SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46338 46341 chr2L 46441 46444 4 103 28.0 15.0 21.5 0.2 106 chr2L 46338 intron Cda5 - chr2L 46391 intron Cda5 - chr2L 46444 intron Cda5 - chr2L_4_45001 chr2L_45001 RAL-307_100b 2 chr2L 46343 46349 chr2L 46439 46452 5 102 24.5 14.0 19.2 0.2 109 chr2L 46343 intron Cda5 - chr2L 46398 intron Cda5 - chr2L 46452 intron Cda5 - chr2L_5_45001 chr2L_45001 RAL-307_100b 3 chr2L 46350 46384 chr2L 46437 46487 31 99 8.5 13.5 11.0 2.6 137 chr2L 46350 intron Cda5 - chr2L 46418 intron Cda5 - chr2L 46487 intron Cda5 - chr2L_31_45001 chr2L_45001 RAL-307_100b 4 chr2L 47440 47459 chr2L 52570 52589 jockey 27 5129 48.5 24.0 36.2 0.7 5149 chr2L 47440 intron Cda5 - chr2L 50014 intron Cda5 - chr2L 52589 intron Cda5 - chr2L_27_50001 chr2L_50001 RAL-307_100b 5 chr2L 47461 47486 chr2L 52569 52611 jockey 26 5124 38.5 23.0 30.8 0.8 5150 chr2L 47461 intron Cda5 - chr2L 50036 intron Cda5 - chr2L 52611 intron Cda5 - chr2L_26_50001 chr2L_50001 RAL-307_100b 6 chr2L 126920 126953 chr2L 127026 127059 33 105 28.0 12.0 20.0 1.6 139 chr2L 126920 intron,intron CG11455 +,CG3164 - chr2L 126990 intron,intron CG11455 +,CG3164 - chr2L 127059 intron,intron CG11455 +,CG3164 - chr2L_33_125001 chr2L_125001 RAL-307_100b 7 chr2L 126954 126976 chr2L 127025 127060 26 99 17.5 11.0 14.2 1.7 106 chr2L 126954 intron,intron CG11455 +,CG3164 - chr2L 127007 intron,intron CG11455 +,CG3164 - chr2L 127060 intron,intron CG11455 +,CG3164 - chr2L_26_125001 chr2L_125001 RAL-307_100b 8 chr2L 135572 135592 chr2L 135673 135693 13 99 30.0 16.0 23.0 0.5 121 chr2L 135572 intron,5` UTR CG11455 +,CR44185 + chr2L 135632 intron,5` UTR CG11455 +,CR44185 + chr2L 135693 intron,5` UTR CG11455 +,CR44185 + chr2L_13_135001 chr2L_135001 RAL-307_100b 9 chr2L 135593 135629 chr2L 135668 135708 32 90 16.0 14.5 15.2 2.0 115 chr2L 135593 intron,5` UTR CG11455 +,CR44185 + chr2L 135650 intron,5` UTR CG11455 +,CR44185 + chr2L 135708 intron,5` UTR CG11455 +,CR44185 + chr2L_32_135001 chr2L_135001 RAL-307_100b 10 chr2L 224690 224748 chr2L 224996 225047 61 301 10.5 12.5 11.5 4.9 357 chr2L 224690 intron,5` UTR kis -,CR44222 + chr2L 224868 intron kis - chr2L 225047 intron kis - chr2L_61_220001 chr2L_220001 RAL-307_100b 11 chr2L 287221 287275 chr2L 287327 287360 47 102 16.5 25.0 20.8 2.2 139 chr2L 287221 intron CG3625 - chr2L 287290 intron,3` UTR CG3625 -,Amnionless - chr2L 287360 intron,3` UTR CG3625 -,Amnionless - chr2L_47_285001 chr2L_285001 RAL-307_100b 12 chr2L 347863 347918 chr2L 355388 355443 blood 42 7523 13.0 17.0 15.0 2.6 7580 chr2L 347863 3` UTR Plc21C + chr2L 351653 intron Plc21C + chr2L 355443 3` UTR Plc21C + chr2L_42_350001 chr2L_350001 RAL-307_100b 13 chr2L 467337 467357 chr2L 467461 467480 19 123 33.5 33.5 33.5 0.6 143 chr2L 467337 intron CG4297 - chr2L 467408 intron CG4297 - chr2L 467480 intron CG4297 - chr2L_19_465001 chr2L_465001 RAL-307_100b 14 chr2L 597080 597137 chr2L 597183 597195 5 94 14.0 13.5 13.8 0.3 115 chr2L 597080 intergenic not near genes chr2L 597138 intergenic not near genes chr2L 597195 intergenic not near genes chr2L_5_595001 chr2L_595001 RAL-307_100b 15 chr2L 604964 605007 chr2L 605066 605118 35 106 9.0 16.5 12.8 2.5 154 chr2L 604964 intergenic not near genes chr2L 605041 intergenic not near genes chr2L 605118 intergenic not near genes chr2L_35_605001 chr2L_605001 RAL-307_100b 16 chr2L 686918 686951 chr2L 695958 696001 roo 36 9058 10.5 10.0 10.2 3.2 9083 chr2L 686918 intron ds - chr2L 691460 intron ds - chr2L 696001 intron ds - chr2L_36_690001 chr2L_690001 RAL-307_100b 17 chr2L 764528 764577 chr2L 764653 764702 40 123 12.5 13.0 12.8 2.9 174 chr2L 764528 intergenic not near genes chr2L 764615 intergenic not near genes chr2L 764702 intergenic not near genes chr2L_40_760001 chr2L_760001 RAL-307_100b 18 chr2L 770444 770452 chr2L 772250 772258 Bari1 9 1806 37.0 21.0 29.0 0.3 1814 chr2L 770444 intergenic not near genes chr2L 771351 intergenic not near genes chr2L 772258 intergenic CR44614 + chr2L_9_770001 chr2L_770001 RAL-307_100b 19 chr2L 770453 770494 chr2L 772244 772290 Bari1 45 1801 12.0 18.0 15.0 2.8 1837 chr2L 770453 intergenic not near genes chr2L 771372 intergenic not near genes chr2L 772290 intergenic CR44614 + chr2L_45_770001 chr2L_770001 RAL-307_100b 20 chr2L 781038 781069 chr2L 781140 781183 13 96 2.0 0.0 1.0 6.5 145 chr2L 781038 5` UTR Gr21a + chr2L 781110 5` UTR Gr21a + chr2L 781183 5` UTR Gr21a + chr2L_13_780001 chr2L_780001 RAL-307_100b 21 chr2L 781070 781098 chr2L 781139 781181 23 95 1.0 0.0 0.5 15.3 111 chr2L 781070 5` UTR Gr21a + chr2L 781126 5` UTR Gr21a + chr2L 781181 5` UTR Gr21a + chr2L_23_780001 chr2L_780001 RAL-307_100b 22 chr2L 877072 877112 chr2L 877159 877180 14 95 3.0 17.5 10.2 1.2 108 chr2L 877072 intergenic PNUTS +,CG15824 -,ninaA + chr2L 877126 intergenic CG15824 -,PNUTS +,ninaA + chr2L 877180 3` UTR CG15824 - chr2L_14_875001 chr2L_875001 RAL-307_100b 23 chr2L 892368 892428 chr2L 892509 892568 53 138 12.5 17.5 15.0 3.3 200 chr2L 892368 intergenic not near genes chr2L 892468 intergenic not near genes chr2L 892568 intergenic not near genes chr2L_53_890001 chr2L_890001 RAL-307_100b 24 chr2L 908802 908815 chr2L 908899 908907 5 103 27.5 0.0 13.8 0.3 105 chr2L 908802 intergenic not near genes chr2L 908854 intergenic not near genes chr2L 908907 intergenic not near genes chr2L_5_905001 chr2L_905001 RAL-307_100b 25 chr2L 922440 922496 chr2L 922546 922597 40 104 9.0 18.5 13.8 2.7 157 chr2L 922440 intergenic CG4341 + chr2L 922518 intergenic CG4341 + chr2L 922597 intergenic CG4341 + chr2L_40_920001 chr2L_920001 RAL-307_100b 26 chr2L 937032 937058 chr2L 937129 937159 23 99 17.5 14.5 16.0 1.4 127 chr2L 937032 intron CG4341 + chr2L 937096 intron CG4341 + chr2L 937159 intron CG4341 + chr2L_23_935001 chr2L_935001 RAL-307_100b 27 chr2L 937059 937065 chr2L 937125 937166 9 92 14.0 12.5 13.2 0.6 107 chr2L 937059 intron CG4341 + chr2L 937112 intron CG4341 + chr2L 937166 intron CG4341 + chr2L_9_935001 chr2L_935001 RAL-307_100b 28 chr2L 955990 955994 chr2L 956075 956088 4 105 0.0 17.0 8.5 0.4 98 chr2L 955990 intron CG4341 + chr2L 956039 intron CG4341 + chr2L 956088 intron CG4341 + chr2L_4_955001 chr2L_955001 RAL-307_100b 29 chr2L 976853 976913 chr2L 984514 984573 roo 37 7655 13.0 13.0 13.0 2.6 7720 chr2L 976853 intergenic not near genes chr2L 980713 intergenic not near genes chr2L 984573 intergenic not near genes chr2L_37_980001 chr2L_980001 RAL-307_100b 30 chr2L 996697 996748 chr2L 1005817 1005868 roo 30 9118 2.5 8.5 5.5 4.6 9171 chr2L 996697 intergenic not near genes chr2L 1001282 intergenic not near genes chr2L 1005868 intergenic not near genes chr2L_30_1000001 chr2L_1000001 RAL-307_100b 31 chr2L 1026170 1026179 chr2L 1026271 1026280 12 101 29.0 9.5 19.2 0.6 110 chr2L 1026170 intron,3` UTR IA-2 -,CG4375 - chr2L 1026225 intron,3` UTR IA-2 -,CG4375 - chr2L 1026280 intron,exon IA-2 -,CG4375 - chr2L_12_1025001 chr2L_1025001 RAL-307_100b 32 chr2L 1035537 1035539 chr2L 1035639 1035641 4 102 43.5 17.5 30.5 0.1 104 chr2L 1035537 intron IA-2 - chr2L 1035589 intron IA-2 - chr2L 1035641 intron IA-2 - chr2L_4_1035001 chr2L_1035001 RAL-307_100b 33 chr2L 1035540 1035594 chr2L 1035635 1035696 50 95 15.0 17.5 16.2 2.9 156 chr2L 1035540 intron IA-2 - chr2L 1035618 intron IA-2 - chr2L 1035696 intron IA-2 - chr2L_50_1035001 chr2L_1035001 RAL-307_100b 34 chr2L 1042593 1042608 chr2L 1042695 1042710 11 102 11.5 0.0 5.8 1.6 117 chr2L 1042593 intron IA-2 - chr2L 1042652 intron IA-2 - chr2L 1042710 intron IA-2 - chr2L_11_1040001 chr2L_1040001 RAL-307_100b 35 chr2L 1057475 1057477 chr2L 1057572 1057585 5 104 0.0 15.5 7.8 0.6 110 chr2L 1057475 intron S - chr2L 1057530 intron S - chr2L 1057585 intron S - chr2L_5_1055001 chr2L_1055001 RAL-307_100b 36 chr2L 1057478 1057523 chr2L 1057571 1057631 11 97 0.5 15.5 8.0 1.2 153 chr2L 1057478 intron S - chr2L 1057554 intron S - chr2L 1057631 intron S - chr2L_11_1055001 chr2L_1055001 RAL-307_100b 37 chr2L 1083675 1083722 chr2L 1083776 1083823 43 99 10.0 13.0 11.5 3.4 148 chr2L 1083675 3` UTR,3` UTR Atg4a +,CG4629 - chr2L 1083749 3` UTR,3` UTR Atg4a +,CG4629 - chr2L 1083823 3` UTR,3` UTR Atg4a +,CG4629 - chr2L_43_1080001 chr2L_1080001 RAL-307_100b 38 chr2L 1156833 1156886 chr2L 1156963 1157016 25 126 8.0 15.0 11.5 2.0 183 chr2L 1156833 intron capt - chr2L 1156924 intron capt - chr2L 1157016 intron capt - chr2L_25_1155001 chr2L_1155001 RAL-307_100b 39 chr2L 1220105 1220160 chr2L 1227596 1227651 blood 47 7489 15.5 15.5 15.5 2.8 7546 chr2L 1220105 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227651 intron CG42329 + chr2L_47_1220001 chr2L_1220001 RAL-307_100b 40 chr2L 1301750 1301782 chr2L 1302312 1302346 gypsy 8 561 0.0 28.0 14.0 0.5 596 chr2L 1301750 intergenic not near genes chr2L 1302048 intergenic not near genes chr2L 1302346 intergenic not near genes chr2L_8_1300001 chr2L_1300001 RAL-307_100b 41 chr2L 1320252 1320311 chr2L 1320355 1320396 62 96 18.5 17.5 18.0 3.3 144 chr2L 1320252 intergenic not near genes chr2L 1320324 intergenic not near genes chr2L 1320396 intergenic not near genes chr2L_62_1320001 chr2L_1320001 RAL-307_100b 42 chr2L 1399076 1399104 chr2L 1399204 1399232 17 127 14.0 16.0 15.0 1.1 156 chr2L 1399076 intron lea - chr2L 1399154 intron lea - chr2L 1399232 intron lea - chr2L_17_1395001 chr2L_1395001 RAL-307_100b 43 chr2L 1415075 1415133 chr2L 1415342 1415400 51 265 14.5 13.0 13.8 3.4 325 chr2L 1415075 intron lea - chr2L 1415238 intron lea - chr2L 1415400 intron lea - chr2L_51_1415001 chr2L_1415001 RAL-307_100b 44 chr2L 1508022 1508273 chr2L 1508130 1508385 93 106 13.5 13.5 13.5 6.4 363 chr2L 1508022 intergenic not near genes chr2L 1508204 intergenic not near genes chr2L 1508385 intergenic not near genes chr2L_93_1505001 chr2L_1505001 RAL-307_100b 45 chr2L 1525959 1525971 chr2L 1526056 1526071 11 100 33.0 17.5 25.2 0.4 112 chr2L 1525959 intergenic not near genes chr2L 1526015 intergenic not near genes chr2L 1526071 intergenic not near genes chr2L_11_1525001 chr2L_1525001 RAL-307_100b 46 chr2L 1525972 1526003 chr2L 1526055 1526111 40 97 10.0 17.5 13.8 2.7 139 chr2L 1525972 intergenic not near genes chr2L 1526042 intergenic not near genes chr2L 1526111 intergenic not near genes chr2L_40_1525001 chr2L_1525001 RAL-307_100b 47 chr2L 1529036 1529088 chr2L 1529152 1529204 12 114 14.5 1.5 8.0 1.3 168 chr2L 1529036 intergenic not near genes chr2L 1529120 intergenic not near genes chr2L 1529204 intergenic not near genes chr2L_12_1525001 chr2L_1525001 RAL-307_100b 48 chr2L 1534032 1534087 chr2L 1534387 1534442 62 354 12.0 12.0 12.0 4.8 410 chr2L 1534032 intergenic not near genes chr2L 1534237 intergenic not near genes chr2L 1534442 intergenic not near genes chr2L_62_1530001 chr2L_1530001 RAL-307_100b 49 chr2L 1536468 1536526 chr2L 1536625 1536683 25 152 0.0 13.5 6.8 3.2 215 chr2L 1536468 intergenic not near genes chr2L 1536576 intergenic not near genes chr2L 1536683 intergenic not near genes chr2L_25_1535001 chr2L_1535001 RAL-307_100b 50 chr2L 1552645 1552672 chr2L 1552891 1552903 24 245 25.5 0.0 12.8 1.7 258 chr2L 1552645 intergenic not near genes chr2L 1552774 intergenic not near genes chr2L 1552903 intergenic not near genes chr2L_24_1550001 chr2L_1550001 RAL-307_100b 51 chr2L 1570667 1570716 chr2L 1573564 1573613 F-element 51 2895 17.5 21.5 19.5 2.5 2946 chr2L 1570667 intron haf + chr2L 1572140 intron haf + chr2L 1573613 intron haf + chr2L_51_1570001 chr2L_1570001 RAL-307_100b 52 chr2L 1634739 1634763 chr2L 1634855 1634860 15 114 22.0 21.5 21.8 0.7 121 chr2L 1634739 intergenic not near genes chr2L 1634800 intergenic not near genes chr2L 1634860 intergenic not near genes chr2L_15_1630001 chr2L_1630001 RAL-307_100b 53 chr2L 1643378 1643381 chr2L 1643514 1643518 5 137 0.0 17.0 8.5 0.5 140 chr2L 1643378 intergenic not near genes chr2L 1643448 intergenic not near genes chr2L 1643518 intergenic not near genes chr2L_5_1640001 chr2L_1640001 RAL-307_100b 54 chr2L 1678954 1678986 chr2L 1686444 1686469 blood 30 7488 21.0 15.5 18.2 1.6 7515 chr2L 1678954 intron chinmo + chr2L 1682712 intron chinmo + chr2L 1686469 intron chinmo + chr2L_30_1680001 chr2L_1680001 RAL-307_100b 55 chr2L 1678987 1679005 chr2L 1686440 1686475 blood 19 7484 11.5 14.5 13.0 1.4 7488 chr2L 1678987 intron chinmo + chr2L 1682731 intron chinmo + chr2L 1686475 intron chinmo + chr2L_19_1680001 chr2L_1680001 RAL-307_100b 56 chr2L 1687000 1687060 chr2L 1687103 1687152 65 100 15.5 16.0 15.8 3.9 152 chr2L 1687000 intron chinmo + chr2L 1687076 intron chinmo + chr2L 1687152 intron chinmo + chr2L_65_1685001 chr2L_1685001 RAL-307_100b 57 chr2L 1711338 1711389 chr2L 1711679 1711692 mdg3 58 343 16.5 16.5 16.5 3.3 354 chr2L 1711338 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711515 3` UTR frtz - chr2L 1711692 3` UTR frtz - chr2L_58_1710001 chr2L_1710001 RAL-307_100b 58 chr2L 1716095 1716102 chr2L 1716184 1716211 12 104 15.5 14.5 15.0 0.8 116 chr2L 1716095 intergenic Rim2 -,frtz - chr2L 1716153 intergenic Rim2 -,frtz - chr2L 1716211 intergenic Rim2 -,frtz - chr2L_12_1715001 chr2L_1715001 RAL-307_100b 59 chr2L 1716103 1716114 chr2L 1716183 1716218 8 96 10.5 12.5 11.5 0.6 115 chr2L 1716103 intergenic Rim2 -,frtz - chr2L 1716160 intergenic Rim2 -,frtz - chr2L 1716218 intergenic Rim2 -,frtz - chr2L_8_1715001 chr2L_1715001 RAL-307_100b 60 chr2L 1721812 1721819 chr2L 1721921 1721927 5 109 1.0 11.0 6.0 0.7 115 chr2L 1721812 intron Rim2 - chr2L 1721870 intron Rim2 - chr2L 1721927 intron Rim2 - chr2L_5_1720001 chr2L_1720001 RAL-307_100b 61 chr2L 1721823 1721853 chr2L 1721906 1721962 19 105 0.5 5.0 2.8 5.0 139 chr2L 1721823 intron Rim2 - chr2L 1721892 intron Rim2 - chr2L 1721962 intron Rim2 - chr2L_19_1720001 chr2L_1720001 RAL-307_100b 62 chr2L 1744458 1744469 chr2L 1744568 1744579 7 109 0.0 32.0 16.0 0.4 121 chr2L 1744458 intron CG17646 + chr2L 1744518 intron CG17646 + chr2L 1744579 intron CG17646 + chr2L_7_1740001 chr2L_1740001 RAL-307_100b 63 chr2L 1828376 1828432 chr2L 1828485 1828541 62 106 16.5 13.0 14.8 3.9 165 chr2L 1828376 intergenic not near genes chr2L 1828458 intergenic not near genes chr2L 1828541 intergenic not near genes chr2L_62_1825001 chr2L_1825001 RAL-307_100b 64 chr2L 1883394 1883446 chr2L 1884001 1884051 16 601 0.5 13.5 7.0 2.0 657 chr2L 1883394 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884051 exon CG15358 - chr2L_16_1880001 chr2L_1880001 RAL-307_100b 65 chr2L 1905956 1906013 chr2L 1906071 1906128 45 114 11.5 13.5 12.5 3.3 172 chr2L 1905956 intron CG7337 + chr2L 1906042 intron CG7337 + chr2L 1906128 intron CG7337 + chr2L_45_1905001 chr2L_1905001 RAL-307_100b 66 chr2L 1933640 1933660 chr2L 1933746 1933751 10 104 23.0 12.0 17.5 0.5 111 chr2L 1933640 intron CG7337 + chr2L 1933696 intron CG7337 + chr2L 1933751 intron CG7337 + chr2L_10_1930001 chr2L_1930001 RAL-307_100b 67 chr2L 1933674 1933685 chr2L 1933744 1933791 13 103 8.0 11.5 9.8 1.2 117 chr2L 1933674 intron CG7337 + chr2L 1933732 intron CG7337 + chr2L 1933791 intron CG7337 + chr2L_13_1930001 chr2L_1930001 RAL-307_100b 68 chr2L 1973312 1973366 chr2L 1973488 1973541 69 174 12.5 16.0 14.2 4.5 229 chr2L 1973312 intergenic not near genes chr2L 1973426 intergenic not near genes chr2L 1973541 intergenic Der-1 + chr2L_69_1970001 chr2L_1970001 RAL-307_100b 69 chr2L 1993189 1993196 chr2L 1993300 1993307 5 111 24.0 23.0 23.5 0.2 118 chr2L 1993189 intergenic not near genes chr2L 1993248 intergenic not near genes chr2L 1993307 intergenic not near genes chr2L_5_1990001 chr2L_1990001 RAL-307_100b 70 chr2L 1993198 1993230 chr2L 1993292 1993340 24 105 10.5 19.5 15.0 1.5 142 chr2L 1993198 intergenic not near genes chr2L 1993269 intergenic not near genes chr2L 1993340 intergenic not near genes chr2L_24_1990001 chr2L_1990001 RAL-307_100b 71 chr2L 2007841 2007871 chr2L 2007974 2007999 27 131 9.0 22.0 15.5 1.6 158 chr2L 2007841 intergenic CR45712 + chr2L 2007920 intergenic CR45712 +,Nplp4 + chr2L 2007999 intergenic CR45712 +,Nplp4 + chr2L_27_2005001 chr2L_2005001 RAL-307_100b 72 chr2L 2016107 2016161 chr2L 2016212 2016266 26 102 10.0 12.5 11.2 2.1 159 chr2L 2016107 intron CG4238 + chr2L 2016186 intron CG4238 + chr2L 2016266 intron CG4238 + chr2L_26_2015001 chr2L_2015001 RAL-307_100b 73 chr2L 2047781 2047791 chr2L 2048001 2048011 9 219 38.0 0.0 19.0 0.5 230 chr2L 2047781 3` UTR Kebab + chr2L 2047896 3` UTR Kebab + chr2L 2048011 3` UTR Kebab + chr2L_9_2045001 chr2L_2045001 RAL-307_100b 74 chr2L 2047792 2047832 chr2L 2047999 2048025 23 211 12.5 0.0 6.2 3.2 233 chr2L 2047792 3` UTR Kebab + chr2L 2047908 3` UTR Kebab + chr2L 2048025 3` UTR Kebab + chr2L_23_2045001 chr2L_2045001 RAL-307_100b 75 chr2L 2070515 2070519 chr2L 2070661 2070665 4 146 37.5 17.5 27.5 0.1 150 chr2L 2070515 intron dpr3 - chr2L 2070590 intron dpr3 - chr2L 2070665 intron dpr3 - chr2L_4_2070001 chr2L_2070001 RAL-307_100b 76 chr2L 2070520 2070568 chr2L 2070659 2070714 57 142 14.5 17.5 16.0 3.4 194 chr2L 2070520 intron dpr3 - chr2L 2070617 intron dpr3 - chr2L 2070714 intron dpr3 - chr2L_57_2070001 chr2L_2070001 RAL-307_100b 77 chr2L 2097714 2097740 chr2L 2097881 2097935 25 190 8.0 17.0 12.5 1.9 221 chr2L 2097714 intron dpr3 - chr2L 2097824 intron dpr3 - chr2L 2097935 intron dpr3 - chr2L_25_2095001 chr2L_2095001 RAL-307_100b 78 chr2L 2100375 2100387 chr2L 2109529 2109552 roo 16 9167 35.5 24.0 29.8 0.5 9177 chr2L 2100375 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109552 intron dpr3 - chr2L_16_2100001 chr2L_2100001 RAL-307_100b 79 chr2L 2100388 2100408 chr2L 2109524 2109549 roo 15 9160 20.0 21.5 20.8 0.7 9161 chr2L 2100388 intron dpr3 - chr2L 2104968 intron dpr3 - chr2L 2109549 intron dpr3 - chr2L_15_2100001 chr2L_2100001 RAL-307_100b 80 chr2L 2112086 2112145 chr2L 2119773 2119812 opus 20 7673 3.0 16.5 9.8 1.9 7726 chr2L 2112086 intergenic not near genes chr2L 2115949 intergenic not near genes chr2L 2119812 intergenic not near genes chr2L_20_2115001 chr2L_2115001 RAL-307_100b 81 chr2L 2134169 2134222 chr2L 2134322 2134350 33 145 14.5 0.5 7.5 3.9 181 chr2L 2134169 intron GlyP + chr2L 2134260 intron GlyP + chr2L 2134350 intron GlyP + chr2L_33_2130001 chr2L_2130001 RAL-307_100b 82 chr2L 2165589 2165634 chr2L 2166206 2166251 56 614 13.0 16.0 14.5 3.6 662 chr2L 2165589 intron aop - chr2L 2165920 intron aop - chr2L 2166251 intron aop - chr2L_56_2165001 chr2L_2165001 RAL-307_100b 83 chr2L 2195173 2195180 chr2L 2195284 2195291 11 111 0.0 17.0 8.5 1.2 118 chr2L 2195173 intron CG34172 - chr2L 2195232 intron CG34172 - chr2L 2195291 intron CG34172 - chr2L_11_2195001 chr2L_2195001 RAL-307_100b 84 chr2L 2250396 2250445 chr2L 2251185 2251224 24 787 19.0 0.0 9.5 2.3 828 chr2L 2250396 intergenic Ser12 - chr2L 2250810 exon Ser12 - chr2L 2251224 exon Ser12 - chr2L_24_2250001 chr2L_2250001 RAL-307_100b 85 chr2L 2256448 2256478 chr2L 2256552 2256583 26 102 10.0 15.5 12.8 1.9 135 chr2L 2256448 intergenic not near genes chr2L 2256516 intergenic not near genes chr2L 2256583 intergenic not near genes chr2L_26_2255001 chr2L_2255001 RAL-307_100b 86 chr2L 2260781 2260832 chr2L 2260892 2260909 56 107 13.5 17.0 15.2 3.5 128 chr2L 2260781 intergenic not near genes chr2L 2260845 intergenic not near genes chr2L 2260909 intergenic not near genes chr2L_56_2260001 chr2L_2260001 RAL-307_100b 87 chr2L 2262284 2262330 chr2L 2262386 2262411 32 98 18.5 11.0 14.8 2.0 127 chr2L 2262284 intergenic not near genes chr2L 2262348 intergenic not near genes chr2L 2262411 intergenic not near genes chr2L_32_2260001 chr2L_2260001 RAL-307_100b 88 chr2L 2294017 2294075 chr2L 2299247 2299289 copia 40 5219 7.5 18.0 12.8 2.9 5272 chr2L 2294017 intergenic not near genes chr2L 2296653 intergenic not near genes chr2L 2299289 intergenic not near genes chr2L_40_2295001 chr2L_2295001 RAL-307_100b 89 chr2L 2305099 2305146 chr2L 2305214 2305219 46 116 14.5 16.5 15.5 2.8 120 chr2L 2305099 intergenic not near genes chr2L 2305159 intergenic not near genes chr2L 2305219 intergenic not near genes chr2L_46_2305001 chr2L_2305001 RAL-307_100b 90 chr2L 2317096 2317132 chr2L 2317292 2317328 17 195 70.0 67.5 68.8 0.2 232 chr2L 2317096 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317328 intron,intron CG9967 -,eys + chr2L_17_2315001 chr2L_2315001 RAL-307_100b 91 chr2L 2372341 2372400 chr2L 2372452 2372505 33 110 0.0 13.5 6.8 4.2 164 chr2L 2372341 intergenic CG3609 - chr2L 2372423 intergenic CG3609 - chr2L 2372505 3` UTR CG3609 - chr2L_33_2370001 chr2L_2370001 RAL-307_100b 92 chr2L 2373807 2373853 chr2L 2374352 2374398 26 543 8.5 14.5 11.5 2.1 591 chr2L 2373807 intron CG3609 - chr2L 2374102 intron CG3609 - chr2L 2374398 intron CG3609 - chr2L_26_2370001 chr2L_2370001 RAL-307_100b 93 chr2L 2396040 2396096 chr2L 2396165 2396223 51 117 14.5 5.5 10.0 4.6 183 chr2L 2396040 intron VGlut + chr2L 2396132 intron VGlut + chr2L 2396223 intron VGlut + chr2L_51_2395001 chr2L_2395001 RAL-307_100b 94 chr2L 2450555 2450605 chr2L 2450657 2450707 38 99 9.5 12.0 10.8 3.2 152 chr2L 2450555 intron dpp + chr2L 2450631 intron dpp + chr2L 2450707 intron dpp + chr2L_38_2450001 chr2L_2450001 RAL-307_100b 95 chr2L 2500356 2500364 chr2L 2500501 2500509 6 145 40.5 18.0 29.2 0.2 153 chr2L 2500356 intergenic not near genes chr2L 2500432 intergenic not near genes chr2L 2500509 intergenic not near genes chr2L_6_2500001 chr2L_2500001 RAL-307_100b 96 chr2L 2500367 2500414 chr2L 2500496 2500520 47 136 12.5 15.5 14.0 3.1 153 chr2L 2500367 intergenic not near genes chr2L 2500444 intergenic not near genes chr2L 2500520 intergenic not near genes chr2L_47_2500001 chr2L_2500001 RAL-307_100b 97 chr2L 2511700 2511761 chr2L 2511816 2511865 12 113 9.0 5.0 7.0 1.5 165 chr2L 2511700 intergenic not near genes chr2L 2511782 intergenic not near genes chr2L 2511865 intergenic not near genes chr2L_12_2510001 chr2L_2510001 RAL-307_100b 98 chr2L 2517252 2517307 chr2L 2517520 2517565 54 265 13.0 19.0 16.0 3.2 313 chr2L 2517252 exon CG3528 - chr2L 2517408 exon CG3528 - chr2L 2517565 exon CG3528 - chr2L_54_2515001 chr2L_2515001 RAL-307_100b 99 chr2L 2547960 2548015 chr2L 2549143 2549198 43 1184 17.5 141.0 79.2 0.5 1238 chr2L 2547960 intergenic not near genes chr2L 2548579 intergenic not near genes chr2L 2549198 intergenic not near genes chr2L_43_2545001 chr2L_2545001 RAL-307_100b 100 chr2L 2557199 2557203 chr2L 2557300 2557304 4 101 16.0 26.0 21.0 0.2 105 chr2L 2557199 intergenic not near genes chr2L 2557252 intergenic not near genes chr2L 2557304 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-307_100b 101 chr2L 2557208 2557216 chr2L 2557289 2557317 4 96 8.5 21.0 14.8 0.3 109 chr2L 2557208 intergenic not near genes chr2L 2557262 intergenic not near genes chr2L 2557317 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-307_100b 102 chr2L 2565529 2565561 chr2L 2571627 2571659 297 29 6096 12.0 22.0 17.0 1.6 6130 chr2L 2565529 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571659 exon Cyp309a2 - chr2L_29_2565001 chr2L_2565001 RAL-307_100b 103 chr2L 2613394 2613400 chr2L 2613458 2613504 17 92 12.0 12.5 12.2 1.3 110 chr2L 2613394 intergenic not near genes chr2L 2613449 intergenic not near genes chr2L 2613504 intergenic not near genes chr2L_17_2610001 chr2L_2610001 RAL-307_100b 104 chr2L 2613401 2613409 chr2L 2613457 2613470 6 86 11.0 11.0 11.0 0.5 69 chr2L 2613401 intergenic not near genes chr2L 2613436 intergenic not near genes chr2L 2613470 intergenic not near genes chr2L_6_2610001 chr2L_2610001 RAL-307_100b 105 chr2L 2661177 2661201 chr2L 2663033 2663064 I-element 12 1856 36.5 17.0 26.8 0.4 1887 chr2L 2661177 intergenic not near genes chr2L 2662120 intergenic not near genes chr2L 2663064 intergenic not near genes chr2L_12_2660001 chr2L_2660001 RAL-307_100b 106 chr2L 2661205 2661220 chr2L 2663032 2663056 I-element 10 1845 22.0 16.5 19.2 0.5 1851 chr2L 2661205 intergenic not near genes chr2L 2662130 intergenic not near genes chr2L 2663056 intergenic not near genes chr2L_10_2660001 chr2L_2660001 RAL-307_100b 107 chr2L 2661221 2661232 chr2L 2663030 2663070 I-element 21 1837 17.0 15.5 16.2 1.2 1849 chr2L 2661221 intergenic not near genes chr2L 2662146 intergenic not near genes chr2L 2663070 intergenic not near genes chr2L_21_2660001 chr2L_2660001 RAL-307_100b 108 chr2L 2698840 2698895 chr2L 2698952 2699007 54 109 3.0 9.0 6.0 7.7 167 chr2L 2698840 intron CG31690 + chr2L 2698924 intron CG31690 + chr2L 2699007 intron CG31690 + chr2L_54_2695001 chr2L_2695001 RAL-307_100b 109 chr2L 2703420 2703439 chr2L 2703529 2703548 21 108 19.5 40.5 30.0 0.7 128 chr2L 2703420 intron CG31690 + chr2L 2703484 intron CG31690 + chr2L 2703548 intron CG31690 + chr2L_21_2700001 chr2L_2700001 RAL-307_100b 110 chr2L 2715663 2715690 chr2L 2715764 2715780 23 99 20.5 9.5 15.0 1.4 117 chr2L 2715663 intron CG31690 + chr2L 2715722 intron CG31690 + chr2L 2715780 intron CG31690 + chr2L_23_2715001 chr2L_2715001 RAL-307_100b 111 chr2L 2715691 2715698 chr2L 2715762 2715799 8 96 17.0 9.0 13.0 0.6 108 chr2L 2715691 intron CG31690 + chr2L 2715745 intron CG31690 + chr2L 2715799 intron CG31690 + chr2L_8_2715001 chr2L_2715001 RAL-307_100b 112 chr2L 2722029 2722053 chr2L 2722636 2722661 16 612 2.0 13.5 7.8 1.8 632 chr2L 2722029 intergenic not near genes chr2L 2722345 intergenic not near genes chr2L 2722661 intergenic not near genes chr2L_16_2720001 chr2L_2720001 RAL-307_100b 113 chr2L 2724380 2724436 chr2L 2724481 2724537 28 100 9.5 14.0 11.8 2.2 157 chr2L 2724380 intergenic not near genes chr2L 2724458 intergenic not near genes chr2L 2724537 intergenic not near genes chr2L_28_2720001 chr2L_2720001 RAL-307_100b 114 chr2L 2772587 2772627 chr2L 2779196 2779196 297 30 6604 15.0 18.0 16.5 1.7 6609 chr2L 2772587 3` UTR Syt1 - chr2L 2775892 intron Syt1 - chr2L 2779196 3` UTR Syt1 - chr2L_30_2775001 chr2L_2775001 RAL-307_100b 115 chr2L 2786080 2786133 chr2L 2786192 2786245 36 109 19.5 13.5 16.5 2.1 165 chr2L 2786080 intron Syt1 - chr2L 2786162 intron Syt1 - chr2L 2786245 intron Syt1 - chr2L_36_2785001 chr2L_2785001 RAL-307_100b 116 chr2L 2826513 2826576 chr2L 2826630 2826686 51 111 3.5 16.5 10.0 4.6 173 chr2L 2826513 intron Duox - chr2L 2826600 intron Duox - chr2L 2826686 intron Duox - chr2L_51_2825001 chr2L_2825001 RAL-307_100b 117 chr2L 2830397 2830423 chr2L 2830551 2830578 13 155 6.0 11.5 8.8 1.3 181 chr2L 2830397 intergenic Duox - chr2L 2830488 intergenic Duox - chr2L 2830578 intergenic Duox - chr2L_13_2830001 chr2L_2830001 RAL-307_100b 118 chr2L 2857795 2857834 chr2L 2857896 2857915 20 99 7.5 6.5 7.0 2.5 120 chr2L 2857795 intron CG2991 + chr2L 2857855 intron CG2991 + chr2L 2857915 intron CG2991 + chr2L_20_2855001 chr2L_2855001 RAL-307_100b 119 chr2L 2873413 2873469 chr2L 2873516 2873572 17 101 0.0 11.0 5.5 2.6 159 chr2L 2873413 intron CG31694 - chr2L 2873492 intron CG31694 - chr2L 2873572 intron CG31694 - chr2L_17_2870001 chr2L_2870001 RAL-307_100b 120 chr2L 2885347 2885396 chr2L 2885449 2885498 44 101 10.0 12.5 11.2 3.6 151 chr2L 2885347 intron NTPase - chr2L 2885422 intron NTPase - chr2L 2885498 intron NTPase - chr2L_44_2885001 chr2L_2885001 RAL-307_100b 121 chr2L 2891574 2891634 chr2L 2891730 2891790 34 154 12.0 12.5 12.2 2.6 216 chr2L 2891574 intron lilli + chr2L 2891682 intron lilli + chr2L 2891790 intron lilli + chr2L_34_2890001 chr2L_2890001 RAL-307_100b 122 chr2L 2937393 2937451 chr2L 2937495 2937553 66 101 9.0 7.5 8.2 7.2 160 chr2L 2937393 intron lilli + chr2L 2937473 intron lilli + chr2L 2937553 intron lilli + chr2L_66_2935001 chr2L_2935001 RAL-307_100b 123 chr2L 3073008 3073033 chr2L 3078236 3078261 copia 27 5228 30.0 15.0 22.5 1.1 5253 chr2L 3073008 intron toc - chr2L 3075634 intron toc - chr2L 3078261 intron toc - chr2L_27_3075001 chr2L_3075001 RAL-307_100b 124 chr2L 3073034 3073060 chr2L 3078232 3078288 copia 29 5226 14.0 13.5 13.8 2.0 5254 chr2L 3073034 intron toc - chr2L 3075661 intron toc - chr2L 3078288 intron toc - chr2L_29_3075001 chr2L_3075001 RAL-307_100b 125 chr2L 3108840 3108899 chr2L 3108942 3109001 75 98 12.5 11.0 11.8 5.9 161 chr2L 3108840 exon toc - chr2L 3108920 intron toc - chr2L 3109001 intron toc - chr2L_75_3105001 chr2L_3105001 RAL-307_100b 126 chr2L 3117373 3117424 chr2L 3117691 3117737 38 311 10.5 15.0 12.8 2.8 364 chr2L 3117373 intron toc - chr2L 3117555 intron toc - chr2L 3117737 intron toc - chr2L_38_3115001 chr2L_3115001 RAL-307_100b 127 chr2L 3121963 3121972 chr2L 3122074 3122083 12 110 28.5 14.5 21.5 0.5 120 chr2L 3121963 intron toc - chr2L 3122023 intron toc - chr2L 3122083 intron toc - chr2L_12_3120001 chr2L_3120001 RAL-307_100b 128 chr2L 3121973 3121989 chr2L 3122073 3122100 17 106 22.0 14.0 18.0 0.9 127 chr2L 3121973 intron toc - chr2L 3122036 intron toc - chr2L 3122100 intron toc - chr2L_17_3120001 chr2L_3120001 RAL-307_100b 129 chr2L 3121990 3121999 chr2L 3122071 3122110 11 100 16.0 13.5 14.8 0.7 120 chr2L 3121990 intron toc - chr2L 3122050 intron toc - chr2L 3122110 intron toc - chr2L_11_3120001 chr2L_3120001 RAL-307_100b 130 chr2L 3141375 3141429 chr2L 3141958 3142012 56 579 14.5 8.0 11.2 4.6 637 chr2L 3141375 intron toc - chr2L 3141694 intron toc - chr2L 3142012 intron toc - chr2L_56_3140001 chr2L_3140001 RAL-307_100b 131 chr2L 3159687 3159700 chr2L 3159788 3159801 9 101 8.0 12.0 10.0 0.8 114 chr2L 3159687 intergenic Mad -,gkt + chr2L 3159744 intergenic Mad -,gkt + chr2L 3159801 intergenic gkt +,Mad - chr2L_9_3155001 chr2L_3155001 RAL-307_100b 132 chr2L 3185071 3185099 chr2L 3185172 3185200 28 100 10.0 0.0 5.0 4.7 129 chr2L 3185071 exon CG34393 - chr2L 3185136 intron CG34393 - chr2L 3185200 intron CG34393 - chr2L_28_3185001 chr2L_3185001 RAL-307_100b 133 chr2L 3186445 3186502 chr2L 3186556 3186613 49 108 9.5 16.0 12.8 3.6 168 chr2L 3186445 intron CG34393 - chr2L 3186529 intron CG34393 - chr2L 3186613 intron CG34393 - chr2L_49_3185001 chr2L_3185001 RAL-307_100b 134 chr2L 3192188 3192240 chr2L 3192318 3192372 44 128 11.5 23.0 17.2 2.4 184 chr2L 3192188 exon CG34393 - chr2L 3192280 intron CG34393 - chr2L 3192372 intron CG34393 - chr2L_44_3190001 chr2L_3190001 RAL-307_100b 135 chr2L 3202719 3202723 chr2L 3210173 3210177 mdg1 5 7454 33.0 1.0 17.0 0.3 7458 chr2L 3202719 intergenic not near genes chr2L 3206448 intergenic not near genes chr2L 3210177 intergenic CR45336 + chr2L_5_3205001 chr2L_3205001 RAL-307_100b 136 chr2L 3202724 3202770 chr2L 3210170 3210224 mdg1 32 7452 11.5 1.0 6.2 4.4 7500 chr2L 3202724 intergenic not near genes chr2L 3206474 intergenic not near genes chr2L 3210224 intergenic CR45336 + chr2L_32_3205001 chr2L_3205001 RAL-307_100b 137 chr2L 3251470 3251526 chr2L 3259060 3259104 springer 47 7588 7.0 16.0 11.5 3.8 7634 chr2L 3251470 intergenic not near genes chr2L 3255287 intergenic not near genes chr2L 3259104 intergenic not near genes chr2L_47_3255001 chr2L_3255001 RAL-307_100b 138 chr2L 3261488 3261511 chr2L 3261605 3261628 24 115 10.5 29.0 19.8 1.2 140 chr2L 3261488 intergenic CR45338 -,CR45337 - chr2L 3261558 intergenic CR45338 -,CR45337 - chr2L 3261628 intergenic CR45338 -,CR45337 - chr2L_24_3260001 chr2L_3260001 RAL-307_100b 139 chr2L 3272945 3272969 chr2L 3273046 3273078 4 105 4.0 0.0 2.0 1.3 133 chr2L 3272945 intergenic not near genes chr2L 3273012 intergenic not near genes chr2L 3273078 intergenic not near genes chr2L_4_3270001 chr2L_3270001 RAL-307_100b 140 chr2L 3291211 3291269 chr2L 3291316 3291343 33 98 13.5 21.0 17.2 1.8 132 chr2L 3291211 intergenic CG9664 - chr2L 3291277 3` UTR CG9664 - chr2L 3291343 3` UTR CG9664 - chr2L_33_3290001 chr2L_3290001 RAL-307_100b 141 chr2L 3388576 3388630 chr2L 3388839 3388896 pogo 49 265 12.5 14.5 13.5 3.4 320 chr2L 3388576 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388896 intergenic CG42460 -,CR44791 + chr2L_49_3385001 chr2L_3385001 RAL-307_100b 142 chr2L 3401844 3401853 chr2L 3401961 3401970 4 117 32.5 16.0 24.2 0.2 126 chr2L 3401844 intergenic not near genes chr2L 3401907 intergenic not near genes chr2L 3401970 intergenic not near genes chr2L_4_3400001 chr2L_3400001 RAL-307_100b 143 chr2L 3401854 3401858 chr2L 3401956 3401965 4 107 28.0 15.5 21.8 0.2 111 chr2L 3401854 intergenic not near genes chr2L 3401910 intergenic not near genes chr2L 3401965 intergenic not near genes chr2L_4_3400001 chr2L_3400001 RAL-307_100b 144 chr2L 3401859 3401898 chr2L 3401955 3402015 40 112 8.0 15.0 11.5 3.2 156 chr2L 3401859 intergenic not near genes chr2L 3401937 intergenic not near genes chr2L 3402015 intergenic not near genes chr2L_40_3400001 chr2L_3400001 RAL-307_100b 145 chr2L 3432418 3432457 chr2L 3432509 3432559 45 100 1.0 15.0 8.0 5.0 141 chr2L 3432418 intergenic not near genes chr2L 3432488 intergenic not near genes chr2L 3432559 intergenic not near genes chr2L_45_3430001 chr2L_3430001 RAL-307_100b 146 chr2L 3432458 3432463 chr2L 3432508 3432565 11 92 1.0 15.0 8.0 1.2 107 chr2L 3432458 intergenic not near genes chr2L 3432512 intergenic not near genes chr2L 3432565 intergenic not near genes chr2L_11_3430001 chr2L_3430001 RAL-307_100b 147 chr2L 3482125 3482174 chr2L 3482240 3482289 40 112 12.0 13.0 12.5 3.0 164 chr2L 3482125 intron CG15414 - chr2L 3482207 intron CG15414 - chr2L 3482289 intron CG15414 - chr2L_40_3480001 chr2L_3480001 RAL-307_100b 148 chr2L 3536788 3536795 chr2L 3536885 3536898 11 102 37.5 16.0 26.8 0.4 110 chr2L 3536788 intergenic not near genes chr2L 3536843 intergenic not near genes chr2L 3536898 intergenic not near genes chr2L_11_3535001 chr2L_3535001 RAL-307_100b 149 chr2L 3536796 3536841 chr2L 3536884 3536902 43 97 13.0 15.5 14.2 2.8 106 chr2L 3536796 intergenic not near genes chr2L 3536849 intergenic not near genes chr2L 3536902 intergenic not near genes chr2L_43_3535001 chr2L_3535001 RAL-307_100b 150 chr2L 3548561 3548612 chr2L 3548665 3548716 43 102 11.5 13.0 12.2 3.3 155 chr2L 3548561 intergenic drm + chr2L 3548638 intergenic drm + chr2L 3548716 intergenic drm + chr2L_43_3545001 chr2L_3545001 RAL-307_100b 151 chr2L 3584647 3584680 chr2L 3584749 3584782 14 101 25.0 10.5 17.8 0.7 135 chr2L 3584647 intergenic not near genes chr2L 3584714 intergenic not near genes chr2L 3584782 intergenic not near genes chr2L_14_3580001 chr2L_3580001 RAL-307_100b 152 chr2L 3584682 3584704 chr2L 3584747 3584806 23 98 16.0 9.5 12.8 1.7 124 chr2L 3584682 intergenic not near genes chr2L 3584744 intergenic not near genes chr2L 3584806 intergenic not near genes chr2L_23_3580001 chr2L_3580001 RAL-307_100b 153 chr2L 3591819 3591830 chr2L 3591914 3591931 12 98 33.0 20.0 26.5 0.4 112 chr2L 3591819 intergenic not near genes chr2L 3591875 intergenic not near genes chr2L 3591931 intergenic not near genes chr2L_12_3590001 chr2L_3590001 RAL-307_100b 154 chr2L 3591832 3591873 chr2L 3591913 3591920 39 90 19.5 20.0 19.8 1.9 88 chr2L 3591832 intergenic not near genes chr2L 3591876 intergenic not near genes chr2L 3591920 intergenic not near genes chr2L_39_3590001 chr2L_3590001 RAL-307_100b 155 chr2L 3611406 3611441 chr2L 3611510 3611513 8 95 17.0 0.0 8.5 0.8 107 chr2L 3611406 intergenic not near genes chr2L 3611460 intergenic not near genes chr2L 3611513 intergenic not near genes chr2L_8_3610001 chr2L_3610001 RAL-307_100b 156 chr2L 3632245 3632277 chr2L 3632342 3632379 19 100 1.5 2.5 2.0 6.3 134 chr2L 3632245 intron for - chr2L 3632312 intron for - chr2L 3632379 intron for - chr2L_19_3630001 chr2L_3630001 RAL-307_100b 157 chr2L 3634087 3634090 chr2L 3634189 3634197 4 106 34.5 15.0 24.8 0.2 110 chr2L 3634087 intron for - chr2L 3634142 intron for - chr2L 3634197 intron for - chr2L_4_3630001 chr2L_3630001 RAL-307_100b 158 chr2L 3634092 3634134 chr2L 3634188 3634241 52 105 16.0 15.0 15.5 3.2 149 chr2L 3634092 intron for - chr2L 3634166 intron for - chr2L 3634241 exon for - chr2L_52_3630001 chr2L_3630001 RAL-307_100b 159 chr2L 3649764 3649816 chr2L 3654992 3655041 copia 34 5227 15.0 18.0 16.5 1.9 5277 chr2L 3649764 intron for - chr2L 3652402 intron for - chr2L 3655041 intron for - chr2L_34_3650001 chr2L_3650001 RAL-307_100b 160 chr2L 3667965 3668065 chr2L 3668065 3668166 20 99 0.5 0.0 0.2 16.7 201 chr2L 3667965 intron CG34340 + chr2L 3668066 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668166 intron,exon CG34340 +,Sfp24Ba - chr2L_20_3665001 chr2L_3665001 RAL-307_100b 161 chr2L 3705350 3705407 chr2L 3705457 3705499 53 104 14.0 17.0 15.5 3.2 149 chr2L 3705350 5` UTR CG31778 - chr2L 3705424 5` UTR CG31778 - chr2L 3705499 intergenic CG31778 - chr2L_53_3705001 chr2L_3705001 RAL-307_100b 162 chr2L 3784779 3784826 chr2L 3785663 3785687 25 882 72.0 66.0 69.0 0.4 908 chr2L 3784779 intergenic CG31960 + chr2L 3785233 exon CG31960 + chr2L 3785687 intergenic CG31958 +,CG31960 + chr2L_25_3785001 chr2L_3785001 RAL-307_100b 163 chr2L 3784699 3784701 chr2L 3785610 3785612 4 911 92.5 83.0 87.8 0.0 913 chr2L 3784699 intergenic CG31960 + chr2L 3785156 exon CG31960 + chr2L 3785612 3` UTR CG31960 + chr2L_4_3785001 chr2L_3785001 RAL-307_100b 164 chr2L 3784702 3784722 chr2L 3785618 3785636 20 914 95.5 79.0 87.2 0.2 934 chr2L 3784702 intergenic CG31960 + chr2L 3785169 exon CG31960 + chr2L 3785636 intergenic CG31960 +,CG31958 + chr2L_20_3785001 chr2L_3785001 RAL-307_100b 165 chr2L 3784717 3784747 chr2L 3786375 3786379 8 1642 99.0 52.5 75.8 0.1 1662 chr2L 3784717 intergenic CG31960 + chr2L 3785548 3` UTR CG31960 + chr2L 3786379 intergenic CG31958 + chr2L_8_3785001 chr2L_3785001 RAL-307_100b 166 chr2L 3787629 3787676 chr2L 3787768 3787815 41 137 12.0 13.5 12.8 3.0 186 chr2L 3787629 intron CG3921 + chr2L 3787722 intron CG3921 + chr2L 3787815 intron CG3921 + chr2L_41_3785001 chr2L_3785001 RAL-307_100b 167 chr2L 3788385 3788398 chr2L 3788505 3788518 9 120 11.0 10.0 10.5 0.8 133 chr2L 3788385 intron CG3921 + chr2L 3788452 intron CG3921 + chr2L 3788518 intron CG3921 + chr2L_9_3785001 chr2L_3785001 RAL-307_100b 168 chr2L 3815143 3815197 chr2L 3815240 3815310 38 98 11.5 3.0 7.2 4.6 167 chr2L 3815143 intergenic CR44076 + chr2L 3815226 intergenic CR44076 + chr2L 3815310 intergenic CR44076 + chr2L_38_3815001 chr2L_3815001 RAL-307_100b 169 chr2L 3831812 3831864 chr2L 3831918 3831970 32 106 16.5 11.5 14.0 2.1 158 chr2L 3831812 intergenic not near genes chr2L 3831891 intergenic not near genes chr2L 3831970 intergenic not near genes chr2L_32_3830001 chr2L_3830001 RAL-307_100b 170 chr2L 3898242 3898306 chr2L 3898353 3898405 17 107 1.0 11.5 6.2 2.4 163 chr2L 3898242 intron capu - chr2L 3898324 intron capu - chr2L 3898405 intron capu - chr2L_17_3895001 chr2L_3895001 RAL-307_100b 171 chr2L 3936630 3936656 chr2L 3936735 3936761 13 105 7.0 20.5 13.8 0.9 131 chr2L 3936630 intron fred - chr2L 3936696 intron fred - chr2L 3936761 intron fred - chr2L_13_3935001 chr2L_3935001 RAL-307_100b 172 chr2L 3974698 3974757 chr2L 3974839 3974898 60 137 12.5 14.0 13.2 4.2 200 chr2L 3974698 intron fred - chr2L 3974798 intron fred - chr2L 3974898 intron fred - chr2L_60_3970001 chr2L_3970001 RAL-307_100b 173 chr2L 4026267 4026306 chr2L 4026415 4026468 21 149 9.5 17.5 13.5 1.4 201 chr2L 4026267 intergenic not near genes chr2L 4026368 intergenic not near genes chr2L 4026468 intergenic not near genes chr2L_21_4025001 chr2L_4025001 RAL-307_100b 174 chr2L 4037775 4037809 chr2L 4037887 4037921 31 111 12.5 10.0 11.2 2.5 146 chr2L 4037775 intron ed + chr2L 4037848 intron ed + chr2L 4037921 intron ed + chr2L_31_4035001 chr2L_4035001 RAL-307_100b 175 chr2L 4039006 4039013 chr2L 4039092 4039114 5 98 11.0 22.5 16.8 0.3 108 chr2L 4039006 intron ed + chr2L 4039060 intron ed + chr2L 4039114 intron ed + chr2L_5_4035001 chr2L_4035001 RAL-307_100b 176 chr2L 4048008 4048068 chr2L 4048261 4048316 41 248 13.0 13.5 13.2 2.9 308 chr2L 4048008 intron ed + chr2L 4048162 intron ed + chr2L 4048316 intron ed + chr2L_41_4045001 chr2L_4045001 RAL-307_100b 177 chr2L 4066020 4066052 chr2L 4068870 4068897 Juan 30 2846 21.5 17.0 19.2 1.5 2877 chr2L 4066020 intron ed + chr2L 4067458 intron ed + chr2L 4068897 intron ed + chr2L_30_4065001 chr2L_4065001 RAL-307_100b 178 chr2L 4066053 4066058 chr2L 4068864 4068908 Juan 6 2839 20.0 15.5 17.8 0.3 2855 chr2L 4066053 intron ed + chr2L 4067480 intron ed + chr2L 4068908 intron ed + chr2L_6_4065001 chr2L_4065001 RAL-307_100b 179 chr2L 4147944 4147948 chr2L 4148045 4148049 5 101 15.5 14.5 15.0 0.3 105 chr2L 4147944 intergenic not near genes chr2L 4147996 intergenic not near genes chr2L 4148049 intergenic not near genes chr2L_5_4145001 chr2L_4145001 RAL-307_100b 180 chr2L 4147949 4147961 chr2L 4148044 4148062 12 100 9.5 14.5 12.0 0.9 113 chr2L 4147949 intergenic not near genes chr2L 4148006 intergenic not near genes chr2L 4148062 intergenic not near genes chr2L_12_4145001 chr2L_4145001 RAL-307_100b 181 chr2L 4150602 4150620 chr2L 4150707 4150725 8 105 12.0 14.0 13.0 0.6 123 chr2L 4150602 exon CG2955 + chr2L 4150664 exon CG2955 + chr2L 4150725 exon CG2955 + chr2L_8_4150001 chr2L_4150001 RAL-307_100b 182 chr2L 4150621 4150656 chr2L 4150705 4150761 24 101 4.0 13.0 8.5 2.5 140 chr2L 4150621 exon CG2955 + chr2L 4150691 exon CG2955 + chr2L 4150761 exon CG2955 + chr2L_24_4150001 chr2L_4150001 RAL-307_100b 183 chr2L 4180102 4180130 chr2L 4180203 4180231 15 100 10.0 13.0 11.5 1.2 129 chr2L 4180102 intergenic not near genes chr2L 4180166 intergenic not near genes chr2L 4180231 intergenic not near genes chr2L_15_4180001 chr2L_4180001 RAL-307_100b 184 chr2L 4181295 4181303 chr2L 4183939 4183960 Burdock 6 2652 16.5 41.0 28.8 0.2 2665 chr2L 4181295 intergenic not near genes chr2L 4182628 intergenic not near genes chr2L 4183960 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-307_100b 185 chr2L 4184447 4184509 chr2L 4184791 4184832 33 339 8.5 10.0 9.2 3.2 385 chr2L 4184447 intergenic not near genes chr2L 4184640 intergenic not near genes chr2L 4184832 intergenic not near genes chr2L_33_4180001 chr2L_4180001 RAL-307_100b 186 chr2L 4231741 4231752 chr2L 4232065 4232076 11 324 39.0 17.0 28.0 0.4 335 chr2L 4231741 intergenic not near genes chr2L 4231908 intergenic not near genes chr2L 4232076 intergenic not near genes chr2L_11_4230001 chr2L_4230001 RAL-307_100b 187 chr2L 4231753 4231785 chr2L 4232062 4232109 31 320 15.5 16.5 16.0 1.8 356 chr2L 4231753 intergenic not near genes chr2L 4231931 intergenic not near genes chr2L 4232109 intergenic not near genes chr2L_31_4230001 chr2L_4230001 RAL-307_100b 188 chr2L 4265470 4265522 chr2L 4265581 4265583 24 108 12.5 20.0 16.2 1.4 113 chr2L 4265470 intergenic not near genes chr2L 4265526 intergenic not near genes chr2L 4265583 intergenic not near genes chr2L_24_4265001 chr2L_4265001 RAL-307_100b 189 chr2L 4351447 4351501 chr2L 4351548 4351614 50 101 14.0 0.5 7.2 6.1 167 chr2L 4351447 5` UTR CR44700 + chr2L 4351530 intergenic CR44700 + chr2L 4351614 intergenic CR44700 + chr2L_50_4350001 chr2L_4350001 RAL-307_100b 190 chr2L 4419579 4419633 chr2L 4419827 4419881 52 245 14.0 14.0 14.0 3.5 302 chr2L 4419579 intron CG15431 - chr2L 4419730 intron CG15431 - chr2L 4419881 intron CG15431 - chr2L_52_4415001 chr2L_4415001 RAL-307_100b 191 chr2L 4535285 4535287 chr2L 4545448 4545450 4 10163 111.5 52.5 82.0 0.0 10165 chr2L 4535285 exon dp - chr2L 4540368 intron dp - chr2L 4545450 exon dp - chr2L_4_4540001 chr2L_4540001 RAL-307_100b 192 chr2L 4601679 4601737 chr2L 4609145 4609203 mdg1 61 7464 17.0 16.5 16.8 3.4 7524 chr2L 4601679 intron dp - chr2L 4605441 intron dp - chr2L 4609203 intron dp - chr2L_61_4605001 chr2L_4605001 RAL-307_100b 193 chr2L 4661818 4661856 chr2L 4669423 4669454 opus 29 7602 15.0 38.5 26.8 1.0 7636 chr2L 4661818 intergenic not near genes chr2L 4665636 intergenic not near genes chr2L 4669454 intergenic not near genes chr2L_29_4665001 chr2L_4665001 RAL-307_100b 194 chr2L 4670098 4670151 chr2L 4670372 4670408 45 269 11.0 14.0 12.5 3.3 310 chr2L 4670098 intergenic not near genes chr2L 4670253 intergenic not near genes chr2L 4670408 intergenic not near genes chr2L_45_4670001 chr2L_4670001 RAL-307_100b 195 chr2L 4819467 4819519 chr2L 4819615 4819667 25 146 11.0 15.0 13.0 1.8 200 chr2L 4819467 intergenic not near genes chr2L 4819567 intergenic not near genes chr2L 4819667 intergenic not near genes chr2L_25_4815001 chr2L_4815001 RAL-307_100b 196 chr2L 4918148 4918157 chr2L 4923246 4923255 jockey 12 5098 32.0 1.5 16.8 0.7 5107 chr2L 4918148 intron hoe1 - chr2L 4920702 intron hoe1 - chr2L 4923255 intron hoe1 - chr2L_12_4920001 chr2L_4920001 RAL-307_100b 197 chr2L 4918158 4918204 chr2L 4923242 4923330 jockey 22 5122 11.5 1.5 6.5 2.9 5172 chr2L 4918158 intron hoe1 - chr2L 4920744 intron hoe1 - chr2L 4923330 intron hoe1 - chr2L_22_4920001 chr2L_4920001 RAL-307_100b 198 chr2L 4923237 4923250 chr2L 4923353 4923365 9 115 0.0 22.0 11.0 0.8 128 chr2L 4923237 intron hoe1 - chr2L 4923301 intron hoe1 - chr2L 4923365 intron hoe1 - chr2L_9_4920001 chr2L_4920001 RAL-307_100b 199 chr2L 4929117 4929151 chr2L 4929227 4929255 32 108 21.0 15.5 18.2 1.7 138 chr2L 4929117 intron hoe1 - chr2L 4929186 intron hoe1 - chr2L 4929255 intron hoe1 - chr2L_32_4925001 chr2L_4925001 RAL-307_100b 200 chr2L 4953487 4953523 chr2L 4953753 4953777 pogo 25 264 22.0 8.0 15.0 1.6 290 chr2L 4953487 intergenic Jon25Bii - chr2L 4953632 intergenic Jon25Bii - chr2L 4953777 intergenic not near genes chr2L_25_4950001 chr2L_4950001 RAL-307_100b 201 chr2L 5025108 5025165 chr2L 5025209 5025266 29 100 10.5 7.5 9.0 2.9 158 chr2L 5025108 intron vkg - chr2L 5025187 intron vkg - chr2L 5025266 intron vkg - chr2L_29_5025001 chr2L_5025001 RAL-307_100b 202 chr2L 5037920 5037952 chr2L 5038036 5038046 15 112 26.0 2.5 14.2 1.0 126 chr2L 5037920 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5037983 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038046 5` UTR,5` UTR CG14042 +,SP555 + chr2L_15_5035001 chr2L_5035001 RAL-307_100b 203 chr2L 5085020 5085068 chr2L 5085137 5085172 15 116 0.0 12.0 6.0 2.1 152 chr2L 5085020 intron pgant5 - chr2L 5085096 intron pgant5 - chr2L 5085172 intron pgant5 - chr2L_15_5085001 chr2L_5085001 RAL-307_100b 204 chr2L 5120949 5121006 chr2L 5121067 5121124 57 113 10.0 5.5 7.8 6.5 175 chr2L 5120949 intron Msp300 + chr2L 5121036 intron Msp300 + chr2L 5121124 intron Msp300 + chr2L_57_5120001 chr2L_5120001 RAL-307_100b 205 chr2L 5147698 5147757 chr2L 5147955 5148004 51 251 13.5 15.5 14.5 3.3 306 chr2L 5147698 intron Msp300 + chr2L 5147851 intron Msp300 + chr2L 5148004 intron Msp300 + chr2L_51_5145001 chr2L_5145001 RAL-307_100b 206 chr2L 5165960 5165969 chr2L 5170071 5170072 4 4110 31.5 72.0 51.8 0.1 4112 chr2L 5165960 intron Msp300 + chr2L 5168016 intron Msp300 + chr2L 5170072 intron Msp300 + chr2L_4_5165001 chr2L_5165001 RAL-307_100b 207 chr2L 5242936 5242937 chr2L 16217660 16217660 4 10974724 91.0 81.5 86.2 0.0 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_4_10730001 chr2L_10730001 RAL-307_100b 208 chr2L 5262505 5262543 chr2L 5262607 5262623 17 95 21.0 18.5 19.8 0.8 118 chr2L 5262505 intron tkv - chr2L 5262564 intron tkv - chr2L 5262623 intron tkv - chr2L_17_5260001 chr2L_5260001 RAL-307_100b 209 chr2L 5265746 5265749 chr2L 5265914 5265917 5 168 28.0 14.5 21.2 0.2 171 chr2L 5265746 intron,exon tkv -,Cyp4ac1 + chr2L 5265832 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265917 intron tkv - chr2L_5_5265001 chr2L_5265001 RAL-307_100b 210 chr2L 5265751 5265797 chr2L 5265907 5265965 50 166 8.5 9.5 9.0 5.0 214 chr2L 5265751 intron,exon tkv -,Cyp4ac1 + chr2L 5265858 intron,3` UTR tkv -,Cyp4ac1 + chr2L 5265965 intron tkv - chr2L_50_5265001 chr2L_5265001 RAL-307_100b 211 chr2L 5342748 5342801 chr2L 5345153 5345160 Doc 37 2403 15.5 16.0 15.8 2.2 2412 chr2L 5342748 intergenic not near genes chr2L 5343954 intergenic not near genes chr2L 5345160 intergenic not near genes chr2L_37_5340001 chr2L_5340001 RAL-307_100b 212 chr2L 5378404 5378451 chr2L 5378508 5378544 39 103 14.5 10.5 12.5 2.9 140 chr2L 5378404 intergenic not near genes chr2L 5378474 intergenic not near genes chr2L 5378544 intergenic not near genes chr2L_39_5375001 chr2L_5375001 RAL-307_100b 213 chr2L 5448011 5448020 chr2L 5448105 5448129 5 106 0.5 5.0 2.8 1.3 118 chr2L 5448011 intergenic not near genes chr2L 5448070 intergenic not near genes chr2L 5448129 intergenic not near genes chr2L_5_5445001 chr2L_5445001 RAL-307_100b 214 chr2L 5449679 5449734 chr2L 5449804 5449816 10 117 0.0 0.0 0.0 10.0 137 chr2L 5449679 intergenic not near genes chr2L 5449748 intergenic not near genes chr2L 5449816 intergenic not near genes chr2L_10_5445001 chr2L_5445001 RAL-307_100b 215 chr2L 5508503 5508521 chr2L 5508605 5508621 4 101 26.5 13.0 19.8 0.2 118 chr2L 5508503 intergenic not near genes chr2L 5508562 intergenic not near genes chr2L 5508621 intergenic not near genes chr2L_4_5505001 chr2L_5505001 RAL-307_100b 216 chr2L 5508523 5508563 chr2L 5508604 5508664 42 99 12.0 12.5 12.2 3.2 141 chr2L 5508523 intergenic not near genes chr2L 5508594 intergenic not near genes chr2L 5508664 intergenic not near genes chr2L_42_5505001 chr2L_5505001 RAL-307_100b 217 chr2L 5509325 5509362 chr2L 5509448 5509485 38 121 9.0 0.5 4.8 6.6 160 chr2L 5509325 intergenic not near genes chr2L 5509405 intergenic not near genes chr2L 5509485 intergenic not near genes chr2L_38_5505001 chr2L_5505001 RAL-307_100b 218 chr2L 5550094 5550136 chr2L 5550192 5550236 21 92 10.0 0.0 5.0 3.5 142 chr2L 5550094 exon CG14014 - chr2L 5550165 exon CG14014 - chr2L 5550236 exon CG14014 - chr2L_21_5550001 chr2L_5550001 RAL-307_100b 219 chr2L 5563660 5563714 chr2L 5563769 5563823 30 108 6.0 10.0 8.0 3.3 163 chr2L 5563660 intergenic GluRIIB + chr2L 5563742 intergenic GluRIIB + chr2L 5563823 intergenic GluRIIB + chr2L_30_5560001 chr2L_5560001 RAL-307_100b 220 chr2L 5592384 5592395 chr2L 5592506 5592518 8 122 0.0 15.0 7.5 0.9 134 chr2L 5592384 intergenic not near genes chr2L 5592451 intergenic not near genes chr2L 5592518 intergenic not near genes chr2L_8_5590001 chr2L_5590001 RAL-307_100b 221 chr2L 5594295 5594343 chr2L 5594412 5594460 37 115 16.5 13.5 15.0 2.3 165 chr2L 5594295 intergenic not near genes chr2L 5594378 intergenic not near genes chr2L 5594460 intergenic not near genes chr2L_37_5590001 chr2L_5590001 RAL-307_100b 222 chr2L 5594345 5594350 chr2L 5594409 5594467 8 100 13.5 12.0 12.8 0.6 122 chr2L 5594345 intergenic not near genes chr2L 5594406 intergenic not near genes chr2L 5594467 intergenic not near genes chr2L_8_5590001 chr2L_5590001 RAL-307_100b 223 chr2L 5646659 5646677 chr2L 5646773 5646776 13 110 35.5 38.5 37.0 0.3 117 chr2L 5646659 intron CG31646 - chr2L 5646718 intron CG31646 - chr2L 5646776 intron CG31646 - chr2L_13_5645001 chr2L_5645001 RAL-307_100b 224 chr2L 5666281 5666324 chr2L 5666384 5666439 17 110 11.0 10.0 10.5 1.5 158 chr2L 5666281 intron Hsp60C + chr2L 5666360 intron Hsp60C + chr2L 5666439 intron Hsp60C + chr2L_17_5665001 chr2L_5665001 RAL-307_100b 225 chr2L 5667631 5667634 chr2L 5667733 5667736 5 102 52.0 19.0 35.5 0.1 105 chr2L 5667631 intron Hsp60C + chr2L 5667684 intron Hsp60C + chr2L 5667736 intron Hsp60C + chr2L_5_5665001 chr2L_5665001 RAL-307_100b 226 chr2L 5667635 5667688 chr2L 5667732 5667769 49 99 16.5 19.5 18.0 2.6 134 chr2L 5667635 intron Hsp60C + chr2L 5667702 intron Hsp60C + chr2L 5667769 intron Hsp60C + chr2L_49_5665001 chr2L_5665001 RAL-307_100b 227 chr2L 5686433 5686444 chr2L 5686540 5686551 15 106 15.0 26.5 20.8 0.7 118 chr2L 5686433 intergenic not near genes chr2L 5686492 intergenic not near genes chr2L 5686551 intergenic not near genes chr2L_15_5685001 chr2L_5685001 RAL-307_100b 228 chr2L 5695837 5695892 chr2L 5695954 5696009 55 114 12.0 13.5 12.8 4.0 172 chr2L 5695837 intergenic not near genes chr2L 5695923 intergenic not near genes chr2L 5696009 intergenic not near genes chr2L_55_5695001 chr2L_5695001 RAL-307_100b 229 chr2L 5749879 5749932 chr2L 5749973 5749987 57 87 20.0 18.5 19.2 2.8 108 chr2L 5749879 intron CG11030 + chr2L 5749933 intron CG11030 + chr2L 5749987 intron CG11030 + chr2L_57_5745001 chr2L_5745001 RAL-307_100b 230 chr2L 5764875 5764927 chr2L 5765009 5765060 8 133 0.0 14.5 7.2 1.0 185 chr2L 5764875 intron obst-E - chr2L 5764968 intron obst-E - chr2L 5765060 intron obst-E - chr2L_8_5760001 chr2L_5760001 RAL-307_100b 231 chr2L 5806229 5806240 chr2L 5806354 5806368 11 128 13.5 24.5 19.0 0.6 139 chr2L 5806229 intron CG11034 + chr2L 5806298 intron CG11034 + chr2L 5806368 intron CG11034 + chr2L_11_5805001 chr2L_5805001 RAL-307_100b 232 chr2L 5827687 5827693 chr2L 5836720 5836726 roo 5 9032 45.5 23.5 34.5 0.1 9039 chr2L 5827687 intron TrissinR + chr2L 5832206 intron TrissinR + chr2L 5836726 intron TrissinR + chr2L_5_5830001 chr2L_5830001 RAL-307_100b 233 chr2L 5827697 5827721 chr2L 5836718 5836754 roo 25 9029 29.0 22.5 25.8 0.9 9057 chr2L 5827697 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836754 intron TrissinR + chr2L_25_5830001 chr2L_5830001 RAL-307_100b 234 chr2L 5827723 5827739 chr2L 5836714 5836731 roo 14 9023 19.5 19.5 19.5 0.7 9008 chr2L 5827723 intron TrissinR + chr2L 5832227 intron TrissinR + chr2L 5836731 intron TrissinR + chr2L_14_5830001 chr2L_5830001 RAL-307_100b 235 chr2L 5839146 5839179 chr2L 5839260 5839293 10 112 22.0 23.0 22.5 0.4 147 chr2L 5839146 intron TrissinR + chr2L 5839220 intron TrissinR + chr2L 5839293 intron TrissinR + chr2L_10_5835001 chr2L_5835001 RAL-307_100b 236 chr2L 5839182 5839196 chr2L 5839251 5839293 40 94 15.0 16.5 15.8 2.4 111 chr2L 5839182 intron TrissinR + chr2L 5839238 intron TrissinR + chr2L 5839293 intron TrissinR + chr2L_40_5835001 chr2L_5835001 RAL-307_100b 237 chr2L 5887579 5887634 chr2L 5887685 5887740 58 103 8.0 22.0 15.0 3.6 161 chr2L 5887579 3` UTR CR44577 - chr2L 5887660 3` UTR CR44577 - chr2L 5887740 3` UTR CR44577 - chr2L_58_5885001 chr2L_5885001 RAL-307_100b 238 chr2L 5897571 5897584 chr2L 5897679 5897692 10 108 38.5 13.5 26.0 0.4 121 chr2L 5897571 intergenic not near genes chr2L 5897632 intergenic not near genes chr2L 5897692 intergenic not near genes chr2L_10_5895001 chr2L_5895001 RAL-307_100b 239 chr2L 5897585 5897628 chr2L 5897678 5897714 55 94 12.0 13.0 12.5 4.1 129 chr2L 5897585 intergenic not near genes chr2L 5897650 intergenic not near genes chr2L 5897714 intergenic not near genes chr2L_55_5895001 chr2L_5895001 RAL-307_100b 240 chr2L 5900235 5900291 chr2L 5900352 5900408 31 112 14.5 22.0 18.2 1.6 173 chr2L 5900235 3` UTR CR44579 - chr2L 5900322 3` UTR CR44579 - chr2L 5900408 intergenic CR44579 - chr2L_31_5900001 chr2L_5900001 RAL-307_100b 241 chr2L 5904436 5904474 chr2L 5904541 5904579 35 103 9.0 1.0 5.0 5.8 143 chr2L 5904436 exon CG9021 - chr2L 5904508 intron CG9021 - chr2L 5904579 intron CG9021 - chr2L_35_5900001 chr2L_5900001 RAL-307_100b 242 chr2L 5926254 5926455 chr2L 5926352 5926553 19 144 0.0 0.0 0.0 19.0 299 chr2L 5926254 intron dsf + chr2L 5926404 intron dsf + chr2L 5926553 intron dsf + chr2L_19_5925001 chr2L_5925001 RAL-307_100b 243 chr2L 5957236 5957252 chr2L 5957287 5957296 6 43 14.0 11.5 12.8 0.4 60 chr2L 5957236 exon Vm26Ab + chr2L 5957266 exon Vm26Ab + chr2L 5957296 exon Vm26Ab + chr2L_6_5955001 chr2L_5955001 RAL-307_100b 244 chr2L 5960648 5960693 chr2L 5960833 5960878 35 184 7.5 0.0 3.8 7.3 230 chr2L 5960648 intergenic Vm26Aa - chr2L 5960763 intergenic Vm26Aa - chr2L 5960878 intergenic not near genes chr2L_35_5960001 chr2L_5960001 RAL-307_100b 245 chr2L 5962244 5962290 chr2L 5962345 5962381 36 100 14.5 12.5 13.5 2.5 137 chr2L 5962244 intergenic not near genes chr2L 5962312 intergenic not near genes chr2L 5962381 intergenic not near genes chr2L_36_5960001 chr2L_5960001 RAL-307_100b 246 chr2L 6007069 6007126 chr2L 6007170 6007179 15 92 5.5 5.0 5.2 2.4 110 chr2L 6007069 intergenic Gal -,CG9098 - chr2L 6007124 intergenic CG9098 -,Gal - chr2L 6007179 intergenic CG9098 -,Gal - chr2L_15_6005001 chr2L_6005001 RAL-307_100b 247 chr2L 6050416 6050468 chr2L 6050545 6050597 63 127 15.5 13.5 14.5 4.1 181 chr2L 6050416 3` UTR CG12393 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050597 intergenic CG12393 +,CG9135 + chr2L_63_6050001 chr2L_6050001 RAL-307_100b 248 chr2L 6116683 6116729 chr2L 6116787 6116806 26 107 22.5 9.0 15.8 1.5 123 chr2L 6116683 intron stai + chr2L 6116744 intron stai + chr2L 6116806 intron stai + chr2L_26_6115001 chr2L_6115001 RAL-307_100b 249 chr2L 6137746 6137775 chr2L 6137860 6137887 7 114 0.5 0.0 0.2 5.8 141 chr2L 6137746 intergenic not near genes chr2L 6137816 intergenic not near genes chr2L 6137887 intergenic not near genes chr2L_7_6135001 chr2L_6135001 RAL-307_100b 250 chr2L 6185415 6185473 chr2L 6185518 6185575 59 95 19.0 20.0 19.5 2.9 160 chr2L 6185415 intron CG34380 + chr2L 6185495 intron CG34380 + chr2L 6185575 intron CG34380 + chr2L_59_6185001 chr2L_6185001 RAL-307_100b 251 chr2L 6253594 6253635 chr2L 6253695 6253736 23 98 18.5 9.0 13.8 1.6 142 chr2L 6253594 intron Ddr + chr2L 6253665 intron Ddr + chr2L 6253736 intron Ddr + chr2L_23_6250001 chr2L_6250001 RAL-307_100b 252 chr2L 6255295 6255297 chr2L 6255397 6255399 4 102 43.0 18.0 30.5 0.1 104 chr2L 6255295 intron Ddr + chr2L 6255347 intron Ddr + chr2L 6255399 intron Ddr + chr2L_4_6255001 chr2L_6255001 RAL-307_100b 253 chr2L 6255298 6255334 chr2L 6255394 6255436 37 100 20.5 17.5 19.0 1.9 138 chr2L 6255298 intron Ddr + chr2L 6255367 intron Ddr + chr2L 6255436 intron Ddr + chr2L_37_6255001 chr2L_6255001 RAL-307_100b 254 chr2L 6255335 6255347 chr2L 6255393 6255449 21 93 15.0 17.5 16.2 1.2 114 chr2L 6255335 intron Ddr + chr2L 6255392 intron Ddr + chr2L 6255449 intron Ddr + chr2L_21_6255001 chr2L_6255001 RAL-307_100b 255 chr2L 6283920 6283946 chr2L 6284055 6284065 19 134 16.0 1.0 8.5 2.0 145 chr2L 6283920 intron Ddr + chr2L 6283992 intron Ddr + chr2L 6284065 intron Ddr + chr2L_19_6280001 chr2L_6280001 RAL-307_100b 256 chr2L 6312355 6312364 chr2L 6312447 6312466 10 100 0.0 17.0 8.5 1.1 111 chr2L 6312355 intron Ddr + chr2L 6312410 intron Ddr + chr2L 6312466 intron Ddr + chr2L_10_6310001 chr2L_6310001 RAL-307_100b 257 chr2L 6349052 6349075 chr2L 6349155 6349178 20 102 12.0 13.0 12.5 1.5 126 chr2L 6349052 intergenic CG9498 - chr2L 6349115 intergenic CG9498 - chr2L 6349178 intergenic CG9498 - chr2L_20_6345001 chr2L_6345001 RAL-307_100b 258 chr2L 6357777 6357813 chr2L 6357884 6357902 11 97 32.5 10.5 21.5 0.5 125 chr2L 6357777 exon CG9500 - chr2L 6357840 exon CG9500 - chr2L 6357902 exon CG9500 - chr2L_11_6355001 chr2L_6355001 RAL-307_100b 259 chr2L 6357814 6357832 chr2L 6357881 6357922 26 89 11.0 9.0 10.0 2.4 108 chr2L 6357814 exon CG9500 - chr2L 6357868 exon CG9500 - chr2L 6357922 exon CG9500 - chr2L_26_6355001 chr2L_6355001 RAL-307_100b 260 chr2L 6363130 6363155 chr2L 6366071 6366102 Burdock 27 2945 28.0 19.5 23.8 1.1 2972 chr2L 6363130 intergenic not near genes chr2L 6364616 intergenic not near genes chr2L 6366102 intergenic not near genes chr2L_27_6360001 chr2L_6360001 RAL-307_100b 261 chr2L 6363158 6363183 chr2L 6366070 6366112 Burdock 23 2938 13.0 19.0 16.0 1.4 2954 chr2L 6363158 intergenic not near genes chr2L 6364635 intergenic not near genes chr2L 6366112 intergenic not near genes chr2L_23_6360001 chr2L_6360001 RAL-307_100b 262 chr2L 6426835 6426866 chr2L 6445117 6445151 roo 33 18283 29.0 25.0 27.0 1.2 18316 chr2L 6426835 3` UTR CG9527 - chr2L 6435993 intron CG9527 - chr2L 6445151 exon CG9527 - chr2L_33_6435001 chr2L_6435001 RAL-307_100b 263 chr2L 6426867 6426889 chr2L 6445116 6445120 roo 27 18277 15.0 24.5 19.8 1.3 18253 chr2L 6426867 3` UTR CG9527 - chr2L 6435994 intron CG9527 - chr2L 6445120 exon CG9527 - chr2L_27_6435001 chr2L_6435001 RAL-307_100b 264 chr2L 6463534 6463583 chr2L 6463645 6463700 45 105 22.5 12.5 17.5 2.4 166 chr2L 6463534 exon CG16947 - chr2L 6463617 exon CG16947 - chr2L 6463700 exon CG16947 - chr2L_45_6460001 chr2L_6460001 RAL-307_100b 265 chr2L 6590076 6590125 chr2L 6590173 6590223 25 97 13.5 15.0 14.2 1.6 147 chr2L 6590076 intron CG11319 - chr2L 6590150 intron CG11319 - chr2L 6590223 intron CG11319 - chr2L_25_6590001 chr2L_6590001 RAL-307_100b 266 chr2L 6772574 6772581 chr2L 6772667 6772689 5 105 26.0 22.0 24.0 0.2 115 chr2L 6772574 5` UTR CG11321 - chr2L 6772632 5` UTR CG11321 - chr2L 6772689 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-307_100b 267 chr2L 6772588 6772597 chr2L 6772666 6772690 12 95 21.0 21.5 21.2 0.5 102 chr2L 6772588 5` UTR CG11321 - chr2L 6772639 5` UTR CG11321 - chr2L 6772690 5` UTR CG11321 - chr2L_12_6770001 chr2L_6770001 RAL-307_100b 268 chr2L 6799512 6799570 chr2L 6799625 6799678 40 111 8.5 8.0 8.2 4.3 166 chr2L 6799512 5` UTR CR43610 + chr2L 6799595 5` UTR CR43610 + chr2L 6799678 intergenic CR43610 +,CG17376 - chr2L_40_6795001 chr2L_6795001 RAL-307_100b 269 chr2L 6818104 6818142 chr2L 6818218 6818254 9 113 6.0 15.5 10.8 0.8 150 chr2L 6818104 intergenic not near genes chr2L 6818179 intergenic not near genes chr2L 6818254 intergenic not near genes chr2L_9_6815001 chr2L_6815001 RAL-307_100b 270 chr2L 6876775 6876809 chr2L 6882964 6883018 diver 18 6203 18.5 7.5 13.0 1.3 6243 chr2L 6876775 intron Nlg2 + chr2L 6879896 intron Nlg2 + chr2L 6883018 intron Nlg2 + chr2L_18_6875001 chr2L_6875001 RAL-307_100b 271 chr2L 6969252 6969286 chr2L 6969357 6969391 26 103 25.5 10.0 17.8 1.4 139 chr2L 6969252 3` UTR snRNP-U1-70K - chr2L 6969322 3` UTR snRNP-U1-70K - chr2L 6969391 3` UTR snRNP-U1-70K - chr2L_26_6965001 chr2L_6965001 RAL-307_100b 272 chr2L 6969287 6969538 chr2L 6969356 6969655 24 106 65.0 10.0 37.5 0.6 368 chr2L 6969287 3` UTR snRNP-U1-70K - chr2L 6969471 3` UTR snRNP-U1-70K - chr2L 6969655 3` UTR snRNP-U1-70K - chr2L_24_6965001 chr2L_6965001 RAL-307_100b 273 chr2L 6973278 6973337 chr2L 6973427 6973486 63 144 8.0 15.5 11.8 4.9 208 chr2L 6973278 3` UTR uif - chr2L 6973382 3` UTR uif - chr2L 6973486 exon uif - chr2L_63_6970001 chr2L_6970001 RAL-307_100b 274 chr2L 6991393 6991435 chr2L 6998552 6998583 HMS-Beagle 7 7153 0.0 11.0 5.5 1.1 7190 chr2L 6991393 intron uif - chr2L 6994988 intron uif - chr2L 6998583 intron uif - chr2L_7_6990001 chr2L_6990001 RAL-307_100b 275 chr2L 7042037 7042087 chr2L 7042151 7042201 42 112 10.5 13.0 11.8 3.3 164 chr2L 7042037 intron milt + chr2L 7042119 intron milt + chr2L 7042201 intron milt + chr2L_42_7040001 chr2L_7040001 RAL-307_100b 276 chr2L 7081683 7081715 chr2L 7081788 7081821 28 105 21.0 11.0 16.0 1.6 138 chr2L 7081683 intron Pvf2 - chr2L 7081752 intron Pvf2 - chr2L 7081821 intron Pvf2 - chr2L_28_7080001 chr2L_7080001 RAL-307_100b 277 chr2L 7082873 7082892 chr2L 7082985 7082991 11 111 23.5 30.5 27.0 0.4 118 chr2L 7082873 intron Pvf2 - chr2L 7082932 intron Pvf2 - chr2L 7082991 intron Pvf2 - chr2L_11_7080001 chr2L_7080001 RAL-307_100b 278 chr2L 7089858 7089862 chr2L 7089992 7090000 6 136 38.0 26.0 32.0 0.2 142 chr2L 7089858 intergenic not near genes chr2L 7089929 intergenic not near genes chr2L 7090000 intergenic not near genes chr2L_6_7085001 chr2L_7085001 RAL-307_100b 279 chr2L 7089863 7089866 chr2L 7089988 7090000 4 129 35.5 23.0 29.2 0.1 137 chr2L 7089863 intergenic not near genes chr2L 7089932 intergenic not near genes chr2L 7090000 intergenic not near genes chr2L_4_7085001 chr2L_7085001 RAL-307_100b 280 chr2L 7089867 7089907 chr2L 7089985 7090005 39 130 12.5 23.0 17.8 2.1 138 chr2L 7089867 intergenic not near genes chr2L 7089936 intergenic not near genes chr2L 7090005 intergenic not near genes chr2L_39_7085001 chr2L_7085001 RAL-307_100b 281 chr2L 7114974 7115032 chr2L 7115133 7115186 34 153 0.0 12.5 6.2 4.7 212 chr2L 7114974 intron Pvf3 - chr2L 7115080 intron Pvf3 - chr2L 7115186 intron Pvf3 - chr2L_34_7115001 chr2L_7115001 RAL-307_100b 282 chr2L 7197970 7198022 chr2L 7198074 7198080 39 101 11.5 18.5 15.0 2.4 110 chr2L 7197970 intron CG4502 - chr2L 7198025 intron CG4502 - chr2L 7198080 intron CG4502 - chr2L_39_7195001 chr2L_7195001 RAL-307_100b 283 chr2L 7244697 7244756 chr2L 7244847 7244905 40 147 9.5 17.0 13.2 2.8 208 chr2L 7244697 intron Ndae1 - chr2L 7244801 intron Ndae1 - chr2L 7244905 intron Ndae1 - chr2L_40_7240001 chr2L_7240001 RAL-307_100b 284 chr2L 7295973 7296023 chr2L 7296136 7296186 22 160 13.5 9.5 11.5 1.8 213 chr2L 7295973 intergenic not near genes chr2L 7296080 intergenic not near genes chr2L 7296186 intergenic not near genes chr2L_22_7295001 chr2L_7295001 RAL-307_100b 285 chr2L 7343302 7343310 chr2L 7350443 7350451 roo 7 7141 37.0 26.0 31.5 0.2 7149 chr2L 7343302 intron Wnt6 + chr2L 7346876 intron Wnt6 + chr2L 7350451 intron Wnt6 + chr2L_7_7345001 chr2L_7345001 RAL-307_100b 286 chr2L 7343311 7343357 chr2L 7350442 7350496 roo 53 7134 13.5 23.0 18.2 2.8 7185 chr2L 7343311 intron Wnt6 + chr2L 7346904 intron Wnt6 + chr2L 7350496 intron Wnt6 + chr2L_53_7345001 chr2L_7345001 RAL-307_100b 287 chr2L 7357494 7357557 chr2L 7357597 7357659 18 97 1.0 8.5 4.8 3.1 165 chr2L 7357494 intergenic not near genes chr2L 7357576 intergenic not near genes chr2L 7357659 intergenic not near genes chr2L_18_7355001 chr2L_7355001 RAL-307_100b 288 chr2L 7399284 7399334 chr2L 7399682 7399732 40 395 1.0 18.0 9.5 3.8 448 chr2L 7399284 intergenic not near genes chr2L 7399508 intergenic not near genes chr2L 7399732 intergenic not near genes chr2L_40_7395001 chr2L_7395001 RAL-307_100b 289 chr2L 7410671 7410675 chr2L 7410786 7410795 6 118 0.0 37.0 18.5 0.3 124 chr2L 7410671 intergenic CG15818 + chr2L 7410733 intergenic CG15818 + chr2L 7410795 intergenic CG15818 + chr2L_6_7410001 chr2L_7410001 RAL-307_100b 290 chr2L 7436185 7436199 chr2L 7436298 7436308 14 115 25.5 16.0 20.8 0.6 123 chr2L 7436185 intergenic not near genes chr2L 7436246 intergenic not near genes chr2L 7436308 intergenic not near genes chr2L_14_7435001 chr2L_7435001 RAL-307_100b 291 chr2L 7436200 7436221 chr2L 7436296 7436328 22 112 15.0 15.5 15.2 1.4 128 chr2L 7436200 intergenic not near genes chr2L 7436264 intergenic not near genes chr2L 7436328 intergenic not near genes chr2L_22_7435001 chr2L_7435001 RAL-307_100b 292 chr2L 7439446 7439447 chr2L 7439550 7439551 4 104 5.5 23.0 14.2 0.3 105 chr2L 7439446 intron CG5973 + chr2L 7439498 intron CG5973 + chr2L 7439551 intron CG5973 + chr2L_4_7435001 chr2L_7435001 RAL-307_100b 293 chr2L 7439448 7439450 chr2L 7439542 7439554 5 102 1.5 20.5 11.0 0.4 106 chr2L 7439448 intron CG5973 + chr2L 7439501 intron CG5973 + chr2L 7439554 intron CG5973 + chr2L_5_7435001 chr2L_7435001 RAL-307_100b 294 chr2L 7439914 7439925 chr2L 7440311 7440322 10 396 40.0 9.5 24.8 0.4 408 chr2L 7439914 intron CG5973 + chr2L 7440118 intron CG5973 + chr2L 7440322 intron CG5973 + chr2L_10_7440001 chr2L_7440001 RAL-307_100b 295 chr2L 7439927 7439962 chr2L 7440309 7440348 31 391 16.5 9.0 12.8 2.2 421 chr2L 7439927 intron CG5973 + chr2L 7440138 intron CG5973 + chr2L 7440348 intron CG5973 + chr2L_31_7440001 chr2L_7440001 RAL-307_100b 296 chr2L 7459168 7459219 chr2L 7459354 7459405 12 181 14.5 1.0 7.8 1.4 237 chr2L 7459168 intron Gr28b - chr2L 7459286 intron Gr28b - chr2L 7459405 intron Gr28b - chr2L_12_7455001 chr2L_7455001 RAL-307_100b 297 chr2L 5339195 5339198 chr2L 7459374 7459377 4 2120179 61.5 1.0 31.2 0.1 2120182 chr2L 5339195 3` UTR CG12512 - chr2L 6399286 intron CG42368 - chr2L 7459377 intron Gr28b - chr2L_4_6395001 chr2L_6395001 RAL-307_100b 298 chr2L 7461018 7461080 chr2L 7461298 7461341 74 277 14.0 14.0 14.0 4.9 323 chr2L 7461018 intron Gr28b - chr2L 7461180 intron Gr28b - chr2L 7461341 intron Gr28b - chr2L_74_7460001 chr2L_7460001 RAL-307_100b 299 chr2L 7489585 7489605 chr2L 7489716 7489736 19 131 6.0 0.5 3.2 4.5 151 chr2L 7489585 intron Ziz - chr2L 7489660 intron Ziz - chr2L 7489736 intron Ziz - chr2L_19_7485001 chr2L_7485001 RAL-307_100b 300 chr2L 7493387 7493420 chr2L 7493498 7493531 17 109 0.0 13.0 6.5 2.3 144 chr2L 7493387 intron Ziz - chr2L 7493459 intron Ziz - chr2L 7493531 intron Ziz - chr2L_17_7490001 chr2L_7490001 RAL-307_100b 301 chr2L 7502711 7502770 chr2L 7502812 7502841 59 95 20.0 19.5 19.8 2.8 130 chr2L 7502711 intron RapGAP1 - chr2L 7502776 intron RapGAP1 - chr2L 7502841 intron RapGAP1 - chr2L_59_7500001 chr2L_7500001 RAL-307_100b 302 chr2L 7555191 7555234 chr2L 7555293 7555336 34 99 0.0 13.0 6.5 4.5 145 chr2L 7555191 intron RapGAP1 - chr2L 7555264 intron RapGAP1 - chr2L 7555336 intron RapGAP1 - chr2L_34_7555001 chr2L_7555001 RAL-307_100b 303 chr2L 7579167 7579186 chr2L 7579382 7579401 BS 5 215 9.0 0.5 4.8 0.9 234 chr2L 7579167 intergenic RapGAP1 - chr2L 7579284 intergenic RapGAP1 - chr2L 7579401 intergenic RapGAP1 - chr2L_5_7575001 chr2L_7575001 RAL-307_100b 304 chr2L 7579863 7579919 chr2L 7579970 7580022 57 105 12.0 16.0 14.0 3.8 159 chr2L 7579863 intergenic not near genes chr2L 7579942 intergenic not near genes chr2L 7580022 intergenic not near genes chr2L_57_7575001 chr2L_7575001 RAL-307_100b 305 chr2L 7585481 7585495 chr2L 7585605 7585619 14 123 22.5 9.5 16.0 0.8 138 chr2L 7585481 intergenic not near genes chr2L 7585550 intergenic not near genes chr2L 7585619 intergenic not near genes chr2L_14_7585001 chr2L_7585001 RAL-307_100b 306 chr2L 7625167 7625192 chr2L 7625290 7625315 15 121 14.0 25.0 19.5 0.7 148 chr2L 7625167 intergenic not near genes chr2L 7625241 intergenic not near genes chr2L 7625315 intergenic not near genes chr2L_15_7625001 chr2L_7625001 RAL-307_100b 307 chr2L 7633436 7633440 chr2L 7633545 7633561 4 117 11.5 0.0 5.8 0.6 125 chr2L 7633436 intergenic not near genes chr2L 7633498 intergenic not near genes chr2L 7633561 intergenic not near genes chr2L_4_7630001 chr2L_7630001 RAL-307_100b 308 chr2L 7636348 7636364 chr2L 7636477 7636493 15 128 20.0 21.0 20.5 0.7 145 chr2L 7636348 5` UTR CR44799 + chr2L 7636420 intron CR44799 + chr2L 7636493 5` UTR CR44799 + chr2L_15_7635001 chr2L_7635001 RAL-307_100b 309 chr2L 7636365 7636376 chr2L 7636474 7636504 15 124 12.5 19.5 16.0 0.9 139 chr2L 7636365 intron CR44799 + chr2L 7636434 intron CR44799 + chr2L 7636504 5` UTR CR44799 + chr2L_15_7635001 chr2L_7635001 RAL-307_100b 310 chr2L 7640406 7640422 chr2L 7640513 7640533 18 109 14.5 13.5 14.0 1.2 127 chr2L 7640406 intergenic not near genes chr2L 7640470 intergenic not near genes chr2L 7640533 intergenic not near genes chr2L_18_7640001 chr2L_7640001 RAL-307_100b 311 chr2L 7650001 7650024 chr2L 7650102 7650125 17 99 21.5 0.0 10.8 1.4 124 chr2L 7650001 intron Slob - chr2L 7650063 intron Slob - chr2L 7650125 intron Slob - chr2L_17_7650001 chr2L_7650001 RAL-307_100b 312 chr2L 7743503 7743504 chr2L 12665680 12665686 4 4922179 20.5 23.0 21.8 0.2 4922183 chr2L 7743503 intergenic CG7214 - chr2L 10204594 intergenic CG5734 -,CG34159 - chr2L 12665686 intron pdm2 + chr2L_4_10200001 chr2L_10200001 RAL-307_100b 313 chr2L 7769740 7769800 chr2L 7769925 7769985 27 182 5.5 7.5 6.5 3.6 245 chr2L 7769740 intron CG7191 + chr2L 7769862 intron CG7191 + chr2L 7769985 intron CG7191 + chr2L_27_7765001 chr2L_7765001 RAL-307_100b 314 chr2L 7770586 7770589 chr2L 7770731 7770734 4 146 11.0 2.5 6.8 0.5 148 chr2L 7770586 intron CG7191 + chr2L 7770660 intron CG7191 + chr2L 7770734 intron CG7191 + chr2L_4_7770001 chr2L_7770001 RAL-307_100b 315 chr2L 7796250 7796285 chr2L 7796355 7796392 10 111 10.0 0.0 5.0 1.7 142 chr2L 7796250 5` UTR CR44825 + chr2L 7796321 3` UTR Herp - chr2L 7796392 3` UTR Herp - chr2L_10_7795001 chr2L_7795001 RAL-307_100b 316 chr2L 7859562 7859563 chr2L 7859698 7859705 4 140 42.5 20.0 31.2 0.1 143 chr2L 7859562 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859634 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859705 3` UTR,intron lectin-28C +,TwdlE - chr2L_4_7855001 chr2L_7855001 RAL-307_100b 317 chr2L 7859565 7859614 chr2L 7859695 7859710 54 132 12.5 18.0 15.2 3.3 145 chr2L 7859565 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859638 3` UTR,intron lectin-28C +,TwdlE - chr2L 7859710 3` UTR,intron lectin-28C +,TwdlE - chr2L_54_7855001 chr2L_7855001 RAL-307_100b 318 chr2L 7922716 7922775 chr2L 7922822 7922839 59 103 14.0 15.5 14.8 3.7 123 chr2L 7922716 intron Snoo - chr2L 7922778 intron Snoo - chr2L 7922839 intron Snoo - chr2L_59_7920001 chr2L_7920001 RAL-307_100b 319 chr2L 7941179 7941196 chr2L 7941278 7941300 17 102 22.5 25.0 23.8 0.7 121 chr2L 7941179 intron Snoo - chr2L 7941240 intron Snoo - chr2L 7941300 intron Snoo - chr2L_17_7940001 chr2L_7940001 RAL-307_100b 320 chr2L 7952704 7952721 chr2L 7952866 7952883 12 161 0.5 3.0 1.8 4.3 179 chr2L 7952704 intron Snoo - chr2L 7952794 intron Snoo - chr2L 7952883 intron Snoo - chr2L_12_7950001 chr2L_7950001 RAL-307_100b 321 chr2L 7959016 7959071 chr2L 7960452 7960507 pogo 55 1432 12.0 15.0 13.5 3.8 1491 chr2L 7959016 intron Snoo - chr2L 7959762 intron Snoo - chr2L 7960507 intron Snoo - chr2L_55_7955001 chr2L_7955001 RAL-307_100b 322 chr2L 7977066 7977113 chr2L 7984067 7984109 297 25 6995 8.0 16.0 12.0 1.9 7043 chr2L 7977066 intron Snoo - chr2L 7980588 intron Snoo - chr2L 7984109 intron,5` UTR Snoo -,CG7231 + chr2L_25_7980001 chr2L_7980001 RAL-307_100b 323 chr2L 7997015 7997065 chr2L 7997134 7997165 34 121 1.0 3.0 2.0 11.3 150 chr2L 7997015 intron CG7227 - chr2L 7997090 intron CG7227 - chr2L 7997165 intron CG7227 - chr2L_34_7995001 chr2L_7995001 RAL-307_100b 324 chr2L 8013593 8013608 chr2L 8018822 8018837 copia 9 5228 27.0 0.0 13.5 0.6 5244 chr2L 8013593 intron Tg + chr2L 8016215 intron Tg + chr2L 8018837 intron Tg + chr2L_9_8015001 chr2L_8015001 RAL-307_100b 325 chr2L 8013644 8013647 chr2L 8023604 8023607 copia 4 9960 9.0 20.0 14.5 0.3 9963 chr2L 8013644 intron Tg + chr2L 8018626 intron Tg + chr2L 8023607 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-307_100b 326 chr2L 8018818 8018836 chr2L 8023627 8023645 Doc 14 4808 0.0 28.5 14.2 0.9 4827 chr2L 8018818 intron Tg + chr2L 8021232 intron Tg + chr2L 8023645 intron Tg + chr2L_14_8020001 chr2L_8020001 RAL-307_100b 327 chr2L 8032612 8032624 chr2L 8032725 8032738 11 113 21.0 1.5 11.2 0.9 126 chr2L 8032612 intron,exon CG7367 -,Cka + chr2L 8032675 intron,intron CG7367 -,Cka + chr2L 8032738 intron,intron CG7367 -,Cka + chr2L_11_8030001 chr2L_8030001 RAL-307_100b 328 chr2L 8165105 8165140 chr2L 8165199 8165236 21 104 0.5 15.0 7.8 2.4 131 chr2L 8165105 intron Piezo + chr2L 8165170 intron Piezo + chr2L 8165236 intron Piezo + chr2L_21_8165001 chr2L_8165001 RAL-307_100b 329 chr2L 8167121 8167141 chr2L 8167237 8167257 15 113 26.5 16.0 21.2 0.7 136 chr2L 8167121 intron Piezo + chr2L 8167189 intron Piezo + chr2L 8167257 intron Piezo + chr2L_15_8165001 chr2L_8165001 RAL-307_100b 330 chr2L 8167142 8167177 chr2L 8167234 8167258 32 111 13.5 14.0 13.8 2.2 116 chr2L 8167142 intron Piezo + chr2L 8167200 intron Piezo + chr2L 8167258 intron Piezo + chr2L_32_8165001 chr2L_8165001 RAL-307_100b 331 chr2L 8230294 8230347 chr2L 8230403 8230452 25 107 11.0 10.0 10.5 2.2 158 chr2L 8230294 5` UTR Pvr - chr2L 8230373 intron Pvr - chr2L 8230452 intron Pvr - chr2L_25_8230001 chr2L_8230001 RAL-307_100b 332 chr2L 8244706 8244749 chr2L 8244853 8244896 51 145 8.0 17.0 12.5 3.8 190 chr2L 8244706 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244896 intron CG8086 - chr2L_51_8240001 chr2L_8240001 RAL-307_100b 333 chr2L 8266177 8266231 chr2L 8266336 8266370 24 156 8.5 12.5 10.5 2.1 193 chr2L 8266177 intron Btk29A - chr2L 8266274 intron Btk29A - chr2L 8266370 intron Btk29A - chr2L_24_8265001 chr2L_8265001 RAL-307_100b 334 chr2L 8271618 8271750 chr2L 8271718 8271859 40 108 4.5 4.0 4.2 7.7 241 chr2L 8271618 intron Btk29A - chr2L 8271738 intron Btk29A - chr2L 8271859 intron Btk29A - chr2L_40_8270001 chr2L_8270001 RAL-307_100b 335 chr2L 8336929 8336966 chr2L 8337028 8337061 30 100 1.0 17.0 9.0 3.0 132 chr2L 8336929 intergenic not near genes chr2L 8336995 intergenic not near genes chr2L 8337061 intergenic not near genes chr2L_30_8335001 chr2L_8335001 RAL-307_100b 336 chr2L 8350933 8350960 chr2L 8351193 8351207 4 254 0.0 0.0 0.0 4.0 274 chr2L 8350933 3` UTR CG7778 + chr2L 8351070 3` UTR CG7778 + chr2L 8351207 intergenic CG7778 + chr2L_4_8350001 chr2L_8350001 RAL-307_100b 337 chr2L 8430617 8430624 chr2L 8430745 8430752 7 128 45.5 11.5 28.5 0.2 135 chr2L 8430617 3` UTR Akap200 + chr2L 8430684 3` UTR Akap200 + chr2L 8430752 3` UTR Akap200 + chr2L_7_8430001 chr2L_8430001 RAL-307_100b 338 chr2L 8430625 8430676 chr2L 8430744 8430788 36 119 12.0 11.5 11.8 2.8 163 chr2L 8430625 3` UTR Akap200 + chr2L 8430706 3` UTR Akap200 + chr2L 8430788 3` UTR Akap200 + chr2L_36_8430001 chr2L_8430001 RAL-307_100b 339 chr2L 8452398 8452454 chr2L 8461593 8461613 roo 61 9193 20.0 17.5 18.8 3.1 9215 chr2L 8452398 intron fu12 - chr2L 8457006 intron fu12 - chr2L 8461613 intron fu12 - chr2L_61_8455001 chr2L_8455001 RAL-307_100b 340 chr2L 8461815 8461877 chr2L 8461921 8461983 32 105 9.0 13.0 11.0 2.7 168 chr2L 8461815 intron fu12 - chr2L 8461899 intron fu12 - chr2L 8461983 intron fu12 - chr2L_32_8460001 chr2L_8460001 RAL-307_100b 341 chr2L 8493944 8493948 chr2L 8494055 8494059 7 111 14.0 28.5 21.2 0.3 115 chr2L 8493944 intron Dh31 - chr2L 8494002 intron Dh31 - chr2L 8494059 intron Dh31 - chr2L_7_8490001 chr2L_8490001 RAL-307_100b 342 chr2L 8502635 8502691 chr2L 8502744 8502801 31 107 10.0 10.5 10.2 2.8 166 chr2L 8502635 intron Dh31 - chr2L 8502718 intron Dh31 - chr2L 8502801 intron Dh31 - chr2L_31_8500001 chr2L_8500001 RAL-307_100b 343 chr2L 8553444 8553493 chr2L 8553616 8553655 34 167 13.0 14.5 13.8 2.3 211 chr2L 8553444 intron Sema-1a + chr2L 8553550 intron Sema-1a + chr2L 8553655 intron Sema-1a + chr2L_34_8550001 chr2L_8550001 RAL-307_100b 344 chr2L 8594442 8594492 chr2L 8601521 8601558 297 24 7078 13.5 13.0 13.2 1.7 7116 chr2L 8594442 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598000 intron Sema-1a + chr2L 8601558 intron Sema-1a + chr2L_24_8595001 chr2L_8595001 RAL-307_100b 345 chr2L 8607534 8607557 chr2L 8607659 8607681 18 124 13.0 28.5 20.8 0.8 147 chr2L 8607534 intron Sema-1a + chr2L 8607608 intron Sema-1a + chr2L 8607681 intron Sema-1a + chr2L_18_8605001 chr2L_8605001 RAL-307_100b 346 chr2L 8612840 8612846 chr2L 8612937 8612937 11 100 0.0 27.0 13.5 0.8 97 chr2L 8612840 intron Sema-1a + chr2L 8612888 intron Sema-1a + chr2L 8612937 intron Sema-1a + chr2L_11_8610001 chr2L_8610001 RAL-307_100b 347 chr2L 8612847 8612870 chr2L 8612934 8612972 30 99 0.0 24.5 12.2 2.3 125 chr2L 8612847 intron Sema-1a + chr2L 8612910 intron Sema-1a + chr2L 8612972 intron Sema-1a + chr2L_30_8610001 chr2L_8610001 RAL-307_100b 348 chr2L 8654210 8654224 chr2L 8654339 8654353 5 125 23.0 22.0 22.5 0.2 143 chr2L 8654210 intron Sema-1a + chr2L 8654282 intron Sema-1a + chr2L 8654353 intron Sema-1a + chr2L_5_8650001 chr2L_8650001 RAL-307_100b 349 chr2L 8654226 8654228 chr2L 8654338 8654352 5 121 21.0 22.0 21.5 0.2 126 chr2L 8654226 intron Sema-1a + chr2L 8654289 intron Sema-1a + chr2L 8654352 intron Sema-1a + chr2L_5_8650001 chr2L_8650001 RAL-307_100b 350 chr2L 8654232 8654244 chr2L 8654336 8654357 18 115 14.0 21.5 17.8 1.0 125 chr2L 8654232 intron Sema-1a + chr2L 8654294 intron Sema-1a + chr2L 8654357 intron Sema-1a + chr2L_18_8650001 chr2L_8650001 RAL-307_100b 351 chr2L 8687057 8687091 chr2L 8687186 8687220 11 129 14.0 9.0 11.5 0.9 163 chr2L 8687057 intergenic Trs23 +,Hnf4 - chr2L 8687138 intergenic Trs23 +,Hnf4 - chr2L 8687220 intergenic Hnf4 -,Trs23 + chr2L_11_8685001 chr2L_8685001 RAL-307_100b 352 chr2L 8701514 8701571 chr2L 8701616 8701673 53 101 18.5 11.0 14.8 3.4 159 chr2L 8701514 intron Hnf4 - chr2L 8701594 intron Hnf4 - chr2L 8701673 intron Hnf4 - chr2L_53_8700001 chr2L_8700001 RAL-307_100b 353 chr2L 8704851 8704912 chr2L 8705096 8705157 58 240 8.5 12.0 10.2 5.2 306 chr2L 8704851 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705004 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705157 intron,5` UTR Hnf4 -,CR44992 + chr2L_58_8705001 chr2L_8705001 RAL-307_100b 354 chr2L 8723092 8723126 chr2L 8731492 8731528 Tirant 37 8401 20.5 15.0 17.8 2.0 8436 chr2L 8723092 intron raw - chr2L 8727310 intron raw - chr2L 8731528 intron raw - chr2L_37_8725001 chr2L_8725001 RAL-307_100b 355 chr2L 8723128 8723144 chr2L 8731490 8731512 Tirant 21 8396 13.5 14.5 14.0 1.4 8384 chr2L 8723128 intron raw - chr2L 8727320 intron raw - chr2L 8731512 intron raw - chr2L_21_8725001 chr2L_8725001 RAL-307_100b 356 chr2L 8772808 8772820 chr2L 8772892 8772934 8 110 0.5 0.0 0.2 6.7 126 chr2L 8772808 intergenic CG9466 -,CG9465 - chr2L 8772871 intergenic CG9466 - chr2L 8772934 intergenic CG9466 - chr2L_8_8770001 chr2L_8770001 RAL-307_100b 357 chr2L 8783941 8783999 chr2L 8784042 8784100 50 98 20.5 18.0 19.2 2.5 159 chr2L 8783941 intergenic not near genes chr2L 8784020 intergenic not near genes chr2L 8784100 intergenic not near genes chr2L_50_8780001 chr2L_8780001 RAL-307_100b 358 chr2L 8784678 8784726 chr2L 8784814 8784862 34 134 12.5 10.5 11.5 2.7 184 chr2L 8784678 intergenic not near genes chr2L 8784770 intergenic not near genes chr2L 8784862 intergenic not near genes chr2L_34_8780001 chr2L_8780001 RAL-307_100b 359 chr2L 8799776 8799832 chr2L 8799917 8799973 47 132 16.5 20.5 18.5 2.4 197 chr2L 8799776 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799973 intergenic not near genes chr2L_47_8795001 chr2L_8795001 RAL-307_100b 360 chr2L 8976197 8976256 chr2L 8976314 8976373 42 111 0.5 14.5 7.5 4.9 176 chr2L 8976197 intergenic not near genes chr2L 8976285 intergenic not near genes chr2L 8976373 intergenic not near genes chr2L_42_8975001 chr2L_8975001 RAL-307_100b 361 chr2L 9000252 9000306 chr2L 9007787 9007841 roo 37 7531 20.5 11.0 15.8 2.2 7589 chr2L 9000252 intergenic Try29F + chr2L 9004046 intergenic not near genes chr2L 9007841 intergenic not near genes chr2L_37_9000001 chr2L_9000001 RAL-307_100b 362 chr2L 9027959 9027978 chr2L 9028068 9028075 10 108 9.5 0.0 4.8 1.7 116 chr2L 9027959 intron,intron CG9582 -,CR44352 - chr2L 9028017 intron,intron CG9582 -,CR44352 - chr2L 9028075 intron,intron CG9582 -,CR44352 - chr2L_10_9025001 chr2L_9025001 RAL-307_100b 363 chr2L 9040004 9040060 chr2L 9040116 9040172 46 110 10.0 11.0 10.5 4.0 168 chr2L 9040004 intergenic not near genes chr2L 9040088 intergenic not near genes chr2L 9040172 intergenic not near genes chr2L_46_9040001 chr2L_9040001 RAL-307_100b 364 chr2L 9044078 9044128 chr2L 9044201 9044260 13 124 1.5 11.0 6.2 1.8 182 chr2L 9044078 intergenic not near genes chr2L 9044169 intergenic not near genes chr2L 9044260 intergenic not near genes chr2L_13_9040001 chr2L_9040001 RAL-307_100b 365 chr2L 9053387 9053429 chr2L 9053642 9053660 35 258 13.0 1.0 7.0 4.4 273 chr2L 9053387 exon CG31708 - chr2L 9053524 intron CG31708 - chr2L 9053660 intron CG31708 - chr2L_35_9050001 chr2L_9050001 RAL-307_100b 366 chr2L 9069656 9069672 chr2L 9069772 9069788 11 115 0.0 0.0 0.0 11.0 132 chr2L 9069656 intron CG31708 - chr2L 9069722 intron CG31708 - chr2L 9069788 intron CG31708 - chr2L_11_9065001 chr2L_9065001 RAL-307_100b 367 chr2L 9084337 9084340 chr2L 16217660 16217660 10 7133321 66.5 81.5 74.0 0.1 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-307_100b 368 chr2L 9109708 9109758 chr2L 9109814 9109872 26 106 19.5 0.0 9.8 2.4 164 chr2L 9109708 intergenic not near genes chr2L 9109790 intergenic not near genes chr2L 9109872 intergenic not near genes chr2L_26_9105001 chr2L_9105001 RAL-307_100b 369 chr2L 9127839 9127896 chr2L 9128429 9128481 51 590 92.0 94.5 93.2 0.5 642 chr2L 9127839 intron CG32982 + chr2L 9128160 intron CG32982 + chr2L 9128481 intron CG32982 + chr2L_51_9125001 chr2L_9125001 RAL-307_100b 370 chr2L 9217967 9218004 chr2L 9222779 9222819 Doc 17 4811 10.5 0.0 5.2 2.7 4852 chr2L 9217967 intron tai + chr2L 9220393 intron tai + chr2L 9222819 intron tai + chr2L_17_9220001 chr2L_9220001 RAL-307_100b 371 chr2L 9226186 9226231 chr2L 9226297 9226299 16 116 14.5 0.0 7.2 2.0 113 chr2L 9226186 intron tai + chr2L 9226242 intron tai + chr2L 9226299 intron tai + chr2L_16_9225001 chr2L_9225001 RAL-307_100b 372 chr2L 9226232 9226238 chr2L 9226294 9226351 26 96 11.0 0.0 5.5 4.0 119 chr2L 9226232 intron tai + chr2L 9226292 intron tai + chr2L 9226351 intron tai + chr2L_26_9225001 chr2L_9225001 RAL-307_100b 373 chr2L 9227201 9227248 chr2L 9227309 9227355 10 103 14.5 5.5 10.0 0.9 154 chr2L 9227201 intron tai + chr2L 9227278 intron tai + chr2L 9227355 intron tai + chr2L_10_9225001 chr2L_9225001 RAL-307_100b 374 chr2L 9259189 9259245 chr2L 9259307 9259356 37 105 16.0 15.5 15.8 2.2 167 chr2L 9259189 intron Ggamma30A + chr2L 9259272 intron Ggamma30A + chr2L 9259356 intron Ggamma30A + chr2L_37_9255001 chr2L_9255001 RAL-307_100b 375 chr2L 9264321 9264379 chr2L 9264446 9264504 45 124 18.0 11.5 14.8 2.8 183 chr2L 9264321 intron Ggamma30A + chr2L 9264412 intron Ggamma30A + chr2L 9264504 intron Ggamma30A + chr2L_45_9260001 chr2L_9260001 RAL-307_100b 376 chr2L 9270725 9270767 chr2L 9270834 9270887 40 115 26.5 19.0 22.8 1.7 162 chr2L 9270725 intron Ggamma30A + chr2L 9270806 intron Ggamma30A + chr2L 9270887 intron Ggamma30A + chr2L_40_9270001 chr2L_9270001 RAL-307_100b 377 chr2L 9279969 9280018 chr2L 9280080 9280137 18 117 4.5 11.5 8.0 2.0 168 chr2L 9279969 intron Ggamma30A + chr2L 9280053 intron Ggamma30A + chr2L 9280137 intron Ggamma30A + chr2L_18_9280001 chr2L_9280001 RAL-307_100b 378 chr2L 9287300 9287357 chr2L 9287422 9287479 53 120 11.5 17.0 14.2 3.5 179 chr2L 9287300 intron Ggamma30A + chr2L 9287390 intron Ggamma30A + chr2L 9287479 intron Ggamma30A + chr2L_53_9285001 chr2L_9285001 RAL-307_100b 379 chr2L 9290753 9290794 chr2L 9290854 9290896 15 96 6.0 5.0 5.5 2.3 143 chr2L 9290753 intron Ggamma30A + chr2L 9290824 intron Ggamma30A + chr2L 9290896 intron Ggamma30A + chr2L_15_9290001 chr2L_9290001 RAL-307_100b 380 chr2L 9290795 9290799 chr2L 9290851 9290901 5 85 4.5 5.0 4.8 0.9 106 chr2L 9290795 intron Ggamma30A + chr2L 9290848 intron Ggamma30A + chr2L 9290901 intron Ggamma30A + chr2L_5_9290001 chr2L_9290001 RAL-307_100b 381 chr2L 9297353 9297403 chr2L 9297455 9297505 47 100 15.5 17.5 16.5 2.7 152 chr2L 9297353 3` UTR Ggamma30A + chr2L 9297429 3` UTR Ggamma30A + chr2L 9297505 3` UTR Ggamma30A + chr2L_47_9295001 chr2L_9295001 RAL-307_100b 382 chr2L 9300676 9300698 chr2L 9300786 9300796 8 108 15.5 0.0 7.8 0.9 120 chr2L 9300676 3` UTR Ggamma30A + chr2L 9300736 3` UTR Ggamma30A + chr2L 9300796 3` UTR Ggamma30A + chr2L_8_9300001 chr2L_9300001 RAL-307_100b 383 chr2L 9304479 9304517 chr2L 9304583 9304621 27 104 6.5 14.0 10.2 2.4 142 chr2L 9304479 3` UTR CR42844 - chr2L 9304550 3` UTR CR42844 - chr2L 9304621 3` UTR CR42844 - chr2L_27_9300001 chr2L_9300001 RAL-307_100b 384 chr2L 9334992 9335042 chr2L 9335096 9335110 26 102 10.0 5.0 7.5 3.1 118 chr2L 9334992 intron Eaat1 + chr2L 9335051 intron Eaat1 + chr2L 9335110 intron Eaat1 + chr2L_26_9335001 chr2L_9335001 RAL-307_100b 385 chr2L 9337886 9337899 chr2L 9337988 9337996 8 100 27.5 13.0 20.2 0.4 110 chr2L 9337886 intron Eaat1 + chr2L 9337941 intron Eaat1 + chr2L 9337996 intron Eaat1 + chr2L_8_9335001 chr2L_9335001 RAL-307_100b 386 chr2L 9337900 9337930 chr2L 9337987 9338026 7 99 11.5 12.5 12.0 0.5 126 chr2L 9337900 intron Eaat1 + chr2L 9337963 intron Eaat1 + chr2L 9338026 intron Eaat1 + chr2L_7_9335001 chr2L_9335001 RAL-307_100b 387 chr2L 9357231 9357281 chr2L 9357337 9357362 44 104 13.5 6.5 10.0 4.0 131 chr2L 9357231 intergenic not near genes chr2L 9357296 intergenic not near genes chr2L 9357362 intergenic not near genes chr2L_44_9355001 chr2L_9355001 RAL-307_100b 388 chr2L 9387224 9387278 chr2L 9387347 9387401 41 122 8.5 5.5 7.0 5.1 177 chr2L 9387224 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387401 intron,5` UTR Shawl -,Aldh + chr2L_41_9385001 chr2L_9385001 RAL-307_100b 389 chr2L 9391558 9391613 chr2L 9391693 9391748 54 134 11.5 17.0 14.2 3.6 190 chr2L 9391558 intron,3` UTR Shawl -,Aldh + chr2L 9391653 intron Shawl - chr2L 9391748 intron Shawl - chr2L_54_9390001 chr2L_9390001 RAL-307_100b 390 chr2L 9393474 9393531 chr2L 9396466 9396518 jockey 57 2989 15.5 15.5 15.5 3.5 3044 chr2L 9393474 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396518 intron Shawl - chr2L_57_9390001 chr2L_9390001 RAL-307_100b 391 chr2L 9407883 9407906 chr2L 9407990 9408013 26 107 12.5 13.5 13.0 1.9 130 chr2L 9407883 intron Shawl - chr2L 9407948 intron Shawl - chr2L 9408013 intron Shawl - chr2L_26_9405001 chr2L_9405001 RAL-307_100b 392 chr2L 9454954 9455007 chr2L 9455081 9455134 44 127 13.0 10.5 11.8 3.4 180 chr2L 9454954 intron numb + chr2L 9455044 intron numb + chr2L 9455134 intron numb + chr2L_44_9455001 chr2L_9455001 RAL-307_100b 393 chr2L 9506292 9506300 chr2L 9506450 9506458 6 158 14.0 9.0 11.5 0.5 166 chr2L 9506292 intron CG33298 + chr2L 9506375 intron CG33298 + chr2L 9506458 intron CG33298 + chr2L_6_9505001 chr2L_9505001 RAL-307_100b 394 chr2L 9658488 9658541 chr2L 9658905 9658958 45 414 13.5 15.0 14.2 3.0 470 chr2L 9658488 intergenic not near genes chr2L 9658723 intergenic not near genes chr2L 9658958 intergenic not near genes chr2L_45_9655001 chr2L_9655001 RAL-307_100b 395 chr2L 9719751 9719777 chr2L 9719859 9719880 19 106 1.0 6.5 3.8 4.0 129 chr2L 9719751 intron Nckx30C - chr2L 9719816 intron Nckx30C - chr2L 9719880 intron Nckx30C - chr2L_19_9715001 chr2L_9715001 RAL-307_100b 396 chr2L 9730950 9730958 chr2L 9731058 9731066 6 108 34.0 19.0 26.5 0.2 116 chr2L 9730950 intron Nckx30C - chr2L 9731008 intron Nckx30C - chr2L 9731066 intron Nckx30C - chr2L_6_9730001 chr2L_9730001 RAL-307_100b 397 chr2L 9730959 9731006 chr2L 9731057 9731114 41 105 10.0 19.0 14.5 2.6 155 chr2L 9730959 intron Nckx30C - chr2L 9731036 intron Nckx30C - chr2L 9731114 intron Nckx30C - chr2L_41_9730001 chr2L_9730001 RAL-307_100b 398 chr2L 9734272 9734293 chr2L 9734378 9734384 22 103 15.5 42.0 28.8 0.7 112 chr2L 9734272 intron Nckx30C - chr2L 9734328 intron Nckx30C - chr2L 9734384 intron Nckx30C - chr2L_22_9730001 chr2L_9730001 RAL-307_100b 399 chr2L 9738446 9738502 chr2L 9738567 9738623 47 119 11.5 13.0 12.2 3.6 177 chr2L 9738446 intron Nckx30C - chr2L 9738534 intron Nckx30C - chr2L 9738623 intron Nckx30C - chr2L_47_9735001 chr2L_9735001 RAL-307_100b 400 chr2L 9770744 9770763 chr2L 9770874 9770893 13 129 13.5 17.5 15.5 0.8 149 chr2L 9770744 intron ppk18 - chr2L 9770818 intron ppk18 - chr2L 9770893 exon ppk18 - chr2L_13_9770001 chr2L_9770001 RAL-307_100b 401 chr2L 9871500 9871505 chr2L 9871609 9871614 4 109 18.5 12.0 15.2 0.2 114 chr2L 9871500 intron nAChRalpha6 - chr2L 9871557 intron nAChRalpha6 - chr2L 9871614 intron nAChRalpha6 - chr2L_4_9870001 chr2L_9870001 RAL-307_100b 402 chr2L 9871510 9871534 chr2L 9871608 9871643 25 108 8.0 11.5 9.8 2.3 133 chr2L 9871510 intron nAChRalpha6 - chr2L 9871576 intron nAChRalpha6 - chr2L 9871643 intron nAChRalpha6 - chr2L_25_9870001 chr2L_9870001 RAL-307_100b 403 chr2L 9956166 9956167 chr2L 19989157 19989158 4 10032991 35.5 87.0 61.2 0.1 10032992 chr2L 9956166 exon CG4709 + chr2L 14972662 intergenic CG42313 - chr2L 19989158 intron CG43861 - chr2L_4_14970001 chr2L_14970001 RAL-307_100b 404 chr2L 9973702 9973758 chr2L 9980846 9980902 HMS-Beagle 67 7138 18.0 24.0 21.0 3.0 7200 chr2L 9973702 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980902 intergenic not near genes chr2L_67_9975001 chr2L_9975001 RAL-307_100b 405 chr2L 9986340 9986365 chr2L 9986446 9986483 21 112 16.0 19.0 17.5 1.1 143 chr2L 9986340 intron bib + chr2L 9986412 intron bib + chr2L 9986483 intron bib + chr2L_21_9985001 chr2L_9985001 RAL-307_100b 406 chr2L 9986366 9986375 chr2L 9986445 9986490 10 108 13.5 18.5 16.0 0.6 124 chr2L 9986366 intron bib + chr2L 9986428 intron bib + chr2L 9986490 intron bib + chr2L_10_9985001 chr2L_9985001 RAL-307_100b 407 chr2L 9986376 9986384 chr2L 9986444 9986454 9 101 9.5 18.0 13.8 0.6 78 chr2L 9986376 intron bib + chr2L 9986415 intron bib + chr2L 9986454 intron bib + chr2L_9_9985001 chr2L_9985001 RAL-307_100b 408 chr2L 10011671 10011672 chr2L 14330583 14330609 4 4318921 95.5 72.0 83.8 0.0 4318938 chr2L 10011671 exon Trp1 + chr2L 12171140 exon CG17217 + chr2L 14330609 exon ms(2)34Fe + chr2L_4_12170001 chr2L_12170001 RAL-307_100b 409 chr2L 10040238 10040242 chr2L 10040344 10040348 5 106 4.5 15.0 9.8 0.5 110 chr2L 10040238 intergenic not near genes chr2L 10040293 intergenic not near genes chr2L 10040348 intergenic not near genes chr2L_5_10040001 chr2L_10040001 RAL-307_100b 410 chr2L 10095605 10095663 chr2L 10095710 10095768 47 101 16.5 14.0 15.2 2.9 163 chr2L 10095605 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095768 intron CG44153 - chr2L_47_10095001 chr2L_10095001 RAL-307_100b 411 chr2L 10105269 10105273 chr2L 10105370 10105374 5 101 36.0 24.0 30.0 0.2 105 chr2L 10105269 intron,intron CG44153 -,CG34109 + chr2L 10105322 intron,intron CG44153 -,CG34109 + chr2L 10105374 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-307_100b 412 chr2L 10105276 10105285 chr2L 10105362 10105385 7 98 28.5 17.5 23.0 0.3 109 chr2L 10105276 intron,intron CG44153 -,CG34109 + chr2L 10105330 intron,intron CG44153 -,CG34109 + chr2L 10105385 intron,intron CG44153 -,CG34109 + chr2L_7_10105001 chr2L_10105001 RAL-307_100b 413 chr2L 10105287 10105311 chr2L 10105361 10105377 29 95 19.0 17.0 18.0 1.5 90 chr2L 10105287 intron,intron CG44153 -,CG34109 + chr2L 10105332 intron,intron CG44153 -,CG34109 + chr2L 10105377 intron,intron CG44153 -,CG34109 + chr2L_29_10105001 chr2L_10105001 RAL-307_100b 414 chr2L 10120975 10120990 chr2L 10121081 10121096 17 105 26.5 11.0 18.8 0.9 121 chr2L 10120975 intron,intron CG44153 -,CG34109 + chr2L 10121036 intron,intron CG44153 -,CG34109 + chr2L 10121096 intron,intron CG44153 -,CG34109 + chr2L_17_10120001 chr2L_10120001 RAL-307_100b 415 chr2L 10153192 10153194 chr2L 10153281 10153283 4 92 35.5 12.5 24.0 0.2 91 chr2L 10153192 intron,exon CG44153 -,CG4839 + chr2L 10153238 intron,intron CG44153 -,CG4839 + chr2L 10153283 intron,intron CG44153 -,CG4839 + chr2L_4_10150001 chr2L_10150001 RAL-307_100b 416 chr2L 10153195 10153237 chr2L 10153279 10153319 48 96 15.0 12.0 13.5 3.3 124 chr2L 10153195 intron,exon CG44153 -,CG4839 + chr2L 10153257 intron,intron CG44153 -,CG4839 + chr2L 10153319 intron,intron CG44153 -,CG4839 + chr2L_48_10150001 chr2L_10150001 RAL-307_100b 417 chr2L 10156299 10156323 chr2L 10163794 10163817 blood 17 7494 32.5 17.5 25.0 0.7 7518 chr2L 10156299 intron,3` UTR CG44153 -,CG4839 + chr2L 10160058 intron CG44153 - chr2L 10163817 intron CG44153 - chr2L_17_10160001 chr2L_10160001 RAL-307_100b 418 chr2L 10156325 10156353 chr2L 10163790 10163839 blood 27 7488 15.0 16.0 15.5 1.6 7514 chr2L 10156325 intron,3` UTR CG44153 -,CG4839 + chr2L 10160082 intron CG44153 - chr2L 10163839 intron CG44153 - chr2L_27_10160001 chr2L_10160001 RAL-307_100b 419 chr2L 10175643 10175649 chr2L 10175746 10175760 7 110 10.5 23.0 16.8 0.4 117 chr2L 10175643 intron CG44153 - chr2L 10175702 intron CG44153 - chr2L 10175760 intron CG44153 - chr2L_7_10175001 chr2L_10175001 RAL-307_100b 420 chr2L 10176024 10176024 chr2L 16071771 16071771 5 5895747 80.0 71.5 75.8 0.1 5895747 chr2L 10176024 intron CG44153 - chr2L 13123898 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_5_13120001 chr2L_13120001 RAL-307_100b 421 chr2L 10176517 10176572 chr2L 10176825 10176879 42 305 4.5 12.5 8.5 4.4 362 chr2L 10176517 intron CG44153 - chr2L 10176698 intron CG44153 - chr2L 10176879 intron CG44153 - chr2L_42_10175001 chr2L_10175001 RAL-307_100b 422 chr2L 10177383 10177394 chr2L 10177488 10177499 7 105 6.5 12.0 9.2 0.7 116 chr2L 10177383 intron CG44153 - chr2L 10177441 intron CG44153 - chr2L 10177499 intron CG44153 - chr2L_7_10175001 chr2L_10175001 RAL-307_100b 423 chr2L 10209823 10209861 chr2L 10209925 10209936 24 97 10.0 2.5 6.2 3.3 113 chr2L 10209823 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209880 3` UTR CG5727 - chr2L 10209936 3` UTR CG5727 - chr2L_24_10205001 chr2L_10205001 RAL-307_100b 424 chr2L 10258408 10258440 chr2L 10258518 10258550 25 109 11.0 11.5 11.2 2.0 142 chr2L 10258408 intron Pten - chr2L 10258479 intron Pten - chr2L 10258550 exon Pten - chr2L_25_10255001 chr2L_10255001 RAL-307_100b 425 chr2L 10294649 10294688 chr2L 10294760 10294797 14 111 14.5 10.5 12.5 1.0 148 chr2L 10294649 intron Hand - chr2L 10294723 intron Hand - chr2L 10294797 intron Hand - chr2L_14_10290001 chr2L_10290001 RAL-307_100b 426 chr2L 10385597 10385602 chr2L 10385702 10385707 5 105 38.5 13.5 26.0 0.2 110 chr2L 10385597 exon cdc2 - chr2L 10385652 intron cdc2 - chr2L 10385707 intron cdc2 - chr2L_5_10385001 chr2L_10385001 RAL-307_100b 427 chr2L 10385603 10385651 chr2L 10385698 10385750 48 101 14.5 14.0 14.2 3.2 147 chr2L 10385603 exon cdc2 - chr2L 10385676 intron cdc2 - chr2L 10385750 intron cdc2 - chr2L_48_10385001 chr2L_10385001 RAL-307_100b 428 chr2L 10458188 10458215 chr2L 10458309 10458336 25 121 0.0 13.0 6.5 3.3 148 chr2L 10458188 intron LM408 + chr2L 10458262 intron LM408 + chr2L 10458336 intron LM408 + chr2L_25_10455001 chr2L_10455001 RAL-307_100b 429 chr2L 10490256 10490262 chr2L 10490363 10490364 6 106 47.5 22.0 34.8 0.2 108 chr2L 10490256 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490310 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490364 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_6_10490001 chr2L_10490001 RAL-307_100b 430 chr2L 10490265 10490308 chr2L 10490358 10490415 43 98 18.5 19.0 18.8 2.2 150 chr2L 10490265 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490340 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490415 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_43_10490001 chr2L_10490001 RAL-307_100b 431 chr2L 10495322 10495329 chr2L 10495424 10495431 8 101 19.0 35.0 27.0 0.3 109 chr2L 10495322 intron Myo31DF - chr2L 10495376 intron Myo31DF - chr2L 10495431 intron Myo31DF - chr2L_8_10495001 chr2L_10495001 RAL-307_100b 432 chr2L 10515334 10515389 chr2L 10515452 10515507 43 113 15.0 11.0 13.0 3.1 173 chr2L 10515334 intron,intron CG45083 -,Fatp - chr2L 10515420 intron,intron CG45083 -,Fatp - chr2L 10515507 intron,intron CG45083 -,Fatp - chr2L_43_10515001 chr2L_10515001 RAL-307_100b 433 chr2L 10531587 10531645 chr2L 10531704 10531762 32 117 0.0 11.0 5.5 4.9 175 chr2L 10531587 3` UTR Lip4 + chr2L 10531674 3` UTR Lip4 + chr2L 10531762 3` UTR Lip4 + chr2L_32_10530001 chr2L_10530001 RAL-307_100b 434 chr2L 10558765 10558767 chr2L 10558866 10558868 4 101 43.0 14.0 28.5 0.1 103 chr2L 10558765 intron Trim9 + chr2L 10558816 intron Trim9 + chr2L 10558868 intron Trim9 + chr2L_4_10555001 chr2L_10555001 RAL-307_100b 435 chr2L 10558768 10558824 chr2L 10558864 10558920 37 96 14.5 13.5 14.0 2.5 152 chr2L 10558768 intron Trim9 + chr2L 10558844 intron Trim9 + chr2L 10558920 intron Trim9 + chr2L_37_10555001 chr2L_10555001 RAL-307_100b 436 chr2L 10563885 10563946 chr2L 10564003 10564064 41 115 10.5 12.5 11.5 3.3 179 chr2L 10563885 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564064 intron Trim9 + chr2L_41_10560001 chr2L_10560001 RAL-307_100b 437 chr2L 10571452 10571455 chr2L 10571562 10571565 5 110 40.5 19.5 30.0 0.2 113 chr2L 10571452 intron Trim9 + chr2L 10571508 intron Trim9 + chr2L 10571565 intron Trim9 + chr2L_5_10570001 chr2L_10570001 RAL-307_100b 438 chr2L 10571456 10571495 chr2L 10571561 10571605 44 109 19.0 19.5 19.2 2.2 149 chr2L 10571456 intron Trim9 + chr2L 10571530 intron Trim9 + chr2L 10571605 intron Trim9 + chr2L_44_10570001 chr2L_10570001 RAL-307_100b 439 chr2L 10571496 10571503 chr2L 10571558 10571613 11 102 15.0 18.0 16.5 0.6 117 chr2L 10571496 intron Trim9 + chr2L 10571554 intron Trim9 + chr2L 10571613 intron Trim9 + chr2L_11_10570001 chr2L_10570001 RAL-307_100b 440 chr2L 10580768 10580824 chr2L 10580874 10580920 59 100 10.5 16.5 13.5 4.1 152 chr2L 10580768 intron Trim9 + chr2L 10580844 intron Trim9 + chr2L 10580920 intron Trim9 + chr2L_59_10580001 chr2L_10580001 RAL-307_100b 441 chr2L 10582510 10582516 chr2L 10582626 10582632 5 116 28.5 14.0 21.2 0.2 122 chr2L 10582510 intron Trim9 + chr2L 10582571 intron Trim9 + chr2L 10582632 intron Trim9 + chr2L_5_10580001 chr2L_10580001 RAL-307_100b 442 chr2L 10582517 10582527 chr2L 10582625 10582643 8 114 22.5 13.5 18.0 0.4 126 chr2L 10582517 intron Trim9 + chr2L 10582580 intron Trim9 + chr2L 10582643 intron Trim9 + chr2L_8_10580001 chr2L_10580001 RAL-307_100b 443 chr2L 10582529 10582561 chr2L 10582624 10582677 28 110 11.5 12.5 12.0 2.2 148 chr2L 10582529 intron Trim9 + chr2L 10582603 intron Trim9 + chr2L 10582677 intron Trim9 + chr2L_28_10580001 chr2L_10580001 RAL-307_100b 444 chr2L 10592820 10592872 chr2L 10600505 10600559 opus 59 7683 5.5 13.5 9.5 5.6 7739 chr2L 10592820 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600559 intron Trim9 + chr2L_59_10595001 chr2L_10595001 RAL-307_100b 445 chr2L 10604171 10604221 chr2L 10604280 10604305 21 105 19.5 6.0 12.8 1.5 134 chr2L 10604171 intron Trim9 + chr2L 10604238 intron Trim9 + chr2L 10604305 intron Trim9 + chr2L_21_10600001 chr2L_10600001 RAL-307_100b 446 chr2L 10634729 10634788 chr2L 10634834 10634892 39 103 9.0 9.5 9.2 3.8 163 chr2L 10634729 intron CG7329 - chr2L 10634810 intron CG7329 - chr2L 10634892 intron CG7329 - chr2L_39_10630001 chr2L_10630001 RAL-307_100b 447 chr2L 10647574 10647585 chr2L 10647724 10647724 6 148 41.5 65.5 53.5 0.1 150 chr2L 10647574 exon CG17097 + chr2L 10647649 exon CG17097 + chr2L 10647724 exon CG17097 + chr2L_6_10645001 chr2L_10645001 RAL-307_100b 448 chr2L 10647700 10647702 chr2L 10648114 10648116 5 414 65.5 99.5 82.5 0.1 416 chr2L 10647700 exon CG17097 + chr2L 10647908 exon CG17097 + chr2L 10648116 exon CG17097 + chr2L_5_10645001 chr2L_10645001 RAL-307_100b 449 chr2L 10688533 10688557 chr2L 10688634 10688658 14 101 10.5 12.5 11.5 1.1 125 chr2L 10688533 intergenic CG7294 - chr2L 10688596 intergenic CG7294 - chr2L 10688658 intergenic CG7294 - chr2L_14_10685001 chr2L_10685001 RAL-307_100b 450 chr2L 10688559 10688574 chr2L 10688629 10688675 10 96 7.0 10.0 8.5 1.1 116 chr2L 10688559 intergenic CG7294 - chr2L 10688617 intergenic CG7294 - chr2L 10688675 intergenic CG7294 - chr2L_10_10685001 chr2L_10685001 RAL-307_100b 451 chr2L 10696572 10696628 chr2L 10696687 10696743 73 111 16.0 15.0 15.5 4.4 171 chr2L 10696572 exon,5` UTR CG7300 -,CR44181 + chr2L 10696658 exon,5` UTR CG7300 -,CR44181 + chr2L 10696743 exon,5` UTR CG7300 -,CR44181 + chr2L_73_10695001 chr2L_10695001 RAL-307_100b 452 chr2L 10701787 10701847 chr2L 10701898 10701958 59 109 11.0 8.0 9.5 5.6 171 chr2L 10701787 intergenic Lip2 -,Lip1 - chr2L 10701872 intergenic Lip2 -,Lip1 - chr2L 10701958 3` UTR Lip2 - chr2L_59_10700001 chr2L_10700001 RAL-307_100b 453 chr2L 10746463 10746468 chr2L 10746701 10746706 5 237 4.5 15.5 10.0 0.5 243 chr2L 10746463 intron CG17124 - chr2L 10746584 intron CG17124 - chr2L 10746706 intron CG17124 - chr2L_5_10745001 chr2L_10745001 RAL-307_100b 454 chr2L 10746472 10746507 chr2L 10746699 10746744 29 236 4.0 14.5 9.2 2.8 272 chr2L 10746472 intron CG17124 - chr2L 10746608 intron CG17124 - chr2L 10746744 intron CG17124 - chr2L_29_10745001 chr2L_10745001 RAL-307_100b 455 chr2L 10755542 10755598 chr2L 10755676 10755732 48 133 9.5 8.5 9.0 4.8 190 chr2L 10755542 intron CG17124 - chr2L 10755637 intron CG17124 - chr2L 10755732 intron CG17124 - chr2L_48_10755001 chr2L_10755001 RAL-307_100b 456 chr2L 10763271 10763310 chr2L 10763390 10763430 21 121 16.0 12.5 14.2 1.4 159 chr2L 10763271 intron CG6495 + chr2L 10763350 intron CG6495 + chr2L 10763430 intron CG6495 + chr2L_21_10760001 chr2L_10760001 RAL-307_100b 457 chr2L 10787956 10788030 chr2L 10788074 10788131 14 106 0.5 18.5 9.5 1.3 175 chr2L 10787956 intron CG31869 - chr2L 10788044 intron CG31869 - chr2L 10788131 intron CG31869 - chr2L_14_10785001 chr2L_10785001 RAL-307_100b 458 chr2L 10812033 10812073 chr2L 10812152 10812192 26 118 7.5 14.0 10.8 2.2 159 chr2L 10812033 intron Nos - chr2L 10812112 intron Nos - chr2L 10812192 intron Nos - chr2L_26_10810001 chr2L_10810001 RAL-307_100b 459 chr2L 10836734 10836781 chr2L 10836838 10836883 15 103 8.5 8.0 8.2 1.6 149 chr2L 10836734 intron Nos - chr2L 10836808 intron Nos - chr2L 10836883 intron Nos - chr2L_15_10835001 chr2L_10835001 RAL-307_100b 460 chr2L 10862842 10862850 chr2L 10864456 10864489 Rt1c 10 1634 27.5 19.0 23.2 0.4 1647 chr2L 10862842 3` UTR CR43807 - chr2L 10863666 intron CR43807 - chr2L 10864489 3` UTR CR43807 - chr2L_10_10860001 chr2L_10860001 RAL-307_100b 461 chr2L 10862852 10862883 chr2L 10864454 10864457 Rt1c 27 1620 12.0 17.5 14.8 1.7 1605 chr2L 10862852 3` UTR CR43807 - chr2L 10863654 intron CR43807 - chr2L 10864457 intron CR43807 - chr2L_27_10860001 chr2L_10860001 RAL-307_100b 462 chr2L 10876551 10876567 chr2L 10883632 10883647 297 7 7080 19.5 23.0 21.2 0.3 7096 chr2L 10876551 intergenic not near genes chr2L 10880099 intergenic not near genes chr2L 10883647 intergenic not near genes chr2L_7_10880001 chr2L_10880001 RAL-307_100b 463 chr2L 10928557 10928607 chr2L 10928684 10928734 31 122 13.0 16.5 14.8 2.0 177 chr2L 10928557 intron dpr2 - chr2L 10928646 intron dpr2 - chr2L 10928734 intron dpr2 - chr2L_31_10925001 chr2L_10925001 RAL-307_100b 464 chr2L 10944454 10944470 chr2L 10944559 10944578 13 107 0.0 16.5 8.2 1.4 124 chr2L 10944454 intron dpr2 - chr2L 10944516 intron dpr2 - chr2L 10944578 intron dpr2 - chr2L_13_10940001 chr2L_10940001 RAL-307_100b 465 chr2L 10946926 10946976 chr2L 10956166 10956209 roo 50 9237 16.0 27.0 21.5 2.2 9283 chr2L 10946926 intron dpr2 - chr2L 10951568 intron dpr2 - chr2L 10956209 intron dpr2 - chr2L_50_10950001 chr2L_10950001 RAL-307_100b 466 chr2L 11073027 11073065 chr2L 11073130 11073167 19 103 14.5 10.0 12.2 1.4 140 chr2L 11073027 intergenic not near genes chr2L 11073097 intergenic not near genes chr2L 11073167 intergenic not near genes chr2L_19_11070001 chr2L_11070001 RAL-307_100b 467 chr2L 11183761 11183812 chr2L 11183882 11183933 39 119 15.0 12.0 13.5 2.7 172 chr2L 11183761 intron Ca-beta - chr2L 11183847 intron Ca-beta - chr2L 11183933 intron Ca-beta - chr2L_39_11180001 chr2L_11180001 RAL-307_100b 468 chr2L 11193557 11193594 chr2L 11193665 11193705 20 114 0.0 20.5 10.2 1.8 148 chr2L 11193557 intron Ca-beta - chr2L 11193631 intron Ca-beta - chr2L 11193705 intron Ca-beta - chr2L_20_11190001 chr2L_11190001 RAL-307_100b 469 chr2L 11315243 11315270 chr2L 11317672 11317699 G2 22 2427 14.0 11.5 12.8 1.6 2456 chr2L 11315243 intergenic not near genes chr2L 11316471 intergenic not near genes chr2L 11317699 intergenic not near genes chr2L_22_11315001 chr2L_11315001 RAL-307_100b 470 chr2L 11339715 11339743 chr2L 11339812 11339841 25 99 18.0 12.5 15.2 1.5 126 chr2L 11339715 intergenic not near genes chr2L 11339778 intergenic not near genes chr2L 11339841 intergenic not near genes chr2L_25_11335001 chr2L_11335001 RAL-307_100b 471 chr2L 11379922 11379977 chr2L 11380029 11380084 12 104 14.5 0.0 7.2 1.5 162 chr2L 11379922 intergenic not near genes chr2L 11380003 intergenic not near genes chr2L 11380084 intergenic not near genes chr2L_12_11380001 chr2L_11380001 RAL-307_100b 472 chr2L 11380586 11380605 chr2L 11380688 11380707 15 101 11.0 12.0 11.5 1.2 121 chr2L 11380586 intergenic not near genes chr2L 11380646 intergenic not near genes chr2L 11380707 intergenic not near genes chr2L_15_11380001 chr2L_11380001 RAL-307_100b 473 chr2L 11380606 11380641 chr2L 11380687 11380743 23 95 5.0 12.0 8.5 2.4 137 chr2L 11380606 intergenic not near genes chr2L 11380674 intergenic not near genes chr2L 11380743 intergenic not near genes chr2L_23_11380001 chr2L_11380001 RAL-307_100b 474 chr2L 11390696 11390755 chr2L 11390824 11390883 47 126 11.5 15.5 13.5 3.2 187 chr2L 11390696 3` UTR CR43681 - chr2L 11390790 3` UTR CR43681 - chr2L 11390883 3` UTR CR43681 - chr2L_47_11390001 chr2L_11390001 RAL-307_100b 475 chr2L 11394999 11395002 chr2L 11395101 11395104 4 102 35.5 0.0 17.8 0.2 105 chr2L 11394999 intergenic not near genes chr2L 11395052 intergenic not near genes chr2L 11395104 intergenic not near genes chr2L_4_11395001 chr2L_11395001 RAL-307_100b 476 chr2L 11413266 11413320 chr2L 11413414 11413469 42 147 18.5 13.0 15.8 2.5 203 chr2L 11413266 intergenic not near genes chr2L 11413368 intergenic not near genes chr2L 11413469 intergenic not near genes chr2L_42_11410001 chr2L_11410001 RAL-307_100b 477 chr2L 11418630 11418688 chr2L 11418734 11418792 47 98 12.5 16.0 14.2 3.1 162 chr2L 11418630 intergenic not near genes chr2L 11418711 intergenic not near genes chr2L 11418792 intergenic not near genes chr2L_47_11415001 chr2L_11415001 RAL-307_100b 478 chr2L 11450106 11450123 chr2L 11450211 11450234 21 109 4.5 18.0 11.2 1.7 128 chr2L 11450106 intergenic not near genes chr2L 11450170 intergenic not near genes chr2L 11450234 intergenic not near genes chr2L_21_11450001 chr2L_11450001 RAL-307_100b 479 chr2L 11450124 11450157 chr2L 11450206 11450260 15 103 0.0 13.5 6.8 1.9 136 chr2L 11450124 intergenic not near genes chr2L 11450192 intergenic not near genes chr2L 11450260 intergenic not near genes chr2L_15_11450001 chr2L_11450001 RAL-307_100b 480 chr2L 11491111 11491121 chr2L 11491215 11491227 8 105 26.5 19.0 22.8 0.3 116 chr2L 11491111 intergenic not near genes chr2L 11491169 intergenic not near genes chr2L 11491227 intergenic not near genes chr2L_8_11490001 chr2L_11490001 RAL-307_100b 481 chr2L 11491127 11491160 chr2L 11491211 11491264 27 97 14.5 17.5 16.0 1.6 137 chr2L 11491127 intergenic not near genes chr2L 11491196 intergenic not near genes chr2L 11491264 intergenic not near genes chr2L_27_11490001 chr2L_11490001 RAL-307_100b 482 chr2L 11492987 11492996 chr2L 11493152 11493161 12 165 0.0 7.0 3.5 2.7 174 chr2L 11492987 intergenic not near genes chr2L 11493074 intergenic not near genes chr2L 11493161 intergenic not near genes chr2L_12_11490001 chr2L_11490001 RAL-307_100b 483 chr2L 11536697 11536703 chr2L 11536803 11536809 7 106 17.5 0.0 8.8 0.7 112 chr2L 11536697 exon CG43438 + chr2L 11536753 3` UTR CG43438 + chr2L 11536809 3` UTR CG43438 + chr2L_7_11535001 chr2L_11535001 RAL-307_100b 484 chr2L 11537728 11537782 chr2L 11537870 11537924 27 142 7.5 8.5 8.0 3.0 196 chr2L 11537728 intergenic not near genes chr2L 11537826 intergenic not near genes chr2L 11537924 intergenic not near genes chr2L_27_11535001 chr2L_11535001 RAL-307_100b 485 chr2L 11540566 11540589 chr2L 11547993 11548001 Tabor 14 7426 15.0 12.5 13.8 0.9 7435 chr2L 11540566 intergenic not near genes chr2L 11544284 intergenic not near genes chr2L 11548001 intergenic not near genes chr2L_14_11540001 chr2L_11540001 RAL-307_100b 486 chr2L 11540591 11540616 chr2L 11547988 11548032 Tabor 19 7425 8.0 11.5 9.8 1.8 7441 chr2L 11540591 intergenic not near genes chr2L 11544312 intergenic not near genes chr2L 11548032 intergenic not near genes chr2L_19_11540001 chr2L_11540001 RAL-307_100b 487 chr2L 11555384 11555428 chr2L 11555529 11555572 17 143 10.0 4.0 7.0 2.1 188 chr2L 11555384 intergenic not near genes chr2L 11555478 intergenic not near genes chr2L 11555572 intergenic not near genes chr2L_17_11555001 chr2L_11555001 RAL-307_100b 488 chr2L 11563619 11563623 chr2L 11568848 11568852 copia 4 5229 32.0 21.5 26.8 0.1 5233 chr2L 11563619 intergenic not near genes chr2L 11566236 intergenic not near genes chr2L 11568852 intergenic not near genes chr2L_4_11565001 chr2L_11565001 RAL-307_100b 489 chr2L 11563624 11563669 chr2L 11568843 11568887 copia 33 5226 13.0 20.0 16.5 1.9 5263 chr2L 11563624 intergenic not near genes chr2L 11566256 intergenic not near genes chr2L 11568887 intergenic not near genes chr2L_33_11565001 chr2L_11565001 RAL-307_100b 490 chr2L 11584648 11584664 chr2L 11584753 11584769 8 104 36.5 6.0 21.2 0.4 121 chr2L 11584648 intron kek2 + chr2L 11584708 intron kek2 + chr2L 11584769 intron kek2 + chr2L_8_11580001 chr2L_11580001 RAL-307_100b 491 chr2L 11585234 11585238 chr2L 11585288 11585339 7 92 5.5 19.0 12.2 0.5 105 chr2L 11585234 intron kek2 + chr2L 11585286 intron kek2 + chr2L 11585339 intron kek2 + chr2L_7_11585001 chr2L_11585001 RAL-307_100b 492 chr2L 11614029 11614045 chr2L 11615549 11615565 hopper2 7 1516 30.5 10.5 20.5 0.3 1536 chr2L 11614029 intron kek2 + chr2L 11614797 intron kek2 + chr2L 11615565 intron kek2 + chr2L_7_11610001 chr2L_11610001 RAL-307_100b 493 chr2L 11614049 11614085 chr2L 11615547 11615598 hopper2 28 1510 13.5 10.0 11.8 2.2 1549 chr2L 11614049 intron kek2 + chr2L 11614824 intron kek2 + chr2L 11615598 intron kek2 + chr2L_28_11610001 chr2L_11610001 RAL-307_100b 494 chr2L 11618526 11618576 chr2L 11618642 11618684 45 114 11.0 18.0 14.5 2.9 158 chr2L 11618526 intron kek2 + chr2L 11618605 intron kek2 + chr2L 11618684 intron kek2 + chr2L_45_11615001 chr2L_11615001 RAL-307_100b 495 chr2L 11633143 11633190 chr2L 11633270 11633317 25 124 12.5 20.5 16.5 1.4 174 chr2L 11633143 intergenic not near genes chr2L 11633230 intergenic not near genes chr2L 11633317 intergenic not near genes chr2L_25_11630001 chr2L_11630001 RAL-307_100b 496 chr2L 11633191 11633198 chr2L 11633268 11633325 6 98 9.5 20.0 14.8 0.4 134 chr2L 11633191 intergenic not near genes chr2L 11633258 intergenic not near genes chr2L 11633325 intergenic not near genes chr2L_6_11630001 chr2L_11630001 RAL-307_100b 497 chr2L 11672112 11672167 chr2L 11672244 11672299 39 130 9.0 11.0 10.0 3.5 187 chr2L 11672112 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672299 intergenic not near genes chr2L_39_11670001 chr2L_11670001 RAL-307_100b 498 chr2L 11676305 11676345 chr2L 11676418 11676457 11 112 0.0 0.0 0.0 11.0 152 chr2L 11676305 intergenic not near genes chr2L 11676381 intergenic not near genes chr2L 11676457 intergenic not near genes chr2L_11_11675001 chr2L_11675001 RAL-307_100b 499 chr2L 11710137 11710153 chr2L 11710238 11710254 12 101 13.5 0.0 6.8 1.5 117 chr2L 11710137 intergenic not near genes chr2L 11710196 intergenic not near genes chr2L 11710254 intergenic not near genes chr2L_12_11710001 chr2L_11710001 RAL-307_100b 500 chr2L 11713483 11713509 chr2L 11720974 11721000 blood 24 7487 32.0 15.5 23.8 1.0 7517 chr2L 11713483 intergenic not near genes chr2L 11717242 intergenic not near genes chr2L 11721000 intergenic CR44143 + chr2L_24_11715001 chr2L_11715001 RAL-307_100b 501 chr2L 11713510 11713539 chr2L 11720973 11721032 blood 28 7486 19.0 15.0 17.0 1.6 7522 chr2L 11713510 intergenic not near genes chr2L 11717271 intergenic not near genes chr2L 11721032 intergenic CR44143 + chr2L_28_11715001 chr2L_11715001 RAL-307_100b 502 chr2L 11750301 11750342 chr2L 11750612 11750653 39 308 9.5 10.0 9.8 3.6 352 chr2L 11750301 intergenic not near genes chr2L 11750477 intergenic not near genes chr2L 11750653 intergenic not near genes chr2L_39_11750001 chr2L_11750001 RAL-307_100b 503 chr2L 11825682 11825704 chr2L 11825786 11825795 11 101 24.5 0.0 12.2 0.8 113 chr2L 11825682 intron Pde1c - chr2L 11825738 intron Pde1c - chr2L 11825795 intron Pde1c - chr2L_11_11825001 chr2L_11825001 RAL-307_100b 504 chr2L 11846985 11847041 chr2L 11847323 11847379 42 334 12.0 18.0 15.0 2.6 394 chr2L 11846985 intron Pde1c - chr2L 11847182 intron Pde1c - chr2L 11847379 intron,exon Pde1c -,Mal-B1 + chr2L_42_11845001 chr2L_11845001 RAL-307_100b 505 chr2L 11931939 11931999 chr2L 11932044 11932104 56 100 12.5 18.0 15.2 3.5 165 chr2L 11931939 intergenic not near genes chr2L 11932022 intergenic not near genes chr2L 11932104 intergenic not near genes chr2L_56_11930001 chr2L_11930001 RAL-307_100b 506 chr2L 12026757 12026776 chr2L 12026963 12026982 7 206 4.5 0.0 2.2 2.2 225 chr2L 12026757 intergenic not near genes chr2L 12026870 intergenic not near genes chr2L 12026982 intergenic dmGlut + chr2L_7_12025001 chr2L_12025001 RAL-307_100b 507 chr2L 12031359 12031418 chr2L 12031465 12031524 42 103 11.0 7.0 9.0 4.2 165 chr2L 12031359 intron dmGlut + chr2L 12031442 intron dmGlut + chr2L 12031524 intron dmGlut + chr2L_42_12030001 chr2L_12030001 RAL-307_100b 508 chr2L 12067307 12067355 chr2L 12074384 12074432 297 40 7075 15.5 15.0 15.2 2.5 7125 chr2L 12067307 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074432 intergenic not near genes chr2L_40_12070001 chr2L_12070001 RAL-307_100b 509 chr2L 12132697 12132750 chr2L 12132808 12132861 42 109 0.0 12.0 6.0 6.0 164 chr2L 12132697 intron rho-6 - chr2L 12132779 intron rho-6 - chr2L 12132861 intron rho-6 - chr2L_42_12130001 chr2L_12130001 RAL-307_100b 510 chr2L 12153908 12153962 chr2L 12154010 12154064 52 100 15.0 13.5 14.2 3.4 156 chr2L 12153908 exon CG31760 + chr2L 12153986 intron CG31760 + chr2L 12154064 intron CG31760 + chr2L_52_12150001 chr2L_12150001 RAL-307_100b 511 chr2L 12179788 12179840 chr2L 12180529 12180582 41 738 7.5 17.0 12.2 3.1 794 chr2L 12179788 intron aret + chr2L 12180185 intron aret + chr2L 12180582 intron aret + chr2L_41_12180001 chr2L_12180001 RAL-307_100b 512 chr2L 12210026 12210046 chr2L 12210134 12210160 20 112 14.0 16.5 15.2 1.2 134 chr2L 12210026 intron aret + chr2L 12210093 intron aret + chr2L 12210160 intron aret + chr2L_20_12210001 chr2L_12210001 RAL-307_100b 513 chr2L 12250668 12250723 chr2L 12250770 12250825 37 99 10.5 13.5 12.0 2.8 157 chr2L 12250668 intron aret + chr2L 12250746 intron aret + chr2L 12250825 intron aret + chr2L_37_12250001 chr2L_12250001 RAL-307_100b 514 chr2L 12254002 12254041 chr2L 12254119 12254137 24 114 17.5 0.0 8.8 2.4 135 chr2L 12254002 intron aret + chr2L 12254070 intron aret + chr2L 12254137 intron aret + chr2L_24_12250001 chr2L_12250001 RAL-307_100b 515 chr2L 12263915 12263973 chr2L 12264022 12264045 54 104 10.5 12.5 11.5 4.3 130 chr2L 12263915 intron aret + chr2L 12263980 intron aret + chr2L 12264045 intron aret + chr2L_54_12260001 chr2L_12260001 RAL-307_100b 516 chr2L 12269387 12269400 chr2L 12269490 12269503 14 103 18.5 18.0 18.2 0.7 116 chr2L 12269387 intron aret + chr2L 12269445 intron aret + chr2L 12269503 intron aret + chr2L_14_12265001 chr2L_12265001 RAL-307_100b 517 chr2L 12272412 12272468 chr2L 12272522 12272579 47 109 16.0 17.5 16.8 2.6 167 chr2L 12272412 intron aret + chr2L 12272496 intron aret + chr2L 12272579 intron aret + chr2L_47_12270001 chr2L_12270001 RAL-307_100b 518 chr2L 12305387 12305438 chr2L 12305497 12305551 57 111 17.5 18.0 17.8 3.0 164 chr2L 12305387 intron aret + chr2L 12305469 intron aret + chr2L 12305551 intron aret + chr2L_57_12305001 chr2L_12305001 RAL-307_100b 519 chr2L 12394963 12394995 chr2L 12395100 12395132 32 137 8.5 9.0 8.8 3.3 169 chr2L 12394963 intron bru-2 + chr2L 12395048 intron bru-2 + chr2L 12395132 intron bru-2 + chr2L_32_12395001 chr2L_12395001 RAL-307_100b 520 chr2L 12466208 12466240 chr2L 12466319 12466351 12 111 0.0 0.5 0.2 10.0 143 chr2L 12466208 intron bun - chr2L 12466280 intron bun - chr2L 12466351 intron bun - chr2L_12_12465001 chr2L_12465001 RAL-307_100b 521 chr2L 12487859 12487919 chr2L 12487965 12488014 60 101 9.5 18.0 13.8 4.1 155 chr2L 12487859 intron bun - chr2L 12487936 intron bun - chr2L 12488014 intron bun - chr2L_60_12485001 chr2L_12485001 RAL-307_100b 522 chr2L 12492670 12492683 chr2L 12492776 12492789 9 106 11.0 0.0 5.5 1.4 119 chr2L 12492670 intron bun - chr2L 12492730 intron bun - chr2L 12492789 intron bun - chr2L_9_12490001 chr2L_12490001 RAL-307_100b 523 chr2L 12495678 12495735 chr2L 12495785 12495842 52 104 4.5 10.0 7.2 6.3 164 chr2L 12495678 intron bun - chr2L 12495760 intron bun - chr2L 12495842 intron bun - chr2L_52_12495001 chr2L_12495001 RAL-307_100b 524 chr2L 12529218 12529434 chr2L 12529376 12529519 51 126 1.5 0.5 1.0 25.5 301 chr2L 12529218 intron bun - chr2L 12529368 intron bun - chr2L 12529519 intron bun - chr2L_51_12525001 chr2L_12525001 RAL-307_100b 525 chr2L 12558306 12558319 chr2L 12565449 12565473 HMS-Beagle 12 7147 34.5 11.0 22.8 0.5 7167 chr2L 12558306 intergenic not near genes chr2L 12561890 intergenic not near genes chr2L 12565473 intergenic not near genes chr2L_12_12560001 chr2L_12560001 RAL-307_100b 526 chr2L 12558321 12558352 chr2L 12565447 12565506 HMS-Beagle 37 7149 12.0 11.0 11.5 3.0 7185 chr2L 12558321 intergenic not near genes chr2L 12561914 intergenic not near genes chr2L 12565506 intergenic not near genes chr2L_37_12560001 chr2L_12560001 RAL-307_100b 527 chr2L 12619877 12619906 chr2L 12619978 12620007 22 99 16.5 12.5 14.5 1.4 130 chr2L 12619877 intron,intron nub +,Ref2 - chr2L 12619942 intron,intron nub +,Ref2 - chr2L 12620007 intron,intron nub +,Ref2 - chr2L_22_12615001 chr2L_12615001 RAL-307_100b 528 chr2L 12638751 12638808 chr2L 12638879 12638936 61 125 13.5 12.0 12.8 4.4 185 chr2L 12638751 intron Ref2 - chr2L 12638844 intron Ref2 - chr2L 12638936 intron Ref2 - chr2L_61_12635001 chr2L_12635001 RAL-307_100b 529 chr2L 5121161 5121162 chr2L 12673719 12673725 6 7552559 28.5 47.0 37.8 0.2 7552564 chr2L 5121161 intron Msp300 + chr2L 8897443 intergenic not near genes chr2L 12673725 intron pdm2 + chr2L_6_8895001 chr2L_8895001 RAL-307_100b 530 chr2L 12699825 12699873 chr2L 12699922 12699933 28 87 14.0 19.5 16.8 1.6 108 chr2L 12699825 exon CG17036 - chr2L 12699879 exon CG17036 - chr2L 12699933 exon CG17036 - chr2L_28_12695001 chr2L_12695001 RAL-307_100b 531 chr2L 12731034 12731093 chr2L 12735826 12735842 F-element 49 4789 11.0 16.5 13.8 3.3 4808 chr2L 12731034 intron MRP + chr2L 12733438 intron MRP + chr2L 12735842 intron MRP + chr2L_49_12730001 chr2L_12730001 RAL-307_100b 532 chr2L 12739152 12739167 chr2L 12743958 12743973 Doc 12 4805 43.0 23.0 33.0 0.4 4821 chr2L 12739152 exon MRP + chr2L 12741562 intron MRP + chr2L 12743973 intron MRP + chr2L_12_12740001 chr2L_12740001 RAL-307_100b 533 chr2L 12739168 12739198 chr2L 12743955 12744004 Doc 34 4802 24.0 21.0 22.5 1.4 4836 chr2L 12739168 exon MRP + chr2L 12741586 intron MRP + chr2L 12744004 exon MRP + chr2L_34_12740001 chr2L_12740001 RAL-307_100b 534 chr2L 12751283 12751341 chr2L 12751391 12751449 49 106 13.0 15.5 14.2 3.2 166 chr2L 12751283 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751449 intergenic not near genes chr2L_49_12750001 chr2L_12750001 RAL-307_100b 535 chr2L 12760222 12760257 chr2L 12760341 12760378 42 120 13.5 15.0 14.2 2.8 156 chr2L 12760222 intergenic CG15483 - chr2L 12760300 intergenic CG15483 - chr2L 12760378 3` UTR CG15483 - chr2L_42_12760001 chr2L_12760001 RAL-307_100b 536 chr2L 12763809 12763866 chr2L 12764044 12764091 BS 9 233 1.0 0.0 0.5 6.0 282 chr2L 12763809 intergenic not near genes chr2L 12763950 intergenic not near genes chr2L 12764091 intergenic not near genes chr2L_9_12760001 chr2L_12760001 RAL-307_100b 537 chr2L 12766737 12766778 chr2L 12766840 12766881 32 101 9.5 13.5 11.5 2.6 144 chr2L 12766737 intergenic not near genes chr2L 12766809 intergenic not near genes chr2L 12766881 intergenic not near genes chr2L_32_12765001 chr2L_12765001 RAL-307_100b 538 chr2L 12781777 12781815 chr2L 12789245 12789277 Quasimodo 28 7464 20.5 19.0 19.8 1.3 7500 chr2L 12781777 intergenic not near genes chr2L 12785527 intergenic not near genes chr2L 12789277 intergenic not near genes chr2L_28_12785001 chr2L_12785001 RAL-307_100b 539 chr2L 12791582 12791612 chr2L 12795282 12795312 F-element 21 3699 24.5 19.5 22.0 0.9 3730 chr2L 12791582 intergenic not near genes chr2L 12793447 intergenic not near genes chr2L 12795312 intergenic not near genes chr2L_21_12790001 chr2L_12790001 RAL-307_100b 540 chr2L 12791614 12791629 chr2L 12795277 12795279 F-element 28 3679 20.0 16.0 18.0 1.5 3665 chr2L 12791614 intergenic not near genes chr2L 12793446 intergenic not near genes chr2L 12795279 intergenic not near genes chr2L_28_12790001 chr2L_12790001 RAL-307_100b 541 chr2L 12807412 12807467 chr2L 12807519 12807574 37 104 16.0 13.0 14.5 2.4 162 chr2L 12807412 intergenic CR43818 - chr2L 12807493 intergenic CR43818 - chr2L 12807574 intergenic CR43818 - chr2L_37_12805001 chr2L_12805001 RAL-307_100b 542 chr2L 12835535 12835586 chr2L 12835663 12835720 23 129 12.0 4.0 8.0 2.6 185 chr2L 12835535 intergenic not near genes chr2L 12835628 intergenic not near genes chr2L 12835720 intergenic not near genes chr2L_23_12835001 chr2L_12835001 RAL-307_100b 543 chr2L 12848401 12848466 chr2L 12848518 12848579 45 111 7.0 11.5 9.2 4.4 178 chr2L 12848401 intergenic not near genes chr2L 12848490 intergenic not near genes chr2L 12848579 intergenic not near genes chr2L_45_12845001 chr2L_12845001 RAL-307_100b 544 chr2L 12861680 12861710 chr2L 12863164 12863202 hobo 32 1489 21.0 19.5 20.2 1.5 1522 chr2L 12861680 intergenic not near genes chr2L 12862441 intergenic not near genes chr2L 12863202 intergenic not near genes chr2L_32_12860001 chr2L_12860001 RAL-307_100b 545 chr2L 12861712 12861731 chr2L 12863163 12863188 hobo 25 1478 11.0 18.5 14.8 1.6 1476 chr2L 12861712 intergenic not near genes chr2L 12862450 intergenic not near genes chr2L 12863188 intergenic not near genes chr2L_25_12860001 chr2L_12860001 RAL-307_100b 546 chr2L 12894010 12894045 chr2L 12895488 12895507 hobo 23 1481 16.5 29.5 23.0 1.0 1497 chr2L 12894010 intergenic not near genes chr2L 12894758 intergenic not near genes chr2L 12895507 intergenic not near genes chr2L_23_12890001 chr2L_12890001 RAL-307_100b 547 chr2L 12905452 12905498 chr2L 12905561 12905607 36 108 16.0 8.0 12.0 2.8 155 chr2L 12905452 intergenic not near genes chr2L 12905530 intergenic not near genes chr2L 12905607 intergenic not near genes chr2L_36_12905001 chr2L_12905001 RAL-307_100b 548 chr2L 12933827 12933881 chr2L 12941319 12941373 blood 56 7489 18.0 20.0 19.0 2.8 7546 chr2L 12933827 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941373 intergenic not near genes chr2L_56_12935001 chr2L_12935001 RAL-307_100b 549 chr2L 12989021 12989079 chr2L 12989134 12989160 53 109 10.5 13.0 11.8 4.1 139 chr2L 12989021 intergenic not near genes chr2L 12989090 intergenic not near genes chr2L 12989160 intergenic not near genes chr2L_53_12985001 chr2L_12985001 RAL-307_100b 550 chr2L 13036220 13036272 chr2L 13036487 13036532 X-element 44 266 13.0 14.0 13.5 3.0 312 chr2L 13036220 intron CG9932 - chr2L 13036376 intron CG9932 - chr2L 13036532 intron CG9932 - chr2L_44_13035001 chr2L_13035001 RAL-307_100b 551 chr2L 13043378 13043429 chr2L 13043482 13043532 32 100 18.0 14.0 16.0 1.9 154 chr2L 13043378 intron CG9932 - chr2L 13043455 intron CG9932 - chr2L 13043532 intron CG9932 - chr2L_32_13040001 chr2L_13040001 RAL-307_100b 552 chr2L 13114416 13114463 chr2L 13114531 13114568 17 114 0.5 0.0 0.2 14.2 152 chr2L 13114416 intergenic not near genes chr2L 13114492 intergenic not near genes chr2L 13114568 intergenic not near genes chr2L_17_13110001 chr2L_13110001 RAL-307_100b 553 chr2L 13185295 13185352 chr2L 13185399 13185456 63 100 18.0 16.5 17.2 3.5 161 chr2L 13185295 3` UTR CG16974 - chr2L 13185376 3` UTR CG16974 - chr2L 13185456 exon CG16974 - chr2L_63_13185001 chr2L_13185001 RAL-307_100b 554 chr2L 13241942 13241953 chr2L 13244345 13244352 BS 13 2406 24.5 21.5 23.0 0.5 2410 chr2L 13241942 5` UTR CR45330 + chr2L 13243147 intron CR45330 + chr2L 13244352 5` UTR CR45330 + chr2L_13_13240001 chr2L_13240001 RAL-307_100b 555 chr2L 13248896 13248951 chr2L 13249001 13249057 50 100 21.5 13.5 17.5 2.7 161 chr2L 13248896 intron CG16820 + chr2L 13248976 intron CG16820 + chr2L 13249057 intron CG16820 + chr2L_50_13245001 chr2L_13245001 RAL-307_100b 556 chr2L 13266353 13266371 chr2L 13266466 13266484 15 111 10.0 14.0 12.0 1.2 131 chr2L 13266353 intron CG44085 + chr2L 13266418 intron CG44085 + chr2L 13266484 intron CG44085 + chr2L_15_13265001 chr2L_13265001 RAL-307_100b 557 chr2L 13266374 13266412 chr2L 13266465 13266525 35 107 6.0 14.0 10.0 3.2 151 chr2L 13266374 intron CG44085 + chr2L 13266450 intron CG44085 + chr2L 13266525 intron CG44085 + chr2L_35_13265001 chr2L_13265001 RAL-307_100b 558 chr2L 13339269 13339308 chr2L 13339536 13339575 27 265 15.0 12.0 13.5 1.9 306 chr2L 13339269 intergenic not near genes chr2L 13339422 intergenic not near genes chr2L 13339575 intergenic not near genes chr2L_27_13335001 chr2L_13335001 RAL-307_100b 559 chr2L 13398692 13398751 chr2L 13398797 13398856 34 103 8.5 7.5 8.0 3.8 164 chr2L 13398692 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398856 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_34_13395001 chr2L_13395001 RAL-307_100b 560 chr2L 13405630 13405632 chr2L 13410449 13410454 Doc 5 4821 44.0 16.5 30.2 0.2 4824 chr2L 13405630 exon CG7110 + chr2L 13408042 intron CG7110 + chr2L 13410454 intron CG7110 + chr2L_5_13405001 chr2L_13405001 RAL-307_100b 561 chr2L 13405633 13405680 chr2L 13410448 13410490 Doc 32 4817 16.5 16.5 16.5 1.8 4857 chr2L 13405633 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410490 intron CG7110 + chr2L_32_13405001 chr2L_13405001 RAL-307_100b 562 chr2L 13449462 13449496 chr2L 13456897 13456957 Quasimodo 23 7458 8.5 15.0 11.8 1.8 7495 chr2L 13449462 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453210 intron CG42784 + chr2L 13456957 intron CG42784 + chr2L_23_13450001 chr2L_13450001 RAL-307_100b 563 chr2L 13481432 13481454 chr2L 13482064 13482080 jockey 18 630 29.0 29.0 29.0 0.6 648 chr2L 13481432 intron CG42784 + chr2L 13481756 intron CG42784 + chr2L 13482080 intron CG42784 + chr2L_18_13480001 chr2L_13480001 RAL-307_100b 564 chr2L 13481455 13481456 chr2L 13482061 13482088 jockey 7 625 28.0 28.0 28.0 0.2 633 chr2L 13481455 intron CG42784 + chr2L 13481772 intron CG42784 + chr2L 13482088 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-307_100b 565 chr2L 13481457 13481471 chr2L 13482055 13482087 jockey 15 626 22.0 20.5 21.2 0.7 630 chr2L 13481457 intron CG42784 + chr2L 13481772 intron CG42784 + chr2L 13482087 intron CG42784 + chr2L_15_13480001 chr2L_13480001 RAL-307_100b 566 chr2L 13522268 13522291 chr2L 13527593 13527601 Transpac 19 5325 9.5 30.0 19.8 0.9 5333 chr2L 13522268 intron B4 - chr2L 13524934 intron B4 - chr2L 13527601 intron B4 - chr2L_19_13520001 chr2L_13520001 RAL-307_100b 567 chr2L 13528683 13528717 chr2L 13528785 13528819 7 100 12.5 8.5 10.5 0.6 136 chr2L 13528683 intron B4 - chr2L 13528751 intron B4 - chr2L 13528819 intron B4 - chr2L_7_13525001 chr2L_13525001 RAL-307_100b 568 chr2L 13560382 13560421 chr2L 13565222 13565267 F-element 25 4844 15.5 16.0 15.8 1.5 4885 chr2L 13560382 intron kuz + chr2L 13562824 intron kuz + chr2L 13565267 intron kuz + chr2L_25_13560001 chr2L_13560001 RAL-307_100b 569 chr2L 13577380 13577391 chr2L 13577483 13577494 8 103 12.0 29.5 20.8 0.4 114 chr2L 13577380 intron kuz + chr2L 13577437 intron kuz + chr2L 13577494 intron kuz + chr2L_8_13575001 chr2L_13575001 RAL-307_100b 570 chr2L 13609532 13609539 chr2L 13609721 13609728 5 188 26.5 17.5 22.0 0.2 196 chr2L 13609532 intron kuz + chr2L 13609630 intron kuz + chr2L 13609728 intron kuz + chr2L_5_13605001 chr2L_13605001 RAL-307_100b 571 chr2L 13609544 13609562 chr2L 13609709 13609751 17 186 15.5 12.5 14.0 1.1 207 chr2L 13609544 intron kuz + chr2L 13609648 intron kuz + chr2L 13609751 intron kuz + chr2L_17_13605001 chr2L_13605001 RAL-307_100b 572 chr2L 13622111 13622124 chr2L 13622235 13622243 8 123 43.0 4.5 23.8 0.3 132 chr2L 13622111 intron kuz + chr2L 13622177 intron kuz + chr2L 13622243 intron kuz + chr2L_8_13620001 chr2L_13620001 RAL-307_100b 573 chr2L 13622126 13622168 chr2L 13622234 13622238 33 112 15.5 4.5 10.0 3.0 112 chr2L 13622126 intron kuz + chr2L 13622182 intron kuz + chr2L 13622238 intron kuz + chr2L_33_13620001 chr2L_13620001 RAL-307_100b 574 chr2L 13680767 13680822 chr2L 13680936 13680988 26 169 7.5 10.0 8.8 2.7 221 chr2L 13680767 intron CG31814 - chr2L 13680878 intron CG31814 - chr2L 13680988 intron CG31814 - chr2L_26_13680001 chr2L_13680001 RAL-307_100b 575 chr2L 13683152 13683155 chr2L 13683258 13683261 5 106 41.0 0.5 20.8 0.2 109 chr2L 13683152 exon CG31814 - chr2L 13683206 exon CG31814 - chr2L 13683261 intron CG31814 - chr2L_5_13680001 chr2L_13680001 RAL-307_100b 576 chr2L 13683156 13683181 chr2L 13683257 13683277 26 103 27.5 0.5 14.0 1.7 121 chr2L 13683156 exon CG31814 - chr2L 13683216 intron CG31814 - chr2L 13683277 intron CG31814 - chr2L_26_13680001 chr2L_13680001 RAL-307_100b 577 chr2L 13720212 13720240 chr2L 13720325 13720331 16 111 19.0 0.0 9.5 1.5 119 chr2L 13720212 intergenic not near genes chr2L 13720272 intergenic not near genes chr2L 13720331 intergenic not near genes chr2L_16_13720001 chr2L_13720001 RAL-307_100b 578 chr2L 13740043 13740094 chr2L 13740146 13740199 15 99 2.5 11.5 7.0 1.9 156 chr2L 13740043 intergenic not near genes chr2L 13740121 intergenic not near genes chr2L 13740199 intergenic not near genes chr2L_15_13740001 chr2L_13740001 RAL-307_100b 579 chr2L 13747295 13747343 chr2L 13747420 13747468 56 123 15.0 11.0 13.0 4.0 173 chr2L 13747295 intron,intron CR44846 +,TM9SF4 + chr2L 13747382 intron,intron CR44846 +,TM9SF4 + chr2L 13747468 intron,intron CR44846 +,TM9SF4 + chr2L_56_13745001 chr2L_13745001 RAL-307_100b 580 chr2L 13749190 13749211 chr2L 13749298 13749319 21 106 0.0 0.0 0.0 21.0 129 chr2L 13749190 intron,intron CR44846 +,TM9SF4 + chr2L 13749254 intron,intron CR44846 +,TM9SF4 + chr2L 13749319 intron,intron CR44846 +,TM9SF4 + chr2L_21_13745001 chr2L_13745001 RAL-307_100b 581 chr2L 13761780 13761835 chr2L 13762915 13762954 Doc 54 1130 16.5 14.5 15.5 3.3 1174 chr2L 13761780 intron TM9SF4 + chr2L 13762367 intron TM9SF4 + chr2L 13762954 intron TM9SF4 + chr2L_54_13760001 chr2L_13760001 RAL-307_100b 582 chr2L 13800155 13800206 chr2L 13800282 13800335 35 129 10.5 13.0 11.8 2.7 180 chr2L 13800155 intergenic Sec71 + chr2L 13800245 intergenic not near genes chr2L 13800335 intergenic not near genes chr2L_35_13800001 chr2L_13800001 RAL-307_100b 583 chr2L 13842105 13842164 chr2L 13842214 13842273 53 107 9.0 6.5 7.8 6.0 168 chr2L 13842105 intron CenG1A + chr2L 13842189 intron CenG1A + chr2L 13842273 intron CenG1A + chr2L_53_13840001 chr2L_13840001 RAL-307_100b 584 chr2L 13853063 13853077 chr2L 13862238 13862252 roo 13 9175 30.0 20.5 25.2 0.5 9189 chr2L 13853063 intron CenG1A + chr2L 13857658 intron CenG1A + chr2L 13862252 intron CenG1A + chr2L_13_13855001 chr2L_13855001 RAL-307_100b 585 chr2L 13853085 13853112 chr2L 13862234 13862243 roo 31 9170 19.0 18.0 18.5 1.6 9158 chr2L 13853085 intron CenG1A + chr2L 13857664 intron CenG1A + chr2L 13862243 intron CenG1A + chr2L_31_13855001 chr2L_13855001 RAL-307_100b 586 chr2L 13899043 13899052 chr2L 13899129 13899154 12 97 10.5 20.0 15.2 0.7 111 chr2L 13899043 3` UTR Smg5 - chr2L 13899098 3` UTR Smg5 - chr2L 13899154 3` UTR Smg5 - chr2L_12_13895001 chr2L_13895001 RAL-307_100b 587 chr2L 13899056 13899069 chr2L 13899123 13899171 10 94 6.0 18.0 12.0 0.8 115 chr2L 13899056 3` UTR Smg5 - chr2L 13899114 3` UTR Smg5 - chr2L 13899171 3` UTR Smg5 - chr2L_10_13895001 chr2L_13895001 RAL-307_100b 588 chr2L 13913568 13913577 chr2L 13913706 13913715 11 138 28.0 24.5 26.2 0.4 147 chr2L 13913568 intergenic not near genes chr2L 13913642 intergenic not near genes chr2L 13913715 intergenic not near genes chr2L_11_13910001 chr2L_13910001 RAL-307_100b 589 chr2L 13913578 13913605 chr2L 13913705 13913743 22 137 13.5 23.5 18.5 1.1 165 chr2L 13913578 intergenic not near genes chr2L 13913660 intergenic not near genes chr2L 13913743 intergenic not near genes chr2L_22_13910001 chr2L_13910001 RAL-307_100b 590 chr2L 13919937 13919951 chr2L 13919993 13920032 19 91 4.5 13.5 9.0 1.9 95 chr2L 13919937 intron Ance-3 + chr2L 13919984 intron Ance-3 + chr2L 13920032 intron Ance-3 + chr2L_19_13915001 chr2L_13915001 RAL-307_100b 591 chr2L 13988255 13988305 chr2L 13988367 13988417 44 110 14.0 14.0 14.0 2.9 162 chr2L 13988255 intron rk - chr2L 13988336 intron rk - chr2L 13988417 intron rk - chr2L_44_13985001 chr2L_13985001 RAL-307_100b 592 chr2L 14005156 14005199 chr2L 14005259 14005261 7 88 18.5 7.5 13.0 0.5 105 chr2L 14005156 intergenic not near genes chr2L 14005208 intergenic not near genes chr2L 14005261 intergenic not near genes chr2L_7_14005001 chr2L_14005001 RAL-307_100b 593 chr2L 14102839 14102853 chr2L 14102945 14102959 8 105 0.0 0.0 0.0 8.0 120 chr2L 14102839 intergenic not near genes chr2L 14102899 intergenic not near genes chr2L 14102959 intergenic not near genes chr2L_8_14100001 chr2L_14100001 RAL-307_100b 594 chr2L 14246226 14246233 chr2L 14246632 14246639 10 406 32.0 5.5 18.8 0.5 413 chr2L 14246226 intergenic not near genes chr2L 14246432 intergenic not near genes chr2L 14246639 intergenic not near genes chr2L_10_14245001 chr2L_14245001 RAL-307_100b 595 chr2L 14246236 14246245 chr2L 14246631 14246651 9 403 24.0 5.5 14.8 0.6 415 chr2L 14246236 intergenic not near genes chr2L 14246444 intergenic not near genes chr2L 14246651 intergenic not near genes chr2L_9_14245001 chr2L_14245001 RAL-307_100b 596 chr2L 14246246 14246261 chr2L 14246629 14246657 9 397 16.5 5.0 10.8 0.8 411 chr2L 14246246 intergenic not near genes chr2L 14246452 intergenic not near genes chr2L 14246657 intergenic not near genes chr2L_9_14245001 chr2L_14245001 RAL-307_100b 597 chr2L 14298464 14298508 chr2L 14298566 14298571 16 98 17.5 0.0 8.8 1.6 107 chr2L 14298464 intron wb + chr2L 14298518 intron wb + chr2L 14298571 intron wb + chr2L_16_14295001 chr2L_14295001 RAL-307_100b 598 chr2L 14301743 14301749 chr2L 14301846 14301858 7 107 