SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 12953 13024 chr2L 13247 13318 31 294 67.0 71.5 69.2 0.4 365 chr2L 12953 intron l(2)gl - chr2L 13136 intron l(2)gl - chr2L 13318 intron l(2)gl - chr2L_31_10001 chr2L_10001 RAL-306_125b 2 chr2L 47423 47480 chr2L 52578 52635 jockey 20 5154 7.5 13.0 10.2 1.8 5212 chr2L 47423 intron Cda5 - chr2L 50029 intron Cda5 - chr2L 52635 intron Cda5 - chr2L_20_50001 chr2L_50001 RAL-306_125b 3 chr2L 171982 172048 chr2L 172142 172198 29 158 8.0 9.5 8.8 3.0 216 chr2L 171982 intron spen + chr2L 172090 intron spen + chr2L 172198 intron spen + chr2L_29_170001 chr2L_170001 RAL-306_125b 4 chr2L 259337 259384 chr2L 259468 259514 13 130 11.0 9.0 10.0 1.2 177 chr2L 259337 intron CG3645 - chr2L 259426 intron CG3645 - chr2L 259514 intron CG3645 - chr2L_13_255001 chr2L_255001 RAL-306_125b 5 chr2L 297643 297714 chr2L 297793 297864 24 149 8.0 5.0 6.5 3.2 221 chr2L 297643 intergenic Hop +,Pi3K21B + chr2L 297754 intergenic Pi3K21B +,Hop + chr2L 297864 intergenic Pi3K21B +,Hop + chr2L_24_295001 chr2L_295001 RAL-306_125b 6 chr2L 312781 312853 chr2L 312910 312982 21 128 6.5 8.5 7.5 2.5 201 chr2L 312781 intron Plc21C + chr2L 312882 intron Plc21C + chr2L 312982 intron Plc21C + chr2L_21_310001 chr2L_310001 RAL-306_125b 7 chr2L 323410 323422 chr2L 323538 323550 4 128 17.5 10.0 13.8 0.3 140 chr2L 323410 intron Plc21C + chr2L 323480 intron Plc21C + chr2L 323550 intron Plc21C + chr2L_4_320001 chr2L_320001 RAL-306_125b 8 chr2L 323423 323483 chr2L 323537 323608 23 122 7.5 9.5 8.5 2.4 185 chr2L 323423 intron Plc21C + chr2L 323516 intron Plc21C + chr2L 323608 intron Plc21C + chr2L_23_320001 chr2L_320001 RAL-306_125b 9 chr2L 325093 325143 chr2L 325220 325270 8 120 8.5 10.0 9.2 0.8 177 chr2L 325093 intron Plc21C + chr2L 325182 intron Plc21C + chr2L 325270 intron Plc21C + chr2L_8_325001 chr2L_325001 RAL-306_125b 10 chr2L 347841 347912 chr2L 355391 355462 blood 28 7548 7.0 6.5 6.8 3.6 7621 chr2L 347841 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355462 3` UTR Plc21C + chr2L_28_350001 chr2L_350001 RAL-306_125b 11 chr2L 358772 358818 chr2L 358898 358940 9 113 10.0 7.5 8.8 0.9 168 chr2L 358772 intergenic not near genes chr2L 358856 intergenic not near genes chr2L 358940 intergenic not near genes chr2L_9_355001 chr2L_355001 RAL-306_125b 12 chr2L 371392 371455 chr2L 371521 371584 18 129 8.0 7.5 7.8 2.0 192 chr2L 371392 intergenic not near genes chr2L 371488 intergenic not near genes chr2L 371584 intergenic not near genes chr2L_18_370001 chr2L_370001 RAL-306_125b 13 chr2L 407906 407971 chr2L 408037 408097 26 129 9.5 6.5 8.0 2.9 191 chr2L 407906 3` UTR RpI135 + chr2L 408002 intergenic AP-2alpha -,RpI135 + chr2L 408097 3` UTR AP-2alpha - chr2L_26_405001 chr2L_405001 RAL-306_125b 14 chr2L 467325 467485 chr2L 467474 467598 25 150 1.0 0.5 0.8 13.9 273 chr2L 467325 intron CG4297 - chr2L 467462 intron CG4297 - chr2L 467598 intron CG4297 - chr2L_25_465001 chr2L_465001 RAL-306_125b 15 chr2L 581748 581770 chr2L 581832 581834 4 88 3.0 1.0 2.0 1.3 86 chr2L 581748 intergenic not near genes chr2L 581791 intergenic not near genes chr2L 581834 intergenic not near genes chr2L_4_580001 chr2L_580001 RAL-306_125b 16 chr2L 602218 602274 chr2L 602381 602437 19 160 7.5 13.0 10.2 1.7 219 chr2L 602218 intergenic not near genes chr2L 602328 intergenic CG13689 + chr2L 602437 intergenic CG13689 + chr2L_19_600001 chr2L_600001 RAL-306_125b 17 chr2L 666235 666305 chr2L 666361 666450 19 121 2.0 1.0 1.5 7.6 215 chr2L 666235 intron ds - chr2L 666342 intron ds - chr2L 666450 intron ds - chr2L_19_665001 chr2L_665001 RAL-306_125b 18 chr2L 686920 686940 chr2L 695958 696027 roo 8 9080 10.0 6.0 8.0 0.9 9107 chr2L 686920 intron ds - chr2L 691474 intron ds - chr2L 696027 intron ds - chr2L_8_690001 chr2L_690001 RAL-306_125b 19 chr2L 721184 721189 chr2L 721446 721452 6 263 14.0 3.5 8.8 0.6 268 chr2L 721184 intergenic not near genes chr2L 721318 intergenic not near genes chr2L 721452 intergenic not near genes chr2L_6_720001 chr2L_720001 RAL-306_125b 20 chr2L 746554 746571 chr2L 746670 746697 8 120 10.5 8.5 9.5 0.8 143 chr2L 746554 intergenic not near genes chr2L 746626 intergenic not near genes chr2L 746697 intergenic not near genes chr2L_8_745001 chr2L_745001 RAL-306_125b 21 chr2L 763569 763629 chr2L 763694 763734 15 117 6.5 8.5 7.5 1.8 165 chr2L 763569 intergenic not near genes chr2L 763652 intergenic not near genes chr2L 763734 intergenic not near genes chr2L_15_760001 chr2L_760001 RAL-306_125b 22 chr2L 770434 770479 chr2L 772258 772310 Bari1 17 1829 10.0 6.0 8.0 1.9 1876 chr2L 770434 intergenic not near genes chr2L 771372 intergenic not near genes chr2L 772310 intergenic CR44614 + chr2L_17_770001 chr2L_770001 RAL-306_125b 23 chr2L 844902 844955 chr2L 845039 845092 10 133 5.5 9.0 7.2 1.2 190 chr2L 844902 intron drongo - chr2L 844997 intron drongo - chr2L 845092 intron drongo - chr2L_10_840001 chr2L_840001 RAL-306_125b 24 chr2L 877808 877811 chr2L 877939 877942 4 131 11.0 4.0 7.5 0.5 134 chr2L 877808 3` UTR,exon CG15824 -,ninaA + chr2L 877875 3` UTR,intron CG15824 -,ninaA + chr2L 877942 3` UTR,intron CG15824 -,ninaA + chr2L_4_875001 chr2L_875001 RAL-306_125b 25 chr2L 877820 877875 chr2L 877935 877992 8 120 7.0 3.0 5.0 1.3 172 chr2L 877820 3` UTR,exon CG15824 -,ninaA + chr2L 877906 3` UTR,intron CG15824 -,ninaA + chr2L 877992 3` UTR,exon CG15824 -,ninaA + chr2L_8_875001 chr2L_875001 RAL-306_125b 26 chr2L 890322 890335 chr2L 890453 890465 8 130 4.0 5.5 4.8 1.4 143 chr2L 890322 intergenic not near genes chr2L 890394 intergenic not near genes chr2L 890465 intergenic not near genes chr2L_8_890001 chr2L_890001 RAL-306_125b 27 chr2L 927845 927880 chr2L 928022 928062 17 192 5.0 8.0 6.5 2.3 217 chr2L 927845 intron CG4341 + chr2L 927954 intron CG4341 + chr2L 928062 intron CG4341 + chr2L_17_925001 chr2L_925001 RAL-306_125b 28 chr2L 937008 937058 chr2L 937134 937184 11 126 2.0 1.5 1.8 3.9 176 chr2L 937008 intron CG4341 + chr2L 937096 intron CG4341 + chr2L 937184 intron CG4341 + chr2L_11_935001 chr2L_935001 RAL-306_125b 29 chr2L 976832 976912 chr2L 984518 984598 roo 15 7686 9.5 1.5 5.5 2.3 7766 chr2L 976832 intergenic not near genes chr2L 980715 intergenic not near genes chr2L 984598 intergenic not near genes chr2L_15_980001 chr2L_980001 RAL-306_125b 30 chr2L 996683 996745 chr2L 1005828 1005890 roo 14 9145 6.0 4.5 5.2 2.3 9207 chr2L 996683 intergenic not near genes chr2L 1001286 intergenic not near genes chr2L 1005890 intergenic not near genes chr2L_14_1000001 chr2L_1000001 RAL-306_125b 31 chr2L 1025070 1025114 chr2L 1025200 1025204 12 120 10.0 4.0 7.0 1.5 134 chr2L 1025070 intron IA-2 - chr2L 1025137 intron IA-2 - chr2L 1025204 intron IA-2 - chr2L_12_1025001 chr2L_1025001 RAL-306_125b 32 chr2L 1041333 1041372 chr2L 1041441 1041510 15 132 1.5 4.0 2.8 3.9 177 chr2L 1041333 intron IA-2 - chr2L 1041422 intron IA-2 - chr2L 1041510 intron IA-2 - chr2L_15_1040001 chr2L_1040001 RAL-306_125b 33 chr2L 1057447 1057484 chr2L 1057579 1057587 5 127 0.0 2.5 1.2 2.3 140 chr2L 1057447 intron S - chr2L 1057517 intron S - chr2L 1057587 intron S - chr2L_5_1055001 chr2L_1055001 RAL-306_125b 34 chr2L 1156816 1156894 chr2L 1156971 1157033 19 152 4.0 4.0 4.0 3.8 217 chr2L 1156816 intron capt - chr2L 1156924 intron capt - chr2L 1157033 intron capt - chr2L_19_1155001 chr2L_1155001 RAL-306_125b 35 chr2L 1220087 1220107 chr2L 1227603 1227623 blood 17 7516 16.5 10.5 13.5 1.2 7536 chr2L 1220087 intron CG42329 + chr2L 1223855 intron CG42329 + chr2L 1227623 intron CG42329 + chr2L_17_1220001 chr2L_1220001 RAL-306_125b 36 chr2L 1220108 1220147 chr2L 1227596 1227663 blood 14 7512 9.0 8.0 8.5 1.5 7555 chr2L 1220108 intron CG42329 + chr2L 1223886 intron CG42329 + chr2L 1227663 intron CG42329 + chr2L_14_1220001 chr2L_1220001 RAL-306_125b 37 chr2L 1261218 1261252 chr2L 1261339 1261382 7 129 1.5 7.0 4.2 1.3 164 chr2L 1261218 intron robo3 + chr2L 1261300 intron robo3 + chr2L 1261382 intron robo3 + chr2L_7_1260001 chr2L_1260001 RAL-306_125b 38 chr2L 1267362 1267427 chr2L 1267488 1267542 8 122 13.0 9.0 11.0 0.7 180 chr2L 1267362 intron robo3 + chr2L 1267452 intron robo3 + chr2L 1267542 intron robo3 + chr2L_8_1265001 chr2L_1265001 RAL-306_125b 39 chr2L 1444221 1444243 chr2L 1444400 1444422 4 178 5.5 7.5 6.5 0.5 201 chr2L 1444221 intergenic CG43402 + chr2L 1444322 intergenic CG43402 + chr2L 1444422 intergenic not near genes chr2L_4_1440001 chr2L_1440001 RAL-306_125b 40 chr2L 1458201 1458257 chr2L 1458328 1458377 13 124 8.0 9.0 8.5 1.4 176 chr2L 1458201 intergenic not near genes chr2L 1458289 intergenic not near genes chr2L 1458377 intergenic not near genes chr2L_13_1455001 chr2L_1455001 RAL-306_125b 41 chr2L 1570646 1570708 chr2L 1573568 1573630 F-element 13 2921 8.0 7.5 7.8 1.5 2984 chr2L 1570646 intron haf + chr2L 1572138 intron haf + chr2L 1573630 intron haf + chr2L_13_1570001 chr2L_1570001 RAL-306_125b 42 chr2L 1590924 1590989 chr2L 1591034 1591083 15 118 8.0 11.0 9.5 1.4 159 chr2L 1590924 intron haf + chr2L 1591004 intron haf + chr2L 1591083 intron haf + chr2L_15_1590001 chr2L_1590001 RAL-306_125b 43 chr2L 1628799 1628839 chr2L 1628938 1628978 14 136 9.0 5.5 7.2 1.7 179 chr2L 1628799 intergenic not near genes chr2L 1628888 intergenic not near genes chr2L 1628978 intergenic not near genes chr2L_14_1625001 chr2L_1625001 RAL-306_125b 44 chr2L 1634720 1634755 chr2L 1634855 1634890 14 133 8.5 9.0 8.8 1.4 170 chr2L 1634720 intergenic not near genes chr2L 1634805 intergenic not near genes chr2L 1634890 intergenic not near genes chr2L_14_1630001 chr2L_1630001 RAL-306_125b 45 chr2L 1678933 1678998 chr2L 1686448 1686508 blood 28 7514 5.0 10.0 7.5 3.3 7575 chr2L 1678933 intron chinmo + chr2L 1682720 intron chinmo + chr2L 1686508 intron chinmo + chr2L_28_1680001 chr2L_1680001 RAL-306_125b 46 chr2L 1694361 1694429 chr2L 1694492 1694567 10 137 3.0 3.0 3.0 2.5 206 chr2L 1694361 exon chinmo + chr2L 1694464 intron chinmo + chr2L 1694567 exon chinmo + chr2L_10_1690001 chr2L_1690001 RAL-306_125b 47 chr2L 1711333 1711379 chr2L 1711689 1711753 mdg3 11 368 4.0 4.5 4.2 2.1 420 chr2L 1711333 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711543 3` UTR frtz - chr2L 1711753 exon frtz - chr2L_11_1710001 chr2L_1710001 RAL-306_125b 48 chr2L 1721817 1721835 chr2L 1721925 1721957 7 123 0.0 6.5 3.2 1.7 140 chr2L 1721817 intron Rim2 - chr2L 1721887 intron Rim2 - chr2L 1721957 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-306_125b 49 chr2L 1721837 1721855 chr2L 1721922 1721978 7 109 0.0 6.5 3.2 1.7 141 chr2L 1721837 intron Rim2 - chr2L 1721908 intron Rim2 - chr2L 1721978 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-306_125b 50 chr2L 1724767 1724825 chr2L 1724899 1724957 20 131 13.0 6.0 9.5 1.9 190 chr2L 1724767 3` UTR Eno - chr2L 1724862 3` UTR Eno - chr2L 1724957 3` UTR Eno - chr2L_20_1720001 chr2L_1720001 RAL-306_125b 51 chr2L 1744412 1744470 chr2L 1744546 1744605 8 135 0.0 6.5 3.2 1.9 193 chr2L 1744412 intron CG17646 + chr2L 1744508 intron CG17646 + chr2L 1744605 intron CG17646 + chr2L_8_1740001 chr2L_1740001 RAL-306_125b 52 chr2L 1883306 1883315 chr2L 1883432 1883441 8 126 4.0 0.0 2.0 2.7 135 chr2L 1883306 intron CG15358 - chr2L 1883374 intron CG15358 - chr2L 1883441 intron CG15358 - chr2L_8_1880001 chr2L_1880001 RAL-306_125b 53 chr2L 1883367 1883446 chr2L 1883999 1884076 12 629 0.0 4.0 2.0 4.0 709 chr2L 1883367 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884076 intergenic CG15358 - chr2L_12_1880001 chr2L_1880001 RAL-306_125b 54 chr2L 1921324 1921390 chr2L 1921641 1921707 15 317 8.5 6.5 7.5 1.8 383 chr2L 1921324 intron CG7337 + chr2L 1921516 intron CG7337 + chr2L 1921707 intron CG7337 + chr2L_15_1920001 chr2L_1920001 RAL-306_125b 55 chr2L 2001781 2001816 chr2L 2001901 2001933 15 126 8.5 16.5 12.5 1.1 152 chr2L 2001781 intron,5` UTR CG33543 -,CR43464 + chr2L 2001857 intron,5` UTR CG33543 -,CR43464 + chr2L 2001933 intron,5` UTR CG33543 -,CR43464 + chr2L_15_2000001 chr2L_2000001 RAL-306_125b 56 chr2L 2024477 2024543 chr2L 2024615 2024681 18 138 10.5 9.5 10.0 1.6 204 chr2L 2024477 intron CG4238 + chr2L 2024579 intron CG4238 + chr2L 2024681 intron CG4238 + chr2L_18_2020001 chr2L_2020001 RAL-306_125b 57 chr2L 2049173 2049236 chr2L 2049302 2049320 15 125 0.5 6.0 3.2 3.6 147 chr2L 2049173 intergenic not near genes chr2L 2049246 intergenic not near genes chr2L 2049320 intergenic not near genes chr2L_15_2045001 chr2L_2045001 RAL-306_125b 58 chr2L 2073303 2073327 chr2L 2073436 2073450 5 130 13.5 7.5 10.5 0.4 147 chr2L 2073303 intron dpr3 - chr2L 2073376 intron dpr3 - chr2L 2073450 intron dpr3 - chr2L_5_2070001 chr2L_2070001 RAL-306_125b 59 chr2L 2073333 2073350 chr2L 2073431 2073453 7 109 8.5 8.5 8.5 0.7 120 chr2L 2073333 intron dpr3 - chr2L 2073393 intron dpr3 - chr2L 2073453 intron dpr3 - chr2L_7_2070001 chr2L_2070001 RAL-306_125b 60 chr2L 2081426 2081439 chr2L 2081715 2081716 5 287 7.5 5.5 6.5 0.7 290 chr2L 2081426 intron dpr3 - chr2L 2081571 intron dpr3 - chr2L 2081716 intron dpr3 - chr2L_5_2080001 chr2L_2080001 RAL-306_125b 61 chr2L 2081444 2081452 chr2L 2081711 2081741 6 284 6.5 5.0 5.8 0.9 297 chr2L 2081444 intron dpr3 - chr2L 2081592 intron dpr3 - chr2L 2081741 intron dpr3 - chr2L_6_2080001 chr2L_2080001 RAL-306_125b 62 chr2L 2085657 2085729 chr2L 2086046 2086117 21 387 0.5 6.5 3.5 4.7 460 chr2L 2085657 intron dpr3 - chr2L 2085887 intron dpr3 - chr2L 2086117 intron dpr3 - chr2L_21_2085001 chr2L_2085001 RAL-306_125b 63 chr2L 2100381 2100400 chr2L 2109573 2109601 roo 6 9198 12.0 10.0 11.0 0.5 9220 chr2L 2100381 intron dpr3 - chr2L 2104991 intron dpr3 - chr2L 2109601 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-306_125b 64 chr2L 2112091 2112130 chr2L 2119803 2119842 opus 5 7708 2.5 7.5 5.0 0.8 7751 chr2L 2112091 intergenic not near genes chr2L 2115966 intergenic not near genes chr2L 2119842 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-306_125b 65 chr2L 2126863 2126932 chr2L 2126993 2127048 17 121 8.0 8.0 8.0 1.9 185 chr2L 2126863 intergenic CG4259 - chr2L 2126956 intergenic CG4259 - chr2L 2127048 intergenic CG4259 - chr2L_17_2125001 chr2L_2125001 RAL-306_125b 66 chr2L 2260759 2260786 chr2L 2260895 2260922 9 135 9.5 6.5 8.0 1.0 163 chr2L 2260759 intergenic not near genes chr2L 2260840 intergenic not near genes chr2L 2260922 intergenic not near genes chr2L_9_2260001 chr2L_2260001 RAL-306_125b 67 chr2L 2260787 2260821 chr2L 2260891 2260957 8 122 5.0 6.0 5.5 1.2 170 chr2L 2260787 intergenic not near genes chr2L 2260872 intergenic not near genes chr2L 2260957 intergenic not near genes chr2L_8_2260001 chr2L_2260001 RAL-306_125b 68 chr2L 2294027 2294070 chr2L 2299262 2299310 copia 15 5245 3.0 7.0 5.0 2.5 5283 chr2L 2294027 intergenic not near genes chr2L 2296668 intergenic not near genes chr2L 2299310 intergenic not near genes chr2L_15_2295001 chr2L_2295001 RAL-306_125b 69 chr2L 2317074 2317130 chr2L 2317295 2317351 14 221 33.0 40.0 36.5 0.4 277 chr2L 2317074 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317351 intron,intron CG9967 -,eys + chr2L_14_2315001 chr2L_2315001 RAL-306_125b 70 chr2L 2357144 2357162 chr2L 2357312 2357330 7 167 17.5 10.5 14.0 0.5 186 chr2L 2357144 5` UTR,intron CG9967 -,eys + chr2L 2357237 5` UTR,intron CG9967 -,eys + chr2L 2357330 5` UTR,intron CG9967 -,eys + chr2L_7_2355001 chr2L_2355001 RAL-306_125b 71 chr2L 2357165 2357212 chr2L 2357306 2357364 17 160 8.5 10.0 9.2 1.7 199 chr2L 2357165 5` UTR,intron CG9967 -,eys + chr2L 2357264 5` UTR,intron CG9967 -,eys + chr2L 2357364 intron eys + chr2L_17_2355001 chr2L_2355001 RAL-306_125b 72 chr2L 2396266 2396336 chr2L 2396437 2396507 21 171 8.0 6.5 7.2 2.6 241 chr2L 2396266 intron VGlut + chr2L 2396386 intron VGlut + chr2L 2396507 intron VGlut + chr2L_21_2395001 chr2L_2395001 RAL-306_125b 73 chr2L 2497596 2497614 chr2L 2497722 2497740 11 126 6.5 10.0 8.2 1.2 144 chr2L 2497596 3` UTR oaf + chr2L 2497668 3` UTR oaf + chr2L 2497740 3` UTR oaf + chr2L_11_2495001 chr2L_2495001 RAL-306_125b 74 chr2L 2503668 2503680 chr2L 2504497 2504509 4 828 10.5 3.5 7.0 0.5 841 chr2L 2503668 intergenic not near genes chr2L 2504088 intergenic not near genes chr2L 2504509 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RAL-306_125b 75 chr2L 2503682 2503739 chr2L 2504495 2504498 25 821 5.5 3.0 4.2 4.8 816 chr2L 2503682 intergenic not near genes chr2L 2504090 intergenic not near genes chr2L 2504498 intergenic not near genes chr2L_25_2500001 chr2L_2500001 RAL-306_125b 76 chr2L 2565498 2565546 chr2L 2571616 2571664 297 12 6114 8.5 5.5 7.0 1.5 6166 chr2L 2565498 exon Cyp309a2 - chr2L 2568581 intron Cyp309a2 - chr2L 2571664 exon Cyp309a2 - chr2L_12_2565001 chr2L_2565001 RAL-306_125b 77 chr2L 2653056 2653125 chr2L 2654651 2654709 14 1580 48.0 54.0 51.0 0.3 1653 chr2L 2653056 5` UTR Prosbeta4R1 + chr2L 2653882 3` UTR Prosbeta4R1 + chr2L 2654709 exon Or23a + chr2L_14_2650001 chr2L_2650001 RAL-306_125b 78 chr2L 2661158 2661185 chr2L 2663046 2663055 I-element 4 1879 12.0 3.5 7.8 0.5 1897 chr2L 2661158 intergenic not near genes chr2L 2662106 intergenic not near genes chr2L 2663055 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-306_125b 79 chr2L 2661190 2661226 chr2L 2663038 2663048 I-element 14 1856 6.5 3.0 4.8 2.4 1858 chr2L 2661190 intergenic not near genes chr2L 2662119 intergenic not near genes chr2L 2663048 intergenic not near genes chr2L_14_2660001 chr2L_2660001 RAL-306_125b 80 chr2L 2667585 2667649 chr2L 2667714 2667778 15 126 6.0 4.5 5.2 2.4 193 chr2L 2667585 intergenic not near genes chr2L 2667682 intergenic not near genes chr2L 2667778 intergenic not near genes chr2L_15_2665001 chr2L_2665001 RAL-306_125b 81 chr2L 2692304 2692334 chr2L 2692413 2692435 10 119 10.0 5.0 7.5 1.2 131 chr2L 2692304 intron CG31690 + chr2L 2692370 intron CG31690 + chr2L 2692435 intron CG31690 + chr2L_10_2690001 chr2L_2690001 RAL-306_125b 82 chr2L 2698804 2698890 chr2L 2698952 2699027 14 135 0.0 1.0 0.5 9.3 223 chr2L 2698804 intron CG31690 + chr2L 2698916 intron CG31690 + chr2L 2699027 intron CG31690 + chr2L_14_2695001 chr2L_2695001 RAL-306_125b 83 chr2L 2713473 2713540 chr2L 2713622 2713689 18 146 8.5 6.0 7.2 2.2 216 chr2L 2713473 intron CG31690 + chr2L 2713581 intron CG31690 + chr2L 2713689 intron CG31690 + chr2L_18_2710001 chr2L_2710001 RAL-306_125b 84 chr2L 2772576 2772619 chr2L 2779208 2779216 297 17 6628 6.5 15.0 10.8 1.4 6640 chr2L 2772576 3` UTR Syt1 - chr2L 2775896 intron Syt1 - chr2L 2779216 3` UTR Syt1 - chr2L_17_2775001 chr2L_2775001 RAL-306_125b 85 chr2L 2782862 2782933 chr2L 2782990 2783060 10 127 10.5 0.0 5.2 1.6 198 chr2L 2782862 intron Syt1 - chr2L 2782961 intron Syt1 - chr2L 2783060 3` UTR Syt1 - chr2L_10_2780001 chr2L_2780001 RAL-306_125b 86 chr2L 2800563 2800615 chr2L 2800696 2800753 14 134 4.5 0.0 2.2 4.4 190 chr2L 2800563 intergenic not near genes chr2L 2800658 intergenic not near genes chr2L 2800753 intergenic not near genes chr2L_14_2800001 chr2L_2800001 RAL-306_125b 87 chr2L 2826490 2826508 chr2L 2826632 2826650 5 142 15.5 5.5 10.5 0.4 160 chr2L 2826490 intron Duox - chr2L 2826570 intron Duox - chr2L 2826650 intron Duox - chr2L_5_2825001 chr2L_2825001 RAL-306_125b 88 chr2L 2826511 2826575 chr2L 2826631 2826710 24 138 2.5 5.5 4.0 4.8 199 chr2L 2826511 intron Duox - chr2L 2826610 intron Duox - chr2L 2826710 intron Duox - chr2L_24_2825001 chr2L_2825001 RAL-306_125b 89 chr2L 2830377 2830418 chr2L 2830557 2830598 7 180 7.5 5.5 6.5 0.9 221 chr2L 2830377 intergenic Duox - chr2L 2830488 intergenic Duox - chr2L 2830598 intergenic Duox - chr2L_7_2830001 chr2L_2830001 RAL-306_125b 90 chr2L 2885324 2885395 chr2L 2885450 2885521 30 126 4.5 5.0 4.8 5.2 197 chr2L 2885324 intron NTPase - chr2L 2885422 intron NTPase - chr2L 2885521 intron NTPase - chr2L_30_2885001 chr2L_2885001 RAL-306_125b 91 chr2L 2909859 2909922 chr2L 2909993 2910055 14 130 4.5 14.5 9.5 1.3 196 chr2L 2909859 intron lilli + chr2L 2909957 intron lilli + chr2L 2910055 intron lilli + chr2L_14_2905001 chr2L_2905001 RAL-306_125b 92 chr2L 2937372 2937450 chr2L 2937499 2937577 29 125 10.0 7.5 8.8 3.0 205 chr2L 2937372 intron lilli + chr2L 2937474 intron lilli + chr2L 2937577 intron lilli + chr2L_29_2935001 chr2L_2935001 RAL-306_125b 93 chr2L 3072990 3073053 chr2L 3078243 3078306 copia 16 5251 6.0 5.0 5.5 2.5 5316 chr2L 3072990 intron toc - chr2L 3075648 intron toc - chr2L 3078306 intron toc - chr2L_16_3075001 chr2L_3075001 RAL-306_125b 94 chr2L 3108834 3108894 chr2L 3108955 3108994 18 123 6.0 4.0 5.0 3.0 160 chr2L 3108834 exon toc - chr2L 3108914 intron toc - chr2L 3108994 intron toc - chr2L_18_3105001 chr2L_3105001 RAL-306_125b 95 chr2L 3134247 3134289 chr2L 3134373 3134415 13 126 9.0 16.0 12.5 1.0 168 chr2L 3134247 intron toc - chr2L 3134331 intron toc - chr2L 3134415 intron toc - chr2L_13_3130001 chr2L_3130001 RAL-306_125b 96 chr2L 3134904 3134950 chr2L 3135031 3135077 13 127 9.5 3.5 6.5 1.7 173 chr2L 3134904 intron toc - chr2L 3134990 intron toc - chr2L 3135077 intron toc - chr2L_13_3130001 chr2L_3130001 RAL-306_125b 97 chr2L 3191400 3191461 chr2L 3191546 3191587 13 144 1.5 6.5 4.0 2.6 187 chr2L 3191400 intron CG34393 - chr2L 3191494 intron CG34393 - chr2L 3191587 intron CG34393 - chr2L_13_3190001 chr2L_3190001 RAL-306_125b 98 chr2L 3193789 3193852 chr2L 3193925 3193988 22 135 9.0 8.0 8.5 2.3 199 chr2L 3193789 intron CG34393 - chr2L 3193888 intron CG34393 - chr2L 3193988 intron CG34393 - chr2L_22_3190001 chr2L_3190001 RAL-306_125b 99 chr2L 3202706 3202763 chr2L 3210184 3210238 mdg1 23 7478 5.5 6.0 5.8 3.4 7532 chr2L 3202706 intergenic not near genes chr2L 3206472 intergenic not near genes chr2L 3210238 intergenic CR45336 + chr2L_23_3205001 chr2L_3205001 RAL-306_125b 100 chr2L 3215179 3215230 chr2L 3215308 3215359 13 129 8.0 5.0 6.5 1.7 180 chr2L 3215179 intergenic not near genes chr2L 3215269 intergenic not near genes chr2L 3215359 intergenic not near genes chr2L_13_3215001 chr2L_3215001 RAL-306_125b 101 chr2L 3251466 3251523 chr2L 3259081 3259103 springer 14 7612 2.0 8.0 5.0 2.3 7637 chr2L 3251466 intergenic not near genes chr2L 3255284 intergenic not near genes chr2L 3259103 intergenic not near genes chr2L_14_3255001 chr2L_3255001 RAL-306_125b 102 chr2L 3261463 3261509 chr2L 3261605 3261651 20 141 6.5 13.0 9.8 1.9 188 chr2L 3261463 intergenic CR45338 -,CR45337 - chr2L 3261557 intergenic CR45338 -,CR45337 - chr2L 3261651 3` UTR CR45338 - chr2L_20_3260001 chr2L_3260001 RAL-306_125b 103 chr2L 3272940 3272967 chr2L 3273074 3273101 6 133 0.0 9.5 4.8 1.0 161 chr2L 3272940 intergenic not near genes chr2L 3273020 intergenic not near genes chr2L 3273101 intergenic not near genes chr2L_6_3270001 chr2L_3270001 RAL-306_125b 104 chr2L 3291206 3291265 chr2L 3291336 3291389 22 126 8.0 9.0 8.5 2.3 183 chr2L 3291206 intergenic CG9664 - chr2L 3291298 3` UTR CG9664 - chr2L 3291389 3` UTR CG9664 - chr2L_22_3290001 chr2L_3290001 RAL-306_125b 105 chr2L 3366515 3366556 chr2L 3366648 3366681 7 130 11.0 2.0 6.5 0.9 166 chr2L 3366515 intron CG34394 - chr2L 3366598 intron CG34394 - chr2L 3366681 intron CG34394 - chr2L_7_3365001 chr2L_3365001 RAL-306_125b 106 chr2L 3388557 3388616 chr2L 3388848 3388907 pogo 30 289 8.0 5.0 6.5 4.0 350 chr2L 3388557 intergenic CG42460 - chr2L 3388732 intergenic CG42460 - chr2L 3388907 intergenic CG42460 -,CR44791 + chr2L_30_3385001 chr2L_3385001 RAL-306_125b 107 chr2L 3396549 3396620 chr2L 3396796 3396867 22 247 9.0 8.5 8.8 2.2 318 chr2L 3396549 intergenic not near genes chr2L 3396708 intergenic not near genes chr2L 3396867 intergenic CR44792 - chr2L_22_3395001 chr2L_3395001 RAL-306_125b 108 chr2L 3431327 3431353 chr2L 3431453 3431479 16 126 6.0 12.0 9.0 1.6 152 chr2L 3431327 intergenic not near genes chr2L 3431403 intergenic not near genes chr2L 3431479 intergenic not near genes chr2L_16_3430001 chr2L_3430001 RAL-306_125b 109 chr2L 3497807 3497867 chr2L 3497920 3497995 19 126 6.0 5.5 5.8 2.8 188 chr2L 3497807 intron tim - chr2L 3497901 intron tim - chr2L 3497995 intron tim - chr2L_19_3495001 chr2L_3495001 RAL-306_125b 110 chr2L 3508298 3508368 chr2L 3508426 3508496 26 126 6.0 7.0 6.5 3.5 198 chr2L 3508298 intergenic tim -,CR45299 + chr2L 3508397 intergenic CR45299 +,tim - chr2L 3508496 intergenic CR45299 +,tim - chr2L_26_3505001 chr2L_3505001 RAL-306_125b 111 chr2L 3540399 3540458 chr2L 3540535 3540594 17 135 4.5 10.0 7.2 2.1 195 chr2L 3540399 intron drm + chr2L 3540496 intron drm + chr2L 3540594 intron drm + chr2L_17_3540001 chr2L_3540001 RAL-306_125b 112 chr2L 3556973 3557035 chr2L 3557100 3557147 11 126 12.0 8.5 10.2 1.0 174 chr2L 3556973 intergenic not near genes chr2L 3557060 intergenic not near genes chr2L 3557147 intergenic not near genes chr2L_11_3555001 chr2L_3555001 RAL-306_125b 113 chr2L 3591829 3591843 chr2L 3591925 3591968 4 111 20.0 15.0 17.5 0.2 139 chr2L 3591829 intergenic not near genes chr2L 3591898 intergenic not near genes chr2L 3591968 intergenic not near genes chr2L_4_3590001 chr2L_3590001 RAL-306_125b 114 chr2L 3649732 3649805 chr2L 3654989 3655057 copia 19 5253 2.0 11.0 6.5 2.5 5325 chr2L 3649732 intron for - chr2L 3652394 intron for - chr2L 3655057 intron for - chr2L_19_3650001 chr2L_3650001 RAL-306_125b 115 chr2L 3667924 3668061 chr2L 3668051 3668187 10 127 0.5 0.0 0.2 8.3 263 chr2L 3667924 intron CG34340 + chr2L 3668056 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668187 intron,exon CG34340 +,Sfp24Ba - chr2L_10_3665001 chr2L_3665001 RAL-306_125b 116 chr2L 3685978 3686045 chr2L 3686116 3686183 18 138 1.0 5.5 3.2 4.3 205 chr2L 3685978 intron CG34340 + chr2L 3686080 intron CG34340 + chr2L 3686183 intron CG34340 + chr2L_18_3685001 chr2L_3685001 RAL-306_125b 117 chr2L 3702858 3702930 chr2L 3702994 3703065 18 133 6.0 11.0 8.5 1.9 207 chr2L 3702858 5` UTR CR44311 + chr2L 3702962 intergenic CR44311 + chr2L 3703065 intergenic CR44311 + chr2L_18_3700001 chr2L_3700001 RAL-306_125b 118 chr2L 3753924 3753942 chr2L 3754051 3754069 10 126 20.0 12.0 16.0 0.6 145 chr2L 3753924 intergenic not near genes chr2L 3753996 intergenic not near genes chr2L 3754069 intergenic not near genes chr2L_10_3750001 chr2L_3750001 RAL-306_125b 119 chr2L 3753943 3753993 chr2L 3754050 3754103 17 124 8.5 11.5 10.0 1.5 160 chr2L 3753943 intergenic not near genes chr2L 3754023 intergenic not near genes chr2L 3754103 intergenic not near genes chr2L_17_3750001 chr2L_3750001 RAL-306_125b 120 chr2L 3768560 3768590 chr2L 3768692 3768722 16 132 2.5 12.0 7.2 2.0 162 chr2L 3768560 3` UTR CG43707 + chr2L 3768641 3` UTR CG43707 + chr2L 3768722 3` UTR CG43707 + chr2L_16_3765001 chr2L_3765001 RAL-306_125b 121 chr2L 3792436 3792492 chr2L 3792578 3792634 12 139 6.5 6.0 6.2 1.7 198 chr2L 3792436 intron CG3921 + chr2L 3792535 intron CG3921 + chr2L 3792634 exon CG3921 + chr2L_12_3790001 chr2L_3790001 RAL-306_125b 122 chr2L 3821029 3821081 chr2L 3821155 3821207 7 126 12.0 0.0 6.0 1.0 178 chr2L 3821029 intergenic not near genes chr2L 3821118 intergenic not near genes chr2L 3821207 intergenic not near genes chr2L_7_3820001 chr2L_3820001 RAL-306_125b 123 chr2L 3831798 3831864 chr2L 3831929 3831963 24 129 6.0 8.0 7.0 3.0 165 chr2L 3831798 intergenic not near genes chr2L 3831880 intergenic not near genes chr2L 3831963 intergenic not near genes chr2L_24_3830001 chr2L_3830001 RAL-306_125b 124 chr2L 3846462 3846499 chr2L 3846548 3846583 9 103 10.5 6.5 8.5 0.9 121 chr2L 3846462 intergenic not near genes chr2L 3846522 intergenic not near genes chr2L 3846583 intergenic not near genes chr2L_9_3845001 chr2L_3845001 RAL-306_125b 125 chr2L 3891849 3891915 chr2L 3891984 3892050 23 134 10.0 8.5 9.2 2.3 201 chr2L 3891849 intron capu - chr2L 3891950 intron capu - chr2L 3892050 intron capu - chr2L_23_3890001 chr2L_3890001 RAL-306_125b 126 chr2L 3936574 3936651 chr2L 3936702 3936781 14 130 0.0 4.5 2.2 4.4 207 chr2L 3936574 intron fred - chr2L 3936678 intron fred - chr2L 3936781 intron fred - chr2L_14_3935001 chr2L_3935001 RAL-306_125b 127 chr2L 3938326 3938356 chr2L 3938464 3938479 12 135 8.0 0.0 4.0 2.4 153 chr2L 3938326 intron fred - chr2L 3938402 intron fred - chr2L 3938479 intron fred - chr2L_12_3935001 chr2L_3935001 RAL-306_125b 128 chr2L 3959128 3959200 chr2L 3959255 3959326 22 125 10.5 8.5 9.5 2.1 198 chr2L 3959128 intron fred - chr2L 3959227 intron fred - chr2L 3959326 intron fred - chr2L_22_3955001 chr2L_3955001 RAL-306_125b 129 chr2L 3960528 3960566 chr2L 3960748 3960781 13 220 12.0 6.5 9.2 1.3 253 chr2L 3960528 intron fred - chr2L 3960654 intron fred - chr2L 3960781 intron fred - chr2L_13_3960001 chr2L_3960001 RAL-306_125b 130 chr2L 3960567 3960593 chr2L 3960747 3960813 14 216 6.0 6.5 6.2 1.9 246 chr2L 3960567 intron fred - chr2L 3960690 intron fred - chr2L 3960813 intron fred - chr2L_14_3960001 chr2L_3960001 RAL-306_125b 131 chr2L 3963519 3963565 chr2L 3963645 3963691 13 121 7.5 11.0 9.2 1.3 172 chr2L 3963519 intron fred - chr2L 3963605 intron fred - chr2L 3963691 intron fred - chr2L_13_3960001 chr2L_3960001 RAL-306_125b 132 chr2L 3982598 3982628 chr2L 3982736 3982766 7 138 1.5 11.5 6.5 0.9 168 chr2L 3982598 intron fred - chr2L 3982682 intron fred - chr2L 3982766 intron fred - chr2L_7_3980001 chr2L_3980001 RAL-306_125b 133 chr2L 4037752 4037808 chr2L 4037889 4037945 16 137 6.5 5.5 6.0 2.3 193 chr2L 4037752 intron ed + chr2L 4037848 intron ed + chr2L 4037945 intron ed + chr2L_16_4035001 chr2L_4035001 RAL-306_125b 134 chr2L 4038453 4038525 chr2L 4039361 4039433 24 904 6.0 5.5 5.8 3.5 980 chr2L 4038453 intron ed + chr2L 4038943 intron ed + chr2L 4039433 intron ed + chr2L_24_4035001 chr2L_4035001 RAL-306_125b 135 chr2L 4060121 4060199 chr2L 4060242 4060314 8 122 6.0 7.0 6.5 1.1 193 chr2L 4060121 intron ed + chr2L 4060218 intron ed + chr2L 4060314 intron ed + chr2L_8_4060001 chr2L_4060001 RAL-306_125b 136 chr2L 4066001 4066054 chr2L 4068876 4068922 Juan 19 2872 8.0 9.0 8.5 2.0 2921 chr2L 4066001 intron ed + chr2L 4067462 intron ed + chr2L 4068922 intron ed + chr2L_19_4065001 chr2L_4065001 RAL-306_125b 137 chr2L 4109924 4109935 chr2L 4110052 4110053 7 131 5.5 10.5 8.0 0.8 129 chr2L 4109924 intron ed + chr2L 4109988 intron ed + chr2L 4110053 intron ed + chr2L_7_4105001 chr2L_4105001 RAL-306_125b 138 chr2L 4166336 4166373 chr2L 4166469 4166506 11 128 14.5 8.5 11.5 0.9 170 chr2L 4166336 intergenic Or24a - chr2L 4166421 intergenic Or24a - chr2L 4166506 intergenic Or24a - chr2L_11_4165001 chr2L_4165001 RAL-306_125b 139 chr2L 4166375 4166406 chr2L 4166458 4166508 6 109 8.5 7.0 7.8 0.7 133 chr2L 4166375 intergenic Or24a - chr2L 4166442 intergenic Or24a - chr2L 4166508 intergenic Or24a - chr2L_6_4165001 chr2L_4165001 RAL-306_125b 140 chr2L 4195086 4195112 chr2L 4195222 4195248 13 136 8.0 13.0 10.5 1.1 162 chr2L 4195086 exon CG3714 - chr2L 4195167 intron CG3714 - chr2L 4195248 intron CG3714 - chr2L_13_4195001 chr2L_4195001 RAL-306_125b 141 chr2L 4289774 4289849 chr2L 4290124 4290191 21 343 4.0 4.5 4.2 4.0 417 chr2L 4289774 intron tutl + chr2L 4289982 intron tutl + chr2L 4290191 intron tutl + chr2L_21_4285001 chr2L_4285001 RAL-306_125b 142 chr2L 4293944 4294013 chr2L 4294086 4294152 21 141 6.5 7.0 6.8 2.7 208 chr2L 4293944 intron tutl + chr2L 4294048 intron tutl + chr2L 4294152 intron tutl + chr2L_21_4290001 chr2L_4290001 RAL-306_125b 143 chr2L 4346438 4346450 chr2L 4346570 4346581 6 132 1.5 4.0 2.8 1.6 143 chr2L 4346438 intergenic not near genes chr2L 4346510 intergenic not near genes chr2L 4346581 intergenic not near genes chr2L_6_4345001 chr2L_4345001 RAL-306_125b 144 chr2L 4438596 4438619 chr2L 4439049 4439103 7 478 1.0 8.5 4.8 1.2 507 chr2L 4438596 intron CG15431 - chr2L 4438850 intron CG15431 - chr2L 4439103 5` UTR CG15431 - chr2L_7_4435001 chr2L_4435001 RAL-306_125b 145 chr2L 4601662 4601729 chr2L 4609153 4609220 mdg1 20 7489 6.0 9.0 7.5 2.4 7558 chr2L 4601662 intron dp - chr2L 4605441 intron dp - chr2L 4609220 intron dp - chr2L_20_4605001 chr2L_4605001 RAL-306_125b 146 chr2L 4656506 4656569 chr2L 4656620 4656696 17 126 7.0 1.0 4.0 3.4 190 chr2L 4656506 intergenic not near genes chr2L 4656601 intergenic not near genes chr2L 4656696 intergenic not near genes chr2L_17_4655001 chr2L_4655001 RAL-306_125b 147 chr2L 4661427 4661501 chr2L 4661558 4661611 20 128 7.0 6.5 6.8 2.6 184 chr2L 4661427 intergenic not near genes chr2L 4661519 intergenic not near genes chr2L 4661611 intergenic not near genes chr2L_20_4660001 chr2L_4660001 RAL-306_125b 148 chr2L 4661795 4661853 chr2L 4669425 4669483 opus 14 7630 5.0 12.0 8.5 1.5 7688 chr2L 4661795 intergenic not near genes chr2L 4665639 intergenic not near genes chr2L 4669483 intergenic not near genes chr2L_14_4665001 chr2L_4665001 RAL-306_125b 149 chr2L 4793283 4793318 chr2L 4793628 4793663 16 342 7.5 8.5 8.0 1.8 380 chr2L 4793283 intron CG15630 - chr2L 4793473 intron CG15630 - chr2L 4793663 exon CG15630 - chr2L_16_4790001 chr2L_4790001 RAL-306_125b 150 chr2L 4803849 4803913 chr2L 4803983 4804044 22 131 8.0 10.5 9.2 2.2 195 chr2L 4803849 intergenic not near genes chr2L 4803946 intergenic not near genes chr2L 4804044 intergenic not near genes chr2L_22_4800001 chr2L_4800001 RAL-306_125b 151 chr2L 4819443 4819516 chr2L 4819615 4819687 17 170 2.5 5.0 3.8 3.5 244 chr2L 4819443 intergenic not near genes chr2L 4819565 intergenic not near genes chr2L 4819687 intergenic not near genes chr2L_17_4815001 chr2L_4815001 RAL-306_125b 152 chr2L 4841024 4841083 chr2L 4841150 4841208 14 124 10.0 10.5 10.2 1.2 184 chr2L 4841024 intron CG12194 + chr2L 4841116 intron CG12194 + chr2L 4841208 3` UTR CG12194 + chr2L_14_4840001 chr2L_4840001 RAL-306_125b 153 chr2L 4841085 4841096 chr2L 4841145 4841222 6 115 8.5 9.5 9.0 0.6 137 chr2L 4841085 intron CG12194 + chr2L 4841154 exon CG12194 + chr2L 4841222 3` UTR CG12194 + chr2L_6_4840001 chr2L_4840001 RAL-306_125b 154 chr2L 4918134 4918150 chr2L 4923257 4923273 jockey 11 5122 19.0 12.5 15.8 0.7 5139 chr2L 4918134 intron hoe1 - chr2L 4920704 intron hoe1 - chr2L 4923273 intron hoe1 - chr2L_11_4920001 chr2L_4920001 RAL-306_125b 155 chr2L 4918155 4918185 chr2L 4923252 4923278 jockey 10 5117 11.5 12.0 11.8 0.8 5123 chr2L 4918155 intron hoe1 - chr2L 4920716 intron hoe1 - chr2L 4923278 intron hoe1 - chr2L_10_4920001 chr2L_4920001 RAL-306_125b 156 chr2L 5027915 5027986 chr2L 5028049 5028120 17 131 0.5 10.0 5.2 2.7 205 chr2L 5027915 intron vkg - chr2L 5028018 intron vkg - chr2L 5028120 5` UTR vkg - chr2L_17_5025001 chr2L_5025001 RAL-306_125b 157 chr2L 5092364 5092439 chr2L 5092499 5092576 22 135 0.0 6.0 3.0 5.5 212 chr2L 5092364 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092576 intron pgant5 - chr2L_22_5090001 chr2L_5090001 RAL-306_125b 158 chr2L 5207250 5207310 chr2L 5209315 5209365 20 2058 113.5 102.5 108.0 0.2 2115 chr2L 5207250 intergenic Cyp28d2 +,Msp300 + chr2L 5208308 exon Cyp28d2 + chr2L 5209365 intergenic Cyp28d2 + chr2L_20_5205001 chr2L_5205001 RAL-306_125b 159 chr2L 5206807 5206881 chr2L 5209702 5209776 89 2896 75.5 94.0 84.8 1.0 2969 chr2L 5206807 3` UTR Msp300 + chr2L 5208292 exon Cyp28d2 + chr2L 5209776 intergenic Cyp28d2 + chr2L_89_5205001 chr2L_5205001 RAL-306_125b 160 chr2L 5276684 5276732 chr2L 5276803 5276866 13 130 4.5 5.0 4.8 2.2 182 chr2L 5276684 exon Bsg25D - chr2L 5276775 intron Bsg25D - chr2L 5276866 intron Bsg25D - chr2L_13_5275001 chr2L_5275001 RAL-306_125b 161 chr2L 5284338 5284356 chr2L 5284474 5284492 8 136 14.5 13.5 14.0 0.5 154 chr2L 5284338 intergenic not near genes chr2L 5284415 intergenic not near genes chr2L 5284492 intergenic not near genes chr2L_8_5280001 chr2L_5280001 RAL-306_125b 162 chr2L 5284363 5284404 chr2L 5284473 5284540 19 135 6.5 13.5 10.0 1.7 177 chr2L 5284363 intergenic not near genes chr2L 5284452 intergenic not near genes chr2L 5284540 intergenic not near genes chr2L_19_5280001 chr2L_5280001 RAL-306_125b 163 chr2L 5342726 5342788 chr2L 5345156 5345218 Doc 24 2429 9.5 8.0 8.8 2.4 2492 chr2L 5342726 intergenic CG12512 - chr2L 5343972 intergenic not near genes chr2L 5345218 intergenic not near genes chr2L_24_5340001 chr2L_5340001 RAL-306_125b 164 chr2L 5380192 5380212 chr2L 5380337 5380357 6 145 16.0 14.5 15.2 0.4 165 chr2L 5380192 3` UTR CR42850 - chr2L 5380274 3` UTR CR42850 - chr2L 5380357 intron CR42850 - chr2L_6_5380001 chr2L_5380001 RAL-306_125b 165 chr2L 5380214 5380220 chr2L 5380333 5380359 6 140 14.0 14.0 14.0 0.4 145 chr2L 5380214 3` UTR CR42850 - chr2L 5380286 3` UTR CR42850 - chr2L 5380359 intron CR42850 - chr2L_6_5380001 chr2L_5380001 RAL-306_125b 166 chr2L 5459914 5459929 chr2L 5460045 5460061 6 130 4.0 5.5 4.8 1.0 147 chr2L 5459914 intergenic not near genes chr2L 5459988 intergenic not near genes chr2L 5460061 intergenic not near genes chr2L_6_5455001 chr2L_5455001 RAL-306_125b 167 chr2L 5475105 5475158 chr2L 5475260 5475313 21 155 5.5 7.5 6.5 2.8 208 chr2L 5475105 intergenic not near genes chr2L 5475209 intergenic not near genes chr2L 5475313 intergenic not near genes chr2L_21_5475001 chr2L_5475001 RAL-306_125b 168 chr2L 5500010 5500074 chr2L 5500146 5500154 12 130 0.5 7.5 4.0 2.4 144 chr2L 5500010 intergenic not near genes chr2L 5500082 intergenic not near genes chr2L 5500154 intergenic not near genes chr2L_12_5500001 chr2L_5500001 RAL-306_125b 169 chr2L 5511282 5511357 chr2L 5511415 5511490 23 131 7.5 6.0 6.8 2.9 208 chr2L 5511282 intergenic not near genes chr2L 5511386 intergenic not near genes chr2L 5511490 intergenic not near genes chr2L_23_5510001 chr2L_5510001 RAL-306_125b 170 chr2L 5647492 5647544 chr2L 5647648 5647700 12 151 5.0 11.5 8.2 1.3 208 chr2L 5647492 intron CG31646 - chr2L 5647596 intron CG31646 - chr2L 5647700 intron CG31646 - chr2L_12_5645001 chr2L_5645001 RAL-306_125b 171 chr2L 5666243 5666322 chr2L 5666381 5666462 5 139 2.5 5.5 4.0 1.0 219 chr2L 5666243 intron Hsp60C + chr2L 5666352 intron Hsp60C + chr2L 5666462 intron Hsp60C + chr2L_5_5665001 chr2L_5665001 RAL-306_125b 172 chr2L 5676930 5677013 chr2L 5677063 5677117 31 127 3.0 6.0 4.5 5.6 187 chr2L 5676930 intergenic not near genes chr2L 5677024 intergenic not near genes chr2L 5677117 intergenic not near genes chr2L_31_5675001 chr2L_5675001 RAL-306_125b 173 chr2L 5695814 5695888 chr2L 5695956 5696030 41 141 4.5 8.0 6.2 5.7 216 chr2L 5695814 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696030 intergenic not near genes chr2L_41_5695001 chr2L_5695001 RAL-306_125b 174 chr2L 5805717 5805784 chr2L 5806221 5806288 27 502 4.5 5.0 4.8 4.7 571 chr2L 5805717 intron CG11034 + chr2L 5806002 intron CG11034 + chr2L 5806288 intron CG11034 + chr2L_27_5805001 chr2L_5805001 RAL-306_125b 175 chr2L 5815032 5815062 chr2L 5815159 5815184 16 125 11.0 0.0 5.5 2.5 152 chr2L 5815032 intergenic not near genes chr2L 5815108 intergenic not near genes chr2L 5815184 intergenic not near genes chr2L_16_5815001 chr2L_5815001 RAL-306_125b 176 chr2L 5826009 5826073 chr2L 5826141 5826205 29 132 6.5 5.5 6.0 4.1 196 chr2L 5826009 intron TrissinR + chr2L 5826107 intron TrissinR + chr2L 5826205 intron TrissinR + chr2L_29_5825001 chr2L_5825001 RAL-306_125b 177 chr2L 5827679 5827709 chr2L 5836737 5836767 roo 11 9057 11.5 5.5 8.5 1.2 9088 chr2L 5827679 intron TrissinR + chr2L 5832223 intron TrissinR + chr2L 5836767 intron TrissinR + chr2L_11_5830001 chr2L_5830001 RAL-306_125b 178 chr2L 5827725 5827741 chr2L 5836733 5836782 roo 4 9041 7.5 5.5 6.5 0.5 9057 chr2L 5827725 intron TrissinR + chr2L 5832254 intron TrissinR + chr2L 5836782 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-306_125b 179 chr2L 5878547 5878619 chr2L 5878681 5878747 26 129 10.0 11.5 10.8 2.2 200 chr2L 5878547 intron rau - chr2L 5878647 intron rau - chr2L 5878747 intron rau - chr2L_26_5875001 chr2L_5875001 RAL-306_125b 180 chr2L 5922762 5922913 chr2L 5922901 5923042 11 136 0.0 0.0 0.0 11.0 280 chr2L 5922762 3` UTR bchs + chr2L 5922902 3` UTR CG9016 - chr2L 5923042 3` UTR CG9016 - chr2L_11_5920001 chr2L_5920001 RAL-306_125b 181 chr2L 5926223 5926353 chr2L 5926353 5926558 9 196 0.0 0.0 0.0 9.0 335 chr2L 5926223 intron dsf + chr2L 5926390 intron dsf + chr2L 5926558 intron dsf + chr2L_9_5925001 chr2L_5925001 RAL-306_125b 182 chr2L 5931266 5931313 chr2L 5931428 5931475 16 162 10.0 3.0 6.5 2.1 209 chr2L 5931266 intron dsf + chr2L 5931370 intron dsf + chr2L 5931475 intron dsf + chr2L_16_5930001 chr2L_5930001 RAL-306_125b 183 chr2L 5946678 5946726 chr2L 5946811 5946824 13 128 28.0 40.5 34.2 0.4 146 chr2L 5946678 exon Gpdh + chr2L 5946751 intron Gpdh + chr2L 5946824 intron Gpdh + chr2L_13_5945001 chr2L_5945001 RAL-306_125b 184 chr2L 5944557 5944589 chr2L 5948949 5948991 8 4393 23.5 51.0 37.2 0.2 4434 chr2L 5944557 intron Gpdh + chr2L 5946774 intron Gpdh + chr2L 5948991 intergenic Gpdh +,CG9044 + chr2L_8_5945001 chr2L_5945001 RAL-306_125b 185 chr2L 6007045 6007073 chr2L 6007171 6007199 13 126 17.0 1.0 9.0 1.3 154 chr2L 6007045 intergenic Gal -,CG9098 - chr2L 6007122 intergenic CG9098 -,Gal - chr2L 6007199 intergenic CG9098 -,Gal - chr2L_13_6005001 chr2L_6005001 RAL-306_125b 186 chr2L 6136511 6136574 chr2L 6136658 6136721 11 146 5.5 9.0 7.2 1.3 210 chr2L 6136511 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136721 intergenic not near genes chr2L_11_6135001 chr2L_6135001 RAL-306_125b 187 chr2L 6185394 6185399 chr2L 6185522 6185527 4 128 16.5 5.5 11.0 0.3 133 chr2L 6185394 intron CG34380 + chr2L 6185460 intron CG34380 + chr2L 6185527 intron CG34380 + chr2L_4_6185001 chr2L_6185001 RAL-306_125b 188 chr2L 6185400 6185435 chr2L 6185520 6185563 11 122 11.5 5.0 8.2 1.2 163 chr2L 6185400 intron CG34380 + chr2L 6185482 intron CG34380 + chr2L 6185563 intron CG34380 + chr2L_11_6185001 chr2L_6185001 RAL-306_125b 189 chr2L 6185436 6185469 chr2L 6185519 6185589 11 116 7.0 4.5 5.8 1.6 153 chr2L 6185436 intron CG34380 + chr2L 6185512 intron CG34380 + chr2L 6185589 intron CG34380 + chr2L_11_6185001 chr2L_6185001 RAL-306_125b 190 chr2L 6242927 6242982 chr2L 6243075 6243129 17 148 8.0 7.0 7.5 2.0 202 chr2L 6242927 intergenic not near genes chr2L 6243028 intergenic not near genes chr2L 6243129 intergenic not near genes chr2L_17_6240001 chr2L_6240001 RAL-306_125b 191 chr2L 6283892 6283973 chr2L 6284053 6284135 17 161 5.5 0.0 2.8 4.5 243 chr2L 6283892 intron Ddr + chr2L 6284014 intron Ddr + chr2L 6284135 intron Ddr + chr2L_17_6280001 chr2L_6280001 RAL-306_125b 192 chr2L 6313283 6313291 chr2L 6313460 6313462 4 176 0.0 16.0 8.0 0.4 179 chr2L 6313283 intron Ddr + chr2L 6313372 intron Ddr + chr2L 6313462 intron Ddr + chr2L_4_6310001 chr2L_6310001 RAL-306_125b 193 chr2L 6313319 6313322 chr2L 6313446 6313499 5 167 0.0 14.5 7.2 0.6 180 chr2L 6313319 intron Ddr + chr2L 6313409 intron Ddr + chr2L 6313499 intron Ddr + chr2L_5_6310001 chr2L_6310001 RAL-306_125b 194 chr2L 6316294 6316306 chr2L 6316432 6316444 6 138 0.0 11.5 5.8 0.9 150 chr2L 6316294 intron Ddr + chr2L 6316369 intron Ddr + chr2L 6316444 intron Ddr + chr2L_6_6315001 chr2L_6315001 RAL-306_125b 195 chr2L 6349033 6349072 chr2L 6349161 6349200 12 128 7.0 9.5 8.2 1.3 167 chr2L 6349033 intergenic CG9498 - chr2L 6349116 intergenic CG9498 - chr2L 6349200 intergenic CG9498 - chr2L_12_6345001 chr2L_6345001 RAL-306_125b 196 chr2L 6363102 6363178 chr2L 6366074 6366148 Burdock 28 2966 9.0 1.0 5.0 4.7 3046 chr2L 6363102 intergenic not near genes chr2L 6364625 intergenic not near genes chr2L 6366148 intergenic not near genes chr2L_28_6360001 chr2L_6360001 RAL-306_125b 197 chr2L 6426810 6426877 chr2L 6445120 6445187 roo 29 18308 9.0 8.5 8.8 3.0 18377 chr2L 6426810 3` UTR CG9527 - chr2L 6435998 intron CG9527 - chr2L 6445187 exon CG9527 - chr2L_29_6435001 chr2L_6435001 RAL-306_125b 198 chr2L 6522893 6522949 chr2L 6523024 6523080 19 129 4.0 4.5 4.2 3.7 187 chr2L 6522893 intron CG31637 + chr2L 6522986 intron CG31637 + chr2L 6523080 intron CG31637 + chr2L_19_6520001 chr2L_6520001 RAL-306_125b 199 chr2L 6527204 6527238 chr2L 6527333 6527367 13 129 2.5 10.5 6.5 1.7 163 chr2L 6527204 intergenic CG31637 +,eya - chr2L 6527286 intergenic eya -,CG31637 + chr2L 6527367 intergenic eya -,CG31637 + chr2L_13_6525001 chr2L_6525001 RAL-306_125b 200 chr2L 6544328 6544394 chr2L 6544470 6544536 23 141 4.0 8.5 6.2 3.2 208 chr2L 6544328 intron eya - chr2L 6544432 intron eya - chr2L 6544536 intron eya - chr2L_23_6540001 chr2L_6540001 RAL-306_125b 201 chr2L 6590051 6590120 chr2L 6590179 6590248 13 123 8.0 0.5 4.2 2.5 197 chr2L 6590051 intron CG11319 - chr2L 6590150 intron CG11319 - chr2L 6590248 intron CG11319 - chr2L_13_6590001 chr2L_6590001 RAL-306_125b 202 chr2L 6655475 6655546 chr2L 6655887 6655958 19 404 3.0 7.5 5.2 3.1 483 chr2L 6655475 exon CG31633 - chr2L 6655716 exon CG31633 - chr2L 6655958 exon CG31633 - chr2L_19_6655001 chr2L_6655001 RAL-306_125b 203 chr2L 6756796 6756801 chr2L 6756940 6756945 5 144 15.5 8.5 12.0 0.4 149 chr2L 6756796 intergenic not near genes chr2L 6756870 intergenic not near genes chr2L 6756945 intergenic not near genes chr2L_5_6755001 chr2L_6755001 RAL-306_125b 204 chr2L 6756802 6756871 chr2L 6756939 6757015 20 139 7.0 8.5 7.8 2.3 213 chr2L 6756802 intergenic not near genes chr2L 6756908 intergenic not near genes chr2L 6757015 intergenic not near genes chr2L_20_6755001 chr2L_6755001 RAL-306_125b 205 chr2L 6771988 6772014 chr2L 6772072 6772151 4 106 7.0 3.0 5.0 0.7 163 chr2L 6771988 intron CG11321 - chr2L 6772070 intron CG11321 - chr2L 6772151 intron CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-306_125b 206 chr2L 6795170 6795239 chr2L 6795301 6795370 23 127 8.0 8.0 8.0 2.6 200 chr2L 6795170 intron nrv2 - chr2L 6795270 intron nrv2 - chr2L 6795370 intron nrv2 - chr2L_23_6795001 chr2L_6795001 RAL-306_125b 207 chr2L 6799495 6799547 chr2L 6799633 6799685 17 138 12.0 9.0 10.5 1.5 190 chr2L 6799495 5` UTR CR43610 + chr2L 6799590 5` UTR CR43610 + chr2L 6799685 intergenic CR43610 +,CG17376 - chr2L_17_6795001 chr2L_6795001 RAL-306_125b 208 chr2L 6850338 6850402 chr2L 6850471 6850535 11 133 7.5 7.5 7.5 1.3 197 chr2L 6850338 intergenic not near genes chr2L 6850436 intergenic not near genes chr2L 6850535 intergenic not near genes chr2L_11_6850001 chr2L_6850001 RAL-306_125b 209 chr2L 6850403 6850408 chr2L 6850460 6850541 4 102 6.5 7.5 7.0 0.5 138 chr2L 6850403 intergenic not near genes chr2L 6850472 intergenic not near genes chr2L 6850541 intergenic not near genes chr2L_4_6850001 chr2L_6850001 RAL-306_125b 210 chr2L 6876736 6876809 chr2L 6882977 6883004 diver 23 6229 7.5 4.5 6.0 3.3 6268 chr2L 6876736 intron Nlg2 + chr2L 6879870 intron Nlg2 + chr2L 6883004 intron Nlg2 + chr2L_23_6875001 chr2L_6875001 RAL-306_125b 211 chr2L 6887483 6887524 chr2L 6887648 6887726 9 198 6.0 2.5 4.2 1.7 243 chr2L 6887483 intron Nlg2 + chr2L 6887604 intron Nlg2 + chr2L 6887726 intron Nlg2 + chr2L_9_6885001 chr2L_6885001 RAL-306_125b 212 chr2L 6991391 6991434 chr2L 6998551 6998605 HMS-Beagle 6 7170 0.0 8.5 4.2 1.2 7214 chr2L 6991391 intron uif - chr2L 6994998 intron uif - chr2L 6998605 intron uif - chr2L_6_6990001 chr2L_6990001 RAL-306_125b 213 chr2L 7003777 7003792 chr2L 7003926 7003942 6 150 16.0 9.0 12.5 0.4 165 chr2L 7003777 intron uif - chr2L 7003860 intron uif - chr2L 7003942 intron uif - chr2L_6_7000001 chr2L_7000001 RAL-306_125b 214 chr2L 7003798 7003818 chr2L 7003925 7003968 8 147 12.0 9.0 10.5 0.7 170 chr2L 7003798 intron uif - chr2L 7003883 intron uif - chr2L 7003968 intron uif - chr2L_8_7000001 chr2L_7000001 RAL-306_125b 215 chr2L 7007683 7007728 chr2L 7007813 7007849 11 125 15.5 8.5 12.0 0.8 166 chr2L 7007683 intron uif - chr2L 7007766 intron uif - chr2L 7007849 intron uif - chr2L_11_7005001 chr2L_7005001 RAL-306_125b 216 chr2L 7030044 7030050 chr2L 7030175 7030180 6 131 13.0 8.5 10.8 0.5 136 chr2L 7030044 intergenic Rab30 - chr2L 7030112 intergenic Rab30 - chr2L 7030180 intergenic Rab30 - chr2L_6_7030001 chr2L_7030001 RAL-306_125b 217 chr2L 7030051 7030102 chr2L 7030161 7030233 13 126 7.0 7.5 7.2 1.6 182 chr2L 7030051 intergenic Rab30 - chr2L 7030142 intergenic Rab30 - chr2L 7030233 intergenic Rab30 - chr2L_13_7030001 chr2L_7030001 RAL-306_125b 218 chr2L 7041235 7041285 chr2L 7041368 7041424 27 138 0.0 7.0 3.5 6.0 189 chr2L 7041235 intron milt + chr2L 7041330 intron milt + chr2L 7041424 intron milt + chr2L_27_7040001 chr2L_7040001 RAL-306_125b 219 chr2L 7043502 7043531 chr2L 7043686 7043715 13 184 1.5 13.5 7.5 1.5 213 chr2L 7043502 intron milt + chr2L 7043608 intron milt + chr2L 7043715 intron milt + chr2L_13_7040001 chr2L_7040001 RAL-306_125b 220 chr2L 7082853 7082887 chr2L 7082990 7083024 14 137 8.5 10.0 9.2 1.4 171 chr2L 7082853 intron Pvf2 - chr2L 7082938 intron Pvf2 - chr2L 7083024 intron Pvf2 - chr2L_14_7080001 chr2L_7080001 RAL-306_125b 221 chr2L 7103030 7103094 chr2L 7103291 7103363 9 264 1.5 2.0 1.8 3.2 333 chr2L 7103030 intron Pvf3 - chr2L 7103196 intron Pvf3 - chr2L 7103363 intron Pvf3 - chr2L_9_7100001 chr2L_7100001 RAL-306_125b 222 chr2L 7111734 7111789 chr2L 7111864 7111925 7 135 4.5 1.0 2.8 1.8 191 chr2L 7111734 intron Pvf3 - chr2L 7111830 intron Pvf3 - chr2L 7111925 intron Pvf3 - chr2L_7_7110001 chr2L_7110001 RAL-306_125b 223 chr2L 7125750 7125798 chr2L 7125910 7125929 14 163 12.5 10.0 11.2 1.1 179 chr2L 7125750 intron Pvf3 - chr2L 7125840 intron Pvf3 - chr2L 7125929 intron Pvf3 - chr2L_14_7125001 chr2L_7125001 RAL-306_125b 224 chr2L 7126819 7126850 chr2L 7126942 7126979 9 128 7.5 0.0 3.8 1.9 160 chr2L 7126819 intron Pvf3 - chr2L 7126899 intron Pvf3 - chr2L 7126979 intron Pvf3 - chr2L_9_7125001 chr2L_7125001 RAL-306_125b 225 chr2L 7165751 7165808 chr2L 7165880 7165939 23 130 5.5 9.0 7.2 2.8 188 chr2L 7165751 intergenic not near genes chr2L 7165845 intergenic not near genes chr2L 7165939 intergenic not near genes chr2L_23_7165001 chr2L_7165001 RAL-306_125b 226 chr2L 7197946 7198022 chr2L 7198075 7198151 36 128 6.5 7.5 7.0 4.5 205 chr2L 7197946 intron CG4502 - chr2L 7198048 intron CG4502 - chr2L 7198151 intron CG4502 - chr2L_36_7195001 chr2L_7195001 RAL-306_125b 227 chr2L 7235070 7235142 chr2L 7235213 7235271 14 142 2.0 5.5 3.8 2.9 201 chr2L 7235070 intron Ndae1 - chr2L 7235170 intron Ndae1 - chr2L 7235271 intron Ndae1 - chr2L_14_7235001 chr2L_7235001 RAL-306_125b 228 chr2L 7244698 7244702 chr2L 7244873 7244877 4 175 25.5 21.0 23.2 0.2 179 chr2L 7244698 intron Ndae1 - chr2L 7244788 intron Ndae1 - chr2L 7244877 intron Ndae1 - chr2L_4_7240001 chr2L_7240001 RAL-306_125b 229 chr2L 7246506 7246563 chr2L 7247415 7247471 12 909 1.5 6.0 3.8 2.5 965 chr2L 7246506 intron Ndae1 - chr2L 7246988 intron Ndae1 - chr2L 7247471 intron Ndae1 - chr2L_12_7245001 chr2L_7245001 RAL-306_125b 230 chr2L 7325891 7325929 chr2L 7326026 7326064 12 134 6.0 6.0 6.0 1.7 173 chr2L 7325891 intergenic not near genes chr2L 7325978 intergenic not near genes chr2L 7326064 intergenic not near genes chr2L_12_7325001 chr2L_7325001 RAL-306_125b 231 chr2L 7326436 7326483 chr2L 7326604 7326651 11 167 16.5 6.5 11.5 0.9 215 chr2L 7326436 intergenic not near genes chr2L 7326544 intergenic not near genes chr2L 7326651 intergenic not near genes chr2L_11_7325001 chr2L_7325001 RAL-306_125b 232 chr2L 7330221 7330290 chr2L 7330350 7330419 11 129 8.5 4.5 6.5 1.5 198 chr2L 7330221 intergenic not near genes chr2L 7330320 intergenic not near genes chr2L 7330419 intergenic not near genes chr2L_11_7330001 chr2L_7330001 RAL-306_125b 233 chr2L 7336843 7336914 chr2L 7336976 7337042 30 130 4.0 6.5 5.2 4.8 199 chr2L 7336843 intron Wnt6 + chr2L 7336942 intron Wnt6 + chr2L 7337042 intron Wnt6 + chr2L_30_7335001 chr2L_7335001 RAL-306_125b 234 chr2L 7343286 7343334 chr2L 7350452 7350499 roo 8 7164 5.5 8.5 7.0 1.0 7213 chr2L 7343286 intron Wnt6 + chr2L 7346892 intron Wnt6 + chr2L 7350499 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RAL-306_125b 235 chr2L 7394910 7394961 chr2L 7395056 7395107 16 146 18.5 8.5 13.5 1.1 197 chr2L 7394910 intron CG5160 - chr2L 7395008 intron CG5160 - chr2L 7395107 intron CG5160 - chr2L_16_7395001 chr2L_7395001 RAL-306_125b 236 chr2L 7406962 7406972 chr2L 7407119 7407129 5 157 0.0 0.0 0.0 5.0 167 chr2L 7406962 intron CG5177 + chr2L 7407046 intron CG5177 + chr2L 7407129 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-306_125b 237 chr2L 7432183 7432252 chr2L 7432315 7432384 26 130 6.0 6.5 6.2 3.6 201 chr2L 7432183 intron CG5958 - chr2L 7432284 intron CG5958 - chr2L 7432384 intron CG5958 - chr2L_26_7430001 chr2L_7430001 RAL-306_125b 238 chr2L 5904538 5904541 chr2L 7466148 7466150 12 1561609 5.0 4.5 4.8 2.1 1561612 chr2L 5904538 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466150 intergenic CG6055 + chr2L_12_6685001 chr2L_6685001 RAL-306_125b 239 chr2L 7493359 7493421 chr2L 7493500 7493557 9 133 0.0 8.5 4.2 1.7 198 chr2L 7493359 intron Ziz - chr2L 7493458 intron Ziz - chr2L 7493557 intron Ziz - chr2L_9_7490001 chr2L_7490001 RAL-306_125b 240 chr2L 7493628 7493686 chr2L 7493889 7493931 11 255 7.0 2.5 4.8 1.9 303 chr2L 7493628 intron Ziz - chr2L 7493780 intron Ziz - chr2L 7493931 intron Ziz - chr2L_11_7490001 chr2L_7490001 RAL-306_125b 241 chr2L 7535784 7535855 chr2L 7535922 7535994 15 134 5.5 7.0 6.2 2.1 210 chr2L 7535784 intron RapGAP1 - chr2L 7535889 intron RapGAP1 - chr2L 7535994 intron RapGAP1 - chr2L_15_7535001 chr2L_7535001 RAL-306_125b 242 chr2L 7548062 7548105 chr2L 7550554 7550596 Burdock 7 2491 7.5 0.5 4.0 1.4 2534 chr2L 7548062 intron RapGAP1 - chr2L 7549329 intron RapGAP1 - chr2L 7550596 intron RapGAP1 - chr2L_7_7545001 chr2L_7545001 RAL-306_125b 243 chr2L 7569666 7569740 chr2L 7571010 7571053 16 1338 26.5 34.0 30.2 0.5 1387 chr2L 7569666 intron RapGAP1 - chr2L 7570360 intron RapGAP1 - chr2L 7571053 intron RapGAP1 - chr2L_16_7570001 chr2L_7570001 RAL-306_125b 244 chr2L 7568813 7568824 chr2L 7571387 7571398 9 2574 8.5 50.5 29.5 0.3 2585 chr2L 7568813 intron RapGAP1 - chr2L 7570106 intron RapGAP1 - chr2L 7571398 intron RapGAP1 - chr2L_9_7570001 chr2L_7570001 RAL-306_125b 245 chr2L 7579140 7579233 chr2L 7579381 7579463 BS 17 234 1.0 0.0 0.5 11.3 323 chr2L 7579140 intergenic RapGAP1 - chr2L 7579302 intergenic RapGAP1 - chr2L 7579463 intergenic RapGAP1 - chr2L_17_7575001 chr2L_7575001 RAL-306_125b 246 chr2L 7585458 7585496 chr2L 7585607 7585645 5 149 3.5 5.5 4.5 0.9 187 chr2L 7585458 intergenic not near genes chr2L 7585552 intergenic not near genes chr2L 7585645 intergenic not near genes chr2L_5_7585001 chr2L_7585001 RAL-306_125b 247 chr2L 7656052 7656074 chr2L 7656180 7656236 7 151 6.0 5.0 5.5 1.1 184 chr2L 7656052 exon Slob - chr2L 7656144 exon Slob - chr2L 7656236 exon Slob - chr2L_7_7655001 chr2L_7655001 RAL-306_125b 248 chr2L 7766581 7766657 chr2L 7766707 7766783 14 120 9.5 5.0 7.2 1.7 202 chr2L 7766581 intergenic not near genes chr2L 7766682 intergenic not near genes chr2L 7766783 intergenic not near genes chr2L_14_7765001 chr2L_7765001 RAL-306_125b 249 chr2L 7770562 7770580 chr2L 7770733 7770751 4 171 4.0 0.5 2.2 1.2 189 chr2L 7770562 intron CG7191 + chr2L 7770656 intron CG7191 + chr2L 7770751 intron CG7191 + chr2L_4_7770001 chr2L_7770001 RAL-306_125b 250 chr2L 7829448 7829460 chr2L 7829588 7829605 7 144 14.0 7.0 10.5 0.6 157 chr2L 7829448 intron mts + chr2L 7829526 intron mts + chr2L 7829605 intron mts + chr2L_7_7825001 chr2L_7825001 RAL-306_125b 251 chr2L 7829470 7829512 chr2L 7829585 7829657 12 140 6.0 6.5 6.2 1.7 187 chr2L 7829470 intron mts + chr2L 7829564 intron mts + chr2L 7829657 intron mts + chr2L_12_7825001 chr2L_7825001 RAL-306_125b 252 chr2L 7867532 7867593 chr2L 7867666 7867732 19 142 8.5 13.0 10.8 1.6 200 chr2L 7867532 intron Proc - chr2L 7867632 intron Proc - chr2L 7867732 intron Proc - chr2L_19_7865001 chr2L_7865001 RAL-306_125b 253 chr2L 7887660 7887676 chr2L 7887792 7887808 10 132 4.5 14.0 9.2 1.0 148 chr2L 7887660 intergenic Spn28Da -,CG7102 - chr2L 7887734 3` UTR Spn28Da - chr2L 7887808 exon Spn28Da - chr2L_10_7885001 chr2L_7885001 RAL-306_125b 254 chr2L 7921051 7921118 chr2L 7921189 7921250 12 134 4.5 4.5 4.5 2.2 199 chr2L 7921051 intron Snoo - chr2L 7921150 intron Snoo - chr2L 7921250 intron Snoo - chr2L_12_7920001 chr2L_7920001 RAL-306_125b 255 chr2L 7958994 7959071 chr2L 7960455 7960517 pogo 17 1455 5.5 3.5 4.5 3.1 1523 chr2L 7958994 intron Snoo - chr2L 7959756 intron Snoo - chr2L 7960517 intron Snoo - chr2L_17_7955001 chr2L_7955001 RAL-306_125b 256 chr2L 7977045 7977064 chr2L 7984070 7984089 297 6 7025 13.5 6.5 10.0 0.5 7044 chr2L 7977045 intron Snoo - chr2L 7980567 intron Snoo - chr2L 7984089 intron,5` UTR Snoo -,CG7231 + chr2L_6_7980001 chr2L_7980001 RAL-306_125b 257 chr2L 7977069 7977110 chr2L 7984067 7984129 297 16 7020 5.0 6.0 5.5 2.5 7060 chr2L 7977069 intron Snoo - chr2L 7980599 intron Snoo - chr2L 7984129 intron,5` UTR Snoo -,CG7231 + chr2L_16_7980001 chr2L_7980001 RAL-306_125b 258 chr2L 7986884 7986918 chr2L 7987015 7987055 7 136 7.5 16.0 11.8 0.5 171 chr2L 7986884 3` UTR pes - chr2L 7986970 3` UTR pes - chr2L 7987055 3` UTR pes - chr2L_7_7985001 chr2L_7985001 RAL-306_125b 259 chr2L 8013599 8013640 chr2L 8023585 8023626 copia 21 9985 9.5 7.5 8.5 2.2 10027 chr2L 8013599 intron Tg + chr2L 8018612 intron Tg + chr2L 8023626 intron Tg + chr2L_21_8015001 chr2L_8015001 RAL-306_125b 260 chr2L 8167106 8167170 chr2L 8167247 8167310 34 139 5.5 8.0 6.8 4.4 204 chr2L 8167106 intron Piezo + chr2L 8167208 intron Piezo + chr2L 8167310 intron Piezo + chr2L_34_8165001 chr2L_8165001 RAL-306_125b 261 chr2L 8205566 8205618 chr2L 8205713 8205765 16 145 10.5 10.0 10.2 1.4 199 chr2L 8205566 3` UTR CR44120 - chr2L 8205666 intergenic CR44120 -,CR44121 -,CR44119 + chr2L 8205765 intergenic CR44121 -,CR44120 -,CG8419 +,CR44119 + chr2L_16_8205001 chr2L_8205001 RAL-306_125b 262 chr2L 8244683 8244749 chr2L 8244855 8244911 17 168 2.0 7.5 4.8 2.9 228 chr2L 8244683 intron CG8086 - chr2L 8244797 intron CG8086 - chr2L 8244911 intron CG8086 - chr2L_17_8240001 chr2L_8240001 RAL-306_125b 263 chr2L 8271579 8271654 chr2L 8271705 8271780 13 126 4.0 9.0 6.5 1.7 201 chr2L 8271579 intron Btk29A - chr2L 8271680 intron Btk29A - chr2L 8271780 intron Btk29A - chr2L_13_8270001 chr2L_8270001 RAL-306_125b 264 chr2L 8286252 8286316 chr2L 8286389 8286453 22 131 9.5 12.0 10.8 1.9 201 chr2L 8286252 intron Btk29A - chr2L 8286352 intron Btk29A - chr2L 8286453 intron Btk29A - chr2L_22_8285001 chr2L_8285001 RAL-306_125b 265 chr2L 8322909 8322930 chr2L 8323035 8323056 8 126 3.5 8.0 5.8 1.2 147 chr2L 8322909 exon CG7781 - chr2L 8322982 intron CG7781 - chr2L 8323056 intron CG7781 - chr2L_8_8320001 chr2L_8320001 RAL-306_125b 266 chr2L 8324080 8324153 chr2L 8324222 8324295 33 142 4.0 8.0 6.0 4.7 215 chr2L 8324080 intron CG7781 - chr2L 8324188 intron CG7781 - chr2L 8324295 intron CG7781 - chr2L_33_8320001 chr2L_8320001 RAL-306_125b 267 chr2L 8350938 8350961 chr2L 8351211 8351234 9 273 0.0 6.0 3.0 2.2 296 chr2L 8350938 3` UTR CG7778 + chr2L 8351086 3` UTR CG7778 + chr2L 8351234 intergenic CG7778 + chr2L_9_8350001 chr2L_8350001 RAL-306_125b 268 chr2L 8351508 8351510 chr2L 8351635 8351637 4 127 0.0 5.0 2.5 1.1 129 chr2L 8351508 intergenic CG7778 + chr2L 8351572 intergenic CG7778 + chr2L 8351637 intergenic not near genes chr2L_4_8350001 chr2L_8350001 RAL-306_125b 269 chr2L 8452380 8452447 chr2L 8461601 8461638 roo 20 9218 7.0 7.5 7.2 2.4 9258 chr2L 8452380 intron fu12 - chr2L 8457009 intron fu12 - chr2L 8461638 intron fu12 - chr2L_20_8455001 chr2L_8455001 RAL-306_125b 270 chr2L 8508972 8509005 chr2L 8509124 8509157 11 152 0.0 3.5 1.8 3.9 185 chr2L 8508972 intergenic CG13096 - chr2L 8509064 intergenic CG13096 - chr2L 8509157 3` UTR CG13096 - chr2L_11_8505001 chr2L_8505001 RAL-306_125b 271 chr2L 8538119 8538179 chr2L 8538242 8538300 4 119 8.0 2.0 5.0 0.7 181 chr2L 8538119 intron CG17834 + chr2L 8538210 intron CG17834 + chr2L 8538300 intron CG17834 + chr2L_4_8535001 chr2L_8535001 RAL-306_125b 272 chr2L 8551386 8551433 chr2L 8551651 8551698 8 264 5.0 6.5 5.8 1.2 312 chr2L 8551386 intron Sema-1a + chr2L 8551542 intron Sema-1a + chr2L 8551698 intron Sema-1a + chr2L_8_8550001 chr2L_8550001 RAL-306_125b 273 chr2L 8580151 8580217 chr2L 8580282 8580348 19 130 7.0 6.0 6.5 2.5 197 chr2L 8580151 intron Sema-1a + chr2L 8580250 intron Sema-1a + chr2L 8580348 intron Sema-1a + chr2L_19_8580001 chr2L_8580001 RAL-306_125b 274 chr2L 8588852 8588923 chr2L 8588993 8589064 15 138 2.0 4.5 3.2 3.6 212 chr2L 8588852 intron Sema-1a + chr2L 8588958 intron Sema-1a + chr2L 8589064 intron Sema-1a + chr2L_15_8585001 chr2L_8585001 RAL-306_125b 275 chr2L 8594424 8594486 chr2L 8601528 8601590 297 21 7103 10.0 10.5 10.2 1.9 7166 chr2L 8594424 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598007 intron Sema-1a + chr2L 8601590 intron Sema-1a + chr2L_21_8595001 chr2L_8595001 RAL-306_125b 276 chr2L 8612809 8612870 chr2L 8612936 8612997 22 125 13.0 11.0 12.0 1.7 188 chr2L 8612809 intron Sema-1a + chr2L 8612903 intron Sema-1a + chr2L 8612997 intron Sema-1a + chr2L_22_8610001 chr2L_8610001 RAL-306_125b 277 chr2L 8625239 8625258 chr2L 8625451 8625474 9 215 12.0 1.5 6.8 1.2 235 chr2L 8625239 intron Sema-1a + chr2L 8625356 intron Sema-1a + chr2L 8625474 intron Sema-1a + chr2L_9_8625001 chr2L_8625001 RAL-306_125b 278 chr2L 8625261 8625528 chr2L 8625440 8625703 37 186 1.0 1.0 1.0 18.5 442 chr2L 8625261 intron Sema-1a + chr2L 8625482 intron Sema-1a + chr2L 8625703 intron Sema-1a + chr2L_37_8625001 chr2L_8625001 RAL-306_125b 279 chr2L 8687036 8687092 chr2L 8687190 8687246 10 154 5.5 9.5 7.5 1.2 210 chr2L 8687036 3` UTR Trs23 + chr2L 8687141 intergenic Hnf4 -,Trs23 + chr2L 8687246 3` UTR Hnf4 - chr2L_10_8685001 chr2L_8685001 RAL-306_125b 280 chr2L 8723085 8723141 chr2L 8731511 8731568 Tirant 23 8426 5.0 7.5 6.2 3.2 8483 chr2L 8723085 intron raw - chr2L 8727326 intron raw - chr2L 8731568 intron raw - chr2L_23_8725001 chr2L_8725001 RAL-306_125b 281 chr2L 8736219 8736259 chr2L 8736349 8736389 15 130 0.5 7.0 3.8 3.1 170 chr2L 8736219 intron raw - chr2L 8736304 intron raw - chr2L 8736389 intron raw - chr2L_15_8735001 chr2L_8735001 RAL-306_125b 282 chr2L 8772744 8772819 chr2L 8772879 8772958 14 136 3.5 0.0 1.8 5.0 214 chr2L 8772744 intergenic CG9466 -,CG9465 - chr2L 8772851 intergenic CG9466 - chr2L 8772958 3` UTR CG9466 - chr2L_14_8770001 chr2L_8770001 RAL-306_125b 283 chr2L 8789293 8789331 chr2L 8789388 8789457 5 111 9.5 9.5 9.5 0.5 164 chr2L 8789293 intergenic not near genes chr2L 8789375 intergenic not near genes chr2L 8789457 intergenic not near genes chr2L_5_8785001 chr2L_8785001 RAL-306_125b 284 chr2L 8813831 8813851 chr2L 8813958 8813978 4 124 3.0 11.0 7.0 0.5 147 chr2L 8813831 intergenic not near genes chr2L 8813904 intergenic not near genes chr2L 8813978 intergenic not near genes chr2L_4_8810001 chr2L_8810001 RAL-306_125b 285 chr2L 8820879 8820948 chr2L 8821008 8821077 26 128 5.0 6.5 5.8 3.8 198 chr2L 8820879 intergenic not near genes chr2L 8820978 intergenic not near genes chr2L 8821077 intergenic not near genes chr2L_26_8820001 chr2L_8820001 RAL-306_125b 286 chr2L 8877630 8877667 chr2L 8877758 8877795 24 126 9.5 10.5 10.0 2.2 165 chr2L 8877630 intergenic not near genes chr2L 8877712 intergenic not near genes chr2L 8877795 intergenic not near genes chr2L_24_8875001 chr2L_8875001 RAL-306_125b 287 chr2L 8886625 8886701 chr2L 8886762 8886833 14 134 4.0 2.0 3.0 3.5 208 chr2L 8886625 intergenic CR44415 - chr2L 8886729 intergenic CR44415 - chr2L 8886833 3` UTR CR44415 - chr2L_14_8885001 chr2L_8885001 RAL-306_125b 288 chr2L 8891855 8891899 chr2L 8891983 8892028 8 129 5.5 11.0 8.2 0.9 173 chr2L 8891855 3` UTR CG42713 + chr2L 8891942 3` UTR CG42713 + chr2L 8892028 3` UTR CG42713 + chr2L_8_8890001 chr2L_8890001 RAL-306_125b 289 chr2L 8894666 8894666 chr2L 17158908 17158908 4 8264242 26.5 0.0 13.2 0.3 8264242 chr2L 8894666 intergenic not near genes chr2L 13026787 intron CG9932 - chr2L 17158908 intron,intron CG34106 +,beat-IIIa + chr2L_4_13025001 chr2L_13025001 RAL-306_125b 290 chr2L 8910780 8910796 chr2L 8911095 8911126 5 329 5.0 5.0 5.0 0.8 346 chr2L 8910780 intron CG34398 + chr2L 8910953 intron CG34398 + chr2L 8911126 intron CG34398 + chr2L_5_8910001 chr2L_8910001 RAL-306_125b 291 chr2L 8946653 8946727 chr2L 8946812 8946886 20 157 8.5 10.5 9.5 1.9 233 chr2L 8946653 intron C1GalTA - chr2L 8946770 intron C1GalTA - chr2L 8946886 intron C1GalTA - chr2L_20_8945001 chr2L_8945001 RAL-306_125b 292 chr2L 8959262 8959324 chr2L 8959390 8959445 19 127 5.0 9.5 7.2 2.3 183 chr2L 8959262 3` UTR CG9525 - chr2L 8959354 3` UTR CG9525 - chr2L 8959445 3` UTR CG9525 - chr2L_19_8955001 chr2L_8955001 RAL-306_125b 293 chr2L 9000280 9000307 chr2L 9007834 9007875 roo 12 7563 5.0 0.5 2.8 3.2 7595 chr2L 9000280 intergenic Try29F + chr2L 9004078 intergenic not near genes chr2L 9007875 intergenic not near genes chr2L_12_9000001 chr2L_9000001 RAL-306_125b 294 chr2L 9069635 9069654 chr2L 9069776 9069790 7 140 0.0 2.0 1.0 3.5 155 chr2L 9069635 intron CG31708 - chr2L 9069712 intron CG31708 - chr2L 9069790 intron CG31708 - chr2L_7_9065001 chr2L_9065001 RAL-306_125b 295 chr2L 9084336 9084340 chr2L 16217660 16217660 5 7133321 19.5 20.5 20.0 0.2 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-306_125b 296 chr2L 9085903 9085914 chr2L 9086034 9086045 4 131 0.0 13.0 6.5 0.5 142 chr2L 9085903 intron Toll-4 + chr2L 9085974 intron Toll-4 + chr2L 9086045 intron Toll-4 + chr2L_4_9085001 chr2L_9085001 RAL-306_125b 297 chr2L 9095527 9095595 chr2L 9095664 9095732 17 137 4.5 5.0 4.8 2.9 205 chr2L 9095527 intergenic not near genes chr2L 9095630 intergenic not near genes chr2L 9095732 intergenic not near genes chr2L_17_9095001 chr2L_9095001 RAL-306_125b 298 chr2L 9113750 9113810 chr2L 9113910 9113965 12 158 7.5 5.5 6.5 1.6 215 chr2L 9113750 intergenic Or30a + chr2L 9113858 intergenic not near genes chr2L 9113965 intergenic not near genes chr2L_12_9110001 chr2L_9110001 RAL-306_125b 299 chr2L 9115598 9115652 chr2L 9115729 9115800 5 137 0.5 9.0 4.8 0.9 202 chr2L 9115598 intergenic not near genes chr2L 9115699 intergenic not near genes chr2L 9115800 intergenic not near genes chr2L_5_9115001 chr2L_9115001 RAL-306_125b 300 chr2L 9158743 9158828 chr2L 9158890 9158978 13 148 4.5 0.0 2.2 4.1 235 chr2L 9158743 intron CG32982 + chr2L 9158860 intron CG32982 + chr2L 9158978 intron CG32982 + chr2L_13_9155001 chr2L_9155001 RAL-306_125b 301 chr2L 9164179 9164225 chr2L 9164296 9164345 8 116 8.0 4.5 6.2 1.1 166 chr2L 9164179 intergenic CG13108 +,CG32982 + chr2L 9164262 5` UTR CG13108 + chr2L 9164345 5` UTR CG13108 + chr2L_8_9160001 chr2L_9160001 RAL-306_125b 302 chr2L 9214122 9214181 chr2L 9214248 9214307 20 121 8.0 4.5 6.2 2.8 185 chr2L 9214122 intron tai + chr2L 9214214 intron tai + chr2L 9214307 intron tai + chr2L_20_9210001 chr2L_9210001 RAL-306_125b 303 chr2L 9217944 9217999 chr2L 9222781 9222844 Doc 7 4840 3.5 0.0 1.8 2.5 4900 chr2L 9217944 intron tai + chr2L 9220394 intron tai + chr2L 9222844 intron tai + chr2L_7_9220001 chr2L_9220001 RAL-306_125b 304 chr2L 9225373 9225432 chr2L 9225503 9225541 7 122 3.0 8.0 5.5 1.1 168 chr2L 9225373 intron tai + chr2L 9225457 intron tai + chr2L 9225541 intron tai + chr2L_7_9225001 chr2L_9225001 RAL-306_125b 305 chr2L 9227188 9227244 chr2L 9227313 9227377 8 127 5.5 5.5 5.5 1.2 189 chr2L 9227188 intron tai + chr2L 9227282 intron tai + chr2L 9227377 intron tai + chr2L_8_9225001 chr2L_9225001 RAL-306_125b 306 chr2L 9234889 9234894 chr2L 9235021 9235026 4 132 0.0 15.0 7.5 0.5 137 chr2L 9234889 intron tai + chr2L 9234958 intron tai + chr2L 9235026 intron tai + chr2L_4_9230001 chr2L_9230001 RAL-306_125b 307 chr2L 9234895 9234929 chr2L 9235020 9235061 14 131 0.0 15.0 7.5 1.6 166 chr2L 9234895 intron tai + chr2L 9234978 intron tai + chr2L 9235061 intron tai + chr2L_14_9230001 chr2L_9230001 RAL-306_125b 308 chr2L 9283156 9283179 chr2L 9283283 9283306 6 127 12.0 8.5 10.2 0.5 150 chr2L 9283156 intron Ggamma30A + chr2L 9283231 intron Ggamma30A + chr2L 9283306 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-306_125b 309 chr2L 9284978 9285044 chr2L 9285104 9285155 15 114 6.0 5.0 5.5 2.3 177 chr2L 9284978 intron Ggamma30A + chr2L 9285066 intron Ggamma30A + chr2L 9285155 intron Ggamma30A + chr2L_15_9285001 chr2L_9285001 RAL-306_125b 310 chr2L 9287275 9287292 chr2L 9287422 9287439 5 144 18.0 0.0 9.0 0.5 164 chr2L 9287275 intron Ggamma30A + chr2L 9287357 intron Ggamma30A + chr2L 9287439 intron Ggamma30A + chr2L_5_9285001 chr2L_9285001 RAL-306_125b 311 chr2L 9297328 9297400 chr2L 9297455 9297527 33 126 6.5 7.0 6.8 4.2 199 chr2L 9297328 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297527 3` UTR Ggamma30A + chr2L_33_9295001 chr2L_9295001 RAL-306_125b 312 chr2L 9304454 9304507 chr2L 9304583 9304636 16 129 5.0 12.0 8.5 1.7 182 chr2L 9304454 3` UTR CR42844 - chr2L 9304545 3` UTR CR42844 - chr2L 9304636 3` UTR CR42844 - chr2L_16_9300001 chr2L_9300001 RAL-306_125b 313 chr2L 9317376 9317419 chr2L 9317543 9317811 14 216 9.5 0.0 4.8 2.4 435 chr2L 9317376 intergenic not near genes chr2L 9317594 intergenic not near genes chr2L 9317811 intergenic not near genes chr2L_14_9315001 chr2L_9315001 RAL-306_125b 314 chr2L 9317545 9317559 chr2L 9317872 9317886 6 327 0.0 20.0 10.0 0.5 341 chr2L 9317545 intergenic not near genes chr2L 9317716 intergenic not near genes chr2L 9317886 intergenic not near genes chr2L_6_9315001 chr2L_9315001 RAL-306_125b 315 chr2L 9321683 9321751 chr2L 9321809 9321830 27 123 11.0 12.0 11.5 2.2 147 chr2L 9321683 intergenic not near genes chr2L 9321756 intergenic not near genes chr2L 9321830 intergenic not near genes chr2L_27_9320001 chr2L_9320001 RAL-306_125b 316 chr2L 9337860 9337930 chr2L 9337987 9338057 9 125 4.0 4.5 4.2 1.7 197 chr2L 9337860 intron Eaat1 + chr2L 9337958 intron Eaat1 + chr2L 9338057 5` UTR Eaat1 + chr2L_9_9335001 chr2L_9335001 RAL-306_125b 317 chr2L 9346721 9346773 chr2L 9346860 9346911 13 136 4.5 0.0 2.2 4.1 190 chr2L 9346721 intergenic not near genes chr2L 9346816 intergenic not near genes chr2L 9346911 intergenic not near genes chr2L_13_9345001 chr2L_9345001 RAL-306_125b 318 chr2L 9380193 9380254 chr2L 9380338 9380400 9 145 6.5 6.0 6.2 1.2 207 chr2L 9380193 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380400 intron Shawl - chr2L_9_9380001 chr2L_9380001 RAL-306_125b 319 chr2L 9387202 9387277 chr2L 9387350 9387425 22 147 6.5 2.5 4.5 4.0 223 chr2L 9387202 intron Shawl - chr2L 9387314 intron Shawl - chr2L 9387425 intron,5` UTR Shawl -,Aldh + chr2L_22_9385001 chr2L_9385001 RAL-306_125b 320 chr2L 9393459 9393531 chr2L 9396476 9396547 jockey 19 3015 3.0 9.5 6.2 2.6 3088 chr2L 9393459 intron Shawl - chr2L 9395003 intron Shawl - chr2L 9396547 intron Shawl - chr2L_19_9395001 chr2L_9395001 RAL-306_125b 321 chr2L 9407864 9407905 chr2L 9407996 9408037 15 130 4.5 9.5 7.0 1.9 173 chr2L 9407864 intron Shawl - chr2L 9407950 intron Shawl - chr2L 9408037 intron Shawl - chr2L_15_9405001 chr2L_9405001 RAL-306_125b 322 chr2L 9443051 9443085 chr2L 9443175 9443249 8 150 3.0 2.5 2.8 2.1 198 chr2L 9443051 intron numb + chr2L 9443150 intron numb + chr2L 9443249 intron numb + chr2L_8_9440001 chr2L_9440001 RAL-306_125b 323 chr2L 9451001 9451064 chr2L 9451153 9451208 22 151 3.5 9.5 6.5 2.9 207 chr2L 9451001 intron numb + chr2L 9451104 intron numb + chr2L 9451208 intron numb + chr2L_22_9450001 chr2L_9450001 RAL-306_125b 324 chr2L 9454931 9455001 chr2L 9455083 9455153 17 149 10.0 5.5 7.8 1.9 222 chr2L 9454931 intron numb + chr2L 9455042 intron numb + chr2L 9455153 intron numb + chr2L_17_9455001 chr2L_9455001 RAL-306_125b 325 chr2L 9488535 9488575 chr2L 9488666 9488668 6 124 13.5 10.0 11.8 0.5 133 chr2L 9488535 intergenic not near genes chr2L 9488602 intergenic not near genes chr2L 9488668 intergenic not near genes chr2L_6_9485001 chr2L_9485001 RAL-306_125b 326 chr2L 9490473 9490534 chr2L 9490603 9490664 23 129 12.5 7.0 9.8 2.1 191 chr2L 9490473 intergenic not near genes chr2L 9490568 intergenic not near genes chr2L 9490664 intergenic not near genes chr2L_23_9490001 chr2L_9490001 RAL-306_125b 327 chr2L 9499819 9499838 chr2L 9499947 9499966 10 127 9.5 6.0 7.8 1.1 147 chr2L 9499819 intron CG33298 + chr2L 9499892 intron CG33298 + chr2L 9499966 intron CG33298 + chr2L_10_9495001 chr2L_9495001 RAL-306_125b 328 chr2L 9506329 9506368 chr2L 9506461 9506500 11 132 4.5 5.5 5.0 1.8 171 chr2L 9506329 intron CG33298 + chr2L 9506414 intron CG33298 + chr2L 9506500 intron CG33298 + chr2L_11_9505001 chr2L_9505001 RAL-306_125b 329 chr2L 9532003 9532058 chr2L 9532138 9532193 12 132 6.0 6.0 6.0 1.7 190 chr2L 9532003 intron Oatp30B + chr2L 9532098 intron Oatp30B + chr2L 9532193 intron Oatp30B + chr2L_12_9530001 chr2L_9530001 RAL-306_125b 330 chr2L 9618846 9618915 chr2L 9618973 9619042 29 122 5.0 5.0 5.0 4.8 196 chr2L 9618846 intron GlcAT-S + chr2L 9618944 intron GlcAT-S + chr2L 9619042 intron GlcAT-S + chr2L_29_9615001 chr2L_9615001 RAL-306_125b 331 chr2L 9712658 9712725 chr2L 9712804 9712871 37 144 8.0 9.0 8.5 3.9 213 chr2L 9712658 3` UTR Nckx30C - chr2L 9712764 3` UTR Nckx30C - chr2L 9712871 3` UTR Nckx30C - chr2L_37_9710001 chr2L_9710001 RAL-306_125b 332 chr2L 9719735 9719778 chr2L 9719868 9719912 14 133 0.0 3.0 1.5 5.6 177 chr2L 9719735 intron Nckx30C - chr2L 9719824 intron Nckx30C - chr2L 9719912 intron Nckx30C - chr2L_14_9715001 chr2L_9715001 RAL-306_125b 333 chr2L 9770727 9770758 chr2L 9770882 9770913 11 154 6.0 6.0 6.0 1.6 186 chr2L 9770727 intron ppk18 - chr2L 9770820 intron ppk18 - chr2L 9770913 exon ppk18 - chr2L_11_9770001 chr2L_9770001 RAL-306_125b 334 chr2L 9821560 9821599 chr2L 9822039 9822078 11 479 4.5 16.0 10.2 1.0 518 chr2L 9821560 intron nAChRalpha6 - chr2L 9821819 intron nAChRalpha6 - chr2L 9822078 intron nAChRalpha6 - chr2L_11_9820001 chr2L_9820001 RAL-306_125b 335 chr2L 9837382 9837446 chr2L 9837510 9837574 36 127 0.5 0.5 0.5 24.0 192 chr2L 9837382 intron nAChRalpha6 - chr2L 9837478 intron nAChRalpha6 - chr2L 9837574 intron nAChRalpha6 - chr2L_36_9835001 chr2L_9835001 RAL-306_125b 336 chr2L 9861575 9861643 chr2L 9861812 9861860 19 231 9.0 6.0 7.5 2.2 285 chr2L 9861575 intron nAChRalpha6 - chr2L 9861718 intron nAChRalpha6 - chr2L 9861860 intron nAChRalpha6 - chr2L_19_9860001 chr2L_9860001 RAL-306_125b 337 chr2L 9871476 9871532 chr2L 9871610 9871666 15 134 7.0 4.5 5.8 2.2 190 chr2L 9871476 intron nAChRalpha6 - chr2L 9871571 intron nAChRalpha6 - chr2L 9871666 intron nAChRalpha6 - chr2L_15_9870001 chr2L_9870001 RAL-306_125b 338 chr2L 9973684 9973700 chr2L 9980850 9980869 HMS-Beagle 9 7167 16.5 7.0 11.8 0.7 7185 chr2L 9973684 intergenic not near genes chr2L 9977276 intergenic not near genes chr2L 9980869 intergenic not near genes chr2L_9_9975001 chr2L_9975001 RAL-306_125b 339 chr2L 9973711 9973732 chr2L 9980844 9980896 HMS-Beagle 8 7161 13.5 6.0 9.8 0.7 7185 chr2L 9973711 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980896 intergenic not near genes chr2L_8_9975001 chr2L_9975001 RAL-306_125b 340 chr2L 10051723 10051753 chr2L 10051829 10051852 6 113 4.5 12.5 8.5 0.6 129 chr2L 10051723 5` UTR CR44874 + chr2L 10051788 5` UTR CR44874 + chr2L 10051852 5` UTR CR44874 + chr2L_6_10050001 chr2L_10050001 RAL-306_125b 341 chr2L 10087447 10087478 chr2L 10087558 10087586 10 123 8.0 5.5 6.8 1.3 139 chr2L 10087447 intron CG44153 - chr2L 10087516 intron CG44153 - chr2L 10087586 intron CG44153 - chr2L_10_10085001 chr2L_10085001 RAL-306_125b 342 chr2L 10094244 10094313 chr2L 10094469 10094538 18 220 8.5 4.0 6.2 2.5 294 chr2L 10094244 intron CG44153 - chr2L 10094391 intron CG44153 - chr2L 10094538 intron CG44153 - chr2L_18_10090001 chr2L_10090001 RAL-306_125b 343 chr2L 10095587 10095657 chr2L 10095717 10095786 20 130 9.5 6.0 7.8 2.3 199 chr2L 10095587 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095786 intron CG44153 - chr2L_20_10095001 chr2L_10095001 RAL-306_125b 344 chr2L 10105276 10105310 chr2L 10105392 10105426 8 123 3.0 0.0 1.5 3.2 150 chr2L 10105276 intron,intron CG44153 -,CG34109 + chr2L 10105351 intron,intron CG44153 -,CG34109 + chr2L 10105426 intron,intron CG44153 -,CG34109 + chr2L_8_10105001 chr2L_10105001 RAL-306_125b 345 chr2L 10108937 10109001 chr2L 10109069 10109133 17 129 8.5 7.5 8.0 1.9 196 chr2L 10108937 intron,intron CG44153 -,CG34109 + chr2L 10109035 intron,intron CG44153 -,CG34109 + chr2L 10109133 intron,intron CG44153 -,CG34109 + chr2L_17_10105001 chr2L_10105001 RAL-306_125b 346 chr2L 10138142 10138193 chr2L 10143438 10143489 Rt1c 7 5296 6.0 7.5 6.8 0.9 5347 chr2L 10138142 intron CG44153 - chr2L 10140816 intron CG44153 - chr2L 10143489 intron CG44153 - chr2L_7_10140001 chr2L_10140001 RAL-306_125b 347 chr2L 10153167 10153236 chr2L 10153279 10153310 11 116 2.5 3.0 2.8 2.9 143 chr2L 10153167 intron,exon CG44153 -,CG4839 + chr2L 10153238 intron,intron CG44153 -,CG4839 + chr2L 10153310 intron,intron CG44153 -,CG4839 + chr2L_11_10150001 chr2L_10150001 RAL-306_125b 348 chr2L 10156279 10156352 chr2L 10163799 10163841 blood 29 7517 11.0 8.5 9.8 2.7 7562 chr2L 10156279 intron,3` UTR CG44153 -,CG4839 + chr2L 10160060 intron CG44153 - chr2L 10163841 intron CG44153 - chr2L_29_10160001 chr2L_10160001 RAL-306_125b 349 chr2L 10177358 10177393 chr2L 10177488 10177523 14 130 7.0 3.5 5.2 2.3 165 chr2L 10177358 intron CG44153 - chr2L 10177440 intron CG44153 - chr2L 10177523 intron CG44153 - chr2L_14_10175001 chr2L_10175001 RAL-306_125b 350 chr2L 10209800 10209823 chr2L 10209927 10209950 4 127 10.5 2.5 6.5 0.5 150 chr2L 10209800 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209875 3` UTR CG5727 - chr2L 10209950 3` UTR CG5727 - chr2L_4_10205001 chr2L_10205001 RAL-306_125b 351 chr2L 10227480 10227504 chr2L 10227606 10227630 4 126 14.5 9.5 12.0 0.3 150 chr2L 10227480 intergenic CG5694 - chr2L 10227555 intergenic CG5694 - chr2L 10227630 intergenic CG5694 - chr2L_4_10225001 chr2L_10225001 RAL-306_125b 352 chr2L 10227508 10227551 chr2L 10227603 10227677 7 113 8.5 9.5 9.0 0.7 169 chr2L 10227508 intergenic CG5694 - chr2L 10227592 intergenic CG5694 - chr2L 10227677 intergenic CG5694 - chr2L_7_10225001 chr2L_10225001 RAL-306_125b 353 chr2L 10281639 10281687 chr2L 10281784 10281843 12 149 2.0 10.5 6.2 1.7 204 chr2L 10281639 intergenic CG5604 - chr2L 10281741 intergenic CG5604 - chr2L 10281843 intergenic CG5604 - chr2L_12_10280001 chr2L_10280001 RAL-306_125b 354 chr2L 10294115 10294190 chr2L 10294242 10294320 12 126 3.0 3.5 3.2 2.9 205 chr2L 10294115 intron Hand - chr2L 10294218 intron Hand - chr2L 10294320 intron Hand - chr2L_12_10290001 chr2L_10290001 RAL-306_125b 355 chr2L 10421259 10421273 chr2L 10421387 10421412 4 133 5.5 9.0 7.2 0.5 153 chr2L 10421259 exon pie - chr2L 10421336 exon pie - chr2L 10421412 exon pie - chr2L_4_10420001 chr2L_10420001 RAL-306_125b 356 chr2L 10447028 10447092 chr2L 10447188 10447251 7 160 3.0 10.5 6.8 0.9 223 chr2L 10447028 intron loh + chr2L 10447140 intron loh + chr2L 10447251 intron loh + chr2L_7_10445001 chr2L_10445001 RAL-306_125b 357 chr2L 10458178 10458210 chr2L 10458324 10458356 13 146 0.0 5.5 2.8 3.4 178 chr2L 10458178 intron LM408 + chr2L 10458267 intron LM408 + chr2L 10458356 intron LM408 + chr2L_13_10455001 chr2L_10455001 RAL-306_125b 358 chr2L 10474338 10474366 chr2L 10474469 10474487 7 130 11.0 5.0 8.0 0.8 149 chr2L 10474338 5` UTR RluA-1 - chr2L 10474412 intergenic RluA-1 - chr2L 10474487 intergenic RluA-1 - chr2L_7_10470001 chr2L_10470001 RAL-306_125b 359 chr2L 10474381 10474408 chr2L 10474467 10474539 9 119 4.0 5.0 4.5 1.6 158 chr2L 10474381 intergenic RluA-1 - chr2L 10474460 intergenic RluA-1 - chr2L 10474539 intergenic RluA-1 - chr2L_9_10470001 chr2L_10470001 RAL-306_125b 360 chr2L 10495260 10495465 chr2L 10495387 10495601 28 134 1.5 5.0 3.2 6.7 341 chr2L 10495260 intron Myo31DF - chr2L 10495430 intron Myo31DF - chr2L 10495601 intron Myo31DF - chr2L_28_10495001 chr2L_10495001 RAL-306_125b 361 chr2L 10515324 10515389 chr2L 10515467 10515532 19 143 6.0 7.5 6.8 2.4 208 chr2L 10515324 intron,intron CG45083 -,Fatp - chr2L 10515428 intron,intron CG45083 -,Fatp - chr2L 10515532 intron,intron CG45083 -,Fatp - chr2L_19_10515001 chr2L_10515001 RAL-306_125b 362 chr2L 10519460 10519504 chr2L 10519773 10519775 4 296 0.0 7.5 3.8 0.8 315 chr2L 10519460 intergenic Lrr47 + chr2L 10519618 intergenic Lrr47 + chr2L 10519775 intergenic not near genes chr2L_4_10515001 chr2L_10515001 RAL-306_125b 363 chr2L 10521065 10521090 chr2L 10521163 10521211 6 120 12.5 8.0 10.2 0.5 146 chr2L 10521065 intergenic not near genes chr2L 10521138 intergenic not near genes chr2L 10521211 intergenic not near genes chr2L_6_10520001 chr2L_10520001 RAL-306_125b 364 chr2L 10531563 10531626 chr2L 10531705 10531766 16 140 0.0 5.0 2.5 4.6 203 chr2L 10531563 3` UTR Lip4 + chr2L 10531664 3` UTR Lip4 + chr2L 10531766 3` UTR Lip4 + chr2L_16_10530001 chr2L_10530001 RAL-306_125b 365 chr2L 10540827 10540875 chr2L 10540955 10541003 9 128 5.5 0.5 3.0 2.2 176 chr2L 10540827 intergenic not near genes chr2L 10540915 intergenic not near genes chr2L 10541003 intergenic not near genes chr2L_9_10540001 chr2L_10540001 RAL-306_125b 366 chr2L 10574523 10574590 chr2L 10574670 10574737 26 147 14.0 10.0 12.0 2.0 214 chr2L 10574523 intron Trim9 + chr2L 10574630 intron Trim9 + chr2L 10574737 intron Trim9 + chr2L_26_10570001 chr2L_10570001 RAL-306_125b 367 chr2L 10592823 10592868 chr2L 10600505 10600579 opus 17 7709 8.5 7.0 7.8 1.9 7756 chr2L 10592823 intron Trim9 + chr2L 10596701 intron Trim9 + chr2L 10600579 intron Trim9 + chr2L_17_10595001 chr2L_10595001 RAL-306_125b 368 chr2L 10604174 10604218 chr2L 10604306 10604350 20 132 6.5 7.0 6.8 2.6 176 chr2L 10604174 intron Trim9 + chr2L 10604262 intron Trim9 + chr2L 10604350 intron Trim9 + chr2L_20_10600001 chr2L_10600001 RAL-306_125b 369 chr2L 10631162 10631240 chr2L 10631344 10631428 11 184 8.5 0.0 4.2 2.1 266 chr2L 10631162 intron CG7329 - chr2L 10631295 intron CG7329 - chr2L 10631428 intron CG7329 - chr2L_11_10630001 chr2L_10630001 RAL-306_125b 370 chr2L 10688524 10688564 chr2L 10688650 10688690 10 126 0.0 8.0 4.0 2.0 166 chr2L 10688524 intergenic CG7294 - chr2L 10688607 intergenic CG7294 - chr2L 10688690 intergenic CG7294 - chr2L_10_10685001 chr2L_10685001 RAL-306_125b 371 chr2L 10698090 10698160 chr2L 10698223 10698273 27 130 6.5 11.0 8.8 2.8 183 chr2L 10698090 5` UTR CR44181 + chr2L 10698182 5` UTR CR44181 + chr2L 10698273 intergenic CR44181 +,CG7300 - chr2L_27_10695001 chr2L_10695001 RAL-306_125b 372 chr2L 10698523 10698543 chr2L 10698656 10698676 12 133 9.0 3.5 6.2 1.7 153 chr2L 10698523 intergenic CR44181 +,CG7300 - chr2L 10698600 intergenic CR44181 + chr2L 10698676 intergenic CR44181 + chr2L_12_10695001 chr2L_10695001 RAL-306_125b 373 chr2L 10704869 10704945 chr2L 10705014 10705090 13 144 4.5 3.5 4.0 2.6 221 chr2L 10704869 intron,exon Lip2 -,CG6415 + chr2L 10704980 intron Lip2 - chr2L 10705090 exon Lip2 - chr2L_13_10700001 chr2L_10700001 RAL-306_125b 374 chr2L 10705407 10705475 chr2L 10705536 10705608 12 122 2.0 2.0 2.0 4.0 201 chr2L 10705407 exon Lip2 - chr2L 10705508 intron Lip2 - chr2L 10705608 intron Lip2 - chr2L_12_10705001 chr2L_10705001 RAL-306_125b 375 chr2L 10723487 10723553 chr2L 10723631 10723697 17 144 3.5 6.0 4.8 2.9 210 chr2L 10723487 intergenic not near genes chr2L 10723592 intergenic not near genes chr2L 10723697 intergenic not near genes chr2L_17_10720001 chr2L_10720001 RAL-306_125b 376 chr2L 10787933 10788025 chr2L 10788076 10788145 10 141 3.5 9.5 6.5 1.3 212 chr2L 10787933 intron CG31869 - chr2L 10788039 intron CG31869 - chr2L 10788145 intron CG31869 - chr2L_10_10785001 chr2L_10785001 RAL-306_125b 377 chr2L 10836710 10836780 chr2L 10836839 10836908 20 128 2.5 7.0 4.8 3.4 198 chr2L 10836710 intron Nos - chr2L 10836809 intron Nos - chr2L 10836908 intron Nos - chr2L_20_10835001 chr2L_10835001 RAL-306_125b 378 chr2L 10862796 10862868 chr2L 10864461 10864532 Rt1c 10 1652 2.0 6.0 4.0 2.0 1736 chr2L 10862796 intron CR43807 - chr2L 10863664 intron CR43807 - chr2L 10864532 3` UTR CR43807 - chr2L_10_10860001 chr2L_10860001 RAL-306_125b 379 chr2L 10873391 10873404 chr2L 10873611 10873624 8 220 5.5 5.0 5.2 1.3 233 chr2L 10873391 intergenic not near genes chr2L 10873508 intergenic not near genes chr2L 10873624 intergenic not near genes chr2L_8_10870001 chr2L_10870001 RAL-306_125b 380 chr2L 10946914 10946963 chr2L 10956179 10956228 roo 12 9262 8.0 7.5 7.8 1.4 9314 chr2L 10946914 intron dpr2 - chr2L 10951571 intron dpr2 - chr2L 10956228 intron dpr2 - chr2L_12_10950001 chr2L_10950001 RAL-306_125b 381 chr2L 11012265 11012316 chr2L 11012403 11012423 16 133 9.5 14.0 11.8 1.2 158 chr2L 11012265 intergenic dUTPase + chr2L 11012344 intergenic dUTPase + chr2L 11012423 intergenic dUTPase + chr2L_16_11010001 chr2L_11010001 RAL-306_125b 382 chr2L 11055014 11055077 chr2L 11055149 11055212 20 135 5.0 6.0 5.5 3.1 198 chr2L 11055014 intron Samuel - chr2L 11055113 intron Samuel - chr2L 11055212 intron Samuel - chr2L_20_11055001 chr2L_11055001 RAL-306_125b 383 chr2L 11056173 11056241 chr2L 11056337 11056404 24 162 6.5 6.0 6.2 3.3 231 chr2L 11056173 intron Samuel - chr2L 11056288 intron Samuel - chr2L 11056404 intron Samuel - chr2L_24_11055001 chr2L_11055001 RAL-306_125b 384 chr2L 11169425 11169500 chr2L 11169610 11169685 25 185 6.0 8.5 7.2 3.0 260 chr2L 11169425 intron Ca-beta - chr2L 11169555 intron Ca-beta - chr2L 11169685 intron Ca-beta - chr2L_25_11165001 chr2L_11165001 RAL-306_125b 385 chr2L 11183751 11183811 chr2L 11183897 11183957 20 144 7.5 7.5 7.5 2.4 206 chr2L 11183751 intron Ca-beta - chr2L 11183854 intron Ca-beta - chr2L 11183957 intron Ca-beta - chr2L_20_11180001 chr2L_11180001 RAL-306_125b 386 chr2L 11191434 11191450 chr2L 11191560 11191576 4 126 4.0 3.0 3.5 0.9 142 chr2L 11191434 intron Ca-beta - chr2L 11191505 intron Ca-beta - chr2L 11191576 intron Ca-beta - chr2L_4_11190001 chr2L_11190001 RAL-306_125b 387 chr2L 11292337 11292408 chr2L 11292468 11292535 18 131 5.0 4.5 4.8 3.1 198 chr2L 11292337 intergenic not near genes chr2L 11292436 intergenic not near genes chr2L 11292535 intergenic not near genes chr2L_18_11290001 chr2L_11290001 RAL-306_125b 388 chr2L 11315246 11315265 chr2L 11317672 11317718 G2 9 2451 3.5 6.5 5.0 1.5 2472 chr2L 11315246 intergenic not near genes chr2L 11316482 intergenic not near genes chr2L 11317718 intergenic not near genes chr2L_9_11315001 chr2L_11315001 RAL-306_125b 389 chr2L 11339695 11339708 chr2L 11339822 11339835 5 125 9.0 6.5 7.8 0.6 140 chr2L 11339695 intergenic not near genes chr2L 11339765 intergenic not near genes chr2L 11339835 intergenic not near genes chr2L_5_11335001 chr2L_11335001 RAL-306_125b 390 chr2L 11339710 11339940 chr2L 11339815 11340055 30 120 6.5 6.5 6.5 4.0 345 chr2L 11339710 intergenic not near genes chr2L 11339882 intergenic not near genes chr2L 11340055 intergenic not near genes chr2L_30_11335001 chr2L_11335001 RAL-306_125b 391 chr2L 11363071 11363106 chr2L 11363208 11363239 5 132 7.0 8.5 7.8 0.6 168 chr2L 11363071 intron salr + chr2L 11363155 intron salr + chr2L 11363239 intron salr + chr2L_5_11360001 chr2L_11360001 RAL-306_125b 392 chr2L 11379904 11379952 chr2L 11380036 11380084 8 132 9.0 0.0 4.5 1.5 180 chr2L 11379904 intergenic not near genes chr2L 11379994 intergenic not near genes chr2L 11380084 intergenic not near genes chr2L_8_11375001 chr2L_11375001 RAL-306_125b 393 chr2L 11380586 11380637 chr2L 11380706 11380764 10 120 4.5 9.0 6.8 1.3 178 chr2L 11380586 intergenic not near genes chr2L 11380675 intergenic not near genes chr2L 11380764 intergenic not near genes chr2L_10_11380001 chr2L_11380001 RAL-306_125b 394 chr2L 11399472 11399523 chr2L 11399602 11399649 6 129 4.5 0.0 2.2 1.9 177 chr2L 11399472 intergenic not near genes chr2L 11399560 intergenic not near genes chr2L 11399649 intergenic not near genes chr2L_6_11395001 chr2L_11395001 RAL-306_125b 395 chr2L 11455534 11455569 chr2L 11455657 11455704 8 131 6.5 6.5 6.5 1.1 170 chr2L 11455534 intergenic not near genes chr2L 11455619 intergenic not near genes chr2L 11455704 intergenic not near genes chr2L_8_11455001 chr2L_11455001 RAL-306_125b 396 chr2L 11455570 11455590 chr2L 11455652 11455725 5 124 4.5 6.5 5.5 0.8 155 chr2L 11455570 intergenic not near genes chr2L 11455648 intergenic not near genes chr2L 11455725 intergenic not near genes chr2L_5_11455001 chr2L_11455001 RAL-306_125b 397 chr2L 11496592 11496640 chr2L 11496720 11496768 15 128 6.5 6.5 6.5 2.0 176 chr2L 11496592 intergenic CG6488 - chr2L 11496680 intergenic CG6488 - chr2L 11496768 intergenic CG6488 - chr2L_15_11495001 chr2L_11495001 RAL-306_125b 398 chr2L 11496642 11496650 chr2L 11496714 11496778 7 120 5.5 5.5 5.5 1.1 136 chr2L 11496642 intergenic CG6488 - chr2L 11496710 intergenic CG6488 - chr2L 11496778 intergenic CG6488 - chr2L_7_11495001 chr2L_11495001 RAL-306_125b 399 chr2L 11537074 11537095 chr2L 11537388 11537394 7 312 14.0 4.0 9.0 0.7 320 chr2L 11537074 intergenic CG43438 + chr2L 11537234 intergenic CG43438 + chr2L 11537394 intergenic not near genes chr2L_7_11535001 chr2L_11535001 RAL-306_125b 400 chr2L 11537097 11537137 chr2L 11537387 11537415 16 301 8.0 4.0 6.0 2.3 318 chr2L 11537097 intergenic CG43438 + chr2L 11537256 intergenic CG43438 + chr2L 11537415 intergenic not near genes chr2L_16_11535001 chr2L_11535001 RAL-306_125b 401 chr2L 11540537 11540601 chr2L 11547989 11548053 Tabor 17 7451 8.5 7.0 7.8 1.9 7516 chr2L 11540537 intergenic not near genes chr2L 11544295 intergenic not near genes chr2L 11548053 intergenic not near genes chr2L_17_11540001 chr2L_11540001 RAL-306_125b 402 chr2L 11563600 11563662 chr2L 11568854 11568916 copia 14 5252 7.0 7.0 7.0 1.8 5316 chr2L 11563600 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568916 intergenic not near genes chr2L_14_11565001 chr2L_11565001 RAL-306_125b 403 chr2L 11584623 11584633 chr2L 11584753 11584763 6 130 15.0 6.0 10.5 0.5 140 chr2L 11584623 intron kek2 + chr2L 11584693 intron kek2 + chr2L 11584763 intron kek2 + chr2L_6_11580001 chr2L_11580001 RAL-306_125b 404 chr2L 11584634 11584657 chr2L 11584752 11584787 6 126 12.5 5.0 8.8 0.6 153 chr2L 11584634 intron kek2 + chr2L 11584710 intron kek2 + chr2L 11584787 intron kek2 + chr2L_6_11580001 chr2L_11580001 RAL-306_125b 405 chr2L 11596811 11596846 chr2L 11596941 11596976 9 130 8.0 14.5 11.2 0.7 165 chr2L 11596811 intron kek2 + chr2L 11596894 intron kek2 + chr2L 11596976 intron kek2 + chr2L_9_11595001 chr2L_11595001 RAL-306_125b 406 chr2L 11610503 11610559 chr2L 11610622 11610687 11 125 7.0 5.5 6.2 1.5 184 chr2L 11610503 intron kek2 + chr2L 11610595 intron,3` UTR kek2 +,spag4 - chr2L 11610687 intron,exon kek2 +,spag4 - chr2L_11_11610001 chr2L_11610001 RAL-306_125b 407 chr2L 11610563 11610574 chr2L 11610621 11610702 5 114 6.5 5.5 6.0 0.7 139 chr2L 11610563 intron,3` UTR kek2 +,spag4 - chr2L 11610632 intron,3` UTR kek2 +,spag4 - chr2L 11610702 intron,intron kek2 +,spag4 - chr2L_5_11610001 chr2L_11610001 RAL-306_125b 408 chr2L 11614031 11614079 chr2L 11615556 11615592 hopper2 13 1524 4.0 7.5 5.8 1.9 1561 chr2L 11614031 intron kek2 + chr2L 11614812 intron kek2 + chr2L 11615592 intron kek2 + chr2L_13_11610001 chr2L_11610001 RAL-306_125b 409 chr2L 11657950 11657997 chr2L 11658079 11658132 15 127 0.0 6.0 3.0 3.8 182 chr2L 11657950 3` UTR CG43167 + chr2L 11658041 intergenic CG43167 + chr2L 11658132 intergenic CG43167 + chr2L_15_11655001 chr2L_11655001 RAL-306_125b 410 chr2L 11672100 11672160 chr2L 11672257 11672317 30 155 7.0 5.5 6.2 4.2 217 chr2L 11672100 intergenic not near genes chr2L 11672208 intergenic not near genes chr2L 11672317 intergenic not near genes chr2L_30_11670001 chr2L_11670001 RAL-306_125b 411 chr2L 11676287 11676346 chr2L 11676416 11676483 5 131 0.0 0.0 0.0 5.0 196 chr2L 11676287 intergenic not near genes chr2L 11676385 intergenic not near genes chr2L 11676483 intergenic not near genes chr2L_5_11675001 chr2L_11675001 RAL-306_125b 412 chr2L 11713470 11713535 chr2L 11720983 11721023 blood 20 7515 4.0 6.5 5.2 3.2 7553 chr2L 11713470 intergenic not near genes chr2L 11717246 intergenic not near genes chr2L 11721023 intergenic CR44143 + chr2L_20_11715001 chr2L_11715001 RAL-306_125b 413 chr2L 11723056 11723120 chr2L 11723177 11723250 20 126 5.0 7.0 6.0 2.9 194 chr2L 11723056 intergenic not near genes chr2L 11723153 intergenic not near genes chr2L 11723250 intergenic not near genes chr2L_20_11720001 chr2L_11720001 RAL-306_125b 414 chr2L 11770555 11770574 chr2L 11770692 11770705 4 136 20.5 10.0 15.2 0.2 150 chr2L 11770555 intergenic not near genes chr2L 11770630 intergenic not near genes chr2L 11770705 intergenic not near genes chr2L_4_11770001 chr2L_11770001 RAL-306_125b 415 chr2L 11770579 11770627 chr2L 11770686 11770764 15 130 8.5 8.5 8.5 1.6 185 chr2L 11770579 intergenic not near genes chr2L 11770672 intergenic not near genes chr2L 11770764 intergenic not near genes chr2L_15_11770001 chr2L_11770001 RAL-306_125b 416 chr2L 11781000 11781181 chr2L 11781126 11781307 16 131 1.0 0.0 0.5 10.7 307 chr2L 11781000 intergenic not near genes chr2L 11781154 intergenic not near genes chr2L 11781307 intergenic not near genes chr2L_16_11780001 chr2L_11780001 RAL-306_125b 417 chr2L 11820388 11820461 chr2L 11820523 11820592 13 132 1.0 11.5 6.2 1.8 204 chr2L 11820388 intron Pde1c - chr2L 11820490 intron Pde1c - chr2L 11820592 intron Pde1c - chr2L_13_11820001 chr2L_11820001 RAL-306_125b 418 chr2L 11825656 11825667 chr2L 11825785 11825794 4 127 18.5 0.0 9.2 0.4 138 chr2L 11825656 intron Pde1c - chr2L 11825725 intron Pde1c - chr2L 11825794 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-306_125b 419 chr2L 11951919 11951989 chr2L 11952057 11952082 33 136 10.0 7.5 8.8 3.4 163 chr2L 11951919 intergenic CR43314 - chr2L 11952000 intergenic CR43314 - chr2L 11952082 intergenic CR43314 - chr2L_33_11950001 chr2L_11950001 RAL-306_125b 420 chr2L 12026754 12026776 chr2L 12026985 12027007 8 231 3.5 0.0 1.8 2.9 253 chr2L 12026754 intergenic not near genes chr2L 12026880 intergenic not near genes chr2L 12027007 intergenic dmGlut + chr2L_8_12025001 chr2L_12025001 RAL-306_125b 421 chr2L 12031346 12031416 chr2L 12031477 12031502 23 128 8.0 0.0 4.0 4.6 156 chr2L 12031346 intron dmGlut + chr2L 12031424 intron dmGlut + chr2L 12031502 intron dmGlut + chr2L_23_12030001 chr2L_12030001 RAL-306_125b 422 chr2L 12049685 12049764 chr2L 12049850 12049929 26 160 7.5 6.5 7.0 3.2 244 chr2L 12049685 5` UTR CG14945 + chr2L 12049807 5` UTR CG14945 + chr2L 12049929 5` UTR CG14945 + chr2L_26_12045001 chr2L_12045001 RAL-306_125b 423 chr2L 12067291 12067346 chr2L 12074393 12074448 297 18 7101 11.0 7.0 9.0 1.8 7157 chr2L 12067291 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074448 intergenic not near genes chr2L_18_12070001 chr2L_12070001 RAL-306_125b 424 chr2L 12131418 12131495 chr2L 12131564 12131641 28 146 8.0 5.0 6.5 3.7 223 chr2L 12131418 exon rho-6 - chr2L 12131530 intron rho-6 - chr2L 12131641 intron rho-6 - chr2L_28_12130001 chr2L_12130001 RAL-306_125b 425 chr2L 12132688 12132748 chr2L 12132824 12132869 20 135 0.0 9.5 4.8 3.4 181 chr2L 12132688 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132869 intron rho-6 - chr2L_20_12130001 chr2L_12130001 RAL-306_125b 426 chr2L 12157561 12157576 chr2L 12157690 12157705 4 128 20.0 8.0 14.0 0.3 144 chr2L 12157561 intron CG31760 + chr2L 12157633 intron CG31760 + chr2L 12157705 intron CG31760 + chr2L_4_12155001 chr2L_12155001 RAL-306_125b 427 chr2L 12157582 12157634 chr2L 12157688 12157713 16 121 9.0 8.5 8.8 1.6 131 chr2L 12157582 intron CG31760 + chr2L 12157648 intron CG31760 + chr2L 12157713 intron CG31760 + chr2L_16_12155001 chr2L_12155001 RAL-306_125b 428 chr2L 12209996 12210003 chr2L 12210135 12210142 5 139 14.5 5.0 9.8 0.5 146 chr2L 12209996 intron,3` UTR aret +,CG31759 + chr2L 12210069 intron aret + chr2L 12210142 intron aret + chr2L_5_12210001 chr2L_12210001 RAL-306_125b 429 chr2L 12210004 12210044 chr2L 12210134 12210183 11 137 5.5 5.0 5.2 1.8 179 chr2L 12210004 intron,3` UTR aret +,CG31759 + chr2L 12210094 intron aret + chr2L 12210183 intron aret + chr2L_11_12210001 chr2L_12210001 RAL-306_125b 430 chr2L 12224886 12224892 chr2L 12225012 12225013 4 125 3.0 22.0 12.5 0.3 127 chr2L 12224886 intron aret + chr2L 12224950 intron aret + chr2L 12225013 intron aret + chr2L_4_12220001 chr2L_12220001 RAL-306_125b 431 chr2L 12224894 12224897 chr2L 12224970 12225011 6 107 3.0 16.5 9.8 0.6 117 chr2L 12224894 intron aret + chr2L 12224952 intron aret + chr2L 12225011 intron aret + chr2L_6_12220001 chr2L_12220001 RAL-306_125b 432 chr2L 12248090 12248116 chr2L 12248216 12248252 5 133 2.5 8.5 5.5 0.8 162 chr2L 12248090 intron aret + chr2L 12248171 intron aret + chr2L 12248252 intron aret + chr2L_5_12245001 chr2L_12245001 RAL-306_125b 433 chr2L 12253980 12254002 chr2L 12254122 12254144 9 142 21.0 0.0 10.5 0.8 164 chr2L 12253980 intron aret + chr2L 12254062 intron aret + chr2L 12254144 intron aret + chr2L_9_12250001 chr2L_12250001 RAL-306_125b 434 chr2L 12263896 12263912 chr2L 12264028 12264044 9 132 15.5 6.5 11.0 0.8 148 chr2L 12263896 intron aret + chr2L 12263970 intron aret + chr2L 12264044 intron aret + chr2L_9_12260001 chr2L_12260001 RAL-306_125b 435 chr2L 12263914 12263969 chr2L 12264021 12264095 11 123 5.5 6.5 6.0 1.6 181 chr2L 12263914 intron aret + chr2L 12264004 intron aret + chr2L 12264095 intron aret + chr2L_11_12260001 chr2L_12260001 RAL-306_125b 436 chr2L 12269361 12269401 chr2L 12269489 12269529 18 127 8.5 8.0 8.2 2.0 168 chr2L 12269361 intron aret + chr2L 12269445 intron aret + chr2L 12269529 intron aret + chr2L_18_12265001 chr2L_12265001 RAL-306_125b 437 chr2L 12272402 12272429 chr2L 12272539 12272557 10 135 12.5 7.5 10.0 0.9 155 chr2L 12272402 intron aret + chr2L 12272480 intron aret + chr2L 12272557 intron aret + chr2L_10_12270001 chr2L_12270001 RAL-306_125b 438 chr2L 12272430 12272463 chr2L 12272537 12272577 12 128 7.5 7.5 7.5 1.4 147 chr2L 12272430 intron aret + chr2L 12272504 intron aret + chr2L 12272577 intron aret + chr2L_12_12270001 chr2L_12270001 RAL-306_125b 439 chr2L 12275146 12275172 chr2L 12275283 12275309 8 135 8.0 4.5 6.2 1.1 163 chr2L 12275146 intron aret + chr2L 12275228 intron aret + chr2L 12275309 intron aret + chr2L_8_12275001 chr2L_12275001 RAL-306_125b 440 chr2L 12300314 12300380 chr2L 12300456 12300522 21 142 6.5 2.0 4.2 4.0 208 chr2L 12300314 intron aret + chr2L 12300418 intron aret + chr2L 12300522 intron aret + chr2L_21_12300001 chr2L_12300001 RAL-306_125b 441 chr2L 12422424 12422449 chr2L 12422558 12422583 9 134 15.0 11.5 13.2 0.6 159 chr2L 12422424 intron vir-1 - chr2L 12422504 intron vir-1 - chr2L 12422583 intron vir-1 - chr2L_9_12420001 chr2L_12420001 RAL-306_125b 442 chr2L 12422456 12422484 chr2L 12422548 12422618 17 128 5.0 10.0 7.5 2.0 162 chr2L 12422456 intron vir-1 - chr2L 12422537 intron vir-1 - chr2L 12422618 intron vir-1 - chr2L_17_12420001 chr2L_12420001 RAL-306_125b 443 chr2L 12471084 12471138 chr2L 12471210 12471264 11 126 3.5 9.5 6.5 1.5 180 chr2L 12471084 intron bun - chr2L 12471174 intron bun - chr2L 12471264 intron bun - chr2L_11_12470001 chr2L_12470001 RAL-306_125b 444 chr2L 12481338 12481399 chr2L 12481470 12481521 8 131 4.0 6.5 5.2 1.3 183 chr2L 12481338 intron bun - chr2L 12481430 intron bun - chr2L 12481521 intron bun - chr2L_8_12480001 chr2L_12480001 RAL-306_125b 445 chr2L 12496008 12496061 chr2L 12496418 12496471 14 409 11.0 8.5 9.8 1.3 463 chr2L 12496008 intron bun - chr2L 12496240 intron bun - chr2L 12496471 intron bun - chr2L_14_12495001 chr2L_12495001 RAL-306_125b 446 chr2L 12507233 12507297 chr2L 12507372 12507437 14 140 10.0 2.0 6.0 2.0 204 chr2L 12507233 intron bun - chr2L 12507335 intron bun - chr2L 12507437 intron bun - chr2L_14_12505001 chr2L_12505001 RAL-306_125b 447 chr2L 12529193 12529196 chr2L 12529395 12529398 5 201 10.0 6.5 8.2 0.5 205 chr2L 12529193 intron bun - chr2L 12529296 intron bun - chr2L 12529398 intron bun - chr2L_5_12525001 chr2L_12525001 RAL-306_125b 448 chr2L 12529197 12529254 chr2L 12529380 12529456 17 199 3.5 3.5 3.5 3.8 259 chr2L 12529197 intron bun - chr2L 12529326 intron bun - chr2L 12529456 intron bun - chr2L_17_12525001 chr2L_12525001 RAL-306_125b 449 chr2L 12547413 12547452 chr2L 12547547 12547586 19 133 4.0 1.0 2.5 5.4 173 chr2L 12547413 intergenic not near genes chr2L 12547500 intergenic not near genes chr2L 12547586 intergenic not near genes chr2L_19_12545001 chr2L_12545001 RAL-306_125b 450 chr2L 12558279 12558342 chr2L 12565447 12565521 HMS-Beagle 24 7176 7.5 6.5 7.0 3.0 7242 chr2L 12558279 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565521 intergenic not near genes chr2L_24_12560001 chr2L_12560001 RAL-306_125b 451 chr2L 12619865 12619903 chr2L 12619980 12620000 11 114 15.0 9.0 12.0 0.8 135 chr2L 12619865 intron,intron nub +,Ref2 - chr2L 12619932 intron,intron nub +,Ref2 - chr2L 12620000 intron,intron nub +,Ref2 - chr2L_11_12615001 chr2L_12615001 RAL-306_125b 452 chr2L 12653747 12653811 chr2L 12653914 12653978 7 167 8.0 9.0 8.5 0.7 231 chr2L 12653747 intergenic not near genes chr2L 12653862 intergenic not near genes chr2L 12653978 intergenic not near genes chr2L_7_12650001 chr2L_12650001 RAL-306_125b 453 chr2L 12682834 12682871 chr2L 12682963 12682999 9 128 12.5 7.5 10.0 0.8 165 chr2L 12682834 intron pdm2 + chr2L 12682916 intron pdm2 + chr2L 12682999 intron pdm2 + chr2L_9_12680001 chr2L_12680001 RAL-306_125b 454 chr2L 12682873 12682903 chr2L 12682957 12683032 14 120 8.5 5.5 7.0 1.8 159 chr2L 12682873 intron pdm2 + chr2L 12682952 intron pdm2 + chr2L 12683032 intron pdm2 + chr2L_14_12680001 chr2L_12680001 RAL-306_125b 455 chr2L 12728877 12728934 chr2L 12729167 12729223 pogo 9 290 12.5 6.5 9.5 0.9 346 chr2L 12728877 intron MRP + chr2L 12729050 intron MRP + chr2L 12729223 exon MRP + chr2L_9_12725001 chr2L_12725001 RAL-306_125b 456 chr2L 12731015 12731083 chr2L 12735828 12735900 F-element 29 4813 5.0 9.5 7.2 3.5 4885 chr2L 12731015 intron MRP + chr2L 12733458 intron MRP + chr2L 12735900 intron MRP + chr2L_29_12730001 chr2L_12730001 RAL-306_125b 457 chr2L 12739144 12739193 chr2L 12743965 12744024 Doc 13 4827 3.5 10.0 6.8 1.7 4880 chr2L 12739144 exon MRP + chr2L 12741584 intron MRP + chr2L 12744024 exon MRP + chr2L_13_12740001 chr2L_12740001 RAL-306_125b 458 chr2L 12751276 12751337 chr2L 12751399 12751470 22 127 7.5 3.0 5.2 3.5 194 chr2L 12751276 intergenic not