R 29631612 29631686 29 128 0.0 8.0 4.0 5.8 202 chr3R 29631484 3` UTR Dop1R2 - chr3R 29631585 3` UTR Dop1R2 - chr3R 29631686 3` UTR Dop1R2 - chr3R_29_29630001 chr3R_29630001 RAL-307_125b 3472 chr3R 29738223 29738235 chr3R 29739740 29739752 hobo 5 1517 26.5 12.0 19.2 0.2 1529 chr3R 29738223 intergenic CG1969 +,CG7598 + chr3R 29738988 intron CG1969 + chr3R 29739752 5` UTR CG1969 + chr3R_5_29735001 chr3R_29735001 RAL-307_125b 3473 chr3R 29738240 29738298 chr3R 29739734 29739771 hobo 22 1511 12.0 11.5 11.8 1.7 1531 chr3R 29738240 intergenic CG1969 +,CG7598 + chr3R 29739006 intron CG1969 + chr3R 29739771 5` UTR CG1969 + chr3R_22_29735001 chr3R_29735001 RAL-307_125b 3474 chr3R 29754915 29754988 chr3R 29755043 29755115 19 128 5.5 7.0 6.2 2.6 200 chr3R 29754915 intergenic CR44953 -,yata + chr3R 29755015 intergenic CR44953 -,yata + chr3R 29755115 intergenic CR44953 - chr3R_19_29755001 chr3R_29755001 RAL-307_125b 3475 chr3R 29758896 29758967 chr3R 29759024 29759095 35 125 12.0 12.0 12.0 2.7 199 chr3R 29758896 3` UTR CR44953 - chr3R 29758996 3` UTR CR44953 - chr3R 29759095 intergenic CR44953 - chr3R_35_29755001 chr3R_29755001 RAL-307_125b 3476 chr3R 29760314 29760383 chr3R 29761565 29761632 pogo 35 1251 11.5 10.5 11.0 2.9 1318 chr3R 29760314 intergenic not near genes chr3R 29760973 intergenic not near genes chr3R 29761632 intergenic not near genes chr3R_35_29760001 chr3R_29760001 RAL-307_125b 3477 chr3R 29880962 29881034 chr3R 29881097 29881170 30 134 10.5 9.5 10.0 2.7 208 chr3R 29880962 intron CG31038 + chr3R 29881066 intron CG31038 + chr3R 29881170 intron CG31038 + chr3R_30_29880001 chr3R_29880001 RAL-307_125b 3478 chr3R 29881978 29882044 chr3R 29891184 29891250 roo 24 9206 15.5 11.0 13.2 1.7 9272 chr3R 29881978 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891250 intron CG31038 + chr3R_24_29885001 chr3R_29885001 RAL-307_125b 3479 chr3R 29950526 29950599 chr3R 29950653 29950696 19 105 4.5 7.5 6.0 2.7 170 chr3R 29950526 intergenic TkR99D - chr3R 29950611 intergenic TkR99D - chr3R 29950696 intergenic TkR99D - chr3R_19_29950001 chr3R_29950001 RAL-307_125b 3480 chr3R 29963431 29963512 chr3R 29963579 29963637 8 137 4.0 0.5 2.2 2.5 206 chr3R 29963431 intron TkR99D - chr3R 29963534 intron TkR99D - chr3R 29963637 intron TkR99D - chr3R_8_29960001 chr3R_29960001 RAL-307_125b 3481 chr3R 29966019 29966065 chr3R 29966146 29966192 7 126 7.5 18.5 13.0 0.5 173 chr3R 29966019 intron TkR99D - chr3R 29966106 intron TkR99D - chr3R 29966192 intron TkR99D - chr3R_7_29965001 chr3R_29965001 RAL-307_125b 3482 chr3R 29976531 29976556 chr3R 29976771 29976804 9 242 6.0 9.5 7.8 1.0 273 chr3R 29976531 intergenic not near genes chr3R 29976668 intergenic not near genes chr3R 29976804 intergenic not near genes chr3R_9_29975001 chr3R_29975001 RAL-307_125b 3483 chr3R 30032117 30032130 chr3R 30032246 30032259 6 129 25.5 13.0 19.2 0.3 142 chr3R 30032117 intron Axn + chr3R 30032188 intron Axn + chr3R 30032259 intron Axn + chr3R_6_30030001 chr3R_30030001 RAL-307_125b 3484 chr3R 30069956 30070008 chr3R 30070108 30070159 20 151 6.5 12.0 9.2 2.0 203 chr3R 30069956 intron sima + chr3R 30070058 intron sima + chr3R 30070159 intron sima + chr3R_20_30070001 chr3R_30070001 RAL-307_125b 3485 chr3R 30084813 30084874 chr3R 30086324 30086391 hobo 15 1509 7.0 10.5 8.8 1.5 1578 chr3R 30084813 intron sima + chr3R 30085602 intron sima + chr3R 30086391 intron sima + chr3R_15_30085001 chr3R_30085001 RAL-307_125b 3486 chr3R 30147807 30147873 chr3R 30147938 30148009 31 134 2.0 10.0 6.0 4.4 202 chr3R 30147807 intron AdoR - chr3R 30147908 intron AdoR - chr3R 30148009 intron AdoR - chr3R_31_30145001 chr3R_30145001 RAL-307_125b 3487 chr3R 30182712 30182778 chr3R 30182901 30182967 25 185 7.5 11.5 9.5 2.4 255 chr3R 30182712 intergenic not near genes chr3R 30182840 intergenic not near genes chr3R 30182967 intergenic not near genes chr3R_25_30180001 chr3R_30180001 RAL-307_125b 3488 chr3R 30203340 30203378 chr3R 30203469 30203505 10 125 5.0 4.0 4.5 1.8 165 chr3R 30203340 intergenic CG9743 - chr3R 30203422 intergenic CG9743 - chr3R 30203505 intergenic not near genes chr3R_10_30200001 chr3R_30200001 RAL-307_125b 3489 chr3R 30210515 30210673 chr3R 30210661 30210803 19 140 1.0 0.0 0.5 12.7 288 chr3R 30210515 intergenic Anp +,CecA1 + chr3R 30210659 intergenic CecA1 +,Anp + chr3R 30210803 intergenic CecA1 +,Anp + chr3R_19_30210001 chr3R_30210001 RAL-307_125b 3490 chr3R 30225699 30225711 chr3R 30225825 30225837 9 126 6.0 4.5 5.2 1.5 138 chr3R 30225699 intergenic not near genes chr3R 30225768 intergenic not near genes chr3R 30225837 intergenic not near genes chr3R_9_30225001 chr3R_30225001 RAL-307_125b 3491 chr3R 30238723 30238788 chr3R 30239937 30240001 1360 36 1211 12.5 19.5 16.0 2.1 1278 chr3R 30238723 intergenic not near genes chr3R 30239362 intergenic not near genes chr3R 30240001 intergenic not near genes chr3R_36_30235001 chr3R_30235001 RAL-307_125b 3492 chr3R 30246303 30246335 chr3R 30246420 30246464 7 127 0.5 15.0 7.8 0.8 161 chr3R 30246303 intron CG9733 - chr3R 30246384 intron CG9733 - chr3R 30246464 intron CG9733 - chr3R_7_30245001 chr3R_30245001 RAL-307_125b 3493 chr3R 30260322 30260389 chr3R 30260443 30260515 34 125 12.0 7.0 9.5 3.2 193 chr3R 30260322 intergenic not near genes chr3R 30260418 intergenic not near genes chr3R 30260515 intergenic not near genes chr3R_34_30260001 chr3R_30260001 RAL-307_125b 3494 chr3R 30262553 30262594 chr3R 30262700 30262741 7 147 0.5 7.5 4.0 1.4 188 chr3R 30262553 intergenic not near genes chr3R 30262647 intergenic not near genes chr3R 30262741 intergenic not near genes chr3R_7_30260001 chr3R_30260001 RAL-307_125b 3495 chr3R 30264447 30264505 chr3R 30264666 30264740 18 228 1.5 2.0 1.8 6.4 293 chr3R 30264447 intergenic not near genes chr3R 30264594 intergenic not near genes chr3R 30264740 intergenic not near genes chr3R_18_30260001 chr3R_30260001 RAL-307_125b 3496 chr3R 30268198 30268271 chr3R 30268327 30268399 31 126 5.0 4.5 4.8 5.3 201 chr3R 30268198 intergenic not near genes chr3R 30268298 intergenic not near genes chr3R 30268399 intergenic not near genes chr3R_31_30265001 chr3R_30265001 RAL-307_125b 3497 chr3R 30287724 30287774 chr3R 30287857 30287907 12 127 16.5 1.5 9.0 1.2 183 chr3R 30287724 intron hdc + chr3R 30287816 intron hdc + chr3R 30287907 intron hdc + chr3R_12_30285001 chr3R_30285001 RAL-307_125b 3498 chr3R 30317334 30317340 chr3R 30324961 30324982 roo 6 7638 0.0 11.5 5.8 0.9 7648 chr3R 30317334 intron hdc + chr3R 30321158 intron hdc + chr3R 30324982 intron hdc + chr3R_6_30320001 chr3R_30320001 RAL-307_125b 3499 chr3R 30346979 30347034 chr3R 30347116 30347170 15 132 13.5 9.0 11.2 1.2 191 chr3R 30346979 intron hdc + chr3R 30347074 intron hdc + chr3R 30347170 intron hdc + chr3R_15_30345001 chr3R_30345001 RAL-307_125b 3500 chr3R 30375502 30375565 chr3R 30383175 30383238 412 9 7672 4.5 5.0 4.8 1.6 7736 chr3R 30375502 intergenic not near genes chr3R 30379370 intergenic not near genes chr3R 30383238 intergenic not near genes chr3R_9_30375001 chr3R_30375001 RAL-307_125b 3501 chr3R 30396148 30396229 chr3R 30404483 30404545 roo 37 8334 5.0 6.5 5.8 5.4 8397 chr3R 30396148 intergenic not near genes chr3R 30400346 intergenic not near genes chr3R 30404545 5` UTR CR45570 + chr3R_37_30400001 chr3R_30400001 RAL-307_125b 3502 chr3R 30413029 30413093 chr3R 30413141 30413204 25 120 13.0 12.0 12.5 1.9 175 chr3R 30413029 intergenic not near genes chr3R 30413116 intergenic not near genes chr3R 30413204 intergenic not near genes chr3R_25_30410001 chr3R_30410001 RAL-307_125b 3503 chr3R 30422915 30422922 chr3R 30423063 30423070 4 148 6.5 11.0 8.8 0.4 155 chr3R 30422915 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30422992 intergenic CG2217 -,CG42740 -,CG15535 - chr3R 30423070 3` UTR CG15535 - chr3R_4_30420001 chr3R_30420001 RAL-307_125b 3504 chr3R 30422923 30422974 chr3R 30423041 30423121 9 133 3.0 8.0 5.5 1.4 198 chr3R 30422923 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30423022 intergenic CG15535 -,CG2217 -,CG42740 - chr3R 30423121 3` UTR CG15535 - chr3R_9_30420001 chr3R_30420001 RAL-307_125b 3505 chr3R 30426913 30426963 chr3R 30427037 30427041 13 125 14.0 1.5 7.8 1.5 128 chr3R 30426913 intron CG2218 - chr3R 30426977 intron CG2218 - chr3R 30427041 intron CG2218 - chr3R_13_30425001 chr3R_30425001 RAL-307_125b 3506 chr3R 30445467 30445532 chr3R 30445609 30445619 35 139 11.0 10.5 10.8 3.0 152 chr3R 30445467 intergenic aralar1 -,Osi23 - chr3R 30445543 intergenic aralar1 -,Osi23 - chr3R 30445619 intergenic aralar1 - chr3R_35_30445001 chr3R_30445001 RAL-307_125b 3507 chr3R 30448059 30448137 chr3R 30448187 30448265 20 127 10.5 0.5 5.5 3.1 206 chr3R 30448059 intron aralar1 - chr3R 30448162 intron aralar1 - chr3R 30448265 intron aralar1 - chr3R_20_30445001 chr3R_30445001 RAL-307_125b 3508 chr3R 30456349 30456425 chr3R 30456479 30456519 38 126 6.5 11.0 8.8 3.9 170 chr3R 30456349 intergenic CG2224 -,aralar1 - chr3R 30456434 intergenic CG2224 - chr3R 30456519 3` UTR CG2224 - chr3R_38_30455001 chr3R_30455001 RAL-307_125b 3509 chr3R 30461453 30461469 chr3R 30461620 30461636 8 167 14.5 11.5 13.0 0.6 183 chr3R 30461453 intron CDase + chr3R 30461544 intron CDase + chr3R 30461636 intron CDase + chr3R_8_30460001 chr3R_30460001 RAL-307_125b 3510 chr3R 30461472 30461522 chr3R 30461608 30461689 16 165 8.0 8.5 8.2 1.7 217 chr3R 30461472 intron CDase + chr3R 30461580 intron CDase + chr3R 30461689 intron CDase + chr3R_16_30460001 chr3R_30460001 RAL-307_125b 3511 chr3R 30480445 30480500 chr3R 30482946 30483018 jockey 16 2507 5.5 2.0 3.8 3.3 2573 chr3R 30480445 intron PH4alphaEFB + chr3R 30481732 intron PH4alphaEFB + chr3R 30483018 intron PH4alphaEFB + chr3R_16_30480001 chr3R_30480001 RAL-307_125b 3512 chr3R 30488073 30488091 chr3R 30488202 30488220 11 129 19.5 0.5 10.0 1.0 147 chr3R 30488073 intergenic Jon99Fii - chr3R 30488146 intergenic Jon99Fii - chr3R 30488220 intergenic Jon99Fii - chr3R_11_30485001 chr3R_30485001 RAL-307_125b 3513 chr3R 30498343 30498428 chr3R 30498605 30498678 25 249 0.0 7.0 3.5 5.6 335 chr3R 30498343 intron PH4alphaNE1 - chr3R 30498510 intron PH4alphaNE1 - chr3R 30498678 intron PH4alphaNE1 - chr3R_25_30495001 chr3R_30495001 RAL-307_125b 3514 chr3R 30538479 30538542 chr3R 30540522 30540585 28 2044 51.5 40.5 46.0 0.6 2106 chr3R 30538479 intron tmod + chr3R 30539532 intron tmod + chr3R 30540585 intron tmod + chr3R_28_30535001 chr3R_30535001 RAL-307_125b 3515 chr3R 30548269 30548327 chr3R 30548397 30548455 13 123 9.0 9.5 9.2 1.3 186 chr3R 30548269 intron tmod + chr3R 30548362 intron tmod + chr3R 30548455 intron tmod + chr3R_13_30545001 chr3R_30545001 RAL-307_125b 3516 chr3R 30564276 30564351 chr3R 30564409 30564474 20 124 3.0 12.5 7.8 2.3 198 chr3R 30564276 intron tmod + chr3R 30564375 intron tmod + chr3R 30564474 intron tmod + chr3R_20_30560001 chr3R_30560001 RAL-307_125b 3517 chr3R 30627567 30627574 chr3R 30627697 30627703 4 130 12.0 6.5 9.2 0.4 136 chr3R 30627567 3` UTR CG2267 - chr3R 30627635 exon CG2267 - chr3R 30627703 exon CG2267 - chr3R_4_30625001 chr3R_30625001 RAL-307_125b 3518 chr3R 30627577 30627590 chr3R 30627690 30627720 6 115 10.5 6.0 8.2 0.7 143 chr3R 30627577 3` UTR CG2267 - chr3R 30627648 exon CG2267 - chr3R 30627720 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-307_125b 3519 chr3R 30627592 30627628 chr3R 30627689 30627746 13 112 6.5 6.0 6.2 1.8 154 chr3R 30627592 3` UTR CG2267 - chr3R 30627669 exon CG2267 - chr3R 30627746 exon CG2267 - chr3R_13_30625001 chr3R_30625001 RAL-307_125b 3520 chr3R 30679475 30679551 chr3R 30686994 30687070 blood 38 7517 6.0 4.5 5.2 6.1 7595 chr3R 30679475 intergenic not near genes chr3R 30683272 intergenic not near genes chr3R 30687070 intergenic not near genes chr3R_38_30680001 chr3R_30680001 RAL-307_125b 3521 chr3R 30689487 30689546 chr3R 30689604 30689675 37 127 11.0 18.5 14.8 2.3 188 chr3R 30689487 intergenic not near genes chr3R 30689581 intergenic not near genes chr3R 30689675 intergenic not near genes chr3R_37_30685001 chr3R_30685001 RAL-307_125b 3522 chr3R 30700838 30700863 chr3R 30701009 30701016 8 170 4.5 0.5 2.5 2.3 178 chr3R 30700838 intergenic not near genes chr3R 30700927 intergenic not near genes chr3R 30701016 intergenic not near genes chr3R_8_30700001 chr3R_30700001 RAL-307_125b 3523 chr3R 30761306 30761364 chr3R 30761437 30761495 15 132 6.5 10.5 8.5 1.6 189 chr3R 30761306 intergenic not near genes chr3R 30761400 intergenic not near genes chr3R 30761495 intergenic not near genes chr3R_15_30760001 chr3R_30760001 RAL-307_125b 3524 chr3R 30795874 30795931 chr3R 30796242 30796299 29 364 8.5 7.0 7.8 3.3 425 chr3R 30795874 intron wts - chr3R 30796086 intron wts - chr3R 30796299 intron wts - chr3R_29_30795001 chr3R_30795001 RAL-307_125b 3525 chr3R 30801434 30801478 chr3R 30801581 30801641 8 148 7.0 3.5 5.2 1.3 207 chr3R 30801434 intron wts - chr3R 30801538 intron wts - chr3R 30801641 intron wts - chr3R_8_30800001 chr3R_30800001 RAL-307_125b 3526 chr3R 30818767 30818839 chr3R 30820382 30820429 1360 41 1613 4.0 14.5 9.2 4.0 1662 chr3R 30818767 intron cindr + chr3R 30819598 intron cindr + chr3R 30820429 intron cindr + chr3R_41_30815001 chr3R_30815001 RAL-307_125b 3527 chr3R 30831665 30831697 chr3R 30831791 30831823 7 123 9.0 18.5 13.8 0.5 158 chr3R 30831665 intron CG15544 + chr3R 30831744 intron CG15544 + chr3R 30831823 intron CG15544 + chr3R_7_30830001 chr3R_30830001 RAL-307_125b 3528 chr3R 30855798 30855803 chr3R 30855925 30855930 4 127 3.0 9.5 6.2 0.6 132 chr3R 30855798 intergenic not near genes chr3R 30855864 intergenic not near genes chr3R 30855930 intergenic not near genes chr3R_4_30855001 chr3R_30855001 RAL-307_125b 3529 chr3R 30859356 30859427 chr3R 30859484 30859555 36 127 12.0 9.0 10.5 3.1 199 chr3R 30859356 intergenic not near genes chr3R 30859456 intergenic not near genes chr3R 30859555 intergenic not near genes chr3R_36_30855001 chr3R_30855001 RAL-307_125b 3530 chr3R 30900480 30900508 chr3R 30900610 30900638 10 129 11.0 9.0 10.0 0.9 158 chr3R 30900480 exon Cyp4c3 + chr3R 30900559 3` UTR Cyp4c3 + chr3R 30900638 3` UTR Cyp4c3 + chr3R_10_30900001 chr3R_30900001 RAL-307_125b 3531 chr3R 30900510 30900528 chr3R 30900605 30900658 8 118 9.0 9.0 9.0 0.8 148 chr3R 30900510 exon Cyp4c3 + chr3R 30900584 3` UTR Cyp4c3 + chr3R 30900658 3` UTR Cyp4c3 + chr3R_8_30900001 chr3R_30900001 RAL-307_125b 3532 chr3R 30900533 30900547 chr3R 30900602 30900677 11 121 6.5 9.5 8.0 1.2 144 chr3R 30900533 3` UTR Cyp4c3 + chr3R 30900605 3` UTR Cyp4c3 + chr3R 30900677 3` UTR Cyp4c3 + chr3R_11_30900001 chr3R_30900001 RAL-307_125b 3533 chr3R 30914937 30914961 chr3R 30915108 30915131 10 171 13.5 26.5 20.0 0.5 194 chr3R 30914937 intron Ptx1 + chr3R 30915034 intron Ptx1 + chr3R 30915131 intron Ptx1 + chr3R_10_30915001 chr3R_30915001 RAL-307_125b 3534 chr3R 30980799 30980822 chr3R 30980925 30980948 6 126 6.5 9.5 8.0 0.7 149 chr3R 30980799 intron 5-HT7 - chr3R 30980874 intron 5-HT7 - chr3R 30980948 intron 5-HT7 - chr3R_6_30980001 chr3R_30980001 RAL-307_125b 3535 chr3R 30982585 30982628 chr3R 30982686 30982694 10 106 3.5 6.5 5.0 1.7 109 chr3R 30982585 intron 5-HT7 - chr3R 30982640 intron 5-HT7 - chr3R 30982694 intron 5-HT7 - chr3R_10_30980001 chr3R_30980001 RAL-307_125b 3536 chr3R 31047173 31047177 chr3R 31047517 31047521 6 344 26.0 11.0 18.5 0.3 348 chr3R 31047173 intergenic CanA1 + chr3R 31047347 intergenic not near genes chr3R 31047521 intergenic not near genes chr3R_6_31045001 chr3R_31045001 RAL-307_125b 3537 chr3R 31047178 31047210 chr3R 31047514 31047554 9 340 18.5 10.5 14.5 0.6 376 chr3R 31047178 intergenic CanA1 + chr3R 31047366 intergenic not near genes chr3R 31047554 intergenic not near genes chr3R_9_31045001 chr3R_31045001 RAL-307_125b 3538 chr3R 31047211 31047246 chr3R 31047511 31047573 22 338 7.0 10.0 8.5 2.3 362 chr3R 31047211 intergenic CanA1 + chr3R 31047392 intergenic not near genes chr3R 31047573 intergenic not near genes chr3R_22_31045001 chr3R_31045001 RAL-307_125b 3539 chr3R 31047789 31047829 chr3R 31047935 31047975 20 146 14.5 10.0 12.2 1.5 186 chr3R 31047789 intergenic not near genes chr3R 31047882 intergenic not near genes chr3R 31047975 intergenic not near genes chr3R_20_31045001 chr3R_31045001 RAL-307_125b 3540 chr3R 31055478 31055515 chr3R 31055631 31055670 6 153 8.0 11.5 9.8 0.6 192 chr3R 31055478 3` UTR dco - chr3R 31055574 3` UTR dco - chr3R 31055670 3` UTR dco - chr3R_6_31055001 chr3R_31055001 RAL-307_125b 3541 chr3R 31073296 31073346 chr3R 31073427 31073477 16 126 9.0 14.5 11.8 1.2 181 chr3R 31073296 exon Sox100B + chr3R 31073386 intron Sox100B + chr3R 31073477 intron Sox100B + chr3R_16_31070001 chr3R_31070001 RAL-307_125b 3542 chr3R 31074195 31074237 chr3R 31081842 31081885 springer 11 7648 9.5 9.0 9.2 1.1 7690 chr3R 31074195 intron Sox100B + chr3R 31078040 intron Sox100B + chr3R 31081885 intron Sox100B + chr3R_11_31075001 chr3R_31075001 RAL-307_125b 3543 chr3R 31074238 31074252 chr3R 31081840 31081895 springer 5 7638 7.0 8.0 7.5 0.6 7657 chr3R 31074238 intron Sox100B + chr3R 31078066 intron Sox100B + chr3R 31081895 exon Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-307_125b 3544 chr3R 31084855 31084935 chr3R 31084981 31085061 25 125 8.0 6.0 7.0 3.1 206 chr3R 31084855 intergenic not near genes chr3R 31084958 intergenic not near genes chr3R 31085061 intergenic not near genes chr3R_25_31080001 chr3R_31080001 RAL-307_125b 3545 chr3R 31103154 31103188 chr3R 31103305 31103319 10 144 12.5 4.5 8.5 1.1 165 chr3R 31103154 intergenic not near genes chr3R 31103236 intergenic not near genes chr3R 31103319 intergenic not near genes chr3R_10_31100001 chr3R_31100001 RAL-307_125b 3546 chr3R 31103189 31103225 chr3R 31103296 31103347 9 135 6.5 3.5 5.0 1.5 158 chr3R 31103189 intergenic not near genes chr3R 31103268 intergenic not near genes chr3R 31103347 intergenic not near genes chr3R_9_31100001 chr3R_31100001 RAL-307_125b 3547 chr3R 31115037 31115108 chr3R 31115174 31115258 41 144 11.0 0.0 5.5 6.3 221 chr3R 31115037 intergenic not near genes chr3R 31115148 intergenic not near genes chr3R 31115258 intergenic not near genes chr3R_41_31115001 chr3R_31115001 RAL-307_125b 3548 chr3R 31137102 31137185 chr3R 31137235 31137289 36 124 4.0 7.0 5.5 5.5 187 chr3R 31137102 intron Gycbeta100B + chr3R 31137196 intron Gycbeta100B + chr3R 31137289 intron Gycbeta100B + chr3R_36_31135001 chr3R_31135001 RAL-307_125b 3549 chr3R 31156299 31156311 chr3R 31156479 31156491 8 180 19.5 12.5 16.0 0.5 192 chr3R 31156299 intron Gycbeta100B + chr3R 31156395 intron Gycbeta100B + chr3R 31156491 intron Gycbeta100B + chr3R_8_31155001 chr3R_31155001 RAL-307_125b 3550 chr3R 31161368 31161434 chr3R 31161925 31161998 20 556 6.5 6.0 6.2 2.8 630 chr3R 31161368 intron,intron Gycbeta100B +,stops - chr3R 31161683 intron,intron Gycbeta100B +,stops - chr3R 31161998 intron,intron Gycbeta100B +,stops - chr3R_20_31160001 chr3R_31160001 RAL-307_125b 3551 chr3R 31270879 31270928 chr3R 31270980 31271063 7 130 7.0 1.0 4.0 1.4 184 chr3R 31270879 intergenic not near genes chr3R 31270971 intergenic not near genes chr3R 31271063 intergenic not near genes chr3R_7_31270001 chr3R_31270001 RAL-307_125b 3552 chr3R 31279343 31279395 chr3R 31285569 31285610 diver 27 6235 12.0 14.0 13.0 1.9 6267 chr3R 31279343 intergenic not near genes chr3R 31282476 intergenic not near genes chr3R 31285610 intergenic not near genes chr3R_27_31280001 chr3R_31280001 RAL-307_125b 3553 chr3R 31413046 31413106 chr3R 31418296 31418316 copia 9 5236 6.5 0.5 3.5 2.0 5270 chr3R 31413046 intron Gprk2 + chr3R 31415681 intron Gprk2 + chr3R 31418316 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 RAL-307_125b 3554 chr3R 31435316 31435388 chr3R 31435518 31435590 51 200 6.5 10.0 8.2 5.5 274 chr3R 31435316 intron Gprk2 + chr3R 31435453 intron Gprk2 + chr3R 31435590 intron Gprk2 + chr3R_51_31435001 chr3R_31435001 RAL-307_125b 3555 chr3R 31654692 31654746 chr3R 31654843 31654897 12 149 7.5 5.5 6.5 1.6 205 chr3R 31654692 intron kek6 + chr3R 31654794 intron kek6 + chr3R 31654897 intron kek6 + chr3R_12_31650001 chr3R_31650001 RAL-307_125b 3556 chr3R 31691490 31691559 chr3R 31696306 31696333 Doc 25 4809 5.5 10.5 8.0 2.8 4843 chr3R 31691490 intergenic not near genes chr3R 31693912 intergenic not near genes chr3R 31696333 intergenic not near genes chr3R_25_31690001 chr3R_31690001 RAL-307_125b 3557 chr3R 31788432 31788506 chr3R 31788564 31788627 22 130 10.5 6.0 8.2 2.4 195 chr3R 31788432 intron faf + chr3R 31788530 intron faf + chr3R 31788627 intron faf + chr3R_22_31785001 chr3R_31785001 RAL-307_125b 3558 chr3R 31858124 31858206 chr3R 31858274 31858319 20 146 0.0 3.5 1.8 7.1 195 chr3R 31858124 intron heph - chr3R 31858222 intron heph - chr3R 31858319 intron heph - chr3R_20_31855001 chr3R_31855001 RAL-307_125b 3559 chr3R 31858684 31858775 chr3R 31858830 31858911 9 129 0.0 4.5 2.2 2.8 227 chr3R 31858684 intron heph - chr3R 31858798 intron heph - chr3R 31858911 intron heph - chr3R_9_31855001 chr3R_31855001 RAL-307_125b 3560 chr3R 31887529 31887599 chr3R 31887660 31887710 50 130 4.5 10.0 7.2 6.1 181 chr3R 31887529 intron heph - chr3R 