17.0 0.0 8.5 0.7 115 chr2L 14301743 intron wb + chr2L 14301800 intron wb + chr2L 14301858 intron wb + chr2L_7_14300001 chr2L_14300001 RAL-307_100b 599 chr2L 14340504 14340520 chr2L 14340605 14340615 13 99 11.5 10.5 11.0 1.1 111 chr2L 14340504 intron CG33090 + chr2L 14340560 intron CG33090 + chr2L 14340615 intron CG33090 + chr2L_13_14340001 chr2L_14340001 RAL-307_100b 600 chr2L 14374767 14374772 chr2L 14374883 14374888 5 116 27.0 23.5 25.2 0.2 121 chr2L 14374767 intergenic not near genes chr2L 14374828 intergenic not near genes chr2L 14374888 intergenic not near genes chr2L_5_14370001 chr2L_14370001 RAL-307_100b 601 chr2L 14374773 14374802 chr2L 14374873 14374918 27 114 13.5 19.0 16.2 1.6 145 chr2L 14374773 intergenic not near genes chr2L 14374846 intergenic not near genes chr2L 14374918 intergenic not near genes chr2L_27_14370001 chr2L_14370001 RAL-307_100b 602 chr2L 14503409 14503431 chr2L 14503513 14503535 20 103 15.0 12.0 13.5 1.4 126 chr2L 14503409 intergenic not near genes chr2L 14503472 intergenic not near genes chr2L 14503535 intergenic not near genes chr2L_20_14500001 chr2L_14500001 RAL-307_100b 603 chr2L 14549126 14549179 chr2L 14549227 14549280 64 99 15.5 10.0 12.8 4.6 154 chr2L 14549126 intergenic CG4218 - chr2L 14549203 intergenic CG4218 - chr2L 14549280 intergenic CG4218 - chr2L_64_14545001 chr2L_14545001 RAL-307_100b 604 chr2L 14560624 14560634 chr2L 14560732 14560742 6 108 22.0 27.0 24.5 0.2 118 chr2L 14560624 intergenic CR44855 + chr2L 14560683 intergenic CR44855 + chr2L 14560742 intergenic CR44855 + chr2L_6_14560001 chr2L_14560001 RAL-307_100b 605 chr2L 14570695 14570698 chr2L 14570801 14570804 5 106 19.5 1.5 10.5 0.4 109 chr2L 14570695 intergenic not near genes chr2L 14570750 intergenic not near genes chr2L 14570804 intergenic not near genes chr2L_5_14570001 chr2L_14570001 RAL-307_100b 606 chr2L 14601951 14602003 chr2L 14602060 14602108 57 106 13.0 10.5 11.8 4.5 157 chr2L 14601951 exon osp - chr2L 14602030 intron osp - chr2L 14602108 intron osp - chr2L_57_14600001 chr2L_14600001 RAL-307_100b 607 chr2L 14621349 14621405 chr2L 14621474 14621530 54 121 14.5 13.5 14.0 3.6 181 chr2L 14621349 intron osp - chr2L 14621440 intron osp - chr2L 14621530 intron osp - chr2L_54_14620001 chr2L_14620001 RAL-307_100b 608 chr2L 14624528 14624557 chr2L 14624632 14624661 11 104 7.5 7.0 7.2 1.3 133 chr2L 14624528 intron osp - chr2L 14624594 intron osp - chr2L 14624661 intron osp - chr2L_11_14620001 chr2L_14620001 RAL-307_100b 609 chr2L 14686266 14686319 chr2L 14686368 14686422 50 100 15.0 9.0 12.0 3.8 156 chr2L 14686266 intron osp - chr2L 14686344 intron osp - chr2L 14686422 intron osp - chr2L_50_14685001 chr2L_14685001 RAL-307_100b 610 chr2L 14694231 14694287 chr2L 14694380 14694435 56 148 9.5 7.5 8.5 5.9 204 chr2L 14694231 intergenic not near genes chr2L 14694333 intergenic not near genes chr2L 14694435 intergenic not near genes chr2L_56_14690001 chr2L_14690001 RAL-307_100b 611 chr2L 14707182 14707240 chr2L 14707326 14707384 87 142 24.0 9.5 16.8 4.9 202 chr2L 14707182 intergenic not near genes chr2L 14707283 intergenic not near genes chr2L 14707384 intergenic not near genes chr2L_87_14705001 chr2L_14705001 RAL-307_100b 612 chr2L 14707571 14707576 chr2L 14708600 14708606 5 1029 24.0 82.0 53.0 0.1 1035 chr2L 14707571 intergenic not near genes chr2L 14708088 intergenic not near genes chr2L 14708606 intergenic not near genes chr2L_5_14705001 chr2L_14705001 RAL-307_100b 613 chr2L 14707577 14707618 chr2L 14708591 14708648 38 1027 39.0 80.5 59.8 0.6 1071 chr2L 14707577 intergenic not near genes chr2L 14708112 intergenic not near genes chr2L 14708648 intergenic not near genes chr2L_38_14705001 chr2L_14705001 RAL-307_100b 614 chr2L 14706734 14706784 chr2L 14708971 14709021 43 2239 112.0 108.0 110.0 0.4 2287 chr2L 14706734 intergenic not near genes chr2L 14707878 intergenic not near genes chr2L 14709021 intergenic not near genes chr2L_43_14705001 chr2L_14705001 RAL-307_100b 615 chr2L 14726556 14726577 chr2L 14726663 14726684 13 107 8.5 22.5 15.5 0.8 128 chr2L 14726556 intron CG42685 - chr2L 14726620 intron CG42685 - chr2L 14726684 intron CG42685 - chr2L_13_14725001 chr2L_14725001 RAL-307_100b 616 chr2L 14747525 14747540 chr2L 14747628 14747652 8 108 18.0 16.0 17.0 0.4 127 chr2L 14747525 intergenic not near genes chr2L 14747588 intergenic not near genes chr2L 14747652 intergenic not near genes chr2L_8_14745001 chr2L_14745001 RAL-307_100b 617 chr2L 14747543 14747551 chr2L 14747619 14747663 8 106 17.5 12.0 14.8 0.5 120 chr2L 14747543 intergenic not near genes chr2L 14747603 intergenic not near genes chr2L 14747663 intergenic not near genes chr2L_8_14745001 chr2L_14745001 RAL-307_100b 618 chr2L 14747553 14747566 chr2L 14747618 14747648 9 99 10.5 10.5 10.5 0.8 95 chr2L 14747553 intergenic not near genes chr2L 14747600 intergenic not near genes chr2L 14747648 intergenic not near genes chr2L_9_14745001 chr2L_14745001 RAL-307_100b 619 chr2L 14778786 14778794 chr2L 14779099 14779107 6 312 32.0 18.0 25.0 0.2 321 chr2L 14778786 intergenic not near genes chr2L 14778946 intergenic not near genes chr2L 14779107 intergenic not near genes chr2L_6_14775001 chr2L_14775001 RAL-307_100b 620 chr2L 14778799 14778839 chr2L 14779093 14779145 34 303 14.0 15.5 14.8 2.2 346 chr2L 14778799 intergenic not near genes chr2L 14778972 intergenic not near genes chr2L 14779145 intergenic not near genes chr2L_34_14775001 chr2L_14775001 RAL-307_100b 621 chr2L 14787112 14787128 chr2L 14787213 14787217 7 99 28.5 0.0 14.2 0.5 105 chr2L 14787112 intergenic not near genes chr2L 14787164 intergenic not near genes chr2L 14787217 intergenic not near genes chr2L_7_14785001 chr2L_14785001 RAL-307_100b 622 chr2L 14803852 14803909 chr2L 14809080 14809137 copia 58 5226 11.0 15.5 13.2 4.1 5285 chr2L 14803852 intergenic not near genes chr2L 14806494 intergenic not near genes chr2L 14809137 intergenic not near genes chr2L_58_14805001 chr2L_14805001 RAL-307_100b 623 chr2L 14833768 14833820 chr2L 14833897 14833949 35 127 8.0 16.5 12.2 2.7 181 chr2L 14833768 intergenic not near genes chr2L 14833858 intergenic not near genes chr2L 14833949 intergenic not near genes chr2L_35_14830001 chr2L_14830001 RAL-307_100b 624 chr2L 14887665 14887703 chr2L 14887768 14887804 33 101 15.5 10.5 13.0 2.4 139 chr2L 14887665 intergenic not near genes chr2L 14887734 intergenic not near genes chr2L 14887804 intergenic not near genes chr2L_33_14885001 chr2L_14885001 RAL-307_100b 625 chr2L 14889927 14889950 chr2L 14890377 14890395 jockey 22 448 26.0 7.5 16.8 1.2 468 chr2L 14889927 intergenic not near genes chr2L 14890161 intergenic not near genes chr2L 14890395 intergenic not near genes chr2L_22_14890001 chr2L_14890001 RAL-307_100b 626 chr2L 14889952 14889987 chr2L 14890376 14890412 jockey 35 446 11.0 7.0 9.0 3.5 460 chr2L 14889952 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890412 intergenic not near genes chr2L_35_14890001 chr2L_14890001 RAL-307_100b 627 chr2L 14950423 14950427 chr2L 14950923 14950926 6 500 48.0 13.0 30.5 0.2 503 chr2L 14950423 intron CG42313 - chr2L 14950674 intron CG42313 - chr2L 14950926 intron CG42313 - chr2L_6_14950001 chr2L_14950001 RAL-307_100b 628 chr2L 14950428 14950480 chr2L 14950922 14950980 64 494 15.0 12.5 13.8 4.3 552 chr2L 14950428 intron CG42313 - chr2L 14950704 intron CG42313 - chr2L 14950980 intron CG42313 - chr2L_64_14950001 chr2L_14950001 RAL-307_100b 629 chr2L 14982114 14982288 chr2L 14982246 14982399 59 119 0.0 0.0 0.0 59.0 285 chr2L 14982114 intron mol - chr2L 14982256 intron mol - chr2L 14982399 intron mol - chr2L_59_14980001 chr2L_14980001 RAL-307_100b 630 chr2L 14983619 14983621 chr2L 15756485 15756486 5 772866 0.0 42.5 21.2 0.2 772867 chr2L 14983619 intron mol - chr2L 15370052 intergenic not near genes chr2L 15756486 3` UTR Gli - chr2L_5_15370001 chr2L_15370001 RAL-307_100b 631 chr2L 14984360 14984405 chr2L 14991987 14992020 opus 28 7623 18.0 10.0 14.0 1.9 7660 chr2L 14984360 intron mol - chr2L 14988190 intron mol - chr2L 14992020 intron mol - chr2L_28_14985001 chr2L_14985001 RAL-307_100b 632 chr2L 15013130 15013181 chr2L 15013259 15013315 26 131 3.5 11.0 7.2 3.2 185 chr2L 15013130 intergenic CR43856 - chr2L 15013222 intergenic not near genes chr2L 15013315 intergenic not near genes chr2L_26_15010001 chr2L_15010001 RAL-307_100b 633 chr2L 15014597 15014650 chr2L 15014700 15014736 22 101 0.5 12.5 6.5 2.9 139 chr2L 15014597 intergenic not near genes chr2L 15014666 intergenic not near genes chr2L 15014736 intergenic not near genes chr2L_22_15010001 chr2L_15010001 RAL-307_100b 634 chr2L 15021388 15021417 chr2L 15021620 15021627 23 230 1.5 9.5 5.5 3.5 239 chr2L 15021388 intron GABA-B-R1 + chr2L 15021508 intron GABA-B-R1 + chr2L 15021627 intron GABA-B-R1 + chr2L_23_15020001 chr2L_15020001 RAL-307_100b 635 chr2L 15031531 15031539 chr2L 15031796 15031804 10 264 42.5 14.0 28.2 0.3 273 chr2L 15031531 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031668 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031804 intron GABA-B-R1 + chr2L_10_15030001 chr2L_15030001 RAL-307_100b 636 chr2L 15031540 15031587 chr2L 15031794 15031852 30 259 11.0 12.5 11.8 2.3 312 chr2L 15031540 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031696 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031852 intron GABA-B-R1 + chr2L_30_15030001 chr2L_15030001 RAL-307_100b 637 chr2L 15044700 15044740 chr2L 15044801 15044820 32 99 7.5 0.0 3.8 6.7 120 chr2L 15044700 intergenic ck - chr2L 15044760 intergenic ck - chr2L 15044820 intergenic ck - chr2L_32_15040001 chr2L_15040001 RAL-307_100b 638 chr2L 15078044 15078098 chr2L 15078157 15078211 57 111 10.0 14.0 12.0 4.4 167 chr2L 15078044 intron CG15270 + chr2L 15078128 intron CG15270 + chr2L 15078211 intron CG15270 + chr2L_57_15075001 chr2L_15075001 RAL-307_100b 639 chr2L 15098515 15098520 chr2L 15098620 15098625 6 105 34.0 19.0 26.5 0.2 110 chr2L 15098515 intergenic not near genes chr2L 15098570 intergenic not near genes chr2L 15098625 intergenic not near genes chr2L_6_15095001 chr2L_15095001 RAL-307_100b 640 chr2L 15098523 15098542 chr2L 15098618 15098647 19 100 24.5 17.0 20.8 0.9 124 chr2L 15098523 intergenic not near genes chr2L 15098585 intergenic not near genes chr2L 15098647 intergenic not near genes chr2L_19_15095001 chr2L_15095001 RAL-307_100b 641 chr2L 15103834 15103866 chr2L 15103956 15103988 29 121 17.0 23.5 20.2 1.4 154 chr2L 15103834 intergenic not near genes chr2L 15103911 intergenic not near genes chr2L 15103988 intergenic not near genes chr2L_29_15100001 chr2L_15100001 RAL-307_100b 642 chr2L 15138960 15139004 chr2L 15139073 15139117 14 113 11.0 0.0 5.5 2.2 157 chr2L 15138960 intergenic not near genes chr2L 15139038 intergenic not near genes chr2L 15139117 intergenic not near genes chr2L_14_15135001 chr2L_15135001 RAL-307_100b 643 chr2L 15161224 15161276 chr2L 15161385 15161437 42 160 9.5 8.0 8.8 4.3 213 chr2L 15161224 intergenic CR44770 + chr2L 15161330 intergenic CR44770 + chr2L 15161437 intergenic CR44770 +,CG4168 - chr2L_42_15160001 chr2L_15160001 RAL-307_100b 644 chr2L 15204279 15204290 chr2L 15204580 15204586 5 303 0.5 23.5 12.0 0.4 307 chr2L 15204279 intergenic CR43357 + chr2L 15204432 intergenic CR43357 + chr2L 15204586 intergenic not near genes chr2L_5_15200001 chr2L_15200001 RAL-307_100b 645 chr2L 15204291 15204312 chr2L 15204568 15204609 19 297 0.5 15.0 7.8 2.2 318 chr2L 15204291 intergenic CR43357 + chr2L 15204450 intergenic CR43357 + chr2L 15204609 intergenic not near genes chr2L_19_15200001 chr2L_15200001 RAL-307_100b 646 chr2L 15226346 15226395 chr2L 15226447 15226484 30 99 11.0 16.5 13.8 2.0 138 chr2L 15226346 intergenic not near genes chr2L 15226415 intergenic not near genes chr2L 15226484 intergenic not near genes chr2L_30_15225001 chr2L_15225001 RAL-307_100b 647 chr2L 15318935 15318981 chr2L 15319036 15319083 10 100 10.5 13.5 12.0 0.8 148 chr2L 15318935 intergenic nht - chr2L 15319009 intergenic nht - chr2L 15319083 intergenic nht - chr2L_10_15315001 chr2L_15315001 RAL-307_100b 648 chr2L 15332212 15332241 chr2L 15332598 15332607 17 379 17.0 0.5 8.8 1.7 395 chr2L 15332212 intergenic not near genes chr2L 15332410 intergenic not near genes chr2L 15332607 intergenic not near genes chr2L_17_15330001 chr2L_15330001 RAL-307_100b 649 chr2L 15343511 15343556 chr2L 15343621 15343646 28 108 14.5 0.0 7.2 3.4 135 chr2L 15343511 intergenic not near genes chr2L 15343578 intergenic not near genes chr2L 15343646 intergenic not near genes chr2L_28_15340001 chr2L_15340001 RAL-307_100b 650 chr2L 15347352 15347356 chr2L 15347456 15347459 5 104 12.5 42.5 27.5 0.2 107 chr2L 15347352 intergenic not near genes chr2L 15347406 intergenic not near genes chr2L 15347459 intergenic not near genes chr2L_5_15345001 chr2L_15345001 RAL-307_100b 651 chr2L 15352944 15352999 chr2L 15353045 15353095 52 99 15.0 18.5 16.8 2.9 151 chr2L 15352944 intergenic not near genes chr2L 15353020 intergenic not near genes chr2L 15353095 intergenic not near genes chr2L_52_15350001 chr2L_15350001 RAL-307_100b 652 chr2L 15371561 15371570 chr2L 15371804 15371813 8 243 38.5 9.5 24.0 0.3 252 chr2L 15371561 intergenic not near genes chr2L 15371687 intergenic not near genes chr2L 15371813 intergenic not near genes chr2L_8_15370001 chr2L_15370001 RAL-307_100b 653 chr2L 15371572 15371619 chr2L 15371803 15371862 52 238 10.5 9.5 10.0 4.7 290 chr2L 15371572 intergenic not near genes chr2L 15371717 intergenic not near genes chr2L 15371862 intergenic not near genes chr2L_52_15370001 chr2L_15370001 RAL-307_100b 654 chr2L 15375799 15375845 chr2L 15375936 15375982 33 136 3.5 10.0 6.8 4.2 183 chr2L 15375799 intergenic not near genes chr2L 15375890 intergenic not near genes chr2L 15375982 intergenic not near genes chr2L_33_15375001 chr2L_15375001 RAL-307_100b 655 chr2L 15446026 15446030 chr2L 15453520 15453524 blood 4 7494 37.0 5.0 21.0 0.2 7498 chr2L 15446026 intergenic not near genes chr2L 15449775 intergenic not near genes chr2L 15453524 intergenic not near genes chr2L_4_15445001 chr2L_15445001 RAL-307_100b 656 chr2L 15446034 15446079 chr2L 15453519 15453573 blood 34 7491 11.5 5.0 8.2 3.7 7539 chr2L 15446034 intergenic not near genes chr2L 15449804 intergenic not near genes chr2L 15453573 intergenic not near genes chr2L_34_15445001 chr2L_15445001 RAL-307_100b 657 chr2L 15458252 15458278 chr2L 15458365 15458391 19 112 15.0 16.5 15.8 1.1 139 chr2L 15458252 intergenic not near genes chr2L 15458322 intergenic not near genes chr2L 15458391 intergenic not near genes chr2L_19_15455001 chr2L_15455001 RAL-307_100b 658 chr2L 15488521 15488534 chr2L 15488624 15488637 12 103 12.5 24.0 18.2 0.6 116 chr2L 15488521 intergenic not near genes chr2L 15488579 intergenic not near genes chr2L 15488637 intergenic not near genes chr2L_12_15485001 chr2L_15485001 RAL-307_100b 659 chr2L 15488535 15488575 chr2L 15488623 15488676 38 99 12.0 23.5 17.8 2.0 141 chr2L 15488535 intergenic not near genes chr2L 15488606 intergenic not near genes chr2L 15488676 intergenic not near genes chr2L_38_15485001 chr2L_15485001 RAL-307_100b 660 chr2L 15490028 15490040 chr2L 15490133 15490141 9 105 0.0 13.5 6.8 1.2 113 chr2L 15490028 intergenic not near genes chr2L 15490084 intergenic not near genes chr2L 15490141 intergenic not near genes chr2L_9_15490001 chr2L_15490001 RAL-307_100b 661 chr2L 15514298 15514309 chr2L 15514407 15514418 7 109 28.0 28.0 28.0 0.2 120 chr2L 15514298 intergenic not near genes chr2L 15514358 intergenic not near genes chr2L 15514418 intergenic not near genes chr2L_7_15510001 chr2L_15510001 RAL-307_100b 662 chr2L 15514310 15514333 chr2L 15514404 15514414 18 102 19.5 25.5 22.5 0.8 104 chr2L 15514310 intergenic not near genes chr2L 15514362 intergenic not near genes chr2L 15514414 intergenic not near genes chr2L_18_15510001 chr2L_15510001 RAL-307_100b 663 chr2L 15586386 15586438 chr2L 15593463 15593515 297 42 7076 12.5 18.5 15.5 2.5 7129 chr2L 15586386 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593515 intergenic not near genes chr2L_42_15585001 chr2L_15585001 RAL-307_100b 664 chr2L 15598743 15598796 chr2L 15598847 15598899 30 101 14.5 2.0 8.2 3.3 156 chr2L 15598743 intergenic not near genes chr2L 15598821 intergenic not near genes chr2L 15598899 intergenic not near genes chr2L_30_15595001 chr2L_15595001 RAL-307_100b 665 chr2L 15736954 15736971 chr2L 15737064 15737081 9 110 29.5 16.5 23.0 0.4 127 chr2L 15736954 intron CycE - chr2L 15737018 intron CycE - chr2L 15737081 intron CycE - chr2L_9_15735001 chr2L_15735001 RAL-307_100b 666 chr2L 15736973 15737003 chr2L 15737060 15737103 30 107 16.0 14.5 15.2 1.9 130 chr2L 15736973 intron CycE - chr2L 15737038 intron CycE - chr2L 15737103 intron CycE - chr2L_30_15735001 chr2L_15735001 RAL-307_100b 667 chr2L 15750009 15750016 chr2L 15750147 15750149 4 137 8.0 0.0 4.0 0.8 140 chr2L 15750009 intron l(2)35Di - chr2L 15750079 intron l(2)35Di - chr2L 15750149 intron l(2)35Di - chr2L_4_15750001 chr2L_15750001 RAL-307_100b 668 chr2L 15823326 15823371 chr2L 15823427 15823472 37 97 13.0 9.5 11.2 3.0 146 chr2L 15823326 intergenic CR44601 - chr2L 15823399 intergenic CR44601 - chr2L 15823472 intergenic not near genes chr2L_37_15820001 chr2L_15820001 RAL-307_100b 669 chr2L 15826870 15826893 chr2L 15829289 15829306 Tabor 27 2419 12.0 28.0 20.0 1.3 2436 chr2L 15826870 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829306 intergenic not near genes chr2L_27_15825001 chr2L_15825001 RAL-307_100b 670 chr2L 15871259 15871288 chr2L 15871367 15871396 28 106 26.5 13.5 20.0 1.3 137 chr2L 15871259 intergenic not near genes chr2L 15871328 intergenic not near genes chr2L 15871396 intergenic not near genes chr2L_28_15870001 chr2L_15870001 RAL-307_100b 671 chr2L 15871293 15871316 chr2L 15871366 15871424 24 106 8.5 13.5 11.0 2.0 131 chr2L 15871293 intergenic not near genes chr2L 15871358 intergenic not near genes chr2L 15871424 intergenic not near genes chr2L_24_15870001 chr2L_15870001 RAL-307_100b 672 chr2L 15933547 15933604 chr2L 15936110 15936147 56 2560 69.5 62.5 66.0 0.8 2600 chr2L 15933547 intron beat-Ib - chr2L 15934847 intron beat-Ib - chr2L 15936147 intron beat-Ib - chr2L_56_15930001 chr2L_15930001 RAL-307_100b 673 chr2L 15933220 15933224 chr2L 15936100 15936104 9 2880 94.0 59.5 76.8 0.1 2884 chr2L 15933220 intron beat-Ib - chr2L 15934662 intron beat-Ib - chr2L 15936104 intron beat-Ib - chr2L_9_15930001 chr2L_15930001 RAL-307_100b 674 chr2L 15933217 15933270 chr2L 15936105 15936150 44 2882 108.5 59.5 84.0 0.5 2933 chr2L 15933217 intron beat-Ib - chr2L 15934684 intron beat-Ib - chr2L 15936150 intron beat-Ib - chr2L_44_15930001 chr2L_15930001 RAL-307_100b 675 chr2L 15955998 15956058 chr2L 15957490 15957515 hobo 41 1484 16.5 14.0 15.2 2.5 1517 chr2L 15955998 intron beat-Ib - chr2L 15956756 intron beat-Ib - chr2L 15957515 intron beat-Ib - chr2L_41_15955001 chr2L_15955001 RAL-307_100b 676 chr2L 16001441 16001458 chr2L 16001554 16001570 18 112 0.0 9.0 4.5 3.3 129 chr2L 16001441 intron beat-Ic + chr2L 16001506 intron beat-Ic + chr2L 16001570 intron beat-Ic + chr2L_18_16000001 chr2L_16000001 RAL-307_100b 677 chr2L 16001460 16001494 chr2L 16001553 16001607 29 110 0.0 8.5 4.2 5.6 147 chr2L 16001460 intron beat-Ic + chr2L 16001534 intron beat-Ic + chr2L 16001607 intron beat-Ic + chr2L_29_16000001 chr2L_16000001 RAL-307_100b 678 chr2L 16008679 16008691 chr2L 16008805 16008817 4 124 3.0 5.5 4.2 0.8 138 chr2L 16008679 intron beat-Ic + chr2L 16008748 intron beat-Ic + chr2L 16008817 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-307_100b 679 chr2L 16012099 16012145 chr2L 16012204 16012248 20 104 7.5 12.0 9.8 1.9 149 chr2L 16012099 intron beat-Ic + chr2L 16012174 intron beat-Ic + chr2L 16012248 intron beat-Ic + chr2L_20_16010001 chr2L_16010001 RAL-307_100b 680 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 22 145889 65.0 81.5 73.2 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_22_16140001 chr2L_16140001 RAL-307_100b 681 chr2L 16141142 16141159 chr2L 16146374 16146391 copia 12 5232 30.5 14.0 22.2 0.5 5249 chr2L 16141142 intergenic not near genes chr2L 16143766 intergenic not near genes chr2L 16146391 intergenic not near genes chr2L_12_16140001 chr2L_16140001 RAL-307_100b 682 chr2L 16141160 16141169 chr2L 16146372 16146401 copia 6 5226 27.5 13.5 20.5 0.3 5241 chr2L 16141160 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146401 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-307_100b 683 chr2L 16141172 16141195 chr2L 16146369 16146422 copia 17 5229 12.5 12.0 12.2 1.3 5250 chr2L 16141172 intergenic not near genes chr2L 16143797 intergenic not near genes chr2L 16146422 intergenic not near genes chr2L_17_16140001 chr2L_16140001 RAL-307_100b 684 chr2L 16153718 16153761 chr2L 16160811 16160854 297 35 7091 13.0 17.0 15.0 2.2 7136 chr2L 16153718 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160854 intergenic not near genes chr2L_35_16155001 chr2L_16155001 RAL-307_100b 685 chr2L 9084339 9084340 chr2L 16217660 16217660 7 7133320 66.5 81.5 74.0 0.1 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_12650001 chr2L_12650001 RAL-307_100b 686 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 65.0 81.5 73.2 0.1 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-307_100b 687 chr2L 16225386 16225389 chr2L 16225489 16225500 5 109 24.0 42.5 33.2 0.1 114 chr2L 16225386 intergenic not near genes chr2L 16225443 intergenic not near genes chr2L 16225500 intergenic not near genes chr2L_5_16225001 chr2L_16225001 RAL-307_100b 688 chr2L 16225390 16225393 chr2L 16225446 16225499 8 92 18.5 17.5 18.0 0.4 109 chr2L 16225390 intergenic not near genes chr2L 16225444 intergenic not near genes chr2L 16225499 intergenic not near genes chr2L_8_16225001 chr2L_16225001 RAL-307_100b 689 chr2L 16233637 16233652 chr2L 16233739 16233749 5 96 30.0 13.0 21.5 0.2 112 chr2L 16233637 intron CG42817 + chr2L 16233693 intron CG42817 + chr2L 16233749 intron CG42817 + chr2L_5_16230001 chr2L_16230001 RAL-307_100b 690 chr2L 16233653 16233692 chr2L 16233738 16233794 31 99 16.5 14.0 15.2 1.9 141 chr2L 16233653 intron CG42817 + chr2L 16233724 intron CG42817 + chr2L 16233794 intron CG42817 + chr2L_31_16230001 chr2L_16230001 RAL-307_100b 691 chr2L 16241611 16241649 chr2L 16241714 16241752 8 102 0.0 8.5 4.2 1.5 141 chr2L 16241611 intergenic CG42817 +,CG42818 + chr2L 16241682 intergenic CG42817 +,CG42818 + chr2L 16241752 intergenic CG42818 +,CG42817 + chr2L_8_16240001 chr2L_16240001 RAL-307_100b 692 chr2L 16242048 16242090 chr2L 16242165 16242207 20 115 8.0 1.0 4.5 3.6 159 chr2L 16242048 5` UTR CG42818 + chr2L 16242128 exon CG42818 + chr2L 16242207 exon CG42818 + chr2L_20_16240001 chr2L_16240001 RAL-307_100b 693 chr2L 16243679 16243687 chr2L 16243780 16243795 8 107 0.5 18.5 9.5 0.8 116 chr2L 16243679 exon CG42818 + chr2L 16243737 exon CG42818 + chr2L 16243795 exon CG42818 + chr2L_8_16240001 chr2L_16240001 RAL-307_100b 694 chr2L 16243688 16243694 chr2L 16243778 16243801 7 100 0.5 17.0 8.8 0.7 113 chr2L 16243688 exon CG42818 + chr2L 16243744 exon CG42818 + chr2L 16243801 exon CG42818 + chr2L_7_16240001 chr2L_16240001 RAL-307_100b 695 chr2L 16243696 16243707 chr2L 16243776 16243814 9 99 0.5 16.0 8.2 1.0 118 chr2L 16243696 exon CG42818 + chr2L 16243755 exon CG42818 + chr2L 16243814 exon CG42818 + chr2L_9_16240001 chr2L_16240001 RAL-307_100b 696 chr2L 16254867 16254916 chr2L 16255151 16255197 27 283 11.5 19.0 15.2 1.7 330 chr2L 16254867 intron PRL-1 - chr2L 16255032 intron PRL-1 - chr2L 16255197 intron PRL-1 - chr2L_27_16255001 chr2L_16255001 RAL-307_100b 697 chr2L 16280237 16280285 chr2L 16281431 16281481 1360 47 1194 17.5 21.0 19.2 2.3 1244 chr2L 16280237 intron crp - chr2L 16280859 intron crp - chr2L 16281481 intron crp - chr2L_47_16280001 chr2L_16280001 RAL-307_100b 698 chr2L 16354758 16354786 chr2L 16354870 16354903 30 117 8.5 13.0 10.8 2.5 145 chr2L 16354758 intergenic CaBP1 -,CG4455 + chr2L 16354830 intergenic CaBP1 -,CG4455 + chr2L 16354903 3` UTR CaBP1 - chr2L_30_16350001 chr2L_16350001 RAL-307_100b 699 chr2L 16358593 16358634 chr2L 16358693 16358739 10 102 0.0 13.5 6.8 1.3 146 chr2L 16358593 intergenic not near genes chr2L 16358666 intergenic not near genes chr2L 16358739 intergenic not near genes chr2L_10_16355001 chr2L_16355001 RAL-307_100b 700 chr2L 16363922 16363964 chr2L 16364188 16364235 34 269 9.5 12.0 10.8 2.9 313 chr2L 16363922 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_34_16360001 chr2L_16360001 RAL-307_100b 701 chr2L 16384469 16384525 chr2L 16384583 16384618 54 109 13.0 14.5 13.8 3.6 149 chr2L 16384469 intergenic not near genes chr2L 16384544 intergenic not near genes chr2L 16384618 intergenic not near genes chr2L_54_16380001 chr2L_16380001 RAL-307_100b 702 chr2L 16386432 16386491 chr2L 16386535 16386594 7 102 0.0 8.5 4.2 1.3 162 chr2L 16386432 intergenic not near genes chr2L 16386513 intergenic not near genes chr2L 16386594 intergenic not near genes chr2L_7_16385001 chr2L_16385001 RAL-307_100b 703 chr2L 16408095 16408154 chr2L 16408227 16408281 19 130 0.0 10.5 5.2 3.1 186 chr2L 16408095 intron CG5888 - chr2L 16408188 intron CG5888 - chr2L 16408281 intron CG5888 - chr2L_19_16405001 chr2L_16405001 RAL-307_100b 704 chr2L 16432475 16432516 chr2L 16432586 16432602 19 104 19.0 0.0 9.5 1.8 127 chr2L 16432475 intron CG5888 - chr2L 16432538 intron CG5888 - chr2L 16432602 intron CG5888 - chr2L_19_16430001 chr2L_16430001 RAL-307_100b 705 chr2L 16467872 16467923 chr2L 16467985 16468032 29 113 10.5 13.0 11.8 2.3 160 chr2L 16467872 intron dac - chr2L 16467952 intron dac - chr2L 16468032 intron dac - chr2L_29_16465001 chr2L_16465001 RAL-307_100b 706 chr2L 16468328 16468331 chr2L 16468441 16468447 4 115 0.0 4.5 2.2 1.2 119 chr2L 16468328 intron dac - chr2L 16468388 intron dac - chr2L 16468447 intron dac - chr2L_4_16465001 chr2L_16465001 RAL-307_100b 707 chr2L 16488043 16488102 chr2L 16488145 16488204 51 98 12.5 14.0 13.2 3.6 161 chr2L 16488043 intergenic CG4580 + chr2L 16488124 intergenic CG4580 + chr2L 16488204 exon CG4580 + chr2L_51_16485001 chr2L_16485001 RAL-307_100b 708 chr2L 16511960 16511996 chr2L 16519112 16519148 HMS-Beagle 20 7152 13.0 9.5 11.2 1.6 7188 chr2L 16511960 intron CG5953 - chr2L 16515554 intron CG5953 - chr2L 16519148 intron CG5953 - chr2L_20_16515001 chr2L_16515001 RAL-307_100b 709 chr2L 16548458 16548484 chr2L 16548605 16548606 5 142 11.0 0.0 5.5 0.8 148 chr2L 16548458 intron CG42389 + chr2L 16548532 intron CG42389 + chr2L 16548606 intron CG42389 + chr2L_5_16545001 chr2L_16545001 RAL-307_100b 710 chr2L 16550626 16550683 chr2L 16550727 16550784 52 100 20.0 17.5 18.8 2.6 158 chr2L 16550626 intron CG42389 + chr2L 16550705 intron CG42389 + chr2L 16550784 intron CG42389 + chr2L_52_16550001 chr2L_16550001 RAL-307_100b 711 chr2L 16573224 16573241 chr2L 16573325 16573329 18 103 38.5 33.5 36.0 0.5 105 chr2L 16573224 intron CG42389 + chr2L 16573276 intron CG42389 + chr2L 16573329 intron CG42389 + chr2L_18_16570001 chr2L_16570001 RAL-307_100b 712 chr2L 16573242 16573262 chr2L 16573324 16573365 28 91 23.5 33.5 28.5 0.9 123 chr2L 16573242 intron CG42389 + chr2L 16573304 intron CG42389 + chr2L 16573365 intron CG42389 + chr2L_28_16570001 chr2L_16570001 RAL-307_100b 713 chr2L 16595684 16595736 chr2L 16596033 16596085 32 347 9.5 11.5 10.5 2.8 401 chr2L 16595684 intron CG42389 + chr2L 16595884 intron CG42389 + chr2L 16596085 intron CG42389 + chr2L_32_16595001 chr2L_16595001 RAL-307_100b 714 chr2L 16627697 16627748 chr2L 16627798 16627849 34 98 8.0 16.0 12.0 2.6 152 chr2L 16627697 intron CG42389 + chr2L 16627773 intron CG42389 + chr2L 16627849 intron CG42389 + chr2L_34_16625001 chr2L_16625001 RAL-307_100b 715 chr2L 16654677 16654699 chr2L 16654795 16654817 21 118 30.0 16.0 23.0 0.9 140 chr2L 16654677 intron CG42389 + chr2L 16654747 intron CG42389 + chr2L 16654817 intron CG42389 + chr2L_21_16650001 chr2L_16650001 RAL-307_100b 716 chr2L 16654701 16654734 chr2L 16654794 16654852 32 112 12.5 16.0 14.2 2.1 151 chr2L 16654701 intron CG42389 + chr2L 16654776 intron CG42389 + chr2L 16654852 intron CG42389 + chr2L_32_16650001 chr2L_16650001 RAL-307_100b 717 chr2L 16670395 16670449 chr2L 16670497 16670530 41 98 10.5 11.0 10.8 3.5 135 chr2L 16670395 intron Trpgamma - chr2L 16670462 intron Trpgamma - chr2L 16670530 intron Trpgamma - chr2L_41_16670001 chr2L_16670001 RAL-307_100b 718 chr2L 16709052 16709104 chr2L 16709161 16709213 61 108 16.0 14.5 15.2 3.8 161 chr2L 16709052 intron CG31808 - chr2L 16709132 intron CG31808 - chr2L 16709213 intron CG31808 - chr2L_61_16705001 chr2L_16705001 RAL-307_100b 719 chr2L 16718892 16718995 chr2L 16718995 16719109 9 119 0.0 0.0 0.0 9.0 217 chr2L 16718892 intron Cyt-c-d + chr2L 16719000 intron Cyt-c-d + chr2L 16719109 intron Cyt-c-d + chr2L_9_16715001 chr2L_16715001 RAL-307_100b 720 chr2L 16728897 16728954 chr2L 16729557 16729614 26 658 13.5 12.5 13.0 1.9 717 chr2L 16728897 intergenic not near genes chr2L 16729256 intergenic not near genes chr2L 16729614 intergenic CG31812 + chr2L_26_16725001 chr2L_16725001 RAL-307_100b 721 chr2L 16764946 16765002 chr2L 16765051 16765096 37 103 13.0 13.0 13.0 2.6 150 chr2L 16764946 intergenic not near genes chr2L 16765021 intergenic not near genes chr2L 16765096 intergenic not near genes chr2L_37_16765001 chr2L_16765001 RAL-307_100b 722 chr2L 16796382 16796437 chr2L 16796512 16796549 37 126 16.0 14.0 15.0 2.3 167 chr2L 16796382 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796466 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796549 intergenic Ugt36Bb + chr2L_37_16795001 chr2L_16795001 RAL-307_100b 723 chr2L 16804404 16804421 chr2L 16804515 16804532 16 110 24.0 14.5 19.2 0.8 128 chr2L 16804404 intron CG13280 - chr2L 16804468 intron CG13280 - chr2L 16804532 intron CG13280 - chr2L_16_16800001 chr2L_16800001 RAL-307_100b 724 chr2L 16804422 16804444 chr2L 16804514 16804555 22 107 11.0 14.0 12.5 1.6 133 chr2L 16804422 intron CG13280 - chr2L 16804488 intron CG13280 - chr2L 16804555 intron CG13280 - chr2L_22_16800001 chr2L_16800001 RAL-307_100b 725 chr2L 16847775 16847898 chr2L 16853065 16853120 7 5262 23.0 3.5 13.2 0.5 5345 chr2L 16847775 intron CG13284 - chr2L 16850448 intron CG31810 - chr2L 16853120 intergenic CG31809 - chr2L_7_16850001 chr2L_16850001 RAL-307_100b 726 chr2L 16852407 16852420 chr2L 16852510 16852523 10 103 61.0 2.0 31.5 0.3 116 chr2L 16852407 intergenic CG31810 - chr2L 16852465 intergenic CG31810 - chr2L 16852523 intergenic CG31810 - chr2L_10_16850001 chr2L_16850001 RAL-307_100b 727 chr2L 16852421 16852466 chr2L 16852509 16852569 27 99 20.5 2.0 11.2 2.2 148 chr2L 16852421 intergenic CG31810 - chr2L 16852495 intergenic CG31810 - chr2L 16852569 intergenic CG31810 - chr2L_27_16850001 chr2L_16850001 RAL-307_100b 728 chr2L 16848648 16848664 chr2L 16853281 16853297 10 4634 75.5 26.0 50.8 0.2 4649 chr2L 16848648 5` UTR CG13284 - chr2L 16850972 intron CG31810 - chr2L 16853297 intergenic CG31809 - chr2L_10_16850001 chr2L_16850001 RAL-307_100b 729 chr2L 4894710 4894712 chr2L 16859087 16859089 297 5 11964377 12.5 30.5 21.5 0.2 11964379 chr2L 4894710 intron CG3036 + chr2L 10876900 intergenic not near genes chr2L 16859089 intergenic CG31809 - chr2L_5_10875001 chr2L_10875001 RAL-307_100b 730 chr2L 16867000 16867036 chr2L 16867120 16867156 39 118 1.5 10.5 6.0 5.6 156 chr2L 16867000 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867156 intergenic not near genes chr2L_39_16865001 chr2L_16865001 RAL-307_100b 731 chr2L 16880837 16880845 chr2L 16880944 16880952 11 107 11.0 26.5 18.8 0.6 115 chr2L 16880837 intron,intron CG31743 +,CG34313 + chr2L 16880894 intron,intron CG31743 +,CG34313 + chr2L 16880952 intron,intron CG31743 +,CG34313 + chr2L_11_16880001 chr2L_16880001 RAL-307_100b 732 chr2L 16939983 16940015 chr2L 16940076 16940118 19 98 12.5 19.5 16.0 1.1 135 chr2L 16939983 intergenic not near genes chr2L 16940050 intergenic not near genes chr2L 16940118 intergenic not near genes chr2L_19_16940001 chr2L_16940001 RAL-307_100b 733 chr2L 16958085 16958134 chr2L 16962893 16962947 Doc 37 4811 11.0 15.0 13.0 2.6 4862 chr2L 16958085 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962947 intergenic not near genes chr2L_37_16960001 chr2L_16960001 RAL-307_100b 734 chr2L 17032477 17032523 chr2L 17032587 17032633 39 108 10.5 9.0 9.8 3.6 156 chr2L 17032477 intergenic not near genes chr2L 17032555 intergenic not near genes chr2L 17032633 intergenic not near genes chr2L_39_17030001 chr2L_17030001 RAL-307_100b 735 chr2L 17050010 17050027 chr2L 17050121 17050139 9 112 21.5 21.0 21.2 0.4 129 chr2L 17050010 intergenic not near genes chr2L 17050074 intergenic not near genes chr2L 17050139 intergenic not near genes chr2L_9_17050001 chr2L_17050001 RAL-307_100b 736 chr2L 17050028 17050049 chr2L 17050106 17050150 15 94 11.5 14.5 13.0 1.1 122 chr2L 17050028 intergenic not near genes chr2L 17050089 intergenic not near genes chr2L 17050150 intergenic not near genes chr2L_15_17050001 chr2L_17050001 RAL-307_100b 737 chr2L 17056720 17056768 chr2L 17056825 17056873 23 104 9.5 3.5 6.5 3.1 153 chr2L 17056720 intergenic not near genes chr2L 17056796 intergenic not near genes chr2L 17056873 intergenic not near genes chr2L_23_17055001 chr2L_17055001 RAL-307_100b 738 chr2L 17070173 17070220 chr2L 17070294 17070300 28 115 13.5 11.5 12.5 2.1 127 chr2L 17070173 intergenic not near genes chr2L 17070236 intergenic not near genes chr2L 17070300 intergenic not near genes chr2L_28_17070001 chr2L_17070001 RAL-307_100b 739 chr2L 17082874 17082908 chr2L 17083261 17083295 29 386 9.5 10.0 9.8 2.7 421 chr2L 17082874 intergenic not near genes chr2L 17083084 intergenic not near genes chr2L 17083295 intergenic not near genes chr2L_29_17080001 chr2L_17080001 RAL-307_100b 740 chr2L 17087363 17087383 chr2L 17087501 17087526 10 138 23.0 15.5 19.2 0.5 163 chr2L 17087363 intergenic CG12620 + chr2L 17087444 intergenic CG12620 + chr2L 17087526 intergenic CG12620 + chr2L_10_17085001 chr2L_17085001 RAL-307_100b 741 chr2L 17087384 17087402 chr2L 17087497 17087545 26 137 15.0 15.0 15.0 1.6 161 chr2L 17087384 intergenic CG12620 + chr2L 17087464 intergenic CG12620 + chr2L 17087545 intergenic CG12620 + chr2L_26_17085001 chr2L_17085001 RAL-307_100b 742 chr2L 17089471 17089538 chr2L 17089690 17089743 25 204 0.0 5.5 2.8 6.6 272 chr2L 17089471 intergenic CG12620 + chr2L 17089607 intergenic CG12620 + chr2L 17089743 intergenic not near genes chr2L_25_17085001 chr2L_17085001 RAL-307_100b 743 chr2L 17101018 17101075 chr2L 17101522 17101580 30 507 85.0 87.5 86.2 0.3 562 chr2L 17101018 intergenic not near genes chr2L 17101299 intergenic not near genes chr2L 17101580 intergenic not near genes chr2L_30_17100001 chr2L_17100001 RAL-307_100b 744 chr2L 17108243 17108275 chr2L 17108391 17108423 18 147 9.0 13.5 11.2 1.5 180 chr2L 17108243 intergenic not near genes chr2L 17108333 intergenic not near genes chr2L 17108423 intergenic not near genes chr2L_18_17105001 chr2L_17105001 RAL-307_100b 745 chr2L 17167543 17167596 chr2L 17167809 17167862 pogo 32 265 12.5 11.5 12.0 2.5 319 chr2L 17167543 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167862 intron,intron CG34106 +,beat-IIIa + chr2L_32_17165001 chr2L_17165001 RAL-307_100b 746 chr2L 17168169 17168227 chr2L 17168972 17169030 43 801 10.0 14.0 12.0 3.3 861 chr2L 17168169 intron,intron CG34106 +,beat-IIIa + chr2L 17168600 intron,intron CG34106 +,beat-IIIa + chr2L 17169030 intron,intron CG34106 +,beat-IIIa + chr2L_43_17165001 chr2L_17165001 RAL-307_100b 747 chr2L 17193855 17193870 chr2L 17193967 17193979 5 111 0.0 1.5 0.8 2.8 124 chr2L 17193855 intron beat-IIIc - chr2L 17193917 intron beat-IIIc - chr2L 17193979 intron beat-IIIc - chr2L_5_17190001 chr2L_17190001 RAL-307_100b 748 chr2L 17199141 17199191 chr2L 17200633 17200683 hobo 33 1491 9.0 8.0 8.5 3.5 1542 chr2L 17199141 intron beat-IIIc - chr2L 17199912 intron beat-IIIc - chr2L 17200683 intron beat-IIIc - chr2L_33_17195001 chr2L_17195001 RAL-307_100b 749 chr2L 17214958 17215004 chr2L 17215063 17215108 34 104 6.0 7.0 6.5 4.5 150 chr2L 17214958 intron beat-IIIc - chr2L 17215033 intron beat-IIIc - chr2L 17215108 intron beat-IIIc - chr2L_34_17215001 chr2L_17215001 RAL-307_100b 750 chr2L 17238808 17238828 chr2L 17238918 17238938 16 109 20.5 10.0 15.2 1.0 130 chr2L 17238808 intron beat-IIIc - chr2L 17238873 intron beat-IIIc - chr2L 17238938 intron beat-IIIc - chr2L_16_17235001 chr2L_17235001 RAL-307_100b 751 chr2L 17238830 17238863 chr2L 17238915 17238967 23 103 8.0 9.5 8.8 2.3 137 chr2L 17238830 intron beat-IIIc - chr2L 17238898 intron beat-IIIc - chr2L 17238967 intron beat-IIIc - chr2L_23_17235001 chr2L_17235001 RAL-307_100b 752 chr2L 17240544 17240570 chr2L 17240656 17240682 16 112 19.0 10.5 14.8 1.0 138 chr2L 17240544 intron beat-IIIc - chr2L 17240613 intron beat-IIIc - chr2L 17240682 intron beat-IIIc - chr2L_16_17240001 chr2L_17240001 RAL-307_100b 753 chr2L 17240571 17240595 chr2L 17240655 17240707 18 105 8.5 10.5 9.5 1.7 136 chr2L 17240571 intron beat-IIIc - chr2L 17240639 intron beat-IIIc - chr2L 17240707 intron beat-IIIc - chr2L_18_17240001 chr2L_17240001 RAL-307_100b 754 chr2L 17243907 17243914 chr2L 17244140 17244147 5 233 28.0 9.5 18.8 0.3 240 chr2L 17243907 intron beat-IIIc - chr2L 17244027 intron beat-IIIc - chr2L 17244147 intron beat-IIIc - chr2L_5_17240001 chr2L_17240001 RAL-307_100b 755 chr2L 17243917 17243946 chr2L 17244137 17244179 26 232 16.5 8.0 12.2 2.0 262 chr2L 17243917 intron beat-IIIc - chr2L 17244048 intron beat-IIIc - chr2L 17244179 intron beat-IIIc - chr2L_26_17240001 chr2L_17240001 RAL-307_100b 756 chr2L 17273175 17273212 chr2L 17277983 17278020 F-element 34 4805 21.5 18.0 19.8 1.6 4845 chr2L 17273175 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278020 intergenic not near genes chr2L_34_17275001 chr2L_17275001 RAL-307_100b 757 chr2L 17273214 17273223 chr2L 17277973 17277999 F-element 15 4793 16.5 13.0 14.8 0.9 4785 chr2L 17273214 intergenic not near genes chr2L 17275606 intergenic not near genes chr2L 17277999 intergenic not near genes chr2L_15_17275001 chr2L_17275001 RAL-307_100b 758 chr2L 17327892 17327928 chr2L 17328003 17328039 39 108 17.5 19.5 18.5 2.0 147 chr2L 17327892 intergenic not near genes chr2L 17327966 intergenic not near genes chr2L 17328039 intergenic not near genes chr2L_39_17325001 chr2L_17325001 RAL-307_100b 759 chr2L 17344855 17344908 chr2L 17344957 17344996 53 99 10.0 15.0 12.5 3.9 141 chr2L 17344855 intergenic not near genes chr2L 17344926 intergenic not near genes chr2L 17344996 intergenic not near genes chr2L_53_17340001 chr2L_17340001 RAL-307_100b 760 chr2L 17359998 17360040 chr2L 17360201 17360243 34 201 16.0 2.0 9.0 3.4 245 chr2L 17359998 intergenic not near genes chr2L 17360120 intergenic not near genes chr2L 17360243 intergenic not near genes chr2L_34_17360001 chr2L_17360001 RAL-307_100b 761 chr2L 17379689 17379702 chr2L 17379799 17379812 11 110 12.5 19.0 15.8 0.7 123 chr2L 17379689 intron Lrch - chr2L 17379750 intron Lrch - chr2L 17379812 intron Lrch - chr2L_11_17375001 chr2L_17375001 RAL-307_100b 762 chr2L 17431988 17432040 chr2L 17432122 17432172 1360 19 129 2.5 11.5 7.0 2.4 184 chr2L 17431988 intron Dif - chr2L 17432080 intron Dif - chr2L 17432172 intron Dif - chr2L_19_17430001 chr2L_17430001 RAL-307_100b 763 chr2L 17551313 17551325 chr2L 17551432 17551444 14 118 9.0 0.0 4.5 2.5 131 chr2L 17551313 intergenic not near genes chr2L 17551378 intergenic not near genes chr2L 17551444 intergenic not near genes chr2L_14_17550001 chr2L_17550001 RAL-307_100b 764 chr2L 17571149 17571161 chr2L 17571257 17571269 14 108 0.0 24.5 12.2 1.1 120 chr2L 17571149 intergenic not near genes chr2L 17571209 intergenic not near genes chr2L 17571269 intergenic not near genes chr2L_14_17570001 chr2L_17570001 RAL-307_100b 765 chr2L 17579860 17579914 chr2L 17579963 17580017 40 100 12.5 14.0 13.2 2.8 157 chr2L 17579860 5` UTR CR45698 + chr2L 17579938 5` UTR CR45698 + chr2L 17580017 intergenic CR45698 + chr2L_40_17575001 chr2L_17575001 RAL-307_100b 766 chr2L 17607459 17607475 chr2L 17607582 17607598 19 123 29.0 5.5 17.2 1.0 139 chr2L 17607459 intergenic CR44412 - chr2L 17607528 intergenic CR44412 - chr2L 17607598 intergenic CR44412 - chr2L_19_17605001 chr2L_17605001 RAL-307_100b 767 chr2L 17687492 17687520 chr2L 17692262 17692290 F-element 15 4769 20.0 11.5 15.8 0.9 4798 chr2L 17687492 intron CadN - chr2L 17689891 intron CadN - chr2L 17692290 intron CadN - chr2L_15_17685001 chr2L_17685001 RAL-307_100b 768 chr2L 11173952 11173955 chr2L 17719733 17719736 4 6545781 65.0 22.5 43.8 0.1 6545784 chr2L 11173952 intron Ca-beta - chr2L 14446844 intergenic not near genes chr2L 17719736 intron CadN - chr2L_4_14445001 chr2L_14445001 RAL-307_100b 769 chr2L 17723763 17723802 chr2L 17723881 17723920 31 117 9.5 12.5 11.0 2.6 157 chr2L 17723763 intron CadN - chr2L 17723842 intron CadN - chr2L 17723920 intron CadN - chr2L_31_17720001 chr2L_17720001 RAL-307_100b 770 chr2L 17727852 17727856 chr2L 17729339 17729348 hobo 4 1490 26.0 25.5 25.8 0.1 1496 chr2L 17727852 intron CadN - chr2L 17728600 intron CadN - chr2L 17729348 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-307_100b 771 chr2L 17727857 17727871 chr2L 17729338 17729355 hobo 16 1486 20.0 25.0 22.5 0.7 1498 chr2L 17727857 intron CadN - chr2L 17728606 intron CadN - chr2L 17729355 intron CadN - chr2L_16_17725001 chr2L_17725001 RAL-307_100b 772 chr2L 17727872 17727879 chr2L 17729337 17729348 hobo 7 1481 15.5 24.5 20.0 0.3 1476 chr2L 17727872 intron CadN - chr2L 17728610 intron CadN - chr2L 17729348 intron CadN - chr2L_7_17725001 chr2L_17725001 RAL-307_100b 773 chr2L 17747970 17747974 chr2L 17748072 17748076 6 102 41.0 15.0 28.0 0.2 106 chr2L 17747970 intron CadN - chr2L 17748023 intron CadN - chr2L 17748076 intron CadN - chr2L_6_17745001 chr2L_17745001 RAL-307_100b 774 chr2L 17747977 17748029 chr2L 17748070 17748131 39 94 20.0 16.5 18.2 2.0 154 chr2L 17747977 intron CadN - chr2L 17748054 intron CadN - chr2L 17748131 intron CadN - chr2L_39_17745001 chr2L_17745001 RAL-307_100b 775 chr2L 17819897 17819948 chr2L 17825124 17825176 copia 41 5226 14.5 14.5 14.5 2.6 5279 chr2L 17819897 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825176 intron CadN2 - chr2L_41_17820001 chr2L_17820001 RAL-307_100b 776 chr2L 17867400 17867460 chr2L 17867711 17867761 53 309 16.0 13.5 14.8 3.4 361 chr2L 17867400 intron CadN2 - chr2L 17867580 intron CadN2 - chr2L 17867761 intron CadN2 - chr2L_53_17865001 chr2L_17865001 RAL-307_100b 777 chr2L 17879974 17880031 chr2L 17880086 17880143 40 110 18.5 10.0 14.2 2.6 169 chr2L 17879974 intergenic not near genes chr2L 17880058 intergenic not near genes chr2L 17880143 intergenic not near genes chr2L_40_17880001 chr2L_17880001 RAL-307_100b 778 chr2L 17911942 17911964 chr2L 17914145 17914167 pogo 17 2202 20.5 18.0 19.2 0.8 2225 chr2L 17911942 intergenic not near genes chr2L 17913054 intergenic not near genes chr2L 17914167 intergenic CG43271 - chr2L_17_17910001 chr2L_17910001 RAL-307_100b 779 chr2L 17911965 17911990 chr2L 17914138 17914193 pogo 20 2197 12.5 15.5 14.0 1.3 2228 chr2L 17911965 intergenic not near genes chr2L 17913079 intergenic not near genes chr2L 17914193 intergenic CG43271 - chr2L_20_17910001 chr2L_17910001 RAL-307_100b 780 chr2L 17935502 17935542 chr2L 17935774 17935813 32 269 12.0 20.5 16.2 1.9 311 chr2L 17935502 intergenic not near genes chr2L 17935658 intergenic not near genes chr2L 17935813 intergenic not near genes chr2L_32_17935001 chr2L_17935001 RAL-307_100b 781 chr2L 17944399 17944450 chr2L 17944581 17944632 44 185 12.5 12.0 12.2 3.3 233 chr2L 17944399 intergenic not near genes chr2L 17944516 intergenic not near genes chr2L 17944632 intergenic not near genes chr2L_44_17940001 chr2L_17940001 RAL-307_100b 782 chr2L 17951918 17951978 chr2L 17953410 17953470 hobo 53 1491 11.5 16.0 13.8 3.6 1552 chr2L 17951918 intergenic CR44398 -,CR44397 - chr2L 17952694 intergenic not near genes chr2L 17953470 intergenic not near genes chr2L_53_17950001 chr2L_17950001 RAL-307_100b 783 chr2L 18051856 18051904 chr2L 18061023 18061069 roo 39 9165 15.0 14.5 14.8 2.5 9213 chr2L 18051856 intron rdo + chr2L 18056462 intron rdo + chr2L 18061069 intron rdo + chr2L_39_18055001 chr2L_18055001 RAL-307_100b 784 chr2L 18103019 18103070 chr2L 18103125 18103177 64 107 16.5 17.5 17.0 3.6 158 chr2L 18103019 intergenic not near genes chr2L 18103098 intergenic not near genes chr2L 18103177 intergenic not near genes chr2L_64_18100001 chr2L_18100001 RAL-307_100b 785 chr2L 18148808 18148834 chr2L 18148928 18148955 29 119 27.5 16.5 22.0 1.3 147 chr2L 18148808 intron Socs36E - chr2L 18148882 intron Socs36E - chr2L 18148955 intron Socs36E - chr2L_29_18145001 chr2L_18145001 RAL-307_100b 786 chr2L 18148835 18148848 chr2L 18148924 18148969 18 115 17.5 13.5 15.5 1.1 134 chr2L 18148835 intron Socs36E - chr2L 18148902 intron Socs36E - chr2L 18148969 intron Socs36E - chr2L_18_18145001 chr2L_18145001 RAL-307_100b 787 chr2L 18148851 18148857 chr2L 18148923 18148978 11 108 13.0 13.0 13.0 0.8 127 chr2L 18148851 intron Socs36E - chr2L 18148914 intron Socs36E - chr2L 18148978 intron Socs36E - chr2L_11_18145001 chr2L_18145001 RAL-307_100b 788 chr2L 18254192 18254252 chr2L 18254339 18254379 37 140 12.5 17.0 14.8 2.3 187 chr2L 18254192 intron CG42750 - chr2L 18254286 intron CG42750 - chr2L 18254379 intron CG42750 - chr2L_37_18250001 chr2L_18250001 RAL-307_100b 789 chr2L 18254788 18254841 chr2L 18254913 18254966 44 124 14.0 10.0 12.0 3.4 178 chr2L 18254788 intron CG42750 - chr2L 18254877 intron CG42750 - chr2L 18254966 intron CG42750 - chr2L_44_18250001 chr2L_18250001 RAL-307_100b 790 chr2L 18264035 18264090 chr2L 18264137 18264152 36 99 11.0 14.5 12.8 2.6 117 chr2L 18264035 intron CG42750 - chr2L 18264094 intron CG42750 - chr2L 18264152 intron CG42750 - chr2L_36_18260001 chr2L_18260001 RAL-307_100b 791 chr2L 18274017 18274073 chr2L 18274127 18274169 51 108 9.5 15.0 12.2 3.9 152 chr2L 18274017 intron CG42750 - chr2L 18274093 intron CG42750 - chr2L 18274169 intron CG42750 - chr2L_51_18270001 chr2L_18270001 RAL-307_100b 792 chr2L 18296942 18296949 chr2L 18297039 18297050 5 99 43.5 40.5 42.0 0.1 108 chr2L 18296942 exon CG5790 + chr2L 18296996 exon CG5790 + chr2L 18297050 exon CG5790 + chr2L_5_18295001 chr2L_18295001 RAL-307_100b 793 chr2L 18300247 18300264 chr2L 18300353 18300364 9 104 14.0 56.5 35.2 0.2 117 chr2L 18300247 intergenic not near genes chr2L 18300306 intergenic not near genes chr2L 18300364 intergenic not near genes chr2L_9_18300001 chr2L_18300001 RAL-307_100b 794 chr2L 18303947 18304007 chr2L 18304063 18304113 49 112 10.0 13.0 11.5 3.9 166 chr2L 18303947 intergenic not near genes chr2L 18304030 intergenic not near genes chr2L 18304113 intergenic not near genes chr2L_49_18300001 chr2L_18300001 RAL-307_100b 795 chr2L 18338546 18338597 chr2L 18338675 18338723 18 128 0.0 12.0 6.0 2.6 177 chr2L 18338546 intron Fas3 + chr2L 18338634 intron Fas3 + chr2L 18338723 intron Fas3 + chr2L_18_18335001 chr2L_18335001 RAL-307_100b 796 chr2L 18344797 18344801 chr2L 18344886 18344896 5 92 0.0 27.5 13.8 0.3 99 chr2L 18344797 intron Fas3 + chr2L 18344846 intron Fas3 + chr2L 18344896 intron Fas3 + chr2L_5_18340001 chr2L_18340001 RAL-307_100b 797 chr2L 18344802 18344818 chr2L 18344872 18344919 19 96 2.0 20.5 11.2 1.6 117 chr2L 18344802 intron Fas3 + chr2L 18344860 intron Fas3 + chr2L 18344919 intron Fas3 + chr2L_19_18340001 chr2L_18340001 RAL-307_100b 798 chr2L 18350632 18350681 chr2L 18350744 18350793 43 110 11.5 11.0 11.2 3.5 161 chr2L 18350632 intron Fas3 + chr2L 18350712 intron Fas3 + chr2L 18350793 intron Fas3 + chr2L_43_18350001 chr2L_18350001 RAL-307_100b 799 chr2L 18408004 18408052 chr2L 18412813 18412861 Doc 47 4807 15.0 16.0 15.5 2.8 4857 chr2L 18408004 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412861 intergenic not near genes chr2L_47_18410001 chr2L_18410001 RAL-307_100b 800 chr2L 18561528 18561577 chr2L 18561654 18561703 45 126 11.0 12.0 11.5 3.6 175 chr2L 18561528 intron Pde11 - chr2L 18561616 intron Pde11 - chr2L 18561703 intron Pde11 - chr2L_45_18560001 chr2L_18560001 RAL-307_100b 801 chr2L 18811394 18811435 chr2L 18811501 18811542 27 105 12.5 2.0 7.2 3.3 148 chr2L 18811394 intergenic CG10570 -,CG42502 - chr2L 18811468 intergenic CG10570 -,CG42502 - chr2L 18811542 intergenic not near genes chr2L_27_18810001 chr2L_18810001 RAL-307_100b 802 chr2L 18811642 18811688 chr2L 18811876 18811922 31 231 9.5 15.5 12.5 2.3 280 chr2L 18811642 intergenic not near genes chr2L 18811782 intergenic not near genes chr2L 18811922 intergenic not near genes chr2L_31_18810001 chr2L_18810001 RAL-307_100b 803 chr2L 18812533 18812567 chr2L 18812821 18812855 25 288 4.5 17.5 11.0 2.1 322 chr2L 18812533 intergenic CG17325 +,CG42305 + chr2L 18812694 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812855 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_25_18810001 chr2L_18810001 RAL-307_100b 804 chr2L 18812568 18812589 chr2L 18812819 18812877 20 279 4.5 16.5 10.5 1.7 309 chr2L 18812568 intergenic CG17325 +,CG42305 + chr2L 18812722 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812877 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_20_18810001 chr2L_18810001 RAL-307_100b 805 chr2L 18899197 18899251 chr2L 18899599 18899653 48 392 9.5 18.0 13.8 3.2 456 chr2L 18899197 intergenic CR44739 - chr2L 18899425 intergenic CR44739 - chr2L 18899653 3` UTR CR44739 - chr2L_48_18895001 chr2L_18895001 RAL-307_100b 806 chr2L 18902600 18902602 chr2L 18902906 18902908 4 306 29.5 8.0 18.8 0.2 308 chr2L 18902600 intergenic not near genes chr2L 18902754 intergenic not near genes chr2L 18902908 intergenic not near genes chr2L_4_18900001 chr2L_18900001 RAL-307_100b 807 chr2L 18902604 18902657 chr2L 18902905 18902963 46 304 11.5 8.0 9.8 4.3 359 chr2L 18902604 intergenic not near genes chr2L 18902784 intergenic not near genes chr2L 18902963 intergenic not near genes chr2L_46_18900001 chr2L_18900001 RAL-307_100b 808 chr2L 18955255 18955267 chr2L 18955403 18955404 8 146 0.0 0.0 0.0 8.0 149 chr2L 18955255 intergenic CG10623 -,CR44741 + chr2L 18955330 intergenic CG10623 -,CR44741 + chr2L 18955404 intergenic CG10623 -,CR44741 + chr2L_8_18955001 chr2L_18955001 RAL-307_100b 809 chr2L 18962257 18962259 chr2L 18962354 18962379 6 114 0.0 20.5 10.2 0.5 122 chr2L 18962257 intron Nak - chr2L 18962318 intron Nak - chr2L 18962379 intron Nak - chr2L_6_18960001 chr2L_18960001 RAL-307_100b 810 chr2L 19016216 19016274 chr2L 19016337 19016392 48 119 13.5 12.0 12.8 3.5 176 chr2L 19016216 intergenic not near genes chr2L 19016304 intergenic not near genes chr2L 19016392 intergenic not near genes chr2L_48_19015001 chr2L_19015001 RAL-307_100b 811 chr2L 19024096 19024097 chr2L 21768291 21768291 16 2744194 41.5 67.5 54.5 0.3 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_16_20395001 chr2L_20395001 RAL-307_100b 812 chr2L 19035892 19035910 chr2L 19036007 19036025 12 114 38.0 15.5 26.8 0.4 133 chr2L 19035892 intron mib2 + chr2L 19035958 intron mib2 + chr2L 19036025 intron mib2 + chr2L_12_19035001 chr2L_19035001 RAL-307_100b 813 chr2L 19035913 19035948 chr2L 19036005 19036057 35 105 10.0 14.0 12.0 2.7 144 chr2L 19035913 intron mib2 + chr2L 19035985 intron mib2 + chr2L 19036057 intron mib2 + chr2L_35_19035001 chr2L_19035001 RAL-307_100b 814 chr2L 19043280 19043328 chr2L 19043396 19043446 34 116 19.0 13.5 16.2 2.0 166 chr2L 19043280 exon Catsup + chr2L 19043363 3` UTR Catsup + chr2L 19043446 3` UTR Catsup + chr2L_34_19040001 chr2L_19040001 RAL-307_100b 815 chr2L 19043329 19043335 chr2L 19043394 19043453 6 109 15.0 12.5 13.8 0.4 124 chr2L 19043329 exon Catsup + chr2L 19043391 3` UTR Catsup + chr2L 19043453 3` UTR Catsup + chr2L_6_19040001 chr2L_19040001 RAL-307_100b 816 chr2L 19121015 19121072 chr2L 19121118 19121160 47 98 10.5 8.5 9.5 4.5 145 chr2L 19121015 intergenic l(2)37Cc - chr2L 19121088 intergenic l(2)37Cc - chr2L 19121160 intergenic l(2)37Cc - chr2L_47_19120001 chr2L_19120001 RAL-307_100b 817 chr2L 19145159 19145194 chr2L 19145269 19145277 24 103 28.0 22.0 25.0 0.9 118 chr2L 19145159 intron brat + chr2L 19145218 intron brat + chr2L 19145277 intron brat + chr2L_24_19145001 chr2L_19145001 RAL-307_100b 818 chr2L 19147244 19147277 chr2L 19147384 19147399 16 138 20.5 0.5 10.5 1.4 155 chr2L 19147244 intron brat + chr2L 19147322 intron brat + chr2L 19147399 intron brat + chr2L_16_19145001 chr2L_19145001 RAL-307_100b 819 chr2L 19147281 19147398 chr2L 19154403 19154442 297 27 7092 0.5 14.5 7.5 3.2 7161 chr2L 19147281 intron brat + chr2L 19150862 intron brat + chr2L 19154442 intron brat + chr2L_27_19150001 chr2L_19150001 RAL-307_100b 820 chr2L 19217848 19217855 chr2L 19217957 19217964 7 108 34.0 1.5 17.8 0.4 116 chr2L 19217848 5` UTR CR44189 + chr2L 19217906 5` UTR CR44189 + chr2L 19217964 5` UTR CR44189 + chr2L_7_19215001 chr2L_19215001 RAL-307_100b 821 chr2L 19217856 19217901 chr2L 19217956 19218011 21 103 12.0 1.5 6.8 2.7 155 chr2L 19217856 5` UTR CR44189 + chr2L 19217934 5` UTR CR44189 + chr2L 19218011 5` UTR CR44189 + chr2L_21_19215001 chr2L_19215001 RAL-307_100b 822 chr2L 19220074 19220135 chr2L 19220219 19220275 58 140 16.0 20.5 18.2 3.0 201 chr2L 19220074 intergenic not near genes chr2L 19220174 intergenic not near genes chr2L 19220275 intergenic not near genes chr2L_58_19220001 chr2L_19220001 RAL-307_100b 823 chr2L 19246801 19246852 chr2L 19246906 19246957 50 101 19.5 17.0 18.2 2.6 156 chr2L 19246801 intergenic not near genes chr2L 19246879 intergenic not near genes chr2L 19246957 intergenic not near genes chr2L_50_19245001 chr2L_19245001 RAL-307_100b 824 chr2L 19331650 19331698 chr2L 19331744 19331793 25 94 15.5 14.5 15.0 1.6 143 chr2L 19331650 intergenic not near genes chr2L 19331722 intergenic not near genes chr2L 19331793 intergenic not near genes chr2L_25_19330001 chr2L_19330001 RAL-307_100b 825 chr2L 19345000 19345045 chr2L 19357225 19357262 blood 45 12231 19.5 22.0 20.8 2.1 12262 chr2L 19345000 intron dnt - chr2L 19351131 intron dnt - chr2L 19357262 intron dnt - chr2L_45_19350001 chr2L_19350001 RAL-307_100b 826 chr2L 19357520 19357569 chr2L 19357635 19357684 64 112 20.5 25.5 23.0 2.7 164 chr2L 19357520 intron dnt - chr2L 19357602 intron dnt - chr2L 19357684 intron dnt - chr2L_64_19355001 chr2L_19355001 RAL-307_100b 827 chr2L 19364921 19364924 chr2L 19365108 19365141 4 208 8.5 15.5 12.0 0.3 220 chr2L 19364921 intron CG13086 + chr2L 19365031 exon CG13086 + chr2L 19365141 exon CG13086 + chr2L_4_19365001 chr2L_19365001 RAL-307_100b 828 chr2L 19375445 19375502 chr2L 19375552 19375608 48 104 10.0 11.5 10.8 4.1 163 chr2L 19375445 intergenic not near genes chr2L 19375526 intergenic not near genes chr2L 19375608 intergenic not near genes chr2L_48_19375001 chr2L_19375001 RAL-307_100b 829 chr2L 19405592 19405638 chr2L 19405707 19405753 48 112 14.0 13.5 13.8 3.2 161 chr2L 19405592 intron Pax - chr2L 19405672 intron Pax - chr2L 19405753 intron Pax - chr2L_48_19405001 chr2L_19405001 RAL-307_100b 830 chr2L 19544585 19544592 chr2L 19544672 19544694 10 92 51.0 37.5 44.2 0.2 109 chr2L 19544585 exon ref(2)P + chr2L 19544640 exon ref(2)P + chr2L 19544694 exon ref(2)P + chr2L_10_19540001 chr2L_19540001 RAL-307_100b 831 chr2L 19544594 19544602 chr2L 19544667 19544704 4 84 45.5 38.5 42.0 0.1 110 chr2L 19544594 exon ref(2)P + chr2L 19544649 exon ref(2)P + chr2L 19544704 exon ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-307_100b 832 chr2L 19544607 19544628 chr2L 19544660 19544680 25 67 39.5 41.5 40.5 0.6 73 chr2L 19544607 exon ref(2)P + chr2L 19544644 exon ref(2)P + chr2L 19544680 exon ref(2)P + chr2L_25_19540001 chr2L_19540001 RAL-307_100b 833 chr2L 19557800 19557851 chr2L 19557917 19557962 15 114 5.0 17.0 11.0 1.2 162 chr2L 19557800 intergenic Tep5 + chr2L 19557881 intergenic Tep5 + chr2L 19557962 intergenic Tep5 + chr2L_15_19555001 chr2L_19555001 RAL-307_100b 834 chr2L 19558495 19558549 chr2L 19558624 19558653 43 126 4.5 12.5 8.5 4.5 158 chr2L 19558495 intron Tep5 + chr2L 19558574 intron Tep5 + chr2L 19558653 intron Tep5 + chr2L_43_19555001 chr2L_19555001 RAL-307_100b 835 chr2L 19559405 19559411 chr2L 19559494 19559498 4 93 5.5 0.0 2.8 1.1 93 chr2L 19559405 exon Tep5 + chr2L 19559452 exon Tep5 + chr2L 19559498 exon Tep5 + chr2L_4_19555001 chr2L_19555001 RAL-307_100b 836 chr2L 19559982 19559990 chr2L 19560260 19560268 8 278 41.0 17.5 29.2 0.3 286 chr2L 19559982 exon Tep5 + chr2L 19560125 exon Tep5 + chr2L 19560268 exon Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-307_100b 837 chr2L 19559991 19560039 chr2L 19560259 19560302 45 273 11.0 17.5 14.2 3.0 311 chr2L 19559991 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560302 intron Tep5 + chr2L_45_19560001 chr2L_19560001 RAL-307_100b 838 chr2L 19560815 19560826 chr2L 19560917 19560929 12 104 32.0 0.5 16.2 0.7 114 chr2L 19560815 exon Tep5 + chr2L 19560872 intron Tep5 + chr2L 19560929 exon Tep5 + chr2L_12_19560001 chr2L_19560001 RAL-307_100b 839 chr2L 19560827 19560865 chr2L 19560916 19560952 24 102 12.5 0.5 6.5 3.2 125 chr2L 19560827 intron Tep5 + chr2L 19560890 exon Tep5 + chr2L 19560952 exon Tep5 + chr2L_24_19560001 chr2L_19560001 RAL-307_100b 840 chr2L 19561316 19561338 chr2L 19561484 19561504 10 168 31.5 15.0 23.2 0.4 188 chr2L 19561316 exon Tep5 + chr2L 19561410 exon Tep5 + chr2L 19561504 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-307_100b 841 chr2L 19561339 19561368 chr2L 19561483 19561534 33 164 17.0 14.5 15.8 2.0 195 chr2L 19561339 exon Tep5 + chr2L 19561436 exon Tep5 + chr2L 19561534 exon Tep5 + chr2L_33_19560001 chr2L_19560001 RAL-307_100b 842 chr2L 19562503 19562561 chr2L 19562609 19562666 35 103 0.0 13.0 6.5 4.7 163 chr2L 19562503 exon Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562666 exon Tep5 + chr2L_35_19560001 chr2L_19560001 RAL-307_100b 843 chr2L 19608582 19608609 chr2L 19608698 19608725 20 113 14.0 20.0 17.0 1.1 143 chr2L 19608582 intron Lar + chr2L 19608654 intron Lar + chr2L 19608725 intron Lar + chr2L_20_19605001 chr2L_19605001 RAL-307_100b 844 chr2L 19620070 19620083 chr2L 19621084 19621097 jockey 16 1013 36.5 15.0 25.8 0.6 1027 chr2L 19620070 intron Lar + chr2L 19620584 intron Lar + chr2L 19621097 intron Lar + chr2L_16_19620001 chr2L_19620001 RAL-307_100b 845 chr2L 19620084 19620129 chr2L 19621081 19621124 jockey 59 1008 15.5 13.0 14.2 3.9 1040 chr2L 19620084 intron Lar + chr2L 19620604 intron Lar + chr2L 19621124 intron Lar + chr2L_59_19620001 chr2L_19620001 RAL-307_100b 846 chr2L 19638511 19638570 chr2L 19638624 19638677 43 110 13.0 13.5 13.2 3.0 166 chr2L 19638511 intron Lar + chr2L 19638594 intron Lar + chr2L 19638677 intron Lar + chr2L_43_19635001 chr2L_19635001 RAL-307_100b 847 chr2L 19644086 19644142 chr2L 19644187 19644243 56 96 14.0 9.5 11.8 4.4 157 chr2L 19644086 intron Lar + chr2L 19644164 intron Lar + chr2L 19644243 intron Lar + chr2L_56_19640001 chr2L_19640001 RAL-307_100b 848 chr2L 19652543 19652601 chr2L 19674004 19674059 opus 39 21459 9.0 13.0 11.0 3.2 21516 chr2L 19652543 intron Lar + chr2L 19663301 intron Lar + chr2L 19674059 intron Lar + chr2L_39_19660001 chr2L_19660001 RAL-307_100b 849 chr2L 19703515 19703559 chr2L 19712676 19712720 roo 42 9158 22.0 18.0 20.0 2.0 9205 chr2L 19703515 intron Lar + chr2L 19708118 intron Lar + chr2L 19712720 intron Lar + chr2L_42_19705001 chr2L_19705001 RAL-307_100b 850 chr2L 19703560 19703569 chr2L 19712675 19712695 roo 11 9149 17.0 16.5 16.8 0.6 9135 chr2L 19703560 intron Lar + chr2L 19708128 intron Lar + chr2L 19712695 intron Lar + chr2L_11_19705001 chr2L_19705001 RAL-307_100b 851 chr2L 19718379 19718426 chr2L 19718480 19718513 41 99 15.0 14.5 14.8 2.6 134 chr2L 19718379 intron Lar + chr2L 19718446 intron Lar + chr2L 19718513 intron Lar + chr2L_41_19715001 chr2L_19715001 RAL-307_100b 852 chr2L 19762784 19762840 chr2L 19763049 19763093 pogo 50 264 12.5 11.5 12.0 3.8 309 chr2L 19762784 exon fbp - chr2L 19762938 intron fbp - chr2L 19763093 intron fbp - chr2L_50_19760001 chr2L_19760001 RAL-307_100b 853 chr2L 19776641 19776658 chr2L 19776741 19776763 14 104 29.5 12.0 20.8 0.6 122 chr2L 19776641 3` UTR CdGAPr - chr2L 19776702 3` UTR CdGAPr - chr2L 19776763 3` UTR CdGAPr - chr2L_14_19775001 chr2L_19775001 RAL-307_100b 854 chr2L 19806667 19806675 chr2L 19806771 19806779 7 104 35.0 0.0 17.5 0.4 112 chr2L 19806667 intron sick + chr2L 19806723 intron sick + chr2L 19806779 intron sick + chr2L_7_19805001 chr2L_19805001 RAL-307_100b 855 chr2L 19824387 19824429 chr2L 19824495 19824522 37 105 12.0 17.5 14.8 2.3 135 chr2L 19824387 intron sick + chr2L 19824454 intron sick + chr2L 19824522 intron sick + chr2L_37_19820001 chr2L_19820001 RAL-307_100b 856 chr2L 19837254 19837309 chr2L 19837359 19837383 62 103 18.5 14.0 16.2 3.6 129 chr2L 19837254 intron sick + chr2L 19837318 intron sick + chr2L 19837383 intron sick + chr2L_62_19835001 chr2L_19835001 RAL-307_100b 857 chr2L 19913041 19913083 chr2L 19913512 19913554 41 469 7.5 0.5 4.0 8.2 513 chr2L 19913041 intron,3` UTR sick +,Victoria - chr2L 19913298 intron,exon sick +,Victoria - chr2L 19913554 intron sick + chr2L_41_19910001 chr2L_19910001 RAL-307_100b 858 chr2L 19994629 19994672 chr2L 19994734 19994737 18 89 15.0 21.5 18.2 0.9 108 chr2L 19994629 intron CG43861 - chr2L 19994683 intron CG43861 - chr2L 19994737 intron CG43861 - chr2L_18_19990001 chr2L_19990001 RAL-307_100b 859 chr2L 19994673 19994687 chr2L 19994732 19994759 11 89 15.0 21.0 18.0 0.6 86 chr2L 19994673 intron CG43861 - chr2L 19994716 intron CG43861 - chr2L 19994759 intron CG43861 - chr2L_11_19990001 chr2L_19990001 RAL-307_100b 860 chr2L 20005849 20005899 chr2L 20010950 20010989 flea 50 5099 20.0 18.5 19.2 2.5 5140 chr2L 20005849 intron CG43861 - chr2L 20008419 intron CG43861 - chr2L 20010989 intron CG43861 - chr2L_50_20005001 chr2L_20005001 RAL-307_100b 861 chr2L 20015924 20015982 chr2L 20016072 20016130 73 146 16.0 20.5 18.2 3.8 206 chr2L 20015924 intron CG43861 - chr2L 20016027 intron CG43861 - chr2L 20016130 intron CG43861 - chr2L_73_20015001 chr2L_20015001 RAL-307_100b 862 chr2L 20041406 20041461 chr2L 20041516 20041571 64 105 14.5 24.5 19.5 3.1 165 chr2L 20041406 intron sNPF + chr2L 20041488 intron sNPF + chr2L 20041571 intron sNPF + chr2L_64_20040001 chr2L_20040001 RAL-307_100b 863 chr2L 20057025 20057077 chr2L 20057127 20057179 31 100 11.0 7.5 9.2 3.0 154 chr2L 20057025 intergenic not near genes chr2L 20057102 intergenic not near genes chr2L 20057179 intergenic not near genes chr2L_31_20055001 chr2L_20055001 RAL-307_100b 864 chr2L 20119496 20119509 chr2L 20119597 20119610 10 100 14.5 41.0 27.8 0.3 114 chr2L 20119496 intergenic not near genes chr2L 20119553 intergenic not near genes chr2L 20119610 intergenic not near genes chr2L_10_20115001 chr2L_20115001 RAL-307_100b 865 chr2L 20119510 20119512 chr2L 20119596 20119599 9 90 15.5 40.0 27.8 0.3 89 chr2L 20119510 intergenic not near genes chr2L 20119554 intergenic not near genes chr2L 20119599 intergenic not near genes chr2L_9_20115001 chr2L_20115001 RAL-307_100b 866 chr2L 20272089 20272132 chr2L 20282825 20282868 copia 40 10735 18.5 14.5 16.5 2.3 10779 chr2L 20272089 intergenic not near genes chr2L 20277478 intergenic not near genes chr2L 20282868 intergenic not near genes chr2L_40_20275001 chr2L_20275001 RAL-307_100b 867 chr2L 20272133 20272142 chr2L 20282821 20282878 copia 9 10730 13.5 12.0 12.8 0.7 10745 chr2L 20272133 intergenic not near genes chr2L 20277506 intergenic not near genes chr2L 20282878 intergenic not near genes chr2L_9_20275001 chr2L_20275001 RAL-307_100b 868 chr2L 20296488 20296492 chr2L 20296588 20296598 6 104 0.5 9.5 5.0 1.0 110 chr2L 20296488 intergenic CR43414 - chr2L 20296543 intergenic CR43414 - chr2L 20296598 intergenic CR43414 - chr2L_6_20295001 chr2L_20295001 RAL-307_100b 869 chr2L 20296493 20296539 chr2L 20296587 20296640 39 103 0.0 9.5 4.8 6.7 147 chr2L 20296493 intergenic CR43414 - chr2L 20296566 intergenic CR43414 - chr2L 20296640 intergenic CR43414 - chr2L_39_20295001 chr2L_20295001 RAL-307_100b 870 chr2L 20303134 20303183 chr2L 20310627 20310676 blood 38 7492 16.5 13.5 15.0 2.4 7542 chr2L 20303134 intergenic not near genes chr2L 20306905 intergenic not near genes chr2L 20310676 intergenic not near genes chr2L_38_20305001 chr2L_20305001 RAL-307_100b 871 chr2L 20310874 20310918 chr2L 20310970 20311012 14 99 6.5 21.5 14.0 0.9 138 chr2L 20310874 intergenic spir + chr2L 20310943 intergenic spir + chr2L 20311012 intergenic spir + chr2L_14_20310001 chr2L_20310001 RAL-307_100b 872 chr2L 20372193 20372255 chr2L 20372468 20372521 pogo 30 274 0.0 20.0 10.0 2.7 328 chr2L 20372193 intergenic Ugt37a1 - chr2L 20372357 intergenic Ugt37a1 - chr2L 20372521 exon Ugt37a1 - chr2L_30_20370001 chr2L_20370001 RAL-307_100b 873 chr2L 20474397 20474436 chr2L 20474842 20474881 35 444 8.0 11.0 9.5 3.3 484 chr2L 20474397 intron CR44980 - chr2L 20474639 intron CR44980 - chr2L 20474881 intron CR44980 - chr2L_35_20470001 chr2L_20470001 RAL-307_100b 874 chr2L 20498663 20498708 chr2L 20498787 20498832 51 121 16.0 22.5 19.2 2.5 169 chr2L 20498663 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498832 intergenic not near genes chr2L_51_20495001 chr2L_20495001 RAL-307_100b 875 chr2L 20524164 20524188 chr2L 20524271 20524295 6 107 19.5 0.0 9.8 0.6 131 chr2L 20524164 intergenic not near genes chr2L 20524230 intergenic not near genes chr2L 20524295 intergenic not near genes chr2L_6_20520001 chr2L_20520001 RAL-307_100b 876 chr2L 20533832 20533862 chr2L 20533934 20533964 29 100 14.0 18.0 16.0 1.7 132 chr2L 20533832 intergenic not near genes chr2L 20533898 intergenic not near genes chr2L 20533964 intergenic not near genes chr2L_29_20530001 chr2L_20530001 RAL-307_100b 877 chr2L 20550607 20550617 chr2L 20550718 20550728 10 111 19.0 18.5 18.8 0.5 121 chr2L 20550607 intergenic not near genes chr2L 20550668 intergenic not near genes chr2L 20550728 intergenic not near genes chr2L_10_20550001 chr2L_20550001 RAL-307_100b 878 chr2L 20550618 20550671 chr2L 20550716 20550753 6 95 2.0 16.5 9.2 0.6 135 chr2L 20550618 intergenic not near genes chr2L 20550686 intergenic not near genes chr2L 20550753 intergenic not near genes chr2L_6_20550001 chr2L_20550001 RAL-307_100b 879 chr2L 20553163 20553184 chr2L 20553263 20553285 17 100 26.0 14.5 20.2 0.8 122 chr2L 20553163 intergenic not near genes chr2L 20553224 intergenic not near genes chr2L 20553285 intergenic not near genes chr2L_17_20550001 chr2L_20550001 RAL-307_100b 880 chr2L 20553185 20553221 chr2L 20553260 20553303 32 98 15.5 16.0 15.8 1.9 118 chr2L 20553185 intergenic not near genes chr2L 20553244 intergenic not near genes chr2L 20553303 intergenic not near genes chr2L_32_20550001 chr2L_20550001 RAL-307_100b 881 chr2L 20568635 20568686 chr2L 20569050 20569101 X-element 50 413 14.5 12.5 13.5 3.4 466 chr2L 20568635 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569101 intron CR45347 + chr2L_50_20565001 chr2L_20565001 RAL-307_100b 882 chr2L 20572940 20572961 chr2L 20573050 20573060 25 109 31.5 22.0 26.8 0.9 120 chr2L 20572940 intron CR45347 + chr2L 20573000 intron CR45347 + chr2L 20573060 intron CR45347 + chr2L_25_20570001 chr2L_20570001 RAL-307_100b 883 chr2L 20572962 20572996 chr2L 20573049 20573106 28 106 13.5 21.5 17.5 1.5 144 chr2L 20572962 intron CR45347 + chr2L 20573034 intron CR45347 + chr2L 20573106 intron CR45347 + chr2L_28_20570001 chr2L_20570001 RAL-307_100b 884 chr2L 20576197 20576201 chr2L 20583690 20583691 blood 4 7492 30.5 14.0 22.2 0.2 7494 chr2L 20576197 intergenic CR45347 + chr2L 20579944 intergenic not near genes chr2L 20583691 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 RAL-307_100b 885 chr2L 20576202 20576252 chr2L 20583687 20583745 blood 43 7490 14.5 10.5 12.5 3.2 7543 chr2L 20576202 intergenic CR45347 + chr2L 20579974 intergenic not near genes chr2L 20583745 3` UTR CR44909 - chr2L_43_20575001 chr2L_20575001 RAL-307_100b 886 chr2L 20589468 20589525 chr2L 20589570 20589627 52 98 23.0 19.5 21.2 2.3 159 chr2L 20589468 intron CR44909 - chr2L 20589548 intron CR44909 - chr2L 20589627 intron CR44909 - chr2L_52_20585001 chr2L_20585001 RAL-307_100b 887 chr2L 20597061 20597118 chr2L 20597163 20597210 37 100 12.5 13.5 13.0 2.6 149 chr2L 20597061 intron CR44909 - chr2L 20597136 intron CR44909 - chr2L 20597210 intron CR44909 - chr2L_37_20595001 chr2L_20595001 RAL-307_100b 888 chr2L 20607625 20607669 chr2L 20607717 20607765 39 90 16.0 14.5 15.2 2.4 140 chr2L 20607625 intron,3` UTR CR44909 -,CR43608 - chr2L 20607695 intron,3` UTR CR44909 -,CR43608 - chr2L 20607765 intron,3` UTR CR44909 -,CR43608 - chr2L_39_20605001 chr2L_20605001 RAL-307_100b 889 chr2L 20638382 20638404 chr2L 20638494 20638522 21 116 19.0 27.5 23.2 0.9 140 chr2L 20638382 intergenic not near genes chr2L 20638452 intergenic not near genes chr2L 20638522 intergenic not near genes chr2L_21_20635001 chr2L_20635001 RAL-307_100b 890 chr2L 20668676 20668717 chr2L 20668765 20668808 40 98 12.5 13.0 12.8 2.9 132 chr2L 20668676 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668808 intron CG31678 - chr2L_40_20665001 chr2L_20665001 RAL-307_100b 891 chr2L 20674805 20674864 chr2L 20674912 20674967 14 105 7.5 0.0 3.8 2.9 162 chr2L 20674805 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674967 intron CG31678 - chr2L_14_20670001 chr2L_20670001 RAL-307_100b 892 chr2L 20695769 20695829 chr2L 20695882 20695942 49 108 14.5 12.5 13.5 3.4 173 chr2L 20695769 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695942 intron Hr38 - chr2L_49_20695001 chr2L_20695001 RAL-307_100b 893 chr2L 20780971 20781024 chr2L 20781105 20781158 53 128 22.5 16.0 19.2 2.6 187 chr2L 20780971 intron cad + chr2L 20781064 intron cad + chr2L 20781158 intron cad + chr2L_53_20780001 chr2L_20780001 RAL-307_100b 894 chr2L 20818485 20818541 chr2L 20818591 20818648 39 99 18.5 14.0 16.2 2.3 163 chr2L 20818485 exon CheB38a - chr2L 20818566 intergenic CheB38a - chr2L 20818648 intergenic CheB38a - chr2L_39_20815001 chr2L_20815001 RAL-307_100b 895 chr2L 20835787 20835838 chr2L 20836528 20836580 Quasimodo 32 740 18.5 17.5 18.0 1.7 793 chr2L 20835787 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836580 intergenic Spn38F - chr2L_32_20835001 chr2L_20835001 RAL-307_100b 896 chr2L 20839687 20839736 chr2L 20839788 20839837 45 99 16.0 14.0 15.0 2.8 150 chr2L 20839687 intergenic not near genes chr2L 20839762 intergenic not near genes chr2L 20839837 intergenic not near genes chr2L_45_20835001 chr2L_20835001 RAL-307_100b 897 chr2L 20891520 20891538 chr2L 20896636 20896664 jockey 21 5123 16.0 15.0 15.5 1.3 5144 chr2L 20891520 intron,intron CG43739 -,sky - chr2L 20894092 intron,intron CG43739 -,sky - chr2L 20896664 intron,intron CG43739 -,sky - chr2L_21_20890001 chr2L_20890001 RAL-307_100b 898 chr2L 20891540 20891546 chr2L 20896635 20896672 jockey 5 5111 13.5 14.5 14.0 0.3 5132 chr2L 20891540 intron,intron CG43739 -,sky - chr2L 20894106 intron,intron CG43739 -,sky - chr2L 20896672 intron,intron CG43739 -,sky - chr2L_5_20890001 chr2L_20890001 RAL-307_100b 899 chr2L 20901471 20901478 chr2L 20902657 20902662 1360 9 1187 2.0 1.5 1.8 3.2 1191 chr2L 20901471 intron,intron CG43739 -,sky - chr2L 20902066 intron,intron CG43739 -,sky - chr2L 20902662 intron,intron CG43739 -,sky - chr2L_9_20900001 chr2L_20900001 RAL-307_100b 900 chr2L 20927272 20927320 chr2L 20927512 20927560 53 244 80.5 135.5 108.0 0.5 288 chr2L 20927272 exon CG9272 - chr2L 20927416 exon CG9272 - chr2L 20927560 exon CG9272 - chr2L_53_20925001 chr2L_20925001 RAL-307_100b 901 chr2L 20946919 20946959 chr2L 20947031 20947071 32 106 15.5 15.5 15.5 1.9 152 chr2L 20946919 intergenic CR44606 - chr2L 20946995 intergenic CR44606 - chr2L 20947071 intergenic CR44606 - chr2L_32_20945001 chr2L_20945001 RAL-307_100b 902 chr2L 20967056 20967108 chr2L 20967167 20967219 54 109 10.5 13.5 12.0 4.2 163 chr2L 20967056 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967219 3` UTR CG42238 - chr2L_54_20965001 chr2L_20965001 RAL-307_100b 903 chr2L 20976626 20976634 chr2L 20981466 20981474 X-element 8 4839 33.0 17.0 25.0 0.3 4848 chr2L 20976626 intron CG42238 - chr2L 20979050 intron CG42238 - chr2L 20981474 intron CG42238 - chr2L_8_20975001 chr2L_20975001 RAL-307_100b 904 chr2L 20976636 20976672 chr2L 20981456 20981511 X-element 33 4835 17.5 15.0 16.2 1.9 4875 chr2L 20976636 intron CG42238 - chr2L 20979074 intron CG42238 - chr2L 20981511 intron CG42238 - chr2L_33_20975001 chr2L_20975001 RAL-307_100b 905 chr2L 21019304 21019362 chr2L 21019450 21019498 45 138 11.5 4.5 8.0 5.0 194 chr2L 21019304 intron CG42238 - chr2L 21019401 intron CG42238 - chr2L 21019498 intron CG42238 - chr2L_45_21015001 chr2L_21015001 RAL-307_100b 906 chr2L 21020258 21020306 chr2L 21023954 21024007 NOF 43 3700 9.5 18.5 14.0 2.9 3749 chr2L 21020258 intron CG42238 - chr2L 21022132 intron CG42238 - chr2L 21024007 intron CG42238 - chr2L_43_21020001 chr2L_21020001 RAL-307_100b 907 chr2L 21035369 21035428 chr2L 21035503 21035534 55 130 18.0 17.5 17.8 2.9 165 chr2L 21035369 intron CG42238 - chr2L 21035452 intron CG42238 - chr2L 21035534 intron CG42238 - chr2L_55_21035001 chr2L_21035001 RAL-307_100b 908 chr2L 21041119 21041167 chr2L 21049400 21049424 Tirant 51 8282 9.0 18.0 13.5 3.5 8305 chr2L 21041119 intron CG42238 - chr2L 21045272 intron CG42238 - chr2L 21049424 intron CG42238 - chr2L_51_21045001 chr2L_21045001 RAL-307_100b 909 chr2L 21074898 21074907 chr2L 21075014 21075023 8 116 31.5 15.0 23.2 0.3 125 chr2L 21074898 intergenic not near genes chr2L 21074960 intergenic tadr + chr2L 21075023 intergenic tadr + chr2L_8_21070001 chr2L_21070001 RAL-307_100b 910 chr2L 21074908 21074951 chr2L 21075013 21075067 42 114 14.0 14.5 14.2 2.8 159 chr2L 21074908 intergenic tadr + chr2L 21074988 intergenic tadr + chr2L 21075067 intergenic tadr + chr2L_42_21070001 chr2L_21070001 RAL-307_100b 911 chr2L 21110629 21110684 chr2L 21110739 21110794 35 109 12.5 15.5 14.0 2.3 165 chr2L 21110629 intron Nhe2 + chr2L 21110712 intron Nhe2 + chr2L 21110794 intron Nhe2 + chr2L_35_21110001 chr2L_21110001 RAL-307_100b 912 chr2L 21118807 21118866 chr2L 21118947 21118976 54 137 14.0 18.5 16.2 3.1 169 chr2L 21118807 intron Nhe2 + chr2L 21118892 intron Nhe2 + chr2L 21118976 intron Nhe2 + chr2L_54_21115001 chr2L_21115001 RAL-307_100b 913 chr2L 21286581 21286634 chr2L 21286684 21286738 42 100 12.0 16.0 14.0 2.8 157 chr2L 21286581 exon Mio - chr2L 21286660 intron Mio - chr2L 21286738 intron Mio - chr2L_42_21285001 chr2L_21285001 RAL-307_100b 914 chr2L 21307447 21307470 chr2L 21307554 21307577 14 105 18.5 12.0 15.2 0.9 130 chr2L 21307447 intron Mio - chr2L 21307512 intron Mio - chr2L 21307577 intron Mio - chr2L_14_21305001 chr2L_21305001 RAL-307_100b 915 chr2L 21307471 21307499 chr2L 21307551 21307601 19 99 9.0 11.5 10.2 1.7 130 chr2L 21307471 intron Mio - chr2L 21307536 intron Mio - chr2L 21307601 intron Mio - chr2L_19_21305001 chr2L_21305001 RAL-307_100b 916 chr2L 21347533 21347582 chr2L 21355025 21355078 blood 18 7495 10.5 9.5 10.0 1.6 7545 chr2L 21347533 intron Tsp39D + chr2L 21351306 intron Tsp39D + chr2L 21355078 intron Tsp39D + chr2L_18_21350001 chr2L_21350001 RAL-307_100b 917 chr2L 21597023 21597028 chr2L 21604792 21604797 roo 5 7769 32.5 28.0 30.2 0.2 7774 chr2L 21597023 intergenic not near genes chr2L 21600910 intergenic not near genes chr2L 21604797 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-307_100b 918 chr2L 21597032 21597060 chr2L 21604776 21604817 roo 30 7765 18.0 18.5 18.2 1.6 7785 chr2L 21597032 intergenic not near genes chr2L 21600924 intergenic not near genes chr2L 21604817 intergenic not near genes chr2L_30_21600001 chr2L_21600001 RAL-307_100b 919 chr2L 21691802 21691860 chr2L 21698297 21698329 Burdock 19 6491 8.0 0.5 4.2 3.7 6527 chr2L 21691802 intron CG31619 + chr2L 21695066 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_19_21695001 chr2L_21695001 RAL-307_100b 920 chr2L 21754635 21754688 chr2L 21754741 21754794 45 105 9.5 15.0 12.2 3.4 159 chr2L 21754635 intron step - chr2L 21754714 intron step - chr2L 21754794 intron step - chr2L_45_21750001 chr2L_21750001 RAL-307_100b 921 chr2L 21755468 21755524 chr2L 21755617 21755662 66 146 13.0 14.5 13.8 4.5 194 chr2L 21755468 intron step - chr2L 21755565 intron step - chr2L 21755662 intron step - chr2L_66_21755001 chr2L_21755001 RAL-307_100b 922 chr2L 21757549 21757598 chr2L 21757655 21757704 38 105 15.0 15.5 15.2 2.3 155 chr2L 21757549 intergenic step -,CG1416 + chr2L 21757626 intergenic step -,CG1416 + chr2L 21757704 intergenic step -,CG1416 + chr2L_38_21755001 chr2L_21755001 RAL-307_100b 923 chr2L 21828128 21828174 chr2L 21828228 21828270 50 99 17.5 12.5 15.0 3.1 142 chr2L 21828128 intergenic tsh + chr2L 21828199 intergenic tsh + chr2L 21828270 intergenic tsh + chr2L_50_21825001 chr2L_21825001 RAL-307_100b 924 chr2L 21836385 21836424 chr2L 21836480 21836539 27 110 7.5 12.0 9.8 2.5 154 chr2L 21836385 3` UTR tsh + chr2L 21836462 3` UTR tsh + chr2L 21836539 3` UTR tsh + chr2L_27_21835001 chr2L_21835001 RAL-307_100b 925 chr2L 21855454 21855512 chr2L 21855564 21855619 40 109 15.5 11.5 13.5 2.8 165 chr2L 21855454 intron CR44917 + chr2L 21855536 intron CR44917 + chr2L 21855619 intron CR44917 + chr2L_40_21855001 chr2L_21855001 RAL-307_100b 926 chr2L 21859293 21859312 chr2L 21859398 21859417 28 104 39.5 16.0 27.8 1.0 124 chr2L 21859293 intron CR44917 + chr2L 21859355 intron CR44917 + chr2L 21859417 intron CR44917 + chr2L_28_21855001 chr2L_21855001 RAL-307_100b 927 chr2L 21859314 21859351 chr2L 21859397 21859456 44 101 15.5 15.0 15.2 2.7 142 chr2L 21859314 intron CR44917 + chr2L 21859385 intron CR44917 + chr2L 21859456 intron CR44917 + chr2L_44_21855001 chr2L_21855001 RAL-307_100b 928 chr2L 21860309 21860340 chr2L 21860487 21860490 5 172 1.5 3.5 2.5 1.4 181 chr2L 21860309 intron CR44917 + chr2L 21860400 intron CR44917 + chr2L 21860490 intron CR44917 + chr2L_5_21860001 chr2L_21860001 RAL-307_100b 929 chr2L 21933875 21933893 chr2L 21934004 21934022 5 126 27.0 33.5 30.2 0.2 147 chr2L 21933875 intergenic not near genes chr2L 21933948 intergenic not near genes chr2L 21934022 intergenic not near genes chr2L_5_21930001 chr2L_21930001 RAL-307_100b 930 chr2L 21933894 21933917 chr2L 21934003 21934010 13 114 17.5 32.5 25.0 0.5 116 chr2L 21933894 intergenic not near genes chr2L 21933952 intergenic not near genes chr2L 21934010 intergenic not near genes chr2L_13_21930001 chr2L_21930001 RAL-307_100b 931 chr2L 21934544 21934596 chr2L 21934692 21934734 45 141 15.5 12.5 14.0 3.0 190 chr2L 21934544 intergenic not near genes chr2L 21934639 intergenic not near genes chr2L 21934734 intergenic not near genes chr2L_45_21930001 chr2L_21930001 RAL-307_100b 932 chr2L 21953793 21953801 chr2L 21954669 21954677 5 876 83.0 122.5 102.8 0.0 884 chr2L 21953793 intergenic not near genes chr2L 21954235 intergenic not near genes chr2L 21954677 intergenic not near genes chr2L_5_21950001 chr2L_21950001 RAL-307_100b 933 chr2L 21953792 21953818 chr2L 21954679 21954725 59 885 90.5 130.0 110.2 0.5 933 chr2L 21953792 intergenic not near genes chr2L 21954258 intergenic not near genes chr2L 21954725 intergenic not near genes chr2L_59_21950001 chr2L_21950001 RAL-307_100b 934 chr2L 21973371 21973427 chr2L 21973685 21973741 51 301 19.5 16.0 17.8 2.7 370 chr2L 21973371 intergenic not near genes chr2L 21973556 intergenic not near genes chr2L 21973741 intergenic not near genes chr2L_51_21970001 chr2L_21970001 RAL-307_100b 935 chr2L 21981662 21981705 chr2L 21990852 21990895 roo 41 9187 24.5 31.0 27.8 1.4 9233 chr2L 21981662 exon CG2528 - chr2L 21986278 intron CG2528 - chr2L 21990895 exon CG2528 - chr2L_41_21985001 chr2L_21985001 RAL-307_100b 936 chr2L 21981706 21981713 chr2L 21990844 21990888 roo 5 9172 15.5 25.5 20.5 0.2 9182 chr2L 21981706 exon CG2528 - chr2L 21986297 intron CG2528 - chr2L 21990888 exon CG2528 - chr2L_5_21985001 chr2L_21985001 RAL-307_100b 937 chr2L 22011894 22011947 chr2L 22011998 22012042 57 101 17.0 15.0 16.0 3.4 148 chr2L 22011894 intergenic not near genes chr2L 22011968 intergenic not near genes chr2L 22012042 intergenic not near genes chr2L_57_22010001 chr2L_22010001 RAL-307_100b 938 chr2L 20835842 20835842 chr2L 22039331 22039335 4 1203491 17.5 26.5 22.0 0.2 1203493 chr2L 20835842 intergenic Oseg5 - chr2L 21437588 exon,exon,exon His1:CG33810 +,His1:CG33816 +,His1:CG33819 + chr2L 22039335 exon CG41434 + chr2L_4_21435001 chr2L_21435001 RAL-307_100b 939 chr2L 22047229 22047257 chr2L 22047379 22047396 21 147 6.0 24.0 15.0 1.3 167 chr2L 22047229 intergenic not near genes chr2L 22047312 intergenic not near genes chr2L 22047396 intergenic not near genes chr2L_21_22045001 chr2L_22045001 RAL-307_100b 940 chr2L 22107350 22107391 chr2L 22107502 22107521 18 149 12.5 4.0 8.2 2.0 171 chr2L 22107350 intergenic CG10834 - chr2L 22107436 intergenic CG10834 - chr2L 22107521 intergenic CG10834 - chr2L_18_22105001 chr2L_22105001 RAL-307_100b 941 chr2L 22212111 22212163 chr2L 22212683 22212735 52 571 5.5 7.0 6.2 7.2 624 chr2L 22212111 intron Ir40a - chr2L 22212423 intron Ir40a - chr2L 22212735 exon Ir40a - chr2L_52_22210001 chr2L_22210001 RAL-307_100b 942 chr2L 22215883 22215938 chr2L 22215994 22216034 47 109 18.5 17.0 17.8 2.5 151 chr2L 22215883 intergenic not near genes chr2L 22215958 intergenic not near genes chr2L 22216034 intergenic not near genes chr2L_47_22215001 chr2L_22215001 RAL-307_100b 943 chr2L 22239402 22239436 chr2L 22239508 22239542 28 103 31.0 18.0 24.5 1.1 140 chr2L 22239402 intron CR43765 - chr2L 22239472 3` UTR CR43765 - chr2L 22239542 3` UTR CR43765 - chr2L_28_22235001 chr2L_22235001 RAL-307_100b 944 chr2L 22239438 22239459 chr2L 22239507 22239565 19 99 20.0 17.0 18.5 1.0 127 chr2L 22239438 3` UTR CR43765 - chr2L 22239502 3` UTR CR43765 - chr2L 22239565 3` UTR CR43765 - chr2L_19_22235001 chr2L_22235001 RAL-307_100b 945 chr2L 22258595 22258606 chr2L 22260744 22260754 G6 9 2149 40.5 22.0 31.2 0.3 2159 chr2L 22258595 intergenic Tif-IA + chr2L 22259674 intergenic not near genes chr2L 22260754 intergenic not near genes chr2L_9_22255001 chr2L_22255001 RAL-307_100b 946 chr2L 22258608 22258647 chr2L 22260743 22260793 G6 46 2144 14.5 22.0 18.2 2.4 2185 chr2L 22258608 intergenic Tif-IA + chr2L 22259700 intergenic not near genes chr2L 22260793 intergenic not near genes chr2L_46_22255001 chr2L_22255001 RAL-307_100b 947 chr2L 22294329 22294378 chr2L 22294442 22294485 28 111 10.5 7.0 8.8 2.9 156 chr2L 22294329 intergenic not near genes chr2L 22294407 intergenic not near genes chr2L 22294485 intergenic not near genes chr2L_28_22290001 chr2L_22290001 RAL-307_100b 948 chr2L 22296890 22296896 chr2L 22297042 22297048 4 151 31.5 16.0 23.8 0.2 158 chr2L 22296890 intergenic not near genes chr2L 22296969 intergenic not near genes chr2L 22297048 intergenic not near genes chr2L_4_22295001 chr2L_22295001 RAL-307_100b 949 chr2L 22548922 22548934 chr2L 22550172 22550184 1360 16 1250 0.5 41.0 20.8 0.7 1262 chr2L 22548922 intergenic CG17490 + chr2L 22549553 intergenic not near genes chr2L 22550184 intergenic CG17493 + chr2L_16_22545001 chr2L_22545001 RAL-307_100b 950 chr2L 22548937 22548941 chr2L 22550156 22550191 1360 4 1238 0.5 30.5 15.5 0.2 1254 chr2L 22548937 intergenic CG17490 + chr2L 22549564 intergenic not near genes chr2L 22550191 intergenic CG17493 + chr2L_4_22545001 chr2L_22545001 RAL-307_100b 951 chr2L 22581945 22582000 chr2L 22583759 22583814 S-element 45 1811 13.5 18.0 15.8 2.7 1869 chr2L 22581945 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583814 intron CG17494 + chr2L_45_22580001 chr2L_22580001 RAL-307_100b 952 chr2L 22706781 22706840 chr2L 22706909 22706944 39 124 9.0 17.5 13.2 2.7 163 chr2L 22706781 intron CG40006 - chr2L 22706862 intron CG40006 - chr2L 22706944 intron CG40006 - chr2L_39_22705001 chr2L_22705001 RAL-307_100b 953 chr2L 22776395 22776452 chr2L 22778209 22778266 S-element 52 1812 11.5 21.0 16.2 3.0 1871 chr2L 22776395 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778266 intergenic not near genes chr2L_52_22775001 chr2L_22775001 RAL-307_100b 954 chr2L 22983916 22983970 chr2L 22984017 22984071 28 100 11.5 16.0 13.8 1.9 155 chr2L 22983916 intron cta + chr2L 22983994 intron cta + chr2L 22984071 intron cta + chr2L_28_22980001 chr2L_22980001 RAL-307_100b 955 chr2L 23168866 23168887 chr2L 23168967 23168981 21 99 22.5 35.5 29.0 0.7 115 chr2L 23168866 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168924 intron CG12567 - chr2L 23168981 intron CG12567 - chr2L_21_23165001 chr2L_23165001 RAL-307_100b 956 chr2R 469949 469980 chr2R 473199 473246 F-element 28 3262 7.5 12.5 10.0 2.5 3297 chr2R 469949 intergenic not near genes chr2R 471598 intergenic not near genes chr2R 473246 intergenic not near genes chr2R_28_470001 chr2R_470001 RAL-307_100b 957 chr2R 529323 529355 chr2R 537948 537975 Max-element 13 8644 8.0 13.5 10.8 1.1 8652 chr2R 529323 intron CG40378 + chr2R 533649 intron CG40378 + chr2R 537975 intron CG40378 + chr2R_13_530001 chr2R_530001 RAL-307_100b 958 chr2R 552735 552754 chr2R 553977 553996 1360 8 1240 22.5 17.5 20.0 0.4 1261 chr2R 552735 intron CG40378 + chr2R 553366 intron CG40378 + chr2R 553996 intron CG40378 + chr2R_8_550001 chr2R_550001 RAL-307_100b 959 chr2R 552756 552789 chr2R 553973 553983 1360 22 1215 9.0 15.5 12.2 1.7 1227 chr2R 552756 intron CG40378 + chr2R 553370 intron CG40378 + chr2R 553983 intron CG40378 + chr2R_22_550001 chr2R_550001 RAL-307_100b 960 chr2R 652496 652504 chr2R 652875 652883 6 378 27.0 12.5 19.8 0.3 387 chr2R 652496 intergenic not near genes chr2R 652690 intergenic not near genes chr2R 652883 intergenic not near genes chr2R_6_650001 chr2R_650001 RAL-307_100b 961 chr2R 952414 952456 chr2R 952556 952593 19 142 4.0 9.5 6.8 2.4 179 chr2R 952414 intergenic not near genes chr2R 952504 intergenic not near genes chr2R 952593 intergenic not near genes chr2R_19_950001 chr2R_950001 RAL-307_100b 962 chr2R 1082373 1082384 chr2R 1087133 1087161 Doc 8 4764 20.5 4.5 12.5 0.6 4788 chr2R 1082373 intron rl + chr2R 1084767 intron rl + chr2R 1087161 intron rl + chr2R_8_1080001 chr2R_1080001 RAL-307_100b 963 chr2R 1320204 1320204 chr2R 21358403 21358403 4 20038199 78.5 65.0 71.8 0.1 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_4_11335001 chr2R_11335001 RAL-307_100b 964 chr2R 1340583 1340589 chr2R 1340872 1340878 6 289 69.5 76.0 72.8 0.1 295 chr2R 1340583 intergenic not near genes chr2R 1340730 intergenic not near genes chr2R 1340878 intergenic not near genes chr2R_6_1340001 chr2R_1340001 RAL-307_100b 965 chr2R 1365838 1365895 chr2R 1365974 1366021 69 133 14.5 15.0 14.8 4.4 183 chr2R 1365838 intron l(2)41Ab + chr2R 1365930 intron l(2)41Ab + chr2R 1366021 intron l(2)41Ab + chr2R_69_1365001 chr2R_1365001 RAL-307_100b 966 chr2R 1516580 1516603 chr2R 1521333 1521356 1731 25 4752 39.0 22.5 30.8 0.8 4776 chr2R 1516580 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521356 5` UTR Maf1 - chr2R_25_1515001 chr2R_1515001 RAL-307_100b 967 chr2R 1755923 1755973 chr2R 1756062 1756112 17 139 6.5 8.0 7.2 2.1 189 chr2R 1755923 intron CG41520 + chr2R 1756018 intron CG41520 + chr2R 1756112 intron CG41520 + chr2R_17_1755001 chr2R_1755001 RAL-307_100b 968 chr2R 2015115 2015165 chr2R 2015207 2015267 45 97 14.0 15.0 14.5 2.9 152 chr2R 2015115 intron CG17684 - chr2R 2015191 intron CG17684 - chr2R 2015267 intron CG17684 - chr2R_45_2015001 chr2R_2015001 RAL-307_100b 969 chr2R 2044671 2044690 chr2R 2045493 2045512 10 821 8.0 16.0 12.0 0.8 841 chr2R 2044671 intron CG17684 - chr2R 2045092 intron CG17684 - chr2R 2045512 intron CG17684 - chr2R_10_2045001 chr2R_2045001 RAL-307_100b 970 chr2R 2110482 2110498 chr2R 2118065 2118081 17.6 12 7582 33.5 15.0 24.2 0.5 7599 chr2R 2110482 intron CG17684 - chr2R 2114282 intron CG17684 - chr2R 2118081 intron CG17684 - chr2R_12_2110001 chr2R_2110001 RAL-307_100b 971 chr2R 2498959 2499014 chr2R 2508130 2508173 roo 52 9168 16.5 10.5 13.5 3.6 9214 chr2R 2498959 intron MFS17 - chr2R 2503566 intron MFS17 - chr2R 2508173 intron MFS17 - chr2R_52_2500001 chr2R_2500001 RAL-307_100b 972 chr2R 2508283 2508333 chr2R 2508446 2508486 43 162 13.5 15.5 14.5 2.8 203 chr2R 2508283 intron MFS17 - chr2R 2508384 intron MFS17 - chr2R 2508486 intron MFS17 - chr2R_43_2505001 chr2R_2505001 RAL-307_100b 973 chr2R 1373049 1373060 chr2R 2589322 2589345 Cr1a 11 1216274 68.5 56.0 62.2 0.2 1216296 chr2R 1373049 intron l(2)41Ab + chr2R 1981197 intron CG17684 - chr2R 2589345 intergenic not near genes chr2R_11_1980001 chr2R_1980001 RAL-307_100b 974 chr2R 2875360 2875394 chr2R 2878899 2878934 HMS-Beagle 10 3536 67.5 13.0 40.2 0.2 3574 chr2R 2875360 intergenic not near genes chr2R 2877147 intergenic not near genes chr2R 2878934 intergenic not near genes chr2R_10_2875001 chr2R_2875001 RAL-307_100b 975 chr2R 3030119 3030128 chr2R 3030232 3030241 7 113 61.5 47.0 54.2 0.1 122 chr2R 3030119 intergenic not near genes chr2R 3030180 intergenic not near genes chr2R 3030241 intergenic not near genes chr2R_7_3030001 chr2R_3030001 RAL-307_100b 976 chr2R 3089384 3089386 chr2R 3089497 3089510 4 118 20.0 27.5 23.8 0.2 126 chr2R 3089384 intron CG42596 + chr2R 3089447 intron CG42596 + chr2R 3089510 intron CG42596 + chr2R_4_3085001 chr2R_3085001 RAL-307_100b 977 chr2R 3107722 3107750 chr2R 3108431 3108458 6 707 9.5 15.0 12.2 0.5 736 chr2R 3107722 intron CG42596 + chr2R 3108090 intron CG42596 + chr2R 3108458 intron CG42596 + chr2R_6_3105001 chr2R_3105001 RAL-307_100b 978 chr2R 3144064 3144110 chr2R 3393367 3393413 Doc 24 249301 56.5 19.0 37.8 0.6 249349 chr2R 3144064 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393413 intergenic not near genes chr2R_24_3265001 chr2R_3265001 RAL-307_100b 979 chr2R 3291793 3291955 chr2R 3914992 3915118 12 623190 59.0 75.5 67.2 0.2 623325 chr2R 3291793 intergenic not near genes chr2R 3603456 intergenic not near genes chr2R 3915118 intron uex - chr2R_12_3600001 chr2R_3600001 RAL-307_100b 980 chr2R 3293717 3293760 chr2R 3293820 3293823 15 100 16.0 11.5 13.8 1.0 106 chr2R 3293717 intergenic not near genes chr2R 3293770 intergenic not near genes chr2R 3293823 intergenic not near genes chr2R_15_3290001 chr2R_3290001 RAL-307_100b 981 chr2R 3515256 3515312 chr2R 3515369 3515425 31 111 41.5 46.0 43.8 0.7 169 chr2R 3515256 intergenic not near genes chr2R 3515340 intergenic not near genes chr2R 3515425 intergenic not near genes chr2R_31_3515001 chr2R_3515001 RAL-307_100b 982 chr2R 3532596 3532638 chr2R 3536064 3536099 Doc 16 3466 7.5 14.5 11.0 1.3 3503 chr2R 3532596 intergenic not near genes chr2R 3534348 intergenic not near genes chr2R 3536099 intergenic not near genes chr2R_16_3530001 chr2R_3530001 RAL-307_100b 983 chr2R 3927683 3927687 chr2R 4854360 4854369 gypsy10 5 926681 57.0 26.5 41.8 0.1 926686 chr2R 3927683 intron uex - chr2R 4391026 intron Gprk1 - chr2R 4854369 intergenic not near genes chr2R_5_4390001 chr2R_4390001 RAL-307_100b 984 chr2R 473355 473357 chr2R 4150694 4150696 4 3677339 38.5 59.0 48.8 0.1 3677341 chr2R 473355 intergenic not near genes chr2R 2312026 intergenic not near genes chr2R 4150696 intergenic not near genes chr2R_4_2310001 chr2R_2310001 RAL-307_100b 985 chr2R 4604526 4604582 chr2R 4604630 4604687 50 100 14.0 16.0 15.0 3.1 161 chr2R 4604526 intron p120ctn + chr2R 4604606 intron p120ctn + chr2R 4604687 intron p120ctn + chr2R_50_4600001 chr2R_4600001 RAL-307_100b 986 chr2R 4617896 4617949 chr2R 4618193 4618219 26 294 8.0 13.0 10.5 2.3 323 chr2R 4617896 intergenic not near genes chr2R 4618058 intergenic not near genes chr2R 4618219 intergenic not near genes chr2R_26_4615001 chr2R_4615001 RAL-307_100b 987 chr2R 4622931 4622950 chr2R 4624115 4624118 1360 5 1181 36.5 22.0 29.2 0.2 1187 chr2R 4622931 intergenic CR44101 - chr2R 4623524 intergenic not near genes chr2R 4624118 intergenic not near genes chr2R_5_4620001 chr2R_4620001 RAL-307_100b 988 chr2R 4622962 4622984 chr2R 4624110 4624168 1360 32 1170 18.5 19.0 18.8 1.6 1206 chr2R 4622962 intergenic CR44101 - chr2R 4623565 intergenic not near genes chr2R 4624168 intergenic not near genes chr2R_32_4620001 chr2R_4620001 RAL-307_100b 989 chr2R 4624619 4624674 chr2R 4626549 4626588 Bica 48 1928 18.5 19.5 19.0 2.4 1969 chr2R 4624619 intergenic not near genes chr2R 4625604 intergenic not near genes chr2R 4626588 intergenic not near genes chr2R_48_4625001 chr2R_4625001 RAL-307_100b 990 chr2R 4634154 4634156 chr2R 4634248 4634260 4 101 29.0 33.0 31.0 0.1 106 chr2R 4634154 intergenic not near genes chr2R 4634207 intergenic not near genes chr2R 4634260 intergenic not near genes chr2R_4_4630001 chr2R_4630001 RAL-307_100b 991 chr2R 4634159 4634174 chr2R 4634238 4634277 16 102 17.0 24.5 20.8 0.7 118 chr2R 4634159 intergenic not near genes chr2R 4634218 intergenic not near genes chr2R 4634277 intergenic not near genes chr2R_16_4630001 chr2R_4630001 RAL-307_100b 992 chr2R 4634175 4634185 chr2R 4634234 4634284 18 95 11.5 22.5 17.0 1.0 109 chr2R 4634175 intergenic not near genes chr2R 4634230 intergenic not near genes chr2R 4634284 intergenic not near genes chr2R_18_4630001 chr2R_4630001 RAL-307_100b 993 chr2R 4688097 4688131 chr2R 4688215 4688249 32 117 13.0 20.5 16.8 1.8 152 chr2R 4688097 intergenic not near genes chr2R 4688173 intergenic not near genes chr2R 4688249 intergenic not near genes chr2R_32_4685001 chr2R_4685001 RAL-307_100b 994 chr2R 4716236 4716256 chr2R 4716354 4716374 15 117 40.5 16.0 28.2 0.5 138 chr2R 4716236 intron Nipped-B - chr2R 4716305 intron Nipped-B - chr2R 4716374 intron Nipped-B - chr2R_15_4715001 chr2R_4715001 RAL-307_100b 995 chr2R 4716257 4716291 chr2R 4716352 4716409 65 108 17.0 16.0 16.5 3.7 152 chr2R 4716257 intron Nipped-B - chr2R 4716333 intron Nipped-B - chr2R 4716409 intron Nipped-B - chr2R_65_4715001 chr2R_4715001 RAL-307_100b 996 chr2R 4730794 4730810 chr2R 4731196 4731205 15 412 21.5 14.5 18.0 0.8 411 chr2R 4730794 intron CR45471 + chr2R 4731000 5` UTR CR45471 + chr2R 4731205 5` UTR CR45471 + chr2R_15_4730001 chr2R_4730001 RAL-307_100b 997 chr2R 4838847 4838902 chr2R 4840395 4840450 transib2 45 1544 14.5 15.5 15.0 2.8 1603 chr2R 4838847 intergenic not near genes chr2R 4839648 intergenic not near genes chr2R 4840450 intergenic not near genes chr2R_45_4835001 chr2R_4835001 RAL-307_100b 998 chr2R 4870718 4870742 chr2R 4871254 4871278 R1A1-element 23 534 24.5 16.5 20.5 1.1 560 chr2R 4870718 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871278 intergenic not near genes chr2R_23_4870001 chr2R_4870001 RAL-307_100b 999 chr2R 4887600 4887648 chr2R 4887815 4887869 41 219 14.5 16.0 15.2 2.5 269 chr2R 4887600 intergenic not near genes chr2R 4887734 intergenic not near genes chr2R 4887869 intergenic not near genes chr2R_41_4885001 chr2R_4885001 RAL-307_100b 1000 chr2R 4888576 4888595 chr2R 4888688 4888707 13 110 27.5 13.0 20.2 0.6 131 chr2R 4888576 intergenic not near genes chr2R 4888642 intergenic not near genes chr2R 4888707 intergenic not near genes chr2R_13_4885001 chr2R_4885001 RAL-307_100b 1001 chr2R 4916073 4916120 chr2R 4916176 4916223 44 101 10.5 18.5 14.5 2.8 150 chr2R 4916073 intergenic not near genes chr2R 4916148 intergenic not near genes chr2R 4916223 intergenic not near genes chr2R_44_4915001 chr2R_4915001 RAL-307_100b 1002 chr2R 4933009 4933013 chr2R 4933126 4933152 7 133 10.5 26.0 18.2 0.4 143 chr2R 4933009 intron Ir41a + chr2R 4933080 intron Ir41a + chr2R 4933152 intron Ir41a + chr2R_7_4930001 chr2R_4930001 RAL-307_100b 1003 chr2R 4933352 4933390 chr2R 4933927 4933979 40 583 13.0 16.5 14.8 2.5 627 chr2R 4933352 intron Ir41a + chr2R 4933666 intron Ir41a + chr2R 4933979 intron Ir41a + chr2R_40_4930001 chr2R_4930001 RAL-307_100b 1004 chr2R 4956990 4957048 chr2R 4957118 4957176 47 127 8.0 13.5 10.8 4.0 186 chr2R 4956990 intron Ir41a + chr2R 4957083 intron Ir41a + chr2R 4957176 intron Ir41a + chr2R_47_4955001 chr2R_4955001 RAL-307_100b 1005 chr2R 4996334 4996341 chr2R 4996456 4996489 11 146 11.0 16.5 13.8 0.7 155 chr2R 4996334 intron Ir41a + chr2R 4996412 intron Ir41a + chr2R 4996489 intron Ir41a + chr2R_11_4995001 chr2R_4995001 RAL-307_100b 1006 chr2R 5144959 5145014 chr2R 5145225 5145280 38 265 12.0 13.5 12.8 2.8 321 chr2R 5144959 intron Atf6 + chr2R 5145120 intron Atf6 + chr2R 5145280 intron Atf6 + chr2R_38_5145001 chr2R_5145001 RAL-307_100b 1007 chr2R 5192237 5192241 chr2R 5192352 5192358 4 118 14.0 1.0 7.5 0.5 121 chr2R 5192237 intron Nipped-A - chr2R 5192298 intron Nipped-A - chr2R 5192358 intron Nipped-A - chr2R_4_5190001 chr2R_5190001 RAL-307_100b 1008 chr2R 5192243 5192350 chr2R 5192350 5192418 29 85 1.0 1.0 1.0 14.5 175 chr2R 5192243 intron Nipped-A - chr2R 5192330 intron Nipped-A - chr2R 5192418 intron Nipped-A - chr2R_29_5190001 chr2R_5190001 RAL-307_100b 1009 chr2R 5237323 5237372 chr2R 5237430 5237447 34 104 12.0 0.5 6.2 4.7 124 chr2R 5237323 intron Nipped-A - chr2R 5237385 intron Nipped-A - chr2R 5237447 intron Nipped-A - chr2R_34_5235001 chr2R_5235001 RAL-307_100b 1010 chr2R 5417979 5418024 chr2R 5420626 5420669 Burdock 53 2654 21.0 14.0 17.5 2.9 2690 chr2R 5417979 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420669 intron laccase2 + chr2R_53_5415001 chr2R_5415001 RAL-307_100b 1011 chr2R 5472341 5472379 chr2R 5472461 5472468 35 115 23.5 20.0 21.8 1.5 127 chr2R 5472341 intron CG30440 - chr2R 5472404 intron CG30440 - chr2R 5472468 intron CG30440 - chr2R_35_5470001 chr2R_5470001 RAL-307_100b 1012 chr2R 5476329 5476332 chr2R 5476898 5476901 5 569 38.5 19.5 29.0 0.2 572 chr2R 5476329 intron CG30440 - chr2R 5476615 intron CG30440 - chr2R 5476901 intron CG30440 - chr2R_5_5475001 chr2R_5475001 RAL-307_100b 1013 chr2R 5476333 5476385 chr2R 5476896 5476954 55 563 11.5 19.0 15.2 3.4 621 chr2R 5476333 intron CG30440 - chr2R 5476644 intron CG30440 - chr2R 5476954 intron CG30440 - chr2R_55_5475001 chr2R_5475001 RAL-307_100b 1014 chr2R 5484846 5484886 chr2R 5484954 5484998 32 109 0.5 14.0 7.2 3.9 152 chr2R 5484846 intron CG30440 - chr2R 5484922 intron CG30440 - chr2R 5484998 intron CG30440 - chr2R_32_5480001 chr2R_5480001 RAL-307_100b 1015 chr2R 5541913 5541967 chr2R 5542171 5542225 33 254 11.0 10.5 10.8 2.8 312 chr2R 5541913 intron CG30438 + chr2R 5542069 intron CG30438 + chr2R 5542225 intron CG30438 + chr2R_33_5540001 chr2R_5540001 RAL-307_100b 1016 chr2R 5543200 5543222 chr2R 5547279 5547331 invader1 26 4102 1.0 17.0 9.0 2.6 4131 chr2R 5543200 intron CG30438 + chr2R 5545266 intron CG30438 + chr2R 5547331 intron CG30438 + chr2R_26_5545001 chr2R_5545001 RAL-307_100b 1017 chr2R 5581398 5581422 chr2R 5627632 5627656 16 46234 50.5 36.0 43.2 0.4 46258 chr2R 5581398 intergenic not near genes chr2R 5604527 intron Fis1 - chr2R 5627656 intergenic not near genes chr2R_16_5600001 chr2R_5600001 RAL-307_100b 1018 chr2R 5606514 5606766 chr2R 5736493 5736775 5 130007 13.5 74.5 44.0 0.1 130261 chr2R 5606514 intergenic not near genes chr2R 5671644 intergenic kune + chr2R 5736775 intergenic not near genes chr2R_5_5670001 chr2R_5670001 RAL-307_100b 1019 chr2R 5621346 5621403 chr2R 5621451 5621508 29 101 12.0 13.5 12.8 2.1 162 chr2R 5621346 intergenic not near genes chr2R 5621427 intergenic not near genes chr2R 5621508 intergenic not near genes chr2R_29_5620001 chr2R_5620001 RAL-307_100b 1020 chr2R 1880759 1880810 chr2R 5639655 5639656 7 3758861 134.5 82.5 108.5 0.1 3758897 chr2R 1880759 intron CG17684 - chr2R 3760208 intergenic not near genes chr2R 5639656 intergenic not near genes chr2R_7_3760001 chr2R_3760001 RAL-307_100b 1021 chr2R 5606683 5606841 chr2R 5736589 5736804 18 129967 51.5 86.0 68.8 0.3 130121 chr2R 5606683 intergenic not near genes chr2R 5671744 5` UTR kune + chr2R 5736804 intergenic not near genes chr2R_18_5670001 chr2R_5670001 RAL-307_100b 1022 chr2R 5750424 5750454 chr2R 5750541 5750571 20 116 27.0 16.5 21.8 0.9 147 chr2R 5750424 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750571 intergenic not near genes chr2R_20_5750001 chr2R_5750001 RAL-307_100b 1023 chr2R 5772508 5772522 chr2R 5772627 5772641 11 119 30.0 11.5 20.8 0.5 133 chr2R 5772508 3` UTR Gp210 + chr2R 5772574 3` UTR Gp210 + chr2R 5772641 3` UTR Gp210 + chr2R_11_5770001 chr2R_5770001 RAL-307_100b 1024 chr2R 5772523 5772814 chr2R 5772622 5772921 23 113 27.5 9.5 18.5 1.2 398 chr2R 5772523 3` UTR Gp210 + chr2R 5772722 3` UTR Gp210 + chr2R 5772921 3` UTR Gp210 + chr2R_23_5770001 chr2R_5770001 RAL-307_100b 1025 chr2R 5772816 5772819 chr2R 5772923 5772926 5 107 25.0 14.0 19.5 0.2 110 chr2R 5772816 3` UTR Gp210 + chr2R 5772871 3` UTR Gp210 + chr2R 5772926 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-307_100b 1026 chr2R 5772820 5772858 chr2R 5772921 5772965 32 105 10.5 13.5 12.0 2.5 145 chr2R 5772820 3` UTR Gp210 + chr2R 5772892 3` UTR Gp210 + chr2R 5772965 3` UTR Gp210 + chr2R_32_5770001 chr2R_5770001 RAL-307_100b 1027 chr2R 5790439 5790446 chr2R 5790549 5790555 5 109 23.5 4.0 13.8 0.3 116 chr2R 5790439 intergenic not near genes chr2R 5790497 intergenic not near genes chr2R 5790555 intergenic not near genes chr2R_5_5790001 chr2R_5790001 RAL-307_100b 1028 chr2R 5790447 5790496 chr2R 5790547 5790601 31 106 9.0 3.0 6.0 4.4 154 chr2R 5790447 intergenic not near genes chr2R 5790524 intergenic not near genes chr2R 5790601 intergenic not near genes chr2R_31_5790001 chr2R_5790001 RAL-307_100b 1029 chr2R 5869252 5869254 chr2R 5874353 5874355 flea 5 5101 45.0 17.0 31.0 0.2 5103 chr2R 5869252 intergenic not near genes chr2R 5871804 intergenic not near genes chr2R 5874355 intergenic not near genes chr2R_5_5870001 chr2R_5870001 RAL-307_100b 1030 chr2R 5869255 5869269 chr2R 5874351 5874370 flea 14 5100 35.0 15.5 25.2 0.5 5115 chr2R 5869255 intergenic not near genes chr2R 5871812 intergenic not near genes chr2R 5874370 intergenic not near genes chr2R_14_5870001 chr2R_5870001 RAL-307_100b 1031 chr2R 5869270 5869309 chr2R 5874350 5874378 flea 47 5097 15.5 14.5 15.0 2.9 5108 chr2R 5869270 intergenic not near genes chr2R 5871824 intergenic not near genes chr2R 5874378 intergenic not near genes chr2R_47_5870001 chr2R_5870001 RAL-307_100b 1032 chr2R 5876885 5876899 chr2R 5877105 5877119 11 220 35.5 16.5 26.0 0.4 234 chr2R 5876885 intergenic not near genes chr2R 5877002 intergenic not near genes chr2R 5877119 intergenic not near genes chr2R_11_5875001 chr2R_5875001 RAL-307_100b 1033 chr2R 5876900 5876937 chr2R 5877102 5877151 43 212 13.0 14.0 13.5 3.0 251 chr2R 5876900 intergenic not near genes chr2R 5877026 intergenic not near genes chr2R 5877151 intergenic not near genes chr2R_43_5875001 chr2R_5875001 RAL-307_100b 1034 chr2R 5885343 5885378 chr2R 5885497 5885532 31 153 11.5 12.0 11.8 2.4 189 chr2R 5885343 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885532 5` UTR CR44125 + chr2R_31_5885001 chr2R_5885001 RAL-307_100b 1035 chr2R 5902144 5902191 chr2R 5909718 5909775 17.6 29 7581 7.0 7.5 7.2 3.5 7631 chr2R 5902144 intron CG43366 + chr2R 5905960 intron CG43366 + chr2R 5909775 intron CG43366 + chr2R_29_5905001 chr2R_5905001 RAL-307_100b 1036 chr2R 5917747 5917802 chr2R 5917849 5917906 51 103 18.5 13.5 16.0 3.0 159 chr2R 5917747 intron CG43366 + chr2R 5917826 intron CG43366 + chr2R 5917906 intron CG43366 + chr2R_51_5915001 chr2R_5915001 RAL-307_100b 1037 chr2R 5932771 5932825 chr2R 5932875 5932895 45 101 20.0 19.0 19.5 2.2 124 chr2R 5932771 intergenic not near genes chr2R 5932833 intergenic not near genes chr2R 5932895 intergenic not near genes chr2R_45_5930001 chr2R_5930001 RAL-307_100b 1038 chr2R 5939651 5939653 chr2R 5940873 5940875 INE-1 4 1222 20.5 34.0 27.2 0.1 1224 chr2R 5939651 intergenic not near genes chr2R 5940263 intergenic not near genes chr2R 5940875 intergenic not near genes chr2R_4_5940001 chr2R_5940001 RAL-307_100b 1039 chr2R 5939654 5939670 chr2R 5940870 5940892 INE-1 23 1219 11.0 33.0 22.0 1.0 1238 chr2R 5939654 intergenic not near genes chr2R 5940273 intergenic not near genes chr2R 5940892 intergenic not near genes chr2R_23_5940001 chr2R_5940001 RAL-307_100b 1040 chr2R 5951166 5951182 chr2R 5951277 5951296 13 114 29.0 25.5 27.2 0.5 130 chr2R 5951166 intergenic not near genes chr2R 5951231 intergenic not near genes chr2R 5951296 intergenic not near genes chr2R_13_5950001 chr2R_5950001 RAL-307_100b 1041 chr2R 5951183 5951200 chr2R 5951274 5951306 21 108 21.0 23.5 22.2 0.9 123 chr2R 5951183 intergenic not near genes chr2R 5951244 intergenic not near genes chr2R 5951306 intergenic not near genes chr2R_21_5950001 chr2R_5950001 RAL-307_100b 1042 chr2R 5953056 5953094 chr2R 5953159 5953192 20 102 10.5 13.0 11.8 1.6 136 chr2R 5953056 intergenic not near genes chr2R 5953124 intergenic not near genes chr2R 5953192 intergenic not near genes chr2R_20_5950001 chr2R_5950001 RAL-307_100b 1043 chr2R 5991932 5991938 chr2R 5992045 5992048 6 112 29.5 27.5 28.5 0.2 116 chr2R 5991932 intron Src42A + chr2R 5991990 intron Src42A + chr2R 5992048 intron Src42A + chr2R_6_5990001 chr2R_5990001 RAL-307_100b 1044 chr2R 5991942 5991949 chr2R 5992040 5992062 9 111 23.0 24.0 23.5 0.4 120 chr2R 5991942 intron Src42A + chr2R 5992002 intron Src42A + chr2R 5992062 intron Src42A + chr2R_9_5990001 chr2R_5990001 RAL-307_100b 1045 chr2R 5991950 5991963 chr2R 5992030 5992076 22 109 15.0 20.0 17.5 1.2 126 chr2R 5991950 intron Src42A + chr2R 5992013 intron Src42A + chr2R 5992076 intron Src42A + chr2R_22_5990001 chr2R_5990001 RAL-307_100b 1046 chr2R 6013634 6013693 chr2R 6013742 6013801 61 101 15.5 16.5 16.0 3.6 167 chr2R 6013634 intergenic Act42A - chr2R 6013718 intergenic Act42A - chr2R 6013801 intergenic Act42A - chr2R_61_6010001 chr2R_6010001 RAL-307_100b 1047 chr2R 6096697 6096700 chr2R 6101920 6101923 BS 5 5223 51.5 22.0 36.8 0.1 5226 chr2R 6096697 intron EcR - chr2R 6099310 intron EcR - chr2R 6101923 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-307_100b 1048 chr2R 6096707 6096720 chr2R 6101911 6101943 BS 17 5214 36.0 16.5 26.2 0.6 5236 chr2R 6096707 intron EcR - chr2R 6099325 intron EcR - chr2R 6101943 intron EcR - chr2R_17_6095001 chr2R_6095001 RAL-307_100b 1049 chr2R 6096721 6096751 chr2R 6101910 6101943 BS 26 5212 15.0 16.5 15.8 1.5 5222 chr2R 6096721 intron EcR - chr2R 6099332 intron EcR - chr2R 6101943 intron EcR - chr2R_26_6095001 chr2R_6095001 RAL-307_100b 1050 chr2R 6126923 6126962 chr2R 6127050 6127095 37 131 15.5 11.0 13.2 2.6 172 chr2R 6126923 intron EcR - chr2R 6127009 intron EcR - chr2R 6127095 intron EcR - chr2R_37_6125001 chr2R_6125001 RAL-307_100b 1051 chr2R 6168173 6168227 chr2R 6168280 6168321 46 106 11.0 11.5 11.2 3.8 148 chr2R 6168173 intron EcR - chr2R 6168247 intron EcR - chr2R 6168321 intron EcR - chr2R_46_6165001 chr2R_6165001 RAL-307_100b 1052 chr2R 6178097 6178144 chr2R 6178248 6178295 40 149 11.0 16.0 13.5 2.8 198 chr2R 6178097 intergenic not near genes chr2R 6178196 intergenic not near genes chr2R 6178295 intergenic not near genes chr2R_40_6175001 chr2R_6175001 RAL-307_100b 1053 chr2R 6194660 6194701 chr2R 6194768 6194784 25 105 26.0 27.5 26.8 0.9 124 chr2R 6194660 intron Ptr - chr2R 6194722 intron Ptr - chr2R 6194784 intron Ptr - chr2R_25_6190001 chr2R_6190001 RAL-307_100b 1054 chr2R 3998868 3998879 chr2R 6486818 6486833 11 2487951 76.0 55.0 65.5 0.2 2487965 chr2R 3998868 intergenic not near genes chr2R 5242850 intron Nipped-A - chr2R 6486833 intergenic not near genes chr2R_11_5240001 chr2R_5240001 RAL-307_100b 1055 chr2R 6494510 6494537 chr2R 6499297 6499324 F-element 15 4786 20.0 8.5 14.2 1.0 4814 chr2R 6494510 intergenic not near genes chr2R 6496917 intergenic not near genes chr2R 6499324 intergenic not near genes chr2R_15_6495001 chr2R_6495001 RAL-307_100b 1056 chr2R 6494538 6494553 chr2R 6499288 6499340 F-element 8 4779 11.5 7.5 9.5 0.8 4802 chr2R 6494538 intergenic not near genes chr2R 6496939 intergenic not near genes chr2R 6499340 intergenic not near genes chr2R_8_6495001 chr2R_6495001 RAL-307_100b 1057 chr2R 6530742 6530798 chr2R 6530847 6530903 45 104 10.0 13.0 11.5 3.6 161 chr2R 6530742 intron jing + chr2R 6530822 intron jing + chr2R 6530903 intron jing + chr2R_45_6530001 chr2R_6530001 RAL-307_100b 1058 chr2R 6539796 6539850 chr2R 6539944 6539968 22 138 10.5 0.0 5.2 3.5 172 chr2R 6539796 intron jing + chr2R 6539882 intron jing + chr2R 6539968 intron jing + chr2R_22_6535001 chr2R_6535001 RAL-307_100b 1059 chr2R 6579774 6579804 chr2R 6584886 6584916 flea 23 5111 16.0 9.5 12.8 1.7 5142 chr2R 6579774 intron jing + chr2R 6582345 intron jing + chr2R 6584916 intron jing + chr2R_23_6580001 chr2R_6580001 RAL-307_100b 1060 chr2R 6588109 6588154 chr2R 6591096 6591148 39 2993 111.0 149.5 130.2 0.3 3039 chr2R 6588109 intron jing + chr2R 6589628 intron jing + chr2R 6591148 intron jing + chr2R_39_6585001 chr2R_6585001 RAL-307_100b 1061 chr2R 6633172 6633232 chr2R 6633274 6633334 48 101 16.5 12.0 14.2 3.2 162 chr2R 6633172 intergenic Vha16-1 -,Trap1 - chr2R 6633253 intergenic Vha16-1 -,Trap1 - chr2R 6633334 intergenic Vha16-1 -,Trap1 - chr2R_48_6630001 chr2R_6630001 RAL-307_100b 1062 chr2R 6699567 6699622 chr2R 6699675 6699732 43 109 10.5 9.5 10.0 3.9 165 chr2R 6699567 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699732 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_43_6695001 chr2R_6695001 RAL-307_100b 1063 chr2R 6952151 6952185 chr2R 6959751 6959790 opus 33 7605 20.5 14.0 17.2 1.8 7639 chr2R 6952151 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955970 intron,intron mim -,CheB42c - chr2R 6959790 intron,intron mim -,CheB42c - chr2R_33_6955001 chr2R_6955001 RAL-307_100b 1064 chr2R 6965238 6965244 chr2R 6965349 6965355 4 111 49.0 19.5 34.2 0.1 117 chr2R 6965238 intron,intron mim -,CheB42c - chr2R 6965296 intron,intron mim -,CheB42c - chr2R 6965355 intron,intron mim -,CheB42c - chr2R_4_6965001 chr2R_6965001 RAL-307_100b 1065 chr2R 6965246 6965295 chr2R 6965347 6965403 68 105 15.0 18.5 16.8 3.8 157 chr2R 6965246 intron,intron mim -,CheB42c - chr2R 6965324 intron,intron mim -,CheB42c - chr2R 6965403 intron,intron mim -,CheB42c - chr2R_68_6965001 chr2R_6965001 RAL-307_100b 1066 chr2R 7139947 7139954 chr2R 7141448 7141471 hopper2 6 1514 3.0 37.5 20.2 0.3 1524 chr2R 7139947 intergenic not near genes chr2R 7140709 intergenic not near genes chr2R 7141471 intergenic not near genes chr2R_6_7140001 chr2R_7140001 RAL-307_100b 1067 chr2R 7180994 7180999 chr2R 7181086 7181090 7 96 29.0 18.5 23.8 0.3 96 chr2R 7180994 intron pk + chr2R 7181042 intron pk + chr2R 7181090 intron pk + chr2R_7_7180001 chr2R_7180001 RAL-307_100b 1068 chr2R 7181001 7181023 chr2R 7181083 7181124 26 92 15.5 16.5 16.0 1.5 123 chr2R 7181001 intron pk + chr2R 7181062 intron pk + chr2R 7181124 intron pk + chr2R_26_7180001 chr2R_7180001 RAL-307_100b 1069 chr2R 7196552 7196597 chr2R 7201352 7201371 F-element 29 4798 15.0 0.0 7.5 3.4 4819 chr2R 7196552 intron pk + chr2R 7198962 intron pk + chr2R 7201371 intron pk + chr2R_29_7195001 chr2R_7195001 RAL-307_100b 1070 chr2R 7209844 7209873 chr2R 7217588 7217626 roo 34 7766 15.0 20.0 17.5 1.8 7782 chr2R 7209844 intron pk + chr2R 7213735 intron pk + chr2R 7217626 intron pk + chr2R_34_7210001 chr2R_7210001 RAL-307_100b 1071 chr2R 7235797 7235818 chr2R 7240914 7240935 jockey 17 5117 27.0 10.5 18.8 0.9 5138 chr2R 7235797 intergenic not near genes chr2R 7238366 intergenic not near genes chr2R 7240935 intergenic not near genes chr2R_17_7235001 chr2R_7235001 RAL-307_100b 1072 chr2R 7235821 7235831 chr2R 7240913 7240948 jockey 11 5109 20.5 10.5 15.5 0.7 5127 chr2R 7235821 intergenic not near genes chr2R 7238384 intergenic not near genes chr2R 7240948 intergenic not near genes chr2R_11_7235001 chr2R_7235001 RAL-307_100b 1073 chr2R 7235832 7235849 chr2R 7240909 7240960 jockey 19 5105 14.5 11.0 12.8 1.4 5128 chr2R 7235832 intergenic not near genes chr2R 7238396 intergenic not near genes chr2R 7240960 intergenic not near genes chr2R_19_7235001 chr2R_7235001 RAL-307_100b 1074 chr2R 7242577 7242618 chr2R 7242691 7242729 16 109 20.5 3.0 11.8 1.2 152 chr2R 7242577 intergenic Ady43A - chr2R 7242653 intergenic Ady43A - chr2R 7242729 intergenic Ady43A - chr2R_16_7240001 chr2R_7240001 RAL-307_100b 1075 chr2R 7250721 7250754 chr2R 7250819 7250838 33 114 14.0 14.0 14.0 2.2 117 chr2R 7250721 intergenic Gadd45 + chr2R 7250780 intergenic Gadd45 + chr2R 7250838 intergenic Gadd45 + chr2R_33_7250001 chr2R_7250001 RAL-307_100b 1076 chr2R 7262173 7262212 chr2R 7269259 7269288 297 13 7082 10.0 25.0 17.5 0.7 7115 chr2R 7262173 intergenic not near genes chr2R 7265730 intergenic not near genes chr2R 7269288 intergenic not near genes chr2R_13_7265001 chr2R_7265001 RAL-307_100b 1077 chr2R 7272222 7272286 chr2R 7272339 7272393 25 107 0.0 16.5 8.2 2.7 171 chr2R 7272222 intergenic Br140 - chr2R 7272308 3` UTR Br140 - chr2R 7272393 3` UTR Br140 - chr2R_25_7270001 chr2R_7270001 RAL-307_100b 1078 chr2R 7290182 7290222 chr2R 7290303 7290347 35 126 11.5 17.5 14.5 2.3 165 chr2R 7290182 intron pwn + chr2R 7290264 intron pwn + chr2R 7290347 intron pwn + chr2R_35_7290001 chr2R_7290001 RAL-307_100b 1079 chr2R 7434878 7434882 chr2R 7439203 7439208 Juan 4 4326 21.0 22.5 21.8 0.2 4330 chr2R 7434878 intergenic so + chr2R 7437043 intergenic not near genes chr2R 7439208 intergenic not near genes chr2R_4_7435001 chr2R_7435001 RAL-307_100b 1080 chr2R 7434885 7434912 chr2R 7439202 7439238 Juan 20 4326 20.5 22.5 21.5 0.9 4353 chr2R 7434885 intergenic so + chr2R 7437062 intergenic not near genes chr2R 7439238 intergenic not near genes chr2R_20_7435001 chr2R_7435001 RAL-307_100b 1081 chr2R 7608386 7608402 chr2R 7613614 7613630 I-element 14 5227 25.5 22.5 24.0 0.6 5244 chr2R 7608386 intron CG1358 - chr2R 7611008 intron CG1358 - chr2R 7613630 intron CG1358 - chr2R_14_7610001 chr2R_7610001 RAL-307_100b 1082 chr2R 7608405 7608435 chr2R 7613609 7613638 I-element 30 5220 13.0 19.0 16.0 1.8 5233 chr2R 7608405 intron CG1358 - chr2R 7611022 intron CG1358 - chr2R 7613638 intron CG1358 - chr2R_30_7610001 chr2R_7610001 RAL-307_100b 1083 chr2R 7614727 7614733 chr2R 7614839 7614845 5 112 1.0 11.0 6.0 0.7 118 chr2R 7614727 intron CG1358 - chr2R 7614786 intron CG1358 - chr2R 7614845 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-307_100b 1084 chr2R 7614734 7614781 chr2R 7614838 7614888 29 111 1.0 10.5 5.8 4.3 154 chr2R 7614734 intron CG1358 - chr2R 7614811 intron CG1358 - chr2R 7614888 intron CG1358 - chr2R_29_7610001 chr2R_7610001 RAL-307_100b 1085 chr2R 7642844 7642892 chr2R 7642949 7642997 50 102 17.0 22.5 19.8 2.4 153 chr2R 7642844 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642997 intron CG43340 + chr2R_50_7640001 chr2R_7640001 RAL-307_100b 1086 chr2R 7691986 7692038 chr2R 7692092 7692144 37 106 11.5 15.0 13.2 2.6 158 chr2R 7691986 intron CG1399 - chr2R 7692065 intron CG1399 - chr2R 7692144 intron CG1399 - chr2R_37_7690001 chr2R_7690001 RAL-307_100b 1087 chr2R 7737886 7737906 chr2R 7737990 7738010 12 103 26.0 22.5 24.2 0.5 124 chr2R 7737886 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738010 intergenic not near genes chr2R_12_7735001 chr2R_7735001 RAL-307_100b 1088 chr2R 7815650 7815705 chr2R 7822139 7822182 Burdock 43 6490 12.5 9.0 10.8 3.6 6532 chr2R 7815650 intergenic CG1882 + chr2R 7818916 intergenic not near genes chr2R 7822182 3` UTR cathD - chr2R_43_7815001 chr2R_7815001 RAL-307_100b 1089 chr2R 7862208 7862250 chr2R 7867347 7867386 flea 20 5134 12.0 11.0 11.5 1.6 5178 chr2R 7862208 intron Dgk - chr2R 7864797 intron Dgk - chr2R 7867386 intron Dgk - chr2R_20_7860001 chr2R_7860001 RAL-307_100b 1090 chr2R 7869168 7869173 chr2R 7873979 7873984 Doc 6 4811 46.0 21.5 33.8 0.2 4816 chr2R 7869168 intron Dgk - chr2R 7871576 intron Dgk - chr2R 7873984 intron Dgk - chr2R_6_7870001 chr2R_7870001 RAL-307_100b 1091 chr2R 7869174 7869178 chr2R 7873978 7873989 Doc 8 4808 45.0 21.0 33.0 0.2 4815 chr2R 7869174 intron Dgk - chr2R 7871582 intron Dgk - chr2R 7873989 intron Dgk - chr2R_8_7870001 chr2R_7870001 RAL-307_100b 1092 chr2R 7869179 7869217 chr2R 7873975 7874022 Doc 36 4807 24.5 18.0 21.2 1.6 4843 chr2R 7869179 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874022 intron Dgk - chr2R_36_7870001 chr2R_7870001 RAL-307_100b 1093 chr2R 7899507 7899544 chr2R 10066495 10066498 6 2166981 18.0 66.0 42.0 0.1 2166991 chr2R 7899507 intron CG30377 + chr2R 8983002 intron CG8213 - chr2R 10066498 5` UTR CG2292 - chr2R_6_8980001 chr2R_8980001 RAL-307_100b 1094 chr2R 7901664 7901718 chr2R 7901854 7901858 58 181 10.0 11.0 10.5 5.0 194 chr2R 7901664 intron CG30377 + chr2R 7901761 intron CG30377 + chr2R 7901858 intron CG30377 + chr2R_58_7900001 chr2R_7900001 RAL-307_100b 1095 chr2R 7915687 7915746 chr2R 7915804 7915863 45 115 9.5 12.0 10.8 3.8 176 chr2R 7915687 intron CG12159 - chr2R 7915775 intron CG12159 - chr2R 7915863 intron CG12159 - chr2R_45_7915001 chr2R_7915001 RAL-307_100b 1096 chr2R 7997002 7997046 chr2R 7997115 7997130 47 110 8.0 22.5 15.2 2.9 128 chr2R 7997002 intron Hey - chr2R 7997066 intron Hey - chr2R 7997130 intron Hey - chr2R_47_7995001 chr2R_7995001 RAL-307_100b 1097 chr2R 8015634 8015641 chr2R 8017678 8017689 10 2045 50.0 22.5 36.2 0.3 2055 chr2R 8015634 intergenic mir-4981 + chr2R 8016662 intergenic not near genes chr2R 8017689 intergenic not near genes chr2R_10_8015001 chr2R_8015001 RAL-307_100b 1098 chr2R 8015642 8015661 chr2R 8017670 8017709 24 2040 35.5 19.0 27.2 0.9 2067 chr2R 8015642 intergenic mir-4981 + chr2R 8016676 intergenic not near genes chr2R 8017709 intergenic not near genes chr2R_24_8015001 chr2R_8015001 RAL-307_100b 1099 chr2R 8015662 8015683 chr2R 8017669 8017697 24 2038 11.0 18.5 14.8 1.5 2035 chr2R 8015662 intergenic mir-4981 + chr2R 8016680 intergenic not near genes chr2R 8017697 intergenic not near genes chr2R_24_8015001 chr2R_8015001 RAL-307_100b 1100 chr2R 8026785 8026829 chr2R 8026886 8026930 19 99 6.0 8.0 7.0 2.4 145 chr2R 8026785 intergenic CR45267 + chr2R 8026858 intergenic CR45267 + chr2R 8026930 intergenic CR45267 + chr2R_19_8025001 chr2R_8025001 RAL-307_100b 1101 chr2R 8028538 8028598 chr2R 8028644 8028704 63 104 16.5 19.5 18.0 3.3 166 chr2R 8028538 intergenic CR43724 - chr2R 8028621 intergenic CR43724 - chr2R 8028704 intergenic CR43724 - chr2R_63_8025001 chr2R_8025001 RAL-307_100b 1102 chr2R 8144591 8144643 chr2R 8144752 8144804 53 158 11.5 13.0 12.2 4.0 213 chr2R 8144591 intron Lpin - chr2R 8144698 intron Lpin - chr2R 8144804 intron Lpin - chr2R_53_8140001 chr2R_8140001 RAL-307_100b 1103 chr2R 8144644 8144647 chr2R 8144750 8144808 5 148 10.0 11.0 10.5 0.4 164 chr2R 8144644 intron Lpin - chr2R 8144726 intron Lpin - chr2R 8144808 intron Lpin - chr2R_5_8140001 chr2R_8140001 RAL-307_100b 1104 chr2R 8151665 8151715 chr2R 8151768 8151818 34 102 13.5 14.0 13.8 2.3 153 chr2R 8151665 intron,intron Lpin -,kermit - chr2R 8151742 intron,intron Lpin -,kermit - chr2R 8151818 intron,intron Lpin -,kermit - chr2R_34_8150001 chr2R_8150001 RAL-307_100b 1105 chr2R 8152669 8152681 chr2R 8152773 8152791 7 109 19.0 13.5 16.2 0.4 122 chr2R 8152669 intron,intron Lpin -,kermit - chr2R 8152730 intron,intron Lpin -,kermit - chr2R 8152791 intron,intron Lpin -,kermit - chr2R_7_8150001 chr2R_8150001 RAL-307_100b 1106 chr2R 8152684 8152711 chr2R 8152769 8152821 17 106 11.5 12.0 11.8 1.3 137 chr2R 8152684 intron,intron Lpin -,kermit - chr2R 8152752 intron,intron Lpin -,kermit - chr2R 8152821 intron,intron Lpin -,kermit - chr2R_17_8150001 chr2R_8150001 RAL-307_100b 1107 chr2R 8156703 8156755 chr2R 8156805 8156857 32 99 12.0 24.0 18.0 1.7 154 chr2R 8156703 intergenic Lpin -,kermit -,CR44068 + chr2R 8156780 intergenic Lpin -,kermit -,CR44068 + chr2R 8156857 intergenic Lpin -,kermit -,CR44068 + chr2R_32_8155001 chr2R_8155001 RAL-307_100b 1108 chr2R 8160909 8160946 chr2R 8161024 8161061 1360 35 113 21.0 33.5 27.2 1.2 152 chr2R 8160909 exon CG8708 - chr2R 8160985 intron CG8708 - chr2R 8161061 intron CG8708 - chr2R_35_8160001 chr2R_8160001 RAL-307_100b 1109 chr2R 8193789 8193845 chr2R 8193899 8193955 38 109 17.0 8.0 12.5 2.8 166 chr2R 8193789 intron LRP1 + chr2R 8193872 intron LRP1 + chr2R 8193955 intron LRP1 + chr2R_38_8190001 chr2R_8190001 RAL-307_100b 1110 chr2R 8236014 8236050 chr2R 8236120 8236155 18 105 15.0 9.5 12.2 1.4 141 chr2R 8236014 intergenic not near genes chr2R 8236084 intergenic not near genes chr2R 8236155 intergenic not near genes chr2R_18_8235001 chr2R_8235001 RAL-307_100b 1111 chr2R 8243940 8244000 chr2R 8244103 8244152 55 160 11.0 9.0 10.0 5.0 212 chr2R 8243940 intergenic CR44445 - chr2R 8244046 intergenic not near genes chr2R 8244152 intergenic not near genes chr2R_55_8240001 chr2R_8240001 RAL-307_100b 1112 chr2R 8249537 8249573 chr2R 8249644 8249680 24 106 27.0 13.5 20.2 1.1 143 chr2R 8249537 5` UTR CG44439 - chr2R 8249608 intergenic CG44439 - chr2R 8249680 intergenic CG44439 - chr2R_24_8245001 chr2R_8245001 RAL-307_100b 1113 chr2R 8249575 8249598 chr2R 8249642 8249705 13 92 12.5 12.5 12.5 1.0 130 chr2R 8249575 5` UTR CG44439 - chr2R 8249640 intergenic CG44439 - chr2R 8249705 intergenic CG44439 - chr2R_13_8245001 chr2R_8245001 RAL-307_100b 1114 chr2R 8278949 8278953 chr2R 8279154 8279158 6 205 0.0 29.0 14.5 0.4 209 chr2R 8278949 intergenic not near genes chr2R 8279054 intergenic not near genes chr2R 8279158 intergenic not near genes chr2R_6_8275001 chr2R_8275001 RAL-307_100b 1115 chr2R 8278957 8278975 chr2R 8279149 8279180 16 203 0.0 28.0 14.0 1.1 223 chr2R 8278957 intergenic not near genes chr2R 8279068 intergenic not near genes chr2R 8279180 intergenic not near genes chr2R_16_8275001 chr2R_8275001 RAL-307_100b 1116 chr2R 8330837 8330895 chr2R 8331347 8331358 roo 54 505 7.5 13.5 10.5 4.7 521 chr2R 8330837 intron pdm3 + chr2R 8331098 intron pdm3 + chr2R 8331358 intron pdm3 + chr2R_54_8330001 chr2R_8330001 RAL-307_100b 1117 chr2R 8398189 8398223 chr2R 8402995 8403029 Doc 31 4803 21.5 18.0 19.8 1.5 4840 chr2R 8398189 intron CG2121 - chr2R 8400609 intron CG2121 - chr2R 8403029 intron CG2121 - chr2R_31_8400001 chr2R_8400001 RAL-307_100b 1118 chr2R 8398224 8398240 chr2R 8402994 8403046 Doc 14 4796 15.0 18.0 16.5 0.8 4822 chr2R 8398224 intron CG2121 - chr2R 8400635 intron CG2121 - chr2R 8403046 intron CG2121 - chr2R_14_8400001 chr2R_8400001 RAL-307_100b 1119 chr2R 8416293 8416314 chr2R 8417142 8417148 I-element 15 847 20.0 13.0 16.5 0.9 855 chr2R 8416293 intergenic not near genes chr2R 8416720 intergenic CG43296 - chr2R 8417148 intergenic CG43296 - chr2R_15_8415001 chr2R_8415001 RAL-307_100b 1120 chr2R 8489706 8489759 chr2R 8489805 8489863 32 93 13.0 15.0 14.0 2.1 157 chr2R 8489706 intron mtt - chr2R 8489784 intron mtt - chr2R 8489863 intron mtt - chr2R_32_8485001 chr2R_8485001 RAL-307_100b 1121 chr2R 8508752 8508794 chr2R 8508842 8508890 41 104 7.5 13.5 10.5 3.6 138 chr2R 8508752 intron mtt - chr2R 8508821 intron mtt - chr2R 8508890 intron mtt - chr2R_41_8505001 chr2R_8505001 RAL-307_100b 1122 chr2R 8518778 8518779 chr2R 12066249 12066273 4 3547487 60.0 7.0 33.5 0.1 3547495 chr2R 8518778 intron mtt - chr2R 10292526 intron CAP + chr2R 12066273 intron CG8888 - chr2R_4_10290001 chr2R_10290001 RAL-307_100b 1123 chr2R 8518780 8518794 chr2R 12066248 12066286 17 3547491 58.5 7.5 33.0 0.5 3547506 chr2R 8518780 intron mtt - chr2R 10292533 intron CAP + chr2R 12066286 intron CG8888 - chr2R_17_10290001 chr2R_10290001 RAL-307_100b 1124 chr2R 8531894 8531941 chr2R 8532168 8532215 46 273 17.0 12.0 14.5 3.0 321 chr2R 8531894 5` UTR mtt - chr2R 8532054 5` UTR mtt - chr2R 8532215 5` UTR mtt - chr2R_46_8530001 chr2R_8530001 RAL-307_100b 1125 chr2R 8531942 8531948 chr2R 8532166 8532222 10 266 13.5 11.0 12.2 0.8 280 chr2R 8531942 5` UTR mtt - chr2R 8532082 5` UTR mtt - chr2R 8532222 5` UTR mtt - chr2R_10_8530001 chr2R_8530001 RAL-307_100b 1126 chr2R 8635909 8635934 chr2R 8635987 8636028 10 98 0.0 8.5 4.2 1.9 119 chr2R 8635909 intergenic not near genes chr2R 8635968 intergenic not near genes chr2R 8636028 intergenic not near genes chr2R_10_8635001 chr2R_8635001 RAL-307_100b 1127 chr2R 8714706 8714716 chr2R 8714798 8714828 11 107 0.0 20.5 10.2 1.0 122 chr2R 8714706 3` UTR PGRP-SC1b + chr2R 8714767 3` UTR PGRP-SC1b + chr2R 8714828 3` UTR PGRP-SC1b + chr2R_11_8710001 chr2R_8710001 RAL-307_100b 1128 chr2R 8714717 8714723 chr2R 8714774 8714835 14 101 0.0 10.5 5.2 2.3 118 chr2R 8714717 3` UTR PGRP-SC1b + chr2R 8714776 3` UTR PGRP-SC1b + chr2R 8714835 3` UTR PGRP-SC1b + chr2R_14_8710001 chr2R_8710001 RAL-307_100b 1129 chr2R 8722738 8722794 chr2R 8723004 8723038 pogo 57 258 13.5 13.0 13.2 4.0 300 chr2R 8722738 intron CG14767 - chr2R 8722888 intron CG14767 - chr2R 8723038 intron CG14767 - chr2R_57_8720001 chr2R_8720001 RAL-307_100b 1130 chr2R 8777902 8777946 chr2R 8784131 8784175 diver 24 6228 10.5 12.5 11.5 1.9 6273 chr2R 8777902 intergenic not near genes chr2R 8781038 intergenic not near genes chr2R 8784175 intergenic not near genes chr2R_24_8780001 chr2R_8780001 RAL-307_100b 1131 chr2R 8799233 8799286 chr2R 8799403 8799453 47 169 16.0 16.0 16.0 2.8 220 chr2R 8799233 intron sns + chr2R 8799343 intron sns + chr2R 8799453 intron sns + chr2R_47_8795001 chr2R_8795001 RAL-307_100b 1132 chr2R 8822264 8822320 chr2R 8822372 8822419 45 105 11.5 12.5 12.0 3.5 155 chr2R 8822264 intron sns + chr2R 8822342 intron sns + chr2R 8822419 intron sns + chr2R_45_8820001 chr2R_8820001 RAL-307_100b 1133 chr2R 8960429 8960482 chr2R 8960606 8960628 35 173 15.5 14.5 15.0 2.2 199 chr2R 8960429 exon babo + chr2R 8960528 3` UTR babo + chr2R 8960628 3` UTR babo + chr2R_35_8960001 chr2R_8960001 RAL-307_100b 1134 chr2R 8967660 8967706 chr2R 8967802 8967848 20 140 17.0 0.0 8.5 2.1 188 chr2R 8967660 intron CG8216 - chr2R 8967754 intron CG8216 - chr2R 8967848 intron CG8216 - chr2R_20_8965001 chr2R_8965001 RAL-307_100b 1135 chr2R 8969783 8969843 chr2R 8969901 8969960 47 116 14.0 11.5 12.8 3.4 177 chr2R 8969783 3` UTR CG8213 - chr2R 8969872 3` UTR CG8213 - chr2R 8969960 3` UTR CG8213 - chr2R_47_8965001 chr2R_8965001 RAL-307_100b 1136 chr2R 8976586 8976597 chr2R 8976690 8976699 9 104 36.5 22.5 29.5 0.3 113 chr2R 8976586 intron CG8213 - chr2R 8976642 intron CG8213 - chr2R 8976699 intron CG8213 - chr2R_9_8975001 chr2R_8975001 RAL-307_100b 1137 chr2R 8976598 8976639 chr2R 8976685 8976743 47 95 14.5 19.5 17.0 2.6 145 chr2R 8976598 intron CG8213 - chr2R 8976670 intron CG8213 - chr2R 8976743 intron CG8213 - chr2R_47_8975001 chr2R_8975001 RAL-307_100b 1138 chr2R 9047396 9047438 chr2R 9047516 9047529 38 118 9.0 14.0 11.5 3.0 133 chr2R 9047396 intron CG13743 - chr2R 9047462 intron CG13743 - chr2R 9047529 intron CG13743 - chr2R_38_9045001 chr2R_9045001 RAL-307_100b 1139 chr2R 9052680 9052739 chr2R 9052784 9052835 43 103 11.5 17.0 14.2 2.8 155 chr2R 9052680 intron CG13743 - chr2R 9052758 intron CG13743 - chr2R 9052835 intron CG13743 - chr2R_43_9050001 chr2R_9050001 RAL-307_100b 1140 chr2R 9055660 9055676 chr2R 9055990 9056006 11 330 34.0 14.5 24.2 0.4 346 chr2R 9055660 intron CG13743 - chr2R 9055833 intron CG13743 - chr2R 9056006 intron CG13743 - chr2R_11_9055001 chr2R_9055001 RAL-307_100b 1141 chr2R 9055677 9055716 chr2R 9055987 9056046 41 326 15.5 11.5 13.5 2.8 369 chr2R 9055677 intron CG13743 - chr2R 9055862 intron CG13743 - chr2R 9056046 intron CG13743 - chr2R_41_9055001 chr2R_9055001 RAL-307_100b 1142 chr2R 9078457 9078511 chr2R 9078560 9078614 37 103 8.0 12.0 10.0 3.4 157 chr2R 9078457 intergenic CG8083 + chr2R 9078536 intergenic CG8083 + chr2R 9078614 intergenic CG8083 + chr2R_37_9075001 chr2R_9075001 RAL-307_100b 1143 chr2R 9151282 9151334 chr2R 9157771 9157798 Burdock 43 6492 15.0 15.0 15.0 2.7 6516 chr2R 9151282 exon CG30345 + chr2R 9154540 intergenic not near genes chr2R 9157798 intergenic CG8008 - chr2R_43_9150001 chr2R_9150001 RAL-307_100b 1144 chr2R 9212672 9212690 chr2R 9213183 9213201 roo 22 509 36.0 23.5 29.8 0.7 529 chr2R 9212672 intergenic CR45309 + chr2R 9212936 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_22_9210001 chr2R_9210001 RAL-307_100b 1145 chr2R 9212691 9212720 chr2R 9213182 9213231 roo 35 504 20.5 22.5 21.5 1.6 540 chr2R 9212691 intergenic CR45309 + chr2R 9212961 intergenic CR45309 + chr2R 9213231 5` UTR CR45309 + chr2R_35_9210001 chr2R_9210001 RAL-307_100b 1146 chr2R 9227844 9227904 chr2R 9227956 9228016 44 109 17.0 8.0 12.5 3.3 172 chr2R 9227844 3` UTR hig - chr2R 9227930 3` UTR hig - chr2R 9228016 3` UTR hig - chr2R_44_9225001 chr2R_9225001 RAL-307_100b 1147 chr2R 9248022 9248028 chr2R 9248110 9248114 5 97 0.0 26.0 13.0 0.4 92 chr2R 9248022 intergenic not near genes chr2R 9248068 intergenic not near genes chr2R 9248114 intergenic not near genes chr2R_5_9245001 chr2R_9245001 RAL-307_100b 1148 chr2R 9271017 9271059 chr2R 9271119 9271161 17 102 11.0 14.5 12.8 1.2 144 chr2R 9271017 intron Pkn - chr2R 9271089 intron Pkn - chr2R 9271161 intron Pkn - chr2R_17_9270001 chr2R_9270001 RAL-307_100b 1149 chr2R 9325486 9325492 chr2R 9325605 9325606 6 118 0.5 11.5 6.0 0.9 120 chr2R 9325486 intron,intron CG13739 -,CG13954 - chr2R 9325546 intron,intron CG13739 -,CG13954 - chr2R 9325606 intron,intron CG13739 -,CG13954 - chr2R_6_9325001 chr2R_9325001 RAL-307_100b 1150 chr2R 9352252 9352255 chr2R 9361421 9361430 roo 5 9173 23.0 40.5 31.8 0.2 9178 chr2R 9352252 intron CG13954 - chr2R 9356841 intron CG13954 - chr2R 9361430 intron CG13954 - chr2R_5_9355001 chr2R_9355001 RAL-307_100b 1151 chr2R 9352257 9352258 chr2R 9361390 9361433 roo 5 9158 21.0 22.0 21.5 0.2 9176 chr2R 9352257 intron CG13954 - chr2R 9356845 intron CG13954 - chr2R 9361433 intron CG13954 - chr2R_5_9355001 chr2R_9355001 RAL-307_100b 1152 chr2R 9368107 9368149 chr2R 9368205 9368231 33 95 17.5 0.5 9.0 3.3 124 chr2R 9368107 intron CG13954 - chr2R 9368169 intron CG13954 - chr2R 9368231 intron CG13954 - chr2R_33_9365001 chr2R_9365001 RAL-307_100b 1153 chr2R 9368150 9368153 chr2R 9368204 9368229 4 63 14.5 0.5 7.5 0.5 79 chr2R 9368150 intron CG13954 - chr2R 9368190 intron CG13954 - chr2R 9368229 intron CG13954 - chr2R_4_9365001 chr2R_9365001 RAL-307_100b 1154 chr2R 9408203 9408254 chr2R 9408311 9408349 45 107 17.5 20.0 18.8 2.3 146 chr2R 9408203 intron wun - chr2R 9408276 intron wun - chr2R 9408349 intron wun - chr2R_45_9405001 chr2R_9405001 RAL-307_100b 1155 chr2R 9480050 9480099 chr2R 9490606 9490655 roo 29 10555 16.5 12.5 14.5 1.9 10605 chr2R 9480050 intergenic not near genes chr2R 9485352 intergenic not near genes chr2R 9490655 intergenic not near genes chr2R_29_9485001 chr2R_9485001 RAL-307_100b 1156 chr2R 9510638 9510697 chr2R 9510779 9510838 46 136 15.5 14.0 14.8 2.9 200 chr2R 9510638 exon brp + chr2R 9510738 intron brp + chr2R 9510838 exon brp + chr2R_46_9510001 chr2R_9510001 RAL-307_100b 1157 chr2R 9558384 9558442 chr2R 9561319 9561376 70 2938 138.0 118.5 128.2 0.5 2992 chr2R 9558384 intergenic not near genes chr2R 9559880 3` UTR,exon CR45281 -,Or45b + chr2R 9561376 3` UTR CR45281 - chr2R_70_9555001 chr2R_9555001 RAL-307_100b 1158 chr2R 9605808 9605859 chr2R 9605940 9605991 41 130 12.5 19.5 16.0 2.4 183 chr2R 9605808 3` UTR CR44285 - chr2R 9605900 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9605991 5` UTR GstT1 + chr2R_41_9605001 chr2R_9605001 RAL-307_100b 1159 chr2R 9618546 9618567 chr2R 9618799 9618813 16 252 13.0 0.0 6.5 2.1 267 chr2R 9618546 intron Mmp2 - chr2R 9618680 intron Mmp2 - chr2R 9618813 intron Mmp2 - chr2R_16_9615001 chr2R_9615001 RAL-307_100b 1160 chr2R 9687222 9687243 chr2R 9687325 9687350 20 106 27.5 16.5 22.0 0.9 128 chr2R 9687222 intergenic not near genes chr2R 9687286 intergenic not near genes chr2R 9687350 intergenic not near genes chr2R_20_9685001 chr2R_9685001 RAL-307_100b 1161 chr2R 9687245 9687271 chr2R 9687321 9687372 33 103 15.0 16.0 15.5 2.0 127 chr2R 9687245 intergenic not near genes chr2R 9687308 intergenic not near genes chr2R 9687372 intergenic not near genes chr2R_33_9685001 chr2R_9685001 RAL-307_100b 1162 chr2R 9726590 9726642 chr2R 9734168 9734220 17.6 27 7577 12.0 11.0 11.5 2.2 7630 chr2R 9726590 intron sqa - chr2R 9730405 intron sqa - chr2R 9734220 intron sqa - chr2R_27_9730001 chr2R_9730001 RAL-307_100b 1163 chr2R 9776423 9776468 chr2R 9776547 9776592 56 120 16.5 21.0 18.8 2.8 169 chr2R 9776423 intron CG1688 - chr2R 9776508 intron CG1688 - chr2R 9776592 intron CG1688 - chr2R_56_9775001 chr2R_9775001 RAL-307_100b 1164 chr2R 9805398 9805437 chr2R 9805504 9805543 17 105 0.0 10.5 5.2 2.7 145 chr2R 9805398 intron CG1688 - chr2R 9805470 intron CG1688 - chr2R 9805543 intron CG1688 - chr2R_17_9805001 chr2R_9805001 RAL-307_100b 1165 chr2R 9862733 9862793 chr2R 9862834 9862894 55 94 17.0 17.5 17.2 3.0 161 chr2R 9862733 intergenic not near genes chr2R 9862814 intergenic not near genes chr2R 9862894 intergenic not near genes chr2R_55_9860001 chr2R_9860001 RAL-307_100b 1166 chr2R 9871044 9871046 chr2R 9871553 9871557 roo 4 510 6.0 27.0 16.5 0.2 513 chr2R 9871044 intron cbx - chr2R 9871300 intron cbx - chr2R 9871557 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-307_100b 1167 chr2R 9871047 9871073 chr2R 9871534 9871570 roo 30 506 0.5 16.0 8.2 3.3 523 chr2R 9871047 intron cbx - chr2R 9871308 intron cbx - chr2R 9871570 intron,5` UTR cbx -,CG18446 + chr2R_30_9870001 chr2R_9870001 RAL-307_100b 1168 chr2R 9923828 9923888 chr2R 9923935 9923995 54 95 10.5 13.5 12.0 4.2 167 chr2R 9923828 intron Mef2 - chr2R 9923912 intron Mef2 - chr2R 9923995 intron Mef2 - chr2R_54_9920001 chr2R_9920001 RAL-307_100b 1169 chr2R 7071616 7071645 chr2R 9941238 9941244 6 2869602 46.5 81.0 63.8 0.1 2869628 chr2R 7071616 3` UTR CG12831 - chr2R 8506430 intron mtt - chr2R 9941244 intron Mef2 - chr2R_6_8505001 chr2R_8505001 RAL-307_100b 1170 chr2R 9945418 9945424 chr2R 9945634 9945645 BS 4 220 30.0 11.0 20.5 0.2 227 chr2R 9945418 intron Mef2 - chr2R 9945532 intron Mef2 - chr2R 9945645 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-307_100b 1171 chr2R 9945426 9945435 chr2R 9945632 9945645 BS 11 215 25.0 11.0 18.0 0.6 219 chr2R 9945426 intron Mef2 - chr2R 9945536 intron Mef2 - chr2R 9945645 intron Mef2 - chr2R_11_9945001 chr2R_9945001 RAL-307_100b 1172 chr2R 9945437 9945467 chr2R 9945628 9945688 BS 26 213 10.5 9.5 10.0 2.4 251 chr2R 9945437 intron Mef2 - chr2R 9945562 intron Mef2 - chr2R 9945688 intron Mef2 - chr2R_26_9945001 chr2R_9945001 RAL-307_100b 1173 chr2R 10005832 10005872 chr2R 10007015 10007021 1360 37 1182 23.0 19.5 21.2 1.7 1189 chr2R 10005832 intron Pka-R2 - chr2R 10006426 intron Pka-R2 - chr2R 10007021 intron Pka-R2 - chr2R_37_10005001 chr2R_10005001 RAL-307_100b 1174 chr2R 10005873 10005881 chr2R 10007013 10007054 1360 10 1168 18.5 16.5 17.5 0.5 1181 chr2R 10005873 intron Pka-R2 - chr2R 10006464 intron Pka-R2 - chr2R 10007054 intron Pka-R2 - chr2R_10_10005001 chr2R_10005001 RAL-307_100b 1175 chr2R 10122718 10122721 chr2R 10122953 10122956 5 235 24.5 10.0 17.2 0.3 238 chr2R 10122718 intergenic Ccs - chr2R 10122837 intergenic Ccs - chr2R 10122956 intergenic Ccs - chr2R_5_10120001 chr2R_10120001 RAL-307_100b 1176 chr2R 10122723 10122749 chr2R 10122952 10122984 28 234 13.0 9.5 11.2 2.3 261 chr2R 10122723 intergenic Ccs - chr2R 10122854 intergenic Ccs - chr2R 10122984 intergenic Ccs - chr2R_28_10120001 chr2R_10120001 RAL-307_100b 1177 chr2R 10132165 10132217 chr2R 10132270 10132310 41 104 9.0 17.0 13.0 2.9 145 chr2R 10132165 intron gem + chr2R 10132238 intron gem + chr2R 10132310 exon gem + chr2R_41_10130001 chr2R_10130001 RAL-307_100b 1178 chr2R 10168330 10168361 chr2R 10168432 10168453 14 100 15.0 28.5 21.8 0.6 123 chr2R 10168330 intron KCNQ - chr2R 10168392 intron KCNQ - chr2R 10168453 intron KCNQ - chr2R_14_10165001 chr2R_10165001 RAL-307_100b 1179 chr2R 10176103 10176110 chr2R 10176201 10176214 12 104 39.0 17.5 28.2 0.4 111 chr2R 10176103 intron KCNQ - chr2R 10176158 intron KCNQ - chr2R 10176214 intron KCNQ - chr2R_12_10175001 chr2R_10175001 RAL-307_100b 1180 chr2R 10176111 10176154 chr2R 10176199 10176258 41 100 15.0 15.5 15.2 2.5 147 chr2R 10176111 intron KCNQ - chr2R 10176184 intron KCNQ - chr2R 10176258 intron KCNQ - chr2R_41_10175001 chr2R_10175001 RAL-307_100b 1181 chr2R 10176858 10176913 chr2R 10186050 10186105 roo 34 9190 16.0 7.0 11.5 2.7 9247 chr2R 10176858 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186105 intron KCNQ - chr2R_34_10180001 chr2R_10180001 RAL-307_100b 1182 chr2R 10194373 10194402 chr2R 10194543 10194572 22 169 87.5 64.0 75.8 0.3 199 chr2R 10194373 intergenic not near genes chr2R 10194472 intergenic not near genes