near genes chr2L 12751373 intergenic not near genes chr2L 12751470 intergenic not near genes chr2L_22_12750001 chr2L_12750001 RAL-306_125b 459 chr2L 12760202 12760253 chr2L 12760343 12760401 23 146 7.5 5.5 6.5 3.1 199 chr2L 12760202 intergenic CG15483 - chr2L 12760302 intergenic CG15483 - chr2L 12760401 3` UTR CG15483 - chr2L_23_12760001 chr2L_12760001 RAL-306_125b 460 chr2L 12763780 12763872 chr2L 12764042 12764129 BS 16 261 0.5 0.0 0.2 13.3 349 chr2L 12763780 intergenic not near genes chr2L 12763954 intergenic not near genes chr2L 12764129 intergenic not near genes chr2L_16_12760001 chr2L_12760001 RAL-306_125b 461 chr2L 12766722 12766726 chr2L 12766850 12766854 5 128 15.5 7.5 11.5 0.4 132 chr2L 12766722 intergenic not near genes chr2L 12766788 intergenic not near genes chr2L 12766854 intergenic not near genes chr2L_5_12765001 chr2L_12765001 RAL-306_125b 462 chr2L 12766729 12766779 chr2L 12766842 12766906 12 126 8.0 6.0 7.0 1.5 177 chr2L 12766729 intergenic not near genes chr2L 12766818 intergenic not near genes chr2L 12766906 intergenic not near genes chr2L_12_12765001 chr2L_12765001 RAL-306_125b 463 chr2L 12781766 12781803 chr2L 12789259 12789296 Quasimodo 7 7493 11.5 7.5 9.5 0.7 7530 chr2L 12781766 intergenic not near genes chr2L 12785531 intergenic not near genes chr2L 12789296 intergenic not near genes chr2L_7_12785001 chr2L_12785001 RAL-306_125b 464 chr2L 12791568 12791626 chr2L 12795293 12795336 F-element 15 3717 6.5 11.5 9.0 1.5 3768 chr2L 12791568 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795336 intergenic not near genes chr2L_15_12790001 chr2L_12790001 RAL-306_125b 465 chr2L 12807390 12807467 chr2L 12807521 12807599 23 127 8.0 7.5 7.8 2.6 209 chr2L 12807390 intergenic CR43818 - chr2L 12807494 intergenic CR43818 - chr2L 12807599 intergenic CR43818 - chr2L_23_12805001 chr2L_12805001 RAL-306_125b 466 chr2L 12835506 12835578 chr2L 12835665 12835737 17 158 5.0 6.5 5.8 2.5 231 chr2L 12835506 intergenic not near genes chr2L 12835622 intergenic not near genes chr2L 12835737 intergenic not near genes chr2L_17_12835001 chr2L_12835001 RAL-306_125b 467 chr2L 12848379 12848449 chr2L 12848521 12848587 11 142 4.0 6.5 5.2 1.8 208 chr2L 12848379 intergenic not near genes chr2L 12848483 intergenic not near genes chr2L 12848587 intergenic not near genes chr2L_11_12845001 chr2L_12845001 RAL-306_125b 468 chr2L 12861671 12861684 chr2L 12863181 12863201 hobo 8 1514 7.5 7.0 7.2 1.0 1530 chr2L 12861671 intergenic not near genes chr2L 12862436 intergenic not near genes chr2L 12863201 intergenic not near genes chr2L_8_12860001 chr2L_12860001 RAL-306_125b 469 chr2L 12861694 12861715 chr2L 12863170 12863232 hobo 12 1502 6.5 5.5 6.0 1.7 1538 chr2L 12861694 intergenic not near genes chr2L 12862463 intergenic not near genes chr2L 12863232 intergenic not near genes chr2L_12_12860001 chr2L_12860001 RAL-306_125b 470 chr2L 12893987 12894016 chr2L 12895502 12895532 hobo 7 1515 8.0 6.5 7.2 0.9 1545 chr2L 12893987 intergenic not near genes chr2L 12894760 intergenic not near genes chr2L 12895532 intergenic not near genes chr2L_7_12890001 chr2L_12890001 RAL-306_125b 471 chr2L 12894018 12894042 chr2L 12895500 12895559 hobo 6 1510 6.0 6.0 6.0 0.9 1541 chr2L 12894018 intergenic not near genes chr2L 12894788 intergenic not near genes chr2L 12895559 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-306_125b 472 chr2L 12930444 12930487 chr2L 12930570 12930613 22 126 8.0 10.5 9.2 2.2 169 chr2L 12930444 intergenic not near genes chr2L 12930528 intergenic not near genes chr2L 12930613 intergenic not near genes chr2L_22_12930001 chr2L_12930001 RAL-306_125b 473 chr2L 12933809 12933872 chr2L 12941326 12941389 blood 19 7516 7.5 8.5 8.0 2.1 7580 chr2L 12933809 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941389 intergenic not near genes chr2L_19_12935001 chr2L_12935001 RAL-306_125b 474 chr2L 13032463 13032516 chr2L 13032602 13032631 10 141 8.5 8.0 8.2 1.1 168 chr2L 13032463 intron CG9932 - chr2L 13032547 intron CG9932 - chr2L 13032631 intron CG9932 - chr2L_10_13030001 chr2L_13030001 RAL-306_125b 475 chr2L 13043621 13043689 chr2L 13043748 13043816 28 125 8.5 1.5 5.0 4.7 195 chr2L 13043621 intron CG9932 - chr2L 13043718 intron CG9932 - chr2L 13043816 intron CG9932 - chr2L_28_13040001 chr2L_13040001 RAL-306_125b 476 chr2L 13049343 13049410 chr2L 13049481 13049547 25 134 8.0 10.5 9.2 2.5 204 chr2L 13049343 intron CG9932 - chr2L 13049445 intron CG9932 - chr2L 13049547 intron CG9932 - chr2L_25_13045001 chr2L_13045001 RAL-306_125b 477 chr2L 13093829 13093865 chr2L 13093957 13093993 15 128 7.5 11.0 9.2 1.5 164 chr2L 13093829 intergenic not near genes chr2L 13093911 intergenic not near genes chr2L 13093993 intergenic not near genes chr2L_15_13090001 chr2L_13090001 RAL-306_125b 478 chr2L 13109410 13109470 chr2L 13109588 13109647 23 177 6.5 6.5 6.5 3.1 237 chr2L 13109410 3` UTR CG5142 + chr2L 13109528 intergenic CG5142 + chr2L 13109647 intergenic CG5142 + chr2L_23_13105001 chr2L_13105001 RAL-306_125b 479 chr2L 13153951 13154094 chr2L 13154089 13154220 5 131 0.0 0.0 0.0 5.0 269 chr2L 13153951 intergenic not near genes chr2L 13154086 intergenic not near genes chr2L 13154220 intergenic not near genes chr2L_5_13150001 chr2L_13150001 RAL-306_125b 480 chr2L 13215338 13215409 chr2L 13215663 13215734 30 323 3.5 14.5 9.0 3.0 396 chr2L 13215338 5` UTR kek4 - chr2L 13215536 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215734 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_30_13215001 chr2L_13215001 RAL-306_125b 481 chr2L 13241913 13241921 chr2L 13244346 13244355 BS 4 2434 13.5 4.0 8.8 0.4 2442 chr2L 13241913 5` UTR CR45330 + chr2L 13243134 intron CR45330 + chr2L 13244355 5` UTR CR45330 + chr2L_4_13240001 chr2L_13240001 RAL-306_125b 482 chr2L 13241922 13241940 chr2L 13244342 13244348 BS 6 2424 13.0 4.0 8.5 0.6 2426 chr2L 13241922 5` UTR CR45330 + chr2L 13243135 intron CR45330 + chr2L 13244348 5` UTR CR45330 + chr2L_6_13240001 chr2L_13240001 RAL-306_125b 483 chr2L 13294887 13294896 chr2L 13295013 13295022 4 126 5.0 2.0 3.5 0.9 135 chr2L 13294887 intron CG31729 + chr2L 13294954 intron CG31729 + chr2L 13295022 intron CG31729 + chr2L_4_13290001 chr2L_13290001 RAL-306_125b 484 chr2L 13341732 13341800 chr2L 13342384 13342463 23 661 6.0 5.0 5.5 3.5 731 chr2L 13341732 intergenic not near genes chr2L 13342098 intergenic not near genes chr2L 13342463 intergenic not near genes chr2L_23_13340001 chr2L_13340001 RAL-306_125b 485 chr2L 13369260 13369319 chr2L 13369387 13369446 23 124 6.0 2.5 4.2 4.4 186 chr2L 13369260 5` UTR CG31855 + chr2L 13369353 5` UTR CG31855 + chr2L 13369446 exon CG31855 + chr2L_23_13365001 chr2L_13365001 RAL-306_125b 486 chr2L 13398672 13398747 chr2L 13398802 13398877 26 130 9.5 5.5 7.5 3.1 205 chr2L 13398672 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398877 3` UTR CR44600 - chr2L_26_13395001 chr2L_13395001 RAL-306_125b 487 chr2L 13405608 13405671 chr2L 13410455 13410518 Doc 18 4846 6.0 13.0 9.5 1.7 4910 chr2L 13405608 exon CG7110 + chr2L 13408063 intron CG7110 + chr2L 13410518 exon CG7110 + chr2L_18_13405001 chr2L_13405001 RAL-306_125b 488 chr2L 13449413 13449492 chr2L 13456899 13456978 Quasimodo 10 7484 4.5 4.5 4.5 1.8 7565 chr2L 13449413 intron,intron CG42784 +,Hsp60D - chr2L 13453196 intron CG42784 + chr2L 13456978 intron CG42784 + chr2L_10_13450001 chr2L_13450001 RAL-306_125b 489 chr2L 13481411 13481465 chr2L 13482068 13482122 jockey 23 655 11.0 12.0 11.5 1.8 711 chr2L 13481411 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482122 intron CG42784 + chr2L_23_13480001 chr2L_13480001 RAL-306_125b 490 chr2L 13522117 13522157 chr2L 13527659 13527697 Transpac 15 5562 0.5 7.0 3.8 3.1 5580 chr2L 13522117 intron B4 - chr2L 13524907 intron B4 - chr2L 13527697 intron B4 - chr2L_15_13520001 chr2L_13520001 RAL-306_125b 491 chr2L 13535951 13536028 chr2L 13536186 13536263 26 232 7.5 4.0 5.8 3.8 312 chr2L 13535951 intron B4 - chr2L 13536107 intron B4 - chr2L 13536263 intron B4 - chr2L_26_13535001 chr2L_13535001 RAL-306_125b 492 chr2L 13543916 13543966 chr2L 13544044 13544078 13 122 10.5 1.5 6.0 1.9 162 chr2L 13543916 intron B4 - chr2L 13543997 intron B4 - chr2L 13544078 intron B4 - chr2L_13_13540001 chr2L_13540001 RAL-306_125b 493 chr2L 13553875 13553887 chr2L 13554068 13554078 6 192 14.5 5.5 10.0 0.5 203 chr2L 13553875 intron kuz + chr2L 13553976 intron kuz + chr2L 13554078 intron kuz + chr2L_6_13550001 chr2L_13550001 RAL-306_125b 494 chr2L 13556580 13556602 chr2L 13556711 13556731 6 130 8.5 1.0 4.8 1.0 151 chr2L 13556580 intron kuz + chr2L 13556656 intron kuz + chr2L 13556731 intron kuz + chr2L_6_13555001 chr2L_13555001 RAL-306_125b 495 chr2L 13560360 13560421 chr2L 13565230 13565291 F-element 18 4870 12.0 6.0 9.0 1.8 4931 chr2L 13560360 intron kuz + chr2L 13562826 intron kuz + chr2L 13565291 intron kuz + chr2L_18_13560001 chr2L_13560001 RAL-306_125b 496 chr2L 13577717 13577778 chr2L 13577836 13577890 33 126 3.5 10.5 7.0 4.1 173 chr2L 13577717 intron kuz + chr2L 13577804 intron kuz + chr2L 13577890 intron kuz + chr2L_33_13575001 chr2L_13575001 RAL-306_125b 497 chr2L 13622092 13622171 chr2L 13622241 13622320 9 145 5.5 6.0 5.8 1.3 228 chr2L 13622092 intron kuz + chr2L 13622206 intron kuz + chr2L 13622320 intron kuz + chr2L_9_13620001 chr2L_13620001 RAL-306_125b 498 chr2L 13699531 13699548 chr2L 13699658 13699669 4 126 4.5 7.0 5.8 0.6 138 chr2L 13699531 intron CG31814 - chr2L 13699600 intron CG31814 - chr2L 13699669 intron CG31814 - chr2L_4_13695001 chr2L_13695001 RAL-306_125b 499 chr2L 13713510 13713574 chr2L 13713636 13713700 28 126 5.5 6.5 6.0 4.0 190 chr2L 13713510 intron CG31814 - chr2L 13713605 intron CG31814 - chr2L 13713700 intron CG31814 - chr2L_28_13710001 chr2L_13710001 RAL-306_125b 500 chr2L 13733725 13733788 chr2L 13733894 13733957 7 167 2.5 5.5 4.0 1.4 232 chr2L 13733725 intergenic not near genes chr2L 13733841 intergenic not near genes chr2L 13733957 intergenic not near genes chr2L_7_13730001 chr2L_13730001 RAL-306_125b 501 chr2L 13740854 13740909 chr2L 13740997 13741057 16 141 4.5 6.5 5.5 2.5 203 chr2L 13740854 intergenic not near genes chr2L 13740956 intergenic not near genes chr2L 13741057 intergenic not near genes chr2L_16_13740001 chr2L_13740001 RAL-306_125b 502 chr2L 13753235 13753305 chr2L 13753375 13753451 18 145 4.5 0.0 2.2 5.6 216 chr2L 13753235 intron,intron CR44846 +,TM9SF4 + chr2L 13753343 intron,intron CR44846 +,TM9SF4 + chr2L 13753451 intron,intron CR44846 +,TM9SF4 + chr2L_18_13750001 chr2L_13750001 RAL-306_125b 503 chr2L 13754138 13754212 chr2L 13754268 13754342 14 127 0.5 2.5 1.5 5.6 204 chr2L 13754138 intron,intron CR44846 +,TM9SF4 + chr2L 13754240 intron,intron CR44846 +,TM9SF4 + chr2L 13754342 intron,intron CR44846 +,TM9SF4 + chr2L_14_13750001 chr2L_13750001 RAL-306_125b 504 chr2L 13761772 13761819 chr2L 13762932 13762980 Doc 13 1158 12.0 13.5 12.8 0.9 1208 chr2L 13761772 intron TM9SF4 + chr2L 13762376 intron TM9SF4 + chr2L 13762980 intron TM9SF4 + chr2L_13_13760001 chr2L_13760001 RAL-306_125b 505 chr2L 13800134 13800202 chr2L 13800288 13800356 28 153 11.0 8.0 9.5 2.7 222 chr2L 13800134 intergenic Sec71 + chr2L 13800245 intergenic not near genes chr2L 13800356 intergenic not near genes chr2L_28_13800001 chr2L_13800001 RAL-306_125b 506 chr2L 13842083 13842162 chr2L 13842217 13842296 25 132 8.5 0.0 4.2 4.8 213 chr2L 13842083 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842296 intron CenG1A + chr2L_25_13840001 chr2L_13840001 RAL-306_125b 507 chr2L 13853047 13853105 chr2L 13862246 13862305 roo 19 9198 8.5 9.0 8.8 1.9 9258 chr2L 13853047 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862305 intron CenG1A + chr2L_19_13855001 chr2L_13855001 RAL-306_125b 508 chr2L 13866645 13866713 chr2L 13867324 13867392 6 679 24.5 19.5 22.0 0.3 747 chr2L 13866645 intron,3` UTR CenG1A +,CR44848 - chr2L 13867018 intron CenG1A + chr2L 13867392 intron CenG1A + chr2L_6_13865001 chr2L_13865001 RAL-306_125b 509 chr2L 13935238 13935273 chr2L 13935435 13935440 4 189 7.5 0.0 3.8 0.8 202 chr2L 13935238 intron Ance-3 + chr2L 13935339 intron Ance-3 + chr2L 13935440 intron Ance-3 + chr2L_4_13935001 chr2L_13935001 RAL-306_125b 510 chr2L 13952102 13952178 chr2L 13952234 13952310 16 132 7.0 4.5 5.8 2.4 208 chr2L 13952102 intron Ance-3 + chr2L 13952206 intron Ance-3 + chr2L 13952310 intron Ance-3 + chr2L_16_13950001 chr2L_13950001 RAL-306_125b 511 chr2L 13981478 13981546 chr2L 13981619 13981659 15 137 5.5 6.5 6.0 2.1 181 chr2L 13981478 exon NimC2 + chr2L 13981568 intron NimC2 + chr2L 13981659 intron NimC2 + chr2L_15_13980001 chr2L_13980001 RAL-306_125b 512 chr2L 14121744 14121807 chr2L 14121861 14121923 18 125 3.5 2.0 2.8 4.7 179 chr2L 14121744 intergenic not near genes chr2L 14121834 intergenic not near genes chr2L 14121923 intergenic not near genes chr2L_18_14120001 chr2L_14120001 RAL-306_125b 513 chr2L 14151557 14151625 chr2L 14151685 14151752 18 126 6.5 8.0 7.2 2.2 195 chr2L 14151557 intron CG17341 + chr2L 14151654 intron CG17341 + chr2L 14151752 intron CG17341 + chr2L_18_14150001 chr2L_14150001 RAL-306_125b 514 chr2L 14152572 14152605 chr2L 14152713 14152746 10 139 6.0 6.5 6.2 1.4 174 chr2L 14152572 intron CG17341 + chr2L 14152659 intron CG17341 + chr2L 14152746 intron CG17341 + chr2L_10_14150001 chr2L_14150001 RAL-306_125b 515 chr2L 14160637 14160719 chr2L 14160773 14160855 28 134 3.5 2.5 3.0 7.0 218 chr2L 14160637 intergenic CG17341 + chr2L 14160746 intergenic CG17341 +,CG43332 - chr2L 14160855 intergenic CG17341 +,CG43332 - chr2L_28_14160001 chr2L_14160001 RAL-306_125b 516 chr2L 14180018 14180036 chr2L 14180144 14180162 6 126 17.0 9.0 13.0 0.4 144 chr2L 14180018 intron CG43333 - chr2L 14180090 intron CG43333 - chr2L 14180162 intron CG43333 - chr2L_6_14180001 chr2L_14180001 RAL-306_125b 517 chr2L 14180037 14180092 chr2L 14180143 14180218 19 121 6.5 9.0 7.8 2.2 181 chr2L 14180037 intron CG43333 - chr2L 14180128 intron CG43333 - chr2L 14180218 exon CG43333 - chr2L_19_14180001 chr2L_14180001 RAL-306_125b 518 chr2L 14290054 14290121 chr2L 14290186 14290252 28 131 7.0 7.0 7.0 3.5 198 chr2L 14290054 intron wb + chr2L 14290153 intron wb + chr2L 14290252 intron wb + chr2L_28_14290001 chr2L_14290001 RAL-306_125b 519 chr2L 14337017 14337089 chr2L 14337155 14337227 29 133 7.0 8.0 7.5 3.4 210 chr2L 14337017 intron CG33090 + chr2L 14337122 intron CG33090 + chr2L 14337227 intron CG33090 + chr2L_29_14335001 chr2L_14335001 RAL-306_125b 520 chr2L 14452398 14452476 chr2L 14452558 14452650 15 161 7.0 0.0 3.5 3.3 252 chr2L 14452398 intergenic not near genes chr2L 14452524 intergenic not near genes chr2L 14452650 intergenic not near genes chr2L_15_14450001 chr2L_14450001 RAL-306_125b 521 chr2L 14503388 14503433 chr2L 14503517 14503562 17 126 6.0 6.5 6.2 2.4 174 chr2L 14503388 intergenic not near genes chr2L 14503475 intergenic not near genes chr2L 14503562 intergenic not near genes chr2L_17_14500001 chr2L_14500001 RAL-306_125b 522 chr2L 14525531 14525600 chr2L 14525656 14525732 25 131 11.0 8.0 9.5 2.4 201 chr2L 14525531 exon CG33648 + chr2L 14525632 3` UTR CG33648 + chr2L 14525732 intergenic CG33648 + chr2L_25_14525001 chr2L_14525001 RAL-306_125b 523 chr2L 14526902 14526919 chr2L 14527028 14527045 8 126 9.5 14.0 11.8 0.6 143 chr2L 14526902 intergenic not near genes chr2L 14526974 intergenic not near genes chr2L 14527045 intergenic not near genes chr2L_8_14525001 chr2L_14525001 RAL-306_125b 524 chr2L 14547073 14547144 chr2L 14547206 14547277 19 132 7.5 6.0 6.8 2.4 204 chr2L 14547073 intergenic CG4218 - chr2L 14547175 intergenic CG4218 - chr2L 14547277 intergenic CG4218 - chr2L_19_14545001 chr2L_14545001 RAL-306_125b 525 chr2L 14588340 14588408 chr2L 14588544 14588607 20 199 0.5 11.5 6.0 2.9 267 chr2L 14588340 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588607 intergenic CG42680 - chr2L_20_14585001 chr2L_14585001 RAL-306_125b 526 chr2L 14588638 14588671 chr2L 14588979 14589012 9 341 6.0 7.0 6.5 1.2 374 chr2L 14588638 intergenic CG42680 - chr2L 14588825 intergenic not near genes chr2L 14589012 intergenic not near genes chr2L_9_14585001 chr2L_14585001 RAL-306_125b 527 chr2L 14601926 14601993 chr2L 14602060 14602127 21 133 7.5 3.5 5.5 3.2 201 chr2L 14601926 exon osp - chr2L 14602026 intron osp - chr2L 14602127 exon osp - chr2L_21_14600001 chr2L_14600001 RAL-306_125b 528 chr2L 14618868 14618884 chr2L 14619299 14619315 jockey 7 431 6.0 5.0 5.5 1.1 447 chr2L 14618868 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619092 intron osp - chr2L 14619315 intron osp - chr2L_7_14615001 chr2L_14615001 RAL-306_125b 529 chr2L 14642525 14642604 chr2L 14651738 14651817 roo 9 9213 2.5 5.5 4.0 1.8 9292 chr2L 14642525 intron osp - chr2L 14647171 intron osp - chr2L 14651817 intron osp - chr2L_9_14645001 chr2L_14645001 RAL-306_125b 530 chr2L 14681764 14681773 chr2L 14682019 14682028 9 255 15.5 11.5 13.5 0.6 264 chr2L 14681764 intron osp - chr2L 14681896 intron osp - chr2L 14682028 intron osp - chr2L_9_14680001 chr2L_14680001 RAL-306_125b 531 chr2L 14681776 14681832 chr2L 14682016 14682049 13 247 7.5 10.0 8.8 1.3 273 chr2L 14681776 intron osp - chr2L 14681912 intron osp - chr2L 14682049 intron osp - chr2L_13_14680001 chr2L_14680001 RAL-306_125b 532 chr2L 14707164 14707234 chr2L 14707333 14707403 19 168 11.0 0.0 5.5 2.9 239 chr2L 14707164 intergenic not near genes chr2L 14707284 intergenic not near genes chr2L 14707403 intergenic not near genes chr2L_19_14705001 chr2L_14705001 RAL-306_125b 533 chr2L 14839708 14839779 chr2L 14839833 14839905 24 126 6.5 6.5 6.5 3.2 197 chr2L 14839708 intergenic not near genes chr2L 14839806 intergenic not near genes chr2L 14839905 intergenic not near genes chr2L_24_14835001 chr2L_14835001 RAL-306_125b 534 chr2L 14840933 14840994 chr2L 14841071 14841131 21 137 9.5 6.0 7.8 2.4 198 chr2L 14840933 3` UTR CR43805 - chr2L 14841032 3` UTR CR43805 - chr2L 14841131 3` UTR CR43805 - chr2L_21_14840001 chr2L_14840001 RAL-306_125b 535 chr2L 14840995 14841005 chr2L 14841069 14841135 5 123 6.5 6.0 6.2 0.7 140 chr2L 14840995 3` UTR CR43805 - chr2L 14841065 3` UTR CR43805 - chr2L 14841135 3` UTR CR43805 - chr2L_5_14840001 chr2L_14840001 RAL-306_125b 536 chr2L 14889904 14889987 chr2L 14890379 14890409 jockey 25 471 1.0 2.5 1.8 8.9 505 chr2L 14889904 intergenic not near genes chr2L 14890156 intergenic not near genes chr2L 14890409 intergenic not near genes chr2L_25_14890001 chr2L_14890001 RAL-306_125b 537 chr2L 14984343 14984402 chr2L 14991995 14992057 opus 7 7653 9.5 4.5 7.0 0.9 7714 chr2L 14984343 intron mol - chr2L 14988200 intron mol - chr2L 14992057 intron mol - chr2L_7_14985001 chr2L_14985001 RAL-306_125b 538 chr2L 15021405 15021465 chr2L 15021526 15021591 6 123 7.0 4.5 5.8 0.9 186 chr2L 15021405 intron GABA-B-R1 + chr2L 15021498 intron GABA-B-R1 + chr2L 15021591 intron GABA-B-R1 + chr2L_6_15020001 chr2L_15020001 RAL-306_125b 539 chr2L 15025986 15026013 chr2L 15026117 15026142 10 130 7.0 8.0 7.5 1.2 156 chr2L 15025986 exon GABA-B-R1 + chr2L 15026064 intron GABA-B-R1 + chr2L 15026142 intron GABA-B-R1 + chr2L_10_15025001 chr2L_15025001 RAL-306_125b 540 chr2L 15026015 15026048 chr2L 15026106 15026179 9 121 3.5 7.5 5.5 1.4 164 chr2L 15026015 exon GABA-B-R1 + chr2L 15026097 intron GABA-B-R1 + chr2L 15026179 exon GABA-B-R1 + chr2L_9_15025001 chr2L_15025001 RAL-306_125b 541 chr2L 15044658 15044732 chr2L 15044784 15044821 15 124 8.0 1.0 4.5 2.7 163 chr2L 15044658 intergenic ck - chr2L 15044740 intergenic ck - chr2L 15044821 intergenic ck - chr2L_15_15040001 chr2L_15040001 RAL-306_125b 542 chr2L 15103818 15103855 chr2L 15103965 15104002 14 147 9.5 0.5 5.0 2.3 184 chr2L 15103818 intergenic not near genes chr2L 15103910 intergenic not near genes chr2L 15104002 intergenic not near genes chr2L_14_15100001 chr2L_15100001 RAL-306_125b 543 chr2L 15138936 15138992 chr2L 15139074 15139123 13 137 8.0 0.0 4.0 2.6 187 chr2L 15138936 intergenic not near genes chr2L 15139030 intergenic not near genes chr2L 15139123 intergenic not near genes chr2L_13_15135001 chr2L_15135001 RAL-306_125b 544 chr2L 15195336 15195413 chr2L 15195491 15195567 15 149 4.0 3.5 3.8 3.1 231 chr2L 15195336 intron CG4168 - chr2L 15195452 intron CG4168 - chr2L 15195567 intron CG4168 - chr2L_15_15195001 chr2L_15195001 RAL-306_125b 545 chr2L 15216073 15216092 chr2L 15216237 15216256 4 164 4.0 0.0 2.0 1.3 183 chr2L 15216073 3` UTR CG43230 + chr2L 15216164 intergenic CG43230 + chr2L 15216256 intergenic CG43230 + chr2L_4_15215001 chr2L_15215001 RAL-306_125b 546 chr2L 15312987 15313039 chr2L 15313126 15313178 9 138 5.5 6.0 5.8 1.3 191 chr2L 15312987 intergenic not near genes chr2L 15313082 intergenic not near genes chr2L 15313178 intergenic not near genes chr2L_9_15310001 chr2L_15310001 RAL-306_125b 547 chr2L 15318900 15318926 chr2L 15319042 15319068 7 142 4.5 3.5 4.0 1.4 168 chr2L 15318900 5` UTR nht - chr2L 15318984 intergenic nht - chr2L 15319068 intergenic nht - chr2L_7_15315001 chr2L_15315001 RAL-306_125b 548 chr2L 15346011 15346077 chr2L 15346133 15346206 17 122 3.5 9.0 6.2 2.4 195 chr2L 15346011 intergenic not near genes chr2L 15346108 intergenic not near genes chr2L 15346206 intergenic not near genes chr2L_17_15345001 chr2L_15345001 RAL-306_125b 549 chr2L 15444394 15444403 chr2L 15444521 15444541 6 134 13.0 13.0 13.0 0.4 147 chr2L 15444394 intergenic not near genes chr2L 15444468 intergenic not near genes chr2L 15444541 intergenic not near genes chr2L_6_15440001 chr2L_15440001 RAL-306_125b 550 chr2L 15444408 15444431 chr2L 15444520 15444569 15 134 8.0 12.0 10.0 1.4 161 chr2L 15444408 intergenic not near genes chr2L 15444488 intergenic not near genes chr2L 15444569 intergenic not near genes chr2L_15_15440001 chr2L_15440001 RAL-306_125b 551 chr2L 15446013 15446075 chr2L 15453522 15453594 blood 20 7516 6.0 1.5 3.8 4.2 7581 chr2L 15446013 intergenic not near genes chr2L 15449804 intergenic not near genes chr2L 15453594 intergenic not near genes chr2L_20_15445001 chr2L_15445001 RAL-306_125b 552 chr2L 15482528 15482604 chr2L 15482714 15482784 19 185 1.5 4.0 2.8 5.0 256 chr2L 15482528 intergenic not near genes chr2L 15482656 intergenic not near genes chr2L 15482784 intergenic not near genes chr2L_19_15480001 chr2L_15480001 RAL-306_125b 553 chr2L 15490027 15490046 chr2L 15490193 15490212 9 166 0.0 11.0 5.5 1.4 185 chr2L 15490027 intergenic not near genes chr2L 15490120 intergenic not near genes chr2L 15490212 intergenic not near genes chr2L_9_15490001 chr2L_15490001 RAL-306_125b 554 chr2L 15499863 15499907 chr2L 15500001 15500045 18 137 9.0 5.5 7.2 2.2 182 chr2L 15499863 intron lace + chr2L 15499954 intron lace + chr2L 15500045 intron lace + chr2L_18_15495001 chr2L_15495001 RAL-306_125b 555 chr2L 15514278 15514318 chr2L 15514411 15514452 18 133 10.0 10.5 10.2 1.6 174 chr2L 15514278 intergenic not near genes chr2L 15514365 intergenic not near genes chr2L 15514452 intergenic not near genes chr2L_18_15510001 chr2L_15510001 RAL-306_125b 556 chr2L 15541027 15541103 chr2L 15541177 15541253 17 147 6.0 9.0 7.5 2.0 226 chr2L 15541027 intergenic not near genes chr2L 15541140 intergenic not near genes chr2L 15541253 intergenic not near genes chr2L_17_15540001 chr2L_15540001 RAL-306_125b 557 chr2L 15586370 15586427 chr2L 15593472 15593529 297 15 7102 8.5 5.5 7.0 1.9 7159 chr2L 15586370 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593529 intergenic not near genes chr2L_15_15585001 chr2L_15585001 RAL-306_125b 558 chr2L 15598744 15598798 chr2L 15598873 15598927 21 127 3.5 0.0 1.8 7.5 183 chr2L 15598744 intergenic not near genes chr2L 15598836 intergenic not near genes chr2L 15598927 intergenic not near genes chr2L_21_15595001 chr2L_15595001 RAL-306_125b 559 chr2L 15626322 15626389 chr2L 15626451 15626475 8 116 5.0 4.0 4.5 1.5 153 chr2L 15626322 intergenic not near genes chr2L 15626398 intergenic not near genes chr2L 15626475 intergenic not near genes chr2L_8_15625001 chr2L_15625001 RAL-306_125b 560 chr2L 15636628 15636692 chr2L 15636754 15636818 15 125 8.0 6.5 7.2 1.8 190 chr2L 15636628 intergenic not near genes chr2L 15636723 intergenic not near genes chr2L 15636818 intergenic not near genes chr2L_15_15635001 chr2L_15635001 RAL-306_125b 561 chr2L 15749977 15750268 chr2L 15750140 15750402 7 155 0.0 0.0 0.0 7.0 425 chr2L 15749977 intron l(2)35Di - chr2L 15750190 intron l(2)35Di - chr2L 15750402 intron l(2)35Di - chr2L_7_15750001 chr2L_15750001 RAL-306_125b 562 chr2L 15768390 15768435 chr2L 15768511 15768567 11 130 5.5 12.0 8.8 1.1 177 chr2L 15768390 intergenic wek -,Ku80 - chr2L 15768478 intergenic wek -,Ku80 - chr2L 15768567 intergenic Ku80 -,wek - chr2L_11_15765001 chr2L_15765001 RAL-306_125b 563 chr2L 15773543 15773584 chr2L 15773671 15773715 INE-1 12 131 4.0 12.5 8.2 1.3 172 chr2L 15773543 intergenic CG31826 - chr2L 15773629 intergenic not near genes chr2L 15773715 intergenic not near genes chr2L_12_15770001 chr2L_15770001 RAL-306_125b 564 chr2L 15776352 15776409 chr2L 15776497 15776554 13 145 7.0 9.0 8.0 1.4 202 chr2L 15776352 intergenic CG43760 - chr2L 15776453 3` UTR CG43760 - chr2L 15776554 exon CG43760 - chr2L_13_15775001 chr2L_15775001 RAL-306_125b 565 chr2L 15777769 15777822 chr2L 15778005 15778058 15 235 0.0 8.0 4.0 3.0 289 chr2L 15777769 intergenic not near genes chr2L 15777914 intergenic not near genes chr2L 15778058 intergenic not near genes chr2L_15_15775001 chr2L_15775001 RAL-306_125b 566 chr2L 15790168 15790202 chr2L 15790287 15790315 4 121 7.5 13.0 10.2 0.4 147 chr2L 15790168 intergenic CG18109 + chr2L 15790242 intergenic CG18109 + chr2L 15790315 intergenic CG18109 + chr2L_4_15790001 chr2L_15790001 RAL-306_125b 567 chr2L 15823310 15823368 chr2L 15823436 15823494 18 126 8.5 6.0 7.2 2.2 184 chr2L 15823310 intergenic CR44601 - chr2L 15823402 intergenic CR44601 - chr2L 15823494 intergenic not near genes chr2L_18_15820001 chr2L_15820001 RAL-306_125b 568 chr2L 15826848 15826892 chr2L 15829291 15829336 Tabor 20 2443 0.0 11.5 5.8 2.9 2488 chr2L 15826848 intergenic not near genes chr2L 15828092 intergenic not near genes chr2L 15829336 intergenic not near genes chr2L_20_15825001 chr2L_15825001 RAL-306_125b 569 chr2L 15887668 15887725 chr2L 15887851 15887908 21 181 5.0 3.0 4.0 4.2 240 chr2L 15887668 intergenic not near genes chr2L 15887788 intergenic not near genes chr2L 15887908 intergenic not near genes chr2L_21_15885001 chr2L_15885001 RAL-306_125b 570 chr2L 15906144 15906213 chr2L 15906283 15906352 24 135 4.0 10.5 7.2 2.9 208 chr2L 15906144 intron beat-Ib - chr2L 15906248 intron beat-Ib - chr2L 15906352 exon beat-Ib - chr2L_24_15905001 chr2L_15905001 RAL-306_125b 571 chr2L 15921780 15921814 chr2L 15921968 15922007 8 192 10.0 6.0 8.0 0.9 227 chr2L 15921780 intron beat-Ib - chr2L 15921894 intron beat-Ib - chr2L 15922007 intron beat-Ib - chr2L_8_15920001 chr2L_15920001 RAL-306_125b 572 chr2L 15935163 15935174 chr2L 15935302 15935313 9 138 13.0 0.0 6.5 1.2 150 chr2L 15935163 intron beat-Ib - chr2L 15935238 intron beat-Ib - chr2L 15935313 intron beat-Ib - chr2L_9_15935001 chr2L_15935001 RAL-306_125b 573 chr2L 15935175 15935208 chr2L 15935294 15935348 7 136 9.5 0.0 4.8 1.2 173 chr2L 15935175 intron beat-Ib - chr2L 15935262 intron beat-Ib - chr2L 15935348 intron beat-Ib - chr2L_7_15935001 chr2L_15935001 RAL-306_125b 574 chr2L 15947107 15947185 chr2L 15947239 15947276 14 116 0.5 5.0 2.8 3.7 169 chr2L 15947107 intron beat-Ib - chr2L 15947192 intron beat-Ib - chr2L 15947276 intron beat-Ib - chr2L_14_15945001 chr2L_15945001 RAL-306_125b 575 chr2L 15955984 15956041 chr2L 15957501 15957558 hobo 11 1513 8.0 10.5 9.2 1.1 1574 chr2L 15955984 intron beat-Ib - chr2L 15956771 intron beat-Ib - chr2L 15957558 intron beat-Ib - chr2L_11_15955001 chr2L_15955001 RAL-306_125b 576 chr2L 15971932 15972002 chr2L 15972076 15972150 9 141 0.0 5.5 2.8 2.4 218 chr2L 15971932 intergenic not near genes chr2L 15972041 intergenic not near genes chr2L 15972150 intergenic not near genes chr2L_9_15970001 chr2L_15970001 RAL-306_125b 577 chr2L 16001455 16001489 chr2L 16001558 16001627 17 135 2.5 8.0 5.2 2.7 172 chr2L 16001455 intron beat-Ic + chr2L 16001541 intron beat-Ic + chr2L 16001627 intron beat-Ic + chr2L_17_16000001 chr2L_16000001 RAL-306_125b 578 chr2L 16008658 16008678 chr2L 16008809 16008829 5 151 7.5 0.0 3.8 1.0 171 chr2L 16008658 intron beat-Ic + chr2L 16008744 intron beat-Ic + chr2L 16008829 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 RAL-306_125b 579 chr2L 16043519 16043591 chr2L 16043654 16043725 19 134 7.5 4.5 6.0 2.7 206 chr2L 16043519 intron,intron BicC +,CG45084 + chr2L 16043622 intron,intron BicC +,CG45084 + chr2L 16043725 intron,intron BicC +,CG45084 + chr2L_19_16040001 chr2L_16040001 RAL-306_125b 580 chr2L 16051600 16051640 chr2L 16051701 16051759 9 121 2.0 10.5 6.2 1.2 159 chr2L 16051600 intron beat-Ia + chr2L 16051680 intron beat-Ia + chr2L 16051759 intron beat-Ia + chr2L_9_16050001 chr2L_16050001 RAL-306_125b 581 chr2L 16056110 16056156 chr2L 16056236 16056282 9 126 2.5 5.0 3.8 1.9 172 chr2L 16056110 intron beat-Ia + chr2L 16056196 intron beat-Ia + chr2L 16056282 exon beat-Ia + chr2L_9_16055001 chr2L_16055001 RAL-306_125b 582 chr2L 16062246 16062311 chr2L 16062608 16062673 20 361 6.0 8.5 7.2 2.4 427 chr2L 16062246 intron beat-Ia + chr2L 16062460 intron beat-Ia + chr2L 16062673 intron beat-Ia + chr2L_20_16060001 chr2L_16060001 RAL-306_125b 583 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 19.5 20.5 20.0 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-306_125b 584 chr2L 16125166 16125172 chr2L 16125299 16125342 6 162 0.0 7.5 3.8 1.2 176 chr2L 16125166 intergenic not near genes chr2L 16125254 intergenic not near genes chr2L 16125342 intergenic not near genes chr2L_6_16125001 chr2L_16125001 RAL-306_125b 585 chr2L 16141121 16141184 chr2L 16146378 16146441 copia 13 5256 5.5 10.0 7.8 1.5 5320 chr2L 16141121 intergenic not near genes chr2L 16143781 intergenic not near genes chr2L 16146441 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-306_125b 586 chr2L 16153694 16153746 chr2L 16160812 16160830 297 11 7113 11.0 6.5 8.8 1.1 7136 chr2L 16153694 intergenic not near genes chr2L 16157262 intergenic not near genes chr2L 16160830 intergenic not near genes chr2L_11_16155001 chr2L_16155001 RAL-306_125b 587 chr2L 16208504 16208530 chr2L 16208912 16208938 6 408 3.5 12.0 7.8 0.7 434 chr2L 16208504 intergenic not near genes chr2L 16208721 intergenic not near genes chr2L 16208938 intergenic not near genes chr2L_6_16205001 chr2L_16205001 RAL-306_125b 588 chr2L 9084339 9084340 chr2L 16217660 16217660 4 7133320 19.5 20.5 20.0 0.2 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-306_125b 589 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 19.5 20.5 20.0 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-306_125b 590 chr2L 16242023 16242089 chr2L 16242165 16242204 15 137 7.0 0.0 3.5 3.3 181 chr2L 16242023 5` UTR CG42818 + chr2L 16242114 exon CG42818 + chr2L 16242204 exon CG42818 + chr2L_15_16240001 chr2L_16240001 RAL-306_125b 591 chr2L 16276174 16276219 chr2L 16276303 16276314 5 113 11.5 10.0 10.8 0.4 140 chr2L 16276174 intron crp - chr2L 16276244 intron crp - chr2L 16276314 intron crp - chr2L_5_16275001 chr2L_16275001 RAL-306_125b 592 chr2L 16280249 16280287 chr2L 16281467 16281504 1360 5 1214 9.0 8.5 8.8 0.5 1255 chr2L 16280249 intron crp - chr2L 16280876 intron crp - chr2L 16281504 intron crp - chr2L_5_16280001 chr2L_16280001 RAL-306_125b 593 chr2L 16354728 16354786 chr2L 16354869 16354928 16 140 6.0 5.5 5.8 2.4 200 chr2L 16354728 intergenic CaBP1 -,CG4455 + chr2L 16354828 intergenic CaBP1 -,CG4455 + chr2L 16354928 3` UTR CaBP1 - chr2L_16_16350001 chr2L_16350001 RAL-306_125b 594 chr2L 16363909 16363969 chr2L 16364205 16364260 19 296 0.0 9.5 4.8 3.3 351 chr2L 16363909 intergenic not near genes chr2L 16364084 intergenic not near genes chr2L 16364260 intergenic not near genes chr2L_19_16360001 chr2L_16360001 RAL-306_125b 595 chr2L 16365501 16365507 chr2L 16365727 16365733 4 226 13.5 17.5 15.5 0.2 232 chr2L 16365501 intergenic jhamt + chr2L 16365617 intergenic jhamt + chr2L 16365733 intergenic jhamt + chr2L_4_16365001 chr2L_16365001 RAL-306_125b 596 chr2L 16394915 16394929 chr2L 16395021 16395054 9 128 5.0 13.5 9.2 0.9 139 chr2L 16394915 intergenic not near genes chr2L 16394984 intergenic not near genes chr2L 16395054 intergenic not near genes chr2L_9_16390001 chr2L_16390001 RAL-306_125b 597 chr2L 16432579 16432601 chr2L 16432726 16432748 6 147 0.0 3.0 1.5 2.4 169 chr2L 16432579 intron CG5888 - chr2L 16432664 intron CG5888 - chr2L 16432748 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-306_125b 598 chr2L 16443942 16443965 chr2L 16444069 16444071 5 122 21.0 3.0 12.0 0.4 129 chr2L 16443942 intron CG5888 - chr2L 16444006 intron CG5888 - chr2L 16444071 intron CG5888 - chr2L_5_16440001 chr2L_16440001 RAL-306_125b 599 chr2L 16443971 16444020 chr2L 16444068 16444160 16 126 11.5 4.0 7.8 1.8 189 chr2L 16443971 intron CG5888 - chr2L 16444066 intron CG5888 - chr2L 16444160 intron CG5888 - chr2L_16_16440001 chr2L_16440001 RAL-306_125b 600 chr2L 16507888 16507963 chr2L 16508021 16508101 11 133 0.0 8.0 4.0 2.2 213 chr2L 16507888 intergenic CG5953 -,Tpr2 + chr2L 16507994 intergenic CG5953 -,Tpr2 + chr2L 16508101 3` UTR CG5953 - chr2L_11_16505001 chr2L_16505001 RAL-306_125b 601 chr2L 16511920 16511967 chr2L 16519084 16519131 HMS-Beagle 16 7164 18.0 8.0 13.0 1.1 7211 chr2L 16511920 intron CG5953 - chr2L 16515526 intron CG5953 - chr2L 16519131 intron CG5953 - chr2L_16_16515001 chr2L_16515001 RAL-306_125b 602 chr2L 16522025 16522095 chr2L 16522173 16522215 7 144 0.0 2.0 1.0 3.5 190 chr2L 16522025 intron CG5953 - chr2L 16522120 intron CG5953 - chr2L 16522215 intron CG5953 - chr2L_7_16520001 chr2L_16520001 RAL-306_125b 603 chr2L 16548445 16548463 chr2L 16548617 16548635 7 172 10.0 0.5 5.2 1.1 190 chr2L 16548445 intron CG42389 + chr2L 16548540 intron CG42389 + chr2L 16548635 intron CG42389 + chr2L_7_16545001 chr2L_16545001 RAL-306_125b 604 chr2L 16670369 16670447 chr2L 16670496 16670574 27 126 5.0 7.0 6.0 3.9 205 chr2L 16670369 intron Trpgamma - chr2L 16670472 intron Trpgamma - chr2L 16670574 intron Trpgamma - chr2L_27_16670001 chr2L_16670001 RAL-306_125b 605 chr2L 16694093 16694159 chr2L 16694224 16694265 18 123 8.5 10.0 9.2 1.8 172 chr2L 16694093 intron grp + chr2L 16694179 intron grp + chr2L 16694265 intron grp + chr2L_18_16690001 chr2L_16690001 RAL-306_125b 606 chr2L 16695215 16695286 chr2L 16695349 16695420 18 134 8.0 8.5 8.2 2.0 205 chr2L 16695215 intron grp + chr2L 16695318 intron grp + chr2L 16695420 intron grp + chr2L_18_16695001 chr2L_16695001 RAL-306_125b 607 chr2L 16697019 16697084 chr2L 16697262 16697282 15 239 7.5 6.0 6.8 1.9 263 chr2L 16697019 intron grp + chr2L 16697150 intron grp + chr2L 16697282 intron grp + chr2L_15_16695001 chr2L_16695001 RAL-306_125b 608 chr2L 16703617 16703651 chr2L 16703911 16703942 8 293 0.5 12.0 6.2 1.1 325 chr2L 16703617 intergenic not near genes chr2L 16703780 intergenic not near genes chr2L 16703942 intergenic CG31808 - chr2L_8_16700001 chr2L_16700001 RAL-306_125b 609 chr2L 16709027 16709100 chr2L 16709161 16709234 18 132 6.0 4.0 5.0 3.0 207 chr2L 16709027 intron CG31808 - chr2L 16709130 intron CG31808 - chr2L 16709234 intron CG31808 - chr2L_18_16705001 chr2L_16705001 RAL-306_125b 610 chr2L 16799467 16799504 chr2L 16799659 16799696 14 192 0.0 9.0 4.5 2.5 229 chr2L 16799467 intron Ugt36Bc + chr2L 16799582 intron Ugt36Bc + chr2L 16799696 5` UTR Ugt36Bc + chr2L_14_16795001 chr2L_16795001 RAL-306_125b 611 chr2L 16958067 16958124 chr2L 16962905 16962962 Doc 12 4838 8.5 10.0 9.2 1.2 4895 chr2L 16958067 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962962 intergenic not near genes chr2L_12_16960001 chr2L_16960001 RAL-306_125b 612 chr2L 16995476 16995542 chr2L 16995606 16995632 18 125 10.5 6.0 8.2 2.0 156 chr2L 16995476 intergenic not near genes chr2L 16995554 intergenic not near genes chr2L 16995632 intergenic not near genes chr2L_18_16995001 chr2L_16995001 RAL-306_125b 613 chr2L 17000083 17000140 chr2L 17000255 17000307 10 171 9.0 7.5 8.2 1.1 224 chr2L 17000083 intergenic not near genes chr2L 17000195 intergenic not near genes chr2L 17000307 intergenic not near genes chr2L_10_17000001 chr2L_17000001 RAL-306_125b 614 chr2L 17005367 17005427 chr2L 17005514 17005574 10 147 7.5 7.5 7.5 1.2 207 chr2L 17005367 intergenic not near genes chr2L 17005470 intergenic not near genes chr2L 17005574 intergenic not near genes chr2L_10_17005001 chr2L_17005001 RAL-306_125b 615 chr2L 17032456 17032516 chr2L 17032591 17032650 17 134 5.5 4.5 5.0 2.8 194 chr2L 17032456 intergenic not near genes chr2L 17032553 intergenic not near genes chr2L 17032650 intergenic not near genes chr2L_17_17030001 chr2L_17030001 RAL-306_125b 616 chr2L 17052363 17052441 chr2L 17052525 17052603 23 162 4.5 3.0 3.8 4.8 240 chr2L 17052363 intergenic not near genes chr2L 17052483 intergenic not near genes chr2L 17052603 intergenic not near genes chr2L_23_17050001 chr2L_17050001 RAL-306_125b 617 chr2L 17087338 17087405 chr2L 17087500 17087508 16 158 4.0 4.5 4.2 3.1 170 chr2L 17087338 intergenic CG12620 + chr2L 17087423 intergenic CG12620 + chr2L 17087508 intergenic CG12620 + chr2L_16_17085001 chr2L_17085001 RAL-306_125b 618 chr2L 17101892 17101912 chr2L 17101999 17102039 9 124 6.5 7.0 6.8 1.2 147 chr2L 17101892 intergenic not near genes chr2L 17101966 intergenic not near genes chr2L 17102039 intergenic not near genes chr2L_9_17100001 chr2L_17100001 RAL-306_125b 619 chr2L 17113341 17113363 chr2L 17113475 17113497 5 133 7.0 5.5 6.2 0.7 156 chr2L 17113341 intergenic not near genes chr2L 17113419 intergenic not near genes chr2L 17113497 intergenic not near genes chr2L_5_17110001 chr2L_17110001 RAL-306_125b 620 chr2L 17113365 17113405 chr2L 17113474 17113539 7 130 1.5 5.5 3.5 1.6 174 chr2L 17113365 intergenic not near genes chr2L 17113452 intergenic not near genes chr2L 17113539 intergenic not near genes chr2L_7_17110001 chr2L_17110001 RAL-306_125b 621 chr2L 17120813 17120865 chr2L 17120942 17120994 12 128 8.0 5.5 6.8 1.5 181 chr2L 17120813 intergenic not near genes chr2L 17120904 intergenic not near genes chr2L 17120994 intergenic not near genes chr2L_12_17120001 chr2L_17120001 RAL-306_125b 622 chr2L 17130247 17130247 chr2L 18910140 18910140 5 1779893 21.5 23.5 22.5 0.2 1779893 chr2L 17130247 intergenic not near genes chr2L 18020194 intron rdo + chr2L 18910140 intergenic not near genes chr2L_5_18020001 chr2L_18020001 RAL-306_125b 623 chr2L 17158690 17158742 chr2L 17158841 17158894 13 152 4.5 0.0 2.2 4.1 204 chr2L 17158690 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158894 intron,intron CG34106 +,beat-IIIa + chr2L_13_17155001 chr2L_17155001 RAL-306_125b 624 chr2L 17167542 17167588 chr2L 17167833 17167878 pogo 16 290 5.0 10.5 7.8 1.8 336 chr2L 17167542 intron,intron CG34106 +,beat-IIIa + chr2L 17167710 intron,intron CG34106 +,beat-IIIa + chr2L 17167878 intron,intron CG34106 +,beat-IIIa + chr2L_16_17165001 chr2L_17165001 RAL-306_125b 625 chr2L 17199119 17199182 chr2L 17200636 17200699 hobo 19 1517 10.0 11.5 10.8 1.6 1580 chr2L 17199119 intron beat-IIIc - chr2L 17199909 intron beat-IIIc - chr2L 17200699 intron beat-IIIc - chr2L_19_17195001 chr2L_17195001 RAL-306_125b 626 chr2L 17273147 17273217 chr2L 17277980 17278039 F-element 16 4830 8.0 4.5 6.2 2.2 4892 chr2L 17273147 intergenic not near genes chr2L 17275593 intergenic not near genes chr2L 17278039 intergenic not near genes chr2L_16_17275001 chr2L_17275001 RAL-306_125b 627 chr2L 17285797 17285873 chr2L 17285924 17286000 26 126 6.0 7.0 6.5 3.5 203 chr2L 17285797 intergenic CG15140 + chr2L 17285898 intergenic CG15140 + chr2L 17286000 intergenic CG15140 + chr2L_26_17285001 chr2L_17285001 RAL-306_125b 628 chr2L 17327872 17327929 chr2L 17328008 17328065 18 135 11.5 10.5 11.0 1.5 193 chr2L 17327872 intergenic not near genes chr2L 17327968 intergenic not near genes chr2L 17328065 intergenic not near genes chr2L_18_17325001 chr2L_17325001 RAL-306_125b 629 chr2L 17331927 17331940 chr2L 17332058 17332071 6 131 6.5 11.5 9.0 0.6 144 chr2L 17331927 intergenic not near genes chr2L 17331999 intergenic not near genes chr2L 17332071 intergenic not near genes chr2L_6_17330001 chr2L_17330001 RAL-306_125b 630 chr2L 17335485 17335536 chr2L 17336715 17336767 1360 9 1231 5.0 6.5 5.8 1.3 1282 chr2L 17335485 intergenic not near genes chr2L 17336126 intergenic not near genes chr2L 17336767 intergenic not near genes chr2L_9_17335001 chr2L_17335001 RAL-306_125b 631 chr2L 17359973 17360046 chr2L 17360201 17360274 17 224 6.5 2.0 4.2 3.3 301 chr2L 17359973 intergenic not near genes chr2L 17360124 intergenic not near genes chr2L 17360274 intergenic not near genes chr2L_17_17360001 chr2L_17360001 RAL-306_125b 632 chr2L 17379663 17379706 chr2L 17379798 17379841 10 133 4.5 5.0 4.8 1.7 178 chr2L 17379663 intron Lrch - chr2L 17379752 intron Lrch - chr2L 17379841 intron Lrch - chr2L_10_17375001 chr2L_17375001 RAL-306_125b 633 chr2L 17397958 17398033 chr2L 17398088 17398097 13 132 0.0 6.0 3.0 3.2 139 chr2L 17397958 intron CLIP-190 + chr2L 17398028 intron CLIP-190 + chr2L 17398097 intron CLIP-190 + chr2L_13_17395001 chr2L_17395001 RAL-306_125b 634 chr2L 17399286 17399363 chr2L 17399425 17399515 31 150 8.0 0.0 4.0 6.2 229 chr2L 17399286 intron CLIP-190 + chr2L 17399400 intron CLIP-190 + chr2L 17399515 intron CLIP-190 + chr2L_31_17395001 chr2L_17395001 RAL-306_125b 635 chr2L 17399588 17399594 chr2L 17399725 17399731 4 137 5.5 0.0 2.8 1.1 143 chr2L 17399588 intron CLIP-190 + chr2L 17399660 intron CLIP-190 + chr2L 17399731 intron CLIP-190 + chr2L_4_17395001 chr2L_17395001 RAL-306_125b 636 chr2L 17425719 17425794 chr2L 17425896 17425971 21 174 6.5 10.5 8.5 2.2 252 chr2L 17425719 intron Dif - chr2L 17425845 intron Dif - chr2L 17425971 intron Dif - chr2L_21_17425001 chr2L_17425001 RAL-306_125b 637 chr2L 17432008 17432045 chr2L 17432159 17432202 1360 6 156 0.0 10.0 5.0 1.0 194 chr2L 17432008 intron Dif - chr2L 17432105 intron Dif - chr2L 17432202 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-306_125b 638 chr2L 17467559 17467632 chr2L 17467703 17467776 38 144 10.0 12.5 11.2 3.1 217 chr2L 17467559 intron BicD - chr2L 17467668 intron BicD - chr2L 17467776 intron BicD - chr2L_38_17465001 chr2L_17465001 RAL-306_125b 639 chr2L 17511621 17511658 chr2L 17511813 17511850 9 192 5.5 11.0 8.2 1.0 229 chr2L 17511621 intron Dhc36C + chr2L 17511736 intron Dhc36C + chr2L 17511850 exon Dhc36C + chr2L_9_17510001 chr2L_17510001 RAL-306_125b 640 chr2L 17565334 17565409 chr2L 17565472 17565549 18 141 8.0 7.5 7.8 2.0 215 chr2L 17565334 intergenic not near genes chr2L 17565442 intergenic not near genes chr2L 17565549 intergenic not near genes chr2L_18_17565001 chr2L_17565001 RAL-306_125b 641 chr2L 17579846 17579903 chr2L 17579974 17580031 16 128 8.0 8.0 8.0 1.8 185 chr2L 17579846 5` UTR CR45698 + chr2L 17579938 5` UTR CR45698 + chr2L 17580031 intergenic CR45698 + chr2L_16_17575001 chr2L_17575001 RAL-306_125b 642 chr2L 17602621 17602691 chr2L 17602757 17602827 21 135 6.0 7.0 6.5 2.8 206 chr2L 17602621 exon Sytalpha + chr2L 17602724 intron Sytalpha + chr2L 17602827 intron Sytalpha + chr2L_21_17600001 chr2L_17600001 RAL-306_125b 643 chr2L 17607439 17607476 chr2L 17607587 17607624 5 148 9.5 0.0 4.8 0.9 185 chr2L 17607439 intergenic CR44412 - chr2L 17607532 intergenic CR44412 - chr2L 17607624 intergenic CR44412 - chr2L_5_17605001 chr2L_17605001 RAL-306_125b 644 chr2L 17675899 17675959 chr2L 17676028 17676088 16 129 7.5 7.0 7.2 2.0 189 chr2L 17675899 intron CadN - chr2L 17675994 intron CadN - chr2L 17676088 intron CadN - chr2L_16_17675001 chr2L_17675001 RAL-306_125b 645 chr2L 17687470 17687514 chr2L 17692265 17692309 F-element 16 4795 10.0 5.0 7.5 1.9 4839 chr2L 17687470 intron CadN - chr2L 17689890 intron CadN - chr2L 17692309 intron CadN - chr2L_16_17685001 chr2L_17685001 RAL-306_125b 646 chr2L 17692901 17692974 chr2L 17693065 17693130 27 163 9.5 8.0 8.8 2.8 229 chr2L 17692901 intron CadN - chr2L 17693016 intron CadN - chr2L 17693130 intron CadN - chr2L_27_17690001 chr2L_17690001 RAL-306_125b 647 chr2L 17703618 17703678 chr2L 17703759 17703819 15 140 9.5 5.0 7.2 1.8 201 chr2L 17703618 intron CadN - chr2L 17703718 intron CadN - chr2L 17703819 intron CadN - chr2L_15_17700001 chr2L_17700001 RAL-306_125b 648 chr2L 17709075 17709143 chr2L 17709209 17709277 12 134 4.5 5.0 4.8 2.1 202 chr2L 17709075 intron CadN - chr2L 17709176 intron CadN - chr2L 17709277 intron CadN - chr2L_12_17705001 chr2L_17705001 RAL-306_125b 649 chr2L 17723743 17723795 chr2L 17723886 17723938 17 142 5.5 5.0 5.2 2.7 195 chr2L 17723743 intron CadN - chr2L 17723840 intron CadN - chr2L 17723938 intron CadN - chr2L_17_17720001 chr2L_17720001 RAL-306_125b 650 chr2L 17727822 17727871 chr2L 17729339 17729388 hobo 13 1514 5.0 10.0 7.5 1.5 1566 chr2L 17727822 intron CadN - chr2L 17728605 intron CadN - chr2L 17729388 intron CadN - chr2L_13_17725001 chr2L_17725001 RAL-306_125b 651 chr2L 17741927 17741976 chr2L 17742053 17742102 13 124 6.0 11.0 8.5 1.4 175 chr2L 17741927 intron CadN - chr2L 17742014 intron CadN - chr2L 17742102 intron CadN - chr2L_13_17740001 chr2L_17740001 RAL-306_125b 652 chr2L 17747950 17747963 chr2L 17748077 17748089 6 126 15.0 6.0 10.5 0.5 139 chr2L 17747950 intron CadN - chr2L 17748020 intron CadN - chr2L 17748089 intron CadN - chr2L_6_17745001 chr2L_17745001 RAL-306_125b 653 chr2L 17747973 17748028 chr2L 17748070 17748153 13 124 7.0 6.5 6.8 1.7 180 chr2L 17747973 intron CadN - chr2L 17748063 intron CadN - chr2L 17748153 intron CadN - chr2L_13_17745001 chr2L_17745001 RAL-306_125b 654 chr2L 17795975 17796038 chr2L 17796106 17796169 18 130 5.5 2.5 4.0 3.6 194 chr2L 17795975 intron CadN2 - chr2L 17796072 intron CadN2 - chr2L 17796169 intron CadN2 - chr2L_18_17795001 chr2L_17795001 RAL-306_125b 655 chr2L 17819878 17819940 chr2L 17825131 17825193 copia 12 5253 7.5 6.5 7.0 1.5 5315 chr2L 17819878 intron CadN2 - chr2L 17822536 intron CadN2 - chr2L 17825193 intron CadN2 - chr2L_12_17820001 chr2L_17820001 RAL-306_125b 656 chr2L 17879994 17880026 chr2L 17880094 17880163 7 124 7.5 5.0 6.2 1.0 169 chr2L 17879994 intergenic not near genes chr2L 17880078 intergenic not near genes chr2L 17880163 intergenic not near genes chr2L_7_17880001 chr2L_17880001 RAL-306_125b 657 chr2L 17897180 17897248 chr2L 17897310 17897354 20 123 3.0 6.0 4.5 3.6 174 chr2L 17897180 intergenic not near genes chr2L 17897267 intergenic not near genes chr2L 17897354 intergenic not near genes chr2L_20_17895001 chr2L_17895001 RAL-306_125b 658 chr2L 17911915 17911959 chr2L 17914141 17914187 pogo 16 2226 14.5 7.5 11.0 1.3 2272 chr2L 17911915 intergenic not near genes chr2L 17913051 intergenic not near genes chr2L 17914187 intergenic CG43271 - chr2L_16_17910001 chr2L_17910001 RAL-306_125b 659 chr2L 17911960 17911978 chr2L 17914137 17914206 pogo 5 2209 8.5 7.0 7.8 0.6 2246 chr2L 17911960 intergenic not near genes chr2L 17913083 intergenic not near genes chr2L 17914206 intergenic CG43271 - chr2L_5_17910001 chr2L_17910001 RAL-306_125b 660 chr2L 17925972 17926010 chr2L 17926208 17926246 15 235 1.5 6.5 4.0 3.0 274 chr2L 17925972 intergenic not near genes chr2L 17926109 intergenic not near genes chr2L 17926246 intergenic not near genes chr2L_15_17925001 chr2L_17925001 RAL-306_125b 661 chr2L 17933487 17933558 chr2L 17933927 17933999 26 439 7.0 5.5 6.2 3.6 512 chr2L 17933487 intergenic not near genes chr2L 17933743 intergenic not near genes chr2L 17933999 intergenic not near genes chr2L_26_17930001 chr2L_17930001 RAL-306_125b 662 chr2L 17938648 17938722 chr2L 17938784 17938858 13 136 4.0 8.0 6.0 1.9 210 chr2L 17938648 intergenic CR44399 - chr2L 17938753 intergenic CR44399 - chr2L 17938858 intergenic CR44399 - chr2L_13_17935001 chr2L_17935001 RAL-306_125b 663 chr2L 17943304 17943378 chr2L 17943623 17943699 21 315 4.5 2.5 3.5 4.7 395 chr2L 17943304 intergenic not near genes chr2L 17943502 intergenic not near genes chr2L 17943699 intergenic not near genes chr2L_21_17940001 chr2L_17940001 RAL-306_125b 664 chr2L 17943847 17943914 chr2L 17944000 17944067 27 151 4.0 6.5 5.2 4.4 220 chr2L 17943847 intergenic not near genes chr2L 17943957 intergenic not near genes chr2L 17944067 intergenic not near genes chr2L_27_17940001 chr2L_17940001 RAL-306_125b 665 chr2L 17951902 17951970 chr2L 17953419 17953487 hobo 25 1514 5.0 5.0 5.0 4.2 1585 chr2L 17951902 intergenic CR44398 -,CR44397 - chr2L 17952694 intergenic not near genes chr2L 17953487 intergenic not near genes chr2L_25_17950001 chr2L_17950001 RAL-306_125b 666 chr2L 17989961 17990013 chr2L 17990081 17990124 13 113 11.5 10.0 10.8 1.1 163 chr2L 17989961 intergenic Prosbeta5R2 + chr2L 17990042 intergenic Prosbeta5R2 + chr2L 17990124 intergenic Prosbeta5R2 + chr2L_13_17990001 chr2L_17990001 RAL-306_125b 667 chr2L 18051832 18051863 chr2L 18061029 18061060 roo 20 9194 19.0 7.5 13.2 1.4 9228 chr2L 18051832 intron rdo + chr2L 18056446 intron rdo + chr2L 18061060 intron rdo + chr2L_20_18055001 chr2L_18055001 RAL-306_125b 668 chr2L 18051867 18051894 chr2L 18061023 18061091 roo 12 9192 11.5 5.5 8.5 1.3 9224 chr2L 18051867 intron rdo + chr2L 18056479 intron rdo + chr2L 18061091 intron rdo + chr2L_12_18055001 chr2L_18055001 RAL-306_125b 669 chr2L 18079770 18079843 chr2L 18079905 18079967 17 134 4.0 7.5 5.8 2.5 197 chr2L 18079770 intron Arr1 + chr2L 18079868 intron Arr1 + chr2L 18079967 exon Arr1 + chr2L_17_18075001 chr2L_18075001 RAL-306_125b 670 chr2L 18111193 18111243 chr2L 18111334 18111338 9 133 13.0 8.5 10.8 0.8 145 chr2L 18111193 intergenic not near genes chr2L 18111266 intergenic not near genes chr2L 18111338 intergenic not near genes chr2L_9_18110001 chr2L_18110001 RAL-306_125b 671 chr2L 18235052 18235077 chr2L 18235204 18235259 6 160 7.5 11.5 9.5 0.6 207 chr2L 18235052 intron CG42750 - chr2L 18235156 intron CG42750 - chr2L 18235259 intron CG42750 - chr2L_6_18235001 chr2L_18235001 RAL-306_125b 672 chr2L 18250522 18250533 chr2L 18250684 18250695 6 162 11.0 3.5 7.2 0.7 173 chr2L 18250522 intron CG42750 - chr2L 18250608 intron CG42750 - chr2L 18250695 intron CG42750 - chr2L_6_18250001 chr2L_18250001 RAL-306_125b 673 chr2L 18255454 18255511 chr2L 18255569 18255646 12 131 8.0 5.5 6.8 1.5 192 chr2L 18255454 intron CG42750 - chr2L 18255550 intron CG42750 - chr2L 18255646 intron CG42750 - chr2L_12_18255001 chr2L_18255001 RAL-306_125b 674 chr2L 18274012 18274067 chr2L 18274134 18274189 22 133 7.5 7.0 7.2 2.7 177 chr2L 18274012 intron CG42750 - chr2L 18274100 intron CG42750 - chr2L 18274189 intron CG42750 - chr2L_22_18270001 chr2L_18270001 RAL-306_125b 675 chr2L 18291487 18291554 chr2L 18291635 18291716 11 151 5.5 1.5 3.5 2.4 229 chr2L 18291487 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291602 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291716 5` UTR CR44693 + chr2L_11_18290001 chr2L_18290001 RAL-306_125b 676 chr2L 18394358 18394427 chr2L 18394492 18394561 24 132 5.5 6.5 6.0 3.4 203 chr2L 18394358 intergenic not near genes chr2L 18394460 intergenic not near genes chr2L 18394561 intergenic not near genes chr2L_24_18390001 chr2L_18390001 RAL-306_125b 677 chr2L 18407984 18408048 chr2L 18412818 18412881 Doc 23 4832 8.0 6.5 7.2 2.8 4897 chr2L 18407984 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412881 intergenic not near genes chr2L_23_18410001 chr2L_18410001 RAL-306_125b 678 chr2L 18417508 18417535 chr2L 18417656 18417683 14 148 13.5 4.0 8.8 1.4 175 chr2L 18417508 intergenic not near genes chr2L 18417596 intergenic not near genes chr2L 18417683 intergenic not near genes chr2L_14_18415001 chr2L_18415001 RAL-306_125b 679 chr2L 18417992 18417998 chr2L 18418120 18418126 5 128 1.5 18.0 9.8 0.5 134 chr2L 18417992 intergenic not near genes chr2L 18418059 intergenic not near genes chr2L 18418126 intergenic not near genes chr2L_5_18415001 chr2L_18415001 RAL-306_125b 680 chr2L 18496694 18496719 chr2L 18496789 18496814 20 128 0.5 9.0 4.8 3.4 120 chr2L 18496694 intron kon - chr2L 18496754 intron kon - chr2L 18496814 intron kon - chr2L_20_18495001 chr2L_18495001 RAL-306_125b 681 chr2L 18538544 18538593 chr2L 18538676 18538724 11 132 1.5 11.5 6.5 1.5 180 chr2L 18538544 intron Pde11 - chr2L 18538634 intron Pde11 - chr2L 18538724 intron Pde11 - chr2L_11_18535001 chr2L_18535001 RAL-306_125b 682 chr2L 18575582 18575589 chr2L 18575729 18575736 4 147 12.5 2.5 7.5 0.5 154 chr2L 18575582 intron Pde11 - chr2L 18575659 intron Pde11 - chr2L 18575736 intron Pde11 - chr2L_4_18575001 chr2L_18575001 RAL-306_125b 683 chr2L 18811369 18811427 chr2L 18811501 18811559 17 132 8.0 3.0 5.5 2.6 190 chr2L 18811369 intergenic CG10570 -,CG42502 - chr2L 18811464 intergenic CG10570 -,CG42502 - chr2L 18811559 intergenic not near genes chr2L_17_18810001 chr2L_18810001 RAL-306_125b 684 chr2L 18811619 18811687 chr2L 18811878 18811946 25 259 4.5 3.5 4.0 5.0 327 chr2L 18811619 intergenic not near genes chr2L 18811782 intergenic not near genes chr2L 18811946 intergenic not near genes chr2L_25_18810001 chr2L_18810001 RAL-306_125b 685 chr2L 18812526 18812535 chr2L 18812831 18812848 4 311 0.5 9.5 5.0 0.7 322 chr2L 18812526 intergenic CG17325 +,CG42305 + chr2L 18812687 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812848 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_4_18810001 chr2L_18810001 RAL-306_125b 686 chr2L 18812537 18812549 chr2L 18812825 18812862 5 308 0.5 8.0 4.2 1.0 325 chr2L 18812537 intergenic CG17325 +,CG42305 + chr2L 18812700 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812862 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_5_18810001 chr2L_18810001 RAL-306_125b 687 chr2L 18812551 18812581 chr2L 18812824 18812894 14 309 0.5 8.0 4.2 2.7 343 chr2L 18812551 intergenic CG17325 +,CG42305 + chr2L 18812722 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812894 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_14_18810001 chr2L_18810001 RAL-306_125b 688 chr2L 18847872 18847920 chr2L 18848305 18848374 15 450 3.5 6.5 5.0 2.5 502 chr2L 18847872 intron CG17321 + chr2L 18848123 intron CG17321 + chr2L 18848374 intron CG17321 + chr2L_15_18845001 chr2L_18845001 RAL-306_125b 689 chr2L 18883813 18883884 chr2L 18883945 18884016 25 130 9.5 8.0 8.8 2.6 203 chr2L 18883813 intergenic not near genes chr2L 18883914 intergenic not near genes chr2L 18884016 intergenic not near genes chr2L_25_18880001 chr2L_18880001 RAL-306_125b 690 chr2L 18898383 18898401 chr2L 18898485 18898528 4 123 11.5 0.5 6.0 0.6 145 chr2L 18898383 intergenic not near genes chr2L 18898456 intergenic not near genes chr2L 18898528 intergenic not near genes chr2L_4_18895001 chr2L_18895001 RAL-306_125b 691 chr2L 19077266 19077305 chr2L 19078734 19078796 13 1488 9.0 1.5 5.2 2.1 1530 chr2L 19077266 intergenic CG10700 - chr2L 19078031 exon CG10700 - chr2L 19078796 exon CG10700 - chr2L_13_19075001 chr2L_19075001 RAL-306_125b 692 chr2L 19106326 19106400 chr2L 19106456 19106530 18 124 6.5 5.0 5.8 2.6 204 chr2L 19106326 intron Lim3 - chr2L 19106428 intron Lim3 - chr2L 19106530 intron Lim3 - chr2L_18_19105001 chr2L_19105001 RAL-306_125b 693 chr2L 19147320 19147387 chr2L 19154405 19154472 297 28 7084 9.5 7.0 8.2 3.0 7152 chr2L 19147320 intron brat + chr2L 19150896 intron brat + chr2L 19154472 intron brat + chr2L_28_19150001 chr2L_19150001 RAL-306_125b 694 chr2L 19178330 19178372 chr2L 19178475 19178517 12 143 11.5 5.5 8.5 1.3 187 chr2L 19178330 3` UTR brat + chr2L 19178424 3` UTR brat + chr2L 19178517 3` UTR brat + chr2L_12_19175001 chr2L_19175001 RAL-306_125b 695 chr2L 19228414 19228454 chr2L 19229329 19229348 16 913 13.5 1.5 7.5 1.9 934 chr2L 19228414 intergenic not near genes chr2L 19228881 intergenic not near genes chr2L 19229348 intergenic not near genes chr2L_16_19225001 chr2L_19225001 RAL-306_125b 696 chr2L 19246785 19246850 chr2L 19246915 19246980 30 128 5.5 8.5 7.0 3.8 195 chr2L 19246785 intergenic not near genes chr2L 19246882 intergenic not near genes chr2L 19246980 intergenic not near genes chr2L_30_19245001 chr2L_19245001 RAL-306_125b 697 chr2L 19270848 19270922 chr2L 19270988 19271062 10 139 0.0 8.5 4.2 1.9 214 chr2L 19270848 intron CR44190 - chr2L 19270955 intron CR44190 - chr2L 19271062 intron CR44190 - chr2L_10_19270001 chr2L_19270001 RAL-306_125b 698 chr2L 19344984 19345003 chr2L 19357243 19357262 blood 4 12259 13.5 11.0 12.2 0.3 12278 chr2L 19344984 intron dnt - chr2L 19351123 intron dnt - chr2L 19357262 intron dnt - chr2L_4_19350001 chr2L_19350001 RAL-306_125b 699 chr2L 19345006 19345031 chr2L 19357225 19357265 blood 12 12248 7.0 7.5 7.2 1.5 12259 chr2L 19345006 intron dnt - chr2L 19351136 intron dnt - chr2L 19357265 intron dnt - chr2L_12_19350001 chr2L_19350001 RAL-306_125b 700 chr2L 19357499 19357567 chr2L 19357639 19357646 28 137 5.5 5.5 5.5 4.3 147 chr2L 19357499 intron dnt - chr2L 19357572 intron dnt - chr2L 19357646 intron dnt - chr2L_28_19355001 chr2L_19355001 RAL-306_125b 701 chr2L 19364036 19364100 chr2L 19364166 19364229 24 129 3.5 12.0 7.8 2.7 193 chr2L 19364036 intergenic CG13086 + chr2L 19364132 intergenic CG13086 + chr2L 19364229 intergenic CG13086 + chr2L_24_19360001 chr2L_19360001 RAL-306_125b 702 chr2L 19365505 19365563 chr2L 19365620 19365689 7 124 0.0 9.0 4.5 1.3 184 chr2L 19365505 intergenic CG13086 + chr2L 19365597 intergenic CG13086 + chr2L 19365689 intergenic CG13086 + chr2L_7_19365001 chr2L_19365001 RAL-306_125b 703 chr2L 19378302 19378315 chr2L 19378430 19378448 7 132 17.0 8.5 12.8 0.5 146 chr2L 19378302 intergenic not near genes chr2L 19378375 intergenic not near genes chr2L 19378448 intergenic not near genes chr2L_7_19375001 chr2L_19375001 RAL-306_125b 704 chr2L 19378325 19378368 chr2L 19378422 19378452 13 121 6.0 9.0 7.5 1.5 127 chr2L 19378325 intergenic not near genes chr2L 19378388 intergenic not near genes chr2L 19378452 intergenic not near genes chr2L_13_19375001 chr2L_19375001 RAL-306_125b 705 chr2L 19380465 19380527 chr2L 19380595 19380657 6 126 3.5 5.0 4.2 1.2 192 chr2L 19380465 intergenic CG17350 + chr2L 19380561 intergenic CG17350 + chr2L 19380657 intergenic CG17350 + chr2L_6_19380001 chr2L_19380001 RAL-306_125b 706 chr2L 19405573 19405635 chr2L 19405713 19405775 20 140 4.5 2.0 3.2 4.8 202 chr2L 19405573 intron Pax - chr2L 19405674 intron Pax - chr2L 19405775 intron Pax - chr2L_20_19405001 chr2L_19405001 RAL-306_125b 707 chr2L 19407666 19407740 chr2L 19407913 19407987 22 245 6.5 5.0 5.8 3.2 321 chr2L 19407666 intron Pax - chr2L 19407826 intron Pax - chr2L 19407987 intron Pax - chr2L_22_19405001 chr2L_19405001 RAL-306_125b 708 chr2L 19424906 19424981 chr2L 19425131 19425171 25 218 9.0 11.5 10.2 2.2 265 chr2L 19424906 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L 19425038 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L 19425171 intron,intron,intron Pax -,CG13085 +,CG16771 + chr2L_25_19425001 chr2L_19425001 RAL-306_125b 709 chr2L 19437472 19437531 chr2L 19437613 19437673 16 140 6.5 3.5 5.0 2.7 201 chr2L 19437472 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437673 exon CG10237 - chr2L_16_19435001 chr2L_19435001 RAL-306_125b 710 chr2L 19441025 19441086 chr2L 19441152 19441213 17 125 10.0 8.0 9.0 1.7 188 chr2L 19441025 intron CG10237 - chr2L 19441119 intron CG10237 - chr2L 19441213 5` UTR CG10237 - chr2L_17_19440001 chr2L_19440001 RAL-306_125b 711 chr2L 19544585 19544612 chr2L 19544699 19544722 5 117 11.0 15.0 13.0 0.4 137 chr2L 19544585 exon ref(2)P + chr2L 19544654 exon ref(2)P + chr2L 19544722 exon ref(2)P + chr2L_5_19540001 chr2L_19540001 RAL-306_125b 712 chr2L 19562480 19562560 chr2L 19562611 19562690 14 130 0.5 4.0 2.2 4.4 210 chr2L 19562480 exon Tep5 + chr2L 19562585 intron Tep5 + chr2L 19562690 exon Tep5 + chr2L_14_19560001 chr2L_19560001 RAL-306_125b 713 chr2L 19620069 19620119 chr2L 19621108 19621141 jockey 15 1034 6.5 9.0 7.8 1.7 1072 chr2L 19620069 intron Lar + chr2L 19620605 intron Lar + chr2L 19621141 intron Lar + chr2L_15_19620001 chr2L_19620001 RAL-306_125b 714 chr2L 19627271 19627321 chr2L 19627409 19627438 13 134 5.5 7.5 6.5 1.7 167 chr2L 19627271 intron Lar + chr2L 19627354 intron Lar + chr2L 19627438 intron Lar + chr2L_13_19625001 chr2L_19625001 RAL-306_125b 715 chr2L 19652522 19652606 chr2L 19674006 19674016 opus 29 21481 6.5 6.5 6.5 3.9 21494 chr2L 19652522 intron Lar + chr2L 19663269 intron Lar + chr2L 19674016 intron Lar + chr2L_29_19660001 chr2L_19660001 RAL-306_125b 716 chr2L 19703500 19703562 chr2L 19712686 19712748 roo 22 9185 6.0 9.5 7.8 2.5 9248 chr2L 19703500 intron Lar + chr2L 19708124 intron Lar + chr2L 19712748 intron Lar + chr2L_22_19705001 chr2L_19705001 RAL-306_125b 717 chr2L 19718376 19718507 chr2L 19718502 19718638 9 129 1.0 1.0 1.0 4.5 262 chr2L 19718376 intron Lar + chr2L 19718507 intron Lar + chr2L 19718638 intron Lar + chr2L_9_19715001 chr2L_19715001 RAL-306_125b 718 chr2L 19737320 19737379 chr2L 19740822 19740883 1360 13 3509 6.5 4.0 5.2 2.1 3563 chr2L 19737320 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740883 intergenic not near genes chr2L_13_19735001 chr2L_19735001 RAL-306_125b 719 chr2L 19762757 19762830 chr2L 19763049 19763122 pogo 8 289 3.5 5.0 4.2 1.5 365 chr2L 19762757 exon fbp - chr2L 19762940 intron fbp - chr2L 19763122 intron fbp - chr2L_8_19760001 chr2L_19760001 RAL-306_125b 720 chr2L 19776233 19776287 chr2L 19776371 19776435 22 147 7.5 12.0 9.8 2.0 202 chr2L 19776233 3` UTR CdGAPr - chr2L 19776334 3` UTR CdGAPr - chr2L 19776435 3` UTR CdGAPr - chr2L_22_19775001 chr2L_19775001 RAL-306_125b 721 chr2L 19846210 19846271 chr2L 19846343 19846402 15 128 1.0 13.5 7.2 1.8 192 chr2L 19846210 intron sick + chr2L 19846306 intron sick + chr2L 19846402 intron sick + chr2L_15_19845001 chr2L_19845001 RAL-306_125b 722 chr2L 19901451 19901507 chr2L 19901592 19901660 19 148 8.0 9.0 8.5 2.0 209 chr2L 19901451 intron sick + chr2L 19901556 intron sick + chr2L 19901660 intron sick + chr2L_19_19900001 chr2L_19900001 RAL-306_125b 723 chr2L 19911247 19911275 chr2L 19911384 19911413 11 138 17.0 7.5 12.2 0.8 166 chr2L 19911247 intron,3` UTR sick +,CR43097 - chr2L 19911330 intron,3` UTR sick +,CR43097 - chr2L 19911413 intron,3` UTR sick +,CR43097 - chr2L_11_19910001 chr2L_19910001 RAL-306_125b 724 chr2L 19911278 19911319 chr2L 19911380 19911436 13 133 8.0 6.5 7.2 1.6 158 chr2L 19911278 intron,3` UTR sick +,CR43097 - chr2L 19911357 intron,3` UTR sick +,CR43097 - chr2L 19911436 intron,3` UTR sick +,CR43097 - chr2L_13_19910001 chr2L_19910001 RAL-306_125b 725 chr2L 19950167 19950205 chr2L 19950291 19950337 17 130 4.5 3.5 4.0 3.4 170 chr2L 19950167 intron sick + chr2L 19950252 intron sick + chr2L 19950337 intron sick + chr2L_17_19950001 chr2L_19950001 RAL-306_125b 726 chr2L 19969039 19969105 chr2L 19969168 19969234 30 128 10.0 10.5 10.2 2.7 195 chr2L 19969039 3` UTR CG43861 - chr2L 19969136 3` UTR CG43861 - chr2L 19969234 3` UTR CG43861 - chr2L_30_19965001 chr2L_19965001 RAL-306_125b 727 chr2L 20005831 20005896 chr2L 20010957 20011022 flea 18 5124 9.5 8.5 9.0 1.8 5191 chr2L 20005831 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20011022 intron CG43861 - chr2L_18_20005001 chr2L_20005001 RAL-306_125b 728 chr2L 20057012 20057075 chr2L 20057127 20057195 26 120 8.5 9.5 9.0 2.6 183 chr2L 20057012 intergenic not near genes chr2L 20057104 intergenic not near genes chr2L 20057195 intergenic not near genes chr2L_26_20055001 chr2L_20055001 RAL-306_125b 729 chr2L 20115534 20115592 chr2L 20115669 20115729 9 137 1.0 5.5 3.2 2.1 195 chr2L 20115534 intergenic not near genes chr2L 20115632 intergenic not near genes chr2L 20115729 intergenic not near genes chr2L_9_20115001 chr2L_20115001 RAL-306_125b 730 chr2L 20124292 20124336 chr2L 20124420 20124464 16 128 13.0 6.5 9.8 1.5 172 chr2L 20124292 intergenic not near genes chr2L 20124378 intergenic not near genes chr2L 20124464 intergenic not near genes chr2L_16_20120001 chr2L_20120001 RAL-306_125b 731 chr2L 20124343 20124355 chr2L 20124409 20124483 7 119 9.5 7.5 8.5 0.7 140 chr2L 20124343 intergenic not near genes chr2L 20124413 intergenic not near genes chr2L 20124483 intergenic not near genes chr2L_7_20120001 chr2L_20120001 RAL-306_125b 732 chr2L 20269561 20269566 chr2L 20269835 20269840 5 274 18.0 5.5 11.8 0.4 279 chr2L 20269561 intergenic not near genes chr2L 20269700 intergenic not near genes chr2L 20269840 intergenic not near genes chr2L_5_20265001 chr2L_20265001 RAL-306_125b 733 chr2L 20269569 20269631 chr2L 20269832 20269890 21 269 6.5 5.0 5.8 3.1 321 chr2L 20269569 intergenic not near genes chr2L 20269730 intergenic not near genes chr2L 20269890 intergenic not near genes chr2L_21_20265001 chr2L_20265001 RAL-306_125b 734 chr2L 20271224 20271264 chr2L 20271348 20271397 13 127 14.0 9.5 11.8 1.0 173 chr2L 20271224 intergenic not near genes chr2L 20271310 intergenic not near genes chr2L 20271397 intergenic not near genes chr2L_13_20270001 chr2L_20270001 RAL-306_125b 735 chr2L 20272075 20272141 chr2L 20282836 20282902 copia 21 10759 5.5 4.5 5.0 3.5 10827 chr2L 20272075 intergenic not near genes chr2L 20277488 intergenic not near genes chr2L 20282902 intergenic not near genes chr2L_21_20275001 chr2L_20275001 RAL-306_125b 736 chr2L 20296460 20296519 chr2L 20296591 20296650 14 130 1.5 5.5 3.5 3.1 190 chr2L 20296460 intergenic CR43414 - chr2L 20296555 intergenic CR43414 - chr2L 20296650 3` UTR CR43414 - chr2L_14_20295001 chr2L_20295001 RAL-306_125b 737 chr2L 20298780 20298848 chr2L 20298913 20298981 24 131 6.0 6.5 6.2 3.3 201 chr2L 20298780 intergenic not near genes chr2L 20298880 intergenic not near genes chr2L 20298981 intergenic not near genes chr2L_24_20295001 chr2L_20295001 RAL-306_125b 738 chr2L 20299986 20300021 chr2L 20300094 20300137 5 116 9.0 7.0 8.0 0.6 151 chr2L 20299986 intergenic not near genes chr2L 20300062 intergenic not near genes chr2L 20300137 intergenic not near genes chr2L_5_20300001 chr2L_20300001 RAL-306_125b 739 chr2L 20302949 20303014 chr2L 20303089 20303099 12 135 4.0 0.5 2.2 3.8 150 chr2L 20302949 intergenic not near genes chr2L 20303024 intergenic not near genes chr2L 20303099 intergenic not near genes chr2L_12_20300001 chr2L_20300001 RAL-306_125b 740 chr2L 20303159 20303165 chr2L 20310677 20310683 blood 4 7518 0.0 18.5 9.2 0.4 7524 chr2L 20303159 intergenic not near genes chr2L 20306921 intergenic not near genes chr2L 20310683 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-306_125b 741 chr2L 20303167 20303181 chr2L 20310671 20310699 blood 7 7516 0.0 18.5 9.2 0.7 7532 chr2L 20303167 intergenic not near genes chr2L 20306933 intergenic not near genes chr2L 20310699 intergenic not near genes chr2L_7_20305001 chr2L_20305001 RAL-306_125b 742 chr2L 20310832 20310892 chr2L 20310962 20311022 17 127 7.5 6.5 7.0 2.1 190 chr2L 20310832 intergenic spir + chr2L 20310927 intergenic spir + chr2L 20311022 intergenic spir + chr2L_17_20310001 chr2L_20310001 RAL-306_125b 743 chr2L 20312530 20312566 chr2L 20312665 20312701 18 135 6.5 12.0 9.2 1.8 171 chr2L 20312530 intron spir + chr2L 20312616 intron spir + chr2L 20312701 intron spir + chr2L_18_20310001 chr2L_20310001 RAL-306_125b 744 chr2L 20372191 20372246 chr2L 20372482 20372537 pogo 11 289 2.0 10.5 6.2 1.5 346 chr2L 20372191 intergenic Ugt37a1 - chr2L 20372364 intergenic Ugt37a1 - chr2L 20372537 exon Ugt37a1 - chr2L_11_20370001 chr2L_20370001 RAL-306_125b 745 chr2L 20383418 20383449 chr2L 20383555 20383591 7 141 7.5 8.5 8.0 0.8 173 chr2L 20383418 intergenic not near genes chr2L 20383504 intergenic not near genes chr2L 20383591 intergenic not near genes chr2L_7_20380001 chr2L_20380001 RAL-306_125b 746 chr2L 20383452 20383469 chr2L 20383553 20383561 4 119 4.0 8.0 6.0 0.6 109 chr2L 20383452 intergenic not near genes chr2L 20383506 intergenic not near genes chr2L 20383561 intergenic not near genes chr2L_4_20380001 chr2L_20380001 RAL-306_125b 747 chr2L 20497980 20498056 chr2L 20498126 20498189 26 145 4.5 8.0 6.2 3.6 209 chr2L 20497980 intergenic not near genes chr2L 20498084 intergenic not near genes chr2L 20498189 intergenic not near genes chr2L_26_20495001 chr2L_20495001 RAL-306_125b 748 chr2L 20498641 20498707 chr2L 20498790 20498856 12 149 6.0 4.0 5.0 2.0 215 chr2L 20498641 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498856 intergenic not near genes chr2L_12_20495001 chr2L_20495001 RAL-306_125b 749 chr2L 20502964 20503026 chr2L 20508315 20508384 21 5353 30.0 44.0 37.0 0.6 5420 chr2L 20502964 intergenic not near genes chr2L 20505674 intergenic not near genes chr2L 20508384 intergenic not near genes chr2L_21_20505001 chr2L_20505001 RAL-306_125b 750 chr2L 20513554 20513581 chr2L 20513696 20513723 9 142 9.5 3.0 6.2 1.2 169 chr2L 20513554 intergenic CR45702 + chr2L 20513638 intergenic CR45702 + chr2L 20513723 intergenic CR45702 + chr2L_9_20510001 chr2L_20510001 RAL-306_125b 751 chr2L 20513590 20513598 chr2L 20513692 20513704 5 127 5.0 2.5 3.8 1.0 114 chr2L 20513590 intergenic CR45702 + chr2L 20513647 intergenic CR45702 + chr2L 20513704 intergenic CR45702 + chr2L_5_20510001 chr2L_20510001 RAL-306_125b 752 chr2L 20525802 20525828 chr2L 20525929 20525935 10 124 6.5 7.0 6.8 1.3 133 chr2L 20525802 intergenic not near genes chr2L 20525868 intergenic not near genes chr2L 20525935 intergenic not near genes chr2L_10_20525001 chr2L_20525001 RAL-306_125b 753 chr2L 20549083 20549154 chr2L 20549215 20549286 25 132 1.0 5.0 3.0 6.2 203 chr2L 20549083 intergenic not near genes chr2L 20549184 intergenic not near genes chr2L 20549286 intergenic not near genes chr2L_25_20545001 chr2L_20545001 RAL-306_125b 754 chr2L 20550584 20550608 chr2L 20550716 20550738 11 130 8.5 8.5 8.5 1.2 154 chr2L 20550584 intergenic not near genes chr2L 20550661 intergenic not near genes chr2L 20550738 intergenic not near genes chr2L_11_20550001 chr2L_20550001 RAL-306_125b 755 chr2L 20553142 20553180 chr2L 20553268 20553306 11 126 13.0 7.0 10.0 1.0 164 chr2L 20553142 intergenic not near genes chr2L 20553224 intergenic not near genes chr2L 20553306 intergenic not near genes chr2L_11_20550001 chr2L_20550001 RAL-306_125b 756 chr2L 20553182 20553204 chr2L 20553267 20553330 5 118 7.0 7.0 7.0 0.6 148 chr2L 20553182 intergenic not near genes chr2L 20553256 intergenic not near genes chr2L 20553330 intergenic not near genes chr2L_5_20550001 chr2L_20550001 RAL-306_125b 757 chr2L 20563513 20563558 chr2L 20563640 20563665 19 125 8.5 11.0 9.8 1.8 152 chr2L 20563513 intron CR45347 + chr2L 20563589 intron CR45347 + chr2L 20563665 intron CR45347 + chr2L_19_20560001 chr2L_20560001 RAL-306_125b 758 chr2L 20568615 20568686 chr2L 20569055 20569126 X-element 19 437 4.0 5.5 4.8 3.3 511 chr2L 20568615 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569126 intron CR45347 + chr2L_19_20565001 chr2L_20565001 RAL-306_125b 759 chr2L 20576181 20576240 chr2L 20583700 20583759 blood 17 7513 3.5 12.0 7.8 1.9 7578 chr2L 20576181 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583759 3` UTR CR44909 - chr2L_17_20575001 chr2L_20575001 RAL-306_125b 760 chr2L 20601744 20601815 chr2L 20601872 20601943 20 127 9.0 3.5 6.2 2.8 199 chr2L 20601744 intron CR44909 - chr2L 20601844 intron CR44909 - chr2L 20601943 intron CR44909 - chr2L_20_20600001 chr2L_20600001 RAL-306_125b 761 chr2L 20602670 20602744 chr2L 20602808 20602882 19 137 1.0 5.0 3.0 4.8 212 chr2L 20602670 intron CR44909 - chr2L 20602776 intron CR44909 - chr2L 20602882 intron CR44909 - chr2L_19_20600001 chr2L_20600001 RAL-306_125b 762 chr2L 20607636 20607663 chr2L 20607720 20607777 6 100 6.5 4.5 5.5 0.9 141 chr2L 20607636 intron,3` UTR CR44909 -,CR43608 - chr2L 20607706 intron,3` UTR CR44909 -,CR43608 - chr2L 20607777 intron,3` UTR CR44909 -,CR43608 - chr2L_6_20605001 chr2L_20605001 RAL-306_125b 763 chr2L 20637018 20637022 chr2L 23016847 23016851 NOF 4 2379829 23.0 14.0 18.5 0.2 2379833 chr2L 20637018 intergenic not near genes chr2L 21826934 intergenic not near genes chr2L 23016851 intron Cht3 - chr2L_4_21825001 chr2L_21825001 RAL-306_125b 764 chr2L 20639454 20639530 chr2L 20639780 20639855 INE-1 22 325 10.0 11.0 10.5 1.9 401 chr2L 20639454 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639855 intergenic CG31680 + chr2L_22_20635001 chr2L_20635001 RAL-306_125b 765 chr2L 20643294 20643338 chr2L 20643476 20643520 15 182 9.0 10.0 9.5 1.4 226 chr2L 20643294 intergenic CG17470 -,phr6-4 - chr2L 20643407 3` UTR phr6-4 - chr2L 20643520 3` UTR phr6-4 - chr2L_15_20640001 chr2L_20640001 RAL-306_125b 766 chr2L 20674787 20674864 chr2L 20674922 20674992 13 126 5.5 1.5 3.5 2.9 205 chr2L 20674787 intron CG31678 - chr2L 20674890 intron CG31678 - chr2L 20674992 intron CG31678 - chr2L_13_20670001 chr2L_20670001 RAL-306_125b 767 chr2L 20826470 20826540 chr2L 20826601 20826630 21 128 4.0 3.5 3.8 4.4 160 chr2L 20826470 intron CG9331 + chr2L 20826550 intron CG9331 + chr2L 20826630 intron CG9331 + chr2L_21_20825001 chr2L_20825001 RAL-306_125b 768 chr2L 20835765 20835834 chr2L 20836532 20836601 Quasimodo 22 767 8.0 7.5 7.8 2.5 836 chr2L 20835765 5` UTR Oseg5 - chr2L 20836183 intergenic Oseg5 -,Spn38F - chr2L 20836601 intergenic Spn38F - chr2L_22_20835001 chr2L_20835001 RAL-306_125b 769 chr2L 20839982 20840054 chr2L 20840244 20840316 24 258 4.5 9.0 6.8 3.1 334 chr2L 20839982 intergenic not near genes chr2L 20840149 intergenic not near genes chr2L 20840316 intergenic CG31676 + chr2L_24_20840001 chr2L_20840001 RAL-306_125b 770 chr2L 20846718 20846780 chr2L 20846852 20846914 21 133 11.0 6.5 8.8 2.1 196 chr2L 20846718 intron CG31676 + chr2L 20846816 intron CG31676 + chr2L 20846914 intron CG31676 + chr2L_21_20845001 chr2L_20845001 RAL-306_125b 771 chr2L 20862584 20862589 chr2L 20862731 20862736 5 147 0.0 21.5 10.8 0.4 152 chr2L 20862584 intergenic not near genes chr2L 20862660 intergenic not near genes chr2L 20862736 intergenic not near genes chr2L_5_20860001 chr2L_20860001 RAL-306_125b 772 chr2L 20891492 20891545 chr2L 20896641 20896696 jockey 17 5148 7.5 11.0 9.2 1.7 5204 chr2L 20891492 intron,intron CG43739 -,sky - chr2L 20894094 intron,intron CG43739 -,sky - chr2L 20896696 intron,intron CG43739 -,sky - chr2L_17_20890001 chr2L_20890001 RAL-306_125b 773 chr2L 20901430 20901477 chr2L 20902638 20902691 1360 5 1211 5.0 11.5 8.2 0.5 1261 chr2L 20901430 intron,intron CG43739 -,sky - chr2L 20902060 intron,intron CG43739 -,sky - chr2L 20902691 intron,intron CG43739 -,sky - chr2L_5_20900001 chr2L_20900001 RAL-306_125b 774 chr2L 20910986 20911010 chr2L 20911112 20911130 6 123 16.5 11.0 13.8 0.4 144 chr2L 20910986 intron,intron CG43739 -,sky - chr2L 20911058 intron,intron CG43739 -,sky - chr2L 20911130 intron,intron CG43739 -,sky - chr2L_6_20910001 chr2L_20910001 RAL-306_125b 775 chr2L 20911011 20911058 chr2L 20911111 20911169 17 119 9.0 10.5 9.8 1.6 158 chr2L 20911011 intron,intron CG43739 -,sky - chr2L 20911090 intron,intron CG43739 -,sky - chr2L 20911169 intron,intron CG43739 -,sky - chr2L_17_20910001 chr2L_20910001 RAL-306_125b 776 chr2L 20928875 20928906 chr2L 20929465 20929496 16 590 7.0 12.5 9.8 1.5 621 chr2L 20928875 intergenic not near genes chr2L 20929186 intergenic CG9270 - chr2L 20929496 3` UTR CG9270 - chr2L_16_20925001 chr2L_20925001 RAL-306_125b 777 chr2L 20946895 20946962 chr2L 20947032 20947099 26 134 7.5 5.5 6.5 3.5 204 chr2L 20946895 intergenic CR44606 - chr2L 20946997 intergenic CR44606 - chr2L 20947099 intergenic CR44606 - chr2L_26_20945001 chr2L_20945001 RAL-306_125b 778 chr2L 20967035 20967087 chr2L 20967170 20967223 22 136 5.5 7.5 6.5 2.9 188 chr2L 20967035 3` UTR CG42238 - chr2L 20967129 3` UTR CG42238 - chr2L 20967223 3` UTR CG42238 - chr2L_22_20965001 chr2L_20965001 RAL-306_125b 779 chr2L 20976614 20976659 chr2L 20981460 20981509 X-element 18 4862 10.0 8.0 9.0 1.8 4895 chr2L 20976614 intron CG42238 - chr2L 20979062 intron CG42238 - chr2L 20981509 intron CG42238 - chr2L_18_20975001 chr2L_20975001 RAL-306_125b 780 chr2L 20990991 20991055 chr2L 20991119 20991162 20 123 8.0 8.0 8.0 2.2 171 chr2L 20990991 intron CG42238 - chr2L 20991076 intron CG42238 - chr2L 20991162 intron CG42238 - chr2L_20_20990001 chr2L_20990001 RAL-306_125b 781 chr2L 21020240 21020309 chr2L 21023967 21023998 NOF 14 3720 5.5 6.0 5.8 2.1 3758 chr2L 21020240 intron CG42238 - chr2L 21022119 intron CG42238 - chr2L 21023998 intron CG42238 - chr2L_14_21020001 chr2L_21020001 RAL-306_125b 782 chr2L 21041096 21041158 chr2L 21049407 21049469 Tirant 22 8303 9.5 9.5 9.5 2.1 8373 chr2L 21041096 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049469 intron CG42238 - chr2L_22_21045001 chr2L_21045001 RAL-306_125b 783 chr2L 21074878 21074949 chr2L 21075019 21075090 20 141 7.5 7.0 7.2 2.4 212 chr2L 21074878 intergenic not near genes chr2L 21074984 intergenic tadr + chr2L 21075090 intergenic tadr + chr2L_20_21070001 chr2L_21070001 RAL-306_125b 784 chr2L 21086428 21086451 chr2L 21086572 21086610 9 160 10.0 13.5 11.8 0.7 182 chr2L 21086428 5` UTR CG33509 - chr2L 21086519 intergenic CG33509 -,ppk13 - chr2L 21086610 intergenic CG33509 -,ppk13 - chr2L_9_21085001 chr2L_21085001 RAL-306_125b 785 chr2L 21088877 21088946 chr2L 21089002 21089079 28 129 4.5 6.5 5.5 4.3 202 chr2L 21088877 intergenic ppk13 -,CG9259 + chr2L 21088978 intergenic ppk13 -,CG9259 + chr2L 21089079 intergenic CG9259 +,ppk13 - chr2L_28_21085001 chr2L_21085001 RAL-306_125b 786 chr2L 21245264 21245304 chr2L 21245519 21245565 14 274 0.0 5.0 2.5 4.0 301 chr2L 21245264 intron Hr39 + chr2L 21245414 intron Hr39 + chr2L 21245565 intron Hr39 + chr2L_14_21245001 chr2L_21245001 RAL-306_125b 787 chr2L 21246467 21246475 chr2L 21246612 21246620 4 145 22.0 9.5 15.8 0.2 153 chr2L 21246467 intron Hr39 + chr2L 21246544 intron Hr39 + chr2L 21246620 intron Hr39 + chr2L_4_21245001 chr2L_21245001 RAL-306_125b 788 chr2L 21246478 21246539 chr2L 21246607 21246684 19 138 10.5 7.5 9.0 1.9 206 chr2L 21246478 intron Hr39 + chr2L 21246581 intron Hr39 + chr2L 21246684 intron Hr39 + chr2L_19_21245001 chr2L_21245001 RAL-306_125b 789 chr2L 21286565 21286624 chr2L 21286693 21286753 23 128 10.5 10.0 10.2 2.1 188 chr2L 21286565 exon Mio - chr2L 21286659 intron Mio - chr2L 21286753 intron Mio - chr2L_23_21285001 chr2L_21285001 RAL-306_125b 790 chr2L 21307473 21307497 chr2L 21307605 21307629 4 132 34.0 31.5 32.8 0.1 156 chr2L 21307473 intron Mio - chr2L 21307551 intron Mio - chr2L 21307629 intron Mio - chr2L_4_21305001 chr2L_21305001 RAL-306_125b 791 chr2L 21347510 21347571 chr2L 21355032 21355093 blood 24 7521 10.0 7.5 8.8 2.4 7583 chr2L 21347510 intron Tsp39D + chr2L 21351302 intron Tsp39D + chr2L 21355093 intron Tsp39D + chr2L_24_21350001 chr2L_21350001 RAL-306_125b 792 chr2L 21355561 21355629 chr2L 21355756 21355824 27 193 8.0 8.5 8.2 2.9 263 chr2L 21355561 exon Tsp39D + chr2L 21355692 intron Tsp39D + chr2L 21355824 intron Tsp39D + chr2L_27_21355001 chr2L_21355001 RAL-306_125b 793 chr2L 21392166 21392227 chr2L 21392302 21392363 24 133 9.0 10.0 9.5 2.3 197 chr2L 21392166 3` UTR nrv3 + chr2L 21392264 3` UTR nrv3 + chr2L 21392363 3` UTR nrv3 + chr2L_24_21390001 chr2L_21390001 RAL-306_125b 794 chr2L 21596988 21597059 chr2L 21604782 21604853 roo 9 7790 12.0 8.5 10.2 0.8 7865 chr2L 21596988 intergenic not near genes chr2L 21600920 intergenic not near genes chr2L 21604853 intergenic not near genes chr2L_9_21600001 chr2L_21600001 RAL-306_125b 795 chr2L 21691796 21691802 chr2L 21698311 21698322 Burdock 5 6519 19.0 0.5 9.8 0.5 6526 chr2L 21691796 intron CG31619 + chr2L 21695059 intron CG31619 + chr2L 21698322 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-306_125b 796 chr2L 21750056 21750124 chr2L 21750426 21750497 15 366 11.0 6.0 8.5 1.6 441 chr2L 21750056 intron step - chr2L 21750276 intron step - chr2L 21750497 intron step - chr2L_15_21750001 chr2L_21750001 RAL-306_125b 797 chr2L 21754620 21754686 chr2L 21754751 21754817 27 131 9.0 10.5 9.8 2.5 197 chr2L 21754620 intron step - chr2L 21754718 intron step - chr2L 21754817 intron step - chr2L_27_21750001 chr2L_21750001 RAL-306_125b 798 chr2L 21771942 21771993 chr2L 21772071 21772122 18 128 14.0 9.0 11.5 1.4 180 chr2L 21771942 intron CG31612 - chr2L 21772032 intron CG31612 - chr2L 21772122 intron CG31612 - chr2L_18_21770001 chr2L_21770001 RAL-306_125b 799 chr2L 21772680 21772753 chr2L 21773330 21773403 20 649 3.5 3.0 3.2 4.8 723 chr2L 21772680 intron CG31612 - chr2L 21773042 exon CG31612 - chr2L 21773403 exon CG31612 - chr2L_20_21770001 chr2L_21770001 RAL-306_125b 800 chr2L 21798026 21798061 chr2L 21877527 21877562 13 79501 40.0 32.0 36.0 0.4 79536 chr2L 21798026 intergenic CR44269 - chr2L 21837794 intergenic not near genes chr2L 21877562 intergenic not near genes chr2L_13_21835001 chr2L_21835001 RAL-306_125b 801 chr2L 21819285 21819351 chr2L 21819416 21819489 21 133 11.5 6.0 8.8 2.1 204 chr2L 21819285 intergenic CR44786 + chr2L 21819387 intergenic CR44786 + chr2L 21819489 5` UTR CR44786 + chr2L_21_21815001 chr2L_21815001 RAL-306_125b 802 chr2L 21824109 21824147 chr2L 21824213 21824258 10 131 0.0 7.5 3.8 2.1 149 chr2L 21824109 intergenic not near genes chr2L 21824184 intergenic not near genes chr2L 21824258 intergenic not near genes chr2L_10_21820001 chr2L_21820001 RAL-306_125b 803 chr2L 21869042 21869090 chr2L 21869181 21869221 10 130 9.5 6.0 7.8 1.1 179 chr2L 21869042 5` UTR CR44917 + chr2L 21869132 5` UTR CR44917 + chr2L 21869221 5` UTR CR44917 + chr2L_10_21865001 chr2L_21865001 RAL-306_125b 804 chr2L 21869095 21869097 chr2L 21869179 21869236 4 115 9.0 5.5 7.2 0.5 141 chr2L 21869095 5` UTR CR44917 + chr2L 21869166 5` UTR CR44917 + chr2L 21869236 5` UTR CR44917 + chr2L_4_21865001 chr2L_21865001 RAL-306_125b 805 chr2L 21953796 21953866 chr2L 21954647 21954717 23 853 51.0 52.5 51.8 0.4 921 chr2L 21953796 intergenic not near genes chr2L 21954256 intergenic not near genes chr2L 21954717 intergenic not near genes chr2L_23_21950001 chr2L_21950001 RAL-306_125b 806 chr2L 21981646 21981711 chr2L 21990860 21990885 roo 22 9209 7.0 7.0 7.0 2.8 9239 chr2L 21981646 exon CG2528 - chr2L 21986266 intron CG2528 - chr2L 21990885 exon CG2528 - chr2L_22_21985001 chr2L_21985001 RAL-306_125b 807 chr2L 21996901 21996968 chr2L 21997032 21997099 24 131 5.5 8.5 7.0 3.0 198 chr2L 21996901 intergenic not near genes chr2L 21997000 intergenic not near genes chr2L 21997099 intergenic not near genes chr2L_24_21995001 chr2L_21995001 RAL-306_125b 808 chr2L 22001600 22001660 chr2L 22001726 22001786 23 125 10.0 7.5 8.8 2.3 186 chr2L 22001600 intergenic not near genes chr2L 22001693 intergenic not near genes chr2L 22001786 intergenic not near genes chr2L_23_22000001 chr2L_22000001 RAL-306_125b 809 chr2L 22007885 22007943 chr2L 22008017 22008075 15 129 7.0 5.0 6.0 2.1 190 chr2L 22007885 intergenic not near genes chr2L 22007980 intergenic not near genes chr2L 22008075 intergenic not near genes chr2L_15_22005001 chr2L_22005001 RAL-306_125b 810 chr2L 22025787 22025853 chr2L 22025905 22025982 19 124 6.5 10.0 8.2 2.1 195 chr2L 22025787 intergenic tio + chr2L 22025884 intergenic tio + chr2L 22025982 intergenic tio + chr2L_19_22025001 chr2L_22025001 RAL-306_125b 811 chr2L 22047217 22047257 chr2L 22047379 22047432 12 173 4.5 9.0 6.8 1.5 215 chr2L 22047217 intergenic not near genes chr2L 22047324 intergenic not near genes chr2L 22047432 intergenic not near genes chr2L_12_22045001 chr2L_22045001 RAL-306_125b 812 chr2L 22107332 22107348 chr2L 22107509 22107525 5 177 18.0 0.5 9.2 0.5 193 chr2L 22107332 intergenic CG10834 - chr2L 22107428 intergenic CG10834 - chr2L 22107525 intergenic CG10834 - chr2L_5_22105001 chr2L_22105001 RAL-306_125b 813 chr2L 22212095 22212111 chr2L 22212692 22212708 8 597 7.5 9.0 8.2 0.9 613 chr2L 22212095 intron Ir40a - chr2L 22212402 intron Ir40a - chr2L 22212708 intron Ir40a - chr2L_8_22210001 chr2L_22210001 RAL-306_125b 814 chr2L 22212112 22212163 chr2L 22212689 22212760 19 596 2.5 9.0 5.8 2.8 648 chr2L 22212112 intron Ir40a - chr2L 22212436 intron Ir40a - chr2L 22212760 exon Ir40a - chr2L_19_22210001 chr2L_22210001 RAL-306_125b 815 chr2L 22215863 22215927 chr2L 22215999 22216063 24 136 12.5 14.5 13.5 1.7 200 chr2L 22215863 intergenic not near genes chr2L 22215963 intergenic not near genes chr2L 22216063 intergenic not near genes chr2L_24_22215001 chr2L_22215001 RAL-306_125b 816 chr2L 22239398 22239451 chr2L 22239529 22239577 14 127 4.0 16.0 10.0 1.3 179 chr2L 22239398 intron CR43765 - chr2L 22239488 3` UTR CR43765 - chr2L 22239577 3` UTR CR43765 - chr2L_14_22235001 chr2L_22235001 RAL-306_125b 817 chr2L 22258572 22258642 chr2L 22260746 22260816 G6 19 2172 10.5 7.5 9.0 1.9 2244 chr2L 22258572 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260816 intergenic not near genes chr2L_19_22255001 chr2L_22255001 RAL-306_125b 818 chr2L 22294304 22294370 chr2L 22294442 22294508 26 138 6.0 3.0 4.5 4.7 204 chr2L 22294304 intergenic not near genes chr2L 22294406 intergenic not near genes chr2L 22294508 intergenic not near genes chr2L_26_22290001 chr2L_22290001 RAL-306_125b 819 chr2L 22296869 22296917 chr2L 22297046 22297094 12 177 7.0 10.0 8.5 1.3 225 chr2L 22296869 intergenic not near genes chr2L 22296982 intergenic not near genes chr2L 22297094 intergenic not near genes chr2L_12_22295001 chr2L_22295001 RAL-306_125b 820 chr2L 22548889 22548933 chr2L 22550137 22550208 1360 10 1270 0.5 8.5 4.5 1.8 1319 chr2L 22548889 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550208 intergenic CG17493 + chr2L_10_22545001 chr2L_22545001 RAL-306_125b 821 chr2L 22581929 22582002 chr2L 22583768 22583781 S-element 27 1835 9.0 10.0 9.5 2.6 1852 chr2L 22581929 intron CG17494 + chr2L 22582855 intron CG17494 + chr2L 22583781 intron CG17494 + chr2L_27_22580001 chr2L_22580001 RAL-306_125b 822 chr2L 22706770 22706809 chr2L 22706923 22706962 15 147 10.5 8.0 9.2 1.5 192 chr2L 22706770 intron CG40006 - chr2L 22706866 intron CG40006 - chr2L 22706962 intron CG40006 - chr2L_15_22705001 chr2L_22705001 RAL-306_125b 823 chr2L 22776377 22776444 chr2L 22778216 22778283 S-element 28 1839 7.0 8.0 7.5 3.3 1906 chr2L 22776377 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778283 intergenic not near genes chr2L_28_22775001 chr2L_22775001 RAL-306_125b 824 chr2L 23181352 23181395 chr2L 23181511 23181529 12 156 17.5 9.0 13.2 0.8 177 chr2L 23181352 intergenic not near genes chr2L 23181440 intergenic not near genes chr2L 23181529 intergenic not near genes chr2L_12_23180001 chr2L_23180001 RAL-306_125b 825 chr2R 469937 469973 chr2R 473210 473264 F-element 10 3286 3.5 5.0 4.2 1.9 3327 chr2R 469937 intergenic not near genes chr2R 471600 intergenic not near genes chr2R 473264 intergenic not near genes chr2R_10_470001 chr2R_470001 RAL-306_125b 826 chr2R 529329 529347 chr2R 537959 538021 Max-element 6 8660 7.0 5.0 6.0 0.9 8692 chr2R 529329 intron CG40378 + chr2R 533675 intron CG40378 + chr2R 538021 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-306_125b 827 chr2R 1082367 1082372 chr2R 1087133 1087158 Doc 7 4807 10.0 6.5 8.2 0.8 4791 chr2R 1082367 intron rl + chr2R 1084762 intron rl + chr2R 1087158 intron rl + chr2R_7_1080001 chr2R_1080001 RAL-306_125b 828 chr2R 1516564 1516603 chr2R 1521342 1521356 1731 48 4777 65.5 62.5 64.0 0.7 4792 chr2R 1516564 exon Maf1 - chr2R 1518960 intron Maf1 - chr2R 1521356 5` UTR Maf1 - chr2R_48_1515001 chr2R_1515001 RAL-306_125b 829 chr2R 1919585 1919639 chr2R 1920011 1920065 10 427 31.5 36.5 34.0 0.3 480 chr2R 1919585 intron CG17684 - chr2R 1919825 intron CG17684 - chr2R 1920065 intron CG17684 - chr2R_10_1915001 chr2R_1915001 RAL-306_125b 830 chr2R 2498945 2498961 chr2R 2508142 2508158 roo 11 9197 20.0 6.5 13.2 0.8 9213 chr2R 2498945 intron MFS17 - chr2R 2503552 intron MFS17 - chr2R 2508158 intron MFS17 - chr2R_11_2500001 chr2R_2500001 RAL-306_125b 831 chr2R 2498962 2499007 chr2R 2508132 2508204 roo 25 9195 10.0 5.5 7.8 2.8 9242 chr2R 2498962 intron MFS17 - chr2R 2503583 intron MFS17 - chr2R 2508204 intron MFS17 - chr2R_25_2500001 chr2R_2500001 RAL-306_125b 832 chr2R 2591495 2591508 chr2R 2594221 2594234 roo 4 2726 33.0 26.5 29.8 0.1 2739 chr2R 2591495 intergenic not near genes chr2R 2592864 intergenic not near genes chr2R 2594234 intergenic not near genes chr2R_4_2590001 chr2R_2590001 RAL-306_125b 833 chr2R 3144047 3144102 chr2R 3393375 3393430 Doc 15 249328 24.5 30.5 27.5 0.5 249383 chr2R 3144047 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393430 intergenic not near genes chr2R_15_3265001 chr2R_3265001 RAL-306_125b 834 chr2R 3532581 3532637 chr2R 3536074 3536130 Doc 12 3493 6.5 7.0 6.8 1.5 3549 chr2R 3532581 intergenic not near genes chr2R 3534356 intergenic not near genes chr2R 3536130 intergenic not near genes chr2R_12_3530001 chr2R_3530001 RAL-306_125b 835 chr2R 4265292 4265304 chr2R 4265425 4265437 4 133 38.5 35.5 37.0 0.1 145 chr2R 4265292 intergenic not near genes chr2R 4265364 intergenic not near genes chr2R 4265437 intergenic not near genes chr2R_4_4265001 chr2R_4265001 RAL-306_125b 836 chr2R 4580161 4580218 chr2R 4580837 4580890 17 675 8.0 6.5 7.2 2.1 729 chr2R 4580161 intergenic not near genes chr2R 4580526 intergenic not near genes chr2R 4580890 intergenic not near genes chr2R_17_4580001 chr2R_4580001 RAL-306_125b 837 chr2R 4604507 4604572 chr2R 4604636 4604702 20 124 11.0 9.5 10.2 1.8 195 chr2R 4604507 intron p120ctn + chr2R 4604604 intron p120ctn + chr2R 4604702 intron p120ctn + chr2R_20_4600001 chr2R_4600001 RAL-306_125b 838 chr2R 4622915 4622980 chr2R 4624124 4624183 1360 17 1205 6.5 7.5 7.0 2.1 1268 chr2R 4622915 intergenic CR44101 - chr2R 4623549 intergenic not near genes chr2R 4624183 intergenic not near genes chr2R_17_4620001 chr2R_4620001 RAL-306_125b 839 chr2R 4624599 4624670 chr2R 4626554 4626620 Bica 26 1953 7.0 8.5 7.8 3.0 2021 chr2R 4624599 intergenic not near genes chr2R 4625610 intergenic not near genes chr2R 4626620 intergenic not near genes chr2R_26_4625001 chr2R_4625001 RAL-306_125b 840 chr2R 4634157 4634167 chr2R 4634286 4634296 6 128 9.5 16.0 12.8 0.4 139 chr2R 4634157 intergenic not near genes chr2R 4634226 intergenic not near genes chr2R 4634296 intergenic not near genes chr2R_6_4630001 chr2R_4630001 RAL-306_125b 841 chr2R 4656738 4656754 chr2R 4656998 4657002 5 257 37.5 19.5 28.5 0.2 264 chr2R 4656738 intergenic not near genes chr2R 4656870 intergenic not near genes chr2R 4657002 intergenic not near genes chr2R_5_4655001 chr2R_4655001 RAL-306_125b 842 chr2R 4656760 4656803 chr2R 4656986 4657063 9 251 28.0 19.0 23.5 0.4 303 chr2R 4656760 intergenic not near genes chr2R 4656912 intergenic not near genes chr2R 4657063 intergenic not near genes chr2R_9_4655001 chr2R_4655001 RAL-306_125b 843 chr2R 4702458 4702502 chr2R 4702646 4702690 18 188 6.5 8.5 7.5 2.1 232 chr2R 4702458 intron Nipped-B - chr2R 4702574 intron Nipped-B - chr2R 4702690 intron Nipped-B - chr2R_18_4700001 chr2R_4700001 RAL-306_125b 844 chr2R 4942016 4942075 chr2R 4942185 4942242 11 174 4.5 11.5 8.0 1.2 226 chr2R 4942016 intron Ir41a + chr2R 4942129 intron Ir41a + chr2R 4942242 intron Ir41a + chr2R_11_4940001 chr2R_4940001 RAL-306_125b 845 chr2R 5075216 5075365 chr2R 5075757 5075831 20 529 1.0 7.0 4.0 4.0 615 chr2R 5075216 intergenic not near genes chr2R 5075524 intergenic not near genes chr2R 5075831 intergenic not near genes chr2R_20_5075001 chr2R_5075001 RAL-306_125b 846 chr2R 5080755 5080815 chr2R 5080891 5080956 15 137 4.0 11.5 7.8 1.7 201 chr2R 5080755 intergenic not near genes chr2R 5080856 intergenic not near genes chr2R 5080956 intergenic not near genes chr2R_15_5080001 chr2R_5080001 RAL-306_125b 847 chr2R 5237302 5237370 chr2R 5237434 5237447 15 122 2.0 0.0 1.0 7.5 145 chr2R 5237302 intron Nipped-A - chr2R 5237374 intron Nipped-A - chr2R 5237447 intron Nipped-A - chr2R_15_5235001 chr2R_5235001 RAL-306_125b 848 chr2R 5240189 5240231 chr2R 5240309 5240357 17 123 15.5 15.5 15.5 1.0 168 chr2R 5240189 intron Nipped-A - chr2R 5240273 intron Nipped-A - chr2R 5240357 intron Nipped-A - chr2R_17_5240001 chr2R_5240001 RAL-306_125b 849 chr2R 5299564 5299568 chr2R 5299992 5299996 4 428 17.0 8.0 12.5 0.3 432 chr2R 5299564 intergenic not near genes chr2R 5299780 intergenic not near genes chr2R 5299996 intergenic not near genes chr2R_4_5295001 chr2R_5295001 RAL-306_125b 850 chr2R 5417966 5417979 chr2R 5420648 5420661 Burdock 12 2681 18.5 11.0 14.8 0.8 2695 chr2R 5417966 intron laccase2 + chr2R 5419314 intron laccase2 + chr2R 5420661 intron laccase2 + chr2R_12_5415001 chr2R_5415001 RAL-306_125b 851 chr2R 5417981 5418022 chr2R 5420628 5420704 Burdock 18 2680 9.0 7.5 8.2 2.0 2723 chr2R 5417981 intron laccase2 + chr2R 5419342 intron laccase2 + chr2R 5420704 intron laccase2 + chr2R_18_5415001 chr2R_5415001 RAL-306_125b 852 chr2R 5472322 5472394 chr2R 5472466 5472538 16 140 8.0 9.0 8.5 1.7 216 chr2R 5472322 intron CG30440 - chr2R 5472430 intron CG30440 - chr2R 5472538 intron CG30440 - chr2R_16_5470001 chr2R_5470001 RAL-306_125b 853 chr2R 5475543 5475606 chr2R 5475687 5475750 29 144 0.5 4.0 2.2 9.1 207 chr2R 5475543 intron CG30440 - chr2R 5475646 intron CG30440 - chr2R 5475750 intron CG30440 - chr2R_29_5475001 chr2R_5475001 RAL-306_125b 854 chr2R 5503506 5503579 chr2R 5503636 5503709 16 128 7.5 5.0 6.2 2.2 203 chr2R 5503506 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503608 intron,3` UTR CG30438 +,TpnC4 - chr2R 5503709 intron,intron CG30438 +,TpnC4 - chr2R_16_5500001 chr2R_5500001 RAL-306_125b 855 chr2R 5509517 5509548 chr2R 5509662 5509694 7 146 5.0 11.0 8.0 0.8 177 chr2R 5509517 intron CG30438 + chr2R 5509606 intron CG30438 + chr2R 5509694 intron CG30438 + chr2R_7_5505001 chr2R_5505001 RAL-306_125b 856 chr2R 5543202 5543215 chr2R 5547336 5547349 invader1 6 4134 0.5 23.0 11.8 0.5 4147 chr2R 5543202 intron CG30438 + chr2R 5545276 intron CG30438 + chr2R 5547349 intron CG30438 + chr2R_6_5545001 chr2R_5545001 RAL-306_125b 857 chr2R 5581398 5581416 chr2R 5627657 5627675 5 46259 35.5 24.0 29.8 0.2 46277 chr2R 5581398 intergenic not near genes chr2R 5604536 intron Fis1 - chr2R 5627675 intergenic not near genes chr2R_5_5600001 chr2R_5600001 RAL-306_125b 858 chr2R 5621355 5621397 chr2R 5621485 5621527 13 123 7.0 8.0 7.5 1.5 172 chr2R 5621355 intergenic not near genes chr2R 5621441 intergenic not near genes chr2R 5621527 intergenic not near genes chr2R_13_5620001 chr2R_5620001 RAL-306_125b 859 chr2R 5649102 5649112 chr2R 5701472 5701482 7 52370 25.5 13.5 19.5 0.3 52380 chr2R 5649102 intron CG11665 - chr2R 5675292 intergenic not near genes chr2R 5701482 intergenic not near genes chr2R_7_5675001 chr2R_5675001 RAL-306_125b 860 chr2R 5660035 5660101 chr2R 5660169 5660234 30 133 10.5 7.5 9.0 3.0 199 chr2R 5660035 intron Not3 - chr2R 5660134 intron Not3 - chr2R 5660234 intron Not3 - chr2R_30_5660001 chr2R_5660001 RAL-306_125b 861 chr2R 5714405 5714476 chr2R 5714628 5714692 21 219 6.0 0.0 3.0 5.2 287 chr2R 5714405 intron ap - chr2R 5714548 intron ap - chr2R 5714692 intron ap - chr2R_21_5710001 chr2R_5710001 RAL-306_125b 862 chr2R 5742786 5742858 chr2R 5742915 5742987 21 118 4.0 8.5 6.2 2.9 201 chr2R 5742786 intergenic not near genes chr2R 5742886 intergenic not near genes chr2R 5742987 intergenic not near genes chr2R_21_5740001 chr2R_5740001 RAL-306_125b 863 chr2R 5750400 5750449 chr2R 5750542 5750591 20 139 13.0 5.5 9.2 2.0 191 chr2R 5750400 intergenic not near genes chr2R 5750496 intergenic not near genes chr2R 5750591 intergenic not near genes chr2R_20_5750001 chr2R_5750001 RAL-306_125b 864 chr2R 5772478 5772550 chr2R 5772622 5772694 16 138 5.0 6.5 5.8 2.4 216 chr2R 5772478 3` UTR Gp210 + chr2R 5772586 3` UTR Gp210 + chr2R 5772694 3` UTR Gp210 + chr2R_16_5770001 chr2R_5770001 RAL-306_125b 865 chr2R 5790422 5790492 chr2R 5790557 5790627 23 135 5.0 13.0 9.0 2.3 205 chr2R 5790422 intergenic not near genes chr2R 5790524 intergenic not near genes chr2R 5790627 intergenic not near genes chr2R_23_5790001 chr2R_5790001 RAL-306_125b 866 chr2R 5794185 5794254 chr2R 5794363 5794432 20 176 12.5 13.5 13.0 1.4 247 chr2R 5794185 intergenic not near genes chr2R 5794308 intergenic not near genes chr2R 5794432 intergenic not near genes chr2R_20_5790001 chr2R_5790001 RAL-306_125b 867 chr2R 5861257 5861316 chr2R 5861411 5861487 16 167 5.5 3.0 4.2 3.1 230 chr2R 5861257 intergenic dpr12 + chr2R 5861372 intergenic not near genes chr2R 5861487 intergenic not near genes chr2R_16_5860001 chr2R_5860001 RAL-306_125b 868 chr2R 5869232 5869296 chr2R 5874358 5874422 flea 22 5124 7.5 6.0 6.8 2.8 5190 chr2R 5869232 intergenic not near genes chr2R 5871827 intergenic not near genes chr2R 5874422 intergenic not near genes chr2R_22_5870001 chr2R_5870001 RAL-306_125b 869 chr2R 5878879 5878890 chr2R 5879009 5879020 9 129 12.0 10.0 11.0 0.8 141 chr2R 5878879 intergenic CG44438 - chr2R 5878950 intergenic CG44438 - chr2R 5879020 intergenic CG44438 - chr2R_9_5875001 chr2R_5875001 RAL-306_125b 870 chr2R 5878893 5878940 chr2R 5879007 5879050 16 125 7.5 10.0 8.8 1.6 157 chr2R 5878893 intergenic CG44438 - chr2R 5878972 intergenic CG44438 - chr2R 5879050 intergenic CG44438 - chr2R_16_5875001 chr2R_5875001 RAL-306_125b 871 chr2R 5885319 5885376 chr2R 5885498 5885545 16 178 3.5 5.5 4.5 2.9 226 chr2R 5885319 5` UTR CR44125 + chr2R 5885432 5` UTR CR44125 + chr2R 5885545 5` UTR CR44125 + chr2R_16_5885001 chr2R_5885001 RAL-306_125b 872 chr2R 5902163 5902190 chr2R 5909772 5909798 17.6 10 7609 7.0 19.5 13.2 0.7 7635 chr2R 5902163 intron CG43366 + chr2R 5905980 intron CG43366 + chr2R 5909798 intron CG43366 + chr2R_10_5905001 chr2R_5905001 RAL-306_125b 873 chr2R 5917751 5917802 chr2R 5917854 5917920 20 126 3.5 5.5 4.5 3.6 169 chr2R 5917751 intron CG43366 + chr2R 5917836 intron CG43366 + chr2R 5917920 intron CG43366 + chr2R_20_5915001 chr2R_5915001 RAL-306_125b 874 chr2R 5932760 5932812 chr2R 5932877 5932941 17 127 10.5 6.0 8.2 1.8 181 chr2R 5932760 intergenic not near genes chr2R 5932850 intergenic not near genes chr2R 5932941 intergenic not near genes chr2R_17_5930001 chr2R_5930001 RAL-306_125b 875 chr2R 5947024 5947083 chr2R 5947195 5947254 21 170 10.5 10.0 10.2 1.9 230 chr2R 5947024 intergenic not near genes chr2R 5947139 intergenic not near genes chr2R 5947254 intergenic not near genes chr2R_21_5945001 chr2R_5945001 RAL-306_125b 876 chr2R 5994411 5994454 chr2R 5994550 5994593 INE-1 8 139 9.5 8.0 8.8 0.8 182 chr2R 5994411 intron Src42A + chr2R 5994502 intron Src42A + chr2R 5994593 intron Src42A + chr2R_8_5990001 chr2R_5990001 RAL-306_125b 877 chr2R 6016630 6016683 chr2R 6016987 6017040 24 356 9.0 2.5 5.8 3.5 410 chr2R 6016630 intergenic not near genes chr2R 6016835 intergenic not near genes chr2R 6017040 intergenic not near genes chr2R_24_6015001 chr2R_6015001 RAL-306_125b 878 chr2R 6088323 6088384 chr2R 6088466 6088527 24 142 8.5 6.0 7.2 2.9 204 chr2R 6088323 intergenic not near genes chr2R 6088425 intergenic not near genes chr2R 6088527 intergenic not near genes chr2R_24_6085001 chr2R_6085001 RAL-306_125b 879 chr2R 6096685 6096739 chr2R 6101927 6101987 BS 9 5244 4.5 4.0 4.2 1.7 5302 chr2R 6096685 intron EcR - chr2R 6099336 intron EcR - chr2R 6101987 intron EcR - chr2R_9_6095001 chr2R_6095001 RAL-306_125b 880 chr2R 6126892 6126960 chr2R 6127050 6127118 25 157 9.5 7.5 8.5 2.6 226 chr2R 6126892 intron EcR - chr2R 6127005 intron EcR - chr2R 6127118 intron EcR - chr2R_25_6125001 chr2R_6125001 RAL-306_125b 881 chr2R 6178070 6178145 chr2R 6178246 6178272 36 173 4.5 4.0 4.2 6.9 202 chr2R 6178070 intergenic not near genes chr2R 6178171 intergenic not near genes chr2R 6178272 intergenic not near genes chr2R_36_6175001 chr2R_6175001 RAL-306_125b 882 chr2R 6194643 6194690 chr2R 6194776 6194823 16 131 9.0 11.5 10.2 1.4 180 chr2R 6194643 intron Ptr - chr2R 6194733 intron Ptr - chr2R 6194823 intron Ptr - chr2R_16_6190001 chr2R_6190001 RAL-306_125b 883 chr2R 3998870 3998876 chr2R 6486795 6486834 5 2487932 59.0 27.0 43.0 0.1 2487964 chr2R 3998870 intergenic not near genes chr2R 5242852 intron Nipped-A - chr2R 6486834 intergenic not near genes chr2R_5_5240001 chr2R_5240001 RAL-306_125b 884 chr2R 6494494 6494529 chr2R 6499306 6499341 F-element 9 4811 11.0 6.5 8.8 0.9 4847 chr2R 6494494 intergenic not near genes chr2R 6496918 intergenic not near genes chr2R 6499341 intergenic not near genes chr2R_9_6495001 chr2R_6495001 RAL-306_125b 885 chr2R 6494530 6494544 chr2R 6499303 6499356 F-element 7 4801 9.0 6.0 7.5 0.8 4826 chr2R 6494530 intergenic not near genes chr2R 6496943 intergenic not near genes chr2R 6499356 intergenic not near genes chr2R_7_6495001 chr2R_6495001 RAL-306_125b 886 chr2R 6546681 6546724 chr2R 6546832 6546875 13 151 12.0 3.0 7.5 1.5 194 chr2R 6546681 intron jing + chr2R 6546778 intron jing + chr2R 6546875 intron jing + chr2R_13_6545001 chr2R_6545001 RAL-306_125b 887 chr2R 6546726 6546750 chr2R 6546822 6546855 14 142 4.5 3.0 3.8 2.9 129 chr2R 6546726 intron jing + chr2R 6546790 intron jing + chr2R 6546855 intron jing + chr2R_14_6545001 chr2R_6545001 RAL-306_125b 888 chr2R 6562512 6562541 chr2R 6562642 6562663 6 132 6.5 5.0 5.8 0.9 151 chr2R 6562512 intron jing + chr2R 6562588 intron jing + chr2R 6562663 intron jing + chr2R_6_6560001 chr2R_6560001 RAL-306_125b 889 chr2R 6562551 6562573 chr2R 6562635 6562690 9 122 4.5 3.5 4.0 1.8 139 chr2R 6562551 intron jing + chr2R 6562620 intron jing + chr2R 6562690 intron jing + chr2R_9_6560001 chr2R_6560001 RAL-306_125b 890 chr2R 6579733 6579797 chr2R 6584869 6584933 flea 20 5136 10.0 8.5 9.2 2.0 5200 chr2R 6579733 intron jing + chr2R 6582333 intron jing + chr2R 6584933 intron jing + chr2R_20_6580001 chr2R_6580001 RAL-306_125b 891 chr2R 6611677 6611745 chr2R 6611867 6611935 33 188 8.5 6.5 7.5 3.9 258 chr2R 6611677 intron jing + chr2R 6611806 intron jing + chr2R 6611935 intron jing + chr2R_33_6610001 chr2R_6610001 RAL-306_125b 892 chr2R 6712542 6712600 chr2R 6712689 6712747 20 146 8.0 8.0 8.0 2.2 205 chr2R 6712542 intron,intron CG3409 -,CG45092 - chr2R 6712644 intron,intron CG3409 -,CG45092 - chr2R 6712747 intron,intron CG3409 -,CG45092 - chr2R_20_6710001 chr2R_6710001 RAL-306_125b 893 chr2R 6758958 6759025 chr2R 6759087 6759154 13 129 4.0 6.0 5.0 2.2 196 chr2R 6758958 intergenic CG9436 - chr2R 6759056 intergenic CG9436 - chr2R 6759154 intergenic CG9436 - chr2R_13_6755001 chr2R_6755001 RAL-306_125b 894 chr2R 6760429 6760500 chr2R 6760981 6761055 24 550 1.5 7.0 4.2 4.6 626 chr2R 6760429 3` UTR Epac - chr2R 6760742 3` UTR Epac - chr2R 6761055 3` UTR Epac - chr2R_24_6760001 chr2R_6760001 RAL-306_125b 895 chr2R 6786415 6786422 chr2R 6786619 6786626 4 204 9.5 20.5 15.0 0.2 211 chr2R 6786415 intron Epac - chr2R 6786520 intron Epac - chr2R 6786626 intron Epac - chr2R_4_6785001 chr2R_6785001 RAL-306_125b 896 chr2R 6798512 6798548 chr2R 6798648 6798684 14 136 14.0 8.5 11.2 1.1 172 chr2R 6798512 intron Epac - chr2R 6798598 intron Epac - chr2R 6798684 intron Epac - chr2R_14_6795001 chr2R_6795001 RAL-306_125b 897 chr2R 6798549 6798576 chr2R 6798643 6798712 7 130 8.5 7.5 8.0 0.8 163 chr2R 6798549 intron Epac - chr2R 6798630 intron Epac - chr2R 6798712 intron Epac - chr2R_7_6795001 chr2R_6795001 RAL-306_125b 898 chr2R 6842595 6842654 chr2R 6842899 6842946 17 302 9.0 5.5 7.2 2.1 351 chr2R 6842595 intergenic not near genes chr2R 6842770 intergenic not near genes chr2R 6842946 intergenic not near genes chr2R_17_6840001 chr2R_6840001 RAL-306_125b 899 chr2R 6876184 6876248 chr2R 6876306 6876380 24 130 7.0 5.0 6.0 3.4 196 chr2R 6876184 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876282 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876380 intron,intron CR44169 +,Spn42Da - chr2R_24_6875001 chr2R_6875001 RAL-306_125b 900 chr2R 6890623 6890678 chr2R 6890755 6890770 28 134 6.5 4.5 5.5 4.3 147 chr2R 6890623 intergenic not near genes chr2R 6890696 intergenic not near genes chr2R 6890770 intergenic not near genes chr2R_28_6890001 chr2R_6890001 RAL-306_125b 901 chr2R 6934499 6934519 chr2R 6934634 6934654 8 134 8.5 9.5 9.0 0.8 155 chr2R 6934499 intron mim - chr2R 6934576 intron mim - chr2R 6934654 intron mim - chr2R_8_6930001 chr2R_6930001 RAL-306_125b 902 chr2R 6936192 6936259 chr2R 6936324 6936384 21 131 5.5 6.0 5.8 3.1 192 chr2R 6936192 exon mim - chr2R 6936288 intron mim - chr2R 6936384 intron mim - chr2R_21_6935001 chr2R_6935001 RAL-306_125b 903 chr2R 6952120 6952184 chr2R 6959750 6959814 opus 34 7630 7.5 5.0 6.2 4.7 7694 chr2R 6952120 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955967 intron,intron mim -,CheB42c - chr2R 6959814 intron,intron mim -,CheB42c - chr2R_34_6955001 chr2R_6955001 RAL-306_125b 904 chr2R 6962406 6962475 chr2R 6962813 6962837 25 405 4.5 8.5 6.5 3.3 431 chr2R 6962406 intron,intron mim -,CheB42c - chr2R 6962622 intron,intron mim -,CheB42c - chr2R 6962837 intron,intron mim -,CheB42c - chr2R_25_6960001 chr2R_6960001 RAL-306_125b 905 chr2R 7029798 7029875 chr2R 7030156 7030233 18 353 7.0 4.5 5.8 2.6 435 chr2R 7029798 intron Tsp42Eg + chr2R 7030016 intron Tsp42Eg + chr2R 7030233 intron Tsp42Eg + chr2R_18_7030001 chr2R_7030001 RAL-306_125b 906 chr2R 7139863 7139947 chr2R 7141417 7141489 hopper2 5 1552 0.5 8.0 4.2 1.0 1626 chr2R 7139863 intergenic not near genes chr2R 7140676 intergenic not near genes chr2R 7141489 intergenic not near genes chr2R_5_7140001 chr2R_7140001 RAL-306_125b 907 chr2R 7153111 7153190 chr2R 7153247 7153326 23 135 6.5 10.0 8.2 2.5 215 chr2R 7153111 intron,exon pk +,Spn43Ab - chr2R 7153218 intron,intron pk +,Spn43Ab - chr2R 7153326 intron,intron pk +,Spn43Ab - chr2R_23_7150001 chr2R_7150001 RAL-306_125b 908 chr2R 7185476 7185542 chr2R 7185615 7185654 15 130 4.0 9.5 6.8 1.9 178 chr2R 7185476 intron pk + chr2R 7185565 intron pk + chr2R 7185654 intron pk + chr2R_15_7185001 chr2R_7185001 RAL-306_125b 909 chr2R 7196529 7196592 chr2R 7201354 7201409 F-element 20 4823 8.5 10.5 9.5 1.9 4880 chr2R 7196529 intron pk + chr2R 7198969 intron pk + chr2R 7201409 intron pk + chr2R_20_7195001 chr2R_7195001 RAL-306_125b 910 chr2R 7209848 7209872 chr2R 7217642 7217683 roo 10 7804 3.0 7.0 5.0 1.7 7835 chr2R 7209848 intron pk + chr2R 7213766 intron pk + chr2R 7217683 intron pk + chr2R_10_7210001 chr2R_7210001 RAL-306_125b 911 chr2R 7235782 7235838 chr2R 7240917 7240975 jockey 17 5140 7.5 2.0 4.8 2.9 5193 chr2R 7235782 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240975 intergenic not near genes chr2R_17_7235001 chr2R_7235001 RAL-306_125b 912 chr2R 7262156 7262208 chr2R 7269267 7269282 297 6 7103 8.5 12.0 10.2 0.5 7126 chr2R 7262156 intergenic not near genes chr2R 7265719 intergenic not near genes chr2R 7269282 intergenic not near genes chr2R_6_7265001 chr2R_7265001 RAL-306_125b 913 chr2R 7328079 7328147 chr2R 7328240 7328308 23 161 4.5 12.0 8.2 2.5 229 chr2R 7328079 intron,intron Dscam1 -,CR45129 + chr2R 7328194 intron,intron Dscam1 -,CR45129 + chr2R 7328308 intron,intron Dscam1 -,CR45129 + chr2R_23_7325001 chr2R_7325001 RAL-306_125b 914 chr2R 7417855 7418151 chr2R 7417991 7418280 40 130 15.5 9.0 12.2 3.0 425 chr2R 7417855 intergenic not near genes chr2R 7418068 intergenic not near genes chr2R 7418280 intergenic not near genes chr2R_40_7415001 chr2R_7415001 RAL-306_125b 915 chr2R 7434851 7434882 chr2R 7439202 7439233 Juan 5 4351 13.0 10.5 11.8 0.4 4382 chr2R 7434851 3` UTR so + chr2R 7437042 intergenic not near genes chr2R 7439233 intergenic not near genes chr2R_5_7435001 chr2R_7435001 RAL-306_125b 916 chr2R 7434883 7434907 chr2R 7439199 7439258 Juan 8 4343 11.5 9.5 10.5 0.7 4375 chr2R 7434883 intergenic so + chr2R 7437070 intergenic not near genes chr2R 7439258 intergenic not near genes chr2R_8_7435001 chr2R_7435001 RAL-306_125b 917 chr2R 7459236 7459263 chr2R 7459374 7459385 7 136 17.5 9.0 13.2 0.5 149 chr2R 7459236 intergenic Inos -,CG11141 - chr2R 7459310 intergenic CG11141 -,Inos - chr2R 7459385 intergenic CG11141 - chr2R_7_7455001 chr2R_7455001 RAL-306_125b 918 chr2R 7608372 7608433 chr2R 7613625 7613670 I-element 18 5251 9.5 0.0 4.8 3.1 5298 chr2R 7608372 intron CG1358 - chr2R 7611021 intron CG1358 - chr2R 7613670 intron CG1358 - chr2R_18_7610001 chr2R_7610001 RAL-306_125b 919 chr2R 7625094 7625161 chr2R 7625243 7625269 7 142 4.5 10.5 7.5 0.8 175 chr2R 7625094 intron CG43340 + chr2R 7625182 intron CG43340 + chr2R 7625269 intron CG43340 + chr2R_7_7625001 chr2R_7625001 RAL-306_125b 920 chr2R 7737860 7738156 chr2R 7737989 7738283 30 127 27.5 8.5 18.0 1.6 423 chr2R 7737860 intergenic not near genes chr2R 7738072 intergenic not near genes chr2R 7738283 intergenic not near genes chr2R_30_7735001 chr2R_7735001 RAL-306_125b 921 chr2R 7738160 7738195 chr2R 7738287 7738322 8 127 14.5 10.0 12.2 0.6 162 chr2R 7738160 intergenic not near genes chr2R 7738241 intergenic not near genes chr2R 7738322 intergenic not near genes chr2R_8_7735001 chr2R_7735001 RAL-306_125b 922 chr2R 7750763 7750808 chr2R 7750875 7750927 15 120 5.0 6.5 5.8 2.2 164 chr2R 7750763 intron,intron CG30497 -,CG45093 - chr2R 7750845 intron,intron CG30497 -,CG45093 - chr2R 7750927 intron,intron CG30497 -,CG45093 - chr2R_15_7750001 chr2R_7750001 RAL-306_125b 923 chr2R 7769690 7769759 chr2R 7769817 7769886 15 127 9.0 9.0 9.0 1.5 196 chr2R 7769690 intron,intron CG30497 -,CG45093 - chr2R 7769788 intron,intron CG30497 -,CG45093 - chr2R 7769886 intron,intron CG30497 -,CG45093 - chr2R_15_7765001 chr2R_7765001 RAL-306_125b 924 chr2R 7815638 7815688 chr2R 7822146 7822151 Burdock 18 6513 13.0 10.5 11.8 1.4 6513 chr2R 7815638 intergenic CG1882 + chr2R 7818894 intergenic not near genes chr2R 7822151 3` UTR cathD - chr2R_18_7815001 chr2R_7815001 RAL-306_125b 925 chr2R 7862181 7862246 chr2R 7867345 7867409 flea 9 5161 8.5 4.5 6.5 1.2 5228 chr2R 7862181 intron Dgk - chr2R 7864795 intron Dgk - chr2R 7867409 intron Dgk - chr2R_9_7860001 chr2R_7860001 RAL-306_125b 926 chr2R 7869151 7869213 chr2R 7873982 7874018 Doc 16 4831 10.0 11.5 10.8 1.4 4867 chr2R 7869151 intron Dgk - chr2R 7871584 intron Dgk - chr2R 7874018 intron Dgk - chr2R_16_7870001 chr2R_7870001 RAL-306_125b 927 chr2R 7901656 7901670 chr2R 7901876 7901884 5 219 12.0 9.0 10.5 0.4 228 chr2R 7901656 intron CG30377 + chr2R 7901770 intron CG30377 + chr2R 7901884 intron CG30377 + chr2R_5_7900001 chr2R_7900001 RAL-306_125b 928 chr2R 7901685 7901716 chr2R 7901854 7901881 7 188 5.5 5.5 5.5 1.1 196 chr2R 7901685 intron CG30377 + chr2R 7901783 intron CG30377 + chr2R 7901881 intron CG30377 + chr2R_7_7900001 chr2R_7900001 RAL-306_125b 929 chr2R 7915669 7915744 chr2R 7915811 7915885 26 142 5.0 5.5 5.2 4.2 216 chr2R 7915669 intron CG12159 - chr2R 7915777 intron CG12159 - chr2R 7915885 intron CG12159 - chr2R_26_7915001 chr2R_7915001 RAL-306_125b 930 chr2R 8014375 8014455 chr2R 8014510 8014590 25 133 6.0 9.0 7.5 2.9 215 chr2R 8014375 intergenic not near genes chr2R 8014482 intergenic not near genes chr2R 8014590 intergenic not near genes chr2R_25_8010001 chr2R_8010001 RAL-306_125b 931 chr2R 8015618 8015674 chr2R 8017681 8017730 16 2067 5.0 5.0 5.0 2.7 2112 chr2R 8015618 intergenic mir-4981 + chr2R 8016674 intergenic not near genes chr2R 8017730 intergenic not near genes chr2R_16_8015001 chr2R_8015001 RAL-306_125b 932 chr2R 8026763 8026833 chr2R 8026889 8026959 21 126 4.5 4.0 4.2 4.0 196 chr2R 8026763 intergenic CR45267 + chr2R 8026861 intergenic CR45267 + chr2R 8026959 intergenic CR45267 + chr2R_21_8025001 chr2R_8025001 RAL-306_125b 933 chr2R 8040997 8041043 chr2R 8041137 8041183 11 140 4.5 4.0 4.2 2.1 186 chr2R 8040997 intron Optix + chr2R 8041090 intron Optix + chr2R 8041183 intron Optix + chr2R_11_8040001 chr2R_8040001 RAL-306_125b 934 chr2R 8067018 8067054 chr2R 8067152 8067187 17 133 19.5 11.0 15.2 1.0 169 chr2R 8067018 intron CG17977 - chr2R 8067102 intron CG17977 - chr2R 8067187 exon CG17977 - chr2R_17_8065001 chr2R_8065001 RAL-306_125b 935 chr2R 8067056 8067090 chr2R 8067151 8067224 17 130 12.0 10.0 11.0 1.4 168 chr2R 8067056 intron CG17977 - chr2R 8067140 exon CG17977 - chr2R 8067224 exon CG17977 - chr2R_17_8065001 chr2R_8065001 RAL-306_125b 936 chr2R 8089208 8089279 chr2R 8089344 8089415 26 134 8.0 9.5 8.8 2.7 207 chr2R 8089208 exon sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089415 intergenic sut3 +,sut2 + chr2R_26_8085001 chr2R_8085001 RAL-306_125b 937 chr2R 8105898 8105910 chr2R 8106028 8106037 6 137 8.5 4.5 6.5 0.8 139 chr2R 8105898 5` UTR Cul4 - chr2R 8105968 intron Cul4 - chr2R 8106037 5` UTR Cul4 - chr2R_6_8105001 chr2R_8105001 RAL-306_125b 938 chr2R 8105919 8105962 chr2R 8106024 8106103 14 133 4.5 4.0 4.2 2.7 184 chr2R 8105919 5` UTR Cul4 - chr2R 8106011 intron Cul4 - chr2R 8106103 5` UTR Cul4 - chr2R_14_8105001 chr2R_8105001 RAL-306_125b 939 chr2R 8157850 8157911 chr2R 8157988 8158049 15 135 4.5 5.5 5.0 2.5 199 chr2R 8157850 5` UTR CR44068 + chr2R 8157950 5` UTR CR44068 + chr2R 8158049 5` UTR CR44068 + chr2R_15_8155001 chr2R_8155001 RAL-306_125b 940 chr2R 8203709 8203777 chr2R 8203851 8203915 26 141 3.5 11.0 7.2 3.2 206 chr2R 8203709 intron LRP1 + chr2R 8203812 intron LRP1 + chr2R 8203915 intron LRP1 + chr2R_26_8200001 chr2R_8200001 RAL-306_125b 941 chr2R 8235987 8236064 chr2R 8236118 8236147 16 126 6.5 5.5 6.0 2.3 160 chr2R 8235987 intergenic not near genes chr2R 8236067 intergenic not near genes chr2R 8236147 intergenic not near genes chr2R_16_8235001 chr2R_8235001 RAL-306_125b 942 chr2R 8277593 8277661 chr2R 8277738 8277806 11 138 5.0 6.0 5.5 1.7 213 chr2R 8277593 5` UTR CR44280 + chr2R 8277700 5` UTR CR44280 + chr2R 8277806 5` UTR CR44280 + chr2R_11_8275001 chr2R_8275001 RAL-306_125b 943 chr2R 8330827 8330832 chr2R 8331363 8331368 roo 5 536 14.5 9.5 12.0 0.4 541 chr2R 8330827 intron pdm3 + chr2R 8331098 intron pdm3 + chr2R 8331368 intron pdm3 + chr2R_5_8330001 chr2R_8330001 RAL-306_125b 944 chr2R 8330842 8330888 chr2R 8331356 8331424 roo 22 534 7.5 9.0 8.2 2.4 582 chr2R 8330842 intron pdm3 + chr2R 8331133 intron pdm3 + chr2R 8331424 intron pdm3 + chr2R_22_8330001 chr2R_8330001 RAL-306_125b 945 chr2R 8368157 8368211 chr2R 8368271 8368341 13 127 8.5 6.0 7.2 1.6 184 chr2R 8368157 intron pdm3 + chr2R 8368249 intron pdm3 + chr2R 8368341 intron pdm3 + chr2R_13_8365001 chr2R_8365001 RAL-306_125b 946 chr2R 8398170 8398236 chr2R 8403001 8403066 Doc 22 4824 5.0 5.5 5.2 3.5 4896 chr2R 8398170 intron CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403066 intron CG2121 - chr2R_22_8400001 chr2R_8400001 RAL-306_125b 947 chr2R 8483914 8483984 chr2R 8484040 8484110 32 126 5.5 10.0 7.8 3.6 196 chr2R 8483914 intron mtt - chr2R 8484012 intron mtt - chr2R 8484110 intron mtt - chr2R_32_8480001 chr2R_8480001 RAL-306_125b 948 chr2R 8488869 8488911 chr2R 8489004 8489046 8 132 12.0 9.5 10.8 0.7 177 chr2R 8488869 intron mtt - chr2R 8488958 intron mtt - chr2R 8489046 intron mtt - chr2R_8_8485001 chr2R_8485001 RAL-306_125b 949 chr2R 8488912 8488938 chr2R 8488996 8489073 8 126 9.0 8.0 8.5 0.8 161 chr2R 8488912 intron mtt - chr2R 8488992 intron mtt - chr2R 8489073 intron mtt - chr2R_8_8485001 chr2R_8485001 RAL-306_125b 950 chr2R 8489680 8489748 chr2R 8489809 8489877 22 128 9.5 8.0 8.8 2.2 197 chr2R 8489680 intron mtt - chr2R 8489778 intron mtt - chr2R 8489877 intron mtt - chr2R_22_8485001 chr2R_8485001 RAL-306_125b 951 chr2R 8490564 8490583 chr2R 8492339 8492358 Rt1c 6 1775 12.5 16.0 14.2 0.4 1794 chr2R 8490564 intron mtt - chr2R 8491461 intron mtt - chr2R 8492358 intron mtt - chr2R_6_8490001 chr2R_8490001 RAL-306_125b 952 chr2R 8508711 8508771 chr2R 8508843 8508904 12 130 7.0 1.5 4.2 2.3 193 chr2R 8508711 intron mtt - chr2R 8508808 intron mtt - chr2R 8508904 intron mtt - chr2R_12_8505001 chr2R_8505001 RAL-306_125b 953 chr2R 8566010 8566058 chr2R 8567006 8567054 1360 15 995 9.5 14.5 12.0 1.2 1044 chr2R 8566010 5` UTR Cyp6a14 - chr2R 8566532 5` UTR Cyp6a14 - chr2R 8567054 5` UTR Cyp6a14 - chr2R_15_8565001 chr2R_8565001 RAL-306_125b 954 chr2R 8612533 8612601 chr2R 8612660 8612728 30 127 12.0 12.0 12.0 2.3 195 chr2R 8612533 intron CG8642 - chr2R 8612630 intron CG8642 - chr2R 8612728 intron CG8642 - chr2R_30_8610001 chr2R_8610001 RAL-306_125b 955 chr2R 8722720 8722793 chr2R 8723006 8723084 pogo 20 283 4.0 7.5 5.8 2.9 364 chr2R 8722720 intron CG14767 - chr2R 8722902 intron CG14767 - chr2R 8723084 intron CG14767 - chr2R_20_8720001 chr2R_8720001 RAL-306_125b 956 chr2R 8764071 8764132 chr2R 8764270 8764315 14 197 3.5 12.0 7.8 1.6 244 chr2R 8764071 intergenic not near genes chr2R 8764193 intergenic not near genes chr2R 8764315 intergenic not near genes chr2R_14_8760001 chr2R_8760001 RAL-306_125b 957 chr2R 8777867 8777935 chr2R 8784108 8784176 diver 18 6241 5.5 11.5 8.5 1.9 6309 chr2R 8777867 intergenic not near genes chr2R 8781022 intergenic not near genes chr2R 8784176 intergenic not near genes chr2R_18_8780001 chr2R_8780001 RAL-306_125b 958 chr2R 8827715 8827780 chr2R 8827841 8827894 6 116 12.0 11.0 11.5 0.5 179 chr2R 8827715 intron,3` UTR sns +,CG30350 + chr2R 8827804 intron sns + chr2R 8827894 intron sns + chr2R_6_8825001 chr2R_8825001 RAL-306_125b 959 chr2R 8966117 8966177 chr2R 8966257 8966317 18 139 7.0 12.0 9.5 1.7 200 chr2R 8966117 intron CG8216 - chr2R 8966217 intron CG8216 - chr2R 8966317 intron CG8216 - chr2R_18_8965001 chr2R_8965001 RAL-306_125b 960 chr2R 8976151 8976218 chr2R 8976290 8976357 26 138 7.5 10.5 9.0 2.6 206 chr2R 8976151 intron CG8213 - chr2R 8976254 intron CG8213 - chr2R 8976357 intron CG8213 - chr2R_26_8975001 chr2R_8975001 RAL-306_125b 961 chr2R 9110100 9110164 chr2R 9110239 9110303 24 137 7.0 4.0 5.5 3.7 203 chr2R 9110100 intergenic Pmm45A - chr2R 9110202 intergenic Pmm45A - chr2R 9110303 intergenic tsu + chr2R_24_9110001 chr2R_9110001 RAL-306_125b 962 chr2R 9122792 9122857 chr2R 9122928 9122993 8 126 1.0 5.5 3.2 1.9 201 chr2R 9122792 exon GstE13 + chr2R 9122892 exon GstE13 + chr2R 9122993 exon GstE13 + chr2R_8_9120001 chr2R_9120001 RAL-306_125b 963 chr2R 9151261 9151325 chr2R 9157781 9157845 Burdock 24 6517 9.5 13.0 11.2 2.0 6584 chr2R 9151261 exon CG30345 + chr2R 9154553 intergenic not near genes chr2R 9157845 intergenic CG8008 - chr2R_24_9150001 chr2R_9150001 RAL-306_125b 964 chr2R 9212638 9212716 chr2R 9213179 9213227 roo 13 537 3.5 4.0 3.8 2.7 589 chr2R 9212638 intergenic CR45309 + chr2R 9212932 intergenic CR45309 + chr2R 9213227 5` UTR CR45309 + chr2R_13_9210001 chr2R_9210001 RAL-306_125b 965 chr2R 9230175 9230234 chr2R 9230305 9230364 13 128 3.0 4.5 3.8 2.7 189 chr2R 9230175 intron hig - chr2R 9230270 intron hig - chr2R 9230364 exon hig - chr2R_13_9230001 chr2R_9230001 RAL-306_125b 966 chr2R 9328869 9328944 chr2R 9329021 9329096 22 152 5.5 7.0 6.2 3.1 227 chr2R 9328869 intron,intron CG13739 -,CG13954 - chr2R 9328982 intron,intron CG13739 -,CG13954 - chr2R 9329096 intron,intron CG13739 -,CG13954 - chr2R_22_9325001 chr2R_9325001 RAL-306_125b 967 chr2R 9368079 9368127 chr2R 9368203 9368237 6 109 7.5 0.5 4.0 1.2 158 chr2R 9368079 intron CG13954 - chr2R 9368158 intron CG13954 - chr2R 9368237 intron CG13954 - chr2R_6_9365001 chr2R_9365001 RAL-306_125b 968 chr2R 9388612 9388676 chr2R 9388749 9388806 19 135 11.5 11.0 11.2 1.6 194 chr2R 9388612 5` UTR CG13954 - chr2R 9388709 5` UTR CG13954 - chr2R 9388806 5` UTR CG13954 - chr2R_19_9385001 chr2R_9385001 RAL-306_125b 969 chr2R 9407784 9407851 chr2R 9407926 9407989 12 140 10.0 12.0 11.0 1.0 205 chr2R 9407784 intron wun - chr2R 9407886 intron wun - chr2R 9407989 intron wun - chr2R_12_9405001 chr2R_9405001 RAL-306_125b 970 chr2R 9462845 9462913 chr2R 9462976 9463044 13 128 13.0 7.5 10.2 1.2 199 chr2R 9462845 intron Camta + chr2R 9462944 intron Camta + chr2R 9463044 intron Camta + chr2R_13_9460001 chr2R_9460001 RAL-306_125b 971 chr2R 9466624 9466687 chr2R 9466755 9466785 10 126 2.0 2.5 2.2 3.1 161 chr2R 9466624 intron Camta + chr2R 9466704 intron Camta + chr2R 9466785 intron Camta + chr2R_10_9465001 chr2R_9465001 RAL-306_125b 972 chr2R 9480040 9480092 chr2R 9490621 9490652 roo 15 10580 11.5 10.5 11.0 1.2 10612 chr2R 9480040 intergenic not near genes chr2R 9485346 intergenic not near genes chr2R 9490652 intergenic not near genes chr2R_15_9485001 chr2R_9485001 RAL-306_125b 973 chr2R 9509411 9509454 chr2R 9509527 9509532 6 118 5.0 9.5 7.2 0.7 121 chr2R 9509411 intron brp + chr2R 9509472 intron brp + chr2R 9509532 intron brp + chr2R_6_9505001 chr2R_9505001 RAL-306_125b 974 chr2R 9510616 9510696 chr2R 9510782 9510862 11 166 2.5 1.5 2.0 3.7 246 chr2R 9510616 exon brp + chr2R 9510739 intron brp + chr2R 9510862 exon brp + chr2R_11_9510001 chr2R_9510001 RAL-306_125b 975 chr2R 9529004 9529065 chr2R 9529136 9529197 25 131 10.0 10.5 10.2 2.2 193 chr2R 9529004 intron brp + chr2R 9529100 intron brp + chr2R 9529197 intron brp + chr2R_25_9525001 chr2R_9525001 RAL-306_125b 976 chr2R 9541575 9541653 chr2R 9541702 9541775 16 124 6.0 7.5 6.8 2.1 200 chr2R 9541575 intergenic brp +,CG1888 - chr2R 9541675 intergenic brp +,CG1888 - chr2R 9541775 intergenic CG1888 -,brp + chr2R_16_9540001 chr2R_9540001 RAL-306_125b 977 chr2R 9561791 9561842 chr2R 9561928 9561968 12 136 2.5 8.0 5.2 1.9 177 chr2R 9561791 3` UTR,intron CR45281 -,CG1809 + chr2R 9561880 3` UTR,intron CR45281 -,CG1809 + chr2R 9561968 3` UTR,intron CR45281 -,CG1809 + chr2R_12_9560001 chr2R_9560001 RAL-306_125b 978 chr2R 9726577 9726636 chr2R 9734178 9734237 17.6 19 7600 7.0 9.0 8.0 2.1 7660 chr2R 9726577 intron sqa - chr2R 9730407 intron sqa - chr2R 9734237 intron sqa - chr2R_19_9730001 chr2R_9730001 RAL-306_125b 979 chr2R 9805400 9805437 chr2R 9805531 9805568 11 131 6.0 13.5 9.8 1.0 168 chr2R 9805400 intron CG1688 - chr2R 9805484 intron CG1688 - chr2R 9805568 intron CG1688 - chr2R_11_9805001 chr2R_9805001 RAL-306_125b 980 chr2R 9869893 9869966 chr2R 9870048 9870076 23 151 19.0 13.5 16.2 1.3 183 chr2R 9869893 intron cbx - chr2R 9869984 intron cbx - chr2R 9870076 intron cbx - chr2R_23_9865001 chr2R_9865001 RAL-306_125b 981 chr2R 9870999 9871073 chr2R 9871535 9871608 roo 48 533 10.5 12.5 11.5 3.8 609 chr2R 9870999 intron cbx - chr2R 9871304 intron cbx - chr2R 9871608 intron,5` UTR cbx -,CG18446 + chr2R_48_9870001 chr2R_9870001 RAL-306_125b 982 chr2R 9945399 9945461 chr2R 9945644 9945707 BS 27 243 4.0 5.5 4.8 4.7 308 chr2R 9945399 intron Mef2 - chr2R 9945553 intron Mef2 - chr2R 9945707 intron Mef2 - chr2R_27_9945001 chr2R_9945001 RAL-306_125b 983 chr2R 9950268 9950324 chr2R 9950379 9950451 24 124 8.0 10.0 9.0 2.4 183 chr2R 9950268 intron Mef2 - chr2R 9950360 intron Mef2 - chr2R 9950451 intron Mef2 - chr2R_24_9950001 chr2R_9950001 RAL-306_125b 984 chr2R 10005805 10005831 chr2R 10007020 10007043 1360 9 1211 16.5 4.5 10.5 0.8 1238 chr2R 10005805 intron Pka-R2 - chr2R 10006424 intron Pka-R2 - chr2R 10007043 intron Pka-R2 - chr2R_9_10005001 chr2R_10005001 RAL-306_125b 985 chr2R 10005832 10005877 chr2R 10007018 10007072 1360 11 1204 7.0 4.5 5.8 1.6 1240 chr2R 10005832 intron Pka-R2 - chr2R 10006452 intron Pka-R2 - chr2R 10007072 intron Pka-R2 - chr2R_11_10005001 chr2R_10005001 RAL-306_125b 986 chr2R 10047786 10047821 chr2R 10047918 10047954 10 133 8.5 14.5 11.5 0.8 168 chr2R 10047786 intron oys - chr2R 10047870 intron oys - chr2R 10047954 intron oys - chr2R_10_10045001 chr2R_10045001 RAL-306_125b 987 chr2R 10053475 10053549 chr2R 10053628 10053702 32 153 6.5 7.0 6.8 4.1 227 chr2R 10053475 intron magu + chr2R 10053588 intron magu + chr2R 10053702 intron magu + chr2R_32_10050001 chr2R_10050001 RAL-306_125b 988 chr2R 10132142 10132214 chr2R 10132273 10132344 16 128 3.0 7.5 5.2 2.6 202 chr2R 10132142 exon gem + chr2R 10132243 intron gem + chr2R 10132344 exon gem + chr2R_16_10130001 chr2R_10130001 RAL-306_125b 989 chr2R 10133456 10133525 chr2R 10133577 10133653 27 126 10.5 8.5 9.5 2.6 197 chr2R 10133456 intron gem + chr2R 10133554 intron gem + chr2R 10133653 intron gem + chr2R_27_10130001 chr2R_10130001 RAL-306_125b 990 chr2R 10168328 10168365 chr2R 10168455 10168492 10 126 6.5 13.0 9.8 0.9 164 chr2R 10168328 intron KCNQ - chr2R 10168410 intron KCNQ - chr2R 10168492 intron KCNQ - chr2R_10_10165001 chr2R_10165001 RAL-306_125b 991 chr2R 10171074 10171135 chr2R 10171208 10171269 22 133 1.0 10.5 5.8 3.2 195 chr2R 10171074 intron KCNQ - chr2R 10171172 intron KCNQ - chr2R 10171269 intron KCNQ - chr2R_22_10170001 chr2R_10170001 RAL-306_125b 992 chr2R 10172589 10172666 chr2R 10172750 10172829 19 162 8.5 0.0 4.2 3.7 240 chr2R 10172589 intron KCNQ - chr2R 10172709 intron KCNQ - chr2R 10172829 intron KCNQ - chr2R_19_10170001 chr2R_10170001 RAL-306_125b 993 chr2R 10176842 10176903 chr2R 10186062 10186123 roo 22 9219 7.0 12.0 9.5 2.1 9281 chr2R 10176842 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186123 intron KCNQ - chr2R_22_10180001 chr2R_10180001 RAL-306_125b 994 chr2R 10189162 10189228 chr2R 10189290 10189356 49 127 23.5 20.5 22.0 2.1 194 chr2R 10189162 intron KCNQ - chr2R 10189259 intron KCNQ - chr2R 10189356 intron KCNQ - chr2R_49_10185001 chr2R_10185001 RAL-306_125b 995 chr2R 10190396 10190452 chr2R 10190525 10190547 11 122 23.0 9.5 16.2 0.6 151 chr2R 10190396 intron KCNQ - chr2R 10190472 intron KCNQ - chr2R 10190547 intron KCNQ - chr2R_11_10190001 chr2R_10190001 RAL-306_125b 996 chr2R 10187553 10187565 chr2R 10190539 10190551 8 2986 37.0 12.5 24.8 0.3 2998 chr2R 10187553 intron KCNQ - chr2R 10189052 intron KCNQ - chr2R 10190551 intron KCNQ - chr2R_8_10185001 chr2R_10185001 RAL-306_125b 997 chr2R 10203595 10203656 chr2R 10203730 10203791 20 134 12.0 6.5 9.2 2.0 196 chr2R 10203595 intergenic not near genes chr2R 10203693 intergenic not near genes chr2R 10203791 intergenic not near genes chr2R_20_10200001 chr2R_10200001 RAL-306_125b 998 chr2R 10216139 10216206 chr2R 10216267 10216328 16 125 9.0 6.0 7.5 1.9 189 chr2R 10216139 intron,intron CG12912 -,Hr46 - chr2R 10216234 intron,intron CG12912 -,Hr46 - chr2R 10216328 intron,intron CG12912 -,Hr46 - chr2R_16_10215001 chr2R_10215001 RAL-306_125b 999 chr2R 10225707 10225749 chr2R 10225839 10225881 14 132 2.5 8.5 5.5 2.2 174 chr2R 10225707 intron,intron CG12912 -,Hr46 - chr2R 10225794 intron,intron CG12912 -,Hr46 - chr2R 10225881 intron,intron CG12912 -,Hr46 - chr2R_14_10225001 chr2R_10225001 RAL-306_125b 1000 chr2R 10229443 10229512 chr2R 10230054 10230124 19 610 18.0 20.0 19.0 0.9 681 chr2R 10229443 intron,intron CG12912 -,Hr46 - chr2R 10229784 intron,intron CG12912 -,Hr46 - chr2R 10230124 intron,intron CG12912 -,Hr46 - chr2R_19_10225001 chr2R_10225001 RAL-306_125b 1001 chr2R 10266460 10266519 chr2R 10266597 10266660 7 125 8.0 4.5 6.2 1.0 200 chr2R 10266460 intron CG12910 + chr2R 10266560 intron CG12910 + chr2R 10266660 intron CG12910 + chr2R_7_10265001 chr2R_10265001 RAL-306_125b 1002 chr2R 10274777 10274821 chr2R 10274903 10274906 13 123 9.5 0.0 4.8 2.2 129 chr2R 10274777 intron CAP + chr2R 10274842 intron CAP + chr2R 10274906 intron CAP + chr2R_13_10270001 chr2R_10270001 RAL-306_125b 1003 chr2R 10300605 10300679 chr2R 10300742 10300825 8 145 0.0 1.0 0.5 5.3 220 chr2R 10300605 intron CAP + chr2R 10300715 intron CAP + chr2R 10300825 intron CAP + chr2R_8_10300001 chr2R_10300001 RAL-306_125b 1004 chr2R 10313290 10313298 chr2R 10313428 10313436 6 138 10.5 11.0 10.8 0.5 146 chr2R 10313290 intergenic not near genes chr2R 10313363 intergenic not near genes chr2R 10313436 intergenic Ndg + chr2R_6_10310001 chr2R_10310001 RAL-306_125b 1005 chr2R 10313299 10313341 chr2R 10313421 10313479 22 136 6.5 11.0 8.8 2.2 180 chr2R 10313299 intergenic not near genes chr2R 10313389 intergenic not near genes chr2R 10313479 intergenic Ndg + chr2R_22_10310001 chr2R_10310001 RAL-306_125b 1006 chr2R 10319665 10319741 chr2R 10319807 10319883 21 139 7.5 8.5 8.0 2.3 218 chr2R 10319665 exon Ndg + chr2R 10319774 intron Ndg + chr2R 10319883 exon,3` UTR Ndg +,CG34222 - chr2R_21_10315001 chr2R_10315001 RAL-306_125b 1007 chr2R 10368938 10368997 chr2R 10369066 10369110 20 131 7.5 4.0 5.8 2.9 172 chr2R 10368938 intron CG42732 - chr2R 10369024 intron CG42732 - chr2R 10369110 intron CG42732 - chr2R_20_10365001 chr2R_10365001 RAL-306_125b 1008 chr2R 10372675 10372683 chr2R 10372787 10372815 6 124 7.0 6.0 6.5 0.8 140 chr2R 10372675 intron CG42732 - chr2R 10372745 intron CG42732 - chr2R 10372815 intron CG42732 - chr2R_6_10370001 chr2R_10370001 RAL-306_125b 1009 chr2R 10376686 10376700 chr2R 10376863 10376872 5 177 0.0 2.0 1.0 2.5 186 chr2R 10376686 intron CG42732 - chr2R 10376779 intron CG42732 - chr2R 10376872 intron CG42732 - chr2R_5_10375001 chr2R_10375001 RAL-306_125b 1010 chr2R 10409012 10409083 chr2R 10409139 10409209 19 126 0.0 6.5 3.2 4.5 197 chr2R 10409012 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409209 intron,exon CG42732 -,CG33477 - chr2R_19_10405001 chr2R_10405001 RAL-306_125b 1011 chr2R 10411759 10411822 chr2R 10411891 10411954 17 130 7.5 4.5 6.0 2.4 195 chr2R 10411759 intron CG42732 - chr2R 10411856 intron CG42732 - chr2R 10411954 intron CG42732 - chr2R_17_10410001 chr2R_10410001 RAL-306_125b 1012 chr2R 10477128 10477144 chr2R 10477518 10477534 7 390 7.0 1.0 4.0 1.4 406 chr2R 10477128 intron whd - chr2R 10477331 intron whd - chr2R 10477534 intron whd - chr2R_7_10475001 chr2R_10475001 RAL-306_125b 1013 chr2R 10477159 10477190 chr2R 10477503 10477596 4 374 4.0 2.5 3.2 1.0 437 chr2R 10477159 intron whd - chr2R 10477378 intron whd - chr2R 10477596 intron whd - chr2R_4_10475001 chr2R_10475001 RAL-306_125b 1014 chr2R 10517466 10517511 chr2R 10517604 10517649 22 135 16.0 11.5 13.8 1.5 183 chr2R 10517466 intron lola - chr2R 10517558 intron lola - chr2R 10517649 intron lola - chr2R_22_10515001 chr2R_10515001 RAL-306_125b 1015 chr2R 10517513 10517536 chr2R 10517601 10517674 13 134 13.5 10.5 12.0 1.0 161 chr2R 10517513 intron lola - chr2R 10517594 intron lola - chr2R 10517674 intron lola - chr2R_13_10515001 chr2R_10515001 RAL-306_125b 1016 chr2R 10548083 10548113 chr2R 10548209 10548239 9 121 12.0 9.5 10.8 0.8 156 chr2R 10548083 intergenic not near genes chr2R 10548161 intergenic not near genes chr2R 10548239 intergenic not near genes chr2R_9_10545001 chr2R_10545001 RAL-306_125b 1017 chr2R 10562943 10562983 chr2R 10563067 10563110 12 127 6.0 0.5 3.2 2.9 167 chr2R 10562943 intron psq + chr2R 10563026 intron psq + chr2R 10563110 intron psq + chr2R_12_10560001 chr2R_10560001 RAL-306_125b 1018 chr2R 10563228 10563522 chr2R 10563368 10563652 8 139 18.0 10.5 14.2 0.5 424 chr2R 10563228 intron psq + chr2R 10563440 intron psq + chr2R 10563652 intron psq + chr2R_8_10560001 chr2R_10560001 RAL-306_125b 1019 chr2R 10563550 10563578 chr2R 10563639 10563703 12 125 8.5 7.0 7.8 1.4 153 chr2R 10563550 intron psq + chr2R 10563626 intron psq + chr2R 10563703 intron psq + chr2R_12_10560001 chr2R_10560001 RAL-306_125b 1020 chr2R 10563907 10563920 chr2R 10564148 10564161 5 241 0.0 9.0 4.5 0.9 254 chr2R 10563907 intron psq + chr2R 10564034 intron psq + chr2R 10564161 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-306_125b 1021 chr2R 10571569 10571654 chr2R 10571701 10571781 4 131 2.0 2.0 2.0 1.3 212 chr2R 10571569 intron psq + chr2R 10571675 intron psq + chr2R 10571781 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-306_125b 1022 chr2R 10574588 10574630 chr2R 10574720 10574761 12 132 14.0 13.0 13.5 0.8 173 chr2R 10574588 intron psq + chr2R 10574674 intron psq + chr2R 10574761 intron psq + chr2R_12_10570001 chr2R_10570001 RAL-306_125b 1023 chr2R 10622307 10622381 chr2R 10637121 10637144 mdg1 9 14808 10.0 8.0 9.0 0.9 14837 chr2R 10622307 intron CG11883 + chr2R 10629726 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_9_10625001 chr2R_10625001 RAL-306_125b 1024 chr2R 10644009 10644078 chr2R 10644137 10644181 20 127 5.5 0.5 3.0 5.0 172 chr2R 10644009 intron Git - chr2R 10644095 intron Git - chr2R 10644181 intron Git - chr2R_20_10640001 chr2R_10640001 RAL-306_125b 1025 chr2R 10668031 10668080 chr2R 10668148 10668191 4 120 8.0 7.5 7.8 0.5 160 chr2R 10668031 intergenic not near genes chr2R 10668111 intergenic not near genes chr2R 10668191 intergenic not near genes chr2R_4_10665001 chr2R_10665001 RAL-306_125b 1026 chr2R 10675337 10675412 chr2R 10675462 10675543 11 129 0.5 1.0 0.8 6.1 206 chr2R 10675337 intron stan + chr2R 10675440 intron stan + chr2R 10675543 intron stan + chr2R_11_10675001 chr2R_10675001 RAL-306_125b 1027 chr2R 10750035 10750105 chr2R 10750165 10750235 16 126 9.5 7.0 8.2 1.7 200 chr2R 10750035 intron CG33144 - chr2R 10750135 intron CG33144 - chr2R 10750235 intron CG33144 - chr2R_16_10750001 chr2R_10750001 RAL-306_125b 1028 chr2R 10778343 10778392 chr2R 10778454 10778516 9 128 9.5 9.0 9.2 0.9 173 chr2R 10778343 intron CG33144 - chr2R 10778430 intron CG33144 - chr2R 10778516 intron CG33144 - chr2R_9_10775001 chr2R_10775001 RAL-306_125b 1029 chr2R 10790099 10790159 chr2R 10790237 10790297 22 137 9.0 6.5 7.8 2.5 198 chr2R 10790099 intron CG33144 - chr2R 10790198 intron CG33144 - chr2R 10790297 intron CG33144 - chr2R_22_10790001 chr2R_10790001 RAL-306_125b 1030 chr2R 10959040 10959101 chr2R 10959169 10959205 27 127 0.5 8.0 4.2 5.2 165 chr2R 10959040 intergenic not near genes chr2R 10959122 intergenic not near genes chr2R 10959205 intergenic not near genes chr2R_27_10955001 chr2R_10955001 RAL-306_125b 1031 chr2R 10979650 10979683 chr2R 10980144 10980201 297 10 513 6.0 8.5 7.2 1.2 551 chr2R 10979650 intergenic not near genes chr2R 10979926 intergenic not near genes chr2R 10980201 intergenic not near genes chr2R_10_10975001 chr2R_10975001 RAL-306_125b 1032 chr2R 11009774 11009839 chr2R 11018998 11019015 roo 20 9219 10.5 12.5 11.5 1.6 9241 chr2R 11009774 intron luna - chr2R 11014394 intron luna - chr2R 11019015 intron luna - chr2R_20_11010001 chr2R_11010001 RAL-306_125b 1033 chr2R 11019837 11019860 chr2R 11024953 11024976 jockey 11 5113 11.0 4.0 7.5 1.3 5139 chr2R 11019837 intron luna - chr2R 11022406 intron luna - chr2R 11024976 intron luna - chr2R_11_11020001 chr2R_11020001 RAL-306_125b 1034 chr2R 11019861 11019895 chr2R 11024952 11025011 jockey 11 5103 6.5 4.0 5.2 1.8 5150 chr2R 11019861 intron luna - chr2R 11022436 intron luna - chr2R 11025011 intron luna - chr2R_11_11020001 chr2R_11020001 RAL-306_125b 1035 chr2R 11083393 11083467 chr2R 11083611 11083664 37 211 3.5 9.5 6.5 4.9 271 chr2R 11083393 intron luna - chr2R 11083528 intron luna - chr2R 11083664 intron luna - chr2R_37_11080001 chr2R_11080001 RAL-306_125b 1036 chr2R 11129412 11129480 chr2R 11132016 11132089 26 2606 55.5 60.0 57.8 0.4 2677 chr2R 11129412 intergenic not near genes chr2R 11130750 intergenic not near genes chr2R 11132089 intergenic not near genes chr2R_26_11130001 chr2R_11130001 RAL-306_125b 1037 chr2R 11134083 11134134 chr2R 11134370 11134421 pogo 10 287 6.0 10.5 8.2 1.1 338 chr2R 11134083 intergenic not near genes chr2R 11134252 intergenic not near genes chr2R 11134421 intergenic not near genes chr2R_10_11130001 chr2R_11130001 RAL-306_125b 1038 chr2R 11154151 11154201 chr2R 11154320 11154371 7 169 7.0 7.0 7.0 0.9 220 chr2R 11154151 intron CG13229 - chr2R 11154261 intron CG13229 - chr2R 11154371 intron CG13229 - chr2R_7_11150001 chr2R_11150001 RAL-306_125b 1039 chr2R 11161612 11161652 chr2R 11161802 11161842 12 190 6.5 6.5 6.5 1.6 230 chr2R 11161612 intron,intron CG13229 -,shn + chr2R 11161727 intron,intron CG13229 -,shn + chr2R 11161842 intron,intron CG13229 -,shn + chr2R_12_11160001 chr2R_11160001 RAL-306_125b 1040 chr2R 11207782 11207837 chr2R 11208025 11208080 BS 18 242 12.5 12.0 12.2 1.4 298 chr2R 11207782 intron shn + chr2R 11207931 intron shn + chr2R 11208080 intron shn + chr2R_18_11205001 chr2R_11205001 RAL-306_125b 1041 chr2R 11249129 11249201 chr2R 11249305 11249377 24 171 0.0 6.5 3.2 5.7 248 chr2R 11249129 intergenic CG43112 + chr2R 11249253 intergenic CG43112 + chr2R 11249377 intergenic CG43112 + chr2R_24_11245001 chr2R_11245001 RAL-306_125b 1042 chr2R 11250046 11250105 chr2R 11250254 11250313 10 208 8.0 4.5 6.2 1.4 267 chr2R 11250046 intergenic CG43112 +,Or47a + chr2R 11250180 intergenic Or47a +,CG43112 + chr2R 11250313 intergenic Or47a +,CG43112 + chr2R_10_11250001 chr2R_11250001 RAL-306_125b 1043 chr2R 11297599 11297636 chr2R 11301973 11302010 flea 18 4373 10.5 0.0 5.2 2.9 4411 chr2R 11297599 intergenic CG42336 - chr2R 11299804 intergenic not near genes chr2R 11302010 5` UTR CG7741 + chr2R_18_11295001 chr2R_11295001 RAL-306_125b 1044 chr2R 11344105 11344156 chr2R 11344251 11344302 19 143 2.0 6.0 4.0 3.8 197 chr2R 11344105 intergenic alphaTry - chr2R 11344204 intergenic alphaTry - chr2R 11344302 3` UTR alphaTry - chr2R_19_11340001 chr2R_11340001 RAL-306_125b 1045 chr2R 11367979 11368041 chr2R 11368105 11368167 20 125 9.5 8.5 9.0 2.0 188 chr2R 11367979 intron CG13204 + chr2R 11368073 intron CG13204 + chr2R 11368167 intron CG13204 + chr2R_20_11365001 chr2R_11365001 RAL-306_125b 1046 chr2R 11404753 11404795 chr2R 11404890 11404931 6 137 8.0 11.5 9.8 0.6 178 chr2R 11404753 intergenic not near genes chr2R 11404842 intergenic not near genes chr2R 11404931 intergenic not near genes chr2R_6_11400001 chr2R_11400001 RAL-306_125b 1047 chr2R 11412960 11412999 chr2R 11413093 11413129 6 132 4.5 13.0 8.8 0.6 169 chr2R 11412960 exon Drip - chr2R 11413044 intron Drip - chr2R 11413129 intron Drip - chr2R_6_11410001 chr2R_11410001 RAL-306_125b 1048 chr2R 11415489 11415540 chr2R 11418678 11418739 opus 23 3196 0.5 8.5 4.5 4.2 3250 chr2R 11415489 intron Drip - chr2R 11417114 intron Drip - chr2R 11418739 intron Drip - chr2R_23_11415001 chr2R_11415001 RAL-306_125b 1049 chr2R 11425654 11425685 chr2R 11425766 11425815 9 124 1.0 8.0 4.5 1.6 161 chr2R 11425654 intron Drip - chr2R 11425734 intron Drip - chr2R 11425815 intron Drip - chr2R_9_11425001 chr2R_11425001 RAL-306_125b 1050 chr2R 11436608 11436847 chr2R 11436764 11436973 13 137 1.5 3.5 2.5 3.7 365 chr2R 11436608 intron CG7777 + chr2R 11436790 intron CG7777 + chr2R 11436973 intron CG7777 + chr2R_13_11435001 chr2R_11435001 RAL-306_125b 1051 chr2R 11445580 11445584 chr2R 11445709 11445713 5 129 11.0 16.0 13.5 0.3 133 chr2R 11445580 intron qvr + chr2R 11445646 intron qvr + chr2R 11445713 intron qvr + chr2R_5_11445001 chr2R_11445001 RAL-306_125b 1052 chr2R 11472605 11472676 chr2R 11473852 11473910 pogo 19 1245 5.0 8.0 6.5 2.5 1305 chr2R 11472605 intergenic not near genes chr2R 11473258 intergenic not near genes chr2R 11473910 intergenic not near genes chr2R_19_11470001 chr2R_11470001 RAL-306_125b 1053 chr2R 11485062 11485133 chr2R 11485194 11485263 9 131 4.5 4.5 4.5 1.6 201 chr2R 11485062 intron inv + chr2R 11485162 intron inv + chr2R 11485263 intron inv + chr2R_9_11485001 chr2R_11485001 RAL-306_125b 1054 chr2R 11498766 11498808 chr2R 11498950 11498981 4 181 0.0 15.5 7.8 0.5 215 chr2R 11498766 intron inv + chr2R 11498874 intron inv + chr2R 11498981 intron inv + chr2R_4_11495001 chr2R_11495001 RAL-306_125b 1055 chr2R 11539923 11539960 chr2R 11540311 11540348 14 386 18.0 12.0 15.0 0.9 425 chr2R 11539923 intergenic not near genes chr2R 11540136 intergenic not near genes chr2R 11540348 intergenic not near genes chr2R_14_11540001 chr2R_11540001 RAL-306_125b 1056 chr2R 11631325 11631412 chr2R 11631476 11631542 21 133 0.0 7.0 3.5 4.7 217 chr2R 11631325 intron CG9005 - chr2R 11631434 intron CG9005 - chr2R 11631542 intron CG9005 - chr2R_21_11630001 chr2R_11630001 RAL-306_125b 1057 chr2R 11637277 11637295 chr2R 11637404 11637422 7 125 16.5 6.5 11.5 0.6 145 chr2R 11637277 intron CG9005 - chr2R 11637350 intron CG9005 - chr2R 11637422 intron CG9005 - chr2R_7_11635001 chr2R_11635001 RAL-306_125b 1058 chr2R 11637296 11637327 chr2R 11637403 11637435 7 121 8.0 6.0 7.0 0.9 139 chr2R 11637296 intron CG9005 - chr2R 11637366 intron CG9005 - chr2R 11637435 intron CG9005 - chr2R_7_11635001 chr2R_11635001 RAL-306_125b 1059 chr2R 11677829 11677897 chr2R 11677957 11678025 23 127 4.5 8.0 6.2 3.2 196 chr2R 11677829 intron,exon Roc2 -,Tret1-2 + chr2R 11677927 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11678025 intron Roc2 - chr2R_23_11675001 chr2R_11675001 RAL-306_125b 1060 chr2R 11928644 11928708 chr2R 11928772 11928836 11 126 0.0 7.0 3.5 2.4 192 chr2R 11928644 intergenic not near genes chr2R 11928740 intergenic not near genes chr2R 11928836 intergenic CR44312 - chr2R_11_11925001 chr2R_11925001 RAL-306_125b 1061 chr2R 11955329 11955378 chr2R 11955458 11955507 13 129 9.0 0.0 4.5 2.4 178 chr2R 11955329 intron CG13188 + chr2R 11955418 intron CG13188 + chr2R 11955507 intron CG13188 + chr2R_13_11955001 chr2R_11955001 RAL-306_125b 1062 chr2R 12093906 12093980 chr2R 12094069 12094144 19 163 9.5 4.5 7.0 2.4 238 chr2R 12093906 intron jeb - chr2R 12094025 intron jeb - chr2R 12094144 intron jeb - chr2R_19_12090001 chr2R_12090001 RAL-306_125b 1063 chr2R 12105198 12105218 chr2R 12105333 12105353 5 134 0.0 11.0 5.5 0.8 155 chr2R 12105198 intron jeb - chr2R 12105276 intron jeb - chr2R 12105353 intron jeb - chr2R_5_12105001 chr2R_12105001 RAL-306_125b 1064 chr2R 12115690 12115865 chr2R 12115830 12115961 21 138 0.5 0.0 0.2 17.5 271 chr2R 12115690 intron jeb - chr2R 12115826 intron jeb - chr2R 12115961 intron jeb - chr2R_21_12115001 chr2R_12115001 RAL-306_125b 1065 chr2R 12120372 12120430 chr2R 12120489 12120562 9 122 3.0 4.5 3.8 1.9 190 chr2R 12120372 intergenic not near genes chr2R 12120467 intergenic not near genes chr2R 12120562 intergenic not near genes chr2R_9_12120001 chr2R_12120001 RAL-306_125b 1066 chr2R 12124792 12124856 chr2R 12124916 12124990 29 131 4.5 5.0 4.8 5.0 198 chr2R 12124792 intergenic not near genes chr2R 12124891 intergenic not near genes chr2R 12124990 intergenic not near genes chr2R_29_12120001 chr2R_12120001 RAL-306_125b 1067 chr2R 12185956 12185978 chr2R 12186101 12186123 16 144 39.5 17.0 28.2 0.5 167 chr2R 12185956 intron Cyp6g1 + chr2R 12186040 intron Cyp6g1 + chr2R 12186123 intron Cyp6g1 + chr2R_16_12185001 chr2R_12185001 RAL-306_125b 1068 chr2R 12185981 12186030 chr2R 12186099 12186175 37 141 18.5 16.0 17.2 2.0 194 chr2R 12185981 intron Cyp6g1 + chr2R 12186078 intron Cyp6g1 + chr2R 12186175 intron Cyp6g1 + chr2R_37_12185001 chr2R_12185001 RAL-306_125b 1069 chr2R 12185229 12185264 chr2R 12188104 12188140 11 2876 34.5 169.0 101.8 0.1 2911 chr2R 12185229 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188140 3` UTR Cyp6g1 + chr2R_11_12185001 chr2R_12185001 RAL-306_125b 1070 chr2R 12189385 12189409 chr2R 12189628 12189637 5 240 89.0 84.0 86.5 0.1 252 chr2R 12189385 exon Cyp6g2 - chr2R 12189511 exon Cyp6g2 - chr2R 12189637 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-306_125b 1071 chr2R 12187483 12187498 chr2R 12190049 12190064 8 2568 72.0 95.5 83.8 0.1 2581 chr2R 12187483 exon Cyp6g1 + chr2R 12188774 exon Cyp6g2 - chr2R 12190064 exon Cyp6g2 - chr2R_8_12185001 chr2R_12185001 RAL-306_125b 1072 chr2R 12187474 12187556 chr2R 12190065 12190122 56 2577 98.5 90.0 94.2 0.6 2648 chr2R 12187474 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_56_12185001 chr2R_12185001 RAL-306_125b 1073 chr2R 12236181 12236237 chr2R 12236321 12236378 10 139 8.5 3.5 6.0 1.4 197 chr2R 12236181 intergenic not near genes chr2R 12236280 intergenic not near genes chr2R 12236378 intergenic not near genes chr2R_10_12235001 chr2R_12235001 RAL-306_125b 1074 chr2R 12255671 12255715 chr2R 12255840 12255884 15 169 10.5 8.0 9.2 1.5 213 chr2R 12255671 3` UTR CG13168 + chr2R 12255778 intergenic CG13168 + chr2R 12255884 intergenic CG13168 + chr2R_15_12255001 chr2R_12255001 RAL-306_125b 1075 chr2R 12255724 12255745 chr2R 12255837 12255914 10 163 6.0 7.0 6.5 1.3 190 chr2R 12255724 intergenic CG13168 + chr2R 12255819 intergenic CG13168 + chr2R 12255914 intergenic CG13168 + chr2R_10_12255001 chr2R_12255001 RAL-306_125b 1076 chr2R 12285340 12285378 chr2R 12285487 12285525 10 147 14.0 1.0 7.5 1.2 185 chr2R 12285340 intron CG42700 + chr2R 12285432 intron CG42700 + chr2R 12285525 intron CG42700 + chr2R_10_12285001 chr2R_12285001 RAL-306_125b 1077 chr2R 12301478 12301556 chr2R 12301787 12301839 11 307 4.5 10.5 7.5 1.3 361 chr2R 12301478 intron CG8850 - chr2R 12301658 intron CG8850 - chr2R 12301839 intron CG8850 - chr2R_11_12300001 chr2R_12300001 RAL-306_125b 1078 chr2R 12363350 12363418 chr2R 12363821 12363892 22 480 6.5 0.5 3.5 4.9 542 chr2R 12363350 intergenic CG30043 + chr2R 12363621 intergenic CG30043 + chr2R 12363892 intergenic not near genes chr2R_22_12360001 chr2R_12360001 RAL-306_125b 1079 chr2R 12529858 12529935 chr2R 12530001 12530078 17 143 7.5 3.5 5.5 2.6 220 chr2R 12529858 intron fra + chr2R 12529968 intron fra + chr2R 12530078 intron fra + chr2R_17_12525001 chr2R_12525001 RAL-306_125b 1080 chr2R 12548471 12548551 chr2R 12548598 12548678 20 127 3.0 7.0 5.0 3.3 207 chr2R 12548471 intron fra + chr2R 12548574 intron fra + chr2R 12548678 intron fra + chr2R_20_12545001 chr2R_12545001 RAL-306_125b 1081 chr2R 12565543 12565595 chr2R 12565976 12566028 17 433 0.0 6.0 3.0 4.2 485 chr2R 12565543 intergenic not near genes chr2R 12565786 intergenic Cyp301a1 + chr2R 12566028 intergenic Cyp301a1 + chr2R_17_12565001 chr2R_12565001 RAL-306_125b 1082 chr2R 12607678 12607753 chr2R 12607845 12607924 14 171 5.0 2.5 3.8 2.9 246 chr2R 12607678 exon Amph + chr2R 12607801 intron Amph + chr2R 12607924 exon Amph + chr2R_14_12605001 chr2R_12605001 RAL-306_125b 1083 chr2R 12670320 12670402 chr2R 12670477 12670561 15 157 5.5 0.0 2.8 3.9 241 chr2R 12670320 intergenic nemy -,CG42708 - chr2R 12670440 intergenic CG42708 -,nemy - chr2R 12670561 3` UTR CG42708 - chr2R_15_12670001 chr2R_12670001 RAL-306_125b 1084 chr2R 12706381 12706443 chr2R 12706518 12706585 19 139 9.0 8.5 8.8 1.9 204 chr2R 12706381 intron CG42663 + chr2R 12706483 intron CG42663 + chr2R 12706585 intron CG42663 + chr2R_19_12705001 chr2R_12705001 RAL-306_125b 1085 chr2R 12707472 12707549 chr2R 12715883 12715965 roo 16 8416 3.5 4.5 4.0 3.2 8493 chr2R 12707472 intron CG42663 + chr2R 12711718 intron CG42663 + chr2R 12715965 intron CG42663 + chr2R_16_12710001 chr2R_12710001 RAL-306_125b 1086 chr2R 12723060 12723073 chr2R 12723189 12723202 6 129 1.5 0.0 0.8 3.3 142 chr2R 12723060 intron CG42663 + chr2R 12723131 intron CG42663 + chr2R 12723202 intron CG42663 + chr2R_6_12720001 chr2R_12720001 RAL-306_125b 1087 chr2R 12728859 12728899 chr2R 12728974 12729047 8 143 0.0 4.5 2.2 2.5 188 chr2R 12728859 intron CG42663 + chr2R 12728953 intron CG42663 + chr2R 12729047 intron CG42663 + chr2R_8_12725001 chr2R_12725001 RAL-306_125b 1088 chr2R 12774206 12774273 chr2R 12774341 12774422 6 142 6.0 0.5 3.2 1.4 216 chr2R 12774206 intergenic not near genes chr2R 12774314 intergenic not near genes chr2R 12774422 intergenic not near genes chr2R_6_12770001 chr2R_12770001 RAL-306_125b 1089 chr2R 12777752 12777824 chr2R 12777907 12777983 9 155 1.0 7.5 4.2 1.7 231 chr2R 12777752 5` UTR CR45266 + chr2R 12777868 5` UTR CR45266 + chr2R 12777983 5` UTR CR45266 + chr2R_9_12775001 chr2R_12775001 RAL-306_125b 1090 chr2R 12789250 12789321 chr2R 12797662 12797734 roo 18 8406 6.0 6.0 6.0 2.6 8484 chr2R 12789250 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797734 intron,3` UTR sca +,CR45137 - chr2R_18_12790001 chr2R_12790001 RAL-306_125b 1091 chr2R 12819162 12819181 chr2R 12819332 12819351 7 170 2.5 8.5 5.5 1.1 189 chr2R 12819162 intergenic not near genes chr2R 12819256 intergenic not near genes chr2R 12819351 intergenic not near genes chr2R_7_12815001 chr2R_12815001 RAL-306_125b 1092 chr2R 12819406 12819472 chr2R 12824525 12824591 jockey 15 5116 3.5 3.5 3.5 3.3 5185 chr2R 12819406 intergenic not near genes chr2R 12821998 intergenic not near genes chr2R 12824591 intergenic not near genes chr2R_15_12820001 chr2R_12820001 RAL-306_125b 1093 chr2R 12836340 12836417 chr2R 12836477 12836553 28 136 7.5 8.0 7.8 3.2 213 chr2R 12836340 intergenic not near genes chr2R 12836446 intergenic not near genes chr2R 12836553 intergenic not near genes chr2R_28_12835001 chr2R_12835001 RAL-306_125b 1094 chr2R 12845370 12845438 chr2R 12845496 12845544 16 126 5.5 2.5 4.0 3.2 174 chr2R 12845370 intergenic CG17575 - chr2R 12845457 intergenic CG17575 - chr2R 12845544 3` UTR CG17575 - chr2R_16_12845001 chr2R_12845001 RAL-306_125b 1095 chr2R 12856963 12856979 chr2R 12868317 12868333 accord 4 11354 19.0 13.5 16.2 0.2 11370 chr2R 12856963 intron CG17574 - chr2R 12862648 intron CG17574 - chr2R 12868333 intron,intron CG17574 -,CR45140 + chr2R_4_12860001 chr2R_12860001 RAL-306_125b 1096 chr2R 12897415 12897482 chr2R 12897556 12897623 8 141 6.5 1.5 4.0 1.6 208 chr2R 12897415 intron vg + chr2R 12897519 intron vg + chr2R 12897623 intron vg + chr2R_8_12895001 chr2R_12895001 RAL-306_125b 1097 chr2R 12915771 12915843 chr2R 12915916 12915988 24 144 5.0 6.0 5.5 3.7 217 chr2R 12915771 intergenic NAT1 + chr2R 12915880 intergenic NAT1 + chr2R 12915988 intergenic NAT1 + chr2R_24_12915001 chr2R_12915001 RAL-306_125b 1098 chr2R 13027693 13027733 chr2R 13027822 13027862 15 128 10.5 1.5 6.0 2.1 169 chr2R 13027693 intergenic not near genes chr2R 13027778 intergenic not near genes chr2R 13027862 intergenic not near genes chr2R_15_13025001 chr2R_13025001 RAL-306_125b 1099 chr2R 13034615 13034691 chr2R 13034774 13034850 7 159 0.0 3.0 1.5 2.8 235 chr2R 13034615 intergenic not near genes chr2R 13034732 intergenic not near genes chr2R 13034850 intergenic not near genes chr2R_7_13030001 chr2R_13030001 RAL-306_125b 1100 chr2R 13043000 13043040 chr2R 13043147 13043187 7 147 20.5 5.0 12.8 0.5 187 chr2R 13043000 intergenic not near genes chr2R 13043094 intergenic not near genes chr2R 13043187 intergenic not near genes chr2R_7_13040001 chr2R_13040001 RAL-306_125b 1101 chr2R 13129145 13129210 chr2R 13129273 13129338 24 127 5.5 1.0 3.2 5.7 193 chr2R 13129145 intergenic CG3955 -,CG13326 - chr2R 13129242 intergenic CG3955 -,CG13326 - chr2R 13129338 intergenic CG13326 -,CG3955 - chr2R_24_13125001 chr2R_13125001 RAL-306_125b 1102 chr2R 13167387 13167461 chr2R 13167531 13167611 13 147 7.0 0.0 3.5 2.9 224 chr2R 13167387 intron GLaz - chr2R 13167499 intron GLaz - chr2R 13167611 intron GLaz - chr2R_13_13165001 chr2R_13165001 RAL-306_125b 1103 chr2R 13194804 13194854 chr2R 13194951 13194984 7 139 5.0 5.5 5.2 1.1 180 chr2R 13194804 intergenic not near genes chr2R 13194894 intergenic not near genes chr2R 13194984 intergenic not near genes chr2R_7_13190001 chr2R_13190001 RAL-306_125b 1104 chr2R 13220492 13220547 chr2R 13220620 13220696 17 133 0.0 9.0 4.5 3.1 204 chr2R 13220492 intron CG17059 + chr2R 13220594 intron CG17059 + chr2R 13220696 intron CG17059 + chr2R_17_13220001 chr2R_13220001 RAL-306_125b 1105 chr2R 13261106 13261172 chr2R 13261251 13261317 18 145 0.0 8.0 4.0 3.6 211 chr2R 13261106 intron CG42319 + chr2R 13261212 intron CG42319 + chr2R 13261317 intron CG42319 + chr2R_18_13260001 chr2R_13260001 RAL-306_125b 1106 chr2R 13364657 13364731 chr2R 13364793 13364867 24 134 3.0 4.0 3.5 5.3 210 chr2R 13364657 intergenic not near genes chr2R 13364762 intergenic not near genes chr2R 13364867 intergenic not near genes chr2R_24_13360001 chr2R_13360001 RAL-306_125b 1107 chr2R 13376612 13376639 chr2R 13376772 13376799 13 155 4.5 4.5 4.5 2.4 187 chr2R 13376612 intron CG10814 - chr2R 13376706 intron CG10814 - chr2R 13376799 exon CG10814 - chr2R_13_13375001 chr2R_13375001 RAL-306_125b 1108 chr2R 13403872 13403938 chr2R 13404007 13404073 18 135 0.0 0.0 0.0 18.0 201 chr2R 13403872 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404073 intergenic not near genes chr2R_18_13400001 chr2R_13400001 RAL-306_125b 1109 chr2R 13404853 13404861 chr2R 13404988 13404996 5 134 13.5 13.0 13.2 0.4 143 chr2R 13404853 intergenic not near genes chr2R 13404924 intergenic not near genes chr2R 13404996 intergenic not near genes chr2R_5_13400001 chr2R_13400001 RAL-306_125b 1110 chr2R 13404867 13404902 chr2R 13404976 13405022 9 120 9.5 10.0 9.8 0.8 155 chr2R 13404867 intergenic not near genes chr2R 13404944 intergenic not near genes chr2R 13405022 intergenic not near genes chr2R_9_13400001 chr2R_13400001 RAL-306_125b 1111 chr2R 13431441 13431482 chr2R 13431570 13431601 21 128 14.0 2.0 8.0 2.3 160 chr2R 13431441 intron CG42321 - chr2R 13431521 intron CG42321 - chr2R 13431601 intron CG42321 - chr2R_21_13430001 chr2R_13430001 RAL-306_125b 1112 chr2R 13439060 13439140 chr2R 13439225 13439304 17 163 3.5 8.5 6.0 2.4 244 chr2R 13439060 intergenic CG42321 -,cnn - chr2R 13439182 intergenic CG42321 -,cnn - chr2R 13439304 intergenic cnn -,CG42321 - chr2R_17_13435001 chr2R_13435001 RAL-306_125b 1113 chr2R 13532491 13532545 chr2R 13532657 13532700 18 164 4.0 8.0 6.0 2.6 209 chr2R 13532491 intron Vmat - chr2R 13532596 intron Vmat - chr2R 13532700 intron Vmat - chr2R_18_13530001 chr2R_13530001 RAL-306_125b 1114 chr2R 13554691 13554774 chr2R 13554833 13554904 9 134 0.0 7.0 3.5 2.0 213 chr2R 13554691 intron Roe1 + chr2R 13554798 intron Roe1 + chr2R 13554904 intron Roe1 + chr2R_9_13550001 chr2R_13550001 RAL-306_125b 1115 chr2R 13574368 13574426 chr2R 13574499 13574556 17 131 5.5 4.0 4.8 2.9 188 chr2R 13574368 intergenic CG42808 - chr2R 13574462 intergenic CG42808 -,CR44365 + chr2R 13574556 intergenic CG42808 -,CR44365 + chr2R_17_13570001 chr2R_13570001 RAL-306_125b 1116 chr2R 13580455 13580524 chr2R 13580855 13580906 jockey 22 395 8.0 4.0 6.0 3.1 451 chr2R 13580455 3` UTR CG6191 - chr2R 13580680 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580906 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_22_13580001 chr2R_13580001 RAL-306_125b 1117 chr2R 13622166 13622188 chr2R 13622294 13622316 11 128 11.5 17.0 14.2 0.7 150 chr2R 13622166 intergenic not near genes chr2R 13622241 intergenic not near genes chr2R 13622316 intergenic not near genes chr2R_11_13620001 chr2R_13620001 RAL-306_125b 1118 chr2R 13652661 13652725 chr2R 13652790 13652854 15 128 7.5 4.5 6.0 2.1 193 chr2R 13652661 intron fas + chr2R 13652758 intron fas + chr2R 13652854 intron fas + chr2R_15_13650001 chr2R_13650001 RAL-306_125b 1119 chr2R 13653441 13653465 chr2R 13653747 13653774 9 308 11.0 6.0 8.5 0.9 333 chr2R 13653441 intron fas + chr2R 13653608 intron fas + chr2R 13653774 intron fas + chr2R_9_13650001 chr2R_13650001 RAL-306_125b 1120 chr2R 13653467 13653503 chr2R 13653743 13653814 9 303 7.0 6.5 6.8 1.2 347 chr2R 13653467 intron fas + chr2R 13653640 intron fas + chr2R 13653814 intron fas + chr2R_9_13650001 chr2R_13650001 RAL-306_125b 1121 chr2R 13704211 13704284 chr2R 13704351 13704424 25 138 6.0 3.0 4.5 4.5 213 chr2R 13704211 intron fas + chr2R 13704318 intron fas + chr2R 13704424 intron fas + chr2R_25_13700001 chr2R_13700001 RAL-306_125b 1122 chr2R 13709796 13709854 chr2R 13709939 13709997 16 142 4.0 0.0 2.0 5.3 201 chr2R 13709796 intron fas + chr2R 13709896 intron fas + chr2R 13709997 intron fas + chr2R_16_13705001 chr2R_13705001 RAL-306_125b 1123 chr2R 13721169 13721226 chr2R 13721286 13721337 13 120 5.5 6.0 5.8 1.9 168 chr2R 13721169 intron fas + chr2R 13721253 intron fas + chr2R 13721337 intron fas + chr2R_13_13720001 chr2R_13720001 RAL-306_125b 1124 chr2R 13728082 13728132 chr2R 13735792 13735842 opus 10 7708 6.5 0.5 3.5 2.2 7760 chr2R 13728082 intron fas + chr2R 13731962 intron fas + chr2R 13735842 intron fas + chr2R_10_13730001 chr2R_13730001 RAL-306_125b 1125 chr2R 13738855 13738939 chr2R 13738996 13739080 17 141 4.0 5.0 4.5 3.1 225 chr2R 13738855 intron fas + chr2R 13738968 intron fas + chr2R 13739080 intron fas + chr2R_17_13735001 chr2R_13735001 RAL-306_125b 1126 chr2R 13768938 13768992 chr2R 13769087 13769135 9 148 6.5 8.0 7.2 1.1 197 chr2R 13768938 intergenic not near genes chr2R 13769036 intergenic not near genes chr2R 13769135 intergenic not near genes chr2R_9_13765001 chr2R_13765001 RAL-306_125b 1127 chr2R 13790281 13790294 chr2R 13790407 13790420 7 125 15.0 0.0 7.5 0.8 139 chr2R 13790281 intergenic not near genes chr2R 13790350 intergenic not near genes chr2R 13790420 intergenic not near genes chr2R_7_13790001 chr2R_13790001 RAL-306_125b 1128 chr2R 13793097 13793153 chr2R 13793223 13793228 13 120 5.5 7.0 6.2 1.8 131 chr2R 13793097 intergenic not near genes chr2R 13793162 intergenic not near genes chr2R 13793228 intergenic not near genes chr2R_13_13790001 chr2R_13790001 RAL-306_125b 1129 chr2R 13817653 13817663 chr2R 13817784 13817794 4 130 7.0 7.5 7.2 0.5 141 chr2R 13817653 intron stj + chr2R 13817724 intron stj + chr2R 13817794 intron stj + chr2R_4_13815001 chr2R_13815001 RAL-306_125b 1130 chr2R 13817672 13817692 chr2R 13817771 13817822 4 123 4.5 7.0 5.8 0.6 150 chr2R 13817672 intron stj + chr2R 13817747 intron stj + chr2R 13817822 intron stj + chr2R_4_13815001 chr2R_13815001 RAL-306_125b 1131 chr2R 13854901 13854974 chr2R 13855236 13855288 18 332 8.5 6.0 7.2 2.2 387 chr2R 13854901 exon,5` UTR CG6553 -,CR44367 + chr2R 13855094 exon,5` UTR CG6553 -,CR44367 + chr2R 13855288 exon,5` UTR CG6553 -,CR44367 + chr2R_18_13855001 chr2R_13855001 RAL-306_125b 1132 chr2R 13905572 13905622 chr2R 13907604 13907653 Rt1a 9 2027 14.0 5.5 9.8 0.8 2081 chr2R 13905572 intron shot - chr2R 13906612 intron shot - chr2R 13907653 intron shot - chr2R_9_13905001 chr2R_13905001 RAL-306_125b 1133 chr2R 13924422 13924441 chr2R 13924589 13924608 8 167 17.5 5.0 11.2 0.7 186 chr2R 13924422 intron shot - chr2R 13924515 intron shot - chr2R 13924608 intron shot - chr2R_8_13920001 chr2R_13920001 RAL-306_125b 1134 chr2R 13925825 13925889 chr2R 13926029 13926093 23 203 7.0 6.0 6.5 3.1 268 chr2R 13925825 intron shot - chr2R 13925959 intron shot - chr2R 13926093 intron shot - chr2R_23_13925001 chr2R_13925001 RAL-306_125b 1135 chr2R 13942443 13942462 chr2R 13942574 13942593 8 131 3.0 10.0 6.5 1.1 150 chr2R 13942443 intergenic DJ-1alpha -,shot - chr2R 13942518 intergenic DJ-1alpha -,shot - chr2R 13942593 exon DJ-1alpha - chr2R_8_13940001 chr2R_13940001 RAL-306_125b 1136 chr2R 14018116 14018178 chr2R 14018250 14018312 30 133 7.5 10.5 9.0 3.0 196 chr2R 14018116 intron mam + chr2R 14018214 intron mam + chr2R 14018312 intron mam + chr2R_30_14015001 chr2R_14015001 RAL-306_125b 1137 chr2R 14029585 14029617 chr2R 14029770 14029825 15 206 9.0 9.5 9.2 1.5 240 chr2R 14029585 intron mam + chr2R 14029705 intron mam + chr2R 14029825 intron mam + chr2R_15_14025001 chr2R_14025001 RAL-306_125b 1138 chr2R 14036456 14036527 chr2R 14036728 14036792 21 269 9.0 13.5 11.2 1.7 336 chr2R 14036456 intron mam + chr2R 14036624 intron mam + chr2R 14036792 intron mam + chr2R_21_14035001 chr2R_14035001 RAL-306_125b 1139 chr2R 14037212 14037287 chr2R 14037345 14037420 16 129 6.0 7.0 6.5 2.1 208 chr2R 14037212 intron mam + chr2R 14037316 intron mam + chr2R 14037420 intron mam + chr2R_16_14035001 chr2R_14035001 RAL-306_125b 1140 chr2R 14141910 14141938 chr2R 14142065 14142093 10 154 23.0 15.5 19.2 0.5 183 chr2R 14141910 intergenic not near genes chr2R 14142002 intergenic not near genes chr2R 14142093 intergenic not near genes chr2R_10_14140001 chr2R_14140001 RAL-306_125b 1141 chr2R 14142396 14142464 chr2R 14142536 14142597 20 138 8.0 6.5 7.2 2.4 201 chr2R 14142396 intergenic not near genes chr2R 14142496 intergenic not near genes chr2R 14142597 intergenic not near genes chr2R_20_14140001 chr2R_14140001 RAL-306_125b 1142 chr2R 14283397 14283438 chr2R 14283917 14283957 9 519 5.0 5.5 5.2 1.5 560 chr2R 14283397 intron Ih + chr2R 14283677 intron Ih + chr2R 14283957 intron Ih + chr2R_9_14280001 chr2R_14280001 RAL-306_125b 1143 chr2R 14284995 14285050 chr2R 14285140 14285168 17 142 9.5 6.0 7.8 1.9 173 chr2R 14284995 intron Ih + chr2R 14285082 intron Ih + chr2R 14285168 intron Ih + chr2R_17_14285001 chr2R_14285001 RAL-306_125b 1144 chr2R 14342178 14342237 chr2R 14342304 14342364 11 125 7.0 8.0 7.5 1.3 186 chr2R 14342178 intron Shroom + chr2R 14342271 intron Shroom + chr2R 14342364 intron Shroom + chr2R_11_14340001 chr2R_14340001 RAL-306_125b 1145 chr2R 14393732 14393804 chr2R 14393883 14393934 31 147 10.0 10.0 10.0 2.8 202 chr2R 14393732 intergenic not near genes chr2R 14393833 intergenic not near genes chr2R 14393934 intergenic not near genes chr2R_31_14390001 chr2R_14390001 RAL-306_125b 1146 chr2R 14438792 14438829 chr2R 14438926 14438963 6 130 11.5 2.5 7.0 0.8 171 chr2R 14438792 intron Oaz + chr2R 14438878 intron Oaz + chr2R 14438963 intron Oaz + chr2R_6_14435001 chr2R_14435001 RAL-306_125b 1147 chr2R 14438835 14438845 chr2R 14438922 14438969 7 117 9.0 2.0 5.5 1.1 134 chr2R 14438835 intron Oaz + chr2R 14438902 intron Oaz + chr2R 14438969 intron Oaz + chr2R_7_14435001 chr2R_14435001 RAL-306_125b 1148 chr2R 14457434 14457449 chr2R 14457560 14457575 6 126 0.0 6.0 3.0 1.5 141 chr2R 14457434 intron Oaz + chr2R 14457504 intron Oaz + chr2R 14457575 intron Oaz + chr2R_6_14455001 chr2R_14455001 RAL-306_125b 1149 chr2R 14467258 14467327 chr2R 14476466 14476533 roo 18 9206 3.5 5.5 4.5 3.3 9275 chr2R 14467258 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476533 5` UTR CR44462 + chr2R_18_14470001 chr2R_14470001 RAL-306_125b 1150 chr2R 14478922 14478982 chr2R 14479054 14479121 19 132 1.0 5.5 3.2 4.5 199 chr2R 14478922 intergenic not near genes chr2R 14479022 intergenic not near genes chr2R 14479121 intergenic not near genes chr2R_19_14475001 chr2R_14475001 RAL-306_125b 1151 chr2R 14489172 14489197 chr2R 14489316 14489341 6 144 14.5 11.5 13.0 0.4 169 chr2R 14489172 intron L + chr2R 14489256 intron L + chr2R 14489341 intron L + chr2R_6_14485001 chr2R_14485001 RAL-306_125b 1152 chr2R 14489198 14489242 chr2R 14489313 14489386 14 138 9.0 10.5 9.8 1.3 188 chr2R 14489198 intron L + chr2R 14489292 intron L + chr2R 14489386 intron L + chr2R_14_14485001 chr2R_14485001 RAL-306_125b 1153 chr2R 14497337 14497420 chr2R 14498550 14498605 1360 14 1209 0.0 6.0 3.0 3.5 1268 chr2R 14497337 intergenic Cpsf160 -,L + chr2R 14497971 intron Cpsf160 - chr2R 14498605 3` UTR Cpsf160 - chr2R_14_14495001 chr2R_14495001 RAL-306_125b 1154 chr2R 14514433 14514496 chr2R 14514579 14514638 14 143 5.0 8.0 6.5 1.9 205 chr2R 14514433 intron,exon Cpr51A -,CG30197 + chr2R 14514536 intron,intron Cpr51A -,CG30197 + chr2R 14514638 intron,intron Cpr51A -,CG30197 + chr2R_14_14510001 chr2R_14510001 RAL-306_125b 1155 chr2R 14530327 14530372 chr2R 14530466 14530511 6 139 8.0 4.5 6.2 0.8 184 chr2R 14530327 intron ttv + chr2R 14530419 intron ttv + chr2R 14530511 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-306_125b 1156 chr2R 14541191 14541254 chr2R 14541482 14541535 20 302 9.5 11.0 10.2 1.8 344 chr2R 14541191 intron ttv + chr2R 14541363 intron ttv + chr2R 14541535 intron ttv + chr2R_20_14540001 chr2R_14540001 RAL-306_125b 1157 chr2R 14562134 14562150 chr2R 14562267 14562280 4 132 13.0 4.5 8.8 0.4 146 chr2R 14562134 intron ttv + chr2R 14562207 intron ttv + chr2R 14562280 intron ttv + chr2R_4_14560001 chr2R_14560001 RAL-306_125b 1158 chr2R 14565537 14565580 chr2R 14565664 14565707 9 124 8.0 14.5 11.2 0.7 170 chr2R 14565537 intron ttv + chr2R 14565622 intron ttv + chr2R 14565707 intron ttv + chr2R_9_14565001 chr2R_14565001 RAL-306_125b 1159 chr2R 14566402 14566467 chr2R 14566539 14566604 16 136 6.0 2.5 4.2 3.1 202 chr2R 14566402 intron ttv + chr2R 14566503 intron ttv + chr2R 14566604 intron ttv + chr2R_16_14565001 chr2R_14565001 RAL-306_125b 1160 chr2R 14623827 14623886 chr2R 14623973 14624032 6 146 5.5 11.0 8.2 0.7 205 chr2R 14623827 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703b + chr2R 14623930 5` UTR Uhg5 + chr2R 14624032 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_6_14620001 chr2R_14620001 RAL-306_125b 1161 chr2R 14653858 14653865 chr2R 14654008 14654015 5 150 15.0 8.5 11.8 0.4 157 chr2R 14653858 intergenic not near genes chr2R 14653936 intergenic not near genes chr2R 14654015 intergenic not near genes chr2R_5_14650001 chr2R_14650001 RAL-306_125b 1162 chr2R 14653867 14653893 chr2R 14654006 14654043 14 147 10.0 7.0 8.5 1.5 176 chr2R 14653867 intergenic not near genes chr2R 14653955 intergenic not near genes chr2R 14654043 intergenic not near genes chr2R_14_14650001 chr2R_14650001 RAL-306_125b 1163 chr2R 14653894 14653926 chr2R 14654002 14654054 14 139 6.0 6.0 6.0 2.0 160 chr2R 14653894 intergenic not near genes chr2R 14653974 intergenic not near genes chr2R 14654054 intergenic not near genes chr2R_14_14650001 chr2R_14650001 RAL-306_125b 1164 chr2R 14722263 14722300 chr2R 14722417 14722453 11 153 9.5 6.0 7.8 1.2 190 chr2R 14722263 intergenic not near genes chr2R 14722358 intergenic not near genes chr2R 14722453 intergenic not near genes chr2R_11_14720001 chr2R_14720001 RAL-306_125b 1165 chr2R 14733343 14733421 chr2R 14733481 14733542 16 133 5.5 2.5 4.0 3.2 199 chr2R 14733343 intergenic not near genes chr2R 14733442 intergenic not near genes chr2R 14733542 intergenic not near genes chr2R_16_14730001 chr2R_14730001 RAL-306_125b 1166 chr2R 14766696 14766771 chr2R 14766830 14766830 24 130 6.0 10.0 8.0 2.7 134 chr2R 14766696 intron Spred - chr2R 14766763 intron Spred - chr2R 14766830 intron Spred - chr2R_24_14765001 chr2R_14765001 RAL-306_125b 1167 chr2R 14772722 14772783 chr2R 14772871 14772932 14 148 5.5 6.5 6.0 2.0 210 chr2R 14772722 3` UTR kn - chr2R 14772827 3` UTR kn - chr2R 14772932 3` UTR kn - chr2R_14_14770001 chr2R_14770001 RAL-306_125b 1168 chr2R 14785983 14786056 chr2R 14786123 14786199 23 142 0.0 10.5 5.2 3.7 216 chr2R 14785983 intron kn - chr2R 14786091 intron kn - chr2R 14786199 intron kn - chr2R_23_14785001 chr2R_14785001 RAL-306_125b 1169 chr2R 14796297 14796361 chr2R 14796444 14796508 25 145 6.0 13.5 9.8 2.3 211 chr2R 14796297 intron kn - chr2R 14796402 intron kn - chr2R 14796508 intron kn - chr2R_25_14795001 chr2R_14795001 RAL-306_125b 1170 chr2R 14797314 14797357 chr2R 14797449 14797523 10 152 5.0 5.0 5.0 1.7 209 chr2R 14797314 intron kn - chr2R 14797418 intron kn - chr2R 14797523 intron kn - chr2R_10_14795001 chr2R_14795001 RAL-306_125b 1171 chr2R 14803427 14803474 chr2R 14803557 14803604 15 130 1.5 7.0 4.2 2.9 177 chr2R 14803427 intron kn - chr2R 14803516 intron kn - chr2R 14803604 intron kn - chr2R_15_14800001 chr2R_14800001 RAL-306_125b 1172 chr2R 14816063 14816137 chr2R 14816209 14816266 12 133 8.5 12.0 10.2 1.1 203 chr2R 14816063 intergenic not near genes chr2R 14816164 intergenic not near genes chr2R 14816266 intergenic not near genes chr2R_12_14815001 chr2R_14815001 RAL-306_125b 1173 chr2R 14826350 14826384 chr2R 14826504 14826538 14 154 4.5 5.0 4.8 2.4 188 chr2R 14826350 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826538 intergenic not near genes chr2R_14_14825001 chr2R_14825001 RAL-306_125b 1174 chr2R 14842341 14842394 chr2R 14842487 14842540 18 145 6.5 4.0 5.2 2.9 199 chr2R 14842341 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842540 intergenic NaPi-T - chr2R_18_14840001 chr2R_14840001 RAL-306_125b 1175 chr2R 14889170 14889182 chr2R 14897828 14897840 Max-element 5 8658 18.5 0.0 9.2 0.5 8670 chr2R 14889170 intergenic Cyp6a8 - chr2R 14893505 intergenic not near genes chr2R 14897840 intergenic not near genes chr2R_5_14890001 chr2R_14890001 RAL-306_125b 1176 chr2R 14889184 14889241 chr2R 14897827 14897891 Max-element 7 8647 9.0 0.0 4.5 1.3 8707 chr2R 14889184 intergenic Cyp6a8 - chr2R 14893538 intergenic not near genes chr2R 14897891 intergenic not near genes chr2R_7_14890001 chr2R_14890001 RAL-306_125b 1177 chr2R 14911651 14911722 chr2R 14911824 14911895 26 171 7.5 6.0 6.8 3.3 244 chr2R 14911651 intron CG10249 - chr2R 14911773 intron CG10249 - chr2R 14911895 intron CG10249 - chr2R_26_14910001 chr2R_14910001 RAL-306_125b 1178 chr2R 14916505 14916557 chr2R 14916635 14916682 17 129 8.5 1.5 5.0 2.8 177 chr2R 14916505 intron CG10249 - chr2R 14916594 intron CG10249 - chr2R 14916682 intron CG10249 - chr2R_17_14915001 chr2R_14915001 RAL-306_125b 1179 chr2R 14930804 14930858 chr2R 14930947 14931001 6 143 0.0 0.5 0.2 5.0 197 chr2R 14930804 intron CG10253 - chr2R 14930902 intron CG10253 - chr2R 14931001 intron CG10253 - chr2R_6_14930001 chr2R_14930001 RAL-306_125b 1180 chr2R 14955622 14955702 chr2R 14955761 14955841 19 136 6.0 3.5 4.8 3.3 219 chr2R 14955622 intron aPKC - chr2R 14955732 intron aPKC - chr2R 14955841 intron aPKC - chr2R_19_14955001 chr2R_14955001 RAL-306_125b 1181 chr2R 14957613 14957658 chr2R 14957758 14957806 4 146 3.5 2.0 2.8 1.1 193 chr2R 14957613 intron aPKC - chr2R 14957710 intron aPKC - chr2R 14957806 intron aPKC - chr2R_4_14955001 chr2R_14955001 RAL-306_125b 1182 chr2R 14998528 14998537 chr2R 14998668 14998677 5 140 10.5 11.0 10.8 0.4 149 chr2R 14998528 intergenic not near genes chr2R 14998602 intergenic not near genes chr2R 14998677 intergenic not near genes chr2R_5_14995001 chr2R_14995001 RAL-306_125b 1183 chr2R 14998540 14998553 chr2R 14998663 14998693 6 137 6.0 11.0 8.5 0.6 153 chr2R 14998540 intergenic not near genes chr2R 14998616 intergenic not near genes chr2R 14998693 intergenic not near genes chr2R_6_14995001 chr2R_14995001 RAL-306_125b 1184 chr2R 15004683 15004751 chr2R 15005062 15005130 jockey 13 378 9.0 0.0 4.5 2.4 447 chr2R 15004683 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005130 intergenic not near genes chr2R_13_15000001 chr2R_15000001 RAL-306_125b 1185 chr2R 15015413 15015488 chr2R 15022887 15022962 mdg1 18 7472 4.0 6.5 5.2 2.9 7549 chr2R 15015413 intron hbs + chr2R 15019188 intron hbs + chr2R 15022962 intron hbs + chr2R_18_15015001 chr2R_15015001 RAL-306_125b 1186 chr2R 15065619 15065646 chr2R 15065702 15065764 6 99 4.0 5.5 4.8 1.0 145 chr2R 15065619 intergenic not near genes chr2R 15065692 intergenic not near genes chr2R 15065764 intergenic not near genes chr2R_6_15065001 chr2R_15065001 RAL-306_125b 1187 chr2R 15073076 15073113 chr2R 15073209 15073246 12 132 8.5 6.5 7.5 1.4 170 chr2R 15073076 intergenic not near genes chr2R 15073161 intergenic not near genes chr2R 15073246 intergenic not near genes chr2R_12_15070001 chr2R_15070001 RAL-306_125b 1188 chr2R 15084933 15084996 chr2R 15092032 15092094 297 8 7098 5.0 5.0 5.0 1.3 7161 chr2R 15084933 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092094 5` UTR CR44457 + chr2R_8_15085001 chr2R_15085001 RAL-306_125b 1189 chr2R 15119272 15119342 chr2R 15127803 15127858 Tirant 18 8525 8.5 12.5 10.5 1.6 8586 chr2R 15119272 intron chn + chr2R 15123565 intron chn + chr2R 15127858 intron chn + chr2R_18_15120001 chr2R_15120001 RAL-306_125b 1190 chr2R 15137918 15137964 chr2R 15138047 15138096 8 131 4.0 2.0 3.0 2.0 178 chr2R 15137918 intron chn + chr2R 15138007 intron chn + chr2R 15138096 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-306_125b 1191 chr2R 15175772 15175836 chr2R 15176899 15176963 14 1127 7.0 3.5 5.2 2.3 1191 chr2R 15175772 intron igl + chr2R 15176368 intron igl + chr2R 15176963 intron igl + chr2R_14_15175001 chr2R_15175001 RAL-306_125b 1192 chr2R 15230368 15230381 chr2R 15230645 15230673 6 280 31.0 2.0 16.5 0.3 305 chr2R 15230368 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230673 intron,5` UTR Fs -,CR44370 + chr2R_6_15230001 chr2R_15230001 RAL-306_125b 1193 chr2R 15230354 15230366 chr2R 15231009 15231102 7 667 33.5 1.0 17.2 0.4 748 chr2R 15230354 intron,5` UTR Fs -,CR44370 + chr2R 15230728 intron,5` UTR Fs -,CR44370 + chr2R 15231102 intron,5` UTR Fs -,CR44370 + chr2R_7_15230001 chr2R_15230001 RAL-306_125b 1194 chr2R 15259016 15259081 chr2R 15259150 15259212 24 133 9.0 11.0 10.0 2.2 196 chr2R 15259016 intron ItgalphaPS4 + chr2R 15259114 intron ItgalphaPS4 + chr2R 15259212 intron ItgalphaPS4 + chr2R_24_15255001 chr2R_15255001 RAL-306_125b 1195 chr2R 15294642 15294650 chr2R 15294774 15294782 7 132 15.0 5.0 10.0 0.6 140 chr2R 15294642 intron,3` UTR Trpm -,CR44241 - chr2R 15294712 intron,3` UTR Trpm -,CR44241 - chr2R 15294782 intron,3` UTR Trpm -,CR44241 - chr2R_7_15290001 chr2R_15290001 RAL-306_125b 1196 chr2R 15294651 15294705 chr2R 15294773 15294811 10 128 5.5 5.0 5.2 1.6 160 chr2R 15294651 intron,3` UTR Trpm -,CR44241 - chr2R 15294731 intron,3` UTR Trpm -,CR44241 - chr2R 15294811 intron,3` UTR Trpm -,CR44241 - chr2R_10_15290001 chr2R_15290001 RAL-306_125b 1197 chr2R 15295349 15295352 chr2R 15295540 15295543 4 191 7.5 8.5 8.0 0.4 194 chr2R 15295349 intron Trpm - chr2R 15295446 intron Trpm - chr2R 15295543 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-306_125b 1198 chr2R 15296110 15296171 chr2R 15296243 15296304 23 129 6.0 6.5 6.2 3.2 194 chr2R 15296110 intron Trpm - chr2R 15296207 intron Trpm - chr2R 15296304 intron Trpm - chr2R_23_15295001 chr2R_15295001 RAL-306_125b 1199 chr2R 15330164 15330230 chr2R 15330348 15330414 22 184 2.0 6.5 4.2 4.2 250 chr2R 15330164 intergenic CR44371 - chr2R 15330289 intergenic CR44371 - chr2R 15330414 3` UTR CR44371 - chr2R_22_15330001 chr2R_15330001 RAL-306_125b 1200 chr2R 15340653 15340662 chr2R 15349281 15349294 Tirant 5 8630 14.0 9.5 11.8 0.4 8641 chr2R 15340653 intron unc-5 + chr2R 15344974 intron unc-5 + chr2R 15349294 intron unc-5 + chr2R_5_15340001 chr2R_15340001 RAL-306_125b 1201 chr2R 15363625 15363670 chr2R 15363743 15363772 9 124 7.5 4.5 6.0 1.3 147 chr2R 15363625 intron unc-5 + chr2R 15363698 intron unc-5 + chr2R 15363772 intron unc-5 + chr2R_9_15360001 chr2R_15360001 RAL-306_125b 1202 chr2R 15393250 15393310 chr2R 15393377 15393437 19 126 14.0 12.0 13.0 1.4 187 chr2R 15393250 intergenic not near genes chr2R 15393344 intergenic not near genes chr2R 15393437 intergenic not near genes chr2R_19_15390001 chr2R_15390001 RAL-306_125b 1203 chr2R 15405140 15405199 chr2R 15405269 15405328 10 128 0.0 4.5 2.2 3.1 188 chr2R 15405140 intron CG43729 + chr2R 15405234 intron CG43729 + chr2R 15405328 intron CG43729 + chr2R_10_15405001 chr2R_15405001 RAL-306_125b 1204 chr2R 15497620 15497668 chr2R 15497749 15497797 13 121 12.5 7.5 10.0 1.2 177 chr2R 15497620 intergenic CG12964 - chr2R 15497708 intergenic CG12964 - chr2R 15497797 intergenic not near genes chr2R_13_15495001 chr2R_15495001 RAL-306_125b 1205 chr2R 15578536 15578606 chr2R 15578837 15578907 11 301 9.5 2.0 5.8 1.6 371 chr2R 15578536 intergenic not near genes chr2R 15578722 intergenic not near genes chr2R 15578907 intergenic not near genes chr2R_11_15575001 chr2R_15575001 RAL-306_125b 1206 chr2R 15645628 15645701 chr2R 15645774 15645848 8 144 2.5 0.0 1.2 3.6 220 chr2R 15645628 intron CG42524 + chr2R 15645738 intron CG42524 + chr2R 15645848 intron CG42524 + chr2R_8_15645001 chr2R_15645001 RAL-306_125b 1207 chr2R 15685346 15685396 chr2R 15685499 15685549 14 152 4.0 10.5 7.2 1.7 203 chr2R 15685346 intron,exon Ranbp11 +,CG30082 - chr2R 15685448 intron,intron Ranbp11 +,CG30082 - chr2R 15685549 intron,exon Ranbp11 +,CG30082 - chr2R_14_15685001 chr2R_15685001 RAL-306_125b 1208 chr2R 15704271 15704299 chr2R 15704726 15704754 6 455 20.5 5.0 12.8 0.4 483 chr2R 15704271 intergenic not near genes chr2R 15704512 intergenic not near genes chr2R 15704754 intergenic not near genes chr2R_6_15700001 chr2R_15700001 RAL-306_125b 1209 chr2R 15828111 15828136 chr2R 15828321 15828346 9 210 1.0 7.0 4.0 1.8 235 chr2R 15828111 intron,intron tun +,Poxn - chr2R 15828228 intron,intron tun +,Poxn - chr2R 15828346 intron,intron tun +,Poxn - chr2R_9_15825001 chr2R_15825001 RAL-306_125b 1210 chr2R 15845101 15845180 chr2R 15845230 15845307 15 127 5.0 6.5 5.8 2.2 206 chr2R 15845101 intron,intron tun +,CG8249 - chr2R 15845204 intron,intron tun +,CG8249 - chr2R 15845307 intron,exon tun +,CG8249 - chr2R_15_15845001 chr2R_15845001 RAL-306_125b 1211 chr2R 15891769 15891835 chr2R 15891895 15891961 20 126 3.5 7.5 5.5 3.1 192 chr2R 15891769 intron sli - chr2R 15891865 intron sli - chr2R 15891961 intron sli - chr2R_20_15890001 chr2R_15890001 RAL-306_125b 1212 chr2R 15901068 15901127 chr2R 15901194 15901254 10 125 9.5 8.5 9.0 1.0 186 chr2R 15901068 intron sli - chr2R 15901161 intron sli - chr2R 15901254 intron sli - chr2R_10_15900001 chr2R_15900001 RAL-306_125b 1213 chr2R 16037180 16037224 chr2R 16037306 16037351 10 125 11.5 8.0 9.8 0.9 171 chr2R 16037180 intron SP2353 + chr2R 16037266 intron SP2353 + chr2R 16037351 intron SP2353 + chr2R_10_16035001 chr2R_16035001 RAL-306_125b 1214 chr2R 16040722 16040789 chr2R 16040859 16040926 18 136 8.5 4.5 6.5 2.4 204 chr2R 16040722 intron SP2353 + chr2R 16040824 intron SP2353 + chr2R 16040926 exon SP2353 + chr2R_18_16040001 chr2R_16040001 RAL-306_125b 1215 chr2R 16054910 16054956 chr2R 16055043 16055089 8 126 4.0 8.5 6.2 1.1 179 chr2R 16054910 intron CG8405 + chr2R 16055000 intron CG8405 + chr2R 16055089 intron CG8405 + chr2R_8_16050001 chr2R_16050001 RAL-306_125b 1216 chr2R 16136592 16136652 chr2R 16136719 16136779 19 127 14.0 9.5 11.8 1.5 187 chr2R 16136592 intron spin + chr2R 16136686 intron spin + chr2R 16136779 intron spin + chr2R_19_16135001 chr2R_16135001 RAL-306_125b 1217 chr2R 16245365 16245430 chr2R 16245508 16245574 20 141 2.5 8.0 5.2 3.2 209 chr2R 16245365 intron CngA - chr2R 16245470 intron CngA - chr2R 16245574 intron CngA - chr2R_20_16245001 chr2R_16245001 RAL-306_125b 1218 chr2R 16352819 16352867 chr2R 16352952 16353000 17 133 4.0 1.0 2.5 4.9 181 chr2R 16352819 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16353000 intergenic not near genes chr2R_17_16350001 chr2R_16350001 RAL-306_125b 1219 chr2R 16474295 16474363 chr2R 16474431 16474499 24 136 9.0 7.0 8.0 2.7 204 chr2R 16474295 intergenic not near genes chr2R 16474397 intergenic not near genes chr2R 16474499 intergenic not near genes chr2R_24_16470001 chr2R_16470001 RAL-306_125b 1220 chr2R 16489235 16489295 chr2R 16489359 16489384 27 131 10.5 11.5 11.0 2.2 149 chr2R 16489235 intergenic CG33459 + chr2R 16489310 intergenic CG33459 + chr2R 16489384 intergenic CG33459 + chr2R_27_16485001 chr2R_16485001 RAL-306_125b 1221 chr2R 16517998 16518070 chr2R 16518124 16518196 20 126 6.5 3.5 5.0 3.3 198 chr2R 16517998 intron Sema-2a + chr2R 16518097 intron Sema-2a + chr2R 16518196 intron Sema-2a + chr2R_20_16515001 chr2R_16515001 RAL-306_125b 1222 chr2R 16538045 16538086 chr2R 16538189 16538230 10 144 7.0 9.0 8.0 1.1 185 chr2R 16538045 intergenic not near genes chr2R 16538138 intergenic not near genes chr2R 16538230 intergenic not near genes chr2R_10_16535001 chr2R_16535001 RAL-306_125b 1223 chr2R 16539598 16539660 chr2R 16544857 16544919 copia 26 5258 6.5 7.0 6.8 3.3 5321 chr2R 16539598 intergenic not near genes chr2R 16542258 intergenic not near genes chr2R 16544919 intergenic not near genes chr2R_26_16540001 chr2R_16540001 RAL-306_125b 1224 chr2R 16571827 16571901 chr2R 16571972 16571986 26 140 6.5 8.5 7.5 3.1 159 chr2R 16571827 intergenic CG4927 + chr2R 16571906 intergenic CG4927 + chr2R 16571986 intergenic CG4927 + chr2R_26_16570001 chr2R_16570001 RAL-306_125b 1225 chr2R 16617069 16617077 chr2R 16617178 16617207 6 126 12.5 17.5 15.0 0.4 138 chr2R 16617069 intron CG5065 + chr2R 16617138 intron CG5065 + chr2R 16617207 intron CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-306_125b 1226 chr2R 16617079 16617088 chr2R 16617175 16617218 4 122 9.5 17.0 13.2 0.3 139 chr2R 16617079 intron CG5065 + chr2R 16617148 intron CG5065 + chr2R 16617218 intron CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-306_125b 1227 chr2R 16701947 16702022 chr2R 16702084 16702141 27 133 4.5 4.0 4.2 5.2 194 chr2R 16701947 intron CG30463 - chr2R 16702044 intron CG30463 - chr2R 16702141 intron CG30463 - chr2R_27_16700001 chr2R_16700001 RAL-306_125b 1228 chr2R 16713055 16713066 chr2R 16713189 16713200 5 134 2.5 22.0 12.2 0.4 145 chr2R 16713055 intron CG30463 - chr2R 16713128 intron CG30463 - chr2R 16713200 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-306_125b 1229 chr2R 16775606 16775673 chr2R 16775923 16775990 34 317 8.0 7.5 7.8 3.9 384 chr2R 16775606 3` UTR Arp53D + chr2R 16775798 intergenic Arp53D + chr2R 16775990 intergenic Arp53D + chr2R_34_16775001 chr2R_16775001 RAL-306_125b 1230 chr2R 16806311 16806369 chr2R 16806637 16806695 19 325 9.5 6.0 7.8 2.2 384 chr2R 16806311 intergenic not near genes chr2R 16806503 intergenic not near genes chr2R 16806695 intergenic not near genes chr2R_19_16805001 chr2R_16805001 RAL-306_125b 1231 chr2R 16879985 16880064 chr2R 16880112 16880191 14 127 5.5 1.0 3.2 3.3 206 chr2R 16879985 intron CG8910 - chr2R 16880088 intron CG8910 - chr2R 16880191 intron CG8910 - chr2R_14_16880001 chr2R_16880001 RAL-306_125b 1232 chr2R 16892269 16892314 chr2R 16892411 16892456 12 140 5.0 7.5 6.2 1.7 187 chr2R 16892269 intron CG8910 - chr2R 16892362 intron CG8910 - chr2R 16892456 intron CG8910 - chr2R_12_16890001 chr2R_16890001 RAL-306_125b 1233 chr2R 16981939 16982083 chr2R 16982097 16982206 15 174 0.0 0.0 0.0 15.0 267 chr2R 16981939 intron Cbp53E + chr2R 16982072 intron Cbp53E + chr2R 16982206 intron Cbp53E + chr2R_15_16980001 chr2R_16980001 RAL-306_125b 1234 chr2R 17147204 17147219 chr2R 17152285 17152300 jockey 14 5080 17.5 13.0 15.2 0.9 5096 chr2R 17147204 intergenic not near genes chr2R 17149752 intergenic not near genes chr2R 17152300 intergenic not near genes chr2R_14_17145001 chr2R_17145001 RAL-306_125b 1235 chr2R 17147220 17147258 chr2R 17152276 17152339 jockey 18 5076 10.5 11.0 10.8 1.5 5119 chr2R 17147220 intergenic not near genes chr2R 17149780 intergenic not near genes chr2R 17152339 intergenic not near genes chr2R_18_17145001 chr2R_17145001 RAL-306_125b 1236 chr2R 17161307 17161355 chr2R 17161564 17161609 7 251 8.0 1.5 4.8 1.2 302 chr2R 17161307 intergenic CG30457 - chr2R 17161458 intergenic not near genes chr2R 17161609 intergenic not near genes chr2R_7_17160001 chr2R_17160001 RAL-306_125b 1237 chr2R 17176353 17176362 chr2R 17182593 17182602 diver 7 6240 0.0 13.5 6.8 0.9 6249 chr2R 17176353 intergenic not near genes chr2R 17179478 intergenic not near genes chr2R 17182602 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-306_125b 1238 chr2R 17176363 17176382 chr2R 17182579 17182622 diver 9 6234 0.0 10.0 5.0 1.5 6259 chr2R 17176363 intergenic not near genes chr2R 17179492 intergenic not near genes chr2R 17182622 intergenic not near genes chr2R_9_17175001 chr2R_17175001 RAL-306_125b 1239 chr2R 17236472 17236525 chr2R 17241726 17241728 copia 8 5248 6.5 11.0 8.8 0.8 5256 chr2R 17236472 intron mbl + chr2R 17239100 intron mbl + chr2R 17241728 intron mbl + chr2R_8_17235001 chr2R_17235001 RAL-306_125b 1240 chr2R 17273057 17273080 chr2R 17273190 17273213 7 133 15.0 6.0 10.5 0.6 156 chr2R 17273057 intron mbl + chr2R 17273135 intron mbl + chr2R 17273213 intron mbl + chr2R_7_17270001 chr2R_17270001 RAL-306_125b 1241 chr2R 17273084 17273118 chr2R 17273183 17273251 6 124 6.5 5.0 5.8 0.9 167 chr2R 17273084 intron mbl + chr2R 17273168 intron mbl + chr2R 17273251 intron mbl + chr2R_6_17270001 chr2R_17270001 RAL-306_125b 1242 chr2R 17319122 17319129 chr2R 17319397 17319420 4 287 4.5 12.0 8.2 0.4 298 chr2R 17319122 intron mbl + chr2R 17319271 intron mbl + chr2R 17319420 intron mbl + chr2R_4_17315001 chr2R_17315001 RAL-306_125b 1243 chr2R 17381539 17381615 chr2R 17381677 17381743 20 133 8.5 7.0 7.8 2.3 204 chr2R 17381539 intergenic not near genes chr2R 17381641 intergenic not near genes chr2R 17381743 intergenic not near genes chr2R_20_17380001 chr2R_17380001 RAL-306_125b 1244 chr2R 17395238 17395308 chr2R 17395366 17395436 31 127 8.5 7.5 8.0 3.4 198 chr2R 17395238 intron Sip1 + chr2R 17395337 intron Sip1 + chr2R 17395436 intron Sip1 + chr2R_31_17395001 chr2R_17395001 RAL-306_125b 1245 chr2R 17397761 17397819 chr2R 17397902 17397960 22 140 7.0 5.0 6.0 3.1 199 chr2R 17397761 intron Sip1 + chr2R 17397860 intron Sip1 + chr2R 17397960 intron Sip1 + chr2R_22_17395001 chr2R_17395001 RAL-306_125b 1246 chr2R 17458961 17459030 chr2R 17459096 17459165 26 133 4.0 8.5 6.2 3.6 204 chr2R 17458961 intron CG14478 + chr2R 17459063 intron CG14478 + chr2R 17459165 intron CG14478 + chr2R_26_17455001 chr2R_17455001 RAL-306_125b 1247 chr2R 17485877 17485941 chr2R 17490697 17490759 F-element 17 4816 6.5 6.0 6.2 2.4 4882 chr2R 17485877 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488318 intron NT5E-2 + chr2R 17490759 intron NT5E-2 + chr2R_17_17485001 chr2R_17485001 RAL-306_125b 1248 chr2R 17547530 17547597 chr2R 17547660 17547722 31 127 13.0 6.0 9.5 3.0 192 chr2R 17547530 intergenic RpL18A -,MESR4 + chr2R 17547626 intergenic MESR4 +,RpL18A - chr2R 17547722 intergenic MESR4 +,RpL18A - chr2R_31_17545001 chr2R_17545001 RAL-306_125b 1249 chr2R 17598056 17598126 chr2R 17598189 17598259 31 131 7.0 5.0 6.0 4.4 203 chr2R 17598056 intron lack + chr2R 17598158 intron lack + chr2R 17598259 intron lack + chr2R_31_17595001 chr2R_17595001 RAL-306_125b 1250 chr2R 17679572 17679602 chr2R 17679749 17679779 9 177 4.5 9.5 7.0 1.1 207 chr2R 17679572 intron Sema-1b - chr2R 17679676 intron Sema-1b - chr2R 17679779 intron Sema-1b - chr2R_9_17675001 chr2R_17675001 RAL-306_125b 1251 chr2R 17708348 17708404 chr2R 17708479 17708535 20 131 9.5 13.5 11.5 1.6 187 chr2R 17708348 intron CG6424 - chr2R 17708442 intron CG6424 - chr2R 17708535 intron CG6424 - chr2R_20_17705001 chr2R_17705001 RAL-306_125b 1252 chr2R 17783986 17784044 chr2R 17784271 17784335 pogo 18 286 5.5 6.5 6.0 2.6 349 chr2R 17783986 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784335 intergenic mir-31a - chr2R_18_17780001 chr2R_17780001 RAL-306_125b 1253 chr2R 17785040 17785090 chr2R 17785177 17785228 17 136 8.0 15.5 11.8 1.3 188 chr2R 17785040 intergenic not near genes chr2R 17785134 intergenic not near genes chr2R 17785228 intergenic not near genes chr2R_17_17785001 chr2R_17785001 RAL-306_125b 1254 chr2R 17792563 17792619 chr2R 17792685 17792757 17 131 4.5 3.5 4.0 3.4 194 chr2R 17792563 intergenic CG5033 +,Dhit + chr2R 17792660 intergenic Dhit +,CG5033 + chr2R 17792757 intergenic Dhit +,CG5033 + chr2R_17_17790001 chr2R_17790001 RAL-306_125b 1255 chr2R 17794768 17794777 chr2R 17794897 17794906 4 129 1.0 9.0 5.0 0.7 138 chr2R 17794768 intron Dhit + chr2R 17794837 intron Dhit + chr2R 17794906 intron Dhit + chr2R_4_17790001 chr2R_17790001 RAL-306_125b 1256 chr2R 17872052 17872115 chr2R 17872189 17872251 21 136 5.5 8.5 7.0 2.6 199 chr2R 17872052 intergenic Mapmodulin - chr2R 17872152 intergenic Mapmodulin - chr2R 17872251 intergenic Mapmodulin - chr2R_21_17870001 chr2R_17870001 RAL-306_125b 1257 chr2R 17884432 17884480 chr2R 17884569 17884623 15 139 6.5 7.5 7.0 1.9 191 chr2R 17884432 intron Elk + chr2R 17884528 intron Elk + chr2R 17884623 intron Elk + chr2R_15_17880001 chr2R_17880001 RAL-306_125b 1258 chr2R 17911580 17911628 chr2R 17911706 17911754 7 126 0.0 10.0 5.0 1.2 174 chr2R 17911580 intron Elk + chr2R 17911667 intron Elk + chr2R 17911754 intron Elk + chr2R_7_17910001 chr2R_17910001 RAL-306_125b 1259 chr2R 17918121 17918135 chr2R 17918248 17918262 8 127 21.5 1.0 11.2 0.7 141 chr2R 17918121 intron Elk + chr2R 17918192 intron Elk + chr2R 17918262 intron Elk + chr2R_8_17915001 chr2R_17915001 RAL-306_125b 1260 chr2R 17918137 17918159 chr2R 17918244 17918266 7 121 16.0 1.5 8.8 0.7 129 chr2R 17918137 intron Elk + chr2R 17918202 intron Elk + chr2R 17918266 intron Elk + chr2R_7_17915001 chr2R_17915001 RAL-306_125b 1261 chr2R 17918171 17918181 chr2R 17918240 17918308 4 97 11.0 1.5 6.2 0.6 137 chr2R 17918171 intron Elk + chr2R 17918240 intron Elk + chr2R 17918308 intron Elk + chr2R_4_17915001 chr2R_17915001 RAL-306_125b 1262 chr2R 17921415 17921460 chr2R 17921547 17921592 19 132 0.0 1.5 0.8 10.6 177 chr2R 17921415 intron Elk + chr2R 17921504 intron Elk + chr2R 17921592 intron Elk + chr2R_19_17920001 chr2R_17920001 RAL-306_125b 1263 chr2R 17929119 17929142 chr2R 17929249 17929272 5 129 5.5 4.5 5.0 0.8 153 chr2R 17929119 intergenic not near genes chr2R 17929196 intergenic not near genes chr2R 17929272 intergenic not near genes chr2R_5_17925001 chr2R_17925001 RAL-306_125b 1264 chr2R 17937471 17937548 chr2R 17937601 17937678 23 128 6.5 9.0 7.8 2.6 207 chr2R 17937471 intergenic not near genes chr2R 17937574 intergenic not near genes chr2R 17937678 intergenic not near genes chr2R_23_17935001 chr2R_17935001 RAL-306_125b 1265 chr2R 17982877 17982948 chr2R 17983012 17983033 28 133 7.5 9.5 8.5 2.9 156 chr2R 17982877 intron dpr13 - chr2R 17982955 intron dpr13 - chr2R 17983033 intron dpr13 - chr2R_28_17980001 chr2R_17980001 RAL-306_125b 1266 chr2R 17984621 17984656 chr2R 17984753 17984788 12 132 7.5 4.5 6.0 1.7 167 chr2R 17984621 intron dpr13 - chr2R 17984704 intron dpr13 - chr2R 17984788 intron dpr13 - chr2R_12_17980001 chr2R_17980001 RAL-306_125b 1267 chr2R 18009741 18009795 chr2R 18009867 18009898 13 118 5.0 2.5 3.8 2.7 157 chr2R 18009741 intergenic not near genes chr2R 18009820 intergenic not near genes chr2R 18009898 intergenic not near genes chr2R_13_18005001 chr2R_18005001 RAL-306_125b 1268 chr2R 18045625 18045693 chr2R 18046027 18046095 jockey 32 402 8.5 9.5 9.0 3.2 470 chr2R 18045625 intergenic not near genes chr2R 18045860 intergenic not near genes chr2R 18046095 intergenic CG5767 - chr2R_32_18045001 chr2R_18045001 RAL-306_125b 1269 chr2R 18051378 18051382 chr2R 18051506 18051510 6 128 10.5 8.0 9.2 0.6 132 chr2R 18051378 intron Muc55B - chr2R 18051444 intron Muc55B - chr2R 18051510 intron Muc55B - chr2R_6_18050001 chr2R_18050001 RAL-306_125b 1270 chr2R 18074567 18074622 chr2R 18074682 18074748 18 124 7.5 8.0 7.8 2.0 181 chr2R 18074567 intron CG34386 + chr2R 18074658 intron CG34386 + chr2R 18074748 intron CG34386 + chr2R_18_18070001 chr2R_18070001 RAL-306_125b 1271 chr2R 18111638 18111709 chr2R 18115556 18115628 F-element 18 3917 5.0 7.0 6.0 2.6 3990 chr2R 18111638 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115628 intergenic not near genes chr2R_18_18110001 chr2R_18110001 RAL-306_125b 1272 chr2R 18127369 18127379 chr2R 18127534 18127544 4 164 1.0 17.0 9.0 0.4 175 chr2R 18127369 intron Spn55B + chr2R 18127456 intron Spn55B + chr2R 18127544 intron Spn55B + chr2R_4_18125001 chr2R_18125001 RAL-306_125b 1273 chr2R 18141829 18141856 chr2R 18141967 18141994 10 137 3.5 9.0 6.2 1.4 165 chr2R 18141829 intron pAbp + chr2R 18141912 intron pAbp + chr2R 18141994 intron pAbp + chr2R_10_18140001 chr2R_18140001 RAL-306_125b 1274 chr2R 18190821 18190841 chr2R 18190947 18190967 8 125 15.0 6.5 10.8 0.7 146 chr2R 18190821 intron CG33958 - chr2R 18190894 intron CG33958 - chr2R 18190967 intron CG33958 - chr2R_8_18190001 chr2R_18190001 RAL-306_125b 1275 chr2R 18195160 18195222 chr2R 18195291 18195360 6 135 2.0 4.0 3.0 1.5 200 chr2R 18195160 intergenic not near genes chr2R 18195260 intergenic not near genes chr2R 18195360 intergenic not near genes chr2R_6_18195001 chr2R_18195001 RAL-306_125b 1276 chr2R 18210724 18210791 chr2R 18210888 18210947 20 163 6.5 8.0 7.2 2.4 223 chr2R 18210724 5` UTR CR45147 + chr2R 18210836 intergenic CR45147 + chr2R 18210947 intergenic CR45147 + chr2R_20_18210001 chr2R_18210001 RAL-306_125b 1277 chr2R 18260853 18260882 chr2R 18261033 18261071 5 190 5.5 1.5 3.5 1.1 218 chr2R 18260853 intergenic not near genes chr2R 18260962 intergenic not near genes chr2R 18261071 intergenic not near genes chr2R_5_18260001 chr2R_18260001 RAL-306_125b 1278 chr2R 18308239 18308261 chr2R 18308395 18308417 7 155 16.0 6.5 11.2 0.6 178 chr2R 18308239 intron sbb - chr2R 18308328 intron sbb - chr2R 18308417 intron sbb - chr2R_7_18305001 chr2R_18305001 RAL-306_125b 1279 chr2R 18308264 18308313 chr2R 18308390 18308469 14 149 8.0 5.5 6.8 1.8 205 chr2R 18308264 intron sbb - chr2R 18308366 intron sbb - chr2R 18308469 intron sbb - chr2R_14_18305001 chr2R_18305001 RAL-306_125b 1280 chr2R 18318329 18318343 chr2R 18318460 18318474 8 131 0.5 0.0 0.2 6.7 145 chr2R 18318329 intron sbb - chr2R 18318402 intron sbb - chr2R 18318474 intron sbb - chr2R_8_18315001 chr2R_18315001 RAL-306_125b 1281 chr2R 18343448 18343456 chr2R 18343574 18343589 6 132 9.5 10.5 10.0 0.5 141 chr2R 18343448 intron sbb - chr2R 18343518 intron sbb - chr2R 18343589 intron sbb - chr2R_6_18340001 chr2R_18340001 RAL-306_125b 1282 chr2R 18343459 18343462 chr2R 18343570 18343595 6 129 9.0 10.5 9.8 0.6 136 chr2R 18343459 intron sbb - chr2R 18343527 intron sbb - chr2R 18343595 intron sbb - chr2R_6_18340001 chr2R_18340001 RAL-306_125b 1283 chr2R 18358346 18358379 chr2R 18372608 18372641 roo 10 14262 12.0 7.5 9.8 0.9 14295 chr2R 18358346 intergenic not near genes chr2R 18365494 intergenic not near genes chr2R 18372641 intergenic not near genes chr2R_10_18365001 chr2R_18365001 RAL-306_125b 1284 chr2R 18358380 18358402 chr2R 18372599 18372658 roo 6 14253 9.5 5.5 7.5 0.7 14278 chr2R 18358380 intergenic not near genes chr2R 18365519 intergenic not near genes chr2R 18372658 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-306_125b 1285 chr2R 18376688 18376757 chr2R 18376828 18376878 13 136 10.0 8.5 9.2 1.3 190 chr2R 18376688 intergenic not near genes chr2R 18376783 intergenic not near genes chr2R 18376878 intergenic not near genes chr2R_13_18375001 chr2R_18375001 RAL-306_125b 1286 chr2R 18401654 18401656 chr2R 18402408 18402415 4 755 43.5 57.0 50.2 0.1 761 chr2R 18401654 intergenic GstE3 + chr2R 18402034 intergenic not near genes chr2R 18402415 intergenic not near genes chr2R_4_18400001 chr2R_18400001 RAL-306_125b 1287 chr2R 18401652 18401735 chr2R 18402426 18402489 20 757 48.5 51.5 50.0 0.4 837 chr2R 18401652 intergenic GstE3 + chr2R 18402070 intergenic not near genes chr2R 18402489 intergenic not near genes chr2R_20_18400001 chr2R_18400001 RAL-306_125b 1288 chr2R 18405701 18405786 chr2R 18405832 18405916 18 130 5.5 4.0 4.8 3.1 215 chr2R 18405701 intergenic GstE6 +,GstE5 + chr2R 18405808 intergenic GstE6 +,GstE5 + chr2R 18405916 intergenic GstE6 + chr2R_18_18405001 chr2R_18405001 RAL-306_125b 1289 chr2R 18408248 18408307 chr2R 18408411 18408478 18 168 7.0 11.0 9.0 1.8 230 chr2R 18408248 exon GstE8 + chr2R 18408363 exon GstE8 + chr2R 18408478 exon GstE8 + chr2R_18_18405001 chr2R_18405001 RAL-306_125b 1290 chr2R 18463648 18463687 chr2R 18463799 18463838 11 149 10.0 1.5 5.8 1.6 190 chr2R 18463648 intron CG30116 - chr2R 18463743 intron CG30116 - chr2R 18463838 intron CG30116 - chr2R_11_18460001 chr2R_18460001 RAL-306_125b 1291 chr2R 18480409 18480483 chr2R 18480566 18480640 8 157 1.0 1.0 1.0 4.0 231 chr2R 18480409 intron CG30116 - chr2R 18480524 intron CG30116 - chr2R 18480640 intron CG30116 - chr2R_8_18480001 chr2R_18480001 RAL-306_125b 1292 chr2R 18487795 18487847 chr2R 18495291 18495357 blood 22 7499 4.0 5.5 4.8 3.8 7562 chr2R 18487795 intron CG30116 - chr2R 18491576 intron CG30116 - chr2R 18495357 intron CG30116 - chr2R_22_18490001 chr2R_18490001 RAL-306_125b 1293 chr2R 18508530 18508562 chr2R 18508766 18508789 9 240 7.0 4.0 5.5 1.4 259 chr2R 18508530 intergenic not near genes chr2R 18508660 intergenic not near genes chr2R 18508789 intergenic not near genes chr2R_9_18505001 chr2R_18505001 RAL-306_125b 1294 chr2R 18511537 18511611 chr2R 18511674 18511747 16 135 4.5 6.0 5.2 2.6 210 chr2R 18511537 intergenic not near genes chr2R 18511642 intergenic not near genes chr2R 18511747 intergenic not near genes chr2R_16_18510001 chr2R_18510001 RAL-306_125b 1295 chr2R 18513392 18513469 chr2R 18513910 18513981 31 518 5.5 7.0 6.2 4.3 589 chr2R 18513392 intergenic not near genes chr2R 18513686 intergenic not near genes chr2R 18513981 intergenic not near genes chr2R_31_18510001 chr2R_18510001 RAL-306_125b 1296 chr2R 18550529 18550604 chr2R 18550668 18550743 21 137 7.5 9.0 8.2 2.3 214 chr2R 18550529 intergenic not near genes chr2R 18550636 intergenic not near genes chr2R 18550743 intergenic not near genes chr2R_21_18550001 chr2R_18550001 RAL-306_125b 1297 chr2R 18575121 18575165 chr2R 18575370 18575414 17 262 3.5 3.0 3.2 4.0 293 chr2R 18575121 intron GEFmeso - chr2R 18575268 intron GEFmeso - chr2R 18575414 intron GEFmeso - chr2R_17_18575001 chr2R_18575001 RAL-306_125b 1298 chr2R 18575796 18575810 chr2R 18582029 18582048 3S18 6 6237 7.0 9.5 8.2 0.7 6252 chr2R 18575796 intron GEFmeso - chr2R 18578922 intron GEFmeso - chr2R 18582048 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-306_125b 1299 chr2R 18575811 18575823 chr2R 18581988 18582061 3S18 14 6215 5.0 5.0 5.0 2.3 6250 chr2R 18575811 intron GEFmeso - chr2R 18578936 intron GEFmeso - chr2R 18582061 intron GEFmeso - chr2R_14_18575001 chr2R_18575001 RAL-306_125b 1300 chr2R 18590816 18590890 chr2R 18600018 18600092 roo 11 9200 5.5 5.0 5.2 1.8 9276 chr2R 18590816 intron GEFmeso - chr2R 18595454 intron GEFmeso - chr2R 18600092 intron GEFmeso - chr2R_11_18595001 chr2R_18595001 RAL-306_125b 1301 chr2R 18605083 18605157 chr2R 18605225 18605297 23 137 5.0 12.0 8.5 2.4 214 chr2R 18605083 intron GEFmeso - chr2R 18605190 intron GEFmeso - chr2R 18605297 intron GEFmeso - chr2R_23_18605001 chr2R_18605001 RAL-306_125b 1302 chr2R 18738167 18738200 chr2R 18738293 18738326 13 126 0.0 5.5 2.8 3.4 159 chr2R 18738167 intron Hs3st-A + chr2R 18738246 intron Hs3st-A + chr2R 18738326 intron Hs3st-A + chr2R_13_18735001 chr2R_18735001 RAL-306_125b 1303 chr2R 18738202 18738238 chr2R 18738283 18738364 13 122 1.0 4.0 2.5 3.7 162 chr2R 18738202 intron Hs3st-A + chr2R 18738283 intron Hs3st-A + chr2R 18738364 intron Hs3st-A + chr2R_13_18735001 chr2R_18735001 RAL-306_125b 1304 chr2R 18769611 18769732 chr2R 18769922 18769989 7 294 0.0 4.5 2.2 2.2 378 chr2R 18769611 intron Mctp + chr2R 18769800 intron Mctp + chr2R 18769989 intron Mctp + chr2R_7_18765001 chr2R_18765001 RAL-306_125b 1305 chr2R 18782163 18782209 chr2R 18782292 18782310 6 123 10.0 0.0 5.0 1.0 147 chr2R 18782163 intergenic not near genes chr2R 18782236 intergenic not near genes chr2R 18782310 intergenic not near genes chr2R_6_18780001 chr2R_18780001 RAL-306_125b 1306 chr2R 18808120 18808183 chr2R 18808246 18808299 15 124 12.0 3.5 7.8 1.7 179 chr2R 18808120 intergenic CG15096 - chr2R 18808210 intergenic CG15096 - chr2R 18808299 intergenic CG15096 - chr2R_15_18805001 chr2R_18805001 RAL-306_125b 1307 chr2R 18827664 18827723 chr2R 18827794 18827853 19 130 5.0 7.0 6.0 2.7 189 chr2R 18827664 intron CG15097 - chr2R 18827758 intron CG15097 - chr2R 18827853 intron CG15097 - chr2R_19_18825001 chr2R_18825001 RAL-306_125b 1308 chr2R 18862265 18862409 chr2R 18862398 18862545 10 145 0.0 0.0 0.0 10.0 280 chr2R 18862265 intergenic Jheh3 - chr2R 18862405 intergenic Jheh3 -,CG43069 + chr2R 18862545 intergenic CG43069 +,Jheh3 - chr2R_10_18860001 chr2R_18860001 RAL-306_125b 1309 chr2R 18924223 18924296 chr2R 18924353 18924424 15 127 6.5 8.0 7.2 1.8 201 chr2R 18924223 intron sano + chr2R 18924324 intron sano + chr2R 18924424 intron sano + chr2R_15_18920001 chr2R_18920001 RAL-306_125b 1310 chr2R 18926454 18926518 chr2R 18926591 18926655 22 135 7.5 1.0 4.2 4.2 201 chr2R 18926454 intron sano + chr2R 18926554 intron sano + chr2R 18926655 intron sano + chr2R_22_18925001 chr2R_18925001 RAL-306_125b 1311 chr2R 18929072 18929126 chr2R 18929200 18929254 15 126 9.0 9.5 9.2 1.5 182 chr2R 18929072 intron sano + chr2R 18929163 intron sano + chr2R 18929254 intron sano + chr2R_15_18925001 chr2R_18925001 RAL-306_125b 1312 chr2R 18953112 18953143 chr2R 18953249 18953280 11 136 12.5 7.0 9.8 1.0 168 chr2R 18953112 intron sano + chr2R 18953196 intron sano + chr2R 18953280 intron sano + chr2R_11_18950001 chr2R_18950001 RAL-306_125b 1313 chr2R 18953146 18953189 chr2R 18953244 18953326 15 127 6.5 6.5 6.5 2.0 180 chr2R 18953146 intron sano + chr2R 18953236 intron sano + chr2R 18953326 intron sano + chr2R_15_18950001 chr2R_18950001 RAL-306_125b 1314 chr2R 18988972 18989041 chr2R 18989100 18989139 22 126 0.0 3.0 1.5 8.8 167 chr2R 18988972 intron tn + chr2R 18989056 intron tn + chr2R 18989139 intron tn + chr2R_22_18985001 chr2R_18985001 RAL-306_125b 1315 chr2R 19026000 19026057 chr2R 19026151 19026208 16 151 13.0 4.0 8.5 1.7 208 chr2R 19026000 exon 5-HT1B - chr2R 19026104 intron 5-HT1B - chr2R 19026208 intron 5-HT1B - chr2R_16_19025001 chr2R_19025001 RAL-306_125b 1316 chr2R 19039434 19039492 chr2R 19039559 19039611 18 136 2.5 4.0 3.2 4.3 177 chr2R 19039434 intergenic not near genes chr2R 19039522 intergenic not near genes chr2R 19039611 intergenic not near genes chr2R_18_19035001 chr2R_19035001 RAL-306_125b 1317 chr2R 19042661 19042683 chr2R 19042790 19042812 8 127 10.5 8.0 9.2 0.8 151 chr2R 19042661 intergenic not near genes chr2R 19042736 intergenic not near genes chr2R 19042812 intergenic not near genes chr2R_8_19040001 chr2R_19040001 RAL-306_125b 1318 chr2R 19067684 19067752 chr2R 19067810 19067878 11 125 7.5 0.0 3.8 2.3 194 chr2R 19067684 intron 5-HT1A + chr2R 19067781 intron 5-HT1A + chr2R 19067878 intron 5-HT1A + chr2R_11_19065001 chr2R_19065001 RAL-306_125b 1319 chr2R 19103389 19103417 chr2R 19103521 19103549 12 132 11.0 6.0 8.5 1.3 160 chr2R 19103389 intron 5-HT1A + chr2R 19103469 intron 5-HT1A + chr2R 19103549 intron 5-HT1A + chr2R_12_19100001 chr2R_19100001 RAL-306_125b 1320 chr2R 19177827 19177901 chr2R 19177956 19177959 27 119 9.0 0.5 4.8 4.7 132 chr2R 19177827 exon CG10737 + chr2R 19177893 3` UTR CG10737 + chr2R 19177959 3` UTR CG10737 + chr2R_27_19175001 chr2R_19175001 RAL-306_125b 1321 chr2R 19208022 19208083 chr2R 19208163 19208213 19 135 1.5 9.0 5.2 3.1 191 chr2R 19208022 intron hppy + chr2R 19208118 intron hppy + chr2R 19208213 intron hppy + chr2R_19_19205001 chr2R_19205001 RAL-306_125b 1322 chr2R 19296401 19296473 chr2R 19296527 19296599 21 126 7.5 9.0 8.2 2.3 198 chr2R 19296401 intron Tab2 + chr2R 19296500 intron Tab2 + chr2R 19296599 intron Tab2 + chr2R_21_19295001 chr2R_19295001 RAL-306_125b 1323 chr2R 19376085 19376142 chr2R 19376328 19376385 6 242 5.0 7.5 6.2 0.8 300 chr2R 19376085 intron CG10062 + chr2R 19376235 intron CG10062 + chr2R 19376385 intron CG10062 + chr2R_6_19375001 chr2R_19375001 RAL-306_125b 1324 chr2R 19555531 19555605 chr2R 19555665 19555739 21 128 4.0 4.0 4.0 4.2 208 chr2R 19555531 intron sm - chr2R 19555635 intron sm - chr2R 19555739 intron sm - chr2R_21_19555001 chr2R_19555001 RAL-306_125b 1325 chr2R 19575520 19575576 chr2R 19575648 19575704 22 128 11.0 6.5 8.8 2.2 184 chr2R 19575520 intron sm - chr2R 19575612 intron sm - chr2R 19575704 intron sm - chr2R_22_19575001 chr2R_19575001 RAL-306_125b 1326 chr2R 19603923 19603997 chr2R 19604060 19604131 14 134 6.0 8.5 7.2 1.7 208 chr2R 19603923 intron sm - chr2R 19604027 intron sm - chr2R 19604131 intron sm - chr2R_14_19600001 chr2R_19600001 RAL-306_125b 1327 chr2R 19639537 19639599 chr2R 19639663 19639725 27 126 7.5 6.5 7.0 3.4 188 chr2R 19639537 intergenic not near genes chr2R 19639631 intergenic not near genes chr2R 19639725 intergenic not near genes chr2R_27_19635001 chr2R_19635001 RAL-306_125b 1328 chr2R 19644610 19644686 chr2R 19644746 19644815 14 133 3.5 7.5 5.5 2.2 205 chr2R 19644610 intergenic not near genes chr2R 19644712 intergenic not near genes chr2R 19644815 intergenic not near genes chr2R_14_19640001 chr2R_19640001 RAL-306_125b 1329 chr2R 19699857 19699927 chr2R 19699982 19700062 16 134 8.5 7.0 7.8 1.8 205 chr2R 19699857 intergenic Obp56c - chr2R 19699960 intergenic Obp56c - chr2R 19700062 3` UTR Obp56c - chr2R_16_19695001 chr2R_19695001 RAL-306_125b 1330 chr2R 19715815 19715856 chr2R 19723334 19723334 blood 12 7515 11.5 9.0 10.2 1.1 7519 chr2R 19715815 intergenic not near genes chr2R 19719574 intergenic not near genes chr2R 19723334 intergenic not near genes chr2R_12_19715001 chr2R_19715001 RAL-306_125b 1331 chr2R 19773964 19774037 chr2R 19774127 19774200 17 163 9.0 11.0 10.0 1.5 236 chr2R 19773964 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774200 intergenic not near genes chr2R_17_19770001 chr2R_19770001 RAL-306_125b 1332 chr2R 19776566 19776588 chr2R 19779933 19779961 jockey 8 3371 9.5 8.0 8.8 0.8 3395 chr2R 19776566 intergenic not near genes chr2R 19778264 intergenic not near genes chr2R 19779961 intergenic not near genes chr2R_8_19775001 chr2R_19775001 RAL-306_125b 1333 chr2R 19776589 19776615 chr2R 19779920 19779988 jockey 13 3369 6.0 7.0 6.5 1.7 3399 chr2R 19776589 intergenic not near genes chr2R 19778288 intergenic not near genes chr2R 19779988 intergenic not near genes chr2R_13_19775001 chr2R_19775001 RAL-306_125b 1334 chr2R 19801973 19802025 chr2R 19802235 19802287 12 262 5.5 0.5 3.0 3.0 314 chr2R 19801973 intergenic not near genes chr2R 19802130 intergenic not near genes chr2R 19802287 intergenic not near genes chr2R_12_19800001 chr2R_19800001 RAL-306_125b 1335 chr2R 19807624 19807703 chr2R 19807756 19807835 21 132 8.0 5.5 6.8 2.7 211 chr2R 19807624 intergenic not near genes chr2R 19807730 intergenic not near genes chr2R 19807835 intergenic not near genes chr2R_21_19805001 chr2R_19805001 RAL-306_125b 1336 chr2R 19810595 19810652 chr2R 19810765 19810807 10 168 4.5 6.5 