SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 12959 12970 chr2L 13303 13314 7 344 7.5 9.0 8.2 0.8 355 chr2L 12959 intron l(2)gl - chr2L 13136 intron l(2)gl - chr2L 13314 intron l(2)gl - chr2L_7_10001 chr2L_10001 RAL-306_75b 2 chr2L 47474 47488 chr2L 52578 52593 jockey 4 5105 3.0 3.5 3.2 1.0 5119 chr2L 47474 intron Cda5 - chr2L 50034 intron Cda5 - chr2L 52593 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-306_75b 3 chr2L 172044 172048 chr2L 172154 172158 4 110 0.5 1.0 0.8 2.2 114 chr2L 172044 intron spen + chr2L 172101 intron spen + chr2L 172158 intron spen + chr2L_4_170001 chr2L_170001 RAL-306_75b 4 chr2L 325135 325149 chr2L 325212 325224 4 76 2.0 1.0 1.5 1.6 89 chr2L 325135 intron Plc21C + chr2L 325180 intron Plc21C + chr2L 325224 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-306_75b 5 chr2L 347885 347910 chr2L 355385 355410 blood 4 7500 1.5 2.5 2.0 1.3 7525 chr2L 347885 3` UTR Plc21C + chr2L 351648 intron Plc21C + chr2L 355410 3` UTR Plc21C + chr2L_4_350001 chr2L_350001 RAL-306_75b 6 chr2L 467465 467494 chr2L 467554 467581 6 88 2.5 1.0 1.8 2.1 116 chr2L 467465 intron CG4297 - chr2L 467523 intron CG4297 - chr2L 467581 intron CG4297 - chr2L_6_465001 chr2L_465001 RAL-306_75b 7 chr2L 927864 927880 chr2L 928014 928031 8 151 2.5 1.5 2.0 2.7 167 chr2L 927864 intron CG4341 + chr2L 927948 intron CG4341 + chr2L 928031 intron CG4341 + chr2L_8_925001 chr2L_925001 RAL-306_75b 8 chr2L 976881 976907 chr2L 984517 984543 roo 6 7636 2.0 1.0 1.5 2.4 7662 chr2L 976881 intergenic not near genes chr2L 980712 intergenic not near genes chr2L 984543 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-306_75b 9 chr2L 996736 996748 chr2L 1005830 1005841 roo 4 9094 0.5 4.0 2.2 1.2 9105 chr2L 996736 intergenic not near genes chr2L 1001288 intergenic not near genes chr2L 1005841 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-306_75b 10 chr2L 1041357 1041383 chr2L 1041445 1041469 5 87 1.0 0.5 0.8 2.8 112 chr2L 1041357 intron IA-2 - chr2L 1041413 intron IA-2 - chr2L 1041469 intron IA-2 - chr2L_5_1040001 chr2L_1040001 RAL-306_75b 11 chr2L 1156859 1156866 chr2L 1156964 1156971 4 105 3.5 1.5 2.5 1.1 112 chr2L 1156859 intron capt - chr2L 1156915 intron capt - chr2L 1156971 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-306_75b 12 chr2L 1220128 1220150 chr2L 1227594 1227616 blood 5 7466 4.5 1.0 2.8 1.3 7488 chr2L 1220128 intron CG42329 + chr2L 1223872 intron CG42329 + chr2L 1227616 intron CG42329 + chr2L_5_1220001 chr2L_1220001 RAL-306_75b 13 chr2L 1261149 1261260 chr2L 1261226 1261340 6 80 0.0 0.0 0.0 6.0 191 chr2L 1261149 intron robo3 + chr2L 1261244 intron robo3 + chr2L 1261340 intron robo3 + chr2L_6_1260001 chr2L_1260001 RAL-306_75b 14 chr2L 1570699 1570719 chr2L 1573571 1573591 F-element 8 2872 1.0 1.0 1.0 4.0 2892 chr2L 1570699 intron haf + chr2L 1572145 intron haf + chr2L 1573591 intron haf + chr2L_8_1570001 chr2L_1570001 RAL-306_75b 15 chr2L 1678982 1679009 chr2L 1686447 1686472 blood 12 7464 0.0 3.5 1.8 4.3 7490 chr2L 1678982 intron chinmo + chr2L 1682727 intron chinmo + chr2L 1686472 intron chinmo + chr2L_12_1680001 chr2L_1680001 RAL-306_75b 16 chr2L 1721823 1721841 chr2L 1721907 1721925 4 84 0.0 0.5 0.2 3.3 102 chr2L 1721823 intron Rim2 - chr2L 1721874 intron Rim2 - chr2L 1721925 intron Rim2 - chr2L_4_1720001 chr2L_1720001 RAL-306_75b 17 chr2L 1724815 1724825 chr2L 1724896 1724907 5 82 0.5 1.5 1.0 2.5 92 chr2L 1724815 3` UTR Eno - chr2L 1724861 3` UTR Eno - chr2L 1724907 3` UTR Eno - chr2L_5_1720001 chr2L_1720001 RAL-306_75b 18 chr2L 2085708 2085727 chr2L 2086047 2086066 5 339 0.0 1.0 0.5 3.3 358 chr2L 2085708 intron dpr3 - chr2L 2085887 intron dpr3 - chr2L 2086066 intron dpr3 - chr2L_5_2085001 chr2L_2085001 RAL-306_75b 19 chr2L 2112119 2112144 chr2L 2119781 2119806 opus 4 7662 0.0 0.0 0.0 4.0 7687 chr2L 2112119 intergenic not near genes chr2L 2115962 intergenic not near genes chr2L 2119806 intergenic not near genes chr2L_4_2115001 chr2L_2115001 RAL-306_75b 20 chr2L 2260808 2260833 chr2L 2260891 2260919 6 86 0.0 0.5 0.2 5.0 111 chr2L 2260808 intergenic not near genes chr2L 2260864 intergenic not near genes chr2L 2260919 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RAL-306_75b 21 chr2L 2396320 2396336 chr2L 2396441 2396457 5 121 1.0 2.0 1.5 2.0 137 chr2L 2396320 intron VGlut + chr2L 2396388 intron VGlut + chr2L 2396457 intron VGlut + chr2L_5_2395001 chr2L_2395001 RAL-306_75b 22 chr2L 2661210 2661229 chr2L 2663047 2663067 I-element 4 1836 0.5 1.0 0.8 2.2 1857 chr2L 2661210 intergenic not near genes chr2L 2662138 intergenic not near genes chr2L 2663067 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-306_75b 23 chr2L 2667630 2667648 chr2L 2667709 2667727 5 79 1.5 2.5 2.0 1.7 97 chr2L 2667630 intergenic not near genes chr2L 2667678 intergenic not near genes chr2L 2667727 intergenic not near genes chr2L_5_2665001 chr2L_2665001 RAL-306_75b 24 chr2L 2692334 2692360 chr2L 2692415 2692441 7 81 0.0 0.5 0.2 5.8 107 chr2L 2692334 intron CG31690 + chr2L 2692388 intron CG31690 + chr2L 2692441 intron CG31690 + chr2L_7_2690001 chr2L_2690001 RAL-306_75b 25 chr2L 2713511 2713520 chr2L 2713610 2713619 4 99 3.5 2.5 3.0 1.0 108 chr2L 2713511 intron CG31690 + chr2L 2713565 intron CG31690 + chr2L 2713619 intron CG31690 + chr2L_4_2710001 chr2L_2710001 RAL-306_75b 26 chr2L 3073031 3073058 chr2L 3078234 3078261 copia 15 5203 2.0 1.5 1.8 5.4 5230 chr2L 3073031 intron toc - chr2L 3075646 intron toc - chr2L 3078261 intron toc - chr2L_15_3075001 chr2L_3075001 RAL-306_75b 27 chr2L 3108870 3108881 chr2L 3108947 3108955 4 76 1.5 1.5 1.5 1.6 85 chr2L 3108870 intron toc - chr2L 3108912 intron toc - chr2L 3108955 intron toc - chr2L_4_3105001 chr2L_3105001 RAL-306_75b 28 chr2L 3193829 3193858 chr2L 3193915 3193944 9 86 1.0 0.5 0.8 5.0 115 chr2L 3193829 intron CG34393 - chr2L 3193886 intron CG34393 - chr2L 3193944 intron CG34393 - chr2L_9_3190001 chr2L_3190001 RAL-306_75b 29 chr2L 3202740 3202770 chr2L 3210169 3210198 mdg1 13 7428 1.5 3.0 2.2 4.1 7458 chr2L 3202740 intergenic not near genes chr2L 3206469 intergenic not near genes chr2L 3210198 intergenic CR45336 + chr2L_13_3205001 chr2L_3205001 RAL-306_75b 30 chr2L 3251495 3251510 chr2L 3259060 3259075 springer 5 7565 1.0 1.5 1.2 2.3 7580 chr2L 3251495 intergenic not near genes chr2L 3255285 intergenic not near genes chr2L 3259075 intergenic not near genes chr2L_5_3255001 chr2L_3255001 RAL-306_75b 31 chr2L 3497839 3497870 chr2L 3497917 3497948 7 78 1.0 1.5 1.2 3.2 109 chr2L 3497839 intron tim - chr2L 3497894 intron tim - chr2L 3497948 intron tim - chr2L_7_3495001 chr2L_3495001 RAL-306_75b 32 chr2L 3508352 3508375 chr2L 3508430 3508453 9 77 1.0 1.0 1.0 4.5 101 chr2L 3508352 intergenic tim -,CR45299 + chr2L 3508402 intergenic CR45299 +,tim - chr2L 3508453 intergenic CR45299 +,tim - chr2L_9_3505001 chr2L_3505001 RAL-306_75b 33 chr2L 3667973 3668066 chr2L 3668050 3668142 5 77 0.0 0.0 0.0 5.0 169 chr2L 3667973 intron CG34340 + chr2L 3668058 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668142 intron,exon CG34340 +,Sfp24Ba - chr2L_5_3665001 chr2L_3665001 RAL-306_75b 34 chr2L 3686031 3686046 chr2L 3686119 3686134 4 88 0.0 0.5 0.2 3.3 103 chr2L 3686031 intron CG34340 + chr2L 3686082 intron CG34340 + chr2L 3686134 intron CG34340 + chr2L_4_3685001 chr2L_3685001 RAL-306_75b 35 chr2L 3702904 3702920 chr2L 3702990 3703006 5 86 4.5 0.0 2.2 1.6 102 chr2L 3702904 5` UTR CR44311 + chr2L 3702955 intergenic CR44311 + chr2L 3703006 intergenic CR44311 + chr2L_5_3700001 chr2L_3700001 RAL-306_75b 36 chr2L 3768571 3768589 chr2L 3768653 3768671 5 82 0.0 2.0 1.0 2.5 100 chr2L 3768571 3` UTR CG43707 + chr2L 3768621 3` UTR CG43707 + chr2L 3768671 3` UTR CG43707 + chr2L_5_3765001 chr2L_3765001 RAL-306_75b 37 chr2L 3959182 3959203 chr2L 3959258 3959279 4 76 1.5 1.0 1.2 1.8 97 chr2L 3959182 intron fred - chr2L 3959230 intron fred - chr2L 3959279 intron fred - chr2L_4_3955001 chr2L_3955001 RAL-306_75b 38 chr2L 3960567 3960580 chr2L 3960737 3960749 7 169 2.5 2.5 2.5 2.0 182 chr2L 3960567 intron fred - chr2L 3960658 intron fred - chr2L 3960749 intron fred - chr2L_7_3960001 chr2L_3960001 RAL-306_75b 39 chr2L 4038507 4038528 chr2L 4039365 4039386 6 858 0.0 0.5 0.2 5.0 879 chr2L 4038507 intron ed + chr2L 4038946 intron ed + chr2L 4039386 intron ed + chr2L_6_4035001 chr2L_4035001 RAL-306_75b 40 chr2L 4166376 4166401 chr2L 4166459 4166484 9 83 1.5 1.0 1.2 4.1 108 chr2L 4166376 intergenic Or24a - chr2L 4166430 intergenic Or24a - chr2L 4166484 intergenic Or24a - chr2L_9_4165001 chr2L_4165001 RAL-306_75b 41 chr2L 4181292 4181305 chr2L 4183924 4183937 Burdock 9 2631 0.5 0.0 0.2 7.5 2645 chr2L 4181292 intergenic not near genes chr2L 4182614 intergenic not near genes chr2L 4183937 intergenic not near genes chr2L_9_4180001 chr2L_4180001 RAL-306_75b 42 chr2L 4656543 4656569 chr2L 4656621 4656647 4 78 0.0 1.0 0.5 2.7 104 chr2L 4656543 intergenic not near genes chr2L 4656595 intergenic not near genes chr2L 4656647 intergenic not near genes chr2L_4_4655001 chr2L_4655001 RAL-306_75b 43 chr2L 4841082 4841102 chr2L 4841158 4841178 4 76 2.0 2.0 2.0 1.3 96 chr2L 4841082 intron CG12194 + chr2L 4841130 intron CG12194 + chr2L 4841178 exon CG12194 + chr2L_4_4840001 chr2L_4840001 RAL-306_75b 44 chr2L 4918165 4918191 chr2L 4923238 4923264 jockey 5 5073 3.5 3.5 3.5 1.1 5099 chr2L 4918165 intron hoe1 - chr2L 4920714 intron hoe1 - chr2L 4923264 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-306_75b 45 chr2L 5092425 5092434 chr2L 5092512 5092521 4 87 0.0 1.0 0.5 2.7 96 chr2L 5092425 intron pgant5 - chr2L 5092473 intron pgant5 - chr2L 5092521 intron pgant5 - chr2L_4_5090001 chr2L_5090001 RAL-306_75b 46 chr2L 5207303 5207325 chr2L 5209318 5209340 4 2015 23.5 16.5 20.0 0.2 2037 chr2L 5207303 5` UTR Cyp28d2 + chr2L 5208322 exon Cyp28d2 + chr2L 5209340 3` UTR Cyp28d2 + chr2L_4_5205001 chr2L_5205001 RAL-306_75b 47 chr2L 5206806 5206836 chr2L 5209752 5209781 13 2945 16.0 18.0 17.0 0.7 2975 chr2L 5206806 3` UTR Msp300 + chr2L 5208294 exon Cyp28d2 + chr2L 5209781 intergenic Cyp28d2 + chr2L_13_5205001 chr2L_5205001 RAL-306_75b 48 chr2L 5276726 5276729 chr2L 5276808 5276813 5 83 0.0 1.5 0.8 2.8 87 chr2L 5276726 exon Bsg25D - chr2L 5276770 intron Bsg25D - chr2L 5276813 intron Bsg25D - chr2L_5_5275001 chr2L_5275001 RAL-306_75b 49 chr2L 5284398 5284401 chr2L 5284484 5284487 4 86 4.0 0.5 2.2 1.2 89 chr2L 5284398 intergenic not near genes chr2L 5284442 intergenic not near genes chr2L 5284487 intergenic not near genes chr2L_4_5280001 chr2L_5280001 RAL-306_75b 50 chr2L 5342770 5342800 chr2L 5345150 5345180 Doc 6 2380 1.0 2.0 1.5 2.4 2410 chr2L 5342770 intergenic not near genes chr2L 5343975 intergenic not near genes chr2L 5345180 intergenic not near genes chr2L_6_5340001 chr2L_5340001 RAL-306_75b 51 chr2L 5511341 5511358 chr2L 5511424 5511441 6 83 0.5 2.5 1.5 2.4 100 chr2L 5511341 intergenic not near genes chr2L 5511391 intergenic not near genes chr2L 5511441 intergenic not near genes chr2L_6_5510001 chr2L_5510001 RAL-306_75b 52 chr2L 5695873 5695892 chr2L 5695965 5695984 7 92 0.0 1.5 0.8 3.9 111 chr2L 5695873 intergenic not near genes chr2L 5695928 intergenic not near genes chr2L 5695984 intergenic not near genes chr2L_7_5695001 chr2L_5695001 RAL-306_75b 53 chr2L 5815074 5815086 chr2L 5815151 5815163 4 77 1.5 0.0 0.8 2.2 89 chr2L 5815074 intergenic not near genes chr2L 5815118 intergenic not near genes chr2L 5815163 intergenic not near genes chr2L_4_5815001 chr2L_5815001 RAL-306_75b 54 chr2L 5826060 5826085 chr2L 5826142 5826167 5 82 0.0 1.5 0.8 2.8 107 chr2L 5826060 intron TrissinR + chr2L 5826114 intron TrissinR + chr2L 5826167 intron TrissinR + chr2L_5_5825001 chr2L_5825001 RAL-306_75b 55 chr2L 5827711 5827732 chr2L 5836719 5836740 roo 4 9008 4.5 2.5 3.5 0.9 9029 chr2L 5827711 intron TrissinR + chr2L 5832226 intron TrissinR + chr2L 5836740 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-306_75b 56 chr2L 5878597 5878606 chr2L 5878681 5878690 4 83 1.5 1.0 1.2 1.8 93 chr2L 5878597 intron rau - chr2L 5878644 intron rau - chr2L 5878690 intron rau - chr2L_4_5875001 chr2L_5875001 RAL-306_75b 57 chr2L 5931317 5931319 chr2L 5931429 5931431 4 112 1.5 3.0 2.2 1.2 114 chr2L 5931317 intron dsf + chr2L 5931374 intron dsf + chr2L 5931431 intron dsf + chr2L_4_5930001 chr2L_5930001 RAL-306_75b 58 chr2L 6007098 6007122 chr2L 6007174 6007198 4 76 0.5 0.0 0.2 3.3 100 chr2L 6007098 intergenic CG9098 -,Gal - chr2L 6007148 intergenic CG9098 -,Gal - chr2L 6007198 intergenic CG9098 -,Gal - chr2L_4_6005001 chr2L_6005001 RAL-306_75b 59 chr2L 6185443 6185473 chr2L 6185521 6185551 4 78 0.5 1.5 1.0 2.0 108 chr2L 6185443 intron CG34380 + chr2L 6185497 intron CG34380 + chr2L 6185551 intron CG34380 + chr2L_4_6185001 chr2L_6185001 RAL-306_75b 60 chr2L 6544375 6544390 chr2L 6544467 6544480 7 91 2.5 0.5 1.5 2.8 105 chr2L 6544375 intron eya - chr2L 6544428 intron eya - chr2L 6544480 intron eya - chr2L_7_6540001 chr2L_6540001 RAL-306_75b 61 chr2L 6655534 6655542 chr2L 6655896 6655901 4 361 1.0 1.5 1.2 1.8 367 chr2L 6655534 exon CG31633 - chr2L 6655718 exon CG31633 - chr2L 6655901 exon CG31633 - chr2L_4_6655001 chr2L_6655001 RAL-306_75b 62 chr2L 6771984 6772022 chr2L 6772070 6772109 4 87 0.0 0.5 0.2 3.3 125 chr2L 6771984 intron CG11321 - chr2L 6772046 intron CG11321 - chr2L 6772109 intron CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-306_75b 63 chr2L 6795209 6795224 chr2L 6795290 6795305 4 81 1.5 0.5 1.0 2.0 96 chr2L 6795209 intron nrv2 - chr2L 6795257 intron nrv2 - chr2L 6795305 intron nrv2 - chr2L_4_6795001 chr2L_6795001 RAL-306_75b 64 chr2L 6799558 6799571 chr2L 6799646 6799659 6 88 1.0 1.5 1.2 2.7 101 chr2L 6799558 5` UTR CR43610 + chr2L 6799608 intergenic CR43610 +,CG17376 - chr2L 6799659 intergenic CR43610 +,CG17376 - chr2L_6_6795001 chr2L_6795001 RAL-306_75b 65 chr2L 7030092 7030107 chr2L 7030172 7030188 4 81 0.0 2.5 1.2 1.8 96 chr2L 7030092 intergenic Rab30 - chr2L 7030140 intergenic Rab30 - chr2L 7030188 intergenic Rab30 - chr2L_4_7030001 chr2L_7030001 RAL-306_75b 66 chr2L 7126865 7126877 chr2L 7126944 7126956 5 79 1.5 0.0 0.8 2.8 91 chr2L 7126865 intron Pvf3 - chr2L 7126910 intron Pvf3 - chr2L 7126956 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-306_75b 67 chr2L 7235123 7235145 chr2L 7235217 7235238 4 94 0.0 0.5 0.2 3.3 115 chr2L 7235123 intron Ndae1 - chr2L 7235180 intron Ndae1 - chr2L 7235238 intron Ndae1 - chr2L_4_7235001 chr2L_7235001 RAL-306_75b 68 chr2L 7406949 7406961 chr2L 7407056 7407067 4 106 0.0 0.0 0.0 4.0 118 chr2L 7406949 intron CG5177 + chr2L 7407008 intron CG5177 + chr2L 7407067 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-306_75b 69 chr2L 7493677 7493703 chr2L 7493888 7493913 7 211 1.5 0.0 0.8 3.9 236 chr2L 7493677 intron Ziz - chr2L 7493795 intron Ziz - chr2L 7493913 intron Ziz - chr2L_7_7490001 chr2L_7490001 RAL-306_75b 70 chr2L 7535827 7535862 chr2L 7535916 7535951 5 89 0.5 1.0 0.8 2.8 124 chr2L 7535827 intron RapGAP1 - chr2L 7535889 intron RapGAP1 - chr2L 7535951 intron RapGAP1 - chr2L_5_7535001 chr2L_7535001 RAL-306_75b 71 chr2L 7569720 7569745 chr2L 7571014 7571039 11 1294 7.5 10.5 9.0 1.1 1319 chr2L 7569720 intron RapGAP1 - chr2L 7570380 intron RapGAP1 - chr2L 7571039 intron RapGAP1 - chr2L_11_7570001 chr2L_7570001 RAL-306_75b 72 chr2L 7656067 7656086 chr2L 7656180 7656199 8 113 1.0 1.5 1.2 3.6 132 chr2L 7656067 exon Slob - chr2L 7656133 exon Slob - chr2L 7656199 exon Slob - chr2L_8_7655001 chr2L_7655001 RAL-306_75b 73 chr2L 7867572 7867600 chr2L 7867666 7867694 8 94 3.0 1.0 2.0 2.7 122 chr2L 7867572 intron Proc - chr2L 7867633 intron Proc - chr2L 7867694 intron Proc - chr2L_8_7865001 chr2L_7865001 RAL-306_75b 74 chr2L 7921099 7921120 chr2L 7921186 7921205 4 86 0.5 0.5 0.5 2.7 106 chr2L 7921099 intron Snoo - chr2L 7921152 intron Snoo - chr2L 7921205 intron Snoo - chr2L_4_7920001 chr2L_7920001 RAL-306_75b 75 chr2L 8013615 8013625 chr2L 8018819 8018828 copia 4 5204 3.0 0.0 1.5 1.6 5213 chr2L 8013615 intron Tg + chr2L 8016222 intron Tg + chr2L 8018828 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-306_75b 76 chr2L 8286294 8286322 chr2L 8286381 8286409 4 87 1.0 0.5 0.8 2.2 115 chr2L 8286294 intron Btk29A - chr2L 8286352 intron Btk29A - chr2L 8286409 intron Btk29A - chr2L_4_8285001 chr2L_8285001 RAL-306_75b 77 chr2L 8452433 8452447 chr2L 8461604 8461618 roo 5 9171 1.5 2.5 2.0 1.7 9185 chr2L 8452433 intron fu12 - chr2L 8457026 intron fu12 - chr2L 8461618 intron fu12 - chr2L_5_8455001 chr2L_8455001 RAL-306_75b 78 chr2L 8508990 8509003 chr2L 8509092 8509105 4 102 0.0 0.5 0.2 3.3 115 chr2L 8508990 intergenic CG13096 - chr2L 8509048 intergenic CG13096 - chr2L 8509105 3` UTR CG13096 - chr2L_4_8505001 chr2L_8505001 RAL-306_75b 79 chr2L 8588903 8588922 chr2L 8588994 8589013 4 91 1.0 1.5 1.2 1.8 110 chr2L 8588903 intron Sema-1a + chr2L 8588958 intron Sema-1a + chr2L 8589013 intron Sema-1a + chr2L_4_8585001 chr2L_8585001 RAL-306_75b 80 chr2L 8723117 8723141 chr2L 8731494 8731514 Tirant 4 8376 0.5 0.5 0.5 2.7 8397 chr2L 8723117 intron raw - chr2L 8727316 intron raw - chr2L 8731514 intron raw - chr2L_4_8725001 chr2L_8725001 RAL-306_75b 81 chr2L 8772795 8772805 chr2L 8772880 8772890 6 84 0.5 0.0 0.2 5.0 95 chr2L 8772795 intergenic CG9466 -,CG9465 - chr2L 8772842 intergenic CG9466 -,CG9465 - chr2L 8772890 intergenic CG9466 - chr2L_6_8770001 chr2L_8770001 RAL-306_75b 82 chr2L 8820935 8820956 chr2L 8821013 8821035 5 79 1.0 1.0 1.0 2.5 100 chr2L 8820935 intergenic not near genes chr2L 8820985 intergenic not near genes chr2L 8821035 intergenic not near genes chr2L_5_8820001 chr2L_8820001 RAL-306_75b 83 chr2L 8959311 8959312 chr2L 8959389 8959390 4 78 0.5 3.0 1.8 1.4 79 chr2L 8959311 3` UTR CG9525 - chr2L 8959350 3` UTR CG9525 - chr2L 8959390 3` UTR CG9525 - chr2L_4_8955001 chr2L_8955001 RAL-306_75b 84 chr2L 9084337 9084339 chr2L 16217660 16217660 5 7133321 6.5 9.0 7.8 0.6 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-306_75b 85 chr2L 9287322 9287345 chr2L 9287419 9287442 5 97 4.0 0.0 2.0 1.7 120 chr2L 9287322 intron Ggamma30A + chr2L 9287382 intron Ggamma30A + chr2L 9287442 intron Ggamma30A + chr2L_5_9285001 chr2L_9285001 RAL-306_75b 86 chr2L 9304504 9304517 chr2L 9304583 9304596 4 79 0.5 2.0 1.2 1.8 92 chr2L 9304504 3` UTR CR42844 - chr2L 9304550 3` UTR CR42844 - chr2L 9304596 3` UTR CR42844 - chr2L_4_9300001 chr2L_9300001 RAL-306_75b 87 chr2L 9490529 9490535 chr2L 9490609 9490615 5 80 2.5 2.0 2.2 1.6 86 chr2L 9490529 intergenic not near genes chr2L 9490572 intergenic not near genes chr2L 9490615 intergenic not near genes chr2L_5_9490001 chr2L_9490001 RAL-306_75b 88 chr2L 9532037 9532060 chr2L 9532122 9532144 6 84 2.5 0.0 1.2 2.7 107 chr2L 9532037 intron Oatp30B + chr2L 9532090 intron Oatp30B + chr2L 9532144 intron Oatp30B + chr2L_6_9530001 chr2L_9530001 RAL-306_75b 89 chr2L 9618896 9618915 chr2L 9618972 9618992 5 77 3.5 0.5 2.0 1.7 96 chr2L 9618896 intron GlcAT-S + chr2L 9618944 intron GlcAT-S + chr2L 9618992 intron GlcAT-S + chr2L_5_9615001 chr2L_9615001 RAL-306_75b 90 chr2L 9665832 9665848 chr2L 9665912 9665928 4 80 0.0 0.0 0.0 4.0 96 chr2L 9665832 intergenic not near genes chr2L 9665880 intergenic not near genes chr2L 9665928 intergenic not near genes chr2L_4_9665001 chr2L_9665001 RAL-306_75b 91 chr2L 9973729 9973748 chr2L 9980848 9980867 HMS-Beagle 10 7118 2.0 3.0 2.5 2.9 7138 chr2L 9973729 intergenic not near genes chr2L 9977298 intergenic not near genes chr2L 9980867 intergenic not near genes chr2L_10_9975001 chr2L_9975001 RAL-306_75b 92 chr2L 10105287 10105315 chr2L 10105363 10105391 4 76 1.5 0.5 1.0 2.0 104 chr2L 10105287 intron,intron CG44153 -,CG34109 + chr2L 10105339 intron,intron CG44153 -,CG34109 + chr2L 10105391 intron,intron CG44153 -,CG34109 + chr2L_4_10105001 chr2L_10105001 RAL-306_75b 93 chr2L 10108984 10108997 chr2L 10109067 10109080 4 83 2.0 1.0 1.5 1.6 96 chr2L 10108984 intron,intron CG44153 -,CG34109 + chr2L 10109032 intron,intron CG44153 -,CG34109 + chr2L 10109080 intron,intron CG44153 -,CG34109 + chr2L_4_10105001 chr2L_10105001 RAL-306_75b 94 chr2L 10153210 10153233 chr2L 10153289 10153312 8 78 0.5 1.0 0.8 4.4 102 chr2L 10153210 intron,exon CG44153 -,CG4839 + chr2L 10153261 intron,intron CG44153 -,CG4839 + chr2L 10153312 intron,intron CG44153 -,CG4839 + chr2L_8_10150001 chr2L_10150001 RAL-306_75b 95 chr2L 10227528 10227552 chr2L 10227604 10227628 4 76 2.5 2.0 2.2 1.2 100 chr2L 10227528 intergenic CG5694 - chr2L 10227578 intergenic CG5694 - chr2L 10227628 intergenic CG5694 - chr2L_4_10225001 chr2L_10225001 RAL-306_75b 96 chr2L 10447075 10447095 chr2L 10447185 10447205 6 110 0.0 0.0 0.0 6.0 130 chr2L 10447075 intron loh + chr2L 10447140 intron loh + chr2L 10447205 intron loh + chr2L_6_10445001 chr2L_10445001 RAL-306_75b 97 chr2L 10495311 10495465 chr2L 10495388 10495551 6 84 0.0 0.0 0.0 6.0 240 chr2L 10495311 intron Myo31DF - chr2L 10495431 intron Myo31DF - chr2L 10495551 intron Myo31DF - chr2L_6_10495001 chr2L_10495001 RAL-306_75b 98 chr2L 10531618 10531644 chr2L 10531710 10531736 4 92 0.0 2.0 1.0 2.0 118 chr2L 10531618 3` UTR Lip4 + chr2L 10531677 3` UTR Lip4 + chr2L 10531736 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 RAL-306_75b 99 chr2L 10698130 10698136 chr2L 10698213 10698219 4 82 2.0 1.5 1.8 1.4 89 chr2L 10698130 5` UTR CR44181 + chr2L 10698174 5` UTR CR44181 + chr2L 10698219 intergenic CR44181 +,CG7300 - chr2L_4_10695001 chr2L_10695001 RAL-306_75b 100 chr2L 10705449 10705474 chr2L 10705532 10705557 5 83 0.5 0.0 0.2 4.2 108 chr2L 10705449 exon Lip2 - chr2L 10705503 intron Lip2 - chr2L 10705557 intron Lip2 - chr2L_5_10705001 chr2L_10705001 RAL-306_75b 101 chr2L 10862865 10862877 chr2L 10864474 10864488 Rt1c 4 1612 0.0 2.0 1.0 2.0 1623 chr2L 10862865 3` UTR CR43807 - chr2L 10863676 intron CR43807 - chr2L 10864488 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-306_75b 102 chr2L 11012300 11012327 chr2L 11012387 11012415 5 88 1.0 1.0 1.0 2.5 115 chr2L 11012300 intergenic dUTPase + chr2L 11012358 intergenic dUTPase + chr2L 11012415 intergenic dUTPase + chr2L_5_11010001 chr2L_11010001 RAL-306_75b 103 chr2L 11540593 11540616 chr2L 11547995 11548017 Tabor 10 7402 0.0 1.5 0.8 5.6 7424 chr2L 11540593 intergenic not near genes chr2L 11544305 intergenic not near genes chr2L 11548017 intergenic not near genes chr2L_10_11540001 chr2L_11540001 RAL-306_75b 104 chr2L 11657979 11658001 chr2L 11658064 11658085 4 84 0.5 4.0 2.2 1.2 106 chr2L 11657979 3` UTR CG43167 + chr2L 11658032 intergenic CG43167 + chr2L 11658085 intergenic CG43167 + chr2L_4_11655001 chr2L_11655001 RAL-306_75b 105 chr2L 11713507 11713538 chr2L 11720975 11721006 blood 11 7468 1.5 1.5 1.5 4.4 7499 chr2L 11713507 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721006 intergenic CR44143 + chr2L_11_11715001 chr2L_11715001 RAL-306_75b 106 chr2L 12031395 12031400 chr2L 12031476 12031481 4 81 1.0 1.5 1.2 1.8 86 chr2L 12031395 intron dmGlut + chr2L 12031438 intron dmGlut + chr2L 12031481 intron dmGlut + chr2L_4_12030001 chr2L_12030001 RAL-306_75b 107 chr2L 12067338 12067359 chr2L 12074390 12074411 297 4 7052 1.0 0.5 0.8 2.2 7073 chr2L 12067338 intergenic not near genes chr2L 12070874 intergenic not near genes chr2L 12074411 intergenic not near genes chr2L_4_12070001 chr2L_12070001 RAL-306_75b 108 chr2L 12132731 12132749 chr2L 12132817 12132835 5 86 1.0 1.0 1.0 2.5 104 chr2L 12132731 intron rho-6 - chr2L 12132783 intron rho-6 - chr2L 12132835 intron rho-6 - chr2L_5_12130001 chr2L_12130001 RAL-306_75b 109 chr2L 12224891 12224898 chr2L 12224967 12224970 5 75 0.0 4.0 2.0 1.7 79 chr2L 12224891 intron aret + chr2L 12224930 intron aret + chr2L 12224970 intron aret + chr2L_5_12220001 chr2L_12220001 RAL-306_75b 110 chr2L 12263949 12263971 chr2L 12264031 12264053 5 81 0.0 2.0 1.0 2.5 104 chr2L 12263949 intron aret + chr2L 12264001 intron aret + chr2L 12264053 intron aret + chr2L_5_12260001 chr2L_12260001 RAL-306_75b 111 chr2L 12272441 12272467 chr2L 12272527 12272554 8 86 3.0 0.5 1.8 2.9 113 chr2L 12272441 intron aret + chr2L 12272498 intron aret + chr2L 12272554 intron aret + chr2L_8_12270001 chr2L_12270001 RAL-306_75b 112 chr2L 12422459 12422466 chr2L 12422542 12422549 4 84 2.0 0.0 1.0 2.0 90 chr2L 12422459 intron vir-1 - chr2L 12422504 intron vir-1 - chr2L 12422549 intron vir-1 - chr2L_4_12420001 chr2L_12420001 RAL-306_75b 113 chr2L 12529234 12529264 chr2L 12529386 12529416 8 152 1.5 1.5 1.5 3.2 182 chr2L 12529234 intron bun - chr2L 12529325 intron bun - chr2L 12529416 intron bun - chr2L_8_12525001 chr2L_12525001 RAL-306_75b 114 chr2L 12682884 12682904 chr2L 12682962 12682983 4 79 1.0 3.0 2.0 1.3 99 chr2L 12682884 intron pdm2 + chr2L 12682934 intron pdm2 + chr2L 12682983 intron pdm2 + chr2L_4_12680001 chr2L_12680001 RAL-306_75b 115 chr2L 12731055 12731089 chr2L 12735822 12735856 F-element 6 4767 0.0 2.0 1.0 3.0 4801 chr2L 12731055 intron MRP + chr2L 12733456 intron MRP + chr2L 12735856 intron MRP + chr2L_6_12730001 chr2L_12730001 RAL-306_75b 116 chr2L 12739175 12739200 chr2L 12743956 12743981 Doc 6 4781 2.0 1.5 1.8 2.1 4806 chr2L 12739175 exon MRP + chr2L 12741578 intron MRP + chr2L 12743981 exon MRP + chr2L_6_12740001 chr2L_12740001 RAL-306_75b 117 chr2L 12835557 12835586 chr2L 12835666 12835695 4 109 0.0 0.5 0.2 3.3 138 chr2L 12835557 intergenic not near genes chr2L 12835626 intergenic not near genes chr2L 12835695 intergenic not near genes chr2L_4_12835001 chr2L_12835001 RAL-306_75b 118 chr2L 12848450 12848464 chr2L 12848538 12848552 5 88 0.0 0.0 0.0 5.0 102 chr2L 12848450 intergenic not near genes chr2L 12848501 intergenic not near genes chr2L 12848552 intergenic not near genes chr2L_5_12845001 chr2L_12845001 RAL-306_75b 119 chr2L 12894024 12894037 chr2L 12895491 12895504 hobo 4 1467 1.5 2.0 1.8 1.4 1480 chr2L 12894024 intergenic not near genes chr2L 12894764 intergenic not near genes chr2L 12895504 intergenic not near genes chr2L_4_12890001 chr2L_12890001 RAL-306_75b 120 chr2L 13032505 13032520 chr2L 13032601 13032616 4 96 1.0 3.0 2.0 1.3 111 chr2L 13032505 intron CG9932 - chr2L 13032560 intron CG9932 - chr2L 13032616 intron CG9932 - chr2L_4_13030001 chr2L_13030001 RAL-306_75b 121 chr2L 13043682 13043694 chr2L 13043758 13043770 4 76 0.5 2.5 1.5 1.6 88 chr2L 13043682 intron CG9932 - chr2L 13043726 intron CG9932 - chr2L 13043770 intron CG9932 - chr2L_4_13040001 chr2L_13040001 RAL-306_75b 122 chr2L 13049382 13049406 chr2L 13049470 13049492 5 87 1.5 1.5 1.5 2.0 110 chr2L 13049382 intron CG9932 - chr2L 13049437 intron CG9932 - chr2L 13049492 intron CG9932 - chr2L_5_13045001 chr2L_13045001 RAL-306_75b 123 chr2L 13369310 13369339 chr2L 13369387 13369416 9 77 0.0 1.5 0.8 5.0 106 chr2L 13369310 5` UTR CG31855 + chr2L 13369363 5` UTR CG31855 + chr2L 13369416 exon CG31855 + chr2L_9_13365001 chr2L_13365001 RAL-306_75b 124 chr2L 13398725 13398729 chr2L 13398805 13398809 4 80 1.0 2.0 1.5 1.6 84 chr2L 13398725 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398767 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398809 intergenic CR44600 -,CG10859 -,CG7110 + chr2L_4_13395001 chr2L_13395001 RAL-306_75b 125 chr2L 13522136 13522148 chr2L 13527654 13527666 Transpac 5 5518 0.0 1.5 0.8 2.8 5530 chr2L 13522136 intron B4 - chr2L 13524901 intron B4 - chr2L 13527666 intron B4 - chr2L_5_13520001 chr2L_13520001 RAL-306_75b 126 chr2L 13536011 13536028 chr2L 13536196 13536213 8 185 2.5 0.5 1.5 3.2 202 chr2L 13536011 intron B4 - chr2L 13536112 intron B4 - chr2L 13536213 intron B4 - chr2L_8_13535001 chr2L_13535001 RAL-306_75b 127 chr2L 13622139 13622156 chr2L 13622234 13622255 5 98 1.0 0.0 0.5 3.3 116 chr2L 13622139 intron kuz + chr2L 13622197 intron kuz + chr2L 13622255 intron kuz + chr2L_5_13620001 chr2L_13620001 RAL-306_75b 128 chr2L 13713560 13713563 chr2L 13713636 13713638 4 76 2.0 1.5 1.8 1.4 78 chr2L 13713560 intron CG31814 - chr2L 13713599 intron CG31814 - chr2L 13713638 intron CG31814 - chr2L_4_13710001 chr2L_13710001 RAL-306_75b 129 chr2L 13740880 13740905 chr2L 13740978 13741003 4 98 2.5 2.0 2.2 1.2 123 chr2L 13740880 intergenic not near genes chr2L 13740942 intergenic not near genes chr2L 13741003 intergenic not near genes chr2L_4_13740001 chr2L_13740001 RAL-306_75b 130 chr2L 13842151 13842158 chr2L 13842235 13842242 4 84 2.0 0.0 1.0 2.0 91 chr2L 13842151 intron CenG1A + chr2L 13842196 intron CenG1A + chr2L 13842242 intron CenG1A + chr2L_4_13840001 chr2L_13840001 RAL-306_75b 131 chr2L 13853106 13853115 chr2L 13862256 13862265 roo 5 9150 3.5 2.0 2.8 1.3 9159 chr2L 13853106 intron CenG1A + chr2L 13857686 intron CenG1A + chr2L 13862265 intron CenG1A + chr2L_5_13855001 chr2L_13855001 RAL-306_75b 132 chr2L 14151616 14151618 chr2L 14151694 14151696 6 78 2.5 1.5 2.0 2.0 80 chr2L 14151616 intron CG17341 + chr2L 14151656 intron CG17341 + chr2L 14151696 intron CG17341 + chr2L_6_14150001 chr2L_14150001 RAL-306_75b 133 chr2L 14160685 14160717 chr2L 14160771 14160803 10 86 0.5 1.0 0.8 5.6 118 chr2L 14160685 intergenic CG17341 +,CG43332 - chr2L 14160744 intergenic CG17341 +,CG43332 - chr2L 14160803 intergenic CG17341 +,CG43332 - chr2L_10_14160001 chr2L_14160001 RAL-306_75b 134 chr2L 14180063 14180092 chr2L 14180138 14180168 7 76 1.0 3.5 2.2 2.2 105 chr2L 14180063 intron CG43333 - chr2L 14180116 intron CG43333 - chr2L 14180168 intron CG43333 - chr2L_7_14180001 chr2L_14180001 RAL-306_75b 135 chr2L 14290110 14290122 chr2L 14290192 14290204 5 82 1.5 2.0 1.8 1.8 94 chr2L 14290110 intron wb + chr2L 14290157 intron wb + chr2L 14290204 intron wb + chr2L_5_14290001 chr2L_14290001 RAL-306_75b 136 chr2L 14452448 14452475 chr2L 14452558 14452584 5 110 0.5 1.0 0.8 2.8 136 chr2L 14452448 intergenic not near genes chr2L 14452516 intergenic not near genes chr2L 14452584 intergenic not near genes chr2L_5_14450001 chr2L_14450001 RAL-306_75b 137 chr2L 14525582 14525603 chr2L 14525664 14525685 5 82 2.5 7.0 4.8 0.9 103 chr2L 14525582 exon CG33648 + chr2L 14525634 3` UTR CG33648 + chr2L 14525685 intergenic CG33648 + chr2L_5_14525001 chr2L_14525001 RAL-306_75b 138 chr2L 14547116 14547143 chr2L 14547198 14547222 8 82 0.5 0.0 0.2 6.7 106 chr2L 14547116 intergenic CG4218 - chr2L 14547169 intergenic CG4218 - chr2L 14547222 intergenic CG4218 - chr2L_8_14545001 chr2L_14545001 RAL-306_75b 139 chr2L 14588388 14588413 chr2L 14588541 14588567 8 154 1.0 2.0 1.5 3.2 179 chr2L 14588388 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588567 intergenic CG42680 - chr2L_8_14585001 chr2L_14585001 RAL-306_75b 140 chr2L 14601977 14601999 chr2L 14602061 14602083 4 84 0.0 3.0 1.5 1.6 106 chr2L 14601977 exon osp - chr2L 14602030 intron osp - chr2L 14602083 intron osp - chr2L_4_14600001 chr2L_14600001 RAL-306_75b 141 chr2L 14642573 14642576 chr2L 14651736 14651739 roo 4 9163 0.5 0.0 0.2 3.3 9166 chr2L 14642573 intron osp - chr2L 14647156 intron osp - chr2L 14651739 intron osp - chr2L_4_14645001 chr2L_14645001 RAL-306_75b 142 chr2L 14889960 14889983 chr2L 14890385 14890408 jockey 8 425 1.5 0.5 1.0 4.0 448 chr2L 14889960 intergenic not near genes chr2L 14890184 intergenic not near genes chr2L 14890408 intergenic not near genes chr2L_8_14890001 chr2L_14890001 RAL-306_75b 143 chr2L 15021460 15021466 chr2L 15021536 15021542 4 76 6.0 1.5 3.8 0.8 82 chr2L 15021460 intron GABA-B-R1 + chr2L 15021501 intron GABA-B-R1 + chr2L 15021542 intron GABA-B-R1 + chr2L_4_15020001 chr2L_15020001 RAL-306_75b 144 chr2L 15044709 15044729 chr2L 15044785 15044805 5 76 1.5 0.0 0.8 2.8 96 chr2L 15044709 intergenic ck - chr2L 15044757 intergenic ck - chr2L 15044805 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-306_75b 145 chr2L 15195389 15195402 chr2L 15195494 15195507 4 105 0.5 1.5 1.0 2.0 118 chr2L 15195389 intron CG4168 - chr2L 15195448 intron CG4168 - chr2L 15195507 intron CG4168 - chr2L_4_15195001 chr2L_15195001 RAL-306_75b 146 chr2L 15514316 15514331 chr2L 15514399 15514414 5 83 3.0 3.0 3.0 1.2 98 chr2L 15514316 intergenic not near genes chr2L 15514365 intergenic not near genes chr2L 15514414 intergenic not near genes chr2L_5_15510001 chr2L_15510001 RAL-306_75b 147 chr2L 15626366 15626380 chr2L 15626444 15626459 4 78 0.5 0.5 0.5 2.7 93 chr2L 15626366 intergenic not near genes chr2L 15626412 intergenic not near genes chr2L 15626459 intergenic not near genes chr2L_4_15625001 chr2L_15625001 RAL-306_75b 148 chr2L 15773580 15773582 chr2L 15773661 15773663 INE-1 4 81 1.0 0.5 0.8 2.2 83 chr2L 15773580 intergenic CG31826 - chr2L 15773622 intergenic not near genes chr2L 15773663 intergenic not near genes chr2L_4_15770001 chr2L_15770001 RAL-306_75b 149 chr2L 15777817 15777829 chr2L 15778003 15778015 5 186 1.0 2.5 1.8 1.8 198 chr2L 15777817 intergenic not near genes chr2L 15777916 intergenic not near genes chr2L 15778015 intergenic not near genes chr2L_5_15775001 chr2L_15775001 RAL-306_75b 150 chr2L 15790196 15790216 chr2L 15790270 15790292 4 76 1.5 7.0 4.2 0.8 96 chr2L 15790196 intergenic CG18109 + chr2L 15790244 intergenic CG18109 + chr2L 15790292 intergenic CG18109 + chr2L_4_15790001 chr2L_15790001 RAL-306_75b 151 chr2L 15906187 15906209 chr2L 15906271 15906295 4 87 0.5 0.0 0.2 3.3 108 chr2L 15906187 intron beat-Ib - chr2L 15906241 intron beat-Ib - chr2L 15906295 intron beat-Ib - chr2L_4_15905001 chr2L_15905001 RAL-306_75b 152 chr2L 15956021 15956054 chr2L 15957488 15957521 hobo 6 1467 5.5 2.0 3.8 1.2 1500 chr2L 15956021 intron beat-Ib - chr2L 15956771 intron beat-Ib - chr2L 15957521 intron beat-Ib - chr2L_6_15955001 chr2L_15955001 RAL-306_75b 153 chr2L 16062293 16062311 chr2L 16062603 16062623 4 311 0.0 1.0 0.5 2.7 330 chr2L 16062293 intron beat-Ia + chr2L 16062458 intron beat-Ia + chr2L 16062623 intron beat-Ia + chr2L_4_16060001 chr2L_16060001 RAL-306_75b 154 chr2L 16242075 16242083 chr2L 16242165 16242175 4 91 4.5 0.0 2.2 1.2 100 chr2L 16242075 5` UTR CG42818 + chr2L 16242125 exon CG42818 + chr2L 16242175 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-306_75b 155 chr2L 16280260 16280274 chr2L 16281428 16281442 1360 4 1168 1.0 2.0 1.5 1.6 1182 chr2L 16280260 intron crp - chr2L 16280851 intron crp - chr2L 16281442 intron crp - chr2L_4_16280001 chr2L_16280001 RAL-306_75b 156 chr2L 16363945 16363964 chr2L 16364191 16364210 4 246 1.5 0.0 0.8 2.2 265 chr2L 16363945 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364210 intergenic not near genes chr2L_4_16360001 chr2L_16360001 RAL-306_75b 157 chr2L 16444013 16444016 chr2L 16444085 16444093 5 76 2.5 0.0 1.2 2.3 80 chr2L 16444013 intron CG5888 - chr2L 16444053 intron CG5888 - chr2L 16444093 intron CG5888 - chr2L_5_16440001 chr2L_16440001 RAL-306_75b 158 chr2L 16511962 16511991 chr2L 16519076 16519105 HMS-Beagle 4 7114 1.0 1.5 1.2 1.8 7143 chr2L 16511962 intron CG5953 - chr2L 16515534 intron CG5953 - chr2L 16519105 intron CG5953 - chr2L_4_16515001 chr2L_16515001 RAL-306_75b 159 chr2L 16695261 16695291 chr2L 16695345 16695375 8 84 3.0 1.0 2.0 2.7 114 chr2L 16695261 intron grp + chr2L 16695318 intron grp + chr2L 16695375 intron grp + chr2L_8_16695001 chr2L_16695001 RAL-306_75b 160 chr2L 16958102 16958118 chr2L 16962890 16962906 Doc 5 4788 1.0 0.5 0.8 2.8 4804 chr2L 16958102 intergenic not near genes chr2L 16960504 intergenic not near genes chr2L 16962906 intergenic not near genes chr2L_5_16960001 chr2L_16960001 RAL-306_75b 161 chr2L 17158743 17158748 chr2L 17158845 17158850 4 102 5.0 1.5 3.2 1.0 107 chr2L 17158743 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158796 intron,intron CG34106 +,beat-IIIa + chr2L 17158850 intron,intron CG34106 +,beat-IIIa + chr2L_4_17155001 chr2L_17155001 RAL-306_75b 162 chr2L 17167572 17167580 chr2L 17167813 17167821 pogo 7 241 2.0 2.0 2.0 2.3 249 chr2L 17167572 intron,intron CG34106 +,beat-IIIa + chr2L 17167696 intron,intron CG34106 +,beat-IIIa + chr2L 17167821 intron,intron CG34106 +,beat-IIIa + chr2L_7_17165001 chr2L_17165001 RAL-306_75b 163 chr2L 17432017 17432049 chr2L 17432123 17432156 1360 4 107 0.0 0.0 0.0 4.0 139 chr2L 17432017 intron Dif - chr2L 17432086 intron Dif - chr2L 17432156 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-306_75b 164 chr2L 17579890 17579916 chr2L 17579968 17579994 7 78 1.5 2.0 1.8 2.5 104 chr2L 17579890 5` UTR CR45698 + chr2L 17579942 5` UTR CR45698 + chr2L 17579994 5` UTR CR45698 + chr2L_7_17575001 chr2L_17575001 RAL-306_75b 165 chr2L 17607472 17607481 chr2L 17607570 17607579 4 98 2.5 2.5 2.5 1.1 107 chr2L 17607472 intergenic CR44412 - chr2L 17607526 intergenic CR44412 - chr2L 17607579 intergenic CR44412 - chr2L_4_17605001 chr2L_17605001 RAL-306_75b 166 chr2L 17703653 17703686 chr2L 17703739 17703777 6 89 0.5 0.0 0.2 5.0 124 chr2L 17703653 intron CadN - chr2L 17703715 intron CadN - chr2L 17703777 intron CadN - chr2L_6_17700001 chr2L_17700001 RAL-306_75b 167 chr2L 17819928 17819951 chr2L 17825131 17825154 copia 4 5203 2.5 2.5 2.5 1.1 5226 chr2L 17819928 intron CadN2 - chr2L 17822541 intron CadN2 - chr2L 17825154 intron CadN2 - chr2L_4_17820001 chr2L_17820001 RAL-306_75b 168 chr2L 17897243 17897249 chr2L 17897320 17897330 4 80 0.0 2.5 1.2 1.8 87 chr2L 17897243 intergenic not near genes chr2L 17897286 intergenic not near genes chr2L 17897330 intergenic not near genes chr2L_4_17895001 chr2L_17895001 RAL-306_75b 169 chr2L 17943362 17943385 chr2L 17943633 17943656 4 270 1.0 0.0 0.5 2.7 294 chr2L 17943362 intergenic not near genes chr2L 17943509 intergenic not near genes chr2L 17943656 intergenic not near genes chr2L_4_17940001 chr2L_17940001 RAL-306_75b 170 chr2L 17943895 17943920 chr2L 17943998 17944023 5 103 1.5 1.5 1.5 2.0 128 chr2L 17943895 intergenic not near genes chr2L 17943959 intergenic not near genes chr2L 17944023 intergenic not near genes chr2L_5_17940001 chr2L_17940001 RAL-306_75b 171 chr2L 17951945 17951966 chr2L 17953412 17953433 hobo 10 1466 2.0 1.5 1.8 3.6 1488 chr2L 17951945 intergenic CR44398 -,CR44397 - chr2L 17952689 intergenic not near genes chr2L 17953433 intergenic not near genes chr2L_10_17950001 chr2L_17950001 RAL-306_75b 172 chr2L 17989994 17990021 chr2L 17990070 17990097 4 74 2.0 2.5 2.2 1.2 103 chr2L 17989994 intergenic Prosbeta5R2 + chr2L 17990046 intergenic Prosbeta5R2 + chr2L 17990097 intergenic Prosbeta5R2 + chr2L_4_17990001 chr2L_17990001 RAL-306_75b 173 chr2L 18051878 18051895 chr2L 18061025 18061042 roo 6 9147 3.5 1.5 2.5 1.7 9164 chr2L 18051878 intron rdo + chr2L 18056460 intron rdo + chr2L 18061042 intron rdo + chr2L_6_18055001 chr2L_18055001 RAL-306_75b 174 chr2L 18079818 18079846 chr2L 18079904 18079931 5 86 0.0 2.5 1.2 2.3 113 chr2L 18079818 intron Arr1 + chr2L 18079874 intron Arr1 + chr2L 18079931 intron Arr1 + chr2L_5_18075001 chr2L_18075001 RAL-306_75b 175 chr2L 18255488 18255508 chr2L 18255573 18255593 4 85 1.5 0.5 1.0 2.0 105 chr2L 18255488 intron CG42750 - chr2L 18255540 intron CG42750 - chr2L 18255593 intron CG42750 - chr2L_4_18255001 chr2L_18255001 RAL-306_75b 176 chr2L 18538581 18538590 chr2L 18538662 18538671 5 81 0.0 1.0 0.5 3.3 90 chr2L 18538581 intron Pde11 - chr2L 18538626 intron Pde11 - chr2L 18538671 intron Pde11 - chr2L_5_18535001 chr2L_18535001 RAL-306_75b 177 chr2L 18811405 18811434 chr2L 18811487 18811516 4 82 1.0 0.0 0.5 2.7 111 chr2L 18811405 intergenic CG10570 -,CG42502 - chr2L 18811460 intergenic CG10570 -,CG42502 - chr2L 18811516 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-306_75b 178 chr2L 18812556 18812574 chr2L 18812819 18812837 4 262 3.5 0.5 2.0 1.3 281 chr2L 18812556 intergenic CG17325 +,CG42305 + chr2L 18812696 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812837 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_4_18810001 chr2L_18810001 RAL-306_75b 179 chr2L 18847898 18847926 chr2L 18848309 18848337 4 411 1.5 1.5 1.5 1.6 439 chr2L 18847898 intron CG17321 + chr2L 18848118 intron CG17321 + chr2L 18848337 intron CG17321 + chr2L_4_18845001 chr2L_18845001 RAL-306_75b 180 chr2L 18883853 18883885 chr2L 18883935 18883967 9 82 1.5 2.5 2.0 3.0 114 chr2L 18883853 intergenic not near genes chr2L 18883910 intergenic not near genes chr2L 18883967 intergenic not near genes chr2L_9_18880001 chr2L_18880001 RAL-306_75b 181 chr2L 18898419 18898428 chr2L 18898501 18898510 5 82 0.5 0.5 0.5 3.3 91 chr2L 18898419 intergenic not near genes chr2L 18898464 intergenic not near genes chr2L 18898510 intergenic not near genes chr2L_5_18895001 chr2L_18895001 RAL-306_75b 182 chr2L 19077300 19077323 chr2L 19078741 19078764 5 1441 0.5 1.0 0.8 2.8 1464 chr2L 19077300 3` UTR CG10700 - chr2L 19078032 exon CG10700 - chr2L 19078764 exon CG10700 - chr2L_5_19075001 chr2L_19075001 RAL-306_75b 183 chr2L 19106389 19106403 chr2L 19106468 19106483 4 79 1.5 2.0 1.8 1.4 94 chr2L 19106389 intron Lim3 - chr2L 19106436 intron Lim3 - chr2L 19106483 intron Lim3 - chr2L_4_19105001 chr2L_19105001 RAL-306_75b 184 chr2L 19147370 19147382 chr2L 19154405 19154416 297 4 7035 0.5 1.5 1.0 2.0 7046 chr2L 19147370 intron brat + chr2L 19150893 intron brat + chr2L 19154416 intron brat + chr2L_4_19150001 chr2L_19150001 RAL-306_75b 185 chr2L 19246827 19246847 chr2L 19246907 19246927 6 80 2.0 0.5 1.2 2.7 100 chr2L 19246827 intergenic not near genes chr2L 19246877 intergenic not near genes chr2L 19246927 intergenic not near genes chr2L_6_19245001 chr2L_19245001 RAL-306_75b 186 chr2L 19270925 19270927 chr2L 19271014 19271017 4 89 0.0 4.0 2.0 1.3 92 chr2L 19270925 intron CR44190 - chr2L 19270971 intron CR44190 - chr2L 19271017 intron CR44190 - chr2L_4_19270001 chr2L_19270001 RAL-306_75b 187 chr2L 19364090 19364102 chr2L 19364170 19364182 4 80 0.5 1.5 1.0 2.0 92 chr2L 19364090 intergenic CG13086 + chr2L 19364136 intergenic CG13086 + chr2L 19364182 intergenic CG13086 + chr2L_4_19360001 chr2L_19360001 RAL-306_75b 188 chr2L 19378339 19378356 chr2L 19378422 19378439 4 83 0.5 1.5 1.0 2.0 100 chr2L 19378339 intergenic not near genes chr2L 19378389 intergenic not near genes chr2L 19378439 intergenic not near genes chr2L_4_19375001 chr2L_19375001 RAL-306_75b 189 chr2L 19424966 19424982 chr2L 19425141 19425157 5 175 1.0 3.0 2.0 1.7 191 chr2L 19424966 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L 19425062 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L 19425157 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L_5_19425001 chr2L_19425001 RAL-306_75b 190 chr2L 19441069 19441083 chr2L 19441146 19441160 4 77 0.0 5.5 2.8 1.1 91 chr2L 19441069 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441160 5` UTR CG10237 - chr2L_4_19440001 chr2L_19440001 RAL-306_75b 191 chr2L 19562550 19562559 chr2L 19562629 19562639 4 79 0.0 1.0 0.5 2.7 89 chr2L 19562550 intron Tep5 + chr2L 19562594 intron Tep5 + chr2L 19562639 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-306_75b 192 chr2L 20372228 20372243 chr2L 20372469 20372484 pogo 4 241 0.0 1.0 0.5 2.7 256 chr2L 20372228 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372484 exon Ugt37a1 - chr2L_4_20370001 chr2L_20370001 RAL-306_75b 193 chr2L 20498024 20498055 chr2L 20498120 20498151 4 96 1.5 3.0 2.2 1.2 127 chr2L 20498024 intergenic not near genes chr2L 20498088 intergenic not near genes chr2L 20498151 intergenic not near genes chr2L_4_20495001 chr2L_20495001 RAL-306_75b 194 chr2L 20553186 20553220 chr2L 20553262 20553296 9 76 2.0 0.0 1.0 4.5 110 chr2L 20553186 intergenic not near genes chr2L 20553241 intergenic not near genes chr2L 20553296 intergenic not near genes chr2L_9_20550001 chr2L_20550001 RAL-306_75b 195 chr2L 20576216 20576228 chr2L 20583685 20583697 blood 7 7469 2.5 1.0 1.8 2.5 7481 chr2L 20576216 intergenic CR45347 + chr2L 20579956 intergenic not near genes chr2L 20583697 3` UTR CR44909 - chr2L_7_20575001 chr2L_20575001 RAL-306_75b 196 chr2L 20601791 20601796 chr2L 20601869 20601874 4 78 2.0 0.5 1.2 1.8 83 chr2L 20601791 intron CR44909 - chr2L 20601832 intron CR44909 - chr2L 20601874 intron CR44909 - chr2L_4_20600001 chr2L_20600001 RAL-306_75b 197 chr2L 20826518 20826524 chr2L 20826598 20826603 6 80 5.5 0.5 3.0 1.5 85 chr2L 20826518 intron CG9331 + chr2L 20826560 intron CG9331 + chr2L 20826603 intron CG9331 + chr2L_6_20825001 chr2L_20825001 RAL-306_75b 198 chr2L 20846763 20846783 chr2L 20846847 20846866 6 84 3.0 0.0 1.5 2.4 103 chr2L 20846763 intron CG31676 + chr2L 20846814 intron CG31676 + chr2L 20846866 intron CG31676 + chr2L_6_20845001 chr2L_20845001 RAL-306_75b 199 chr2L 20911030 20911058 chr2L 20911105 20911134 9 75 2.0 0.0 1.0 4.5 104 chr2L 20911030 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911134 intron,intron CG43739 -,sky - chr2L_9_20910001 chr2L_20910001 RAL-306_75b 200 chr2L 20976653 20976681 chr2L 20981468 20981496 X-element 5 4815 1.0 1.0 1.0 2.5 4843 chr2L 20976653 intron CG42238 - chr2L 20979074 intron CG42238 - chr2L 20981496 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-306_75b 201 chr2L 20991042 20991066 chr2L 20991120 20991144 7 78 0.5 0.0 0.2 5.8 102 chr2L 20991042 intron CG42238 - chr2L 20991093 intron CG42238 - chr2L 20991144 intron CG42238 - chr2L_7_20990001 chr2L_20990001 RAL-306_75b 202 chr2L 21020286 21020311 chr2L 21023963 21023988 NOF 7 3677 2.5 2.0 2.2 2.2 3702 chr2L 21020286 intron CG42238 - chr2L 21022137 intron CG42238 - chr2L 21023988 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-306_75b 203 chr2L 21041137 21041165 chr2L 21049397 21049425 Tirant 4 8260 2.5 2.0 2.2 1.2 8288 chr2L 21041137 intron CG42238 - chr2L 21045281 intron CG42238 - chr2L 21049425 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-306_75b 204 chr2L 21086422 21086453 chr2L 21086537 21086567 7 115 0.0 2.0 1.0 3.5 145 chr2L 21086422 5` UTR CG33509 - chr2L 21086494 5` UTR CG33509 - chr2L 21086567 intergenic CG33509 -,ppk13 - chr2L_7_21085001 chr2L_21085001 RAL-306_75b 205 chr2L 21088923 21088945 chr2L 21089005 21089028 6 81 4.0 0.5 2.2 1.9 105 chr2L 21088923 intergenic ppk13 -,CG9259 + chr2L 21088976 intergenic ppk13 -,CG9259 + chr2L 21089028 intergenic ppk13 -,CG9259 + chr2L_6_21085001 chr2L_21085001 RAL-306_75b 206 chr2L 21754663 21754690 chr2L 21754744 21754771 6 80 0.0 0.0 0.0 6.0 108 chr2L 21754663 intron step - chr2L 21754717 intron step - chr2L 21754771 intron step - chr2L_6_21750001 chr2L_21750001 RAL-306_75b 207 chr2L 21771990 21772012 chr2L 21772069 21772091 5 79 1.0 0.5 0.8 2.8 101 chr2L 21771990 intron CG31612 - chr2L 21772040 intron CG31612 - chr2L 21772091 intron CG31612 - chr2L_5_21770001 chr2L_21770001 RAL-306_75b 208 chr2L 21772734 21772739 chr2L 21773333 21773339 4 600 2.5 1.5 2.0 1.3 605 chr2L 21772734 intron CG31612 - chr2L 21773036 exon CG31612 - chr2L 21773339 exon CG31612 - chr2L_4_21770001 chr2L_21770001 RAL-306_75b 209 chr2L 21819343 21819359 chr2L 21819430 21819447 5 88 1.5 3.5 2.5 1.4 104 chr2L 21819343 intergenic CR44786 + chr2L 21819395 intergenic CR44786 + chr2L 21819447 intergenic CR44786 + chr2L_5_21815001 chr2L_21815001 RAL-306_75b 210 chr2L 21824125 21824138 chr2L 21824212 21824224 7 87 0.0 1.0 0.5 4.7 99 chr2L 21824125 intergenic not near genes chr2L 21824174 intergenic not near genes chr2L 21824224 intergenic not near genes chr2L_7_21820001 chr2L_21820001 RAL-306_75b 211 chr2L 22215923 22215940 chr2L 22216009 22216026 4 86 1.5 1.5 1.5 1.6 103 chr2L 22215923 intergenic not near genes chr2L 22215974 intergenic not near genes chr2L 22216026 intergenic not near genes chr2L_4_22215001 chr2L_22215001 RAL-306_75b 212 chr2L 22258613 22258640 chr2L 22260734 22260764 G6 7 2123 1.0 1.5 1.2 3.2 2151 chr2L 22258613 intergenic Tif-IA + chr2L 22259688 intergenic not near genes chr2L 22260764 intergenic not near genes chr2L_7_22255001 chr2L_22255001 RAL-306_75b 213 chr2L 22294368 22294385 chr2L 22294456 22294473 4 88 1.0 0.5 0.8 2.2 105 chr2L 22294368 intergenic not near genes chr2L 22294420 intergenic not near genes chr2L 22294473 intergenic not near genes chr2L_4_22290001 chr2L_22290001 RAL-306_75b 214 chr2L 22581975 22581997 chr2L 22583764 22583785 S-element 5 1789 4.0 2.5 3.2 1.2 1810 chr2L 22581975 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583785 intron CG17494 + chr2L_5_22580001 chr2L_22580001 RAL-306_75b 215 chr2R 2499004 2499013 chr2R 2508151 2508159 roo 6 9146 1.5 5.0 3.2 1.4 9155 chr2R 2499004 intron MFS17 - chr2R 2503582 intron MFS17 - chr2R 2508159 intron MFS17 - chr2R_6_2500001 chr2R_2500001 RAL-306_75b 216 chr2R 4265301 4265315 chr2R 4265384 4265394 6 82 3.5 4.5 4.0 1.2 93 chr2R 4265301 intergenic not near genes chr2R 4265348 intergenic not near genes chr2R 4265394 intergenic not near genes chr2R_6_4265001 chr2R_4265001 RAL-306_75b 217 chr2R 4580191 4580212 chr2R 4580818 4580839 5 627 0.5 2.5 1.5 2.0 648 chr2R 4580191 intergenic not near genes chr2R 4580515 intergenic not near genes chr2R 4580839 intergenic not near genes chr2R_5_4580001 chr2R_4580001 RAL-306_75b 218 chr2R 4634165 4634180 chr2R 4634244 4634259 7 79 2.0 2.5 2.2 2.2 94 chr2R 4634165 intergenic not near genes chr2R 4634212 intergenic not near genes chr2R 4634259 intergenic not near genes chr2R_7_4630001 chr2R_4630001 RAL-306_75b 219 chr2R 4656795 4656805 chr2R 4657005 4657011 4 209 6.0 5.0 5.5 0.6 216 chr2R 4656795 intergenic not near genes chr2R 4656903 intergenic not near genes chr2R 4657011 intergenic not near genes chr2R_4_4655001 chr2R_4655001 RAL-306_75b 220 chr2R 5075225 5075246 chr2R 5075352 5075373 7 128 1.0 0.0 0.5 4.7 148 chr2R 5075225 intergenic not near genes chr2R 5075299 intergenic not near genes chr2R 5075373 intergenic not near genes chr2R_7_5075001 chr2R_5075001 RAL-306_75b 221 chr2R 5417998 5418018 chr2R 5420630 5420650 Burdock 5 2632 1.5 2.0 1.8 1.8 2652 chr2R 5417998 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420650 intron laccase2 + chr2R_5_5415001 chr2R_5415001 RAL-306_75b 222 chr2R 5503557 5503576 chr2R 5503637 5503656 4 80 1.0 0.0 0.5 2.7 99 chr2R 5503557 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503606 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503656 intron,intron CG30438 +,TpnC4 - chr2R_4_5500001 chr2R_5500001 RAL-306_75b 223 chr2R 5509517 5509542 chr2R 5509613 5509638 5 96 1.0 0.0 0.5 3.3 121 chr2R 5509517 intron CG30438 + chr2R 5509578 intron CG30438 + chr2R 5509638 intron CG30438 + chr2R_5_5505001 chr2R_5505001 RAL-306_75b 224 chr2R 5742836 5742854 chr2R 5742915 5742933 7 79 2.5 2.0 2.2 2.2 97 chr2R 5742836 intergenic not near genes chr2R 5742884 intergenic not near genes chr2R 5742933 intergenic not near genes chr2R_7_5740001 chr2R_5740001 RAL-306_75b 225 chr2R 5794235 5794260 chr2R 5794363 5794386 6 127 1.0 3.5 2.2 1.9 151 chr2R 5794235 intergenic not near genes chr2R 5794310 intergenic not near genes chr2R 5794386 intergenic not near genes chr2R_6_5790001 chr2R_5790001 RAL-306_75b 226 chr2R 5861294 5861310 chr2R 5861415 5861431 6 120 1.0 0.5 0.8 3.3 137 chr2R 5861294 intergenic dpr12 + chr2R 5861362 intergenic not near genes chr2R 5861431 intergenic not near genes chr2R_6_5860001 chr2R_5860001 RAL-306_75b 227 chr2R 5878942 5878956 chr2R 5879021 5879036 5 80 1.5 3.0 2.2 1.6 94 chr2R 5878942 intergenic CG44438 - chr2R 5878989 intergenic CG44438 - chr2R 5879036 intergenic CG44438 - chr2R_5_5875001 chr2R_5875001 RAL-306_75b 228 chr2R 5947068 5947075 chr2R 5947189 5947196 4 121 1.5 0.5 1.0 2.0 128 chr2R 5947068 intergenic not near genes chr2R 5947132 intergenic not near genes chr2R 5947196 intergenic not near genes chr2R_4_5945001 chr2R_5945001 RAL-306_75b 229 chr2R 6016665 6016700 chr2R 6016972 6017004 9 307 1.5 1.0 1.2 4.1 339 chr2R 6016665 intergenic not near genes chr2R 6016834 intergenic not near genes chr2R 6017004 intergenic not near genes chr2R_9_6015001 chr2R_6015001 RAL-306_75b 230 chr2R 6088378 6088387 chr2R 6088471 6088480 4 92 1.5 3.5 2.5 1.1 102 chr2R 6088378 intergenic not near genes chr2R 6088429 intergenic not near genes chr2R 6088480 intergenic not near genes chr2R_4_6085001 chr2R_6085001 RAL-306_75b 231 chr2R 6096715 6096732 chr2R 6101913 6101930 BS 5 5197 4.0 1.0 2.5 1.4 5215 chr2R 6096715 intron EcR - chr2R 6099322 intron EcR - chr2R 6101930 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-306_75b 232 chr2R 6178121 6178142 chr2R 6178247 6178268 6 126 2.5 0.5 1.5 2.4 147 chr2R 6178121 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178268 intergenic not near genes chr2R_6_6175001 chr2R_6175001 RAL-306_75b 233 chr2R 6546729 6546735 chr2R 6546830 6546836 5 100 2.0 3.5 2.8 1.3 107 chr2R 6546729 intron jing + chr2R 6546782 intron jing + chr2R 6546836 intron jing + chr2R_5_6545001 chr2R_6545001 RAL-306_75b 234 chr2R 6562544 6562570 chr2R 6562633 6562658 6 88 1.5 0.5 1.0 3.0 114 chr2R 6562544 intron jing + chr2R 6562601 intron jing + chr2R 6562658 intron jing + chr2R_6_6560001 chr2R_6560001 RAL-306_75b 235 chr2R 6760475 6760497 chr2R 6760980 6761001 6 505 0.0 0.5 0.2 5.0 526 chr2R 6760475 3` UTR Epac - chr2R 6760738 3` UTR Epac - chr2R 6761001 3` UTR Epac - chr2R_6_6760001 chr2R_6760001 RAL-306_75b 236 chr2R 6876224 6876248 chr2R 6876306 6876330 4 82 0.5 5.0 2.8 1.1 106 chr2R 6876224 intron,intron CR44169 +,Spn42Da - chr2R 6876277 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876330 5` UTR,intron CR44169 +,Spn42Da - chr2R_4_6875001 chr2R_6875001 RAL-306_75b 237 chr2R 6936235 6936254 chr2R 6936317 6936336 5 82 2.5 0.5 1.5 2.0 101 chr2R 6936235 intron mim - chr2R 6936286 intron mim - chr2R 6936336 intron mim - chr2R_5_6935001 chr2R_6935001 RAL-306_75b 238 chr2R 6952176 6952179 chr2R 6959756 6959759 opus 5 7580 2.5 1.5 2.0 1.7 7583 chr2R 6952176 intron,intron mim -,CheB42c - chr2R 6955968 intron,intron mim -,CheB42c - chr2R 6959759 intron,intron mim -,CheB42c - chr2R_5_6955001 chr2R_6955001 RAL-306_75b 239 chr2R 7029856 7029876 chr2R 7030163 7030184 8 307 2.5 2.0 2.2 2.5 328 chr2R 7029856 intron Tsp42Eg + chr2R 7030020 intron Tsp42Eg + chr2R 7030184 intron Tsp42Eg + chr2R_8_7030001 chr2R_7030001 RAL-306_75b 240 chr2R 7139946 7139952 chr2R 7141438 7141444 hopper2 4 1491 0.0 4.0 2.0 1.3 1498 chr2R 7139946 intergenic not near genes chr2R 7140695 intergenic not near genes chr2R 7141444 intergenic not near genes chr2R_4_7140001 chr2R_7140001 RAL-306_75b 241 chr2R 7235820 7235834 chr2R 7240911 7240925 jockey 4 5092 1.0 0.0 0.5 2.7 5105 chr2R 7235820 intergenic not near genes chr2R 7238372 intergenic not near genes chr2R 7240925 intergenic not near genes chr2R_4_7235001 chr2R_7235001 RAL-306_75b 242 chr2R 7417911 7418158 chr2R 7417997 7418231 4 81 3.5 4.0 3.8 0.8 320 chr2R 7417911 intergenic not near genes chr2R 7418071 intergenic not near genes chr2R 7418231 intergenic not near genes chr2R_4_7415001 chr2R_7415001 RAL-306_75b 243 chr2R 7434895 7434913 chr2R 7439196 7439214 Juan 7 4301 0.0 3.5 1.8 2.5 4319 chr2R 7434895 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439214 intergenic not near genes chr2R_7_7435001 chr2R_7435001 RAL-306_75b 244 chr2R 7459277 7459304 chr2R 7459365 7459392 8 88 1.5 0.0 0.8 4.4 115 chr2R 7459277 intergenic Inos -,CG11141 - chr2R 7459334 intergenic CG11141 -,Inos - chr2R 7459392 intergenic CG11141 - chr2R_8_7455001 chr2R_7455001 RAL-306_75b 245 chr2R 7869187 7869208 chr2R 7873973 7873994 Doc 5 4786 3.0 0.5 1.8 1.8 4807 chr2R 7869187 intron Dgk - chr2R 7871590 intron Dgk - chr2R 7873994 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-306_75b 246 chr2R 7915714 7915736 chr2R 7915806 7915828 5 92 0.5 0.0 0.2 4.2 114 chr2R 7915714 intron CG12159 - chr2R 7915771 intron CG12159 - chr2R 7915828 intron CG12159 - chr2R_5_7915001 chr2R_7915001 RAL-306_75b 247 chr2R 8015675 8015684 chr2R 8017697 8017706 5 2023 0.5 4.5 2.5 1.4 2031 chr2R 8015675 intergenic mir-4981 + chr2R 8016690 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-306_75b 248 chr2R 8105932 8105957 chr2R 8106023 8106048 6 91 2.0 2.0 2.0 2.0 116 chr2R 8105932 5` UTR Cul4 - chr2R 8105990 intron Cul4 - chr2R 8106048 5` UTR Cul4 - chr2R_6_8105001 chr2R_8105001 RAL-306_75b 249 chr2R 8277661 8277668 chr2R 8277755 8277763 6 95 2.5 3.0 2.8 1.6 102 chr2R 8277661 5` UTR CR44280 + chr2R 8277712 5` UTR CR44280 + chr2R 8277763 5` UTR CR44280 + chr2R_6_8275001 chr2R_8275001 RAL-306_75b 250 chr2R 8330868 8330888 chr2R 8331354 8331374 roo 4 486 0.0 0.5 0.2 3.3 506 chr2R 8330868 intron pdm3 + chr2R 8331121 intron pdm3 + chr2R 8331374 intron pdm3 + chr2R_4_8330001 chr2R_8330001 RAL-306_75b 251 chr2R 8368186 8368210 chr2R 8368266 8368290 6 80 0.5 1.0 0.8 3.3 104 chr2R 8368186 intron pdm3 + chr2R 8368238 intron pdm3 + chr2R 8368290 intron pdm3 + chr2R_6_8365001 chr2R_8365001 RAL-306_75b 252 chr2R 8488925 8488942 chr2R 8489010 8489025 6 84 1.0 0.5 0.8 3.3 100 chr2R 8488925 intron mtt - chr2R 8488975 intron mtt - chr2R 8489025 intron mtt - chr2R_6_8485001 chr2R_8485001 RAL-306_75b 253 chr2R 8489732 8489754 chr2R 8489811 8489833 11 79 1.5 0.5 1.0 5.5 101 chr2R 8489732 intron mtt - chr2R 8489782 intron mtt - chr2R 8489833 intron mtt - chr2R_11_8485001 chr2R_8485001 RAL-306_75b 254 chr2R 8612579 8612607 chr2R 8612656 8612683 5 