chr2R 10194572 intergenic not near genes chr2R_22_10190001 chr2R_10190001 RAL-307_100b 1183 chr2R 10197358 10197417 chr2R 10197469 10197528 63 108 56.5 59.5 58.0 1.1 170 chr2R 10197358 3` UTR CG34221 - chr2R 10197443 3` UTR CG34221 - chr2R 10197528 3` UTR CG34221 - chr2R_63_10195001 chr2R_10195001 RAL-307_100b 1184 chr2R 10221192 10221242 chr2R 10221324 10221374 40 131 10.0 14.5 12.2 3.0 182 chr2R 10221192 intron,intron CG12912 -,Hr46 - chr2R 10221283 intron,intron CG12912 -,Hr46 - chr2R 10221374 intron,intron CG12912 -,Hr46 - chr2R_40_10220001 chr2R_10220001 RAL-307_100b 1185 chr2R 10239882 10239935 chr2R 10239985 10240038 20 100 6.0 7.5 6.8 2.6 156 chr2R 10239882 intron Hdc + chr2R 10239960 intron Hdc + chr2R 10240038 intron Hdc + chr2R_20_10235001 chr2R_10235001 RAL-307_100b 1186 chr2R 10257135 10257260 chr2R 10257250 10257504 34 255 0.0 0.0 0.0 34.0 369 chr2R 10257135 intron CG12911 + chr2R 10257320 intron CG12911 + chr2R 10257504 intron CG12911 + chr2R_34_10255001 chr2R_10255001 RAL-307_100b 1187 chr2R 10266474 10266493 chr2R 10266590 10266604 9 113 51.0 11.5 31.2 0.3 130 chr2R 10266474 intron CG12910 + chr2R 10266539 intron CG12910 + chr2R 10266604 intron CG12910 + chr2R_9_10265001 chr2R_10265001 RAL-307_100b 1188 chr2R 10266498 10266506 chr2R 10266586 10266620 10 99 43.0 10.0 26.5 0.4 122 chr2R 10266498 intron CG12910 + chr2R 10266559 intron CG12910 + chr2R 10266620 intron CG12910 + chr2R_10_10265001 chr2R_10265001 RAL-307_100b 1189 chr2R 10266508 10266530 chr2R 10266584 10266601 17 96 23.5 9.5 16.5 1.0 93 chr2R 10266508 intron CG12910 + chr2R 10266554 intron CG12910 + chr2R 10266601 intron CG12910 + chr2R_17_10265001 chr2R_10265001 RAL-307_100b 1190 chr2R 10270542 10270602 chr2R 10270656 10270683 47 112 15.0 14.0 14.5 3.0 141 chr2R 10270542 intron CAP + chr2R 10270612 intron CAP + chr2R 10270683 intron CAP + chr2R_47_10270001 chr2R_10270001 RAL-307_100b 1191 chr2R 10313291 10313349 chr2R 10313404 10313456 55 110 9.5 16.0 12.8 4.0 165 chr2R 10313291 intergenic not near genes chr2R 10313374 intergenic not near genes chr2R 10313456 intergenic Ndg + chr2R_55_10310001 chr2R_10310001 RAL-307_100b 1192 chr2R 10322051 10322080 chr2R 10322158 10322187 18 106 9.5 19.0 14.2 1.2 136 chr2R 10322051 3` UTR Ndg + chr2R 10322119 intergenic Ndg + chr2R 10322187 intergenic Ndg + chr2R_18_10320001 chr2R_10320001 RAL-307_100b 1193 chr2R 10352646 10352704 chr2R 10352748 10352801 50 100 16.0 19.0 17.5 2.7 155 chr2R 10352646 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352724 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352801 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_50_10350001 chr2R_10350001 RAL-307_100b 1194 chr2R 10369970 10370020 chr2R 10370115 10370155 37 142 6.5 13.5 10.0 3.4 185 chr2R 10369970 intron CG42732 - chr2R 10370062 intron CG42732 - chr2R 10370155 intron CG42732 - chr2R_37_10370001 chr2R_10370001 RAL-307_100b 1195 chr2R 10372676 10372682 chr2R 10372783 10372789 9 107 12.0 13.5 12.8 0.7 113 chr2R 10372676 intron CG42732 - chr2R 10372732 intron CG42732 - chr2R 10372789 intron CG42732 - chr2R_9_10370001 chr2R_10370001 RAL-307_100b 1196 chr2R 10409035 10409086 chr2R 10409137 10409187 35 99 0.5 10.0 5.2 5.6 152 chr2R 10409035 intron CG42732 - chr2R 10409111 intron CG42732 - chr2R 10409187 intron,exon CG42732 -,CG33477 - chr2R_35_10405001 chr2R_10405001 RAL-307_100b 1197 chr2R 10454077 10454085 chr2R 10454179 10454187 13 101 50.5 17.0 33.8 0.4 110 chr2R 10454077 intron,intron Galphao +,Cyp49a1 - chr2R 10454132 intron,intron Galphao +,Cyp49a1 - chr2R 10454187 intron,intron Galphao +,Cyp49a1 - chr2R_13_10450001 chr2R_10450001 RAL-307_100b 1198 chr2R 10454086 10454094 chr2R 10454173 10454196 16 97 39.5 15.5 27.5 0.6 110 chr2R 10454086 intron,intron Galphao +,Cyp49a1 - chr2R 10454141 intron,intron Galphao +,Cyp49a1 - chr2R 10454196 intron,intron Galphao +,Cyp49a1 - chr2R_16_10450001 chr2R_10450001 RAL-307_100b 1199 chr2R 10454100 10454130 chr2R 10454172 10454232 34 94 19.5 15.5 17.5 1.8 132 chr2R 10454100 intron,intron Galphao +,Cyp49a1 - chr2R 10454166 intron,intron Galphao +,Cyp49a1 - chr2R 10454232 intron,intron Galphao +,Cyp49a1 - chr2R_34_10450001 chr2R_10450001 RAL-307_100b 1200 chr2R 10468998 10469004 chr2R 10469149 10469155 4 151 32.5 15.0 23.8 0.2 157 chr2R 10468998 intron CG11777 + chr2R 10469076 intron CG11777 + chr2R 10469155 intron CG11777 + chr2R_4_10465001 chr2R_10465001 RAL-307_100b 1201 chr2R 10469006 10469055 chr2R 10469147 10469206 46 149 10.0 14.0 12.0 3.5 200 chr2R 10469006 intron CG11777 + chr2R 10469106 intron CG11777 + chr2R 10469206 exon CG11777 + chr2R_46_10465001 chr2R_10465001 RAL-307_100b 1202 chr2R 10478767 10478825 chr2R 10478869 10478926 23 96 13.0 11.0 12.0 1.8 159 chr2R 10478767 5` UTR CR45134 + chr2R 10478846 intergenic CR45134 +,trsn -,whd - chr2R 10478926 intergenic trsn -,CR45134 +,whd - chr2R_23_10475001 chr2R_10475001 RAL-307_100b 1203 chr2R 10485903 10485924 chr2R 10486007 10486019 10 103 10.5 0.0 5.2 1.6 116 chr2R 10485903 intron lola - chr2R 10485961 intron lola - chr2R 10486019 intron lola - chr2R_10_10485001 chr2R_10485001 RAL-307_100b 1204 chr2R 10506301 10506304 chr2R 10506447 10506458 7 153 3.5 13.5 8.5 0.7 157 chr2R 10506301 intron lola - chr2R 10506380 intron lola - chr2R 10506458 intron lola - chr2R_7_10505001 chr2R_10505001 RAL-307_100b 1205 chr2R 10506305 10506336 chr2R 10506444 10506444 31 150 0.5 12.5 6.5 4.1 139 chr2R 10506305 intron lola - chr2R 10506374 intron lola - chr2R 10506444 intron lola - chr2R_31_10505001 chr2R_10505001 RAL-307_100b 1206 chr2R 10563902 10563924 chr2R 10564118 10564140 13 215 0.0 20.0 10.0 1.2 238 chr2R 10563902 intron psq + chr2R 10564021 intron psq + chr2R 10564140 intron psq + chr2R_13_10560001 chr2R_10560001 RAL-307_100b 1207 chr2R 10571984 10572041 chr2R 10572201 10572258 63 213 10.5 12.5 11.5 5.0 274 chr2R 10571984 intron psq + chr2R 10572121 intron psq + chr2R 10572258 intron psq + chr2R_63_10570001 chr2R_10570001 RAL-307_100b 1208 chr2R 10582095 10582103 chr2R 10582212 10582223 8 120 31.0 0.5 15.8 0.5 128 chr2R 10582095 intron psq + chr2R 10582159 intron psq + chr2R 10582223 intron psq + chr2R_8_10580001 chr2R_10580001 RAL-307_100b 1209 chr2R 10582104 10582146 chr2R 10582211 10582232 38 117 11.5 0.5 6.0 5.4 128 chr2R 10582104 intron psq + chr2R 10582168 intron psq + chr2R 10582232 intron psq + chr2R_38_10580001 chr2R_10580001 RAL-307_100b 1210 chr2R 10585574 10585587 chr2R 10594166 10594193 Tirant 16 8604 15.0 18.0 16.5 0.9 8619 chr2R 10585574 intron psq + chr2R 10589884 intron psq + chr2R 10594193 intron psq + chr2R_16_10585001 chr2R_10585001 RAL-307_100b 1211 chr2R 10608958 10609014 chr2R 10609066 10609109 16 95 9.0 13.0 11.0 1.3 151 chr2R 10608958 intron psq + chr2R 10609034 intron psq + chr2R 10609109 intron psq + chr2R_16_10605001 chr2R_10605001 RAL-307_100b 1212 chr2R 10622326 10622384 chr2R 10637115 10637119 mdg1 31 14783 8.0 14.5 11.2 2.5 14793 chr2R 10622326 intron CG11883 + chr2R 10629722 intron CG11883 + chr2R 10637119 intron CG11883 + chr2R_31_10625001 chr2R_10625001 RAL-307_100b 1213 chr2R 10653176 10653237 chr2R 10653282 10653308 34 98 13.0 8.5 10.8 2.9 132 chr2R 10653176 intergenic not near genes chr2R 10653242 intergenic not near genes chr2R 10653308 intergenic not near genes chr2R_34_10650001 chr2R_10650001 RAL-307_100b 1214 chr2R 10659028 10659052 chr2R 10666668 10666692 mdg1 22 7638 0.0 8.0 4.0 4.4 7664 chr2R 10659028 intergenic not near genes chr2R 10662860 intergenic not near genes chr2R 10666692 intergenic not near genes chr2R_22_10660001 chr2R_10660001 RAL-307_100b 1215 chr2R 10669805 10669851 chr2R 10669910 10669965 20 110 1.5 0.0 0.8 11.1 160 chr2R 10669805 intergenic not near genes chr2R 10669885 intergenic not near genes chr2R 10669965 intergenic not near genes chr2R_20_10665001 chr2R_10665001 RAL-307_100b 1216 chr2R 10671243 10671279 chr2R 10671331 10671343 15 88 16.5 1.0 8.8 1.5 100 chr2R 10671243 intergenic not near genes chr2R 10671293 intergenic not near genes chr2R 10671343 intergenic not near genes chr2R_15_10670001 chr2R_10670001 RAL-307_100b 1217 chr2R 10672718 10672831 chr2R 10672826 10672981 14 132 0.0 0.0 0.0 14.0 263 chr2R 10672718 intergenic not near genes chr2R 10672850 intergenic stan + chr2R 10672981 intergenic stan + chr2R_14_10670001 chr2R_10670001 RAL-307_100b 1218 chr2R 10719105 10719108 chr2R 13316013 13316017 4 2596909 56.0 23.5 39.8 0.1 2596912 chr2R 10719105 intron stan + chr2R 12017561 intron otk - chr2R 13316017 intergenic not near genes chr2R_4_12015001 chr2R_12015001 RAL-307_100b 1219 chr2R 10757669 10757712 chr2R 10757781 10757824 31 107 1.5 15.0 8.2 3.4 155 chr2R 10757669 intron CG33144 - chr2R 10757746 intron CG33144 - chr2R 10757824 intron CG33144 - chr2R_31_10755001 chr2R_10755001 RAL-307_100b 1220 chr2R 10758767 10758787 chr2R 10758891 10758904 8 120 26.5 16.5 21.5 0.4 137 chr2R 10758767 intron CG33144 - chr2R 10758836 intron CG33144 - chr2R 10758904 intron CG33144 - chr2R_8_10755001 chr2R_10755001 RAL-307_100b 1221 chr2R 10758790 10758826 chr2R 10758889 10758911 60 114 12.5 15.0 13.8 4.1 121 chr2R 10758790 intron CG33144 - chr2R 10758850 intron CG33144 - chr2R 10758911 intron CG33144 - chr2R_60_10755001 chr2R_10755001 RAL-307_100b 1222 chr2R 10761530 10761588 chr2R 10761709 10761767 52 177 14.0 11.0 12.5 3.9 237 chr2R 10761530 intron,5` UTR CG33144 -,CR43605 + chr2R 10761648 intron,5` UTR CG33144 -,CR43605 + chr2R 10761767 intron CG33144 - chr2R_52_10760001 chr2R_10760001 RAL-307_100b 1223 chr2R 10790120 10790123 chr2R 10790233 10790236 4 113 38.0 17.0 27.5 0.1 116 chr2R 10790120 intron CG33144 - chr2R 10790178 intron CG33144 - chr2R 10790236 intron CG33144 - chr2R_4_10790001 chr2R_10790001 RAL-307_100b 1224 chr2R 10790124 10790177 chr2R 10790231 10790275 56 109 8.5 17.0 12.8 4.1 151 chr2R 10790124 intron CG33144 - chr2R 10790200 intron CG33144 - chr2R 10790275 intron CG33144 - chr2R_56_10790001 chr2R_10790001 RAL-307_100b 1225 chr2R 10795987 10796006 chr2R 10796094 10796113 18 106 35.5 18.0 26.8 0.6 126 chr2R 10795987 intron CG33144 - chr2R 10796050 intron CG33144 - chr2R 10796113 intron CG33144 - chr2R_18_10795001 chr2R_10795001 RAL-307_100b 1226 chr2R 10796008 10796042 chr2R 10796093 10796142 41 102 19.5 16.5 18.0 2.2 134 chr2R 10796008 intron CG33144 - chr2R 10796075 intron CG33144 - chr2R 10796142 intron CG33144 - chr2R_41_10795001 chr2R_10795001 RAL-307_100b 1227 chr2R 10809353 10809407 chr2R 10809540 10809584 41 185 12.5 13.0 12.8 3.0 231 chr2R 10809353 intergenic CG12935 +,wde - chr2R 10809468 5` UTR CG12935 + chr2R 10809584 5` UTR CG12935 + chr2R_41_10805001 chr2R_10805001 RAL-307_100b 1228 chr2R 10827306 10827362 chr2R 10827419 10827472 51 109 16.0 12.0 14.0 3.4 166 chr2R 10827306 exon CG12325 + chr2R 10827389 3` UTR CG12325 + chr2R 10827472 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_51_10825001 chr2R_10825001 RAL-307_100b 1229 chr2R 10911910 10911963 chr2R 10912021 10912062 62 109 13.0 12.0 12.5 4.6 152 chr2R 10911910 intergenic not near genes chr2R 10911986 intergenic not near genes chr2R 10912062 intergenic not near genes chr2R_62_10910001 chr2R_10910001 RAL-307_100b 1230 chr2R 10913578 10913591 chr2R 10914211 10914219 4 632 34.5 16.0 25.2 0.2 641 chr2R 10913578 intergenic not near genes chr2R 10913898 intergenic not near genes chr2R 10914219 intergenic not near genes chr2R_4_10910001 chr2R_10910001 RAL-307_100b 1231 chr2R 10932475 10932533 chr2R 10932705 10932763 50 226 10.5 10.5 10.5 4.3 288 chr2R 10932475 intergenic not near genes chr2R 10932619 intergenic not near genes chr2R 10932763 intergenic not near genes chr2R_50_10930001 chr2R_10930001 RAL-307_100b 1232 chr2R 10948013 10948020 chr2R 10955581 10955596 17.6 8 7572 6.0 17.0 11.5 0.6 7583 chr2R 10948013 intergenic not near genes chr2R 10951804 intergenic not near genes chr2R 10955596 intergenic not near genes chr2R_8_10950001 chr2R_10950001 RAL-307_100b 1233 chr2R 10948021 10948062 chr2R 10955575 10955628 17.6 37 7571 5.0 14.0 9.5 3.5 7607 chr2R 10948021 intergenic not near genes chr2R 10951824 intergenic not near genes chr2R 10955628 intergenic not near genes chr2R_37_10950001 chr2R_10950001 RAL-307_100b 1234 chr2R 10959068 10959106 chr2R 10959170 10959208 23 102 9.5 12.0 10.8 1.9 140 chr2R 10959068 intergenic not near genes chr2R 10959138 intergenic not near genes chr2R 10959208 intergenic not near genes chr2R_23_10955001 chr2R_10955001 RAL-307_100b 1235 chr2R 10968724 10968783 chr2R 10968829 10968888 40 95 10.5 7.5 9.0 4.0 164 chr2R 10968724 intergenic not near genes chr2R 10968806 intergenic not near genes chr2R 10968888 intergenic not near genes chr2R_40_10965001 chr2R_10965001 RAL-307_100b 1236 chr2R 10974975 10975016 chr2R 10975109 10975124 18 131 12.0 15.0 13.5 1.2 149 chr2R 10974975 intergenic not near genes chr2R 10975050 intergenic not near genes chr2R 10975124 intergenic not near genes chr2R_18_10975001 chr2R_10975001 RAL-307_100b 1237 chr2R 10979667 10979681 chr2R 10980129 10980163 297 14 492 8.0 17.0 12.5 1.0 496 chr2R 10979667 intergenic not near genes chr2R 10979915 intergenic not near genes chr2R 10980163 intergenic not near genes chr2R_14_10975001 chr2R_10975001 RAL-307_100b 1238 chr2R 10989476 10989486 chr2R 10989559 10989590 13 98 4.5 33.5 19.0 0.7 114 chr2R 10989476 intron luna - chr2R 10989533 intron luna - chr2R 10989590 intron luna - chr2R_13_10985001 chr2R_10985001 RAL-307_100b 1239 chr2R 11009794 11009848 chr2R 11018993 11019047 roo 55 9194 20.5 22.0 21.2 2.5 9253 chr2R 11009794 intron luna - chr2R 11014420 intron luna - chr2R 11019047 intron luna - chr2R_55_11010001 chr2R_11010001 RAL-307_100b 1240 chr2R 11019857 11019861 chr2R 11024948 11024952 jockey 4 5090 29.0 14.5 21.8 0.2 5095 chr2R 11019857 intron luna - chr2R 11022404 intron luna - chr2R 11024952 intron luna - chr2R_4_11020001 chr2R_11020001 RAL-307_100b 1241 chr2R 11019864 11019908 chr2R 11024942 11024988 jockey 26 5083 10.0 14.0 12.0 2.0 5124 chr2R 11019864 intron luna - chr2R 11022426 intron luna - chr2R 11024988 intron luna - chr2R_26_11020001 chr2R_11020001 RAL-307_100b 1242 chr2R 11064687 11064738 chr2R 11064795 11064846 45 106 13.5 16.5 15.0 2.8 159 chr2R 11064687 intron luna - chr2R 11064766 intron luna - chr2R 11064846 intron luna - chr2R_45_11060001 chr2R_11060001 RAL-307_100b 1243 chr2R 11097334 11097367 chr2R 11097464 11097495 30 128 19.5 13.5 16.5 1.7 161 chr2R 11097334 intron luna - chr2R 11097414 intron luna - chr2R 11097495 intron luna - chr2R_30_11095001 chr2R_11095001 RAL-307_100b 1244 chr2R 11097368 11097388 chr2R 11097462 11097518 30 119 11.0 12.5 11.8 2.3 150 chr2R 11097368 intron luna - chr2R 11097443 intron luna - chr2R 11097518 intron luna - chr2R_30_11095001 chr2R_11095001 RAL-307_100b 1245 chr2R 11129791 11129847 chr2R 11129899 11129953 51 105 7.5 17.0 12.2 3.9 162 chr2R 11129791 intergenic not near genes chr2R 11129872 intergenic not near genes chr2R 11129953 intergenic not near genes chr2R_51_11125001 chr2R_11125001 RAL-307_100b 1246 chr2R 11134086 11134143 chr2R 11134352 11134409 pogo 35 265 11.0 12.0 11.5 2.8 323 chr2R 11134086 intergenic not near genes chr2R 11134248 intergenic not near genes chr2R 11134409 intergenic not near genes chr2R_35_11130001 chr2R_11130001 RAL-307_100b 1247 chr2R 11156245 11156300 chr2R 11157131 11157185 56 883 9.5 18.0 13.8 3.8 940 chr2R 11156245 intron CG13229 - chr2R 11156715 intron CG13229 - chr2R 11157185 intron CG13229 - chr2R_56_11155001 chr2R_11155001 RAL-307_100b 1248 chr2R 11179249 11179289 chr2R 11179356 11179370 29 108 22.0 26.0 24.0 1.2 121 chr2R 11179249 intron shn + chr2R 11179310 intron shn + chr2R 11179370 intron shn + chr2R_29_11175001 chr2R_11175001 RAL-307_100b 1249 chr2R 11207803 11207827 chr2R 11208015 11208036 BS 27 215 32.0 26.0 29.0 0.9 233 chr2R 11207803 intron shn + chr2R 11207920 intron shn + chr2R 11208036 intron shn + chr2R_27_11205001 chr2R_11205001 RAL-307_100b 1250 chr2R 11207829 11207846 chr2R 11208012 11208064 BS 16 211 21.5 23.5 22.5 0.7 235 chr2R 11207829 intron shn + chr2R 11207946 intron shn + chr2R 11208064 intron shn + chr2R_16_11205001 chr2R_11205001 RAL-307_100b 1251 chr2R 11297616 11297651 chr2R 11301962 11301997 flea 32 4345 10.0 8.0 9.0 3.2 4381 chr2R 11297616 intergenic CG42336 - chr2R 11299806 intergenic not near genes chr2R 11301997 5` UTR CG7741 + chr2R_32_11295001 chr2R_11295001 RAL-307_100b 1252 chr2R 11307534 11307577 chr2R 11307649 11307681 12 113 17.0 0.0 8.5 1.3 147 chr2R 11307534 intergenic Fpps -,CG7745 + chr2R 11307608 intergenic Fpps -,CG7745 + chr2R 11307681 intergenic Fpps -,CG7745 + chr2R_12_11305001 chr2R_11305001 RAL-307_100b 1253 chr2R 11344145 11344148 chr2R 11344266 11344269 4 120 0.0 33.5 16.8 0.2 124 chr2R 11344145 intergenic alphaTry - chr2R 11344207 intergenic alphaTry - chr2R 11344269 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-307_100b 1254 chr2R 11344149 11344159 chr2R 11344253 11344279 12 116 0.0 24.5 12.2 0.9 130 chr2R 11344149 intergenic alphaTry - chr2R 11344214 intergenic alphaTry - chr2R 11344279 3` UTR alphaTry - chr2R_12_11340001 chr2R_11340001 RAL-307_100b 1255 chr2R 11368014 11368041 chr2R 11368115 11368142 13 101 12.0 13.5 12.8 0.9 128 chr2R 11368014 intron CG13204 + chr2R 11368078 intron CG13204 + chr2R 11368142 intron CG13204 + chr2R_13_11365001 chr2R_11365001 RAL-307_100b 1256 chr2R 11404765 11404774 chr2R 11404877 11404886 9 112 30.5 18.0 24.2 0.4 121 chr2R 11404765 intergenic not near genes chr2R 11404826 intergenic not near genes chr2R 11404886 intergenic not near genes chr2R_9_11400001 chr2R_11400001 RAL-307_100b 1257 chr2R 11404775 11404800 chr2R 11404875 11404911 10 109 19.5 17.0 18.2 0.5 136 chr2R 11404775 intergenic not near genes chr2R 11404843 intergenic not near genes chr2R 11404911 intergenic not near genes chr2R_10_11400001 chr2R_11400001 RAL-307_100b 1258 chr2R 11415498 11415510 chr2R 11418671 11418678 opus 5 3173 13.5 22.5 18.0 0.3 3180 chr2R 11415498 intron Drip - chr2R 11417088 intron Drip - chr2R 11418678 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-307_100b 1259 chr2R 11415511 11415550 chr2R 11418665 11418720 opus 42 3167 7.0 19.5 13.2 3.0 3209 chr2R 11415511 intron Drip - chr2R 11417116 intron Drip - chr2R 11418720 intron Drip - chr2R_42_11415001 chr2R_11415001 RAL-307_100b 1260 chr2R 11425654 11425657 chr2R 11425742 11425762 5 101 2.5 21.5 12.0 0.4 108 chr2R 11425654 intron Drip - chr2R 11425708 intron Drip - chr2R 11425762 intron Drip - chr2R_5_11425001 chr2R_11425001 RAL-307_100b 1261 chr2R 11425658 11425674 chr2R 11425741 11425774 19 102 1.5 21.5 11.5 1.5 116 chr2R 11425658 intron Drip - chr2R 11425716 intron Drip - chr2R 11425774 intron Drip - chr2R_19_11425001 chr2R_11425001 RAL-307_100b 1262 chr2R 11425675 11425684 chr2R 11425740 11425789 11 97 1.5 21.5 11.5 0.9 114 chr2R 11425675 intron Drip - chr2R 11425732 intron Drip - chr2R 11425789 intron Drip - chr2R_11_11425001 chr2R_11425001 RAL-307_100b 1263 chr2R 11472627 11472628 chr2R 11473849 11473850 pogo 4 1222 47.5 18.0 32.8 0.1 1223 chr2R 11472627 intergenic not near genes chr2R 11473238 intergenic not near genes chr2R 11473850 intergenic not near genes chr2R_4_11470001 chr2R_11470001 RAL-307_100b 1264 chr2R 11472629 11472637 chr2R 11473846 11473859 pogo 15 1221 42.5 16.5 29.5 0.5 1230 chr2R 11472629 intergenic not near genes chr2R 11473244 intergenic not near genes chr2R 11473859 intergenic not near genes chr2R_15_11470001 chr2R_11470001 RAL-307_100b 1265 chr2R 11472638 11472680 chr2R 11473845 11473901 pogo 43 1219 16.0 16.5 16.2 2.5 1263 chr2R 11472638 intergenic not near genes chr2R 11473270 intergenic not near genes chr2R 11473901 intergenic not near genes chr2R_43_11470001 chr2R_11470001 RAL-307_100b 1266 chr2R 11494575 11494633 chr2R 11494689 11494725 58 110 17.5 15.0 16.2 3.4 150 chr2R 11494575 intron inv + chr2R 11494650 intron inv + chr2R 11494725 intron inv + chr2R_58_11490001 chr2R_11490001 RAL-307_100b 1267 chr2R 11503046 11503090 chr2R 11503280 11503324 25 229 22.0 15.0 18.5 1.3 278 chr2R 11503046 intron inv + chr2R 11503185 intron inv + chr2R 11503324 intron inv + chr2R_25_11500001 chr2R_11500001 RAL-307_100b 1268 chr2R 11547130 11547159 chr2R 11547762 11547801 36 635 18.5 18.0 18.2 1.9 671 chr2R 11547130 intergenic not near genes chr2R 11547466 intergenic not near genes chr2R 11547801 intergenic not near genes chr2R_36_11545001 chr2R_11545001 RAL-307_100b 1269 chr2R 11547161 11547165 chr2R 11547761 11547780 9 623 16.0 17.0 16.5 0.5 619 chr2R 11547161 intergenic not near genes chr2R 11547470 intergenic not near genes chr2R 11547780 intergenic not near genes chr2R_9_11545001 chr2R_11545001 RAL-307_100b 1270 chr2R 11555470 11555492 chr2R 11555611 11555633 15 141 19.5 13.5 16.5 0.9 163 chr2R 11555470 intergenic not near genes chr2R 11555552 intergenic not near genes chr2R 11555633 intergenic not near genes chr2R_15_11555001 chr2R_11555001 RAL-307_100b 1271 chr2R 11555494 11555524 chr2R 11555610 11555665 19 137 7.5 13.5 10.5 1.7 171 chr2R 11555494 intergenic not near genes chr2R 11555580 intergenic not near genes chr2R 11555665 intergenic not near genes chr2R_19_11555001 chr2R_11555001 RAL-307_100b 1272 chr2R 11575030 11575037 chr2R 11575150 11575157 6 120 0.0 19.0 9.5 0.6 127 chr2R 11575030 intergenic not near genes chr2R 11575094 intergenic not near genes chr2R 11575157 intergenic not near genes chr2R_6_11575001 chr2R_11575001 RAL-307_100b 1273 chr2R 11631372 11631412 chr2R 11631477 11631517 40 103 1.5 5.5 3.5 8.9 145 chr2R 11631372 intron CG9005 - chr2R 11631444 intron CG9005 - chr2R 11631517 intron CG9005 - chr2R_40_11630001 chr2R_11630001 RAL-307_100b 1274 chr2R 11672824 11672849 chr2R 11672936 11672961 31 111 12.5 16.0 14.2 2.0 137 chr2R 11672824 intron,exon Roc2 -,Tret1-1 + chr2R 11672892 intron,intron Roc2 -,Tret1-1 + chr2R 11672961 intron,intron Roc2 -,Tret1-1 + chr2R_31_11670001 chr2R_11670001 RAL-307_100b 1275 chr2R 11673818 11673820 chr2R 11677362 11677368 4 3551 38.5 59.5 49.0 0.1 3550 chr2R 11673818 intron,exon Roc2 -,Tret1-1 + chr2R 11675593 intron Roc2 - chr2R 11677368 intron,exon Roc2 -,Tret1-2 + chr2R_4_11675001 chr2R_11675001 RAL-307_100b 1276 chr2R 11673822 11673830 chr2R 11677359 11677366 7 3550 35.0 59.0 47.0 0.1 3544 chr2R 11673822 intron,exon Roc2 -,Tret1-1 + chr2R 11675594 intron Roc2 - chr2R 11677366 intron,intron Roc2 -,Tret1-2 + chr2R_7_11675001 chr2R_11675001 RAL-307_100b 1277 chr2R 11677848 11677865 chr2R 11677951 11677968 14 98 27.0 11.0 19.0 0.7 120 chr2R 11677848 intron,exon Roc2 -,Tret1-2 + chr2R 11677908 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677968 intron,3` UTR Roc2 -,Tret1-2 + chr2R_14_11675001 chr2R_11675001 RAL-307_100b 1278 chr2R 11677866 11677897 chr2R 11677949 11677966 28 96 14.0 10.5 12.2 2.1 100 chr2R 11677866 intron,exon Roc2 -,Tret1-2 + chr2R 11677916 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677966 intron,3` UTR Roc2 -,Tret1-2 + chr2R_28_11675001 chr2R_11675001 RAL-307_100b 1279 chr2R 11733812 11733864 chr2R 11734016 11734066 18 201 11.0 0.5 5.8 2.6 254 chr2R 11733812 intergenic not near genes chr2R 11733939 intergenic not near genes chr2R 11734066 intergenic not near genes chr2R_18_11730001 chr2R_11730001 RAL-307_100b 1280 chr2R 11746475 11746520 chr2R 11746575 11746586 8 100 0.0 0.0 0.0 8.0 111 chr2R 11746475 intergenic not near genes chr2R 11746530 intergenic not near genes chr2R 11746586 intergenic not near genes chr2R_8_11745001 chr2R_11745001 RAL-307_100b 1281 chr2R 11826860 11826917 chr2R 11826997 11827049 32 135 11.5 5.5 8.5 3.4 189 chr2R 11826860 3` UTR CG13192 + chr2R 11826954 3` UTR CG13192 + chr2R 11827049 3` UTR CG13192 + chr2R_32_11825001 chr2R_11825001 RAL-307_100b 1282 chr2R 11839521 11839551 chr2R 11839628 11839648 14 101 43.5 26.5 35.0 0.4 127 chr2R 11839521 5` UTR Sobp - chr2R 11839584 5` UTR Sobp - chr2R 11839648 5` UTR Sobp - chr2R_14_11835001 chr2R_11835001 RAL-307_100b 1283 chr2R 11863833 11863887 chr2R 11863945 11863999 28 110 14.0 6.0 10.0 2.5 166 chr2R 11863833 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11863999 intergenic CG42531 + chr2R_28_11860001 chr2R_11860001 RAL-307_100b 1284 chr2R 11955353 11955378 chr2R 11955457 11955482 25 103 20.5 1.5 11.0 2.1 129 chr2R 11955353 intron CG13188 + chr2R 11955418 intron CG13188 + chr2R 11955482 intron CG13188 + chr2R_25_11955001 chr2R_11955001 RAL-307_100b 1285 chr2R 8518788 8518798 chr2R 12066172 12066175 6 3547375 58.0 56.0 57.0 0.1 3547387 chr2R 8518788 intron mtt - chr2R 10292482 intron CAP + chr2R 12066175 intron CG8888 - chr2R_6_10290001 chr2R_10290001 RAL-307_100b 1286 chr2R 8518782 8518788 chr2R 12066181 12066205 5 3547398 60.0 52.5 56.2 0.1 3547423 chr2R 8518782 intron mtt - chr2R 10292494 intron CAP + chr2R 12066205 intron CG8888 - chr2R_5_10290001 chr2R_10290001 RAL-307_100b 1287 chr2R 12103237 12103260 chr2R 12103530 12103553 13 292 33.0 12.5 22.8 0.5 316 chr2R 12103237 intron jeb - chr2R 12103395 intron jeb - chr2R 12103553 intron jeb - chr2R_13_12100001 chr2R_12100001 RAL-307_100b 1288 chr2R 12103262 12103293 chr2R 12103528 12103575 40 286 15.5 11.5 13.5 2.8 313 chr2R 12103262 intron jeb - chr2R 12103418 intron jeb - chr2R 12103575 intron jeb - chr2R_40_12100001 chr2R_12100001 RAL-307_100b 1289 chr2R 12104655 12104670 chr2R 12104760 12104775 9 105 35.0 16.0 25.5 0.3 120 chr2R 12104655 intron jeb - chr2R 12104715 intron jeb - chr2R 12104775 intron jeb - chr2R_9_12100001 chr2R_12100001 RAL-307_100b 1290 chr2R 12104673 12104702 chr2R 12104758 12104797 26 101 20.5 17.0 18.8 1.3 124 chr2R 12104673 intron jeb - chr2R 12104735 intron jeb - chr2R 12104797 intron jeb - chr2R_26_12100001 chr2R_12100001 RAL-307_100b 1291 chr2R 12185975 12186037 chr2R 12186095 12186140 98 114 16.0 17.5 16.8 5.5 165 chr2R 12185975 intron Cyp6g1 + chr2R 12186058 intron Cyp6g1 + chr2R 12186140 intron Cyp6g1 + chr2R_98_12185001 chr2R_12185001 RAL-307_100b 1292 chr2R 12185223 12185227 chr2R 12188123 12188127 5 2901 98.5 435.0 266.8 0.0 2904 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186675 exon Cyp6g1 + chr2R 12188127 exon Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-307_100b 1293 chr2R 12185222 12185242 chr2R 12188132 12188142 8 2903 106.0 435.5 270.8 0.0 2920 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_8_12185001 chr2R_12185001 RAL-307_100b 1294 chr2R 12189390 12189409 chr2R 12189596 12189625 16 212 398.0 415.5 406.8 0.0 235 chr2R 12189390 exon Cyp6g2 - chr2R 12189508 exon Cyp6g2 - chr2R 12189625 exon Cyp6g2 - chr2R_16_12185001 chr2R_12185001 RAL-307_100b 1295 chr2R 12187474 12187497 chr2R 12190065 12190088 43 2594 373.5 402.5 388.0 0.1 2614 chr2R 12187474 exon Cyp6g1 + chr2R 12188781 exon Cyp6g2 - chr2R 12190088 exon Cyp6g2 - chr2R_43_12185001 chr2R_12185001 RAL-307_100b 1296 chr2R 12187471 12187533 chr2R 12190089 12190124 163 2602 455.0 339.5 397.2 0.4 2653 chr2R 12187471 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_163_12185001 chr2R_12185001 RAL-307_100b 1297 chr2R 12210107 12210164 chr2R 12210213 12210270 56 105 14.0 12.5 13.2 3.9 163 chr2R 12210107 exon Sr-CII - chr2R 12210188 intron Sr-CII - chr2R 12210270 exon Sr-CII - chr2R_56_12210001 chr2R_12210001 RAL-307_100b 1298 chr2R 12236205 12236233 chr2R 12236321 12236339 26 114 19.0 15.5 17.2 1.4 134 chr2R 12236205 intergenic not near genes chr2R 12236272 intergenic not near genes chr2R 12236339 intergenic not near genes chr2R_26_12235001 chr2R_12235001 RAL-307_100b 1299 chr2R 12240737 12240758 chr2R 12240836 12240858 16 99 26.5 0.0 13.2 1.1 121 chr2R 12240737 exon CG13170 + chr2R 12240798 3` UTR CG13170 + chr2R 12240858 intergenic CG13170 +,CG43315 + chr2R_16_12240001 chr2R_12240001 RAL-307_100b 1300 chr2R 12244966 12244975 chr2R 12245070 12245079 8 104 3.0 8.0 5.5 1.2 113 chr2R 12244966 intergenic CG43244 - chr2R 12245022 intergenic CG43244 - chr2R 12245079 intergenic CG43244 - chr2R_8_12245001 chr2R_12245001 RAL-307_100b 1301 chr2R 12255692 12255750 chr2R 12255836 12255879 49 142 12.0 12.5 12.2 3.7 187 chr2R 12255692 3` UTR CG13168 + chr2R 12255786 intergenic CG13168 + chr2R 12255879 intergenic CG13168 + chr2R_49_12255001 chr2R_12255001 RAL-307_100b 1302 chr2R 12279033 12279059 chr2R 12279171 12279197 21 137 7.5 16.0 11.8 1.6 164 chr2R 12279033 intergenic Cam + chr2R 12279115 intergenic Cam + chr2R 12279197 intergenic Cam + chr2R_21_12275001 chr2R_12275001 RAL-307_100b 1303 chr2R 12319773 12319775 chr2R 12320910 12320912 4 1137 22.0 57.0 39.5 0.1 1139 chr2R 12319773 intergenic not near genes chr2R 12320342 intergenic CR44316 - chr2R 12320912 3` UTR CR44316 - chr2R_4_12320001 chr2R_12320001 RAL-307_100b 1304 chr2R 12334868 12334882 chr2R 12334971 12334985 11 102 19.0 25.0 22.0 0.5 117 chr2R 12334868 intergenic CG8490 + chr2R 12334926 intergenic CG8490 + chr2R 12334985 intergenic CG8490 + chr2R_11_12330001 chr2R_12330001 RAL-307_100b 1305 chr2R 12363361 12363388 chr2R 12363818 12363845 36 456 27.5 1.0 14.2 2.4 484 chr2R 12363361 intergenic CG30043 + chr2R 12363603 intergenic CG30043 + chr2R 12363845 intergenic not near genes chr2R_36_12360001 chr2R_12360001 RAL-307_100b 1306 chr2R 12363391 12363415 chr2R 12363811 12363852 19 448 14.5 0.5 7.5 2.2 461 chr2R 12363391 intergenic CG30043 + chr2R 12363622 intergenic CG30043 + chr2R 12363852 intergenic not near genes chr2R_19_12360001 chr2R_12360001 RAL-307_100b 1307 chr2R 12385340 12385376 chr2R 12385438 12385482 41 100 0.5 21.0 10.8 3.5 142 chr2R 12385340 intergenic not near genes chr2R 12385411 intergenic not near genes chr2R 12385482 intergenic not near genes chr2R_41_12385001 chr2R_12385001 RAL-307_100b 1308 chr2R 12481140 12481170 chr2R 12482939 12482982 roo 26 1817 11.5 15.5 13.5 1.8 1842 chr2R 12481140 exon Dh44-R2 + chr2R 12482061 intron Dh44-R2 + chr2R 12482982 intron Dh44-R2 + chr2R_26_12480001 chr2R_12480001 RAL-307_100b 1309 chr2R 12501681 12501724 chr2R 12503850 12503906 Rt1c 24 2177 13.5 22.5 18.0 1.3 2225 chr2R 12501681 intron fdl - chr2R 12502794 intron fdl - chr2R 12503906 intron fdl - chr2R_24_12500001 chr2R_12500001 RAL-307_100b 1310 chr2R 12535981 12535986 chr2R 12536099 12536104 6 117 45.0 21.0 33.0 0.2 123 chr2R 12535981 intron fra + chr2R 12536042 intron fra + chr2R 12536104 intron fra + chr2R_6_12535001 chr2R_12535001 RAL-307_100b 1311 chr2R 12535988 12536035 chr2R 12536096 12536123 63 109 9.0 19.0 14.0 4.2 135 chr2R 12535988 intron fra + chr2R 12536056 intron fra + chr2R 12536123 intron fra + chr2R_63_12535001 chr2R_12535001 RAL-307_100b 1312 chr2R 12565544 12565547 chr2R 12565947 12565949 4 403 0.0 18.5 9.2 0.4 405 chr2R 12565544 intergenic not near genes chr2R 12565746 intergenic Cyp301a1 + chr2R 12565949 intergenic Cyp301a1 + chr2R_4_12565001 chr2R_12565001 RAL-307_100b 1313 chr2R 12565548 12565589 chr2R 12565944 12565963 12 387 0.0 16.5 8.2 1.3 415 chr2R 12565548 intergenic not near genes chr2R 12565756 intergenic Cyp301a1 + chr2R 12565963 intergenic Cyp301a1 + chr2R_12_12565001 chr2R_12565001 RAL-307_100b 1314 chr2R 12565590 12565597 chr2R 12565943 12565971 8 371 0.0 16.5 8.2 0.9 381 chr2R 12565590 intergenic not near genes chr2R 12565780 intergenic Cyp301a1 + chr2R 12565971 intergenic Cyp301a1 + chr2R_8_12565001 chr2R_12565001 RAL-307_100b 1315 chr2R 12700795 12700816 chr2R 12700906 12700914 20 112 32.0 15.5 23.8 0.8 119 chr2R 12700795 3` UTR wuc + chr2R 12700854 intergenic wuc + chr2R 12700914 intergenic wuc + chr2R_20_12700001 chr2R_12700001 RAL-307_100b 1316 chr2R 12700817 12700846 chr2R 12700905 12700965 35 110 17.0 14.5 15.8 2.1 148 chr2R 12700817 3` UTR wuc + chr2R 12700891 intergenic wuc + chr2R 12700965 intergenic wuc + chr2R_35_12700001 chr2R_12700001 RAL-307_100b 1317 chr2R 12707492 12707549 chr2R 12715883 12715940 roo 45 8390 11.0 11.5 11.2 3.7 8448 chr2R 12707492 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715940 intron CG42663 + chr2R_45_12710001 chr2R_12710001 RAL-307_100b 1318 chr2R 12789268 12789328 chr2R 12797656 12797716 roo 37 8384 12.0 13.0 12.5 2.7 8448 chr2R 12789268 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797716 intron,3` UTR sca +,CR45137 - chr2R_37_12790001 chr2R_12790001 RAL-307_100b 1319 chr2R 12819427 12819479 chr2R 12824520 12824573 jockey 32 5091 11.0 14.5 12.8 2.3 5146 chr2R 12819427 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824573 intergenic not near genes chr2R_32_12820001 chr2R_12820001 RAL-307_100b 1320 chr2R 12845391 12845438 chr2R 12845497 12845540 22 103 13.0 7.5 10.2 2.0 149 chr2R 12845391 intergenic CG17575 - chr2R 12845466 intergenic CG17575 - chr2R 12845540 intergenic CG17575 - chr2R_22_12845001 chr2R_12845001 RAL-307_100b 1321 chr2R 12897459 12897465 chr2R 12897570 12897581 8 115 1.5 0.0 0.8 4.4 122 chr2R 12897459 intron vg + chr2R 12897520 intron vg + chr2R 12897581 intron vg + chr2R_8_12895001 chr2R_12895001 RAL-307_100b 1322 chr2R 12897467 12897482 chr2R 12897568 12897588 12 113 1.5 0.0 0.8 6.7 121 chr2R 12897467 intron vg + chr2R 12897528 intron vg + chr2R 12897588 intron vg + chr2R_12_12895001 chr2R_12895001 RAL-307_100b 1323 chr2R 12908485 12908496 chr2R 12908600 12908611 12 115 1.5 15.5 8.5 1.3 126 chr2R 12908485 intergenic not near genes chr2R 12908548 intergenic not near genes chr2R 12908611 intergenic not near genes chr2R_12_12905001 chr2R_12905001 RAL-307_100b 1324 chr2R 13027723 13027742 chr2R 13027827 13027846 7 102 8.0 11.0 9.5 0.7 123 chr2R 13027723 intergenic not near genes chr2R 13027784 intergenic not near genes chr2R 13027846 intergenic not near genes chr2R_7_13025001 chr2R_13025001 RAL-307_100b 1325 chr2R 13028698 13028740 chr2R 13031615 13031664 44 2921 15.0 10.5 12.8 3.2 2966 chr2R 13028698 intergenic not near genes chr2R 13030181 intergenic not near genes chr2R 13031664 intergenic not near genes chr2R_44_13030001 chr2R_13030001 RAL-307_100b 1326 chr2R 13043027 13043061 chr2R 13043132 13043165 14 105 0.0 8.5 4.2 2.7 138 chr2R 13043027 intergenic not near genes chr2R 13043096 intergenic not near genes chr2R 13043165 intergenic not near genes chr2R_14_13040001 chr2R_13040001 RAL-307_100b 1327 chr2R 13089725 13089784 chr2R 13089860 13089919 47 132 14.0 17.0 15.5 2.8 194 chr2R 13089725 intergenic not near genes chr2R 13089822 intergenic not near genes chr2R 13089919 intergenic not near genes chr2R_47_13085001 chr2R_13085001 RAL-307_100b 1328 chr2R 13093315 13093365 chr2R 13093425 13093475 32 109 12.0 9.5 10.8 2.7 160 chr2R 13093315 intergenic not near genes chr2R 13093395 intergenic not near genes chr2R 13093475 intergenic not near genes chr2R_32_13090001 chr2R_13090001 RAL-307_100b 1329 chr2R 13124409 13124467 chr2R 13124708 13124761 67 297 10.5 21.0 15.8 4.0 352 chr2R 13124409 exon CG13325 + chr2R 13124585 exon CG13325 + chr2R 13124761 exon CG13325 + chr2R_67_13120001 chr2R_13120001 RAL-307_100b 1330 chr2R 13136815 13136869 chr2R 13141638 13141670 Doc 53 4818 24.5 18.0 21.2 2.4 4855 chr2R 13136815 exon Cap-G + chr2R 13139242 intron Cap-G + chr2R 13141670 intron Cap-G + chr2R_53_13135001 chr2R_13135001 RAL-307_100b 1331 chr2R 13164780 13164782 chr2R 13164892 13164894 4 112 26.5 0.0 13.2 0.3 114 chr2R 13164780 exon GLaz - chr2R 13164837 intron GLaz - chr2R 13164894 intron GLaz - chr2R_4_13160001 chr2R_13160001 RAL-307_100b 1332 chr2R 13167406 13167457 chr2R 13167525 13167545 40 116 16.5 0.0 8.2 4.3 139 chr2R 13167406 intron GLaz - chr2R 13167476 intron GLaz - chr2R 13167545 intron GLaz - chr2R_40_13165001 chr2R_13165001 RAL-307_100b 1333 chr2R 13194830 13194853 chr2R 13194951 13194955 9 119 39.0 29.0 34.0 0.3 125 chr2R 13194830 intergenic not near genes chr2R 13194892 intergenic not near genes chr2R 13194955 intergenic not near genes chr2R_9_13190001 chr2R_13190001 RAL-307_100b 1334 chr2R 13220537 13220540 chr2R 13220638 13220644 4 103 1.5 21.0 11.2 0.3 107 chr2R 13220537 intron CG17059 + chr2R 13220590 intron CG17059 + chr2R 13220644 intron CG17059 + chr2R_4_13220001 chr2R_13220001 RAL-307_100b 1335 chr2R 13220546 13220565 chr2R 13220611 13220657 21 97 1.0 8.0 4.5 3.8 111 chr2R 13220546 intron CG17059 + chr2R 13220602 intron CG17059 + chr2R 13220657 intron CG17059 + chr2R_21_13220001 chr2R_13220001 RAL-307_100b 1336 chr2R 13305474 13305511 chr2R 13305581 13305618 42 104 26.0 20.0 23.0 1.8 144 chr2R 13305474 intergenic not near genes chr2R 13305546 intergenic not near genes chr2R 13305618 intergenic not near genes chr2R_42_13305001 chr2R_13305001 RAL-307_100b 1337 chr2R 13309647 13309652 chr2R 13309790 13309795 5 143 22.5 17.5 20.0 0.2 148 chr2R 13309647 intergenic not near genes chr2R 13309721 intergenic not near genes chr2R 13309795 intergenic not near genes chr2R_5_13305001 chr2R_13305001 RAL-307_100b 1338 chr2R 13309653 13309658 chr2R 13309786 13309801 7 141 22.0 13.5 17.8 0.4 148 chr2R 13309653 intergenic not near genes chr2R 13309727 intergenic not near genes chr2R 13309801 intergenic not near genes chr2R_7_13305001 chr2R_13305001 RAL-307_100b 1339 chr2R 13309659 13309681 chr2R 13309780 13309824 14 141 10.0 10.0 10.0 1.3 165 chr2R 13309659 intergenic not near genes chr2R 13309742 intergenic not near genes chr2R 13309824 intergenic not near genes chr2R_14_13305001 chr2R_13305001 RAL-307_100b 1340 chr2R 10719105 10719108 chr2R 13315862 13315873 4 2596759 56.0 34.0 45.0 0.1 2596768 chr2R 10719105 intron stan + chr2R 12017489 intron otk - chr2R 13315873 intergenic not near genes chr2R_4_12015001 chr2R_12015001 RAL-307_100b 1341 chr2R 13364700 13364733 chr2R 13364811 13364844 29 110 12.5 23.5 18.0 1.5 144 chr2R 13364700 intergenic not near genes chr2R 13364772 intergenic not near genes chr2R 13364844 intergenic not near genes chr2R_29_13360001 chr2R_13360001 RAL-307_100b 1342 chr2R 13376629 13376638 chr2R 13376764 13376773 10 134 10.5 20.0 15.2 0.6 144 chr2R 13376629 intron CG10814 - chr2R 13376701 intron CG10814 - chr2R 13376773 intron CG10814 - chr2R_10_13375001 chr2R_13375001 RAL-307_100b 1343 chr2R 13403896 13403937 chr2R 13404006 13404047 38 109 11.0 4.5 7.8 4.3 151 chr2R 13403896 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404047 intergenic not near genes chr2R_38_13400001 chr2R_13400001 RAL-307_100b 1344 chr2R 13431464 13431477 chr2R 13431568 13431581 9 104 28.5 10.5 19.5 0.4 117 chr2R 13431464 intron CG42321 - chr2R 13431522 intron CG42321 - chr2R 13431581 intron CG42321 - chr2R_9_13430001 chr2R_13430001 RAL-307_100b 1345 chr2R 13431479 13431519 chr2R 13431567 13431623 32 102 12.5 9.0 10.8 2.7 144 chr2R 13431479 intron CG42321 - chr2R 13431551 intron CG42321 - chr2R 13431623 intron CG42321 - chr2R_32_13430001 chr2R_13430001 RAL-307_100b 1346 chr2R 13438862 13438863 chr2R 13440155 13440167 14 1294 67.5 124.0 95.8 0.1 1305 chr2R 13438862 5` UTR CG42321 - chr2R 13439514 3` UTR cnn - chr2R 13440167 exon cnn - chr2R_14_13435001 chr2R_13435001 RAL-307_100b 1347 chr2R 13438860 13438921 chr2R 13440168 13440214 26 1300 73.5 120.5 97.0 0.3 1354 chr2R 13438860 5` UTR CG42321 - chr2R 13439537 3` UTR cnn - chr2R 13440214 exon cnn - chr2R_26_13435001 chr2R_13435001 RAL-307_100b 1348 chr2R 13464448 13464450 chr2R 13464604 13464606 4 156 47.0 20.5 33.8 0.1 158 chr2R 13464448 intron arr - chr2R 13464527 intron arr - chr2R 13464606 intron arr - chr2R_4_13460001 chr2R_13460001 RAL-307_100b 1349 chr2R 13464452 13464499 chr2R 13464603 13464655 59 151 14.0 19.5 16.8 3.3 203 chr2R 13464452 intron arr - chr2R 13464554 intron arr - chr2R 13464655 intron arr - chr2R_59_13460001 chr2R_13460001 RAL-307_100b 1350 chr2R 13522086 13522097 chr2R 13522187 13522189 4 99 26.0 3.0 14.5 0.3 103 chr2R 13522086 intron,exon Vmat -,CG13331 + chr2R 13522138 intron,intron Vmat -,CG13331 + chr2R 13522189 intron,intron Vmat -,CG13331 + chr2R_4_13520001 chr2R_13520001 RAL-307_100b 1351 chr2R 13532495 13532529 chr2R 13532636 13532670 26 140 14.0 12.0 13.0 1.9 175 chr2R 13532495 intron Vmat - chr2R 13532582 intron Vmat - chr2R 13532670 intron Vmat - chr2R_26_13530001 chr2R_13530001 RAL-307_100b 1352 chr2R 13540381 13540421 chr2R 13540650 13540696 24 274 2.0 15.5 8.8 2.4 315 chr2R 13540381 intron CG6145 - chr2R 13540538 intron CG6145 - chr2R 13540696 intron CG6145 - chr2R_24_13540001 chr2R_13540001 RAL-307_100b 1353 chr2R 13554767 13554771 chr2R 13554852 13554881 7 105 0.0 30.0 15.0 0.4 114 chr2R 13554767 intron Roe1 + chr2R 13554824 intron Roe1 + chr2R 13554881 intron Roe1 + chr2R_7_13550001 chr2R_13550001 RAL-307_100b 1354 chr2R 13554772 13554774 chr2R 13554851 13554874 5 102 0.0 29.5 14.8 0.3 102 chr2R 13554772 intron Roe1 + chr2R 13554823 intron Roe1 + chr2R 13554874 intron Roe1 + chr2R_5_13550001 chr2R_13550001 RAL-307_100b 1355 chr2R 13568151 13568192 chr2R 13568259 13568298 9 106 14.5 7.0 10.8 0.8 147 chr2R 13568151 intergenic not near genes chr2R 13568224 intergenic not near genes chr2R 13568298 intergenic not near genes chr2R_9_13565001 chr2R_13565001 RAL-307_100b 1356 chr2R 13577413 13577416 chr2R 13577515 13577518 4 102 16.0 14.0 15.0 0.2 105 chr2R 13577413 5` UTR CR44365 + chr2R 13577466 5` UTR CR44365 + chr2R 13577518 5` UTR CR44365 + chr2R_4_13575001 chr2R_13575001 RAL-307_100b 1357 chr2R 13577417 13577466 chr2R 13577509 13577568 43 98 11.5 14.5 13.0 3.1 151 chr2R 13577417 5` UTR CR44365 + chr2R 13577492 5` UTR CR44365 + chr2R 13577568 intergenic CR44365 +,CR44366 + chr2R_43_13575001 chr2R_13575001 RAL-307_100b 1358 chr2R 13580481 13580525 chr2R 13580848 13580900 jockey 46 371 1.5 9.0 5.2 7.4 419 chr2R 13580481 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580900 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_46_13580001 chr2R_13580001 RAL-307_100b 1359 chr2R 13649999 13650010 chr2R 13650119 13650119 4 117 90.0 66.5 78.2 0.1 120 chr2R 13649999 intron fas + chr2R 13650059 intron fas + chr2R 13650119 intron fas + chr2R_4_13650001 chr2R_13650001 RAL-307_100b 1360 chr2R 13652682 13652739 chr2R 13652786 13652843 46 99 13.5 11.5 12.5 3.4 161 chr2R 13652682 intron fas + chr2R 13652762 intron fas + chr2R 13652843 intron fas + chr2R_46_13650001 chr2R_13650001 RAL-307_100b 1361 chr2R 13658063 13658068 chr2R 13658167 13658173 4 104 37.0 24.0 30.5 0.1 110 chr2R 13658063 intron fas + chr2R 13658118 intron fas + chr2R 13658173 intron fas + chr2R_4_13655001 chr2R_13655001 RAL-307_100b 1362 chr2R 13658072 13658109 chr2R 13658166 13658198 22 92 15.5 24.0 19.8 1.1 126 chr2R 13658072 intron fas + chr2R 13658135 intron fas + chr2R 13658198 intron fas + chr2R_22_13655001 chr2R_13655001 RAL-307_100b 1363 chr2R 13677853 13677858 chr2R 13677958 13677963 5 105 12.0 35.0 23.5 0.2 110 chr2R 13677853 intron fas + chr2R 13677908 intron fas + chr2R 13677963 intron fas + chr2R_5_13675001 chr2R_13675001 RAL-307_100b 1364 chr2R 13709821 13709852 chr2R 13709939 13709957 29 115 14.5 31.0 22.8 1.2 136 chr2R 13709821 intron fas + chr2R 13709889 intron fas + chr2R 13709957 intron fas + chr2R_29_13705001 chr2R_13705001 RAL-307_100b 1365 chr2R 13721190 13721229 chr2R 13721289 13721317 34 100 26.5 18.5 22.5 1.4 127 chr2R 13721190 intron fas + chr2R 13721254 intron fas + chr2R 13721317 intron fas + chr2R_34_13720001 chr2R_13720001 RAL-307_100b 1366 chr2R 13728110 13728160 chr2R 13735792 13735842 opus 46 7681 15.0 13.5 14.2 3.0 7732 chr2R 13728110 intron fas + chr2R 13731976 intron fas + chr2R 13735842 intron fas + chr2R_46_13730001 chr2R_13730001 RAL-307_100b 1367 chr2R 13768956 13769008 chr2R 13769080 13769132 53 120 20.5 24.5 22.5 2.3 176 chr2R 13768956 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769132 intergenic not near genes chr2R_53_13765001 chr2R_13765001 RAL-307_100b 1368 chr2R 13817640 13817692 chr2R 13817739 13817799 24 102 7.0 0.0 3.5 5.3 159 chr2R 13817640 intron stj + chr2R 13817720 intron stj + chr2R 13817799 intron stj + chr2R_24_13815001 chr2R_13815001 RAL-307_100b 1369 chr2R 13868885 13868929 chr2R 13868974 13869033 42 101 5.0 16.0 10.5 3.7 148 chr2R 13868885 intron shot - chr2R 13868959 intron shot - chr2R 13869033 intron shot - chr2R_42_13865001 chr2R_13865001 RAL-307_100b 1370 chr2R 13905575 13905637 chr2R 13907582 13907604 Rt1a 33 2000 1.0 16.5 8.8 3.4 2029 chr2R 13905575 intron shot - chr2R 13906590 intron shot - chr2R 13907604 intron shot - chr2R_33_13905001 chr2R_13905001 RAL-307_100b 1371 chr2R 13925825 13925872 chr2R 13926026 13926073 48 199 16.0 14.5 15.2 3.0 248 chr2R 13925825 intron shot - chr2R 13925949 intron shot - chr2R 13926073 intron shot - chr2R_48_13925001 chr2R_13925001 RAL-307_100b 1372 chr2R 13940670 13940676 chr2R 13940816 13940822 4 146 33.5 12.0 22.8 0.2 152 chr2R 13940670 intron shot - chr2R 13940746 intron shot - chr2R 13940822 intron shot - chr2R_4_13940001 chr2R_13940001 RAL-307_100b 1373 chr2R 13940678 13940722 chr2R 13940813 13940868 39 143 13.5 9.0 11.2 3.2 190 chr2R 13940678 intron shot - chr2R 13940773 intron shot - chr2R 13940868 intron shot - chr2R_39_13940001 chr2R_13940001 RAL-307_100b 1374 chr2R 13995227 13995240 chr2R 13995329 13995352 8 111 0.0 41.0 20.5 0.4 125 chr2R 13995227 intron mam + chr2R 13995290 intron mam + chr2R 13995352 intron mam + chr2R_8_13995001 chr2R_13995001 RAL-307_100b 1375 chr2R 14050826 14050855 chr2R 14050940 14050964 31 112 26.0 28.5 27.2 1.1 138 chr2R 14050826 intron mam + chr2R 14050895 intron mam + chr2R 14050964 intron mam + chr2R_31_14050001 chr2R_14050001 RAL-307_100b 1376 chr2R 14054046 14054075 chr2R 14054149 14054171 18 100 31.0 15.5 23.2 0.7 125 chr2R 14054046 intron mam + chr2R 14054108 intron mam + chr2R 14054171 intron mam + chr2R_18_14050001 chr2R_14050001 RAL-307_100b 1377 chr2R 14054076 14054081 chr2R 14054144 14054154 4 84 28.0 15.0 21.5 0.2 78 chr2R 14054076 intron mam + chr2R 14054115 intron mam + chr2R 14054154 intron mam + chr2R_4_14050001 chr2R_14050001 RAL-307_100b 1378 chr2R 14093407 14093428 chr2R 14109584 14109590 13 16174 18.0 3.0 10.5 1.1 16183 chr2R 14093407 intron Prosap - chr2R 14101498 intron Prosap - chr2R 14109590 intron Prosap - chr2R_13_14100001 chr2R_14100001 RAL-307_100b 1379 chr2R 14118951 14118969 chr2R 14119056 14119066 14 102 14.0 17.0 15.5 0.8 115 chr2R 14118951 intron Prosap - chr2R 14119008 intron Prosap - chr2R 14119066 intron Prosap - chr2R_14_14115001 chr2R_14115001 RAL-307_100b 1380 chr2R 14168341 14168396 chr2R 14168455 14168510 31 113 10.5 10.0 10.2 2.8 169 chr2R 14168341 intergenic CG18327 +,CG18324 + chr2R 14168426 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168510 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_31_14165001 chr2R_14165001 RAL-307_100b 1381 chr2R 14266735 14266795 chr2R 14266836 14266869 82 97 25.0 26.0 25.5 3.1 134 chr2R 14266735 intron CG8547 - chr2R 14266802 intron CG8547 - chr2R 14266869 intron CG8547 - chr2R_82_14265001 chr2R_14265001 RAL-307_100b 1382 chr2R 14277554 14277611 chr2R 14277661 14277705 52 104 13.5 18.0 15.8 3.1 151 chr2R 14277554 5` UTR Ih + chr2R 14277630 5` UTR Ih + chr2R 14277705 5` UTR Ih + chr2R_52_14275001 chr2R_14275001 RAL-307_100b 1383 chr2R 14285034 14285050 chr2R 14285140 14285158 6 108 4.0 15.5 9.8 0.6 124 chr2R 14285034 intron Ih + chr2R 14285096 intron Ih + chr2R 14285158 intron Ih + chr2R_6_14285001 chr2R_14285001 RAL-307_100b 1384 chr2R 14306086 14306139 chr2R 14306187 14306240 42 99 10.0 13.5 11.8 3.3 154 chr2R 14306086 intergenic not near genes chr2R 14306163 intergenic not near genes chr2R 14306240 intergenic not near genes chr2R_42_14305001 chr2R_14305001 RAL-307_100b 1385 chr2R 14322737 14322768 chr2R 14322852 14322883 11 113 3.5 13.0 8.2 1.2 146 chr2R 14322737 intron Shroom + chr2R 14322810 intron Shroom + chr2R 14322883 intron Shroom + chr2R_11_14320001 chr2R_14320001 RAL-307_100b 1386 chr2R 14357530 14357576 chr2R 14357645 14357689 25 114 13.0 23.0 18.0 1.3 159 chr2R 14357530 intergenic CG8617 -,Arc1 - chr2R 14357610 intergenic Arc1 -,CG8617 - chr2R 14357689 intergenic Arc1 -,CG8617 - chr2R_25_14355001 chr2R_14355001 RAL-307_100b 1387 chr2R 14394210 14394233 chr2R 14399024 14399037 Doc 13 4813 26.0 14.0 20.0 0.6 4827 chr2R 14394210 intergenic not near genes chr2R 14396624 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_13_14395001 chr2R_14395001 RAL-307_100b 1388 chr2R 14467281 14467284 chr2R 14476464 14476467 roo 4 9183 16.5 26.0 21.2 0.2 9186 chr2R 14467281 intergenic not near genes chr2R 14471874 intergenic not near genes chr2R 14476467 5` UTR CR44462 + chr2R_4_14470001 chr2R_14470001 RAL-307_100b 1389 chr2R 14467285 14467327 chr2R 14476463 14476510 roo 43 9180 5.5 25.0 15.2 2.7 9225 chr2R 14467285 intergenic not near genes chr2R 14471898 intergenic not near genes chr2R 14476510 5` UTR CR44462 + chr2R_43_14470001 chr2R_14470001 RAL-307_100b 1390 chr2R 14497362 14497421 chr2R 14498550 14498592 1360 37 1187 0.0 10.5 5.2 6.0 1230 chr2R 14497362 3` UTR Cpsf160 - chr2R 14497977 intron Cpsf160 - chr2R 14498592 3` UTR Cpsf160 - chr2R_37_14495001 chr2R_14495001 RAL-307_100b 1391 chr2R 14514460 14514499 chr2R 14514578 14514617 35 117 21.0 11.0 16.0 2.1 157 chr2R 14514460 intron,intron Cpr51A -,CG30197 + chr2R 14514538 intron,intron Cpr51A -,CG30197 + chr2R 14514617 intron,intron Cpr51A -,CG30197 + chr2R_35_14510001 chr2R_14510001 RAL-307_100b 1392 chr2R 14530340 14530376 chr2R 14530454 14530489 20 111 24.5 12.5 18.5 1.0 149 chr2R 14530340 intron ttv + chr2R 14530414 intron ttv + chr2R 14530489 intron ttv + chr2R_20_14530001 chr2R_14530001 RAL-307_100b 1393 chr2R 14533753 14533785 chr2R 14533860 14533891 17 106 11.5 6.5 9.0 1.7 138 chr2R 14533753 intron ttv + chr2R 14533822 intron ttv + chr2R 14533891 intron ttv + chr2R_17_14530001 chr2R_14530001 RAL-307_100b 1394 chr2R 14565536 14565593 chr2R 14565638 14565684 50 100 17.5 18.5 18.0 2.6 148 chr2R 14565536 intron ttv + chr2R 14565610 intron ttv + chr2R 14565684 intron ttv + chr2R_50_14565001 chr2R_14565001 RAL-307_100b 1395 chr2R 14653858 14653917 chr2R 14653967 14654011 63 93 17.0 13.0 15.0 3.9 153 chr2R 14653858 intergenic not near genes chr2R 14653934 intergenic not near genes chr2R 14654011 intergenic not near genes chr2R_63_14650001 chr2R_14650001 RAL-307_100b 1396 chr2R 14722287 14722301 chr2R 14722416 14722430 9 129 8.0 32.5 20.2 0.4 143 chr2R 14722287 intergenic not near genes chr2R 14722358 intergenic not near genes chr2R 14722430 intergenic not near genes chr2R_9_14720001 chr2R_14720001 RAL-307_100b 1397 chr2R 14722849 14722906 chr2R 14722979 14723011 28 127 13.5 0.5 7.0 3.5 162 chr2R 14722849 intergenic not near genes chr2R 14722930 intergenic not near genes chr2R 14723011 intergenic not near genes chr2R_28_14720001 chr2R_14720001 RAL-307_100b 1398 chr2R 14733368 14733391 chr2R 14733481 14733494 20 111 34.0 9.5 21.8 0.9 126 chr2R 14733368 intergenic not near genes chr2R 14733431 intergenic not near genes chr2R 14733494 intergenic not near genes chr2R_20_14730001 chr2R_14730001 RAL-307_100b 1399 chr2R 14733392 14733426 chr2R 14733480 14733539 22 103 16.0 9.5 12.8 1.6 147 chr2R 14733392 intergenic not near genes chr2R 14733466 intergenic not near genes chr2R 14733539 intergenic not near genes chr2R_22_14730001 chr2R_14730001 RAL-307_100b 1400 chr2R 14737101 14737142 chr2R 14737198 14737243 35 101 17.0 12.0 14.5 2.3 142 chr2R 14737101 intergenic CR43428 - chr2R 14737172 intergenic CR43428 - chr2R 14737243 intergenic CR43428 - chr2R_35_14735001 chr2R_14735001 RAL-307_100b 1401 chr2R 14737143 14737151 chr2R 14737196 14737239 13 90 15.0 12.0 13.5 0.9 96 chr2R 14737143 intergenic CR43428 - chr2R 14737191 intergenic CR43428 - chr2R 14737239 intergenic CR43428 - chr2R_13_14735001 chr2R_14735001 RAL-307_100b 1402 chr2R 14748154 14748220 chr2R 14748490 14748548 10 331 0.0 7.0 3.5 2.2 394 chr2R 14748154 3` UTR AttA + chr2R 14748351 intergenic AttA + chr2R 14748548 intergenic AttA + chr2R_10_14745001 chr2R_14745001 RAL-307_100b 1403 chr2R 14748837 14748891 chr2R 14748961 14748976 28 122 12.0 8.5 10.2 2.5 139 chr2R 14748837 intergenic AttB + chr2R 14748906 intergenic AttB + chr2R 14748976 intergenic AttB + chr2R_28_14745001 chr2R_14745001 RAL-307_100b 1404 chr2R 14797572 14797575 chr2R 14797699 14797701 6 126 13.0 4.0 8.5 0.6 129 chr2R 14797572 intron kn - chr2R 14797636 intron kn - chr2R 14797701 intron kn - chr2R_6_14795001 chr2R_14795001 RAL-307_100b 1405 chr2R 14797576 14797630 chr2R 14797697 14797740 32 114 0.0 3.0 1.5 12.8 164 chr2R 14797576 intron kn - chr2R 14797658 intron kn - chr2R 14797740 intron kn - chr2R_32_14795001 chr2R_14795001 RAL-307_100b 1406 chr2R 14826373 14826387 chr2R 14826502 14826513 9 129 7.5 8.0 7.8 1.0 140 chr2R 14826373 intergenic not near genes chr2R 14826443 intergenic not near genes chr2R 14826513 intergenic not near genes chr2R_9_14825001 chr2R_14825001 RAL-307_100b 1407 chr2R 14842366 14842394 chr2R 14842487 14842505 13 120 14.0 13.5 13.8 0.9 139 chr2R 14842366 intergenic NaPi-T - chr2R 14842436 intergenic NaPi-T - chr2R 14842505 intergenic NaPi-T - chr2R_13_14840001 chr2R_14840001 RAL-307_100b 1408 chr2R 14850031 14850045 chr2R 14850162 14850176 16 130 115.5 91.5 103.5 0.2 145 chr2R 14850031 exon SMC2 - chr2R 14850104 exon SMC2 - chr2R 14850176 exon SMC2 - chr2R_16_14850001 chr2R_14850001 RAL-307_100b 1409 chr2R 14850046 14850088 chr2R 14850161 14850214 50 127 86.5 90.5 88.5 0.6 168 chr2R 14850046 exon SMC2 - chr2R 14850130 intron SMC2 - chr2R 14850214 exon SMC2 - chr2R_50_14850001 chr2R_14850001 RAL-307_100b 1410 chr2R 14855003 14855162 chr2R 14855121 14855290 15 115 0.5 0.5 0.5 10.0 287 chr2R 14855003 5` UTR Ciao1 - chr2R 14855146 intergenic Ciao1 -,HPS1 + chr2R 14855290 intergenic HPS1 +,Ciao1 - chr2R_15_14855001 chr2R_14855001 RAL-307_100b 1411 chr2R 14889188 14889192 chr2R 14897821 14897825 Max-element 8 8632 43.5 2.0 22.8 0.3 8637 chr2R 14889188 intergenic Cyp6a8 - chr2R 14893506 intergenic not near genes chr2R 14897825 intergenic not near genes chr2R_8_14890001 chr2R_14890001 RAL-307_100b 1412 chr2R 14889193 14889232 chr2R 14897816 14897842 Max-element 27 8626 19.0 2.0 10.5 2.3 8649 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897842 intergenic not near genes chr2R_27_14890001 chr2R_14890001 RAL-307_100b 1413 chr2R 14906464 14906512 chr2R 14906597 14906647 43 133 13.0 16.0 14.5 2.8 183 chr2R 14906464 intron CG10249 - chr2R 14906556 intron CG10249 - chr2R 14906647 intron CG10249 - chr2R_43_14905001 chr2R_14905001 RAL-307_100b 1414 chr2R 14911675 14911728 chr2R 14911823 14911840 51 146 11.0 13.0 12.0 3.9 165 chr2R 14911675 intron CG10249 - chr2R 14911758 intron CG10249 - chr2R 14911840 intron CG10249 - chr2R_51_14910001 chr2R_14910001 RAL-307_100b 1415 chr2R 14917822 14917882 chr2R 14917932 14917976 51 109 13.0 16.0 14.5 3.3 154 chr2R 14917822 intron CG10249 - chr2R 14917899 intron CG10249 - chr2R 14917976 intron CG10249 - chr2R_51_14915001 chr2R_14915001 RAL-307_100b 1416 chr2R 14919069 14919089 chr2R 14919175 14919185 9 104 21.5 0.5 11.0 0.8 116 chr2R 14919069 intron CG10249 - chr2R 14919127 intron CG10249 - chr2R 14919185 intron CG10249 - chr2R_9_14915001 chr2R_14915001 RAL-307_100b 1417 chr2R 14922116 14922174 chr2R 14922217 14922275 60 97 14.0 12.0 13.0 4.3 159 chr2R 14922116 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922275 intron CG10249 - chr2R_60_14920001 chr2R_14920001 RAL-307_100b 1418 chr2R 14985431 14985481 chr2R 14985527 14985582 49 95 1.0 12.0 6.5 6.5 151 chr2R 14985431 intron pcs + chr2R 14985506 intron pcs + chr2R 14985582 intron pcs + chr2R_49_14985001 chr2R_14985001 RAL-307_100b 1419 chr2R 14998491 14998512 chr2R 14998656 14998677 18 164 12.5 16.0 14.2 1.2 186 chr2R 14998491 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998677 intergenic not near genes chr2R_18_14995001 chr2R_14995001 RAL-307_100b 1420 chr2R 15004692 15004753 chr2R 15005052 15005107 jockey 37 353 16.5 10.0 13.2 2.6 415 chr2R 15004692 intergenic not near genes chr2R 15004900 intergenic not near genes chr2R 15005107 intergenic not near genes chr2R_37_15000001 chr2R_15000001 RAL-307_100b 1421 chr2R 15015435 15015489 chr2R 15022882 15022938 mdg1 28 7447 5.0 9.0 7.0 3.5 7503 chr2R 15015435 intron hbs + chr2R 15019186 intron hbs + chr2R 15022938 intron hbs + chr2R_28_15015001 chr2R_15015001 RAL-307_100b 1422 chr2R 15065591 15065606 chr2R 15065695 15065709 6 102 32.0 13.5 22.8 0.3 118 chr2R 15065591 intergenic not near genes chr2R 15065650 intergenic not near genes chr2R 15065709 intergenic not near genes chr2R_6_15065001 chr2R_15065001 RAL-307_100b 1423 chr2R 15065607 15065650 chr2R 15065693 15065743 39 93 14.5 13.0 13.8 2.6 136 chr2R 15065607 intergenic not near genes chr2R 15065675 intergenic not near genes chr2R 15065743 intergenic not near genes chr2R_39_15065001 chr2R_15065001 RAL-307_100b 1424 chr2R 15119299 15119349 chr2R 15127799 15127828 Tirant 30 8502 13.5 7.5 10.5 2.6 8529 chr2R 15119299 intron chn + chr2R 15123564 intron chn + chr2R 15127828 intron chn + chr2R_30_15120001 chr2R_15120001 RAL-307_100b 1425 chr2R 15137942 15138000 chr2R 15138047 15138085 54 101 13.5 6.0 9.8 5.0 143 chr2R 15137942 intron chn + chr2R 15138014 intron chn + chr2R 15138085 intron chn + chr2R_54_15135001 chr2R_15135001 RAL-307_100b 1426 chr2R 15157069 15157108 chr2R 15157184 15157197 14 113 0.0 7.5 3.8 2.9 128 chr2R 15157069 intron igl + chr2R 15157133 intron igl + chr2R 15157197 intron igl + chr2R_14_15155001 chr2R_15155001 RAL-307_100b 1427 chr2R 15296134 15296173 chr2R 15296242 15296281 55 103 14.0 16.5 15.2 3.4 147 chr2R 15296134 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296281 intron Trpm - chr2R_55_15295001 chr2R_15295001 RAL-307_100b 1428 chr2R 15330185 15330238 chr2R 15330341 15330395 37 156 10.0 14.5 12.2 2.8 210 chr2R 15330185 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330395 3` UTR CR44371 - chr2R_37_15330001 chr2R_15330001 RAL-307_100b 1429 chr2R 15359357 15359416 chr2R 15359460 15359520 36 103 13.0 13.5 13.2 2.5 163 chr2R 15359357 intron unc-5 + chr2R 15359438 intron unc-5 + chr2R 15359520 intron unc-5 + chr2R_36_15355001 chr2R_15355001 RAL-307_100b 1430 chr2R 15390042 15390046 chr2R 15390144 15390148 4 102 25.0 15.5 20.2 0.2 106 chr2R 15390042 intergenic not near genes chr2R 15390095 intergenic not near genes chr2R 15390148 intergenic not near genes chr2R_4_15390001 chr2R_15390001 RAL-307_100b 1431 chr2R 15390047 15390062 chr2R 15390143 15390164 12 100 21.5 15.0 18.2 0.6 117 chr2R 15390047 intergenic not near genes chr2R 15390106 intergenic not near genes chr2R 15390164 intergenic not near genes chr2R_12_15390001 chr2R_15390001 RAL-307_100b 1432 chr2R 15390064 15390073 chr2R 15390166 15390175 5 102 16.0 23.0 19.5 0.2 111 chr2R 15390064 intergenic not near genes chr2R 15390120 intergenic not near genes chr2R 15390175 intergenic not near genes chr2R_5_15390001 chr2R_15390001 RAL-307_100b 1433 chr2R 15390074 15390090 chr2R 15390159 15390192 14 100 9.5 20.5 15.0 0.9 118 chr2R 15390074 intergenic not near genes chr2R 15390133 intergenic not near genes chr2R 15390192 intergenic not near genes chr2R_14_15390001 chr2R_15390001 RAL-307_100b 1434 chr2R 15408439 15408496 chr2R 15408563 15408622 36 118 20.0 17.0 18.5 1.8 183 chr2R 15408439 intron CG43729 + chr2R 15408530 intron CG43729 + chr2R 15408622 intron CG43729 + chr2R_36_15405001 chr2R_15405001 RAL-307_100b 1435 chr2R 15472027 15472060 chr2R 15472136 15472169 11 109 0.0 14.0 7.0 1.4 142 chr2R 15472027 intergenic CG43729 +,CG8180 - chr2R 15472098 intergenic CG8180 -,CG43729 + chr2R 15472169 intergenic CG8180 -,CG43729 + chr2R_11_15470001 chr2R_15470001 RAL-307_100b 1436 chr2R 15498135 15498193 chr2R 15498242 15498301 21 107 8.5 0.0 4.2 4.0 166 chr2R 15498135 intergenic not near genes chr2R 15498218 intergenic not near genes chr2R 15498301 intergenic not near genes chr2R_21_15495001 chr2R_15495001 RAL-307_100b 1437 chr2R 15593287 15593303 chr2R 15593397 15593403 14 108 43.0 39.5 41.2 0.3 116 chr2R 15593287 intergenic not near genes chr2R 15593345 intergenic not near genes chr2R 15593403 intergenic not near genes chr2R_14_15590001 chr2R_15590001 RAL-307_100b 1438 chr2R 15638602 15638662 chr2R 15638718 15638776 35 112 8.0 11.5 9.8 3.2 174 chr2R 15638602 intron CG42524 + chr2R 15638689 intron CG42524 + chr2R 15638776 intron CG42524 + chr2R_35_15635001 chr2R_15635001 RAL-307_100b 1439 chr2R 15645766 15645817 chr2R 15645956 15646007 45 190 103.0 119.5 111.2 0.4 241 chr2R 15645766 intron CG42524 + chr2R 15645886 intron CG42524 + chr2R 15646007 intron CG42524 + chr2R_45_15645001 chr2R_15645001 RAL-307_100b 1440 chr2R 15656039 15656069 chr2R 15656155 15656180 10 115 1.0 21.5 11.2 0.8 141 chr2R 15656039 intron CG42524 + chr2R 15656110 intron CG42524 + chr2R 15656180 intron CG42524 + chr2R_10_15655001 chr2R_15655001 RAL-307_100b 1441 chr2R 15679081 15679130 chr2R 15679190 15679239 28 108 11.5 11.0 11.2 2.3 158 chr2R 15679081 intergenic CG8207 -,Vha14-1 - chr2R 15679160 intergenic CG8207 -,Vha14-1 - chr2R 15679239 intergenic Vha14-1 -,CG8207 - chr2R_28_15675001 chr2R_15675001 RAL-307_100b 1442 chr2R 15702934 15702962 chr2R 15703036 15703064 25 101 21.5 15.0 18.2 1.3 130 chr2R 15702934 intergenic not near genes chr2R 15702999 intergenic not near genes chr2R 15703064 intergenic not near genes chr2R_25_15700001 chr2R_15700001 RAL-307_100b 1443 chr2R 15702966 15702973 chr2R 15703033 15703075 7 96 16.5 16.0 16.2 0.4 109 chr2R 15702966 intergenic not near genes chr2R 15703020 intergenic not near genes chr2R 15703075 intergenic not near genes chr2R_7_15700001 chr2R_15700001 RAL-307_100b 1444 chr2R 15749685 15749742 chr2R 15749786 15749844 16 101 15.0 14.0 14.5 1.0 159 chr2R 15749685 intron CG30089 + chr2R 15749764 intron CG30089 + chr2R 15749844 intron CG30089 + chr2R_16_15745001 chr2R_15745001 RAL-307_100b 1445 chr2R 15818777 15818820 chr2R 15818887 15818930 21 109 6.5 9.5 8.0 2.3 153 chr2R 15818777 intron tun + chr2R 15818854 intron tun + chr2R 15818930 intron tun + chr2R_21_15815001 chr2R_15815001 RAL-307_100b 1446 chr2R 15869250 15869306 chr2R 15869357 15869408 16 104 12.0 0.0 6.0 2.3 158 chr2R 15869250 intergenic Rif1 -,sli - chr2R 15869329 intergenic sli -,Rif1 - chr2R 15869408 intergenic sli -,Rif1 - chr2R_16_15865001 chr2R_15865001 RAL-307_100b 1447 chr2R 15891793 15891836 chr2R 15891894 15891936 26 99 10.0 14.0 12.0 2.0 143 chr2R 15891793 intron sli - chr2R 15891864 intron sli - chr2R 15891936 intron sli - chr2R_26_15890001 chr2R_15890001 RAL-307_100b 1448 chr2R 15930359 15930403 chr2R 15930461 15930465 5 88 28.0 4.5 16.2 0.3 106 chr2R 15930359 intron bdg - chr2R 15930412 intron bdg - chr2R 15930465 intron bdg - chr2R_5_15930001 chr2R_15930001 RAL-307_100b 1449 chr2R 16092491 16092511 chr2R 16092563 16092564 5 63 15.0 0.0 7.5 0.6 73 chr2R 16092491 intron Dg - chr2R 16092528 intron Dg - chr2R 16092564 intron Dg - chr2R_5_16090001 chr2R_16090001 RAL-307_100b 1450 chr2R 16225176 16225235 chr2R 16225309 16225368 48 126 6.0 13.5 9.8 4.4 192 chr2R 16225176 5` UTR CG15706 - chr2R 16225272 5` UTR CG15706 - chr2R 16225368 intron CG15706 - chr2R_48_16225001 chr2R_16225001 RAL-307_100b 1451 chr2R 16245388 16245430 chr2R 16245507 16245549 35 116 13.5 11.5 12.5 2.6 161 chr2R 16245388 intron CngA - chr2R 16245468 intron CngA - chr2R 16245549 intron CngA - chr2R_35_16245001 chr2R_16245001 RAL-307_100b 1452 chr2R 16352827 16352869 chr2R 16352926 16352954 20 106 14.5 0.0 7.2 2.4 127 chr2R 16352827 intergenic not near genes chr2R 16352890 intergenic not near genes chr2R 16352954 intergenic not near genes chr2R_20_16350001 chr2R_16350001 RAL-307_100b 1453 chr2R 16380108 16380124 chr2R 16380217 16380247 13 119 35.5 8.5 22.0 0.6 139 chr2R 16380108 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380178 3` UTR CR45317 - chr2R 16380247 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_13_16380001 chr2R_16380001 RAL-307_100b 1454 chr2R 16380126 16380156 chr2R 16380216 16380232 21 115 18.0 7.5 12.8 1.5 106 chr2R 16380126 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380179 3` UTR CR45317 - chr2R 16380232 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_21_16380001 chr2R_16380001 RAL-307_100b 1455 chr2R 16460468 16460759 chr2R 16460571 16460866 29 104 18.5 11.5 15.0 1.8 398 chr2R 16460468 intergenic not near genes chr2R 16460667 intergenic not near genes chr2R 16460866 intergenic not near genes chr2R_29_16460001 chr2R_16460001 RAL-307_100b 1456 chr2R 16460766 16460767 chr2R 16460860 16460874 6 101 16.5 28.0 22.2 0.3 108 chr2R 16460766 intergenic not near genes chr2R 16460820 intergenic not near genes chr2R 16460874 intergenic not near genes chr2R_6_16460001 chr2R_16460001 RAL-307_100b 1457 chr2R 16539613 16539634 chr2R 16544844 16544865 copia 5 5229 15.0 0.0 7.5 0.6 5252 chr2R 16539613 intergenic not near genes chr2R 16542239 intergenic not near genes chr2R 16544865 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-307_100b 1458 chr2R 16544844 16544869 chr2R 16544944 16544979 27 109 0.0 0.0 0.0 27.0 135 chr2R 16544844 intergenic not near genes chr2R 16544912 intergenic not near genes chr2R 16544979 intergenic not near genes chr2R_27_16540001 chr2R_16540001 RAL-307_100b 1459 chr2R 16546977 16547033 chr2R 16547082 16547115 15 98 0.5 0.0 0.2 12.5 138 chr2R 16546977 intergenic not near genes chr2R 16547046 intergenic not near genes chr2R 16547115 intergenic not near genes chr2R_15_16545001 chr2R_16545001 RAL-307_100b 1460 chr2R 16552028 16552035 chr2R 16552142 16552149 7 113 28.0 13.5 20.8 0.3 121 chr2R 16552028 intergenic Syn2 + chr2R 16552088 intergenic Syn2 + chr2R 16552149 intergenic Syn2 + chr2R_7_16550001 chr2R_16550001 RAL-307_100b 1461 chr2R 16552036 16552081 chr2R 16552140 16552195 64 108 8.0 12.5 10.2 5.7 159 chr2R 16552036 intergenic Syn2 + chr2R 16552116 intergenic Syn2 + chr2R 16552195 intergenic Syn2 + chr2R_64_16550001 chr2R_16550001 RAL-307_100b 1462 chr2R 16586854 16586909 chr2R 16586951 16587012 49 101 14.5 13.5 14.0 3.3 158 chr2R 16586854 intergenic RpLP2 +,CG8311 - chr2R 16586933 intergenic CG8311 -,RpLP2 + chr2R 16587012 intergenic CG8311 -,RpLP2 + chr2R_49_16585001 chr2R_16585001 RAL-307_100b 1463 chr2R 16617059 16617080 chr2R 16617158 16617162 18 100 19.5 23.0 21.2 0.8 103 chr2R 16617059 intron CG5065 + chr2R 16617110 intron CG5065 + chr2R 16617162 intron CG5065 + chr2R_18_16615001 chr2R_16615001 RAL-307_100b 1464 chr2R 16617081 16617090 chr2R 16617145 16617195 5 88 15.0 16.0 15.5 0.3 114 chr2R 16617081 intron CG5065 + chr2R 16617138 intron CG5065 + chr2R 16617195 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-307_100b 1465 chr2R 16619949 16619995 chr2R 16620055 16620066 28 100 13.5 0.0 6.8 3.6 117 chr2R 16619949 intron CG5065 + chr2R 16620008 intron CG5065 + chr2R 16620066 intron CG5065 + chr2R_28_16620001 chr2R_16620001 RAL-307_100b 1466 chr2R 16838594 16838711 chr2R 16838695 16838832 44 113 0.0 0.0 0.0 44.0 238 chr2R 16838594 5` UTR CR43650 + chr2R 16838713 5` UTR CR43650 + chr2R 16838832 5` UTR CR43650 + chr2R_44_16835001 chr2R_16835001 RAL-307_100b 1467 chr2R 16910205 16910246 chr2R 16910329 16910370 44 122 14.0 22.0 18.0 2.3 165 chr2R 16910205 intergenic not near genes chr2R 16910288 intergenic not near genes chr2R 16910370 intergenic not near genes chr2R_44_16910001 chr2R_16910001 RAL-307_100b 1468 chr2R 16930603 16930626 chr2R 16930706 16930729 17 102 0.0 9.5 4.8 2.9 126 chr2R 16930603 intron Pkc53E + chr2R 16930666 intron Pkc53E + chr2R 16930729 intron Pkc53E + chr2R_17_16930001 chr2R_16930001 RAL-307_100b 1469 chr2R 16993069 16993130 chr2R 16993173 16993224 27 102 7.5 2.0 4.8 4.7 155 chr2R 16993069 intron Cbp53E + chr2R 16993146 intron Cbp53E + chr2R 16993224 intron Cbp53E + chr2R_27_16990001 chr2R_16990001 RAL-307_100b 1470 chr2R 17048598 17048600 chr2R 17048702 17048704 5 104 37.5 11.5 24.5 0.2 106 chr2R 17048598 3` UTR CG9642 + chr2R 17048651 3` UTR CG9642 + chr2R 17048704 3` UTR CG9642 + chr2R_5_17045001 chr2R_17045001 RAL-307_100b 1471 chr2R 17048601 17048653 chr2R 17048700 17048757 40 104 11.5 11.0 11.2 3.3 156 chr2R 17048601 3` UTR CG9642 + chr2R 17048679 3` UTR CG9642 + chr2R 17048757 3` UTR CG9642 + chr2R_40_17045001 chr2R_17045001 RAL-307_100b 1472 chr2R 17066461 17066469 chr2R 17066566 17066573 10 105 37.5 13.5 25.5 0.4 112 chr2R 17066461 3` UTR,3` UTR CG6967 +,CG30460 - chr2R 17066517 3` UTR,3` UTR CG6967 +,CG30460 - chr2R 17066573 3` UTR CG30460 - chr2R_10_17065001 chr2R_17065001 RAL-307_100b 1473 chr2R 17066470 17066512 chr2R 17066563 17066616 37 102 14.0 12.0 13.0 2.6 146 chr2R 17066470 3` UTR,3` UTR CG6967 +,CG30460 - chr2R 17066543 3` UTR,3` UTR CG6967 +,CG30460 - chr2R 17066616 3` UTR CG30460 - chr2R_37_17065001 chr2R_17065001 RAL-307_100b 1474 chr2R 17079027 17079087 chr2R 17079134 17079193 22 106 10.0 8.5 9.2 2.2 166 chr2R 17079027 intron CG30460 - chr2R 17079110 intron CG30460 - chr2R 17079193 intron CG30460 - chr2R_22_17075001 chr2R_17075001 RAL-307_100b 1475 chr2R 17098634 17098657 chr2R 17098743 17098771 18 112 33.0 22.0 27.5 0.6 137 chr2R 17098634 intergenic GstS1 - chr2R 17098702 intergenic GstS1 - chr2R 17098771 intergenic GstS1 - chr2R_18_17095001 chr2R_17095001 RAL-307_100b 1476 chr2R 17139387 17139390 chr2R 17139552 17139555 4 165 22.0 17.5 19.8 0.2 168 chr2R 17139387 3` UTR CG11395 + chr2R 17139471 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139555 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_4_17135001 chr2R_17135001 RAL-307_100b 1477 chr2R 17139393 17139406 chr2R 17139546 17139571 9 163 14.0 14.0 14.0 0.6 178 chr2R 17139393 3` UTR CG11395 + chr2R 17139482 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139571 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_9_17135001 chr2R_17135001 RAL-307_100b 1478 chr2R 17147221 17147268 chr2R 17152277 17152292 jockey 37 5053 19.5 14.0 16.8 2.1 5071 chr2R 17147221 intergenic not near genes chr2R 17149756 intergenic not near genes chr2R 17152292 intergenic not near genes chr2R_37_17145001 chr2R_17145001 RAL-307_100b 1479 chr2R 17161329 17161360 chr2R 17161561 17161577 12 228 14.0 0.0 7.0 1.5 248 chr2R 17161329 intergenic CG30457 - chr2R 17161453 intergenic not near genes chr2R 17161577 intergenic not near genes chr2R_12_17160001 chr2R_17160001 RAL-307_100b 1480 chr2R 17176352 17176367 chr2R 17182567 17182582 diver 10 6215 3.0 26.5 14.8 0.6 6230 chr2R 17176352 intergenic not near genes chr2R 17179467 intergenic not near genes chr2R 17182582 intergenic not near genes chr2R_10_17175001 chr2R_17175001 RAL-307_100b 1481 chr2R 17176371 17176382 chr2R 17182557 17182597 diver 8 6209 2.5 21.5 12.0 0.6 6226 chr2R 17176371 intergenic not near genes chr2R 17179484 intergenic not near genes chr2R 17182597 intergenic not near genes chr2R_8_17175001 chr2R_17175001 RAL-307_100b 1482 chr2R 17227060 17227118 chr2R 17227165 17227218 35 102 16.0 9.5 12.8 2.5 158 chr2R 17227060 intron mbl + chr2R 17227139 intron mbl + chr2R 17227218 intron mbl + chr2R_35_17225001 chr2R_17225001 RAL-307_100b 1483 chr2R 17236488 17236540 chr2R 17241710 17241743 copia 47 5225 16.0 16.0 16.0 2.8 5255 chr2R 17236488 intron mbl + chr2R 17239116 intron mbl + chr2R 17241743 intron mbl + chr2R_47_17235001 chr2R_17235001 RAL-307_100b 1484 chr2R 17259107 17259159 chr2R 17259250 17259300 27 140 8.0 6.0 7.0 3.4 193 chr2R 17259107 intron mbl + chr2R 17259204 intron mbl + chr2R 17259300 intron mbl + chr2R_27_17255001 chr2R_17255001 RAL-307_100b 1485 chr2R 17263284 17263327 chr2R 17263390 17263432 23 105 9.5 12.0 10.8 1.9 148 chr2R 17263284 intron mbl + chr2R 17263358 intron mbl + chr2R 17263432 intron mbl + chr2R_23_17260001 chr2R_17260001 RAL-307_100b 1486 chr2R 17339597 17339601 chr2R 17339669 17339719 5 104 1.0 17.5 9.2 0.5 122 chr2R 17339597 intron mbl + chr2R 17339658 intron mbl + chr2R 17339719 intron mbl + chr2R_5_17335001 chr2R_17335001 RAL-307_100b 1487 chr2R 17389244 17389262 chr2R 17389360 17389378 19 115 38.0 16.5 27.2 0.7 134 chr2R 17389244 intergenic CR44344 - chr2R 17389311 intergenic CR44344 - chr2R 17389378 intergenic CR44344 - chr2R_19_17385001 chr2R_17385001 RAL-307_100b 1488 chr2R 17389263 17389304 chr2R 17389359 17389400 39 109 13.5 16.0 14.8 2.5 137 chr2R 17389263 intergenic CR44344 - chr2R 17389332 intergenic CR44344 - chr2R 17389400 intergenic CR44344 - chr2R_39_17385001 chr2R_17385001 RAL-307_100b 1489 chr2R 17397801 17397835 chr2R 17397917 17397951 21 115 8.5 15.0 11.8 1.6 150 chr2R 17397801 intron Sip1 + chr2R 17397876 intron Sip1 + chr2R 17397951 intron Sip1 + chr2R_21_17395001 chr2R_17395001 RAL-307_100b 1490 chr2R 17458980 17459035 chr2R 17459090 17459145 50 107 17.5 15.5 16.5 2.9 165 chr2R 17458980 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459145 intron CG14478 + chr2R_50_17455001 chr2R_17455001 RAL-307_100b 1491 chr2R 17470326 17470353 chr2R 17470435 17470459 19 106 5.0 5.5 5.2 3.1 133 chr2R 17470326 intron qkr54B + chr2R 17470392 intron qkr54B + chr2R 17470459 intron qkr54B + chr2R_19_17470001 chr2R_17470001 RAL-307_100b 1492 chr2R 17485892 17485942 chr2R 17490687 17490735 F-element 31 4792 12.0 11.0 11.5 2.5 4843 chr2R 17485892 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488314 intron NT5E-2 + chr2R 17490735 intron NT5E-2 + chr2R_31_17485001 chr2R_17485001 RAL-307_100b 1493 chr2R 17500634 17500689 chr2R 17500735 17500790 18 100 13.0 12.5 12.8 1.3 156 chr2R 17500634 intergenic not near genes chr2R 17500712 intergenic not near genes chr2R 17500790 intergenic not near genes chr2R_18_17500001 chr2R_17500001 RAL-307_100b 1494 chr2R 17532231 17532245 chr2R 17532333 17532343 16 101 45.0 35.0 40.0 0.4 112 chr2R 17532231 intron Patronin - chr2R 17532287 intron Patronin - chr2R 17532343 intron Patronin - chr2R_16_17530001 chr2R_17530001 RAL-307_100b 1495 chr2R 17643969 17643980 chr2R 17644069 17644081 10 101 14.5 12.5 13.5 0.7 112 chr2R 17643969 intergenic not near genes chr2R 17644025 intergenic not near genes chr2R 17644081 intergenic not near genes chr2R_10_17640001 chr2R_17640001 RAL-307_100b 1496 chr2R 17643982 17643985 chr2R 17644068 17644086 6 98 14.0 12.0 13.0 0.4 104 chr2R 17643982 intergenic not near genes chr2R 17644034 intergenic not near genes chr2R 17644086 intergenic not near genes chr2R_6_17640001 chr2R_17640001 RAL-307_100b 1497 chr2R 17709955 17710011 chr2R 17710071 17710126 17 112 9.5 6.5 8.0 1.9 171 chr2R 17709955 intron CG6424 - chr2R 17710040 intron CG6424 - chr2R 17710126 intron CG6424 - chr2R_17_17710001 chr2R_17710001 RAL-307_100b 1498 chr2R 17760641 17760694 chr2R 17760793 17760846 42 150 10.0 11.0 10.5 3.7 205 chr2R 17760641 intergenic HLH54F +,CG5009 + chr2R 17760744 intergenic CG5009 +,HLH54F + chr2R 17760846 intergenic CG5009 +,HLH54F + chr2R_42_17760001 chr2R_17760001 RAL-307_100b 1499 chr2R 17782342 17782391 chr2R 17783570 17783619 pogo 26 1227 12.5 14.5 13.5 1.8 1277 chr2R 17782342 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783619 intergenic mir-31a - chr2R_26_17780001 chr2R_17780001 RAL-307_100b 1500 chr2R 17783999 17784056 chr2R 17784265 17784322 pogo 53 262 17.5 19.0 18.2 2.8 323 chr2R 17783999 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784322 intergenic mir-31a - chr2R_53_17780001 chr2R_17780001 RAL-307_100b 1501 chr2R 17832085 17832093 chr2R 17832186 17832194 9 101 3.5 12.5 8.0 1.0 109 chr2R 17832085 intron grh + chr2R 17832140 intron grh + chr2R 17832194 intron grh + chr2R_9_17830001 chr2R_17830001 RAL-307_100b 1502 chr2R 17832094 17832141 chr2R 17832185 17832241 35 98 6.5 13.0 9.8 3.2 147 chr2R 17832094 intron grh + chr2R 17832168 intron grh + chr2R 17832241 intron grh + chr2R_35_17830001 chr2R_17830001 RAL-307_100b 1503 chr2R 17918148 17918196 chr2R 17918238 17918271 32 85 14.5 6.5 10.5 2.8 123 chr2R 17918148 intron Elk + chr2R 17918210 intron Elk + chr2R 17918271 intron Elk + chr2R_32_17915001 chr2R_17915001 RAL-307_100b 1504 chr2R 17960125 17960172 chr2R 17960235 17960281 15 110 9.5 17.0 13.2 1.1 156 chr2R 17960125 intergenic not near genes chr2R 17960203 intergenic not near genes chr2R 17960281 intergenic not near genes chr2R_15_17960001 chr2R_17960001 RAL-307_100b 1505 chr2R 17966126 17966176 chr2R 17966232 17966282 35 99 12.5 13.0 12.8 2.5 156 chr2R 17966126 intergenic not near genes chr2R 17966204 intergenic not near genes chr2R 17966282 intergenic not near genes chr2R_35_17965001 chr2R_17965001 RAL-307_100b 1506 chr2R 17971021 17971043 chr2R 17971202 17971224 18 177 8.5 16.5 12.5 1.3 203 chr2R 17971021 intergenic not near genes chr2R 17971122 intergenic not near genes chr2R 17971224 intergenic not near genes chr2R_18_17970001 chr2R_17970001 RAL-307_100b 1507 chr2R 17982898 17982953 chr2R 17983008 17983043 51 107 15.0 14.5 14.8 3.2 145 chr2R 17982898 intron dpr13 - chr2R 17982970 intron dpr13 - chr2R 17983043 intron dpr13 - chr2R_51_17980001 chr2R_17980001 RAL-307_100b 1508 chr2R 17986324 17986371 chr2R 17986467 17986514 24 142 1.5 9.0 5.2 3.9 190 chr2R 17986324 intron dpr13 - chr2R 17986419 intron dpr13 - chr2R 17986514 intron dpr13 - chr2R_24_17985001 chr2R_17985001 RAL-307_100b 1509 chr2R 17991334 17991338 chr2R 17991441 17991445 4 107 45.5 11.5 28.5 0.1 111 chr2R 17991334 intron dpr13 - chr2R 17991390 intron dpr13 - chr2R 17991445 intron dpr13 - chr2R_4_17990001 chr2R_17990001 RAL-307_100b 1510 chr2R 17991339 17991392 chr2R 17991440 17991455 57 103 11.5 11.0 11.2 4.7 116 chr2R 17991339 intron dpr13 - chr2R 17991397 intron dpr13 - chr2R 17991455 intron dpr13 - chr2R_57_17990001 chr2R_17990001 RAL-307_100b 1511 chr2R 18004563 18004623 chr2R 18005112 18005173 38 545 10.0 10.0 10.0 3.5 610 chr2R 18004563 intron dpr13 - chr2R 18004868 intron dpr13 - chr2R 18005173 intron dpr13 - chr2R_38_18000001 chr2R_18000001 RAL-307_100b 1512 chr2R 18045271 18045327 chr2R 18045384 18045429 57 110 10.5 5.5 8.0 6.3 158 chr2R 18045271 intergenic CG5770 - chr2R 18045350 intergenic CG5770 - chr2R 18045429 intergenic CG5770 - chr2R_57_18045001 chr2R_18045001 RAL-307_100b 1513 chr2R 18045647 18045700 chr2R 18046024 18046077 jockey 41 375 8.5 9.5 9.0 4.1 430 chr2R 18045647 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046077 intergenic CG5767 - chr2R_41_18045001 chr2R_18045001 RAL-307_100b 1514 chr2R 18074579 18074621 chr2R 18074680 18074722 26 99 10.0 11.5 10.8 2.2 143 chr2R 18074579 intron CG34386 + chr2R 18074650 intron CG34386 + chr2R 18074722 intron CG34386 + chr2R_26_18070001 chr2R_18070001 RAL-307_100b 1515 chr2R 18075946 18075954 chr2R 18076065 18076073 5 119 29.5 20.0 24.8 0.2 127 chr2R 18075946 intron CG34386 + chr2R 18076010 intron CG34386 + chr2R 18076073 intron CG34386 + chr2R_5_18075001 chr2R_18075001 RAL-307_100b 1516 chr2R 18075955 18076002 chr2R 18076064 18076121 44 115 12.5 19.0 15.8 2.6 166 chr2R 18075955 intron CG34386 + chr2R 18076038 intron CG34386 + chr2R 18076121 intron CG34386 + chr2R_44_18075001 chr2R_18075001 RAL-307_100b 1517 chr2R 18111670 18111689 chr2R 18115557 18115582 F-element 17 3892 30.5 17.5 24.0 0.7 3912 chr2R 18111670 intergenic not near genes chr2R 18113626 intergenic not near genes chr2R 18115582 intergenic not near genes chr2R_17_18110001 chr2R_18110001 RAL-307_100b 1518 chr2R 18111690 18111714 chr2R 18115553 18115607 F-element 20 3887 20.0 16.5 18.2 1.0 3917 chr2R 18111690 intergenic not near genes chr2R 18113648 intergenic not near genes chr2R 18115607 intergenic not near genes chr2R_20_18110001 chr2R_18110001 RAL-307_100b 1519 chr2R 18144820 18144878 chr2R 18144967 18145022 13 134 95.0 79.5 87.2 0.1 202 chr2R 18144820 exon pAbp + chr2R 18144921 intron pAbp + chr2R 18145022 exon pAbp + chr2R_13_18140001 chr2R_18140001 RAL-307_100b 1520 chr2R 18195181 18195224 chr2R 18195293 18195337 8 103 5.5 13.5 9.5 0.8 156 chr2R 18195181 intergenic not near genes chr2R 18195259 intergenic not near genes chr2R 18195337 intergenic not near genes chr2R_8_18195001 chr2R_18195001 RAL-307_100b 1521 chr2R 18204117 18204158 chr2R 18204227 18204263 31 108 13.5 0.0 6.8 4.0 146 chr2R 18204117 intergenic not near genes chr2R 18204190 intergenic not near genes chr2R 18204263 intergenic not near genes chr2R_31_18200001 chr2R_18200001 RAL-307_100b 1522 chr2R 18289401 18289462 chr2R 18289528 18289573 49 121 10.5 15.5 13.0 3.5 172 chr2R 18289401 intron,intron sbb -,CG14502 + chr2R 18289487 intron,intron sbb -,CG14502 + chr2R 18289573 exon,intron sbb -,CG14502 + chr2R_49_18285001 chr2R_18285001 RAL-307_100b 1523 chr2R 18308260 18308265 chr2R 18308391 18308396 7 131 39.0 15.5 27.2 0.2 136 chr2R 18308260 intron sbb - chr2R 18308328 intron sbb - chr2R 18308396 intron sbb - chr2R_7_18305001 chr2R_18305001 RAL-307_100b 1524 chr2R 18308267 18308319 chr2R 18308389 18308450 54 128 15.0 14.0 14.5 3.5 183 chr2R 18308267 intron sbb - chr2R 18308358 intron sbb - chr2R 18308450 intron sbb - chr2R_54_18305001 chr2R_18305001 RAL-307_100b 1525 chr2R 18358371 18358386 chr2R 18372608 18372623 roo 14 14235 30.0 0.5 15.2 0.9 14252 chr2R 18358371 intergenic not near genes chr2R 18365497 intergenic not near genes chr2R 18372623 intergenic not near genes chr2R_14_18365001 chr2R_18365001 RAL-307_100b 1526 chr2R 18358388 18358397 chr2R 18372599 18372634 roo 12 14235 25.0 0.5 12.8 0.9 14246 chr2R 18358388 intergenic not near genes chr2R 18365511 intergenic not near genes chr2R 18372634 intergenic not near genes chr2R_12_18365001 chr2R_18365001 RAL-307_100b 1527 chr2R 18390844 18390903 chr2R 18390956 18390975 19 108 8.5 10.0 9.2 1.9 131 chr2R 18390844 intergenic CG15068 - chr2R 18390910 intergenic CG15068 - chr2R 18390975 intergenic CG15068 - chr2R_19_18390001 chr2R_18390001 RAL-307_100b 1528 chr2R 18402738 18402746 chr2R 18402964 18402974 9 227 32.0 0.0 16.0 0.5 236 chr2R 18402738 intergenic not near genes chr2R 18402856 intergenic GstE4 + chr2R 18402974 intergenic GstE4 + chr2R_9_18400001 chr2R_18400001 RAL-307_100b 1529 chr2R 18402748 18402786 chr2R 18402963 18403004 14 220 10.0 0.0 5.0 2.3 256 chr2R 18402748 intergenic GstE4 + chr2R 18402876 intergenic GstE4 + chr2R 18403004 intergenic GstE4 + chr2R_14_18400001 chr2R_18400001 RAL-307_100b 1530 chr2R 18403308 18403315 chr2R 18404471 18404478 10 1163 46.5 21.0 33.8 0.3 1170 chr2R 18403308 exon GstE4 + chr2R 18403893 exon GstE4 + chr2R 18404478 intergenic GstE5 +,GstE4 + chr2R_10_18400001 chr2R_18400001 RAL-307_100b 1531 chr2R 18403316 18403319 chr2R 18404469 18404482 4 1160 44.0 20.0 32.0 0.1 1166 chr2R 18403316 exon GstE4 + chr2R 18403899 exon GstE4 + chr2R 18404482 intergenic GstE5 +,GstE4 + chr2R_4_18400001 chr2R_18400001 RAL-307_100b 1532 chr2R 18403320 18403363 chr2R 18404468 18404489 50 1160 17.0 19.5 18.2 2.6 1169 chr2R 18403320 exon GstE4 + chr2R 18403904 exon GstE4 + chr2R 18404489 intergenic GstE5 +,GstE4 + chr2R_50_18400001 chr2R_18400001 RAL-307_100b 1533 chr2R 18405730 18405784 chr2R 18405836 18405885 24 104 11.5 14.5 13.0 1.7 155 chr2R 18405730 intergenic GstE6 +,GstE5 + chr2R 18405808 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_24_18405001 chr2R_18405001 RAL-307_100b 1534 chr2R 18408262 18408269 chr2R 18408408 18408415 7 146 42.5 20.5 31.5 0.2 153 chr2R 18408262 exon GstE8 + chr2R 18408338 exon GstE8 + chr2R 18408415 exon GstE8 + chr2R_7_18405001 chr2R_18405001 RAL-307_100b 1535 chr2R 18408270 18408315 chr2R 18408401 18408460 50 141 16.0 17.0 16.5 2.9 190 chr2R 18408270 exon GstE8 + chr2R 18408365 exon GstE8 + chr2R 18408460 exon GstE8 + chr2R_50_18405001 chr2R_18405001 RAL-307_100b 1536 chr2R 18435711 18435720 chr2R 18435821 18435830 5 110 38.0 6.0 22.0 0.2 119 chr2R 18435711 intron CG30118 - chr2R 18435770 intron CG30118 - chr2R 18435830 intron CG30118 - chr2R_5_18435001 chr2R_18435001 RAL-307_100b 1537 chr2R 18435721 18435768 chr2R 18435820 18435878 60 103 16.5 6.0 11.2 4.9 157 chr2R 18435721 intron CG30118 - chr2R 18435800 intron CG30118 - chr2R 18435878 intron CG30118 - chr2R_60_18435001 chr2R_18435001 RAL-307_100b 1538 chr2R 18439577 18439633 chr2R 18439712 18439753 55 126 17.0 20.0 18.5 2.8 176 chr2R 18439577 intron CG30118 - chr2R 18439665 intron CG30118 - chr2R 18439753 exon CG30118 - chr2R_55_18435001 chr2R_18435001 RAL-307_100b 1539 chr2R 18483001 18483057 chr2R 18483265 18483300 48 256 16.0 15.0 15.5 2.9 299 chr2R 18483001 intron CG30116 - chr2R 18483150 intron CG30116 - chr2R 18483300 intron CG30116 - chr2R_48_18480001 chr2R_18480001 RAL-307_100b 1540 chr2R 18487814 18487818 chr2R 18495290 18495294 blood 4 7476 14.0 13.5 13.8 0.3 7480 chr2R 18487814 intron CG30116 - chr2R 18491554 intron CG30116 - chr2R 18495294 intron CG30116 - chr2R_4_18490001 chr2R_18490001 RAL-307_100b 1541 chr2R 18487820 18487854 chr2R 18495289 18495349 blood 16 7487 0.0 13.0 6.5 2.1 7529 chr2R 18487820 intron CG30116 - chr2R 18491584 intron CG30116 - chr2R 18495349 intron CG30116 - chr2R_16_18490001 chr2R_18490001 RAL-307_100b 1542 chr2R 18513285 18513344 chr2R 18513392 18513451 44 105 1.5 11.5 6.5 5.9 166 chr2R 18513285 intergenic not near genes chr2R 18513368 intergenic not near genes chr2R 18513451 intergenic not near genes chr2R_44_18510001 chr2R_18510001 RAL-307_100b 1543 chr2R 18526569 18526575 chr2R 18526676 18526682 4 106 37.0 14.5 25.8 0.1 113 chr2R 18526569 intergenic CG43066 + chr2R 18526626 intergenic CG43066 + chr2R 18526682 intergenic CG43066 + chr2R_4_18525001 chr2R_18525001 RAL-307_100b 1544 chr2R 18526576 18526624 chr2R 18526673 18526725 43 104 16.5 11.5 14.0 2.9 149 chr2R 18526576 intergenic CG43066 + chr2R 18526650 intergenic CG43066 + chr2R 18526725 intergenic CG43066 + chr2R_43_18525001 chr2R_18525001 RAL-307_100b 1545 chr2R 18575770 18575830 chr2R 18581983 18582043 3S18 54 6204 11.5 9.5 10.5 4.7 6273 chr2R 18575770 intron GEFmeso - chr2R 18578906 intron GEFmeso - chr2R 18582043 intron GEFmeso - chr2R_54_18575001 chr2R_18575001 RAL-307_100b 1546 chr2R 18585782 18585794 chr2R 18585885 18585890 10 100 38.5 14.0 26.2 0.4 108 chr2R 18585782 intron GEFmeso - chr2R 18585836 intron GEFmeso - chr2R 18585890 intron GEFmeso - chr2R_10_18585001 chr2R_18585001 RAL-307_100b 1547 chr2R 18585795 18585819 chr2R 18585883 18585922 29 100 27.0 13.0 20.0 1.4 127 chr2R 18585795 intron GEFmeso - chr2R 18585858 intron GEFmeso - chr2R 18585922 intron GEFmeso - chr2R_29_18585001 chr2R_18585001 RAL-307_100b 1548 chr2R 18590845 18590847 chr2R 18600022 18600024 roo 4 9177 43.5 20.5 32.0 0.1 9179 chr2R 18590845 intron GEFmeso - chr2R 18595434 intron GEFmeso - chr2R 18600024 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-307_100b 1549 chr2R 18590848 18590900 chr2R 18600019 18600074 roo 58 9173 15.0 18.0 16.5 3.3 9226 chr2R 18590848 intron GEFmeso - chr2R 18595461 intron GEFmeso - chr2R 18600074 intron GEFmeso - chr2R_58_18595001 chr2R_18595001 RAL-307_100b 1550 chr2R 18601154 18601206 chr2R 18601446 18601483 43 288 20.0 2.5 11.2 3.5 329 chr2R 18601154 intron GEFmeso - chr2R 18601318 intron GEFmeso - chr2R 18601483 intron GEFmeso - chr2R_43_18600001 chr2R_18600001 RAL-307_100b 1551 chr2R 18605106 18605159 chr2R 18605223 18605270 40 116 15.5 12.0 13.8 2.7 164 chr2R 18605106 intron GEFmeso - chr2R 18605188 intron GEFmeso - chr2R 18605270 intron GEFmeso - chr2R_40_18605001 chr2R_18605001 RAL-307_100b 1552 chr2R 18646386 18646435 chr2R 18646556 18646600 45 167 15.0 16.5 15.8 2.7 214 chr2R 18646386 intron SP2637 - chr2R 18646493 intron SP2637 - chr2R 18646600 intron SP2637 - chr2R_45_18645001 chr2R_18645001 RAL-307_100b 1553 chr2R 18652333 18652357 chr2R 18652430 18652442 24 103 0.0 10.0 5.0 4.0 109 chr2R 18652333 intron SP2637 - chr2R 18652388 intron SP2637 - chr2R 18652442 intron SP2637 - chr2R_24_18650001 chr2R_18650001 RAL-307_100b 1554 chr2R 18666056 18666075 chr2R 18666169 18666188 15 113 12.5 9.0 10.8 1.3 132 chr2R 18666056 intergenic CG33136 - chr2R 18666122 intergenic CG33136 - chr2R 18666188 intergenic CG33136 - chr2R_15_18665001 chr2R_18665001 RAL-307_100b 1555 chr2R 18692877 18692911 chr2R 18692987 18693005 30 109 21.0 5.0 13.0 2.1 128 chr2R 18692877 intron Sik3 + chr2R 18692941 intron Sik3 + chr2R 18693005 intron Sik3 + chr2R_30_18690001 chr2R_18690001 RAL-307_100b 1556 chr2R 18713216 18713226 chr2R 18713318 18713328 10 102 42.0 13.0 27.5 0.4 112 chr2R 18713216 intergenic not near genes chr2R 18713272 intergenic not near genes chr2R 18713328 intergenic not near genes chr2R_10_18710001 chr2R_18710001 RAL-307_100b 1557 chr2R 18713227 18713271 chr2R 18713314 18713373 50 98 16.0 9.5 12.8 3.6 146 chr2R 18713227 intergenic not near genes chr2R 18713300 intergenic not near genes chr2R 18713373 intergenic not near genes chr2R_50_18710001 chr2R_18710001 RAL-307_100b 1558 chr2R 18726863 18727074 chr2R 18726971 18727269 91 126 27.5 16.0 21.8 4.0 406 chr2R 18726863 intron Hs3st-A + chr2R 18727066 intron Hs3st-A + chr2R 18727269 intron Hs3st-A + chr2R_91_18725001 chr2R_18725001 RAL-307_100b 1559 chr2R 18727077 18727081 chr2R 18727257 18727279 6 195 25.0 18.0 21.5 0.3 202 chr2R 18727077 intron Hs3st-A + chr2R 18727178 intron Hs3st-A + chr2R 18727279 intron Hs3st-A + chr2R_6_18725001 chr2R_18725001 RAL-307_100b 1560 chr2R 18727082 18727099 chr2R 18727255 18727282 17 191 17.5 17.5 17.5 0.9 200 chr2R 18727082 intron Hs3st-A + chr2R 18727182 intron Hs3st-A + chr2R 18727282 intron Hs3st-A + chr2R_17_18725001 chr2R_18725001 RAL-307_100b 1561 chr2R 18727101 18727105 chr2R 18727249 18727303 5 184 15.5 14.0 14.8 0.3 202 chr2R 18727101 intron Hs3st-A + chr2R 18727202 intron Hs3st-A + chr2R 18727303 intron Hs3st-A + chr2R_5_18725001 chr2R_18725001 RAL-307_100b 1562 chr2R 18736763 18736780 chr2R 18736913 18736929 16 149 25.5 24.5 25.0 0.6 166 chr2R 18736763 intron Hs3st-A + chr2R 18736846 intron Hs3st-A + chr2R 18736929 intron Hs3st-A + chr2R_16_18735001 chr2R_18735001 RAL-307_100b 1563 chr2R 18738184 18738240 chr2R 18738285 18738336 40 99 3.5 14.0 8.8 4.1 152 chr2R 18738184 intron Hs3st-A + chr2R 18738260 intron Hs3st-A + chr2R 18738336 intron Hs3st-A + chr2R_40_18735001 chr2R_18735001 RAL-307_100b 1564 chr2R 18835745 18835789 chr2R 18835852 18835885 32 105 15.5 0.0 7.8 3.6 140 chr2R 18835745 intron CG15083 + chr2R 18835815 intron CG15083 + chr2R 18835885 intron CG15083 + chr2R_32_18835001 chr2R_18835001 RAL-307_100b 1565 chr2R 18862292 18862409 chr2R 18862404 18862519 13 117 0.0 0.0 0.0 13.0 227 chr2R 18862292 intergenic Jheh3 - chr2R 18862406 intergenic Jheh3 -,CG43069 + chr2R 18862519 intergenic CG43069 +,Jheh3 - chr2R_13_18860001 chr2R_18860001 RAL-307_100b 1566 chr2R 18953138 18953190 chr2R 18953250 18953302 44 111 14.0 11.0 12.5 3.3 164 chr2R 18953138 intron sano + chr2R 18953220 intron sano + chr2R 18953302 intron sano + chr2R_44_18950001 chr2R_18950001 RAL-307_100b 1567 chr2R 19026037 19026061 chr2R 19026188 19026212 24 150 21.5 14.5 18.0 1.3 175 chr2R 19026037 intron 5-HT1B - chr2R 19026124 intron 5-HT1B - chr2R 19026212 intron 5-HT1B - chr2R_24_19025001 chr2R_19025001 RAL-307_100b 1568 chr2R 19065435 19065443 chr2R 19066387 19066395 6 952 26.5 16.5 21.5 0.3 960 chr2R 19065435 intergenic not near genes chr2R 19065915 intergenic not near genes chr2R 19066395 intergenic not near genes chr2R_6_19065001 chr2R_19065001 RAL-307_100b 1569 chr2R 19065445 19065460 chr2R 19066385 19066412 11 947 19.0 15.5 17.2 0.6 967 chr2R 19065445 intergenic not near genes chr2R 19065928 intergenic not near genes chr2R 19066412 intergenic not near genes chr2R_11_19065001 chr2R_19065001 RAL-307_100b 1570 chr2R 19065462 19065479 chr2R 19066384 19066431 15 948 7.0 14.5 10.8 1.3 969 chr2R 19065462 intergenic not near genes chr2R 19065946 intergenic not near genes chr2R 19066431 intergenic not near genes chr2R_15_19065001 chr2R_19065001 RAL-307_100b 1571 chr2R 19103385 19103429 chr2R 19103500 19103536 19 107 12.5 4.5 8.5 2.0 151 chr2R 19103385 intron 5-HT1A + chr2R 19103460 intron 5-HT1A + chr2R 19103536 intron 5-HT1A + chr2R_19_19100001 chr2R_19100001 RAL-307_100b 1572 chr2R 19300935 19300992 chr2R 19301043 19301100 62 106 6.5 10.5 8.5 6.5 165 chr2R 19300935 intron Tab2 + chr2R 19301018 intron Tab2 + chr2R 19301100 intron Tab2 + chr2R_62_19300001 chr2R_19300001 RAL-307_100b 1573 chr2R 19376110 19376142 chr2R 19376327 19376360 8 215 6.5 17.0 11.8 0.6 250 chr2R 19376110 intron CG10062 + chr2R 19376235 intron CG10062 + chr2R 19376360 intron CG10062 + chr2R_8_19375001 chr2R_19375001 RAL-307_100b 1574 chr2R 19383990 19384046 chr2R 19384123 19384179 50 132 10.5 19.5 15.0 3.1 189 chr2R 19383990 exon CG10073 + chr2R 19384084 exon CG10073 + chr2R 19384179 intron CG10073 + chr2R_50_19380001 chr2R_19380001 RAL-307_100b 1575 chr2R 19385098 19385104 chr2R 19385666 19385672 6 567 0.0 12.5 6.2 0.8 574 chr2R 19385098 intergenic CG10073 + chr2R 19385385 intergenic CG10073 + chr2R 19385672 intergenic CG10081 + chr2R_6_19385001 chr2R_19385001 RAL-307_100b 1576 chr2R 19385106 19385142 chr2R 19385660 19385699 27 564 0.0 9.0 4.5 4.9 593 chr2R 19385106 intergenic CG10073 + chr2R 19385402 intergenic CG10073 + chr2R 19385699 intergenic CG10081 + chr2R_27_19385001 chr2R_19385001 RAL-307_100b 1577 chr2R 19536441 19536501 chr2R 19536548 19536608 70 105 9.5 13.5 11.5 5.6 167 chr2R 19536441 intron sm - chr2R 19536524 intron sm - chr2R 19536608 intron sm - chr2R_70_19535001 chr2R_19535001 RAL-307_100b 1578 chr2R 19601245 19601249 chr2R 19601360 19601364 6 115 33.5 16.5 25.0 0.2 119 chr2R 19601245 intron sm - chr2R 19601304 intron sm - chr2R 19601364 intron sm - chr2R_6_19600001 chr2R_19600001 RAL-307_100b 1579 chr2R 19601252 19601301 chr2R 19601359 19601415 45 112 11.5 15.0 13.2 3.2 163 chr2R 19601252 intron sm - chr2R 19601334 intron sm - chr2R 19601415 intron sm - chr2R_45_19600001 chr2R_19600001 RAL-307_100b 1580 chr2R 19715831 19715844 chr2R 19723325 19723327 blood 14 7492 43.0 20.5 31.8 0.4 7496 chr2R 19715831 intergenic not near genes chr2R 19719579 intergenic not near genes chr2R 19723327 intergenic not near genes chr2R_14_19715001 chr2R_19715001 RAL-307_100b 1581 chr2R 19715845 19715857 chr2R 19723324 19723349 blood 13 7489 38.5 18.5 28.5 0.4 7504 chr2R 19715845 intergenic not near genes chr2R 19719597 intergenic not near genes chr2R 19723349 intergenic not near genes chr2R_13_19715001 chr2R_19715001 RAL-307_100b 1582 chr2R 19773988 19774040 chr2R 19774126 19774170 44 136 11.0 9.5 10.2 3.9 182 chr2R 19773988 intergenic not near genes chr2R 19774079 intergenic not near genes chr2R 19774170 intergenic not near genes chr2R_44_19770001 chr2R_19770001 RAL-307_100b 1583 chr2R 19776570 19776581 chr2R 19779918 19779929 jockey 7 3348 39.5 22.0 30.8 0.2 3359 chr2R 19776570 intergenic not near genes chr2R 19778250 intergenic not near genes chr2R 19779929 intergenic not near genes chr2R_7_19775001 chr2R_19775001 RAL-307_100b 1584 chr2R 19776582 19776623 chr2R 19779916 19779971 jockey 37 3345 17.0 21.0 19.0 1.9 3389 chr2R 19776582 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779971 intergenic not near genes chr2R_37_19775001 chr2R_19775001 RAL-307_100b 1585 chr2R 19896083 19896136 chr2R 19896201 19896221 56 113 17.5 13.0 15.2 3.5 138 chr2R 19896083 intergenic not near genes chr2R 19896152 intergenic not near genes chr2R 19896221 intergenic not near genes chr2R_56_19895001 chr2R_19895001 RAL-307_100b 1586 chr2R 19914823 19914839 chr2R 19922260 19922276 mdg1 16 7437 24.0 14.0 19.0 0.8 7453 chr2R 19914823 intergenic not near genes chr2R 19918550 intergenic not near genes chr2R 19922276 intergenic not near genes chr2R_16_19915001 chr2R_19915001 RAL-307_100b 1587 chr2R 19914843 19914872 chr2R 19922259 19922308 mdg1 22 7434 13.0 13.5 13.2 1.5 7465 chr2R 19914843 intergenic not near genes chr2R 19918576 intergenic not near genes chr2R 19922308 intergenic not near genes chr2R_22_19915001 chr2R_19915001 RAL-307_100b 1588 chr2R 19957407 19957426 chr2R 19962634 19962651 copia 16 5226 33.0 13.5 23.2 0.7 5244 chr2R 19957407 intergenic CG44623 + chr2R 19960029 intergenic not near genes chr2R 19962651 intergenic not near genes chr2R_16_19960001 chr2R_19960001 RAL-307_100b 1589 chr2R 19957434 19957464 chr2R 19962630 19962681 copia 24 5217 17.0 9.5 13.2 1.7 5247 chr2R 19957434 intergenic CG44623 + chr2R 19960058 intergenic not near genes chr2R 19962681 intergenic not near genes chr2R_24_19960001 chr2R_19960001 RAL-307_100b 1590 chr2R 20031882 20031885 chr2R 20032003 20032006 6 121 50.5 14.5 32.5 0.2 124 chr2R 20031882 intergenic not near genes chr2R 20031944 intergenic not near genes chr2R 20032006 intergenic not near genes chr2R_6_20030001 chr2R_20030001 RAL-307_100b 1591 chr2R 20031886 20031937 chr2R 20032002 20032058 44 117 18.0 14.0 16.0 2.6 172 chr2R 20031886 intergenic not near genes chr2R 20031972 intergenic not near genes chr2R 20032058 intergenic not near genes chr2R_44_20030001 chr2R_20030001 RAL-307_100b 1592 chr2R 20069212 20069230 chr2R 20071876 20071893 opus 4 2663 0.5 11.5 6.0 0.6 2681 chr2R 20069212 intergenic not near genes chr2R 20070552 intergenic not near genes chr2R 20071893 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-307_100b 1593 chr2R 20069233 20069255 chr2R 20071872 20071913 opus 25 2653 1.0 10.0 5.5 3.8 2680 chr2R 20069233 intergenic not near genes chr2R 20070573 intergenic not near genes chr2R 20071913 intergenic not near genes chr2R_25_20070001 chr2R_20070001 RAL-307_100b 1594 chr2R 20118847 20118903 chr2R 20118960 20119016 40 107 8.0 15.5 11.8 3.1 169 chr2R 20118847 intergenic not near genes chr2R 20118932 intergenic not near genes chr2R 20119016 intergenic not near genes chr2R_40_20115001 chr2R_20115001 RAL-307_100b 1595 chr2R 20125726 20125749 chr2R 20125820 20125850 20 100 11.5 24.0 17.8 1.1 124 chr2R 20125726 intergenic not near genes chr2R 20125788 intergenic not near genes chr2R 20125850 intergenic not near genes chr2R_20_20125001 chr2R_20125001 RAL-307_100b 1596 chr2R 20174623 20174676 chr2R 20174718 20174776 41 97 4.5 14.5 9.5 3.9 153 chr2R 20174623 intergenic not near genes chr2R 20174700 intergenic not near genes chr2R 20174776 intergenic not near genes chr2R_41_20170001 chr2R_20170001 RAL-307_100b 1597 chr2R 20178994 20179053 chr2R 20179097 20179156 60 99 19.5 16.5 18.0 3.2 162 chr2R 20178994 intergenic not near genes chr2R 20179075 intergenic not near genes chr2R 20179156 intergenic not near genes chr2R_60_20175001 chr2R_20175001 RAL-307_100b 1598 chr2R 20223926 20223985 chr2R 20224036 20224044 57 107 14.5 13.0 13.8 3.9 118 chr2R 20223926 intergenic not near genes chr2R 20223985 intergenic not near genes chr2R 20224044 intergenic not near genes chr2R_57_20220001 chr2R_20220001 RAL-307_100b 1599 chr2R 20338732 20338791 chr2R 20338837 20338896 21 103 10.0 0.0 5.0 3.5 164 chr2R 20338732 intergenic not near genes chr2R 20338814 intergenic not near genes chr2R 20338896 intergenic not near genes chr2R_21_20335001 chr2R_20335001 RAL-307_100b 1600 chr2R 20379132 20379142 chr2R 20379240 20379250 9 107 18.0 1.0 9.5 0.9 118 chr2R 20379132 intergenic not near genes chr2R 20379191 intergenic not near genes chr2R 20379250 intergenic not near genes chr2R_9_20375001 chr2R_20375001 RAL-307_100b 1601 chr2R 20382310 20382359 chr2R 20382420 20382469 32 106 17.5 12.0 14.8 2.0 159 chr2R 20382310 intergenic not near genes chr2R 20382390 intergenic not near genes chr2R 20382469 intergenic not near genes chr2R_32_20380001 chr2R_20380001 RAL-307_100b 1602 chr2R 20405058 20405114 chr2R 20405999 20406055 66 934 15.0 11.5 13.2 4.6 997 chr2R 20405058 intergenic not near genes chr2R 20405556 intergenic not near genes chr2R 20406055 intergenic not near genes chr2R_66_20405001 chr2R_20405001 RAL-307_100b 1603 chr2R 20422541 20422594 chr2R 20422645 20422698 18 104 11.5 9.5 10.5 1.6 157 chr2R 20422541 intergenic not near genes chr2R 20422620 intergenic not near genes chr2R 20422698 intergenic not near genes chr2R_18_20420001 chr2R_20420001 RAL-307_100b 1604 chr2R 20424398 20424451 chr2R 20424497 20424546 60 101 20.5 17.5 19.0 3.0 148 chr2R 20424398 5` UTR CG12484 + chr2R 20424472 5` UTR CG12484 + chr2R 20424546 5` UTR CG12484 + chr2R_60_20420001 chr2R_20420001 RAL-307_100b 1605 chr2R 20434101 20434103 chr2R 20434196 20434203 5 104 0.0 21.0 10.5 0.4 102 chr2R 20434101 intron CG12484 + chr2R 20434152 intron CG12484 + chr2R 20434203 intron CG12484 + chr2R_5_20430001 chr2R_20430001 RAL-307_100b 1606 chr2R 20502261 20502315 chr2R 20502400 20502454 54 136 9.5 16.5 13.0 3.9 193 chr2R 20502261 intergenic not near genes chr2R 20502358 intergenic not near genes chr2R 20502454 intergenic not near genes chr2R_54_20500001 chr2R_20500001 RAL-307_100b 1607 chr2R 20523020 20523069 chr2R 20523149 20523204 44 132 16.5 20.0 18.2 2.3 184 chr2R 20523020 intergenic not near genes chr2R 20523112 intergenic not near genes chr2R 20523204 intergenic not near genes chr2R_44_20520001 chr2R_20520001 RAL-307_100b 1608 chr2R 20555347 20555361 chr2R 20555446 20555476 6 107 0.0 13.5 6.8 0.8 129 chr2R 20555347 intergenic not near genes chr2R 20555412 intergenic not near genes chr2R 20555476 intergenic not near genes chr2R_6_20555001 chr2R_20555001 RAL-307_100b 1609 chr2R 20571277 20571302 chr2R 20571401 20571426 9 117 22.5 0.0 11.2 0.7 149 chr2R 20571277 intron qsm - chr2R 20571352 intron qsm - chr2R 20571426 intron qsm - chr2R_9_20570001 chr2R_20570001 RAL-307_100b 1610 chr2R 20572547 20572586 chr2R 20572662 20572701 44 113 19.5 12.5 16.0 2.6 154 chr2R 20572547 intron qsm - chr2R 20572624 intron qsm - chr2R 20572701 intron qsm - chr2R_44_20570001 chr2R_20570001 RAL-307_100b 1611 chr2R 20590641 20590669 chr2R 20590745 20590773 14 104 17.0 10.0 13.5 1.0 132 chr2R 20590641 intron bl + chr2R 20590707 intron bl + chr2R 20590773 intron bl + chr2R_14_20590001 chr2R_20590001 RAL-307_100b 1612 chr2R 20601694 20601695 chr2R 20601804 20601805 4 110 43.5 17.0 30.2 0.1 111 chr2R 20601694 intron bl + chr2R 20601750 intron bl + chr2R 20601805 intron bl + chr2R_4_20600001 chr2R_20600001 RAL-307_100b 1613 chr2R 20601719 20601753 chr2R 20601803 20601850 37 102 11.5 17.0 14.2 2.4 131 chr2R 20601719 intron bl + chr2R 20601784 intron bl + chr2R 20601850 intron bl + chr2R_37_20600001 chr2R_20600001 RAL-307_100b 1614 chr2R 20667343 20667347 chr2R 20667480 20667484 4 137 46.5 47.5 47.0 0.1 141 chr2R 20667343 intergenic Fem-1 -,exu - chr2R 20667414 intergenic exu -,Fem-1 - chr2R 20667484 3` UTR exu - chr2R_4_20665001 chr2R_20665001 RAL-307_100b 1615 chr2R 20691127 20691181 chr2R 20691565 20691619 23 437 13.5 0.0 6.8 2.9 492 chr2R 20691127 intergenic not near genes chr2R 20691373 intergenic not near genes chr2R 20691619 intergenic CR44659 + chr2R_23_20690001 chr2R_20690001 RAL-307_100b 1616 chr2R 20739419 20739443 chr2R 20744212 20744236 F-element 11 4791 28.0 16.5 22.2 0.5 4817 chr2R 20739419 intron dpr + chr2R 20741828 intron dpr + chr2R 20744236 intron dpr + chr2R_11_20740001 chr2R_20740001 RAL-307_100b 1617 chr2R 20739446 20739476 chr2R 20744211 20744240 F-element 29 4788 12.5 16.5 14.5 1.9 4794 chr2R 20739446 intron dpr + chr2R 20741843 intron dpr + chr2R 20744240 intron dpr + chr2R_29_20740001 chr2R_20740001 RAL-307_100b 1618 chr2R 20757444 20757457 chr2R 20757546 20757558 14 101 10.0 30.5 20.2 0.7 114 chr2R 20757444 intergenic not near genes chr2R 20757501 intergenic not near genes chr2R 20757558 intergenic not near genes chr2R_14_20755001 chr2R_20755001 RAL-307_100b 1619 chr2R 20783287 20783330 chr2R 20788084 20788127 F-element 42 4793 22.0 22.5 22.2 1.8 4840 chr2R 20783287 intergenic not near genes chr2R 20785707 intergenic not near genes chr2R 20788127 intergenic CG43666 - chr2R_42_20785001 chr2R_20785001 RAL-307_100b 1620 chr2R 20812218 20812276 chr2R 20812323 20812381 66 103 15.0 14.0 14.5 4.3 163 chr2R 20812218 intergenic not near genes chr2R 20812300 intergenic not near genes chr2R 20812381 intergenic not near genes chr2R_66_20810001 chr2R_20810001 RAL-307_100b 1621 chr2R 20817501 20817519 chr2R 20818031 20818049 16 528 31.5 17.5 24.5 0.6 548 chr2R 20817501 intergenic not near genes chr2R 20817775 intergenic not near genes chr2R 20818049 intergenic not near genes chr2R_16_20815001 chr2R_20815001 RAL-307_100b 1622 chr2R 20942347 20942373 chr2R 20942455 20942481 17 107 0.5 8.5 4.5 3.1 134 chr2R 20942347 intergenic not near genes chr2R 20942414 intergenic not near genes chr2R 20942481 intergenic not near genes chr2R_17_20940001 chr2R_20940001 RAL-307_100b 1623 chr2R 20951296 20951312 chr2R 20951406 20951422 12 109 23.0 8.0 15.5 0.7 126 chr2R 20951296 intergenic CG33704 + chr2R 20951359 intergenic CG33704 + chr2R 20951422 intergenic CG33704 + chr2R_12_20950001 chr2R_20950001 RAL-307_100b 1624 chr2R 20951314 20951315 chr2R 20951402 20951425 4 103 21.5 8.5 15.0 0.2 111 chr2R 20951314 intergenic CG33704 + chr2R 20951370 intergenic CG33704 + chr2R 20951425 intergenic CG33704 + chr2R_4_20950001 chr2R_20950001 RAL-307_100b 1625 chr2R 20962883 20962938 chr2R 20963006 20963061 66 120 15.0 13.5 14.2 4.3 178 chr2R 20962883 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963061 intergenic not near genes chr2R_66_20960001 chr2R_20960001 RAL-307_100b 1626 chr2R 20967003 20967051 chr2R 20967104 20967151 20 101 19.5 0.0 9.8 1.9 148 chr2R 20967003 intergenic not near genes chr2R 20967077 intergenic not near genes chr2R 20967151 intergenic not near genes chr2R_20_20965001 chr2R_20965001 RAL-307_100b 1627 chr2R 21075661 21075710 chr2R 21075769 21075822 58 108 12.5 9.5 11.0 4.8 161 chr2R 21075661 intron Treh + chr2R 21075742 intron Treh + chr2R 21075822 intron Treh + chr2R_58_21075001 chr2R_21075001 RAL-307_100b 1628 chr2R 21080284 21080295 chr2R 21080387 21080398 13 103 12.5 5.5 9.0 1.3 114 chr2R 21080284 intron Treh + chr2R 21080341 intron Treh + chr2R 21080398 intron Treh + chr2R_13_21080001 chr2R_21080001 RAL-307_100b 1629 chr2R 21103512 21103553 chr2R 21103617 21103658 46 104 14.0 22.0 18.0 2.4 146 chr2R 21103512 intron ktub + chr2R 21103585 intron ktub + chr2R 21103658 intron ktub + chr2R_46_21100001 chr2R_21100001 RAL-307_100b 1630 chr2R 21151135 21151145 chr2R 21153768 21153803 opus 10 2655 0.0 17.0 8.5 1.1 2668 chr2R 21151135 intron CG30389 - chr2R 21152469 intron CG30389 - chr2R 21153803 intron CG30389 - chr2R_10_21150001 chr2R_21150001 RAL-307_100b 1631 chr2R 21155942 21155950 chr2R 21156282 21156291 9 344 21.5 0.0 10.8 0.8 349 chr2R 21155942 intron CG30389 - chr2R 21156116 intron CG30389 - chr2R 21156291 intron CG30389 - chr2R_9_21155001 chr2R_21155001 RAL-307_100b 1632 chr2R 21158869 21158912 chr2R 21159018 21159061 35 149 19.0 17.0 18.0 1.8 192 chr2R 21158869 intron CG30389 - chr2R 21158965 intron CG30389 - chr2R 21159061 intron CG30389 - chr2R_35_21155001 chr2R_21155001 RAL-307_100b 1633 chr2R 21259643 21259665 chr2R 21259742 21259758 17 99 29.5 36.5 33.0 0.5 115 chr2R 21259643 intron Rgk3 + chr2R 21259700 intron Rgk3 + chr2R 21259758 intron Rgk3 + chr2R_17_21255001 chr2R_21255001 RAL-307_100b 1634 chr2R 21273939 21273999 chr2R 21274050 21274110 45 106 7.5 12.0 9.8 4.2 171 chr2R 21273939 intron Rgk3 + chr2R 21274024 intron Rgk3 + chr2R 21274110 intron Rgk3 + chr2R_45_21270001 chr2R_21270001 RAL-307_100b 1635 chr2R 21285407 21285435 chr2R 21285509 21285532 28 100 32.0 25.5 28.8 0.9 125 chr2R 21285407 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285470 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285532 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_28_21285001 chr2R_21285001 RAL-307_100b 1636 chr2R 21363111 21363185 chr2R 21363234 21363299 35 115 0.0 11.0 5.5 5.4 188 chr2R 21363111 intron cv-2 - chr2R 21363205 intron cv-2 - chr2R 21363299 intron cv-2 - chr2R_35_21360001 chr2R_21360001 RAL-307_100b 1637 chr2R 21381913 21381938 chr2R 21382025 21382050 12 111 20.0 2.0 11.0 1.0 137 chr2R 21381913 intergenic not near genes chr2R 21381982 intergenic not near genes chr2R 21382050 intergenic not near genes chr2R_12_21380001 chr2R_21380001 RAL-307_100b 1638 chr2R 21408346 21408399 chr2R 21408463 21408516 33 116 12.5 0.0 6.2 4.6 170 chr2R 21408346 intron Sdc - chr2R 21408431 intron Sdc - chr2R 21408516 intron Sdc - chr2R_33_21405001 chr2R_21405001 RAL-307_100b 1639 chr2R 21417255 21417266 chr2R 21417381 21417392 11 125 31.0 0.0 15.5 0.7 137 chr2R 21417255 intron Sdc - chr2R 21417324 intron Sdc - chr2R 21417392 intron Sdc - chr2R_11_21415001 chr2R_21415001 RAL-307_100b 1640 chr2R 21417267 21417274 chr2R 21417378 21417394 4 121 25.5 0.0 12.8 0.3 127 chr2R 21417267 intron Sdc - chr2R 21417330 intron Sdc - chr2R 21417394 intron Sdc - chr2R_4_21415001 chr2R_21415001 RAL-307_100b 1641 chr2R 21421313 21421353 chr2R 21421417 21421457 39 102 21.5 20.0 20.8 1.8 144 chr2R 21421313 intron Sdc - chr2R 21421385 intron Sdc - chr2R 21421457 intron Sdc - chr2R_39_21420001 chr2R_21420001 RAL-307_100b 1642 chr2R 21455062 21455115 chr2R 21455451 21455503 24 384 13.0 14.0 13.5 1.7 441 chr2R 21455062 intron Sdc - chr2R 21455282 intron Sdc - chr2R 21455503 intron Sdc - chr2R_24_21455001 chr2R_21455001 RAL-307_100b 1643 chr2R 21455116 21455116 chr2R 21455449 21455504 4 373 12.5 12.5 12.5 0.3 388 chr2R 21455116 intron Sdc - chr2R 21455310 intron Sdc - chr2R 21455504 intron Sdc - chr2R_4_21455001 chr2R_21455001 RAL-307_100b 1644 chr2R 21467739 21467745 chr2R 21467850 21467856 5 111 23.5 0.0 11.8 0.4 117 chr2R 21467739 intron Sdc - chr2R 21467798 intron Sdc - chr2R 21467856 intron Sdc - chr2R_5_21465001 chr2R_21465001 RAL-307_100b 1645 chr2R 21592818 21592858 chr2R 21592926 21592951 19 97 20.5 30.0 25.2 0.7 133 chr2R 21592818 intergenic not near genes chr2R 21592884 intergenic not near genes chr2R 21592951 intergenic not near genes chr2R_19_21590001 chr2R_21590001 RAL-307_100b 1646 chr2R 21611731 21611783 chr2R 21611866 21611918 62 132 17.5 14.5 16.0 3.6 187 chr2R 21611731 intron CG15673 - chr2R 21611824 intron CG15673 - chr2R 21611918 intron CG15673 - chr2R_62_21610001 chr2R_21610001 RAL-307_100b 1647 chr2R 21616036 21616096 chr2R 21617362 21617411 56 1318 113.5 92.0 102.8 0.5 1375 chr2R 21616036 exon CG18870 - chr2R 21616724 exon CG18870 - chr2R 21617411 exon clt - chr2R_56_21615001 chr2R_21615001 RAL-307_100b 1648 chr2R 21615425 21615452 chr2R 21619834 21619861 26 4411 106.0 116.5 111.2 0.2 4436 chr2R 21615425 3` UTR CG18870 - chr2R 21617643 exon clt - chr2R 21619861 3` UTR PTP-ER - chr2R_26_21615001 chr2R_21615001 RAL-307_100b 1649 chr2R 21615424 21615462 chr2R 21619864 21619891 28 4414 116.0 99.5 107.8 0.3 4467 chr2R 21615424 3` UTR CG18870 - chr2R 21617658 exon clt - chr2R 21619891 3` UTR PTP-ER - chr2R_28_21615001 chr2R_21615001 RAL-307_100b 1650 chr2R 21721551 21721611 chr2R 21721664 21721723 36 108 14.5 6.5 10.5 3.1 172 chr2R 21721551 intron LBR + chr2R 21721637 intron LBR + chr2R 21721723 intron LBR + chr2R_36_21720001 chr2R_21720001 RAL-307_100b 1651 chr2R 21735666 21735710 chr2R 21735854 21735892 39 185 11.5 18.0 14.8 2.5 226 chr2R 21735666 intergenic not near genes chr2R 21735779 intergenic not near genes chr2R 21735892 intergenic not near genes chr2R_39_21735001 chr2R_21735001 RAL-307_100b 1652 chr2R 21738262 21738290 chr2R 21747437 21747475 roo 23 9180 17.5 15.5 16.5 1.3 9213 chr2R 21738262 intergenic not near genes chr2R 21742868 intergenic not near genes chr2R 21747475 intergenic not near genes chr2R_23_21740001 chr2R_21740001 RAL-307_100b 1653 chr2R 21738291 21738310 chr2R 21747435 21747460 roo 19 9153 6.0 14.5 10.2 1.7 9169 chr2R 21738291 intergenic not near genes chr2R 21742876 intergenic not near genes chr2R 21747460 intergenic not near genes chr2R_19_21740001 chr2R_21740001 RAL-307_100b 1654 chr2R 21753064 21753114 chr2R 21753574 21753624 roo 55 508 18.0 15.0 16.5 3.1 560 chr2R 21753064 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753624 intergenic not near genes chr2R_55_21750001 chr2R_21750001 RAL-307_100b 1655 chr2R 21777402 21777444 chr2R 21777510 21777552 27 107 13.0 13.0 13.0 1.9 150 chr2R 21777402 intergenic not near genes chr2R 21777477 intergenic not near genes chr2R 21777552 intergenic not near genes chr2R_27_21775001 chr2R_21775001 RAL-307_100b 1656 chr2R 21796429 21796487 chr2R 21796538 21796576 52 107 12.5 15.0 13.8 3.5 147 chr2R 21796429 5` UTR CG34204 + chr2R 21796502 5` UTR CG34204 + chr2R 21796576 exon CG34204 + chr2R_52_21795001 chr2R_21795001 RAL-307_100b 1657 chr2R 21809504 21809511 chr2R 21817769 21817776 roo 7 8264 40.5 22.0 31.2 0.2 8272 chr2R 21809504 intergenic not near genes chr2R 21813640 intergenic not near genes chr2R 21817776 intergenic not near genes chr2R_7_21810001 chr2R_21810001 RAL-307_100b 1658 chr2R 21809512 21809558 chr2R 21817766 21817803 roo 32 8261 15.0 20.0 17.5 1.7 8291 chr2R 21809512 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817803 intergenic not near genes chr2R_32_21810001 chr2R_21810001 RAL-307_100b 1659 chr2R 21818854 21818913 chr2R 21818966 21819026 28 112 14.0 1.5 7.8 3.2 172 chr2R 21818854 intergenic not near genes chr2R 21818940 intergenic not near genes chr2R 21819026 intergenic not near genes chr2R_28_21815001 chr2R_21815001 RAL-307_100b 1660 chr2R 21855585 21855598 chr2R 21855687 21855695 13 100 20.5 13.5 17.0 0.7 110 chr2R 21855585 intergenic not near genes chr2R 21855640 intergenic not near genes chr2R 21855695 intergenic not near genes chr2R_13_21855001 chr2R_21855001 RAL-307_100b 1661 chr2R 21855599 21855612 chr2R 21855686 21855713 14 100 14.5 13.5 14.0 0.9 114 chr2R 21855599 intergenic not near genes chr2R 21855656 intergenic not near genes chr2R 21855713 intergenic not near genes chr2R_14_21855001 chr2R_21855001 RAL-307_100b 1662 chr2R 21868988 21868993 chr2R 21869103 21869108 4 115 11.0 0.0 5.5 0.6 120 chr2R 21868988 intergenic not near genes chr2R 21869048 intergenic not near genes chr2R 21869108 intergenic not near genes chr2R_4_21865001 chr2R_21865001 RAL-307_100b 1663 chr2R 21888275 21888289 chr2R 21888411 21888425 13 135 0.0 24.5 12.2 1.0 150 chr2R 21888275 intron Fili + chr2R 21888350 intron Fili + chr2R 21888425 intron Fili + chr2R_13_21885001 chr2R_21885001 RAL-307_100b 1664 chr2R 21906245 21906303 chr2R 21906371 21906383 34 124 12.5 8.0 10.2 3.0 138 chr2R 21906245 intron Fili + chr2R 21906314 intron Fili + chr2R 21906383 intron Fili + chr2R_34_21905001 chr2R_21905001 RAL-307_100b 1665 chr2R 21916080 21916110 chr2R 21916182 21916183 16 100 5.5 0.0 2.8 4.2 103 chr2R 21916080 intron Fili + chr2R 21916132 intron Fili + chr2R 21916183 intron Fili + chr2R_16_21915001 chr2R_21915001 RAL-307_100b 1666 chr2R 21935623 21935674 chr2R 21935727 21935778 47 102 11.5 16.5 14.0 3.1 155 chr2R 21935623 intron,intron Fili +,CG43742 - chr2R 21935700 intron,exon Fili +,CG43742 - chr2R 21935778 intron,exon Fili +,CG43742 - chr2R_47_21935001 chr2R_21935001 RAL-307_100b 1667 chr2R 21954430 21954443 chr2R 21954517 21954533 5 93 27.0 32.0 29.5 0.2 103 chr2R 21954430 exon CG13494 - chr2R 21954482 exon CG13494 - chr2R 21954533 exon CG13494 - chr2R_5_21950001 chr2R_21950001 RAL-307_100b 1668 chr2R 22004271 22004318 chr2R 22004390 22004437 30 116 14.0 0.0 7.0 3.8 166 chr2R 22004271 intron CG34370 - chr2R 22004354 intron CG34370 - chr2R 22004437 intron CG34370 - chr2R_30_22000001 chr2R_22000001 RAL-307_100b 1669 chr2R 22029499 22029535 chr2R 22029602 22029638 34 101 9.5 0.5 5.0 5.7 139 chr2R 22029499 intron CG34370 - chr2R 22029568 intron CG34370 - chr2R 22029638 intron CG34370 - chr2R_34_22025001 chr2R_22025001 RAL-307_100b 1670 chr2R 22035516 22035574 chr2R 22035628 22035671 103 108 21.0 27.5 24.2 4.1 155 chr2R 22035516 intron,exon CG34370 -,CG9308 + chr2R 22035594 intron,3` UTR CG34370 -,CG9308 + chr2R 22035671 intron CG34370 - chr2R_103_22035001 chr2R_22035001 RAL-307_100b 1671 chr2R 22034392 22034451 chr2R 22035953 22036010 32 1566 113.5 120.0 116.8 0.3 1618 chr2R 22034392 intron CG34370 - chr2R 22035201 intron,exon CG34370 -,CG9308 + chr2R 22036010 intron CG34370 - chr2R_32_22035001 chr2R_22035001 RAL-307_100b 1672 chr2R 22072681 22072685 chr2R 22072791 22072795 4 110 29.5 30.0 29.8 0.1 114 chr2R 22072681 intron CG11474 - chr2R 22072738 intron CG11474 - chr2R 22072795 intron CG11474 - chr2R_4_22070001 chr2R_22070001 RAL-307_100b 1673 chr2R 22072687 22072708 chr2R 22072782 22072813 26 105 20.5 21.5 21.0 1.2 126 chr2R 22072687 intron CG11474 - chr2R 22072750 intron CG11474 - chr2R 22072813 exon CG11474 - chr2R_26_22070001 chr2R_22070001 RAL-307_100b 1674 chr2R 22072709 22072713 chr2R 22072771 22072806 5 96 19.0 14.0 16.5 0.3 97 chr2R 22072709 intron CG11474 - chr2R 22072758 intron CG11474 - chr2R 22072806 exon CG11474 - chr2R_5_22070001 chr2R_22070001 RAL-307_100b 1675 chr2R 22132266 22132285 chr2R 22132371 22132390 17 104 22.0 16.0 19.0 0.8 124 chr2R 22132266 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132390 intergenic not near genes chr2R_17_22130001 chr2R_22130001 RAL-307_100b 1676 chr2R 22185650 22185693 chr2R 22185772 22185811 19 121 18.0 3.0 10.5 1.7 161 chr2R 22185650 exon MED16 + chr2R 22185730 3` UTR MED16 + chr2R 22185811 3` UTR MED16 + chr2R_19_22185001 chr2R_22185001 RAL-307_100b 1677 chr2R 22189420 22189476 chr2R 22189573 22189628 27 149 10.5 4.0 7.2 3.3 208 chr2R 22189420 3` UTR Vps35 + chr2R 22189524 3` UTR Vps35 + chr2R 22189628 3` UTR Vps35 + chr2R_27_22185001 chr2R_22185001 RAL-307_100b 1678 chr2R 22292160 22292208 chr2R 22292374 22292412 42 210 18.0 14.0 16.0 2.5 252 chr2R 22292160 5` UTR CR43422 + chr2R 22292286 5` UTR CR43422 + chr2R 22292412 intergenic CR43422 + chr2R_42_22290001 chr2R_22290001 RAL-307_100b 1679 chr2R 4825123 4825123 chr2R 22311212 22311217 6 17486092 56.5 84.0 70.2 0.1 17486094 chr2R 4825123 intergenic not near genes chr2R 13568170 intergenic not near genes chr2R 22311217 intron wdp - chr2R_6_13565001 chr2R_13565001 RAL-307_100b 1680 chr2R 22349672 22349704 chr2R 22351481 22351500 jockey 27 1807 25.5 20.5 23.0 1.1 1828 chr2R 22349672 intron Liprin-gamma - chr2R 22350586 intron Liprin-gamma - chr2R 22351500 intron Liprin-gamma - chr2R_27_22350001 chr2R_22350001 RAL-307_100b 1681 chr2R 22349705 22349722 chr2R 22351477 22351531 jockey 17 1803 17.5 19.0 18.2 0.9 1826 chr2R 22349705 intron Liprin-gamma - chr2R 22350618 intron Liprin-gamma - chr2R 22351531 intron Liprin-gamma - chr2R_17_22350001 chr2R_22350001 RAL-307_100b 1682 chr2R 22360175 22360211 chr2R 22360284 22360299 26 105 12.0 15.5 13.8 1.8 124 chr2R 22360175 intron Liprin-gamma - chr2R 22360237 intron Liprin-gamma - chr2R 22360299 intron Liprin-gamma - chr2R_26_22360001 chr2R_22360001 RAL-307_100b 1683 chr2R 22360362 22360372 chr2R 22360819 22360829 jockey 12 458 34.5 16.5 25.5 0.5 467 chr2R 22360362 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_12_22360001 chr2R_22360001 RAL-307_100b 1684 chr2R 22360373 22360381 chr2R 22360815 22360828 jockey 5 447 30.0 14.5 22.2 0.2 455 chr2R 22360373 intron Liprin-gamma - chr2R 22360600 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-307_100b 1685 chr2R 22374614 22374635 chr2R 22374726 22374747 19 111 12.0 11.5 11.8 1.5 133 chr2R 22374614 3` UTR CR44759 - chr2R 22374680 3` UTR CR44759 - chr2R 22374747 3` UTR CR44759 - chr2R_19_22370001 chr2R_22370001 RAL-307_100b 1686 chr2R 22380337 22380392 chr2R 22380453 22380508 28 113 12.0 1.5 6.8 3.6 171 chr2R 22380337 intron wrapper + chr2R 22380422 intron wrapper + chr2R 22380508 intron wrapper + chr2R_28_22380001 chr2R_22380001 RAL-307_100b 1687 chr2R 22382876 22382889 chr2R 22382976 22382995 12 104 17.0 26.5 21.8 0.5 119 chr2R 22382876 intergenic wrapper +,CG13506 + chr2R 22382936 intergenic CG13506 +,wrapper + chr2R 22382995 intergenic CG13506 +,wrapper + chr2R_12_22380001 chr2R_22380001 RAL-307_100b 1688 chr2R 22442886 22442888 chr2R 22443002 22443003 4 116 47.5 17.0 32.2 0.1 117 chr2R 22442886 intergenic not near genes chr2R 22442944 intergenic not near genes chr2R 22443003 intergenic not near genes chr2R_4_22440001 chr2R_22440001 RAL-307_100b 1689 chr2R 22460355 22460403 chr2R 22460459 22460472 34 101 17.5 15.5 16.5 1.9 117 chr2R 22460355 intron CG10384 + chr2R 22460414 intron CG10384 + chr2R 22460472 intron CG10384 + chr2R_34_22460001 chr2R_22460001 RAL-307_100b 1690 chr2R 22460404 22460406 chr2R 22460458 22460510 5 86 15.5 15.0 15.2 0.3 106 chr2R 22460404 intron CG10384 + chr2R 22460457 intron CG10384 + chr2R 22460510 intron CG10384 + chr2R_5_22460001 chr2R_22460001 RAL-307_100b 1691 chr2R 22503855 22503896 chr2R 22503975 22504016 36 119 4.0 12.0 8.0 4.0 161 chr2R 22503855 intron px - chr2R 22503936 intron px - chr2R 22504016 intron px - chr2R_36_22500001 chr2R_22500001 RAL-307_100b 1692 chr2R 22525724 22525781 chr2R 22529304 22529356 jockey 53 3576 18.0 23.0 20.5 2.5 3632 chr2R 22525724 intron px - chr2R 22527540 intron px - chr2R 22529356 intron px - chr2R_53_22525001 chr2R_22525001 RAL-307_100b 1693 chr2R 22580436 22580444 chr2R 22586601 22586619 diver 8 6172 16.0 9.0 12.5 0.6 6183 chr2R 22580436 intron dnr1 - chr2R 22583528 intron dnr1 - chr2R 22586619 intron dnr1 - chr2R_8_22580001 chr2R_22580001 RAL-307_100b 1694 chr2R 22588125 22588139 chr2R 22588245 22588254 10 119 37.0 35.5 36.2 0.3 129 chr2R 22588125 intron dnr1 - chr2R 22588190 intron dnr1 - chr2R 22588254 intron dnr1 - chr2R_10_22585001 chr2R_22585001 RAL-307_100b 1695 chr2R 22588140 22588158 chr2R 22588244 22588278 14 114 29.0 35.0 32.0 0.4 138 chr2R 22588140 intron dnr1 - chr2R 22588209 intron dnr1 - chr2R 22588278 intron dnr1 - chr2R_14_22585001 chr2R_22585001 RAL-307_100b 1696 chr2R 22774943 22774994 chr2R 22775387 22775420 jockey 39 440 21.5 21.0 21.2 1.8 477 chr2R 22774943 intron CG42260 - chr2R 22775182 intron CG42260 - chr2R 22775420 intron CG42260 - chr2R_39_22775001 chr2R_22775001 RAL-307_100b 1697 chr2R 22834763 22834800 chr2R 22834901 22834922 18 136 0.5 4.0 2.2 5.6 159 chr2R 22834763 intron CG12490 + chr2R 22834842 intron CG12490 + chr2R 22834922 intron CG12490 + chr2R_18_22830001 chr2R_22830001 RAL-307_100b 1698 chr2R 22834143 22834281 chr2R 22836176 22836326 27 2026 102.5 51.5 77.0 0.3 2183 chr2R 22834143 exon CG30265 + chr2R 22835234 exon CG12490 + chr2R 22836326 intron CG12490 + chr2R_27_22835001 chr2R_22835001 RAL-307_100b 1699 chr2R 22834880 22834922 chr2R 22837478 22837520 11 2599 4.0 50.0 27.0 0.4 2640 chr2R 22834880 intron CG12490 + chr2R 22836200 exon CG12490 + chr2R 22837520 intron CG9825 + chr2R_11_22835001 chr2R_22835001 RAL-307_100b 1700 chr2R 22839467 22839526 chr2R 22839571 22839635 31 102 9.5 1.0 5.2 5.0 168 chr2R 22839467 intergenic CG9825 + chr2R 22839551 intergenic CG9825 + chr2R 22839635 intergenic CG9825 + chr2R_31_22835001 chr2R_22835001 RAL-307_100b 1701 chr2R 22843028 22843046 chr2R 22845019 22845037 flea 12 1991 18.5 22.0 20.2 0.6 2009 chr2R 22843028 intergenic CG9826 + chr2R 22844032 intergenic not near genes chr2R 22845037 intergenic not near genes chr2R_12_22840001 chr2R_22840001 RAL-307_100b 1702 chr2R 22941796 22941851 chr2R 22941900 22941914 59 102 13.5 20.0 16.8 3.3 118 chr2R 22941796 intergenic CG42694 + chr2R 22941855 intergenic CG42694 + chr2R 22941914 5` UTR CG42694 + chr2R_59_22940001 chr2R_22940001 RAL-307_100b 1703 chr2R 22953365 22953384 chr2R 22953484 22953486 4 114 14.0 5.5 9.8 0.4 121 chr2R 22953365 intron CR32835 - chr2R 22953426 3` UTR CR32835 - chr2R 22953486 3` UTR CR32835 - chr2R_4_22950001 chr2R_22950001 RAL-307_100b 1704 chr2R 22957029 22957060 chr2R 22957133 22957164 28 102 15.5 20.5 18.0 1.5 135 chr2R 22957029 intergenic CR44780 - chr2R 22957096 intergenic CR44780 - chr2R 22957164 intergenic CR44780 - chr2R_28_22955001 chr2R_22955001 RAL-307_100b 1705 chr2R 22958779 22958792 chr2R 22963895 22963900 flea 6 5116 23.0 14.5 18.8 0.3 5121 chr2R 22958779 intergenic not near genes chr2R 22961340 intergenic not near genes chr2R 22963900 intergenic not near genes chr2R_6_22960001 chr2R_22960001 RAL-307_100b 1706 chr2R 22958793 22958813 chr2R 22963891 22963896 flea 5 5104 12.5 14.0 13.2 0.4 5103 chr2R 22958793 intergenic not near genes chr2R 22961344 intergenic not near genes chr2R 22963896 intergenic not near genes chr2R_5_22960001 chr2R_22960001 RAL-307_100b 1707 chr2R 23008778 23008786 chr2R 23008893 23008896 8 117 24.0 14.0 19.0 0.4 118 chr2R 23008778 intron twi + chr2R 23008837 intron twi + chr2R 23008896 intron twi + chr2R_8_23005001 chr2R_23005001 RAL-307_100b 1708 chr2R 23008794 23008827 chr2R 23008889 23008948 29 114 18.0 11.0 14.5 1.9 154 chr2R 23008794 intron twi + chr2R 23008871 intron twi + chr2R 23008948 intron twi + chr2R_29_23005001 chr2R_23005001 RAL-307_100b 1709 chr2R 23131324 23131371 chr2R 23131451 23131472 32 122 10.5 15.5 13.0 2.3 148 chr2R 23131324 intergenic not near genes chr2R 23131398 intergenic not near genes chr2R 23131472 intergenic not near genes chr2R_32_23130001 chr2R_23130001 RAL-307_100b 1710 chr2R 23134816 23134830 chr2R 23134924 23134938 9 106 1.0 22.0 11.5 0.7 122 chr2R 23134816 intergenic not near genes chr2R 23134877 intergenic not near genes chr2R 23134938 intergenic not near genes chr2R_9_23130001 chr2R_23130001 RAL-307_100b 1711 chr2R 23134831 23134833 chr2R 23134939 23134941 4 108 1.0 28.0 14.5 0.3 110 chr2R 23134831 intergenic not near genes chr2R 23134886 intergenic not near genes chr2R 23134941 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RAL-307_100b 1712 chr2R 23134836 23134849 chr2R 23134923 23134937 9 99 1.0 21.5 11.2 0.7 101 chr2R 23134836 intergenic not near genes chr2R 23134886 intergenic not near genes chr2R 23134937 intergenic not near genes chr2R_9_23130001 chr2R_23130001 RAL-307_100b 1713 chr2R 23151599 23151607 chr2R 23151703 23151711 8 104 13.0 8.5 10.8 0.7 112 chr2R 23151599 intergenic not near genes chr2R 23151655 intergenic not near genes chr2R 23151711 intergenic not near genes chr2R_8_23150001 chr2R_23150001 RAL-307_100b 1714 chr2R 23175012 23175068 chr2R 23175114 23175165 48 100 12.0 12.0 12.0 3.7 153 chr2R 23175012 intron CG34371 - chr2R 23175088 intron CG34371 - chr2R 23175165 intron CG34371 - chr2R_48_23175001 chr2R_23175001 RAL-307_100b 1715 chr2R 23184289 23184295 chr2R 23184354 23184405 12 96 0.5 10.5 5.5 1.8 116 chr2R 23184289 intron,intron CG34371 -,CG13539 + chr2R 23184347 intron,intron CG34371 -,CG13539 + chr2R 23184405 intron,intron CG34371 -,CG13539 + chr2R_12_23180001 chr2R_23180001 RAL-307_100b 1716 chr2R 23186063 23186118 chr2R 23186233 23186263 27 166 12.5 9.5 11.0 2.2 200 chr2R 23186063 intron CG34371 - chr2R 23186163 intron CG34371 - chr2R 23186263 intron CG34371 - chr2R_27_23185001 chr2R_23185001 RAL-307_100b 1717 chr2R 23188529 23188584 chr2R 23188632 23188687 34 101 15.0 15.0 15.0 2.1 158 chr2R 23188529 intron CG34371 - chr2R 23188608 intron CG34371 - chr2R 23188687 intron CG34371 - chr2R_34_23185001 chr2R_23185001 RAL-307_100b 1718 chr2R 23189999 23190001 chr2R 23190103 23190106 7 104 35.0 3.0 19.0 0.3 107 chr2R 23189999 intron CG34371 - chr2R 23190052 intron CG34371 - chr2R 23190106 intron CG34371 - chr2R_7_23190001 chr2R_23190001 RAL-307_100b 1719 chr2R 23190002 23190004 chr2R 23190102 23190109 5 104 35.0 3.0 19.0 0.2 107 chr2R 23190002 intron CG34371 - chr2R 23190056 intron CG34371 - chr2R 23190109 intron CG34371 - chr2R_5_23190001 chr2R_23190001 RAL-307_100b 1720 chr2R 23190005 23190020 chr2R 23190100 23190125 18 103 32.0 3.5 17.8 1.0 120 chr2R 23190005 intron CG34371 - chr2R 23190065 intron CG34371 - chr2R 23190125 intron CG34371 - chr2R_18_23190001 chr2R_23190001 RAL-307_100b 1721 chr2R 23207831 23207843 chr2R 23207934 23207940 4 102 37.0 10.5 23.8 0.2 109 chr2R 23207831 intergenic not near genes chr2R 23207886 intergenic not near genes chr2R 23207940 intergenic not near genes chr2R_4_23205001 chr2R_23205001 RAL-307_100b 1722 chr2R 23207844 23207854 chr2R 23207932 23207946 14 98 32.5 9.5 21.0 0.6 102 chr2R 23207844 intergenic not near genes chr2R 23207895 intergenic not near genes chr2R 23207946 intergenic not near genes chr2R_14_23205001 chr2R_23205001 RAL-307_100b 1723 chr2R 23231938 23231998 chr2R 23232079 23232104 30 142 0.0 12.0 6.0 4.3 166 chr2R 23231938 intergenic not near genes chr2R 23232021 intergenic not near genes chr2R 23232104 intergenic not near genes chr2R_30_23230001 chr2R_23230001 RAL-307_100b 1724 chr2R 23275636 23275645 chr2R 23275753 23275762 10 117 25.0 18.5 21.8 0.4 126 chr2R 23275636 intergenic ord - chr2R 23275699 intergenic ord - chr2R 23275762 intergenic ord - chr2R_10_23275001 chr2R_23275001 RAL-307_100b 1725 chr2R 23275646 23275684 chr2R 23275743 23275781 34 110 5.5 15.5 10.5 3.0 135 chr2R 23275646 intergenic ord - chr2R 23275714 intergenic ord - chr2R 23275781 intergenic ord - chr2R_34_23275001 chr2R_23275001 RAL-307_100b 1726 chr2R 23291306 23291341 chr2R 23291409 23291423 27 99 15.0 2.5 8.8 2.8 117 chr2R 23291306 3` UTR CR44783 - chr2R 23291364 3` UTR CR44783 - chr2R 23291423 intergenic CR44783 - chr2R_27_23290001 chr2R_23290001 RAL-307_100b 1727 chr2R 23349583 23349641 chr2R 23349874 23349892 51 282 21.5 21.0 21.2 2.3 309 chr2R 23349583 intergenic not near genes chr2R 23349738 intergenic not near genes chr2R 23349892 intergenic not near genes chr2R_51_23345001 chr2R_23345001 RAL-307_100b 1728 chr2R 23356254 23356267 chr2R 23356368 23356381 17 113 36.5 20.5 28.5 0.6 127 chr2R 23356254 3` UTR Rpi + chr2R 23356318 3` UTR Rpi + chr2R 23356381 3` UTR,3` UTR Rpi +,CG3500 - chr2R_17_23355001 chr2R_23355001 RAL-307_100b 1729 chr2R 23356268 23356277 chr2R 23356366 23356390 14 110 34.0 19.0 26.5 0.5 122 chr2R 23356268 3` UTR Rpi + chr2R 23356329 3` UTR Rpi + chr2R 23356390 3` UTR,3` UTR Rpi +,CG3500 - chr2R_14_23355001 chr2R_23355001 RAL-307_100b 1730 chr2R 23356278 23356310 chr2R 23356365 23356399 55 104 13.5 17.5 15.5 3.3 121 chr2R 23356278 3` UTR Rpi + chr2R 23356338 3` UTR Rpi + chr2R 23356399 3` UTR,3` UTR Rpi +,CG3500 - chr2R_55_23355001 chr2R_23355001 RAL-307_100b 1731 chr2R 23393916 23393970 chr2R 23394297 23394351 52 378 10.0 10.5 10.2 4.6 435 chr2R 23393916 intron CG3530 - chr2R 23394134 intron CG3530 - chr2R 23394351 intron CG3530 - chr2R_52_23390001 chr2R_23390001 RAL-307_100b 1732 chr2R 23402639 23402642 chr2R 23407710 23407743 flea 6 5096 0.0 24.0 12.0 0.5 5104 chr2R 23402639 intergenic CG3520 - chr2R 23405191 intergenic not near genes chr2R 23407743 intergenic not near genes chr2R_6_23405001 chr2R_23405001 RAL-307_100b 1733 chr2R 23437204 23437243 chr2R 23437306 23437336 38 98 21.0 11.5 16.2 2.2 132 chr2R 23437204 intergenic not near genes chr2R 23437270 intergenic not near genes chr2R 23437336 intergenic not near genes chr2R_38_23435001 chr2R_23435001 RAL-307_100b 1734 chr2R 23461124 23461140 chr2R 23461226 23461242 14 102 47.0 26.0 36.5 0.4 118 chr2R 23461124 intron CG43795 + chr2R 23461183 intron CG43795 + chr2R 23461242 intron CG43795 + chr2R_14_23460001 chr2R_23460001 RAL-307_100b 1735 chr2R 23529558 23529604 chr2R 23537149 23537175 412 26 7589 16.0 22.5 19.2 1.3 7617 chr2R 23529558 intron bw - chr2R 23533366 intron bw - chr2R 23537175 exon bw - chr2R_26_23530001 chr2R_23530001 RAL-307_100b 1736 chr2R 23588070 23588075 chr2R 23588173 23588177 8 102 18.0 13.0 15.5 0.5 107 chr2R 23588070 intron apt + chr2R 23588124 intron apt + chr2R 23588177 intron apt + chr2R_8_23585001 chr2R_23585001 RAL-307_100b 1737 chr2R 23607011 23607193 chr2R 23607117 23607311 91 109 5.5 7.0 6.2 12.6 300 chr2R 23607011 intron CG17664 - chr2R 23607161 intron CG17664 - chr2R 23607311 intron CG17664 - chr2R_91_23605001 chr2R_23605001 RAL-307_100b 1738 chr2R 23771251 23771303 chr2R 23771357 23771406 14 103 9.5 0.0 4.8 2.4 155 chr2R 23771251 intron CG9850 - chr2R 23771328 intron CG9850 - chr2R 23771406 intron CG9850 - chr2R_14_23770001 chr2R_23770001 RAL-307_100b 1739 chr2R 23784446 23784506 chr2R 23784549 23784609 60 100 17.0 18.0 17.5 3.2 163 chr2R 23784446 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784609 intron CG9850 - chr2R_60_23780001 chr2R_23780001 RAL-307_100b 1740 chr2R 23819118 23819142 chr2R 23819238 23819262 20 119 33.0 16.0 24.5 0.8 144 chr2R 23819118 intergenic not near genes chr2R 23819190 intergenic not near genes chr2R 23819262 intergenic not near genes chr2R_20_23815001 chr2R_23815001 RAL-307_100b 1741 chr2R 23886664 23886722 chr2R 23886777 23886810 70 105 10.0 13.5 11.8 5.5 146 chr2R 23886664 intergenic CG5597 + chr2R 23886737 intergenic CG5597 + chr2R 23886810 intergenic CG5597 + chr2R_70_23885001 chr2R_23885001 RAL-307_100b 1742 chr2R 23914272 23914330 chr2R 23921921 23921976 412 64 7644 16.0 19.0 17.5 3.5 7704 chr2R 23914272 exon kcc + chr2R 23918124 intron kcc + chr2R 23921976 exon kcc + chr2R_64_23915001 chr2R_23915001 RAL-307_100b 1743 chr2R 24031356 24031413 chr2R 24031465 24031510 74 105 15.5 13.0 14.2 4.9 154 chr2R 24031356 5` UTR CG30172 - chr2R 24031433 intergenic CG30172 -,Chi - chr2R 24031510 intergenic Chi -,CG30172 - chr2R_74_24030001 chr2R_24030001 RAL-307_100b 1744 chr2R 24144059 24144093 chr2R 24144176 24144210 26 116 15.5 3.0 9.2 2.5 151 chr2R 24144059 intron Dat + chr2R 24144134 intron Dat + chr2R 24144210 intron Dat + chr2R_26_24140001 chr2R_24140001 RAL-307_100b 1745 chr2R 24147045 24147052 chr2R 24154648 24154655 412 8 7602 43.0 26.0 34.5 0.2 7610 chr2R 24147045 intron Dat + chr2R 24150850 intron Dat + chr2R 24154655 intron Dat + chr2R_8_24150001 chr2R_24150001 RAL-307_100b 1746 chr2R 24147053 24147098 chr2R 24154646 24154686 412 43 7597 16.0 24.0 20.0 2.0 7633 chr2R 24147053 intron Dat + chr2R 24150870 intron Dat + chr2R 24154686 intron Dat + chr2R_43_24150001 chr2R_24150001 RAL-307_100b 1747 chr2R 24177210 24177268 chr2R 24184720 24184778 412 32 7509 14.0 1.5 7.8 3.6 7568 chr2R 24177210 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184778 3` UTR Nop60B + chr2R_32_24180001 chr2R_24180001 RAL-307_100b 1748 chr2R 24228374 24228430 chr2R 24228475 24228484 44 83 10.5 17.0 13.8 3.0 110 chr2R 24228374 intron CG30419 - chr2R 24228429 intron CG30419 - chr2R 24228484 intron CG30419 - chr2R_44_24225001 chr2R_24225001 RAL-307_100b 1749 chr2R 24272801 24272814 chr2R 24272904 24272917 roo 7 102 28.5 35.5 32.0 0.2 116 chr2R 24272801 intergenic not near genes chr2R 24272859 intergenic not near genes chr2R 24272917 intergenic not near genes chr2R_7_24270001 chr2R_24270001 RAL-307_100b 1750 chr2R 24287107 24287165 chr2R 24287209 24287260 59 99 16.5 18.5 17.5 3.2 153 chr2R 24287107 intron nvy + chr2R 24287184 intron nvy + chr2R 24287260 intron nvy + chr2R_59_24285001 chr2R_24285001 RAL-307_100b 1751 chr2R 24292545 24292602 chr2R 24292684 24292741 52 134 12.5 12.5 12.5 3.9 196 chr2R 24292545 intergenic not near genes chr2R 24292643 intergenic not near genes chr2R 24292741 intergenic not near genes chr2R_52_24290001 chr2R_24290001 RAL-307_100b 1752 chr2R 24303499 24303535 chr2R 24303602 24303634 38 97 17.5 18.0 17.8 2.0 135 chr2R 24303499 intergenic not near genes chr2R 24303566 intergenic not near genes chr2R 24303634 intergenic not near genes chr2R_38_24300001 chr2R_24300001 RAL-307_100b 1753 chr2R 24303536 24303537 chr2R 24303601 24303609 4 77 17.0 18.0 17.5 0.2 73 chr2R 24303536 intergenic not near genes chr2R 24303572 intergenic not near genes chr2R 24303609 intergenic not near genes chr2R_4_24300001 chr2R_24300001 RAL-307_100b 1754 chr2R 24349081 24349134 chr2R 24349184 24349237 48 96 17.5 14.5 16.0 2.8 156 chr2R 24349081 intron bs + chr2R 24349159 intron bs + chr2R 24349237 intron bs + chr2R_48_24345001 chr2R_24345001 RAL-307_100b 1755 chr2R 24352575 24352578 chr2R 24352659 24352681 10 95 31.0 11.0 21.0 0.5 106 chr2R 24352575 intron,intron bs +,CR44811 - chr2R 24352628 intron,intron bs +,CR44811 - chr2R 24352681 intron,intron bs +,CR44811 - chr2R_10_24350001 chr2R_24350001 RAL-307_100b 1756 chr2R 24352579 24352606 chr2R 24352652 24352709 21 94 8.0 10.0 9.0 2.1 130 chr2R 24352579 intron,intron bs +,CR44811 - chr2R 24352644 intron,intron bs +,CR44811 - chr2R 24352709 intron,intron bs +,CR44811 - chr2R_21_24350001 chr2R_24350001 RAL-307_100b 1757 chr2R 24353403 24353458 chr2R 24361790 24361829 roo 26 8383 18.0 21.5 19.8 1.2 8426 chr2R 24353403 intron,intron bs +,CR44811 - chr2R 24357616 intron,intron bs +,CR44811 - chr2R 24361829 intron,intron bs +,CR44811 - chr2R_26_24355001 chr2R_24355001 RAL-307_100b 1758 chr2R 24430922 24430926 chr2R 24431031 24431039 6 112 0.0 30.0 15.0 0.4 117 chr2R 24430922 intergenic CG15873 -,Pgam5-2 - chr2R 24430980 intergenic CG15873 -,Pgam5-2 - chr2R 24431039 intergenic Pgam5-2 -,CG15873 - chr2R_6_24430001 chr2R_24430001 RAL-307_100b 1759 chr2R 24430927 24430948 chr2R 24431015 24431061 17 109 0.0 19.0 9.5 1.6 134 chr2R 24430927 intergenic CG15873 -,Pgam5-2 - chr2R 24430994 intergenic CG15873 -,Pgam5-2 - chr2R 24431061 intergenic Pgam5-2 -,CG15873 - chr2R_17_24430001 chr2R_24430001 RAL-307_100b 