5.5 1.5 212 chr2R 19810595 intergenic not near genes chr2R 19810701 intergenic not near genes chr2R 19810807 intergenic not near genes chr2R_10_19810001 chr2R_19810001 RAL-306_125b 1337 chr2R 19914803 19914875 chr2R 19922265 19922337 mdg1 19 7462 3.5 6.5 5.0 3.2 7534 chr2R 19914803 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922337 intergenic not near genes chr2R_19_19915001 chr2R_19915001 RAL-306_125b 1338 chr2R 19957392 19957446 chr2R 19962644 19962698 copia 7 5246 5.5 9.5 7.5 0.8 5306 chr2R 19957392 intergenic CG44623 + chr2R 19960045 intergenic not near genes chr2R 19962698 intergenic not near genes chr2R_7_19960001 chr2R_19960001 RAL-306_125b 1339 chr2R 20008135 20008203 chr2R 20008274 20008342 28 137 12.5 8.5 10.5 2.4 207 chr2R 20008135 intergenic CR44628 + chr2R 20008238 intergenic not near genes chr2R 20008342 intergenic not near genes chr2R_28_20005001 chr2R_20005001 RAL-306_125b 1340 chr2R 20008857 20008919 chr2R 20008981 20009044 9 125 8.0 4.5 6.2 1.2 187 chr2R 20008857 intergenic not near genes chr2R 20008950 intergenic not near genes chr2R 20009044 intergenic not near genes chr2R_9_20005001 chr2R_20005001 RAL-306_125b 1341 chr2R 20012958 20013019 chr2R 20013093 20013154 21 133 13.5 7.5 10.5 1.8 196 chr2R 20012958 intergenic not near genes chr2R 20013056 intergenic not near genes chr2R 20013154 intergenic not near genes chr2R_21_20010001 chr2R_20010001 RAL-306_125b 1342 chr2R 20069208 20069228 chr2R 20071896 20071918 opus 7 2690 0.0 8.5 4.2 1.3 2710 chr2R 20069208 intergenic not near genes chr2R 20070563 intergenic not near genes chr2R 20071918 intergenic not near genes chr2R_7_20070001 chr2R_20070001 RAL-306_125b 1343 chr2R 20069230 20069247 chr2R 20071874 20071932 opus 10 2682 0.0 4.0 2.0 3.3 2702 chr2R 20069230 intergenic not near genes chr2R 20070581 intergenic not near genes chr2R 20071932 intergenic not near genes chr2R_10_20070001 chr2R_20070001 RAL-306_125b 1344 chr2R 20080599 20080625 chr2R 20080726 20080752 4 127 1.5 19.5 10.5 0.3 153 chr2R 20080599 intergenic not near genes chr2R 20080676 intergenic not near genes chr2R 20080752 intergenic not near genes chr2R_4_20080001 chr2R_20080001 RAL-306_125b 1345 chr2R 20125730 20125744 chr2R 20125856 20125870 5 126 9.0 16.0 12.5 0.4 140 chr2R 20125730 intergenic not near genes chr2R 20125800 intergenic not near genes chr2R 20125870 intergenic not near genes chr2R_5_20125001 chr2R_20125001 RAL-306_125b 1346 chr2R 20199170 20199242 chr2R 20199297 20199369 12 126 9.5 10.0 9.8 1.1 199 chr2R 20199170 intergenic not near genes chr2R 20199270 intergenic not near genes chr2R 20199369 intergenic not near genes chr2R_12_20195001 chr2R_20195001 RAL-306_125b 1347 chr2R 20226153 20226177 chr2R 20226292 20226316 9 137 5.0 9.0 7.0 1.1 163 chr2R 20226153 intergenic not near genes chr2R 20226234 intergenic not near genes chr2R 20226316 intergenic not near genes chr2R_9_20225001 chr2R_20225001 RAL-306_125b 1348 chr2R 20334852 20334875 chr2R 20334940 20334956 6 99 6.5 12.5 9.5 0.6 104 chr2R 20334852 intergenic not near genes chr2R 20334904 intergenic not near genes chr2R 20334956 intergenic not near genes chr2R_6_20330001 chr2R_20330001 RAL-306_125b 1349 chr2R 20368469 20368494 chr2R 20377682 20377707 roo 7 9213 17.0 7.5 12.2 0.5 9238 chr2R 20368469 intergenic not near genes chr2R 20373088 intergenic not near genes chr2R 20377707 intergenic not near genes chr2R_7_20370001 chr2R_20370001 RAL-306_125b 1350 chr2R 20379110 20379118 chr2R 20379243 20379251 5 133 10.0 0.0 5.0 0.8 141 chr2R 20379110 intergenic not near genes chr2R 20379180 intergenic not near genes chr2R 20379251 intergenic not near genes chr2R_5_20375001 chr2R_20375001 RAL-306_125b 1351 chr2R 20490014 20490045 chr2R 20490142 20490173 9 128 18.0 2.0 10.0 0.8 159 chr2R 20490014 intergenic not near genes chr2R 20490094 intergenic not near genes chr2R 20490173 intergenic not near genes chr2R_9_20490001 chr2R_20490001 RAL-306_125b 1352 chr2R 20490047 20490080 chr2R 20490138 20490208 14 124 9.0 2.0 5.5 2.2 161 chr2R 20490047 intergenic not near genes chr2R 20490128 intergenic not near genes chr2R 20490208 intergenic not near genes chr2R_14_20490001 chr2R_20490001 RAL-306_125b 1353 chr2R 20502258 20502306 chr2R 20502405 20502470 18 159 4.0 6.0 5.0 3.0 212 chr2R 20502258 intergenic not near genes chr2R 20502364 intergenic not near genes chr2R 20502470 intergenic not near genes chr2R_18_20500001 chr2R_20500001 RAL-306_125b 1354 chr2R 20506909 20506934 chr2R 20507041 20507066 6 132 0.0 6.0 3.0 1.5 157 chr2R 20506909 intergenic CR44645 + chr2R 20506988 intergenic CR44645 + chr2R 20507066 intergenic CR44645 + chr2R_6_20505001 chr2R_20505001 RAL-306_125b 1355 chr2R 20523013 20523065 chr2R 20523154 20523226 9 149 2.0 7.5 4.8 1.6 213 chr2R 20523013 intergenic not near genes chr2R 20523120 intergenic not near genes chr2R 20523226 intergenic not near genes chr2R_9_20520001 chr2R_20520001 RAL-306_125b 1356 chr2R 20555288 20555341 chr2R 20555422 20555481 5 138 0.0 4.5 2.2 1.6 193 chr2R 20555288 intergenic not near genes chr2R 20555384 intergenic not near genes chr2R 20555481 intergenic not near genes chr2R_5_20555001 chr2R_20555001 RAL-306_125b 1357 chr2R 20568363 20568459 chr2R 20568491 20568589 17 127 1.0 1.0 1.0 8.5 226 chr2R 20568363 intron qsm - chr2R 20568476 intron qsm - chr2R 20568589 intron qsm - chr2R_17_20565001 chr2R_20565001 RAL-306_125b 1358 chr2R 20572522 20572581 chr2R 20572662 20572721 10 138 3.5 3.5 3.5 2.2 199 chr2R 20572522 intron qsm - chr2R 20572622 intron qsm - chr2R 20572721 intron qsm - chr2R_10_20570001 chr2R_20570001 RAL-306_125b 1359 chr2R 20695410 20695446 chr2R 20695736 20695775 9 336 8.0 5.0 6.5 1.2 365 chr2R 20695410 intergenic not near genes chr2R 20695592 intergenic not near genes chr2R 20695775 intergenic not near genes chr2R_9_20695001 chr2R_20695001 RAL-306_125b 1360 chr2R 20739397 20739465 chr2R 20744215 20744283 F-element 10 4816 7.5 7.0 7.2 1.2 4886 chr2R 20739397 intron dpr + chr2R 20741840 intron dpr + chr2R 20744283 intron dpr + chr2R_10_20740001 chr2R_20740001 RAL-306_125b 1361 chr2R 20759756 20759812 chr2R 20759882 20759912 5 120 0.0 6.0 3.0 1.2 156 chr2R 20759756 intergenic not near genes chr2R 20759834 intergenic not near genes chr2R 20759912 intergenic not near genes chr2R_5_20755001 chr2R_20755001 RAL-306_125b 1362 chr2R 20776509 20776540 chr2R 20776636 20776667 10 127 13.0 1.0 7.0 1.2 158 chr2R 20776509 intergenic CG43709 -,CG43710 - chr2R 20776588 intergenic CG43710 -,CG43709 - chr2R 20776667 intergenic CG43710 -,CG43709 - chr2R_10_20775001 chr2R_20775001 RAL-306_125b 1363 chr2R 20783264 20783309 chr2R 20788086 20788131 F-element 18 4821 9.5 7.5 8.5 1.9 4867 chr2R 20783264 intergenic not near genes chr2R 20785698 intergenic not near genes chr2R 20788131 intergenic CG43666 - chr2R_18_20785001 chr2R_20785001 RAL-306_125b 1364 chr2R 20838060 20838079 chr2R 20838191 20838210 10 131 0.0 15.5 7.8 1.1 150 chr2R 20838060 intron CR44667 + chr2R 20838135 intron CR44667 + chr2R 20838210 intron CR44667 + chr2R_10_20835001 chr2R_20835001 RAL-306_125b 1365 chr2R 20862280 20862349 chr2R 20862424 20862467 15 141 7.0 7.5 7.2 1.8 187 chr2R 20862280 intergenic not near genes chr2R 20862374 intergenic not near genes chr2R 20862467 intergenic not near genes chr2R_15_20860001 chr2R_20860001 RAL-306_125b 1366 chr2R 20863068 20863132 chr2R 20863204 20863268 18 131 6.0 4.5 5.2 2.9 200 chr2R 20863068 intergenic not near genes chr2R 20863168 intergenic not near genes chr2R 20863268 intergenic not near genes chr2R_18_20860001 chr2R_20860001 RAL-306_125b 1367 chr2R 20912287 20912351 chr2R 20912421 20912471 15 134 9.5 13.5 11.5 1.2 184 chr2R 20912287 intergenic not near genes chr2R 20912379 intergenic not near genes chr2R 20912471 intergenic not near genes chr2R_15_20910001 chr2R_20910001 RAL-306_125b 1368 chr2R 20942344 20942356 chr2R 20942477 20942489 4 133 0.0 8.0 4.0 0.8 145 chr2R 20942344 intergenic not near genes chr2R 20942416 intergenic not near genes chr2R 20942489 intergenic not near genes chr2R_4_20940001 chr2R_20940001 RAL-306_125b 1369 chr2R 20962868 20962935 chr2R 20963016 20963083 25 146 2.5 6.0 4.2 4.8 215 chr2R 20962868 intergenic not near genes chr2R 20962976 intergenic not near genes chr2R 20963083 intergenic not near genes chr2R_25_20960001 chr2R_20960001 RAL-306_125b 1370 chr2R 20966976 20967055 chr2R 20967103 20967182 14 125 4.5 1.5 3.0 3.5 206 chr2R 20966976 intergenic not near genes chr2R 20967079 intergenic not near genes chr2R 20967182 intergenic not near genes chr2R_14_20965001 chr2R_20965001 RAL-306_125b 1371 chr2R 21057442 21057516 chr2R 21057573 21057651 10 134 6.5 2.0 4.2 1.9 209 chr2R 21057442 intergenic shg -,cpa + chr2R 21057546 intergenic cpa +,shg - chr2R 21057651 intergenic cpa +,shg - chr2R_10_21055001 chr2R_21055001 RAL-306_125b 1372 chr2R 21080259 21080277 chr2R 21080387 21080395 10 126 10.5 2.0 6.2 1.4 136 chr2R 21080259 intron Treh + chr2R 21080327 intron Treh + chr2R 21080395 intron Treh + chr2R_10_21080001 chr2R_21080001 RAL-306_125b 1373 chr2R 21082902 21082971 chr2R 21083036 21083105 25 129 11.0 9.0 10.0 2.3 203 chr2R 21082902 intron Treh + chr2R 21083004 intron Treh + chr2R 21083105 intron Treh + chr2R_25_21080001 chr2R_21080001 RAL-306_125b 1374 chr2R 21113617 21113670 chr2R 21113745 21113803 11 130 14.0 1.0 7.5 1.3 186 chr2R 21113617 intron ktub + chr2R 21113710 intron ktub + chr2R 21113803 intron ktub + chr2R_11_21110001 chr2R_21110001 RAL-306_125b 1375 chr2R 21151096 21151146 chr2R 21153758 21153829 opus 20 2675 0.5 6.5 3.5 4.4 2733 chr2R 21151096 intron CG30389 - chr2R 21152462 intron CG30389 - chr2R 21153829 intron CG30389 - chr2R_20_21150001 chr2R_21150001 RAL-306_125b 1376 chr2R 21158844 21158913 chr2R 21159018 21159087 17 174 5.0 9.5 7.2 2.1 243 chr2R 21158844 intron CG30389 - chr2R 21158966 intron CG30389 - chr2R 21159087 intron CG30389 - chr2R_17_21155001 chr2R_21155001 RAL-306_125b 1377 chr2R 21182917 21182942 chr2R 21183192 21183216 7 274 2.5 16.5 9.5 0.7 299 chr2R 21182917 intergenic Pu +,tud + chr2R 21183066 intergenic tud +,Pu + chr2R 21183216 intergenic tud + chr2R_7_21180001 chr2R_21180001 RAL-306_125b 1378 chr2R 21193955 21194032 chr2R 21194090 21194167 20 133 6.0 12.5 9.2 2.0 212 chr2R 21193955 intron Lapsyn + chr2R 21194061 intron Lapsyn + chr2R 21194167 intron Lapsyn + chr2R_20_21190001 chr2R_21190001 RAL-306_125b 1379 chr2R 21258453 21258498 chr2R 21258581 21258615 11 120 0.0 12.0 6.0 1.6 162 chr2R 21258453 intron Rgk3 + chr2R 21258534 intron Rgk3 + chr2R 21258615 intron Rgk3 + chr2R_11_21255001 chr2R_21255001 RAL-306_125b 1380 chr2R 21285383 21285424 chr2R 21285510 21285551 10 126 12.0 10.5 11.2 0.8 168 chr2R 21285383 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285467 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285551 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_10_21285001 chr2R_21285001 RAL-306_125b 1381 chr2R 21322906 21322942 chr2R 21323040 21323071 4 133 7.5 10.0 8.8 0.4 165 chr2R 21322906 5` UTR CG30394 - chr2R 21322988 5` UTR CG30394 - chr2R 21323071 intron CG30394 - chr2R_4_21320001 chr2R_21320001 RAL-306_125b 1382 chr2R 21363106 21363180 chr2R 21363239 21363308 6 130 0.0 1.0 0.5 4.0 202 chr2R 21363106 intron cv-2 - chr2R 21363207 intron cv-2 - chr2R 21363308 intron cv-2 - chr2R_6_21360001 chr2R_21360001 RAL-306_125b 1383 chr2R 21417228 21417235 chr2R 21417380 21417387 6 150 11.5 0.0 5.8 0.9 159 chr2R 21417228 intron Sdc - chr2R 21417308 intron Sdc - chr2R 21417387 intron Sdc - chr2R_6_21415001 chr2R_21415001 RAL-306_125b 1384 chr2R 21421288 21421353 chr2R 21421417 21421482 24 127 10.0 4.0 7.0 3.0 194 chr2R 21421288 intron Sdc - chr2R 21421385 intron Sdc - chr2R 21421482 intron Sdc - chr2R_24_21420001 chr2R_21420001 RAL-306_125b 1385 chr2R 21440281 21440289 chr2R 21440659 21440667 4 378 8.5 18.0 13.2 0.3 386 chr2R 21440281 intron Sdc - chr2R 21440474 intron Sdc - chr2R 21440667 intron Sdc - chr2R_4_21440001 chr2R_21440001 RAL-306_125b 1386 chr2R 21469898 21469971 chr2R 21470036 21470076 17 130 4.0 6.0 5.0 2.8 178 chr2R 21469898 intron Sdc - chr2R 21469987 intron Sdc - chr2R 21470076 intron Sdc - chr2R_17_21465001 chr2R_21465001 RAL-306_125b 1387 chr2R 21540658 21540684 chr2R 21540926 21540952 8 268 14.5 6.5 10.5 0.7 294 chr2R 21540658 intron Egfr + chr2R 21540805 intron Egfr + chr2R 21540952 intron Egfr + chr2R_8_21540001 chr2R_21540001 RAL-306_125b 1388 chr2R 21546738 21546814 chr2R 21546869 21546879 11 113 5.0 6.0 5.5 1.7 141 chr2R 21546738 intron Egfr + chr2R 21546808 intron Egfr + chr2R 21546879 intron Egfr + chr2R_11_21545001 chr2R_21545001 RAL-306_125b 1389 chr2R 21613325 21613361 chr2R 21613453 21613490 5 129 4.5 7.0 5.8 0.7 165 chr2R 21613325 intergenic CG15673 - chr2R 21613408 intergenic CG15673 -,CG18870 - chr2R 21613490 intergenic CG18870 -,CG15673 - chr2R_5_21610001 chr2R_21610001 RAL-306_125b 1390 chr2R 21697488 21697521 chr2R 21697632 21697637 11 141 3.0 7.0 5.0 1.8 149 chr2R 21697488 intergenic CngB - chr2R 21697562 intergenic CngB -,HmgZ - chr2R 21697637 intergenic HmgZ -,CngB - chr2R_11_21695001 chr2R_21695001 RAL-306_125b 1391 chr2R 21710893 21710961 chr2R 21711040 21711108 20 145 5.5 10.5 8.0 2.2 215 chr2R 21710893 intron,intron HmgD +,CG30403 - chr2R 21711000 intron,intron HmgD +,CG30403 - chr2R 21711108 intron,intron HmgD +,CG30403 - chr2R_20_21710001 chr2R_21710001 RAL-306_125b 1392 chr2R 21721528 21721602 chr2R 21721666 21721733 22 134 9.0 0.0 4.5 4.0 205 chr2R 21721528 intron LBR + chr2R 21721630 intron LBR + chr2R 21721733 intron LBR + chr2R_22_21720001 chr2R_21720001 RAL-306_125b 1393 chr2R 21725180 21725221 chr2R 21725307 21725348 18 127 0.0 9.0 4.5 3.3 168 chr2R 21725180 intergenic not near genes chr2R 21725264 intergenic not near genes chr2R 21725348 intergenic not near genes chr2R_18_21725001 chr2R_21725001 RAL-306_125b 1394 chr2R 21726669 21726679 chr2R 21726843 21726860 5 179 9.5 8.5 9.0 0.5 191 chr2R 21726669 intergenic not near genes chr2R 21726764 intergenic not near genes chr2R 21726860 intergenic not near genes chr2R_5_21725001 chr2R_21725001 RAL-306_125b 1395 chr2R 21738287 21738304 chr2R 21747447 21747514 roo 6 9177 2.5 4.5 3.5 1.3 9227 chr2R 21738287 intergenic not near genes chr2R 21742900 intergenic not near genes chr2R 21747514 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-306_125b 1396 chr2R 21753040 21753058 chr2R 21753575 21753593 roo 8 534 11.5 14.5 13.0 0.6 553 chr2R 21753040 intergenic not near genes chr2R 21753316 intergenic not near genes chr2R 21753593 intergenic not near genes chr2R_8_21750001 chr2R_21750001 RAL-306_125b 1397 chr2R 21753063 21753109 chr2R 21753567 21753634 roo 12 532 6.0 12.0 9.0 1.2 571 chr2R 21753063 intergenic not near genes chr2R 21753348 intergenic not near genes chr2R 21753634 intergenic not near genes chr2R_12_21750001 chr2R_21750001 RAL-306_125b 1398 chr2R 21759509 21759589 chr2R 21759646 21759726 16 129 6.0 5.5 5.8 2.4 217 chr2R 21759509 intergenic not near genes chr2R 21759618 intergenic not near genes chr2R 21759726 intergenic not near genes chr2R_16_21755001 chr2R_21755001 RAL-306_125b 1399 chr2R 21769575 21769579 chr2R 21769870 21769874 4 295 25.5 10.5 18.0 0.2 299 chr2R 21769575 exon CG30395 + chr2R 21769724 intron CG30395 + chr2R 21769874 exon CG30395 + chr2R_4_21765001 chr2R_21765001 RAL-306_125b 1400 chr2R 21777393 21777416 chr2R 21777526 21777549 12 133 11.5 7.5 9.5 1.1 156 chr2R 21777393 intergenic not near genes chr2R 21777471 intergenic not near genes chr2R 21777549 intergenic not near genes chr2R_12_21775001 chr2R_21775001 RAL-306_125b 1401 chr2R 21777420 21777443 chr2R 21777525 21777576 8 128 7.5 7.0 7.2 1.0 156 chr2R 21777420 intergenic not near genes chr2R 21777498 intergenic not near genes chr2R 21777576 intergenic not near genes chr2R_8_21775001 chr2R_21775001 RAL-306_125b 1402 chr2R 21797285 21797292 chr2R 21797415 21797422 5 130 13.5 11.5 12.5 0.4 137 chr2R 21797285 intergenic CG34204 + chr2R 21797354 intergenic CG34204 + chr2R 21797422 intergenic CG34204 + chr2R_5_21795001 chr2R_21795001 RAL-306_125b 1403 chr2R 21797295 21797340 chr2R 21797414 21797470 12 129 6.0 11.5 8.8 1.2 175 chr2R 21797295 intergenic CG34204 + chr2R 21797382 intergenic CG34204 + chr2R 21797470 intergenic not near genes chr2R_12_21795001 chr2R_21795001 RAL-306_125b 1404 chr2R 21802382 21802451 chr2R 21802523 21802592 14 140 2.5 5.5 4.0 2.8 210 chr2R 21802382 intergenic not near genes chr2R 21802487 intergenic not near genes chr2R 21802592 intergenic not near genes chr2R_14_21800001 chr2R_21800001 RAL-306_125b 1405 chr2R 21809481 21809547 chr2R 21817771 21817806 roo 23 8288 13.5 10.0 11.8 1.8 8325 chr2R 21809481 intergenic not near genes chr2R 21813644 intergenic not near genes chr2R 21817806 intergenic not near genes chr2R_23_21810001 chr2R_21810001 RAL-306_125b 1406 chr2R 21857317 21857366 chr2R 21857447 21857507 13 137 8.5 11.5 10.0 1.2 190 chr2R 21857317 intergenic not near genes chr2R 21857412 intergenic not near genes chr2R 21857507 intergenic not near genes chr2R_13_21855001 chr2R_21855001 RAL-306_125b 1407 chr2R 21888275 21888321 chr2R 21888416 21888445 12 139 3.5 12.0 7.8 1.4 170 chr2R 21888275 intron Fili + chr2R 21888360 intron Fili + chr2R 21888445 intron Fili + chr2R_12_21885001 chr2R_21885001 RAL-306_125b 1408 chr2R 21906222 21906299 chr2R 21906373 21906450 12 151 3.5 3.0 3.2 2.9 228 chr2R 21906222 intron Fili + chr2R 21906336 intron Fili + chr2R 21906450 intron Fili + chr2R_12_21905001 chr2R_21905001 RAL-306_125b 1409 chr2R 21919831 21919899 chr2R 21919969 21920037 23 136 5.5 9.0 7.2 2.8 206 chr2R 21919831 intron Fili + chr2R 21919934 intron Fili + chr2R 21920037 intron Fili + chr2R_23_21915001 chr2R_21915001 RAL-306_125b 1410 chr2R 21920894 21920921 chr2R 21921022 21921049 11 128 6.0 9.5 7.8 1.2 155 chr2R 21920894 intron Fili + chr2R 21920972 intron Fili + chr2R 21921049 intron Fili + chr2R_11_21920001 chr2R_21920001 RAL-306_125b 1411 chr2R 21946728 21946803 chr2R 21946874 21946892 29 144 3.0 8.0 5.5 4.5 164 chr2R 21946728 intergenic Fili + chr2R 21946810 intergenic not near genes chr2R 21946892 intergenic not near genes chr2R_29_21945001 chr2R_21945001 RAL-306_125b 1412 chr2R 22012950 22013003 chr2R 22013095 22013148 17 145 6.5 12.0 9.2 1.7 198 chr2R 22012950 intron CG34370 - chr2R 22013049 intron CG34370 - chr2R 22013148 intron CG34370 - chr2R_17_22010001 chr2R_22010001 RAL-306_125b 1413 chr2R 22029430 22029498 chr2R 22029618 22029686 15 188 8.0 6.5 7.2 1.8 256 chr2R 22029430 intron CG34370 - chr2R 22029558 intron CG34370 - chr2R 22029686 intron CG34370 - chr2R_15_22025001 chr2R_22025001 RAL-306_125b 1414 chr2R 22099858 22099929 chr2R 22099987 22100058 13 129 2.0 10.5 6.2 1.8 200 chr2R 22099858 intergenic CG11073 - chr2R 22099958 intergenic CG11073 - chr2R 22100058 intergenic not near genes chr2R_13_22095001 chr2R_22095001 RAL-306_125b 1415 chr2R 22132249 22132284 chr2R 22132379 22132414 16 129 8.5 7.0 7.8 1.8 165 chr2R 22132249 intergenic not near genes chr2R 22132332 intergenic not near genes chr2R 22132414 intergenic not near genes chr2R_16_22130001 chr2R_22130001 RAL-306_125b 1416 chr2R 22151846 22151911 chr2R 22151967 22152037 15 122 7.5 10.5 9.0 1.5 191 chr2R 22151846 intron a + chr2R 22151942 intron a + chr2R 22152037 intron a + chr2R_15_22150001 chr2R_22150001 RAL-306_125b 1417 chr2R 22178711 22178730 chr2R 22178848 22178867 9 137 10.0 7.5 8.8 0.9 156 chr2R 22178711 intron CG11170 - chr2R 22178789 intron CG11170 - chr2R 22178867 intron CG11170 - chr2R_9_22175001 chr2R_22175001 RAL-306_125b 1418 chr2R 22178733 22178774 chr2R 22178846 22178910 7 133 0.0 7.5 3.8 1.5 177 chr2R 22178733 intron CG11170 - chr2R 22178822 intron CG11170 - chr2R 22178910 intron CG11170 - chr2R_7_22175001 chr2R_22175001 RAL-306_125b 1419 chr2R 22182865 22182937 chr2R 22182999 22183071 20 133 4.5 7.5 6.0 2.9 206 chr2R 22182865 5` UTR CG11170 - chr2R 22182968 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183071 intergenic MED16 +,CG11170 -,CG11275 + chr2R_20_22180001 chr2R_22180001 RAL-306_125b 1420 chr2R 22248798 22248868 chr2R 22248925 22248990 27 123 6.0 3.0 4.5 4.9 192 chr2R 22248798 intron dve + chr2R 22248894 intron dve + chr2R 22248990 intron dve + chr2R_27_22245001 chr2R_22245001 RAL-306_125b 1421 chr2R 22290032 22290066 chr2R 22290166 22290190 10 132 18.0 7.5 12.8 0.7 158 chr2R 22290032 intergenic not near genes chr2R 22290111 intergenic not near genes chr2R 22290190 intergenic not near genes chr2R_10_22290001 chr2R_22290001 RAL-306_125b 1422 chr2R 22349651 22349657 chr2R 22351485 22351491 jockey 4 1834 12.5 11.5 12.0 0.3 1840 chr2R 22349651 intron Liprin-gamma - chr2R 22350571 intron Liprin-gamma - chr2R 22351491 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-306_125b 1423 chr2R 22349671 22349712 chr2R 22351480 22351546 jockey 18 1832 6.5 11.0 8.8 1.8 1875 chr2R 22349671 intron Liprin-gamma - chr2R 22350608 intron Liprin-gamma - chr2R 22351546 intron Liprin-gamma - chr2R_18_22350001 chr2R_22350001 RAL-306_125b 1424 chr2R 22362614 22362685 chr2R 22362743 22362813 27 127 6.5 7.5 7.0 3.4 199 chr2R 22362614 intron Liprin-gamma - chr2R 22362714 intron Liprin-gamma - chr2R 22362813 intron Liprin-gamma - chr2R_27_22360001 chr2R_22360001 RAL-306_125b 1425 chr2R 22370736 22370774 chr2R 22370868 22370906 11 131 5.0 0.0 2.5 3.1 170 chr2R 22370736 intron Liprin-gamma - chr2R 22370821 intron Liprin-gamma - chr2R 22370906 intron Liprin-gamma - chr2R_11_22370001 chr2R_22370001 RAL-306_125b 1426 chr2R 22380315 22380392 chr2R 22380456 22380533 12 141 6.0 0.0 3.0 3.0 218 chr2R 22380315 intron wrapper + chr2R 22380424 intron wrapper + chr2R 22380533 intron wrapper + chr2R_12_22380001 chr2R_22380001 RAL-306_125b 1427 chr2R 22420605 22420678 chr2R 22420740 22420808 10 134 0.0 4.5 2.2 3.1 203 chr2R 22420605 intergenic mRpS29 -,rad50 + chr2R 22420706 intergenic rad50 +,mRpS29 - chr2R 22420808 intergenic rad50 +,mRpS29 - chr2R_10_22420001 chr2R_22420001 RAL-306_125b 1428 chr2R 22460334 22460404 chr2R 22460463 22460533 26 129 4.5 10.5 7.5 3.1 199 chr2R 22460334 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460533 intron CG10384 + chr2R_26_22460001 chr2R_22460001 RAL-306_125b 1429 chr2R 22465278 22465312 chr2R 22465521 22465555 BS 20 242 14.0 6.0 10.0 1.8 277 chr2R 22465278 intron CG10384 + chr2R 22465416 intron CG10384 + chr2R 22465555 intron CG10384 + chr2R_20_22465001 chr2R_22465001 RAL-306_125b 1430 chr2R 22499854 22499875 chr2R 22499980 22500001 4 126 1.5 21.5 11.5 0.3 147 chr2R 22499854 intron px - chr2R 22499928 intron px - chr2R 22500001 intron px - chr2R_4_22495001 chr2R_22495001 RAL-306_125b 1431 chr2R 22525713 22525722 chr2R 22529318 22529327 jockey 4 3605 15.5 6.5 11.0 0.3 3614 chr2R 22525713 intron px - chr2R 22527520 intron px - chr2R 22529327 intron px - chr2R_4_22525001 chr2R_22525001 RAL-306_125b 1432 chr2R 22525724 22525769 chr2R 22529314 22529373 jockey 15 3601 8.0 6.5 7.2 1.8 3649 chr2R 22525724 intron px - chr2R 22527548 intron px - chr2R 22529373 intron px - chr2R_15_22525001 chr2R_22525001 RAL-306_125b 1433 chr2R 22575625 22575653 chr2R 22575747 22575782 6 128 6.5 6.0 6.2 0.8 157 chr2R 22575625 intron dnr1 - chr2R 22575704 intron dnr1 - chr2R 22575782 intron dnr1 - chr2R_6_22575001 chr2R_22575001 RAL-306_125b 1434 chr2R 22575655 22575691 chr2R 22575738 22575818 13 118 4.5 5.0 4.8 2.2 163 chr2R 22575655 intron dnr1 - chr2R 22575736 intron dnr1 - chr2R 22575818 intron dnr1 - chr2R_13_22575001 chr2R_22575001 RAL-306_125b 1435 chr2R 22580388 22580445 chr2R 22586582 22586639 diver 16 6193 5.5 9.5 7.5 1.9 6251 chr2R 22580388 intron dnr1 - chr2R 22583514 intron dnr1 - chr2R 22586639 intron dnr1 - chr2R_16_22580001 chr2R_22580001 RAL-306_125b 1436 chr2R 22620786 22620856 chr2R 22620936 22621001 22 146 6.5 7.5 7.0 2.8 215 chr2R 22620786 5` UTR CG33143 + chr2R 22620894 5` UTR CG33143 + chr2R 22621001 5` UTR CG33143 + chr2R_22_22620001 chr2R_22620001 RAL-306_125b 1437 chr2R 22623406 22623467 chr2R 22623596 22623657 20 189 2.0 12.0 7.0 2.5 251 chr2R 22623406 intron CG33143 + chr2R 22623532 intron CG33143 + chr2R 22623657 intron CG33143 + chr2R_20_22620001 chr2R_22620001 RAL-306_125b 1438 chr2R 22679701 22679732 chr2R 22679828 22679850 6 120 12.5 2.5 7.5 0.7 149 chr2R 22679701 intergenic not near genes chr2R 22679776 intergenic not near genes chr2R 22679850 intergenic not near genes chr2R_6_22675001 chr2R_22675001 RAL-306_125b 1439 chr2R 22679734 22679771 chr2R 22679826 22679859 5 97 7.0 3.0 5.0 0.8 125 chr2R 22679734 intergenic not near genes chr2R 22679796 intergenic not near genes chr2R 22679859 intergenic not near genes chr2R_5_22675001 chr2R_22675001 RAL-306_125b 1440 chr2R 22756505 22756574 chr2R 22756632 22756701 23 123 10.5 8.0 9.2 2.3 196 chr2R 22756505 intron,5` UTR CG42260 -,CR30267 + chr2R 22756603 intron,intron CG42260 -,CR30267 + chr2R 22756701 intron,intron CG42260 -,CR30267 + chr2R_23_22755001 chr2R_22755001 RAL-306_125b 1441 chr2R 22774919 22774996 chr2R 22775388 22775442 jockey 21 467 7.5 10.0 8.8 2.1 523 chr2R 22774919 intron CG42260 - chr2R 22775180 intron CG42260 - chr2R 22775442 intron CG42260 - chr2R_21_22775001 chr2R_22775001 RAL-306_125b 1442 chr2R 22789785 22789838 chr2R 22790121 22790174 13 334 3.5 8.5 6.0 1.9 389 chr2R 22789785 intron CG42260 - chr2R 22789980 intron CG42260 - chr2R 22790174 intron CG42260 - chr2R_13_22785001 chr2R_22785001 RAL-306_125b 1443 chr2R 22843016 22843046 chr2R 22845032 22845062 flea 8 2016 6.5 6.0 6.2 1.1 2046 chr2R 22843016 intergenic CG9826 + chr2R 22844039 intergenic not near genes chr2R 22845062 intergenic not near genes chr2R_8_22840001 chr2R_22840001 RAL-306_125b 1444 chr2R 22846863 22846939 chr2R 22846990 22847066 6 117 2.0 2.5 2.2 1.9 203 chr2R 22846863 intron CG3649 + chr2R 22846964 exon CG3649 + chr2R 22847066 exon CG3649 + chr2R_6_22845001 chr2R_22845001 RAL-306_125b 1445 chr2R 22907365 22907432 chr2R 22907500 22907540 9 123 6.5 3.5 5.0 1.5 175 chr2R 22907365 intron nahoda + chr2R 22907452 intron nahoda + chr2R 22907540 intron nahoda + chr2R_9_22905001 chr2R_22905001 RAL-306_125b 1446 chr2R 22945014 22945084 chr2R 22945178 22945247 28 163 8.5 11.5 10.0 2.5 233 chr2R 22945014 exon CG42694 + chr2R 22945130 3` UTR CG42694 + chr2R 22945247 intergenic CG42694 + chr2R_28_22945001 chr2R_22945001 RAL-306_125b 1447 chr2R 22953373 22953381 chr2R 22953517 22953525 5 144 7.5 6.5 7.0 0.6 152 chr2R 22953373 intron CR32835 - chr2R 22953449 3` UTR CR32835 - chr2R 22953525 3` UTR CR32835 - chr2R_5_22950001 chr2R_22950001 RAL-306_125b 1448 chr2R 22957700 22957763 chr2R 22957832 22957893 17 132 13.0 4.5 8.8 1.7 193 chr2R 22957700 intergenic CR44780 - chr2R 22957796 intergenic CR44780 - chr2R 22957893 intergenic not near genes chr2R_17_22955001 chr2R_22955001 RAL-306_125b 1449 chr2R 22958782 22958813 chr2R 22963893 22963896 flea 8 5123 6.0 8.5 7.2 1.0 5114 chr2R 22958782 intergenic not near genes chr2R 22961339 intergenic not near genes chr2R 22963896 intergenic not near genes chr2R_8_22960001 chr2R_22960001 RAL-306_125b 1450 chr2R 22988266 22988314 chr2R 22988397 22988445 11 126 12.0 6.5 9.2 1.1 179 chr2R 22988266 intron twi + chr2R 22988356 intron twi + chr2R 22988445 intron twi + chr2R_11_22985001 chr2R_22985001 RAL-306_125b 1451 chr2R 23000103 23000159 chr2R 23000226 23000289 31 128 8.0 10.5 9.2 3.0 186 chr2R 23000103 intron twi + chr2R 23000196 intron twi + chr2R 23000289 intron twi + chr2R_31_23000001 chr2R_23000001 RAL-306_125b 1452 chr2R 23052617 23052676 chr2R 23052743 23052801 22 125 8.0 6.5 7.2 2.7 184 chr2R 23052617 intergenic not near genes chr2R 23052709 intergenic not near genes chr2R 23052801 intergenic not near genes chr2R_22_23050001 chr2R_23050001 RAL-306_125b 1453 chr2R 23061723 23061779 chr2R 23061867 23061923 19 141 2.5 7.5 5.0 3.2 200 chr2R 23061723 3` UTR l(2)06496 - chr2R 23061823 3` UTR l(2)06496 - chr2R 23061923 3` UTR l(2)06496 - chr2R_19_23060001 chr2R_23060001 RAL-306_125b 1454 chr2R 23070371 23070437 chr2R 23070515 23070578 21 142 6.0 6.5 6.2 2.9 207 chr2R 23070371 intron l(2)k09913 + chr2R 23070474 intron l(2)k09913 + chr2R 23070578 intron l(2)k09913 + chr2R_21_23070001 chr2R_23070001 RAL-306_125b 1455 chr2R 23077588 23077660 chr2R 23079915 23079986 27 2328 29.5 45.0 37.2 0.7 2398 chr2R 23077588 exon Art7 - chr2R 23078787 exon Art7 - chr2R 23079986 intergenic CG43659 - chr2R_27_23075001 chr2R_23075001 RAL-306_125b 1456 chr2R 23119557 23119620 chr2R 23119684 23119747 15 125 7.0 12.5 9.8 1.4 190 chr2R 23119557 intergenic not near genes chr2R 23119652 intergenic not near genes chr2R 23119747 intergenic not near genes chr2R_15_23115001 chr2R_23115001 RAL-306_125b 1457 chr2R 23134815 23134844 chr2R 23134920 23134964 12 125 6.5 10.0 8.2 1.3 149 chr2R 23134815 intergenic not near genes chr2R 23134890 intergenic not near genes chr2R 23134964 intergenic not near genes chr2R_12_23130001 chr2R_23130001 RAL-306_125b 1458 chr2R 23186526 23186593 chr2R 23186654 23186721 25 125 7.0 8.0 7.5 2.9 195 chr2R 23186526 intron CG34371 - chr2R 23186624 intron CG34371 - chr2R 23186721 intron CG34371 - chr2R_25_23185001 chr2R_23185001 RAL-306_125b 1459 chr2R 23188512 23188580 chr2R 23188639 23188708 25 128 10.5 10.5 10.5 2.2 196 chr2R 23188512 intron CG34371 - chr2R 23188610 intron CG34371 - chr2R 23188708 intron CG34371 - chr2R_25_23185001 chr2R_23185001 RAL-306_125b 1460 chr2R 23231915 23231984 chr2R 23232086 23232151 14 170 4.5 4.0 4.2 2.7 236 chr2R 23231915 intergenic not near genes chr2R 23232033 intergenic not near genes chr2R 23232151 intergenic CG3092 + chr2R_14_23230001 chr2R_23230001 RAL-306_125b 1461 chr2R 23236782 23236848 chr2R 23236930 23236992 10 144 1.5 5.0 3.2 2.4 210 chr2R 23236782 intergenic not near genes chr2R 23236887 intergenic not near genes chr2R 23236992 intergenic not near genes chr2R_10_23235001 chr2R_23235001 RAL-306_125b 1462 chr2R 23291278 23291316 chr2R 23291406 23291443 13 127 7.5 0.0 3.8 2.7 165 chr2R 23291278 3` UTR CR44783 - chr2R 23291360 3` UTR CR44783 - chr2R 23291443 intergenic CR44783 - chr2R_13_23290001 chr2R_23290001 RAL-306_125b 1463 chr2R 23315342 23315399 chr2R 23315565 23315621 13 214 5.0 4.0 4.5 2.4 279 chr2R 23315342 intergenic not near genes chr2R 23315482 intergenic not near genes chr2R 23315621 intergenic not near genes chr2R_13_23315001 chr2R_23315001 RAL-306_125b 1464 chr2R 23402578 23402641 chr2R 23407704 23407738 flea 24 5124 7.0 11.5 9.2 2.4 5160 chr2R 23402578 intergenic CG3520 - chr2R 23405158 intergenic not near genes chr2R 23407738 intergenic not near genes chr2R_24_23405001 chr2R_23405001 RAL-306_125b 1465 chr2R 23407928 23407998 chr2R 23408223 23408273 20 294 3.0 6.0 4.5 3.6 345 chr2R 23407928 intergenic not near genes chr2R 23408100 intergenic not near genes chr2R 23408273 intergenic not near genes chr2R_20_23405001 chr2R_23405001 RAL-306_125b 1466 chr2R 23421309 23421387 chr2R 23421449 23421527 27 140 7.0 7.5 7.2 3.3 218 chr2R 23421309 intergenic CG9815 - chr2R 23421418 intergenic CG9815 - chr2R 23421527 3` UTR CG9815 - chr2R_27_23420001 chr2R_23420001 RAL-306_125b 1467 chr2R 23429037 23429087 chr2R 23429245 23429295 26 207 8.5 6.5 7.5 3.1 258 chr2R 23429037 intron CG9815 - chr2R 23429166 intron CG9815 - chr2R 23429295 intron CG9815 - chr2R_26_23425001 chr2R_23425001 RAL-306_125b 1468 chr2R 23437189 23437228 chr2R 23437316 23437338 8 122 9.5 8.5 9.0 0.8 149 chr2R 23437189 intergenic not near genes chr2R 23437264 intergenic not near genes chr2R 23437338 intergenic not near genes chr2R_8_23435001 chr2R_23435001 RAL-306_125b 1469 chr2R 23475667 23475673 chr2R 23475796 23475802 5 129 7.5 5.0 6.2 0.7 135 chr2R 23475667 intron CG43795 + chr2R 23475734 intron,3` UTR CG43795 +,CG13557 - chr2R 23475802 intron,3` UTR CG43795 +,CG13557 - chr2R_5_23475001 chr2R_23475001 RAL-306_125b 1470 chr2R 23508869 23508941 chr2R 23509036 23509108 36 166 4.5 4.5 4.5 6.5 239 chr2R 23508869 intergenic not near genes chr2R 23508988 intergenic not near genes chr2R 23509108 intergenic not near genes chr2R_36_23505001 chr2R_23505001 RAL-306_125b 1471 chr2R 23529534 23529557 chr2R 23537156 23537168 412 4 7621 8.5 5.0 6.8 0.5 7634 chr2R 23529534 intron bw - chr2R 23533351 intron bw - chr2R 23537168 exon bw - chr2R_4_23530001 chr2R_23530001 RAL-306_125b 1472 chr2R 23529563 23529605 chr2R 23537148 23537190 412 9 7608 3.0 5.0 4.0 1.8 7627 chr2R 23529563 intron bw - chr2R 23533376 intron bw - chr2R 23537190 exon bw - chr2R_9_23530001 chr2R_23530001 RAL-306_125b 1473 chr2R 23588045 23588075 chr2R 23588173 23588203 11 128 8.0 9.0 8.5 1.2 158 chr2R 23588045 intron apt + chr2R 23588124 intron apt + chr2R 23588203 intron apt + chr2R_11_23585001 chr2R_23585001 RAL-306_125b 1474 chr2R 23589134 23589187 chr2R 23589258 23589314 22 125 11.0 11.5 11.2 1.8 180 chr2R 23589134 intron apt + chr2R 23589224 intron apt + chr2R 23589314 intron apt + chr2R_22_23585001 chr2R_23585001 RAL-306_125b 1475 chr2R 23679427 23679476 chr2R 23679554 23679603 16 126 10.0 1.5 5.8 2.4 176 chr2R 23679427 3` UTR Pde8 + chr2R 23679515 3` UTR Pde8 + chr2R 23679603 3` UTR Pde8 + chr2R_16_23675001 chr2R_23675001 RAL-306_125b 1476 chr2R 23719778 23719812 chr2R 23719900 23719959 11 137 5.0 1.5 3.2 2.6 181 chr2R 23719778 intron,exon Sesn +,CG18128 - chr2R 23719868 intron,5` UTR Sesn +,CG18128 - chr2R 23719959 intron Sesn + chr2R_11_23715001 chr2R_23715001 RAL-306_125b 1477 chr2R 23744721 23744788 chr2R 23744850 23744917 23 127 9.0 8.0 8.5 2.4 196 chr2R 23744721 intron egl - chr2R 23744819 intron egl - chr2R 23744917 intron egl - chr2R_23_23740001 chr2R_23740001 RAL-306_125b 1478 chr2R 23771258 23771309 chr2R 23771357 23771410 9 122 0.0 0.0 0.0 9.0 152 chr2R 23771258 intron CG9850 - chr2R 23771334 intron CG9850 - chr2R 23771410 intron CG9850 - chr2R_9_23770001 chr2R_23770001 RAL-306_125b 1479 chr2R 23784428 23784498 chr2R 23784556 23784626 27 128 4.5 7.5 6.0 3.9 198 chr2R 23784428 intron CG9850 - chr2R 23784527 intron CG9850 - chr2R 23784626 intron CG9850 - chr2R_27_23780001 chr2R_23780001 RAL-306_125b 1480 chr2R 23799176 23799250 chr2R 23799309 23799384 22 126 10.0 7.0 8.5 2.3 208 chr2R 23799176 intergenic not near genes chr2R 23799280 intergenic not near genes chr2R 23799384 intergenic not near genes chr2R_22_23795001 chr2R_23795001 RAL-306_125b 1481 chr2R 23840148 23840216 chr2R 23844490 23844555 17 4349 34.5 35.5 35.0 0.5 4407 chr2R 23840148 intergenic snoRNA:Psi18S-176 -,CG5549 +,CR44805 + chr2R 23842352 exon shu - chr2R 23844555 exon Snap29 - chr2R_17_23840001 chr2R_23840001 RAL-306_125b 1482 chr2R 23914266 23914328 chr2R 23921935 23921947 412 19 7668 6.0 5.0 5.5 2.9 7681 chr2R 23914266 exon kcc + chr2R 23918106 intron kcc + chr2R 23921947 intron kcc + chr2R_19_23915001 chr2R_23915001 RAL-306_125b 1483 chr2R 24031338 24031407 chr2R 24031472 24031532 22 133 8.0 9.0 8.5 2.3 194 chr2R 24031338 5` UTR CG30172 - chr2R 24031435 intergenic CG30172 -,Chi - chr2R 24031532 intergenic Chi -,CG30172 - chr2R_22_24030001 chr2R_24030001 RAL-306_125b 1484 chr2R 24147027 24147092 chr2R 24154655 24154718 412 19 7625 4.0 5.5 4.8 3.3 7691 chr2R 24147027 intron Dat + chr2R 24150872 intron Dat + chr2R 24154718 intron Dat + chr2R_19_24150001 chr2R_24150001 RAL-306_125b 1485 chr2R 24177192 24177261 chr2R 24184727 24184796 412 33 7533 12.0 6.0 9.0 3.3 7604 chr2R 24177192 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184796 intron Nop60B + chr2R_33_24180001 chr2R_24180001 RAL-306_125b 1486 chr2R 24212285 24212356 chr2R 24212433 24212505 26 146 6.5 6.5 6.5 3.5 220 chr2R 24212285 intergenic CG30419 - chr2R 24212395 intergenic CG30419 - chr2R 24212505 3` UTR CG30419 - chr2R_26_24210001 chr2R_24210001 RAL-306_125b 1487 chr2R 24303493 24303499 chr2R 24303611 24303613 4 122 10.0 10.0 10.0 0.4 120 chr2R 24303493 intergenic not near genes chr2R 24303553 intergenic not near genes chr2R 24303613 intergenic not near genes chr2R_4_24300001 chr2R_24300001 RAL-306_125b 1488 chr2R 24331600 24331629 chr2R 24331741 24331770 7 139 7.5 7.5 7.5 0.8 170 chr2R 24331600 3` UTR slbo - chr2R 24331685 3` UTR slbo - chr2R 24331770 3` UTR slbo - chr2R_7_24330001 chr2R_24330001 RAL-306_125b 1489 chr2R 24353382 24353425 chr2R 24361789 24361822 roo 7 8408 15.0 5.5 10.2 0.6 8440 chr2R 24353382 intron,intron bs +,CR44811 - chr2R 24357602 intron,intron bs +,CR44811 - chr2R 24361822 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-306_125b 1490 chr2R 24430920 24430947 chr2R 24431058 24431061 8 134 0.0 20.5 10.2 0.7 141 chr2R 24430920 intergenic CG15873 -,Pgam5-2 - chr2R 24430990 intergenic CG15873 -,Pgam5-2 - chr2R 24431061 intergenic Pgam5-2 -,CG15873 - chr2R_8_24430001 chr2R_24430001 RAL-306_125b 1491 chr2R 24633956 24633974 chr2R 24634078 24634094 7 120 19.0 6.5 12.8 0.5 138 chr2R 24633956 intron CG13594 - chr2R 24634025 intron CG13594 - chr2R 24634094 intron CG13594 - chr2R_7_24630001 chr2R_24630001 RAL-306_125b 1492 chr2R 24633979 24634015 chr2R 24634075 24634146 15 120 8.0 5.5 6.8 1.9 167 chr2R 24633979 intron CG13594 - chr2R 24634062 intron CG13594 - chr2R 24634146 intron CG13594 - chr2R_15_24630001 chr2R_24630001 RAL-306_125b 1493 chr2R 24647533 24647610 chr2R 24655154 24655217 412 21 7614 1.0 6.5 3.8 4.4 7684 chr2R 24647533 intergenic not near genes chr2R 24651375 intergenic not near genes chr2R 24655217 intergenic not near genes chr2R_21_24650001 chr2R_24650001 RAL-306_125b 1494 chr2R 24687597 24687661 chr2R 24687726 24687795 21 132 4.5 8.0 6.2 2.9 198 chr2R 24687597 intergenic Mmp1 - chr2R 24687696 intergenic Mmp1 - chr2R 24687795 intergenic Mmp1 - chr2R_21_24685001 chr2R_24685001 RAL-306_125b 1495 chr2R 24718428 24718486 chr2R 24718545 24718618 16 128 6.5 8.5 7.5 1.9 190 chr2R 24718428 intron Mid1 - chr2R 24718523 intron Mid1 - chr2R 24718618 intron Mid1 - chr2R_16_24715001 chr2R_24715001 RAL-306_125b 1496 chr2R 24727868 24727918 chr2R 24735391 24735413 mdg1 16 7550 1.0 4.0 2.5 4.6 7545 chr2R 24727868 intron Mid1 - chr2R 24731640 intron Mid1 - chr2R 24735413 intron Mid1 - chr2R_16_24730001 chr2R_24730001 RAL-306_125b 1497 chr2R 24763569 24763631 chr2R 24765595 24765649 G2 8 2021 5.5 4.5 5.0 1.3 2080 chr2R 24763569 exon CG3894 + chr2R 24764609 intron CG3894 + chr2R 24765649 exon CG3894 + chr2R_8_24760001 chr2R_24760001 RAL-306_125b 1498 chr2R 24846425 24846442 chr2R 24846558 24846568 4 129 17.5 8.0 12.8 0.3 143 chr2R 24846425 intergenic not near genes chr2R 24846496 intergenic not near genes chr2R 24846568 intergenic not near genes chr2R_4_24845001 chr2R_24845001 RAL-306_125b 1499 chr2R 24859792 24859868 chr2R 24859928 24859999 10 134 3.0 0.5 1.8 3.6 207 chr2R 24859792 5` UTR CR44829 + chr2R 24859896 5` UTR CR44829 + chr2R 24859999 5` UTR CR44829 + chr2R_10_24855001 chr2R_24855001 RAL-306_125b 1500 chr2R 24884009 24884075 chr2R 24884141 24884207 34 132 10.0 5.0 7.5 4.0 198 chr2R 24884009 intron NKAIN + chr2R 24884108 intron NKAIN + chr2R 24884207 intron NKAIN + chr2R_34_24880001 chr2R_24880001 RAL-306_125b 1501 chr2R 24920341 24920402 chr2R 24920744 24920806 24 403 5.0 5.5 5.2 3.9 465 chr2R 24920341 3` UTR NaCP60E + chr2R 24920574 3` UTR NaCP60E + chr2R 24920806 3` UTR NaCP60E + chr2R_24_24920001 chr2R_24920001 RAL-306_125b 1502 chr2R 24928213 24928271 chr2R 24928411 24928469 9 195 15.5 9.5 12.5 0.7 256 chr2R 24928213 intron pain - chr2R 24928341 intergenic pain -,CG30427 - chr2R 24928469 intergenic pain -,CG30427 - chr2R_9_24925001 chr2R_24925001 RAL-306_125b 1503 chr2R 25004846 25004913 chr2R 25004974 25005041 31 126 12.0 10.0 11.0 2.6 195 chr2R 25004846 intron zip - chr2R 25004944 intron zip - chr2R 25005041 intron zip - chr2R_31_25000001 chr2R_25000001 RAL-306_125b 1504 chr2R 25014505 25014569 chr2R 25014619 25014689 11 113 3.5 4.0 3.8 2.3 184 chr2R 25014505 intron uzip + chr2R 25014597 intron uzip + chr2R 25014689 intron uzip + chr2R_11_25010001 chr2R_25010001 RAL-306_125b 1505 chr2R 25018295 25018364 chr2R 25018446 25018483 22 146 6.0 7.5 6.8 2.8 188 chr2R 25018295 intron uzip + chr2R 25018389 intron uzip + chr2R 25018483 intron uzip + chr2R_22_25015001 chr2R_25015001 RAL-306_125b 1506 chr2R 25022596 25022672 chr2R 25022730 25022806 25 133 4.0 3.0 3.5 5.6 210 chr2R 25022596 intron uzip + chr2R 25022701 intron uzip + chr2R 25022806 intron uzip + chr2R_25_25020001 chr2R_25020001 RAL-306_125b 1507 chr2R 25053095 25053119 chr2R 25053223 25053247 11 128 17.5 10.0 13.8 0.7 152 chr2R 25053095 intergenic not near genes chr2R 25053171 intergenic not near genes chr2R 25053247 intergenic not near genes chr2R_11_25050001 chr2R_25050001 RAL-306_125b 1508 chr2R 25061945 25062009 chr2R 25062073 25062137 24 126 5.5 10.0 7.8 2.7 192 chr2R 25061945 intergenic gsb + chr2R 25062041 5` UTR gsb + chr2R 25062137 5` UTR gsb + chr2R_24_25060001 chr2R_25060001 RAL-306_125b 1509 chr2R 25076522 25076530 chr2R 25076652 25076660 7 130 13.0 26.5 19.8 0.3 138 chr2R 25076522 intron gol - chr2R 25076591 intron gol - chr2R 25076660 intron gol - chr2R_7_25075001 chr2R_25075001 RAL-306_125b 1510 chr2R 25080257 25080339 chr2R 25080677 25080763 18 419 5.0 3.5 4.2 3.5 506 chr2R 25080257 intron gol - chr2R 25080510 intron gol - chr2R 25080763 intron gol - chr2R_18_25080001 chr2R_25080001 RAL-306_125b 1511 chr2R 25081562 25081638 chr2R 25082708 25082784 18 1141 3.0 4.0 3.5 4.0 1222 chr2R 25081562 intron gol - chr2R 25082173 intron gol - chr2R 25082784 intron gol - chr2R_18_25080001 chr2R_25080001 RAL-306_125b 1512 chr2R 25101227 25101291 chr2R 25101379 25101443 17 147 7.5 3.5 5.5 2.6 216 chr2R 25101227 intron lov - chr2R 25101335 intron lov - chr2R 25101443 intron lov - chr2R_17_25100001 chr2R_25100001 RAL-306_125b 1513 chr2R 25122925 25122943 chr2R 25123054 25123072 7 129 14.0 9.5 11.8 0.5 147 chr2R 25122925 intron lov - chr2R 25122998 intron lov - chr2R 25123072 intron lov - chr2R_7_25120001 chr2R_25120001 RAL-306_125b 1514 chr2R 25122944 25122992 chr2R 25123047 25123121 17 126 5.5 7.0 6.2 2.4 177 chr2R 25122944 intron lov - chr2R 25123032 intron lov - chr2R 25123121 intron lov - chr2R_17_25120001 chr2R_25120001 RAL-306_125b 1515 chr2R 25141612 25141676 chr2R 25159352 25159416 roo 24 17737 9.0 12.0 10.5 2.1 17804 chr2R 25141612 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159416 intergenic not near genes chr2R_24_25150001 chr2R_25150001 RAL-306_125b 1516 chr2R 25180716 25180793 chr2R 25180845 25180920 26 127 5.5 7.5 6.5 3.5 204 chr2R 25180716 intergenic not near genes chr2R 25180818 intergenic not near genes chr2R 25180920 intergenic not near genes chr2R_26_25180001 chr2R_25180001 RAL-306_125b 1517 chr2R 25181057 25181123 chr2R 25181204 25181270 14 147 9.0 10.0 9.5 1.3 213 chr2R 25181057 intergenic not near genes chr2R 25181164 intergenic not near genes chr2R 25181270 intergenic not near genes chr2R_14_25180001 chr2R_25180001 RAL-306_125b 1518 chr2R 25191682 25191718 chr2R 25191810 25191846 11 128 5.5 7.0 6.2 1.5 164 chr2R 25191682 intron CG9380 - chr2R 25191764 intron CG9380 - chr2R 25191846 intron CG9380 - chr2R_11_25190001 chr2R_25190001 RAL-306_125b 1519 chr2R 25193292 25193369 chr2R 25193484 25193563 21 191 7.0 7.0 7.0 2.6 271 chr2R 25193292 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193563 intron CG9380 - chr2R_21_25190001 chr2R_25190001 RAL-306_125b 1520 chr2R 25235982 25236037 chr2R 25236144 25236198 18 160 9.0 10.5 9.8 1.7 216 chr2R 25235982 intron CG9380 - chr2R 25236090 intron CG9380 - chr2R 25236198 intron CG9380 - chr2R_18_25235001 chr2R_25235001 RAL-306_125b 1521 chr2R 25253414 25253473 chr2R 25253540 25253574 14 124 9.0 12.5 10.8 1.2 160 chr2R 25253414 intron,intron CG9380 -,CG30428 + chr2R 25253494 intron,intron CG9380 -,CG30428 + chr2R 25253574 intron,intron CG9380 -,CG30428 + chr2R_14_25250001 chr2R_25250001 RAL-306_125b 1522 chr3L 68942 69014 chr3L 69078 69124 30 133 3.5 6.0 4.8 5.2 182 chr3L 68942 3` UTR Lsp1gamma + chr3L 69033 intergenic Lsp1gamma +,CR44510 + chr3L 69124 intergenic CR44510 +,Lsp1gamma + chr3L_30_65001 chr3L_65001 RAL-306_125b 1523 chr3L 93741 93799 chr3L 93872 93921 15 126 8.0 5.5 6.8 1.9 180 chr3L 93741 intergenic not near genes chr3L 93831 intergenic not near genes chr3L 93921 intergenic not near genes chr3L_15_90001 chr3L_90001 RAL-306_125b 1524 chr3L 105950 106025 chr3L 106129 106204 34 178 5.5 4.0 4.8 5.9 254 chr3L 105950 intergenic not near genes chr3L 106077 intergenic not near genes chr3L 106204 intergenic not near genes chr3L_34_105001 chr3L_105001 RAL-306_125b 1525 chr3L 108564 108625 chr3L 108757 108818 26 193 5.5 8.0 6.8 3.3 254 chr3L 108564 intergenic not near genes chr3L 108691 intergenic not near genes chr3L 108818 intergenic not near genes chr3L_26_105001 chr3L_105001 RAL-306_125b 1526 chr3L 110166 110237 chr3L 119383 119439 roo 24 9215 5.5 6.0 5.8 3.5 9273 chr3L 110166 intergenic not near genes chr3L 114802 intergenic not near genes chr3L 119439 intergenic not near genes chr3L_24_110001 chr3L_110001 RAL-306_125b 1527 chr3L 343151 343175 chr3L 343324 343348 9 172 9.5 15.0 12.2 0.7 197 chr3L 343151 intron Ptpmeg + chr3L 343250 intron Ptpmeg + chr3L 343348 intron Ptpmeg + chr3L_9_340001 chr3L_340001 RAL-306_125b 1528 chr3L 402656 402712 chr3L 409749 409815 297 13 7096 2.0 6.5 4.2 2.5 7159 chr3L 402656 intergenic not near genes chr3L 406236 intergenic not near genes chr3L 409815 intergenic not near genes chr3L_13_405001 chr3L_405001 RAL-306_125b 1529 chr3L 421010 421073 chr3L 421156 421219 20 145 9.0 8.5 8.8 2.0 209 chr3L 421010 intergenic not near genes chr3L 421114 intergenic not near genes chr3L 421219 intergenic not near genes chr3L_20_420001 chr3L_420001 RAL-306_125b 1530 chr3L 497525 497539 chr3L 497753 497767 7 227 12.0 6.5 9.2 0.7 242 chr3L 497525 intron klar - chr3L 497646 intron klar - chr3L 497767 intron klar - chr3L_7_495001 chr3L_495001 RAL-306_125b 1531 chr3L 507007 507082 chr3L 507143 507196 23 132 2.0 0.0 1.0 11.5 189 chr3L 507007 intron klar - chr3L 507102 intron klar - chr3L 507196 intron klar - chr3L_23_505001 chr3L_505001 RAL-306_125b 1532 chr3L 508447 508520 chr3L 508583 508656 31 134 8.0 5.5 6.8 4.0 209 chr3L 508447 exon klar - chr3L 508552 5` UTR klar - chr3L 508656 5` UTR klar - chr3L_31_505001 chr3L_505001 RAL-306_125b 1533 chr3L 561437 561465 chr3L 561564 561592 11 127 13.5 3.0 8.2 1.2 155 chr3L 561437 intron hipk + chr3L 561514 intron hipk + chr3L 561592 intron hipk + chr3L_11_560001 chr3L_560001 RAL-306_125b 1534 chr3L 564433 564503 chr3L 564575 564638 29 134 7.0 6.0 6.5 3.9 205 chr3L 564433 intron hipk + chr3L 564536 intron hipk + chr3L 564638 intron hipk + chr3L_29_560001 chr3L_560001 RAL-306_125b 1535 chr3L 566751 566822 chr3L 567154 567205 27 402 4.5 9.0 6.8 3.5 454 chr3L 566751 intron hipk + chr3L 566978 intron hipk + chr3L 567205 intron hipk + chr3L_27_565001 chr3L_565001 RAL-306_125b 1536 chr3L 606869 606922 chr3L 606998 607051 15 126 8.5 11.0 9.8 1.4 182 chr3L 606869 intergenic Reg-2 - chr3L 606960 intergenic Reg-2 - chr3L 607051 intergenic Reg-2 - chr3L_15_605001 chr3L_605001 RAL-306_125b 1537 chr3L 642431 642493 chr3L 642572 642634 26 141 8.5 8.5 8.5 2.7 203 chr3L 642431 5` UTR CR43334 + chr3L 642532 5` UTR CR43334 + chr3L 642634 5` UTR CR43334 + chr3L_26_640001 chr3L_640001 RAL-306_125b 1538 chr3L 643824 643826 chr3L 21448026 21448027 14 20804202 33.5 31.5 32.5 0.4 20804203 chr3L 643824 5` UTR CR43334 + chr3L 11045926 intron CG43693 - chr3L 21448027 3` UTR Syx7 + chr3L_14_11045001 chr3L_11045001 RAL-306_125b 1539 chr3L 646746 646769 chr3L 646874 646897 9 128 15.5 1.0 8.2 1.0 151 chr3L 646746 intergenic not near genes chr3L 646822 intergenic not near genes chr3L 646897 intergenic not near genes chr3L_9_645001 chr3L_645001 RAL-306_125b 1540 chr3L 646770 646795 chr3L 646873 646923 17 124 11.0 1.5 6.2 2.4 153 chr3L 646770 intergenic not near genes chr3L 646846 intergenic not near genes chr3L 646923 intergenic not near genes chr3L_17_645001 chr3L_645001 RAL-306_125b 1541 chr3L 789867 789947 chr3L 790402 790483 roo 14 535 0.0 0.0 0.0 14.0 616 chr3L 789867 intergenic not near genes chr3L 790175 intergenic not near genes chr3L 790483 intergenic not near genes chr3L_14_790001 chr3L_790001 RAL-306_125b 1542 chr3L 802566 802566 chr3L 11777678 11777678 4 10975112 12.0 29.5 20.8 0.2 10975112 chr3L 802566 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_6290001 chr3L_6290001 RAL-306_125b 1543 chr3L 809310 809371 chr3L 809452 809513 13 147 6.0 6.5 6.2 1.8 203 chr3L 809310 intergenic not near genes chr3L 809412 intergenic not near genes chr3L 809513 intergenic not near genes chr3L_13_805001 chr3L_805001 RAL-306_125b 1544 chr3L 857965 858031 chr3L 866482 866556 Tirant 8 8527 4.0 1.0 2.5 2.3 8591 chr3L 857965 intergenic not near genes chr3L 862260 intergenic not near genes chr3L 866556 5` UTR CG12502 + chr3L_8_860001 chr3L_860001 RAL-306_125b 1545 chr3L 925134 925210 chr3L 932605 932620 mdg1 24 7472 5.0 7.0 6.0 3.4 7486 chr3L 925134 intron Glut1 + chr3L 928877 intron Glut1 + chr3L 932620 intron Glut1 + chr3L_24_925001 chr3L_925001 RAL-306_125b 1546 chr3L 933842 933854 chr3L 934011 934037 10 181 10.0 5.5 7.8 1.1 195 chr3L 933842 intron Glut1 + chr3L 933940 intron Glut1 + chr3L 934037 intron Glut1 + chr3L_10_930001 chr3L_930001 RAL-306_125b 1547 chr3L 933855 933889 chr3L 934005 934072 8 179 3.0 5.0 4.0 1.6 217 chr3L 933855 intron Glut1 + chr3L 933964 intron Glut1 + chr3L 934072 intron Glut1 + chr3L_8_930001 chr3L_930001 RAL-306_125b 1548 chr3L 939246 939298 chr3L 939387 939441 5 141 6.0 5.0 5.5 0.8 195 chr3L 939246 intron Glut1 + chr3L 939344 intron Glut1 + chr3L 939441 intron Glut1 + chr3L_5_935001 chr3L_935001 RAL-306_125b 1549 chr3L 939737 939752 chr3L 940908 940923 jockey 9 1171 9.0 6.5 7.8 1.0 1186 chr3L 939737 intron Glut1 + chr3L 940330 intron Glut1 + chr3L 940923 intron Glut1 + chr3L_9_940001 chr3L_940001 RAL-306_125b 1550 chr3L 939756 939797 chr3L 940901 940968 jockey 11 1166 7.5 6.5 7.0 1.4 1212 chr3L 939756 intron Glut1 + chr3L 940362 intron Glut1 + chr3L 940968 intron Glut1 + chr3L_11_940001 chr3L_940001 RAL-306_125b 1551 chr3L 960967 961043 chr3L 961110 961186 24 143 6.5 6.5 6.5 3.2 219 chr3L 960967 intron Glut1 + chr3L 961076 intron Glut1 + chr3L 961186 intron Glut1 + chr3L_24_960001 chr3L_960001 RAL-306_125b 1552 chr3L 986588 986658 chr3L 986714 986784 22 126 5.5 3.5 4.5 4.0 196 chr3L 986588 intergenic not near genes chr3L 986686 intergenic not near genes chr3L 986784 intergenic not near genes chr3L_22_985001 chr3L_985001 RAL-306_125b 1553 chr3L 1031535 1031552 chr3L 1031660 1031678 5 124 10.5 8.0 9.2 0.5 143 chr3L 1031535 intron trio - chr3L 1031606 intron trio - chr3L 1031678 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-306_125b 1554 chr3L 1031565 1031593 chr3L 1031657 1031719 8 104 5.0 6.5 5.8 1.2 154 chr3L 1031565 intron trio - chr3L 1031642 intron trio - chr3L 1031719 intron trio - chr3L_8_1030001 chr3L_1030001 RAL-306_125b 1555 chr3L 1033316 1033327 chr3L 1033462 1033473 5 146 0.0 0.0 0.0 5.0 157 chr3L 1033316 intron trio - chr3L 1033394 intron trio - chr3L 1033473 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-306_125b 1556 chr3L 1040500 1040581 chr3L 1040634 1040724 17 133 4.0 0.5 2.2 5.3 224 chr3L 1040500 intron bab1 - chr3L 1040612 intron bab1 - chr3L 1040724 intron bab1 - chr3L_17_1040001 chr3L_1040001 RAL-306_125b 1557 chr3L 1047306 1047310 chr3L 1055168 1055172 412 5 7862 15.5 5.5 10.5 0.4 7866 chr3L 1047306 intron bab1 - chr3L 1051239 intron bab1 - chr3L 1055172 intron bab1 - chr3L_5_1050001 chr3L_1050001 RAL-306_125b 1558 chr3L 1047312 1047377 chr3L 1055167 1055223 412 20 7848 8.0 5.5 6.8 2.6 7911 chr3L 1047312 intron bab1 - chr3L 1051268 intron bab1 - chr3L 1055223 intron bab1 - chr3L_20_1050001 chr3L_1050001 RAL-306_125b 1559 chr3L 1094980 1095047 chr3L 1095111 1095143 24 125 11.0 8.0 9.5 2.3 163 chr3L 1094980 intron bab1 - chr3L 1095062 intron bab1 - chr3L 1095143 intron bab1 - chr3L_24_1095001 chr3L_1095001 RAL-306_125b 1560 chr3L 1109582 1109651 chr3L 1109720 1109764 25 136 5.0 4.0 4.5 4.5 182 chr3L 1109582 intergenic not near genes chr3L 1109673 intergenic not near genes chr3L 1109764 intergenic not near genes chr3L_25_1105001 chr3L_1105001 RAL-306_125b 1561 chr3L 1143881 1143955 chr3L 1144029 1144102 9 143 0.0 8.0 4.0 1.8 221 chr3L 1143881 exon bab2 - chr3L 1143992 intron bab2 - chr3L 1144102 intron bab2 - chr3L_9_1140001 chr3L_1140001 RAL-306_125b 1562 chr3L 1154077 1154157 chr3L 1163280 1163357 roo 21 9193 6.0 8.5 7.2 2.6 9280 chr3L 1154077 intron bab2 - chr3L 1158717 intron bab2 - chr3L 1163357 intron bab2 - chr3L_21_1155001 chr3L_1155001 RAL-306_125b 1563 chr3L 1166972 1167015 chr3L 1167099 1167142 16 127 5.5 8.0 6.8 2.1 170 chr3L 1166972 intron bab2 - chr3L 1167057 intron bab2 - chr3L 1167142 intron bab2 - chr3L_16_1165001 chr3L_1165001 RAL-306_125b 1564 chr3L 1175857 1175927 chr3L 1175990 1176060 23 129 4.5 4.5 4.5 4.2 203 chr3L 1175857 intron bab2 - chr3L 1175958 intron bab2 - chr3L 1176060 intron bab2 - chr3L_23_1175001 chr3L_1175001 RAL-306_125b 1565 chr3L 1219553 1219623 chr3L 1227330 1227330 412 17 7773 5.5 8.0 6.8 2.2 7777 chr3L 1219553 intron mwh + chr3L 1223442 intron mwh + chr3L 1227330 intron mwh + chr3L_17_1220001 chr3L_1220001 RAL-306_125b 1566 chr3L 1270695 1270762 chr3L 1270836 1270875 14 139 8.5 4.0 6.2 1.9 180 chr3L 1270695 intron CG9134 + chr3L 1270785 intron CG9134 + chr3L 1270875 intron CG9134 + chr3L_14_1270001 chr3L_1270001 RAL-306_125b 1567 chr3L 1283983 1284044 chr3L 1284133 1284194 13 148 10.0 5.5 7.8 1.5 211 chr3L 1283983 intron CG32333 + chr3L 1284088 intron CG32333 + chr3L 1284194 intron CG32333 + chr3L_13_1280001 chr3L_1280001 RAL-306_125b 1568 chr3L 1289990 1290002 chr3L 1290146 1290158 6 156 0.0 7.0 3.5 1.3 168 chr3L 1289990 intron CG32333 + chr3L 1290074 intron CG32333 + chr3L 1290158 intron CG32333 + chr3L_6_1290001 chr3L_1290001 RAL-306_125b 1569 chr3L 1290003 1290049 chr3L 1290143 1290168 14 150 0.0 6.5 3.2 3.3 165 chr3L 1290003 exon CG32333 + chr3L 1290086 intron CG32333 + chr3L 1290168 intron CG32333 + chr3L_14_1290001 chr3L_1290001 RAL-306_125b 1570 chr3L 1372315 1372383 chr3L 1372443 1372511 17 128 8.0 7.5 7.8 1.9 196 chr3L 1372315 intron,intron Ptp61F -,ru + chr3L 1372413 intron,intron Ptp61F -,ru + chr3L 1372511 intron,intron Ptp61F -,ru + chr3L_17_1370001 chr3L_1370001 RAL-306_125b 1571 chr3L 1396698 1396716 chr3L 1396831 1396850 12 133 20.0 11.0 15.5 0.7 152 chr3L 1396698 intron Ptp61F - chr3L 1396774 intron Ptp61F - chr3L 1396850 intron Ptp61F - chr3L_12_1395001 chr3L_1395001 RAL-306_125b 1572 chr3L 1396717 1396757 chr3L 1396826 1396891 14 127 14.5 10.0 12.2 1.1 174 chr3L 1396717 intron Ptp61F - chr3L 1396804 intron Ptp61F - chr3L 1396891 intron Ptp61F - chr3L_14_1395001 chr3L_1395001 RAL-306_125b 1573 chr3L 1424757 1424770 chr3L 1430032 1430063 Rt1a 7 5286 1.5 7.0 4.2 1.3 5306 chr3L 1424757 intron Ptp61F - chr3L 1427410 intron Ptp61F - chr3L 1430063 intron Ptp61F - chr3L_7_1425001 chr3L_1425001 RAL-306_125b 1574 chr3L 1468449 1468465 chr3L 1468589 1468605 7 140 14.0 3.0 8.5 0.7 156 chr3L 1468449 intron,3` UTR Ptp61F -,rho + chr3L 1468527 intron,3` UTR Ptp61F -,rho + chr3L 1468605 intron,3` UTR Ptp61F -,rho + chr3L_7_1465001 chr3L_1465001 RAL-306_125b 1575 chr3L 1477347 1477365 chr3L 1477487 1477505 8 140 3.5 0.5 2.0 2.7 158 chr3L 1477347 intron stet - chr3L 1477426 intron stet - chr3L 1477505 intron stet - chr3L_8_1475001 chr3L_1475001 RAL-306_125b 1576 chr3L 1485688 1485740 chr3L 1486909 1486957 1360 8 1213 6.0 11.5 8.8 0.8 1269 chr3L 1485688 intron stet - chr3L 1486322 intron stet - chr3L 1486957 intron stet - chr3L_8_1485001 chr3L_1485001 RAL-306_125b 1577 chr3L 1505956 1506027 chr3L 1513603 1513674 17.6 24 7646 7.0 7.0 7.0 3.0 7718 chr3L 1505956 intron,intron Psa +,cue - chr3L 1509815 intron,intron Psa +,cue - chr3L 1513674 intron,intron Psa +,cue - chr3L_24_1505001 chr3L_1505001 RAL-306_125b 1578 chr3L 1531371 1531404 chr3L 1535814 1535847 4 4449 29.0 27.5 28.2 0.1 4476 chr3L 1531371 intron CG12090 - chr3L 1533609 exon CG12090 - chr3L 1535847 exon CG12091 - chr3L_4_1530001 chr3L_1530001 RAL-306_125b 1579 chr3L 1531370 1531429 chr3L 1535854 1535887 5 4461 37.5 27.0 32.2 0.2 4517 chr3L 1531370 intron CG12090 - chr3L 1533628 exon CG12090 - chr3L 1535887 exon CG12091 - chr3L_5_1530001 chr3L_1530001 RAL-306_125b 1580 chr3L 1571419 1571493 chr3L 1571554 1571629 19 135 4.0 7.0 5.5 2.9 210 chr3L 1571419 intron CG12004 + chr3L 1571524 intron CG12004 + chr3L 1571629 intron CG12004 + chr3L_19_1570001 chr3L_1570001 RAL-306_125b 1581 chr3L 1585900 1585935 chr3L 1586033 1586068 13 133 1.0 1.0 1.0 6.5 168 chr3L 1585900 intron CG13917 + chr3L 1585984 intron CG13917 + chr3L 1586068 intron CG13917 + chr3L_13_1585001 chr3L_1585001 RAL-306_125b 1582 chr3L 1683974 1684037 chr3L 1684102 1684159 9 118 2.0 6.0 4.0 1.8 185 chr3L 1683974 intron CG7991 + chr3L 1684066 intron CG7991 + chr3L 1684159 intron CG7991 + chr3L_9_1680001 chr3L_1680001 RAL-306_125b 1583 chr3L 1688199 1688259 chr3L 1688377 1688438 11 179 7.0 3.5 5.2 1.8 239 chr3L 1688199 intron CG7991 + chr3L 1688318 intron CG7991 + chr3L 1688438 intron CG7991 + chr3L_11_1685001 chr3L_1685001 RAL-306_125b 1584 chr3L 1728466 1728541 chr3L 1728601 1728650 30 133 10.5 7.5 9.0 3.0 184 chr3L 1728466 intron drpr - chr3L 1728558 intron drpr - chr3L 1728650 intron drpr - chr3L_30_1725001 chr3L_1725001 RAL-306_125b 1585 chr3L 1740827 1740886 chr3L 1741109 1741138 pogo 31 286 6.5 13.5 10.0 2.8 311 chr3L 1740827 intron Gk + chr3L 1740982 intron Gk + chr3L 1741138 intron Gk + chr3L_31_1740001 chr3L_1740001 RAL-306_125b 1586 chr3L 1821587 1821646 chr3L 1821719 1821773 23 132 9.5 2.5 6.0 3.3 186 chr3L 1821587 intron GV1 + chr3L 1821680 intron GV1 + chr3L 1821773 intron GV1 + chr3L_23_1820001 chr3L_1820001 RAL-306_125b 1587 chr3L 1824906 1824928 chr3L 1825045 1825067 8 139 11.0 6.0 8.5 0.8 161 chr3L 1824906 intron Cpr62Ba - chr3L 1824986 intron Cpr62Ba - chr3L 1825067 exon Cpr62Ba - chr3L_8_1820001 chr3L_1820001 RAL-306_125b 1588 chr3L 1841525 1841560 chr3L 1841660 1841694 11 135 6.0 5.5 5.8 1.6 169 chr3L 1841525 intron Cpr62Bc - chr3L 1841610 intron Cpr62Bc - chr3L 1841694 intron Cpr62Bc - chr3L_11_1840001 chr3L_1840001 RAL-306_125b 1589 chr3L 1924931 1924976 chr3L 1925119 1925164 5 187 2.5 5.5 4.0 1.0 233 chr3L 1924931 exon Dbx + chr3L 1925048 intron Dbx + chr3L 1925164 intron Dbx + chr3L_5_1925001 chr3L_1925001 RAL-306_125b 1590 chr3L 2035056 2035306 chr3L 2035296 2035433 9 164 0.0 0.0 0.0 9.0 377 chr3L 2035056 intergenic not near genes chr3L 2035244 intergenic not near genes chr3L 2035433 intergenic not near genes chr3L_9_2035001 chr3L_2035001 RAL-306_125b 1591 chr3L 2108201 2108248 chr3L 2113455 2113502 copia 10 5253 0.0 5.5 2.8 2.6 5301 chr3L 2108201 intron sls - chr3L 2110852 intron sls - chr3L 2113502 intron sls - chr3L_10_2110001 chr3L_2110001 RAL-306_125b 1592 chr3L 2199783 2199819 chr3L 2199904 2199945 17 126 2.5 11.0 6.8 2.2 162 chr3L 2199783 intergenic not near genes chr3L 2199864 intergenic not near genes chr3L 2199945 intergenic not near genes chr3L_17_2195001 chr3L_2195001 RAL-306_125b 1593 chr3L 2307959 2307967 chr3L 2308115 2308123 11 156 24.0 8.5 16.2 0.6 164 chr3L 2307959 intergenic not near genes chr3L 2308041 intergenic not near genes chr3L 2308123 intergenic not near genes chr3L_11_2305001 chr3L_2305001 RAL-306_125b 1594 chr3L 2307968 2308029 chr3L 2308113 2308185 17 152 10.0 8.5 9.2 1.7 217 chr3L 2307968 intergenic not near genes chr3L 2308076 intergenic not near genes chr3L 2308185 intergenic not near genes chr3L_17_2305001 chr3L_2305001 RAL-306_125b 1595 chr3L 2321122 2321189 chr3L 2321248 2321316 11 122 10.0 9.0 9.5 1.0 194 chr3L 2321122 intergenic not near genes chr3L 2321219 intergenic not near genes chr3L 2321316 intergenic not near genes chr3L_11_2320001 chr3L_2320001 RAL-306_125b 1596 chr3L 2332932 2333001 chr3L 2333252 2333321 23 315 11.5 9.5 10.5 2.0 389 chr3L 2332932 intron MsR1 + chr3L 2333126 intron MsR1 + chr3L 2333321 intron MsR1 + chr3L_23_2330001 chr3L_2330001 RAL-306_125b 1597 chr3L 2411319 2411344 chr3L 2411428 2411459 7 118 1.5 7.0 4.2 1.3 140 chr3L 2411319 intron CG45186 + chr3L 2411389 intron CG45186 + chr3L 2411459 intron CG45186 + chr3L_7_2410001 chr3L_2410001 RAL-306_125b 1598 chr3L 2447460 2447532 chr3L 2456666 2456730 roo 25 9200 5.0 9.5 7.2 3.0 9270 chr3L 2447460 intron CG45186 + chr3L 2452095 intron CG45186 + chr3L 2456730 intron CG45186 + chr3L_25_2450001 chr3L_2450001 RAL-306_125b 1599 chr3L 2467405 2467481 chr3L 2467552 2467628 13 147 4.0 7.0 5.5 2.0 223 chr3L 2467405 intron CG45186 + chr3L 2467516 intron CG45186 + chr3L 2467628 intron CG45186 + chr3L_13_2465001 chr3L_2465001 RAL-306_125b 1600 chr3L 2515378 2515428 chr3L 2515512 2515560 7 132 2.0 9.5 5.8 1.0 182 chr3L 2515378 intron Spn - chr3L 2515469 intron Spn - chr3L 2515560 intron Spn - chr3L_7_2515001 chr3L_2515001 RAL-306_125b 1601 chr3L 2534571 2534616 chr3L 2534700 2534744 6 131 0.0 3.5 1.8 2.1 173 chr3L 2534571 intron Spn - chr3L 2534658 intron Spn - chr3L 2534744 exon Spn - chr3L_6_2530001 chr3L_2530001 RAL-306_125b 1602 chr3L 2575962 2575987 chr3L 2576095 2576120 10 131 8.5 8.5 8.5 1.1 158 chr3L 2575962 intron msn - chr3L 2576041 intron msn - chr3L 2576120 intron msn - chr3L_10_2575001 chr3L_2575001 RAL-306_125b 1603 chr3L 2579300 2579343 chr3L 2579441 2579473 18 138 1.0 9.0 5.0 3.0 173 chr3L 2579300 intron msn - chr3L 2579386 intron msn - chr3L 2579473 exon msn - chr3L_18_2575001 chr3L_2575001 RAL-306_125b 1604 chr3L 2579345 2579353 chr3L 2579431 2579494 5 129 1.0 7.0 4.0 1.0 149 chr3L 2579345 intron msn - chr3L 2579420 intron msn - chr3L 2579494 exon msn - chr3L_5_2575001 chr3L_2575001 RAL-306_125b 1605 chr3L 2581849 2581910 chr3L 2581993 2582054 12 141 6.5 6.5 6.5 1.6 205 chr3L 2581849 intron msn - chr3L 2581952 intron msn - chr3L 2582054 intron msn - chr3L_12_2580001 chr3L_2580001 RAL-306_125b 1606 chr3L 2617221 2617255 chr3L 2617357 2617391 11 136 5.0 5.0 5.0 1.8 170 chr3L 2617221 intron Pxn - chr3L 2617306 intron Pxn - chr3L 2617391 intron Pxn - chr3L_11_2615001 chr3L_2615001 RAL-306_125b 1607 chr3L 2626374 2626439 chr3L 2626538 2626613 20 171 8.5 9.5 9.0 2.0 239 chr3L 2626374 intron Pxn - chr3L 2626494 intron Pxn - chr3L 2626613 intron Pxn - chr3L_20_2625001 chr3L_2625001 RAL-306_125b 1608 chr3L 2680467 2680539 chr3L 2680597 2680606 12 123 5.0 0.0 2.5 3.4 139 chr3L 2680467 intron Fife - chr3L 2680536 intron Fife - chr3L 2680606 intron Fife - chr3L_12_2680001 chr3L_2680001 RAL-306_125b 1609 chr3L 2683904 2683971 chr3L 2684030 2684097 27 125 10.0 10.0 10.0 2.5 193 chr3L 2683904 intron Fife - chr3L 2684000 intron Fife - chr3L 2684097 intron Fife - chr3L_27_2680001 chr3L_2680001 RAL-306_125b 1610 chr3L 2719493 2719559 chr3L 2719644 2719711 20 150 12.0 9.0 10.5 1.7 218 chr3L 2719493 3` UTR Mrtf - chr3L 2719602 3` UTR Mrtf - chr3L 2719711 3` UTR Mrtf - chr3L_20_2715001 chr3L_2715001 RAL-306_125b 1611 chr3L 2751430 2751462 chr3L 2755775 2755807 F-element 12 4343 9.0 13.5 11.2 1.0 4377 chr3L 2751430 intron Mrtf - chr3L 2753618 intron Mrtf - chr3L 2755807 intron Mrtf - chr3L_12_2750001 chr3L_2750001 RAL-306_125b 1612 chr3L 2835838 2835866 chr3L 2835968 2835991 6 129 9.5 9.5 9.5 0.6 153 chr3L 2835838 intron CG43444 - chr3L 2835914 intron CG43444 - chr3L 2835991 intron CG43444 - chr3L_6_2835001 chr3L_2835001 RAL-306_125b 1613 chr3L 2854427 2854503 chr3L 2854555 2854584 17 121 3.5 3.0 3.2 4.0 157 chr3L 2854427 intron CG43444 - chr3L 2854506 intron CG43444 - chr3L 2854584 intron CG43444 - chr3L_17_2850001 chr3L_2850001 RAL-306_125b 1614 chr3L 2896487 2896539 chr3L 2896614 2896652 17 123 12.0 8.5 10.2 1.5 165 chr3L 2896487 intron Shab + chr3L 2896570 intron Shab + chr3L 2896652 intron Shab + chr3L_17_2895001 chr3L_2895001 RAL-306_125b 1615 chr3L 2927795 2927841 chr3L 2936122 2936164 Tirant 25 8325 10.0 10.5 10.2 2.2 8369 chr3L 2927795 intron Shab + chr3L 2931980 intron Shab + chr3L 2936164 intron Shab + chr3L_25_2930001 chr3L_2930001 RAL-306_125b 1616 chr3L 2927842 2927853 chr3L 2936116 2936180 Tirant 8 8320 7.0 9.5 8.2 0.9 8338 chr3L 2927842 intron Shab + chr3L 2932011 intron Shab + chr3L 2936180 intron Shab + chr3L_8_2930001 chr3L_2930001 RAL-306_125b 1617 chr3L 2966139 2966216 chr3L 2966284 2966361 14 143 11.5 11.0 11.2 1.1 222 chr3L 2966139 intergenic not near genes chr3L 2966250 intergenic not near genes chr3L 2966361 intergenic not near genes chr3L_14_2965001 chr3L_2965001 RAL-306_125b 1618 chr3L 2966689 2966726 chr3L 2974163 2974203 mdg1 12 7475 12.0 4.0 8.0 1.3 7514 chr3L 2966689 intergenic not near genes chr3L 2970446 intergenic not near genes chr3L 2974203 intergenic not near genes chr3L_12_2970001 chr3L_2970001 RAL-306_125b 1619 chr3L 2983248 2983265 chr3L 2983380 2983386 5 130 18.0 4.5 11.2 0.4 138 chr3L 2983248 exon CG2107 + chr3L 2983317 3` UTR CG2107 + chr3L 2983386 3` UTR CG2107 + chr3L_5_2980001 chr3L_2980001 RAL-306_125b 1620 chr3L 3028974 3029024 chr3L 3029122 3029177 16 152 5.5 6.5 6.0 2.3 203 chr3L 3028974 intergenic not near genes chr3L 3029076 intergenic not near genes chr3L 3029177 intergenic not near genes chr3L_16_3025001 chr3L_3025001 RAL-306_125b 1621 chr3L 3030960 3030967 chr3L 3031090 3031097 4 130 2.5 7.5 5.0 0.7 137 chr3L 3030960 intergenic not near genes chr3L 3031028 intergenic not near genes chr3L 3031097 intergenic not near genes chr3L_4_3030001 chr3L_3030001 RAL-306_125b 1622 chr3L 3040278 3040299 chr3L 3042117 3042138 S-element 8 1839 22.5 0.0 11.2 0.7 1860 chr3L 3040278 3` UTR CG2162 + chr3L 3041208 intergenic not near genes chr3L 3042138 intergenic Jafrac2 + chr3L_8_3040001 chr3L_3040001 RAL-306_125b 1623 chr3L 3050846 3050873 chr3L 3050983 3051010 8 137 12.0 2.0 7.0 1.0 164 chr3L 3050846 intron CG32485 + chr3L 3050928 intron CG32485 + chr3L 3051010 exon CG32485 + chr3L_8_3050001 chr3L_3050001 RAL-306_125b 1624 chr3L 3051696 3051757 chr3L 3051988 3052049 pogo 27 290 13.0 7.5 10.2 2.4 353 chr3L 3051696 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052049 intergenic CG32485 +,CG1271 + chr3L_27_3050001 chr3L_3050001 RAL-306_125b 1625 chr3L 3061241 3061286 chr3L 3069874 3069919 Tirant 6 8631 8.0 7.5 7.8 0.7 8678 chr3L 3061241 intron CG32486 - chr3L 3065580 intron CG32486 - chr3L 3069919 intron CG32486 - chr3L_6_3065001 chr3L_3065001 RAL-306_125b 1626 chr3L 3061289 3061315 chr3L 3069866 3069919 Tirant 5 8596 6.0 6.5 6.2 0.7 8630 chr3L 3061289 intron CG32486 - chr3L 3065604 intron CG32486 - chr3L 3069919 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-306_125b 1627 chr3L 3102771 3102847 chr3L 3102907 3102954 29 132 6.0 7.5 6.8 3.7 183 chr3L 3102771 intron Cht7 - chr3L 3102862 intron Cht7 - chr3L 3102954 intron Cht7 - chr3L_29_3100001 chr3L_3100001 RAL-306_125b 1628 chr3L 3107229 3107261 chr3L 3107365 3107397 10 135 7.5 3.5 5.5 1.5 168 chr3L 3107229 intergenic Cht7 - chr3L 3107313 intergenic Cht7 - chr3L 3107397 intergenic Cht7 - chr3L_10_3105001 chr3L_3105001 RAL-306_125b 1629 chr3L 3128144 3128200 chr3L 3128280 3128335 24 135 7.0 5.5 6.2 3.3 191 chr3L 3128144 intergenic prominin-like - chr3L 3128240 intergenic not near genes chr3L 3128335 intergenic CG11537 - chr3L_24_3125001 chr3L_3125001 RAL-306_125b 1630 chr3L 3128201 3128215 chr3L 3128277 3128351 10 128 4.0 4.5 4.2 1.9 150 chr3L 3128201 intergenic prominin-like - chr3L 3128276 intergenic not near genes chr3L 3128351 intergenic CG11537 - chr3L_10_3125001 chr3L_3125001 RAL-306_125b 1631 chr3L 3259766 3259833 chr3L 3259916 3259983 8 150 7.0 8.0 7.5 0.9 217 chr3L 3259766 intron ckd + chr3L 3259874 intron ckd + chr3L 3259983 intron ckd + chr3L_8_3255001 chr3L_3255001 RAL-306_125b 1632 chr3L 3281392 3281462 chr3L 3281938 3281983 Doc 21 540 8.0 9.0 8.5 2.2 591 chr3L 3281392 intron CG12017 + chr3L 3281688 intron CG12017 + chr3L 3281983 intron CG12017 + chr3L_21_3280001 chr3L_3280001 RAL-306_125b 1633 chr3L 3314098 3314168 chr3L 3314282 3314350 46 180 11.0 14.0 12.5 3.4 252 chr3L 3314098 intergenic ZnT63C +,Drsl2 + chr3L 3314224 intergenic Drsl2 +,ZnT63C + chr3L 3314350 5` UTR Drsl2 + chr3L_46_3310001 chr3L_3310001 RAL-306_125b 1634 chr3L 3312274 3312343 chr3L 3315505 3315574 17 3234 27.5 52.0 39.8 0.4 3300 chr3L 3312274 exon ZnT63C + chr3L 3313924 3` UTR ZnT63C + chr3L 3315574 intergenic Drsl4 +,Drsl3 + chr3L_17_3310001 chr3L_3310001 RAL-306_125b 1635 chr3L 3315934 3316005 chr3L 3316085 3316151 22 150 3.0 7.5 5.2 3.5 217 chr3L 3315934 3` UTR Drsl4 + chr3L 3316042 intergenic Drsl4 + chr3L 3316151 intergenic Drsl4 + chr3L_22_3315001 chr3L_3315001 RAL-306_125b 1636 chr3L 3392946 3393017 chr3L 3393079 3393130 11 126 5.0 0.5 2.8 2.9 184 chr3L 3392946 intergenic not near genes chr3L 3393038 intergenic not near genes chr3L 3393130 intergenic not near genes chr3L_11_3390001 chr3L_3390001 RAL-306_125b 1637 chr3L 3422564 3422596 chr3L 3422703 3422720 5 136 13.0 6.5 9.8 0.5 156 chr3L 3422564 intron sty - chr3L 3422642 intron sty - chr3L 3422720 intron sty - chr3L_5_3420001 chr3L_3420001 RAL-306_125b 1638 chr3L 3475042 3475064 chr3L 3475526 3475558 jockey 6 492 19.5 5.0 12.2 0.5 516 chr3L 3475042 intron CG42324 + chr3L 3475300 intron CG42324 + chr3L 3475558 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-306_125b 1639 chr3L 3475065 3475078 chr3L 3475524 3475542 jockey 7 483 13.0 4.0 8.5 0.7 477 chr3L 3475065 intron CG42324 + chr3L 3475304 intron CG42324 + chr3L 3475542 intron CG42324 + chr3L_7_3475001 chr3L_3475001 RAL-306_125b 1640 chr3L 3494147 3494202 chr3L 3494274 3494329 15 126 0.0 10.0 5.0 2.5 182 chr3L 3494147 intron CG42324 + chr3L 3494238 intron CG42324 + chr3L 3494329 intron CG42324 + chr3L_15_3490001 chr3L_3490001 RAL-306_125b 1641 chr3L 3593852 3593866 chr3L 3593987 3594001 5 135 8.5 1.5 5.0 0.8 149 chr3L 3593852 intron,5` UTR Eip63E +,snRNA:U7 + chr3L 3593926 intron Eip63E + chr3L 3594001 intron Eip63E + chr3L_5_3590001 chr3L_3590001 RAL-306_125b 1642 chr3L 3593867 3593877 chr3L 3593985 3594012 6 132 7.0 1.5 4.2 1.2 145 chr3L 3593867 intron,5` UTR Eip63E +,snRNA:U7 + chr3L 3593940 intron Eip63E + chr3L 3594012 intron Eip63E + chr3L_6_3590001 chr3L_3590001 RAL-306_125b 1643 chr3L 3598161 3598239 chr3L 3598295 3598360 14 130 4.0 1.0 2.5 4.0 199 chr3L 3598161 exon Eip63E + chr3L 3598260 intron Eip63E + chr3L 3598360 exon Eip63E + chr3L_14_3595001 chr3L_3595001 RAL-306_125b 1644 chr3L 3601271 3601329 chr3L 3606607 3606690 copia 13 5358 6.5 3.5 5.0 2.2 5419 chr3L 3601271 intron Eip63E + chr3L 3603980 intron Eip63E + chr3L 3606690 intron Eip63E + chr3L_13_3600001 chr3L_3600001 RAL-306_125b 1645 chr3L 3609741 3609814 chr3L 3609867 3609951 20 135 5.5 4.5 5.0 3.3 210 chr3L 3609741 3` UTR Eip63E + chr3L 3609846 3` UTR Eip63E + chr3L 3609951 3` UTR Eip63E + chr3L_20_3605001 chr3L_3605001 RAL-306_125b 1646 chr3L 3619386 3619430 chr3L 3619530 3619574 13 144 9.0 12.5 10.8 1.1 188 chr3L 3619386 intergenic not near genes chr3L 3619480 intergenic not near genes chr3L 3619574 intergenic not near genes chr3L_13_3615001 chr3L_3615001 RAL-306_125b 1647 chr3L 3627185 3627256 chr3L 3627340 3627411 19 155 6.0 7.0 6.5 2.5 226 chr3L 3627185 intron dar1 + chr3L 3627298 intron dar1 + chr3L 3627411 intron dar1 + chr3L_19_3625001 chr3L_3625001 RAL-306_125b 1648 chr3L 3766688 3766746 chr3L 3766824 3766882 13 135 7.0 0.0 3.5 2.9 194 chr3L 3766688 intron CG32264 - chr3L 3766785 intron CG32264 - chr3L 3766882 intron CG32264 - chr3L_13_3765001 chr3L_3765001 RAL-306_125b 1649 chr3L 3773230 3773279 chr3L 3773372 3773421 10 132 7.0 7.5 7.2 1.2 191 chr3L 3773230 intron CG32264 - chr3L 3773326 intron CG32264 - chr3L 3773421 intron CG32264 - chr3L_10_3770001 chr3L_3770001 RAL-306_125b 1650 chr3L 3773583 3773666 chr3L 3773712 3773797 14 132 3.5 4.0 3.8 2.9 214 chr3L 3773583 intron CG32264 - chr3L 3773690 intron CG32264 - chr3L 3773797 intron CG32264 - chr3L_14_3770001 chr3L_3770001 RAL-306_125b 1651 chr3L 3783222 3783287 chr3L 3783349 3783414 15 122 9.5 10.0 9.8 1.4 192 chr3L 3783222 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783414 intron CG32264 - chr3L_15_3780001 chr3L_3780001 RAL-306_125b 1652 chr3L 3797190 3797264 chr3L 3797323 3797397 19 131 0.0 8.0 4.0 3.8 207 chr3L 3797190 intron CG32264 - chr3L 3797294 intron CG32264 - chr3L 3797397 intron CG32264 - chr3L_19_3795001 chr3L_3795001 RAL-306_125b 1653 chr3L 3820754 3820825 chr3L 3822300 3822375 12 1550 0.0 9.0 4.5 2.2 1621 chr3L 3820754 intron enc + chr3L 3821564 intron enc + chr3L 3822375 intron enc + chr3L_12_3820001 chr3L_3820001 RAL-306_125b 1654 chr3L 3833691 3833765 chr3L 3833982 3834056 pogo 11 290 6.5 3.5 5.0 1.8 365 chr3L 3833691 intron enc + chr3L 3833874 intron enc + chr3L 3834056 intron enc + chr3L_11_3830001 chr3L_3830001 RAL-306_125b 1655 chr3L 3877424 3877465 chr3L 3877597 3877638 5 172 3.0 12.0 7.5 0.6 214 chr3L 3877424 intergenic not near genes chr3L 3877531 intergenic not near genes chr3L 3877638 intergenic not near genes chr3L_5_3875001 chr3L_3875001 RAL-306_125b 1656 chr3L 3881674 3881688 chr3L 3881809 3881823 5 134 16.0 3.0 9.5 0.5 149 chr3L 3881674 intergenic not near genes chr3L 3881748 intergenic not near genes chr3L 3881823 intergenic not near genes chr3L_5_3880001 chr3L_3880001 RAL-306_125b 1657 chr3L 3912460 3912494 chr3L 3912586 3912610 8 123 10.5 13.5 12.0 0.6 150 chr3L 3912460 intron Eip63F-1 - chr3L 3912535 intron Eip63F-1 - chr3L 3912610 intron Eip63F-1 - chr3L_8_3910001 chr3L_3910001 RAL-306_125b 1658 chr3L 4015697 4015766 chr3L 4015825 4015897 26 132 4.5 2.5 3.5 5.8 200 chr3L 4015697 intergenic not near genes chr3L 4015797 intergenic not near genes chr3L 4015897 intergenic not near genes chr3L_26_4015001 chr3L_4015001 RAL-306_125b 1659 chr3L 4082628 4082700 chr3L 4082757 4082829 18 124 6.0 8.5 7.2 2.2 201 chr3L 4082628 exon Gad1 - chr3L 4082728 intron Gad1 - chr3L 4082829 intron Gad1 - chr3L_18_4080001 chr3L_4080001 RAL-306_125b 1660 chr3L 4146800 4146838 chr3L 4146932 4146970 19 132 2.0 10.5 6.2 2.6 170 chr3L 4146800 intergenic not near genes chr3L 4146885 intergenic not near genes chr3L 4146970 intergenic not near genes chr3L_19_4145001 chr3L_4145001 RAL-306_125b 1661 chr3L 4214487 4214548 chr3L 4214679 4214740 30 192 5.5 6.5 6.0 4.3 253 chr3L 4214487 intron CG43367 + chr3L 4214614 intron CG43367 + chr3L 4214740 intron CG43367 + chr3L_30_4210001 chr3L_4210001 RAL-306_125b 1662 chr3L 4229701 4229765 chr3L 4229826 4229854 21 125 8.5 4.5 6.5 2.8 153 chr3L 4229701 intron ImpL2 - chr3L 4229778 intron ImpL2 - chr3L 4229854 intron ImpL2 - chr3L_21_4225001 chr3L_4225001 RAL-306_125b 1663 chr3L 4328731 4328763 chr3L 4336277 4336310 412 6 7546 2.5 9.0 5.8 0.9 7579 chr3L 4328731 intron Cip4 - chr3L 4332520 intron Cip4 - chr3L 4336310 exon Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-306_125b 1664 chr3L 4341330 4341332 chr3L 21448026 21448026 5 17106695 43.0 31.5 37.2 0.1 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-306_125b 1665 chr3L 4361016 4361026 chr3L 4362921 4362932 5 1906 0.0 5.5 2.8 1.3 1916 chr3L 4361016 intron Cip4 - chr3L 4361974 intron Cip4 - chr3L 4362932 intron Cip4 - chr3L_5_4360001 chr3L_4360001 RAL-306_125b 1666 chr3L 4364147 4364234 chr3L 4364286 4364333 12 136 3.5 6.5 5.0 2.0 186 chr3L 4364147 intergenic Cip4 -,mRpS6 + chr3L 4364240 intergenic Cip4 -,mRpS6 + chr3L 4364333 intergenic mRpS6 +,Cip4 - chr3L_12_4360001 chr3L_4360001 RAL-306_125b 1667 chr3L 4384866 4384915 chr3L 4385009 4385058 11 142 8.5 11.0 9.8 1.0 192 chr3L 4384866 5` UTR slow + chr3L 4384962 intron slow + chr3L 4385058 intron slow + chr3L_11_4380001 chr3L_4380001 RAL-306_125b 1668 chr3L 4389977 4390029 chr3L 4390114 4390166 12 137 5.5 5.5 5.5 1.8 189 chr3L 4389977 intron slow + chr3L 4390072 intron slow + chr3L 4390166 intron slow + chr3L_12_4390001 chr3L_4390001 RAL-306_125b 1669 chr3L 4397397 4397464 chr3L 4397572 4397641 21 175 5.0 5.0 5.0 3.5 244 chr3L 4397397 intron slow + chr3L 4397519 intron slow + chr3L 4397641 intron slow + chr3L_21_4395001 chr3L_4395001 RAL-306_125b 1670 chr3L 4415984 4416052 chr3L 4416116 4416158 21 128 6.0 7.0 6.5 2.8 174 chr3L 4415984 intron DOR + chr3L 4416071 intron DOR + chr3L 4416158 intron DOR + chr3L_21_4415001 chr3L_4415001 RAL-306_125b 1671 chr3L 4440710 4440767 chr3L 4440838 4440898 18 131 5.0 1.0 3.0 4.5 188 chr3L 4440710 intergenic not near genes chr3L 4440804 intergenic not near genes chr3L 4440898 intergenic not near genes chr3L_18_4440001 chr3L_4440001 RAL-306_125b 1672 chr3L 4494573 4494624 chr3L 4494751 4494761 13 172 12.0 0.0 6.0 1.9 188 chr3L 4494573 3` UTR CR44709 - chr3L 4494667 3` UTR CR44709 - chr3L 4494761 3` UTR CR44709 - chr3L_13_4490001 chr3L_4490001 RAL-306_125b 1673 chr3L 4580267 4580328 chr3L 4580390 4580459 20 133 9.5 6.0 7.8 2.3 192 chr3L 4580267 intron CG42540 + chr3L 4580363 intron CG42540 + chr3L 4580459 intron CG42540 + chr3L_20_4580001 chr3L_4580001 RAL-306_125b 1674 chr3L 4599457 4599521 chr3L 4599644 4599674 8 182 0.0 9.0 4.5 1.5 217 chr3L 4599457 intron Src64B - chr3L 4599566 intron Src64B - chr3L 4599674 intron Src64B - chr3L_8_4595001 chr3L_4595001 RAL-306_125b 1675 chr3L 4629558 4629624 chr3L 4629778 4629844 14 220 0.0 3.0 1.5 5.6 286 chr3L 4629558 intergenic axo -,Rpd3 + chr3L 4629701 3` UTR axo - chr3L 4629844 exon axo - chr3L_14_4625001 chr3L_4625001 RAL-306_125b 1676 chr3L 4748640 4748696 chr3L 4748822 4748837 22 179 7.0 5.5 6.2 3.1 197 chr3L 4748640 intron RhoGEF64C + chr3L 4748738 intron RhoGEF64C + chr3L 4748837 intron RhoGEF64C + chr3L_22_4745001 chr3L_4745001 RAL-306_125b 1677 chr3L 4782056 4782125 chr3L 4782206 4782275 31 147 6.5 3.5 5.0 5.2 219 chr3L 4782056 intron RhoGEF64C + chr3L 4782166 intron RhoGEF64C + chr3L 4782275 intron RhoGEF64C + chr3L_31_4780001 chr3L_4780001 RAL-306_125b 1678 chr3L 4784951 4784983 chr3L 4785184 4785241 5 254 0.0 11.0 5.5 0.8 290 chr3L 4784951 intron RhoGEF64C + chr3L 4785096 intron RhoGEF64C + chr3L 4785241 intron RhoGEF64C + chr3L_5_4785001 chr3L_4785001 RAL-306_125b 1679 chr3L 4840353 4840367 chr3L 4840512 4840526 4 159 6.5 0.0 3.2 1.0 173 chr3L 4840353 intergenic CG13707 - chr3L 4840440 intergenic CG13707 - chr3L 4840526 intergenic CG13707 - chr3L_4_4840001 chr3L_4840001 RAL-306_125b 1680 chr3L 4901079 4901155 chr3L 4907318 4907395 diver 17 6238 1.5 4.5 3.0 4.2 6316 chr3L 4901079 intergenic CG13704 + chr3L 4904237 intergenic not near genes chr3L 4907395 intergenic not near genes chr3L_17_4900001 chr3L_4900001 RAL-306_125b 1681 chr3L 4990699 4990715 chr3L 4990863 4990879 4 164 13.0 5.0 9.0 0.4 180 chr3L 4990699 intron Con - chr3L 4990789 intron Con - chr3L 4990879 intron Con - chr3L_4_4990001 chr3L_4990001 RAL-306_125b 1682 chr3L 4990726 4990764 chr3L 4990860 4990928 19 158 6.0 5.0 5.5 2.9 202 chr3L 4990726 intron Con - chr3L 4990827 intron Con - chr3L 4990928 intron Con - chr3L_19_4990001 chr3L_4990001 RAL-306_125b 1683 chr3L 5015608 5015657 chr3L 5015739 5015787 5 129 5.5 1.5 3.5 1.1 179 chr3L 5015608 intron Con - chr3L 5015698 intron Con - chr3L 5015787 intron Con - chr3L_5_5015001 chr3L_5015001 RAL-306_125b 1684 chr3L 5034115 5034186 chr3L 5043317 5043388 roo 23 9201 3.0 10.5 6.8 2.9 9273 chr3L 5034115 intron Con - chr3L 5038752 intron Con - chr3L 5043388 intron Con - chr3L_23_5035001 chr3L_5035001 RAL-306_125b 1685 chr3L 5045417 5045476 chr3L 5050248 5050307 Doc 19 4829 7.0 5.5 6.2 2.6 4890 chr3L 5045417 5` UTR Con - chr3L 5047862 intron Con - chr3L 5050307 intron Con - chr3L_19_5045001 chr3L_5045001 RAL-306_125b 1686 chr3L 5066252 5066314 chr3L 5066399 5066463 24 148 1.0 3.0 2.0 8.0 211 chr3L 5066252 intron Con - chr3L 5066358 intron Con - chr3L 5066463 intron Con - chr3L_24_5065001 chr3L_5065001 RAL-306_125b 1687 chr3L 5066916 5066988 chr3L 5067054 5067125 18 134 2.0 7.5 4.8 3.1 209 chr3L 5066916 intron Con - chr3L 5067020 intron Con - chr3L 5067125 intron Con - chr3L_18_5065001 chr3L_5065001 RAL-306_125b 1688 chr3L 5067995 5068064 chr3L 5068122 5068192 12 122 10.0 7.0 8.5 1.3 197 chr3L 5067995 intron Con - chr3L 5068094 intron Con - chr3L 5068192 intron Con - chr3L_12_5065001 chr3L_5065001 RAL-306_125b 1689 chr3L 5089054 5089143 chr3L 5089191 5089271 17 130 2.0 5.5 3.8 3.5 217 chr3L 5089054 intergenic not near genes chr3L 5089162 intergenic not near genes chr3L 5089271 intergenic not near genes chr3L_17_5085001 chr3L_5085001 RAL-306_125b 1690 chr3L 5101157 5101230 chr3L 5101286 5101355 32 127 6.0 4.0 5.0 5.3 198 chr3L 5101157 intergenic not near genes chr3L 5101256 intergenic not near genes chr3L 5101355 intergenic not near genes chr3L_32_5100001 chr3L_5100001 RAL-306_125b 1691 chr3L 5104433 5104510 chr3L 5124617 5124694 21 20183 6.0 5.0 5.5 3.2 20261 chr3L 5104433 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124694 intergenic not near genes chr3L_21_5110001 chr3L_5110001 RAL-306_125b 1692 chr3L 5164594 5164654 chr3L 5164720 5164777 24 125 8.0 8.0 8.0 2.7 183 chr3L 5164594 intron shep - chr3L 5164686 intron shep - chr3L 5164777 intron shep - chr3L_24_5160001 chr3L_5160001 RAL-306_125b 1693 chr3L 5212188 5212265 chr3L 5212321 5212398 23 132 6.5 4.5 5.5 3.5 210 chr3L 5212188 intron shep - chr3L 5212293 intron shep - chr3L 5212398 intron shep - chr3L_23_5210001 chr3L_5210001 RAL-306_125b 1694 chr3L 5224489 5224524 chr3L 5224775 5224853 12 324 6.0 4.5 5.2 1.9 364 chr3L 5224489 intron shep - chr3L 5224671 intron shep - chr3L 5224853 intron shep - chr3L_12_5220001 chr3L_5220001 RAL-306_125b 1695 chr3L 5251809 5251869 chr3L 5251938 5251998 8 129 4.5 10.0 7.2 1.0 189 chr3L 5251809 intron shep - chr3L 5251904 intron shep - chr3L 5251998 intron shep - chr3L_8_5250001 chr3L_5250001 RAL-306_125b 1696 chr3L 5261115 5261182 chr3L 5261244 5261311 19 129 6.5 6.5 6.5 2.5 196 chr3L 5261115 intron shep - chr3L 5261213 intron shep - chr3L 5261311 intron shep - chr3L_19_5260001 chr3L_5260001 RAL-306_125b 1697 chr3L 5299113 5299175 chr3L 5306599 5306661 Quasimodo 25 7486 10.5 7.5 9.0 2.5 7548 chr3L 5299113 intergenic not near genes chr3L 5302887 intergenic not near genes chr3L 5306661 intergenic not near genes chr3L_25_5300001 chr3L_5300001 RAL-306_125b 1698 chr3L 5307713 5307744 chr3L 5307875 5307906 7 161 7.0 13.0 10.0 0.6 193 chr3L 5307713 intergenic not near genes chr3L 5307810 intergenic not near genes chr3L 5307906 intergenic not near genes chr3L_7_5305001 chr3L_5305001 RAL-306_125b 1699 chr3L 5388158 5388191 chr3L 5388532 5388565 12 373 13.5 5.5 9.5 1.1 407 chr3L 5388158 intergenic not near genes chr3L 5388362 intergenic not near genes chr3L 5388565 intergenic not near genes chr3L_12_5385001 chr3L_5385001 RAL-306_125b 1700 chr3L 5388192 5388227 chr3L 5388531 5388601 12 366 7.5 5.5 6.5 1.6 409 chr3L 5388192 intergenic not near genes chr3L 5388396 intergenic not near genes chr3L 5388601 intergenic not near genes chr3L_12_5385001 chr3L_5385001 RAL-306_125b 1701 chr3L 5393428 5393435 chr3L 5393635 5393647 4 211 11.0 1.5 6.2 0.6 219 chr3L 5393428 intergenic not near genes chr3L 5393538 intergenic not near genes chr3L 5393647 intergenic not near genes chr3L_4_5390001 chr3L_5390001 RAL-306_125b 1702 chr3L 5449492 5449563 chr3L 5449621 5449671 15 127 5.5 8.0 6.8 1.9 179 chr3L 5449492 intergenic not near genes chr3L 5449582 intergenic not near genes chr3L 5449671 intergenic not near genes chr3L_15_5445001 chr3L_5445001 RAL-306_125b 1703 chr3L 5458064 5458079 chr3L 5466664 5466729 Max-element 4 8638 2.0 4.5 3.2 1.0 8665 chr3L 5458064 intergenic not near genes chr3L 5462396 intergenic not near genes chr3L 5466729 intergenic not near genes chr3L_4_5460001 chr3L_5460001 RAL-306_125b 1704 chr3L 5482924 5483084 chr3L 5483159 5483213 6 168 0.0 7.5 3.8 1.2 289 chr3L 5482924 exon CG4835 + chr3L 5483068 exon CG4835 + chr3L 5483213 exon CG4835 + chr3L_6_5480001 chr3L_5480001 RAL-306_125b 1705 chr3L 5493153 5493219 chr3L 5493349 5493385 18 190 9.0 1.0 5.0 3.0 232 chr3L 5493153 intergenic CR44520 - chr3L 5493269 intergenic CR44520 - chr3L 5493385 intergenic CR44520 - chr3L_18_5490001 chr3L_5490001 RAL-306_125b 1706 chr3L 5498346 5498420 chr3L 5498479 5498528 17 131 2.0 10.5 6.2 2.4 182 chr3L 5498346 exon blanks - chr3L 5498437 exon blanks - chr3L 5498528 exon blanks - chr3L_17_5495001 chr3L_5495001 RAL-306_125b 1707 chr3L 5514693 5514763 chr3L 5514820 5514890 25 127 8.0 7.5 7.8 2.8 197 chr3L 5514693 intron Lkr - chr3L 5514792 intron Lkr - chr3L 5514890 intron Lkr - chr3L_25_5510001 chr3L_5510001 RAL-306_125b 1708 chr3L 5537682 5537743 chr3L 5538073 5538135 jockey 24 389 8.0 8.0 8.0 2.7 453 chr3L 5537682 intergenic not near genes chr3L 5537908 intergenic not near genes chr3L 5538135 intergenic CG10625 - chr3L_24_5535001 chr3L_5535001 RAL-306_125b 1709 chr3L 5561617 5561693 chr3L 5561749 5561820 17 132 4.5 6.0 5.2 2.7 203 chr3L 5561617 intergenic sinu -,Sucb - chr3L 5561718 3` UTR Sucb - chr3L 5561820 3` UTR Sucb - chr3L_17_5560001 chr3L_5560001 RAL-306_125b 1710 chr3L 5727155 5727196 chr3L 5727647 5727718 8 516 7.0 3.0 5.0 1.3 563 chr3L 5727155 intron sif + chr3L 5727436 intron sif + chr3L 5727718 intron sif + chr3L_8_5725001 chr3L_5725001 RAL-306_125b 1711 chr3L 5836927 5836979 chr3L 5837066 5837098 9 130 9.0 0.5 4.8 1.6 171 chr3L 5836927 intron vn - chr3L 5837012 intron vn - chr3L 5837098 intron vn - chr3L_9_5835001 chr3L_5835001 RAL-306_125b 1712 chr3L 5908058 5908102 chr3L 5908188 5908232 6 130 1.5 14.0 7.8 0.7 174 chr3L 5908058 intron CG13288 + chr3L 5908145 intron CG13288 + chr3L 5908232 intron CG13288 + chr3L_6_5905001 chr3L_5905001 RAL-306_125b 1713 chr3L 5909986 5910055 chr3L 5910278 5910346 pogo 30 289 4.5 13.0 8.8 3.1 360 chr3L 5909986 intron CG13288 + chr3L 5910166 intron CG13288 + chr3L 5910346 intron CG13288 + chr3L_30_5910001 chr3L_5910001 RAL-306_125b 1714 chr3L 5926283 5926350 chr3L 5926510 5926543 16 233 5.0 6.0 5.5 2.5 260 chr3L 5926283 intron Vap-33B + chr3L 5926413 intron Vap-33B + chr3L 5926543 intron Vap-33B + chr3L_16_5925001 chr3L_5925001 RAL-306_125b 1715 chr3L 5983786 5983856 chr3L 5983957 5984011 12 169 5.5 0.0 2.8 3.2 225 chr3L 5983786 3` UTR CR45439 - chr3L 5983898 intergenic CR45439 -,CR45440 - chr3L 5984011 intergenic CR45440 -,CR45439 - chr3L_12_5980001 chr3L_5980001 RAL-306_125b 1716 chr3L 5986995 5987042 chr3L 5987126 5987163 13 130 8.5 6.5 7.5 1.5 168 chr3L 5986995 intergenic not near genes chr3L 5987079 intergenic not near genes chr3L 5987163 intergenic not near genes chr3L_13_5985001 chr3L_5985001 RAL-306_125b 1717 chr3L 6001638 6001651 chr3L 6004388 6004401 jockey 6 2749 6.5 0.0 3.2 1.4 2763 chr3L 6001638 intron PVRAP + chr3L 6003020 intron PVRAP + chr3L 6004401 intron PVRAP + chr3L_6_6000001 chr3L_6000001 RAL-306_125b 1718 chr3L 6001657 6001717 chr3L 6004387 6004467 jockey 12 2748 5.0 0.0 2.5 3.4 2810 chr3L 6001657 intron PVRAP + chr3L 6003062 intron PVRAP + chr3L 6004467 intron PVRAP + chr3L_12_6000001 chr3L_6000001 RAL-306_125b 1719 chr3L 6040320 6040393 chr3L 6042726 6042768 Doc 14 2402 6.5 0.0 3.2 3.3 2448 chr3L 6040320 intergenic Jon65Aiv + chr3L 6041544 intergenic not near genes chr3L 6042768 intergenic not near genes chr3L_14_6040001 chr3L_6040001 RAL-306_125b 1720 chr3L 6052125 6052152 chr3L 6052261 6052288 6 136 2.5 14.5 8.5 0.6 163 chr3L 6052125 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052206 intergenic Jon65Aii + chr3L 6052288 intergenic Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-306_125b 1721 chr3L 6052618 6052639 chr3L 6052748 6052767 4 132 4.0 9.0 6.5 0.5 149 chr3L 6052618 exon Jon65Aii + chr3L 6052692 intron Jon65Aii + chr3L 6052767 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-306_125b 1722 chr3L 6116681 6116722 chr3L 6116816 6116857 6 135 4.5 1.0 2.8 1.6 176 chr3L 6116681 intron Ets65A + chr3L 6116769 intron Ets65A + chr3L 6116857 intron Ets65A + chr3L_6_6115001 chr3L_6115001 RAL-306_125b 1723 chr3L 6155653 6155712 chr3L 6155789 6155848 25 134 11.5 6.0 8.8 2.6 195 chr3L 6155653 intergenic CR45421 - chr3L 6155750 intergenic not near genes chr3L 6155848 intergenic not near genes chr3L_25_6155001 chr3L_6155001 RAL-306_125b 1724 chr3L 6159892 6159955 chr3L 6160020 6160094 6 137 9.0 2.0 5.5 0.9 202 chr3L 6159892 intergenic not near genes chr3L 6159993 intergenic not near genes chr3L 6160094 intergenic not near genes chr3L_6_6155001 chr3L_6155001 RAL-306_125b 1725 chr3L 6165046 6165099 chr3L 6165200 6165253 14 154 5.0 8.0 6.5 1.9 207 chr3L 6165046 3` UTR CG10289 - chr3L 6165150 3` UTR CG10289 - chr3L 6165253 3` UTR CG10289 - chr3L_14_6165001 chr3L_6165001 RAL-306_125b 1726 chr3L 6169085 6169134 chr3L 6169216 6169265 10 130 8.5 12.0 10.2 0.9 180 chr3L 6169085 3` UTR CG10289 - chr3L 6169175 3` UTR CG10289 - chr3L 6169265 3` UTR CG10289 - chr3L_10_6165001 chr3L_6165001 RAL-306_125b 1727 chr3L 6220875 6220941 chr3L 6230077 6230113 roo 15 9200 8.0 7.0 7.5 1.8 9238 chr3L 6220875 5` UTR pncr008:3L + chr3L 6225494 intergenic not near genes chr3L 6230113 intergenic not near genes chr3L_15_6225001 chr3L_6225001 RAL-306_125b 1728 chr3L 6267269 6267338 chr3L 6267407 6267475 30 137 8.0 9.0 8.5 3.2 206 chr3L 6267269 intergenic not near genes chr3L 6267372 intergenic not near genes chr3L 6267475 intergenic not near genes chr3L_30_6265001 chr3L_6265001 RAL-306_125b 1729 chr3L 6334963 6335034 chr3L 6335484 6335555 297 23 520 4.0 6.0 5.0 3.8 592 chr3L 6334963 intron CG13300 - chr3L 6335259 intron CG13300 - chr3L 6335555 intron CG13300 - chr3L_23_6335001 chr3L_6335001 RAL-306_125b 1730 chr3L 6369716 6369764 chr3L 6369870 6369917 4 154 11.5 0.0 5.8 0.6 201 chr3L 6369716 intergenic CR45419 - chr3L 6369816 intergenic CR45419 - chr3L 6369917 intergenic CR45419 - chr3L_4_6365001 chr3L_6365001 RAL-306_125b 1731 chr3L 6371396 6371450 chr3L 6371525 6371533 12 125 2.5 2.5 2.5 3.4 137 chr3L 6371396 intergenic not near genes chr3L 6371464 intergenic not near genes chr3L 6371533 intergenic not near genes chr3L_12_6370001 chr3L_6370001 RAL-306_125b 1732 chr3L 6405624 6405630 chr3L 6432138 6432144 roo 4 26514 16.5 8.0 12.2 0.3 26520 chr3L 6405624 intron CG42747 + chr3L 6418884 intron CG42747 + chr3L 6432144 intron CG42747 + chr3L_4_6415001 chr3L_6415001 RAL-306_125b 1733 chr3L 6405633 6405683 chr3L 6432134 6432197 roo 19 26513 10.5 8.0 9.2 1.9 26564 chr3L 6405633 intron CG42747 + chr3L 6418915 intron CG42747 + chr3L 6432197 intron CG42747 + chr3L_19_6415001 chr3L_6415001 RAL-306_125b 1734 chr3L 6620567 6620599 chr3L 6621057 6621081 Rt1c 14 488 7.0 15.5 11.2 1.1 514 chr3L 6620567 intergenic not near genes chr3L 6620824 intergenic not near genes chr3L 6621081 intergenic not near genes chr3L_14_6620001 chr3L_6620001 RAL-306_125b 1735 chr3L 6632370 6632433 chr3L 6632508 6632570 16 137 6.0 5.0 5.5 2.5 200 chr3L 6632370 exon GluRIA + chr3L 6632470 intron GluRIA + chr3L 6632570 intron GluRIA + chr3L_16_6630001 chr3L_6630001 RAL-306_125b 1736 chr3L 6722047 6722106 chr3L 6722174 6722218 21 123 8.5 10.0 9.2 2.1 171 chr3L 6722047 intergenic not near genes chr3L 6722132 intergenic not near genes chr3L 6722218 intergenic not near genes chr3L_21_6720001 chr3L_6720001 RAL-306_125b 1737 chr3L 6781087 6781151 chr3L 6783150 6783196 Doc 19 2060 5.5 0.0 2.8 5.0 2109 chr3L 6781087 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783196 intergenic not near genes chr3L_19_6780001 chr3L_6780001 RAL-306_125b 1738 chr3L 6810034 6810081 chr3L 6810173 6810219 8 134 6.5 6.5 6.5 1.1 185 chr3L 6810034 intergenic not near genes chr3L 6810126 intergenic not near genes chr3L 6810219 intergenic not near genes chr3L_8_6810001 chr3L_6810001 RAL-306_125b 1739 chr3L 6820593 6820625 chr3L 6820727 6820759 13 134 16.0 14.5 15.2 0.8 166 chr3L 6820593 intergenic not near genes chr3L 6820676 intergenic not near genes chr3L 6820759 intergenic not near genes chr3L_13_6820001 chr3L_6820001 RAL-306_125b 1740 chr3L 6835880 6835922 chr3L 6836008 6836050 8 127 4.0 7.0 5.5 1.2 170 chr3L 6835880 intergenic not near genes chr3L 6835965 intergenic not near genes chr3L 6836050 intergenic not near genes chr3L_8_6835001 chr3L_6835001 RAL-306_125b 1741 chr3L 6855888 6855945 chr3L 6860717 6860780 Doc 9 4833 3.5 4.0 3.8 1.9 4892 chr3L 6855888 intergenic not near genes chr3L 6858334 intergenic not near genes chr3L 6860780 intergenic not near genes chr3L_9_6855001 chr3L_6855001 RAL-306_125b 1742 chr3L 6875202 6875228 chr3L 6875329 6875337 7 124 10.0 3.0 6.5 0.9 135 chr3L 6875202 intergenic not near genes chr3L 6875270 intergenic not near genes chr3L 6875337 intergenic not near genes chr3L_7_6875001 chr3L_6875001 RAL-306_125b 1743 chr3L 6887476 6887535 chr3L 6895018 6895077 roo 24 7541 7.0 5.0 6.0 3.4 7601 chr3L 6887476 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895077 intergenic not near genes chr3L_24_6890001 chr3L_6890001 RAL-306_125b 1744 chr3L 6907968 6908036 chr3L 6908103 6908164 12 129 9.5 0.0 4.8 2.1 196 chr3L 6907968 intergenic not near genes chr3L 6908066 intergenic not near genes chr3L 6908164 intergenic not near genes chr3L_12_6905001 chr3L_6905001 RAL-306_125b 1745 chr3L 6994847 6994905 chr3L 6995498 6995566 BS 9 658 0.5 10.0 5.2 1.5 719 chr3L 6994847 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995566 intergenic not near genes chr3L_9_6995001 chr3L_6995001 RAL-306_125b 1746 chr3L 7086791 7086852 chr3L 7086920 7086982 7 130 4.0 0.0 2.0 2.3 191 chr3L 7086791 intergenic Cpr65Ea - chr3L 7086886 intergenic Cpr65Ea - chr3L 7086982 intergenic Cpr65Ea - chr3L_7_7085001 chr3L_7085001 RAL-306_125b 1747 chr3L 7091487 7091521 chr3L 7091611 7091630 12 116 18.0 7.0 12.5 0.9 143 chr3L 7091487 intergenic not near genes chr3L 7091558 intergenic not near genes chr3L 7091630 intergenic not near genes chr3L_12_7090001 chr3L_7090001 RAL-306_125b 1748 chr3L 7091526 7091550 chr3L 7091608 7091676 10 107 10.5 7.5 9.0 1.0 150 chr3L 7091526 intergenic not near genes chr3L 7091601 intergenic not near genes chr3L 7091676 intergenic not near genes chr3L_10_7090001 chr3L_7090001 RAL-306_125b 1749 chr3L 7150868 7150893 chr3L 7150994 7151019 8 126 9.0 17.0 13.0 0.6 151 chr3L 7150868 intron corn - chr3L 7150944 intron corn - chr3L 7151019 intron corn - chr3L_8_7150001 chr3L_7150001 RAL-306_125b 1750 chr3L 7216079 7216138 chr3L 7216192 7216246 13 123 5.0 4.5 4.8 2.2 167 chr3L 7216079 intergenic not near genes chr3L 7216162 intergenic not near genes chr3L 7216246 intergenic not near genes chr3L_13_7215001 chr3L_7215001 RAL-306_125b 1751 chr3L 7222935 7223000 chr3L 7223054 7223116 23 128 4.0 9.5 6.8 2.9 181 chr3L 7222935 5` UTR CR45410 + chr3L 7223026 5` UTR CR45410 + chr3L 7223116 5` UTR CR45410 + chr3L_23_7220001 chr3L_7220001 RAL-306_125b 1752 chr3L 7258880 7258929 chr3L 7259070 7259119 14 189 2.0 7.5 4.8 2.4 239 chr3L 7258880 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259119 intron CG14830 - chr3L_14_7255001 chr3L_7255001 RAL-306_125b 1753 chr3L 7264821 7264895 chr3L 7264967 7265028 12 137 0.5 5.5 3.0 3.0 207 chr3L 7264821 intergenic not near genes chr3L 7264924 intergenic not near genes chr3L 7265028 intergenic not near genes chr3L_12_7260001 chr3L_7260001 RAL-306_125b 1754 chr3L 7285398 7285461 chr3L 7285526 7285589 29 128 3.5 4.0 3.8 6.0 191 chr3L 7285398 intron unc-13-4A - chr3L 7285494 intron unc-13-4A - chr3L 7285589 intron unc-13-4A - chr3L_29_7285001 chr3L_7285001 RAL-306_125b 1755 chr3L 7308138 7308211 chr3L 7308264 7308327 20 126 9.5 5.0 7.2 2.4 189 chr3L 7308138 intron unc-13-4A - chr3L 7308232 intron unc-13-4A - chr3L 7308327 intron unc-13-4A - chr3L_20_7305001 chr3L_7305001 RAL-306_125b 1756 chr3L 7318211 7318237 chr3L 7318338 7318364 6 126 6.5 10.0 8.2 0.7 153 chr3L 7318211 intergenic not near genes chr3L 7318288 intergenic not near genes chr3L 7318364 intergenic not near genes chr3L_6_7315001 chr3L_7315001 RAL-306_125b 1757 chr3L 7328898 7328957 chr3L 7329029 7329088 13 131 5.0 3.5 4.2 2.5 190 chr3L 7328898 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7328993 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329088 intergenic CG42307 +,mus312 +,CG8602 - chr3L_13_7325001 chr3L_7325001 RAL-306_125b 1758 chr3L 7377272 7377341 chr3L 7380427 7380496 297 26 3152 5.0 7.0 6.0 3.7 3224 chr3L 7377272 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380496 intron SMSr - chr3L_26_7375001 chr3L_7375001 RAL-306_125b 1759 chr3L 7422845 7422909 chr3L 7422981 7423045 8 135 4.5 0.0 2.2 2.5 200 chr3L 7422845 intergenic not near genes chr3L 7422945 intergenic not near genes chr3L 7423045 intergenic not near genes chr3L_8_7420001 chr3L_7420001 RAL-306_125b 1760 chr3L 7436093 7436145 chr3L 7436213 7436273 15 122 5.5 6.5 6.0 2.1 180 chr3L 7436093 intron CG42458 + chr3L 7436183 intron CG42458 + chr3L 7436273 intron CG42458 + chr3L_15_7435001 chr3L_7435001 RAL-306_125b 1761 chr3L 7442900 7442919 chr3L 7443045 7443063 6 144 13.0 4.0 8.5 0.6 163 chr3L 7442900 intron CG42458 + chr3L 7442982 intron CG42458 + chr3L 7443063 intron CG42458 + chr3L_6_7440001 chr3L_7440001 RAL-306_125b 1762 chr3L 7442921 7442964 chr3L 7443044 7443109 21 128 5.5 4.0 4.8 3.6 188 chr3L 7442921 intron CG42458 + chr3L 7443015 intron CG42458 + chr3L 7443109 intron CG42458 + chr3L_21_7440001 chr3L_7440001 RAL-306_125b 1763 chr3L 7449426 7449450 chr3L 7449556 7449580 8 129 2.5 16.0 9.2 0.8 154 chr3L 7449426 intron CG42458 + chr3L 7449503 intron CG42458 + chr3L 7449580 intron CG42458 + chr3L_8_7445001 chr3L_7445001 RAL-306_125b 1764 chr3L 7450643 7450711 chr3L 7450775 7450841 14 131 6.5 5.5 6.0 2.0 198 chr3L 7450643 intron CG42458 + chr3L 7450742 intron CG42458 + chr3L 7450841 intron CG42458 + chr3L_14_7450001 chr3L_7450001 RAL-306_125b 1765 chr3L 7455235 7455297 chr3L 7455398 7455459 12 162 0.0 6.0 3.0 3.0 224 chr3L 7455235 intergenic not near genes chr3L 7455347 intergenic not near genes chr3L 7455459 intergenic not near genes chr3L_12_7455001 chr3L_7455001 RAL-306_125b 1766 chr3L 7498727 7498773 chr3L 7503554 7503600 F-element 20 4826 10.0 14.5 12.2 1.5 4873 chr3L 7498727 5` UTR CG8539 - chr3L 7501164 intergenic not near genes chr3L 7503600 intergenic not near genes chr3L_20_7500001 chr3L_7500001 RAL-306_125b 1767 chr3L 7591101 7591175 chr3L 7591239 7591291 16 132 8.0 6.5 7.2 2.0 190 chr3L 7591101 intergenic CG7716 - chr3L 7591196 intergenic CG7716 - chr3L 7591291 intergenic CG7716 - chr3L_16_7590001 chr3L_7590001 RAL-306_125b 1768 chr3L 7617647 7617689 chr3L 7617806 7617848 6 154 8.0 1.0 4.5 1.1 201 chr3L 7617647 intron CG33275 + chr3L 7617748 intron CG33275 + chr3L 7617848 intron CG33275 + chr3L_6_7615001 chr3L_7615001 RAL-306_125b 1769 chr3L 7727102 7727172 chr3L 7727233 7727303 33 130 5.0 8.0 6.5 4.4 201 chr3L 7727102 intron CG32373 + chr3L 7727202 intron CG32373 + chr3L 7727303 intron CG32373 + chr3L_33_7725001 chr3L_7725001 RAL-306_125b 1770 chr3L 7793668 7793731 chr3L 7800770 7800813 297 23 7101 7.5 6.5 7.0 2.9 7145 chr3L 7793668 intron CG32369 - chr3L 7797240 intron CG32369 - chr3L 7800813 intron CG32369 - chr3L_23_7795001 chr3L_7795001 RAL-306_125b 1771 chr3L 7806109 7806178 chr3L 7806242 7806286 8 130 4.5 0.0 2.2 2.5 177 chr3L 7806109 intron CG32369 - chr3L 7806198 intron CG32369 - chr3L 7806286 intron CG32369 - chr3L_8_7805001 chr3L_7805001 RAL-306_125b 1772 chr3L 7845340 7845418 chr3L 7845473 7845550 20 132 6.5 5.0 5.8 2.9 210 chr3L 7845340 intron Pdp1 - chr3L 7845445 intron Pdp1 - chr3L 7845550 intron Pdp1 - chr3L_20_7845001 chr3L_7845001 RAL-306_125b 1773 chr3L 7867771 7867799 chr3L 7867891 7867927 7 126 8.5 5.5 7.0 0.9 156 chr3L 7867771 intergenic Pdp1 - chr3L 7867849 intergenic Pdp1 - chr3L 7867927 intergenic not near genes chr3L_7_7865001 chr3L_7865001 RAL-306_125b 1774 chr3L 7868450 7868494 chr3L 7868811 7868848 5 360 0.0 8.0 4.0 1.0 398 chr3L 7868450 intergenic not near genes chr3L 7868649 intergenic CG32365 + chr3L 7868848 intergenic CG32365 + chr3L_5_7865001 chr3L_7865001 RAL-306_125b 1775 chr3L 7869617 7869668 chr3L 7869747 7869752 8 120 11.0 4.5 7.8 0.9 135 chr3L 7869617 exon CG32365 + chr3L 7869684 exon CG32365 + chr3L 7869752 exon CG32365 + chr3L_8_7865001 chr3L_7865001 RAL-306_125b 1776 chr3L 7876084 7876127 chr3L 7876213 7876256 10 128 0.0 0.0 0.0 10.0 172 chr3L 7876084 intron CG32365 + chr3L 7876170 intron CG32365 + chr3L 7876256 intron CG32365 + chr3L_10_7875001 chr3L_7875001 RAL-306_125b 1777 chr3L 7886517 7886540 chr3L 7889086 7889109 Stalker4 10 2569 1.0 12.5 6.8 1.3 2592 chr3L 7886517 intron CG32365 + chr3L 7887813 intron CG32365 + chr3L 7889109 intron CG32365 + chr3L_10_7885001 chr3L_7885001 RAL-306_125b 1778 chr3L 7916790 7916861 chr3L 7926011 7926070 roo 20 9218 7.5 7.5 7.5 2.4 9280 chr3L 7916790 3` UTR syd - chr3L 7921430 intron syd - chr3L 7926070 3` UTR syd - chr3L_20_7920001 chr3L_7920001 RAL-306_125b 1779 chr3L 7982944 7982968 chr3L 7983059 7983106 10 131 12.0 4.0 8.0 1.1 162 chr3L 7982944 intron nmo + chr3L 7983025 intron nmo + chr3L 7983106 intron nmo + chr3L_10_7980001 chr3L_7980001 RAL-306_125b 1780 chr3L 7982973 7982991 chr3L 7983054 7983129 7 127 7.5 3.0 5.2 1.1 156 chr3L 7982973 intron nmo + chr3L 7983051 intron nmo + chr3L 7983129 intron nmo + chr3L_7_7980001 chr3L_7980001 RAL-306_125b 1781 chr3L 7985332 7985390 chr3L 7987711 7987769 NOF 15 2375 8.0 9.0 8.5 1.6 2437 chr3L 7985332 intron nmo + chr3L 7986550 intron nmo + chr3L 7987769 intron nmo + chr3L_15_7985001 chr3L_7985001 RAL-306_125b 1782 chr3L 7995910 7995968 chr3L 7996068 7996119 12 155 7.5 0.0 3.8 2.5 209 chr3L 7995910 intron nmo + chr3L 7996014 intron nmo + chr3L 7996119 intron nmo + chr3L_12_7995001 chr3L_7995001 RAL-306_125b 1783 chr3L 8019659 8019730 chr3L 8024120 8024171 NOF 4 4450 5.5 7.0 6.2 0.6 4512 chr3L 8019659 intron nmo + chr3L 8021915 intron nmo + chr3L 8024171 intron nmo + chr3L_4_8020001 chr3L_8020001 RAL-306_125b 1784 chr3L 8041513 8041570 chr3L 8041635 8041698 23 127 8.5 10.0 9.2 2.3 185 chr3L 8041513 intron nmo + chr3L 8041606 intron nmo + chr3L 8041698 intron nmo + chr3L_23_8040001 chr3L_8040001 RAL-306_125b 1785 chr3L 8081228 8081305 chr3L 8081381 