77 1.0 0.5 0.8 2.8 104 chr2R 8612579 intron CG8642 - chr2R 8612631 intron CG8642 - chr2R 8612683 intron CG8642 - chr2R_5_8610001 chr2R_8610001 RAL-306_75b 255 chr2R 8827762 8827792 chr2R 8827838 8827866 10 76 2.0 3.0 2.5 2.9 104 chr2R 8827762 intron sns + chr2R 8827814 intron sns + chr2R 8827866 intron sns + chr2R_10_8825001 chr2R_8825001 RAL-306_75b 256 chr2R 8976205 8976219 chr2R 8976294 8976308 8 89 0.5 0.0 0.2 6.7 103 chr2R 8976205 intron CG8213 - chr2R 8976256 intron CG8213 - chr2R 8976308 intron CG8213 - chr2R_8_8975001 chr2R_8975001 RAL-306_75b 257 chr2R 9388659 9388660 chr2R 9388744 9388747 4 86 4.5 2.5 3.5 0.9 88 chr2R 9388659 5` UTR CG13954 - chr2R 9388703 5` UTR CG13954 - chr2R 9388747 5` UTR CG13954 - chr2R_4_9385001 chr2R_9385001 RAL-306_75b 258 chr2R 9462893 9462911 chr2R 9462974 9462992 6 81 1.5 2.5 2.0 2.0 99 chr2R 9462893 intron Camta + chr2R 9462942 intron Camta + chr2R 9462992 intron Camta + chr2R_6_9460001 chr2R_9460001 RAL-306_75b 259 chr2R 9480095 9480110 chr2R 9490625 9490641 roo 6 10531 0.0 2.5 1.2 2.7 10546 chr2R 9480095 intergenic not near genes chr2R 9485368 intergenic not near genes chr2R 9490641 intergenic not near genes chr2R_6_9485001 chr2R_9485001 RAL-306_75b 260 chr2R 9869949 9869972 chr2R 9870053 9870077 7 105 0.5 1.0 0.8 3.9 128 chr2R 9869949 intron cbx - chr2R 9870013 intron cbx - chr2R 9870077 intron cbx - chr2R_7_9870001 chr2R_9870001 RAL-306_75b 261 chr2R 9871038 9871066 chr2R 9871524 9871552 roo 8 485 4.0 1.0 2.5 2.3 514 chr2R 9871038 intron cbx - chr2R 9871295 intron cbx - chr2R 9871552 intron,5` UTR cbx -,CG18446 + chr2R_8_9870001 chr2R_9870001 RAL-306_75b 262 chr2R 10005853 10005875 chr2R 10007018 10007040 1360 7 1165 0.5 0.0 0.2 5.8 1187 chr2R 10005853 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007040 intron Pka-R2 - chr2R_7_10005001 chr2R_10005001 RAL-306_75b 263 chr2R 10053530 10053539 chr2R 10053633 10053639 4 102 1.5 1.5 1.5 1.6 109 chr2R 10053530 intron magu + chr2R 10053584 intron magu + chr2R 10053639 intron magu + chr2R_4_10050001 chr2R_10050001 RAL-306_75b 264 chr2R 10132211 10132222 chr2R 10132289 10132302 6 80 0.5 0.5 0.5 4.0 91 chr2R 10132211 intron gem + chr2R 10132256 intron gem + chr2R 10132302 intron gem + chr2R_6_10130001 chr2R_10130001 RAL-306_75b 265 chr2R 10133520 10133529 chr2R 10133598 10133607 4 78 1.0 0.5 0.8 2.2 87 chr2R 10133520 intron gem + chr2R 10133564 intron gem + chr2R 10133607 intron gem + chr2R_4_10130001 chr2R_10130001 RAL-306_75b 266 chr2R 10171115 10171140 chr2R 10171196 10171224 6 83 1.0 2.5 1.8 2.1 109 chr2R 10171115 intron KCNQ - chr2R 10171170 intron KCNQ - chr2R 10171224 intron KCNQ - chr2R_6_10170001 chr2R_10170001 RAL-306_75b 267 chr2R 10176881 10176907 chr2R 10186051 10186077 roo 4 9170 1.5 1.0 1.2 1.8 9196 chr2R 10176881 intron KCNQ - chr2R 10181479 intron KCNQ - chr2R 10186077 intron KCNQ - chr2R_4_10180001 chr2R_10180001 RAL-306_75b 268 chr2R 10189204 10189230 chr2R 10189282 10189306 8 77 4.0 3.5 3.8 1.7 102 chr2R 10189204 intron KCNQ - chr2R 10189255 intron KCNQ - chr2R 10189306 intron KCNQ - chr2R_8_10185001 chr2R_10185001 RAL-306_75b 269 chr2R 10190448 10190468 chr2R 10190531 10190551 6 83 1.5 6.0 3.8 1.2 103 chr2R 10190448 intron KCNQ - chr2R 10190500 intron KCNQ - chr2R 10190551 intron KCNQ - chr2R_6_10190001 chr2R_10190001 RAL-306_75b 270 chr2R 10300644 10300664 chr2R 10300740 10300760 4 96 0.5 0.0 0.2 3.3 116 chr2R 10300644 intron CAP + chr2R 10300702 intron CAP + chr2R 10300760 intron CAP + chr2R_4_10300001 chr2R_10300001 RAL-306_75b 271 chr2R 10313317 10313340 chr2R 10313405 10313427 7 88 1.0 1.5 1.2 3.2 110 chr2R 10313317 intergenic not near genes chr2R 10313372 intergenic not near genes chr2R 10313427 intergenic Ndg + chr2R_7_10310001 chr2R_10310001 RAL-306_75b 272 chr2R 10585573 10585584 chr2R 10594156 10594167 Tirant 4 8583 2.0 2.5 2.2 1.2 8594 chr2R 10585573 intron psq + chr2R 10589870 intron psq + chr2R 10594167 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-306_75b 273 chr2R 10778363 10778375 chr2R 10778445 10778455 6 81 0.5 0.0 0.2 5.0 92 chr2R 10778363 intron CG33144 - chr2R 10778409 intron CG33144 - chr2R 10778455 intron CG33144 - chr2R_6_10775001 chr2R_10775001 RAL-306_75b 274 chr2R 10790142 10790168 chr2R 10790230 10790256 5 88 3.0 1.5 2.2 1.6 114 chr2R 10790142 intron CG33144 - chr2R 10790199 intron CG33144 - chr2R 10790256 intron CG33144 - chr2R_5_10790001 chr2R_10790001 RAL-306_75b 275 chr2R 11019892 11019908 chr2R 11024958 11024974 jockey 11 5066 1.0 0.0 0.5 7.3 5082 chr2R 11019892 intron luna - chr2R 11022433 intron luna - chr2R 11024974 intron luna - chr2R_11_11020001 chr2R_11020001 RAL-306_75b 276 chr2R 11129404 11129439 chr2R 11132058 11132093 13 2654 12.5 8.0 10.2 1.2 2689 chr2R 11129404 intergenic not near genes chr2R 11130748 intergenic not near genes chr2R 11132093 intergenic not near genes chr2R_13_11130001 chr2R_11130001 RAL-306_75b 277 chr2R 11207822 11207847 chr2R 11208013 11208040 BS 6 192 2.0 1.5 1.8 2.1 218 chr2R 11207822 intron shn + chr2R 11207931 intron shn + chr2R 11208040 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-306_75b 278 chr2R 11415521 11415550 chr2R 11418668 11418699 opus 7 3148 4.5 1.5 3.0 1.8 3178 chr2R 11415521 intron Drip - chr2R 11417110 intron Drip - chr2R 11418699 intron Drip - chr2R_7_11415001 chr2R_11415001 RAL-306_75b 279 chr2R 11445581 11445588 chr2R 11445657 11445667 5 78 4.5 2.5 3.5 1.1 86 chr2R 11445581 intron qvr + chr2R 11445624 intron qvr + chr2R 11445667 intron qvr + chr2R_5_11445001 chr2R_11445001 RAL-306_75b 280 chr2R 11485123 11485130 chr2R 11485205 11485212 6 81 1.5 2.5 2.0 2.0 89 chr2R 11485123 intron inv + chr2R 11485168 intron inv + chr2R 11485212 intron inv + chr2R_6_11485001 chr2R_11485001 RAL-306_75b 281 chr2R 12115742 12115864 chr2R 12115832 12115940 8 86 0.0 0.0 0.0 8.0 198 chr2R 12115742 intron jeb - chr2R 12115841 intron jeb - chr2R 12115940 intron jeb - chr2R_8_12115001 chr2R_12115001 RAL-306_75b 282 chr2R 12186002 12186032 chr2R 12186097 12186127 13 95 2.0 3.0 2.5 3.7 125 chr2R 12186002 intron Cyp6g1 + chr2R 12186064 intron Cyp6g1 + chr2R 12186127 intron Cyp6g1 + chr2R_13_12185001 chr2R_12185001 RAL-306_75b 283 chr2R 12187478 12187505 chr2R 12190097 12190121 13 2617 19.0 19.5 19.2 0.6 2643 chr2R 12187478 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190121 exon Cyp6g2 - chr2R_13_12185001 chr2R_12185001 RAL-306_75b 284 chr2R 12255721 12255750 chr2R 12255840 12255869 6 119 0.5 2.5 1.5 2.4 148 chr2R 12255721 intergenic CG13168 + chr2R 12255795 intergenic CG13168 + chr2R 12255869 intergenic CG13168 + chr2R_6_12255001 chr2R_12255001 RAL-306_75b 285 chr2R 12363389 12363417 chr2R 12363820 12363849 9 432 0.0 0.0 0.0 9.0 460 chr2R 12363389 intergenic CG30043 + chr2R 12363619 intergenic CG30043 + chr2R 12363849 intergenic not near genes chr2R_9_12360001 chr2R_12360001 RAL-306_75b 286 chr2R 12565583 12565591 chr2R 12565966 12565974 4 383 0.0 2.0 1.0 2.0 391 chr2R 12565583 intergenic not near genes chr2R 12565778 intergenic Cyp301a1 + chr2R 12565974 intergenic Cyp301a1 + chr2R_4_12565001 chr2R_12565001 RAL-306_75b 287 chr2R 12707520 12707544 chr2R 12715886 12715910 roo 4 8366 0.0 0.0 0.0 4.0 8390 chr2R 12707520 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715910 intron CG42663 + chr2R_4_12710001 chr2R_12710001 RAL-306_75b 288 chr2R 12836388 12836410 chr2R 12836475 12836497 8 87 1.5 1.0 1.2 3.6 109 chr2R 12836388 intergenic not near genes chr2R 12836442 intergenic not near genes chr2R 12836497 intergenic not near genes chr2R_8_12835001 chr2R_12835001 RAL-306_75b 289 chr2R 13034675 13034685 chr2R 13034783 13034794 6 109 0.0 3.0 1.5 2.4 119 chr2R 13034675 intergenic not near genes chr2R 13034734 intergenic not near genes chr2R 13034794 intergenic not near genes chr2R_6_13030001 chr2R_13030001 RAL-306_75b 290 chr2R 13136855 13136863 chr2R 13141650 13141659 Doc 4 4796 3.0 2.5 2.8 1.1 4804 chr2R 13136855 exon Cap-G + chr2R 13139257 intron Cap-G + chr2R 13141659 intron Cap-G + chr2R_4_13135001 chr2R_13135001 RAL-306_75b 291 chr2R 13167428 13167449 chr2R 13167522 13167543 4 94 3.0 0.0 1.5 1.6 115 chr2R 13167428 intron GLaz - chr2R 13167486 intron GLaz - chr2R 13167543 intron GLaz - chr2R_4_13165001 chr2R_13165001 RAL-306_75b 292 chr2R 13261163 13261179 chr2R 13261258 13261274 4 95 0.0 2.5 1.2 1.8 111 chr2R 13261163 intron CG42319 + chr2R 13261218 intron CG42319 + chr2R 13261274 intron CG42319 + chr2R_4_13260001 chr2R_13260001 RAL-306_75b 293 chr2R 13403930 13403936 chr2R 13404014 13404021 4 85 0.0 2.5 1.2 1.8 91 chr2R 13403930 intergenic not near genes chr2R 13403976 intergenic not near genes chr2R 13404021 intergenic not near genes chr2R_4_13400001 chr2R_13400001 RAL-306_75b 294 chr2R 13404882 13404911 chr2R 13404967 13404996 6 85 0.0 4.0 2.0 2.0 114 chr2R 13404882 intergenic not near genes chr2R 13404939 intergenic not near genes chr2R 13404996 intergenic not near genes chr2R_6_13400001 chr2R_13400001 RAL-306_75b 295 chr2R 13653487 13653508 chr2R 13653748 13653769 5 260 1.5 1.0 1.2 2.3 282 chr2R 13653487 intron fas + chr2R 13653628 intron fas + chr2R 13653769 intron fas + chr2R_5_13650001 chr2R_13650001 RAL-306_75b 296 chr2R 13704266 13704285 chr2R 13704356 13704374 4 90 0.5 0.5 0.5 2.7 108 chr2R 13704266 intron fas + chr2R 13704320 intron fas + chr2R 13704374 intron fas + chr2R_4_13700001 chr2R_13700001 RAL-306_75b 297 chr2R 13738909 13738926 chr2R 13738998 13739017 6 91 0.0 0.0 0.0 6.0 108 chr2R 13738909 intron fas + chr2R 13738963 intron fas + chr2R 13739017 intron fas + chr2R_6_13735001 chr2R_13735001 RAL-306_75b 298 chr2R 13905601 13905632 chr2R 13907583 13907614 Rt1a 5 1982 2.0 2.0 2.0 1.7 2013 chr2R 13905601 intron shot - chr2R 13906608 intron shot - chr2R 13907614 intron shot - chr2R_5_13905001 chr2R_13905001 RAL-306_75b 299 chr2R 13925868 13925891 chr2R 13926022 13926045 7 154 1.0 2.0 1.5 2.8 177 chr2R 13925868 intron shot - chr2R 13925956 intron shot - chr2R 13926045 intron shot - chr2R_7_13925001 chr2R_13925001 RAL-306_75b 300 chr2R 14018155 14018165 chr2R 14018239 14018249 4 84 3.0 2.5 2.8 1.1 94 chr2R 14018155 intron mam + chr2R 14018202 intron mam + chr2R 14018249 intron mam + chr2R_4_14015001 chr2R_14015001 RAL-306_75b 301 chr2R 14036511 14036523 chr2R 14036733 14036745 5 222 1.0 0.5 0.8 2.8 234 chr2R 14036511 intron mam + chr2R 14036628 intron mam + chr2R 14036745 intron mam + chr2R_5_14035001 chr2R_14035001 RAL-306_75b 302 chr2R 14037270 14037290 chr2R 14037353 14037373 8 83 0.0 0.5 0.2 6.7 103 chr2R 14037270 intron mam + chr2R 14037322 intron mam + chr2R 14037373 intron mam + chr2R_8_14035001 chr2R_14035001 RAL-306_75b 303 chr2R 14342221 14342243 chr2R 14342296 14342319 6 76 1.5 1.0 1.2 2.7 98 chr2R 14342221 intron Shroom + chr2R 14342270 intron Shroom + chr2R 14342319 intron Shroom + chr2R_6_14340001 chr2R_14340001 RAL-306_75b 304 chr2R 14489229 14489247 chr2R 14489323 14489338 7 93 0.5 2.0 1.2 3.2 109 chr2R 14489229 intron L + chr2R 14489284 intron L + chr2R 14489338 intron L + chr2R_7_14485001 chr2R_14485001 RAL-306_75b 305 chr2R 14566450 14566479 chr2R 14566537 14566565 7 87 0.5 1.0 0.8 3.9 115 chr2R 14566450 intron ttv + chr2R 14566508 intron ttv + chr2R 14566565 intron ttv + chr2R_7_14565001 chr2R_14565001 RAL-306_75b 306 chr2R 14623876 14623887 chr2R 14623972 14623983 4 96 0.0 1.0 0.5 2.7 107 chr2R 14623876 intron Uhg5 + chr2R 14623930 5` UTR Uhg5 + chr2R 14623983 intron Uhg5 + chr2R_4_14620001 chr2R_14620001 RAL-306_75b 307 chr2R 14889211 14889214 chr2R 14897819 14897822 Max-element 5 8608 5.0 0.0 2.5 1.4 8611 chr2R 14889211 intergenic Cyp6a8 - chr2R 14893516 intergenic not near genes chr2R 14897822 intergenic not near genes chr2R_5_14890001 chr2R_14890001 RAL-306_75b 308 chr2R 14911702 14911721 chr2R 14911824 14911841 5 122 3.0 1.0 2.0 1.7 139 chr2R 14911702 intron CG10249 - chr2R 14911772 intron CG10249 - chr2R 14911841 intron CG10249 - chr2R_5_14910001 chr2R_14910001 RAL-306_75b 309 chr2R 14955666 14955700 chr2R 14955755 14955789 4 89 0.0 0.0 0.0 4.0 123 chr2R 14955666 intron aPKC - chr2R 14955728 intron aPKC - chr2R 14955789 intron aPKC - chr2R_4_14955001 chr2R_14955001 RAL-306_75b 310 chr2R 15004723 15004754 chr2R 15005052 15005083 jockey 6 328 1.5 0.0 0.8 3.3 360 chr2R 15004723 intergenic not near genes chr2R 15004903 intergenic not near genes chr2R 15005083 intergenic not near genes chr2R_6_15000001 chr2R_15000001 RAL-306_75b 311 chr2R 15065614 15065647 chr2R 15065692 15065725 4 78 0.5 0.5 0.5 2.7 111 chr2R 15065614 intergenic not near genes chr2R 15065670 intergenic not near genes chr2R 15065725 intergenic not near genes chr2R_4_15065001 chr2R_15065001 RAL-306_75b 312 chr2R 15137970 15138001 chr2R 15138050 15138082 10 81 0.0 0.0 0.0 10.0 112 chr2R 15137970 intron chn + chr2R 15138026 intron chn + chr2R 15138082 intron chn + chr2R_10_15135001 chr2R_15135001 RAL-306_75b 313 chr2R 15393294 15393326 chr2R 15393369 15393403 11 76 0.0 1.0 0.5 7.3 109 chr2R 15393294 intergenic not near genes chr2R 15393348 intergenic not near genes chr2R 15393403 intergenic not near genes chr2R_11_15390001 chr2R_15390001 RAL-306_75b 314 chr2R 15578592 15578593 chr2R 15578843 15578844 4 251 1.0 0.0 0.5 2.7 252 chr2R 15578592 intergenic not near genes chr2R 15578718 intergenic not near genes chr2R 15578844 intergenic not near genes chr2R_4_15575001 chr2R_15575001 RAL-306_75b 315 chr2R 16518049 16518059 chr2R 16518125 16518135 4 76 2.5 1.0 1.8 1.4 86 chr2R 16518049 intron Sema-2a + chr2R 16518092 intron Sema-2a + chr2R 16518135 intron Sema-2a + chr2R_4_16515001 chr2R_16515001 RAL-306_75b 316 chr2R 16617073 16617089 chr2R 16617152 16617168 5 79 0.0 1.5 0.8 2.8 95 chr2R 16617073 intron CG5065 + chr2R 16617120 intron CG5065 + chr2R 16617168 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-306_75b 317 chr2R 16701994 16702023 chr2R 16702081 16702110 12 87 1.5 0.0 0.8 6.7 116 chr2R 16701994 intron CG30463 - chr2R 16702052 intron CG30463 - chr2R 16702110 intron CG30463 - chr2R_12_16700001 chr2R_16700001 RAL-306_75b 318 chr2R 16775656 16775675 chr2R 16775923 16775942 10 267 0.5 3.5 2.0 3.3 286 chr2R 16775656 3` UTR Arp53D + chr2R 16775799 intergenic Arp53D + chr2R 16775942 intergenic Arp53D + chr2R_10_16775001 chr2R_16775001 RAL-306_75b 319 chr2R 16806354 16806367 chr2R 16806630 16806643 4 276 5.0 2.5 3.8 0.8 289 chr2R 16806354 intergenic not near genes chr2R 16806498 intergenic not near genes chr2R 16806643 intergenic not near genes chr2R_4_16805001 chr2R_16805001 RAL-306_75b 320 chr2R 17176357 17176389 chr2R 17182547 17182579 diver 9 6190 1.0 1.5 1.2 4.1 6222 chr2R 17176357 intergenic not near genes chr2R 17179468 intergenic not near genes chr2R 17182579 intergenic not near genes chr2R_9_17175001 chr2R_17175001 RAL-306_75b 321 chr2R 17236509 17236537 chr2R 17241712 17241741 copia 11 5203 1.0 2.0 1.5 4.4 5232 chr2R 17236509 intron mbl + chr2R 17239125 intron mbl + chr2R 17241741 intron mbl + chr2R_11_17235001 chr2R_17235001 RAL-306_75b 322 chr2R 17273094 17273121 chr2R 17273177 17273197 4 81 0.5 2.0 1.2 1.8 103 chr2R 17273094 intron mbl + chr2R 17273146 intron mbl + chr2R 17273197 intron mbl + chr2R_4_17270001 chr2R_17270001 RAL-306_75b 323 chr2R 17381591 17381613 chr2R 17381679 17381701 7 88 1.0 2.5 1.8 2.5 110 chr2R 17381591 intergenic not near genes chr2R 17381646 intergenic not near genes chr2R 17381701 intergenic not near genes chr2R_7_17380001 chr2R_17380001 RAL-306_75b 324 chr2R 17459005 17459039 chr2R 17459090 17459124 7 85 0.5 0.5 0.5 4.7 119 chr2R 17459005 intron CG14478 + chr2R 17459064 intron CG14478 + chr2R 17459124 intron CG14478 + chr2R_7_17455001 chr2R_17455001 RAL-306_75b 325 chr2R 17547578 17547605 chr2R 17547658 17547683 12 80 3.0 0.5 1.8 4.3 105 chr2R 17547578 intergenic RpL18A -,MESR4 + chr2R 17547630 intergenic MESR4 +,RpL18A - chr2R 17547683 intergenic MESR4 +,RpL18A - chr2R_12_17545001 chr2R_17545001 RAL-306_75b 326 chr2R 17598102 17598136 chr2R 17598185 17598219 5 83 3.0 3.5 3.2 1.2 117 chr2R 17598102 intron lack + chr2R 17598160 intron lack + chr2R 17598219 intron lack + chr2R_5_17595001 chr2R_17595001 RAL-306_75b 327 chr2R 17784024 17784040 chr2R 17784265 17784280 pogo 5 240 2.5 3.5 3.0 1.2 256 chr2R 17784024 intergenic mir-31a - chr2R 17784152 intergenic mir-31a - chr2R 17784280 intergenic mir-31a - chr2R_5_17780001 chr2R_17780001 RAL-306_75b 328 chr2R 17792602 17792616 chr2R 17792690 17792704 5 88 1.5 0.0 0.8 2.8 102 chr2R 17792602 intergenic CG5033 +,Dhit + chr2R 17792653 intergenic CG5033 +,Dhit + chr2R 17792704 intergenic Dhit +,CG5033 + chr2R_5_17790001 chr2R_17790001 RAL-306_75b 329 chr2R 17937536 17937551 chr2R 17937616 17937631 5 80 0.5 3.5 2.0 1.7 95 chr2R 17937536 intergenic not near genes chr2R 17937584 intergenic not near genes chr2R 17937631 intergenic not near genes chr2R_5_17935001 chr2R_17935001 RAL-306_75b 330 chr2R 17982927 17982953 chr2R 17983012 17983038 9 85 1.5 1.0 1.2 4.1 111 chr2R 17982927 intron dpr13 - chr2R 17982982 intron dpr13 - chr2R 17983038 intron dpr13 - chr2R_9_17980001 chr2R_17980001 RAL-306_75b 331 chr2R 18210788 18210796 chr2R 18210904 18210911 6 116 1.5 0.0 0.8 3.3 123 chr2R 18210788 5` UTR CR45147 + chr2R 18210850 intergenic CR45147 + chr2R 18210911 intergenic CR45147 + chr2R_6_18210001 chr2R_18210001 RAL-306_75b 332 chr2R 18308292 18308318 chr2R 18308398 18308424 6 106 3.0 1.5 2.2 1.9 132 chr2R 18308292 intron sbb - chr2R 18308358 intron sbb - chr2R 18308424 intron sbb - chr2R_6_18305001 chr2R_18305001 RAL-306_75b 333 chr2R 18408302 18408305 chr2R 18408423 18408426 6 120 0.0 4.5 2.2 1.9 124 chr2R 18408302 exon GstE8 + chr2R 18408364 exon GstE8 + chr2R 18408426 exon GstE8 + chr2R_6_18405001 chr2R_18405001 RAL-306_75b 334 chr2R 18590869 18590896 chr2R 18600021 18600046 roo 5 9152 3.0 0.5 1.8 1.8 9177 chr2R 18590869 intron GEFmeso - chr2R 18595458 intron GEFmeso - chr2R 18600046 intron GEFmeso - chr2R_5_18595001 chr2R_18595001 RAL-306_75b 335 chr2R 18605138 18605146 chr2R 18605228 18605238 6 91 3.5 1.0 2.2 1.9 100 chr2R 18605138 intron GEFmeso - chr2R 18605188 intron GEFmeso - chr2R 18605238 intron GEFmeso - chr2R_6_18605001 chr2R_18605001 RAL-306_75b 336 chr2R 18738206 18738239 chr2R 18738282 18738315 12 76 1.0 0.5 0.8 6.7 109 chr2R 18738206 intron Hs3st-A + chr2R 18738260 intron Hs3st-A + chr2R 18738315 intron Hs3st-A + chr2R_12_18735001 chr2R_18735001 RAL-306_75b 337 chr2R 18924281 18924296 chr2R 18924361 18924376 5 80 1.5 0.0 0.8 2.8 95 chr2R 18924281 intron sano + chr2R 18924328 intron sano + chr2R 18924376 intron sano + chr2R_5_18920001 chr2R_18920001 RAL-306_75b 338 chr2R 18926504 18926530 chr2R 18926591 18926614 6 86 0.5 1.0 0.8 3.3 110 chr2R 18926504 intron sano + chr2R 18926559 intron sano + chr2R 18926614 intron sano + chr2R_6_18925001 chr2R_18925001 RAL-306_75b 339 chr2R 18929117 18929125 chr2R 18929195 18929203 4 78 0.0 1.0 0.5 2.7 86 chr2R 18929117 intron sano + chr2R 18929160 intron sano + chr2R 18929203 intron sano + chr2R_4_18925001 chr2R_18925001 RAL-306_75b 340 chr2R 18953158 18953183 chr2R 18953245 18953270 7 87 3.0 1.5 2.2 2.2 112 chr2R 18953158 intron sano + chr2R 18953214 intron sano + chr2R 18953270 intron sano + chr2R_7_18950001 chr2R_18950001 RAL-306_75b 341 chr2R 19026049 19026057 chr2R 19026150 19026158 4 101 3.5 4.0 3.8 0.8 109 chr2R 19026049 intron 5-HT1B - chr2R 19026104 intron 5-HT1B - chr2R 19026158 intron 5-HT1B - chr2R_4_19025001 chr2R_19025001 RAL-306_75b 342 chr2R 19603980 19603988 chr2R 19604064 19604072 5 83 3.0 0.5 1.8 1.8 92 chr2R 19603980 intron sm - chr2R 19604026 intron sm - chr2R 19604072 intron sm - chr2R_5_19600001 chr2R_19600001 RAL-306_75b 343 chr2R 19639587 19639599 chr2R 19639663 19639675 4 76 0.5 1.5 1.0 2.0 88 chr2R 19639587 intergenic not near genes chr2R 19639631 intergenic not near genes chr2R 19639675 intergenic not near genes chr2R_4_19635001 chr2R_19635001 RAL-306_75b 344 chr2R 19774010 19774016 chr2R 19774123 19774129 4 113 5.0 3.0 4.0 0.8 119 chr2R 19774010 intergenic not near genes chr2R 19774070 intergenic not near genes chr2R 19774129 intergenic not near genes chr2R_4_19770001 chr2R_19770001 RAL-306_75b 345 chr2R 19776609 19776621 chr2R 19779931 19779943 jockey 5 3322 4.5 0.0 2.2 1.6 3334 chr2R 19776609 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779943 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-306_75b 346 chr2R 19807695 19807701 chr2R 19807775 19807783 4 82 0.0 2.0 1.0 2.0 88 chr2R 19807695 intergenic not near genes chr2R 19807739 intergenic not near genes chr2R 19807783 intergenic not near genes chr2R_4_19805001 chr2R_19805001 RAL-306_75b 347 chr2R 19810650 19810685 chr2R 19810769 19810796 4 117 0.0 4.0 2.0 1.3 146 chr2R 19810650 intergenic not near genes chr2R 19810723 intergenic not near genes chr2R 19810796 intergenic not near genes chr2R_4_19810001 chr2R_19810001 RAL-306_75b 348 chr2R 19914847 19914861 chr2R 19922259 19922273 mdg1 4 7412 2.0 0.0 1.0 2.0 7426 chr2R 19914847 intergenic not near genes chr2R 19918560 intergenic not near genes chr2R 19922273 intergenic not near genes chr2R_4_19915001 chr2R_19915001 RAL-306_75b 349 chr2R 19957430 19957461 chr2R 19962632 19962660 copia 4 5200 1.0 0.0 0.5 2.7 5230 chr2R 19957430 intergenic CG44623 + chr2R 19960045 intergenic not near genes chr2R 19962660 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-306_75b 350 chr2R 20008189 20008196 chr2R 20008278 20008285 4 89 2.0 4.5 3.2 1.0 96 chr2R 20008189 intergenic not near genes chr2R 20008237 intergenic not near genes chr2R 20008285 intergenic not near genes chr2R_4_20005001 chr2R_20005001 RAL-306_75b 351 chr2R 20008908 20008919 chr2R 20008989 20009001 4 81 1.0 0.5 0.8 2.2 93 chr2R 20008908 intergenic not near genes chr2R 20008954 intergenic not near genes chr2R 20009001 intergenic not near genes chr2R_4_20005001 chr2R_20005001 RAL-306_75b 352 chr2R 20080602 20080616 chr2R 20080679 20080693 5 77 0.0 3.0 1.5 2.0 91 chr2R 20080602 intergenic not near genes chr2R 20080648 intergenic not near genes chr2R 20080693 intergenic not near genes chr2R_5_20080001 chr2R_20080001 RAL-306_75b 353 chr2R 20502293 20502313 chr2R 20502407 20502427 5 114 0.0 1.0 0.5 3.3 134 chr2R 20502293 intergenic not near genes chr2R 20502360 intergenic not near genes chr2R 20502427 intergenic not near genes chr2R_5_20500001 chr2R_20500001 RAL-306_75b 354 chr2R 20783314 20783330 chr2R 20788086 20788102 F-element 4 4772 3.0 3.0 3.0 1.0 4788 chr2R 20783314 intergenic not near genes chr2R 20785708 intergenic not near genes chr2R 20788102 intergenic CG43666 - chr2R_4_20785001 chr2R_20785001 RAL-306_75b 355 chr2R 20867761 20867769 chr2R 20867838 20867847 4 78 1.0 2.0 1.5 1.6 86 chr2R 20867761 intergenic not near genes chr2R 20867804 intergenic not near genes chr2R 20867847 intergenic not near genes chr2R_4_20865001 chr2R_20865001 RAL-306_75b 356 chr2R 21082945 21082975 chr2R 21083029 21083059 4 84 2.5 3.5 3.0 1.0 114 chr2R 21082945 intron Treh + chr2R 21083002 intron Treh + chr2R 21083059 intron Treh + chr2R_4_21080001 chr2R_21080001 RAL-306_75b 357 chr2R 21322956 21322967 chr2R 21323040 21323051 5 84 0.5 1.0 0.8 2.8 95 chr2R 21322956 5` UTR CG30394 - chr2R 21323004 5` UTR CG30394 - chr2R 21323051 5` UTR CG30394 - chr2R_5_21320001 chr2R_21320001 RAL-306_75b 358 chr2R 21710938 21710964 chr2R 21711035 21711061 5 97 3.0 2.5 2.8 1.3 123 chr2R 21710938 intron,intron HmgD +,CG30403 - chr2R 21711000 intron,intron HmgD +,CG30403 - chr2R 21711061 intron,intron HmgD +,CG30403 - chr2R_5_21710001 chr2R_21710001 RAL-306_75b 359 chr2R 21738275 21738307 chr2R 21747435 21747467 roo 4 9160 0.5 0.0 0.2 3.3 9192 chr2R 21738275 intergenic not near genes chr2R 21742871 intergenic not near genes chr2R 21747467 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-306_75b 360 chr2R 21753092 21753114 chr2R 21753577 21753599 roo 7 485 2.0 3.0 2.5 2.0 507 chr2R 21753092 intergenic not near genes chr2R 21753346 intergenic not near genes chr2R 21753599 intergenic not near genes chr2R_7_21750001 chr2R_21750001 RAL-306_75b 361 chr2R 21809523 21809551 chr2R 21817763 21817791 roo 6 8240 1.5 0.0 0.8 3.3 8268 chr2R 21809523 intergenic not near genes chr2R 21813657 intergenic not near genes chr2R 21817791 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-306_75b 362 chr2R 21946771 21946798 chr2R 21946867 21946894 7 96 3.5 4.5 4.0 1.4 123 chr2R 21946771 intergenic not near genes chr2R 21946832 intergenic not near genes chr2R 21946894 intergenic not near genes chr2R_7_21945001 chr2R_21945001 RAL-306_75b 363 chr2R 22013001 22013009 chr2R 22013096 22013103 4 94 1.0 1.5 1.2 1.8 102 chr2R 22013001 intron CG34370 - chr2R 22013052 intron CG34370 - chr2R 22013103 intron CG34370 - chr2R_4_22010001 chr2R_22010001 RAL-306_75b 364 chr2R 22151883 22151909 chr2R 22151959 22151982 4 75 1.0 0.5 0.8 2.2 99 chr2R 22151883 intron a + chr2R 22151932 intron a + chr2R 22151982 intron a + chr2R_4_22150001 chr2R_22150001 RAL-306_75b 365 chr2R 22182917 22182926 chr2R 22183001 22183010 4 84 2.0 2.0 2.0 1.3 93 chr2R 22182917 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22182964 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183010 intergenic MED16 +,CG11170 -,CG11275 + chr2R_4_22180001 chr2R_22180001 RAL-306_75b 366 chr2R 22349691 22349721 chr2R 22351474 22351505 jockey 5 1784 0.5 1.5 1.0 2.5 1814 chr2R 22349691 intron Liprin-gamma - chr2R 22350598 intron Liprin-gamma - chr2R 22351505 intron Liprin-gamma - chr2R_5_22350001 chr2R_22350001 RAL-306_75b 367 chr2R 22362660 22362672 chr2R 22362739 22362751 5 79 1.5 1.5 1.5 2.0 91 chr2R 22362660 intron Liprin-gamma - chr2R 22362706 intron Liprin-gamma - chr2R 22362751 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-306_75b 368 chr2R 22460387 22460404 chr2R 22460466 22460483 5 79 0.5 1.0 0.8 2.8 96 chr2R 22460387 intron CG10384 + chr2R 22460435 intron CG10384 + chr2R 22460483 intron CG10384 + chr2R_5_22460001 chr2R_22460001 RAL-306_75b 369 chr2R 22499854 22499883 chr2R 22499928 22499958 6 75 0.0 1.0 0.5 4.0 104 chr2R 22499854 intron px - chr2R 22499906 intron px - chr2R 22499958 intron px - chr2R_6_22495001 chr2R_22495001 RAL-306_75b 370 chr2R 22525752 22525786 chr2R 22529307 22529340 jockey 8 3555 0.0 2.0 1.0 4.0 3588 chr2R 22525752 intron px - chr2R 22527546 intron px - chr2R 22529340 intron px - chr2R_8_22525001 chr2R_22525001 RAL-306_75b 371 chr2R 22623468 22623485 chr2R 22623608 22623625 6 140 0.0 2.0 1.0 3.0 157 chr2R 22623468 intron CG33143 + chr2R 22623546 intron CG33143 + chr2R 22623625 intron CG33143 + chr2R_6_22620001 chr2R_22620001 RAL-306_75b 372 chr2R 22679752 22679781 chr2R 22679828 22679854 13 76 1.0 0.0 0.5 8.7 102 chr2R 22679752 intergenic not near genes chr2R 22679803 intergenic not near genes chr2R 22679854 intergenic not near genes chr2R_13_22675001 chr2R_22675001 RAL-306_75b 373 chr2R 22789818 22789839 chr2R 22790104 22790125 5 286 1.0 2.0 1.5 2.0 307 chr2R 22789818 intron CG42260 - chr2R 22789972 intron CG42260 - chr2R 22790125 intron CG42260 - chr2R_5_22785001 chr2R_22785001 RAL-306_75b 374 chr2R 22945054 22945083 chr2R 22945167 22945197 9 114 3.5 0.5 2.0 3.0 143 chr2R 22945054 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945197 intergenic CG42694 + chr2R_9_22945001 chr2R_22945001 RAL-306_75b 375 chr2R 23000149 23000166 chr2R 23000229 23000246 5 80 2.0 0.0 1.0 2.5 97 chr2R 23000149 intron twi + chr2R 23000198 intron twi + chr2R 23000246 intron twi + chr2R_5_23000001 chr2R_23000001 RAL-306_75b 376 chr2R 23052651 23052678 chr2R 23052727 23052754 7 76 3.5 3.0 3.2 1.7 103 chr2R 23052651 intergenic not near genes chr2R 23052702 intergenic not near genes chr2R 23052754 intergenic not near genes chr2R_7_23050001 chr2R_23050001 RAL-306_75b 377 chr2R 23070410 23070421 chr2R 23070505 23070517 6 95 3.0 5.5 4.2 1.2 107 chr2R 23070410 intron l(2)k09913 + chr2R 23070464 intron l(2)k09913 + chr2R 23070517 intron l(2)k09913 + chr2R_6_23070001 chr2R_23070001 RAL-306_75b 378 chr2R 23134837 23134844 chr2R 23134920 23134927 5 83 0.5 4.5 2.5 1.4 90 chr2R 23134837 intergenic not near genes chr2R 23134882 intergenic not near genes chr2R 23134927 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RAL-306_75b 379 chr2R 23188564 23188590 chr2R 23188642 23188668 5 78 1.0 2.0 1.5 2.0 104 chr2R 23188564 intron CG34371 - chr2R 23188616 intron CG34371 - chr2R 23188668 intron CG34371 - chr2R_5_23185001 