31887620 intron heph - chr3R 31887710 intron heph - chr3R_50_31885001 chr3R_31885001 RAL-307_125b 3561 chr3R 31930848 31931144 chr3R 31931009 31931277 21 156 21.0 5.5 13.2 1.5 429 chr3R 31930848 intron heph - chr3R 31931062 intron heph - chr3R 31931277 intron heph - chr3R_21_31930001 chr3R_31930001 RAL-307_125b 3562 chr3R 31931148 31931214 chr3R 31931281 31931347 30 132 8.0 11.0 9.5 2.9 199 chr3R 31931148 intron heph - chr3R 31931248 intron heph - chr3R 31931347 intron heph - chr3R_30_31930001 chr3R_31930001 RAL-307_125b 3563 chr3R 31997946 31998019 chr3R 32005466 32005477 blood 34 7515 9.5 11.5 10.5 3.0 7531 chr3R 31997946 intron heph - chr3R 32001712 intron heph - chr3R 32005477 intron heph - chr3R_34_32000001 chr3R_32000001 RAL-307_125b 3564 chr3R 32009936 32010014 chr3R 32010111 32010184 39 169 10.5 8.0 9.2 3.8 248 chr3R 32009936 intron heph - chr3R 32010060 intron heph - chr3R 32010184 intron heph - chr3R_39_32010001 chr3R_32010001 RAL-307_125b 3565 chr4 76452 76512 chr4 81945 81969 I-element 26 5490 13.5 14.0 13.8 1.8 5517 chr4 76452 intron pan + chr4 79210 intron pan + chr4 81969 intron pan + chr4_26_75001 chr4_75001 RAL-307_125b 3566 chr4 257356 257431 chr4 257576 257651 37 219 13.0 9.0 11.0 3.1 295 chr4 257356 exon RhoGAP102A + chr4 257504 intron RhoGAP102A + chr4 257651 intron RhoGAP102A + chr4_37_255001 chr4_255001 RAL-307_125b 3567 chr4 314462 314525 chr4 314590 314653 15 128 4.0 6.5 5.2 2.4 191 chr4 314462 intergenic Zip102B -,CG32850 + chr4 314558 intergenic CG32850 +,Zip102B - chr4 314653 intergenic CG32850 + chr4_15_310001 chr4_310001 RAL-307_125b 3568 chr4 319947 320000 chr4 328173 328226 Stalker2 14 8224 8.5 5.0 6.8 1.8 8279 chr4 319947 3` UTR CG32850 + chr4 324086 intron CG32850 + chr4 328226 3` UTR,3` UTR CG32850 +,PMCA - chr4_14_320001 chr4_320001 RAL-307_125b 3569 chr4 368653 368693 chr4 368835 368875 11 182 12.5 10.0 11.2 0.9 222 chr4 368653 intron Hcf + chr4 368764 intron Hcf + chr4 368875 intron Hcf + chr4_11_365001 chr4_365001 RAL-307_125b 3570 chr4 671561 671590 chr4 680194 680208 Tirant 12 8632 24.5 15.5 20.0 0.6 8647 chr4 671561 intron CG11360 + chr4 675884 intron CG11360 + chr4 680208 intron CG11360 + chr4_12_675001 chr4_675001 RAL-307_125b 3571 chr4 671591 671609 chr4 680193 680242 Tirant 7 8628 20.5 15.0 17.8 0.4 8651 chr4 671591 intron CG11360 + chr4 675916 intron CG11360 + chr4 680242 intron CG11360 + chr4_7_675001 chr4_675001 RAL-307_125b 3572 chr4 671611 671627 chr4 680187 680260 Tirant 11 8625 15.0 14.0 14.5 0.7 8649 chr4 671611 intron CG11360 + chr4 675936 intron CG11360 + chr4 680260 intron CG11360 + chr4_11_675001 chr4_675001 RAL-307_125b 3573 chr4 694859 694934 chr4 694990 695065 38 129 11.5 8.5 10.0 3.5 206 chr4 694859 intron myo - chr4 694962 intron myo - chr4 695065 intron myo - chr4_38_690001 chr4_690001 RAL-307_125b 3574 chr4 706627 706668 chr4 706810 706851 17 183 68.5 64.5 66.5 0.3 224 chr4 706627 intron ey + chr4 706739 intron ey + chr4 706851 intron ey + chr4_17_705001 chr4_705001 RAL-307_125b 3575 chr4 769760 769777 chr4 769936 769953 INE-1 9 175 19.0 13.0 16.0 0.5 193 chr4 769760 intron bt + chr4 769856 intron bt + chr4 769953 intron bt + chr4_9_765001 chr4_765001 RAL-307_125b 3576 chr4 959580 959652 chr4 959809 959816 32 224 6.0 12.5 9.2 3.1 236 chr4 959580 intergenic CR44030 +,CR45201 - chr4 959698 5` UTR CR44030 + chr4 959816 5` UTR CR44030 + chr4_32_955001 chr4_955001 RAL-307_125b 3577 chrX 288607 288677 chrX 288750 288772 25 142 9.0 7.5 8.2 2.7 165 chrX 288607 intron,intron CG3777 +,CG13375 - chrX 288690 intron,intron CG3777 +,CG13375 - chrX 288772 intron,intron CG3777 +,CG13375 - chrX_25_285001 chrX_285001 RAL-307_125b 3578 chrX 295810 295881 chrX 303480 303545 412 32 7667 7.5 7.0 7.2 3.9 7735 chrX 295810 intron CG3777 + chrX 299678 intron CG3777 + chrX 303545 intron CG3777 + chrX_32_295001 chrX_295001 RAL-307_125b 3579 chrX 318436 318487 chrX 323572 323621 flea 18 5134 16.0 14.5 15.2 1.1 5185 chrX 318436 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323621 intron,intron CG3777 +,CG32816 - chrX_18_320001 chrX_320001 RAL-307_125b 3580 chrX 388771 388790 chrX 390342 390365 7 1580 49.0 36.5 42.8 0.2 1594 chrX 388771 intron CG32816 - chrX 389568 intron CG32816 - chrX 390365 intron CG32816 - chrX_7_385001 chrX_385001 RAL-307_125b 3581 chrX 388251 388320 chrX 390548 390617 22 2298 40.5 64.5 52.5 0.4 2366 chrX 388251 intron CG32816 - chrX 389434 intron CG32816 - chrX 390617 intron CG32816 - chrX_22_385001 chrX_385001 RAL-307_125b 3582 chrX 428377 428446 chrX 434612 434641 3S18 28 6231 9.0 10.5 9.8 2.6 6264 chrX 428377 intron CG32816 - chrX 431509 intron CG32816 - chrX 434641 intron CG32816 - chrX_28_430001 chrX_430001 RAL-307_125b 3583 chrX 494569 494621 chrX 494711 494763 22 140 11.0 7.0 9.0 2.2 194 chrX 494569 intergenic CG17778 + chrX 494666 5` UTR CG17778 + chrX 494763 intron CG17778 + chrX_22_490001 chrX_490001 RAL-307_125b 3584 chrX 551385 551447 chrX 558997 559034 412 19 7607 6.0 3.0 4.5 3.5 7649 chrX 551385 intron Appl + chrX 555210 intron Appl + chrX 559034 intron Appl + chrX_19_555001 chrX_555001 RAL-307_125b 3585 chrX 714225 714283 chrX 714408 714463 18 172 3.0 6.0 4.5 3.3 238 chrX 714225 intron sdk + chrX 714344 intron sdk + chrX 714463 intron sdk + chrX_18_710001 chrX_710001 RAL-307_125b 3586 chrX 802242 802312 chrX 802369 802369 19 112 8.5 9.5 9.0 1.9 127 chrX 802242 exon CG13359 - chrX 802306 exon CG13359 - chrX 802369 exon CG13359 - chrX_19_800001 chrX_800001 RAL-307_125b 3587 chrX 812224 812243 chrX 817905 817923 297 7 5680 19.5 8.0 13.8 0.5 5699 chrX 812224 intron CG43867 - chrX 815074 intron CG43867 - chrX 817923 intron CG43867 - chrX_7_815001 chrX_815001 RAL-307_125b 3588 chrX 812247 812289 chrX 817904 817970 297 23 5675 8.0 8.0 8.0 2.6 5723 chrX 812247 intron CG43867 - chrX 815108 intron CG43867 - chrX 817970 intron CG43867 - chrX_23_815001 chrX_815001 RAL-307_125b 3589 chrX 827560 827630 chrX 835402 835462 roo 23 7841 15.0 13.0 14.0 1.5 7902 chrX 827560 intron CG43867 - chrX 831511 intron CG43867 - chrX 835462 intron CG43867 - chrX_23_830001 chrX_830001 RAL-307_125b 3590 chrX 888666 888675 chrX 888795 888804 5 129 16.5 2.0 9.2 0.5 138 chrX 888666 intron CG43867 - chrX 888735 intron CG43867 - chrX 888804 intron CG43867 - chrX_5_885001 chrX_885001 RAL-307_125b 3591 chrX 906663 906727 chrX 908492 908566 S-element 24 1836 10.5 6.0 8.2 2.6 1903 chrX 906663 intron CG43867 - chrX 907614 intron CG43867 - chrX 908566 intron CG43867 - chrX_24_905001 chrX_905001 RAL-307_125b 3592 chrX 949082 949088 chrX 949228 949234 6 146 17.5 17.5 17.5 0.3 152 chrX 949082 3` UTR CG3690 - chrX 949158 3` UTR CG3690 - chrX 949234 3` UTR CG3690 - chrX_6_945001 chrX_945001 RAL-307_125b 3593 chrX 949090 949124 chrX 949236 949258 18 144 8.5 18.5 13.5 1.2 168 chrX 949090 3` UTR CG3690 - chrX 949174 3` UTR CG3690 - chrX 949258 3` UTR CG3690 - chrX_18_945001 chrX_945001 RAL-307_125b 3594 chrX 1033312 1033325 chrX 1040995 1041008 412 6 7683 16.0 5.0 10.5 0.5 7696 chrX 1033312 intron su(w[a]) + chrX 1037160 intron su(w[a]) + chrX 1041008 intron su(w[a]) + chrX_6_1035001 chrX_1035001 RAL-307_125b 3595 chrX 1051037 1051046 chrX 1051165 1051174 7 128 25.0 15.0 20.0 0.3 137 chrX 1051037 intron CR44779 + chrX 1051106 intron CR44779 + chrX 1051174 intron CR44779 + chrX_7_1050001 chrX_1050001 RAL-307_125b 3596 chrX 1051047 1051080 chrX 1051155 1051174 18 118 19.0 15.5 17.2 1.0 127 chrX 1051047 intron CR44779 + chrX 1051110 intron CR44779 + chrX 1051174 intron CR44779 + chrX_18_1050001 chrX_1050001 RAL-307_125b 3597 chrX 1063726 1063749 chrX 1072556 1072592 roo 10 8838 13.0 8.0 10.5 0.9 8866 chrX 1063726 intron CR44779 + chrX 1068159 intron CR44779 + chrX 1072592 intron CR44779 + chrX_10_1065001 chrX_1065001 RAL-307_125b 3598 chrX 1151743 1151774 chrX 1152058 1152089 8 313 18.0 6.5 12.2 0.6 346 chrX 1151743 intergenic not near genes chrX 1151916 intergenic not near genes chrX 1152089 intergenic not near genes chrX_8_1150001 chrX_1150001 RAL-307_125b 3599 chrX 1151778 1151812 chrX 1152057 1152127 18 308 7.5 6.5 7.0 2.2 349 chrX 1151778 intergenic not near genes chrX 1151952 intergenic not near genes chrX 1152127 intergenic not near genes chrX_18_1150001 chrX_1150001 RAL-307_125b 3600 chrX 1229611 1229641 chrX 1229747 1229762 11 133 12.5 6.5 9.5 1.0 151 chrX 1229611 intron CG3638 - chrX 1229686 intron CG3638 - chrX 1229762 intron CG3638 - chrX_11_1225001 chrX_1225001 RAL-307_125b 3601 chrX 1229645 1229661 chrX 1229745 1229777 6 127 10.0 6.5 8.2 0.7 132 chrX 1229645 intron CG3638 - chrX 1229711 intron CG3638 - chrX 1229777 intron CG3638 - chrX_6_1225001 chrX_1225001 RAL-307_125b 3602 chrX 1253689 1253761 chrX 1253821 1253893 15 127 9.0 8.5 8.8 1.5 204 chrX 1253689 intron Atf3 - chrX 1253791 intron Atf3 - chrX 1253893 intron Atf3 - chrX_15_1250001 chrX_1250001 RAL-307_125b 3603 chrX 1357731 1357795 chrX 1367951 1368015 Doc 28 10220 17.0 9.5 13.2 2.0 10284 chrX 1357731 intergenic png - chrX 1362873 intergenic not near genes chrX 1368015 intergenic not near genes chrX_28_1360001 chrX_1360001 RAL-307_125b 3604 chrX 1518005 1518039 chrX 1523457 1523491 jockey 20 5445 7.0 13.5 10.2 1.8 5486 chrX 1518005 intergenic inc + chrX 1520748 intergenic not near genes chrX 1523491 intergenic not near genes chrX_20_1520001 chrX_1520001 RAL-307_125b 3605 chrX 1518040 1518061 chrX 1523456 1523513 jockey 9 5436 4.5 13.5 9.0 0.9 5473 chrX 1518040 intergenic inc + chrX 1520776 intergenic not near genes chrX 1523513 intergenic not near genes chrX_9_1520001 chrX_1520001 RAL-307_125b 3606 chrX 1559870 1559952 chrX 1560004 1560016 21 123 8.5 7.5 8.0 2.3 146 chrX 1559870 intron Mur2B - chrX 1559943 intron Mur2B - chrX 1560016 intron Mur2B - chrX_21_1555001 chrX_1555001 RAL-307_125b 3607 chrX 1706807 1706814 chrX 1706933 1706933 4 124 14.5 8.5 11.5 0.3 126 chrX 1706807 intergenic not near genes chrX 1706870 intergenic not near genes chrX 1706933 intergenic not near genes chrX_4_1705001 chrX_1705001 RAL-307_125b 3608 chrX 1706820 1706842 chrX 1706932 1706949 5 118 11.0 8.5 9.8 0.5 129 chrX 1706820 intergenic not near genes chrX 1706884 intergenic not near genes chrX 1706949 intergenic not near genes chrX_5_1705001 chrX_1705001 RAL-307_125b 3609 chrX 1845686 1845757 chrX 1845836 1845907 35 143 6.5 6.5 6.5 4.7 221 chrX 1845686 intron CG42666 + chrX 1845796 intron CG42666 + chrX 1845907 intron CG42666 + chrX_35_1845001 chrX_1845001 RAL-307_125b 3610 chrX 1930492 1930502 chrX 1938113 1938123 opus 6 7621 21.5 5.0 13.2 0.4 7631 chrX 1930492 3` UTR CG11596 + chrX 1934308 intergenic not near genes chrX 1938123 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RAL-307_125b 3611 chrX 1930503 1930561 chrX 1938109 1938182 opus 25 7620 8.0 4.5 6.2 3.5 7679 chrX 1930503 3` UTR CG11596 + chrX 1934342 intergenic not near genes chrX 1938182 3` UTR CG3857 - chrX_25_1930001 chrX_1930001 RAL-307_125b 3612 chrX 1954850 1954913 chrX 1962833 1962873 Stalker2 8 7968 7.0 9.0 8.0 0.9 8023 chrX 1954850 intron Hr4 + chrX 1958862 intron Hr4 + chrX 1962873 intron Hr4 + chrX_8_1955001 chrX_1955001 RAL-307_125b 3613 chrX 2023916 2023986 chrX 2024089 2024119 29 170 48.5 57.0 52.8 0.5 203 chrX 2023916 3` UTR,3` UTR east +,Actn - chrX 2024018 3` UTR,3` UTR east +,Actn - chrX 2024119 3` UTR,3` UTR east +,Actn - chrX_29_2020001 chrX_2020001 RAL-307_125b 3614 chrX 2020876 2020922 chrX 2025595 2025612 7 4702 36.5 27.0 31.8 0.2 4736 chrX 2020876 exon east + chrX 2023244 3` UTR east + chrX 2025612 exon Actn - chrX_7_2020001 chrX_2020001 RAL-307_125b 3615 chrX 2394272 2394291 chrX 2394404 2394414 8 131 9.0 15.5 12.2 0.6 142 chrX 2394272 intergenic not near genes chrX 2394343 intergenic not near genes chrX 2394414 intergenic not near genes chrX_8_2390001 chrX_2390001 RAL-307_125b 3616 chrX 2399790 2399871 chrX 2408193 2408218 roo 15 8386 3.5 4.0 3.8 3.1 8428 chrX 2399790 intergenic not near genes chrX 2404004 intergenic not near genes chrX 2408218 intergenic not near genes chrX_15_2400001 chrX_2400001 RAL-307_125b 3617 chrX 2429600 2429665 chrX 2429731 2429796 12 130 0.0 5.0 2.5 3.4 196 chrX 2429600 intergenic not near genes chrX 2429698 intergenic not near genes chrX 2429796 intergenic not near genes chrX_12_2425001 chrX_2425001 RAL-307_125b 3618 chrX 2482719 2482741 chrX 2482847 2482863 9 127 15.0 9.5 12.2 0.7 144 chrX 2482719 intron trol - chrX 2482791 intron trol - chrX 2482863 intron trol - chrX_9_2480001 chrX_2480001 RAL-307_125b 3619 chrX 2517804 2517875 chrX 2517931 2518002 11 127 5.0 4.5 4.8 1.9 198 chrX 2517804 intron trol - chrX 2517903 intron trol - chrX 2518002 intron trol - chrX_11_2515001 chrX_2515001 RAL-307_125b 3620 chrX 2525442 2525506 chrX 2525561 2525637 28 125 8.5 12.5 10.5 2.4 195 chrX 2525442 intron trol - chrX 2525540 intron trol - chrX 2525637 intron trol - chrX_28_2525001 chrX_2525001 RAL-307_125b 3621 chrX 2559322 2559380 chrX 2559460 2559479 34 135 11.0 10.5 10.8 2.9 157 chrX 2559322 intron Pdfr + chrX 2559400 intron Pdfr + chrX 2559479 intron Pdfr + chrX_34_2555001 chrX_2555001 RAL-307_125b 3622 chrX 2568181 2568223 chrX 2568445 2568481 15 288 8.5 6.0 7.2 1.8 300 chrX 2568181 intron Pdfr + chrX 2568331 intron Pdfr + chrX 2568481 intron Pdfr + chrX_15_2565001 chrX_2565001 RAL-307_125b 3623 chrX 2578770 2578810 chrX 2578912 2578932 16 140 6.5 12.5 9.5 1.5 162 chrX 2578770 intergenic Pdfr +,Vha36-3 - chrX 2578851 intergenic Pdfr +,Vha36-3 - chrX 2578932 intergenic Vha36-3 -,Pdfr + chrX_16_2575001 chrX_2575001 RAL-307_125b 3624 chrX 2578811 2578832 chrX 2578898 2578974 11 133 6.0 9.5 7.8 1.2 163 chrX 2578811 intergenic Pdfr +,Vha36-3 - chrX 2578892 intergenic Vha36-3 -,Pdfr + chrX 2578974 intergenic Vha36-3 -,Pdfr + chrX_11_2575001 chrX_2575001 RAL-307_125b 3625 chrX 2610349 2610415 chrX 2617516 2617607 HMS-Beagle 17 7166 11.0 13.5 12.2 1.3 7258 chrX 2610349 intergenic CG8636 - chrX 2613978 intergenic not near genes chrX 2617607 intergenic Tsp3A - chrX_17_2610001 chrX_2610001 RAL-307_125b 3626 chrX 2635332 2635400 chrX 2635483 2635559 34 154 10.0 11.5 10.8 2.9 227 chrX 2635332 intron sgg + chrX 2635446 intron sgg + chrX 2635559 intron sgg + chrX_34_2635001 chrX_2635001 RAL-307_125b 3627 chrX 2638325 2638377 chrX 2638455 2638490 13 132 6.5 9.0 7.8 1.5 165 chrX 2638325 intron sgg + chrX 2638408 intron sgg + chrX 2638490 intron sgg + chrX_13_2635001 chrX_2635001 RAL-307_125b 3628 chrX 2664346 2664411 chrX 2665542 2665605 1360 37 1194 10.0 6.5 8.2 4.0 1259 chrX 2664346 intron sgg + chrX 2664976 intron sgg + chrX 2665605 intron sgg + chrX_37_2660001 chrX_2660001 RAL-307_125b 3629 chrX 2823752 2823768 chrX 2832350 2832361 roo 7 8595 12.0 5.5 8.8 0.7 8609 chrX 2823752 intron kirre + chrX 2828056 intron kirre + chrX 2832361 intron kirre + chrX_7_2825001 chrX_2825001 RAL-307_125b 3630 chrX 2823769 2823778 chrX 2832347 2832376 roo 4 8592 8.0 5.5 6.8 0.5 8607 chrX 2823769 intron kirre + chrX 2828072 intron kirre + chrX 2832376 intron kirre + chrX_4_2825001 chrX_2825001 RAL-307_125b 3631 chrX 2844859 2844893 chrX 2852319 2852353 mdg1 16 7458 16.5 12.0 14.2 1.1 7494 chrX 2844859 intron kirre + chrX 2848606 intron kirre + chrX 2852353 intron kirre + chrX_16_2845001 chrX_2845001 RAL-307_125b 3632 chrX 2844894 2844921 chrX 2852308 2852381 mdg1 9 7455 9.0 9.5 9.2 0.9 7487 chrX 2844894 intron kirre + chrX 2848638 intron kirre + chrX 2852381 intron kirre + chrX_9_2845001 chrX_2845001 RAL-307_125b 3633 chrX 2888075 2888140 chrX 2888199 2888267 11 125 5.0 5.0 5.0 1.8 192 chrX 2888075 intron kirre + chrX 2888171 intron kirre + chrX 2888267 intron kirre + chrX_11_2885001 chrX_2885001 RAL-307_125b 3634 chrX 3057982 3058043 chrX 3058273 3058334 pogo 31 290 5.5 5.0 5.2 5.0 352 chrX 3057982 intron kirre + chrX 3058158 intron kirre + chrX 3058334 intron kirre + chrX_31_3055001 chrX_3055001 RAL-307_125b 3635 chrX 3075589 3075664 chrX 3080946 3080972 Transpac 28 5353 6.5 12.0 9.2 2.7 5383 chrX 3075589 intron kirre + chrX 3078280 intron kirre + chrX 3080972 intron kirre + chrX_28_3075001 chrX_3075001 RAL-307_125b 3636 chrX 3120619 3120634 chrX 3120740 3120761 8 126 3.5 4.0 3.8 1.7 142 chrX 3120619 intron kirre + chrX 3120690 intron kirre + chrX 3120761 intron kirre + chrX_8_3120001 chrX_3120001 RAL-307_125b 3637 chrX 3178459 3178489 chrX 3186172 3186202 opus 6 7710 5.0 8.0 6.5 0.8 7743 chrX 3178459 intron dnc + chrX 3182330 intron dnc + chrX 3186202 intron dnc + chrX_6_3180001 chrX_3180001 RAL-307_125b 3638 chrX 3206434 3206454 chrX 3206563 3206583 10 129 8.0 8.0 8.0 1.1 149 chrX 3206434 intron dnc + chrX 3206508 intron dnc + chrX 3206583 intron dnc + chrX_10_3205001 chrX_3205001 RAL-307_125b 3639 chrX 3218499 3218538 chrX 3227668 3227707 roo 5 9187 1.0 8.5 4.8 0.9 9208 chrX 3218499 intron dnc + chrX 3223103 intron dnc + chrX 3227707 intron dnc + chrX_5_3220001 chrX_3220001 RAL-307_125b 3640 chrX 3306300 3306305 chrX 3306432 3306437 4 132 21.5 1.0 11.2 0.3 137 chrX 3306300 intron dnc + chrX 3306368 intron dnc + chrX 3306437 intron dnc + chrX_4_3305001 chrX_3305001 RAL-307_125b 3641 chrX 3306306 3306373 chrX 3306430 3306505 11 131 11.0 1.5 6.2 1.5 199 chrX 3306306 intron dnc + chrX 3306406 intron dnc + chrX 3306505 intron dnc + chrX_11_3305001 chrX_3305001 RAL-307_125b 3642 chrX 3351777 3351811 chrX 3351891 3351946 13 124 15.5 15.5 15.5 0.8 169 chrX 3351777 intergenic not near genes chrX 3351862 intergenic not near genes chrX 3351946 intergenic not near genes chrX_13_3350001 chrX_3350001 RAL-307_125b 3643 chrX 3352712 3352737 chrX 3352851 3352876 8 139 13.5 6.5 10.0 0.7 164 chrX 3352712 intergenic not near genes chrX 3352794 intergenic not near genes chrX 3352876 intergenic not near genes chrX_8_3350001 chrX_3350001 RAL-307_125b 3644 chrX 3398331 3398379 chrX 3398459 3398507 23 126 12.0 13.0 12.5 1.7 176 chrX 3398331 intron,intron CR44999 +,CG12535 - chrX 3398419 intron,intron CR44999 +,CG12535 - chrX 3398507 intron,intron CR44999 +,CG12535 - chrX_23_3395001 chrX_3395001 RAL-307_125b 3645 chrX 3408936 3409018 chrX 3409062 3409120 22 123 8.0 4.0 6.0 3.1 184 chrX 3408936 intron,intron CR44999 +,CG12535 - chrX 3409028 intron,intron CR44999 +,CG12535 - chrX 3409120 intron,intron CR44999 +,CG12535 - chrX_22_3405001 chrX_3405001 RAL-307_125b 3646 chrX 3414975 3415033 chrX 3421210 3421268 3S18 21 6230 5.0 9.5 7.2 2.6 6293 chrX 3414975 intron,intron CR44999 +,CG12535 - chrX 3418122 intron,intron CR44999 +,CG12535 - chrX 3421268 intron,intron CR44999 +,CG12535 - chrX_21_3415001 chrX_3415001 RAL-307_125b 3647 chrX 3493045 3493094 chrX 3502253 3502303 roo 19 9209 4.5 3.0 3.8 4.0 9258 chrX 3493045 intron,exon CR44999 +,Gas8 - chrX 3497674 intron,intron CR44999 +,Gas8 - chrX 3502303 intron,intron CR44999 +,Gas8 - chrX_19_3495001 chrX_3495001 RAL-307_125b 3648 chrX 3567271 3567292 chrX 3567406 3567427 7 134 0.5 11.0 5.8 1.0 156 chrX 3567271 intron,intron CG32791 -,ppk8 + chrX 3567349 intron,intron CG32791 -,ppk8 + chrX 3567427 intron,intron CG32791 -,ppk8 + chrX_7_3565001 chrX_3565001 RAL-307_125b 3649 chrX 3597060 3597131 chrX 3597198 3597269 31 137 0.5 7.5 4.0 6.2 209 chrX 3597060 intron AstA-R1 + chrX 3597164 intron AstA-R1 + chrX 3597269 intron AstA-R1 + chrX_31_3595001 chrX_3595001 RAL-307_125b 3650 chrX 3597507 3597583 chrX 3619725 3619802 roo 22 22218 8.0 7.5 7.8 2.5 22295 chrX 3597507 intron AstA-R1 + chrX 3608654 intron AstA-R1 + chrX 3619802 intron AstA-R1 + chrX_22_3605001 chrX_3605001 RAL-307_125b 3651 chrX 3640280 3640312 chrX 3640435 3640467 8 155 7.0 16.0 11.5 0.6 187 chrX 3640280 intron AstA-R1 + chrX 3640374 intron AstA-R1 + chrX 3640467 intron AstA-R1 + chrX_8_3640001 chrX_3640001 RAL-307_125b 3652 chrX 3657367 3657442 chrX 3657497 3657564 36 127 7.5 5.0 6.2 5.0 197 chrX 3657367 intron AstA-R1 + chrX 3657466 intron AstA-R1 + chrX 3657564 intron AstA-R1 + chrX_36_3655001 chrX_3655001 RAL-307_125b 3653 chrX 3726726 3726794 chrX 3730173 3730190 NOF 24 3441 6.5 13.5 10.0 2.2 3464 chrX 3726726 intron tlk + chrX 3728458 intron tlk + chrX 3730190 intron tlk + chrX_24_3725001 chrX_3725001 RAL-307_125b 3654 chrX 3763520 3763530 chrX 3763851 3763861 7 331 22.0 15.5 18.8 0.4 341 chrX 3763520 intron tlk + chrX 3763690 intron tlk + chrX 3763861 intron tlk + chrX_7_3760001 chrX_3760001 RAL-307_125b 3655 chrX 3763531 3763577 chrX 3763839 3763908 21 328 11.0 10.0 10.5 1.8 377 chrX 3763531 intron tlk + chrX 3763720 intron tlk + chrX 3763908 intron tlk + chrX_21_3760001 chrX_3760001 RAL-307_125b 3656 chrX 3842302 3842352 chrX 3842570 3842585 pogo 23 265 4.5 8.5 6.5 3.1 283 chrX 3842302 intron ec + chrX 3842444 intron ec + chrX 3842585 intron ec + chrX_23_3840001 chrX_3840001 RAL-307_125b 3657 chrX 3880453 3880488 chrX 3880589 3880614 13 135 1.0 18.0 9.5 1.2 161 chrX 3880453 intergenic VhaAC39-1 + chrX 3880534 intergenic VhaAC39-1 + chrX 3880614 intergenic VhaAC39-1 + chrX_13_3880001 chrX_3880001 RAL-307_125b 3658 chrX 3881244 3881296 chrX 3881433 3881485 19 189 8.5 7.0 7.8 2.2 241 chrX 3881244 intron VhaAC39-1 + chrX 3881364 intron VhaAC39-1 + chrX 3881485 exon VhaAC39-1 + chrX_19_3880001 chrX_3880001 RAL-307_125b 