8081443 20 152 3.5 4.5 4.0 4.0 215 chr3L 8081228 intron Ect4 + chr3L 8081336 intron Ect4 + chr3L 8081443 intron Ect4 + chr3L_20_8080001 chr3L_8080001 RAL-306_125b 1786 chr3L 8219504 8219570 chr3L 8219845 8219911 15 340 6.0 0.5 3.2 3.6 407 chr3L 8219504 intergenic not near genes chr3L 8219708 intergenic not near genes chr3L 8219911 intergenic not near genes chr3L_15_8215001 chr3L_8215001 RAL-306_125b 1787 chr3L 8226663 8226749 chr3L 8226812 8226891 9 147 1.5 0.0 0.8 5.0 228 chr3L 8226663 intergenic not near genes chr3L 8226777 intergenic not near genes chr3L 8226891 intergenic not near genes chr3L_9_8225001 chr3L_8225001 RAL-306_125b 1788 chr3L 8233543 8233578 chr3L 8238853 8238888 Rt1a 10 5308 2.0 10.5 6.2 1.4 5345 chr3L 8233543 intron CG7213 - chr3L 8236216 intron CG7213 - chr3L 8238888 intron,intron CG7213 -,Dscam4 + chr3L_10_8235001 chr3L_8235001 RAL-306_125b 1789 chr3L 8295751 8295814 chr3L 8295959 8296007 27 206 8.5 10.5 9.5 2.6 256 chr3L 8295751 intergenic CG7201 - chr3L 8295879 intergenic not near genes chr3L 8296007 intergenic not near genes chr3L_27_8295001 chr3L_8295001 RAL-306_125b 1790 chr3L 8364480 8364535 chr3L 8364620 8364633 15 138 8.5 9.0 8.8 1.5 153 chr3L 8364480 intergenic not near genes chr3L 8364556 intergenic not near genes chr3L 8364633 intergenic not near genes chr3L_15_8360001 chr3L_8360001 RAL-306_125b 1791 chr3L 8369899 8369914 chr3L 8370012 8370041 7 122 16.5 15.0 15.8 0.4 142 chr3L 8369899 intergenic not near genes chr3L 8369970 intergenic not near genes chr3L 8370041 intergenic not near genes chr3L_7_8365001 chr3L_8365001 RAL-306_125b 1792 chr3L 8396065 8396140 chr3L 8396193 8396253 13 125 9.5 5.5 7.5 1.5 188 chr3L 8396065 5` UTR CG7120 + chr3L 8396159 5` UTR CG7120 + chr3L 8396253 intron CG7120 + chr3L_13_8395001 chr3L_8395001 RAL-306_125b 1793 chr3L 8443519 8443581 chr3L 8443650 8443713 18 132 7.5 4.5 6.0 2.6 194 chr3L 8443519 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443713 3` UTR CG6983 - chr3L_18_8440001 chr3L_8440001 RAL-306_125b 1794 chr3L 8456434 8456485 chr3L 8456577 8456612 21 141 10.0 10.5 10.2 1.9 178 chr3L 8456434 intron Gug + chr3L 8456523 intron Gug + chr3L 8456612 intron Gug + chr3L_21_8455001 chr3L_8455001 RAL-306_125b 1795 chr3L 8481742 8481801 chr3L 8490934 8490939 roo 12 9193 4.0 6.5 5.2 1.9 9197 chr3L 8481742 intron CG43163 - chr3L 8486340 intron CG43163 - chr3L 8490939 intron CG43163 - chr3L_12_8485001 chr3L_8485001 RAL-306_125b 1796 chr3L 8498254 8498321 chr3L 8505768 8505838 blood 19 7515 0.5 9.5 5.0 3.2 7584 chr3L 8498254 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505838 intron CG43163 - chr3L_19_8500001 chr3L_8500001 RAL-306_125b 1797 chr3L 8576233 8576275 chr3L 8576377 8576394 11 140 3.0 4.5 3.8 2.3 161 chr3L 8576233 intergenic CG6638 - chr3L 8576314 intergenic CG6638 -,CG43078 + chr3L 8576394 intergenic CG6638 -,CG43078 + chr3L_11_8575001 chr3L_8575001 RAL-306_125b 1798 chr3L 8579805 8579816 chr3L 8579935 8579946 5 130 12.0 8.0 10.0 0.5 141 chr3L 8579805 intron CG43078 + chr3L 8579876 intron CG43078 + chr3L 8579946 intron CG43078 + chr3L_5_8575001 chr3L_8575001 RAL-306_125b 1799 chr3L 8579825 8579876 chr3L 8579930 8580006 14 119 4.0 8.0 6.0 2.0 181 chr3L 8579825 intron CG43078 + chr3L 8579916 intron CG43078 + chr3L 8580006 intron CG43078 + chr3L_14_8575001 chr3L_8575001 RAL-306_125b 1800 chr3L 8614989 8615060 chr3L 8615118 8615189 18 129 5.0 6.0 5.5 2.8 200 chr3L 8614989 exon CG6282 + chr3L 8615089 intron CG6282 + chr3L 8615189 intron CG6282 + chr3L_18_8615001 chr3L_8615001 RAL-306_125b 1801 chr3L 8642687 8642711 chr3L 8642801 8642802 11 124 7.5 4.5 6.0 1.6 115 chr3L 8642687 intron Cpr66D + chr3L 8642744 intron Cpr66D + chr3L 8642802 intron Cpr66D + chr3L_11_8640001 chr3L_8640001 RAL-306_125b 1802 chr3L 8751660 8751702 chr3L 8751790 8751817 12 129 6.0 10.0 8.0 1.3 157 chr3L 8751660 3` UTR CR44527 - chr3L 8751738 intergenic CR44527 - chr3L 8751817 intergenic CR44527 - chr3L_12_8750001 chr3L_8750001 RAL-306_125b 1803 chr3L 8791234 8791286 chr3L 8796704 8796755 I-element 6 5458 7.0 0.5 3.8 1.2 5521 chr3L 8791234 exon Fhos + chr3L 8793994 intron Fhos + chr3L 8796755 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-306_125b 1804 chr3L 8791288 8791305 chr3L 8796702 8796774 I-element 6 5460 4.5 0.5 2.5 1.7 5486 chr3L 8791288 exon Fhos + chr3L 8794031 intron Fhos + chr3L 8796774 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-306_125b 1805 chr3L 8827041 8827116 chr3L 8827308 8827376 12 265 3.0 6.5 4.8 2.1 335 chr3L 8827041 intergenic dally + chr3L 8827208 intergenic dally + chr3L 8827376 intergenic dally + chr3L_12_8825001 chr3L_8825001 RAL-306_125b 1806 chr3L 8827518 8827562 chr3L 8827634 8827667 5 119 8.0 11.0 9.5 0.5 149 chr3L 8827518 5` UTR dally + chr3L 8827592 5` UTR dally + chr3L 8827667 5` UTR dally + chr3L_5_8825001 chr3L_8825001 RAL-306_125b 1807 chr3L 8839676 8839751 chr3L 8839806 8839881 20 130 6.5 2.5 4.5 3.6 205 chr3L 8839676 intron dally + chr3L 8839778 intron dally + chr3L 8839881 intron dally + chr3L_20_8835001 chr3L_8835001 RAL-306_125b 1808 chr3L 8928218 8928296 chr3L 8928344 8928400 16 125 6.0 7.5 6.8 2.1 182 chr3L 8928218 intron Tsp66E + chr3L 8928309 intron Tsp66E + chr3L 8928400 intron Tsp66E + chr3L_16_8925001 chr3L_8925001 RAL-306_125b 1809 chr3L 8959351 8959396 chr3L 8959562 8959607 17 211 5.5 7.5 6.5 2.3 256 chr3L 8959351 intron CG13313 + chr3L 8959479 intron CG13313 + chr3L 8959607 intron CG13313 + chr3L_17_8955001 chr3L_8955001 RAL-306_125b 1810 chr3L 9003905 9003972 chr3L 9004035 9004107 31 132 7.5 9.5 8.5 3.3 202 chr3L 9003905 intergenic not near genes chr3L 9004006 intergenic not near genes chr3L 9004107 intergenic not near genes chr3L_31_9000001 chr3L_9000001 RAL-306_125b 1811 chr3L 9009916 9009977 chr3L 9010070 9010131 13 154 4.0 11.0 7.5 1.5 215 chr3L 9009916 intergenic CG5194 - chr3L 9010024 intergenic CG5194 - chr3L 9010131 intergenic CG5194 - chr3L_13_9010001 chr3L_9010001 RAL-306_125b 1812 chr3L 9024458 9024527 chr3L 9024588 9024657 20 129 6.5 6.5 6.5 2.7 199 chr3L 9024458 intergenic not near genes chr3L 9024558 intergenic not near genes chr3L 9024657 intergenic not near genes chr3L_20_9020001 chr3L_9020001 RAL-306_125b 1813 chr3L 9029111 9029181 chr3L 9029246 9029321 13 134 4.0 0.0 2.0 4.3 210 chr3L 9029111 intergenic not near genes chr3L 9029216 intergenic not near genes chr3L 9029321 intergenic not near genes chr3L_13_9025001 chr3L_9025001 RAL-306_125b 1814 chr3L 9030384 9030456 chr3L 9030510 9030585 17 128 5.0 4.5 4.8 2.9 201 chr3L 9030384 intergenic not near genes chr3L 9030484 intergenic not near genes chr3L 9030585 intergenic not near genes chr3L_17_9030001 chr3L_9030001 RAL-306_125b 1815 chr3L 9047046 9047112 chr3L 9047183 9047249 22 136 0.0 3.5 1.8 7.9 203 chr3L 9047046 intergenic CG5144 + chr3L 9047148 intergenic CG5144 + chr3L 9047249 intergenic CG5144 + chr3L_22_9045001 chr3L_9045001 RAL-306_125b 1816 chr3L 9067271 9067345 chr3L 9067400 9067474 24 129 4.0 8.5 6.2 3.3 203 chr3L 9067271 3` UTR CG4911 - chr3L 9067372 3` UTR CG4911 - chr3L 9067474 3` UTR CG4911 - chr3L_24_9065001 chr3L_9065001 RAL-306_125b 1817 chr3L 9076892 9076939 chr3L 9084502 9084549 412 11 7609 10.0 10.5 10.2 1.0 7657 chr3L 9076892 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084549 exon Tequila + chr3L_11_9080001 chr3L_9080001 RAL-306_125b 1818 chr3L 9086195 9086222 chr3L 9086328 9086345 6 131 18.0 21.0 19.5 0.3 150 chr3L 9086195 exon Tequila + chr3L 9086270 exon Tequila + chr3L 9086345 exon Tequila + chr3L_6_9085001 chr3L_9085001 RAL-306_125b 1819 chr3L 9130516 9130529 chr3L 9134327 9134339 412 5 3810 8.0 3.0 5.5 0.8 3823 chr3L 9130516 intergenic bol - chr3L 9132428 intergenic not near genes chr3L 9134339 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-306_125b 1820 chr3L 9130530 9130577 chr3L 9134320 9134388 412 9 3809 5.0 2.0 3.5 2.0 3858 chr3L 9130530 intergenic bol - chr3L 9132459 intergenic not near genes chr3L 9134388 intergenic Dhpr + chr3L_9_9130001 chr3L_9130001 RAL-306_125b 1821 chr3L 9164653 9164681 chr3L 9166170 9166198 hobo 10 1517 17.0 0.5 8.8 1.0 1545 chr3L 9164653 intron Rdl - chr3L 9165426 intron Rdl - chr3L 9166198 intron Rdl - chr3L_10_9165001 chr3L_9165001 RAL-306_125b 1822 chr3L 9219214 9219260 chr3L 9219936 9219980 jockey 11 717 13.0 11.0 12.0 0.8 766 chr3L 9219214 intergenic not near genes chr3L 9219597 intergenic not near genes chr3L 9219980 intergenic not near genes chr3L_11_9215001 chr3L_9215001 RAL-306_125b 1823 chr3L 9237519 9237527 chr3L 9237648 9237656 7 129 9.5 7.0 8.2 0.8 137 chr3L 9237519 intergenic not near genes chr3L 9237588 intergenic not near genes chr3L 9237656 intergenic not near genes chr3L_7_9235001 chr3L_9235001 RAL-306_125b 1824 chr3L 9260538 9260567 chr3L 9260642 9260666 5 110 5.0 4.5 4.8 0.9 128 chr3L 9260538 intron GluRIB + chr3L 9260602 intron GluRIB + chr3L 9260666 intron GluRIB + chr3L_5_9260001 chr3L_9260001 RAL-306_125b 1825 chr3L 9270578 9270650 chr3L 9278377 9278400 roo 13 7789 4.0 4.5 4.2 2.5 7822 chr3L 9270578 intron GluRIB + chr3L 9274489 intron GluRIB + chr3L 9278400 exon GluRIB + chr3L_13_9270001 chr3L_9270001 RAL-306_125b 1826 chr3L 9302428 9302472 chr3L 9302563 9302607 7 133 8.5 0.0 4.2 1.3 179 chr3L 9302428 intergenic not near genes chr3L 9302518 intergenic not near genes chr3L 9302607 intergenic not near genes chr3L_7_9300001 chr3L_9300001 RAL-306_125b 1827 chr3L 9307796 9307796 chr3L 22908066 22908066 4 13600270 40.5 31.0 35.8 0.1 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-306_125b 1828 chr3L 9314062 9314079 chr3L 9314202 9314219 5 140 2.0 5.5 3.8 1.0 157 chr3L 9314062 intergenic not near genes chr3L 9314140 intergenic not near genes chr3L 9314219 intergenic not near genes chr3L_5_9310001 chr3L_9310001 RAL-306_125b 1829 chr3L 9320733 9320756 chr3L 9320861 9320885 8 128 5.5 0.0 2.8 2.1 152 chr3L 9320733 intergenic not near genes chr3L 9320809 intergenic not near genes chr3L 9320885 intergenic not near genes chr3L_8_9320001 chr3L_9320001 RAL-306_125b 1830 chr3L 9344199 9344221 chr3L 9344327 9344349 7 128 0.0 19.5 9.8 0.6 150 chr3L 9344199 intron PGRP-LC + chr3L 9344274 intron PGRP-LC + chr3L 9344349 intron PGRP-LC + chr3L_7_9340001 chr3L_9340001 RAL-306_125b 1831 chr3L 9396812 9396839 chr3L 9396928 9396928 4 110 9.0 1.0 5.0 0.7 116 chr3L 9396812 intron CG4080 - chr3L 9396870 intron CG4080 - chr3L 9396928 intron CG4080 - chr3L_4_9395001 chr3L_9395001 RAL-306_125b 1832 chr3L 9442512 9442520 chr3L 9442682 9442690 5 170 7.0 21.0 14.0 0.3 178 chr3L 9442512 intergenic Bet3 -,Nf-YA - chr3L 9442601 intergenic Bet3 -,Nf-YA - chr3L 9442690 intergenic Bet3 -,Nf-YA - chr3L_5_9440001 chr3L_9440001 RAL-306_125b 1833 chr3L 9443495 9443531 chr3L 9445325 9445372 S-element 11 1838 6.5 13.5 10.0 1.0 1877 chr3L 9443495 intron CG33926 + chr3L 9444434 intron CG33926 + chr3L 9445372 intron CG33926 + chr3L_11_9440001 chr3L_9440001 RAL-306_125b 1834 chr3L 9492351 9492383 chr3L 9492482 9492514 5 129 9.5 0.5 5.0 0.8 163 chr3L 9492351 intergenic CG32037 - chr3L 9492432 intergenic CG32037 - chr3L 9492514 intergenic CG32037 - chr3L_5_9490001 chr3L_9490001 RAL-306_125b 1835 chr3L 9501658 9501723 chr3L 9502194 9502259 roo 27 536 9.5 9.0 9.2 2.6 601 chr3L 9501658 intron path - chr3L 9501958 intron path - chr3L 9502259 intron path - chr3L_27_9500001 chr3L_9500001 RAL-306_125b 1836 chr3L 9510864 9510958 chr3L 9511007 9511086 16 137 1.0 3.0 2.0 5.3 222 chr3L 9510864 intron RpS9 - chr3L 9510975 intron RpS9 - chr3L 9511086 exon RpS9 - chr3L_16_9510001 chr3L_9510001 RAL-306_125b 1837 chr3L 9513719 9513761 chr3L 9513855 9513889 18 136 5.5 2.0 3.8 3.8 170 chr3L 9513719 intergenic CG33702 -,CG33700 - chr3L 9513804 intergenic CG33700 -,CG33702 - chr3L 9513889 intergenic CG33700 -,CG33702 - chr3L_18_9510001 chr3L_9510001 RAL-306_125b 1838 chr3L 9533741 9533780 chr3L 9541316 9541379 412 8 7592 7.0 4.5 5.8 1.2 7638 chr3L 9533741 intergenic not near genes chr3L 9537560 intergenic not near genes chr3L 9541379 intergenic not near genes chr3L_8_9535001 chr3L_9535001 RAL-306_125b 1839 chr3L 9559362 9559398 chr3L 9559538 9559567 16 177 6.5 8.5 7.5 1.9 205 chr3L 9559362 intron CG42673 + chr3L 9559464 intron CG42673 + chr3L 9559567 intron CG42673 + chr3L_16_9555001 chr3L_9555001 RAL-306_125b 1840 chr3L 9559401 9559411 chr3L 9559537 9559591 11 175 4.0 8.5 6.2 1.5 190 chr3L 9559401 intron CG42673 + chr3L 9559496 intron CG42673 + chr3L 9559591 intron CG42673 + chr3L_11_9555001 chr3L_9555001 RAL-306_125b 1841 chr3L 9561311 9561363 chr3L 9561434 9561491 12 128 4.0 5.0 4.5 2.2 180 chr3L 9561311 intron CG42673 + chr3L 9561401 intron CG42673 + chr3L 9561491 intron CG42673 + chr3L_12_9560001 chr3L_9560001 RAL-306_125b 1842 chr3L 9571859 9571913 chr3L 9572257 9572305 jockey 25 396 9.5 9.5 9.5 2.4 446 chr3L 9571859 intron CG42673 + chr3L 9572082 intron CG42673 + chr3L 9572305 intron CG42673 + chr3L_25_9570001 chr3L_9570001 RAL-306_125b 1843 chr3L 9571914 9571927 chr3L 9572247 9572325 jockey 4 382 7.5 8.0 7.8 0.5 411 chr3L 9571914 intron CG42673 + chr3L 9572120 intron CG42673 + chr3L 9572325 intron CG42673 + chr3L_4_9570001 chr3L_9570001 RAL-306_125b 1844 chr3L 9575882 9575937 chr3L 9581009 9581065 jockey 19 5127 3.5 10.0 6.8 2.4 5183 chr3L 9575882 intron CG42673 + chr3L 9578474 intron CG42673 + chr3L 9581065 intron CG42673 + chr3L_19_9575001 chr3L_9575001 RAL-306_125b 1845 chr3L 9629689 9629763 chr3L 9629815 9629889 18 126 3.0 9.0 6.0 2.6 200 chr3L 9629689 intron CG8336 + chr3L 9629789 intron CG8336 + chr3L 9629889 intron CG8336 + chr3L_18_9625001 chr3L_9625001 RAL-306_125b 1846 chr3L 9715556 9715598 chr3L 9715682 9715724 18 125 13.5 4.0 8.8 1.8 168 chr3L 9715556 intron vsg + chr3L 9715640 intron vsg + chr3L 9715724 intron vsg + chr3L_18_9715001 chr3L_9715001 RAL-306_125b 1847 chr3L 9758662 9758748 chr3L 9758800 9758862 25 133 4.0 1.0 2.5 7.1 200 chr3L 9758662 intron CG42268 - chr3L 9758762 intron CG42268 - chr3L 9758862 intron CG42268 - chr3L_25_9755001 chr3L_9755001 RAL-306_125b 1848 chr3L 9775316 9775397 chr3L 9775725 9775752 18 403 2.5 6.0 4.2 3.5 436 chr3L 9775316 intron CG8177 + chr3L 9775534 intron CG8177 + chr3L 9775752 intron CG8177 + chr3L_18_9775001 chr3L_9775001 RAL-306_125b 1849 chr3L 9824103 9824166 chr3L 9824232 9824303 19 131 7.5 0.0 3.8 4.0 200 chr3L 9824103 intron CG43897 + chr3L 9824203 intron CG43897 + chr3L 9824303 intron CG43897 + chr3L_19_9820001 chr3L_9820001 RAL-306_125b 1850 chr3L 9918832 9918911 chr3L 9918977 9919056 23 143 10.0 9.5 9.8 2.1 224 chr3L 9918832 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919056 intron CG34356 + chr3L_23_9915001 chr3L_9915001 RAL-306_125b 1851 chr3L 9929630 9929700 chr3L 9938454 9938489 roo 23 8825 10.5 8.0 9.2 2.3 8859 chr3L 9929630 intron CG34356 + chr3L 9934060 intron CG34356 + chr3L 9938489 intron CG34356 + chr3L_23_9930001 chr3L_9930001 RAL-306_125b 1852 chr3L 10002896 10002923 chr3L 10003041 10003068 11 143 6.0 0.0 3.0 2.8 172 chr3L 10002896 intron dpr6 + chr3L 10002982 intron dpr6 + chr3L 10003068 intron dpr6 + chr3L_11_10000001 chr3L_10000001 RAL-306_125b 1853 chr3L 10027908 10027979 chr3L 10028053 10028080 12 127 9.5 6.0 7.8 1.4 172 chr3L 10027908 intron dpr6 + chr3L 10027994 intron dpr6 + chr3L 10028080 intron dpr6 + chr3L_12_10025001 chr3L_10025001 RAL-306_125b 1854 chr3L 10032501 10032568 chr3L 10032635 10032705 9 136 0.0 4.5 2.2 2.8 204 chr3L 10032501 intron dpr6 + chr3L 10032603 intron dpr6 + chr3L 10032705 intron dpr6 + chr3L_9_10030001 chr3L_10030001 RAL-306_125b 1855 chr3L 10035170 10035240 chr3L 10035307 10035362 19 134 7.5 2.0 4.8 3.3 192 chr3L 10035170 intron dpr6 + chr3L 10035266 intron dpr6 + chr3L 10035362 intron dpr6 + chr3L_19_10035001 chr3L_10035001 RAL-306_125b 1856 chr3L 10049508 10049565 chr3L 10049638 10049695 17 130 8.5 7.5 8.0 1.9 187 chr3L 10049508 intron dpr6 + chr3L 10049602 intron dpr6 + chr3L 10049695 intron dpr6 + chr3L_17_10045001 chr3L_10045001 RAL-306_125b 1857 chr3L 10060078 10060117 chr3L 10067707 10067746 17.6 13 7628 12.0 7.5 9.8 1.2 7668 chr3L 10060078 intron dpr6 + chr3L 10063912 intron dpr6 + chr3L 10067746 intron dpr6 + chr3L_13_10060001 chr3L_10060001 RAL-306_125b 1858 chr3L 10085419 10085466 chr3L 10085577 10085624 21 158 6.0 8.5 7.2 2.6 205 chr3L 10085419 intron dpr6 + chr3L 10085522 intron dpr6 + chr3L 10085624 intron dpr6 + chr3L_21_10085001 chr3L_10085001 RAL-306_125b 1859 chr3L 10099102 10099179 chr3L 10099269 10099342 24 164 4.5 6.0 5.2 3.9 240 chr3L 10099102 intron dpr6 + chr3L 10099222 intron dpr6 + chr3L 10099342 intron dpr6 + chr3L_24_10095001 chr3L_10095001 RAL-306_125b 1860 chr3L 10181904 10181919 chr3L 10182158 10182173 9 254 4.0 16.5 10.2 0.8 269 chr3L 10181904 intron dpr10 - chr3L 10182038 intron dpr10 - chr3L 10182173 intron dpr10 - chr3L_9_10180001 chr3L_10180001 RAL-306_125b 1861 chr3L 10189468 10189493 chr3L 10189703 10189727 8 235 10.5 13.0 11.8 0.6 259 chr3L 10189468 intergenic not near genes chr3L 10189598 intergenic not near genes chr3L 10189727 intergenic not near genes chr3L_8_10185001 chr3L_10185001 RAL-306_125b 1862 chr3L 10282589 10282656 chr3L 10282775 10282817 13 181 3.5 6.5 5.0 2.2 228 chr3L 10282589 intergenic not near genes chr3L 10282703 intergenic not near genes chr3L 10282817 intergenic not near genes chr3L_13_10280001 chr3L_10280001 RAL-306_125b 1863 chr3L 10298633 10298694 chr3L 10298764 10298831 17 136 0.0 2.5 1.2 7.7 198 chr3L 10298633 intergenic not near genes chr3L 10298732 intergenic not near genes chr3L 10298831 intergenic not near genes chr3L_17_10295001 chr3L_10295001 RAL-306_125b 1864 chr3L 10300004 10300073 chr3L 10300146 10300215 13 142 2.0 7.5 4.8 2.2 211 chr3L 10300004 intergenic not near genes chr3L 10300110 intergenic not near genes chr3L 10300215 intergenic not near genes chr3L_13_10300001 chr3L_10300001 RAL-306_125b 1865 chr3L 8642888 8642891 chr3L 10303548 10303551 4 1660660 5.5 19.0 12.2 0.3 1660663 chr3L 8642888 intron Cpr66D + chr3L 9473220 exon CG44838 + chr3L 10303551 intergenic not near genes chr3L_4_9470001 chr3L_9470001 RAL-306_125b 1866 chr3L 10308708 10308763 chr3L 10308815 10308890 11 121 2.5 9.5 6.0 1.6 182 chr3L 10308708 intergenic not near genes chr3L 10308799 intergenic not near genes chr3L 10308890 intergenic not near genes chr3L_11_10305001 chr3L_10305001 RAL-306_125b 1867 chr3L 10328066 10328128 chr3L 10328228 10328290 23 161 7.5 6.5 7.0 2.9 224 chr3L 10328066 intergenic not near genes chr3L 10328178 intergenic not near genes chr3L 10328290 intergenic not near genes chr3L_23_10325001 chr3L_10325001 RAL-306_125b 1868 chr3L 10373609 10373621 chr3L 10373740 10373752 5 131 3.5 8.5 6.0 0.7 143 chr3L 10373609 intergenic not near genes chr3L 10373680 intergenic not near genes chr3L 10373752 intergenic not near genes chr3L_5_10370001 chr3L_10370001 RAL-306_125b 1869 chr3L 10376082 10376135 chr3L 10376208 10376261 26 126 9.0 9.0 9.0 2.6 179 chr3L 10376082 intergenic not near genes chr3L 10376172 intergenic not near genes chr3L 10376261 intergenic not near genes chr3L_26_10375001 chr3L_10375001 RAL-306_125b 1870 chr3L 10414890 10414969 chr3L 10417310 10417384 Doc 22 2420 7.0 5.5 6.2 3.1 2494 chr3L 10414890 intergenic CG12362 + chr3L 10416137 intergenic not near genes chr3L 10417384 intergenic not near genes chr3L_22_10415001 chr3L_10415001 RAL-306_125b 1871 chr3L 10417527 10417597 chr3L 10417654 10417686 18 119 6.5 6.5 6.5 2.4 159 chr3L 10417527 intergenic not near genes chr3L 10417606 intergenic not near genes chr3L 10417686 intergenic not near genes chr3L_18_10415001 chr3L_10415001 RAL-306_125b 1872 chr3L 10458666 10458725 chr3L 10458768 10458836 8 112 7.0 4.0 5.5 1.2 170 chr3L 10458666 intergenic Gem3 - chr3L 10458751 intergenic Gem3 - chr3L 10458836 intergenic Gem3 - chr3L_8_10455001 chr3L_10455001 RAL-306_125b 1873 chr3L 10469886 10469933 chr3L 10470012 10470059 18 126 9.5 1.0 5.2 2.9 173 chr3L 10469886 intergenic not near genes chr3L 10469972 intergenic not near genes chr3L 10470059 intergenic not near genes chr3L_18_10465001 chr3L_10465001 RAL-306_125b 1874 chr3L 10501998 10502035 chr3L 10502144 10502181 12 146 10.0 5.0 7.5 1.4 183 chr3L 10501998 intron A2bp1 + chr3L 10502090 intron A2bp1 + chr3L 10502181 intron A2bp1 + chr3L_12_10500001 chr3L_10500001 RAL-306_125b 1875 chr3L 10504303 10504324 chr3L 10504432 10504452 6 127 15.0 9.0 12.0 0.5 149 chr3L 10504303 intron A2bp1 + chr3L 10504378 intron A2bp1 + chr3L 10504452 intron A2bp1 + chr3L_6_10500001 chr3L_10500001 RAL-306_125b 1876 chr3L 10504325 10504343 chr3L 10504426 10504472 7 122 10.5 9.0 9.8 0.6 147 chr3L 10504325 intron A2bp1 + chr3L 10504398 intron A2bp1 + chr3L 10504472 intron A2bp1 + chr3L_7_10500001 chr3L_10500001 RAL-306_125b 1877 chr3L 10509439 10509488 chr3L 10509618 10509622 13 173 10.5 2.0 6.2 1.8 183 chr3L 10509439 intron A2bp1 + chr3L 10509530 intron A2bp1 + chr3L 10509622 intron A2bp1 + chr3L_13_10505001 chr3L_10505001 RAL-306_125b 1878 chr3L 10553460 10553519 chr3L 10553707 10553765 14 244 4.0 8.5 6.2 1.9 305 chr3L 10553460 intron A2bp1 + chr3L 10553612 intron A2bp1 + chr3L 10553765 intron A2bp1 + chr3L_14_10550001 chr3L_10550001 RAL-306_125b 1879 chr3L 10584232 10584301 chr3L 10584369 10584438 27 137 7.0 4.5 5.8 4.0 206 chr3L 10584232 intron A2bp1 + chr3L 10584335 intron A2bp1 + chr3L 10584438 intron A2bp1 + chr3L_27_10580001 chr3L_10580001 RAL-306_125b 1880 chr3L 10600412 10600447 chr3L 10600544 10600579 9 132 10.5 1.5 6.0 1.3 167 chr3L 10600412 intergenic not near genes chr3L 10600496 intergenic not near genes chr3L 10600579 intergenic not near genes chr3L_9_10600001 chr3L_10600001 RAL-306_125b 1881 chr3L 10600448 10600470 chr3L 10600540 10600602 8 126 4.5 1.0 2.8 2.1 154 chr3L 10600448 intergenic not near genes chr3L 10600525 intergenic not near genes chr3L 10600602 intergenic not near genes chr3L_8_10600001 chr3L_10600001 RAL-306_125b 1882 chr3L 10603676 10603731 chr3L 10603916 10603968 16 237 0.0 4.5 2.2 5.0 292 chr3L 10603676 intergenic not near genes chr3L 10603822 intergenic not near genes chr3L 10603968 intergenic not near genes chr3L_16_10600001 chr3L_10600001 RAL-306_125b 1883 chr3L 10621831 10621878 chr3L 10621957 10622009 17 132 3.5 10.5 7.0 2.1 178 chr3L 10621831 intergenic not near genes chr3L 10621920 intergenic not near genes chr3L 10622009 intergenic not near genes chr3L_17_10620001 chr3L_10620001 RAL-306_125b 1884 chr3L 10627389 10627417 chr3L 10627522 10627550 5 133 0.0 1.5 0.8 2.8 161 chr3L 10627389 3` UTR CG34238 + chr3L 10627470 intergenic CG34238 +,CG14151 - chr3L 10627550 intergenic CG34238 +,CG14151 - chr3L_5_10625001 chr3L_10625001 RAL-306_125b 1885 chr3L 10706551 10706565 chr3L 10706733 10706747 7 182 0.0 9.5 4.8 1.2 196 chr3L 10706551 intergenic not near genes chr3L 10706649 intergenic not near genes chr3L 10706747 intergenic not near genes chr3L_7_10705001 chr3L_10705001 RAL-306_125b 1886 chr3L 10714647 10714713 chr3L 10714777 10714851 4 132 0.0 1.5 0.8 2.2 204 chr3L 10714647 intergenic not near genes chr3L 10714749 intergenic not near genes chr3L 10714851 intergenic not near genes chr3L_4_10710001 chr3L_10710001 RAL-306_125b 1887 chr3L 10721958 10721985 chr3L 10722090 10722112 4 131 6.5 0.0 3.2 1.0 154 chr3L 10721958 intergenic not near genes chr3L 10722035 intergenic not near genes chr3L 10722112 intergenic not near genes chr3L_4_10720001 chr3L_10720001 RAL-306_125b 1888 chr3L 10735788 10735829 chr3L 10735928 10735968 15 139 8.0 9.5 8.8 1.5 180 chr3L 10735788 intergenic not near genes chr3L 10735878 intergenic not near genes chr3L 10735968 intergenic not near genes chr3L_15_10735001 chr3L_10735001 RAL-306_125b 1889 chr3L 10739760 10739775 chr3L 10739894 10739909 8 134 9.5 0.0 4.8 1.4 149 chr3L 10739760 intergenic not near genes chr3L 10739834 intergenic not near genes chr3L 10739909 intergenic not near genes chr3L_8_10735001 chr3L_10735001 RAL-306_125b 1890 chr3L 10752296 10752353 chr3L 10752407 10752480 19 123 6.0 8.5 7.2 2.3 184 chr3L 10752296 intergenic not near genes chr3L 10752388 intergenic not near genes chr3L 10752480 intergenic not near genes chr3L_19_10750001 chr3L_10750001 RAL-306_125b 1891 chr3L 10762791 10762807 chr3L 10762925 10762941 5 134 13.5 4.0 8.8 0.5 150 chr3L 10762791 intergenic not near genes chr3L 10762866 intergenic not near genes chr3L 10762941 intergenic not near genes chr3L_5_10760001 chr3L_10760001 RAL-306_125b 1892 chr3L 10762809 10762848 chr3L 10762923 10762982 8 126 4.5 4.0 4.2 1.5 173 chr3L 10762809 intergenic not near genes chr3L 10762896 intergenic not near genes chr3L 10762982 intergenic not near genes chr3L_8_10760001 chr3L_10760001 RAL-306_125b 1893 chr3L 10820376 10820520 chr3L 10820518 10820719 9 202 1.0 1.0 1.0 4.5 343 chr3L 10820376 intergenic not near genes chr3L 10820548 intergenic not near genes chr3L 10820719 intergenic not near genes chr3L_9_10820001 chr3L_10820001 RAL-306_125b 1894 chr3L 10823559 10823598 chr3L 10824365 10824404 10 810 49.0 45.0 47.0 0.2 845 chr3L 10823559 intergenic not near genes chr3L 10823982 intergenic not near genes chr3L 10824404 intergenic not near genes chr3L_10_10820001 chr3L_10820001 RAL-306_125b 1895 chr3L 10823599 10823616 chr3L 10824405 10824422 8 807 54.5 37.0 45.8 0.2 823 chr3L 10823599 intergenic not near genes chr3L 10824010 intergenic not near genes chr3L 10824422 intergenic not near genes chr3L_8_10820001 chr3L_10820001 RAL-306_125b 1896 chr3L 10887364 10887374 chr3L 10887493 10887503 5 129 0.5 17.0 8.8 0.5 139 chr3L 10887364 intergenic not near genes chr3L 10887434 intergenic not near genes chr3L 10887503 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-306_125b 1897 chr3L 10907956 10907963 chr3L 10908082 10908089 5 126 10.0 0.0 5.0 0.8 133 chr3L 10907956 intergenic not near genes chr3L 10908022 intergenic not near genes chr3L 10908089 intergenic not near genes chr3L_5_10905001 chr3L_10905001 RAL-306_125b 1898 chr3L 10910441 10910514 chr3L 10910735 10910808 33 292 12.5 11.0 11.8 2.6 367 chr3L 10910441 intergenic not near genes chr3L 10910624 intergenic not near genes chr3L 10910808 intergenic not near genes chr3L_33_10910001 chr3L_10910001 RAL-306_125b 1899 chr3L 10912096 10912165 chr3L 10912242 10912316 15 142 11.0 3.0 7.0 1.9 220 chr3L 10912096 intergenic not near genes chr3L 10912206 intergenic not near genes chr3L 10912316 intergenic not near genes chr3L_15_10910001 chr3L_10910001 RAL-306_125b 1900 chr3L 10937799 10937876 chr3L 10937926 10938003 26 126 10.0 6.0 8.0 2.9 204 chr3L 10937799 intergenic not near genes chr3L 10937901 intergenic not near genes chr3L 10938003 intergenic not near genes chr3L_26_10935001 chr3L_10935001 RAL-306_125b 1901 chr3L 10942005 10942072 chr3L 10942140 10942205 4 122 6.5 4.5 5.5 0.6 200 chr3L 10942005 intergenic not near genes chr3L 10942105 intergenic not near genes chr3L 10942205 intergenic not near genes chr3L_4_10940001 chr3L_10940001 RAL-306_125b 1902 chr3L 10947462 10947476 chr3L 10947588 10947602 7 125 0.0 2.0 1.0 3.5 140 chr3L 10947462 intergenic not near genes chr3L 10947532 intergenic not near genes chr3L 10947602 intergenic not near genes chr3L_7_10945001 chr3L_10945001 RAL-306_125b 1903 chr3L 10956368 10956388 chr3L 10956513 10956533 6 144 4.0 6.5 5.2 1.0 165 chr3L 10956368 intergenic not near genes chr3L 10956450 intergenic not near genes chr3L 10956533 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-306_125b 1904 chr3L 10958157 10958232 chr3L 10958289 10958334 16 128 3.5 0.0 1.8 5.7 177 chr3L 10958157 intergenic not near genes chr3L 10958246 intergenic not near genes chr3L 10958334 intergenic not near genes chr3L_16_10955001 chr3L_10955001 RAL-306_125b 1905 chr3L 10993077 10993139 chr3L 10993203 10993276 15 124 4.5 4.5 4.5 2.7 199 chr3L 10993077 intron klu - chr3L 10993176 intron klu - chr3L 10993276 intron klu - chr3L_15_10990001 chr3L_10990001 RAL-306_125b 1906 chr3L 11053617 11053679 chr3L 11053752 11053808 13 134 0.0 11.0 5.5 2.0 191 chr3L 11053617 intergenic CG7888 + chr3L 11053712 intergenic CG7888 + chr3L 11053808 intergenic CG7888 + chr3L_13_11050001 chr3L_11050001 RAL-306_125b 1907 chr3L 11087011 11087090 chr3L 11088849 11088868 S-element 22 1833 3.5 7.5 5.5 3.4 1857 chr3L 11087011 intron JIL-1 - chr3L 11087940 intron JIL-1 - chr3L 11088868 intron JIL-1 - chr3L_22_11085001 chr3L_11085001 RAL-306_125b 1908 chr3L 11103207 11103257 chr3L 11108561 11108612 X-element 8 5353 5.5 5.0 5.2 1.3 5405 chr3L 11103207 intergenic Elo68alpha -,CG32071 - chr3L 11105910 intergenic not near genes chr3L 11108612 exon CG12522 + chr3L_8_11105001 chr3L_11105001 RAL-306_125b 1909 chr3L 11130691 11130760 chr3L 11130817 11130886 27 124 7.0 4.5 5.8 4.0 195 chr3L 11130691 intron CG42575 + chr3L 11130788 intron CG42575 + chr3L 11130886 intron,exon CG42575 +,nol + chr3L_27_11130001 chr3L_11130001 RAL-306_125b 1910 chr3L 11134650 11134708 chr3L 11134777 11134835 12 127 11.5 7.5 9.5 1.1 185 chr3L 11134650 3` UTR CG42575 + chr3L 11134742 intergenic CG42575 +,CG14143 + chr3L 11134835 intergenic CG14143 +,CG42575 + chr3L_12_11130001 chr3L_11130001 RAL-306_125b 1911 chr3L 11157694 11157761 chr3L 11157863 11157931 16 168 9.0 4.0 6.5 2.1 237 chr3L 11157694 intron CG32082 + chr3L 11157812 intron CG32082 + chr3L 11157931 intron CG32082 + chr3L_16_11155001 chr3L_11155001 RAL-306_125b 1912 chr3L 11186224 11186298 chr3L 11186353 11186390 15 123 7.0 8.5 7.8 1.7 166 chr3L 11186224 intron GlcAT-P - chr3L 11186307 intron GlcAT-P - chr3L 11186390 intron GlcAT-P - chr3L_15_11185001 chr3L_11185001 RAL-306_125b 1913 chr3L 11187699 11187729 chr3L 11187830 11187860 15 131 0.0 14.0 7.0 1.9 161 chr3L 11187699 intron GlcAT-P - chr3L 11187780 intron GlcAT-P - chr3L 11187860 intron GlcAT-P - chr3L_15_11185001 chr3L_11185001 RAL-306_125b 1914 chr3L 11200917 11200941 chr3L 11201043 11201067 4 126 0.0 6.0 3.0 1.0 150 chr3L 11200917 intron Plod - chr3L 11200992 intron Plod - chr3L 11201067 intron Plod - chr3L_4_11200001 chr3L_11200001 RAL-306_125b 1915 chr3L 11224519 11224576 chr3L 11224691 11224747 13 170 0.0 8.0 4.0 2.6 228 chr3L 11224519 intron CG42671 + chr3L 11224633 intron CG42671 + chr3L 11224747 intron CG42671 + chr3L_13_11220001 chr3L_11220001 RAL-306_125b 1916 chr3L 11264427 11264494 chr3L 11271429 11271460 17.6 21 6997 8.0 11.5 9.8 1.9 7033 chr3L 11264427 intergenic not near genes chr3L 11267944 intergenic not near genes chr3L 11271460 intergenic not near genes chr3L_21_11265001 chr3L_11265001 RAL-306_125b 1917 chr3L 11290578 11290648 chr3L 11290951 11291021 20 372 10.5 12.5 11.5 1.6 443 chr3L 11290578 intron CG6175 - chr3L 11290800 intron CG6175 - chr3L 11291021 intron CG6175 - chr3L_20_11290001 chr3L_11290001 RAL-306_125b 1918 chr3L 11301638 11301704 chr3L 11301811 11301873 33 171 6.0 7.0 6.5 4.4 235 chr3L 11301638 intergenic not near genes chr3L 11301756 intergenic not near genes chr3L 11301873 intergenic not near genes chr3L_33_11300001 chr3L_11300001 RAL-306_125b 1919 chr3L 11303000 11303055 chr3L 11303136 11303191 7 134 2.0 0.0 1.0 3.5 191 chr3L 11303000 intergenic not near genes chr3L 11303096 intergenic not near genes chr3L 11303191 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-306_125b 1920 chr3L 11304788 11304806 chr3L 11304935 11304953 7 147 16.5 2.0 9.2 0.7 165 chr3L 11304788 intergenic not near genes chr3L 11304870 intergenic not near genes chr3L 11304953 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-306_125b 1921 chr3L 11314720 11314773 chr3L 11315987 11316040 12 1266 6.5 11.0 8.8 1.2 1320 chr3L 11314720 intergenic not near genes chr3L 11315380 5` UTR CR44361 + chr3L 11316040 5` UTR CR44361 + chr3L_12_11315001 chr3L_11315001 RAL-306_125b 1922 chr3L 11329662 11329719 chr3L 11332903 11332974 jockey 20 3248 5.5 11.5 8.5 2.1 3312 chr3L 11329662 intergenic not near genes chr3L 11331318 intergenic not near genes chr3L 11332974 intergenic not near genes chr3L_20_11330001 chr3L_11330001 RAL-306_125b 1923 chr3L 11397542 11397589 chr3L 11397675 11397739 7 135 2.5 5.0 3.8 1.5 197 chr3L 11397542 exon CG44362 + chr3L 11397640 exon CG44362 + chr3L 11397739 exon CG44362 + chr3L_7_11395001 chr3L_11395001 RAL-306_125b 1924 chr3L 11441349 11441372 chr3L 11441478 11441501 5 129 0.0 13.5 6.8 0.6 152 chr3L 11441349 intergenic not near genes chr3L 11441425 intergenic not near genes chr3L 11441501 intergenic not near genes chr3L_5_11440001 chr3L_11440001 RAL-306_125b 1925 chr3L 11456859 11456915 chr3L 11457007 11457052 10 147 8.5 2.0 5.2 1.6 193 chr3L 11456859 intergenic CG12289 - chr3L 11456956 intergenic CG12289 - chr3L 11457052 intergenic CG12289 - chr3L_10_11455001 chr3L_11455001 RAL-306_125b 1926 chr3L 11493107 11493181 chr3L 11493239 11493313 20 132 4.0 4.5 4.2 3.8 206 chr3L 11493107 intron chrb + chr3L 11493210 intron chrb + chr3L 11493313 intron chrb + chr3L_20_11490001 chr3L_11490001 RAL-306_125b 1927 chr3L 11548803 11548874 chr3L 11548940 11549011 17 136 9.5 7.5 8.5 1.8 208 chr3L 11548803 intron Mob2 - chr3L 11548907 intron Mob2 - chr3L 11549011 intron Mob2 - chr3L_17_11545001 chr3L_11545001 RAL-306_125b 1928 chr3L 11579521 11579584 chr3L 11579677 11579729 32 152 6.5 0.5 3.5 7.1 208 chr3L 11579521 intergenic CG43390 - chr3L 11579625 intergenic CG43390 - chr3L 11579729 intergenic CG43390 - chr3L_32_11575001 chr3L_11575001 RAL-306_125b 1929 chr3L 11656211 11656261 chr3L 11656344 11656394 7 133 5.5 0.0 2.8 1.8 183 chr3L 11656211 intron CG32085 - chr3L 11656302 intron CG32085 - chr3L 11656394 intron CG32085 - chr3L_7_11655001 chr3L_11655001 RAL-306_125b 1930 chr3L 11678048 11678120 chr3L 11678185 11678257 22 136 4.0 11.0 7.5 2.6 209 chr3L 11678048 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678257 intron CG32085 - chr3L_22_11675001 chr3L_11675001 RAL-306_125b 1931 chr3L 11679030 11679031 chr3L 17958265 17958266 4 6279235 13.5 33.0 23.2 0.2 6279236 chr3L 11679030 intron CG32085 - chr3L 14818648 intron CG17839 + chr3L 17958266 intron Eip75B - chr3L_4_14815001 chr3L_14815001 RAL-306_125b 1932 chr3L 11711715 11711726 chr3L 11711842 11711864 4 136 8.0 1.5 4.8 0.7 149 chr3L 11711715 intergenic crim - chr3L 11711790 intergenic crim -,CG14132 - chr3L 11711864 intergenic CG14132 -,crim - chr3L_4_11710001 chr3L_11710001 RAL-306_125b 1933 chr3L 11723045 11723105 chr3L 11727885 11727950 Doc 23 4844 10.5 10.0 10.2 2.1 4905 chr3L 11723045 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727950 3` UTR Bmcp + chr3L_23_11725001 chr3L_11725001 RAL-306_125b 1934 chr3L 11743976 11743982 chr3L 11744134 11744140 4 158 14.5 1.5 8.0 0.4 164 chr3L 11743976 exon CG6024 - chr3L 11744058 intron CG6024 - chr3L 11744140 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-306_125b 1935 chr3L 11743985 11744046 chr3L 11744128 11744204 12 151 3.5 1.5 2.5 3.4 219 chr3L 11743985 exon CG6024 - chr3L 11744094 intron CG6024 - chr3L 11744204 intron CG6024 - chr3L_12_11740001 chr3L_11740001 RAL-306_125b 1936 chr3L 11810535 11810555 chr3L 11810663 11810676 5 126 6.5 19.0 12.8 0.4 141 chr3L 11810535 intron CG42255 - chr3L 11810606 intron CG42255 - chr3L 11810676 exon CG42255 - chr3L_5_11810001 chr3L_11810001 RAL-306_125b 1937 chr3L 11816757 11816808 chr3L 11816908 11816959 14 148 5.0 11.0 8.0 1.6 202 chr3L 11816757 3` UTR CG5946 - chr3L 11816858 3` UTR CG5946 - chr3L 11816959 3` UTR CG5946 - chr3L_14_11815001 chr3L_11815001 RAL-306_125b 1938 chr3L 11864516 11864527 chr3L 11865860 11865872 pogo 5 1344 18.5 11.0 14.8 0.3 1356 chr3L 11864516 intron CG44837 - chr3L 11865194 intron CG44837 - chr3L 11865872 intron CG44837 - chr3L_5_11865001 chr3L_11865001 RAL-306_125b 1939 chr3L 11864533 11864567 chr3L 11865855 11865912 pogo 13 1341 10.0 9.0 9.5 1.2 1379 chr3L 11864533 intron CG44837 - chr3L 11865222 intron CG44837 - chr3L 11865912 intron CG44837 - chr3L_13_11865001 chr3L_11865001 RAL-306_125b 1940 chr3L 11872618 11872632 chr3L 11873010 11873023 10 391 19.0 7.5 13.2 0.7 405 chr3L 11872618 intron CG44837 - chr3L 11872820 intron CG44837 - chr3L 11873023 intron CG44837 - chr3L_10_11870001 chr3L_11870001 RAL-306_125b 1941 chr3L 11872633 11872690 chr3L 11873005 11873067 13 385 6.0 7.5 6.8 1.7 434 chr3L 11872633 intron CG44837 - chr3L 11872850 intron CG44837 - chr3L 11873067 intron CG44837 - chr3L_13_11870001 chr3L_11870001 RAL-306_125b 1942 chr3L 11887208 11887289 chr3L 11887355 11887436 10 148 7.0 0.0 3.5 2.2 228 chr3L 11887208 intron CG44837 - chr3L 11887322 intron,3` UTR CG44837 -,CG5897 - chr3L 11887436 intron,3` UTR CG44837 -,CG5897 - chr3L_10_11885001 chr3L_11885001 RAL-306_125b 1943 chr3L 11897111 11897178 chr3L 11897395 11897454 14 282 5.0 4.5 4.8 2.4 343 chr3L 11897111 intron CG44837 - chr3L 11897282 intron CG44837 - chr3L 11897454 intron CG44837 - chr3L_14_11895001 chr3L_11895001 RAL-306_125b 1944 chr3L 12013861 12013937 chr3L 12014002 12014078 11 141 4.5 4.5 4.5 2.0 217 chr3L 12013861 intron rols - chr3L 12013970 intron rols - chr3L 12014078 intron rols - chr3L_11_12010001 chr3L_12010001 RAL-306_125b 1945 chr3L 12052665 12052730 chr3L 12052804 12052869 21 138 7.0 8.5 7.8 2.4 204 chr3L 12052665 intron rols - chr3L 12052767 intron rols - chr3L 12052869 intron rols - chr3L_21_12050001 chr3L_12050001 RAL-306_125b 1946 chr3L 12075380 12075460 chr3L 12075519 12075574 20 132 7.5 0.0 3.8 4.2 194 chr3L 12075380 intron Sema-5c - chr3L 12075477 intron Sema-5c - chr3L 12075574 intron Sema-5c - chr3L_20_12075001 chr3L_12075001 RAL-306_125b 1947 chr3L 12076366 12076405 chr3L 12076506 12076539 5 138 9.0 1.0 5.0 0.8 173 chr3L 12076366 intron Sema-5c - chr3L 12076452 intron Sema-5c - chr3L 12076539 intron Sema-5c - chr3L_5_12075001 chr3L_12075001 RAL-306_125b 1948 chr3L 12089047 12089110 chr3L 12089177 12089240 22 127 9.0 7.0 8.0 2.4 193 chr3L 12089047 exon CG17154 + chr3L 12089144 3` UTR CG17154 + chr3L 12089240 intergenic CG17154 + chr3L_22_12085001 chr3L_12085001 RAL-306_125b 1949 chr3L 12114036 12114082 chr3L 12114172 12114218 20 133 11.5 6.0 8.8 2.0 182 chr3L 12114036 intergenic not near genes chr3L 12114127 intergenic not near genes chr3L 12114218 intergenic not near genes chr3L_20_12110001 chr3L_12110001 RAL-306_125b 1950 chr3L 12220266 12220274 chr3L 12220399 12220407 4 133 4.0 5.5 4.8 0.7 141 chr3L 12220266 5` UTR app - chr3L 12220336 5` UTR app - chr3L 12220407 5` UTR app - chr3L_4_12220001 chr3L_12220001 RAL-306_125b 1951 chr3L 12220282 12220309 chr3L 12220396 12220437 4 111 2.0 4.5 3.2 1.0 155 chr3L 12220282 5` UTR app - chr3L 12220360 5` UTR app - chr3L 12220437 5` UTR app - chr3L_4_12220001 chr3L_12220001 RAL-306_125b 1952 chr3L 12290202 12290288 chr3L 12290342 12290432 7 142 0.0 0.0 0.0 7.0 230 chr3L 12290202 intergenic CR45658 - chr3L 12290317 intergenic CR45658 - chr3L 12290432 intergenic CR45658 - chr3L_7_12290001 chr3L_12290001 RAL-306_125b 1953 chr3L 12297439 12297470 chr3L 12297649 12297680 8 210 2.0 0.0 1.0 4.0 241 chr3L 12297439 intergenic not near genes chr3L 12297560 intergenic not near genes chr3L 12297680 intergenic not near genes chr3L_8_12295001 chr3L_12295001 RAL-306_125b 1954 chr3L 12304045 12304081 chr3L 12304171 12304206 8 121 6.0 4.5 5.2 1.3 161 chr3L 12304045 intergenic not near genes chr3L 12304126 intergenic not near genes chr3L 12304206 intergenic not near genes chr3L_8_12300001 chr3L_12300001 RAL-306_125b 1955 chr3L 12304085 12304116 chr3L 12304166 12304242 12 114 4.0 4.5 4.2 2.3 157 chr3L 12304085 intergenic not near genes chr3L 12304164 intergenic not near genes chr3L 12304242 intergenic not near genes chr3L_12_12300001 chr3L_12300001 RAL-306_125b 1956 chr3L 12335339 12335411 chr3L 12335468 12335508 18 110 5.0 5.5 5.2 2.9 169 chr3L 12335339 exon CG32105 + chr3L 12335424 3` UTR CG32105 + chr3L 12335508 3` UTR CG32105 + chr3L_18_12335001 chr3L_12335001 RAL-306_125b 1957 chr3L 12364136 12364167 chr3L 12364319 12364354 6 187 4.5 7.5 6.0 0.9 218 chr3L 12364136 intergenic not near genes chr3L 12364245 intergenic not near genes chr3L 12364354 intergenic not near genes chr3L_6_12360001 chr3L_12360001 RAL-306_125b 1958 chr3L 12364168 12364176 chr3L 12364316 12364364 4 177 2.5 7.5 5.0 0.7 196 chr3L 12364168 intergenic not near genes chr3L 12364266 intergenic not near genes chr3L 12364364 intergenic not near genes chr3L_4_12360001 chr3L_12360001 RAL-306_125b 1959 chr3L 12369485 12369564 chr3L 12369625 12369703 36 138 2.5 5.5 4.0 7.2 218 chr3L 12369485 intron Ncc69 - chr3L 12369594 intron Ncc69 - chr3L 12369703 intron Ncc69 - chr3L_36_12365001 chr3L_12365001 RAL-306_125b 1960 chr3L 12458486 12458507 chr3L 12458630 12458653 8 146 5.0 17.5 11.2 0.7 167 chr3L 12458486 intergenic not near genes chr3L 12458570 intergenic not near genes chr3L 12458653 intergenic not near genes chr3L_8_12455001 chr3L_12455001 RAL-306_125b 1961 chr3L 12460275 12460341 chr3L 12460402 12460454 10 125 1.5 6.0 3.8 2.1 179 chr3L 12460275 intergenic not near genes chr3L 12460364 intergenic not near genes chr3L 12460454 intergenic not near genes chr3L_10_12460001 chr3L_12460001 RAL-306_125b 1962 chr3L 12485403 12485413 chr3L 12485534 12485544 5 131 1.0 23.0 12.0 0.4 141 chr3L 12485403 intron CG33725 + chr3L 12485474 intron CG33725 + chr3L 12485544 intron CG33725 + chr3L_5_12485001 chr3L_12485001 RAL-306_125b 1963 chr3L 12491705 12491735 chr3L 12491810 12491868 5 127 0.0 7.0 3.5 1.1 163 chr3L 12491705 intergenic CG10657 -,CR45682 + chr3L 12491786 intergenic CG10657 -,CR45682 + chr3L 12491868 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_5_12490001 chr3L_12490001 RAL-306_125b 1964 chr3L 12578005 12578059 chr3L 12578143 12578197 5 138 6.0 0.0 3.0 1.2 192 chr3L 12578005 intergenic not near genes chr3L 12578101 intergenic not near genes chr3L 12578197 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-306_125b 1965 chr3L 12587308 12587384 chr3L 12587441 12587521 11 135 6.0 0.0 3.0 2.8 213 chr3L 12587308 intron ara + chr3L 12587414 intron ara + chr3L 12587521 intron ara + chr3L_11_12585001 chr3L_12585001 RAL-306_125b 1966 chr3L 12610951 12611018 chr3L 12611247 12611314 20 296 0.0 8.5 4.2 3.8 363 chr3L 12610951 intron caup + chr3L 12611132 intron caup + chr3L 12611314 intron caup + chr3L_20_12610001 chr3L_12610001 RAL-306_125b 1967 chr3L 12612532 12612604 chr3L 12612675 12612747 32 142 6.0 8.0 7.0 4.0 215 chr3L 12612532 intron caup + chr3L 12612640 intron caup + chr3L 12612747 intron caup + chr3L_32_12610001 chr3L_12610001 RAL-306_125b 1968 chr3L 12614554 12614599 chr3L 12614742 12614787 15 188 0.0 11.0 5.5 2.3 233 chr3L 12614554 intron caup + chr3L 12614670 intron caup + chr3L 12614787 intron caup + chr3L_15_12610001 chr3L_12610001 RAL-306_125b 1969 chr3L 12626111 12626141 chr3L 12626264 12626300 8 158 6.5 0.0 3.2 1.9 189 chr3L 12626111 intergenic not near genes chr3L 12626206 intergenic not near genes chr3L 12626300 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-306_125b 1970 chr3L 12628957 12628970 chr3L 12629077 12629096 6 125 2.0 6.0 4.0 1.2 139 chr3L 12628957 intron CR32111 + chr3L 12629026 intron CR32111 + chr3L 12629096 intron CR32111 + chr3L_6_12625001 chr3L_12625001 RAL-306_125b 1971 chr3L 12647902 12647970 chr3L 12648028 12648061 12 122 4.0 0.0 2.0 4.0 159 chr3L 12647902 5` UTR CR32111 + chr3L 12647982 5` UTR CR32111 + chr3L 12648061 5` UTR CR32111 + chr3L_12_12645001 chr3L_12645001 RAL-306_125b 1972 chr3L 12675124 12675146 chr3L 12675251 12675273 9 126 15.5 20.0 17.8 0.5 149 chr3L 12675124 intergenic not near genes chr3L 12675198 intergenic not near genes chr3L 12675273 intergenic not near genes chr3L_9_12675001 chr3L_12675001 RAL-306_125b 1973 chr3L 12706594 12706652 chr3L 12706771 12706829 16 173 5.0 6.0 5.5 2.5 235 chr3L 12706594 intron mirr + chr3L 12706712 intron mirr + chr3L 12706829 intron mirr + chr3L_16_12705001 chr3L_12705001 RAL-306_125b 1974 chr3L 12720284 12720351 chr3L 12720419 12720486 15 132 7.0 9.5 8.2 1.6 202 chr3L 12720284 intergenic not near genes chr3L 12720385 intergenic not near genes chr3L 12720486 intergenic not near genes chr3L_15_12720001 chr3L_12720001 RAL-306_125b 1975 chr3L 12722247 12722285 chr3L 12722379 12722417 8 131 2.5 4.5 3.5 1.8 170 chr3L 12722247 intergenic not near genes chr3L 12722332 intergenic not near genes chr3L 12722417 intergenic not near genes chr3L_8_12720001 chr3L_12720001 RAL-306_125b 1976 chr3L 12727990 12728042 chr3L 12728124 12728176 11 133 5.0 10.0 7.5 1.3 186 chr3L 12727990 intergenic not near genes chr3L 12728083 intergenic not near genes chr3L 12728176 intergenic not near genes chr3L_11_12725001 chr3L_12725001 RAL-306_125b 1977 chr3L 12792089 12792169 chr3L 12792239 12792318 25 148 3.0 7.5 5.2 4.0 229 chr3L 12792089 intron,intron Atg1 -,CG42709 + chr3L 12792204 intron,intron Atg1 -,CG42709 + chr3L 12792318 intron,intron Atg1 -,CG42709 + chr3L_25_12790001 chr3L_12790001 RAL-306_125b 1978 chr3L 12799803 12799835 chr3L 12799961 12799993 15 158 13.5 22.5 18.0 0.8 190 chr3L 12799803 intron Atg1 - chr3L 12799898 intron Atg1 - chr3L 12799993 intron Atg1 - chr3L_15_12795001 chr3L_12795001 RAL-306_125b 1979 chr3L 12801937 12801970 chr3L 12802063 12802096 12 124 13.0 7.5 10.2 1.1 159 chr3L 12801937 intron Atg1 - chr3L 12802016 intron Atg1 - chr3L 12802096 intron Atg1 - chr3L_12_12800001 chr3L_12800001 RAL-306_125b 1980 chr3L 12801972 12802006 chr3L 12802060 12802132 19 120 5.0 7.5 6.2 2.6 160 chr3L 12801972 intron Atg1 - chr3L 12802052 intron Atg1 - chr3L 12802132 intron Atg1 - chr3L_19_12800001 chr3L_12800001 RAL-306_125b 1981 chr3L 12857948 12857997 chr3L 12858093 12858142 22 145 2.5 3.0 2.8 5.8 194 chr3L 12857948 3` UTR CG32107 - chr3L 12858045 3` UTR CG32107 - chr3L 12858142 3` UTR CG32107 - chr3L_22_12855001 chr3L_12855001 RAL-306_125b 1982 chr3L 12867988 12868054 chr3L 12868117 12868159 21 132 10.5 6.0 8.2 2.3 171 chr3L 12867988 intergenic not near genes chr3L 12868074 intergenic not near genes chr3L 12868159 intergenic not near genes chr3L_21_12865001 chr3L_12865001 RAL-306_125b 1983 chr3L 12874883 12874952 chr3L 12877225 12877294 jockey 35 2340 3.0 7.0 5.0 5.8 2411 chr3L 12874883 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877294 intergenic not near genes chr3L_35_12875001 chr3L_12875001 RAL-306_125b 1984 chr3L 12919260 12919298 chr3L 12924763 12924834 Rt1c 9 5516 10.5 9.0 9.8 0.8 5574 chr3L 12919260 intergenic not near genes chr3L 12922047 intergenic not near genes chr3L 12924834 intergenic not near genes chr3L_9_12920001 chr3L_12920001 RAL-306_125b 1985 chr3L 12943826 12943854 chr3L 12943967 12943995 15 141 7.5 0.0 3.8 3.1 169 chr3L 12943826 intergenic not near genes chr3L 12943910 intergenic not near genes chr3L 12943995 intergenic not near genes chr3L_15_12940001 chr3L_12940001 RAL-306_125b 1986 chr3L 12957736 12957807 chr3L 12962268 12962339 copia 18 4531 2.5 9.0 5.8 2.6 4603 chr3L 12957736 intergenic not near genes chr3L 12960038 intergenic not near genes chr3L 12962339 intergenic not near genes chr3L_18_12960001 chr3L_12960001 RAL-306_125b 1987 chr3L 12978276 12978344 chr3L 12978423 12978491 24 145 8.5 5.0 6.8 3.1 215 chr3L 12978276 intergenic not near genes chr3L 12978384 intergenic not near genes chr3L 12978491 intergenic not near genes chr3L_24_12975001 chr3L_12975001 RAL-306_125b 1988 chr3L 12979866 12979893 chr3L 12979989 12980028 10 125 14.5 9.5 12.0 0.8 162 chr3L 12979866 intergenic not near genes chr3L 12979947 intergenic not near genes chr3L 12980028 intergenic not near genes chr3L_10_12975001 chr3L_12975001 RAL-306_125b 1989 chr3L 12979897 12979924 chr3L 12979987 12980034 9 117 10.0 9.5 9.8 0.8 137 chr3L 12979897 intergenic not near genes chr3L 12979966 intergenic not near genes chr3L 12980034 intergenic not near genes chr3L_9_12975001 chr3L_12975001 RAL-306_125b 1990 chr3L 12987350 12987383 chr3L 12987482 12987514 4 132 0.0 2.0 1.0 2.0 164 chr3L 12987350 intergenic not near genes chr3L 12987432 intergenic not near genes chr3L 12987514 intergenic not near genes chr3L_4_12985001 chr3L_12985001 RAL-306_125b 1991 chr3L 13007648 13007920 chr3L 13007777 13008069 19 130 24.5 5.0 14.8 1.2 421 chr3L 13007648 exon CG11263 + chr3L 13007858 3` UTR CG11263 + chr3L 13008069 intergenic CG11263 +,CG14117 + chr3L_19_13005001 chr3L_13005001 RAL-306_125b 1992 chr3L 13017869 13017917 chr3L 13018001 13018049 20 130 8.5 14.5 11.5 1.6 180 chr3L 13017869 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017959 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018049 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_20_13015001 chr3L_13015001 RAL-306_125b 1993 chr3L 13029478 13029555 chr3L 13029609 13029679 15 127 3.0 7.0 5.0 2.5 201 chr3L 13029478 intron CG17672 + chr3L 13029578 intron CG17672 + chr3L 13029679 intron CG17672 + chr3L_15_13025001 chr3L_13025001 RAL-306_125b 1994 chr3L 13050521 13050587 chr3L 13050650 13050716 20 129 12.0 5.5 8.8 2.0 195 chr3L 13050521 intergenic not near genes chr3L 13050618 intergenic not near genes chr3L 13050716 intergenic not near genes chr3L_20_13050001 chr3L_13050001 RAL-306_125b 1995 chr3L 13069512 13069579 chr3L 13069641 13069708 21 128 6.5 6.5 6.5 2.8 196 chr3L 13069512 intergenic not near genes chr3L 13069610 intergenic not near genes chr3L 13069708 intergenic not near genes chr3L_21_13065001 chr3L_13065001 RAL-306_125b 1996 chr3L 13137614 13137678 chr3L 13137737 13137764 13 125 7.5 6.0 6.8 1.7 150 chr3L 13137614 intergenic not near genes chr3L 13137689 intergenic not near genes chr3L 13137764 intergenic not near genes chr3L_13_13135001 chr3L_13135001 RAL-306_125b 1997 chr3L 13182441 13182473 chr3L 13182533 13182601 19 125 5.0 4.0 4.5 3.5 160 chr3L 13182441 intergenic not near genes chr3L 13182521 intergenic not near genes chr3L 13182601 intergenic not near genes chr3L_19_13180001 chr3L_13180001 RAL-306_125b 1998 chr3L 13197054 13197117 chr3L 13197228 13197284 12 173 1.5 5.0 3.2 2.9 230 chr3L 13197054 intergenic not near genes chr3L 13197169 intergenic not near genes chr3L 13197284 intergenic not near genes chr3L_12_13195001 chr3L_13195001 RAL-306_125b 1999 chr3L 13200571 13200604 chr3L 13200703 13200736 INE-1 9 132 6.5 14.5 10.5 0.8 165 chr3L 13200571 intergenic not near genes chr3L 13200654 intergenic not near genes chr3L 13200736 intergenic not near genes chr3L_9_13200001 chr3L_13200001 RAL-306_125b 2000 chr3L 13205211 13205220 chr3L 13205347 13205356 5 136 17.0 11.5 14.2 0.3 145 chr3L 13205211 intergenic not near genes chr3L 13205284 intergenic not near genes chr3L 13205356 intergenic not near genes chr3L_5_13205001 chr3L_13205001 RAL-306_125b 2001 chr3L 13205224 13205263 chr3L 13205346 13205394 15 133 4.5 11.0 7.8 1.7 170 chr3L 13205224 intergenic not near genes chr3L 13205309 intergenic not near genes chr3L 13205394 intergenic not near genes chr3L_15_13205001 chr3L_13205001 RAL-306_125b 2002 chr3L 13245052 13245094 chr3L 13245233 13245235 12 172 12.5 5.0 8.8 1.2 183 chr3L 13245052 intron caps + chr3L 13245144 intron caps + chr3L 13245235 intron caps + chr3L_12_13245001 chr3L_13245001 RAL-306_125b 2003 chr3L 13264745 13264753 chr3L 13264871 13264879 5 126 14.0 4.5 9.2 0.5 134 chr3L 13264745 intron caps + chr3L 13264812 intron caps + chr3L 13264879 intron caps + chr3L_5_13260001 chr3L_13260001 RAL-306_125b 2004 chr3L 13305473 13305534 chr3L 13305625 13305687 16 152 3.5 4.0 3.8 3.3 214 chr3L 13305473 intergenic not near genes chr3L 13305580 intergenic not near genes chr3L 13305687 intergenic not near genes chr3L_16_13305001 chr3L_13305001 RAL-306_125b 2005 chr3L 13311755 13311819 chr3L 13311883 13311947 23 128 10.5 12.5 11.5 1.8 192 chr3L 13311755 intergenic not near genes chr3L 13311851 intergenic not near genes chr3L 13311947 intergenic not near genes chr3L_23_13310001 chr3L_13310001 RAL-306_125b 2006 chr3L 13314591 13314611 chr3L 13314683 13314744 9 126 9.5 8.5 9.0 0.9 153 chr3L 13314591 intergenic not near genes chr3L 13314668 intergenic not near genes chr3L 13314744 intergenic not near genes chr3L_9_13310001 chr3L_13310001 RAL-306_125b 2007 chr3L 13320567 13320585 chr3L 13320708 13320719 8 140 18.0 8.0 13.0 0.6 152 chr3L 13320567 intergenic not near genes chr3L 13320643 intergenic not near genes chr3L 13320719 intergenic not near genes chr3L_8_13320001 chr3L_13320001 RAL-306_125b 2008 chr3L 13320588 13320607 chr3L 13320703 13320730 7 134 13.0 7.0 10.0 0.6 142 chr3L 13320588 intergenic not near genes chr3L 13320659 intergenic not near genes chr3L 13320730 intergenic not near genes chr3L_7_13320001 chr3L_13320001 RAL-306_125b 2009 chr3L 13320615 13320636 chr3L 13320697 13320776 5 120 8.0 6.5 7.2 0.6 161 chr3L 13320615 intergenic not near genes chr3L 13320696 intergenic not near genes chr3L 13320776 intergenic not near genes chr3L_5_13320001 chr3L_13320001 RAL-306_125b 2010 chr3L 13330792 13330865 chr3L 13330926 13331013 15 136 2.0 1.0 1.5 6.0 221 chr3L 13330792 intergenic not near genes chr3L 13330902 intergenic not near genes chr3L 13331013 intergenic not near genes chr3L_15_13330001 chr3L_13330001 RAL-306_125b 2011 chr3L 13337131 13337154 chr3L 13337272 13337280 9 139 3.5 7.5 5.5 1.4 149 chr3L 13337131 intergenic not near genes chr3L 13337206 intergenic not near genes chr3L 13337280 intergenic not near genes chr3L_9_13335001 chr3L_13335001 RAL-306_125b 2012 chr3L 13438427 13438490 chr3L 13438553 13438616 16 124 4.0 5.5 4.8 2.8 189 chr3L 13438427 exon CG10725 + chr3L 13438522 exon CG10725 + chr3L 13438616 exon CG10725 + chr3L_16_13435001 chr3L_13435001 RAL-306_125b 2013 chr3L 13525125 13525129 chr3L 13532971 13532975 roo 4 7846 24.0 10.0 17.0 0.2 7850 chr3L 13525125 intergenic not near genes chr3L 13529050 intergenic not near genes chr3L 13532975 intergenic not near genes chr3L_4_13525001 chr3L_13525001 RAL-306_125b 2014 chr3L 13525135 13525181 chr3L 13532956 13533026 roo 24 7843 11.5 6.5 9.0 2.4 7891 chr3L 13525135 intergenic not near genes chr3L 13529080 intergenic not near genes chr3L 13533026 intergenic not near genes chr3L_24_13525001 chr3L_13525001 RAL-306_125b 2015 chr3L 13574585 13574618 chr3L 13580145 13580179 Rt1c 6 5557 9.5 7.0 8.2 0.7 5594 chr3L 13574585 intron bru-3 - chr3L 13577382 intron bru-3 - chr3L 13580179 intron bru-3 - chr3L_6_13575001 chr3L_13575001 RAL-306_125b 2016 chr3L 13629484 13629508 chr3L 13629643 13629667 7 158 13.5 7.0 10.2 0.6 183 chr3L 13629484 intron bru-3 - chr3L 13629576 intron bru-3 - chr3L 13629667 intron bru-3 - chr3L_7_13625001 chr3L_13625001 RAL-306_125b 2017 chr3L 13629513 13629533 chr3L 13629642 13629692 6 147 7.5 7.0 7.2 0.7 179 chr3L 13629513 intron bru-3 - chr3L 13629602 intron bru-3 - chr3L 13629692 intron bru-3 - chr3L_6_13625001 chr3L_13625001 RAL-306_125b 2018 chr3L 13665547 13665596 chr3L 13665670 13665733 14 135 6.0 6.5 6.2 1.9 186 chr3L 13665547 intron bru-3 - chr3L 13665640 intron bru-3 - chr3L 13665733 intron bru-3 - chr3L_14_13665001 chr3L_13665001 RAL-306_125b 2019 chr3L 13692104 13692154 chr3L 13692243 13692292 5 139 4.0 8.5 6.2 0.7 188 chr3L 13692104 intron bru-3 - chr3L 13692198 intron bru-3 - chr3L 13692292 intron bru-3 - chr3L_5_13690001 chr3L_13690001 RAL-306_125b 2020 chr3L 13739983 13740049 chr3L 13740125 13740191 18 136 3.5 9.5 6.5 2.4 208 chr3L 13739983 intron bru-3 - chr3L 13740087 intron bru-3 - chr3L 13740191 intron bru-3 - chr3L_18_13740001 chr3L_13740001 RAL-306_125b 2021 chr3L 13766862 13766921 chr3L 13767010 13767047 19 145 3.5 7.0 5.2 3.1 185 chr3L 13766862 intron bru-3 - chr3L 13766954 intron bru-3 - chr3L 13767047 intron bru-3 - chr3L_19_13765001 chr3L_13765001 RAL-306_125b 2022 chr3L 13804500 13804568 chr3L 13822831 13822904 roo 21 18331 10.0 5.5 7.8 2.4 18404 chr3L 13804500 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822904 intergenic not near genes chr3L_21_13810001 chr3L_13810001 RAL-306_125b 2023 chr3L 13833927 13834006 chr3L 13834087 13834155 14 159 7.5 5.5 6.5 1.9 228 chr3L 13833927 intergenic not near genes chr3L 13834041 intergenic not near genes chr3L 13834155 intergenic not near genes chr3L_14_13830001 chr3L_13830001 RAL-306_125b 2024 chr3L 13862363 13862436 chr3L 13862777 13862850 35 411 8.0 6.5 7.2 4.3 487 chr3L 13862363 intron CG8745 - chr3L 13862606 intron CG8745 - chr3L 13862850 intron CG8745 - chr3L_35_13860001 chr3L_13860001 RAL-306_125b 2025 chr3L 13884329 13884387 chr3L 13884470 13884528 27 138 7.0 5.0 6.0 3.9 199 chr3L 13884329 intron dysc - chr3L 13884428 intron dysc - chr3L 13884528 intron dysc - chr3L_27_13880001 chr3L_13880001 RAL-306_125b 2026 chr3L 13920369 13920432 chr3L 13920499 13920562 20 129 8.0 5.0 6.5 2.7 193 chr3L 13920369 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920562 intron Rgl - chr3L_20_13920001 chr3L_13920001 RAL-306_125b 2027 chr3L 13931342 13931369 chr3L 13931497 13931524 13 155 3.0 13.5 8.2 1.4 182 chr3L 13931342 intron Gl + chr3L 13931433 intron Gl + chr3L 13931524 intron Gl + chr3L_13_13930001 chr3L_13930001 RAL-306_125b 2028 chr3L 13993960 13994016 chr3L 13994090 13994147 10 131 5.5 4.0 4.8 1.7 187 chr3L 13993960 intergenic 26-29-p + chr3L 13994054 intergenic 26-29-p + chr3L 13994147 intergenic 26-29-p + chr3L_10_13990001 chr3L_13990001 RAL-306_125b 2029 chr3L 14060287 14060332 chr3L 14060513 14060561 12 227 0.0 0.0 0.0 12.0 274 chr3L 14060287 intron CG32138 + chr3L 14060424 intron CG32138 + chr3L 14060561 intron CG32138 + chr3L_12_14060001 chr3L_14060001 RAL-306_125b 2030 chr3L 14092689 14092758 chr3L 14092822 14092891 9 133 6.5 6.0 6.2 1.2 202 chr3L 14092689 intergenic not near genes chr3L 14092790 intergenic not near genes chr3L 14092891 intergenic not near genes chr3L_9_14090001 chr3L_14090001 RAL-306_125b 2031 chr3L 14099387 14099430 chr3L 14099527 14099570 6 138 4.0 9.5 6.8 0.8 183 chr3L 14099387 intergenic not near genes chr3L 14099478 intergenic not near genes chr3L 14099570 intergenic not near genes chr3L_6_14095001 chr3L_14095001 RAL-306_125b 2032 chr3L 14110546 14110613 chr3L 14110678 14110745 17 128 7.0 7.5 7.2 2.1 199 chr3L 14110546 intergenic not near genes chr3L 14110646 intergenic not near genes chr3L 14110745 intergenic not near genes chr3L_17_14110001 chr3L_14110001 RAL-306_125b 2033 chr3L 14118963 14119039 chr3L 14119109 14119154 25 142 5.0 7.0 6.0 3.6 191 chr3L 14118963 intron Sox21b - chr3L 14119058 intron Sox21b - chr3L 14119154 intron Sox21b - chr3L_25_14115001 chr3L_14115001 RAL-306_125b 2034 chr3L 14168294 14168307 chr3L 14168425 14168438 7 130 3.0 0.0 1.5 2.8 144 chr3L 14168294 intergenic not near genes chr3L 14168366 intergenic not near genes chr3L 14168438 intergenic not near genes chr3L_7_14165001 chr3L_14165001 RAL-306_125b 2035 chr3L 14174083 14174089 chr3L 14174209 14174215 6 126 16.0 13.0 14.5 0.4 132 chr3L 14174083 intergenic not near genes chr3L 14174149 intergenic not near genes chr3L 14174215 intergenic not near genes chr3L_6_14170001 chr3L_14170001 RAL-306_125b 2036 chr3L 14194673 14194740 chr3L 14194799 14194850 23 125 12.0 0.0 6.0 3.3 177 chr3L 14194673 intron nuf + chr3L 14194762 intron nuf + chr3L 14194850 intron nuf + chr3L_23_14190001 chr3L_14190001 RAL-306_125b 2037 chr3L 14199309 14199325 chr3L 14199450 14199466 7 141 15.5 10.0 12.8 0.5 157 chr3L 14199309 intron nuf + chr3L 14199388 intron nuf + chr3L 14199466 intron nuf + chr3L_7_14195001 chr3L_14195001 RAL-306_125b 2038 chr3L 14199327 14199367 chr3L 14199432 14199506 22 134 9.5 8.0 8.8 2.2 179 chr3L 14199327 intron nuf + chr3L 14199416 intron nuf + chr3L 14199506 intron nuf + chr3L_22_14195001 chr3L_14195001 RAL-306_125b 2039 chr3L 14211392 14211463 chr3L 14211520 14211590 27 127 6.0 5.5 5.8 4.0 198 chr3L 14211392 intron nuf + chr3L 14211491 intron nuf + chr3L 14211590 intron nuf + chr3L_27_14210001 chr3L_14210001 RAL-306_125b 2040 chr3L 14217424 14217429 chr3L 14217550 14217555 5 126 5.0 7.0 6.0 0.7 131 chr3L 14217424 intron nuf + chr3L 14217490 intron nuf + chr3L 14217555 intron nuf + chr3L_5_14215001 chr3L_14215001 RAL-306_125b 2041 chr3L 14234800 14234856 chr3L 14234947 14235003 25 145 11.5 8.0 9.8 2.3 203 chr3L 14234800 intergenic CG7924 +,CG34244 - chr3L 14234902 intergenic CG34244 -,CG7924 + chr3L 14235003 intergenic CG34244 -,CG7924 + chr3L_25_14230001 chr3L_14230001 RAL-306_125b 2042 chr3L 14245531 14245546 chr3L 14245672 14245690 6 143 11.0 8.0 9.5 0.6 159 chr3L 14245531 3` UTR CR44561 - chr3L 14245610 3` UTR CR44561 - chr3L 14245690 3` UTR CR44561 - chr3L_6_14245001 chr3L_14245001 RAL-306_125b 2043 chr3L 14245548 14245583 chr3L 14245662 14245726 1360 14 142 7.0 6.0 6.5 1.9 178 chr3L 14245548 3` UTR CR44561 - chr3L 14245637 3` UTR CR44561 - chr3L 14245726 intergenic CR44561 -,CR44560 + chr3L_14_14245001 chr3L_14245001 RAL-306_125b 2044 chr3L 14282552 14282605 chr3L 14282677 14282725 12 128 8.5 5.0 6.8 1.5 173 chr3L 14282552 intron fz + chr3L 14282638 intron fz + chr3L 14282725 intron fz + chr3L_12_14280001 chr3L_14280001 RAL-306_125b 2045 chr3L 14295952 14296003 chr3L 14296470 14296539 roo 16 534 6.5 11.0 8.8 1.6 587 chr3L 14295952 intron fz + chr3L 14296246 intron fz + chr3L 14296539 intron fz + chr3L_16_14295001 chr3L_14295001 RAL-306_125b 2046 chr3L 14302816 14302993 chr3L 14302977 14303124 13 126 8.5 17.0 12.8 0.9 308 chr3L 14302816 intron fz + chr3L 14302970 intron fz + chr3L 14303124 intron fz + chr3L_13_14300001 chr3L_14300001 RAL-306_125b 2047 chr3L 14303467 14303498 chr3L 14303638 14303668 4 171 1.0 7.0 4.0 0.8 201 chr3L 14303467 intron fz + chr3L 14303568 intron fz + chr3L 14303668 intron fz + chr3L_4_14300001 chr3L_14300001 RAL-306_125b 2048 chr3L 14311998 14312042 chr3L 14316837 14316906 X-element 14 4849 3.0 4.5 3.8 2.9 4908 chr3L 14311998 exon fz + chr3L 14314452 intron fz + chr3L 14316906 intron fz + chr3L_14_14310001 chr3L_14310001 RAL-306_125b 2049 chr3L 14338263 14338323 chr3L 14338396 14338466 16 144 2.0 5.0 3.5 3.6 203 chr3L 14338263 intron fz + chr3L 14338364 intron fz + chr3L 14338466 intron fz + chr3L_16_14335001 chr3L_14335001 RAL-306_125b 2050 chr3L 14341364 14341437 chr3L 14341549 14341622 19 185 7.5 4.5 6.0 2.7 258 chr3L 14341364 intron fz + chr3L 14341493 intron fz + chr3L 14341622 intron fz + chr3L_19_14340001 chr3L_14340001 RAL-306_125b 2051 chr3L 14356406 14356468 chr3L 14356543 14356605 21 134 5.5 5.5 5.5 3.2 199 chr3L 14356406 intron fz + chr3L 14356506 intron fz + chr3L 14356605 intron fz + chr3L_21_14355001 chr3L_14355001 RAL-306_125b 2052 chr3L 14399129 14399151 chr3L 14399268 14399280 4 136 13.0 0.0 6.5 0.5 151 chr3L 14399129 intergenic not near genes chr3L 14399204 intergenic not near genes chr3L 14399280 intergenic not near genes chr3L_4_14395001 chr3L_14395001 RAL-306_125b 2053 chr3L 14439169 14439241 chr3L 14439382 14439454 20 212 10.5 9.0 9.8 1.9 285 chr3L 14439169 intron bbg - chr3L 14439312 intron bbg - chr3L 14439454 intron bbg - chr3L_20_14435001 chr3L_14435001 RAL-306_125b 2054 chr3L 14455324 14455393 chr3L 14455455 14455524 16 128 4.0 4.0 4.0 3.2 200 chr3L 14455324 intron bbg - chr3L 14455424 intron bbg - chr3L 14455524 intron bbg - chr3L_16_14455001 chr3L_14455001 RAL-306_125b 2055 chr3L 14462838 14462904 chr3L 14462976 14463042 8 132 4.5 6.5 5.5 1.2 204 chr3L 14462838 intron bbg - chr3L 14462940 intron bbg - chr3L 14463042 intron bbg - chr3L_8_14460001 chr3L_14460001 RAL-306_125b 2056 chr3L 14468403 14468462 chr3L 14473659 14473718 copia 23 5256 13.0 5.5 9.2 2.3 5315 chr3L 14468403 intron bbg - chr3L 14471060 intron bbg - chr3L 14473718 intron bbg - chr3L_23_14470001 chr3L_14470001 RAL-306_125b 2057 chr3L 14473850 14473878 chr3L 14473977 14473999 6 126 9.5 4.5 7.0 0.8 149 chr3L 14473850 intron bbg - chr3L 14473924 intron bbg - chr3L 14473999 intron bbg - chr3L_6_14470001 chr3L_14470001 RAL-306_125b 2058 chr3L 14485972 14486047 chr3L 14486103 14486178 17 131 6.5 5.5 6.0 2.4 206 chr3L 14485972 intron bbg - chr3L 14486075 intron bbg - chr3L 14486178 intron bbg - chr3L_17_14485001 chr3L_14485001 RAL-306_125b 2059 chr3L 14522050 14522124 chr3L 14522199 14522273 30 148 6.5 6.5 6.5 4.0 223 chr3L 14522050 intron bbg - chr3L 14522162 intron bbg - chr3L 14522273 intron bbg - chr3L_30_14520001 chr3L_14520001 RAL-306_125b 2060 chr3L 14524295 14524339 chr3L 14529100 14529146 F-element 7 4806 2.0 0.5 1.2 3.2 4851 chr3L 14524295 intron bbg - chr3L 14526720 intron bbg - chr3L 14529146 intron bbg - chr3L_7_14525001 chr3L_14525001 RAL-306_125b 2061 chr3L 14531201 14531241 chr3L 14531354 14531394 5 153 6.0 9.0 7.5 0.6 193 chr3L 14531201 intron bbg - chr3L 14531298 intron bbg - chr3L 14531394 intron bbg - chr3L_5_14530001 chr3L_14530001 RAL-306_125b 2062 chr3L 14546803 14546808 chr3L 14546942 14546962 4 150 0.0 10.0 5.0 0.7 159 chr3L 14546803 intron CG9238 - chr3L 14546882 intron CG9238 - chr3L 14546962 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-306_125b 2063 chr3L 14546809 14546814 chr3L 14546941 14546968 4 147 0.0 10.0 5.0 0.7 159 chr3L 14546809 intron CG9238 - chr3L 14546888 intron CG9238 - chr3L 14546968 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-306_125b 2064 chr3L 14555870 14555937 chr3L 14556002 14556069 26 132 8.5 7.5 8.0 2.9 199 chr3L 14555870 intergenic not near genes chr3L 14555970 intergenic not near genes chr3L 14556069 intergenic not near genes chr3L_26_14555001 chr3L_14555001 RAL-306_125b 2065 chr3L 14596170 14596203 chr3L 14596316 14596349 10 146 11.0 10.5 10.8 0.8 179 chr3L 14596170 intron HGTX - chr3L 14596260 intron HGTX - chr3L 14596349 intron HGTX - chr3L_10_14595001 chr3L_14595001 RAL-306_125b 2066 chr3L 14602931 14603082 chr3L 14603069 14603209 13 139 0.0 0.0 0.0 13.0 278 chr3L 14602931 intergenic not near genes chr3L 14603070 intergenic not near genes chr3L 14603209 intergenic not near genes chr3L_13_14600001 chr3L_14600001 RAL-306_125b 2067 chr3L 14618353 14618424 chr3L 14618618 14618689 29 260 8.0 6.5 7.2 3.5 336 chr3L 14618353 intron shd + chr3L 14618521 intron shd + chr3L 14618689 intron shd + chr3L_29_14615001 chr3L_14615001 RAL-306_125b 2068 chr3L 14627183 14627217 chr3L 14627320 14627354 12 137 7.5 3.5 5.5 1.8 171 chr3L 14627183 intron CG9628 + chr3L 14627268 intron CG9628 + chr3L 14627354 exon CG9628 + chr3L_12_14625001 chr3L_14625001 RAL-306_125b 2069 chr3L 14715705 14715761 chr3L 14715842 14715891 14 136 5.0 4.0 4.5 2.5 186 chr3L 14715705 intron ome + chr3L 14715798 intron ome + chr3L 14715891 intron ome + chr3L_14_14715001 chr3L_14715001 RAL-306_125b 2070 chr3L 14721140 14721205 chr3L 14723033 14723078 Rt1c 8 1884 6.5 5.0 5.8 1.2 1938 chr3L 14721140 intron ome + chr3L 14722109 intron ome + chr3L 14723078 intron ome + chr3L_8_14720001 chr3L_14720001 RAL-306_125b 2071 chr3L 14725554 14725631 chr3L 14728607 14728683 Doc 15 3050 7.5 3.5 5.5 2.3 3129 chr3L 14725554 intron ome + chr3L 14727118 intron ome + chr3L 14728683 intron ome + chr3L_15_14725001 chr3L_14725001 RAL-306_125b 2072 chr3L 14840308 14840351 chr3L 14840463 14840506 11 151 2.0 5.0 3.5 2.4 198 chr3L 14840308 intron CG17839 + chr3L 14840407 intron CG17839 + chr3L 14840506 intron CG17839 + chr3L_11_14840001 chr3L_14840001 RAL-306_125b 2073 chr3L 14870039 14870071 chr3L 14870165 14870197 9 126 5.5 8.5 7.0 1.1 158 chr3L 14870039 intron CG17839 + chr3L 14870118 intron CG17839 + chr3L 14870197 intron CG17839 + chr3L_9_14870001 chr3L_14870001 RAL-306_125b 2074 chr3L 14893610 14893614 chr3L 14893745 14893749 4 135 20.0 7.0 13.5 0.3 139 chr3L 14893610 intergenic CG34245 - chr3L 14893680 intergenic CG34245 - chr3L 14893749 3` UTR CG34245 - chr3L_4_14890001 chr3L_14890001 RAL-306_125b 2075 chr3L 14893617 14893678 chr3L 14893741 14893778 23 128 7.0 6.0 6.5 3.1 161 chr3L 14893617 intergenic CG34245 - chr3L 14893698 intergenic CG34245 - chr3L 14893778 3` UTR CG34245 - chr3L_23_14890001 chr3L_14890001 RAL-306_125b 2076 chr3L 14913869 14913930 chr3L 14913979 14914057 18 121 8.5 10.5 9.5 1.7 188 chr3L 14913869 intron DCX-EMAP + chr3L 14913963 intron DCX-EMAP + chr3L 14914057 intron DCX-EMAP + chr3L_18_14910001 chr3L_14910001 RAL-306_125b 2077 chr3L 14922065 14922135 chr3L 14922223 14922293 16 153 11.0 2.0 6.5 2.1 228 chr3L 14922065 intron DCX-EMAP + chr3L 14922179 intron DCX-EMAP + chr3L 14922293 intron DCX-EMAP + chr3L_16_14920001 chr3L_14920001 RAL-306_125b 2078 chr3L 14933404 14933454 chr3L 14933536 14933586 15 132 7.0 12.5 9.8 1.4 182 chr3L 14933404 intron DCX-EMAP + chr3L 14933495 intron DCX-EMAP + chr3L 14933586 intron DCX-EMAP + chr3L_15_14930001 chr3L_14930001 RAL-306_125b 2079 chr3L 14961834 14961912 chr3L 14962234 14962312 42 397 4.5 7.0 5.8 6.2 478 chr3L 14961834 intergenic not near genes chr3L 14962073 intergenic not near genes chr3L 14962312 intergenic not near genes chr3L_42_14960001 chr3L_14960001 RAL-306_125b 2080 chr3L 14970752 14970761 chr3L 14971114 14971123 F-element 8 362 0.0 22.0 11.0 0.7 371 chr3L 14970752 intergenic Tom + chr3L 14970938 intergenic not near genes chr3L 14971123 intergenic not near genes chr3L_8_14970001 chr3L_14970001 RAL-306_125b 2081 chr3L 15085004 15085081 chr3L 15086220 15086276 1360 29 1214 8.0 6.0 7.0 3.6 1272 chr3L 15085004 intron cp309 - chr3L 15085640 intron cp309 - chr3L 15086276 intron cp309 - chr3L_29_15085001 chr3L_15085001 RAL-306_125b 2082 chr3L 15094924 15094961 chr3L 15095070 15095107 10 146 7.5 1.5 4.5 1.8 183 chr3L 15094924 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095016 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095107 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_10_15095001 chr3L_15095001 RAL-306_125b 2083 chr3L 15100391 15100463 chr3L 15100534 15100551 8 136 2.5 7.0 4.8 1.4 160 chr3L 15100391 intron,3` UTR CTPsyn +,CR43972 - chr3L 15100471 intron,3` UTR CTPsyn +,CR43972 - chr3L 15100551 intron,3` UTR CTPsyn +,CR43972 - chr3L_8_15100001 chr3L_15100001 RAL-306_125b 2084 chr3L 15164973 15165046 chr3L 15165121 15165195 14 148 1.5 3.0 2.2 4.4 222 chr3L 15164973 intergenic not near genes chr3L 15165084 intergenic not near genes chr3L 15165195 intergenic not near genes chr3L_14_15165001 chr3L_15165001 RAL-306_125b 2085 chr3L 15233516 15233574 chr3L 15233647 15233705 26 130 7.0 6.0 6.5 3.5 189 chr3L 15233516 intergenic not near genes chr3L 15233610 intergenic not near genes chr3L 15233705 intergenic not near genes chr3L_26_15230001 chr3L_15230001 RAL-306_125b 2086 chr3L 15257397 15257449 chr3L 15257660 15257712 21 259 6.5 4.0 5.2 3.4 315 chr3L 15257397 intergenic not near genes chr3L 15257554 intergenic not near genes chr3L 15257712 intergenic not near genes chr3L_21_15255001 chr3L_15255001 RAL-306_125b 2087 chr3L 15267892 15267911 chr3L 15268029 15268048 11 136 0.0 0.0 0.0 11.0 156 chr3L 15267892 intergenic not near genes chr3L 15267970 intergenic not near genes chr3L 15268048 intergenic not near genes chr3L_11_15265001 chr3L_15265001 RAL-306_125b 2088 chr3L 15295727 15295792 chr3L 15298620 15298685 gypsy5 31 2890 10.0 7.5 8.8 3.2 2958 chr3L 15295727 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298685 intergenic Best4 + chr3L_31_15295001 chr3L_15295001 RAL-306_125b 2089 chr3L 15333088 15333162 chr3L 15333220 15333260 17 125 7.0 6.0 6.5 2.3 172 chr3L 15333088 intergenic CR43247 + chr3L 15333174 intergenic CR43247 + chr3L 15333260 intergenic CR43247 + chr3L_17_15330001 chr3L_15330001 RAL-306_125b 2090 chr3L 15335426 15335494 chr3L 15335598 15335666 31 171 11.5 7.0 9.2 3.0 240 chr3L 15335426 intron CR43992 + chr3L 15335546 intron CR43992 + chr3L 15335666 intron CR43992 + chr3L_31_15335001 chr3L_15335001 RAL-306_125b 2091 chr3L 15423724 15423776 chr3L 15426618 15426670 opus 21 2893 11.0 0.5 5.8 3.1 2946 chr3L 15423724 intergenic not near genes chr3L 15425197 intergenic not near genes chr3L 15426670 intergenic not near genes chr3L_21_15425001 chr3L_15425001 RAL-306_125b 2092 chr3L 15444621 15444682 chr3L 15444755 15444819 16 140 5.0 4.0 4.5 2.9 198 chr3L 15444621 intergenic not near genes chr3L 15444720 intergenic not near genes chr3L 15444819 intergenic not near genes chr3L_16_15440001 chr3L_15440001 RAL-306_125b 2093 chr3L 15465990 15466137 chr3L 15466122 15466283 10 140 0.0 0.0 0.0 10.0 293 chr3L 15465990 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466283 intergenic not near genes chr3L_10_15465001 chr3L_15465001 RAL-306_125b 2094 chr3L 15502472 15502529 chr3L 15502600 15502658 12 127 2.0 10.0 6.0 1.7 186 chr3L 15502472 intron CG7272 + chr3L 15502565 intron CG7272 + chr3L 15502658 intron CG7272 + chr3L_12_15500001 chr3L_15500001 RAL-306_125b 2095 chr3L 15515039 15515073 chr3L 15515167 15515191 17 126 15.5 11.5 13.5 1.2 152 chr3L 15515039 intergenic not near genes chr3L 15515115 intergenic not near genes chr3L 15515191 intergenic not near genes chr3L_17_15515001 chr3L_15515001 RAL-306_125b 2096 chr3L 15540890 15540908 chr3L 15541028 15541048 4 138 9.5 6.0 7.8 0.5 158 chr3L 15540890 intron CrebA + chr3L 15540969 intron CrebA + chr3L 15541048 intron CrebA + chr3L_4_15540001 chr3L_15540001 RAL-306_125b 2097 chr3L 15541579 15541645 chr3L 15541720 15541786 21 141 5.5 0.0 2.8 5.5 207 chr3L 15541579 intron CrebA + chr3L 15541682 intron CrebA + chr3L 15541786 intron CrebA + chr3L_21_15540001 chr3L_15540001 RAL-306_125b 2098 chr3L 15554878 15554938 chr3L 15556715 15556775 S-element 23 1837 11.0 9.5 10.2 2.1 1897 chr3L 15554878 intron AGO2 + chr3L 15555826 intron AGO2 + chr3L 15556775 intron AGO2 + chr3L_23_15555001 chr3L_15555001 RAL-306_125b 2099 chr3L 15591847 15591866 chr3L 15592233 15592242 8 385 18.0 7.0 12.5 0.6 395 chr3L 15591847 intron RhoGAP71E + chr3L 15592044 intron RhoGAP71E + chr3L 15592242 intron RhoGAP71E + chr3L_8_15590001 chr3L_15590001 RAL-306_125b 2100 chr3L 15600152 15600197 chr3L 15600303 15600348 13 150 4.5 3.0 3.8 2.7 196 chr3L 15600152 intron RhoGAP71E + chr3L 15600250 intron RhoGAP71E + chr3L 15600348 intron RhoGAP71E + chr3L_13_15600001 chr3L_15600001 RAL-306_125b 2101 chr3L 15633137 15633214 chr3L 15633267 15633344 23 129 5.0 2.5 3.8 4.8 207 chr3L 15633137 intron comm3 - chr3L 15633240 intron comm3 - chr3L 15633344 intron comm3 - chr3L_23_15630001 chr3L_15630001 RAL-306_125b 2102 chr3L 15637164 15637169 chr3L 15637275 15637296 5 124 13.5 11.5 12.5 0.4 132 chr3L 15637164 intron comm3 - chr3L 15637230 intron comm3 - chr3L 15637296 intron comm3 - chr3L_5_15635001 chr3L_15635001 RAL-306_125b 2103 chr3L 15637177 15637180 chr3L 15637294 15637307 4 123 11.0 13.5 12.2 0.3 130 chr3L 15637177 intron comm3 - chr3L 15637242 intron comm3 - chr3L 15637307 intron comm3 - chr3L_4_15635001 chr3L_15635001 RAL-306_125b 2104 chr3L 15637182 15637187 chr3L 15637279 15637314 6 121 11.0 12.0 11.5 0.5 132 chr3L 15637182 intron comm3 - chr3L 15637248 intron comm3 - chr3L 15637314 intron comm3 - chr3L_6_15635001 chr3L_15635001 RAL-306_125b 2105 chr3L 15641733 15641813 chr3L 15641868 15641948 10 135 0.5 3.5 2.0 3.3 215 chr3L 15641733 intron comm3 - chr3L 15641840 intron comm3 - chr3L 15641948 intron comm3 - chr3L_10_15640001 chr3L_15640001 RAL-306_125b 2106 chr3L 15651136 15651192 chr3L 15651269 15651325 13 133 5.5 6.0 5.8 1.9 189 chr3L 15651136 exon CG43084 + chr3L 15651230 exon CG43084 + chr3L 15651325 exon CG43084 + chr3L_13_15650001 chr3L_15650001 RAL-306_125b 2107 chr3L 15737337 15737400 chr3L 15737477 15737529 9 139 5.0 0.5 2.8 2.4 192 chr3L 15737337 intergenic not near genes chr3L 15737433 intergenic not near genes chr3L 15737529 intergenic not near genes chr3L_9_15735001 chr3L_15735001 RAL-306_125b 2108 chr3L 15756837 15756911 chr3L 15756970 15757031 16 130 7.0 0.0 3.5 3.6 194 chr3L 15756837 intergenic not near genes chr3L 15756934 intergenic not near genes chr3L 15757031 intergenic not near genes chr3L_16_15755001 chr3L_15755001 RAL-306_125b 2109 chr3L 15769064 15769119 chr3L 15769206 15769261 17 141 7.5 8.0 7.8 1.9 197 chr3L 15769064 intergenic not near genes chr3L 15769162 intergenic not near genes chr3L 15769261 intergenic not near genes chr3L_17_15765001 chr3L_15765001 RAL-306_125b 2110 chr3L 15781607 15781687 chr3L 15781785 15781886 5 189 3.0 0.0 1.5 2.0 279 chr3L 15781607 intergenic not near genes chr3L 15781746 intergenic not near genes chr3L 15781886 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RAL-306_125b 2111 chr3L 15840385 15840469 chr3L 15840523 15840598 14 128 5.5 5.0 5.2 2.3 213 chr3L 15840385 intron CG32150 - chr3L 15840492 intron CG32150 - chr3L 15840598 intron CG32150 - chr3L_14_15840001 chr3L_15840001 RAL-306_125b 2112 chr3L 15843034 15843046 chr3L 15843226 15843238 4 192 0.0 15.5 7.8 0.5 204 chr3L 15843034 intron CG32150 - chr3L 15843136 intron CG32150 - chr3L 15843238 intron CG32150 - chr3L_4_15840001 chr3L_15840001 RAL-306_125b 2113 chr3L 15899205 15899252 chr3L 15899797 15899869 jockey 11 601 3.0 6.5 4.8 1.9 664 chr3L 15899205 intergenic pHCl - chr3L 15899537 intergenic not near genes chr3L 15899869 intergenic sff - chr3L_11_15895001 chr3L_15895001 RAL-306_125b 2114 chr3L 15914275 15914282 chr3L 15914427 15914434 5 152 15.0 9.0 12.0 0.4 159 chr3L 15914275 intron sff - chr3L 15914354 intron sff - chr3L 15914434 intron sff - chr3L_5_15910001 chr3L_15910001 RAL-306_125b 2115 chr3L 15914283 15914342 chr3L 15914424 15914491 12 140 9.5 9.0 9.2 1.2 208 chr3L 15914283 intron sff - chr3L 15914387 intron sff - chr3L 15914491 intron sff - chr3L_12_15910001 chr3L_15910001 RAL-306_125b 2116 chr3L 15918065 15918124 chr3L 15918210 15918270 21 146 9.5 8.0 8.8 2.1 205 chr3L 15918065 intron sff - chr3L 15918168 intron sff - chr3L 15918270 intron sff - chr3L_21_15915001 chr3L_15915001 RAL-306_125b 2117 chr3L 15929155 15929216 chr3L 15938352 15938413 roo 20 9197 10.5 7.5 9.0 2.0 9258 chr3L 15929155 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938413 intron Pka-C3 - chr3L_20_15930001 chr3L_15930001 RAL-306_125b 2118 chr3L 15946465 15946532 chr3L 15946601 15946666 15 136 12.5 0.5 6.5 2.0 201 chr3L 15946465 intron Pka-C3 - chr3L 15946566 intron Pka-C3 - chr3L 15946666 intron Pka-C3 - chr3L_15_15945001 chr3L_15945001 RAL-306_125b 2119 chr3L 16051269 16051340 chr3L 16051405 16051476 24 135 8.5 11.5 10.0 2.2 207 chr3L 16051269 intergenic th - chr3L 16051372 intergenic th - chr3L 16051476 intergenic th -,Mbs + chr3L_24_16050001 chr3L_16050001 RAL-306_125b 2120 chr3L 16070692 16070760 chr3L 16070819 16070887 19 123 8.0 6.0 7.0 2.4 195 chr3L 16070692 intron Mbs + chr3L 16070790 intron Mbs + chr3L 16070887 exon Mbs + chr3L_19_16070001 chr3L_16070001 RAL-306_125b 2121 chr3L 16145748 16145789 chr3L 16145905 16145919 13 155 0.0 15.5 7.8 1.5 171 chr3L 16145748 intron CG5151 - chr3L 16145834 intron CG5151 - chr3L 16145919 intron CG5151 - chr3L_13_16145001 chr3L_16145001 RAL-306_125b 2122 chr3L 16162589 16162624 chr3L 16162723 16162758 14 132 7.5 13.0 10.2 1.2 169 chr3L 16162589 intron CG5151 - chr3L 16162674 intron CG5151 - chr3L 16162758 intron CG5151 - chr3L_14_16160001 chr3L_16160001 RAL-306_125b 2123 chr3L 16162759 16162821 chr3L 16163115 16163162 27 354 7.0 11.5 9.2 2.6 403 chr3L 16162759 intron CG5151 - chr3L 16162960 intron CG5151 - chr3L 16163162 intron CG5151 - chr3L_27_16160001 chr3L_16160001 RAL-306_125b 2124 chr3L 16184066 16184129 chr3L 16188935 16188983 X-element 21 4865 12.0 7.0 9.5 2.0 4917 chr3L 16184066 intergenic not near genes chr3L 16186524 intergenic not near genes chr3L 16188983 intergenic not near genes chr3L_21_16185001 chr3L_16185001 RAL-306_125b 2125 chr3L 16212766 16212837 chr3L 16212907 16212978 11 141 12.5 0.0 6.2 1.5 212 chr3L 16212766 intergenic CG13073 - chr3L 16212872 intergenic CG13073 - chr3L 16212978 intergenic CG13073 - chr3L_11_16210001 chr3L_16210001 RAL-306_125b 2126 chr3L 16216937 16217024 chr3L 16217083 16217161 7 132 0.0 5.0 2.5 2.0 224 chr3L 16216937 intron CG13073 - chr3L 16217049 intron CG13073 - chr3L 16217161 5` UTR CG13073 - chr3L_7_16215001 chr3L_16215001 RAL-306_125b 2127 chr3L 16359912 16359954 chr3L 16360226 16360274 16 318 4.0 6.5 5.2 2.6 362 chr3L 16359912 intron CG45057 - chr3L 16360093 intron CG45057 - chr3L 16360274 intron CG45057 - chr3L_16_16360001 chr3L_16360001 RAL-306_125b 2128 chr3L 16360842 16360912 chr3L 16360965 16361040 34 124 10.5 8.5 9.5 3.2 198 chr3L 16360842 intron CG45057 - chr3L 16360941 intron CG45057 - chr3L 16361040 intron CG45057 - chr3L_34_16360001 chr3L_16360001 RAL-306_125b 2129 chr3L 16431782 16431858 chr3L 16431926 16432003 20 142 4.5 4.5 4.5 3.6 221 chr3L 16431782 intron,intron CG33158 +,dsx-c73A - chr3L 16431892 intron,intron CG33158 +,dsx-c73A - chr3L 16432003 intron,intron CG33158 +,dsx-c73A - chr3L_20_16430001 chr3L_16430001 RAL-306_125b 2130 chr3L 16443807 16443851 chr3L 16446197 16446241 Doc 15 2388 14.0 8.5 11.2 1.2 2434 chr3L 16443807 intron,intron CG33158 +,dsx-c73A - chr3L 16445024 intron,intron CG33158 +,dsx-c73A - chr3L 16446241 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-306_125b 2131 chr3L 16443853 16443873 chr3L 16446193 16446263 Doc 9 2381 10.0 7.5 8.8 0.9 2410 chr3L 16443853 intron,intron CG33158 +,dsx-c73A - chr3L 16445058 intron,intron CG33158 +,dsx-c73A - chr3L 16446263 intron,intron CG33158 +,dsx-c73A - chr3L_9_16445001 chr3L_16445001 RAL-306_125b 2132 chr3L 16449972 16450044 chr3L 16450107 16450179 20 133 5.5 5.5 5.5 3.1 207 chr3L 16449972 intron,intron CG33158 +,dsx-c73A - chr3L 16450076 intron,intron CG33158 +,dsx-c73A - chr3L 16450179 intron,exon CG33158 +,dsx-c73A - chr3L_20_16450001 chr3L_16450001 RAL-306_125b 2133 chr3L 16457482 16457553 chr3L 16457628 16457698 13 145 6.0 4.5 5.2 2.1 216 chr3L 16457482 intron CG33158 + chr3L 16457590 intron CG33158 + chr3L 16457698 intron CG33158 + chr3L_13_16455001 chr3L_16455001 RAL-306_125b 2134 chr3L 16462682 16462756 chr3L 16462826 16462900 19 143 0.5 5.0 2.8 5.0 218 chr3L 16462682 intron CG33158 + chr3L 16462791 intron CG33158 + chr3L 16462900 intron CG33158 + chr3L_19_16460001 chr3L_16460001 RAL-306_125b 2135 chr3L 16493940 16494001 chr3L 16494507 16494568 jockey 21 562 7.0 9.0 8.0 2.3 628 chr3L 16493940 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494254 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494568 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_21_16490001 chr3L_16490001 RAL-306_125b 2136 chr3L 16503638 16503652 chr3L 16503740 16503779 5 117 4.5 10.0 7.2 0.6 141 chr3L 16503638 intron CG43373 - chr3L 16503708 intron CG43373 - chr3L 16503779 intron CG43373 - chr3L_5_16500001 chr3L_16500001 RAL-306_125b 2137 chr3L 16533515 16533578 chr3L 16533676 16533734 17 160 0.0 4.5 2.2 5.3 219 chr3L 16533515 intron CG43373 - chr3L 16533624 intron CG43373 - chr3L 16533734 intron CG43373 - chr3L_17_16530001 chr3L_16530001 RAL-306_125b 2138 chr3L 16537822 16537872 chr3L 16537939 16537960 19 133 4.5 10.5 7.5 2.2 138 chr3L 16537822 intron CG43373 - chr3L 16537891 intron CG43373 - chr3L 16537960 intron CG43373 - chr3L_19_16535001 chr3L_16535001 RAL-306_125b 2139 chr3L 16540013 16540022 chr3L 16540151 16540160 6 138 16.0 3.5 9.8 0.6 147 chr3L 16540013 intron CG43373 - chr3L 16540086 intron CG43373 - chr3L 16540160 intron CG43373 - chr3L_6_16540001 chr3L_16540001 RAL-306_125b 2140 chr3L 16540024 16540084 chr3L 16540149 16540222 23 136 6.0 3.0 4.5 4.2 198 chr3L 16540024 intron CG43373 - chr3L 16540123 intron CG43373 - chr3L 16540222 intron CG43373 - chr3L_23_16540001 chr3L_16540001 RAL-306_125b 2141 chr3L 16563188 16563196 chr3L 16563319 16563327 4 131 13.5 1.0 7.2 0.5 139 chr3L 16563188 intergenic Mipp1 - chr3L 16563258 intergenic Mipp1 - chr3L 16563327 intergenic Mipp1 - chr3L_4_16560001 chr3L_16560001 RAL-306_125b 2142 chr3L 16563197 16563256 chr3L 16563318 16563402 5 131 4.0 1.0 2.5 1.4 205 chr3L 16563197 intergenic Mipp1 - chr3L 16563300 intergenic Mipp1 - chr3L 16563402 intergenic Mipp1 - chr3L_5_16560001 chr3L_16560001 RAL-306_125b 2143 chr3L 16571520 16571595 chr3L 16571650 16571726 35 128 2.5 6.0 4.2 6.7 206 chr3L 16571520 intron Mipp1 - chr3L 16571623 intron Mipp1 - chr3L 16571726 intron Mipp1 - chr3L_35_16570001 chr3L_16570001 RAL-306_125b 2144 chr3L 16581727 16581797 chr3L 16582141 16582183 31 411 8.0 9.0 8.5 3.3 456 chr3L 16581727 5` UTR CR43727 + chr3L 16581955 5` UTR CR43727 + chr3L 16582183 5` UTR CR43727 + chr3L_31_16580001 chr3L_16580001 RAL-306_125b 2145 chr3L 16616469 16616506 chr3L 16621847 16621884 297 11 5378 10.0 7.5 8.8 1.1 5415 chr3L 16616469 3` UTR Abl - chr3L 16619176 3` UTR Abl - chr3L 16621884 3` UTR Abl - chr3L_11_16615001 chr3L_16615001 RAL-306_125b 2146 chr3L 16616507 16616533 chr3L 16621841 16621911 297 11 5371 6.5 7.0 6.8 1.4 5404 chr3L 16616507 3` UTR Abl - chr3L 16619209 3` UTR Abl - chr3L 16621911 3` UTR Abl - chr3L_11_16615001 chr3L_16615001 RAL-306_125b 2147 chr3L 16683977 16684033 chr3L 16689248 16689304 copia 18 5268 11.5 7.5 9.5 1.7 5327 chr3L 16683977 intron,intron Lasp -,CG43954 - chr3L 16686640 intron,intron Lasp -,CG43954 - chr3L 16689304 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_18_16685001 chr3L_16685001 RAL-306_125b 2148 chr3L 16714800 16714862 chr3L 16714934 16714971 23 130 3.0 7.0 5.0 3.8 171 chr3L 16714800 intron Dab + chr3L 16714886 intron Dab + chr3L 16714971 intron Dab + chr3L_23_16710001 chr3L_16710001 RAL-306_125b 2149 chr3L 16746789 16746847 chr3L 16746928 16746980 12 138 4.0 6.0 5.0 2.0 191 chr3L 16746789 intergenic not near genes chr3L 16746884 intergenic not near genes chr3L 16746980 intergenic not near genes chr3L_12_16745001 chr3L_16745001 RAL-306_125b 2150 chr3L 16772449 16772512 chr3L 16772589 16772652 26 138 9.0 6.5 7.8 3.0 203 chr3L 16772449 intron Nrt + chr3L 16772550 intron Nrt + chr3L 16772652 intron Nrt + chr3L_26_16770001 chr3L_16770001 RAL-306_125b 2151 chr3L 16796994 16797062 chr3L 16797390 16797441 34 392 5.0 4.5 4.8 5.9 447 chr3L 16796994 intron CG9674 - chr3L 16797218 intron CG9674 - chr3L 16797441 intron CG9674 - chr3L_34_16795001 chr3L_16795001 RAL-306_125b 2152 chr3L 16807996 16808071 chr3L 16808122 16808200 17 125 6.5 5.0 5.8 2.5 204 chr3L 16807996 intron nudC + chr3L 16808098 intron nudC + chr3L 16808200 intron nudC + chr3L_17_16805001 chr3L_16805001 RAL-306_125b 2153 chr3L 16844975 16845042 chr3L 16845138 16845205 21 163 8.5 9.5 9.0 2.1 230 chr3L 16844975 5` UTR CG9669 - chr3L 16845090 intergenic CG9669 -,CG9715 + chr3L 16845205 intergenic CG9715 +,CG9669 - chr3L_21_16845001 chr3L_16845001 RAL-306_125b 2154 chr3L 16860983 16861054 chr3L 16861135 16861206 19 148 7.0 10.5 8.8 1.9 223 chr3L 16860983 intron,exon Rh4 -,CG13029 + chr3L 16861094 intron,intron Rh4 -,CG13029 + chr3L 16861206 intron,exon Rh4 -,CG13029 + chr3L_19_16860001 chr3L_16860001 RAL-306_125b 2155 chr3L 16866166 16866222 chr3L 16866307 16866362 14 140 9.5 4.5 7.0 1.8 196 chr3L 16866166 intron Lmpt + chr3L 16866264 intron Lmpt + chr3L 16866362 intron Lmpt + chr3L_14_16865001 chr3L_16865001 RAL-306_125b 2156 chr3L 16867486 16867568 chr3L 16867614 16867653 10 123 7.0 8.0 7.5 1.2 167 chr3L 16867486 intron Lmpt + chr3L 16867570 intron Lmpt + chr3L 16867653 intron Lmpt + chr3L_10_16865001 chr3L_16865001 RAL-306_125b 2157 chr3L 16873303 16873350 chr3L 16873458 16873505 15 155 12.5 14.5 13.5 1.0 202 chr3L 16873303 intron Lmpt + chr3L 16873404 intron Lmpt + chr3L 16873505 intron Lmpt + chr3L_15_16870001 chr3L_16870001 RAL-306_125b 2158 chr3L 16875334 16875391 chr3L 16875530 16875587 17 196 0.0 11.0 5.5 2.6 253 chr3L 16875334 intron Lmpt + chr3L 16875460 intron Lmpt + chr3L 16875587 intron Lmpt + chr3L_17_16875001 chr3L_16875001 RAL-306_125b 2159 chr3L 16894919 16894992 chr3L 16895053 16895127 34 131 6.0 5.0 5.5 5.2 208 chr3L 16894919 intron Lmpt + chr3L 16895023 intron Lmpt + chr3L 16895127 intron Lmpt + chr3L_34_16895001 chr3L_16895001 RAL-306_125b 2160 chr3L 16941364 16941393 chr3L 16941510 16941544 9 149 11.0 1.0 6.0 1.3 180 chr3L 16941364 intron Cpr73D - chr3L 16941454 intron Cpr73D - chr3L 16941544 intron Cpr73D - chr3L_9_16940001 chr3L_16940001 RAL-306_125b 2161 chr3L 16945699 16945755 chr3L 16954887 16954952 roo 18 9192 5.5 2.5 4.0 3.6 9253 chr3L 16945699 exon Obp73a + chr3L 16950326 intergenic not near genes chr3L 16954952 5` UTR Nc73EF + chr3L_18_16950001 chr3L_16950001 RAL-306_125b 2162 chr3L 17026756 17026822 chr3L 17026872 17026953 29 129 11.0 4.5 7.8 3.3 197 chr3L 17026756 exon Fit2 + chr3L 17026854 3` UTR Fit2 + chr3L 17026953 3` UTR Fit2 + chr3L_29_17025001 chr3L_17025001 RAL-306_125b 2163 chr3L 17027127 17027184 chr3L 17027269 17027302 24 141 3.0 14.0 8.5 2.5 175 chr3L 17027127 intergenic Fit2 +,CG7730 + chr3L 17027214 intergenic Fit2 +,CG7730 + chr3L 17027302 intergenic Fit2 +,CG7730 + chr3L_24_17025001 chr3L_17025001 RAL-306_125b 2164 chr3L 17034891 17034962 chr3L 17035124 17035200 G2 20 237 6.5 11.5 9.0 2.0 309 chr3L 17034891 intergenic not near genes chr3L 17035046 intergenic not near genes chr3L 17035200 intergenic beg + chr3L_20_17035001 chr3L_17035001 RAL-306_125b 2165 chr3L 17084960 17085026 chr3L 17094159 17094225 roo 28 9198 11.5 9.5 10.5 2.4 9265 chr3L 17084960 intron Rbp6 - chr3L 17089592 intron Rbp6 - chr3L 17094225 intron Rbp6 - chr3L_28_17085001 chr3L_17085001 RAL-306_125b 2166 chr3L 17104951 17105011 chr3L 17105078 17105118 10 119 3.5 4.5 4.0 2.0 167 chr3L 17104951 intron Rbp6 - chr3L 17105034 intron Rbp6 - chr3L 17105118 intron Rbp6 - chr3L_10_17105001 chr3L_17105001 RAL-306_125b 2167 chr3L 17107311 17107332 chr3L 17107450 17107471 5 138 12.0 8.5 10.2 0.4 160 chr3L 17107311 intron Rbp6 - chr3L 17107391 intron Rbp6 - chr3L 17107471 intron Rbp6 - chr3L_5_17105001 chr3L_17105001 RAL-306_125b 2168 chr3L 17107334 17107374 chr3L 17107438 17107513 10 121 5.0 6.0 5.5 1.5 179 chr3L 17107334 intron Rbp6 - chr3L 17107424 intron Rbp6 - chr3L 17107513 intron Rbp6 - chr3L_10_17105001 chr3L_17105001 RAL-306_125b 2169 chr3L 17117121 17117130 chr3L 17117254 17117265 4 134 0.5 17.5 9.0 0.4 144 chr3L 17117121 intron Rbp6 - chr3L 17117193 intron Rbp6 - chr3L 17117265 intron Rbp6 - chr3L_4_17115001 chr3L_17115001 RAL-306_125b 2170 chr3L 17135541 17135602 chr3L 17135688 17135749 10 147 5.0 9.0 7.0 1.2 208 chr3L 17135541 intron Rbp6 - chr3L 17135645 intron Rbp6 - chr3L 17135749 intron Rbp6 - chr3L_10_17135001 chr3L_17135001 RAL-306_125b 2171 chr3L 17149119 17149142 chr3L 17149250 17149251 10 129 12.0 0.0 6.0 1.4 132 chr3L 17149119 intron Rbp6 - chr3L 17149185 intron Rbp6 - chr3L 17149251 intron Rbp6 - chr3L_10_17145001 chr3L_17145001 RAL-306_125b 2172 chr3L 17157580 17157620 chr3L 17157763 17157798 11 182 6.5 13.5 10.0 1.0 218 chr3L 17157580 intron Rbp6 - chr3L 17157689 intron Rbp6 - chr3L 17157798 intron Rbp6 - chr3L_11_17155001 chr3L_17155001 RAL-306_125b 2173 chr3L 17184465 17184534 chr3L 17184960 17185029 15 490 1.0 7.5 4.2 2.9 564 chr3L 17184465 intron Rbp6 - chr3L 17184747 intron Rbp6 - chr3L 17185029 intron Rbp6 - chr3L_15_17180001 chr3L_17180001 RAL-306_125b 2174 chr3L 17265314 17265333 chr3L 17265443 17265462 7 129 10.0 15.0 12.5 0.5 148 chr3L 17265314 intergenic CG13723 + chr3L 17265388 intergenic CG13723 + chr3L 17265462 intergenic CG13723 + chr3L_7_17265001 chr3L_17265001 RAL-306_125b 2175 chr3L 17310035 17310091 chr3L 17310172 17310230 14 141 1.0 5.0 3.0 3.5 195 chr3L 17310035 intergenic not near genes chr3L 17310132 intergenic not near genes chr3L 17310230 intergenic not near genes chr3L_14_17310001 chr3L_17310001 RAL-306_125b 2176 chr3L 17321677 17321696 chr3L 17321812 17321831 6 135 18.5 13.0 15.8 0.4 154 chr3L 17321677 intergenic not near genes chr3L 17321754 intergenic not near genes chr3L 17321831 intergenic not near genes chr3L_6_17320001 chr3L_17320001 RAL-306_125b 2177 chr3L 17321701 17321736 chr3L 17321801 17321856 17 125 7.5 12.0 9.8 1.6 155 chr3L 17321701 intergenic not near genes chr3L 17321778 intergenic not near genes chr3L 17321856 intergenic not near genes chr3L_17_17320001 chr3L_17320001 RAL-306_125b 2178 chr3L 17367388 17367460 chr3L 17367532 17367604 29 144 5.5 6.5 6.0 4.1 216 chr3L 17367388 intergenic CR45688 +,Cad74A - chr3L 17367496 intergenic CR45688 +,Cad74A - chr3L 17367604 intergenic Cad74A -,CR45688 + chr3L_29_17365001 chr3L_17365001 RAL-306_125b 2179 chr3L 17461969 17461997 chr3L 17462164 17462192 14 194 6.5 5.5 6.0 2.0 223 chr3L 17461969 intergenic not near genes chr3L 17462080 intergenic not near genes chr3L 17462192 intergenic not near genes chr3L_14_17460001 chr3L_17460001 RAL-306_125b 2180 chr3L 17510719 17510760 chr3L 17510841 17510894 12 132 4.5 6.0 5.2 1.9 175 chr3L 17510719 exon Oatp74D + chr3L 17510806 intron Oatp74D + chr3L 17510894 intron Oatp74D + chr3L_12_17510001 chr3L_17510001 RAL-306_125b 2181 chr3L 17516940 17517003 chr3L 17524548 17524601 412 25 7606 8.0 13.0 10.5 2.2 7661 chr3L 17516940 intron CG7564 + chr3L 17520770 intron CG7564 + chr3L 17524601 3` UTR CG7564 + chr3L_25_17520001 chr3L_17520001 RAL-306_125b 2182 chr3L 17569500 17569550 chr3L 17569622 17569666 12 127 12.5 7.5 10.0 1.1 166 chr3L 17569500 intron Eip74EF - chr3L 17569583 intron Eip74EF - chr3L 17569666 intron Eip74EF - chr3L_12_17565001 chr3L_17565001 RAL-306_125b 2183 chr3L 17691932 17691994 chr3L 17692066 17692101 22 133 8.5 3.5 6.0 3.1 169 chr3L 17691932 intron Ccn + chr3L 17692016 intron Ccn + chr3L 17692101 intron Ccn + chr3L_22_17690001 chr3L_17690001 RAL-306_125b 2184 chr3L 17730807 17730869 chr3L 17738187 17738249 mdg1 17 7379 9.5 6.0 7.8 1.9 7442 chr3L 17730807 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738249 intron Ccn + chr3L_17_17730001 chr3L_17730001 RAL-306_125b 2185 chr3L 17753304 17753358 chr3L 17753439 17753494 17 136 5.5 7.5 6.5 2.3 190 chr3L 17753304 exon Adgf-A - chr3L 17753399 intron Adgf-A - chr3L 17753494 exon Adgf-A - chr3L_17_17750001 chr3L_17750001 RAL-306_125b 2186 chr3L 17789798 17789821 chr3L 17789924 17789946 8 126 20.0 9.5 14.8 0.5 148 chr3L 17789798 intergenic not near genes chr3L 17789872 intergenic not near genes chr3L 17789946 intergenic not near genes chr3L_8_17785001 chr3L_17785001 RAL-306_125b 2187 chr3L 17789824 17789870 chr3L 17789920 17789996 8 122 10.0 8.0 9.0 0.8 172 chr3L 17789824 intergenic not near genes chr3L 17789910 intergenic not near genes chr3L 17789996 intergenic not near genes chr3L_8_17785001 chr3L_17785001 RAL-306_125b 2188 chr3L 17790574 17790627 chr3L 17790889 17790942 17 314 6.5 10.0 8.2 1.8 368 chr3L 17790574 intergenic not near genes chr3L 17790758 intergenic CG42815 - chr3L 17790942 intergenic CG42815 - chr3L_17_17790001 chr3L_17790001 RAL-306_125b 2189 chr3L 17791891 17791914 chr3L 17792018 17792041 8 127 7.5 3.5 5.5 1.2 150 chr3L 17791891 intergenic CG42816 -,CG42815 - chr3L 17791966 intergenic CG42816 -,CG42815 - chr3L 17792041 intergenic CG42816 - chr3L_8_17790001 chr3L_17790001 RAL-306_125b 2190 chr3L 17799775 17799837 chr3L 17801612 17801674 S-element 20 1837 6.5 9.5 8.0 2.2 1899 chr3L 17799775 intron NUCB1 - chr3L 17800724 intron NUCB1 - chr3L 17801674 intron NUCB1 - chr3L_20_17800001 chr3L_17800001 RAL-306_125b 2191 chr3L 17884650 17884708 chr3L 17884800 17884857 23 148 6.5 0.5 3.5 5.1 207 chr3L 17884650 intergenic CG5506 - chr3L 17884754 intergenic CG5506 - chr3L 17884857 intergenic CG5506 - chr3L_23_17880001 chr3L_17880001 RAL-306_125b 2192 chr3L 17887829 17887870 chr3L 17887965 17888005 6 135 5.5 13.0 9.2 0.6 176 chr3L 17887829 intron CG7402 + chr3L 17887917 intron CG7402 + chr3L 17888005 intron CG7402 + chr3L_6_17885001 chr3L_17885001 RAL-306_125b 2193 chr3L 17918345 17918361 chr3L 17921198 17921214 opus 8 2853 10.5 11.5 11.0 0.7 2869 chr3L 17918345 intergenic not near genes chr3L 17919780 intergenic not near genes chr3L 17921214 intergenic not near genes chr3L_8_17915001 chr3L_17915001 RAL-306_125b 2194 chr3L 17918362 17918396 chr3L 17921194 17921249 opus 11 2850 8.0 11.0 9.5 1.0 2887 chr3L 17918362 intergenic not near genes chr3L 17919806 intergenic not near genes chr3L 17921249 intergenic not near genes chr3L_11_17915001 chr3L_17915001 RAL-306_125b 2195 chr3L 17987762 17987778 chr3L 17987938 17987947 7 175 16.0 5.0 10.5 0.6 185 chr3L 17987762 intron Eip75B - chr3L 17987854 intron Eip75B - chr3L 17987947 intron Eip75B - chr3L_7_17985001 chr3L_17985001 RAL-306_125b 2196 chr3L 17987781 17987821 chr3L 17987931 17987986 13 168 9.0 4.5 6.8 1.7 205 chr3L 17987781 intron Eip75B - chr3L 17987884 intron Eip75B - chr3L 17987986 intron Eip75B - chr3L_13_17985001 chr3L_17985001 RAL-306_125b 2197 chr3L 17991534 17991582 chr3L 17991662 17991710 28 127 10.0 9.5 9.8 2.6 176 chr3L 17991534 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991710 intron Eip75B - chr3L_28_17990001 chr3L_17990001 RAL-306_125b 2198 chr3L 18026240 18026299 chr3L 18026378 18026437 24 136 11.5 6.5 9.0 2.4 197 chr3L 18026240 intron Eip75B - chr3L 18026338 intron Eip75B - chr3L 18026437 intron Eip75B - chr3L_24_18025001 chr3L_18025001 RAL-306_125b 2199 chr3L 18029911 18029941 chr3L 18030038 18030067 10 127 10.5 0.0 5.2 1.6 156 chr3L 18029911 intron Eip75B - chr3L 18029989 intron Eip75B - chr3L 18030067 intron Eip75B - chr3L_10_18025001 chr3L_18025001 RAL-306_125b 2200 chr3L 18047662 18047739 chr3L 18056768 18056846 roo 22 9105 7.0 7.5 7.2 2.7 9184 chr3L 18047662 intron Eip75B - chr3L 18052254 intron Eip75B - chr3L 18056846 intron Eip75B - chr3L_22_18050001 chr3L_18050001 RAL-306_125b 2201 chr3L 18064012 18064072 chr3L 18064148 18064209 15 136 2.5 6.0 4.2 2.9 197 chr3L 18064012 intron Eip75B - chr3L 18064110 intron Eip75B - chr3L 18064209 intron Eip75B - chr3L_15_18060001 chr3L_18060001 RAL-306_125b 2202 chr3L 18075199 18075248 chr3L 18075514 18075563 23 314 15.5 11.0 13.2 1.6 364 chr3L 18075199 intergenic not near genes chr3L 18075381 intergenic not near genes chr3L 18075563 intergenic not near genes chr3L_23_18075001 chr3L_18075001 RAL-306_125b 2203 chr3L 18092738 18092758 chr3L 18092903 18092923 6 164 15.5 0.5 8.0 0.7 185 chr3L 18092738 intron CG13698 - chr3L 18092830 intron CG13698 - chr3L 18092923 intron CG13698 - chr3L_6_18090001 chr3L_18090001 RAL-306_125b 2204 chr3L 18106212 18106284 chr3L 18106381 18106413 12 151 4.0 1.5 2.8 3.2 201 chr3L 18106212 intergenic CG13698 -,mRpS26 + chr3L 18106312 intergenic CG13698 -,mRpS26 + chr3L 18106413 intergenic mRpS26 +,CG13698 - chr3L_12_18105001 chr3L_18105001 RAL-306_125b 2205 chr3L 18107569 18107635 chr3L 18107712 18107778 25 143 7.0 8.0 7.5 2.9 209 chr3L 18107569 intergenic mRpS26 +,CG5147 - chr3L 18107674 intergenic CG5147 -,mRpS26 + chr3L 18107778 intergenic CG5147 -,mRpS26 + chr3L_25_18105001 chr3L_18105001 RAL-306_125b 2206 chr3L 18118168 18118233 chr3L 18118296 18118361 28 127 3.5 3.5 3.5 6.2 193 chr3L 18118168 3` UTR,intron CG32195 +,CG7341 + chr3L 18118264 3` UTR,intron CG32195 +,CG7341 + chr3L 18118361 3` UTR,intron CG32195 +,CG7341 + chr3L_28_18115001 chr3L_18115001 RAL-306_125b 2207 chr3L 18136640 18136686 chr3L 18136768 18136814 9 128 0.0 11.0 5.5 1.4 174 chr3L 18136640 intergenic CR44669 - chr3L 18136727 intergenic CR44669 - chr3L 18136814 intergenic not near genes chr3L_9_18135001 chr3L_18135001 RAL-306_125b 2208 chr3L 18160628 18160658 chr3L 18160760 18160790 9 132 10.0 8.5 9.2 0.9 162 chr3L 18160628 intron CG13699 - chr3L 18160709 intron CG13699 - chr3L 18160790 intron CG13699 - chr3L_9_18160001 chr3L_18160001 RAL-306_125b 2209 chr3L 18163946 18163988 chr3L 18164198 18164240 12 252 5.5 0.0 2.8 3.2 294 chr3L 18163946 intergenic not near genes chr3L 18164093 intergenic not near genes chr3L 18164240 intergenic not near genes chr3L_12_18160001 chr3L_18160001 RAL-306_125b 2210 chr3L 18164183 18164240 chr3L 18164400 18164457 22 217 1.5 1.5 1.5 8.8 274 chr3L 18164183 intergenic not near genes chr3L 18164320 intergenic not near genes chr3L 18164457 intergenic not near genes chr3L_22_18160001 chr3L_18160001 RAL-306_125b 2211 chr3L 18189539 18189583 chr3L 18190216 18190260 S-element 11 677 15.0 3.0 9.0 1.1 721 chr3L 18189539 intergenic not near genes chr3L 18189900 intergenic not near genes chr3L 18190260 intergenic not near genes chr3L_11_18185001 chr3L_18185001 RAL-306_125b 2212 chr3L 18198925 18198931 chr3L 24821492 24821494 19 6622563 32.5 17.5 25.0 0.7 6622569 chr3L 18198925 intergenic not near genes chr3L 21510210 intron M6 + chr3L 24821494 intergenic not near genes chr3L_19_21510001 chr3L_21510001 RAL-306_125b 2213 chr3L 18207865 18207891 chr3L 18208000 18208026 9 135 12.0 0.0 6.0 1.3 161 chr3L 18207865 intergenic not near genes chr3L 18207946 intergenic not near genes chr3L 18208026 intergenic not near genes chr3L_9_18205001 chr3L_18205001 RAL-306_125b 2214 chr3L 18210688 18210746 chr3L 18210824 18210872 20 128 0.0 6.0 3.0 5.0 184 chr3L 18210688 intergenic not near genes chr3L 18210780 intergenic not near genes chr3L 18210872 intergenic not near genes chr3L_20_18210001 chr3L_18210001 RAL-306_125b 2215 chr3L 18220196 18220225 chr3L 18220641 18220670 5 445 5.5 7.5 6.5 0.7 474 chr3L 18220196 intergenic not near genes chr3L 18220433 intergenic not near genes chr3L 18220670 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-306_125b 2216 chr3L 18223117 18223188 chr3L 18223250 18223330 15 141 3.5 0.0 1.8 5.4 213 chr3L 18223117 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223330 intergenic not near genes chr3L_15_18220001 chr3L_18220001 RAL-306_125b 2217 chr3L 18248910 18248968 chr3L 18249058 18249116 11 148 7.0 3.0 5.0 1.8 206 chr3L 18248910 intergenic not near genes chr3L 18249013 intergenic not near genes chr3L 18249116 intergenic not near genes chr3L_11_18245001 chr3L_18245001 RAL-306_125b 2218 chr3L 18262421 18262484 chr3L 18262554 18262617 17 133 8.5 4.0 6.2 2.4 196 chr3L 18262421 intergenic not near genes chr3L 18262519 intergenic not near genes chr3L 18262617 intergenic not near genes chr3L_17_18260001 chr3L_18260001 RAL-306_125b 2219 chr3L 18311647 18311816 chr3L 18311775 18311952 28 133 0.0 0.0 0.0 28.0 305 chr3L 18311647 intergenic not near genes chr3L 18311800 intergenic not near genes chr3L 18311952 intergenic not near genes chr3L_28_18310001 chr3L_18310001 RAL-306_125b 2220 chr3L 18329331 18329401 chr3L 18329461 18329514 16 124 6.0 4.5 5.2 2.6 183 chr3L 18329331 intergenic not near genes chr3L 18329422 intergenic not near genes chr3L 18329514 intergenic not near genes chr3L_16_18325001 chr3L_18325001 RAL-306_125b 2221 chr3L 18359556 18359625 chr3L 18359698 18359766 17 142 4.0 6.0 5.0 2.8 210 chr3L 18359556 intergenic not near genes chr3L 18359661 intergenic not near genes chr3L 18359766 intergenic not near genes chr3L_17_18355001 chr3L_18355001 RAL-306_125b 2222 chr3L 18436014 18436086 chr3L 18436162 18436234 21 148 2.0 5.0 3.5 4.7 220 chr3L 18436014 intergenic not near genes chr3L 18436124 intergenic not near genes chr3L 18436234 intergenic not near genes chr3L_21_18435001 chr3L_18435001 RAL-306_125b 2223 chr3L 18448573 18448618 chr3L 18448715 18448760 9 142 14.5 7.5 11.0 0.8 187 chr3L 18448573 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448760 intergenic not near genes chr3L_9_18445001 chr3L_18445001 RAL-306_125b 2224 chr3L 18506084 18506146 chr3L 18509597 18509669 F-element 23 3522 7.5 6.5 7.0 2.9 3585 chr3L 18506084 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509669 intergenic not near genes chr3L_23_18505001 chr3L_18505001 RAL-306_125b 2225 chr3L 18528582 18528654 chr3L 18537793 18537865 roo 30 9210 11.0 9.0 10.0 2.7 9283 chr3L 18528582 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537865 intergenic not near genes chr3L_30_18530001 chr3L_18530001 RAL-306_125b 2226 chr3L 18581318 18581363 chr3L 18581433 18581489 9 125 6.5 7.5 7.0 1.1 171 chr3L 18581318 intergenic not near genes chr3L 18581404 intergenic not near genes chr3L 18581489 intergenic not near genes chr3L_9_18580001 chr3L_18580001 RAL-306_125b 2227 chr3L 18593905 18593978 chr3L 18595935 18596011 Doc 18 2032 8.0 5.5 6.8 2.3 2106 chr3L 18593905 intergenic term - chr3L 18594958 intergenic not near genes chr3L 18596011 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-306_125b 2228 chr3L 18638540 18638602 chr3L 18638684 18638746 19 143 6.5 8.0 7.2 2.3 206 chr3L 18638540 intron MYPT-75D + chr3L 18638643 intron MYPT-75D + chr3L 18638746 intron MYPT-75D + chr3L_19_18635001 chr3L_18635001 RAL-306_125b 2229 chr3L 18647659 18647664 chr3L 18647802 18647807 6 143 15.5 9.0 12.2 0.5 148 chr3L 18647659 intron MYPT-75D + chr3L 18647733 intron MYPT-75D + chr3L 18647807 intron MYPT-75D + chr3L_6_18645001 chr3L_18645001 RAL-306_125b 2230 chr3L 18678495 18678545 chr3L 18678746 18678823 17 257 1.0 3.0 2.0 5.7 328 chr3L 18678495 intergenic not near genes chr3L 18678659 intergenic not near genes chr3L 18678823 intergenic not near genes chr3L_17_18675001 chr3L_18675001 RAL-306_125b 2231 chr3L 18685491 18685560 chr3L 18685629 18685698 17 133 5.0 9.5 7.2 2.1 207 chr3L 18685491 exon Cyp12c1 - chr3L 18685594 exon Cyp12c1 - chr3L 18685698 intron Cyp12c1 - chr3L_17_18685001 chr3L_18685001 RAL-306_125b 2232 chr3L 18688149 18688157 chr3L 18688266 18688302 4 133 9.0 8.5 8.8 0.4 153 chr3L 18688149 intergenic not near genes chr3L 18688226 intergenic not near genes chr3L 18688302 intergenic not near genes chr3L_4_18685001 chr3L_18685001 RAL-306_125b 2233 chr3L 18710714 18710787 chr3L 18718716 18718789 Stalker2 30 8002 5.0 3.5 4.2 5.8 8075 chr3L 18710714 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718789 intergenic not near genes chr3L_30_18710001 chr3L_18710001 RAL-306_125b 2234 chr3L 18743501 18743519 chr3L 18743658 18743676 6 157 0.0 10.0 5.0 1.0 175 chr3L 18743501 intergenic not near genes chr3L 18743588 intergenic not near genes chr3L 18743676 intergenic not near genes chr3L_6_18740001 chr3L_18740001 RAL-306_125b 2235 chr3L 15416952 15416953 chr3L 18743738 18743739 5 3326786 25.0 25.5 25.2 0.2 3326787 chr3L 15416952 intergenic not near genes chr3L 17080346 intron Rbp6 - chr3L 18743739 intergenic not near genes chr3L_5_17080001 chr3L_17080001 RAL-306_125b 2236 chr3L 18753502 18753563 chr3L 18753634 18753695 21 132 7.5 10.5 9.0 2.1 193 chr3L 18753502 intron ftz-f1 - chr3L 18753598 intron ftz-f1 - chr3L 18753695 intron ftz-f1 - chr3L_21_18750001 chr3L_18750001 RAL-306_125b 2237 chr3L 18772362 18772432 chr3L 18781093 18781163 roo 23 8731 9.5 9.5 9.5 2.2 8801 chr3L 18772362 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781163 intron ftz-f1 - chr3L_23_18775001 chr3L_18775001 RAL-306_125b 2238 chr3L 18784343 18784402 chr3L 18784482 18784541 16 137 7.0 11.0 9.0 1.6 198 chr3L 18784343 intron ftz-f1 - chr3L 18784442 intron ftz-f1 - chr3L 18784541 intron ftz-f1 - chr3L_16_18780001 chr3L_18780001 RAL-306_125b 2239 chr3L 18795386 18795443 chr3L 18795506 18795534 12 122 2.0 5.0 3.5 2.7 148 chr3L 18795386 intron ftz-f1 - chr3L 18795460 intron ftz-f1 - chr3L 18795534 intron ftz-f1 - chr3L_12_18795001 chr3L_18795001 RAL-306_125b 2240 chr3L 18797282 18797334 chr3L 18797416 18797468 12 134 8.5 14.5 11.5 1.0 186 chr3L 18797282 intron ftz-f1 - chr3L 18797375 intron ftz-f1 - chr3L 18797468 intron ftz-f1 - chr3L_12_18795001 chr3L_18795001 RAL-306_125b 2241 chr3L 18820832 18820898 chr3L 18821061 18821127 30 228 12.0 8.5 10.2 2.7 295 chr3L 18820832 intergenic CG14073 -,HipHop + chr3L 18820980 intergenic HipHop +,CG14073 - chr3L 18821127 intergenic HipHop +,CG14073 - chr3L_30_18820001 chr3L_18820001 RAL-306_125b 2242 chr3L 18853956 18854023 chr3L 18854107 18854174 19 151 6.5 6.0 6.2 2.6 218 chr3L 18853956 intergenic CR45387 + chr3L 18854065 intergenic CR45387 + chr3L 18854174 intergenic CR45387 + chr3L_19_18850001 chr3L_18850001 RAL-306_125b 2243 chr3L 18868918 18868976 chr3L 18869070 18869128 28 152 7.0 9.0 8.0 3.1 210 chr3L 18868918 3` UTR Dysb + chr3L 18869023 3` UTR Dysb + chr3L 18869128 3` UTR Dysb + chr3L_28_18865001 chr3L_18865001 RAL-306_125b 2244 chr3L 18885955 18886013 chr3L 18886081 18886139 22 125 1.0 14.0 7.5 2.6 184 chr3L 18885955 intron CG3961 - chr3L 18886047 intron CG3961 - chr3L 18886139 intron CG3961 - chr3L_22_18885001 chr3L_18885001 RAL-306_125b 2245 chr3L 18887254 18887323 chr3L 18887410 18887479 13 156 8.5 8.5 8.5 1.4 225 chr3L 18887254 intron CG3961 - chr3L 18887366 intron CG3961 - chr3L 18887479 intron CG3961 - chr3L_13_18885001 chr3L_18885001 RAL-306_125b 2246 chr3L 18888210 18888217 chr3L 18888345 18888352 4 135 21.0 10.0 15.5 0.2 142 chr3L 18888210 intron CG3961 - chr3L 18888281 intron CG3961 - chr3L 18888352 intron CG3961 - chr3L_4_18885001 chr3L_18885001 RAL-306_125b 2247 chr3L 18888220 18888285 chr3L 18888344 18888419 27 132 8.0 10.0 9.0 2.7 199 chr3L 18888220 intron CG3961 - chr3L 18888320 intron CG3961 - chr3L 18888419 intron CG3961 - chr3L_27_18885001 chr3L_18885001 RAL-306_125b 2248 chr3L 18897136 18897202 chr3L 18897269 18897335 21 133 1.0 5.0 3.0 5.2 199 chr3L 18897136 intron CG3902 - chr3L 18897236 intron CG3902 - chr3L 18897335 intron CG3902 - chr3L_21_18895001 chr3L_18895001 RAL-306_125b 2249 chr3L 18924429 18924509 chr3L 18924555 18924635 25 125 5.5 6.5 6.0 3.6 206 chr3L 18924429 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924635 intron CG32204 - chr3L_25_18920001 chr3L_18920001 RAL-306_125b 2250 chr3L 18933583 18933660 chr3L 18933727 18933803 25 142 6.0 9.0 7.5 2.9 220 chr3L 18933583 intron CG32204 - chr3L 18933693 intron CG32204 - chr3L 18933803 intron CG32204 - chr3L_25_18930001 chr3L_18930001 RAL-306_125b 2251 chr3L 18935785 18935861 chr3L 18935924 18936000 35 138 7.0 8.0 7.5 4.1 215 chr3L 18935785 intron CG32204 - chr3L 18935892 intron CG32204 - chr3L 18936000 intron CG32204 - chr3L_35_18935001 chr3L_18935001 RAL-306_125b 2252 chr3L 18944907 18944922 chr3L 18945032 18945046 6 126 12.0 15.5 13.8 0.4 139 chr3L 18944907 intron CG32204 - chr3L 18944976 intron CG32204 - chr3L 18945046 intron CG32204 - chr3L_6_18940001 chr3L_18940001 RAL-306_125b 2253 chr3L 18944925 18944937 chr3L 18945031 18945063 6 123 9.0 15.5 12.2 0.5 138 chr3L 18944925 intron CG32204 - chr3L 18944994 intron CG32204 - chr3L 18945063 intron CG32204 - chr3L_6_18940001 chr3L_18940001 RAL-306_125b 2254 chr3L 18969551 18969621 chr3L 18969697 18969767 26 144 6.5 8.0 7.2 3.2 216 chr3L 18969551 intergenic not near genes chr3L 18969659 intergenic not near genes chr3L 18969767 intergenic not near genes chr3L_26_18965001 chr3L_18965001 RAL-306_125b 2255 chr3L 19008796 19008866 chr3L 19009187 19009254 jockey 20 388 6.0 7.5 6.8 2.6 458 chr3L 19008796 intron nkd - chr3L 19009025 intron nkd - chr3L 19009254 intron nkd - chr3L_20_19005001 chr3L_19005001 RAL-306_125b 2256 chr3L 19015159 19015215 chr3L 19015287 19015345 14 132 0.5 7.0 3.8 2.9 186 chr3L 19015159 intron nkd - chr3L 19015252 intron nkd - chr3L 19015345 intron nkd - chr3L_14_19015001 chr3L_19015001 RAL-306_125b 2257 chr3L 19114152 19114229 chr3L 19114313 19114341 28 155 7.0 5.5 6.2 3.9 189 chr3L 19114152 intron CG14082 - chr3L 19114246 intron CG14082 - chr3L 19114341 intron CG14082 - chr3L_28_19110001 chr3L_19110001 RAL-306_125b 2258 chr3L 19116999 19117068 chr3L 19124496 19124565 mdg1 23 7493 8.5 8.0 8.2 2.5 7566 chr3L 19116999 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124565 intron CG14082 - chr3L_23_19120001 chr3L_19120001 RAL-306_125b 2259 chr3L 19127325 19127390 chr3L 19127451 19127473 18 118 4.0 3.0 3.5 4.0 148 chr3L 19127325 intron CG14082 - chr3L 19127399 intron CG14082 - chr3L 19127473 intron CG14082 - chr3L_18_19125001 chr3L_19125001 RAL-306_125b 2260 chr3L 19138109 19138157 chr3L 19138241 19138301 13 138 0.0 7.5 3.8 2.7 192 chr3L 19138109 intron CG14082 - chr3L 19138205 intron CG14082 - chr3L 19138301 intron CG14082 - chr3L_13_19135001 chr3L_19135001 RAL-306_125b 2261 chr3L 19182345 19182415 chr3L 19182471 19182504 15 127 7.5 4.5 6.0 2.1 159 chr3L 19182345 intron fz2 - chr3L 19182424 intron fz2 - chr3L 19182504 intron fz2 - chr3L_15_19180001 chr3L_19180001 RAL-306_125b 2262 chr3L 19190042 19190077 chr3L 19190159 19190204 6 122 10.5 7.5 9.0 0.6 162 chr3L 19190042 intron fz2 - chr3L 19190123 intron fz2 - chr3L 19190204 intron fz2 - chr3L_6_19190001 chr3L_19190001 RAL-306_125b 2263 chr3L 19190080 19190101 chr3L 19190152 19190228 6 114 7.0 7.5 7.2 0.7 148 chr3L 19190080 intron fz2 - chr3L 19190154 intron fz2 - chr3L 19190228 intron fz2 - chr3L_6_19190001 chr3L_19190001 RAL-306_125b 2264 chr3L 19207087 19207161 chr3L 19207866 19207940 36 774 5.0 5.5 5.2 5.8 853 chr3L 19207087 intron fz2 - chr3L 19207514 intron fz2 - chr3L 19207940 intron fz2 - chr3L_36_19205001 chr3L_19205001 RAL-306_125b 2265 chr3L 19208014 19208027 chr3L 19209438 19209451 Doc 7 1423 14.5 9.0 11.8 0.5 1437 chr3L 19208014 intron fz2 - chr3L 19208732 intron fz2 - chr3L 19209451 intron fz2 - chr3L_7_19205001 chr3L_19205001 RAL-306_125b 2266 chr3L 19208028 19208090 chr3L 19209435 19209483 Doc 15 1418 3.5 9.0 6.2 2.1 1455 chr3L 19208028 intron fz2 - chr3L 19208756 intron fz2 - chr3L 19209483 intron fz2 - chr3L_15_19205001 chr3L_19205001 RAL-306_125b 2267 chr3L 19220633 19220637 chr3L 22908066 22908066 35 3687432 24.0 31.0 27.5 1.