chr2R_23185001 RAL-306_75b 380 chr2R 23402609 23402629 chr2R 23407684 23407705 flea 4 5076 3.0 1.5 2.2 1.2 5096 chr2R 23402609 intergenic CG3520 - chr2R 23405157 intergenic not near genes chr2R 23407705 intergenic not near genes chr2R_4_23405001 chr2R_23405001 RAL-306_75b 381 chr2R 23407965 23407990 chr2R 23408220 23408244 9 255 3.0 0.0 1.5 3.6 279 chr2R 23407965 intergenic not near genes chr2R 23408104 intergenic not near genes chr2R 23408244 intergenic not near genes chr2R_9_23405001 chr2R_23405001 RAL-306_75b 382 chr2R 23429098 23429104 chr2R 23429256 23429262 4 158 0.5 4.5 2.5 1.1 164 chr2R 23429098 intron CG9815 - chr2R 23429180 intron CG9815 - chr2R 23429262 intron CG9815 - chr2R_4_23425001 chr2R_23425001 RAL-306_75b 383 chr2R 23744764 23744786 chr2R 23744843 23744865 6 79 3.0 1.0 2.0 2.0 101 chr2R 23744764 intron egl - chr2R 23744814 intron egl - chr2R 23744865 intron egl - chr2R_6_23740001 chr2R_23740001 RAL-306_75b 384 chr2R 23784480 23784506 chr2R 23784558 23784584 7 78 0.5 5.0 2.8 1.8 104 chr2R 23784480 intron CG9850 - chr2R 23784532 intron CG9850 - chr2R 23784584 intron CG9850 - chr2R_7_23780001 chr2R_23780001 RAL-306_75b 385 chr2R 23799220 23799250 chr2R 23799303 23799334 6 83 1.0 0.5 0.8 3.3 114 chr2R 23799220 intergenic not near genes chr2R 23799277 intergenic not near genes chr2R 23799334 intergenic not near genes chr2R_6_23795001 chr2R_23795001 RAL-306_75b 386 chr2R 23914303 23914330 chr2R 23921927 23921954 412 4 7624 0.5 5.5 3.0 1.0 7651 chr2R 23914303 exon kcc + chr2R 23918128 intron kcc + chr2R 23921954 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-306_75b 387 chr2R 24031387 24031414 chr2R 24031471 24031495 14 84 4.0 2.0 3.0 3.5 108 chr2R 24031387 5` UTR CG30172 - chr2R 24031441 intergenic CG30172 -,Chi - chr2R 24031495 intergenic Chi -,CG30172 - chr2R_14_24030001 chr2R_24030001 RAL-306_75b 388 chr2R 24177244 24177266 chr2R 24184729 24184750 412 7 7485 5.5 5.0 5.2 1.1 7506 chr2R 24177244 3` UTR Nop60B + chr2R 24180997 intron Nop60B + chr2R 24184750 3` UTR Nop60B + chr2R_7_24180001 chr2R_24180001 RAL-306_75b 389 chr2R 24212336 24212356 chr2R 24212434 24212453 4 98 1.0 0.0 0.5 2.7 117 chr2R 24212336 intergenic CG30419 - chr2R 24212394 intergenic CG30419 - chr2R 24212453 intergenic CG30419 - chr2R_4_24210001 chr2R_24210001 RAL-306_75b 390 chr2R 24517935 24517955 chr2R 24518023 24518045 5 88 6.0 5.5 5.8 0.7 110 chr2R 24517935 intergenic Ir60b + chr2R 24517990 intergenic not near genes chr2R 24518045 intergenic not near genes chr2R_5_24515001 chr2R_24515001 RAL-306_75b 391 chr2R 24634000 24634021 chr2R 24634081 24634102 5 80 1.5 0.5 1.0 2.5 102 chr2R 24634000 intron CG13594 - chr2R 24634051 intron CG13594 - chr2R 24634102 intron CG13594 - chr2R_5_24630001 chr2R_24630001 RAL-306_75b 392 chr2R 24718459 24718487 chr2R 24718541 24718569 7 82 2.0 1.0 1.5 2.8 110 chr2R 24718459 intron Mid1 - chr2R 24718514 intron Mid1 - chr2R 24718569 intron Mid1 - chr2R_7_24715001 chr2R_24715001 RAL-306_75b 393 chr2R 24727894 24727917 chr2R 24735402 24735425 mdg1 6 7507 1.0 2.5 1.8 2.1 7531 chr2R 24727894 intron Mid1 - chr2R 24731660 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_6_24730001 chr2R_24730001 RAL-306_75b 394 chr2R 24763623 24763630 chr2R 24765599 24765604 G2 5 1976 1.5 1.0 1.2 2.3 1981 chr2R 24763623 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765604 exon CG3894 + chr2R_5_24760001 chr2R_24760001 RAL-306_75b 395 chr2R 24859846 24859870 chr2R 24859932 24859956 7 86 1.5 0.5 1.0 3.5 110 chr2R 24859846 5` UTR CR44829 + chr2R 24859901 5` UTR CR44829 + chr2R 24859956 5` UTR CR44829 + chr2R_7_24855001 chr2R_24855001 RAL-306_75b 396 chr2R 25022641 25022655 chr2R 25022725 25022737 5 84 2.0 1.5 1.8 1.8 96 chr2R 25022641 intron uzip + chr2R 25022689 intron uzip + chr2R 25022737 intron uzip + chr2R_5_25020001 chr2R_25020001 RAL-306_75b 397 chr2R 25101278 25101299 chr2R 25101380 25101401 9 102 0.5 1.0 0.8 5.0 123 chr2R 25101278 intron lov - chr2R 25101340 intron lov - chr2R 25101401 intron lov - chr2R_9_25100001 chr2R_25100001 RAL-306_75b 398 chr2R 25122969 25122989 chr2R 25123046 25123068 4 78 0.0 0.5 0.2 3.3 99 chr2R 25122969 intron lov - chr2R 25123018 intron lov - chr2R 25123068 intron lov - chr2R_4_25120001 chr2R_25120001 RAL-306_75b 399 chr2R 25180775 25180791 chr2R 25180851 25180868 5 77 0.0 2.5 1.2 2.3 93 chr2R 25180775 intergenic not near genes chr2R 25180822 intergenic not near genes chr2R 25180868 intergenic not near genes chr2R_5_25180001 chr2R_25180001 RAL-306_75b 400 chr2R 25253444 25253476 chr2R 25253520 25253552 5 76 1.0 0.5 0.8 2.8 108 chr2R 25253444 intron,intron CG9380 -,CG30428 + chr2R 25253498 intron,intron CG9380 -,CG30428 + chr2R 25253552 intron,intron CG9380 -,CG30428 + chr2R_5_25250001 chr2R_25250001 RAL-306_75b 401 chr3L 68993 69016 chr3L 69079 69103 4 87 0.5 2.0 1.2 1.8 110 chr3L 68993 3` UTR Lsp1gamma + chr3L 69048 intergenic Lsp1gamma +,CR44510 + chr3L 69103 intergenic CR44510 +,Lsp1gamma + chr3L_4_65001 chr3L_65001 RAL-306_75b 402 chr3L 421052 421072 chr3L 421148 421168 4 96 4.0 3.0 3.5 0.9 116 chr3L 421052 intergenic not near genes chr3L 421110 intergenic not near genes chr3L 421168 intergenic not near genes chr3L_4_420001 chr3L_420001 RAL-306_75b 403 chr3L 561493 561503 chr3L 561569 561577 5 76 3.0 0.0 1.5 2.0 84 chr3L 561493 intron hipk + chr3L 561535 intron hipk + chr3L 561577 intron hipk + chr3L_5_560001 chr3L_560001 RAL-306_75b 404 chr3L 566812 566817 chr3L 567165 567170 4 353 0.0 2.0 1.0 2.0 358 chr3L 566812 intron hipk + chr3L 566991 intron hipk + chr3L 567170 intron hipk + chr3L_4_565001 chr3L_565001 RAL-306_75b 405 chr3L 646805 646825 chr3L 646883 646901 6 77 1.0 1.0 1.0 3.0 96 chr3L 646805 intergenic not near genes chr3L 646853 intergenic not near genes chr3L 646901 intergenic not near genes chr3L_6_645001 chr3L_645001 RAL-306_75b 406 chr3L 857998 858023 chr3L 866479 866500 Tirant 5 8480 0.0 2.0 1.0 2.5 8502 chr3L 857998 intergenic not near genes chr3L 862249 intergenic not near genes chr3L 866500 5` UTR CG12502 + chr3L_5_860001 chr3L_860001 RAL-306_75b 407 chr3L 925178 925200 chr3L 932604 932626 mdg1 7 7426 1.5 2.0 1.8 2.5 7448 chr3L 925178 intron Glut1 + chr3L 928902 intron Glut1 + chr3L 932626 intron Glut1 + chr3L_7_925001 chr3L_925001 RAL-306_75b 408 chr3L 939776 939801 chr3L 940897 940922 jockey 8 1121 1.5 0.5 1.0 4.0 1146 chr3L 939776 intron Glut1 + chr3L 940349 intron Glut1 + chr3L 940922 intron Glut1 + chr3L_8_940001 chr3L_940001 RAL-306_75b 409 chr3L 961018 961039 chr3L 961111 961131 7 93 3.0 2.0 2.5 2.0 113 chr3L 961018 intron Glut1 + chr3L 961074 intron Glut1 + chr3L 961131 intron Glut1 + chr3L_7_960001 chr3L_960001 RAL-306_75b 410 chr3L 1031588 1031616 chr3L 1031664 1031691 4 76 1.0 3.5 2.2 1.2 103 chr3L 1031588 intron trio - chr3L 1031640 intron trio - chr3L 1031691 intron trio - chr3L_4_1030001 chr3L_1030001 RAL-306_75b 411 chr3L 1083362 1083381 chr3L 1083452 1083472 5 90 2.5 3.0 2.8 1.3 110 chr3L 1083362 intron bab1 - chr3L 1083417 intron bab1 - chr3L 1083472 intron bab1 - chr3L_5_1080001 chr3L_1080001 RAL-306_75b 412 chr3L 1219597 1219624 chr3L 1227330 1227357 412 5 7732 1.0 3.5 2.2 1.6 7760 chr3L 1219597 intron mwh + chr3L 1223477 intron mwh + chr3L 1227357 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-306_75b 413 chr3L 1290030 1290048 chr3L 1290136 1290154 6 104 0.0 4.0 2.0 2.0 124 chr3L 1290030 intron CG32333 + chr3L 1290092 intron CG32333 + chr3L 1290154 intron CG32333 + chr3L_6_1290001 chr3L_1290001 RAL-306_75b 414 chr3L 1396742 1396758 chr3L 1396826 1396841 7 83 5.0 4.5 4.8 1.2 99 chr3L 1396742 intron Ptp61F - chr3L 1396792 intron Ptp61F - chr3L 1396841 intron Ptp61F - chr3L_7_1395001 chr3L_1395001 RAL-306_75b 415 chr3L 1505999 1506022 chr3L 1513596 1513618 17.6 4 7597 0.0 2.0 1.0 2.0 7619 chr3L 1505999 intron,intron Psa +,cue - chr3L 1509808 intron,intron Psa +,cue - chr3L 1513618 intron,intron Psa +,cue - chr3L_4_1505001 chr3L_1505001 RAL-306_75b 416 chr3L 1740853 1740867 chr3L 1741096 1741109 pogo 6 243 4.0 0.5 2.2 1.9 256 chr3L 1740853 intron Gk + chr3L 1740981 intron Gk + chr3L 1741109 intron Gk + chr3L_6_1740001 chr3L_1740001 RAL-306_75b 417 chr3L 2308009 2308031 chr3L 2308115 2308136 9 106 2.5 2.0 2.2 2.8 127 chr3L 2308009 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308136 intergenic not near genes chr3L_9_2305001 chr3L_2305001 RAL-306_75b 418 chr3L 2321162 2321183 chr3L 2321239 2321260 6 76 1.0 1.5 1.2 2.7 98 chr3L 2321162 intergenic not near genes chr3L 2321211 intergenic not near genes chr3L 2321260 intergenic not near genes chr3L_6_2320001 chr3L_2320001 RAL-306_75b 419 chr3L 2626417 2626442 chr3L 2626541 2626566 5 124 0.5 0.5 0.5 3.3 149 chr3L 2626417 intron Pxn - chr3L 2626492 intron Pxn - chr3L 2626566 intron Pxn - chr3L_5_2625001 chr3L_2625001 RAL-306_75b 420 chr3L 2680538 2680543 chr3L 2680615 2680623 5 79 0.0 0.0 0.0 5.0 85 chr3L 2680538 intron Fife - chr3L 2680580 intron Fife - chr3L 2680623 intron Fife - chr3L_5_2680001 chr3L_2680001 RAL-306_75b 421 chr3L 2683951 2683972 chr3L 2684026 2684048 5 76 1.0 0.0 0.5 3.3 97 chr3L 2683951 intron Fife - chr3L 2684000 intron Fife - chr3L 2684048 intron Fife - chr3L_5_2680001 chr3L_2680001 RAL-306_75b 422 chr3L 2854492 2854500 chr3L 2854570 2854578 4 78 2.0 2.0 2.0 1.3 86 chr3L 2854492 intron CG43444 - chr3L 2854535 intron CG43444 - chr3L 2854578 intron CG43444 - chr3L_4_2850001 chr3L_2850001 RAL-306_75b 423 chr3L 2927840 2927871 chr3L 2936117 2936148 Tirant 8 8277 4.0 3.5 3.8 1.7 8308 chr3L 2927840 intron Shab + chr3L 2931994 intron Shab + chr3L 2936148 intron Shab + chr3L_8_2930001 chr3L_2930001 RAL-306_75b 424 chr3L 2983293 2983306 chr3L 2983373 2983388 7 81 2.5 0.0 1.2 3.2 95 chr3L 2983293 exon CG2107 + chr3L 2983340 3` UTR CG2107 + chr3L 2983388 3` UTR CG2107 + chr3L_7_2980001 chr3L_2980001 RAL-306_75b 425 chr3L 3259818 3259831 chr3L 3259918 3259931 11 100 0.0 0.0 0.0 11.0 113 chr3L 3259818 intron ckd + chr3L 3259874 intron ckd + chr3L 3259931 intron ckd + chr3L_11_3255001 chr3L_3255001 RAL-306_75b 426 chr3L 3281458 3281474 chr3L 3281954 3281968 Doc 4 495 0.5 2.0 1.2 1.8 510 chr3L 3281458 intron CG12017 + chr3L 3281713 intron CG12017 + chr3L 3281968 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-306_75b 427 chr3L 3314139 3314168 chr3L 3314273 3314302 6 134 3.5 3.5 3.5 1.3 163 chr3L 3314139 intergenic ZnT63C +,Drsl2 + chr3L 3314220 intergenic Drsl2 +,ZnT63C + chr3L 3314302 intergenic Drsl2 +,ZnT63C + chr3L_6_3310001 chr3L_3310001 RAL-306_75b 428 chr3L 3312265 3312303 chr3L 3315546 3315584 6 3281 9.0 17.5 13.2 0.4 3319 chr3L 3312265 exon ZnT63C + chr3L 3313924 3` UTR ZnT63C + chr3L 3315584 intergenic Drsl4 +,Drsl3 + chr3L_6_3310001 chr3L_3310001 RAL-306_75b 429 chr3L 3475075 3475105 chr3L 3475519 3475549 jockey 8 444 1.0 1.0 1.0 4.0 474 chr3L 3475075 intron CG42324 + chr3L 3475312 intron CG42324 + chr3L 3475549 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-306_75b 430 chr3L 3598210 3598241 chr3L 3598294 3598325 5 84 0.0 0.5 0.2 4.2 115 chr3L 3598210 exon Eip63E + chr3L 3598268 intron Eip63E + chr3L 3598325 intron Eip63E + chr3L_5_3595001 chr3L_3595001 RAL-306_75b 431 chr3L 3797238 3797254 chr3L 3797321 3797336 5 83 1.0 3.5 2.2 1.6 98 chr3L 3797238 intron CG32264 - chr3L 3797287 intron CG32264 - chr3L 3797336 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-306_75b 432 chr3L 4013902 4013929 chr3L 4014086 4014113 5 184 1.0 0.5 0.8 2.8 211 chr3L 4013902 intergenic not near genes chr3L 4014008 intergenic not near genes chr3L 4014113 intergenic not near genes chr3L_5_4010001 chr3L_4010001 RAL-306_75b 433 chr3L 4015734 4015764 chr3L 4015817 4015847 5 83 2.5 0.5 1.5 2.0 113 chr3L 4015734 intergenic not near genes chr3L 4015790 intergenic not near genes chr3L 4015847 intergenic not near genes chr3L_5_4015001 chr3L_4015001 RAL-306_75b 434 chr3L 4146812 4146835 chr3L 4146894 4146917 4 82 0.0 0.5 0.2 3.3 105 chr3L 4146812 intergenic not near genes chr3L 4146864 intergenic not near genes chr3L 4146917 intergenic not near genes chr3L_4_4145001 chr3L_4145001 RAL-306_75b 435 chr3L 4384897 4384918 chr3L 4384990 4385010 4 93 2.5 1.5 2.0 1.3 113 chr3L 4384897 intron slow + chr3L 4384954 intron slow + chr3L 4385010 intron slow + chr3L_4_4380001 chr3L_4380001 RAL-306_75b 436 chr3L 4397443 4397462 chr3L 4397573 4397592 4 129 2.5 0.5 1.5 1.6 149 chr3L 4397443 intron slow + chr3L 4397518 intron slow + chr3L 4397592 intron slow + chr3L_4_4395001 chr3L_4395001 RAL-306_75b 437 chr3L 4416025 4416046 chr3L 4416107 4416128 4 81 0.5 2.0 1.2 1.8 103 chr3L 4416025 intron DOR + chr3L 4416076 intron DOR + chr3L 4416128 intron DOR + chr3L_4_4415001 chr3L_4415001 RAL-306_75b 438 chr3L 4580321 4580328 chr3L 4580407 4580414 4 86 2.0 1.5 1.8 1.4 93 chr3L 4580321 intron CG42540 + chr3L 4580368 intron CG42540 + chr3L 4580414 intron CG42540 + chr3L_4_4580001 chr3L_4580001 RAL-306_75b 439 chr3L 4629614 4629640 chr3L 4629782 4629810 5 169 0.0 0.5 0.2 4.2 196 chr3L 4629614 3` UTR axo - chr3L 4629712 3` UTR axo - chr3L 4629810 3` UTR axo - chr3L_5_4625001 chr3L_4625001 RAL-306_75b 440 chr3L 4748683 4748694 chr3L 4748821 4748827 6 137 0.5 1.0 0.8 3.3 144 chr3L 4748683 intron RhoGEF64C + chr3L 4748755 intron RhoGEF64C + chr3L 4748827 intron RhoGEF64C + chr3L_6_4745001 chr3L_4745001 RAL-306_75b 441 chr3L 4990751 4990775 chr3L 4990864 4990888 7 113 2.0 0.5 1.2 3.2 137 chr3L 4990751 intron Con - chr3L 4990820 intron Con - chr3L 4990888 intron Con - chr3L_7_4990001 chr3L_4990001 RAL-306_75b 442 chr3L 5104484 5104512 chr3L 5124618 5124646 10 20134 1.0 0.0 0.5 6.7 20162 chr3L 5104484 intergenic not near genes chr3L 5114565 intergenic not near genes chr3L 5124646 intergenic not near genes chr3L_10_5110001 chr3L_5110001 RAL-306_75b 443 chr3L 5164640 5164670 chr3L 5164716 5164746 5 76 1.0 0.0 0.5 3.3 106 chr3L 5164640 intron shep - chr3L 5164693 intron shep - chr3L 5164746 intron shep - chr3L_5_5160001 chr3L_5160001 RAL-306_75b 444 chr3L 5212249 5212262 chr3L 5212331 5212344 5 83 2.0 1.0 1.5 2.0 95 chr3L 5212249 intron shep - chr3L 5212296 intron shep - chr3L 5212344 intron shep - chr3L_5_5210001 chr3L_5210001 RAL-306_75b 445 chr3L 5261168 5261176 chr3L 5261247 5261255 4 79 2.0 2.0 2.0 1.3 87 chr3L 5261168 intron shep - chr3L 5261212 intron shep - chr3L 5261255 intron shep - chr3L_4_5260001 chr3L_5260001 RAL-306_75b 446 chr3L 5307720 5307737 chr3L 5307832 5307849 4 112 1.0 4.5 2.8 1.1 129 chr3L 5307720 intergenic not near genes chr3L 5307784 intergenic not near genes chr3L 5307849 intergenic not near genes chr3L_4_5305001 chr3L_5305001 RAL-306_75b 447 chr3L 5388201 5388219 chr3L 5388525 5388540 7 323 3.5 0.0 1.8 2.5 339 chr3L 5388201 intergenic not near genes chr3L 5388370 intergenic not near genes chr3L 5388540 intergenic not near genes chr3L_7_5385001 chr3L_5385001 RAL-306_75b 448 chr3L 5449543 5449563 chr3L 5449622 5449642 7 79 0.0 0.0 0.0 7.0 99 chr3L 5449543 intergenic not near genes chr3L 5449592 intergenic not near genes chr3L 5449642 intergenic not near genes chr3L_7_5445001 chr3L_5445001 RAL-306_75b 449 chr3L 5482941 5483079 chr3L 5483149 5483197 5 135 0.0 0.0 0.0 5.0 256 chr3L 5482941 exon CG4835 + chr3L 5483069 exon CG4835 + chr3L 5483197 exon CG4835 + chr3L_5_5480001 chr3L_5480001 RAL-306_75b 450 chr3L 5493198 5493220 chr3L 5493344 5493366 4 145 1.5 1.5 1.5 1.6 168 chr3L 5493198 intergenic CR44520 - chr3L 5493282 intergenic CR44520 - chr3L 5493366 intergenic CR44520 - chr3L_4_5490001 chr3L_5490001 RAL-306_75b 451 chr3L 5537734 5537748 chr3L 5538076 5538090 jockey 5 342 2.0 5.0 3.5 1.1 356 chr3L 5537734 intergenic not near genes chr3L 5537912 intergenic CG10625 - chr3L 5538090 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-306_75b 452 chr3L 5926317 5926352 chr3L 5926506 5926542 BS 7 190 1.0 2.5 1.8 2.5 225 chr3L 5926317 intron Vap-33B + chr3L 5926430 intron Vap-33B + chr3L 5926542 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-306_75b 453 chr3L 5983838 5983839 chr3L 5983955 5983960 4 120 0.5 0.0 0.2 3.3 122 chr3L 5983838 3` UTR CR45439 - chr3L 5983899 intergenic CR45439 -,CR45440 - chr3L 5983960 intergenic CR45439 -,CR45440 - chr3L_4_5980001 chr3L_5980001 RAL-306_75b 454 chr3L 6001687 6001698 chr3L 6004387 6004398 jockey 8 2700 1.5 1.0 1.2 3.6 2711 chr3L 6001687 intron PVRAP + chr3L 6003042 intron PVRAP + chr3L 6004398 intron PVRAP + chr3L_8_6000001 chr3L_6000001 RAL-306_75b 455 chr3L 6159942 6159944 chr3L 6160022 6160024 4 80 2.0 0.0 1.0 2.0 82 chr3L 6159942 intergenic not near genes chr3L 6159983 intergenic not near genes chr3L 6160024 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-306_75b 456 chr3L 6267316 6267348 chr3L 6267404 6267436 9 88 1.0 2.5 1.8 3.2 120 chr3L 6267316 intergenic not near genes chr3L 6267376 intergenic not near genes chr3L 6267436 intergenic not near genes chr3L_9_6265001 chr3L_6265001 RAL-306_75b 457 chr3L 6604294 6604300 chr3L 6604371 6604374 5 76 0.0 7.0 3.5 1.1 80 chr3L 6604294 intron CG8368 + chr3L 6604334 intron CG8368 + chr3L 6604374 intron,3` UTR CG8368 +,zpg - chr3L_5_6600001 chr3L_6600001 RAL-306_75b 458 chr3L 6810091 6810092 chr3L 6810177 6810180 4 87 3.5 4.0 3.8 0.8 89 chr3L 6810091 intergenic not near genes chr3L 6810136 intergenic not near genes chr3L 6810180 intergenic not near genes chr3L_4_6810001 chr3L_6810001 RAL-306_75b 459 chr3L 6887515 6887550 chr3L 6895007 6895042 roo 11 7491 0.5 1.0 0.8 6.1 7527 chr3L 6887515 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895042 intergenic not near genes chr3L_11_6890001 chr3L_6890001 RAL-306_75b 460 chr3L 6994889 6994916 chr3L 6995500 6995527 BS 4 611 0.0 3.0 1.5 1.6 638 chr3L 6994889 intergenic bin + chr3L 6995208 intergenic not near genes chr3L 6995527 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-306_75b 461 chr3L 7150876 7150891 chr3L 7150952 7150967 6 76 2.0 1.0 1.5 2.4 91 chr3L 7150876 intron corn - chr3L 7150922 intron corn - chr3L 7150967 intron corn - chr3L_6_7150001 chr3L_7150001 RAL-306_75b 462 chr3L 7187401 7187415 chr3L 7187483 7187497 4 82 0.0 0.0 0.0 4.0 96 chr3L 7187401 intron Dscam2 - chr3L 7187449 intron Dscam2 - chr3L 7187497 intron Dscam2 - chr3L_4_7185001 chr3L_7185001 RAL-306_75b 463 chr3L 7285460 7285470 chr3L 7285538 7285548 4 78 0.0 2.0 1.0 2.0 88 chr3L 7285460 intron unc-13-4A - chr3L 7285504 intron unc-13-4A - chr3L 7285548 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-306_75b 464 chr3L 7308198 7308220 chr3L 7308272 7308296 6 76 1.5 1.5 1.5 2.4 98 chr3L 7308198 intron unc-13-4A - chr3L 7308247 intron unc-13-4A - chr3L 7308296 intron unc-13-4A - chr3L_6_7305001 chr3L_7305001 RAL-306_75b 465 chr3L 7328943 7328971 chr3L 7329024 7329052 8 81 0.0 1.0 0.5 5.3 109 chr3L 7328943 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7328998 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329052 intergenic CG42307 +,mus312 +,CG8602 - chr3L_8_7325001 chr3L_7325001 RAL-306_75b 466 chr3L 7377324 7377340 chr3L 7380429 7380445 297 4 3105 2.0 1.5 1.8 1.4 3121 chr3L 7377324 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380445 intron SMSr - chr3L_4_7375001 chr3L_7375001 RAL-306_75b 467 chr3L 7498777 7498782 chr3L 7503554 7503559 F-element 6 4777 3.5 1.5 2.5 1.7 4782 chr3L 7498777 5` UTR CG8539 - chr3L 7501168 intergenic not near genes chr3L 7503559 intergenic not near genes chr3L_6_7500001 chr3L_7500001 RAL-306_75b 468 chr3L 7591148 7591182 chr3L 7591237 7591272 6 90 0.5 1.5 1.0 3.0 124 chr3L 7591148 intergenic CG7716 - chr3L 7591210 intergenic CG7716 - chr3L 7591272 intergenic CG7716 - chr3L_6_7590001 chr3L_7590001 RAL-306_75b 469 chr3L 7617698 7617700 chr3L 7617807 7617809 5 109 3.5 0.0 1.8 1.8 111 chr3L 7617698 intron CG33275 + chr3L 7617754 intron CG33275 + chr3L 7617809 intron CG33275 + chr3L_5_7615001 chr3L_7615001 RAL-306_75b 470 chr3L 7727152 7727177 chr3L 7727233 7727256 10 81 1.0 1.0 1.0 5.0 104 chr3L 7727152 intron CG32373 + chr3L 7727204 intron CG32373 + chr3L 7727256 intron CG32373 + chr3L_10_7725001 chr3L_7725001 RAL-306_75b 471 chr3L 7916837 7916854 chr3L 7926008 7926025 roo 4 9171 0.5 0.0 0.2 3.3 9188 chr3L 7916837 3` UTR syd - chr3L 7921431 intron syd - chr3L 7926025 3` UTR syd - chr3L_4_7920001 chr3L_7920001 RAL-306_75b 472 chr3L 7985374 7985393 chr3L 7987703 7987722 NOF 4 2328 0.5 1.0 0.8 2.2 2348 chr3L 7985374 intron nmo + chr3L 7986548 intron nmo + chr3L 7987722 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-306_75b 473 chr3L 8219556 8219591 chr3L 8219847 8219881 6 290 1.0 1.0 1.0 3.0 325 chr3L 8219556 intergenic not near genes chr3L 8219718 intergenic not near genes chr3L 8219881 intergenic not near genes chr3L_6_8215001 chr3L_8215001 RAL-306_75b 474 chr3L 8295797 8295825 chr3L 8295955 8295983 7 158 2.0 1.5 1.8 2.5 186 chr3L 8295797 intergenic CG7201 - chr3L 8295890 intergenic not near genes chr3L 8295983 intergenic not near genes chr3L_7_8295001 chr3L_8295001 RAL-306_75b 475 chr3L 8396112 8396141 chr3L 8396190 8396219 6 78 0.5 2.5 1.5 2.4 107 chr3L 8396112 5` UTR CG7120 + chr3L 8396166 5` UTR CG7120 + chr3L 8396219 intron CG7120 + chr3L_6_8395001 chr3L_8395001 RAL-306_75b 476 chr3L 8481776 8481806 chr3L 8490932 8490964 roo 5 9158 0.0 0.0 0.0 5.0 9188 chr3L 8481776 intron CG43163 - chr3L 8486370 intron CG43163 - chr3L 8490964 intron CG43163 - chr3L_5_8485001 chr3L_8485001 RAL-306_75b 477 chr3L 8839735 8839747 chr3L 8839812 8839827 7 79 0.5 1.0 0.8 3.9 92 chr3L 8839735 intron dally + chr3L 8839781 intron dally + chr3L 8839827 intron dally + chr3L_7_8835001 chr3L_8835001 RAL-306_75b 478 chr3L 9003945 9003954 chr3L 9004030 9004036 6 84 0.0 1.0 0.5 4.0 91 chr3L 9003945 intergenic not near genes chr3L 9003990 intergenic not near genes chr3L 9004036 intergenic not near genes chr3L_6_9000001 chr3L_9000001 RAL-306_75b 479 chr3L 9067320 9067340 chr3L 9067399 9067419 11 79 3.5 2.0 2.8 2.9 99 chr3L 9067320 3` UTR CG4911 - chr3L 9067370 3` UTR CG4911 - chr3L 9067419 3` UTR CG4911 - chr3L_11_9065001 chr3L_9065001 RAL-306_75b 480 chr3L 9260549 9260576 chr3L 9260634 9260665 6 87 0.5 3.5 2.0 2.0 116 chr3L 9260549 intron GluRIB + chr3L 9260607 intron GluRIB + chr3L 9260665 intron GluRIB + chr3L_6_9260001 chr3L_9260001 RAL-306_75b 481 chr3L 9344198 9344208 chr3L 9344276 9344286 4 78 0.0 1.5 0.8 2.2 88 chr3L 9344198 intron PGRP-LC + chr3L 9344242 intron PGRP-LC + chr3L 9344286 intron PGRP-LC + chr3L_4_9340001 chr3L_9340001 RAL-306_75b 482 chr3L 9571905 9571939 chr3L 9572253 9572287 jockey 9 348 1.5 3.0 2.2 2.8 382 chr3L 9571905 intron CG42673 + chr3L 9572096 intron CG42673 + chr3L 9572287 intron CG42673 + chr3L_9_9570001 chr3L_9570001 RAL-306_75b 483 chr3L 9629750 9629753 chr3L 9629826 9629829 4 76 2.0 2.5 2.2 1.2 79 chr3L 9629750 intron CG8336 + chr3L 9629790 intron CG8336 + chr3L 9629829 intron CG8336 + chr3L_4_9625001 chr3L_9625001 RAL-306_75b 484 chr3L 9715599 9715626 chr3L 9715675 9715703 4 76 1.0 1.0 1.0 2.0 104 chr3L 9715599 intron vsg + chr3L 9715651 intron vsg + chr3L 9715703 intron vsg + chr3L_4_9715001 chr3L_9715001 RAL-306_75b 485 chr3L 9758728 9758750 chr3L 9758812 9758833 8 84 0.0 3.5 1.8 2.9 105 chr3L 9758728 intron CG42268 - chr3L 9758780 intron CG42268 - chr3L 9758833 intron CG42268 - chr3L_8_9755001 chr3L_9755001 RAL-306_75b 486 chr3L 9918884 9918907 chr3L 9918978 9919002 4 95 0.5 0.0 0.2 3.3 118 chr3L 9918884 intron CG34356 + chr3L 9918943 intron CG34356 + chr3L 9919002 intron CG34356 + chr3L_4_9915001 chr3L_9915001 RAL-306_75b 487 chr3L 9929673 9929680 chr3L 9938453 9938460 roo 5 8780 5.5 1.5 3.5 1.1 8787 chr3L 9929673 intron CG34356 + chr3L 9934066 intron CG34356 + chr3L 9938460 intron CG34356 + chr3L_5_9930001 chr3L_9930001 RAL-306_75b 488 chr3L 10032552 10032567 chr3L 10032639 10032654 4 87 0.0 1.0 0.5 2.7 102 chr3L 10032552 intron dpr6 + chr3L 10032603 intron dpr6 + chr3L 10032654 intron dpr6 + chr3L_4_10030001 chr3L_10030001 RAL-306_75b 489 chr3L 10035217 10035233 chr3L 10035303 10035320 6 86 0.0 1.5 0.8 3.3 103 chr3L 10035217 intron dpr6 + chr3L 10035268 intron dpr6 + chr3L 10035320 intron dpr6 + chr3L_6_10035001 chr3L_10035001 RAL-306_75b 490 chr3L 10298676 10298694 chr3L 10298763 10298781 7 87 1.0 0.0 0.5 4.7 105 chr3L 10298676 intergenic not near genes chr3L 10298728 intergenic not near genes chr3L 10298781 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-306_75b 491 chr3L 10417576 10417603 chr3L 10417653 10417680 9 77 1.5 2.0 1.8 3.2 104 chr3L 10417576 intergenic not near genes chr3L 10417628 intergenic not near genes chr3L 10417680 intergenic not near genes chr3L_9_10415001 chr3L_10415001 RAL-306_75b 492 chr3L 10458704 10458723 chr3L 10458781 10458800 4 77 1.0 4.0 2.5 1.1 96 chr3L 10458704 intergenic Gem3 - chr3L 10458752 intergenic Gem3 - chr3L 10458800 intergenic Gem3 - chr3L_4_10455001 chr3L_10455001 RAL-306_75b 493 chr3L 10509486 10509514 chr3L 10509615 10509643 9 128 0.0 0.5 0.2 7.5 157 chr3L 10509486 intron A2bp1 + chr3L 10509564 intron A2bp1 + chr3L 10509643 intron A2bp1 + chr3L_9_10505001 chr3L_10505001 RAL-306_75b 494 chr3L 10752330 10752344 chr3L 10752407 10752420 4 77 1.5 0.5 1.0 2.0 90 chr3L 10752330 intergenic not near genes chr3L 10752375 intergenic not near genes chr3L 10752420 intergenic not near genes chr3L_4_10750001 chr3L_10750001 RAL-306_75b 495 chr3L 10912146 10912165 chr3L 10912246 10912266 4 101 2.0 1.5 1.8 1.4 120 chr3L 10912146 intergenic not near genes chr3L 10912206 intergenic not near genes chr3L 10912266 intergenic not near genes chr3L_4_10910001 chr3L_10910001 RAL-306_75b 496 chr3L 10958218 10958233 chr3L 10958300 10958315 5 82 0.5 0.0 0.2 4.2 97 chr3L 10958218 intergenic not near genes chr3L 10958266 intergenic not near genes chr3L 10958315 intergenic not near genes chr3L_5_10955001 chr3L_10955001 RAL-306_75b 497 chr3L 11087062 11087064 chr3L 11088850 11088850 S-element 6 1787 1.0 0.5 0.8 3.3 1788 chr3L 11087062 intron JIL-1 - chr3L 11087956 intron JIL-1 - chr3L 11088850 intron JIL-1 - chr3L_6_11085001 chr3L_11085001 RAL-306_75b 498 chr3L 11224555 11224571 chr3L 11224677 11224693 5 122 1.5 1.5 1.5 2.0 138 chr3L 11224555 intron CG42671 + chr3L 11224624 intron CG42671 + chr3L 11224693 intron CG42671 + chr3L_5_11220001 chr3L_11220001 RAL-306_75b 499 chr3L 11264468 11264497 chr3L 11271420 11271449 17.6 4 6952 1.5 1.0 1.2 1.8 6981 chr3L 11264468 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271449 intergenic not near genes chr3L_4_11265001 chr3L_11265001 RAL-306_75b 500 chr3L 11290631 11290656 chr3L 11290954 11290979 5 323 1.5 0.5 1.0 2.5 348 chr3L 11290631 intron CG6175 - chr3L 11290805 intron CG6175 - chr3L 11290979 intron CG6175 - chr3L_5_11290001 chr3L_11290001 RAL-306_75b 501 chr3L 11314759 11314778 chr3L 11315976 11315995 4 1216 1.0 0.5 0.8 2.2 1236 chr3L 11314759 intergenic not near genes chr3L 11315377 5` UTR CR44361 + chr3L 11315995 5` UTR CR44361 + chr3L_4_11315001 chr3L_11315001 RAL-306_75b 502 chr3L 11493158 11493186 chr3L 11493240 11493268 6 82 1.5 0.5 1.0 3.0 110 chr3L 11493158 intron chrb + chr3L 11493213 intron chrb + chr3L 11493268 intron chrb + chr3L_6_11490001 chr3L_11490001 RAL-306_75b 503 chr3L 11548853 11548880 chr3L 11548938 11548967 8 87 1.0 0.5 0.8 4.4 114 chr3L 11548853 intron Mob2 - chr3L 11548910 intron Mob2 - chr3L 11548967 intron Mob2 - chr3L_8_11545001 chr3L_11545001 RAL-306_75b 504 chr3L 11864563 11864582 chr3L 11865857 11865877 pogo 5 1294 2.0 4.0 3.0 1.2 1314 chr3L 11864563 intron CG44837 - chr3L 11865220 intron CG44837 - chr3L 11865877 intron CG44837 - chr3L_5_11865001 chr3L_11865001 RAL-306_75b 505 chr3L 12013916 12013931 chr3L 12014007 12014019 4 90 1.5 0.5 1.0 2.0 103 chr3L 12013916 intron rols - chr3L 12013968 intron rols - chr3L 12014019 intron rols - chr3L_4_12010001 chr3L_12010001 RAL-306_75b 506 chr3L 12369556 12369563 chr3L 12369646 12369653 4 90 0.5 2.5 1.5 1.6 97 chr3L 12369556 intron Ncc69 - chr3L 12369604 intron Ncc69 - chr3L 12369653 intron Ncc69 - chr3L_4_12365001 chr3L_12365001 RAL-306_75b 507 chr3L 12578051 12578071 chr3L 12578138 12578159 4 88 0.0 1.5 0.8 2.2 108 chr3L 12578051 intergenic not near genes chr3L 12578105 intergenic not near genes chr3L 12578159 intergenic not near genes chr3L_4_12575001 chr3L_12575001 RAL-306_75b 508 chr3L 12587349 12587371 chr3L 12587432 12587454 4 83 1.0 0.0 0.5 2.7 105 chr3L 12587349 intron ara + chr3L 12587402 intron ara + chr3L 12587454 intron ara + chr3L_4_12585001 