3659 chrX 3891105 3891173 chrX 3891267 3891341 26 161 9.0 8.0 8.5 2.7 236 chrX 3891105 intergenic CG42541 - chrX 3891223 intergenic CG42541 - chrX 3891341 intergenic CG42541 - chrX_26_3890001 chrX_3890001 RAL-307_125b 3660 chrX 3922091 3922098 chrX 3922412 3922419 4 321 16.0 14.0 15.0 0.2 328 chrX 3922091 intron CG42541 - chrX 3922255 intron CG42541 - chrX 3922419 intron CG42541 - chrX_4_3920001 chrX_3920001 RAL-307_125b 3661 chrX 3922102 3922160 chrX 3922400 3922442 15 314 3.0 13.0 8.0 1.7 340 chrX 3922102 intron CG42541 - chrX 3922272 intron CG42541 - chrX 3922442 intron CG42541 - chrX_15_3920001 chrX_3920001 RAL-307_125b 3662 chrX 3929997 3930067 chrX 3930128 3930198 31 131 11.0 13.5 12.2 2.3 201 chrX 3929997 5` UTR CG42541 - chrX 3930098 5` UTR CG42541 - chrX 3930198 5` UTR CG42541 - chrX_31_3930001 chrX_3930001 RAL-307_125b 3663 chrX 3986839 3986895 chrX 3994495 3994546 412 31 7679 4.5 6.5 5.5 4.8 7707 chrX 3986839 intergenic not near genes chrX 3990692 intergenic not near genes chrX 3994546 intergenic not near genes chrX_31_3990001 chrX_3990001 RAL-307_125b 3664 chrX 4079574 4079586 chrX 4079703 4079715 4 129 12.0 12.5 12.2 0.3 141 chrX 4079574 intron CG43689 + chrX 4079644 intron CG43689 + chrX 4079715 intron CG43689 + chrX_4_4075001 chrX_4075001 RAL-307_125b 3665 chrX 4101820 4101899 chrX 4101948 4102005 20 126 4.5 7.0 5.8 2.9 185 chrX 4101820 exon CG15375 + chrX 4101912 exon CG15375 + chrX 4102005 exon CG15375 + chrX_20_4100001 chrX_4100001 RAL-307_125b 3666 chrX 4132633 4132694 chrX 4132851 4132912 22 216 10.0 12.0 11.0 1.8 279 chrX 4132633 3` UTR GlcAT-I + chrX 4132772 3` UTR GlcAT-I + chrX 4132912 3` UTR Fas2 - chrX_22_4130001 chrX_4130001 RAL-307_125b 3667 chrX 4157853 4157923 chrX 4164950 4165022 297 25 7100 2.5 5.0 3.8 5.2 7169 chrX 4157853 intron Fas2 - chrX 4161438 intron Fas2 - chrX 4165022 intron Fas2 - chrX_25_4160001 chrX_4160001 RAL-307_125b 3668 chrX 4201965 4201997 chrX 4202093 4202125 17 125 17.5 12.5 15.0 1.1 160 chrX 4201965 intron Fas2 - chrX 4202045 intron Fas2 - chrX 4202125 intron Fas2 - chrX_17_4200001 chrX_4200001 RAL-307_125b 3669 chrX 4201998 4202029 chrX 4202092 4202151 12 124 9.5 12.0 10.8 1.0 153 chrX 4201998 intron Fas2 - chrX 4202074 intron Fas2 - chrX 4202151 intron Fas2 - chrX_12_4200001 chrX_4200001 RAL-307_125b 3670 chrX 4235701 4235740 chrX 4235878 4235917 9 175 5.0 11.5 8.2 1.0 216 chrX 4235701 intergenic not near genes chrX 4235809 intergenic not near genes chrX 4235917 intergenic not near genes chrX_9_4235001 chrX_4235001 RAL-307_125b 3671 chrX 4296086 4296122 chrX 4296208 4296248 5 122 13.0 14.5 13.8 0.3 162 chrX 4296086 intergenic not near genes chrX 4296167 intergenic not near genes chrX 4296248 intergenic not near genes chrX_5_4295001 chrX_4295001 RAL-307_125b 3672 chrX 4324344 4324412 chrX 4324471 4324539 23 123 5.0 8.5 6.8 2.9 195 chrX 4324344 intron norpA + chrX 4324442 intron norpA + chrX 4324539 intron norpA + chrX_23_4320001 chrX_4320001 RAL-307_125b 3673 chrX 4396927 4397002 chrX 4397062 4397137 25 129 8.5 6.0 7.2 3.0 210 chrX 4396927 intron CR32773 - chrX 4397032 intron CR32773 - chrX 4397137 intron CR32773 - chrX_25_4395001 chrX_4395001 RAL-307_125b 3674 chrX 4398274 4398295 chrX 4398410 4398410 4 126 13.5 7.0 10.2 0.4 136 chrX 4398274 intron CR32773 - chrX 4398342 intron CR32773 - chrX 4398410 intron CR32773 - chrX_4_4395001 chrX_4395001 RAL-307_125b 3675 chrX 4436461 4436497 chrX 4436594 4436630 21 130 6.5 19.5 13.0 1.5 169 chrX 4436461 intron,intron CR32773 -,bi + chrX 4436546 intron,intron CR32773 -,bi + chrX 4436630 intron,intron CR32773 -,bi + chrX_21_4435001 chrX_4435001 RAL-307_125b 3676 chrX 4468815 4468836 chrX 4468963 4468973 6 145 9.5 5.5 7.5 0.7 158 chrX 4468815 intron,intron CR32773 -,bi + chrX 4468894 intron,intron CR32773 -,bi + chrX 4468973 intron,intron CR32773 -,bi + chrX_6_4465001 chrX_4465001 RAL-307_125b 3677 chrX 4660768 4660850 chrX 4660917 4660992 14 148 7.5 0.0 3.8 2.9 224 chrX 4660768 intron CG3009 - chrX 4660880 intron CG3009 - chrX 4660992 intron CG3009 - chrX_14_4660001 chrX_4660001 RAL-307_125b 3678 chrX 4693766 4693782 chrX 4693871 4693905 9 133 0.0 5.0 2.5 2.6 139 chrX 4693766 intron ctp + chrX 4693836 intron ctp + chrX 4693905 intron ctp + chrX_9_4690001 chrX_4690001 RAL-307_125b 3679 chrX 4700339 4700414 chrX 4700735 4700807 jockey 34 391 9.0 12.0 10.5 3.0 468 chrX 4700339 3` UTR ctp + chrX 4700573 3` UTR ctp + chrX 4700807 3` UTR ctp + chrX_34_4700001 chrX_4700001 RAL-307_125b 3680 chrX 4723523 4723584 chrX 4723653 4723659 11 119 5.5 9.5 7.5 1.3 136 chrX 4723523 exon Proc-R + chrX 4723591 intron Proc-R + chrX 4723659 intron Proc-R + chrX_11_4720001 chrX_4720001 RAL-307_125b 3681 chrX 4731778 4731784 chrX 4736919 4736925 jockey 5 5142 24.0 11.5 17.8 0.3 5147 chrX 4731778 intergenic not near genes chrX 4734352 intergenic not near genes chrX 4736925 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-307_125b 3682 chrX 4744136 4744169 chrX 4744284 4744312 11 147 7.5 10.0 8.8 1.1 176 chrX 4744136 intergenic not near genes chrX 4744224 intergenic not near genes chrX 4744312 intergenic not near genes chrX_11_4740001 chrX_4740001 RAL-307_125b 3683 chrX 4763206 4763279 chrX 4763744 4763799 Stalker4 36 533 10.5 12.5 11.5 2.9 593 chrX 4763206 intergenic not near genes chrX 4763502 intergenic not near genes chrX 4763799 intergenic not near genes chrX_36_4760001 chrX_4760001 RAL-307_125b 3684 chrX 4792337 4792387 chrX 4792820 4792859 jockey 14 479 11.0 6.0 8.5 1.5 522 chrX 4792337 intergenic not near genes chrX 4792598 intergenic not near genes chrX 4792859 intergenic not near genes chrX_14_4790001 chrX_4790001 RAL-307_125b 3685 chrX 4815022 4815030 chrX 4815177 4815185 5 155 0.0 15.5 7.8 0.6 163 chrX 4815022 intergenic not near genes chrX 4815104 intergenic not near genes chrX 4815185 intergenic not near genes chrX_5_4815001 chrX_4815001 RAL-307_125b 3686 chrX 4827935 4827965 chrX 4835356 4835386 Stalker4 7 7421 13.5 7.0 10.2 0.6 7451 chrX 4827935 intergenic not near genes chrX 4831660 intergenic not near genes chrX 4835386 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-307_125b 3687 chrX 4827967 4827997 chrX 4835343 4835377 Stalker4 16 7395 6.5 5.5 6.0 2.3 7410 chrX 4827967 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835377 intergenic not near genes chrX_16_4830001 chrX_4830001 RAL-307_125b 3688 chrX 4846556 4846629 chrX 4846808 4846831 35 249 8.0 9.5 8.8 3.6 275 chrX 4846556 intron CG42594 + chrX 4846694 intron CG42594 + chrX 4846831 intron CG42594 + chrX_35_4845001 chrX_4845001 RAL-307_125b 3689 chrX 4864128 4864169 chrX 4864254 4864297 12 126 11.0 13.5 12.2 0.9 169 chrX 4864128 intron CG42594 + chrX 4864212 intron CG42594 + chrX 4864297 intron CG42594 + chrX_12_4860001 chrX_4860001 RAL-307_125b 3690 chrX 4893323 4893390 chrX 4893635 4893709 17 315 3.5 8.5 6.0 2.4 386 chrX 4893323 intron CG42594 + chrX 4893516 intron CG42594 + chrX 4893709 intron CG42594 + chrX_17_4890001 chrX_4890001 RAL-307_125b 3691 chrX 4989998 4990068 chrX 4997262 4997332 roo 24 7263 11.0 11.0 11.0 2.0 7334 chrX 4989998 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997332 intron CR44833 - chrX_24_4990001 chrX_4990001 RAL-307_125b 3692 chrX 5002013 5002053 chrX 5002149 5002189 10 131 12.0 8.0 10.0 0.9 176 chrX 5002013 intron CR44833 - chrX 5002101 intron CR44833 - chrX 5002189 intron CR44833 - chrX_10_5000001 chrX_5000001 RAL-307_125b 3693 chrX 5096236 5096262 chrX 5103851 5103877 springer 9 7612 6.0 8.0 7.0 1.1 7641 chrX 5096236 intron,intron CG15465 +,rg + chrX 5100056 intron,intron CG15465 +,rg + chrX 5103877 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-307_125b 3694 chrX 5096263 5096297 chrX 5103838 5103912 springer 9 7606 4.0 6.5 5.2 1.5 7649 chrX 5096263 intron,intron CG15465 +,rg + chrX 5100088 intron,intron CG15465 +,rg + chrX 5103912 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-307_125b 3695 chrX 5105435 5105456 chrX 5105567 5105571 6 133 7.5 10.0 8.8 0.6 136 chrX 5105435 intron,intron CG15465 +,rg + chrX 5105503 intron,intron CG15465 +,rg + chrX 5105571 intron,intron CG15465 +,rg + chrX_6_5105001 chrX_5105001 RAL-307_125b 3696 chrX 5120615 5120659 chrX 5120773 5120814 13 151 5.0 1.0 3.0 3.2 199 chrX 5120615 intron,intron CG15465 +,rg + chrX 5120714 intron,intron CG15465 +,rg + chrX 5120814 intron,intron CG15465 +,rg + chrX_13_5120001 chrX_5120001 RAL-307_125b 3697 chrX 5134789 5134823 chrX 5134934 5134950 19 147 6.5 12.5 9.5 1.8 161 chrX 5134789 intron,intron CG15465 +,rg + chrX 5134870 intron,intron CG15465 +,rg + chrX 5134950 intron,intron CG15465 +,rg + chrX_19_5130001 chrX_5130001 RAL-307_125b 3698 chrX 5189218 5189230 chrX 5189363 5189376 8 146 12.5 9.0 10.8 0.7 158 chrX 5189218 intron,intron CG15465 +,rg + chrX 5189297 intron,intron CG15465 +,rg + chrX 5189376 intron,intron CG15465 +,rg + chrX_8_5185001 chrX_5185001 RAL-307_125b 3699 chrX 5189236 5189290 chrX 5189359 5189426 18 136 5.5 9.0 7.2 2.2 190 chrX 5189236 intron,intron CG15465 +,rg + chrX 5189331 intron,intron CG15465 +,rg + chrX 5189426 intron,intron CG15465 +,rg + chrX_18_5185001 chrX_5185001 RAL-307_125b 3700 chrX 5220343 5220399 chrX 5220634 5220639 9 285 8.0 4.0 6.0 1.3 296 chrX 5220343 intron,intron CG15465 +,rg + chrX 5220491 intron,intron CG15465 +,rg + chrX 5220639 intron,intron CG15465 +,rg + chrX_9_5220001 chrX_5220001 RAL-307_125b 3701 chrX 5272775 5272832 chrX 5272911 5272959 20 133 5.5 5.5 5.5 3.1 184 chrX 5272775 intergenic not near genes chrX 5272867 intergenic not near genes chrX 5272959 intergenic not near genes chrX_20_5270001 chrX_5270001 RAL-307_125b 3702 chrX 5291459 5291511 chrX 5291592 5291641 20 125 14.0 10.5 12.2 1.5 182 chrX 5291459 intergenic not near genes chrX 5291550 intergenic not near genes chrX 5291641 intergenic not near genes chrX_20_5290001 chrX_5290001 RAL-307_125b 3703 chrX 5291711 5291732 chrX 5291837 5291857 6 126 11.5 0.5 6.0 0.9 146 chrX 5291711 intergenic not near genes chrX 5291784 intergenic not near genes chrX 5291857 intergenic not near genes chrX_6_5290001 chrX_5290001 RAL-307_125b 3704 chrX 5323071 5323103 chrX 5323398 5323430 6 327 3.5 6.0 4.8 1.0 359 chrX 5323071 intergenic Rnp4F - chrX 5323250 intergenic not near genes chrX 5323430 intergenic Mcm3 + chrX_6_5320001 chrX_5320001 RAL-307_125b 3705 chrX 5338662 5338678 chrX 5339965 5339981 jockey 5 1303 18.0 4.0 11.0 0.4 1319 chrX 5338662 intergenic not near genes chrX 5339322 intergenic not near genes chrX 5339981 intergenic SK + chrX_5_5335001 chrX_5335001 RAL-307_125b 3706 chrX 5338683 5338723 chrX 5339960 5340026 jockey 10 1299 10.5 4.0 7.2 1.2 1343 chrX 5338683 intergenic not near genes chrX 5339354 intergenic not near genes chrX 5340026 intergenic SK + chrX_10_5335001 chrX_5335001 RAL-307_125b 3707 chrX 5345368 5345426 chrX 5345509 5345587 15 151 0.0 7.0 3.5 3.3 219 chrX 5345368 intron SK + chrX 5345478 intron SK + chrX 5345587 intron SK + chrX_15_5345001 chrX_5345001 RAL-307_125b 3708 chrX 5349231 5349300 chrX 5349358 5349427 29 127 7.5 8.5 8.0 3.2 196 chrX 5349231 intron SK + chrX 5349329 intron SK + chrX 5349427 intron SK + chrX_29_5345001 chrX_5345001 RAL-307_125b 3709 chrX 5389786 5389793 chrX 5392948 5392955 297 8 3162 7.0 22.5 14.8 0.5 3169 chrX 5389786 intron SK + chrX 5391370 intron SK + chrX 5392955 intron SK + chrX_8_5390001 chrX_5390001 RAL-307_125b 3710 chrX 5473544 5473616 chrX 5473670 5473735 26 120 10.5 7.5 9.0 2.6 191 chrX 5473544 intron SPR + chrX 5473640 intron SPR + chrX 5473735 intron SPR + chrX_26_5470001 chrX_5470001 RAL-307_125b 3711 chrX 5481077 5481089 chrX 5485020 5485099 I-element 8 4001 1.0 2.0 1.5 3.2 4022 chrX 5481077 intron SPR + chrX 5483088 intron SPR + chrX 5485099 intron SPR + chrX_8_5480001 chrX_5480001 RAL-307_125b 3712 chrX 5517834 5517872 chrX 5517945 5518008 9 130 3.0 2.5 2.8 2.4 174 chrX 5517834 exon CG12730 + chrX 5517921 intron CG12730 + chrX 5518008 intron CG12730 + chrX_9_5515001 chrX_5515001 RAL-307_125b 3713 chrX 5524801 5524822 chrX 5528714 5528735 412 6 3910 4.5 1.0 2.8 1.6 3934 chrX 5524801 intergenic snoRNA:Psi28S-3342 - chrX 5526768 intergenic not near genes chrX 5528735 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-307_125b 3714 chrX 5727379 5727412 chrX 5732162 5732201 Doc 17 4788 8.0 9.0 8.5 1.8 4822 chrX 5727379 intron CG32758 - chrX 5729790 intron CG32758 - chrX 5732201 intron CG32758 - chrX_17_5725001 chrX_5725001 RAL-307_125b 3715 chrX 5883765 5883792 chrX 5884056 5884083 pogo 20 291 24.0 6.5 15.2 1.2 318 chrX 5883765 intron CR45668 - chrX 5883924 intron CR45668 - chrX 5884083 intron CR45668 - chrX_20_5880001 chrX_5880001 RAL-307_125b 3716 chrX 5883794 5883841 chrX 5884050 5884056 pogo 27 284 9.0 6.5 7.8 3.1 262 chrX 5883794 intron CR45668 - chrX 5883925 intron CR45668 - chrX 5884056 intron CR45668 - chrX_27_5880001 chrX_5880001 RAL-307_125b 3717 chrX 5884120 5884186 chrX 5884411 5884477 pogo 24 288 7.5 9.5 8.5 2.5 357 chrX 5884120 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884477 intron CR45668 - chrX_24_5880001 chrX_5880001 RAL-307_125b 3718 chrX 5953737 5953760 chrX 5953912 5953915 4 166 7.0 12.0 9.5 0.4 178 chrX 5953737 exon CG6048 + chrX 5953826 exon CG6048 + chrX 5953915 exon CG6048 + chrX_4_5950001 chrX_5950001 RAL-307_125b 3719 chrX 6003291 6003312 chrX 6003397 6003443 12 125 1.0 9.5 5.2 1.9 152 chrX 6003291 intron CR44498 + chrX 6003367 intron CR44498 + chrX 6003443 intron CR44498 + chrX_12_6000001 chrX_6000001 RAL-307_125b 3720 chrX 6160329 6160391 chrX 6160468 6160530 28 138 2.0 13.5 7.8 3.2 201 chrX 6160329 intron Ca-alpha1T - chrX 6160430 intron Ca-alpha1T - chrX 6160530 intron Ca-alpha1T - chrX_28_6160001 chrX_6160001 RAL-307_125b 3721 chrX 6171567 6171601 chrX 6179024 6179084 Quasimodo 13 7476 9.0 9.5 9.2 1.3 7517 chrX 6171567 intron Ca-alpha1T - chrX 6175326 intron Ca-alpha1T - chrX 6179084 intron Ca-alpha1T - chrX_13_6175001 chrX_6175001 RAL-307_125b 3722 chrX 6215321 6215334 chrX 6215454 6215467 5 133 0.5 13.5 7.0 0.6 146 chrX 6215321 intergenic not near genes chrX 6215394 intergenic not near genes chrX 6215467 intergenic not near genes chrX_5_6215001 chrX_6215001 RAL-307_125b 3723 chrX 6215335 6215364 chrX 6215438 6215467 13 128 0.5 12.0 6.2 1.8 132 chrX 6215335 intergenic not near genes chrX 6215401 intergenic not near genes chrX 6215467 intergenic not near genes chrX_13_6215001 chrX_6215001 RAL-307_125b 3724 chrX 6306504 6306516 chrX 6306631 6306643 4 126 22.0 1.5 11.8 0.3 139 chrX 6306504 3` UTR CG3823 + chrX 6306574 3` UTR CG3823 + chrX 6306643 3` UTR CG3823 + chrX_4_6305001 chrX_6305001 RAL-307_125b 3725 chrX 6306517 6306559 chrX 6306630 6306686 15 124 13.5 1.5 7.5 1.8 169 chrX 6306517 3` UTR CG3823 + chrX 6306602 3` UTR CG3823 + chrX 6306686 3` UTR CG3823 + chrX_15_6305001 chrX_6305001 RAL-307_125b 3726 chrX 6313775 6313855 chrX 6313908 6313988 34 131 8.5 5.5 7.0 4.2 213 chrX 6313775 intron CG15894 + chrX 6313882 intron CG15894 + chrX 6313988 intron CG15894 + chrX_34_6310001 chrX_6310001 RAL-307_125b 3727 chrX 6335195 6335236 chrX 6337748 6337781 Tirant 7 2552 0.0 9.5 4.8 1.2 2586 chrX 6335195 intergenic not near genes chrX 6336488 intergenic not near genes chrX 6337781 5` UTR CG3842 + chrX_7_6335001 chrX_6335001 RAL-307_125b 3728 chrX 6392841 6392874 chrX 6397638 6397662 Doc 11 4806 7.5 0.5 4.0 2.2 4821 chrX 6392841 intergenic not near genes chrX 6395252 intergenic not near genes chrX 6397662 intergenic not near genes chrX_11_6395001 chrX_6395001 RAL-307_125b 3729 chrX 6429962 6429990 chrX 6435483 6435484 Rt1c 12 5515 14.0 16.0 15.0 0.8 5522 chrX 6429962 intron CG42340 - chrX 6432723 intron CG42340 - chrX 6435484 intron CG42340 - chrX_12_6430001 chrX_6430001 RAL-307_125b 3730 chrX 6445258 6445267 chrX 6451070 6451079 297 4 5812 19.5 6.0 12.8 0.3 5821 chrX 6445258 intron CG42340 - chrX 6448168 intron CG42340 - chrX 6451079 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-307_125b 3731 chrX 6539870 6539902 chrX 6540022 6540054 15 151 15.0 10.0 12.5 1.1 184 chrX 6539870 intergenic not near genes chrX 6539962 intergenic not near genes chrX 6540054 intergenic not near genes chrX_15_6535001 chrX_6535001 RAL-307_125b 3732 chrX 6539914 6539943 chrX 6540021 6540090 7 137 5.0 8.5 6.8 0.9 176 chrX 6539914 intergenic not near genes chrX 6540002 intergenic not near genes chrX 6540090 intergenic not near genes chrX_7_6535001 chrX_6535001 RAL-307_125b 3733 chrX 6562775 6562841 chrX 6571307 6571373 Tirant 15 8522 10.5 6.0 8.2 1.6 8598 chrX 6562775 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571373 intron CG34417 + chrX_15_6565001 chrX_6565001 RAL-307_125b 3734 chrX 6605444 6605475 chrX 6608516 6608547 Burdock 14 3070 8.5 12.5 10.5 1.2 3103 chrX 6605444 intron pigs + chrX 6606996 intron pigs + chrX 6608547 intron pigs + chrX_14_6605001 chrX_6605001 RAL-307_125b 3735 chrX 6605477 6605492 chrX 6608503 6608564 Burdock 5 3063 6.0 11.0 8.5 0.5 3087 chrX 6605477 intron pigs + chrX 6607020 intron pigs + chrX 6608564 intron pigs + chrX_5_6605001 chrX_6605001 RAL-307_125b 3736 chrX 6618423 6618470 chrX 6618551 6618598 23 126 13.0 12.0 12.5 1.7 175 chrX 6618423 intron pigs + chrX 6618510 intron pigs + chrX 6618598 intron pigs + chrX_23_6615001 chrX_6615001 RAL-307_125b 3737 chrX 6629737 6629795 chrX 6629873 6629932 26 134 4.5 1.5 3.0 6.5 195 chrX 6629737 intron pigs + chrX 6629834 intron pigs + chrX 6629932 intron pigs + chrX_26_6625001 chrX_6625001 RAL-307_125b 3738 chrX 6733412 6733673 chrX 6733532 6733808 13 122 7.5 8.5 8.0 1.4 396 chrX 6733412 intron,intron CG3168 -,CR43461 + chrX 6733610 intron,intron CG3168 -,CR43461 + chrX 6733808 intron,intron CG3168 -,CR43461 + chrX_13_6730001 chrX_6730001 RAL-307_125b 3739 chrX 6737481 6737520 chrX 6737613 6737642 18 127 14.5 9.0 11.8 1.4 161 chrX 6737481 intron CG3168 - chrX 6737562 intron CG3168 - chrX 6737642 intron CG3168 - chrX_18_6735001 chrX_6735001 RAL-307_125b 3740 chrX 6737527 6737552 chrX 6737600 6737633 8 103 5.5 7.0 6.2 1.1 106 chrX 6737527 intron CG3168 - chrX 6737580 intron CG3168 - chrX 6737633 intron CG3168 - chrX_8_6735001 chrX_6735001 RAL-307_125b 3741 chrX 6746862 6746923 chrX 6747043 6747097 12 175 6.0 7.5 6.8 1.5 235 chrX 6746862 3` UTR CR44964 - chrX 6746980 3` UTR CR44964 - chrX 6747097 3` UTR CR44964 - chrX_12_6745001 chrX_6745001 RAL-307_125b 3742 chrX 6814227 6814254 chrX 6814364 6814379 6 135 5.0 1.5 3.2 1.4 152 chrX 6814227 exon iav + chrX 6814303 intron iav + chrX 6814379 intron iav + chrX_6_6810001 chrX_6810001 RAL-307_125b 3743 chrX 6859538 6859564 chrX 6859994 6860026 4 460 13.0 6.5 9.8 0.4 488 chrX 6859538 intron CG14434 - chrX 6859782 intron CG14434 - chrX 6860026 intron CG14434 - chrX_4_6855001 chrX_6855001 RAL-307_125b 3744 chrX 6859568 6859573 chrX 6859975 6860035 4 448 10.5 3.5 7.0 0.5 467 chrX 6859568 intron CG14434 - chrX 6859802 intron CG14434 - chrX 6860035 intron CG14434 - chrX_4_6855001 chrX_6855001 RAL-307_125b 3745 chrX 6895839 6895862 chrX 6896192 6896215 8 352 8.5 4.5 6.5 1.1 376 chrX 6895839 intergenic not near genes chrX 6896027 intergenic not near genes chrX 6896215 intergenic not near genes chrX_8_6895001 chrX_6895001 RAL-307_125b 3746 chrX 6897276 6897290 chrX 6897626 6897640 9 349 5.0 3.0 4.0 1.8 364 chrX 6897276 intergenic not near genes chrX 6897458 intergenic not near genes chrX 6897640 intergenic not near genes chrX_9_6895001 chrX_6895001 RAL-307_125b 3747 chrX 6897569 6897580 chrX 7243790 7243826 7 346242 3.5 6.0 4.8 1.2 346257 chrX 6897569 intergenic not near genes chrX 7070698 exon CG4607 + chrX 7243826 intron CR44357 - chrX_7_7070001 chrX_7070001 RAL-307_125b 3748 chrX 6897636 6897710 chrX 6897796 6897870 24 156 3.5 6.5 5.0 4.0 234 chrX 6897636 intergenic not near genes chrX 6897753 intergenic not near genes chrX 6897870 intergenic not near genes chrX_24_6895001 chrX_6895001 RAL-307_125b 3749 chrX 6901328 6901378 chrX 6901454 6901504 15 124 9.5 8.5 9.0 1.5 176 chrX 6901328 intergenic not near genes chrX 6901416 intergenic not near genes chrX 6901504 intergenic not near genes chrX_15_6900001 chrX_6900001 RAL-307_125b 3750 chrX 6901758 6901830 chrX 6901917 6901989 37 157 10.0 5.5 7.8 4.2 231 chrX 6901758 intergenic not near genes chrX 6901874 intergenic not near genes chrX 6901989 intergenic not near genes chrX_37_6900001 chrX_6900001 RAL-307_125b 3751 chrX 6989482 6989528 chrX 6989602 6989665 20 136 16.0 16.0 16.0 1.2 183 chrX 6989482 intron ogre - chrX 6989574 intron ogre - chrX 6989665 intron ogre - chrX_20_6985001 chrX_6985001 RAL-307_125b 3752 chrX 7023560 7023621 chrX 7030998 7031061 Tabor 21 7437 11.5 8.5 10.0 1.9 7501 chrX 7023560 intron CG12541 - chrX 7027310 intron CG12541 - chrX 7031061 intron CG12541 - chrX_21_7025001 chrX_7025001 RAL-307_125b 3753 chrX 7047438 7047512 chrX 7047579 7047653 29 139 10.0 7.5 8.8 3.0 215 chrX 7047438 intron CG12541 - chrX 7047546 intron CG12541 - chrX 7047653 intron CG12541 - chrX_29_7045001 chrX_7045001 RAL-307_125b 3754 chrX 7069754 7069834 chrX 7069883 7069940 19 119 5.0 4.5 4.8 3.3 186 chrX 7069754 5` UTR CG4607 + chrX 7069847 5` UTR