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_35_21060001 chr3L_21060001 RAL-306_125b 2268 chr3L 19265250 19265328 chr3L 19268459 19268537 16 3214 46.5 41.0 43.8 0.4 3287 chr3L 19265250 3` UTR,exon CG42374 +,CG9666 + chr3L 19266894 exon CG9629 - chr3L 19268537 intron CG9629 - chr3L_16_19265001 chr3L_19265001 RAL-306_125b 2269 chr3L 19398888 19398928 chr3L 19403655 19403694 F-element 17 4767 6.5 5.5 6.0 2.4 4806 chr3L 19398888 intron CG32206 - chr3L 19401291 intron CG32206 - chr3L 19403694 intron CG32206 - chr3L_17_19400001 chr3L_19400001 RAL-306_125b 2270 chr3L 19404934 19405000 chr3L 19405061 19405126 23 126 5.0 8.0 6.5 3.1 192 chr3L 19404934 intron CG32206 - chr3L 19405030 intron CG32206 - chr3L 19405126 intron CG32206 - chr3L_23_19405001 chr3L_19405001 RAL-306_125b 2271 chr3L 19437012 19437048 chr3L 19437146 19437182 6 134 7.0 11.5 9.2 0.6 170 chr3L 19437012 intergenic not near genes chr3L 19437097 intergenic not near genes chr3L 19437182 intergenic not near genes chr3L_6_19435001 chr3L_19435001 RAL-306_125b 2272 chr3L 19439217 19439288 chr3L 19439356 19439424 16 138 5.5 8.0 6.8 2.1 207 chr3L 19439217 intergenic not near genes chr3L 19439320 intergenic not near genes chr3L 19439424 intergenic not near genes chr3L_16_19435001 chr3L_19435001 RAL-306_125b 2273 chr3L 19479300 19479376 chr3L 19479428 19479504 26 123 8.0 4.5 6.2 3.6 204 chr3L 19479300 intergenic not near genes chr3L 19479402 intergenic not near genes chr3L 19479504 intergenic not near genes chr3L_26_19475001 chr3L_19475001 RAL-306_125b 2274 chr3L 19480626 19480681 chr3L 19480778 19480833 15 150 7.0 12.0 9.5 1.4 207 chr3L 19480626 intergenic not near genes chr3L 19480730 intergenic not near genes chr3L 19480833 intergenic not near genes chr3L_15_19480001 chr3L_19480001 RAL-306_125b 2275 chr3L 19493854 19493926 chr3L 19494262 19494334 13 408 5.0 8.0 6.5 1.7 480 chr3L 19493854 intron CG9449 - chr3L 19494094 intron CG9449 - chr3L 19494334 intron CG9449 - chr3L_13_19490001 chr3L_19490001 RAL-306_125b 2276 chr3L 19517085 19517159 chr3L 19517234 19517308 20 147 6.5 3.5 5.0 3.3 223 chr3L 19517085 intergenic Cpr76Ba - chr3L 19517196 intergenic Cpr76Ba - chr3L 19517308 intergenic Cpr76Ba - chr3L_20_19515001 chr3L_19515001 RAL-306_125b 2277 chr3L 19703806 19703877 chr3L 19704010 19704081 19 202 8.5 10.5 9.5 1.8 275 chr3L 19703806 intron serp - chr3L 19703944 intron serp - chr3L 19704081 intron serp - chr3L_19_19700001 chr3L_19700001 RAL-306_125b 2278 chr3L 19820269 19820314 chr3L 19827858 19827913 412 12 7595 4.5 5.0 4.8 2.1 7644 chr3L 19820269 intron Deaf1 + chr3L 19824091 intron Deaf1 + chr3L 19827913 intron Deaf1 + chr3L_12_19820001 chr3L_19820001 RAL-306_125b 2279 chr3L 19848466 19848523 chr3L 19857706 19857743 roo 18 9238 15.0 14.5 14.8 1.1 9277 chr3L 19848466 intron Papss + chr3L 19853104 intron Papss + chr3L 19857743 intron Papss + chr3L_18_19850001 chr3L_19850001 RAL-306_125b 2280 chr3L 19861770 19861849 chr3L 19863608 19863687 S-element 22 1837 7.5 5.0 6.2 3.1 1917 chr3L 19861770 5` UTR CR45433 + chr3L 19862728 intergenic not near genes chr3L 19863687 intergenic not near genes chr3L_22_19860001 chr3L_19860001 RAL-306_125b 2281 chr3L 19899846 19899894 chr3L 19899993 19900041 19 145 11.0 9.0 10.0 1.7 195 chr3L 19899846 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899944 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900041 intron,intron Mi-2 -,Su(Tpl) - chr3L_19_19895001 chr3L_19895001 RAL-306_125b 2282 chr3L 19899895 19899906 chr3L 19899992 19900053 8 141 9.5 9.0 9.2 0.8 158 chr3L 19899895 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899974 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900053 intron,intron Mi-2 -,Su(Tpl) - chr3L_8_19895001 chr3L_19895001 RAL-306_125b 2283 chr3L 19905142 19905194 chr3L 19905509 19905573 16 375 12.0 0.0 6.0 2.3 431 chr3L 19905142 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905358 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905573 intron,intron Mi-2 -,Su(Tpl) - chr3L_16_19905001 chr3L_19905001 RAL-306_125b 2284 chr3L 19925347 19925363 chr3L 19925532 19925548 5 185 17.5 7.5 12.5 0.4 201 chr3L 19925347 intron Grasp65 + chr3L 19925448 intron Grasp65 + chr3L 19925548 exon Grasp65 + chr3L_5_19925001 chr3L_19925001 RAL-306_125b 2285 chr3L 19925366 19925416 chr3L 19925525 19925601 13 178 7.0 6.0 6.5 1.7 235 chr3L 19925366 intron Grasp65 + chr3L 19925484 intron Grasp65 + chr3L 19925601 exon Grasp65 + chr3L_13_19925001 chr3L_19925001 RAL-306_125b 2286 chr3L 19933488 19933561 chr3L 19934360 19934419 30 868 4.0 4.0 4.0 6.0 931 chr3L 19933488 intergenic CR45678 + chr3L 19933954 5` UTR CR45678 + chr3L 19934419 intergenic CR45678 + chr3L_30_19930001 chr3L_19930001 RAL-306_125b 2287 chr3L 19962921 19962963 chr3L 19963036 19963090 17 123 3.5 9.0 6.2 2.4 169 chr3L 19962921 intron Ac76E + chr3L 19963006 intron Ac76E + chr3L 19963090 intron Ac76E + chr3L_17_19960001 chr3L_19960001 RAL-306_125b 2288 chr3L 19981163 19981230 chr3L 19981293 19981360 28 130 3.5 4.5 4.0 5.6 197 chr3L 19981163 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981360 intergenic CG17732 + chr3L_28_19980001 chr3L_19980001 RAL-306_125b 2289 chr3L 19992063 19992109 chr3L 19992190 19992236 13 126 10.5 11.5 11.0 1.1 173 chr3L 19992063 intron,intron CG7646 +,Nca + chr3L 19992150 intron,intron CG7646 +,Nca + chr3L 19992236 intron,intron CG7646 +,Nca + chr3L_13_19990001 chr3L_19990001 RAL-306_125b 2290 chr3L 20038778 20038832 chr3L 20039000 20039060 17 224 12.0 9.0 10.5 1.5 282 chr3L 20038778 intergenic not near genes chr3L 20038919 intergenic not near genes chr3L 20039060 intergenic not near genes chr3L_17_20035001 chr3L_20035001 RAL-306_125b 2291 chr3L 20044921 20044943 chr3L 20045192 20045194 6 265 5.0 19.0 12.0 0.5 273 chr3L 20044921 intergenic not near genes chr3L 20045058 intergenic not near genes chr3L 20045194 intergenic not near genes chr3L_6_20045001 chr3L_20045001 RAL-306_125b 2292 chr3L 20057513 20057588 chr3L 20057676 20057751 21 162 5.5 8.0 6.8 2.7 238 chr3L 20057513 intergenic not near genes chr3L 20057632 intergenic not near genes chr3L 20057751 intergenic not near genes chr3L_21_20055001 chr3L_20055001 RAL-306_125b 2293 chr3L 20081695 20081702 chr3L 20081828 20081835 5 133 20.5 9.0 14.8 0.3 140 chr3L 20081695 intron sNPF-R - chr3L 20081765 intron sNPF-R - chr3L 20081835 intron sNPF-R - chr3L_5_20080001 chr3L_20080001 RAL-306_125b 2294 chr3L 20081703 20081766 chr3L 20081825 20081899 33 133 7.5 8.0 7.8 3.7 196 chr3L 20081703 intron sNPF-R - chr3L 20081801 intron sNPF-R - chr3L 20081899 intron sNPF-R - chr3L_33_20080001 chr3L_20080001 RAL-306_125b 2295 chr3L 20096038 20096102 chr3L 20096192 20096242 9 151 4.5 0.0 2.2 2.8 204 chr3L 20096038 intergenic not near genes chr3L 20096140 intergenic not near genes chr3L 20096242 intergenic not near genes chr3L_9_20095001 chr3L_20095001 RAL-306_125b 2296 chr3L 20113436 20113505 chr3L 20113581 20113650 24 145 6.5 9.5 8.0 2.7 214 chr3L 20113436 intergenic not near genes chr3L 20113543 intergenic not near genes chr3L 20113650 intergenic not near genes chr3L_24_20110001 chr3L_20110001 RAL-306_125b 2297 chr3L 20113613 20113681 chr3L 20122920 20122965 roo 22 9305 9.5 8.0 8.8 2.2 9352 chr3L 20113613 intergenic not near genes chr3L 20118289 intergenic not near genes chr3L 20122965 intergenic not near genes chr3L_22_20115001 chr3L_20115001 RAL-306_125b 2298 chr3L 20143041 20143054 chr3L 20143171 20143173 6 128 11.5 9.5 10.5 0.5 132 chr3L 20143041 intergenic not near genes chr3L 20143107 intergenic not near genes chr3L 20143173 intergenic not near genes chr3L_6_20140001 chr3L_20140001 RAL-306_125b 2299 chr3L 20143059 20143106 chr3L 20143166 20143236 19 129 11.5 9.0 10.2 1.7 177 chr3L 20143059 intergenic not near genes chr3L 20143148 intergenic not near genes chr3L 20143236 intergenic not near genes chr3L_19_20140001 chr3L_20140001 RAL-306_125b 2300 chr3L 20189924 20189993 chr3L 20190078 20190147 22 153 9.5 9.0 9.2 2.2 223 chr3L 20189924 intron CG42674 - chr3L 20190036 intron CG42674 - chr3L 20190147 intron CG42674 - chr3L_22_20190001 chr3L_20190001 RAL-306_125b 2301 chr3L 20212561 20212585 chr3L 20218188 20218212 mdg3 11 5626 17.5 6.0 11.8 0.9 5651 chr3L 20212561 intergenic CG7017 - chr3L 20215386 intergenic not near genes chr3L 20218212 intergenic CG6933 - chr3L_11_20215001 chr3L_20215001 RAL-306_125b 2302 chr3L 20257283 20257343 chr3L 20258452 20258513 pogo 19 1169 11.5 6.5 9.0 1.9 1230 chr3L 20257283 intron rdgC + chr3L 20257898 intron rdgC + chr3L 20258513 intron rdgC + chr3L_19_20255001 chr3L_20255001 RAL-306_125b 2303 chr3L 20315609 20315669 chr3L 20315739 20315799 15 127 6.0 5.5 5.8 2.2 190 chr3L 20315609 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315704 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315799 3` UTR,intron alphaSnap +,CR43875 - chr3L_15_20315001 chr3L_20315001 RAL-306_125b 2304 chr3L 20321111 20321121 chr3L 20342869 20342877 17.6 5 21756 14.0 34.5 24.2 0.2 21766 chr3L 20321111 exon Spn77Bb + chr3L 20331994 intergenic not near genes chr3L 20342877 exon Spn77Bc + chr3L_5_20330001 chr3L_20330001 RAL-306_125b 2305 chr3L 20344245 20344257 chr3L 20344385 20344397 INE-1 5 140 12.5 16.0 14.2 0.3 152 chr3L 20344245 3` UTR Spn77Bc + chr3L 20344321 intergenic Spn77Bc + chr3L 20344397 intergenic Spn77Bc + chr3L_5_20340001 chr3L_20340001 RAL-306_125b 2306 chr3L 20386896 20386964 chr3L 20387048 20387116 29 151 9.0 8.0 8.5 3.1 220 chr3L 20386896 intron fbl + chr3L 20387006 intron fbl + chr3L 20387116 intron fbl + chr3L_29_20385001 chr3L_20385001 RAL-306_125b 2307 chr3L 20462536 20462581 chr3L 20462667 20462698 13 129 15.5 0.0 7.8 1.5 162 chr3L 20462536 intron atk - chr3L 20462617 intron atk - chr3L 20462698 intron atk - chr3L_13_20460001 chr3L_20460001 RAL-306_125b 2308 chr3L 20476713 20476772 chr3L 20484362 20484421 springer 35 7648 13.0 9.0 11.0 2.9 7708 chr3L 20476713 3` UTR isoQC + chr3L 20480567 intergenic not near genes chr3L 20484421 3` UTR ZnT77C - chr3L_35_20480001 chr3L_20480001 RAL-306_125b 2309 chr3L 20525228 20525228 chr3L 22908066 22908067 6 2382838 27.5 31.0 29.2 0.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-306_125b 2310 chr3L 20525229 20525229 chr3L 22908066 22908067 11 2382838 27.5 31.0 29.2 0.4 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_11_21715001 chr3L_21715001 RAL-306_125b 2311 chr3L 20525229 20525229 chr3L 24821492 24821494 9 4296264 27.5 17.5 22.5 0.4 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_9_22670001 chr3L_22670001 RAL-306_125b 2312 chr3L 20525230 20525230 chr3L 22908066 22908067 7 2382837 28.0 31.0 29.5 0.2 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-306_125b 2313 chr3L 20525230 20525230 chr3L 24821493 24821494 4 4296264 28.0 17.5 22.8 0.2 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-306_125b 2314 chr3L 20590023 20590080 chr3L 20590612 20590667 412 17 581 2.5 8.5 5.5 2.6 644 chr3L 20590023 intergenic not near genes chr3L 20590345 intergenic not near genes chr3L 20590667 intergenic not near genes chr3L_17_20590001 chr3L_20590001 RAL-306_125b 2315 chr3L 20710717 20710786 chr3L 20710844 20710904 18 124 10.0 7.5 8.8 1.8 187 chr3L 20710717 intergenic not near genes chr3L 20710810 intergenic not near genes chr3L 20710904 intergenic not near genes chr3L_18_20710001 chr3L_20710001 RAL-306_125b 2316 chr3L 20907818 20907891 chr3L 20907950 20908025 22 131 8.0 6.0 7.0 2.8 207 chr3L 20907818 intergenic not near genes chr3L 20907922 intergenic not near genes chr3L 20908025 intergenic not near genes chr3L_22_20905001 chr3L_20905001 RAL-306_125b 2317 chr3L 20945311 20945337 chr3L 20945446 20945472 8 132 16.5 10.0 13.2 0.6 161 chr3L 20945311 intron fng - chr3L 20945392 intron fng - chr3L 20945472 intron fng - chr3L_8_20945001 chr3L_20945001 RAL-306_125b 2318 chr3L 21014917 21014946 chr3L 21023401 21023472 Tirant 7 8511 5.5 6.0 5.8 1.0 8555 chr3L 21014917 intron skd - chr3L 21019194 intron skd - chr3L 21023472 intron skd - chr3L_7_21015001 chr3L_21015001 RAL-306_125b 2319 chr3L 21062413 21062484 chr3L 21062559 21062630 21 143 10.5 8.0 9.2 2.1 217 chr3L 21062413 intron siz + chr3L 21062522 intron siz + chr3L 21062630 intron siz + chr3L_21_21060001 chr3L_21060001 RAL-306_125b 2320 chr3L 21082165 21082228 chr3L 21082293 21082356 20 127 9.0 8.5 8.8 2.0 191 chr3L 21082165 intron ko - chr3L 21082260 intron ko - chr3L 21082356 intron ko - chr3L_20_21080001 chr3L_21080001 RAL-306_125b 2321 chr3L 21145265 21145288 chr3L 21145395 21145411 8 129 13.0 5.0 9.0 0.8 146 chr3L 21145265 intron Ac78C - chr3L 21145338 intron Ac78C - chr3L 21145411 intron Ac78C - chr3L_8_21145001 chr3L_21145001 RAL-306_125b 2322 chr3L 21151827 21151882 chr3L 21156959 21157012 flea 24 5134 7.5 12.5 10.0 2.2 5185 chr3L 21151827 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21157012 intron Ac78C - chr3L_24_21150001 chr3L_21150001 RAL-306_125b 2323 chr3L 21160921 21160986 chr3L 21161067 21161125 24 141 8.0 6.0 7.0 3.0 204 chr3L 21160921 5` UTR Ac78C - chr3L 21161023 intron Ac78C - chr3L 21161125 intron Ac78C - chr3L_24_21160001 chr3L_21160001 RAL-306_125b 2324 chr3L 21243703 21243743 chr3L 21251311 21251320 412 4 7592 7.5 10.0 8.8 0.4 7617 chr3L 21243703 intron Eip78C + chr3L 21247512 intron Eip78C + chr3L 21251320 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-306_125b 2325 chr3L 21256502 21256556 chr3L 21256636 21256700 23 134 9.0 9.5 9.2 2.3 198 chr3L 21256502 intron Eip78C + chr3L 21256601 intron Eip78C + chr3L 21256700 intron Eip78C + chr3L_23_21255001 chr3L_21255001 RAL-306_125b 2326 chr3L 21306107 21306174 chr3L 21315310 21315379 roo 27 9208 8.0 12.0 10.0 2.5 9272 chr3L 21306107 3` UTR CG7632 + chr3L 21310743 intron Pc - chr3L 21315379 3` UTR Pc - chr3L_27_21310001 chr3L_21310001 RAL-306_125b 2327 chr3L 21319485 21319549 chr3L 21319625 21319689 22 140 4.5 5.5 5.0 3.7 204 chr3L 21319485 5` UTR Rab26 + chr3L 21319587 5` UTR Rab26 + chr3L 21319689 5` UTR Rab26 + chr3L_22_21315001 chr3L_21315001 RAL-306_125b 2328 chr3L 21361676 21361751 chr3L 21362680 21362755 G2 17 1003 7.5 8.0 7.8 1.9 1079 chr3L 21361676 intergenic CG32440 + chr3L 21362216 intergenic not near genes chr3L 21362755 intergenic not near genes chr3L_17_21360001 chr3L_21360001 RAL-306_125b 2329 chr3L 21372676 21372747 chr3L 21379234 21379304 McClintock 21 6554 8.5 8.0 8.2 2.3 6628 chr3L 21372676 intergenic not near genes chr3L 21375990 intergenic not near genes chr3L 21379304 intergenic not near genes chr3L_21_21375001 chr3L_21375001 RAL-306_125b 2330 chr3L 21406963 21407019 chr3L 21407087 21407148 22 124 8.5 7.5 8.0 2.4 185 chr3L 21406963 intron rgn + chr3L 21407056 intron rgn + chr3L 21407148 intron rgn + chr3L_22_21405001 chr3L_21405001 RAL-306_125b 2331 chr3L 21415094 21415164 chr3L 21415221 21415297 25 131 4.0 4.5 4.2 4.8 203 chr3L 21415094 intron rgn + chr3L 21415196 intron rgn + chr3L 21415297 intron rgn + chr3L_25_21415001 chr3L_21415001 RAL-306_125b 2332 chr3L 21415485 21415546 chr3L 21415613 21415674 25 128 8.5 7.0 7.8 2.8 189 chr3L 21415485 intron rgn + chr3L 21415580 intron rgn + chr3L 21415674 intron rgn + chr3L_25_21415001 chr3L_21415001 RAL-306_125b 2333 chr3L 21417788 21417863 chr3L 21417919 21417990 33 130 8.5 7.0 7.8 3.7 202 chr3L 21417788 intron rgn + chr3L 21417889 intron rgn + chr3L 21417990 intron rgn + chr3L_33_21415001 chr3L_21415001 RAL-306_125b 2334 chr3L 4341332 4341332 chr3L 21448027 21448027 5 17106695 43.0 31.5 37.2 0.1 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-306_125b 2335 chr3L 21458530 21458559 chr3L 21458695 21458719 9 161 10.0 7.0 8.5 0.9 189 chr3L 21458530 intergenic not near genes chr3L 21458624 intergenic not near genes chr3L 21458719 intergenic not near genes chr3L_9_21455001 chr3L_21455001 RAL-306_125b 2336 chr3L 21576133 21576156 chr3L 21576266 21576267 4 128 17.5 16.5 17.0 0.2 134 chr3L 21576133 3` UTR CR43939 - chr3L 21576200 3` UTR CR43939 - chr3L 21576267 3` UTR CR43939 - chr3L_4_21575001 chr3L_21575001 RAL-306_125b 2337 chr3L 21576160 21576170 chr3L 21576261 21576303 8 125 12.5 16.0 14.2 0.5 143 chr3L 21576160 3` UTR CR43939 - chr3L 21576232 3` UTR CR43939 - chr3L 21576303 3` UTR CR43939 - chr3L_8_21575001 chr3L_21575001 RAL-306_125b 2338 chr3L 21576171 21576203 chr3L 21576259 21576320 15 121 7.0 16.0 11.5 1.2 149 chr3L 21576171 3` UTR CR43939 - chr3L 21576246 3` UTR CR43939 - chr3L 21576320 3` UTR CR43939 - chr3L_15_21575001 chr3L_21575001 RAL-306_125b 2339 chr3L 21599731 21599807 chr3L 21599910 21599986 19 179 4.5 5.5 5.0 3.2 255 chr3L 21599731 intron TfAP-2 + chr3L 21599858 intron TfAP-2 + chr3L 21599986 intron TfAP-2 + chr3L_19_21595001 chr3L_21595001 RAL-306_125b 2340 chr3L 21656955 21656993 chr3L 21657093 21657136 14 143 8.5 8.5 8.5 1.5 181 chr3L 21656955 intron CG43980 + chr3L 21657046 intron CG43980 + chr3L 21657136 intron CG43980 + chr3L_14_21655001 chr3L_21655001 RAL-306_125b 2341 chr3L 21656998 21657019 chr3L 21657089 21657162 12 135 5.5 8.5 7.0 1.5 164 chr3L 21656998 intron CG43980 + chr3L 21657080 intron CG43980 + chr3L 21657162 intron CG43980 + chr3L_12_21655001 chr3L_21655001 RAL-306_125b 2342 chr3L 21692876 21692940 chr3L 21693095 21693161 34 219 6.5 5.5 6.0 4.9 285 chr3L 21692876 3` UTR CG32447 - chr3L 21693018 3` UTR CG32447 - chr3L 21693161 3` UTR CG32447 - chr3L_34_21690001 chr3L_21690001 RAL-306_125b 2343 chr3L 21749270 21749333 chr3L 21754480 21754543 Doc 17 5205 7.5 9.5 8.5 1.8 5273 chr3L 21749270 intron Syn1 - chr3L 21751906 intron Syn1 - chr3L 21754543 intron Syn1 - chr3L_17_21750001 chr3L_21750001 RAL-306_125b 2344 chr3L 21769995 21770015 chr3L 21770132 21770152 8 135 9.5 7.0 8.2 0.9 157 chr3L 21769995 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770074 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770152 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_8_21770001 chr3L_21770001 RAL-306_125b 2345 chr3L 21770021 21770040 chr3L 21770130 21770177 13 133 6.0 7.0 6.5 1.7 156 chr3L 21770021 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770099 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770177 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_13_21770001 chr3L_21770001 RAL-306_125b 2346 chr3L 21776625 21776685 chr3L 21776758 21776822 10 134 0.0 5.0 2.5 2.9 197 chr3L 21776625 intron,intron CG42689 +,CG42552 + chr3L 21776724 intron,intron CG42689 +,CG42552 + chr3L 21776822 intron,intron CG42689 +,CG42552 + chr3L_10_21775001 chr3L_21775001 RAL-306_125b 2347 chr3L 21788595 21788669 chr3L 21788866 21788940 20 270 6.5 7.5 7.0 2.5 345 chr3L 21788595 intergenic not near genes chr3L 21788768 intergenic not near genes chr3L 21788940 intergenic not near genes chr3L_20_21785001 chr3L_21785001 RAL-306_125b 2348 chr3L 21809924 21809964 chr3L 21810071 21810116 13 147 11.5 13.5 12.5 1.0 192 chr3L 21809924 intron eg + chr3L 21810020 intron eg + chr3L 21810116 intron eg + chr3L_13_21810001 chr3L_21810001 RAL-306_125b 2349 chr3L 21852211 21852283 chr3L 21852354 21852426 22 128 4.5 4.0 4.2 4.2 215 chr3L 21852211 intron mub + chr3L 21852318 intron mub + chr3L 21852426 intron mub + chr3L_22_21850001 chr3L_21850001 RAL-306_125b 2350 chr3L 21869411 21869484 chr3L 21869541 21869581 23 124 4.0 3.0 3.5 5.1 170 chr3L 21869411 intron mub + chr3L 21869496 intron mub + chr3L 21869581 intron mub + chr3L_23_21865001 chr3L_21865001 RAL-306_125b 2351 chr3L 22094231 22094298 chr3L 22094378 22094445 18 147 11.0 9.5 10.2 1.6 214 chr3L 22094231 intergenic not near genes chr3L 22094338 intergenic not near genes chr3L 22094445 intergenic not near genes chr3L_18_22090001 chr3L_22090001 RAL-306_125b 2352 chr3L 22099633 22099696 chr3L 22105869 22105931 3S18 24 6235 4.0 9.0 6.5 3.2 6298 chr3L 22099633 intergenic not near genes chr3L 22102782 intergenic not near genes chr3L 22105931 intergenic not near genes chr3L_24_22100001 chr3L_22100001 RAL-306_125b 2353 chr3L 22130453 22130511 chr3L 22130649 22130701 20 191 8.0 4.0 6.0 2.9 248 chr3L 22130453 intergenic not near genes chr3L 22130577 intergenic not near genes chr3L 22130701 intergenic not near genes chr3L_20_22130001 chr3L_22130001 RAL-306_125b 2354 chr3L 22169406 22169477 chr3L 22169549 22169556 21 139 10.0 7.0 8.5 2.2 150 chr3L 22169406 intron olf413 + chr3L 22169481 intron olf413 + chr3L 22169556 intron olf413 + chr3L_21_22165001 chr3L_22165001 RAL-306_125b 2355 chr3L 22179084 22179117 chr3L 22179220 22179230 11 127 4.0 6.0 5.0 1.8 146 chr3L 22179084 intron olf413 + chr3L 22179157 intron olf413 + chr3L 22179230 intron olf413 + chr3L_11_22175001 chr3L_22175001 RAL-306_125b 2356 chr3L 22328049 22328085 chr3L 22328169 22328214 7 141 2.0 4.0 3.0 1.8 165 chr3L 22328049 intron Ten-m - chr3L 22328132 intron Ten-m - chr3L 22328214 intron Ten-m - chr3L_7_22325001 chr3L_22325001 RAL-306_125b 2357 chr3L 22366679 22366733 chr3L 22366795 22366861 18 127 8.0 6.5 7.2 2.2 182 chr3L 22366679 intron Ten-m - chr3L 22366770 intron Ten-m - chr3L 22366861 intron Ten-m - chr3L_18_22365001 chr3L_22365001 RAL-306_125b 2358 chr3L 22411351 22411395 chr3L 22411462 22411517 5 120 1.0 6.0 3.5 1.1 166 chr3L 22411351 intergenic not near genes chr3L 22411434 intergenic not near genes chr3L 22411517 intergenic not near genes chr3L_5_22410001 chr3L_22410001 RAL-306_125b 2359 chr3L 22447155 22447226 chr3L 22447296 22447367 20 140 7.0 15.0 11.0 1.7 212 chr3L 22447155 intergenic not near genes chr3L 22447261 intergenic not near genes chr3L 22447367 intergenic not near genes chr3L_20_22445001 chr3L_22445001 RAL-306_125b 2360 chr3L 22522651 22522727 chr3L 22522778 22522834 21 126 6.0 4.0 5.0 3.5 183 chr3L 22522651 intergenic not near genes chr3L 22522742 intergenic not near genes chr3L 22522834 intergenic not near genes chr3L_21_22520001 chr3L_22520001 RAL-306_125b 2361 chr3L 22554392 22554432 chr3L 22554509 22554558 17 122 3.5 6.5 5.0 2.8 166 chr3L 22554392 intergenic not near genes chr3L 22554475 intergenic not near genes chr3L 22554558 intergenic not near genes chr3L_17_22550001 chr3L_22550001 RAL-306_125b 2362 chr3L 22555726 22555796 chr3L 22563243 22563316 blood 20 7514 4.5 4.5 4.5 3.6 7590 chr3L 22555726 intergenic not near genes chr3L 22559521 intergenic not near genes chr3L 22563316 intergenic not near genes chr3L_20_22555001 chr3L_22555001 RAL-306_125b 2363 chr3L 22569534 22569594 chr3L 22569682 22569742 13 145 8.0 7.0 7.5 1.5 208 chr3L 22569534 intergenic not near genes chr3L 22569638 intergenic not near genes chr3L 22569742 intergenic not near genes chr3L_13_22565001 chr3L_22565001 RAL-306_125b 2364 chr3L 22577588 22577647 chr3L 22582414 22582460 Doc 13 4831 2.0 10.0 6.0 1.9 4872 chr3L 22577588 intergenic not near genes chr3L 22580024 intergenic not near genes chr3L 22582460 3` UTR CG14459 - chr3L_13_22580001 chr3L_22580001 RAL-306_125b 2365 chr3L 22617150 22617213 chr3L 22624652 22624704 blood 15 7501 6.0 10.5 8.2 1.6 7554 chr3L 22617150 intron CG14459 - chr3L 22620927 intron CG14459 - chr3L 22624704 intron CG14459 - chr3L_15_22620001 chr3L_22620001 RAL-306_125b 2366 chr3L 22678034 22678044 chr3L 22678177 22678179 5 141 12.5 2.5 7.5 0.6 145 chr3L 22678034 intron CG14457 + chr3L 22678106 intron CG14457 + chr3L 22678179 intron CG14457 + chr3L_5_22675001 chr3L_22675001 RAL-306_125b 2367 chr3L 22678070 22678104 chr3L 22678171 22678181 11 129 3.5 2.0 2.8 2.9 111 chr3L 22678070 intron CG14457 + chr3L 22678126 intron CG14457 + chr3L 22678181 intron CG14457 + chr3L_11_22675001 chr3L_22675001 RAL-306_125b 2368 chr3L 22731841 22731877 chr3L 22731971 22732007 9 129 9.0 12.5 10.8 0.8 166 chr3L 22731841 intron CG11367 + chr3L 22731924 intron CG11367 + chr3L 22732007 intron CG11367 + chr3L_9_22730001 chr3L_22730001 RAL-306_125b 2369 chr3L 22747607 22747648 chr3L 22747736 22747777 12 124 16.0 5.5 10.8 1.0 170 chr3L 22747607 exon CG7369 + chr3L 22747692 exon CG7369 + chr3L 22747777 3` UTR CG7369 + chr3L_12_22745001 chr3L_22745001 RAL-306_125b 2370 chr3L 22761354 22761401 chr3L 22766827 22766885 Ivk 18 5482 5.5 12.0 8.8 1.8 5531 chr3L 22761354 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766885 intron SPoCk + chr3L_18_22760001 chr3L_22760001 RAL-306_125b 2371 chr3L 22849409 22849440 chr3L 22849544 22849575 12 135 8.5 17.0 12.8 0.9 166 chr3L 22849409 intergenic not near genes chr3L 22849492 intergenic not near genes chr3L 22849575 intergenic not near genes chr3L_12_22845001 chr3L_22845001 RAL-306_125b 2372 chr3L 22855284 22855352 chr3L 22855417 22855481 23 133 10.0 9.0 9.5 2.2 197 chr3L 22855284 exon CG32459 - chr3L 22855382 exon CG32459 - chr3L 22855481 exon CG32459 - chr3L_23_22855001 chr3L_22855001 RAL-306_125b 2373 chr3L 22856566 22856638 chr3L 22856902 22856974 25 333 6.5 6.5 6.5 3.3 408 chr3L 22856566 intergenic not near genes chr3L 22856770 intergenic not near genes chr3L 22856974 intergenic not near genes chr3L_25_22855001 chr3L_22855001 RAL-306_125b 2374 chr3L 22865942 22866006 chr3L 22867125 22867171 Doc 37 1181 11.0 11.0 11.0 3.1 1229 chr3L 22865942 exon CG33170 + chr3L 22866556 intron CG33170 + chr3L 22867171 intron CG33170 + chr3L_37_22865001 chr3L_22865001 RAL-306_125b 2375 chr3L 22897179 22897191 chr3L 22897312 22897324 5 133 1.5 15.5 8.5 0.5 145 chr3L 22897179 intergenic not near genes chr3L 22897252 intergenic not near genes chr3L 22897324 intergenic not near genes chr3L_5_22895001 chr3L_22895001 RAL-306_125b 2376 chr3L 22897202 22897224 chr3L 22897289 22897356 4 121 1.0 10.0 5.5 0.6 154 chr3L 22897202 intergenic not near genes chr3L 22897279 intergenic not near genes chr3L 22897356 intergenic not near genes chr3L_4_22895001 chr3L_22895001 RAL-306_125b 2377 chr3L 19220633 19220637 chr3L 22908066 22908066 26 3687432 24.0 31.0 27.5 0.9 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_26_21060001 chr3L_21060001 RAL-306_125b 2378 chr3L 20525228 20525232 chr3L 22908066 22908066 20 2382837 27.5 31.0 29.2 0.7 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_20_21715001 chr3L_21715001 RAL-306_125b 2379 chr3L 19220633 19220637 chr3L 22908067 22908067 22 3687433 24.0 31.5 27.8 0.8 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_22_21060001 chr3L_21060001 RAL-306_125b 2380 chr3L 20525228 20525230 chr3L 22908067 22908067 13 2382838 28.0 31.5 29.8 0.4 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_13_21715001 chr3L_21715001 RAL-306_125b 2381 chr3L 22924904 22924971 chr3L 22925025 22925099 14 123 2.5 3.5 3.0 3.5 195 chr3L 22924904 intergenic not near genes chr3L 22925002 intergenic not near genes chr3L 22925099 intergenic not near genes chr3L_14_22920001 chr3L_22920001 RAL-306_125b 2382 chr3L 22989826 22989878 chr3L 22996850 22996902 297 18 7023 12.0 11.0 11.5 1.4 7076 chr3L 22989826 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996902 intergenic not near genes chr3L_18_22990001 chr3L_22990001 RAL-306_125b 2383 chr3L 23165878 23165907 chr3L 23173371 23173401 Quasimodo 4 7494 14.0 13.5 13.8 0.3 7523 chr3L 23165878 intergenic not near genes chr3L 23169640 intergenic not near genes chr3L 23173401 intergenic not near genes chr3L_4_23165001 chr3L_23165001 RAL-306_125b 2384 chr3L 23875477 23875549 chr3L 23875608 23875680 16 130 8.5 6.0 7.2 2.0 203 chr3L 23875477 intron CG40470 - chr3L 23875578 intron CG40470 - chr3L 23875680 intron CG40470 - chr3L_16_23875001 chr3L_23875001 RAL-306_125b 2385 chr3L 24012368 24012429 chr3L 24020759 24020820 roo 21 8390 6.5 15.0 10.8 1.8 8452 chr3L 24012368 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020820 intergenic not near genes chr3L_21_24015001 chr3L_24015001 RAL-306_125b 2386 chr3L 24168764 24168815 chr3L 24176123 24176152 ZAM 7 7354 5.5 5.5 5.5 1.1 7388 chr3L 24168764 intron Snap25 + chr3L 24172458 intron Snap25 + chr3L 24176152 intron Snap25 + chr3L_7_24170001 chr3L_24170001 RAL-306_125b 2387 chr3L 24791852 24791897 chr3L 24796681 24796701 Doc 10 4825 11.0 4.5 7.8 1.1 4849 chr3L 24791852 intergenic not near genes chr3L 24794276 intergenic not near genes chr3L 24796701 intergenic not near genes chr3L_10_24790001 chr3L_24790001 RAL-306_125b 2388 chr3L 18198930 18198930 chr3L 24821492 24821492 7 6622562 32.5 17.5 25.0 0.3 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-306_125b 2389 chr3L 20525228 20525230 chr3L 24821492 24821492 4 4296263 28.0 17.5 22.8 0.2 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-306_125b 2390 chr3L 18198931 18198931 chr3L 24821493 24821493 13 6622562 32.5 17.5 25.0 0.5 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_13_21510001 chr3L_21510001 RAL-306_125b 2391 chr3L 20525228 20525230 chr3L 24821493 24821493 4 4296264 28.0 17.5 22.8 0.2 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-306_125b 2392 chr3L 24948596 24948597 chr3L 24948740 24948741 4 144 2.5 10.0 6.2 0.6 145 chr3L 24948596 intergenic not near genes chr3L 24948668 intergenic not near genes chr3L 24948741 intergenic not near genes chr3L_4_24945001 chr3L_24945001 RAL-306_125b 2393 chr3L 26290082 26290119 chr3L 26290303 26290340 4 219 8.5 11.5 10.0 0.4 258 chr3L 26290082 intergenic not near genes chr3L 26290211 intergenic not near genes chr3L 26290340 intergenic not near genes chr3L_4_26290001 chr3L_26290001 RAL-306_125b 2394 chr3L 27390433 27390704 chr3L 27390704 27390833 5 156 21.0 25.5 23.2 0.2 400 chr3L 27390433 intron Dbp80 + chr3L 27390633 intron Dbp80 + chr3L 27390833 intron Dbp80 + chr3L_5_27390001 chr3L_27390001 RAL-306_125b 2395 chr3R 1867057 1867168 chr3R 1954889 1954897 Doc3-element 5 87810 7.0 2.5 4.8 0.9 87840 chr3R 1867057 intron CG42623 + chr3R 1910977 intron CG42623 + chr3R 1954897 intergenic not near genes chr3R_5_1910001 chr3R_1910001 RAL-306_125b 2396 chr3R 2424350 2424359 chr3R 8200170 8200179 4 5775820 17.0 21.5 19.2 0.2 5775829 chr3R 2424350 intergenic not near genes chr3R 5312264 intron mtd - chr3R 8200179 intergenic not near genes chr3R_4_5310001 chr3R_5310001 RAL-306_125b 2397 chr3R 2556883 2556954 chr3R 2557566 2557637 17 683 36.5 35.5 36.0 0.5 754 chr3R 2556883 intron CG41056 - chr3R 2557260 intron CG41056 - chr3R 2557637 intron CG41056 - chr3R_17_2555001 chr3R_2555001 RAL-306_125b 2398 chr3R 4063764 4063769 chr3R 4069094 4069099 4 5330 15.5 20.5 18.0 0.2 5335 chr3R 4063764 intergenic not near genes chr3R 4066432 intergenic not near genes chr3R 4069099 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-306_125b 2399 chr3R 4105008 4105055 chr3R 4110247 4110309 copia 13 5250 8.5 7.5 8.0 1.4 5301 chr3R 4105008 intergenic not near genes chr3R 4107658 intergenic not near genes chr3R 4110309 intergenic not near genes chr3R_13_4105001 chr3R_4105001 RAL-306_125b 2400 chr3R 4132852 4132925 chr3R 4133056 4133129 22 203 6.5 3.5 5.0 3.7 277 chr3R 4132852 intron Gfat1 + chr3R 4132990 intron Gfat1 + chr3R 4133129 intron Gfat1 + chr3R_22_4130001 chr3R_4130001 RAL-306_125b 2401 chr3R 4206028 4206085 chr3R 4211653 4211705 mdg3 28 5623 10.0 11.0 10.5 2.4 5677 chr3R 4206028 intron CG14636 - chr3R 4208866 intron CG14636 - chr3R 4211705 intron CG14636 - chr3R_28_4205001 chr3R_4205001 RAL-306_125b 2402 chr3R 4366718 4366782 chr3R 4375151 4375215 roo 29 8430 10.5 9.5 10.0 2.6 8497 chr3R 4366718 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375215 5` UTR CR44922 + chr3R_29_4370001 chr3R_4370001 RAL-306_125b 2403 chr3R 4408378 4408435 chr3R 4412732 4412789 Juan 23 4354 10.0 10.5 10.2 2.1 4411 chr3R 4408378 intron CG32944 - chr3R 4410584 intron CG32944 - chr3R 4412789 intron CG32944 - chr3R_23_4410001 chr3R_4410001 RAL-306_125b 2404 chr3R 4581950 4581972 chr3R 4585286 4585366 28 3340 39.5 61.0 50.2 0.5 3416 chr3R 4581950 intergenic not near genes chr3R 4583658 intergenic not near genes chr3R 4585366 3` UTR CR45558 - chr3R_28_4580001 chr3R_4580001 RAL-306_125b 2405 chr3R 4609505 4609573 chr3R 4610719 4610787 1360 15 1210 5.5 10.0 7.8 1.7 1282 chr3R 4609505 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610787 intergenic not near genes chr3R_15_4610001 chr3R_4610001 RAL-306_125b 2406 chr3R 4657965 4658030 chr3R 4658432 4658497 27 467 8.5 12.5 10.5 2.3 532 chr3R 4657965 3` UTR spartin + chr3R 4658231 intergenic spartin + chr3R 4658497 intergenic not near genes chr3R_27_4655001 chr3R_4655001 RAL-306_125b 2407 chr3R 4722298 4722366 chr3R 4722480 4722553 25 186 9.0 7.0 8.0 2.8 255 chr3R 4722298 intron Nep2 - chr3R 4722426 intron Nep2 - chr3R 4722553 intron Nep2 - chr3R_25_4720001 chr3R_4720001 RAL-306_125b 2408 chr3R 4739076 4739128 chr3R 4739203 4739255 17 123 6.5 11.0 8.8 1.7 179 chr3R 4739076 intron tacc - chr3R 4739166 intron tacc - chr3R 4739255 intron tacc - chr3R_17_4735001 chr3R_4735001 RAL-306_125b 2409 chr3R 4769126 4769187 chr3R 4769253 4769315 18 127 3.5 12.0 7.8 2.0 189 chr3R 4769126 intron,intron atms +,CG44098 - chr3R 4769220 intron,intron atms +,CG44098 - chr3R 4769315 intron,intron atms +,CG44098 - chr3R_18_4765001 chr3R_4765001 RAL-306_125b 2410 chr3R 4887433 4887505 chr3R 4894860 4894912 rover 13 7420 2.5 4.5 3.5 2.9 7479 chr3R 4887433 intergenic not near genes chr3R 4891172 intergenic not near genes chr3R 4894912 intergenic not near genes chr3R_13_4890001 chr3R_4890001 RAL-306_125b 2411 chr3R 4896248 4896315 chr3R 4896391 4896458 20 143 11.5 8.5 10.0 1.8 210 chr3R 4896248 intergenic CR45580 + chr3R 4896353 intergenic CR45580 + chr3R 4896458 5` UTR CR45580 + chr3R_20_4895001 chr3R_4895001 RAL-306_125b 2412 chr3R 4896661 4896719 chr3R 4896789 4896847 15 127 3.0 5.5 4.2 2.9 186 chr3R 4896661 5` UTR CR45580 + chr3R 4896754 5` UTR CR45580 + chr3R 4896847 5` UTR CR45580 + chr3R_15_4895001 chr3R_4895001 RAL-306_125b 2413 chr3R 4948337 4948392 chr3R 4949009 4949064 21 672 42.5 13.5 28.0 0.7 727 chr3R 4948337 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948700 intergenic UbcD6 - chr3R 4949064 3` UTR UbcD6 - chr3R_21_4945001 chr3R_4945001 RAL-306_125b 2414 chr3R 4965957 4966032 chr3R 4966099 4966174 18 137 5.5 4.5 5.0 3.0 217 chr3R 4965957 intron CG1124 + chr3R 4966066 intron CG1124 + chr3R 4966174 intron CG1124 + chr3R_18_4965001 chr3R_4965001 RAL-306_125b 2415 chr3R 4972924 4972941 chr3R 4973088 4973110 jockey 6 168 13.5 13.5 13.5 0.4 186 chr3R 4972924 intergenic not near genes chr3R 4973017 intergenic not near genes chr3R 4973110 intergenic not near genes chr3R_6_4970001 chr3R_4970001 RAL-306_125b 2416 chr3R 5045798 5045871 chr3R 5052950 5053023 HMS-Beagle 26 7152 10.0 9.5 9.8 2.4 7225 chr3R 5045798 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5053023 intergenic CR45588 - chr3R_26_5045001 chr3R_5045001 RAL-306_125b 2417 chr3R 5067941 5068008 chr3R 5073508 5073533 mdg3 25 5564 8.0 11.5 9.8 2.3 5592 chr3R 5067941 intergenic not near genes chr3R 5070737 intergenic not near genes chr3R 5073533 intergenic not near genes chr3R_25_5070001 chr3R_5070001 RAL-306_125b 2418 chr3R 5104341 5104414 chr3R 5104697 5104750 20 351 6.0 7.0 6.5 2.7 409 chr3R 5104341 intergenic not near genes chr3R 5104546 intergenic not near genes chr3R 5104750 intergenic not near genes chr3R_20_5100001 chr3R_5100001 RAL-306_125b 2419 chr3R 5113520 5113567 chr3R 5113647 5113697 19 129 12.0 12.0 12.0 1.5 177 chr3R 5113520 intergenic not near genes chr3R 5113608 intergenic not near genes chr3R 5113697 intergenic not near genes chr3R_19_5110001 chr3R_5110001 RAL-306_125b 2420 chr3R 5162892 5162947 chr3R 5163094 5163149 27 201 10.5 8.0 9.2 2.6 257 chr3R 5162892 intron dpr16 + chr3R 5163020 intron dpr16 + chr3R 5163149 intron dpr16 + chr3R_27_5160001 chr3R_5160001 RAL-306_125b 2421 chr3R 5198925 5198986 chr3R 5199059 5199120 16 132 5.0 6.0 5.5 2.5 195 chr3R 5198925 intron cno - chr3R 5199022 intron cno - chr3R 5199120 intron cno - chr3R_16_5195001 chr3R_5195001 RAL-306_125b 2422 chr3R 5198987 5198990 chr3R 5199057 5199124 5 121 4.5 6.0 5.2 0.8 137 chr3R 5198987 intron cno - chr3R 5199056 intron cno - chr3R 5199124 intron cno - chr3R_5_5195001 chr3R_5195001 RAL-306_125b 2423 chr3R 5255211 5255263 chr3R 5255362 5255393 19 156 3.0 6.5 4.8 3.3 182 chr3R 5255211 exon CG1113 + chr3R 5255302 exon CG1113 + chr3R 5255393 exon CG1113 + chr3R_19_5255001 chr3R_5255001 RAL-306_125b 2424 chr3R 5278041 5278115 chr3R 5278172 5278216 28 127 11.0 8.0 9.5 2.7 175 chr3R 5278041 intron mtd - chr3R 5278128 intron mtd - chr3R 5278216 intron mtd - chr3R_28_5275001 chr3R_5275001 RAL-306_125b 2425 chr3R 5282941 5282990 chr3R 5283072 5283121 11 129 7.5 10.0 8.8 1.1 180 chr3R 5282941 intron mtd - chr3R 5283031 intron mtd - chr3R 5283121 intron mtd - chr3R_11_5280001 chr3R_5280001 RAL-306_125b 2426 chr3R 5437915 5437988 chr3R 5438075 5438148 13 160 10.0 7.5 8.8 1.3 233 chr3R 5437915 intron CG14669 + chr3R 5438032 intron CG14669 + chr3R 5438148 intron CG14669 + chr3R_13_5435001 chr3R_5435001 RAL-306_125b 2427 chr3R 5445929 5445981 chr3R 5452434 5452491 Burdock 16 6509 7.5 11.0 9.2 1.6 6562 chr3R 5445929 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452491 intron CG14669 + chr3R_16_5445001 chr3R_5445001 RAL-306_125b 2428 chr3R 5497052 5497122 chr3R 5497899 5497941 8 823 45.0 37.0 41.0 0.2 889 chr3R 5497052 intron CG31547 - chr3R 5497496 intron CG31547 - chr3R 5497941 intron CG31547 - chr3R_8_5495001 chr3R_5495001 RAL-306_125b 2429 chr3R 5515091 5515166 chr3R 5515218 5515293 28 123 7.5 9.5 8.5 2.9 202 chr3R 5515091 intron Nmdar1 - chr3R 5515192 intron Nmdar1 - chr3R 5515293 intron Nmdar1 - chr3R_28_5515001 chr3R_5515001 RAL-306_125b 2430 chr3R 5726046 5726115 chr3R 5726258 5726327 22 212 9.0 9.5 9.2 2.2 281 chr3R 5726046 intergenic not near genes chr3R 5726186 intergenic not near genes chr3R 5726327 intergenic not near genes chr3R_22_5725001 chr3R_5725001 RAL-306_125b 2431 chr3R 5745977 5746033 chr3R 5746268 5746324 pogo 7 291 7.5 8.5 8.0 0.8 347 chr3R 5745977 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746324 3` UTR Madm + chr3R_7_5745001 chr3R_5745001 RAL-306_125b 2432 chr3R 5746974 5747036 chr3R 5753215 5753277 diver 22 6236 13.0 12.0 12.5 1.6 6303 chr3R 5746974 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753277 intergenic CG2091 - chr3R_22_5750001 chr3R_5750001 RAL-306_125b 2433 chr3R 5772325 5772406 chr3R 5772533 5772614 22 208 7.0 6.0 6.5 2.9 289 chr3R 5772325 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772614 intron CG2082 - chr3R_22_5770001 chr3R_5770001 RAL-306_125b 2434 chr3R 5809072 5809138 chr3R 5809358 5809399 pogo 28 288 4.5 7.0 5.8 4.1 327 chr3R 5809072 3` UTR CG11000 + chr3R 5809236 3` UTR CG11000 + chr3R 5809399 3` UTR CG11000 + chr3R_28_5805001 chr3R_5805001 RAL-306_125b 2435 chr3R 5822343 5822384 chr3R 5823560 5823562 1360 17 1215 13.5 9.5 11.5 1.4 1219 chr3R 5822343 3` UTR CG2023 - chr3R 5822952 3` UTR CG2023 - chr3R 5823562 3` UTR CG2023 - chr3R_17_5820001 chr3R_5820001 RAL-306_125b 2436 chr3R 5822388 5822400 chr3R 5823550 5823617 1360 8 1210 10.0 7.5 8.8 0.8 1229 chr3R 5822388 3` UTR CG2023 - chr3R 5823002 3` UTR CG2023 - chr3R 5823617 3` UTR CG2023 - chr3R_8_5820001 chr3R_5820001 RAL-306_125b 2437 chr3R 5836169 5836175 chr3R 5836302 5836329 4 149 18.5 21.5 20.0 0.2 160 chr3R 5836169 exon,3` UTR CG1208 +,CR45192 - chr3R 5836249 intron CG1208 + chr3R 5836329 intron CG1208 + chr3R_4_5835001 chr3R_5835001 RAL-306_125b 2438 chr3R 5893129 5893135 chr3R 5893351 5893357 4 222 9.0 9.0 9.0 0.4 228 chr3R 5893129 intron CG34113 - chr3R 5893243 intron CG34113 - chr3R 5893357 intron CG34113 - chr3R_4_5890001 chr3R_5890001 RAL-306_125b 2439 chr3R 5893136 5893199 chr3R 5893350 5893421 32 218 4.0 9.0 6.5 4.3 285 chr3R 5893136 intron CG34113 - chr3R 5893278 intron CG34113 - chr3R 5893421 intron CG34113 - chr3R_32_5890001 chr3R_5890001 RAL-306_125b 2440 chr3R 5927533 5927559 chr3R 5927812 5927849 pogo 8 287 10.5 9.0 9.8 0.7 316 chr3R 5927533 intron CG34113 - chr3R 5927691 intron CG34113 - chr3R 5927849 intron CG34113 - chr3R_8_5925001 chr3R_5925001 RAL-306_125b 2441 chr3R 5927560 5927588 chr3R 5927805 5927878 pogo 8 282 4.5 7.5 6.0 1.1 318 chr3R 5927560 intron CG34113 - chr3R 5927719 intron CG34113 - chr3R 5927878 intron CG34113 - chr3R_8_5925001 chr3R_5925001 RAL-306_125b 2442 chr3R 5988857 5988926 chr3R 5989108 5989177 17 250 10.5 8.0 9.2 1.7 320 chr3R 5988857 intergenic CR44927 + chr3R 5989017 intergenic CR44927 + chr3R 5989177 intergenic CR44927 + chr3R_17_5985001 chr3R_5985001 RAL-306_125b 2443 chr3R 6015565 6015580 chr3R 6015692 6015707 8 127 2.5 18.5 10.5 0.7 142 chr3R 6015565 intergenic not near genes chr3R 6015636 intergenic not near genes chr3R 6015707 intergenic not near genes chr3R_8_6015001 chr3R_6015001 RAL-306_125b 2444 chr3R 6015927 6015993 chr3R 6024473 6024543 Tirant 12 8542 3.0 5.5 4.2 2.3 8616 chr3R 6015927 intergenic not near genes chr3R 6020235 intergenic not near genes chr3R 6024543 intergenic not near genes chr3R_12_6020001 chr3R_6020001 RAL-306_125b 2445 chr3R 6061130 6061140 chr3R 6061297 6061307 4 167 43.0 12.5 27.8 0.1 177 chr3R 6061130 intergenic not near genes chr3R 6061218 intergenic not near genes chr3R 6061307 intergenic not near genes chr3R_4_6060001 chr3R_6060001 RAL-306_125b 2446 chr3R 6061147 6061189 chr3R 6061296 6061356 22 166 27.5 12.5 20.0 1.0 209 chr3R 6061147 intergenic not near genes chr3R 6061252 intergenic not near genes chr3R 6061356 intergenic not near genes chr3R_22_6060001 chr3R_6060001 RAL-306_125b 2447 chr3R 6060878 6060901 chr3R 6061205 6061228 6 328 38.0 30.5 34.2 0.2 350 chr3R 6060878 intergenic not near genes chr3R 6061053 intergenic not near genes chr3R 6061228 intergenic not near genes chr3R_6_6060001 chr3R_6060001 RAL-306_125b 2448 chr3R 6060876 6060925 chr3R 6061240 6061258 8 336 47.0 14.5 30.8 0.3 382 chr3R 6060876 intergenic not near genes chr3R 6061067 intergenic not near genes chr3R 6061258 intergenic not near genes chr3R_8_6060001 chr3R_6060001 RAL-306_125b 2449 chr3R 6076480 6076553 chr3R 6076633 6076644 11 147 7.5 0.0 3.8 2.3 164 chr3R 6076480 intergenic Or83c - chr3R 6076562 intergenic Or83c - chr3R 6076644 intergenic Or83c - chr3R_11_6075001 chr3R_6075001 RAL-306_125b 2450 chr3R 6119120 6119151 chr3R 6119246 6119287 9 133 9.0 19.0 14.0 0.6 167 chr3R 6119120 intergenic not near genes chr3R 6119204 intergenic not near genes chr3R 6119287 intergenic not near genes chr3R_9_6115001 chr3R_6115001 RAL-306_125b 2451 chr3R 6121137 6121180 chr3R 6121372 6121448 BS 13 252 0.5 5.0 2.8 3.4 311 chr3R 6121137 intergenic not near genes chr3R 6121292 intergenic not near genes chr3R 6121448 intergenic not near genes chr3R_13_6120001 chr3R_6120001 RAL-306_125b 2452 chr3R 6158466 6158491 chr3R 6167099 6167124 Tirant 8 8632 17.5 6.0 11.8 0.6 8658 chr3R 6158466 intergenic not near genes chr3R 6162795 intergenic not near genes chr3R 6167124 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 RAL-306_125b 2453 chr3R 6158492 6158533 chr3R 6167098 6167166 Tirant 5 8627 7.5 6.0 6.8 0.6 8674 chr3R 6158492 intergenic not near genes chr3R 6162829 intergenic not near genes chr3R 6167166 intergenic CG1077 + chr3R_5_6160001 chr3R_6160001 RAL-306_125b 2454 chr3R 6171101 6171176 chr3R 6171513 6171588 26 412 12.0 11.5 11.8 2.0 487 chr3R 6171101 intergenic not near genes chr3R 6171344 intergenic not near genes chr3R 6171588 intergenic not near genes chr3R_26_6170001 chr3R_6170001 RAL-306_125b 2455 chr3R 6175126 6175201 chr3R 6182448 6182468 HMS-Beagle2 19 7313 9.5 5.0 7.2 2.3 7342 chr3R 6175126 intergenic Osi1 + chr3R 6178797 intron CR45194 + chr3R 6182468 intergenic CR45194 + chr3R_19_6175001 chr3R_6175001 RAL-306_125b 2456 chr3R 6226584 6226646 chr3R 6226722 6226783 19 137 7.5 10.5 9.0 1.9 199 chr3R 6226584 intergenic not near genes chr3R 6226684 intergenic not near genes chr3R 6226783 intergenic not near genes chr3R_19_6225001 chr3R_6225001 RAL-306_125b 2457 chr3R 6420948 6420996 chr3R 6421109 6421137 13 159 5.0 3.0 4.0 2.6 189 chr3R 6420948 intron gpp + chr3R 6421042 intron gpp + chr3R 6421137 intron gpp + chr3R_13_6420001 chr3R_6420001 RAL-306_125b 2458 chr3R 6461527 6461596 chr3R 6461658 6461726 18 130 9.0 8.0 8.5 1.9 199 chr3R 6461527 intergenic not near genes chr3R 6461626 intergenic not near genes chr3R 6461726 intergenic not near genes chr3R_18_6460001 chr3R_6460001 RAL-306_125b 2459 chr3R 6509996 6510010 chr3R 6515127 6515131 jockey 6 5129 16.5 14.0 15.2 0.4 5135 chr3R 6509996 intergenic not near genes chr3R 6512564 intergenic not near genes chr3R 6515131 intergenic not near genes chr3R_6_6510001 chr3R_6510001 RAL-306_125b 2460 chr3R 6510012 6510054 chr3R 6515116 6515133 jockey 13 5122 8.5 11.5 10.0 1.2 5121 chr3R 6510012 intergenic not near genes chr3R 6512572 intergenic not near genes chr3R 6515133 intergenic not near genes chr3R_13_6510001 chr3R_6510001 RAL-306_125b 2461 chr3R 6519069 6519139 chr3R 6519227 6519300 19 160 9.0 8.5 8.8 1.9 231 chr3R 6519069 intergenic not near genes chr3R 6519184 intergenic not near genes chr3R 6519300 intergenic not near genes chr3R_19_6515001 chr3R_6515001 RAL-306_125b 2462 chr3R 6538174 6538184 chr3R 6538308 6538324 4 140 10.5 4.5 7.5 0.5 150 chr3R 6538174 intron dpr11 - chr3R 6538249 intron dpr11 - chr3R 6538324 exon dpr11 - chr3R_4_6535001 chr3R_6535001 RAL-306_125b 2463 chr3R 6538196 6538228 chr3R 6538304 6538341 6 130 6.5 4.5 5.5 0.9 145 chr3R 6538196 intron dpr11 - chr3R 6538268 intron dpr11 - chr3R 6538341 exon dpr11 - chr3R_6_6535001 chr3R_6535001 RAL-306_125b 2464 chr3R 6550277 6550319 chr3R 6550408 6550450 10 127 9.5 5.0 7.2 1.2 173 chr3R 6550277 intron dpr11 - chr3R 6550364 intron dpr11 - chr3R 6550450 intron dpr11 - chr3R_10_6550001 chr3R_6550001 RAL-306_125b 2465 chr3R 6550325 6550350 chr3R 6550406 6550481 11 125 3.5 5.0 4.2 2.1 156 chr3R 6550325 intron dpr11 - chr3R 6550403 intron dpr11 - chr3R 6550481 intron dpr11 - chr3R_11_6550001 chr3R_6550001 RAL-306_125b 2466 chr3R 6551076 6551139 chr3R 6551220 6551248 24 142 5.0 10.5 7.8 2.7 172 chr3R 6551076 intron dpr11 - chr3R 6551162 intron dpr11 - chr3R 6551248 intron dpr11 - chr3R_24_6550001 chr3R_6550001 RAL-306_125b 2467 chr3R 6561909 6561974 chr3R 6562043 6562108 26 133 5.5 8.5 7.0 3.2 199 chr3R 6561909 intron dpr11 - chr3R 6562008 intron dpr11 - chr3R 6562108 intron dpr11 - chr3R_26_6560001 chr3R_6560001 RAL-306_125b 2468 chr3R 6639875 6639931 chr3R 6639993 6640063 13 128 4.0 2.5 3.2 3.1 188 chr3R 6639875 intergenic not near genes chr3R 6639969 intergenic not near genes chr3R 6640063 intergenic not near genes chr3R_13_6635001 chr3R_6635001 RAL-306_125b 2469 chr3R 6687996 6688051 chr3R 6688208 6688263 12 212 7.0 6.0 6.5 1.6 267 chr3R 6687996 3` UTR Ccp84Ag + chr3R 6688130 intergenic Ccp84Ag + chr3R 6688263 intergenic Ccp84Ag + chr3R_12_6685001 chr3R_6685001 RAL-306_125b 2470 chr3R 6697961 6698024 chr3R 6698090 6698153 27 127 7.5 5.5 6.5 3.6 192 chr3R 6697961 intergenic not near genes chr3R 6698057 intergenic not near genes chr3R 6698153 intergenic not near genes chr3R_27_6695001 chr3R_6695001 RAL-306_125b 2471 chr3R 6737454 6737524 chr3R 6739291 6739361 Doc 10 1836 2.5 10.0 6.2 1.4 1907 chr3R 6737454 intron pb - chr3R 6738408 intron pb - chr3R 6739361 intron pb - chr3R_10_6735001 chr3R_6735001 RAL-306_125b 2472 chr3R 6743109 6743112 chr3R 6743242 6743245 5 133 17.5 6.5 12.0 0.4 136 chr3R 6743109 intergenic zen2 - chr3R 6743177 3` UTR zen2 - chr3R 6743245 3` UTR zen2 - chr3R_5_6740001 chr3R_6740001 RAL-306_125b 2473 chr3R 6743114 6743167 chr3R 6743241 6743300 12 132 7.0 6.5 6.8 1.5 186 chr3R 6743114 intergenic zen2 - chr3R 6743207 3` UTR zen2 - chr3R 6743300 exon zen2 - chr3R_12_6740001 chr3R_6740001 RAL-306_125b 2474 chr3R 6773537 6773583 chr3R 6773643 6773722 14 129 6.5 4.5 5.5 2.2 185 chr3R 6773537 intron CR42721 + chr3R 6773630 intron CR42721 + chr3R 6773722 intron CR42721 + chr3R_14_6770001 chr3R_6770001 RAL-306_125b 2475 chr3R 6780405 6780480 chr3R 6780538 6780613 23 133 9.5 11.0 10.2 2.1 208 chr3R 6780405 intergenic not near genes chr3R 6780509 intergenic not near genes chr3R 6780613 intergenic not near genes chr3R_23_6780001 chr3R_6780001 RAL-306_125b 2476 chr3R 6782402 6782463 chr3R 6782531 6782592 23 128 13.0 11.0 12.0 1.8 190 chr3R 6782402 intergenic not near genes chr3R 6782497 intergenic not near genes chr3R 6782592 intergenic not near genes chr3R_23_6780001 chr3R_6780001 RAL-306_125b 2477 chr3R 6803696 6803747 chr3R 6803831 6803873 8 132 1.5 4.5 3.0 2.0 177 chr3R 6803696 intergenic not near genes chr3R 6803784 intergenic not near genes chr3R 6803873 intergenic not near genes chr3R_8_6800001 chr3R_6800001 RAL-306_125b 2478 chr3R 6807220 6807259 chr3R 6807352 6807391 13 132 15.5 10.0 12.8 0.9 171 chr3R 6807220 intergenic not near genes chr3R 6807306 intergenic not near genes chr3R 6807391 intergenic not near genes chr3R_13_6805001 chr3R_6805001 RAL-306_125b 2479 chr3R 6807260 6807284 chr3R 6807347 6807416 10 127 9.5 8.0 8.8 1.0 156 chr3R 6807260 intergenic not near genes chr3R 6807338 intergenic not near genes chr3R 6807416 intergenic not near genes chr3R_10_6805001 chr3R_6805001 RAL-306_125b 2480 chr3R 6827975 6827977 chr3R 6828101 6828103 4 126 17.0 8.5 12.8 0.3 128 chr3R 6827975 intron Scr - chr3R 6828039 intron Scr - chr3R 6828103 intron Scr - chr3R_4_6825001 chr3R_6825001 RAL-306_125b 2481 chr3R 6827979 6828039 chr3R 6828100 6828165 30 124 4.0 8.5 6.2 4.2 186 chr3R 6827979 intron Scr - chr3R 6828072 intron Scr - chr3R 6828165 intron Scr - chr3R_30_6825001 chr3R_6825001 RAL-306_125b 2482 chr3R 6856334 6856402 chr3R 6856501 6856569 22 167 6.5 6.0 6.2 3.1 235 chr3R 6856334 intergenic not near genes chr3R 6856452 intergenic not near genes chr3R 6856569 intergenic not near genes chr3R_22_6855001 chr3R_6855001 RAL-306_125b 2483 chr3R 6862175 6862246 chr3R 6862312 6862374 19 136 3.0 5.0 4.0 3.8 199 chr3R 6862175 intergenic not near genes chr3R 6862274 intergenic not near genes chr3R 6862374 intergenic not near genes chr3R_19_6860001 chr3R_6860001 RAL-306_125b 2484 chr3R 6891241 6891263 chr3R 6891321 6891389 10 114 2.5 6.5 4.5 1.8 148 chr3R 6891241 intergenic not near genes chr3R 6891315 intergenic not near genes chr3R 6891389 intergenic not near genes chr3R_10_6890001 chr3R_6890001 RAL-306_125b 2485 chr3R 6900700 6900723 chr3R 6900827 6900850 6 127 10.0 14.5 12.2 0.5 150 chr3R 6900700 intron Antp - chr3R 6900775 intron Antp - chr3R 6900850 intron Antp - chr3R_6_6900001 chr3R_6900001 RAL-306_125b 2486 chr3R 6912069 6912134 chr3R 6912213 6912295 18 160 3.0 1.5 2.2 5.6 226 chr3R 6912069 intron Antp - chr3R 6912182 intron Antp - chr3R 6912295 intron Antp - chr3R_18_6910001 chr3R_6910001 RAL-306_125b 2487 chr3R 6923562 6923596 chr3R 6923673 6923732 10 130 7.0 5.5 6.2 1.4 170 chr3R 6923562 intron Antp - chr3R 6923647 intron Antp - chr3R 6923732 intron Antp - chr3R_10_6920001 chr3R_6920001 RAL-306_125b 2488 chr3R 6961141 6961176 chr3R 6961270 6961305 7 127 8.0 11.5 9.8 0.6 164 chr3R 6961141 intron Antp - chr3R 6961223 intron Antp - chr3R 6961305 intron Antp - chr3R_7_6960001 chr3R_6960001 RAL-306_125b 2489 chr3R 7012162 7012227 chr3R 7012290 7012355 25 122 5.5 6.5 6.0 3.6 193 chr3R 7012162 intergenic not near genes chr3R 7012258 intergenic not near genes chr3R 7012355 intergenic not near genes chr3R_25_7010001 chr3R_7010001 RAL-306_125b 2490 chr3R 7051081 7051140 chr3R 7051210 7051269 18 129 8.5 7.0 7.8 2.0 188 chr3R 7051081 intergenic not near genes chr3R 7051175 intergenic not near genes chr3R 7051269 intergenic not near genes chr3R_18_7050001 chr3R_7050001 RAL-306_125b 2491 chr3R 7095930 7095935 chr3R 7096065 7096070 5 135 19.5 10.5 15.0 0.3 140 chr3R 7095930 intergenic not near genes chr3R 7096000 intergenic not near genes chr3R 7096070 intergenic not near genes chr3R_5_7095001 chr3R_7095001 RAL-306_125b 2492 chr3R 7103885 7103956 chr3R 7104034 7104105 28 145 5.5 6.5 6.0 4.0 220 chr3R 7103885 intron Alh - chr3R 7103995 intron Alh - chr3R 7104105 intron Alh - chr3R_28_7100001 chr3R_7100001 RAL-306_125b 2493 chr3R 7106477 7106537 chr3R 7106608 7106668 22 131 7.5 7.0 7.2 2.7 191 chr3R 7106477 intron Alh - chr3R 7106572 intron Alh - chr3R 7106668 intron Alh - chr3R_22_7105001 chr3R_7105001 RAL-306_125b 2494 chr3R 7121680 7121736 chr3R 7121823 7121879 14 142 10.5 10.5 10.5 1.2 199 chr3R 7121680 exon Alh - chr3R 7121780 intron Alh - chr3R 7121879 intron Alh - chr3R_14_7120001 chr3R_7120001 RAL-306_125b 2495 chr3R 7147060 7147102 chr3R 7147217 7147258 7 160 10.0 9.0 9.5 0.7 198 chr3R 7147060 intron,exon CG2656 +,gfzf - chr3R 7147159 intron,intron CG2656 +,gfzf - chr3R 7147258 intron,intron CG2656 +,gfzf - chr3R_7_7145001 chr3R_7145001 RAL-306_125b 2496 chr3R 7173633 7173700 chr3R 7173762 7173829 26 128 6.0 11.0 8.5 2.7 196 chr3R 7173633 intron sas + chr3R 7173731 intron sas + chr3R 7173829 intron sas + chr3R_26_7170001 chr3R_7170001 RAL-306_125b 2497 chr3R 7206840 7206886 chr3R 7206967 7206990 8 125 1.0 7.5 4.2 1.5 150 chr3R 7206840 intergenic not near genes chr3R 7206915 intergenic CG1288 - chr3R 7206990 intergenic CG1288 - chr3R_8_7205001 chr3R_7205001 RAL-306_125b 2498 chr3R 7372953 7373023 chr3R 7373072 7373097 13 110 6.5 7.0 6.8 1.7 144 chr3R 7372953 intergenic not near genes chr3R 7373025 intergenic not near genes chr3R 7373097 intergenic not near genes chr3R_13_7370001 chr3R_7370001 RAL-306_125b 2499 chr3R 7385551 7385617 chr3R 7385672 7385703 9 111 7.0 7.0 7.0 1.1 152 chr3R 7385551 intergenic not near genes chr3R 7385627 intergenic not near genes chr3R 7385703 intergenic not near genes chr3R_9_7385001 chr3R_7385001 RAL-306_125b 2500 chr3R 7601915 7601955 chr3R 7602046 7602086 8 131 9.0 6.5 7.8 0.9 171 chr3R 7601915 intron CG34127 - chr3R 7602000 intron CG34127 - chr3R 7602086 intron CG34127 - chr3R_8_7600001 chr3R_7600001 RAL-306_125b 2501 chr3R 7601959 7601985 chr3R 7602041 7602106 9 116 4.0 5.5 4.8 1.6 147 chr3R 7601959 intron CG34127 - chr3R 7602032 intron CG34127 - chr3R 7602106 intron CG34127 - chr3R_9_7600001 chr3R_7600001 RAL-306_125b 2502 chr3R 7676925 7676992 chr3R 7677120 7677177 16 190 6.0 6.0 6.0 2.3 252 chr3R 7676925 intron Nlg1 + chr3R 7677051 intron Nlg1 + chr3R 7677177 intron Nlg1 + chr3R_16_7675001 chr3R_7675001 RAL-306_125b 2503 chr3R 7683607 7683672 chr3R 7683956 7684021 14 336 3.0 6.5 4.8 2.4 414 chr3R 7683607 intron Nlg1 + chr3R 7683814 intron Nlg1 + chr3R 7684021 intron Nlg1 + chr3R_14_7680001 chr3R_7680001 RAL-306_125b 2504 chr3R 7694533 7694538 chr3R 7713644 7713649 invader3 4 19110 18.5 11.0 14.8 0.3 19116 chr3R 7694533 3` UTR Nlg1 + chr3R 7704091 intergenic not near genes chr3R 7713649 intergenic not near genes chr3R_4_7700001 chr3R_7700001 RAL-306_125b 2505 chr3R 7694541 7694607 chr3R 7713642 7713718 invader3 21 19109 7.0 10.5 8.8 2.1 19177 chr3R 7694541 3` UTR Nlg1 + chr3R 7704130 intergenic not near genes chr3R 7713718 intergenic not near genes chr3R_21_7700001 chr3R_7700001 RAL-306_125b 2506 chr3R 7726148 7726180 chr3R 7726269 7726307 13 125 5.5 8.0 6.8 1.7 159 chr3R 7726148 intergenic not near genes chr3R 7726228 intergenic not near genes chr3R 7726307 intergenic not near genes chr3R_13_7725001 chr3R_7725001 RAL-306_125b 2507 chr3R 7729420 7729491 chr3R 7737408 7737460 Stalker2 17 7984 7.0 8.0 7.5 2.0 8040 chr3R 7729420 intergenic not near genes chr3R 7733440 intergenic not near genes chr3R 7737460 intergenic not near genes chr3R_17_7730001 chr3R_7730001 RAL-306_125b 2508 chr3R 7837983 7838048 chr3R 7838257 7838322 22 273 7.0 12.0 9.5 2.1 339 chr3R 7837983 intron CG34384 + chr3R 7838152 intron CG34384 + chr3R 7838322 intron CG34384 + chr3R_22_7835001 chr3R_7835001 RAL-306_125b 2509 chr3R 7884630 7884700 chr3R 7884758 7884793 13 116 5.0 5.0 5.0 2.2 163 chr3R 7884630 intron CG17816 - chr3R 7884712 intron CG17816 - chr3R 7884793 intron CG17816 - chr3R_13_7880001 chr3R_7880001 RAL-306_125b 2510 chr3R 7773341 7773344 chr3R 7890530 7890534 5 117189 27.0 28.0 27.5 0.2 117193 chr3R 7773341 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890534 intron mRpS9 - chr3R_5_7830001 chr3R_7830001 RAL-306_125b 2511 chr3R 7948412 7948468 chr3R 7948524 7948595 21 122 5.0 8.0 6.5 2.8 183 chr3R 7948412 intron dsx - chr3R 7948504 intron dsx - chr3R 7948595 intron dsx - chr3R_21_7945001 chr3R_7945001 RAL-306_125b 2512 chr3R 7973279 7973329 chr3R 7974391 7974441 1360 23 1112 14.5 13.0 13.8 1.6 1162 chr3R 7973279 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974441 3` UTR CD98hc - chr3R_23_7970001 chr3R_7970001 RAL-306_125b 2513 chr3R 8049019 8049038 chr3R 8049643 8049662 7 624 0.0 4.0 2.0 2.3 643 chr3R 8049019 intron CG43060 + chr3R 8049340 intron,intron CG43060 +,CG43618 + chr3R 8049662 intron CG43060 + chr3R_7_8045001 chr3R_8045001 RAL-306_125b 2514 chr3R 8082536 8082592 chr3R 8082663 8082719 16 123 12.5 14.0 13.2 1.1 183 chr3R 8082536 intron mAChR-B + chr3R 8082628 intron mAChR-B + chr3R 8082719 exon mAChR-B + chr3R_16_8080001 chr3R_8080001 RAL-306_125b 2515 chr3R 8090530 8090571 chr3R 8094084 8094120 297 15 3550 8.0 5.0 6.5 2.0 3590 chr3R 8090530 intergenic CR44330 + chr3R 8092325 intergenic not near genes chr3R 8094120 intergenic CG7900 + chr3R_15_8090001 chr3R_8090001 RAL-306_125b 2516 chr3R 8094367 8094429 chr3R 8099722 8099784 Transpac 20 5353 9.5 12.5 11.0 1.7 5417 chr3R 8094367 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099784 intron CG7900 + chr3R_20_8095001 chr3R_8095001 RAL-306_125b 2517 chr3R 8101714 8101784 chr3R 8104848 8104917 G2 15 3134 6.0 5.5 5.8 2.2 3203 chr3R 8101714 exon CG7900 + chr3R 8103316 intron CG7900 + chr3R 8104917 3` UTR CG7900 + chr3R_15_8100001 chr3R_8100001 RAL-306_125b 2518 chr3R 8107341 8107411 chr3R 8107525 8107595 27 181 11.0 8.0 9.5 2.6 254 chr3R 8107341 intron puc + chr3R 8107468 intron puc + chr3R 8107595 intron puc + chr3R_27_8105001 chr3R_8105001 RAL-306_125b 2519 chr3R 8199493 8199541 chr3R 8199849 8199897 8 356 8.0 2.0 5.0 1.3 404 chr3R 8199493 intergenic not near genes chr3R 8199695 intergenic not near genes chr3R 8199897 intergenic not near genes chr3R_8_8195001 chr3R_8195001 RAL-306_125b 2520 chr3R 8207516 8207539 chr3R 8208411 8208434 F-element 7 891 14.5 14.5 14.5 0.5 918 chr3R 8207516 intergenic not near genes chr3R 8207975 intergenic not near genes chr3R 8208434 intergenic not near genes chr3R_7_8205001 chr3R_8205001 RAL-306_125b 2521 chr3R 8207542 8207584 chr3R 8208403 8208448 F-element 16 888 5.5 13.0 9.2 1.6 906 chr3R 8207542 intergenic not near genes chr3R 8207995 intergenic not near genes chr3R 8208448 intergenic not near genes chr3R_16_8205001 chr3R_8205001 RAL-306_125b 2522 chr3R 8304196 8304268 chr3R 8304341 8304414 41 145 8.5 8.5 8.5 4.3 218 chr3R 8304196 3` UTR Sgt1 - chr3R 8304305 3` UTR Sgt1 - chr3R 8304414 3` UTR Sgt1 - chr3R_41_8300001 chr3R_8300001 RAL-306_125b 2523 chr3R 8339246 8339247 chr3R 21907534 21907536 10 13568289 31.5 32.5 32.0 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_10_15120001 chr3R_15120001 RAL-306_125b 2524 chr3R 8374141 8374174 chr3R 8374306 8374339 4 165 3.5 10.5 7.0 0.5 198 chr3R 8374141 intron CG45263 - chr3R 8374240 intron CG45263 - chr3R 8374339 intron CG45263 - chr3R_4_8370001 chr3R_8370001 RAL-306_125b 2525 chr3R 8402986 8403037 chr3R 8412192 8412208 roo 9 9207 3.5 10.5 7.0 1.1 9222 chr3R 8402986 intron CG45263 - chr3R 8407597 intron CG45263 - chr3R 8412208 intron CG45263 - chr3R_9_8405001 chr3R_8405001 RAL-306_125b 2526 chr3R 8478031 8478107 chr3R 8478161 8478221 26 123 7.0 7.0 7.0 3.2 190 chr3R 8478031 intergenic CG45263 - chr3R 8478126 intergenic not near genes chr3R 8478221 intergenic not near genes chr3R_26_8475001 chr3R_8475001 RAL-306_125b 2527 chr3R 8552333 8552399 chr3R 8552448 8552514 18 125 9.0 6.5 7.8 2.0 181 chr3R 8552333 intergenic Or85d + chr3R 8552424 intergenic Or85d + chr3R 8552514 intergenic Or85d + chr3R_18_8550001 chr3R_8550001 RAL-306_125b 2528 chr3R 8570468 8570499 chr3R 8575114 8575159 HMS-Beagle 9 4661 7.5 4.0 5.8 1.3 4691 chr3R 8570468 intergenic not near genes chr3R 8572814 intergenic not near genes chr3R 8575159 intergenic not near genes chr3R_9_8570001 chr3R_8570001 RAL-306_125b 2529 chr3R 8601731 8601797 chr3R 8610934 8611000 roo 16 9198 13.0 7.0 10.0 1.5 9269 chr3R 8601731 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8611000 intron 5-HT2B + chr3R_16_8605001 chr3R_8605001 RAL-306_125b 2530 chr3R 8685246 8685315 chr3R 8685396 8685465 25 150 4.5 6.0 5.2 4.0 219 chr3R 8685246 intron CR44937 - chr3R 8685356 intron CR44937 - chr3R 8685465 intron CR44937 - chr3R_25_8685001 chr3R_8685001 RAL-306_125b 2531 chr3R 8707311 8707375 chr3R 8709802 8709860 jockey 12 2489 5.5 4.0 4.8 2.1 2549 chr3R 8707311 intergenic not near genes chr3R 8708586 intergenic not near genes chr3R 8709860 intergenic not near genes chr3R_12_8705001 chr3R_8705001 RAL-306_125b 2532 chr3R 8885235 8885273 chr3R 8885379 8885417 13 143 10.0 6.5 8.2 1.4 182 chr3R 8885235 intron pyd - chr3R 8885326 intron pyd - chr3R 8885417 intron pyd - chr3R_13_8885001 chr3R_8885001 RAL-306_125b 2533 chr3R 8898164 8898212 chr3R 8913808 8913856 297 12 15643 8.0 4.5 6.2 1.7 15692 chr3R 8898164 intron pyd - chr3R 8906010 intron pyd - chr3R 8913856 intron pyd - chr3R_12_8905001 chr3R_8905001 RAL-306_125b 2534 chr3R 8917848 8917850 chr3R 8917978 8917980 4 130 17.5 10.5 14.0 0.3 132 chr3R 8917848 intron pyd - chr3R 8917914 intron pyd - chr3R 8917980 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-306_125b 2535 chr3R 8917851 8917912 chr3R 8917970 8918042 21 124 9.5 9.0 9.2 2.1 191 chr3R 8917851 intron pyd - chr3R 8917946 intron pyd - chr3R 8918042 intron pyd - chr3R_21_8915001 chr3R_8915001 RAL-306_125b 2536 chr3R 8979850 8979910 chr3R 8979968 8980043 18 131 5.5 8.0 6.8 2.3 193 chr3R 8979850 intergenic not near genes chr3R 8979946 intergenic not near genes chr3R 8980043 intergenic not near genes chr3R_18_8975001 chr3R_8975001 RAL-306_125b 2537 chr3R 9036334 9036407 chr3R 9036462 9036475 26 122 10.0 9.5 9.8 2.4 141 chr3R 9036334 intron neur - chr3R 9036404 intron neur - chr3R 9036475 intron neur - chr3R_26_9035001 chr3R_9035001 RAL-306_125b 2538 chr3R 9043701 9043761 chr3R 9043831 9043864 15 130 10.5 6.5 8.5 1.6 163 chr3R 9043701 intron Nmdmc - chr3R 9043782 intron Nmdmc - chr3R 9043864 intron Nmdmc - chr3R_15_9040001 chr3R_9040001 RAL-306_125b 2539 chr3R 9082003 9082006 chr3R 9082146 9082150 4 143 17.5 9.5 13.5 0.3 147 chr3R 9082003 intron pum - chr3R 9082076 intron pum - chr3R 9082150 intron pum - chr3R_4_9080001 chr3R_9080001 RAL-306_125b 2540 chr3R 9082012 9082039 chr3R 9082139 9082183 10 134 10.5 9.5 10.0 0.9 171 chr3R 9082012 intron pum - chr3R 9082098 intron pum - chr3R 9082183 intron pum - chr3R_10_9080001 chr3R_9080001 RAL-306_125b 2541 chr3R 9082042 9082063 chr3R 9082136 9082207 12 134 5.5 9.5 7.5 1.4 165 chr3R 9082042 intron pum - chr3R 9082124 intron pum - chr3R 9082207 intron pum - chr3R_12_9080001 chr3R_9080001 RAL-306_125b 2542 chr3R 9104432 9104500 chr3R 9104572 9104640 28 137 7.5 4.5 6.0 4.0 208 chr3R 9104432 intron pum - chr3R 9104536 intron pum - chr3R 9104640 intron pum - chr3R_28_9100001 chr3R_9100001 RAL-306_125b 2543 chr3R 9108818 9108882 chr3R 9108944 9109002 22 124 9.0 6.5 7.8 2.5 184 chr3R 9108818 intron pum - chr3R 9108910 intron pum - chr3R 9109002 intron pum - chr3R_22_9105001 chr3R_9105001 RAL-306_125b 2544 chr3R 9170883 9170936 chr3R 9171029 9171092 19 155 6.0 8.0 7.0 2.4 209 chr3R 9170883 intron pum - chr3R 9170988 intron pum - chr3R 9171092 intron pum - chr3R_19_9170001 chr3R_9170001 RAL-306_125b 2545 chr3R 9204205 9204243 chr3R 9204342 9204375 9 135 10.5 6.0 8.2 1.0 170 chr3R 9204205 intron pum - chr3R 9204290 intron pum - chr3R 9204375 intron pum - chr3R_9_9200001 chr3R_9200001 RAL-306_125b 2546 chr3R 9204250 9204275 chr3R 9204337 9204402 6 122 3.5 4.5 4.0 1.2 152 chr3R 9204250 intron pum - chr3R 9204326 intron pum - chr3R 9204402 intron pum - chr3R_6_9200001 chr3R_9200001 RAL-306_125b 2547 chr3R 9277512 9277586 chr3R 9277677 9277751 25 160 4.5 5.0 4.8 4.3 239 chr3R 9277512 intergenic not near genes chr3R 9277632 intergenic not near genes chr3R 9277751 intergenic not near genes chr3R_25_9275001 chr3R_9275001 RAL-306_125b 2548 chr3R 9278746 9278802 chr3R 9284056 9284112 Rt1a 19 5309 11.0 12.5 11.8 1.5 5366 chr3R 9278746 intergenic not near genes chr3R 9281429 intergenic not near genes chr3R 9284112 intergenic not near genes chr3R_19_9280001 chr3R_9280001 RAL-306_125b 2549 chr3R 9319537 9319568 chr3R 9320022 9320053 jockey 14 484 14.0 11.0 12.5 1.0 516 chr3R 9319537 intron CG8861 - chr3R 9319795 intron CG8861 - chr3R 9320053 intron CG8861 - chr3R_14_9315001 chr3R_9315001 RAL-306_125b 2550 chr3R 9319572 9319594 chr3R 9320016 9320079 jockey 6 472 8.5 10.0 9.2 0.6 507 chr3R 9319572 intron CG8861 - chr3R 9319826 intron CG8861 - chr3R 9320079 intron CG8861 - chr3R_6_9315001 chr3R_9315001 RAL-306_125b 2551 chr3R 9350460 9350519 chr3R 9350591 9350650 24 130 8.5 12.5 10.5 2.1 190 chr3R 9350460 intron CG45050 + chr3R 9350555 intron CG45050 + chr3R 9350650 intron CG45050 + chr3R_24_9350001 chr3R_9350001 RAL-306_125b 2552 chr3R 9361804 9361838 chr3R 9362095 9362129 pogo 5 291 5.5 13.5 9.5 0.5 325 chr3R 9361804 3` UTR CG45050 + chr3R 9361966 3` UTR CG45050 + chr3R 9362129 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-306_125b 2553 chr3R 9379095 9379176 chr3R 9379227 9379272 12 128 1.0 8.0 4.5 2.2 177 chr3R 9379095 intron FER - chr3R 9379184 intron FER - chr3R 9379272 intron FER - chr3R_12_9375001 chr3R_9375001 RAL-306_125b 2554 chr3R 9382780 9382841 chr3R 9382954 9383016 22 172 7.5 8.0 7.8 2.5 236 chr3R 9382780 intron FER - chr3R 9382898 intron FER - chr3R 9383016 intron FER - chr3R_22_9380001 chr3R_9380001 RAL-306_125b 2555 chr3R 9428771 9428839 chr3R 9428899 9428967 21 127 4.5 7.0 5.8 3.1 196 chr3R 9428771 intron ps + chr3R 9428869 intron ps + chr3R 9428967 intron ps + chr3R_21_9425001 chr3R_9425001 RAL-306_125b 2556 chr3R 9620956 9620956 chr3R 21907534 21907536 4 12286579 20.5 32.5 26.5 0.1 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-306_125b 2557 chr3R 9702227 9702285 chr3R 9702353 9702356 16 114 6.0 8.5 7.2 2.0 129 chr3R 9702227 intron Unc-115a - chr3R 9702292 intron Unc-115a - chr3R 9702356 intron Unc-115a - chr3R_16_9700001 chr3R_9700001 RAL-306_125b 2558 chr3R 9853133 9853193 chr3R 9853292 9853352 16 157 7.5 6.0 6.8 2.1 219 chr3R 9853133 intron Teh1 - chr3R 9853242 intron Teh1 - chr3R 9853352 intron Teh1 - chr3R_16_9850001 chr3R_9850001 RAL-306_125b 2559 chr3R 9898751 9898760 chr3R 9898893 9898902 5 142 15.0 10.0 12.5 0.4 151 chr3R 9898751 intron Glut4EF + chr3R 9898826 intron Glut4EF + chr3R 9898902 intron Glut4EF + chr3R_5_9895001 chr3R_9895001 RAL-306_125b 2560 chr3R 9898761 9898807 chr3R 9898887 9898949 11 135 7.5 8.0 7.8 1.2 188 chr3R 9898761 intron Glut4EF + chr3R 9898855 intron Glut4EF + chr3R 9898949 intron Glut4EF + chr3R_11_9895001 chr3R_9895001 RAL-306_125b 2561 chr3R 9920795 9920810 chr3R 9920942 9920957 4 147 7.5 22.5 15.0 0.2 162 chr3R 9920795 intron Glut4EF + chr3R 9920876 intron Glut4EF + chr3R 9920957 intron Glut4EF + chr3R_4_9920001 chr3R_9920001 RAL-306_125b 2562 chr3R 10231743 10231814 chr3R 10237370 10237425 mdg3 14 5626 7.0 12.0 9.5 1.3 5682 chr3R 10231743 intron CG42795 + chr3R 10234584 intron CG42795 + chr3R 10237425 intron CG42795 + chr3R_14_10230001 chr3R_10230001 RAL-306_125b 2563 chr3R 10255335 10255383 chr3R 10260825 10260869 I-element 13 5488 19.0 10.0 14.5 0.8 5534 chr3R 10255335 intergenic Sirt6 -,CG3999 + chr3R 10258102 intron Sirt6 - chr3R 10260869 exon Sirt6 - chr3R_13_10255001 chr3R_10255001 RAL-306_125b 2564 chr3R 10277085 10277159 chr3R 10277215 10277289 32 128 8.0 7.5 7.8 3.6 204 chr3R 10277085 intron CG43143 + chr3R 10277187 intron CG43143 + chr3R 10277289 intron CG43143 + chr3R_32_10275001 chr3R_10275001 RAL-306_125b 2565 chr3R 10394027 10394096 chr3R 10394176 10394245 25 148 8.0 8.5 8.2 2.7 218 chr3R 10394027 intron cwo + chr3R 10394136 intron cwo + chr3R 10394245 intron cwo + chr3R_25_10390001 chr3R_10390001 RAL-306_125b 2566 chr3R 10487597 10487618 chr3R 10487726 10487726 5 125 7.5 14.5 11.0 0.4 129 chr3R 10487597 intergenic not near genes chr3R 10487662 intergenic not near genes chr3R 10487726 intergenic not near genes chr3R_5_10485001 chr3R_10485001 RAL-306_125b 2567 chr3R 10512706 10512763 chr3R 10512839 10512864 18 130 7.5 6.5 7.0 2.2 158 chr3R 10512706 intron hth - chr3R 10512785 intron hth - chr3R 10512864 intron hth - chr3R_18_10510001 chr3R_10510001 RAL-306_125b 2568 chr3R 10535285 10535343 chr3R 10535428 10535486 17 143 11.5 8.0 9.8 1.6 201 chr3R 10535285 intron hth - chr3R 10535386 intron hth - chr3R 10535486 intron hth - chr3R_17_10535001 chr3R_10535001 RAL-306_125b 2569 chr3R 10593425 10593456 chr3R 10593517 10593584 9 125 6.5 8.0 7.2 1.1 159 chr3R 10593425 intron hth - chr3R 10593504 intron hth - chr3R 10593584 exon hth - chr3R_9_10590001 chr3R_10590001 RAL-306_125b 2570 chr3R 10627588 10627627 chr3R 10627746 10627785 22 158 5.0 14.0 9.5 2.1 197 chr3R 10627588 intergenic not near genes chr3R 10627686 intergenic not near genes chr3R 10627785 intergenic not near genes chr3R_22_10625001 chr3R_10625001 RAL-306_125b 2571 chr3R 10646062 10646134 chr3R 10646263 10646295 23 198 9.0 8.0 8.5 2.4 233 chr3R 10646062 intergenic CR44018 + chr3R 10646178 intergenic CR44018 + chr3R 10646295 intergenic not near genes chr3R_23_10645001 chr3R_10645001 RAL-306_125b 2572 chr3R 10727608 10727679 chr3R 10727728 10727759 18 122 6.5 4.0 5.2 2.9 151 chr3R 10727608 intergenic not near genes chr3R 10727684 intergenic not near genes chr3R 10727759 intergenic not near genes chr3R_18_10725001 chr3R_10725001 RAL-306_125b 2573 chr3R 10732796 10732868 chr3R 10732931 10732977 26 126 6.5 9.5 8.0 2.9 181 chr3R 10732796 intergenic not near genes chr3R 10732886 intergenic not near genes chr3R 10732977 intergenic not near genes chr3R_26_10730001 chr3R_10730001 RAL-306_125b 2574 chr3R 10785771 10785831 chr3R 10785900 10785960 30 128 11.0 10.5 10.8 2.5 189 chr3R 10785771 intron Rbp1 + chr3R 10785866 intron Rbp1 + chr3R 10785960 intron Rbp1 + chr3R_30_10785001 chr3R_10785001 RAL-306_125b 2575 chr3R 10804138 10804194 chr3R 10811720 10811776 17.6 15 7582 3.0 9.0 6.0 2.1 7638 chr3R 10804138 intergenic CG14692 - chr3R 10807957 intergenic not near genes chr3R 10811776 3` UTR CG14693 - chr3R_15_10805001 chr3R_10805001 RAL-306_125b 2576 chr3R 10868557 10868604 chr3R 10868671 10868692 6 111 4.5 3.5 4.0 1.2 135 chr3R 10868557 5` UTR SelR - chr3R 10868624 5` UTR SelR - chr3R 10868692 intergenic Tsp86D +,SelR - chr3R_6_10865001 chr3R_10865001 RAL-306_125b 2577 chr3R 10904861 10904937 chr3R 10905115 10905187 21 250 3.0 2.5 2.8 5.5 326 chr3R 10904861 intergenic not near genes chr3R 10905024 intergenic not near genes chr3R 10905187 intergenic not near genes chr3R_21_10905001 chr3R_10905001 RAL-306_125b 2578 chr3R 10906793 10906857 chr3R 10906909 10906983 24 123 5.5 6.5 6.0 3.4 190 chr3R 10906793 intergenic not near genes chr3R 10906888 intergenic not near genes chr3R 10906983 intergenic not near genes chr3R_24_10905001 chr3R_10905001 RAL-306_125b 2579 chr3R 10919668 10919714 chr3R 10919770 10919842 26 125 8.5 8.5 8.5 2.7 174 chr3R 10919668 intergenic not near genes chr3R 10919755 intergenic not near genes chr3R 10919842 intergenic not near genes chr3R_26_10915001 chr3R_10915001 RAL-306_125b 2580 chr3R 10920004 10920066 chr3R 10920132 10920194 13 128 9.5 7.0 8.2 1.4 190 chr3R 10920004 intergenic not near genes chr3R 10920099 intergenic not near genes chr3R 10920194 intergenic not near genes chr3R_13_10920001 chr3R_10920001 RAL-306_125b 2581 chr3R 10957836 10957885 chr3R 10963253 10963324 Rt1c 15 5427 4.5 1.5 3.0 3.8 5488 chr3R 10957836 intergenic not near genes chr3R 10960580 intergenic not near genes chr3R 10963324 intergenic not near genes chr3R_15_10960001 chr3R_10960001 RAL-306_125b 2582 chr3R 11024150 11024179 chr3R 11024283 11024325 9 141 13.5 8.5 11.0 0.8 175 chr3R 11024150 intron CG34114 + chr3R 11024238 intron CG34114 + chr3R 11024325 intron CG34114 + chr3R_9_11020001 chr3R_11020001 RAL-306_125b 2583 chr3R 11024180 11024194 chr3R 11024274 11024340 8 134 11.0 8.5 9.8 0.7 160 chr3R 11024180 intron CG34114 + chr3R 11024260 intron CG34114 + chr3R 11024340 intron CG34114 + chr3R_8_11020001 chr3R_11020001 RAL-306_125b 2584 chr3R 11065541 11065579 chr3R 11071245 11071283 297 6 5702 10.5 7.0 8.8 0.6 5742 chr3R 11065541 intergenic not near genes chr3R 11068412 intergenic not near genes chr3R 11071283 intergenic not near genes chr3R_6_11065001 chr3R_11065001 RAL-306_125b 2585 chr3R 11099608 11099684 chr3R 11099789 11099866 27 178 7.5 2.5 5.0 4.5 258 chr3R 11099608 intergenic not near genes chr3R 11099737 intergenic not near genes chr3R 11099866 intergenic not near genes chr3R_27_11095001 chr3R_11095001 RAL-306_125b 2586 chr3R 11154996 11155067 chr3R 11155124 11155195 28 126 6.5 7.5 7.0 3.5 199 chr3R 11154996 intron Ugt86Dc + chr3R 11155096 intron Ugt86Dc + chr3R 11155195 exon Ugt86Dc + chr3R_28_11155001 chr3R_11155001 RAL-306_125b 2587 chr3R 11172770 11172819 chr3R 11172899 11172960 18 138 11.5 10.5 11.0 1.5 190 chr3R 11172770 intergenic Ugt35a - chr3R 11172865 intergenic Ugt35a - chr3R 11172960 intergenic Ugt35a -,Ugt86Dj - chr3R_18_11170001 chr3R_11170001 RAL-306_125b 2588 chr3R 11174549 11174610 chr3R 11175313 11175373 11 764 41.0 34.0 37.5 0.3 824 chr3R 11174549 exon Ugt86Dj - chr3R 11174961 intron Ugt86Dj - chr3R 11175373 exon Ugt86Dj - chr3R_11_11170001 chr3R_11170001 RAL-306_125b 2589 chr3R 11197945 11198011 chr3R 11198090 11198094 17 144 10.5 9.5 10.0 1.5 149 chr3R 11197945 intron cu + chr3R 11198020 intron cu + chr3R 11198094 intron cu + chr3R_17_11195001 chr3R_11195001 RAL-306_125b 2590 chr3R 11247193 11247225 chr3R 11247324 11247356 INE-1 6 129 18.0 3.0 10.5 0.5 163 chr3R 11247193 intergenic CG5214 +,CR43283 - chr3R 11247274 intergenic CR43283 -,CG5214 + chr3R 11247356 intergenic CR43283 -,CG5214 + chr3R_6_11245001 chr3R_11245001 RAL-306_125b 2591 chr3R 11265898 11265913 chr3R 11266024 11266047 7 131 8.5 10.5 9.5 0.7 149 chr3R 11265898 intergenic not near genes chr3R 11265972 intergenic not near genes chr3R 11266047 intergenic not near genes chr3R_7_11265001 chr3R_11265001 RAL-306_125b 2592 chr3R 11358304 11358327 chr3R 11358439 11358457 6 134 6.5 6.0 6.2 0.8 153 chr3R 11358304 intron pros + chr3R 11358380 intron pros + chr3R 11358457 intron pros + chr3R_6_11355001 chr3R_11355001 RAL-306_125b 2593 chr3R 11379192 11379228 chr3R 11388397 11388428 roo 15 9204 15.5 9.5 12.5 1.1 9236 chr3R 11379192 intron pros + chr3R 11383810 intron pros + chr3R 11388428 intron pros + chr3R_15_11380001 chr3R_11380001 RAL-306_125b 2594 chr3R 11518781 11518834 chr3R 11518922 11518975 21 137 14.0 6.0 10.0 1.9 194 chr3R 11518781 intergenic not near genes chr3R 11518878 intergenic not near genes chr3R 11518975 intergenic not near genes chr3R_21_11515001 chr3R_11515001 RAL-306_125b 2595 chr3R 11566622 11566688 chr3R 11567007 11567073 24 392 63.5 54.5 59.0 0.4 451 chr3R 11566622 intron,intron fabp -,sea - chr3R 11566848 intron,intron fabp -,sea - chr3R 11567073 intergenic fabp -,sea - chr3R_24_11565001 chr3R_11565001 RAL-306_125b 2596 chr3R 11656453 11656509 chr3R 11656583 11656639 23 128 11.5 9.0 10.2 2.1 186 chr3R 11656453 5` UTR CG42327 + chr3R 11656546 5` UTR CG42327 + chr3R 11656639 5` UTR CG42327 + chr3R_23_11655001 chr3R_11655001 RAL-306_125b 2597 chr3R 11656513 11656528 chr3R 11656643 11656658 13 130 9.5 16.0 12.8 0.9 145 chr3R 11656513 5` UTR CG42327 + chr3R 11656586 5` UTR CG42327 + chr3R 11656658 5` UTR CG42327 + chr3R_13_11655001 chr3R_11655001 RAL-306_125b 2598 chr3R 11670944 11671018 chr3R 11671072 11671146 11 127 4.5 5.5 5.0 1.8 202 chr3R 11670944 exon CG42327 + chr3R 11671045 intron CG42327 + chr3R 11671146 intron CG42327 + chr3R_11_11670001 chr3R_11670001 RAL-306_125b 2599 chr3R 11673885 11673955 chr3R 11674096 11674174 21 216 56.0 53.5 54.8 0.4 289 chr3R 11673885 3` UTR CG42327 + chr3R 11674030 intergenic CG42327 +,CG14715 + chr3R 11674174 intergenic CG14715 +,CG42327 + chr3R_21_11670001 chr3R_11670001 RAL-306_125b 2600 chr3R 11689674 11689748 chr3R 11689806 11689880 16 130 4.5 0.5 2.5 4.6 206 chr3R 11689674 intron CG6908 - chr3R 11689777 exon CG6908 - chr3R 11689880 exon CG6908 - chr3R_16_11685001 chr3R_11685001 RAL-306_125b 2601 chr3R 11689806 11689838 chr3R 11690797 11690829 9 988 0.5 11.0 5.8 1.3 1023 chr3R 11689806 exon CG6908 - chr3R 11690318 intergenic CG18765 -,CG6908 - chr3R 11690829 exon CG18765 - chr3R_9_11690001 chr3R_11690001 RAL-306_125b 2602 chr3R 11689840 11689876 chr3R 11690794 11690867 10 981 1.5 9.5 5.5 1.5 1027 chr3R 11689840 exon CG6908 - chr3R 11690354 intergenic CG18765 -,CG6908 - chr3R 11690867 exon CG18765 - chr3R_10_11690001 chr3R_11690001 RAL-306_125b 2603 chr3R 11694688 11694741 chr3R 11694831 11694884 26 141 0.5 15.0 7.8 3.0 196 chr3R 11694688 intergenic Fer3 - chr3R 11694786 intergenic Fer3 - chr3R 11694884 intergenic not near genes chr3R_26_11690001 chr3R_11690001 RAL-306_125b 2604 chr3R 11708586 11708658 chr3R 11708844 11708916 22 254 8.0 0.0 4.0 4.4 330 chr3R 11708586 intergenic not near genes chr3R 11708751 intergenic not near genes chr3R 11708916 intergenic not near genes chr3R_22_11705001 chr3R_11705001 RAL-306_125b 2605 chr3R 11733705 11733726 chr3R 11733867 11733888 8 162 12.5 9.0 10.8 0.7 183 chr3R 11733705 intergenic not near genes chr3R 11733796 intergenic not near genes chr3R 11733888 intergenic not near genes chr3R_8_11730001 chr3R_11730001 RAL-306_125b 2606 chr3R 11733728 11733769 chr3R 11733865 11733915 15 158 8.0 9.0 8.5 1.6 187 chr3R 11733728 intergenic not near genes chr3R 11733822 intergenic not near genes chr3R 11733915 intergenic not near genes chr3R_15_11730001 chr3R_11730001 RAL-306_125b 2607 chr3R 11757688 11757754 chr3R 11757838 11757905 27 142 8.0 6.0 7.0 3.4 217 chr3R 11757688 intron Lk6 - chr3R 11757796 intron Lk6 - chr3R 11757905 intron Lk6 - chr3R_27_11755001 chr3R_11755001 RAL-306_125b 2608 chr3R 11811047 11811065 chr3R 11811193 11811211 11 145 14.0 13.0 13.5 0.8 164 chr3R 11811047 5` UTR ClC-a - chr3R 11811129 5` UTR ClC-a - chr3R 11811211 intron ClC-a - chr3R_11_11810001 chr3R_11810001 RAL-306_125b 2609 chr3R 11811070 11811120 chr3R 11811191 11811245 19 139 4.5 12.0 8.2 2.1 175 chr3R 11811070 5` UTR ClC-a - chr3R 11811158 intron ClC-a - chr3R 11811245 intron ClC-a - chr3R_19_11810001 chr3R_11810001 RAL-306_125b 2610 chr3R 11841026 11841086 chr3R 11846257 11846327 BS 23 5238 3.0 12.0 7.5 2.7 5301 chr3R 11841026 intron CG6959 - chr3R 11843676 intron CG6959 - chr3R 11846327 intron CG6959 - chr3R_23_11840001 chr3R_11840001 RAL-306_125b 2611 chr3R 11914340 11914397 chr3R 11914464 11914532 30 134 7.0 8.0 7.5 3.5 192 chr3R 11914340 intron Cad87A - chr3R 11914436 intron Cad87A - chr3R 11914532 intron Cad87A - chr3R_30_11910001 chr3R_11910001 RAL-306_125b 2612 chr3R 11916384 11916408 chr3R 11916513 11916537 4 129 18.0 6.5 12.2 0.3 153 chr3R 11916384 intron Cad87A - chr3R 11916460 intron Cad87A - chr3R 11916537 intron Cad87A - chr3R_4_11915001 chr3R_11915001 RAL-306_125b 2613 chr3R 11916420 11916451 chr3R 11916509 11916580 12 118 8.5 6.5 7.5 1.4 160 chr3R 11916420 intron Cad87A - chr3R 11916500 intron Cad87A - chr3R 11916580 intron Cad87A - chr3R_12_11915001 chr3R_11915001 RAL-306_125b 2614 chr3R 11919272 11919337 chr3R 11919397 11919425 25 128 3.5 8.0 5.8 3.7 153 chr3R 11919272 intron Cad87A - chr3R 11919348 intron Cad87A - chr3R 11919425 intron Cad87A - chr3R_25_11915001 chr3R_11915001 RAL-306_125b 2615 chr3R 11930193 11930264 chr3R 11930327 11930393 23 133 8.0 7.5 7.8 2.6 200 chr3R 11930193 intron Cad87A - chr3R 11930293 intron Cad87A - chr3R 11930393 intron Cad87A - chr3R_23_11930001 chr3R_11930001 RAL-306_125b 2616 chr3R 11943143 11943220 chr3R 11943545 11943615 16 398 6.0 7.5 6.8 2.1 472 chr3R 11943143 intron Cad87A - chr3R 11943379 intron Cad87A - chr3R 11943615 intron Cad87A - chr3R_16_11940001 chr3R_11940001 RAL-306_125b 2617 chr3R 11945338 11945404 chr3R 11945483 11945552 23 146 7.0 5.0 6.0 3.3 214 chr3R 11945338 intron Cad87A - chr3R 11945445 intron Cad87A - chr3R 11945552 intron Cad87A - chr3R_23_11945001 chr3R_11945001 RAL-306_125b 2618 chr3R 11990607 11990681 chr3R 11990745 11990819 23 138 6.5 6.0 6.2 3.2 212 chr3R 11990607 intron mfas - chr3R 11990713 intron mfas - chr3R 11990819 intron mfas - chr3R_23_11990001 chr3R_11990001 RAL-306_125b 2619 chr3R 11998917 11998947 chr3R 11999082 11999112 14 164 12.0 6.5 9.2 1.4 195 chr3R 11998917 intron Tk - chr3R 11999014 intron Tk - chr3R 11999112 intron Tk - chr3R_14_11995001 chr3R_11995001 RAL-306_125b 2620 chr3R 12017005 12017021 chr3R 12017132 12017148 5 126 7.0 8.0 7.5 0.6 143 chr3R 12017005 5` UTR CG3313 - chr3R 12017076 intergenic CG3313 -,Spt3 + chr3R 12017148 intergenic Spt3 +,CG3313 - chr3R_5_12015001 chr3R_12015001 RAL-306_125b 2621 chr3R 12022836 12022903 chr3R 12025063 12025130 pogo 20 2226 9.5 9.0 9.2 2.0 2294 chr3R 12022836 intergenic not near genes chr3R 12023983 intergenic not near genes chr3R 12025130 intergenic not near genes chr3R_20_12020001 chr3R_12020001 RAL-306_125b 2622 chr3R 12029885 12029944 chr3R 12030022 12030081 18 136 6.5 7.5 7.0 2.2 196 chr3R 12029885 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029983 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030081 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_18_12025001 chr3R_12025001 RAL-306_125b 2623 chr3R 12045127 12045202 chr3R 12045253 12045328 18 126 10.5 5.0 7.8 2.0 201 chr3R 12045127 intergenic not near genes chr3R 12045228 intergenic not near genes chr3R 12045328 intergenic not near genes chr3R_18_12045001 chr3R_12045001 RAL-306_125b 2624 chr3R 12081963 12082013 chr3R 12082089 12082114 8 118 10.5 1.5 6.0 1.1 151 chr3R 12081963 intron CG14741 - chr3R 12082038 intron CG14741 - chr3R 12082114 intron CG14741 - chr3R_8_12080001 chr3R_12080001 RAL-306_125b 2625 chr3R 12111832 12111915 chr3R 12111967 12112040 16 132 0.5 5.0 2.8 4.2 208 chr3R 12111832 intergenic dpr17 + chr3R 12111936 intergenic not near genes chr3R 12112040 intergenic not near genes chr3R_16_12110001 chr3R_12110001 RAL-306_125b 2626 chr3R 12154053 12154065 chr3R 12154462 12154489 9 387 44.5 30.5 37.5 0.2 436 chr3R 12154053 intron dpr15 - chr3R 12154271 intron dpr15 - chr3R 12154489 intron dpr15 - chr3R_9_12150001 chr3R_12150001 RAL-306_125b 2627 chr3R 12169189 12169222 chr3R 12169317 12169350 7 128 17.0 11.5 14.2 0.5 161 chr3R 12169189 intergenic not near genes chr3R 12169270 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_7_12165001 chr3R_12165001 RAL-306_125b 2628 chr3R 12175183 12175258 chr3R 12175313 12175389 17 131 5.0 4.5 4.8 2.9 206 chr3R 12175183 intergenic not near genes chr3R 12175286 intergenic not near genes chr3R 12175389 intergenic not near genes chr3R_17_12175001 chr3R_12175001 RAL-306_125b 2629 chr3R 12183128 12183197 chr3R 12183264 12183333 29 135 7.0 8.0 7.5 3.4 205 chr3R 12183128 intergenic not near genes chr3R 12183230 intergenic not near genes chr3R 12183333 intergenic not near genes chr3R_29_12180001 chr3R_12180001 RAL-306_125b 2630 chr3R 12267825 12267885 chr3R 12267942 12268015 25 129 13.5 7.5 10.5 2.2 190 chr3R 12267825 intron svp + chr3R 12267920 intron svp + chr3R 12268015 intron svp + chr3R_25_12265001 chr3R_12265001 RAL-306_125b 2631 chr3R 12297606 12297633 chr3R 12297733 12297760 4 122 11.5 7.0 9.2 0.4 154 chr3R 12297606 intron svp + chr3R 12297683 intron svp + chr3R 12297760 intron svp + chr3R_4_12295001 chr3R_12295001 RAL-306_125b 2632 chr3R 12344079 12344154 chr3R 12344206 12344281 30 126 0.5 4.5 2.5 8.6 202 chr3R 12344079 intergenic not near genes chr3R 12344180 intergenic not near genes chr3R 12344281 intergenic not near genes chr3R_30_12340001 chr3R_12340001 RAL-306_125b 2633 chr3R 12392840 12392895 chr3R 12392990 12393045 17 149 9.0 12.0 10.5 1.5 205 chr3R 12392840 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392942 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393045 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_17_12390001 chr3R_12390001 RAL-306_125b 2634 chr3R 12404954 12405017 chr3R 12405226 12405289 25 271 6.5 13.0 9.8 2.3 335 chr3R 12404954 intron Cyp9f2 - chr3R 12405122 intron Cyp9f2 - chr3R 12405289 intron Cyp9f2 - chr3R_25_12405001 chr3R_12405001 RAL-306_125b 2635 chr3R 12524085 12524159 chr3R 12524215 12524289 16 130 5.5 6.5 6.0 2.3 204 chr3R 12524085 intron Octbeta3R - chr3R 12524187 intron Octbeta3R - chr3R 12524289 intron Octbeta3R - chr3R_16_12520001 chr3R_12520001 RAL-306_125b 2636 chr3R 12568463 12568504 chr3R 12568587 12568634 17 129 16.5 18.0 17.2 0.9 171 chr3R 12568463 intron Octbeta2R - chr3R 12568548 intron Octbeta2R - chr3R 12568634 intron Octbeta2R - chr3R_17_12565001 chr3R_12565001 RAL-306_125b 2637 chr3R 12568506 12568529 chr3R 12568575 12568640 15 116 13.5 15.5 14.5 1.0 134 chr3R 12568506 intron Octbeta2R - chr3R 12568573 intron Octbeta2R - chr3R 12568640 intron Octbeta2R - chr3R_15_12565001 chr3R_12565001 RAL-306_125b 2638 chr3R 12566714 12566774 chr3R 12570758 12570828 21 4051 52.5 9.5 31.0 0.7 4114 chr3R 12566714 intron Octbeta2R - chr3R 12568771 intron Octbeta2R - chr3R 12570828 intron Octbeta2R - chr3R_21_12565001 chr3R_12565001 RAL-306_125b 2639 chr3R 12566711 12566788 chr3R 12570830 12570832 4 4064 53.0 14.0 33.5 0.1 4121 chr3R 12566711 intron Octbeta2R - chr3R 12568772 intron Octbeta2R - chr3R 12570832 intron Octbeta2R - chr3R_4_12565001 chr3R_12565001 RAL-306_125b 2640 chr3R 12733446 12733487 chr3R 12733573 12733614 12 127 9.5 8.0 8.8 1.2 168 chr3R 12733446 intergenic not near genes chr3R 12733530 intergenic not near genes chr3R 12733614 intergenic not near genes chr3R_12_12730001 chr3R_12730001 RAL-306_125b 2641 chr3R 12738993 12739045 chr3R 12739119 12739159 5 121 6.0 12.0 9.0 0.5 166 chr3R 12738993 intergenic not near genes chr3R 12739076 intergenic not near genes chr3R 12739159 intergenic CG5724 + chr3R_5_12735001 chr3R_12735001 RAL-306_125b 2642 chr3R 12763066 12763151 chr3R 12763204 12763278 18 131 0.0 5.5 2.8 4.7 212 chr3R 12763066 intron beat-Vc - chr3R 12763172 intron beat-Vc - chr3R 12763278 intron beat-Vc - chr3R_18_12760001 chr3R_12760001 RAL-306_125b 2643 chr3R 12780261 12780294 chr3R 12780417 12780421 BS 9 157 4.5 0.0 2.2 2.8 160 chr3R 12780261 intron beat-Vc - chr3R 12780341 intron beat-Vc - chr3R 12780421 intron beat-Vc - chr3R_9_12780001 chr3R_12780001 RAL-306_125b 2644 chr3R 12786404 12786479 chr3R 12786814 12786887 23 408 4.5 6.0 5.2 3.7 483 chr3R 12786404 intergenic not near genes chr3R 12786646 intergenic not near genes chr3R 12786887 intergenic not near genes chr3R_23_12785001 chr3R_12785001 RAL-306_125b 2645 chr3R 12814193 12814266 chr3R 12814320 12814393 31 126 8.5 5.0 6.8 4.0 200 chr3R 12814193 intron CG31345 - chr3R 12814293 intron CG31345 - chr3R 12814393 intron CG31345 - chr3R_31_12810001 chr3R_12810001 RAL-306_125b 2646 chr3R 12864519 12864587 chr3R 12865054 12865102 roo 9 533 3.5 5.0 4.2 1.7 583 chr3R 12864519 intergenic not near genes chr3R 12864810 intergenic not near genes chr3R 12865102 intergenic not near genes chr3R_9_12860001 chr3R_12860001 RAL-306_125b 2647 chr3R 12920113 12920173 chr3R 12925366 12925426 copia 20 5251 5.5 8.0 6.8 2.6 5313 chr3R 12920113 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925426 intron beat-Vb + chr3R_20_12920001 chr3R_12920001 RAL-306_125b 2648 chr3R 12954760 12954822 chr3R 12954915 12954977 12 151 6.5 4.5 5.5 1.8 217 chr3R 12954760 intron grsm - chr3R 12954868 intron grsm - chr3R 12954977 intron grsm - chr3R_12_12950001 chr3R_12950001 RAL-306_125b 2649 chr3R 12972506 12972521 chr3R 12972695 12972710 5 189 18.0 6.5 12.2 0.4 204 chr3R 12972506 intron CG7381 - chr3R 12972608 intron CG7381 - chr3R 12972710 intron CG7381 - chr3R_5_12970001 chr3R_12970001 RAL-306_125b 2650 chr3R 12972526 12972582 chr3R 12972694 12972771 23 188 6.5 6.0 6.2 3.2 245 chr3R 12972526 intron CG7381 - chr3R 12972648 intron CG7381 - chr3R 12972771 intron CG7381 - chr3R_23_12970001 chr3R_12970001 RAL-306_125b 2651 chr3R 13026993 13027006 chr3R 13027124 13027137 10 131 15.0 17.0 16.0 0.6 144 chr3R 13026993 3` UTR CG12360 - chr3R 13027065 3` UTR CG12360 - chr3R 13027137 3` UTR CG12360 - chr3R_10_13025001 chr3R_13025001 RAL-306_125b 2652 chr3R 13027007 13027025 chr3R 13027084 13027154 12 126 12.0 7.5 9.8 1.1 147 chr3R 13027007 3` UTR CG12360 - chr3R 13027080 3` UTR CG12360 - chr3R 13027154 3` UTR CG12360 - chr3R_12_13025001 chr3R_13025001 RAL-306_125b 2653 chr3R 13059915 13059977 chr3R 13060160 13060222 22 242 4.0 9.5 6.8 2.8 307 chr3R 13059915 intron sim + chr3R 13060068 intron sim + chr3R 13060222 intron sim + chr3R_22_13060001 chr3R_13060001 RAL-306_125b 2654 chr3R 13066955 13067008 chr3R 13067091 13067145 27 136 7.5 9.0 8.2 2.9 190 chr3R 13066955 intron sim + chr3R 13067050 intron sim + chr3R 13067145 intron sim + chr3R_27_13065001 chr3R_13065001 RAL-306_125b 2655 chr3R 13075309 13075360 chr3R 13075440 13075491 22 131 11.5 9.0 10.2 2.0 182 chr3R 13075309 intron sim + chr3R 13075400 intron sim + chr3R 13075491 intron sim + chr3R_22_13075001 chr3R_13075001 RAL-306_125b 2656 chr3R 13103969 13104001 chr3R 13104096 13104128 14 126 7.0 0.0 3.5 3.1 159 chr3R 13103969 intron timeout + chr3R 13104048 intron timeout + chr3R 13104128 intron timeout + chr3R_14_13100001 chr3R_13100001 RAL-306_125b 2657 chr3R 13120721 13120797 chr3R 13120848 13120924 19 124 9.5 8.0 8.8 1.9 203 chr3R 13120721 intron timeout + chr3R 13120822 intron timeout + chr3R 13120924 intron timeout + chr3R_19_13120001 chr3R_13120001 RAL-306_125b 2658 chr3R 13135784 13135849 chr3R 13138009 13138074 pogo 22 2224 7.0 7.0 7.0 2.8 2290 chr3R 13135784 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136929 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138074 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_22_13135001 chr3R_13135001 RAL-306_125b 2659 chr3R 13142990 13143062 chr3R 13148616 13148678 mdg3 30 5623 8.0 5.0 6.5 4.0 5688 chr3R 13142990 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145834 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148678 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_30_13145001 chr3R_13145001 RAL-306_125b 2660 chr3R 13205366 13205429 chr3R 13205497 13205560 15 127 8.5 10.5 9.5 1.4 194 chr3R 13205366 intergenic not near genes chr3R 13205463 intergenic not near genes chr3R 13205560 intergenic not near genes chr3R_15_13205001 chr3R_13205001 RAL-306_125b 2661 chr3R 13249564 13249594 chr3R 13249728 13249733 7 160 8.5 2.5 5.5 1.1 169 chr3R 13249564 intron Ace - chr3R 13249648 intron Ace - chr3R 13249733 intron Ace - chr3R_7_13245001 chr3R_13245001 RAL-306_125b 2662 chr3R 13274184 13274238 chr3R 13274313 13274367 20 125 13.5 10.5 12.0 1.5 183 chr3R 13274184 intergenic not near genes chr3R 13274276 intergenic not near genes chr3R 13274367 intergenic not near genes chr3R_20_13270001 chr3R_13270001 RAL-306_125b 2663 chr3R 13313386 13313458 chr3R 13313527 13313573 15 135 7.5 2.5 5.0 2.5 187 chr3R 13313386 intergenic CG44142 - chr3R 13313480 intergenic CG44142 - chr3R 13313573 intergenic CG44142 - chr3R_15_13310001 chr3R_13310001 RAL-306_125b 2664 chr3R 13314054 13314117 chr3R 13318893 13318955 Doc 19 4838 10.0 12.0 11.0 1.6 4901 chr3R 13314054 intergenic not near genes chr3R 13316504 intergenic not near genes chr3R 13318955 intergenic CG45080 - chr3R_19_13315001 chr3R_13315001 RAL-306_125b 2665 chr3R 13391228 13391248 chr3R 13391365 13391385 6 137 12.0 5.5 8.8 0.6 157 chr3R 13391228 intron CCHa2 - chr3R 13391306 intron CCHa2 - chr3R 13391385 intron CCHa2 - chr3R_6_13390001 chr3R_13390001 RAL-306_125b 2666 chr3R 13391251 13391295 chr3R 13391358 13391432 16 135 3.5 5.0 4.2 3.1 181 chr3R 13391251 intron CCHa2 - chr3R 13391342 intron CCHa2 - chr3R 13391432 intron CCHa2 - chr3R_16_13390001 chr3R_13390001 RAL-306_125b 2667 chr3R 13496580 13496662 chr3R 13496709 13496791 11 129 3.0 4.0 3.5 2.4 211 chr3R 13496580 intergenic not near genes chr3R 13496686 intergenic not near genes chr3R 13496791 intergenic not near genes chr3R_11_13495001 chr3R_13495001 RAL-306_125b 2668 chr3R 13505442 13505501 chr3R 13505759 13505839 14 330 7.5 5.0 6.2 1.9 397 chr3R 13505442 intergenic not near genes chr3R 13505640 intergenic not near genes chr3R 13505839 intergenic not near genes chr3R_14_13505001 chr3R_13505001 RAL-306_125b 2669 chr3R 13505817 13505863 chr3R 13505943 13505964 13 123 6.0 5.5 5.8 1.9 147 chr3R 13505817 intergenic not near genes chr3R 13505890 intergenic not near genes chr3R 13505964 intergenic not near genes chr3R_13_13505001 chr3R_13505001 RAL-306_125b 2670 chr3R 13540439 13540519 chr3R 13540565 13540619 12 117 9.0 7.5 8.2 1.3 180 chr3R 13540439 intergenic not near genes chr3R 13540529 intergenic not near genes chr3R 13540619 intergenic not near genes chr3R_12_13540001 chr3R_13540001 RAL-306_125b 2671 chr3R 13571329 13571381 chr3R 13571458 13571532 13 141 5.5 6.5 6.0 1.9 203 chr3R 13571329 intergenic not near genes chr3R 13571430 intergenic not near genes chr3R 13571532 intergenic not near genes chr3R_13_13570001 chr3R_13570001 RAL-306_125b 2672 chr3R 13580799 13580828 chr3R 13580926 13580955 13 126 18.5 17.5 18.0 0.7 156 chr3R 13580799 intergenic not near genes chr3R 13580877 intergenic not near genes chr3R 13580955 intergenic not near genes chr3R_13_13580001 chr3R_13580001 RAL-306_125b 2673 chr3R 13599167 13599237 chr3R 13599328 13599398 26 161 8.0 6.5 7.2 3.2 231 chr3R 13599167 intergenic not near genes chr3R 13599282 intergenic not near genes chr3R 13599398 intergenic not near genes chr3R_26_13595001 chr3R_13595001 RAL-306_125b 2674 chr3R 13600733 13600796 chr3R 13600884 13600947 12 146 4.5 6.0 5.2 1.9 214 chr3R 13600733 intergenic not near genes chr3R 13600840 intergenic not near genes chr3R 13600947 intergenic not near genes chr3R_12_13600001 chr3R_13600001 RAL-306_125b 2675 chr3R 13602138 13602193 chr3R 13602265 13602320 19 126 3.0 4.0 3.5 4.2 182 chr3R 13602138 intergenic not near genes chr3R 13602229 intergenic not near genes chr3R 13602320 intergenic not near genes chr3R_19_13600001 chr3R_13600001 RAL-306_125b 2676 chr3R 13603012 13603073 chr3R 13603153 13603214 22 139 10.0 9.0 9.5 2.1 202 chr3R 13603012 intergenic not near genes chr3R 13603113 intergenic not near genes chr3R 13603214 intergenic not near genes chr3R_22_13600001 chr3R_13600001 RAL-306_125b 2677 chr3R 13607130 13607164 chr3R 13607285 13607319 12 154 10.5 0.0 5.2 1.9 189 chr3R 13607130 3` UTR CG9759 - chr3R 13607224 3` UTR CG9759 - chr3R 13607319 3` UTR CG9759 - chr3R_12_13605001 chr3R_13605001 RAL-306_125b 2678 chr3R 13616091 13616136 chr3R 13616224 13616250 5 124 4.0 4.5 4.2 1.0 159 chr3R 13616091 exon CG9269 + chr3R 13616170 exon CG9269 + chr3R 13616250 exon CG9269 + chr3R_5_13615001 chr3R_13615001 RAL-306_125b 2679 chr3R 13630685 13630762 chr3R 13630883 13630960 18 197 4.0 3.0 3.5 4.0 275 chr3R 13630685 intergenic CR45594 - chr3R 13630822 intergenic CR45594 - chr3R 13630960 3` UTR CR45594 - chr3R_18_13630001 chr3R_13630001 RAL-306_125b 2680 chr3R 13669045 13669118 chr3R 13669191 13669264 32 146 6.5 10.0 8.2 3.5 219 chr3R 13669045 intron Task6 - chr3R 13669154 intron Task6 - chr3R 13669264 intron Task6 - chr3R_32_13665001 chr3R_13665001 RAL-306_125b 2681 chr3R 13745379 13745430 chr3R 13745547 13745598 5 168 6.0 2.0 4.0 1.0 219 chr3R 13745379 intron CG34383 + chr3R 13745488 intron CG34383 + chr3R 13745598 intron CG34383 + chr3R_5_13745001 chr3R_13745001 RAL-306_125b 2682 chr3R 13782030 13782078 chr3R 13782161 13782176 17 128 5.0 11.5 8.2 1.8 146 chr3R 13782030 exon CG9286 + chr3R 13782103 intergenic CG9286 +,Dip-B + chr3R 13782176 intergenic CG9286 +,Dip-B + chr3R_17_13780001 chr3R_13780001 RAL-306_125b 2683 chr3R 13831780 13831813 chr3R 13831931 13831973 4 151 4.5 0.0 2.2 1.2 193 chr3R 13831780 intergenic not near genes chr3R 13831876 intergenic not near genes chr3R 13831973 intergenic not near genes chr3R_4_13830001 chr3R_13830001 RAL-306_125b 2684 chr3R 13863635 13863704 chr3R 13863773 13863842 24 136 11.5 10.5 11.0 2.0 207 chr3R 13863635 intergenic not near genes chr3R 13863738 intergenic not near genes chr3R 13863842 intergenic not near genes chr3R_24_13860001 chr3R_13860001 RAL-306_125b 2685 chr3R 13880503 13880578 chr3R 13880674 13880719 20 167 7.5 9.0 8.2 2.2 216 chr3R 13880503 intergenic not near genes chr3R 13880611 intergenic not near genes chr3R 13880719 intergenic not near genes chr3R_20_13880001 chr3R_13880001 RAL-306_125b 2686 chr3R 13890799 13890849 chr3R 13891112 13891162 15 313 4.5 6.5 5.5 2.3 363 chr3R 13890799 intergenic not near genes chr3R 13890980 intergenic not near genes chr3R 13891162 intergenic not near genes chr3R_15_13890001 chr3R_13890001 RAL-306_125b 2687 chr3R 13910631 13910661 chr3R 13910771 13910801 17 139 3.0 6.0 4.5 3.1 170 chr3R 13910631 intergenic not near genes chr3R 13910716 intergenic not near genes chr3R 13910801 intergenic not near genes chr3R_17_13910001 chr3R_13910001 RAL-306_125b 2688 chr3R 13948182 13948243 chr3R 13948324 13948383 9 140 3.0 4.5 3.8 1.9 201 chr3R 13948182 intergenic CG31517 + chr3R 13948282 intergenic CG31517 + chr3R 13948383 intergenic CG31517 + chr3R_9_13945001 chr3R_13945001 RAL-306_125b 2689 chr3R 13975325 13975403 chr3R 13975455 13975533 25 128 6.5 4.0 5.2 4.0 208 chr3R 13975325 intron rdx - chr3R 13975429 intron rdx - chr3R 13975533 intron rdx - chr3R_25_13975001 chr3R_13975001 RAL-306_125b 2690 chr3R 14014277 14014304 chr3R 14014431 14014493 4 180 9.0 0.0 4.5 0.7 216 chr3R 14014277 intron rdx - chr3R 14014385 intron rdx - chr3R 14014493 intron rdx - chr3R_4_14010001 chr3R_14010001 RAL-306_125b 2691 chr3R 14021598 14021677 chr3R 14023465 14023544 S-element 32 1863 9.5 8.5 9.0 3.2 1946 chr3R 14021598 intron rdx - chr3R 14022571 intron rdx - chr3R 14023544 intron rdx - chr3R_32_14020001 chr3R_14020001 RAL-306_125b 2692 chr3R 14037533 14037588 chr3R 14037664 14037719 17 127 11.5 8.5 10.0 1.5 186 chr3R 14037533 intergenic not near genes chr3R 14037626 intergenic not near genes chr3R 14037719 intergenic not near genes chr3R_17_14035001 chr3R_14035001 RAL-306_125b 2693 chr3R 14047728 14047802 chr3R 14047869 14047912 18 139 2.0 5.0 3.5 4.0 184 chr3R 14047728 intergenic not near genes chr3R 14047820 intergenic not near genes chr3R 14047912 intergenic not near genes chr3R_18_14045001 chr3R_14045001 RAL-306_125b 2694 chr3R 14062804 14062864 chr3R 14062930 14062991 28 127 10.5 11.5 11.0 2.3 187 chr3R 14062804 intron foxo + chr3R 14062898 intron foxo + chr3R 14062991 intron foxo + chr3R_28_14060001 chr3R_14060001 RAL-306_125b 2695 chr3R 14067092 14067154 chr3R 14067221 14067272 23 123 5.5 0.0 2.8 6.1 180 chr3R 14067092 exon foxo + chr3R 14067182 intron foxo + chr3R 14067272 intron foxo + chr3R_23_14065001 chr3R_14065001 RAL-306_125b 2696 chr3R 14083355 14083394 chr3R 14083506 14083535 10 150 16.0 0.0 8.0 1.1 180 chr3R 14083355 intron foxo + chr3R 14083445 intron foxo + chr3R 14083535 intron foxo + chr3R_10_14080001 chr3R_14080001 RAL-306_125b 2697 chr3R 14117408 14117462 chr3R 14117529 14117588 11 121 8.5 12.0 10.2 1.0 180 chr3R 14117408 intron Kif19A - chr3R 14117498 intron Kif19A - chr3R 14117588 intron Kif19A - chr3R_11_14115001 chr3R_14115001 RAL-306_125b 2698 chr3R 14132416 14132435 chr3R 14132579 14132598 5 163 1.5 10.5 6.0 0.7 182 chr3R 14132416 intergenic CG14356 - chr3R 14132507 intergenic CG14356 - chr3R 14132598 intergenic not near genes chr3R_5_14130001 chr3R_14130001 RAL-306_125b 2699 chr3R 14136138 14136267 chr3R 14136265 14136393 8 132 0.0 0.0 0.0 8.0 255 chr3R 14136138 intergenic not near genes chr3R 14136266 intergenic not near genes chr3R 14136393 intergenic not near genes chr3R_8_14135001 chr3R_14135001 RAL-306_125b 2700 chr3R 14180776 14180843 chr3R 14185591 14185658 F-element 10 4815 9.5 7.0 8.2 1.1 4882 chr3R 14180776 intron Dop1R1 - chr3R 14183217 intron Dop1R1 - chr3R 14185658 intron Dop1R1 - chr3R_10_14180001 chr3R_14180001 RAL-306_125b 2701 chr3R 14194433 14194458 chr3R 14203612 14203637 roo 15 9178 10.5 5.0 7.8 1.7 9204 chr3R 14194433 intron Dop1R1 - chr3R 14199035 intron Dop1R1 - chr3R 14203637 intron Dop1R1 - chr3R_15_14195001 chr3R_14195001 RAL-306_125b 2702 chr3R 14246362 14246375 chr3R 14247908 14247921 jockey 4 1546 13.0 10.0 11.5 0.3 1559 chr3R 14246362 intergenic not near genes chr3R 14247142 intergenic not near genes chr3R 14247921 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-306_125b 2703 chr3R 14246391 14246417 chr3R 14247896 14247963 jockey 6 1532 6.5 7.5 7.0 0.8 1572 chr3R 14246391 intergenic not near genes chr3R 14247177 intergenic not near genes chr3R 14247963 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-306_125b 2704 chr3R 14253655 14253719 chr3R 14253784 14253848 22 125 6.0 6.0 6.0 3.1 193 chr3R 14253655 intron Aats-met - chr3R 14253752 intron Aats-met - chr3R 14253848 intron Aats-met - chr3R_22_14250001 chr3R_14250001 RAL-306_125b 2705 chr3R 14256731 14256756 chr3R 14256867 14256892 11 134 7.5 13.0 10.2 1.0 161 chr3R 14256731 intron,exon Aats-met -,CG43179 + chr3R 14256812 intron,3` UTR Aats-met -,CG43179 + chr3R 14256892 intron,3` UTR Aats-met -,CG43179 + chr3R_11_14255001 chr3R_14255001 RAL-306_125b 2706 chr3R 14339568 14339642 chr3R 14339764 14339838 23 194 7.0 6.0 6.5 3.1 270 chr3R 14339568 intron NK7.1 - chr3R 14339703 intron NK7.1 - chr3R 14339838 intron NK7.1 - chr3R_23_14335001 chr3R_14335001 RAL-306_125b 2707 chr3R 14364024 14364085 chr3R 14364138 14364211 22 116 8.0 11.5 9.8 2.0 187 chr3R 14364024 intron NK7.1 - chr3R 14364118 intron NK7.1 - chr3R 14364211 intron NK7.1 - chr3R_22_14360001 chr3R_14360001 RAL-306_125b 2708 chr3R 14401007 14401069 chr3R 14401141 14401200 17 134 4.5 8.0 6.2 2.4 193 chr3R 14401007 intron cv-c - chr3R 14401104 intron cv-c - chr3R 14401200 intron cv-c - chr3R_17_14400001 chr3R_14400001 RAL-306_125b 2709 chr3R 14440686 14440749 chr3R 14440812 14440875 15 125 1.5 16.0 8.8 1.5 189 chr3R 14440686 intron cv-c - chr3R 14440780 intron cv-c - chr3R 14440875 intron cv-c - chr3R_15_14440001 chr3R_14440001 RAL-306_125b 2710 chr3R 14504972 14504989 chr3R 14505098 14505104 roo 5 123 14.0 18.5 16.2 0.3 132 chr3R 14504972 intron CR44177 + chr3R 14505038 intron CR44177 + chr3R 14505104 intron CR44177 + chr3R_5_14505001 chr3R_14505001 RAL-306_125b 2711 chr3R 14520402 14520461 chr3R 14520552 14520611 23 149 6.0 10.0 8.0 2.6 209 chr3R 14520402 intron Pde6 - chr3R 14520506 intron Pde6 - chr3R 14520611 intron Pde6 - chr3R_23_14520001 chr3R_14520001 RAL-306_125b 2712 chr3R 14548990 14549008 chr3R 14549127 14549145 9 136 18.0 2.5 10.2 0.8 155 chr3R 14548990 intron Pde6 - chr3R 14549068 intron Pde6 - chr3R 14549145 intron Pde6 - chr3R_9_14545001 chr3R_14545001 RAL-306_125b 2713 chr3R 14556546 14556600 chr3R 14556679 14556733 20 133 6.5 9.0 7.8 2.3 187 chr3R 14556546 intron Pde6 - chr3R 14556640 intron Pde6 - chr3R 14556733 intron Pde6 - chr3R_20_14555001 chr3R_14555001 RAL-306_125b 2714 chr3R 14560641 14560689 chr3R 14560886 14560934 14 245 1.0 10.5 5.8 2.1 293 chr3R 14560641 intergenic CG14850 + chr3R 14560788 intergenic CG14850 + chr3R 14560934 5` UTR CG14850 + chr3R_14_14560001 chr3R_14560001 RAL-306_125b 2715 chr3R 14563977 14563991 chr3R 14564127 14564141 9 150 0.0 18.5 9.2 0.9 164 chr3R 14563977 intergenic CG8087 - chr3R 14564059 intergenic CG8087 - chr3R 14564141 intergenic CG8087 - chr3R_9_14560001 chr3R_14560001 RAL-306_125b 2716 chr3R 14589006 14589072 chr3R 14589157 14589223 20 150 7.0 7.5 7.2 2.4 217 chr3R 14589006 intron stumps + chr3R 14589114 intron stumps + chr3R 14589223 intron stumps + chr3R_20_14585001 chr3R_14585001 RAL-306_125b 2717 chr3R 14608421 14608477 chr3R 14608563 14608619 15 142 5.5 8.5 7.0 1.9 198 chr3R 14608421 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608619 intergenic not near genes chr3R_15_14605001 chr3R_14605001 RAL-306_125b 2718 chr3R 14616983 14617057 chr3R 14617109 14617153 21 122 4.5 4.5 4.5 3.8 170 chr3R 14616983 exon CG14853 + chr3R 14617068 intron CG14853 + chr3R 14617153 intron CG14853 + chr3R_21_14615001 chr3R_14615001 RAL-306_125b 2719 chr3R 14662268 14662332 chr3R 14662399 14662463 15 128 11.5 6.5 9.0 1.5 195 chr3R 14662268 exon Rad17 - chr3R 14662366 intron Rad17 - chr3R 14662463 exon Rad17 - chr3R_15_14660001 chr3R_14660001 RAL-306_125b 2720 chr3R 14682884 14682893 chr3R 14683004 14683033 4 134 6.0 12.5 9.2 0.4 149 chr3R 14682884 intron Meltrin - chr3R 14682958 intron Meltrin - chr3R 14683033 intron Meltrin - chr3R_4_14680001 chr3R_14680001 RAL-306_125b 2721 chr3R 14764521 14764588 chr3R 14764669 14764738 13 150 5.5 6.0 5.8 1.9 217 chr3R 14764521 intron jvl + chr3R 14764630 intron jvl + chr3R 14764738 intron jvl + chr3R_13_14760001 chr3R_14760001 RAL-306_125b 2722 chr3R 14923675 14923689 chr3R 14923801 14923815 6 126 10.5 9.5 10.0 0.5 140 chr3R 14923675 3` UTR CR45598 - chr3R 14923745 3` UTR CR45598 - chr3R 14923815 intergenic CR45598 - chr3R_6_14920001 chr3R_14920001 RAL-306_125b 2723 chr3R 14923690 14923737 chr3R 14923790 14923864 8 119 8.5 8.5 8.5 0.8 174 chr3R 14923690 3` UTR CR45598 - chr3R 14923777 intergenic CR45598 - chr3R 14923864 intergenic CR45598 - chr3R_8_14920001 chr3R_14920001 RAL-306_125b 2724 chr3R 14944857 14944896 chr3R 14944983 14945029 15 130 12.5 9.0 10.8 1.3 172 chr3R 14944857 intergenic not near genes chr3R 14944943 intergenic not near genes chr3R 14945029 intergenic not near genes chr3R_15_14940001 chr3R_14940001 RAL-306_125b 2725 chr3R 14946002 14946030 chr3R 14946197 14946225 10 194 19.5 11.5 15.5 0.6 223 chr3R 14946002 intergenic not near genes chr3R 14946114 intergenic not near genes chr3R 14946225 intergenic not near genes chr3R_10_14945001 chr3R_14945001 RAL-306_125b 2726 chr3R 14946032 14946071 chr3R 14946190 14946266 17 192 10.5 11.0 10.8 1.4 234 chr3R 14946032 intergenic not near genes chr3R 14946149 intergenic not near genes chr3R 14946266 intergenic not near genes chr3R_17_14945001 chr3R_14945001 RAL-306_125b 2727 chr3R 14995650 14995722 chr3R 14995785 14995857 13 129 9.0 3.0 6.0 1.9 207 chr3R 14995650 intergenic not near genes chr3R 14995754 intergenic not near genes chr3R 14995857 intergenic not near genes chr3R_13_14995001 chr3R_14995001 RAL-306_125b 2728 chr3R 15026281 15026345 chr3R 15026417 15026461 18 134 7.0 8.0 7.5 2.1 180 chr3R 15026281 intergenic not near genes chr3R 15026371 intergenic not near genes chr3R 15026461 intergenic not near genes chr3R_18_15025001 chr3R_15025001 RAL-306_125b 2729 chr3R 15041352 15041417 chr3R 15045186 15045251 Doc 12 3834 0.0 3.0 1.5 4.8 3899 chr3R 15041352 intergenic not near genes chr3R 15043302 intergenic not near genes chr3R 15045251 intergenic not near genes chr3R_12_15040001 chr3R_15040001 RAL-306_125b 2730 chr3R 15059231 15059481 chr3R 15059475 15059618 BS 14 225 0.0 0.0 0.0 14.0 387 chr3R 15059231 intron dpr9 - chr3R 15059424 intron dpr9 - chr3R 15059618 intron dpr9 - chr3R_14_15055001 chr3R_15055001 RAL-306_125b 2731 chr3R 15078288 15078362 chr3R 15078422 15078492 22 130 7.5 11.0 9.2 2.2 204 chr3R 15078288 intergenic CG6974 - chr3R 15078390 intergenic CG6974 - chr3R 15078492 intergenic CG6974 - chr3R_22_15075001 chr3R_15075001 RAL-306_125b 2732 chr3R 15079764 15079832 chr3R 15080055 15080123 pogo 20 288 9.5 7.0 8.2 2.2 359 chr3R 15079764 3` UTR CG6966 - chr3R 15079944 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_20_15075001 chr3R_15075001 RAL-306_125b 2733 chr3R 15088046 15088104 chr3R 15088193 15088252 16 145 5.5 6.0 5.8 2.4 206 chr3R 15088046 intron CG6966 - chr3R 15088149 intron CG6966 - chr3R 15088252 intron CG6966 - chr3R_16_15085001 chr3R_15085001 RAL-306_125b 2734 chr3R 15102460 15102522 chr3R 15109765 15109827 412 22 7304 8.5 8.5 8.5 2.3 7367 chr3R 15102460 intron CG42788 - chr3R 15106144 intron CG42788 - chr3R 15109827 intron CG42788 - chr3R_22_15105001 chr3R_15105001 RAL-306_125b 2735 chr3R 15132016 15132070 chr3R 15135126 15135179 Juan 21 3110 8.0 8.0 8.0 2.3 3163 chr3R 15132016 intergenic CG42788 - chr3R 15133598 intergenic not near genes chr3R 15135179 3` UTR CG6912 - chr3R_21_15130001 chr3R_15130001 RAL-306_125b 2736 chr3R 15162507 15162571 chr3R 15167324 15167371 F-element 23 4814 11.5 11.0 11.2 1.9 4864 chr3R 15162507 intron Gyc88E + chr3R 15164939 intron Gyc88E + chr3R 15167371 intron Gyc88E + chr3R_23_15160001 chr3R_15160001 RAL-306_125b 2737 chr3R 15406097 15406154 chr3R 15406228 15406285 17 131 12.5 4.0 8.2 1.8 188 chr3R 15406097 intron CG6125 - chr3R 15406191 intron CG6125 - chr3R 15406285 intron CG6125 - chr3R_17_15405001 chr3R_15405001 RAL-306_125b 2738 chr3R 15594660 15594670 chr3R 15594781 15594803 10 132 0.0 12.0 6.0 1.4 143 chr3R 15594660 intergenic not near genes chr3R 15594732 intergenic not near genes chr3R 15594803 intergenic not near genes chr3R_10_15590001 chr3R_15590001 RAL-306_125b 2739 chr3R 15601139 15601192 chr3R 15608696 15608764 412 15 7567 8.0 8.0 8.0 1.7 7625 chr3R 15601139 intergenic not near genes chr3R 15604952 intergenic not near genes chr3R 15608764 intergenic not near genes chr3R_15_15600001 chr3R_15600001 RAL-306_125b 2740 chr3R 15611863 15611950 chr3R 15612008 15612037 9 130 0.0 6.5 3.2 2.1 174 chr3R 15611863 intergenic not near genes chr3R 15611950 intergenic not near genes chr3R 15612037 intergenic not near genes chr3R_9_15610001 chr3R_15610001 RAL-306_125b 2741 chr3R 15618697 15618753 chr3R 15626221 15626277 blood 8 7522 5.0 6.0 5.5 1.2 7580 chr3R 15618697 intergenic not near genes chr3R 15622487 intergenic not near genes chr3R 15626277 intergenic not near genes chr3R_8_15620001 chr3R_15620001 RAL-306_125b 2742 chr3R 15635182 15635238 chr3R 15635353 15635400 12 165 0.0 13.5 6.8 1.5 218 chr3R 15635182 intergenic CG43335 + chr3R 15635291 intergenic CG43335 + chr3R 15635400 intergenic CG43335 + chr3R_12_15635001 chr3R_15635001 RAL-306_125b 2743 chr3R 15646742 15646800 chr3R 15646875 15646933 16 133 6.5 4.0 5.2 2.6 191 chr3R 15646742 intergenic not near genes chr3R 15646838 intergenic not near genes chr3R 15646933 intergenic not near genes chr3R_16_15645001 chr3R_15645001 RAL-306_125b 2744 chr3R 15691131 15691319 chr3R 15691286 15691406 29 144 0.5 0.0 0.2 24.2 275 chr3R 15691131 intergenic not near genes chr3R 15691268 intergenic not near genes chr3R 15691406 intergenic not near genes chr3R_29_15690001 chr3R_15690001 RAL-306_125b 2745 chr3R 15702838 15702889 chr3R 15703061 15703129 5 237 0.0 9.0 4.5 0.9 291 chr3R 15702838 intergenic not near genes chr3R 15702984 intergenic not near genes chr3R 15703129 intergenic not near genes chr3R_5_15700001 chr3R_15700001 RAL-306_125b 2746 chr3R 15735192 15735232 chr3R 15739962 15740002 F-element 11 4770 7.0 5.0 6.0 1.6 4810 chr3R 15735192 intergenic not near genes chr3R 15737597 intergenic not near genes chr3R 15740002 intergenic not near genes chr3R_11_15735001 chr3R_15735001 RAL-306_125b 2747 chr3R 15786193 15786249 chr3R 15786551 15786607 10 358 8.5 0.0 4.2 1.9 414 chr3R 15786193 intergenic not near genes chr3R 15786400 intergenic CG9590 + chr3R 15786607 intergenic CG9590 + chr3R_10_15785001 chr3R_15785001 RAL-306_125b 2748 chr3R 15868894 15868908 chr3R 15869024 15869038 12 130 19.0 0.0 9.5 1.1 144 chr3R 15868894 intron CG31183 - chr3R 15868966 intron CG31183 - chr3R 15869038 intron CG31183 - chr3R_12_15865001 chr3R_15865001 RAL-306_125b 2749 chr3R 15891305 15891379 chr3R 15891443 15891517 21 136 8.5 13.0 10.8 1.8 212 chr3R 15891305 intron CG14877 - chr3R 15891411 intron CG14877 - chr3R 15891517 intron CG14877 - chr3R_21_15890001 chr3R_15890001 RAL-306_125b 2750 chr3R 15924875 15924890 chr3R 15925013 15925018 6 136 17.0 8.5 12.8 0.4 143 chr3R 15924875 intron CG4221 + chr3R 15924946 intron CG4221 + chr3R 15925018 intron CG4221 + chr3R_6_15920001 chr3R_15920001 RAL-306_125b 2751 chr3R 16033366 16033419 chr3R 16033497 16033550 17 128 11.0 11.5 11.2 1.4 184 chr3R 16033366 intron pnr + chr3R 16033458 intron pnr + chr3R 16033550 intron pnr + chr3R_17_16030001 chr3R_16030001 RAL-306_125b 2752 chr3R 16048825 16048878 chr3R 16048942 16049018 14 133 6.5 5.5 6.0 2.0 193 chr3R 16048825 intron ird5 - chr3R 16048922 intron ird5 - chr3R 16049018 intron ird5 - chr3R_14_16045001 chr3R_16045001 RAL-306_125b 2753 chr3R 16218836 16218874 chr3R 16219035 16219079 12 206 8.0 6.5 7.2 1.5 243 chr3R 16218836 intergenic not near genes chr3R 16218958 intergenic not near genes chr3R 16219079 intergenic not near genes chr3R_12_16215001 chr3R_16215001 RAL-306_125b 2754 chr3R 16225047 16225116 chr3R 16225182 16225251 28 134 5.0 0.5 2.8 7.4 204 chr3R 16225047 intergenic not near genes chr3R 16225149 intergenic not near genes chr3R 16225251 intergenic tara + chr3R_28_16225001 chr3R_16225001 RAL-306_125b 2755 chr3R 16226762 16226774 chr3R 16226890 16226900 7 127 8.5 10.0 9.2 0.7 138 chr3R 16226762 intron tara + chr3R 16226831 intron tara + chr3R 16226900 intron tara + chr3R_7_16225001 chr3R_16225001 RAL-306_125b 2756 chr3R 16246479 16246551 chr3R 16246605 16246677 9 126 5.5 9.5 7.5 1.1 198 chr3R 16246479 intron tara + chr3R 16246578 intron tara + chr3R 16246677 intron tara + chr3R_9_16245001 chr3R_16245001 RAL-306_125b 2757 chr3R 16260769 16260843 chr3R 16260900 16260973 6 130 1.5 7.5 4.5 1.1 204 chr3R 16260769 intergenic tara + chr3R 16260871 intergenic bor - chr3R 16260973 intergenic bor - chr3R_6_16260001 chr3R_16260001 RAL-306_125b 2758 chr3R 16429490 16429503 chr3R 16429616 16429618 4 123 9.0 11.0 10.0 0.4 128 chr3R 16429490 intergenic not near genes chr3R 16429554 intergenic not near genes chr3R 16429618 intergenic not near genes chr3R_4_16425001 chr3R_16425001 RAL-306_125b 2759 chr3R 16519890 16519924 chr3R 16520033 16520067 8 141 7.5 4.5 6.0 1.1 177 chr3R 16519890 intron CG42342 + chr3R 16519978 intron CG42342 + chr3R 16520067 intron CG42342 + chr3R_8_16515001 chr3R_16515001 RAL-306_125b 2760 chr3R 16529185 16529203 chr3R 16529453 16529471 9 268 18.5 6.5 12.5 0.7 286 chr3R 16529185 intron CG42342 + chr3R 16529328 intron CG42342 + chr3R 16529471 intron CG42342 + chr3R_9_16525001 chr3R_16525001 RAL-306_125b 2761 chr3R 16529204 16529251 chr3R 16529451 16529513 23 265 9.5 6.0 7.8 2.6 309 chr3R 16529204 intron CG42342 + chr3R 16529358 intron CG42342 + chr3R 16529513 intron CG42342 + chr3R_23_16525001 chr3R_16525001 RAL-306_125b 2762 chr3R 16530969 16531044 chr3R 16531111 16531186 26 135 6.5 5.0 5.8 3.8 217 chr3R 16530969 intron CG42342 + chr3R 16531078 intron CG42342 + chr3R 16531186 intron CG42342 + chr3R_26_16530001 chr3R_16530001 RAL-306_125b 2763 chr3R 16535494 16535523 chr3R 16535608 16535649 9 121 7.5 8.5 8.0 1.0 155 chr3R 16535494 intron CG42342 + chr3R 16535572 intron CG42342 + chr3R 16535649 intron CG42342 + chr3R_9_16535001 chr3R_16535001 RAL-306_125b 2764 chr3R 16538345 16538419 chr3R 16538568 16538642 18 221 8.5 6.0 7.2 2.2 297 chr3R 16538345 intron CG42342 + chr3R 16538494 intron CG42342 + chr3R 16538642 intron CG42342 + chr3R_18_16535001 chr3R_16535001 RAL-306_125b 2765 chr3R 16582865 16582919 chr3R 16582993 16583007 9 124 6.5 10.0 8.2 1.0 142 chr3R 16582865 intron Scp2 - chr3R 16582936 intron Scp2 - chr3R 16583007 intron Scp2 - chr3R_9_16580001 chr3R_16580001 RAL-306_125b 2766 chr3R 16585874 16585931 chr3R 16586001 16586023 20 124 6.5 2.5 4.5 3.6 149 chr3R 16585874 intergenic not near genes chr3R 16585948 intergenic not near genes chr3R 16586023 intergenic not near genes chr3R_20_16585001 chr3R_16585001 RAL-306_125b 2767 chr3R 16601365 16601434 chr3R 16601506 16601576 33 141 9.0 9.5 9.2 3.2 211 chr3R 16601365 intron CG10345 - chr3R 16601470 intron CG10345 - chr3R 16601576 intron CG10345 - chr3R_33_16600001 chr3R_16600001 RAL-306_125b 2768 chr3R 16675264 16675342 chr3R 16675428 16675486 28 162 5.5 9.5 7.5 3.3 222 chr3R 16675264 intron Ubx - chr3R 16675375 intron Ubx - chr3R 16675486 intron Ubx - chr3R_28_16675001 chr3R_16675001 RAL-306_125b 2769 chr3R 16734825 16734868 chr3R 16734960 16735001 5 133 0.0 6.0 3.0 1.2 176 chr3R 16734825 intergenic Ubx - chr3R 16734913 intergenic Ubx - chr3R 16735001 intergenic not near genes chr3R_5_16730001 chr3R_16730001 RAL-306_125b 2770 chr3R 16743935 16743971 chr3R 16744081 16744117 6 145 13.0 8.0 10.5 0.5 182 chr3R 16743935 intron bxd - chr3R 16744026 intron bxd - chr3R 16744117 intron bxd - chr3R_6_16740001 chr3R_16740001 RAL-306_125b 2771 chr3R 16756278 16756343 chr3R 16762519 16762584 diver 9 6240 3.5 5.0 4.2 1.7 6306 chr3R 16756278 intron bxd - chr3R 16759431 intron bxd - chr3R 16762584 intron bxd - chr3R_9_16755001 chr3R_16755001 RAL-306_125b 2772 chr3R 16836924 16836987 chr3R 16837303 16837366 22 379 6.0 8.5 7.2 2.7 442 chr3R 16836924 intron iab-8 - chr3R 16837145 intron iab-8 - chr3R 16837366 intron iab-8 - chr3R_22_16835001 chr3R_16835001 RAL-306_125b 2773 chr3R 16893118 16893136 chr3R 16893244 16893262 6 126 7.5 11.0 9.2 0.6 144 chr3R 16893118 intron,5` UTR iab-8 -,CR43617 + chr3R 16893190 intron,intron iab-8 -,CR43617 + chr3R 16893262 intron,intron iab-8 -,CR43617 + chr3R_6_16890001 chr3R_16890001 RAL-306_125b 2774 chr3R 16895266 16895341 chr3R 16895410 16895485 41 143 8.0 7.5 7.8 4.7 219 chr3R 16895266 intron,intron iab-8 -,CR43617 + chr3R 16895376 intron,intron iab-8 -,CR43617 + chr3R 16895485 intron,intron iab-8 -,CR43617 + chr3R_41_16895001 chr3R_16895001 RAL-306_125b 2775 chr3R 17012910 17012979 chr3R 17013036 17013105 28 124 12.5 11.0 11.8 2.2 195 chr3R 17012910 intergenic CG8907 + chr3R 17013008 intergenic CG8907 + chr3R 17013105 intergenic not near genes chr3R_28_17010001 chr3R_17010001 RAL-306_125b 2776 chr3R 17023947 17023966 chr3R 17024150 17024168 6 202 8.0 1.0 4.5 1.1 221 chr3R 17023947 intron Pxd + chr3R 17024058 intron Pxd + chr3R 17024168 intron Pxd + chr3R_6_17020001 chr3R_17020001 RAL-306_125b 2777 chr3R 17023968 17023989 chr3R 17024149 17024171 4 191 5.5 1.0 3.2 1.0 203 chr3R 17023968 intron Pxd + chr3R 17024070 intron Pxd + chr3R 17024171 intron Pxd + chr3R_4_17020001 chr3R_17020001 RAL-306_125b 2778 chr3R 17027623 17027649 chr3R 17030923 17030969 17 3306 47.0 48.0 47.5 0.4 3346 chr3R 17027623 intron Pxd + chr3R 17029296 exon CG5225 + chr3R 17030969 intergenic CG5225 + chr3R_17_17025001 chr3R_17025001 RAL-306_125b 2779 chr3R 17121491 17121527 chr3R 17121736 17121752 13 243 9.0 7.5 8.2 1.4 261 chr3R 17121491 intron cher - chr3R 17121622 intron,exon cher -,CG42779 + chr3R 17121752 intron,exon cher -,CG42779 + chr3R_13_17120001 chr3R_17120001 RAL-306_125b 2780 chr3R 17121528 17121553 chr3R 17121722 17121798 13 238 5.0 6.0 5.5 2.0 270 chr3R 17121528 intron cher - chr3R 17121663 intron,exon cher -,CG42779 + chr3R 17121798 intron,3` UTR cher -,CG42779 + chr3R_13_17120001 chr3R_17120001 RAL-306_125b 2781 chr3R 17163432 17163454 chr3R 17163563 17163585 11 130 14.0 9.0 11.5 0.9 153 chr3R 17163432 intron Mur89F - chr3R 17163508 intron Mur89F - chr3R 17163585 intron Mur89F - chr3R_11_17160001 chr3R_17160001 RAL-306_125b 2782 chr3R 17163455 17163502 chr3R 17163561 17163591 14 126 9.0 9.0 9.0 1.4 136 chr3R 17163455 intron Mur89F - chr3R 17163523 intron Mur89F - chr3R 17163591 intron Mur89F - chr3R_14_17160001 chr3R_17160001 RAL-306_125b 2783 chr3R 17245451 17245481 chr3R 17245623 17245663 7 180 2.0 6.5 4.2 1.3 212 chr3R 17245451 intron beat-IIb - chr3R 17245557 intron beat-IIb - chr3R 17245663 intron beat-IIb - chr3R_7_17245001 chr3R_17245001 RAL-306_125b 2784 chr3R 17272813 17272867 chr3R 17272974 17273028 20 161 6.5 7.5 7.0 2.5 215 chr3R 17272813 intergenic not near genes chr3R 17272920 intergenic not near genes chr3R 17273028 intergenic not near genes chr3R_20_17270001 chr3R_17270001 RAL-306_125b 2785 chr3R 17294625 17294703 chr3R 17295103 17295186 BS 9 470 1.5 0.0 0.8 5.0 561 chr3R 17294625 intergenic not near genes chr3R 17294906 intergenic not near genes chr3R 17295186 intergenic not near genes chr3R_9_17290001 chr3R_17290001 RAL-306_125b 2786 chr3R 17346657 17346707 chr3R 17348270 17348320 F-element 26 1613 5.5 8.5 7.0 3.2 1663 chr3R 17346657 intron beat-IIa - chr3R 17347488 intron beat-IIa - chr3R 17348320 intron beat-IIa - chr3R_26_17345001 chr3R_17345001 RAL-306_125b 2787 chr3R 17355446 17355523 chr3R 17355574 17355601 25 121 4.0 6.0 5.0 4.2 155 chr3R 17355446 intron beat-IIa - chr3R 17355524 intron beat-IIa - chr3R 17355601 intron beat-IIa - chr3R_25_17355001 chr3R_17355001 RAL-306_125b 2788 chr3R 17370494 17370559 chr3R 17370621 17370665 28 123 7.5 0.5 4.0 5.6 171 chr3R 17370494 intergenic not near genes chr3R 17370580 intergenic not near genes chr3R 17370665 intergenic not near genes chr3R_28_17370001 chr3R_17370001 RAL-306_125b 2789 chr3R 17371387 17371430 chr3R 17371497 17371518 7 107 2.5 6.5 4.5 1.3 131 chr3R 17371387 3` UTR CR44256 - chr3R 17371452 3` UTR CR44256 - chr3R 17371518 3` UTR CR44256 - chr3R_7_17370001 chr3R_17370001 RAL-306_125b 2790 chr3R 17461155 17461226 chr3R 17461287 17461358 19 130 4.5 8.5 6.5 2.5 203 chr3R 17461155 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461358 intergenic not near genes chr3R_19_17460001 chr3R_17460001 RAL-306_125b 2791 chr3R 17497913 17497984 chr3R 17498049 17498120 25 134 9.5 6.5 8.0 2.8 207 chr3R 17497913 intron Dscam3 - chr3R 17498016 intron Dscam3 - chr3R 17498120 intron Dscam3 - chr3R_25_17495001 chr3R_17495001 RAL-306_125b 2792 chr3R 17506313 17506391 chr3R 17506441 17506519 9 128 3.0 4.5 3.8 1.9 206 chr3R 17506313 intergenic not near genes chr3R 17506416 intergenic not near genes chr3R 17506519 intergenic not near genes chr3R_9_17505001 chr3R_17505001 RAL-306_125b 2793 chr3R 17509225 17509240 chr3R 17516816 17516816 412 4 7587 3.0 9.5 6.2 0.6 7591 chr3R 17509225 intergenic not near genes chr3R 17513020 intergenic not near genes chr3R 17516816 intergenic not near genes chr3R_4_17510001 chr3R_17510001 RAL-306_125b 2794 chr3R 17521521 17521576 chr3R 17521718 17521776 5 205 5.0 6.0 5.5 0.8 255 chr3R 17521521 intergenic not near genes chr3R 17521648 intergenic not near genes chr3R 17521776 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-306_125b 2795 chr3R 17524864 17524867 chr3R 17524992 17524995 4 128 9.0 4.5 6.8 0.5 131 chr3R 17524864 intergenic not near genes chr3R 17524930 intergenic not near genes chr3R 17524995 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-306_125b 2796 chr3R 17566287 17566351 chr3R 17566587 17566645 19 298 6.5 9.5 8.0 2.1 358 chr3R 17566287 intron Hmx + chr3R 17566466 intron Hmx + chr3R 17566645 intron Hmx + chr3R_19_17565001 chr3R_17565001 RAL-306_125b 2797 chr3R 17591252 17591273 chr3R 17591732 17591759 F-element 8 484 14.5 7.5 11.0 0.7 507 chr3R 17591252 intergenic not near genes chr3R 17591506 intergenic not near genes chr3R 17591759 intergenic not near genes chr3R_8_17590001 chr3R_17590001 RAL-306_125b 2798 chr3R 17591276 17591301 chr3R 17591731 17591787 F-element 4 478 10.5 7.0 8.8 0.4 511 chr3R 17591276 intergenic not near genes chr3R 17591532 intergenic not near genes chr3R 17591787 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-306_125b 2799 chr3R 17615509 17615519 chr3R 17615636 17615646 7 127 10.0 6.5 8.2 0.8 137 chr3R 17615509 intergenic not near genes chr3R 17615578 intergenic not near genes chr3R 17615646 intergenic not near genes chr3R_7_17615001 chr3R_17615001 RAL-306_125b 2800 chr3R 17638314 17638327 chr3R 17638850 17638863 roo 5 536 0.0 8.5 4.2 1.0 549 chr3R 17638314 intron CG43175 + chr3R 17638588 intron CG43175 + chr3R 17638863 intron,intron CG43175 +,CR45222 + chr3R_5_17635001 chr3R_17635001 RAL-306_125b 2801 chr3R 17638332 17638340 chr3R 17638848 17638876 roo 8 533 0.0 8.0 4.0 1.6 544 chr3R 17638332 intron CG43175 + chr3R 17638604 intron CG43175 + chr3R 17638876 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-306_125b 2802 chr3R 17647194 17647272 chr3R 17647341 17647419 21 147 9.5 9.5 9.5 2.0 225 chr3R 17647194 intergenic CG14322 + chr3R 17647306 intergenic CG14322 + chr3R 17647419 intergenic CG14322 + chr3R_21_17645001 chr3R_17645001 RAL-306_125b 2803 chr3R 17723146 17723208 chr3R 17723343 17723405 25 196 14.5 7.0 10.8 2.1 259 chr3R 17723146 intergenic Pxt + chr3R 17723276 intergenic Pxt + chr3R 17723405 intergenic Pxt + chr3R_25_17720001 chr3R_17720001 RAL-306_125b 2804 chr3R 17725033 17725083 chr3R 17725177 17725213 4 137 2.5 0.0 1.2 1.8 180 chr3R 17725033 5` UTR Atg8b - chr3R 17725123 intergenic Atg8b - chr3R 17725213 intergenic Atg8b - chr3R_4_17725001 chr3R_17725001 RAL-306_125b 2805 chr3R 17773345 17773393 chr3R 17773474 17773523 11 129 6.5 6.0 6.2 1.5 178 chr3R 17773345 exon CG43102 - chr3R 17773434 intron CG43102 - chr3R 17773523 exon CG43102 - chr3R_11_17770001 chr3R_17770001 RAL-306_125b 2806 chr3R 17811150 17811176 chr3R 17811280 17811306 4 130 14.0 0.0 7.0 0.5 156 chr3R 17811150 intergenic CG18012 -,tinc + chr3R 17811228 intergenic CG18012 -,tinc + chr3R 17811306 intergenic CG18012 -,tinc + chr3R_4_17810001 chr3R_17810001 RAL-306_125b 2807 chr3R 17823158 17823233 chr3R 17823293 17823368 9 134 8.5 9.0 8.8 0.9 210 chr3R 17823158 intron tinc + chr3R 17823263 intron tinc + chr3R 17823368 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-306_125b 2808 chr3R 17825866 17825932 chr3R 17825995 17826043 9 129 0.5 5.5 3.0 2.2 177 chr3R 17825866 intron tinc + chr3R 17825954 intron tinc + chr3R 17826043 intron tinc + chr3R_9_17825001 chr3R_17825001 RAL-306_125b 2809 chr3R 17845097 17845207 chr3R 17845209 17845334 5 123 0.0 0.0 0.0 5.0 237 chr3R 17845097 intron tinc + chr3R 17845216 intron tinc + chr3R 17845334 intron tinc + chr3R_5_17845001 chr3R_17845001 RAL-306_125b 2810 chr3R 17856011 17856043 chr3R 17856143 17856179 4 142 9.5 4.0 6.8 0.5 168 chr3R 17856011 intron tinc + chr3R 17856095 intron tinc + chr3R 17856179 intron tinc + chr3R_4_17855001 chr3R_17855001 RAL-306_125b 2811 chr3R 17925810 17925846 chr3R 17927327 17927336 hobo 8 1514 7.0 2.5 4.8 1.4 1526 chr3R 17925810 intron cpo + chr3R 17926573 intron cpo + chr3R 17927336 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-306_125b 2812 chr3R 18032730 18032809 chr3R 18040455 18040534 opus 12 7725 1.0 4.5 2.8 3.2 7804 chr3R 18032730 intergenic not near genes chr3R 18036632 intergenic not near genes chr3R 18040534 intergenic not near genes chr3R_12_18035001 chr3R_18035001 RAL-306_125b 2813 chr3R 18061398 18061449 chr3R 18061540 18061585 11 140 8.0 0.0 4.0 2.2 187 chr3R 18061398 intergenic not near genes chr3R 18061492 intergenic not near genes chr3R 18061585 intergenic not near genes chr3R_11_18060001 chr3R_18060001 RAL-306_125b 2814 chr3R 18061573 18061577 chr3R 18063197 18063201 F-element 6 1624 0.0 3.0 1.5 2.4 1628 chr3R 18061573 intergenic not near genes chr3R 18062387 intergenic not near genes chr3R 18063201 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-306_125b 2815 chr3R 18117368 18117406 chr3R 18117494 18117532 11 126 14.0 10.0 12.0 0.8 164 chr3R 18117368 intron sr + chr3R 18117450 intron sr + chr3R 18117532 intron sr + chr3R_11_18115001 chr3R_18115001 RAL-306_125b 2816 chr3R 18122844 18122911 chr3R 18122972 18123038 14 128 5.5 8.5 7.0 1.8 194 chr3R 18122844 intron sr + chr3R 18122941 intron sr + chr3R 18123038 intron sr + chr3R_14_18120001 chr3R_18120001 RAL-306_125b 2817 chr3R 18126171 18126182 chr3R 18126300 18126300 4 126 13.5 7.5 10.5 0.3 129 chr3R 18126171 intron sr + chr3R 18126236 intron sr + chr3R 18126300 intron sr + chr3R_4_18125001 chr3R_18125001 RAL-306_125b 2818 chr3R 18136184 18136243 chr3R 18136348 18136385 6 159 9.5 3.5 6.5 0.8 201 chr3R 18136184 intergenic not near genes chr3R 18136284 intergenic not near genes chr3R 18136385 intergenic not near genes chr3R_6_18135001 chr3R_18135001 RAL-306_125b 2819 chr3R 18157555 18157615 chr3R 18157712 18157757 17 156 0.0 7.0 3.5 3.8 202 chr3R 18157555 intergenic CR45103 + chr3R 18157656 intergenic CR45103 + chr3R 18157757 5` UTR CR45103 + chr3R_17_18155001 chr3R_18155001 RAL-306_125b 2820 chr3R 18295052 18295106 chr3R 18295202 18295267 23 160 1.0 8.0 4.5 4.2 215 chr3R 18295052 intron l(3)05822 - chr3R 18295160 intron l(3)05822 - chr3R 18295267 intron l(3)05822 - chr3R_23_18295001 chr3R_18295001 RAL-306_125b 2821 chr3R 18302944 18302987 chr3R 18303098 18303141 10 154 4.5 0.0 2.2 3.1 197 chr3R 18302944 intergenic CG7126 -,PKD - chr3R 18303042 intergenic CG7126 -,PKD - chr3R 18303141 intergenic PKD -,CG7126 - chr3R_10_18300001 chr3R_18300001 RAL-306_125b 2822 chr3R 18379579 18379650 chr3R 18379932 18380006 19 354 8.0 7.0 7.5 2.2 427 chr3R 18379579 intron CG7675 - chr3R 18379792 intron CG7675 - chr3R 18380006 intron CG7675 - chr3R_19_18375001 chr3R_18375001 RAL-306_125b 2823 chr3R 18464262 18464332 chr3R 18464450 18464521 14 187 0.0 3.5 1.8 5.0 259 chr3R 18464262 intron fru - chr3R 18464392 intron fru - chr3R 18464521 intron fru - chr3R_14_18460001 chr3R_18460001 RAL-306_125b 2824 chr3R 18472240 18472299 chr3R 18472391 18472450 22 151 5.0 6.0 5.5 3.4 210 chr3R 18472240 intron fru - chr3R 18472345 intron fru - chr3R 18472450 intron fru - chr3R_22_18470001 chr3R_18470001 RAL-306_125b 2825 chr3R 18500706 18500723 chr3R 18500876 18500894 6 170 8.0 10.5 9.2 0.6 188 chr3R 18500706 intron fru - chr3R 18500800 intron fru - chr3R 18500894 intron fru - chr3R_6_18500001 chr3R_18500001 RAL-306_125b 2826 chr3R 18500726 18500733 chr3R 18500872 18500904 5 166 7.0 10.5 8.8 0.5 178 chr3R 18500726 intron fru - chr3R 18500815 intron fru - chr3R 18500904 intron fru - chr3R_5_18500001 chr3R_18500001 RAL-306_125b 2827 chr3R 18501558 18501617 chr3R 18501682 18501748 25 130 11.0 10.5 10.8 2.1 190 chr3R 18501558 intron fru - chr3R 18501653 intron fru - chr3R 18501748 intron fru - chr3R_25_18500001 chr3R_18500001 RAL-306_125b 2828 chr3R 18559386 18559506 chr3R 18559513 18559664 8 129 0.5 0.5 0.5 5.3 278 chr3R 18559386 intergenic CG7691 + chr3R 18559525 intergenic CG7691 + chr3R 18559664 intergenic CG7691 + chr3R_8_18555001 chr3R_18555001 RAL-306_125b 2829 chr3R 18579450 18579517 chr3R 18579577 18579668 10 140 9.0 1.0 5.0 1.7 218 chr3R 18579450 intron,intron CG7694 +,fray + chr3R 18579559 intron,intron CG7694 +,fray + chr3R 18579668 intron,intron CG7694 +,fray + chr3R_10_18575001 chr3R_18575001 RAL-306_125b 2830 chr3R 18606474 18606523 chr3R 18610746 18610795 F-element 10 4272 2.0 0.0 1.0 5.0 4321 chr3R 18606474 intron,intron qin +,CG14304 - chr3R 18608634 intron,intron qin +,CG14304 - chr3R 18610795 intron,intron qin +,CG14304 - chr3R_10_18605001 chr3R_18605001 RAL-306_125b 2831 chr3R 18615326 18615397 chr3R 18615468 18615529 14 141 0.0 6.0 3.0 3.5 203 chr3R 18615326 intron,intron qin +,CG14304 - chr3R 18615428 intron,intron qin +,CG14304 - chr3R 18615529 intron,intron qin +,CG14304 - chr3R_14_18615001 chr3R_18615001 RAL-306_125b 2832 chr3R 18617662 18617735 chr3R 18617792 18617865 19 129 8.5 10.5 9.5 1.8 203 chr3R 18617662 intron,intron qin +,CG14304 - chr3R 18617764 intron,intron qin +,CG14304 - chr3R 18617865 intron,intron qin +,CG14304 - chr3R_19_18615001 chr3R_18615001 RAL-306_125b 2833 chr3R 18618219 18618236 chr3R 18618354 18618371 7 135 20.5 6.0 13.2 0.5 152 chr3R 18618219 intron,intron qin +,CG14304 - chr3R 18618295 intron,intron qin +,CG14304 - chr3R 18618371 intron,intron qin +,CG14304 - chr3R_7_18615001 chr3R_18615001 RAL-306_125b 2834 chr3R 18618237 18618293 chr3R 18618353 18618428 27 133 7.0 5.5 6.2 3.8 191 chr3R 18618237 intron,intron qin +,CG14304 - chr3R 18618332 intron,intron qin +,CG14304 - chr3R 18618428 intron,intron qin +,CG14304 - chr3R_27_18615001 chr3R_18615001 RAL-306_125b 2835 chr3R 18670340 18670406 chr3R 18670483 18670549 33 141 5.0 9.5 7.2 4.0 209 chr3R 18670340 intron CG7702 + chr3R 18670444 intron CG7702 + chr3R 18670549 intron CG7702 + chr3R_33_18670001 chr3R_18670001 RAL-306_125b 2836 chr3R 18720273 18720335 chr3R 18720404 18720481 24 143 6.0 8.0 7.0 3.0 208 chr3R 18720273 intron Cha + chr3R 18720377 intron Cha + chr3R 18720481 intron Cha + chr3R_24_18720001 chr3R_18720001 RAL-306_125b 2837 chr3R 18766734 18766801 chr3R 18766862 18766929 27 126 7.5 8.0 7.8 3.1 195 chr3R 18766734 intron CG7720 - chr3R 18766832 intron CG7720 - chr3R 18766929 intron CG7720 - chr3R_27_18765001 chr3R_18765001 RAL-306_125b 2838 chr3R 18781643 18781717 chr3R 18781769 18781843 23 124 5.5 4.5 5.0 3.8 200 chr3R 18781643 intron CG7720 - chr3R 18781743 intron CG7720 - chr3R 18781843 intron CG7720 - chr3R_23_18780001 chr3R_18780001 RAL-306_125b 2839 chr3R 18785829 18785901 chr3R 18785950 18786028 25 126 7.0 2.0 4.5 4.5 199 chr3R 18785829 intron CG7720 - chr3R 18785928 intron CG7720 - chr3R 18786028 intron CG7720 - chr3R_25_18785001 chr3R_18785001 RAL-306_125b 2840 chr3R 18791457 18791490 chr3R 18791580 18791619 6 122 8.0 4.5 6.2 0.8 162 chr3R 18791457 intron CG7720 - chr3R 18791538 intron CG7720 - chr3R 18791619 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-306_125b 2841 chr3R 18792767 18792830 chr3R 18792900 18792963 10 132 3.0 0.0 1.5 4.0 196 chr3R 18792767 intron CG7720 - chr3R 18792865 intron CG7720 - chr3R 18792963 intron CG7720 - chr3R_10_18790001 chr3R_18790001 RAL-306_125b 2842 chr3R 18807439 18807452 chr3R 18807571 18807584 9 132 0.0 10.0 5.0 1.5 145 chr3R 18807439 intron CG18208 - chr3R 18807512 intron CG18208 - chr3R 18807584 intron CG18208 - chr3R_9_18805001 chr3R_18805001 RAL-306_125b 2843 chr3R 18812025 18812101 chr3R 18812153 18812229 23 127 7.0 7.0 7.0 2.9 204 chr3R 18812025 intron CG18208 - chr3R 18812127 intron CG18208 - chr3R 18812229 intron CG18208 - chr3R_23_18810001 chr3R_18810001 RAL-306_125b 2844 chr3R 18830021 18830083 chr3R 18830208 18830271 22 188 8.5 8.5 8.5 2.3 250 chr3R 18830021 intron CG18208 - chr3R 18830146 intron CG18208 - chr3R 18830271 intron CG18208 - chr3R_22_18830001 chr3R_18830001 RAL-306_125b 2845 chr3R 18877961 18877969 chr3R 18878138 18878146 5 177 1.0 4.0 2.5 1.4 185 chr3R 18877961 intergenic not near genes chr3R 18878054 intergenic not near genes chr3R 18878146 intergenic not near genes chr3R_5_18875001 chr3R_18875001 RAL-306_125b 2846 chr3R 18877976 18878031 chr3R 18878137 18878207 15 176 0.5 4.0 2.2 4.7 231 chr3R 18877976 intergenic not near genes chr3R 18878092 intergenic not near genes chr3R 18878207 intergenic not near genes chr3R_15_18875001 chr3R_18875001 RAL-306_125b 2847 chr3R 18887558 18887597 chr3R 18887683 18887683 9 124 7.0 12.0 9.5 0.9 125 chr3R 18887558 intergenic not near genes chr3R 18887620 intergenic not near genes chr3R 18887683 intergenic not near genes chr3R_9_18885001 chr3R_18885001 RAL-306_125b 2848 chr3R 18932551 18932591 chr3R 18932956 18932996 13 401 5.0 15.5 10.2 1.2 445 chr3R 18932551 intron CG42613 + chr3R 18932774 intron CG42613 + chr3R 18932996 intron CG42613 + chr3R_13_18930001 chr3R_18930001 RAL-306_125b 2849 chr3R 18933768 18933804 chr3R 18933888 18933914 6 119 13.0 7.5 10.2 0.5 146 chr3R 18933768 intron CG42613 + chr3R 18933841 intron CG42613 + chr3R 18933914 intron CG42613 + chr3R_6_18930001 chr3R_18930001 RAL-306_125b 2850 chr3R 19109192 19109250 chr3R 19109335 19109356 13 145 6.0 2.0 4.0 2.6 164 chr3R 19109192 intron CG6040 + chr3R 19109274 intron CG6040 + chr3R 19109356 intron CG6040 + chr3R_13_19105001 chr3R_19105001 RAL-306_125b 2851 chr3R 19128829 19128838 chr3R 19129013 19129022 4 184 0.0 3.0 1.5 1.6 193 chr3R 19128829 intron CG6040 + chr3R 19128926 intron CG6040 + chr3R 19129022 intron CG6040 + chr3R_4_19125001 chr3R_19125001 RAL-306_125b 2852 chr3R 19271385 19271445 chr3R 19271509 19271516 14 124 3.0 8.5 5.8 2.1 131 chr3R 19271385 intergenic not near genes chr3R 19271450 intergenic not near genes chr3R 19271516 intergenic not near genes chr3R_14_19270001 chr3R_19270001 RAL-306_125b 2853 chr3R 19276880 19276939 chr3R 19277010 19277069 15 127 5.0 0.0 2.5 4.3 189 chr3R 19276880 intergenic not near genes chr3R 19276974 intergenic not near genes chr3R 19277069 intergenic not near genes chr3R_15_19275001 chr3R_19275001 RAL-306_125b 2854 chr3R 19290870 19290880 chr3R 19291003 19291013 6 133 6.0 10.0 8.0 0.7 143 chr3R 19290870 intergenic not near genes chr3R 19290942 intergenic not near genes chr3R 19291013 intergenic not near genes chr3R_6_19290001 chr3R_19290001 RAL-306_125b 2855 chr3R 19340351 19340418 chr3R 19340478 19340545 18 124 12.0 6.5 9.2 1.8 194 chr3R 19340351 intergenic not near genes chr3R 19340448 intergenic not near genes chr3R 19340545 intergenic not near genes chr3R_18_19340001 chr3R_19340001 RAL-306_125b 2856 chr3R 19369470 19369515 chr3R 19369607 19369652 20 136 5.5 6.0 5.8 2.9 182 chr3R 19369470 intron Ino80 - chr3R 19369561 intron Ino80 - chr3R 19369652 intron Ino80 - chr3R_20_19365001 chr3R_19365001 RAL-306_125b 2857 chr3R 19418371 19418424 chr3R 19418513 19418566 16 142 11.5 0.0 5.8 2.4 195 chr3R 19418371 intron CG31221 + chr3R 19418468 intron CG31221 + chr3R 19418566 intron CG31221 + chr3R_16_19415001 chr3R_19415001 RAL-306_125b 2858 chr3R 19429688 19429757 chr3R 19429827 19429881 27 137 8.5 5.5 7.0 3.4 193 chr3R 19429688 intron CG31221 + chr3R 19429784 intron CG31221 + chr3R 19429881 intron CG31221 + chr3R_27_19425001 chr3R_19425001 RAL-306_125b 2859 chr3R 19431453 19431498 chr3R 19431589 19431632 7 135 5.5 10.0 7.8 0.8 179 chr3R 19431453 intron CG31221 + chr3R 19431542 intron CG31221 + chr3R 19431632 intron CG31221 + chr3R_7_19430001 chr3R_19430001 RAL-306_125b 2860 chr3R 19494366 19494414 chr3R 19494496 19494539 15 129 11.0 9.0 10.0 1.4 173 chr3R 19494366 intron Dys + chr3R 19494452 intron Dys + chr3R 19494539 intron Dys + chr3R_15_19490001 chr3R_19490001 RAL-306_125b 2861 chr3R 19505894 19505966 chr3R 19506043 19506115 29 146 5.0 7.5 6.2 4.0 221 chr3R 19505894 exon Dys + chr3R 19506004 intron Dys + chr3R 19506115 intron Dys + chr3R_29_19505001 chr3R_19505001 RAL-306_125b 2862 chr3R 19590617 19590647 chr3R 19590744 19590789 6 133 5.0 4.0 4.5 1.1 172 chr3R 19590617 exon Dys + chr3R 19590703 intron Dys + chr3R 19590789 exon Dys + chr3R_6_19590001 chr3R_19590001 RAL-306_125b 2863 chr3R 19593467 19593515 chr3R 19593591 19593643 25 132 7.0 5.0 6.0 3.6 176 chr3R 19593467 intron Dys + chr3R 19593555 intron Dys + chr3R 19593643 intron Dys + chr3R_25_19590001 chr3R_19590001 RAL-306_125b 2864 chr3R 19600216 19600263 chr3R 19600341 19600392 5 128 4.0 1.5 2.8 1.3 176 chr3R 19600216 intergenic CG7333 + chr3R 19600304 intergenic CG7333 + chr3R 19600392 intergenic CG7333 + chr3R_5_19600001 chr3R_19600001 RAL-306_125b 2865 chr3R 19622943 19622974 chr3R 19623095 19623141 8 154 2.0 8.5 5.2 1.3 198 chr3R 19622943 intron CG6231 - chr3R 19623042 intron CG6231 - chr3R 19623141 intron CG6231 - chr3R_8_19620001 chr3R_19620001 RAL-306_125b 2866 chr3R 19683479 19683538 chr3R 19683674 19683709 5 188 3.5 4.0 3.8 1.0 230 chr3R 19683479 intron Naam + chr3R 19683594 intron Naam + chr3R 19683709 intron Naam + chr3R_5_19680001 chr3R_19680001 RAL-306_125b 2867 chr3R 19716175 19716249 chr3R 19716306 19716376 6 124 3.0 7.0 5.0 1.0 201 chr3R 19716175 intergenic CG34286 - chr3R 19716276 intergenic CG34286 - chr3R 19716376 intergenic CG34286 - chr3R_6_19715001 chr3R_19715001 RAL-306_125b 2868 chr3R 19744197 19744207 chr3R 19749493 19749503 Rt1a 5 5296 14.0 11.0 12.5 0.4 5306 chr3R 19744197 intron,intron GluClalpha +,CR43488 - chr3R 19746850 intron GluClalpha + chr3R 19749503 intron GluClalpha + chr3R_5_19745001 chr3R_19745001 RAL-306_125b 2869 chr3R 19755375 19755452 chr3R 19755520 19755597 24 143 6.5 7.5 7.0 3.0 222 chr3R 19755375 intron GluClalpha + chr3R 19755486 intron GluClalpha + chr3R 19755597 intron GluClalpha + chr3R_24_19755001 chr3R_19755001 RAL-306_125b 2870 chr3R 19783138 19783212 chr3R 19783276 19783350 21 137 6.0 4.5 5.2 3.4 212 chr3R 19783138 3` UTR CG11407 + chr3R 19783244 intergenic CG11407 +,CG11453 + chr3R 19783350 intergenic CG11453 +,CG11407 + chr3R_21_19780001 chr3R_19780001 RAL-306_125b 2871 chr3R 19793853 19793927 chr3R 19793996 19794055 33 140 5.0 9.0 7.0 4.1 202 chr3R 19793853 intergenic bnl - chr3R 19793954 intergenic bnl - chr3R 19794055 intergenic bnl - chr3R_33_19790001 chr3R_19790001 RAL-306_125b 2872 chr3R 19830834 19830883 chr3R 19830961 19831010 5 125 0.0 8.0 4.0 1.0 176 chr3R 19830834 intron bnl - chr3R 19830922 intron bnl - chr3R 19831010 intron bnl - chr3R_5_19830001 chr3R_19830001 RAL-306_125b 2873 chr3R 19839489 19839544 chr3R 19839771 19839826 19 282 10.0 7.5 8.8 1.9 337 chr3R 19839489 intergenic not near genes chr3R 19839658 intergenic not near genes chr3R 19839826 intergenic not near genes chr3R_19_19835001 chr3R_19835001 RAL-306_125b 2874 chr3R 19839545 19839557 chr3R 19839761 19839839 4 265 7.5 6.5 7.0 0.5 294 chr3R 19839545 intergenic not near genes chr3R 19839692 intergenic not near genes chr3R 19839839 intergenic not near genes chr3R_4_19835001 chr3R_19835001 RAL-306_125b 2875 chr3R 19846916 19846966 chr3R 19847126 19847177 14 209 6.5 4.0 5.2 2.3 261 chr3R 19846916 intergenic CG4662 + chr3R 19847046 intergenic CG4662 + chr3R 19847177 intergenic CG4662 + chr3R_14_19845001 chr3R_19845001 RAL-306_125b 2876 chr3R 19908221 19908286 chr3R 19908355 19908420 11 133 0.0 4.0 2.0 3.7 199 chr3R 19908221 intron RhoGAP92B + chr3R 19908320 intron RhoGAP92B + chr3R 19908420 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_11_19905001 chr3R_19905001 RAL-306_125b 2877 chr3R 19913966 19914033 chr3R 19914109 19914176 25 143 13.5 10.0 11.8 2.0 210 chr3R 19913966 3` UTR RhoGAP92B + chr3R 19914071 3` UTR RhoGAP92B + chr3R 19914176 3` UTR RhoGAP92B + chr3R_25_19910001 chr3R_19910001 RAL-306_125b 2878 chr3R 19943832 19943839 chr3R 19943962 19943969 7 130 15.5 0.0 7.8 0.8 137 chr3R 19943832 intron Hs6st - chr3R 19943900 intron Hs6st - chr3R 19943969 intron Hs6st - chr3R_7_19940001 chr3R_19940001 RAL-306_125b 2879 chr3R 19943840 19943852 chr3R 19943961 19943982 8 128 13.0 0.0 6.5 1.1 142 chr3R 19943840 intron Hs6st - chr3R 19943911 intron Hs6st - chr3R 19943982 intron Hs6st - chr3R_8_19940001 chr3R_19940001 RAL-306_125b 2880 chr3R 20041072 20041080 chr3R 20041224 20041232 5 150 22.0 13.0 17.5 0.3 160 chr3R 20041072 intron CG17193 - chr3R 20041152 intron CG17193 - chr3R 20041232 intron CG17193 - chr3R_5_20040001 chr3R_20040001 RAL-306_125b 2881 chr3R 20041083 20041143 chr3R 20041215 20041270 21 143 6.0 10.0 8.0 2.3 187 chr3R 20041083 intron CG17193 - chr3R 20041176 intron CG17193 - chr3R 20041270 intron CG17193 - chr3R_21_20040001 chr3R_20040001 RAL-306_125b 2882 chr3R 20076986 20077062 chr3R 20077122 20077192 24 132 11.0 4.0 7.5 2.8 206 chr3R 20076986 intergenic not near genes chr3R 20077089 intergenic not near genes chr3R 20077192 intergenic not near genes chr3R_24_20075001 chr3R_20075001 RAL-306_125b 2883 chr3R 20109505 20109538 chr3R 20114759 20114794 copia 5 5255 8.0 8.0 8.0 0.6 5289 chr3R 20109505 intergenic not near genes chr3R 20112150 intergenic not near genes chr3R 20114794 intergenic CG10887 + chr3R_5_20110001 chr3R_20110001 RAL-306_125b 2884 chr3R 20109539 20109558 chr3R 20114754 20114814 copia 9 5251 5.0 7.5 6.2 1.2 5275 chr3R 20109539 intergenic not near genes chr3R 20112176 intergenic not near genes chr3R 20114814 intergenic CG10887 + chr3R_9_20110001 chr3R_20110001 RAL-306_125b 2885 chr3R 20156652 20156716 chr3R 20165872 20165936 roo 22 9219 6.5 11.5 9.0 2.2 9284 chr3R 20156652 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165936 intergenic not near genes chr3R_22_20160001 chr3R_20160001 RAL-306_125b 2886 chr3R 20203920 20203943 chr3R 20204051 20204074 9 131 1.0 5.5 3.2 2.1 154 chr3R 20203920 intergenic not near genes chr3R 20203997 intergenic not near genes chr3R 20204074 intergenic not near genes chr3R_9_20200001 chr3R_20200001 RAL-306_125b 2887 chr3R 20222507 20222574 chr3R 20222773 20222840 20 261 9.0 5.5 7.2 2.4 333 chr3R 20222507 intron Nlg4 + chr3R 20222674 intron Nlg4 + chr3R 20222840 intron Nlg4 + chr3R_20_20220001 chr3R_20220001 RAL-306_125b 2888 chr3R 20231449 20231481 chr3R 20231592 20231610 7 134 47.5 43.0 45.2 0.2 161 chr3R 20231449 intron Nlg4 + chr3R 20231530 intron Nlg4 + chr3R 20231610 intron Nlg4 + chr3R_7_20230001 chr3R_20230001 RAL-306_125b 2889 chr3R 20231445 20231519 chr3R 20231614 20231648 10 133 52.5 32.5 42.5 0.2 203 chr3R 20231445 intron Nlg4 + chr3R 20231546 intron Nlg4 + chr3R 20231648 intron Nlg4 + chr3R_10_20230001 chr3R_20230001 RAL-306_125b 2890 chr3R 20245236 20245297 chr3R 20248896 20248957 F-element 22 3660 9.0 8.0 8.5 2.3 3721 chr3R 20245236 3` UTR Nlg4 + chr3R 20247096 intergenic not near genes chr3R 20248957 intergenic not near genes chr3R_22_20245001 chr3R_20245001 RAL-306_125b 2891 chr3R 20266490 20266546 chr3R 20273011 20273041 Burdock 18 6517 0.5 14.5 7.5 2.1 6551 chr3R 20266490 intron cic + chr3R 20269766 intron cic + chr3R 20273041 intron cic + chr3R_18_20265001 chr3R_20265001 RAL-306_125b 2892 chr3R 20282226 20282307 chr3R 20282352 20282363 26 123 3.0 9.5 6.2 3.6 137 chr3R 20282226 intron cic + chr3R 20282294 intron cic + chr3R 20282363 intron cic + chr3R_26_20280001 chr3R_20280001 RAL-306_125b 2893 chr3R 20308142 20308207 chr3R 20308280 20308356 13 146 9.5 1.0 5.2 2.1 214 chr3R 20308142 intergenic not near genes chr3R 20308249 intergenic not near genes chr3R 20308356 intergenic not near genes chr3R_13_20305001 chr3R_20305001 RAL-306_125b 2894 chr3R 20330956 20331022 chr3R 20331492 20331558 roo 34 536 10.0 6.0 8.0 3.8 602 chr3R 20330956 intergenic Sirt2 + chr3R 20331257 intergenic Sirt2 + chr3R 20331558 intergenic not near genes chr3R_34_20330001 chr3R_20330001 RAL-306_125b 2895 chr3R 20450067 20450143 chr3R 20450197 20450278 12 134 3.5 0.0 1.8 4.3 211 chr3R 20450067 intron Gfrl - chr3R 20450172 intron Gfrl - chr3R 20450278 intron Gfrl - chr3R_12_20450001 chr3R_20450001 RAL-306_125b 2896 chr3R 20498468 20498549 chr3R 20498611 20498692 12 143 8.0 0.0 4.0 2.4 224 chr3R 20498468 intergenic not near genes chr3R 20498580 intergenic not near genes chr3R 20498692 intergenic not near genes chr3R_12_20495001 chr3R_20495001 RAL-306_125b 2897 chr3R 20512294 20512366 chr3R 20512427 20512479 19 129 4.0 4.0 4.0 3.8 185 chr3R 20512294 intron CG4288 - chr3R 20512386 5` UTR CG4288 - chr3R 20512479 intergenic CG4288 - chr3R_19_20510001 chr3R_20510001 RAL-306_125b 2898 chr3R 20512955 20513010 chr3R 20515708 20515758 opus 15 2752 8.0 0.0 4.0 3.0 2803 chr3R 20512955 intergenic CG4288 - chr3R 20514356 intergenic not near genes chr3R 20515758 intergenic not near genes chr3R_15_20510001 chr3R_20510001 RAL-306_125b 2899 chr3R 20594436 20594511 chr3R 20594576 20594656 23 141 6.5 1.0 3.8 4.8 220 chr3R 20594436 intron bon + chr3R 20594546 intron bon + chr3R 20594656 intron bon + chr3R_23_20590001 chr3R_20590001 RAL-306_125b 2900 chr3R 20703445 20703508 chr3R 20703889 20703948 25 443 7.0 8.5 7.8 2.8 503 chr3R 20703445 intron Oamb - chr3R 20703696 intron Oamb - chr3R 20703948 intron Oamb - chr3R_25_20700001 chr3R_20700001 RAL-306_125b 2901 chr3R 20707699 20707723 chr3R 20707964 20707988 8 265 20.0 12.0 16.0 0.5 289 chr3R 20707699 intron Oamb - chr3R 20707844 intron Oamb - chr3R 20707988 intron Oamb - chr3R_8_20705001 chr3R_20705001 RAL-306_125b 2902 chr3R 20707725 20707774 chr3R 20707959 20708033 17 260 6.5 10.5 8.5 1.8 308 chr3R 20707725 intron Oamb - chr3R 20707879 intron Oamb - chr3R 20708033 intron Oamb - chr3R_17_20705001 chr3R_20705001 RAL-306_125b 2903 chr3R 20717048 20717111 chr3R 20717181 20717223 11 125 4.5 8.0 6.2 1.5 175 chr3R 20717048 intergenic not near genes chr3R 20717136 intergenic not near genes chr3R 20717223 intergenic not near genes chr3R_11_20715001 chr3R_20715001 RAL-306_125b 2904 chr3R 20771705 20771715 chr3R 20771836 20771846 4 131 0.0 13.0 6.5 0.5 141 chr3R 20771705 intron,intron Syp +,Takl1 - chr3R 20771776 intron,intron Syp +,Takl1 - chr3R 20771846 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 RAL-306_125b 2905 chr3R 20787393 20787458 chr3R 20787533 20787559 26 138 5.5 5.0 5.2 4.2 166 chr3R 20787393 intron Syp + chr3R 20787476 intron Syp + chr3R 20787559 intron Syp + chr3R_26_20785001 chr3R_20785001 RAL-306_125b 2906 chr3R 20848300 20848357 chr3R 20848440 20848497 13 140 0.5 9.0 4.8 2.2 197 chr3R 20848300 intergenic not near genes chr3R 20848398 intergenic not near genes chr3R 20848497 intergenic not near genes chr3R_13_20845001 chr3R_20845001 RAL-306_125b 2907 chr3R 20850051 20850098 chr3R 20850175 20850233 13 131 0.5 7.5 4.0 2.6 182 chr3R 20850051 intergenic RpS30 + chr3R 20850142 intergenic RpS30 + chr3R 20850233 intergenic RpS30 + chr3R_13_20850001 chr3R_20850001 RAL-306_125b 2908 chr3R 20854441 20854462 chr3R 20859281 20859302 Doc 6 4839 17.5 10.0 13.8 0.4 4861 chr3R 20854441 intron Ir93a - chr3R 20856872 intron Ir93a - chr3R 20859302 exon Ir93a - chr3R_6_20855001 chr3R_20855001 RAL-306_125b 2909 chr3R 20854465 20854509 chr3R 20859274 20859288 Doc 9 4824 8.5 7.5 8.0 1.0 4823 chr3R 20854465 intron Ir93a - chr3R 20856876 intron Ir93a - chr3R 20859288 exon Ir93a - chr3R_9_20855001 chr3R_20855001 RAL-306_125b 2910 chr3R 20870203 20870283 chr3R 20870338 20870406 31 132 4.5 7.0 5.8 4.6 203 chr3R 20870203 intergenic not near genes chr3R 20870304 intergenic not near genes chr3R 20870406 intergenic not near genes chr3R_31_20870001 chr3R_20870001 RAL-306_125b 2911 chr3R 20874474 20874550 chr3R 20874609 20874685 16 132 6.5 5.5 6.0 2.3 211 chr3R 20874474 3` UTR TotB + chr3R 20874580 intergenic TotB + chr3R 20874685 intergenic TotB + chr3R_16_20870001 chr3R_20870001 RAL-306_125b 2912 chr3R 20901301 20901324 chr3R 20901436 20901460 9 134 21.5 8.0 14.8 0.6 159 chr3R 20901301 intergenic not near genes chr3R 20901380 intergenic not near genes chr3R 20901460 intergenic CG5621 + chr3R_9_20900001 chr3R_20900001 RAL-306_125b 2913 chr3R 20901325 20901373 chr3R 20901429 20901467 24 129 7.5 6.5 7.0 3.0 142 chr3R 20901325 intergenic not near genes chr3R 20901396 intergenic not near genes chr3R 20901467 intergenic CG5621 + chr3R_24_20900001 chr3R_20900001 RAL-306_125b 2914 chr3R 20936036 20936106 chr3R 20936163 20936233 15 126 6.5 7.0 6.8 1.9 197 chr3R 20936036 intron CG31191 - chr3R 20936134 intron CG31191 - chr3R 20936233 intron CG31191 - chr3R_15_20935001 chr3R_20935001 RAL-306_125b 2915 chr3R 20939096 20939170 chr3R 20939441 20939480 21 334 5.5 3.0 4.2 4.0 384 chr3R 20939096 intron CG31191 - chr3R 20939288 intron CG31191 - chr3R 20939480 intron CG31191 - chr3R_21_20935001 chr3R_20935001 RAL-306_125b 2916 chr3R 20990679 20990752 chr3R 20990811 20990884 29 131 10.0 6.0 8.0 3.2 205 chr3R 20990679 intron Calx + chr3R 20990782 intron Calx + chr3R 20990884 intron Calx + chr3R_29_20990001 chr3R_20990001 RAL-306_125b 2917 chr3R 21020354 21020432 chr3R 21020480 21020543 28 125 9.5 8.5 9.0 2.8 189 chr3R 21020354 3` UTR Rlip + chr3R 21020448 3` UTR Rlip + chr3R 21020543 3` UTR Rlip + chr3R_28_21020001 chr3R_21020001 RAL-306_125b 2918 chr3R 21041049 21041123 chr3R 21041252 21041326 25 202 6.0 8.0 7.0 3.1 277 chr3R 21041049 exon Dhc93AB - chr3R 21041188 intron Dhc93AB - chr3R 21041326 intron Dhc93AB - chr3R_25_21040001 chr3R_21040001 RAL-306_125b 2919 chr3R 21108016 21108022 chr3R 21108327 21108333 6 311 13.5 11.5 12.5 0.4 317 chr3R 21108016 intergenic Sec15 -,rtet + chr3R 21108174 intergenic Sec15 -,rtet + chr3R 21108333 intergenic rtet +,Sec15 - chr3R_6_21105001 chr3R_21105001 RAL-306_125b 2920 chr3R 21108030 21108064 chr3R 21108326 21108375 7 307 6.0 11.5 8.8 0.7 345 chr3R 21108030 intergenic Sec15 -,rtet + chr3R 21108202 intergenic Sec15 -,rtet + chr3R 21108375 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-306_125b 2921 chr3R 21132614 21132637 chr3R 21132747 21132765 9 132 13.0 1.5 7.2 1.1 151 chr3R 21132614 3` UTR Ice2 + chr3R 21132690 3` UTR Ice2 + chr3R 21132765 exon CG7009 - chr3R_9_21130001 chr3R_21130001 RAL-306_125b 2922 chr3R 21141628 21141654 chr3R 21150159 21150177 Tirant 15 8529 16.5 6.5 11.5 1.2 8549 chr3R 21141628 intron SNF4Agamma + chr3R 21145902 intron SNF4Agamma + chr3R 21150177 intron SNF4Agamma + chr3R_15_21145001 chr3R_21145001 RAL-306_125b 2923 chr3R 21141670 21141707 chr3R 21150156 21150237 Tirant 16 8515 7.0 5.5 6.2 2.2 8567 chr3R 21141670 intron SNF4Agamma + chr3R 21145954 intron SNF4Agamma + chr3R 21150237 intron SNF4Agamma + chr3R_16_21145001 chr3R_21145001 RAL-306_125b 2924 chr3R 21154520 21154587 chr3R 21154785 21154834 20 264 4.0 4.0 4.0 4.0 314 chr3R 21154520 intron SNF4Agamma + chr3R 21154677 intron SNF4Agamma + chr3R 21154834 intron SNF4Agamma + chr3R_20_21150001 chr3R_21150001 RAL-306_125b 2925 chr3R 21155708 21155753 chr3R 21155854 21155901 9 146 6.5 6.0 6.2 1.2 193 chr3R 21155708 intron SNF4Agamma + chr3R 21155804 intron SNF4Agamma + chr3R 21155901 intron SNF4Agamma + chr3R_9_21155001 chr3R_21155001 RAL-306_125b 2926 chr3R 21177258 21177293 chr3R 21177395 21177430 12 136 5.5 0.5 3.0 3.0 172 chr3R 21177258 intron SNF4Agamma + chr3R 21177344 intron SNF4Agamma + chr3R 21177430 intron SNF4Agamma + chr3R_12_21175001 chr3R_21175001 RAL-306_125b 2927 chr3R 21183207 21183260 chr3R 21183335 21183388 25 124 1.0 9.5 5.2 4.0 181 chr3R 21183207 intron SNF4Agamma + chr3R 21183298 intron SNF4Agamma + chr3R 21183388 intron SNF4Agamma + chr3R_25_21180001 chr3R_21180001 RAL-306_125b 2928 chr3R 21189644 21189724 chr3R 21189771 21189852 14 124 7.0 6.5 6.8 1.8 208 chr3R 21189644 intron SNF4Agamma + chr3R 21189748 intron SNF4Agamma + chr3R 21189852 intron SNF4Agamma + chr3R_14_21185001 chr3R_21185001 RAL-306_125b 2929 chr3R 21214628 21214658 chr3R 21214913 21214943 11 285 6.5 6.0 6.2 1.5 315 chr3R 21214628 intergenic CG5862 + chr3R 21214786 intergenic CG5862 + chr3R 21214943 intergenic CG5862 + chr3R_11_21210001 chr3R_21210001 RAL-306_125b 2930 chr3R 21240399 21240472 chr3R 21240541 21240613 25 138 6.0 4.5 5.2 4.0 214 chr3R 21240399 intergenic not near genes chr3R 21240506 intergenic not near genes chr3R 21240613 intergenic not near genes chr3R_25_21240001 chr3R_21240001 RAL-306_125b 2931 chr3R 21245804 21245806 chr3R 21245938 21245940 4 134 13.0 11.5 12.2 0.3 136 chr3R 21245804 intergenic CG5892 + chr3R 21245872 intergenic CG5892 + chr3R 21245940 intergenic not near genes chr3R_4_21245001 chr3R_21245001 RAL-306_125b 2932 chr3R 21245808 21245866 chr3R 21245936 21245997 25 133 13.5 11.5 12.5 1.9 189 chr3R 21245808 intergenic CG5892 + chr3R 21245902 intergenic CG5892 + chr3R 21245997 intergenic not near genes chr3R_25_21245001 chr3R_21245001 RAL-306_125b 2933 chr3R 21248487 21248561 chr3R 21248631 21248678 9 139 2.5 4.0 3.2 2.1 191 chr3R 21248487 intron ETHR + chr3R 21248582 intron ETHR + chr3R 21248678 intron ETHR + chr3R_9_21245001 chr3R_21245001 RAL-306_125b 2934 chr3R 21274335 21274619 chr3R 21274474 21274751 25 141 12.5 5.0 8.8 2.6 416 chr3R 21274335 3` UTR CG3301 - chr3R 21274543 3` UTR CG3301 - chr3R 21274751 intron CG3301 - chr3R_25_21270001 chr3R_21270001 RAL-306_125b 2935 chr3R 21311006 21311010 chr3R 21314568 21314572 6 3562 43.5 19.0 31.2 0.2 3566 chr3R 21311006 5` UTR Hsromega + chr3R 21312789 5` UTR Hsromega + chr3R 21314572 5` UTR Hsromega + chr3R_6_21310001 chr3R_21310001 RAL-306_125b 2936 chr3R 21315245 21315267 chr3R 21315388 21315410 11 143 20.0 0.0 10.0 1.0 165 chr3R 21315245 5` UTR Hsromega + chr3R 21315328 5` UTR Hsromega + chr3R 21315410 5` UTR Hsromega + chr3R_11_21315001 chr3R_21315001 RAL-306_125b 2937 chr3R 21385880 21385955 chr3R 21386007 21386082 20 125 3.0 5.5 4.2 3.8 202 chr3R 21385880 intergenic not near genes chr3R 21385981 intergenic not near genes chr3R 21386082 intergenic not near genes chr3R_20_21385001 chr3R_21385001 RAL-306_125b 2938 chr3R 21460993 21461008 chr3R 21461134 21461148 5 138 6.0 0.0 3.0 1.2 155 chr3R 21460993 intergenic not near genes chr3R 21461070 intergenic not near genes chr3R 21461148 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-306_125b 2939 chr3R 21462817 21462875 chr3R 21463082 21463140 21 261 7.0 0.0 3.5 4.7 323 chr3R 21462817 intergenic not near genes chr3R 21462978 intergenic not near genes chr3R 21463140 intergenic not near genes chr3R_21_21460001 chr3R_21460001 RAL-306_125b 2940 chr3R 21464353 21464428 chr3R 21464489 21464562 12 134 7.5 5.0 6.2 1.7 209 chr3R 21464353 intergenic not near genes chr3R 21464458 intergenic not near genes chr3R 21464562 intergenic not near genes chr3R_12_21460001 chr3R_21460001 RAL-306_125b 2941 chr3R 21471972 21472029 chr3R 21472103 21472160 15 130 6.0 10.5 8.2 1.6 188 chr3R 21471972 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472160 intergenic not near genes chr3R_15_21470001 chr3R_21470001 RAL-306_125b 2942 chr3R 21475949 21475973 chr3R 21476087 21476111 9 136 12.5 6.5 9.5 0.9 162 chr3R 21475949 intergenic not near genes chr3R 21476030 intergenic not near genes chr3R 21476111 intergenic not near genes chr3R_9_21475001 chr3R_21475001 RAL-306_125b 2943 chr3R 21475975 21476018 chr3R 21476079 21476156 18 135 5.0 5.0 5.0 3.0 181 chr3R 21475975 intergenic not near genes chr3R 21476066 intergenic not near genes chr3R 21476156 intergenic not near genes chr3R_18_21475001 chr3R_21475001 RAL-306_125b 2944 chr3R 21479006 21479050 chr3R 21479350 21479401 14 350 6.0 7.5 6.8 1.8 395 chr3R 21479006 intergenic not near genes chr3R 21479204 intergenic not near genes chr3R 21479401 intergenic not near genes chr3R_14_21475001 chr3R_21475001 RAL-306_125b 2945 chr3R 21491151 21491183 chr3R 21491324 21491356 7 173 17.0 13.5 15.2 0.4 205 chr3R 21491151 intergenic not near genes chr3R 21491254 intergenic not near genes chr3R 21491356 intergenic not near genes chr3R_7_21490001 chr3R_21490001 RAL-306_125b 2946 chr3R 21540188 21540259 chr3R 21540443 21540514 26 252 5.5 8.0 6.8 3.3 326 chr3R 21540188 intergenic not near genes chr3R 21540351 intergenic not near genes chr3R 21540514 intergenic not near genes chr3R_26_21540001 chr3R_21540001 RAL-306_125b 2947 chr3R 21545567 21545593 chr3R 21545694 21545720 5 124 8.5 5.5 7.0 0.6 153 chr3R 21545567 intergenic not near genes chr3R 21545644 intergenic not near genes chr3R 21545720 intergenic not near genes chr3R_5_21545001 chr3R_21545001 RAL-306_125b 2948 chr3R 21545595 21545633 chr3R 21545689 21545714 8 109 5.0 5.5 5.2 1.3 119 chr3R 21545595 intergenic not near genes chr3R 21545654 intergenic not near genes chr3R 21545714 intergenic not near genes chr3R_8_21545001 chr3R_21545001 RAL-306_125b 2949 chr3R 21554790 21554852 chr3R 21554934 21554996 10 142 5.0 6.0 5.5 1.5 206 chr3R 21554790 exon slou - chr3R 21554893 intron slou - chr3R 21554996 intron slou - chr3R_10_21550001 chr3R_21550001 RAL-306_125b 2950 chr3R 21569795 21569871 chr3R 21569926 21570000 18 128 8.0 5.0 6.5 2.4 205 chr3R 21569795 intergenic InR - chr3R 21569898 intergenic InR - chr3R 21570000 intergenic InR - chr3R_18_21565001 chr3R_21565001 RAL-306_125b 2951 chr3R 21582951 21583016 chr3R 21583102 21583167 12 151 4.5 6.5 5.5 1.8 216 chr3R 21582951 intron InR - chr3R 21583059 intron InR - chr3R 21583167 intron InR - chr3R_12_21580001 chr3R_21580001 RAL-306_125b 2952 chr3R 21725640 21725682 chr3R 21725826 21725868 13 186 0.0 11.0 5.5 2.0 228 chr3R 21725640 intergenic not near genes chr3R 21725754 intergenic not near genes chr3R 21725868 intergenic not near genes chr3R_13_21725001 chr3R_21725001 RAL-306_125b 2953 chr3R 21733938 21733954 chr3R 21734091 21734107 7 153 5.5 8.5 7.0 0.9 169 chr3R 21733938 intergenic not near genes chr3R 21734022 intergenic not near genes chr3R 21734107 intergenic not near genes chr3R_7_21730001 chr3R_21730001 RAL-306_125b 2954 chr3R 21761077 21761084 chr3R 21768519 21768526 mdg1 6 7441 19.5 8.5 14.0 0.4 7449 chr3R 21761077 exon CG42335 + chr3R 21764802 intron CG42335 + chr3R 21768526 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-306_125b 2955 chr3R 21761089 21761116 chr3R 21768516 21768553 mdg1 15 7439 15.0 7.5 11.2 1.2 7464 chr3R 21761089 exon CG42335 + chr3R 21764821 intron CG42335 + chr3R 21768553 exon CG42335 + chr3R_15_21760001 chr3R_21760001 RAL-306_125b 2956 chr3R 21761119 21761146 chr3R 21768514 21768588 mdg1 7 7432 7.5 7.0 7.2 0.9 7469 chr3R 21761119 exon CG42335 + chr3R 21764854 intron CG42335 + chr3R 21768588 exon CG42335 + chr3R_7_21760001 chr3R_21760001 RAL-306_125b 2957 chr3R 21817392 21817467 chr3R 21817657 21817726 15 257 6.5 0.0 3.2 3.6 334 chr3R 21817392 exon CASK - chr3R 21817559 intron CASK - chr3R 21817726 intron CASK - chr3R_15_21815001 chr3R_21815001 RAL-306_125b 2958 chr3R 21858806 21858877 chr3R 21858951 21859003 31 143 8.0 9.5 8.8 3.2 197 chr3R 21858806 intergenic not near genes chr3R 21858904 intergenic not near genes chr3R 21859003 intergenic not near genes chr3R_31_21855001 chr3R_21855001 RAL-306_125b 2959 chr3R 21883921 21883990 chr3R 21884049 21884118 17 126 5.5 4.0 4.8 2.9 197 chr3R 21883921 intron,3` UTR CR45046 -,CG31465 + chr3R 21884020 intron,3` UTR CR45046 -,fit - chr3R 21884118 exon fit - chr3R_17_21880001 chr3R_21880001 RAL-306_125b 2960 chr3R 21903493 21903621 chr3R 21903623 21903768 7 142 0.0 0.0 0.0 7.0 275 chr3R 21903493 intron CG6678 + chr3R 21903630 intron CG6678 + chr3R 21903768 intron CG6678 + chr3R_7_21900001 chr3R_21900001 RAL-306_125b 2961 chr3R 21907534 21907534 chr3R 28831801 28831802 11 6924268 29.5 17.0 23.2 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-306_125b 2962 chr3R 9620954 9620956 chr3R 21907535 21907535 5 12286579 20.5 33.0 26.8 0.2 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-306_125b 2963 chr3R 21907535 21907535 chr3R 28831801 28831803 25 6924266 29.5 17.0 23.2 1.0 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-306_125b 2964 chr3R 21907536 21907536 chr3R 28831801 28831802 25 6924266 30.0 17.0 23.5 1.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-306_125b 2965 chr3R 21924000 21924044 chr3R 21924140 21924171 13 134 4.5 0.0 2.2 4.1 171 chr3R 21924000 intergenic not near genes chr3R 21924086 intergenic not near genes chr3R 21924171 intergenic not near genes chr3R_13_21920001 chr3R_21920001 RAL-306_125b 2966 chr3R 21938018 21938079 chr3R 21938226 21938287 9 207 3.5 6.0 4.8 1.6 269 chr3R 21938018 intergenic not near genes chr3R 21938152 intergenic not near genes chr3R 21938287 intergenic not near genes chr3R_9_21935001 chr3R_21935001 RAL-306_125b 2967 chr3R 21983093 21983167 chr3R 21983224 21983275 18 127 5.5 5.0 5.2 2.9 182 chr3R 21983093 intron Eip93F + chr3R 21983184 intron Eip93F + chr3R 21983275 intron Eip93F + chr3R_18_21980001 chr3R_21980001 RAL-306_125b 2968 chr3R 22084568 22084620 chr3R 22084708 22084760 13 138 0.0 9.0 4.5 2.4 192 chr3R 22084568 intergenic not near genes chr3R 22084664 intergenic not near genes chr3R 22084760 intergenic not near genes chr3R_13_22080001 chr3R_22080001 RAL-306_125b 2969 chr3R 22137551 22137624 chr3R 22137816 22137882 15 259 1.5 7.5 4.5 2.7 331 chr3R 22137551 intron SKIP + chr3R 22137716 intron SKIP + chr3R 22137882 intron SKIP + chr3R_15_22135001 chr3R_22135001 RAL-306_125b 2970 chr3R 22142172 22142227 chr3R 22142300 22142355 21 128 3.5 7.0 5.2 3.4 183 chr3R 22142172 intron SKIP + chr3R 22142264 intron SKIP + chr3R 22142355 intron SKIP + chr3R_21_22140001 chr3R_22140001 RAL-306_125b 2971 chr3R 22159463 22159492 chr3R 22159584 22159626 7 129 7.0 9.5 8.2 0.8 163 chr3R 22159463 intron SKIP + chr3R 22159544 intron SKIP + chr3R 22159626 intron SKIP + chr3R_7_22155001 chr3R_22155001 RAL-306_125b 2972 chr3R 22159514 22159523 chr3R 22159578 22159656 4 116 5.0 7.5 6.2 0.6 142 chr3R 22159514 intron SKIP + chr3R 22159585 intron SKIP + chr3R 22159656 intron SKIP + chr3R_4_22155001 chr3R_22155001 RAL-306_125b 2973 chr3R 22192582 22192647 chr3R 22192871 22192919 16 285 4.5 5.5 5.0 2.7 337 chr3R 22192582 intron SKIP + chr3R 22192750 intron SKIP + chr3R 22192919 intron SKIP + chr3R_16_22190001 chr3R_22190001 RAL-306_125b 2974 chr3R 22234638 22234712 chr3R 22236007 22236081 pogo 19 1367 5.5 6.0 5.8 2.8 1443 chr3R 22234638 intron SKIP + chr3R 22235360 intron SKIP + chr3R 22236081 intron SKIP + chr3R_19_22235001 chr3R_22235001 RAL-306_125b 2975 chr3R 22239450 22239515 chr3R 22248560 22248625 roo 25 9106 7.0 8.0 7.5 2.9 9175 chr3R 22239450 intron SKIP + chr3R 22244038 intron SKIP + chr3R 22248625 intron SKIP + chr3R_25_22240001 chr3R_22240001 RAL-306_125b 2976 chr3R 22286096 22286164 chr3R 22286223 22286291 14 121 9.0 9.5 9.2 1.4 195 chr3R 22286096 intron SKIP + chr3R 22286194 intron SKIP + chr3R 22286291 intron SKIP + chr3R_14_22285001 chr3R_22285001 RAL-306_125b 2977 chr3R 22349978 22350004 chr3R 22350185 22350211 11 207 6.0 1.0 3.5 2.4 233 chr3R 22349978 intergenic not near genes chr3R 22350094 intergenic not near genes chr3R 22350211 intergenic not near genes chr3R_11_22350001 chr3R_22350001 RAL-306_125b 2978 chr3R 22433064 22433090 chr3R 22433201 22433240 13 147 19.5 11.5 15.5 0.8 176 chr3R 22433064 intron CG13847 - chr3R 22433152 intron CG13847 - chr3R 22433240 intron CG13847 - chr3R_13_22430001 chr3R_22430001 RAL-306_125b 2979 chr3R 22450500 22450566 chr3R 22453190 22453195 NOF 19 2684 10.5 2.5 6.5 2.5 2695 chr3R 22450500 intron CG34376 + chr3R 22451848 intron CG34376 + chr3R 22453195 intron CG34376 + chr3R_19_22450001 chr3R_22450001 RAL-306_125b 2980 chr3R 22672251 22672326 chr3R 22672394 22672469 21 143 11.0 8.0 9.5 2.0 218 chr3R 22672251 intron wake + chr3R 22672360 intron wake + chr3R 22672469 intron wake + chr3R_21_22670001 chr3R_22670001 RAL-306_125b 2981 chr3R 22673659 22673730 chr3R 22673804 22673875 23 145 4.0 5.0 4.5 4.2 216 chr3R 22673659 intron wake + chr3R 22673767 intron wake + chr3R 22673875 intron wake + chr3R_23_22670001 chr3R_22670001 RAL-306_125b 2982 chr3R 22687354 22687380 chr3R 22687480 22687507 4 126 19.5 5.5 12.5 0.3 153 chr3R 22687354 3` UTR CG17625 + chr3R 22687430 intergenic CG17625 +,wfs1 - chr3R 22687507 intergenic wfs1 -,CG17625 + chr3R_4_22685001 chr3R_22685001 RAL-306_125b 2983 chr3R 22769046 22769071 chr3R 22769173 22769198 9 127 16.0 7.5 11.8 0.7 152 chr3R 22769046 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769122 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769198 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_9_22765001 chr3R_22765001 RAL-306_125b 2984 chr3R 22769072 22769121 chr3R 22769168 22769238 22 123 8.0 7.5 7.8 2.5 166 chr3R 22769072 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769155 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769238 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_22_22765001 chr3R_22765001 RAL-306_125b 2985 chr3R 22840773 22840841 chr3R 22841285 22841353 18 508 7.0 7.0 7.0 2.2 580 chr3R 22840773 intergenic not near genes chr3R 22841063 intergenic not near genes chr3R 22841353 intergenic not near genes chr3R_18_22840001 chr3R_22840001 RAL-306_125b 2986 chr3R 22871391 22871464 chr3R 22871540 22871613 15 146 5.5 4.0 4.8 2.6 222 chr3R 22871391 intergenic not near genes chr3R 22871502 intergenic not near genes chr3R 22871613 intergenic not near genes chr3R_15_22870001 chr3R_22870001 RAL-306_125b 2987 chr3R 22877249 22877323 chr3R 22877427 22877460 14 175 12.5 6.5 9.5 1.3 211 chr3R 22877249 intergenic not near genes chr3R 22877354 intergenic not near genes chr3R 22877460 intergenic not near genes chr3R_14_22875001 chr3R_22875001 RAL-306_125b 2988 chr3R 22880561 22880611 chr3R 22880688 22880738 12 118 6.5 12.0 9.2 1.2 177 chr3R 22880561 intergenic not near genes chr3R 22880650 intergenic not near genes chr3R 22880738 intergenic not near genes chr3R_12_22880001 chr3R_22880001 RAL-306_125b 2989 chr3R 22880885 22880948 chr3R 22881073 22881136 21 186 7.5 9.5 8.5 2.2 251 chr3R 22880885 intergenic not near genes chr3R 22881010 intergenic not near genes chr3R 22881136 intergenic not near genes chr3R_21_22880001 chr3R_22880001 RAL-306_125b 2990 chr3R 22881192 22881218 chr3R 22884948 22884974 Doc 11 3756 5.0 12.0 8.5 1.2 3782 chr3R 22881192 intergenic not near genes chr3R 22883083 intergenic not near genes chr3R 22884974 intergenic not near genes chr3R_11_22880001 chr3R_22880001 RAL-306_125b 2991 chr3R 22906594 22906667 chr3R 22906722 22906797 15 126 11.0 11.5 11.2 1.2 203 chr3R 22906594 intron klg + chr3R 22906696 intron klg + chr3R 22906797 intron klg + chr3R_15_22905001 chr3R_22905001 RAL-306_125b 2992 chr3R 22913188 22913235 chr3R 22913288 22913361 9 122 4.5 5.5 5.0 1.5 173 chr3R 22913188 intron klg + chr3R 22913274 intron klg + chr3R 22913361 intron klg + chr3R_9_22910001 chr3R_22910001 RAL-306_125b 2993 chr3R 22953802 22953858 chr3R 22954487 22954553 10 695 6.5 1.0 3.8 2.1 751 chr3R 22953802 intron klg + chr3R 22954178 intron klg + chr3R 22954553 intron klg + chr3R_10_22950001 chr3R_22950001 RAL-306_125b 2994 chr3R 22974264 22974286 chr3R 22974398 22974420 8 134 1.0 7.0 4.0 1.6 156 chr3R 22974264 intergenic not near genes chr3R 22974342 intergenic not near genes chr3R 22974420 intergenic not near genes chr3R_8_22970001 chr3R_22970001 RAL-306_125b 2995 chr3R 22974291 22974304 chr3R 22974376 22974438 6 124 1.0 5.0 3.0 1.5 147 chr3R 22974291 intergenic not near genes chr3R 22974364 intergenic not near genes chr3R 22974438 intergenic not near genes chr3R_6_22970001 chr3R_22970001 RAL-306_125b 2996 chr3R 22993462 22993475 chr3R 22993647 22993660 4 184 16.0 9.0 12.5 0.3 198 chr3R 22993462 intron Nha2 - chr3R 22993561 intron Nha2 - chr3R 22993660 intron Nha2 - chr3R_4_22990001 chr3R_22990001 RAL-306_125b 2997 chr3R 22993478 22993533 chr3R 22993640 22993675 15 176 5.0 6.0 5.5 2.3 197 chr3R 22993478 intron Nha2 - chr3R 22993576 intron Nha2 - chr3R 22993675 intron Nha2 - chr3R_15_22990001 chr3R_22990001 RAL-306_125b 2998 chr3R 23011331 23011394 chr3R 23011477 23011540 20 146 12.5 10.5 11.5 1.6 209 chr3R 23011331 intergenic not near genes chr3R 23011436 intergenic CR44225 - chr3R 23011540 intergenic CR44225 - chr3R_20_23010001 chr3R_23010001 RAL-306_125b 2999 chr3R 23090354 23090434 chr3R 23090486 23090540 22 129 5.5 5.5 5.5 3.4 186 chr3R 23090354 intron CG13830 - chr3R 23090447 intron CG13830 - chr3R 23090540 intron CG13830 - chr3R_22_23090001 chr3R_23090001 RAL-306_125b 3000 chr3R 23091211 23091217 chr3R 23091346 23091352 4 134 19.5 6.5 13.0 0.3 141 chr3R 23091211 intron CG13830 - chr3R 23091282 intron CG13830 - chr3R 23091352 intron CG13830 - chr3R_4_23090001 chr3R_23090001 RAL-306_125b 3001 chr3R 23091220 23091280 chr3R 23091345 23091415 29 133 9.5 6.5 8.0 3.2 195 chr3R 23091220 intron CG13830 - chr3R 23091318 intron CG13830 - chr3R 23091415 intron CG13830 - chr3R_29_23090001 chr3R_23090001 RAL-306_125b 3002 chr3R 23114136 23114194 chr3R 23114262 23114322 27 128 11.0 14.5 12.8 2.0 186 chr3R 23114136 3` UTR Rassf - chr3R 23114229 3` UTR Rassf - chr3R 23114322 3` UTR Rassf - chr3R_27_23110001 chr3R_23110001 RAL-306_125b 3003 chr3R 23182446 23182501 chr3R 23182613 23182653 14 165 9.5 0.0 4.8 2.4 207 chr3R 23182446 intron Irk1 + chr3R 23182550 intron Irk1 + chr3R 23182653 intron Irk1 + chr3R_14_23180001 chr3R_23180001 RAL-306_125b 3004 chr3R 23182503 23182654 chr3R 23182610 23182791 17 136 0.0 0.0 0.0 17.0 288 chr3R 23182503 intron Irk1 + chr3R 23182647 intron Irk1 + chr3R 23182791 intron Irk1 + chr3R_17_23180001 chr3R_23180001 RAL-306_125b 3005 chr3R 23291207 23291275 chr3R 23291343 23291411 12 134 7.0 12.5 9.8 1.1 204 chr3R 23291207 3` UTR pnt - chr3R 23291309 3` UTR pnt - chr3R 23291411 exon pnt - chr3R_12_23290001 chr3R_23290001 RAL-306_125b 3006 chr3R 23319657 23319671 chr3R 23319786 23319800 8 128 0.0 12.0 6.0 1.1 143 chr3R 23319657 intron pnt - chr3R 23319728 intron pnt - chr3R 23319800 intron pnt - chr3R_8_23315001 chr3R_23315001 RAL-306_125b 3007 chr3R 23335395 23335403 chr3R 23335523 23335531 4 128 16.5 6.0 11.2 0.3 136 chr3R 23335395 intron pnt - chr3R 23335463 intron pnt - chr3R 23335531 intron pnt - chr3R_4_23335001 chr3R_23335001 RAL-306_125b 3008 chr3R 23335404 23335456 chr3R 23335521 23335584 18 124 11.5 5.0 8.2 2.0 180 chr3R 23335404 intron pnt - chr3R 23335494 intron pnt - chr3R 23335584 intron pnt - chr3R_18_23335001 chr3R_23335001 RAL-306_125b 3009 chr3R 23356957 23356989 chr3R 23357093 23357125 17 136 10.0 14.5 12.2 1.3 168 chr3R 23356957 intron Sec13 + chr3R 23357041 intron Sec13 + chr3R 23357125 intron Sec13 + chr3R_17_23355001 chr3R_23355001 RAL-306_125b 3010 chr3R 23360179 23360204 chr3R 23360290 23360299 7 114 0.0 11.0 5.5 1.1 120 chr3R 23360179 3` UTR RpS3 + chr3R 23360239 intergenic RpS3 + chr3R 23360299 intergenic RpS3 + chr3R_7_23360001 chr3R_23360001 RAL-306_125b 3011 chr3R 23390916 23390938 chr3R 23391048 23391055 5 129 2.5 5.0 3.8 1.0 139 chr3R 23390916 intergenic CR43387 + chr3R 23390986 intergenic CR43387 + chr3R 23391055 intergenic CR43387 + chr3R_5_23390001 chr3R_23390001 RAL-306_125b 3012 chr3R 23453654 23453699 chr3R 23453768 23453828 15 128 8.5 10.5 9.5 1.4 174 chr3R 23453654 intron CG4374 - chr3R 23453741 intron CG4374 - chr3R 23453828 intron CG4374 - chr3R_15_23450001 chr3R_23450001 RAL-306_125b 3013 chr3R 23488730 23488800 chr3R 23488959 23489029 13 226 4.5 7.0 5.8 1.9 299 chr3R 23488730 exon Ir94h + chr3R 23488880 exon Ir94h + chr3R 23489029 exon Ir94h + chr3R_13_23485001 chr3R_23485001 RAL-306_125b 3014 chr3R 23497900 23497974 chr3R 23498032 23498103 8 128 2.0 5.5 3.8 1.7 203 chr3R 23497900 intergenic not near genes chr3R 23498002 intergenic not near genes chr3R 23498103 intergenic not near genes chr3R_8_23495001 chr3R_23495001 RAL-306_125b 3015 chr3R 23535212 23535274 chr3R 23535472 23535489 12 251 9.5 6.5 8.0 1.3 277 chr3R 23535212 exon CG16732 - chr3R 23535350 exon CG16732 - chr3R 23535489 exon CG16732 - chr3R_12_23535001 chr3R_23535001 RAL-306_125b 3016 chr3R 23535276 23535284 chr3R 23535471 23535499 12 225 7.0 6.5 6.8 1.5 223 chr3R 23535276 exon CG16732 - chr3R 23535388 exon CG16732 - chr3R 23535499 exon CG16732 - chr3R_12_23535001 chr3R_23535001 RAL-306_125b 3017 chr3R 23558348 23558427 chr3R 23560179 23560258 Bari1 23 1828 9.5 7.0 8.2 2.5 1910 chr3R 23558348 intron beat-IV + chr3R 23559303 intron beat-IV + chr3R 23560258 intron beat-IV + chr3R_23_23555001 chr3R_23555001 RAL-306_125b 3018 chr3R 23564395 23564466 chr3R 23564589 23564660 22 194 12.0 6.5 9.2 2.2 265 chr3R 23564395 intron beat-IV + chr3R 23564528 intron beat-IV + chr3R 23564660 intron beat-IV + chr3R_22_23560001 chr3R_23560001 RAL-306_125b 3019 chr3R 23589980 23590044 chr3R 23590128 23590192 25 146 13.0 11.5 12.2 1.9 212 chr3R 23589980 intergenic CG33337 -,CG10182 - chr3R 23590086 intergenic CG33337 -,CG10182 - chr3R 23590192 exon CG33337 - chr3R_25_23590001 chr3R_23590001 RAL-306_125b 3020 chr3R 23626091 23626161 chr3R 23626235 23626305 13 144 5.5 5.5 5.5 2.0 214 chr3R 23626091 intron CG31145 - chr3R 23626198 intron CG31145 - chr3R 23626305 intron CG31145 - chr3R_13_23625001 chr3R_23625001 RAL-306_125b 3021 chr3R 23627734 23627768 chr3R 23627860 23627896 4 126 7.0 2.0 4.5 0.7 162 chr3R 23627734 intron CG31145 - chr3R 23627815 intron CG31145 - chr3R 23627896 intron CG31145 - chr3R_4_23625001 chr3R_23625001 RAL-306_125b 3022 chr3R 23643926 23643953 chr3R 23644055 23644083 10 129 3.5 9.0 6.2 1.4 157 chr3R 23643926 intron CG31145 - chr3R 23644004 intron CG31145 - chr3R 23644083 intron CG31145 - chr3R_10_23640001 chr3R_23640001 RAL-306_125b 3023 chr3R 23676753 23676818 chr3R 23676911 23676976 25 155 8.0 6.5 7.2 3.0 223 chr3R 23676753 intergenic not near genes chr3R 23676864 intergenic CG13822 + chr3R 23676976 intergenic CG13822 + chr3R_25_23675001 chr3R_23675001 RAL-306_125b 3024 chr3R 23684647 23684717 chr3R 23685183 23685253 roo 11 533 3.5 2.0 2.8 2.9 606 chr3R 23684647 exon CG18754 + chr3R 23684950 intron CG18754 + chr3R 23685253 exon CG18754 + chr3R_11_23680001 chr3R_23680001 RAL-306_125b 3025 chr3R 23835364 23835430 chr3R 23844564 23844628 roo 13 9198 7.5 0.0 3.8 2.7 9264 chr3R 23835364 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844628 intron CG34355 + chr3R_13_23835001 chr3R_23835001 RAL-306_125b 3026 chr3R 23851037 23851079 chr3R 23858754 23858795 opus 12 7717 12.5 14.0 13.2 0.8 7758 chr3R 23851037 3` UTR CG34355 + chr3R 23854916 intergenic not near genes chr3R 23858795 intergenic not near genes chr3R_12_23850001 chr3R_23850001 RAL-306_125b 3027 chr3R 23873933 23873970 chr3R 23874065 23874068 9 122 9.5 20.5 15.0 0.6 135 chr3R 23873933 intron Pli - chr3R 23874000 intron Pli - chr3R 23874068 intron Pli - chr3R_9_23870001 chr3R_23870001 RAL-306_125b 3028 chr3R 23874530 23874548 chr3R 23874857 23874881 6 336 12.0 3.0 7.5 0.7 351 chr3R 23874530 intron Pli - chr3R 23874706 intron Pli - chr3R 23874881 intron Pli - chr3R_6_23870001 chr3R_23870001 RAL-306_125b 3029 chr3R 23944872 23944933 chr3R 23945007 23945068 24 131 7.0 6.0 6.5 3.2 196 chr3R 23944872 intron CG12268 - chr3R 23944970 intron CG12268 - chr3R 23945068 exon CG12268 - chr3R_24_23940001 chr3R_23940001 RAL-306_125b 3030 chr3R 23969719 23969795 chr3R 23969866 23969900 14 142 4.0 8.0 6.0 2.0 181 chr3R 23969719 intron CG31140 + chr3R 23969810 intron CG31140 + chr3R 23969900 intron CG31140 + chr3R_14_23965001 chr3R_23965001 RAL-306_125b 3031 chr3R 24011621 24011651 chr3R 24011752 24011784 8 132 9.5 1.0 5.2 1.3 163 chr3R 24011621 intron KrT95D - chr3R 24011702 intron KrT95D - chr3R 24011784 intron KrT95D - chr3R_8_24010001 chr3R_24010001 RAL-306_125b 3032 chr3R 24072067 24072123 chr3R 24072524 24072609 jockey 21 478 4.5 0.0 2.2 6.6 542 chr3R 24072067 intron 4EHP - chr3R 24072338 intron 4EHP - chr3R 24072609 intron 4EHP - chr3R_21_24070001 chr3R_24070001 RAL-306_125b 3033 chr3R 24076879 24076948 chr3R 24078396 24078424 hobo 24 1510 4.5 6.5 5.5 3.7 1545 chr3R 24076879 intron 4EHP - chr3R 24077652 intron 4EHP - chr3R 24078424 intron 4EHP - chr3R_24_24075001 chr3R_24075001 RAL-306_125b 3034 chr3R 24134063 24134124 chr3R 24134220 24134223 4 138 5.0 5.0 5.0 0.7 160 chr3R 24134063 exon Tsc1 + chr3R 24134143 exon Tsc1 + chr3R 24134223 exon Tsc1 + chr3R_4_24130001 chr3R_24130001 RAL-306_125b 3035 chr3R 24207187 24207237 chr3R 24212313 24212363 flea 16 5125 6.5 13.0 9.8 1.5 5176 chr3R 24207187 intron twin - chr3R 24209775 intron twin - chr3R 24212363 intron twin - chr3R_16_24205001 chr3R_24205001 RAL-306_125b 3036 chr3R 24220623 24220698 chr3R 24220752 24220827 34 127 12.5 8.0 10.2 3.0 204 chr3R 24220623 intron twin - chr3R 24220725 intron twin - chr3R 24220827 intron twin - chr3R_34_24220001 chr3R_24220001 RAL-306_125b 3037 chr3R 24431550 24431612 chr3R 24431679 24431741 25 127 11.5 0.5 6.0 3.6 191 chr3R 24431550 intron nAChRalpha1 - chr3R 24431646 intron nAChRalpha1 - chr3R 24431741 intron nAChRalpha1 - chr3R_25_24430001 chr3R_24430001 RAL-306_125b 3038 chr3R 24433426 24433500 chr3R 24433555 24433629 15 127 0.5 5.5 3.0 3.8 203 chr3R 24433426 intron nAChRalpha1 - chr3R 24433528 intron nAChRalpha1 - chr3R 24433629 intron nAChRalpha1 - chr3R_15_24430001 chr3R_24430001 RAL-306_125b 3039 chr3R 24447674 24447756 chr3R 24447811 24447893 6 136 4.0 5.0 4.5 1.1 219 chr3R 24447674 intron nAChRalpha1 - chr3R 24447784 intron nAChRalpha1 - chr3R 24447893 intron nAChRalpha1 - chr3R_6_24445001 chr3R_24445001 RAL-306_125b 3040 chr3R 24482884 24482912 chr3R 24483017 24483040 7 134 11.5 10.0 10.8 0.6 156 chr3R 24482884 intergenic not near genes chr3R 24482962 intergenic not near genes chr3R 24483040 intergenic not near genes chr3R_7_24480001 chr3R_24480001 RAL-306_125b 3041 chr3R 24493237 24493304 chr3R 24493517 24493584 BS 36 277 7.0 8.5 7.8 4.1 347 chr3R 24493237 intergenic not near genes chr3R 24493410 intergenic not near genes chr3R 24493584 intergenic not near genes chr3R_36_24490001 chr3R_24490001 RAL-306_125b 3042 chr3R 24522270 24522330 chr3R 24522560 24522620 17 290 16.5 6.5 11.5 1.4 350 chr3R 24522270 3` UTR Pp1alpha-96A + chr3R 24522445 intergenic CG13622 -,Pp1alpha-96A + chr3R 24522620 exon CG13622 - chr3R_17_24520001 chr3R_24520001 RAL-306_125b 3043 chr3R 24523850 24523922 chr3R 24523986 24524058 5 136 22.5 19.0 20.8 0.2 208 chr3R 24523850 intergenic CG13622 - chr3R 24523954 intergenic CG13622 - chr3R 24524058 intergenic CG13622 - chr3R_5_24520001 chr3R_24520001 RAL-306_125b 3044 chr3R 24527765 24527827 chr3R 24527905 24527968 22 140 7.5 8.5 8.0 2.4 203 chr3R 24527765 intergenic CG13618 +,CG6607 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527968 intergenic CG6607 +,CG13618 + chr3R_22_24525001 chr3R_24525001 RAL-306_125b 3045 chr3R 24566321 24566387 chr3R 24566458 24566524 5 137 27.5 26.0 26.8 0.2 203 chr3R 24566321 intron CG13624 - chr3R 24566422 intron CG13624 - chr3R 24566524 intron CG13624 - chr3R_5_24565001 chr3R_24565001 RAL-306_125b 3046 chr3R 24572064 24572123 chr3R 24572208 24572267 10 142 26.5 27.0 26.8 0.4 203 chr3R 24572064 intron CG13624 - chr3R 24572166 intron CG13624 - chr3R 24572267 intron CG13624 - chr3R_10_24570001 chr3R_24570001 RAL-306_125b 3047 chr3R 24594627 24594660 chr3R 24594917 24594950 pogo 12 289 5.0 16.0 10.5 1.0 323 chr3R 24594627 intron mld + chr3R 24594788 intron mld + chr3R 24594950 intron mld + chr3R_12_24590001 chr3R_24590001 RAL-306_125b 3048 chr3R 24596646 24596699 chr3R 24596773 24596826 11 127 16.0 14.5 15.2 0.7 180 chr3R 24596646 intron mld + chr3R 24596736 intron mld + chr3R 24596826 intron mld + chr3R_11_24595001 chr3R_24595001 RAL-306_125b 3049 chr3R 24624364 24624379 chr3R 24624502 24624518 5 139 24.5 23.5 24.0 0.2 154 chr3R 24624364 intron Syx18 - chr3R 24624441 intron Syx18 - chr3R 24624518 exon Syx18 - chr3R_5_24620001 chr3R_24620001 RAL-306_125b 3050 chr3R 24667561 24667593 chr3R 24667688 24667720 5 127 31.5 25.0 28.2 0.2 159 chr3R 24667561 intron slo + chr3R 24667640 intron slo + chr3R 24667720 intron slo + chr3R_5_24665001 chr3R_24665001 RAL-306_125b 3051 chr3R 24670004 24670190 chr3R 24670164 24670324 22 133 0.0 0.5 0.2 18.3 320 chr3R 24670004 intron slo + chr3R 24670164 intron slo + chr3R 24670324 intron slo + chr3R_22_24670001 chr3R_24670001 RAL-306_125b 3052 chr3R 24671173 24671242 chr3R 24671300 24671369 9 126 7.5 8.5 8.0 1.0 196 chr3R 24671173 intron slo + chr3R 24671271 intron slo + chr3R 24671369 intron slo + chr3R_9_24670001 chr3R_24670001 RAL-306_125b 3053 chr3R 24730049 24730117 chr3R 24732477 24732547 Doc 5 2421 10.0 3.0 6.5 0.7 2498 chr3R 24730049 intron tok + chr3R 24731298 intron tok + chr3R 24732547 intron tok + chr3R_5_24730001 chr3R_24730001 RAL-306_125b 3054 chr3R 24742984 24743060 chr3R 24743119 24743178 17 133 4.5 8.5 6.5 2.3 194 chr3R 24742984 intron tok + chr3R 24743081 intron tok + chr3R 24743178 exon tok + chr3R_17_24740001 chr3R_24740001 RAL-306_125b 3055 chr3R 24787501 24787544 chr3R 24787627 24787670 7 126 21.0 21.0 21.0 0.3 169 chr3R 24787501 intergenic CG5805 - chr3R 24787586 intergenic CG5805 -,Ets96B + chr3R 24787670 intergenic CG5805 -,Ets96B + chr3R_7_24785001 chr3R_24785001 RAL-306_125b 3056 chr3R 24792010 24792038 chr3R 24792141 24792168 9 131 17.0 20.5 18.8 0.5 158 chr3R 24792010 intron Ets96B + chr3R 24792089 intron Ets96B + chr3R 24792168 intron Ets96B + chr3R_9_24790001 chr3R_24790001 RAL-306_125b 3057 chr3R 24854839 24854906 chr3R 24854971 24855038 11 132 17.0 20.0 18.5 0.6 199 chr3R 24854839 3` UTR,3` UTR nct +,HdacX - chr3R 24854938 3` UTR HdacX - chr3R 24855038 3` UTR HdacX - chr3R_11_24850001 chr3R_24850001 RAL-306_125b 3058 chr3R 24912446 24912509 chr3R 24912578 24912641 11 129 13.0 9.5 11.2 0.9 195 chr3R 24912446 intergenic not near genes chr3R 24912544 intergenic CR44267 + chr3R 24912641 intergenic CR44267 + chr3R_11_24910001 chr3R_24910001 RAL-306_125b 3059 chr3R 24927090 24927147 chr3R 24931931 24931988 Doc 18 4839 10.5 8.0 9.2 1.8 4898 chr3R 24927090 intergenic Trf4-2 + chr3R 24929539 intergenic not near genes chr3R 24931988 intergenic CG11771 + chr3R_18_24925001 chr3R_24925001 RAL-306_125b 3060 chr3R 24974865 24974934 chr3R 24974994 24975063 11 129 30.0 26.5 28.2 0.4 198 chr3R 24974865 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975063 intergenic not near genes chr3R_11_24970001 chr3R_24970001 RAL-306_125b 3061 chr3R 25004898 25004919 chr3R 25005031 25005052 5 133 15.5 21.0 18.2 0.3 154 chr3R 25004898 intron tnc + chr3R 25004975 intron tnc + chr3R 25005052 intron tnc + chr3R_5_25000001 chr3R_25000001 RAL-306_125b 3062 chr3R 25018220 25018279 chr3R 25018337 25018391 8 122 20.5 26.5 23.5 0.3 171 chr3R 25018220 exon tnc + chr3R 25018306 exon tnc + chr3R 25018391 exon tnc + chr3R_8_25015001 chr3R_25015001 RAL-306_125b 3063 chr3R 25027506 25027550 chr3R 25027769 25027813 6 262 31.0 30.0 30.5 0.2 307 chr3R 25027506 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027813 intron Hr96 + chr3R_6_25025001 chr3R_25025001 RAL-306_125b 3064 chr3R 25052173 25052238 chr3R 25052319 25052384 9 146 19.0 20.0 19.5 0.4 211 chr3R 25052173 intron CG11791 + chr3R 25052278 intron CG11791 + chr3R 25052384 intron CG11791 + chr3R_9_25050001 chr3R_25050001 RAL-306_125b 3065 chr3R 25053069 25053158 chr3R 25053218 25053287 15 144 18.0 24.5 21.2 0.7 218 chr3R 25053069 3` UTR CG11791 + chr3R 25053178 intergenic CG11791 +,CG31109 - chr3R 25053287 intergenic CG31109 -,CG11791 + chr3R_15_25050001 chr3R_25050001 RAL-306_125b 3066 chr3R 25072719 25072776 chr3R 25072861 25072918 13 142 23.0 23.0 23.0 0.5 199 chr3R 25072719 intergenic CG11836 +,CG9996 - chr3R 25072818 3` UTR CG9996 - chr3R 25072918 exon CG9996 - chr3R_13_25070001 chr3R_25070001 RAL-306_125b 3067 chr3R 25086144 25086201 chr3R 25086281 25086338 5 137 16.5 18.0 17.2 0.3 194 chr3R 25086144 intergenic not near genes chr3R 25086241 intergenic not near genes chr3R 25086338 intergenic not near genes chr3R_5_25085001 chr3R_25085001 RAL-306_125b 3068 chr3R 25093096 25093156 chr3R 25093393 25093454 16 297 15.5 18.5 17.0 0.9 358 chr3R 25093096 intergenic not near genes chr3R 25093275 intergenic not near genes chr3R 25093454 intergenic not near genes chr3R_16_25090001 chr3R_25090001 RAL-306_125b 3069 chr3R 25125996 25126031 chr3R 25126640 25126675 6 643 28.5 34.0 31.2 0.2 679 chr3R 25125996 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126336 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126675 3` UTR,exon CG42503 -,Mocs2 - chr3R_6_25125001 chr3R_25125001 RAL-306_125b 3070 chr3R 25136358 25136421 chr3R 25136488 25136551 5 130 19.0 17.5 18.2 0.3 193 chr3R 25136358 3` UTR Bili + chr3R 25136454 3` UTR Bili + chr3R 25136551 3` UTR Bili + chr3R_5_25135001 chr3R_25135001 RAL-306_125b 3071 chr3R 25164437 25164461 chr3R 25164568 25164592 4 131 20.0 20.0 20.0 0.2 155 chr3R 25164437 intergenic not near genes chr3R 25164514 intergenic not near genes chr3R 25164592 intergenic not near genes chr3R_4_25160001 chr3R_25160001 RAL-306_125b 3072 chr3R 25166153 25166391 chr3R 25166280 25166517 27 127 1.0 0.0 0.5 18.0 364 chr3R 25166153 intergenic not near genes chr3R 25166335 intergenic not near genes chr3R 25166517 intergenic not near genes chr3R_27_25165001 chr3R_25165001 RAL-306_125b 3073 chr3R 25207596 25207626 chr3R 25207739 25207769 8 143 16.0 13.0 14.5 0.5 173 chr3R 25207596 intron,intron Cad96Ca -,CG13654 + chr3R 25207682 intron,intron Cad96Ca -,CG13654 + chr3R 25207769 intron,intron Cad96Ca -,CG13654 + chr3R_8_25205001 chr3R_25205001 RAL-306_125b 3074 chr3R 25209534 25209624 chr3R 25209679 25209731 10 131 15.5 19.0 17.2 0.5 197 chr3R 25209534 intron CG13654 + chr3R 25209632 intron CG13654 + chr3R 25209731 intron CG13654 + chr3R_10_25205001 chr3R_25205001 RAL-306_125b 3075 chr3R 25235781 25235800 chr3R 25235911 25235930 7 130 8.5 8.5 8.5 0.7 149 chr3R 25235781 intergenic CG10420 - chr3R 25235856 intergenic CG10420 - chr3R 25235930 intergenic CG10420 - chr3R_7_25235001 chr3R_25235001 RAL-306_125b 3076 chr3R 25235801 25235847 chr3R 25235901 25235977 14 127 5.5 8.0 6.8 1.8 176 chr3R 25235801 intergenic CG10420 - chr3R 25235889 intergenic CG10420 - chr3R 25235977 intergenic CG10420 - chr3R_14_25235001 chr3R_25235001 RAL-306_125b 3077 chr3R 25324341 25324379 chr3R 25328956 25328994 Doc 7 4613 7.0 17.5 12.2 0.5 4653 chr3R 25324341 exon CHKov1 - chr3R 25326668 intron CHKov1 - chr3R 25328994 exon CHKov1 - chr3R_7_25325001 chr3R_25325001 RAL-306_125b 3078 chr3R 25368426 25368502 chr3R 25368594 25368674 10 168 9.5 0.0 4.8 1.7 248 chr3R 25368426 intron Fur1 - chr3R 25368550 intron Fur1 - chr3R 25368674 intron Fur1 - chr3R_10_25365001 chr3R_25365001 RAL-306_125b 3079 chr3R 25407490 25407537 chr3R 25407815 25407852 15 324 9.0 0.0 4.5 2.7 362 chr3R 25407490 intron Fur1 - chr3R 25407671 intron Fur1 - chr3R 25407852 intron Fur1 - chr3R_15_25405001 chr3R_25405001 RAL-306_125b 3080 chr3R 25411730 25411793 chr3R 25411876 25411946 19 147 4.0 5.5 4.8 3.3 216 chr3R 25411730 intron Fur1 - chr3R 25411838 intron Fur1 - chr3R 25411946 intron Fur1 - chr3R_19_25410001 chr3R_25410001 RAL-306_125b 3081 chr3R 25422023 25422091 chr3R 25422154 25422240 13 137 10.0 0.0 5.0 2.2 217 chr3R 25422023 intron Fur1 - chr3R 25422132 intron Fur1 - chr3R 25422240 intron Fur1 - chr3R_13_25420001 chr3R_25420001 RAL-306_125b 3082 chr3R 25431393 25431445 chr3R 25431529 25431581 16 136 12.0 12.5 12.2 1.2 188 chr3R 25431393 intron Fur1 - chr3R 25431487 intron Fur1 - chr3R 25431581 intron Fur1 - chr3R_16_25430001 chr3R_25430001 RAL-306_125b 3083 chr3R 25431801 25431837 chr3R 25431976 25432012 13 174 9.5 6.5 8.0 1.4 211 chr3R 25431801 intron Fur1 - chr3R 25431906 intron Fur1 - chr3R 25432012 intron Fur1 - chr3R_13_25430001 chr3R_25430001 RAL-306_125b 3084 chr3R 25431838 25431864 chr3R 25431967 25432039 9 170 5.0 4.5 4.8 1.6 201 chr3R 25431838 intron Fur1 - chr3R 25431938 5` UTR Fur1 - chr3R 25432039 intron Fur1 - chr3R_9_25430001 chr3R_25430001 RAL-306_125b 3085 chr3R 25448789 25448855 chr3R 25448915 25448981 5 126 13.0 8.5 10.8 0.4 192 chr3R 25448789 intron Fur1 - chr3R 25448885 intron Fur1 - chr3R 25448981 intron Fur1 - chr3R_5_25445001 chr3R_25445001 RAL-306_125b 3086 chr3R 25465006 25465088 chr3R 25465133 25465215 11 127 2.0 4.5 3.2 2.6 209 chr3R 25465006 intron Fur1 - chr3R 25465110 intron Fur1 - chr3R 25465215 intron Fur1 - chr3R_11_25465001 chr3R_25465001 RAL-306_125b 3087 chr3R 25669030 25669093 chr3R 25669174 25669205 10 140 5.0 3.0 4.0 2.0 175 chr3R 25669030 intron Lgr3 + chr3R 25669118 intron Lgr3 + chr3R 25669205 exon Lgr3 + chr3R_10_25665001 chr3R_25665001 RAL-306_125b 3088 chr3R 25671201 25671270 chr3R 25671349 25671420 17 149 8.5 6.5 7.5 2.0 219 chr3R 25671201 intron Lgr3 + chr3R 25671310 intron Lgr3 + chr3R 25671420 intron Lgr3 + chr3R_17_25670001 chr3R_25670001 RAL-306_125b 3089 chr3R 25689087 25689145 chr3R 25689245 25689303 23 156 12.0 8.5 10.2 2.1 216 chr3R 25689087 intergenic not near genes chr3R 25689195 intergenic not near genes chr3R 25689303 intergenic not near genes chr3R_23_25685001 chr3R_25685001 RAL-306_125b 3090 chr3R 25721234 25721294 chr3R 25721351 25721418 15 125 4.5 4.0 4.2 2.9 184 chr3R 25721234 intron LpR2 - chr3R 25721326 intron LpR2 - chr3R 25721418 intron LpR2 - chr3R_15_25720001 chr3R_25720001 RAL-306_125b 3091 chr3R 25725793 25725857 chr3R 25735003 25735011 roo 28 9208 10.5 11.0 10.8 2.4 9218 chr3R 25725793 intron LpR2 - chr3R 25730402 intron LpR2 - chr3R 25735011 intron LpR2 - chr3R_28_25730001 chr3R_25730001 RAL-306_125b 3092 chr3R 25738590 25738664 chr3R 25738726 25738797 30 134 8.0 10.0 9.0 3.0 207 chr3R 25738590 intron LpR2 - chr3R 25738694 intron LpR2 - chr3R 25738797 intron LpR2 - chr3R_30_25735001 chr3R_25735001 RAL-306_125b 3093 chr3R 25755700 25755772 chr3R 25755838 25755910 21 138 2.0 5.0 3.5 4.7 210 chr3R 25755700 intron LpR1 - chr3R 25755805 intron LpR1 - chr3R 25755910 intron LpR1 - chr3R_21_25755001 chr3R_25755001 RAL-306_125b 3094 chr3R 25796331 25796412 chr3R 25796460 25796541 12 127 1.5 1.0 1.2 5.5 210 chr3R 25796331 intergenic CR43847 - chr3R 25796436 intergenic CR43847 - chr3R 25796541 intergenic CR43847 - chr3R_12_25795001 chr3R_25795001 RAL-306_125b 3095 chr3R 25832649 25832714 chr3R 25841881 25841938 roo 15 9231 3.5 5.0 4.2 2.9 9289 chr3R 25832649 exon alpha4GT2 + chr3R 25837294 intron alpha4GT2 + chr3R 25841938 exon alpha4GT2 + chr3R_15_25835001 chr3R_25835001 RAL-306_125b 3096 chr3R 25843598 25843667 chr3R 25843778 25843847 25 178 4.5 7.0 5.8 3.7 249 chr3R 25843598 intergenic CR45653 + chr3R 25843722 intergenic CR45653 + chr3R 25843847 intergenic CR45653 + chr3R_25_25840001 chr3R_25840001 RAL-306_125b 3097 chr3R 25861776 25861848 chr3R 25861903 25861975 28 126 4.5 5.5 5.0 4.7 199 chr3R 25861776 intron CG5890 + chr3R 25861876 intron CG5890 + chr3R 25861975 intron CG5890 + chr3R_28_25860001 chr3R_25860001 RAL-306_125b 3098 chr3R 25871052 25871123 chr3R 25871237 25871308 16 182 10.0 13.5 11.8 1.2 256 chr3R 25871052 3` UTR CG5890 + chr3R 25871180 3` UTR CG5890 + chr3R 25871308 3` UTR CG5890 + chr3R_16_25870001 chr3R_25870001 RAL-306_125b 3099 chr3R 26018646 26018677 chr3R 26018781 26018815 5 135 17.5 5.5 11.5 0.4 169 chr3R 26018646 3` UTR CR43643 - chr3R 26018730 3` UTR CR43643 - chr3R 26018815 3` UTR CR43643 - chr3R_5_26015001 chr3R_26015001 RAL-306_125b 3100 chr3R 26038929 26038989 chr3R 26039116 26039176 16 186 13.0 0.5 6.8 2.1 247 chr3R 26038929 intergenic not near genes chr3R 26039052 intergenic not near genes chr3R 26039176 intergenic not near genes chr3R_16_26035001 chr3R_26035001 RAL-306_125b 3101 chr3R 26122414 26122478 chr3R 26122540 26122604 20 124 3.5 7.0 5.2 3.2 190 chr3R 26122414 intron CG31324 + chr3R 26122509 intron CG31324 + chr3R 26122604 intron CG31324 + chr3R_20_26120001 chr3R_26120001 RAL-306_125b 3102 chr3R 26122949 26122993 chr3R 26123076 26123119 11 127 11.5 15.0 13.2 0.8 170 chr3R 26122949 intron CG31324 + chr3R 26123034 intron CG31324 + chr3R 26123119 intron CG31324 + chr3R_11_26120001 chr3R_26120001 RAL-306_125b 3103 chr3R 26126502 26126569 chr3R 26126638 26126705 18 136 18.0 16.0 17.0 1.0 203 chr3R 26126502 intron CG31324 + chr3R 26126604 intron CG31324 + chr3R 26126705 intron,5` UTR CG31324 +,CG14556 + chr3R_18_26125001 chr3R_26125001 RAL-306_125b 3104 chr3R 