chr3L_12585001 RAL-306_75b 509 chr3L 12610995 12611021 chr3L 12611241 12611267 6 246 0.5 1.5 1.0 3.0 272 chr3L 12610995 intron caup + chr3L 12611131 intron caup + chr3L 12611267 intron caup + chr3L_6_12610001 chr3L_12610001 RAL-306_75b 510 chr3L 12647963 12647963 chr3L 12648038 12648039 4 76 3.0 0.0 1.5 1.6 76 chr3L 12647963 5` UTR CR32111 + chr3L 12648001 5` UTR CR32111 + chr3L 12648039 5` UTR CR32111 + chr3L_4_12645001 chr3L_12645001 RAL-306_75b 511 chr3L 12720327 12720341 chr3L 12720412 12720426 4 84 3.5 0.0 1.8 1.4 99 chr3L 12720327 intergenic not near genes chr3L 12720376 intergenic not near genes chr3L 12720426 intergenic not near genes chr3L_4_12720001 chr3L_12720001 RAL-306_75b 512 chr3L 12868047 12868056 chr3L 12868131 12868141 7 85 1.0 0.5 0.8 3.9 94 chr3L 12868047 intergenic not near genes chr3L 12868094 intergenic not near genes chr3L 12868141 intergenic not near genes chr3L_7_12865001 chr3L_12865001 RAL-306_75b 513 chr3L 12957793 12957817 chr3L 12962275 12962299 copia 4 4481 1.0 1.5 1.2 1.8 4506 chr3L 12957793 intergenic not near genes chr3L 12960046 intergenic not near genes chr3L 12962299 intergenic not near genes chr3L_4_12960001 chr3L_12960001 RAL-306_75b 514 chr3L 12978318 12978333 chr3L 12978415 12978429 6 97 2.0 0.0 1.0 3.0 111 chr3L 12978318 intergenic not near genes chr3L 12978374 intergenic not near genes chr3L 12978429 intergenic not near genes chr3L_6_12975001 chr3L_12975001 RAL-306_75b 515 chr3L 13029532 13029551 chr3L 13029612 13029631 4 80 1.5 1.0 1.2 1.8 99 chr3L 13029532 intron CG17672 + chr3L 13029582 intron CG17672 + chr3L 13029631 intron CG17672 + chr3L_4_13025001 chr3L_13025001 RAL-306_75b 516 chr3L 13050569 13050595 chr3L 13050648 13050674 6 79 0.5 1.0 0.8 3.3 105 chr3L 13050569 intergenic not near genes chr3L 13050622 intergenic not near genes chr3L 13050674 intergenic not near genes chr3L_6_13050001 chr3L_13050001 RAL-306_75b 517 chr3L 13069569 13069585 chr3L 13069648 13069664 15 78 1.5 3.0 2.2 4.7 95 chr3L 13069569 intergenic not near genes chr3L 13069616 intergenic not near genes chr3L 13069664 intergenic not near genes chr3L_15_13065001 chr3L_13065001 RAL-306_75b 518 chr3L 13311799 13311817 chr3L 13311877 13311895 4 78 0.5 3.0 1.8 1.4 96 chr3L 13311799 intergenic not near genes chr3L 13311847 intergenic not near genes chr3L 13311895 intergenic not near genes chr3L_4_13310001 chr3L_13310001 RAL-306_75b 519 chr3L 13330833 13330858 chr3L 13330927 13330952 5 94 0.5 0.0 0.2 4.2 119 chr3L 13330833 intergenic not near genes chr3L 13330892 intergenic not near genes chr3L 13330952 intergenic not near genes chr3L_5_13330001 chr3L_13330001 RAL-306_75b 520 chr3L 3302524 3302607 chr3L 13411442 13411543 4 10108927 13.0 6.5 9.8 0.4 10109019 chr3L 3302524 intron CG14968 - chr3L 8357034 exon Idh - chr3L 13411543 exon CG10222 - chr3L_4_8355001 chr3L_8355001 RAL-306_75b 521 chr3L 13438470 13438494 chr3L 13438543 13438570 8 75 0.5 1.5 1.0 4.0 100 chr3L 13438470 exon CG10725 + chr3L 13438520 exon CG10725 + chr3L 13438570 exon CG10725 + chr3L_8_13435001 chr3L_13435001 RAL-306_75b 522 chr3L 13525154 13525190 chr3L 13532950 13532986 roo 5 7796 1.5 1.5 1.5 2.0 7832 chr3L 13525154 intergenic not near genes chr3L 13529070 intergenic not near genes chr3L 13532986 intergenic not near genes chr3L_5_13525001 chr3L_13525001 RAL-306_75b 523 chr3L 13665576 13665595 chr3L 13665663 13665682 6 86 0.5 1.0 0.8 3.3 106 chr3L 13665576 intron bru-3 - chr3L 13665629 intron bru-3 - chr3L 13665682 intron bru-3 - chr3L_6_13665001 chr3L_13665001 RAL-306_75b 524 chr3L 14092738 14092758 chr3L 14092821 14092841 4 83 0.5 0.0 0.2 3.3 103 chr3L 14092738 intergenic not near genes chr3L 14092790 intergenic not near genes chr3L 14092841 intergenic not near genes chr3L_4_14090001 chr3L_14090001 RAL-306_75b 525 chr3L 14110597 14110620 chr3L 14110679 14110702 6 82 0.5 0.5 0.5 4.0 105 chr3L 14110597 intergenic not near genes chr3L 14110650 intergenic not near genes chr3L 14110702 intergenic not near genes chr3L_6_14110001 chr3L_14110001 RAL-306_75b 526 chr3L 14119013 14119044 chr3L 14119109 14119140 5 96 5.0 0.0 2.5 1.4 127 chr3L 14119013 intron Sox21b - chr3L 14119076 intron Sox21b - chr3L 14119140 intron Sox21b - chr3L_5_14115001 chr3L_14115001 RAL-306_75b 527 chr3L 14199347 14199359 chr3L 14199438 14199450 4 90 2.0 1.5 1.8 1.4 103 chr3L 14199347 intron nuf + chr3L 14199398 intron nuf + chr3L 14199450 intron nuf + chr3L_4_14195001 chr3L_14195001 RAL-306_75b 528 chr3L 14211451 14211466 chr3L 14211529 14211544 4 78 0.5 3.0 1.8 1.4 93 chr3L 14211451 intron nuf + chr3L 14211498 intron nuf + chr3L 14211544 intron nuf + chr3L_4_14210001 chr3L_14210001 RAL-306_75b 529 chr3L 14245568 14245582 chr3L 14245662 14245676 1360 7 94 3.0 2.0 2.5 2.0 108 chr3L 14245568 3` UTR CR44561 - chr3L 14245622 3` UTR CR44561 - chr3L 14245676 3` UTR CR44561 - chr3L_7_14245001 chr3L_14245001 RAL-306_75b 530 chr3L 14302997 14303000 chr3L 14303080 14303085 6 84 1.5 0.5 1.0 3.0 88 chr3L 14302997 intron fz + chr3L 14303041 intron fz + chr3L 14303085 intron fz + chr3L_6_14300001 chr3L_14300001 RAL-306_75b 531 chr3L 14462884 14462906 chr3L 14462972 14462994 8 88 0.0 0.5 0.2 6.7 110 chr3L 14462884 intron bbg - chr3L 14462939 intron bbg - chr3L 14462994 intron bbg - chr3L_8_14460001 chr3L_14460001 RAL-306_75b 532 chr3L 14468442 14468477 chr3L 14473648 14473681 copia 5 5206 1.0 2.0 1.5 2.0 5239 chr3L 14468442 intron bbg - chr3L 14471062 intron bbg - chr3L 14473681 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-306_75b 533 chr3L 14961881 14961911 chr3L 14962231 14962261 5 350 0.5 0.5 0.5 3.3 380 chr3L 14961881 intergenic not near genes chr3L 14962071 intergenic not near genes chr3L 14962261 intergenic not near genes chr3L_5_14960001 chr3L_14960001 RAL-306_75b 534 chr3L 15261720 15261725 chr3L 22908066 22908067 5 7646343 0.5 5.5 3.0 1.2 7646347 chr3L 15261720 intergenic not near genes chr3L 19084894 intron Mkp3 - chr3L 22908067 intergenic not near genes chr3L_5_19080001 chr3L_19080001 RAL-306_75b 535 chr3L 15335475 15335490 chr3L 15335597 15335612 4 122 1.5 0.5 1.0 2.0 137 chr3L 15335475 intron CR43992 + chr3L 15335544 intron CR43992 + chr3L 15335612 intron CR43992 + chr3L_4_15335001 chr3L_15335001 RAL-306_75b 536 chr3L 15554924 15554937 chr3L 15556711 15556724 S-element 4 1787 2.0 2.0 2.0 1.3 1800 chr3L 15554924 intron AGO2 + chr3L 15555824 intron AGO2 + chr3L 15556724 intron AGO2 + chr3L_4_15555001 chr3L_15555001 RAL-306_75b 537 chr3L 15651186 15651197 chr3L 15651268 15651280 6 82 1.5 2.0 1.8 2.1 94 chr3L 15651186 exon CG43084 + chr3L 15651233 exon CG43084 + chr3L 15651280 exon CG43084 + chr3L_6_15650001 chr3L_15650001 RAL-306_75b 538 chr3L 15756880 15756910 chr3L 15756963 15756993 8 83 0.5 0.0 0.2 6.7 113 chr3L 15756880 intergenic not near genes chr3L 15756936 intergenic not near genes chr3L 15756993 intergenic not near genes chr3L_8_15755001 chr3L_15755001 RAL-306_75b 539 chr3L 15918118 15918132 chr3L 15918214 15918228 5 96 1.5 1.0 1.2 2.3 110 chr3L 15918118 intron sff - chr3L 15918173 intron sff - chr3L 15918228 intron sff - chr3L_5_15915001 chr3L_15915001 RAL-306_75b 540 chr3L 15929194 15929226 chr3L 15938341 15938373 roo 4 9147 0.5 2.0 1.2 1.8 9179 chr3L 15929194 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938373 intron Pka-C3 - chr3L_4_15930001 chr3L_15930001 RAL-306_75b 541 chr3L 16051330 16051344 chr3L 16051415 16051430 6 85 2.0 2.0 2.0 2.0 100 chr3L 16051330 intergenic th - chr3L 16051380 intergenic th - chr3L 16051430 intergenic th - chr3L_6_16050001 chr3L_16050001 RAL-306_75b 542 chr3L 16162612 16162625 chr3L 16162695 16162709 7 84 1.0 1.0 1.0 3.5 97 chr3L 16162612 intron CG5151 - chr3L 16162660 intron CG5151 - chr3L 16162709 intron CG5151 - chr3L_7_16160001 chr3L_16160001 RAL-306_75b 543 chr3L 16162792 16162829 chr3L 16163097 16163135 8 305 2.5 0.5 1.5 3.2 343 chr3L 16162792 intron CG5151 - chr3L 16162964 intron CG5151 - chr3L 16163135 intron CG5151 - chr3L_8_16160001 chr3L_16160001 RAL-306_75b 544 chr3L 16184119 16184127 chr3L 16188937 16188946 X-element 6 4819 1.5 1.0 1.2 2.7 4827 chr3L 16184119 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188946 intergenic not near genes chr3L_6_16185001 chr3L_16185001 RAL-306_75b 545 chr3L 16212828 16212843 chr3L 16212918 16212934 6 91 1.5 1.0 1.2 2.7 106 chr3L 16212828 intergenic CG13073 - chr3L 16212881 intergenic CG13073 - chr3L 16212934 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-306_75b 546 chr3L 16360886 16360911 chr3L 16360961 16360989 4 77 2.5 2.5 2.5 1.1 103 chr3L 16360886 intron CG45057 - chr3L 16360938 intron CG45057 - chr3L 16360989 intron CG45057 - chr3L_4_16360001 chr3L_16360001 RAL-306_75b 547 chr3L 16443849 16443867 chr3L 16446187 16446207 Doc 8 2340 2.0 0.5 1.2 3.6 2358 chr3L 16443849 intron,intron CG33158 +,dsx-c73A - chr3L 16445028 intron,intron CG33158 +,dsx-c73A - chr3L 16446207 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-306_75b 548 chr3L 16457533 16457557 chr3L 16457626 16457649 6 94 1.0 0.0 0.5 4.0 116 chr3L 16457533 intron CG33158 + chr3L 16457591 intron CG33158 + chr3L 16457649 intron CG33158 + chr3L_6_16455001 chr3L_16455001 RAL-306_75b 549 chr3L 16493973 16493987 chr3L 16494490 16494504 jockey 4 517 2.5 0.0 1.2 1.8 531 chr3L 16493973 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494238 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494504 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_4_16490001 chr3L_16490001 RAL-306_75b 550 chr3L 16537851 16537874 chr3L 16537938 16537961 5 87 0.5 2.0 1.2 2.3 110 chr3L 16537851 intron CG43373 - chr3L 16537906 intron CG43373 - chr3L 16537961 intron CG43373 - chr3L_5_16535001 chr3L_16535001 RAL-306_75b 551 chr3L 16540055 16540088 chr3L 16540143 16540173 8 88 0.0 1.5 0.8 4.4 118 chr3L 16540055 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540173 intron CG43373 - chr3L_8_16540001 chr3L_16540001 RAL-306_75b 552 chr3L 16563235 16563255 chr3L 16563316 16563334 4 80 0.5 0.0 0.2 3.3 99 chr3L 16563235 intergenic Mipp1 - chr3L 16563284 intergenic Mipp1 - chr3L 16563334 intergenic Mipp1 - chr3L_4_16560001 chr3L_16560001 RAL-306_75b 553 chr3L 16581775 16581791 chr3L 16582139 16582154 7 363 0.5 0.5 0.5 4.7 379 chr3L 16581775 5` UTR CR43727 + chr3L 16581964 5` UTR CR43727 + chr3L 16582154 5` UTR CR43727 + chr3L_7_16580001 chr3L_16580001 RAL-306_75b 554 chr3L 16867552 16867563 chr3L 16867630 16867637 4 77 0.0 0.5 0.2 3.3 85 chr3L 16867552 intron Lmpt + chr3L 16867594 intron Lmpt + chr3L 16867637 intron Lmpt + chr3L_4_16865001 chr3L_16865001 RAL-306_75b 555 chr3L 16873339 16873362 chr3L 16873444 16873467 4 105 2.0 1.0 1.5 1.6 128 chr3L 16873339 intron Lmpt + chr3L 16873403 intron Lmpt + chr3L 16873467 intron Lmpt + chr3L_4_16870001 chr3L_16870001 RAL-306_75b 556 chr3L 16894967 16894992 chr3L 16895052 16895077 5 85 1.0 2.0 1.5 2.0 110 chr3L 16894967 intron Lmpt + chr3L 16895022 intron Lmpt + chr3L 16895077 intron Lmpt + chr3L_5_16895001 chr3L_16895001 RAL-306_75b 557 chr3L 16941402 16941411 chr3L 16941503 16941512 4 101 2.5 0.0 1.2 1.8 110 chr3L 16941402 intron Cpr73D - chr3L 16941457 intron Cpr73D - chr3L 16941512 intron Cpr73D - chr3L_4_16940001 chr3L_16940001 RAL-306_75b 558 chr3L 16945731 16945758 chr3L 16954882 16954911 roo 7 9152 2.5 0.0 1.2 3.2 9180 chr3L 16945731 exon Obp73a + chr3L 16950321 intergenic not near genes chr3L 16954911 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-306_75b 559 chr3L 17026789 17026811 chr3L 17026870 17026892 6 81 2.0 3.5 2.8 1.6 103 chr3L 17026789 exon Fit2 + chr3L 17026840 3` UTR Fit2 + chr3L 17026892 3` UTR Fit2 + chr3L_6_17025001 chr3L_17025001 RAL-306_75b 560 chr3L 17027169 17027189 chr3L 17027261 17027281 4 92 1.0 2.0 1.5 1.6 112 chr3L 17027169 intergenic Fit2 +,CG7730 + chr3L 17027225 intergenic Fit2 +,CG7730 + chr3L 17027281 intergenic Fit2 +,CG7730 + chr3L_4_17025001 chr3L_17025001 RAL-306_75b 561 chr3L 17034932 17034962 chr3L 17035120 17035150 G2 7 188 1.0 2.0 1.5 2.8 218 chr3L 17034932 intergenic not near genes chr3L 17035041 intergenic not near genes chr3L 17035150 intergenic not near genes chr3L_7_17035001 chr3L_17035001 RAL-306_75b 562 chr3L 17107348 17107376 chr3L 17107437 17107465 4 89 1.5 0.5 1.0 2.0 117 chr3L 17107348 intron Rbp6 - chr3L 17107406 intron Rbp6 - chr3L 17107465 intron Rbp6 - chr3L_4_17105001 chr3L_17105001 RAL-306_75b 563 chr3L 17184520 17184541 chr3L 17184963 17184986 5 444 0.0 3.5 1.8 1.8 466 chr3L 17184520 intron Rbp6 - chr3L 17184753 intron Rbp6 - chr3L 17184986 intron Rbp6 - chr3L_5_17180001 chr3L_17180001 RAL-306_75b 564 chr3L 17194444 17194445 chr3L 17194530 17194531 4 86 2.0 4.0 3.0 1.0 87 chr3L 17194444 intron Rbp6 - chr3L 17194488 intron Rbp6 - chr3L 17194531 intron Rbp6 - chr3L_4_17190001 chr3L_17190001 RAL-306_75b 565 chr3L 17265310 17265319 chr3L 17265389 17265396 6 79 2.5 3.0 2.8 1.6 86 chr3L 17265310 intergenic CG13723 + chr3L 17265353 intergenic CG13723 + chr3L 17265396 intergenic CG13723 + chr3L_6_17265001 chr3L_17265001 RAL-306_75b 566 chr3L 17321721 17321735 chr3L 17321806 17321820 6 85 3.0 3.0 3.0 1.5 99 chr3L 17321721 intergenic not near genes chr3L 17321770 intergenic not near genes chr3L 17321820 intergenic not near genes chr3L_6_17320001 chr3L_17320001 RAL-306_75b 567 chr3L 17516988 17516999 chr3L 17524546 17524557 412 6 7558 1.5 0.5 1.0 3.0 7569 chr3L 17516988 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524557 3` UTR CG7564 + chr3L_6_17520001 chr3L_17520001 RAL-306_75b 568 chr3L 18026299 18026316 chr3L 18026387 18026404 5 88 1.5 2.0 1.8 1.8 105 chr3L 18026299 intron Eip75B - chr3L 18026352 intron Eip75B - chr3L 18026404 intron Eip75B - chr3L_5_18025001 chr3L_18025001 RAL-306_75b 569 chr3L 18047706 18047723 chr3L 18056762 18056779 roo 5 9056 1.0 0.5 0.8 2.8 9073 chr3L 18047706 intron Eip75B - chr3L 18052242 intron Eip75B - chr3L 18056779 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-306_75b 570 chr3L 18092786 18092798 chr3L 18092899 18092913 4 114 0.0 0.0 0.0 4.0 127 chr3L 18092786 intron CG13698 - chr3L 18092850 intron CG13698 - chr3L 18092913 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-306_75b 571 chr3L 18107617 18107646 chr3L 18107710 18107739 8 93 0.5 1.0 0.8 4.4 122 chr3L 18107617 intergenic mRpS26 +,CG5147 - chr3L 18107678 intergenic CG5147 -,mRpS26 + chr3L 18107739 intergenic CG5147 -,mRpS26 + chr3L_8_18105001 chr3L_18105001 RAL-306_75b 572 chr3L 18207922 18207927 chr3L 18208019 18208024 4 97 0.0 0.0 0.0 4.0 102 chr3L 18207922 intergenic not near genes chr3L 18207973 intergenic not near genes chr3L 18208024 intergenic not near genes chr3L_4_18205001 chr3L_18205001 RAL-306_75b 573 chr3L 18247817 18247818 chr3L 18247895 18247896 5 78 0.0 0.0 0.0 5.0 79 chr3L 18247817 intergenic not near genes chr3L 18247856 intergenic not near genes chr3L 18247896 intergenic not near genes chr3L_5_18245001 chr3L_18245001 RAL-306_75b 574 chr3L 18329400 18329409 chr3L 18329480 18329489 4 80 1.0 1.0 1.0 2.0 89 chr3L 18329400 intergenic not near genes chr3L 18329444 intergenic not near genes chr3L 18329489 intergenic not near genes chr3L_4_18325001 chr3L_18325001 RAL-306_75b 575 chr3L 18528629 18528661 chr3L 18537790 18537822 roo 5 9161 0.0 0.5 0.2 4.2 9193 chr3L 18528629 intergenic not near genes chr3L 18533226 intergenic not near genes chr3L 18537822 intergenic not near genes chr3L_5_18530001 chr3L_18530001 RAL-306_75b 576 chr3L 18638580 18638603 chr3L 18638674 18638697 8 94 0.5 1.0 0.8 4.4 117 chr3L 18638580 intron MYPT-75D + chr3L 18638638 intron MYPT-75D + chr3L 18638697 intron MYPT-75D + chr3L_8_18635001 chr3L_18635001 RAL-306_75b 577 chr3L 18710765 18710780 chr3L 18718717 18718732 Stalker2 6 7952 3.5 1.5 2.5 1.7 7967 chr3L 18710765 intergenic not near genes chr3L 18714748 intergenic not near genes chr3L 18718732 intergenic not near genes chr3L_6_18710001 chr3L_18710001 RAL-306_75b 578 chr3L 18772406 18772428 chr3L 18781087 18781109 roo 5 8681 0.5 0.0 0.2 4.2 8703 chr3L 18772406 intron ftz-f1 - chr3L 18776758 intron ftz-f1 - chr3L 18781109 intron ftz-f1 - chr3L_5_18775001 chr3L_18775001 RAL-306_75b 579 chr3L 18795420 18795435 chr3L 18795503 18795518 7 83 1.0 1.5 1.2 3.2 98 chr3L 18795420 intron ftz-f1 - chr3L 18795469 intron ftz-f1 - chr3L 18795518 intron ftz-f1 - chr3L_7_18795001 chr3L_18795001 RAL-306_75b 580 chr3L 18888254 18888285 chr3L 18888339 18888370 7 85 1.5 0.0 0.8 3.9 116 chr3L 18888254 intron CG3961 - chr3L 18888312 intron CG3961 - chr3L 18888370 intron CG3961 - chr3L_7_18885001 chr3L_18885001 RAL-306_75b 581 chr3L 18933627 18933638 chr3L 18933721 18933730 5 94 4.0 1.0 2.5 1.4 103 chr3L 18933627 intron CG32204 - chr3L 18933678 intron CG32204 - chr3L 18933730 intron CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-306_75b 582 chr3L 19117058 19117069 chr3L 19124505 19124516 mdg1 6 7447 2.5 1.5 2.0 2.0 7458 chr3L 19117058 intron CG14082 - chr3L 19120787 intron CG14082 - chr3L 19124516 intron CG14082 - chr3L_6_19120001 chr3L_19120001 RAL-306_75b 583 chr3L 19127376 19127393 chr3L 19127449 19127469 4 75 1.0 0.0 0.5 2.7 93 chr3L 19127376 intron CG14082 - chr3L 19127422 intron CG14082 - chr3L 19127469 intron CG14082 - chr3L_4_19125001 chr3L_19125001 RAL-306_75b 584 chr3L 19182385 19182407 chr3L 19182466 19182486 4 80 1.0 1.5 1.2 1.8 101 chr3L 19182385 intron fz2 - chr3L 19182436 intron fz2 - chr3L 19182486 intron fz2 - chr3L_4_19180001 chr3L_19180001 RAL-306_75b 585 chr3L 19479355 19479380 chr3L 19479429 19479457 4 76 0.0 2.0 1.0 2.0 102 chr3L 19479355 intergenic not near genes chr3L 19479406 intergenic not near genes chr3L 19479457 intergenic not near genes chr3L_4_19475001 chr3L_19475001 RAL-306_75b 586 chr3L 19703844 19703870 chr3L 19703998 19704024 5 154 1.0 0.0 0.5 3.3 180 chr3L 19703844 intron serp - chr3L 19703934 intron serp - chr3L 19704024 intron serp - chr3L_5_19700001 chr3L_19700001 RAL-306_75b 587 chr3L 19905177 19905205 chr3L 19905506 19905534 9 329 0.5 1.0 0.8 5.0 357 chr3L 19905177 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905356 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905534 intron,intron Mi-2 -,Su(Tpl) - chr3L_9_19905001 chr3L_19905001 RAL-306_75b 588 chr3L 19962946 19962978 chr3L 19963024 19963056 4 78 0.5 1.5 1.0 2.0 110 chr3L 19962946 intron Ac76E + chr3L 19963001 intron Ac76E + chr3L 19963056 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-306_75b 589 chr3L 19981203 19981228 chr3L 19981283 19981308 4 80 3.0 0.5 1.8 1.4 105 chr3L 19981203 intergenic CG17732 + chr3L 19981256 intergenic CG17732 + chr3L 19981308 intergenic CG17732 + chr3L_4_19980001 chr3L_19980001 RAL-306_75b 590 chr3L 19992113 19992121 chr3L 19992189 19992198 4 77 4.0 9.5 6.8 0.5 85 chr3L 19992113 intron,intron CG7646 +,Nca + chr3L 19992156 intron,intron CG7646 +,Nca + chr3L 19992198 intron,intron CG7646 +,Nca + chr3L_4_19990001 chr3L_19990001 RAL-306_75b 591 chr3L 20057571 20057584 chr3L 20057684 20057697 5 113 0.0 2.0 1.0 2.5 126 chr3L 20057571 intergenic not near genes chr3L 20057634 intergenic not near genes chr3L 20057697 intergenic not near genes chr3L_5_20055001 chr3L_20055001 RAL-306_75b 592 chr3L 20081758 20081768 chr3L 20081841 20081851 4 83 0.5 2.5 1.5 1.6 93 chr3L 20081758 intron sNPF-R - chr3L 20081804 intron sNPF-R - chr3L 20081851 intron sNPF-R - chr3L_4_20080001 chr3L_20080001 RAL-306_75b 593 chr3L 20096084 20096119 chr3L 20096188 20096223 6 104 0.5 0.5 0.5 4.0 139 chr3L 20096084 intergenic not near genes chr3L 20096154 intergenic not near genes chr3L 20096223 intergenic not near genes chr3L_6_20095001 chr3L_20095001 RAL-306_75b 594 chr3L 20113485 20113508 chr3L 20113580 20113603 8 95 1.0 3.0 2.0 2.7 118 chr3L 20113485 intergenic not near genes chr3L 20113544 intergenic not near genes chr3L 20113603 intergenic not near genes chr3L_8_20110001 chr3L_20110001 RAL-306_75b 595 chr3L 20113659 20113682 chr3L 20122916 20122939 roo 5 9257 3.0 1.0 2.0 1.7 9280 chr3L 20113659 intergenic not near genes chr3L 20118299 intergenic not near genes chr3L 20122939 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-306_75b 596 chr3L 20143083 20143114 chr3L 20143163 20143194 4 80 2.0 0.5 1.2 1.8 111 chr3L 20143083 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143194 intergenic not near genes chr3L_4_20140001 chr3L_20140001 RAL-306_75b 597 chr3L 20189979 20189998 chr3L 20190083 20190102 4 104 2.5 2.0 2.2 1.2 123 chr3L 20189979 intron CG42674 - chr3L 20190040 intron CG42674 - chr3L 20190102 intron CG42674 - chr3L_4_20190001 chr3L_20190001 RAL-306_75b 598 chr3L 20315668 20315680 chr3L 20315748 20315760 4 80 0.0 3.0 1.5 1.6 92 chr3L 20315668 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315714 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315760 3` UTR,intron alphaSnap +,CR43875 - chr3L_4_20315001 chr3L_20315001 RAL-306_75b 599 chr3L 20462588 20462600 chr3L 20462668 20462681 4 81 1.0 0.0 0.5 2.7 93 chr3L 20462588 intron atk - chr3L 20462634 intron atk - chr3L 20462681 intron atk - chr3L_4_20460001 chr3L_20460001 RAL-306_75b 600 chr3L 20710762 20710793 chr3L 20710839 20710870 6 77 0.0 2.0 1.0 3.0 108 chr3L 20710762 intergenic not near genes chr3L 20710816 intergenic not near genes chr3L 20710870 intergenic not near genes chr3L_6_20710001 chr3L_20710001 RAL-306_75b 601 chr3L 20907887 20907891 chr3L 20907971 20907975 4 84 1.0 4.0 2.5 1.1 88 chr3L 20907887 intergenic not near genes chr3L 20907931 intergenic not near genes chr3L 20907975 intergenic not near genes chr3L_4_20905001 chr3L_20905001 RAL-306_75b 602 chr3L 20945360 20945383 chr3L 20945445 20945468 4 85 4.5 4.5 4.5 0.7 108 chr3L 20945360 intron fng - chr3L 20945414 intron fng - chr3L 20945468 intron fng - chr3L_4_20945001 chr3L_20945001 RAL-306_75b 603 chr3L 21062460 21062488 chr3L 21062556 21062583 6 96 1.0 1.5 1.2 2.7 123 chr3L 21062460 intron siz + chr3L 21062522 intron siz + chr3L 21062583 intron siz + chr3L_6_21060001 chr3L_21060001 RAL-306_75b 604 chr3L 21151862 21151878 chr3L 21156946 21156962 flea 5 5084 0.5 0.5 0.5 3.3 5100 chr3L 21151862 intron Ac78C - chr3L 21154412 intron Ac78C - chr3L 21156962 intron Ac78C - chr3L_5_21150001 chr3L_21150001 RAL-306_75b 605 chr3L 21256545 21256561 chr3L 21256638 21256654 5 92 0.5 4.0 2.2 1.6 109 chr3L 21256545 intron Eip78C + chr3L 21256600 intron Eip78C + chr3L 21256654 intron Eip78C + chr3L_5_21255001 chr3L_21255001 RAL-306_75b 606 chr3L 21306147 21306167 chr3L 21315305 21315326 roo 5 9159 2.5 1.0 1.8 1.8 9179 chr3L 21306147 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310736 intron Pc - chr3L 21315326 3` UTR Pc - chr3L_5_21310001 chr3L_21310001 RAL-306_75b 607 chr3L 21319537 21319558 chr3L 21319627 21319648 4 90 2.5 4.5 3.5 0.9 111 chr3L 21319537 5` UTR Rab26 + chr3L 21319592 5` UTR Rab26 + chr3L 21319648 5` UTR Rab26 + chr3L_4_21315001 chr3L_21315001 RAL-306_75b 608 chr3L 21406995 21407022 chr3L 21407074 21407101 6 79 1.5 1.0 1.2 2.7 106 chr3L 21406995 intron rgn + chr3L 21407048 intron rgn + chr3L 21407101 intron rgn + chr3L_6_21405001 chr3L_21405001 RAL-306_75b 609 chr3L 21415145 21415161 chr3L 21415228 21415244 5 82 0.5 1.5 1.0 2.5 99 chr3L 21415145 intron rgn + chr3L 21415194 intron rgn + chr3L 21415244 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-306_75b 610 chr3L 21415529 21415557 chr3L 21415607 21415635 7 77 2.0 1.5 1.8 2.5 106 chr3L 21415529 intron rgn + chr3L 21415582 intron rgn + chr3L 21415635 intron rgn + chr3L_7_21415001 chr3L_21415001 RAL-306_75b 611 chr3L 21417833 21417851 chr3L 21417914 21417932 5 81 3.0 0.5 1.8 1.8 99 chr3L 21417833 intron rgn + chr3L 21417882 intron rgn + chr3L 21417932 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-306_75b 612 chr3L 21458552 21458568 chr3L 21458667 21458683 9 115 4.0 2.0 3.0 2.2 131 chr3L 21458552 intergenic not near genes chr3L 21458618 intergenic not near genes chr3L 21458683 intergenic not near genes chr3L_9_21455001 chr3L_21455001 RAL-306_75b 613 chr3L 21576184 21576196 chr3L 21576266 21576278 5 83 2.0 6.5 4.2 1.0 94 chr3L 21576184 3` UTR CR43939 - chr3L 21576231 3` UTR CR43939 - chr3L 21576278 3` UTR CR43939 - chr3L_5_21575001 chr3L_21575001 RAL-306_75b 614 chr3L 21692922 21692948 chr3L 21693093 21693119 6 170 3.0 2.0 2.5 1.7 197 chr3L 21692922 3` UTR CG32447 - chr3L 21693020 3` UTR CG32447 - chr3L 21693119 3` UTR CG32447 - chr3L_6_21690001 chr3L_21690001 RAL-306_75b 615 chr3L 21852270 21852276 chr3L 21852363 21852368 4 93 0.0 0.5 0.2 3.3 98 chr3L 21852270 intron mub + chr3L 21852319 intron mub + chr3L 21852368 intron mub + chr3L_4_21850001 chr3L_21850001 RAL-306_75b 616 chr3L 21869458 21869475 chr3L 21869538 21869556 5 80 5.5 0.5 3.0 1.2 98 chr3L 21869458 intron mub + chr3L 21869507 intron mub + chr3L 21869556 intron mub + chr3L_5_21865001 chr3L_21865001 RAL-306_75b 617 chr3L 22328065 22328078 chr3L 22328164 22328177 4 99 0.0 2.5 1.2 1.8 112 chr3L 22328065 intron Ten-m - chr3L 22328121 intron Ten-m - chr3L 22328177 intron Ten-m - chr3L_4_22325001 chr3L_22325001 RAL-306_75b 618 chr3L 22366717 22366721 chr3L 22366795 22366799 4 78 4.5 2.0 3.2 1.0 82 chr3L 22366717 intron Ten-m - chr3L 22366758 intron Ten-m - chr3L 22366799 intron Ten-m - chr3L_4_22365001 chr3L_22365001 RAL-306_75b 619 chr3L 22447196 22447229 chr3L 22447287 22447320 11 91 1.0 2.0 1.5 4.4 124 chr3L 22447196 intergenic not near genes chr3L 22447258 intergenic not near genes chr3L 22447320 intergenic not near genes chr3L_11_22445001 chr3L_22445001 RAL-306_75b 620 chr3L 22522708 22522729 chr3L 22522785 22522806 9 77 0.5 1.5 1.0 4.5 98 chr3L 22522708 intergenic not near genes chr3L 22522757 intergenic not near genes chr3L 22522806 intergenic not near genes chr3L_9_22520001 chr3L_22520001 RAL-306_75b 621 chr3L 22554427 22554436 chr3L 22554502 22554512 7 75 4.5 0.0 2.2 2.2 85 chr3L 22554427 intergenic not near genes chr3L 22554470 intergenic not near genes chr3L 22554512 intergenic not near genes chr3L_7_22550001 chr3L_22550001 RAL-306_75b 622 chr3L 22569580 22569601 chr3L 22569678 22569697 4 97 5.0 1.5 3.2 1.0 117 chr3L 22569580 intergenic not near genes chr3L 22569638 intergenic not near genes chr3L 22569697 intergenic not near genes chr3L_4_22565001 chr3L_22565001 RAL-306_75b 623 chr3L 22577630 22577649 chr3L 22582417 22582437 Doc 9 4787 2.0 4.0 3.0 2.2 4807 chr3L 22577630 intergenic not near genes chr3L 22580034 intergenic not near genes chr3L 22582437 3` UTR CG14459 - chr3L_9_22580001 chr3L_22580001 RAL-306_75b 624 chr3L 22617213 22617221 chr3L 22624664 22624673 blood 5 7452 2.0 3.5 2.8 1.3 7460 chr3L 22617213 intron CG14459 - chr3L 22620943 intron CG14459 - chr3L 22624673 intron CG14459 - chr3L_5_22620001 chr3L_22620001 RAL-306_75b 625 chr3L 22761386 22761414 chr3L 22766820 22766848 Ivk 10 5434 3.5 0.0 1.8 3.6 5462 chr3L 22761386 intron SPoCk + chr3L 22764117 intron SPoCk + chr3L 22766848 intron SPoCk + chr3L_10_22760001 chr3L_22760001 RAL-306_75b 626 chr3L 22855324 22855357 chr3L 22855407 22855440 8 82 1.5 1.5 1.5 3.2 116 chr3L 22855324 exon CG32459 - chr3L 22855382 exon CG32459 - chr3L 22855440 exon CG32459 - chr3L_8_22855001 chr3L_22855001 RAL-306_75b 627 chr3L 22856623 22856640 chr3L 22856909 22856925 4 285 1.0 2.0 1.5 1.6 302 chr3L 22856623 intergenic not near genes chr3L 22856774 intergenic not near genes chr3L 22856925 intergenic not near genes chr3L_4_22855001 chr3L_22855001 RAL-306_75b 628 chr3L 22897200 22897224 chr3L 22897283 22897307 5 83 2.0 1.5 1.8 1.8 107 chr3L 22897200 intergenic not near genes chr3L 22897254 intergenic not near genes chr3L 22897307 intergenic not near genes chr3L_5_22895001 chr3L_22895001 RAL-306_75b 629 chr3L 23941241 23941245 chr3L 26882295 26882299 1360 4 2941054 7.5 0.0 3.8 0.8 2941058 chr3L 23941241 intron CG40470 - chr3L 25411770 intergenic not near genes chr3L 26882299 intergenic not near genes chr3L_4_25410001 chr3L_25410001 RAL-306_75b 630 chr3L 24012420 24012432 chr3L 24020761 24020773 roo 4 8341 3.5 2.0 2.8 1.1 8353 chr3L 24012420 intergenic not near genes chr3L 24016596 intergenic not near genes chr3L 24020773 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-306_75b 631 chr3L 27390688 27390690 chr3L 27390767 27390768 4 78 15.5 10.5 13.0 0.3 80 chr3L 27390688 intron Dbp80 + chr3L 27390728 intron Dbp80 + chr3L 27390768 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-306_75b 632 chr3R 4063822 4063828 chr3R 4069102 4069108 4 5280 1.5 3.5 2.5 1.1 5286 chr3R 