1760 chr2R 24483617 24483674 chr2R 24483722 24483754 51 92 14.0 6.5 10.2 4.6 137 chr2R 24483617 intron CG13579 + chr2R 24483686 intron CG13579 + chr2R 24483754 intron CG13579 + chr2R_51_24480001 chr2R_24480001 RAL-307_100b 1761 chr2R 24493068 24493119 chr2R 24493176 24493230 19 112 0.0 14.5 7.2 2.3 162 chr2R 24493068 intergenic CG13590 -,CG13589 - chr2R 24493149 intergenic CG13590 -,CG13589 - chr2R 24493230 intergenic CG13590 -,CG13589 - chr2R_19_24490001 chr2R_24490001 RAL-307_100b 1762 chr2R 24590090 24590103 chr2R 24590207 24590220 12 115 48.5 16.0 32.2 0.4 130 chr2R 24590090 intron pio + chr2R 24590155 intron pio + chr2R 24590220 intron pio + chr2R_12_24590001 chr2R_24590001 RAL-307_100b 1763 chr2R 24590104 24590133 chr2R 24590206 24590250 40 112 24.0 16.0 20.0 1.9 146 chr2R 24590104 intron pio + chr2R 24590177 intron pio + chr2R 24590250 intron pio + chr2R_40_24590001 chr2R_24590001 RAL-307_100b 1764 chr2R 24590134 24590145 chr2R 24590204 24590252 15 104 16.5 14.0 15.2 0.9 118 chr2R 24590134 intron pio + chr2R 24590193 intron pio + chr2R 24590252 intron pio + chr2R_15_24590001 chr2R_24590001 RAL-307_100b 1765 chr2R 24630698 24630762 chr2R 24630814 24630857 36 110 7.5 10.0 8.8 3.7 159 chr2R 24630698 intron CG13594 - chr2R 24630778 intron CG13594 - chr2R 24630857 intron CG13594 - chr2R_36_24630001 chr2R_24630001 RAL-307_100b 1766 chr2R 24647568 24647572 chr2R 24655150 24655154 412 5 7582 32.5 16.0 24.2 0.2 7586 chr2R 24647568 intergenic not near genes chr2R 24651361 intergenic not near genes chr2R 24655154 intergenic not near genes chr2R_5_24650001 chr2R_24650001 RAL-307_100b 1767 chr2R 24647576 24647616 chr2R 24655147 24655198 412 33 7578 13.5 13.0 13.2 2.3 7622 chr2R 24647576 intergenic not near genes chr2R 24651387 intergenic not near genes chr2R 24655198 intergenic not near genes chr2R_33_24650001 chr2R_24650001 RAL-307_100b 1768 chr2R 24688936 24688992 chr2R 24689044 24689070 47 101 13.0 11.0 12.0 3.6 134 chr2R 24688936 intergenic not near genes chr2R 24689003 intergenic not near genes chr2R 24689070 intergenic not near genes chr2R_47_24685001 chr2R_24685001 RAL-307_100b 1769 chr2R 24719800 24719808 chr2R 24719909 24719945 12 125 21.5 18.0 19.8 0.6 145 chr2R 24719800 intron Mid1 - chr2R 24719872 intron Mid1 - chr2R 24719945 intron Mid1 - chr2R_12_24715001 chr2R_24715001 RAL-307_100b 1770 chr2R 24719809 24719826 chr2R 24719906 24719963 24 129 11.5 15.5 13.5 1.7 154 chr2R 24719809 intron Mid1 - chr2R 24719886 intron Mid1 - chr2R 24719963 intron Mid1 - chr2R_24_24715001 chr2R_24715001 RAL-307_100b 1771 chr2R 24727860 24727887 chr2R 24735393 24735410 mdg1 22 7530 20.0 16.5 18.2 1.1 7550 chr2R 24727860 intron Mid1 - chr2R 24731635 intron Mid1 - chr2R 24735410 intron Mid1 - chr2R_22_24730001 chr2R_24730001 RAL-307_100b 1772 chr2R 24727888 24727917 chr2R 24735390 24735437 mdg1 47 7524 12.0 15.0 13.5 3.2 7549 chr2R 24727888 intron Mid1 - chr2R 24731662 intron Mid1 - chr2R 24735437 intron Mid1 - chr2R_47_24730001 chr2R_24730001 RAL-307_100b 1773 chr2R 24763591 24763600 chr2R 24765592 24765600 G2 10 2000 36.5 22.0 29.2 0.3 2009 chr2R 24763591 exon CG3894 + chr2R 24764596 intron CG3894 + chr2R 24765600 exon CG3894 + chr2R_10_24760001 chr2R_24760001 RAL-307_100b 1774 chr2R 24763606 24763644 chr2R 24765591 24765642 G2 52 1995 12.0 21.5 16.8 2.9 2036 chr2R 24763606 exon CG3894 + chr2R 24764624 intron CG3894 + chr2R 24765642 exon CG3894 + chr2R_52_24760001 chr2R_24760001 RAL-307_100b 1775 chr2R 24809802 24809858 chr2R 24809930 24809987 28 127 12.5 12.0 12.2 2.1 185 chr2R 24809802 3` UTR CG42851 + chr2R 24809894 3` UTR CG42851 + chr2R 24809987 3` UTR CG42851 + chr2R_28_24805001 chr2R_24805001 RAL-307_100b 1776 chr2R 24823796 24823804 chr2R 24823927 24823930 6 130 31.5 25.5 28.5 0.2 134 chr2R 24823796 intron Dll + chr2R 24823863 intron Dll + chr2R 24823930 intron Dll + chr2R_6_24820001 chr2R_24820001 RAL-307_100b 1777 chr2R 24823806 24823832 chr2R 24823918 24823963 40 125 19.0 19.5 19.2 2.0 157 chr2R 24823806 intron Dll + chr2R 24823884 intron Dll + chr2R 24823963 intron Dll + chr2R_40_24820001 chr2R_24820001 RAL-307_100b 1778 chr2R 24859814 24859869 chr2R 24859925 24859980 33 108 10.5 13.0 11.8 2.6 166 chr2R 24859814 5` UTR CR44829 + chr2R 24859897 5` UTR CR44829 + chr2R 24859980 5` UTR CR44829 + chr2R_33_24855001 chr2R_24855001 RAL-307_100b 1779 chr2R 24884026 24884044 chr2R 24884133 24884151 19 106 30.5 20.0 25.2 0.7 125 chr2R 24884026 intron NKAIN + chr2R 24884088 intron NKAIN + chr2R 24884151 intron NKAIN + chr2R_19_24880001 chr2R_24880001 RAL-307_100b 1780 chr2R 24884045 24884077 chr2R 24884132 24884184 34 103 14.0 20.0 17.0 1.9 139 chr2R 24884045 intron NKAIN + chr2R 24884114 intron NKAIN + chr2R 24884184 intron NKAIN + chr2R_34_24880001 chr2R_24880001 RAL-307_100b 1781 chr2R 22016065 22016066 chr2R 24975354 24975355 5 2959289 55.0 30.0 42.5 0.1 2959290 chr2R 22016065 intron CG34370 - chr2R 23495710 intergenic not near genes chr2R 24975355 intergenic CG2736 -,CR45252 + chr2R_5_23495001 chr2R_23495001 RAL-307_100b 1782 chr2R 24983975 24984034 chr2R 24984113 24984127 46 135 15.5 10.0 12.8 3.3 152 chr2R 24983975 intron emp - chr2R 24984051 intron emp - chr2R 24984127 intron emp - chr2R_46_24980001 chr2R_24980001 RAL-307_100b 1783 chr2R 25016814 25016818 chr2R 25016924 25016928 4 110 56.5 20.0 38.2 0.1 114 chr2R 25016814 intron uzip + chr2R 25016871 intron uzip + chr2R 25016928 intron uzip + chr2R_4_25015001 chr2R_25015001 RAL-307_100b 1784 chr2R 25016822 25016871 chr2R 25016922 25016981 57 104 22.5 19.5 21.0 2.6 159 chr2R 25016822 intron uzip + chr2R 25016902 intron uzip + chr2R 25016981 intron uzip + chr2R_57_25015001 chr2R_25015001 RAL-307_100b 1785 chr2R 25022614 25022673 chr2R 25022723 25022782 63 107 13.0 14.5 13.8 4.3 168 chr2R 25022614 intron uzip + chr2R 25022698 intron uzip + chr2R 25022782 intron uzip + chr2R_63_25020001 chr2R_25020001 RAL-307_100b 1786 chr2R 25061312 25061327 chr2R 25061419 25061435 11 108 45.5 15.5 30.5 0.3 123 chr2R 25061312 intergenic not near genes chr2R 25061374 intergenic not near genes chr2R 25061435 intergenic not near genes chr2R_11_25060001 chr2R_25060001 RAL-307_100b 1787 chr2R 25061329 25061369 chr2R 25061416 25061457 53 100 14.5 13.5 14.0 3.5 128 chr2R 25061329 intergenic not near genes chr2R 25061393 intergenic not near genes chr2R 25061457 intergenic not near genes chr2R_53_25060001 chr2R_25060001 RAL-307_100b 1788 chr2R 25076181 25076187 chr2R 25076495 25076501 5 314 61.5 28.5 45.0 0.1 320 chr2R 25076181 intron gol - chr2R 25076341 intron gol - chr2R 25076501 intron gol - chr2R_5_25075001 chr2R_25075001 RAL-307_100b 1789 chr2R 25081582 25081639 chr2R 25082703 25082760 62 1117 13.5 15.0 14.2 4.1 1178 chr2R 25081582 intron gol - chr2R 25082171 intron gol - chr2R 25082760 intron gol - chr2R_62_25080001 chr2R_25080001 RAL-307_100b 1790 chr2R 25101249 25101307 chr2R 25101376 25101434 60 123 14.5 18.0 16.2 3.5 185 chr2R 25101249 intron lov - chr2R 25101342 intron lov - chr2R 25101434 intron lov - chr2R_60_25100001 chr2R_25100001 RAL-307_100b 1791 chr2R 25141631 25141638 chr2R 25159346 25159353 roo 9 17715 33.0 13.5 23.2 0.4 17722 chr2R 25141631 intergenic not near genes chr2R 25150492 intergenic not near genes chr2R 25159353 intergenic not near genes chr2R_9_25150001 chr2R_25150001 RAL-307_100b 1792 chr2R 25141639 25141682 chr2R 25159343 25159397 roo 46 17711 12.0 13.0 12.5 3.4 17758 chr2R 25141639 intergenic not near genes chr2R 25150518 intergenic not near genes chr2R 25159397 intergenic not near genes chr2R_46_25150001 chr2R_25150001 RAL-307_100b 1793 chr2R 25234740 25234796 chr2R 25234845 25234901 55 104 9.0 11.5 10.2 4.9 161 chr2R 25234740 intron CG9380 - chr2R 25234820 intron CG9380 - chr2R 25234901 intron CG9380 - chr2R_55_25230001 chr2R_25230001 RAL-307_100b 1794 chr3L 30800 30821 chr3L 30986 31007 21 184 33.0 15.0 24.0 0.8 207 chr3L 30800 intergenic not near genes chr3L 30904 intergenic not near genes chr3L 31007 intergenic not near genes chr3L_21_30001 chr3L_30001 RAL-307_100b 1795 chr3L 30822 30858 chr3L 30985 31044 36 183 12.5 14.5 13.5 2.5 222 chr3L 30822 intergenic not near genes chr3L 30933 intergenic not near genes chr3L 31044 intergenic not near genes chr3L_36_30001 chr3L_30001 RAL-307_100b 1796 chr3L 68957 68959 chr3L 69069 69071 4 112 37.0 16.0 26.5 0.1 114 chr3L 68957 3` UTR Lsp1gamma + chr3L 69014 intergenic Lsp1gamma +,CR44510 + chr3L 69071 intergenic CR44510 +,Lsp1gamma + chr3L_4_65001 chr3L_65001 RAL-307_100b 1797 chr3L 68963 69015 chr3L 69067 69114 45 109 12.0 14.5 13.2 3.2 151 chr3L 68963 3` UTR Lsp1gamma + chr3L 69038 intergenic Lsp1gamma +,CR44510 + chr3L 69114 intergenic CR44510 +,Lsp1gamma + chr3L_45_65001 chr3L_65001 RAL-307_100b 1798 chr3L 93765 93819 chr3L 93871 93925 48 100 19.0 21.0 20.0 2.3 160 chr3L 93765 intergenic not near genes chr3L 93845 intergenic not near genes chr3L 93925 intergenic not near genes chr3L_48_90001 chr3L_90001 RAL-307_100b 1799 chr3L 105975 106028 chr3L 106129 106182 54 151 11.5 15.5 13.5 3.7 207 chr3L 105975 intergenic not near genes chr3L 106078 intergenic not near genes chr3L 106182 intergenic not near genes chr3L_54_105001 chr3L_105001 RAL-307_100b 1800 chr3L 108584 108626 chr3L 108752 108794 46 167 11.0 11.0 11.0 3.8 210 chr3L 108584 intergenic not near genes chr3L 108689 intergenic not near genes chr3L 108794 intergenic not near genes chr3L_46_105001 chr3L_105001 RAL-307_100b 1801 chr3L 110191 110199 chr3L 119383 119391 roo 5 9192 29.5 18.5 24.0 0.2 9200 chr3L 110191 intergenic not near genes chr3L 114791 intergenic not near genes chr3L 119391 intergenic not near genes chr3L_5_110001 chr3L_110001 RAL-307_100b 1802 chr3L 110203 110244 chr3L 119381 119436 roo 38 9187 14.0 17.0 15.5 2.3 9233 chr3L 110203 intergenic not near genes chr3L 114820 intergenic not near genes chr3L 119436 intergenic not near genes chr3L_38_110001 chr3L_110001 RAL-307_100b 1803 chr3L 343168 343177 chr3L 343316 343325 8 147 40.0 32.5 36.2 0.2 157 chr3L 343168 intron Ptpmeg + chr3L 343246 intron Ptpmeg + chr3L 343325 intron Ptpmeg + chr3L_8_340001 chr3L_340001 RAL-307_100b 1804 chr3L 402666 402669 chr3L 409744 409747 297 5 7078 51.0 22.0 36.5 0.1 7081 chr3L 402666 intergenic not near genes chr3L 406206 intergenic not near genes chr3L 409747 intergenic not near genes chr3L_5_405001 chr3L_405001 RAL-307_100b 1805 chr3L 402671 402718 chr3L 409740 409785 297 58 7073 20.0 18.0 19.0 2.9 7114 chr3L 402671 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409785 intergenic not near genes chr3L_58_405001 chr3L_405001 RAL-307_100b 1806 chr3L 456187 456238 chr3L 456291 456342 41 101 7.5 14.0 10.8 3.5 155 chr3L 456187 intron klar - chr3L 456264 intron klar - chr3L 456342 intron klar - chr3L_41_455001 chr3L_455001 RAL-307_100b 1807 chr3L 498489 498516 chr3L 498592 498619 22 102 12.5 7.5 10.0 2.0 130 chr3L 498489 intron klar - chr3L 498554 intron klar - chr3L 498619 intron klar - chr3L_22_495001 chr3L_495001 RAL-307_100b 1808 chr3L 563945 564002 chr3L 564149 564186 58 202 14.0 15.5 14.8 3.7 241 chr3L 563945 intron hipk + chr3L 564066 intron hipk + chr3L 564186 intron hipk + chr3L_58_560001 chr3L_560001 RAL-307_100b 1809 chr3L 642447 642499 chr3L 642563 642615 34 114 10.0 19.5 14.8 2.2 168 chr3L 642447 5` UTR CR43334 + chr3L 642531 5` UTR CR43334 + chr3L 642615 5` UTR CR43334 + chr3L_34_640001 chr3L_640001 RAL-307_100b 1810 chr3L 651363 651395 chr3L 651476 651508 29 111 37.5 19.0 28.2 1.0 145 chr3L 651363 intergenic Gale +,CG3402 - chr3L 651436 intergenic CG3402 -,Gale + chr3L 651508 intergenic CG3402 -,Gale + chr3L_29_650001 chr3L_650001 RAL-307_100b 1811 chr3L 651396 651422 chr3L 651474 651520 32 108 20.0 17.5 18.8 1.6 124 chr3L 651396 intergenic Gale +,CG3402 - chr3L 651458 intergenic CG3402 -,Gale + chr3L 651520 intergenic CG3402 -,Gale + chr3L_32_650001 chr3L_650001 RAL-307_100b 1812 chr3L 670040 670054 chr3L 670128 670145 6 90 19.0 14.5 16.8 0.3 105 chr3L 670040 intergenic not near genes chr3L 670092 intergenic not near genes chr3L 670145 intergenic not near genes chr3L_6_670001 chr3L_670001 RAL-307_100b 1813 chr3L 717911 717915 chr3L 717978 718029 5 97 0.0 11.5 5.8 0.7 118 chr3L 717911 intergenic not near genes chr3L 717970 intergenic not near genes chr3L 718029 intergenic not near genes chr3L_5_715001 chr3L_715001 RAL-307_100b 1814 chr3L 732797 732815 chr3L 733044 733062 12 246 28.5 16.5 22.5 0.5 265 chr3L 732797 intergenic not near genes chr3L 732930 intergenic not near genes chr3L 733062 intergenic not near genes chr3L_12_730001 chr3L_730001 RAL-307_100b 1815 chr3L 732816 732847 chr3L 733043 733094 31 238 14.5 15.5 15.0 1.9 278 chr3L 732816 intergenic not near genes chr3L 732955 intergenic not near genes chr3L 733094 intergenic not near genes chr3L_31_730001 chr3L_730001 RAL-307_100b 1816 chr3L 746469 746525 chr3L 746579 746635 54 107 16.0 19.0 17.5 2.9 166 chr3L 746469 intron hng3 - chr3L 746552 intron hng3 - chr3L 746635 intron hng3 - chr3L_54_745001 chr3L_745001 RAL-307_100b 1817 chr3L 789895 789904 chr3L 790405 790414 roo 7 510 27.5 15.5 21.5 0.3 519 chr3L 789895 intergenic not near genes chr3L 790154 intergenic not near genes chr3L 790414 intergenic not near genes chr3L_7_790001 chr3L_790001 RAL-307_100b 1818 chr3L 789907 789946 chr3L 790402 790415 roo 36 505 10.5 14.0 12.2 2.7 508 chr3L 789907 intergenic not near genes chr3L 790161 intergenic not near genes chr3L 790415 intergenic not near genes chr3L_36_790001 chr3L_790001 RAL-307_100b 1819 chr3L 824015 824040 chr3L 824122 824142 21 106 15.0 0.0 7.5 2.5 127 chr3L 824015 intergenic not near genes chr3L 824078 intergenic not near genes chr3L 824142 intergenic not near genes chr3L_21_820001 chr3L_820001 RAL-307_100b 1820 chr3L 857973 858032 chr3L 866479 866523 Tirant 52 8498 14.5 8.5 11.5 4.2 8550 chr3L 857973 intergenic not near genes chr3L 862248 intergenic not near genes chr3L 866523 5` UTR CG12502 + chr3L_52_860001 chr3L_860001 RAL-307_100b 1821 chr3L 899997 900014 chr3L 900101 900123 20 109 0.0 32.0 16.0 1.2 126 chr3L 899997 intergenic not near genes chr3L 900060 intergenic not near genes chr3L 900123 intergenic not near genes chr3L_20_900001 chr3L_900001 RAL-307_100b 1822 chr3L 901403 901454 chr3L 901505 901553 26 96 10.5 7.5 9.0 2.6 150 chr3L 901403 intergenic not near genes chr3L 901478 intergenic not near genes chr3L 901553 intergenic not near genes chr3L_26_900001 chr3L_900001 RAL-307_100b 1823 chr3L 905046 905092 chr3L 905155 905201 12 107 0.0 5.5 2.8 3.2 155 chr3L 905046 intergenic not near genes chr3L 905124 intergenic not near genes chr3L 905201 intergenic not near genes chr3L_12_905001 chr3L_905001 RAL-307_100b 1824 chr3L 922144 922185 chr3L 922246 922287 29 103 20.5 19.0 19.8 1.4 143 chr3L 922144 intron Glut1 + chr3L 922216 intron Glut1 + chr3L 922287 intron Glut1 + chr3L_29_920001 chr3L_920001 RAL-307_100b 1825 chr3L 925150 925210 chr3L 932601 932642 mdg1 52 7448 11.5 15.5 13.5 3.6 7492 chr3L 925150 intron Glut1 + chr3L 928896 intron Glut1 + chr3L 932642 intron Glut1 + chr3L_52_925001 chr3L_925001 RAL-307_100b 1826 chr3L 933883 933943 chr3L 934012 934071 55 124 11.0 16.5 13.8 3.7 188 chr3L 933883 intron Glut1 + chr3L 933977 intron Glut1 + chr3L 934071 intron Glut1 + chr3L_55_930001 chr3L_930001 RAL-307_100b 1827 chr3L 939751 939759 chr3L 940897 940905 jockey 10 1146 44.0 20.5 32.2 0.3 1154 chr3L 939751 intron Glut1 + chr3L 940328 intron Glut1 + chr3L 940905 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-307_100b 1828 chr3L 939760 939760 chr3L 940895 940906 jockey 4 1142 44.0 19.5 31.8 0.1 1146 chr3L 939760 intron Glut1 + chr3L 940333 intron Glut1 + chr3L 940906 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-307_100b 1829 chr3L 939762 939798 chr3L 940893 940936 jockey 41 1143 23.0 19.5 21.2 1.8 1174 chr3L 939762 intron Glut1 + chr3L 940349 intron Glut1 + chr3L 940936 intron Glut1 + chr3L_41_940001 chr3L_940001 RAL-307_100b 1830 chr3L 954836 954893 chr3L 955138 955195 38 297 21.5 12.5 17.0 2.1 359 chr3L 954836 intron Glut1 + chr3L 955016 intron Glut1 + chr3L 955195 intron Glut1 + chr3L_38_955001 chr3L_955001 RAL-307_100b 1831 chr3L 958288 958348 chr3L 958397 958457 54 105 15.0 13.5 14.2 3.6 169 chr3L 958288 intron Glut1 + chr3L 958372 intron Glut1 + chr3L 958457 intron Glut1 + chr3L_54_955001 chr3L_955001 RAL-307_100b 1832 chr3L 960992 961044 chr3L 961110 961162 39 117 9.0 18.0 13.5 2.7 170 chr3L 960992 intron Glut1 + chr3L 961077 intron Glut1 + chr3L 961162 intron Glut1 + chr3L_39_960001 chr3L_960001 RAL-307_100b 1833 chr3L 1010971 1011220 chr3L 1011077 1011322 51 103 37.0 10.5 23.8 2.1 351 chr3L 1010971 intron trio - chr3L 1011146 intron trio - chr3L 1011322 intron trio - chr3L_51_1010001 chr3L_1010001 RAL-307_100b 1834 chr3L 1015001 1015053 chr3L 1015138 1015188 55 132 16.5 15.0 15.8 3.3 187 chr3L 1015001 intron trio - chr3L 1015094 intron trio - chr3L 1015188 intron trio - chr3L_55_1015001 chr3L_1015001 RAL-307_100b 1835 chr3L 1031558 1031609 chr3L 1031652 1031680 44 90 22.5 13.5 18.0 2.3 122 chr3L 1031558 intron trio - chr3L 1031619 intron trio - chr3L 1031680 intron trio - chr3L_44_1030001 chr3L_1030001 RAL-307_100b 1836 chr3L 1040523 1040581 chr3L 1040632 1040690 54 108 16.0 16.0 16.0 3.2 167 chr3L 1040523 intron bab1 - chr3L 1040606 intron bab1 - chr3L 1040690 intron bab1 - chr3L_54_1040001 chr3L_1040001 RAL-307_100b 1837 chr3L 1047329 1047379 chr3L 1055166 1055216 412 18 7831 7.0 13.0 10.0 1.6 7887 chr3L 1047329 intron bab1 - chr3L 1051272 intron bab1 - chr3L 1055216 intron bab1 - chr3L_18_1050001 chr3L_1050001 RAL-307_100b 1838 chr3L 1047380 1047385 chr3L 1055162 1055217 412 22 7808 6.5 10.5 8.5 2.3 7837 chr3L 1047380 intron bab1 - chr3L 1051298 intron bab1 - chr3L 1055217 intron bab1 - chr3L_22_1050001 chr3L_1050001 RAL-307_100b 1839 chr3L 1109607 1109663 chr3L 1109720 1109776 50 111 19.5 13.5 16.5 2.9 169 chr3L 1109607 intergenic not near genes chr3L 1109692 intergenic not near genes chr3L 1109776 intergenic not near genes chr3L_50_1105001 chr3L_1105001 RAL-307_100b 1840 chr3L 1112216 1112270 chr3L 1112340 1112394 53 113 16.0 15.5 15.8 3.2 178 chr3L 1112216 intergenic not near genes chr3L 1112305 intergenic not near genes chr3L 1112394 intergenic not near genes chr3L_53_1110001 chr3L_1110001 RAL-307_100b 1841 chr3L 1145216 1145247 chr3L 1145320 1145351 29 101 21.0 0.0 10.5 2.5 135 chr3L 1145216 intron bab2 - chr3L 1145284 intron bab2 - chr3L 1145351 intron bab2 - chr3L_29_1145001 chr3L_1145001 RAL-307_100b 1842 chr3L 1154122 1154161 chr3L 1163281 1163326 roo 29 9171 11.5 12.5 12.0 2.2 9204 chr3L 1154122 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163326 intron bab2 - chr3L_29_1155001 chr3L_1155001 RAL-307_100b 1843 chr3L 1167647 1167704 chr3L 1167754 1167801 54 101 20.0 14.0 17.0 3.0 154 chr3L 1167647 intron bab2 - chr3L 1167724 intron bab2 - chr3L 1167801 intron bab2 - chr3L_54_1165001 chr3L_1165001 RAL-307_100b 1844 chr3L 1219569 1219621 chr3L 1227327 1227379 412 65 7749 13.5 23.0 18.2 3.4 7810 chr3L 1219569 intron mwh + chr3L 1223474 intron mwh + chr3L 1227379 intron mwh + chr3L_65_1220001 chr3L_1220001 RAL-307_100b 1845 chr3L 1251799 1251829 chr3L 1251905 1251930 9 101 0.0 1.0 0.5 6.0 131 chr3L 1251799 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251864 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251930 intergenic CG9130 +,CG9133 +,CG9129 + chr3L_9_1250001 chr3L_1250001 RAL-307_100b 1846 chr3L 1251832 1251839 chr3L 1251903 1251940 4 94 0.0 1.0 0.5 2.7 108 chr3L 1251832 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251886 intergenic CG9129 +,CG9130 +,CG9133 + chr3L 1251940 intergenic CG9130 +,CG9133 +,CG9129 + chr3L_4_1250001 chr3L_1250001 RAL-307_100b 1847 chr3L 1260129 1260163 chr3L 1260234 1260268 35 104 11.0 18.0 14.5 2.3 139 chr3L 1260129 intron CG9134 + chr3L 1260198 intron CG9134 + chr3L 1260268 intron CG9134 + chr3L_35_1260001 chr3L_1260001 RAL-307_100b 1848 chr3L 1289999 1290052 chr3L 1290130 1290143 47 125 11.0 24.0 17.5 2.5 144 chr3L 1289999 exon CG32333 + chr3L 1290071 intron CG32333 + chr3L 1290143 intron CG32333 + chr3L_47_1290001 chr3L_1290001 RAL-307_100b 1849 chr3L 1378916 1378955 chr3L 1379018 1379022 19 99 23.5 1.0 12.2 1.4 106 chr3L 1378916 intron,intron Ptp61F -,ru + chr3L 1378969 intron,intron Ptp61F -,ru + chr3L 1379022 intron,intron Ptp61F -,ru + chr3L_19_1375001 chr3L_1375001 RAL-307_100b 1850 chr3L 1396713 1396759 chr3L 1396822 1396864 19 104 36.0 32.0 34.0 0.5 151 chr3L 1396713 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396864 intron Ptp61F - chr3L_19_1395001 chr3L_1395001 RAL-307_100b 1851 chr3L 1424753 1424772 chr3L 1430014 1430029 Rt1a 16 5262 10.5 15.5 13.0 1.1 5276 chr3L 1424753 intron Ptp61F - chr3L 1427391 intron Ptp61F - chr3L 1430029 intron Ptp61F - chr3L_16_1425001 chr3L_1425001 RAL-307_100b 1852 chr3L 1485715 1485725 chr3L 1486911 1486921 1360 7 1196 29.0 38.0 33.5 0.2 1206 chr3L 1485715 intron stet - chr3L 1486318 intron stet - chr3L 1486921 intron stet - chr3L_7_1485001 chr3L_1485001 RAL-307_100b 1853 chr3L 1485727 1485742 chr3L 1486908 1486908 1360 15 1189 17.0 35.5 26.2 0.6 1181 chr3L 1485727 intron stet - chr3L 1486318 intron stet - chr3L 1486908 intron stet - chr3L_15_1485001 chr3L_1485001 RAL-307_100b 1854 chr3L 1505975 1506030 chr3L 1513597 1513652 17.6 59 7617 15.0 14.0 14.5 3.8 7677 chr3L 1505975 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513652 intron,intron Psa +,cue - chr3L_59_1505001 chr3L_1505001 RAL-307_100b 1855 chr3L 1571218 1571494 chr3L 1571323 1571605 64 106 8.0 8.5 8.2 7.0 387 chr3L 1571218 intron CG12004 + chr3L 1571412 intron CG12004 + chr3L 1571605 intron CG12004 + chr3L_64_1570001 chr3L_1570001 RAL-307_100b 1856 chr3L 1585912 1585936 chr3L 1586019 1586043 14 105 15.5 1.0 8.2 1.5 131 chr3L 1585912 intron CG13917 + chr3L 1585978 intron CG13917 + chr3L 1586043 intron CG13917 + chr3L_14_1585001 chr3L_1585001 RAL-307_100b 1857 chr3L 1632891 1632910 chr3L 1632985 1633011 12 98 11.0 26.0 18.5 0.6 120 chr3L 1632891 intron nSyb - chr3L 1632951 intron nSyb - chr3L 1633011 intron nSyb - chr3L_12_1630001 chr3L_1630001 RAL-307_100b 1858 chr3L 1632911 1632914 chr3L 1632981 1633015 14 84 10.0 22.5 16.2 0.8 104 chr3L 1632911 intron nSyb - chr3L 1632963 intron nSyb - chr3L 1633015 intron nSyb - chr3L_14_1630001 chr3L_1630001 RAL-307_100b 1859 chr3L 1740835 1740841 chr3L 1741101 1741109 pogo 4 268 37.0 21.0 29.0 0.1 274 chr3L 1740835 intron Gk + chr3L 1740972 intron Gk + chr3L 1741109 intron Gk + chr3L_4_1740001 chr3L_1740001 RAL-307_100b 1860 chr3L 1740842 1740870 chr3L 1741100 1741107 pogo 20 263 23.5 20.5 22.0 0.9 265 chr3L 1740842 intron Gk + chr3L 1740974 intron Gk + chr3L 1741107 intron Gk + chr3L_20_1740001 chr3L_1740001 RAL-307_100b 1861 chr3L 1740871 1740884 chr3L 1741097 1741117 pogo 9 258 16.5 18.5 17.5 0.5 246 chr3L 1740871 intron Gk + chr3L 1740994 intron Gk + chr3L 1741117 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-307_100b 1862 chr3L 1805672 1805710 chr3L 1805871 1805909 36 198 19.0 8.0 13.5 2.5 237 chr3L 1805672 exon CG42676 + chr3L 1805790 intron CG42676 + chr3L 1805909 intron CG42676 + chr3L_36_1805001 chr3L_1805001 RAL-307_100b 1863 chr3L 1817077 1817113 chr3L 1817181 1817217 20 100 6.5 10.5 8.5 2.1 140 chr3L 1817077 intron GV1 + chr3L 1817147 intron GV1 + chr3L 1817217 intron GV1 + chr3L_20_1815001 chr3L_1815001 RAL-307_100b 1864 chr3L 1821612 1821650 chr3L 1821719 1821757 33 106 14.0 10.5 12.2 2.5 145 chr3L 1821612 intron GV1 + chr3L 1821684 intron GV1 + chr3L 1821757 intron GV1 + chr3L_33_1820001 chr3L_1820001 RAL-307_100b 1865 chr3L 1848616 1848671 chr3L 1848719 1848765 39 101 10.0 18.5 14.2 2.6 149 chr3L 1848616 intergenic not near genes chr3L 1848690 intergenic not near genes chr3L 1848765 intergenic not near genes chr3L_39_1845001 chr3L_1845001 RAL-307_100b 1866 chr3L 1853020 1853055 chr3L 1853129 1853164 16 109 12.5 12.5 12.5 1.2 144 chr3L 1853020 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853164 intron CG13936 - chr3L_16_1850001 chr3L_1850001 RAL-307_100b 1867 chr3L 1905354 1905374 chr3L 1905473 1905493 8 118 10.5 28.0 19.2 0.4 139 chr3L 1905354 intron CG1887 - chr3L 1905424 intron CG1887 - chr3L 1905493 intron CG1887 - chr3L_8_1905001 chr3L_1905001 RAL-307_100b 1868 chr3L 1922433 1922452 chr3L 1922536 1922555 20 97 43.0 35.5 39.2 0.5 122 chr3L 1922433 intron Dbx + chr3L 1922494 intron Dbx + chr3L 1922555 intron Dbx + chr3L_20_1920001 chr3L_1920001 RAL-307_100b 1869 chr3L 1922453 1922473 chr3L 1922531 1922533 16 87 43.0 36.5 39.8 0.4 80 chr3L 1922453 intron Dbx + chr3L 1922493 intron Dbx + chr3L 1922533 intron Dbx + chr3L_16_1920001 chr3L_1920001 RAL-307_100b 1870 chr3L 1922982 1923039 chr3L 1923097 1923154 47 112 14.0 16.0 15.0 2.9 172 chr3L 1922982 intron Dbx + chr3L 1923068 intron Dbx + chr3L 1923154 intron Dbx + chr3L_47_1920001 chr3L_1920001 RAL-307_100b 1871 chr3L 1924937 1924976 chr3L 1925100 1925139 35 161 19.0 19.0 19.0 1.8 202 chr3L 1924937 exon Dbx + chr3L 1925038 intron Dbx + chr3L 1925139 intron Dbx + chr3L_35_1925001 chr3L_1925001 RAL-307_100b 1872 chr3L 1988815 1988830 chr3L 1989018 1989034 14 204 6.0 18.0 12.0 1.1 219 chr3L 1988815 intergenic not near genes chr3L 1988924 intergenic not near genes chr3L 1989034 intergenic not near genes chr3L_14_1985001 chr3L_1985001 RAL-307_100b 1873 chr3L 1988831 1988874 chr3L 1989017 1989054 44 200 4.0 17.5 10.8 3.7 223 chr3L 1988831 intergenic not near genes chr3L 1988942 intergenic not near genes chr3L 1989054 intergenic not near genes chr3L_44_1985001 chr3L_1985001 RAL-307_100b 1874 chr3L 1991092 1991153 chr3L 1991196 1991256 48 101 11.5 6.0 8.8 4.9 164 chr3L 1991092 intergenic not near genes chr3L 1991174 intergenic not near genes chr3L 1991256 intergenic not near genes chr3L_48_1990001 chr3L_1990001 RAL-307_100b 1875 chr3L 2015751 2015762 chr3L 2015854 2015854 6 101 22.0 0.0 11.0 0.5 103 chr3L 2015751 intergenic not near genes chr3L 2015802 intergenic not near genes chr3L 2015854 intergenic not near genes chr3L_6_2015001 chr3L_2015001 RAL-307_100b 1876 chr3L 2035242 2035265 chr3L 2035343 2035366 19 100 29.0 2.0 15.5 1.2 124 chr3L 2035242 intergenic not near genes chr3L 2035304 intergenic not near genes chr3L 2035366 intergenic not near genes chr3L_19_2035001 chr3L_2035001 RAL-307_100b 1877 chr3L 2035290 2035303 chr3L 2035341 2035409 11 101 10.0 2.5 6.2 1.5 119 chr3L 2035290 intergenic not near genes chr3L 2035350 intergenic not near genes chr3L 2035409 intergenic not near genes chr3L_11_2035001 chr3L_2035001 RAL-307_100b 1878 chr3L 2108085 2108105 chr3L 2108195 2108215 14 110 0.0 0.0 0.0 14.0 130 chr3L 2108085 intron sls - chr3L 2108150 intron sls - chr3L 2108215 intron sls - chr3L_14_2105001 chr3L_2105001 RAL-307_100b 1879 chr3L 2108229 2108282 chr3L 2113452 2113511 copia 19 5228 1.0 8.5 4.8 3.3 5282 chr3L 2108229 intron sls - chr3L 2110870 intron sls - chr3L 2113511 intron sls - chr3L_19_2110001 chr3L_2110001 RAL-307_100b 1880 chr3L 2139181 2139234 chr3L 2139287 2139329 49 101 16.0 14.5 15.2 3.0 148 chr3L 2139181 intron zormin - chr3L 2139255 intron zormin - chr3L 2139329 intron zormin - chr3L_49_2135001 chr3L_2135001 RAL-307_100b 1881 chr3L 2199784 2199820 chr3L 2199885 2199921 42 99 12.5 16.0 14.2 2.8 137 chr3L 2199784 intergenic not near genes chr3L 2199852 intergenic not near genes chr3L 2199921 intergenic not near genes chr3L_42_2195001 chr3L_2195001 RAL-307_100b 1882 chr3L 2218454 2218477 chr3L 2218552 2218578 25 98 31.0 23.5 27.2 0.9 124 chr3L 2218454 intergenic not near genes chr3L 2218516 intergenic not near genes chr3L 2218578 intergenic not near genes chr3L_25_2215001 chr3L_2215001 RAL-307_100b 1883 chr3L 2218478 2218493 chr3L 2218551 2218589 14 94 23.0 23.5 23.2 0.6 111 chr3L 2218478 intergenic not near genes chr3L 2218534 intergenic not near genes chr3L 2218589 intergenic not near genes chr3L_14_2215001 chr3L_2215001 RAL-307_100b 1884 chr3L 2218494 2218509 chr3L 2218550 2218575 17 89 22.5 24.0 23.2 0.7 81 chr3L 2218494 intergenic not near genes chr3L 2218534 intergenic not near genes chr3L 2218575 intergenic not near genes chr3L_17_2215001 chr3L_2215001 RAL-307_100b 1885 chr3L 2279010 2279069 chr3L 2279186 2279240 37 172 0.0 10.0 5.0 6.2 230 chr3L 2279010 intergenic not near genes chr3L 2279125 intergenic not near genes chr3L 2279240 intergenic not near genes chr3L_37_2275001 chr3L_2275001 RAL-307_100b 1886 chr3L 2293824 2293859 chr3L 2293927 2293939 20 100 21.5 7.0 14.2 1.3 115 chr3L 2293824 intron MsR2 + chr3L 2293882 intron MsR2 + chr3L 2293939 intron MsR2 + chr3L_20_2290001 chr3L_2290001 RAL-307_100b 1887 chr3L 2307977 2308031 chr3L 2308108 2308162 39 126 17.5 13.0 15.2 2.4 185 chr3L 2307977 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308162 intergenic not near genes chr3L_39_2305001 chr3L_2305001 RAL-307_100b 1888 chr3L 2317834 2317889 chr3L 2317943 2317999 33 107 16.5 15.0 15.8 2.0 165 chr3L 2317834 intergenic CR45427 - chr3L 2317916 intergenic CR45427 - chr3L 2317999 intergenic CR45427 - chr3L_33_2315001 chr3L_2315001 RAL-307_100b 1889 chr3L 2321138 2321145 chr3L 2321240 2321247 10 102 38.0 14.5 26.2 0.4 109 chr3L 2321138 intergenic not near genes chr3L 2321192 intergenic not near genes chr3L 2321247 intergenic not near genes chr3L_10_2320001 chr3L_2320001 RAL-307_100b 1890 chr3L 2321147 2321175 chr3L 2321237 2321277 25 101 22.5 13.5 18.0 1.3 130 chr3L 2321147 intergenic not near genes chr3L 2321212 intergenic not near genes chr3L 2321277 intergenic not near genes chr3L_25_2320001 chr3L_2320001 RAL-307_100b 1891 chr3L 2321176 2321191 chr3L 2321236 2321273 18 90 16.0 14.5 15.2 1.1 97 chr3L 2321176 intergenic not near genes chr3L 2321224 intergenic not near genes chr3L 2321273 intergenic not near genes chr3L_18_2320001 chr3L_2320001 RAL-307_100b 1892 chr3L 2332952 2333010 chr3L 2333247 2333305 69 290 12.0 15.5 13.8 4.7 353 chr3L 2332952 intron MsR1 + chr3L 2333128 intron MsR1 + chr3L 2333305 intron MsR1 + chr3L_69_2330001 chr3L_2330001 RAL-307_100b 1893 chr3L 2411310 2411344 chr3L 2411415 2411449 43 102 13.0 17.0 15.0 2.7 139 chr3L 2411310 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411449 intron CG45186 + chr3L_43_2410001 chr3L_2410001 RAL-307_100b 1894 chr3L 2416992 2417002 chr3L 2417110 2417120 16 118 25.5 10.5 18.0 0.8 128 chr3L 2416992 intron CG45186 + chr3L 2417056 intron CG45186 + chr3L 2417120 intron CG45186 + chr3L_16_2415001 chr3L_2415001 RAL-307_100b 1895 chr3L 2417003 2417049 chr3L 2417109 2417167 41 116 7.5 10.0 8.8 4.2 164 chr3L 2417003 intron CG45186 + chr3L 2417085 intron CG45186 + chr3L 2417167 intron CG45186 + chr3L_41_2415001 chr3L_2415001 RAL-307_100b 1896 chr3L 2426465 2426467 chr3L 2426564 2426576 4 106 16.0 21.5 18.8 0.2 111 chr3L 2426465 intron CG45186 + chr3L 2426520 intron CG45186 + chr3L 2426576 intron CG45186 + chr3L_4_2425001 chr3L_2425001 RAL-307_100b 1897 chr3L 2426470 2426487 chr3L 2426539 2426596 26 106 10.0 10.0 10.0 2.4 126 chr3L 2426470 intron CG45186 + chr3L 2426533 intron CG45186 + chr3L 2426596 intron CG45186 + chr3L_26_2425001 chr3L_2425001 RAL-307_100b 1898 chr3L 2447480 2447531 chr3L 2456661 2456712 roo 46 9174 19.5 20.0 19.8 2.2 9232 chr3L 2447480 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456712 intron CG45186 + chr3L_46_2450001 chr3L_2450001 RAL-307_100b 1899 chr3L 2447532 2447534 chr3L 2456658 2456715 roo 6 9160 19.0 16.5 17.8 0.3 9183 chr3L 2447532 intron CG45186 + chr3L 2452124 intron CG45186 + chr3L 2456715 intron CG45186 + chr3L_6_2450001 chr3L_2450001 RAL-307_100b 1900 chr3L 2467427 2467430 chr3L 2467549 2467552 4 122 30.0 0.0 15.0 0.2 125 chr3L 2467427 intron CG45186 + chr3L 2467490 intron CG45186 + chr3L 2467552 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-307_100b 1901 chr3L 2467432 2467476 chr3L 2467545 2467598 8 119 11.5 0.0 5.8 1.2 166 chr3L 2467432 intron CG45186 + chr3L 2467515 intron CG45186 + chr3L 2467598 intron CG45186 + chr3L_8_2465001 chr3L_2465001 RAL-307_100b 1902 chr3L 2483127 2483169 chr3L 2483230 2483273 12 102 9.5 15.0 12.2 0.9 146 chr3L 2483127 intron CG45186 + chr3L 2483200 intron CG45186 + chr3L 2483273 intron CG45186 + chr3L_12_2480001 chr3L_2480001 RAL-307_100b 1903 chr3L 2515400 2515417 chr3L 2515507 2515524 16 107 9.5 31.5 20.5 0.7 124 chr3L 2515400 intron Spn - chr3L 2515462 intron Spn - chr3L 2515524 intron Spn - chr3L_16_2515001 chr3L_2515001 RAL-307_100b 1904 chr3L 2533632 2533635 chr3L 2533739 2533742 4 107 41.5 38.0 39.8 0.1 110 chr3L 2533632 intron Spn - chr3L 2533687 intron Spn - chr3L 2533742 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-307_100b 1905 chr3L 2533640 2533647 chr3L 2533736 2533754 5 103 33.5 35.5 34.5 0.1 114 chr3L 2533640 intron Spn - chr3L 2533697 intron Spn - chr3L 2533754 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-307_100b 1906 chr3L 2533648 2533665 chr3L 2533730 2533738 11 93 23.0 29.5 26.2 0.4 90 chr3L 2533648 intron Spn - chr3L 2533693 intron Spn - chr3L 2533738 intron Spn - chr3L_11_2530001 chr3L_2530001 RAL-307_100b 1907 chr3L 2533667 2533679 chr3L 2533728 2533735 15 81 17.5 31.5 24.5 0.6 68 chr3L 2533667 intron Spn - chr3L 2533701 intron Spn - chr3L 2533735 intron Spn - chr3L_15_2530001 chr3L_2530001 RAL-307_100b 1908 chr3L 2546738 2546794 chr3L 2546852 2546908 12 113 7.0 0.0 3.5 2.7 170 chr3L 2546738 intron Spn - chr3L 2546823 intron Spn - chr3L 2546908 intron Spn - chr3L_12_2545001 chr3L_2545001 RAL-307_100b 1909 chr3L 2683918 2683976 chr3L 2684019 2684077 63 98 16.0 15.5 15.8 3.8 159 chr3L 2683918 intron Fife - chr3L 2683998 intron Fife - chr3L 2684077 intron Fife - chr3L_63_2680001 chr3L_2680001 RAL-307_100b 1910 chr3L 2692136 2692191 chr3L 2692238 2692294 44 99 13.5 17.0 15.2 2.7 158 chr3L 2692136 intron Fife - chr3L 2692215 intron Fife - chr3L 2692294 intron Fife - chr3L_44_2690001 chr3L_2690001 RAL-307_100b 1911 chr3L 2719510 2719560 chr3L 2719637 2719687 45 126 15.5 13.0 14.2 3.0 177 chr3L 2719510 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719687 3` UTR Mrtf - chr3L_45_2715001 chr3L_2715001 RAL-307_100b 1912 chr3L 2751432 2751470 chr3L 2755752 2755767 F-element 29 4319 23.0 19.5 21.2 1.3 4335 chr3L 2751432 intron Mrtf - chr3L 2753600 intron Mrtf - chr3L 2755767 intron Mrtf - chr3L_29_2750001 chr3L_2750001 RAL-307_100b 1913 chr3L 2795704 2795715 chr3L 2795852 2795863 7 148 18.0 14.5 16.2 0.4 159 chr3L 2795704 intron CG43444 - chr3L 2795784 intron CG43444 - chr3L 2795863 intron CG43444 - chr3L_7_2795001 chr3L_2795001 RAL-307_100b 1914 chr3L 2795716 2795748 chr3L 2795851 2795896 21 147 10.0 14.5 12.2 1.6 180 chr3L 2795716 intron CG43444 - chr3L 2795806 intron CG43444 - chr3L 2795896 intron CG43444 - chr3L_21_2795001 chr3L_2795001 RAL-307_100b 1915 chr3L 2835854 2835870 chr3L 2835959 2835974 13 103 31.5 31.0 31.2 0.4 120 chr3L 2835854 intron CG43444 - chr3L 2835914 intron CG43444 - chr3L 2835974 intron CG43444 - chr3L_13_2835001 chr3L_2835001 RAL-307_100b 1916 chr3L 2850125 2850133 chr3L 2850247 2850255 5 121 53.5 17.0 35.2 0.1 130 chr3L 2850125 intron CG43444 - chr3L 2850190 intron CG43444 - chr3L 2850255 intron CG43444 - chr3L_5_2850001 chr3L_2850001 RAL-307_100b 1917 chr3L 2850134 2850181 chr3L 2850246 2850278 28 117 13.0 14.5 13.8 1.9 144 chr3L 2850134 intron CG43444 - chr3L 2850206 intron CG43444 - chr3L 2850278 intron CG43444 - chr3L_28_2850001 chr3L_2850001 RAL-307_100b 1918 chr3L 2854584 2854597 chr3L 2854686 2854696 6 102 40.0 2.0 21.0 0.3 112 chr3L 2854584 intron CG43444 - chr3L 2854640 intron CG43444 - chr3L 2854696 intron CG43444 - chr3L_6_2850001 chr3L_2850001 RAL-307_100b 1919 chr3L 2854599 2854633 chr3L 2854680 2854713 37 87 19.0 3.5 11.2 3.0 114 chr3L 2854599 intron CG43444 - chr3L 2854656 intron CG43444 - chr3L 2854713 intron CG43444 - chr3L_37_2850001 chr3L_2850001 RAL-307_100b 1920 chr3L 2897381 2897428 chr3L 2897512 2897559 42 130 15.0 15.5 15.2 2.6 178 chr3L 2897381 5` UTR Shab + chr3L 2897470 intron Shab + chr3L 2897559 intron Shab + chr3L_42_2895001 chr3L_2895001 RAL-307_100b 1921 chr3L 2906213 2906243 chr3L 2906323 2906353 22 109 11.5 21.5 16.5 1.3 140 chr3L 2906213 intron Shab + chr3L 2906283 intron Shab + chr3L 2906353 intron Shab + chr3L_22_2905001 chr3L_2905001 RAL-307_100b 1922 chr3L 2927815 2927826 chr3L 2936117 2936128 Tirant 9 8302 29.0 12.0 20.5 0.4 8313 chr3L 2927815 intron Shab + chr3L 2931972 intron Shab + chr3L 2936128 intron Shab + chr3L_9_2930001 chr3L_2930001 RAL-307_100b 1923 chr3L 2927828 2927872 chr3L 2936115 2936174 Tirant 38 8298 11.0 11.5 11.2 3.1 8346 chr3L 2927828 intron Shab + chr3L 2932001 intron Shab + chr3L 2936174 intron Shab + chr3L_38_2930001 chr3L_2930001 RAL-307_100b 1924 chr3L 2966696 2966723 chr3L 2974146 2974173 mdg1 15 7450 21.0 10.0 15.5 0.9 7477 chr3L 2966696 intergenic not near genes chr3L 2970434 intergenic not near genes chr3L 2974173 intergenic not near genes chr3L_15_2970001 chr3L_2970001 RAL-307_100b 1925 chr3L 2980033 2980065 chr3L 2982792 2982825 28 2763 111.5 141.0 126.2 0.2 2792 chr3L 2980033 intergenic not near genes chr3L 2981429 exon CG2107 + chr3L 2982825 exon CG2107 + chr3L_28_2980001 chr3L_2980001 RAL-307_100b 1926 chr3L 2980032 2980051 chr3L 2982826 2982840 20 2766 105.0 115.5 110.2 0.2 2808 chr3L 2980032 intergenic not near genes chr3L 2981436 exon CG2107 + chr3L 2982840 exon CG2107 + chr3L_20_2980001 chr3L_2980001 RAL-307_100b 1927 chr3L 3027582 3027608 chr3L 3028608 3028634 16 1023 22.5 18.0 20.2 0.8 1052 chr3L 3027582 intergenic not near genes chr3L 3028108 intergenic not near genes chr3L 3028634 intergenic not near genes chr3L_16_3025001 chr3L_3025001 RAL-307_100b 1928 chr3L 3027609 3027632 chr3L 3028607 3028658 33 1021 11.0 18.0 14.5 2.1 1049 chr3L 3027609 intergenic not near genes chr3L 3028134 intergenic not near genes chr3L 3028658 intergenic not near genes chr3L_33_3025001 chr3L_3025001 RAL-307_100b 1929 chr3L 3028981 3029019 chr3L 3029092 3029130 16 110 11.5 0.0 5.8 2.4 149 chr3L 3028981 intergenic not near genes chr3L 3029056 intergenic not near genes chr3L 3029130 intergenic not near genes chr3L_16_3025001 chr3L_3025001 RAL-307_100b 1930 chr3L 3031559 3031597 chr3L 3031666 3031709 16 111 12.0 0.0 6.0 2.3 150 chr3L 3031559 intergenic not near genes chr3L 3031634 intergenic not near genes chr3L 3031709 intergenic not near genes chr3L_16_3030001 chr3L_3030001 RAL-307_100b 1931 chr3L 3040299 3040330 chr3L 3042113 3042139 S-element 19 1806 30.0 0.5 15.2 1.2 1840 chr3L 3040299 3` UTR CG2162 + chr3L 3041219 intergenic not near genes chr3L 3042139 intergenic Jafrac2 + chr3L_19_3040001 chr3L_3040001 RAL-307_100b 1932 chr3L 3051718 3051744 chr3L 3051985 3052011 pogo 29 266 25.0 8.5 16.8 1.6 293 chr3L 3051718 3` UTR CG32485 + chr3L 3051864 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_29_3050001 chr3L_3050001 RAL-307_100b 1933 chr3L 3061259 3061266 chr3L 3069867 3069874 Tirant 5 8607 36.0 14.0 25.0 0.2 8615 chr3L 3061259 intron CG32486 - chr3L 3065566 intron CG32486 - chr3L 3069874 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-307_100b 1934 chr3L 3061267 3061315 chr3L 3069865 3069923 Tirant 41 8601 11.0 13.5 12.2 3.1 8656 chr3L 3061267 intron CG32486 - chr3L 3065595 intron CG32486 - chr3L 3069923 intron CG32486 - chr3L_41_3065001 chr3L_3065001 RAL-307_100b 1935 chr3L 3140803 3140858 chr3L 3141361 3141416 47 557 6.5 10.5 8.5 4.9 613 chr3L 3140803 intron CG11537 - chr3L 3141110 intron CG11537 - chr3L 3141416 intron CG11537 - chr3L_47_3140001 chr3L_3140001 RAL-307_100b 1936 chr3L 3206105 3206158 chr3L 3209860 3209903 7 3747 91.0 75.5 83.2 0.1 3798 chr3L 3206105 intron,exon gry +,CG33160 - chr3L 3208004 intron,exon,3` UTR gry +,CG32269 -,CG32270 - chr3L 3209903 exon gry + chr3L_7_3205001 chr3L_3205001 RAL-307_100b 1937 chr3L 3269076 3269127 chr3L 3269192 3269243 22 116 4.5 11.5 8.0 2.4 167 chr3L 3269076 intergenic CG34265 + chr3L 3269160 intergenic CG34265 + chr3L 3269243 intergenic CG34265 + chr3L_22_3265001 chr3L_3265001 RAL-307_100b 1938 chr3L 3281413 3281432 chr3L 3281932 3281942 Doc 10 518 24.5 19.5 22.0 0.4 529 chr3L 3281413 intron CG12017 + chr3L 3281678 intron CG12017 + chr3L 3281942 intron CG12017 + chr3L_10_3280001 chr3L_3280001 RAL-307_100b 1939 chr3L 3281433 3281477 chr3L 3281931 3281962 Doc 20 510 5.0 19.5 12.2 1.5 529 chr3L 3281433 intron CG12017 + chr3L 3281698 intron CG12017 + chr3L 3281962 intron CG12017 + chr3L_20_3280001 chr3L_3280001 RAL-307_100b 1940 chr3L 3284412 3284468 chr3L 3284521 3284577 39 106 16.5 14.0 15.2 2.4 165 chr3L 3284412 intron CG12017 + chr3L 3284494 intron CG12017 + chr3L 3284577 intron CG12017 + chr3L_39_3280001 chr3L_3280001 RAL-307_100b 1941 chr3L 3306491 3306548 chr3L 3306604 3306661 45 113 10.0 11.5 10.8 3.8 170 chr3L 3306491 intron ZnT63C + chr3L 3306576 intron ZnT63C + chr3L 3306661 intron ZnT63C + chr3L_45_3305001 chr3L_3305001 RAL-307_100b 1942 chr3L 3314112 3314146 chr3L 3314271 3314305 78 156 64.0 38.5 51.2 1.5 193 chr3L 3314112 intergenic ZnT63C +,Drsl2 + chr3L 3314208 intergenic Drsl2 +,ZnT63C + chr3L 3314305 intergenic Drsl2 +,ZnT63C + chr3L_78_3310001 chr3L_3310001 RAL-307_100b 1943 chr3L 3314147 3314169 chr3L 3314269 3314327 61 146 39.5 36.5 38.0 1.6 180 chr3L 3314147 intergenic ZnT63C +,Drsl2 + chr3L 3314237 intergenic Drsl2 +,ZnT63C + chr3L 3314327 intergenic Drsl2 +,ZnT63C + chr3L_61_3310001 chr3L_3310001 RAL-307_100b 1944 chr3L 3312267 3312270 chr3L 3315523 3315526 5 3256 94.5 112.0 103.2 0.0 3259 chr3L 3312267 exon ZnT63C + chr3L 3313896 3` UTR ZnT63C + chr3L 3315526 intergenic Drsl4 +,Drsl3 + chr3L_5_3310001 chr3L_3310001 RAL-307_100b 1945 chr3L 3312265 3312297 chr3L 3315531 3315583 35 3269 102.0 107.0 104.5 0.3 3318 chr3L 3312265 exon ZnT63C + chr3L 3313924 3` UTR ZnT63C + chr3L 3315583 intergenic Drsl4 +,Drsl3 + chr3L_35_3310001 chr3L_3310001 RAL-307_100b 1946 chr3L 3315951 3316010 chr3L 3316077 3316135 22 124 12.5 7.5 10.0 2.0 184 chr3L 3315951 intergenic Drsl4 + chr3L 3316043 intergenic Drsl4 + chr3L 3316135 intergenic Drsl4 + chr3L_22_3315001 chr3L_3315001 RAL-307_100b 1947 chr3L 3470131 3470188 chr3L 3470232 3470289 32 100 2.0 14.5 8.2 3.5 158 chr3L 3470131 intron CG14971 - chr3L 3470210 intron CG14971 - chr3L 3470289 intron CG14971 - chr3L_32_3470001 chr3L_3470001 RAL-307_100b 1948 chr3L 3475048 3475112 chr3L 3475518 3475546 jockey 32 463 8.0 20.5 14.2 2.1 498 chr3L 3475048 intron CG42324 + chr3L 3475297 intron CG42324 + chr3L 3475546 intron CG42324 + chr3L_32_3475001 chr3L_3475001 RAL-307_100b 1949 chr3L 3484389 3484447 chr3L 3484490 3484549 52 101 12.5 11.5 12.0 4.0 160 chr3L 3484389 intron,intron CG42324 +,CG43074 - chr3L 3484469 intron,exon CG42324 +,CG43074 - chr3L 3484549 intron,intron CG42324 +,CG43074 - chr3L_52_3480001 chr3L_3480001 RAL-307_100b 1950 chr3L 3512341 3512346 chr3L 3512446 3512451 4 105 16.0 15.0 15.5 0.2 110 chr3L 3512341 exon ImpE2 - chr3L 3512396 exon ImpE2 - chr3L 3512451 exon ImpE2 - chr3L_4_3510001 chr3L_3510001 RAL-307_100b 1951 chr3L 3539932 3539990 chr3L 3540046 3540104 26 112 12.0 0.0 6.0 3.7 172 chr3L 3539932 intron Eip63E + chr3L 3540018 intron Eip63E + chr3L 3540104 intron Eip63E + chr3L_26_3540001 chr3L_3540001 RAL-307_100b 1952 chr3L 3573143 3573193 chr3L 3573251 3573291 40 107 14.0 15.5 14.8 2.5 148 chr3L 3573143 intron Eip63E + chr3L 3573217 intron Eip63E + chr3L 3573291 intron Eip63E + chr3L_40_3570001 chr3L_3570001 RAL-307_100b 1953 chr3L 3585590 3585609 chr3L 3585707 3585726 12 116 0.0 23.5 11.8 0.9 136 chr3L 3585590 intron Eip63E + chr3L 3585658 intron Eip63E + chr3L 3585726 intron Eip63E + chr3L_12_3585001 chr3L_3585001 RAL-307_100b 1954 chr3L 3585610 3585628 chr3L 3585703 3585745 19 114 0.0 20.5 10.2 1.7 135 chr3L 3585610 intron Eip63E + chr3L 3585678 intron Eip63E + chr3L 3585745 intron Eip63E + chr3L_19_3585001 chr3L_3585001 RAL-307_100b 1955 chr3L 3601272 3601327 chr3L 3606608 3606663 copia 47 5333 16.5 12.5 14.5 3.0 5391 chr3L 3601272 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606663 intron Eip63E + chr3L_47_3600001 chr3L_3600001 RAL-307_100b 1956 chr3L 3709436 3709461 chr3L 3709543 3709552 15 106 12.0 12.0 12.0 1.2 116 chr3L 3709436 intergenic CR45675 + chr3L 3709494 intergenic CR45675 + chr3L 3709552 intergenic not near genes chr3L_15_3705001 chr3L_3705001 RAL-307_100b 1957 chr3L 3763737 3763764 chr3L 3763838 3763858 20 101 15.5 0.5 8.0 2.2 121 chr3L 3763737 intron CG32264 - chr3L 3763798 intron CG32264 - chr3L 3763858 intron CG32264 - chr3L_20_3760001 chr3L_3760001 RAL-307_100b 1958 chr3L 3766713 3766753 chr3L 3766824 3766837 19 107 8.5 9.0 8.8 1.9 124 chr3L 3766713 intron CG32264 - chr3L 3766775 intron CG32264 - chr3L 3766837 intron CG32264 - chr3L_19_3765001 chr3L_3765001 RAL-307_100b 1959 chr3L 3768939 3768983 chr3L 3769065 3769109 29 124 13.0 17.5 15.2 1.8 170 chr3L 3768939 intron CG32264 - chr3L 3769024 intron CG32264 - chr3L 3769109 exon CG32264 - chr3L_29_3765001 chr3L_3765001 RAL-307_100b 1960 chr3L 3783246 3783290 chr3L 3783348 3783391 7 92 9.5 0.0 4.8 1.2 145 chr3L 3783246 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783391 intron CG32264 - chr3L_7_3780001 chr3L_3780001 RAL-307_100b 1961 chr3L 3795568 3795626 chr3L 3795670 3795728 38 101 16.0 19.5 17.8 2.0 160 chr3L 3795568 intron CG32264 - chr3L 3795648 intron CG32264 - chr3L 3795728 intron CG32264 - chr3L_38_3795001 chr3L_3795001 RAL-307_100b 1962 chr3L 3797221 3797266 chr3L 3797329 3797374 38 106 6.5 13.5 10.0 3.5 153 chr3L 3797221 intron CG32264 - chr3L 3797298 intron CG32264 - chr3L 3797374 intron CG32264 - chr3L_38_3795001 chr3L_3795001 RAL-307_100b 1963 chr3L 3833717 3833769 chr3L 3833978 3834035 pogo 28 264 7.0 4.5 5.8 4.1 318 chr3L 3833717 intron enc + chr3L 3833876 intron enc + chr3L 3834035 intron enc + chr3L_28_3830001 chr3L_3830001 RAL-307_100b 1964 chr3L 3876592 3876630 chr3L 3876733 3876741 38 138 17.0 25.5 21.2 1.7 149 chr3L 3876592 intergenic not near genes chr3L 3876666 intergenic not near genes chr3L 3876741 intergenic not near genes chr3L_38_3875001 chr3L_3875001 RAL-307_100b 1965 chr3L 3877424 3877445 chr3L 3877577 3877598 18 152 7.0 14.5 10.8 1.5 174 chr3L 3877424 intergenic not near genes chr3L 3877511 intergenic not near genes chr3L 3877598 intergenic not near genes chr3L_18_3875001 chr3L_3875001 RAL-307_100b 1966 chr3L 3890942 3890989 chr3L 3891042 3891080 36 102 11.5 0.5 6.0 5.1 138 chr3L 3890942 intergenic not near genes chr3L 3891011 intergenic not near genes chr3L 3891080 intergenic not near genes chr3L_36_3890001 chr3L_3890001 RAL-307_100b 1967 chr3L 3912772 3912810 chr3L 3912889 3912927 21 116 12.0 7.0 9.5 2.0 155 chr3L 3912772 intron Eip63F-1 - chr3L 3912850 intron Eip63F-1 - chr3L 3912927 intron Eip63F-1 - chr3L_21_3910001 chr3L_3910001 RAL-307_100b 1968 chr3L 3914998 3915054 chr3L 3915100 3915156 41 101 7.5 14.5 11.0 3.4 158 chr3L 3914998 intron Eip63F-1 - chr3L 3915077 intron Eip63F-1 - chr3L 3915156 intron Eip63F-1 - chr3L_41_3915001 chr3L_3915001 RAL-307_100b 1969 chr3L 3926003 3926037 chr3L 3926121 3926155 27 117 14.0 0.5 7.2 3.3 152 chr3L 3926003 intron Eip63F-1 - chr3L 3926079 intron Eip63F-1 - chr3L 3926155 intron Eip63F-1 - chr3L_27_3925001 chr3L_3925001 RAL-307_100b 1970 chr3L 3946165 3946223 chr3L 3946267 3946325 42 97 15.0 14.5 14.8 2.7 160 chr3L 3946165 3` UTR CG14982 + chr3L 3946245 3` UTR CG14982 + chr3L 3946325 3` UTR CG14982 + chr3L_42_3945001 chr3L_3945001 RAL-307_100b 1971 chr3L 4038013 4038023 chr3L 4038120 4038130 7 107 24.5 13.0 18.8 0.4 117 chr3L 4038013 3` UTR CG11593 - chr3L 4038072 3` UTR CG11593 - chr3L 4038130 3` UTR CG11593 - chr3L_7_4035001 chr3L_4035001 RAL-307_100b 1972 chr3L 4038025 4038068 chr3L 4038112 4038159 41 102 16.0 9.5 12.8 3.0 134 chr3L 4038025 3` UTR CG11593 - chr3L 4038092 3` UTR CG11593 - chr3L 4038159 3` UTR CG11593 - chr3L_41_4035001 chr3L_4035001 RAL-307_100b 1973 chr3L 4092709 4092755 chr3L 4092878 4092924 24 163 12.5 12.5 12.5 1.8 215 chr3L 4092709 intergenic CG14989 +,CG14990 + chr3L 4092816 intergenic CG14989 +,CG14990 + chr3L 4092924 intergenic CG14989 +,CG14990 + chr3L_24_4090001 chr3L_4090001 RAL-307_100b 1974 chr3L 4146801 4146813 chr3L 4146908 4146920 16 107 0.0 25.5 12.8 1.2 119 chr3L 4146801 intergenic not near genes chr3L 4146860 intergenic not near genes chr3L 4146920 intergenic not near genes chr3L_16_4145001 chr3L_4145001 RAL-307_100b 1975 chr3L 4146814 4146841 chr3L 4146906 4146948 17 104 0.5 24.0 12.2 1.3 134 chr3L 4146814 intergenic not near genes chr3L 4146881 intergenic not near genes chr3L 4146948 intergenic not near genes chr3L_17_4145001 chr3L_4145001 RAL-307_100b 1976 chr3L 4233068 4233122 chr3L 4233181 4233235 23 112 0.0 13.0 6.5 3.1 167 chr3L 4233068 intron ImpL2 - chr3L 4233152 intron ImpL2 - chr3L 4233235 intron ImpL2 - chr3L_23_4230001 chr3L_4230001 RAL-307_100b 1977 chr3L 4238730 4238773 chr3L 4238842 4238879 17 112 0.0 0.0 0.0 17.0 149 chr3L 4238730 intergenic not near genes chr3L 4238804 intergenic not near genes chr3L 4238879 intergenic not near genes chr3L_17_4235001 chr3L_4235001 RAL-307_100b 1978 chr3L 4311767 4311793 chr3L 4311895 4311921 19 128 27.5 10.0 18.8 1.0 154 chr3L 4311767 intergenic not near genes chr3L 4311844 intergenic not near genes chr3L 4311921 intergenic not near genes chr3L_19_4310001 chr3L_4310001 RAL-307_100b 1979 chr3L 4311795 4311821 chr3L 4311892 4311949 27 125 11.5 9.5 10.5 2.3 154 chr3L 4311795 intergenic not near genes chr3L 4311872 intergenic not near genes chr3L 4311949 intergenic not near genes chr3L_27_4310001 chr3L_4310001 RAL-307_100b 1980 chr3L 4320101 4320108 chr3L 4324823 4324830 10 4722 102.0 95.0 98.5 0.1 4729 chr3L 4320101 intron CG32250 + chr3L 4322466 intergenic Cip4 -,CG15014 - chr3L 4324830 intron Cip4 - chr3L_10_4320001 chr3L_4320001 RAL-307_100b 1981 chr3L 4320099 4320136 chr3L 4324832 4324858 19 4723 115.5 86.5 101.0 0.2 4759 chr3L 4320099 intron CG32250 + chr3L 4322478 intergenic Cip4 -,CG15014 - chr3L 4324858 intron Cip4 - chr3L_19_4320001 chr3L_4320001 RAL-307_100b 1982 chr3L 4320097 4320146 chr3L 4324860 4324868 14 4734 120.0 85.5 102.8 0.1 4771 chr3L 4320097 intron CG32250 + chr3L 4322482 intergenic Cip4 -,CG15014 - chr3L 4324868 intron Cip4 - chr3L_14_4320001 chr3L_4320001 RAL-307_100b 1983 chr3L 4328730 4328753 chr3L 4336248 4336276 412 22 7522 17.0 20.5 18.8 1.1 7546 chr3L 4328730 intron Cip4 - chr3L 4332503 intron Cip4 - chr3L 4336276 exon Cip4 - chr3L_22_4330001 chr3L_4330001 RAL-307_100b 1984 chr3L 4328755 4328761 chr3L 4336237 4336284 412 6 7509 12.5 17.0 14.8 0.4 7529 chr3L 4328755 intron Cip4 - chr3L 4332520 intron Cip4 - chr3L 4336284 exon Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-307_100b 1985 chr3L 4341331 4341333 chr3L 21448026 21448027 5 17106695 77.5 53.5 65.5 0.1 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-307_100b 1986 chr3L 4344863 4344881 chr3L 4344995 4345013 13 132 27.5 0.0 13.8 0.9 150 chr3L 4344863 intron Cip4 - chr3L 4344938 intron Cip4 - chr3L 4345013 intron Cip4 - chr3L_13_4340001 chr3L_4340001 RAL-307_100b 1987 chr3L 4390025 4390036 chr3L 4390116 4390148 4 107 13.0 11.0 12.0 0.3 123 chr3L 4390025 intron slow + chr3L 4390086 intron slow + chr3L 4390148 intron slow + chr3L_4_4390001 chr3L_4390001 RAL-307_100b 1988 chr3L 4440729 4440765 chr3L 4440832 4440871 11 104 9.5 0.5 5.0 1.8 142 chr3L 4440729 intergenic not near genes chr3L 4440800 intergenic not near genes chr3L 4440871 intergenic not near genes chr3L_11_4440001 chr3L_4440001 RAL-307_100b 1989 chr3L 4494598 4494654 chr3L 4494751 4494785 53 150 15.0 0.0 7.5 6.2 187 chr3L 4494598 intron CR44709 - chr3L 4494692 3` UTR CR44709 - chr3L 4494785 3` UTR CR44709 - chr3L_53_4490001 chr3L_4490001 RAL-307_100b 1990 chr3L 4529210 4529223 chr3L 4529317 4529329 7 106 16.0 16.0 16.0 0.4 119 chr3L 4529210 intron Tie - chr3L 4529270 intron Tie - chr3L 4529329 intron Tie - chr3L_7_4525001 chr3L_4525001 RAL-307_100b 1991 chr3L 4604840 4604900 chr3L 4604976 4605021 50 131 11.5 11.5 11.5 4.0 181 chr3L 4604840 intron Src64B - chr3L 4604930 intron Src64B - chr3L 4605021 intron Src64B - chr3L_50_4600001 chr3L_4600001 RAL-307_100b 1992 chr3L 4652549 4652601 chr3L 4652655 4652710 40 106 8.5 13.5 11.0 3.3 161 chr3L 4652549 intron axo - chr3L 4652630 intron axo - chr3L 4652710 intron axo - chr3L_40_4650001 chr3L_4650001 RAL-307_100b 1993 chr3L 4657964 4658001 chr3L 4658438 4658488 44 484 0.5 23.0 11.8 3.4 524 chr3L 4657964 intron axo - chr3L 4658226 intron axo - chr3L 4658488 intron axo - chr3L_44_4655001 chr3L_4655001 RAL-307_100b 1994 chr3L 4676011 4676053 chr3L 4676117 4676159 22 105 11.0 10.0 10.5 1.9 148 chr3L 4676011 intron axo - chr3L 4676085 intron axo - chr3L 4676159 intron axo - chr3L_22_4675001 chr3L_4675001 RAL-307_100b 1995 chr3L 4748681 4748688 chr3L 4748797 4748803 5 116 40.0 19.0 29.5 0.2 122 chr3L 4748681 intron RhoGEF64C + chr3L 4748742 intron RhoGEF64C + chr3L 4748803 intron RhoGEF64C + chr3L_5_4745001 chr3L_4745001 RAL-307_100b 1996 chr3L 4748690 4748731 chr3L 4748796 4748847 36 111 16.5 18.5 17.5 1.9 157 chr3L 4748690 intron RhoGEF64C + chr3L 4748768 intron RhoGEF64C + chr3L 4748847 intron RhoGEF64C + chr3L_36_4745001 chr3L_4745001 RAL-307_100b 1997 chr3L 4767229 4767280 chr3L 4767335 4767386 15 110 51.5 42.0 46.8 0.3 157 chr3L 4767229 intron RhoGEF64C + chr3L 4767308 intron RhoGEF64C + chr3L 4767386 intron RhoGEF64C + chr3L_15_4765001 chr3L_4765001 RAL-307_100b 1998 chr3L 4782079 4782127 chr3L 4782204 4782233 40 121 15.0 16.5 15.8 2.4 154 chr3L 4782079 intron RhoGEF64C + chr3L 4782156 intron RhoGEF64C + chr3L 4782233 intron RhoGEF64C + chr3L_40_4780001 chr3L_4780001 RAL-307_100b 1999 chr3L 4797937 4797945 chr3L 4798042 4798050 7 105 3.0 13.5 8.2 0.8 113 chr3L 4797937 intergenic not near genes chr3L 4797994 intergenic not near genes chr3L 4798050 intergenic not near genes chr3L_7_4795001 chr3L_4795001 RAL-307_100b 2000 chr3L 4797946 4797991 chr3L 4798041 4798080 51 100 1.5 13.0 7.2 6.2 134 chr3L 4797946 intergenic not near genes chr3L 4798013 intergenic not near genes chr3L 4798080 intergenic not near genes chr3L_51_4795001 chr3L_4795001 RAL-307_100b 2001 chr3L 4837865 4837878 chr3L 4837969 4837982 15 102 33.5 14.0 23.8 0.6 117 chr3L 4837865 3` UTR CG13707 - chr3L 4837924 3` UTR CG13707 - chr3L 4837982 3` UTR CG13707 - chr3L_15_4835001 chr3L_4835001 RAL-307_100b 2002 chr3L 4837879 4837925 chr3L 4837967 4838007 51 100 13.0 14.0 13.5 3.5 128 chr3L 4837879 3` UTR CG13707 - chr3L 4837943 3` UTR CG13707 - chr3L 4838007 3` UTR CG13707 - chr3L_51_4835001 chr3L_4835001 RAL-307_100b 2003 chr3L 4839087 4839131 chr3L 4839210 4839260 12 119 9.5 0.0 4.8 2.1 173 chr3L 4839087 intron CG13707 - chr3L 4839174 intron CG13707 - chr3L 4839260 intron CG13707 - chr3L_12_4835001 chr3L_4835001 RAL-307_100b 2004 chr3L 4858283 4858289 chr3L 4858398 4858404 5 115 49.0 24.0 36.5 0.1 121 chr3L 4858283 intergenic not near genes chr3L 4858344 intergenic not near genes chr3L 4858404 intergenic not near genes chr3L_5_4855001 chr3L_4855001 RAL-307_100b 2005 chr3L 4858290 4858337 chr3L 4858396 4858422 41 108 15.0 22.5 18.8 2.1 132 chr3L 4858290 intergenic not near genes chr3L 4858356 intergenic not near genes chr3L 4858422 intergenic not near genes chr3L_41_4855001 chr3L_4855001 RAL-307_100b 2006 chr3L 4901103 4901161 chr3L 4907318 4907376 diver 36 6214 11.0 14.0 12.5 2.7 6273 chr3L 4901103 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907376 intergenic not near genes chr3L_36_4900001 chr3L_4900001 RAL-307_100b 2007 chr3L 4908882 4908933 chr3L 4909015 4909066 53 131 11.5 9.5 10.5 4.6 184 chr3L 4908882 intergenic not near genes chr3L 4908974 intergenic not near genes chr3L 4909066 intergenic not near genes chr3L_53_4905001 chr3L_4905001 RAL-307_100b 2008 chr3L 4989175 4989192 chr3L 4989285 4989307 7 114 0.0 1.5 0.8 3.9 132 chr3L 4989175 intron Con - chr3L 4989241 intron Con - chr3L 4989307 intron Con - chr3L_7_4985001 chr3L_4985001 RAL-307_100b 2009 chr3L 5034142 5034192 chr3L 5043309 5043344 roo 38 9174 10.5 10.0 10.2 3.4 9202 chr3L 5034142 intron Con - chr3L 5038743 intron Con - chr3L 5043344 intron Con - chr3L_38_5035001 chr3L_5035001 RAL-307_100b 2010 chr3L 5045439 5045478 chr3L 5050245 5050249 Doc 31 4805 14.5 13.5 14.0 2.1 4810 chr3L 5045439 intron Con - chr3L 5047844 intron Con - chr3L 5050249 intron Con - chr3L_31_5045001 chr3L_5045001 RAL-307_100b 2011 chr3L 5082340 5082393 chr3L 5082447 5082500 55 102 14.0 16.5 15.2 3.4 160 chr3L 5082340 intergenic not near genes chr3L 5082420 intergenic not near genes chr3L 5082500 intergenic not near genes chr3L_55_5080001 chr3L_5080001 RAL-307_100b 2012 chr3L 5104457 5104512 chr3L 5124616 5124669 36 20156 12.0 19.5 15.8 2.1 20212 chr3L 5104457 intergenic not near genes chr3L 5114563 intergenic not near genes chr3L 5124669 intergenic not near genes chr3L_36_5110001 chr3L_5110001 RAL-307_100b 2013 chr3L 5161877 5161880 chr3L 14159556 14159560 5 8997680 57.5 27.5 42.5 0.1 8997683 chr3L 5161877 intron shep - chr3L 9660718 exon fry - chr3L 14159560 intergenic not near genes chr3L_5_9660001 chr3L_9660001 RAL-307_100b 2014 chr3L 5195360 5195368 chr3L 5195757 5195774 9 403 23.0 12.5 17.8 0.5 414 chr3L 5195360 intron shep - chr3L 5195567 intron shep - chr3L 5195774 intron shep - chr3L_9_5195001 chr3L_5195001 RAL-307_100b 2015 chr3L 5195372 5195406 chr3L 5195752 5195810 20 399 10.5 10.0 10.2 1.8 438 chr3L 5195372 intron shep - chr3L 5195591 intron shep - chr3L 5195810 intron shep - chr3L_20_5195001 chr3L_5195001 RAL-307_100b 2016 chr3L 5223400 5223450 chr3L 5223501 5223557 27 98 15.5 12.0 13.8 1.8 157 chr3L 5223400 intron shep - chr3L 5223478 intron shep - chr3L 5223557 intron shep - chr3L_27_5220001 chr3L_5220001 RAL-307_100b 2017 chr3L 5251845 5251871 chr3L 5251949 5251975 26 103 6.0 15.0 10.5 2.3 130 chr3L 5251845 intron shep - chr3L 5251910 intron shep - chr3L 5251975 intron shep - chr3L_26_5250001 chr3L_5250001 RAL-307_100b 2018 chr3L 5261140 5261177 chr3L 5261244 5261281 15 102 22.5 19.5 21.0 0.7 141 chr3L 5261140 intron shep - chr3L 5261210 intron shep - chr3L 5261281 intron shep - chr3L_15_5260001 chr3L_5260001 RAL-307_100b 2019 chr3L 5292244 5292297 chr3L 5292355 5292408 30 110 7.5 4.0 5.8 4.4 164 chr3L 5292244 intergenic not near genes chr3L 5292326 intergenic not near genes chr3L 5292408 intergenic not near genes chr3L_30_5290001 chr3L_5290001 RAL-307_100b 2020 chr3L 5299129 5299184 chr3L 5306590 5306617 Quasimodo 27 7457 11.5 7.0 9.2 2.6 7488 chr3L 5299129 intergenic not near genes chr3L 5302873 intergenic not near genes chr3L 5306617 intergenic not near genes chr3L_27_5300001 chr3L_5300001 RAL-307_100b 2021 chr3L 5327441 5327478 chr3L 5327551 5327588 35 109 13.5 12.0 12.8 2.5 147 chr3L 5327441 intergenic not near genes chr3L 5327514 intergenic not near genes chr3L 5327588 intergenic not near genes chr3L_35_5325001 chr3L_5325001 RAL-307_100b 2022 chr3L 5351079 5351133 chr3L 5351189 5351243 52 108 14.0 12.0 13.0 3.7 164 chr3L 5351079 intron lama - chr3L 5351161 intron lama - chr3L 5351243 intron lama - chr3L_52_5350001 chr3L_5350001 RAL-307_100b 2023 chr3L 5396443 5396499 chr3L 5396554 5396611 11 110 0.0 0.5 0.2 9.2 168 chr3L 5396443 intergenic not near genes chr3L 5396527 intergenic not near genes chr3L 5396611 intergenic not near genes chr3L_11_5395001 chr3L_5395001 RAL-307_100b 2024 chr3L 5389063 5389085 chr3L 5447218 5447222 6 58138 48.0 63.0 55.5 0.1 58159 chr3L 5389063 intergenic not near genes chr3L 5418142 intergenic not near genes chr3L 5447222 intergenic not near genes chr3L_6_5415001 chr3L_5415001 RAL-307_100b 2025 chr3L 5458081 5458094 chr3L 5466662 5466721 Max-element 7 8620 11.5 19.5 15.5 0.4 8640 chr3L 5458081 intergenic not near genes chr3L 5462401 intergenic not near genes chr3L 5466721 intergenic not near genes chr3L_7_5460001 chr3L_5460001 RAL-307_100b 2026 chr3L 5504106 5504119 chr3L 5504207 5504226 19 103 11.5 12.5 12.0 1.5 120 chr3L 5504106 exon CG34342 - chr3L 5504166 intron CG34342 - chr3L 5504226 intron CG34342 - chr3L_19_5500001 chr3L_5500001 RAL-307_100b 2027 chr3L 5504534 5504569 chr3L 5504637 5504672 31 99 18.5 14.5 16.5 1.8 138 chr3L 5504534 intron CG34342 - chr3L 5504603 intron CG34342 - chr3L 5504672 intron CG34342 - chr3L_31_5500001 chr3L_5500001 RAL-307_100b 2028 chr3L 5516387 5516439 chr3L 5516502 5516559 28 117 10.0 14.5 12.2 2.1 172 chr3L 5516387 intron Lkr - chr3L 5516473 intron Lkr - chr3L 5516559 intron Lkr - chr3L_28_5515001 chr3L_5515001 RAL-307_100b 2029 chr3L 5531167 5531224 chr3L 5531273 5531330 38 102 8.0 8.0 8.0 4.2 163 chr3L 5531167 intergenic not near genes chr3L 5531248 intergenic not near genes chr3L 5531330 intergenic not near genes chr3L_38_5530001 chr3L_5530001 RAL-307_100b 2030 chr3L 5537696 5537756 chr3L 5538063 5538100 jockey 28 360 15.0 16.5 15.8 1.7 404 chr3L 5537696 intergenic not near genes chr3L 5537898 intergenic not near genes chr3L 5538100 intergenic CG10625 - chr3L_28_5535001 chr3L_5535001 RAL-307_100b 2031 chr3L 5597806 5597832 chr3L 5597911 5597937 18 105 10.5 3.0 6.8 2.3 131 chr3L 5597806 intergenic CG5150 + chr3L 5597872 intergenic CG5150 + chr3L 5597937 intergenic not near genes chr3L_18_5595001 chr3L_5595001 RAL-307_100b 2032 chr3L 5613468 5613501 chr3L 5613620 5613653 22 152 11.0 10.0 10.5 1.9 185 chr3L 5613468 intergenic not near genes chr3L 5613560 intergenic not near genes chr3L 5613653 intergenic not near genes chr3L_22_5610001 chr3L_5610001 RAL-307_100b 2033 chr3L 5654074 5654086 chr3L 5654187 5654188 5 110 25.0 0.0 12.5 0.4 114 chr3L 5654074 intergenic not near genes chr3L 5654131 intergenic not near genes chr3L 5654188 intergenic lin-28 + chr3L_5_5650001 chr3L_5650001 RAL-307_100b 2034 chr3L 5667602 5667654 chr3L 5667707 5667759 24 102 16.0 12.0 14.0 1.6 157 chr3L 5667602 intron sif + chr3L 5667680 intron sif + chr3L 5667759 intron sif + chr3L_24_5665001 chr3L_5665001 RAL-307_100b 2035 chr3L 5727159 5727200 chr3L 5727647 5727694 30 495 13.0 12.5 12.8 2.2 535 chr3L 5727159 intron sif + chr3L 5727426 intron sif + chr3L 5727694 intron sif + chr3L_30_5725001 chr3L_5725001 RAL-307_100b 2036 chr3L 5910006 5910063 chr3L 5910272 5910302 pogo 45 263 14.0 16.5 15.2 2.8 296 chr3L 5910006 intron CG13288 + chr3L 5910154 intron CG13288 + chr3L 5910302 intron CG13288 + chr3L_45_5910001 chr3L_5910001 RAL-307_100b 2037 chr3L 5926300 5926332 chr3L 5926511 5926547 BS 28 210 21.0 21.0 21.0 1.3 247 chr3L 5926300 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926547 intron Vap-33B + chr3L_28_5925001 chr3L_5925001 RAL-307_100b 2038 chr3L 5926334 5926350 chr3L 5926504 5926538 BS 16 207 14.0 15.5 14.8 1.0 204 chr3L 5926334 intron Vap-33B + chr3L 5926436 intron Vap-33B + chr3L 5926538 intron Vap-33B + chr3L_16_5925001 chr3L_5925001 RAL-307_100b 2039 chr3L 5992575 5992603 chr3L 5992701 5992730 29 125 30.5 17.0 23.8 1.2 155 chr3L 5992575 intergenic not near genes chr3L 5992652 intergenic not near genes chr3L 5992730 intergenic not near genes chr3L_29_5990001 chr3L_5990001 RAL-307_100b 2040 chr3L 5992604 5992620 chr3L 5992697 5992734 16 121 18.0 16.0 17.0 0.9 130 chr3L 5992604 intergenic not near genes chr3L 5992669 intergenic not near genes chr3L 5992734 intergenic not near genes chr3L_16_5990001 chr3L_5990001 RAL-307_100b 2041 chr3L 6001659 6001669 chr3L 6004384 6004394 jockey 10 2725 34.0 2.5 18.2 0.5 2735 chr3L 6001659 intron PVRAP + chr3L 6003026 intron PVRAP + chr3L 6004394 intron PVRAP + chr3L_10_6000001 chr3L_6000001 RAL-307_100b 2042 chr3L 6001670 6001717 chr3L 6004383 6004442 jockey 26 2723 13.0 2.5 7.8 3.0 2772 chr3L 6001670 intron PVRAP + chr3L 6003056 intron PVRAP + chr3L 6004442 intron PVRAP + chr3L_26_6000001 chr3L_6000001 RAL-307_100b 2043 chr3L 6040341 6040393 chr3L 6042722 6042774 Doc 39 2380 14.0 18.0 16.0 2.3 2433 chr3L 6040341 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042774 intergenic not near genes chr3L_39_6040001 chr3L_6040001 RAL-307_100b 2044 chr3L 6052634 6052644 chr3L 6052744 6052744 5 108 44.5 41.5 43.0 0.1 110 chr3L 6052634 exon Jon65Aii + chr3L 6052689 intron Jon65Aii + chr3L 6052744 exon Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-307_100b 2045 chr3L 6052647 6052665 chr3L 6052732 6052749 26 96 32.5 33.5 33.0 0.8 102 chr3L 6052647 exon Jon65Aii + chr3L 6052698 intron Jon65Aii + chr3L 6052749 exon Jon65Aii + chr3L_26_6050001 chr3L_6050001 RAL-307_100b 2046 chr3L 6077757 6077810 chr3L 6077862 6077915 24 104 11.0 0.0 5.5 3.7 158 chr3L 6077757 intron ssp6 + chr3L 6077836 intron ssp6 + chr3L 6077915 intron ssp6 + chr3L_24_6075001 chr3L_6075001 RAL-307_100b 2047 chr3L 6102926 6102963 chr3L 6103034 6103071 26 107 15.0 0.5 7.8 3.0 145 chr3L 6102926 intron Ets65A + chr3L 6102998 intron Ets65A + chr3L 6103071 intron Ets65A + chr3L_26_6100001 chr3L_6100001 RAL-307_100b 2048 chr3L 6116670 6116724 chr3L 6116779 6116833 46 107 15.0 19.5 17.2 2.5 163 chr3L 6116670 intron Ets65A + chr3L 6116752 intron Ets65A + chr3L 6116833 intron Ets65A + chr3L_46_6115001 chr3L_6115001 RAL-307_100b 2049 chr3L 6119116 6119162 chr3L 6119218 6119257 21 100 12.0 0.5 6.2 2.9 141 chr3L 6119116 exon Ets65A + chr3L 6119186 intron Ets65A + chr3L 6119257 intron Ets65A + chr3L_21_6115001 chr3L_6115001 RAL-307_100b 2050 chr3L 6142706 6142762 chr3L 6142989 6143045 42 281 9.0 11.5 10.2 3.8 339 chr3L 6142706 intergenic Cpr65Aw - chr3L 6142876 intergenic Cpr65Aw - chr3L 6143045 intergenic Lcp65Ad + chr3L_42_6140001 chr3L_6140001 RAL-307_100b 2051 chr3L 6155669 6155713 chr3L 6155780 6155815 38 110 15.0 14.0 14.5 2.5 146 chr3L 6155669 intergenic CR45421 - chr3L 6155742 intergenic not near genes chr3L 6155815 intergenic not near genes chr3L_38_6155001 chr3L_6155001 RAL-307_100b 2052 chr3L 6220889 6220902 chr3L 6230066 6230079 roo 9 9176 38.5 18.5 28.5 0.3 9190 chr3L 6220889 5` UTR pncr008:3L + chr3L 6225484 intergenic not near genes chr3L 6230079 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RAL-307_100b 2053 chr3L 6220903 6220944 chr3L 6230065 6230115 roo 51 9175 14.5 18.0 16.2 3.0 9212 chr3L 6220903 5` UTR pncr008:3L + chr3L 6225509 intergenic not near genes chr3L 6230115 intergenic not near genes chr3L_51_6225001 chr3L_6225001 RAL-307_100b 2054 chr3L 6315011 6315039 chr3L 6315109 6315125 5 96 8.0 0.5 4.2 1.0 114 chr3L 6315011 intergenic not near genes chr3L 6315068 intergenic not near genes chr3L 6315125 intergenic not near genes chr3L_5_6315001 chr3L_6315001 RAL-307_100b 2055 chr3L 6334983 6335038 chr3L 6335479 6335521 297 39 492 13.5 17.5 15.5 2.4 538 chr3L 6334983 intron CG13300 - chr3L 6335252 intron CG13300 - chr3L 6335521 intron CG13300 - chr3L_39_6335001 chr3L_6335001 RAL-307_100b 2056 chr3L 6353353 6353408 chr3L 6353458 6353513 55 92 14.0 16.0 15.0 3.4 160 chr3L 6353353 intergenic not near genes chr3L 6353433 intergenic not near genes chr3L 6353513 intergenic not near genes chr3L_55_6350001 chr3L_6350001 RAL-307_100b 2057 chr3L 6405632 6405687 chr3L 6432121 6432176 roo 42 26486 13.5 16.0 14.8 2.7 26544 chr3L 6405632 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432176 intron CG42747 + chr3L_42_6415001 chr3L_6415001 RAL-307_100b 2058 chr3L 6481960 6481967 chr3L 6482064 6482071 5 104 36.5 16.5 26.5 0.2 111 chr3L 6481960 intron CG42747 + chr3L 6482016 intron CG42747 + chr3L 6482071 intron CG42747 + chr3L_5_6480001 chr3L_6480001 RAL-307_100b 2059 chr3L 6481968 6481994 chr3L 6482060 6482088 17 102 23.5 17.0 20.2 0.8 120 chr3L 6481968 intron CG42747 + chr3L 6482028 intron CG42747 + chr3L 6482088 intron CG42747 + chr3L_17_6480001 chr3L_6480001 RAL-307_100b 2060 chr3L 6513345 6513377 chr3L 6513456 6513488 18 111 3.5 11.5 7.5 2.1 143 chr3L 6513345 intron sfl + chr3L 6513416 intron sfl + chr3L 6513488 intron sfl + chr3L_18_6510001 chr3L_6510001 RAL-307_100b 2061 chr3L 6582438 6582493 chr3L 6582564 6582620 34 125 11.0 14.5 12.8 2.5 182 chr3L 6582438 intron,intron CG18769 +,jv - chr3L 6582529 intron,intron CG18769 +,jv - chr3L 6582620 intron,intron CG18769 +,jv - chr3L_34_6580001 chr3L_6580001 RAL-307_100b 2062 chr3L 6620587 6620606 chr3L 6621052 6621055 Rt1c 22 463 14.5 41.0 27.8 0.8 468 chr3L 6620587 intergenic not near genes chr3L 6620821 intergenic not near genes chr3L 6621055 intergenic not near genes chr3L_22_6620001 chr3L_6620001 RAL-307_100b 2063 chr3L 6642847 6642874 chr3L 6642951 6642979 9 105 18.0 0.0 9.0 0.9 132 chr3L 6642847 intergenic CR45239 + chr3L 6642913 intergenic CR45239 + chr3L 6642979 intergenic CR45239 + chr3L_9_6640001 chr3L_6640001 RAL-307_100b 2064 chr3L 6778527 6778533 chr3L 6778645 6778651 5 118 0.0 16.0 8.0 0.6 124 chr3L 6778527 intergenic not near genes chr3L 6778589 intergenic not near genes chr3L 6778651 intergenic not near genes chr3L_5_6775001 chr3L_6775001 RAL-307_100b 2065 chr3L 6781099 6781148 chr3L 6783137 6783138 Doc 46 2035 15.0 16.0 15.5 2.8 2039 chr3L 6781099 intergenic not near genes chr3L 6782118 intergenic not near genes chr3L 6783138 intergenic not near genes chr3L_46_6780001 chr3L_6780001 RAL-307_100b 2066 chr3L 6820631 6820639 chr3L 6820739 6820741 4 106 7.5 22.0 14.8 0.3 110 chr3L 6820631 intergenic not near genes chr3L 6820686 intergenic not near genes chr3L 6820741 intergenic not near genes chr3L_4_6820001 chr3L_6820001 RAL-307_100b 2067 chr3L 6855906 6855955 chr3L 6860716 6860765 Doc 34 4807 11.0 13.0 12.0 2.6 4859 chr3L 6855906 intergenic not near genes chr3L 6858336 intergenic not near genes chr3L 6860765 intergenic not near genes chr3L_34_6855001 chr3L_6855001 RAL-307_100b 2068 chr3L 6887494 6887551 chr3L 6895009 6895040 roo 38 7513 15.5 14.0 14.8 2.4 7546 chr3L 6887494 intergenic not near genes chr3L 6891267 intergenic not near genes chr3L 6895040 intergenic not near genes chr3L_38_6890001 chr3L_6890001 RAL-307_100b 2069 chr3L 6908493 6908549 chr3L 6908596 6908637 45 100 8.5 8.0 8.2 4.9 144 chr3L 6908493 intergenic not near genes chr3L 6908565 intergenic not near genes chr3L 6908637 intergenic not near genes chr3L_45_6905001 chr3L_6905001 RAL-307_100b 2070 chr3L 6934323 6934361 chr3L 6934447 6934497 21 131 12.0 8.0 10.0 1.9 174 chr3L 6934323 exon CG14820 + chr3L 6934410 intron CG14820 + chr3L 6934497 exon CG14820 + chr3L_21_6930001 chr3L_6930001 RAL-307_100b 2071 chr3L 6974485 6974524 chr3L 6974591 6974638 32 124 11.0 16.5 13.8 2.2 153 chr3L 6974485 intron Galphai - chr3L 6974562 intron Galphai - chr3L 6974638 intron Galphai - chr3L_32_6970001 chr3L_6970001 RAL-307_100b 2072 chr3L 6981931 6981938 chr3L 6982105 6982107 8 177 0.0 13.0 6.5 1.1 176 chr3L 6981931 intergenic not near genes chr3L 6982019 intergenic not near genes chr3L 6982107 intergenic not near genes chr3L_8_6980001 chr3L_6980001 RAL-307_100b 2073 chr3L 6994891 6994902 chr3L 6995525 6995537 BS 10 634 2.0 10.0 6.0 1.4 646 chr3L 6994891 intergenic bin + chr3L 6995214 intergenic not near genes chr3L 6995537 intergenic not near genes chr3L_10_6995001 chr3L_6995001 RAL-307_100b 2074 chr3L 6994903 6994917 chr3L 6995523 6995536 BS 7 630 2.0 9.0 5.5 1.1 633 chr3L 6994903 intergenic bin + chr3L 6995220 intergenic not near genes chr3L 6995536 intergenic not near genes chr3L_7_6995001 chr3L_6995001 RAL-307_100b 2075 chr3L 7001964 7001966 chr3L 7002110 7002112 4 146 16.0 15.0 15.5 0.2 148 chr3L 7001964 intron Mp + chr3L 7002038 intron Mp + chr3L 7002112 intron Mp + chr3L_4_7000001 chr3L_7000001 RAL-307_100b 2076 chr3L 7001968 7001974 chr3L 7002109 7002120 6 144 12.0 14.5 13.2 0.4 152 chr3L 7001968 intron Mp + chr3L 7002044 intron Mp + chr3L 7002120 intron Mp + chr3L_6_7000001 chr3L_7000001 RAL-307_100b 2077 chr3L 7042180 7042239 chr3L 7042317 7042320 48 126 20.5 12.5 16.5 2.7 140 chr3L 7042180 intron Mp + chr3L 7042250 intron Mp + chr3L 7042320 intron Mp + chr3L_48_7040001 chr3L_7040001 RAL-307_100b 2078 chr3L 7061382 7061407 chr3L 7061493 7061518 22 109 17.5 18.0 17.8 1.2 136 chr3L 7061382 intron CG8641 - chr3L 7061450 intron CG8641 - chr3L 7061518 intron CG8641 - chr3L_22_7060001 chr3L_7060001 RAL-307_100b 2079 chr3L 7086816 7086831 chr3L 7086920 7086920 4 100 15.0 0.0 7.5 0.5 104 chr3L 7086816 intergenic Cpr65Ea - chr3L 7086868 intergenic Cpr65Ea - chr3L 7086920 intergenic Cpr65Ea - chr3L_4_7085001 chr3L_7085001 RAL-307_100b 2080 chr3L 7104587 7104591 chr3L 7104871 7104875 6 283 43.5 20.0 31.8 0.2 288 chr3L 7104587 intron form3 + chr3L 7104731 intron form3 + chr3L 7104875 intron form3 + chr3L_6_7100001 chr3L_7100001 RAL-307_100b 2081 chr3L 7104592 7104636 chr3L 7104870 7104919 60 280 19.5 20.0 19.8 2.9 327 chr3L 7104592 intron form3 + chr3L 7104756 intron form3 + chr3L 7104919 intron form3 + chr3L_60_7100001 chr3L_7100001 RAL-307_100b 2082 chr3L 7112562 7112610 chr3L 7112673 7112722 30 109 14.0 24.0 19.0 1.5 160 chr3L 7112562 intron form3 + chr3L 7112642 intron form3 + chr3L 7112722 intron form3 + chr3L_30_7110001 chr3L_7110001 RAL-307_100b 2083 chr3L 7129937 7129982 chr3L 7130151 7130199 BS 37 215 9.0 10.0 9.5 3.5 262 chr3L 7129937 intergenic CG15829 + chr3L 7130068 intergenic CG15829 + chr3L 7130199 intergenic not near genes chr3L_37_7130001 chr3L_7130001 RAL-307_100b 2084 chr3L 7150016 7150025 chr3L 7150120 7150129 11 104 0.5 29.0 14.8 0.7 113 chr3L 7150016 intron corn - chr3L 7150072 intron corn - chr3L 7150129 intron corn - chr3L_11_7150001 chr3L_7150001 RAL-307_100b 2085 chr3L 7150027 7150038 chr3L 7150116 7150142 12 98 0.5 26.5 13.5 0.8 115 chr3L 7150027 intron corn - chr3L 7150084 intron corn - chr3L 7150142 intron corn - chr3L_12_7150001 chr3L_7150001 RAL-307_100b 2086 chr3L 7150039 7150044 chr3L 7150107 7150148 7 99 0.5 24.5 12.5 0.5 109 chr3L 7150039 intron corn - chr3L 7150094 intron corn - chr3L 7150148 intron corn - chr3L_7_7150001 chr3L_7150001 RAL-307_100b 2087 chr3L 7187382 7187410 chr3L 7187489 7187517 21 107 0.0 0.0 0.0 21.0 135 chr3L 7187382 intron Dscam2 - chr3L 7187450 intron Dscam2 - chr3L 7187517 intron Dscam2 - chr3L_21_7185001 chr3L_7185001 RAL-307_100b 2088 chr3L 7187412 7187415 chr3L 7187481 7187521 4 97 0.0 0.0 0.0 4.0 109 chr3L 7187412 intron Dscam2 - chr3L 7187466 intron Dscam2 - chr3L 7187521 intron Dscam2 - chr3L_4_7185001 chr3L_7185001 RAL-307_100b 2089 chr3L 7196826 7196866 chr3L 7196927 7196967 39 99 10.5 10.0 10.2 3.5 141 chr3L 7196826 intergenic not near genes chr3L 7196896 intergenic not near genes chr3L 7196967 intergenic not near genes chr3L_39_7195001 chr3L_7195001 RAL-307_100b 2090 chr3L 7201716 7201742 chr3L 7201816 7201844 22 101 32.5 21.0 26.8 0.8 128 chr3L 7201716 intergenic not near genes chr3L 7201780 intergenic not near genes chr3L 7201844 intergenic not near genes chr3L_22_7200001 chr3L_7200001 RAL-307_100b 2091 chr3L 7201743 7201768 chr3L 7201810 7201871 11 91 17.5 22.0 19.8 0.5 128 chr3L 7201743 intergenic not near genes chr3L 7201807 intergenic not near genes chr3L 7201871 intergenic not near genes chr3L_11_7200001 chr3L_7200001 RAL-307_100b 2092 chr3L 5894119 5894141 chr3L 7212055 7212056 4 1317920 3.5 60.0 31.8 0.1 1317937 chr3L 5894119 intergenic not near genes chr3L 6553088 intron CG18769 + chr3L 7212056 intergenic not near genes chr3L_4_6550001 chr3L_6550001 RAL-307_100b 2093 chr3L 7216088 7216147 chr3L 7216191 7216193 36 97 21.5 16.0 18.8 1.8 105 chr3L 7216088 intergenic not near genes chr3L 7216140 intergenic not near genes chr3L 7216193 intergenic not near genes chr3L_36_7215001 chr3L_7215001 RAL-307_100b 2094 chr3L 7244911 7244920 chr3L 7245028 7245037 7 117 46.5 20.5 33.5 0.2 126 chr3L 7244911 exon mei-P22 + chr3L 7244974 exon mei-P22 + chr3L 7245037 exon mei-P22 + chr3L_7_7240001 chr3L_7240001 RAL-307_100b 2095 chr3L 7244922 7244934 chr3L 7245024 7245051 15 109 36.5 17.5 27.0 0.5 129 chr3L 7244922 exon mei-P22 + chr3L 7244986 exon mei-P22 + chr3L 7245051 exon mei-P22 + chr3L_15_7240001 chr3L_7240001 RAL-307_100b 2096 chr3L 7244935 7244965 chr3L 7245021 7245080 38 107 13.5 16.0 14.8 2.4 145 chr3L 7244935 exon mei-P22 + chr3L 7245008 exon mei-P22 + chr3L 7245080 exon mei-P22 + chr3L_38_7245001 chr3L_7245001 RAL-307_100b 2097 chr3L 7252462 7252465 chr3L 7252578 7252581 4 116 39.0 11.5 25.2 0.2 119 chr3L 7252462 5` UTR,intron CR43470 +,CG14830 - chr3L 7252522 5` UTR,intron CR43470 +,CG14830 - chr3L 7252581 5` UTR,intron CR43470 +,CG14830 - chr3L_4_7250001 chr3L_7250001 RAL-307_100b 2098 chr3L 7252466 7252509 chr3L 7252575 7252615 26 111 21.0 11.5 16.2 1.5 149 chr3L 7252466 5` UTR,intron CR43470 +,CG14830 - chr3L 7252540 5` UTR,intron CR43470 +,CG14830 - chr3L 7252615 intron CG14830 - chr3L_26_7250001 chr3L_7250001 RAL-307_100b 2099 chr3L 7288948 7288983 chr3L 22883635 22883635 5 15594676 9.5 62.0 35.8 0.1 15594687 chr3L 7288948 intron unc-13-4A - chr3L 15086292 intron cp309 - chr3L 22883635 intron slif + chr3L_5_15085001 chr3L_15085001 RAL-307_100b 2100 chr3L 7377292 7377346 chr3L 7380422 7380476 297 47 3128 14.0 17.5 15.8 2.8 3184 chr3L 7377292 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380476 intron SMSr - chr3L_47_7375001 chr3L_7375001 RAL-307_100b 2101 chr3L 7422860 7422866 chr3L 7422972 7422972 5 111 37.0 0.0 18.5 0.3 112 chr3L 7422860 intergenic not near genes chr3L 7422916 intergenic not near genes chr3L 7422972 intergenic not near genes chr3L_5_7420001 chr3L_7420001 RAL-307_100b 2102 chr3L 7436110 7436150 chr3L 7436213 7436253 22 99 21.0 20.5 20.8 1.0 143 chr3L 7436110 intron CG42458 + chr3L 7436182 intron CG42458 + chr3L 7436253 intron CG42458 + chr3L_22_7435001 chr3L_7435001 RAL-307_100b 2103 chr3L 7445343 7445370 chr3L 7445439 7445459 24 97 34.0 33.5 33.8 0.7 116 chr3L 7445343 5` UTR CG42458 + chr3L 7445401 5` UTR CG42458 + chr3L 7445459 5` UTR CG42458 + chr3L_24_7445001 chr3L_7445001 RAL-307_100b 2104 chr3L 7445371 7445393 chr3L 7445438 7445488 12 83 25.5 32.0 28.8 0.4 117 chr3L 7445371 5` UTR CG42458 + chr3L 7445430 5` UTR CG42458 + chr3L 7445488 exon CG42458 + chr3L_12_7445001 chr3L_7445001 RAL-307_100b 2105 chr3L 7498740 7498747 chr3L 7503542 7503549 F-element 6 4802 31.0 19.5 25.2 0.2 4809 chr3L 7498740 5` UTR CG8539 - chr3L 7501144 intergenic not near genes chr3L 7503549 intergenic not near genes chr3L_6_7500001 chr3L_7500001 RAL-307_100b 2106 chr3L 7498750 7498784 chr3L 7503537 7503586 F-element 30 4798 19.0 15.5 17.2 1.6 4836 chr3L 7498750 5` UTR CG8539 - chr3L 7501168 intergenic not near genes chr3L 7503586 intergenic not near genes chr3L_30_7500001 chr3L_7500001 RAL-307_100b 2107 chr3L 7505428 7505443 chr3L 7505530 7505530 13 101 7.5 20.0 13.8 0.9 102 chr3L 7505428 intergenic CG7548 - chr3L 7505479 intergenic CG7548 - chr3L 7505530 intergenic CG7548 - chr3L_13_7505001 chr3L_7505001 RAL-307_100b 2108 chr3L 7508653 7508706 chr3L 7508762 7508815 45 107 14.5 4.0 9.2 4.4 162 chr3L 7508653 intergenic not near genes chr3L 7508734 intergenic not near genes chr3L 7508815 intergenic not near genes chr3L_45_7505001 chr3L_7505001 RAL-307_100b 2109 chr3L 7524124 7524171 chr3L 7524246 7524293 29 120 10.5 8.5 9.5 2.8 169 chr3L 7524124 intron ltl + chr3L 7524208 intron ltl + chr3L 7524293 intron ltl + chr3L_29_7520001 chr3L_7520001 RAL-307_100b 2110 chr3L 7536978 7536994 chr3L 7537133 7537136 10 157 27.0 14.5 20.8 0.5 158 chr3L 7536978 exon lqf + chr3L 7537057 3` UTR lqf + chr3L 7537136 3` UTR lqf + chr3L_10_7535001 chr3L_7535001 RAL-307_100b 2111 chr3L 7536995 7537026 chr3L 7537131 7537180 42 154 12.0 14.0 13.0 3.0 185 chr3L 7536995 exon lqf + chr3L 7537088 3` UTR lqf + chr3L 7537180 3` UTR lqf + chr3L_42_7535001 chr3L_7535001 RAL-307_100b 2112 chr3L 7591124 7591182 chr3L 7591235 7591267 54 106 12.0 14.5 13.2 3.8 143 chr3L 7591124 intergenic CG7716 - chr3L 7591196 intergenic CG7716 - chr3L 7591267 intergenic CG7716 - chr3L_54_7590001 chr3L_7590001 RAL-307_100b 2113 chr3L 7695481 7695484 chr3L 16691066 16691069 5 8995585 54.5 31.5 43.0 0.1 8995588 chr3L 7695481 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 12193275 exon thoc6 - chr3L 16691069 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_5_12190001 chr3L_12190001 RAL-307_100b 2114 chr3L 7767535 7767554 chr3L 7767691 7767710 17 155 29.0 31.5 30.2 0.5 175 chr3L 7767535 intron,exon Clk -,CG32371 - chr3L 7767622 intron,exon Clk -,CG32371 - chr3L 7767710 intron,exon Clk -,CG32371 - chr3L_17_7765001 chr3L_7765001 RAL-307_100b 2115 chr3L 7793694 7793698 chr3L 7800771 7800775 297 6 7077 46.5 19.5 33.0 0.2 7081 chr3L 7793694 intron CG32369 - chr3L 7797234 intron CG32369 - chr3L 7800775 intron CG32369 - chr3L_6_7795001 chr3L_7795001 RAL-307_100b 2116 chr3L 7793699 7793739 chr3L 7800768 7800816 297 46 7076 21.5 18.5 20.0 2.2 7117 chr3L 7793699 intron CG32369 - chr3L 7797258 intron CG32369 - chr3L 7800816 intron CG32369 - chr3L_46_7795001 chr3L_7795001 RAL-307_100b 2117 chr3L 7869639 7869674 chr3L 7869744 7869749 15 98 22.5 4.0 13.2 1.1 110 chr3L 7869639 exon CG32365 + chr3L 7869694 exon CG32365 + chr3L 7869749 exon CG32365 + chr3L_15_7865001 chr3L_7865001 RAL-307_100b 2118 chr3L 7875003 7875062 chr3L 7876858 7876917 35 1854 49.5 71.0 60.2 0.6 1914 chr3L 7875003 intron CG32365 + chr3L 7875960 intron CG32365 + chr3L 7876917 intron CG32365 + chr3L_35_7875001 chr3L_7875001 RAL-307_100b 2119 chr3L 7883726 7883736 chr3L 7883908 7883918 10 182 12.5 0.0 6.2 1.4 192 chr3L 7883726 intron CG32365 + chr3L 7883822 intron CG32365 + chr3L 7883918 intron CG32365 + chr3L_10_7880001 chr3L_7880001 RAL-307_100b 2120 chr3L 7883737 7883778 chr3L 7883902 7883909 20 172 10.0 0.0 5.0 3.3 172 chr3L 7883737 intron CG32365 + chr3L 7883823 intron CG32365 + chr3L 7883909 intron CG32365 + chr3L_20_7880001 chr3L_7880001 RAL-307_100b 2121 chr3L 7886517 7886520 chr3L 7889060 7889063 Stalker4 4 2542 3.5 22.5 13.0 0.3 2546 chr3L 7886517 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889063 intron CG32365 + chr3L_4_7885001 chr3L_7885001 RAL-307_100b 2122 chr3L 7886532 7886546 chr3L 7889038 7889090 Stalker4 13 2534 1.5 12.5 7.0 1.6 2558 chr3L 7886532 intron CG32365 + chr3L 7887811 intron CG32365 + chr3L 7889090 intron CG32365 + chr3L_13_7885001 chr3L_7885001 RAL-307_100b 2123 chr3L 7916808 7916859 chr3L 7926004 7926055 roo 34 9195 16.0 16.5 16.2 2.0 9247 chr3L 7916808 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926055 3` UTR syd - chr3L_34_7920001 chr3L_7920001 RAL-307_100b 2124 chr3L 7939440 7939470 chr3L 7939541 7939577 34 106 18.5 18.5 18.5 1.7 137 chr3L 7939440 intergenic not near genes chr3L 7939508 intergenic not near genes chr3L 7939577 intergenic not near genes chr3L_34_7935001 chr3L_7935001 RAL-307_100b 2125 chr3L 7956468 7956477 chr3L 7956571 7956580 9 103 5.5 17.0 11.2 0.7 112 chr3L 7956468 intergenic not near genes chr3L 7956524 intergenic not near genes chr3L 7956580 intergenic not near genes chr3L_9_7955001 chr3L_7955001 RAL-307_100b 2126 chr3L 7985340 7985358 chr3L 7987693 7987711 NOF 9 2353 32.5 16.5 24.5 0.4 2371 chr3L 7985340 intron nmo + chr3L 7986526 intron nmo + chr3L 7987711 intron nmo + chr3L_9_7985001 chr3L_7985001 RAL-307_100b 2127 chr3L 7985360 7985398 chr3L 7987692 7987718 NOF 32 2348 18.5 15.0 16.8 1.8 2358 chr3L 7985360 intron nmo + chr3L 7986539 intron nmo + chr3L 7987718 intron nmo + chr3L_32_7985001 chr3L_7985001 RAL-307_100b 2128 chr3L 7999804 7999862 chr3L 7999912 7999970 50 104 8.0 15.0 11.5 4.0 166 chr3L 7999804 intron nmo + chr3L 7999887 intron nmo + chr3L 7999970 intron nmo + chr3L_50_7995001 chr3L_7995001 RAL-307_100b 2129 chr3L 8019729 8019731 chr3L 8024122 8024152 NOF 5 4422 8.5 12.5 10.5 0.4 4423 chr3L 8019729 intron nmo + chr3L 8021940 intron nmo + chr3L 8024152 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-307_100b 2130 chr3L 8019732 8019736 chr3L 8024111 8024144 NOF 9 4423 5.5 9.0 7.2 1.1 4412 chr3L 8019732 intron nmo + chr3L 8021938 intron nmo + chr3L 8024144 intron nmo + chr3L_9_8020001 chr3L_8020001 RAL-307_100b 2131 chr3L 8062829 8062860 chr3L 8062933 8062950 29 102 20.0 18.5 19.2 1.4 121 chr3L 8062829 intergenic not near genes chr3L 8062890 intergenic not near genes chr3L 8062950 intergenic not near genes chr3L_29_8060001 chr3L_8060001 RAL-307_100b 2132 chr3L 8081255 8081307 chr3L 8081383 8081435 20 127 8.5 9.0 8.8 2.0 180 chr3L 8081255 intron Ect4 + chr3L 8081345 intron Ect4 + chr3L 8081435 intron Ect4 + chr3L_20_8080001 chr3L_8080001 RAL-307_100b 2133 chr3L 8178503 8178510 chr3L 8178605 8178612 6 102 10.5 0.0 5.2 1.0 109 chr3L 8178503 intergenic Nmt -,mthl7 - chr3L 8178558 intergenic mthl7 -,Nmt - chr3L 8178612 intergenic mthl7 -,Nmt - chr3L_6_8175001 chr3L_8175001 RAL-307_100b 2134 chr3L 8203515 8203568 chr3L 8203617 8203637 55 90 13.5 14.0 13.8 3.7 122 chr3L 8203515 intergenic CG13679 + chr3L 8203576 intergenic CG13679 + chr3L 8203637 intergenic CG13679 + chr3L_55_8200001 chr3L_8200001 RAL-307_100b 2135 chr3L 8208102 8208109 chr3L 8208259 8208266 7 157 40.0 15.0 27.5 0.2 164 chr3L 8208102 intergenic not near genes chr3L 8208184 intergenic not near genes chr3L 8208266 intergenic not near genes chr3L_7_8205001 chr3L_8205001 RAL-307_100b 2136 chr3L 8208110 8208153 chr3L 8208257 8208305 47 153 17.0 13.5 15.2 2.9 195 chr3L 8208110 intergenic not near genes chr3L 8208208 intergenic not near genes chr3L 8208305 intergenic not near genes chr3L_47_8205001 chr3L_8205001 RAL-307_100b 2137 chr3L 8210776 8210808 chr3L 8210916 8210948 25 139 21.0 15.5 18.2 1.3 172 chr3L 8210776 intergenic CG32364 - chr3L 8210862 intergenic CG32364 - chr3L 8210948 intergenic CG32364 - chr3L_25_8210001 chr3L_8210001 RAL-307_100b 2138 chr3L 8226700 8226729 chr3L 8226824 8226853 9 124 7.0 0.0 3.5 2.0 153 chr3L 8226700 intergenic not near genes chr3L 8226776 intergenic not near genes chr3L 8226853 intergenic not near genes chr3L_9_8225001 chr3L_8225001 RAL-307_100b 2139 chr3L 8233567 8233590 chr3L 8238854 8238869 Rt1a 24 5285 15.5 37.5 26.5 0.9 5302 chr3L 8233567 intron CG7213 - chr3L 8236218 intron CG7213 - chr3L 8238869 intron,intron CG7213 -,Dscam4 + chr3L_24_8235001 chr3L_8235001 RAL-307_100b 2140 chr3L 8274815 8274825 chr3L 8274954 8274954 5 136 26.0 0.0 13.0 0.4 139 chr3L 8274815 intron Dscam4 + chr3L 8274884 intron Dscam4 + chr3L 8274954 intron Dscam4 + chr3L_5_8270001 chr3L_8270001 RAL-307_100b 2141 chr3L 8302004 8302056 chr3L 8304276 8304337 71 2292 130.0 135.5 132.8 0.5 2333 chr3L 8302004 exon CG13671 + chr3L 8303170 exon CG7194 - chr3L 8304337 exon Sbp2 + chr3L_71_8300001 chr3L_8300001 RAL-307_100b 2142 chr3L 8336884 8336893 chr3L 8336985 8336994 9 101 33.0 14.0 23.5 0.4 110 chr3L 8336884 intron Cpr66Cb + chr3L 8336939 intron Cpr66Cb + chr3L 8336994 intron Cpr66Cb + chr3L_9_8335001 chr3L_8335001 RAL-307_100b 2143 chr3L 8336894 8336931 chr3L 8336983 8337032 35 99 14.0 15.5 14.8 2.2 138 chr3L 8336894 intron Cpr66Cb + chr3L 8336963 intron Cpr66Cb + chr3L 8337032 intron Cpr66Cb + chr3L_35_8335001 chr3L_8335001 RAL-307_100b 2144 chr3L 8364496 8364535 chr3L 8364612 8364651 25 114 16.5 5.0 10.8 2.1 155 chr3L 8364496 intergenic not near genes chr3L 8364574 intergenic not near genes chr3L 8364651 intergenic not near genes chr3L_25_8360001 chr3L_8360001 RAL-307_100b 2145 chr3L 8371732 8371741 chr3L 8371824 8371840 11 107 0.0 23.5 11.8 0.9 108 chr3L 8371732 intergenic not near genes chr3L 8371786 intergenic not near genes chr3L 8371840 intergenic not near genes chr3L_11_8370001 chr3L_8370001 RAL-307_100b 2146 chr3L 8371742 8371759 chr3L 8371822 8371870 19 107 0.0 20.5 10.2 1.7 128 chr3L 8371742 intergenic not near genes chr3L 8371806 intergenic not near genes chr3L 8371870 intergenic not near genes chr3L_19_8370001 chr3L_8370001 RAL-307_100b 2147 chr3L 8395808 8395845 chr3L 8395929 8395936 24 112 30.0 16.0 23.0 1.0 128 chr3L 8395808 intergenic CG7120 + chr3L 8395872 intergenic CG7120 + chr3L 8395936 intergenic CG7120 + chr3L_24_8395001 chr3L_8395001 RAL-307_100b 2148 chr3L 8395846 8395867 chr3L 8395928 8395963 26 101 18.0 15.0 16.5 1.5 117 chr3L 8395846 intergenic CG7120 + chr3L 8395904 intergenic CG7120 + chr3L 8395963 intergenic CG7120 + chr3L_26_8395001 chr3L_8395001 RAL-307_100b 2149 chr3L 8442896 8442900 chr3L 8442997 8443001 5 101 0.0 17.0 8.5 0.5 105 chr3L 8442896 intergenic CG6983 - chr3L 8442948 intergenic CG6983 - chr3L 8443001 intergenic CG6983 - chr3L_5_8440001 chr3L_8440001 RAL-307_100b 2150 chr3L 8451364 8451415 chr3L 8451466 8451501 47 102 9.5 11.5 10.5 4.1 137 chr3L 8451364 intron Gug + chr3L 8451432 intron Gug + chr3L 8451501 intron Gug + chr3L_47_8450001 chr3L_8450001 RAL-307_100b 2151 chr3L 8481791 8481806 chr3L 8490954 8490982 roo 20 9174 15.5 22.5 19.0 1.0 9191 chr3L 8481791 intron CG43163 - chr3L 8486386 intron CG43163 - chr3L 8490982 intron CG43163 - chr3L_20_8485001 chr3L_8485001 RAL-307_100b 2152 chr3L 8498273 8498326 chr3L 8505765 8505803 blood 53 7490 14.0 20.0 17.0 2.9 7530 chr3L 8498273 intron CG43163 - chr3L 8502038 intron CG43163 - chr3L 8505803 intron CG43163 - chr3L_53_8500001 chr3L_8500001 RAL-307_100b 2153 chr3L 8558635 8558695 chr3L 8558751 8558801 37 113 8.5 10.5 9.5 3.5 166 chr3L 8558635 intron rhea + chr3L 8558718 intron rhea + chr3L 8558801 intron rhea + chr3L_37_8555001 chr3L_8555001 RAL-307_100b 2154 chr3L 8643548 8643607 chr3L 8643649 8643708 51 99 13.0 15.0 14.0 3.4 160 chr3L 8643548 3` UTR Cpr66D + chr3L 8643628 intergenic Cpr66D + chr3L 8643708 intergenic Cpr66D + chr3L_51_8640001 chr3L_8640001 RAL-307_100b 2155 chr3L 8791252 8791272 chr3L 8796697 8796705 I-element 20 5443 45.0 0.0 22.5 0.9 5453 chr3L 8791252 exon Fhos + chr3L 8793978 intron Fhos + chr3L 8796705 intron Fhos + chr3L_20_8790001 chr3L_8790001 RAL-307_100b 2156 chr3L 8791282 8791308 chr3L 8796692 8796752 I-element 13 5439 23.5 0.0 11.8 1.0 5470 chr3L 8791282 exon Fhos + chr3L 8794017 intron Fhos + chr3L 8796752 intron Fhos + chr3L_13_8790001 chr3L_8790001 RAL-307_100b 2157 chr3L 8839703 8839750 chr3L 8839808 8839855 41 101 15.5 8.5 12.0 3.2 152 chr3L 8839703 intron dally + chr3L 8839779 intron dally + chr3L 8839855 intron dally + chr3L_41_8835001 chr3L_8835001 RAL-307_100b 2158 chr3L 8849199 8849244 chr3L 8849293 8849354 27 102 9.5 13.5 11.5 2.2 155 chr3L 8849199 intron dally + chr3L 8849276 intron dally + chr3L 8849354 intron dally + chr3L_27_8845001 chr3L_8845001 RAL-307_100b 2159 chr3L 8959373 8959402 chr3L 8959559 8959587 34 184 7.5 9.5 8.5 3.6 214 chr3L 8959373 intron CG13313 + chr3L 8959480 intron CG13313 + chr3L 8959587 intron CG13313 + chr3L_34_8955001 chr3L_8955001 RAL-307_100b 2160 chr3L 9003923 9003928 chr3L 9004030 9004033 5 108 40.5 16.0 28.2 0.2 110 chr3L 9003923 intergenic not near genes chr3L 9003978 intergenic not near genes chr3L 9004033 intergenic not near genes chr3L_5_9000001 chr3L_9000001 RAL-307_100b 2161 chr3L 9003929 9003977 chr3L 9004029 9004073 48 105 18.0 16.0 17.0 2.7 144 chr3L 9003929 intergenic not near genes chr3L 9004001 intergenic not near genes chr3L 9004073 intergenic not near genes chr3L_48_9000001 chr3L_9000001 RAL-307_100b 2162 chr3L 9009935 9009978 chr3L 9010064 9010107 30 128 5.0 14.0 9.5 2.9 172 chr3L 9009935 intergenic CG5194 - chr3L 9010021 intergenic CG5194 - chr3L 9010107 intergenic CG5194 - chr3L_30_9010001 chr3L_9010001 RAL-307_100b 2163 chr3L 9030402 9030455 chr3L 9030506 9030544 25 102 14.5 5.5 10.0 2.3 142 chr3L 9030402 intergenic not near genes chr3L 9030473 intergenic not near genes chr3L 9030544 intergenic not near genes chr3L_25_9030001 chr3L_9030001 RAL-307_100b 2164 chr3L 9047067 9047095 chr3L 9047179 9047186 7 105 4.0 2.0 3.0 1.8 119 chr3L 9047067 intergenic CG5144 + chr3L 9047126 intergenic CG5144 + chr3L 9047186 intergenic CG5144 + chr3L_7_9045001 chr3L_9045001 RAL-307_100b 2165 chr3L 9076903 9076957 chr3L 9084488 9084502 412 45 7581 14.5 25.0 19.8 2.2 7599 chr3L 9076903 exon Tequila + chr3L 9080702 intron Tequila + chr3L 9084502 exon Tequila + chr3L_45_9080001 chr3L_9080001 RAL-307_100b 2166 chr3L 7750128 7750130 chr3L 9107465 9107469 4 1357338 54.5 0.0 27.2 0.1 1357341 chr3L 7750128 intron,3` UTR CG32373 +,CG13685 + chr3L 8428798 intron Cbl + chr3L 9107469 intron bol - chr3L_4_8425001 chr3L_8425001 RAL-307_100b 2167 chr3L 9109724 9109775 chr3L 9110354 9110405 48 628 20.0 15.0 17.5 2.6 681 chr3L 9109724 intron bol - chr3L 9110064 intron bol - chr3L 9110405 intron bol - chr3L_48_9110001 chr3L_9110001 RAL-307_100b 2168 chr3L 9130535 9130540 chr3L 9134318 9134321 412 5 3784 34.0 14.5 24.2 0.2 3786 chr3L 9130535 intergenic bol - chr3L 9132428 intergenic not near genes chr3L 9134321 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-307_100b 2169 chr3L 9130542 9130581 chr3L 9134317 9134362 412 38 3781 20.0 13.5 16.8 2.1 3820 chr3L 9130542 intergenic bol - chr3L 9132452 intergenic not near genes chr3L 9134362 intergenic Dhpr + chr3L_38_9130001 chr3L_9130001 RAL-307_100b 2170 chr3L 9143386 9143388 chr3L 9143522 9143532 4 142 0.0 23.0 11.5 0.3 146 chr3L 9143386 intron nwk + chr3L 9143459 intron nwk + chr3L 9143532 exon nwk + chr3L_4_9140001 chr3L_9140001 RAL-307_100b 2171 chr3L 9164673 9164680 chr3L 9166165 9166172 hobo 11 1491 57.5 9.5 33.5 0.3 1499 chr3L 9164673 intron Rdl - chr3L 9165422 intron Rdl - chr3L 9166172 intron Rdl - chr3L_11_9165001 chr3L_9165001 RAL-307_100b 2172 chr3L 9164682 9164707 chr3L 9166163 9166199 hobo 47 1488 41.0 9.0 25.0 1.8 1517 chr3L 9164682 intron Rdl - chr3L 9165440 intron Rdl - chr3L 9166199 intron Rdl - chr3L_47_9165001 chr3L_9165001 RAL-307_100b 2173 chr3L 9164708 9164725 chr3L 9166162 9166185 hobo 10 1470 31.5 8.5 20.0 0.5 1477 chr3L 9164708 intron Rdl - chr3L 9165446 intron Rdl - chr3L 9166185 intron Rdl - chr3L_10_9165001 chr3L_9165001 RAL-307_100b 2174 chr3L 9219224 9219266 chr3L 9219916 9219963 jockey 51 693 30.0 20.0 25.0 2.0 739 chr3L 9219224 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219963 intergenic not near genes chr3L_51_9215001 chr3L_9215001 RAL-307_100b 2175 chr3L 9219268 9219275 chr3L 9219911 9219929 jockey 4 668 22.5 16.0 19.2 0.2 661 chr3L 9219268 intergenic not near genes chr3L 9219598 intergenic not near genes chr3L 9219929 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-307_100b 2176 chr3L 9239672 9239726 chr3L 9239997 9240031 59 325 10.0 17.0 13.5 4.1 359 chr3L 9239672 intergenic not near genes chr3L 9239852 intergenic not near genes chr3L 9240031 intergenic not near genes chr3L_59_9235001 chr3L_9235001 RAL-307_100b 2177 chr3L 9241098 9241154 chr3L 9241203 9241259 40 104 10.0 13.0 11.5 3.2 161 chr3L 9241098 intergenic not near genes chr3L 9241178 intergenic not near genes chr3L 9241259 intergenic not near genes chr3L_40_9240001 chr3L_9240001 RAL-307_100b 2178 chr3L 9270591 9270651 chr3L 9278371 9278402 roo 19 7772 11.0 13.0 12.0 1.5 7811 chr3L 9270591 intron GluRIB + chr3L 9274496 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_19_9270001 chr3L_9270001 RAL-307_100b 2179 chr3L 9302450 9302483 chr3L 9302560 9302593 23 108 9.5 0.0 4.8 4.0 143 chr3L 9302450 intergenic not near genes chr3L 9302522 intergenic not near genes chr3L 9302593 intergenic not near genes chr3L_23_9300001 chr3L_9300001 RAL-307_100b 2180 chr3L 9307796 9307796 chr3L 22908066 22908066 13 13600270 65.5 78.0 71.8 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_13_16105001 chr3L_16105001 RAL-307_100b 2181 chr3L 9312701 9312732 chr3L 9312804 9312835 26 101 23.0 12.5 17.8 1.4 134 chr3L 9312701 intergenic not near genes chr3L 9312768 intergenic not near genes chr3L 9312835 intergenic not near genes chr3L_26_9310001 chr3L_9310001 RAL-307_100b 2182 chr3L 9313026 9313026 chr3L 11777678 11777678 5 2464652 17.5 84.5 51.0 0.1 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_10545001 chr3L_10545001 RAL-307_100b 2183 chr3L 9350022 9350044 chr3L 9350137 9350141 5 113 29.0 0.0 14.5 0.3 119 chr3L 9350022 exon PGRP-LF + chr3L 9350082 intron PGRP-LF + chr3L 9350141 intron PGRP-LF + chr3L_5_9350001 chr3L_9350001 RAL-307_100b 2184 chr3L 9359565 9359621 chr3L 9359681 9359722 64 112 14.5 19.0 16.8 3.6 157 chr3L 9359565 3` UTR CG32039 + chr3L 9359644 3` UTR CG32039 + chr3L 9359722 3` UTR CG32039 + chr3L_64_9355001 chr3L_9355001 RAL-307_100b 2185 chr3L 9392446 9392454 chr3L 9395291 9395297 Doc 6 2845 8.0 17.5 12.8 0.4 2851 chr3L 9392446 intron CG4080 - chr3L 9393872 intron CG4080 - chr3L 9395297 intron CG4080 - chr3L_6_9390001 chr3L_9390001 RAL-307_100b 2186 chr3L 9443492 9443518 chr3L 9445299 9445330 S-element 22 1811 18.5 15.0 16.8 1.2 1838 chr3L 9443492 intron CG33926 + chr3L 9444411 intron CG33926 + chr3L 9445330 intron CG33926 + chr3L_22_9440001 chr3L_9440001 RAL-307_100b 2187 chr3L 9443519 9443544 chr3L 9445298 9445356 S-element 25 1803 11.0 15.0 13.0 1.8 1837 chr3L 9443519 intron CG33926 + chr3L 9444438 intron CG33926 + chr3L 9445356 intron CG33926 + chr3L_25_9440001 chr3L_9440001 RAL-307_100b 2188 chr3L 9498181 9498233 chr3L 9498276 9498335 40 100 11.5 11.5 11.5 3.2 154 chr3L 9498181 intron path - chr3L 9498258 intron path - chr3L 9498335 intron path - chr3L_40_9495001 chr3L_9495001 RAL-307_100b 2189 chr3L 9501677 9501731 chr3L 9502188 9502242 roo 43 507 8.0 18.0 13.0 3.1 565 chr3L 9501677 intron path - chr3L 9501960 intron path - chr3L 9502242 intron path - chr3L_43_9500001 chr3L_9500001 RAL-307_100b 2190 chr3L 9503455 9503463 chr3L 9503569 9503577 10 114 16.5 32.5 24.5 0.4 122 chr3L 9503455 intron path - chr3L 9503516 intron path - chr3L 9503577 intron path - chr3L_10_9500001 chr3L_9500001 RAL-307_100b 2191 chr3L 9506695 9506702 chr3L 9506804 9506811 5 109 9.5 27.0 18.2 0.3 116 chr3L 9506695 intergenic CG3408 - chr3L 9506753 intergenic CG3408 - chr3L 9506811 intergenic CG3408 - chr3L_5_9505001 chr3L_9505001 RAL-307_100b 2192 chr3L 9513420 9513432 chr3L 9513532 9513544 13 111 19.5 15.0 17.2 0.7 124 chr3L 9513420 intergenic CG33702 - chr3L 9513482 intergenic CG33702 - chr3L 9513544 intergenic CG33702 - chr3L_13_9510001 chr3L_9510001 RAL-307_100b 2193 chr3L 9513433 9513449 chr3L 9513530 9513561 15 108 15.5 14.0 14.8 0.9 128 chr3L 9513433 intergenic CG33702 - chr3L 9513497 intergenic CG33702 - chr3L 9513561 intergenic CG33702 - chr3L_15_9510001 chr3L_9510001 RAL-307_100b 2194 chr3L 9513451 9513475 chr3L 9513528 9513587 17 108 10.0 13.0 11.5 1.4 136 chr3L 9513451 intergenic CG33702 - chr3L 9513519 intergenic CG33702 - chr3L 9513587 intergenic CG33702 - chr3L_17_9510001 chr3L_9510001 RAL-307_100b 2195 chr3L 9520095 9520148 chr3L 9520625 9520678 54 527 14.0 17.5 15.8 3.2 583 chr3L 9520095 intron CG33700 - chr3L 9520386 intron CG33700 - chr3L 9520678 intron CG33700 - chr3L_54_9520001 chr3L_9520001 RAL-307_100b 2196 chr3L 9526468 9526512 chr3L 9528173 9528212 Doc 26 1704 9.0 16.0 12.5 1.9 1744 chr3L 9526468 intergenic not near genes chr3L 9527340 intergenic not near genes chr3L 9528212 intergenic not near genes chr3L_26_9525001 chr3L_9525001 RAL-307_100b 2197 chr3L 9533738 9533786 chr3L 9541312 9541366 412 23 7576 14.5 33.0 23.8 0.9 7628 chr3L 9533738 intergenic not near genes chr3L 9537552 intergenic not near genes chr3L 9541366 intergenic not near genes chr3L_23_9535001 chr3L_9535001 RAL-307_100b 2198 chr3L 9571877 9571887 chr3L 9572250 9572260 jockey 5 373 27.5 1.5 14.5 0.3 383 chr3L 9571877 intron CG42673 + chr3L 9572068 intron CG42673 + chr3L 9572260 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-307_100b 2199 chr3L 9571889 9571938 chr3L 9572247 9572273 jockey 17 363 9.0 1.5 5.2 2.7 384 chr3L 9571889 intron CG42673 + chr3L 9572081 intron CG42673 + chr3L 9572273 intron CG42673 + chr3L_17_9570001 chr3L_9570001 RAL-307_100b 2200 chr3L 9575882 9575948 chr3L 9580985 9581006 jockey 51 5097 11.5 13.0 12.2 3.9 5124 chr3L 9575882 intron CG42673 + chr3L 9578444 intron CG42673 + chr3L 9581006 intron CG42673 + chr3L_51_9575001 chr3L_9575001 RAL-307_100b 2201 chr3L 9600318 9600375 chr3L 9600442 9600499 24 124 9.5 0.5 5.0 4.0 181 chr3L 9600318 3` UTR CG3222 + chr3L 9600408 intergenic CG3222 +,CG3088 - chr3L 9600499 3` UTR CG3088 - chr3L_24_9600001 chr3L_9600001 RAL-307_100b 2202 chr3L 9604221 9604247 chr3L 9604340 9604366 11 117 0.5 7.5 4.0 2.2 145 chr3L 9604221 intron CG3280 + chr3L 9604294 intron CG3280 + chr3L 9604366 intron CG3280 + chr3L_11_9600001 chr3L_9600001 RAL-307_100b 2203 chr3L 9629710 9629769 chr3L 9629811 9629870 29 100 8.5 10.5 9.5 2.8 160 chr3L 9629710 intron CG8336 + chr3L 9629790 intron CG8336 + chr3L 9629870 intron CG8336 + chr3L_29_9625001 chr3L_9625001 RAL-307_100b 2204 chr3L 9689483 9689537 chr3L 9689588 9689633 54 104 17.5 29.5 23.5 2.2 150 chr3L 9689483 intron CG6767 - chr3L 9689558 intron CG6767 - chr3L 9689633 intron CG6767 - chr3L_54_9685001 chr3L_9685001 RAL-307_100b 2205 chr3L 9697746 9697801 chr3L 9697863 9697912 44 115 17.0 17.5 17.2 2.4 166 chr3L 9697746 intergenic not near genes chr3L 9697829 intergenic not near genes chr3L 9697912 intergenic UbcD4 + chr3L_44_9695001 chr3L_9695001 RAL-307_100b 2206 chr3L 9715576 9715580 chr3L 9715677 9715681 7 101 29.5 14.5 22.0 0.3 105 chr3L 9715576 intron vsg + chr3L 9715628 intron vsg + chr3L 9715681 intron vsg + chr3L_7_9715001 chr3L_9715001 RAL-307_100b 2207 chr3L 9715581 9715625 chr3L 9715672 9715727 22 98 11.5 12.0 11.8 1.7 146 chr3L 9715581 intron vsg + chr3L 9715654 intron vsg + chr3L 9715727 intron vsg + chr3L_22_9715001 chr3L_9715001 RAL-307_100b 2208 chr3L 9741598 9741624 chr3L 9741715 9741741 23 116 18.5 14.0 16.2 1.3 143 chr3L 9741598 intron,intron CG42268 -,CR44348 + chr3L 9741670 intron,intron CG42268 -,CR44348 + chr3L 9741741 intron,intron CG42268 -,CR44348 + chr3L_23_9740001 chr3L_9740001 RAL-307_100b 2209 chr3L 9741625 9741655 chr3L 9741714 9741772 8 114 6.5 14.0 10.2 0.7 147 chr3L 9741625 intron,intron CG42268 -,CR44348 + chr3L 9741698 intron,intron CG42268 -,CR44348 + chr3L 9741772 intron,intron CG42268 -,CR44348 + chr3L_8_9740001 chr3L_9740001 RAL-307_100b 2210 chr3L 9809704 9809739 chr3L 9809804 9809841 27 97 23.0 28.0 25.5 1.0 137 chr3L 9809704 intergenic not near genes chr3L 9809772 intergenic not near genes chr3L 9809841 intergenic not near genes chr3L_27_9805001 chr3L_9805001 RAL-307_100b 2211 chr3L 9809741 9809746 chr3L 9809803 9809848 5 86 18.5 28.5 23.5 0.2 107 chr3L 9809741 intergenic not near genes chr3L 9809794 intergenic not near genes chr3L 9809848 intergenic not near genes chr3L_5_9805001 chr3L_9805001 RAL-307_100b 2212 chr3L 9839977 9840036 chr3L 9840103 9840162 43 124 8.0 14.5 11.2 3.5 185 chr3L 9839977 3` UTR RasGAP1 - chr3L 9840070 3` UTR RasGAP1 - chr3L 9840162 3` UTR RasGAP1 - chr3L_43_9840001 chr3L_9840001 RAL-307_100b 2213 chr3L 9871711 9871754 chr3L 9871877 9871908 38 165 10.5 15.5 13.0 2.7 197 chr3L 9871711 intergenic not near genes chr3L 9871810 intergenic not near genes chr3L 9871908 intergenic not near genes chr3L_38_9870001 chr3L_9870001 RAL-307_100b 2214 chr3L 9929648 9929700 chr3L 9938453 9938505 roo 43 8802 16.0 18.0 17.0 2.4 8857 chr3L 9929648 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938505 intron CG34356 + chr3L_43_9930001 chr3L_9930001 RAL-307_100b 2215 chr3L 9973973 9973994 chr3L 9974097 9974118 11 123 15.0 0.0 7.5 1.3 145 chr3L 9973973 3` UTR,3` UTR CG42455 +,vnc + chr3L 9974046 intergenic CG42455 +,vnc + chr3L 9974118 intergenic CG42455 +,vnc + chr3L_11_9970001 chr3L_9970001 RAL-307_100b 2216 chr3L 9976957 9976989 chr3L 9977045 9977079 18 102 0.0 11.0 5.5 2.8 122 chr3L 9976957 intron dpr6 + chr3L 9977018 intron dpr6 + chr3L 9977079 intron dpr6 + chr3L_18_9975001 chr3L_9975001 RAL-307_100b 2217 chr3L 9987084 9987145 chr3L 9987187 9987248 46 96 14.0 11.5 12.8 3.3 164 chr3L 9987084 intron dpr6 + chr3L 9987166 intron dpr6 + chr3L 9987248 intron dpr6 + chr3L_46_9985001 chr3L_9985001 RAL-307_100b 2218 chr3L 9992677 9992733 chr3L 9992778 9992835 10 100 9.0 1.5 5.2 1.6 158 chr3L 9992677 intron dpr6 + chr3L 9992756 intron dpr6 + chr3L 9992835 intron dpr6 + chr3L_10_9990001 chr3L_9990001 RAL-307_100b 2219 chr3L 9994075 9994087 chr3L 9994186 9994198 5 111 11.5 17.0 14.2 0.3 123 chr3L 9994075 intron dpr6 + chr3L 9994136 intron dpr6 + chr3L 9994198 intron dpr6 + chr3L_5_9990001 chr3L_9990001 RAL-307_100b 2220 chr3L 10003125 10003181 chr3L 10003247 10003303 48 122 7.5 9.0 8.2 5.2 178 chr3L 10003125 intron dpr6 + chr3L 10003214 intron dpr6 + chr3L 10003303 intron dpr6 + chr3L_48_10000001 chr3L_10000001 RAL-307_100b 2221 chr3L 10007164 10007206 chr3L 10007292 10007334 34 127 8.5 14.5 11.5 2.7 170 chr3L 10007164 intron dpr6 + chr3L 10007249 intron dpr6 + chr3L 10007334 intron dpr6 + chr3L_34_10005001 chr3L_10005001 RAL-307_100b 2222 chr3L 10016531 10016585 chr3L 10016640 10016699 54 111 12.0 10.5 11.2 4.4 168 chr3L 10016531 intron dpr6 + chr3L 10016615 intron dpr6 + chr3L 10016699 intron dpr6 + chr3L_54_10015001 chr3L_10015001 RAL-307_100b 2223 chr3L 10032551 10032558 chr3L 10032663 10032670 7 112 0.0 28.5 14.2 0.5 119 chr3L 10032551 intron dpr6 + chr3L 10032610 intron dpr6 + chr3L 10032670 intron dpr6 + chr3L_7_10030001 chr3L_10030001 RAL-307_100b 2224 chr3L 10082541 10082581 chr3L 10082647 10082688 26 106 6.0 8.5 7.2 3.2 147 chr3L 10082541 intron dpr6 + chr3L 10082614 intron dpr6 + chr3L 10082688 intron dpr6 + chr3L_26_10080001 chr3L_10080001 RAL-307_100b 2225 chr3L 10127720 10127726 chr3L 10127822 10127823 8 101 39.5 1.5 20.5 0.4 103 chr3L 10127720 intron dpr6 + chr3L 10127772 intron dpr6 + chr3L 10127823 intron dpr6 + chr3L_8_10125001 chr3L_10125001 RAL-307_100b 2226 chr3L 10127727 10127767 chr3L 10127814 10127829 36 94 18.5 7.5 13.0 2.6 102 chr3L 10127727 intron dpr6 + chr3L 10127778 intron dpr6 + chr3L 10127829 intron dpr6 + chr3L_36_10125001 chr3L_10125001 RAL-307_100b 2227 chr3L 10143956 10144011 chr3L 10144379 10144434 60 420 11.0 11.5 11.2 4.9 478 chr3L 10143956 intergenic not near genes chr3L 10144195 intergenic not near genes chr3L 10144434 intergenic not near genes chr3L_60_10140001 chr3L_10140001 RAL-307_100b 2228 chr3L 10161428 10161457 chr3L 10161519 10161561 34 99 0.0 17.5 8.8 3.5 133 chr3L 10161428 intron dpr10 - chr3L 10161494 intron dpr10 - chr3L 10161561 intron dpr10 - chr3L_34_10160001 chr3L_10160001 RAL-307_100b 2229 chr3L 10161458 10161460 chr3L 10161510 10161564 6 86 0.0 13.5 6.8 0.8 106 chr3L 10161458 intron dpr10 - chr3L 10161511 intron dpr10 - chr3L 10161564 intron dpr10 - chr3L_6_10160001 chr3L_10160001 RAL-307_100b 2230 chr3L 10186648 10186663 chr3L 10186766 10186770 10 117 20.0 0.0 10.0 0.9 122 chr3L 10186648 intergenic not near genes chr3L 10186709 intergenic not near genes chr3L 10186770 intergenic not near genes chr3L_10_10185001 chr3L_10185001 RAL-307_100b 2231 chr3L 10214706 10214831 chr3L 10214818 10214955 41 129 0.0 0.0 0.0 41.0 249 chr3L 10214706 intergenic not near genes chr3L 10214830 intergenic not near genes chr3L 10214955 intergenic not near genes chr3L_41_10210001 chr3L_10210001 RAL-307_100b 2232 chr3L 10222740 10222761 chr3L 10222845 10222866 21 105 4.5 24.0 14.2 1.4 126 chr3L 10222740 intron scramb1 - chr3L 10222803 intron scramb1 - chr3L 10222866 intron scramb1 - chr3L_21_10220001 chr3L_10220001 RAL-307_100b 2233 chr3L 10222763 10222776 chr3L 10222827 10222881 16 98 4.5 14.0 9.2 1.6 118 chr3L 10222763 intron scramb1 - chr3L 10222822 intron scramb1 - chr3L 10222881 intron scramb1 - chr3L_16_10220001 chr3L_10220001 RAL-307_100b 2234 chr3L 10298651 10298657 chr3L 10298763 10298769 7 112 0.5 11.0 5.8 1.0 118 chr3L 10298651 intergenic not near genes chr3L 10298710 intergenic not near genes chr3L 10298769 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-307_100b 2235 chr3L 10298660 10298701 chr3L 10298762 10298813 37 108 0.5 11.0 5.8 5.4 153 chr3L 10298660 intergenic not near genes chr3L 10298736 intergenic not near genes chr3L 10298813 intergenic not near genes chr3L_37_10295001 chr3L_10295001 RAL-307_100b 2236 chr3L 10300028 10300054 chr3L 10300145 10300151 27 114 18.0 9.5 13.8 1.8 123 chr3L 10300028 intergenic not near genes chr3L 10300090 intergenic not near genes chr3L 10300151 intergenic not near genes chr3L_27_10300001 chr3L_10300001 RAL-307_100b 2237 chr3L 10308720 10308765 chr3L 10308822 10308867 44 99 11.0 24.0 17.5 2.4 147 chr3L 10308720 intergenic not near genes chr3L 10308794 intergenic not near genes chr3L 10308867 intergenic not near genes chr3L_44_10305001 chr3L_10305001 RAL-307_100b 2238 chr3L 10328090 10328129 chr3L 10328227 10328266 30 137 17.5 15.0 16.2 1.7 176 chr3L 10328090 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328266 intergenic not near genes chr3L_30_10325001 chr3L_10325001 RAL-307_100b 2239 chr3L 10397271 10397323 chr3L 10397375 10397413 45 102 24.5 9.5 17.0 2.5 142 chr3L 10397271 intergenic not near genes chr3L 10397342 intergenic not near genes chr3L 10397413 intergenic not near genes chr3L_45_10395001 chr3L_10395001 RAL-307_100b 2240 chr3L 10414928 10414935 chr3L 10417325 10417332 Doc 6 2396 29.0 21.0 25.0 0.2 2404 chr3L 10414928 intergenic CG12362 + chr3L 10416130 intergenic not near genes chr3L 10417332 intergenic not near genes chr3L_6_10415001 chr3L_10415001 RAL-307_100b 2241 chr3L 10414936 10414970 chr3L 10417323 10417363 Doc 38 2393 12.5 18.0 15.2 2.3 2427 chr3L 10414936 intergenic CG12362 + chr3L 10416150 intergenic not near genes chr3L 10417363 intergenic not near genes chr3L_38_10415001 chr3L_10415001 RAL-307_100b 2242 chr3L 10414971 10414976 chr3L 10417312 10417314 Doc 6 2374 8.5 14.0 11.2 0.5 2343 chr3L 10414971 intergenic CG12362 + chr3L 10416142 intergenic not near genes chr3L 10417314 intergenic not near genes chr3L_6_10415001 chr3L_10415001 RAL-307_100b 2243 chr3L 10417554 10417605 chr3L 10417646 10417684 44 96 20.0 16.0 18.0 2.3 130 chr3L 10417554 intergenic not near genes chr3L 10417619 intergenic not near genes chr3L 10417684 intergenic not near genes chr3L_44_10415001 chr3L_10415001 RAL-307_100b 2244 chr3L 10469911 10469918 chr3L 10470012 10470019 6 101 34.5 3.5 19.0 0.3 108 chr3L 10469911 intergenic not near genes chr3L 10469965 intergenic not near genes chr3L 10470019 intergenic not near genes chr3L_6_10465001 chr3L_10465001 RAL-307_100b 2245 chr3L 10469919 10469965 chr3L 10470009 10470025 47 99 10.0 3.5 6.8 6.0 106 chr3L 10469919 intergenic not near genes chr3L 10469972 intergenic not near genes chr3L 10470025 intergenic not near genes chr3L_47_10465001 chr3L_10465001 RAL-307_100b 2246 chr3L 10476173 10476210 chr3L 10476315 10476349 18 139 19.5 0.5 10.0 1.6 176 chr3L 10476173 intergenic not near genes chr3L 10476261 intergenic not near genes chr3L 10476349 intergenic not near genes chr3L_18_10475001 chr3L_10475001 RAL-307_100b 2247 chr3L 10495525 10495579 chr3L 10496116 10496170 43 588 13.5 10.5 12.0 3.3 645 chr3L 10495525 intron A2bp1 + chr3L 10495848 intron A2bp1 + chr3L 10496170 intron A2bp1 + chr3L_43_10495001 chr3L_10495001 RAL-307_100b 2248 chr3L 10565111 10565163 chr3L 10565880 10565932 41 768 13.0 15.0 14.0 2.7 821 chr3L 10565111 intron A2bp1 + chr3L 10565522 intron A2bp1 + chr3L 10565932 intron A2bp1 + chr3L_41_10565001 chr3L_10565001 RAL-307_100b 2249 chr3L 10584254 10584300 chr3L 10584366 10584410 36 109 17.5 12.0 14.8 2.3 156 chr3L 10584254 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584410 intron A2bp1 + chr3L_36_10580001 chr3L_10580001 RAL-307_100b 2250 chr3L 10600433 10600477 chr3L 10600538 10600584 35 106 14.5 6.0 10.2 3.1 151 chr3L 10600433 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600584 intergenic not near genes chr3L_35_10600001 chr3L_10600001 RAL-307_100b 2251 chr3L 10603689 10603730 chr3L 10603904 10603938 34 211 1.0 12.5 6.8 4.4 249 chr3L 10603689 intergenic not near genes chr3L 10603814 intergenic not near genes chr3L 10603938 intergenic not near genes chr3L_34_10600001 chr3L_10600001 RAL-307_100b 2252 chr3L 10620230 10620240 chr3L 10620331 10620341 4 101 8.0 3.0 5.5 0.6 111 chr3L 10620230 intergenic not near genes chr3L 10620286 intergenic not near genes chr3L 10620341 intergenic not near genes chr3L_4_10620001 chr3L_10620001 RAL-307_100b 2253 chr3L 10621833 10621876 chr3L 10621940 10621988 19 110 6.5 17.0 11.8 1.5 155 chr3L 10621833 intergenic not near genes chr3L 10621910 intergenic not near genes chr3L 10621988 intergenic not near genes chr3L_19_10620001 chr3L_10620001 RAL-307_100b 2254 chr3L 10658057 10658063 chr3L 10658159 10658165 4 102 17.0 0.0 8.5 0.4 108 chr3L 10658057 intron CG32066 - chr3L 10658111 intron CG32066 - chr3L 10658165 intron CG32066 - chr3L_4_10655001 chr3L_10655001 RAL-307_100b 2255 chr3L 10658065 10658211 chr3L 10658157 10658363 95 126 0.0 0.0 0.0 95.0 298 chr3L 10658065 intron CG32066 - chr3L 10658214 intron CG32066 - chr3L 10658363 intron CG32066 - chr3L_95_10655001 chr3L_10655001 RAL-307_100b 2256 chr3L 10739786 10739808 chr3L 10739895 10739911 4 107 9.5 0.5 5.0 0.7 125 chr3L 10739786 intergenic not near genes chr3L 10739848 intergenic not near genes chr3L 10739911 intergenic not near genes chr3L_4_10735001 chr3L_10735001 RAL-307_100b 2257 chr3L 10762804 10762864 chr3L 10762913 10762923 53 101 10.5 17.5 14.0 3.5 119 chr3L 10762804 intergenic not near genes chr3L 10762864 intergenic not near genes chr3L 10762923 intergenic not near genes chr3L_53_10760001 chr3L_10760001 RAL-307_100b 2258 chr3L 10947487 10947494 chr3L 10947588 10947595 5 101 1.0 0.0 0.5 3.3 108 chr3L 10947487 intergenic not near genes chr3L 10947541 intergenic not near genes chr3L 10947595 intergenic not near genes chr3L_5_10945001 chr3L_10945001 RAL-307_100b 2259 chr3L 10951277 10951284 chr3L 10951378 10951385 5 101 0.0 11.0 5.5 0.8 108 chr3L 10951277 intergenic not near genes chr3L 10951331 intergenic not near genes chr3L 10951385 intergenic not near genes chr3L_5_10950001 chr3L_10950001 RAL-307_100b 2260 chr3L 10951286 10951297 chr3L 10951370 10951398 11 99 0.0 6.5 3.2 2.6 112 chr3L 10951286 intergenic not near genes chr3L 10951342 intergenic not near genes chr3L 10951398 intergenic not near genes chr3L_11_10950001 chr3L_10950001 RAL-307_100b 2261 chr3L 10956430 10956466 chr3L 10956567 10956609 34 139 5.0 9.5 7.2 4.1 179 chr3L 10956430 intergenic not near genes chr3L 10956520 intergenic not near genes chr3L 10956609 intergenic not near genes chr3L_34_10955001 chr3L_10955001 RAL-307_100b 2262 chr3L 10956978 10957035 chr3L 10957079 10957136 52 95 15.5 17.5 16.5 3.0 158 chr3L 10956978 intergenic not near genes chr3L 10957057 intergenic not near genes chr3L 10957136 intergenic not near genes chr3L_52_10955001 chr3L_10955001 RAL-307_100b 2263 chr3L 10958184 10958236 chr3L 10958288 10958343 32 105 7.0 1.0 4.0 6.4 159 chr3L 10958184 intergenic not near genes chr3L 10958264 intergenic not near genes chr3L 10958343 intergenic not near genes chr3L_32_10955001 chr3L_10955001 RAL-307_100b 2264 chr3L 11018540 11018576 chr3L 11018651 11018686 17 110 7.5 17.0 12.2 1.3 146 chr3L 11018540 intergenic not near genes chr3L 11018613 intergenic not near genes chr3L 11018686 intergenic not near genes chr3L_17_11015001 chr3L_11015001 RAL-307_100b 2265 chr3L 11029409 11029444 chr3L 11029545 11029580 29 134 13.5 14.5 14.0 1.9 171 chr3L 11029409 3` UTR CG32081 + chr3L 11029494 intergenic CG32081 + chr3L 11029580 intergenic CG32081 + chr3L_29_11025001 chr3L_11025001 RAL-307_100b 2266 chr3L 11083482 11083536 chr3L 11083605 11083659 58 120 9.5 17.0 13.2 4.1 177 chr3L 11083482 exon JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083659 intron JIL-1 - chr3L_58_11080001 chr3L_11080001 RAL-307_100b 2267 chr3L 11087038 11087090 chr3L 11088851 11088904 S-element 54 1809 18.5 14.0 16.2 3.1 1866 chr3L 11087038 intron JIL-1 - chr3L 11087971 intron JIL-1 - chr3L 11088904 intron JIL-1 - chr3L_54_11085001 chr3L_11085001 RAL-307_100b 2268 chr3L 11105268 11105297 chr3L 11107004 11107032 X-element 30 1735 22.0 15.5 18.8 1.5 1764 chr3L 11105268 intergenic not near genes chr3L 11106150 intergenic not near genes chr3L 11107032 exon CG32073 - chr3L_30_11105001 chr3L_11105001 RAL-307_100b 2269 chr3L 11105300 11105328 chr3L 11107001 11107048 X-element 29 1728 14.0 13.5 13.8 2.0 1748 chr3L 11105300 intergenic not near genes chr3L 11106174 intergenic not near genes chr3L 11107048 exon CG32073 - chr3L_29_11105001 chr3L_11105001 RAL-307_100b 2270 chr3L 11113968 11113995 chr3L 11114070 11114097 11 102 24.0 0.0 12.0 0.8 129 chr3L 11113968 intergenic fd68A -,Sod - chr3L 11114032 intergenic fd68A -,Sod - chr3L 11114097 intergenic fd68A -,Sod - chr3L_11_11110001 chr3L_11110001 RAL-307_100b 2271 chr3L 11127291 11127296 chr3L 11127375 11127402 5 101 0.0 0.0 0.0 5.0 111 chr3L 11127291 intron CG42575 + chr3L 11127346 intron CG42575 + chr3L 11127402 intron CG42575 + chr3L_5_11125001 chr3L_11125001 RAL-307_100b 2272 chr3L 11135507 11135517 chr3L 11135762 11135772 9 255 13.5 1.0 7.2 1.1 265 chr3L 11135507 intergenic CG14143 + chr3L 11135640 intergenic CG14143 +,CG32082 + chr3L 11135772 intergenic CG32082 +,CG14143 + chr3L_9_11135001 chr3L_11135001 RAL-307_100b 2273 chr3L 11145535 11145552 chr3L 11145640 11145665 13 109 0.0 16.5 8.2 1.4 130 chr3L 11145535 intron CG32082 + chr3L 11145600 intron CG32082 + chr3L 11145665 intron CG32082 + chr3L_13_11145001 chr3L_11145001 RAL-307_100b 2274 chr3L 11237647 11237653 chr3L 11237752 11237758 5 105 20.5 0.0 10.2 0.4 111 chr3L 11237647 intergenic CR44718 -,CR44719 + chr3L 11237702 intergenic CR44718 -,CR44719 + chr3L 11237758 intergenic CR44718 -,CR44719 + chr3L_5_11235001 chr3L_11235001 RAL-307_100b 2275 chr3L 11241753 11241793 chr3L 11241860 11241899 28 106 10.0 8.0 9.0 2.8 146 chr3L 11241753 intergenic not near genes chr3L 11241826 intergenic not near genes chr3L 11241899 intergenic not near genes chr3L_28_11240001 chr3L_11240001 RAL-307_100b 2276 chr3L 11264441 11264493 chr3L 11271418 11271470 17.6 37 6973 21.0 9.5 15.2 2.3 7029 chr3L 11264441 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271470 intergenic not near genes chr3L_37_11265001 chr3L_11265001 RAL-307_100b 2277 chr3L 11329669 11329673 chr3L 11332899 11332903 jockey 4 3230 33.0 16.0 24.5 0.2 3234 chr3L 11329669 intergenic not near genes chr3L 11331286 intergenic not near genes chr3L 11332903 intergenic not near genes chr3L_4_11330001 chr3L_11330001 RAL-307_100b 2278 chr3L 11329674 11329689 chr3L 11332897 11332919 jockey 8 3228 28.5 15.5 22.0 0.3 3245 chr3L 11329674 intergenic not near genes chr3L 11331296 intergenic not near genes chr3L 11332919 intergenic not near genes chr3L_8_11330001 chr3L_11330001 RAL-307_100b 2279 chr3L 11329691 11329726 chr3L 11332893 11332941 jockey 26 3224 12.0 14.0 13.0 1.9 3250 chr3L 11329691 intergenic not near genes chr3L 11331316 intergenic not near genes chr3L 11332941 intergenic not near genes chr3L_26_11330001 chr3L_11330001 RAL-307_100b 2280 chr3L 11435535 11435591 chr3L 11435729 11435785 67 192 17.0 16.5 16.8 3.8 250 chr3L 11435535 intergenic CG6149 -,CR44548 + chr3L 11435660 5` UTR CR44548 + chr3L 11435785 5` UTR CR44548 + chr3L_67_11435001 chr3L_11435001 RAL-307_100b 2281 chr3L 11441362 11441372 chr3L 11441466 11441476 6 104 0.0 16.5 8.2 0.7 114 chr3L 11441362 intergenic not near genes chr3L 11441419 intergenic not near genes chr3L 11441476 intergenic not near genes chr3L_6_11440001 chr3L_11440001 RAL-307_100b 2282 chr3L 11499039 11499046 chr3L 11508223 11508227 roo 5 9183 16.5 0.0 8.2 0.5 9188 chr3L 11499039 3` UTR chrb + chr3L 11503633 intergenic not near genes chr3L 11508227 intergenic CG33500 + chr3L_5_11500001 chr3L_11500001 RAL-307_100b 2283 chr3L 11564791 11564795 chr3L 11572430 11572440 412 4 7645 17.0 32.0 24.5 0.2 7649 chr3L 11564791 exon CG33267 + chr3L 11568616 intron CG33267 + chr3L 11572440 exon CG33267 + chr3L_4_11565001 chr3L_11565001 RAL-307_100b 2284 chr3L 11564803 11564805 chr3L 11572407 11572441 412 4 7626 12.0 18.0 15.0 0.2 7638 chr3L 11564803 exon CG33267 + chr3L 11568622 intron CG33267 + chr3L 11572441 exon CG33267 + chr3L_4_11565001 chr3L_11565001 RAL-307_100b 2285 chr3L 11579530 11579583 chr3L 11579661 11579714 51 129 15.0 5.5 10.2 4.6 184 chr3L 11579530 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579714 intergenic CG43390 - chr3L_51_11575001 chr3L_11575001 RAL-307_100b 2286 chr3L 11579712 11579726 chr3L 11580883 11580883 9 1169 5.5 49.5 27.5 0.3 1171 chr3L 11579712 intergenic CG43390 - chr3L 11580298 intergenic CG43390 - chr3L 11580883 exon CG43391 - chr3L_9_11580001 chr3L_11580001 RAL-307_100b 2287 chr3L 11590246 11590273 chr3L 11590361 11590385 11 114 2.0 6.0 4.0 2.2 139 chr3L 11590246 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590385 intergenic CG7377 +,CG33268 - chr3L_11_11590001 chr3L_11590001 RAL-307_100b 2288 chr3L 11648492 11648514 chr3L 11648600 11648609 20 106 27.0 0.0 13.5 1.4 117 chr3L 11648492 intergenic RIOK1 -,CG7339 + chr3L 11648550 intergenic RIOK1 -,CG7339 + chr3L 11648609 intergenic RIOK1 -,CG7339 + chr3L_20_11645001 chr3L_11645001 RAL-307_100b 2289 chr3L 11659402 11659454 chr3L 11659752 11659804 44 346 7.0 18.5 12.8 3.2 402 chr3L 11659402 intron CG32085 - chr3L 11659603 intron CG32085 - chr3L 11659804 intron CG32085 - chr3L_44_11655001 chr3L_11655001 RAL-307_100b 2290 chr3L 11678069 11678125 chr3L 11678181 11678236 38 111 9.5 13.0 11.2 3.1 167 chr3L 11678069 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678236 intron CG32085 - chr3L_38_11675001 chr3L_11675001 RAL-307_100b 2291 chr3L 11723065 11723111 chr3L 11727885 11727930 Doc 47 4817 17.0 20.0 18.5 2.4 4865 chr3L 11723065 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_47_11725001 chr3L_11725001 RAL-307_100b 2292 chr3L 11743992 11744010 chr3L 11744124 11744143 15 133 35.0 15.5 25.2 0.6 151 chr3L 11743992 exon CG6024 - chr3L 11744068 intron CG6024 - chr3L 11744143 intron CG6024 - chr3L_15_11740001 chr3L_11740001 RAL-307_100b 2293 chr3L 11744011 11744046 chr3L 11744123 11744179 16 124 14.5 14.0 14.2 1.1 168 chr3L 11744011 exon CG6024 - chr3L 11744095 intron CG6024 - chr3L 11744179 intron CG6024 - chr3L_16_11740001 chr3L_11740001 RAL-307_100b 2294 chr3L 11746643 11746683 chr3L 11746747 11746787 13 103 0.5 14.5 7.5 1.5 144 chr3L 11746643 intron CG6024 - chr3L 11746715 intron CG6024 - chr3L 11746787 intron CG6024 - chr3L_13_11745001 chr3L_11745001 RAL-307_100b 2295 chr3L 11757893 11757937 chr3L 11758014 11758054 15 119 22.5 0.0 11.2 1.2 161 chr3L 11757893 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758054 intron CG6024 - chr3L_15_11755001 chr3L_11755001 RAL-307_100b 2296 chr3L 7749471 7749471 chr3L 11777678 11777678 4 4028207 53.0 84.5 68.8 0.1 4028207 chr3L 7749471 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_9760001 chr3L_9760001 RAL-307_100b 2297 chr3L 9313026 9313027 chr3L 11777678 11777678 6 2464651 17.5 84.5 51.0 0.1 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_10545001 chr3L_10545001 RAL-307_100b 2298 chr3L 11777678 11777678 chr3L 12163305 12163305 7 385627 78.0 69.0 73.5 0.1 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_7_11970001 chr3L_11970001 RAL-307_100b 2299 chr3L 11846397 11846411 chr3L 11846513 11846544 23 130 3.0 21.0 12.0 1.8 147 chr3L 11846397 intergenic not near genes chr3L 11846470 intergenic not near genes chr3L 11846544 intergenic not near genes chr3L_23_11845001 chr3L_11845001 RAL-307_100b 2300 chr3L 11847142 11847174 chr3L 11847257 11847289 28 114 10.5 0.0 5.2 4.5 147 chr3L 11847142 intergenic CG12521 - chr3L 11847216 intergenic CG12521 - chr3L 11847289 intergenic CG12521 - chr3L_28_11845001 chr3L_11845001 RAL-307_100b 2301 chr3L 11849307 11849331 chr3L 11849432 11849456 17 125 24.5 15.0 19.8 0.8 149 chr3L 11849307 intergenic not near genes chr3L 11849382 intergenic not near genes chr3L 11849456 intergenic not near genes chr3L_17_11845001 chr3L_11845001 RAL-307_100b 2302 chr3L 11849332 11849356 chr3L 11849431 11849480 26 118 10.0 14.5 12.2 2.0 148 chr3L 11849332 intergenic not near genes chr3L 11849406 intergenic not near genes chr3L 11849480 intergenic not near genes chr3L_26_11845001 chr3L_11845001 RAL-307_100b 2303 chr3L 11850114 11850170 chr3L 11850234 11850275 40 118 15.5 1.0 8.2 4.3 161 chr3L 11850114 intergenic not near genes chr3L 11850194 intergenic CG44837 - chr3L 11850275 intergenic CG44837 - chr3L_40_11850001 chr3L_11850001 RAL-307_100b 2304 chr3L 11864528 11864553 chr3L 11865848 11865873 pogo 20 1320 36.0 20.5 28.2 0.7 1345 chr3L 11864528 intron CG44837 - chr3L 11865200 intron CG44837 - chr3L 11865873 intron CG44837 - chr3L_20_11865001 chr3L_11865001 RAL-307_100b 2305 chr3L 11864554 11864585 chr3L 11865847 11865905 pogo 27 1312 18.5 19.5 19.0 1.4 1351 chr3L 11864554 intron CG44837 - chr3L 11865230 intron CG44837 - chr3L 11865905 intron CG44837 - chr3L_27_11865001 chr3L_11865001 RAL-307_100b 2306 chr3L 11887233 11887286 chr3L 11887355 11887417 15 122 17.0 0.5 8.8 1.5 184 chr3L 11887233 intron CG44837 - chr3L 11887325 intron,3` UTR CG44837 -,CG5897 - chr3L 11887417 intron,3` UTR CG44837 -,CG5897 - chr3L_15_11885001 chr3L_11885001 RAL-307_100b 2307 chr3L 11913114 11913141 chr3L 11913497 11913524 26 380 23.5 11.5 17.5 1.4 410 chr3L 11913114 intron CG44837 - chr3L 11913319 intron CG44837 - chr3L 11913524 intron CG44837 - chr3L_26_11910001 chr3L_11910001 RAL-307_100b 2308 chr3L 11913142 11913170 chr3L 11913494 11913512 25 375 11.5 11.5 11.5 2.0 370 chr3L 11913142 intron CG44837 - chr3L 11913327 intron CG44837 - chr3L 11913512 intron CG44837 - chr3L_25_11910001 chr3L_11910001 RAL-307_100b 2309 chr3L 11943469 11943520 chr3L 11943595 11943646 48 123 9.5 11.5 10.5 4.2 177 chr3L 11943469 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943646 3` UTR CG5883 - chr3L_48_11940001 chr3L_11940001 RAL-307_100b 2310 chr3L 12013886 12013938 chr3L 12014002 12014052 55 114 13.5 15.0 14.2 3.6 166 chr3L 12013886 intron rols - chr3L 12013969 intron rols - chr3L 12014052 intron rols - chr3L_55_12010001 chr3L_12010001 RAL-307_100b 2311 chr3L 12022422 12022442 chr3L 12022611 12022631 18 189 6.5 19.5 13.0 1.3 209 chr3L 12022422 intron rols - chr3L 12022526 intron rols - chr3L 12022631 intron rols - chr3L_18_12020001 chr3L_12020001 RAL-307_100b 2312 chr3L 12075401 12075460 chr3L 12075515 12075569 22 112 10.5 0.0 5.2 3.5 168 chr3L 12075401 intron Sema-5c - chr3L 12075485 intron Sema-5c - chr3L 12075569 intron Sema-5c - chr3L_22_12075001 chr3L_12075001 RAL-307_100b 2313 chr3L 12089055 12089112 chr3L 12089160 12089217 53 104 12.0 13.0 12.5 3.9 162 chr3L 12089055 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089217 3` UTR CG17154 + chr3L_53_12085001 chr3L_12085001 RAL-307_100b 2314 chr3L 12092379 12092421 chr3L 12092475 12092523 29 99 7.5 14.0 10.8 2.5 144 chr3L 12092379 intergenic not near genes chr3L 12092451 intergenic not near genes chr3L 12092523 intergenic not near genes chr3L_29_12090001 chr3L_12090001 RAL-307_100b 2315 chr3L 12119734 12119791 chr3L 12119856 12119913 49 120 10.0 9.5 9.8 4.5 179 chr3L 12119734 3` UTR ssp + chr3L 12119824 intergenic ssp +,CG11560 + chr3L 12119913 intergenic CG11560 +,ssp + chr3L_49_12115001 chr3L_12115001 RAL-307_100b 2316 chr3L 12157157 12157185 chr3L 12158369 12158398 15 1213 100.0 99.5 99.8 0.1 1241 chr3L 12157157 3` UTR CG9760 - chr3L 12157778 3` UTR CG9760 - chr3L 12158398 intron CG9760 - chr3L_15_12155001 chr3L_12155001 RAL-307_100b 2317 chr3L 12158489 12158491 chr3L 12158728 12158736 5 244 87.0 74.5 80.8 0.1 247 chr3L 12158489 intron CG9760 - chr3L 12158612 intron CG9760 - chr3L 12158736 intron CG9760 - chr3L_5_12155001 chr3L_12155001 RAL-307_100b 2318 chr3L 12158493 12158499 chr3L 12158726 12158745 4 243 86.5 71.5 79.0 0.1 252 chr3L 12158493 intron CG9760 - chr3L 12158619 intron CG9760 - chr3L 12158745 intron CG9760 - chr3L_4_12155001 chr3L_12155001 RAL-307_100b 2319 chr3L 12158500 12158524 chr3L 12158716 12158770 32 240 92.0 57.5 74.8 0.4 270 chr3L 12158500 intron CG9760 - chr3L 12158635 intron CG9760 - chr3L 12158770 intron CG9760 - chr3L_32_12155001 chr3L_12155001 RAL-307_100b 2320 chr3L 12158775 12158820 chr3L 12160220 12160280 83 1451 282.5 220.0 251.2 0.3 1505 chr3L 12158775 intron CG9760 - chr3L 12159528 exon CG9760 - chr3L 12160280 intron CG9760 - chr3L_83_12155001 chr3L_12155001 RAL-307_100b 2321 chr3L 12156431 12156487 chr3L 12160291 12160349 49 3867 127.0 165.5 146.2 0.3 3918 chr3L 12156431 3` UTR Nrx-IV + chr3L 12158390 intron CG9760 - chr3L 12160349 intron CG9760 - chr3L_49_12155001 chr3L_12155001 RAL-307_100b 2322 chr3L 12170767 12170824 chr3L 12170874 12170931 36 107 5.0 12.0 8.5 3.8 164 chr3L 12170767 intron Rh7 - chr3L 12170849 intron Rh7 - chr3L 12170931 intron Rh7 - chr3L_36_12170001 chr3L_12170001 RAL-307_100b 2323 chr3L 12231373 12231431 chr3L 12231648 12231705 44 276 118.0 129.0 123.5 0.4 332 chr3L 12231373 intron app - chr3L 12231539 intron app - chr3L 12231705 intron app - chr3L_44_12230001 chr3L_12230001 RAL-307_100b 2324 chr3L 12300802 12300860 chr3L 12300914 12300942 44 110 8.5 11.0 9.8 4.1 140 chr3L 12300802 intergenic CR44550 + chr3L 12300872 intergenic CR44550 + chr3L 12300942 intergenic CR44550 + chr3L_44_12300001 chr3L_12300001 RAL-307_100b 2325 chr3L 12307582 12307620 chr3L 12307687 12307725 24 104 9.0 0.0 4.5 4.4 143 chr3L 12307582 intergenic not near genes chr3L 12307654 intergenic not near genes chr3L 12307725 intergenic not near genes chr3L_24_12305001 chr3L_12305001 RAL-307_100b 2326 chr3L 12369509 12369569 chr3L 12369624 12369657 43 112 10.0 11.0 10.5 3.7 148 chr3L 12369509 intron Ncc69 - chr3L 12369583 intron Ncc69 - chr3L 12369657 intron Ncc69 - chr3L_43_12365001 chr3L_12365001 RAL-307_100b 2327 chr3L 12381523 12381548 chr3L 12381621 12381645 12 102 0.5 7.5 4.0 2.4 122 chr3L 12381523 intron Ncc69 - chr3L 12381584 intron Ncc69 - chr3L 12381645 intron Ncc69 - chr3L_12_12380001 chr3L_12380001 RAL-307_100b 2328 chr3L 12515177 12515234 chr3L 12515283 12515339 47 102 20.0 14.5 17.2 2.6 162 chr3L 12515177 5` UTR tral + chr3L 12515258 5` UTR tral + chr3L 12515339 5` UTR tral + chr3L_47_12515001 chr3L_12515001 RAL-307_100b 2329 chr3L 12555725 12555727 chr3L 12703674 12703676 4 147949 19.0 0.0 9.5 0.4 147951 chr3L 12555725 intron sowah - chr3L 12629700 intron CR32111 + chr3L 12703676 intron mirr + chr3L_4_12625001 chr3L_12625001 RAL-307_100b 2330 chr3L 12578044 12578082 chr3L 12578146 12578195 11 112 5.5 0.0 2.8 2.9 151 chr3L 12578044 intergenic not near genes chr3L 12578120 intergenic not near genes chr3L 12578195 intergenic not near genes chr3L_11_12575001 chr3L_12575001 RAL-307_100b 2331 chr3L 12610970 12611026 chr3L 12611241 12611297 42 270 4.0 11.0 7.5 4.9 327 chr3L 12610970 intron caup + chr3L 12611134 intron caup + chr3L 12611297 intron caup + chr3L_42_12610001 chr3L_12610001 RAL-307_100b 2332 chr3L 12614582 12614599 chr3L 12614745 12614762 11 163 0.0 18.5 9.2 1.1 180 chr3L 12614582 intron caup + chr3L 12614672 intron caup + chr3L 12614762 intron caup + chr3L_11_12610001 chr3L_12610001 RAL-307_100b 2333 chr3L 12626134 12626166 chr3L 12626263 12626300 33 132 3.0 12.5 7.8 3.7 166 chr3L 12626134 intergenic not near genes chr3L 12626217 intergenic not near genes chr3L 12626300 intergenic not near genes chr3L_33_12625001 chr3L_12625001 RAL-307_100b 2334 chr3L 12647925 12647971 chr3L 12648026 12648047 39 97 27.5 7.0 17.2 2.1 122 chr3L 12647925 5` UTR CR32111 + chr3L 12647986 5` UTR CR32111 + chr3L 12648047 5` UTR CR32111 + chr3L_39_12645001 chr3L_12645001 RAL-307_100b 2335 chr3L 12679957 12679962 chr3L 12680066 12680071 5 109 16.5 0.0 8.2 0.5 114 chr3L 12679957 intergenic not near genes chr3L 12680014 intergenic not near genes chr3L 12680071 intergenic not near genes chr3L_5_12680001 chr3L_12680001 RAL-307_100b 2336 chr3L 12681664 12681725 chr3L 12682042 12682103 56 377 11.5 12.0 11.8 4.4 439 chr3L 12681664 intergenic not near genes chr3L 12681884 intergenic not near genes chr3L 12682103 intergenic not near genes chr3L_56_12680001 chr3L_12680001 RAL-307_100b 2337 chr3L 12722271 12722311 chr3L 12722378 12722418 22 104 4.5 13.0 8.8 2.2 147 chr3L 12722271 intergenic not near genes chr3L 12722344 intergenic not near genes chr3L 12722418 intergenic not near genes chr3L_22_12720001 chr3L_12720001 RAL-307_100b 2338 chr3L 12728012 12728043 chr3L 12728121 12728152 6 109 10.5 26.5 18.5 0.3 140 chr3L 12728012 intergenic not near genes chr3L 12728082 intergenic not near genes chr3L 12728152 intergenic not near genes chr3L_6_12725001 chr3L_12725001 RAL-307_100b 2339 chr3L 12788392 12788442 chr3L 12788537 12788587 53 143 14.0 14.5 14.2 3.5 195 chr3L 12788392 intron Atg1 - chr3L 12788490 intron Atg1 - chr3L 12788587 exon Atg1 - chr3L_53_12785001 chr3L_12785001 RAL-307_100b 2340 chr3L 12801954 12802013 chr3L 12802054 12802114 57 98 14.5 13.5 14.0 3.8 160 chr3L 12801954 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802114 intron Atg1 - chr3L_57_12800001 chr3L_12800001 RAL-307_100b 2341 chr3L 12857969 12858005 chr3L 12858089 12858125 35 119 15.5 11.0 13.2 2.5 156 chr3L 12857969 3` UTR CG32107 - chr3L 12858047 3` UTR CG32107 - chr3L 12858125 3` UTR CG32107 - chr3L_35_12855001 chr3L_12855001 RAL-307_100b 2342 chr3L 12867525 12867539 chr3L 12867643 12867657 9 118 21.0 9.0 15.0 0.6 132 chr3L 12867525 intergenic not near genes chr3L 12867591 intergenic not near genes chr3L 12867657 intergenic not near genes chr3L_9_12865001 chr3L_12865001 RAL-307_100b 2343 chr3L 12867540 12867576 chr3L 12867642 12867694 25 116 9.0 9.0 9.0 2.5 154 chr3L 12867540 intergenic not near genes chr3L 12867617 intergenic not near genes chr3L 12867694 intergenic not near genes chr3L_25_12865001 chr3L_12865001 RAL-307_100b 2344 chr3L 12874899 12874955 chr3L 12877216 12877272 jockey 56 2316 14.0 18.5 16.2 3.3 2373 chr3L 12874899 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877272 intergenic not near genes chr3L_56_12875001 chr3L_12875001 RAL-307_100b 2345 chr3L 12892898 12892909 chr3L 12893029 12893040 6 131 9.5 8.0 8.8 0.6 142 chr3L 12892898 intron CG14118 + chr3L 12892969 intron CG14118 + chr3L 12893040 intron CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-307_100b 2346 chr3L 12894786 12894793 chr3L 12894883 12894896 10 102 36.5 32.0 34.2 0.3 110 chr3L 12894786 intergenic CG14118 + chr3L 12894841 intergenic CG14118 + chr3L 12894896 intergenic CG14118 + chr3L_10_12890001 chr3L_12890001 RAL-307_100b 2347 chr3L 12894794 12894801 chr3L 12894882 12894894 10 99 31.5 31.5 31.5 0.3 100 chr3L 12894794 intergenic CG14118 + chr3L 12894844 intergenic CG14118 + chr3L 12894894 intergenic CG14118 + chr3L_10_12890001 chr3L_12890001 RAL-307_100b 2348 chr3L 12894804 12894821 chr3L 12894874 12894891 12 93 31.0 36.0 33.5 0.3 87 chr3L 12894804 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894891 intergenic CG14118 + chr3L_12_12890001 chr3L_12890001 RAL-307_100b 2349 chr3L 12919254 12919260 chr3L 12924763 12924769 Rt1c 10 5508 41.5 14.5 28.0 0.3 5515 chr3L 12919254 intergenic not near genes chr3L 12922012 intergenic not near genes chr3L 12924769 intergenic not near genes chr3L_10_12920001 chr3L_12920001 RAL-307_100b 2350 chr3L 12919261 12919269 chr3L 12924760 12924777 Rt1c 18 5504 37.5 11.0 24.2 0.7 5516 chr3L 12919261 intergenic not near genes chr3L 12922019 intergenic not near genes chr3L 12924777 intergenic not near genes chr3L_18_12920001 chr3L_12920001 RAL-307_100b 2351 chr3L 12955104 12955148 chr3L 12955205 12955249 41 100 19.0 14.0 16.5 2.3 145 chr3L 12955104 intergenic CG10752 - chr3L 12955176 intergenic not near genes chr3L 12955249 intergenic not near genes chr3L_41_12955001 chr3L_12955001 RAL-307_100b 2352 chr3L 12955149 12955162 chr3L 12955204 12955248 15 93 14.0 13.0 13.5 1.0 99 chr3L 12955149 intergenic not near genes chr3L 12955198 intergenic not near genes chr3L 12955248 intergenic not near genes chr3L_15_12955001 chr3L_12955001 RAL-307_100b 2353 chr3L 12957772 12957805 chr3L 12962268 12962312 copia 27 4504 17.0 19.0 18.0 1.4 4540 chr3L 12957772 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962312 intergenic not near genes chr3L_27_12960001 chr3L_12960001 RAL-307_100b 2354 chr3L 12957806 12957817 chr3L 12962267 12962307 copia 17 4499 11.0 18.5 14.8 1.1 4501 chr3L 12957806 intergenic not near genes chr3L 12960056 intergenic not near genes chr3L 12962307 intergenic not near genes chr3L_17_12960001 chr3L_12960001 RAL-307_100b 2355 chr3L 12978731 12978792 chr3L 12978835 12978896 34 101 10.0 1.0 5.5 5.2 165 chr3L 12978731 intergenic not near genes chr3L 12978814 intergenic not near genes chr3L 12978896 intergenic not near genes chr3L_34_12975001 chr3L_12975001 RAL-307_100b 2356 chr3L 12980493 12980553 chr3L 12980606 12980671 34 113 13.5 0.5 7.0 4.2 178 chr3L 12980493 intergenic not near genes chr3L 12980582 intergenic not near genes chr3L 12980671 