CG4607 + chrX 7069940 5` UTR CG4607 + chrX_19_7065001 chrX_7065001 RAL-307_125b 3755 chrX 7084362 7084367 chrX 7084491 7084496 4 129 21.0 15.0 18.0 0.2 134 chrX 7084362 intron Sxl - chrX 7084429 intron Sxl - chrX 7084496 intron Sxl - chrX_4_7080001 chrX_7080001 RAL-307_125b 3756 chrX 7084375 7084391 chrX 7084489 7084520 8 124 12.5 14.0 13.2 0.6 145 chrX 7084375 intron Sxl - chrX 7084448 intron Sxl - chrX 7084520 intron Sxl - chrX_8_7080001 chrX_7080001 RAL-307_125b 3757 chrX 7122984 7123044 chrX 7123193 7123231 7 195 6.5 3.0 4.8 1.2 247 chrX 7122984 intergenic not near genes chrX 7123108 intergenic not near genes chrX 7123231 intergenic not near genes chrX_7_7120001 chrX_7120001 RAL-307_125b 3758 chrX 7125219 7125266 chrX 7134428 7134443 roo 22 9207 0.5 11.5 6.0 3.1 9224 chrX 7125219 intergenic not near genes chrX 7129831 intergenic not near genes chrX 7134443 intergenic not near genes chrX_22_7125001 chrX_7125001 RAL-307_125b 3759 chrX 7235513 7235534 chrX 7235650 7235671 11 136 7.5 5.5 6.5 1.5 158 chrX 7235513 intron,intron CG9650 +,CR44357 - chrX 7235592 intron,intron CG9650 +,CR44357 - chrX 7235671 intron,intron CG9650 +,CR44357 - chrX_11_7235001 chrX_7235001 RAL-307_125b 3760 chrX 7357207 7357242 chrX 7357336 7357377 16 131 7.0 11.5 9.2 1.6 170 chrX 7357207 intron,intron CR44357 -,CG1677 - chrX 7357292 intron,intron CR44357 -,CG1677 - chrX 7357377 intron,intron CR44357 -,CG1677 - chrX_16_7355001 chrX_7355001 RAL-307_125b 3761 chrX 7376942 7376946 chrX 7377074 7377078 4 132 12.0 7.5 9.8 0.4 136 chrX 7376942 intron,intron CR44357 -,CG1677 - chrX 7377010 intron,intron CR44357 -,CG1677 - chrX 7377078 intron,intron CR44357 -,CG1677 - chrX_4_7375001 chrX_7375001 RAL-307_125b 3762 chrX 7470180 7470224 chrX 7470318 7470357 10 136 7.0 14.0 10.5 0.9 177 chrX 7470180 intergenic not near genes chrX 7470268 intergenic not near genes chrX 7470357 intergenic not near genes chrX_10_7470001 chrX_7470001 RAL-307_125b 3763 chrX 7679892 7680064 chrX 7680190 7680195 15 254 29.5 17.5 23.5 0.6 303 chrX 7679892 intergenic CR45666 -,CR45667 - chrX 7680044 3` UTR CR45666 - chrX 7680195 3` UTR CR45666 - chrX_15_7680001 chrX_7680001 RAL-307_125b 3764 chrX 7680083 7680126 chrX 7680189 7680258 29 127 13.5 16.5 15.0 1.8 175 chrX 7680083 3` UTR CR45666 - chrX 7680170 3` UTR CR45666 - chrX 7680258 3` UTR CR45666 - chrX_29_7680001 chrX_7680001 RAL-307_125b 3765 chrX 7679859 7679915 chrX 7680427 7680495 25 569 25.5 67.0 46.2 0.5 636 chrX 7679859 intergenic CR45666 -,CR45667 - chrX 7680177 3` UTR CR45666 - chrX 7680495 3` UTR CR45666 - chrX_25_7680001 chrX_7680001 RAL-307_125b 3766 chrX 7702458 7702525 chrX 7702602 7702667 13 137 0.0 4.0 2.0 4.3 209 chrX 7702458 intron CHES-1-like - chrX 7702562 intron CHES-1-like - chrX 7702667 intron CHES-1-like - chrX_13_7700001 chrX_7700001 RAL-307_125b 3767 chrX 7702865 7702879 chrX 7703354 7703368 jockey 7 489 18.0 12.0 15.0 0.4 503 chrX 7702865 intron CHES-1-like - chrX 7703116 intron CHES-1-like - chrX 7703368 intron CHES-1-like - chrX_7_7700001 chrX_7700001 RAL-307_125b 3768 chrX 7702882 7702922 chrX 7703346 7703411 jockey 17 487 8.5 12.0 10.2 1.5 529 chrX 7702882 intron CHES-1-like - chrX 7703146 intron CHES-1-like - chrX 7703411 intron CHES-1-like - chrX_17_7700001 chrX_7700001 RAL-307_125b 3769 chrX 7737111 7737184 chrX 7737243 7737311 30 131 9.5 6.0 7.8 3.4 200 chrX 7737111 5` UTR Tom40 + chrX 7737211 intron Tom40 + chrX 7737311 intron Tom40 + chrX_30_7735001 chrX_7735001 RAL-307_125b 3770 chrX 7832391 7832462 chrX 7832530 7832601 32 138 6.0 8.0 7.0 4.0 210 chrX 7832391 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832601 intron CG1402 + chrX_32_7830001 chrX_7830001 RAL-307_125b 3771 chrX 7845695 7845756 chrX 7847220 7847245 hopper2 25 1535 8.5 8.5 8.5 2.6 1550 chrX 7845695 intergenic not near genes chrX 7846470 intergenic not near genes chrX 7847245 intergenic not near genes chrX_25_7845001 chrX_7845001 RAL-307_125b 3772 chrX 7931591 7931606 chrX 7931710 7931742 7 133 9.5 19.0 14.2 0.5 151 chrX 7931591 intergenic CG10778 -,CG10777 - chrX 7931666 intergenic CG10778 -,CG10777 - chrX 7931742 intergenic CG10778 -,CG10777 - chrX_7_7930001 chrX_7930001 RAL-307_125b 3773 chrX 8031378 8031446 chrX 8035737 8035801 Juan 19 4357 5.5 5.0 5.2 3.1 4423 chrX 8031378 intergenic not near genes chrX 8033590 intergenic not near genes chrX 8035801 3` UTR CG2233 - chrX_19_8030001 chrX_8030001 RAL-307_125b 3774 chrX 8085531 8085552 chrX 8085667 8085688 11 136 19.5 9.5 14.5 0.7 157 chrX 8085531 intron,5` UTR CG2256 -,CR45535 + chrX 8085610 intron,5` UTR CG2256 -,CR45535 + chrX 8085688 intron,5` UTR CG2256 -,CR45535 + chrX_11_8085001 chrX_8085001 RAL-307_125b 3775 chrX 8085556 8085598 chrX 8085658 8085734 23 133 10.5 7.5 9.0 2.3 178 chrX 8085556 intron,5` UTR CG2256 -,CR45535 + chrX 8085645 intron,5` UTR CG2256 -,CR45535 + chrX 8085734 intron,5` UTR CG2256 -,CR45535 + chrX_23_8085001 chrX_8085001 RAL-307_125b 3776 chrX 8092256 8092273 chrX 8092391 8092408 8 135 9.5 6.5 8.0 0.9 152 chrX 8092256 intron Ubc-E2H - chrX 8092332 intron Ubc-E2H - chrX 8092408 intron Ubc-E2H - chrX_8_8090001 chrX_8090001 RAL-307_125b 3777 chrX 8092278 8092280 chrX 8092378 8092415 5 128 9.5 3.0 6.2 0.7 137 chrX 8092278 intron Ubc-E2H - chrX 8092346 intron Ubc-E2H - chrX 8092415 intron Ubc-E2H - chrX_5_8090001 chrX_8090001 RAL-307_125b 3778 chrX 8092281 8092293 chrX 8092376 8092428 4 125 7.5 3.0 5.2 0.6 147 chrX 8092281 intron Ubc-E2H - chrX 8092354 intron Ubc-E2H - chrX 8092428 intron Ubc-E2H - chrX_4_8090001 chrX_8090001 RAL-307_125b 3779 chrX 8092296 8092314 chrX 8092375 8092410 10 126 5.0 2.5 3.8 2.1 114 chrX 8092296 intron Ubc-E2H - chrX 8092353 intron Ubc-E2H - chrX 8092410 intron Ubc-E2H - chrX_10_8090001 chrX_8090001 RAL-307_125b 3780 chrX 8232116 8232132 chrX 8232243 8232259 6 125 19.0 8.0 13.5 0.4 143 chrX 8232116 intron sdt + chrX 8232188 intron sdt + chrX 8232259 intron sdt + chrX_6_8230001 chrX_8230001 RAL-307_125b 3781 chrX 8232140 8232165 chrX 8232228 8232292 12 112 13.0 7.5 10.2 1.1 152 chrX 8232140 intron sdt + chrX 8232216 intron sdt + chrX 8232292 intron sdt + chrX_12_8230001 chrX_8230001 RAL-307_125b 3782 chrX 8288077 8288128 chrX 8288209 8288260 22 131 5.5 10.5 8.0 2.4 183 chrX 8288077 intron nAChRalpha3 - chrX 8288168 intron nAChRalpha3 - chrX 8288260 intron nAChRalpha3 - chrX_22_8285001 chrX_8285001 RAL-307_125b 3783 chrX 8305163 8305219 chrX 8305284 8305340 16 121 6.0 6.0 6.0 2.3 177 chrX 8305163 intron nAChRalpha3 - chrX 8305252 intron nAChRalpha3 - chrX 8305340 intron nAChRalpha3 - chrX_16_8305001 chrX_8305001 RAL-307_125b 3784 chrX 8364797 8364808 chrX 8365244 8365253 BS 7 447 21.5 11.5 16.5 0.4 456 chrX 8364797 intron nAChRalpha3 - chrX 8365025 intron nAChRalpha3 - chrX 8365253 intron nAChRalpha3 - chrX_7_8365001 chrX_8365001 RAL-307_125b 3785 chrX 8364811 8364867 chrX 8365242 8365314 BS 15 445 8.0 10.0 9.0 1.5 503 chrX 8364811 intron nAChRalpha3 - chrX 8365062 intron nAChRalpha3 - chrX 8365314 intron nAChRalpha3 - chrX_15_8365001 chrX_8365001 RAL-307_125b 3786 chrX 8369920 8369922 chrX 8370075 8370077 4 155 22.5 8.5 15.5 0.2 157 chrX 8369920 intergenic not near genes chrX 8369998 intergenic not near genes chrX 8370077 intergenic not near genes chrX_4_8365001 chrX_8365001 RAL-307_125b 3787 chrX 8369925 8369943 chrX 8370074 8370098 9 154 16.5 8.0 12.2 0.7 173 chrX 8369925 intergenic not near genes chrX 8370012 intergenic not near genes chrX 8370098 intergenic not near genes chrX_9_8370001 chrX_8370001 RAL-307_125b 3788 chrX 8369947 8369981 chrX 8370070 8370135 15 148 9.5 8.0 8.8 1.5 188 chrX 8369947 intergenic not near genes chrX 8370041 intergenic not near genes chrX 8370135 intergenic not near genes chrX_15_8370001 chrX_8370001 RAL-307_125b 3789 chrX 8371118 8371155 chrX 8371324 8371358 4 203 11.5 3.5 7.5 0.5 240 chrX 8371118 intergenic not near genes chrX 8371238 intergenic not near genes chrX 8371358 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-307_125b 3790 chrX 8440737 8440753 chrX 8440882 8440896 8 143 14.5 15.0 14.8 0.5 159 chrX 8440737 exon CG1440 + chrX 8440816 3` UTR CG1440 + chrX 8440896 3` UTR CG1440 + chrX_8_8440001 chrX_8440001 RAL-307_125b 3791 chrX 8450964 8451001 chrX 8451093 8451125 14 128 15.0 7.5 11.2 1.1 161 chrX 8450964 intron org-1 - chrX 8451044 intron org-1 - chrX 8451125 exon org-1 - chrX_14_8450001 chrX_8450001 RAL-307_125b 3792 chrX 8464408 8464474 chrX 8464582 8464648 28 172 10.5 4.0 7.2 3.4 240 chrX 8464408 5` UTR Sptr - chrX 8464528 intergenic Sptr - chrX 8464648 intergenic Sptr - chrX_28_8460001 chrX_8460001 RAL-307_125b 3793 chrX 8500895 8500958 chrX 8501109 8501173 11 214 5.5 0.0 2.8 2.9 278 chrX 8500895 intron CG33181 + chrX 8501034 intron CG33181 + chrX 8501173 intron CG33181 + chrX_11_8500001 chrX_8500001 RAL-307_125b 3794 chrX 8536714 8536780 chrX 8536840 8536906 29 126 8.5 14.0 11.2 2.4 192 chrX 8536714 intron Nrg + chrX 8536810 intron Nrg + chrX 8536906 intron Nrg + chrX_29_8535001 chrX_8535001 RAL-307_125b 3795 chrX 8649414 8649447 chrX 8649584 8649590 15 168 18.5 10.0 14.2 1.0 176 chrX 8649414 intron oc - chrX 8649502 intron oc - chrX 8649590 intron oc - chrX_15_8645001 chrX_8645001 RAL-307_125b 3796 chrX 8649454 8649483 chrX 8649583 8649653 15 167 10.0 10.0 10.0 1.4 199 chrX 8649454 intron oc - chrX 8649554 intron oc - chrX 8649653 intron oc - chrX_15_8645001 chrX_8645001 RAL-307_125b 3797 chrX 8727351 8727413 chrX 8727478 8727540 8 127 3.5 7.0 5.2 1.3 189 chrX 8727351 intergenic not near genes chrX 8727446 intergenic not near genes chrX 8727540 intergenic not near genes chrX_8_8725001 chrX_8725001 RAL-307_125b 3798 chrX 8771203 8771255 chrX 8771309 8771336 5 114 4.5 6.5 5.5 0.8 133 chrX 8771203 intron Lim1 - chrX 8771270 intron Lim1 - chrX 8771336 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-307_125b 3799 chrX 8787444 8787498 chrX 8787591 8787610 9 130 5.0 7.0 6.0 1.3 166 chrX 8787444 intron Lim1 - chrX 8787527 intron Lim1 - chrX 8787610 exon Lim1 - chrX_9_8785001 chrX_8785001 RAL-307_125b 3800 chrX 8885625 8885639 chrX 8885775 8885789 7 150 0.0 7.5 3.8 1.5 164 chrX 8885625 intron Moe - chrX 8885707 intron Moe - chrX 8885789 intron Moe - chrX_7_8885001 chrX_8885001 RAL-307_125b 3801 chrX 8885640 8885691 chrX 8885774 8885841 22 148 0.0 7.0 3.5 4.9 201 chrX 8885640 intron Moe - chrX 8885740 intron Moe - chrX 8885841 intron Moe - chrX_22_8885001 chrX_8885001 RAL-307_125b 3802 chrX 8922284 8922352 chrX 8922768 8922835 jockey 21 479 7.5 13.0 10.2 1.9 551 chrX 8922284 intron rdgA + chrX 8922560 intron rdgA + chrX 8922835 intron rdgA + chrX_21_8920001 chrX_8920001 RAL-307_125b 3803 chrX 8948722 8948782 chrX 8956282 8956327 roo 19 7558 0.0 14.0 7.0 2.4 7605 chrX 8948722 intron rdgA + chrX 8952524 intron rdgA + chrX 8956327 intron rdgA + chrX_19_8950001 chrX_8950001 RAL-307_125b 3804 chrX 8968816 8968860 chrX 8968943 8968987 14 122 19.0 20.0 19.5 0.7 171 chrX 8968816 intron rdgA + chrX 8968902 intron rdgA + chrX 8968987 intron rdgA + chrX_14_8965001 chrX_8965001 RAL-307_125b 3805 chrX 9058914 9058960 chrX 9059029 9059083 12 113 8.0 8.0 8.0 1.3 169 chrX 9058914 intron CG15365 - chrX 9058998 intron CG15365 - chrX 9059083 intron CG15365 - chrX_12_9055001 chrX_9055001 RAL-307_125b 3806 chrX 9202668 9202692 chrX 9202794 9202818 9 126 11.0 7.5 9.2 0.9 150 chrX 9202668 intergenic not near genes chrX 9202743 intergenic not near genes chrX 9202818 intergenic not near genes chrX_9_9200001 chrX_9200001 RAL-307_125b 3807 chrX 9218036 9218089 chrX 9218177 9218230 14 138 16.5 9.0 12.8 1.0 194 chrX 9218036 3` UTR t - chrX 9218133 3` UTR t - chrX 9218230 3` UTR t - chrX_14_9215001 chrX_9215001 RAL-307_125b 3808 chrX 9272969 9273045 chrX 9273100 9273176 37 130 7.0 8.5 7.8 4.2 207 chrX 9272969 intergenic Cfp1 -,CG16892 + chrX 9273072 intergenic Cfp1 -,CG16892 + chrX 9273176 intergenic Cfp1 -,CG16892 + chrX_37_9270001 chrX_9270001 RAL-307_125b 3809 chrX 9275962 9276027 chrX 9276121 9276144 23 146 4.0 3.5 3.8 4.8 182 chrX 9275962 3` UTR c11.1 - chrX 9276053 3` UTR c11.1 - chrX 9276144 exon c11.1 - chrX_23_9275001 chrX_9275001 RAL-307_125b 3810 chrX 9308579 9308832 chrX 9308706 9308967 16 124 17.0 17.5 17.2 0.9 388 chrX 9308579 intergenic not near genes chrX 9308773 intergenic not near genes chrX 9308967 intergenic not near genes chrX_16_9305001 chrX_9305001 RAL-307_125b 3811 chrX 9337918 9337967 chrX 9338037 9338109 17 136 2.5 5.5 4.0 3.4 191 chrX 9337918 intron CG34449 - chrX 9338014 intron CG34449 - chrX 9338109 exon CG34449 - chrX_17_9335001 chrX_9335001 RAL-307_125b 3812 chrX 9401977 9401998 chrX 9402100 9402132 10 130 14.0 11.0 12.5 0.7 155 chrX 9401977 intron mgl - chrX 9402054 intron mgl - chrX 9402132 intron mgl - chrX_10_9400001 chrX_9400001 RAL-307_125b 3813 chrX 9402000 9402034 chrX 9402098 9402168 13 118 7.0 10.5 8.8 1.3 168 chrX 9402000 intron mgl - chrX 9402084 intron mgl - chrX 9402168 intron mgl - chrX_13_9400001 chrX_9400001 RAL-307_125b 3814 chrX 9503211 9503211 chrX 22383083 22383377 18 12880064 26.0 162.5 94.2 0.2 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_18_15940001 chrX_15940001 RAL-307_125b 3815 chrX 9508097 9508161 chrX 9509665 9509677 jockey 30 1562 10.0 7.5 8.8 3.1 1580 chrX 9508097 intron CG32700 - chrX 9508887 intron CG32700 - chrX 9509677 intron CG32700 - chrX_30_9505001 chrX_9505001 RAL-307_125b 3816 chrX 9543350 9543424 chrX 9543479 9543553 28 126 8.0 10.0 9.0 2.8 203 chrX 9543350 intron CG32700 - chrX 9543452 intron CG32700 - chrX 9543553 intron CG32700 - chrX_28_9540001 chrX_9540001 RAL-307_125b 3817 chrX 9575768 9575817 chrX 9576117 9576186 mdg3 26 365 7.0 12.5 9.8 2.4 418 chrX 9575768 intron,exon CG32699 -,CG42395 - chrX 9575977 intron,intron CG32699 -,CG42395 - chrX 9576186 intron,5` UTR CG32699 -,CG42395 - chrX_26_9575001 chrX_9575001 RAL-307_125b 3818 chrX 9636450 9636465 chrX 9636655 9636679 14 212 11.5 18.0 14.8 0.9 229 chrX 9636450 intron l(1)G0232 - chrX 9636564 intron l(1)G0232 - chrX 9636679 intron l(1)G0232 - chrX_14_9635001 chrX_9635001 RAL-307_125b 3819 chrX 9636466 9636481 chrX 9636634 9636695 12 210 7.0 11.5 9.2 1.2 229 chrX 9636466 intron l(1)G0232 - chrX 9636580 intron l(1)G0232 - chrX 9636695 intron l(1)G0232 - chrX_12_9635001 chrX_9635001 RAL-307_125b 3820 chrX 9758007 9758030 chrX 9758142 9758165 5 135 10.0 0.0 5.0 0.8 158 chrX 9758007 intergenic not near genes chrX 9758086 intergenic not near genes chrX 9758165 intergenic not near genes chrX_5_9755001 chrX_9755001 RAL-307_125b 3821 chrX 9758031 9758069 chrX 9758136 9758169 7 119 5.5 0.0 2.8 1.8 138 chrX 9758031 intergenic not near genes chrX 9758100 intergenic not near genes chrX 9758169 intergenic not near genes chrX_7_9755001 chrX_9755001 RAL-307_125b 3822 chrX 9787272 9787290 chrX 9787368 9787385 11 113 4.0 4.5 4.2 2.1 113 chrX 9787272 intron CG32698 + chrX 9787328 intron CG32698 + chrX 9787385 intron CG32698 + chrX_11_9785001 chrX_9785001 RAL-307_125b 3823 chrX 9824962 9824969 chrX 9825078 9825102 4 128 11.0 10.0 10.5 0.3 140 chrX 9824962 intron CG32698 + chrX 9825032 intron CG32698 + chrX 9825102 intron CG32698 + chrX_4_9825001 chrX_9825001 RAL-307_125b 3824 chrX 9838434 9838462 chrX 9839453 9839481 9 1019 33.5 24.5 29.0 0.3 1047 chrX 9838434 intron CG32698 + chrX 9838958 intron CG32698 + chrX 9839481 intron CG32698 + chrX_9_9835001 chrX_9835001 RAL-307_125b 3825 chrX 9839299 9839365 chrX 9839432 9839497 26 132 2.5 16.0 9.2 2.5 198 chrX 9839299 intron CG32698 + chrX 9839398 intron CG32698 + chrX 9839497 intron CG32698 + chrX_26_9835001 chrX_9835001 RAL-307_125b 3826 chrX 9837857 9837884 chrX 9839736 9839763 6 1880 45.5 53.0 49.2 0.1 1906 chrX 9837857 intron CG32698 + chrX 9838810 intron CG32698 + chrX 9839763 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-307_125b 3827 chrX 9846165 9846174 chrX 9846291 9846300 4 126 8.0 16.0 12.0 0.3 135 chrX 9846165 exon CG32698 + chrX 9846232 intron CG32698 + chrX 9846300 intron CG32698 + chrX_4_9845001 chrX_9845001 RAL-307_125b 3828 chrX 9923353 9923418 chrX 9923494 9923549 31 134 8.5 10.5 9.5 3.0 196 chrX 9923353 intergenic not near genes chrX 9923451 intergenic not near genes chrX 9923549 intergenic not near genes chrX_31_9920001 chrX_9920001 RAL-307_125b 3829 chrX 9925487 9925555 chrX 9925619 9925677 16 130 8.0 9.5 8.8 1.6 190 chrX 9925487 intergenic not near genes chrX 9925582 intergenic not near genes chrX 9925677 intergenic not near genes chrX_16_9925001 chrX_9925001 RAL-307_125b 3830 chrX 9990036 9990061 chrX 9990162 9990187 9 126 2.5 19.0 10.8 0.8 151 chrX 9990036 intron CG32694 + chrX 9990112 intron CG32694 + chrX 9990187 intron CG32694 + chrX_9_9990001 chrX_9990001 RAL-307_125b 3831 chrX 10046049 10046122 chrX 10046175 10046251 10 116 7.5 1.0 4.2 1.9 202 chrX 10046049 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX 10046150 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX 10046251 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX_10_10045001 chrX_10045001 RAL-307_125b 3832 chrX 10133611 10133619 chrX 10133723 10133730 4 120 9.5 19.5 14.5 0.3 119 chrX 10133611 intron,intron RhoU +,CR44894 - chrX 10133670 intron,intron RhoU +,CR44894 - chrX 10133730 intron,intron RhoU +,CR44894 - chrX_4_10130001 chrX_10130001 RAL-307_125b 3833 chrX 10138190 10138248 chrX 10145744 10145802 412 22 7554 4.5 8.0 6.2 3.1 7612 chrX 10138190 intron,intron RhoU +,CR44894 - chrX 10141996 intron,intron RhoU +,CR44894 - chrX 10145802 intron,intron RhoU +,CR44894 - chrX_22_10140001 chrX_10140001 RAL-307_125b 3834 chrX 10151875 10151936 chrX 10152002 10152063 22 123 5.5 8.0 6.8 2.8 188 chrX 10151875 intron CR44894 - chrX 10151969 intron CR44894 - chrX 10152063 intron CR44894 - chrX_22_10150001 chrX_10150001 RAL-307_125b 3835 chrX 10167814 10167888 chrX 10168610 10168684 16 796 4.5 8.0 6.2 2.2 870 chrX 10167814 intron,intron CR44894 -,CG43902 + chrX 10168249 intron,intron CR44894 -,CG43902 + chrX 10168684 intron,intron CR44894 -,CG43902 + chrX_16_10165001 chrX_10165001 RAL-307_125b 3836 chrX 10216839 10216844 chrX 10216957 10216975 6 128 9.5 11.5 10.5 0.5 136 chrX 10216839 3` UTR l(1)G0230 + chrX 10216907 3` UTR l(1)G0230 + chrX 10216975 3` UTR l(1)G0230 + chrX_6_10215001 chrX_10215001 RAL-307_125b 3837 chrX 10267295 10267326 chrX 10276495 10276526 roo 7 9198 0.5 6.0 3.2 1.7 9231 chrX 10267295 3` UTR alpha-Man-I - chrX 10271910 intron alpha-Man-I - chrX 10276526 3` UTR alpha-Man-I - chrX_7_10270001 chrX_10270001 RAL-307_125b 3838 chrX 10285849 10285904 chrX 10286223 10286290 14 378 6.0 6.0 6.0 2.0 441 chrX 10285849 intron alpha-Man-I - chrX 10286070 intron alpha-Man-I - chrX 10286290 intron alpha-Man-I - chrX_14_10285001 chrX_10285001 RAL-307_125b 3839 chrX 10306008 10306080 chrX 10306148 10306213 11 138 13.0 0.5 6.8 1.4 205 chrX 10306008 intron alpha-Man-I - chrX 10306110 intron alpha-Man-I - chrX 10306213 intron alpha-Man-I - chrX_11_10305001 chrX_10305001 RAL-307_125b 3840 chrX 10317504 10317582 chrX 10317634 10317710 28 126 8.0 8.5 8.2 3.0 206 chrX 10317504 intron alpha-Man-I - chrX 10317607 intron alpha-Man-I - chrX 10317710 intron alpha-Man-I - chrX_28_10315001 chrX_10315001 RAL-307_125b 3841 chrX 10335265 10335328 chrX 10335425 10335488 24 158 8.0 10.5 9.2 2.4 223 chrX 10335265 intron CG43740 + chrX 10335376 intron CG43740 + chrX 10335488 intron CG43740 + chrX_24_10335001 chrX_10335001 RAL-307_125b 3842 chrX 10348754 10348815 chrX 10356369 10356430 springer 12 7614 15.5 5.0 10.2 1.1 7676 chrX 10348754 intergenic snoRNA:U3:9B + chrX 10352592 intergenic not near genes chrX 10356430 intergenic l(1)G0289 - chrX_12_10350001 chrX_10350001 RAL-307_125b 3843 chrX 10440660 10440685 chrX 10440789 10440814 8 128 13.0 9.0 11.0 0.7 154 chrX 10440660 intron CG32683 - chrX 10440737 intron CG32683 - chrX 10440814 intron CG32683 - chrX_8_10440001 chrX_10440001 RAL-307_125b 3844 chrX 10440686 10440698 chrX 10440783 10440784 9 119 11.0 7.5 9.2 0.9 98 chrX 10440686 intron CG32683 - chrX 10440735 intron CG32683 - chrX 10440784 intron CG32683 - chrX_9_10440001 chrX_10440001 RAL-307_125b 3845 chrX 10550286 10550366 chrX 10550414 10550472 35 127 8.5 6.5 7.5 4.1 186 chrX 10550286 intron spri - chrX 10550379 intron spri - chrX 10550472 intron spri - chrX_35_10550001 chrX_10550001 RAL-307_125b 3846 chrX 10550826 10550880 chrX 10552327 10552356 hobo 17 1505 6.5 6.5 6.5 2.3 1530 chrX 10550826 intron spri - chrX 10551591 intron spri - chrX 10552356 intron spri - chrX_17_10550001 chrX_10550001 RAL-307_125b 3847 chrX 10686005 10686027 chrX 10691192 10691214 roo 15 5186 16.0 0.0 8.0 1.7 5209 chrX 10686005 intron X11Lbeta + chrX 10688610 intron X11Lbeta + chrX 10691214 intron X11Lbeta + chrX_15_10685001 chrX_10685001 RAL-307_125b 3848 chrX 10686028 10686081 chrX 10691189 10691268 roo 21 5184 6.5 0.0 3.2 5.0 5240 chrX 10686028 intron X11Lbeta + chrX 10688648 intron X11Lbeta + chrX 10691268 intron X11Lbeta + chrX_21_10685001 chrX_10685001 RAL-307_125b 3849 chrX 10772633 10772679 chrX 10772766 10772781 13 128 10.5 8.5 9.5 1.2 148 chrX 10772633 intron CG15211 + chrX 10772707 intron CG15211 + chrX 10772781 intron CG15211 + chrX_13_10770001 chrX_10770001 RAL-307_125b 3850 chrX 10772681 10772698 chrX 10772763 10772830 Tirant 7 125 7.5 8.0 7.8 0.8 149 chrX 10772681 intron CG15211 + chrX 10772756 intron CG15211 + chrX 10772830 intron CG15211 + chrX_7_10770001 chrX_10770001 RAL-307_125b 3851 chrX 10803009 10803049 chrX 10803125 10803183 16 129 14.5 11.5 13.0 1.1 174 chrX 10803009 intron Imp - chrX 10803096 intron Imp - chrX 10803183 intron Imp - chrX_16_10800001 chrX_10800001 RAL-307_125b 3852 chrX 11038496 11038558 chrX 11038935 11038990 4 432 3.5 7.0 5.2 0.6 494 chrX 11038496 intron CG42339 - chrX 11038743 intron CG42339 - chrX 11038990 intron CG42339 - chrX_4_11035001 chrX_11035001 RAL-307_125b 3853 chrX 11062408 11062468 chrX 11062548 11062613 17 143 7.5 9.0 8.2 1.8 205 chrX 11062408 exon CG1537 - chrX 11062510 intron CG1537 - chrX 11062613 intron CG1537 - chrX_17_11060001 chrX_11060001 RAL-307_125b 3854 chrX 11069117 11069176 chrX 11069310 11069327 16 189 4.0 2.5 3.2 3.8 210 chrX 11069117 intergenic not near genes chrX 11069222 intergenic not near genes chrX 11069327 intergenic not near genes chrX_16_11065001 chrX_11065001 RAL-307_125b 3855 chrX 11095955 11096019 chrX 11103107 11103171 HMS-Beagle 22 7152 8.0 10.5 9.2 2.2 7216 chrX 11095955 intergenic not near genes chrX 11099563 intergenic not near genes chrX 11103171 intron CG42249 + chrX_22_11095001 chrX_11095001 RAL-307_125b 3856 chrX 11141988 11142068 chrX 11142137 11142194 17 133 0.0 4.5 2.2 5.3 206 chrX 11141988 intergenic CG15199 - chrX 11142091 intergenic CG15199 -,CG15202 + chrX 11142194 intergenic CG15202 +,CG15199 - chrX_17_11140001 chrX_11140001 RAL-307_125b 3857 chrX 11165830 11165901 chrX 11166210 11166283 13 382 6.0 5.5 5.8 1.9 453 chrX 11165830 intergenic not near genes chrX 11166056 intergenic not near genes chrX 11166283 intergenic not near genes chrX_13_11165001 chrX_11165001 RAL-307_125b 3858 chrX 11184225 11184257 chrX 11189334 11189386 flea 8 5124 7.5 9.5 8.5 0.8 5161 chrX 11184225 intergenic not near genes chrX 11186806 intergenic not near genes chrX 11189386 intergenic not near genes chrX_8_11185001 chrX_11185001 RAL-307_125b 3859 chrX 11191844 11191915 chrX 11191981 11192040 11 136 5.5 6.0 5.8 1.6 196 chrX 11191844 intergenic not near genes chrX 11191942 intergenic not near genes chrX 11192040 intergenic not near genes chrX_11_11190001 chrX_11190001 RAL-307_125b 3860 chrX 11240472 11240508 chrX 11241010 11241041 297 4 533 3.0 10.0 6.5 0.5 569 chrX 11240472 intron CG44422 - chrX 11240756 intron CG44422 - chrX 11241041 intron CG44422 - chrX_4_11240001 chrX_11240001 RAL-307_125b 3861 chrX 11268541 11268575 chrX 11270071 11270115 hopper2 11 1541 0.5 8.5 4.5 2.0 1574 chrX 11268541 intron CG44422 - chrX 11269328 intron CG44422 - chrX 11270115 intron CG44422 - chrX_11_11265001 chrX_11265001 RAL-307_125b 3862 chrX 11268580 11268596 chrX 11270066 11270078 hopper2 4 1512 0.5 7.5 4.0 0.8 1498 chrX 11268580 intron CG44422 - chrX 11269329 intron CG44422 - chrX 11270078 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-307_125b 3863 chrX 11292949 11292969 chrX 11293075 11293095 10 126 15.0 0.5 7.8 1.1 146 chrX 11292949 intron CG44422 - chrX 11293022 intron CG44422 - chrX 11293095 intron CG44422 - chrX_10_11290001 chrX_11290001 RAL-307_125b 3864 chrX 11312014 11312082 chrX 11319417 11319485 Stalker2 13 7399 8.0 4.5 6.2 1.8 7471 chrX 11312014 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319485 intergenic not near genes chrX_13_11315001 chrX_11315001 RAL-307_125b 3865 chrX 11461837 11461873 chrX 11462271 11462307 14 434 3.0 7.5 5.2 2.3 470 chrX 11461837 intron CG43155 + chrX 11462072 intron CG43155 + chrX 11462307 intron CG43155 + chrX_14_11460001 chrX_11460001 RAL-307_125b 3866 chrX 11534997 11535038 chrX 11541517 11541558 Burdock 17 6519 11.5 10.0 10.8 1.4 6561 chrX 11534997 intron Drak + chrX 11538278 intron Drak + chrX 11541558 intron Drak + chrX_17_11535001 chrX_11535001 RAL-307_125b 3867 chrX 11535039 11535046 chrX 11541514 11541566 Burdock 5 6510 11.0 9.5 10.2 0.4 6527 chrX 11535039 intron Drak + chrX 11538302 intron Drak + chrX 11541566 intron Drak + chrX_5_11535001 chrX_11535001 RAL-307_125b 3868 chrX 11558232 11558242 chrX 11558365 11558376 4 133 21.0 1.5 11.2 0.3 144 chrX 11558232 intron CG1572 - chrX 11558304 intron CG1572 - chrX 11558376 intron CG1572 - chrX_4_11555001 chrX_11555001 RAL-307_125b 3869 chrX 11558245 11558276 chrX 11558364 11558372 8 122 12.0 1.5 6.8 1.0 127 chrX 11558245 intron CG1572 - chrX 11558308 intron CG1572 - chrX 11558372 intron CG1572 - chrX_8_11555001 chrX_11555001 RAL-307_125b 3870 chrX 11633372 11633436 chrX 11640476 11640513 297 24 7102 15.0 11.0 13.0 1.7 7141 chrX 11633372 intron Ptp10D + chrX 11636942 intron Ptp10D + chrX 11640513 intron Ptp10D + chrX_24_11635001 chrX_11635001 RAL-307_125b 3871 chrX 11645071 11645117 chrX 11648290 11648336 NOF 9 3219 10.5 6.5 8.5 0.9 3265 chrX 11645071 intron Ptp10D + chrX 11646704 intron Ptp10D + chrX 11648336 intron Ptp10D + chrX_9_11645001 chrX_11645001 RAL-307_125b 3872 chrX 11719829 11719888 chrX 11719959 11720018 27 128 16.5 17.0 16.8 1.5 189 chrX 11719829 3` UTR prtp + chrX 11719924 intergenic prtp +,Tango10 + chrX 11720018 intergenic prtp +,Tango10 + chrX_27_11715001 chrX_11715001 RAL-307_125b 3873 chrX 11761972 11761999 chrX 11762101 11762128 4 128 6.5 8.0 7.2 0.5 156 chrX 11761972 intron m + chrX 11762050 intron m + chrX 11762128 intron m + chrX_4_11760001 chrX_11760001 RAL-307_125b 3874 chrX 11782897 11782915 chrX 11783027 11783045 7 130 9.0 12.0 10.5 0.6 148 chrX 11782897 intergenic not near genes chrX 11782971 intergenic not near genes chrX 11783045 intergenic not near genes chrX_7_11780001 chrX_11780001 RAL-307_125b 3875 chrX 11798970 11799027 chrX 11799106 11799163 26 134 14.0 10.5 12.2 2.0 193 chrX 11798970 intron CkIIbeta + chrX 11799066 intron CkIIbeta + chrX 11799163 intron CkIIbeta + chrX_26_11795001 chrX_11795001 RAL-307_125b 3876 chrX 11801539 11801543 chrX 11801671 11801675 4 132 15.0 6.0 10.5 0.3 136 chrX 11801539 3` UTR CkIIbeta + chrX 11801607 intergenic CkIIbeta +,Hsc70-3 - chrX 11801675 intergenic Hsc70-3 -,CkIIbeta + chrX_4_11800001 chrX_11800001 RAL-307_125b 3877 chrX 11804623 11804690 chrX 11804777 11804844 31 154 8.0 6.0 7.0 3.9 221 chrX 11804623 intron Hsc70-3 - chrX 11804734 intron Hsc70-3 - chrX 11804844 intron Hsc70-3 - chrX_31_11800001 chrX_11800001 RAL-307_125b 3878 chrX 11922313 11922380 chrX 11922496 11922563 37 181 8.0 7.0 7.5 4.4 250 chrX 11922313 exon Sclp - chrX 11922438 intron Sclp - chrX 11922563 intron Sclp - chrX_37_11920001 chrX_11920001 RAL-307_125b 3879 chrX 12094017 12094024 chrX 12094154 12094160 4 137 11.5 12.0 11.8 0.3 143 chrX 12094017 intron,intron CR43960 +,Ten-a + chrX 12094088 intron,intron CR43960 +,Ten-a + chrX 12094160 intron,intron CR43960 +,Ten-a + chrX_4_12090001 chrX_12090001 RAL-307_125b 3880 chrX 12094029 12094065 chrX 12094146 12094184 10 134 2.5 11.0 6.8 1.3 155 chrX 12094029 intron,intron CR43960 +,Ten-a + chrX 12094106 intron,intron CR43960 +,Ten-a + chrX 12094184 intron,intron CR43960 +,Ten-a + chrX_10_12090001 chrX_12090001 RAL-307_125b 3881 chrX 12168103 12168121 chrX 12173595 12173613 I-element 4 5492 8.5 1.0 4.8 0.7 5510 chrX 12168103 intron Ten-a + chrX 12170858 intron Ten-a + chrX 12173613 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-307_125b 3882 chrX 12184234 12184263 chrX 12184369 12184391 7 133 10.5 9.5 10.0 0.6 157 chrX 12184234 intron Ten-a + chrX 12184312 intron Ten-a + chrX 12184391 intron Ten-a + chrX_7_12180001 chrX_12180001 RAL-307_125b 3883 chrX 12191546 12191584 chrX 12191684 12191722 28 138 5.5 12.5 9.0 2.8 176 chrX 12191546 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191722 intron Ten-a + chrX_28_12190001 chrX_12190001 RAL-307_125b 3884 chrX 12246922 12246964 chrX 12247068 12247110 12 145 10.0 0.5 5.2 1.9 188 chrX 12246922 intron Ten-a + chrX 12247016 intron Ten-a + chrX 12247110 intron Ten-a + chrX_12_12245001 chrX_12245001 RAL-307_125b 3885 chrX 12301929 12301978 chrX 12303275 12303275 X-element 8 1332 6.0 3.5 4.8 1.4 1346 chrX 12301929 intron Ten-a + chrX 12302602 intron Ten-a + chrX 12303275 intron Ten-a + chrX_8_12300001 chrX_12300001 RAL-307_125b 3886 chrX 12350737 12350749 chrX 12350868 12350874 4 130 13.0 0.5 6.8 0.5 137 chrX 12350737 intergenic not near genes chrX 12350806 intergenic not near genes chrX 12350874 intergenic not near genes chrX_4_12350001 chrX_12350001 RAL-307_125b 3887 chrX 12350752 12350785 chrX 12350862 12350922 15 124 9.5 0.5 5.0 2.5 170 chrX 12350752 intergenic not near genes chrX 12350837 intergenic not near genes chrX 12350922 intergenic not near genes chrX_15_12350001 chrX_12350001 RAL-307_125b 3888 chrX 12356867 12356873 chrX 12357000 12357025 6 152 3.0 14.0 8.5 0.6 158 chrX 12356867 intergenic not near genes chrX 12356946 intergenic not near genes chrX 12357025 intergenic not near genes chrX_6_12355001 chrX_12355001 RAL-307_125b 3889 chrX 12375442 12375500 chrX 12375590 12375642 13 148 8.0 3.0 5.5 2.0 200 chrX 12375442 intergenic Ir11a - chrX 12375542 intergenic Ir11a - chrX 12375642 exon Ir11a - chrX_13_12375001 chrX_12375001 RAL-307_125b 3890 chrX 12381847 12381896 chrX 12385788 12385826 flea 10 3928 8.5 8.5 8.5 1.1 3979 chrX 12381847 intergenic not near genes chrX 12383836 intergenic not near genes chrX 12385826 intergenic not near genes chrX_10_12380001 chrX_12380001 RAL-307_125b 3891 chrX 12421187 12421234 chrX 12421322 12421369 20 134 6.0 4.5 5.2 3.2 182 chrX 12421187 intergenic not near genes chrX 12421278 intergenic not near genes chrX 12421369 intergenic not near genes chrX_20_12420001 chrX_12420001 RAL-307_125b 3892 chrX 12449811 12449841 chrX 12449962 12449992 12 150 12.0 4.0 8.0 1.3 181 chrX 12449811 intron Pkcdelta + chrX 12449902 intron Pkcdelta + chrX 12449992 intron Pkcdelta + chrX_12_12445001 chrX_12445001 RAL-307_125b 3893 chrX 12492950 12492960 chrX 13057293 13057303 11 564343 13.5 37.5 25.5 0.4 564353 chrX 12492950 3` UTR Lsp1alpha + chrX 12775126 3` UTR CG32647 - chrX 13057303 intron rad + chrX_11_12775001 chrX_12775001 RAL-307_125b 3894 chrX 12511274 12511347 chrX 12511406 12511481 13 132 0.5 7.5 4.0 2.6 207 chrX 12511274 intron CG2556 + chrX 12511378 intron CG2556 + chrX 12511481 intron CG2556 + chrX_13_12510001 chrX_12510001 RAL-307_125b 3895 chrX 12528814 12528893 chrX 12528940 12528949 11 120 7.0 8.0 7.5 1.3 135 chrX 12528814 intron CG43921 - chrX 12528882 intron CG43921 - chrX 12528949 intron CG43921 - chrX_11_12525001 chrX_12525001 RAL-307_125b 3896 chrX 12533768 12533784 chrX 12533884 12533911 5 122 0.0 8.0 4.0 1.0 143 chrX 12533768 intron CG43921 - chrX 12533840 intron CG43921 - chrX 12533911 intron CG43921 - chrX_5_12530001 chrX_12530001 RAL-307_125b 3897 chrX 12635378 12635424 chrX 12635513 12635559 12 135 8.5 5.5 7.0 1.5 181 chrX 12635378 intron Tomosyn + chrX 12635468 intron Tomosyn + chrX 12635559 intron Tomosyn + chrX_12_12635001 chrX_12635001 RAL-307_125b 3898 chrX 5190119 5190144 chrX 12649913 12649914 4 7459784 17.5 22.5 20.0 0.2 7459795 chrX 5190119 intron,intron CG15465 +,rg + chrX 8920016 intron,3` UTR rdgA +,CR44111 - chrX 12649914 intron Tomosyn + chrX_4_8920001 chrX_8920001 RAL-307_125b 3899 chrX 5190126 5190145 chrX 12649915 12649915 7 7459780 18.0 22.5 20.2 0.3 7459789 chrX 5190126 intron,intron CG15465 +,rg + chrX 8920020 intron,3` UTR rdgA +,CR44111 - chrX 12649915 intron Tomosyn + chrX_7_8920001 chrX_8920001 RAL-307_125b 3900 chrX 12754654 12754680 chrX 12754892 12754918 12 235 6.5 11.5 9.0 1.2 264 chrX 12754654 intergenic CR44619 + chrX 12754786 intergenic CR44619 + chrX 12754918 intergenic CR44619 + chrX_12_12750001 chrX_12750001 RAL-307_125b 3901 chrX 12808444 12808466 chrX 12808586 12808607 4 142 7.5 10.0 8.8 0.4 163 chrX 12808444 intron Pde9 - chrX 12808526 intron Pde9 - chrX 12808607 intron Pde9 - chrX_4_12805001 chrX_12805001 RAL-307_125b 3902 chrX 12839879 12839917 chrX 12840254 12840293 12 371 12.5 13.0 12.8 0.9 414 chrX 12839879 intron Pde9 - chrX 12840086 intron Pde9 - chrX 12840293 intron Pde9 - chrX_12_12840001 chrX_12840001 RAL-307_125b 3903 chrX 12839920 12839950 chrX 12840245 12840297 13 358 4.5 11.5 8.0 1.4 377 chrX 12839920 intron Pde9 - chrX 12840108 intron Pde9 - chrX 12840297 intron Pde9 - chrX_13_12840001 chrX_12840001 RAL-307_125b 3904 chrX 12881831 12881841 chrX 12882019 12882029 7 188 9.5 16.5 13.0 0.5 198 chrX 12881831 intron Pde9 - chrX 12881930 intron Pde9 - chrX 12882029 intron Pde9 - chrX_7_12880001 chrX_12880001 RAL-307_125b 3905 chrX 12930546 12930601 chrX 12937712 12937767 HMS-Beagle 18 7165 10.0 14.0 12.0 1.4 7221 chrX 12930546 intron fne + chrX 12934156 intron fne + chrX 12937767 intron fne + chrX_18_12930001 chrX_12930001 RAL-307_125b 3906 chrX 12953842 12953920 chrX 12954030 12954109 18 187 1.0 4.0 2.5 5.1 267 chrX 12953842 intron hec - chrX 12953976 intron hec - chrX 12954109 intron hec - chrX_18_12950001 chrX_12950001 RAL-307_125b 3907 chrX 13061318 13061360 chrX 13061473 13061521 16 156 11.5 4.0 7.8 1.8 203 chrX 13061318 intron rad + chrX 13061420 intron rad + chrX 13061521 intron rad + chrX_16_13060001 chrX_13060001 RAL-307_125b 3908 chrX 13061364 13061375 chrX 13061468 13061536 8 138 6.5 4.0 5.2 1.3 172 chrX 13061364 intron rad + chrX 13061450 intron rad + chrX 13061536 intron rad + chrX_8_13060001 chrX_13060001 RAL-307_125b 3909 chrX 13099076 13099112 chrX 13099212 13099254 9 141 3.0 9.5 6.2 1.2 178 chrX 13099076 intron CG43313 - chrX 13099165 intron CG43313 - chrX 13099254 intron CG43313 - chrX_9_13095001 chrX_13095001 RAL-307_125b 3910 chrX 13104039 13104095 chrX 13104170 13104226 15 131 18.0 0.5 9.2 1.5 187 chrX 13104039 intron CG43313 - chrX 13104132 intron CG43313 - chrX 13104226 intron CG43313 - chrX_15_13100001 chrX_13100001 RAL-307_125b 3911 chrX 13147831 13147851 chrX 13147963 13147983 6 130 16.5 6.5 11.5 0.5 152 chrX 13147831 intron CG32645 + chrX 13147907 intron CG32645 + chrX 13147983 intron CG32645 + chrX_6_13145001 chrX_13145001 RAL-307_125b 3912 chrX 13147853 13147908 chrX 13147962 13148008 28 125 7.0 6.5 6.8 3.6 155 chrX 13147853 intron CG32645 + chrX 13147930 intron CG32645 + chrX 13148008 intron CG32645 + chrX_28_13145001 chrX_13145001 RAL-307_125b 3913 chrX 13168523 13168570 chrX 13168674 13168717 14 147 3.0 3.5 3.2 3.3 194 chrX 13168523 intron CG34411 - chrX 13168620 intron CG34411 - chrX 13168717 intron CG34411 - chrX_14_13165001 chrX_13165001 RAL-307_125b 3914 chrX 13172299 13172382 chrX 13172425 13172508 32 124 9.5 11.0 10.2 2.9 209 chrX 13172299 intron CG34411 - chrX 13172404 intron CG34411 - chrX 13172508 exon CG34411 - chrX_32_13170001 chrX_13170001 RAL-307_125b 3915 chrX 13209989 13210057 chrX 13210134 13210206 11 144 4.5 8.0 6.2 1.5 217 chrX 13209989 intron sno - chrX 13210098 intron sno - chrX 13210206 intron sno - chrX_11_13210001 chrX_13210001 RAL-307_125b 3916 chrX 13236829 13236898 chrX 13236961 13237029 20 132 4.0 9.0 6.5 2.7 200 chrX 13236829 intron mew - chrX 13236929 intron mew - chrX 13237029 intron mew - chrX_20_13235001 chrX_13235001 RAL-307_125b 3917 chrX 13272134 13272180 chrX 13272256 13272307 22 124 11.5 8.5 10.0 2.0 173 chrX 13272134 intron HDAC4 - chrX 13272220 intron HDAC4 - chrX 13272307 intron HDAC4 - chrX_22_13270001 chrX_13270001 RAL-307_125b 3918 chrX 13278110 13278184 chrX 13278243 13278317 20 133 9.5 10.0 9.8 1.9 207 chrX 13278110 intron HDAC4 - chrX 13278214 intron HDAC4 - chrX 13278317 intron HDAC4 - chrX_20_13275001 chrX_13275001 RAL-307_125b 3919 chrX 13280096 13280133 chrX 13280309 13280315 6 200 9.0 4.0 6.5 0.8 219 chrX 13280096 intron HDAC4 - chrX 13280206 intron HDAC4 - chrX 13280315 intron HDAC4 - chrX_6_13280001 chrX_13280001 RAL-307_125b 3920 chrX 13329263 13329275 chrX 13329412 13329424 7 149 13.5 1.5 7.5 0.8 161 chrX 13329263 3` UTR IP3K2 + chrX 13329344 intergenic IP3K2 +,Jafrac1 + chrX 13329424 intergenic IP3K2 +,Jafrac1 + chrX_7_13325001 chrX_13325001 RAL-307_125b 3921 chrX 13329276 13329361 chrX 13329410 13329497 11 143 1.0 1.5 1.2 5.0 221 chrX 13329276 3` UTR IP3K2 + chrX 13329386 intergenic IP3K2 +,Jafrac1 + chrX 13329497 intergenic IP3K2 +,Jafrac1 + chrX_11_13325001 chrX_13325001 RAL-307_125b 3922 chrX 13374797 13374865 chrX 13374926 13374960 41 126 7.5 8.0 7.8 4.7 163 chrX 13374797 intron CG1640 + chrX 13374878 intron CG1640 + chrX 13374960 intron CG1640 + chrX_41_13370001 chrX_13370001 RAL-307_125b 3923 chrX 13401436 13401508 chrX 13401838 13401910 jockey 15 400 4.5 3.0 3.8 3.1 474 chrX 13401436 intergenic CG1673 +,CG12725 - chrX 13401673 intergenic CG12725 -,CG1673 + chrX 13401910 3` UTR CG12725 - chrX_15_13400001 chrX_13400001 RAL-307_125b 3924 chrX 13421446 13421456 chrX 13421580 13421590 4 134 0.0 9.5 4.8 0.7 144 chrX 13421446 intergenic Set2 + chrX 13421518 intergenic Set2 + chrX 13421590 intergenic not near genes chrX_4_13420001 chrX_13420001 RAL-307_125b 3925 chrX 13429410 13429482 chrX 13430609 13430681 jockey 11 1199 0.0 7.5 3.8 2.3 1271 chrX 13429410 intergenic not near genes chrX 13430046 intergenic not near genes chrX 13430681 intergenic not near genes chrX_11_13430001 chrX_13430001 RAL-307_125b 3926 chrX 13443383 13443412 chrX 13443490 13443534 12 116 7.0 8.5 7.8 1.4 151 chrX 13443383 intergenic not near genes chrX 13443458 intergenic not near genes chrX 13443534 intergenic not near genes chrX_12_13440001 chrX_13440001 RAL-307_125b 3927 chrX 13463607 13463663 chrX 13469234 13469290 mdg3 26 5626 9.5 14.0 11.8 2.0 5683 chrX 13463607 intron Neto + chrX 13466448 intron Neto + chrX 13469290 intron Neto + chrX_26_13465001 chrX_13465001 RAL-307_125b 3928 chrX 13471373 13471390 chrX 13471506 13471523 9 131 7.0 15.5 11.2 0.7 150 chrX 13471373 intron Neto + chrX 13471448 intron Neto + chrX 13471523 intron Neto + chrX_9_13470001 chrX_13470001 RAL-307_125b 3929 chrX 13507287 13507336 chrX 13507387 13507432 14 114 1.0 3.0 2.0 4.7 145 chrX 13507287 intron Neto + chrX 13507360 intron Neto + chrX 13507432 intron Neto + chrX_14_13505001 chrX_13505001 RAL-307_125b 3930 chrX 13550440 13550471 chrX 13550572 13550603 11 132 10.0 1.0 5.5 1.7 163 chrX 13550440 intergenic not near genes chrX 13550522 intergenic not near genes chrX 13550603 intergenic not near genes chrX_11_13550001 chrX_13550001 RAL-307_125b 3931 chrX 13734050 13734109 chrX 13734196 13734236 9 138 9.5 9.0 9.2 0.9 186 chrX 13734050 intron g - chrX 13734143 intron g - chrX 13734236 intron g - chrX_9_13730001 chrX_13730001 RAL-307_125b 3932 chrX 13875913 13875918 chrX 13876041 13876047 5 129 13.0 0.5 6.8 0.6 134 chrX 13875913 intron mamo - chrX 13875980 intron mamo - chrX 13876047 intron mamo - chrX_5_13875001 chrX_13875001 RAL-307_125b 3933 chrX 13875921 13875988 chrX 13876039 13876144 6 141 4.0 0.5 2.2 1.9 223 chrX 13875921 intron mamo - chrX 13876032 intron mamo - chrX 13876144 intron mamo - chrX_6_13875001 chrX_13875001 RAL-307_125b 3934 chrX 13908747 13908810 chrX 13908875 13908888 7 112 10.0 10.5 10.2 0.6 141 chrX 13908747 intron mamo - chrX 13908818 intron mamo - chrX 13908888 intron mamo - chrX_7_13905001 chrX_13905001 RAL-307_125b 3935 chrX 13934252 13934314 chrX 13934384 13934421 17 131 5.5 9.0 7.2 2.1 169 chrX 13934252 intron mamo - chrX 13934336 intron mamo - chrX 13934421 intron mamo - chrX_17_13930001 chrX_13930001 RAL-307_125b 3936 chrX 13937929 13937983 chrX 13941250 13941287 I-element 17 3320 7.0 6.0 6.5 2.3 3358 chrX 13937929 intron mamo - chrX 13939608 intron mamo - chrX 13941287 intron mamo - chrX_17_13935001 chrX_13935001 RAL-307_125b 3937 chrX 13975823 13975895 chrX 13975951 13976022 11 123 0.0 7.0 3.5 2.4 199 chrX 13975823 intron mamo - chrX 13975922 intron mamo - chrX 13976022 intron mamo - chrX_11_13975001 chrX_13975001 RAL-307_125b 3938 chrX 14104994 14105046 chrX 14114171 14114247 roo 21 9192 7.5 3.5 5.5 3.2 9253 chrX 14104994 intergenic not near genes chrX 14109620 intergenic not near genes chrX 14114247 5` UTR CR44657 + chrX_21_14105001 chrX_14105001 RAL-307_125b 3939 chrX 14118413 14118484 chrX 14118553 14118608 17 136 0.0 3.0 1.5 6.8 195 chrX 14118413 intergenic not near genes chrX 14118510 intergenic not near genes chrX 14118608 intergenic not near genes chrX_17_14115001 chrX_14115001 RAL-307_125b 3940 chrX 14131433 14131516 chrX 14131570 14131647 20 118 3.0 4.5 3.8 4.2 214 chrX 14131433 intergenic not near genes chrX 14131540 intergenic not near genes chrX 14131647 intergenic not near genes chrX_20_14130001 chrX_14130001 RAL-307_125b 3941 chrX 14143360 14143429 chrX 14143486 14143560 13 130 8.0 5.5 6.8 1.7 200 chrX 14143360 intergenic not near genes chrX 14143460 intergenic not near genes chrX 14143560 intergenic not near genes chrX_13_14140001 chrX_14140001 RAL-307_125b 3942 chrX 14157549 14157618 chrX 14163256 14163325 297 8 5707 9.5 3.5 6.5 1.1 5776 chrX 14157549 intergenic not near genes chrX 14160437 intergenic not near genes chrX 14163325 intergenic not near genes chrX_8_14160001 chrX_14160001 RAL-307_125b 3943 chrX 14209416 14209489 chrX 14209557 14209628 28 140 11.5 7.5 9.5 2.7 212 chrX 