4063822 intergenic not near genes chr3R 4066465 intergenic not near genes chr3R 4069108 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-306_75b 633 chr3R 4366760 4366781 chr3R 4375143 4375164 roo 6 8382 4.0 1.5 2.8 1.6 8404 chr3R 4366760 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375164 5` UTR CR44922 + chr3R_6_4370001 chr3R_4370001 RAL-306_75b 634 chr3R 4408422 4408438 chr3R 4412726 4412741 Juan 7 4303 4.5 3.0 3.8 1.5 4319 chr3R 4408422 intron CG32944 - chr3R 4410582 intron CG32944 - chr3R 4412741 intron CG32944 - chr3R_7_4410001 chr3R_4410001 RAL-306_75b 635 chr3R 4581950 4581976 chr3R 4585336 4585362 4 3386 8.0 11.5 9.8 0.4 3412 chr3R 4581950 intergenic not near genes chr3R 4583656 intergenic not near genes chr3R 4585362 3` UTR CR45558 - chr3R_4_4580001 chr3R_4580001 RAL-306_75b 636 chr3R 4609545 4609580 chr3R 4610709 4610744 1360 7 1163 0.0 0.5 0.2 5.8 1199 chr3R 4609545 intergenic not near genes chr3R 4610144 intergenic not near genes chr3R 4610744 intergenic not near genes chr3R_7_4610001 chr3R_4610001 RAL-306_75b 637 chr3R 4739114 4739126 chr3R 4739191 4739203 8 77 2.0 1.0 1.5 3.2 89 chr3R 4739114 intron tacc - chr3R 4739158 intron tacc - chr3R 4739203 intron tacc - chr3R_8_4735001 chr3R_4735001 RAL-306_75b 638 chr3R 4769164 4769187 chr3R 4769241 4769265 6 78 3.0 2.0 2.5 1.7 101 chr3R 4769164 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769265 intron,intron atms +,CG44098 - chr3R_6_4765001 chr3R_4765001 RAL-306_75b 639 chr3R 4966021 4966031 chr3R 4966111 4966121 5 91 3.5 1.5 2.5 1.4 100 chr3R 4966021 intron CG1124 + chr3R 4966071 intron CG1124 + chr3R 4966121 intron CG1124 + chr3R_5_4965001 chr3R_4965001 RAL-306_75b 640 chr3R 4984905 4984912 chr3R 4985009 4985016 6 104 0.0 1.5 0.8 3.3 111 chr3R 4984905 3` UTR CR43424 - chr3R 4984960 3` UTR CR43424 - chr3R 4985016 3` UTR CR43424 - chr3R_6_4980001 chr3R_4980001 RAL-306_75b 641 chr3R 5045843 5045872 chr3R 5052945 5052974 HMS-Beagle 6 7102 3.0 1.0 2.0 2.0 7131 chr3R 5045843 intron CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052974 intergenic CR45588 - chr3R_6_5045001 chr3R_5045001 RAL-306_75b 642 chr3R 5198984 5198993 chr3R 5199068 5199077 4 84 1.0 2.0 1.5 1.6 93 chr3R 5198984 intron cno - chr3R 5199030 intron cno - chr3R 5199077 intron cno - chr3R_4_5195001 chr3R_5195001 RAL-306_75b 643 chr3R 5278093 5278121 chr3R 5278173 5278202 6 81 1.0 1.0 1.0 3.0 109 chr3R 5278093 intron mtd - chr3R 5278148 intron mtd - chr3R 5278202 intron mtd - chr3R_6_5275001 chr3R_5275001 RAL-306_75b 644 chr3R 5437980 5437991 chr3R 5438090 5438099 7 110 0.0 5.5 2.8 1.8 119 chr3R 5437980 intron CG14669 + chr3R 5438040 intron CG14669 + chr3R 5438099 intron CG14669 + chr3R_7_5435001 chr3R_5435001 RAL-306_75b 645 chr3R 5726089 5726120 chr3R 5726251 5726282 5 162 2.5 2.5 2.5 1.4 193 chr3R 5726089 intergenic not near genes chr3R 5726186 intergenic not near genes chr3R 5726282 intergenic not near genes chr3R_5_5725001 chr3R_5725001 RAL-306_75b 646 chr3R 5746028 5746037 chr3R 5746269 5746278 pogo 4 241 1.5 3.0 2.2 1.2 250 chr3R 5746028 3` UTR Madm + chr3R 5746153 3` UTR Madm + chr3R 5746278 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-306_75b 647 chr3R 5747020 5747048 chr3R 5753211 5753239 diver 6 6191 1.5 2.5 2.0 2.0 6219 chr3R 5747020 intergenic Madm + chr3R 5750130 intergenic not near genes chr3R 5753239 intergenic CG2091 - chr3R_6_5750001 chr3R_5750001 RAL-306_75b 648 chr3R 5772395 5772401 chr3R 5772553 5772559 4 158 0.0 3.0 1.5 1.6 164 chr3R 5772395 intron CG2082 - chr3R 5772477 intron CG2082 - chr3R 5772559 intron CG2082 - chr3R_4_5770001 chr3R_5770001 RAL-306_75b 649 chr3R 5822378 5822408 chr3R 5823545 5823573 1360 7 1166 2.5 3.0 2.8 1.8 1195 chr3R 5822378 3` UTR CG2023 - chr3R 5822976 3` UTR CG2023 - chr3R 5823573 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-306_75b 650 chr3R 5893170 5893186 chr3R 5893341 5893358 10 172 3.0 2.0 2.5 2.9 188 chr3R 5893170 intron CG34113 - chr3R 5893264 intron CG34113 - chr3R 5893358 intron CG34113 - chr3R_10_5890001 chr3R_5890001 RAL-306_75b 651 chr3R 5927574 5927592 chr3R 5927814 5927832 pogo 4 240 2.0 3.0 2.5 1.1 258 chr3R 5927574 intron CG34113 - chr3R 5927703 intron CG34113 - chr3R 5927832 intron CG34113 - chr3R_4_5925001 chr3R_5925001 RAL-306_75b 652 chr3R 5988920 5988934 chr3R 5989121 5989135 5 200 1.0 3.0 2.0 1.7 215 chr3R 5988920 intergenic CR44927 + chr3R 5989028 intergenic CR44927 + chr3R 5989135 intergenic CR44927 + chr3R_5_5985001 chr3R_5985001 RAL-306_75b 653 chr3R 6015990 6015994 chr3R 6024491 6024494 Tirant 5 8501 0.0 1.5 0.8 2.8 8504 chr3R 6015990 intergenic not near genes chr3R 6020242 intergenic not near genes chr3R 6024494 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-306_75b 654 chr3R 6061178 6061196 chr3R 6061292 6061312 5 116 11.0 4.5 7.8 0.6 134 chr3R 6061178 intergenic not near genes chr3R 6061245 intergenic not near genes chr3R 6061312 intergenic not near genes chr3R_5_6060001 chr3R_6060001 RAL-306_75b 655 chr3R 6076522 6076546 chr3R 6076624 6076649 4 102 1.5 0.0 0.8 2.2 127 chr3R 6076522 intergenic Or83c - chr3R 6076586 intergenic Or83c - chr3R 6076649 intergenic Or83c - chr3R_4_6075001 chr3R_6075001 RAL-306_75b 656 chr3R 6171160 6171167 chr3R 6171521 6171529 5 362 0.5 2.0 1.2 2.3 369 chr3R 6171160 intergenic not near genes chr3R 6171344 intergenic not near genes chr3R 6171529 intergenic not near genes chr3R_5_6170001 chr3R_6170001 RAL-306_75b 657 chr3R 6175183 6175197 chr3R 6182455 6182469 HMS-Beagle2 5 7272 2.5 0.0 1.2 2.3 7286 chr3R 6175183 intergenic Osi1 + chr3R 6178826 intron CR45194 + chr3R 6182469 intergenic CR45194 + chr3R_5_6175001 chr3R_6175001 RAL-306_75b 658 chr3R 6538204 6538229 chr3R 6538302 6538326 7 97 1.0 0.5 0.8 3.9 122 chr3R 6538204 intron dpr11 - chr3R 6538265 intron dpr11 - chr3R 6538326 exon dpr11 - chr3R_7_6535001 chr3R_6535001 RAL-306_75b 659 chr3R 6550342 6550353 chr3R 6550421 6550434 4 80 0.0 1.0 0.5 2.7 92 chr3R 6550342 intron dpr11 - chr3R 6550388 intron dpr11 - chr3R 6550434 intron dpr11 - chr3R_4_6550001 chr3R_6550001 RAL-306_75b 660 chr3R 6551111 6551134 chr3R 6551205 6551228 4 94 4.0 2.0 3.0 1.0 117 chr3R 6551111 intron dpr11 - chr3R 6551170 intron dpr11 - chr3R 6551228 intron dpr11 - chr3R_4_6550001 chr3R_6550001 RAL-306_75b 661 chr3R 6561956 6561980 chr3R 6562040 6562064 6 84 1.5 1.5 1.5 2.4 108 chr3R 6561956 intron dpr11 - chr3R 6562010 intron dpr11 - chr3R 6562064 intron dpr11 - chr3R_6_6560001 chr3R_6560001 RAL-306_75b 662 chr3R 6780451 6780473 chr3R 6780534 6780556 5 83 2.0 2.0 2.0 1.7 105 chr3R 6780451 intergenic not near genes chr3R 6780504 intergenic not near genes chr3R 6780556 intergenic not near genes chr3R_5_6780001 chr3R_6780001 RAL-306_75b 663 chr3R 6782432 6782470 chr3R 6782511 6782549 6 79 2.0 0.0 1.0 3.0 117 chr3R 6782432 intergenic not near genes chr3R 6782490 intergenic not near genes chr3R 6782549 intergenic not near genes chr3R_6_6780001 chr3R_6780001 RAL-306_75b 664 chr3R 6807265 6807292 chr3R 6807347 6807373 4 82 1.0 0.5 0.8 2.2 108 chr3R 6807265 intergenic not near genes chr3R 6807319 intergenic not near genes chr3R 6807373 intergenic not near genes chr3R_4_6805001 chr3R_6805001 RAL-306_75b 665 chr3R 6828024 6828037 chr3R 6828100 6828113 4 76 2.0 0.0 1.0 2.0 89 chr3R 6828024 intron Scr - chr3R 6828068 intron Scr - chr3R 6828113 intron Scr - chr3R_4_6825001 chr3R_6825001 RAL-306_75b 666 chr3R 7012210 7012234 chr3R 7012288 7012311 5 78 1.0 1.5 1.2 2.3 101 chr3R 7012210 intergenic not near genes chr3R 7012260 intergenic not near genes chr3R 7012311 intergenic not near genes chr3R_5_7010001 chr3R_7010001 RAL-306_75b 667 chr3R 7103934 7103961 chr3R 7104032 7104060 9 98 0.5 1.5 1.0 4.5 126 chr3R 7103934 intron Alh - chr3R 7103997 intron Alh - chr3R 7104060 intron Alh - chr3R_9_7100001 chr3R_7100001 RAL-306_75b 668 chr3R 7206878 7206900 chr3R 7206966 7206989 6 89 1.5 2.5 2.0 2.0 111 chr3R 7206878 intergenic CG1288 - chr3R 7206934 intergenic CG1288 - chr3R 7206989 intergenic CG1288 - chr3R_6_7205001 chr3R_7205001 RAL-306_75b 669 chr3R 7683654 7683670 chr3R 7683953 7683969 8 299 0.0 2.0 1.0 4.0 315 chr3R 7683654 intron Nlg1 + chr3R 7683812 intron Nlg1 + chr3R 7683969 intron Nlg1 + chr3R_8_7680001 chr3R_7680001 RAL-306_75b 670 chr3R 7726163 7726189 chr3R 7726240 7726265 5 77 0.5 1.5 1.0 2.5 102 chr3R 7726163 intergenic not near genes chr3R 7726214 intergenic not near genes chr3R 7726265 intergenic not near genes chr3R_5_7725001 chr3R_7725001 RAL-306_75b 671 chr3R 7838022 7838055 chr3R 7838246 7838279 7 223 0.0 1.5 0.8 3.9 257 chr3R 7838022 intron CG34384 + chr3R 7838150 intron CG34384 + chr3R 7838279 intron CG34384 + chr3R_7_7835001 chr3R_7835001 RAL-306_75b 672 chr3R 7973318 7973347 chr3R 7974380 7974405 1360 11 1062 2.5 3.0 2.8 2.9 1087 chr3R 7973318 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974405 intergenic CD98hc - chr3R_11_7970001 chr3R_7970001 RAL-306_75b 673 chr3R 8094407 8094435 chr3R 8099712 8099740 Transpac 9 5305 0.5 3.0 1.8 3.2 5333 chr3R 8094407 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099740 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-306_75b 674 chr3R 8403010 8403038 chr3R 8412176 8412204 roo 7 9165 1.0 1.0 1.0 3.5 9194 chr3R 8403010 intron CG45263 - chr3R 8407607 intron CG45263 - chr3R 8412204 intron CG45263 - chr3R_7_8405001 chr3R_8405001 RAL-306_75b 675 chr3R 8570480 8570499 chr3R 8575116 8575134 HMS-Beagle 4 4636 1.5 0.5 1.0 2.0 4654 chr3R 8570480 intergenic not near genes chr3R 8572807 intergenic not near genes chr3R 8575134 intergenic not near genes chr3R_4_8570001 chr3R_8570001 RAL-306_75b 676 chr3R 8645916 8645918 chr3R 16713129 16713131 4 8067213 2.0 2.0 2.0 1.3 8067215 chr3R 8645916 intergenic Mkk4 -,Cyp313b1 - chr3R 12679524 exon Cyp313a4 - chr3R 16713131 intron Ubx - chr3R_4_12675001 chr3R_12675001 RAL-306_75b 677 chr3R 8707356 8707381 chr3R 8709797 8709822 jockey 6 2441 3.0 1.5 2.2 1.9 2466 chr3R 8707356 intergenic not near genes chr3R 8708589 intergenic not near genes chr3R 8709822 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-306_75b 678 chr3R 8979896 8979918 chr3R 8979979 8980001 4 83 2.0 3.5 2.8 1.1 105 chr3R 8979896 intergenic not near genes chr3R 8979948 intergenic not near genes chr3R 8980001 intergenic not near genes chr3R_4_8975001 chr3R_8975001 RAL-306_75b 679 chr3R 9036376 9036406 chr3R 9036453 9036484 5 78 2.0 0.5 1.2 2.3 108 chr3R 9036376 intron neur - chr3R 9036430 intron neur - chr3R 9036484 intron neur - chr3R_5_9035001 chr3R_9035001 RAL-306_75b 680 chr3R 9277555 9277574 chr3R 9277670 9277688 7 114 2.5 0.5 1.5 2.8 133 chr3R 9277555 intergenic not near genes chr3R 9277622 intergenic not near genes chr3R 9277688 intergenic not near genes chr3R_7_9275001 chr3R_9275001 RAL-306_75b 681 chr3R 9278782 9278808 chr3R 9284042 9284067 Rt1a 6 5260 2.0 1.5 1.8 2.1 5285 chr3R 9278782 intergenic not near genes chr3R 9281424 intergenic not near genes chr3R 9284067 intergenic not near genes chr3R_6_9280001 chr3R_9280001 RAL-306_75b 682 chr3R 9319569 9319592 chr3R 9320004 9320027 jockey 5 435 2.0 0.0 1.0 2.5 458 chr3R 9319569 intron CG8861 - chr3R 9319798 intron CG8861 - chr3R 9320027 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-306_75b 683 chr3R 9428838 9428844 chr3R 9428916 9428922 4 78 1.0 2.0 1.5 1.6 84 chr3R 9428838 intron ps + chr3R 9428880 intron ps + chr3R 9428922 intron ps + chr3R_4_9425001 chr3R_9425001 RAL-306_75b 684 chr3R 9702267 9702277 chr3R 9702343 9702353 4 76 4.5 1.0 2.8 1.1 86 chr3R 9702267 intron Unc-115a - chr3R 9702310 intron Unc-115a - chr3R 9702353 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-306_75b 685 chr3R 10394082 10394096 chr3R 10394181 10394195 5 99 4.0 2.0 3.0 1.2 113 chr3R 10394082 intron cwo + chr3R 10394138 intron cwo + chr3R 10394195 intron cwo + chr3R_5_10390001 chr3R_10390001 RAL-306_75b 686 chr3R 10593430 10593460 chr3R 10593517 10593541 10 83 0.0 0.0 0.0 10.0 111 chr3R 10593430 intron hth - chr3R 10593486 intron hth - chr3R 10593541 intron hth - chr3R_10_10590001 chr3R_10590001 RAL-306_75b 687 chr3R 10785821 10785835 chr3R 10785900 10785914 4 79 2.0 1.0 1.5 1.6 93 chr3R 10785821 intron Rbp1 + chr3R 10785868 intron Rbp1 + chr3R 10785914 intron Rbp1 + chr3R_4_10785001 chr3R_10785001 RAL-306_75b 688 chr3R 10919684 10919710 chr3R 10919762 10919788 6 78 1.5 1.0 1.2 2.7 104 chr3R 10919684 intergenic not near genes chr3R 10919736 intergenic not near genes chr3R 10919788 intergenic not near genes chr3R_6_10915001 chr3R_10915001 RAL-306_75b 689 chr3R 10920047 10920076 chr3R 10920124 10920154 5 77 1.0 1.5 1.2 2.3 107 chr3R 10920047 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920154 intergenic not near genes chr3R_5_10920001 chr3R_10920001 RAL-306_75b 690 chr3R 11024191 11024199 chr3R 11024287 11024295 8 96 2.0 5.5 3.8 1.7 104 chr3R 11024191 intron CG34114 + chr3R 11024243 intron CG34114 + chr3R 11024295 intron CG34114 + chr3R_8_11020001 chr3R_11020001 RAL-306_75b 691 chr3R 11155047 11155071 chr3R 11155124 11155149 8 78 1.0 2.0 1.5 3.2 102 chr3R 11155047 intron Ugt86Dc + chr3R 11155098 intron Ugt86Dc + chr3R 11155149 intron Ugt86Dc + chr3R_8_11155001 chr3R_11155001 RAL-306_75b 692 chr3R 11379234 11379268 chr3R 11388388 11388423 roo 9 9155 2.5 0.5 1.5 3.6 9189 chr3R 11379234 intron pros + chr3R 11383828 intron pros + chr3R 11388423 intron pros + chr3R_9_11380001 chr3R_11380001 RAL-306_75b 693 chr3R 11518815 11518845 chr3R 11518905 11518933 8 90 1.5 1.5 1.5 3.2 118 chr3R 11518815 intergenic not near genes chr3R 11518874 intergenic not near genes chr3R 11518933 intergenic not near genes chr3R_8_11515001 chr3R_11515001 RAL-306_75b 694 chr3R 11566621 11566643 chr3R 11567056 11567079 6 435 13.0 10.0 11.5 0.5 458 chr3R 11566621 intron,intron fabp -,sea - chr3R 11566850 intron,intron fabp -,sea - chr3R 11567079 intergenic fabp -,sea - chr3R_6_11565001 chr3R_11565001 RAL-306_75b 695 chr3R 11656500 11656530 chr3R 11656580 11656610 8 79 1.5 0.5 1.0 4.0 110 chr3R 11656500 5` UTR CG42327 + chr3R 11656555 5` UTR CG42327 + chr3R 11656610 5` UTR CG42327 + chr3R_8_11655001 chr3R_11655001 RAL-306_75b 696 chr3R 11673887 11673897 chr3R 11674151 11674165 4 265 3.5 7.0 5.2 0.6 278 chr3R 11673887 3` UTR CG42327 + chr3R 11674026 intergenic CG42327 +,CG14715 + chr3R 11674165 intergenic CG14715 +,CG42327 + chr3R_4_11670001 chr3R_11670001 RAL-306_75b 697 chr3R 11689853 11689879 chr3R 11690794 11690820 4 940 0.0 1.0 0.5 2.7 967 chr3R 11689853 exon CG6908 - chr3R 11690336 intergenic CG18765 -,CG6908 - chr3R 11690820 exon CG18765 - chr3R_4_11690001 chr3R_11690001 RAL-306_75b 698 chr3R 11708633 11708660 chr3R 11708841 11708868 7 208 3.0 4.0 3.5 1.6 235 chr3R 11708633 intergenic not near genes chr3R 11708750 intergenic not near genes chr3R 11708868 intergenic not near genes chr3R_7_11705001 chr3R_11705001 RAL-306_75b 699 chr3R 11733744 11733777 chr3R 11733856 11733888 9 111 0.5 0.5 0.5 6.0 144 chr3R 11733744 intergenic not near genes chr3R 11733816 intergenic not near genes chr3R 11733888 intergenic not near genes chr3R_9_11730001 chr3R_11730001 RAL-306_75b 700 chr3R 11811088 11811103 chr3R 11811184 11811199 7 94 1.0 1.0 1.0 3.5 111 chr3R 11811088 5` UTR ClC-a - chr3R 11811144 intron ClC-a - chr3R 11811199 intron ClC-a - chr3R_7_11810001 chr3R_11810001 RAL-306_75b 701 chr3R 11914383 11914383 chr3R 11914466 11914468 5 84 1.5 2.0 1.8 1.8 85 chr3R 11914383 intron Cad87A - chr3R 11914426 intron Cad87A - chr3R 11914468 intron Cad87A - chr3R_5_11910001 chr3R_11910001 RAL-306_75b 702 chr3R 11916432 11916455 chr3R 11916511 11916534 11 79 0.5 2.5 1.5 4.4 102 chr3R 11916432 intron Cad87A - chr3R 11916483 intron Cad87A - chr3R 11916534 intron Cad87A - chr3R_11_11915001 chr3R_11915001 RAL-306_75b 703 chr3R 11919304 11919333 chr3R 11919392 11919421 6 88 1.0 0.5 0.8 3.3 117 chr3R 11919304 intron Cad87A - chr3R 11919362 intron Cad87A - chr3R 11919421 intron Cad87A - chr3R_6_11915001 chr3R_11915001 RAL-306_75b 704 chr3R 11945392 11945406 chr3R 11945490 11945503 6 98 0.5 1.0 0.8 3.3 111 chr3R 11945392 intron Cad87A - chr3R 11945448 intron Cad87A - chr3R 11945503 intron Cad87A - chr3R_6_11945001 chr3R_11945001 RAL-306_75b 705 chr3R 12022893 12022912 chr3R 12025070 12025086 pogo 5 2176 2.0 1.5 1.8 1.8 2193 chr3R 12022893 intergenic not near genes chr3R 12023990 intergenic not near genes chr3R 12025086 intergenic not near genes chr3R_5_12020001 chr3R_12020001 RAL-306_75b 706 chr3R 12029935 12029939 chr3R 12030022 12030026 7 87 2.5 1.0 1.8 2.5 91 chr3R 12029935 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029980 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030026 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_7_12025001 chr3R_12025001 RAL-306_75b 707 chr3R 12081998 12082030 chr3R 12082074 12082102 4 75 1.0 2.0 1.5 1.6 104 chr3R 12081998 intron CG14741 - chr3R 12082050 intron CG14741 - chr3R 12082102 intron CG14741 - chr3R_4_12080001 chr3R_12080001 RAL-306_75b 708 chr3R 12175226 12175238 chr3R 12175306 12175316 4 80 1.5 0.0 0.8 2.2 90 chr3R 12175226 intergenic not near genes chr3R 12175271 intergenic not near genes chr3R 12175316 intergenic not near genes chr3R_4_12175001 chr3R_12175001 RAL-306_75b 709 chr3R 12183199 12183200 chr3R 12183285 12183285 4 86 2.0 4.0 3.0 1.0 86 chr3R 12183199 intergenic not near genes chr3R 12183242 intergenic not near genes chr3R 12183285 intergenic not near genes chr3R_4_12180001 chr3R_12180001 RAL-306_75b 710 chr3R 12524135 12524163 chr3R 12524215 12524243 8 79 2.5 3.0 2.8 2.1 108 chr3R 12524135 intron Octbeta3R - chr3R 12524189 intron Octbeta3R - chr3R 12524243 intron Octbeta3R - chr3R_8_12520001 chr3R_12520001 RAL-306_75b 711 chr3R 12568495 12568528 chr3R 12568575 12568608 12 79 3.0 2.5 2.8 3.2 113 chr3R 12568495 intron Octbeta2R - chr3R 12568552 intron Octbeta2R - chr3R 12568608 intron Octbeta2R - chr3R_12_12565001 chr3R_12565001 RAL-306_75b 712 chr3R 12566712 12566736 chr3R 12570807 12570830 5 4094 13.0 2.0 7.5 0.6 4118 chr3R 12566712 intron Octbeta2R - chr3R 12568771 intron Octbeta2R - chr3R 12570830 intron Octbeta2R - chr3R_5_12565001 chr3R_12565001 RAL-306_75b 713 chr3R 12733484 12733506 chr3R 12733557 12733583 4 76 0.5 1.5 1.0 2.0 99 chr3R 12733484 intergenic not near genes chr3R 12733534 intergenic not near genes chr3R 12733583 intergenic not near genes chr3R_4_12730001 chr3R_12730001 RAL-306_75b 714 chr3R 12739049 12739068 chr3R 12739125 12739144 6 76 1.5 0.0 0.8 3.3 95 chr3R 12739049 intergenic not near genes chr3R 12739096 intergenic not near genes chr3R 12739144 intergenic CG5724 + chr3R_6_12735001 chr3R_12735001 RAL-306_75b 715 chr3R 12763122 12763153 chr3R 12763199 12763230 4 77 0.0 0.5 0.2 3.3 108 chr3R 12763122 intron beat-Vc - chr3R 12763176 intron beat-Vc - chr3R 12763230 intron beat-Vc - chr3R_4_12760001 chr3R_12760001 RAL-306_75b 716 chr3R 12814246 12814262 chr3R 12814316 12814339 6 76 0.0 0.5 0.2 5.0 93 chr3R 12814246 intron CG31345 - chr3R 12814292 intron CG31345 - chr3R 12814339 intron CG31345 - chr3R_6_12810001 chr3R_12810001 RAL-306_75b 717 chr3R 12954801 12954808 chr3R 12954906 12954912 4 104 2.0 1.0 1.5 1.6 111 chr3R 12954801 intron grsm - chr3R 12954856 intron grsm - chr3R 12954912 intron grsm - chr3R_4_12950001 chr3R_12950001 RAL-306_75b 718 chr3R 12972560 12972579 chr3R 12972698 12972718 6 139 1.0 1.0 1.0 3.0 158 chr3R 12972560 intron CG7381 - chr3R 12972639 intron CG7381 - chr3R 12972718 intron CG7381 - chr3R_6_12970001 chr3R_12970001 RAL-306_75b 719 chr3R 13313431 13313453 chr3R 13313530 13313550 7 99 2.0 0.0 1.0 3.5 119 chr3R 13313431 intergenic CG44142 - chr3R 13313490 intergenic CG44142 - chr3R 13313550 intergenic CG44142 - chr3R_7_13310001 chr3R_13310001 RAL-306_75b 720 chr3R 13505483 13505499 chr3R 13505771 13505784 4 287 0.5 0.5 0.5 2.7 301 chr3R 13505483 intergenic not near genes chr3R 13505634 intergenic not near genes chr3R 13505784 intergenic not near genes chr3R_4_13505001 chr3R_13505001 RAL-306_75b 721 chr3R 13607173 13607209 chr3R 13607278 13607314 12 105 0.5 1.0 0.8 6.7 141 chr3R 13607173 3` UTR CG9759 - chr3R 13607244 3` UTR CG9759 - chr3R 13607314 3` UTR CG9759 - chr3R_12_13605001 chr3R_13605001 RAL-306_75b 722 chr3R 13669090 13669113 chr3R 13669186 13669209 11 96 2.0 4.0 3.0 2.8 119 chr3R 13669090 intron Task6 - chr3R 13669150 intron Task6 - chr3R 13669209 intron Task6 - chr3R_11_13665001 chr3R_13665001 RAL-306_75b 723 chr3R 13863693 13863708 chr3R 13863781 13863796 5 88 2.5 1.0 1.8 1.8 103 chr3R 13863693 intergenic not near genes chr3R 13863744 intergenic not near genes chr3R 13863796 intergenic not near genes chr3R_5_13860001 chr3R_13860001 RAL-306_75b 724 chr3R 14021652 14021677 chr3R 14023469 14023494 S-element 7 1817 3.0 2.0 2.5 2.0 1842 chr3R 14021652 intron rdx - chr3R 14022573 intron rdx - chr3R 14023494 intron rdx - chr3R_7_14020001 chr3R_14020001 RAL-306_75b 725 chr3R 14062850 14062877 chr3R 14062927 14062954 5 77 1.5 0.5 1.0 2.5 104 chr3R 14062850 intron foxo + chr3R 14062902 intron foxo + chr3R 14062954 intron foxo + chr3R_5_14060001 chr3R_14060001 RAL-306_75b 726 chr3R 14083403 14083416 chr3R 14083502 14083517 5 100 1.0 0.0 0.5 3.3 114 chr3R 14083403 intron foxo + chr3R 14083460 intron foxo + chr3R 14083517 intron foxo + chr3R_5_14080001 chr3R_14080001 RAL-306_75b 727 chr3R 14117440 14117468 chr3R 14117516 14117541 9 76 5.5 1.5 3.5 2.0 101 chr3R 14117440 intron Kif19A - chr3R 14117490 intron Kif19A - chr3R 14117541 intron Kif19A - chr3R_9_14115001 chr3R_14115001 RAL-306_75b 728 chr3R 14253707 14253715 chr3R 14253786 14253794 4 79 1.5 2.5 2.0 1.3 87 chr3R 14253707 intron Aats-met - chr3R 14253750 intron Aats-met - chr3R 14253794 intron Aats-met - chr3R_4_14250001 chr3R_14250001 RAL-306_75b 729 chr3R 14401058 14401077 chr3R 14401142 14401161 8 84 3.5 1.0 2.2 2.5 103 chr3R 14401058 intron cv-c - chr3R 14401110 intron cv-c - chr3R 14401161 intron cv-c - chr3R_8_14400001 chr3R_14400001 RAL-306_75b 730 chr3R 14440726 14440750 chr3R 14440802 14440826 7 76 2.0 0.5 1.2 3.2 100 chr3R 14440726 intron cv-c - chr3R 14440776 intron cv-c - chr3R 14440826 intron cv-c - chr3R_7_14440001 chr3R_14440001 RAL-306_75b 731 chr3R 14520443 14520472 chr3R 14520543 14520572 4 100 0.5 2.0 1.2 1.8 129 chr3R 14520443 intron Pde6 - chr3R 14520508 intron Pde6 - chr3R 14520572 intron Pde6 - chr3R_4_14520001 chr3R_14520001 RAL-306_75b 732 chr3R 14549036 14549045 chr3R 14549123 14549132 4 87 0.5 0.5 0.5 2.7 96 chr3R 14549036 intron Pde6 - chr3R 14549084 intron Pde6 - chr3R 14549132 intron Pde6 - chr3R_4_14545001 chr3R_14545001 RAL-306_75b 733 chr3R 14617026 14617033 chr3R 14617102 14617109 5 75 2.5 1.0 1.8 1.8 83 chr3R 14617026 intron CG14853 + chr3R 14617068 intron CG14853 + chr3R 14617109 intron CG14853 + chr3R_5_14615001 chr3R_14615001 RAL-306_75b 734 chr3R 14946046 14946068 chr3R 14946191 14946213 6 144 1.0 3.5 2.2 1.9 167 chr3R 14946046 intergenic not near genes chr3R 14946130 intergenic not near genes chr3R 14946213 intergenic not near genes chr3R_6_14945001 chr3R_14945001 RAL-306_75b 735 chr3R 15102504 15102526 chr3R 15109759 15109781 412 5 7255 2.0 3.0 2.5 1.4 7277 chr3R 15102504 intron CG42788 - chr3R 15106142 intron CG42788 - chr3R 15109781 intron CG42788 - chr3R_5_15105001 chr3R_15105001 RAL-306_75b 736 chr3R 15162550 15162579 chr3R 15167317 15167346 F-element 10 4767 3.0 3.5 3.2 2.4 4796 chr3R 15162550 intron Gyc88E + chr3R 15164948 intron Gyc88E + chr3R 15167346 intron Gyc88E + chr3R_10_15160001 chr3R_15160001 RAL-306_75b 737 chr3R 15406146 15406160 chr3R 15406227 15406241 5 81 2.0 0.0 1.0 2.5 95 chr3R 15406146 intron CG6125 - chr3R 15406194 intron CG6125 - chr3R 15406241 intron CG6125 - chr3R_5_15405001 chr3R_15405001 RAL-306_75b 738 chr3R 15594656 15594668 chr3R 15594739 15594751 4 82 0.0 0.0 0.0 4.0 95 chr3R 15594656 intergenic not near genes chr3R 15594704 intergenic not near genes chr3R 15594751 intergenic not near genes chr3R_4_15590001 chr3R_15590001 RAL-306_75b 739 chr3R 15601164 15601195 chr3R 15608686 15608717 412 5 7522 5.0 3.5 4.2 1.0 7553 chr3R 15601164 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608717 intergenic not near genes chr3R_5_15600001 chr3R_15600001 RAL-306_75b 740 chr3R 15618740 15618762 chr3R 15626210 15626236 blood 7 7473 0.0 0.5 0.2 5.8 7496 chr3R 15618740 intergenic not near genes chr3R 15622488 intergenic not near genes chr3R 15626236 intergenic not near genes chr3R_7_15620001 chr3R_15620001 RAL-306_75b 741 chr3R 15891355 15891382 chr3R 15891443 15891470 9 88 1.5 3.0 2.2 2.8 115 chr3R 15891355 intron CG14877 - chr3R 15891412 intron CG14877 - chr3R 15891470 intron CG14877 - chr3R_9_15890001 chr3R_15890001 RAL-306_75b 742 chr3R 16033423 16033440 chr3R 16033504 16033521 4 81 0.5 3.5 2.0 1.3 98 chr3R 16033423 intron pnr + chr3R 16033472 intron pnr + chr3R 16033521 intron pnr + chr3R_4_16030001 chr3R_16030001 RAL-306_75b 743 chr3R 16472575 16472589 chr3R 16472648 16472665 4 75 1.0 5.5 3.2 1.0 90 chr3R 16472575 intergenic Gyc-89Da + chr3R 16472620 5` UTR Gyc-89Da + chr3R 16472665 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-306_75b 744 chr3R 16529239 16529253 chr3R 16529457 16529469 5 217 1.0 1.5 1.2 2.3 230 chr3R 16529239 intron CG42342 + chr3R 16529354 intron CG42342 + chr3R 16529469 intron CG42342 + chr3R_5_16525001 chr3R_16525001 RAL-306_75b 745 chr3R 16531017 16531038 chr3R 16531109 16531130 5 92 4.5 1.0 2.8 1.3 113 chr3R 16531017 intron CG42342 + chr3R 16531074 intron CG42342 + chr3R 16531130 intron CG42342 + chr3R_5_16530001 chr3R_16530001 RAL-306_75b 746 chr3R 16585923 16585945 chr3R 16586000 16586022 4 77 1.5 1.5 1.5 1.6 99 chr3R 16585923 intergenic not near genes chr3R 16585972 intergenic not near genes chr3R 16586022 intergenic not near genes chr3R_4_16585001 chr3R_16585001 RAL-306_75b 747 chr3R 16675320 16675343 chr3R 16675434 16675455 4 113 2.0 1.0 1.5 1.6 135 chr3R 16675320 intron Ubx - chr3R 16675388 intron Ubx - chr3R 16675455 intron Ubx - chr3R_4_16675001 chr3R_16675001 RAL-306_75b 748 chr3R 16756325 16756351 chr3R 16762516 16762542 diver 5 6191 2.5 0.5 1.5 2.0 6217 chr3R 16756325 intron bxd - chr3R 16759434 intron bxd - chr3R 16762542 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-306_75b 749 chr3R 16836970 16836985 chr3R 16837298 16837312 6 328 1.5 1.5 1.5 2.4 342 chr3R 16836970 intron iab-8 - chr3R 16837141 intron iab-8 - chr3R 16837312 intron iab-8 - chr3R_6_16835001 chr3R_16835001 RAL-306_75b 750 chr3R 17027593 17027619 chr3R 17030943 17030969 5 3350 4.5 8.5 6.5 0.7 3376 chr3R 17027593 intron Pxd + chr3R 17029281 exon CG5225 + chr3R 17030969 intergenic CG5225 + chr3R_5_17025001 chr3R_17025001 RAL-306_75b 751 chr3R 17121536 17121547 chr3R 17121731 17121742 4 194 2.5 1.0 1.8 1.4 206 chr3R 17121536 intron cher - chr3R 17121639 intron,exon cher -,CG42779 + chr3R 17121742 intron,exon cher -,CG42779 + chr3R_4_17120001 chr3R_17120001 RAL-306_75b 752 chr3R 17163471 17163497 chr3R 17163552 17163578 5 80 0.0 2.5 1.2 2.3 107 chr3R 17163471 intron Mur89F - chr3R 17163524 intron Mur89F - chr3R 17163578 intron Mur89F - chr3R_5_17160001 chr3R_17160001 RAL-306_75b 753 chr3R 17369441 17369444 chr3R 17369657 17369661 4 216 0.0 0.0 0.0 4.0 220 chr3R 17369441 intergenic not near genes chr3R 17369551 intergenic not near genes chr3R 17369661 intergenic not near genes chr3R_4_17365001 chr3R_17365001 RAL-306_75b 754 chr3R 17370526 17370557 chr3R 17370603 17370633 8 76 1.5 1.5 1.5 3.2 107 chr3R 17370526 intergenic not near genes chr3R 17370580 intergenic not near genes chr3R 17370633 intergenic not near genes chr3R_8_17370001 chr3R_17370001 RAL-306_75b 755 chr3R 17461199 17461228 chr3R 17461281 17461310 6 82 1.0 0.5 0.8 3.3 111 chr3R 17461199 intergenic not near genes chr3R 17461254 intergenic not near genes chr3R 17461310 intergenic not near genes chr3R_6_17460001 chr3R_17460001 RAL-306_75b 756 chr3R 17497965 17497985 chr3R 17498051 17498071 4 86 1.0 3.5 2.2 1.2 106 chr3R 17497965 intron Dscam3 - chr3R 17498018 intron Dscam3 - chr3R 17498071 intron Dscam3 - chr3R_4_17495001 chr3R_17495001 RAL-306_75b 757 chr3R 17566340 17566346 chr3R 17566590 17566595 6 249 3.5 2.0 2.8 1.6 255 chr3R 17566340 intron Hmx + chr3R 17566468 intron Hmx + chr3R 17566595 intron Hmx + chr3R_6_17565001 chr3R_17565001 RAL-306_75b 758 chr3R 17925852 17925889 chr3R 17927318 17927355 hobo 5 1466 0.0 3.5 1.8 1.8 1503 chr3R 17925852 intron cpo + chr3R 