intergenic not near genes chr3L_34_12980001 chr3L_12980001 RAL-307_100b 2357 chr3L 12998051 12998103 chr3L 12998378 12998392 54 326 14.0 17.0 15.5 3.3 341 chr3L 12998051 intergenic not near genes chr3L 12998222 intergenic not near genes chr3L 12998392 intergenic not near genes chr3L_54_12995001 chr3L_12995001 RAL-307_100b 2358 chr3L 13007668 13007671 chr3L 13007772 13007775 6 104 47.0 10.5 28.8 0.2 107 chr3L 13007668 exon CG11263 + chr3L 13007722 3` UTR CG11263 + chr3L 13007775 3` UTR CG11263 + chr3L_6_13005001 chr3L_13005001 RAL-307_100b 2359 chr3L 13007672 13007945 chr3L 13007771 13008063 82 109 15.0 10.0 12.5 6.1 391 chr3L 13007672 exon CG11263 + chr3L 13007868 3` UTR CG11263 + chr3L 13008063 intergenic CG11263 +,CG14117 + chr3L_82_13005001 chr3L_13005001 RAL-307_100b 2360 chr3L 13007949 13007956 chr3L 13008068 13008077 7 123 9.5 29.5 19.5 0.3 128 chr3L 13007949 intergenic CG11263 +,CG14117 + chr3L 13008013 intergenic CG11263 +,CG14117 + chr3L 13008077 intergenic CG11263 +,CG14117 + chr3L_7_13005001 chr3L_13005001 RAL-307_100b 2361 chr3L 13067515 13067573 chr3L 13067616 13067674 40 101 7.5 7.0 7.2 4.9 159 chr3L 13067515 intergenic not near genes chr3L 13067594 intergenic not near genes chr3L 13067674 intergenic not near genes chr3L_40_13065001 chr3L_13065001 RAL-307_100b 2362 chr3L 13260040 13260046 chr3L 13260226 13260232 8 185 17.0 13.0 15.0 0.5 192 chr3L 13260040 intron caps + chr3L 13260136 intron caps + chr3L 13260232 intron caps + chr3L_8_13260001 chr3L_13260001 RAL-307_100b 2363 chr3L 13260047 13260064 chr3L 13260224 13260248 10 184 17.0 12.5 14.8 0.6 201 chr3L 13260047 intron caps + chr3L 13260148 intron caps + chr3L 13260248 intron caps + chr3L_10_13260001 chr3L_13260001 RAL-307_100b 2364 chr3L 13260065 13260090 chr3L 13260220 13260276 13 179 13.5 9.0 11.2 1.1 211 chr3L 13260065 intron caps + chr3L 13260170 intron caps + chr3L 13260276 intron caps + chr3L_13_13260001 chr3L_13260001 RAL-307_100b 2365 chr3L 13267259 13267318 chr3L 13267397 13267440 30 135 10.5 1.0 5.8 4.4 181 chr3L 13267259 intron caps + chr3L 13267350 intron caps + chr3L 13267440 intron caps + chr3L_30_13265001 chr3L_13265001 RAL-307_100b 2366 chr3L 13310999 13311033 chr3L 13311099 13311121 26 100 27.0 18.0 22.5 1.1 122 chr3L 13310999 intergenic not near genes chr3L 13311060 intergenic not near genes chr3L 13311121 intergenic not near genes chr3L_26_13310001 chr3L_13310001 RAL-307_100b 2367 chr3L 13311034 13311053 chr3L 13311098 13311123 17 84 15.0 16.0 15.5 1.0 89 chr3L 13311034 intergenic not near genes chr3L 13311078 intergenic not near genes chr3L 13311123 intergenic not near genes chr3L_17_13310001 chr3L_13310001 RAL-307_100b 2368 chr3L 13315831 13315863 chr3L 13315943 13315975 12 112 8.5 14.5 11.5 1.0 144 chr3L 13315831 intergenic not near genes chr3L 13315903 intergenic not near genes chr3L 13315975 intergenic not near genes chr3L_12_13315001 chr3L_13315001 RAL-307_100b 2369 chr3L 13361936 13361990 chr3L 13362055 13362109 41 116 11.5 14.0 12.8 3.0 173 chr3L 13361936 intergenic not near genes chr3L 13362022 intergenic not near genes chr3L 13362109 intergenic not near genes chr3L_41_13360001 chr3L_13360001 RAL-307_100b 2370 chr3L 13365023 13365048 chr3L 13365126 13365131 12 101 26.0 0.5 13.2 0.8 108 chr3L 13365023 intergenic not near genes chr3L 13365077 intergenic not near genes chr3L 13365131 intergenic not near genes chr3L_12_13365001 chr3L_13365001 RAL-307_100b 2371 chr3L 13374223 13374278 chr3L 13374335 13374392 51 112 14.5 13.5 14.0 3.4 169 chr3L 13374223 intergenic not near genes chr3L 13374308 intergenic not near genes chr3L 13374392 intergenic not near genes chr3L_51_13370001 chr3L_13370001 RAL-307_100b 2372 chr3L 13379666 13379673 chr3L 13379861 13379868 5 195 20.0 0.0 10.0 0.5 202 chr3L 13379666 intron CG14111 + chr3L 13379767 intron CG14111 + chr3L 13379868 intron CG14111 + chr3L_5_13375001 chr3L_13375001 RAL-307_100b 2373 chr3L 13392741 13392761 chr3L 13392849 13392869 16 108 29.5 0.0 14.8 1.0 128 chr3L 13392741 intergenic not near genes chr3L 13392805 intergenic not near genes chr3L 13392869 intergenic not near genes chr3L_16_13390001 chr3L_13390001 RAL-307_100b 2374 chr3L 13396041 13396077 chr3L 13396143 13396179 6 102 14.5 0.0 7.2 0.7 138 chr3L 13396041 intergenic sens - chr3L 13396110 intergenic sens - chr3L 13396179 intergenic sens - chr3L_6_13395001 chr3L_13395001 RAL-307_100b 2375 chr3L 13452640 13452682 chr3L 13452753 13452795 35 111 0.0 17.0 8.5 3.7 155 chr3L 13452640 intron CG10738 + chr3L 13452718 intron CG10738 + chr3L 13452795 intron CG10738 + chr3L_35_13450001 chr3L_13450001 RAL-307_100b 2376 chr3L 13455728 13455781 chr3L 13455908 13455961 47 176 13.5 11.5 12.5 3.5 233 chr3L 13455728 intron CG10738 + chr3L 13455844 intron CG10738 + chr3L 13455961 intron CG10738 + chr3L_47_13455001 chr3L_13455001 RAL-307_100b 2377 chr3L 13525135 13525144 chr3L 13532956 13532965 roo 7 7821 38.5 18.5 28.5 0.2 7830 chr3L 13525135 intergenic not near genes chr3L 13529050 intergenic not near genes chr3L 13532965 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-307_100b 2378 chr3L 13525145 13525185 chr3L 13532955 13533006 roo 35 7819 18.5 18.5 18.5 1.8 7861 chr3L 13525145 intergenic not near genes chr3L 13529076 intergenic not near genes chr3L 13533006 intergenic not near genes chr3L_35_13525001 chr3L_13525001 RAL-307_100b 2379 chr3L 13535878 13535938 chr3L 13535979 13536009 56 97 15.0 11.5 13.2 3.9 131 chr3L 13535878 intergenic not near genes chr3L 13535944 intergenic not near genes chr3L 13536009 intergenic not near genes chr3L_56_13535001 chr3L_13535001 RAL-307_100b 2380 chr3L 13559940 13559965 chr3L 13560051 13560076 29 110 29.0 18.5 23.8 1.2 136 chr3L 13559940 intron bru-3 - chr3L 13560008 intron bru-3 - chr3L 13560076 intron bru-3 - chr3L_29_13560001 chr3L_13560001 RAL-307_100b 2381 chr3L 13559966 13559998 chr3L 13560047 13560088 38 105 13.5 15.5 14.5 2.5 122 chr3L 13559966 intron bru-3 - chr3L 13560027 intron bru-3 - chr3L 13560088 intron bru-3 - chr3L_38_13560001 chr3L_13560001 RAL-307_100b 2382 chr3L 13574611 13574618 chr3L 13580134 13580149 Rt1c 8 5533 34.5 19.0 26.8 0.3 5538 chr3L 13574611 intron bru-3 - chr3L 13577380 intron bru-3 - chr3L 13580149 intron bru-3 - chr3L_8_13575001 chr3L_13575001 RAL-307_100b 2383 chr3L 13598190 13598228 chr3L 13598292 13598293 6 91 22.0 1.5 11.8 0.5 103 chr3L 13598190 intron bru-3 - chr3L 13598242 intron bru-3 - chr3L 13598293 intron bru-3 - chr3L_6_13595001 chr3L_13595001 RAL-307_100b 2384 chr3L 13610177 13610226 chr3L 13610299 13610348 37 119 12.0 15.5 13.8 2.5 171 chr3L 13610177 intron bru-3 - chr3L 13610262 intron bru-3 - chr3L 13610348 intron bru-3 - chr3L_37_13610001 chr3L_13610001 RAL-307_100b 2385 chr3L 13740009 13740054 chr3L 13740127 13740160 21 114 9.0 21.5 15.2 1.3 151 chr3L 13740009 intron bru-3 - chr3L 13740084 intron bru-3 - chr3L 13740160 intron bru-3 - chr3L_21_13740001 chr3L_13740001 RAL-307_100b 2386 chr3L 13745267 13745282 chr3L 13745381 13745396 11 113 18.5 0.0 9.2 1.1 129 chr3L 13745267 intron bru-3 - chr3L 13745332 intron bru-3 - chr3L 13745396 intron bru-3 - chr3L_11_13745001 chr3L_13745001 RAL-307_100b 2387 chr3L 13745283 13745299 chr3L 13745380 13745392 5 106 13.5 0.0 6.8 0.6 109 chr3L 13745283 intron bru-3 - chr3L 13745338 intron bru-3 - chr3L 13745392 intron bru-3 - chr3L_5_13745001 chr3L_13745001 RAL-307_100b 2388 chr3L 13769003 13769035 chr3L 13769108 13769146 28 110 0.0 25.0 12.5 2.1 143 chr3L 13769003 intron bru-3 - chr3L 13769074 intron bru-3 - chr3L 13769146 intron bru-3 - chr3L_28_13765001 chr3L_13765001 RAL-307_100b 2389 chr3L 13804519 13804573 chr3L 13822830 13822884 roo 47 18310 11.0 10.5 10.8 4.0 18365 chr3L 13804519 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822884 intergenic not near genes chr3L_47_13810001 chr3L_13810001 RAL-307_100b 2390 chr3L 13823840 13823854 chr3L 13824034 13824048 15 194 16.0 12.5 14.2 1.0 208 chr3L 13823840 intergenic not near genes chr3L 13823944 intergenic not near genes chr3L 13824048 intergenic not near genes chr3L_15_13820001 chr3L_13820001 RAL-307_100b 2391 chr3L 13823859 13823886 chr3L 13824033 13824080 24 190 6.5 12.5 9.5 2.3 221 chr3L 13823859 intergenic not near genes chr3L 13823970 intergenic not near genes chr3L 13824080 intergenic not near genes chr3L_24_13820001 chr3L_13820001 RAL-307_100b 2392 chr3L 13828674 13828720 chr3L 13828775 13828821 42 99 14.5 22.5 18.5 2.2 147 chr3L 13828674 intergenic not near genes chr3L 13828748 intergenic not near genes chr3L 13828821 intergenic not near genes chr3L_42_13825001 chr3L_13825001 RAL-307_100b 2393 chr3L 13841133 13841162 chr3L 13841245 13841274 18 111 14.0 12.5 13.2 1.3 141 chr3L 13841133 3` UTR CG8757 - chr3L 13841204 3` UTR CG8757 - chr3L 13841274 exon CG8757 - chr3L_18_13840001 chr3L_13840001 RAL-307_100b 2394 chr3L 13884362 13884387 chr3L 13884478 13884503 13 115 15.0 14.0 14.5 0.8 141 chr3L 13884362 intron dysc - chr3L 13884432 intron dysc - chr3L 13884503 intron dysc - chr3L_13_13880001 chr3L_13880001 RAL-307_100b 2395 chr3L 13993984 13994004 chr3L 13994089 13994089 6 102 16.5 9.0 12.8 0.4 105 chr3L 13993984 intergenic 26-29-p + chr3L 13994036 intergenic 26-29-p + chr3L 13994089 intergenic 26-29-p + chr3L_6_13990001 chr3L_13990001 RAL-307_100b 2396 chr3L 14090621 14090678 chr3L 14090767 14090809 17 132 0.0 0.5 0.2 14.2 188 chr3L 14090621 intergenic not near genes chr3L 14090715 intergenic not near genes chr3L 14090809 intergenic not near genes chr3L_17_14090001 chr3L_14090001 RAL-307_100b 2397 chr3L 14092716 14092744 chr3L 14092824 14092846 17 107 15.0 0.5 7.8 1.9 130 chr3L 14092716 intergenic not near genes chr3L 14092781 intergenic not near genes chr3L 14092846 intergenic not near genes chr3L_17_14090001 chr3L_14090001 RAL-307_100b 2398 chr3L 14136806 14136854 chr3L 14136951 14136985 16 144 0.0 8.0 4.0 3.2 179 chr3L 14136806 intergenic not near genes chr3L 14136896 intergenic not near genes chr3L 14136985 intergenic not near genes chr3L_16_14135001 chr3L_14135001 RAL-307_100b 2399 chr3L 14141389 14141408 chr3L 14141501 14141520 7 112 12.0 0.0 6.0 1.0 131 chr3L 14141389 intergenic not near genes chr3L 14141454 intergenic not near genes chr3L 14141520 intergenic not near genes chr3L_7_14140001 chr3L_14140001 RAL-307_100b 2400 chr3L 5161877 5161879 chr3L 14159388 14159390 5 8997511 58.0 21.0 39.5 0.1 8997513 chr3L 5161877 intron shep - chr3L 9660634 intron fry - chr3L 14159390 intergenic not near genes chr3L_5_9660001 chr3L_9660001 RAL-307_100b 2401 chr3L 14185132 14185188 chr3L 14185233 14185289 43 99 10.5 14.0 12.2 3.3 157 chr3L 14185132 intergenic not near genes chr3L 14185210 intergenic not near genes chr3L 14185289 intergenic not near genes chr3L_43_14185001 chr3L_14185001 RAL-307_100b 2402 chr3L 14194698 14194741 chr3L 14194799 14194835 41 100 13.5 11.5 12.5 3.0 137 chr3L 14194698 intron nuf + chr3L 14194766 intron nuf + chr3L 14194835 intron nuf + chr3L_41_14190001 chr3L_14190001 RAL-307_100b 2403 chr3L 14196405 14196411 chr3L 14196515 14196521 7 110 33.0 24.0 28.5 0.2 116 chr3L 14196405 intron nuf + chr3L 14196463 intron nuf + chr3L 14196521 intron nuf + chr3L_7_14195001 chr3L_14195001 RAL-307_100b 2404 chr3L 14196412 14196446 chr3L 14196508 14196544 42 107 14.5 20.5 17.5 2.3 132 chr3L 14196412 intron nuf + chr3L 14196478 intron nuf + chr3L 14196544 intron nuf + chr3L_42_14195001 chr3L_14195001 RAL-307_100b 2405 chr3L 14208993 14209010 chr3L 20563596 20563598 4 6354596 26.0 41.5 33.8 0.1 6354605 chr3L 14208993 intron nuf + chr3L 17386296 exon CG13731 - chr3L 20563598 intergenic not near genes chr3L_4_17385001 chr3L_17385001 RAL-307_100b 2406 chr3L 14234851 14234856 chr3L 14234954 14234959 7 103 25.5 12.0 18.8 0.4 108 chr3L 14234851 intergenic CG34244 -,CG7924 + chr3L 14234905 intergenic CG34244 -,CG7924 + chr3L 14234959 intergenic CG34244 -,CG7924 + chr3L_7_14230001 chr3L_14230001 RAL-307_100b 2407 chr3L 14239963 14240007 chr3L 14240085 14240129 35 120 8.0 15.0 11.5 2.8 166 chr3L 14239963 intergenic not near genes chr3L 14240046 intergenic not near genes chr3L 14240129 intergenic not near genes chr3L_35_14240001 chr3L_14240001 RAL-307_100b 2408 chr3L 14245550 14245551 chr3L 14245668 14245670 4 119 52.5 14.5 33.5 0.1 120 chr3L 14245550 3` UTR CR44561 - chr3L 14245610 3` UTR CR44561 - chr3L 14245670 3` UTR CR44561 - chr3L_4_14245001 chr3L_14245001 RAL-307_100b 2409 chr3L 14245553 14245557 chr3L 14245661 14245676 5 117 48.5 12.5 30.5 0.2 123 chr3L 14245553 3` UTR CR44561 - chr3L 14245614 3` UTR CR44561 - chr3L 14245676 3` UTR CR44561 - chr3L_5_14245001 chr3L_14245001 RAL-307_100b 2410 chr3L 14245558 14245594 chr3L 14245660 14245703 1360 29 114 16.0 11.0 13.5 2.0 145 chr3L 14245558 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245703 intergenic CR44561 -,CR44560 + chr3L_29_14245001 chr3L_14245001 RAL-307_100b 2411 chr3L 14267391 14267405 chr3L 14271821 14271835 F-element 10 4433 15.0 0.0 7.5 1.2 4444 chr3L 14267391 intergenic not near genes chr3L 14269613 intergenic not near genes chr3L 14271835 intergenic not near genes chr3L_10_14265001 chr3L_14265001 RAL-307_100b 2412 chr3L 14295956 14296011 chr3L 14296467 14296481 roo 43 502 15.5 20.0 17.8 2.3 525 chr3L 14295956 intron fz + chr3L 14296218 intron fz + chr3L 14296481 intron fz + chr3L_43_14295001 chr3L_14295001 RAL-307_100b 2413 chr3L 14312008 14312024 chr3L 14316836 14316843 X-element 12 4829 24.5 17.0 20.8 0.6 4835 chr3L 14312008 exon fz + chr3L 14314426 intron fz + chr3L 14316843 intron fz + chr3L_12_14310001 chr3L_14310001 RAL-307_100b 2414 chr3L 14312025 14312055 chr3L 14316833 14316885 X-element 23 4821 14.5 16.0 15.2 1.4 4860 chr3L 14312025 exon fz + chr3L 14314455 intron fz + chr3L 14316885 intron fz + chr3L_23_14310001 chr3L_14310001 RAL-307_100b 2415 chr3L 14341415 14341437 chr3L 14341575 14341597 17 160 0.0 14.5 7.2 2.1 182 chr3L 14341415 intron fz + chr3L 14341506 intron fz + chr3L 14341597 intron fz + chr3L_17_14340001 chr3L_14340001 RAL-307_100b 2416 chr3L 14356497 14356505 chr3L 14356602 14356610 9 104 33.0 13.0 23.0 0.4 113 chr3L 14356497 intron fz + chr3L 14356554 intron fz + chr3L 14356610 intron fz + chr3L_9_14355001 chr3L_14355001 RAL-307_100b 2417 chr3L 14356506 14356553 chr3L 14356599 14356658 50 101 13.0 11.5 12.2 3.8 152 chr3L 14356506 intron fz + chr3L 14356582 intron fz + chr3L 14356658 intron fz + chr3L_50_14355001 chr3L_14355001 RAL-307_100b 2418 chr3L 14411838 14411896 chr3L 14411942 14412000 60 103 6.5 9.5 8.0 6.7 162 chr3L 14411838 intron CG3919 + chr3L 14411919 intron CG3919 + chr3L 14412000 intron CG3919 + chr3L_60_14410001 chr3L_14410001 RAL-307_100b 2419 chr3L 14437858 14437911 chr3L 14437977 14438030 43 118 12.5 14.5 13.5 3.0 172 chr3L 14437858 intron bbg - chr3L 14437944 intron bbg - chr3L 14438030 intron bbg - chr3L_43_14435001 chr3L_14435001 RAL-307_100b 2420 chr3L 14462877 14462898 chr3L 14462989 14463011 11 113 8.0 15.5 11.8 0.9 134 chr3L 14462877 intron bbg - chr3L 14462944 intron bbg - chr3L 14463011 intron bbg - chr3L_11_14460001 chr3L_14460001 RAL-307_100b 2421 chr3L 14462900 14462907 chr3L 14462985 14463020 8 109 8.0 12.5 10.2 0.7 120 chr3L 14462900 intron bbg - chr3L 14462960 intron bbg - chr3L 14463020 intron bbg - chr3L_8_14460001 chr3L_14460001 RAL-307_100b 2422 chr3L 14468429 14468475 chr3L 14473655 14473701 copia 38 5229 16.0 12.0 14.0 2.5 5272 chr3L 14468429 intron bbg - chr3L 14471065 intron bbg - chr3L 14473701 intron bbg - chr3L_38_14470001 chr3L_14470001 RAL-307_100b 2423 chr3L 14485990 14486049 chr3L 14486096 14486155 46 104 9.5 10.0 9.8 4.3 165 chr3L 14485990 intron bbg - chr3L 14486072 intron bbg - chr3L 14486155 intron bbg - chr3L_46_14485001 chr3L_14485001 RAL-307_100b 2424 chr3L 14522074 14522130 chr3L 14522198 14522254 44 122 9.5 12.0 10.8 3.7 180 chr3L 14522074 intron bbg - chr3L 14522164 intron bbg - chr3L 14522254 intron bbg - chr3L_44_14520001 chr3L_14520001 RAL-307_100b 2425 chr3L 14546766 14546817 chr3L 14546872 14546943 13 124 0.0 0.0 0.0 13.0 177 chr3L 14546766 intron CG9238 - chr3L 14546854 intron CG9238 - chr3L 14546943 intron CG9238 - chr3L_13_14545001 chr3L_14545001 RAL-307_100b 2426 chr3L 14576174 14576178 chr3L 14576322 14576331 4 152 0.0 29.5 14.8 0.3 157 chr3L 14576174 intergenic not near genes chr3L 14576252 intergenic not near genes chr3L 14576331 intergenic not near genes chr3L_4_14575001 chr3L_14575001 RAL-307_100b 2427 chr3L 14576180 14576193 chr3L 14576321 14576346 13 151 0.0 29.0 14.5 0.8 166 chr3L 14576180 intergenic not near genes chr3L 14576263 intergenic not near genes chr3L 14576346 intergenic not near genes chr3L_13_14575001 chr3L_14575001 RAL-307_100b 2428 chr3L 14603061 14603074 chr3L 14603163 14603168 5 100 0.0 19.0 9.5 0.5 107 chr3L 14603061 intergenic not near genes chr3L 14603114 intergenic not near genes chr3L 14603168 intergenic not near genes chr3L_5_14600001 chr3L_14600001 RAL-307_100b 2429 chr3L 14652612 14652669 chr3L 14652716 14652773 52 101 21.5 22.0 21.8 2.3 161 chr3L 14652612 intron dlp + chr3L 14652692 intron dlp + chr3L 14652773 intron dlp + chr3L_52_14650001 chr3L_14650001 RAL-307_100b 2430 chr3L 14714667 14714717 chr3L 14714771 14714771 29 98 12.0 10.5 11.2 2.4 104 chr3L 14714667 intron ome + chr3L 14714719 intron ome + chr3L 14714771 intron ome + chr3L_29_14710001 chr3L_14710001 RAL-307_100b 2431 chr3L 14721160 14721209 chr3L 14723028 14723066 Rt1c 36 1861 20.0 14.0 17.0 2.0 1906 chr3L 14721160 intron ome + chr3L 14722113 intron ome + chr3L 14723066 intron ome + chr3L_36_14720001 chr3L_14720001 RAL-307_100b 2432 chr3L 14725587 14725618 chr3L 14728606 14728637 Doc 16 3019 12.0 20.5 16.2 0.9 3050 chr3L 14725587 intron ome + chr3L 14727112 intron ome + chr3L 14728637 intron ome + chr3L_16_14725001 chr3L_14725001 RAL-307_100b 2433 chr3L 14825138 14825159 chr3L 14832890 14832911 Stalker2 10 7752 3.5 14.0 8.8 1.0 7773 chr3L 14825138 intron CG17839 + chr3L 14829024 intron CG17839 + chr3L 14832911 intron CG17839 + chr3L_10_14825001 chr3L_14825001 RAL-307_100b 2434 chr3L 14913876 14913932 chr3L 14913978 14914034 61 98 13.5 14.5 14.0 4.1 158 chr3L 14913876 intron DCX-EMAP + chr3L 14913955 intron DCX-EMAP + chr3L 14914034 intron DCX-EMAP + chr3L_61_14910001 chr3L_14910001 RAL-307_100b 2435 chr3L 14970738 14970764 chr3L 14971074 14971100 F-element 12 334 8.0 6.5 7.2 1.5 362 chr3L 14970738 intergenic Tom + chr3L 14970919 intergenic not near genes chr3L 14971100 intergenic not near genes chr3L_12_14970001 chr3L_14970001 RAL-307_100b 2436 chr3L 14974750 14974809 chr3L 14974861 14974921 62 108 7.0 13.5 10.2 5.5 171 chr3L 14974750 intergenic Ocho + chr3L 14974836 intergenic Ocho + chr3L 14974921 5` UTR Ocho + chr3L_62_14970001 chr3L_14970001 RAL-307_100b 2437 chr3L 14995890 14995947 chr3L 14996016 14996054 68 123 8.0 10.0 9.0 6.8 164 chr3L 14995890 intron Zip71B + chr3L 14995972 intron Zip71B + chr3L 14996054 intron Zip71B + chr3L_68_14995001 chr3L_14995001 RAL-307_100b 2438 chr3L 15026677 15026686 chr3L 15026778 15026787 9 101 8.0 7.0 7.5 1.1 110 chr3L 15026677 intron Sytbeta - chr3L 15026732 intron Sytbeta - chr3L 15026787 intron Sytbeta - chr3L_9_15025001 chr3L_15025001 RAL-307_100b 2439 chr3L 15037396 15037457 chr3L 15037507 15037567 42 107 12.5 0.5 6.5 5.6 171 chr3L 15037396 intron Sytbeta - chr3L 15037482 intron Sytbeta - chr3L 15037567 intron Sytbeta - chr3L_42_15035001 chr3L_15035001 RAL-307_100b 2440 chr3L 15069795 15069808 chr3L 15069934 15069955 6 144 68.0 52.5 60.2 0.1 160 chr3L 15069795 exon cp309 - chr3L 15069875 intron cp309 - chr3L 15069955 exon cp309 - chr3L_6_15065001 chr3L_15065001 RAL-307_100b 2441 chr3L 15085024 15085082 chr3L 15086215 15086273 1360 35 1186 12.0 12.5 12.2 2.7 1249 chr3L 15085024 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086273 intron cp309 - chr3L_35_15085001 chr3L_15085001 RAL-307_100b 2442 chr3L 15094947 15094963 chr3L 15095067 15095083 11 120 21.0 15.0 18.0 0.6 136 chr3L 15094947 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095015 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095083 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_11_15095001 chr3L_15095001 RAL-307_100b 2443 chr3L 15146138 15146173 chr3L 15146240 15146287 12 106 0.0 13.5 6.8 1.5 149 chr3L 15146138 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146287 3` UTR Pex3 + chr3L_12_15145001 chr3L_15145001 RAL-307_100b 2444 chr3L 15165027 15165031 chr3L 15165151 15165155 4 124 14.5 0.0 7.2 0.5 128 chr3L 15165027 intergenic not near genes chr3L 15165091 intergenic not near genes chr3L 15165155 intergenic not near genes chr3L_4_15165001 chr3L_15165001 RAL-307_100b 2445 chr3L 15170773 15170828 chr3L 15170947 15170989 23 171 10.5 0.0 5.2 3.7 216 chr3L 15170773 intergenic not near genes chr3L 15170881 intergenic not near genes chr3L 15170989 intergenic not near genes chr3L_23_15170001 chr3L_15170001 RAL-307_100b 2446 chr3L 15192323 15192382 chr3L 15192776 15192790 47 447 12.5 20.0 16.2 2.7 467 chr3L 15192323 intergenic not near genes chr3L 15192556 intergenic not near genes chr3L 15192790 intergenic not near genes chr3L_47_15190001 chr3L_15190001 RAL-307_100b 2447 chr3L 15257407 15257446 chr3L 15257645 15257684 24 237 8.0 6.0 7.0 3.0 277 chr3L 15257407 intergenic not near genes chr3L 15257546 intergenic not near genes chr3L 15257684 intergenic not near genes chr3L_24_15255001 chr3L_15255001 RAL-307_100b 2448 chr3L 15295747 15295797 chr3L 15298615 15298665 gypsy5 35 2867 18.0 20.5 19.2 1.7 2918 chr3L 15295747 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298665 intergenic Best4 + chr3L_35_15295001 chr3L_15295001 RAL-307_100b 2449 chr3L 15329348 15329357 chr3L 15329463 15329472 5 115 30.5 17.5 24.0 0.2 124 chr3L 15329348 intergenic not near genes chr3L 15329410 intergenic not near genes chr3L 15329472 intergenic not near genes chr3L_5_15325001 chr3L_15325001 RAL-307_100b 2450 chr3L 15329360 15329399 chr3L 15329460 15329514 32 113 15.0 16.0 15.5 1.9 154 chr3L 15329360 intergenic not near genes chr3L 15329437 intergenic not near genes chr3L 15329514 intergenic not near genes chr3L_32_15325001 chr3L_15325001 RAL-307_100b 2451 chr3L 15349590 15349640 chr3L 15349844 15349894 27 253 7.0 6.5 6.8 3.5 304 chr3L 15349590 intergenic not near genes chr3L 15349742 intergenic not near genes chr3L 15349894 intergenic not near genes chr3L_27_15345001 chr3L_15345001 RAL-307_100b 2452 chr3L 15366660 15366693 chr3L 15366783 15366831 37 137 21.0 15.5 18.2 1.9 171 chr3L 15366660 intergenic not near genes chr3L 15366746 intergenic not near genes chr3L 15366831 intergenic not near genes chr3L_37_15365001 chr3L_15365001 RAL-307_100b 2453 chr3L 15405994 15406054 chr3L 15406101 15406144 40 101 5.0 12.5 8.8 4.1 150 chr3L 15405994 intergenic not near genes chr3L 15406069 intergenic not near genes chr3L 15406144 intergenic not near genes chr3L_40_15405001 chr3L_15405001 RAL-307_100b 2454 chr3L 15423739 15423783 chr3L 15426608 15426649 opus 27 2866 15.5 7.0 11.2 2.2 2910 chr3L 15423739 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426649 intergenic not near genes chr3L_27_15425001 chr3L_15425001 RAL-307_100b 2455 chr3L 15444630 15444632 chr3L 15444749 15444751 4 119 41.5 16.0 28.8 0.1 121 chr3L 15444630 intergenic not near genes chr3L 15444690 intergenic not near genes chr3L 15444751 intergenic not near genes chr3L_4_15440001 chr3L_15440001 RAL-307_100b 2456 chr3L 15444642 15444648 chr3L 15444745 15444754 11 112 33.5 15.0 24.2 0.4 112 chr3L 15444642 intergenic not near genes chr3L 15444698 intergenic not near genes chr3L 15444754 intergenic not near genes chr3L_11_15440001 chr3L_15440001 RAL-307_100b 2457 chr3L 15444649 15444683 chr3L 15444743 15444802 48 113 17.5 15.0 16.2 2.8 153 chr3L 15444649 intergenic not near genes chr3L 15444726 intergenic not near genes chr3L 15444802 intergenic not near genes chr3L_48_15440001 chr3L_15440001 RAL-307_100b 2458 chr3L 15466012 15466139 chr3L 15466119 15466260 43 111 0.0 0.0 0.0 43.0 248 chr3L 15466012 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466260 intergenic not near genes chr3L_43_15465001 chr3L_15465001 RAL-307_100b 2459 chr3L 15466494 15466502 chr3L 15466603 15466611 4 109 28.0 14.0 21.0 0.2 117 chr3L 15466494 intergenic not near genes chr3L 15466552 intergenic not near genes chr3L 15466611 intergenic not near genes chr3L_4_15465001 chr3L_15465001 RAL-307_100b 2460 chr3L 15466503 15466549 chr3L 15466602 15466658 34 107 10.5 14.0 12.2 2.6 155 chr3L 15466503 intergenic not near genes chr3L 15466580 intergenic not near genes chr3L 15466658 intergenic not near genes chr3L_34_15465001 chr3L_15465001 RAL-307_100b 2461 chr3L 15470943 15470997 chr3L 15471044 15471098 42 97 13.0 13.5 13.2 3.0 155 chr3L 15470943 intergenic not near genes chr3L 15471020 intergenic not near genes chr3L 15471098 intergenic not near genes chr3L_42_15470001 chr3L_15470001 RAL-307_100b 2462 chr3L 15493290 15493346 chr3L 15493410 15493466 12 120 7.0 0.0 3.5 2.7 176 chr3L 15493290 exon CG12355 - chr3L 15493378 intron CG12355 - chr3L 15493466 intron CG12355 - chr3L_12_15490001 chr3L_15490001 RAL-307_100b 2463 chr3L 15600143 15600195 chr3L 15600253 15600321 22 120 19.0 0.0 9.5 2.1 178 chr3L 15600143 intron RhoGAP71E + chr3L 15600232 intron RhoGAP71E + chr3L 15600321 intron RhoGAP71E + chr3L_22_15600001 chr3L_15600001 RAL-307_100b 2464 chr3L 15615911 15615957 chr3L 15616032 15616058 37 120 17.0 14.5 15.8 2.2 147 chr3L 15615911 intron comm3 - chr3L 15615984 intron comm3 - chr3L 15616058 intron comm3 - chr3L_37_15615001 chr3L_15615001 RAL-307_100b 2465 chr3L 15633156 15633197 chr3L 15633261 15633277 31 102 15.5 2.0 8.8 3.2 121 chr3L 15633156 intron comm3 - chr3L 15633216 intron comm3 - chr3L 15633277 intron comm3 - chr3L_31_15630001 chr3L_15630001 RAL-307_100b 2466 chr3L 15633200 15633216 chr3L 15633305 15633321 6 105 9.0 12.0 10.5 0.5 121 chr3L 15633200 intron comm3 - chr3L 15633260 intron comm3 - chr3L 15633321 intron comm3 - chr3L_6_15630001 chr3L_15630001 RAL-307_100b 2467 chr3L 15640158 15640169 chr3L 15640271 15640271 9 113 32.0 17.5 24.8 0.3 113 chr3L 15640158 intron comm3 - chr3L 15640214 intron comm3 - chr3L 15640271 intron comm3 - chr3L_9_15640001 chr3L_15640001 RAL-307_100b 2468 chr3L 15640170 15640216 chr3L 15640269 15640313 52 109 13.5 15.0 14.2 3.4 143 chr3L 15640170 intron comm3 - chr3L 15640242 intron comm3 - chr3L 15640313 intron comm3 - chr3L_52_15640001 chr3L_15640001 RAL-307_100b 2469 chr3L 15691391 15691444 chr3L 15691498 15691503 46 94 0.5 14.5 7.5 5.4 112 chr3L 15691391 intron CG34451 - chr3L 15691447 intron CG34451 - chr3L 15691503 intron CG34451 - chr3L_46_15690001 chr3L_15690001 RAL-307_100b 2470 chr3L 15756855 15756874 chr3L 15756963 15756977 18 105 40.5 2.5 21.5 0.8 122 chr3L 15756855 intergenic not near genes chr3L 15756916 intergenic not near genes chr3L 15756977 intergenic not near genes chr3L_18_15755001 chr3L_15755001 RAL-307_100b 2471 chr3L 15756875 15756910 chr3L 15756962 15756976 18 93 15.5 2.5 9.0 1.8 101 chr3L 15756875 intergenic not near genes chr3L 15756926 intergenic not near genes chr3L 15756976 intergenic not near genes chr3L_18_15755001 chr3L_15755001 RAL-307_100b 2472 chr3L 15832231 15832250 chr3L 15832337 15832356 18 105 30.5 13.0 21.8 0.8 125 chr3L 15832231 intergenic dbo +,CG12713 + chr3L 15832294 intergenic CG12713 +,dbo + chr3L 15832356 intergenic CG12713 +,dbo + chr3L_18_15830001 chr3L_15830001 RAL-307_100b 2473 chr3L 15832251 15832286 chr3L 15832336 15832372 42 98 15.0 13.0 14.0 2.8 121 chr3L 15832251 intergenic CG12713 +,dbo + chr3L 15832312 intergenic CG12713 +,dbo + chr3L 15832372 intergenic CG12713 +,dbo + chr3L_42_15830001 chr3L_15830001 RAL-307_100b 2474 chr3L 15871567 15871615 chr3L 15871676 15871724 28 107 13.5 6.5 10.0 2.5 157 chr3L 15871567 intron pHCl - chr3L 15871646 intron pHCl - chr3L 15871724 intron pHCl - chr3L_28_15870001 chr3L_15870001 RAL-307_100b 2475 chr3L 15899214 15899220 chr3L 15899794 15899812 jockey 4 586 30.0 17.0 23.5 0.2 598 chr3L 15899214 intergenic pHCl - chr3L 15899513 intergenic pHCl - chr3L 15899812 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-307_100b 2476 chr3L 15899223 15899263 chr3L 15899791 15899817 jockey 30 574 9.0 16.0 12.5 2.2 594 chr3L 15899223 intergenic pHCl - chr3L 15899520 intergenic pHCl - chr3L 15899817 intergenic sff - chr3L_30_15895001 chr3L_15895001 RAL-307_100b 2477 chr3L 15929174 15929226 chr3L 15938342 15938398 roo 7 9167 0.0 14.5 7.2 0.9 9224 chr3L 15929174 intron Pka-C3 - chr3L 15933786 intron Pka-C3 - chr3L 15938398 intron Pka-C3 - chr3L_7_15930001 chr3L_15930001 RAL-307_100b 2478 chr3L 15989210 15989227 chr3L 15989318 15989335 15 107 9.5 14.5 12.0 1.2 125 chr3L 15989210 intron Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989335 intron Hip14 + chr3L_15_15985001 chr3L_15985001 RAL-307_100b 2479 chr3L 16070716 16070761 chr3L 16070818 16070863 28 100 10.5 17.5 14.0 1.9 147 chr3L 16070716 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070863 exon Mbs + chr3L_28_16070001 chr3L_16070001 RAL-307_100b 2480 chr3L 16145745 16145786 chr3L 16145877 16145918 26 129 0.5 16.0 8.2 2.8 173 chr3L 16145745 intron CG5151 - chr3L 16145832 intron CG5151 - chr3L 16145918 intron CG5151 - chr3L_26_16145001 chr3L_16145001 RAL-307_100b 2481 chr3L 16158808 16158837 chr3L 16158893 16158947 27 107 2.5 12.0 7.2 3.3 139 chr3L 16158808 intron CG5151 - chr3L 16158878 intron CG5151 - chr3L 16158947 intron CG5151 - chr3L_27_16155001 chr3L_16155001 RAL-307_100b 2482 chr3L 16184084 16184091 chr3L 16188928 16188935 X-element 4 4844 33.0 18.5 25.8 0.1 4851 chr3L 16184084 intergenic not near genes chr3L 16186510 intergenic not near genes chr3L 16188935 intergenic not near genes chr3L_4_16185001 chr3L_16185001 RAL-307_100b 2483 chr3L 16184093 16184110 chr3L 16188925 16188954 X-element 13 4840 24.0 16.0 20.0 0.6 4861 chr3L 16184093 intergenic not near genes chr3L 16186524 intergenic not near genes chr3L 16188954 intergenic not near genes chr3L_13_16185001 chr3L_16185001 RAL-307_100b 2484 chr3L 16184111 16184136 chr3L 16188924 16188980 X-element 22 4841 13.5 16.0 14.8 1.4 4869 chr3L 16184111 intergenic not near genes chr3L 16186546 intergenic not near genes chr3L 16188980 intergenic not near genes chr3L_22_16185001 chr3L_16185001 RAL-307_100b 2485 chr3L 16221249 16221269 chr3L 16221365 16221385 15 114 26.5 9.0 17.8 0.8 136 chr3L 16221249 intergenic not near genes chr3L 16221317 intergenic not near genes chr3L 16221385 intergenic not near genes chr3L_15_16220001 chr3L_16220001 RAL-307_100b 2486 chr3L 16221270 16221294 chr3L 16221357 16221405 22 111 12.5 9.0 10.8 1.9 135 chr3L 16221270 intergenic not near genes chr3L 16221338 intergenic not near genes chr3L 16221405 intergenic not near genes chr3L_22_16220001 chr3L_16220001 RAL-307_100b 2487 chr3L 16252087 16252106 chr3L 16252196 16252256 26 143 21.0 13.5 17.2 1.4 169 chr3L 16252087 5` UTR CG13055 - chr3L 16252172 5` UTR CG13055 - chr3L 16252256 5` UTR CG13055 - chr3L_26_16250001 chr3L_16250001 RAL-307_100b 2488 chr3L 16443822 16443879 chr3L 16446187 16446244 Doc 70 2362 16.0 22.5 19.2 3.5 2422 chr3L 16443822 intron,intron CG33158 +,dsx-c73A - chr3L 16445033 intron,intron CG33158 +,dsx-c73A - chr3L 16446244 intron,intron CG33158 +,dsx-c73A - chr3L_70_16445001 chr3L_16445001 RAL-307_100b 2489 chr3L 16452981 16453021 chr3L 16453083 16453118 6 101 11.0 0.0 5.5 0.9 137 chr3L 16452981 intron CG33158 + chr3L 16453050 intron CG33158 + chr3L 16453118 intron CG33158 + chr3L_6_16450001 chr3L_16450001 RAL-307_100b 2490 chr3L 16457504 16457544 chr3L 16457625 16457664 20 119 16.0 10.0 13.0 1.4 160 chr3L 16457504 intron CG33158 + chr3L 16457584 intron CG33158 + chr3L 16457664 intron CG33158 + chr3L_20_16455001 chr3L_16455001 RAL-307_100b 2491 chr3L 16462715 16462764 chr3L 16462828 16462865 34 116 4.0 17.0 10.5 3.0 150 chr3L 16462715 intron CG33158 + chr3L 16462790 intron CG33158 + chr3L 16462865 intron CG33158 + chr3L_34_16460001 chr3L_16460001 RAL-307_100b 2492 chr3L 16493951 16494012 chr3L 16494493 16494533 jockey 65 538 17.0 19.0 18.0 3.4 582 chr3L 16493951 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494533 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_65_16490001 chr3L_16490001 RAL-307_100b 2493 chr3L 16503620 16503658 chr3L 16503722 16503760 25 99 8.0 26.0 17.0 1.4 140 chr3L 16503620 intron CG43373 - chr3L 16503690 intron CG43373 - chr3L 16503760 intron CG43373 - chr3L_25_16500001 chr3L_16500001 RAL-307_100b 2494 chr3L 16533540 16533572 chr3L 16533676 16533708 7 136 7.0 16.0 11.5 0.6 168 chr3L 16533540 intron CG43373 - chr3L 16533624 intron CG43373 - chr3L 16533708 intron CG43373 - chr3L_7_16530001 chr3L_16530001 RAL-307_100b 2495 chr3L 16533573 16533587 chr3L 16533674 16533723 14 130 6.5 14.5 10.5 1.2 150 chr3L 16533573 intron CG43373 - chr3L 16533648 intron CG43373 - chr3L 16533723 intron CG43373 - chr3L_14_16530001 chr3L_16530001 RAL-307_100b 2496 chr3L 16537826 16537861 chr3L 16537938 16537973 35 111 9.5 20.5 15.0 2.2 147 chr3L 16537826 intron CG43373 - chr3L 16537900 intron CG43373 - chr3L 16537973 intron CG43373 - chr3L_35_16535001 chr3L_16535001 RAL-307_100b 2497 chr3L 16537863 16537882 chr3L 16537933 16537970 14 104 8.0 18.0 13.0 1.0 107 chr3L 16537863 intron CG43373 - chr3L 16537916 intron CG43373 - chr3L 16537970 intron CG43373 - chr3L_14_16535001 chr3L_16535001 RAL-307_100b 2498 chr3L 16540029 16540061 chr3L 16540142 16540153 23 111 22.0 16.0 19.0 1.1 124 chr3L 16540029 intron CG43373 - chr3L 16540091 intron CG43373 - chr3L 16540153 intron CG43373 - chr3L_23_16540001 chr3L_16540001 RAL-307_100b 2499 chr3L 16540063 16540086 chr3L 16540140 16540187 17 110 12.0 16.0 14.0 1.1 124 chr3L 16540063 intron CG43373 - chr3L 16540125 intron CG43373 - chr3L 16540187 intron CG43373 - chr3L_17_16540001 chr3L_16540001 RAL-307_100b 2500 chr3L 16610658 16610718 chr3L 16610768 16610781 49 106 8.5 16.5 12.5 3.6 123 chr3L 16610658 intergenic Su(P) -,Prosbeta6 - chr3L 16610720 3` UTR Su(P) - chr3L 16610781 exon Su(P) - chr3L_49_16610001 chr3L_16610001 RAL-307_100b 2501 chr3L 16616487 16616539 chr3L 16621840 16621892 297 47 5347 17.0 11.5 14.2 3.1 5405 chr3L 16616487 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621892 3` UTR Abl - chr3L_47_16615001 chr3L_16615001 RAL-307_100b 2502 chr3L 16632201 16632261 chr3L 16632412 16632480 37 204 25.5 4.5 15.0 2.3 279 chr3L 16632201 intron Abl - chr3L 16632340 intron Abl - chr3L 16632480 intron Abl - chr3L_37_16630001 chr3L_16630001 RAL-307_100b 2503 chr3L 16643655 16643680 chr3L 16643732 16643787 30 104 12.0 15.0 13.5 2.1 132 chr3L 16643655 intron Abl - chr3L 16643721 intron Abl - chr3L 16643787 intron Abl - chr3L_30_16640001 chr3L_16640001 RAL-307_100b 2504 chr3L 16683998 16684043 chr3L 16689244 16689289 copia 27 5245 6.0 12.5 9.2 2.6 5291 chr3L 16683998 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689289 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_27_16685001 chr3L_16685001 RAL-307_100b 2505 chr3L 16746806 16746855 chr3L 16746920 16746938 49 105 19.0 15.0 17.0 2.7 132 chr3L 16746806 intergenic not near genes chr3L 16746872 intergenic not near genes chr3L 16746938 intergenic not near genes chr3L_49_16745001 chr3L_16745001 RAL-307_100b 2506 chr3L 16757621 16757668 chr3L 16757736 16757783 37 113 14.0 22.0 18.0 1.9 162 chr3L 16757621 intergenic not near genes chr3L 16757702 intergenic not near genes chr3L 16757783 intergenic not near genes chr3L_37_16755001 chr3L_16755001 RAL-307_100b 2507 chr3L 16760824 16760880 chr3L 16760984 16761043 41 159 6.5 12.5 9.5 3.9 219 chr3L 16760824 intergenic not near genes chr3L 16760934 intergenic not near genes chr3L 16761043 intergenic not near genes chr3L_41_16760001 chr3L_16760001 RAL-307_100b 2508 chr3L 16772472 16772513 chr3L 16772584 16772627 56 112 24.5 16.0 20.2 2.6 155 chr3L 16772472 intron Nrt + chr3L 16772550 intron Nrt + chr3L 16772627 intron Nrt + chr3L_56_16770001 chr3L_16770001 RAL-307_100b 2509 chr3L 16796383 16796442 chr3L 16796493 16796554 37 110 13.5 10.0 11.8 2.9 171 chr3L 16796383 intron CG9674 - chr3L 16796468 intron CG9674 - chr3L 16796554 intron CG9674 - chr3L_37_16795001 chr3L_16795001 RAL-307_100b 2510 chr3L 16802429 16802480 chr3L 16803590 16803651 62 1167 126.0 136.5 131.2 0.5 1222 chr3L 16802429 intron CG9674 - chr3L 16803040 intron CG9674 - chr3L 16803651 intron CG9674 - chr3L_62_16800001 chr3L_16800001 RAL-307_100b 2511 chr3L 16817331 16817364 chr3L 16817431 16817477 33 109 0.0 22.5 11.2 2.7 146 chr3L 16817331 intron,intron nudC +,CG13024 - chr3L 16817404 intron,intron nudC +,CG13024 - chr3L 16817477 intron,intron nudC +,CG13024 - chr3L_33_16815001 chr3L_16815001 RAL-307_100b 2512 chr3L 16818721 16818780 chr3L 16818822 16818881 69 98 15.0 14.0 14.5 4.5 160 chr3L 16818721 intron,intron nudC +,CG13024 - chr3L 16818801 intron,intron nudC +,CG13024 - chr3L 16818881 intron,intron nudC +,CG13024 - chr3L_69_16815001 chr3L_16815001 RAL-307_100b 2513 chr3L 16821275 16821288 chr3L 16821379 16821399 15 109 33.5 15.0 24.2 0.6 124 chr3L 16821275 intron CG13024 - chr3L 16821337 intron CG13024 - chr3L 16821399 intron CG13024 - chr3L_15_16820001 chr3L_16820001 RAL-307_100b 2514 chr3L 16826181 16826236 chr3L 16826487 16826542 51 302 15.0 16.0 15.5 3.1 361 chr3L 16826181 intron CG13024 - chr3L 16826362 intron CG13024 - chr3L 16826542 intron CG13024 - chr3L_51_16825001 chr3L_16825001 RAL-307_100b 2515 chr3L 16844999 16845019 chr3L 16845137 16845157 9 137 32.0 16.0 24.0 0.4 158 chr3L 16844999 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845078 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845157 intergenic CG9669 -,CG9715 + chr3L_9_16845001 chr3L_16845001 RAL-307_100b 2516 chr3L 16845021 16845044 chr3L 16845134 16845182 13 134 16.5 16.0 16.2 0.8 161 chr3L 16845021 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845102 intergenic CG9669 -,CG9715 + chr3L 16845182 intergenic CG9669 -,CG9715 + chr3L_13_16845001 chr3L_16845001 RAL-307_100b 2517 chr3L 16873312 16873352 chr3L 16873441 16873470 24 126 10.0 18.0 14.0 1.6 158 chr3L 16873312 intron Lmpt + chr3L 16873391 intron Lmpt + chr3L 16873470 intron Lmpt + chr3L_24_16870001 chr3L_16870001 RAL-307_100b 2518 chr3L 16876429 16876456 chr3L 16876539 16876553 16 101 32.0 8.0 20.0 0.8 124 chr3L 16876429 intron Lmpt + chr3L 16876491 intron Lmpt + chr3L 16876553 intron Lmpt + chr3L_16_16875001 chr3L_16875001 RAL-307_100b 2519 chr3L 16941380 16941411 chr3L 16941506 16941537 26 125 20.0 0.0 10.0 2.4 157 chr3L 16941380 intron Cpr73D - chr3L 16941458 intron Cpr73D - chr3L 16941537 intron Cpr73D - chr3L_26_16940001 chr3L_16940001 RAL-307_100b 2520 chr3L 16945705 16945761 chr3L 16954883 16954901 roo 54 9169 18.5 19.5 19.0 2.7 9196 chr3L 16945705 exon Obp73a + chr3L 16950303 intergenic not near genes chr3L 16954901 5` UTR Nc73EF + chr3L_54_16950001 chr3L_16950001 RAL-307_100b 2521 chr3L 17008440 17008446 chr3L 17008835 17008841 4 395 10.0 13.0 11.5 0.3 401 chr3L 17008440 intron CG3764 - chr3L 17008640 intron CG3764 - chr3L 17008841 intron CG3764 - chr3L_4_17005001 chr3L_17005001 RAL-307_100b 2522 chr3L 17008447 17008449 chr3L 17008832 17008844 7 392 10.0 11.5 10.8 0.6 397 chr3L 17008447 intron CG3764 - chr3L 17008646 intron CG3764 - chr3L 17008844 intron CG3764 - chr3L_7_17005001 chr3L_17005001 RAL-307_100b 2523 chr3L 17008453 17008524 chr3L 17008835 17008872 26 387 0.0 13.0 6.5 3.5 419 chr3L 17008453 intron CG3764 - chr3L 17008662 intron CG3764 - chr3L 17008872 intron CG3764 - chr3L_26_17005001 chr3L_17005001 RAL-307_100b 2524 chr3L 17034913 17034967 chr3L 17035126 17035170 G2 34 210 9.5 15.0 12.2 2.6 257 chr3L 17034913 intergenic not near genes chr3L 17035042 intergenic not near genes chr3L 17035170 intergenic beg + chr3L_34_17035001 chr3L_17035001 RAL-307_100b 2525 chr3L 17084982 17085034 chr3L 17094156 17094208 roo 38 9173 14.0 25.0 19.5 1.9 9226 chr3L 17084982 intron Rbp6 - chr3L 17089595 intron Rbp6 - chr3L 17094208 intron Rbp6 - chr3L_38_17085001 chr3L_17085001 RAL-307_100b 2526 chr3L 17120629 17120925 chr3L 17120730 17121021 81 97 18.5 14.0 16.2 4.7 392 chr3L 17120629 intron Rbp6 - chr3L 17120825 intron Rbp6 - chr3L 17121021 intron Rbp6 - chr3L_81_17120001 chr3L_17120001 RAL-307_100b 2527 chr3L 17120934 17120945 chr3L 17121004 17121040 18 75 12.0 31.0 21.5 0.8 106 chr3L 17120934 intron Rbp6 - chr3L 17120987 intron Rbp6 - chr3L 17121040 intron Rbp6 - chr3L_18_17120001 chr3L_17120001 RAL-307_100b 2528 chr3L 17149139 17149164 chr3L 17149245 17149260 19 104 29.5 0.0 14.8 1.2 121 chr3L 17149139 intron Rbp6 - chr3L 17149200 intron Rbp6 - chr3L 17149260 intron Rbp6 - chr3L_19_17145001 chr3L_17145001 RAL-307_100b 2529 chr3L 17194438 17194442 chr3L 17194544 17194553 5 110 16.5 37.5 27.0 0.2 115 chr3L 17194438 intron Rbp6 - chr3L 17194496 intron Rbp6 - chr3L 17194553 intron Rbp6 - chr3L_5_17190001 chr3L_17190001 RAL-307_100b 2530 chr3L 17194443 17194445 chr3L 17194533 17194556 4 102 15.0 33.5 24.2 0.2 113 chr3L 17194443 intron Rbp6 - chr3L 17194500 intron Rbp6 - chr3L 17194556 intron Rbp6 - chr3L_4_17190001 chr3L_17190001 RAL-307_100b 2531 chr3L 17217226 17217284 chr3L 17217331 17217384 53 102 15.5 11.5 13.5 3.7 158 chr3L 17217226 intron Rbp6 - chr3L 17217305 intron Rbp6 - chr3L 17217384 intron Rbp6 - chr3L_53_17215001 chr3L_17215001 RAL-307_100b 2532 chr3L 17272215 17272259 chr3L 17272373 17272417 32 155 13.5 13.0 13.2 2.3 202 chr3L 17272215 intergenic not near genes chr3L 17272316 intergenic not near genes chr3L 17272417 intergenic not near genes chr3L_32_17270001 chr3L_17270001 RAL-307_100b 2533 chr3L 17358019 17358058 chr3L 17358149 17358188 32 128 12.0 15.0 13.5 2.2 169 chr3L 17358019 3` UTR CG7692 + chr3L 17358104 intergenic CG7692 + chr3L 17358188 intergenic CG7692 + chr3L_32_17355001 chr3L_17355001 RAL-307_100b 2534 chr3L 17408891 17408928 chr3L 17408992 17409029 26 100 17.0 6.5 11.8 2.0 138 chr3L 17408891 intron blot - chr3L 17408960 intron blot - chr3L 17409029 intron blot - chr3L_26_17405001 chr3L_17405001 RAL-307_100b 2535 chr3L 17419835 17419891 chr3L 17419973 17420029 43 136 12.0 14.0 13.0 3.1 194 chr3L 17419835 intron blot - chr3L 17419932 intron blot - chr3L 17420029 intron blot - chr3L_43_17415001 chr3L_17415001 RAL-307_100b 2536 chr3L 17510719 17510766 chr3L 17510828 17510875 41 108 12.0 23.0 17.5 2.2 156 chr3L 17510719 exon Oatp74D + chr3L 17510797 intron Oatp74D + chr3L 17510875 intron Oatp74D + chr3L_41_17510001 chr3L_17510001 RAL-307_100b 2537 chr3L 17516953 17517011 chr3L 17524536 17524558 412 47 7577 15.0 14.5 14.8 3.0 7605 chr3L 17516953 intron CG7564 + chr3L 17520756 intron CG7564 + chr3L 17524558 3` UTR CG7564 + chr3L_47_17520001 chr3L_17520001 RAL-307_100b 2538 chr3L 17535789 17535792 chr3L 17535928 17535931 4 139 31.0 13.5 22.2 0.2 142 chr3L 17535789 intron Nedd4 + chr3L 17535860 intron Nedd4 + chr3L 17535931 intron Nedd4 + chr3L_4_17535001 chr3L_17535001 RAL-307_100b 2539 chr3L 17535796 17535843 chr3L 17535925 17535946 58 132 13.5 11.0 12.2 4.4 150 chr3L 17535796 intron Nedd4 + chr3L 17535871 intron Nedd4 + chr3L 17535946 intron Nedd4 + chr3L_58_17535001 chr3L_17535001 RAL-307_100b 2540 chr3L 17580560 17580611 chr3L 17580761 17580796 42 197 17.0 0.0 8.5 4.4 236 chr3L 17580560 intron Eip74EF - chr3L 17580678 intron Eip74EF - chr3L 17580796 intron Eip74EF - chr3L_42_17580001 chr3L_17580001 RAL-307_100b 2541 chr3L 17612190 17612248 chr3L 17612299 17612358 51 107 18.0 13.0 15.5 3.1 168 chr3L 17612190 intron Eip74EF - chr3L 17612274 intron Eip74EF - chr3L 17612358 intron Eip74EF - chr3L_51_17610001 chr3L_17610001 RAL-307_100b 2542 chr3L 17674623 17674674 chr3L 17675313 17675364 33 689 11.5 4.5 8.0 3.7 741 chr3L 17674623 intron CG34251 + chr3L 17674994 intron CG34251 + chr3L 17675364 intron CG34251 + chr3L_33_17670001 chr3L_17670001 RAL-307_100b 2543 chr3L 17730828 17730843 chr3L 17738183 17738198 mdg1 17 7355 25.5 14.5 20.0 0.8 7370 chr3L 17730828 intron Ccn + chr3L 17734513 intron Ccn + chr3L 17738198 intron Ccn + chr3L_17_17730001 chr3L_17730001 RAL-307_100b 2544 chr3L 17730844 17730879 chr3L 17738180 17738227 mdg1 27 7350 10.5 14.5 12.5 2.0 7383 chr3L 17730844 intron Ccn + chr3L 17734536 intron Ccn + chr3L 17738227 intron Ccn + chr3L_27_17730001 chr3L_17730001 RAL-307_100b 2545 chr3L 17789820 17789877 chr3L 17789921 17789978 47 100 9.5 13.5 11.5 3.8 158 chr3L 17789820 intergenic not near genes chr3L 17789899 intergenic not near genes chr3L 17789978 intergenic not near genes chr3L_47_17785001 chr3L_17785001 RAL-307_100b 2546 chr3L 17790433 17790602 chr3L 17790593 17790892 44 178 0.5 0.5 0.5 29.3 459 chr3L 17790433 intergenic not near genes chr3L 17790662 intergenic CG42815 - chr3L 17790892 intergenic CG42815 - chr3L_44_17790001 chr3L_17790001 RAL-307_100b 2547 chr3L 17790603 17790611 chr3L 17790893 17790901 5 290 0.5 16.0 8.2 0.5 298 chr3L 17790603 intergenic CG42815 - chr3L 17790752 intergenic CG42815 - chr3L 17790901 intergenic CG42815 - chr3L_5_17790001 chr3L_17790001 RAL-307_100b 2548 chr3L 17790612 17790624 chr3L 17790888 17790914 14 286 0.5 14.0 7.2 1.7 302 chr3L 17790612 intergenic CG42815 - chr3L 17790763 intergenic CG42815 - chr3L 17790914 intergenic CG42815 - chr3L_14_17790001 chr3L_17790001 RAL-307_100b 2549 chr3L 17790625 17790636 chr3L 17790885 17790926 11 280 0.5 14.0 7.2 1.3 301 chr3L 17790625 intergenic CG42815 - chr3L 17790776 intergenic CG42815 - chr3L 17790926 intergenic CG42815 - chr3L_11_17790001 chr3L_17790001 RAL-307_100b 2550 chr3L 17799790 17799842 chr3L 17801601 17801644 S-element 43 1810 10.0 18.0 14.0 2.9 1854 chr3L 17799790 intron NUCB1 - chr3L 17800717 intron NUCB1 - chr3L 17801644 intron NUCB1 - chr3L_43_17800001 chr3L_17800001 RAL-307_100b 2551 chr3L 17834301 17834354 chr3L 17834490 17834543 29 188 3.0 13.5 8.2 3.2 242 chr3L 17834301 intron Grd + chr3L 17834422 intron Grd + chr3L 17834543 intron Grd + chr3L_29_17830001 chr3L_17830001 RAL-307_100b 2552 chr3L 17918363 17918404 chr3L 17921174 17921226 opus 19 2824 10.5 10.0 10.2 1.7 2863 chr3L 17918363 intergenic not near genes chr3L 17919794 intergenic not near genes chr3L 17921226 intergenic not near genes chr3L_19_17915001 chr3L_17915001 RAL-307_100b 2553 chr3L 17921853 17921883 chr3L 17921965 17921995 9 111 16.5 10.0 13.2 0.6 142 chr3L 17921853 intergenic not near genes chr3L 17921924 intergenic not near genes chr3L 17921995 intergenic not near genes chr3L_9_17920001 chr3L_17920001 RAL-307_100b 2554 chr3L 17991557 17991582 chr3L 17991660 17991685 29 102 25.0 24.0 24.5 1.1 128 chr3L 17991557 intron Eip75B - chr3L 17991621 intron Eip75B - chr3L 17991685 intron Eip75B - chr3L_29_17990001 chr3L_17990001 RAL-307_100b 2555 chr3L 17991584 17991589 chr3L 17991646 17991692 5 94 22.0 24.5 23.2 0.2 108 chr3L 17991584 intron Eip75B - chr3L 17991638 intron Eip75B - chr3L 17991692 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-307_100b 2556 chr3L 18000647 18000707 chr3L 18000749 18000794 77 99 15.0 14.5 14.8 4.9 147 chr3L 18000647 intron Eip75B - chr3L 18000720 intron Eip75B - chr3L 18000794 intron Eip75B - chr3L_77_18000001 chr3L_18000001 RAL-307_100b 2557 chr3L 18011097 18011119 chr3L 18011289 18011311 23 192 12.5 6.0 9.2 2.3 214 chr3L 18011097 intron Eip75B - chr3L 18011204 intron Eip75B - chr3L 18011311 intron Eip75B - chr3L_23_18010001 chr3L_18010001 RAL-307_100b 2558 chr3L 18013946 18013959 chr3L 18014060 18014073 10 114 23.5 0.5 12.0 0.8 127 chr3L 18013946 intron Eip75B - chr3L 18014010 intron Eip75B - chr3L 18014073 intron Eip75B - chr3L_10_18010001 chr3L_18010001 RAL-307_100b 2559 chr3L 18029935 18029967 chr3L 18030037 18030066 20 101 19.0 0.0 9.5 1.9 131 chr3L 18029935 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030066 intron Eip75B - chr3L_20_18030001 chr3L_18030001 RAL-307_100b 2560 chr3L 18047687 18047737 chr3L 18056767 18056819 roo 34 9081 15.0 16.5 15.8 2.0 9132 chr3L 18047687 intron Eip75B - chr3L 18052253 intron Eip75B - chr3L 18056819 intron Eip75B - chr3L_34_18050001 chr3L_18050001 RAL-307_100b 2561 chr3L 18075218 18075253 chr3L 18075508 18075543 27 289 15.5 11.5 13.5 1.9 325 chr3L 18075218 intergenic not near genes chr3L 18075380 intergenic not near genes chr3L 18075543 intergenic not near genes chr3L_27_18075001 chr3L_18075001 RAL-307_100b 2562 chr3L 18089601 18089628 chr3L 18089719 18089741 22 113 20.5 0.0 10.2 2.0 140 chr3L 18089601 exon CG13698 - chr3L 18089671 intron CG13698 - chr3L 18089741 intron CG13698 - chr3L_22_18085001 chr3L_18085001 RAL-307_100b 2563 chr3L 18089633 18089646 chr3L 18089717 18089721 5 89 11.5 0.0 5.8 0.7 88 chr3L 18089633 exon CG13698 - chr3L 18089677 intron CG13698 - chr3L 18089721 intron CG13698 - chr3L_5_18085001 chr3L_18085001 RAL-307_100b 2564 chr3L 18092405 18092406 chr3L 18092554 18092556 4 150 23.0 45.5 34.2 0.1 151 chr3L 18092405 intron CG13698 - chr3L 18092480 intron CG13698 - chr3L 18092556 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-307_100b 2565 chr3L 18092408 18092418 chr3L 18092531 18092568 15 145 16.0 29.5 22.8 0.6 160 chr3L 18092408 intron CG13698 - chr3L 18092488 intron CG13698 - chr3L 18092568 intron CG13698 - chr3L_15_18090001 chr3L_18090001 RAL-307_100b 2566 chr3L 18092419 18092422 chr3L 18092515 18092571 7 128 13.0 22.5 17.8 0.4 152 chr3L 18092419 intron CG13698 - chr3L 18092495 intron CG13698 - chr3L 18092571 intron CG13698 - chr3L_7_18090001 chr3L_18090001 RAL-307_100b 2567 chr3L 12041212 12041214 chr3L 18096916 18096918 4 6055704 49.5 50.5 50.0 0.1 6055706 chr3L 12041212 intron rols - chr3L 15069065 exon cp309 - chr3L 18096918 intron CG13698 - chr3L_4_15065001 chr3L_15065001 RAL-307_100b 2568 chr3L 18107591 18107650 chr3L 18107709 18107763 42 117 9.0 12.5 10.8 3.6 172 chr3L 18107591 intergenic mRpS26 +,CG5147 - chr3L 18107677 intergenic CG5147 -,mRpS26 + chr3L 18107763 intergenic CG5147 -,mRpS26 + chr3L_42_18105001 chr3L_18105001 RAL-307_100b 2569 chr3L 18118187 18118241 chr3L 18118290 18118344 39 101 7.5 10.5 9.0 3.9 157 chr3L 18118187 3` UTR,intron CG32195 +,CG7341 + chr3L 18118266 3` UTR,intron CG32195 +,CG7341 + chr3L 18118344 3` UTR,intron CG32195 +,CG7341 + chr3L_39_18115001 chr3L_18115001 RAL-307_100b 2570 chr3L 18134592 18134646 chr3L 18134754 18134787 45 158 11.5 15.0 13.2 3.2 195 chr3L 18134592 intergenic not near genes chr3L 18134690 intergenic not near genes chr3L 18134787 intergenic not near genes chr3L_45_18130001 chr3L_18130001 RAL-307_100b 2571 chr3L 18150293 18150344 chr3L 18150415 18150466 41 121 9.5 11.5 10.5 3.6 173 chr3L 18150293 intron CG7330 + chr3L 18150380 intron CG7330 + chr3L 18150466 intron CG7330 + chr3L_41_18150001 chr3L_18150001 RAL-307_100b 2572 chr3L 18172665 18172702 chr3L 18172766 18172803 33 101 21.5 12.0 16.8 1.9 138 chr3L 18172665 intron W - chr3L 18172734 intron W - chr3L 18172803 intron W - chr3L_33_18170001 chr3L_18170001 RAL-307_100b 2573 chr3L 18175790 18175837 chr3L 18176054 18176101 38 262 10.0 7.0 8.5 4.0 311 chr3L 18175790 intron W - chr3L 18175946 intron W - chr3L 18176101 intron W - chr3L_38_18175001 chr3L_18175001 RAL-307_100b 2574 chr3L 18198929 18198931 chr3L 24821492 24821494 23 6622563 0.5 47.0 23.8 0.9 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_23_21510001 chr3L_21510001 RAL-307_100b 2575 chr3L 18203575 18203629 chr3L 18203695 18203737 20 110 13.5 0.0 6.8 2.6 162 chr3L 18203575 3` UTR CG7320 + chr3L 18203656 intergenic CG7320 + chr3L 18203737 intergenic CG7320 + chr3L_20_18200001 chr3L_18200001 RAL-307_100b 2576 chr3L 18207893 18207905 chr3L 18208001 18208015 18 110 13.5 0.0 6.8 2.3 122 chr3L 18207893 intergenic not near genes chr3L 18207954 intergenic not near genes chr3L 18208015 intergenic not near genes chr3L_18_18205001 chr3L_18205001 RAL-307_100b 2577 chr3L 18208273 18208325 chr3L 18208386 18208438 46 112 16.0 17.0 16.5 2.6 165 chr3L 18208273 intergenic not near genes chr3L 18208356 intergenic not near genes chr3L 18208438 intergenic not near genes chr3L_46_18205001 chr3L_18205001 RAL-307_100b 2578 chr3L 18210717 18210750 chr3L 18210818 18210850 26 99 10.5 12.5 11.5 2.1 133 chr3L 18210717 intergenic not near genes chr3L 18210784 intergenic not near genes chr3L 18210850 intergenic not near genes chr3L_26_18210001 chr3L_18210001 RAL-307_100b 2579 chr3L 18223139 18223186 chr3L 18223247 18223306 33 110 12.5 0.0 6.2 4.6 167 chr3L 18223139 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223306 intergenic not near genes chr3L_33_18220001 chr3L_18220001 RAL-307_100b 2580 chr3L 18226661 18226669 chr3L 18226771 18226784 6 113 8.5 19.5 14.0 0.4 123 chr3L 18226661 intergenic not near genes chr3L 18226722 intergenic not near genes chr3L 18226784 intergenic not near genes chr3L_6_18225001 chr3L_18225001 RAL-307_100b 2581 chr3L 18248935 18248985 chr3L 18249056 18249108 41 122 10.5 13.0 11.8 3.2 173 chr3L 18248935 intergenic not near genes chr3L 18249022 intergenic not near genes chr3L 18249108 intergenic not near genes chr3L_41_18245001 chr3L_18245001 RAL-307_100b 2582 chr3L 18262445 18262489 chr3L 18262553 18262597 32 106 10.5 10.5 10.5 2.8 152 chr3L 18262445 intergenic not near genes chr3L 18262521 intergenic not near genes chr3L 18262597 intergenic not near genes chr3L_32_18260001 chr3L_18260001 RAL-307_100b 2583 chr3L 18301332 18301380 chr3L 18301446 18301494 28 114 1.0 10.0 5.5 4.3 162 chr3L 18301332 intergenic CG13700 - chr3L 18301413 intergenic CG13700 - chr3L 18301494 intergenic CG13700 - chr3L_28_18300001 chr3L_18300001 RAL-307_100b 2584 chr3L 18324166 18324173 chr3L 18324260 18324277 7 101 0.0 30.0 15.0 0.4 111 chr3L 18324166 intergenic not near genes chr3L 18324222 intergenic not near genes chr3L 18324277 intergenic not near genes chr3L_7_18320001 chr3L_18320001 RAL-307_100b 2585 chr3L 18342054 18342101 chr3L 18342159 18342176 24 102 5.0 11.5 8.2 2.6 122 chr3L 18342054 intergenic not near genes chr3L 18342115 intergenic not near genes chr3L 18342176 intergenic not near genes chr3L_24_18340001 chr3L_18340001 RAL-307_100b 2586 chr3L 18352205 18352259 chr3L 18352810 18352823 21 602 7.0 6.0 6.5 2.8 618 chr3L 18352205 intergenic not near genes chr3L 18352514 intergenic not near genes chr3L 18352823 intergenic not near genes chr3L_21_18350001 chr3L_18350001 RAL-307_100b 2587 chr3L 18375182 18375218 chr3L 18375266 18375300 23 101 0.0 0.0 0.0 23.0 118 chr3L 18375182 intergenic not near genes chr3L 18375241 intergenic not near genes chr3L 18375300 intergenic not near genes chr3L_23_18375001 chr3L_18375001 RAL-307_100b 2588 chr3L 18383074 18383134 chr3L 18383183 18383241 31 107 7.0 15.0 11.0 2.6 167 chr3L 18383074 intergenic not near genes chr3L 18383158 intergenic not near genes chr3L 18383241 intergenic not near genes chr3L_31_18380001 chr3L_18380001 RAL-307_100b 2589 chr3L 18408706 18408760 chr3L 18408817 18408871 14 110 7.0 10.5 8.8 1.4 165 chr3L 18408706 intergenic not near genes chr3L 18408788 intergenic not near genes chr3L 18408871 intergenic not near genes chr3L_14_18405001 chr3L_18405001 RAL-307_100b 2590 chr3L 9013690 9013693 chr3L 18417066 18417066 5 9403374 90.0 80.0 85.0 0.1 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-307_100b 2591 chr3L 18436038 18436090 chr3L 18436161 18436213 30 121 9.5 7.5 8.5 3.2 175 chr3L 18436038 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436213 intergenic not near genes chr3L_30_18435001 chr3L_18435001 RAL-307_100b 2592 chr3L 18445224 18445281 chr3L 18445327 18445366 37 99 5.0 11.5 8.2 4.0 142 chr3L 18445224 intergenic not near genes chr3L 18445295 intergenic not near genes chr3L 18445366 intergenic not near genes chr3L_37_18445001 chr3L_18445001 RAL-307_100b 2593 chr3L 18448595 18448621 chr3L 18448712 18448738 19 117 18.5 13.0 15.8 1.1 143 chr3L 18448595 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448738 intergenic not near genes chr3L_19_18445001 chr3L_18445001 RAL-307_100b 2594 chr3L 18456247 18456303 chr3L 18456360 18456416 54 112 10.5 7.5 9.0 5.4 169 chr3L 18456247 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456416 3` UTR CR44670 - chr3L_54_18455001 chr3L_18455001 RAL-307_100b 2595 chr3L 18506111 18506160 chr3L 18509599 18509648 F-element 36 3487 16.5 15.5 16.0 2.1 3537 chr3L 18506111 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509648 intergenic not near genes chr3L_36_18505001 chr3L_18505001 RAL-307_100b 2596 chr3L 18511847 18511903 chr3L 18511964 18511995 38 115 12.5 16.5 14.5 2.5 148 chr3L 18511847 intergenic not near genes chr3L 18511921 intergenic not near genes chr3L 18511995 intergenic not near genes chr3L_38_18510001 chr3L_18510001 RAL-307_100b 2597 chr3L 18514884 18514902 chr3L 18520100 18520118 BS 22 5214 31.5 17.0 24.2 0.9 5234 chr3L 18514884 intergenic not near genes chr3L 18517501 intergenic not near genes chr3L 18520118 intergenic not near genes chr3L_22_18515001 chr3L_18515001 RAL-307_100b 2598 chr3L 18514904 18514942 chr3L 18520095 18520117 BS 26 5210 12.0 14.0 13.0 1.9 5213 chr3L 18514904 intergenic not near genes chr3L 18517510 intergenic not near genes chr3L 18520117 intergenic not near genes chr3L_26_18515001 chr3L_18515001 RAL-307_100b 2599 chr3L 18520522 18520578 chr3L 18520628 18520684 54 103 15.0 14.0 14.5 3.5 162 chr3L 18520522 intergenic not near genes chr3L 18520603 intergenic not near genes chr3L 18520684 intergenic not near genes chr3L_54_18520001 chr3L_18520001 RAL-307_100b 2600 chr3L 18528607 18528617 chr3L 18537793 18537803 roo 7 9186 26.5 12.5 19.5 0.3 9196 chr3L 18528607 intergenic not near genes chr3L 18533205 intergenic not near genes chr3L 18537803 intergenic not near genes chr3L_7_18530001 chr3L_18530001 RAL-307_100b 2601 chr3L 18528619 18528657 chr3L 18537792 18537843 roo 32 9184 12.5 12.5 12.5 2.4 9224 chr3L 18528619 intergenic not near genes chr3L 18533231 intergenic not near genes chr3L 18537843 intergenic not near genes chr3L_32_18530001 chr3L_18530001 RAL-307_100b 2602 chr3L 18567009 18567055 chr3L 18567114 18567166 39 109 8.0 14.5 11.2 3.2 157 chr3L 18567009 intron AstC-R1 + chr3L 18567088 intron AstC-R1 + chr3L 18567166 intron AstC-R1 + chr3L_39_18565001 chr3L_18565001 RAL-307_100b 2603 chr3L 18582196 18582248 chr3L 18582300 18582358 39 106 10.0 7.5 8.8 4.0 162 chr3L 18582196 intergenic not near genes chr3L 18582277 intergenic not near genes chr3L 18582358 intergenic not near genes chr3L_39_18580001 chr3L_18580001 RAL-307_100b 2604 chr3L 18586546 18586596 chr3L 18586670 18586716 56 121 17.5 14.0 15.8 3.3 170 chr3L 18586546 intergenic not near genes chr3L 18586631 intergenic not near genes chr3L 18586716 intergenic not near genes chr3L_56_18585001 chr3L_18585001 RAL-307_100b 2605 chr3L 18593924 18593982 chr3L 18595929 18595946 Doc 36 2001 9.5 7.5 8.5 3.8 2022 chr3L 18593924 intergenic term - chr3L 18594935 intergenic not near genes chr3L 18595946 intergenic CR45389 + chr3L_36_18590001 chr3L_18590001 RAL-307_100b 2606 chr3L 18607041 18607099 chr3L 18607148 18607206 54 101 18.5 14.0 16.2 3.1 165 chr3L 18607041 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L 18607124 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18607206 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_54_18605001 chr3L_18605001 RAL-307_100b 2607 chr3L 18638562 18638609 chr3L 18638679 18638721 55 118 16.5 20.0 18.2 2.9 159 chr3L 18638562 intron MYPT-75D + chr3L 18638642 intron MYPT-75D + chr3L 18638721 intron MYPT-75D + chr3L_55_18635001 chr3L_18635001 RAL-307_100b 2608 chr3L 18665190 18665209 chr3L 18665300 18665317 24 109 37.0 0.0 18.5 1.2 127 chr3L 18665190 intron MYPT-75D + chr3L 18665254 intron MYPT-75D + chr3L 18665317 intron MYPT-75D + chr3L_24_18665001 chr3L_18665001 RAL-307_100b 2609 chr3L 18677871 18677920 chr3L 18677986 18678040 35 117 8.0 12.0 10.0 3.2 169 chr3L 18677871 3` UTR GNBP1 + chr3L 18677956 intergenic GNBP1 + chr3L 18678040 intergenic GNBP1 + chr3L_35_18675001 chr3L_18675001 RAL-307_100b 2610 chr3L 18688140 18688160 chr3L 18688266 18688286 10 125 38.0 39.5 38.8 0.3 146 chr3L 18688140 intergenic not near genes chr3L 18688213 intergenic not near genes chr3L 18688286 intergenic not near genes chr3L_10_18685001 chr3L_18685001 RAL-307_100b 2611 chr3L 18695931 18695979 chr3L 18696076 18696101 28 136 25.5 18.0 21.8 1.2 170 chr3L 18695931 intergenic CG6893 +,Dic4 - chr3L 18696016 intergenic CG6893 +,Dic4 - chr3L 18696101 intergenic Dic4 -,CG6893 + chr3L_28_18695001 chr3L_18695001 RAL-307_100b 2612 chr3L 18710737 18710790 chr3L 18718714 18718762 Stalker2 49 7975 17.5 14.0 15.8 2.9 8025 chr3L 18710737 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_49_18710001 chr3L_18710001 RAL-307_100b 2613 chr3L 18721745 18721805 chr3L 18721861 18721921 40 114 10.0 10.0 10.0 3.6 176 chr3L 18721745 intergenic CG12477 - chr3L 18721833 intergenic CG12477 - chr3L 18721921 3` UTR CG12477 - chr3L_40_18720001 chr3L_18720001 RAL-307_100b 2614 chr3L 18753522 18753562 chr3L 18753629 18753669 10 107 11.5 11.0 11.2 0.8 147 chr3L 18753522 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753669 intron ftz-f1 - chr3L_10_18750001 chr3L_18750001 RAL-307_100b 2615 chr3L 18770629 18770670 chr3L 18770733 18770780 11 109 6.0 4.5 5.2 1.8 151 chr3L 18770629 intron ftz-f1 - chr3L 18770704 intron ftz-f1 - chr3L 18770780 intron ftz-f1 - chr3L_11_18770001 chr3L_18770001 RAL-307_100b 2616 chr3L 18772387 18772438 chr3L 18781093 18781144 roo 45 8704 18.0 15.0 16.5 2.6 8757 chr3L 18772387 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781144 intron ftz-f1 - chr3L_45_18775001 chr3L_18775001 RAL-307_100b 2617 chr3L 18784369 18784403 chr3L 18784483 18784517 23 113 14.5 12.5 13.5 1.6 148 chr3L 18784369 intron ftz-f1 - chr3L 18784443 intron ftz-f1 - chr3L 18784517 intron ftz-f1 - chr3L_23_18780001 chr3L_18780001 RAL-307_100b 2618 chr3L 18784721 18784725 chr3L 18784842 18784848 INE-1 4 122 30.5 6.5 18.5 0.2 127 chr3L 18784721 intron ftz-f1 - chr3L 18784784 intron ftz-f1 - chr3L 18784848 intron ftz-f1 - chr3L_4_18780001 chr3L_18780001 RAL-307_100b 2619 chr3L 18792547 18792605 chr3L 18792653 18792712 52 106 11.0 12.0 11.5 4.2 165 chr3L 18792547 intron ftz-f1 - chr3L 18792630 intron ftz-f1 - chr3L 18792712 intron ftz-f1 - chr3L_52_18790001 chr3L_18790001 RAL-307_100b 2620 chr3L 18810120 18810170 chr3L 18810222 18810230 11 95 15.5 1.0 8.2 1.2 110 chr3L 18810120 intron CG14073 - chr3L 18810175 intron CG14073 - chr3L 18810230 intron CG14073 - chr3L_11_18810001 chr3L_18810001 RAL-307_100b 2621 chr3L 18833758 18833811 chr3L 18834947 18834974 1360 50 1186 16.5 13.0 14.8 3.2 1216 chr3L 18833758 intron Indy - chr3L 18834366 intron Indy - chr3L 18834974 intron Indy - chr3L_50_18830001 chr3L_18830001 RAL-307_100b 2622 chr3L 18839710 18839768 chr3L 18839818 18839886 32 107 0.5 0.5 0.5 21.3 176 chr3L 18839710 intron Indy - chr3L 18839798 intron Indy - chr3L 18839886 intron Indy - chr3L_32_18835001 chr3L_18835001 RAL-307_100b 2623 chr3L 18863954 18863960 chr3L 18864064 18864070 5 110 13.0 0.0 6.5 0.7 116 chr3L 18863954 intron CG6865 + chr3L 18864012 intron CG6865 + chr3L 18864070 intron CG6865 + chr3L_5_18860001 chr3L_18860001 RAL-307_100b 2624 chr3L 18868929 18868976 chr3L 18869056 18869102 42 126 17.0 13.5 15.2 2.6 173 chr3L 18868929 3` UTR Dysb + chr3L 18869016 3` UTR Dysb + chr3L 18869102 3` UTR Dysb + chr3L_42_18865001 chr3L_18865001 RAL-307_100b 2625 chr3L 18924454 18924509 chr3L 18924555 18924610 29 100 7.5 9.5 8.5 3.1 156 chr3L 18924454 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924610 intron CG32204 - chr3L_29_18920001 chr3L_18920001 RAL-307_100b 2626 chr3L 18928882 18928893 chr3L 18928987 18928998 10 105 0.0 13.0 6.5 1.3 116 chr3L 18928882 intron CG32204 - chr3L 18928940 intron CG32204 - chr3L 18928998 intron CG32204 - chr3L_10_18925001 chr3L_18925001 RAL-307_100b 2627 chr3L 18933075 18933127 chr3L 18933178 18933237 49 108 11.5 17.5 14.5 3.2 162 chr3L 18933075 intron CG32204 - chr3L 18933156 intron CG32204 - chr3L 18933237 intron CG32204 - chr3L_49_18930001 chr3L_18930001 RAL-307_100b 2628 chr3L 18959972 18960027 chr3L 18960078 18960133 28 106 12.0 15.5 13.8 1.9 161 chr3L 18959972 intergenic not near genes chr3L 18960052 intergenic not near genes chr3L 18960133 intergenic not near genes chr3L_28_18960001 chr3L_18960001 RAL-307_100b 2629 chr3L 18962576 18962630 chr3L 18962681 18962735 16 101 16.0 16.5 16.2 0.9 159 chr3L 18962576 intergenic not near genes chr3L 18962656 intergenic not near genes chr3L 18962735 intergenic not near genes chr3L_16_18960001 chr3L_18960001 RAL-307_100b 2630 chr3L 19008826 19008869 chr3L 19009189 19009232 jockey 42 360 9.5 18.5 14.0 2.8 406 chr3L 19008826 intron nkd - chr3L 19009029 intron nkd - chr3L 19009232 intron nkd - chr3L_42_19005001 chr3L_19005001 RAL-307_100b 2631 chr3L 19015152 19015217 chr3L 19015261 19015295 32 106 0.5 8.5 4.5 5.8 143 chr3L 19015152 intron nkd - chr3L 19015224 intron nkd - chr3L 19015295 intron nkd - chr3L_32_19015001 chr3L_19015001 RAL-307_100b 2632 chr3L 19111378 19111409 chr3L 19111488 19111509 41 107 31.0 16.0 23.5 1.7 131 chr3L 19111378 intron CG14082 - chr3L 19111444 intron CG14082 - chr3L 19111509 intron CG14082 - chr3L_41_19110001 chr3L_19110001 RAL-307_100b 2633 chr3L 19115616 19115622 chr3L 19115816 19115827 BS 6 203 33.5 15.0 24.2 0.2 211 chr3L 19115616 intron CG14082 - chr3L 19115722 intron CG14082 - chr3L 19115827 intron CG14082 - chr3L_6_19115001 chr3L_19115001 RAL-307_100b 2634 chr3L 19115625 19115668 chr3L 19115814 19115873 BS 33 199 16.5 12.5 14.5 2.1 248 chr3L 19115625 intron CG14082 - chr3L 19115749 intron CG14082 - chr3L 19115873 intron CG14082 - chr3L_33_19115001 chr3L_19115001 RAL-307_100b 2635 chr3L 19117015 19117076 chr3L 19124487 19124548 mdg1 59 7469 17.0 15.0 16.0 3.5 7533 chr3L 19117015 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124548 intron CG14082 - chr3L_59_19120001 chr3L_19120001 RAL-307_100b 2636 chr3L 19138127 19138157 chr3L 19138234 19138276 25 112 0.0 16.0 8.0 2.8 149 chr3L 19138127 intron CG14082 - chr3L 19138202 intron CG14082 - chr3L 19138276 intron CG14082 - chr3L_25_19135001 chr3L_19135001 RAL-307_100b 2637 chr3L 19208036 19208065 chr3L 19209435 19209464 Doc 27 1397 31.0 17.0 24.0 1.1 1428 chr3L 19208036 intron fz2 - chr3L 19208750 intron fz2 - chr3L 19209464 intron fz2 - chr3L_27_19205001 chr3L_19205001 RAL-307_100b 2638 chr3L 19208069 19208091 chr3L 19209430 19209475 Doc 16 1390 16.0 15.0 15.5 1.0 1406 chr3L 19208069 intron fz2 - chr3L 19208772 intron fz2 - chr3L 19209475 intron fz2 - chr3L_16_19205001 chr3L_19205001 RAL-307_100b 2639 chr3L 19219749 19219767 chr3L 19219829 19219837 4 79 13.0 0.5 6.8 0.5 88 chr3L 19219749 intron fz2 - chr3L 19219793 intron fz2 - chr3L 19219837 intron fz2 - chr3L_4_19215001 chr3L_19215001 RAL-307_100b 2640 chr3L 19220632 19220633 chr3L 22908066 22908067 23 3687434 82.5 78.0 80.2 0.3 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_23_21060001 chr3L_21060001 RAL-307_100b 2641 chr3L 19220634 19220635 chr3L 22908065 22908067 15 3687432 83.5 77.5 80.5 0.2 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_15_21060001 chr3L_21060001 RAL-307_100b 2642 chr3L 19220636 19220637 chr3L 22908066 22908066 17 3687430 84.0 78.0 81.0 0.2 3687430 chr3L 19220636 intron fz2 - chr3L 21064351 intron siz + chr3L 22908066 intergenic not near genes chr3L_17_21060001 chr3L_21060001 RAL-307_100b 2643 chr3L 19262185 19262244 chr3L 19262292 19262350 54 105 9.0 12.5 10.8 4.6 165 chr3L 19262185 3` UTR Bet1 + chr3L 19262268 3` UTR,3` UTR Bet1 +,Max - chr3L 19262350 3` UTR,3` UTR Bet1 +,Max - chr3L_54_19260001 chr3L_19260001 RAL-307_100b 2644 chr3L 19269790 19269849 chr3L 19270019 19270078 95 220 17.5 24.5 21.0 4.3 288 chr3L 19269790 intron,exon CG14085 +,CG14088 - chr3L 19269934 intron,exon CG14085 +,CG14088 - chr3L 19270078 intron,exon CG14085 +,CG14088 - chr3L_95_19265001 chr3L_19265001 RAL-307_100b 2645 chr3L 19265220 19265223 chr3L 19272777 19272784 6 7558 113.5 131.5 122.5 0.0 7564 chr3L 19265220 3` UTR,exon CG42374 +,CG9666 + chr3L 19269002 intergenic CG9629 -,CG14085 + chr3L 19272784 exon CG14085 + chr3L_6_19265001 chr3L_19265001 RAL-307_100b 2646 chr3L 19265219 19265277 chr3L 19272787 19272834 57 7563 151.5 130.5 141.0 0.4 7615 chr3L 19265219 3` UTR,exon CG42374 +,CG9666 + chr3L 19269026 intergenic CG9629 -,CG14085 + chr3L 19272834 exon CG14085 + chr3L_57_19265001 chr3L_19265001 RAL-307_100b 2647 chr3L 19342735 19342777 chr3L 19342851 19342893 44 115 16.0 11.0 13.5 3.0 158 chr3L 19342735 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342893 3` UTR CG32206 - chr3L_44_19340001 chr3L_19340001 RAL-307_100b 2648 chr3L 19346845 19346883 chr3L 19346953 19346980 15 101 4.0 27.0 15.5 0.9 135 chr3L 19346845 intron CG32206 - chr3L 19346912 intron CG32206 - chr3L 19346980 intron CG32206 - chr3L_15_19345001 chr3L_19345001 RAL-307_100b 2649 chr3L 19365920 19365929 chr3L 19366011 19366051 8 117 0.0 22.5 11.2 0.7 131 chr3L 19365920 intron CG32206 - chr3L 19365986 intron CG32206 - chr3L 19366051 intron CG32206 - chr3L_8_19365001 chr3L_19365001 RAL-307_100b 2650 chr3L 19398915 19398921 chr3L 19403657 19403663 F-element 6 4741 18.5 21.5 20.0 0.3 4748 chr3L 19398915 intron CG32206 - chr3L 19401289 intron CG32206 - chr3L 19403663 intron CG32206 - chr3L_6_19400001 chr3L_19400001 RAL-307_100b 2651 chr3L 19398924 19398932 chr3L 19403656 19403669 F-element 9 4736 12.5 21.5 17.0 0.5 4745 chr3L 19398924 intron CG32206 - chr3L 19401296 intron CG32206 - chr3L 19403669 intron CG32206 - chr3L_9_19400001 chr3L_19400001 RAL-307_100b 2652 chr3L 19423188 19423201 chr3L 19487031 19487031 4 63834 38.0 90.5 64.2 0.1 63843 chr3L 19423188 3` UTR CR32205 - chr3L 19455110 5` UTR CR45434 + chr3L 19487031 3` UTR pncr009:3L - chr3L_4_19455001 chr3L_19455001 RAL-307_100b 2653 chr3L 19430365 19430431 chr3L 19430474 19430531 33 104 2.0 14.0 8.0 3.7 166 chr3L 19430365 intergenic not near genes chr3L 19430448 intergenic not near genes chr3L 19430531 intergenic not near genes chr3L_33_19430001 chr3L_19430001 RAL-307_100b 2654 chr3L 19439150 19439162 chr3L 19439254 19439266 11 103 23.5 17.5 20.5 0.5 116 chr3L 19439150 intergenic not near genes chr3L 19439208 intergenic not near genes chr3L 19439266 intergenic not near genes chr3L_11_19435001 chr3L_19435001 RAL-307_100b 2655 chr3L 19439164 19439200 chr3L 19439251 19439302 36 101 12.5 16.5 14.5 2.3 138 chr3L 19439164 intergenic not near genes chr3L 19439233 intergenic not near genes chr3L 19439302 intergenic not near genes chr3L_36_19435001 chr3L_19435001 RAL-307_100b 2656 chr3L 19464294 19464323 chr3L 19464396 19464434 8 95 24.5 0.5 12.5 0.6 140 chr3L 19464294 exon CG14095 - chr3L 19464364 exon CG14095 - chr3L 19464434 exon CG14095 - chr3L_8_19460001 chr3L_19460001 RAL-307_100b 2657 chr3L 19488476 19488503 chr3L 19488583 19488610 20 107 31.5 17.0 24.2 0.8 134 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488543 intergenic pncr009:3L -,CG32212 + chr3L 19488610 intergenic pncr009:3L -,CG32212 + chr3L_20_19485001 chr3L_19485001 RAL-307_100b 2658 chr3L 19527902 19527909 chr3L 19528006 19528013 5 104 37.0 20.0 28.5 0.2 111 chr3L 19527902 intergenic not near genes chr3L 19527958 intergenic not near genes chr3L 19528013 intergenic not near genes chr3L_5_19525001 chr3L_19525001 RAL-307_100b 2659 chr3L 19527911 19527956 chr3L 19528005 19528060 51 101 14.0 20.0 17.0 2.8 149 chr3L 19527911 intergenic not near genes chr3L 19527986 intergenic not near genes chr3L 19528060 intergenic not near genes chr3L_51_19525001 chr3L_19525001 RAL-307_100b 2660 chr3L 19544211 19544268 chr3L 19544312 19544327 44 97 21.5 13.0 17.2 2.4 116 chr3L 19544211 intergenic CG9279 -,l(3)76BDr - chr3L 19544269 intergenic l(3)76BDr -,CG9279 - chr3L 19544327 intergenic l(3)76BDr -,CG9279 - chr3L_44_19540001 chr3L_19540001 RAL-307_100b 2661 chr3L 19820273 19820311 chr3L 19827847 19827882 412 33 7572 10.5 13.0 11.8 2.6 7609 chr3L 19820273 intron Deaf1 + chr3L 19824078 intron Deaf1 + chr3L 19827882 intron Deaf1 + chr3L_33_19820001 chr3L_19820001 RAL-307_100b 2662 chr3L 19845581 19845584 chr3L 23730762 23730763 4 3885180 36.0 62.5 49.2 0.1 3885182 chr3L 19845581 5` UTR Papss + chr3L 21788172 intergenic not near genes chr3L 23730763 intergenic not near genes chr3L_4_21785001 chr3L_21785001 RAL-307_100b 2663 chr3L 19846579 19846637 chr3L 19846702 19846760 34 121 9.5 13.0 11.2 2.8 181 chr3L 19846579 intron Papss + chr3L 19846670 intron Papss + chr3L 19846760 intron Papss + chr3L_34_19845001 chr3L_19845001 RAL-307_100b 2664 chr3L 19848489 19848503 chr3L 19857698 19857718 roo 14 9214 32.0 12.0 22.0 0.6 9229 chr3L 19848489 intron Papss + chr3L 19853104 intron Papss + chr3L 19857718 intron Papss + chr3L_14_19850001 chr3L_19850001 RAL-307_100b 2665 chr3L 19848504 19848509 chr3L 19857697 19857724 roo 9 9213 29.0 11.0 20.0 0.4 9220 chr3L 19848504 intron Papss + chr3L 19853114 intron Papss + chr3L 19857724 intron Papss + chr3L_9_19850001 chr3L_19850001 RAL-307_100b 2666 chr3L 19848510 19848528 chr3L 19857694 19857743 roo 20 9208 19.5 11.0 15.2 1.2 9233 chr3L 19848510 intron Papss + chr3L 19853126 intron Papss + chr3L 19857743 intron Papss + chr3L_20_19850001 chr3L_19850001 RAL-307_100b 2667 chr3L 19861800 19861803 chr3L 19863613 19863616 S-element 4 1813 32.5 14.5 23.5 0.2 1816 chr3L 19861800 5` UTR CR45433 + chr3L 19862708 intergenic not near genes chr3L 19863616 intergenic not near genes chr3L_4_19860001 chr3L_19860001 RAL-307_100b 2668 chr3L 19861804 19861850 chr3L 19863609 19863663 S-element 33 1812 13.5 12.0 12.8 2.4 1859 chr3L 19861804 5` UTR CR45433 + chr3L 19862734 intergenic not near genes chr3L 19863663 intergenic not near genes chr3L_33_19860001 chr3L_19860001 RAL-307_100b 2669 chr3L 19961257 19961308 chr3L 19961492 19961544 58 231 16.5 13.5 15.0 3.6 287 chr3L 19961257 intron Ac76E + chr3L 19961400 intron Ac76E + chr3L 19961544 intron Ac76E + chr3L_58_19960001 chr3L_19960001 RAL-307_100b 2670 chr3L 19981178 19981235 chr3L 19981283 19981340 41 104 12.0 7.5 9.8 3.8 162 chr3L 19981178 intergenic not near genes chr3L 19981259 intergenic CG17732 + chr3L 19981340 intergenic CG17732 + chr3L_41_19980001 chr3L_19980001 RAL-307_100b 2671 chr3L 20002958 20002983 chr3L 22753756 22753756 McClintock 4 2750785 27.0 66.5 46.8 0.1 2750798 chr3L 20002958 exon CG7668 + chr3L 21378357 intergenic not near genes chr3L 22753756 intron SPoCk + chr3L_4_21375001 chr3L_21375001 RAL-307_100b 2672 chr3L 20083418 20083423 chr3L 20083521 20083529 6 106 29.5 41.5 35.5 0.2 111 chr3L 20083418 intron sNPF-R - chr3L 20083474 intron sNPF-R - chr3L 20083529 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-307_100b 2673 chr3L 20096064 20096120 chr3L 20096193 20096239 17 124 10.5 0.5 5.5 2.6 175 chr3L 20096064 intergenic not near genes chr3L 20096152 intergenic not near genes chr3L 20096239 intergenic not near genes chr3L_17_20095001 chr3L_20095001 RAL-307_100b 2674 chr3L 20113452 20113462 chr3L 20113572 20113582 10 120 43.5 14.5 29.0 0.3 130 chr3L 20113452 intergenic not near genes chr3L 20113517 intergenic not near genes chr3L 20113582 intergenic not near genes chr3L_10_20110001 chr3L_20110001 RAL-307_100b 2675 chr3L 20113463 20113504 chr3L 20113571 20113624 45 118 18.0 14.0 16.0 2.6 161 chr3L 20113463 intergenic not near genes chr3L 20113544 intergenic not near genes chr3L 20113624 intergenic not near genes chr3L_45_20110001 chr3L_20110001 RAL-307_100b 2676 chr3L 20113636 20113687 chr3L 20122918 20122962 roo 41 9282 14.0 16.5 15.2 2.5 9326 chr3L 20113636 intergenic not near genes chr3L 20118299 intergenic not near genes chr3L 20122962 intergenic not near genes chr3L_41_20115001 chr3L_20115001 RAL-307_100b 2677 chr3L 20143061 20143113 chr3L 20143166 20143208 44 102 13.0 17.0 15.0 2.8 147 chr3L 20143061 intergenic not near genes chr3L 20143134 intergenic not near genes chr3L 20143208 intergenic not near genes chr3L_44_20140001 chr3L_20140001 RAL-307_100b 2678 chr3L 20146325 20146334 chr3L 20146655 20146662 7 333 36.5 12.5 24.5 0.3 337 chr3L 20146325 intergenic not near genes chr3L 20146494 intergenic not near genes chr3L 20146662 intergenic not near genes chr3L_7_20145001 chr3L_20145001 RAL-307_100b 2679 chr3L 20146336 20146339 chr3L 20146653 20146660 5 332 36.0 11.5 23.8 0.2 324 chr3L 20146336 intergenic not near genes chr3L 20146498 intergenic not near genes chr3L 20146660 intergenic not near genes chr3L_5_20145001 chr3L_20145001 RAL-307_100b 2680 chr3L 20146340 20146366 chr3L 20146652 20146709 21 329 17.0 11.5 14.2 1.4 369 chr3L 20146340 intergenic not near genes chr3L 20146524 intergenic not near genes chr3L 20146709 intergenic not near genes chr3L_21_20145001 chr3L_20145001 RAL-307_100b 2681 chr3L 20148260 20148318 chr3L 20148375 20148433 56 112 13.5 14.0 13.8 3.8 173 chr3L 20148260 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148433 intergenic not near genes chr3L_56_20145001 chr3L_20145001 RAL-307_100b 2682 chr3L 20218206 20218228 chr3L 20218347 20218369 28 141 0.5 21.5 11.0 2.3 163 chr3L 20218206 intergenic CG6933 - chr3L 20218288 intergenic CG6933 - chr3L 20218369 intergenic CG6933 - chr3L_28_20215001 chr3L_20215001 RAL-307_100b 2683 chr3L 20257308 20257363 chr3L 20258453 20258507 pogo 50 1142 12.5 17.0 14.8 3.2 1199 chr3L 20257308 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258507 intron rdgC + chr3L_50_20255001 chr3L_20255001 RAL-307_100b 2684 chr3L 20283654 20283658 chr3L 20283763 20283767 5 108 45.5 13.0 29.2 0.2 113 chr3L 20283654 intron gogo - chr3L 20283710 intron gogo - chr3L 20283767 intron gogo - chr3L_5_20280001 chr3L_20280001 RAL-307_100b 2685 chr3L 20283659 20283708 chr3L 20283761 20283817 51 107 12.0 12.0 12.0 3.9 158 chr3L 20283659 intron gogo - chr3L 20283738 intron gogo - chr3L 20283817 intron gogo - chr3L_51_20280001 chr3L_20280001 RAL-307_100b 2686 chr3L 20321119 20321125 chr3L 20342900 20342906 17.6 7 21781 36.5 135.0 85.8 0.1 21787 chr3L 20321119 exon Spn77Bb + chr3L 20332012 intergenic not near genes chr3L 20342906 exon Spn77Bc + chr3L_7_20330001 chr3L_20330001 RAL-307_100b 2687 chr3L 20345583 20345588 chr3L 20345689 20345694 6 106 48.0 19.0 33.5 0.2 111 chr3L 20345583 intergenic Rbbp5 - chr3L 20345638 intergenic Rbbp5 - chr3L 20345694 intergenic Rbbp5 - chr3L_6_20345001 chr3L_20345001 RAL-307_100b 2688 chr3L 20345589 20345594 chr3L 20345688 20345700 9 105 42.5 18.5 30.5 0.3 111 chr3L 20345589 intergenic Rbbp5 - chr3L 20345644 intergenic Rbbp5 - chr3L 20345700 intergenic Rbbp5 - chr3L_9_20345001 chr3L_20345001 RAL-307_100b 2689 chr3L 20345596 20345617 chr3L 20345687 20345723 39 102 27.5 17.5 22.5 1.7 127 chr3L 20345596 intergenic Rbbp5 - chr3L 20345660 intergenic Rbbp5 - chr3L 20345723 intergenic Rbbp5 - chr3L_39_20345001 chr3L_20345001 RAL-307_100b 2690 chr3L 20345618 20345638 chr3L 20345685 20345742 22 99 16.0 18.0 17.0 1.2 124 chr3L 20345618 intergenic Rbbp5 - chr3L 20345680 intergenic Rbbp5 - chr3L 20345742 3` UTR Rbbp5 - chr3L_22_20345001 chr3L_20345001 RAL-307_100b 2691 chr3L 20386912 20386971 chr3L 20387039 20387098 48 126 14.0 12.0 13.0 3.4 186 chr3L 20386912 intron fbl + chr3L 20387005 intron fbl + chr3L 20387098 intron fbl + chr3L_48_20385001 chr3L_20385001 RAL-307_100b 2692 chr3L 20391517 20391568 chr3L 20391636 20391687 57 116 15.5 12.5 14.0 3.8 170 chr3L 20391517 intergenic fbl +,CR43944 -,CG33969 - chr3L 20391602 intergenic CG33969 -,fbl +,CR43944 - chr3L 20391687 3` UTR CG33969 - chr3L_57_20390001 chr3L_20390001 RAL-307_100b 2693 chr3L 20476733 20476783 chr3L 20484357 20484407 springer 41 7621 14.0 20.0 17.0 2.3 7674 chr3L 20476733 3` UTR isoQC + chr3L 20480570 intergenic not near genes chr3L 20484407 3` UTR ZnT77C - chr3L_41_20480001 chr3L_20480001 RAL-307_100b 2694 chr3L 20525229 20525230 chr3L 24821494 24821494 7 4296264 55.5 48.5 52.0 0.1 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_7_22670001 chr3L_22670001 RAL-307_100b 2695 chr3L 20590045 20590095 chr3L 20590604 20590629 412 49 558 15.0 14.5 14.8 3.1 584 chr3L 20590045 intergenic not near genes chr3L 20590337 intergenic not near genes chr3L 20590629 intergenic not near genes chr3L_49_20590001 chr3L_20590001 RAL-307_100b 2696 chr3L 20739471 20739526 chr3L 20739609 20739663 15 140 4.0 9.0 6.5 2.0 192 chr3L 20739471 intron CG13252 + chr3L 20739567 intron CG13252 + chr3L 20739663 intron CG13252 + chr3L_15_20735001 chr3L_20735001 RAL-307_100b 2697 chr3L 4013829 4013831 chr3L 20749512 20749514 4 16735683 36.0 72.5 54.2 0.1 16735685 chr3L 4013829 intergenic not near genes chr3L 12381672 intron Ncc69 - chr3L 20749514 intergenic not near genes chr3L_4_12380001 chr3L_12380001 RAL-307_100b 2698 chr3L 20819604 20819630 chr3L 20819852 20819878 16 247 22.5 11.5 17.0 0.9 274 chr3L 20819604 intron Pka-R1 + chr3L 20819741 intron Pka-R1 + chr3L 20819878 intron Pka-R1 + chr3L_16_20815001 chr3L_20815001 RAL-307_100b 2699 chr3L 20819632 20819656 chr3L 20819849 20819904 18 244 10.5 10.5 10.5 1.6 272 chr3L 20819632 intron Pka-R1 + chr3L 20819768 intron Pka-R1 + chr3L 20819904 intron Pka-R1 + chr3L_18_20815001 chr3L_20815001 RAL-307_100b 2700 chr3L 20821260 20821311 chr3L 20824896 20824947 NOF 45 3634 16.0 12.5 14.2 3.0 3687 chr3L 20821260 intron Pka-R1 + chr3L 20823104 intron Pka-R1 + chr3L 20824947 intron Pka-R1 + chr3L_45_20820001 chr3L_20820001 RAL-307_100b 2701 chr3L 20849250 20849299 chr3L 20849352 20849401 41 103 17.0 19.0 18.0 2.2 151 chr3L 20849250 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849401 intron CG32432 - chr3L_41_20845001 chr3L_20845001 RAL-307_100b 2702 chr3L 20858045 20858105 chr3L 20858169 20858229 35 121 5.0 9.0 7.0 4.4 184 chr3L 20858045 intron CG32432 - chr3L 20858137 intron CG32432 - chr3L 20858229 intron CG32432 - chr3L_35_20855001 chr3L_20855001 RAL-307_100b 2703 chr3L 20913730 20913738 chr3L 20913837 20913845 5 106 35.5 18.0 26.8 0.2 115 chr3L 20913730 intergenic CR43930 - chr3L 20913788 intergenic CR43930 - chr3L 20913845 intergenic CR43930 - chr3L_5_20910001 chr3L_20910001 RAL-307_100b 2704 chr3L 20913746 20913752 chr3L 20913832 20913854 10 95 22.0 16.0 19.0 0.5 108 chr3L 20913746 intergenic CR43930 - chr3L 20913800 intergenic CR43930 - chr3L 20913854 intergenic CR43930 - chr3L_10_20910001 chr3L_20910001 RAL-307_100b 2705 chr3L 20913753 20913782 chr3L 20913829 20913864 39 95 10.0 14.0 12.0 3.0 111 chr3L 20913753 intergenic CR43930 - chr3L 20913808 intergenic CR43930 - chr3L 20913864 intergenic CR43930 - chr3L_39_20910001 chr3L_20910001 RAL-307_100b 2706 chr3L 21014895 21014897 chr3L 21023396 21023403 Tirant 4 8504 42.5 12.0 27.2 0.1 8508 chr3L 21014895 intron skd - chr3L 21019149 intron skd - chr3L 21023403 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-307_100b 2707 chr3L 21014898 21014948 chr3L 21023394 21023444 Tirant 45 8496 12.5 9.5 11.0 3.8 8546 chr3L 21014898 intron skd - chr3L 21019171 intron skd - chr3L 21023444 intron skd - chr3L_45_21015001 chr3L_21015001 RAL-307_100b 2708 chr3L 21079793 21079800 chr3L 21079963 21079970 7 170 1.0 14.0 7.5 0.8 177 chr3L 21079793 intron ko - chr3L 21079882 intron ko - chr3L 21079970 intron ko - chr3L_7_21075001 chr3L_21075001 RAL-307_100b 2709 chr3L 21079801 21079819 chr3L 21079959 21079989 17 168 1.0 13.0 7.0 2.1 188 chr3L 21079801 intron ko - chr3L 21079895 intron ko - chr3L 21079989 intron ko - chr3L_17_21075001 chr3L_21075001 RAL-307_100b 2710 chr3L 21093754 21093812 chr3L 21093892 21093950 47 136 17.5 9.0 13.2 3.3 196 chr3L 21093754 intron ko - chr3L 21093852 intron ko - chr3L 21093950 intron ko - chr3L_47_21090001 chr3L_21090001 RAL-307_100b 2711 chr3L 21151840 21151895 chr3L 21156949 21157004 flea 45 5108 15.5 15.5 15.5 2.7 5164 chr3L 21151840 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21157004 intron Ac78C - chr3L_45_21150001 chr3L_21150001 RAL-307_100b 2712 chr3L 21243723 21243740 chr3L 21251311 21251318 412 8 7584 30.0 18.5 24.2 0.3 7595 chr3L 21243723 intron Eip78C + chr3L 21247520 intron Eip78C + chr3L 21251318 intron Eip78C + chr3L_8_21245001 chr3L_21245001 RAL-307_100b 2713 chr3L 21243742 21243772 chr3L 21251310 21251316 412 15 7572 11.0 17.5 14.2 1.0 7574 chr3L 21243742 intron Eip78C + chr3L 21247529 intron Eip78C + chr3L 21251316 intron Eip78C + chr3L_15_21245001 chr3L_21245001 RAL-307_100b 2714 chr3L 21274181 21274218 chr3L 21274377 21274414 35 194 20.0 16.5 18.2 1.8 233 chr3L 21274181 intron AcCoAS - chr3L 21274298 intron AcCoAS - chr3L 21274414 intron AcCoAS - chr3L_35_21270001 chr3L_21270001 RAL-307_100b 2715 chr3L 21274220 21274238 chr3L 21274376 21274434 23 188 8.5 15.0 11.8 1.8 214 chr3L 21274220 intron AcCoAS - chr3L 21274327 intron AcCoAS - chr3L 21274434 intron AcCoAS - chr3L_23_21270001 chr3L_21270001 RAL-307_100b 2716 chr3L 21306124 21306164 chr3L 21315308 21315348 roo 39 9183 20.0 12.5 16.2 2.3 9224 chr3L 21306124 3` UTR CG7632 + chr3L 21310736 intron Pc - chr3L 21315348 3` UTR Pc - chr3L_39_21310001 chr3L_21310001 RAL-307_100b 2717 chr3L 21306165 21306177 chr3L 21315306 21315355 roo 16 9179 14.5 12.0 13.2 1.1 9190 chr3L 21306165 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310760 intron Pc - chr3L 21315355 3` UTR Pc - chr3L_16_21310001 chr3L_21310001 RAL-307_100b 2718 chr3L 21319501 21319559 chr3L 21319616 21319674 80 111 20.5 17.5 19.0 4.0 173 chr3L 21319501 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319674 5` UTR Rab26 + chr3L_80_21315001 chr3L_21315001 RAL-307_100b 2719 chr3L 21372697 21372753 chr3L 21379230 21379285 McClintock 18 6531 10.5 7.0 8.8 1.8 6588 chr3L 21372697 intergenic not near genes chr3L 21375991 intergenic not near genes chr3L 21379285 intergenic not near genes chr3L_18_21375001 chr3L_21375001 RAL-307_100b 2720 chr3L 21415130 21415166 chr3L 21415222 21415269 38 106 10.0 21.5 15.8 2.3 139 chr3L 21415130 intron rgn + chr3L 21415200 intron rgn + chr3L 21415269 intron rgn + chr3L_38_21415001 chr3L_21415001 RAL-307_100b 2721 chr3L 4341331 4341335 chr3L 21448026 21448026 9 17106693 78.5 53.5 66.0 0.1 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_9_12890001 chr3L_12890001 RAL-307_100b 2722 chr3L 7201270 7201270 chr3L 21448026 21448026 4 14246756 41.5 53.5 47.5 0.1 14246756 chr3L 7201270 intergenic not near genes chr3L 14324648 intron,intron fz +,CR45025 - chr3L 21448026 3` UTR Syx7 + chr3L_4_14320001 chr3L_14320001 RAL-307_100b 2723 chr3L 4341331 4341333 chr3L 21448027 21448027 5 17106695 77.5 53.0 65.2 0.1 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-307_100b 2724 chr3L 21498825 21498833 chr3L 21500478 21500494 1360 16 1658 37.0 20.0 28.5 0.5 1669 chr3L 21498825 5` UTR,intron CR43933 +,Glg1 - chr3L 21499660 intron Glg1 - chr3L 21500494 intron Glg1 - chr3L_16_21495001 chr3L_21495001 RAL-307_100b 2725 chr3L 21498834 21498851 chr3L 21500471 21500497 1360 18 1655 25.0 18.0 21.5 0.8 1663 chr3L 21498834 intron Glg1 - chr3L 21499666 intron Glg1 - chr3L 21500497 intron Glg1 - chr3L_18_21495001 chr3L_21495001 RAL-307_100b 2726 chr3L 21498854 21498870 chr3L 21500468 21500496 1360 14 1644 13.5 16.5 15.0 0.9 1642 chr3L 21498854 intron Glg1 - chr3L 21499675 intron Glg1 - chr3L 21500496 intron Glg1 - chr3L_14_21495001 chr3L_21495001 RAL-307_100b 2727 chr3L 21749293 21749307 chr3L 21754478 21754492 Doc 5 5185 35.5 11.5 23.5 0.2 5199 chr3L 21749293 intron Syn1 - chr3L 21751892 intron Syn1 - chr3L 21754492 intron Syn1 - chr3L_5_21750001 chr3L_21750001 RAL-307_100b 2728 chr3L 21749309 21749329 chr3L 21754477 21754514 Doc 14 5178 17.0 11.5 14.2 0.9 5205 chr3L 21749309 intron Syn1 - chr3L 21751912 intron Syn1 - chr3L 21754514 intron Syn1 - chr3L_14_21750001 chr3L_21750001 RAL-307_100b 2729 chr3L 21749332 21749349 chr3L 21754472 21754478 Doc 17 5166 10.0 9.0 9.5 1.6 5146 chr3L 21749332 intron Syn1 - chr3L 21751905 intron Syn1 - chr3L 21754478 intron Syn1 - chr3L_17_21750001 chr3L_21750001 RAL-307_100b 2730 chr3L 21769027 21769087 chr3L 21769139 21769194 57 110 9.5 14.0 11.8 4.5 167 chr3L 21769027 intron,intron Syn1 -,CG42689 + chr3L 21769110 intron,intron Syn1 -,CG42689 + chr3L 21769194 intron,intron Syn1 -,CG42689 + chr3L_57_21765001 chr3L_21765001 RAL-307_100b 2731 chr3L 21770015 21770040 chr3L 21770127 21770149 18 111 19.0 29.0 24.0 0.7 134 chr3L 21770015 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770082 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770149 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_18_21770001 chr3L_21770001 RAL-307_100b 2732 chr3L 21776665 21776674 chr3L 21776765 21776786 4 109 17.5 12.0 14.8 0.3 121 chr3L 21776665 intron,intron CG42689 +,CG42552 + chr3L 21776726 intron,intron CG42689 +,CG42552 + chr3L 21776786 intron,intron CG42689 +,CG42552 + chr3L_4_21775001 chr3L_21775001 RAL-307_100b 2733 chr3L 21776676 21776700 chr3L 21776763 21776812 14 106 10.5 12.0 11.2 1.1 136 chr3L 21776676 intron,intron CG42689 +,CG42552 + chr3L 21776744 intron,intron CG42689 +,CG42552 + chr3L 21776812 intron,intron CG42689 +,CG42552 + chr3L_14_21775001 chr3L_21775001 RAL-307_100b 2734 chr3L 21809957 21809971 chr3L 21810065 21810084 14 110 41.0 45.0 43.0 0.3 127 chr3L 21809957 intron eg + chr3L 21810020 intron eg + chr3L 21810084 intron eg + chr3L_14_21810001 chr3L_21810001 RAL-307_100b 2735 chr3L 21836704 21836725 chr3L 21836815 21836836 12 111 27.5 12.0 19.8 0.6 132 chr3L 21836704 3` UTR P5CDh1 - chr3L 21836770 3` UTR P5CDh1 - chr3L 21836836 3` UTR P5CDh1 - chr3L_12_21835001 chr3L_21835001 RAL-307_100b 2736 chr3L 21836726 21836758 chr3L 21836810 21836869 27 108 12.0 10.5 11.2 2.2 143 chr3L 21836726 3` UTR P5CDh1 - chr3L 21836798 3` UTR P5CDh1 - chr3L 21836869 3` UTR P5CDh1 - chr3L_27_21835001 chr3L_21835001 RAL-307_100b 2737 chr3L 21849473 21849533 chr3L 21849580 21849640 67 103 13.5 15.5 14.5 4.3 167 chr3L 21849473 intron mub + chr3L 21849556 intron mub + chr3L 21849640 intron mub + chr3L_67_21845001 chr3L_21845001 RAL-307_100b 2738 chr3L 21852245 21852256 chr3L 21852349 21852368 8 110 30.0 12.0 21.0 0.4 123 chr3L 21852245 intron mub + chr3L 21852306 intron mub + chr3L 21852368 intron mub + chr3L_8_21850001 chr3L_21850001 RAL-307_100b 2739 chr3L 21852260 21852283 chr3L 21852348 21852401 46 110 17.0 11.5 14.2 3.0 141 chr3L 21852260 intron mub + chr3L 21852330 intron mub + chr3L 21852401 intron mub + chr3L_46_21850001 chr3L_21850001 RAL-307_100b 2740 chr3L 21874973 21875027 chr3L 21875155 21875209 48 181 8.5 12.5 10.5 4.2 236 chr3L 21874973 intron mub + chr3L 21875091 intron mub + chr3L 21875209 intron mub + chr3L_48_21875001 chr3L_21875001 RAL-307_100b 2741 chr3L 21901000 21901044 chr3L 21901118 21901162 47 116 17.5 22.5 20.0 2.2 162 chr3L 21901000 intron mub + chr3L 21901081 intron mub + chr3L 21901162 intron mub + chr3L_47_21900001 chr3L_21900001 RAL-307_100b 2742 chr3L 21952431 21952484 chr3L 21953194 21953252 transib1 35 764 12.0 14.5 13.2 2.5 821 chr3L 21952431 intergenic not near genes chr3L 21952842 intergenic not near genes chr3L 21953252 intergenic not near genes chr3L_35_21950001 chr3L_21950001 RAL-307_100b 2743 chr3L 22016346 22016401 chr3L 22016482 22016542 38 136 15.5 7.5 11.5 3.0 196 chr3L 22016346 intergenic not near genes chr3L 22016444 intergenic not near genes chr3L 22016542 intergenic not near genes chr3L_38_22015001 chr3L_22015001 RAL-307_100b 2744 chr3L 22033663 22033723 chr3L 22033766 22033826 60 100 15.5 14.0 14.8 3.8 163 chr3L 22033663 intergenic not near genes chr3L 22033744 intergenic not near genes chr3L 22033826 intergenic not near genes chr3L_60_22030001 chr3L_22030001 RAL-307_100b 2745 chr3L 22046158 22046213 chr3L 22046286 22046341 51 126 14.5 18.5 16.5 2.9 183 chr3L 22046158 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046341 intron Oct-TyrR + chr3L_51_22045001 chr3L_22045001 RAL-307_100b 2746 chr3L 22099653 22099657 chr3L 22105864 22105868 3S18 7 6211 46.5 18.0 32.2 0.2 6215 chr3L 22099653 intergenic not near genes chr3L 22102760 intergenic not near genes chr3L 22105868 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-307_100b 2747 chr3L 22099658 22099705 chr3L 22105863 22105900 3S18 62 6203 19.5 17.0 18.2 3.2 6242 chr3L 22099658 intergenic not near genes chr3L 22102779 intergenic not near genes chr3L 22105900 intergenic not near genes chr3L_62_22100001 chr3L_22100001 RAL-307_100b 2748 chr3L 22124923 22124977 chr3L 22125104 22125156 43 179 14.5 12.0 13.2 3.0 233 chr3L 22124923 intergenic not near genes chr3L 22125040 intergenic not near genes chr3L 22125156 intergenic not near genes chr3L_43_22125001 chr3L_22125001 RAL-307_100b 2749 chr3L 22130474 22130520 chr3L 22130645 22130691 41 168 13.5 17.5 15.5 2.5 217 chr3L 22130474 intergenic not near genes chr3L 22130582 intergenic not near genes chr3L 22130691 intergenic not near genes chr3L_41_22130001 chr3L_22130001 RAL-307_100b 2750 chr3L 22170007 22170058 chr3L 22170149 22170210 48 143 15.0 10.0 12.5 3.6 203 chr3L 22170007 intron olf413 + chr3L 22170108 intron olf413 + chr3L 22170210 intron olf413 + chr3L_48_22170001 chr3L_22170001 RAL-307_100b 2751 chr3L 22361913 22361971 chr3L 22362015 22362073 30 101 26.0 8.5 17.2 1.6 160 chr3L 22361913 intron Ten-m - chr3L 22361993 intron Ten-m - chr3L 22362073 intron Ten-m - chr3L_30_22360001 chr3L_22360001 RAL-307_100b 2752 chr3L 22395579 22395629 chr3L 22395679 22395737 45 101 13.0 11.0 12.0 3.5 158 chr3L 22395579 intron Ten-m - chr3L 22395658 intron Ten-m - chr3L 22395737 intron Ten-m - chr3L_45_22395001 chr3L_22395001 RAL-307_100b 2753 chr3L 22411344 22411399 chr3L 22411446 22411501 37 92 10.5 16.0 13.2 2.6 157 chr3L 22411344 intergenic not near genes chr3L 22411422 intergenic not near genes chr3L 22411501 intergenic not near genes chr3L_37_22410001 chr3L_22410001 RAL-307_100b 2754 chr3L 22431704 22431712 chr3L 22432294 22432302 9 590 27.5 13.5 20.5 0.4 598 chr3L 22431704 intergenic not near genes chr3L 22432003 intergenic not near genes chr3L 22432302 intergenic not near genes chr3L_9_22430001 chr3L_22430001 RAL-307_100b 2755 chr3L 22431714 22431715 chr3L 22432293 22432305 4 585 26.5 12.5 19.5 0.2 591 chr3L 22431714 intergenic not near genes chr3L 22432010 intergenic not near genes chr3L 22432305 intergenic not near genes chr3L_4_22430001 chr3L_22430001 RAL-307_100b 2756 chr3L 22522672 22522728 chr3L 22522774 22522830 62 101 16.0 19.5 17.8 3.3 158 chr3L 22522672 intergenic not near genes chr3L 22522751 intergenic not near genes chr3L 22522830 intergenic not near genes chr3L_62_22520001 chr3L_22520001 RAL-307_100b 2757 chr3L 22555745 22555802 chr3L 22563240 22563244 blood 56 7489 16.5 8.0 12.2 4.2 7499 chr3L 22555745 intergenic not near genes chr3L 22559494 intergenic not near genes chr3L 22563244 intergenic not near genes chr3L_56_22555001 chr3L_22555001 RAL-307_100b 2758 chr3L 22577598 22577612 chr3L 22582411 22582425 Doc 11 4809 40.5 16.5 28.5 0.4 4827 chr3L 22577598 intergenic not near genes chr3L 22580012 intergenic not near genes chr3L 22582425 3` UTR CG14459 - chr3L_11_22580001 chr3L_22580001 RAL-307_100b 2759 chr3L 22577613 22577625 chr3L 22582410 22582411 Doc 14 4803 30.0 16.0 23.0 0.6 4798 chr3L 22577613 intergenic not near genes chr3L 22580012 intergenic not near genes chr3L 22582411 3` UTR CG14459 - chr3L_14_22580001 chr3L_22580001 RAL-307_100b 2760 chr3L 22577628 22577637 chr3L 22582409 22582450 Doc 17 4807 21.5 16.0 18.8 0.9 4822 chr3L 22577628 intergenic not near genes chr3L 22580039 intergenic not near genes chr3L 22582450 3` UTR CG14459 - chr3L_17_22580001 chr3L_22580001 RAL-307_100b 2761 chr3L 22577638 22577651 chr3L 22582406 22582419 Doc 15 4795 14.5 15.0 14.8 0.9 4781 chr3L 22577638 intergenic not near genes chr3L 22580028 intergenic not near genes chr3L 22582419 3` UTR CG14459 - chr3L_15_22580001 chr3L_22580001 RAL-307_100b 2762 chr3L 22587187 22587245 chr3L 22587309 22587367 52 120 13.0 13.5 13.2 3.7 180 chr3L 22587187 intron CG14459 - chr3L 22587277 intron CG14459 - chr3L 22587367 intron CG14459 - chr3L_52_22585001 chr3L_22585001 RAL-307_100b 2763 chr3L 22617163 22617222 chr3L 22624640 22624691 blood 47 7473 18.5 13.5 16.0 2.8 7528 chr3L 22617163 intron CG14459 - chr3L 22620927 intron CG14459 - chr3L 22624691 intron CG14459 - chr3L_47_22620001 chr3L_22620001 RAL-307_100b 2764 chr3L 22659034 22659046 chr3L 22659137 22659147 8 103 23.0 27.0 25.0 0.3 113 chr3L 22659034 intergenic not near genes chr3L 22659090 intergenic not near genes chr3L 22659147 intergenic not near genes chr3L_8_22655001 chr3L_22655001 RAL-307_100b 2765 chr3L 22659048 22659089 chr3L 22659136 22659191 29 100 12.0 26.5 19.2 1.4 143 chr3L 22659048 intergenic not near genes chr3L 22659120 intergenic not near genes chr3L 22659191 intergenic not near genes chr3L_29_22655001 chr3L_22655001 RAL-307_100b 2766 chr3L 22797315 22797326 chr3L 22797425 22797443 9 116 32.5 17.5 25.0 0.3 128 chr3L 22797315 3` UTR jim - chr3L 22797379 3` UTR jim - chr3L 22797443 3` UTR jim - chr3L_9_22795001 chr3L_22795001 RAL-307_100b 2767 chr3L 22797327 22797368 chr3L 22797422 22797480 49 112 13.0 15.0 14.0 3.3 153 chr3L 22797327 3` UTR jim - chr3L 22797404 3` UTR jim - chr3L 22797480 3` UTR jim - chr3L_49_22795001 chr3L_22795001 RAL-307_100b 2768 chr3L 22853441 22853723 chr3L 22853552 22853795 112 109 12.5 25.0 18.8 5.7 354 chr3L 22853441 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853618 5` UTR CR43426 + chr3L 22853795 5` UTR CR43426 + chr3L_112_22850001 chr3L_22850001 RAL-307_100b 2769 chr3L 22865964 22866010 chr3L 22867122 22867148 Doc 45 1155 17.0 13.5 15.2 2.8 1184 chr3L 22865964 intron CG33170 + chr3L 22866556 intron CG33170 + chr3L 22867148 intron CG33170 + chr3L_45_22865001 chr3L_22865001 RAL-307_100b 2770 chr3L 9307795 9307796 chr3L 22908066 22908066 6 13600271 65.5 78.0 71.8 0.1 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_6_16105001 chr3L_16105001 RAL-307_100b 2771 chr3L 19220633 19220638 chr3L 22908066 22908066 94 3687431 84.5 78.0 81.2 1.1 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_94_21060001 chr3L_21060001 RAL-307_100b 2772 chr3L 20525228 20525229 chr3L 22908066 22908066 11 2382837 55.5 78.0 66.8 0.2 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_11_21715001 chr3L_21715001 RAL-307_100b 2773 chr3L 22908066 22908066 chr3L 24821492 24821495 22 1913428 79.5 47.0 63.2 0.3 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_22_23860001 chr3L_23860001 RAL-307_100b 2774 chr3L 19220633 19220637 chr3L 22908067 22908067 63 3687432 84.0 79.0 81.5 0.8 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_63_21060001 chr3L_21060001 RAL-307_100b 2775 chr3L 20525230 20525230 chr3L 22908067 22908067 5 2382837 55.5 79.0 67.2 0.1 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-307_100b 2776 chr3L 22908067 22908068 chr3L 24821492 24821492 18 1913426 79.5 47.0 63.2 0.3 1913425 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821492 intergenic not near genes chr3L_18_23860001 chr3L_23860001 RAL-307_100b 2777 chr3L 22936688 22936746 chr3L 22938127 22938185 45 1447 132.5 117.0 124.8 0.4 1497 chr3L 22936688 intergenic not near genes chr3L 22937436 intergenic not near genes chr3L 22938185 intergenic not near genes chr3L_45_22935001 chr3L_22935001 RAL-307_100b 2778 chr3L 22980566 22980590 chr3L 22980676 22980699 25 107 14.0 25.5 19.8 1.2 133 chr3L 22980566 intergenic not near genes chr3L 22980632 intergenic not near genes chr3L 22980699 intergenic not near genes chr3L_25_22980001 chr3L_22980001 RAL-307_100b 2779 chr3L 22980591 22980596 chr3L 22980661 22980694 4 94 12.5 18.0 15.2 0.2 103 chr3L 22980591 intergenic not near genes chr3L 22980642 intergenic not near genes chr3L 22980694 intergenic not near genes chr3L_4_22980001 chr3L_22980001 RAL-307_100b 2780 chr3L 22982452 22982481 chr3L 22982875 22982904 INE-1 30 421 14.5 32.0 23.2 1.2 452 chr3L 22982452 intergenic not near genes chr3L 22982678 intergenic not near genes chr3L 22982904 intergenic not near genes chr3L_30_22980001 chr3L_22980001 RAL-307_100b 2781 chr3L 22989839 22989854 chr3L 22996838 22996853 297 18 6997 41.0 19.0 30.0 0.6 7014 chr3L 22989839 intergenic not near genes chr3L 22993346 intergenic not near genes chr3L 22996853 intergenic not near genes chr3L_18_22990001 chr3L_22990001 RAL-307_100b 2782 chr3L 22989855 22989895 chr3L 22996835 22996884 297 47 6994 18.0 17.5 17.8 2.5 7029 chr3L 22989855 intergenic not near genes chr3L 22993370 intergenic not near genes chr3L 22996884 intergenic not near genes chr3L_47_22990001 chr3L_22990001 RAL-307_100b 2783 chr3L 23008174 23008179 chr3L 23008275 23008280 5 101 38.0 18.0 28.0 0.2 106 chr3L 23008174 intron nrm + chr3L 23008227 intron nrm + chr3L 23008280 intron nrm + chr3L_5_23005001 chr3L_23005001 RAL-307_100b 2784 chr3L 23008180 23008226 chr3L 23008274 23008327 46 100 13.0 17.0 15.0 2.9 147 chr3L 23008180 intron nrm + chr3L 23008254 intron nrm + chr3L 23008327 intron nrm + chr3L_46_23005001 chr3L_23005001 RAL-307_100b 2785 chr3L 22753753 22753753 chr3L 23027560 23027566 INE-1 5 273808 68.0 40.5 54.2 0.1 273813 chr3L 22753753 intron SPoCk + chr3L 22890660 intron slif + chr3L 23027566 intron nrm + chr3L_5_22890001 chr3L_22890001 RAL-307_100b 2786 chr3L 23042202 23042248 chr3L 23048979 23049026 gypsy6 37 6776 22.0 19.5 20.8 1.7 6824 chr3L 23042202 intergenic not near genes chr3L 23045614 intergenic not near genes chr3L 23049026 intergenic not near genes chr3L_37_23045001 chr3L_23045001 RAL-307_100b 2787 chr3L 23042250 23042258 chr3L 23048978 23049011 gypsy6 8 6767 14.0 18.5 16.2 0.5 6761 chr3L 23042250 intergenic not near genes chr3L 23045630 intergenic not near genes chr3L 23049011 intergenic not near genes chr3L_8_23045001 chr3L_23045001 RAL-307_100b 2788 chr3L 23062869 23062884 chr3L 25074004 25074007 Tirant 12 2011133 50.0 53.0 51.5 0.2 2011138 chr3L 23062869 intergenic not near genes chr3L 24068438 intergenic not near genes chr3L 25074007 intergenic not near genes chr3L_12_24065001 chr3L_24065001 RAL-307_100b 2789 chr3L 23101258 23101308 chr3L 23101494 23101539 36 233 20.5 0.0 10.2 3.2 281 chr3L 23101258 intron CkIIalpha + chr3L 23101398 intron CkIIalpha + chr3L 23101539 intron CkIIalpha + chr3L_36_23100001 chr3L_23100001 RAL-307_100b 2790 chr3L 23182237 23182262 chr3L 23182376 23182401 27 137 31.0 20.0 25.5 1.0 164 chr3L 23182237 intron CG34031 + chr3L 23182319 intron CG34031 + chr3L 23182401 intron CG34031 + chr3L_27_23180001 chr3L_23180001 RAL-307_100b 2791 chr3L 23182264 23182295 chr3L 23182373 23182433 31 129 14.0 16.0 15.0 1.9 169 chr3L 23182264 intron CG34031 + chr3L 23182348 intron CG34031 + chr3L 23182433 intron CG34031 + chr3L_31_23180001 chr3L_23180001 RAL-307_100b 2792 chr3L 23205428 23205453 chr3L 23205683 23205708 23 254 23.0 15.0 19.0 1.1 280 chr3L 23205428 intergenic not near genes chr3L 23205568 intergenic not near genes chr3L 23205708 intergenic not near genes chr3L_23_23205001 chr3L_23205001 RAL-307_100b 2793 chr3L 23239789 23239812 chr3L 23240304 23240327 11 514 3.5 14.0 8.8 1.1 538 chr3L 23239789 intron nAChRalpha4 + chr3L 23240058 intron nAChRalpha4 + chr3L 23240327 intron nAChRalpha4 + chr3L_11_23240001 chr3L_23240001 RAL-307_100b 2794 chr3L 23402274 23402294 chr3L 23402382 23402402 15 105 41.5 16.5 29.0 0.5 128 chr3L 23402274 intergenic not near genes chr3L 23402338 intergenic not near genes chr3L 23402402 intergenic not near genes chr3L_15_23400001 chr3L_23400001 RAL-307_100b 2795 chr3L 23402296 23402319 chr3L 23402378 23402427 17 98 18.5 15.0 16.8 1.0 131 chr3L 23402296 intergenic not near genes chr3L 23402362 intergenic not near genes chr3L 23402427 intergenic not near genes chr3L_17_23400001 chr3L_23400001 RAL-307_100b 2796 chr3L 23665512 23665529 chr3L 23665624 23665644 gypsy8 20 114 93.5 104.5 99.0 0.2 132 chr3L 23665512 intron AGO3 + chr3L 23665578 intron AGO3 + chr3L 23665644 intron AGO3 + chr3L_20_23665001 chr3L_23665001 RAL-307_100b 2797 chr3L 23848814 23848834 chr3L 23849663 23849679 R1A1-element 21 847 23.5 21.0 22.2 0.9 865 chr3L 23848814 intron CG40470 - chr3L 23849246 intron CG40470 - chr3L 23849679 intron CG40470 - chr3L_21_23845001 chr3L_23845001 RAL-307_100b 2798 chr3L 23875505 23875558 chr3L 23875606 23875614 45 101 13.0 11.0 12.0 3.5 109 chr3L 23875505 intron CG40470 - chr3L 23875560 intron CG40470 - chr3L 23875614 intron CG40470 - chr3L_45_23875001 chr3L_23875001 RAL-307_100b 2799 chr3L 24012388 24012400 chr3L 24020754 24020766 roo 12 8366 23.5 18.5 21.0 0.5 8378 chr3L 24012388 intergenic not near genes chr3L 24016577 intergenic not near genes chr3L 24020766 intergenic not near genes chr3L_12_24015001 chr3L_24015001 RAL-307_100b 2800 chr3L 24012402 24012432 chr3L 24020747 24020793 roo 27 8362 15.5 15.0 15.2 1.7 8391 chr3L 24012402 intergenic not near genes chr3L 24016598 intergenic not near genes chr3L 24020793 intergenic not near genes chr3L_27_24015001 chr3L_24015001 RAL-307_100b 2801 chr3L 24150007 24150014 chr3L 24150080 24150087 6 73 67.0 59.0 63.0 0.1 80 chr3L 24150007 intron Snap25 + chr3L 24150047 intron Snap25 + chr3L 24150087 intron Snap25 + chr3L_6_24150001 chr3L_24150001 RAL-307_100b 2802 chr3L 24168763 24168812 chr3L 24176116 24176161 ZAM 50 7348 24.0 22.0 23.0 2.1 7398 chr3L 24168763 intron Snap25 + chr3L 24172462 intron Snap25 + chr3L 24176161 intron Snap25 + chr3L_50_24170001 chr3L_24170001 RAL-307_100b 2803 chr3L 24168817 24168822 chr3L 24176115 24176175 ZAM 13 7340 17.5 21.0 19.2 0.6 7358 chr3L 24168817 intron Snap25 + chr3L 24172496 intron Snap25 + chr3L 24176175 intron Snap25 + chr3L_13_24170001 chr3L_24170001 RAL-307_100b 2804 chr3L 24731762 24731773 chr3L 24731864 24731875 4 102 28.5 11.0 19.8 0.2 113 chr3L 24731762 intron scro + chr3L 24731818 intron scro + chr3L 24731875 intron scro + chr3L_4_24730001 chr3L_24730001 RAL-307_100b 2805 chr3L 24791870 24791918 chr3L 24796674 24796714 Doc 30 4802 12.5 10.0 11.2 2.5 4844 chr3L 24791870 intergenic not near genes chr3L 24794292 intergenic not near genes chr3L 24796714 intergenic not near genes chr3L_30_24790001 chr3L_24790001 RAL-307_100b 2806 chr3L 18198930 18198931 chr3L 24821492 24821492 5 6622562 0.5 47.0 23.8 0.2 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_5_21510001 chr3L_21510001 RAL-307_100b 2807 chr3L 20525228 20525228 chr3L 24821493 24821493 4 4296265 55.5 48.0 51.8 0.1 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-307_100b 2808 chr3L 18198930 18198931 chr3L 24821494 24821494 7 6622563 0.5 48.5 24.5 0.3 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-307_100b 2809 chr3L 25331611 25331653 chr3L 25331727 25331769 23 110 17.5 13.0 15.2 1.4 158 chr3L 25331611 intergenic not near genes chr3L 25331690 intergenic not near genes chr3L 25331769 intergenic not near genes chr3L_23_25330001 chr3L_25330001 RAL-307_100b 2810 chr3L 25464012 25464087 chr3L 25464108 25464199 32 102 12.5 12.0 12.2 2.4 187 chr3L 25464012 intergenic not near genes chr3L 25464106 intergenic not near genes chr3L 25464199 intergenic not near genes chr3L_32_25460001 chr3L_25460001 RAL-307_100b 2811 chr3L 25512797 25512808 chr3L 25512870 25512895 5 91 9.5 13.5 11.5 0.4 98 chr3L 25512797 intron CG41343 - chr3L 25512846 intron CG41343 - chr3L 25512895 intron CG41343 - chr3L_5_25510001 chr3L_25510001 RAL-307_100b 2812 chr3L 25513558 25513581 chr3L 25513657 25513685 20 102 21.5 18.5 20.0 1.0 127 chr3L 25513558 intron CG41343 - chr3L 25513622 intron CG41343 - chr3L 25513685 intron CG41343 - chr3L_20_25510001 chr3L_25510001 RAL-307_100b 2813 chr3L 25513582 25513609 chr3L 25513656 25513713 33 95 12.0 18.0 15.0 2.1 131 chr3L 25513582 intron CG41343 - chr3L 25513648 intron CG41343 - chr3L 25513713 intron CG41343 - chr3L_33_25510001 chr3L_25510001 RAL-307_100b 2814 chr3L 25627829 25627834 chr3L 25627909 25627940 4 102 13.0 19.5 16.2 0.2 111 chr3L 25627829 intron CG41343 - chr3L 25627884 intron CG41343 - chr3L 25627940 intron CG41343 - chr3L_4_25625001 chr3L_25625001 RAL-307_100b 2815 chr3L 25628491 25628519 chr3L 25633269 25633315 F-element 33 4790 16.0 12.0 14.0 2.2 4824 chr3L 25628491 intron CG41343 - chr3L 25630903 intron CG41343 - chr3L 25633315 intron CG41343 - chr3L_33_25630001 chr3L_25630001 RAL-307_100b 2816 chr3L 25824653 25824674 chr3L 27273495 27273499 F-element 13 1448838 46.0 66.0 56.0 0.2 1448846 chr3L 25824653 intron CG40178 - chr3L 26549076 intergenic not near genes chr3L 27273499 intergenic not near genes chr3L_13_26545001 chr3L_26545001 RAL-307_100b 2817 chr3L 25842485 25842501 chr3L 25842571 25842612 15 108 15.5 12.5 14.0 1.0 127 chr3L 25842485 intron CG40178 - chr3L 25842548 intron CG40178 - chr3L 25842612 intron CG40178 - chr3L_15_25840001 chr3L_25840001 RAL-307_100b 2818 chr3L 26009409 26009454 chr3L 26009515 26009555 35 109 15.5 6.5 11.0 2.9 146 chr3L 26009409 intron CG40178 - chr3L 26009482 intron CG40178 - chr3L 26009555 intron CG40178 - chr3L_35_26005001 chr3L_26005001 RAL-307_100b 2819 chr3L 6844557 6844561 chr3L 26010044 26010048 5 19165487 41.0 68.5 54.8 0.1 19165491 chr3L 6844557 intergenic not near genes chr3L 16427302 intron,intron CG33158 +,dsx-c73A - chr3L 26010048 intron CG40178 - chr3L_5_16425001 chr3L_16425001 RAL-307_100b 2820 chr3L 26026696 26026749 chr3L 26026811 26026864 17 111 78.0 74.0 76.0 0.2 168 chr3L 26026696 intergenic not near genes chr3L 26026780 intergenic not near genes chr3L 26026864 intergenic not near genes chr3L_17_26025001 chr3L_26025001 RAL-307_100b 2821 chr3L 26694908 26694921 chr3L 26695008 26695011 8 100 25.0 12.5 18.8 0.4 103 chr3L 26694908 intergenic not near genes chr3L 26694960 intergenic not near genes chr3L 26695011 intergenic not near genes chr3L_8_26690001 chr3L_26690001 RAL-307_100b 2822 chr3L 26694922 26694956 chr3L 26695007 26695011 23 90 11.0 13.0 12.0 1.8 89 chr3L 26694922 intergenic not near genes chr3L 26694966 intergenic not near genes chr3L 26695011 intergenic not near genes chr3L_23_26690001 chr3L_26690001 RAL-307_100b 2823 chr3L 23941244 23941245 chr3L 26882298 26882299 1360 5 2941054 57.5 6.5 32.0 0.2 2941055 chr3L 23941244 intron CG40470 - chr3L 25411772 intergenic not near genes chr3L 26882299 intergenic not near genes chr3L_5_25410001 chr3L_25410001 RAL-307_100b 2824 chr3L 27172781 27172786 chr3L 27172908 27172913 5 127 77.5 76.0 76.8 0.1 132 chr3L 27172781 intergenic not near genes chr3L 27172847 intergenic not near genes chr3L 27172913 intergenic not near genes chr3L_5_27170001 chr3L_27170001 RAL-307_100b 2825 chr3L 10369786 10369787 chr3L 27269744 27269757 4 16899961 65.5 34.0 49.8 0.1 16899971 chr3L 10369786 intergenic not near genes chr3L 18819772 5` UTR CG14073 - chr3L 27269757 intergenic not near genes chr3L_4_18815001 chr3L_18815001 RAL-307_100b 2826 chr3L 27356090 27356107 chr3L 27357314 27357331 1360 18 1223 17.0 8.0 12.5 1.3 1241 chr3L 27356090 intron Dbp80 + chr3L 27356710 intron Dbp80 + chr3L 27357331 intron Dbp80 + chr3L_18_27355001 chr3L_27355001 RAL-307_100b 2827 chr3L 27368857 27368873 chr3L 27369423 27369443 20 568 31.0 5.5 18.2 1.0 586 chr3L 27368857 intron Dbp80 + chr3L 27369150 intron Dbp80 + chr3L 27369443 intron Dbp80 + chr3L_20_27365001 chr3L_27365001 RAL-307_100b 2828 chr3L 27368874 27368910 chr3L 27369422 27369465 26 563 12.5 5.0 8.8 2.7 591 chr3L 27368874 intron Dbp80 + chr3L 27369170 intron Dbp80 + chr3L 27369465 intron Dbp80 + chr3L_26_27365001 chr3L_27365001 RAL-307_100b 2829 chr3L 27383198 27383204 chr3L 27383368 27383374 4 170 85.5 49.0 67.2 0.1 176 chr3L 27383198 intron Dbp80 + chr3L 27383286 intron Dbp80 + chr3L 27383374 intron Dbp80 + chr3L_4_27380001 chr3L_27380001 RAL-307_100b 2830 chr3L 27390432 27390435 chr3L 27390678 27390681 4 246 89.0 109.0 99.0 0.0 249 chr3L 27390432 intron Dbp80 + chr3L 27390556 intron Dbp80 + chr3L 27390681 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-307_100b 2831 chr3L 27390437 27390712 chr3L 27390672 27390816 36 110 99.5 108.0 103.8 0.3 379 chr3L 27390437 intron Dbp80 + chr3L 27390626 intron Dbp80 + chr3L 27390816 intron Dbp80 + chr3L_36_27390001 chr3L_27390001 RAL-307_100b 2832 chr3L 27714773 27714826 chr3L 27714891 27714944 42 112 7.0 11.5 9.2 4.1 171 chr3L 27714773 intergenic not near genes chr3L 27714858 intergenic not near genes chr3L 27714944 intergenic not near genes chr3L_42_27710001 chr3L_27710001 RAL-307_100b 2833 chr3L 27727618 27727636 chr3L 27728750 27728760 G-element 10 1130 21.0 15.0 18.0 0.5 1142 chr3L 27727618 intergenic not near genes chr3L 27728189 intergenic not near genes chr3L 27728760 intergenic not near genes chr3L_10_27725001 chr3L_27725001 RAL-307_100b 2834 chr3L 27728797 27728818 chr3L 27728930 27728963 7 155 7.0 15.0 11.0 0.6 166 chr3L 27728797 intergenic not near genes chr3L 27728880 intergenic not near genes chr3L 27728963 intergenic not near genes chr3L_7_27725001 chr3L_27725001 RAL-307_100b 2835 chr3L 27968970 27968970 chr3L 27972340 27972370 5 3387 73.5 80.5 77.0 0.1 3400 chr3L 27968970 exon CG17514 - chr3L 27970670 exon CG17514 - chr3L 27972370 exon CG17514 - chr3L_5_27970001 chr3L_27970001 RAL-307_100b 2836 chr3L 27968972 27968977 chr3L 27972334 27972368 11 3398 74.0 80.0 77.0 0.1 3396 chr3L 27968972 exon CG17514 - chr3L 27970670 exon CG17514 - chr3L 27972368 exon CG17514 - chr3L_11_27970001 chr3L_27970001 RAL-307_100b 2837 chr3L 27967532 27967578 chr3L 27971671 27971717 44 4141 98.5 101.5 100.0 0.4 4185 chr3L 27967532 exon CG17514 - chr3L 27969624 exon CG17514 - chr3L 27971717 exon CG17514 - chr3L_44_27965001 chr3L_27965001 RAL-307_100b 2838 chr3L 27972698 27972867 chr3L 27972815 27972959 51 110 64.5 62.5 63.5 0.8 261 chr3L 27972698 exon CG17514 - chr3L 27972828 exon CG17514 - chr3L 27972959 exon CG17514 - chr3L_51_27970001 chr3L_27970001 RAL-307_100b 2839 chr3L 27971584 27971634 chr3L 27972889 27972964 29 1329 102.0 64.5 83.2 0.3 1380 chr3L 27971584 exon CG17514 - chr3L 27972274 exon CG17514 - chr3L 27972964 exon CG17514 - chr3L_29_27970001 chr3L_27970001 RAL-307_100b 2840 chr3L 27980671 27980731 chr3L 27985494 27985554 Doc 35 4821 10.5 12.5 11.5 2.8 4883 chr3L 27980671 intron CG17514 - chr3L 27983112 intron CG17514 - chr3L 27985554 intron CG17514 - chr3L_35_27980001 chr3L_27980001 RAL-307_100b 2841 chr3R 98954 98955 chr3R 109521 109522 5 10567 0.0 0.5 0.2 4.2 10568 chr3R 98954 intergenic not near genes chr3R 104238 intergenic not near genes chr3R 109522 intergenic not near genes chr3R_5_100001 chr3R_100001 RAL-307_100b 2842 chr3R 444024 444074 chr3R 444131 444156 18 98 45.5 45.0 45.2 0.4 132 chr3R 444024 intergenic not near genes chr3R 444090 intergenic not near genes chr3R 444156 intergenic not near genes chr3R_18_440001 chr3R_440001 RAL-307_100b 2843 chr3R 1021764 1021820 chr3R 1021993 1022049 37 232 92.5 89.5 91.0 0.4 285 chr3R 1021764 intergenic not near genes chr3R 1021906 intergenic not near genes chr3R 1022049 intergenic not near genes chr3R_37_1020001 chr3R_1020001 RAL-307_100b 2844 chr3R 1062365 1062414 chr3R 1062548 1062596 16 183 8.5 9.0 8.8 1.6 231 chr3R 1062365 intron CG15831 + chr3R 1062480 intron CG15831 + chr3R 1062596 intron CG15831 + chr3R_16_1060001 chr3R_1060001 RAL-307_100b 2845 chr3R 1252449 1252460 chr3R 1252571 1252571 4 116 47.5 60.0 53.8 0.1 122 chr3R 1252449 intergenic not near genes chr3R 1252510 intergenic not near genes chr3R 1252571 intergenic not near genes chr3R_4_1250001 chr3R_1250001 RAL-307_100b 2846 chr3R 1252409 1252451 chr3R 1266230 1266237 297 9 13797 45.5 41.0 43.2 0.2 13828 chr3R 1252409 intergenic not near genes chr3R 1259323 intergenic not near genes chr3R 1266237 intergenic not near genes chr3R_9_1255001 chr3R_1255001 RAL-307_100b 2847 chr3R 1443409 1443461 chr3R 1443510 1443566 24 99 7.5 8.0 7.8 2.7 157 chr3R 1443409 intron CG40155 + chr3R 1443488 intron CG40155 + chr3R 1443566 intron CG40155 + chr3R_24_1440001 chr3R_1440001 RAL-307_100b 2848 chr3R 1521168 1521183 chr3R 1521241 1521296 32 103 50.5 40.5 45.5 0.7 128 chr3R 1521168 intergenic not near genes chr3R 1521232 intergenic not near genes chr3R 1521296 intergenic not near genes chr3R_32_1520001 chr3R_1520001 RAL-307_100b 2849 chr3R 1867061 1867063 chr3R 1867170 1867172 4 109 123.5 94.0 108.8 0.0 111 chr3R 1867061 intron CG42623 + chr3R 1867116 intron CG42623 + chr3R 1867172 intron CG42623 + chr3R_4_1865001 chr3R_1865001 RAL-307_100b 2850 chr3R 1867064 1867073 chr3R 1867168 1867170 6 105 125.0 93.5 109.2 0.1 106 chr3R 1867064 intron CG42623 + chr3R 1867117 intron CG42623 + chr3R 1867170 intron CG42623 + chr3R_6_1865001 chr3R_1865001 RAL-307_100b 2851 chr3R 1867172 1867174 chr3R 1954917 1954922 Doc3-element 4 87748 86.5 47.0 66.8 0.1 87750 chr3R 1867172 intron CG42623 + chr3R 1911047 intron CG42623 + chr3R 1954922 intergenic not near genes chr3R_4_1910001 chr3R_1910001 RAL-307_100b 2852 chr3R 1867036 1867043 chr3R 1869932 1869941 5 2896 124.0 64.0 94.0 0.1 2905 chr3R 1867036 intron CG42623 + chr3R 1868488 intron CG42623 + chr3R 1869941 intron CG42623 + chr3R_5_1865001 chr3R_1865001 RAL-307_100b 2853 chr3R 1939024 1939082 chr3R 1939143 1939201 34 116 9.0 7.0 8.0 3.8 177 chr3R 1939024 intergenic not near genes chr3R 1939112 intergenic not near genes chr3R 1939201 intergenic not near genes chr3R_34_1935001 chr3R_1935001 RAL-307_100b 2854 chr3R 1953138 1953187 chr3R 1958540 1958554 Cr1a 10 5370 65.5 63.5 64.5 0.2 5416 chr3R 1953138 intergenic not near genes chr3R 1955846 intergenic not near genes chr3R 1958554 intergenic not near genes chr3R_10_1955001 chr3R_1955001 RAL-307_100b 2855 chr3R 1511855 1511855 chr3R 2516753 2516756 297 5 1004897 32.0 75.0 53.5 0.1 1004901 chr3R 1511855 intergenic not near genes chr3R 2014306 intergenic not near genes chr3R 2516756 intergenic not near genes chr3R_5_2010001 chr3R_2010001 RAL-307_100b 2856 chr3R 1511854 1511857 chr3R 2516759 2516781 297 6 1004910 32.5 76.0 54.2 0.1 1004927 chr3R 1511854 intergenic not near genes chr3R 2014318 intergenic not near genes chr3R 2516781 intergenic not near genes chr3R_6_2010001 chr3R_2010001 RAL-307_100b 2857 chr3R 2534111 2534142 chr3R 2541704 2541736 16 7590 69.0 48.0 58.5 0.3 7625 chr3R 2534111 intergenic not near genes chr3R 2537924 intergenic not near genes chr3R 2541736 intergenic not near genes chr3R_16_2535001 chr3R_2535001 RAL-307_100b 2858 chr3R 2534143 2534164 chr3R 2541700 2541725 17 7582 51.5 48.5 50.0 0.3 7582 chr3R 2534143 intergenic not near genes chr3R 2537934 intergenic not near genes chr3R 2541725 intergenic not near genes chr3R_17_2535001 chr3R_2535001 RAL-307_100b 2859 chr3R 1446700 1446700 chr3R 2999354 2999354 invader2 4 1552654 31.5 46.0 38.8 0.1 1552654 chr3R 1446700 intron CG40155 + chr3R 2223027 intergenic not near genes chr3R 2999354 intron CG42618 - chr3R_4_2220001 chr3R_2220001 RAL-307_100b 2860 chr3R 3178696 3178714 chr3R 3595185 3595223 14 416497 38.5 79.0 58.8 0.2 416527 chr3R 3178696 intron CG42617 - chr3R 3386960 intergenic not near genes chr3R 3595223 intergenic not near genes chr3R_14_3385001 chr3R_3385001 RAL-307_100b 2861 chr3R 3267251 3267301 chr3R 3267407 3267457 19 161 77.5 78.5 78.0 0.2 206 chr3R 3267251 intergenic not near genes chr3R 3267354 intergenic not near genes chr3R 3267457 intergenic not near genes chr3R_19_3265001 chr3R_3265001 RAL-307_100b 2862 chr3R 3752715 3752733 chr3R 3752823 3752841 14 106 27.0 17.0 22.0 0.6 126 chr3R 3752715 intergenic CG41128 + chr3R 3752778 intergenic CG41128 + chr3R 3752841 intergenic CG41128 + chr3R_14_3750001 chr3R_3750001 RAL-307_100b 2863 chr3R 3752734 3752761 chr3R 3752822 3752869 19 103 12.5 16.5 14.5 1.2 135 chr3R 3752734 intergenic CG41128 + chr3R 3752802 intergenic CG41128 + chr3R 3752869 intergenic not near genes chr3R_19_3750001 chr3R_3750001 RAL-307_100b 2864 chr3R 3848037 3848052 chr3R 3848161 3848178 13 125 12.5 13.5 13.0 0.9 141 chr3R 3848037 intron CG41099 + chr3R 3848108 intron CG41099 + chr3R 3848178 intron CG41099 + chr3R_13_3845001 chr3R_3845001 RAL-307_100b 2865 chr3R 3916183 3916212 chr3R 3916315 3916338 5 131 50.5 39.5 45.0 0.1 155 chr3R 3916183 intergenic not near genes chr3R 3916260 intergenic not near genes chr3R 3916338 intergenic not near genes chr3R_5_3915001 chr3R_3915001 RAL-307_100b 2866 chr3R 4063784 4063815 chr3R 4069089 4069093 21 5301 19.5 50.5 35.0 0.6 5309 chr3R 4063784 intergenic not near genes chr3R 4066438 intergenic not near genes chr3R 4069093 intergenic not near genes chr3R_21_4065001 chr3R_4065001 RAL-307_100b 2867 chr3R 3989283 3989294 chr3R 4068939 4068951 mdg1 9 79648 49.5 45.0 47.2 0.2 79668 chr3R 3989283 intergenic not near genes chr3R 4029117 intergenic not near genes chr3R 4068951 intergenic not near genes chr3R_9_4025001 chr3R_4025001 RAL-307_100b 2868 chr3R 4105017 4105065 chr3R 4110246 4110294 copia 19 5227 10.5 9.0 9.8 1.8 5277 chr3R 4105017 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110294 intergenic not near genes chr3R_19_4105001 chr3R_4105001 RAL-307_100b 2869 chr3R 4206046 4206101 chr3R 4211646 4211701 mdg3 49 5596 12.0 9.0 10.5 4.3 5655 chr3R 4206046 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211701 intron CG14636 - chr3R_49_4205001 chr3R_4205001 RAL-307_100b 2870 chr3R 4249912 4249969 chr3R 4250020 4250077 62 99 13.5 15.0 14.2 4.1 165 chr3R 4249912 exon TwdlG - chr3R 4249994 5` UTR TwdlG - chr3R 4250077 5` UTR TwdlG - chr3R_62_4245001 chr3R_4245001 RAL-307_100b 2871 chr3R 4250909 4250960 chr3R 4251025 4251065 31 114 22.0 17.5 19.8 1.5 156 chr3R 4250909 5` UTR TwdlG - chr3R 4250987 5` UTR TwdlG - chr3R 4251065 5` UTR TwdlG - chr3R_31_4250001 chr3R_4250001 RAL-307_100b 2872 chr3R 4366733 4366745 chr3R 4375141 4375151 roo 12 8407 31.5 17.0 24.2 0.5 8418 chr3R 4366733 3` UTR CG1090 + chr3R 4370942 intergenic not near genes chr3R 4375151 5` UTR CR44922 + chr3R_12_4370001 chr3R_4370001 RAL-307_100b 2873 chr3R 4366747 4366788 chr3R 4375138 4375196 roo 44 8404 17.0 15.5 16.2 2.6 8449 chr3R 4366747 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375196 5` UTR CR44922 + chr3R_44_4370001 chr3R_4370001 RAL-307_100b 2874 chr3R 4376538 4376576 chr3R 4377012 4377050 30 471 11.0 11.0 11.0 2.5 512 chr3R 4376538 5` UTR CR44922 + chr3R 4376794 5` UTR CR44922 + chr3R 4377050 5` UTR CR44922 + chr3R_30_4375001 chr3R_4375001 RAL-307_100b 2875 chr3R 4408388 4408418 chr3R 4412717 4412747 Juan 27 4328 30.0 20.0 25.0 1.0 4359 chr3R 4408388 intron CG32944 - chr3R 4410568 intron CG32944 - chr3R 4412747 intron CG32944 - chr3R_27_4410001 chr3R_4410001 RAL-307_100b 2876 chr3R 4408419 4408435 chr3R 4412715 4412764 Juan 19 4323 23.0 19.5 21.2 0.9 4345 chr3R 4408419 intron CG32944 - chr3R 4410592 intron CG32944 - chr3R 4412764 intron CG32944 - chr3R_19_4410001 chr3R_4410001 RAL-307_100b 2877 chr3R 4420778 4420835 chr3R 4420879 4420935 55 99 19.0 10.5 14.8 3.5 157 chr3R 4420778 intergenic not near genes chr3R 4420856 intergenic not near genes chr3R 4420935 intergenic not near genes chr3R_55_4420001 chr3R_4420001 RAL-307_100b 2878 chr3R 4480042 4480059 chr3R 4480168 4480174 8 123 33.5 38.0 35.8 0.2 132 chr3R 4480042 intergenic not near genes chr3R 4480108 intergenic not near genes chr3R 4480174 intergenic not near genes chr3R_8_4480001 chr3R_4480001 RAL-307_100b 2879 chr3R 4538901 4538904 chr3R 4540186 4540188 1360 4 1284 9.5 28.0 18.8 0.2 1287 chr3R 4538901 intron CG34357 - chr3R 4539544 intron CG34357 - chr3R 4540188 intron CG34357 - chr3R_4_4535001 chr3R_4535001 RAL-307_100b 2880 chr3R 4609524 4609535 chr3R 4610713 4610724 1360 13 1189 45.0 18.0 31.5 0.4 1200 chr3R 4609524 intergenic not near genes chr3R 4610124 intergenic not near genes chr3R 4610724 intergenic not near genes chr3R_13_4610001 chr3R_4610001 RAL-307_100b 2881 chr3R 4609537 4609578 chr3R 4610710 4610767 1360 42 1183 18.0 17.0 17.5 2.3 1230 chr3R 4609537 intergenic not near genes chr3R 4610152 intergenic not near genes chr3R 4610767 intergenic not near genes chr3R_42_4610001 chr3R_4610001 RAL-307_100b 2882 chr3R 4657259 4657267 chr3R 4657584 4657586 5 326 14.5 33.5 24.0 0.2 327 chr3R 4657259 intron spartin + chr3R 4657422 intron spartin + chr3R 4657586 exon spartin + chr3R_5_4655001 chr3R_4655001 RAL-307_100b 2883 chr3R 4657270 4657273 chr3R 4657583 4657602 5 321 12.0 33.0 22.5 0.2 332 chr3R 4657270 intron spartin + chr3R 4657436 intron spartin + chr3R 4657602 exon spartin + chr3R_5_4655001 chr3R_4655001 RAL-307_100b 2884 chr3R 4680682 4680741 chr3R 4680786 4680845 54 102 11.5 14.5 13.0 3.9 163 chr3R 4680682 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680845 intron CG43427 + chr3R_54_4680001 chr3R_4680001 RAL-307_100b 2885 chr3R 4745566 4745619 chr3R 4745673 4745711 32 104 6.5 2.5 4.5 5.8 145 chr3R 4745566 intron tacc - chr3R 4745638 intron tacc - chr3R 4745711 intron tacc - chr3R_32_4745001 chr3R_4745001 RAL-307_100b 2886 chr3R 4753219 4753230 chr3R 4757547 4757558 F-element 11 4327 45.0 22.0 33.5 0.3 4339 chr3R 4753219 intron,intron atms +,CG44098 - chr3R 4755388 intron,intron atms +,CG44098 - chr3R 4757558 intron,exon atms +,CG44098 - chr3R_11_4755001 chr3R_4755001 RAL-307_100b 2887 chr3R 4753233 4753259 chr3R 4757544 4757583 F-element 27 4323 30.5 20.0 25.2 1.0 4350 chr3R 4753233 intron,intron atms +,CG44098 - chr3R 4755408 intron,intron atms +,CG44098 - chr3R 4757583 intron,exon atms +,CG44098 - chr3R_27_4755001 chr3R_4755001 RAL-307_100b 2888 chr3R 4753260 4753278 chr3R 4757539 4757547 F-element 9 4302 20.0 18.0 19.0 0.5 4287 chr3R 4753260 intron,intron atms +,CG44098 - chr3R 4755404 intron,intron atms +,CG44098 - chr3R 4757547 intron,exon atms +,CG44098 - chr3R_9_4755001 chr3R_4755001 RAL-307_100b 2889 chr3R 4762079 4762089 chr3R 4762443 4762453 10 364 12.5 28.0 20.2 0.5 374 chr3R 4762079 intron,intron atms +,CG44098 - chr3R 4762266 intron,intron atms +,CG44098 - chr3R 4762453 intron,intron atms +,CG44098 - chr3R_10_4760001 chr3R_4760001 RAL-307_100b 2890 chr3R 4769133 4769191 chr3R 4769236 4769294 54 99 17.5 19.5 18.5 2.8 161 chr3R 4769133 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769294 intron,intron atms +,CG44098 - chr3R_54_4765001 chr3R_4765001 RAL-307_100b 2891 chr3R 4861540 4861597 chr3R 4861646 4861703 53 98 19.5 14.0 16.8 3.0 163 chr3R 4861540 intron opa + chr3R 4861622 intron opa + chr3R 4861703 intron opa + chr3R_53_4860001 chr3R_4860001 RAL-307_100b 2892 chr3R 4887452 4887512 chr3R 4894854 4894872 rover 40 7394 12.0 17.0 14.5 2.6 7420 chr3R 4887452 intergenic not near genes chr3R 4891162 intergenic not near genes chr3R 4894872 intergenic not near genes chr3R_40_4890001 chr3R_4890001 RAL-307_100b 2893 chr3R 4922318 4922363 chr3R 4922422 4922467 45 102 16.5 16.0 16.2 2.6 149 chr3R 4922318 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922467 intron Cdep + chr3R_45_4920001 chr3R_4920001 RAL-307_100b 2894 chr3R 4948362 4948392 chr3R 4949004 4949039 27 645 62.5 80.5 71.5 0.4 677 chr3R 4948362 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948700 intergenic UbcD6 - chr3R 4949039 3` UTR UbcD6 - chr3R_27_4945001 chr3R_4945001 RAL-307_100b 2895 chr3R 4965984 4966037 chr3R 4966101 4966154 53 112 12.0 14.5 13.2 3.7 170 chr3R 4965984 intron CG1124 + chr3R 4966069 intron CG1124 + chr3R 4966154 intron CG1124 + chr3R_53_4965001 chr3R_4965001 RAL-307_100b 2896 chr3R 4981394 4981444 chr3R 4981488 4981522 29 84 12.5 15.0 13.8 2.0 128 chr3R 4981394 intergenic not near genes chr3R 4981458 intergenic not near genes chr3R 4981522 intergenic CG14662 - chr3R_29_4980001 chr3R_4980001 RAL-307_100b 2897 chr3R 4984901 4984911 chr3R 4985014 4985040 13 123 21.5 24.0 22.8 0.5 139 chr3R 4984901 3` UTR CR43424 - chr3R 4984970 3` UTR CR43424 - chr3R 4985040 3` UTR CR43424 - chr3R_13_4980001 chr3R_4980001 RAL-307_100b 2898 chr3R 4984913 4984914 chr3R 4985011 4985043 4 114 19.0 22.5 20.8 0.2 130 chr3R 4984913 3` UTR CR43424 - chr3R 4984978 3` UTR CR43424 - chr3R 4985043 3` UTR CR43424 - chr3R_4_4980001 chr3R_4980001 RAL-307_100b 2899 chr3R 4984915 4984919 chr3R 4985008 4985048 5 122 16.0 20.5 18.2 0.3 133 chr3R 4984915 3` UTR CR43424 - chr3R 4984982 3` UTR CR43424 - chr3R 4985048 3` UTR CR43424 - chr3R_5_4980001 chr3R_4980001 RAL-307_100b 2900 chr3R 5039029 5039070 chr3R 5039152 5039172 33 118 21.5 18.0 19.8 1.6 143 chr3R 5039029 intergenic not near genes chr3R 5039100 intergenic not near genes chr3R 5039172 intergenic not near genes chr3R_33_5035001 chr3R_5035001 RAL-307_100b 2901 chr3R 5045819 5045877 chr3R 5052946 5053004 HMS-Beagle 42 7126 21.5 8.0 14.8 2.7 7185 chr3R 5045819 3` UTR CR43635 - chr3R 5049412 intergenic not near genes chr3R 5053004 intergenic CR45588 - chr3R_42_5045001 chr3R_5045001 RAL-307_100b 2902 chr3R 5067955 5068010 chr3R 5073497 5073552 mdg3 59 5540 15.0 19.5 17.2 3.2 5597 chr3R 5067955 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073552 intergenic not near genes chr3R_59_5070001 chr3R_5070001 RAL-307_100b 2903 chr3R 5077269 5077310 chr3R 5077430 5077471 18 158 11.5 12.5 12.0 1.4 202 chr3R 5077269 intergenic not near genes chr3R 5077370 intergenic corto - chr3R 5077471 intergenic corto - chr3R_18_5075001 chr3R_5075001 RAL-307_100b 2904 chr3R 5081119 5081136 chr3R 5081231 5081263 19 130 3.0 20.0 11.5 1.5 144 chr3R 5081119 3` UTR corto - chr3R 5081191 3` UTR corto - chr3R 5081263 3` UTR corto - chr3R_19_5080001 chr3R_5080001 RAL-307_100b 2905 chr3R 5105536 5105553 chr3R 5105632 5105661 11 95 34.0 14.0 24.0 0.4 125 chr3R 5105536 intergenic not near genes chr3R 5105598 intergenic not near genes chr3R 5105661 intergenic not near genes chr3R_11_5105001 chr3R_5105001 RAL-307_100b 2906 chr3R 5105554 5105580 chr3R 5105631 5105677 17 77 15.0 14.0 14.5 1.1 123 chr3R 5105554 intergenic not near genes chr3R 5105616 intergenic not near genes chr3R 5105677 intergenic not near genes chr3R_17_5105001 chr3R_5105001 RAL-307_100b 2907 chr3R 5158118 5158174 chr3R 5158236 5158292 47 116 14.0 14.5 14.2 3.1 174 chr3R 5158118 intron dpr16 + chr3R 5158205 intron dpr16 + chr3R 5158292 intron dpr16 + chr3R_47_5155001 chr3R_5155001 RAL-307_100b 2908 chr3R 5191364 5191423 chr3R 5191620 5191674 67 260 126.5 111.0 118.8 0.6 310 chr3R 5191364 intron cno - chr3R 5191519 intron cno - chr3R 5191674 intron cno - chr3R_67_5190001 chr3R_5190001 RAL-307_100b 2909 chr3R 5205119 5205136 chr3R 5205236 5205253 15 116 21.0 16.5 18.8 0.8 134 chr3R 5205119 intron cno - chr3R 5205186 intron cno - chr3R 5205253 intron cno - chr3R_15_5205001 chr3R_5205001 RAL-307_100b 2910 chr3R 5297078 5297079 chr3R 29256993 29257032 4 23959938 70.0 29.0 49.5 0.1 23959954 chr3R 5297078 intron mtd - chr3R 17277055 intergenic not near genes chr3R 29257032 intron CG45544 + chr3R_4_17275001 chr3R_17275001 RAL-307_100b 2911 chr3R 5338258 5338312 chr3R 5343606 5343664 Rt1c 50 5347 18.0 17.5 17.8 2.7 5406 chr3R 5338258 intron mtd - chr3R 5340961 intron mtd - chr3R 5343664 intron mtd - chr3R_50_5340001 chr3R_5340001 RAL-307_100b 2912 chr3R 5397291 5397339 chr3R 5397395 5397443 25 102 8.0 8.0 8.0 2.8 152 chr3R 5397291 3` UTR CG1172 + chr3R 5397367 3` UTR CG1172 + chr3R 5397443 3` UTR CG1172 + chr3R_25_5395001 chr3R_5395001 RAL-307_100b 2913 chr3R 5422824 5422833 chr3R 5423165 5423176 12 343 0.5 12.5 6.5 1.6 352 chr3R 5422824 intron CG14669 + chr3R 5423000 intron CG14669 + chr3R 5423176 intron CG14669 + chr3R_12_5420001 chr3R_5420001 RAL-307_100b 2914 chr3R 5445935 5445980 chr3R 5452420 5452465 Burdock 41 6484 18.0 15.5 16.8 2.3 6530 chr3R 5445935 intron CG14669 + chr3R 5449200 intron CG14669 + chr3R 5452465 intron CG14669 + chr3R_41_5445001 chr3R_5445001 RAL-307_100b 2915 chr3R 5445981 5445992 chr3R 5452419 5452472 Burdock 15 6476 12.0 15.5 13.8 1.0 6491 chr3R 5445981 intron CG14669 + chr3R 5449226 intron CG14669 + chr3R 5452472 intron CG14669 + chr3R_15_5445001 chr3R_5445001 RAL-307_100b 2916 chr3R 5502269 5502306 chr3R 5502608 5502639 26 336 15.0 40.0 27.5 0.9 370 chr3R 5502269 exon CG31547 - chr3R 5502454 5` UTR CG31547 - chr3R 5502639 5` UTR CG31547 - chr3R_26_5500001 chr3R_5500001 RAL-307_100b 2917 chr3R 5506816 5506869 chr3R 5506973 5507026 28 154 15.0 14.0 14.5 1.8 210 chr3R 5506816 intergenic not near genes chr3R 5506921 intergenic not near genes chr3R 5507026 intergenic not near genes chr3R_28_5505001 chr3R_5505001 RAL-307_100b 2918 chr3R 5578767 5578773 chr3R 5578868 5578875 4 102 46.5 13.0 29.8 0.1 108 chr3R 5578767 3` UTR CRMP + chr3R 5578821 3` UTR CRMP + chr3R 5578875 3` UTR CRMP + chr3R_4_5575001 chr3R_5575001 RAL-307_100b 2919 chr3R 5578774 5578806 chr3R 5578866 5578870 18 97 30.0 12.0 21.0 0.8 96 chr3R 5578774 3` UTR CRMP + chr3R 5578822 3` UTR CRMP + chr3R 5578870 3` UTR CRMP + chr3R_18_5575001 chr3R_5575001 RAL-307_100b 2920 chr3R 5578808 5578819 chr3R 5578865 5578921 11 94 25.0 12.0 18.5 0.6 113 chr3R 5578808 3` UTR CRMP + chr3R 5578864 3` UTR CRMP + chr3R 5578921 3` UTR CRMP + chr3R_11_5575001 chr3R_5575001 RAL-307_100b 2921 chr3R 5712056 5712115 chr3R 5712169 5712221 71 110 9.0 12.5 10.8 6.0 165 chr3R 5712056 3` UTR plx + chr3R 5712138 3` UTR plx + chr3R 5712221 3` UTR plx + chr3R_71_5710001 chr3R_5710001 RAL-307_100b 2922 chr3R 5745998 5746046 chr3R 5746254 5746295 pogo 35 263 13.5 21.0 17.2 1.9 297 chr3R 5745998 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746295 3` UTR Madm + chr3R_35_5745001 chr3R_5745001 RAL-307_100b 2923 chr3R 5746990 5747046 chr3R 5753206 5753248 diver 47 6214 10.0 11.0 10.5 4.1 6258 chr3R 5746990 intergenic Madm + chr3R 5750119 intergenic not near genes chr3R 5753248 intergenic CG2091 - chr3R_47_5750001 chr3R_5750001 RAL-307_100b 2924 chr3R 5772350 5772403 chr3R 5772533 5772586 51 181 12.5 15.0 13.8 3.4 236 chr3R 5772350 intron CG2082 - chr3R 5772468 intron CG2082 - chr3R 5772586 intron CG2082 - chr3R_51_5770001 chr3R_5770001 RAL-307_100b 2925 chr3R 5809088 5809144 chr3R 5809354 5809410 pogo 57 260 18.5 9.5 14.0 3.8 322 chr3R 5809088 3` UTR CG11000 + chr3R 5809249 3` UTR CG11000 + chr3R 5809410 3` UTR CG11000 + chr3R_57_5805001 chr3R_5805001 RAL-307_100b 2926 chr3R 5822358 5822409 chr3R 5823550 5823591 1360 45 1191 16.0 13.5 14.8 2.8 1233 chr3R 5822358 3` UTR CG2023 - chr3R 5822974 3` UTR CG2023 - chr3R 5823591 3` UTR CG2023 - chr3R_45_5820001 chr3R_5820001 RAL-307_100b 2927 chr3R 5836177 5836182 chr3R 5836306 5836311 6 129 39.5 41.5 40.5 0.1 134 chr3R 5836177 intron,3` UTR CG1208 +,CR45192 - chr3R 5836244 intron CG1208 + chr3R 5836311 intron CG1208 + chr3R_6_5835001 chr3R_5835001 RAL-307_100b 2928 chr3R 5846855 5846906 chr3R 5846953 5847007 39 100 15.5 9.5 12.5 2.9 152 chr3R 5846855 intergenic CG1213 +,CG14676 + chr3R 5846931 intergenic CG14676 +,CG1213 + chr3R 5847007 intergenic CG14676 +,CG1213 + chr3R_39_5845001 chr3R_5845001 RAL-307_100b 2929 chr3R 5895936 5895988 chr3R 5896169 5896222 24 234 7.5 8.5 8.0 2.7 286 chr3R 5895936 intron CG34113 - chr3R 5896079 intron CG34113 - chr3R 5896222 intron CG34113 - chr3R_24_5895001 chr3R_5895001 RAL-307_100b 2930 chr3R 5927538 5927552 chr3R 5927802 5927814 pogo 7 264 43.0 18.5 30.8 0.2 276 chr3R 5927538 intron CG34113 - chr3R 5927676 intron CG34113 - chr3R 5927814 intron CG34113 - chr3R_7_5925001 chr3R_5925001 RAL-307_100b 2931 chr3R 5927557 5927580 chr3R 5927801 5927845 pogo 29 255 28.5 18.5 23.5 1.2 288 chr3R 5927557 intron CG34113 - chr3R 5927701 intron CG34113 - chr3R 5927845 intron CG34113 - chr3R_29_5925001 chr3R_5925001 RAL-307_100b 2932 chr3R 5931439 5931458 chr3R 5931552 5931561 15 112 9.5 27.5 18.5 0.8 122 chr3R 5931439 intron CG34113 - chr3R 5931500 intron CG34113 - chr3R 5931561 intron CG34113 - chr3R_15_5930001 chr3R_5930001 RAL-307_100b 2933 chr3R 5935336 5935392 chr3R 5935437 5935493 42 99 13.0 5.5 9.2 4.1 157 chr3R 5935336 intron CG34113 - chr3R 5935414 intron CG34113 - chr3R 5935493 intron CG34113 - chr3R_42_5935001 chr3R_5935001 RAL-307_100b 2934 chr3R 5943378 5943416 chr3R 5943482 5943520 42 102 8.0 11.0 9.5 4.0 142 chr3R 5943378 intron CG34113 - chr3R 5943449 intron CG34113 - chr3R 5943520 intron CG34113 - chr3R_42_5940001 chr3R_5940001 RAL-307_100b 2935 chr3R 6006304 6006358 chr3R 6006414 6006468 46 108 6.5 13.0 9.8 4.3 164 chr3R 6006304 intron Rm62 - chr3R 6006386 intron Rm62 - chr3R 6006468 intron Rm62 - chr3R_46_6005001 chr3R_6005001 RAL-307_100b 2936 chr3R 6015939 6015956 chr3R 6024445 6024462 Tirant 15 8505 36.5 24.5 30.5 0.5 8523 chr3R 6015939 intergenic not near genes chr3R 6020200 intergenic not near genes chr3R 6024462 intergenic not near genes chr3R_15_6020001 chr3R_6020001 RAL-307_100b 2937 chr3R 6015957 6015995 chr3R 6024441 6024496 Tirant 28 8500 12.5 21.0 16.8 1.6 8539 chr3R 6015957 intergenic not near genes chr3R 6020226 intergenic