14209416 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209522 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209628 intron,intron l(1)G0007 +,l(1)G0469 - chrX_28_14205001 chrX_14205001 RAL-307_125b 3944 chrX 14304039 14304062 chrX 14310307 14310330 17.6 6 6268 7.5 6.5 7.0 0.8 6291 chrX 14304039 intergenic not near genes chrX 14307184 intergenic not near genes chrX 14310330 intergenic not near genes chrX_6_14305001 chrX_14305001 RAL-307_125b 3945 chrX 14333281 14333313 chrX 14333387 14333445 6 117 7.0 6.5 6.8 0.8 164 chrX 14333281 intron dpr8 + chrX 14333363 intron dpr8 + chrX 14333445 intron dpr8 + chrX_6_14330001 chrX_14330001 RAL-307_125b 3946 chrX 14404965 14405027 chrX 14405093 14405130 26 126 7.5 4.5 6.0 3.7 165 chrX 14404965 intron dpr8 + chrX 14405048 intron dpr8 + chrX 14405130 intron dpr8 + chrX_26_14405001 chrX_14405001 RAL-307_125b 3947 chrX 14416266 14416317 chrX 14421083 14421135 F-element 19 4818 4.5 9.5 7.0 2.4 4869 chrX 14416266 intron dpr8 + chrX 14418700 intron dpr8 + chrX 14421135 intron dpr8 + chrX_19_14415001 chrX_14415001 RAL-307_125b 3948 chrX 14484920 14484984 chrX 14485059 14485122 18 137 0.0 3.5 1.8 6.4 202 chrX 14484920 intergenic not near genes chrX 14485021 intergenic not near genes chrX 14485122 intergenic not near genes chrX_18_14485001 chrX_14485001 RAL-307_125b 3949 chrX 14487796 14487851 chrX 14487924 14487953 18 136 3.5 5.0 4.2 3.5 157 chrX 14487796 intergenic not near genes chrX 14487874 intergenic not near genes chrX 14487953 intergenic not near genes chrX_18_14485001 chrX_14485001 RAL-307_125b 3950 chrX 14508407 14508476 chrX 14508594 14508629 7 181 2.5 4.5 3.5 1.6 222 chrX 14508407 intergenic not near genes chrX 14508518 intergenic not near genes chrX 14508629 intergenic not near genes chrX_7_14505001 chrX_14505001 RAL-307_125b 3951 chrX 14597699 14597750 chrX 14597816 14597877 15 119 1.0 4.5 2.8 3.9 178 chrX 14597699 intron CG9413 - chrX 14597788 intron CG9413 - chrX 14597877 intron CG9413 - chrX_15_14595001 chrX_14595001 RAL-307_125b 3952 chrX 14628144 14628213 chrX 14628285 14628318 30 129 5.5 6.5 6.0 4.3 174 chrX 14628144 intron NetA - chrX 14628231 intron NetA - chrX 14628318 intron NetA - chrX_30_14625001 chrX_14625001 RAL-307_125b 3953 chrX 14636418 14636448 chrX 14641909 14641935 I-element 11 5489 15.0 5.0 10.0 1.0 5517 chrX 14636418 intron NetA - chrX 14639176 intron NetA - chrX 14641935 intron NetA - chrX_11_14635001 chrX_14635001 RAL-307_125b 3954 chrX 14636450 14636489 chrX 14641904 14641969 I-element 16 5478 7.0 4.5 5.8 2.4 5519 chrX 14636450 intron NetA - chrX 14639210 intron NetA - chrX 14641969 intron NetA - chrX_16_14635001 chrX_14635001 RAL-307_125b 3955 chrX 14740308 14740347 chrX 14740444 14740483 22 136 0.0 17.5 8.8 2.2 175 chrX 14740308 intron NetB - chrX 14740396 intron NetB - chrX 14740483 intron NetB - chrX_22_14740001 chrX_14740001 RAL-307_125b 3956 chrX 14777990 14778049 chrX 14782837 14782896 Doc 33 4846 13.0 12.0 12.5 2.4 4906 chrX 14777990 intergenic CG5347 + chrX 14780443 intergenic not near genes chrX 14782896 intergenic Ag5r2 - chrX_33_14780001 chrX_14780001 RAL-307_125b 3957 chrX 14806709 14806788 chrX 14806847 14806928 18 138 3.0 0.0 1.5 7.2 219 chrX 14806709 intron rut - chrX 14806818 intron rut - chrX 14806928 intron rut - chrX_18_14805001 chrX_14805001 RAL-307_125b 3958 chrX 14810160 14810175 chrX 14810288 14810297 7 127 5.0 0.0 2.5 2.0 137 chrX 14810160 intron rut - chrX 14810228 intron rut - chrX 14810297 intron rut - chrX_7_14810001 chrX_14810001 RAL-307_125b 3959 chrX 14813685 14813767 chrX 14813813 14813894 20 127 5.5 8.0 6.8 2.6 209 chrX 14813685 intron rut - chrX 14813790 intron rut - chrX 14813894 intron rut - chrX_20_14810001 chrX_14810001 RAL-307_125b 3960 chrX 14818719 14818794 chrX 14823968 14824048 copia 20 5252 6.5 8.0 7.2 2.4 5329 chrX 14818719 intron rut - chrX 14821384 intron rut - chrX 14824048 intron rut - chrX_20_14820001 chrX_14820001 RAL-307_125b 3961 chrX 14936793 14936880 chrX 14946114 14946187 roo 35 9318 0.5 6.5 3.5 7.8 9394 chrX 14936793 intron pdgy - chrX 14941490 intron pdgy - chrX 14946187 intron pdgy - chrX_35_14940001 chrX_14940001 RAL-307_125b 3962 chrX 14968045 14968100 chrX 14968158 14968189 20 126 0.0 8.0 4.0 4.0 144 chrX 14968045 intron eag + chrX 14968117 intron eag + chrX 14968189 intron eag + chrX_20_14965001 chrX_14965001 RAL-307_125b 3963 chrX 14974822 14974842 chrX 14974963 14974984 8 140 4.5 19.5 12.0 0.6 162 chrX 14974822 intron eag + chrX 14974903 intron eag + chrX 14974984 intron eag + chrX_8_14970001 chrX_14970001 RAL-307_125b 3964 chrX 15034060 15034075 chrX 15041643 15041658 rover 4 7583 7.0 14.5 10.8 0.3 7598 chrX 15034060 intron,3` UTR hiw -,be + chrX 15037859 intron,intron hiw -,be + chrX 15041658 intron,3` UTR hiw -,be + chrX_4_15035001 chrX_15035001 RAL-307_125b 3965 chrX 15059134 15059164 chrX 15059290 15059320 7 155 7.5 9.0 8.2 0.8 186 chrX 15059134 exon hiw - chrX 15059227 intron hiw - chrX 15059320 intron hiw - chrX_7_15055001 chrX_15055001 RAL-307_125b 3966 chrX 15062480 15062508 chrX 15062628 15062656 6 148 11.0 11.0 11.0 0.5 176 chrX 15062480 intron hiw - chrX 15062568 intron hiw - chrX 15062656 intron hiw - chrX_6_15060001 chrX_15060001 RAL-307_125b 3967 chrX 15212215 15212286 chrX 15212367 15212433 29 144 9.0 9.5 9.2 2.8 218 chrX 15212215 intergenic not near genes chrX 15212324 intergenic not near genes chrX 15212433 intergenic not near genes chrX_29_15210001 chrX_15210001 RAL-307_125b 3968 chrX 15209702 15209740 chrX 15212732 15212795 24 3034 47.0 50.5 48.8 0.5 3093 chrX 15209702 intergenic not near genes chrX 15211248 exon CG5662 + chrX 15212795 intergenic not near genes chrX_24_15210001 chrX_15210001 RAL-307_125b 3969 chrX 15228454 15228525 chrX 15228750 15228821 29 296 6.0 5.5 5.8 4.3 367 chrX 15228454 intergenic CG9101 - chrX 15228638 intergenic CG9101 - chrX 15228821 3` UTR CG9101 - chrX_29_15225001 chrX_15225001 RAL-307_125b 3970 chrX 15247943 15248242 chrX 15248071 15248363 9 126 8.5 14.0 11.2 0.7 420 chrX 15247943 intergenic not near genes chrX 15248153 intergenic not near genes chrX 15248363 intergenic not near genes chrX_9_15245001 chrX_15245001 RAL-307_125b 3971 chrX 15265831 15265861 chrX 15265964 15265974 7 122 10.0 5.0 7.5 0.8 143 chrX 15265831 intergenic not near genes chrX 15265902 intergenic not near genes chrX 15265974 intergenic not near genes chrX_7_15265001 chrX_15265001 RAL-307_125b 3972 chrX 15273690 15273729 chrX 15274876 15274945 1360 10 1204 7.0 5.5 6.2 1.4 1255 chrX 15273690 intergenic not near genes chrX 15274318 intergenic not near genes chrX 15274945 intergenic not near genes chrX_10_15270001 chrX_15270001 RAL-307_125b 3973 chrX 15277589 15277662 chrX 15277724 15277797 39 130 6.0 4.0 5.0 6.5 208 chrX 15277589 intergenic not near genes chrX 15277693 intergenic not near genes chrX 15277797 intergenic not near genes chrX_39_15275001 chrX_15275001 RAL-307_125b 3974 chrX 15326687 15326715 chrX 15326935 15326963 I-element 11 248 0.5 9.5 5.0 1.8 276 chrX 15326687 3` UTR Top1 + chrX 15326825 3` UTR Top1 + chrX 15326963 3` UTR Top1 + chrX_11_15325001 chrX_15325001 RAL-307_125b 3975 chrX 15369786 15369857 chrX 15369919 15369949 21 127 8.0 8.0 8.0 2.3 163 chrX 15369786 intron acj6 - chrX 15369868 intron acj6 - chrX 15369949 intron acj6 - chrX_21_15365001 chrX_15365001 RAL-307_125b 3976 chrX 15413016 15413049 chrX 15417360 15417401 Juan 7 4347 11.0 0.5 5.8 1.0 4385 chrX 15413016 intron Cngl - chrX 15415208 intron Cngl - chrX 15417401 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-307_125b 3977 chrX 15421874 15421947 chrX 15423435 15423508 pogo 15 1561 6.0 8.5 7.2 1.8 1634 chrX 15421874 intron Cngl - chrX 15422691 intron Cngl - chrX 15423508 intron Cngl - chrX_15_15420001 chrX_15420001 RAL-307_125b 3978 chrX 15519752 15519817 chrX 15519880 15519912 19 120 4.5 2.5 3.5 4.2 160 chrX 15519752 intron Ac13E - chrX 15519832 intron Ac13E - chrX 15519912 intron Ac13E - chrX_19_15515001 chrX_15515001 RAL-307_125b 3979 chrX 15536665 15536703 chrX 15536792 15536810 8 124 13.0 15.0 14.0 0.5 145 chrX 15536665 intron Ac13E - chrX 15536738 intron Ac13E - chrX 15536810 intron Ac13E - chrX_8_15535001 chrX_15535001 RAL-307_125b 3980 chrX 15565586 15565664 chrX 15565722 15565800 38 135 9.5 8.5 9.0 3.8 214 chrX 15565586 intergenic not near genes chrX 15565693 intergenic not near genes chrX 15565800 intergenic not near genes chrX_38_15565001 chrX_15565001 RAL-307_125b 3981 chrX 15589410 15589444 chrX 15589639 15589673 9 228 7.5 11.5 9.5 0.9 263 chrX 15589410 intron CG9220 - chrX 15589542 intron CG9220 - chrX 15589673 exon CG9220 - chrX_9_15585001 chrX_15585001 RAL-307_125b 3982 chrX 15669826 15669882 chrX 15669965 15670021 16 138 2.0 7.0 4.5 2.9 195 chrX 15669826 intron CG15646 - chrX 15669924 intron CG15646 - chrX 15670021 intron CG15646 - chrX_16_15665001 chrX_15665001 RAL-307_125b 3983 chrX 15680477 15680492 chrX 15680585 15680638 4 137 0.5 0.5 0.5 2.7 161 chrX 15680477 intergenic not near genes chrX 15680558 intergenic not near genes chrX 15680638 intergenic not near genes chrX_4_15680001 chrX_15680001 RAL-307_125b 3984 chrX 15681351 15681424 chrX 15681478 15681555 21 130 4.5 6.5 5.5 3.2 204 chrX 15681351 intergenic not near genes chrX 15681453 intergenic not near genes chrX 15681555 intergenic not near genes chrX_21_15680001 chrX_15680001 RAL-307_125b 3985 chrX 15696622 15696695 chrX 15696816 15696889 14 178 3.5 9.5 6.5 1.9 267 chrX 15696622 intergenic not near genes chrX 15696756 intergenic not near genes chrX 15696889 intergenic not near genes chrX_14_15695001 chrX_15695001 RAL-307_125b 3986 chrX 15697040 15697054 chrX 15840828 15840842 4 143786 13.5 38.0 25.8 0.1 143802 chrX 15697040 intergenic CG8128 + chrX 15768941 exon CG17209 + chrX 15840842 exon CG8565 + chrX_4_15765001 chrX_15765001 RAL-307_125b 3987 chrX 15750820 15750895 chrX 15750965 15751040 34 145 6.5 7.0 6.8 4.4 220 chrX 15750820 exon CG8239 + chrX 15750930 exon CG8239 + chrX 15751040 3` UTR CG8239 + chrX_34_15750001 chrX_15750001 RAL-307_125b 3988 chrX 15954813 15954834 chrX 15954966 15954978 5 146 16.5 31.0 23.8 0.2 165 chrX 15954813 intron mmd - chrX 15954896 intron mmd - chrX 15954978 intron mmd - chrX_5_15950001 chrX_15950001 RAL-307_125b 3989 chrX 15954811 15954848 chrX 15954979 15954992 10 150 14.5 35.0 24.8 0.4 181 chrX 15954811 intron mmd - chrX 15954902 intron mmd - chrX 15954992 intron mmd - chrX_10_15950001 chrX_15950001 RAL-307_125b 3990 chrX 15967273 15967280 chrX 15967415 15967422 8 142 0.0 0.0 0.0 8.0 149 chrX 15967273 intron mmd - chrX 15967348 intron mmd - chrX 15967422 intron mmd - chrX_8_15965001 chrX_15965001 RAL-307_125b 3991 chrX 16100507 16100586 chrX 16100636 16100716 19 130 10.0 10.0 10.0 1.7 209 chrX 16100507 intron,intron CG42353 -,CG42354 - chrX 16100612 intron,intron CG42353 -,CG42354 - chrX 16100716 intron,intron CG42353 -,CG42354 - chrX_19_16100001 chrX_16100001 RAL-307_125b 3992 chrX 16160247 16160303 chrX 16160373 16160428 12 126 5.5 4.5 5.0 2.0 181 chrX 16160247 intergenic not near genes chrX 16160338 intergenic not near genes chrX 16160428 intergenic not near genes chrX_12_16160001 chrX_16160001 RAL-307_125b 3993 chrX 16222746 16222754 chrX 16231146 16231154 roo 5 8400 0.0 8.5 4.2 1.0 8408 chrX 16222746 intergenic not near genes chrX 16226950 intergenic not near genes chrX 16231154 intergenic not near genes chrX_5_16225001 chrX_16225001 RAL-307_125b 3994 chrX 16222757 16222807 chrX 16231142 16231207 roo 21 8398 0.0 8.0 4.0 4.2 8450 chrX 16222757 intergenic not near genes chrX 16226982 intergenic not near genes chrX 16231207 intergenic not near genes chrX_21_16225001 chrX_16225001 RAL-307_125b 3995 chrX 16245906 16245960 chrX 16246063 16246117 INE-1 30 156 16.0 8.5 12.2 2.3 211 chrX 16245906 intergenic not near genes chrX 16246012 intergenic not near genes chrX 16246117 intergenic not near genes chrX_30_16245001 chrX_16245001 RAL-307_125b 3996 chrX 16253822 16253858 chrX 16253959 16253995 12 137 0.0 7.5 3.8 2.5 173 chrX 16253822 intergenic snRNA:U5:14B - chrX 16253908 intergenic snRNA:U5:14B - chrX 16253995 intergenic snRNA:U5:14B - chrX_12_16250001 chrX_16250001 RAL-307_125b 3997 chrX 16295492 16295555 chrX 16295626 16295683 10 129 3.5 0.0 1.8 3.6 191 chrX 16295492 intron CG9911 - chrX 16295588 intron CG9911 - chrX 16295683 intron CG9911 - chrX_10_16295001 chrX_16295001 RAL-307_125b 3998 chrX 16329359 16329446 chrX 16329506 16329561 8 137 0.0 6.5 3.2 1.9 202 chrX 16329359 exon CG9919 - chrX 16329460 intron CG9919 - chrX 16329561 exon CG9919 - chrX_8_16325001 chrX_16325001 RAL-307_125b 3999 chrX 16340617 16340691 chrX 16349822 16349898 roo 22 9205 9.0 5.5 7.2 2.7 9281 chrX 16340617 3` UTR Dsp1 + chrX 16345258 intergenic not near genes chrX 16349898 intergenic sl + chrX_22_16345001 chrX_16345001 RAL-307_125b 4000 chrX 16437570 16437579 chrX 16437706 16437716 5 137 15.0 15.0 15.0 0.3 146 chrX 16437570 3` UTR,3` UTR hang +,CG9947 - chrX 16437643 3` UTR,3` UTR hang +,CG9947 - chrX 16437716 3` UTR,3` UTR hang +,CG9947 - chrX_5_16435001 chrX_16435001 RAL-307_125b 4001 chrX 16437583 16437635 chrX 16437696 16437773 13 134 8.0 13.5 10.8 1.1 190 chrX 16437583 3` UTR,3` UTR hang +,CG9947 - chrX 16437678 3` UTR,3` UTR hang +,CG9947 - chrX 16437773 3` UTR,3` UTR hang +,CG9947 - chrX_13_16435001 chrX_16435001 RAL-307_125b 4002 chrX 16492601 16492666 chrX 16498222 16498292 mdg3 28 5627 13.0 6.0 9.5 2.7 5691 chrX 16492601 intron para - chrX 16495446 intron para - chrX 16498292 exon para - chrX_28_16495001 chrX_16495001 RAL-307_125b 4003 chrX 16645682 16645696 chrX 16645808 16645822 7 126 12.0 4.0 8.0 0.8 140 chrX 16645682 intron mthl1 + chrX 16645752 intron mthl1 + chrX 16645822 intron mthl1 + chrX_7_16645001 chrX_16645001 RAL-307_125b 4004 chrX 16689579 16689600 chrX 16689715 16689722 5 131 14.0 6.0 10.0 0.5 143 chrX 16689579 intron Sep4 - chrX 16689650 intron Sep4 - chrX 16689722 intron Sep4 - chrX_5_16685001 chrX_16685001 RAL-307_125b 4005 chrX 16689602 16689653 chrX 16689714 16689789 22 127 5.5 6.0 5.8 3.2 187 chrX 16689602 intron Sep4 - chrX 16689696 intron Sep4 - chrX 16689789 intron Sep4 - chrX_22_16685001 chrX_16685001 RAL-307_125b 4006 chrX 16700475 16700556 chrX 16700608 16700688 11 130 0.0 10.5 5.2 1.8 213 chrX 16700475 intron,3` UTR CG4678 +,spheroide - chrX 16700582 intron,3` UTR CG4678 +,spheroide - chrX 16700688 intron,3` UTR CG4678 +,spheroide - chrX_11_16700001 chrX_16700001 RAL-307_125b 4007 chrX 16766666 16766716 chrX 16766792 16766815 12 122 14.5 8.5 11.5 1.0 149 chrX 16766666 intron if - chrX 16766740 intron if - chrX 16766815 intron if - chrX_12_16765001 chrX_16765001 RAL-307_125b 4008 chrX 16821187 16821259 chrX 16821317 16821389 10 130 8.0 1.0 4.5 1.8 202 chrX 16821187 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821389 intron CG4829 + chrX_10_16820001 chrX_16820001 RAL-307_125b 4009 chrX 16870029 16870067 chrX 16870161 16870199 14 131 9.0 8.0 8.5 1.5 170 chrX 16870029 intron CG13003 - chrX 16870114 intron CG13003 - chrX 16870199 intron CG13003 - chrX_14_16870001 chrX_16870001 RAL-307_125b 4010 chrX 16880099 16880161 chrX 16880245 16880252 18 140 8.5 11.0 9.8 1.7 153 chrX 16880099 intergenic not near genes chrX 16880176 intergenic not near genes chrX 16880252 intergenic not near genes chrX_18_16880001 chrX_16880001 RAL-307_125b 4011 chrX 16898049 16898118 chrX 16898179 16898247 14 126 7.5 9.0 8.2 1.5 198 chrX 16898049 intergenic not near genes chrX 16898148 intergenic not near genes chrX 16898247 intergenic not near genes chrX_14_16895001 chrX_16895001 RAL-307_125b 4012 chrX 16906599 16906669 chrX 16906735 16906806 20 135 0.0 6.5 3.2 4.8 207 chrX 16906599 intron CR44754 - chrX 16906702 intron CR44754 - chrX 16906806 intron CR44754 - chrX_20_16905001 chrX_16905001 RAL-307_125b 4013 chrX 16935960 16936023 chrX 16936428 16936491 jockey 15 464 7.0 2.5 4.8 2.6 531 chrX 16935960 intron CG4928 + chrX 16936226 intron CG4928 + chrX 16936491 intron CG4928 + chrX_15_16935001 chrX_16935001 RAL-307_125b 4014 chrX 17011968 17011995 chrX 17012056 17012128 12 120 3.0 7.5 5.2 1.9 160 chrX 17011968 intron CG45002 - chrX 17012048 intron CG45002 - chrX 17012128 intron CG45002 - chrX_12_17010001 chrX_17010001 RAL-307_125b 4015 chrX 17057892 17057929 chrX 17058183 17058220 pogo 6 291 10.0 12.0 11.0 0.5 328 chrX 17057892 intron CG45002 - chrX 17058056 intron CG45002 - chrX 17058220 intron CG45002 - chrX_6_17055001 chrX_17055001 RAL-307_125b 4016 chrX 17057936 17057956 chrX 17058178 17058247 pogo 5 281 6.0 11.5 8.8 0.5 311 chrX 17057936 intron CG45002 - chrX 17058092 intron CG45002 - chrX 17058247 intron CG45002 - chrX_5_17055001 chrX_17055001 RAL-307_125b 4017 chrX 17088133 17088200 chrX 17088776 17088843 11 638 5.5 6.0 5.8 1.6 710 chrX 17088133 intergenic CG8945 - chrX 17088488 intergenic not near genes chrX 17088843 intergenic not near genes chrX_11_17085001 chrX_17085001 RAL-307_125b 4018 chrX 17100127 17100198 chrX 17100289 17100360 21 161 9.0 9.0 9.0 2.1 233 chrX 17100127 intron CG4991 + chrX 17100244 intron CG4991 + chrX 17100360 intron CG4991 + chrX_21_17100001 chrX_17100001 RAL-307_125b 4019 chrX 17195160 17195223 chrX 17200296 17200359 flea 27 5134 13.5 14.5 14.0 1.8 5199 chrX 17195160 3` UTR baz + chrX 17197760 3` UTR baz + chrX 17200359 3` UTR baz + chrX_27_17195001 chrX_17195001 RAL-307_125b 4020 chrX 17205798 17205856 chrX 17205938 17205995 36 138 7.5 6.5 7.0 4.5 197 chrX 17205798 intergenic not near genes chrX 17205896 intergenic not near genes chrX 17205995 intergenic CG32564 + chrX_36_17205001 chrX_17205001 RAL-307_125b 4021 chrX 17229905 17229965 chrX 17230058 17230118 30 151 9.5 5.0 7.2 3.7 213 chrX 17229905 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230118 intergenic CG10597 - chrX_30_17230001 chrX_17230001 RAL-307_125b 4022 chrX 17234223 17234288 chrX 17234367 17234434 7 140 4.5 1.0 2.8 1.8 211 chrX 17234223 intron f + chrX 17234328 intron f + chrX 17234434 intron f + chrX_7_17230001 chrX_17230001 RAL-307_125b 4023 chrX 17237481 17237536 chrX 17237615 17237670 14 133 6.5 11.5 9.0 1.4 189 chrX 17237481 intron f + chrX 17237576 intron f + chrX 17237670 intron f + chrX_14_17235001 chrX_17235001 RAL-307_125b 4024 chrX 17275497 17275510 chrX 17275626 17275639 5 127 11.5 12.0 11.8 0.4 142 chrX 17275497 intron f + chrX 17275568 intron f + chrX 17275639 intron f + chrX_5_17275001 chrX_17275001 RAL-307_125b 4025 chrX 17275511 17275556 chrX 17275611 17275683 14 116 5.5 8.0 6.8 1.8 172 chrX 17275511 intron f + chrX 17275597 intron f + chrX 17275683 intron f + chrX_14_17275001 chrX_17275001 RAL-307_125b 4026 chrX 17325678 17325741 chrX 17325828 17325904 19 155 0.0 9.0 4.5 3.5 226 chrX 17325678 intergenic not near genes chrX 17325791 intergenic not near genes chrX 17325904 intergenic not near genes chrX_19_17325001 chrX_17325001 RAL-307_125b 4027 chrX 17431320 17431338 chrX 17431696 17431704 jockey 5 383 7.5 5.0 6.2 0.7 384 chrX 17431320 intron CG12994 - chrX 17431512 intron CG12994 - chrX 17431704 intron CG12994 - chrX_5_17430001 chrX_17430001 RAL-307_125b 4028 chrX 17443074 17443105 chrX 17443248 17443279 7 174 9.5 7.0 8.2 0.8 205 chrX 17443074 intron CG12994 - chrX 17443176 intron CG12994 - chrX 17443279 intron CG12994 - chrX_7_17440001 chrX_17440001 RAL-307_125b 4029 chrX 17502041 17502340 chrX 17502282 17502470 31 176 1.5 1.5 1.5 12.4 429 chrX 17502041 intron CG43658 - chrX 17502256 intron CG43658 - chrX 17502470 intron CG43658 - chrX_31_17500001 chrX_17500001 RAL-307_125b 4030 chrX 17502350 17502369 chrX 17502464 17502499 6 127 1.5 16.0 8.8 0.6 149 chrX 17502350 intron CG43658 - chrX 17502424 intron CG43658 - chrX 17502499 intron CG43658 - chrX_6_17500001 chrX_17500001 RAL-307_125b 4031 chrX 17544970 17545027 chrX 17545102 17545159 7 131 10.5 9.0 9.8 0.6 189 chrX 17544970 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545159 intron CG43658 - chrX_7_17545001 chrX_17545001 RAL-307_125b 4032 chrX 17546919 17546997 chrX 17547102 17547180 18 182 0.5 4.0 2.2 5.6 261 chrX 17546919 intron CG43658 - chrX 17547050 intron CG43658 - chrX 17547180 intron CG43658 - chrX_18_17545001 chrX_17545001 RAL-307_125b 4033 chrX 17685411 17685472 chrX 17685544 17685605 19 132 0.0 6.5 3.2 4.5 194 chrX 17685411 intron chas - chrX 17685508 intron chas - chrX 17685605 intron chas - chrX_19_17685001 chrX_17685001 RAL-307_125b 4034 chrX 17716544 17716600 chrX 17716681 17716717 14 134 6.5 6.5 6.5 1.9 173 chrX 17716544 intron CG42684 + chrX 17716630 intron CG42684 + chrX 17716717 intron CG42684 + chrX_14_17715001 chrX_17715001 RAL-307_125b 4035 chrX 17726431 17726462 chrX 17726541 17726572 8 119 4.5 9.0 6.8 1.0 141 chrX 17726431 intron CG42684 + chrX 17726502 intron CG42684 + chrX 17726572 intron CG42684 + chrX_8_17725001 chrX_17725001 RAL-307_125b 4036 chrX 17731083 17731093 chrX 17731199 17731219 5 124 11.5 12.0 11.8 0.4 136 chrX 17731083 intron CG42684 + chrX 17731151 intron CG42684 + chrX 17731219 intron CG42684 + chrX_5_17730001 chrX_17730001 RAL-307_125b 4037 chrX 17731094 17731132 chrX 17731195 17731258 