17926604 intron cpo + chr3R 17927355 intron cpo + chr3R_5_17925001 chr3R_17925001 RAL-306_75b 759 chr3R 18041753 18041764 chr3R 18041830 18041841 4 77 0.0 0.0 0.0 4.0 88 chr3R 18041753 intergenic not near genes chr3R 18041797 intergenic not near genes chr3R 18041841 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-306_75b 760 chr3R 18501589 18501617 chr3R 18501670 18501697 7 81 1.5 0.5 1.0 3.5 108 chr3R 18501589 intron fru - chr3R 18501643 intron fru - chr3R 18501697 intron fru - chr3R_7_18500001 chr3R_18500001 RAL-306_75b 761 chr3R 18618268 18618284 chr3R 18618353 18618369 6 84 3.0 0.5 1.8 2.1 101 chr3R 18618268 intron,intron qin +,CG14304 - chr3R 18618318 intron,intron qin +,CG14304 - chr3R 18618369 intron,intron qin +,CG14304 - chr3R_6_18615001 chr3R_18615001 RAL-306_75b 762 chr3R 18766785 18766810 chr3R 18766863 18766888 4 78 0.0 0.5 0.2 3.3 103 chr3R 18766785 intron CG7720 - chr3R 18766836 intron CG7720 - chr3R 18766888 intron CG7720 - chr3R_4_18765001 chr3R_18765001 RAL-306_75b 763 chr3R 18785868 18785901 chr3R 18785945 18785978 9 77 1.0 1.5 1.2 4.1 110 chr3R 18785868 intron CG7720 - chr3R 18785923 intron CG7720 - chr3R 18785978 intron CG7720 - chr3R_9_18785001 chr3R_18785001 RAL-306_75b 764 chr3R 18812077 18812107 chr3R 18812155 18812185 12 78 0.5 0.0 0.2 10.0 108 chr3R 18812077 intron CG18208 - chr3R 18812131 intron CG18208 - chr3R 18812185 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-306_75b 765 chr3R 18878025 18878040 chr3R 18878150 18878166 8 125 1.0 2.0 1.5 3.2 141 chr3R 18878025 intergenic not near genes chr3R 18878096 intergenic not near genes chr3R 18878166 intergenic not near genes chr3R_8_18875001 chr3R_18875001 RAL-306_75b 766 chr3R 19340397 19340430 chr3R 19340473 19340507 9 77 1.5 2.0 1.8 3.2 110 chr3R 19340397 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340507 intergenic not near genes chr3R_9_19340001 chr3R_19340001 RAL-306_75b 767 chr3R 19418410 19418441 chr3R 19418502 19418533 7 92 0.5 1.0 0.8 3.9 123 chr3R 19418410 intron CG31221 + chr3R 19418472 intron CG31221 + chr3R 19418533 intron CG31221 + chr3R_7_19415001 chr3R_19415001 RAL-306_75b 768 chr3R 19429739 19429750 chr3R 19429828 19429839 6 89 2.5 0.5 1.5 2.4 100 chr3R 19429739 intron CG31221 + chr3R 19429789 intron CG31221 + chr3R 19429839 intron CG31221 + chr3R_6_19425001 chr3R_19425001 RAL-306_75b 769 chr3R 19593506 19593517 chr3R 19593591 19593602 5 85 1.0 4.5 2.8 1.3 96 chr3R 19593506 intron Dys + chr3R 19593554 intron Dys + chr3R 19593602 intron Dys + chr3R_5_19590001 chr3R_19590001 RAL-306_75b 770 chr3R 19716218 19716247 chr3R 19716295 19716324 6 77 0.0 0.0 0.0 6.0 106 chr3R 19716218 intergenic CG34286 - chr3R 19716271 intergenic CG34286 - chr3R 19716324 intergenic CG34286 - chr3R_6_19715001 chr3R_19715001 RAL-306_75b 771 chr3R 19783184 19783212 chr3R 19783271 19783300 5 88 0.0 0.5 0.2 4.2 116 chr3R 19783184 intergenic CG11407 +,CG11453 + chr3R 19783242 intergenic CG11407 +,CG11453 + chr3R 19783300 intergenic CG11407 +,CG11453 + chr3R_5_19780001 chr3R_19780001 RAL-306_75b 772 chr3R 19839527 19839544 chr3R 19839759 19839775 7 232 4.0 0.0 2.0 2.3 248 chr3R 19839527 intergenic not near genes chr3R 19839651 intergenic not near genes chr3R 19839775 intergenic not near genes chr3R_7_19835001 chr3R_19835001 RAL-306_75b 773 chr3R 19943885 19943902 chr3R 19943965 19943982 4 79 4.5 0.0 2.2 1.2 97 chr3R 19943885 intron Hs6st - chr3R 19943934 intron Hs6st - chr3R 19943982 intron Hs6st - chr3R_4_19940001 chr3R_19940001 RAL-306_75b 774 chr3R 20041118 20041144 chr3R 20041220 20041246 5 102 1.0 2.0 1.5 2.0 128 chr3R 20041118 intron CG17193 - chr3R 20041182 intron CG17193 - chr3R 20041246 intron CG17193 - chr3R_5_20040001 chr3R_20040001 RAL-306_75b 775 chr3R 20077053 20077061 chr3R 20077139 20077147 5 86 2.5 1.0 1.8 1.8 94 chr3R 20077053 intergenic not near genes chr3R 20077100 intergenic not near genes chr3R 20077147 intergenic not near genes chr3R_5_20075001 chr3R_20075001 RAL-306_75b 776 chr3R 20222568 20222580 chr3R 20222783 20222796 6 215 1.0 4.5 2.8 1.6 228 chr3R 20222568 intron Nlg4 + chr3R 20222682 intron Nlg4 + chr3R 20222796 intron Nlg4 + chr3R_6_20220001 chr3R_20220001 RAL-306_75b 777 chr3R 20231442 20231471 chr3R 20231621 20231650 6 179 13.5 8.0 10.8 0.5 208 chr3R 20231442 intron Nlg4 + chr3R 20231546 intron Nlg4 + chr3R 20231650 intron Nlg4 + chr3R_6_20230001 chr3R_20230001 RAL-306_75b 778 chr3R 20266516 20266540 chr3R 20272987 20273010 Burdock 8 6471 0.5 1.0 0.8 4.4 6494 chr3R 20266516 intron cic + chr3R 20269763 intron cic + chr3R 20273010 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-306_75b 779 chr3R 20282282 20282301 chr3R 20282358 20282377 4 76 0.0 5.5 2.8 1.1 95 chr3R 20282282 intron cic + chr3R 20282330 intron cic + chr3R 20282377 intron cic + chr3R_4_20280001 chr3R_20280001 RAL-306_75b 780 chr3R 20512346 20512353 chr3R 20512429 20512436 4 82 4.5 1.0 2.8 1.1 90 chr3R 20512346 5` UTR CG4288 - chr3R 20512391 5` UTR CG4288 - chr3R 20512436 5` UTR CG4288 - chr3R_4_20510001 chr3R_20510001 RAL-306_75b 781 chr3R 20771704 20771721 chr3R 20771785 20771802 5 81 0.0 1.0 0.5 3.3 98 chr3R 20771704 intron,intron Syp +,Takl1 - chr3R 20771753 intron,intron Syp +,Takl1 - chr3R 20771802 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-306_75b 782 chr3R 20870267 20870284 chr3R 20870349 20870367 5 84 0.5 1.0 0.8 2.8 100 chr3R 20870267 intergenic not near genes chr3R 20870317 intergenic not near genes chr3R 20870367 intergenic not near genes chr3R_5_20870001 chr3R_20870001 RAL-306_75b 783 chr3R 20901656 20901667 chr3R 20901759 20901770 4 103 1.0 3.0 2.0 1.3 114 chr3R 20901656 intergenic CG5621 + chr3R 20901713 intergenic CG5621 + chr3R 20901770 intergenic CG5621 + chr3R_4_20900001 chr3R_20900001 RAL-306_75b 784 chr3R 20942817 20942827 chr3R 20942893 20942903 4 76 1.5 2.5 2.0 1.3 86 chr3R 20942817 intron CG31191 - chr3R 20942860 intron CG31191 - chr3R 20942903 intron CG31191 - chr3R_4_20940001 chr3R_20940001 RAL-306_75b 785 chr3R 21020408 21020433 chr3R 21020484 21020509 8 76 2.0 0.0 1.0 4.0 101 chr3R 21020408 3` UTR Rlip + chr3R 21020458 3` UTR Rlip + chr3R 21020509 3` UTR Rlip + chr3R_8_21020001 chr3R_21020001 RAL-306_75b 786 chr3R 21108052 21108066 chr3R 21108313 21108327 4 261 0.0 4.5 2.2 1.2 275 chr3R 21108052 intergenic Sec15 -,rtet + chr3R 21108190 intergenic Sec15 -,rtet + chr3R 21108327 intergenic rtet +,Sec15 - chr3R_4_21105001 chr3R_21105001 RAL-306_75b 787 chr3R 21183257 21183262 chr3R 21183335 21183337 4 77 0.5 1.5 1.0 2.0 80 chr3R 21183257 intron SNF4Agamma + chr3R 21183297 intron SNF4Agamma + chr3R 21183337 intron SNF4Agamma + chr3R_4_21180001 chr3R_21180001 RAL-306_75b 788 chr3R 21385692 21385951 chr3R 21385774 21386028 4 78 0.0 0.0 0.0 4.0 336 chr3R 21385692 intergenic not near genes chr3R 21385860 intergenic not near genes chr3R 21386028 intergenic not near genes chr3R_4_21385001 chr3R_21385001 RAL-306_75b 789 chr3R 8339247 8339247 chr3R 21907535 21907535 5 13568288 11.0 7.5 9.2 0.5 13568288 chr3R 8339247 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-306_75b 790 chr3R 21907535 21907535 chr3R 28831801 28831802 15 6924266 9.0 5.0 7.0 1.9 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_15_25365001 chr3R_25365001 RAL-306_75b 791 chr3R 21907536 21907536 chr3R 28831801 28831802 13 6924266 9.0 5.0 7.0 1.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_13_25365001 chr3R_25365001 RAL-306_75b 792 chr3R 21952134 21952166 chr3R 21952219 21952251 7 85 4.5 6.0 5.2 1.1 117 chr3R 21952134 intron Eip93F + chr3R 21952192 intron Eip93F + chr3R 21952251 intron Eip93F + chr3R_7_21950001 chr3R_21950001 RAL-306_75b 793 chr3R 22137609 22137614 chr3R 22137824 22137829 4 214 1.5 1.5 1.5 1.6 220 chr3R 22137609 intron SKIP + chr3R 22137719 intron SKIP + chr3R 22137829 intron SKIP + chr3R_4_22135001 chr3R_22135001 RAL-306_75b 794 chr3R 22234687 22234714 chr3R 22236006 22236033 pogo 5 1319 3.0 3.0 3.0 1.2 1346 chr3R 22234687 intron SKIP + chr3R 22235360 intron SKIP + chr3R 22236033 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-306_75b 795 chr3R 22840814 22840849 chr3R 22841276 22841311 6 462 0.0 4.0 2.0 2.0 497 chr3R 22840814 intergenic not near genes chr3R 22841062 intergenic not near genes chr3R 22841311 intergenic not near genes chr3R_6_22840001 chr3R_22840001 RAL-306_75b 796 chr3R 22880940 22880960 chr3R 22881077 22881098 8 138 1.0 0.0 0.5 5.3 158 chr3R 22880940 intergenic not near genes chr3R 22881019 intergenic not near genes chr3R 22881098 intergenic not near genes chr3R_8_22880001 chr3R_22880001 RAL-306_75b 797 chr3R 23073653 23073680 chr3R 23073742 23073766 6 88 7.0 4.5 5.8 0.9 113 chr3R 23073653 intron CG13830 - chr3R 23073710 intron CG13830 - chr3R 23073766 intron CG13830 - chr3R_6_23070001 chr3R_23070001 RAL-306_75b 798 chr3R 23182493 23182519 chr3R 23182610 23182636 5 116 5.5 5.0 5.2 0.8 143 chr3R 23182493 intron Irk1 + chr3R 23182564 intron Irk1 + chr3R 23182636 intron Irk1 + chr3R_5_23180001 chr3R_23180001 RAL-306_75b 799 chr3R 23335454 23335466 chr3R 23335532 23335544 5 78 1.0 3.0 2.0 1.7 90 chr3R 23335454 intron pnt - chr3R 23335499 intron pnt - chr3R 23335544 intron pnt - chr3R_5_23335001 chr3R_23335001 RAL-306_75b 800 chr3R 23453683 23453713 chr3R 23453762 23453792 8 78 1.0 1.0 1.0 4.0 109 chr3R 23453683 intron CG4374 - chr3R 23453738 intron CG4374 - chr3R 23453792 intron CG4374 - chr3R_8_23450001 chr3R_23450001 RAL-306_75b 801 chr3R 23564444 23564476 chr3R 23564588 23564620 8 144 1.5 6.5 4.0 1.6 176 chr3R 23564444 intron beat-IV + chr3R 23564532 intron beat-IV + chr3R 23564620 intron beat-IV + chr3R_8_23560001 chr3R_23560001 RAL-306_75b 802 chr3R 23568892 23568906 chr3R 23568970 23568984 6 78 3.0 7.0 5.0 1.0 92 chr3R 23568892 intron beat-IV + chr3R 23568938 intron beat-IV + chr3R 23568984 intron beat-IV + chr3R_6_23565001 chr3R_23565001 RAL-306_75b 803 chr3R 23626141 23626349 chr3R 23626235 23626448 4 96 6.0 7.0 6.5 0.5 307 chr3R 23626141 intron CG31145 - chr3R 23626294 intron CG31145 - chr3R 23626448 intron CG31145 - chr3R_4_23625001 chr3R_23625001 RAL-306_75b 804 chr3R 23835107 23835131 chr3R 23835346 23835370 5 239 1.5 1.0 1.2 2.3 263 chr3R 23835107 intron CG34355 + chr3R 23835238 intron CG34355 + chr3R 23835370 intron CG34355 + chr3R_5_23835001 chr3R_23835001 RAL-306_75b 805 chr3R 23835417 23835425 chr3R 23844567 23844575 roo 4 9149 3.5 0.5 2.0 1.3 9158 chr3R 23835417 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844575 intron CG34355 + chr3R_4_23835001 chr3R_23835001 RAL-306_75b 806 chr3R 23944913 23944931 chr3R 23944998 23945016 5 85 0.5 0.5 0.5 3.3 103 chr3R 23944913 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945016 exon CG12268 - chr3R_5_23940001 chr3R_23940001 RAL-306_75b 807 chr3R 24072088 24072115 chr3R 24072526 24072552 jockey 4 437 1.0 0.5 0.8 2.2 464 chr3R 24072088 intron 4EHP - chr3R 24072320 intron 4EHP - chr3R 24072552 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-306_75b 808 chr3R 24076923 24076938 chr3R 24078390 24078405 hobo 10 1466 3.5 1.5 2.5 2.9 1482 chr3R 24076923 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078405 intron 4EHP - chr3R_10_24075001 chr3R_24075001 RAL-306_75b 809 chr3R 24207218 24207238 chr3R 24212294 24212314 flea 5 5076 0.5 2.5 1.5 2.0 5096 chr3R 24207218 intron twin - chr3R 24209766 intron twin - chr3R 24212314 intron twin - chr3R_5_24205001 chr3R_24205001 RAL-306_75b 810 chr3R 24431600 24431627 chr3R 24431679 24431705 4 79 1.5 0.5 1.0 2.0 105 chr3R 24431600 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431705 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-306_75b 811 chr3R 24493285 24493298 chr3R 24493513 24493528 BS 8 229 2.5 5.0 3.8 1.7 243 chr3R 24493285 intergenic not near genes chr3R 24493406 intergenic not near genes chr3R 24493528 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-306_75b 812 chr3R 24522328 24522337 chr3R 24522568 24522577 6 240 3.0 1.5 2.2 1.9 249 chr3R 24522328 3` UTR Pp1alpha-96A + chr3R 24522452 intergenic CG13622 -,Pp1alpha-96A + chr3R 24522577 3` UTR CG13622 - chr3R_6_24520001 chr3R_24520001 RAL-306_75b 813 chr3R 24670181 24670190 chr3R 24670265 24670274 4 84 0.5 2.5 1.5 1.6 93 chr3R 24670181 intron slo + chr3R 24670228 intron slo + chr3R 24670274 intron slo + chr3R_4_24670001 chr3R_24670001 RAL-306_75b 814 chr3R 24743051 24743055 chr3R 24743136 24743140 4 85 2.0 1.0 1.5 1.6 89 chr3R 24743051 intron tok + chr3R 24743096 intron tok + chr3R 24743140 intron tok + chr3R_4_24740001 chr3R_24740001 RAL-306_75b 815 chr3R 24927127 24927153 chr3R 24931918 24931942 Doc 4 4790 2.5 1.0 1.8 1.4 4815 chr3R 24927127 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931942 intergenic CG11771 + chr3R_4_24925001 chr3R_24925001 RAL-306_75b 816 chr3R 24974913 24974936 chr3R 24974992 24975012 5 78 5.0 2.5 3.8 1.0 99 chr3R 24974913 intergenic not near genes chr3R 24974962 intergenic not near genes chr3R 24975012 intergenic not near genes chr3R_5_24970001 chr3R_24970001 RAL-306_75b 817 chr3R 25004907 25004912 chr3R 25004990 25004995 4 83 2.5 2.0 2.2 1.2 88 chr3R 25004907 intron tnc + chr3R 25004951 intron tnc + chr3R 25004995 intron tnc + chr3R_4_25000001 chr3R_25000001 RAL-306_75b 818 chr3R 25052228 25052248 chr3R 25052324 25052344 7 96 1.0 1.0 1.0 3.5 116 chr3R 25052228 intron CG11791 + chr3R 25052286 intron CG11791 + chr3R 25052344 intron CG11791 + chr3R_7_25050001 chr3R_25050001 RAL-306_75b 819 chr3R 25235816 25235842 chr3R 25235896 25235922 6 80 1.0 0.0 0.5 4.0 106 chr3R 25235816 intergenic CG10420 - chr3R 25235869 intergenic CG10420 - chr3R 25235922 intergenic CG10420 - chr3R_6_25235001 chr3R_25235001 RAL-306_75b 820 chr3R 25368478 25368503 chr3R 25368596 25368621 6 118 2.5 0.0 1.2 2.7 143 chr3R 25368478 intron Fur1 - chr3R 25368550 intron Fur1 - chr3R 25368621 intron Fur1 - chr3R_6_25365001 chr3R_25365001 RAL-306_75b 821 chr3R 25431847 25431871 chr3R 25431972 25431996 9 125 1.5 0.5 1.0 4.5 149 chr3R 25431847 intron Fur1 - chr3R 25431922 5` UTR Fur1 - chr3R 25431996 intron Fur1 - chr3R_9_25430001 chr3R_25430001 RAL-306_75b 822 chr3R 25725831 25725840 chr3R 25734991 25735000 roo 5 9160 6.5 0.0 3.2 1.2 9169 chr3R 25725831 intron LpR2 - chr3R 25730416 intron LpR2 - chr3R 25735000 intron LpR2 - chr3R_5_25730001 chr3R_25730001 RAL-306_75b 823 chr3R 25738629 25738655 chr3R 25738717 25738742 5 88 2.5 3.0 2.8 1.3 113 chr3R 25738629 intron LpR2 - chr3R 25738686 intron LpR2 - chr3R 25738742 intron LpR2 - chr3R_5_25735001 chr3R_25735001 RAL-306_75b 824 chr3R 25755762 25755778 chr3R 25755850 25755866 5 88 3.0 4.0 3.5 1.1 104 chr3R 25755762 intron LpR1 - chr3R 25755814 intron LpR1 - chr3R 25755866 intron LpR1 - chr3R_5_25755001 chr3R_25755001 RAL-306_75b 825 chr3R 25832697 25832722 chr3R 25841879 25841904 roo 5 9182 1.0 2.0 1.5 2.0 9207 chr3R 25832697 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841904 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-306_75b 826 chr3R 25843642 25843666 chr3R 25843772 25843796 6 130 2.0 1.5 1.8 2.1 154 chr3R 25843642 intergenic CR45653 + chr3R 25843719 intergenic CR45653 + chr3R 25843796 intergenic CR45653 + chr3R_6_25840001 chr3R_25840001 RAL-306_75b 827 chr3R 25848673 25848702 chr3R 25848762 25848791 5 88 1.0 0.0 0.5 3.3 118 chr3R 25848673 intergenic CR45657 + chr3R 25848732 intergenic CR45657 + chr3R 25848791 intergenic CR45657 + chr3R_5_25845001 chr3R_25845001 RAL-306_75b 828 chr3R 25851501 25851533 chr3R 25851580 25851612 4 78 5.0 7.0 6.0 0.6 111 chr3R 25851501 intergenic CG5886 +,CG14545 - chr3R 25851556 intergenic CG5886 +,CG14545 - chr3R 25851612 intergenic CG5886 +,CG14545 - chr3R_4_25850001 chr3R_25850001 RAL-306_75b 829 chr3R 25861834 25861850 chr3R 25861911 25861927 4 77 3.5 5.5 4.5 0.7 93 chr3R 25861834 intron CG5890 + chr3R 25861880 intron CG5890 + chr3R 25861927 intron CG5890 + chr3R_4_25860001 chr3R_25860001 RAL-306_75b 830 chr3R 26108827 26108837 chr3R 26117407 26117418 Tirant 4 8581 0.0 0.0 0.0 4.0 8591 chr3R 26108827 5` UTR CG31324 + chr3R 26113122 intron CG31324 + chr3R 26117418 intron CG31324 + chr3R_4_26110001 chr3R_26110001 RAL-306_75b 831 chr3R 26122220 26122479 chr3R 26122322 26122555 6 80 2.5 0.0 1.2 2.7 335 chr3R 26122220 intron CG31324 + chr3R 26122388 intron CG31324 + chr3R 26122555 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-306_75b 832 chr3R 26265818 26265836 chr3R 26265906 26265922 7 88 0.5 1.0 0.8 3.9 104 chr3R 26265818 intron CG6154 + chr3R 26265870 intron CG6154 + chr3R 26265922 intron CG6154 + chr3R_7_26265001 chr3R_26265001 RAL-306_75b 833 chr3R 26292112 26292140 chr3R 26292191 26292220 5 79 1.0 3.5 2.2 1.6 108 chr3R 26292112 intergenic not near genes chr3R 26292166 intergenic not near genes chr3R 26292220 intergenic not near genes chr3R_5_26290001 chr3R_26290001 RAL-306_75b 834 chr3R 26294717 26294750 chr3R 26294795 26294828 9 78 2.0 1.5 1.8 3.2 111 chr3R 26294717 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294828 intergenic not near genes chr3R_9_26290001 chr3R_26290001 RAL-306_75b 835 chr3R 26342679 26342711 chr3R 26342822 26342854 7 143 2.0 3.0 2.5 2.0 175 chr3R 26342679 intron CG33970 + chr3R 26342766 intron CG33970 + chr3R 26342854 intron CG33970 + chr3R_7_26340001 chr3R_26340001 RAL-306_75b 836 chr3R 26531676 26531682 chr3R 26531776 26531782 4 100 2.5 2.5 2.5 1.1 106 chr3R 26531676 intron plum - chr3R 26531729 intron plum - chr3R 26531782 intron plum - chr3R_4_26530001 chr3R_26530001 RAL-306_75b 837 chr3R 26558336 26558357 chr3R 26565648 26565669 Stalker4 4 7312 1.0 2.0 1.5 1.6 7333 chr3R 26558336 intron scrib + chr3R 26562002 intron scrib + chr3R 26565669 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-306_75b 838 chr3R 26641639 26641664 chr3R 26641726 26641751 4 86 4.5 1.0 2.8 1.1 112 chr3R 26641639 intergenic not near genes chr3R 26641695 intergenic not near genes chr3R 26641751 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-306_75b 839 chr3R 26810551 26810586 chr3R 26811036 26811071 roo 10 485 0.5 1.0 0.8 5.6 520 chr3R 26810551 intron Tl + chr3R 26810811 intron Tl + chr3R 26811071 intron Tl + chr3R_10_26810001 chr3R_26810001 RAL-306_75b 840 chr3R 26824311 26824327 chr3R 26824428 26824443 4 117 1.0 5.0 3.0 1.0 132 chr3R 26824311 intron Tl + chr3R 26824377 intron Tl + chr3R 26824443 intron Tl + chr3R_4_26820001 chr3R_26820001 RAL-306_75b 841 chr3R 26927978 26927998 chr3R 26928317 26928338 5 340 1.0 4.0 2.5 1.4 360 chr3R 26927978 intron sda + chr3R 26928158 intron sda + chr3R 26928338 intron sda + chr3R_5_26925001 chr3R_26925001 RAL-306_75b 842 chr3R 27007409 27007423 chr3R 27016544 27016558 roo 4 9135 2.5 1.0 1.8 1.4 9149 chr3R 27007409 intron RYa-R + chr3R 27011984 intron RYa-R + chr3R 27016558 intron RYa-R + chr3R_4_27010001 chr3R_27010001 RAL-306_75b 843 chr3R 27028737 27028756 chr3R 27028816 27028835 10 79 0.5 2.5 1.5 4.0 98 chr3R 27028737 intron RYa-R + chr3R 27028786 intron RYa-R + chr3R 27028835 intron RYa-R + chr3R_10_27025001 chr3R_27025001 RAL-306_75b 844 chr3R 27140516 27140540 chr3R 27148126 27148150 412 8 7609 3.5 0.0 1.8 2.9 7634 chr3R 27140516 intron CG6051 - chr3R 27144333 intron CG6051 - chr3R 27148150 intron CG6051 - chr3R_8_27140001 chr3R_27140001 RAL-306_75b 845 chr3R 27195585 27195604 chr3R 27195671 27195690 8 85 2.0 2.0 2.0 2.7 105 chr3R 27195585 intergenic not near genes chr3R 27195638 intergenic not near genes chr3R 27195690 intergenic not near genes chr3R_8_27195001 chr3R_27195001 RAL-306_75b 846 chr3R 27329491 27329494 chr3R 27329568 27329571 4 77 2.0 1.5 1.8 1.4 80 chr3R 27329491 intergenic CG3330 - chr3R 27329531 intergenic CG3330 - chr3R 27329571 intergenic CG3330 - chr3R_4_27325001 chr3R_27325001 RAL-306_75b 847 chr3R 27492377 27492401 chr3R 27492464 27492488 5 87 0.5 0.5 0.5 3.3 111 chr3R 27492377 intergenic not near genes chr3R 27492432 intergenic not near genes chr3R 27492488 intergenic not near genes chr3R_5_27490001 chr3R_27490001 RAL-306_75b 848 chr3R 27517443 27517457 chr3R 27517548 27517562 5 105 2.0 1.5 1.8 1.8 119 chr3R 27517443 intergenic CG13972 - chr3R 27517502 intergenic CG13972 - chr3R 27517562 intergenic CG13972 - chr3R_5_27515001 chr3R_27515001 RAL-306_75b 849 chr3R 27535782 27535815 chr3R 27535880 27535913 4 98 0.5 1.0 0.8 2.2 131 chr3R 27535782 intergenic CR44289 - chr3R 27535848 3` UTR CR44289 - chr3R 27535913 3` UTR CR44289 - chr3R_4_27535001 chr3R_27535001 RAL-306_75b 850 chr3R 27706799 27706804 chr3R 27706875 27706881 4 77 1.0 0.5 0.8 2.2 82 chr3R 27706799 intergenic CG12428 -,CG12877 + chr3R 27706840 intergenic CG12428 -,CG12877 + chr3R 27706881 intergenic CG12428 -,CG12877 + chr3R_4_27705001 chr3R_27705001 RAL-306_75b 851 chr3R 27799944 27799964 chr3R 27800026 27800046 4 82 2.0 3.0 2.5 1.1 102 chr3R 27799944 intron CG34353 - chr3R 27799995 intron CG34353 - chr3R 27800046 intron CG34353 - chr3R_4_27795001 chr3R_27795001 RAL-306_75b 852 chr3R 27875700 27875733 chr3R 27882755 27882788 297 4 7055 1.0 2.0 1.5 1.6 7088 chr3R 27875700 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882788 intron CG34353 - chr3R_4_27875001 chr3R_27875001 RAL-306_75b 853 chr3R 27970836 27970844 chr3R 27970926 27970934 4 90 0.5 1.0 0.8 2.2 98 chr3R 27970836 intron betaTub97EF - chr3R 27970885 intron betaTub97EF - chr3R 27970934 intron betaTub97EF - chr3R_4_27970001 chr3R_27970001 RAL-306_75b 854 chr3R 28068495 28068528 chr3R 28073937 28073968 I-element 9 5442 0.0 0.5 0.2 7.5 5473 chr3R 28068495 intron CG34362 + chr3R 28071232 intron CG34362 + chr3R 28073968 intron CG34362 + chr3R_9_28070001 chr3R_28070001 RAL-306_75b 855 chr3R 28137690 28137716 chr3R 28137770 28137796 4 80 3.5 7.5 5.5 0.6 106 chr3R 28137690 intergenic not near genes chr3R 28137743 intergenic not near genes chr3R 28137796 intergenic not near genes chr3R_4_28135001 chr3R_28135001 RAL-306_75b 856 chr3R 28173681 28173692 chr3R 28181111 28181120 mdg1 4 7429 0.0 1.5 0.8 2.2 7439 chr3R 28173681 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181120 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-306_75b 857 chr3R 28253337 28253372 chr3R 28255847 28255882 jockey 9 2509 1.5 4.0 2.8 2.4 2545 chr3R 28253337 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255882 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-306_75b 858 chr3R 28282997 28283017 chr3R 28283626 28283646 4 629 6.5 10.0 8.2 0.4 649 chr3R 28282997 exon CG34436 + chr3R 28283322 exon CG34436 + chr3R 28283646 intergenic CG34437 +,CG34436 + chr3R_4_28280001 chr3R_28280001 RAL-306_75b 859 chr3R 28345650 28345659 chr3R 28345726 28345735 5 76 1.5 1.5 1.5 2.0 85 chr3R 28345650 intergenic Moca-cyp + chr3R 28345692 intergenic not near genes chr3R 28345735 intergenic not near genes chr3R_5_28345001 chr3R_28345001 RAL-306_75b 860 chr3R 28407036 28407067 chr3R 28407128 28407160 5 92 1.0 0.0 0.5 3.3 124 chr3R 28407036 intergenic not near genes chr3R 28407098 intergenic not near genes chr3R 28407160 intergenic not near genes chr3R_5_28405001 chr3R_28405001 RAL-306_75b 861 chr3R 28417630 28417654 chr3R 28417721 28417745 4 91 1.0 1.5 1.2 1.8 115 chr3R 28417630 intergenic not near genes chr3R 28417688 intergenic not near genes chr3R 28417745 intergenic beat-VI + chr3R_4_28415001 chr3R_28415001 RAL-306_75b 862 chr3R 28454205 28454230 chr3R 28454388 28454413 7 183 6.5 1.0 3.8 1.5 208 chr3R 28454205 intron beat-VI + chr3R 28454309 intron beat-VI + chr3R 28454413 intron beat-VI + chr3R_7_28450001 chr3R_28450001 RAL-306_75b 863 chr3R 28478496 28478511 chr3R 28478572 28478587 6 76 2.0 3.0 2.5 1.7 91 chr3R 28478496 intergenic not near genes chr3R 28478542 intergenic not near genes chr3R 28478587 intergenic not near genes chr3R_6_28475001 chr3R_28475001 RAL-306_75b 864 chr3R 28554697 28554728 chr3R 28554788 28554818 5 91 1.0 1.0 1.0 2.5 121 chr3R 28554697 intergenic not near genes chr3R 28554758 intergenic not near genes chr3R 28554818 intergenic not near genes chr3R_5_28550001 chr3R_28550001 RAL-306_75b 865 chr3R 28626196 28626218 chr3R 28626296 28626320 6 100 0.5 1.0 0.8 3.3 124 chr3R 28626196 intron CG10011 - chr3R 28626258 intron CG10011 - chr3R 28626320 intron CG10011 - chr3R_6_28625001 chr3R_28625001 RAL-306_75b 866 chr3R 28758290 28758305 chr3R 28763907 28763922 roo 5 5617 3.0 0.0 1.5 2.0 5632 chr3R 28758290 intergenic aqrs - chr3R 28761106 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-306_75b 867 chr3R 28792885 28792904 chr3R 28797980 28797999 jockey 4 5095 3.0 1.5 2.2 1.2 5114 chr3R 28792885 intergenic not near genes chr3R 28795442 intergenic not near genes chr3R 28797999 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-306_75b 868 chr3R 21907534 21907536 chr3R 28831799 28831802 46 6924266 9.0 5.5 7.2 5.