not near genes chr3R 6024496 intergenic not near genes chr3R_28_6020001 chr3R_6020001 RAL-307_100b 2938 chr3R 6043613 6043670 chr3R 6043860 6043901 44 244 15.0 24.0 19.5 2.1 288 chr3R 6043613 intergenic not near genes chr3R 6043757 intergenic not near genes chr3R 6043901 intergenic not near genes chr3R_44_6040001 chr3R_6040001 RAL-307_100b 2939 chr3R 6048419 6048478 chr3R 6048527 6048586 59 105 10.0 16.0 13.0 4.2 167 chr3R 6048419 intergenic not near genes chr3R 6048502 intergenic not near genes chr3R 6048586 intergenic not near genes chr3R_59_6045001 chr3R_6045001 RAL-307_100b 2940 chr3R 6121168 6121185 chr3R 6121381 6121422 BS 15 238 0.0 11.5 5.8 2.2 254 chr3R 6121168 intergenic not near genes chr3R 6121295 intergenic not near genes chr3R 6121422 intergenic not near genes chr3R_15_6120001 chr3R_6120001 RAL-307_100b 2941 chr3R 6158488 6158528 chr3R 6167096 6167136 Tirant 15 8607 24.5 15.5 20.0 0.7 8648 chr3R 6158488 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167136 intergenic CG1077 + chr3R_15_6160001 chr3R_6160001 RAL-307_100b 2942 chr3R 6158530 6158536 chr3R 6167094 6167134 Tirant 8 8594 20.0 14.0 17.0 0.4 8604 chr3R 6158530 intergenic not near genes chr3R 6162832 intergenic not near genes chr3R 6167134 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 RAL-307_100b 2943 chr3R 6175154 6175156 chr3R 6182445 6182453 HMS-Beagle2 7 7296 33.5 13.5 23.5 0.3 7299 chr3R 6175154 intergenic Osi1 + chr3R 6178804 intron CR45194 + chr3R 6182453 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-307_100b 2944 chr3R 6175157 6175205 chr3R 6182443 6182470 HMS-Beagle2 45 7289 15.5 11.0 13.2 3.2 7313 chr3R 6175157 intergenic Osi1 + chr3R 6178814 intron CR45194 + chr3R 6182470 intergenic CR45194 + chr3R_45_6175001 chr3R_6175001 RAL-307_100b 2945 chr3R 6191150 6191200 chr3R 6191249 6191301 50 101 17.0 15.0 16.0 2.9 151 chr3R 6191150 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191301 intron NPFR + chr3R_50_6190001 chr3R_6190001 RAL-307_100b 2946 chr3R 6330760 6330768 chr3R 6330900 6330908 4 140 26.5 15.0 20.8 0.2 148 chr3R 6330760 exon Osi18 + chr3R 6330834 intron Osi18 + chr3R 6330908 intron Osi18 + chr3R_4_6330001 chr3R_6330001 RAL-307_100b 2947 chr3R 6330771 6330816 chr3R 6330895 6330956 36 136 7.0 12.5 9.8 3.3 185 chr3R 6330771 exon Osi18 + chr3R 6330864 intron Osi18 + chr3R 6330956 intron Osi18 + chr3R_36_6330001 chr3R_6330001 RAL-307_100b 2948 chr3R 6461552 6461613 chr3R 6461658 6461718 38 104 8.0 10.0 9.0 3.8 166 chr3R 6461552 intergenic not near genes chr3R 6461635 intergenic not near genes chr3R 6461718 intergenic not near genes chr3R_38_6460001 chr3R_6460001 RAL-307_100b 2949 chr3R 6484034 6484091 chr3R 6484152 6484209 66 117 14.0 13.5 13.8 4.5 175 chr3R 6484034 intron CG15186 + chr3R 6484122 intron CG15186 + chr3R 6484209 intron CG15186 + chr3R_66_6480001 chr3R_6480001 RAL-307_100b 2950 chr3R 6496633 6496687 chr3R 6496746 6496800 53 111 6.5 13.5 10.0 4.8 167 chr3R 6496633 intergenic not near genes chr3R 6496716 intergenic not near genes chr3R 6496800 intergenic not near genes chr3R_53_6495001 chr3R_6495001 RAL-307_100b 2951 chr3R 6510001 6510051 chr3R 6515107 6515117 jockey 42 5103 17.5 15.0 16.2 2.4 5116 chr3R 6510001 intergenic not near genes chr3R 6512559 intergenic not near genes chr3R 6515117 intergenic not near genes chr3R_42_6510001 chr3R_6510001 RAL-307_100b 2952 chr3R 6519093 6519107 chr3R 6519221 6519240 14 130 33.0 5.5 19.2 0.7 147 chr3R 6519093 intergenic not near genes chr3R 6519166 intergenic not near genes chr3R 6519240 intergenic not near genes chr3R_14_6515001 chr3R_6515001 RAL-307_100b 2953 chr3R 6519108 6519146 chr3R 6519219 6519279 13 131 15.5 4.0 9.8 1.2 171 chr3R 6519108 intergenic not near genes chr3R 6519194 intergenic not near genes chr3R 6519279 intergenic not near genes chr3R_13_6515001 chr3R_6515001 RAL-307_100b 2954 chr3R 6610022 6610034 chr3R 6610198 6610211 5 177 36.0 11.5 23.8 0.2 189 chr3R 6610022 intergenic not near genes chr3R 6610116 intergenic not near genes chr3R 6610211 intergenic not near genes chr3R_5_6610001 chr3R_6610001 RAL-307_100b 2955 chr3R 6610036 6610072 chr3R 6610195 6610229 44 171 19.0 9.5 14.2 2.9 193 chr3R 6610036 intergenic not near genes chr3R 6610132 intergenic not near genes chr3R 6610229 intergenic not near genes chr3R_44_6610001 chr3R_6610001 RAL-307_100b 2956 chr3R 6621854 6621889 chr3R 6621970 6622006 35 115 17.5 13.5 15.5 2.1 152 chr3R 6621854 intergenic not near genes chr3R 6621930 intergenic not near genes chr3R 6622006 intergenic not near genes chr3R_35_6620001 chr3R_6620001 RAL-307_100b 2957 chr3R 6624235 6624241 chr3R 6624342 6624348 4 107 33.5 8.0 20.8 0.2 113 chr3R 6624235 intergenic not near genes chr3R 6624292 intergenic not near genes chr3R 6624348 intergenic not near genes chr3R_4_6620001 chr3R_6620001 RAL-307_100b 2958 chr3R 6624242 6624285 chr3R 6624341 6624392 42 106 10.5 7.5 9.0 4.2 150 chr3R 6624242 intergenic not near genes chr3R 6624317 intergenic not near genes chr3R 6624392 intergenic not near genes chr3R_42_6620001 chr3R_6620001 RAL-307_100b 2959 chr3R 6639885 6639913 chr3R 6639988 6640016 25 102 22.0 0.0 11.0 2.1 131 chr3R 6639885 intergenic not near genes chr3R 6639950 intergenic not near genes chr3R 6640016 intergenic not near genes chr3R_25_6635001 chr3R_6635001 RAL-307_100b 2960 chr3R 6655738 6655750 chr3R 6656035 6656047 12 295 54.5 14.5 34.5 0.3 309 chr3R 6655738 exon Taf1 + chr3R 6655892 3` UTR Taf1 + chr3R 6656047 3` UTR Taf1 + chr3R_12_6655001 chr3R_6655001 RAL-307_100b 2961 chr3R 6655752 6655795 chr3R 6656034 6656084 46 294 20.5 14.0 17.2 2.5 332 chr3R 6655752 exon Taf1 + chr3R 6655918 3` UTR Taf1 + chr3R 6656084 intergenic Taf1 +,CG1307 - chr3R_46_6655001 chr3R_6655001 RAL-307_100b 2962 chr3R 6663582 6663633 chr3R 6663683 6663738 49 100 16.5 10.0 13.2 3.5 156 chr3R 6663582 intron lab - chr3R 6663660 intron lab - chr3R 6663738 intron lab - chr3R_49_6660001 chr3R_6660001 RAL-307_100b 2963 chr3R 6670547 6670602 chr3R 6670681 6670736 52 132 9.5 12.5 11.0 4.3 189 chr3R 6670547 intron lab - chr3R 6670642 intron lab - chr3R 6670736 intron lab - chr3R_52_6670001 chr3R_6670001 RAL-307_100b 2964 chr3R 6705664 6705714 chr3R 6705911 6705963 41 247 1.0 13.0 7.0 5.1 299 chr3R 6705664 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705963 intergenic not near genes chr3R_41_6705001 chr3R_6705001 RAL-307_100b 2965 chr3R 6737475 6737487 chr3R 6739287 6739299 Doc 7 1811 31.0 12.0 21.5 0.3 1824 chr3R 6737475 intron pb - chr3R 6738387 intron pb - chr3R 6739299 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-307_100b 2966 chr3R 6737493 6737525 chr3R 6739284 6739334 Doc 25 1804 12.0 11.0 11.5 2.0 1841 chr3R 6737493 intron pb - chr3R 6738414 intron pb - chr3R 6739334 intron pb - chr3R_25_6735001 chr3R_6735001 RAL-307_100b 2967 chr3R 6740979 6741036 chr3R 6741087 6741144 52 104 10.5 10.5 10.5 4.5 165 chr3R 6740979 intron pb - chr3R 6741062 intron pb - chr3R 6741144 intron pb - chr3R_52_6740001 chr3R_6740001 RAL-307_100b 2968 chr3R 6819611 6819661 chr3R 6819720 6819720 43 107 9.0 11.5 10.2 3.8 109 chr3R 6819611 intergenic not near genes chr3R 6819666 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819720 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_43_6815001 chr3R_6815001 RAL-307_100b 2969 chr3R 6828000 6828039 chr3R 6828101 6828140 28 101 13.0 11.5 12.2 2.1 140 chr3R 6828000 intron Scr - chr3R 6828070 intron Scr - chr3R 6828140 intron Scr - chr3R_28_6825001 chr3R_6825001 RAL-307_100b 2970 chr3R 6856359 6856399 chr3R 6856501 6856541 31 140 10.5 10.0 10.2 2.8 182 chr3R 6856359 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856541 intergenic not near genes chr3R_31_6855001 chr3R_6855001 RAL-307_100b 2971 chr3R 6862197 6862250 chr3R 6862306 6862361 43 109 17.0 16.0 16.5 2.5 164 chr3R 6862197 intergenic not near genes chr3R 6862279 intergenic not near genes chr3R 6862361 intergenic not near genes chr3R_43_6860001 chr3R_6860001 RAL-307_100b 2972 chr3R 6918039 6918050 chr3R 6918142 6918152 9 103 24.5 9.0 16.8 0.5 113 chr3R 6918039 intron Antp - chr3R 6918096 intron Antp - chr3R 6918152 intron Antp - chr3R_9_6915001 chr3R_6915001 RAL-307_100b 2973 chr3R 6918052 6918095 chr3R 6918138 6918198 28 98 8.5 8.0 8.2 3.0 146 chr3R 6918052 intron Antp - chr3R 6918125 intron Antp - chr3R 6918198 intron Antp - chr3R_28_6915001 chr3R_6915001 RAL-307_100b 2974 chr3R 6990441 6990497 chr3R 6990556 6990593 32 111 7.5 8.0 7.8 3.6 152 chr3R 6990441 intron Antp - chr3R 6990517 intron Antp - chr3R 6990593 intron Antp - chr3R_32_6990001 chr3R_6990001 RAL-307_100b 2975 chr3R 6991150 6991208 chr3R 6991251 6991308 43 98 13.0 6.5 9.8 4.0 158 chr3R 6991150 intron Antp - chr3R 6991229 intron Antp - chr3R 6991308 intron Antp - chr3R_43_6990001 chr3R_6990001 RAL-307_100b 2976 chr3R 7012180 7012198 chr3R 7012283 7012301 16 102 38.0 15.5 26.8 0.6 121 chr3R 7012180 intergenic not near genes chr3R 7012240 intergenic not near genes chr3R 7012301 intergenic not near genes chr3R_16_7010001 chr3R_7010001 RAL-307_100b 2977 chr3R 7012199 7012233 chr3R 7012282 7012336 39 97 14.5 16.0 15.2 2.4 137 chr3R 7012199 intergenic not near genes chr3R 7012268 intergenic not near genes chr3R 7012336 intergenic not near genes chr3R_39_7010001 chr3R_7010001 RAL-307_100b 2978 chr3R 7051096 7051153 chr3R 7051200 7051257 67 101 10.0 14.0 12.0 5.2 161 chr3R 7051096 intergenic not near genes chr3R 7051176 intergenic not near genes chr3R 7051257 intergenic not near genes chr3R_67_7050001 chr3R_7050001 RAL-307_100b 2979 chr3R 7094694 7094694 chr3R 7773344 7773344 4 678650 70.0 65.0 67.5 0.1 678650 chr3R 7094694 3` UTR e(y)2b + chr3R 7434019 intergenic not near genes chr3R 7773344 intergenic not near genes chr3R_4_7430001 chr3R_7430001 RAL-307_100b 2980 chr3R 7103262 7103315 chr3R 7103362 7103375 55 94 20.0 24.5 22.2 2.4 113 chr3R 7103262 intron Alh - chr3R 7103318 intron Alh - chr3R 7103375 intron Alh - chr3R_55_7100001 chr3R_7100001 RAL-307_100b 2981 chr3R 7121714 7121737 chr3R 7121822 7121845 6 108 19.5 12.5 16.0 0.4 131 chr3R 7121714 exon Alh - chr3R 7121780 intron Alh - chr3R 7121845 intron Alh - chr3R_6_7120001 chr3R_7120001 RAL-307_100b 2982 chr3R 7126478 7126533 chr3R 7126598 7126653 59 119 11.5 11.0 11.2 4.8 175 chr3R 7126478 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126653 3` UTR CG10068 - chr3R_59_7125001 chr3R_7125001 RAL-307_100b 2983 chr3R 7173655 7173707 chr3R 7173760 7173812 40 104 11.0 13.0 12.0 3.1 157 chr3R 7173655 intron sas + chr3R 7173734 intron sas + chr3R 7173812 intron sas + chr3R_40_7170001 chr3R_7170001 RAL-307_100b 2984 chr3R 7217431 7217488 chr3R 7217677 7217734 43 245 12.5 13.5 13.0 3.1 303 chr3R 7217431 intergenic CG14605 -,CG14606 - chr3R 7217582 intergenic CG14605 -,CG14606 - chr3R 7217734 exon CG14605 - chr3R_43_7215001 chr3R_7215001 RAL-307_100b 2985 chr3R 7332117 7332178 chr3R 7332219 7332271 25 97 13.5 12.5 13.0 1.8 154 chr3R 7332117 intergenic CR44337 + chr3R 7332194 intergenic CR44337 + chr3R 7332271 intergenic CR44337 + chr3R_25_7330001 chr3R_7330001 RAL-307_100b 2986 chr3R 7402152 7402165 chr3R 7402283 7402283 4 127 38.0 17.0 27.5 0.1 131 chr3R 7402152 intergenic not near genes chr3R 7402218 intergenic not near genes chr3R 7402283 intergenic not near genes chr3R_4_7400001 chr3R_7400001 RAL-307_100b 2987 chr3R 7402166 7402169 chr3R 7402277 7402284 6 118 35.5 11.0 23.2 0.2 118 chr3R 7402166 intergenic not near genes chr3R 7402225 intergenic not near genes chr3R 7402284 intergenic not near genes chr3R_6_7400001 chr3R_7400001 RAL-307_100b 2988 chr3R 7402170 7402205 chr3R 7402276 7402281 21 115 13.0 11.0 12.0 1.6 111 chr3R 7402170 intergenic not near genes chr3R 7402226 intergenic not near genes chr3R 7402281 intergenic not near genes chr3R_21_7400001 chr3R_7400001 RAL-307_100b 2989 chr3R 7447966 7448011 chr3R 7448069 7448114 41 101 18.5 16.0 17.2 2.3 148 chr3R 7447966 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448114 intergenic not near genes chr3R_41_7445001 chr3R_7445001 RAL-307_100b 2990 chr3R 7574597 7574651 chr3R 7574702 7574743 23 98 7.0 9.0 8.0 2.6 146 chr3R 7574597 intron CG34127 - chr3R 7574670 intron CG34127 - chr3R 7574743 intron CG34127 - chr3R_23_7570001 chr3R_7570001 RAL-307_100b 2991 chr3R 7621505 7621563 chr3R 7621620 7621678 20 114 9.5 10.5 10.0 1.8 173 chr3R 7621505 intron CG34127 - chr3R 7621592 intron CG34127 - chr3R 7621678 intron CG34127 - chr3R_20_7620001 chr3R_7620001 RAL-307_100b 2992 chr3R 7641035 7641096 chr3R 7642624 7642644 hobo 57 1585 18.5 14.0 16.2 3.3 1609 chr3R 7641035 intergenic not near genes chr3R 7641840 intergenic not near genes chr3R 7642644 intergenic not near genes chr3R_57_7640001 chr3R_7640001 RAL-307_100b 2993 chr3R 7688729 7688782 chr3R 7689108 7689162 35 377 13.5 10.0 11.8 2.7 433 chr3R 7688729 intron Nlg1 + chr3R 7688946 intron Nlg1 + chr3R 7689162 intron Nlg1 + chr3R_35_7685001 chr3R_7685001 RAL-307_100b 2994 chr3R 7729442 7729495 chr3R 7737405 7737436 Stalker2 43 7960 23.5 17.5 20.5 2.0 7994 chr3R 7729442 intergenic not near genes chr3R 7733439 intergenic not near genes chr3R 7737436 intergenic not near genes chr3R_43_7730001 chr3R_7730001 RAL-307_100b 2995 chr3R 7740852 7740913 chr3R 7740961 7740982 43 103 9.5 13.0 11.2 3.5 130 chr3R 7740852 intergenic CR44935 + chr3R 7740917 intergenic CR44935 + chr3R 7740982 intergenic CR44935 + chr3R_43_7740001 chr3R_7740001 RAL-307_100b 2996 chr3R 7752296 7752296 chr3R 22087875 22087893 4 14335591 66.5 33.5 50.0 0.1 14335597 chr3R 7752296 intergenic not near genes chr3R 14920094 intron Sdr + chr3R 22087893 intron CG5778 - chr3R_4_14920001 chr3R_14920001 RAL-307_100b 2997 chr3R 7760230 7760284 chr3R 7760764 7760818 55 532 20.5 16.0 18.2 2.9 588 chr3R 7760230 intron Sp7 + chr3R 7760524 intron Sp7 + chr3R 7760818 5` UTR Sp7 + chr3R_55_7760001 chr3R_7760001 RAL-307_100b 2998 chr3R 7775888 7775905 chr3R 7775994 7775995 16 104 34.5 18.0 26.2 0.6 107 chr3R 7775888 intergenic not near genes chr3R 7775942 intergenic not near genes chr3R 7775995 intergenic not near genes chr3R_16_7775001 chr3R_7775001 RAL-307_100b 2999 chr3R 7775906 7775951 chr3R 7775992 7776040 26 101 14.0 18.5 16.2 1.5 134 chr3R 7775906 intergenic not near genes chr3R 7775973 intergenic not near genes chr3R 7776040 intergenic not near genes chr3R_26_7775001 chr3R_7775001 RAL-307_100b 3000 chr3R 7948420 7948468 chr3R 7948522 7948570 40 98 15.0 10.5 12.8 2.9 150 chr3R 7948420 intron dsx - chr3R 7948495 intron dsx - chr3R 7948570 intron dsx - chr3R_40_7945001 chr3R_7945001 RAL-307_100b 3001 chr3R 7955909 7955968 chr3R 7956011 7956048 39 96 10.5 12.5 11.5 3.1 139 chr3R 7955909 intron dsx - chr3R 7955978 intron dsx - chr3R 7956048 intron dsx - chr3R_39_7955001 chr3R_7955001 RAL-307_100b 3002 chr3R 7973295 7973344 chr3R 7974382 7974420 1360 30 1086 13.5 13.0 13.2 2.1 1125 chr3R 7973295 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974420 3` UTR CD98hc - chr3R_30_7970001 chr3R_7970001 RAL-307_100b 3003 chr3R 8076008 8076059 chr3R 8076214 8076264 52 203 14.5 9.5 12.0 4.0 256 chr3R 8076008 intron mAChR-B + chr3R 8076136 intron mAChR-B + chr3R 8076264 intron mAChR-B + chr3R_52_8075001 chr3R_8075001 RAL-307_100b 3004 chr3R 8090245 8090304 chr3R 8090447 8090506 56 200 9.0 16.0 12.5 4.1 261 chr3R 8090245 5` UTR CR44330 + chr3R 8090376 intergenic CR44330 + chr3R 8090506 intergenic CR44330 + chr3R_56_8090001 chr3R_8090001 RAL-307_100b 3005 chr3R 8090540 8090566 chr3R 8094042 8094068 297 28 3500 19.0 38.5 28.8 0.9 3528 chr3R 8090540 intergenic CR44330 + chr3R 8092304 intergenic not near genes chr3R 8094068 intergenic CG7900 + chr3R_28_8090001 chr3R_8090001 RAL-307_100b 3006 chr3R 8094387 8094439 chr3R 8099717 8099739 Transpac 38 5327 18.0 20.0 19.0 1.9 5352 chr3R 8094387 intron CG7900 + chr3R 8097063 intron CG7900 + chr3R 8099739 intron CG7900 + chr3R_38_8095001 chr3R_8095001 RAL-307_100b 3007 chr3R 8101740 8101745 chr3R 8104849 8104854 G2 4 3109 31.0 15.5 23.2 0.2 3114 chr3R 8101740 exon CG7900 + chr3R 8103297 intron CG7900 + chr3R 8104854 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-307_100b 3008 chr3R 8101746 8101789 chr3R 8104847 8104850 G2 33 3103 13.5 15.5 14.5 2.1 3104 chr3R 8101746 exon CG7900 + chr3R 8103298 intron CG7900 + chr3R 8104850 3` UTR CG7900 + chr3R_33_8100001 chr3R_8100001 RAL-307_100b 3009 chr3R 8107363 8107421 chr3R 8107522 8107575 58 154 11.5 15.0 13.2 4.1 212 chr3R 8107363 intron puc + chr3R 8107469 intron puc + chr3R 8107575 intron puc + chr3R_58_8105001 chr3R_8105001 RAL-307_100b 3010 chr3R 8163843 8163899 chr3R 8163947 8164003 60 101 15.5 16.0 15.8 3.6 160 chr3R 8163843 intron grn - chr3R 8163923 intron grn - chr3R 8164003 intron grn - chr3R_60_8160001 chr3R_8160001 RAL-307_100b 3011 chr3R 8182632 8182638 chr3R 8182751 8182757 7 119 36.0 13.5 24.8 0.3 125 chr3R 8182632 intergenic not near genes chr3R 8182694 intergenic not near genes chr3R 8182757 intergenic not near genes chr3R_7_8180001 chr3R_8180001 RAL-307_100b 3012 chr3R 8182640 8182684 chr3R 8182744 8182782 48 117 14.0 11.5 12.8 3.5 142 chr3R 8182640 intergenic not near genes chr3R 8182711 intergenic not near genes chr3R 8182782 intergenic not near genes chr3R_48_8180001 chr3R_8180001 RAL-307_100b 3013 chr3R 8207537 8207583 chr3R 8208398 8208423 F-element 50 864 15.0 12.0 13.5 3.4 886 chr3R 8207537 intergenic not near genes chr3R 8207980 intergenic not near genes chr3R 8208423 intergenic not near genes chr3R_50_8205001 chr3R_8205001 RAL-307_100b 3014 chr3R 8230853 8230911 chr3R 8231348 8231392 35 488 16.0 9.0 12.5 2.6 539 chr3R 8230853 3` UTR CR45551 - chr3R 8231122 3` UTR CR45551 - chr3R 8231392 3` UTR CR45551 - chr3R_35_8230001 chr3R_8230001 RAL-307_100b 3015 chr3R 8284082 8284089 chr3R 8284191 8284198 8 108 48.0 29.0 38.5 0.2 116 chr3R 8284082 intergenic not near genes chr3R 8284140 intergenic not near genes chr3R 8284198 intergenic not near genes chr3R_8_8280001 chr3R_8280001 RAL-307_100b 3016 chr3R 8284091 8284123 chr3R 8284190 8284227 33 107 25.5 27.5 26.5 1.2 136 chr3R 8284091 intergenic not near genes chr3R 8284159 intergenic not near genes chr3R 8284227 intergenic not near genes chr3R_33_8280001 chr3R_8280001 RAL-307_100b 3017 chr3R 8284124 8284134 chr3R 8284181 8284194 5 81 20.0 24.0 22.0 0.2 70 chr3R 8284124 intergenic not near genes chr3R 8284159 intergenic not near genes chr3R 8284194 intergenic not near genes chr3R_5_8280001 chr3R_8280001 RAL-307_100b 3018 chr3R 8339246 8339247 chr3R 21907534 21907536 19 13568289 72.0 73.0 72.5 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_19_15120001 chr3R_15120001 RAL-307_100b 3019 chr3R 8402984 8402994 chr3R 8412175 8412185 roo 5 9191 46.0 23.0 34.5 0.1 9201 chr3R 8402984 intron CG45263 - chr3R 8407584 intron CG45263 - chr3R 8412185 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-307_100b 3020 chr3R 8402995 8403041 chr3R 8412171 8412201 roo 51 9185 19.0 22.0 20.5 2.4 9206 chr3R 8402995 intron CG45263 - chr3R 8407598 intron CG45263 - chr3R 8412201 intron CG45263 - chr3R_51_8405001 chr3R_8405001 RAL-307_100b 3021 chr3R 8431128 8431171 chr3R 8431240 8431283 50 110 18.0 20.0 19.0 2.5 155 chr3R 8431128 intron CG45263 - chr3R 8431206 intron CG45263 - chr3R 8431283 intron CG45263 - chr3R_50_8430001 chr3R_8430001 RAL-307_100b 3022 chr3R 8431172 8431180 chr3R 8431234 8431236 16 104 14.5 17.5 16.0 0.9 64 chr3R 8431172 intron CG45263 - chr3R 8431204 intron CG45263 - chr3R 8431236 intron CG45263 - chr3R_16_8430001 chr3R_8430001 RAL-307_100b 3023 chr3R 8468143 8468203 chr3R 8468259 8468280 49 108 9.0 19.5 14.2 3.2 137 chr3R 8468143 intron CG45263 - chr3R 8468212 intron CG45263 - chr3R 8468280 intron CG45263 - chr3R_49_8465001 chr3R_8465001 RAL-307_100b 3024 chr3R 8478054 8478110 chr3R 8478159 8478215 55 103 8.5 16.0 12.2 4.2 161 chr3R 8478054 intergenic CG45263 - chr3R 8478134 intergenic not near genes chr3R 8478215 intergenic not near genes chr3R_55_8475001 chr3R_8475001 RAL-307_100b 3025 chr3R 8541314 8541321 chr3R 8541420 8541426 8 105 49.0 11.5 30.2 0.3 112 chr3R 8541314 intergenic not near genes chr3R 8541370 intergenic not near genes chr3R 8541426 intergenic not near genes chr3R_8_8540001 chr3R_8540001 RAL-307_100b 3026 chr3R 8541322 8541368 chr3R 8541419 8541474 64 100 18.5 11.0 14.8 4.1 152 chr3R 8541322 intergenic not near genes chr3R 8541398 intergenic not near genes chr3R 8541474 intergenic not near genes chr3R_64_8540001 chr3R_8540001 RAL-307_100b 3027 chr3R 8570454 8570511 chr3R 8575113 8575171 HMS-Beagle 55 4656 7.5 15.0 11.2 4.5 4717 chr3R 8570454 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575171 intergenic not near genes chr3R_55_8570001 chr3R_8570001 RAL-307_100b 3028 chr3R 8582948 8582973 chr3R 8583059 8583085 25 109 34.0 24.0 29.0 0.8 137 chr3R 8582948 intron 5-HT2B + chr3R 8583016 intron 5-HT2B + chr3R 8583085 intron 5-HT2B + chr3R_25_8580001 chr3R_8580001 RAL-307_100b 3029 chr3R 8601750 8601759 chr3R 8610928 8610931 roo 6 9177 41.0 20.5 30.8 0.2 9181 chr3R 8601750 intron 5-HT2B + chr3R 8606340 intron 5-HT2B + chr3R 8610931 intron 5-HT2B + chr3R_6_8605001 chr3R_8605001 RAL-307_100b 3030 chr3R 8601760 8601765 chr3R 8610927 8610931 roo 8 9173 38.5 19.5 29.0 0.3 9171 chr3R 8601760 intron 5-HT2B + chr3R 8606346 intron 5-HT2B + chr3R 8610931 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 RAL-307_100b 3031 chr3R 8601767 8601797 chr3R 8610923 8610958 roo 25 9173 21.5 18.0 19.8 1.2 9191 chr3R 8601767 intron 5-HT2B + chr3R 8606362 intron 5-HT2B + chr3R 8610958 intron 5-HT2B + chr3R_25_8605001 chr3R_8605001 RAL-307_100b 3032 chr3R 8614791 8614820 chr3R 8614989 8615048 54 221 1.0 12.5 6.8 6.9 257 chr3R 8614791 intron 5-HT2B + chr3R 8614920 intron 5-HT2B + chr3R 8615048 intron 5-HT2B + chr3R_54_8610001 chr3R_8610001 RAL-307_100b 3033 chr3R 8621517 8621566 chr3R 8621619 8621625 18 97 12.0 20.5 16.2 1.0 108 chr3R 8621517 intron 5-HT2B + chr3R 8621571 intron 5-HT2B + chr3R 8621625 intron 5-HT2B + chr3R_18_8620001 chr3R_8620001 RAL-307_100b 3034 chr3R 8642411 8642447 chr3R 8642492 8642544 30 96 13.0 16.0 14.5 1.9 133 chr3R 8642411 intergenic not near genes chr3R 8642478 intergenic not near genes chr3R 8642544 intergenic not near genes chr3R_30_8640001 chr3R_8640001 RAL-307_100b 3035 chr3R 8707331 8707362 chr3R 8709797 8709828 jockey 23 2465 32.5 23.5 28.0 0.8 2497 chr3R 8707331 intergenic not near genes chr3R 8708580 intergenic not near genes chr3R 8709828 intergenic not near genes chr3R_23_8705001 chr3R_8705001 RAL-307_100b 3036 chr3R 8707363 8707383 chr3R 8709796 8709828 jockey 25 2458 21.5 23.0 22.2 1.1 2465 chr3R 8707363 intergenic not near genes chr3R 8708596 intergenic not near genes chr3R 8709828 intergenic not near genes chr3R_25_8705001 chr3R_8705001 RAL-307_100b 3037 chr3R 8745725 8745780 chr3R 8745861 8745916 50 132 13.0 16.5 14.8 3.2 191 chr3R 8745725 intron CG9801 - chr3R 8745820 intron CG9801 - chr3R 8745916 intron CG9801 - chr3R_50_8745001 chr3R_8745001 RAL-307_100b 3038 chr3R 8843488 8843538 chr3R 8843722 8843754 41 231 9.0 15.5 12.2 3.1 266 chr3R 8843488 intron pyd - chr3R 8843621 intron pyd - chr3R 8843754 intron pyd - chr3R_41_8840001 chr3R_8840001 RAL-307_100b 3039 chr3R 8868773 8868783 chr3R 8872642 8872642 297 4 3866 22.0 11.0 16.5 0.2 3869 chr3R 8868773 intron pyd - chr3R 8870708 intron pyd - chr3R 8872642 intron pyd - chr3R_4_8870001 chr3R_8870001 RAL-307_100b 3040 chr3R 8883315 8883317 chr3R 8883419 8883422 4 105 14.0 22.0 18.0 0.2 107 chr3R 8883315 intron pyd - chr3R 8883368 intron pyd - chr3R 8883422 intron pyd - chr3R_4_8880001 chr3R_8880001 RAL-307_100b 3041 chr3R 8883321 8883334 chr3R 8883418 8883430 13 102 7.5 22.0 14.8 0.8 109 chr3R 8883321 intron pyd - chr3R 8883376 intron pyd - chr3R 8883430 intron pyd - chr3R_13_8880001 chr3R_8880001 RAL-307_100b 3042 chr3R 8894850 8894883 chr3R 8896031 8896064 1360 28 1180 24.0 15.0 19.5 1.4 1214 chr3R 8894850 intron pyd - chr3R 8895457 intron pyd - chr3R 8896064 intron pyd - chr3R_28_8895001 chr3R_8895001 RAL-307_100b 3043 chr3R 8894885 8894903 chr3R 8896029 8896084 1360 23 1177 15.5 14.5 15.0 1.4 1199 chr3R 8894885 intron pyd - chr3R 8895484 intron pyd - chr3R 8896084 intron pyd - chr3R_23_8895001 chr3R_8895001 RAL-307_100b 3044 chr3R 8898197 8898212 chr3R 8913802 8913817 297 12 15603 43.0 21.0 32.0 0.4 15620 chr3R 8898197 intron pyd - chr3R 8906007 intron pyd - chr3R 8913817 intron pyd - chr3R_12_8905001 chr3R_8905001 RAL-307_100b 3045 chr3R 9036686 9036746 chr3R 9036807 9036867 41 119 8.0 11.0 9.5 3.9 181 chr3R 9036686 intron neur - chr3R 9036776 intron neur - chr3R 9036867 intron neur - chr3R_41_9035001 chr3R_9035001 RAL-307_100b 3046 chr3R 9108839 9108883 chr3R 9108940 9108969 26 99 17.0 8.5 12.8 1.9 130 chr3R 9108839 intron pum - chr3R 9108904 intron pum - chr3R 9108969 intron pum - chr3R_26_9105001 chr3R_9105001 RAL-307_100b 3047 chr3R 9118841 9118900 chr3R 9119222 9119264 52 377 6.0 13.0 9.5 5.0 423 chr3R 9118841 intron pum - chr3R 9119052 intron pum - chr3R 9119264 intron pum - chr3R_52_9115001 chr3R_9115001 RAL-307_100b 3048 chr3R 9166500 9166518 chr3R 9166862 9166875 13 361 39.5 13.5 26.5 0.5 375 chr3R 9166500 intron pum - chr3R 9166688 intron pum - chr3R 9166875 intron pum - chr3R_13_9165001 chr3R_9165001 RAL-307_100b 3049 chr3R 9166520 9166558 chr3R 9166860 9166921 33 360 16.0 11.5 13.8 2.2 401 chr3R 9166520 intron pum - chr3R 9166720 intron pum - chr3R 9166921 intron pum - chr3R_33_9165001 chr3R_9165001 RAL-307_100b 3050 chr3R 9170305 9170360 chr3R 9170780 9170818 39 478 15.5 23.0 19.2 1.9 513 chr3R 9170305 intron pum - chr3R 9170562 intron pum - chr3R 9170818 intron pum - chr3R_39_9170001 chr3R_9170001 RAL-307_100b 3051 chr3R 9181794 9181851 chr3R 9181902 9181959 55 105 13.5 17.5 15.5 3.3 165 chr3R 9181794 intron pum - chr3R 9181876 intron pum - chr3R 9181959 intron pum - chr3R_55_9180001 chr3R_9180001 RAL-307_100b 3052 chr3R 9278765 9278772 chr3R 9284050 9284057 Rt1a 5 5285 38.5 24.5 31.5 0.2 5292 chr3R 9278765 intergenic not near genes chr3R 9281411 intergenic not near genes chr3R 9284057 intergenic not near genes chr3R_5_9280001 chr3R_9280001 RAL-307_100b 3053 chr3R 9278774 9278777 chr3R 9284046 9284062 Rt1a 7 5282 35.5 23.5 29.5 0.2 5288 chr3R 9278774 intergenic not near genes chr3R 9281418 intergenic not near genes chr3R 9284062 intergenic not near genes chr3R_7_9280001 chr3R_9280001 RAL-307_100b 3054 chr3R 9278781 9278816 chr3R 9284040 9284051 Rt1a 25 5275 16.0 19.5 17.8 1.3 5270 chr3R 9278781 intergenic not near genes chr3R 9281416 intergenic not near genes chr3R 9284051 intergenic not near genes chr3R_25_9280001 chr3R_9280001 RAL-307_100b 3055 chr3R 9289139 9289189 chr3R 9289429 9289479 41 286 10.0 17.0 13.5 2.8 340 chr3R 9289139 intergenic not near genes chr3R 9289309 intergenic not near genes chr3R 9289479 intergenic not near genes chr3R_41_9285001 chr3R_9285001 RAL-307_100b 3056 chr3R 9304513 9304526 chr3R 9311817 9311823 Stalker4 6 7306 42.5 18.5 30.5 0.2 7310 chr3R 9304513 intron CG8861 - chr3R 9308168 intron CG8861 - chr3R 9311823 intron CG8861 - chr3R_6_9305001 chr3R_9305001 RAL-307_100b 3057 chr3R 9304543 9304549 chr3R 9311813 9311825 Stalker4 4 7274 30.0 14.5 22.2 0.2 7282 chr3R 9304543 intron CG8861 - chr3R 9308184 intron CG8861 - chr3R 9311825 intron CG8861 - chr3R_4_9305001 chr3R_9305001 RAL-307_100b 3058 chr3R 9319552 9319604 chr3R 9320012 9320040 jockey 50 456 15.0 19.5 17.2 2.7 488 chr3R 9319552 intron CG8861 - chr3R 9319796 intron CG8861 - chr3R 9320040 intron CG8861 - chr3R_50_9315001 chr3R_9315001 RAL-307_100b 3059 chr3R 9361810 9361817 chr3R 9362063 9362083 pogo 7 264 18.5 8.0 13.2 0.5 273 chr3R 9361810 3` UTR CG45050 + chr3R 9361946 3` UTR CG45050 + chr3R 9362083 3` UTR CG45050 + chr3R_7_9360001 chr3R_9360001 RAL-307_100b 3060 chr3R 9361818 9361844 chr3R 9362059 9362110 pogo 33 262 8.5 8.0 8.2 3.6 292 chr3R 9361818 3` UTR CG45050 + chr3R 9361964 3` UTR CG45050 + chr3R 9362110 3` UTR CG45050 + chr3R_33_9360001 chr3R_9360001 RAL-307_100b 3061 chr3R 9382790 9382849 chr3R 9382940 9382999 64 147 7.5 12.5 10.0 5.8 209 chr3R 9382790 intron FER - chr3R 9382894 intron FER - chr3R 9382999 intron FER - chr3R_64_9380001 chr3R_9380001 RAL-307_100b 3062 chr3R 9418242 9418242 chr3R 22874781 22874824 4 13456562 63.5 36.0 49.8 0.1 13456582 chr3R 9418242 intron ps + chr3R 16146533 exon CG5903 - chr3R 22874824 intergenic not near genes chr3R_4_16145001 chr3R_16145001 RAL-307_100b 3063 chr3R 9447441 9447444 chr3R 9447565 9447568 5 127 22.5 25.5 24.0 0.2 127 chr3R 9447441 intron ps + chr3R 9447504 intron ps + chr3R 9447568 intron ps + chr3R_5_9445001 chr3R_9445001 RAL-307_100b 3064 chr3R 9447445 9447453 chr3R 9447553 9447577 8 125 19.5 19.5 19.5 0.4 132 chr3R 9447445 intron ps + chr3R 9447511 intron ps + chr3R 9447577 intron ps + chr3R_8_9445001 chr3R_9445001 RAL-307_100b 3065 chr3R 9447454 9447457 chr3R 9447548 9447586 4 120 18.0 18.0 18.0 0.2 132 chr3R 9447454 intron ps + chr3R 9447520 intron ps + chr3R 9447586 intron ps + chr3R_4_9445001 chr3R_9445001 RAL-307_100b 3066 chr3R 9586670 9586725 chr3R 9586787 9586842 25 116 12.5 11.0 11.8 2.0 172 chr3R 9586670 intergenic CG8301 +,P58IPK + chr3R 9586756 intergenic CG8301 +,P58IPK + chr3R 9586842 intergenic P58IPK +,CG8301 + chr3R_25_9585001 chr3R_9585001 RAL-307_100b 3067 chr3R 9601438 9601493 chr3R 9601579 9601636 56 140 13.5 11.0 12.2 4.2 198 chr3R 9601438 intron CG8312 + chr3R 9601537 intron CG8312 + chr3R 9601636 intron CG8312 + chr3R_56_9600001 chr3R_9600001 RAL-307_100b 3068 chr3R 9610833 9610849 chr3R 9611000 9611016 9 167 13.0 20.5 16.8 0.5 183 chr3R 9610833 intron CG8312 + chr3R 9610924 intron CG8312 + chr3R 9611016 intron CG8312 + chr3R_9_9610001 chr3R_9610001 RAL-307_100b 3069 chr3R 9610850 9610873 chr3R 9610996 9611038 19 161 8.0 19.5 13.8 1.3 188 chr3R 9610850 intron CG8312 + chr3R 9610944 intron CG8312 + chr3R 9611038 intron CG8312 + chr3R_19_9610001 chr3R_9610001 RAL-307_100b 3070 chr3R 9620956 9620956 chr3R 21907534 21907536 4 12286579 53.0 73.0 63.0 0.1 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-307_100b 3071 chr3R 9702237 9702292 chr3R 9702338 9702393 46 93 12.5 18.0 15.2 2.8 156 chr3R 9702237 intron Unc-115a - chr3R 9702315 intron Unc-115a - chr3R 9702393 intron Unc-115a - chr3R_46_9700001 chr3R_9700001 RAL-307_100b 3072 chr3R 9858659 9858696 chr3R 9858782 9858820 19 123 15.5 8.5 12.0 1.5 161 chr3R 9858659 intron Teh1 - chr3R 9858740 intron Teh1 - chr3R 9858820 intron Teh1 - chr3R_19_9855001 chr3R_9855001 RAL-307_100b 3073 chr3R 9859973 9860002 chr3R 9860110 9860141 25 137 11.0 8.5 9.8 2.3 168 chr3R 9859973 intron Teh1 - chr3R 9860057 intron Teh1 - chr3R 9860141 intron Teh1 - chr3R_25_9860001 chr3R_9860001 RAL-307_100b 3074 chr3R 9877995 9878026 chr3R 9878108 9878112 25 110 17.5 16.5 17.0 1.4 117 chr3R 9877995 intron,intron Glut4EF +,CR45029 - chr3R 9878054 intron,intron Glut4EF +,CR45029 - chr3R 9878112 intron,intron Glut4EF +,CR45029 - chr3R_25_9875001 chr3R_9875001 RAL-307_100b 3075 chr3R 10231774 10231815 chr3R 10237366 10237417 mdg3 47 5597 10.0 24.0 17.0 2.6 5643 chr3R 10231774 intron CG42795 + chr3R 10234596 intron CG42795 + chr3R 10237417 intron CG42795 + chr3R_47_10230001 chr3R_10230001 RAL-307_100b 3076 chr3R 10255356 10255383 chr3R 10260821 10260848 I-element 26 5464 24.5 19.5 22.0 1.1 5492 chr3R 10255356 3` UTR Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260848 exon Sirt6 - chr3R_26_10255001 chr3R_10255001 RAL-307_100b 3077 chr3R 10306953 10307012 chr3R 10312187 10312246 62 5235 138.0 105.5 121.8 0.5 5293 chr3R 10306953 exon CG43143 + chr3R 10309600 exon CG6293 - chr3R 10312246 3` UTR Bruce - chr3R_62_10305001 chr3R_10305001 RAL-307_100b 3078 chr3R 10394050 10394072 chr3R 10394174 10394196 24 122 31.5 21.0 26.2 0.9 146 chr3R 10394050 intron cwo + chr3R 10394123 intron cwo + chr3R 10394196 intron cwo + chr3R_24_10390001 chr3R_10390001 RAL-307_100b 3079 chr3R 10394074 10394098 chr3R 10394168 10394222 32 120 19.5 18.5 19.0 1.6 148 chr3R 10394074 intron cwo + chr3R 10394148 intron cwo + chr3R 10394222 intron cwo + chr3R_32_10390001 chr3R_10390001 RAL-307_100b 3080 chr3R 10427396 10427404 chr3R 10427531 10427534 7 134 35.0 0.0 17.5 0.4 138 chr3R 10427396 intergenic not near genes chr3R 10427465 intergenic not near genes chr3R 10427534 intergenic not near genes chr3R_7_10425001 chr3R_10425001 RAL-307_100b 3081 chr3R 10430649 10430657 chr3R 10430763 10430771 9 113 46.5 17.5 32.0 0.3 122 chr3R 10430649 intergenic not near genes chr3R 10430710 intergenic not near genes chr3R 10430771 intergenic not near genes chr3R_9_10430001 chr3R_10430001 RAL-307_100b 3082 chr3R 10430659 10430707 chr3R 10430762 10430814 56 110 14.5 16.5 15.5 3.4 155 chr3R 10430659 intergenic not near genes chr3R 10430736 intergenic not near genes chr3R 10430814 intergenic not near genes chr3R_56_10430001 chr3R_10430001 RAL-307_100b 3083 chr3R 10526278 10526318 chr3R 10526566 10526606 17 282 13.0 13.0 13.0 1.2 328 chr3R 10526278 intron hth - chr3R 10526442 intron hth - chr3R 10526606 intron hth - chr3R_17_10525001 chr3R_10525001 RAL-307_100b 3084 chr3R 10596608 10596650 chr3R 10596699 10596747 23 89 17.0 14.5 15.8 1.4 139 chr3R 10596608 intron hth - chr3R 10596678 intron hth - chr3R 10596747 intron hth - chr3R_23_10595001 chr3R_10595001 RAL-307_100b 3085 chr3R 10624582 10624584 chr3R 30249886 30249888 4 19625304 75.5 31.5 53.5 0.1 19625306 chr3R 10624582 intergenic not near genes chr3R 20437235 intron Gfrl - chr3R 30249888 exon CG34299 + chr3R_4_20435001 chr3R_20435001 RAL-307_100b 3086 chr3R 10651785 10651843 chr3R 10651909 10651935 32 118 24.5 10.0 17.2 1.8 150 chr3R 10651785 intergenic not near genes chr3R 10651860 intergenic not near genes chr3R 10651935 intergenic not near genes chr3R_32_10650001 chr3R_10650001 RAL-307_100b 3087 chr3R 10723738 10723795 chr3R 10723855 10723892 44 114 12.0 0.0 6.0 6.3 154 chr3R 10723738 intergenic not near genes chr3R 10723815 intergenic not near genes chr3R 10723892 intergenic not near genes chr3R_44_10720001 chr3R_10720001 RAL-307_100b 3088 chr3R 10727618 10727678 chr3R 10727723 10727783 59 100 16.5 16.5 16.5 3.4 165 chr3R 10727618 intergenic not near genes chr3R 10727700 intergenic not near genes chr3R 10727783 intergenic not near genes chr3R_59_10725001 chr3R_10725001 RAL-307_100b 3089 chr3R 10732303 10732344 chr3R 10733200 10733221 41 895 9.5 17.5 13.5 2.8 918 chr3R 10732303 intergenic not near genes chr3R 10732762 intergenic not near genes chr3R 10733221 intergenic not near genes chr3R_41_10730001 chr3R_10730001 RAL-307_100b 3090 chr3R 10848504 10848504 chr3R 23204792 23204803 4 12356292 69.0 9.0 39.0 0.1 12356299 chr3R 10848504 3` UTR Cad86C + chr3R 17026654 exon Pxd + chr3R 23204803 intron cnc - chr3R_4_17025001 chr3R_17025001 RAL-307_100b 3091 chr3R 10868569 10868587 chr3R 10868671 10868690 8 100 36.0 16.0 26.0 0.3 121 chr3R 10868569 5` UTR SelR - chr3R 10868630 5` UTR SelR - chr3R 10868690 intergenic Tsp86D +,SelR - chr3R_8_10865001 chr3R_10865001 RAL-307_100b 3092 chr3R 10868588 10868622 chr3R 10868668 10868701 30 86 19.5 15.5 17.5 1.6 113 chr3R 10868588 5` UTR SelR - chr3R 10868644 intergenic SelR -,Tsp86D + chr3R 10868701 intergenic Tsp86D +,SelR - chr3R_30_10865001 chr3R_10865001 RAL-307_100b 3093 chr3R 10904883 10904937 chr3R 10905112 10905134 51 227 8.5 13.5 11.0 4.2 251 chr3R 10904883 intergenic not near genes chr3R 10905008 intergenic not near genes chr3R 10905134 intergenic not near genes chr3R_51_10905001 chr3R_10905001 RAL-307_100b 3094 chr3R 10906810 10906857 chr3R 10906907 10906958 56 98 14.5 17.0 15.8 3.3 148 chr3R 10906810 intergenic not near genes chr3R 10906884 intergenic not near genes chr3R 10906958 intergenic not near genes chr3R_56_10905001 chr3R_10905001 RAL-307_100b 3095 chr3R 10919661 10919718 chr3R 10919764 10919808 52 102 18.5 12.0 15.2 3.2 147 chr3R 10919661 intergenic not near genes chr3R 10919734 intergenic not near genes chr3R 10919808 intergenic not near genes chr3R_52_10915001 chr3R_10915001 RAL-307_100b 3096 chr3R 10920023 10920025 chr3R 10920125 10920128 4 103 36.0 20.5 28.2 0.1 105 chr3R 10920023 intergenic not near genes chr3R 10920076 intergenic not near genes chr3R 10920128 intergenic not near genes chr3R_4_10920001 chr3R_10920001 RAL-307_100b 3097 chr3R 10920032 10920077 chr3R 10920124 10920180 37 100 18.5 19.5 19.0 1.9 148 chr3R 10920032 intergenic not near genes chr3R 10920106 intergenic not near genes chr3R 10920180 intergenic not near genes chr3R_37_10920001 chr3R_10920001 RAL-307_100b 3098 chr3R 10957838 10957885 chr3R 10963252 10963299 Rt1c 40 5408 21.5 18.0 19.8 1.9 5461 chr3R 10957838 intergenic not near genes chr3R 10960568 intergenic not near genes chr3R 10963299 intergenic not near genes chr3R_40_10960001 chr3R_10960001 RAL-307_100b 3099 chr3R 10971470 10971487 chr3R 10971576 10971592 17 112 35.0 17.0 26.0 0.6 122 chr3R 10971470 intergenic not near genes chr3R 10971531 intergenic not near genes chr3R 10971592 intergenic not near genes chr3R_17_10970001 chr3R_10970001 RAL-307_100b 3100 chr3R 10971488 10971515 chr3R 10971570 10971590 24 106 18.0 14.5 16.2 1.4 102 chr3R 10971488 intergenic not near genes chr3R 10971539 intergenic not near genes chr3R 10971590 intergenic not near genes chr3R_24_10970001 chr3R_10970001 RAL-307_100b 3101 chr3R 10998442 10998469 chr3R 10998544 10998566 19 101 21.0 19.0 20.0 0.9 124 chr3R 10998442 intron CG34114 + chr3R 10998504 intron CG34114 + chr3R 10998566 intron CG34114 + chr3R_19_10995001 chr3R_10995001 RAL-307_100b 3102 chr3R 11043069 11043126 chr3R 11043200 11043257 52 126 10.5 12.5 11.5 4.2 188 chr3R 11043069 intron CG34114 + chr3R 11043163 intron CG34114 + chr3R 11043257 intron CG34114 + chr3R_52_11040001 chr3R_11040001 RAL-307_100b 3103 chr3R 11056870 11056908 chr3R 11056973 11057001 19 101 10.0 0.0 5.0 3.2 131 chr3R 11056870 intergenic not near genes chr3R 11056936 intergenic not near genes chr3R 11057001 intergenic not near genes chr3R_19_11055001 chr3R_11055001 RAL-307_100b 3104 chr3R 11065573 11065617 chr3R 11071243 11071294 297 6 5666 6.5 8.0 7.2 0.7 5721 chr3R 11065573 intergenic not near genes chr3R 11068434 intergenic not near genes chr3R 11071294 intergenic not near genes chr3R_6_11065001 chr3R_11065001 RAL-307_100b 3105 chr3R 11087412 11087468 chr3R 11087513 11087557 42 96 14.0 13.5 13.8 2.8 145 chr3R 11087412 intergenic not near genes chr3R 11087484 intergenic not near genes chr3R 11087557 intergenic not near genes chr3R_42_11085001 chr3R_11085001 RAL-307_100b 3106 chr3R 11099633 11099689 chr3R 11099790 11099846 52 155 10.0 16.0 13.0 3.7 213 chr3R 11099633 intergenic not near genes chr3R 11099740 intergenic not near genes chr3R 11099846 intergenic not near genes chr3R_52_11095001 chr3R_11095001 RAL-307_100b 3107 chr3R 11102300 11102351 chr3R 11102405 11102441 55 100 23.5 16.5 20.0 2.6 141 chr3R 11102300 intergenic not near genes chr3R 11102370 intergenic not near genes chr3R 11102441 intergenic not near genes chr3R_55_11100001 chr3R_11100001 RAL-307_100b 3108 chr3R 11103145 11103163 chr3R 11103252 11103269 11 107 0.5 0.0 0.2 9.2 124 chr3R 11103145 intergenic not near genes chr3R 11103207 intergenic not near genes chr3R 11103269 intergenic not near genes chr3R_11_11100001 chr3R_11100001 RAL-307_100b 3109 chr3R 11151095 11151144 chr3R 11151315 11151364 38 218 14.0 16.5 15.2 2.3 269 chr3R 11151095 3` UTR Ugt86Di - chr3R 11151230 3` UTR Ugt86Di - chr3R 11151364 3` UTR Ugt86Di - chr3R_38_11150001 chr3R_11150001 RAL-307_100b 3110 chr3R 11197962 11198006 chr3R 11198086 11198130 34 123 12.5 10.5 11.5 2.7 168 chr3R 11197962 intron cu + chr3R 11198046 intron cu + chr3R 11198130 intron cu + chr3R_34_11195001 chr3R_11195001 RAL-307_100b 3111 chr3R 11198009 11198016 chr3R 11198083 11198116 8 103 8.0 9.0 8.5 0.8 107 chr3R 11198009 intron cu + chr3R 11198062 intron cu + chr3R 11198116 intron cu + chr3R_8_11195001 chr3R_11195001 RAL-307_100b 3112 chr3R 11220255 11220300 chr3R 11220399 11220439 55 142 17.0 13.5 15.2 3.4 184 chr3R 11220255 intergenic CG6693 -,CG6689 - chr3R 11220347 3` UTR CG6693 - chr3R 11220439 3` UTR CG6693 - chr3R_55_11220001 chr3R_11220001 RAL-307_100b 3113 chr3R 11220301 11220314 chr3R 11220397 11220421 12 127 10.5 12.0 11.2 1.0 120 chr3R 11220301 3` UTR CG6693 - chr3R 11220361 3` UTR CG6693 - chr3R 11220421 3` UTR CG6693 - chr3R_12_11220001 chr3R_11220001 RAL-307_100b 3114 chr3R 11247218 11247228 chr3R 11247324 11247334 INE-1 4 106 38.0 7.0 22.5 0.2 116 chr3R 11247218 intergenic CG5214 +,CR43283 - chr3R 11247276 intergenic CR43283 -,CG5214 + chr3R 11247334 intergenic CR43283 -,CG5214 + chr3R_4_11245001 chr3R_11245001 RAL-307_100b 3115 chr3R 11307168 11307185 chr3R 11307280 11307297 17 112 33.0 16.0 24.5 0.7 129 chr3R 11307168 intergenic not near genes chr3R 11307232 intergenic not near genes chr3R 11307297 intergenic not near genes chr3R_17_11305001 chr3R_11305001 RAL-307_100b 3116 chr3R 11307186 11307220 chr3R 11307279 11307296 35 103 20.0 15.5 17.8 1.9 110 chr3R 11307186 intergenic not near genes chr3R 11307241 intergenic not near genes chr3R 11307296 intergenic not near genes chr3R_35_11305001 chr3R_11305001 RAL-307_100b 3117 chr3R 11342517 11342548 chr3R 11342618 11342649 14 99 29.5 12.0 20.8 0.6 132 chr3R 11342517 intron pros + chr3R 11342583 intron pros + chr3R 11342649 intron pros + chr3R_14_11340001 chr3R_11340001 RAL-307_100b 3118 chr3R 11342552 11342574 chr3R 11342617 11342672 33 97 13.5 12.0 12.8 2.4 120 chr3R 11342552 intron pros + chr3R 11342612 intron pros + chr3R 11342672 intron pros + chr3R_33_11340001 chr3R_11340001 RAL-307_100b 3119 chr3R 11379212 11379264 chr3R 11388392 11388421 roo 35 9173 12.5 17.0 14.8 2.2 9209 chr3R 11379212 intron pros + chr3R 11383816 intron pros + chr3R 11388421 intron pros + chr3R_35_11380001 chr3R_11380001 RAL-307_100b 3120 chr3R 11404916 11404971 chr3R 11405021 11405076 56 102 12.5 17.5 15.0 3.5 160 chr3R 11404916 3` UTR pros + chr3R 11404996 3` UTR pros + chr3R 11405076 3` UTR pros + chr3R_56_11400001 chr3R_11400001 RAL-307_100b 3121 chr3R 11442329 11442369 chr3R 11442523 11442579 44 205 17.5 17.5 17.5 2.4 250 chr3R 11442329 intron,intron sals -,CG17230 + chr3R 11442454 intron,intron sals -,CG17230 + chr3R 11442579 intron,intron sals -,CG17230 + chr3R_44_11440001 chr3R_11440001 RAL-307_100b 3122 chr3R 11518795 11518800 chr3R 11518911 11518916 6 116 30.0 20.0 25.0 0.2 121 chr3R 11518795 intergenic not near genes chr3R 11518856 intergenic not near genes chr3R 11518916 intergenic not near genes chr3R_6_11515001 chr3R_11515001 RAL-307_100b 3123 chr3R 11518801 11518824 chr3R 11518909 11518940 27 113 21.0 19.0 20.0 1.3 139 chr3R 11518801 intergenic not near genes chr3R 11518870 intergenic not near genes chr3R 11518940 intergenic not near genes chr3R_27_11515001 chr3R_11515001 RAL-307_100b 3124 chr3R 11518826 11518848 chr3R 11518907 11518944 21 112 11.5 16.5 14.0 1.4 118 chr3R 11518826 intergenic not near genes chr3R 11518885 intergenic not near genes chr3R 11518944 intergenic not near genes chr3R_21_11515001 chr3R_11515001 RAL-307_100b 3125 chr3R 11664765 11664822 chr3R 11664882 11664934 60 114 13.0 20.0 16.5 3.4 169 chr3R 11664765 intron CG42327 + chr3R 11664850 intron CG42327 + chr3R 11664934 intron CG42327 + chr3R_60_11660001 chr3R_11660001 RAL-307_100b 3126 chr3R 11694702 11694748 chr3R 11694820 11694866 37 116 15.5 18.5 17.0 2.1 164 chr3R 11694702 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694866 intergenic not near genes chr3R_37_11690001 chr3R_11690001 RAL-307_100b 3127 chr3R 11734135 11734190 chr3R 11734279 11734330 50 138 13.5 15.0 14.2 3.3 195 chr3R 11734135 intergenic not near genes chr3R 11734232 intergenic not near genes chr3R 11734330 intergenic not near genes chr3R_50_11730001 chr3R_11730001 RAL-307_100b 3128 chr3R 11740434 11740467 chr3R 11743516 11743575 121 3085 156.0 210.0 183.0 0.7 3141 chr3R 11740434 exon Blm - chr3R 11742004 5` UTR CG14722 + chr3R 11743575 exon CG14722 + chr3R_121_11740001 chr3R_11740001 RAL-307_100b 3129 chr3R 11830326 11830360 chr3R 11830435 11830469 22 108 13.0 12.0 12.5 1.6 143 chr3R 11830326 intron CG6959 - chr3R 11830398 intron CG6959 - chr3R 11830469 intron CG6959 - chr3R_22_11830001 chr3R_11830001 RAL-307_100b 3130 chr3R 11830952 11830962 chr3R 11831121 11831131 8 168 8.0 9.5 8.8 0.8 179 chr3R 11830952 intron CG6959 - chr3R 11831042 intron CG6959 - chr3R 11831131 intron CG6959 - chr3R_8_11830001 chr3R_11830001 RAL-307_100b 3131 chr3R 11841037 11841096 chr3R 11846253 11846299 BS 53 5212 17.5 20.0 18.8 2.7 5262 chr3R 11841037 intron CG6959 - chr3R 11843668 intron CG6959 - chr3R 11846299 intron CG6959 - chr3R_53_11840001 chr3R_11840001 RAL-307_100b 3132 chr3R 11853409 11853473 chr3R 11853583 11853623 45 172 0.5 18.5 9.5 4.3 214 chr3R 11853409 intron CG6959 - chr3R 11853516 intron CG6959 - chr3R 11853623 intron CG6959 - chr3R_45_11850001 chr3R_11850001 RAL-307_100b 3133 chr3R 11853746 11853772 chr3R 11853876 11853901 31 128 32.0 16.0 24.0 1.2 155 chr3R 11853746 intron CG6959 - chr3R 11853824 intron CG6959 - chr3R 11853901 intron CG6959 - chr3R_31_11850001 chr3R_11850001 RAL-307_100b 3134 chr3R 11853773 11853801 chr3R 11853873 11853931 34 124 18.5 14.0 16.2 2.0 158 chr3R 11853773 intron CG6959 - chr3R 11853852 intron CG6959 - chr3R 11853931 intron CG6959 - chr3R_34_11850001 chr3R_11850001 RAL-307_100b 3135 chr3R 11920949 11920986 chr3R 11921071 11921108 31 113 27.5 9.5 18.5 1.6 159 chr3R 11920949 intron Cad87A - chr3R 11921028 intron Cad87A - chr3R 11921108 intron Cad87A - chr3R_31_11920001 chr3R_11920001 RAL-307_100b 3136 chr3R 11920987 11921002 chr3R 11921070 11921123 25 105 19.0 9.0 14.0 1.7 136 chr3R 11920987 intron Cad87A - chr3R 11921055 intron Cad87A - chr3R 11921123 intron Cad87A - chr3R_25_11920001 chr3R_11920001 RAL-307_100b 3137 chr3R 11990627 11990683 chr3R 11990740 11990796 14 110 7.5 7.5 7.5 1.6 169 chr3R 11990627 intron mfas - chr3R 11990712 intron mfas - chr3R 11990796 intron mfas - chr3R_14_11990001 chr3R_11990001 RAL-307_100b 3138 chr3R 11998940 11998965 chr3R 11999080 11999105 23 140 8.5 14.0 11.2 1.9 165 chr3R 11998940 intron Tk - chr3R 11999022 intron Tk - chr3R 11999105 intron Tk - chr3R_23_11995001 chr3R_11995001 RAL-307_100b 3139 chr3R 12017018 12017021 chr3R 12017120 12017123 6 102 19.0 31.0 25.0 0.2 105 chr3R 12017018 5` UTR CG3313 - chr3R 12017070 intergenic CG3313 -,Spt3 + chr3R 12017123 intergenic Spt3 +,CG3313 - chr3R_6_12015001 chr3R_12015001 RAL-307_100b 3140 chr3R 12022859 12022912 chr3R 12025061 12025114 pogo 39 2198 13.0 14.5 13.8 2.6 2255 chr3R 12022859 intergenic not near genes chr3R 12023986 intergenic not near genes chr3R 12025114 intergenic not near genes chr3R_39_12020001 chr3R_12020001 RAL-307_100b 3141 chr3R 12029907 12029959 chr3R 12030019 12030071 60 109 14.0 15.0 14.5 3.9 164 chr3R 12029907 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029989 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030071 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_60_12025001 chr3R_12025001 RAL-307_100b 3142 chr3R 12045153 12045200 chr3R 12045252 12045301 32 99 11.5 11.0 11.2 2.6 148 chr3R 12045153 intergenic not near genes chr3R 12045227 intergenic not near genes chr3R 12045301 intergenic not near genes chr3R_32_12045001 chr3R_12045001 RAL-307_100b 3143 chr3R 12081981 12081983 chr3R 12082076 12082084 5 100 41.0 8.0 24.5 0.2 103 chr3R 12081981 intron CG14741 - chr3R 12082032 intron CG14741 - chr3R 12082084 intron CG14741 - chr3R_5_12080001 chr3R_12080001 RAL-307_100b 3144 chr3R 12081984 12082028 chr3R 12082075 12082125 51 99 14.0 8.0 11.0 4.2 141 chr3R 12081984 intron CG14741 - chr3R 12082054 intron CG14741 - chr3R 12082125 intron CG14741 - chr3R_51_12080001 chr3R_12080001 RAL-307_100b 3145 chr3R 12169209 12169221 chr3R 12169312 12169324 7 103 33.5 17.0 25.2 0.3 115 chr3R 12169209 intergenic not near genes chr3R 12169266 intergenic not near genes chr3R 12169324 intergenic not near genes chr3R_7_12165001 chr3R_12165001 RAL-307_100b 3146 chr3R 12176656 12176708 chr3R 12176775 12176815 45 113 13.0 13.0 13.0 3.2 159 chr3R 12176656 intergenic not near genes chr3R 12176736 intergenic not near genes chr3R 12176815 intergenic not near genes chr3R_45_12175001 chr3R_12175001 RAL-307_100b 3147 chr3R 12183151 12183207 chr3R 12183262 12183318 44 109 13.5 14.0 13.8 3.0 167 chr3R 12183151 intergenic not near genes chr3R 12183234 intergenic not near genes chr3R 12183318 intergenic not near genes chr3R_44_12180001 chr3R_12180001 RAL-307_100b 3148 chr3R 12247117 12247173 chr3R 12247227 12247250 36 104 15.5 12.0 13.8 2.4 133 chr3R 12247117 intergenic not near genes chr3R 12247184 intergenic not near genes chr3R 12247250 intergenic not near genes chr3R_36_12245001 chr3R_12245001 RAL-307_100b 3149 chr3R 12267831 12267889 chr3R 12267936 12267994 52 102 14.5 12.0 13.2 3.7 163 chr3R 12267831 intron svp + chr3R 12267912 intron svp + chr3R 12267994 intron svp + chr3R_52_12265001 chr3R_12265001 RAL-307_100b 3150 chr3R 12274648 12274692 chr3R 12274799 12274843 34 147 17.0 13.5 15.2 2.1 195 chr3R 12274648 intron svp + chr3R 12274746 intron svp + chr3R 12274843 intron svp + chr3R_34_12270001 chr3R_12270001 RAL-307_100b 3151 chr3R 12274693 12274702 chr3R 12274798 12274853 8 140 12.5 13.0 12.8 0.6 160 chr3R 12274693 intron svp + chr3R 12274773 intron svp + chr3R 12274853 intron svp + chr3R_8_12270001 chr3R_12270001 RAL-307_100b 3152 chr3R 12297635 12297644 chr3R 12297731 12297746 8 101 35.5 38.0 36.8 0.2 111 chr3R 12297635 intron svp + chr3R 12297690 intron svp + chr3R 12297746 intron svp + chr3R_8_12295001 chr3R_12295001 RAL-307_100b 3153 chr3R 12307207 12307263 chr3R 12307315 12307361 48 106 15.0 18.0 16.5 2.7 154 chr3R 12307207 intergenic not near genes chr3R 12307284 intergenic not near genes chr3R 12307361 intergenic not near genes chr3R_48_12305001 chr3R_12305001 RAL-307_100b 3154 chr3R 12383845 12383859 chr3R 12383969 12383983 14 123 24.5 28.0 26.2 0.5 138 chr3R 12383845 intron GstD11 + chr3R 12383914 intron GstD11 + chr3R 12383983 intron GstD11 + chr3R_14_12380001 chr3R_12380001 RAL-307_100b 3155 chr3R 12392865 12392901 chr3R 12392990 12393026 40 120 20.0 31.0 25.5 1.5 161 chr3R 12392865 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392946 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393026 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_40_12390001 chr3R_12390001 RAL-307_100b 3156 chr3R 12522327 12522386 chr3R 12522437 12522486 50 99 18.5 22.5 20.5 2.3 159 chr3R 12522327 5` UTR Octbeta3R - chr3R 12522406 5` UTR Octbeta3R - chr3R 12522486 5` UTR Octbeta3R - chr3R_50_12520001 chr3R_12520001 RAL-307_100b 3157 chr3R 12599352 12599361 chr3R 12599460 12599464 5 107 33.0 17.0 25.0 0.2 112 chr3R 12599352 intergenic not near genes chr3R 12599408 intergenic not near genes chr3R 12599464 intergenic not near genes chr3R_5_12595001 chr3R_12595001 RAL-307_100b 3158 chr3R 12599364 12599405 chr3R 12599456 12599508 40 101 9.5 13.5 11.5 3.2 144 chr3R 12599364 intergenic not near genes chr3R 12599436 intergenic not near genes chr3R 12599508 intergenic not near genes chr3R_40_12595001 chr3R_12595001 RAL-307_100b 3159 chr3R 846553 846553 chr3R 12622200 12622216 7 11775650 43.5 72.5 58.0 0.1 11775663 chr3R 846553 intron CG42621 + chr3R 6734384 intron pb - chr3R 12622216 intergenic not near genes chr3R_7_6730001 chr3R_6730001 RAL-307_100b 3160 chr3R 12710209 12710253 chr3R 12713303 12713347 42 3097 156.0 114.0 135.0 0.3 3138 chr3R 12710209 exon mus308 - chr3R 12711778 exon mus308 - chr3R 12713347 3` UTR Men - chr3R_42_12710001 chr3R_12710001 RAL-307_100b 3161 chr3R 12725918 12725933 chr3R 12726048 12726051 10 127 41.5 12.0 26.8 0.4 133 chr3R 12725918 intergenic not near genes chr3R 12725984 intergenic not near genes chr3R 12726051 intergenic not near genes chr3R_10_12725001 chr3R_12725001 RAL-307_100b 3162 chr3R 12725937 12725970 chr3R 12726047 12726085 35 122 16.0 12.0 14.0 2.3 148 chr3R 12725937 intergenic not near genes chr3R 12726011 intergenic not near genes chr3R 12726085 intergenic not near genes chr3R_35_12725001 chr3R_12725001 RAL-307_100b 3163 chr3R 12735155 12735184 chr3R 12735430 12735459 28 274 8.0 14.0 11.0 2.3 304 chr3R 12735155 intergenic not near genes chr3R 12735307 intergenic not near genes chr3R 12735459 intergenic not near genes chr3R_28_12735001 chr3R_12735001 RAL-307_100b 3164 chr3R 12748936 12748992 chr3R 12749054 12749108 54 115 7.5 14.5 11.0 4.5 172 chr3R 12748936 intron beat-Vc - chr3R 12749022 intron beat-Vc - chr3R 12749108 intron beat-Vc - chr3R_54_12745001 chr3R_12745001 RAL-307_100b 3165 chr3R 12763114 12763153 chr3R 12763216 12763255 27 101 1.5 21.0 11.2 2.2 141 chr3R 12763114 intron beat-Vc - chr3R 12763184 intron beat-Vc - chr3R 12763255 intron beat-Vc - chr3R_27_12760001 chr3R_12760001 RAL-307_100b 3166 chr3R 12787914 12787954 chr3R 12788022 12788062 39 106 15.0 11.5 13.2 2.7 148 chr3R 12787914 intergenic not near genes chr3R 12787988 intergenic not near genes chr3R 12788062 intergenic not near genes chr3R_39_12785001 chr3R_12785001 RAL-307_100b 3167 chr3R 12839458 12839505 chr3R 12839973 12840023 48 514 13.0 8.0 10.5 4.2 565 chr3R 12839458 intergenic not near genes chr3R 12839740 intergenic not near genes chr3R 12840023 intergenic not near genes chr3R_48_12835001 chr3R_12835001 RAL-307_100b 3168 chr3R 12864557 12864588 chr3R 12865067 12865098 roo 9 508 5.0 10.5 7.8 1.0 541 chr3R 12864557 intergenic not near genes chr3R 12864828 intergenic not near genes chr3R 12865098 intergenic not near genes chr3R_9_12860001 chr3R_12860001 RAL-307_100b 3169 chr3R 12866462 12866517 chr3R 12866638 12866693 60 174 10.5 14.5 12.5 4.4 231 chr3R 12866462 intergenic not near genes chr3R 12866578 intergenic not near genes chr3R 12866693 intergenic not near genes chr3R_60_12865001 chr3R_12865001 RAL-307_100b 3170 chr3R 12920134 12920184 chr3R 12925362 12925404 copia 43 5225 10.0 16.0 13.0 3.1 5270 chr3R 12920134 intron beat-Vb + chr3R 12922769 intron beat-Vb + chr3R 12925404 intron beat-Vb + chr3R_43_12920001 chr3R_12920001 RAL-307_100b 3171 chr3R 13045789 13045823 chr3R 13053000 13053039 60 7220 159.0 175.0 167.0 0.4 7250 chr3R 13045789 exon Hsc70-2 + chr3R 13049414 3` UTR CG7966 - chr3R 13053039 intron pic + chr3R_60_13045001 chr3R_13045001 RAL-307_100b 3172 chr3R 13059939 13059976 chr3R 13060159 13060196 33 219 15.5 14.5 15.0 2.1 257 chr3R 13059939 intron sim + chr3R 13060068 intron sim + chr3R 13060196 intron sim + chr3R_33_13060001 chr3R_13060001 RAL-307_100b 3173 chr3R 13066979 13067134 chr3R 13067091 13067228 52 104 4.5 0.0 2.2 16.2 249 chr3R 13066979 intron sim + chr3R 13067104 intron sim + chr3R 13067228 intron sim + chr3R_52_13065001 chr3R_13065001 RAL-307_100b 3174 chr3R 13103998 13104002 chr3R 13104100 13104104 6 102 11.5 1.0 6.2 0.8 106 chr3R 13103998 intron timeout + chr3R 13104051 intron timeout + chr3R 13104104 intron timeout + chr3R_6_13100001 chr3R_13100001 RAL-307_100b 3175 chr3R 13120748 13120801 chr3R 13120850 13120903 61 97 18.0 17.5 17.8 3.2 155 chr3R 13120748 intron timeout + chr3R 13120826 intron timeout + chr3R 13120903 intron timeout + chr3R_61_13120001 chr3R_13120001 RAL-307_100b 3176 chr3R 13135802 13135857 chr3R 13138002 13138057 pogo 38 2199 17.0 17.0 17.0 2.1 2255 chr3R 13135802 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136930 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138057 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_38_13135001 chr3R_13135001 RAL-307_100b 3177 chr3R 13143014 13143066 chr3R 13148615 13148667 mdg3 65 5594 15.0 18.5 16.8 3.7 5653 chr3R 13143014 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148667 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_65_13145001 chr3R_13145001 RAL-307_100b 3178 chr3R 13194071 13194081 chr3R 13194685 13194694 13 614 32.0 13.5 22.8 0.5 623 chr3R 13194071 intergenic not near genes chr3R 13194382 intergenic not near genes chr3R 13194694 intergenic not near genes chr3R_13_13190001 chr3R_13190001 RAL-307_100b 3179 chr3R 13194083 13194125 chr3R 13194683 13194739 36 612 14.0 13.0 13.5 2.5 656 chr3R 13194083 intergenic not near genes chr3R 13194411 intergenic not near genes chr3R 13194739 intergenic not near genes chr3R_36_13190001 chr3R_13190001 RAL-307_100b 3180 chr3R 13195925 13195982 chr3R 13196045 13196102 62 114 18.0 7.0 12.5 4.6 177 chr3R 13195925 intergenic not near genes chr3R 13196014 intergenic not near genes chr3R 13196102 intergenic not near genes chr3R_62_13195001 chr3R_13195001 RAL-307_100b 3181 chr3R 13311470 13311471 chr3R 13311547 13311598 4 108 83.5 85.0 84.2 0.0 128 chr3R 13311470 exon CG32473 + chr3R 13311534 exon CG32473 + chr3R 13311598 exon CG32473 + chr3R_4_13310001 chr3R_13310001 RAL-307_100b 3182 chr3R 13311636 13311641 chr3R 13318893 13318917 Doc 11 7273 85.5 17.5 51.5 0.2 7281 chr3R 13311636 exon CG32473 + chr3R 13315276 intergenic not near genes chr3R 13318917 intergenic CG45080 - chr3R_11_13315001 chr3R_13315001 RAL-307_100b 3183 chr3R 13313914 13313916 chr3R 13318882 13318898 Doc 10 4975 0.0 12.5 6.2 1.4 4984 chr3R 13313914 intergenic not near genes chr3R 13316406 intergenic not near genes chr3R 13318898 intergenic CG45080 - chr3R_10_13315001 chr3R_13315001 RAL-307_100b 3184 chr3R 13391611 13391665 chr3R 13391714 13391753 56 99 25.0 23.0 24.0 2.2 142 chr3R 13391611 intron CCHa2 - chr3R 13391682 intron CCHa2 - chr3R 13391753 intron CCHa2 - chr3R_56_13390001 chr3R_13390001 RAL-307_100b 3185 chr3R 13394647 13394658 chr3R 13395021 13395032 11 374 28.5 16.5 22.5 0.5 385 chr3R 13394647 intron CCHa2 - chr3R 13394840 intron CCHa2 - chr3R 13395032 intron CCHa2 - chr3R_11_13390001 chr3R_13390001 RAL-307_100b 3186 chr3R 13394661 13394709 chr3R 13395020 13395058 55 367 8.5 16.5 12.5 4.1 397 chr3R 13394661 intron CCHa2 - chr3R 13394860 intron CCHa2 - chr3R 13395058 intron CCHa2 - chr3R_55_13390001 chr3R_13390001 RAL-307_100b 3187 chr3R 13400993 13401001 chr3R 13401109 13401117 8 116 29.0 0.5 14.8 0.5 124 chr3R 13400993 intron CG9796 - chr3R 13401055 intron CG9796 - chr3R 13401117 intron CG9796 - chr3R_8_13400001 chr3R_13400001 RAL-307_100b 3188 chr3R 13401002 13401047 chr3R 13401107 13401163 38 114 10.0 0.5 5.2 6.1 161 chr3R 13401002 intron CG9796 - chr3R 13401082 intron CG9796 - chr3R 13401163 intron CG9796 - chr3R_38_13400001 chr3R_13400001 RAL-307_100b 3189 chr3R 13418649 13418684 chr3R 13418741 13418758 39 99 13.5 8.5 11.0 3.2 109 chr3R 13418649 intergenic not near genes chr3R 13418704 intergenic not near genes chr3R 13418758 intergenic not near genes chr3R_39_13415001 chr3R_13415001 RAL-307_100b 3190 chr3R 13478991 13478992 chr3R 13479086 13479093 5 100 25.5 31.0 28.2 0.2 102 chr3R 13478991 intergenic CR45589 + chr3R 13479042 intergenic CR45589 + chr3R 13479093 intergenic CR45589 + chr3R_5_13475001 chr3R_13475001 RAL-307_100b 3191 chr3R 13478993 13478997 chr3R 13479083 13479098 6 98 23.0 29.0 26.0 0.2 105 chr3R 13478993 intergenic CR45589 + chr3R 13479046 intergenic CR45589 + chr3R 13479098 intergenic CR45589 + chr3R_6_13475001 chr3R_13475001 RAL-307_100b 3192 chr3R 13479000 13479003 chr3R 13479081 13479104 7 95 18.5 27.0 22.8 0.3 104 chr3R 13479000 intergenic CR45589 + chr3R 13479052 intergenic CR45589 + chr3R 13479104 intergenic CR45589 + chr3R_7_13475001 chr3R_13475001 RAL-307_100b 3193 chr3R 13487507 13487510 chr3R 19199405 19199408 6 5711898 35.0 69.5 52.2 0.1 5711901 chr3R 13487507 intergenic not near genes chr3R 16343458 exon pad + chr3R 19199408 intron CG31475 + chr3R_6_16340001 chr3R_16340001 RAL-307_100b 3194 chr3R 13505835 13505868 chr3R 13505931 13505969 30 98 20.0 10.5 15.2 1.9 134 chr3R 13505835 intergenic not near genes chr3R 13505902 intergenic not near genes chr3R 13505969 intergenic not near genes chr3R_30_13505001 chr3R_13505001 RAL-307_100b 3195 chr3R 13517202 13517255 chr3R 13520044 13520097 jockey 16 2841 11.5 0.0 5.8 2.4 2895 chr3R 13517202 intergenic not near genes chr3R 13518650 intergenic not near genes chr3R 13520097 intergenic not near genes chr3R_16_13515001 chr3R_13515001 RAL-307_100b 3196 chr3R 13525163 13525175 chr3R 13525290 13525301 6 124 29.5 13.0 21.2 0.3 138 chr3R 13525163 intergenic not near genes chr3R 13525232 intergenic not near genes chr3R 13525301 intergenic not near genes chr3R_6_13525001 chr3R_13525001 RAL-307_100b 3197 chr3R 13525185 13525216 chr3R 13525281 13525283 22 112 10.0 8.0 9.0 2.2 98 chr3R 13525185 intergenic not near genes chr3R 13525234 intergenic not near genes chr3R 13525283 intergenic not near genes chr3R_22_13525001 chr3R_13525001 RAL-307_100b 3198 chr3R 13580818 13580830 chr3R 13580920 13580932 9 101 34.0 49.5 41.8 0.2 114 chr3R 13580818 intergenic not near genes chr3R 13580875 intergenic not near genes chr3R 13580932 intergenic not near genes chr3R_9_13580001 chr3R_13580001 RAL-307_100b 3199 chr3R 13599193 13599239 chr3R 13599328 13599375 22 136 7.5 10.0 8.8 2.2 182 chr3R 13599193 intergenic not near genes chr3R 13599284 intergenic not near genes chr3R 13599375 intergenic not near genes chr3R_22_13595001 chr3R_13595001 RAL-307_100b 3200 chr3R 13603029 13603076 chr3R 13603145 13603190 39 115 20.0 12.0 16.0 2.3 161 chr3R 13603029 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603190 intergenic not near genes chr3R_39_13600001 chr3R_13600001 RAL-307_100b 3201 chr3R 13609522 13609575 chr3R 13609648 13609694 11 119 0.0 4.5 2.2 3.4 172 chr3R 13609522 intergenic CG9759 - chr3R 13609608 intergenic CG9759 - chr3R 13609694 intergenic CG9759 - chr3R_11_13605001 chr3R_13605001 RAL-307_100b 3202 chr3R 13625666 13625722 chr3R 13625772 13625822 29 104 13.0 9.5 11.2 2.4 156 chr3R 13625666 intergenic not near genes chr3R 13625744 intergenic not near genes chr3R 13625822 intergenic not near genes chr3R_29_13625001 chr3R_13625001 RAL-307_100b 3203 chr3R 13659719 13659845 chr3R 13659840 13659927 6 105 0.0 0.0 0.0 6.0 208 chr3R 13659719 intron Hrb87F - chr3R 13659823 intron Hrb87F - chr3R 13659927 intron Hrb87F - chr3R_6_13655001 chr3R_13655001 RAL-307_100b 3204 chr3R 13672916 13672920 chr3R 13673019 13673023 5 103 45.5 18.0 31.8 0.2 107 chr3R 13672916 intron Task6 - chr3R 13672970 intron Task6 - chr3R 13673023 intron Task6 - chr3R_5_13670001 chr3R_13670001 RAL-307_100b 3205 chr3R 13672922 13672972 chr3R 13673017 13673075 56 100 16.5 16.5 16.5 3.2 153 chr3R 13672922 intron Task6 - chr3R 13672998 intron Task6 - chr3R 13673075 intron Task6 - chr3R_56_13670001 chr3R_13670001 RAL-307_100b 3206 chr3R 13692760 13692767 chr3R 13692862 13692864 7 102 37.5 26.0 31.8 0.2 104 chr3R 13692760 3` UTR flfl + chr3R 13692812 3` UTR flfl + chr3R 13692864 3` UTR flfl + chr3R_7_13690001 chr3R_13690001 RAL-307_100b 3207 chr3R 13692768 13692820 chr3R 13692861 13692907 58 98 18.0 25.5 21.8 2.5 139 chr3R 13692768 3` UTR flfl + chr3R 13692838 3` UTR flfl + chr3R 13692907 3` UTR flfl + chr3R_58_13690001 chr3R_13690001 RAL-307_100b 3208 chr3R 13693028 13693028 chr3R 21907534 21907536 11 8214507 58.5 73.0 65.8 0.2 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_11_17800001 chr3R_17800001 RAL-307_100b 3209 chr3R 13745410 13745443 chr3R 13745547 13745586 12 140 8.0 7.5 7.8 1.4 176 chr3R 13745410 intron CG34383 + chr3R 13745498 intron CG34383 + chr3R 13745586 intron CG34383 + chr3R_12_13745001 chr3R_13745001 RAL-307_100b 3210 chr3R 13758134 13758172 chr3R 13758239 13758283 8 109 0.0 15.0 7.5 0.9 149 chr3R 13758134 intron CG34383 + chr3R 13758208 intron CG34383 + chr3R 13758283 intron CG34383 + chr3R_8_13755001 chr3R_13755001 RAL-307_100b 3211 chr3R 13782029 13782042 chr3R 13782135 13782148 19 105 39.5 16.5 28.0 0.7 119 chr3R 13782029 exon CG9286 + chr3R 13782088 intergenic CG9286 +,Dip-B + chr3R 13782148 intergenic CG9286 +,Dip-B + chr3R_19_13780001 chr3R_13780001 RAL-307_100b 3212 chr3R 13782043 13782086 chr3R 13782132 13782192 23 103 14.0 16.5 15.2 1.4 149 chr3R 13782043 exon CG9286 + chr3R 13782118 intergenic CG9286 +,Dip-B + chr3R 13782192 intergenic Dip-B +,CG9286 + chr3R_23_13780001 chr3R_13780001 RAL-307_100b 3213 chr3R 13850286 13850342 chr3R 13850406 13850455 21 113 0.0 7.0 3.5 4.7 169 chr3R 13850286 intergenic not near genes chr3R 13850370 intergenic not near genes chr3R 13850455 intergenic not near genes chr3R_21_13850001 chr3R_13850001 RAL-307_100b 3214 chr3R 13863656 13863715 chr3R 13863769 13863795 44 106 15.5 20.5 18.0 2.3 139 chr3R 13863656 intergenic not near genes chr3R 13863726 intergenic not near genes chr3R 13863795 intergenic not near genes chr3R_44_13860001 chr3R_13860001 RAL-307_100b 3215 chr3R 13909893 13909908 chr3R 13909997 13910012 15 103 14.5 18.0 16.2 0.9 119 chr3R 13909893 intergenic not near genes chr3R 13909952 intergenic not near genes chr3R 13910012 intergenic not near genes chr3R_15_13905001 chr3R_13905001 RAL-307_100b 3216 chr3R 13948205 13948257 chr3R 13948308 13948360 39 102 8.5 15.0 11.8 3.0 155 chr3R 13948205 intergenic CG31517 + chr3R 13948282 intergenic CG31517 + chr3R 13948360 intergenic CG31517 + chr3R_39_13945001 chr3R_13945001 RAL-307_100b 3217 chr3R 13974492 13974536 chr3R 13974594 13974607 8 96 2.0 17.0 9.5 0.8 115 chr3R 13974492 intron,5` UTR rdx -,CR43460 + chr3R 13974550 intron,5` UTR rdx -,CR43460 + chr3R 13974607 intron,5` UTR rdx -,CR43460 + chr3R_8_13970001 chr3R_13970001 RAL-307_100b 3218 chr3R 13975349 13975406 chr3R 13975454 13975511 59 104 12.5 14.5 13.5 4.1 162 chr3R 13975349 intron rdx - chr3R 13975430 intron rdx - chr3R 13975511 intron rdx - chr3R_59_13975001 chr3R_13975001 RAL-307_100b 3219 chr3R 13984359 13984367 chr3R 13984536 13984539 5 176 32.0 18.0 25.0 0.2 180 chr3R 13984359 intron rdx - chr3R 13984449 intron rdx - chr3R 13984539 intron rdx - chr3R_5_13980001 chr3R_13980001 RAL-307_100b 3220 chr3R 13984371 13984410 chr3R 13984533 13984584 46 174 11.5 16.0 13.8 3.1 213 chr3R 13984371 intron rdx - chr3R 13984478 intron rdx - chr3R 13984584 intron rdx - chr3R_46_13980001 chr3R_13980001 RAL-307_100b 3221 chr3R 13994278 13994332 chr3R 13994558 13994612 46 280 13.0 5.5 9.2 4.5 334 chr3R 13994278 intron rdx - chr3R 13994445 intron rdx - chr3R 13994612 intron rdx - chr3R_46_13990001 chr3R_13990001 RAL-307_100b 3222 chr3R 14037558 14037589 chr3R 14037664 14037695 33 102 19.5 10.5 15.0 2.1 137 chr3R 14037558 intergenic not near genes chr3R 14037626 intergenic not near genes chr3R 14037695 intergenic not near genes chr3R_33_14035001 chr3R_14035001 RAL-307_100b 3223 chr3R 14066662 14066719 chr3R 14066811 14066848 20 139 6.5 5.0 5.8 2.9 186 chr3R 14066662 exon foxo + chr3R 14066755 exon foxo + chr3R 14066848 exon foxo + chr3R_20_14065001 chr3R_14065001 RAL-307_100b 3224 chr3R 14070103 14070146 chr3R 14070209 14070243 55 104 16.0 21.0 18.5 2.8 140 chr3R 14070103 intron foxo + chr3R 14070173 intron foxo + chr3R 14070243 intron foxo + chr3R_55_14070001 chr3R_14070001 RAL-307_100b 3225 chr3R 14079798 14079833 chr3R 14079905 14079940 14 105 8.0 4.5 6.2 1.9 142 chr3R 14079798 intron foxo + chr3R 14079869 intron foxo + chr3R 14079940 intron foxo + chr3R_14_14075001 chr3R_14075001 RAL-307_100b 3226 chr3R 14083387 14083433 chr3R 14083513 14083543 32 124 17.0 1.0 9.0 3.2 156 chr3R 14083387 intron foxo + chr3R 14083465 intron foxo + chr3R 14083543 intron foxo + chr3R_32_14080001 chr3R_14080001 RAL-307_100b 3227 chr3R 14091483 14091535 chr3R 14091587 14091639 32 103 8.5 8.0 8.2 3.5 156 chr3R 14091483 intron Npc2b + chr3R 14091561 intron Npc2b + chr3R 14091639 intron Npc2b + chr3R_32_14090001 chr3R_14090001 RAL-307_100b 3228 chr3R 14109059 14109112 chr3R 14109165 14109218 43 105 9.5 13.0 11.2 3.5 159 chr3R 14109059 intergenic CR44237 -,Or88a + chr3R 14109138 intergenic CR44237 -,Or88a + chr3R 14109218 intergenic CR44237 -,Or88a + chr3R_43_14105001 chr3R_14105001 RAL-307_100b 3229 chr3R 14117419 14117442 chr3R 14117520 14117542 24 98 19.0 16.0 17.5 1.3 123 chr3R 14117419 intron Kif19A - chr3R 14117480 intron Kif19A - chr3R 14117542 intron Kif19A - chr3R_24_14115001 chr3R_14115001 RAL-307_100b 3230 chr3R 14117443 14117467 chr3R 14117517 14117568 23 97 15.5 16.0 15.8 1.4 125 chr3R 14117443 intron Kif19A - chr3R 14117506 intron Kif19A - chr3R 14117568 intron Kif19A - chr3R_23_14115001 chr3R_14115001 RAL-307_100b 3231 chr3R 14168439 14168471 chr3R 14168552 14168584 23 109 0.5 24.5 12.5 1.7 145 chr3R 14168439 3` UTR Dop1R1 - chr3R 14168512 3` UTR Dop1R1 - chr3R 14168584 3` UTR Dop1R1 - chr3R_23_14165001 chr3R_14165001 RAL-307_100b 3232 chr3R 14170126 14170176 chr3R 14170241 14170291 42 113 6.5 11.0 8.8 4.3 165 chr3R 14170126 3` UTR Dop1R1 - chr3R 14170208 3` UTR Dop1R1 - chr3R 14170291 3` UTR Dop1R1 - chr3R_42_14170001 chr3R_14170001 RAL-307_100b 3233 chr3R 14180788 14180835 chr3R 14185578 14185625 F-element 49 4789 13.0 17.5 15.2 3.0 4837 chr3R 14180788 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185625 intron Dop1R1 - chr3R_49_14180001 chr3R_14180001 RAL-307_100b 3234 chr3R 14193709 14193718 chr3R 14193812 14193821 9 102 16.5 12.0 14.2 0.6 112 chr3R 14193709 intron Dop1R1 - chr3R 14193765 intron Dop1R1 - chr3R 14193821 intron Dop1R1 - chr3R_9_14190001 chr3R_14190001 RAL-307_100b 3235 chr3R 14193719 14193761 chr3R 14193807 14193863 48 99 10.0 9.0 9.5 4.6 144 chr3R 14193719 intron Dop1R1 - chr3R 14193791 intron Dop1R1 - chr3R 14193863 intron Dop1R1 - chr3R_48_14190001 chr3R_14190001 RAL-307_100b 3236 chr3R 14194456 14194460 chr3R 14203610 14203614 roo 6 9154 16.0 1.0 8.5 0.6 9158 chr3R 14194456 intron Dop1R1 - chr3R 14199035 intron Dop1R1 - chr3R 14203614 intron Dop1R1 - chr3R_6_14195001 chr3R_14195001 RAL-307_100b 3237 chr3R 14246371 14246381 chr3R 14247890 14247902 jockey 11 1519 32.5 14.0 23.2 0.5 1531 chr3R 14246371 intergenic not near genes chr3R 14247136 intergenic not near genes chr3R 14247902 intergenic not near genes chr3R_11_14245001 chr3R_14245001 RAL-307_100b 3238 chr3R 14246382 14246411 chr3R 14247887 14247912 jockey 40 1510 17.0 13.0 15.0 2.5 1530 chr3R 14246382 intergenic not near genes chr3R 14247147 intergenic not near genes chr3R 14247912 intergenic not near genes chr3R_40_14245001 chr3R_14245001 RAL-307_100b 3239 chr3R 14246413 14246418 chr3R 14247883 14247932 jockey 5 1486 14.5 10.5 12.5 0.4 1519 chr3R 14246413 intergenic not near genes chr3R 14247172 intergenic not near genes chr3R 14247932 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-307_100b 3240 chr3R 14248705 14248736 chr3R 14248808 14248839 16 100 11.5 0.0 5.8 2.4 134 chr3R 14248705 intergenic not near genes chr3R 14248772 intergenic not near genes chr3R 14248839 intergenic not near genes chr3R_16_14245001 chr3R_14245001 RAL-307_100b 3241 chr3R 14386196 14386237 chr3R 14386299 14386346 16 107 0.0 13.0 6.5 2.1 150 chr3R 14386196 intergenic not near genes chr3R 14386271 intergenic not near genes chr3R 14386346 intergenic not near genes chr3R_16_14385001 chr3R_14385001 RAL-307_100b 3242 chr3R 14440696 14440754 chr3R 14440797 14440855 47 100 10.0 10.5 10.2 4.2 159 chr3R 14440696 intron cv-c - chr3R 14440776 intron cv-c - chr3R 14440855 intron cv-c - chr3R_47_14440001 chr3R_14440001 RAL-307_100b 3243 chr3R 14489264 14489274 chr3R 14489638 14489654 13 379 16.0 21.0 18.5 0.7 390 chr3R 14489264 intergenic not near genes chr3R 14489459 intergenic not near genes chr3R 14489654 intergenic not near genes chr3R_13_14485001 chr3R_14485001 RAL-307_100b 3244 chr3R 14489275 14489293 chr3R 14489635 14489673 25 375 8.5 19.5 14.0 1.7 398 chr3R 14489275 intergenic not near genes chr3R 14489474 intergenic not near genes chr3R 14489673 intergenic not near genes chr3R_25_14485001 chr3R_14485001 RAL-307_100b 3245 chr3R 14534702 14534759 chr3R 14534809 14534866 47 104 7.5 10.5 9.0 4.7 164 chr3R 14534702 intron Pde6 - chr3R 14534784 intron Pde6 - chr3R 14534866 intron Pde6 - chr3R_47_14530001 chr3R_14530001 RAL-307_100b 3246 chr3R 14546032 14546073 chr3R 14546123 14546175 30 101 14.0 0.0 7.0 3.8 143 chr3R 14546032 intron Pde6 - chr3R 14546104 intron Pde6 - chr3R 14546175 intron Pde6 - chr3R_30_14545001 chr3R_14545001 RAL-307_100b 3247 chr3R 14608446 14608477 chr3R 14608563 14608582 30 116 5.5 18.0 11.8 2.3 136 chr3R 14608446 intergenic stumps + chr3R 14608514 intergenic stumps + chr3R 14608582 intergenic not near genes chr3R_30_14605001 chr3R_14605001 RAL-307_100b 3248 chr3R 14664852 14664907 chr3R 14664954 14665009 50 101 13.5 18.5 16.0 2.9 157 chr3R 14664852 intergenic BigH1 +,Meltrin - chr3R 14664930 3` UTR Meltrin - chr3R 14665009 3` UTR Meltrin - chr3R_50_14660001 chr3R_14660001 RAL-307_100b 3249 chr3R 14685760 14685816 chr3R 14685866 14685920 46 105 8.5 12.5 10.5 4.0 160 chr3R 14685760 intron Meltrin - chr3R 14685840 intron Meltrin - chr3R 14685920 intron Meltrin - chr3R_46_14685001 chr3R_14685001 RAL-307_100b 3250 chr3R 14694431 14694489 chr3R 14694536 14694594 47 100 16.0 17.5 16.8 2.6 163 chr3R 14694431 intron Meltrin - chr3R 14694512 intron Meltrin - chr3R 14694594 intron Meltrin - chr3R_47_14690001 chr3R_14690001 RAL-307_100b 3251 chr3R 14704364 14704366 chr3R 14704466 14704468 4 102 28.5 14.5 21.5 0.2 104 chr3R 14704364 intron kibra - chr3R 14704416 intron kibra - chr3R 14704468 intron kibra - chr3R_4_14700001 chr3R_14700001 RAL-307_100b 3252 chr3R 14704371 14704384 chr3R 14704463 14704486 11 101 22.5 15.5 19.0 0.6 115 chr3R 14704371 intron kibra - chr3R 14704428 intron kibra - chr3R 14704486 intron kibra - chr3R_11_14700001 chr3R_14700001 RAL-307_100b 3253 chr3R 14704385 14704418 chr3R 14704462 14704509 24 97 16.0 17.0 16.5 1.4 124 chr3R 14704385 intron kibra - chr3R 14704447 intron kibra - chr3R 14704509 intron kibra - chr3R_24_14700001 chr3R_14700001 RAL-307_100b 3254 chr3R 14764563 14764591 chr3R 14764670 14764701 6 109 13.0 7.5 10.2 0.5 138 chr3R 14764563 intron jvl + chr3R 14764632 intron jvl + chr3R 14764701 intron jvl + chr3R_6_14760001 chr3R_14760001 RAL-307_100b 3255 chr3R 14787109 14787141 chr3R 14787548 14787569 34 436 22.0 13.5 17.8 1.8 460 chr3R 14787109 intron jvl + chr3R 14787339 intron jvl + chr3R 14787569 intron jvl + chr3R_34_14785001 chr3R_14785001 RAL-307_100b 3256 chr3R 14869837 14869895 chr3R 14869953 14870011 58 113 18.0 16.5 17.2 3.2 174 chr3R 14869837 intron btsz - chr3R 14869924 intron btsz - chr3R 14870011 intron btsz - chr3R_58_14865001 chr3R_14865001 RAL-307_100b 3257 chr3R 14898449 14898504 chr3R 14898594 14898628 44 144 11.5 13.5 12.5 3.3 179 chr3R 14898449 intergenic Nup93-2 -,CG3817 + chr3R 14898538 intergenic Nup93-2 -,CG3817 + chr3R 14898628 intergenic CG3817 +,Nup93-2 - chr3R_44_14895001 chr3R_14895001 RAL-307_100b 3258 chr3R 14944881 14944895 chr3R 14944983 14944997 8 101 23.5 22.5 23.0 0.3 116 chr3R 14944881 intergenic not near genes chr3R 14944939 intergenic not near genes chr3R 14944997 intergenic not near genes chr3R_8_14940001 chr3R_14940001 RAL-307_100b 3259 chr3R 14959000 14959038 chr3R 14959209 14959237 19 205 18.5 11.5 15.0 1.2 237 chr3R 14959000 intergenic not near genes chr3R 14959118 intergenic not near genes chr3R 14959237 intergenic not near genes chr3R_19_14955001 chr3R_14955001 RAL-307_100b 3260 chr3R 14975327 14975329 chr3R 18456450 18456453 5 3481124 58.5 40.5 49.5 0.1 3481126 chr3R 14975327 intergenic not near genes chr3R 16715890 intron Ubx - chr3R 18456453 intron fru - chr3R_5_16715001 chr3R_16715001 RAL-307_100b 3261 chr3R 15009370 15009372 chr3R 15009480 15009484 6 111 34.0 57.0 45.5 0.1 114 chr3R 15009370 intergenic not near genes chr3R 15009427 intergenic not near genes chr3R 15009484 intergenic not near genes chr3R_6_15005001 chr3R_15005001 RAL-307_100b 3262 chr3R 15009373 15009377 chr3R 15009448 15009489 5 103 32.0 26.5 29.2 0.2 116 chr3R 15009373 intergenic not near genes chr3R 15009431 intergenic not near genes chr3R 15009489 intergenic not near genes chr3R_5_15005001 chr3R_15005001 RAL-307_100b 3263 chr3R 15009378 15009380 chr3R 15009441 15009492 5 98 31.0 22.0 26.5 0.2 114 chr3R 15009378 intergenic not near genes chr3R 15009435 intergenic not near genes chr3R 15009492 intergenic not near genes chr3R_5_15005001 chr3R_15005001 RAL-307_100b 3264 chr3R 15041403 15041451 chr3R 15045196 15045244 Doc 38 3791 8.5 11.5 10.0 3.5 3841 chr3R 15041403 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045244 intergenic not near genes chr3R_38_15040001 chr3R_15040001 RAL-307_100b 3265 chr3R 15058194 15058247 chr3R 15058304 15058357 44 108 15.0 11.5 13.2 3.1 163 chr3R 15058194 intron dpr9 - chr3R 15058276 intron dpr9 - chr3R 15058357 intron dpr9 - chr3R_44_15055001 chr3R_15055001 RAL-307_100b 3266 chr3R 15059255 15059476 chr3R 15059474 15059588 BS 28 200 0.0 0.0 0.0 28.0 333 chr3R 15059255 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059588 intron dpr9 - chr3R_28_15055001 chr3R_15055001 RAL-307_100b 3267 chr3R 15061011 15061035 chr3R 15061117 15061141 16 106 18.5 13.0 15.8 1.0 130 chr3R 15061011 intron dpr9 - chr3R 15061076 intron dpr9 - chr3R 15061141 intron dpr9 - chr3R_16_15060001 chr3R_15060001 RAL-307_100b 3268 chr3R 15079781 15079839 chr3R 15080047 15080090 pogo 47 263 14.5 11.0 12.8 3.4 309 chr3R 15079781 3` UTR CG6966 - chr3R 15079936 3` UTR CG6966 - chr3R 15080090 3` UTR CG6966 - chr3R_47_15075001 chr3R_15075001 RAL-307_100b 3269 chr3R 15088070 15088104 chr3R 15088193 15088227 12 119 9.5 14.5 12.0 0.9 157 chr3R 15088070 intron CG6966 - chr3R 15088148 intron CG6966 - chr3R 15088227 intron CG6966 - chr3R_12_15085001 chr3R_15085001 RAL-307_100b 3270 chr3R 15102469 15102526 chr3R 15109751 15109806 412 45 7279 10.5 12.0 11.2 3.7 7337 chr3R 15102469 intron CG42788 - chr3R 15106138 intron CG42788 - chr3R 15109806 intron CG42788 - chr3R_45_15105001 chr3R_15105001 RAL-307_100b 3271 chr3R 15114889 15114929 chr3R 15114990 15115030 24 100 14.0 10.0 12.0 1.8 141 chr3R 15114889 intron CG42788 - chr3R 15114960 intron CG42788 - chr3R 15115030 intron CG42788 - chr3R_24_15110001 chr3R_15110001 RAL-307_100b 3272 chr3R 15132041 15132043 chr3R 15135126 15135128 Juan 5 3085 78.0 47.0 62.5 0.1 3087 chr3R 15132041 intergenic CG42788 - chr3R 15133584 intergenic not near genes chr3R 15135128 intergenic CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-307_100b 3273 chr3R 15132044 15132072 chr3R 15135125 15135125 Juan 52 3083 47.5 46.5 47.0 1.1 3081 chr3R 15132044 intergenic CG42788 - chr3R 15133584 intergenic not near genes chr3R 15135125 intergenic CG6912 - chr3R_52_15130001 chr3R_15130001 RAL-307_100b 3274 chr3R 15132073 15132077 chr3R 15135114 15135147 Juan 6 3075 43.0 36.5 39.8 0.1 3074 chr3R 15132073 intergenic CG42788 - chr3R 15133610 intergenic not near genes chr3R 15135147 3` UTR CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-307_100b 3275 chr3R 15130866 15130909 chr3R 15141202 15141245 19 10338 100.0 127.0 113.5 0.2 10379 chr3R 15130866 intron CG42788 - chr3R 15136056 exon CG6912 - chr3R 15141245 exon CG3987 + chr3R_19_15135001 chr3R_15135001 RAL-307_100b 3276 chr3R 15162519 15162533 chr3R 15167312 15167326 F-element 11 4793 37.0 12.0 24.5 0.4 4807 chr3R 15162519 intron Gyc88E + chr3R 15164922 intron Gyc88E + chr3R 15167326 intron Gyc88E + chr3R_11_15160001 chr3R_15160001 RAL-307_100b 3277 chr3R 15162534 15162562 chr3R 15167311 15167341 F-element 19 4789 20.5 11.5 16.0 1.1 4807 chr3R 15162534 intron Gyc88E + chr3R 15164938 intron Gyc88E + chr3R 15167341 intron Gyc88E + chr3R_19_15160001 chr3R_15160001 RAL-307_100b 3278 chr3R 15190626 15190679 chr3R 15190776 15190822 42 149 7.5 16.0 11.8 3.3 196 chr3R 15190626 3` UTR Gyc88E + chr3R 15190724 3` UTR Gyc88E + chr3R 15190822 3` UTR Gyc88E + chr3R_42_15190001 chr3R_15190001 RAL-307_100b 3279 chr3R 15445885 15445905 chr3R 15445995 15446015 23 109 18.0 4.0 11.0 1.9 130 chr3R 15445885 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446015 intron AdamTS-A - chr3R_23_15445001 chr3R_15445001 RAL-307_100b 3280 chr3R 15566391 15566445 chr3R 15566500 15566554 48 106 12.0 12.5 12.2 3.6 163 chr3R 15566391 intergenic not near genes chr3R 15566472 intergenic not near genes chr3R 15566554 intergenic not near genes chr3R_48_15565001 chr3R_15565001 RAL-307_100b 3281 chr3R 15594654 15594659 chr3R 15594762 15594762 4 106 0.0 22.5 11.2 0.3 108 chr3R 15594654 intergenic not near genes chr3R 15594708 intergenic not near genes chr3R 15594762 intergenic not near genes chr3R_4_15590001 chr3R_15590001 RAL-307_100b 3282 chr3R 15594664 15594667 chr3R 15594755 15594775 5 105 0.0 19.5 9.8 0.5 111 chr3R 15594664 intergenic not near genes chr3R 15594720 intergenic not near genes chr3R 15594775 intergenic not near genes chr3R_5_15590001 chr3R_15590001 RAL-307_100b 3283 chr3R 15594668 15594676 chr3R 15594748 15594784 8 103 0.0 17.0 8.5 0.8 116 chr3R 15594668 intergenic not near genes chr3R 15594726 intergenic not near genes chr3R 15594784 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RAL-307_100b 3284 chr3R 15601145 15601194 chr3R 15608692 15608731 412 61 7543 20.0 18.5 19.2 3.0 7586 chr3R 15601145 intergenic not near genes chr3R 15604938 intergenic not near genes chr3R 15608731 intergenic not near genes chr3R_61_15600001 chr3R_15600001 RAL-307_100b 3285 chr3R 15608766 15608771 chr3R 15609020 15609025 8 254 44.0 19.5 31.8 0.2 259 chr3R 15608766 intergenic not near genes chr3R 15608896 intergenic not near genes chr3R 15609025 intergenic not near genes chr3R_8_15605001 chr3R_15605001 RAL-307_100b 3286 chr3R 15608772 15608820 chr3R 15609016 15609069 53 249 16.5 17.0 16.8 3.0 297 chr3R 15608772 intergenic not near genes chr3R 15608920 intergenic not near genes chr3R 15609069 intergenic not near genes chr3R_53_15605001 chr3R_15605001 RAL-307_100b 3287 chr3R 15618733 15618764 chr3R 15626227 15626263 blood 19 7497 7.5 22.5 15.0 1.2 7530 chr3R 15618733 intergenic not near genes chr3R 15622498 intergenic not near genes chr3R 15626263 intergenic not near genes chr3R_19_15620001 chr3R_15620001 RAL-307_100b 3288 chr3R 15667987 15668027 chr3R 15668101 15668115 30 111 19.0 10.5 14.8 1.9 128 chr3R 15667987 intron,5` UTR pxb +,CR43849 + chr3R 15668051 intron,5` UTR pxb +,CR43849 + chr3R 15668115 intron,5` UTR pxb +,CR43849 + chr3R_30_15665001 chr3R_15665001 RAL-307_100b 3289 chr3R 15676530 15676581 chr3R 15676634 15676685 57 100 10.5 16.0 13.2 4.0 155 chr3R 15676530 intron pxb + chr3R 15676608 intron pxb + chr3R 15676685 intron pxb + chr3R_57_15675001 chr3R_15675001 RAL-307_100b 3290 chr3R 15702871 15702890 chr3R 15703074 15703104 17 211 0.0 23.5 11.8 1.3 233 chr3R 15702871 intergenic not near genes chr3R 15702988 intergenic not near genes chr3R 15703104 intergenic not near genes chr3R_17_15700001 chr3R_15700001 RAL-307_100b 3291 chr3R 15715779 15715836 chr3R 15715889 15715946 47 109 8.0 12.0 10.0 4.3 167 chr3R 15715779 exon CG31294 - chr3R 15715862 intron CG31294 - chr3R 15715946 exon CG31294 - chr3R_47_15715001 chr3R_15715001 RAL-307_100b 3292 chr3R 15734160 15734176 chr3R 15734261 15734292 8 112 32.0 12.0 22.0 0.3 132 chr3R 15734160 intergenic not near genes chr3R 15734226 intergenic not near genes chr3R 15734292 intergenic not near genes chr3R_8_15730001 chr3R_15730001 RAL-307_100b 3293 chr3R 15734177 15734211 chr3R 15734260 15734287 21 102 15.5 12.0 13.8 1.4 110 chr3R 15734177 intergenic not near genes chr3R 15734232 intergenic not near genes chr3R 15734287 intergenic not near genes chr3R_21_15730001 chr3R_15730001 RAL-307_100b 3294 chr3R 15735220 15735235 chr3R 15739965 15739980 F-element 15 4745 11.0 11.5 11.2 1.2 4760 chr3R 15735220 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739980 intergenic not near genes chr3R_15_15735001 chr3R_15735001 RAL-307_100b 3295 chr3R 15743844 15743901 chr3R 15743981 15744038 66 134 12.5 13.5 13.0 4.7 194 chr3R 15743844 intergenic not near genes chr3R 15743941 intergenic not near genes chr3R 15744038 intergenic not near genes chr3R_66_15740001 chr3R_15740001 RAL-307_100b 3296 chr3R 15811475 15811535 chr3R 15811741 15811776 71 261 18.0 19.5 18.8 3.6 301 chr3R 15811475 intron alpha-Man-IIb + chr3R 15811626 intron alpha-Man-IIb + chr3R 15811776 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_71_15810001 chr3R_15810001 RAL-307_100b 3297 chr3R 15891642 15891646 chr3R 15892059 15892063 4 416 29.5 18.0 23.8 0.2 421 chr3R 15891642 intron CG14877 - chr3R 15891852 intron CG14877 - chr3R 15892063 intron CG14877 - chr3R_4_15890001 chr3R_15890001 RAL-307_100b 3298 chr3R 15891648 15891663 chr3R 15892057 15892080 14 416 23.0 16.5 19.8 0.7 432 chr3R 15891648 intron CG14877 - chr3R 15891864 intron CG14877 - chr3R 15892080 intron CG14877 - chr3R_14_15890001 chr3R_15890001 RAL-307_100b 3299 chr3R 15891664 15891687 chr3R 15892055 15892091 18 409 13.0 15.5 14.2 1.2 427 chr3R 15891664 intron CG14877 - chr3R 15891878 intron CG14877 - chr3R 15892091 intron CG14877 - chr3R_18_15890001 chr3R_15890001 RAL-307_100b 3300 chr3R 15892630 15892688 chr3R 15892736 15892782 50 103 15.5 15.5 15.5 3.0 152 chr3R 15892630 intron CG14877 - chr3R 15892706 intron CG14877 - chr3R 15892782 intron CG14877 - chr3R_50_15890001 chr3R_15890001 RAL-307_100b 3301 chr3R 16023846 16023850 chr3R 16023948 16023952 5 102 35.0 17.5 26.2 0.2 106 chr3R 16023846 intergenic not near genes chr3R 16023899 intergenic not near genes chr3R 16023952 intergenic not near genes chr3R_5_16020001 chr3R_16020001 RAL-307_100b 3302 chr3R 16023851 16023890 chr3R 16023942 16023992 38 97 10.5 16.5 13.5 2.6 141 chr3R 16023851 intergenic not near genes chr3R 16023922 intergenic not near genes chr3R 16023992 intergenic not near genes chr3R_38_16020001 chr3R_16020001 RAL-307_100b 3303 chr3R 16033400 16033431 chr3R 16033506 16033523 24 104 9.5 8.0 8.8 2.4 123 chr3R 16033400 intron pnr + chr3R 16033462 intron pnr + chr3R 16033523 intron pnr + chr3R_24_16030001 chr3R_16030001 RAL-307_100b 3304 chr3R 16195529 16195581 chr3R 16195775 16195822 39 242 14.5 15.0 14.8 2.5 293 chr3R 16195529 intron sra + chr3R 16195676 intron sra + chr3R 16195822 intron sra + chr3R_39_16195001 chr3R_16195001 RAL-307_100b 3305 chr3R 16246522 16246554 chr3R 16246611 16246655 18 97 4.0 19.0 11.5 1.4 133 chr3R 16246522 intron tara + chr3R 16246588 intron tara + chr3R 16246655 intron tara + chr3R_18_16245001 chr3R_16245001 RAL-307_100b 3306 chr3R 16374275 16374331 chr3R 16374417 16374473 33 139 6.0 13.5 9.8 3.1 198 chr3R 16374275 intergenic ss - chr3R 16374374 intergenic ss - chr3R 16374473 3` UTR ss - chr3R_33_16370001 chr3R_16370001 RAL-307_100b 3307 chr3R 16472564 16472579 chr3R 16472662 16472679 17 99 33.5 25.0 29.2 0.6 115 chr3R 16472564 intergenic Gyc-89Da + chr3R 16472622 5` UTR Gyc-89Da + chr3R 16472679 5` UTR Gyc-89Da + chr3R_17_16470001 chr3R_16470001 RAL-307_100b 3308 chr3R 16472582 16472594 chr3R 16472660 16472685 17 92 28.0 24.0 26.0 0.6 103 chr3R 16472582 intergenic Gyc-89Da + chr3R 16472634 5` UTR Gyc-89Da + chr3R 16472685 5` UTR Gyc-89Da + chr3R_17_16470001 chr3R_16470001 RAL-307_100b 3309 chr3R 16472596 16472601 chr3R 16472654 16472659 5 68 26.0 24.0 25.0 0.2 63 chr3R 16472596 intergenic Gyc-89Da + chr3R 16472628 5` UTR Gyc-89Da + chr3R 16472659 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 RAL-307_100b 3310 chr3R 16519909 16519919 chr3R 16520027 16520037 6 117 40.5 14.0 27.2 0.2 128 chr3R 16519909 intron CG42342 + chr3R 16519973 intron CG42342 + chr3R 16520037 intron CG42342 + chr3R_6_16515001 chr3R_16515001 RAL-307_100b 3311 chr3R 16519920 16519931 chr3R 16520023 16520049 13 115 34.0 12.5 23.2 0.5 129 chr3R 16519920 intron CG42342 + chr3R 16519984 intron CG42342 + chr3R 16520049 intron CG42342 + chr3R_13_16515001 chr3R_16515001 RAL-307_100b 3312 chr3R 16520575 16520621 chr3R 16520663 16520725 46 99 16.5 15.5 16.0 2.7 150 chr3R 16520575 intron CG42342 + chr3R 16520650 intron CG42342 + chr3R 16520725 intron CG42342 + chr3R_46_16520001 chr3R_16520001 RAL-307_100b 3313 chr3R 16534428 16534442 chr3R 16534541 16534555 7 113 24.0 8.5 16.2 0.4 127 chr3R 16534428 intron CG42342 + chr3R 16534492 intron CG42342 + chr3R 16534555 intron CG42342 + chr3R_7_16530001 chr3R_16530001 RAL-307_100b 3314 chr3R 16534443 16534449 chr3R 16534540 16534562 7 109 22.5 8.5 15.5 0.4 119 chr3R 16534443 intron CG42342 + chr3R 16534502 intron CG42342 + chr3R 16534562 intron CG42342 + chr3R_7_16530001 chr3R_16530001 RAL-307_100b 3315 chr3R 16563680 16563686 chr3R 16563784 16563790 12 104 34.0 35.5 34.8 0.3 110 chr3R 16563680 intron CG42342 + chr3R 16563735 intron CG42342 + chr3R 16563790 intron CG42342 + chr3R_12_16560001 chr3R_16560001 RAL-307_100b 3316 chr3R 16563687 16563702 chr3R 16563776 16563806 19 102 24.0 28.5 26.2 0.7 119 chr3R 16563687 intron CG42342 + chr3R 16563746 intron CG42342 + chr3R 16563806 intron CG42342 + chr3R_19_16560001 chr3R_16560001 RAL-307_100b 3317 chr3R 16563703 16563706 chr3R 16563765 16563810 5 96 21.5 22.0 21.8 0.2 107 chr3R 16563703 intron CG42342 + chr3R 16563756 intron CG42342 + chr3R 16563810 intron CG42342 + chr3R_5_16560001 chr3R_16560001 RAL-307_100b 3318 chr3R 16582882 16582919 chr3R 16582986 16583023 28 103 24.0 29.0 26.5 1.0 141 chr3R 16582882 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583023 intron Scp2 - chr3R_28_16580001 chr3R_16580001 RAL-307_100b 3319 chr3R 16633669 16633685 chr3R 16633794 16633803 14 123 35.5 40.5 38.0 0.4 134 chr3R 16633669 intron Fas1 + chr3R 16633736 intron Fas1 + chr3R 16633803 intron Fas1 + chr3R_14_16630001 chr3R_16630001 RAL-307_100b 3320 chr3R 16731911 16731921 chr3R 16732012 16732022 5 101 29.0 3.5 16.2 0.3 111 chr3R 16731911 intron Ubx - chr3R 16731966 intron Ubx - chr3R 16732022 intron Ubx - chr3R_5_16730001 chr3R_16730001 RAL-307_100b 3321 chr3R 16734853 16734862 chr3R 16734961 16734970 8 107 18.5 5.5 12.0 0.6 117 chr3R 16734853 intergenic Ubx - chr3R 16734912 intergenic Ubx - chr3R 16734970 intergenic not near genes chr3R_8_16730001 chr3R_16730001 RAL-307_100b 3322 chr3R 16734864 16734895 chr3R 16734958 16735003 17 107 4.0 5.5 4.8 2.9 139 chr3R 16734864 intergenic Ubx - chr3R 16734934 intergenic not near genes chr3R 16735003 intergenic not near genes chr3R_17_16730001 chr3R_16730001 RAL-307_100b 3323 chr3R 16735826 16735880 chr3R 16736012 16736044 51 183 15.5 23.0 19.2 2.5 218 chr3R 16735826 intergenic not near genes chr3R 16735935 intergenic not near genes chr3R 16736044 intergenic not near genes chr3R_51_16735001 chr3R_16735001 RAL-307_100b 3324 chr3R 16756299 16756304 chr3R 16762515 16762520 diver 5 6216 30.0 3.5 16.8 0.3 6221 chr3R 16756299 intron bxd - chr3R 16759410 intron bxd - chr3R 16762520 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-307_100b 3325 chr3R 16756305 16756351 chr3R 16762509 16762567 diver 36 6211 6.5 3.0 4.8 6.2 6262 chr3R 16756305 intron bxd - chr3R 16759436 intron bxd - chr3R 16762567 intron bxd - chr3R_36_16755001 chr3R_16755001 RAL-307_100b 3326 chr3R 16797417 16797443 chr3R 16797552 16797577 21 134 27.0 12.5 19.8 1.0 160 chr3R 16797417 intergenic not near genes chr3R 16797497 intergenic not near genes chr3R 16797577 intergenic not near genes chr3R_21_16795001 chr3R_16795001 RAL-307_100b 3327 chr3R 16797444 16797473 chr3R 16797550 16797608 36 131 11.0 11.5 11.2 3.0 164 chr3R 16797444 intergenic not near genes chr3R 16797526 intergenic not near genes chr3R 16797608 intergenic not near genes chr3R_36_16795001 chr3R_16795001 RAL-307_100b 3328 chr3R 16889934 16889990 chr3R 16890036 16890070 30 99 15.5 15.0 15.2 1.9 136 chr3R 16889934 intron iab-8 - chr3R 16890002 intron iab-8 - chr3R 16890070 intron iab-8 - chr3R_30_16890001 chr3R_16890001 RAL-307_100b 3329 chr3R 17051689 17051746 chr3R 17057533 17057588 41 5844 87.0 115.5 101.2 0.4 5899 chr3R 17051689 intergenic not near genes chr3R 17054638 intron Dad + chr3R 17057588 5` UTR Dad + chr3R_41_17050001 chr3R_17050001 RAL-307_100b 3330 chr3R 17121496 17121554 chr3R 17121716 17121774 57 216 11.5 7.0 9.2 5.6 278 chr3R 17121496 intron cher - chr3R 17121635 intron,exon cher -,CG42779 + chr3R 17121774 intron,exon cher -,CG42779 + chr3R_57_17120001 chr3R_17120001 RAL-307_100b 3331 chr3R 17179970 17180003 chr3R 17180090 17180108 32 118 13.0 22.5 17.8 1.7 138 chr3R 17179970 intron Mur89F - chr3R 17180039 intron Mur89F - chr3R 17180108 intron Mur89F - chr3R_32_17180001 chr3R_17180001 RAL-307_100b 3332 chr3R 17268649 17268701 chr3R 17268795 17268848 44 145 13.5 8.0 10.8 3.7 199 chr3R 17268649 intergenic not near genes chr3R 17268748 intergenic not near genes chr3R 17268848 intergenic not near genes chr3R_44_17265001 chr3R_17265001 RAL-307_100b 3333 chr3R 17290417 17290474 chr3R 17290528 17290585 42 108 10.0 12.5 11.2 3.4 168 chr3R 17290417 intergenic not near genes chr3R 17290501 intergenic not near genes chr3R 17290585 intergenic not near genes chr3R_42_17290001 chr3R_17290001 RAL-307_100b 3334 chr3R 17294643 17294649 chr3R 17295096 17295102 BS 8 453 37.0 0.0 18.5 0.4 459 chr3R 17294643 intergenic not near genes chr3R 17294872 intergenic not near genes chr3R 17295102 intergenic not near genes chr3R_8_17290001 chr3R_17290001 RAL-307_100b 3335 chr3R 17294650 17294704 chr3R 17295093 17295162 BS 20 451 16.0 0.5 8.2 2.2 512 chr3R 17294650 intergenic not near genes chr3R 17294906 intergenic not near genes chr3R 17295162 intergenic not near genes chr3R_20_17290001 chr3R_17290001 RAL-307_100b 3336 chr3R 17346246 17346247 chr3R 21907534 21907536 4 4561288 80.5 73.0 76.8 0.1 4561290 chr3R 17346246 intron beat-IIa - chr3R 19626891 intron CG6231 - chr3R 21907536 intergenic CG6678 + chr3R_4_19625001 chr3R_19625001 RAL-307_100b 3337 chr3R 17346667 17346714 chr3R 17348255 17348299 F-element 42 1587 13.5 24.5 19.0 2.1 1632 chr3R 17346667 intron beat-IIa - chr3R 17347483 intron beat-IIa - chr3R 17348299 intron beat-IIa - chr3R_42_17345001 chr3R_17345001 RAL-307_100b 3338 chr3R 17354806 17354818 chr3R 17354963 17354968 8 155 12.0 14.0 13.0 0.6 162 chr3R 17354806 intron beat-IIa - chr3R 17354887 intron beat-IIa - chr3R 17354968 intron beat-IIa - chr3R_8_17350001 chr3R_17350001 RAL-307_100b 3339 chr3R 17355464 17355523 chr3R 17355567 17355606 52 95 14.0 14.0 14.0 3.5 142 chr3R 17355464 intron beat-IIa - chr3R 17355535 intron beat-IIa - chr3R 17355606 intron beat-IIa - chr3R_52_17355001 chr3R_17355001 RAL-307_100b 3340 chr3R 17359001 17359029 chr3R 17359104 17359132 32 102 34.0 15.5 24.8 1.2 131 chr3R 17359001 intron beat-IIa - chr3R 17359066 intron beat-IIa - chr3R 17359132 intron beat-IIa - chr3R_32_17355001 chr3R_17355001 RAL-307_100b 3341 chr3R 17359030 17359058 chr3R 17359103 17359161 24 99 17.5 15.5 16.5 1.4 131 chr3R 17359030 intron beat-IIa - chr3R 17359096 intron beat-IIa - chr3R 17359161 intron beat-IIa - chr3R_24_17355001 chr3R_17355001 RAL-307_100b 3342 chr3R 17371384 17371433 chr3R 17371479 17371522 25 95 13.0 8.0 10.5 2.2 138 chr3R 17371384 3` UTR CR44256 - chr3R 17371453 3` UTR CR44256 - chr3R 17371522 3` UTR CR44256 - chr3R_25_17370001 chr3R_17370001 RAL-307_100b 3343 chr3R 17394419 17394465 chr3R 17394602 17394654 49 184 16.5 20.5 18.5 2.5 235 chr3R 17394419 intron CREG - chr3R 17394536 5` UTR CREG - chr3R 17394654 intergenic CREG - chr3R_49_17390001 chr3R_17390001 RAL-307_100b 3344 chr3R 17452640 17452698 chr3R 17452741 17452799 29 99 1.0 8.5 4.8 5.0 159 chr3R 17452640 intergenic not near genes chr3R 17452720 intergenic not near genes chr3R 17452799 intergenic not near genes chr3R_29_17450001 chr3R_17450001 RAL-307_100b 3345 chr3R 17461177 17461226 chr3R 17461284 17461333 37 105 10.0 14.0 12.0 2.8 156 chr3R 17461177 intergenic not near genes chr3R 17461255 intergenic not near genes chr3R 17461333 intergenic not near genes chr3R_37_17460001 chr3R_17460001 RAL-307_100b 3346 chr3R 17521574 17521574 chr3R 17521723 17521744 5 158 11.0 16.5 13.8 0.3 170 chr3R 17521574 intergenic not near genes chr3R 17521659 intergenic not near genes chr3R 17521744 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-307_100b 3347 chr3R 17521576 17521590 chr3R 17521716 17521775 33 169 7.0 12.5 9.8 3.1 199 chr3R 17521576 intergenic not near genes chr3R 17521676 intergenic not near genes chr3R 17521775 intergenic not near genes chr3R_33_17520001 chr3R_17520001 RAL-307_100b 3348 chr3R 17522198 17522240 chr3R 17522306 17522322 13 114 15.5 0.5 8.0 1.4 124 chr3R 17522198 intergenic not near genes chr3R 17522260 intergenic not near genes chr3R 17522322 intergenic not near genes chr3R_13_17520001 chr3R_17520001 RAL-307_100b 3349 chr3R 17524922 17524931 chr3R 17524994 17525036 8 99 0.0 13.5 6.8 1.0 114 chr3R 17524922 intergenic not near genes chr3R 17524979 intergenic not near genes chr3R 17525036 intergenic not near genes chr3R_8_17520001 chr3R_17520001 RAL-307_100b 3350 chr3R 17571559 17571609 chr3R 17571665 17571715 36 105 11.5 13.5 12.5 2.7 156 chr3R 17571559 intergenic not near genes chr3R 17571637 intergenic not near genes chr3R 17571715 intergenic not near genes chr3R_36_17570001 chr3R_17570001 RAL-307_100b 3351 chr3R 17587192 17587245 chr3R 17587394 17587453 65 203 12.0 9.5 10.8 5.5 261 chr3R 17587192 intergenic not near genes chr3R 17587322 intergenic not near genes chr3R 17587453 intergenic not near genes chr3R_65_17585001 chr3R_17585001 RAL-307_100b 3352 chr3R 17591267 17591269 chr3R 17591726 17591730 F-element 4 460 46.5 20.0 33.2 0.1 463 chr3R 17591267 intergenic not near genes chr3R 17591498 intergenic not near genes chr3R 17591730 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-307_100b 3353 chr3R 17591274 17591277 chr3R 17591724 17591738 F-element 6 457 40.5 17.5 29.0 0.2 464 chr3R 17591274 intergenic not near genes chr3R 17591506 intergenic not near genes chr3R 17591738 intergenic not near genes chr3R_6_17590001 chr3R_17590001 RAL-307_100b 3354 chr3R 17591280 17591324 chr3R 17591723 17591749 F-element 41 450 14.0 17.0 15.5 2.5 469 chr3R 17591280 intergenic not near genes chr3R 17591514 intergenic not near genes chr3R 17591749 intergenic not near genes chr3R_41_17590001 chr3R_17590001 RAL-307_100b 3355 chr3R 17638328 17638339 chr3R 17638839 17638850 roo 10 511 2.0 19.5 10.8 0.8 522 chr3R 17638328 intron CG43175 + chr3R 17638589 intron CG43175 + chr3R 17638850 intron,intron CG43175 +,CR45222 + chr3R_10_17635001 chr3R_17635001 RAL-307_100b 3356 chr3R 17657633 17657661 chr3R 17657809 17657837 INE-1 13 174 0.0 21.5 10.8 1.1 204 chr3R 17657633 intron CG14322 + chr3R 17657735 intron CG14322 + chr3R 17657837 intron CG14322 + chr3R_13_17655001 chr3R_17655001 RAL-307_100b 3357 chr3R 17701362 17701392 chr3R 17701470 17701484 24 103 32.0 18.0 25.0 0.9 122 chr3R 17701362 intron osa - chr3R 17701423 intron osa - chr3R 17701484 intron osa - chr3R_24_17700001 chr3R_17700001 RAL-307_100b 3358 chr3R 17723287 17723346 chr3R 17723395 17723440 43 107 7.5 14.5 11.0 3.6 153 chr3R 17723287 intergenic Pxt + chr3R 17723364 intergenic Pxt + chr3R 17723440 intergenic Pxt + chr3R_43_17720001 chr3R_17720001 RAL-307_100b 3359 chr3R 17725048 17725082 chr3R 17725167 17725172 20 115 23.0 0.0 11.5 1.6 124 chr3R 17725048 intergenic Atg8b - chr3R 17725110 intergenic Atg8b - chr3R 17725172 intergenic Atg8b - chr3R_20_17725001 chr3R_17725001 RAL-307_100b 3360 chr3R 17763135 17763155 chr3R 17763646 17763651 roo 5 508 51.5 19.0 35.2 0.1 516 chr3R 17763135 5` UTR TyrR - chr3R 17763393 intergenic TyrR - chr3R 17763651 intergenic TyrR - chr3R_5_17760001 chr3R_17760001 RAL-307_100b 3361 chr3R 17773370 17773393 chr3R 17773475 17773498 17 104 12.5 18.0 15.2 1.0 128 chr3R 17773370 intron CG43102 - chr3R 17773434 intron CG43102 - chr3R 17773498 exon CG43102 - chr3R_17_17770001 chr3R_17770001 RAL-307_100b 3362 chr3R 17811171 17811217 chr3R 17811276 17811307 17 97 14.0 0.0 7.0 2.1 136 chr3R 17811171 intergenic CG18012 -,tinc + chr3R 17811239 intergenic CG18012 -,tinc + chr3R 17811307 intergenic CG18012 -,tinc + chr3R_17_17810001 chr3R_17810001 RAL-307_100b 3363 chr3R 17814741 17814798 chr3R 17814851 17814908 50 106 12.5 13.5 13.0 3.6 167 chr3R 17814741 intron tinc + chr3R 17814824 intron tinc + chr3R 17814908 intron tinc + chr3R_50_17810001 chr3R_17810001 RAL-307_100b 3364 chr3R 17823183 17823228 chr3R 17823293 17823318 39 108 16.5 14.5 15.5 2.4 135 chr3R 17823183 intron tinc + chr3R 17823250 intron tinc + chr3R 17823318 intron tinc + chr3R_39_17820001 chr3R_17820001 RAL-307_100b 3365 chr3R 17825891 17825932 chr3R 17825995 17826039 5 105 0.0 10.0 5.0 0.8 148 chr3R 17825891 intron tinc + chr3R 17825965 intron tinc + chr3R 17826039 intron tinc + chr3R_5_17825001 chr3R_17825001 RAL-307_100b 3366 chr3R 17845208 17845216 chr3R 17845268 17845318 12 88 16.0 20.0 18.0 0.6 110 chr3R 17845208 intron tinc + chr3R 17845263 intron tinc + chr3R 17845318 intron tinc + chr3R_12_17845001 chr3R_17845001 RAL-307_100b 3367 chr3R 17881867 17881896 chr3R 17881981 17881984 13 109 20.0 0.0 10.0 1.2 117 chr3R 17881867 exon Rim - chr3R 17881926 intron Rim - chr3R 17881984 intron Rim - chr3R_13_17880001 chr3R_17880001 RAL-307_100b 3368 chr3R 17898348 17898360 chr3R 17898455 17898463 9 105 20.0 43.5 31.8 0.3 115 chr3R 17898348 intron Rim - chr3R 17898406 intron Rim - chr3R 17898463 intron Rim - chr3R_9_17895001 chr3R_17895001 RAL-307_100b 3369 chr3R 17899071 17899099 chr3R 17899169 17899187 12 101 17.5 12.5 15.0 0.8 116 chr3R 17899071 intron Rim - chr3R 17899129 intron Rim - chr3R 17899187 intron Rim - chr3R_12_17895001 chr3R_17895001 RAL-307_100b 3370 chr3R 17913098 17913145 chr3R 17913218 17913265 17 119 0.0 13.5 6.8 2.2 167 chr3R 17913098 intron Rim - chr3R 17913182 intron Rim - chr3R 17913265 intron Rim - chr3R_17_17910001 chr3R_17910001 RAL-307_100b 3371 chr3R 17925832 17925862 chr3R 17927324 17927354 hobo 35 1489 27.0 26.5 26.8 1.3 1522 chr3R 17925832 intron cpo + chr3R 17926593 intron cpo + chr3R 17927354 intron cpo + chr3R_35_17925001 chr3R_17925001 RAL-307_100b 3372 chr3R 17925864 17925883 chr3R 17927320 17927361 hobo 17 1484 17.5 25.5 21.5 0.8 1497 chr3R 17925864 intron cpo + chr3R 17926612 intron cpo + chr3R 17927361 intron cpo + chr3R_17_17925001 chr3R_17925001 RAL-307_100b 3373 chr3R 17955820 17955821 chr3R 17955921 17955922 4 101 12.5 4.5 8.5 0.4 102 chr3R 17955820 intron cpo + chr3R 17955871 intron cpo + chr3R 17955922 intron cpo + chr3R_4_17955001 chr3R_17955001 RAL-307_100b 3374 chr3R 17976497 17976533 chr3R 17976599 17976635 31 101 11.0 19.0 15.0 1.9 138 chr3R 17976497 intron cpo + chr3R 17976566 intron cpo + chr3R 17976635 intron cpo + chr3R_31_17975001 chr3R_17975001 RAL-307_100b 3375 chr3R 17993716 17993739 chr3R 17993834 17993863 10 122 24.5 8.0 16.2 0.6 147 chr3R 17993716 intron cpo + chr3R 17993790 intron cpo + chr3R 17993863 intron cpo + chr3R_10_17990001 chr3R_17990001 RAL-307_100b 3376 chr3R 17997130 17997133 chr3R 17997217 17997246 6 103 0.0 26.5 13.2 0.4 116 chr3R 17997130 intron cpo + chr3R 17997188 intron cpo + chr3R 17997246 intron cpo + chr3R_6_17995001 chr3R_17995001 RAL-307_100b 3377 chr3R 17997135 17997138 chr3R 17997202 17997215 6 97 0.0 19.5 9.8 0.6 80 chr3R 17997135 intron cpo + chr3R 17997175 intron cpo + chr3R 17997215 intron cpo + chr3R_6_17995001 chr3R_17995001 RAL-307_100b 3378 chr3R 18003012 18003037 chr3R 18003133 18003158 21 118 30.0 1.0 15.5 1.3 146 chr3R 18003012 intron cpo + chr3R 18003085 intron cpo + chr3R 18003158 intron cpo + chr3R_21_18000001 chr3R_18000001 RAL-307_100b 3379 chr3R 18030454 18030477 chr3R 18030563 18030586 23 108 17.0 14.5 15.8 1.4 132 chr3R 18030454 intergenic not near genes chr3R 18030520 intergenic not near genes chr3R 18030586 intergenic not near genes chr3R_23_18030001 chr3R_18030001 RAL-307_100b 3380 chr3R 4540136 4540168 chr3R 18030717 18030719 4 13490565 29.0 17.5 23.2 0.2 13490583 chr3R 4540136 intron CG34357 - chr3R 11285428 intron CR31386 - chr3R 18030719 intergenic not near genes chr3R_4_11285001 chr3R_11285001 RAL-307_100b 3381 chr3R 18041739 18041773 chr3R 18041840 18041849 15 97 7.5 3.5 5.5 2.3 110 chr3R 18041739 intergenic not near genes chr3R 18041794 intergenic not near genes chr3R 18041849 intergenic not near genes chr3R_15_18040001 chr3R_18040001 RAL-307_100b 3382 chr3R 18061419 18061460 chr3R 18061536 18061577 28 114 11.0 0.0 5.5 4.3 158 chr3R 18061419 intergenic not near genes chr3R 18061498 intergenic not near genes chr3R 18061577 intergenic not near genes chr3R_28_18060001 chr3R_18060001 RAL-307_100b 3383 chr3R 18061548 18061615 chr3R 18063147 18063208 F-element 7 1597 0.0 0.0 0.0 7.0 1660 chr3R 18061548 intergenic not near genes chr3R 18062378 intergenic not near genes chr3R 18063208 intergenic not near genes chr3R_7_18060001 chr3R_18060001 RAL-307_100b 3384 chr3R 18065627 18065666 chr3R 18065745 18065801 10 122 3.5 12.5 8.0 1.1 174 chr3R 18065627 intergenic not near genes chr3R 18065714 intergenic not near genes chr3R 18065801 intergenic not near genes chr3R_10_18065001 chr3R_18065001 RAL-307_100b 3385 chr3R 18075333 18075370 chr3R 18075468 18075498 12 130 30.5 15.0 22.8 0.5 165 chr3R 18075333 intergenic not near genes chr3R 18075416 intergenic not near genes chr3R 18075498 intergenic not near genes chr3R_12_18075001 chr3R_18075001 RAL-307_100b 3386 chr3R 18098275 18098292 chr3R 18098355 18098394 8 98 12.0 18.5 15.2 0.5 119 chr3R 18098275 intron sr + chr3R 18098334 intron sr + chr3R 18098394 intron sr + chr3R_8_18095001 chr3R_18095001 RAL-307_100b 3387 chr3R 18107117 18107140 chr3R 18107225 18107248 14 107 0.0 24.0 12.0 1.1 131 chr3R 18107117 intron sr + chr3R 18107182 intron sr + chr3R 18107248 intron sr + chr3R_14_18105001 chr3R_18105001 RAL-307_100b 3388 chr3R 18117393 18117438 chr3R 18117494 18117539 7 99 6.5 9.5 8.0 0.8 146 chr3R 18117393 intron sr + chr3R 18117466 intron sr + chr3R 18117539 intron sr + chr3R_7_18115001 chr3R_18115001 RAL-307_100b 3389 chr3R 18119721 18119753 chr3R 18119822 18119855 20 100 9.0 12.5 10.8 1.7 134 chr3R 18119721 intron sr + chr3R 18119788 intron sr + chr3R 18119855 intron sr + chr3R_20_18115001 chr3R_18115001 RAL-307_100b 3390 chr3R 18122882 18122916 chr3R 18122968 18123018 9 96 5.5 12.0 8.8 0.9 136 chr3R 18122882 intron sr + chr3R 18122950 intron sr + chr3R 18123018 intron sr + chr3R_9_18120001 chr3R_18120001 RAL-307_100b 3391 chr3R 18157572 18157623 chr3R 18157704 18157756 23 132 0.0 14.0 7.0 2.9 184 chr3R 18157572 intergenic CR45103 + chr3R 18157664 intergenic CR45103 + chr3R 18157756 5` UTR CR45103 + chr3R_23_18155001 chr3R_18155001 RAL-307_100b 3392 chr3R 18215419 18215464 chr3R 18377651 18377697 7 162231 8.0 0.0 4.0 1.4 162278 chr3R 18215419 intergenic CG7985 + chr3R 18296558 intron l(3)05822 - chr3R 18377697 intergenic CG7675 - chr3R_7_18295001 chr3R_18295001 RAL-307_100b 3393 chr3R 18239637 18239651 chr3R 18239748 18239762 14 111 37.0 15.5 26.2 0.5 125 chr3R 18239637 3` UTR CG7156 - chr3R 18239700 3` UTR CG7156 - chr3R 18239762 3` UTR CG7156 - chr3R_14_18235001 chr3R_18235001 RAL-307_100b 3394 chr3R 18239653 18239693 chr3R 18239747 18239794 31 108 16.5 15.5 16.0 1.8 141 chr3R 18239653 3` UTR CG7156 - chr3R 18239724 3` UTR CG7156 - chr3R 18239794 3` UTR CG7156 - chr3R_31_18235001 chr3R_18235001 RAL-307_100b 3395 chr3R 18263295 18263295 chr3R 29382913 29382915 4 11119620 64.0 55.0 59.5 0.1 11119620 chr3R 18263295 intergenic not near genes chr3R 23823105 intron CG34355 + chr3R 29382915 intron Ptp99A + chr3R_4_23820001 chr3R_23820001 RAL-307_100b 3396 chr3R 18281260 18281313 chr3R 18281387 18281439 39 123 15.0 13.0 14.0 2.6 179 chr3R 18281260 intron eIF-1A + chr3R 18281350 intron eIF-1A + chr3R 18281439 intron eIF-1A + chr3R_39_18280001 chr3R_18280001 RAL-307_100b 3397 chr3R 18291821 18291882 chr3R 18291929 18291990 72 106 9.5 10.5 10.0 6.5 169 chr3R 18291821 intron l(3)05822 - chr3R 18291906 intron l(3)05822 - chr3R 18291990 intron l(3)05822 - chr3R_72_18290001 chr3R_18290001 RAL-307_100b 3398 chr3R 18302967 18302990 chr3R 18303096 18303119 11 129 11.0 0.0 5.5 1.7 152 chr3R 18302967 intergenic CG7126 -,PKD - chr3R 18303043 intergenic CG7126 -,PKD - chr3R 18303119 intergenic PKD -,CG7126 - chr3R_11_18300001 chr3R_18300001 RAL-307_100b 3399 chr3R 18331757 18331765 chr3R 18333276 18333278 hopper2 4 1518 34.0 0.0 17.0 0.2 1521 chr3R 18331757 3` UTR CG15803 - chr3R 18332518 intron CG15803 - chr3R 18333278 3` UTR CG15803 - chr3R_4_18330001 chr3R_18330001 RAL-307_100b 3400 chr3R 18341987 18342045 chr3R 18342090 18342148 44 96 17.0 11.0 14.0 2.9 161 chr3R 18341987 intron CG15803 - chr3R 18342068 intron CG15803 - chr3R 18342148 intron CG15803 - chr3R_44_18340001 chr3R_18340001 RAL-307_100b 3401 chr3R 18352552 18352609 chr3R 18352670 18352727 43 117 7.0 15.5 11.2 3.5 175 chr3R 18352552 intron CG15803 - chr3R 18352640 intron CG15803 - chr3R 18352727 3` UTR CG15803 - chr3R_43_18350001 chr3R_18350001 RAL-307_100b 3402 chr3R 18215572 18215646 chr3R 18377696 18377707 10 162067 0.0 0.0 0.0 10.0 162135 chr3R 18215572 intergenic not near genes chr3R 18296640 intron l(3)05822 - chr3R 18377707 intergenic CG7675 - chr3R_10_18295001 chr3R_18295001 RAL-307_100b 3403 chr3R 18473232 18473255 chr3R 18473344 18473367 12 112 0.0 27.5 13.8 0.8 135 chr3R 18473232 intron fru - chr3R 18473300 intron fru - chr3R 18473367 intron fru - chr3R_12_18470001 chr3R_18470001 RAL-307_100b 3404 chr3R 18485403 18485462 chr3R 18485529 18485569 24 121 10.0 8.5 9.2 2.4 166 chr3R 18485403 intron fru - chr3R 18485486 intron fru - chr3R 18485569 intron fru - chr3R_24_18485001 chr3R_18485001 RAL-307_100b 3405 chr3R 18498163 18498186 chr3R 18498264 18498270 15 98 17.0 12.0 14.5 1.0 107 chr3R 18498163 intron fru - chr3R 18498216 intron fru - chr3R 18498270 intron fru - chr3R_15_18495001 chr3R_18495001 RAL-307_100b 3406 chr3R 18500714 18500739 chr3R 18500860 18500873 22 145 0.0 27.0 13.5 1.5 159 chr3R 18500714 intron fru - chr3R 18500794 intron fru - chr3R 18500873 intron fru - chr3R_22_18500001 chr3R_18500001 RAL-307_100b 3407 chr3R 18528341 18528392 chr3R 18528453 18528504 45 107 12.0 7.0 9.5 4.3 163 chr3R 18528341 intron fru - chr3R 18528422 intron fru - chr3R 18528504 intron fru - chr3R_45_18525001 chr3R_18525001 RAL-307_100b 3408 chr3R 18559404 18559414 chr3R 18559506 18559516 8 102 6.5 0.0 3.2 1.9 112 chr3R 18559404 intergenic CG7691 + chr3R 18559460 intergenic CG7691 + chr3R 18559516 intergenic CG7691 + chr3R_8_18555001 chr3R_18555001 RAL-307_100b 3409 chr3R 18562547 18562589 chr3R 18562691 18562734 19 144 8.0 11.5 9.8 1.8 187 chr3R 18562547 intergenic not near genes chr3R 18562640 intergenic not near genes chr3R 18562734 intergenic not near genes chr3R_19_18560001 chr3R_18560001 RAL-307_100b 3410 chr3R 18606497 18606528 chr3R 18610749 18610785 F-element 20 4257 9.0 19.5 14.2 1.3 4288 chr3R 18606497 intron,intron qin +,CG14304 - chr3R 18608641 intron,intron qin +,CG14304 - chr3R 18610785 intron,intron qin +,CG14304 - chr3R_20_18605001 chr3R_18605001 RAL-307_100b 3411 chr3R 18611577 18611585 chr3R 18611688 18611696 4 111 0.0 0.5 0.2 3.3 119 chr3R 18611577 intron,intron qin +,CG14304 - chr3R 18611636 intron,intron qin +,CG14304 - chr3R 18611696 intron,intron qin +,CG14304 - chr3R_4_18610001 chr3R_18610001 RAL-307_100b 3412 chr3R 18611586 18611590 chr3R 18611671 18611701 4 104 0.0 0.5 0.2 3.3 115 chr3R 18611586 intron,intron qin +,CG14304 - chr3R 18611644 intron,intron qin +,CG14304 - chr3R 18611701 intron,intron qin +,CG14304 - chr3R_4_18610001 chr3R_18610001 RAL-307_100b 3413 chr3R 18615347 18615406 chr3R 18615461 18615520 31 113 5.0 14.0 9.5 3.0 173 chr3R 18615347 intron,intron qin +,CG14304 - chr3R 18615434 intron,intron qin +,CG14304 - chr3R 18615520 intron,intron qin +,CG14304 - chr3R_31_18615001 chr3R_18615001 RAL-307_100b 3414 chr3R 18617688 18617741 chr3R 18617793 18617846 32 104 6.5 8.5 7.5 3.8 158 chr3R 18617688 intron,intron qin +,CG14304 - chr3R 18617767 intron,intron qin +,CG14304 - chr3R 18617846 intron,intron qin +,CG14304 - chr3R_32_18615001 chr3R_18615001 RAL-307_100b 3415 chr3R 18628756 18628794 chr3R 18628857 18628895 52 100 10.0 13.0 11.5 4.2 139 chr3R 18628756 intron qin + chr3R 18628826 intron qin + chr3R 18628895 intron qin + chr3R_52_18625001 chr3R_18625001 RAL-307_100b 3416 chr3R 18695777 18695793 chr3R 18695890 18695906 17 112 14.5 9.5 12.0 1.3 129 chr3R 18695777 3` UTR CG34282 + chr3R 18695842 intergenic CG34282 + chr3R 18695906 intergenic CG34282 + chr3R_17_18695001 chr3R_18695001 RAL-307_100b 3417 chr3R 18697535 18697590 chr3R 18697633 18697685 48 101 12.0 15.0 13.5 3.3 150 chr3R 18697535 intergenic not near genes chr3R 18697610 intergenic not near genes chr3R 18697685 intergenic not near genes chr3R_48_18695001 chr3R_18695001 RAL-307_100b 3418 chr3R 18730000 18730038 chr3R 18730101 18730127 25 96 13.0 12.5 12.8 1.8 127 chr3R 18730000 exon Cha + chr3R 18730064 intron Cha + chr3R 18730127 exon Cha + chr3R_25_18730001 chr3R_18730001 RAL-307_100b 3419 chr3R 18770269 18770322 chr3R 18770376 18770429 46 104 7.5 11.5 9.5 4.4 160 chr3R 18770269 intron CG7720 - chr3R 18770349 intron CG7720 - chr3R 18770429 intron CG7720 - chr3R_46_18770001 chr3R_18770001 RAL-307_100b 3420 chr3R 18781670 18781724 chr3R 18781771 18781814 47 95 16.0 17.5 16.8 2.6 144 chr3R 18781670 intron CG7720 - chr3R 18781742 intron CG7720 - chr3R 18781814 intron CG7720 - chr3R_47_18780001 chr3R_18780001 RAL-307_100b 3421 chr3R 18791483 18791507 chr3R 18791577 18791610 15 99 18.0 6.0 12.0 1.2 127 chr3R 18791483 intron CG7720 - chr3R 18791546 intron CG7720 - chr3R 18791610 intron CG7720 - chr3R_15_18790001 chr3R_18790001 RAL-307_100b 3422 chr3R 18791508 18791515 chr3R 18791574 18791618 5 88 13.0 6.5 9.8 0.5 110 chr3R 18791508 intron CG7720 - chr3R 18791563 intron CG7720 - chr3R 18791618 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-307_100b 3423 chr3R 18792779 18792835 chr3R 18792887 18792943 18 105 7.0 0.0 3.5 4.0 164 chr3R 18792779 intron CG7720 - chr3R 18792861 intron CG7720 - chr3R 18792943 intron CG7720 - chr3R_18_18790001 chr3R_18790001 RAL-307_100b 3424 chr3R 18807304 18807333 chr3R 18807405 18807429 20 99 11.0 0.0 5.5 3.1 125 chr3R 18807304 intron CG18208 - chr3R 18807366 intron CG18208 - chr3R 18807429 intron CG18208 - chr3R_20_18805001 chr3R_18805001 RAL-307_100b 3425 chr3R 18812063 18812100 chr3R 18812156 18812198 36 101 25.5 19.0 22.2 1.6 135 chr3R 18812063 intron CG18208 - chr3R 18812130 intron CG18208 - chr3R 18812198 intron CG18208 - chr3R_36_18810001 chr3R_18810001 RAL-307_100b 3426 chr3R 18812101 18812107 chr3R 18812154 18812210 5 91 23.5 17.5 20.5 0.2 109 chr3R 18812101 intron CG18208 - chr3R 18812156 intron CG18208 - chr3R 18812210 intron CG18208 - chr3R_5_18810001 chr3R_18810001 RAL-307_100b 3427 chr3R 19012993 19013052 chr3R 19013102 19013161 60 106 7.0 15.5 11.2 4.9 168 chr3R 19012993 intron gukh + chr3R 19013077 intron gukh + chr3R 19013161 intron gukh + chr3R_60_19010001 chr3R_19010001 RAL-307_100b 3428 chr3R 19033901 19033934 chr3R 19034004 19034032 21 100 26.0 13.5 19.8 1.0 131 chr3R 19033901 intron CG6026 + chr3R 19033966 intron CG6026 + chr3R 19034032 intron CG6026 + chr3R_21_19030001 chr3R_19030001 RAL-307_100b 3429 chr3R 19033936 19033961 chr3R 19034028 19034047 20 98 17.5 26.5 22.0 0.9 111 chr3R 19033936 intron CG6026 + chr3R 19033992 intron CG6026 + chr3R 19034047 intron CG6026 + chr3R_20_19030001 chr3R_19030001 RAL-307_100b 3430 chr3R 19106806 19106815 chr3R 19106914 19106919 4 106 32.0 3.5 17.8 0.2 113 chr3R 19106806 intron CG6040 + chr3R 19106862 intron CG6040 + chr3R 19106919 intron CG6040 + chr3R_4_19105001 chr3R_19105001 RAL-307_100b 3431 chr3R 19106819 19106849 chr3R 19106911 19106920 8 83 17.5 0.0 8.8 0.8 101 chr3R 19106819 intron CG6040 + chr3R 19106870 intron CG6040 + chr3R 19106920 intron CG6040 + chr3R_8_19105001 chr3R_19105001 RAL-307_100b 3432 chr3R 19116900 19116902 chr3R 19117043 19117045 4 143 0.5 0.0 0.2 3.3 145 chr3R 19116900 intron CG6040 + chr3R 19116972 intron CG6040 + chr3R 19117045 intron CG6040 + chr3R_4_19115001 chr3R_19115001 RAL-307_100b 3433 chr3R 19159941 19159951 chr3R 19160045 19160055 5 102 15.0 11.5 13.2 0.4 114 chr3R 19159941 3` UTR nos + chr3R 19159998 3` UTR nos + chr3R 19160055 3` UTR nos + chr3R_5_19155001 chr3R_19155001 RAL-307_100b 3434 chr3R 19192941 19193007 chr3R 19197279 19197336 F-element 19 4333 0.5 12.5 6.5 2.5 4395 chr3R 19192941 intron CG31475 + chr3R 19195138 intron CG31475 + chr3R 19197336 intron CG31475 + chr3R_19_19195001 chr3R_19195001 RAL-307_100b 3435 chr3R 19337203 19337211 chr3R 19337294 19337297 12 98 34.5 48.5 41.5 0.3 94 chr3R 19337203 intergenic not near genes chr3R 19337250 intergenic not near genes chr3R 19337297 intergenic not near genes chr3R_12_19335001 chr3R_19335001 RAL-307_100b 3436 chr3R 19340374 19340430 chr3R 19340473 19340532 41 98 18.0 16.5 17.2 2.3 158 chr3R 19340374 intergenic not near genes chr3R 19340453 intergenic not near genes chr3R 19340532 intergenic not near genes chr3R_41_19340001 chr3R_19340001 RAL-307_100b 3437 chr3R 19344651 19344698 chr3R 19344811 19344858 17 159 12.0 11.0 11.5 1.4 207 chr3R 19344651 intergenic not near genes chr3R 19344754 intergenic not near genes chr3R 19344858 intergenic not near genes chr3R_17_19340001 chr3R_19340001 RAL-307_100b 3438 chr3R 19438344 19438402 chr3R 19438452 19438498 50 104 12.5 14.5 13.5 3.4 154 chr3R 19438344 intron CG31221 + chr3R 19438421 intron CG31221 + chr3R 19438498 intron CG31221 + chr3R_50_19435001 chr3R_19435001 RAL-307_100b 3439 chr3R 19494386 19494405 chr3R 19494491 19494510 8 105 14.5 15.0 14.8 0.5 124 chr3R 19494386 intron Dys + chr3R 19494448 intron Dys + chr3R 19494510 intron Dys + chr3R_8_19490001 chr3R_19490001 RAL-307_100b 3440 chr3R 19570281 19570339 chr3R 19570382 19570440 55 98 15.0 23.0 19.0 2.8 159 chr3R 19570281 intron Dys + chr3R 19570360 intron Dys + chr3R 19570440 intron Dys + chr3R_55_19570001 chr3R_19570001 RAL-307_100b 3441 chr3R 19602737 19602766 chr3R 19602840 19602869 28 102 23.5 14.0 18.8 1.4 132 chr3R 19602737 intergenic CG7333 + chr3R 19602803 intergenic CG7333 + chr3R 19602869 intergenic CG7333 + chr3R_28_19600001 chr3R_19600001 RAL-307_100b 3442 chr3R 19602768 19602791 chr3R 19602839 19602894 10 98 14.0 13.0 13.5 0.7 126 chr3R 19602768 intergenic CG7333 + chr3R 19602831 intergenic CG7333 + chr3R 19602894 intergenic CG7333 +,CG7342 + chr3R_10_19600001 chr3R_19600001 RAL-307_100b 3443 chr3R 19633271 19633326 chr3R 19633374 19633402 45 105 14.5 12.0 13.2 3.2 131 chr3R 19633271 intergenic subdued - chr3R 19633336 intergenic subdued - chr3R 19633402 intergenic subdued - chr3R_45_19630001 chr3R_19630001 RAL-307_100b 3444 chr3R 19634848 19634855 chr3R 19634950 19634957 6 102 20.5 2.0 11.2 0.5 109 chr3R 19634848 intron subdued - chr3R 19634902 intron subdued - chr3R 19634957 intron,5` UTR subdued -,CG34138 + chr3R_6_19630001 chr3R_19630001 RAL-307_100b 3445 chr3R 19661287 19661300 chr3R 24590718 24590718 6 4929429 39.0 65.5 52.2 0.1 4929431 chr3R 19661287 intron ort + chr3R 22126002 exon CG42390 + chr3R 24590718 5` UTR mld + chr3R_6_22125001 chr3R_22125001 RAL-307_100b 3446 chr3R 19718836 19718874 chr3R 19718981 19719024 35 148 11.0 9.0 10.0 3.2 188 chr3R 19718836 intergenic not near genes chr3R 19718930 intergenic not near genes chr3R 19719024 intergenic not near genes chr3R_35_19715001 chr3R_19715001 RAL-307_100b 3447 chr3R 19729726 19729771 chr3R 19729827 19729832 7 90 14.5 7.5 11.0 0.6 106 chr3R 19729726 intergenic not near genes chr3R 19729779 intergenic not near genes chr3R 19729832 intergenic not near genes chr3R_7_19725001 chr3R_19725001 RAL-307_100b 3448 chr3R 19783158 19783212 chr3R 19783271 19783325 37 112 9.0 12.5 10.8 3.1 167 chr3R 19783158 intergenic CG11407 +,CG11453 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783325 intergenic CG11407 +,CG11453 + chr3R_37_19780001 chr3R_19780001 RAL-307_100b 3449 chr3R 19793872 19793888 chr3R 19793990 19794006 19 117 34.0 18.0 26.0 0.7 134 chr3R 19793872 intergenic bnl - chr3R 19793939 intergenic bnl - chr3R 19794006 intergenic bnl - chr3R_19_19790001 chr3R_19790001 RAL-307_100b 3450 chr3R 19793890 19793906 chr3R 19793988 19794021 19 116 23.5 15.5 19.5 0.9 131 chr3R 19793890 intergenic bnl - chr3R 19793956 intergenic bnl - chr3R 19794021 intergenic bnl - chr3R_19_19790001 chr3R_19790001 RAL-307_100b 3451 chr3R 19793907 19793928 chr3R 19793985 19794002 25 111 10.5 12.5 11.5 2.0 95 chr3R 19793907 intergenic bnl - chr3R 19793954 intergenic bnl - chr3R 19794002 intergenic bnl - chr3R_25_19790001 chr3R_19790001 RAL-307_100b 3452 chr3R 19800663 19800690 chr3R 19800758 19800758 14 97 27.5 22.5 25.0 0.5 95 chr3R 19800663 intron bnl - chr3R 19800710 intron bnl - chr3R 19800758 intron bnl - chr3R_14_19800001 chr3R_19800001 RAL-307_100b 3453 chr3R 19800691 19800713 chr3R 19800757 19800809 18 94 19.0 25.0 22.0 0.8 118 chr3R 19800691 intron bnl - chr3R 19800750 intron bnl - chr3R 19800809 intron bnl - chr3R_18_19800001 chr3R_19800001 RAL-307_100b 3454 chr3R 19827500 19827558 chr3R 19827611 19827669 35 110 7.5 12.0 9.8 3.2 169 chr3R 19827500 intron bnl - chr3R 19827584 intron bnl - chr3R 19827669 exon bnl - chr3R_35_19825001 chr3R_19825001 RAL-307_100b 3455 chr3R 19908281 19908304 chr3R 19908366 19908413 21 104 0.0 16.0 8.0 2.3 132 chr3R 19908281 intron RhoGAP92B + chr3R 19908347 intron RhoGAP92B + chr3R 19908413 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_21_19905001 chr3R_19905001 RAL-307_100b 3456 chr3R 19945944 19946003 chr3R 19946072 19946131 48 124 12.0 15.0 13.5 3.3 187 chr3R 19945944 intron Hs6st - chr3R 19946038 intron Hs6st - chr3R 19946131 intron Hs6st - chr3R_48_19945001 chr3R_19945001 RAL-307_100b 3457 chr3R 19950006 19950064 chr3R 19950109 19950162 48 100 11.5 19.5 15.5 2.9 156 chr3R 19950006 intron Hs6st - chr3R 19950084 intron Hs6st - chr3R 19950162 intron Hs6st - chr3R_48_19950001 chr3R_19950001 RAL-307_100b 3458 chr3R 19953923 19953982 chr3R 19954025 19954073 41 93 17.0 22.0 19.5 2.0 150 chr3R 19953923 intron Hs6st - chr3R 19953998 intron Hs6st - chr3R 19954073 intron Hs6st - chr3R_41_19950001 chr3R_19950001 RAL-307_100b 3459 chr3R 19981434 19981451 chr3R 19981539 19981556 17 105 7.5 13.5 10.5 1.5 122 chr3R 19981434 intron Hs6st - chr3R 19981495 intron Hs6st - chr3R 19981556 intron Hs6st - chr3R_17_19980001 chr3R_19980001 RAL-307_100b 3460 chr3R 20008797 20008855 chr3R 20008903 20008961 48 103 16.0 21.0 18.5 2.5 164 chr3R 20008797 intergenic MED25 +,Hs6st - chr3R 20008879 intergenic MED25 +,Hs6st - chr3R 20008961 5` UTR MED25 + chr3R_48_20005001 chr3R_20005001 RAL-307_100b 3461 chr3R 20045680 20045728 chr3R 20045791 20045838 17 107 9.5 10.5 10.0 1.5 158 chr3R 20045680 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045759 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R 20045838 intron,5` UTR,3` UTR CG17193 -,CG33934 +,Indy-2 + chr3R_17_20045001 chr3R_20045001 RAL-307_100b 3462 chr3R 20109511 20109566 chr3R 20114742 20114797 copia 53 5230 13.0 11.0 12.0 4.1 5286 chr3R 20109511 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114797 intergenic CG10887 + chr3R_53_20110001 chr3R_20110001 RAL-307_100b 3463 chr3R 20156668 20156698 chr3R 20165863 20165873 roo 27 9190 27.5 21.0 24.2 1.1 9205 chr3R 20156668 intergenic not near genes chr3R 20161270 intergenic not near genes chr3R 20165873 intergenic not near genes chr3R_27_20160001 chr3R_20160001 RAL-307_100b 3464 chr3R 20156700 20156719 chr3R 20165860 20165914 roo 20 9188 17.5 19.5 18.5 1.0 9214 chr3R 20156700 intergenic not near genes chr3R 20161307 intergenic not near genes chr3R 20165914 intergenic not near genes chr3R_20_20160001 chr3R_20160001 RAL-307_100b 3465 chr3R 20180688 20180724 chr3R 20180798 20180820 23 107 14.0 14.0 14.0 1.5 132 chr3R 20180688 intergenic not near genes chr3R 20180754 intergenic not near genes chr3R 20180820 intergenic not near genes chr3R_23_20180001 chr3R_20180001 RAL-307_100b 3466 chr3R 20187283 20187289 chr3R 20187386 20187386 5 102 0.5 0.0 0.2 4.2 103 chr3R 20187283 intergenic not near genes chr3R 20187334 intergenic not near genes chr3R 20187386 intergenic not near genes chr3R_5_20185001 chr3R_20185001 RAL-307_100b 3467 chr3R 20195664 20195722 chr3R 20195765 20195803 38 98 11.0 12.5 11.8 3.0 139 chr3R 20195664 intergenic not near genes chr3R 20195734 intergenic not near genes chr3R 20195803 intergenic not near genes chr3R_38_20195001 chr3R_20195001 RAL-307_100b 3468 chr3R 20205534 20205596 chr3R 20205681 20205743 28 145 11.5 10.0 10.8 2.4 209 chr3R 20205534 intron Nlg4 + chr3R 20205638 intron Nlg4 + chr3R 20205743 intron Nlg4 + chr3R_28_20205001 chr3R_20205001 RAL-307_100b 3469 chr3R 20266490 20266545 chr3R 20272986 20273018 Burdock 56 6492 13.0 16.0 14.5 3.6 6528 chr3R 20266490 intron cic + chr3R 20269754 intron cic + chr3R 20273018 intron cic + chr3R_56_20265001 chr3R_20265001 RAL-307_100b 3470 chr3R 20282251 20282307 chr3R 20282352 20282408 49 99 6.0 12.5 9.2 4.8 157 chr3R 20282251 intron cic + chr3R 20282330 intron cic + chr3R 20282408 intron cic + chr3R_49_20280001 chr3R_20280001 RAL-307_100b 3471 chr3R 20312833 20312886 chr3R 20312940 20312997 28 109 12.0 7.0 9.5 2.7 164 chr3R 20312833 intron CG42668 + chr3R 20312915 intron CG42668 + chr3R 20312997 intron CG42668 + chr3R_28_20310001 chr3R_20310001 RAL-307_100b 3472 chr3R 20330976 20330979 chr3R 20331487 20331490 roo 5 511 35.0 14.5 24.8 0.2 514 chr3R 20330976 intergenic Sirt2 + chr3R 20331233 intergenic Sirt2 + chr3R 20331490 intergenic not near genes chr3R_5_20330001 chr3R_20330001 RAL-307_100b 3473 chr3R 20330980 20331027 chr3R 20331484 20331538 roo 32 510 11.5 13.0 12.2 2.4 558 chr3R 20330980 intergenic Sirt2 + chr3R 20331259 intergenic Sirt2 + chr3R 20331538 intergenic not near genes chr3R_32_20330001 chr3R_20330001 RAL-307_100b 3474 chr3R 20365746 20365788 chr3R 20365841 20365894 38 102 11.0 16.0 13.5 2.6 148 chr3R 20365746 intergenic not near genes chr3R 20365820 intergenic not near genes chr3R 20365894 intergenic not near genes chr3R_38_20365001 chr3R_20365001 RAL-307_100b 3475 chr3R 20389669 20389726 chr3R 20389776 20389833 49 101 10.0 11.0 10.5 4.3 164 chr3R 20389669 intron Gfrl - chr3R 20389751 intron Gfrl - chr3R 20389833 intron Gfrl - chr3R_49_20385001 chr3R_20385001 RAL-307_100b 3476 chr3R 20411385 20411422 chr3R 20411670 20411711 36 288 13.5 11.5 12.5 2.7 326 chr3R 20411385 intron Gfrl - chr3R 20411548 intron Gfrl - chr3R 20411711 intron Gfrl - chr3R_36_20410001 chr3R_20410001 RAL-307_100b 3477 chr3R 20433076 20433135 chr3R 20433191 20433250 41 111 10.5 12.5 11.5 3.3 174 chr3R 20433076 intron Gfrl - chr3R 20433163 intron Gfrl - chr3R 20433250 intron Gfrl - chr3R_41_20430001 chr3R_20430001 RAL-307_100b 3478 chr3R 20443127 20443185 chr3R 20443274 20443332 40 143 12.5 13.5 13.0 2.9 205 chr3R 20443127 intron Gfrl - chr3R 20443230 intron Gfrl - chr3R 20443332 intron Gfrl - chr3R_40_20440001 chr3R_20440001 RAL-307_100b 3479 chr3R 20450130 20450145 chr3R 20450240 20450255 14 110 0.0 8.5 4.2 2.7 125 chr3R 20450130 intron Gfrl - chr3R 20450192 intron Gfrl - chr3R 20450255 intron Gfrl - chr3R_14_20450001 chr3R_20450001 RAL-307_100b 3480 chr3R 20469257 20469451 chr3R 20469379 20469544 20 115 0.0 0.0 0.0 20.0 287 chr3R 20469257 intron Gfrl - chr3R 20469400 intron Gfrl - chr3R 20469544 intron Gfrl - chr3R_20_20465001 chr3R_20465001 RAL-307_100b 3481 chr3R 20498515 20498548 chr3R 20498611 20498666 6 113 10.0 6.0 8.0 0.7 151 chr3R 20498515 intergenic not near genes chr3R 20498590 intergenic not near genes chr3R 20498666 intergenic not near genes chr3R_6_20495001 chr3R_20495001 RAL-307_100b 3482 chr3R 20506567 20506616 chr3R 20507395 20507418 BS 53 824 1.5 19.0 10.2 4.7 851 chr3R 20506567 intergenic Or92a + chr3R 20506992 intergenic CG4288 - chr3R 20507418 3` UTR CG4288 - chr3R_53_20505001 chr3R_20505001 RAL-307_100b 3483 chr3R 20512980 20513032 chr3R 20515708 20515760 opus 27 2725 12.0 7.0 9.5 2.6 2780 chr3R 20512980 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515760 intergenic not near genes chr3R_27_20510001 chr3R_20510001 RAL-307_100b 3484 chr3R 20516515 20516571 chr3R 20516896 20516953 48 380 13.5 17.0 15.2 3.0 438 chr3R 20516515 intergenic not near genes chr3R 20516734 intergenic not near genes chr3R 20516953 intergenic not near genes chr3R_48_20515001 chr3R_20515001 RAL-307_100b 3485 chr3R 20657294 20657346 chr3R 20657464 20657486 36 167 11.5 10.0 10.8 3.1 192 chr3R 20657294 intron Nep4 - chr3R 20657390 intron Nep4 - chr3R 20657486 intron Nep4 - chr3R_36_20655001 chr3R_20655001 RAL-307_100b 3486 chr3R 20667426 20667463 chr3R 20667860 20667897 34 431 12.5 12.0 12.2 2.6 471 chr3R 20667426 intergenic not near genes chr3R 20667662 intergenic not near genes chr3R 20667897 intergenic not near genes chr3R_34_20665001 chr3R_20665001 RAL-307_100b 3487 chr3R 20675978 20675986 chr3R 20676087 20676095 8 108 39.0 16.5 27.8 0.3 117 chr3R 20675978 intergenic CG4000 - chr3R 20676036 intergenic CG4000 - chr3R 20676095 intergenic CG4000 - chr3R_8_20675001 chr3R_20675001 RAL-307_100b 3488 chr3R 20675987 20676033 chr3R 20676086 20676142 49 106 14.0 15.5 14.8 3.1 155 chr3R 20675987 intergenic CG4000 - chr3R 20676064 intergenic CG4000 - chr3R 20676142 intergenic CG4000 - chr3R_49_20675001 chr3R_20675001 RAL-307_100b 3489 chr3R 20703458 20703513 chr3R 20703876 20703927 42 417 9.5 10.5 10.0 3.8 469 chr3R 20703458 intron Oamb - chr3R 20703692 intron Oamb - chr3R 20703927 intron Oamb - chr3R_42_20700001 chr3R_20700001 RAL-307_100b 3490 chr3R 20707719 20707771 chr3R 20707959 20708011 47 238 12.5 12.5 12.5 3.5 292 chr3R 20707719 intron Oamb - chr3R 20707865 intron Oamb - chr3R 20708011 intron Oamb - chr3R_47_20705001 chr3R_20705001 RAL-307_100b 3491 chr3R 20716784 20716843 chr3R 20717146 20717201 58 357 20.0 17.5 18.8 2.9 417 chr3R 20716784 intergenic not near genes chr3R 20716992 intergenic not near genes chr3R 20717201 intergenic not near genes chr3R_58_20715001 chr3R_20715001 RAL-307_100b 3492 chr3R 20730918 20730948 chr3R 20731034 20731060 23 115 14.0 0.0 7.0 2.9 142 chr3R 20730918 intergenic not near genes chr3R 20730989 intergenic not near genes chr3R 20731060 intergenic not near genes chr3R_23_20730001 chr3R_20730001 RAL-307_100b 3493 chr3R 20733737 20733794 chr3R 20733854 20733881 53 114 19.0 23.5 21.2 2.4 144 chr3R 20733737 intergenic not near genes chr3R 20733809 intergenic not near genes chr3R 20733881 intergenic not near genes chr3R_53_20730001 chr3R_20730001 RAL-307_100b 3494 chr3R 20764388 20764411 chr3R 20764509 20764532 17 120 29.5 15.0 22.2 0.7 144 chr3R 20764388 intron Syp + chr3R 20764460 intron Syp + chr3R 20764532 intron Syp + chr3R_17_20760001 chr3R_20760001 RAL-307_100b 3495 chr3R 20764413 20764443 chr3R 20764507 20764514 29 115 13.0 13.5 13.2 2.0 101 chr3R 20764413 intron Syp + chr3R 20764464 intron Syp + chr3R 20764514 intron Syp + chr3R_29_20760001 chr3R_20760001 RAL-307_100b 3496 chr3R 20771707 20771720 chr3R 20771798 20771826 11 97 0.0 20.5 10.2 1.0 119 chr3R 20771707 intron,intron Syp +,Takl1 - chr3R 20771766 intron,intron Syp +,Takl1 - chr3R 20771826 intron,exon Syp +,Takl1 - chr3R_11_20770001 chr3R_20770001 RAL-307_100b 3497 chr3R 20771721 20771731 chr3R 20771787 20771802 9 81 0.5 13.5 7.0 1.1 81 chr3R 20771721 intron,intron Syp +,Takl1 - chr3R 20771762 intron,intron Syp +,Takl1 - chr3R 20771802 intron,exon Syp +,Takl1 - chr3R_9_20770001 chr3R_20770001 RAL-307_100b 3498 chr3R 20787412 20787458 chr3R 20787528 20787574 32 114 17.5 20.5 19.0 1.6 162 chr3R 20787412 intron Syp + chr3R 20787493 intron Syp + chr3R 20787574 intron Syp + chr3R_32_20785001 chr3R_20785001 RAL-307_100b 3499 chr3R 20854472 20854490 chr3R 20859287 20859303 Doc 8 4812 37.5 21.5 29.5 0.3 4831 chr3R 20854472 intron Ir93a - chr3R 20856888 intron Ir93a - chr3R 20859303 exon Ir93a - chr3R_8_20855001 chr3R_20855001 RAL-307_100b 3500 chr3R 20854495 20854504 chr3R 20859278 20859319 Doc 8 4797 35.5 19.0 27.2 0.3 4824 chr3R 20854495 intron Ir93a - chr3R 20856907 intron Ir93a - chr3R 20859319 exon Ir93a - chr3R_8_20855001 chr3R_20855001 RAL-307_100b 3501 chr3R 20854509 20854520 chr3R 20859274 20859285 Doc 5 4770 27.5 16.5 22.0 0.2 4776 chr3R 20854509 intron Ir93a - chr3R 20856897 intron Ir93a - chr3R 20859285 exon Ir93a - chr3R_5_20855001 chr3R_20855001 RAL-307_100b 3502 chr3R 20870224 20870284 chr3R 20870334 20870394 67 109 15.5 20.5 18.0 3.5 170 chr3R 20870224 intergenic not near genes chr3R 20870309 intergenic not near genes chr3R 20870394 intergenic not near genes chr3R_67_20870001 chr3R_20870001 RAL-307_100b 3503 chr3R 20936062 20936108 chr3R 20936164 20936210 21 100 4.5 9.0 6.8 2.7 148 chr3R 20936062 intron CG31191 - chr3R 20936136 intron CG31191 - chr3R 20936210 intron CG31191 - chr3R_21_20935001 chr3R_20935001 RAL-307_100b 3504 chr3R 20968503 20968556 chr3R 20968631 20968684 56 126 14.5 14.5 14.5 3.6 181 chr3R 20968503 intron Atpalpha + chr3R 20968594 intron Atpalpha + chr3R 20968684 intron Atpalpha + chr3R_56_20965001 chr3R_20965001 RAL-307_100b 3505 chr3R 20990701 20990753 chr3R 20990803 20990860 48 105 11.0 8.0 9.5 4.6 159 chr3R 20990701 intron Calx + chr3R 20990780 intron Calx + chr3R 20990860 intron Calx + chr3R_48_20990001 chr3R_20990001 RAL-307_100b 3506 chr3R 21020376 21020432 chr3R 21020477 21020533 53 100 16.5 20.0 18.2 2.8 157 chr3R 21020376 3` UTR Rlip + chr3R 21020454 3` UTR Rlip + chr3R 21020533 3` UTR Rlip + chr3R_53_21020001 chr3R_21020001 RAL-307_100b 3507 chr3R 21074807 21074817 chr3R 21075047 21075062 9 244 14.5 27.5 21.0 0.4 255 chr3R 21074807 intron dmrt93B + chr3R 21074934 intron dmrt93B + chr3R 21075062 intron dmrt93B + chr3R_9_21070001 chr3R_21070001 RAL-307_100b 3508 chr3R 21074818 21074826 chr3R 21075028 21075061 8 239 12.0 21.0 16.5 0.5 243 chr3R 21074818 intron dmrt93B + chr3R 21074940 intron dmrt93B + chr3R 21075061 intron dmrt93B + chr3R_8_21070001 chr3R_21070001 RAL-307_100b 3509 chr3R 21108018 21108054 chr3R 21108300 21108340 27 284 14.0 13.5 13.8 1.8 322 chr3R 21108018 intergenic Sec15 -,rtet + chr3R 21108179 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_27_21105001 chr3R_21105001 RAL-307_100b 3510 chr3R 21141653 21141671 chr3R 21150159 21150173 Tirant 20 8503 37.5 18.5 28.0 0.7 8520 chr3R 21141653 intron SNF4Agamma + chr3R 21145913 intron SNF4Agamma + chr3R 21150173 intron SNF4Agamma + chr3R_20_21145001 chr3R_21145001 RAL-307_100b 3511 chr3R 21141672 21141682 chr3R 21150155 21150181 Tirant 20 8496 31.5 17.0 24.2 0.8 8509 chr3R 21141672 intron SNF4Agamma + chr3R 21145926 intron SNF4Agamma + chr3R 21150181 intron SNF4Agamma + chr3R_20_21145001 chr3R_21145001 RAL-307_100b 3512 chr3R 21141683 21141707 chr3R 21150153 21150211 Tirant 12 8490 19.5 16.5 18.0 0.6 8528 chr3R 21141683 intron SNF4Agamma + chr3R 21145947 intron SNF4Agamma + chr3R 21150211 intron SNF4Agamma + chr3R_12_21145001 chr3R_21145001 RAL-307_100b 3513 chr3R 21154528 21154559 chr3R 21154758 21154799 11 238 27.5 0.0 13.8 0.7 271 chr3R 21154528 intron SNF4Agamma + chr3R 21154664 intron SNF4Agamma + chr3R 21154799 intron SNF4Agamma + chr3R_11_21150001 chr3R_21150001 RAL-307_100b 3514 chr3R 21154561 21154587 chr3R 21154754 21154827 34 236 9.0 0.0 4.5 6.2 266 chr3R 21154561 intron SNF4Agamma + chr3R 21154694 intron SNF4Agamma + chr3R 21154827 intron SNF4Agamma + chr3R_34_21150001 chr3R_21150001 RAL-307_100b 3515 chr3R 21165066 21165118 chr3R 21165168 21165226 43 107 8.5 15.0 11.8 3.4 160 chr3R 21165066 intron,exon SNF4Agamma +,CG5810 + chr3R 21165146 intron,3` UTR SNF4Agamma +,CG5810 + chr3R 21165226 intron,3` UTR SNF4Agamma +,Snmp1 - chr3R_43_21165001 chr3R_21165001 RAL-307_100b 3516 chr3R 21182772 21182778 chr3R 21183408 21183414 5 636 34.5 9.5 22.0 0.2 642 chr3R 21182772 intron SNF4Agamma + chr3R 21183093 intron SNF4Agamma + chr3R 21183414 intron SNF4Agamma + chr3R_5_21180001 chr3R_21180001 RAL-307_100b 3517 chr3R 21182779 21182831 chr3R 21183407 21183467 27 635 10.0 9.0 9.5 2.6 688 chr3R 21182779 intron SNF4Agamma + chr3R 21183123 intron SNF4Agamma + chr3R 21183467 intron SNF4Agamma + chr3R_27_21180001 chr3R_21180001 RAL-307_100b 3518 chr3R 21188036 21188086 chr3R 21188171 21188220 14 133 0.0 0.0 0.0 14.0 184 chr3R 21188036 intron SNF4Agamma + chr3R 21188128 intron SNF4Agamma + chr3R 21188220 intron SNF4Agamma + chr3R_14_21185001 chr3R_21185001 RAL-307_100b 3519 chr3R 21214722 21214761 chr3R 21214919 21214928 30 194 11.5 13.0 12.2 2.3 206 chr3R 21214722 intergenic CG5862 + chr3R 21214825 intergenic CG5862 + chr3R 21214928 intergenic CG5862 + chr3R_30_21210001 chr3R_21210001 RAL-307_100b 3520 chr3R 21239781 21239957 