18 122 7.5 11.0 9.2 1.8 164 chrX 17731094 intron CG42684 + chrX 17731176 intron CG42684 + chrX 17731258 intron CG42684 + chrX_18_17730001 chrX_17730001 RAL-307_125b 4038 chrX 17740349 17740387 chrX 17740453 17740504 11 101 5.0 5.5 5.2 1.8 155 chrX 17740349 intron CG42684 + chrX 17740426 intron CG42684 + chrX 17740504 intron CG42684 + chrX_11_17740001 chrX_17740001 RAL-307_125b 4039 chrX 17784433 17784486 chrX 17784559 17784612 15 125 1.5 7.0 4.2 2.9 179 chrX 17784433 intergenic not near genes chrX 17784522 intergenic not near genes chrX 17784612 intergenic not near genes chrX_15_17780001 chrX_17780001 RAL-307_125b 4040 chrX 17792919 17792967 chrX 17796255 17796256 flea 10 3340 6.5 3.0 4.8 1.7 3337 chrX 17792919 intron OdsH + chrX 17794588 intron OdsH + chrX 17796256 intron OdsH + chrX_10_17790001 chrX_17790001 RAL-307_125b 4041 chrX 17867000 17867061 chrX 17867126 17867175 6 122 10.5 9.0 9.8 0.6 175 chrX 17867000 intron mnb - chrX 17867088 intron mnb - chrX 17867175 intron mnb - chrX_6_17865001 chrX_17865001 RAL-307_125b 4042 chrX 17939674 17939715 chrX 17939843 17939884 16 169 10.5 11.0 10.8 1.4 210 chrX 17939674 intergenic Sh - chrX 17939779 3` UTR Sh - chrX 17939884 3` UTR Sh - chrX_16_17935001 chrX_17935001 RAL-307_125b 4043 chrX 17960354 17960374 chrX 17960484 17960504 12 129 6.0 11.5 8.8 1.2 150 chrX 17960354 intron Sh - chrX 17960429 intron Sh - chrX 17960504 intron Sh - chrX_12_17960001 chrX_17960001 RAL-307_125b 4044 chrX 18132006 18132080 chrX 18132138 18132178 43 129 7.0 10.0 8.5 4.5 172 chrX 18132006 3` UTR ari-1 - chrX 18132092 3` UTR ari-1 - chrX 18132178 3` UTR ari-1 - chrX_43_18130001 chrX_18130001 RAL-307_125b 4045 chrX 18148586 18148625 chrX 18148739 18148763 11 151 4.5 3.0 3.8 2.3 177 chrX 18148586 intergenic not near genes chrX 18148674 intergenic not near genes chrX 18148763 intergenic not near genes chrX_11_18145001 chrX_18145001 RAL-307_125b 4046 chrX 18177009 18177024 chrX 18177152 18177167 4 143 6.5 4.5 5.5 0.6 158 chrX 18177009 intergenic not near genes chrX 18177088 intergenic not near genes chrX 18177167 intergenic Frq2 + chrX_4_18175001 chrX_18175001 RAL-307_125b 4047 chrX 18427333 18427361 chrX 18427794 18427822 18 460 20.5 6.0 13.2 1.3 489 chrX 18427333 intergenic CG42323 + chrX 18427578 intergenic not near genes chrX 18427822 intergenic not near genes chrX_18_18425001 chrX_18425001 RAL-307_125b 4048 chrX 18427364 18427407 chrX 18427793 18427868 12 458 9.5 5.0 7.2 1.5 504 chrX 18427364 intergenic CG42323 + chrX 18427616 intergenic not near genes chrX 18427868 intergenic not near genes chrX_12_18425001 chrX_18425001 RAL-307_125b 4049 chrX 18429448 18429510 chrX 18434809 18434870 Transpac 39 5359 8.5 6.5 7.5 4.6 5422 chrX 18429448 intergenic not near genes chrX 18432159 intergenic not near genes chrX 18434870 intergenic not near genes chrX_39_18430001 chrX_18430001 RAL-307_125b 4050 chrX 18479852 18479860 chrX 18479978 18479996 4 134 3.5 5.5 4.5 0.7 144 chrX 18479852 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479924 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479996 3` UTR Hayan - chrX_4_18475001 chrX_18475001 RAL-307_125b 4051 chrX 18486088 18486142 chrX 18486207 18486248 20 129 4.0 9.5 6.8 2.6 160 chrX 18486088 exon psh - chrX 18486168 intron psh - chrX 18486248 intron psh - chrX_20_18485001 chrX_18485001 RAL-307_125b 4052 chrX 18490016 18490052 chrX 18490199 18490226 10 194 3.0 2.5 2.8 2.6 210 chrX 18490016 intergenic CG15046 - chrX 18490121 intergenic not near genes chrX 18490226 intergenic not near genes chrX_10_18490001 chrX_18490001 RAL-307_125b 4053 chrX 18529347 18529399 chrX 18529473 18529525 29 126 5.0 9.5 7.2 3.5 178 chrX 18529347 intron,3` UTR Bx +,CG15047 + chrX 18529436 intron,3` UTR Bx +,CG15047 + chrX 18529525 intron,3` UTR Bx +,CG15047 + chrX_29_18525001 chrX_18525001 RAL-307_125b 4054 chrX 18543066 18543117 chrX 18543191 18543249 18 131 7.0 6.0 6.5 2.4 183 chrX 18543066 intron Bx + chrX 18543158 intron Bx + chrX 18543249 intron Bx + chrX_18_18540001 chrX_18540001 RAL-307_125b 4055 chrX 18555336 18555410 chrX 18556902 18556946 transib2 13 1564 3.0 4.5 3.8 2.7 1610 chrX 18555336 intron Bx + chrX 18556141 intron Bx + chrX 18556946 intron Bx + chrX_13_18555001 chrX_18555001 RAL-307_125b 4056 chrX 18576076 18576099 chrX 18576204 18576227 8 128 2.5 3.0 2.8 2.1 151 chrX 18576076 intergenic not near genes chrX 18576152 intergenic not near genes chrX 18576227 intergenic not near genes chrX_8_18575001 chrX_18575001 RAL-307_125b 4057 chrX 18644972 18645039 chrX 18645120 18645187 42 143 6.0 10.0 8.0 4.7 215 chrX 18644972 intron Rip11 - chrX 18645080 intron Rip11 - chrX 18645187 intron Rip11 - chrX_42_18645001 chrX_18645001 RAL-307_125b 4058 chrX 18671176 18671245 chrX 18671308 18671377 13 132 6.0 3.5 4.8 2.2 201 chrX 18671176 intergenic not near genes chrX 18671276 intergenic not near genes chrX 18671377 intergenic not near genes chrX_13_18670001 chrX_18670001 RAL-307_125b 4059 chrX 18698801 18698878 chrX 18698968 18699045 30 164 6.5 6.5 6.5 4.0 244 chrX 18698801 intergenic not near genes chrX 18698923 intergenic not near genes chrX 18699045 intergenic not near genes chrX_30_18695001 chrX_18695001 RAL-307_125b 4060 chrX 18746460 18746466 chrX 18746594 18746595 4 133 16.5 1.5 9.0 0.4 135 chrX 18746460 3` UTR CG12609 - chrX 18746528 3` UTR CG12609 - chrX 18746595 3` UTR CG12609 - chrX_4_18745001 chrX_18745001 RAL-307_125b 4061 chrX 18746486 18746517 chrX 18746591 18746654 8 131 6.0 1.5 3.8 1.7 168 chrX 18746486 3` UTR CG12609 - chrX 18746570 3` UTR CG12609 - chrX 18746654 3` UTR CG12609 - chrX_8_18745001 chrX_18745001 RAL-307_125b 4062 chrX 18754292 18754345 chrX 18758009 18758062 297 16 3714 6.5 10.0 8.2 1.7 3770 chrX 18754292 intergenic not near genes chrX 18756177 intergenic not near genes chrX 18758062 intergenic not near genes chrX_16_18755001 chrX_18755001 RAL-307_125b 4063 chrX 18819591 18819646 chrX 18819732 18819806 11 156 61.5 54.0 57.8 0.2 215 chrX 18819591 intron CG42450 + chrX 18819698 intron CG42450 + chrX 18819806 5` UTR CG42450 + chrX_11_18815001 chrX_18815001 RAL-307_125b 4064 chrX 18836602 18836623 chrX 18836745 18836766 9 143 29.0 9.0 19.0 0.5 164 chrX 18836602 intron Pvf1 + chrX 18836684 intron Pvf1 + chrX 18836766 intron Pvf1 + chrX_9_18835001 chrX_18835001 RAL-307_125b 4065 chrX 18836626 18836678 chrX 18836744 18836821 20 138 13.0 9.0 11.0 1.7 195 chrX 18836626 intron Pvf1 + chrX 18836724 intron Pvf1 + chrX 18836821 intron Pvf1 + chrX_20_18835001 chrX_18835001 RAL-307_125b 4066 chrX 18926493 18926508 chrX 18926635 18926635 6 140 7.5 0.0 3.8 1.2 142 chrX 18926493 intergenic not near genes chrX 18926564 intergenic not near genes chrX 18926635 intergenic not near genes chrX_6_18925001 chrX_18925001 RAL-307_125b 4067 chrX 18927588 18927610 chrX 18927714 18927736 5 126 19.5 10.0 14.8 0.3 148 chrX 18927588 intergenic not near genes chrX 18927662 intergenic not near genes chrX 18927736 intergenic not near genes chrX_5_18925001 chrX_18925001 RAL-307_125b 4068 chrX 18957031 18957086 chrX 18965744 18965799 roo 15 8713 8.0 5.0 6.5 2.0 8768 chrX 18957031 intron CG43759 + chrX 18961415 intron CG43759 + chrX 18965799 intron CG43759 + chrX_15_18960001 chrX_18960001 RAL-307_125b 4069 chrX 18957089 18957095 chrX 18965742 18965785 roo 4 8688 6.5 5.0 5.8 0.6 8696 chrX 18957089 intron CG43759 + chrX 18961437 intron CG43759 + chrX 18965785 intron CG43759 + chrX_4_18960001 chrX_18960001 RAL-307_125b 4070 chrX 19020539 19020598 chrX 19020670 19020726 16 130 5.0 13.0 9.0 1.6 187 chrX 19020539 intron CG43759 + chrX 19020632 intron CG43759 + chrX 19020726 intron CG43759 + chrX_16_19020001 chrX_19020001 RAL-307_125b 4071 chrX 19037941 19037947 chrX 19038120 19038126 5 179 8.0 5.5 6.8 0.6 185 chrX 19037941 intergenic not near genes chrX 19038034 intergenic not near genes chrX 19038126 intergenic not near genes chrX_5_19035001 chrX_19035001 RAL-307_125b 4072 chrX 19037950 19038001 chrX 19038099 19038180 6 168 4.5 3.5 4.0 1.2 230 chrX 19037950 intergenic not near genes chrX 19038065 intergenic not near genes chrX 19038180 intergenic not near genes chrX_6_19035001 chrX_19035001 RAL-307_125b 4073 chrX 19039004 19039043 chrX 19039159 19039190 12 151 12.0 11.5 11.8 0.9 186 chrX 19039004 intergenic not near genes chrX 19039097 intergenic not near genes chrX 19039190 intergenic not near genes chrX_12_19035001 chrX_19035001 RAL-307_125b 4074 chrX 19047107 19047132 chrX 19047233 19047253 5 125 4.0 9.5 6.8 0.6 146 chrX 19047107 intergenic not near genes chrX 19047180 intergenic not near genes chrX 19047253 intergenic not near genes chrX_5_19045001 chrX_19045001 RAL-307_125b 4075 chrX 19060367 19060420 chrX 19065201 19065254 Doc 15 4833 9.5 10.5 10.0 1.4 4887 chrX 19060367 intron CG14190 + chrX 19062810 intron CG14190 + chrX 19065254 intron CG14190 + chrX_15_19060001 chrX_19060001 RAL-307_125b 4076 chrX 19073634 19073696 chrX 19073771 19073833 31 134 8.5 6.5 7.5 3.6 199 chrX 19073634 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073833 intergenic not near genes chrX_31_19070001 chrX_19070001 RAL-307_125b 4077 chrX 19084042 19084107 chrX 19084212 19084277 24 169 10.0 10.0 10.0 2.2 235 chrX 19084042 intergenic CR45503 + chrX 19084160 intergenic CR45503 + chrX 19084277 intergenic CR45503 + chrX_24_19080001 chrX_19080001 RAL-307_125b 4078 chrX 19093918 19093950 chrX 19094044 19094056 7 122 9.5 5.0 7.2 0.9 138 chrX 19093918 intergenic not near genes chrX 19093987 intergenic not near genes chrX 19094056 intergenic not near genes chrX_7_19090001 chrX_19090001 RAL-307_125b 4079 chrX 19098724 19098766 chrX 19098852 19098894 15 128 1.5 8.5 5.0 2.5 170 chrX 19098724 intergenic not near genes chrX 19098809 intergenic not near genes chrX 19098894 intergenic not near genes chrX_15_19095001 chrX_19095001 RAL-307_125b 4080 chrX 19109091 19109136 chrX 19109303 19109339 11 219 0.0 3.5 1.8 3.9 248 chrX 19109091 intergenic not near genes chrX 19109215 intergenic not near genes chrX 19109339 intergenic not near genes chrX_11_19105001 chrX_19105001 RAL-307_125b 4081 chrX 19120377 19120394 chrX 19120495 19120536 9 139 11.5 6.5 9.0 0.9 159 chrX 19120377 intergenic not near genes chrX 19120456 intergenic not near genes chrX 19120536 intergenic not near genes chrX_9_19120001 chrX_19120001 RAL-307_125b 4082 chrX 19124387 19124464 chrX 19124524 19124603 20 137 5.5 12.5 9.0 2.0 216 chrX 19124387 5` UTR CG15882 - chrX 19124495 intergenic CG15882 - chrX 19124603 intergenic CG15882 -,tgy - chrX_20_19120001 chrX_19120001 RAL-307_125b 4083 chrX 19125642 19125718 chrX 19125821 19125882 32 176 7.5 10.0 8.8 3.3 240 chrX 19125642 exon tgy - chrX 19125762 intron tgy - chrX 19125882 intron tgy - chrX_32_19125001 chrX_19125001 RAL-307_125b 4084 chrX 19136512 19136581 chrX 19143482 19143499 412 23 6966 10.5 4.0 7.2 2.8 6987 chrX 19136512 intergenic not near genes chrX 19140006 intergenic not near genes chrX 19143499 3` UTR RhoGAP18B - chrX_23_19140001 chrX_19140001 RAL-307_125b 4085 chrX 19181978 19182046 chrX 19182141 19182182 15 161 1.5 8.5 5.0 2.5 204 chrX 19181978 3` UTR CG7453 + chrX 19182080 intergenic CG7453 + chrX 19182182 intergenic CG7453 + chrX_15_19180001 chrX_19180001 RAL-307_125b 4086 chrX 19309608 19309676 chrX 19309733 19309781 12 122 7.0 8.5 7.8 1.4 173 chrX 19309608 intergenic not near genes chrX 19309694 intergenic not near genes chrX 19309781 intergenic not near genes chrX_12_19305001 chrX_19305001 RAL-307_125b 4087 chrX 19324638 19324706 chrX 19325136 19325204 41 497 3.0 11.0 7.0 5.1 566 chrX 19324638 intergenic not near genes chrX 19324921 intergenic not near genes chrX 19325204 intergenic not near genes chrX_41_19320001 chrX_19320001 RAL-307_125b 4088 chrX 19356950 19356965 chrX 19358441 19358456 NOF 11 1491 18.5 0.0 9.2 1.1 1506 chrX 19356950 intron kek5 + chrX 19357703 intron kek5 + chrX 19358456 intron kek5 + chrX_11_19355001 chrX_19355001 RAL-307_125b 4089 chrX 19356967 19357017 chrX 19358432 19358526 NOF 21 1505 7.0 0.0 3.5 4.7 1559 chrX 19356967 intron kek5 + chrX 19357746 intron kek5 + chrX 19358526 intron kek5 + chrX_21_19355001 chrX_19355001 RAL-307_125b 4090 chrX 19380112 19380179 chrX 19380403 19380470 pogo 29 291 13.5 8.5 11.0 2.4 358 chrX 19380112 intron kek5 + chrX 19380291 intron kek5 + chrX 19380470 intron kek5 + chrX_29_19380001 chrX_19380001 RAL-307_125b 4091 chrX 19426730 19426775 chrX 19426874 19426910 7 129 8.0 5.0 6.5 0.9 180 chrX 19426730 intron kek5 + chrX 19426820 intron kek5 + chrX 19426910 intron kek5 + chrX_7_19425001 chrX_19425001 RAL-307_125b 4092 chrX 19430503 19430566 chrX 19430642 19430679 31 146 2.5 8.5 5.5 4.8 176 chrX 19430503 intron kek5 + chrX 19430591 intron kek5 + chrX 19430679 intron kek5 + chrX_31_19430001 chrX_19430001 RAL-307_125b 4093 chrX 19472084 19472154 chrX 19472704 19472743 jockey 21 616 11.0 11.0 11.0 1.8 659 chrX 19472084 intergenic kek5 + chrX 19472414 intergenic kek5 + chrX 19472743 intergenic not near genes chrX_21_19470001 chrX_19470001 RAL-307_125b 4094 chrX 19509076 19509137 chrX 19509429 19509490 29 352 12.5 11.5 12.0 2.2 414 chrX 19509076 intron,3` UTR CG14200 +,Pfrx + chrX 19509283 intron,3` UTR CG14200 +,Pfrx + chrX 19509490 intron CG14200 + chrX_29_19505001 chrX_19505001 RAL-307_125b 4095 chrX 19541375 19541446 chrX 19541504 19541576 39 126 7.0 9.0 8.0 4.3 201 chrX 19541375 intron CG32532 - chrX 19541476 intron CG32532 - chrX 19541576 intron CG32532 - chrX_39_19540001 chrX_19540001 RAL-307_125b 4096 chrX 19552625 19552649 chrX 19552771 19552796 4 152 4.0 7.0 5.5 0.6 171 chrX 19552625 intergenic not near genes chrX 19552710 intergenic not near genes chrX 19552796 intergenic not near genes chrX_4_19550001 chrX_19550001 RAL-307_125b 4097 chrX 19553451 19553488 chrX 19553577 19553614 10 126 7.0 13.0 10.0 0.9 163 chrX 19553451 intergenic not near genes chrX 19553532 intergenic not near genes chrX 19553614 intergenic not near genes chrX_10_19550001 chrX_19550001 RAL-307_125b 4098 chrX 19576509 19576582 chrX 19576637 19576681 18 123 4.5 4.5 4.5 3.3 172 chrX 19576509 intron Tao - chrX 19576595 intron Tao - chrX 19576681 intron Tao - chrX_18_19575001 chrX_19575001 RAL-307_125b 4099 chrX 19593901 19593978 chrX 19594036 19594113 30 131 8.5 4.5 6.5 4.0 212 chrX 19593901 exon CG14205 + chrX 19594007 intron CG14205 + chrX 19594113 exon CG14205 + chrX_30_19590001 chrX_19590001 RAL-307_125b 4100 chrX 19595683 19595742 chrX 19595822 19595881 21 137 5.5 1.0 3.2 5.0 198 chrX 19595683 intergenic CG14205 + chrX 19595782 intergenic CG14205 + chrX 19595881 intergenic CG14205 + chrX_21_19595001 chrX_19595001 RAL-307_125b 4101 chrX 19661980 19662055 chrX 19662253 19662328 34 271 6.5 11.0 8.8 3.5 348 chrX 19661980 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662328 intron CG14223 - chrX_34_19660001 chrX_19660001 RAL-307_125b 4102 chrX 19710046 19710095 chrX 19711862 19711928 S-element 12 1832 5.0 7.5 6.2 1.7 1882 chrX 19710046 intron meso18E - chrX 19710987 intron meso18E - chrX 19711928 intron meso18E - chrX_12_19710001 chrX_19710001 RAL-307_125b 4103 chrX 19756080 19756094 chrX 19756216 19756230 6 134 23.5 5.5 14.5 0.4 150 chrX 19756080 intron Pmp70 + chrX 19756155 intron Pmp70 + chrX 19756230 intron Pmp70 + chrX_6_19755001 chrX_19755001 RAL-307_125b 4104 chrX 19756095 19756105 chrX 19756215 19756225 6 131 20.5 5.5 13.0 0.4 130 chrX 19756095 intron Pmp70 + chrX 19756160 intron Pmp70 + chrX 19756225 intron Pmp70 + chrX_6_19755001 chrX_19755001 RAL-307_125b 4105 chrX 19797300 19797340 chrX 19804663 19804703 Stalker4 11 7362 18.5 7.5 13.0 0.8 7403 chrX 19797300 intergenic not near genes chrX 19801002 intergenic not near genes chrX 19804703 intergenic not near genes chrX_11_19800001 chrX_19800001 RAL-307_125b 4106 chrX 19819394 19819447 chrX 19819527 19819580 21 132 8.0 5.5 6.8 2.7 186 chrX 19819394 intergenic not near genes chrX 19819487 intergenic not near genes chrX 19819580 intergenic not near genes chrX_21_19815001 chrX_19815001 RAL-307_125b 4107 chrX 19819983 19820041 chrX 19820118 19820176 15 132 7.5 11.0 9.2 1.5 193 chrX 19819983 intergenic not near genes chrX 19820080 intergenic not near genes chrX 19820176 intergenic not near genes chrX_15_19820001 chrX_19820001 RAL-307_125b 4108 chrX 19881410 19881425 chrX 19881541 19881556 6 131 19.0 9.5 14.2 0.4 146 chrX 19881410 intron Hers + chrX 19881483 intron Hers + chrX 19881556 intron Hers + chrX_6_19880001 chrX_19880001 RAL-307_125b 4109 chrX 19881428 19881481 chrX 19881539 19881585 27 129 8.0 9.5 8.8 2.8 157 chrX 19881428 intron Hers + chrX 19881506 intron Hers + chrX 19881585 intron Hers + chrX_27_19880001 chrX_19880001 RAL-307_125b 4110 chrX 19884080 19884122 chrX 19884162 19884177 5 88 4.5 6.5 5.5 0.8 97 chrX 19884080 intron Hers + chrX 19884128 intron Hers + chrX 19884177 intron Hers + chrX_5_19880001 chrX_19880001 RAL-307_125b 4111 chrX 19975781 19975808 chrX 19976063 19976090 11 280 9.0 8.0 8.5 1.2 309 chrX 19975781 intergenic not near genes chrX 19975936 intergenic not near genes chrX 19976090 intergenic not near genes chrX_11_19975001 chrX_19975001 RAL-307_125b 4112 chrX 19975809 19975828 chrX 19976060 19976110 7 278 6.5 8.0 7.2 0.9 301 chrX 19975809 intergenic not near genes chrX 19975960 intergenic not near genes chrX 19976110 intergenic not near genes chrX_7_19975001 chrX_19975001 RAL-307_125b 4113 chrX 19983381 19983519 chrX 19983516 19983711 9 148 0.0 0.0 0.0 9.0 330 chrX 19983381 intergenic not near genes chrX 19983546 intergenic not near genes chrX 19983711 intergenic not near genes chrX_9_19980001 chrX_19980001 RAL-307_125b 4114 chrX 19990309 19990364 chrX 19990464 19990519 15 153 4.5 6.5 5.5 2.3 210 chrX 19990309 intergenic not near genes chrX 19990414 intergenic not near genes chrX 19990519 intergenic not near genes chrX_15_19990001 chrX_19990001 RAL-307_125b 4115 chrX 19992380 19992388 chrX 19992497 19992499 4 117 11.0 8.0 9.5 0.4 119 chrX 19992380 intergenic not near genes chrX 19992440 intergenic not near genes chrX 19992499 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-307_125b 4116 chrX 20041485 20041560 chrX 20041615 20041690 28 128 3.0 7.5 5.2 4.5 205 chrX 20041485 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041690 intron Dop2R - chrX_28_20040001 chrX_20040001 RAL-307_125b 4117 chrX 20125348 20125392 chrX 20125480 20125524 24 132 6.5 17.5 12.0 1.8 176 chrX 20125348 intergenic CG34331 + chrX 20125436 intergenic CG34331 + chrX 20125524 intergenic CG34331 + chrX_24_20125001 chrX_20125001 RAL-307_125b 4118 chrX 20132261 20132279 chrX 20132389 20132412 9 131 12.5 6.5 9.5 0.9 151 chrX 20132261 intergenic not near genes chrX 20132336 intergenic not near genes chrX 20132412 intergenic not near genes chrX_9_20130001 chrX_20130001 RAL-307_125b 4119 chrX 20150374 20150394 chrX 20150479 20150533 10 121 1.0 7.0 4.0 2.0 159 chrX 20150374 intron CG9572 + chrX 20150454 intron CG9572 + chrX 20150533 intron CG9572 + chrX_10_20150001 chrX_20150001 RAL-307_125b 4120 chrX 20271457 20271526 chrX 20271598 20271663 15 142 8.0 0.0 4.0 3.0 206 chrX 20271457 intergenic not near genes chrX 20271560 intergenic not near genes chrX 20271663 intergenic not near genes chrX_15_20270001 chrX_20270001 RAL-307_125b 4121 chrX 20279708 20279774 chrX 20279839 20279905 15 130 0.5 7.0 3.8 3.1 197 chrX 20279708 intergenic not near genes chrX 20279806 intergenic not near genes chrX 20279905 intergenic not near genes chrX_15_20275001 chrX_20275001 RAL-307_125b 4122 chrX 20312836 20312911 chrX 20312961 20313039 37 127 12.5 10.5 11.5 3.0 203 chrX 20312836 intron CG1504 - chrX 20312938 intron CG1504 - chrX 20313039 intron CG1504 - chrX_37_20310001 chrX_20310001 RAL-307_125b 4123 chrX 20314222 20314251 chrX 20314354 20314383 4 130 15.0 19.0 17.0 0.2 161 chrX 20314222 intron CG1504 - chrX 20314302 intron CG1504 - chrX 20314383 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-307_125b 4124 chrX 20320261 20320303 chrX 20320388 20320430 11 125 13.0 6.5 9.8 1.0 169 chrX 20320261 intron CG1504 - chrX 20320346 intron CG1504 - chrX 20320430 intron CG1504 - chrX_11_20320001 chrX_20320001 RAL-307_125b 4125 chrX 20362131 20362163 chrX 20362521 20362552 11 389 4.5 6.5 5.5 1.7 421 chrX 20362131 intergenic not near genes chrX 20362342 intergenic not near genes chrX 20362552 intergenic not near genes chrX_11_20360001 chrX_20360001 RAL-307_125b 4126 chrX 20369270 20369341 chrX 20369404 20369475 24 134 5.5 5.5 5.5 3.7 205 chrX 20369270 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369475 intergenic not near genes chrX_24_20365001 chrX_20365001 RAL-307_125b 4127 chrX 20374042 20374126 chrX 20374168 20374252 27 124 2.0 7.5 4.8 4.7 210 chrX 20374042 intergenic not near genes chrX 20374147 intergenic not near genes chrX 20374252 intergenic not near genes chrX_27_20370001 chrX_20370001 RAL-307_125b 4128 chrX 20377273 20377346 chrX 20378790 20378823 hobo 8 1492 5.5 5.5 5.5 1.2 1550 chrX 20377273 intergenic not near genes chrX 20378048 intergenic not near genes chrX 20378823 intergenic not near genes chrX_8_20375001 chrX_20375001 RAL-307_125b 4129 chrX 