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_46_25365001 chr3R_25365001 RAL-306_75b 869 chr3R 28939783 28939796 chr3R 28939871 28939884 4 88 1.0 2.0 1.5 1.6 101 chr3R 28939783 intron CG14521 - chr3R 28939834 intron CG14521 - chr3R 28939884 intron CG14521 - chr3R_4_28935001 chr3R_28935001 RAL-306_75b 870 chr3R 29009422 29009440 chr3R 29009564 29009582 4 142 1.5 3.0 2.2 1.2 160 chr3R 29009422 intron wat - chr3R 29009502 intron wat - chr3R 29009582 intron wat - chr3R_4_29005001 chr3R_29005001 RAL-306_75b 871 chr3R 29032748 29032766 chr3R 29032825 29032843 5 77 1.0 0.0 0.5 3.3 95 chr3R 29032748 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032796 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032843 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_5_29030001 chr3R_29030001 RAL-306_75b 872 chr3R 29070065 29070080 chr3R 29070146 29070160 4 80 1.5 3.0 2.2 1.2 95 chr3R 29070065 intron CG11873 + chr3R 29070112 intron CG11873 + chr3R 29070160 intron CG11873 + chr3R_4_29070001 chr3R_29070001 RAL-306_75b 873 chr3R 29179652 29179675 chr3R 29180112 29180135 7 460 1.0 1.5 1.2 3.2 483 chr3R 29179652 intron CG14509 - chr3R 29179894 intron CG14509 - chr3R 29180135 intron CG14509 - chr3R_7_29175001 chr3R_29175001 RAL-306_75b 874 chr3R 29238776 29238787 chr3R 29238889 29238901 5 114 0.0 0.5 0.2 4.2 125 chr3R 29238776 intergenic CG31427 -,CG11951 - chr3R 29238838 3` UTR CG31427 - chr3R 29238901 3` UTR CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-306_75b 875 chr3R 29240315 29240344 chr3R 29240398 29240428 8 84 1.5 2.5 2.0 2.7 113 chr3R 29240315 5` UTR CG31427 - chr3R 29240372 intergenic CG31427 -,CG31445 - chr3R 29240428 intergenic CG31427 -,CG31445 - chr3R_8_29240001 chr3R_29240001 RAL-306_75b 876 chr3R 29319831 29319842 chr3R 29320150 29320161 jockey 4 318 2.0 2.0 2.0 1.3 330 chr3R 29319831 intergenic Cnx99A - chr3R 29319996 intergenic Cnx99A - chr3R 29320161 intergenic not near genes chr3R_4_29315001 chr3R_29315001 RAL-306_75b 877 chr3R 29430384 29430406 chr3R 29430490 29430512 6 106 1.5 2.0 1.8 2.1 128 chr3R 29430384 intron Ptp99A + chr3R 29430448 intron Ptp99A + chr3R 29430512 intron Ptp99A + chr3R_6_29430001 chr3R_29430001 RAL-306_75b 878 chr3R 29439730 29439741 chr3R 29439816 29439830 5 88 1.5 3.0 2.2 1.6 100 chr3R 29439730 intron Ptp99A + chr3R 29439780 intron Ptp99A + chr3R 29439830 intron Ptp99A + chr3R_5_29435001 chr3R_29435001 RAL-306_75b 879 chr3R 29606964 29606967 chr3R 29607041 29607045 4 77 0.0 3.0 1.5 1.6 81 chr3R 29606964 intron alph + chr3R 29607004 intron alph + chr3R 29607045 intron alph + chr3R_4_29605001 chr3R_29605001 RAL-306_75b 880 chr3R 29738273 29738294 chr3R 29739740 29739761 hobo 4 1466 1.5 4.5 3.0 1.0 1488 chr3R 29738273 intergenic CG1969 +,CG7598 + chr3R 29739017 intron CG1969 + chr3R 29739761 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 RAL-306_75b 881 chr3R 29760371 29760384 chr3R 29761572 29761585 pogo 4 1201 1.5 3.5 2.5 1.1 1214 chr3R 29760371 intergenic not near genes chr3R 29760978 intergenic not near genes chr3R 29761585 intergenic not near genes chr3R_4_29760001 chr3R_29760001 RAL-306_75b 882 chr3R 29882038 29882048 chr3R 29891193 29891203 roo 5 9156 2.0 3.0 2.5 1.4 9165 chr3R 29882038 intron CG31038 + chr3R 29886620 intron CG31038 + chr3R 29891203 intron CG31038 + chr3R_5_29885001 chr3R_29885001 RAL-306_75b 883 chr3R 29963479 29963510 chr3R 29963581 29963612 4 102 0.0 2.5 1.2 1.8 133 chr3R 29963479 intron TkR99D - chr3R 29963546 intron TkR99D - chr3R 29963612 intron TkR99D - chr3R_4_29960001 chr3R_29960001 RAL-306_75b 884 chr3R 29968781 29968793 chr3R 29968964 29968977 7 184 1.5 2.5 2.0 2.3 196 chr3R 29968781 intron TkR99D - chr3R 29968879 intron TkR99D - chr3R 29968977 intron TkR99D - chr3R_7_29965001 chr3R_29965001 RAL-306_75b 885 chr3R 30046335 30046361 chr3R 30046457 30046484 5 123 3.5 0.5 2.0 1.7 149 chr3R 30046335 intergenic CG7943 +,RpL32 - chr3R 30046410 intergenic CG7943 +,RpL32 - chr3R 30046484 5` UTR CG7943 + chr3R_5_30045001 chr3R_30045001 RAL-306_75b 886 chr3R 30077905 30077919 chr3R 30077992 30078006 5 87 1.5 0.5 1.0 2.5 101 chr3R 30077905 intron sima + chr3R 30077956 intron sima + chr3R 30078006 intron sima + chr3R_5_30075001 chr3R_30075001 RAL-306_75b 887 chr3R 30224651 30224668 chr3R 30224729 30224746 5 78 2.5 0.0 1.2 2.3 95 chr3R 30224651 intergenic not near genes chr3R 30224698 intergenic not near genes chr3R 30224746 intergenic not near genes chr3R_5_30220001 chr3R_30220001 RAL-306_75b 888 chr3R 30269641 30269666 chr3R 30269724 30269749 4 83 0.0 4.5 2.2 1.2 108 chr3R 30269641 intergenic not near genes chr3R 30269695 intergenic not near genes chr3R 30269749 intergenic not near genes chr3R_4_30265001 chr3R_30265001 RAL-306_75b 889 chr3R 30292394 30292408 chr3R 30292472 30292486 6 78 2.5 0.0 1.2 2.7 92 chr3R 30292394 intron hdc + chr3R 30292440 intron hdc + chr3R 30292486 intron hdc + chr3R_6_30290001 chr3R_30290001 RAL-306_75b 890 chr3R 30332032 30332045 chr3R 30332111 30332124 6 78 4.0 4.0 4.0 1.2 92 chr3R 30332032 intron hdc + chr3R 30332078 intron hdc + chr3R 30332124 intron hdc + chr3R_6_30330001 chr3R_30330001 RAL-306_75b 891 chr3R 30347030 30347035 chr3R 30347114 30347117 5 84 2.0 0.0 1.0 2.5 87 chr3R 30347030 intron hdc + chr3R 30347074 intron hdc + chr3R 30347117 intron hdc + chr3R_5_30345001 chr3R_30345001 RAL-306_75b 892 chr3R 30456393 30456415 chr3R 30456473 30456495 12 80 0.5 1.5 1.0 6.0 102 chr3R 30456393 intergenic CG2224 - chr3R 30456444 3` UTR CG2224 - chr3R 30456495 3` UTR CG2224 - chr3R_12_30455001 chr3R_30455001 RAL-306_75b 893 chr3R 30458013 30458046 chr3R 30458093 30458126 7 80 2.5 1.0 1.8 2.5 113 chr3R 30458013 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458126 intron CG2224 - chr3R_7_30455001 chr3R_30455001 RAL-306_75b 894 chr3R 30480490 30480513 chr3R 30482957 30482981 jockey 4 2468 1.0 0.5 0.8 2.2 2491 chr3R 30480490 intron PH4alphaEFB + chr3R 30481736 intron PH4alphaEFB + chr3R 30482981 intron PH4alphaEFB + chr3R_4_30480001 chr3R_30480001 RAL-306_75b 895 chr3R 30544728 30544751 chr3R 30544820 30544843 4 92 0.5 1.0 0.8 2.2 115 chr3R 30544728 intron tmod + chr3R 30544786 intron tmod + chr3R 30544843 intron tmod + chr3R_4_30540001 chr3R_30540001 RAL-306_75b 896 chr3R 30560365 30560381 chr3R 30560442 30560460 6 79 0.5 0.5 0.5 4.0 95 chr3R 30560365 intron tmod + chr3R 30560412 intron tmod + chr3R 30560460 intron tmod + chr3R_6_30560001 chr3R_30560001 RAL-306_75b 897 chr3R 30592515 30592535 chr3R 30592625 30592645 4 109 1.0 2.5 1.8 1.4 130 chr3R 30592515 intergenic CG2246 - chr3R 30592580 intergenic CG2246 - chr3R 30592645 intergenic CG2246 - chr3R_4_30590001 chr3R_30590001 RAL-306_75b 898 chr3R 30850243 30850269 chr3R 30850335 30850361 5 92 0.5 1.0 0.8 2.8 118 chr3R 30850243 intergenic not near genes chr3R 30850302 intergenic not near genes chr3R 30850361 intergenic not near genes chr3R_5_30850001 chr3R_30850001 RAL-306_75b 899 chr3R 30937290 30937303 chr3R 30937461 30937474 7 171 1.0 0.5 0.8 3.9 184 chr3R 30937290 intergenic CG15550 - chr3R 30937382 intergenic CG15550 - chr3R 30937474 intergenic CG15550 - chr3R_7_30935001 chr3R_30935001 RAL-306_75b 900 chr3R 31093359 31093360 chr3R 31093439 31093440 4 80 0.5 4.5 2.5 1.1 81 chr3R 31093359 intron CG11317 - chr3R 31093400 intron CG11317 - chr3R 31093440 intron CG11317 - chr3R_4_31090001 chr3R_31090001 RAL-306_75b 901 chr3R 31413089 31413123 chr3R 31418289 31418323 copia 5 5200 0.5 0.0 0.2 4.2 5234 chr3R 31413089 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418323 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-306_75b 902 chr3R 31435367 31435387 chr3R 31435519 31435539 5 152 0.5 1.0 0.8 2.8 172 chr3R 31435367 intron Gprk2 + chr3R 31435453 intron Gprk2 + chr3R 31435539 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 RAL-306_75b 903 chr3R 31482369 31482397 chr3R 31482448 31482475 4 79 1.5 0.0 0.8 2.2 106 chr3R 31482369 intergenic not near genes chr3R 31482422 intergenic not near genes chr3R 31482475 intergenic not near genes chr3R_4_31480001 chr3R_31480001 RAL-306_75b 904 chr3R 31530822 31530843 chr3R 31531147 31531170 5 326 0.0 1.5 0.8 2.8 348 chr3R 31530822 intergenic not near genes chr3R 31530996 intergenic not near genes chr3R 31531170 intergenic not near genes chr3R_5_31530001 chr3R_31530001 RAL-306_75b 905 chr3R 31610115 31610142 chr3R 31610201 31610228 10 86 1.0 0.5 0.8 5.6 113 chr3R 31610115 intron CycG - chr3R 31610172 intron CycG - chr3R 31610228 intron CycG - chr3R_10_31610001 chr3R_31610001 RAL-306_75b 906 chr3R 31615166 31615182 chr3R 31615341 31615355 9 175 1.5 1.5 1.5 3.6 189 chr3R 31615166 3` UTR Med + chr3R 31615260 3` UTR Med + chr3R 31615355 3` UTR,3` UTR Med +,CG11539 - chr3R_9_31615001 chr3R_31615001 RAL-306_75b 907 chr3R 31691532 31691562 chr3R 31696298 31696325 Doc 7 4766 1.5 0.5 1.0 3.5 4793 chr3R 31691532 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696325 intergenic not near genes chr3R_7_31690001 chr3R_31690001 RAL-306_75b 908 chr3R 31961358 31961365 chr3R 31961441 31961444 4 82 2.0 0.0 1.0 2.0 86 chr3R 31961358 intron heph - chr3R 31961401 intron heph - chr3R 31961444 intron heph - chr3R_4_31960001 chr3R_31960001 RAL-306_75b 909 chr3R 31967508 31967511 chr3R 31967977 31967981 INE-1 5 470 1.0 5.0 3.0 1.2 473 chr3R 31967508 intron heph - chr3R 31967744 intron heph - chr3R 31967981 intron heph - chr3R_5_31965001 chr3R_31965001 RAL-306_75b 910 chr3R 31997999 31998007 chr3R 32005469 32005474 blood 8 7470 2.0 2.0 2.0 2.7 7475 chr3R 31997999 intron heph - chr3R 32001736 intron heph - chr3R 32005474 intron heph - chr3R_8_32000001 chr3R_32000001 RAL-306_75b 911 chr3R 32014856 32014876 chr3R 32015129 32015150 4 274 1.5 1.5 1.5 1.6 294 chr3R 32014856 5` UTR heph - chr3R 32015003 5` UTR heph - chr3R 32015150 5` UTR heph - chr3R_4_32015001 chr3R_32015001 RAL-306_75b 912 chr4 257406 257426 chr4 257576 257596 6 170 4.0 0.5 2.2 1.9 190 chr4 257406 intron RhoGAP102A + chr4 257501 intron RhoGAP102A + chr4 257596 intron RhoGAP102A + chr4_6_255001 chr4_255001 RAL-306_75b 913 chr4 726668 726686 chr4 726757 726776 6 90 1.0 1.5 1.2 2.7 108 chr4 726668 intron bt + chr4 726722 intron bt + chr4 726776 intron bt + chr4_6_725001 chr4_725001 RAL-306_75b 914 chr4 959623 959655 chr4 959802 959834 8 179 0.0 0.5 0.2 6.7 211 chr4 959623 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959834 5` UTR CR44030 + chr4_8_955001 chr4_955001 RAL-306_75b 915 chrX 551429 551447 chrX 558991 559009 412 7 7561 0.0 2.5 1.2 3.2 7580 chrX 551429 intron Appl + chrX 555219 intron Appl + chrX 559009 intron Appl + chrX_7_555001 chrX_555001 RAL-306_75b 916 chrX 609885 609920 chrX 609977 610001 10 91 1.5 1.0 1.2 4.5 116 chrX 609885 intron CG13366 - chrX 609943 intron CG13366 - chrX 610001 intron CG13366 - chrX_10_605001 chrX_605001 RAL-306_75b 917 chrX 827602 827630 chrX 835394 835422 roo 11 7791 3.5 2.0 2.8 2.9 7820 chrX 827602 intron CG43867 - chrX 831512 intron CG43867 - chrX 835422 intron CG43867 - chrX_11_830001 chrX_830001 RAL-306_75b 918 chrX 1051074 1051092 chrX 1051152 1051170 4 78 1.5 3.0 2.2 1.2 96 chrX 1051074 intron CR44779 + chrX 1051122 intron CR44779 + chrX 1051170 intron CR44779 + chrX_4_1050001 chrX_1050001 RAL-306_75b 919 chrX 1053117 1053123 chrX 16983076 16983076 10 15929958 5.5 6.5 6.0 1.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_10_9015001 chrX_9015001 RAL-306_75b 920 chrX 1191950 1191960 chrX 1192026 1192036 4 76 2.5 1.5 2.0 1.3 86 chrX 1191950 intron CG11380 + chrX 1191993 intron CG11380 + chrX 1192036 intron CG11380 + chrX_4_1190001 chrX_1190001 RAL-306_75b 921 chrX 1560659 1560687 chrX 1560751 1560780 4 92 0.0 0.0 0.0 4.0 121 chrX 1560659 intron Mur2B - chrX 1560720 intron Mur2B - chrX 1560780 intron Mur2B - chrX_4_1560001 chrX_1560001 RAL-306_75b 922 chrX 1930540 1930567 chrX 1938111 1938137 opus 8 7570 0.0 0.0 0.0 8.0 7597 chrX 1930540 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938137 3` UTR CG3857 - chrX_8_1930001 chrX_1930001 RAL-306_75b 923 chrX 2578821 2578828 chrX 2578913 2578920 5 92 2.0 1.5 1.8 1.8 99 chrX 2578821 intergenic Pdfr +,Vha36-3 - chrX 2578870 intergenic Vha36-3 -,Pdfr + chrX 2578920 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-306_75b 924 chrX 3116734 3116763 chrX 3117381 3117409 6 647 2.0 2.0 2.0 2.0 675 chrX 3116734 intron kirre + chrX 3117072 intron kirre + chrX 3117409 intron kirre + chrX_6_3115001 chrX_3115001 RAL-306_75b 925 chrX 3306343 3306369 chrX 3306425 3306451 7 82 3.5 0.5 2.0 2.3 108 chrX 3306343 intron dnc + chrX 3306397 intron dnc + chrX 3306451 intron dnc + chrX_7_3305001 chrX_3305001 RAL-306_75b 926 chrX 3513759 3513789 chrX 3513842 3513872 4 83 0.0 0.0 0.0 4.0 113 chrX 3513759 intron,intron CR44999 +,CG32791 - chrX 3513816 intron,intron CR44999 +,CG32791 - chrX 3513872 intron,intron CR44999 +,CG32791 - chrX_4_3510001 chrX_3510001 RAL-306_75b 927 chrX 3597553 3597561 chrX 3619720 3619729 roo 4 22167 2.0 0.5 1.2 1.8 22176 chrX 3597553 intron AstA-R1 + chrX 3608641 intron AstA-R1 + chrX 3619729 intron AstA-R1 + chrX_4_3605001 chrX_3605001 RAL-306_75b 928 chrX 3657424 3657437 chrX 3657504 3657517 4 80 0.0 1.0 0.5 2.7 93 chrX 3657424 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657517 intron AstA-R1 + chrX_4_3655001 chrX_3655001 RAL-306_75b 929 chrX 4047471 4047500 chrX 4047584 4047612 4 113 1.0 0.0 0.5 2.7 141 chrX 4047471 intergenic CR45482 - chrX 4047542 intergenic CR45482 - chrX 4047612 3` UTR CR45482 - chrX_4_4045001 chrX_4045001 RAL-306_75b 930 chrX 4763258 4763277 chrX 4763746 4763765 Stalker4 5 488 0.0 2.0 1.0 2.5 507 chrX 4763258 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763765 intergenic not near genes chrX_5_4760001 chrX_4760001 RAL-306_75b 931 chrX 4859880 4859910 chrX 4859989 4860019 8 109 0.0 0.0 0.0 8.0 139 chrX 4859880 intron CG42594 + chrX 4859950 intron CG42594 + chrX 4860019 intron CG42594 + chrX_8_4855001 chrX_4855001 RAL-306_75b 932 chrX 4902652 4902677 chrX 4902733 4902758 4 81 1.0 1.0 1.0 2.0 106 chrX 4902652 intron CG42594 + chrX 4902705 intron CG42594 + chrX 4902758 intron CG42594 + chrX_4_4900001 chrX_4900001 RAL-306_75b 933 chrX 5096283 5096298 chrX 5103845 5103863 springer 4 7564 0.0 2.0 1.0 2.0 7580 chrX 5096283 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103863 intron,intron CG15465 +,rg + chrX_4_5100001 chrX_5100001 RAL-306_75b 934 chrX 5272827 5272839 chrX 5272913 5272926 7 86 1.0 3.0 2.0 2.3 99 chrX 5272827 intergenic not near genes chrX 5272876 intergenic not near genes chrX 5272926 intergenic not near genes chrX_7_5270001 chrX_5270001 RAL-306_75b 935 chrX 5883810 5883833 chrX 5884051 5884072 pogo 6 241 0.0 0.5 0.2 5.0 262 chrX 5883810 intron CR45668 - chrX 5883941 intron CR45668 - chrX 5884072 intron CR45668 - chrX_6_5880001 chrX_5880001 RAL-306_75b 936 chrX 5884162 5884187 chrX 5884403 5884428 pogo 8 241 2.5 0.5 1.5 3.2 266 chrX 5884162 intron CR45668 - chrX 5884295 intron CR45668 - chrX 5884428 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-306_75b 937 chrX 6118696 6118730 chrX 6118778 6118812 7 82 1.5 1.5 1.5 2.8 116 chrX 6118696 intron Ca-alpha1T - chrX 6118754 intron Ca-alpha1T - chrX 6118812 intron Ca-alpha1T - chrX_7_6115001 chrX_6115001 RAL-306_75b 938 chrX 6865789 6865791 chrX 6865870 6865871 5 80 0.0 0.5 0.2 4.2 82 chrX 6865789 intron CG14434 - chrX 6865830 intron CG14434 - chrX 6865871 intron CG14434 - chrX_5_6865001 chrX_6865001 RAL-306_75b 939 chrX 6897578 6897583 chrX 7243774 7243779 4 346196 3.5 1.0 2.2 1.2 346201 chrX 6897578 intergenic not near genes chrX 7070678 exon CG4607 + chrX 7243779 intron CR44357 - chrX_4_7070001 chrX_7070001 RAL-306_75b 940 chrX 7023604 7023629 chrX 7030994 7031018 Tabor 5 7390 0.5 0.0 0.2 4.2 7414 chrX 7023604 intron CG12541 - chrX 7027311 intron CG12541 - chrX 7031018 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-306_75b 941 chrX 7125252 7125263 chrX 7134411 7134422 roo 6 9158 0.0 3.0 1.5 2.4 9170 chrX 7125252 intergenic not near genes chrX 7129837 intergenic not near genes chrX 7134422 intergenic not near genes chrX_6_7125001 chrX_7125001 RAL-306_75b 942 chrX 7679865 7679878 chrX 7680483 7680496 4 618 4.5 10.5 7.5 0.5 631 chrX 7679865 intergenic CR45666 -,CR45667 - chrX 7680180 3` UTR CR45666 - chrX 7680496 3` UTR CR45666 - chrX_4_7680001 chrX_7680001 RAL-306_75b 943 chrX 7702904 7702927 chrX 7703343 7703366 jockey 6 439 3.5 0.0 1.8 2.1 462 chrX 7702904 intron CHES-1-like - chrX 7703135 intron CHES-1-like - chrX 7703366 intron CHES-1-like - chrX_6_7700001 chrX_7700001 RAL-306_75b 944 chrX 7832440 7832464 chrX 7832529 7832553 5 89 0.5 1.5 1.0 2.5 113 chrX 7832440 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832553 intron CG1402 + chrX_5_7830001 chrX_7830001 RAL-306_75b 945 chrX 8364836 8364863 chrX 8365240 8365267 BS 5 404 2.0 3.0 2.5 1.4 431 chrX 8364836 intron nAChRalpha3 - chrX 8365052 intron nAChRalpha3 - chrX 8365267 intron nAChRalpha3 - chrX_5_8365001 chrX_8365001 RAL-306_75b 946 chrX 8506043 8506057 chrX 8506121 8506135 4 78 1.5 3.5 2.5 1.1 92 chrX 8506043 intron CG33181 + chrX 8506089 intron CG33181 + chrX 8506135 intron CG33181 + chrX_4_8505001 chrX_8505001 RAL-306_75b 947 chrX 8506541 8506559 chrX 8506749 8506767 4 208 0.5 0.5 0.5 2.7 226 chrX 8506541 intron CG33181 + chrX 8506654 intron CG33181 + chrX 8506767 intron CG33181 + chrX_4_8505001 chrX_8505001 RAL-306_75b 948 chrX 8834837 8834860 chrX 8834916 8834938 5 78 0.0 0.0 0.0 5.0 101 chrX 8834837 intergenic CR45537 + chrX 8834888 intergenic CR45537 + chrX 8834938 intergenic CR45537 + chrX_5_8830001 chrX_8830001 RAL-306_75b 949 chrX 8927597 8927617 chrX 8929866 8929887 NOF 4 2270 0.0 0.0 0.0 4.0 2290 chrX 8927597 intron rdgA + chrX 8928742 intron rdgA + chrX 8929887 intron rdgA + chrX_4_8925001 chrX_8925001 RAL-306_75b 950 chrX 9508147 9508168 chrX 9509665 9509686 jockey 7 1518 0.5 0.5 0.5 4.7 1539 chrX 9508147 intron CG32700 - chrX 9508916 intron CG32700 - chrX 9509686 intron CG32700 - chrX_7_9505001 chrX_9505001 RAL-306_75b 951 chrX 9530398 9530411 chrX 9530500 9530514 6 102 0.5 0.5 0.5 4.0 116 chrX 9530398 intron CG32700 - chrX 9530456 intron CG32700 - chrX 9530514 intron CG32700 - chrX_6_9530001 chrX_9530001 RAL-306_75b 952 chrX 9791868 9791885 chrX 9791965 9791982 7 97 1.0 0.0 0.5 4.7 114 chrX 9791868 intron CG32698 + chrX 9791925 intron CG32698 + chrX 9791982 intron CG32698 + chrX_7_9790001 chrX_9790001 RAL-306_75b 953 chrX 9839376 9839381 chrX 9839458 9839462 4 82 0.0 2.5 1.2 1.8 86 chrX 9839376 intron CG32698 + chrX 9839419 intron CG32698 + chrX 9839462 intron CG32698 + chrX_4_9835001 chrX_9835001 RAL-306_75b 954 chrX 10267316 10267330 chrX 10276466 10276480 roo 4 9150 0.5 0.0 0.2 3.3 9164 chrX 10267316 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276480 3` UTR alpha-Man-I - chrX_4_10270001 chrX_10270001 RAL-306_75b 955 chrX 10317557 10317566 chrX 10317635 10317644 6 78 1.0 1.5 1.2 2.7 87 chrX 10317557 intron alpha-Man-I - chrX 10317600 intron alpha-Man-I - chrX 10317644 intron alpha-Man-I - chrX_6_10315001 chrX_10315001 RAL-306_75b 956 chrX 10550336 10550357 chrX 10550414 10550435 9 78 2.5 2.0 2.2 2.8 99 chrX 10550336 intron spri - chrX 10550386 intron spri - chrX 10550435 intron spri - chrX_9_10550001 chrX_10550001 RAL-306_75b 957 chrX 11544252 11544266 chrX 11544360 11544371 4 107 1.0 1.0 1.0 2.0 119 chrX 11544252 intron Drak + chrX 11544312 intron Drak + chrX 11544371 intron Drak + chrX_4_11540001 chrX_11540001 RAL-306_75b 958 chrX 11719877 11719902 chrX 11719957 11719982 5 80 1.5 2.0 1.8 1.8 105 chrX 11719877 3` UTR prtp + chrX 11719930 intergenic prtp +,Tango10 + chrX 11719982 intergenic prtp +,Tango10 + chrX_5_11715001 chrX_11715001 RAL-306_75b 959 chrX 12038093 12038112 chrX 12038284 12038306 9 193 1.0 0.5 0.8 5.0 213 chrX 12038093 intergenic not near genes chrX 12038200 intergenic not near genes chrX 12038306 intergenic not near genes chrX_9_12035001 chrX_12035001 RAL-306_75b 960 chrX 12168137 12168151 chrX 12173579 12173592 I-element 4 5442 1.0 0.0 0.5 2.7 5455 chrX 12168137 intron Ten-a + chrX 12170864 intron Ten-a + chrX 12173592 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-306_75b 961 chrX 12194945 12194959 chrX 12195063 12195077 5 117 4.0 1.0 2.5 1.4 132 chrX 12194945 intron Ten-a + chrX 12195011 intron Ten-a + chrX 12195077 intron Ten-a + chrX_5_12195001 chrX_12195001 RAL-306_75b 962 chrX 12241190 12241217 chrX 12241272 12241299 8 81 1.5 0.0 0.8 4.4 109 chrX 12241190 intron Ten-a + chrX 12241244 intron Ten-a + chrX 12241299 intron Ten-a + chrX_8_12240001 chrX_12240001 RAL-306_75b 963 chrX 12301964 12301983 chrX 12303265 12303289 X-element 5 1305 0.0 0.0 0.0 5.0 1325 chrX 12301964 intron Ten-a + chrX 12302626 intron Ten-a + chrX 12303289 intron Ten-a + chrX_5_12300001 chrX_12300001 RAL-306_75b 964 chrX 12350783 12350803 chrX 12350864 12350884 6 80 0.5 0.0 0.2 5.0 101 chrX 12350783 intergenic not near genes chrX 12350834 intergenic not near genes chrX 12350884 intergenic not near genes chrX_6_12350001 chrX_12350001 RAL-306_75b 965 chrX 12428346 12428360 chrX 12428456 12428472 5 110 2.5 2.0 2.2 1.6 126 chrX 12428346 intergenic not near genes chrX 12428409 intergenic not near genes chrX 12428472 intergenic not near genes chrX_5_12425001 chrX_12425001 RAL-306_75b 966 chrX 12752283 12752305 chrX 12752370 12752392 9 87 2.5 3.5 3.0 2.2 109 chrX 12752283 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752392 5` UTR CR44619 + chrX_9_12750001 chrX_12750001 RAL-306_75b 967 chrX 12953892 12953919 chrX 12954030 12954057 4 138 0.0 0.5 0.2 3.3 165 chrX 12953892 intron hec - chrX 12953974 intron hec - chrX 12954057 intron hec - chrX_4_12950001 chrX_12950001 RAL-306_75b 968 chrX 13146597 13146615 chrX 13146685 13146703 5 88 0.5 2.0 1.2 2.3 106 chrX 13146597 intron CG32645 + chrX 13146650 intron CG32645 + chrX 13146703 intron CG32645 + chrX_5_13145001 chrX_13145001 RAL-306_75b 969 chrX 13236888 13236896 chrX 13236973 13236980 5 85 0.0 2.0 1.0 2.5 92 chrX 13236888 intron mew - chrX 13236934 intron mew - chrX 13236980 intron mew - chrX_5_13235001 chrX_13235001 RAL-306_75b 970 chrX 13463648 13463666 chrX 13469224 13469243 mdg3 5 5577 2.0 2.5 2.2 1.6 5595 chrX 13463648 intron Neto + chrX 13466446 intron Neto + chrX 13469243 intron Neto + chrX_5_13465001 chrX_13465001 RAL-306_75b 971 chrX 13484830 13484841 chrX 13484927 13484938 4 96 1.5 0.5 1.0 2.0 108 chrX 13484830 intron Neto + chrX 13484884 intron Neto + chrX 13484938 intron Neto + chrX_4_13480001 chrX_13480001 RAL-306_75b 972 chrX 13934300 13934317 chrX 13934383 13934400 4 83 1.0 1.5 1.2 1.8 100 chrX 13934300 intron mamo - chrX 13934350 intron mamo - chrX 13934400 intron mamo - chrX_4_13930001 chrX_13930001 RAL-306_75b 973 chrX 14188072 14188107 chrX 14188155 14188190 5 83 1.0 1.0 1.0 2.5 118 chrX 14188072 intergenic CG12481 + chrX 14188131 intergenic CG12481 + chrX 14188190 intergenic CG12481 + chrX_5_14185001 chrX_14185001 RAL-306_75b 974 chrX 14407270 14407272 chrX 14407352 14407354 4 82 0.0 0.0 0.0 4.0 84 chrX 14407270 intron dpr8 + chrX 14407312 intron dpr8 + chrX 14407354 intron dpr8 + chrX_4_14405001 chrX_14405001 RAL-306_75b 975 chrX 14411281 14411291 chrX 14411359 14411368 4 78 0.0 2.5 1.2 1.8 87 chrX 14411281 intron dpr8 + chrX 14411324 intron dpr8 + chrX 14411368 intron dpr8 + chrX_4_14410001 chrX_14410001 RAL-306_75b 976 chrX 14636466 14636491 chrX 14641907 14641932 I-element 5 5441 0.5 2.0 1.2 2.3 5466 chrX 14636466 intron NetA - chrX 14639199 intron NetA - chrX 14641932 intron NetA - chrX_5_14635001 chrX_14635001 RAL-306_75b 977 chrX 14818769 14818788 chrX 14823973 14823992 copia 4 5204 1.5 1.5 1.5 1.6 5223 chrX 14818769 intron rut - chrX 14821380 intron rut - chrX 14823992 intron rut - chrX_4_14820001 chrX_14820001 RAL-306_75b 978 chrX 14936873 14936885 chrX 14946130 14946142 roo 6 9257 0.0 1.0 0.5 4.0 9269 chrX 14936873 intron pdgy - chrX 14941508 intron pdgy - chrX 14946142 intron pdgy - chrX_6_14940001 chrX_14940001 RAL-306_75b 979 chrX 15228500 15228507 chrX 15228740 15228753 4 244 1.0 0.0 0.5 2.7 253 chrX 15228500 intergenic CG9101 - chrX 15228626 intergenic CG9101 - chrX 15228753 3` UTR CG9101 - chrX_4_15225001 chrX_15225001 RAL-306_75b 980 chrX 15413049 15413085 chrX 15417351 15417387 Juan 6 4302 3.0 2.5 2.8 1.6 4338 chrX 15413049 intron Cngl - chrX 15415218 intron Cngl - chrX 15417387 intron Cngl - chrX_6_15415001 chrX_15415001 RAL-306_75b 981 chrX 15959555 15959562 chrX 15959643 15959650 5 88 1.5 1.0 1.2 2.3 95 chrX 15959555 intron mmd - chrX 15959602 intron mmd - chrX 15959650 intron mmd - chrX_5_15955001 chrX_15955001 RAL-306_75b 982 chrX 16295536 16295548 chrX 16295617 16295632 7 83 0.0 0.0 0.0 7.0 96 chrX 16295536 intron CG9911 - chrX 16295584 intron CG9911 - chrX 16295632 intron CG9911 - chrX_7_16295001 chrX_16295001 RAL-306_75b 983 chrX 16492656 16492674 chrX 16498233 16498251 mdg3 5 5577 0.0 0.0 0.0 5.0 5595 chrX 16492656 intron para - chrX 16495454 intron para - chrX 16498251 intron para - chrX_5_16495001 chrX_16495001 RAL-306_75b 984 chrX 16650928 16650935 chrX 16651005 16651012 6 77 3.0 0.0 1.5 2.4 84 chrX 16650928 intergenic CG32573 +,CG42512 + chrX 16650970 intergenic CG32573 +,CG42512 + chrX 16651012 intergenic CG32573 +,CG42512 + chrX_6_16650001 chrX_16650001 RAL-306_75b 985 chrX 16689627 16689654 chrX 16689713 16689739 6 86 2.0 0.0 1.0 3.0 112 chrX 16689627 intron Sep4 - chrX 16689683 intron Sep4 - chrX 16689739 intron Sep4 - chrX_6_16685001 chrX_16685001 RAL-306_75b 986 chrX 17122640 17122673 chrX 17122730 17122763 5 90 0.5 0.0 0.2 4.2 123 chrX 17122640 intron CG5004 + chrX 17122702 intron CG5004 + chrX 17122763 intron CG5004 + chrX_5_17120001 chrX_17120001 RAL-306_75b 987 chrX 17352597 17352624 chrX 17352700 17352727 6 103 0.0 0.0 0.0 6.0 130 chrX 17352597 intergenic not near genes chrX 17352662 intergenic not near genes chrX 17352727 intergenic not near genes chrX_6_17350001 chrX_17350001 RAL-306_75b 988 chrX 17766360 17766378 chrX 17766456 17766476 4 98 1.5 0.5 1.0 2.0 116 chrX 17766360 intergenic not near genes chrX 17766418 intergenic not near genes chrX 17766476 intergenic not near genes chrX_4_17765001 chrX_17765001 RAL-306_75b 989 chrX 17867043 17867074 chrX 17867119 17867149 5 76 0.5 2.0 1.2 2.3 106 chrX 17867043 intron mnb - chrX 17867096 intron mnb - chrX 17867149 intron mnb - chrX_5_17865001 chrX_17865001 RAL-306_75b 990 chrX 18122821 18122851 chrX 18122897 18122927 10 76 1.5 2.0 1.8 3.6 106 chrX 18122821 5` UTR CR45606 + chrX 18122874 5` UTR CR45606 + chrX 18122927 intergenic CR45606 + chrX_10_18120001 chrX_18120001 RAL-306_75b 991 chrX 18194070 18194091 chrX 18194605 18194626 BS 7 534 2.5 1.5 2.0 2.3 556 chrX 18194070 intron Frq2 + chrX 18194348 intron Frq2 + chrX 18194626 intron Frq2 + chrX_7_18190001 chrX_18190001 RAL-306_75b 992 chrX 18427384 18427408 chrX 18427795 18427819 5 411 1.0 0.5 0.8 2.8 435 chrX 18427384 intergenic CG42323 + chrX 18427602 intergenic not near genes chrX 18427819 intergenic not near genes chrX_5_18425001 chrX_18425001 RAL-306_75b 993 chrX 18429499 18429522 chrX 18434810 18434833 Transpac 5 5311 2.0 2.5 2.2 1.6 5334 chrX 18429499 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434833 intergenic not near genes chrX_5_18430001 chrX_18430001 RAL-306_75b 994 chrX 18441019 18441021 chrX 18441109 18441112 5 92 4.5 0.5 2.5 1.4 93 chrX 18441019 intergenic CG32548 - chrX 18441066 intergenic CG32548 - chrX 18441112 intergenic not near genes chrX_5_18440001 chrX_18440001 RAL-306_75b 995 chrX 18474319 18474340 chrX 18474402 18474423 9 82 0.5 0.0 0.2 7.5 104 chrX 18474319 intron CG32547 - chrX 18474371 intron CG32547 - chrX 18474423 intron CG32547 - chrX_9_18470001 chrX_18470001 RAL-306_75b 996 chrX 18817938 18817943 chrX 18818026 18818031 6 88 2.5 3.0 2.8 1.6 93 chrX 18817938 intron CG42450 + chrX 18817984 intron CG42450 + chrX 18818031 intron CG42450 + chrX_6_18815001 chrX_18815001 RAL-306_75b 997 chrX 18896529 18896542 chrX 18896640 18896653 6 111 0.0 0.5 0.2 5.0 124 chrX 18896529 3` UTR CG7349 + chrX 18896591 intergenic CG7349 + chrX 18896653 intergenic CG7349 + chrX_6_18895001 chrX_18895001 RAL-306_75b 998 chrX 18896909 18896923 chrX 18896986 18896999 5 77 1.5 0.5 1.0 2.5 90 chrX 18896909 intergenic CG7349 + chrX 18896954 intergenic CG7349 + chrX 18896999 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-306_75b 999 chrX 19060412 19060437 chrX 19065196 19065221 Doc 6 4784 0.5 3.0 1.8 2.1 4809 chrX 19060412 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065221 intron CG14190 + chrX_6_19060001 chrX_19060001 RAL-306_75b 1000 chrX 19136552 19136579 chrX 19143472 19143498 412 4 6920 0.0 0.0 0.0 4.0 6946 chrX 19136552 intergenic not near genes chrX 19140025 intergenic not near genes chrX 19143498 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-306_75b 1001 chrX 13057298 13057300 chrX 19242812 19242814 16 6185514 8.0 6.5 7.2 2.0 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_16_16150001 chrX_16150001 RAL-306_75b 1002 chrX 19380158 19380187 chrX 19380399 19380428 pogo 6 241 0.0 0.5 0.2 5.0 270 chrX 19380158 intron kek5 + chrX 19380293 intron kek5 + chrX 19380428 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-306_75b 1003 chrX 19542144 19542164 chrX 19542242 19542262 6 98 1.0 1.0 1.0 3.0 118 chrX 19542144 intron CG32532 - chrX 19542203 intron CG32532 - chrX 19542262 intron CG32532 - chrX_6_19540001 chrX_19540001 RAL-306_75b 1004 chrX 19883766 19883796 chrX 19883851 19883881 9 84 0.5 0.0 0.2 7.5 115 chrX 19883766 intron Hers + chrX 19883824 intron Hers + chrX 19883881 intron Hers + chrX_9_19880001 chrX_19880001 RAL-306_75b 1005 chrX 20041532 20041559 chrX 20041612 20041639 6 80 1.0 1.0 1.0 3.0 107 chrX 20041532 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041639 intron Dop2R - chrX_6_20040001 chrX_20040001 RAL-306_75b 1006 chrX 20103959 20103989 chrX 20104049 20104079 4 89 0.0 1.5 0.8 2.2 120 chrX 20103959 intergenic not near genes chrX 20104019 intergenic not near genes chrX 20104079 intergenic not near genes chrX_4_20100001 chrX_20100001 RAL-306_75b 1007 chrX 20312882 20312902 chrX 20312960 20312980 4 78 1.0 0.0 0.5 2.7 98 chrX 20312882 intron CG1504 - chrX 20312931 intron CG1504 - chrX 20312980 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-306_75b 1008 chrX 20369327 20369342 chrX 20369411 20369426 4 84 0.5 2.5 1.5 1.6 99 chrX 20369327 intergenic not near genes chrX 20369376 intergenic not near genes chrX 20369426 intergenic not near genes chrX_4_20365001 chrX_20365001 RAL-306_75b 1009 chrX 20426181 20426187 chrX 20428375 20428381 4 2194 8.0 5.5 6.8 0.5 2200 chrX 20426181 exon cactin + chrX 20427281 intergenic CG11710 -,CG15456 - chrX 20428381 exon CG11710 - chrX_4_20425001 chrX_20425001 RAL-306_75b 1010 chrX 20560256 20560263 chrX 20560356 20560363 5 99 1.5 0.5 1.0 2.5 107 chrX 20560256 intron RunxB + chrX 20560310 intron RunxB + chrX 20560363 intron RunxB + chrX_5_20560001 chrX_20560001 RAL-306_75b 1011 chrX 20814195 20814227 chrX 20814289 20814321 7 94 0.5 1.0 0.8 3.9 126 chrX 20814195 intron shakB - chrX 20814258 intron shakB - chrX 20814321 intron shakB - chrX_7_20810001 chrX_20810001 RAL-306_75b 1012 chrX 21268070 21268084 chrX 21268151 21268165 4 81 0.5 1.5 1.0 2.0 95 chrX 21268070 intron CG32521 - chrX 21268118 intron CG32521 - chrX 21268165 intron CG32521 - chrX_4_21265001 chrX_21265001 RAL-306_75b 1013 chrX 21573895 21573905 chrX 21573982 21573992 4 87 0.5 1.0 0.8 2.2 97 chrX 21573895 intergenic not near genes chrX 21573944 intergenic not near genes chrX 21573992 intergenic not near genes chrX_4_21570001 chrX_21570001 RAL-306_75b 1014 chrX 22824235 22824428 chrX 22824361 22824561 6 131 1.5 0.0 0.8 3.3 326 chrX 22824235 intergenic fog - chrX 22824398 3` UTR fog - chrX 22824561 3` UTR fog - chrX_6_22820001 chrX_22820001 RAL-306_75b 1015 chrX 22987108 22987127 chrX 22989766 22989786 Burdock 4 2659 0.0 2.5 1.2 1.8 2678 chrX 22987108 intron,intron stnA -,stnB - chrX 22988447 intron,intron stnA -,stnB - chrX 22989786 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-306_75b