chr3R 21239900 21240058 52 107 0.0 0.0 0.0 52.0 277 chr3R 21239781 intergenic not near genes chr3R 21239920 intergenic not near genes chr3R 21240058 intergenic not near genes chr3R_52_21235001 chr3R_21235001 RAL-307_100b 3521 chr3R 21274348 21274365 chr3R 21274467 21274484 16 118 23.0 13.5 18.2 0.8 136 chr3R 21274348 3` UTR CG3301 - chr3R 21274416 3` UTR CG3301 - chr3R 21274484 intron CG3301 - chr3R_16_21270001 chr3R_21270001 RAL-307_100b 3522 chr3R 21274366 21274645 chr3R 21274466 21274752 51 112 9.5 12.5 11.0 4.2 386 chr3R 21274366 3` UTR CG3301 - chr3R 21274559 3` UTR CG3301 - chr3R 21274752 intron CG3301 - chr3R_51_21270001 chr3R_21270001 RAL-307_100b 3523 chr3R 21383267 21383271 chr3R 21383372 21383373 6 104 0.0 4.0 2.0 2.0 106 chr3R 21383267 intergenic not near genes chr3R 21383320 intergenic not near genes chr3R 21383373 intergenic not near genes chr3R_6_21380001 chr3R_21380001 RAL-307_100b 3524 chr3R 21383272 21383301 chr3R 21383356 21383406 8 102 0.0 4.0 2.0 2.7 134 chr3R 21383272 intergenic not near genes chr3R 21383339 intergenic not near genes chr3R 21383406 intergenic not near genes chr3R_8_21380001 chr3R_21380001 RAL-307_100b 3525 chr3R 21385906 21385965 chr3R 21386008 21386067 48 96 17.5 17.5 17.5 2.6 161 chr3R 21385906 intergenic not near genes chr3R 21385986 intergenic not near genes chr3R 21386067 intergenic not near genes chr3R_48_21385001 chr3R_21385001 RAL-307_100b 3526 chr3R 21464385 21464428 chr3R 21464488 21464537 15 109 7.0 2.5 4.8 2.6 152 chr3R 21464385 intergenic not near genes chr3R 21464461 intergenic not near genes chr3R 21464537 intergenic not near genes chr3R_15_21460001 chr3R_21460001 RAL-307_100b 3527 chr3R 21471993 21472032 chr3R 21472099 21472113 37 104 19.5 22.0 20.8 1.7 120 chr3R 21471993 intergenic not near genes chr3R 21472053 intergenic not near genes chr3R 21472113 intergenic not near genes chr3R_37_21470001 chr3R_21470001 RAL-307_100b 3528 chr3R 21481361 21481373 chr3R 21481477 21481483 10 115 34.5 0.0 17.2 0.5 122 chr3R 21481361 intergenic not near genes chr3R 21481422 intergenic not near genes chr3R 21481483 intergenic not near genes chr3R_10_21480001 chr3R_21480001 RAL-307_100b 3529 chr3R 21517993 21518272 chr3R 21518147 21518381 18 126 0.0 0.0 0.0 18.0 388 chr3R 21517993 intergenic not near genes chr3R 21518187 intergenic not near genes chr3R 21518381 intergenic not near genes chr3R_18_21515001 chr3R_21515001 RAL-307_100b 3530 chr3R 21519961 21520132 chr3R 21520087 21520250 55 121 2.0 2.0 2.0 18.3 289 chr3R 21519961 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520250 intergenic not near genes chr3R_55_21520001 chr3R_21520001 RAL-307_100b 3531 chr3R 21586395 21586410 chr3R 21586504 21586518 13 108 39.5 15.0 27.2 0.5 123 chr3R 21586395 intron InR - chr3R 21586456 intron InR - chr3R 21586518 intron InR - chr3R_13_21585001 chr3R_21585001 RAL-307_100b 3532 chr3R 21586411 21586435 chr3R 21586502 21586514 26 101 25.5 14.0 19.8 1.2 103 chr3R 21586411 intron InR - chr3R 21586462 intron InR - chr3R 21586514 intron InR - chr3R_26_21585001 chr3R_21585001 RAL-307_100b 3533 chr3R 21586436 21586454 chr3R 21586500 21586538 20 93 14.5 13.5 14.0 1.3 102 chr3R 21586436 intron InR - chr3R 21586487 intron InR - chr3R 21586538 intron InR - chr3R_20_21585001 chr3R_21585001 RAL-307_100b 3534 chr3R 21725670 21725675 chr3R 21725831 21725835 4 161 0.0 17.0 8.5 0.4 165 chr3R 21725670 intergenic not near genes chr3R 21725752 intergenic not near genes chr3R 21725835 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-307_100b 3535 chr3R 21725676 21725687 chr3R 21725830 21725848 10 159 0.0 16.0 8.0 1.1 172 chr3R 21725676 intergenic not near genes chr3R 21725762 intergenic not near genes chr3R 21725848 intergenic not near genes chr3R_10_21725001 chr3R_21725001 RAL-307_100b 3536 chr3R 21761101 21761118 chr3R 21768513 21768535 mdg1 15 7414 35.5 21.0 28.2 0.5 7434 chr3R 21761101 exon CG42335 + chr3R 21764818 intron CG42335 + chr3R 21768535 exon CG42335 + chr3R_15_21760001 chr3R_21760001 RAL-307_100b 3537 chr3R 21761119 21761155 chr3R 21768511 21768563 mdg1 50 7402 13.5 20.5 17.0 2.8 7444 chr3R 21761119 exon CG42335 + chr3R 21764841 intron CG42335 + chr3R 21768563 exon CG42335 + chr3R_50_21760001 chr3R_21760001 RAL-307_100b 3538 chr3R 21897546 21897589 chr3R 21897831 21897842 41 278 13.0 24.0 18.5 2.1 296 chr3R 21897546 intron CG6678 + chr3R 21897694 intron CG6678 + chr3R 21897842 intron CG6678 + chr3R_41_21895001 chr3R_21895001 RAL-307_100b 3539 chr3R 21903509 21903635 chr3R 21903613 21903757 15 119 0.0 0.0 0.0 15.0 248 chr3R 21903509 intron CG6678 + chr3R 21903633 intron CG6678 + chr3R 21903757 intron CG6678 + chr3R_15_21900001 chr3R_21900001 RAL-307_100b 3540 chr3R 8339246 8339247 chr3R 21907534 21907534 9 13568287 72.0 73.0 72.5 0.1 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-307_100b 3541 chr3R 9620955 9620957 chr3R 21907534 21907534 5 12286578 53.0 73.0 63.0 0.1 12286579 chr3R 9620955 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-307_100b 3542 chr3R 21907534 21907534 chr3R 28831801 28831804 28 6924268 80.5 78.5 79.5 0.3 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_28_25365001 chr3R_25365001 RAL-307_100b 3543 chr3R 8339247 8339247 chr3R 21907535 21907535 4 13568288 72.0 74.5 73.2 0.1 13568288 chr3R 8339247 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-307_100b 3544 chr3R 21907535 21907535 chr3R 28831801 28831802 44 6924266 80.5 78.5 79.5 0.5 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_44_25365001 chr3R_25365001 RAL-307_100b 3545 chr3R 9620954 9620957 chr3R 21907536 21907536 4 12286580 53.0 75.0 64.0 0.1 12286582 chr3R 9620954 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-307_100b 3546 chr3R 21907536 21907536 chr3R 28831801 28831805 68 6924266 81.5 78.5 80.0 0.8 6924269 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831805 intron WASp - chr3R_68_25365001 chr3R_25365001 RAL-307_100b 3547 chr3R 21937204 21937234 chr3R 21937306 21937336 28 101 14.5 25.0 19.8 1.3 132 chr3R 21937204 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937336 intergenic not near genes chr3R_28_21935001 chr3R_21935001 RAL-307_100b 3548 chr3R 21989084 21989134 chr3R 21989233 21989283 9 149 11.0 0.0 5.5 1.4 199 chr3R 21989084 intron Eip93F + chr3R 21989184 intron Eip93F + chr3R 21989283 intron Eip93F + chr3R_9_21985001 chr3R_21985001 RAL-307_100b 3549 chr3R 22013043 22013082 chr3R 22013150 22013189 20 107 9.0 17.5 13.2 1.4 146 chr3R 22013043 intergenic not near genes chr3R 22013116 intergenic not near genes chr3R 22013189 intergenic not near genes chr3R_20_22010001 chr3R_22010001 RAL-307_100b 3550 chr3R 22046851 22046866 chr3R 22046968 22046980 9 119 41.5 2.5 22.0 0.4 129 chr3R 22046851 intron how + chr3R 22046916 intron how + chr3R 22046980 intron how + chr3R_9_22045001 chr3R_22045001 RAL-307_100b 3551 chr3R 22055083 22055122 chr3R 22055202 22055241 47 116 19.5 19.0 19.2 2.3 158 chr3R 22055083 intron how + chr3R 22055162 intron how + chr3R 22055241 intron how + chr3R_47_22055001 chr3R_22055001 RAL-307_100b 3552 chr3R 22087541 22087541 chr3R 22087651 22087653 5 112 31.5 4.5 18.0 0.3 112 chr3R 22087541 intron,exon CG5778 -,CG5791 + chr3R 22087597 intron,exon CG5778 -,CG5791 + chr3R 22087653 intron,3` UTR CG5778 -,CG5791 + chr3R_5_22085001 chr3R_22085001 RAL-307_100b 3553 chr3R 22087542 22087594 chr3R 22087649 22087708 24 110 7.5 4.5 6.0 3.4 166 chr3R 22087542 intron,exon CG5778 -,CG5791 + chr3R 22087625 intron,3` UTR CG5778 -,CG5791 + chr3R 22087708 intron,3` UTR CG5778 -,CG5791 + chr3R_24_22085001 chr3R_22085001 RAL-307_100b 3554 chr3R 22191477 22191527 chr3R 22191581 22191631 58 101 21.0 19.5 20.2 2.7 154 chr3R 22191477 intron SKIP + chr3R 22191554 intron SKIP + chr3R 22191631 intron SKIP + chr3R_58_22190001 chr3R_22190001 RAL-307_100b 3555 chr3R 22239466 22239524 chr3R 22248551 22248597 roo 23 9077 15.5 0.0 7.8 2.6 9131 chr3R 22239466 intron SKIP + chr3R 22244032 intron SKIP + chr3R 22248597 intron SKIP + chr3R_23_22240001 chr3R_22240001 RAL-307_100b 3556 chr3R 22428553 22428609 chr3R 22428654 22428710 57 98 14.5 13.0 13.8 3.9 157 chr3R 22428553 intron CG13847 - chr3R 22428632 intron CG13847 - chr3R 22428710 intron CG13847 - chr3R_57_22425001 chr3R_22425001 RAL-307_100b 3557 chr3R 22433069 22433079 chr3R 22433194 22433204 10 125 34.0 28.5 31.2 0.3 135 chr3R 22433069 intron CG13847 - chr3R 22433136 intron CG13847 - chr3R 22433204 intron CG13847 - chr3R_10_22430001 chr3R_22430001 RAL-307_100b 3558 chr3R 22433081 22433098 chr3R 22433191 22433223 11 124 24.5 26.5 25.5 0.4 142 chr3R 22433081 intron CG13847 - chr3R 22433152 intron CG13847 - chr3R 22433223 intron CG13847 - chr3R_11_22430001 chr3R_22430001 RAL-307_100b 3559 chr3R 22437765 22437823 chr3R 22437880 22437938 70 112 5.0 5.5 5.2 11.3 173 chr3R 22437765 intergenic not near genes chr3R 22437852 intergenic not near genes chr3R 22437938 intergenic not near genes chr3R_70_22435001 chr3R_22435001 RAL-307_100b 3560 chr3R 22450520 22450575 chr3R 22453185 22453240 NOF 43 2663 15.5 14.0 14.8 2.7 2720 chr3R 22450520 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453240 intron CG34376 + chr3R_43_22450001 chr3R_22450001 RAL-307_100b 3561 chr3R 22503844 22503903 chr3R 22503949 22503995 61 103 2.5 14.0 8.2 6.6 151 chr3R 22503844 intron Octbeta1R + chr3R 22503920 intron Octbeta1R + chr3R 22503995 intron Octbeta1R + chr3R_61_22500001 chr3R_22500001 RAL-307_100b 3562 chr3R 22520737 22520790 chr3R 22520849 22520902 49 110 12.0 14.5 13.2 3.5 165 chr3R 22520737 intron CG5346 - chr3R 22520820 intron CG5346 - chr3R 22520902 intron CG5346 - chr3R_49_22520001 chr3R_22520001 RAL-307_100b 3563 chr3R 22526276 22526330 chr3R 22526382 22526436 49 104 12.0 10.0 11.0 4.1 160 chr3R 22526276 intron CG5346 - chr3R 22526356 intron CG5346 - chr3R 22526436 intron CG5346 - chr3R_49_22525001 chr3R_22525001 RAL-307_100b 3564 chr3R 22538416 22538472 chr3R 22538526 22538582 62 105 23.0 22.0 22.5 2.6 166 chr3R 22538416 intron CG5326 - chr3R 22538499 intron CG5326 - chr3R 22538582 intron CG5326 - chr3R_62_22535001 chr3R_22535001 RAL-307_100b 3565 chr3R 22580629 22580674 chr3R 22580727 22580782 38 95 16.5 21.0 18.8 1.9 153 chr3R 22580629 intergenic CSN6 +,CG33110 + chr3R 22580706 intergenic CSN6 +,CG33110 + chr3R 22580782 5` UTR CSN6 + chr3R_38_22580001 chr3R_22580001 RAL-307_100b 3566 chr3R 22648303 22648353 chr3R 22648407 22648452 52 102 24.5 3.5 14.0 3.5 149 chr3R 22648303 intron wake + chr3R 22648378 intron wake + chr3R 22648452 intron wake + chr3R_52_22645001 chr3R_22645001 RAL-307_100b 3567 chr3R 22672276 22672332 chr3R 22672394 22672450 42 116 11.5 18.5 15.0 2.6 174 chr3R 22672276 intron wake + chr3R 22672363 intron wake + chr3R 22672450 intron wake + chr3R_42_22670001 chr3R_22670001 RAL-307_100b 3568 chr3R 22684178 22684237 chr3R 22684279 22684338 38 100 18.0 13.5 15.8 2.3 160 chr3R 22684178 intergenic not near genes chr3R 22684258 intergenic not near genes chr3R 22684338 intergenic not near genes chr3R_38_22680001 chr3R_22680001 RAL-307_100b 3569 chr3R 22794486 22794538 chr3R 22794588 22794632 59 100 13.0 0.0 6.5 7.9 146 chr3R 22794486 intergenic CG7029 + chr3R 22794559 intergenic not near genes chr3R 22794632 intergenic not near genes chr3R_59_22790001 chr3R_22790001 RAL-307_100b 3570 chr3R 22818083 22818107 chr3R 22818188 22818190 18 107 27.0 13.5 20.2 0.8 107 chr3R 22818083 intergenic not near genes chr3R 22818136 intergenic not near genes chr3R 22818190 intergenic not near genes chr3R_18_22815001 chr3R_22815001 RAL-307_100b 3571 chr3R 22818108 22818132 chr3R 22818187 22818228 28 93 12.5 12.0 12.2 2.1 120 chr3R 22818108 intergenic not near genes chr3R 22818168 intergenic not near genes chr3R 22818228 intergenic not near genes chr3R_28_22815001 chr3R_22815001 RAL-307_100b 3572 chr3R 22835795 22835820 chr3R 22835900 22835916 21 104 28.0 23.5 25.8 0.8 121 chr3R 22835795 intergenic not near genes chr3R 22835856 intergenic not near genes chr3R 22835916 intergenic not near genes chr3R_21_22835001 chr3R_22835001 RAL-307_100b 3573 chr3R 22835821 22835827 chr3R 22835898 22835934 12 100 24.0 22.5 23.2 0.5 113 chr3R 22835821 intergenic not near genes chr3R 22835878 intergenic not near genes chr3R 22835934 intergenic not near genes chr3R_12_22835001 chr3R_22835001 RAL-307_100b 3574 chr3R 22835830 22835845 chr3R 22835897 22835952 22 101 18.0 22.5 20.2 1.0 122 chr3R 22835830 intergenic not near genes chr3R 22835891 intergenic not near genes chr3R 22835952 intergenic not near genes chr3R_22_22835001 chr3R_22835001 RAL-307_100b 3575 chr3R 22836444 22836451 chr3R 22836623 22836630 7 179 43.5 20.5 32.0 0.2 186 chr3R 22836444 intergenic not near genes chr3R 22836537 intergenic not near genes chr3R 22836630 intergenic not near genes chr3R_7_22835001 chr3R_22835001 RAL-307_100b 3576 chr3R 22836456 22836501 chr3R 22836620 22836675 50 176 17.0 18.0 17.5 2.7 219 chr3R 22836456 intergenic not near genes chr3R 22836566 intergenic not near genes chr3R 22836675 intergenic not near genes chr3R_50_22835001 chr3R_22835001 RAL-307_100b 3577 chr3R 22871408 22871466 chr3R 22871532 22871590 49 121 10.5 9.0 9.8 4.5 182 chr3R 22871408 intergenic not near genes chr3R 22871499 intergenic not near genes chr3R 22871590 intergenic not near genes chr3R_49_22870001 chr3R_22870001 RAL-307_100b 3578 chr3R 22877275 22877289 chr3R 22877428 22877442 8 150 39.5 10.0 24.8 0.3 167 chr3R 22877275 intergenic not near genes chr3R 22877358 intergenic not near genes chr3R 22877442 intergenic not near genes chr3R_8_22875001 chr3R_22875001 RAL-307_100b 3579 chr3R 22877296 22877330 chr3R 22877426 22877483 27 144 12.5 9.5 11.0 2.2 187 chr3R 22877296 intergenic not near genes chr3R 22877390 intergenic not near genes chr3R 22877483 intergenic not near genes chr3R_27_22875001 chr3R_22875001 RAL-307_100b 3580 chr3R 22880577 22880609 chr3R 22880679 22880711 26 98 25.0 30.5 27.8 0.9 134 chr3R 22880577 intergenic not near genes chr3R 22880644 intergenic not near genes chr3R 22880711 intergenic not near genes chr3R_26_22880001 chr3R_22880001 RAL-307_100b 3581 chr3R 22880908 22880960 chr3R 22881071 22881123 42 161 13.0 7.0 10.0 3.8 215 chr3R 22880908 intergenic not near genes chr3R 22881016 intergenic not near genes chr3R 22881123 intergenic not near genes chr3R_42_22880001 chr3R_22880001 RAL-307_100b 3582 chr3R 22881187 22881220 chr3R 22884910 22884951 Doc 17 3727 11.5 12.5 12.0 1.3 3764 chr3R 22881187 intergenic not near genes chr3R 22883069 intergenic not near genes chr3R 22884951 intergenic not near genes chr3R_17_22880001 chr3R_22880001 RAL-307_100b 3583 chr3R 22927852 22927868 chr3R 22927972 22927978 10 118 42.0 30.0 36.0 0.3 126 chr3R 22927852 intron klg + chr3R 22927915 intron klg + chr3R 22927978 intron klg + chr3R_10_22925001 chr3R_22925001 RAL-307_100b 3584 chr3R 22927875 22927904 chr3R 22927964 22928024 30 104 17.0 28.0 22.5 1.3 149 chr3R 22927875 intron klg + chr3R 22927950 intron klg + chr3R 22928024 intron klg + chr3R_30_22925001 chr3R_22925001 RAL-307_100b 3585 chr3R 22934593 22934615 chr3R 22934691 22934722 14 103 21.0 16.0 18.5 0.7 129 chr3R 22934593 intron klg + chr3R 22934658 intron klg + chr3R 22934722 intron klg + chr3R_14_22930001 chr3R_22930001 RAL-307_100b 3586 chr3R 22934617 22934640 chr3R 22934689 22934747 23 95 14.5 13.5 14.0 1.5 130 chr3R 22934617 intron klg + chr3R 22934682 intron klg + chr3R 22934747 intron klg + chr3R_23_22930001 chr3R_22930001 RAL-307_100b 3587 chr3R 22945942 22945945 chr3R 22946047 22946050 5 105 16.5 17.5 17.0 0.3 108 chr3R 22945942 intron klg + chr3R 22945996 intron klg + chr3R 22946050 intron klg + chr3R_5_22945001 chr3R_22945001 RAL-307_100b 3588 chr3R 22949481 22949526 chr3R 22950716 22950761 49 1231 15.0 10.0 12.5 3.6 1280 chr3R 22949481 intron klg + chr3R 22950121 intron klg + chr3R 22950761 intron klg + chr3R_49_22950001 chr3R_22950001 RAL-307_100b 3589 chr3R 22977054 22977103 chr3R 22977172 22977221 37 110 11.0 17.0 14.0 2.5 167 chr3R 22977054 intergenic CG17244 + chr3R 22977138 intergenic CG17244 + chr3R 22977221 intergenic CG17244 + chr3R_37_22975001 chr3R_22975001 RAL-307_100b 3590 chr3R 23090377 23090437 chr3R 23090485 23090540 59 105 9.0 15.0 12.0 4.5 163 chr3R 23090377 intron CG13830 - chr3R 23090458 intron CG13830 - chr3R 23090540 intron CG13830 - chr3R_59_23090001 chr3R_23090001 RAL-307_100b 3591 chr3R 23091232 23091288 chr3R 23091342 23091398 61 107 17.5 13.0 15.2 3.8 166 chr3R 23091232 intron CG13830 - chr3R 23091315 intron CG13830 - chr3R 23091398 intron CG13830 - chr3R_61_23090001 chr3R_23090001 RAL-307_100b 3592 chr3R 23143771 23143826 chr3R 23144276 23144331 69 500 24.0 15.5 19.8 3.3 560 chr3R 23143771 intergenic not near genes chr3R 23144051 intergenic not near genes chr3R 23144331 intergenic not near genes chr3R_69_23140001 chr3R_23140001 RAL-307_100b 3593 chr3R 23176262 23176315 chr3R 23176858 23176911 39 590 10.5 13.0 11.8 3.0 649 chr3R 23176262 intron Irk1 + chr3R 23176586 intron Irk1 + chr3R 23176911 intron Irk1 + chr3R_39_23175001 chr3R_23175001 RAL-307_100b 3594 chr3R 23225035 23225044 chr3R 23225136 23225145 8 101 13.5 0.0 6.8 1.0 110 chr3R 23225035 intron cnc - chr3R 23225090 intron cnc - chr3R 23225145 intron cnc - chr3R_8_23225001 chr3R_23225001 RAL-307_100b 3595 chr3R 23234824 23234841 chr3R 23234926 23234943 8 102 13.0 14.5 13.8 0.5 119 chr3R 23234824 intron CG4467 - chr3R 23234884 intron CG4467 - chr3R 23234943 intron CG4467 - chr3R_8_23230001 chr3R_23230001 RAL-307_100b 3596 chr3R 23319656 23319676 chr3R 23319756 23319780 18 103 0.0 17.0 8.5 1.9 124 chr3R 23319656 intron pnt - chr3R 23319718 intron pnt - chr3R 23319780 intron pnt - chr3R_18_23315001 chr3R_23315001 RAL-307_100b 3597 chr3R 23335410 23335466 chr3R 23335513 23335569 39 100 13.5 16.0 14.8 2.5 159 chr3R 23335410 intron pnt - chr3R 23335490 intron pnt - chr3R 23335569 intron pnt - chr3R_39_23335001 chr3R_23335001 RAL-307_100b 3598 chr3R 23356973 23356980 chr3R 23357084 23357091 6 111 50.5 19.0 34.8 0.2 118 chr3R 23356973 intron Sec13 + chr3R 23357032 intron Sec13 + chr3R 23357091 intron Sec13 + chr3R_6_23355001 chr3R_23355001 RAL-307_100b 3599 chr3R 23356981 23356997 chr3R 23357083 23357108 15 109 38.5 18.5 28.5 0.5 127 chr3R 23356981 intron Sec13 + chr3R 23357044 intron Sec13 + chr3R 23357108 intron Sec13 + chr3R_15_23355001 chr3R_23355001 RAL-307_100b 3600 chr3R 23360175 23360198 chr3R 23360276 23360299 12 100 0.0 17.5 8.8 1.2 124 chr3R 23360175 3` UTR RpS3 + chr3R 23360237 intergenic RpS3 + chr3R 23360299 intergenic RpS3 + chr3R_12_23360001 chr3R_23360001 RAL-307_100b 3601 chr3R 23360200 23360206 chr3R 23360259 23360307 6 94 0.0 12.0 6.0 0.9 107 chr3R 23360200 3` UTR RpS3 + chr3R 23360254 intergenic RpS3 + chr3R 23360307 intergenic RpS3 + chr3R_6_23360001 chr3R_23360001 RAL-307_100b 3602 chr3R 23373486 23373530 chr3R 23373721 23373775 40 238 10.0 10.5 10.2 3.6 289 chr3R 23373486 exon CG42827 + chr3R 23373630 intergenic CG42827 +,CG42828 + chr3R 23373775 exon CG42828 + chr3R_40_23370001 chr3R_23370001 RAL-307_100b 3603 chr3R 23385564 23385619 chr3R 23385711 23385767 31 144 13.0 7.0 10.0 2.8 203 chr3R 23385564 intergenic not near genes chr3R 23385666 intergenic not near genes chr3R 23385767 intergenic not near genes chr3R_31_23385001 chr3R_23385001 RAL-307_100b 3604 chr3R 23390940 23390950 chr3R 23391047 23391057 8 106 16.5 0.0 8.2 0.9 117 chr3R 23390940 intergenic CR43387 + chr3R 23390998 intergenic CR43387 + chr3R 23391057 intergenic CR43387 + chr3R_8_23390001 chr3R_23390001 RAL-307_100b 3605 chr3R 23557191 23557250 chr3R 23557292 23557346 60 97 10.0 17.0 13.5 4.1 155 chr3R 23557191 intergenic beat-IV +,CG10164 - chr3R 23557268 intergenic beat-IV +,CG10164 - chr3R 23557346 intergenic beat-IV +,CG10164 - chr3R_60_23555001 chr3R_23555001 RAL-307_100b 3606 chr3R 23558374 23558429 chr3R 23560180 23560235 Bari1 42 1804 17.0 10.5 13.8 2.8 1861 chr3R 23558374 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560235 intron beat-IV + chr3R_42_23555001 chr3R_23555001 RAL-307_100b 3607 chr3R 23564415 23564475 chr3R 23564584 23564644 48 169 14.5 14.0 14.2 3.2 229 chr3R 23564415 intron beat-IV + chr3R 23564530 intron beat-IV + chr3R 23564644 intron beat-IV + chr3R_48_23560001 chr3R_23560001 RAL-307_100b 3608 chr3R 23643946 23643954 chr3R 23644051 23644059 8 104 12.5 14.0 13.2 0.6 113 chr3R 23643946 intron CG31145 - chr3R 23644002 intron CG31145 - chr3R 23644059 intron CG31145 - chr3R_8_23640001 chr3R_23640001 RAL-307_100b 3609 chr3R 23684670 23684729 chr3R 23685181 23685195 roo 59 502 19.0 22.5 20.8 2.7 525 chr3R 23684670 exon CG18754 + chr3R 23684932 intron CG18754 + chr3R 23685195 exon CG18754 + chr3R_59_23680001 chr3R_23680001 RAL-307_100b 3610 chr3R 23688449 23688506 chr3R 23688562 23688622 30 107 13.0 3.5 8.2 3.3 173 chr3R 23688449 intergenic SPE + chr3R 23688536 intergenic SPE +,CG10254 - chr3R 23688622 intergenic CG10254 -,SPE + chr3R_30_23685001 chr3R_23685001 RAL-307_100b 3611 chr3R 23826145 23826192 chr3R 23826453 23826492 8 306 11.5 14.5 13.0 0.6 347 chr3R 23826145 intron CG34355 + chr3R 23826318 intron CG34355 + chr3R 23826492 intron,5` UTR CG34355 +,snRNA:U1:95Cc + chr3R_8_23825001 chr3R_23825001 RAL-307_100b 3612 chr3R 23835384 23835433 chr3R 23844559 23844608 roo 37 9172 18.0 7.5 12.8 2.7 9224 chr3R 23835384 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844608 intron CG34355 + chr3R_37_23835001 chr3R_23835001 RAL-307_100b 3613 chr3R 23851062 23851087 chr3R 23858754 23858779 opus 19 7691 11.0 22.0 16.5 1.1 7717 chr3R 23851062 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858779 intergenic not near genes chr3R_19_23850001 chr3R_23850001 RAL-307_100b 3614 chr3R 16087065 16087066 chr3R 23867960 23868033 5 7780923 66.5 26.5 46.5 0.1 7780968 chr3R 16087065 intron,3` UTR Mhcl -,sxe2 + chr3R 19977549 intron,exon Hs6st -,CG31213 + chr3R 23868033 intron Pli - chr3R_5_19975001 chr3R_19975001 RAL-307_100b 3615 chr3R 23883082 23883103 chr3R 23883469 23883489 15 385 29.5 12.5 21.0 0.7 407 chr3R 23883082 intron Pli - chr3R 23883286 intron Pli - chr3R 23883489 intron Pli - chr3R_15_23880001 chr3R_23880001 RAL-307_100b 3616 chr3R 23883104 23883124 chr3R 23883467 23883485 21 373 20.0 11.5 15.8 1.2 381 chr3R 23883104 intron Pli - chr3R 23883294 intron Pli - chr3R 23883485 intron Pli - chr3R_21_23880001 chr3R_23880001 RAL-307_100b 3617 chr3R 23944885 23944934 chr3R 23944995 23945022 52 107 1.5 14.0 7.8 5.9 137 chr3R 23944885 intron CG12268 - chr3R 23944954 intron CG12268 - chr3R 23945022 exon CG12268 - chr3R_52_23940001 chr3R_23940001 RAL-307_100b 3618 chr3R 23949015 23949075 chr3R 23949117 23949177 63 101 12.5 12.0 12.2 4.8 162 chr3R 23949015 intergenic not near genes chr3R 23949096 intergenic not near genes chr3R 23949177 intergenic not near genes chr3R_63_23945001 chr3R_23945001 RAL-307_100b 3619 chr3R 23963402 23963439 chr3R 23963510 23963547 28 103 24.5 17.5 21.0 1.3 145 chr3R 23963402 intron CG31140 + chr3R 23963474 intron CG31140 + chr3R 23963547 intron CG31140 + chr3R_28_23960001 chr3R_23960001 RAL-307_100b 3620 chr3R 24011643 24011674 chr3R 24011751 24011782 14 107 11.5 6.0 8.8 1.4 139 chr3R 24011643 intron KrT95D - chr3R 24011712 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_14_24010001 chr3R_24010001 RAL-307_100b 3621 chr3R 24072063 24072119 chr3R 24072526 24072540 jockey 52 457 19.5 25.5 22.5 2.2 477 chr3R 24072063 intron 4EHP - chr3R 24072302 intron 4EHP - chr3R 24072540 intron 4EHP - chr3R_52_24070001 chr3R_24070001 RAL-307_100b 3622 chr3R 24076900 24076935 chr3R 24078385 24078427 hobo 24 1485 20.0 19.5 19.8 1.2 1527 chr3R 24076900 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078427 intron 4EHP - chr3R_24_24075001 chr3R_24075001 RAL-307_100b 3623 chr3R 24076936 24076948 chr3R 24078380 24078433 hobo 15 1475 14.5 17.5 16.0 0.9 1497 chr3R 24076936 intron 4EHP - chr3R 24077684 intron 4EHP - chr3R 24078433 intron 4EHP - chr3R_15_24075001 chr3R_24075001 RAL-307_100b 3624 chr3R 24116538 24116575 chr3R 24116666 24116703 47 127 11.0 22.0 16.5 2.7 165 chr3R 24116538 intron Rootletin + chr3R 24116620 intron Rootletin + chr3R 24116703 intron Rootletin + chr3R_47_24115001 chr3R_24115001 RAL-307_100b 3625 chr3R 24199713 24199770 chr3R 24199818 24199875 50 102 13.0 13.5 13.2 3.5 162 chr3R 24199713 intron twin - chr3R 24199794 intron twin - chr3R 24199875 intron twin - chr3R_50_24195001 chr3R_24195001 RAL-307_100b 3626 chr3R 24207196 24207206 chr3R 24212297 24212307 flea 7 5100 52.5 22.5 37.5 0.2 5111 chr3R 24207196 intron twin - chr3R 24209752 intron twin - chr3R 24212307 intron twin - chr3R_7_24205001 chr3R_24205001 RAL-307_100b 3627 chr3R 24207207 24207220 chr3R 24212293 24212321 flea 17 5099 46.0 19.0 32.5 0.5 5114 chr3R 24207207 intron twin - chr3R 24209764 intron twin - chr3R 24212321 intron twin - chr3R_17_24205001 chr3R_24205001 RAL-307_100b 3628 chr3R 24207222 24207229 chr3R 24212291 24212330 flea 12 5092 36.5 18.0 27.2 0.4 5108 chr3R 24207222 intron twin - chr3R 24209776 intron twin - chr3R 24212330 intron twin - chr3R_12_24205001 chr3R_24205001 RAL-307_100b 3629 chr3R 24207230 24207244 chr3R 24212290 24212335 flea 14 5091 19.5 17.5 18.5 0.7 5105 chr3R 24207230 intron twin - chr3R 24209782 intron twin - chr3R 24212335 intron twin - chr3R_14_24205001 chr3R_24205001 RAL-307_100b 3630 chr3R 24431592 24431623 chr3R 24431696 24431727 26 103 12.0 16.0 14.0 1.7 135 chr3R 24431592 intron nAChRalpha1 - chr3R 24431660 intron nAChRalpha1 - chr3R 24431727 intron nAChRalpha1 - chr3R_26_24430001 chr3R_24430001 RAL-307_100b 3631 chr3R 24434214 24434274 chr3R 24434317 24434377 46 101 14.0 11.5 12.8 3.3 163 chr3R 24434214 intron nAChRalpha1 - chr3R 24434296 intron nAChRalpha1 - chr3R 24434377 intron nAChRalpha1 - chr3R_46_24430001 chr3R_24430001 RAL-307_100b 3632 chr3R 24447707 24447756 chr3R 24447810 24447868 13 110 0.0 10.0 5.0 2.2 161 chr3R 24447707 intron nAChRalpha1 - chr3R 24447788 intron nAChRalpha1 - chr3R 24447868 intron nAChRalpha1 - chr3R_13_24445001 chr3R_24445001 RAL-307_100b 3633 chr3R 24483798 24483813 chr3R 24484147 24484150 7 345 42.5 1.5 22.0 0.3 352 chr3R 24483798 intergenic not near genes chr3R 24483974 intergenic not near genes chr3R 24484150 intergenic not near genes chr3R_7_24480001 chr3R_24480001 RAL-307_100b 3634 chr3R 24483814 24483855 chr3R 24484145 24484204 36 332 18.0 1.5 9.8 3.3 390 chr3R 24483814 intergenic not near genes chr3R 24484009 intergenic not near genes chr3R 24484204 intergenic not near genes chr3R_36_24480001 chr3R_24480001 RAL-307_100b 3635 chr3R 24493255 24493304 chr3R 24493509 24493558 BS 49 250 11.5 19.0 15.2 3.0 303 chr3R 24493255 intergenic not near genes chr3R 24493406 intergenic not near genes chr3R 24493558 intergenic not near genes chr3R_49_24490001 chr3R_24490001 RAL-307_100b 3636 chr3R 24495261 24495319 chr3R 24495365 24495423 53 101 16.5 17.0 16.8 3.0 162 chr3R 24495261 intergenic not near genes chr3R 24495342 intergenic not near genes chr3R 24495423 intergenic not near genes chr3R_53_24495001 chr3R_24495001 RAL-307_100b 3637 chr3R 2650839 2650839 chr3R 24594628 24594649 4 21943798 27.0 52.0 39.5 0.1 21943810 chr3R 2650839 intron CG41056 - chr3R 13622744 intergenic not near genes chr3R 24594649 intron mld + chr3R_4_13620001 chr3R_13620001 RAL-307_100b 3638 chr3R 24594654 24594668 chr3R 24594919 24594933 pogo 13 265 17.5 22.0 19.8 0.6 279 chr3R 24594654 intron mld + chr3R 24594794 intron mld + chr3R 24594933 intron mld + chr3R_13_24590001 chr3R_24590001 RAL-307_100b 3639 chr3R 24605547 24605557 chr3R 24605660 24605670 6 112 35.0 46.0 40.5 0.1 123 chr3R 24605547 intron mld + chr3R 24605608 intron mld + chr3R 24605670 intron mld + chr3R_6_24605001 chr3R_24605001 RAL-307_100b 3640 chr3R 24667581 24667621 chr3R 24667683 24667723 23 101 14.0 0.0 7.0 2.9 142 chr3R 24667581 intron slo + chr3R 24667652 intron slo + chr3R 24667723 intron slo + chr3R_23_24665001 chr3R_24665001 RAL-307_100b 3641 chr3R 24670029 24670199 chr3R 24670162 24670309 58 119 0.0 0.0 0.0 58.0 280 chr3R 24670029 intron slo + chr3R 24670169 intron slo + chr3R 24670309 intron slo + chr3R_58_24670001 chr3R_24670001 RAL-307_100b 3642 chr3R 24730072 24730098 chr3R 24732475 24732501 Doc 21 2402 26.5 3.5 15.0 1.3 2429 chr3R 24730072 intron tok + chr3R 24731286 intron tok + chr3R 24732501 intron tok + chr3R_21_24730001 chr3R_24730001 RAL-307_100b 3643 chr3R 24730103 24730117 chr3R 24732470 24732470 Doc 8 2378 17.5 3.5 10.5 0.7 2367 chr3R 24730103 intron tok + chr3R 24731286 intron tok + chr3R 24732470 intron tok + chr3R_8_24730001 chr3R_24730001 RAL-307_100b 3644 chr3R 24764352 24764407 chr3R 24764460 24764515 61 106 16.0 19.0 17.5 3.3 163 chr3R 24764352 intron AstA - chr3R 24764434 intron AstA - chr3R 24764515 intron AstA - chr3R_61_24760001 chr3R_24760001 RAL-307_100b 3645 chr3R 24785052 24785109 chr3R 24785153 24785180 40 95 21.5 28.5 25.0 1.5 128 chr3R 24785052 3` UTR CG5805 - chr3R 24785116 3` UTR CG5805 - chr3R 24785180 3` UTR CG5805 - chr3R_40_24785001 chr3R_24785001 RAL-307_100b 3646 chr3R 24787527 24787558 chr3R 24787628 24787659 9 101 7.0 4.0 5.5 1.4 132 chr3R 24787527 intergenic CG5805 - chr3R 24787593 intergenic CG5805 -,Ets96B + chr3R 24787659 intergenic CG5805 -,Ets96B + chr3R_9_24785001 chr3R_24785001 RAL-307_100b 3647 chr3R 24789963 24790013 chr3R 24790132 24790183 38 166 9.5 12.5 11.0 3.2 220 chr3R 24789963 intron,5` UTR Ets96B +,CG13634 - chr3R 24790073 intron,5` UTR Ets96B +,CG13634 - chr3R 24790183 intron Ets96B + chr3R_38_24790001 chr3R_24790001 RAL-307_100b 3648 chr3R 24893440 24893487 chr3R 24893545 24893582 31 104 8.5 7.0 7.8 3.5 142 chr3R 24893440 intron CG31121 - chr3R 24893511 intron CG31121 - chr3R 24893582 intron CG31121 - chr3R_31_24890001 chr3R_24890001 RAL-307_100b 3649 chr3R 24903904 24903956 chr3R 24904014 24904064 25 111 17.5 3.5 10.5 2.2 160 chr3R 24903904 intron CG13643 - chr3R 24903984 intron CG13643 - chr3R 24904064 intron CG13643 - chr3R_25_24900001 chr3R_24900001 RAL-307_100b 3650 chr3R 24912464 24912514 chr3R 24912565 24912621 29 105 12.5 14.0 13.2 2.0 157 chr3R 24912464 intergenic not near genes chr3R 24912542 intergenic CR44267 + chr3R 24912621 intergenic CR44267 + chr3R_29_24910001 chr3R_24910001 RAL-307_100b 3651 chr3R 24927115 24927128 chr3R 24931921 24931938 Doc 14 4812 35.5 15.0 25.2 0.5 4823 chr3R 24927115 intergenic Trf4-2 + chr3R 24929526 intergenic not near genes chr3R 24931938 intergenic CG11771 + chr3R_14_24925001 chr3R_24925001 RAL-307_100b 3652 chr3R 24927129 24927151 chr3R 24931919 24931956 Doc 26 4809 23.5 14.5 19.0 1.3 4827 chr3R 24927129 intergenic Trf4-2 + chr3R 24929542 intergenic not near genes chr3R 24931956 intergenic CG11771 + chr3R_26_24925001 chr3R_24925001 RAL-307_100b 3653 chr3R 24974887 24974936 chr3R 24974991 24975040 53 102 15.5 23.5 19.5 2.6 153 chr3R 24974887 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975040 intergenic not near genes chr3R_53_24970001 chr3R_24970001 RAL-307_100b 3654 chr3R 25004874 25004916 chr3R 25004982 25005024 49 107 25.5 11.5 18.5 2.5 150 chr3R 25004874 intron tnc + chr3R 25004949 intron tnc + chr3R 25005024 intron tnc + chr3R_49_25000001 chr3R_25000001 RAL-307_100b 3655 chr3R 25018234 25018259 chr3R 25018336 25018361 11 97 37.5 27.5 32.5 0.3 127 chr3R 25018234 exon tnc + chr3R 25018298 exon tnc + chr3R 25018361 exon tnc + chr3R_11_25015001 chr3R_25015001 RAL-307_100b 3656 chr3R 25018260 25018292 chr3R 25018332 25018391 42 83 19.5 25.0 22.2 1.8 131 chr3R 25018260 exon tnc + chr3R 25018326 exon tnc + chr3R 25018391 exon tnc + chr3R_42_25015001 chr3R_25015001 RAL-307_100b 3657 chr3R 25027511 25027566 chr3R 25027749 25027804 67 235 12.0 14.5 13.2 4.7 293 chr3R 25027511 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027804 intron Hr96 + chr3R_67_25025001 chr3R_25025001 RAL-307_100b 3658 chr3R 25081878 25081903 chr3R 25081984 25082019 30 111 21.5 12.0 16.8 1.7 141 chr3R 25081878 intergenic not near genes chr3R 25081948 intergenic not near genes chr3R 25082019 intergenic not near genes chr3R_30_25080001 chr3R_25080001 RAL-307_100b 3659 chr3R 25081905 25081925 chr3R 25081983 25082041 23 105 11.0 12.0 11.5 1.8 136 chr3R 25081905 intergenic not near genes chr3R 25081973 intergenic not near genes chr3R 25082041 intergenic not near genes chr3R_23_25080001 chr3R_25080001 RAL-307_100b 3660 chr3R 25086038 25086044 chr3R 25086134 25086145 4 98 35.0 14.0 24.5 0.2 107 chr3R 25086038 intergenic not near genes chr3R 25086092 intergenic not near genes chr3R 25086145 intergenic not near genes chr3R_4_25085001 chr3R_25085001 RAL-307_100b 3661 chr3R 25088075 25088078 chr3R 25088169 25088183 6 101 0.0 32.5 16.2 0.3 108 chr3R 25088075 intergenic not near genes chr3R 25088129 intergenic not near genes chr3R 25088183 intergenic not near genes chr3R_6_25085001 chr3R_25085001 RAL-307_100b 3662 chr3R 25097083 25097092 chr3R 25097235 25097244 11 152 0.0 10.0 5.0 1.8 161 chr3R 25097083 intergenic not near genes chr3R 25097164 intergenic not near genes chr3R 25097244 intergenic CG33095 +,CG33096 + chr3R_11_25095001 chr3R_25095001 RAL-307_100b 3663 chr3R 25136372 25136428 chr3R 25136477 25136533 35 104 11.5 6.5 9.0 3.5 161 chr3R 25136372 3` UTR Bili + chr3R 25136452 3` UTR Bili + chr3R 25136533 3` UTR Bili + chr3R_35_25135001 chr3R_25135001 RAL-307_100b 3664 chr3R 25166336 25166393 chr3R 25166437 25166494 44 101 10.5 10.5 10.5 3.8 158 chr3R 25166336 intergenic not near genes chr3R 25166415 intergenic not near genes chr3R 25166494 intergenic not near genes chr3R_44_25165001 chr3R_25165001 RAL-307_100b 3665 chr3R 25302653 25302708 chr3R 25302927 25302982 70 270 11.0 14.5 12.8 5.1 329 chr3R 25302653 exon CG31370 + chr3R 25302818 exon CG31370 + chr3R 25302982 exon CG31370 + chr3R_70_25300001 chr3R_25300001 RAL-307_100b 3666 chr3R 25368448 25368499 chr3R 25368591 25368625 28 141 20.5 0.0 10.2 2.5 177 chr3R 25368448 intron Fur1 - chr3R 25368536 intron Fur1 - chr3R 25368625 intron Fur1 - chr3R_28_25365001 chr3R_25365001 RAL-307_100b 3667 chr3R 25514411 25514450 chr3R 25514517 25514531 32 104 0.0 13.5 6.8 4.1 120 chr3R 25514411 intergenic not near genes chr3R 25514471 intergenic not near genes chr3R 25514531 intergenic not near genes chr3R_32_25510001 chr3R_25510001 RAL-307_100b 3668 chr3R 25520965 25520991 chr3R 25521089 25521100 25 122 27.0 23.0 25.0 1.0 135 chr3R 25520965 intron msi + chr3R 25521032 intron msi + chr3R 25521100 intron msi + chr3R_25_25520001 chr3R_25520001 RAL-307_100b 3669 chr3R 25528013 25528041 chr3R 25528141 25528169 25 126 40.5 23.5 32.0 0.8 156 chr3R 25528013 intron msi + chr3R 25528091 intron msi + chr3R 25528169 intron msi + chr3R_25_25525001 chr3R_25525001 RAL-307_100b 3670 chr3R 25689101 25689161 chr3R 25689234 25689271 55 131 14.5 15.0 14.8 3.5 170 chr3R 25689101 intergenic not near genes chr3R 25689186 intergenic not near genes chr3R 25689271 intergenic not near genes chr3R_55_25685001 chr3R_25685001 RAL-307_100b 3671 chr3R 25725806 25725860 chr3R 25734991 25735039 roo 47 9184 12.5 17.0 14.8 3.0 9233 chr3R 25725806 intron LpR2 - chr3R 25730422 intron LpR2 - chr3R 25735039 intron LpR2 - chr3R_47_25730001 chr3R_25730001 RAL-307_100b 3672 chr3R 25736231 25736238 chr3R 25736345 25736352 10 114 30.5 19.5 25.0 0.4 121 chr3R 25736231 intron LpR2 - chr3R 25736292 intron LpR2 - chr3R 25736352 intron LpR2 - chr3R_10_25735001 chr3R_25735001 RAL-307_100b 3673 chr3R 25736239 25736287 chr3R 25736342 25736401 47 110 12.5 16.0 14.2 3.1 162 chr3R 25736239 intron LpR2 - chr3R 25736320 intron LpR2 - chr3R 25736401 intron LpR2 - chr3R_47_25735001 chr3R_25735001 RAL-307_100b 3674 chr3R 25756727 25756748 chr3R 25756838 25756848 13 110 33.5 17.0 25.2 0.5 121 chr3R 25756727 intron LpR1 - chr3R 25756788 intron LpR1 - chr3R 25756848 intron LpR1 - chr3R_13_25755001 chr3R_25755001 RAL-307_100b 3675 chr3R 25832672 25832678 chr3R 25841879 25841885 roo 6 9207 35.5 23.0 29.2 0.2 9213 chr3R 25832672 exon alpha4GT2 + chr3R 25837278 intron alpha4GT2 + chr3R 25841885 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-307_100b 3676 chr3R 25832684 25832721 chr3R 25841876 25841896 roo 44 9201 15.0 21.0 18.0 2.3 9212 chr3R 25832684 exon alpha4GT2 + chr3R 25837290 intron alpha4GT2 + chr3R 25841896 exon alpha4GT2 + chr3R_44_25835001 chr3R_25835001 RAL-307_100b 3677 chr3R 25847662 25847722 chr3R 25847784 25847843 57 118 15.0 15.0 15.0 3.6 181 chr3R 25847662 intergenic CR45656 -,CR45657 + chr3R 25847752 intergenic CR45656 -,CR45657 + chr3R 25847843 intergenic CR45656 -,CR45657 + chr3R_57_25845001 chr3R_25845001 RAL-307_100b 3678 chr3R 25863919 25863977 chr3R 25864032 25864090 36 112 10.0 9.5 9.8 3.3 171 chr3R 25863919 intron CG5890 + chr3R 25864004 intron CG5890 + chr3R 25864090 intron CG5890 + chr3R_36_25860001 chr3R_25860001 RAL-307_100b 3679 chr3R 25871073 25871128 chr3R 25871233 25871288 47 157 15.5 13.0 14.2 3.1 215 chr3R 25871073 3` UTR CG5890 + chr3R 25871180 3` UTR CG5890 + chr3R 25871288 3` UTR CG5890 + chr3R_47_25870001 chr3R_25870001 RAL-307_100b 3680 chr3R 25905614 25905657 chr3R 25905742 25905785 32 127 11.5 7.0 9.2 3.1 171 chr3R 25905614 intron CR43259 - chr3R 25905700 intron CR43259 - chr3R 25905785 intron CR43259 - chr3R_32_25905001 chr3R_25905001 RAL-307_100b 3681 chr3R 25982052 25982109 chr3R 25982165 25982220 41 110 10.0 8.0 9.0 4.1 168 chr3R 25982052 3` UTR CG42261 + chr3R 25982136 3` UTR CG42261 + chr3R 25982220 3` UTR CG42261 + chr3R_41_25980001 chr3R_25980001 RAL-307_100b 3682 chr3R 25983671 25983723 chr3R 25983794 25983844 50 119 15.0 21.5 18.2 2.6 173 chr3R 25983671 exon Nf1 + chr3R 25983758 intron Nf1 + chr3R 25983844 exon Nf1 + chr3R_50_25980001 chr3R_25980001 RAL-307_100b 3683 chr3R 25997245 25997268 chr3R 25997357 25997380 13 111 19.5 15.5 17.5 0.7 135 chr3R 25997245 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997312 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R 25997380 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_13_25995001 chr3R_25995001 RAL-307_100b 3684 chr3R 26018664 26018687 chr3R 26018777 26018790 14 110 36.5 13.0 24.8 0.5 126 chr3R 26018664 3` UTR CR43643 - chr3R 26018727 3` UTR CR43643 - chr3R 26018790 3` UTR CR43643 - chr3R_14_26015001 chr3R_26015001 RAL-307_100b 3685 chr3R 26038338 26038397 chr3R 26038449 26038507 34 110 6.5 6.0 6.2 4.7 169 chr3R 26038338 intergenic E(spl)m7-HLH + chr3R 26038422 intergenic E(spl)m7-HLH + chr3R 26038507 intergenic E(spl)m7-HLH + chr3R_34_26035001 chr3R_26035001 RAL-307_100b 3686 chr3R 26038948 26038999 chr3R 26039110 26039161 33 160 12.5 12.0 12.2 2.5 213 chr3R 26038948 intergenic not near genes chr3R 26039054 intergenic not near genes chr3R 26039161 intergenic not near genes chr3R_33_26035001 chr3R_26035001 RAL-307_100b 3687 chr3R 26093824 26093875 chr3R 26093923 26093948 56 98 16.0 16.0 16.0 3.3 124 chr3R 26093824 intron dys - chr3R 26093886 intron dys - chr3R 26093948 intron dys - chr3R_56_26090001 chr3R_26090001 RAL-307_100b 3688 chr3R 26122438 26122480 chr3R 26122537 26122581 27 98 2.0 21.5 11.8 2.1 143 chr3R 26122438 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122581 intron CG31324 + chr3R_27_26120001 chr3R_26120001 RAL-307_100b 3689 chr3R 26131644 26131695 chr3R 26131777 26131828 43 131 8.5 24.0 16.2 2.5 184 chr3R 26131644 intergenic not near genes chr3R 26131736 intergenic not near genes chr3R 26131828 intergenic not near genes chr3R_43_26130001 chr3R_26130001 RAL-307_100b 3690 chr3R 26166613 26166671 chr3R 26166731 26166789 47 115 12.5 16.5 14.5 3.0 176 chr3R 26166613 intergenic not near genes chr3R 26166701 intergenic not near genes chr3R 26166789 intergenic not near genes chr3R_47_26165001 chr3R_26165001 RAL-307_100b 3691 chr3R 26239803 26239857 chr3R 26240139 26240193 39 334 10.5 10.5 10.5 3.4 390 chr3R 26239803 intron CR42745 + chr3R 26239998 intron CR42745 + chr3R 26240193 intron CR42745 + chr3R_39_26235001 chr3R_26235001 RAL-307_100b 3692 chr3R 26277339 26277346 chr3R 26277485 26277492 4 145 23.0 13.0 18.0 0.2 153 chr3R 26277339 intergenic CG6154 + chr3R 26277416 intergenic CG6154 + chr3R 26277492 intergenic CG6154 + chr3R_4_26275001 chr3R_26275001 RAL-307_100b 3693 chr3R 26277348 26277380 chr3R 26277482 26277526 28 142 6.0 11.0 8.5 2.9 178 chr3R 26277348 intergenic CG6154 + chr3R 26277437 intergenic CG6154 + chr3R 26277526 intergenic CG6154 + chr3R_28_26275001 chr3R_26275001 RAL-307_100b 3694 chr3R 26292083 26292090 chr3R 26292188 26292195 8 105 38.0 14.5 26.2 0.3 112 chr3R 26292083 intergenic not near genes chr3R 26292139 intergenic not near genes chr3R 26292195 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-307_100b 3695 chr3R 26292091 26292134 chr3R 26292185 26292239 30 101 14.5 14.5 14.5 1.9 148 chr3R 26292091 intergenic not near genes chr3R 26292165 intergenic not near genes chr3R 26292239 intergenic not near genes chr3R_30_26290001 chr3R_26290001 RAL-307_100b 3696 chr3R 26317387 26317438 chr3R 26317495 26317546 49 102 16.5 10.0 13.2 3.5 159 chr3R 26317387 intergenic not near genes chr3R 26317466 intergenic not near genes chr3R 26317546 intergenic not near genes chr3R_49_26315001 chr3R_26315001 RAL-307_100b 3697 chr3R 26332872 26332877 chr3R 26332980 26332991 6 112 27.0 15.0 21.0 0.3 119 chr3R 26332872 intron CG33970 + chr3R 26332932 intron CG33970 + chr3R 26332991 intron CG33970 + chr3R_6_26330001 chr3R_26330001 RAL-307_100b 3698 chr3R 26332878 26332915 chr3R 26332972 26333029 50 110 10.5 14.0 12.2 3.8 151 chr3R 26332878 intron CG33970 + chr3R 26332954 intron CG33970 + chr3R 26333029 intron CG33970 + chr3R_50_26330001 chr3R_26330001 RAL-307_100b 3699 chr3R 26349242 26349265 chr3R 26349363 26349385 9 120 15.5 0.0 7.8 1.0 143 chr3R 26349242 intron CG33970 + chr3R 26349314 intron CG33970 + chr3R 26349385 intron CG33970 + chr3R_9_26345001 chr3R_26345001 RAL-307_100b 3700 chr3R 26365088 26365144 chr3R 26365198 26365253 31 108 9.0 7.0 8.0 3.4 165 chr3R 26365088 intergenic not near genes chr3R 26365170 intergenic not near genes chr3R 26365253 intergenic not near genes chr3R_31_26365001 chr3R_26365001 RAL-307_100b 3701 chr3R 26376303 26376355 chr3R 26385488 26385524 roo 51 9182 17.5 2.5 10.0 4.6 9221 chr3R 26376303 intergenic not near genes chr3R 26380914 intergenic not near genes chr3R 26385524 intergenic not near genes chr3R_51_26380001 chr3R_26380001 RAL-307_100b 3702 chr3R 26387291 26387347 chr3R 26387393 26387406 56 94 18.0 18.0 18.0 2.9 115 chr3R 26387291 intergenic not near genes chr3R 26387348 intergenic not near genes chr3R 26387406 intergenic not near genes chr3R_56_26385001 chr3R_26385001 RAL-307_100b 3703 chr3R 26405895 26405938 chr3R 26405996 26406034 27 99 9.0 9.5 9.2 2.6 139 chr3R 26405895 intergenic not near genes chr3R 26405964 intergenic not near genes chr3R 26406034 intergenic not near genes chr3R_27_26405001 chr3R_26405001 RAL-307_100b 3704 chr3R 26458187 26458229 chr3R 26458297 26458339 25 104 20.0 13.5 16.8 1.4 152 chr3R 26458187 intergenic CG14238 + chr3R 26458263 5` UTR CG14238 + chr3R 26458339 5` UTR CG14238 + chr3R_25_26455001 chr3R_26455001 RAL-307_100b 3705 chr3R 26462779 26462801 chr3R 26463033 26463055 14 254 15.0 9.5 12.2 1.1 276 chr3R 26462779 intron CG5455 + chr3R 26462917 intron CG5455 + chr3R 26463055 intron CG5455 + chr3R_14_26460001 chr3R_26460001 RAL-307_100b 3706 chr3R 26489107 26489166 chr3R 26489212 26489249 53 93 17.5 17.5 17.5 2.9 142 chr3R 26489107 intron plum - chr3R 26489178 intron plum - chr3R 26489249 intron plum - chr3R_53_26485001 chr3R_26485001 RAL-307_100b 3707 chr3R 26510475 26510523 chr3R 26519561 26519609 roo 16 9081 0.0 11.0 5.5 2.5 9134 chr3R 26510475 intron plum - chr3R 26515042 intron plum - chr3R 26519609 intron,5` UTR plum -,CR45226 + chr3R_16_26515001 chr3R_26515001 RAL-307_100b 3708 chr3R 26558303 26558360 chr3R 26565639 26565686 Stalker4 45 7329 17.0 12.0 14.5 2.9 7383 chr3R 26558303 intron scrib + chr3R 26561994 intron scrib + chr3R 26565686 intron scrib + chr3R_45_26560001 chr3R_26560001 RAL-307_100b 3709 chr3R 26641611 26641662 chr3R 26641723 26641772 52 106 17.5 12.5 15.0 3.2 161 chr3R 26641611 intergenic not near genes chr3R 26641692 intergenic not near genes chr3R 26641772 intergenic not near genes chr3R_52_26640001 chr3R_26640001 RAL-307_100b 3710 chr3R 26642708 26642762 chr3R 26643126 26643174 jockey 42 415 20.5 17.5 19.0 2.1 466 chr3R 26642708 intergenic not near genes chr3R 26642941 intergenic not near genes chr3R 26643174 intergenic not near genes chr3R_42_26640001 chr3R_26640001 RAL-307_100b 3711 chr3R 26740266 26740323 chr3R 26740366 26740424 45 98 16.0 17.5 16.8 2.5 158 chr3R 26740266 intergenic not near genes chr3R 26740345 intergenic not near genes chr3R 26740424 intergenic not near genes chr3R_45_26740001 chr3R_26740001 RAL-307_100b 3712 chr3R 26755682 26755693 chr3R 26755783 26755794 5 101 27.0 15.5 21.2 0.2 112 chr3R 26755682 intergenic not near genes chr3R 26755738 intergenic not near genes chr3R 26755794 intergenic not near genes chr3R_5_26755001 chr3R_26755001 RAL-307_100b 3713 chr3R 26755694 26755718 chr3R 26755773 26755803 10 90 21.5 13.0 17.2 0.5 109 chr3R 26755694 intergenic not near genes chr3R 26755748 intergenic not near genes chr3R 26755803 intergenic not near genes chr3R_10_26755001 chr3R_26755001 RAL-307_100b 3714 chr3R 26755720 26755727 chr3R 26755770 26755811 7 71 18.0 16.0 17.0 0.4 91 chr3R 26755720 intergenic not near genes chr3R 26755766 intergenic not near genes chr3R 26755811 intergenic not near genes chr3R_7_26755001 chr3R_26755001 RAL-307_100b 3715 chr3R 26810526 26810586 chr3R 26811036 26811051 roo 37 506 13.0 18.5 15.8 2.2 525 chr3R 26810526 intron Tl + chr3R 26810788 intron Tl + chr3R 26811051 intron Tl + chr3R_37_26810001 chr3R_26810001 RAL-307_100b 3716 chr3R 27007382 27007392 chr3R 27016542 27016547 roo 10 9158 37.5 19.5 28.5 0.3 9165 chr3R 27007382 intron RYa-R + chr3R 27011964 intron RYa-R + chr3R 27016547 intron RYa-R + chr3R_10_27010001 chr3R_27010001 RAL-307_100b 3717 chr3R 27007395 27007437 chr3R 27016541 27016582 roo 33 9148 15.0 18.5 16.8 1.9 9187 chr3R 27007395 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016582 intron RYa-R + chr3R_33_27010001 chr3R_27010001 RAL-307_100b 3718 chr3R 27019484 27019543 chr3R 27019605 27019611 61 117 13.5 16.0 14.8 3.9 127 chr3R 27019484 intron,exon RYa-R +,CG17191 - chr3R 27019548 intron,exon RYa-R +,CG17191 - chr3R 27019611 intron,exon RYa-R +,CG17191 - chr3R_61_27015001 chr3R_27015001 RAL-307_100b 3719 chr3R 27024222 27024282 chr3R 27024334 27024394 40 109 11.0 11.0 11.0 3.3 172 chr3R 27024222 intron RYa-R + chr3R 27024308 intron RYa-R + chr3R 27024394 intron RYa-R + chr3R_40_27020001 chr3R_27020001 RAL-307_100b 3720 chr3R 27027655 27027720 chr3R 27027764 27027826 27 108 7.5 10.5 9.0 2.7 171 chr3R 27027655 intron RYa-R + chr3R 27027740 intron RYa-R + chr3R 27027826 intron RYa-R + chr3R_27_27025001 chr3R_27025001 RAL-307_100b 3721 chr3R 27028698 27028756 chr3R 27028802 27028860 42 100 11.5 13.0 12.2 3.2 162 chr3R 27028698 intron RYa-R + chr3R 27028779 intron RYa-R + chr3R 27028860 intron RYa-R + chr3R_42_27025001 chr3R_27025001 RAL-307_100b 3722 chr3R 27030196 27030251 chr3R 27030350 27030390 43 150 12.0 0.0 6.0 6.1 194 chr3R 27030196 intron RYa-R + chr3R 27030293 intron RYa-R + chr3R 27030390 intron RYa-R + chr3R_43_27030001 chr3R_27030001 RAL-307_100b 3723 chr3R 27034748 27034807 chr3R 27034857 27034916 60 105 12.0 13.5 12.8 4.3 168 chr3R 27034748 intron RYa-R + chr3R 27034832 intron RYa-R + chr3R 27034916 intron RYa-R + chr3R_60_27030001 chr3R_27030001 RAL-307_100b 3724 chr3R 27071385 27071413 chr3R 27071726 27071754 24 338 27.0 18.0 22.5 1.0 369 chr3R 27071385 intergenic not near genes chr3R 27071570 intergenic not near genes chr3R 27071754 intergenic not near genes chr3R_24_27070001 chr3R_27070001 RAL-307_100b 3725 chr3R 27071415 27071443 chr3R 27071725 27071784 31 335 10.0 17.0 13.5 2.1 369 chr3R 27071415 intergenic not near genes chr3R 27071600 intergenic not near genes chr3R 27071784 intergenic not near genes chr3R_31_27070001 chr3R_27070001 RAL-307_100b 3726 chr3R 27101525 27101564 chr3R 27101656 27101695 38 129 14.5 16.0 15.2 2.3 170 chr3R 27101525 exon CG17189 + chr3R 27101610 intron CG17189 + chr3R 27101695 exon CG17189 + chr3R_38_27100001 chr3R_27100001 RAL-307_100b 3727 chr3R 27140489 27140501 chr3R 27148124 27148136 412 12 7633 40.0 15.5 27.8 0.4 7647 chr3R 27140489 intron CG6051 - chr3R 27144312 intron CG6051 - chr3R 27148136 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-307_100b 3728 chr3R 27140503 27140545 chr3R 27148123 27148180 412 51 7632 15.0 15.0 15.0 3.2 7677 chr3R 27140503 intron CG6051 - chr3R 27144342 intron CG6051 - chr3R 27148180 intron CG6051 - chr3R_51_27140001 chr3R_27140001 RAL-307_100b 3729 chr3R 27221223 27221258 chr3R 27221338 27221373 25 114 13.5 13.5 13.5 1.7 150 chr3R 27221223 intergenic not near genes chr3R 27221298 intergenic not near genes chr3R 27221373 intergenic not near genes chr3R_25_27220001 chr3R_27220001 RAL-307_100b 3730 chr3R 27299705 27299733 chr3R 27299812 27299822 25 102 17.0 28.5 22.8 1.1 117 chr3R 27299705 intron CG3339 - chr3R 27299764 intron CG3339 - chr3R 27299822 intron CG3339 - chr3R_25_27295001 chr3R_27295001 RAL-307_100b 3731 chr3R 27300834 27300877 chr3R 27300951 27300994 42 113 13.5 13.5 13.5 2.9 160 chr3R 27300834 intron CG3339 - chr3R 27300914 intron CG3339 - chr3R 27300994 intron CG3339 - chr3R_42_27300001 chr3R_27300001 RAL-307_100b 3732 chr3R 27303525 27303582 chr3R 27303636 27303685 23 106 9.0 0.0 4.5 4.2 160 chr3R 27303525 intron CG3339 - chr3R 27303605 intron CG3339 - chr3R 27303685 intron CG3339 - chr3R_23_27300001 chr3R_27300001 RAL-307_100b 3733 chr3R 13073380 13073406 chr3R 27313150 27313150 8 14239757 32.5 72.5 52.5 0.1 14239770 chr3R 13073380 intron sim + chr3R 20193265 intergenic not near genes chr3R 27313150 intron CG3339 - chr3R_8_20190001 chr3R_20190001 RAL-307_100b 3734 chr3R 27327402 27327458 chr3R 27327506 27327562 61 98 10.5 13.0 11.8 4.8 160 chr3R 27327402 intergenic not near genes chr3R 27327482 intergenic not near genes chr3R 27327562 intergenic not near genes chr3R_61_27325001 chr3R_27325001 RAL-307_100b 3735 chr3R 27329449 27329502 chr3R 27329551 27329604 36 101 9.0 10.0 9.5 3.4 155 chr3R 27329449 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329604 intergenic CG3330 - chr3R_36_27325001 chr3R_27325001 RAL-307_100b 3736 chr3R 27335922 27335963 chr3R 27336028 27336069 40 103 14.0 0.5 7.2 4.9 147 chr3R 27335922 intergenic not near genes chr3R 27335996 intergenic not near genes chr3R 27336069 intergenic not near genes chr3R_40_27335001 chr3R_27335001 RAL-307_100b 3737 chr3R 27342771 27342776 chr3R 27351377 27351382 Tirant 8 8606 47.5 18.0 32.8 0.2 8611 chr3R 27342771 intron CG42534 + chr3R 27347076 intron CG42534 + chr3R 27351382 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-307_100b 3738 chr3R 27342777 27342787 chr3R 27351375 27351392 Tirant 8 8602 41.0 17.5 29.2 0.3 8615 chr3R 27342777 intron CG42534 + chr3R 27347084 intron CG42534 + chr3R 27351392 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-307_100b 3739 chr3R 27342789 27342826 chr3R 27351373 27351432 Tirant 35 8602 21.0 16.0 18.5 1.8 8643 chr3R 27342789 intron CG42534 + chr3R 27347110 intron CG42534 + chr3R 27351432 intron CG42534 + chr3R_35_27345001 chr3R_27345001 RAL-307_100b 3740 chr3R 27426159 27426172 chr3R 27426261 27426274 10 102 4.5 34.0 19.2 0.5 115 chr3R 27426159 intron side - chr3R 27426216 intron side - chr3R 27426274 intron side - chr3R_10_27425001 chr3R_27425001 RAL-307_100b 3741 chr3R 27426173 27426178 chr3R 27426260 27426268 4 95 4.5 34.0 19.2 0.2 95 chr3R 27426173 intron side - chr3R 27426220 intron side - chr3R 27426268 intron side - chr3R_4_27425001 chr3R_27425001 RAL-307_100b 3742 chr3R 27443374 27443421 chr3R 27443476 27443523 33 102 10.0 9.0 9.5 3.1 149 chr3R 27443374 intergenic not near genes chr3R 27443448 intergenic not near genes chr3R 27443523 intergenic not near genes chr3R_33_27440001 chr3R_27440001 RAL-307_100b 3743 chr3R 27456564 27456571 chr3R 27456689 27456696 9 124 48.0 15.5 31.8 0.3 132 chr3R 27456564 intergenic not near genes chr3R 27456630 intergenic not near genes chr3R 27456696 intergenic not near genes chr3R_9_27455001 chr3R_27455001 RAL-307_100b 3744 chr3R 27456572 27456619 chr3R 27456688 27456739 54 119 20.0 14.0 17.0 3.0 167 chr3R 27456572 intergenic not near genes chr3R 27456656 intergenic not near genes chr3R 27456739 intergenic not near genes chr3R_54_27455001 chr3R_27455001 RAL-307_100b 3745 chr3R 27467017 27467077 chr3R 27467141 27467201 50 121 9.0 11.0 10.0 4.5 184 chr3R 27467017 3` UTR CG13978 + chr3R 27467109 intergenic CG13978 + chr3R 27467201 intergenic CG13978 + chr3R_50_27465001 chr3R_27465001 RAL-307_100b 3746 chr3R 27486826 27486869 chr3R 27486941 27486993 9 118 0.0 7.5 3.8 1.9 167 chr3R 27486826 intergenic not near genes chr3R 27486910 intergenic not near genes chr3R 27486993 intergenic not near genes chr3R_9_27485001 chr3R_27485001 RAL-307_100b 3747 chr3R 27496566 27496627 chr3R 27496696 27496737 36 124 12.5 19.0 15.8 2.1 171 chr3R 27496566 intergenic not near genes chr3R 27496652 intergenic not near genes chr3R 27496737 intergenic not near genes chr3R_36_27495001 chr3R_27495001 RAL-307_100b 3748 chr3R 27521143 27521151 chr3R 27530377 27530385 roo 5 9234 23.5 13.5 18.5 0.3 9242 chr3R 27521143 intron CG12885 + chr3R 27525764 intron CG12885 + chr3R 27530385 intron CG12885 + chr3R_5_27525001 chr3R_27525001 RAL-307_100b 3749 chr3R 27521154 27521186 chr3R 27530368 27530390 roo 19 9230 11.0 8.5 9.8 1.8 9236 chr3R 27521154 intron CG12885 + chr3R 27525772 intron CG12885 + chr3R 27530390 intron CG12885 + chr3R_19_27525001 chr3R_27525001 RAL-307_100b 3750 chr3R 27570241 27570300 chr3R 27570351 27570410 51 101 13.5 16.5 15.0 3.2 169 chr3R 27570241 intron wdb - chr3R 27570326 intron wdb - chr3R 27570410 intron wdb - chr3R_51_27570001 chr3R_27570001 RAL-307_100b 3751 chr3R 27574079 27574112 chr3R 27574503 27574536 36 422 30.5 8.5 19.5 1.8 457 chr3R 27574079 intron wdb - chr3R 27574308 intron wdb - chr3R 27574536 intron wdb - chr3R_36_27570001 chr3R_27570001 RAL-307_100b 3752 chr3R 27574113 27574136 chr3R 27574502 27574560 20 414 16.0 8.0 12.0 1.5 447 chr3R 27574113 intron wdb - chr3R 27574336 intron wdb - chr3R 27574560 intron wdb - chr3R_20_27570001 chr3R_27570001 RAL-307_100b 3753 chr3R 27594711 27594753 chr3R 27594821 27594862 18 108 22.0 7.0 14.5 1.2 151 chr3R 27594711 intron CG5639 - chr3R 27594786 intron CG5639 - chr3R 27594862 intron CG5639 - chr3R_18_27590001 chr3R_27590001 RAL-307_100b 3754 chr3R 27594754 27594765 chr3R 27594819 27594861 7 101 16.0 6.0 11.0 0.6 107 chr3R 27594754 intron CG5639 - chr3R 27594808 intron CG5639 - chr3R 27594861 intron CG5639 - chr3R_7_27590001 chr3R_27590001 RAL-307_100b 3755 chr3R 27613307 27613315 chr3R 27613409 27613419 10 103 35.0 36.5 35.8 0.3 112 chr3R 27613307 intron Tusp + chr3R 27613363 intron Tusp + chr3R 27613419 intron Tusp + chr3R_10_27610001 chr3R_27610001 RAL-307_100b 3756 chr3R 27613316 27613334 chr3R 27613408 27613437 19 100 22.0 36.5 29.2 0.6 121 chr3R 27613316 intron Tusp + chr3R 27613376 intron Tusp + chr3R 27613437 intron Tusp + chr3R_19_27610001 chr3R_27610001 RAL-307_100b 3757 chr3R 27648566 27648609 chr3R 27648674 27648686 11 97 26.5 1.5 14.0 0.7 120 chr3R 27648566 intron tau - chr3R 27648626 intron tau - chr3R 27648686 intron tau - chr3R_11_27645001 chr3R_27645001 RAL-307_100b 3758 chr3R 27648619 27648870 chr3R 27648671 27648924 45 94 17.5 1.5 9.5 4.3 305 chr3R 27648619 intron tau - chr3R 27648772 intron tau - chr3R 27648924 intron tau - chr3R_45_27645001 chr3R_27645001 RAL-307_100b 3759 chr3R 27706753 27706772 chr3R 27706855 27706874 13 101 33.5 13.5 23.5 0.5 121 chr3R 27706753 intergenic CG12428 -,CG12877 + chr3R 27706814 intergenic CG12428 -,CG12877 + chr3R 27706874 intergenic CG12428 -,CG12877 + chr3R_13_27705001 chr3R_27705001 RAL-307_100b 3760 chr3R 27706774 27706805 chr3R 27706851 27706892 27 96 15.5 12.0 13.8 1.8 118 chr3R 27706774 intergenic CG12428 -,CG12877 + chr3R 27706833 intergenic CG12428 -,CG12877 + chr3R 27706892 intergenic CG12428 -,CG12877 + chr3R_27_27705001 chr3R_27705001 RAL-307_100b 3761 chr3R 27725544 27725590 chr3R 27731011 27731057 I-element 38 5465 22.5 21.5 22.0 1.7 5513 chr3R 27725544 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731057 intergenic not near genes chr3R_38_27725001 chr3R_27725001 RAL-307_100b 3762 chr3R 27779243 27779287 chr3R 27779348 27779392 44 100 13.5 20.0 16.8 2.5 149 chr3R 27779243 exon CG34353 - chr3R 27779318 intron CG34353 - chr3R 27779392 intron CG34353 - chr3R_44_27775001 chr3R_27775001 RAL-307_100b 3763 chr3R 27791621 27791632 chr3R 27794794 27794807 Rt1c 9 3172 39.0 31.0 35.0 0.2 3186 chr3R 27791621 intron CG34353 - chr3R 27793214 intron CG34353 - chr3R 27794807 intron CG34353 - chr3R_9_27790001 chr3R_27790001 RAL-307_100b 3764 chr3R 27791633 27791647 chr3R 27794792 27794821 Rt1c 25 3171 33.0 30.5 31.8 0.8 3188 chr3R 27791633 intron CG34353 - chr3R 27793227 intron CG34353 - chr3R 27794821 intron CG34353 - chr3R_25_27790001 chr3R_27790001 RAL-307_100b 3765 chr3R 27799725 27799778 chr3R 27800128 27800181 48 399 19.5 14.0 16.8 2.7 456 chr3R 27799725 intron CG34353 - chr3R 27799953 intron CG34353 - chr3R 27800181 intron CG34353 - chr3R_48_27795001 chr3R_27795001 RAL-307_100b 3766 chr3R 27840252 27840268 chr3R 27840374 27840426 15 155 0.0 0.0 0.0 15.0 174 chr3R 27840252 intron CG34353 - chr3R 27840339 intron CG34353 - chr3R 27840426 intron CG34353 - chr3R_15_27840001 chr3R_27840001 RAL-307_100b 3767 chr3R 27856735 27856792 chr3R 27858243 27858273 hopper2 52 1505 19.5 19.5 19.5 2.5 1538 chr3R 27856735 intron CG34353 - chr3R 27857504 intron CG34353 - chr3R 27858273 intron CG34353 - chr3R_52_27855001 chr3R_27855001 RAL-307_100b 3768 chr3R 27862931 27862984 chr3R 27868261 27868285 Transpac 40 5322 13.5 20.0 16.8 2.2 5354 chr3R 27862931 intron CG34353 - chr3R 27865608 intron CG34353 - chr3R 27868285 intron CG34353 - chr3R_40_27865001 chr3R_27865001 RAL-307_100b 3769 chr3R 27875674 27875731 chr3R 27882754 27882785 297 50 7074 13.5 18.0 15.8 3.0 7111 chr3R 27875674 intron CG34353 - chr3R 27879230 intron CG34353 - chr3R 27882785 intron CG34353 - chr3R_50_27875001 chr3R_27875001 RAL-307_100b 3770 chr3R 27892747 27892752 chr3R 27892865 27892875 5 121 8.0 42.0 25.0 0.2 128 chr3R 27892747 intron CG34353 - chr3R 27892811 intron CG34353 - chr3R 27892875 intron CG34353 - chr3R_5_27890001 chr3R_27890001 RAL-307_100b 3771 chr3R 28019565 28019588 chr3R 28019682 28019705 21 115 12.0 5.5 8.8 2.1 140 chr3R 28019565 intergenic not near genes chr3R 28019635 intergenic not near genes chr3R 28019705 intergenic not near genes chr3R_21_28015001 chr3R_28015001 RAL-307_100b 3772 chr3R 28041811 28041860 chr3R 28042040 28042089 39 227 14.0 9.5 11.8 3.0 278 chr3R 28041811 intron CG34362 + chr3R 28041950 intron CG34362 + chr3R 28042089 intron CG34362 + chr3R_39_28040001 chr3R_28040001 RAL-307_100b 3773 chr3R 28068476 28068478 chr3R 28073943 28073945 I-element 6 5467 1.0 15.5 8.2 0.7 5469 chr3R 28068476 intron CG34362 + chr3R 28071210 intron CG34362 + chr3R 28073945 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-307_100b 3774 chr3R 28068479 28068524 chr3R 28073941 28073984 I-element 29 5466 1.5 15.5 8.5 3.1 5505 chr3R 28068479 intron CG34362 + chr3R 28071232 intron CG34362 + chr3R 28073984 intron CG34362 + chr3R_29_28070001 chr3R_28070001 RAL-307_100b 3775 chr3R 28103301 28103321 chr3R 28103419 28103438 18 115 17.0 14.5 15.8 1.1 137 chr3R 28103301 intergenic not near genes chr3R 28103370 intergenic not near genes chr3R 28103438 intergenic not near genes chr3R_18_28100001 chr3R_28100001 RAL-307_100b 3776 chr3R 28103325 28103359 chr3R 28103416 28103472 22 106 8.5 14.0 11.2 1.8 147 chr3R 28103325 intergenic not near genes chr3R 28103398 intergenic not near genes chr3R 28103472 intergenic not near genes chr3R_22_28100001 chr3R_28100001 RAL-307_100b 3777 chr3R 28164865 28164909 chr3R 28164968 28165012 10 102 12.0 0.0 6.0 1.4 147 chr3R 28164865 intron CG34354 + chr3R 28164938 intron CG34354 + chr3R 28165012 intron CG34354 + chr3R_10_28160001 chr3R_28160001 RAL-307_100b 3778 chr3R 28173653 28173705 chr3R 28181106 28181149 mdg1 50 7452 7.0 13.5 10.2 4.5 7496 chr3R 28173653 intron CG34354 + chr3R 28177401 intron CG34354 + chr3R 28181149 intron CG34354 + chr3R_50_28175001 chr3R_28175001 RAL-307_100b 3779 chr3R 28253316 28253368 chr3R 28255851 28255903 jockey 46 2529 12.5 23.5 18.0 2.4 2587 chr3R 28253316 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255903 intergenic not near genes chr3R_46_28250001 chr3R_28250001 RAL-307_100b 3780 chr3R 28262648 28262685 chr3R 28262749 28262786 26 99 15.0 22.0 18.5 1.3 138 chr3R 28262648 intergenic CG43125 - chr3R 28262717 intergenic CG43125 - chr3R 28262786 exon CG43125 - chr3R_26_28260001 chr3R_28260001 RAL-307_100b 3781 chr3R 28302081 28302129 chr3R 28302545 28302586 jockey 51 463 16.0 20.0 18.0 2.7 505 chr3R 28302081 intergenic not near genes chr3R 28302334 intergenic not near genes chr3R 28302586 intergenic not near genes chr3R_51_28300001 chr3R_28300001 RAL-307_100b 3782 chr3R 28308048 28308080 chr3R 28308150 28308181 20 100 37.5 18.5 28.0 0.7 133 chr3R 28308048 intergenic not near genes chr3R 28308114 intergenic not near genes chr3R 28308181 intergenic not near genes chr3R_20_28305001 chr3R_28305001 RAL-307_100b 3783 chr3R 28352473 28352481 chr3R 28352627 28352635 17 154 52.0 15.5 33.8 0.5 162 chr3R 28352473 exon Or98b + chr3R 28352554 intron Or98b + chr3R 28352635 exon Or98b + chr3R_17_28350001 chr3R_28350001 RAL-307_100b 3784 chr3R 28352482 28352530 chr3R 28352624 28352684 58 151 17.0 15.0 16.0 3.4 202 chr3R 28352482 exon Or98b + chr3R 28352583 intron Or98b + chr3R 28352684 exon Or98b + chr3R_58_28350001 chr3R_28350001 RAL-307_100b 3785 chr3R 28393672 28393731 chr3R 28393797 28393856 68 124 10.5 8.5 9.5 6.5 184 chr3R 28393672 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393856 intergenic not near genes chr3R_68_28390001 chr3R_28390001 RAL-307_100b 3786 chr3R 28407686 28407738 chr3R 28407793 28407845 36 107 13.0 17.5 15.2 2.2 159 chr3R 28407686 intergenic not near genes chr3R 28407766 intergenic not near genes chr3R 28407845 intergenic not near genes chr3R_36_28405001 chr3R_28405001 RAL-307_100b 3787 chr3R 28424150 28424205 chr3R 28424260 28424319 49 111 14.0 14.0 14.0 3.3 169 chr3R 28424150 intron beat-VI + chr3R 28424234 intron beat-VI + chr3R 28424319 intron beat-VI + chr3R_49_28420001 chr3R_28420001 RAL-307_100b 3788 chr3R 28441958 28441966 chr3R 28442078 28442086 5 120 26.0 19.0 22.5 0.2 128 chr3R 28441958 intron beat-VI + chr3R 28442022 intron beat-VI + chr3R 28442086 intron beat-VI + chr3R_5_28440001 chr3R_28440001 RAL-307_100b 3789 chr3R 28441967 28442015 chr3R 28442077 28442079 38 112 17.0 18.0 17.5 2.1 112 chr3R 28441967 intron beat-VI + chr3R 28442023 intron beat-VI + chr3R 28442079 intron beat-VI + chr3R_38_28440001 chr3R_28440001 RAL-307_100b 3790 chr3R 28599352 28599367 chr3R 28599524 28599532 9 171 31.0 11.0 21.0 0.4 180 chr3R 28599352 intergenic Noa36 - chr3R 28599442 intergenic Noa36 - chr3R 28599532 intergenic Noa36 - chr3R_9_28595001 chr3R_28595001 RAL-307_100b 3791 chr3R 28599368 28599405 chr3R 28599523 28599577 20 168 8.5 11.0 9.8 1.9 209 chr3R 28599368 intergenic Noa36 - chr3R 28599472 intergenic Noa36 - chr3R 28599577 intergenic Noa36 - chr3R_20_28595001 chr3R_28595001 RAL-307_100b 3792 chr3R 28667861 28667877 chr3R 28668005 28668021 9 141 101.0 40.0 70.5 0.1 160 chr3R 28667861 intergenic not near genes chr3R 28667941 intergenic not near genes chr3R 28668021 intergenic not near genes chr3R_9_28665001 chr3R_28665001 RAL-307_100b 3793 chr3R 28667879 28667921 chr3R 28668003 28668014 31 129 42.5 37.5 40.0 0.8 135 chr3R 28667879 intergenic not near genes chr3R 28667946 intergenic not near genes chr3R 28668014 intergenic not near genes chr3R_31_28665001 chr3R_28665001 RAL-307_100b 3794 chr3R 28742463 28742515 chr3R 28742563 28742611 40 100 18.0 16.5 17.2 2.2 148 chr3R 28742463 intron AstA-R2 - chr3R 28742537 intron AstA-R2 - chr3R 28742611 intron AstA-R2 - chr3R_40_28740001 chr3R_28740001 RAL-307_100b 3795 chr3R 28758267 28758278 chr3R 28763904 28763920 roo 11 5639 37.5 1.0 19.2 0.5 5653 chr3R 28758267 intergenic aqrs - chr3R 28761094 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_11_28760001 chr3R_28760001 RAL-307_100b 3796 chr3R 28758299 28758307 chr3R 28771330 28771339 Stalker4 7 13032 16.5 5.5 11.0 0.6 13040 chr3R 28758299 intergenic aqrs - chr3R 28764819 intergenic not near genes chr3R 28771339 intergenic not near genes chr3R_7_28760001 chr3R_28760001 RAL-307_100b 3797 chr3R 28758312 28758316 chr3R 28771339 28771348 Stalker4 5 13031 11.5 7.0 9.2 0.5 13036 chr3R 28758312 intergenic aqrs - chr3R 28764830 intergenic not near genes chr3R 28771348 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-307_100b 3798 chr3R 28792862 28792902 chr3R 28797967 28798022 jockey 30 5111 7.0 15.0 11.0 2.5 5160 chr3R 28792862 intergenic not near genes chr3R 28795442 intergenic not near genes chr3R 28798022 intergenic not near genes chr3R_30_28795001 chr3R_28795001 RAL-307_100b 3799 chr3R 21907534 21907536 chr3R 28831799 28831802 43 6924266 81.5 78.5 80.0 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_43_25365001 chr3R_25365001 RAL-307_100b 3800 chr3R 28922739 28922765 chr3R 28922840 28922866 18 100 14.0 0.0 7.0 2.2 127 chr3R 28922739 3` UTR Doa + chr3R 28922802 intergenic Doa +,CG11828 + chr3R 28922866 intergenic Doa +,CG11828 + chr3R_18_28920001 chr3R_28920001 RAL-307_100b 3801 chr3R 28931951 28931960 chr3R 28933667 28933681 6 1717 98.5 133.0 115.8 0.1 1730 chr3R 28931951 intron CG14521 - chr3R 28932816 intron CG14521 - chr3R 28933681 intron CG14521 - chr3R_6_28930001 chr3R_28930001 RAL-307_100b 3802 chr3R 28931950 28932003 chr3R 28933682 28933720 58 1729 125.5 120.5 123.0 0.5 1770 chr3R 28931950 intron CG14521 - chr3R 28932835 intron CG14521 - chr3R 28933720 intron CG14521 - chr3R_58_28930001 chr3R_28930001 RAL-307_100b 3803 chr3R 28938469 28938520 chr3R 28938596 28938624 25 122 22.0 1.0 11.5 2.0 155 chr3R 28938469 intron CG14521 - chr3R 28938546 intron CG14521 - chr3R 28938624 intron CG14521 - chr3R_25_28935001 chr3R_28935001 RAL-307_100b 3804 chr3R 28960484 28960542 chr3R 28960594 28960652 53 108 7.5 15.0 11.2 4.3 168 chr3R 28960484 intron CG14521 - chr3R 28960568 intron CG14521 - chr3R 28960652 intron CG14521 - chr3R_53_28960001 chr3R_28960001 RAL-307_100b 3805 chr3R 28966828 28966885 chr3R 28966973 28967005 49 141 10.0 14.5 12.2 3.7 177 chr3R 28966828 intron CG14521 - chr3R 28966916 intron CG14521 - chr3R 28967005 intron CG14521 - chr3R_49_28965001 chr3R_28965001 RAL-307_100b 3806 chr3R 28968390 28968449 chr3R 28968492 28968551 44 101 11.0 9.5 10.2 3.9 161 chr3R 28968390 intron CG14521 - chr3R 28968470 intron CG14521 - chr3R 28968551 intron CG14521 - chr3R_44_28965001 chr3R_28965001 RAL-307_100b 3807 chr3R 28978136 28978159 chr3R 28978259 28978282 17 123 14.5 7.0 10.8 1.4 146 chr3R 28978136 intergenic not near genes chr3R 28978209 intergenic not near genes chr3R 28978282 intergenic not near genes chr3R_17_28975001 chr3R_28975001 RAL-307_100b 3808 chr3R 28985043 28985092 chr3R 28985170 28985221 30 128 7.5 10.0 8.8 3.1 178 chr3R 28985043 intergenic not near genes chr3R 28985132 intergenic not near genes chr3R 28985221 intergenic not near genes chr3R_30_28985001 chr3R_28985001 RAL-307_100b 3809 chr3R 28988983 28989020 chr3R 28989085 28989124 34 103 0.0 12.5 6.2 4.7 141 chr3R 28988983 intergenic not near genes chr3R 28989054 intergenic not near genes chr3R 28989124 intergenic not near genes chr3R_34_28985001 chr3R_28985001 RAL-307_100b 3810 chr3R 28989521 28989557 chr3R 28989642 28989676 34 116 22.0 17.0 19.5 1.7 155 chr3R 28989521 intergenic not near genes chr3R 28989598 intergenic not near genes chr3R 28989676 intergenic not near genes chr3R_34_28985001 chr3R_28985001 RAL-307_100b 3811 chr3R 29030574 29030630 chr3R 29030678 29030734 47 101 13.5 11.5 12.5 3.5 160 chr3R 29030574 3` UTR CG1951 + chr3R 29030654 3` UTR CG1951 + chr3R 29030734 3` UTR CG1951 + chr3R_47_29030001 chr3R_29030001 RAL-307_100b 3812 chr3R 29032720 29032739 chr3R 29032822 29032830 13 101 38.5 16.0 27.2 0.5 110 chr3R 29032720 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032775 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032830 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_13_29030001 chr3R_29030001 RAL-307_100b 3813 chr3R 29032740 29032776 chr3R 29032821 29032833 36 92 16.5 15.5 16.0 2.1 93 chr3R 29032740 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032786 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032833 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_36_29030001 chr3R_29030001 RAL-307_100b 3814 chr3R 29034073 29034097 chr3R 29034466 29034517 21 418 2.0 11.0 6.5 2.8 444 chr3R 29034073 5` UTR CR45044 + chr3R 29034295 intergenic CR45044 +,Cpsf100 +,beta4GalNAcTB - chr3R 29034517 intergenic Cpsf100 +,CR45044 + chr3R_21_29030001 chr3R_29030001 RAL-307_100b 3815 chr3R 29046458 29046513 chr3R 29046564 29046588 33 92 12.0 2.5 7.2 4.0 130 chr3R 29046458 3` UTR Pkc98E + chr3R 29046523 3` UTR Pkc98E + chr3R 29046588 3` UTR Pkc98E + chr3R_33_29045001 chr3R_29045001 RAL-307_100b 3816 chr3R 29049151 29049195 chr3R 29049257 29049301 27 103 11.0 10.0 10.5 2.3 150 chr3R 29049151 intergenic Pkc98E +,CG11837 + chr3R 29049226 intergenic Pkc98E +,CG11837 + chr3R 29049301 intergenic Pkc98E +,CG11837 + chr3R_27_29045001 chr3R_29045001 RAL-307_100b 3817 chr3R 29070029 29070080 chr3R 29070135 29070144 45 103 13.5 15.0 14.2 3.0 115 chr3R 29070029 intron CG11873 + chr3R 29070086 intron CG11873 + chr3R 29070144 intron CG11873 + chr3R_45_29070001 chr3R_29070001 RAL-307_100b 3818 chr3R 29072765 29072786 chr3R 29072867 29072888 13 102 24.0 39.0 31.5 0.4 123 chr3R 29072765 intron CG11873 + chr3R 29072826 intron CG11873 + chr3R 29072888 intron CG11873 + chr3R_13_29070001 chr3R_29070001 RAL-307_100b 3819 chr3R 29079357 29079363 chr3R 29080753 29080755 NOF 7 1396 44.5 17.0 30.8 0.2 1398 chr3R 29079357 intron CG11873 + chr3R 29080056 intron CG11873 + chr3R 29080755 intron CG11873 + chr3R_7_29080001 chr3R_29080001 RAL-307_100b 3820 chr3R 29079364 29079398 chr3R 29080750 29080795 NOF 35 1394 26.0 15.0 20.5 1.6 1431 chr3R 29079364 intron CG11873 + chr3R 29080080 intron CG11873 + chr3R 29080795 intron CG11873 + chr3R_35_29080001 chr3R_29080001 RAL-307_100b 3821 chr3R 29079401 29079411 chr3R 29080749 29080773 NOF 5 1371 17.0 15.0 16.0 0.3 1372 chr3R 29079401 intron CG11873 + chr3R 29080087 intron CG11873 + chr3R 29080773 intron CG11873 + chr3R_5_29080001 chr3R_29080001 RAL-307_100b 3822 chr3R 29091412 29091428 chr3R 29091525 29091541 7 112 26.0 37.5 31.8 0.2 129 chr3R 29091412 intron CG11873 + chr3R 29091476 intron CG11873 + chr3R 29091541 intron CG11873 + chr3R_7_29090001 chr3R_29090001 RAL-307_100b 3823 chr3R 29141552 29141554 chr3R 29141638 29141658 4 99 23.0 60.5 41.8 0.1 106 chr3R 29141552 intron CG14516 + chr3R 29141605 intron CG14516 + chr3R 29141658 intron CG14516 + chr3R_4_29140001 chr3R_29140001 RAL-307_100b 3824 chr3R 29168468 29168508 chr3R 29168581 29168621 35 110 36.5 41.5 39.0 0.9 153 chr3R 29168468 intron CG11898 + chr3R 29168544 intron CG11898 + chr3R 29168621 intron CG11898 + chr3R_35_29165001 chr3R_29165001 RAL-307_100b 3825 chr3R 29179617 29179675 chr3R 29180102 29180143 19 480 41.5 57.0 49.2 0.4 526 chr3R 29179617 intron CG14509 - chr3R 29179880 intron CG14509 - chr3R 29180143 intron CG14509 - chr3R_19_29175001 chr3R_29175001 RAL-307_100b 3826 chr3R 29187000 29187039 chr3R 29187138 29187177 15 137 56.5 53.5 55.0 0.3 177 chr3R 29187000 intron CG14509 - chr3R 29187088 intron CG14509 - chr3R 29187177 intron CG14509 - chr3R_15_29185001 chr3R_29185001 RAL-307_100b 3827 chr3R 29213036 29213047 chr3R 29213144 29213155 14 108 32.5 15.5 24.0 0.6 119 chr3R 29213036 intergenic not near genes chr3R 29213096 intergenic not near genes chr3R 29213155 intergenic not near genes chr3R_14_29210001 chr3R_29210001 RAL-307_100b 3828 chr3R 29213048 29213092 chr3R 29213142 29213200 59 105 14.0 14.5 14.2 3.9 152 chr3R 29213048 intergenic not near genes chr3R 29213124 intergenic not near genes chr3R 29213200 intergenic not near genes chr3R_59_29210001 chr3R_29210001 RAL-307_100b 3829 chr3R 29237233 29237532 chr3R 29239266 29239450 34 2028 81.5 18.0 49.8 0.7 2217 chr3R 29237233 exon CG11951 - chr3R 29238342 intron CG11951 - chr3R 29239450 exon CG31427 - chr3R_34_29235001 chr3R_29235001 RAL-307_100b 3830 chr3R 29238751 29238791 chr3R 29238890 29238930 24 137 34.0 38.5 36.2 0.6 179 chr3R 29238751 intergenic CG11951 -,CG31427 - chr3R 29238840 3` UTR CG31427 - chr3R 29238930 3` UTR CG31427 - chr3R_24_29235001 chr3R_29235001 RAL-307_100b 3831 chr3R 29239212 29239250 chr3R 29245518 29245566 26 6310 22.0 101.0 61.5 0.4 6354 chr3R 29239212 exon CG31427 - chr3R 29242389 exon CG31445 - chr3R 29245566 exon SP1029 - chr3R_26_29240001 chr3R_29240001 RAL-307_100b 3832 chr3R 29237522 29237531 chr3R 29239405 29239428 10 1886 81.0 45.0 63.0 0.2 1906 chr3R 29237522 exon CG11951 - chr3R 29238475 intron CG11951 - chr3R 29239428 exon CG31427 - chr3R_10_29235001 chr3R_29235001 RAL-307_100b 3833 chr3R 29240304 29240499 chr3R 29240398 29240608 39 107 19.0 9.5 14.2 2.6 304 chr3R 29240304 5` UTR CG31427 - chr3R 29240456 intergenic CG31427 -,CG31445 - chr3R 29240608 3` UTR CG31445 - chr3R_39_29240001 chr3R_29240001 RAL-307_100b 3834 chr3R 29256240 29256254 chr3R 29256345 29256359 14 104 59.0 49.5 54.2 0.3 119 chr3R 29256240 intergenic CG45544 +,stg - chr3R 29256300 intergenic CG45544 +,stg - chr3R 29256359 intergenic CG45544 + chr3R_14_29255001 chr3R_29255001 RAL-307_100b 3835 chr3R 29256255 29256300 chr3R 29256344 29256398 38 99 44.5 49.0 46.8 0.8 143 chr3R 29256255 intergenic CG45544 +,stg - chr3R 29256326 intergenic CG45544 + chr3R 29256398 intergenic CG45544 + chr3R_38_29255001 chr3R_29255001 RAL-307_100b 3836 chr3R 29257548 29257560 chr3R 29257826 29257835 5 277 43.0 12.0 27.5 0.2 287 chr3R 29257548 intergenic CG45544 + chr3R 29257692 intergenic CG45544 + chr3R 29257835 intergenic CG45544 + chr3R_5_29255001 chr3R_29255001 RAL-307_100b 3837 chr3R 29319809 29319813 chr3R 29320153 29320157 jockey 5 344 21.0 18.5 19.8 0.2 348 chr3R 29319809 intergenic Cnx99A - chr3R 29319983 intergenic Cnx99A - chr3R 29320157 intergenic not near genes chr3R_5_29315001 chr3R_29315001 RAL-307_100b 3838 chr3R 29319814 29319839 chr3R 29320151 29320183 jockey 19 342 15.5 18.0 16.8 1.1 369 chr3R 29319814 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320183 intergenic not near genes chr3R_19_29315001 chr3R_29315001 RAL-307_100b 3839 chr3R 29319841 29319853 chr3R 29320148 29320186 jockey 9 337 12.5 16.5 14.5 0.6 345 chr3R 29319841 intergenic Cnx99A - chr3R 29320014 intergenic Cnx99A - chr3R 29320186 intergenic not near genes chr3R_9_29320001 chr3R_29320001 RAL-307_100b 3840 chr3R 29335371 29335418 chr3R 29335528 29335582 29 165 23.5 34.5 29.0 1.0 211 chr3R 29335371 intergenic not near genes chr3R 29335476 intergenic not near genes chr3R 29335582 intergenic not near genes chr3R_29_29335001 chr3R_29335001 RAL-307_100b 3841 chr3R 29344090 29344147 chr3R 29344303 29344359 23 208 32.5 45.0 38.8 0.6 269 chr3R 29344090 intergenic not near genes chr3R 29344224 intergenic not near genes chr3R 29344359 intergenic not near genes chr3R_23_29340001 chr3R_29340001 RAL-307_100b 3842 chr3R 29351733 29351742 chr3R 29351834 29351852 8 108 38.5 47.5 43.0 0.2 119 chr3R 29351733 intergenic not near genes chr3R 29351792 intergenic not near genes chr3R 29351852 intergenic not near genes chr3R_8_29350001 chr3R_29350001 RAL-307_100b 3843 chr3R 29351744 29351753 chr3R 29351833 29351863 9 107 39.0 46.5 42.8 0.2 119 chr3R 29351744 intergenic not near genes chr3R 29351804 intergenic not near genes chr3R 29351863 intergenic not near genes chr3R_9_29350001 chr3R_29350001 RAL-307_100b 3844 chr3R 29355932 29356081 chr3R 29356036 29356166 41 103 28.5 11.0 19.8 2.0 234 chr3R 29355932 intergenic CR45547 - chr3R 29356049 intergenic CR45547 - chr3R 29356166 3` UTR CR45547 - chr3R_41_29355001 chr3R_29355001 RAL-307_100b 3845 chr3R 29365370 29365409 chr3R 29365477 29365516 10 104 48.0 47.0 47.5 0.2 146 chr3R 29365370 intergenic not near genes chr3R 29365443 intergenic not near genes chr3R 29365516 intergenic not near genes chr3R_10_29365001 chr3R_29365001 RAL-307_100b 3846 chr3R 29376336 29376361 chr3R 29376449 29376474 13 112 37.5 39.0 38.2 0.3 138 chr3R 29376336 intergenic not near genes chr3R 29376405 intergenic not near genes chr3R 29376474 intergenic not near genes chr3R_13_29375001 chr3R_29375001 RAL-307_100b 3847 chr3R 29384164 29384172 chr3R 29384266 29384274 4 102 50.5 49.0 49.8 0.1 110 chr3R 29384164 intron Ptp99A + chr3R 29384219 intron Ptp99A + chr3R 29384274 intron Ptp99A + chr3R_4_29380001 chr3R_29380001 RAL-307_100b 3848 chr3R 29384174 29384192 chr3R 29384261 29384294 4 98 49.5 47.0 48.2 0.1 120 chr3R 29384174 intron Ptp99A + chr3R 29384234 intron Ptp99A + chr3R 29384294 intron Ptp99A + chr3R_4_29380001 chr3R_29380001 RAL-307_100b 3849 chr3R 29402958 29403003 chr3R 29403078 29403123 12 119 43.5 44.0 43.8 0.3 165 chr3R 29402958 intron Ptp99A + chr3R 29403040 intron Ptp99A + chr3R 29403123 intron Ptp99A + chr3R_12_29400001 chr3R_29400001 RAL-307_100b 3850 chr3R 29406593 29406644 chr3R 29407904 29407955 jockey 42 1303 19.5 18.5 19.0 2.1 1362 chr3R 29406593 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407955 intron Ptp99A + chr3R_42_29405001 chr3R_29405001 RAL-307_100b 3851 chr3R 29420081 29420087 chr3R 29420195 29420201 4 114 11.0 14.5 12.8 0.3 120 chr3R 29420081 intron Ptp99A + chr3R 29420141 intron Ptp99A + chr3R 29420201 intron Ptp99A + chr3R_4_29420001 chr3R_29420001 RAL-307_100b 3852 chr3R 29429762 29429806 chr3R 29429865 29429909 22 98 38.5 39.0 38.8 0.6 147 chr3R 29429762 intron Ptp99A + chr3R 29429836 intron Ptp99A + chr3R 29429909 intron Ptp99A + chr3R_22_29425001 chr3R_29425001 RAL-307_100b 3853 chr3R 29435049 29435099 chr3R 29435152 29435196 8 86 41.5 32.5 37.0 0.2 147 chr3R 29435049 intron Ptp99A + chr3R 29435122 intron Ptp99A + chr3R 29435196 intron Ptp99A + chr3R_8_29435001 chr3R_29435001 RAL-307_100b 3854 chr3R 29447794 29447847 chr3R 29447925 29447939 31 127 35.0 29.0 32.0 0.9 145 chr3R 29447794 intron Ptp99A + chr3R 29447866 intron Ptp99A + chr3R 29447939 intron Ptp99A + chr3R_31_29445001 chr3R_29445001 RAL-307_100b 3855 chr3R 29453709 29453786 chr3R 29453827 29453866 51 99 4.0 16.0 10.0 4.6 157 chr3R 29453709 intron Ptp99A + chr3R 29453788 intron Ptp99A + chr3R 29453866 intron Ptp99A + chr3R_51_29450001 chr3R_29450001 RAL-307_100b 3856 chr3R 29454103 29454158 chr3R 29454753 29454808 20 648 50.5 51.5 51.0 0.4 705 chr3R 29454103 intron Ptp99A + chr3R 29454456 intron Ptp99A + chr3R 29454808 intron Ptp99A + chr3R_20_29450001 chr3R_29450001 RAL-307_100b 3857 chr3R 29471982 29472040 chr3R 29472100 29472145 55 112 10.5 8.5 9.5 5.2 163 chr3R 29471982 intron Ptp99A + chr3R 29472064 intron Ptp99A + chr3R 29472145 intron Ptp99A + chr3R_55_29470001 chr3R_29470001 RAL-307_100b 3858 chr3R 29474415 29474461 chr3R 29474527 29474573 32 111 22.5 32.5 27.5 1.1 158 chr3R 29474415 intron Ptp99A + chr3R 29474494 intron Ptp99A + chr3R 29474573 intron Ptp99A + chr3R_32_29470001 chr3R_29470001 RAL-307_100b 3859 chr3R 29505868 29505926 chr3R 29505970 29506028 42 100 10.0 12.0 11.0 3.5 160 chr3R 29505868 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506028 intergenic not near genes chr3R_42_29505001 chr3R_29505001 RAL-307_100b 3860 chr3R 29539405 29539453 chr3R 29539506 29539528 32 96 19.0 0.0 9.5 3.0 123 chr3R 29539405 intergenic not near genes chr3R 29539466 intergenic not near genes chr3R 29539528 intergenic not near genes chr3R_32_29535001 chr3R_29535001 RAL-307_100b 3861 chr3R 29546734 29546784 chr3R 29546828 29546873 38 91 22.5 17.5 20.0 1.8 139 chr3R 29546734 intergenic not near genes chr3R 29546804 intergenic not near genes chr3R 29546873 intergenic not near genes chr3R_38_29545001 chr3R_29545001 RAL-307_100b 3862 chr3R 29550232 29550270 chr3R 29550336 29550339 13 100 32.5 24.5 28.5 0.4 107 chr3R 29550232 intergenic not near genes chr3R 29550286 intergenic not near genes chr3R 29550339 intergenic not near genes chr3R_13_29550001 chr3R_29550001 RAL-307_100b 3863 chr3R 29563975 29563986 chr3R 29564076 29564087 13 101 11.0 33.5 22.2 0.6 112 chr3R 29563975 intron Dr + chr3R 29564031 intron Dr + chr3R 29564087 intron Dr + chr3R_13_29560001 chr3R_29560001 RAL-307_100b 3864 chr3R 29563988 29563995 chr3R 29564043 29564096 7 94 12.5 23.5 18.0 0.4 108 chr3R 29563988 intron Dr + chr3R 29564042 intron Dr + chr3R 29564096 intron Dr + chr3R_7_29560001 chr3R_29560001 RAL-307_100b 3865 chr3R 29566386 29566412 chr3R 29566458 29566503 9 97 54.0 56.5 55.2 0.2 117 chr3R 29566386 intergenic not near genes chr3R 29566444 intergenic not near genes chr3R 29566503 intergenic not near genes chr3R_9_29565001 chr3R_29565001 RAL-307_100b 3866 chr3R 29581527 29581554 chr3R 29581633 29581660 4 106 49.5 51.0 50.2 0.1 133 chr3R 29581527 intergenic not near genes chr3R 29581594 intergenic not near genes chr3R 29581660 intergenic not near genes chr3R_4_29580001 chr3R_29580001 RAL-307_100b 3867 chr3R 29590355 29590391 chr3R 29590473 29590509 5 118 62.5 72.5 67.5 0.1 154 chr3R 29590355 exon CG31041 - chr3R 29590432 intron CG31041 - chr3R 29590509 exon CG31041 - chr3R_5_29590001 chr3R_29590001 RAL-307_100b 3868 chr3R 29624929 29624990 chr3R 29625030 29625091 45 100 23.0 24.5 23.8 1.8 162 chr3R 29624929 intergenic not near genes chr3R 29625010 intergenic not near genes chr3R 29625091 intergenic not near genes chr3R_45_29625001 chr3R_29625001 RAL-307_100b 3869 chr3R 29631503 29631560 chr3R 29631609 29631654 43 102 19.0 33.0 26.0 1.6 151 chr3R 29631503 3` UTR Dop1R2 - chr3R 29631578 3` UTR Dop1R2 - chr3R 29631654 3` UTR Dop1R2 - chr3R_43_29630001 chr3R_29630001 RAL-307_100b 3870 chr3R 29655626 29655665 chr3R 29655729 29655769 6 104 54.0 56.5 55.2 0.1 143 chr3R 29655626 intron Dop1R2 - chr3R 29655698 intron Dop1R2 - chr3R 29655769 intron Dop1R2 - chr3R_6_29655001 chr3R_29655001 RAL-307_100b 3871 chr3R 29711300 29711329 chr3R 29711413 29711424 14 108 26.0 27.0 26.5 0.5 124 chr3R 29711300 intergenic not near genes chr3R 29711362 intergenic not near genes chr3R 29711424 intergenic not near genes chr3R_14_29710001 chr3R_29710001 RAL-307_100b 3872 chr3R 29738241 29738295 chr3R 29739733 29739765 hobo 59 1490 15.0 16.5 15.8 3.5 1524 chr3R 29738241 intergenic CG1969 +,CG7598 + chr3R 29739003 intron CG1969 + chr3R 29739765 5` UTR CG1969 + chr3R_59_29735001 chr3R_29735001 RAL-307_100b 3873 chr3R 29754612 29754665 chr3R 29754976 29755053 9 374 36.0 8.0 22.0 0.4 441 chr3R 29754612 intergenic yata + chr3R 29754832 intergenic yata +,CR44953 - chr3R 29755053 intergenic CR44953 - chr3R_9_29750001 chr3R_29750001 RAL-307_100b 3874 chr3R 29754951 29754988 chr3R 29755054 29755085 5 99 0.5 15.0 7.8 0.6 134 chr3R 29754951 intergenic CR44953 -,yata + chr3R 29755018 intergenic CR44953 -,yata + chr3R 29755085 intergenic CR44953 - chr3R_5_29755001 chr3R_29755001 RAL-307_100b 3875 chr3R 29758913 29758971 chr3R 29759016 29759074 61 97 20.5 19.0 19.8 2.9 161 chr3R 29758913 3` UTR CR44953 - chr3R 29758994 3` UTR CR44953 - chr3R 29759074 intergenic CR44953 - chr3R_61_29755001 chr3R_29755001 RAL-307_100b 3876 chr3R 29760338 29760392 chr3R 29761562 29761614 pogo 50 1223 19.0 16.5 17.8 2.7 1276 chr3R 29760338 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761614 intergenic not near genes chr3R_50_29760001 chr3R_29760001 RAL-307_100b 3877 chr3R 29880986 29881038 chr3R 29881096 29881145 21 108 41.0 39.0 40.0 0.5 159 chr3R 29880986 intron CG31038 + chr3R 29881066 intron CG31038 + chr3R 29881145 intron CG31038 + chr3R_21_29880001 chr3R_29880001 RAL-307_100b 3878 chr3R 29881996 29882004 chr3R 29891178 29891186 roo 13 9182 41.0 22.5 31.8 0.4 9190 chr3R 29881996 intron CG31038 + chr3R 29886591 intron CG31038 + chr3R 29891186 intron CG31038 + chr3R_13_29885001 chr3R_29885001 RAL-307_100b 3879 chr3R 29882005 29882051 chr3R 29891177 29891233 roo 60 9181 13.5 22.5 18.0 3.2 9228 chr3R 29882005 intron CG31038 + chr3R 29886619 intron CG31038 + chr3R 29891233 intron CG31038 + chr3R_60_29885001 chr3R_29885001 RAL-307_100b 3880 chr3R 29950549 29950599 chr3R 29950651 29950701 51 92 15.5 14.5 15.0 3.2 152 chr3R 29950549 intergenic TkR99D - chr3R 29950625 intergenic TkR99D - chr3R 29950701 intergenic TkR99D - chr3R_51_29950001 chr3R_29950001 RAL-307_100b 3881 chr3R 29963454 29963512 chr3R 29963577 29963639 20 125 50.0 48.0 49.0 0.4 185 chr3R 29963454 intron TkR99D - chr3R 29963546 intron TkR99D - chr3R 29963639 intron TkR99D - chr3R_20_29960001 chr3R_29960001 RAL-307_100b 3882 chr3R 29966035 29966075 chr3R 29966140 29966174 29 97 20.5 28.0 24.2 1.2 139 chr3R 29966035 intron TkR99D - chr3R 29966104 intron TkR99D - chr3R 29966174 intron TkR99D - chr3R_29_29965001 chr3R_29965001 RAL-307_100b 3883 chr3R 29980792 29980836 chr3R 29980895 29980939 28 101 44.0 41.5 42.8 0.6 147 chr3R 29980792 intergenic not near genes chr3R 29980866 intergenic not near genes chr3R 29980939 intergenic not near genes chr3R_28_29980001 chr3R_29980001 RAL-307_100b 3884 chr3R 30028207 30028234 chr3R 30028327 30028354 15 120 41.0 32.0 36.5 0.4 147 chr3R 30028207 intron Axn + chr3R 30028280 intron Axn + chr3R 30028354 intron Axn + chr3R_15_30025001 chr3R_30025001 RAL-307_100b 3885 chr3R 30032135 30032180 chr3R 30032239 30032243 22 100 21.0 14.5 17.8 1.2 108 chr3R 30032135 intron Axn + chr3R 30032189 intron Axn + chr3R 30032243 intron Axn + chr3R_22_30030001 chr3R_30030001 RAL-307_100b 3886 chr3R 30069970 30070017 chr3R 30070088 30070145 45 125 11.5 19.5 15.5 2.7 175 chr3R 30069970 intron sima + chr3R 30070058 intron sima + chr3R 30070145 intron sima + chr3R_45_30070001 chr3R_30070001 RAL-307_100b 3887 chr3R 30084826 30084833 chr3R 30086318 30086325 hobo 12 1491 44.0 17.5 30.8 0.4 1499 chr3R 30084826 intron sima + chr3R 30085576 intron sima + chr3R 30086325 intron sima + chr3R_12_30085001 chr3R_30085001 RAL-307_100b 3888 chr3R 30084835 30084884 chr3R 30086316 30086340 hobo 54 1487 12.0 16.0 14.0 3.6 1505 chr3R 30084835 intron sima + chr3R 30085588 intron sima + chr3R 30086340 intron sima + chr3R_54_30085001 chr3R_30085001 RAL-307_100b 3889 chr3R 30147828 30147875 chr3R 30147939 30147986 51 109 0.0 18.5 9.2 5.0 158 chr3R 30147828 intron AdoR - chr3R 30147907 intron AdoR - chr3R 30147986 intron AdoR - chr3R_51_30145001 chr3R_30145001 RAL-307_100b 3890 chr3R 30182736 30182786 chr3R 30182895 30182950 50 160 16.0 12.0 14.0 3.3 214 chr3R 30182736 intergenic not near genes chr3R 30182843 intergenic not near genes chr3R 30182950 intergenic not near genes chr3R_50_30180001 chr3R_30180001 RAL-307_100b 3891 chr3R 30203365 30203388 chr3R 30203469 30203492 16 103 8.5 19.5 14.0 1.1 127 chr3R 30203365 intergenic CG9743 - chr3R 30203428 intergenic CG9743 - chr3R 30203492 intergenic CG9743 - chr3R_16_30200001 chr3R_30200001 RAL-307_100b 3892 chr3R 30210596 30210674 chr3R 30210734 30210778 16 106 0.0 14.5 7.2 2.0 182 chr3R 30210596 intergenic Anp +,CecA1 + chr3R 30210687 intergenic CecA1 +,Anp + chr3R 30210778 intergenic CecA1 +,Anp + chr3R_16_30210001 chr3R_30210001 RAL-307_100b 3893 chr3R 30238736 30238794 chr3R 30239925 30239983 1360 51 1185 15.5 17.5 16.5 2.9 1247 chr3R 30238736 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239983 intergenic not near genes chr3R_51_30235001 chr3R_30235001 RAL-307_100b 3894 chr3R 30246302 30246333 chr3R 30246406 30246429 18 103 0.0 10.5 5.2 2.9 127 chr3R 30246302 intron CG9733 - chr3R 30246366 intron CG9733 - chr3R 30246429 intron CG9733 - chr3R_18_30245001 chr3R_30245001 RAL-307_100b 3895 chr3R 30260343 30260396 chr3R 30260444 30260497 42 100 16.0 14.0 15.0 2.6 154 chr3R 30260343 intergenic not near genes chr3R 30260420 intergenic not near genes chr3R 30260497 intergenic not near genes chr3R_42_30260001 chr3R_30260001 RAL-307_100b 3896 chr3R 30262554 30262588 chr3R 30262676 30262700 33 120 2.5 7.0 4.8 5.7 146 chr3R 30262554 intergenic not near genes chr3R 30262627 intergenic not near genes chr3R 30262700 intergenic not near genes chr3R_33_30260001 chr3R_30260001 RAL-307_100b 3897 chr3R 30264448 30264470 chr3R 30264659 30264673 13 209 23.0 2.5 12.8 0.9 225 chr3R 30264448 intergenic not near genes chr3R 30264560 intergenic not near genes chr3R 30264673 intergenic not near genes chr3R_13_30260001 chr3R_30260001 RAL-307_100b 3898 chr3R 30264471 30264503 chr3R 30264657 30264670 16 203 14.5 2.5 8.5 1.7 199 chr3R 30264471 intergenic not near genes chr3R 30264570 intergenic not near genes chr3R 30264670 intergenic not near genes chr3R_16_30260001 chr3R_30260001 RAL-307_100b 3899 chr3R 30268219 30268271 chr3R 30268323 30268339 29 97 13.5 12.0 12.8 2.1 120 chr3R 30268219 intergenic not near genes chr3R 30268279 intergenic not near genes chr3R 30268339 intergenic not near genes chr3R_29_30265001 chr3R_30265001 RAL-307_100b 3900 chr3R 30287748 30287772 chr3R 30287856 30287870 9 106 22.5 11.5 17.0 0.5 122 chr3R 30287748 intron hdc + chr3R 30287809 intron hdc + chr3R 30287870 intron hdc + chr3R_9_30285001 chr3R_30285001 RAL-307_100b 3901 chr3R 30317325 30317341 chr3R 30324942 30324948 roo 13 7615 1.0 16.5 8.8 1.3 7623 chr3R 30317325 intron hdc + chr3R 30321136 intron hdc + chr3R 30324948 intron hdc + chr3R_13_30320001 chr3R_30320001 RAL-307_100b 3902 chr3R 30317342 30317357 chr3R 30324933 30324974 roo 11 7608 1.0 11.5 6.2 1.5 7632 chr3R 30317342 intron hdc + chr3R 30321158 intron hdc + chr3R 30324974 intron hdc + chr3R_11_30320001 chr3R_30320001 RAL-307_100b 3903 chr3R 30347005 30347012 chr3R 30347115 30347122 7 110 29.0 17.0 23.0 0.3 117 chr3R 30347005 intron hdc + chr3R 30347064 intron hdc + chr3R 30347122 intron hdc + chr3R_7_30345001 chr3R_30345001 RAL-307_100b 3904 chr3R 30347013 30347034 chr3R 30347114 30347144 11 104 23.0 16.5 19.8 0.5 131 chr3R 30347013 intron hdc + chr3R 30347078 intron hdc + chr3R 30347144 intron hdc + chr3R_11_30345001 chr3R_30345001 RAL-307_100b 3905 chr3R 30375521 30375560 chr3R 30383169 30383199 412 9 7646 12.0 8.5 10.2 0.8 7678 chr3R 30375521 intergenic not near genes chr3R 30379360 intergenic not near genes chr3R 30383199 intergenic not near genes chr3R_9_30375001 chr3R_30375001 RAL-307_100b 3906 chr3R 30396172 30396220 chr3R 30404482 30404530 roo 48 8308 15.5 13.5 14.5 3.1 8358 chr3R 30396172 intergenic not near genes chr3R 30400351 intergenic not near genes chr3R 30404530 5` UTR CR45570 + chr3R_48_30400001 chr3R_30400001 RAL-307_100b 3907 chr3R 30413036 30413092 chr3R 30413137 30413193 37 99 10.0 17.0 13.5 2.6 157 chr3R 30413036 intergenic not near genes chr3R 30413114 intergenic not near genes chr3R 30413193 intergenic not near genes chr3R_37_30410001 chr3R_30410001 RAL-307_100b 3908 chr3R 30422916 30422943 chr3R 30423039 30423066 26 118 28.5 13.0 20.8 1.2 150 chr3R 30422916 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30422991 intergenic CG2217 -,CG42740 -,CG15535 - chr3R 30423066 3` UTR CG15535 - chr3R_26_30420001 chr3R_30420001 RAL-307_100b 3909 chr3R 30422947 30422973 chr3R 30423035 30423045 30 106 14.5 10.5 12.5 2.2 98 chr3R 30422947 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30422996 intergenic CG2217 -,CG42740 -,CG15535 - chr3R 30423045 3` UTR CG15535 - chr3R_30_30420001 chr3R_30420001 RAL-307_100b 3910 chr3R 30426926 30426968 chr3R 30427030 30427034 29 101 26.5 2.0 14.2 1.9 108 chr3R 30426926 intron CG2218 - chr3R 30426980 intron CG2218 - chr3R 30427034 intron CG2218 - chr3R_29_30425001 chr3R_30425001 RAL-307_100b 3911 chr3R 30445486 30445543 chr3R 30445603 30445645 43 116 19.0 11.0 15.0 2.7 159 chr3R 30445486 intergenic aralar1 -,Osi23 - chr3R 30445566 intergenic aralar1 - chr3R 30445645 3` UTR aralar1 - chr3R_43_30445001 chr3R_30445001 RAL-307_100b 3912 chr3R 30448083 30448129 chr3R 30448186 30448226 28 97 16.0 0.0 8.0 3.1 143 chr3R 30448083 intron aralar1 - chr3R 30448154 intron aralar1 - chr3R 30448226 intron aralar1 - chr3R_28_30445001 chr3R_30445001 RAL-307_100b 3913 chr3R 30456365 30456424 chr3R 30456470 30456529 46 104 11.0 12.5 11.8 3.6 164 chr3R 30456365 intergenic CG2224 -,aralar1 - chr3R 30456447 3` UTR CG2224 - chr3R 30456529 3` UTR CG2224 - chr3R_46_30455001 chr3R_30455001 RAL-307_100b 3914 chr3R 30461465 30461521 chr3R 30461607 30461652 52 140 16.5 11.0 13.8 3.5 187 chr3R 30461465 intron CDase + chr3R 30461558 intron CDase + chr3R 30461652 intron CDase + chr3R_52_30460001 chr3R_30460001 RAL-307_100b 3915 chr3R 30480457 30480460 chr3R 30482943 30482953 jockey 5 2490 44.5 14.5 29.5 0.2 2496 chr3R 30480457 intron PH4alphaEFB + chr3R 30481705 intron PH4alphaEFB + chr3R 30482953 intron PH4alphaEFB + chr3R_5_30480001 chr3R_30480001 RAL-307_100b 3916 chr3R 30480462 30480511 chr3R 30482940 30482999 jockey 67 2488 9.5 14.5 12.0 5.2 2537 chr3R 30480462 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30482999 intron PH4alphaEFB + chr3R_67_30480001 chr3R_30480001 RAL-307_100b 3917 chr3R 30488098 30488115 chr3R 30488202 30488219 19 103 15.0 0.0 7.5 2.2 121 chr3R 30488098 intergenic Jon99Fii - chr3R 30488158 intergenic Jon99Fii - chr3R 30488219 intergenic Jon99Fii - chr3R_19_30485001 chr3R_30485001 RAL-307_100b 3918 chr3R 30498406 30498435 chr3R 30498609 30498660 29 220 0.0 16.5 8.2 3.2 254 chr3R 30498406 intron PH4alphaNE1 - chr3R 30498533 intron PH4alphaNE1 - chr3R 30498660 intron PH4alphaNE1 - chr3R_29_30495001 chr3R_30495001 RAL-307_100b 3919 chr3R 30538479 30538520 chr3R 30540547 30540588 32 2070 118.5 109.0 113.8 0.3 2109 chr3R 30538479 intron tmod + chr3R 30539534 intron tmod + chr3R 30540588 intron tmod + chr3R_32_30535001 chr3R_30535001 RAL-307_100b 3920 chr3R 30548295 30548333 chr3R 30548398 30548416 17 100 12.5 26.5 19.5 0.8 121 chr3R 30548295 intron tmod + chr3R 30548356 intron tmod + chr3R 30548416 intron tmod + chr3R_17_30545001 chr3R_30545001 RAL-307_100b 3921 chr3R 30564303 30564336 chr3R 30564409 30564444 19 106 8.0 24.0 16.0 1.1 141 chr3R 30564303 intron tmod + chr3R 30564374 intron tmod + chr3R 30564444 intron tmod + chr3R_19_30560001 chr3R_30560001 RAL-307_100b 3922 chr3R 30564337 30564349 chr3R 30564408 30564452 8 86 6.5 23.0 14.8 0.5 115 chr3R 30564337 intron tmod + chr3R 30564394 intron tmod + chr3R 30564452 intron tmod + chr3R_8_30560001 chr3R_30560001 RAL-307_100b 3923 chr3R 30627590 30627604 chr3R 30627689 30627709 19 101 36.5 21.5 29.0 0.6 119 chr3R 30627590 3` UTR CG2267 - chr3R 30627650 exon CG2267 - chr3R 30627709 exon CG2267 - chr3R_19_30625001 chr3R_30625001 RAL-307_100b 3924 chr3R 30627605 30627608 chr3R 30627687 30627698 5 88 34.0 20.5 27.2 0.2 93 chr3R 30627605 exon CG2267 - chr3R 30627652 exon CG2267 - chr3R 30627698 exon CG2267 - chr3R_5_30625001 chr3R_30625001 RAL-307_100b 3925 chr3R 30627609 30627639 chr3R 30627681 30627694 39 94 13.5 21.0 17.2 2.1 85 chr3R 30627609 exon CG2267 - chr3R 30627652 exon CG2267 - chr3R 30627694 exon CG2267 - chr3R_39_30625001 chr3R_30625001 RAL-307_100b 3926 chr3R 30677864 30677876 chr3R 30677997 30678009 12 132 5.0 20.5 12.8 0.9 145 chr3R 30677864 intergenic not near genes chr3R 30677936 intergenic not near genes chr3R 30678009 intergenic not near genes chr3R_12_30675001 chr3R_30675001 RAL-307_100b 3927 chr3R 30679493 30679552 chr3R 30686987 30687046 blood 46 7493 14.0 15.5 14.8 2.9 7553 chr3R 30679493 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687046 intergenic not near genes chr3R_46_30680001 chr3R_30680001 RAL-307_100b 3928 chr3R 30689494 30689554 chr3R 30689598 30689642 41 102 15.0 13.5 14.2 2.7 148 chr3R 30689494 intergenic not near genes chr3R 30689568 intergenic not near genes chr3R 30689642 intergenic not near genes chr3R_41_30685001 chr3R_30685001 RAL-307_100b 3929 chr3R 30700842 30700879 chr3R 30700990 30701027 25 146 13.5 0.5 7.0 3.1 185 chr3R 30700842 intergenic not near genes chr3R 30700934 intergenic not near genes chr3R 30701027 intergenic not near genes chr3R_25_30700001 chr3R_30700001 RAL-307_100b 3930 chr3R 30761324 30761366 chr3R 30761431 30761473 12 106 6.5 16.5 11.5 1.0 149 chr3R 30761324 intergenic not near genes chr3R 30761398 intergenic not near genes chr3R 30761473 intergenic not near genes chr3R_12_30760001 chr3R_30760001 RAL-307_100b 3931 chr3R 30795898 30795901 chr3R 30796241 30796244 4 343 39.0 11.0 25.0 0.2 346 chr3R 30795898 intron wts - chr3R 30796071 intron wts - chr3R 30796244 intron wts - chr3R_4_30795001 chr3R_30795001 RAL-307_100b 3932 chr3R 30795903 30795938 chr3R 30796240 30796259 33 340 14.5 10.5 12.5 2.4 356 chr3R 30795903 intron wts - chr3R 30796081 intron wts - chr3R 30796259 intron wts - chr3R_33_30795001 chr3R_30795001 RAL-307_100b 3933 chr3R 30801428 30801484 chr3R 30801566 30801585 36 131 15.0 9.5 12.2 2.7 157 chr3R 30801428 intron wts - chr3R 30801506 intron wts - chr3R 30801585 intron wts - chr3R_36_30800001 chr3R_30800001 RAL-307_100b 3934 chr3R 30818786 30818846 chr3R 30820376 30820390 1360 48 1587 7.0 15.0 11.0 4.0 1604 chr3R 30818786 intron cindr + chr3R 30819588 intron cindr + chr3R 30820390 intron cindr + chr3R_48_30815001 chr3R_30815001 RAL-307_100b 3935 chr3R 30831689 30831700 chr3R 30831790 30831801 11 101 19.0 27.0 23.0 0.5 112 chr3R 30831689 intron CG15544 + chr3R 30831745 intron CG15544 + chr3R 30831801 intron CG15544 + chr3R_11_30830001 chr3R_30830001 RAL-307_100b 3936 chr3R 30845059 30845064 chr3R 30845162 30845167 5 103 12.0 0.0 6.0 0.7 108 chr3R 30845059 intergenic not near genes chr3R 30845113 intergenic not near genes chr3R 30845167 intergenic not near genes chr3R_5_30845001 chr3R_30845001 RAL-307_100b 3937 chr3R 30859380 30859427 chr3R 30859483 30859489 44 101 12.5 10.0 11.2 3.6 109 chr3R 30859380 intergenic not near genes chr3R 30859434 intergenic not near genes chr3R 30859489 intergenic not near genes chr3R_44_30855001 chr3R_30855001 RAL-307_100b 3938 chr3R 30900501 30900512 chr3R 30900604 30900617 12 104 32.0 12.0 22.0 0.5 116 chr3R 30900501 exon Cyp4c3 + chr3R 30900559 3` UTR Cyp4c3 + chr3R 30900617 3` UTR Cyp4c3 + chr3R_12_30900001 chr3R_30900001 RAL-307_100b 3939 chr3R 30900513 30900553 chr3R 30900602 30900628 50 99 14.5 10.5 12.5 3.7 115 chr3R 30900513 exon Cyp4c3 + chr3R 30900570 3` UTR Cyp4c3 + chr3R 30900628 3` UTR Cyp4c3 + chr3R_50_30900001 chr3R_30900001 RAL-307_100b 3940 chr3R 30914959 30914967 chr3R 30915105 30915113 11 145 16.5 39.5 28.0 0.4 154 chr3R 30914959 intron Ptx1 + chr3R 30915036 intron Ptx1 + chr3R 30915113 intron Ptx1 + chr3R_11_30915001 chr3R_30915001 RAL-307_100b 3941 chr3R 30982575 30982627 chr3R 30982692 30982720 30 111 9.5 17.0 13.2 2.1 145 chr3R 30982575 intron 5-HT7 - chr3R 30982648 intron 5-HT7 - chr3R 30982720 intron 5-HT7 - chr3R_30_30980001 chr3R_30980001 RAL-307_100b 3942 chr3R 31047193 31047196 chr3R 31047508 31047515 5 318 41.5 15.0 28.2 0.2 322 chr3R 31047193 intergenic CanA1 + chr3R 31047354 intergenic not near genes chr3R 31047515 intergenic not near genes chr3R_5_31045001 chr3R_31045001 RAL-307_100b 3943 chr3R 31047198 31047246 chr3R 31047506 31047565 35 314 17.5 13.5 15.5 2.1 367 chr3R 31047198 intergenic CanA1 + chr3R 31047382 intergenic not near genes chr3R 31047565 intergenic not near genes chr3R_35_31045001 chr3R_31045001 RAL-307_100b 3944 chr3R 31047813 31047830 chr3R 31047934 31047951 14 121 15.5 12.0 13.8 0.9 138 chr3R 31047813 intergenic not near genes chr3R 31047882 intergenic not near genes chr3R 31047951 intergenic not near genes chr3R_14_31045001 chr3R_31045001 RAL-307_100b 3945 chr3R 31073317 31073346 chr3R 31073423 31073445 23 103 25.0 28.5 26.8 0.8 128 chr3R 31073317 exon Sox100B + chr3R 31073381 intron Sox100B + chr3R 31073445 intron Sox100B + chr3R_23_31070001 chr3R_31070001 RAL-307_100b 3946 chr3R 31074211 31074258 chr3R 31081834 31081879 springer 41 7622 19.0 19.0 19.0 2.0 7668 chr3R 31074211 intron Sox100B + chr3R 31078045 intron Sox100B + chr3R 31081879 intron Sox100B + chr3R_41_31075001 chr3R_31075001 RAL-307_100b 3947 chr3R 31084880 31084935 chr3R 31084981 31085036 35 99 11.0 13.0 12.0 2.7 156 chr3R 31084880 intergenic not near genes chr3R 31084958 intergenic not near genes chr3R 31085036 intergenic not near genes chr3R_35_31080001 chr3R_31080001 RAL-307_100b 3948 chr3R 31103178 31103181 chr3R 31103304 31103306 5 126 32.5 21.0 26.8 0.2 128 chr3R 31103178 intergenic not near genes chr3R 31103242 intergenic not near genes chr3R 31103306 intergenic not near genes chr3R_5_31100001 chr3R_31100001 RAL-307_100b 3949 chr3R 31103184 31103224 chr3R 31103295 31103350 28 121 11.5 17.0 14.2 1.8 166 chr3R 31103184 intergenic not near genes chr3R 31103267 intergenic not near genes chr3R 31103350 intergenic not near genes chr3R_28_31100001 chr3R_31100001 RAL-307_100b 3950 chr3R 31115059 31115108 chr3R 31115172 31115233 25 118 13.0 0.0 6.5 3.3 174 chr3R 31115059 intergenic not near genes chr3R 31115146 intergenic not near genes chr3R 31115233 intergenic not near genes chr3R_25_31115001 chr3R_31115001 RAL-307_100b 3951 chr3R 31137130 31137186 chr3R 31137235 31137279 39 100 8.5 13.0 10.8 3.3 149 chr3R 31137130 intron Gycbeta100B + chr3R 31137204 intron Gycbeta100B + chr3R 31137279 intron Gycbeta100B + chr3R_39_31135001 chr3R_31135001 RAL-307_100b 3952 chr3R 31161384 31161440 chr3R 31161923 31161979 46 532 17.5 12.0 14.8 2.9 595 chr3R 31161384 intron,intron Gycbeta100B +,stops - chr3R 31161682 intron,intron Gycbeta100B +,stops - chr3R 31161979 intron,intron Gycbeta100B +,stops - chr3R_46_31160001 chr3R_31160001 RAL-307_100b 3953 chr3R 31270873 31270882 chr3R 31270980 31270989 4 107 39.0 0.0 19.5 0.2 116 chr3R 31270873 intergenic not near genes chr3R 31270931 intergenic not near genes chr3R 31270989 intergenic not near genes chr3R_4_31270001 chr3R_31270001 RAL-307_100b 3954 chr3R 31279347 31279409 chr3R 31285563 31285607 diver 47 6212 11.0 16.0 13.5 3.2 6260 chr3R 31279347 intergenic not near genes chr3R 31282477 intergenic not near genes chr3R 31285607 intergenic not near genes chr3R_47_31280001 chr3R_31280001 RAL-307_100b 3955 chr3R 31413068 31413081 chr3R 31418293 31418306 copia 10 5225 29.0 2.0 15.5 0.6 5238 chr3R 31413068 intron Gprk2 + chr3R 31415687 intron Gprk2 + chr3R 31418306 intron Gprk2 + chr3R_10_31415001 chr3R_31415001 RAL-307_100b 3956 chr3R 31413084 31413123 chr3R 31418289 31418317 copia 28 5210 10.5 2.0 6.2 3.9 5233 chr3R 31413084 intron Gprk2 + chr3R 31415700 intron Gprk2 + chr3R 31418317 intron Gprk2 + chr3R_28_31415001 chr3R_31415001 RAL-307_100b 3957 chr3R 31435336 31435391 chr3R 31435513 31435568 61 174 12.0 15.5 13.8 4.1 232 chr3R 31435336 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435568 intron Gprk2 + chr3R_61_31435001 chr3R_31435001 RAL-307_100b 3958 chr3R 31654717 31654723 chr3R 31654843 31654849 6 126 40.5 9.5 25.0 0.2 132 chr3R 31654717 intron kek6 + chr3R 31654783 intron kek6 + chr3R 31654849 intron kek6 + chr3R_6_31650001 chr3R_31650001 RAL-307_100b 3959 chr3R 31654724 31654766 chr3R 31654842 31654892 33 119 15.0 9.5 12.2 2.5 168 chr3R 31654724 intron kek6 + chr3R 31654808 intron kek6 + chr3R 31654892 intron kek6 + chr3R_33_31650001 chr3R_31650001 RAL-307_100b 3960 chr3R 31691509 31691562 chr3R 31696296 31696353 Doc 58 4788 15.5 21.5 18.5 3.0 4844 chr3R 31691509 intergenic not near genes chr3R 31693931 intergenic not near genes chr3R 31696353 intergenic not near genes chr3R_58_31690001 chr3R_31690001 RAL-307_100b 3961 chr3R 31753727 31753761 chr3R 31753899 31753923 5 168 71.5 76.0 73.8 0.1 196 chr3R 31753727 intron salt - chr3R 31753825 intron salt - chr3R 31753923 exon salt - chr3R_5_31750001 chr3R_31750001 RAL-307_100b 3962 chr3R 31788450 31788507 chr3R 31788557 31788614 68 104 9.0 12.0 10.5 5.9 164 chr3R 31788450 intron faf + chr3R 31788532 intron faf + chr3R 31788614 intron faf + chr3R_68_31785001 chr3R_31785001 RAL-307_100b 3963 chr3R 31858149 31858206 chr3R 31858274 31858334 16 122 0.0 8.0 4.0 3.2 185 chr3R 31858149 intron heph - chr3R 31858242 intron heph - chr3R 31858334 intron heph - chr3R_16_31855001 chr3R_31855001 RAL-307_100b 3964 chr3R 31858751 31858784 chr3R 31858832 31858885 25 100 6.5 18.0 12.2 1.9 134 chr3R 31858751 intron heph - chr3R 31858818 intron heph - chr3R 31858885 intron heph - chr3R_25_31855001 chr3R_31855001 RAL-307_100b 3965 chr3R 31887550 31887607 chr3R 31887656 31887713 48 105 13.5 14.5 14.0 3.2 163 chr3R 31887550 intron heph - chr3R 31887632 intron heph - chr3R 31887713 intron heph - chr3R_48_31885001 chr3R_31885001 RAL-307_100b 3966 chr3R 31924602 31924606 chr3R 31924703 31924712 6 105 1.5 48.5 25.0 0.2 110 chr3R 31924602 intron heph - chr3R 31924657 intron heph - chr3R 31924712 intron heph - chr3R_6_31920001 chr3R_31920001 RAL-307_100b 3967 chr3R 31930875 31930883 chr3R 31931011 31931019 6 136 21.5 17.0 19.2 0.3 144 chr3R 31930875 intron heph - chr3R 31930947 intron heph - chr3R 31931019 intron heph - chr3R_6_31930001 chr3R_31930001 RAL-307_100b 3968 chr3R 31930885 31931183 chr3R 31931009 31931288 31 125 35.0 16.0 25.5 1.2 403 chr3R 31930885 intron heph - chr3R 31931086 intron heph - chr3R 31931288 intron heph - chr3R_31_31930001 chr3R_31930001 RAL-307_100b 3969 chr3R 31931185 31931192 chr3R 31931293 31931298 5 108 30.0 22.5 26.2 0.2 113 chr3R 31931185 intron heph - chr3R 31931242 intron heph - chr3R 31931298 intron heph - chr3R_5_31930001 chr3R_31930001 RAL-307_100b 3970 chr3R 31931193 31931215 chr3R 31931280 31931323 20 105 18.0 17.0 17.5 1.1 130 chr3R 31931193 intron heph - chr3R 31931258 intron heph - chr3R 31931323 intron heph - chr3R_20_31930001 chr3R_31930001 RAL-307_100b 3971 chr3R 31997969 31998024 chr3R 32005464 32005499 blood 46 7493 8.0 19.0 13.5 3.2 7530 chr3R 31997969 intron heph - chr3R 32001734 intron heph - chr3R 32005499 intron heph - chr3R_46_32000001 chr3R_32000001 RAL-307_100b 3972 chr3R 32009959 32010017 chr3R 32010109 32010167 49 145 12.0 11.0 11.5 3.9 208 chr3R 32009959 intron heph - chr3R 32010063 intron heph - chr3R 32010167 intron heph - chr3R_49_32010001 chr3R_32010001 RAL-307_100b 3973 chr4 76474 76504 chr4 81942 81972 I-element 22 5467 20.0 16.0 18.0 1.2 5498 chr4 76474 intron pan + chr4 79223 intron pan + chr4 81972 intron pan + chr4_22_75001 chr4_75001 RAL-307_100b 3974 chr4 76505 76515 chr4 81936 81983 I-element 9 5459 17.0 13.5 15.2 0.6 5478 chr4 76505 intron pan + chr4 79244 intron pan + chr4 81983 intron pan + chr4_9_75001 chr4_75001 RAL-307_100b 3975 chr4 257380 257435 chr4 257573 257630 47 193 16.0 14.0 15.0 2.9 250 chr4 257380 exon RhoGAP102A + chr4 257505 intron RhoGAP102A + chr4 257630 intron RhoGAP102A + chr4_47_255001 chr4_255001 RAL-307_100b 3976 chr4 314493 314532 chr4 314596 314635 19 102 5.0 9.0 7.0 2.4 142 chr4 314493 intergenic Zip102B -,CG32850 + chr4 314564 intergenic CG32850 +,Zip102B - chr4 314635 intergenic CG32850 + chr4_19_310001 chr4_310001 RAL-307_100b 3977 chr4 319969 320020 chr4 328170 328221 Stalker2 21 8200 5.5 11.5 8.5 2.2 8252 chr4 319969 3` UTR CG32850 + chr4 324095 intron CG32850 + chr4 328221 3` UTR,3` UTR CG32850 +,PMCA - chr4_21_320001 chr4_320001 RAL-307_100b 3978 chr4 368677 368710 chr4 368834 368867 16 157 13.0 18.0 15.5 1.0 190 chr4 368677 intron Hcf + chr4 368772 intron Hcf + chr4 368867 intron Hcf + chr4_16_365001 chr4_365001 RAL-307_100b 3979 chr4 671587 671604 chr4 680189 680212 Tirant 19 8607 27.0 18.0 22.5 0.8 8625 chr4 671587 intron CG11360 + chr4 675900 intron CG11360 + chr4 680212 intron CG11360 + chr4_19_675001 chr4_675001 RAL-307_100b 3980 chr4 671605 671606 chr4 680188 680212 Tirant 4 8600 25.5 17.0 21.2 0.2 8607 chr4 671605 intron CG11360 + chr4 675908 intron CG11360 + chr4 680212 intron CG11360 + chr4_4_675001 chr4_675001 RAL-307_100b 3981 chr4 671607 671630 chr4 680186 680238 Tirant 31 8605 14.0 16.0 15.0 1.9 8631 chr4 671607 intron CG11360 + chr4 675922 intron CG11360 + chr4 680238 intron CG11360 + chr4_31_675001 chr4_675001 RAL-307_100b 3982 chr4 694884 694903 chr4 694990 695004 15 104 22.0 9.5 15.8 0.9 120 chr4 694884 intron myo - chr4 694944 intron myo - chr4 695004 intron myo - chr4_15_690001 chr4_690001 RAL-307_100b 3983 chr4 694905 694932 chr4 694989 695023 25 100 9.0 9.5 9.2 2.5 118 chr4 694905 intron myo - chr4 694964 intron myo - chr4 695023 intron myo - chr4_25_690001 chr4_690001 RAL-307_100b 3984 chr4 706630 706646 chr4 706838 706854 11 208 72.0 75.5 73.8 0.1 224 chr4 706630 intron ey + chr4 706742 intron ey + chr4 706854 intron ey + chr4_11_705001 chr4_705001 RAL-307_100b 3985 chr4 959600 959652 chr4 959804 959856 40 202 11.5 11.0 11.2 3.3 256 chr4 959600 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959856 5` UTR CR44030 + chr4_40_955001 chr4_955001 RAL-307_100b 3986 chrX 288635 288682 chrX 288747 288773 42 119 10.0 12.0 11.0 3.5 138 chrX 288635 intron,intron CG3777 +,CG13375 - chrX 288704 intron,intron CG3777 +,CG13375 - chrX 288773 intron,intron CG3777 +,CG13375 - chrX_42_285001 chrX_285001 RAL-307_100b 3987 chrX 295832 295881 chrX 303477 303526 412 44 7643 13.0 12.5 12.8 3.2 7694 chrX 295832 intron CG3777 + chrX 299679 intron CG3777 + chrX 303526 intron CG3777 + chrX_44_295001 chrX_295001 RAL-307_100b 3988 chrX 318448 318503 chrX 323559 323584 flea 36 5108 11.5 13.0 12.2 2.7 5136 chrX 318448 intron,intron CG3777 +,CG32816 - chrX 321016 intron,intron CG3777 +,CG32816 - chrX 323584 intron,intron CG3777 +,CG32816 - chrX_36_320001 chrX_320001 RAL-307_100b 3989 chrX 388775 388780 chrX 390342 390347 5 1567 74.5 66.0 70.2 0.1 1572 chrX 388775 intron CG32816 - chrX 389561 intron CG32816 - chrX 390347 intron CG32816 - chrX_5_385001 chrX_385001 RAL-307_100b 3990 chrX 388782 388802 chrX 390334 390369 20 1560 68.5 61.5 65.0 0.3 1587 chrX 388782 intron CG32816 - chrX 389576 intron CG32816 - chrX 390369 intron CG32816 - chrX_20_385001 chrX_385001 RAL-307_100b 3991 chrX 388249 388283 chrX 390571 390625 48 2325 82.5 95.5 89.0 0.5 2376 chrX 388249 intron CG32816 - chrX 389437 intron CG32816 - chrX 390625 intron CG32816 - chrX_48_385001 chrX_385001 RAL-307_100b 3992 chrX 428396 428401 chrX 434606 434611 3S18 4 6210 41.5 14.5 28.0 0.1 6215 chrX 428396 intron CG32816 - chrX 431504 intron CG32816 - chrX 434611 intron CG32816 - chrX_4_430001 chrX_430001 RAL-307_100b 3993 chrX 428403 428445 chrX 434603 434655 3S18 31 6207 17.5 12.0 14.8 2.0 6252 chrX 428403 intron CG32816 - chrX 431529 intron CG32816 - chrX 434655 intron CG32816 - chrX_31_430001 chrX_430001 RAL-307_100b 3994 chrX 494581 494632 chrX 494698 494736 35 113 10.5 19.5 15.0 2.2 155 chrX 494581 intergenic CG17778 + chrX 494658 5` UTR CG17778 + chrX 494736 intron CG17778 + chrX_35_490001 chrX_490001 RAL-307_100b 3995 chrX 551401 551411 chrX 558988 558998 412 5 7585 36.0 16.0 26.0 0.2 7597 chrX 551401 intron Appl + chrX 555200 intron Appl + chrX 558998 intron Appl + chrX_5_555001 chrX_555001 RAL-307_100b 3996 chrX 551414 551454 chrX 558982 559041 412 36 7578 17.5 14.5 16.0 2.1 7627 chrX 551414 intron Appl + chrX 555228 intron Appl + chrX 559041 intron Appl + chrX_36_555001 chrX_555001 RAL-307_100b 3997 chrX 701735 701735 chrX 12946233 12946235 4 12244499 55.5 58.0 56.8 0.1 12244500 chrX 701735 intron sdk + chrX 6823985 exon Atx-1 + chrX 12946235 3` UTR fne + chrX_4_6820001 chrX_6820001 RAL-307_100b 3998 chrX 714243 714284 chrX 714401 714420 33 154 18.0 18.0 18.0 1.7 177 chrX 714243 intron sdk + chrX 714332 intron sdk + chrX 714420 intron sdk + chrX_33_710001 chrX_710001 RAL-307_100b 3999 chrX 802266 802278 chrX 802367 802380 11 102 40.5 17.0 28.8 0.4 114 chrX 802266 exon CG13359 - chrX 802323 exon CG13359 - chrX 802380 exon CG13359 - chrX_11_800001 chrX_800001 RAL-307_100b 4000 chrX 802280 802321 chrX 802362 802383 43 93 19.0 18.5 18.8 2.2 103 chrX 802280 exon CG13359 - chrX 802332 exon CG13359 - chrX 802383 exon CG13359 - chrX_43_800001 chrX_800001 RAL-307_100b 4001 chrX 812246 812255 chrX 817902 817911 297 9 5656 36.0 19.0 27.5 0.3 5665 chrX 812246 intron CG43867 - chrX 815078 intron CG43867 - chrX 817911 intron CG43867 - chrX_9_815001 chrX_815001 RAL-307_100b 4002 chrX 812256 812296 chrX 817897 817951 297 27 5652 16.0 16.5 16.2 1.6 5695 chrX 812256 intron CG43867 - chrX 815104 intron CG43867 - chrX 817951 intron CG43867 - chrX_27_815001 chrX_815001 RAL-307_100b 4003 chrX 827579 827616 chrX 835396 835403 roo 27 7814 28.5 15.0 21.8 1.2 7824 chrX 827579 intron CG43867 - chrX 831491 intron CG43867 - chrX 835403 intron CG43867 - chrX_27_830001 chrX_830001 RAL-307_100b 4004 chrX 827617 827632 chrX 835394 835449 roo 16 7806 20.5 14.0 17.2 0.9 7832 chrX 827617 intron CG43867 - chrX 831533 intron CG43867 - chrX 835449 intron CG43867 - chrX_16_830001 chrX_830001 RAL-307_100b 4005 chrX 888687 888703 chrX 888791 888801 14 104 29.0 1.5 15.2 0.9 114 chrX 888687 intron CG43867 - chrX 888744 intron CG43867 - chrX 888801 intron CG43867 - chrX_14_885001 chrX_885001 RAL-307_100b 4006 chrX 906676 906732 chrX 908490 908546 S-element 49 1811 19.5 17.5 18.5 2.5 1870 chrX 906676 intron CG43867 - chrX 907611 intron CG43867 - chrX 908546 intron CG43867 - chrX_49_905001 chrX_905001 RAL-307_100b 4007 chrX 949077 949093 chrX 19174762 19174763 4 18225677 26.0 54.0 40.0 0.1 18225686 chrX 949077 3` UTR CG3690 - chrX 10061920 intron,exon CG15312 -,Gr9a + chrX 19174763 3` UTR pncr004:X - chrX_4_10060001 chrX_10060001 RAL-307_100b 4008 chrX 949109 949128 chrX 949228 949249 13 120 11.5 23.0 17.2 0.7 140 chrX 949109 3` UTR CG3690 - chrX 949179 3` UTR CG3690 - chrX 949249 3` UTR CG3690 - chrX_13_945001 chrX_945001 RAL-307_100b 4009 chrX 1051045 1051088 chrX 1051148 1051191 36 99 27.5 23.0 25.2 1.4 146 chrX 1051045 intron CR44779 + chrX 1051118 intron CR44779 + chrX 1051191 intron CR44779 + chrX_36_1050001 chrX_1050001 RAL-307_100b 4010 chrX 1063738 1063750 chrX 1072556 1072568 roo 12 8817 25.0 14.5 19.8 0.6 8830 chrX 1063738 intron CR44779 + chrX 1068153 intron CR44779 + chrX 1072568 intron CR44779 + chrX_12_1065001 chrX_1065001 RAL-307_100b 4011 chrX 1151760 1151810 chrX 1152050 1152100 52 286 17.5 12.0 14.8 3.3 340 chrX 1151760 intergenic not near genes chrX 1151930 intergenic not near genes chrX 1152100 intergenic not near genes chrX_52_1150001 chrX_1150001 RAL-307_100b 4012 chrX 1229644 1229685 chrX 1229742 1229776 42 106 15.5 12.0 13.8 2.8 132 chrX 1229644 intron CG3638 - chrX 1229710 intron CG3638 - chrX 1229776 intron CG3638 - chrX_42_1225001 chrX_1225001 RAL-307_100b 4013 chrX 1253710 1253764 chrX 1253817 1253871 53 102 8.0 12.5 10.2 4.7 161 chrX 1253710 intron Atf3 - chrX 1253790 intron Atf3 - chrX 1253871 intron Atf3 - chrX_53_1250001 chrX_1250001 RAL-307_100b 4014 chrX 1357757 1357787 chrX 1367952 1367982 Doc 23 10193 29.5 15.0 22.2 1.0 10225 chrX 1357757 intergenic png - chrX 1362870 intergenic not near genes chrX 1367982 intergenic not near genes chrX_23_1360001 chrX_1360001 RAL-307_100b 4015 chrX 1357788 1357806 chrX 1367943 1367981 Doc 15 10190 19.5 13.0 16.2 0.9 10193 chrX 1357788 intergenic png - chrX 1362884 intergenic not near genes chrX 1367981 intergenic not near genes chrX_15_1360001 chrX_1360001 RAL-307_100b 4016 chrX 1518015 1518049 chrX 1523442 1523471 jockey 35 5425 26.5 20.0 23.2 1.4 5456 chrX 1518015 intergenic inc + chrX 1520743 intergenic not near genes chrX 1523471 intergenic not near genes chrX_35_1520001 chrX_1520001 RAL-307_100b 4017 chrX 1518051 1518068 chrX 1523437 1523495 jockey 19 5423 18.0 15.5 16.8 1.1 5444 chrX 1518051 intergenic inc + chrX 1520773 intergenic not near genes chrX 1523495 intergenic not near genes chrX_19_1520001 chrX_1520001 RAL-307_100b 4018 chrX 1559902 1559904 chrX 1560011 1560013 4 109 34.0 21.0 27.5 0.1 111 chrX 1559902 intron Mur2B - chrX 1559958 intron Mur2B - chrX 1560013 intron Mur2B - chrX_4_1555001 chrX_1555001 RAL-307_100b 4019 chrX 1559905 1559950 chrX 1560008 1560059 35 106 14.5 18.0 16.2 2.0 154 chrX 1559905 intron Mur2B - chrX 1559982 intron Mur2B - chrX 1560059 intron Mur2B - chrX_35_1555001 chrX_1555001 RAL-307_100b 4020 chrX 1626699 1626699 chrX 6738801 6738813 4 5112107 59.0 29.0 44.0 0.1 5112114 chrX 1626699 intron,intron Mur2B -,br + chrX 4182756 intron Fas2 - chrX 6738813 intron CG3168 - chrX_4_4180001 chrX_4180001 RAL-307_100b 4021 chrX 1627301 1627308 chrX 1627391 1627404 4 96 29.5 29.0 29.2 0.1 103 chrX 1627301 intron,intron Mur2B -,br + chrX 1627352 intron,intron Mur2B -,br + chrX 1627404 intron,intron Mur2B -,br + chrX_4_1625001 chrX_1625001 RAL-307_100b 4022 chrX 1627964 1627969 chrX 1635457 1635462 gtwin 5 7493 28.0 24.0 26.0 0.2 7498 chrX 1627964 intron,intron Mur2B -,br + chrX 1631713 intron,intron Mur2B -,br + chrX 1635462 intron,intron Mur2B -,br + chrX_5_1630001 chrX_1630001 RAL-307_100b 4023 chrX 1627970 1627979 chrX 1635445 1635467 gtwin 8 7485 23.0 18.0 20.5 0.4 7497 chrX 1627970 intron,intron Mur2B -,br + chrX 1631718 intron,intron Mur2B -,br + chrX 1635467 intron,intron Mur2B -,br + chrX_8_1630001 chrX_1630001 RAL-307_100b 4024 chrX 1627981 1628006 chrX 1635443 1635459 gtwin 7 7471 9.0 17.5 13.2 0.5 7478 chrX 1627981 intron,intron Mur2B -,br + chrX 1631720 intron,intron Mur2B -,br + chrX 1635459 intron,intron Mur2B -,br + chrX_7_1630001 chrX_1630001 RAL-307_100b 4025 chrX 1706832 1706835 chrX 1706933 1706936 6 101 32.0 33.5 32.8 0.2 104 chrX 1706832 intergenic not near genes chrX 1706884 intergenic not near genes chrX 1706936 intergenic not near genes chrX_6_1705001 chrX_1705001 RAL-307_100b 4026 chrX 1845712 1845758 chrX 1845835 1845850 55 123 16.5 16.0 16.2 3.2 138 chrX 1845712 intron CG42666 + chrX 1845781 intron CG42666 + chrX 1845850 intron CG42666 + chrX_55_1845001 chrX_1845001 RAL-307_100b 4027 chrX 1930514 1930542 chrX 1938110 1938135 opus 22 7594 12.5 11.0 11.8 1.7 7621 chrX 1930514 3` UTR CG11596 + chrX 1934324 intergenic not near genes chrX 1938135 3` UTR CG3857 - chrX_22_1930001 chrX_1930001 RAL-307_100b 4028 chrX 1930543 1930567 chrX 1938109 1938158 opus 19 7590 7.0 11.0 9.0 1.9 7615 chrX 1930543 intergenic CG11596 + chrX 1934350 intergenic not near genes chrX 1938158 3` UTR CG3857 - chrX_19_1930001 chrX_1930001 RAL-307_100b 4029 chrX 1954862 1954873 chrX 1962826 1962834 Stalker2 6 7964 29.0 8.0 18.5 0.3 7972 chrX 1954862 intron Hr4 + chrX 1958848 intron Hr4 + chrX 1962834 intron Hr4 + chrX_6_1955001 chrX_1955001 RAL-307_100b 4030 chrX 1954876 1954919 chrX 1962824 1962884 Stalker2 23 7947 7.0 8.0 7.5 2.7 8008 chrX 1954876 intron Hr4 + chrX 1958880 intron Hr4 + chrX 1962884 intron Hr4 + chrX_23_1955001 chrX_1955001 RAL-307_100b 4031 chrX 2023933 2023956 chrX 2024081 2024104 16 148 54.5 73.5 64.0 0.2 171 chrX 2023933 3` UTR,3` UTR east +,Actn - chrX 2024018 3` UTR,3` UTR east +,Actn - chrX 2024104 3` UTR,3` UTR east +,Actn - chrX_16_2020001 chrX_2020001 RAL-307_100b 4032 chrX 2023958 2023985 chrX 2024077 2024107 17 136 55.5 70.0 62.8 0.3 149 chrX 2023958 3` UTR,3` UTR east +,Actn - chrX 2024032 3` UTR,3` UTR east +,Actn - chrX 2024107 3` UTR,3` UTR east +,Actn - chrX_17_2020001 chrX_2020001 RAL-307_100b 4033 chrX 2020864 2020910 chrX 2025567 2025617 42 4701 107.0 60.0 83.5 0.5 4753 chrX 2020864 exon east + chrX 2023240 3` UTR east + chrX 2025617 exon Actn - chrX_42_2020001 chrX_2020001 RAL-307_100b 4034 chrX 2394271 2394280 chrX 2394368 2394387 7 104 20.0 13.5 16.8 0.4 116 chrX 2394271 intergenic not near genes chrX 2394329 intergenic not near genes chrX 2394387 intergenic not near genes chrX_7_2390001 chrX_2390001 RAL-307_100b 4035 chrX 2394282 2394307 chrX 2394366 2394414 32 104 8.5 12.0 10.2 2.9 132 chrX 2394282 intergenic not near genes chrX 2394348 intergenic not near genes chrX 2394414 intergenic not near genes chrX_32_2390001 chrX_2390001 RAL-307_100b 4036 chrX 2399819 2399836 chrX 2408191 2408207 roo 17 8374 32.0 17.5 24.8 0.7 8388 chrX 2399819 intergenic not near genes chrX 2404013 intergenic not near genes chrX 2408207 intergenic not near genes chrX_17_2400001 chrX_2400001 RAL-307_100b 4037 chrX 2399837 2399868 chrX 2408189 2408204 roo 28 8364 15.5 15.5 15.5 1.7 8367 chrX 2399837 intergenic not near genes chrX 2404020 intergenic not near genes chrX 2408204 intergenic not near genes chrX_28_2400001 chrX_2400001 RAL-307_100b 4038 chrX 2429625 2429663 chrX 2429731 2429769 13 106 0.0 10.5 5.2 2.1 144 chrX 2429625 intergenic not near genes chrX 2429697 intergenic not near genes chrX 2429769 intergenic not near genes chrX_13_2425001 chrX_2425001 RAL-307_100b 4039 chrX 2517500 2517520 chrX 12419821 12419821 4 9902312 1.0 18.5 9.8 0.4 9902321 chrX 2517500 intron trol - chrX 7468660 intergenic not near genes chrX 12419821 intergenic not near genes chrX_4_7465001 chrX_7465001 RAL-307_100b 4040 chrX 2517823 2517877 chrX 2517925 2517979 42 101 9.5 12.5 11.0 3.5 156 chrX 2517823 intron trol - chrX 2517901 intron trol - chrX 2517979 intron trol - chrX_42_2515001 chrX_2515001 RAL-307_100b 4041 chrX 2525453 2525471 chrX 2525559 2525577 11 104 25.5 14.5 20.0 0.5 124 chrX 2525453 intron trol - chrX 2525515 intron trol - chrX 2525577 intron trol - chrX_11_2525001 chrX_2525001 RAL-307_100b 4042 chrX 2525472 2525507 chrX 2525556 2525613 38 100 10.0 12.0 11.0 3.2 141 chrX 2525472 intron trol - chrX 2525542 intron trol - chrX 2525613 intron trol - chrX_38_2525001 chrX_2525001 RAL-307_100b 4043 chrX 2559335 2559389 chrX 2559448 2559502 61 109 14.5 15.5 15.0 3.8 167 chrX 2559335 intron Pdfr + chrX 2559418 intron Pdfr + chrX 2559502 intron Pdfr + chrX_61_2555001 chrX_2555001 RAL-307_100b 4044 chrX 2568183 2568226 chrX 2568441 2568479 37 265 16.0 13.5 14.8 2.3 296 chrX 2568183 intron Pdfr + chrX 2568331 intron Pdfr + chrX 2568479 intron Pdfr + chrX_37_2565001 chrX_2565001 RAL-307_100b 4045 chrX 2578791 2578802 chrX 2578905 2578919 8 115 19.5 23.0 21.2 0.4 128 chrX 2578791 intergenic Pdfr +,Vha36-3 - chrX 2578855 intergenic Pdfr +,Vha36-3 - chrX 2578919 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 RAL-307_100b 4046 chrX 2578804 2578839 chrX 2578904 2578956 34 114 15.0 23.0 19.0 1.7 152 chrX 2578804 intergenic Pdfr +,Vha36-3 - chrX 2578880 intergenic Vha36-3 -,Pdfr + chrX 2578956 intergenic Vha36-3 -,Pdfr + chrX_34_2575001 chrX_2575001 RAL-307_100b 4047 chrX 2610365 2610416 chrX 2617504 2617558 HMS-Beagle 12 7141 12.5 10.5 11.5 1.0 7193 chrX 2610365 intergenic CG8636 - chrX 2613962 intergenic not near genes chrX 2617558 intergenic Tsp3A - chrX_12_2610001 chrX_2610001 RAL-307_100b 4048 chrX 2635347 2635402 chrX 2635481 2635536 46 130 12.0 18.5 15.2 2.8 189 chrX 2635347 intron sgg + chrX 2635442 intron sgg + chrX 2635536 intron sgg + chrX_46_2635001 chrX_2635001 RAL-307_100b 4049 chrX 2638327 2638372 chrX 2638452 2638497 31 121 17.5 14.0 15.8 1.8 170 chrX 2638327 intron sgg + chrX 2638412 intron sgg + chrX 2638497 intron sgg + chrX_31_2635001 chrX_2635001 RAL-307_100b 4050 chrX 2638374 2638384 chrX 2638449 2638484 9 107 10.0 11.5 10.8 0.8 110 chrX 2638374 intron sgg + chrX 2638429 intron sgg + chrX 2638484 intron sgg + chrX_9_2635001 chrX_2635001 RAL-307_100b 4051 chrX 2664364 2664377 chrX 2665535 2665548 1360 12 1171 26.5 13.0 19.8 0.6 1184 chrX 2664364 intron sgg + chrX 2664956 intron sgg + chrX 2665548 intron sgg + chrX_12_2660001 chrX_2660001 RAL-307_100b 4052 chrX 2664379 2664396 chrX 2665533 2665567 1360 15 1168 19.0 13.0 16.0 0.9 1188 chrX 2664379 intron sgg + chrX 2664973 intron sgg + chrX 2665567 intron sgg + chrX_15_2660001 chrX_2660001 RAL-307_100b 4053 chrX 2664397 2664416 chrX 2665531 2665560 1360 19 1163 13.5 12.0 12.8 1.4 1163 chrX 2664397 intron sgg + chrX 2664978 intron sgg + chrX 2665560 intron sgg + chrX_19_2660001 chrX_2660001 RAL-307_100b 4054 chrX 2823770 2823779 chrX 2832343 2832348 roo 7 8572 24.5 16.5 20.5 0.3 8578 chrX 2823770 intron kirre + chrX 2828059 intron kirre + chrX 2832348 intron kirre + chrX_7_2825001 chrX_2825001 RAL-307_100b 4055 chrX 2844876 2844930 chrX 2852311 2852365 mdg1 38 7435 8.0 9.5 8.8 3.9 7489 chrX 2844876 intron kirre + chrX 2848620 intron kirre + chrX 2852365 intron kirre + chrX_38_2845001 chrX_2845001 RAL-307_100b 4056 chrX 2888089 2888147 chrX 2888190 2888245 40 99 21.0 16.5 18.8 2.0 156 chrX 2888089 intron kirre + chrX 2888167 intron kirre + chrX 2888245 intron kirre + chrX_40_2885001 chrX_2885001 RAL-307_100b 4057 chrX 2912172 2912173 chrX 14985240 14985245 5 12073070 60.5 20.0 40.2 0.1 12073073 chrX 2912172 intron kirre + chrX 8948708 intron rdgA + chrX 14985245 intron eag + chrX_5_8945001 chrX_8945001 RAL-307_100b 4058 chrX 3058007 3058050 chrX 3058265 3058316 pogo 33 263 7.5 15.0 11.2 2.7 309 chrX 3058007 intron kirre + chrX 3058162 intron kirre + chrX 3058316 intron kirre + chrX_33_3055001 chrX_3055001 RAL-307_100b 4059 chrX 3075609 3075661 chrX 3080941 3080961 Transpac 25 5328 12.5 15.5 14.0 1.7 5352 chrX 3075609 intron kirre + chrX 3078285 intron kirre + chrX 3080961 intron kirre + chrX_25_3075001 chrX_3075001 RAL-307_100b 4060 chrX 3206488 3206491 chrX 3206592 3206595 4 104 5.5 24.0 14.8 0.3 107 chrX 3206488 intron dnc + chrX 3206542 intron dnc + chrX 3206595 intron dnc + chrX_4_3205001 chrX_3205001 RAL-307_100b 4061 chrX 3218487 3218538 chrX 3227661 3227712 roo 13 9174 5.0 12.5 8.8 1.3 9225 chrX 3218487 intron dnc + chrX 3223100 intron dnc + chrX 3227712 intron dnc + chrX_13_3220001 chrX_3220001 RAL-307_100b 4062 chrX 3306320 3306369 chrX 3306427 3306476 22 105 12.5 3.0 7.8 2.5 156 chrX 3306320 intron dnc + chrX 3306398 intron dnc + chrX 3306476 intron dnc + chrX_22_3305001 chrX_3305001 RAL-307_100b 4063 chrX 3351783 3351803 chrX 3351894 3351914 5 108 16.5 32.5 24.5 0.2 131 chrX 3351783 intergenic not near genes chrX 3351848 intergenic not near genes chrX 3351914 intergenic not near genes chrX_5_3350001 chrX_3350001 RAL-307_100b 4064 chrX 3351804 3351812 chrX 3351890 3351905 8 94 17.0 30.5 23.8 0.3 101 chrX 3351804 intergenic not near genes chrX 3351854 intergenic not near genes chrX 3351905 intergenic not near genes chrX_8_3350001 chrX_3350001 RAL-307_100b 4065 chrX 3352737 3352747 chrX 3352851 3352861 5 114 25.5 14.5 20.0 0.2 124 chrX 3352737 intergenic not near genes chrX 3352799 intergenic not near genes chrX 3352861 intergenic not near genes chrX_5_3350001 chrX_3350001 RAL-307_100b 4066 chrX 3398352 3398378 chrX 3398455 3398481 22 101 16.5 35.0 25.8 0.8 129 chrX 3398352 intron,intron CR44999 +,CG12535 - chrX 3398416 intron,intron CR44999 +,CG12535 - chrX 3398481 intron,intron CR44999 +,CG12535 - chrX_22_3395001 chrX_3395001 RAL-307_100b 4067 chrX 3408977 3408996 chrX 3409079 3409098 16 102 0.0 19.5 9.8 1.5 121 chrX 3408977 intron,intron CR44999 +,CG12535 - chrX 3409038 intron,intron CR44999 +,CG12535 - chrX 3409098 intron,intron CR44999 +,CG12535 - chrX_16_3405001 chrX_3405001 RAL-307_100b 4068 chrX 3408998 3409018 chrX 3409065 3409120 20 99 1.5 14.5 8.0 2.2 122 chrX 3408998 intron,intron CR44999 +,CG12535 - chrX 3409059 intron,intron CR44999 +,CG12535 - chrX 3409120 intron,intron CR44999 +,CG12535 - chrX_20_3405001 chrX_3405001 RAL-307_100b 4069 chrX 3414998 3415043 chrX 3421201 3421253 3S18 28 6205 9.0 6.0 7.5 3.3 6255 chrX 3414998 intron,intron CR44999 +,CG12535 - chrX 3418126 intron,intron CR44999 +,CG12535 - chrX 3421253 intron,intron CR44999 +,CG12535 - chrX_28_3415001 chrX_3415001 RAL-307_100b 4070 chrX 3493064 3493120 chrX 3502248 3502304 roo 38 9183 16.5 7.5 12.0 2.9 9240 chrX 3493064 intron,intron CR44999 +,Gas8 - chrX 3497684 intron,intron CR44999 +,Gas8 - chrX 3502304 intron,intron CR44999 +,Gas8 - chrX_38_3495001 chrX_3495001 RAL-307_100b 4071 chrX 3597085 3597131 chrX 3597198 3597244 43 112 5.0 15.0 10.0 3.9 159 chrX 3597085 intron AstA-R1 + chrX 3597164 intron AstA-R1 + chrX 3597244 intron AstA-R1 + chrX_43_3595001 chrX_3595001 RAL-307_100b 4072 chrX 3597525 3597582 chrX 3619718 3619777 roo 30 22189 12.5 10.5 11.5 2.4 22252 chrX 3597525 intron AstA-R1 + chrX 3608651 intron AstA-R1 + chrX 3619777 intron AstA-R1 + chrX_30_3605001 chrX_3605001 RAL-307_100b 4073 chrX 3657387 3657447 chrX 3657492 3657552 53 102 14.0 11.5 12.8 3.8 165 chrX 3657387 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657552 intron AstA-R1 + chrX_53_3655001 chrX_3655001 RAL-307_100b 4074 chrX 3726743 3726790 chrX 3730165 3730212 NOF 21 3421 10.5 12.5 11.5 1.7 3469 chrX 3726743 intron tlk + chrX 3728478 intron tlk + chrX 3730212 intron tlk + chrX_21_3725001 chrX_3725001 RAL-307_100b 4075 chrX 3752388 3752408 chrX 3764762 3764766 17.6 5 12371 45.5 49.5 47.5 0.1 12378 chrX 3752388 intron tlk + chrX 3758577 intron tlk + chrX 3764766 intron tlk + chrX_5_3755001 chrX_3755001 RAL-307_100b 4076 chrX 3763529 3763581 chrX 3763835 3763887 41 304 13.5 8.5 11.0 3.4 358 chrX 3763529 intron tlk + chrX 3763708 intron tlk + chrX 3763887 intron tlk + chrX_41_3760001 chrX_3760001 RAL-307_100b 4077 chrX 3842326 3842353 chrX 3842569 3842596 pogo 18 243 14.5 10.0 12.2 1.4 270 chrX 3842326 intron ec + chrX 3842461 intron ec + chrX 3842596 intron ec + chrX_18_3840001 chrX_3840001 RAL-307_100b 4078 chrX 3880473 3880483 chrX 3880573 3880594 8 109 12.5 22.0 17.2 0.4 121 chrX 3880473 intergenic VhaAC39-1 + chrX 3880534 intergenic VhaAC39-1 + chrX 3880594 intergenic VhaAC39-1 + chrX_8_3880001 chrX_3880001 RAL-307_100b 4079 chrX 3880484 3880488 chrX 3880550 3880597 5 100 12.5 13.0 12.8 0.4 113 chrX 3880484 intergenic VhaAC39-1 + chrX 3880540 intergenic VhaAC39-1 + chrX 3880597 intergenic VhaAC39-1 + chrX_5_3880001 chrX_3880001 RAL-307_100b 4080 chrX 3881246 3881304 chrX 3881410 3881463 55 161 11.5 12.0 11.8 4.3 217 chrX 3881246 intron VhaAC39-1 + chrX 3881354 intron VhaAC39-1 + chrX 3881463 exon VhaAC39-1 + chrX_55_3880001 chrX_3880001 RAL-307_100b 4081 chrX 3891121 3891134 chrX 3891264 3891277 9 142 32.5 12.0 22.2 0.4 156 chrX 3891121 intergenic CG42541 - chrX 3891199 intergenic CG42541 - chrX 3891277 intergenic CG42541 - chrX_9_3890001 chrX_3890001 RAL-307_100b 4082 chrX 3891135 3891177 chrX 3891262 3891320 32 140 10.5 11.5 11.0 2.7 185 chrX 3891135 intergenic CG42541 - chrX 3891228 intergenic CG42541 - chrX 3891320 intergenic CG42541 - chrX_32_3890001 chrX_3890001 RAL-307_100b 4083 chrX 3922137 3922160 chrX 3922401 3922440 21 289 0.5 14.0 7.2 2.6 303 chrX 3922137 intron CG42541 - chrX 3922288 intron CG42541 - chrX 3922440 intron CG42541 - chrX_21_3920001 chrX_3920001 RAL-307_100b 4084 chrX 3930017 3930076 chrX 3930123 3930182 34 105 9.5 8.0 8.8 3.5 165 chrX 3930017 5` UTR CG42541 - chrX 3930100 5` UTR CG42541 - chrX 3930182 5` UTR CG42541 - chrX_34_3930001 chrX_3930001 RAL-307_100b 4085 chrX 3986840 3986865 chrX 3994498 3994523 412 20 7655 22.5 13.0 17.8 1.1 7683 chrX 3986840 intergenic not near genes chrX 3990682 intergenic not near genes chrX 3994523 intergenic not near genes chrX_20_3990001 chrX_3990001 RAL-307_100b 4086 chrX 3986866 3986893 chrX 3994496 3994550 412 26 7652 10.5 12.5 11.5 2.1 7684 chrX 3986866 intergenic not near genes chrX 3990708 intergenic not near genes chrX 3994550 intergenic not near genes chrX_26_3990001 chrX_3990001 RAL-307_100b 4087 chrX 4067987 4067988 chrX 10754861 10754861 5 6686874 63.5 66.5 65.0 0.1 6686874 chrX 4067987 intergenic not near genes chrX 7411424 3` UTR CG42246 - chrX 10754861 intron Rph - chrX_5_7410001 chrX_7410001 RAL-307_100b 4088 chrX 4101843 4101897 chrX 4101947 4102002 28 100 3.5 15.0 9.2 2.7 159 chrX 4101843 exon CG15375 + chrX 4101922 exon CG15375 + chrX 4102002 exon CG15375 + chrX_28_4100001 chrX_4100001 RAL-307_100b 4089 chrX 4132646 4132701 chrX 4132836 4132850 32 186 8.0 14.5 11.2 2.6 204 chrX 4132646 3` UTR GlcAT-I + chrX 4132748 3` UTR GlcAT-I + chrX 4132850 intergenic GlcAT-I +,Fas2 - chrX_32_4130001 chrX_4130001 RAL-307_100b 4090 chrX 4157877 4157890 chrX 4164955 4164960 297 8 7077 22.0 9.0 15.5 0.5 7083 chrX 4157877 intron Fas2 - chrX 4161418 intron Fas2 - chrX 4164960 intron Fas2 - chrX_8_4160001 chrX_4160001 RAL-307_100b 4091 chrX 4157891 4157912 chrX 4164962 4164985 297 13 7075 15.5 10.0 12.8 0.9 7094 chrX 4157891 intron Fas2 - chrX 4161438 intron Fas2 - chrX 4164985 intron Fas2 - chrX_13_4160001 chrX_4160001 RAL-307_100b 4092 chrX 4157914 4157923 chrX 4164956 4165000 297 4 7060 9.5 9.0 9.2 0.4 7086 chrX 4157914 intron Fas2 - chrX 4161457 intron Fas2 - chrX 4165000 intron Fas2 - chrX_4_4160001 chrX_4160001 RAL-307_100b 4093 chrX 4201978 4202036 chrX 4202080 4202139 48 99 8.5 11.0 9.8 4.4 161 chrX 4201978 intron Fas2 - chrX 4202058 intron Fas2 - chrX 4202139 intron Fas2 - chrX_48_4200001 chrX_4200001 RAL-307_100b 4094 chrX 4235722 4235742 chrX 4235872 4235894 4 151 14.5 19.0 16.8 0.2 172 chrX 4235722 intergenic not near genes chrX 4235808 intergenic not near genes chrX 4235894 intergenic not near genes chrX_4_4235001 chrX_4235001 RAL-307_100b 4095 chrX 4296100 4296147 chrX 4296201 4296248 33 100 16.0 17.0 16.5 1.9 148 chrX 4296100 intergenic not near genes chrX 4296174 intergenic not near genes chrX 4296248 intergenic not near genes chrX_33_4295001 chrX_4295001 RAL-307_100b 4096 chrX 4324368 4324415 chrX 4324469 4324517 39 100 7.0 14.5 10.8 3.3 149 chrX 4324368 intron norpA + chrX 4324442 intron norpA + chrX 4324517 intron norpA + chrX_39_4320001 chrX_4320001 RAL-307_100b 4097 chrX 4389377 4389380 chrX 12946233 12946235 10 8556856 10.5 58.0 34.2 0.3 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_10_8665001 chrX_8665001 RAL-307_100b 4098 chrX 4396949 4397006 chrX 4397059 4397116 39 108 8.5 12.5 10.5 3.4 167 chrX 4396949 intron CR32773 - chrX 4397032 intron CR32773 - chrX 4397116 intron CR32773 - chrX_39_4395001 chrX_4395001 RAL-307_100b 4099 chrX 4398302 4398312 chrX 4398410 4398413 5 107 30.5 7.0 18.8 0.3 111 chrX 4398302 intron CR32773 - chrX 4398358 intron CR32773 - chrX 4398413 intron CR32773 - chrX_5_4395001 chrX_4395001 RAL-307_100b 4100 chrX 4436440 4436497 chrX 4436541 4436605 9 93 10.0 4.0 7.0 1.1 165 chrX 4436440 intron,intron CR32773 -,bi + chrX 4436522 intron,intron CR32773 -,bi + chrX 4436605 intron,intron CR32773 -,bi + chrX_9_4435001 chrX_4435001 RAL-307_100b 4101 chrX 4468842 4468847 chrX 4468965 4468970 6 123 34.5 27.5 31.0 0.2 128 chrX 4468842 intron,intron CR32773 -,bi + chrX 4468906 intron,intron CR32773 -,bi + chrX 4468970 intron,intron CR32773 -,bi + chrX_6_4465001 chrX_4465001 RAL-307_100b 4102 chrX 4627435 4627453 chrX 4631507 4631525 14 4070 48.0 25.5 36.8 0.4 4090 chrX 4627435 3` UTR CG12184 - chrX 4629480 exon CG12184 - chrX 4631525 3` UTR CG12179 - chrX_14_4625001 chrX_4625001 RAL-307_100b 4103 chrX 4660796 4660824 chrX 4660920 4660948 17 124 19.0 0.5 9.8 1.6 152 chrX 4660796 intron CG3009 - chrX 4660872 intron CG3009 - chrX 4660948 intron CG3009 - chrX_17_4660001 chrX_4660001 RAL-307_100b 4104 chrX 4693764 4693783 chrX 4693848 4693903 20 108 0.0 6.5 3.2 4.8 139 chrX 4693764 intron ctp + chrX 4693834 intron ctp + chrX 4693903 intron ctp + chrX_20_4690001 chrX_4690001 RAL-307_100b 4105 chrX 4700374 4700384 chrX 4700742 4700752 jockey 7 368 31.0 11.0 21.0 0.3 378 chrX 4700374 3` UTR ctp + chrX 4700563 3` UTR ctp + chrX 4700752 3` UTR ctp + chrX_7_4700001 chrX_4700001 RAL-307_100b 4106 chrX 4700387 4700425 chrX 4700739 4700793 jockey 34 363 15.0 9.5 12.2 2.6 406 chrX 4700387 3` UTR ctp + chrX 4700590 3` UTR ctp + chrX 4700793 3` UTR ctp + chrX_34_4700001 chrX_4700001 RAL-307_100b 4107 chrX 4723549 4723583 chrX 4723654 4723688 32 102 23.5 19.5 21.5 1.4 139 chrX 4723549 exon Proc-R + chrX 4723618 intron Proc-R + chrX 4723688 intron Proc-R + chrX_32_4720001 chrX_4720001 RAL-307_100b 4108 chrX 4731792 4731815 chrX 4736907 4736922 jockey 10 5114 24.5 16.0 20.2 0.5 5130 chrX 4731792 intergenic not near genes chrX 4734357 intergenic not near genes chrX 4736922 intergenic not near genes chrX_10_4730001 chrX_4730001 RAL-307_100b 4109 chrX 4744134 4744172 chrX 4744257 4744278 28 122 7.0 9.0 8.0 3.1 144 chrX 4744134 intergenic not near genes chrX 4744206 intergenic not near genes chrX 4744278 intergenic not near genes chrX_28_4740001 chrX_4740001 RAL-307_100b 4110 chrX 4763232 4763242 