20437323 20437392 chrX 20437940 20438000 30 619 6.0 8.0 7.0 3.8 677 chrX 20437323 intron CG1695 + chrX 20437662 intron CG1695 + chrX 20438000 intron CG1695 + chrX_30_20435001 chrX_20435001 RAL-307_125b 4130 chrX 20443164 20443200 chrX 20443290 20443326 14 126 6.0 10.0 8.0 1.6 162 chrX 20443164 exon CG1695 + chrX 20443245 intron CG1695 + chrX 20443326 intron CG1695 + chrX_14_20440001 chrX_20440001 RAL-307_125b 4131 chrX 20467969 20468036 chrX 20468108 20468168 10 130 9.5 0.5 5.0 1.7 199 chrX 20467969 intron GstT3 + chrX 20468068 intron GstT3 + chrX 20468168 intron GstT3 + chrX_10_20465001 chrX_20465001 RAL-307_125b 4132 chrX 20528560 20528621 chrX 20528958 20529009 33 398 10.5 13.5 12.0 2.5 449 chrX 20528560 intergenic not near genes chrX 20528784 intergenic not near genes chrX 20529009 intergenic not near genes chrX_33_20525001 chrX_20525001 RAL-307_125b 4133 chrX 20531712 20531782 chrX 20531862 20531931 27 149 0.5 8.0 4.2 5.2 219 chrX 20531712 intergenic not near genes chrX 20531822 intergenic not near genes chrX 20531931 intergenic not near genes chrX_27_20530001 chrX_20530001 RAL-307_125b 4134 chrX 20541324 20541327 chrX 20541474 20541500 4 163 1.5 0.0 0.8 2.2 176 chrX 20541324 intron RunxB + chrX 20541412 intron RunxB + chrX 20541500 intron RunxB + chrX_4_20540001 chrX_20540001 RAL-307_125b 4135 chrX 20546511 20546554 chrX 20546727 20546756 9 214 5.0 12.5 8.8 0.9 245 chrX 20546511 intron RunxB + chrX 20546634 intron RunxB + chrX 20546756 intron RunxB + chrX_9_20545001 chrX_20545001 RAL-307_125b 4136 chrX 20635386 20635443 chrX 20635602 20635659 23 213 2.0 9.5 5.8 3.4 273 chrX 20635386 intergenic not near genes chrX 20635522 intergenic not near genes chrX 20635659 intergenic not near genes chrX_23_20635001 chrX_20635001 RAL-307_125b 4137 chrX 20679993 20680040 chrX 20680120 20680140 10 122 4.0 7.5 5.8 1.5 147 chrX 20679993 intergenic not near genes chrX 20680066 intergenic not near genes chrX 20680140 intergenic not near genes chrX_10_20680001 chrX_20680001 RAL-307_125b 4138 chrX 20710412 20710425 chrX 20710539 20710552 11 127 5.0 1.0 3.0 2.8 140 chrX 20710412 intergenic not near genes chrX 20710482 intergenic not near genes chrX 20710552 intergenic not near genes chrX_11_20710001 chrX_20710001 RAL-307_125b 4139 chrX 20741122 20741132 chrX 20741254 20741261 4 131 0.0 6.5 3.2 1.0 139 chrX 20741122 intergenic not near genes chrX 20741192 intergenic not near genes chrX 20741261 intergenic not near genes chrX_4_20740001 chrX_20740001 RAL-307_125b 4140 chrX 20780176 20780239 chrX 20780451 20780502 22 270 7.5 7.0 7.2 2.7 326 chrX 20780176 intron,3` UTR shakB -,CG32507 - chrX 20780339 intron,3` UTR shakB -,CG32507 - chrX 20780502 intron,3` UTR shakB -,CG32507 - chrX_22_20780001 chrX_20780001 RAL-307_125b 4141 chrX 20810677 20810684 chrX 20810805 20810811 7 128 19.0 7.5 13.2 0.5 134 chrX 20810677 intron shakB - chrX 20810744 intron shakB - chrX 20810811 intron shakB - chrX_7_20810001 chrX_20810001 RAL-307_125b 4142 chrX 20810735 20810743 chrX 20810863 20810871 4 128 9.5 21.5 15.5 0.2 136 chrX 20810735 intron shakB - chrX 20810803 intron shakB - chrX 20810871 intron shakB - chrX_4_20810001 chrX_20810001 RAL-307_125b 4143 chrX 20836742 20836749 chrX 20844375 20844378 roo 7 7646 1.5 12.0 6.8 0.9 7636 chrX 20836742 intron shakB - chrX 20840560 intron shakB - chrX 20844378 intron shakB - chrX_7_20840001 chrX_20840001 RAL-307_125b 4144 chrX 20836750 20836757 chrX 20844347 20844388 roo 6 7638 1.0 7.0 4.0 1.2 7638 chrX 20836750 intron shakB - chrX 20840569 intron shakB - chrX 20844388 intron shakB - chrX_6_20840001 chrX_20840001 RAL-307_125b 4145 chrX 20890474 20890538 chrX 20890609 20890673 22 134 8.0 8.5 8.2 2.4 199 chrX 20890474 intron shakB - chrX 20890574 intron shakB - chrX 20890673 intron shakB - chrX_22_20890001 chrX_20890001 RAL-307_125b 4146 chrX 20897890 20897938 chrX 20898030 20898048 10 128 7.0 0.0 3.5 2.2 158 chrX 20897890 intron shakB - chrX 20897969 intron shakB - chrX 20898048 intron shakB - chrX_10_20895001 chrX_20895001 RAL-307_125b 4147 chrX 20915003 20915066 chrX 20915224 20915287 21 220 6.0 6.5 6.2 2.9 284 chrX 20915003 intron shakB - chrX 20915145 intron shakB - chrX 20915287 intron shakB - chrX_21_20915001 chrX_20915001 RAL-307_125b 4148 chrX 20940681 20940686 chrX 20942200 20942205 hobo 4 1519 12.5 3.5 8.0 0.4 1524 chrX 20940681 intergenic not near genes chrX 20941443 intergenic not near genes chrX 20942205 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-307_125b 4149 chrX 20940687 20940725 chrX 20942199 20942228 hobo 10 1516 11.0 3.0 7.0 1.2 1541 chrX 20940687 intergenic not near genes chrX 20941458 intergenic not near genes chrX 20942228 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-307_125b 4150 chrX 20948205 20948279 chrX 20948344 20948418 22 138 4.5 9.0 6.8 2.8 213 chrX 20948205 intergenic not near genes chrX 20948312 intergenic not near genes chrX 20948418 intergenic not near genes chrX_22_20945001 chrX_20945001 RAL-307_125b 4151 chrX 20955826 20955875 chrX 20956008 20956076 20 199 11.5 7.0 9.2 2.0 250 chrX 20955826 intergenic not near genes chrX 20955951 intergenic not near genes chrX 20956076 intergenic not near genes chrX_20_20955001 chrX_20955001 RAL-307_125b 4152 chrX 20956950 20956983 chrX 20962442 20962475 I-element 6 5492 0.0 9.0 4.5 1.1 5525 chrX 20956950 intergenic not near genes chrX 20959712 intergenic not near genes chrX 20962475 intergenic Ser6 - chrX_6_20955001 chrX_20955001 RAL-307_125b 4153 chrX 20956984 20957004 chrX 20962434 20962496 I-element 8 5482 0.0 7.5 3.8 1.7 5512 chrX 20956984 intergenic not near genes chrX 20959740 intergenic not near genes chrX 20962496 intergenic Ser6 - chrX_8_20955001 chrX_20955001 RAL-307_125b 4154 chrX 20976186 20976244 chrX 20977495 20977574 19 1320 7.5 5.5 6.5 2.5 1388 chrX 20976186 intergenic not near genes chrX 20976880 intergenic not near genes chrX 20977574 intergenic not near genes chrX_19_20975001 chrX_20975001 RAL-307_125b 4155 chrX 21029102 21029179 chrX 21029369 21029405 11 262 1.5 10.5 6.0 1.6 303 chrX 21029102 3` UTR CG1529 - chrX 21029254 3` UTR CG1529 - chrX 21029405 3` UTR CG1529 - chrX_11_21025001 chrX_21025001 RAL-307_125b 4156 chrX 21029757 21029812 chrX 21029948 21030003 10 191 1.5 13.5 7.5 1.2 246 chrX 21029757 3` UTR CG1529 - chrX 21029880 3` UTR CG1529 - chrX 21030003 3` UTR CG1529 - chrX_10_21025001 chrX_21025001 RAL-307_125b 4157 chrX 21061819 21061876 chrX 21062354 21062411 roo 20 532 10.0 6.5 8.2 2.2 592 chrX 21061819 intron bves + chrX 21062115 intron bves + chrX 21062411 intron,3` UTR bves +,CG32512 - chrX_20_21060001 chrX_21060001 RAL-307_125b 4158 chrX 21061879 21061886 chrX 21062349 21062421 roo 4 519 8.0 5.0 6.5 0.5 542 chrX 21061879 intron bves + chrX 21062150 intron bves + chrX 21062421 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 RAL-307_125b 4159 chrX 21084514 21084523 chrX 21085079 21085088 9 565 26.5 11.0 18.8 0.5 574 chrX 21084514 intergenic not near genes chrX 21084801 intergenic not near genes chrX 21085088 intergenic not near genes chrX_9_21080001 chrX_21080001 RAL-307_125b 4160 chrX 21084524 21084532 chrX 21085078 21085097 5 563 23.0 11.0 17.0 0.3 573 chrX 21084524 intergenic not near genes chrX 21084810 intergenic not near genes chrX 21085097 intergenic not near genes chrX_5_21080001 chrX_21080001 RAL-307_125b 4161 chrX 21084534 21084577 chrX 21085074 21085142 23 562 11.0 10.5 10.8 1.9 608 chrX 21084534 intergenic not near genes chrX 21084838 intergenic not near genes chrX 21085142 intergenic not near genes chrX_23_21080001 chrX_21080001 RAL-307_125b 4162 chrX 21086087 21086152 chrX 21087165 21087226 jockey 38 1075 11.0 10.5 10.8 3.2 1139 chrX 21086087 intergenic not near genes chrX 21086656 intergenic not near genes chrX 21087226 intergenic not near genes chrX_38_21085001 chrX_21085001 RAL-307_125b 4163 chrX 21260387 21260443 chrX 21260580 21260650 18 201 6.5 4.5 5.5 2.8 263 chrX 21260387 intron CG32521 - chrX 21260518 intron CG32521 - chrX 21260650 intron CG32521 - chrX_18_21260001 chrX_21260001 RAL-307_125b 4164 chrX 21263190 21263210 chrX 21263374 21263383 9 183 5.5 8.0 6.8 1.2 193 chrX 21263190 intron CG32521 - chrX 21263286 intron CG32521 - chrX 21263383 intron CG32521 - chrX_9_21260001 chrX_21260001 RAL-307_125b 4165 chrX 21264685 21264754 chrX 21264811 21264865 34 122 8.5 11.5 10.0 3.1 180 chrX 21264685 intron CG32521 - chrX 21264775 intron CG32521 - chrX 21264865 intron CG32521 - chrX_34_21260001 chrX_21260001 RAL-307_125b 4166 chrX 21308835 21308875 chrX 21308979 21309051 8 168 6.5 0.0 3.2 1.9 216 chrX 21308835 exon CG1801 - chrX 21308943 intron CG1801 - chrX 21309051 intron CG1801 - chrX_8_21305001 chrX_21305001 RAL-307_125b 4167 chrX 21328069 21328147 chrX 21328230 21328309 24 160 5.0 8.0 6.5 3.2 240 chrX 21328069 3` UTR CG1486 + chrX 21328189 intergenic CG1486 +,tty - chrX 21328309 intergenic CG1486 +,tty - chrX_24_21325001 chrX_21325001 RAL-307_125b 4168 chrX 21427388 21427400 chrX 21427586 21427598 6 198 15.0 6.5 10.8 0.5 210 chrX 21427388 intron CG42343 - chrX 21427493 intron CG42343 - chrX 21427598 intron CG42343 - chrX_6_21425001 chrX_21425001 RAL-307_125b 4169 chrX 21452741 21452767 chrX 21452872 21452898 10 131 5.0 13.0 9.0 1.0 157 chrX 21452741 intron CG42343 - chrX 21452820 intron CG42343 - chrX 21452898 intron CG42343 - chrX_10_21450001 chrX_21450001 RAL-307_125b 4170 chrX 21454815 21454871 chrX 21454949 21455005 14 133 6.5 9.5 8.0 1.6 190 chrX 21454815 intron CG42343 - chrX 21454910 intron CG42343 - chrX 21455005 intron CG42343 - chrX_14_21450001 chrX_21450001 RAL-307_125b 4171 chrX 21455191 21455245 chrX 21455398 21455482 21 235 5.5 1.5 3.5 4.7 291 chrX 21455191 intron CG42343 - chrX 21455336 intron CG42343 - chrX 21455482 intron CG42343 - chrX_21_21455001 chrX_21455001 RAL-307_125b 4172 chrX 21458650 21458726 chrX 21464136 21464212 Ivk 19 5486 9.5 5.5 7.5 2.2 5562 chrX 21458650 intergenic not near genes chrX 21461431 intergenic not near genes chrX 21464212 intergenic not near genes chrX_19_21460001 chrX_21460001 RAL-307_125b 4173 chrX 21474369 21474432 chrX 21474785 21474848 1731 24 414 7.0 7.0 7.0 3.0 479 chrX 21474369 intergenic not near genes chrX 21474608 intergenic not near genes chrX 21474848 intergenic not near genes chrX_24_21470001 chrX_21470001 RAL-307_125b 4174 chrX 21475593 21475606 chrX 21475735 21475760 4 150 1.0 5.0 3.0 1.0 167 chrX 21475593 intergenic not near genes chrX 21475676 intergenic not near genes chrX 21475760 intergenic not near genes chrX_4_21475001 chrX_21475001 RAL-307_125b 4175 chrX 21565416 21565430 chrX 21565493 21565558 9 121 10.5 6.5 8.5 0.9 142 chrX 21565416 intergenic not near genes chrX 21565487 intergenic not near genes chrX 21565558 intergenic not near genes chrX_9_21565001 chrX_21565001 RAL-307_125b 4176 chrX 21567928 21567956 chrX 21568040 21568040 4 103 10.5 1.0 5.8 0.6 112 chrX 21567928 intergenic not near genes chrX 21567984 intergenic not near genes chrX 21568040 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-307_125b 4177 chrX 21573846 21573915 chrX 21573983 21574052 26 135 8.5 8.0 8.2 2.8 206 chrX 21573846 intergenic not near genes chrX 21573949 intergenic not near genes chrX 21574052 intergenic not near genes chrX_26_21570001 chrX_21570001 RAL-307_125b 4178 chrX 21575492 21575559 chrX 21575621 21575687 34 128 9.5 7.5 8.5 3.6 195 chrX 21575492 intergenic not near genes chrX 21575590 intergenic not near genes chrX 21575687 intergenic not near genes chrX_34_21575001 chrX_21575001 RAL-307_125b 4179 chrX 21581080 21581154 chrX 21581210 21581284 20 127 1.0 8.5 4.8 3.4 204 chrX 21581080 intergenic not near genes chrX 21581182 intergenic not near genes chrX 21581284 intergenic not near genes chrX_20_21580001 chrX_21580001 RAL-307_125b 4180 chrX 21595542 21595571 chrX 21598646 21598675 micropia 12 3102 13.0 10.5 11.8 0.9 3133 chrX 21595542 intergenic not near genes chrX 21597108 intergenic not near genes chrX 21598675 intergenic not near genes chrX_12_21595001 chrX_21595001 RAL-307_125b 4181 chrX 21668212 21668285 chrX 21668347 21668420 25 131 10.5 3.0 6.8 3.2 208 chrX 21668212 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668420 intergenic not near genes chrX_25_21665001 chrX_21665001 RAL-307_125b 4182 chrX 22478829 22478880 chrX 22479012 22479063 22 182 9.0 11.0 10.0 2.0 234 chrX 22478829 intron CG12576 - chrX 22478946 intron CG12576 - chrX 22479063 intron CG12576 - chrX_22_22475001 chrX_22475001 RAL-307_125b 4183 chrX 22486918 22486948 chrX 22487046 22487076 7 128 1.5 8.0 4.8 1.2 158 chrX 22486918 intron Cp110 + chrX 22486997 intron Cp110 + chrX 22487076 3` UTR Cp110 + chrX_7_22485001 chrX_22485001 RAL-307_125b 4184 chrX 22491279 22491287 chrX 22491398 22491415 5 124 11.5 11.0 11.2 0.4 136 chrX 22491279 intron l(1)G0196 + chrX 22491347 intron l(1)G0196 + chrX 22491415 intron l(1)G0196 + chrX_5_22490001 chrX_22490001 RAL-307_125b 4185 chrX 22519274 22519324 chrX 22519449 22519509 21 184 3.0 8.5 5.8 3.1 235 chrX 22519274 intron CG17600 + chrX 22519392 intron CG17600 + chrX 22519509 intron CG17600 + chrX_21_22515001 chrX_22515001 RAL-307_125b 4186 chrX 22522589 22522655 chrX 22525457 22525475 NOF 15 2866 5.5 8.0 6.8 1.9 2886 chrX 22522589 intron CG17600 + chrX 22524032 intron CG17600 + chrX 22525475 intron CG17600 + chrX_15_22520001 chrX_22520001 RAL-307_125b 4187 chrX 22564570 22564574 chrX 22575092 22575143 jockey 9 10528 28.5 12.5 20.5 0.4 10573 chrX 22564570 intergenic not near genes chrX 22569856 intergenic not near genes chrX 22575143 intergenic not near genes chrX_9_22565001 chrX_22565001 RAL-307_125b 4188 chrX 22585463 22585521 chrX 22585596 22585655 12 134 13.5 1.5 7.5 1.4 192 chrX 22585463 intron Cda4 - chrX 22585559 intron Cda4 - chrX 22585655 intron Cda4 - chrX_12_22585001 chrX_22585001 RAL-307_125b 4189 chrX 22644860 22644864 chrX 22645463 22645467 4 603 3.5 19.0 11.2 0.3 607 chrX 22644860 intergenic not near genes chrX 22645164 intergenic not near genes chrX 22645467 intergenic not near genes chrX_4_22645001 chrX_22645001 RAL-307_125b 4190 chrX 22658108 22658181 chrX 22658328 22658401 32 219 3.5 8.0 5.8 4.7 293 chrX 22658108 intron CR44997 + chrX 22658254 intron CR44997 + chrX 22658401 intron CR44997 + chrX_32_22655001 chrX_22655001 RAL-307_125b 4191 chrX 22658463 22658537 chrX 22658617 22658691 24 153 10.0 5.0 7.5 2.8 228 chrX 22658463 intron CR44997 + chrX 22658577 intron CR44997 + chrX 22658691 intron CR44997 + chrX_24_22655001 chrX_22655001 RAL-307_125b 4192 chrX 22697454 22697521 chrX 22701801 22701867 Juan 25 4343 5.0 12.5 8.8 2.6 4413 chrX 22697454 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701867 intron CR44997 + chrX_25_22695001 chrX_22695001 RAL-307_125b 4193 chrX 22734411 22734443 chrX 22734540 22734572 12 129 7.0 4.5 5.8 1.8 161 chrX 22734411 intron CR44997 + chrX 22734492 intron CR44997 + chrX 22734572 intron CR44997 + chrX_12_22730001 chrX_22730001 RAL-307_125b 4194 chrX 22771459 22771524 chrX 22774800 22774840 297 8 3335 9.0 6.0 7.5 0.9 3381 chrX 22771459 intron CR44997 + chrX 22773150 intron CR44997 + chrX 22774840 intron CR44997 + chrX_8_22770001 chrX_22770001 RAL-307_125b 4195 chrX 22784047 22784105 chrX 22784164 22784238 29 132 8.5 6.5 7.5 3.4 191 chrX 22784047 intron CR44997 + chrX 22784142 intron CR44997 + chrX 22784238 intron CR44997 + chrX_29_22780001 chrX_22780001 RAL-307_125b 4196 chrX 22811955 22812005 chrX 22816777 22816827 F-element 19 4820 9.5 6.0 7.8 2.2 4872 chrX 22811955 intergenic CG12446 - chrX 22814391 intergenic not near genes chrX 22816827 intergenic not near genes chrX_19_22810001 chrX_22810001 RAL-307_125b 4197 chrX 22824221 22824431 chrX 22824397 22824614 36 180 0.5 0.5 0.5 24.0 393 chrX 22824221 intergenic fog - chrX 22824418 3` UTR fog - chrX 22824614 3` UTR fog - chrX_36_22820001 chrX_22820001 RAL-307_125b 4198 chrX 22838557 22838568 chrX 22838687 22838698 INE-1 6 129 13.0 10.0 11.5 0.5 141 chrX 22838557 intron,intron fog -,CG42346 + chrX 22838628 intron,intron fog -,CG42346 + chrX 22838698 intron,intron fog -,CG42346 + chrX_6_22835001 chrX_22835001 RAL-307_125b 4199 chrX 22867935 22867956 chrX 22868099 22868120 9 164 11.5 7.0 9.2 0.9 185 chrX 22867935 exon CG42346 + chrX 22868028 intron CG42346 + chrX 22868120 intron CG42346 + chrX_9_22865001 chrX_22865001 RAL-307_125b 4200 chrX 22867971 22867986 chrX 22868095 22868158 5 162 7.0 6.5 6.8 0.6 187 chrX 22867971 exon CG42346 + chrX 22868064 intron CG42346 + chrX 22868158 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-307_125b 4201 chrX 22867989 22868000 chrX 22868093 22868172 5 155 7.0 6.5 6.8 0.6 183 chrX 22867989 exon CG42346 + chrX 22868080 intron CG42346 + chrX 22868172 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-307_125b 4202 chrX 22870828 22870833 chrX 22870969 22870974 4 140 17.5 7.5 12.5 0.3 146 chrX 22870828 intron,3` UTR CG42346 +,CR43656 - chrX 22870901 intron,3` UTR CG42346 +,CR43656 - chrX 22870974 intron,3` UTR CG42346 +,CR43656 - chrX_4_22870001 chrX_22870001 RAL-307_125b 4203 chrX 22870837 22870894 chrX 22870963 22871033 14 135 7.5 7.0 7.2 1.7 196 chrX 22870837 intron,3` UTR CG42346 +,CR43656 - chrX 22870935 intron,3` UTR CG42346 +,CR43656 - chrX 22871033 intron,3` UTR CG42346 +,CR43656 - chrX_14_22870001 chrX_22870001 RAL-307_125b 4204 chrX 22893446 22893524 chrX 22893582 22893628 18 123 6.0 3.0 4.5 3.3 182 chrX 22893446 intergenic not near genes chrX 22893537 intergenic not near genes chrX 22893628 intergenic not near genes chrX_18_22890001 chrX_22890001 RAL-307_125b 4205 chrX 22967343 22967511 chrX 23154544 23154686 diver 11 187198 0.5 25.5 13.0 0.8 187343 chrX 22967343 intergenic not near genes chrX 23061014 intergenic not near genes chrX 23154686 intergenic not near genes chrX_11_23060001 chrX_23060001 RAL-307_125b 4206 chrX 22987057 22987126 chrX 22989766 22989813 Burdock 14 2703 4.5 6.0 5.2 2.3 2756 chrX 22987057 intron,intron stnA -,stnB - chrX 22988435 intron,intron stnA -,stnB - chrX 22989813 intron,intron stnA -,stnB - chrX_14_22985001 chrX_22985001 RAL-307_125b 4207 chrX 22992356 22992428 chrX 22992537 22992576 24 174 7.0 11.5 9.2 2.4 220 chrX 22992356 intron,intron stnA -,stnB - chrX 22992466 intron,intron stnA -,stnB - chrX 22992576 3` UTR,exon stnA -,stnB - chrX_24_22990001 chrX_22990001 RAL-307_125b 4208 chrX 22996268 22996336 chrX 23003550 23003609 roo 20 7279 6.0 10.0 8.0 2.2 7341 chrX 22996268 intron,intron stnA -,stnB - chrX 22999938 intron,intron stnA -,stnB - chrX 23003609 intron,intron stnA -,stnB - chrX_20_22995001 chrX_22995001 RAL-307_125b 4209 chrX 23036343 23036409 chrX 23037794 23037860 pogo 35 1450 7.5 9.5 8.5 3.7 1517 chrX 23036343 intron CG12061 + chrX 23037102 intron CG12061 + chrX 23037860 intron CG12061 + chrX_35_23035001 chrX_23035001 RAL-307_125b 4210 chrX 23045207 23045251 chrX 23045336 23045341 22 128 17.5 11.0 14.2 1.4 134 chrX 23045207 intron CG12061 + chrX 23045274 intron CG12061 + chrX 23045341 intron CG12061 + chrX_22_23045001 chrX_23045001 RAL-307_125b 4211 chrX 22967520 22967529 chrX 23154545 23154554 diver 5 187025 7.5 26.5 17.0 0.3 187034 chrX 22967520 intergenic not near genes chrX 23061037 intergenic not near genes chrX 23154554 intergenic not near genes chrX_5_23060001 chrX_23060001 RAL-307_125b 4212 chrY 655921 655940 chrY 656147 656166 4 226 3.0 2.0 2.5 1.1 245 chrY 655921 intron kl-2 + chrY 656044 intron kl-2 + chrY 656166 exon kl-2 + chrY_4_655001 chrY_655001 RAL-307_125b 4213 chrY 864716 864734 chrY 864832 864860 4 116 34.5 25.0 29.8 0.1 144 chrY 864716 intergenic not near genes chrY 864788 intergenic not near genes chrY 864860 intergenic not near genes chrY_4_860001 chrY_860001 RAL-307_125b 4214 chrY 975596 975821 chrY 975763 975978 16 177 132.5 114.5 123.5 0.1 382 chrY 975596 intergenic not near genes chrY 975787 intergenic not near genes chrY 975978 intergenic not near genes chrY_16_975001 chrY_975001 RAL-307_125b 4215 chrY 1420585 1420624 chrY 1420744 1420782 8 159 21.0 26.5 23.8 0.3 197 chrY 1420585 intergenic not near genes chrY 1420684 intergenic not near genes chrY 1420782 intergenic not near genes chrY_8_1420001 chrY_1420001 RAL-307_125b 4216 chrY 1445411 1445440 chrY 1447399 1447420 16 1980 23.5 26.5 25.0 0.6 2009 chrY 1445411 intergenic not near genes chrY 1446416 intergenic not near genes chrY 1447420 intergenic not near genes chrY_16_1445001 chrY_1445001 RAL-307_125b 4217 chrY 3561956 3562019 chrY 3562089 3562152 4 133 6.5 6.0 6.2 0.6 196 chrY 3561956 intergenic not near genes chrY 3562054 intergenic not near genes chrY 3562152 intergenic not near genes chrY_4_3560001 chrY_3560001 RAL-307_125b 4218 chrY 3664558 3664588 chrY 3664711 3664741 5 153 3.5 1.0 2.2 1.6 183 chrY 3664558 intergenic CG40948 + chrY 3664650 intergenic CG40948 + chrY 3664741 intergenic CG40948 + chrY_5_3660001 chrY_3660001 RAL-307_125b 4219 chrY 3666409 3666441 chrY 3666602 3666644 4 200 3.0 0.5 1.8 1.4 235 chrY 3666409 intergenic not near genes chrY 3666526 intergenic not near genes chrY 3666644 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-307_125b