chrX 4763745 4763755 Stalker4 7 513 29.0 16.0 22.5 0.3 523 chrX 4763232 intergenic not near genes chrX 4763494 intergenic not near genes chrX 4763755 intergenic not near genes chrX_7_4760001 chrX_4760001 RAL-307_100b 4111 chrX 4763243 4763284 chrX 4763740 4763784 Stalker4 36 508 16.0 14.0 15.0 2.2 541 chrX 4763243 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763784 intergenic not near genes chrX_36_4760001 chrX_4760001 RAL-307_100b 4112 chrX 4792355 4792379 chrX 4792813 4792834 jockey 17 457 20.0 17.0 18.5 0.9 479 chrX 4792355 intergenic not near genes chrX 4792594 intergenic not near genes chrX 4792834 intergenic not near genes chrX_17_4790001 chrX_4790001 RAL-307_100b 4113 chrX 4792380 4792410 chrX 4792812 4792822 jockey 21 452 8.0 17.0 12.5 1.6 442 chrX 4792380 intergenic not near genes chrX 4792601 intergenic not near genes chrX 4792822 intergenic not near genes chrX_21_4790001 chrX_4790001 RAL-307_100b 4114 chrX 4051229 4051252 chrX 4797116 4797117 4 745872 18.0 34.0 26.0 0.1 745888 chrX 4051229 intergenic not near genes chrX 4424173 intron,intron CR32773 -,bi + chrX 4797117 intergenic CG2861 - chrX_4_4420001 chrX_4420001 RAL-307_100b 4115 chrX 4815025 4815034 chrX 4815155 4815164 6 130 0.0 19.0 9.5 0.6 139 chrX 4815025 intergenic not near genes chrX 4815094 intergenic not near genes chrX 4815164 intergenic not near genes chrX_6_4815001 chrX_4815001 RAL-307_100b 4116 chrX 4827949 4827962 chrX 4835345 4835353 Stalker4 5 7395 33.5 12.5 23.0 0.2 7404 chrX 4827949 intergenic not near genes chrX 4831651 intergenic not near genes chrX 4835353 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-307_100b 4117 chrX 4827965 4827989 chrX 4835344 4835385 Stalker4 13 7383 17.0 11.5 14.2 0.9 7420 chrX 4827965 intergenic not near genes chrX 4831675 intergenic not near genes chrX 4835385 intergenic not near genes chrX_13_4830001 chrX_4830001 RAL-307_100b 4118 chrX 4827990 4828002 chrX 4835338 4835384 Stalker4 33 7374 14.5 10.5 12.5 2.4 7394 chrX 4827990 intergenic not near genes chrX 4831687 intergenic not near genes chrX 4835384 intergenic not near genes chrX_33_4830001 chrX_4830001 RAL-307_100b 4119 chrX 4846573 4846631 chrX 4846801 4846859 56 223 11.0 11.5 11.2 4.6 286 chrX 4846573 intron CG42594 + chrX 4846716 intron CG42594 + chrX 4846859 intron CG42594 + chrX_56_4845001 chrX_4845001 RAL-307_100b 4120 chrX 4864146 4864163 chrX 4864249 4864266 9 102 40.0 36.0 38.0 0.2 120 chrX 4864146 intron CG42594 + chrX 4864206 intron CG42594 + chrX 4864266 intron CG42594 + chrX_9_4860001 chrX_4860001 RAL-307_100b 4121 chrX 4864164 4864182 chrX 4864242 4864260 12 91 33.0 41.5 37.2 0.3 96 chrX 4864164 intron CG42594 + chrX 4864212 intron CG42594 + chrX 4864260 intron CG42594 + chrX_12_4860001 chrX_4860001 RAL-307_100b 4122 chrX 4893338 4893391 chrX 4893632 4893663 57 291 19.0 17.0 18.0 3.0 325 chrX 4893338 intron CG42594 + chrX 4893500 intron CG42594 + chrX 4893663 intron CG42594 + chrX_57_4890001 chrX_4890001 RAL-307_100b 4123 chrX 4990017 4990074 chrX 4997256 4997313 roo 26 7239 9.5 10.5 10.0 2.4 7296 chrX 4990017 intron CR44833 - chrX 4993665 intron CR44833 - chrX 4997313 intron CR44833 - chrX_26_4990001 chrX_4990001 RAL-307_100b 4124 chrX 5002037 5002086 chrX 5002148 5002190 26 109 10.0 9.0 9.5 2.5 153 chrX 5002037 intron CR44833 - chrX 5002114 intron CR44833 - chrX 5002190 intron CR44833 - chrX_26_5000001 chrX_5000001 RAL-307_100b 4125 chrX 5096256 5096269 chrX 5103841 5103859 springer 9 7587 27.0 12.0 19.5 0.4 7603 chrX 5096256 intron,intron CG15465 +,rg + chrX 5100058 intron,intron CG15465 +,rg + chrX 5103859 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-307_100b 4126 chrX 5096270 5096282 chrX 5103839 5103872 springer 8 7587 22.0 11.0 16.5 0.5 7602 chrX 5096270 intron,intron CG15465 +,rg + chrX 5100071 intron,intron CG15465 +,rg + chrX 5103872 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 RAL-307_100b 4127 chrX 5096284 5096291 chrX 5103843 5103880 springer 5 7584 20.0 12.5 16.2 0.3 7596 chrX 5096284 intron,intron CG15465 +,rg + chrX 5100082 intron,intron CG15465 +,rg + chrX 5103880 intron,intron CG15465 +,rg + chrX_5_5100001 chrX_5100001 RAL-307_100b 4128 chrX 5096292 5096306 chrX 5103839 5103881 springer 14 7577 10.0 11.0 10.5 1.2 7589 chrX 5096292 intron,intron CG15465 +,rg + chrX 5100086 intron,intron CG15465 +,rg + chrX 5103881 intron,intron CG15465 +,rg + chrX_14_5100001 chrX_5100001 RAL-307_100b 4129 chrX 5105446 5105455 chrX 5105558 5105573 5 116 18.0 17.0 17.5 0.3 127 chrX 5105446 intron,intron CG15465 +,rg + chrX 5105510 intron,intron CG15465 +,rg + chrX 5105573 intron,intron CG15465 +,rg + chrX_5_5105001 chrX_5105001 RAL-307_100b 4130 chrX 5120638 5120663 chrX 5120771 5120793 10 133 2.5 13.5 8.0 1.1 155 chrX 5120638 intron,intron CG15465 +,rg + chrX 5120716 intron,intron CG15465 +,rg + chrX 5120793 intron,intron CG15465 +,rg + chrX_10_5120001 chrX_5120001 RAL-307_100b 4131 chrX 5134787 5134800 chrX 5134913 5134926 17 125 28.5 23.5 26.0 0.6 139 chrX 5134787 intron,intron CG15465 +,rg + chrX 5134856 intron,intron CG15465 +,rg + chrX 5134926 intron,intron CG15465 +,rg + chrX_17_5130001 chrX_5130001 RAL-307_100b 4132 chrX 5134801 5134827 chrX 5134896 5134937 28 119 16.5 17.5 17.0 1.6 136 chrX 5134801 intron,intron CG15465 +,rg + chrX 5134869 intron,intron CG15465 +,rg + chrX 5134937 intron,intron CG15465 +,rg + chrX_28_5130001 chrX_5130001 RAL-307_100b 4133 chrX 5189239 5189297 chrX 5189360 5189373 48 118 10.5 10.5 10.5 4.2 134 chrX 5189239 intron,intron CG15465 +,rg + chrX 5189306 intron,intron CG15465 +,rg + chrX 5189373 intron,intron CG15465 +,rg + chrX_48_5185001 chrX_5185001 RAL-307_100b 4134 chrX 5189981 5190008 chrX 12649914 12649915 7 7459920 29.0 43.0 36.0 0.2 7459934 chrX 5189981 intron,intron CG15465 +,rg + chrX 8919948 intron,3` UTR rdgA +,CR44111 - chrX 12649915 intron Tomosyn + chrX_7_8915001 chrX_8915001 RAL-307_100b 4135 chrX 5220367 5220396 chrX 5220632 5220638 5 259 15.5 13.5 14.5 0.3 271 chrX 5220367 intron,intron CG15465 +,rg + chrX 5220502 intron,intron CG15465 +,rg + chrX 5220638 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 RAL-307_100b 4136 chrX 5272794 5272851 chrX 5272906 5272963 41 109 9.5 8.0 8.8 4.2 169 chrX 5272794 intergenic not near genes chrX 5272878 intergenic not near genes chrX 5272963 intergenic not near genes chrX_41_5270001 chrX_5270001 RAL-307_100b 4137 chrX 5291483 5291511 chrX 5291591 5291608 22 102 27.5 14.5 21.0 1.0 125 chrX 5291483 intergenic not near genes chrX 5291546 intergenic not near genes chrX 5291608 intergenic not near genes chrX_22_5290001 chrX_5290001 RAL-307_100b 4138 chrX 5323051 5323077 chrX 5323337 5323337 5 281 3.5 0.0 1.8 1.8 286 chrX 5323051 intergenic Rnp4F - chrX 5323194 intergenic Rnp4F - chrX 5323337 intergenic not near genes chrX_5_5320001 chrX_5320001 RAL-307_100b 4139 chrX 5323079 5323103 chrX 5323331 5323405 5 292 1.5 0.0 0.8 2.8 326 chrX 5323079 intergenic Rnp4F - chrX 5323242 intergenic not near genes chrX 5323405 intergenic Mcm3 + chrX_5_5320001 chrX_5320001 RAL-307_100b 4140 chrX 5338682 5338736 chrX 5339960 5339990 jockey 29 1272 11.5 9.5 10.5 2.5 1308 chrX 5338682 intergenic not near genes chrX 5339336 intergenic not near genes chrX 5339990 intergenic SK + chrX_29_5335001 chrX_5335001 RAL-307_100b 4141 chrX 5345369 5345430 chrX 5345505 5345566 39 130 1.0 10.0 5.5 6.0 197 chrX 5345369 intron SK + chrX 5345468 intron SK + chrX 5345566 intron SK + chrX_39_5345001 chrX_5345001 RAL-307_100b 4142 chrX 5349254 5349309 chrX 5349356 5349411 41 100 18.0 14.0 16.0 2.4 157 chrX 5349254 intron SK + chrX 5349332 intron SK + chrX 5349411 intron SK + chrX_41_5345001 chrX_5345001 RAL-307_100b 4143 chrX 5362839 5362885 chrX 5362958 5362962 4 109 0.0 19.0 9.5 0.4 123 chrX 5362839 intron SK + chrX 5362900 intron SK + chrX 5362962 intron SK + chrX_4_5360001 chrX_5360001 RAL-307_100b 4144 chrX 3542998 3543021 chrX 5395382 5395383 4 1852370 37.5 47.0 42.2 0.1 1852385 chrX 3542998 intron CG32791 - chrX 4469190 intron,intron CR32773 -,bi + chrX 5395383 intron SK + chrX_4_4465001 chrX_4465001 RAL-307_100b 4145 chrX 5473565 5473619 chrX 5473666 5473720 38 96 14.0 18.0 16.0 2.2 155 chrX 5473565 intron SPR + chrX 5473642 intron SPR + chrX 5473720 intron SPR + chrX_38_5470001 chrX_5470001 RAL-307_100b 4146 chrX 5512027 5512074 chrX 5512135 5512142 13 103 18.5 0.5 9.5 1.2 115 chrX 5512027 intergenic not near genes chrX 5512084 intergenic not near genes chrX 5512142 intergenic not near genes chrX_13_5510001 chrX_5510001 RAL-307_100b 4147 chrX 5517834 5517877 chrX 5517945 5517973 21 108 6.5 8.5 7.5 2.5 139 chrX 5517834 exon CG12730 + chrX 5517904 intron CG12730 + chrX 5517973 intron CG12730 + chrX_21_5515001 chrX_5515001 RAL-307_100b 4148 chrX 5524816 5524829 chrX 5528704 5528717 412 6 3887 27.0 3.5 15.2 0.4 3901 chrX 5524816 intergenic snoRNA:Psi28S-3342 - chrX 5526766 intergenic not near genes chrX 5528717 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-307_100b 4149 chrX 5524830 5524853 chrX 5528702 5528741 412 13 3885 16.5 3.5 10.0 1.2 3911 chrX 5524830 intergenic snoRNA:Psi28S-3342 - chrX 5526786 intergenic not near genes chrX 5528741 intergenic Vsx2 - chrX_13_5525001 chrX_5525001 RAL-307_100b 4150 chrX 5727402 5727415 chrX 5732164 5732179 Doc 12 4762 18.5 11.0 14.8 0.8 4777 chrX 5727402 intron CG32758 - chrX 5729790 intron CG32758 - chrX 5732179 intron CG32758 - chrX_12_5725001 chrX_5725001 RAL-307_100b 4151 chrX 5883783 5883841 chrX 5884049 5884085 pogo 46 265 12.0 12.0 12.0 3.5 302 chrX 5883783 intron CR45668 - chrX 5883934 intron CR45668 - chrX 5884085 intron CR45668 - chrX_46_5880001 chrX_5880001 RAL-307_100b 4152 chrX 5884143 5884193 chrX 5884403 5884418 pogo 36 264 11.0 10.5 10.8 3.1 275 chrX 5884143 intron CR45668 - chrX 5884280 intron CR45668 - chrX 5884418 intron CR45668 - chrX_36_5880001 chrX_5880001 RAL-307_100b 4153 chrX 5953756 5953770 chrX 5953899 5953910 12 144 27.0 21.5 24.2 0.5 154 chrX 5953756 exon CG6048 + chrX 5953833 exon CG6048 + chrX 5953910 exon CG6048 + chrX_12_5950001 chrX_5950001 RAL-307_100b 4154 chrX 6003274 6003279 chrX 6003379 6003380 4 104 23.0 23.0 23.0 0.2 106 chrX 6003274 intron CR44498 + chrX 6003327 intron CR44498 + chrX 6003380 intron CR44498 + chrX_4_6000001 chrX_6000001 RAL-307_100b 4155 chrX 6003280 6003283 chrX 6003378 6003389 6 104 23.0 22.5 22.8 0.3 109 chrX 6003280 intron CR44498 + chrX 6003334 intron CR44498 + chrX 6003389 intron CR44498 + chrX_6_6000001 chrX_6000001 RAL-307_100b 4156 chrX 6003284 6003305 chrX 6003375 6003411 22 100 19.0 21.5 20.2 1.0 127 chrX 6003284 intron CR44498 + chrX 6003348 intron CR44498 + chrX 6003411 intron CR44498 + chrX_22_6000001 chrX_6000001 RAL-307_100b 4157 chrX 6160353 6160388 chrX 6160467 6160502 22 112 5.5 9.5 7.5 2.6 149 chrX 6160353 intron Ca-alpha1T - chrX 6160428 intron Ca-alpha1T - chrX 6160502 intron Ca-alpha1T - chrX_22_6160001 chrX_6160001 RAL-307_100b 4158 chrX 6171562 6171594 chrX 6179018 6179052 Quasimodo 18 7451 20.0 12.5 16.2 1.0 7490 chrX 6171562 intron Ca-alpha1T - chrX 6175307 intron Ca-alpha1T - chrX 6179052 intron Ca-alpha1T - chrX_18_6175001 chrX_6175001 RAL-307_100b 4159 chrX 6171596 6171605 chrX 6179014 6179063 Quasimodo 6 7448 16.5 11.5 14.0 0.4 7467 chrX 6171596 intron Ca-alpha1T - chrX 6175330 intron Ca-alpha1T - chrX 6179063 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-307_100b 4160 chrX 6215325 6215371 chrX 6215433 6215479 36 107 0.5 24.5 12.5 2.7 154 chrX 6215325 intergenic not near genes chrX 6215402 intergenic not near genes chrX 6215479 intergenic not near genes chrX_36_6215001 chrX_6215001 RAL-307_100b 4161 chrX 6306526 6306580 chrX 6306628 6306682 46 97 12.5 9.5 11.0 3.8 156 chrX 6306526 3` UTR CG3823 + chrX 6306604 3` UTR CG3823 + chrX 6306682 3` UTR CG3823 + chrX_46_6305001 chrX_6305001 RAL-307_100b 4162 chrX 6313799 6313858 chrX 6313907 6313931 42 105 7.5 11.5 9.5 4.0 132 chrX 6313799 intron CG15894 + chrX 6313865 intron CG15894 + chrX 6313931 intron CG15894 + chrX_42_6310001 chrX_6310001 RAL-307_100b 4163 chrX 6335213 6335244 chrX 6337723 6337779 Tirant 22 2530 0.0 12.0 6.0 3.1 2566 chrX 6335213 intergenic not near genes chrX 6336496 intergenic not near genes chrX 6337779 5` UTR CG3842 + chrX_22_6335001 chrX_6335001 RAL-307_100b 4164 chrX 6392849 6392867 chrX 6397639 6397657 Doc 13 4788 24.5 2.5 13.5 0.9 4808 chrX 6392849 intergenic not near genes chrX 6395253 intergenic not near genes chrX 6397657 intergenic not near genes chrX_13_6395001 chrX_6395001 RAL-307_100b 4165 chrX 6392868 6392896 chrX 6397635 6397664 Doc 39 4784 11.0 2.5 6.8 5.0 4796 chrX 6392868 intergenic not near genes chrX 6395266 intergenic not near genes chrX 6397664 intergenic not near genes chrX_39_6395001 chrX_6395001 RAL-307_100b 4166 chrX 6498788 6498788 chrX 13352442 13352452 5 6853660 61.5 28.5 45.0 0.1 6853664 chrX 6498788 intron CG42340 - chrX 9925620 intergenic not near genes chrX 13352452 intergenic not near genes chrX_5_9925001 chrX_9925001 RAL-307_100b 4167 chrX 6539890 6539948 chrX 6540017 6540041 34 119 9.0 17.5 13.2 2.4 151 chrX 6539890 intergenic not near genes chrX 6539966 intergenic not near genes chrX 6540041 intergenic not near genes chrX_34_6535001 chrX_6535001 RAL-307_100b 4168 chrX 6562794 6562849 chrX 6571300 6571356 Tirant 63 8502 10.5 15.0 12.8 4.6 8562 chrX 6562794 intron CG34417 + chrX 6567075 intron CG34417 + chrX 6571356 intron CG34417 + chrX_63_6565001 chrX_6565001 RAL-307_100b 4169 chrX 6605458 6605506 chrX 6608505 6608541 Burdock 32 3045 5.0 16.0 10.5 2.8 3083 chrX 6605458 intron pigs + chrX 6607000 intron pigs + chrX 6608541 intron pigs + chrX_32_6605001 chrX_6605001 RAL-307_100b 4170 chrX 6618445 6618454 chrX 6618544 6618557 9 102 29.0 31.5 30.2 0.3 112 chrX 6618445 intron pigs + chrX 6618501 intron pigs + chrX 6618557 intron pigs + chrX_9_6615001 chrX_6615001 RAL-307_100b 4171 chrX 6618455 6618475 chrX 6618543 6618578 19 99 21.5 30.5 26.0 0.7 123 chrX 6618455 intron pigs + chrX 6618516 intron pigs + chrX 6618578 intron pigs + chrX_19_6615001 chrX_6615001 RAL-307_100b 4172 chrX 6629760 6629795 chrX 6629872 6629907 21 111 12.0 6.0 9.0 2.1 147 chrX 6629760 intron pigs + chrX 6629834 intron pigs + chrX 6629907 intron pigs + chrX_21_6625001 chrX_6625001 RAL-307_100b 4173 chrX 6733431 6733435 chrX 6733537 6733541 4 106 49.0 34.0 41.5 0.1 110 chrX 6733431 intron,intron CG3168 -,CR43461 + chrX 6733486 intron,intron CG3168 -,CR43461 + chrX 6733541 intron,intron CG3168 -,CR43461 + chrX_4_6730001 chrX_6730001 RAL-307_100b 4174 chrX 6733440 6733673 chrX 6733530 6733780 17 100 30.0 29.5 29.8 0.6 340 chrX 6733440 intron,intron CG3168 -,CR43461 + chrX 6733610 intron,intron CG3168 -,CR43461 + chrX 6733780 intron,intron CG3168 -,CR43461 + chrX_17_6730001 chrX_6730001 RAL-307_100b 4175 chrX 6737500 6737519 chrX 6737607 6737620 12 104 29.5 18.5 24.0 0.5 120 chrX 6737500 intron CG3168 - chrX 6737560 intron CG3168 - chrX 6737620 intron CG3168 - chrX_12_6735001 chrX_6735001 RAL-307_100b 4176 chrX 6737521 6737550 chrX 6737606 6737657 35 99 12.0 18.5 15.2 2.2 136 chrX 6737521 intron CG3168 - chrX 6737589 intron CG3168 - chrX 6737657 intron CG3168 - chrX_35_6735001 chrX_6735001 RAL-307_100b 4177 chrX 6746882 6746926 chrX 6747038 6747082 42 153 7.5 8.0 7.8 4.8 200 chrX 6746882 3` UTR CR44964 - chrX 6746982 3` UTR CR44964 - chrX 6747082 3` UTR CR44964 - chrX_42_6745001 chrX_6745001 RAL-307_100b 4178 chrX 6814254 6814266 chrX 6814366 6814378 11 111 9.0 0.0 4.5 2.0 124 chrX 6814254 exon iav + chrX 6814316 intron iav + chrX 6814378 intron iav + chrX_11_6810001 chrX_6810001 RAL-307_100b 4179 chrX 6859538 6859570 chrX 6859976 6859993 16 432 17.0 5.0 11.0 1.3 455 chrX 6859538 intron CG14434 - chrX 6859766 intron CG14434 - chrX 6859993 intron CG14434 - chrX_16_6855001 chrX_6855001 RAL-307_100b 4180 chrX 6897212 6897228 chrX 7441721 7441746 4 544515 25.0 32.5 28.8 0.1 544534 chrX 6897212 intergenic not near genes chrX 7169479 intron,intron CG9650 +,CR44357 - chrX 7441746 intergenic not near genes chrX_4_7165001 chrX_7165001 RAL-307_100b 4181 chrX 6897277 6897286 chrX 6897601 6897610 6 324 4.5 16.5 10.5 0.5 333 chrX 6897277 intergenic not near genes chrX 6897444 intergenic not near genes chrX 6897610 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-307_100b 4182 chrX 6897571 6897578 chrX 7243781 7243799 9 346219 16.5 11.0 13.8 0.6 346228 chrX 6897571 intergenic not near genes chrX 7070685 exon CG4607 + chrX 7243799 intron CR44357 - chrX_9_7070001 chrX_7070001 RAL-307_100b 4183 chrX 6897579 6897585 chrX 7243778 7243806 8 346218 18.0 10.0 14.0 0.5 346227 chrX 6897579 intergenic not near genes chrX 7070692 exon CG4607 + chrX 7243806 intron CR44357 - chrX_8_7070001 chrX_7070001 RAL-307_100b 4184 chrX 6897661 6897710 chrX 6897796 6897845 45 134 8.5 13.0 10.8 3.8 184 chrX 6897661 intergenic not near genes chrX 6897753 intergenic not near genes chrX 6897845 intergenic not near genes chrX_45_6895001 chrX_6895001 RAL-307_100b 4185 chrX 6901353 6901386 chrX 6901454 6901477 16 99 12.5 21.0 16.8 0.9 124 chrX 6901353 intergenic not near genes chrX 6901415 intergenic not near genes chrX 6901477 intergenic not near genes chrX_16_6900001 chrX_6900001 RAL-307_100b 4186 chrX 6901778 6901836 chrX 6901912 6901970 41 132 6.5 8.0 7.2 5.0 192 chrX 6901778 intergenic not near genes chrX 6901874 intergenic not near genes chrX 6901970 intergenic not near genes chrX_41_6900001 chrX_6900001 RAL-307_100b 4187 chrX 6989477 6989535 chrX 6989589 6989638 39 109 6.0 9.5 7.8 4.4 161 chrX 6989477 intron ogre - chrX 6989558 intron ogre - chrX 6989638 intron ogre - chrX_39_6985001 chrX_6985001 RAL-307_100b 4188 chrX 7023575 7023631 chrX 7030990 7031016 Tabor 51 7410 14.5 9.5 12.0 3.9 7441 chrX 7023575 intron CG12541 - chrX 7027296 intron CG12541 - chrX 7031016 intron CG12541 - chrX_51_7025001 chrX_7025001 RAL-307_100b 4189 chrX 7047459 7047513 chrX 7047575 7047629 30 114 12.5 10.5 11.5 2.4 170 chrX 7047459 intron CG12541 - chrX 7047544 intron CG12541 - chrX 7047629 intron CG12541 - chrX_30_7045001 chrX_7045001 RAL-307_100b 4190 chrX 7069786 7069835 chrX 7069881 7069934 30 98 13.5 10.0 11.8 2.3 148 chrX 7069786 5` UTR CG4607 + chrX 7069860 5` UTR CG4607 + chrX 7069934 5` UTR CG4607 + chrX_30_7065001 chrX_7065001 RAL-307_100b 4191 chrX 7084363 7084367 chrX 7084462 7084466 4 102 22.5 16.5 19.5 0.2 103 chrX 7084363 intron Sxl - chrX 7084414 intron Sxl - chrX 7084466 intron Sxl - chrX_4_7080001 chrX_7080001 RAL-307_100b 4192 chrX 7084369 7084403 chrX 7084460 7084467 30 91 10.0 16.0 13.0 2.1 98 chrX 7084369 intron Sxl - chrX 7084418 intron Sxl - chrX 7084467 intron Sxl - chrX_30_7080001 chrX_7080001 RAL-307_100b 4193 chrX 7097835 7097839 chrX 7097894 7097943 5 95 15.0 13.0 14.0 0.3 108 chrX 7097835 intron Sxl - chrX 7097889 intron Sxl - chrX 7097943 intron Sxl - chrX_5_7095001 chrX_7095001 RAL-307_100b 4194 chrX 7123006 7123027 chrX 7123190 7123211 11 183 40.0 19.5 29.8 0.4 205 chrX 7123006 intergenic not near genes chrX 7123108 intergenic not near genes chrX 7123211 intergenic not near genes chrX_11_7120001 chrX_7120001 RAL-307_100b 4195 chrX 7123028 7123059 chrX 7123188 7123213 26 172 21.0 17.5 19.2 1.3 185 chrX 7123028 intergenic not near genes chrX 7123120 intergenic not near genes chrX 7123213 intergenic not near genes chrX_26_7120001 chrX_7120001 RAL-307_100b 4196 chrX 7125225 7125236 chrX 7134403 7134420 roo 10 9183 2.5 11.0 6.8 1.3 9195 chrX 7125225 intergenic not near genes chrX 7129822 intergenic not near genes chrX 7134420 intergenic not near genes chrX_10_7125001 chrX_7125001 RAL-307_100b 4197 chrX 7125238 7125272 chrX 7134402 7134456 roo 28 9180 2.0 11.0 6.5 3.7 9218 chrX 7125238 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134456 intergenic not near genes chrX_28_7125001 chrX_7125001 RAL-307_100b 4198 chrX 7235534 7235542 chrX 7235645 7235654 6 112 12.5 18.5 15.5 0.4 120 chrX 7235534 intron,intron CG9650 +,CR44357 - chrX 7235594 intron,intron CG9650 +,CR44357 - chrX 7235654 intron,intron CG9650 +,CR44357 - chrX_6_7235001 chrX_7235001 RAL-307_100b 4199 chrX 7293782 7293782 chrX 13057299 13057301 9 5763518 57.0 50.0 53.5 0.2 5763519 chrX 7293782 intron,intron CR44357 -,CG1677 - chrX 10175542 intron,intron CR44894 -,CG43902 + chrX 13057301 intron rad + chrX_9_10175001 chrX_10175001 RAL-307_100b 4200 chrX 7357225 7357242 chrX 7357335 7357352 13 109 8.0 19.0 13.5 0.9 127 chrX 7357225 intron,intron CR44357 -,CG1677 - chrX 7357288 intron,intron CR44357 -,CG1677 - chrX 7357352 intron,intron CR44357 -,CG1677 - chrX_13_7355001 chrX_7355001 RAL-307_100b 4201 chrX 7470205 7470219 chrX 7470318 7470332 6 113 9.5 16.5 13.0 0.4 127 chrX 7470205 intergenic not near genes chrX 7470268 intergenic not near genes chrX 7470332 intergenic not near genes chrX_6_7470001 chrX_7470001 RAL-307_100b 4202 chrX 7470220 7470224 chrX 7470315 7470337 8 108 7.0 14.5 10.8 0.7 117 chrX 7470220 intergenic not near genes chrX 7470278 intergenic not near genes chrX 7470337 intergenic not near genes chrX_8_7470001 chrX_7470001 RAL-307_100b 4203 chrX 7679912 7679917 chrX 7680190 7680195 7 278 55.5 47.5 51.5 0.1 283 chrX 7679912 intergenic CR45666 -,CR45667 - chrX 7680054 3` UTR CR45666 - chrX 7680195 3` UTR CR45666 - chrX_7_7680001 chrX_7680001 RAL-307_100b 4204 chrX 7679918 7680134 chrX 7680188 7680206 73 117 24.5 45.5 35.0 2.0 288 chrX 7679918 intergenic CR45666 -,CR45667 - chrX 7680062 3` UTR CR45666 - chrX 7680206 3` UTR CR45666 - chrX_73_7680001 chrX_7680001 RAL-307_100b 4205 chrX 7679852 7679907 chrX 7680445 7680500 41 597 58.5 141.5 100.0 0.4 648 chrX 7679852 intergenic CR45666 -,CR45667 - chrX 7680176 3` UTR CR45666 - chrX 7680500 3` UTR CR45666 - chrX_41_7680001 chrX_7680001 RAL-307_100b 4206 chrX 7702509 7702510 chrX 7702624 7702626 4 116 0.0 36.5 18.2 0.2 117 chrX 7702509 intron CHES-1-like - chrX 7702568 intron CHES-1-like - chrX 7702626 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-307_100b 4207 chrX 7702512 7702519 chrX 7702617 7702636 5 113 0.0 35.0 17.5 0.3 124 chrX 7702512 intron CHES-1-like - chrX 7702574 intron CHES-1-like - chrX 7702636 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-307_100b 4208 chrX 7702520 7702526 chrX 7702611 7702643 11 108 1.0 29.0 15.0 0.7 123 chrX 7702520 intron CHES-1-like - chrX 7702582 intron CHES-1-like - chrX 7702643 intron CHES-1-like - chrX_11_7700001 chrX_7700001 RAL-307_100b 4209 chrX 7702881 7702918 chrX 7703345 7703382 jockey 23 462 24.5 15.0 19.8 1.1 501 chrX 7702881 intron CHES-1-like - chrX 7703132 intron CHES-1-like - chrX 7703382 intron CHES-1-like - chrX_23_7700001 chrX_7700001 RAL-307_100b 4210 chrX 7702920 7702926 chrX 7703343 7703390 jockey 9 453 21.5 14.0 17.8 0.5 470 chrX 7702920 intron CHES-1-like - chrX 7703155 intron CHES-1-like - chrX 7703390 intron CHES-1-like - chrX_9_7700001 chrX_7700001 RAL-307_100b 4211 chrX 7737135 7737186 chrX 7737242 7737293 18 106 9.0 11.5 10.2 1.6 158 chrX 7737135 5` UTR Tom40 + chrX 7737214 intron Tom40 + chrX 7737293 intron Tom40 + chrX_18_7735001 chrX_7735001 RAL-307_100b 4212 chrX 7784216 7784223 chrX 7784539 7784545 jockey 5 322 37.5 19.5 28.5 0.2 329 chrX 7784216 intergenic not near genes chrX 7784380 intergenic not near genes chrX 7784545 intergenic not near genes chrX_5_7780001 chrX_7780001 RAL-307_100b 4213 chrX 7832414 7832444 chrX 7832528 7832558 28 112 16.0 15.0 15.5 1.7 144 chrX 7832414 intron CG1402 + chrX 7832486 intron CG1402 + chrX 7832558 intron CG1402 + chrX_28_7830001 chrX_7830001 RAL-307_100b 4214 chrX 7832446 7832465 chrX 7832522 7832579 14 105 9.0 14.0 11.5 1.1 133 chrX 7832446 intron CG1402 + chrX 7832512 intron CG1402 + chrX 7832579 intron CG1402 + chrX_14_7830001 chrX_7830001 RAL-307_100b 4215 chrX 7845700 7845758 chrX 7847216 7847274 hopper2 43 1514 12.0 14.0 13.0 3.1 1574 chrX 7845700 intergenic not near genes chrX 7846487 intergenic not near genes chrX 7847274 intergenic not near genes chrX_43_7845001 chrX_7845001 RAL-307_100b 4216 chrX 7931584 7931604 chrX 7931694 7931713 12 109 11.5 17.0 14.2 0.8 129 chrX 7931584 intergenic CG10778 -,CG10777 - chrX 7931648 intergenic CG10778 -,CG10777 - chrX 7931713 intergenic CG10778 -,CG10777 - chrX_12_7930001 chrX_7930001 RAL-307_100b 4217 chrX 7968473 7968477 chrX 10884596 10884600 5 2916123 9.0 53.0 31.0 0.2 2916127 chrX 7968473 intron sn + chrX 9426536 intron mgl - chrX 10884600 intron Ork1 - chrX_5_9425001 chrX_9425001 RAL-307_100b 4218 chrX 7968522 7968528 chrX 7968674 7968682 7 154 0.0 23.0 11.5 0.6 160 chrX 7968522 intron sn + chrX 7968602 intron sn + chrX 7968682 intron sn + chrX_7_7965001 chrX_7965001 RAL-307_100b 4219 chrX 4093327 4093358 chrX 7978950 7978951 4 3885609 49.0 60.5 54.8 0.1 3885624 chrX 4093327 intergenic not near genes chrX 6036139 exon rux - chrX 7978951 intron sn + chrX_4_6035001 chrX_6035001 RAL-307_100b 4220 chrX 8024632 8024677 chrX 8024727 8024738 11 86 24.0 14.0 19.0 0.6 106 chrX 8024632 intron Tbh + chrX 8024685 intron Tbh + chrX 8024738 intron Tbh + chrX_11_8020001 chrX_8020001 RAL-307_100b 4221 chrX 8031402 8031450 chrX 8035736 8035784 Juan 24 4332 15.5 12.5 14.0 1.6 4382 chrX 8031402 intergenic not near genes chrX 8033593 intergenic not near genes chrX 8035784 3` UTR CG2233 - chrX_24_8030001 chrX_8030001 RAL-307_100b 4222 chrX 8085547 8085603 chrX 8085658 8085714 49 110 17.5 14.5 16.0 2.9 167 chrX 8085547 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085714 intron,5` UTR CG2256 -,CR45535 + chrX_49_8085001 chrX_8085001 RAL-307_100b 4223 chrX 8092265 8092321 chrX 8092375 8092391 42 106 5.5 10.5 8.0 4.7 126 chrX 8092265 intron Ubc-E2H - chrX 8092328 intron Ubc-E2H - chrX 8092391 intron Ubc-E2H - chrX_42_8090001 chrX_8090001 RAL-307_100b 4224 chrX 8232134 8232162 chrX 8232236 8232257 12 100 24.5 21.5 23.0 0.5 123 chrX 8232134 intron sdt + chrX 8232196 intron sdt + chrX 8232257 intron sdt + chrX_12_8230001 chrX_8230001 RAL-307_100b 4225 chrX 8288094 8288128 chrX 8288201 8288235 22 106 7.0 10.0 8.5 2.3 141 chrX 8288094 intron nAChRalpha3 - chrX 8288164 intron nAChRalpha3 - chrX 8288235 intron nAChRalpha3 - chrX_22_8285001 chrX_8285001 RAL-307_100b 4226 chrX 8305164 8305222 chrX 8305270 8305328 46 99 11.0 11.5 11.2 3.8 164 chrX 8305164 intron nAChRalpha3 - chrX 8305246 intron nAChRalpha3 - chrX 8305328 intron nAChRalpha3 - chrX_46_8305001 chrX_8305001 RAL-307_100b 4227 chrX 8364834 8364879 chrX 8365256 8365301 BS 22 420 10.0 21.0 15.5 1.3 467 chrX 8364834 intron nAChRalpha3 - chrX 8365068 intron nAChRalpha3 - chrX 8365301 intron nAChRalpha3 - chrX_22_8365001 chrX_8365001 RAL-307_100b 4228 chrX 8369933 8369939 chrX 8370063 8370069 4 130 35.0 10.5 22.8 0.2 136 chrX 8369933 intergenic not near genes chrX 8370001 intergenic not near genes chrX 8370069 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-307_100b 4229 chrX 8369940 8369985 chrX 8370062 8370115 37 125 16.5 10.0 13.2 2.6 175 chrX 8369940 intergenic not near genes chrX 8370028 intergenic not near genes chrX 8370115 intergenic not near genes chrX_37_8370001 chrX_8370001 RAL-307_100b 4230 chrX 8371131 8371139 chrX 8371318 8371320 4 186 30.0 4.0 17.0 0.2 189 chrX 8371131 intergenic not near genes chrX 8371226 intergenic not near genes chrX 8371320 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-307_100b 4231 chrX 8371154 8371178 chrX 8371316 8371319 13 163 10.5 3.0 6.8 1.7 165 chrX 8371154 intergenic not near genes chrX 8371236 intergenic not near genes chrX 8371319 intergenic not near genes chrX_13_8370001 chrX_8370001 RAL-307_100b 4232 chrX 8450994 8451015 chrX 8451092 8451104 17 100 13.5 33.0 23.2 0.7 110 chrX 8450994 intron org-1 - chrX 8451049 intron org-1 - chrX 8451104 exon org-1 - chrX_17_8450001 chrX_8450001 RAL-307_100b 4233 chrX 8464433 8464479 chrX 8464582 8464628 33 148 16.0 8.0 12.0 2.5 195 chrX 8464433 5` UTR Sptr - chrX 8464530 intergenic Sptr - chrX 8464628 intergenic Sptr - chrX_33_8460001 chrX_8460001 RAL-307_100b 4234 chrX 8500907 8500944 chrX 8501096 8501118 28 188 13.0 0.0 6.5 3.7 211 chrX 8500907 intron CG33181 + chrX 8501012 intron CG33181 + chrX 8501118 intron CG33181 + chrX_28_8500001 chrX_8500001 RAL-307_100b 4235 chrX 8536742 8536780 chrX 8536837 8536881 46 99 23.0 15.0 19.0 2.3 139 chrX 8536742 intron Nrg + chrX 8536812 intron Nrg + chrX 8536881 intron Nrg + chrX_46_8535001 chrX_8535001 RAL-307_100b 4236 chrX 6782971 6782990 chrX 8619666 8619666 4 1836684 50.0 48.0 49.0 0.1 1836695 chrX 6782971 exon C3G - chrX 7701318 intron CHES-1-like - chrX 8619666 intergenic not near genes chrX_4_7700001 chrX_7700001 RAL-307_100b 4237 chrX 8649433 8649486 chrX 8649578 8649626 39 143 13.0 15.5 14.2 2.6 193 chrX 8649433 intron oc - chrX 8649530 intron oc - chrX 8649626 intron oc - chrX_39_8645001 chrX_8645001 RAL-307_100b 4238 chrX 8727378 8727425 chrX 8727480 8727525 11 101 6.0 4.5 5.2 1.8 147 chrX 8727378 intergenic not near genes chrX 8727452 intergenic not near genes chrX 8727525 intergenic not near genes chrX_11_8725001 chrX_8725001 RAL-307_100b 4239 chrX 8771249 8771258 chrX 8771337 8771361 8 98 18.0 30.5 24.2 0.3 112 chrX 8771249 intron Lim1 - chrX 8771305 intron Lim1 - chrX 8771361 intron Lim1 - chrX_8_8770001 chrX_8770001 RAL-307_100b 4240 chrX 8787459 8787503 chrX 8787581 8787611 19 110 19.0 11.0 15.0 1.2 152 chrX 8787459 intron Lim1 - chrX 8787535 intron Lim1 - chrX 8787611 exon Lim1 - chrX_19_8785001 chrX_8785001 RAL-307_100b 4241 chrX 8885641 8885700 chrX 8885766 8885825 38 121 4.5 11.0 7.8 4.3 184 chrX 8885641 intron Moe - chrX 8885733 intron Moe - chrX 8885825 intron Moe - chrX_38_8885001 chrX_8885001 RAL-307_100b 4242 chrX 8922305 8922360 chrX 8922764 8922819 jockey 42 453 17.5 16.0 16.8 2.4 514 chrX 8922305 intron rdgA + chrX 8922562 intron rdgA + chrX 8922819 intron rdgA + chrX_42_8920001 chrX_8920001 RAL-307_100b 4243 chrX 8948732 8948789 chrX 8956267 8956324 roo 36 7533 4.5 10.5 7.5 4.2 7592 chrX 8948732 intron rdgA + chrX 8952528 intron rdgA + chrX 8956324 intron rdgA + chrX_36_8950001 chrX_8950001 RAL-307_100b 4244 chrX 8968842 8968851 chrX 8968943 8968953 7 102 28.0 27.0 27.5 0.2 111 chrX 8968842 intron rdgA + chrX 8968898 intron rdgA + chrX 8968953 intron rdgA + chrX_7_8965001 chrX_8965001 RAL-307_100b 4245 chrX 9058922 9058959 chrX 9059024 9059046 30 96 26.0 12.5 19.2 1.5 124 chrX 9058922 intron CG15365 - chrX 9058984 intron CG15365 - chrX 9059046 intron CG15365 - chrX_30_9055001 chrX_9055001 RAL-307_100b 4246 chrX 9218056 9218078 chrX 9218172 9218194 16 116 23.5 8.0 15.8 1.0 138 chrX 9218056 3` UTR t - chrX 9218125 3` UTR t - chrX 9218194 3` UTR t - chrX_16_9215001 chrX_9215001 RAL-307_100b 4247 chrX 9272992 9273044 chrX 9273098 9273150 32 104 12.0 11.0 11.5 2.6 158 chrX 9272992 intergenic Cfp1 -,CG16892 + chrX 9273071 intergenic Cfp1 -,CG16892 + chrX 9273150 intergenic Cfp1 -,CG16892 + chrX_32_9270001 chrX_9270001 RAL-307_100b 4248 chrX 9275973 9275996 chrX 9276107 9276130 16 134 24.0 11.5 17.8 0.9 157 chrX 9275973 3` UTR c11.1 - chrX 9276052 3` UTR c11.1 - chrX 9276130 exon c11.1 - chrX_16_9275001 chrX_9275001 RAL-307_100b 4249 chrX 9275997 9276030 chrX 9276106 9276163 34 125 10.0 11.0 10.5 3.0 166 chrX 9275997 3` UTR c11.1 - chrX 9276080 3` UTR c11.1 - chrX 9276163 exon c11.1 - chrX_34_9275001 chrX_9275001 RAL-307_100b 4250 chrX 9308809 9308833 chrX 9308919 9308943 15 107 27.0 24.5 25.8 0.6 134 chrX 9308809 intergenic not near genes chrX 9308876 intergenic not near genes chrX 9308943 intergenic not near genes chrX_15_9305001 chrX_9305001 RAL-307_100b 4251 chrX 9337915 9337973 chrX 9338032 9338090 60 113 12.0 11.0 11.5 4.8 175 chrX 9337915 intron CG34449 - chrX 9338002 intron CG34449 - chrX 9338090 exon CG34449 - chrX_60_9335001 chrX_9335001 RAL-307_100b 4252 chrX 9353357 9353367 chrX 9353450 9353474 8 105 0.0 18.5 9.2 0.8 117 chrX 9353357 intron CG34449 - chrX 9353416 intron CG34449 - chrX 9353474 intron CG34449 - chrX_8_9350001 chrX_9350001 RAL-307_100b 4253 chrX 9383998 9384016 chrX 9384062 9384072 6 78 9.0 17.5 13.2 0.4 74 chrX 9383998 intron mgl - chrX 9384035 intron mgl - chrX 9384072 intron mgl - chrX_6_9380001 chrX_9380001 RAL-307_100b 4254 chrX 9401989 9402013 chrX 9402098 9402109 13 103 26.5 12.5 19.5 0.6 120 chrX 9401989 intron mgl - chrX 9402049 intron mgl - chrX 9402109 intron mgl - chrX_13_9400001 chrX_9400001 RAL-307_100b 4255 chrX 9402024 9402032 chrX 9402101 9402141 4 101 18.5 14.0 16.2 0.2 117 chrX 9402024 intron mgl - chrX 9402082 intron mgl - chrX 9402141 intron mgl - chrX_4_9400001 chrX_9400001 RAL-307_100b 4256 chrX 9402035 9402042 chrX 9402098 9402151 17 89 14.5 12.5 13.5 1.2 116 chrX 9402035 intron mgl - chrX 9402093 intron mgl - chrX 9402151 intron mgl - chrX_17_9400001 chrX_9400001 RAL-307_100b 4257 chrX 9508114 9508127 chrX 9509657 9509670 jockey 10 1543 33.5 15.5 24.5 0.4 1556 chrX 9508114 intron CG32700 - chrX 9508892 intron CG32700 - chrX 9509670 intron CG32700 - chrX_10_9505001 chrX_9505001 RAL-307_100b 4258 chrX 9508128 9508161 chrX 9509656 9509704 jockey 25 1539 16.5 15.5 16.0 1.5 1576 chrX 9508128 intron CG32700 - chrX 9508916 intron CG32700 - chrX 9509704 intron CG32700 - chrX_25_9505001 chrX_9505001 RAL-307_100b 4259 chrX 9543372 9543426 chrX 9543476 9543530 39 103 7.5 12.0 9.8 3.6 158 chrX 9543372 intron CG32700 - chrX 9543451 intron CG32700 - chrX 9543530 intron CG32700 - chrX_39_9540001 chrX_9540001 RAL-307_100b 4260 chrX 9575768 9575779 chrX 9576117 9576128 mdg3 4 348 40.5 18.0 29.2 0.1 360 chrX 9575768 intron,exon CG32699 -,CG42395 - chrX 9575948 intron,intron CG32699 -,CG42395 - chrX 9576128 intron,exon CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-307_100b 4261 chrX 9575780 9575820 chrX 9576113 9576149 mdg3 49 340 17.5 16.0 16.8 2.8 369 chrX 9575780 intron,exon CG32699 -,CG42395 - chrX 9575964 intron,intron CG32699 -,CG42395 - chrX 9576149 intron,5` UTR CG32699 -,CG42395 - chrX_49_9575001 chrX_9575001 RAL-307_100b 4262 chrX 9636443 9636454 chrX 9636629 9636641 11 187 35.0 11.0 23.0 0.5 198 chrX 9636443 intron l(1)G0232 - chrX 9636542 intron l(1)G0232 - chrX 9636641 intron l(1)G0232 - chrX_11_9635001 chrX_9635001 RAL-307_100b 4263 chrX 9636455 9636489 chrX 9636621 9636668 31 182 15.5 9.0 12.2 2.3 213 chrX 9636455 intron l(1)G0232 - chrX 9636562 intron l(1)G0232 - chrX 9636668 intron l(1)G0232 - chrX_31_9635001 chrX_9635001 RAL-307_100b 4264 chrX 9758024 9758066 chrX 9758134 9758176 15 108 12.0 0.0 6.0 2.1 152 chrX 9758024 intergenic not near genes chrX 9758100 intergenic not near genes chrX 9758176 intergenic not near genes chrX_15_9755001 chrX_9755001 RAL-307_100b 4265 chrX 9787272 9787300 chrX 9787360 9787386 20 95 15.0 15.5 15.2 1.2 114 chrX 9787272 intron CG32698 + chrX 9787329 intron CG32698 + chrX 9787386 intron CG32698 + chrX_20_9785001 chrX_9785001 RAL-307_100b 4266 chrX 9838459 9838463 chrX 9839453 9839456 4 994 82.5 56.0 69.2 0.1 997 chrX 9838459 intron CG32698 + chrX 9838958 intron CG32698 + chrX 9839456 intron CG32698 + chrX_4_9835001 chrX_9835001 RAL-307_100b 4267 chrX 9839327 9839376 chrX 9839420 9839458 16 98 3.0 17.5 10.2 1.4 131 chrX 9839327 intron CG32698 + chrX 9839392 intron CG32698 + chrX 9839458 intron CG32698 + chrX_16_9835001 chrX_9835001 RAL-307_100b 4268 chrX 9837810 9837825 chrX 9839730 9839730 6 1913 106.0 147.0 126.5 0.0 1920 chrX 9837810 intron CG32698 + chrX 9838770 intron CG32698 + chrX 9839730 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-307_100b 4269 chrX 9837807 9837866 chrX 9839731 9839770 23 1918 125.5 143.5 134.5 0.2 1963 chrX 9837807 intron CG32698 + chrX 9838788 intron CG32698 + chrX 9839770 intron CG32698 + chrX_23_9835001 chrX_9835001 RAL-307_100b 4270 chrX 9923365 9923423 chrX 9923481 9923534 52 110 10.0 10.5 10.2 4.6 169 chrX 9923365 intergenic not near genes chrX 9923450 intergenic not near genes chrX 9923534 intergenic not near genes chrX_52_9920001 chrX_9920001 RAL-307_100b 4271 chrX 9925504 9925567 chrX 9925611 9925662 32 103 10.0 15.0 12.5 2.4 158 chrX 9925504 intergenic not near genes chrX 9925583 intergenic not near genes chrX 9925662 intergenic not near genes chrX_32_9925001 chrX_9925001 RAL-307_100b 4272 chrX 9990057 9990073 chrX 9990158 9990170 15 100 9.5 30.0 19.8 0.7 113 chrX 9990057 intron CG32694 + chrX 9990114 intron CG32694 + chrX 9990170 intron CG32694 + chrX_15_9990001 chrX_9990001 RAL-307_100b 4273 chrX 10046065 10046116 chrX 10046166 10046169 21 95 7.5 1.0 4.2 4.0 104 chrX 10046065 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX 10046117 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX 10046169 intron,3` UTR,3` UTR Cht6 +,CR45185 -,CR45219 - chrX_21_10045001 chrX_10045001 RAL-307_100b 4274 chrX 10133609 10133619 chrX 10133721 10133728 7 110 23.5 35.0 29.2 0.2 119 chrX 10133609 intron,intron RhoU +,CR44894 - chrX 10133668 intron,intron RhoU +,CR44894 - chrX 10133728 intron,intron RhoU +,CR44894 - chrX_7_10130001 chrX_10130001 RAL-307_100b 4275 chrX 10138191 10138244 chrX 10145720 10145773 412 24 7528 13.0 1.5 7.2 2.9 7582 chrX 10138191 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145773 intron,intron RhoU +,CR44894 - chrX_24_10140001 chrX_10140001 RAL-307_100b 4276 chrX 10151902 10151933 chrX 10152004 10152035 23 100 16.5 14.5 15.5 1.4 133 chrX 10151902 intron CR44894 - chrX 10151968 intron CR44894 - chrX 10152035 intron CR44894 - chrX_23_10150001 chrX_10150001 RAL-307_100b 4277 chrX 10167847 10167873 chrX 10168612 10168644 17 768 18.0 9.5 13.8 1.1 797 chrX 10167847 intron,intron CR44894 -,CG43902 + chrX 10168246 intron,intron CR44894 -,CG43902 + chrX 10168644 intron,intron CR44894 -,CG43902 + chrX_17_10165001 chrX_10165001 RAL-307_100b 4278 chrX 10216826 10216852 chrX 10216925 10216956 28 100 25.5 27.5 26.5 1.0 130 chrX 10216826 3` UTR l(1)G0230 + chrX 10216891 3` UTR l(1)G0230 + chrX 10216956 3` UTR l(1)G0230 + chrX_28_10215001 chrX_10215001 RAL-307_100b 4279 chrX 10267295 10267333 chrX 10276469 10276508 roo 18 9174 0.5 6.0 3.2 4.3 9213 chrX 10267295 3` UTR alpha-Man-I - chrX 10271902 intron alpha-Man-I - chrX 10276508 3` UTR alpha-Man-I - chrX_18_10270001 chrX_10270001 RAL-307_100b 4280 chrX 10285862 10285906 chrX 10286223 10286232 15 356 15.5 7.0 11.2 1.2 370 chrX 10285862 intron alpha-Man-I - chrX 10286047 intron alpha-Man-I - chrX 10286232 intron alpha-Man-I - chrX_15_10285001 chrX_10285001 RAL-307_100b 4281 chrX 10306031 10306042 chrX 10306146 10306157 5 113 33.5 0.0 16.8 0.3 126 chrX 10306031 intron alpha-Man-I - chrX 10306094 intron alpha-Man-I - chrX 10306157 intron alpha-Man-I - chrX_5_10305001 chrX_10305001 RAL-307_100b 4282 chrX 10306046 10306062 chrX 10306145 10306146 8 104 23.5 0.0 11.8 0.6 100 chrX 10306046 intron alpha-Man-I - chrX 10306096 intron alpha-Man-I - chrX 10306146 intron alpha-Man-I - chrX_8_10305001 chrX_10305001 RAL-307_100b 4283 chrX 10317530 10317580 chrX 10317633 10317683 33 102 10.5 8.5 9.5 3.1 153 chrX 10317530 intron alpha-Man-I - chrX 10317606 intron alpha-Man-I - chrX 10317683 intron alpha-Man-I - chrX_33_10315001 chrX_10315001 RAL-307_100b 4284 chrX 10330426 10330672 chrX 10330863 10330883 6 248 49.0 40.5 44.8 0.1 457 chrX 10330426 exon CG15306 - chrX 10330654 exon CG15306 - chrX 10330883 exon CG15306 - chrX_6_10330001 chrX_10330001 RAL-307_100b 4285 chrX 10335280 10335339 chrX 10335415 10335474 46 133 10.5 11.5 11.0 3.8 194 chrX 10335280 intron CG43740 + chrX 10335377 intron CG43740 + chrX 10335474 intron CG43740 + chrX_46_10335001 chrX_10335001 RAL-307_100b 4286 chrX 10348776 10348832 chrX 10356366 10356386 springer 25 7577 10.5 12.0 11.2 2.0 7610 chrX 10348776 intergenic snoRNA:U3:9B + chrX 10352581 intergenic not near genes chrX 10356386 intergenic l(1)G0289 - chrX_25_10350001 chrX_10350001 RAL-307_100b 4287 chrX 10440685 10440713 chrX 10440779 10440817 24 99 27.0 29.5 28.2 0.8 132 chrX 10440685 intron CG32683 - chrX 10440751 intron CG32683 - chrX 10440817 intron CG32683 - chrX_24_10440001 chrX_10440001 RAL-307_100b 4288 chrX 10550307 10550367 chrX 10550410 10550470 48 101 13.5 10.0 11.8 3.8 163 chrX 10550307 intron spri - chrX 10550388 intron spri - chrX 10550470 intron spri - chrX_48_10550001 chrX_10550001 RAL-307_100b 4289 chrX 10550831 10550839 chrX 10552323 10552331 hobo 5 1492 25.0 14.5 19.8 0.2 1500 chrX 10550831 intron spri - chrX 10551581 intron spri - chrX 10552331 intron spri - chrX_5_10550001 chrX_10550001 RAL-307_100b 4290 chrX 10550840 10550886 chrX 10552322 10552373 hobo 51 1488 15.5 14.0 14.8 3.2 1533 chrX 10550840 intron spri - chrX 10551606 intron spri - chrX 10552373 intron spri - chrX_51_10550001 chrX_10550001 RAL-307_100b 4291 chrX 10686030 10686084 chrX 10691186 10691246 roo 40 5161 9.5 6.5 8.0 4.4 5216 chrX 10686030 intron X11Lbeta + chrX 10688638 intron X11Lbeta + chrX 10691246 intron X11Lbeta + chrX_40_10685001 chrX_10685001 RAL-307_100b 4292 chrX 10772662 10772694 chrX 10772770 10772790 Tirant 22 102 13.0 8.5 10.8 1.9 128 chrX 10772662 intron CG15211 + chrX 10772726 intron CG15211 + chrX 10772790 intron CG15211 + chrX_22_10770001 chrX_10770001 RAL-307_100b 4293 chrX 10803008 10803049 chrX 10803118 10803159 32 105 20.5 19.5 20.0 1.5 151 chrX 10803008 intron Imp - chrX 10803084 intron Imp - chrX 10803159 intron Imp - chrX_32_10800001 chrX_10800001 RAL-307_100b 4294 chrX 11062421 11062430 chrX 11062541 11062550 7 119 32.5 13.5 23.0 0.3 129 chrX 11062421 exon CG1537 - chrX 11062486 intron CG1537 - chrX 11062550 intron CG1537 - chrX_7_11060001 chrX_11060001 RAL-307_100b 4295 chrX 11062431 11062475 chrX 11062539 11062595 29 117 10.5 12.5 11.5 2.3 164 chrX 11062431 exon CG1537 - chrX 11062513 intron CG1537 - chrX 11062595 intron CG1537 - chrX_29_11060001 chrX_11060001 RAL-307_100b 4296 chrX 11069140 11069183 chrX 11069308 11069313 23 165 12.5 9.5 11.0 1.9 173 chrX 11069140 intergenic not near genes chrX 11069226 intergenic not near genes chrX 11069313 intergenic not near genes chrX_23_11065001 chrX_11065001 RAL-307_100b 4297 chrX 11095976 11096017 chrX 11103103 11103144 HMS-Beagle 19 7127 12.0 11.5 11.8 1.5 7168 chrX 11095976 intergenic not near genes chrX 11099560 intergenic not near genes chrX 11103144 intron CG42249 + chrX_19_11095001 chrX_11095001 RAL-307_100b 4298 chrX 11141991 11142092 chrX 11142092 11142193 21 98 0.5 0.0 0.2 17.5 202 chrX 11141991 intergenic CG15199 - chrX 11142092 intergenic CG15199 -,CG15202 + chrX 11142193 intergenic CG15202 +,CG15199 - chrX_21_11140001 chrX_11140001 RAL-307_100b 4299 chrX 11165887 11165900 chrX 11166238 11166257 9 356 5.5 17.0 11.2 0.7 370 chrX 11165887 intergenic not near genes chrX 11166072 intergenic not near genes chrX 11166257 intergenic not near genes chrX_9_11165001 chrX_11165001 RAL-307_100b 4300 chrX 11184221 11184279 chrX 11189325 11189380 flea 16 5103 10.0 11.5 10.8 1.4 5159 chrX 11184221 intergenic not near genes chrX 11186800 intergenic not near genes chrX 11189380 intergenic not near genes chrX_16_11185001 chrX_11185001 RAL-307_100b 4301 chrX 11191873 11191921 chrX 11191985 11192033 8 112 11.0 10.0 10.5 0.7 160 chrX 11191873 intergenic not near genes chrX 11191953 intergenic not near genes chrX 11192033 intergenic not near genes chrX_8_11190001 chrX_11190001 RAL-307_100b 4302 chrX 11194455 11194461 chrX 11201865 11201867 gypsy5 5 7421 3.0 21.5 12.2 0.4 7412 chrX 11194455 intergenic not near genes chrX 11198161 intergenic not near genes chrX 11201867 intergenic CG11106 + chrX_5_11195001 chrX_11195001 RAL-307_100b 4303 chrX 11268548 11268559 chrX 11270055 11270062 hopper2 10 1515 6.0 12.5 9.2 1.0 1514 chrX 11268548 intron CG44422 - chrX 11269305 intron CG44422 - chrX 11270062 intron CG44422 - chrX_10_11265001 chrX_11265001 RAL-307_100b 4304 chrX 11268560 11268596 chrX 11270053 11270096 hopper2 31 1511 6.0 11.5 8.8 3.2 1536 chrX 11268560 intron CG44422 - chrX 11269328 intron CG44422 - chrX 11270096 intron CG44422 - chrX_31_11265001 chrX_11265001 RAL-307_100b 4305 chrX 11312040 11312079 chrX 11319410 11319457 Stalker2 28 7368 8.0 15.5 11.8 2.2 7417 chrX 11312040 intergenic not near genes chrX 11315748 intergenic not near genes chrX 11319457 intergenic not near genes chrX_28_11315001 chrX_11315001 RAL-307_100b 4306 chrX 11312081 11312088 chrX 11319409 11319451 Stalker2 10 7362 5.5 15.5 10.5 0.9 7370 chrX 11312081 intergenic not near genes chrX 11315766 intergenic not near genes chrX 11319451 intergenic not near genes chrX_10_11315001 chrX_11315001 RAL-307_100b 4307 chrX 11461865 11461876 chrX 11462274 11462285 6 409 9.0 12.0 10.5 0.5 420 chrX 11461865 intron CG43155 + chrX 11462075 intron CG43155 + chrX 11462285 intron CG43155 + chrX_6_11460001 chrX_11460001 RAL-307_100b 4308 chrX 11535024 11535046 chrX 11541519 11541541 Burdock 19 6494 25.0 20.0 22.5 0.8 6517 chrX 11535024 intron Drak + chrX 11538282 intron Drak + chrX 11541541 intron Drak + chrX_19_11535001 chrX_11535001 RAL-307_100b 4309 chrX 11558252 11558300 chrX 11558361 11558364 31 104 12.0 1.0 6.5 4.1 112 chrX 11558252 intron CG1572 - chrX 11558308 intron CG1572 - chrX 11558364 intron CG1572 - chrX_31_11555001 chrX_11555001 RAL-307_100b 4310 chrX 11633395 11633448 chrX 11640469 11640510 297 41 7075 10.5 12.5 11.5 3.3 7115 chrX 11633395 intron Ptp10D + chrX 11636952 intron Ptp10D + chrX 11640510 intron Ptp10D + chrX_41_11635001 chrX_11635001 RAL-307_100b 4311 chrX 11645084 11645140 chrX 11648278 11648302 NOF 22 3192 10.5 8.5 9.5 2.1 3218 chrX 11645084 intron Ptp10D + chrX 11646693 intron Ptp10D + chrX 11648302 intron Ptp10D + chrX_22_11645001 chrX_11645001 RAL-307_100b 4312 chrX 11719850 11719899 chrX 11719954 11720004 29 105 10.0 9.0 9.5 2.8 154 chrX 11719850 3` UTR prtp + chrX 11719927 intergenic prtp +,Tango10 + chrX 11720004 intergenic prtp +,Tango10 + chrX_29_11715001 chrX_11715001 RAL-307_100b 4313 chrX 11761992 11762004 chrX 11762091 11762107 12 102 12.5 18.5 15.5 0.7 115 chrX 11761992 intron m + chrX 11762050 intron m + chrX 11762107 intron m + chrX_12_11760001 chrX_11760001 RAL-307_100b 4314 chrX 11798991 11799038 chrX 11799102 11799149 19 110 15.0 8.0 11.5 1.5 158 chrX 11798991 intron CkIIbeta + chrX 11799070 intron CkIIbeta + chrX 11799149 intron CkIIbeta + chrX_19_11795001 chrX_11795001 RAL-307_100b 4315 chrX 11801558 11801568 chrX 11801665 11801675 9 107 20.0 3.5 11.8 0.7 117 chrX 11801558 3` UTR CkIIbeta + chrX 11801616 intergenic CkIIbeta +,Hsc70-3 - chrX 11801675 intergenic Hsc70-3 -,CkIIbeta + chrX_9_11800001 chrX_11800001 RAL-307_100b 4316 chrX 11804648 11804690 chrX 11804777 11804819 23 129 12.0 11.0 11.5 1.8 171 chrX 11804648 intron Hsc70-3 - chrX 11804734 intron Hsc70-3 - chrX 11804819 intron Hsc70-3 - chrX_23_11800001 chrX_11800001 RAL-307_100b 4317 chrX 11922343 11922383 chrX 11922496 11922541 39 157 9.0 14.5 11.8 3.0 198 chrX 11922343 exon Sclp - chrX 11922442 intron Sclp - chrX 11922541 intron Sclp - chrX_39_11920001 chrX_11920001 RAL-307_100b 4318 chrX 12094017 12094022 chrX 12094128 12094139 9 115 22.5 16.5 19.5 0.4 122 chrX 12094017 intron,intron CR43960 +,Ten-a + chrX 12094078 intron,intron CR43960 +,Ten-a + chrX 12094139 intron,intron CR43960 +,Ten-a + chrX_9_12090001 chrX_12090001 RAL-307_100b 4319 chrX 12094026 12094068 chrX 12094125 12094135 27 107 12.0 15.5 13.8 1.8 109 chrX 12094026 intron,intron CR43960 +,Ten-a + chrX 12094080 intron,intron CR43960 +,Ten-a + chrX 12094135 intron,intron CR43960 +,Ten-a + chrX_27_12090001 chrX_12090001 RAL-307_100b 4320 chrX 12168116 12168126 chrX 12173583 12173593 I-element 4 5467 19.5 5.5 12.5 0.3 5477 chrX 12168116 intron Ten-a + chrX 12170854 intron Ten-a + chrX 12173593 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-307_100b 4321 chrX 12168129 12168166 chrX 12173581 12173583 I-element 21 5462 10.5 5.0 7.8 2.4 5454 chrX 12168129 intron Ten-a + chrX 12170856 intron Ten-a + chrX 12173583 intron Ten-a + chrX_21_12170001 chrX_12170001 RAL-307_100b 4322 chrX 12184261 12184273 chrX 12184371 12184383 5 107 18.0 24.0 21.0 0.2 122 chrX 12184261 intron Ten-a + chrX 12184322 intron Ten-a + chrX 12184383 intron Ten-a + chrX_5_12180001 chrX_12180001 RAL-307_100b 4323 chrX 12184275 12184280 chrX 12184370 12184390 4 106 17.0 24.0 20.5 0.2 115 chrX 12184275 intron Ten-a + chrX 12184332 intron Ten-a + chrX 12184390 intron Ten-a + chrX_4_12180001 chrX_12180001 RAL-307_100b 4324 chrX 12191571 12191584 chrX 12191684 12191696 8 113 7.0 12.5 9.8 0.7 125 chrX 12191571 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191696 intron Ten-a + chrX_8_12190001 chrX_12190001 RAL-307_100b 4325 chrX 12246939 12246990 chrX 12247060 12247110 25 120 9.0 5.5 7.2 3.0 171 chrX 12246939 intron Ten-a + chrX 12247024 intron Ten-a + chrX 12247110 intron Ten-a + chrX_25_12245001 chrX_12245001 RAL-307_100b 4326 chrX 12301931 12301966 chrX 12303262 12303296 X-element 17 1328 7.5 9.0 8.2 1.8 1365 chrX 12301931 intron Ten-a + chrX 12302614 intron Ten-a + chrX 12303296 intron Ten-a + chrX_17_12300001 chrX_12300001 RAL-307_100b 4327 chrX 12350748 12350751 chrX 12350854 12350857 6 106 38.0 0.0 19.0 0.3 109 chrX 12350748 intergenic not near genes chrX 12350802 intergenic not near genes chrX 12350857 intergenic not near genes chrX_6_12350001 chrX_12350001 RAL-307_100b 4328 chrX 12350752 12350805 chrX 12350853 12350869 36 102 11.5 0.0 5.8 5.3 117 chrX 12350752 intergenic not near genes chrX 12350810 intergenic not near genes chrX 12350869 intergenic not near genes chrX_36_12350001 chrX_12350001 RAL-307_100b 4329 chrX 12356857 12356867 chrX 12356983 12357004 12 134 6.5 18.0 12.2 0.9 147 chrX 12356857 intergenic not near genes chrX 12356930 intergenic not near genes chrX 12357004 intergenic not near genes chrX_12_12355001 chrX_12355001 RAL-307_100b 4330 chrX 12356869 12356879 chrX 12356969 12357008 10 130 5.5 13.5 9.5 1.0 139 chrX 12356869 intergenic not near genes chrX 12356938 intergenic not near genes chrX 12357008 intergenic not near genes chrX_10_12355001 chrX_12355001 RAL-307_100b 4331 chrX 12359267 12359269 chrX 12359373 12359375 4 106 7.0 0.0 3.5 0.9 108 chrX 12359267 intergenic not near genes chrX 12359321 intergenic not near genes chrX 12359375 intergenic not near genes chrX_4_12355001 chrX_12355001 RAL-307_100b 4332 chrX 12375467 12375513 chrX 12375589 12375610 25 119 9.5 9.5 9.5 2.4 143 chrX 12375467 intergenic Ir11a - chrX 12375538 intergenic Ir11a - chrX 12375610 exon Ir11a - chrX_25_12375001 chrX_12375001 RAL-307_100b 4333 chrX 12381863 12381900 chrX 12385782 12385815 flea 8 3921 8.0 15.0 11.5 0.6 3952 chrX 12381863 intergenic not near genes chrX 12383839 intergenic not near genes chrX 12385815 intergenic not near genes chrX_8_12380001 chrX_12380001 RAL-307_100b 4334 chrX 12421213 12421237 chrX 12421323 12421347 15 109 14.0 13.0 13.5 1.0 134 chrX 12421213 intergenic not near genes chrX 12421280 intergenic not near genes chrX 12421347 intergenic not near genes chrX_15_12420001 chrX_12420001 RAL-307_100b 4335 chrX 12422867 12422907 chrX 12423000 12423040 5 133 36.0 37.0 36.5 0.1 173 chrX 12422867 intergenic not near genes chrX 12422954 intergenic not near genes chrX 12423040 intergenic not near genes chrX_5_12420001 chrX_12420001 RAL-307_100b 4336 chrX 12492975 12492987 chrX 13057293 13057295 7 564316 9.5 48.5 29.0 0.2 564320 chrX 12492975 3` UTR Lsp1alpha + chrX 12775135 3` UTR CG32647 - chrX 13057295 intron rad + chrX_7_12775001 chrX_12775001 RAL-307_100b 4337 chrX 12511300 12511351 chrX 12511407 12511460 10 107 0.0 5.5 2.8 2.6 160 chrX 12511300 intron CG2556 + chrX 12511380 intron CG2556 + chrX 12511460 intron CG2556 + chrX_10_12510001 chrX_12510001 RAL-307_100b 4338 chrX 12528840 12528885 chrX 12528941 12528987 12 97 6.5 4.5 5.5 1.8 147 chrX 12528840 intron CG43921 - chrX 12528914 intron CG43921 - chrX 12528987 intron CG43921 - chrX_12_12525001 chrX_12525001 RAL-307_100b 4339 chrX 12533769 12533817 chrX 12533871 12533918 10 100 0.5 12.0 6.2 1.4 149 chrX 12533769 intron CG43921 - chrX 12533844 intron CG43921 - chrX 12533918 intron CG43921 - chrX_10_12530001 chrX_12530001 RAL-307_100b 4340 chrX 12666324 12666327 chrX 14979307 14979310 4 2312983 50.5 26.0 38.2 0.1 2312986 chrX 12666324 intron Tis11 + chrX 13822817 intergenic Nup93-1 + chrX 14979310 intron eag + chrX_4_13820001 chrX_13820001 RAL-307_100b 4341 chrX 12701190 12701200 chrX 12701265 12701297 4 96 6.5 6.5 6.5 0.5 107 chrX 12701190 intron Smr - chrX 12701244 intron Smr - chrX 12701297 intron Smr - chrX_4_12700001 chrX_12700001 RAL-307_100b 4342 chrX 12781208 12781233 chrX 12781284 12781285 4 63 17.5 0.5 9.0 0.4 77 chrX 12781208 intron CG32647 - chrX 12781246 intron CG32647 - chrX 12781285 intron CG32647 - chrX_4_12780001 chrX_12780001 RAL-307_100b 4343 chrX 12808466 12808472 chrX 12808582 12808588 7 116 18.0 23.0 20.5 0.3 122 chrX 12808466 intron Pde9 - chrX 12808527 intron Pde9 - chrX 12808588 intron Pde9 - chrX_7_12805001 chrX_12805001 RAL-307_100b 4344 chrX 12808474 12808481 chrX 12808573 12808597 5 112 16.0 21.5 18.8 0.3 123 chrX 12808474 intron Pde9 - chrX 12808536 intron Pde9 - chrX 12808597 intron Pde9 - chrX_5_12805001 chrX_12805001 RAL-307_100b 4345 chrX 12839893 12839950 chrX 12840243 12840296 28 345 9.5 10.5 10.0 2.5 403 chrX 12839893 intron Pde9 - chrX 12840094 intron Pde9 - chrX 12840296 intron Pde9 - chrX_28_12840001 chrX_12840001 RAL-307_100b 4346 chrX 12930571 12930610 chrX 12937712 12937740 HMS-Beagle 26 7139 7.5 26.5 17.0 1.4 7169 chrX 12930571 intron fne + chrX 12934156 intron fne + chrX 12937740 intron fne + chrX_26_12930001 chrX_12930001 RAL-307_100b 4347 chrX 12946234 12946234 chrX 18572525 18572525 4 5626291 56.5 45.0 50.8 0.1 5626291 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-307_100b 4348 chrX 12953867 12953925 chrX 12954030 12954089 11 162 6.5 4.5 5.5 1.7 222 chrX 12953867 intron hec - chrX 12953978 intron hec - chrX 12954089 intron hec - chrX_11_12950001 chrX_12950001 RAL-307_100b 4349 chrX 13061335 13061345 chrX 13061471 13061481 7 135 21.5 14.5 18.0 0.4 146 chrX 13061335 intron rad + chrX 13061408 intron rad + chrX 13061481 intron rad + chrX_7_13060001 chrX_13060001 RAL-307_100b 4350 chrX 13061346 13061373 chrX 13061468 13061509 27 130 11.0 13.5 12.2 2.0 163 chrX 13061346 intron rad + chrX 13061428 intron rad + chrX 13061509 intron rad + chrX_27_13060001 chrX_13060001 RAL-307_100b 4351 chrX 13099104 13099109 chrX 13099222 13099227 4 118 0.5 14.0 7.2 0.5 123 chrX 13099104 intron CG43313 - chrX 13099166 intron CG43313 - chrX 13099227 intron CG43313 - chrX_4_13095001 chrX_13095001 RAL-307_100b 4352 chrX 13099112 13099115 chrX 13099212 13099233 5 113 0.0 11.0 5.5 0.8 121 chrX 13099112 intron CG43313 - chrX 13099172 intron CG43313 - chrX 13099233 intron CG43313 - chrX_5_13095001 chrX_13095001 RAL-307_100b 4353 chrX 13104063 13104117 chrX 13104168 13104223 29 103 8.5 0.0 4.2 5.6 160 chrX 13104063 intron CG43313 - chrX 13104143 intron CG43313 - chrX 13104223 intron CG43313 - chrX_29_13100001 chrX_13100001 RAL-307_100b 4354 chrX 13147855 13147910 chrX 13147962 13148017 41 106 12.5 12.0 12.2 3.1 162 chrX 13147855 intron CG32645 + chrX 13147936 intron CG32645 + chrX 13148017 intron CG32645 + chrX_41_13145001 chrX_13145001 RAL-307_100b 4355 chrX 13168547 13168573 chrX 13168673 13168699 12 124 6.5 11.5 9.0 1.2 152 chrX 13168547 intron CG34411 - chrX 13168623 intron CG34411 - chrX 13168699 intron CG34411 - chrX_12_13165001 chrX_13165001 RAL-307_100b 4356 chrX 13172324 13172383 chrX 13172425 13172484 40 98 11.5 11.0 11.2 3.3 160 chrX 13172324 exon CG34411 - chrX 13172404 intron CG34411 - chrX 13172484 intron CG34411 - chrX_40_13170001 chrX_13170001 RAL-307_100b 4357 chrX 13210010 13210064 chrX 13210135 13210151 9 116 13.5 14.0 13.8 0.6 141 chrX 13210010 intron sno - chrX 13210080 intron sno - chrX 13210151 intron sno - chrX_9_13210001 chrX_13210001 RAL-307_100b 4358 chrX 13236854 13236901 chrX 13236961 13237011 17 109 1.0 10.5 5.8 2.5 157 chrX 13236854 intron mew - chrX 13236932 intron mew - chrX 13237011 intron mew - chrX_17_13235001 chrX_13235001 RAL-307_100b 4359 chrX 13272153 13272166 chrX 13272255 13272257 8 100 25.5 19.0 22.2 0.3 104 chrX 13272153 intron HDAC4 - chrX 13272205 intron HDAC4 - chrX 13272257 intron HDAC4 - chrX_8_13270001 chrX_13270001 RAL-307_100b 4360 chrX 13272167 13272181 chrX 13272254 13272283 16 96 18.5 19.0 18.8 0.8 116 chrX 13272167 intron HDAC4 - chrX 13272225 intron HDAC4 - chrX 13272283 intron HDAC4 - chrX_16_13270001 chrX_13270001 RAL-307_100b 4361 chrX 13278134 13278182 chrX 13278241 13278265 29 106 12.0 13.0 12.5 2.1 131 chrX 13278134 intron HDAC4 - chrX 13278200 intron HDAC4 - chrX 13278265 intron HDAC4 - chrX_29_13275001 chrX_13275001 RAL-307_100b 4362 chrX 13280114 13280125 chrX 13280302 13280313 7 187 33.0 6.5 19.8 0.3 199 chrX 13280114 intron HDAC4 - chrX 13280214 intron HDAC4 - chrX 13280313 intron HDAC4 - chrX_7_13280001 chrX_13280001 RAL-307_100b 4363 chrX 13280127 13280163 chrX 13280301 13280306 16 177 14.0 6.0 10.0 1.5 179 chrX 13280127 intron HDAC4 - chrX 13280216 intron HDAC4 - chrX 13280306 intron HDAC4 - chrX_16_13280001 chrX_13280001 RAL-307_100b 4364 chrX 13329305 13329310 chrX 13329424 13329429 7 119 8.0 4.0 6.0 1.0 124 chrX 13329305 intergenic IP3K2 + chrX 13329367 intergenic IP3K2 +,Jafrac1 + chrX 13329429 intergenic IP3K2 +,Jafrac1 + chrX_7_13325001 chrX_13325001 RAL-307_100b 4365 chrX 13329311 13329361 chrX 13329415 13329472 13 116 0.0 4.0 2.0 4.3 161 chrX 13329311 intergenic IP3K2 + chrX 13329392 intergenic IP3K2 +,Jafrac1 + chrX 13329472 intergenic IP3K2 +,Jafrac1 + chrX_13_13325001 chrX_13325001 RAL-307_100b 4366 chrX 13374817 13374837 chrX 13374922 13374942 15 105 26.5 11.0 18.8 0.8 125 chrX 13374817 intron CG1640 + chrX 13374880 intron CG1640 + chrX 13374942 intron CG1640 + chrX_15_13370001 chrX_13370001 RAL-307_100b 4367 chrX 13374844 13374867 chrX 13374919 13374965 25 97 12.5 9.0 10.8 2.1 121 chrX 13374844 intron CG1640 + chrX 13374904 intron CG1640 + chrX 13374965 intron CG1640 + chrX_25_13370001 chrX_13370001 RAL-307_100b 4368 chrX 13401459 13401516 chrX 13401836 13401893 jockey 16 376 8.0 7.5 7.8 1.8 434 chrX 13401459 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401893 3` UTR CG12725 - chrX_16_13400001 chrX_13400001 RAL-307_100b 4369 chrX 13421448 13421461 chrX 13421550 13421570 13 107 0.0 10.0 5.0 2.2 122 chrX 13421448 intergenic Set2 + chrX 13421509 intergenic Set2 + chrX 13421570 intergenic not near genes chrX_13_13420001 chrX_13420001 RAL-307_100b 4370 chrX 13429469 13429483 chrX 13430638 13430657 jockey 11 1173 0.0 30.0 15.0 0.7 1188 chrX 13429469 intergenic not near genes chrX 13430063 intergenic not near genes chrX 13430657 intergenic not near genes chrX_11_13430001 chrX_13430001 RAL-307_100b 4371 chrX 13429487 13429491 chrX 13430622 13430659 jockey 5 1164 0.0 22.0 11.0 0.4 1172 chrX 13429487 intergenic not near genes chrX 13430073 intergenic not near genes chrX 13430659 intergenic not near genes chrX_5_13430001 chrX_13430001 RAL-307_100b 4372 chrX 13443396 13443406 chrX 13443492 13443500 6 92 35.5 33.0 34.2 0.2 104 chrX 13443396 intergenic not near genes chrX 13443448 intergenic not near genes chrX 13443500 intergenic not near genes chrX_6_13440001 chrX_13440001 RAL-307_100b 4373 chrX 13443407 13443410 chrX 13443489 13443511 4 93 32.5 32.5 32.5 0.1 104 chrX 13443407 intergenic not near genes chrX 13443459 intergenic not near genes chrX 13443511 intergenic not near genes chrX_4_13440001 chrX_13440001 RAL-307_100b 4374 chrX 13443412 13443418 chrX 13443488 13443510 10 87 31.5 30.5 31.0 0.3 98 chrX 13443412 intergenic not near genes chrX 13443461 intergenic not near genes chrX 13443510 intergenic not near genes chrX_10_13440001 chrX_13440001 RAL-307_100b 4375 chrX 13463625 13463676 chrX 13469222 13469278 mdg3 33 5601 10.0 8.5 9.2 3.2 5653 chrX 13463625 intron Neto + chrX 13466452 intron Neto + chrX 13469278 intron Neto + chrX_33_13465001 chrX_13465001 RAL-307_100b 4376 chrX 13507288 13507340 chrX 13507392 13507439 29 100 4.0 14.5 9.2 2.8 151 chrX 13507288 intron Neto + chrX 13507364 intron Neto + chrX 13507439 intron Neto + chrX_29_13505001 chrX_13505001 RAL-307_100b 4377 chrX 13550467 13550483 chrX 13550574 13550590 13 107 7.0 0.5 3.8 2.7 123 chrX 13550467 intergenic not near genes chrX 13550528 intergenic not near genes chrX 13550590 intergenic not near genes chrX_13_13550001 chrX_13550001 RAL-307_100b 4378 chrX 13734070 13734110 chrX 13734191 13734213 33 118 15.0 19.5 17.2 1.8 143 chrX 13734070 intron g - chrX 13734142 intron g - chrX 13734213 intron g - chrX_33_13730001 chrX_13730001 RAL-307_100b 4379 chrX 13839469 13839482 chrX 13839570 13839585 5 102 25.0 15.5 20.2 0.2 116 chrX 13839469 intron AMPdeam - chrX 13839527 intron AMPdeam - chrX 13839585 intron AMPdeam - chrX_5_13835001 chrX_13835001 RAL-307_100b 4380 chrX 13875958 13875981 chrX 13876067 13876083 16 107 8.5 0.5 4.5 2.9 125 chrX 13875958 intron mamo - chrX 13876020 intron mamo - chrX 13876083 intron mamo - chrX_16_13875001 chrX_13875001 RAL-307_100b 4381 chrX 13908783 13908793 chrX 13908886 13908891 6 102 23.0 32.5 27.8 0.2 108 chrX 13908783 intron mamo - chrX 13908837 intron mamo - chrX 13908891 intron mamo - chrX_6_13905001 chrX_13905001 RAL-307_100b 4382 chrX 13908794 13908809 chrX 13908875 13908887 8 85 15.0 27.5 21.2 0.4 93 chrX 13908794 intron mamo - chrX 13908840 intron mamo - chrX 13908887 intron mamo - chrX_8_13905001 chrX_13905001 RAL-307_100b 4383 chrX 13934272 13934316 chrX 13934376 13934424 26 108 7.5 10.0 8.8 2.7 152 chrX 13934272 intron mamo - chrX 13934348 intron mamo - chrX 13934424 intron mamo - chrX_26_13930001 chrX_13930001 RAL-307_100b 4384 chrX 13937954 13938001 chrX 13941250 13941271 I-element 26 3292 7.5 7.0 7.2 3.2 3317 chrX 13937954 intron mamo - chrX 13939612 intron mamo - chrX 13941271 intron mamo - chrX_26_13935001 chrX_13935001 RAL-307_100b 4385 chrX 13057299 13057304 chrX 13966949 13966949 6 909648 50.0 33.0 41.5 0.1 909650 chrX 13057299 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_6_13510001 chrX_13510001 RAL-307_100b 4386 chrX 13975847 13975907 chrX 13975950 13975996 26 100 0.5 6.0 3.2 6.2 149 chrX 13975847 intron mamo - chrX 13975922 intron mamo - chrX 13975996 intron mamo - chrX_26_13975001 chrX_13975001 RAL-307_100b 4387 chrX 14030725 14030778 chrX 14035336 14035374 copia 4 4607 0.0 8.0 4.0 0.8 4649 chrX 14030725 intergenic not near genes chrX 14033050 intergenic not near genes chrX 14035374 intergenic not near genes chrX_4_14030001 chrX_14030001 RAL-307_100b 4388 chrX 14104999 14105049 chrX 14114173 14114225 roo 40 9173 10.5 14.5 12.5 3.0 9226 chrX 14104999 intergenic not near genes chrX 14109612 intergenic not near genes chrX 14114225 5` UTR CR44657 + chrX_40_14105001 chrX_14105001 RAL-307_100b 4389 chrX 14118431 14118489 chrX 14118546 14118576 25 108 3.5 4.5 4.0 5.0 145 chrX 14118431 intergenic not near genes chrX 14118504 intergenic not near genes chrX 14118576 intergenic not near genes chrX_25_14115001 chrX_14115001 RAL-307_100b 4390 chrX 14131455 14131518 chrX 14131568 14131617 36 97 14.5 16.0 15.2 2.2 162 chrX 14131455 intergenic not near genes chrX 14131536 intergenic not near genes chrX 14131617 intergenic not near genes chrX_36_14130001 chrX_14130001 RAL-307_100b 4391 chrX 14143374 14143431 chrX 14143480 14143537 50 104 10.0 7.5 8.8 5.1 163 chrX 14143374 intergenic not near genes chrX 14143456 intergenic not near genes chrX 14143537 intergenic not near genes chrX_50_14140001 chrX_14140001 RAL-307_100b 4392 chrX 14157571 14157602 chrX 14163253 14163269 297 17 5678 15.0 7.0 11.0 1.4 5698 chrX 14157571 intergenic not near genes chrX 14160420 intergenic not near genes chrX 14163269 intergenic not near genes chrX_17_14160001 chrX_14160001 RAL-307_100b 4393 chrX 14164911 14164915 chrX 20133110 20133120 4 5968204 41.5 10.5 26.0 0.1 5968209 chrX 14164911 intergenic not near genes chrX 17149016 5` UTR CG5010 + chrX 20133120 intergenic CG15322 + chrX_4_17145001 chrX_17145001 RAL-307_100b 4394 chrX 14209446 14209489 chrX 14209555 14209587 40 114 11.0 15.5 13.2 2.8 141 chrX 14209446 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209516 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209587 intron,intron l(1)G0007 +,l(1)G0469 - chrX_40_14205001 chrX_14205001 RAL-307_100b 4395 chrX 14226784 14226821 chrX 14232042 14232076 20 5248 89.5 72.0 80.8 0.2 5292 chrX 14226784 exon mRpL38 + chrX 14229430 exon CG42271 - chrX 14232076 exon CG42271 - chrX_20_14225001 chrX_14225001 RAL-307_100b 4396 chrX 14333266 14333317 chrX 14333373 14333403 36 100 4.0 11.5 7.8 4.1 137 chrX 14333266 intron dpr8 + chrX 14333334 intron dpr8 + chrX 14333403 intron dpr8 + chrX_36_14330001 chrX_14330001 RAL-307_100b 4397 chrX 14404990 14405026 chrX 14405093 14405129 26 103 12.5 9.5 11.0 2.2 139 chrX 14404990 intron dpr8 + chrX 14405060 intron dpr8 + chrX 14405129 intron dpr8 + chrX_26_14405001 chrX_14405001 RAL-307_100b 4398 chrX 14416282 14416316 chrX 14421075 14421109 F-element 17 4792 9.0 11.0 10.0 1.5 4827 chrX 14416282 intron dpr8 + chrX 14418696 intron dpr8 + chrX 14421109 intron dpr8 + chrX_17_14415001 chrX_14415001 RAL-307_100b 4399 chrX 14484959 14484983 chrX 14485069 14485096 23 112 0.0 15.5 7.8 2.6 137 chrX 14484959 intergenic not near genes chrX 14485028 intergenic not near genes chrX 14485096 intergenic not near genes chrX_23_14485001 chrX_14485001 RAL-307_100b 4400 chrX 14487796 14487815 chrX 14487915 14487935 4 117 16.0 3.5 9.8 0.4 139 chrX 14487796 intergenic not near genes chrX 14487866 intergenic not near genes chrX 14487935 intergenic not near genes chrX_4_14485001 chrX_14485001 RAL-307_100b 4401 chrX 14487818 14487853 chrX 14487914 14487973 38 112 9.0 3.5 6.2 5.3 155 chrX 14487818 intergenic not near genes chrX 14487896 intergenic not near genes chrX 14487973 intergenic not near genes chrX_38_14485001 chrX_14485001 RAL-307_100b 4402 chrX 14508435 14508472 chrX 14508595 14508634 14 155 8.5 17.0 12.8 1.0 199 chrX 14508435 intergenic not near genes chrX 14508534 intergenic not near genes chrX 14508634 intergenic not near genes chrX_14_14505001 chrX_14505001 RAL-307_100b 4403 chrX 14589695 14589707 chrX 14589925 14589951 pogo 5 249 9.0 1.0 5.0 0.8 256 chrX 14589695 intron CG9413 - chrX 14589823 intron CG9413 - chrX 14589951 intron CG9413 - chrX_5_14585001 chrX_14585001 RAL-307_100b 4404 chrX 14597725 14597739 chrX 14597822 14597841 8 101 0.5 14.0 7.2 1.0 116 chrX 14597725 intron CG9413 - chrX 14597783 intron CG9413 - chrX 14597841 intron CG9413 - chrX_8_14595001 chrX_14595001 RAL-307_100b 4405 chrX 14597741 14597751 chrX 14597818 14597842 8 90 0.5 11.0 5.8 1.2 101 chrX 14597741 intron CG9413 - chrX 14597792 intron CG9413 - chrX 14597842 intron CG9413 - chrX_8_14595001 chrX_14595001 RAL-307_100b 4406 chrX 14628173 14628216 chrX 14628273 14628332 32 110 12.0 6.0 9.0 3.2 159 chrX 14628173 intron NetA - chrX 14628252 intron NetA - chrX 14628332 intron NetA - chrX_32_14625001 chrX_14625001 RAL-307_100b 4407 chrX 14636440 14636480 chrX 14641906 14641946 I-element 22 5462 16.5 16.0 16.2 1.3 5506 chrX 14636440 intron NetA - chrX 14639193 intron NetA - chrX 14641946 intron NetA - chrX_22_14635001 chrX_14635001 RAL-307_100b 4408 chrX 14636482 14636489 chrX 14641898 14641954 I-element 10 5451 13.0 12.5 12.8 0.7 5472 chrX 14636482 intron NetA - chrX 14639218 intron NetA - chrX 14641954 intron NetA - chrX_10_14635001 chrX_14635001 RAL-307_100b 4409 chrX 14740315 14740331 chrX 14740416 14740442 14 110 1.0 19.5 10.2 1.2 127 chrX 14740315 intron NetB - chrX 14740378 intron NetB - chrX 14740442 intron NetB - chrX_14_14740001 chrX_14740001 RAL-307_100b 4410 chrX 14740333 14740353 chrX 14740412 14740464 13 108 1.0 18.0 9.5 1.2 131 chrX 14740333 intron NetB - chrX 14740398 intron NetB - chrX 14740464 intron NetB - chrX_13_14740001 chrX_14740001 RAL-307_100b 4411 chrX 14778014 14778053 chrX 14782836 14782875 Doc 25 4821 17.0 15.0 16.0 1.5 4861 chrX 14778014 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782875 intergenic Ag5r2 - chrX_25_14780001 chrX_14780001 RAL-307_100b 4412 chrX 14806732 14806782 chrX 14806845 14806874 31 112 9.0 0.0 4.5 5.6 142 chrX 14806732 intron rut - chrX 14806803 intron rut - chrX 14806874 intron rut - chrX_31_14805001 chrX_14805001 RAL-307_100b 4413 chrX 14810167 14810175 chrX 14810270 14810278 6 103 9.0 3.5 6.2 0.8 111 chrX 14810167 intron rut - chrX 14810222 intron rut - chrX 14810278 intron rut - chrX_6_14810001 chrX_14810001 RAL-307_100b 4414 chrX 14813710 14813765 chrX 14813813 14813868 42 101 10.0 8.5 9.2 4.1 158 chrX 14813710 intron rut - chrX 14813789 intron rut - chrX 14813868 intron rut - chrX_42_14810001 chrX_14810001 RAL-307_100b 4415 chrX 14818738 14818797 chrX 14823966 14823999 copia 39 5220 12.5 10.5 11.5 3.1 5261 chrX 14818738 intron rut - chrX 14821368 intron rut - chrX 14823999 intron rut - chrX_39_14820001 chrX_14820001 RAL-307_100b 4416 chrX 14936818 14936890 chrX 14946114 14946172 roo 33 9289 0.5 10.0 5.2 5.3 9354 chrX 14936818 intron pdgy - chrX 14941495 intron pdgy - chrX 14946172 intron pdgy - chrX_33_14940001 chrX_14940001 RAL-307_100b 4417 chrX 14950046 14950071 chrX 14950145 14950151 7 98 21.5 0.5 11.0 0.6 105 chrX 14950046 intron pdgy - chrX 14950098 intron pdgy - chrX 14950151 intron pdgy - chrX_7_14950001 chrX_14950001 RAL-307_100b 4418 chrX 14968049 14968098 chrX 14968152 14968192 28 100 0.5 17.0 8.8 2.9 143 chrX 14968049 intron eag + chrX 14968120 intron eag + chrX 14968192 intron eag + chrX_28_14965001 chrX_14965001 RAL-307_100b 4419 chrX 14974824 14974844 chrX 14974931 14974961 6 115 11.0 28.0 19.5 0.3 137 chrX 14974824 intron eag + chrX 14974892 intron eag + chrX 14974961 intron eag + chrX_6_14970001 chrX_14970001 RAL-307_100b 4420 chrX 12666324 12666325 chrX 14979229 14979270 5 2312922 50.5 48.5 49.5 0.1 2312946 chrX 12666324 intron Tis11 + chrX 13822797 intergenic Nup93-1 +,Clic - chrX 14979270 intron eag + chrX_5_13820001 chrX_13820001 RAL-307_100b 4421 chrX 2912171 2912173 chrX 14985241 14985243 5 12073069 60.5 20.5 40.5 0.1 12073072 chrX 2912171 intron kirre + chrX 8948707 intron rdgA + chrX 14985243 intron eag + chrX_5_8945001 chrX_8945001 RAL-307_100b 4422 chrX 13718741 13718744 chrX 15019092 15019098 4 1300352 42.0 62.0 52.0 0.1 1300357 chrX 13718741 3` UTR CG9941 - chrX 14368920 intron dpr8 + chrX 15019098 intron hiw - chrX_4_14365001 chrX_14365001 RAL-307_100b 4423 chrX 15059149 15059204 chrX 15059280 15059335 11 127 6.5 8.0 7.2 1.3 186 chrX 15059149 exon hiw - chrX 15059242 intron hiw - chrX 15059335 intron hiw - chrX_11_15055001 chrX_15055001 RAL-307_100b 4424 chrX 15212240 15212285 chrX 15212367 15212412 64 123 17.0 13.0 15.0 4.0 172 chrX 15212240 intergenic not near genes chrX 15212326 intergenic not near genes chrX 15212412 intergenic not near genes chrX_64_15210001 chrX_15210001 RAL-307_100b 4425 chrX 15209689 15209747 chrX 15212749 15212802 45 3058 105.0 94.0 99.5 0.4 3113 chrX 15209689 intergenic not near genes chrX 15211246 exon CG5662 + chrX 15212802 intergenic not near genes chrX_45_15210001 chrX_15210001 RAL-307_100b 4426 chrX 15228480 15228524 chrX 15228746 15228795 22 268 8.0 8.0 8.0 2.4 315 chrX 15228480 intergenic CG9101 - chrX 15228638 intergenic CG9101 - chrX 15228795 3` UTR CG9101 - chrX_22_15225001 chrX_15225001 RAL-307_100b 4427 chrX 15248237 15248293 chrX 15248338 15248389 28 97 7.0 5.0 6.0 4.0 152 chrX 15248237 intergenic not near genes chrX 15248313 intergenic not near genes chrX 15248389 intergenic not near genes chrX_28_15245001 chrX_15245001 RAL-307_100b 4428 chrX 15265855 15265868 chrX 15265963 15265976 7 107 31.0 28.5 29.8 0.2 121 chrX 15265855 intergenic not near genes chrX 15265916 intergenic not near genes chrX 15265976 intergenic not near genes chrX_7_15265001 chrX_15265001 RAL-307_100b 4429 chrX 15273694 15273708 chrX 15274876 15274885 1360 16 1184 43.0 23.5 33.2 0.5 1191 chrX 15273694 intergenic not near genes chrX 15274290 intergenic not near genes chrX 15274885 intergenic not near genes chrX_16_15270001 chrX_15270001 RAL-307_100b 4430 chrX 15273709 15273739 chrX 15274868 15274916 1360 31 1178 21.0 16.5 18.8 1.6 1207 chrX 15273709 intergenic not near genes chrX 15274312 intergenic not near genes chrX 15274916 intergenic not near genes chrX_31_15270001 chrX_15270001 RAL-307_100b 4431 chrX 15277610 15277667 chrX 15277720 15277777 42 107 11.5 17.0 14.2 2.8 167 chrX 15277610 intergenic not near genes chrX 15277694 intergenic not near genes chrX 15277777 intergenic not near genes chrX_42_15275001 chrX_15275001 RAL-307_100b 4432 chrX 15287588 15287599 chrX 15287698 15287709 6 110 8.5 0.0 4.2 1.2 121 chrX 15287588 intergenic not near genes chrX 15287648 intergenic not near genes chrX 15287709 intergenic not near genes chrX_6_15285001 chrX_15285001 RAL-307_100b 4433 chrX 15369803 15369859 chrX 15369911 15369964 32 108 7.5 14.5 11.0 2.7 161 chrX 15369803 intron acj6 - chrX 15369884 intron acj6 - chrX 15369964 intron acj6 - chrX_32_15365001 chrX_15365001 RAL-307_100b 4434 chrX 15413031 15413045 chrX 15417358 15417372 Juan 16 4325 33.0 1.0 17.0 0.9 4341 chrX 15413031 intron Cngl - chrX 15415202 intron Cngl - chrX 15417372 intron Cngl - chrX_16_15415001 chrX_15415001 RAL-307_100b 4435 chrX 15413046 15413082 chrX 15417355 15417358 Juan 25 4316 22.5 1.0 11.8 2.0 4312 chrX 15413046 intron Cngl - chrX 15415202 intron Cngl - chrX 15417358 intron Cngl - chrX_25_15415001 chrX_15415001 RAL-307_100b 4436 chrX 15421905 15421952 chrX 15423431 15423484 pogo 18 1534 6.0 10.0 8.0 2.0 1579 chrX 15421905 intron Cngl - chrX 15422694 intron Cngl - chrX 15423484 intron Cngl - chrX_18_15420001 chrX_15420001 RAL-307_100b 4437 chrX 15435691 15435702 chrX 15436115 15436143 rover 18 452 0.5 14.0 7.2 2.2 452 chrX 15435691 intron Cngl - chrX 15435917 intron Cngl - chrX 15436143 intron Cngl - chrX_18_15435001 chrX_15435001 RAL-307_100b 4438 chrX 15519774 15519831 chrX 15519877 15519934 39 100 10.0 9.5 9.8 3.6 160 chrX 15519774 intron Ac13E - chrX 15519854 intron Ac13E - chrX 15519934 exon Ac13E - chrX_39_15515001 chrX_15515001 RAL-307_100b 4439 chrX 15536679 15536703 chrX 15536775 15536785 18 96 29.5 35.0 32.2 0.5 106 chrX 15536679 intron Ac13E - chrX 15536732 intron Ac13E - chrX 15536785 intron Ac13E - chrX_18_15535001 chrX_15535001 RAL-307_100b 4440 chrX 15565610 15565667 chrX 15565721 15565778 29 110 9.0 10.0 9.5 2.8 168 chrX 15565610 intergenic not near genes chrX 15565694 intergenic not near genes chrX 15565778 intergenic not near genes chrX_29_15565001 chrX_15565001 RAL-307_100b 4441 chrX 15589434 15589436 chrX 15589638 15589640 4 204 22.5 30.5 26.5 0.1 206 chrX 15589434 intron CG9220 - chrX 15589537 intron CG9220 - chrX 15589640 exon CG9220 - chrX_4_15585001 chrX_15585001 RAL-307_100b 4442 chrX 15589437 15589457 chrX 15589636 15589661 15 202 16.5 29.0 22.8 0.6 224 chrX 15589437 intron CG9220 - chrX 15589549 intron CG9220 - chrX 15589661 exon CG9220 - chrX_15_15585001 chrX_15585001 RAL-307_100b 4443 chrX 8125437 8125440 chrX 15658692 15658695 4 7533255 0.0 0.0 0.0 4.0 7533258 chrX 8125437 intron cyr - chrX 11892066 exon sicily + chrX 15658695 intergenic not near genes chrX_4_11890001 chrX_11890001 RAL-307_100b 4444 chrX 15669857 15669903 chrX 15669971 15670017 28 113 7.0 7.5 7.2 3.4 160 chrX 15669857 intron CG15646 - chrX 15669937 intron CG15646 - chrX 15670017 intron CG15646 - chrX_28_15665001 chrX_15665001 RAL-307_100b 4445 chrX 15680476 15680493 chrX 15680589 15680600 7 108 0.0 0.0 0.0 7.0 124 chrX 15680476 intergenic not near genes chrX 15680538 intergenic not near genes chrX 15680600 intergenic not near genes chrX_7_15680001 chrX_15680001 RAL-307_100b 4446 chrX 15681374 15681385 chrX 15681481 15681492 9 106 25.0 6.5 15.8 0.5 118 chrX 15681374 intergenic not near genes chrX 15681433 intergenic not near genes chrX 15681492 intergenic not near genes chrX_9_15680001 chrX_15680001 RAL-307_100b 4447 chrX 15681386 15681423 chrX 15681480 15681514 20 103 10.0 6.0 8.0 2.2 128 chrX 15681386 intergenic not near genes chrX 15681450 intergenic not near genes chrX 15681514 intergenic not near genes chrX_20_15680001 chrX_15680001 RAL-307_100b 4448 chrX 15696650 15696695 chrX 15696814 15696844 27 159 9.5 11.0 10.2 2.4 194 chrX 15696650 intergenic not near genes chrX 15696747 intergenic not near genes chrX 15696844 intergenic not near genes chrX_27_15695001 chrX_15695001 RAL-307_100b 4449 chrX 15750845 15750898 chrX 15750965 15751006 34 117 9.5 8.0 8.8 3.5 161 chrX 15750845 exon CG8239 + chrX 15750926 exon CG8239 + chrX 15751006 3` UTR CG8239 + chrX_34_15750001 chrX_15750001 RAL-307_100b 4450 chrX 15954811 15954816 chrX 15954980 15954985 4 169 40.5 59.5 50.0 0.1 174 chrX 15954811 intron mmd - chrX 15954898 intron mmd - chrX 15954985 intron mmd - chrX_4_15950001 chrX_15950001 RAL-307_100b 4451 chrX 15967276 15967279 chrX 15967393 15967396 5 117 0.0 0.0 0.0 5.0 120 chrX 15967276 intron mmd - chrX 15967336 intron mmd - chrX 15967396 intron mmd - chrX_5_15965001 chrX_15965001 RAL-307_100b 4452 chrX 16100535 16100541 chrX 16100639 16100644 5 103 25.5 11.5 18.5 0.3 109 chrX 16100535 intron,intron CG42353 -,CG42354 - chrX 16100590 intron,intron CG42353 -,CG42354 - chrX 16100644 intron,intron CG42353 -,CG42354 - chrX_5_16100001 chrX_16100001 RAL-307_100b 4453 chrX 16100543 16100591 chrX 16100637 16100696 14 102 6.5 9.0 7.8 1.6 153 chrX 16100543 intron,intron CG42353 -,CG42354 - chrX 16100620 intron,intron CG42353 -,CG42354 - chrX 16100696 intron,intron CG42353 -,CG42354 - chrX_14_16100001 chrX_16100001 RAL-307_100b 4454 chrX 16160274 16160303 chrX 16160375 16160401 9 101 5.5 8.0 6.8 1.2 127 chrX 16160274 intergenic not near genes chrX 16160338 intergenic not near genes chrX 16160401 intergenic not near genes chrX_9_16160001 chrX_16160001 RAL-307_100b 4455 chrX 16222762 16222807 chrX 16231132 16231182 roo 25 8374 2.5 6.0 4.2 4.8 8420 chrX 16222762 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231182 intergenic not near genes chrX_25_16225001 chrX_16225001 RAL-307_100b 4456 chrX 16245928 16245962 chrX 16246060 16246094 INE-1 30 131 14.5 3.5 9.0 3.0 166 chrX 16245928 intergenic not near genes chrX 16246011 intergenic not near genes chrX 16246094 intergenic not near genes chrX_30_16245001 chrX_16245001 RAL-307_100b 4457 chrX 16253847 16253858 chrX 16253959 16253970 9 111 0.0 15.5 7.8 1.0 123 chrX 16253847 intergenic snRNA:U5:14B - chrX 16253908 intergenic snRNA:U5:14B - chrX 16253970 intergenic snRNA:U5:14B - chrX_9_16250001 chrX_16250001 RAL-307_100b 4458 chrX 16295500 16295550 chrX 16295609 16295634 19 107 6.5 0.0 3.2 4.5 134 chrX 16295500 intron CG9911 - chrX 16295567 intron CG9911 - chrX 16295634 intron CG9911 - chrX_19_16295001 chrX_16295001 RAL-307_100b 4459 chrX 16329437 16329444 chrX 16329521 16329552 8 97 0.0 22.0 11.0 0.7 115 chrX 16329437 intron CG9919 - chrX 16329494 intron CG9919 - chrX 16329552 exon CG9919 - chrX_8_16325001 chrX_16325001 RAL-307_100b 4460 chrX 16329445 16329449 chrX 16329514 16329557 7 90 0.0 20.0 10.0 0.6 112 chrX 16329445 intron CG9919 - chrX 16329501 intron CG9919 - chrX 16329557 exon CG9919 - chrX_7_16325001 chrX_16325001 RAL-307_100b 4461 chrX 16340645 16340696 chrX 16349825 16349878 roo 19 9178 1.5 12.5 7.0 2.4 9233 chrX 16340645 intergenic Dsp1 + chrX 16345262 intergenic not near genes chrX 16349878 intergenic sl + chrX_19_16345001 chrX_16345001 RAL-307_100b 4462 chrX 16408104 16408113 chrX 16408206 16408215 5 102 31.0 27.5 29.2 0.2 111 chrX 16408104 intron CG4301 + chrX 16408160 intron CG4301 + chrX 16408215 intron CG4301 + chrX_5_16405001 chrX_16405001 RAL-307_100b 4463 chrX 16437586 16437640 chrX 16437696 16437753 28 111 9.0 10.5 9.8 2.6 167 chrX 16437586 3` UTR,3` UTR hang +,CG9947 - chrX 16437670 3` UTR,3` UTR hang +,CG9947 - chrX 16437753 3` UTR,3` UTR hang +,CG9947 - chrX_28_16435001 chrX_16435001 RAL-307_100b 4464 chrX 16492620 16492675 chrX 16498222 16498277 mdg3 56 5600 16.0 12.0 14.0 3.7 5657 chrX 16492620 intron para - chrX 16495448 intron para - chrX 16498277 exon para - chrX_56_16495001 chrX_16495001 RAL-307_100b 4465 chrX 16645708 16645716 chrX 16645808 16645817 4 101 24.0 15.0 19.5 0.2 109 chrX 16645708 intron mthl1 + chrX 16645762 intron mthl1 + chrX 16645817 intron mthl1 + chrX_4_16645001 chrX_16645001 RAL-307_100b 4466 chrX 16689599 16689656 chrX 16689710 16689745 49 104 8.0 12.5 10.2 4.4 146 chrX 16689599 intron Sep4 - chrX 16689672 intron Sep4 - chrX 16689745 intron Sep4 - chrX_49_16685001 chrX_16685001 RAL-307_100b 4467 chrX 16700507 16700558 chrX 16700614 16700657 16 106 0.0 10.0 5.0 2.7 150 chrX 16700507 intron,3` UTR CG4678 +,spheroide - chrX 16700582 intron,3` UTR CG4678 +,spheroide - chrX 16700657 intron,3` UTR CG4678 +,spheroide - chrX_16_16700001 chrX_16700001 RAL-307_100b 4468 chrX 16707975 16707976 chrX 16708134 16708135 4 159 0.0 13.5 6.8 0.5 160 chrX 16707975 intron CG4678 + chrX 16708055 intron CG4678 + chrX 16708135 intron CG4678 + chrX_4_16705001 chrX_16705001 RAL-307_100b 4469 chrX 16766694 16766733 chrX 16766784 16766826 31 97 12.0 14.0 13.0 2.2 132 chrX 16766694 intron if - chrX 16766760 intron if - chrX 16766826 intron if - chrX_31_16765001 chrX_16765001 RAL-307_100b 4470 chrX 16821210 16821255 chrX 16821315 16821361 12 105 11.5 0.0 5.8 1.8 151 chrX 16821210 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821361 intron CG4829 + chrX_12_16820001 chrX_16820001 RAL-307_100b 4471 chrX 16870054 16870097 chrX 16870161 16870205 24 104 8.5 12.0 10.2 2.1 151 chrX 16870054 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870205 intron CG13003 - chrX_24_16870001 chrX_16870001 RAL-307_100b 4472 chrX 16880120 16880163 chrX 16880241 16880279 12 116 13.0 22.0 17.5 0.6 159 chrX 16880120 intergenic not near genes chrX 16880200 intergenic not near genes chrX 16880279 intergenic not near genes chrX_12_16880001 chrX_16880001 RAL-307_100b 4473 chrX 16898073 16898114 chrX 16898178 16898214 16 104 22.0 9.0 15.5 1.0 141 chrX 16898073 intergenic not near genes chrX 16898144 intergenic not near genes chrX 16898214 intergenic not near genes chrX_16_16895001 chrX_16895001 RAL-307_100b 4474 chrX 16906622 16906679 chrX 16906734 16906791 29 110 10.0 11.0 10.5 2.5 169 chrX 16906622 intron CR44754 - chrX 16906706 intron CR44754 - chrX 16906791 intron CR44754 - chrX_29_16905001 chrX_16905001 RAL-307_100b 4475 chrX 16936001 16936028 chrX 16936424 16936471 jockey 13 440 11.5 14.0 12.8 0.9 470 chrX 16936001 intron CG4928 + chrX 16936236 intron CG4928 + chrX 16936471 intron CG4928 + chrX_13_16935001 chrX_16935001 RAL-307_100b 4476 chrX 16983076 16983076 chrX 19404963 19404965 7 2421888 42.5 50.0 46.2 0.1 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_7_18190001 chrX_18190001 RAL-307_100b 4477 chrX 1053117 1053117 chrX 16983077 16983077 4 15929960 70.0 46.5 58.2 0.1 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-307_100b 4478 chrX 16983077 16983077 chrX 19404963 19404965 9 2421886 42.5 50.0 46.2 0.2 2421888 chrX 16983077 intron CG45002 - chrX 18194021 intron Frq2 + chrX 19404965 intron kek5 + chrX_9_18190001 chrX_18190001 RAL-307_100b 4479 chrX 17011946 17011999 chrX 17012047 17012102 44 102 10.0 10.5 10.2 3.9 156 chrX 17011946 intron CG45002 - chrX 17012024 intron CG45002 - chrX 17012102 intron CG45002 - chrX_44_17010001 chrX_17010001 RAL-307_100b 4480 chrX 17052907 17052917 chrX 17053013 17053023 5 105 0.0 0.0 0.0 5.0 116 chrX 17052907 intron CG45002 - chrX 17052965 intron CG45002 - chrX 17053023 intron CG45002 - chrX_5_17050001 chrX_17050001 RAL-307_100b 4481 chrX 17057915 17057963 chrX 17058176 17058229 pogo 12 264 3.0 8.0 5.5 1.8 314 chrX 17057915 intron CG45002 - chrX 17058072 intron CG45002 - chrX 17058229 intron CG45002 - chrX_12_17055001 chrX_17055001 RAL-307_100b 4482 chrX 17088188 17088198 chrX 17088806 17088816 4 616 4.5 20.5 12.5 0.3 628 chrX 17088188 intergenic not near genes chrX 17088502 intergenic not near genes chrX 17088816 intergenic not near genes chrX_4_17085001 chrX_17085001 RAL-307_100b 4483 chrX 17100144 17100174 chrX 17100281 17100311 23 136 17.5 7.5 12.5 1.7 167 chrX 17100144 intron CG4991 + chrX 17100228 intron CG4991 + chrX 17100311 intron CG4991 + chrX_23_17100001 chrX_17100001 RAL-307_100b 4484 chrX 17112248 17112251 chrX 17112340 17112358 6 104 0.0 25.5 12.8 0.4 110 chrX 17112248 intron CG5004 + chrX 17112303 intron CG5004 + chrX 17112358 intron CG5004 + chrX_6_17110001 chrX_17110001 RAL-307_100b 4485 chrX 17195180 17195191 chrX 17200291 17200302 flea 10 5111 34.0 11.0 22.5 0.4 5122 chrX 17195180 3` UTR baz + chrX 17197741 3` UTR baz + chrX 17200302 3` UTR baz + chrX_10_17195001 chrX_17195001 RAL-307_100b 4486 chrX 17195200 17195232 chrX 17200288 17200333 flea 33 5107 14.5 9.5 12.0 2.5 5133 chrX 17195200 3` UTR baz + chrX 17197766 3` UTR baz + chrX 17200333 3` UTR baz + chrX_33_17195001 chrX_17195001 RAL-307_100b 4487 chrX 17205823 17205858 chrX 17205938 17205973 28 113 6.5 15.0 10.8 2.4 150 chrX 17205823 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205973 intergenic CG32564 + chrX_28_17205001 chrX_17205001 RAL-307_100b 4488 chrX 17229930 17229965 chrX 17230058 17230093 26 127 16.0 12.5 14.2 1.7 163 chrX 17229930 intergenic CG10597 - chrX 17230012 intergenic CG10597 - chrX 17230093 intergenic CG10597 - chrX_26_17230001 chrX_17230001 RAL-307_100b 4489 chrX 17234236 17234240 chrX 17234355 17234359 5 118 39.0 0.5 19.8 0.2 123 chrX 17234236 intron f + chrX 17234298 intron f + chrX 17234359 intron f + chrX_5_17230001 chrX_17230001 RAL-307_100b 4490 chrX 17234241 17234270 chrX 17234353 17234364 14 114 24.0 0.5 12.2 1.1 123 chrX 17234241 intron f + chrX 17234302 intron f + chrX 17234364 intron f + chrX_14_17230001 chrX_17230001 RAL-307_100b 4491 chrX 17237511 17237532 chrX 17237620 17237638 12 108 17.0 15.0 16.0 0.7 127 chrX 17237511 intron f + chrX 17237574 intron f + chrX 17237638 intron f + chrX_12_17235001 chrX_17235001 RAL-307_100b 4492 chrX 17275508 17275565 chrX 17275606 17275647 40 95 12.5 16.5 14.5 2.6 139 chrX 17275508 intron f + chrX 17275578 intron f + chrX 17275647 intron f + chrX_40_17275001 chrX_17275001 RAL-307_100b 4493 chrX 17325702 17325739 chrX 17325827 17325877 14 132 0.0 9.5 4.8 2.4 175 chrX 17325702 intergenic not near genes chrX 17325790 intergenic not near genes chrX 17325877 intergenic not near genes chrX_14_17325001 chrX_17325001 RAL-307_100b 4494 chrX 17431331 17431392 chrX 17431697 17431718 jockey 11 362 10.5 14.0 12.2 0.8 387 chrX 17431331 intron CG12994 - chrX 17431524 intron CG12994 - chrX 17431718 intron CG12994 - chrX_11_17430001 chrX_17430001 RAL-307_100b 4495 chrX 17443098 17443103 chrX 17443246 17443252 6 149 11.0 0.0 5.5 0.9 154 chrX 17443098 intron CG12994 - chrX 17443175 intron CG12994 - chrX 17443252 intron CG12994 - chrX_6_17440001 chrX_17440001 RAL-307_100b 4496 chrX 17479922 17479935 chrX 17480011 17480036 7 98 23.0 26.5 24.8 0.3 114 chrX 17479922 intron CG43658 - chrX 17479979 intron CG43658 - chrX 17480036 intron CG43658 - chrX_7_17475001 chrX_17475001 RAL-307_100b 4497 chrX 17502034 17502333 chrX 17502272 17502438 43 216 19.5 14.0 16.8 2.4 404 chrX 17502034 intron CG43658 - chrX 17502236 intron CG43658 - chrX 17502438 intron CG43658 - chrX_43_17500001 chrX_17500001 RAL-307_100b 4498 chrX 17502334 17502371 chrX 17502434 17502476 27 104 14.0 16.0 15.0 1.7 142 chrX 17502334 intron CG43658 - chrX 17502405 intron CG43658 - chrX 17502476 intron CG43658 - chrX_27_17500001 chrX_17500001 RAL-307_100b 4499 chrX 17544986 17545033 chrX 17545093 17545140 38 104 14.5 14.0 14.2 2.5 154 chrX 17544986 intron CG43658 - chrX 17545063 intron CG43658 - chrX 17545140 intron CG43658 - chrX_38_17545001 chrX_17545001 RAL-307_100b 4500 chrX 17546947 17547002 chrX 17547105 17547160 19 157 6.5 10.0 8.2 2.1 213 chrX 17546947 intron CG43658 - chrX 17547054 intron CG43658 - chrX 17547160 intron CG43658 - chrX_19_17545001 chrX_17545001 RAL-307_100b 4501 chrX 17556920 17556929 chrX 17557444 17557453 mdg1 5 524 36.5 12.5 24.5 0.2 533 chrX 17556920 intron CG43658 - chrX 17557186 intron CG43658 - chrX 17557453 intron CG43658 - chrX_5_17555001 chrX_17555001 RAL-307_100b 4502 chrX 17556930 17556964 chrX 17557442 17557453 mdg1 9 518 20.0 12.5 16.2 0.5 523 chrX 17556930 intron CG43658 - chrX 17557192 intron CG43658 - chrX 17557453 intron CG43658 - chrX_9_17555001 chrX_17555001 RAL-307_100b 4503 chrX 8787596 8787636 chrX 17634277 17634277 4 8846655 47.5 33.0 40.2 0.1 8846681 chrX 8787596 intron Lim1 - chrX 13210936 intron sno - chrX 17634277 3` UTR CG8289 - chrX_4_13210001 chrX_13210001 RAL-307_100b 4504 chrX 17685434 17685472 chrX 17685542 17685580 17 106 7.5 11.5 9.5 1.6 146 chrX 17685434 intron chas - chrX 17685507 intron chas - chrX 17685580 intron chas - chrX_17_17685001 chrX_17685001 RAL-307_100b 4505 chrX 17716561 17716604 chrX 17716672 17716716 22 106 12.0 13.0 12.5 1.6 155 chrX 17716561 intron CG42684 + chrX 17716638 intron CG42684 + chrX 17716716 intron CG42684 + chrX_22_17715001 chrX_17715001 RAL-307_100b 4506 chrX 17726445 17726458 chrX 17726534 17726562 4 98 12.0 23.0 17.5 0.2 117 chrX 17726445 intron CG42684 + chrX 17726504 intron CG42684 + chrX 17726562 intron CG42684 + chrX_4_17725001 chrX_17725001 RAL-307_100b 4507 chrX 17731092 17731129 chrX 17731193 17731230 34 100 12.0 18.5 15.2 2.1 138 chrX 17731092 intron CG42684 + chrX 17731161 intron CG42684 + chrX 17731230 intron CG42684 + chrX_34_17730001 chrX_17730001 RAL-307_100b 4508 chrX 17740349 17740406 chrX 17740450 17740493 39 92 13.0 13.0 13.0 2.8 144 chrX 17740349 intron CG42684 + chrX 17740421 intron CG42684 + chrX 17740493 intron CG42684 + chrX_39_17740001 chrX_17740001 RAL-307_100b 4509 chrX 17784455 17784487 chrX 17784556 17784588 11 100 1.0 7.0 4.0 2.2 133 chrX 17784455 intergenic not near genes chrX 17784522 intergenic not near genes chrX 17784588 intergenic not near genes chrX_11_17780001 chrX_17780001 RAL-307_100b 4510 chrX 17792934 17792975 chrX 17796255 17796295 flea 25 3321 13.5 13.0 13.2 1.8 3361 chrX 17792934 intron OdsH + chrX 17794614 intron OdsH + chrX 17796295 intron OdsH + chrX_25_17790001 chrX_17790001 RAL-307_100b 4511 chrX 17867023 17867068 chrX 17867124 17867169 32 99 22.0 13.0 17.5 1.7 146 chrX 17867023 intron mnb - chrX 17867096 intron mnb - chrX 17867169 intron mnb - chrX_32_17865001 chrX_17865001 RAL-307_100b 4512 chrX 17939700 17939725 chrX 17939842 17939869 22 143 13.5 17.5 15.5 1.3 169 chrX 17939700 intergenic Sh - chrX 17939784 3` UTR Sh - chrX 17939869 3` UTR Sh - chrX_22_17935001 chrX_17935001 RAL-307_100b 4513 chrX 18132025 18132079 chrX 18132133 18132187 40 105 11.5 17.0 14.2 2.6 162 chrX 18132025 3` UTR ari-1 - chrX 18132106 3` UTR ari-1 - chrX 18132187 3` UTR ari-1 - chrX_40_18130001 chrX_18130001 RAL-307_100b 4514 chrX 18148611 18148624 chrX 18148739 18148752 7 128 13.0 7.0 10.0 0.6 141 chrX 18148611 intergenic not near genes chrX 18148682 intergenic not near genes chrX 18148752 intergenic not near genes chrX_7_18145001 chrX_18145001 RAL-307_100b 4515 chrX 18177003 18177044 chrX 18177121 18177162 22 116 9.5 5.0 7.2 2.7 159 chrX 18177003 intergenic not near genes chrX 18177082 intergenic not near genes chrX 18177162 intergenic Frq2 + chrX_22_18175001 chrX_18175001 RAL-307_100b 4516 chrX 18427355 18427402 chrX 18427791 18427838 34 435 17.5 13.0 15.2 2.1 483 chrX 18427355 intergenic CG42323 + chrX 18427596 intergenic not near genes chrX 18427838 intergenic not near genes chrX_34_18425001 chrX_18425001 RAL-307_100b 4517 chrX 18429469 18429526 chrX 18434804 18434850 Transpac 38 5334 16.0 8.5 12.2 2.9 5381 chrX 18429469 intergenic not near genes chrX 18432160 intergenic not near genes chrX 18434850 intergenic not near genes chrX_38_18430001 chrX_18430001 RAL-307_100b 4518 chrX 18486085 18486134 chrX 18486199 18486228 43 109 18.5 18.5 18.5 2.2 143 chrX 18486085 exon psh - chrX 18486156 intron psh - chrX 18486228 intron psh - chrX_43_18485001 chrX_18485001 RAL-307_100b 4519 chrX 18490019 18490028 chrX 18490199 18490208 6 180 30.0 14.5 22.2 0.3 189 chrX 18490019 intergenic CG15046 - chrX 18490114 intergenic CG15046 - chrX 18490208 intergenic not near genes chrX_6_18490001 chrX_18490001 RAL-307_100b 4520 chrX 18490029 18490055 chrX 18490198 18490235 17 177 14.0 14.0 14.0 1.1 206 chrX 18490029 intergenic CG15046 - chrX 18490132 intergenic not near genes chrX 18490235 intergenic not near genes chrX_17_18490001 chrX_18490001 RAL-307_100b 4521 chrX 18529370 18529399 chrX 18529471 18529500 22 100 13.0 10.0 11.5 1.8 130 chrX 18529370 intron,3` UTR Bx +,CG15047 + chrX 18529435 intron,3` UTR Bx +,CG15047 + chrX 18529500 intron,3` UTR Bx +,CG15047 + chrX_22_18525001 chrX_18525001 RAL-307_100b 4522 chrX 18543090 18543138 chrX 18543192 18543231 24 104 10.5 15.5 13.0 1.7 141 chrX 18543090 intron Bx + chrX 18543160 intron Bx + chrX 18543231 intron Bx + chrX_24_18540001 chrX_18540001 RAL-307_100b 4523 chrX 18555356 18555407 chrX 18556902 18556954 transib2 29 1544 10.0 12.5 11.2 2.4 1598 chrX 18555356 intron Bx + chrX 18556155 intron Bx + chrX 18556954 intron Bx + chrX_29_18555001 chrX_18555001 RAL-307_100b 4524 chrX 12946235 12946235 chrX 18572525 18572525 4 5626290 57.0 45.0 51.0 0.1 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-307_100b 4525 chrX 18576079 18576102 chrX 18576182 18576205 14 103 6.0 15.5 10.8 1.2 126 chrX 18576079 intergenic not near genes chrX 18576142 intergenic not near genes chrX 18576205 intergenic not near genes chrX_14_18575001 chrX_18575001 RAL-307_100b 4526 chrX 18644991 18645003 chrX 18645114 18645126 9 122 32.0 13.0 22.5 0.4 135 chrX 18644991 intron Rip11 - chrX 18645058 intron Rip11 - chrX 18645126 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-307_100b 4527 chrX 18645005 18645044 chrX 18645110 18645167 38 118 15.0 11.5 13.2 2.7 162 chrX 18645005 intron Rip11 - chrX 18645086 intron Rip11 - chrX 18645167 intron Rip11 - chrX_38_18645001 chrX_18645001 RAL-307_100b 4528 chrX 18671197 18671249 chrX 18671304 18671356 18 104 5.5 9.5 7.5 2.1 159 chrX 18671197 intergenic not near genes chrX 18671276 intergenic not near genes chrX 18671356 intergenic not near genes chrX_18_18670001 chrX_18670001 RAL-307_100b 4529 chrX 18698822 18698878 chrX 18698964 18699020 29 139 7.0 9.5 8.2 3.2 198 chrX 18698822 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18699020 intergenic not near genes chrX_29_18695001 chrX_18695001 RAL-307_100b 4530 chrX 18746484 18746521 chrX 18746588 18746633 11 106 9.0 0.0 4.5 2.0 149 chrX 18746484 3` UTR CG12609 - chrX 18746558 3` UTR CG12609 - chrX 18746633 3` UTR CG12609 - chrX_11_18745001 chrX_18745001 RAL-307_100b 4531 chrX 18754311 18754342 chrX 18758003 18758028 297 21 3690 16.0 15.5 15.8 1.2 3717 chrX 18754311 intergenic not near genes chrX 18756170 intergenic not near genes chrX 18758028 intergenic not near genes chrX_21_18755001 chrX_18755001 RAL-307_100b 4532 chrX 18819586 18819635 chrX 18819752 18819801 20 171 104.5 98.5 101.5 0.2 215 chrX 18819586 intron CG42450 + chrX 18819694 intron CG42450 + chrX 18819801 5` UTR CG42450 + chrX_20_18815001 chrX_18815001 RAL-307_100b 4533 chrX 18836625 18836681 chrX 18836742 18836766 32 115 13.5 11.0 12.2 2.4 141 chrX 18836625 intron Pvf1 + chrX 18836696 intron Pvf1 + chrX 18836766 intron Pvf1 + chrX_32_18835001 chrX_18835001 RAL-307_100b 4534 chrX 18926515 18926543 chrX 18926632 18926637 9 114 6.5 0.0 3.2 2.1 122 chrX 18926515 intergenic not near genes chrX 18926576 intergenic not near genes chrX 18926637 intergenic not near genes chrX_9_18925001 chrX_18925001 RAL-307_100b 4535 chrX 18957045 18957100 chrX 18965733 18965773 roo 35 8684 5.0 5.5 5.2 5.6 8728 chrX 18957045 intron CG43759 + chrX 18961409 intron CG43759 + chrX 18965773 intron CG43759 + chrX_35_18960001 chrX_18960001 RAL-307_100b 4536 chrX 19020563 19020622 chrX 19020669 19020725 29 102 0.0 9.5 4.8 5.0 162 chrX 19020563 intron CG43759 + chrX 19020644 intron CG43759 + chrX 19020725 intron CG43759 + chrX_29_19020001 chrX_19020001 RAL-307_100b 4537 chrX 19037947 19038002 chrX 19038101 19038156 44 149 9.0 11.5 10.2 3.9 209 chrX 19037947 intergenic not near genes chrX 19038052 intergenic not near genes chrX 19038156 intergenic not near genes chrX_44_19035001 chrX_19035001 RAL-307_100b 4538 chrX 19039034 19039043 chrX 19039164 19039173 4 130 11.0 22.5 16.8 0.2 139 chrX 19039034 intergenic not near genes chrX 19039104 intergenic not near genes chrX 19039173 intergenic not near genes chrX_4_19035001 chrX_19035001 RAL-307_100b 4539 chrX 19039044 19039047 chrX 19039163 19039177 5 128 9.0 22.5 15.8 0.3 133 chrX 19039044 intergenic not near genes chrX 19039110 intergenic not near genes chrX 19039177 intergenic not near genes chrX_5_19035001 chrX_19035001 RAL-307_100b 4540 chrX 19047094 19047136 chrX 19047195 19047237 27 100 3.5 10.5 7.0 3.4 143 chrX 19047094 intergenic not near genes chrX 19047166 intergenic not near genes chrX 19047237 intergenic not near genes chrX_27_19045001 chrX_19045001 RAL-307_100b 4541 chrX 19060384 19060431 chrX 19065193 19065232 Doc 35 4806 17.5 19.5 18.5 1.8 4848 chrX 19060384 intron CG14190 + chrX 19062808 intron CG14190 + chrX 19065232 intron CG14190 + chrX_35_19060001 chrX_19060001 RAL-307_100b 4542 chrX 19073659 19073697 chrX 19073771 19073809 19 110 19.0 13.5 16.2 1.1 150 chrX 19073659 intergenic not near genes chrX 19073734 intergenic not near genes chrX 19073809 intergenic not near genes chrX_19_19070001 chrX_19070001 RAL-307_100b 4543 chrX 19084069 19084122 chrX 19084214 19084267 30 144 6.5 9.5 8.0 3.3 198 chrX 19084069 intergenic CR45503 + chrX 19084168 intergenic CR45503 + chrX 19084267 intergenic CR45503 + chrX_30_19080001 chrX_19080001 RAL-307_100b 4544 chrX 19093936 19093973 chrX 19094037 19094063 7 95 11.0 11.5 11.2 0.6 127 chrX 19093936 intergenic not near genes chrX 19094000 intergenic not near genes chrX 19094063 intergenic not near genes chrX_7_19090001 chrX_19090001 RAL-307_100b 4545 chrX 19098747 19098782 chrX 19098850 19098885 41 103 6.5 11.0 8.8 4.2 138 chrX 19098747 intergenic not near genes chrX 19098816 intergenic not near genes chrX 19098885 intergenic not near genes chrX_41_19095001 chrX_19095001 RAL-307_100b 4546 chrX 19101187 19101207 chrX 19101327 19101337 13 137 10.5 0.5 5.5 2.0 150 chrX 19101187 intergenic not near genes chrX 19101262 intergenic not near genes chrX 19101337 intergenic not near genes chrX_13_19100001 chrX_19100001 RAL-307_100b 4547 chrX 19109110 19109119 chrX 19109309 19109328 7 208 0.0 13.0 6.5 0.9 218 chrX 19109110 intergenic not near genes chrX 19109219 intergenic not near genes chrX 19109328 intergenic not near genes chrX_7_19105001 chrX_19105001 RAL-307_100b 4548 chrX 19109124 19109140 chrX 19109293 19109344 14 198 0.0 8.5 4.2 2.7 220 chrX 19109124 intergenic not near genes chrX 19109234 intergenic not near genes chrX 19109344 intergenic not near genes chrX_14_19105001 chrX_19105001 RAL-307_100b 4549 chrX 19120370 19120383 chrX 19120486 19120499 12 115 35.0 9.5 22.2 0.5 129 chrX 19120370 intergenic not near genes chrX 19120434 intergenic not near genes chrX 19120499 intergenic not near genes chrX_12_19120001 chrX_19120001 RAL-307_100b 4550 chrX 19124415 19124419 chrX 19124528 19124532 6 113 15.5 9.5 12.5 0.4 117 chrX 19124415 intergenic CG15882 - chrX 19124474 intergenic CG15882 - chrX 19124532 intergenic CG15882 -,tgy - chrX_6_19120001 chrX_19120001 RAL-307_100b 4551 chrX 19124421 19124464 chrX 19124527 19124578 17 111 6.0 9.5 7.8 1.9 157 chrX 19124421 intergenic CG15882 - chrX 19124500 intergenic CG15882 - chrX 19124578 intergenic CG15882 -,tgy - chrX_17_19120001 chrX_19120001 RAL-307_100b 4552 chrX 19125666 19125687 chrX 19125820 19125841 15 152 33.0 15.5 24.2 0.6 175 chrX 19125666 intron tgy - chrX 19125754 intron tgy - chrX 19125841 intron tgy - chrX_15_19125001 chrX_19125001 RAL-307_100b 4553 chrX 19125688 19125720 chrX 19125819 19125874 32 150 15.5 15.0 15.2 2.0 186 chrX 19125688 intron tgy - chrX 19125781 intron tgy - chrX 19125874 intron tgy - chrX_32_19125001 chrX_19125001 RAL-307_100b 4554 chrX 19136535 19136536 chrX 19143474 19143481 412 5 6943 26.5 16.5 21.5 0.2 6946 chrX 19136535 intergenic not near genes chrX 19140008 intergenic not near genes chrX 19143481 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 RAL-307_100b 4555 chrX 19136538 19136582 chrX 19143473 19143526 412 28 6938 10.0 15.0 12.5 2.1 6988 chrX 19136538 intergenic not near genes chrX 19140032 intergenic not near genes chrX 19143526 3` UTR RhoGAP18B - chrX_28_19140001 chrX_19140001 RAL-307_100b 4556 chrX 19181990 19182047 chrX 19182128 19182184 16 135 2.0 6.5 4.2 3.1 194 chrX 19181990 3` UTR CG7453 + chrX 19182087 intergenic CG7453 + chrX 19182184 intergenic CG7453 + chrX_16_19180001 chrX_19180001 RAL-307_100b 4557 chrX 19309627 19309635 chrX 19309732 19309740 4 105 47.5 18.0 32.8 0.1 113 chrX 19309627 intergenic not near genes chrX 19309684 intergenic not near genes chrX 19309740 intergenic not near genes chrX_4_19305001 chrX_19305001 RAL-307_100b 4558 chrX 19309637 19309683 chrX 19309730 19309767 39 98 17.5 16.5 17.0 2.2 130 chrX 19309637 intergenic not near genes chrX 19309702 intergenic not near genes chrX 19309767 intergenic not near genes chrX_39_19305001 chrX_19305001 RAL-307_100b 4559 chrX 19324658 19324713 chrX 19325131 19325186 42 472 10.5 16.5 13.5 2.9 528 chrX 19324658 intergenic not near genes chrX 19324922 intergenic not near genes chrX 19325186 intergenic not near genes chrX_42_19320001 chrX_19320001 RAL-307_100b 4560 chrX 19330435 19330478 chrX 19330580 19330602 24 142 9.0 4.0 6.5 3.2 167 chrX 19330435 intron nAChRalpha7 - chrX 19330518 intron nAChRalpha7 - chrX 19330602 intron nAChRalpha7 - chrX_24_19330001 chrX_19330001 RAL-307_100b 4561 chrX 19356973 19357023 chrX 19358429 19358507 NOF 27 1470 7.5 0.5 4.0 5.4 1534 chrX 19356973 intron kek5 + chrX 19357740 intron kek5 + chrX 19358507 intron kek5 + chrX_27_19355001 chrX_19355001 RAL-307_100b 4562 chrX 19380134 19380186 chrX 19380400 19380452 pogo 31 265 16.5 12.5 14.5 2.0 318 chrX 19380134 intron kek5 + chrX 19380293 intron kek5 + chrX 19380452 intron kek5 + chrX_31_19380001 chrX_19380001 RAL-307_100b 4563 chrX 16983076 16983077 chrX 19404963 19404965 13 2421887 42.5 50.0 46.2 0.3 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_13_18190001 chrX_18190001 RAL-307_100b 4564 chrX 19426745 19426774 chrX 19426864 19426893 15 113 22.0 8.5 15.2 0.9 148 chrX 19426745 intron kek5 + chrX 19426819 intron kek5 + chrX 19426893 intron kek5 + chrX_15_19425001 chrX_19425001 RAL-307_100b 4565 chrX 19430518 19430566 chrX 19430641 19430689 33 120 1.5 11.0 6.2 4.6 171 chrX 19430518 intron kek5 + chrX 19430604 intron kek5 + chrX 19430689 intron kek5 + chrX_33_19430001 chrX_19430001 RAL-307_100b 4566 chrX 10904506 10904506 chrX 19462693 19462723 4 8558204 50.0 47.0 48.5 0.1 8558217 chrX 10904506 intergenic not near genes chrX 15183614 intron CG43737 + chrX 19462723 intron kek5 + chrX_4_15180001 chrX_15180001 RAL-307_100b 4567 chrX 19472105 19472130 chrX 19472700 19472719 jockey 17 591 28.0 14.0 21.0 0.8 614 chrX 19472105 intergenic kek5 + chrX 19472412 intergenic kek5 + chrX 19472719 intergenic not near genes chrX_17_19470001 chrX_19470001 RAL-307_100b 4568 chrX 19472139 19472154 chrX 19472689 19472746 jockey 15 571 17.0 11.0 14.0 1.0 607 chrX 19472139 intergenic kek5 + chrX 19472442 intergenic not near genes chrX 19472746 intergenic not near genes chrX_15_19470001 chrX_19470001 RAL-307_100b 4569 chrX 19509102 19509151 chrX 19509426 19509442 40 325 12.0 10.5 11.2 3.3 340 chrX 19509102 intron,3` UTR CG14200 +,Pfrx + chrX 19509272 intron,3` UTR CG14200 +,Pfrx + chrX 19509442 intron CG14200 + chrX_40_19505001 chrX_19505001 RAL-307_100b 4570 chrX 19532847 19532857 chrX 19532947 19532959 6 102 11.5 16.5 14.0 0.4 112 chrX 19532847 3` UTR CG32532 - chrX 19532903 3` UTR CG32532 - chrX 19532959 3` UTR CG32532 - chrX_6_19530001 chrX_19530001 RAL-307_100b 4571 chrX 19532860 19532866 chrX 19532946 19532957 5 93 11.5 16.0 13.8 0.3 97 chrX 19532860 3` UTR CG32532 - chrX 19532908 3` UTR CG32532 - chrX 19532957 3` UTR CG32532 - chrX_5_19530001 chrX_19530001 RAL-307_100b 4572 chrX 19541402 19541448 chrX 19541502 19541521 27 99 6.5 8.5 7.5 3.2 119 chrX 19541402 intron CG32532 - chrX 19541462 intron CG32532 - chrX 19541521 intron CG32532 - chrX_27_19540001 chrX_19540001 RAL-307_100b 4573 chrX 19552645 19552651 chrX 19552777 19552782 4 132 13.0 25.0 19.0 0.2 137 chrX 19552645 intergenic not near genes chrX 19552714 intergenic not near genes chrX 19552782 intergenic not near genes chrX_4_19550001 chrX_19550001 RAL-307_100b 4574 chrX 19553483 19553502 chrX 19553584 19553603 9 99 9.5 22.0 15.8 0.5 120 chrX 19553483 intergenic not near genes chrX 19553543 intergenic not near genes chrX 19553603 intergenic not near genes chrX_9_19550001 chrX_19550001 RAL-307_100b 4575 chrX 19576533 19576590 chrX 19576636 19576686 46 98 9.5 13.5 11.5 3.7 153 chrX 19576533 intron Tao - chrX 19576610 intron Tao - chrX 19576686 intron Tao - chrX_46_19575001 chrX_19575001 RAL-307_100b 4576 chrX 19593926 19593978 chrX 19594031 19594088 56 107 15.0 15.0 15.0 3.5 162 chrX 19593926 exon CG14205 + chrX 19594007 intron CG14205 + chrX 19594088 exon CG14205 + chrX_56_19590001 chrX_19590001 RAL-307_100b 4577 chrX 19595707 19595744 chrX 19595821 19595858 25 112 9.0 18.0 13.5 1.7 151 chrX 19595707 intergenic CG14205 + chrX 19595782 intergenic CG14205 + chrX 19595858 intergenic CG14205 + chrX_25_19595001 chrX_19595001 RAL-307_100b 4578 chrX 19662005 19662056 chrX 19662253 19662304 37 247 12.0 11.5 11.8 2.9 299 chrX 19662005 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662304 intron CG14223 - chrX_37_19660001 chrX_19660001 RAL-307_100b 4579 chrX 19710052 19710104 chrX 19711858 19711872 S-element 45 1803 13.0 16.0 14.5 2.9 1820 chrX 19710052 intron meso18E - chrX 19710962 intron meso18E - chrX 19711872 intron meso18E - chrX_45_19710001 chrX_19710001 RAL-307_100b 4580 chrX 19744605 19744642 chrX 19744755 19744793 12 145 72.0 71.0 71.5 0.2 188 chrX 19744605 5` UTR,exon CG33932 +,Rpp20 + chrX 19744699 intron,intron CG33932 +,Rpp20 + chrX 19744793 5` UTR,exon CG33932 +,Rpp20 + chrX_12_19740001 chrX_19740001 RAL-307_100b 4581 chrX 19744643 19744646 chrX 19744753 19744793 5 136 68.0 69.5 68.8 0.1 150 chrX 19744643 5` UTR,exon CG33932 +,Rpp20 + chrX 19744718 intron,intron CG33932 +,Rpp20 + chrX 19744793 5` UTR,exon CG33932 +,Rpp20 + chrX_5_19740001 chrX_19740001 RAL-307_100b 4582 chrX 19744651 19744656 chrX 19744752 19744780 4 127 67.0 68.0 67.5 0.1 129 chrX 19744651 5` UTR,exon CG33932 +,Rpp20 + chrX 19744716 intron,intron CG33932 +,Rpp20 + chrX 19744780 5` UTR,exon CG33932 +,Rpp20 + chrX_4_19740001 chrX_19740001 RAL-307_100b 4583 chrX 19756100 19756151 chrX 19756211 19756227 13 108 7.5 6.5 7.0 1.6 127 chrX 19756100 intron Pmp70 + chrX 19756164 intron Pmp70 + chrX 19756227 intron Pmp70 + chrX_13_19755001 chrX_19755001 RAL-307_100b 4584 chrX 19797331 19797340 chrX 19804663 19804678 Stalker4 9 7337 40.0 14.5 27.2 0.3 7347 chrX 19797331 intergenic not near genes chrX 19801004 intergenic not near genes chrX 19804678 intergenic not near genes chrX_9_19800001 chrX_19800001 RAL-307_100b 4585 chrX 19819414 19819448 chrX 19819522 19819556 22 107 6.5 9.5 8.0 2.4 142 chrX 19819414 intergenic not near genes chrX 19819485 intergenic not near genes chrX 19819556 intergenic not near genes chrX_22_19815001 chrX_19815001 RAL-307_100b 4586 chrX 19820003 19820040 chrX 19820113 19820133 35 109 13.5 11.5 12.5 2.6 130 chrX 19820003 intergenic not near genes chrX 19820068 intergenic not near genes chrX 19820133 intergenic not near genes chrX_35_19820001 chrX_19820001 RAL-307_100b 4587 chrX 19881430 19881483 chrX 19881536 19881588 33 104 10.5 8.5 9.5 3.1 158 chrX 19881430 intron Hers + chrX 19881509 intron Hers + chrX 19881588 intron Hers + chrX_33_19880001 chrX_19880001 RAL-307_100b 4588 chrX 19884074 19884080 chrX 19884165 19884173 5 94 24.0 15.0 19.5 0.2 99 chrX 19884074 intron Hers + chrX 19884124 intron Hers + chrX 19884173 intron Hers + chrX_5_19880001 chrX_19880001 RAL-307_100b 4589 chrX 19884083 19884122 chrX 19884162 19884184 26 85 12.5 14.5 13.5 1.8 101 chrX 19884083 intron Hers + chrX 19884134 intron Hers + chrX 19884184 intron Hers + chrX_26_19880001 chrX_19880001 RAL-307_100b 4590 chrX 19975804 19975828 chrX 19976061 19976085 21 256 9.0 13.5 11.2 1.7 281 chrX 19975804 intergenic not near genes chrX 19975944 intergenic not near genes chrX 19976085 intergenic not near genes chrX_21_19975001 chrX_19975001 RAL-307_100b 4591 chrX 19983411 19983533 chrX 19983517 19983707 9 150 0.5 0.5 0.5 6.0 296 chrX 19983411 intergenic not near genes chrX 19983559 intergenic not near genes chrX 19983707 intergenic not near genes chrX_9_19980001 chrX_19980001 RAL-307_100b 4592 chrX 19990318 19990364 chrX 19990447 19990494 34 126 13.5 15.0 14.2 2.2 176 chrX 19990318 intergenic not near genes chrX 19990406 intergenic not near genes chrX 19990494 intergenic not near genes chrX_34_19990001 chrX_19990001 RAL-307_100b 4593 chrX 19992390 19992435 chrX 19992491 19992500 33 97 28.5 16.5 22.5 1.4 110 chrX 19992390 intergenic not near genes chrX 19992445 intergenic not near genes chrX 19992500 intergenic not near genes chrX_33_19990001 chrX_19990001 RAL-307_100b 4594 chrX 20041507 20041563 chrX 20041611 20041668 40 103 10.5 10.5 10.5 3.5 161 chrX 20041507 intron Dop2R - chrX 20041588 intron Dop2R - chrX 20041668 intron Dop2R - chrX_40_20040001 chrX_20040001 RAL-307_100b 4595 chrX 20125375 20125395 chrX 20125477 20125502 15 106 6.5 14.5 10.5 1.3 127 chrX 20125375 intergenic CG34331 + chrX 20125438 intergenic CG34331 + chrX 20125502 intergenic CG34331 + chrX_15_20125001 chrX_20125001 RAL-307_100b 4596 chrX 20132281 20132284 chrX 20132389 20132392 5 108 34.0 19.0 26.5 0.2 111 chrX 20132281 intergenic not near genes chrX 20132336 intergenic not near genes chrX 20132392 intergenic not near genes chrX_5_20130001 chrX_20130001 RAL-307_100b 4597 chrX 20132285 20132306 chrX 20132386 20132414 7 106 23.0 16.5 19.8 0.3 129 chrX 20132285 intergenic not near genes chrX 20132350 intergenic not near genes chrX 20132414 intergenic not near genes chrX_7_20130001 chrX_20130001 RAL-307_100b 4598 chrX 20150370 20150372 chrX 20150484 20150485 4 114 10.0 22.5 16.2 0.2 115 chrX 20150370 intron CG9572 + chrX 20150428 intron CG9572 + chrX 20150485 intron CG9572 + chrX_4_20150001 chrX_20150001 RAL-307_100b 4599 chrX 20150373 20150391 chrX 20150477 20150498 13 111 6.0 16.5 11.2 1.1 125 chrX 20150373 intron CG9572 + chrX 20150436 intron CG9572 + chrX 20150498 intron CG9572 + chrX_13_20150001 chrX_20150001 RAL-307_100b 4600 chrX 20150392 20150395 chrX 20150471 20150509 5 105 5.5 10.5 8.0 0.6 117 chrX 20150392 intron CG9572 + chrX 20150450 intron CG9572 + chrX 20150509 intron CG9572 + chrX_5_20150001 chrX_20150001 RAL-307_100b 4601 chrX 20271477 20271516 chrX 20271594 20271633 16 116 15.0 0.5 7.8 1.8 156 chrX 20271477 intergenic not near genes chrX 20271555 intergenic not near genes chrX 20271633 intergenic not near genes chrX_16_20270001 chrX_20270001 RAL-307_100b 4602 chrX 20279729 20279771 chrX 20279835 20279877 16 106 0.5 5.0 2.8 4.2 148 chrX 20279729 intergenic not near genes chrX 20279803 intergenic not near genes chrX 20279877 intergenic not near genes chrX_16_20275001 chrX_20275001 RAL-307_100b 4603 chrX 20312855 20312910 chrX 20312958 20313013 48 102 15.0 8.5 11.8 3.8 158 chrX 20312855 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20313013 intron CG1504 - chrX_48_20310001 chrX_20310001 RAL-307_100b 4604 chrX 20314247 20314266 chrX 20314354 20314367 11 105 14.0 31.5 22.8 0.5 120 chrX 20314247 intron CG1504 - chrX 20314307 intron CG1504 - chrX 20314367 intron CG1504 - chrX_11_20310001 chrX_20310001 RAL-307_100b 4605 chrX 20320283 20320307 chrX 20320377 20320409 13 98 14.0 11.0 12.5 1.0 126 chrX 20320283 intron CG1504 - chrX 20320346 intron CG1504 - chrX 20320409 intron CG1504 - chrX_13_20320001 chrX_20320001 RAL-307_100b 4606 chrX 20362141 20362164 chrX 20362506 20362529 16 362 6.5 16.0 11.2 1.3 388 chrX 20362141 intergenic not near genes chrX 20362335 intergenic not near genes chrX 20362529 intergenic not near genes chrX_16_20360001 chrX_20360001 RAL-307_100b 4607 chrX 20362166 20362168 chrX 20362505 20362533 4 358 6.5 15.5 11.0 0.3 367 chrX 20362166 intergenic not near genes chrX 20362350 intergenic not near genes chrX 20362533 intergenic not near genes chrX_4_20360001 chrX_20360001 RAL-307_100b 4608 chrX 20369295 20369338 chrX 20369404 20369447 31 106 11.0 11.0 11.0 2.6 152 chrX 20369295 intergenic not near genes chrX 20369371 intergenic not near genes chrX 20369447 intergenic not near genes chrX_31_20365001 chrX_20365001 RAL-307_100b 4609 chrX 20374068 20374125 chrX 20374167 20374226 31 98 4.0 11.0 7.5 3.6 158 chrX 20374068 intergenic not near genes chrX 20374147 intergenic not near genes chrX 20374226 intergenic not near genes chrX_31_20370001 chrX_20370001 RAL-307_100b 4610 chrX 20377326 20377331 chrX 20378818 20378823 hobo 5 1492 26.5 41.5 34.0 0.1 1497 chrX 20377326 intergenic not near genes chrX 20378074 intergenic not near genes chrX 20378823 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-307_100b 4611 chrX 20377332 20377339 chrX 20378813 20378829 hobo 11 1488 25.0 36.5 30.8 0.3 1497 chrX 20377332 intergenic not near genes chrX 20378080 intergenic not near genes chrX 20378829 intergenic not near genes chrX_11_20375001 chrX_20375001 RAL-307_100b 4612 chrX 20377340 20377343 chrX 20378812 20378815 hobo 4 1482 22.5 35.0 28.8 0.1 1475 chrX 20377340 intergenic not near genes chrX 20378078 intergenic not near genes chrX 20378815 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-307_100b 4613 chrX 20437335 20437393 chrX 20437935 20437983 64 597 13.0 9.5 11.2 5.2 648 chrX 20437335 intron CG1695 + chrX 20437659 intron CG1695 + chrX 20437983 intron CG1695 + chrX_64_20435001 chrX_20435001 RAL-307_100b 4614 chrX 20443161 20443167 chrX 20443257 20443268 5 99 22.0 11.5 16.8 0.3 107 chrX 20443161 exon CG1695 + chrX 20443214 intron CG1695 + chrX 20443268 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-307_100b 4615 chrX 20443181 20443205 chrX 20443246 20443306 16 97 11.5 9.5 10.5 1.4 125 chrX 20443181 intron CG1695 + chrX 20443244 intron CG1695 + chrX 20443306 intron CG1695 + chrX_16_20440001 chrX_20440001 RAL-307_100b 4616 chrX 20467990 20467995 chrX 20468104 20468109 5 114 30.5 0.0 15.2 0.3 119 chrX 20467990 intron GstT3 + chrX 20468050 intron GstT3 + chrX 20468109 intron GstT3 + chrX_5_20465001 chrX_20465001 RAL-307_100b 4617 chrX 20467999 20468039 chrX 20468103 20468135 16 110 12.5 0.0 6.2 2.2 136 chrX 20467999 intron GstT3 + chrX 20468067 intron GstT3 + chrX 20468135 intron GstT3 + chrX_16_20465001 chrX_20465001 RAL-307_100b 4618 chrX 20528579 20528584 chrX 20528952 20528957 9 373 27.5 12.0 19.8 0.4 378 chrX 20528579 intergenic not near genes chrX 20528768 intergenic not near genes chrX 20528957 intergenic not near genes chrX_9_20525001 chrX_20525001 RAL-307_100b 4619 chrX 20528587 20528631 chrX 20528949 20528982 33 371 9.0 11.0 10.0 3.0 395 chrX 20528587 intergenic not near genes chrX 20528784 intergenic not near genes chrX 20528982 intergenic not near genes chrX_33_20525001 chrX_20525001 RAL-307_100b 4620 chrX 20531736 20531793 chrX 20531860 20531917 56 123 3.5 9.5 6.5 7.5 181 chrX 20531736 intergenic not near genes chrX 20531826 intergenic not near genes chrX 20531917 intergenic not near genes chrX_56_20530001 chrX_20530001 RAL-307_100b 4621 chrX 20535022 20535037 chrX 20535111 20535133 6 97 7.0 0.0 3.5 1.3 111 chrX 20535022 intergenic not near genes chrX 20535078 intergenic not near genes chrX 20535133 intergenic not near genes chrX_6_20535001 chrX_20535001 RAL-307_100b 4622 chrX 20541325 20541335 chrX 20541471 20541483 14 148 3.0 1.0 2.0 4.7 158 chrX 20541325 intron RunxB + chrX 20541404 intron RunxB + chrX 20541483 intron RunxB + chrX_14_20540001 chrX_20540001 RAL-307_100b 4623 chrX 20546524 20546566 chrX 20546715 20546755 28 190 2.0 7.0 4.5 5.1 231 chrX 20546524 intron RunxB + chrX 20546640 intron RunxB + chrX 20546755 intron RunxB + chrX_28_20545001 chrX_20545001 RAL-307_100b 4624 chrX 20635408 20635447 chrX 20635599 20635638 33 188 11.0 16.5 13.8 2.2 230 chrX 20635408 intergenic not near genes chrX 20635523 intergenic not near genes chrX 20635638 intergenic not near genes chrX_33_20635001 chrX_20635001 RAL-307_100b 4625 chrX 20680017 20680047 chrX 20680119 20680147 28 100 4.5 18.5 11.5 2.2 130 chrX 20680017 intergenic not near genes chrX 20680082 intergenic not near genes chrX 20680147 intergenic not near genes chrX_28_20680001 chrX_20680001 RAL-307_100b 4626 chrX 20710410 20710441 chrX 20710492 20710543 27 100 7.0 5.0 6.0 3.9 133 chrX 20710410 intergenic not near genes chrX 20710476 intergenic not near genes chrX 20710543 intergenic not near genes chrX_27_20710001 chrX_20710001 RAL-307_100b 4627 chrX 20780202 20780238 chrX 20780452 20780488 32 249 14.5 17.5 16.0 1.9 286 chrX 20780202 intron,3` UTR shakB -,CG32507 - chrX 20780345 intron,3` UTR shakB -,CG32507 - chrX 20780488 intron,3` UTR shakB -,CG32507 - chrX_32_20780001 chrX_20780001 RAL-307_100b 4628 chrX 20810696 20810727 chrX 20810799 20810810 11 101 19.5 9.5 14.5 0.7 114 chrX 20810696 intron shakB - chrX 20810753 intron shakB - chrX 20810810 intron shakB - chrX_11_20810001 chrX_20810001 RAL-307_100b 4629 chrX 20836739 20836758 chrX 20844349 20844385 roo 23 7624 1.5 18.5 10.0 2.1 7646 chrX 20836739 intron shakB - chrX 20840562 intron shakB - chrX 20844385 intron shakB - chrX_23_20840001 chrX_20840001 RAL-307_100b 4630 chrX 20890495 20890543 chrX 20890605 20890648 26 109 10.0 13.5 11.8 2.0 153 chrX 20890495 intron shakB - chrX 20890572 intron shakB - chrX 20890648 intron shakB - chrX_26_20890001 chrX_20890001 RAL-307_100b 4631 chrX 20897916 20897919 chrX 20898031 20898034 4 115 30.0 0.0 15.0 0.2 118 chrX 20897916 intron shakB - chrX 20897975 intron shakB - chrX 20898034 intron shakB - chrX_4_20895001 chrX_20895001 RAL-307_100b 4632 chrX 20897921 20897950 chrX 20898030 20898054 17 110 15.5 0.0 7.8 1.9 133 chrX 20897921 intron shakB - chrX 20897988 intron shakB - chrX 20898054 intron shakB - chrX_17_20895001 chrX_20895001 RAL-307_100b 4633 chrX 20915023 20915074 chrX 20915219 20915270 28 194 17.0 10.5 13.8 1.9 247 chrX 20915023 intron shakB - chrX 20915146 intron shakB - chrX 20915270 intron shakB - chrX_28_20915001 chrX_20915001 RAL-307_100b 4634 chrX 20940705 20940738 chrX 20942189 20942226 hobo 32 1491 24.0 8.0 16.0 1.9 1521 chrX 20940705 intergenic not near genes chrX 20941466 intergenic not near genes chrX 20942226 intergenic not near genes chrX_32_20940001 chrX_20940001 RAL-307_100b 4635 chrX 20940741 20940753 chrX 20942188 20942207 hobo 6 1461 16.5 7.5 12.0 0.5 1466 chrX 20940741 intergenic not near genes chrX 20941474 intergenic not near genes chrX 20942207 intergenic not near genes chrX_6_20940001 chrX_20940001 RAL-307_100b 4636 chrX 20948239 20948282 chrX 20948343 20948396 24 111 0.0 11.0 5.5 3.7 157 chrX 20948239 intergenic not near genes chrX 20948318 intergenic not near genes chrX 20948396 intergenic not near genes chrX_24_20945001 chrX_20945001 RAL-307_100b 4637 chrX 20955831 20955889 chrX 20956007 20956065 49 174 8.5 12.0 10.2 4.4 234 chrX 20955831 intergenic not near genes chrX 20955948 intergenic not near genes chrX 20956065 intergenic not near genes chrX_49_20955001 chrX_20955001 RAL-307_100b 4638 chrX 20956980 20957013 chrX 20962427 20962455 I-element 13 5458 3.5 9.5 6.5 1.7 5475 chrX 20956980 intergenic not near genes chrX 20959718 intergenic not near genes chrX 20962455 intergenic Ser6 - chrX_13_20955001 chrX_20955001 RAL-307_100b 4639 chrX 20976189 20976242 chrX 20977494 20977547 37 1301 10.5 11.0 10.8 3.1 1358 chrX 20976189 intergenic not near genes chrX 20976868 intergenic not near genes chrX 20977547 intergenic not near genes chrX_37_20975001 chrX_20975001 RAL-307_100b 4640 chrX 21029162 21029179 chrX 21029375 21029380 19 230 6.5 18.5 12.5 1.4 218 chrX 21029162 3` UTR CG1529 - chrX 21029271 3` UTR CG1529 - chrX 21029380 3` UTR CG1529 - chrX_19_21025001 chrX_21025001 RAL-307_100b 4641 chrX 21029791 21029812 chrX 21029942 21029978 12 163 10.0 18.5 14.2 0.8 187 chrX 21029791 3` UTR CG1529 - chrX 21029884 3` UTR CG1529 - chrX 21029978 3` UTR CG1529 - chrX_12_21025001 chrX_21025001 RAL-307_100b 4642 chrX 21061841 21061891 chrX 21062351 21062401 roo 28 508 11.0 8.0 9.5 2.7 560 chrX 21061841 intron bves + chrX 21062121 intron bves + chrX 21062401 intron,3` UTR bves +,CG32512 - chrX_28_21060001 chrX_21060001 RAL-307_100b 4643 chrX 21084531 21084582 chrX 21085071 21085122 30 536 11.0 15.0 13.0 2.1 591 chrX 21084531 intergenic not near genes chrX 21084826 intergenic not near genes chrX 21085122 intergenic not near genes chrX_30_21080001 chrX_21080001 RAL-307_100b 4644 chrX 21086109 21086161 chrX 21087157 21087205 jockey 39 1052 13.0 13.0 13.0 2.8 1096 chrX 21086109 intergenic not near genes chrX 21086657 intergenic not near genes chrX 21087205 intergenic not near genes chrX_39_21085001 chrX_21085001 RAL-307_100b 4645 chrX 21260397 21260409 chrX 21260579 21260585 8 180 19.5 12.0 15.8 0.5 188 chrX 21260397 intron CG32521 - chrX 21260491 intron CG32521 - chrX 21260585 intron CG32521 - chrX_8_21260001 chrX_21260001 RAL-307_100b 4646 chrX 21260411 21260452 chrX 21260577 21260620 30 176 8.0 11.5 9.8 2.8 209 chrX 21260411 intron CG32521 - chrX 21260516 intron CG32521 - chrX 21260620 intron CG32521 - chrX_30_21260001 chrX_21260001 RAL-307_100b 4647 chrX 21264704 21264764 chrX 21264805 21264826 55 97 14.5 16.0 15.2 3.4 122 chrX 21264704 intron CG32521 - chrX 21264765 intron CG32521 - chrX 21264826 intron CG32521 - chrX_55_21260001 chrX_21260001 RAL-307_100b 4648 chrX 21308848 21308875 chrX 21308979 21309026 7 136 15.5 0.0 7.8 0.8 178 chrX 21308848 exon CG1801 - chrX 21308937 intron CG1801 - chrX 21309026 intron CG1801 - chrX_7_21305001 chrX_21305001 RAL-307_100b 4649 chrX 21328091 21328145 chrX 21328227 21328280 26 136 9.5 8.0 8.8 2.7 189 chrX 21328091 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328280 intergenic CG1486 +,tty - chrX_26_21325001 chrX_21325001 RAL-307_100b 4650 chrX 21412840 21412861 chrX 21412957 21412983 12 122 0.0 0.5 0.2 10.0 143 chrX 21412840 intergenic not near genes chrX 21412912 intergenic not near genes chrX 21412983 intergenic not near genes chrX_12_21410001 chrX_21410001 RAL-307_100b 4651 chrX 21452746 21452773 chrX 21452845 21452869 15 102 0.0 13.0 6.5 2.0 123 chrX 21452746 intron CG42343 - chrX 21452808 intron CG42343 - chrX 21452869 intron CG42343 - chrX_15_21450001 chrX_21450001 RAL-307_100b 4652 chrX 21454846 21454872 chrX 21454955 21454981 8 109 8.5 13.0 10.8 0.7 135 chrX 21454846 intron CG42343 - chrX 21454914 intron CG42343 - chrX 21454981 intron CG42343 - chrX_8_21450001 chrX_21450001 RAL-307_100b 4653 chrX 21455188 21455245 chrX 21455392 21455447 22 204 5.5 0.0 2.8 5.8 259 chrX 21455188 intron CG42343 - chrX 21455318 intron CG42343 - chrX 21455447 intron CG42343 - chrX_22_21455001 chrX_21455001 RAL-307_100b 4654 chrX 21458691 21458694 chrX 21464152 21464155 Ivk 6 5461 21.0 12.5 16.8 0.3 5464 chrX 21458691 intergenic not near genes chrX 21461423 intergenic not near genes chrX 21464155 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-307_100b 4655 chrX 21458695 21458727 chrX 21464149 21464184 Ivk 36 5458 5.5 12.5 9.0 3.6 5489 chrX 21458695 intergenic not near genes chrX 21461440 intergenic not near genes chrX 21464184 intergenic not near genes chrX_36_21460001 chrX_21460001 RAL-307_100b 4656 chrX 21474383 21474397 chrX 21474774 21474788 1731 11 391 29.0 15.0 22.0 0.5 405 chrX 21474383 intergenic not near genes chrX 21474586 intergenic not near genes chrX 21474788 intergenic not near genes chrX_11_21470001 chrX_21470001 RAL-307_100b 4657 chrX 21474398 21474432 chrX 21474772 21474823 1731 21 388 13.5 14.0 13.8 1.4 425 chrX 21474398 intergenic not near genes chrX 21474610 intergenic not near genes chrX 21474823 intergenic not near genes chrX_21_21470001 chrX_21470001 RAL-307_100b 4658 chrX 21475606 21475682 chrX 21475735 21475785 9 106 0.0 14.5 7.2 1.1 179 chrX 21475606 intergenic not near genes chrX 21475696 intergenic not near genes chrX 21475785 intergenic not near genes chrX_9_21475001 chrX_21475001 RAL-307_100b 4659 chrX 21565396 21565439 chrX 21565491 21565537 27 99 9.0 14.0 11.5 2.2 141 chrX 21565396 intergenic not near genes chrX 21565466 intergenic not near genes chrX 21565537 intergenic not near genes chrX_27_21565001 chrX_21565001 RAL-307_100b 4660 chrX 21567934 21567955 chrX 21568040 21568045 11 103 32.5 3.0 17.8 0.6 111 chrX 21567934 intergenic not near genes chrX 21567990 intergenic not near genes chrX 21568045 intergenic not near genes chrX_11_21565001 chrX_21565001 RAL-307_100b 4661 chrX 21573866 21573913 chrX 21573978 21574025 40 109 7.5 7.0 7.2 4.9 159 chrX 21573866 intergenic not near genes chrX 21573946 intergenic not near genes chrX 21574025 intergenic not near genes chrX_40_21570001 chrX_21570001 RAL-307_100b 4662 chrX 21575517 21575558 chrX 21575621 21575662 26 103 15.0 12.0 13.5 1.8 145 chrX 21575517 intergenic not near genes chrX 21575590 intergenic not near genes chrX 21575662 intergenic not near genes chrX_26_21575001 chrX_21575001 RAL-307_100b 4663 chrX 21581114 21581155 chrX 21581219 21581259 17 104 2.0 14.5 8.2 1.8 145 chrX 21581114 intergenic not near genes chrX 21581186 intergenic not near genes chrX 21581259 intergenic not near genes chrX_17_21580001 chrX_21580001 RAL-307_100b 4664 chrX 21595566 21595574 chrX 21598645 21598653 micropia 5 3079 28.0 30.0 29.0 0.2 3087 chrX 21595566 intergenic not near genes chrX 21597110 intergenic not near genes chrX 21598653 intergenic not near genes chrX_5_21595001 chrX_21595001 RAL-307_100b 4665 chrX 21668235 21668290 chrX 21668345 21668400 49 107 11.0 3.5 7.2 6.0 165 chrX 21668235 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668400 intergenic not near genes chrX_49_21665001 chrX_21665001 RAL-307_100b 4666 chrX 22406532 22406551 chrX 22406631 22406645 6 105 4.5 0.5 2.5 1.7 113 chrX 22406532 intergenic not near genes chrX 22406588 intergenic not near genes chrX 22406645 intergenic not near genes chrX_6_22405001 chrX_22405001 RAL-307_100b 4667 chrX 22406559 22406570 chrX 22406628 22406684 8 92 2.0 0.5 1.2 3.6 125 chrX 22406559 intergenic not near genes chrX 22406622 intergenic not near genes chrX 22406684 intergenic not near genes chrX_8_22405001 chrX_22405001 RAL-307_100b 4668 chrX 22478848 22478898 chrX 22479006 22479056 42 155 6.5 10.0 8.2 4.6 208 chrX 22478848 intron CG12576 - chrX 22478952 intron CG12576 - chrX 22479056 intron CG12576 - chrX_42_22475001 chrX_22475001 RAL-307_100b 4669 chrX 22491305 22491315 chrX 22491410 22491412 5 103 7.0 25.0 16.0 0.3 107 chrX 22491305 intron l(1)G0196 + chrX 22491358 intron l(1)G0196 + chrX 22491412 intron l(1)G0196 + chrX_5_22490001 chrX_22490001 RAL-307_100b 4670 chrX 22519283 22519325 chrX 22519443 22519485 31 159 9.0 11.0 10.0 2.8 202 chrX 22519283 intron CG17600 + chrX 22519384 intron CG17600 + chrX 22519485 intron CG17600 + chrX_31_22515001 chrX_22515001 RAL-307_100b 4671 chrX 22522612 22522644 chrX 22525457 22525472 NOF 5 2841 18.5 7.5 13.0 0.4 2860 chrX 22522612 intron CG17600 + chrX 22524042 intron CG17600 + chrX 22525472 intron CG17600 + chrX_5_22520001 chrX_22520001 RAL-307_100b 4672 chrX 22564561 22564583 chrX 22575115 22575146 jockey 19 10551 46.0 31.5 38.8 0.5 10585 chrX 22564561 intergenic not near genes chrX 22569854 intergenic not near genes chrX 22575146 intergenic not near genes chrX_19_22565001 chrX_22565001 RAL-307_100b 4673 chrX 22585513 22585538 chrX 22585596 22585647 11 101 12.0 16.0 14.0 0.7 134 chrX 22585513 intron Cda4 - chrX 22585580 intron Cda4 - chrX 22585647 intron Cda4 - chrX_11_22585001 chrX_22585001 RAL-307_100b 4674 chrX 22586016 22586024 chrX 22644840 22644848 5 58824 41.0 27.5 34.2 0.1 58832 chrX 22586016 intron Cda4 - chrX 22615432 intron Cda4 - chrX 22644848 intergenic not near genes chrX_5_22615001 chrX_22615001 RAL-307_100b 4675 chrX 22586012 22586025 chrX 22644851 22644864 9 58834 41.0 23.0 32.0 0.3 58852 chrX 22586012 intron Cda4 - chrX 22615438 intron Cda4 - chrX 22644864 intergenic not near genes chrX_9_22615001 chrX_22615001 RAL-307_100b 4676 chrX 22658125 22658180 chrX 22658320 22658375 34 194 7.5 10.5 9.0 3.4 250 chrX 22658125 intron CR44997 + chrX 22658250 intron CR44997 + chrX 22658375 intron CR44997 + chrX_34_22655001 chrX_22655001 RAL-307_100b 4677 chrX 22658486 22658545 chrX 22658615 22658668 41 127 5.5 9.0 7.2 5.0 182 chrX 22658486 intron CR44997 + chrX 22658577 intron CR44997 + chrX 22658668 intron CR44997 + chrX_41_22655001 chrX_22655001 RAL-307_100b 4678 chrX 22661960 22661976 chrX 22662065 22662082 11 106 1.0 23.0 12.0 0.8 122 chrX 22661960 intron CR44997 + chrX 22662021 intron CR44997 + chrX 22662082 intron CR44997 + chrX_11_22660001 chrX_22660001 RAL-307_100b 4679 chrX 22697476 22697505 chrX 22701798 22701827 Juan 24 4321 27.0 25.5 26.2 0.9 4351 chrX 22697476 intron CR44997 + chrX 22699652 intron CR44997 + chrX 22701827 intron CR44997 + chrX_24_22695001 chrX_22695001 RAL-307_100b 4680 chrX 22697506 22697516 chrX 22701789 22701838 Juan 13 4317 21.0 19.0 20.0 0.6 4332 chrX 22697506 intron CR44997 + chrX 22699672 intron CR44997 + chrX 22701838 intron CR44997 + chrX_13_22695001 chrX_22695001 RAL-307_100b 4681 chrX 22734435 22734450 chrX 22734539 22734554 10 103 8.0 7.0 7.5 1.2 119 chrX 22734435 intron CR44997 + chrX 22734494 intron CR44997 + chrX 22734554 intron CR44997 + chrX_10_22730001 chrX_22730001 RAL-307_100b 4682 chrX 22771488 22771530 chrX 22774796 22774829 297 22 3306 13.5 10.0 11.8 1.7 3341 chrX 22771488 intron CR44997 + chrX 22773158 intron CR44997 + chrX 22774829 intron CR44997 + chrX_22_22770001 chrX_22770001 RAL-307_100b 4683 chrX 22784052 22784106 chrX 22784160 22784214 32 106 10.5 9.5 10.0 2.9 162 chrX 22784052 intron CR44997 + chrX 22784133 intron CR44997 + chrX 22784214 intron CR44997 + chrX_32_22780001 chrX_22780001 RAL-307_100b 4684 chrX 22811974 22811979 chrX 22816771 22816776 F-element 4 4797 31.5 18.0 24.8 0.2 4802 chrX 22811974 intergenic CG12446 - chrX 22814375 intergenic not near genes chrX 22816776 intergenic not near genes chrX_4_22810001 chrX_22810001 RAL-307_100b 4685 chrX 22811981 22812005 chrX 22816768 22816802 F-element 22 4795 22.5 17.0 19.8 1.1 4821 chrX 22811981 intergenic CG12446 - chrX 22814392 intergenic not near genes chrX 22816802 intergenic not near genes chrX_22_22810001 chrX_22810001 RAL-307_100b 4686 chrX 22824220 22824231 chrX 22824365 22824382 4 150 1.5 13.5 7.5 0.5 162 chrX 22824220 intergenic fog - chrX 22824301 intergenic fog - chrX 22824382 3` UTR fog - chrX_4_22820001 chrX_22820001 RAL-307_100b 4687 chrX 22824233 22824447 chrX 22824362 22824578 38 153 12.0 13.5 12.8 2.8 345 chrX 22824233 intergenic fog - chrX 22824406 3` UTR fog - chrX 22824578 3` UTR fog - chrX_38_22820001 chrX_22820001 RAL-307_100b 4688 chrX 22867953 22868011 chrX 22868092 22868158 37 137 10.0 6.5 8.2 4.0 205 chrX 22867953 exon CG42346 + chrX 22868056 intron CG42346 + chrX 22868158 intron CG42346 + chrX_37_22865001 chrX_22865001 RAL-307_100b 4689 chrX 22870851 22870898 chrX 22870961 22871014 17 110 14.0 14.5 14.2 1.1 163 chrX 22870851 intron,3` UTR CG42346 +,CR43656 - chrX 22870932 intron,3` UTR CG42346 +,CR43656 - chrX 22871014 intron,3` UTR CG42346 +,CR43656 - chrX_17_22870001 chrX_22870001 RAL-307_100b 4690 chrX 22893463 22893506 chrX 22893576 22893612 13 101 14.0 12.0 13.0 0.9 149 chrX 22893463 intergenic not near genes chrX 22893538 intergenic not near genes chrX 22893612 intergenic not near genes chrX_13_22890001 chrX_22890001 RAL-307_100b 4691 chrX 22893507 22893525 chrX 22893573 22893596 14 93 7.5 10.5 9.0 1.4 89 chrX 22893507 intergenic not near genes chrX 22893552 intergenic not near genes chrX 22893596 intergenic not near genes chrX_14_22890001 chrX_22890001 RAL-307_100b 4692 chrX 22967365 22967389 chrX 23154541 23154559 diver 6 187175 22.0 38.5 30.2 0.2 187194 chrX 22967365 intergenic not near genes chrX 23060962 intergenic not near genes chrX 23154559 intergenic not near genes chrX_6_23060001 chrX_23060001 RAL-307_100b 4693 chrX 22987080 22987132 chrX 22989764 22989816 Burdock 35 2682 8.0 4.0 6.0 5.0 2736 chrX 22987080 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989816 intron,intron stnA -,stnB - chrX_35_22985001 chrX_22985001 RAL-307_100b 4694 chrX 22992370 22992429 chrX 22992526 22992581 36 154 11.5 5.5 8.5 3.8 211 chrX 22992370 intron,intron stnA -,stnB - chrX 22992476 intron,intron stnA -,stnB - chrX 22992581 3` UTR,exon stnA -,stnB - chrX_36_22990001 chrX_22990001 RAL-307_100b 4695 chrX 22996289 22996341 chrX 23003546 23003567 roo 34 7255 7.0 14.0 10.5 3.0 7278 chrX 22996289 intron,intron stnA -,stnB - chrX 22999928 intron,intron stnA -,stnB - chrX 23003567 intron,intron stnA -,stnB - chrX_34_22995001 chrX_22995001 RAL-307_100b 4696 chrX 23036359 23036413 chrX 23037785 23037839 pogo 40 1425 11.0 10.5 10.8 3.4 1480 chrX 23036359 intron CG12061 + chrX 23037099 intron CG12061 + chrX 23037839 intron CG12061 + chrX_40_23035001 chrX_23035001 RAL-307_100b 4697 chrX 23045221 23045251 chrX 23045330 23045358 18 106 17.5 12.5 15.0 1.1 137 chrX 23045221 intron CG12061 + chrX 23045290 intron CG12061 + chrX 23045358 intron CG12061 + chrX_18_23045001 chrX_23045001 RAL-307_100b 4698 chrX 23053476 23053477 chrX 23062409 23062421 diver 4 8941 9.0 15.0 12.0 0.3 8945 chrX 23053476 intergenic not near genes chrX 23057948 intergenic not near genes chrX 23062421 intergenic not near genes chrX_4_23055001 chrX_23055001 RAL-307_100b 4699 chrX 22967488 22967503 chrX 23154542 23154553 diver 6 187052 7.5 38.5 23.0 0.2 187065 chrX 22967488 intergenic not near genes chrX 23061020 intergenic not near genes chrX 23154553 intergenic not near genes chrX_6_23060001 chrX_23060001 RAL-307_100b 4700 chrX 22967482 22967506 chrX 23154554 23154556 diver 6 187056 7.5 38.5 23.0 0.2 187074 chrX 22967482 intergenic not near genes chrX 23061019 intergenic not near genes chrX 23154556 intergenic not near genes chrX_6_23060001 chrX_23060001 RAL-307_100b 4701 chrY 864697 864728 chrY 864793 864829 8 101 70.5 67.0 68.8 0.1 132 chrY 864697 intergenic not near genes chrY 864763 intergenic not near genes chrY 864829 intergenic not near genes chrY_8_860001 chrY_860001 RAL-307_100b 4702 chrY 975608 975824 chrY 975750 975926 41 138 503.0 489.0 496.0 0.1 318 chrY 975608 intergenic not near genes chrY 975767 intergenic not near genes chrY 975926 intergenic not near genes chrY_41_975001 chrY_975001 RAL-307_100b 4703 chrY 1419885 1419928 chrY 1420164 1420178 13 276 28.5 26.5 27.5 0.5 293 chrY 1419885 intergenic not near genes chrY 1420032 intergenic not near genes chrY 1420178 intergenic not near genes chrY_13_1420001 chrY_1420001 RAL-307_100b 4704 chrY 1420499 1420648 chrY 1420754 1420792 9 172 19.5 29.5 24.5 0.4 293 chrY 1420499 intergenic not near genes chrY 1420646 intergenic not near genes chrY 1420792 intergenic not near genes chrY_9_1420001 chrY_1420001 RAL-307_100b 4705 chrY 1431372 1431373 chrY 1447397 1447434 Doc 4 16048 17.0 26.5 21.8 0.2 16062 chrY 1431372 intergenic not near genes chrY 1439403 intergenic not near genes chrY 1447434 intergenic not near genes chrY_4_1435001 chrY_1435001 RAL-307_100b 4706 chrY 3664582 3664618 chrY 3664709 3664745 6 126 2.0 0.0 1.0 3.0 163 chrY 3664582 intergenic CG40948 + chrY 3664664 intergenic CG40948 + chrY 3664745 intergenic CG40948 + chrY_6_3660001 chrY_3660001 RAL-307_100b 4707 chrY 3664969 3665006 chrY 3665098 3665135 10 129 2.0 2.0 2.0 3.3 166 chrY 3664969 intergenic CG40948 + chrY 3665052 intergenic CG40948 + chrY 3665135 intergenic not near genes chrY_10_3665001 chrY_3665001 RAL-307_100b 4708 chrY 3666407 3666439 chrY 3666585 3666612 6 176 5.0 2.5 3.8 1.2 205 chrY 3666407 intergenic not near genes chrY 3666510 intergenic not near genes chrY 3666612 intergenic not near genes chrY_6_3665001 chrY_3665001 RAL-307_100b