26140484 26140547 chr3R 26140647 26140710 5 160 25.0 26.0 25.5 0.2 226 chr3R 26140484 intergenic not near genes chr3R 26140597 intergenic not near genes chr3R 26140710 intergenic not near genes chr3R_5_26140001 chr3R_26140001 RAL-306_125b 3105 chr3R 26155397 26155451 chr3R 26155531 26155585 4 134 18.0 22.0 20.0 0.2 188 chr3R 26155397 intergenic not near genes chr3R 26155491 intergenic not near genes chr3R 26155585 intergenic not near genes chr3R_4_26155001 chr3R_26155001 RAL-306_125b 3106 chr3R 26206490 26206550 chr3R 26206627 26206649 7 132 16.5 23.5 20.0 0.3 159 chr3R 26206490 intron CR44320 + chr3R 26206570 intron CR44320 + chr3R 26206649 intron CR44320 + chr3R_7_26205001 chr3R_26205001 RAL-306_125b 3107 chr3R 26207631 26207704 chr3R 26207830 26207903 7 198 17.5 26.0 21.8 0.3 272 chr3R 26207631 intron CR44320 + chr3R 26207767 intron CR44320 + chr3R 26207903 intron CR44320 + chr3R_7_26205001 chr3R_26205001 RAL-306_125b 3108 chr3R 26215743 26215793 chr3R 26221749 26221786 297 10 6003 7.0 7.5 7.2 1.2 6043 chr3R 26215743 intergenic not near genes chr3R 26218764 intergenic not near genes chr3R 26221786 intergenic not near genes chr3R_10_26215001 chr3R_26215001 RAL-306_125b 3109 chr3R 26235477 26235480 chr3R 26235598 26235612 4 127 11.0 11.0 11.0 0.3 135 chr3R 26235477 5` UTR CR42745 + chr3R 26235544 5` UTR CR42745 + chr3R 26235612 intron CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-306_125b 3110 chr3R 26235481 26235518 chr3R 26235572 26235650 18 122 5.0 5.0 5.0 3.0 169 chr3R 26235481 5` UTR CR42745 + chr3R 26235566 5` UTR CR42745 + chr3R 26235650 intron CR42745 + chr3R_18_26235001 chr3R_26235001 RAL-306_125b 3111 chr3R 26239781 26239857 chr3R 26240142 26240218 26 359 5.5 5.5 5.5 4.0 437 chr3R 26239781 intron CR42745 + chr3R 26240000 intron CR42745 + chr3R 26240218 intron CR42745 + chr3R_26_26235001 chr3R_26235001 RAL-306_125b 3112 chr3R 26265781 26265841 chr3R 26265909 26265954 19 132 10.5 8.0 9.2 1.9 173 chr3R 26265781 intron CG6154 + chr3R 26265868 intron CG6154 + chr3R 26265954 intron CG6154 + chr3R_19_26265001 chr3R_26265001 RAL-306_125b 3113 chr3R 26292066 26292121 chr3R 26292196 26292251 20 128 9.0 9.5 9.2 2.0 185 chr3R 26292066 intergenic not near genes chr3R 26292158 intergenic not near genes chr3R 26292251 intergenic not near genes chr3R_20_26290001 chr3R_26290001 RAL-306_125b 3114 chr3R 26294676 26294746 chr3R 26294804 26294861 25 127 6.0 9.5 7.8 2.8 185 chr3R 26294676 intergenic not near genes chr3R 26294768 intergenic not near genes chr3R 26294861 intergenic not near genes chr3R_25_26290001 chr3R_26290001 RAL-306_125b 3115 chr3R 26318571 26318627 chr3R 26318711 26318767 9 140 10.0 13.0 11.5 0.7 196 chr3R 26318571 5` UTR CG33970 + chr3R 26318669 5` UTR CG33970 + chr3R 26318767 5` UTR CG33970 + chr3R_9_26315001 chr3R_26315001 RAL-306_125b 3116 chr3R 26325320 26325393 chr3R 26325457 26325520 11 140 14.0 6.5 10.2 1.0 200 chr3R 26325320 intron CG33970 + chr3R 26325420 intron CG33970 + chr3R 26325520 intron CG33970 + chr3R_11_26325001 chr3R_26325001 RAL-306_125b 3117 chr3R 26325675 26325701 chr3R 26325791 26325839 5 132 26.0 24.0 25.0 0.2 164 chr3R 26325675 intron CG33970 + chr3R 26325757 intron CG33970 + chr3R 26325839 intron CG33970 + chr3R_5_26325001 chr3R_26325001 RAL-306_125b 3118 chr3R 26326645 26326677 chr3R 26326773 26326805 5 128 10.5 11.5 11.0 0.4 160 chr3R 26326645 intron CG33970 + chr3R 26326725 intron CG33970 + chr3R 26326805 intron CG33970 + chr3R_5_26325001 chr3R_26325001 RAL-306_125b 3119 chr3R 26349218 26349240 chr3R 26349364 26349385 6 146 10.0 0.0 5.0 1.0 167 chr3R 26349218 intron CG33970 + chr3R 26349302 intron CG33970 + chr3R 26349385 intron CG33970 + chr3R_6_26345001 chr3R_26345001 RAL-306_125b 3120 chr3R 26376284 26376358 chr3R 26385494 26385582 roo 12 9214 7.0 0.5 3.8 2.5 9298 chr3R 26376284 intergenic not near genes chr3R 26380933 intergenic not near genes chr3R 26385582 intergenic not near genes chr3R_12_26380001 chr3R_26380001 RAL-306_125b 3121 chr3R 26387278 26387349 chr3R 26387405 26387476 12 120 12.5 6.5 9.5 1.1 198 chr3R 26387278 intergenic not near genes chr3R 26387377 intergenic not near genes chr3R 26387476 intergenic not near genes chr3R_12_26385001 chr3R_26385001 RAL-306_125b 3122 chr3R 26405870 26405939 chr3R 26405996 26406065 21 125 0.5 8.5 4.5 3.8 195 chr3R 26405870 intergenic not near genes chr3R 26405968 intergenic not near genes chr3R 26406065 intergenic not near genes chr3R_21_26405001 chr3R_26405001 RAL-306_125b 3123 chr3R 26442341 26442347 chr3R 26442461 26442474 6 126 7.0 8.5 7.8 0.7 133 chr3R 26442341 intron tx + chr3R 26442408 intron tx + chr3R 26442474 intron tx + chr3R_6_26440001 chr3R_26440001 RAL-306_125b 3124 chr3R 26510475 26510529 chr3R 26519580 26519634 roo 12 9105 10.5 4.5 7.5 1.4 9159 chr3R 26510475 intron plum - chr3R 26515054 intron plum - chr3R 26519634 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 RAL-306_125b 3125 chr3R 26531620 26531661 chr3R 26531770 26531811 8 144 10.0 13.5 11.8 0.6 191 chr3R 26531620 intron plum - chr3R 26531716 intron plum - chr3R 26531811 intron plum - chr3R_8_26530001 chr3R_26530001 RAL-306_125b 3126 chr3R 26531664 26531672 chr3R 26531764 26531822 5 135 8.0 12.5 10.2 0.4 158 chr3R 26531664 intron plum - chr3R 26531743 intron plum - chr3R 26531822 intron plum - chr3R_5_26530001 chr3R_26530001 RAL-306_125b 3127 chr3R 26531676 26531691 chr3R 26531758 26531779 5 122 7.0 10.5 8.8 0.5 103 chr3R 26531676 intron plum - chr3R 26531728 intron plum - chr3R 26531779 intron plum - chr3R_5_26530001 chr3R_26530001 RAL-306_125b 3128 chr3R 26542001 26542068 chr3R 26542142 26542209 18 138 5.5 5.0 5.2 2.9 208 chr3R 26542001 intron scrib + chr3R 26542105 intron scrib + chr3R 26542209 intron scrib + chr3R_18_26540001 chr3R_26540001 RAL-306_125b 3129 chr3R 26558284 26558357 chr3R 26565646 26565719 Stalker4 16 7356 8.0 5.0 6.5 2.1 7435 chr3R 26558284 intron scrib + chr3R 26562002 intron scrib + chr3R 26565719 intron scrib + chr3R_16_26560001 chr3R_26560001 RAL-306_125b 3130 chr3R 26641588 26641662 chr3R 26641725 26641777 14 134 10.0 8.5 9.2 1.4 189 chr3R 26641588 intergenic not near genes chr3R 26641682 intergenic not near genes chr3R 26641777 intergenic not near genes chr3R_14_26640001 chr3R_26640001 RAL-306_125b 3131 chr3R 26642689 26642712 chr3R 26643132 26643155 jockey 4 440 24.0 17.5 20.8 0.2 466 chr3R 26642689 intergenic not near genes chr3R 26642922 intergenic not near genes chr3R 26643155 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-306_125b 3132 chr3R 26642713 26642748 chr3R 26643130 26643158 jockey 17 438 15.0 17.0 16.0 1.0 445 chr3R 26642713 intergenic not near genes chr3R 26642936 intergenic not near genes chr3R 26643158 intergenic not near genes chr3R_17_26640001 chr3R_26640001 RAL-306_125b 3133 chr3R 26669614 26669687 chr3R 26669746 26669809 23 131 4.5 6.5 5.5 3.5 195 chr3R 26669614 intron beat-VII - chr3R 26669712 intron beat-VII - chr3R 26669809 intron beat-VII - chr3R_23_26665001 chr3R_26665001 RAL-306_125b 3134 chr3R 26740249 26740321 chr3R 26740369 26740447 17 125 14.0 11.5 12.8 1.2 198 chr3R 26740249 intergenic not near genes chr3R 26740348 intergenic not near genes chr3R 26740447 intergenic not near genes chr3R_17_26740001 chr3R_26740001 RAL-306_125b 3135 chr3R 26751050 26751075 chr3R 26751191 26751212 10 140 19.0 19.0 19.0 0.5 162 chr3R 26751050 intergenic not near genes chr3R 26751131 intergenic not near genes chr3R 26751212 intergenic not near genes chr3R_10_26750001 chr3R_26750001 RAL-306_125b 3136 chr3R 26755673 26755699 chr3R 26755786 26755800 4 116 9.5 16.0 12.8 0.3 127 chr3R 26755673 intergenic not near genes chr3R 26755736 intergenic not near genes chr3R 26755800 intergenic not near genes chr3R_4_26755001 chr3R_26755001 RAL-306_125b 3137 chr3R 26770201 26770267 chr3R 26770328 26770394 15 127 21.5 20.0 20.8 0.7 193 chr3R 26770201 intergenic CR45563 + chr3R 26770298 intergenic CR45563 + chr3R 26770394 intergenic not near genes chr3R_15_26770001 chr3R_26770001 RAL-306_125b 3138 chr3R 26810506 26810566 chr3R 26811041 26811101 roo 16 534 8.5 7.0 7.8 1.8 595 chr3R 26810506 intron Tl + chr3R 26810804 intron Tl + chr3R 26811101 intron Tl + chr3R_16_26810001 chr3R_26810001 RAL-306_125b 3139 chr3R 26824266 26824325 chr3R 26824433 26824492 15 165 15.5 14.0 14.8 0.9 226 chr3R 26824266 intron Tl + chr3R 26824379 intron Tl + chr3R 26824492 intron Tl + chr3R_15_26820001 chr3R_26820001 RAL-306_125b 3140 chr3R 26825012 26825083 chr3R 26825138 26825209 10 126 21.0 22.0 21.5 0.4 197 chr3R 26825012 intron Tl + chr3R 26825110 intron Tl + chr3R 26825209 intron Tl + chr3R_10_26825001 chr3R_26825001 RAL-306_125b 3141 chr3R 26827329 26827382 chr3R 26827457 26827471 7 120 20.5 22.5 21.5 0.3 142 chr3R 26827329 intron Tl + chr3R 26827400 intron Tl + chr3R 26827471 intron Tl + chr3R_7_26825001 chr3R_26825001 RAL-306_125b 3142 chr3R 26845534 26845561 chr3R 26845662 26845691 8 130 16.5 13.0 14.8 0.5 157 chr3R 26845534 intron Lerp - chr3R 26845612 intron Lerp - chr3R 26845691 intron Lerp - chr3R_8_26845001 chr3R_26845001 RAL-306_125b 3143 chr3R 26845562 26845591 chr3R 26845658 26845721 7 125 12.0 11.5 11.8 0.5 159 chr3R 26845562 intron Lerp - chr3R 26845642 intron Lerp - chr3R 26845721 intron Lerp - chr3R_7_26845001 chr3R_26845001 RAL-306_125b 3144 chr3R 26901491 26901492 chr3R 26901626 26901627 4 135 19.0 1.0 10.0 0.4 136 chr3R 26901491 intron T48 + chr3R 26901559 intron T48 + chr3R 26901627 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-306_125b 3145 chr3R 26927920 26927991 chr3R 26928310 26928381 28 388 9.5 7.5 8.5 2.9 461 chr3R 26927920 intron sda + chr3R 26928150 intron sda + chr3R 26928381 intron sda + chr3R_28_26925001 chr3R_26925001 RAL-306_125b 3146 chr3R 27007361 27007435 chr3R 27016546 27016604 roo 18 9183 9.0 6.0 7.5 2.1 9243 chr3R 27007361 intron RYa-R + chr3R 27011982 intron RYa-R + chr3R 27016604 intron RYa-R + chr3R_18_27010001 chr3R_27010001 RAL-306_125b 3147 chr3R 27027630 27027699 chr3R 27027764 27027831 21 133 6.0 3.0 4.5 3.8 201 chr3R 27027630 intron RYa-R + chr3R 27027730 intron RYa-R + chr3R 27027831 intron RYa-R + chr3R_21_27025001 chr3R_27025001 RAL-306_125b 3148 chr3R 27028677 27028751 chr3R 27028806 27028880 21 129 9.0 6.0 7.5 2.5 203 chr3R 27028677 exon RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028880 intron RYa-R + chr3R_21_27025001 chr3R_27025001 RAL-306_125b 3149 chr3R 27030171 27030249 chr3R 27030350 27030426 23 174 6.0 0.0 3.0 5.8 255 chr3R 27030171 intron RYa-R + chr3R 27030298 intron RYa-R + chr3R 27030426 intron RYa-R + chr3R_23_27030001 chr3R_27030001 RAL-306_125b 3150 chr3R 27077056 27077127 chr3R 27077186 27077228 20 125 9.0 7.5 8.2 2.2 172 chr3R 27077056 intron CG14257 + chr3R 27077142 intron CG14257 + chr3R 27077228 intron CG14257 + chr3R_20_27075001 chr3R_27075001 RAL-306_125b 3151 chr3R 27140467 27140543 chr3R 27148127 27148203 412 26 7658 9.5 8.5 9.0 2.6 7736 chr3R 27140467 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148203 intron CG6051 - chr3R_26_27140001 chr3R_27140001 RAL-306_125b 3152 chr3R 27192646 27192673 chr3R 27192768 27192785 8 123 8.5 9.5 9.0 0.8 139 chr3R 27192646 intron Ser - chr3R 27192716 intron Ser - chr3R 27192785 intron Ser - chr3R_8_27190001 chr3R_27190001 RAL-306_125b 3153 chr3R 27195544 27195549 chr3R 27195680 27195685 5 135 13.5 10.0 11.8 0.4 141 chr3R 27195544 intergenic not near genes chr3R 27195614 intergenic not near genes chr3R 27195685 intergenic not near genes chr3R_5_27195001 chr3R_27195001 RAL-306_125b 3154 chr3R 27195552 27195601 chr3R 27195663 27195717 18 132 7.0 7.5 7.2 2.2 165 chr3R 27195552 intergenic not near genes chr3R 27195634 intergenic not near genes chr3R 27195717 intergenic not near genes chr3R_18_27195001 chr3R_27195001 RAL-306_125b 3155 chr3R 27225546 27225612 chr3R 27225687 27225753 19 141 7.0 9.0 8.0 2.1 207 chr3R 27225546 intergenic not near genes chr3R 27225650 intergenic not near genes chr3R 27225753 intergenic not near genes chr3R_19_27225001 chr3R_27225001 RAL-306_125b 3156 chr3R 27292266 27292306 chr3R 27292392 27292408 14 147 6.5 2.0 4.2 2.7 142 chr3R 27292266 intergenic CG3348 - chr3R 27292337 intergenic CG3348 - chr3R 27292408 intergenic CG3348 - chr3R_14_27290001 chr3R_27290001 RAL-306_125b 3157 chr3R 27315951 27316012 chr3R 27316077 27316137 15 121 6.0 3.0 4.5 2.7 186 chr3R 27315951 intron CG3339 - chr3R 27316044 intron CG3339 - chr3R 27316137 exon CG3339 - chr3R_15_27315001 chr3R_27315001 RAL-306_125b 3158 chr3R 27329430 27329498 chr3R 27329557 27329625 14 126 10.5 9.0 9.8 1.3 195 chr3R 27329430 intergenic CG3330 - chr3R 27329528 intergenic CG3330 - chr3R 27329625 intergenic CG3330 - chr3R_14_27325001 chr3R_27325001 RAL-306_125b 3159 chr3R 27342749 27342826 chr3R 27351380 27351432 Tirant 13 8628 6.0 12.0 9.0 1.3 8683 chr3R 27342749 intron CG42534 + chr3R 27347090 intron CG42534 + chr3R 27351432 intron CG42534 + chr3R_13_27345001 chr3R_27345001 RAL-306_125b 3160 chr3R 27371522 27371568 chr3R 27371652 27371655 4 106 6.0 8.0 7.0 0.5 133 chr3R 27371522 intergenic CG42534 + chr3R 27371588 intergenic CG42534 + chr3R 27371655 intergenic CG42534 + chr3R_4_27370001 chr3R_27370001 RAL-306_125b 3161 chr3R 27377425 27377498 chr3R 27377563 27377628 20 135 4.5 3.5 4.0 4.0 203 chr3R 27377425 3` UTR side - chr3R 27377526 3` UTR side - chr3R 27377628 3` UTR side - chr3R_20_27375001 chr3R_27375001 RAL-306_125b 3162 chr3R 27398521 27398602 chr3R 27398647 27398729 15 124 2.0 3.0 2.5 4.3 208 chr3R 27398521 intron side - chr3R 27398625 intron side - chr3R 27398729 intron side - chr3R_15_27395001 chr3R_27395001 RAL-306_125b 3163 chr3R 27483058 27483139 chr3R 27483236 27483242 23 167 2.5 6.5 4.5 4.2 184 chr3R 27483058 intergenic Cyp6a18 + chr3R 27483150 intergenic Cyp6a18 + chr3R 27483242 intergenic Cyp6a18 + chr3R_23_27480001 chr3R_27480001 RAL-306_125b 3164 chr3R 27492333 27492395 chr3R 27492470 27492512 12 135 0.0 0.5 0.2 10.0 179 chr3R 27492333 intergenic not near genes chr3R 27492422 intergenic not near genes chr3R 27492512 intergenic not near genes chr3R_12_27490001 chr3R_27490001 RAL-306_125b 3165 chr3R 27496554 27496590 chr3R 27496709 27496723 13 152 13.5 4.0 8.8 1.3 169 chr3R 27496554 intergenic not near genes chr3R 27496638 intergenic not near genes chr3R 27496723 intergenic not near genes chr3R_13_27495001 chr3R_27495001 RAL-306_125b 3166 chr3R 27496592 27496601 chr3R 27496703 27496756 5 146 10.0 3.5 6.8 0.6 164 chr3R 27496592 intergenic not near genes chr3R 27496674 intergenic not near genes chr3R 27496756 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-306_125b 3167 chr3R 27517392 27517397 chr3R 27517547 27517552 5 155 23.5 8.5 16.0 0.3 160 chr3R 27517392 intergenic CG13972 - chr3R 27517472 intergenic CG13972 - chr3R 27517552 intergenic CG13972 - chr3R_5_27515001 chr3R_27515001 RAL-306_125b 3168 chr3R 27517412 27517452 chr3R 27517541 27517607 16 152 7.0 7.5 7.2 2.0 195 chr3R 27517412 intergenic CG13972 - chr3R 27517510 intergenic CG13972 - chr3R 27517607 intergenic CG13972 - chr3R_16_27515001 chr3R_27515001 RAL-306_125b 3169 chr3R 27521118 27521177 chr3R 27530377 27530436 roo 27 9259 6.0 13.0 9.5 2.6 9318 chr3R 27521118 intron CG12885 + chr3R 27525777 intron CG12885 + chr3R 27530436 intron CG12885 + chr3R_27_27525001 chr3R_27525001 RAL-306_125b 3170 chr3R 27535750 27535765 chr3R 27535883 27535912 6 141 13.0 3.5 8.2 0.7 162 chr3R 27535750 intergenic CR44289 - chr3R 27535831 3` UTR CR44289 - chr3R 27535912 3` UTR CR44289 - chr3R_6_27535001 chr3R_27535001 RAL-306_125b 3171 chr3R 27535771 27535811 chr3R 27535882 27535949 8 129 6.0 3.5 4.8 1.4 178 chr3R 27535771 intergenic CR44289 - chr3R 27535860 3` UTR CR44289 - chr3R 27535949 3` UTR CR44289 - chr3R_8_27535001 chr3R_27535001 RAL-306_125b 3172 chr3R 27627039 27627117 chr3R 27627191 27627246 20 143 6.5 4.0 5.2 3.2 207 chr3R 27627039 intron Tusp + chr3R 27627142 intron Tusp + chr3R 27627246 intron Tusp + chr3R_20_27625001 chr3R_27625001 RAL-306_125b 3173 chr3R 27634078 27634121 chr3R 27634204 27634274 14 151 4.5 5.0 4.8 2.4 196 chr3R 27634078 3` UTR Tusp + chr3R 27634176 3` UTR Tusp + chr3R 27634274 3` UTR Tusp + chr3R_14_27630001 chr3R_27630001 RAL-306_125b 3174 chr3R 27643960 27644001 chr3R 27644096 27644142 15 136 6.5 7.5 7.0 1.9 182 chr3R 27643960 exon tau - chr3R 27644051 intron tau - chr3R 27644142 intron tau - chr3R_15_27640001 chr3R_27640001 RAL-306_125b 3175 chr3R 27648550 27648838 chr3R 27648670 27648965 17 123 13.5 0.0 6.8 2.2 415 chr3R 27648550 intron tau - chr3R 27648758 intron tau - chr3R 27648965 intron tau - chr3R_17_27645001 chr3R_27645001 RAL-306_125b 3176 chr3R 27660200 27660218 chr3R 27660331 27660349 4 131 16.0 11.5 13.8 0.3 149 chr3R 27660200 intergenic Mlc1 - chr3R 27660274 intergenic Mlc1 - chr3R 27660349 intergenic Mlc1 - chr3R_4_27660001 chr3R_27660001 RAL-306_125b 3177 chr3R 27706732 27706737 chr3R 27706859 27706864 6 127 24.5 12.0 18.2 0.3 132 chr3R 27706732 5` UTR CG12428 - chr3R 27706798 intergenic CG12428 -,CG12877 + chr3R 27706864 intergenic CG12428 -,CG12877 + chr3R_6_27705001 chr3R_27705001 RAL-306_125b 3178 chr3R 27706738 27706796 chr3R 27706856 27706923 23 125 13.5 11.5 12.5 1.7 185 chr3R 27706738 5` UTR CG12428 - chr3R 27706830 intergenic CG12428 -,CG12877 + chr3R 27706923 intergenic CG12428 -,CG12877 + chr3R_23_27705001 chr3R_27705001 RAL-306_125b 3179 chr3R 27725549 27725596 chr3R 27731042 27731089 I-element 5 5493 6.5 9.0 7.8 0.6 5540 chr3R 27725549 intergenic not near genes chr3R 27728319 intergenic not near genes chr3R 27731089 intergenic not near genes chr3R_5_27725001 chr3R_27725001 RAL-306_125b 3180 chr3R 27779226 27779280 chr3R 27779355 27779410 7 128 3.0 8.5 5.8 1.0 184 chr3R 27779226 exon CG34353 - chr3R 27779318 intron CG34353 - chr3R 27779410 intron CG34353 - chr3R_7_27775001 chr3R_27775001 RAL-306_125b 3181 chr3R 27799886 27799962 chr3R 27800018 27800094 31 129 6.5 6.5 6.5 4.1 208 chr3R 27799886 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800094 intron CG34353 - chr3R_31_27795001 chr3R_27795001 RAL-306_125b 3182 chr3R 27841063 27841134 chr3R 27841188 27841265 22 125 3.5 7.5 5.5 3.4 202 chr3R 27841063 intron CG34353 - chr3R 27841164 intron CG34353 - chr3R 27841265 intron CG34353 - chr3R_22_27840001 chr3R_27840001 RAL-306_125b 3183 chr3R 27856716 27856784 chr3R 27858249 27858317 hopper2 32 1529 10.5 11.5 11.0 2.7 1601 chr3R 27856716 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858317 intron CG34353 - chr3R_32_27855001 chr3R_27855001 RAL-306_125b 3184 chr3R 27862932 27862954 chr3R 27868288 27868310 Transpac 6 5356 1.5 10.5 6.0 0.9 5378 chr3R 27862932 intron CG34353 - chr3R 27865621 intron CG34353 - chr3R 27868310 intron CG34353 - chr3R_6_27865001 chr3R_27865001 RAL-306_125b 3185 chr3R 27875660 27875726 chr3R 27882765 27882808 297 24 7103 6.5 9.5 8.0 2.7 7148 chr3R 27875660 intron CG34353 - chr3R 27879234 intron CG34353 - chr3R 27882808 intron CG34353 - chr3R_24_27875001 chr3R_27875001 RAL-306_125b 3186 chr3R 27970786 27970794 chr3R 27970926 27970934 4 140 16.0 7.0 11.5 0.3 148 chr3R 27970786 intron betaTub97EF - chr3R 27970860 intron betaTub97EF - chr3R 27970934 intron betaTub97EF - chr3R_4_27970001 chr3R_27970001 RAL-306_125b 3187 chr3R 27973804 27973815 chr3R 27973935 27973946 6 131 19.5 6.5 13.0 0.4 142 chr3R 27973804 intron betaTub97EF - chr3R 27973875 intron betaTub97EF - chr3R 27973946 intron betaTub97EF - chr3R_6_27970001 chr3R_27970001 RAL-306_125b 3188 chr3R 27973824 27973878 chr3R 27973934 27974009 22 127 7.0 6.5 6.8 2.8 185 chr3R 27973824 intron betaTub97EF - chr3R 27973916 intron betaTub97EF - chr3R 27974009 intron betaTub97EF - chr3R_22_27970001 chr3R_27970001 RAL-306_125b 3189 chr3R 28068445 28068524 chr3R 28073937 28074016 I-element 9 5489 0.0 5.5 2.8 2.4 5571 chr3R 28068445 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28074016 intron CG34362 + chr3R_9_28070001 chr3R_28070001 RAL-306_125b 3190 chr3R 28118803 28118875 chr3R 28118934 28119006 19 129 6.5 9.0 7.8 2.2 203 chr3R 28118803 intergenic not near genes chr3R 28118904 intergenic not near genes chr3R 28119006 intergenic not near genes chr3R_19_28115001 chr3R_28115001 RAL-306_125b 3191 chr3R 28137647 28137668 chr3R 28137777 28137798 6 130 14.0 7.0 10.5 0.5 151 chr3R 28137647 intergenic not near genes chr3R 28137722 intergenic not near genes chr3R 28137798 intergenic not near genes chr3R_6_28135001 chr3R_28135001 RAL-306_125b 3192 chr3R 28137673 28137713 chr3R 28137768 28137839 10 126 7.5 7.5 7.5 1.2 166 chr3R 28137673 intergenic not near genes chr3R 28137756 intergenic not near genes chr3R 28137839 intergenic not near genes chr3R_10_28135001 chr3R_28135001 RAL-306_125b 3193 chr3R 28173629 28173646 chr3R 28181109 28181126 mdg1 4 7478 20.5 6.0 13.2 0.3 7497 chr3R 28173629 intron CG34354 + chr3R 28177378 intron CG34354 + chr3R 28181126 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-306_125b 3194 chr3R 28173649 28173686 chr3R 28181102 28181165 mdg1 17 7477 7.5 6.0 6.8 2.2 7516 chr3R 28173649 intron CG34354 + chr3R 28177407 intron CG34354 + chr3R 28181165 intron CG34354 + chr3R_17_28175001 chr3R_28175001 RAL-306_125b 3195 chr3R 28215776 28215838 chr3R 28215903 28215908 18 119 9.5 6.0 7.8 2.0 132 chr3R 28215776 intron CG34354 + chr3R 28215842 intron CG34354 + chr3R 28215908 intron CG34354 + chr3R_18_28215001 chr3R_28215001 RAL-306_125b 3196 chr3R 28253296 28253369 chr3R 28255856 28255882 jockey 16 2556 4.0 5.0 4.5 2.9 2586 chr3R 28253296 intergenic not near genes chr3R 28254589 intergenic not near genes chr3R 28255882 intergenic not near genes chr3R_16_28250001 chr3R_28250001 RAL-306_125b 3197 chr3R 28306612 28306680 chr3R 28306746 28306814 20 132 5.0 9.0 7.0 2.5 202 chr3R 28306612 intergenic not near genes chr3R 28306713 intergenic not near genes chr3R 28306814 intergenic not near genes chr3R_20_28305001 chr3R_28305001 RAL-306_125b 3198 chr3R 28393651 28393666 chr3R 28393801 28393816 10 150 13.5 6.0 9.8 0.9 165 chr3R 28393651 intergenic not near genes chr3R 28393734 intergenic not near genes chr3R 28393816 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-306_125b 3199 chr3R 28393672 28393725 chr3R 28393797 28393875 21 148 4.5 5.0 4.8 3.6 203 chr3R 28393672 intergenic not near genes chr3R 28393774 intergenic not near genes chr3R 28393875 intergenic not near genes chr3R_21_28390001 chr3R_28390001 RAL-306_125b 3200 chr3R 28402991 28403058 chr3R 28403159 28403226 5 162 2.5 7.0 4.8 0.9 235 chr3R 28402991 intergenic not near genes chr3R 28403108 intergenic not near genes chr3R 28403226 intergenic not near genes chr3R_5_28400001 chr3R_28400001 RAL-306_125b 3201 chr3R 28407004 28407025 chr3R 28407143 28407168 6 140 11.0 0.5 5.8 0.9 164 chr3R 28407004 intergenic not near genes chr3R 28407086 intergenic not near genes chr3R 28407168 intergenic not near genes chr3R_6_28405001 chr3R_28405001 RAL-306_125b 3202 chr3R 28407028 28407036 chr3R 28407140 28407179 4 134 8.0 0.5 4.2 0.8 151 chr3R 28407028 intergenic not near genes chr3R 28407104 intergenic not near genes chr3R 28407179 intergenic not near genes chr3R_4_28405001 chr3R_28405001 RAL-306_125b 3203 chr3R 28417578 28417649 chr3R 28417719 28417786 10 136 5.0 5.5 5.2 1.6 208 chr3R 28417578 intergenic not near genes chr3R 28417682 intergenic not near genes chr3R 28417786 intergenic beat-VI + chr3R_10_28415001 chr3R_28415001 RAL-306_125b 3204 chr3R 28454160 28454226 chr3R 28454391 28454459 30 231 13.0 7.0 10.0 2.7 299 chr3R 28454160 intron beat-VI + chr3R 28454310 intron beat-VI + chr3R 28454459 intron beat-VI + chr3R_30_28450001 chr3R_28450001 RAL-306_125b 3205 chr3R 28469582 28469624 chr3R 28469713 28469755 12 127 6.5 6.0 6.2 1.7 173 chr3R 28469582 intron beat-VI + chr3R 28469668 intron beat-VI + chr3R 28469755 intron beat-VI + chr3R_12_28465001 chr3R_28465001 RAL-306_125b 3206 chr3R 28469626 28469629 chr3R 28469696 28469760 4 115 6.0 4.0 5.0 0.7 134 chr3R 28469626 intron beat-VI + chr3R 28469693 intron beat-VI + chr3R 28469760 intron beat-VI + chr3R_4_28465001 chr3R_28465001 RAL-306_125b 3207 chr3R 28478438 28478516 chr3R 28478564 28478622 29 123 9.0 7.5 8.2 3.2 184 chr3R 28478438 intergenic not near genes chr3R 28478530 intergenic not near genes chr3R 28478622 intergenic not near genes chr3R_29_28475001 chr3R_28475001 RAL-306_125b 3208 chr3R 28479097 28479168 chr3R 28479245 28479304 28 144 1.5 3.0 2.2 8.8 207 chr3R 28479097 intergenic not near genes chr3R 28479200 intergenic not near genes chr3R 28479304 intergenic not near genes chr3R_28_28475001 chr3R_28475001 RAL-306_125b 3209 chr3R 28554655 28554723 chr3R 28554796 28554856 19 140 6.0 6.0 6.0 2.7 201 chr3R 28554655 intergenic not near genes chr3R 28554756 intergenic not near genes chr3R 28554856 intergenic not near genes chr3R_19_28550001 chr3R_28550001 RAL-306_125b 3210 chr3R 28626147 28626222 chr3R 28626297 28626327 27 141 5.0 8.5 6.8 3.5 180 chr3R 28626147 intron CG10011 - chr3R 28626237 intron CG10011 - chr3R 28626327 intron CG10011 - chr3R_27_28625001 chr3R_28625001 RAL-306_125b 3211 chr3R 28702898 28702930 chr3R 28703022 28703064 11 132 6.5 7.0 6.8 1.4 166 chr3R 28702898 intron htt + chr3R 28702981 intron htt + chr3R 28703064 intron htt + chr3R_11_28700001 chr3R_28700001 RAL-306_125b 3212 chr3R 28702932 28702960 chr3R 28703021 28703094 8 128 4.0 6.5 5.2 1.3 162 chr3R 28702932 intron htt + chr3R 28703013 intron htt + chr3R 28703094 intron htt + chr3R_8_28700001 chr3R_28700001 RAL-306_125b 3213 chr3R 28758242 28758256 chr3R 28763909 28763920 roo 8 5667 23.0 0.0 11.5 0.6 5678 chr3R 28758242 intergenic aqrs - chr3R 28761081 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_8_28760001 chr3R_28760001 RAL-306_125b 3214 chr3R 28758272 28758318 chr3R 28771329 28771375 Stalker4 15 13057 9.0 6.5 7.8 1.7 13103 chr3R 28758272 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_15_28760001 chr3R_28760001 RAL-306_125b 3215 chr3R 28763907 28763921 chr3R 28771400 28771414 Stalker4 6 7493 0.0 19.0 9.5 0.6 7507 chr3R 28763907 intergenic not near genes chr3R 28767660 intergenic not near genes chr3R 28771414 intergenic not near genes chr3R_6_28765001 chr3R_28765001 RAL-306_125b 3216 chr3R 28792830 28792898 chr3R 28797971 28798043 jockey 10 5132 4.5 6.0 5.2 1.6 5213 chr3R 28792830 intergenic not near genes chr3R 28795436 intergenic not near genes chr3R 28798043 intergenic not near genes chr3R_10_28795001 chr3R_28795001 RAL-306_125b 3217 chr3R 28811526 28811598 chr3R 28811722 28811794 26 196 10.0 5.5 7.8 3.0 268 chr3R 28811526 intergenic wdn - chr3R 28811660 intergenic wdn -,CG1646 + chr3R 28811794 intergenic CG1646 +,wdn - chr3R_26_28810001 chr3R_28810001 RAL-306_125b 3218 chr3R 21907534 21907537 chr3R 28831801 28831802 77 6924266 30.0 17.0 23.5 3.1 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_77_25365001 chr3R_25365001 RAL-306_125b 3219 chr3R 28939724 28939777 chr3R 28939862 28939885 11 133 11.5 7.5 9.5 1.0 161 chr3R 28939724 intron CG14521 - chr3R 28939804 intron CG14521 - chr3R 28939885 intron CG14521 - chr3R_11_28935001 chr3R_28935001 RAL-306_125b 3220 chr3R 28971120 28971191 chr3R 28971251 28971321 21 131 9.0 7.5 8.2 2.3 201 chr3R 28971120 5` UTR CR45669 + chr3R 28971220 5` UTR CR45669 + chr3R 28971321 5` UTR CR45669 + chr3R_21_28970001 chr3R_28970001 RAL-306_125b 3221 chr3R 29006855 29006873 chr3R 29006977 29007000 4 126 8.5 8.0 8.2 0.4 145 chr3R 29006855 intron wat - chr3R 29006928 intron wat - chr3R 29007000 intron wat - chr3R_4_29005001 chr3R_29005001 RAL-306_125b 3222 chr3R 29009376 29009445 chr3R 29009568 29009622 28 191 8.0 11.0 9.5 2.7 246 chr3R 29009376 intron wat - chr3R 29009499 intron wat - chr3R 29009622 intron wat - chr3R_28_29005001 chr3R_29005001 RAL-306_125b 3223 chr3R 29032720 29032776 chr3R 29032821 29032909 16 126 9.0 6.5 7.8 1.8 189 chr3R 29032720 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032814 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032909 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_16_29030001 chr3R_29030001 RAL-306_125b 3224 chr3R 29067584 29067642 chr3R 29067782 29067843 11 199 5.0 7.5 6.2 1.5 259 chr3R 29067584 intron CG11873 + chr3R 29067714 intron CG11873 + chr3R 29067843 intron CG11873 + chr3R_11_29065001 chr3R_29065001 RAL-306_125b 3225 chr3R 29070007 29070077 chr3R 29070138 29070208 29 131 7.5 10.5 9.0 2.9 201 chr3R 29070007 intron CG11873 + chr3R 29070108 intron CG11873 + chr3R 29070208 intron CG11873 + chr3R_29_29070001 chr3R_29070001 RAL-306_125b 3226 chr3R 29079350 29079401 chr3R 29080772 29080822 NOF 17 1420 6.0 5.5 5.8 2.5 1472 chr3R 29079350 intron CG11873 + chr3R 29080086 intron CG11873 + chr3R 29080822 intron CG11873 + chr3R_17_29080001 chr3R_29080001 RAL-306_125b 3227 chr3R 29091391 29091431 chr3R 29091529 29091531 16 132 6.5 9.0 7.8 1.8 140 chr3R 29091391 intron CG11873 + chr3R 29091461 intron CG11873 + chr3R 29091531 intron CG11873 + chr3R_16_29090001 chr3R_29090001 RAL-306_125b 3228 chr3R 29176085 29176090 chr3R 29176224 29176229 5 139 12.5 8.5 10.5 0.4 144 chr3R 29176085 intron CG14509 - chr3R 29176157 intron CG14509 - chr3R 29176229 intron CG14509 - chr3R_5_29175001 chr3R_29175001 RAL-306_125b 3229 chr3R 29179594 29179674 chr3R 29180103 29180163 24 503 4.0 3.0 3.5 5.3 569 chr3R 29179594 intron CG14509 - chr3R 29179878 intron CG14509 - chr3R 29180163 intron CG14509 - chr3R_24_29175001 chr3R_29175001 RAL-306_125b 3230 chr3R 29186980 29186987 chr3R 29187143 29187150 5 163 23.5 5.5 14.5 0.3 170 chr3R 29186980 intron CG14509 - chr3R 29187065 intron CG14509 - chr3R 29187150 intron CG14509 - chr3R_5_29185001 chr3R_29185001 RAL-306_125b 3231 chr3R 29186988 29187043 chr3R 29187140 29187180 16 160 10.0 4.5 7.2 2.0 192 chr3R 29186988 intron CG14509 - chr3R 29187084 intron CG14509 - chr3R 29187180 intron CG14509 - chr3R_16_29185001 chr3R_29185001 RAL-306_125b 3232 chr3R 29237222 29237275 chr3R 29239291 29239345 8 2069 30.0 10.5 20.2 0.4 2123 chr3R 29237222 exon CG11951 - chr3R 29238284 intron CG11951 - chr3R 29239345 exon CG31427 - chr3R_8_29235001 chr3R_29235001 RAL-306_125b 3233 chr3R 29238725 29238785 chr3R 29238889 29238949 21 162 5.0 11.5 8.2 2.3 224 chr3R 29238725 intergenic CG11951 -,CG31427 - chr3R 29238837 3` UTR CG31427 - chr3R 29238949 3` UTR CG31427 - chr3R_21_29235001 chr3R_29235001 RAL-306_125b 3234 chr3R 29239208 29239237 chr3R 29245529 29245565 7 6320 4.5 22.5 13.5 0.5 6357 chr3R 29239208 exon CG31427 - chr3R 29242386 exon CG31445 - chr3R 29245565 exon SP1029 - chr3R_7_29240001 chr3R_29240001 RAL-306_125b 3235 chr3R 29240277 29240344 chr3R 29240411 29240430 18 126 7.5 6.0 6.8 2.3 153 chr3R 29240277 intron CG31427 - chr3R 29240354 5` UTR CG31427 - chr3R 29240430 intergenic CG31427 -,CG31445 - chr3R_18_29240001 chr3R_29240001 RAL-306_125b 3236 chr3R 29319772 29319848 chr3R 29320141 29320216 jockey 20 368 5.5 8.0 6.8 2.6 444 chr3R 29319772 intergenic Cnx99A - chr3R 29319994 intergenic Cnx99A - chr3R 29320216 intergenic not near genes chr3R_20_29315001 chr3R_29315001 RAL-306_125b 3237 chr3R 29332234 29332284 chr3R 29332361 29332411 19 126 11.0 5.5 8.2 2.1 177 chr3R 29332234 intergenic not near genes chr3R 29332322 intergenic not near genes chr3R 29332411 intergenic not near genes chr3R_19_29330001 chr3R_29330001 RAL-306_125b 3238 chr3R 29376310 29376360 chr3R 29376448 29376498 25 137 6.5 0.5 3.5 5.6 188 chr3R 29376310 intergenic not near genes chr3R 29376404 intergenic not near genes chr3R 29376498 intergenic not near genes chr3R_25_29375001 chr3R_29375001 RAL-306_125b 3239 chr3R 29383728 29383757 chr3R 29383871 29383900 13 142 3.0 17.0 10.0 1.2 172 chr3R 29383728 intron Ptp99A + chr3R 29383814 intron Ptp99A + chr3R 29383900 intron Ptp99A + chr3R_13_29380001 chr3R_29380001 RAL-306_125b 3240 chr3R 29402937 29402957 chr3R 29403082 29403102 8 144 18.0 9.5 13.8 0.5 165 chr3R 29402937 intron Ptp99A + chr3R 29403020 intron Ptp99A + chr3R 29403102 intron Ptp99A + chr3R_8_29400001 chr3R_29400001 RAL-306_125b 3241 chr3R 29402958 29403001 chr3R 29403078 29403146 12 141 7.5 9.5 8.5 1.3 188 chr3R 29402958 intron Ptp99A + chr3R 29403052 intron Ptp99A + chr3R 29403146 intron Ptp99A + chr3R_12_29400001 chr3R_29400001 RAL-306_125b 3242 chr3R 29406576 29406640 chr3R 29407912 29407976 jockey 17 1333 6.5 7.0 6.8 2.2 1400 chr3R 29406576 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407976 intron Ptp99A + chr3R_17_29405001 chr3R_29405001 RAL-306_125b 3243 chr3R 29430326 29430407 chr3R 29430482 29430566 12 155 7.5 4.5 6.0 1.7 240 chr3R 29430326 intron Ptp99A + chr3R 29430446 intron Ptp99A + chr3R 29430566 intron Ptp99A + chr3R_12_29430001 chr3R_29430001 RAL-306_125b 3244 chr3R 29439675 29439748 chr3R 29439813 29439887 28 130 5.0 9.0 7.0 3.5 212 chr3R 29439675 intron Ptp99A + chr3R 29439781 intron Ptp99A + chr3R 29439887 intron Ptp99A + chr3R_28_29435001 chr3R_29435001 RAL-306_125b 3245 chr3R 29446949 29447019 chr3R 29447086 29447149 23 134 7.5 6.0 6.8 2.9 200 chr3R 29446949 intron Ptp99A + chr3R 29447049 intron Ptp99A + chr3R 29447149 intron Ptp99A + chr3R_23_29445001 chr3R_29445001 RAL-306_125b 3246 chr3R 29449315 29449342 chr3R 29449443 29449470 7 128 18.5 11.5 15.0 0.4 155 chr3R 29449315 intron Ptp99A + chr3R 29449392 intron Ptp99A + chr3R 29449470 intron Ptp99A + chr3R_7_29445001 chr3R_29445001 RAL-306_125b 3247 chr3R 29449343 29449386 chr3R 29449441 29449513 15 125 11.0 10.5 10.8 1.3 170 chr3R 29449343 intron Ptp99A + chr3R 29449428 intron Ptp99A + chr3R 29449513 intron Ptp99A + chr3R_15_29445001 chr3R_29445001 RAL-306_125b 3248 chr3R 29508828 29508840 chr3R 29509013 29509025 9 185 0.0 5.5 2.8 2.4 197 chr3R 29508828 intergenic not near genes chr3R 29508926 intergenic not near genes chr3R 29509025 intergenic not near genes chr3R_9_29505001 chr3R_29505001 RAL-306_125b 3249 chr3R 29581488 29581560 chr3R 29581619 29581691 26 131 5.5 8.0 6.8 3.3 203 chr3R 29581488 intergenic not near genes chr3R 29581590 intergenic not near genes chr3R 29581691 intergenic not near genes chr3R_26_29580001 chr3R_29580001 RAL-306_125b 3250 chr3R 29606891 29606894 chr3R 29607019 29607022 4 128 20.0 5.5 12.8 0.3 131 chr3R 29606891 intron alph + chr3R 29606956 intron alph + chr3R 29607022 intron alph + chr3R_4_29605001 chr3R_29605001 RAL-306_125b 3251 chr3R 29606897 29606966 chr3R 29607016 29607094 31 126 5.5 5.0 5.2 5.0 197 chr3R 29606897 intron alph + chr3R 29606996 intron alph + chr3R 29607094 intron alph + chr3R_31_29605001 chr3R_29605001 RAL-306_125b 3252 chr3R 29627238 29627310 chr3R 29627699 29627772 15 457 3.5 7.5 5.5 2.3 534 chr3R 29627238 intergenic not near genes chr3R 29627505 intergenic not near genes chr3R 29627772 intergenic not near genes chr3R_15_29625001 chr3R_29625001 RAL-306_125b 3253 chr3R 29648965 29649014 chr3R 29649105 29649154 13 137 2.0 5.5 3.8 2.7 189 chr3R 29648965 intron Dop1R2 - chr3R 29649060 intron Dop1R2 - chr3R 29649154 intron Dop1R2 - chr3R_13_29645001 chr3R_29645001 RAL-306_125b 3254 chr3R 29719355 29719427 chr3R 29719491 29719563 20 136 6.5 8.0 7.2 2.4 208 chr3R 29719355 intron CG15506 + chr3R 29719459 intron CG15506 + chr3R 29719563 intron CG15506 + chr3R_20_29715001 chr3R_29715001 RAL-306_125b 3255 chr3R 29738223 29738294 chr3R 29739740 29739811 hobo 25 1511 6.5 9.0 7.8 2.8 1588 chr3R 29738223 intergenic CG1969 +,CG7598 + chr3R 29739017 intron CG1969 + chr3R 29739811 5` UTR CG1969 + chr3R_25_29735001 chr3R_29735001 RAL-306_125b 3256 chr3R 29759052 29759112 chr3R 29759521 29759578 8 466 4.5 2.0 3.2 1.9 526 chr3R 29759052 intergenic CR44953 - chr3R 29759315 intergenic CR44953 - chr3R 29759578 intergenic not near genes chr3R_8_29755001 chr3R_29755001 RAL-306_125b 3257 chr3R 29760319 29760380 chr3R 29761570 29761631 pogo 18 1251 9.5 10.5 10.0 1.6 1312 chr3R 29760319 intergenic not near genes chr3R 29760975 intergenic not near genes chr3R 29761631 intergenic not near genes chr3R_18_29760001 chr3R_29760001 RAL-306_125b 3258 chr3R 29782218 29782289 chr3R 29782344 29782405 24 122 6.0 7.0 6.5 3.2 187 chr3R 29782218 intron kay + chr3R 29782312 intron kay + chr3R 29782405 intron kay + chr3R_24_29780001 chr3R_29780001 RAL-306_125b 3259 chr3R 29843834 29843887 chr3R 29843964 29843995 19 126 7.5 10.0 8.8 1.9 161 chr3R 29843834 intron Cad99C + chr3R 29843914 intron Cad99C + chr3R 29843995 intron Cad99C + chr3R_19_29840001 chr3R_29840001 RAL-306_125b 3260 chr3R 29881978 29881996 chr3R 29891185 29891203 roo 6 9206 22.0 10.5 16.2 0.3 9225 chr3R 29881978 intron CG31038 + chr3R 29886590 intron CG31038 + chr3R 29891203 intron CG31038 + chr3R_6_29885001 chr3R_29885001 RAL-306_125b 3261 chr3R 29882004 29882044 chr3R 29891181 29891251 roo 10 9203 12.0 9.0 10.5 0.9 9247 chr3R 29882004 intron CG31038 + chr3R 29886628 intron CG31038 + chr3R 29891251 intron CG31038 + chr3R_10_29885001 chr3R_29885001 RAL-306_125b 3262 chr3R 29963431 29963496 chr3R 29963579 29963642 16 149 3.0 0.5 1.8 5.7 211 chr3R 29963431 intron TkR99D - chr3R 29963536 intron TkR99D - chr3R 29963642 intron TkR99D - chr3R_16_29960001 chr3R_29960001 RAL-306_125b 3263 chr3R 29966015 29966061 chr3R 29966141 29966188 14 123 3.5 9.0 6.2 1.9 173 chr3R 29966015 intron TkR99D - chr3R 29966102 intron TkR99D - chr3R 29966188 intron TkR99D - chr3R_14_29965001 chr3R_29965001 RAL-306_125b 3264 chr3R 29968727 29968788 chr3R 29968961 29969022 21 233 7.0 13.0 10.0 1.9 295 chr3R 29968727 intron TkR99D - chr3R 29968874 intron TkR99D - chr3R 29969022 5` UTR TkR99D - chr3R_21_29965001 chr3R_29965001 RAL-306_125b 3265 chr3R 30001698 30001746 chr3R 30001812 30001872 14 115 9.0 6.0 7.5 1.6 174 chr3R 30001698 3` UTR Tace + chr3R 30001785 intron Tace + chr3R 30001872 intron Tace + chr3R_14_30000001 chr3R_30000001 RAL-306_125b 3266 chr3R 30032118 30032181 chr3R 30032247 30032255 5 116 7.0 15.0 11.0 0.4 137 chr3R 30032118 intron Axn + chr3R 30032186 intron Axn + chr3R 30032255 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-306_125b 3267 chr3R 30046289 30046352 chr3R 30046457 30046513 31 171 8.0 6.0 7.0 3.9 224 chr3R 30046289 intergenic RpL32 -,CG7943 + chr3R 30046401 intergenic CG7943 +,RpL32 - chr3R 30046513 5` UTR CG7943 + chr3R_31_30045001 chr3R_30045001 RAL-306_125b 3268 chr3R 30061823 30061866 chr3R 30061940 30061994 11 120 9.0 4.0 6.5 1.5 171 chr3R 30061823 intron sima + chr3R 30061908 intron sima + chr3R 30061994 intron sima + chr3R_11_30060001 chr3R_30060001 RAL-306_125b 3269 chr3R 30077864 30077934 chr3R 30077996 30078071 30 136 6.5 6.0 6.2 4.2 207 chr3R 30077864 intron sima + chr3R 30077968 intron sima + chr3R 30078071 intron sima + chr3R_30_30075001 chr3R_30075001 RAL-306_125b 3270 chr3R 30084820 30084882 chr3R 30086337 30086353 hobo 17 1510 2.5 14.0 8.2 1.8 1533 chr3R 30084820 intron sima + chr3R 30085586 intron sima + chr3R 30086353 intron sima + chr3R_17_30085001 chr3R_30085001 RAL-306_125b 3271 chr3R 30088565 30088641 chr3R 30088701 30088753 20 132 0.0 3.5 1.8 7.1 188 chr3R 30088565 intron sima + chr3R 30088659 intron sima + chr3R 30088753 intron sima + chr3R_20_30085001 chr3R_30085001 RAL-306_125b 3272 chr3R 30210515 30210662 chr3R 30210661 30210792 8 148 0.0 0.0 0.0 8.0 277 chr3R 30210515 intergenic Anp +,CecA1 + chr3R 30210654 intergenic CecA1 +,Anp + chr3R 30210792 intergenic CecA1 +,Anp + chr3R_8_30210001 chr3R_30210001 RAL-306_125b 3273 chr3R 30224603 30224667 chr3R 30224731 30224795 23 127 8.5 6.0 7.2 2.8 192 chr3R 30224603 intergenic not near genes chr3R 30224699 intergenic not near genes chr3R 30224795 intergenic not near genes chr3R_23_30220001 chr3R_30220001 RAL-306_125b 3274 chr3R 30238728 30238753 chr3R 30239942 30239968 1360 8 1215 10.5 0.0 5.2 1.3 1240 chr3R 30238728 intergenic not near genes chr3R 30239348 intergenic not near genes chr3R 30239968 intergenic not near genes chr3R_8_30235001 chr3R_30235001 RAL-306_125b 3275 chr3R 30246234 30246332 chr3R 30246383 30246456 9 131 0.5 9.0 4.8 1.6 222 chr3R 30246234 intron CG9733 - chr3R 30246345 intron CG9733 - chr3R 30246456 intron CG9733 - chr3R_9_30245001 chr3R_30245001 RAL-306_125b 3276 chr3R 30267943 30267998 chr3R 30268074 30268134 15 135 4.0 7.5 5.8 2.2 191 chr3R 30267943 intergenic not near genes chr3R 30268038 intergenic not near genes chr3R 30268134 intergenic not near genes chr3R_15_30265001 chr3R_30265001 RAL-306_125b 3277 chr3R 30269609 30269626 chr3R 30269741 30269759 5 133 1.0 0.0 0.5 3.3 150 chr3R 30269609 intergenic not near genes chr3R 30269684 intergenic not near genes chr3R 30269759 intergenic not near genes chr3R_5_30265001 chr3R_30265001 RAL-306_125b 3278 chr3R 30269627 30269666 chr3R 30269730 30269799 15 129 1.0 0.0 0.5 10.0 172 chr3R 30269627 intergenic not near genes chr3R 30269713 intergenic not near genes chr3R 30269799 intergenic not near genes chr3R_15_30265001 chr3R_30265001 RAL-306_125b 3279 chr3R 30284493 30284542 chr3R 30284643 30284685 16 148 8.0 0.0 4.0 3.2 192 chr3R 30284493 intron hdc + chr3R 30284589 intron hdc + chr3R 30284685 intron hdc + chr3R_16_30280001 chr3R_30280001 RAL-306_125b 3280 chr3R 30287728 30287776 chr3R 30287855 30287901 14 130 6.0 3.0 4.5 2.5 173 chr3R 30287728 intron hdc + chr3R 30287814 intron hdc + chr3R 30287901 intron hdc + chr3R_14_30285001 chr3R_30285001 RAL-306_125b 3281 chr3R 30292331 30292382 chr3R 30292453 30292457 9 121 12.0 2.0 7.0 1.1 126 chr3R 30292331 intron hdc + chr3R 30292394 intron hdc + chr3R 30292457 intron hdc + chr3R_9_30290001 chr3R_30290001 RAL-306_125b 3282 chr3R 30298600 30298678 chr3R 30298729 30298772 27 124 13.0 12.0 12.5 2.0 172 chr3R 30298600 intron hdc + chr3R 30298686 intron hdc + chr3R 30298772 intron hdc + chr3R_27_30295001 chr3R_30295001 RAL-306_125b 3283 chr3R 30315587 30315609 chr3R 30315717 30315739 12 130 18.5 9.5 14.0 0.8 152 chr3R 30315587 intron hdc + chr3R 30315663 intron hdc + chr3R 30315739 intron hdc + chr3R_12_30315001 chr3R_30315001 RAL-306_125b 3284 chr3R 30317325 30317353 chr3R 30324967 30324995 roo 9 7640 0.5 17.0 8.8 0.9 7670 chr3R 30317325 intron hdc + chr3R 30321160 intron hdc + chr3R 30324995 intron hdc + chr3R_9_30320001 chr3R_30320001 RAL-306_125b 3285 chr3R 30331986 30332055 chr3R 30332115 30332184 20 127 4.5 9.5 7.0 2.5 198 chr3R 30331986 intron hdc + chr3R 30332085 intron hdc + chr3R 30332184 intron hdc + chr3R_20_30330001 chr3R_30330001 RAL-306_125b 3286 chr3R 30349638 30349693 chr3R 30350046 30350081 16 409 11.0 6.5 8.8 1.6 443 chr3R 30349638 intron hdc + chr3R 30349860 intron hdc + chr3R 30350081 intron hdc + chr3R_16_30345001 chr3R_30345001 RAL-306_125b 3287 chr3R 30374908 30374977 chr3R 30375071 30375140 18 155 9.0 6.5 7.8 2.0 232 chr3R 30374908 intergenic not near genes chr3R 30375024 intergenic not near genes chr3R 30375140 intergenic not near genes chr3R_18_30375001 chr3R_30375001 RAL-306_125b 3288 chr3R 30375508 30375556 chr3R 30383181 30383229 412 6 7673 9.0 7.0 8.0 0.7 7721 chr3R 30375508 intergenic not near genes chr3R 30379368 intergenic not near genes chr3R 30383229 intergenic not near genes chr3R_6_30375001 chr3R_30375001 RAL-306_125b 3289 chr3R 30396172 30396240 chr3R 30404488 30404500 roo 19 8311 8.5 6.0 7.2 2.3 8328 chr3R 30396172 intergenic not near genes chr3R 30400336 intergenic not near genes chr3R 30404500 5` UTR CR45570 + chr3R_19_30400001 chr3R_30400001 RAL-306_125b 3290 chr3R 30456354 30456419 chr3R 30456484 30456509 26 128 7.5 4.5 6.0 3.7 155 chr3R 30456354 intergenic CG2224 -,aralar1 - chr3R 30456432 intergenic CG2224 - chr3R 30456509 3` UTR CG2224 - chr3R_26_30455001 chr3R_30455001 RAL-306_125b 3291 chr3R 30457971 30458048 chr3R 30458101 30458123 20 127 1.5 6.5 4.0 4.0 152 chr3R 30457971 intron CG2224 - chr3R 30458047 intron CG2224 - chr3R 30458123 intron CG2224 - chr3R_20_30455001 chr3R_30455001 RAL-306_125b 3292 chr3R 30480445 30480503 chr3R 30482952 30483016 jockey 21 2510 4.0 7.0 5.5 3.2 2571 chr3R 30480445 intron PH4alphaEFB + chr3R 30481730 intron PH4alphaEFB + chr3R 30483016 intron PH4alphaEFB + chr3R_21_30480001 chr3R_30480001 RAL-306_125b 3293 chr3R 30498344 30498429 chr3R 30498606 30498679 15 249 0.0 8.0 4.0 3.0 335 chr3R 30498344 intron PH4alphaNE1 - chr3R 30498512 intron PH4alphaNE1 - chr3R 30498679 intron PH4alphaNE1 - chr3R_15_30495001 chr3R_30495001 RAL-306_125b 3294 chr3R 30521691 30521718 chr3R 30521830 30521857 4 139 10.0 0.0 5.0 0.7 166 chr3R 30521691 intron jdp - chr3R 30521774 intron jdp - chr3R 30521857 intron jdp - chr3R_4_30520001 chr3R_30520001 RAL-306_125b 3295 chr3R 30544689 30544713 chr3R 30544831 30544855 5 142 18.0 6.0 12.0 0.4 166 chr3R 30544689 intron tmod + chr3R 30544772 intron tmod + chr3R 30544855 intron tmod + chr3R_5_30540001 chr3R_30540001 RAL-306_125b 3296 chr3R 30544714 30544750 chr3R 30544820 30544892 13 136 15.5 4.5 10.0 1.2 178 chr3R 30544714 intron tmod + chr3R 30544803 intron tmod + chr3R 30544892 intron tmod + chr3R_13_30540001 chr3R_30540001 RAL-306_125b 3297 chr3R 30554349 30554425 chr3R 30554475 30554551 19 126 4.0 8.0 6.0 2.7 202 chr3R 30554349 intron tmod + chr3R 30554450 intron tmod + chr3R 30554551 intron tmod + chr3R_19_30550001 chr3R_30550001 RAL-306_125b 3298 chr3R 30558100 30558152 chr3R 30558231 30558283 9 131 11.0 13.0 12.0 0.7 183 chr3R 30558100 intron,intron tmod +,CG34155 - chr3R 30558192 intron,intron tmod +,CG34155 - chr3R 30558283 intron,intron tmod +,CG34155 - chr3R_9_30555001 chr3R_30555001 RAL-306_125b 3299 chr3R 30560312 30560384 chr3R 30560441 30560513 26 125 2.0 2.5 2.2 8.1 201 chr3R 30560312 intron tmod + chr3R 30560412 intron tmod + chr3R 30560513 intron tmod + chr3R_26_30560001 chr3R_30560001 RAL-306_125b 3300 chr3R 30592460 30592527 chr3R 30592620 30592687 16 154 6.0 2.5 4.2 3.1 227 chr3R 30592460 intergenic not near genes chr3R 30592574 intergenic CG2246 - chr3R 30592687 intergenic CG2246 - chr3R_16_30590001 chr3R_30590001 RAL-306_125b 3301 chr3R 30627568 30627591 chr3R 30627693 30627721 17 128 16.0 7.5 11.8 1.3 153 chr3R 30627568 3` UTR CG2267 - chr3R 30627644 exon CG2267 - chr3R 30627721 exon CG2267 - chr3R_17_30625001 chr3R_30625001 RAL-306_125b 3302 chr3R 30627594 30627611 chr3R 30627692 30627721 6 115 13.5 7.5 10.5 0.5 127 chr3R 30627594 3` UTR CG2267 - chr3R 30627658 exon CG2267 - chr3R 30627721 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-306_125b 3303 chr3R 30627612 30627632 chr3R 30627689 30627755 11 114 8.5 7.5 8.0 1.2 143 chr3R 30627612 exon CG2267 - chr3R 30627684 exon CG2267 - chr3R 30627755 exon CG2267 - chr3R_11_30625001 chr3R_30625001 RAL-306_125b 3304 chr3R 30655005 30655059 chr3R 30655118 30655188 19 125 11.5 8.5 10.0 1.7 183 chr3R 30655005 intergenic not near genes chr3R 30655096 intergenic not near genes chr3R 30655188 intergenic not near genes chr3R_19_30655001 chr3R_30655001 RAL-306_125b 3305 chr3R 30679474 30679547 chr3R 30686992 30687066 blood 15 7517 6.5 5.5 6.0 2.1 7592 chr3R 30679474 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687066 intergenic not near genes chr3R_15_30680001 chr3R_30680001 RAL-306_125b 3306 chr3R 30787846 30787899 chr3R 30787975 30788028 26 126 10.5 13.0 11.8 2.0 182 chr3R 30787846 3` UTR zfh1 + chr3R 30787937 3` UTR zfh1 + chr3R 30788028 3` UTR zfh1 + chr3R_26_30785001 chr3R_30785001 RAL-306_125b 3307 chr3R 30808187 30808256 chr3R 30808336 30808405 23 147 7.0 5.5 6.2 3.2 218 chr3R 30808187 intergenic dj-1beta +,cindr + chr3R 30808296 intergenic dj-1beta +,cindr + chr3R 30808405 intergenic cindr +,dj-1beta + chr3R_23_30805001 chr3R_30805001 RAL-306_125b 3308 chr3R 30818768 30818833 chr3R 30820383 30820437 1360 16 1611 4.0 9.5 6.8 2.1 1669 chr3R 30818768 intron cindr + chr3R 30819602 intron cindr + chr3R 30820437 intron cindr + chr3R_16_30815001 chr3R_30815001 RAL-306_125b 3309 chr3R 30850194 30850269 chr3R 30850336 30850411 26 142 3.0 7.0 5.0 4.3 217 chr3R 30850194 intergenic not near genes chr3R 30850302 intergenic not near genes chr3R 30850411 intergenic not near genes chr3R_26_30850001 chr3R_30850001 RAL-306_125b 3310 chr3R 30855753 30855787 chr3R 30855891 30855920 11 138 4.0 6.0 5.0 1.8 167 chr3R 30855753 intergenic not near genes chr3R 30855836 intergenic not near genes chr3R 30855920 intergenic not near genes chr3R_11_30855001 chr3R_30855001 RAL-306_125b 3311 chr3R 30927775 30927782 chr3R 30927908 30927915 6 133 15.0 19.0 17.0 0.3 140 chr3R 30927775 intron Ptx1 + chr3R 30927845 intron Ptx1 + chr3R 30927915 intron Ptx1 + chr3R_6_30925001 chr3R_30925001 RAL-306_125b 3312 chr3R 30937231 30937310 chr3R 30937452 30937530 24 217 6.5 2.5 4.5 4.4 299 chr3R 30937231 intergenic CG15550 - chr3R 30937380 intergenic CG15550 - chr3R 30937530 intergenic CG15550 - chr3R_24_30935001 chr3R_30935001 RAL-306_125b 3313 chr3R 30946349 30946403 chr3R 30946475 30946537 9 133 1.0 11.0 6.0 1.3 188 chr3R 30946349 intergenic not near genes chr3R 30946443 intergenic not near genes chr3R 30946537 intergenic not near genes chr3R_9_30945001 chr3R_30945001 RAL-306_125b 3314 chr3R 30973108 30973120 chr3R 30973319 30973331 7 211 3.0 8.5 5.8 1.0 223 chr3R 30973108 intron 5-HT7 - chr3R 30973220 intron 5-HT7 - chr3R 30973331 intron 5-HT7 - chr3R_7_30970001 chr3R_30970001 RAL-306_125b 3315 chr3R 30973124 30973164 chr3R 30973315 30973375 15 208 2.5 8.0 5.2 2.4 251 chr3R 30973124 intron 5-HT7 - chr3R 30973250 intron 5-HT7 - chr3R 30973375 intron 5-HT7 - chr3R_15_30970001 chr3R_30970001 RAL-306_125b 3316 chr3R 31042065 31042129 chr3R 31042201 31042266 20 133 12.5 10.0 11.2 1.6 201 chr3R 31042065 exon CanA1 + chr3R 31042166 intron CanA1 + chr3R 31042266 intron CanA1 + chr3R_20_31040001 chr3R_31040001 RAL-306_125b 3317 chr3R 31042958 31042973 chr3R 31043080 31043100 8 125 12.0 8.0 10.0 0.7 142 chr3R 31042958 intron CanA1 + chr3R 31043029 intron CanA1 + chr3R 31043100 intron CanA1 + chr3R_8_31040001 chr3R_31040001 RAL-306_125b 3318 chr3R 31042977 31043012 chr3R 31043074 31043139 8 120 9.5 8.5 9.0 0.8 162 chr3R 31042977 intron CanA1 + chr3R 31043058 intron CanA1 + chr3R 31043139 exon CanA1 + chr3R_8_31040001 chr3R_31040001 RAL-306_125b 3319 chr3R 31074185 31074234 chr3R 31081841 31081899 springer 13 7661 9.5 4.0 6.8 1.7 7714 chr3R 31074185 intron Sox100B + chr3R 31078042 intron Sox100B + chr3R 31081899 exon Sox100B + chr3R_13_31075001 chr3R_31075001 RAL-306_125b 3320 chr3R 31093286 31093333 chr3R 31093416 31093463 14 128 14.5 10.5 12.5 1.0 177 chr3R 31093286 intron CG11317 - chr3R 31093374 intron CG11317 - chr3R 31093463 intron CG11317 - chr3R_14_31090001 chr3R_31090001 RAL-306_125b 3321 chr3R 31093340 31093357 chr3R 31093412 31093466 5 104 7.0 10.5 8.8 0.5 126 chr3R 31093340 intron CG11317 - chr3R 31093403 intron CG11317 - chr3R 31093466 intron CG11317 - chr3R_5_31090001 chr3R_31090001 RAL-306_125b 3322 chr3R 31156296 31156304 chr3R 31156476 31156484 5 180 6.0 9.0 7.5 0.6 188 chr3R 31156296 intron Gycbeta100B + chr3R 31156390 intron Gycbeta100B + chr3R 31156484 intron Gycbeta100B + chr3R_5_31155001 chr3R_31155001 RAL-306_125b 3323 chr3R 31279331 31279395 chr3R 31285572 31285636 diver 23 6239 14.5 9.5 12.0 1.8 6305 chr3R 31279331 intergenic not near genes chr3R 31282484 intergenic not near genes chr3R 31285636 intergenic not near genes chr3R_23_31280001 chr3R_31280001 RAL-306_125b 3324 chr3R 31386569 31386636 chr3R 31386978 31387045 20 409 9.0 9.5 9.2 2.0 476 chr3R 31386569 intron CG1607 + chr3R 31386807 intron CG1607 + chr3R 31387045 intron CG1607 + chr3R_20_31385001 chr3R_31385001 RAL-306_125b 3325 chr3R 31435316 31435391 chr3R 31435518 31435593 35 199 5.5 8.0 6.8 4.5 277 chr3R 31435316 intron Gprk2 + chr3R 31435454 intron Gprk2 + chr3R 31435593 intron Gprk2 + chr3R_35_31435001 chr3R_31435001 RAL-306_125b 3326 chr3R 31437601 31437634 chr3R 31437830 31437878 7 241 6.5 10.5 8.5 0.7 277 chr3R 31437601 intron Gprk2 + chr3R 31437740 intron Gprk2 + chr3R 31437878 intron Gprk2 + chr3R_7_31435001 chr3R_31435001 RAL-306_125b 3327 chr3R 31446035 31446102 chr3R 31446175 31446245 20 138 8.0 5.5 6.8 2.6 210 chr3R 31446035 intron Gprk2 + chr3R 31446140 intron Gprk2 + chr3R 31446245 intron Gprk2 + chr3R_20_31445001 chr3R_31445001 RAL-306_125b 3328 chr3R 31482331 31482383 chr3R 31482460 31482512 16 127 6.0 3.0 4.5 2.9 181 chr3R 31482331 intergenic not near genes chr3R 31482422 intergenic not near genes chr3R 31482512 intergenic not near genes chr3R_16_31480001 chr3R_31480001 RAL-306_125b 3329 chr3R 31530792 31530830 chr3R 31531164 31531182 5 365 7.0 8.0 7.5 0.6 390 chr3R 31530792 intergenic not near genes chr3R 31530987 intergenic not near genes chr3R 31531182 intergenic not near genes chr3R_5_31530001 chr3R_31530001 RAL-306_125b 3330 chr3R 31610076 31610137 chr3R 31610212 31610273 21 135 8.0 9.0 8.5 2.2 197 chr3R 31610076 intron CycG - chr3R 31610174 intron CycG - chr3R 31610273 intron CycG - chr3R_21_31610001 chr3R_31610001 RAL-306_125b 3331 chr3R 31615117 31615189 chr3R 31615343 31615415 23 223 8.5 9.5 9.0 2.3 298 chr3R 31615117 3` UTR Med + chr3R 31615266 3` UTR Med + chr3R 31615415 exon CG11539 - chr3R_23_31615001 chr3R_31615001 RAL-306_125b 3332 chr3R 31691494 31691561 chr3R 31696304 31696362 Doc 15 4813 6.5 8.5 7.5 1.8 4868 chr3R 31691494 intergenic not near genes chr3R 31693928 intergenic not near genes chr3R 31696362 intergenic not near genes chr3R_15_31690001 chr3R_31690001 RAL-306_125b 3333 chr3R 31718519 31718550 chr3R 31718616 31718670 8 109 13.5 10.5 12.0 0.6 151 chr3R 31718519 intron ttk + chr3R 31718594 intron ttk + chr3R 31718670 intron ttk + chr3R_8_31715001 chr3R_31715001 RAL-306_125b 3334 chr3R 31820522 31820577 chr3R 31820646 31820690 23 123 5.5 11.5 8.5 2.4 168 chr3R 31820522 intron RhoGAP100F + chr3R 31820606 intron RhoGAP100F + chr3R 31820690 intron RhoGAP100F + chr3R_23_31820001 chr3R_31820001 RAL-306_125b 3335 chr3R 31858125 31858200 chr3R 31858275 31858353 14 150 0.0 5.0 2.5 4.0 228 chr3R 31858125 intron heph - chr3R 31858239 intron heph - chr3R 31858353 intron heph - chr3R_14_31855001 chr3R_31855001 RAL-306_125b 3336 chr3R 31876150 31876209 chr3R 31876260 31876320 13 104 6.0 3.0 4.5 2.4 170 chr3R 31876150 intron heph - chr3R 31876235 intron heph - chr3R 31876320 intron heph - chr3R_13_31875001 chr3R_31875001 RAL-306_125b 3337 chr3R 31961293 31961365 chr3R 31961426 31961498 27 127 8.0 9.5 8.8 2.8 205 chr3R 31961293 intron heph - chr3R 31961396 intron heph - chr3R 31961498 intron heph - chr3R_27_31960001 chr3R_31960001 RAL-306_125b 3338 chr3R 31962056 31962071 chr3R 31962390 31962420 8 348 7.5 0.0 3.8 1.7 364 chr3R 31962056 intron heph - chr3R 31962238 intron heph - chr3R 31962420 intron heph - chr3R_8_31960001 chr3R_31960001 RAL-306_125b 3339 chr3R 31967439 31967518 chr3R 31967959 31967983 INE-1 15 513 3.5 10.0 6.8 1.9 544 chr3R 31967439 intron heph - chr3R 31967711 intron heph - chr3R 31967983 intron heph - chr3R_15_31965001 chr3R_31965001 RAL-306_125b 3340 chr3R 31976544 31976561 chr3R 31976870 31976892 7 330 0.0 10.5 5.2 1.1 348 chr3R 31976544 intron heph - chr3R 31976718 intron heph - chr3R 31976892 intron heph - chr3R_7_31975001 chr3R_31975001 RAL-306_125b 3341 chr3R 31997945 31997971 chr3R 32005465 32005491 blood 6 7520 18.5 7.0 12.8 0.4 7546 chr3R 31997945 intron heph - chr3R 32001718 intron heph - chr3R 32005491 intron heph - chr3R_6_32000001 chr3R_32000001 RAL-306_125b 3342 chr3R 31997975 31998020 chr3R 32005460 32005540 blood 19 7518 7.0 6.5 6.8 2.4 7565 chr3R 31997975 intron heph - chr3R 32001758 intron heph - chr3R 32005540 intron heph - chr3R_19_32000001 chr3R_32000001 RAL-306_125b 3343 chr3R 32014804 32014874 chr3R 32015128 32015171 17 320 2.5 5.0 3.8 3.5 367 chr3R 32014804 5` UTR heph - chr3R 32014988 5` UTR heph - chr3R 32015171 5` UTR heph - chr3R_17_32010001 chr3R_32010001 RAL-306_125b 3344 chr4 76454 76512 chr4 81947 82005 I-element 16 5491 11.5 8.0 9.8 1.5 5551 chr4 76454 intron pan + chr4 79230 intron pan + chr4 82005 intron pan + chr4_16_75001 chr4_75001 RAL-306_125b 3345 chr4 257362 257431 chr4 257582 257651 19 218 9.5 9.0 9.2 1.9 289 chr4 257362 exon RhoGAP102A + chr4 257506 intron RhoGAP102A + chr4 257651 intron RhoGAP102A + chr4_19_255001 chr4_255001 RAL-306_125b 3346 chr4 280755 280786 chr4 281435 281466 14 679 24.0 10.5 17.2 0.8 711 chr4 280755 intron Syt7 - chr4 281110 intron Syt7 - chr4 281466 intron Syt7 - chr4_14_280001 chr4_280001 RAL-306_125b 3347 chr4 314464 314531 chr4 314592 314659 31 128 4.0 6.5 5.2 5.0 195 chr4 314464 intergenic Zip102B -,CG32850 + chr4 314562 intergenic CG32850 +,Zip102B - chr4 314659 intergenic CG32850 + chr4_31_310001 chr4_310001 RAL-306_125b 3348 chr4 319949 320006 chr4 328175 328232 Stalker2 17 8223 10.0 8.0 9.0 1.7 8283 chr4 319949 3` UTR CG32850 + chr4 324090 intron CG32850 + chr4 328232 3` UTR,3` UTR CG32850 +,PMCA - chr4_17_320001 chr4_320001 RAL-306_125b 3349 chr4 368652 368692 chr4 368834 368874 5 182 14.5 9.0 11.8 0.4 222 chr4 368652 intron Hcf + chr4 368763 intron Hcf + chr4 368874 intron Hcf + chr4_5_365001 chr4_365001 RAL-306_125b 3350 chr4 617662 617725 chr4 618040 618102 4 378 11.0 31.0 21.0 0.2 440 chr4 617662 intron Eph + chr4 617882 intron Eph + chr4 618102 intron Eph + chr4_4_615001 chr4_615001 RAL-306_125b 3351 chr4 671571 671631 chr4 680204 680223 Tirant 23 8630 3.0 9.5 6.2 3.2 8652 chr4 671571 intron CG11360 + chr4 675897 intron CG11360 + chr4 680223 intron CG11360 + chr4_23_675001 chr4_675001 RAL-306_125b 3352 chr4 706628 706653 chr4 706811 706836 7 184 42.5 42.0 42.2 0.2 208 chr4 706628 intron ey + chr4 706732 intron ey + chr4 706836 intron ey + chr4_7_705001 chr4_705001 RAL-306_125b 3353 chr4 726617 726686 chr4 726757 726826 24 138 6.5 5.0 5.8 3.5 209 chr4 726617 intron bt + chr4 726722 intron bt + chr4 726826 intron bt + chr4_24_725001 chr4_725001 RAL-306_125b 3354 chr4 959585 959594 chr4 959814 959823 4 229 12.5 6.5 9.5 0.4 238 chr4 959585 intergenic CR44030 +,CR45201 - chr4 959704 5` UTR CR44030 + chr4 959823 5` UTR CR44030 + chr4_4_955001 chr4_955001 RAL-306_125b 3355 chr4 959596 959647 chr4 959810 959876 12 224 4.5 6.5 5.5 1.8 280 chr4 959596 intergenic CR44030 +,CR45201 - chr4 959736 5` UTR CR44030 + chr4 959876 5` UTR CR44030 + chr4_12_955001 chr4_955001 RAL-306_125b 3356 chr4 972451 972522 chr4 972583 972654 30 131 10.0 10.5 10.2 2.7 203 chr4 972451 intron fuss - chr4 972552 intron fuss - chr4 972654 intron fuss - chr4_30_970001 chr4_970001 RAL-306_125b 3357 chrX 295810 295872 chrX 303480 303542 412 21 7668 7.0 5.5 6.2 2.9 7732 chrX 295810 intron CG3777 + chrX 299676 intron CG3777 + chrX 303542 intron CG3777 + chrX_21_295001 chrX_295001 RAL-306_125b 3358 chrX 318435 318452 chrX 323571 323588 flea 7 5136 14.0 9.0 11.5 0.6 5153 chrX 318435 intron,intron CG3777 +,CG32816 - chrX 321012 intron,intron CG3777 +,CG32816 - chrX 323588 intron,intron CG3777 +,CG32816 - chrX_7_320001 chrX_320001 RAL-306_125b 3359 chrX 318454 318485 chrX 323564 323621 flea 13 5129 8.5 7.5 8.0 1.4 5167 chrX 318454 intron,intron CG3777 +,CG32816 - chrX 321038 intron,intron CG3777 +,CG32816 - chrX 323621 intron,intron CG3777 +,CG32816 - chrX_13_320001 chrX_320001 RAL-306_125b 3360 chrX 342455 342523 chrX 342639 342707 16 184 9.5 4.5 7.0 2.0 252 chrX 342455 intron,intron CG3777 +,CG32816 - chrX 342581 intron,intron CG3777 +,CG32816 - chrX 342707 intron,intron CG3777 +,CG32816 - chrX_16_340001 chrX_340001 RAL-306_125b 3361 chrX 428384 428429 chrX 434619 434664 3S18 13 6234 11.0 9.0 10.0 1.2 6280 chrX 428384 intron CG32816 - chrX 431524 intron CG32816 - chrX 434664 intron CG32816 - chrX_13_430001 chrX_430001 RAL-306_125b 3362 chrX 551392 551450 chrX 559004 559062 412 12 7609 4.0 6.5 5.2 1.9 7670 chrX 551392 intron Appl + chrX 555227 intron Appl + chrX 559062 intron Appl + chrX_12_555001 chrX_555001 RAL-306_125b 3363 chrX 609848 609916 chrX 609990 610008 14 134 4.0 8.5 6.2 1.9 160 chrX 609848 intron CG13366 - chrX 609928 intron CG13366 - chrX 610008 intron CG13366 - chrX_14_605001 chrX_605001 RAL-306_125b 3364 chrX 802244 802321 chrX 802371 802403 15 119 6.5 6.0 6.2 2.1 159 chrX 802244 exon CG13359 - chrX 802324 exon CG13359 - chrX 802403 exon CG13359 - chrX_15_800001 chrX_800001 RAL-306_125b 3365 chrX 812230 812248 chrX 817911 817929 297 4 5681 17.5 5.0 11.2 0.3 5699 chrX 812230 intron CG43867 - chrX 815080 intron CG43867 - chrX 817929 intron CG43867 - chrX_4_815001 chrX_815001 RAL-306_125b 3366 chrX 812251 812289 chrX 817902 817944 297 16 5674 8.0 4.0 6.0 2.3 5693 chrX 812251 intron CG43867 - chrX 815098 intron CG43867 - chrX 817944 intron CG43867 - chrX_16_815001 chrX_815001 RAL-306_125b 3367 chrX 827559 827627 chrX 835401 835448 roo 10 7839 9.0 7.0 8.0 1.1 7889 chrX 827559 intron CG43867 - chrX 831504 intron CG43867 - chrX 835448 intron CG43867 - chrX_10_830001 chrX_830001 RAL-306_125b 3368 chrX 906660 906702 chrX 908499 908541 S-element 7 1837 9.5 4.5 7.0 0.9 1881 chrX 906660 intron CG43867 - chrX 907600 intron CG43867 - chrX 908541 intron CG43867 - chrX_7_905001 chrX_905001 RAL-306_125b 3369 chrX 906710 906727 chrX 908498 908566 S-element 6 1827 6.5 4.5 5.5 0.9 1856 chrX 906710 intron CG43867 - chrX 907638 intron CG43867 - chrX 908566 intron CG43867 - chrX_6_905001 chrX_905001 RAL-306_125b 3370 chrX 1051034 1051076 chrX 1051161 1051204 17 126 12.0 9.0 10.5 1.5 170 chrX 1051034 intron CR44779 + chrX 1051119 intron CR44779 + chrX 1051204 intron CR44779 + chrX_17_1050001 chrX_1050001 RAL-306_125b 3371 chrX 1053118 1053120 chrX 16983076 16983077 4 15929957 9.5 19.0 14.2 0.3 15929959 chrX 1053118 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-306_125b 3372 chrX 1063717 1063742 chrX 1072560 1072583 roo 9 8839 15.0 6.0 10.5 0.8 8866 chrX 1063717 intron CR44779 + chrX 1068150 intron CR44779 + chrX 1072583 intron CR44779 + chrX_9_1065001 chrX_1065001 RAL-306_125b 3373 chrX 1191932 1191972 chrX 1192030 1192098 9 108 5.0 7.0 6.0 1.3 166 chrX 1191932 intron CG11380 + chrX 1192015 intron CG11380 + chrX 1192098 intron CG11380 + chrX_9_1190001 chrX_1190001 RAL-306_125b 3374 chrX 1253686 1253762 chrX 1253818 1253894 21 129 4.5 5.0 4.8 3.6 208 chrX 1253686 intron Atf3 - chrX 1253790 intron Atf3 - chrX 1253894 intron Atf3 - chrX_21_1250001 chrX_1250001 RAL-306_125b 3375 chrX 1277192 1277206 chrX 1277410 1277425 4 219 8.0 6.0 7.0 0.5 233 chrX 1277192 intergenic not near genes chrX 1277308 intergenic not near genes chrX 1277425 intergenic not near genes chrX_4_1275001 chrX_1275001 RAL-306_125b 3376 chrX 1357749 1357768 chrX 1367969 1367988 Doc 7 10218 6.5 8.0 7.2 0.9 10239 chrX 1357749 intergenic png - chrX 1362868 intergenic not near genes chrX 1367988 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-306_125b 3377 chrX 1357775 1357791 chrX 1367950 1368011 Doc 5 10211 3.5 7.0 5.2 0.8 10236 chrX 1357775 intergenic png - chrX 1362893 intergenic not near genes chrX 1368011 intergenic not near genes chrX_5_1360001 chrX_1360001 RAL-306_125b 3378 chrX 1386978 1387030 chrX 1387106 1387142 9 123 6.0 4.5 5.2 1.5 164 chrX 1386978 intron CG32813 + chrX 1387060 intron CG32813 + chrX 1387142 intron CG32813 + chrX_9_1385001 chrX_1385001 RAL-306_125b 3379 chrX 1418826 1418874 chrX 1418989 1419028 17 172 6.5 1.5 4.0 3.4 202 chrX 1418826 intron futsch + chrX 1418927 intron futsch + chrX 1419028 intron futsch + chrX_17_1415001 chrX_1415001 RAL-306_125b 3380 chrX 1423600 1423671 chrX 1423748 1423819 14 136 3.0 2.0 2.5 4.0 219 chrX 1423600 intron futsch + chrX 1423710 intron futsch + chrX 1423819 intron futsch + chrX_14_1420001 chrX_1420001 RAL-306_125b 3381 chrX 1481394 1481413 chrX 1481537 1481556 6 143 12.0 10.0 11.0 0.5 162 chrX 1481394 3` UTR rush + chrX 1481475 intergenic rush +,sta - chrX 1481556 intergenic rush +,sta - chrX_6_1480001 chrX_1480001 RAL-306_125b 3382 chrX 1518002 1518061 chrX 1523454 1523513 jockey 18 5451 6.5 8.0 7.2 2.2 5511 chrX 1518002 intergenic inc + chrX 1520758 intergenic not near genes chrX 1523513 intergenic not near genes chrX_18_1520001 chrX_1520001 RAL-306_125b 3383 chrX 1930492 1930561 chrX 1938113 1938181 opus 14 7621 6.5 9.0 7.8 1.6 7689 chrX 1930492 3` UTR CG11596 + chrX 1934336 intergenic not near genes chrX 1938181 3` UTR CG3857 - chrX_14_1930001 chrX_1930001 RAL-306_125b 3384 chrX 1954841 1954914 chrX 1962831 1962904 Stalker2 10 7983 4.0 3.0 3.5 2.2 8063 chrX 1954841 intron Hr4 + chrX 1958872 intron Hr4 + chrX 1962904 intron Hr4 + chrX_10_1955001 chrX_1955001 RAL-306_125b 3385 chrX 1974226 1974264 chrX 1974346 1974375 12 134 12.5 9.0 10.8 1.0 149 chrX 1974226 intron Hr4 + chrX 1974300 intron Hr4 + chrX 1974375 intron Hr4 + chrX_12_1970001 chrX_1970001 RAL-306_125b 3386 chrX 2399801 2399860 chrX 2408204 2408251 roo 5 8392 3.5 2.0 2.8 1.3 8450 chrX 2399801 intergenic not near genes chrX 2404026 intergenic not near genes chrX 2408251 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-306_125b 3387 chrX 2578772 2578839 chrX 2578910 2578981 20 137 1.0 5.5 3.2 4.8 209 chrX 2578772 intergenic Pdfr +,Vha36-3 - chrX 2578876 intergenic Vha36-3 -,Pdfr + chrX 2578981 intergenic Vha36-3 -,Pdfr + chrX_20_2575001 chrX_2575001 RAL-306_125b 3388 chrX 2610341 2610412 chrX 2617508 2617564 HMS-Beagle 15 7164 6.0 9.5 7.8 1.7 7223 chrX 2610341 intergenic CG8636 - chrX 2613952 intergenic not near genes chrX 2617564 intergenic Tsp3A - chrX_15_2610001 chrX_2610001 RAL-306_125b 3389 chrX 2664349 2664409 chrX 2665545 2665605 1360 20 1194 8.0 6.5 7.2 2.4 1256 chrX 2664349 intron sgg + chrX 2664977 intron sgg + chrX 2665605 intron sgg + chrX_20_2660001 chrX_2660001 RAL-306_125b 3390 chrX 2823749 2823776 chrX 2832347 2832374 roo 12 8597 10.0 5.5 7.8 1.4 8625 chrX 2823749 intron kirre + chrX 2828062 intron kirre + chrX 2832374 intron kirre + chrX_12_2825001 chrX_2825001 RAL-306_125b 3391 chrX 2844858 2844923 chrX 2852318 2852383 mdg1 18 7459 4.5 4.0 4.2 3.5 7525 chrX 2844858 intron kirre + chrX 2848620 intron kirre + chrX 2852383 intron kirre + chrX_18_2845001 chrX_2845001 RAL-306_125b 3392 chrX 2967157 2967209 chrX 2967316 2967369 16 159 3.5 6.5 5.0 2.7 212 chrX 2967157 intron,intron kirre +,rst - chrX 2967263 intron,intron kirre +,rst - chrX 2967369 intron,intron kirre +,rst - chrX_16_2965001 chrX_2965001 RAL-306_125b 3393 chrX 3057989 3058042 chrX 3058273 3058333 pogo 16 289 4.5 6.5 5.5 2.5 344 chrX 3057989 intron kirre + chrX 3058161 intron kirre + chrX 3058333 intron kirre + chrX_16_3055001 chrX_3055001 RAL-306_125b 3394 chrX 3075581 3075618 chrX 3080942 3080974 Transpac 7 5360 12.0 0.0 6.0 1.0 5393 chrX 3075581 intron kirre + chrX 3078278 intron kirre + chrX 3080974 intron kirre + chrX_7_3075001 chrX_3075001 RAL-306_125b 3395 chrX 3082547 3082596 chrX 3082674 3082677 11 113 5.0 4.0 4.5 2.0 130 chrX 3082547 intron kirre + chrX 3082612 intron kirre + chrX 3082677 intron kirre + chrX_11_3080001 chrX_3080001 RAL-306_125b 3396 chrX 3103453 3103474 chrX 3103589 3103610 5 136 9.5 3.0 6.2 0.7 157 chrX 3103453 intron kirre + chrX 3103532 intron kirre + chrX 3103610 intron kirre + chrX_5_3100001 chrX_3100001 RAL-306_125b 3397 chrX 3116684 3116754 chrX 3117381 3117451 12 695 4.5 3.5 4.0 2.4 767 chrX 3116684 intron kirre + chrX 3117068 intron kirre + chrX 3117451 intron kirre + chrX_12_3115001 chrX_3115001 RAL-306_125b 3398 chrX 3120078 3120089 chrX 3120181 3120211 4 120 0.0 9.0 4.5 0.7 133 chrX 3120078 intron kirre + chrX 3120144 intron kirre + chrX 3120211 intron kirre + chrX_4_3120001 chrX_3120001 RAL-306_125b 3399 chrX 3120092 3120097 chrX 3120170 3120199 4 105 1.5 7.5 4.5 0.7 107 chrX 3120092 intron kirre + chrX 3120146 intron kirre + chrX 3120199 intron kirre + chrX_4_3120001 chrX_3120001 RAL-306_125b 3400 chrX 3197727 3197744 chrX 3197890 3197909 4 164 11.0 4.0 7.5 0.5 182 chrX 3197727 intron dnc + chrX 3197818 intron dnc + chrX 3197909 intron dnc + chrX_4_3195001 chrX_3195001 RAL-306_125b 3401 chrX 3197749 3197794 chrX 3197887 3197959 14 159 4.5 3.5 4.0 2.8 210 chrX 3197749 intron dnc + chrX 3197854 intron dnc + chrX 3197959 intron dnc + chrX_14_3195001 chrX_3195001 RAL-306_125b 3402 chrX 3206439 3206454 chrX 3206568 3206583 8 129 7.5 9.0 8.2 0.9 144 chrX 3206439 intron dnc + chrX 3206511 intron dnc + chrX 3206583 intron dnc + chrX_8_3205001 chrX_3205001 RAL-306_125b 3403 chrX 3243617 3243646 chrX 3243754 3243786 16 140 6.0 6.5 6.2 2.2 169 chrX 3243617 intron dnc + chrX 3243702 intron dnc + chrX 3243786 intron dnc + chrX_16_3240001 chrX_3240001 RAL-306_125b 3404 chrX 3295663 3295714 chrX 3295810 3295859 11 145 2.0 9.0 5.5 1.7 196 chrX 3295663 intron dnc + chrX 3295761 intron dnc + chrX 3295859 intron dnc + chrX_11_3295001 chrX_3295001 RAL-306_125b 3405 chrX 3306314 3306374 chrX 3306446 3306506 18 131 8.0 9.0 8.5 1.9 192 chrX 3306314 intron dnc + chrX 3306410 intron dnc + chrX 3306506 intron dnc + chrX_18_3305001 chrX_3305001 RAL-306_125b 3406 chrX 3352726 3352749 chrX 3352865 3352882 5 138 8.0 0.0 4.0 1.0 156 chrX 3352726 intergenic not near genes chrX 3352804 intergenic not near genes chrX 3352882 intergenic not near genes chrX_5_3350001 chrX_3350001 RAL-306_125b 3407 chrX 3415012 3415038 chrX 3421224 3421273 3S18 12 6229 1.5 11.0 6.2 1.7 6261 chrX 3415012 intron,intron CR44999 +,CG12535 - chrX 3418142 intron,intron CR44999 +,CG12535 - chrX 3421273 intron,intron CR44999 +,CG12535 - chrX_12_3415001 chrX_3415001 RAL-306_125b 3408 chrX 3459938 3460002 chrX 3460073 3460137 20 135 7.5 8.0 7.8 2.3 199 chrX 3459938 intron,5` UTR CR44999 +,CG16782 - chrX 3460038 intron,5` UTR CR44999 +,CG16782 - chrX 3460137 intron,5` UTR CR44999 +,CG16782 - chrX_20_3460001 chrX_3460001 RAL-306_125b 3409 chrX 3493047 3493123 chrX 3502256 3502323 roo 15 9205 2.5 2.5 2.5 4.3 9276 chrX 3493047 intron,exon CR44999 +,Gas8 - chrX 3497685 intron,intron CR44999 +,Gas8 - chrX 3502323 intron,intron CR44999 +,Gas8 - chrX_15_3495001 chrX_3495001 RAL-306_125b 3410 chrX 3513716 3513788 chrX 3513849 3513921 20 132 3.0 4.5 3.8 4.2 205 chrX 3513716 intron,intron CR44999 +,CG32791 - chrX 3513818 intron,intron CR44999 +,CG32791 - chrX 3513921 intron,intron CR44999 +,CG32791 - chrX_20_3510001 chrX_3510001 RAL-306_125b 3411 chrX 3597510 3597547 chrX 3619728 3619765 roo 10 22218 8.0 5.5 6.8 1.3 22255 chrX 3597510 intron AstA-R1 + chrX 3608638 intron AstA-R1 + chrX 3619765 intron AstA-R1 + chrX_10_3605001 chrX_3605001 RAL-306_125b 3412 chrX 3597553 3597578 chrX 3619718 3619745 roo 6 22201 4.5 5.0 4.8 1.0 22192 chrX 3597553 intron AstA-R1 + chrX 3608649 intron AstA-R1 + chrX 3619745 intron AstA-R1 + chrX_6_3605001 chrX_3605001 RAL-306_125b 3413 chrX 3630500 3630572 chrX 3630626 3630698 24 125 4.5 2.0 3.2 5.7 198 chrX 3630500 intron AstA-R1 + chrX 3630599 intron AstA-R1 + chrX 3630698 intron AstA-R1 + chrX_24_3630001 chrX_3630001 RAL-306_125b 3414 chrX 3657371 3657379 chrX 3657494 3657504 7 128 13.5 7.0 10.2 0.6 133 chrX 3657371 intron AstA-R1 + chrX 3657438 intron AstA-R1 + chrX 3657504 intron AstA-R1 + chrX_7_3655001 chrX_3655001 RAL-306_125b 3415 chrX 3657383 3657445 chrX 3657493 3657570 19 125 7.5 7.0 7.2 2.3 187 chrX 3657383 intron AstA-R1 + chrX 3657476 intron AstA-R1 + chrX 3657570 intron AstA-R1 + chrX_19_3655001 chrX_3655001 RAL-306_125b 3416 chrX 3713075 3713128 chrX 3713234 3713287 15 156 8.5 7.5 8.0 1.7 212 chrX 3713075 intron Rala - chrX 3713181 intron Rala - chrX 3713287 intron Rala - chrX_15_3710001 chrX_3710001 RAL-306_125b 3417 chrX 3726723 3726750 chrX 3730170 3730182 NOF 7 3445 2.5 0.5 1.5 2.8 3459 chrX 3726723 intron tlk + chrX 3728452 intron tlk + chrX 3730182 intron tlk + chrX_7_3725001 chrX_3725001 RAL-306_125b 3418 chrX 3842280 3842343 chrX 3842571 3842634 pogo 15 291 5.5 9.5 7.5 1.8 354 chrX 3842280 intron ec + chrX 3842457 intron ec + chrX 3842634 intron ec + chrX_15_3840001 chrX_3840001 RAL-306_125b 3419 chrX 3862783 3862844 chrX 3862916 3862978 14 132 5.5 4.5 5.0 2.3 195 chrX 3862783 intergenic yin - chrX 3862880 intergenic yin - chrX 3862978 3` UTR yin - chrX_14_3860001 chrX_3860001 RAL-306_125b 3420 chrX 3922085 3922154 chrX 3922406 3922428 8 318 1.5 6.0 3.8 1.7 343 chrX 3922085 intron CG42541 - chrX 3922256 intron CG42541 - chrX 3922428 intron CG42541 - chrX_8_3920001 chrX_3920001 RAL-306_125b 3421 chrX 3929999 3930044 chrX 3930130 3930175 4 131 24.0 20.5 22.2 0.2 176 chrX 3929999 5` UTR CG42541 - chrX 3930087 5` UTR CG42541 - chrX 3930175 5` UTR CG42541 - chrX_4_3930001 chrX_3930001 RAL-306_125b 3422 chrX 3950770 3950787 chrX 3950888 3950917 12 129 15.0 10.0 12.5 0.9 147 chrX 3950770 intron Vap-33A + chrX 3950844 intron Vap-33A + chrX 3950917 intron Vap-33A + chrX_12_3950001 chrX_3950001 RAL-306_125b 3423 chrX 3950789 3950827 chrX 3950884 3950957 17 122 10.0 9.0 9.5 1.6 168 chrX 3950789 intron Vap-33A + chrX 3950873 intron Vap-33A + chrX 3950957 intron Vap-33A + chrX_17_3950001 chrX_3950001 RAL-306_125b 3424 chrX 3986831 3986839 chrX 3994513 3994519 412 4 7682 12.5 8.0 10.2 0.4 7688 chrX 3986831 intergenic not near genes chrX 3990675 intergenic not near genes chrX 3994519 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-306_125b 3425 chrX 3986847 3986890 chrX 3994509 3994573 412 20 7680 4.0 8.0 6.0 2.9 7726 chrX 3986847 intergenic not near genes chrX 3990710 intergenic not near genes chrX 3994573 intergenic not near genes chrX_20_3990001 chrX_3990001 RAL-306_125b 3426 chrX 3994765 3994814 chrX 3994968 3995017 13 199 4.5 4.5 4.5 2.4 252 chrX 3994765 intergenic not near genes chrX 3994891 intergenic not near genes chrX 3995017 intergenic not near genes chrX_13_3990001 chrX_3990001 RAL-306_125b 3427 chrX 4029494 4029554 chrX 4029734 4029794 12 236 6.0 7.5 6.8 1.5 300 chrX 4029494 intergenic not near genes chrX 4029644 intergenic not near genes chrX 4029794 intergenic not near genes chrX_12_4025001 chrX_4025001 RAL-306_125b 3428 chrX 4047432 4047489 chrX 4047595 4047652 9 161 7.5 7.5 7.5 1.1 220 chrX 4047432 intergenic CR45482 - chrX 4047542 intergenic CR45482 - chrX 4047652 3` UTR CR45482 - chrX_9_4045001 chrX_4045001 RAL-306_125b 3429 chrX 4048453 4048525 chrX 4048579 4048651 10 125 1.5 4.0 2.8 2.6 198 chrX 4048453 3` UTR CR45482 - chrX 4048552 3` UTR CR45482 - chrX 4048651 3` UTR CR45482 - chrX_10_4045001 chrX_4045001 RAL-306_125b 3430 chrX 4157855 4157922 chrX 4164958 4165025 297 22 7099 5.5 5.5 5.5 3.4 7170 chrX 4157855 intron Fas2 - chrX 4161440 intron Fas2 - chrX 4165025 intron Fas2 - chrX_22_4160001 chrX_4160001 RAL-306_125b 3431 chrX 4209886 4209908 chrX 4210026 4210048 8 140 0.0 7.0 3.5 1.8 162 chrX 4209886 intergenic not near genes chrX 4209967 intergenic not near genes chrX 4210048 intergenic not near genes chrX_8_4205001 chrX_4205001 RAL-306_125b 3432 chrX 4216301 4216337 chrX 4216430 4216466 7 128 5.5 8.5 7.0 0.9 165 chrX 4216301 intergenic not near genes chrX 4216384 intergenic CG15571 - chrX 4216466 intergenic CG15571 - chrX_7_4215001 chrX_4215001 RAL-306_125b 3433 chrX 4324367 4324414 chrX 4324494 4324515 11 125 5.5 3.0 4.2 2.1 148 chrX 4324367 intron norpA + chrX 4324441 intron norpA + chrX 4324515 intron norpA + chrX_11_4320001 chrX_4320001 RAL-306_125b 3434 chrX 4389377 4389380 chrX 12946234 12946235 7 8556856 1.0 28.0 14.5 0.5 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_7_8665001 chrX_8665001 RAL-306_125b 3435 chrX 4436459 4436495 chrX 4436592 4436628 10 131 5.5 10.0 7.8 1.1 169 chrX 4436459 intron,intron CR32773 -,bi + chrX 4436544 intron,intron CR32773 -,bi + chrX 4436628 intron,intron CR32773 -,bi + chrX_10_4435001 chrX_4435001 RAL-306_125b 3436 chrX 4515793 4515856 chrX 4515921 4515984 12 127 3.5 7.0 5.2 1.9 191 chrX 4515793 intron CR32773 - chrX 4515888 intron CR32773 - chrX 4515984 intron CR32773 - chrX_12_4515001 chrX_4515001 RAL-306_125b 3437 chrX 4700355 4700416 chrX 4700748 4700809 jockey 18 391 4.0 9.5 6.8 2.3 454 chrX 4700355 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700809 3` UTR ctp + chrX_18_4700001 chrX_4700001 RAL-306_125b 3438 chrX 4717330 4717374 chrX 4717901 4717945 7 564 4.0 6.5 5.2 1.1 615 chrX 4717330 intron Proc-R + chrX 4717638 intron Proc-R + chrX 4717945 intron Proc-R + chrX_7_4715001 chrX_4715001 RAL-306_125b 3439 chrX 4763220 4763283 chrX 4763753 4763821 Stalker4 15 537 6.0 5.5 5.8 2.2 601 chrX 4763220 intergenic not near genes chrX 4763520 intergenic not near genes chrX 4763821 intergenic not near genes chrX_15_4760001 chrX_4760001 RAL-306_125b 3440 chrX 4792353 4792395 chrX 4792836 4792878 jockey 9 482 4.0 7.0 5.5 1.4 525 chrX 4792353 intergenic not near genes chrX 4792616 intergenic not near genes chrX 4792878 intergenic not near genes chrX_9_4790001 chrX_4790001 RAL-306_125b 3441 chrX 4827933 4827995 chrX 4835339 4835411 Stalker4 8 7401 6.5 7.5 7.0 1.0 7478 chrX 4827933 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835411 intergenic not near genes chrX_8_4830001 chrX_4830001 RAL-306_125b 3442 chrX 4859837 4859902 chrX 4859996 4860061 20 156 5.5 4.5 5.0 3.3 224 chrX 4859837 intron CG42594 + chrX 4859949 intron CG42594 + chrX 4860061 intron CG42594 + chrX_20_4855001 chrX_4855001 RAL-306_125b 3443 chrX 4902610 4902665 chrX 4902741 4902796 6 131 3.0 5.0 4.0 1.2 186 chrX 4902610 intron CG42594 + chrX 4902703 intron CG42594 + chrX 4902796 intron CG42594 + chrX_6_4900001 chrX_4900001 RAL-306_125b 3444 chrX 4931306 4931373 chrX 4931450 4931517 23 144 62.5 63.5 63.0 0.4 211 chrX 4931306 intron CG44774 - chrX 4931412 intron CG44774 - chrX 4931517 intron CG44774 - chrX_23_4930001 chrX_4930001 RAL-306_125b 3445 chrX 4990001 4990072 chrX 4997265 4997336 roo 19 7262 3.0 4.5 3.8 4.0 7335 chrX 4990001 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997336 intron CR44833 - chrX_19_4990001 chrX_4990001 RAL-306_125b 3446 chrX 5096250 5096299 chrX 5103844 5103907 springer 7 7610 3.0 8.0 5.5 1.1 7657 chrX 5096250 intron,intron CG15465 +,rg + chrX 5100078 intron,intron CG15465 +,rg + chrX 5103907 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 RAL-306_125b 3447 chrX 5120616 5120656 chrX 5120774 5120801 7 155 3.0 3.0 3.0 1.8 185 chrX 5120616 intron,intron CG15465 +,rg + chrX 5120708 intron,intron CG15465 +,rg + chrX 5120801 intron,intron CG15465 +,rg + chrX_7_5120001 chrX_5120001 RAL-306_125b 3448 chrX 5162209 5162258 chrX 5162472 5162485 14 258 9.0 5.5 7.2 1.7 276 chrX 5162209 intron,intron CG15465 +,rg + chrX 5162347 intron,intron CG15465 +,rg + chrX 5162485 intron,intron CG15465 +,rg + chrX_14_5160001 chrX_5160001 RAL-306_125b 3449 chrX 5223660 5223722 chrX 5223788 5223849 17 127 1.5 8.5 5.0 2.8 189 chrX 5223660 intron,intron CG15465 +,rg + chrX 5223754 intron,intron CG15465 +,rg + chrX 5223849 intron,intron CG15465 +,rg + chrX_17_5220001 chrX_5220001 RAL-306_125b 3450 chrX 5264003 5264072 chrX 5264143 5264212 24 140 6.0 4.5 5.2 3.9 209 chrX 5264003 intergenic not near genes chrX 5264108 intergenic not near genes chrX 5264212 intergenic not near genes chrX_24_5260001 chrX_5260001 RAL-306_125b 3451 chrX 5272781 5272851 chrX 5272908 5272979 20 134 2.5 5.0 3.8 4.2 198 chrX 5272781 intergenic not near genes chrX 5272880 intergenic not near genes chrX 5272979 intergenic not near genes chrX_20_5270001 chrX_5270001 RAL-306_125b 3452 chrX 5338661 5338723 chrX 5339963 5340026 jockey 7 1291 4.5 3.5 4.0 1.4 1365 chrX 5338661 intergenic not near genes chrX 5339344 intergenic not near genes chrX 5340026 intergenic SK + chrX_7_5335001 chrX_5335001 RAL-306_125b 3453 chrX 5345315 5345386 chrX 5345509 5345578 5 193 0.5 4.5 2.5 1.4 263 chrX 5345315 intron SK + chrX 5345446 intron SK + chrX 5345578 intron SK + chrX_5_5345001 chrX_5345001 RAL-306_125b 3454 chrX 5349236 5349303 chrX 5349363 5349430 21 126 4.5 5.0 4.8 3.6 194 chrX 5349236 intron SK + chrX 5349333 intron SK + chrX 5349430 intron SK + chrX_21_5345001 chrX_5345001 RAL-306_125b 3455 chrX 5350258 5350310 chrX 5350417 5350469 20 156 6.0 3.5 4.8 3.4 211 chrX 5350258 intron SK + chrX 5350364 intron SK + chrX 5350469 intron SK + chrX_20_5350001 chrX_5350001 RAL-306_125b 3456 chrX 5456551 5456606 chrX 5456717 5456772 18 166 8.5 9.0 8.8 1.8 221 chrX 5456551 intron SPR + chrX 5456662 intron SPR + chrX 5456772 intron SPR + chrX_18_5455001 chrX_5455001 RAL-306_125b 3457 chrX 5456610 5456613 chrX 5456710 5456779 4 150 8.5 8.5 8.5 0.4 169 chrX 5456610 intron SPR + chrX 5456694 intron SPR + chrX 5456779 intron SPR + chrX_4_5455001 chrX_5455001 RAL-306_125b 3458 chrX 5473541 5473616 chrX 5473667 5473742 21 120 7.5 6.5 7.0 2.6 201 chrX 5473541 intron SPR + chrX 5473642 intron SPR + chrX 5473742 intron SPR + chrX_21_5470001 chrX_5470001 RAL-306_125b 3459 chrX 5481073 5481092 chrX 5485083 5485102 I-element 8 4009 0.0 3.0 1.5 3.2 4029 chrX 5481073 intron SPR + chrX 5483088 intron SPR + chrX 5485102 intron SPR + chrX_8_5480001 chrX_5480001 RAL-306_125b 3460 chrX 5524805 5524851 chrX 5528713 5528738 412 11 3908 5.0 1.5 3.2 2.6 3933 chrX 5524805 intergenic snoRNA:Psi28S-3342 - chrX 5526772 intergenic not near genes chrX 5528738 intergenic Vsx2 - chrX_11_5525001 chrX_5525001 RAL-306_125b 3461 chrX 5727377 5727415 chrX 5732166 5732204 Doc 21 4787 3.0 6.5 4.8 3.6 4827 chrX 5727377 intron CG32758 - chrX 5729790 intron CG32758 - chrX 5732204 intron CG32758 - chrX_21_5725001 chrX_5725001 RAL-306_125b 3462 chrX 5792555 5792567 chrX 5792733 5792751 5 180 17.0 7.0 12.0 0.4 196 chrX 5792555 exon CG12239 + chrX 5792653 exon CG12239 + chrX 5792751 exon CG12239 + chrX_5_5790001 chrX_5790001 RAL-306_125b 3463 chrX 5798850 5798892 chrX 5799037 5799104 17 208 1.0 9.0 5.0 2.8 254 chrX 5798850 intergenic not near genes chrX 5798977 intergenic not near genes chrX 5799104 intergenic not near genes chrX_17_5795001 chrX_5795001 RAL-306_125b 3464 chrX 5883772 5883834 chrX 5884063 5884125 pogo 26 290 8.5 5.0 6.8 3.3 353 chrX 5883772 intron CR45668 - chrX 5883948 intron CR45668 - chrX 5884125 intron CR45668 - chrX_26_5880001 chrX_5880001 RAL-306_125b 3465 chrX 5884128 5884183 chrX 5884408 5884474 pogo 16 288 6.0 5.5 5.8 2.4 346 chrX 5884128 intron CR45668 - chrX 5884301 intron CR45668 - chrX 5884474 intron CR45668 - chrX_16_5880001 chrX_5880001 RAL-306_125b 3466 chrX 5966785 5966830 chrX 5966900 5966942 6 126 4.5 7.0 5.8 0.9 157 chrX 5966785 intron Grip + chrX 5966864 intron Grip + chrX 5966942 intron Grip + chrX_6_5965001 chrX_5965001 RAL-306_125b 3467 chrX 5989326 5989388 chrX 5989436 5989454 15 103 4.5 6.5 5.5 2.3 128 chrX 5989326 5` UTR CG5966 + chrX 5989390 5` UTR CG5966 + chrX 5989454 5` UTR CG5966 + chrX_15_5985001 chrX_5985001 RAL-306_125b 3468 chrX 6100449 6100524 chrX 6100622 6100697 13 171 3.0 3.5 3.2 3.1 248 chrX 6100449 intron Nep1 + chrX 6100573 intron Nep1 + chrX 6100697 intron Nep1 + chrX_13_6100001 chrX_6100001 RAL-306_125b 3469 chrX 6118659 6118720 chrX 6118785 6118852 21 131 5.0 5.5 5.2 3.4 193 chrX 6118659 intron Ca-alpha1T - chrX 6118756 intron Ca-alpha1T - chrX 6118852 intron Ca-alpha1T - chrX_21_6115001 chrX_6115001 RAL-306_125b 3470 chrX 6171556 6171601 chrX 6179023 6179084 Quasimodo 14 7481 9.0 7.5 8.2 1.5 7528 chrX 6171556 intron Ca-alpha1T - chrX 6175320 intron Ca-alpha1T - chrX 6179084 intron Ca-alpha1T - chrX_14_6175001 chrX_6175001 RAL-306_125b 3471 chrX 6197848 6197857 chrX 6201853 6201867 4 4009 7.0 28.0 17.5 0.2 4019 chrX 6197848 intron CG32751 - chrX 6199858 5` UTR CG43090 - chrX 6201867 exon vanin-like - chrX_4_6195001 chrX_6195001 RAL-306_125b 3472 chrX 6215318 6215368 chrX 6215451 6215470 22 130 0.5 6.0 3.2 5.2 152 chrX 6215318 intergenic not near genes chrX 6215394 intergenic not near genes chrX 6215470 intergenic not near genes chrX_22_6215001 chrX_6215001 RAL-306_125b 3473 chrX 6263259 6263264 chrX 6263543 6263562 8 295 3.5 15.5 9.5 0.8 303 chrX 6263259 intron schlank - chrX 6263410 intron schlank - chrX 6263562 intron schlank - chrX_8_6260001 chrX_6260001 RAL-306_125b 3474 chrX 6315402 6315448 chrX 6315590 6315647 12 193 10.0 8.5 9.2 1.2 245 chrX 6315402 intron CG15894 + chrX 6315524 intron CG15894 + chrX 6315647 intron CG15894 + chrX_12_6315001 chrX_6315001 RAL-306_125b 3475 chrX 6335218 6335237 chrX 6337727 6337797 Tirant 9 2551 0.5 9.5 5.0 1.5 2579 chrX 6335218 intergenic not near genes chrX 6336508 intergenic not near genes chrX 6337797 5` UTR CG3842 + chrX_9_6335001 chrX_6335001 RAL-306_125b 3476 chrX 6392829 6392888 chrX 6397644 6397703 Doc 22 4812 7.0 5.5 6.2 3.1 4874 chrX 6392829 intergenic not near genes chrX 6395266 intergenic not near genes chrX 6397703 intergenic not near genes chrX_22_6395001 chrX_6395001 RAL-306_125b 3477 chrX 6445260 6445327 chrX 6451068 6451135 297 7 5808 7.0 6.5 6.8 0.9 5875 chrX 6445260 intron CG42340 - chrX 6448198 intron CG42340 - chrX 6451135 intron CG42340 - chrX_7_6445001 chrX_6445001 RAL-306_125b 3478 chrX 6487936 6487982 chrX 6488063 6488114 12 128 9.5 6.0 7.8 1.4 178 chrX 6487936 intron CG42340 - chrX 6488025 intron CG42340 - chrX 6488114 intron CG42340 - chrX_12_6485001 chrX_6485001 RAL-306_125b 3479 chrX 6539880 6539946 chrX 6540022 6540098 10 148 3.5 4.0 3.8 2.1 218 chrX 6539880 intergenic not near genes chrX 6539989 intergenic not near genes chrX 6540098 intergenic not near genes chrX_10_6535001 chrX_6535001 RAL-306_125b 3480 chrX 6562775 6562839 chrX 6571307 6571346 Tirant 8 8525 7.0 6.0 6.5 1.1 8571 chrX 6562775 intron CG34417 + chrX 6567060 intron CG34417 + chrX 6571346 intron CG34417 + chrX_8_6565001 chrX_6565001 RAL-306_125b 3481 chrX 6591812 6591843 chrX 6591943 6591978 6 134 6.5 1.0 3.8 1.2 166 chrX 6591812 intron Pat1 + chrX 6591895 intron Pat1 + chrX 6591978 intron Pat1 + chrX_6_6590001 chrX_6590001 RAL-306_125b 3482 chrX 6592020 6592088 chrX 6592266 6592333 18 244 0.0 9.5 4.8 3.1 313 chrX 6592020 intron Pat1 + chrX 6592176 intron Pat1 + chrX 6592333 intron Pat1 + chrX_18_6590001 chrX_6590001 RAL-306_125b 3483 chrX 6605441 6605499 chrX 6608514 6608572 Burdock 7 3073 3.5 7.0 5.2 1.1 3131 chrX 6605441 intron pigs + chrX 6607006 intron pigs + chrX 6608572 intron pigs + chrX_7_6605001 chrX_6605001 RAL-306_125b 3484 chrX 6618417 6618474 chrX 6618545 6618602 11 128 8.0 7.5 7.8 1.2 185 chrX 6618417 intron pigs + chrX 6618510 intron pigs + chrX 6618602 intron pigs + chrX_11_6615001 chrX_6615001 RAL-306_125b 3485 chrX 6629736 6629778 chrX 6629873 6629915 8 137 10.0 6.5 8.2 0.9 179 chrX 6629736 intron pigs + chrX 6629826 intron pigs + chrX 6629915 intron pigs + chrX_8_6625001 chrX_6625001 RAL-306_125b 3486 chrX 6729595 6729664 chrX 6729976 6730044 19 378 4.5 4.0 4.2 3.7 449 chrX 6729595 intron CG3168 - chrX 6729820 intron CG3168 - chrX 6730044 intron CG3168 - chrX_19_6725001 chrX_6725001 RAL-306_125b 3487 chrX 6733432 6733663 chrX 6733571 6733798 8 137 14.5 13.0 13.8 0.5 366 chrX 6733432 intron,intron CG3168 -,CR43461 + chrX 6733615 intron,intron CG3168 -,CR43461 + chrX 6733798 intron,intron CG3168 -,CR43461 + chrX_8_6730001 chrX_6730001 RAL-306_125b 3488 chrX 6792047 6792079 chrX 6792188 6792220 13 138 6.0 7.0 6.5 1.7 173 chrX 6792047 intron C3G - chrX 6792134 intron C3G - chrX 6792220 intron C3G - chrX_13_6790001 chrX_6790001 RAL-306_125b 3489 chrX 6865750 6865789 chrX 6865874 6865917 6 131 9.0 6.0 7.5 0.7 167 chrX 6865750 intron CG14434 - chrX 6865834 intron CG14434 - chrX 6865917 intron CG14434 - chrX_6_6865001 chrX_6865001 RAL-306_125b 3490 chrX 6897281 6897294 chrX 6897631 6897644 6 350 0.0 5.0 2.5 1.7 363 chrX 6897281 intergenic not near genes chrX 6897462 intergenic not near genes chrX 6897644 intergenic not near genes chrX_6_6895001 chrX_6895001 RAL-306_125b 3491 chrX 6897569 6897585 chrX 7243815 7243831 6 346246 9.0 10.0 9.5 0.6 346262 chrX 6897569 intergenic not near genes chrX 7070700 exon CG4607 + chrX 7243831 intron CR44357 - chrX_6_7070001 chrX_7070001 RAL-306_125b 3492 chrX 6897640 6897710 chrX 6897800 6897870 18 160 3.0 3.5 3.2 4.3 230 chrX 6897640 intergenic not near genes chrX 6897755 intergenic not near genes chrX 6897870 intergenic not near genes chrX_18_6895001 chrX_6895001 RAL-306_125b 3493 chrX 6901331 6901381 chrX 6901457 6901493 13 117 6.5 9.5 8.0 1.4 162 chrX 6901331 intergenic not near genes chrX 6901412 intergenic not near genes chrX 6901493 intergenic not near genes chrX_13_6900001 chrX_6900001 RAL-306_125b 3494 chrX 6950363 6950433 chrX 6950496 6950535 7 121 5.5 7.5 6.5 0.9 172 chrX 6950363 intron CG14431 + chrX 6950449 intron CG14431 + chrX 6950535 intron CG14431 + chrX_7_6950001 chrX_6950001 RAL-306_125b 3495 chrX 6989475 6989511 chrX 6989612 6989648 10 137 11.5 10.5 11.0 0.8 173 chrX 6989475 intron ogre - chrX 6989562 intron ogre - chrX 6989648 intron ogre - chrX_10_6985001 chrX_6985001 RAL-306_125b 3496 chrX 7023561 7023632 chrX 7031001 7031020 Tabor 21 7436 7.0 8.5 7.8 2.4 7459 chrX 7023561 intron CG12541 - chrX 7027290 intron CG12541 - chrX 7031020 intron CG12541 - chrX_21_7025001 chrX_7025001 RAL-306_125b 3497 chrX 7125223 7125261 chrX 7134402 7134405 roo 13 9201 0.0 2.0 1.0 6.5 9182 chrX 7125223 intergenic not near genes chrX 7129814 intergenic not near genes chrX 7134405 intergenic not near genes chrX_13_7125001 chrX_7125001 RAL-306_125b 3498 chrX 7235523 7235540 chrX 7235660 7235677 5 137 8.0 8.0 8.0 0.6 154 chrX 7235523 intron,intron CG9650 +,CR44357 - chrX 7235600 intron,intron CG9650 +,CR44357 - chrX 7235677 intron,intron CG9650 +,CR44357 - chrX_5_7235001 chrX_7235001 RAL-306_125b 3499 chrX 7294477 7294536 chrX 7294625 7294664 8 140 4.5 7.0 5.8 1.2 187 chrX 7294477 intron,intron CR44357 -,CG1677 - chrX 7294570 intron,intron CR44357 -,CG1677 - chrX 7294664 intron,intron CR44357 -,CG1677 - chrX_8_7290001 chrX_7290001 RAL-306_125b 3500 chrX 7345157 7345212 chrX 7345299 7345354 16 141 8.5 7.0 7.8 1.8 197 chrX 7345157 intron,intron CR44357 -,CG1677 - chrX 7345256 intron,intron CR44357 -,CG1677 - chrX 7345354 intron,intron CR44357 -,CG1677 - chrX_16_7345001 chrX_7345001 RAL-306_125b 3501 chrX 7357245 7357267 chrX 7357354 7357393 5 123 10.5 11.0 10.8 0.4 148 chrX 7357245 intron,intron CR44357 -,CG1677 - chrX 7357319 intron,intron CR44357 -,CG1677 - chrX 7357393 intron,intron CR44357 -,CG1677 - chrX_5_7355001 chrX_7355001 RAL-306_125b 3502 chrX 7376941 7376950 chrX 7377073 7377082 5 132 4.0 6.0 5.0 0.8 141 chrX 7376941 intron,intron CR44357 -,CG1677 - chrX 7377012 intron,intron CR44357 -,CG1677 - chrX 7377082 intron,intron CR44357 -,CG1677 - chrX_5_7375001 chrX_7375001 RAL-306_125b 3503 chrX 7401667 7401726 chrX 7401793 7401852 4 126 7.0 5.0 6.0 0.6 185 chrX 7401667 intron,intron CR44357 -,CG1677 - chrX 7401760 intron,intron,3` UTR CR44357 -,CG1677 -,CG15035 - chrX 7401852 intron,intron,3` UTR CR44357 -,CG1677 -,CG15035 - chrX_4_7400001 chrX_7400001 RAL-306_125b 3504 chrX 7470176 7470213 chrX 7470314 7470351 8 138 5.0 8.5 6.8 1.0 175 chrX 7470176 intergenic not near genes chrX 7470264 intergenic not near genes chrX 7470351 intergenic not near genes chrX_8_7470001 chrX_7470001 RAL-306_125b 3505 chrX 7582293 7582343 chrX 7582418 7582445 13 122 9.0 6.5 7.8 1.5 152 chrX 7582293 intergenic not near genes chrX 7582369 intergenic not near genes chrX 7582445 intergenic not near genes chrX_13_7580001 chrX_7580001 RAL-306_125b 3506 chrX 7679906 7679918 chrX 7680209 7680221 4 303 16.0 15.0 15.5 0.2 315 chrX 7679906 intergenic CR45666 -,CR45667 - chrX 7680064 3` UTR CR45666 - chrX 7680221 3` UTR CR45666 - chrX_4_7680001 chrX_7680001 RAL-306_125b 3507 chrX 7680058 7680126 chrX 7680190 7680258 15 130 5.5 12.0 8.8 1.5 200 chrX 7680058 3` UTR CR45666 - chrX 7680158 3` UTR CR45666 - chrX 7680258 3` UTR CR45666 - chrX_15_7680001 chrX_7680001 RAL-306_125b 3508 chrX 7679858 7679860 chrX 7680426 7680495 22 575 22.0 36.5 29.2 0.7 637 chrX 7679858 intergenic CR45666 -,CR45667 - chrX 7680176 3` UTR CR45666 - chrX 7680495 3` UTR CR45666 - chrX_22_7680001 chrX_7680001 RAL-306_125b 3509 chrX 7702455 7702525 chrX 7702609 7702640 6 142 0.0 6.0 3.0 1.5 185 chrX 7702455 intron CHES-1-like - chrX 7702548 intron CHES-1-like - chrX 7702640 intron CHES-1-like - chrX_6_7700001 chrX_7700001 RAL-306_125b 3510 chrX 7702863 7702920 chrX 7703352 7703398 jockey 20 485 5.0 8.5 6.8 2.6 535 chrX 7702863 intron CHES-1-like - chrX 7703130 intron CHES-1-like - chrX 7703398 intron CHES-1-like - chrX_20_7700001 chrX_7700001 RAL-306_125b 3511 chrX 7720519 7720539 chrX 7720651 7720671 4 132 10.0 1.0 5.5 0.6 152 chrX 7720519 intergenic not near genes chrX 7720595 intergenic not near genes chrX 7720671 intergenic not near genes chrX_4_7720001 chrX_7720001 RAL-306_125b 3512 chrX 7720540 7720573 chrX 7720642 7720705 5 126 7.5 0.5 4.0 1.0 165 chrX 7720540 intergenic not near genes chrX 7720622 intergenic not near genes chrX 7720705 intergenic not near genes chrX_5_7720001 chrX_7720001 RAL-306_125b 3513 chrX 7737081 7737146 chrX 7737243 7737308 11 162 5.0 3.5 4.2 2.1 227 chrX 7737081 5` UTR Tom40 + chrX 7737194 intron Tom40 + chrX 7737308 intron Tom40 + chrX_11_7735001 chrX_7735001 RAL-306_125b 3514 chrX 7832406 7832422 chrX 7832530 7832561 13 138 11.5 3.5 7.5 1.5 155 chrX 7832406 intron CG1402 + chrX 7832484 intron CG1402 + chrX 7832561 intron CG1402 + chrX_13_7830001 chrX_7830001 RAL-306_125b 3515 chrX 7832426 7832463 chrX 7832529 7832602 12 130 2.5 3.5 3.0 3.0 176 chrX 7832426 intron CG1402 + chrX 7832514 intron CG1402 + chrX 7832602 intron CG1402 + chrX_12_7830001 chrX_7830001 RAL-306_125b 3516 chrX 7845691 7845695 chrX 7847232 7847234 hopper2 6 1540 15.0 4.0 9.5 0.6 1543 chrX 7845691 intergenic not near genes chrX 7846462 intergenic not near genes chrX 7847234 intergenic not near genes chrX_6_7845001 chrX_7845001 RAL-306_125b 3517 chrX 7845698 7845752 chrX 7847217 7847293 hopper2 18 1537 5.5 2.5 4.0 3.6 1595 chrX 7845698 intergenic not near genes chrX 7846496 intergenic not near genes chrX 7847293 intergenic not near genes chrX_18_7845001 chrX_7845001 RAL-306_125b 3518 chrX 7858731 7858771 chrX 7858857 7858897 14 126 7.0 1.5 4.2 2.7 166 chrX 7858731 3` UTR CG1409 + chrX 7858814 intergenic CG1409 + chrX 7858897 intergenic CG1409 + chrX_14_7855001 chrX_7855001 RAL-306_125b 3519 chrX 7960827 7960904 chrX 7960966 7961043 27 137 6.5 7.0 6.8 3.5 216 chrX 7960827 intron,5` UTR sws -,CR45620 + chrX 7960935 intron sws - chrX 7961043 intron sws - chrX_27_7960001 chrX_7960001 RAL-306_125b 3520 chrX 8092242 8092317 chrX 8092377 8092452 33 135 3.5 6.0 4.8 5.7 210 chrX 8092242 intron Ubc-E2H - chrX 8092347 intron Ubc-E2H - chrX 8092452 intron Ubc-E2H - chrX_33_8090001 chrX_8090001 RAL-306_125b 3521 chrX 8330383 8330435 chrX 8330515 8330567 9 130 4.5 4.5 4.5 1.6 184 chrX 8330383 intron nAChRalpha3 - chrX 8330475 intron nAChRalpha3 - chrX 8330567 intron nAChRalpha3 - chrX_9_8330001 chrX_8330001 RAL-306_125b 3522 chrX 8364805 8364861 chrX 8365259 8365315 BS 20 454 3.5 9.0 6.2 2.8 510 chrX 8364805 intron nAChRalpha3 - chrX 8365060 intron nAChRalpha3 - chrX 8365315 intron nAChRalpha3 - chrX_20_8365001 chrX_8365001 RAL-306_125b 3523 chrX 8371678 8371744 chrX 8371816 8371882 17 137 8.0 3.0 5.5 2.6 204 chrX 8371678 intergenic not near genes chrX 8371780 intergenic not near genes chrX 8371882 intergenic not near genes chrX_17_8370001 chrX_8370001 RAL-306_125b 3524 chrX 8377874 8377898 chrX 8378001 8378025 9 127 8.0 7.5 7.8 1.0 151 chrX 8377874 intergenic not near genes chrX 8377950 intergenic not near genes chrX 8378025 intergenic not near genes chrX_9_8375001 chrX_8375001 RAL-306_125b 3525 chrX 8397244 8397323 chrX 8397370 8397458 11 127 3.5 1.5 2.5 3.1 214 chrX 8397244 3` UTR CG15345 - chrX 8397351 3` UTR CG15345 - chrX 8397458 exon CG15345 - chrX_11_8395001 chrX_8395001 RAL-306_125b 3526 chrX 8505984 8506059 chrX 8506112 8506162 22 126 7.0 10.5 8.8 2.2 178 chrX 8505984 intron CG33181 + chrX 8506073 intron CG33181 + chrX 8506162 intron CG33181 + chrX_22_8505001 chrX_8505001 RAL-306_125b 3527 chrX 8506484 8506558 chrX 8506742 8506816 27 258 7.0 8.5 7.8 3.1 332 chrX 8506484 intron CG33181 + chrX 8506650 intron CG33181 + chrX 8506816 intron CG33181 + chrX_27_8505001 chrX_8505001 RAL-306_125b 3528 chrX 8509076 8509112 chrX 8509203 8509239 8 127 1.5 5.5 3.5 1.8 163 chrX 8509076 intron CG33181 + chrX 8509158 intron CG33181 + chrX 8509239 intron CG33181 + chrX_8_8505001 chrX_8505001 RAL-306_125b 3529 chrX 8509120 8509147 chrX 8509197 8509274 6 119 2.5 4.5 3.5 1.3 154 chrX 8509120 intron CG33181 + chrX 8509197 intron CG33181 + chrX 8509274 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-306_125b 3530 chrX 8544109 8544163 chrX 8544238 8544292 17 129 3.0 6.5 4.8 2.9 183 chrX 8544109 intron Nrg + chrX 8544200 intron Nrg + chrX 8544292 intron Nrg + chrX_17_8540001 chrX_8540001 RAL-306_125b 3531 chrX 8787441 8787483 chrX 8787583 8787605 6 138 5.0 3.0 4.0 1.2 164 chrX 8787441 intron Lim1 - chrX 8787523 intron Lim1 - chrX 8787605 intron Lim1 - chrX_6_8785001 chrX_8785001 RAL-306_125b 3532 chrX 8832225 8832280 chrX 8832351 8832406 11 122 3.0 8.5 5.8 1.6 181 chrX 8832225 intergenic not near genes chrX 8832316 intergenic not near genes chrX 8832406 intergenic not near genes chrX_11_8830001 chrX_8830001 RAL-306_125b 3533 chrX 8834790 8834863 chrX 8834919 8834992 17 128 7.5 6.5 7.0 2.1 202 chrX 8834790 intergenic not near genes chrX 8834891 intergenic CR45537 + chrX 8834992 intergenic CR45537 + chrX_17_8830001 chrX_8830001 RAL-306_125b 3534 chrX 8894952 8895001 chrX 8895087 8895137 6 136 9.0 3.0 6.0 0.9 185 chrX 8894952 intron Moe - chrX 8895044 intron Moe - chrX 8895137 intron Moe - chrX_6_8895001 chrX_8895001 RAL-306_125b 3535 chrX 8913486 8913543 chrX 8913638 8913682 18 158 3.5 5.5 4.5 3.3 196 chrX 8913486 intron rdgA + chrX 8913584 intron rdgA + chrX 8913682 intron rdgA + chrX_18_8910001 chrX_8910001 RAL-306_125b 3536 chrX 8922284 8922351 chrX 8922768 8922835 jockey 15 478 5.0 8.0 6.5 2.0 551 chrX 8922284 intron rdgA + chrX 8922560 intron rdgA + chrX 8922835 intron rdgA + chrX_15_8920001 chrX_8920001 RAL-306_125b 3537 chrX 8927548 8927607 chrX 8929868 8929925 NOF 16 2317 10.5 7.5 9.0 1.6 2377 chrX 8927548 intron rdgA + chrX 8928736 intron rdgA + chrX 8929925 intron rdgA + chrX_16_8925001 chrX_8925001 RAL-306_125b 3538 chrX 8948713 8948785 chrX 8956273 8956345 roo 11 7559 0.0 5.5 2.8 2.9 7632 chrX 8948713 intron rdgA + chrX 8952529 intron rdgA + chrX 8956345 intron rdgA + chrX_11_8950001 chrX_8950001 RAL-306_125b 3539 chrX 8968817 8968860 chrX 8968941 8968961 11 121 11.0 10.5 10.8 0.9 144 chrX 8968817 intron rdgA + chrX 8968889 intron rdgA + chrX 8968961 intron rdgA + chrX_11_8965001 chrX_8965001 RAL-306_125b 3540 chrX 8971846 8971912 chrX 8971970 8971990 15 125 8.5 3.0 5.8 2.2 144 chrX 8971846 intron rdgA + chrX 8971918 intron rdgA + chrX 8971990 intron rdgA + chrX_15_8970001 chrX_8970001 RAL-306_125b 3541 chrX 9062700 9062755 chrX 9062803 9062858 7 121 2.5 1.0 1.8 2.5 158 chrX 9062700 intron CG15365 - chrX 9062779 intron CG15365 - chrX 9062858 intron CG15365 - chrX_7_9060001 chrX_9060001 RAL-306_125b 3542 chrX 9337907 9337970 chrX 9338049 9338053 12 136 3.0 10.0 6.5 1.6 146 chrX 9337907 intron CG34449 - chrX 9337980 intron CG34449 - chrX 9338053 exon CG34449 - chrX_12_9335001 chrX_9335001 RAL-306_125b 3543 chrX 9503211 9503211 chrX 22383372 22383377 4 12880164 29.0 30.0 29.5 0.1 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_4_15940001 chrX_15940001 RAL-306_125b 3544 chrX 9508110 9508157 chrX 9509678 9509725 jockey 8 1568 5.5 5.5 5.5 1.2 1615 chrX 9508110 intron CG32700 - chrX 9508918 intron CG32700 - chrX 9509725 intron CG32700 - chrX_8_9505001 chrX_9505001 RAL-306_125b 3545 chrX 9529198 9529266 chrX 9529381 9529444 24 181 4.5 6.5 5.5 3.7 246 chrX 9529198 intron CG32700 - chrX 9529321 intron CG32700 - chrX 9529444 intron CG32700 - chrX_24_9525001 chrX_9525001 RAL-306_125b 3546 chrX 9575749 9575812 chrX 9576123 9576186 mdg3 13 373 8.0 11.0 9.5 1.2 437 chrX 9575749 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576186 intron,5` UTR CG32699 -,CG42395 - chrX_13_9575001 chrX_9575001 RAL-306_125b 3547 chrX 9732330 9732381 chrX 9732456 9732513 11 127 0.5 3.5 2.0 3.7 183 chrX 9732330 intron Sp1 + chrX 9732422 intron Sp1 + chrX 9732513 intron Sp1 + chrX_11_9730001 chrX_9730001 RAL-306_125b 3548 chrX 9758005 9758051 chrX 9758140 9758181 5 133 8.0 0.0 4.0 1.0 176 chrX 9758005 intergenic not near genes chrX 9758093 intergenic not near genes chrX 9758181 intergenic not near genes chrX_5_9755001 chrX_9755001 RAL-306_125b 3549 chrX 9791815 9791895 chrX 9791958 9792020 10 139 5.0 4.5 4.8 1.7 205 chrX 9791815 intron CG32698 + chrX 9791918 intron CG32698 + chrX 9792020 intron CG32698 + chrX_10_9790001 chrX_9790001 RAL-306_125b 3550 chrX 9815482 9815502 chrX 9815645 9815660 4 161 13.0 6.5 9.8 0.4 178 chrX 9815482 intron CG32698 + chrX 9815571 intron CG32698 + chrX 9815660 intron CG32698 + chrX_4_9815001 chrX_9815001 RAL-306_125b 3551 chrX 9839300 9839365 chrX 9839433 9839491 11 132 0.0 1.0 0.5 7.3 191 chrX 9839300 intron CG32698 + chrX 9839396 intron CG32698 + chrX 9839491 intron CG32698 + chrX_11_9835001 chrX_9835001 RAL-306_125b 3552 chrX 9847469 9847501 chrX 9847609 9847610 5 134 11.5 12.0 11.8 0.4 141 chrX 9847469 intron CG32698 + chrX 9847540 intron CG32698 + chrX 9847610 intron CG32698 + chrX_5_9845001 chrX_9845001 RAL-306_125b 3553 chrX 10138174 10138239 chrX 10145728 10145790 412 22 7552 6.0 10.0 8.0 2.4 7616 chrX 10138174 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145790 intron,intron RhoU +,CR44894 - chrX_22_10140001 chrX_10140001 RAL-306_125b 3554 chrX 10151876 10151931 chrX 10152003 10152058 13 124 6.0 7.0 6.5 1.7 182 chrX 10151876 intron CR44894 - chrX 10151967 intron CR44894 - chrX 10152058 intron CR44894 - chrX_13_10150001 chrX_10150001 RAL-306_125b 3555 chrX 10154236 10154309 chrX 10154362 10154419 16 120 4.5 4.0 4.2 3.1 183 chrX 10154236 intron,intron CR44894 -,CG12645 + chrX 10154328 intron,intron CR44894 -,CG12645 + chrX 10154419 intron,exon CR44894 -,CG12645 + chrX_16_10150001 chrX_10150001 RAL-306_125b 3556 chrX 10216801 10216851 chrX 10216932 10216942 20 126 10.0 8.5 9.2 2.0 141 chrX 10216801 3` UTR l(1)G0230 + chrX 10216872 3` UTR l(1)G0230 + chrX 10216942 3` UTR l(1)G0230 + chrX_20_10215001 chrX_10215001 RAL-306_125b 3557 chrX 10267295 10267329 chrX 10276495 10276529 roo 11 9200 2.5 8.5 5.5 1.7 9234 chrX 10267295 3` UTR alpha-Man-I - chrX 10271912 intron alpha-Man-I - chrX 10276529 3` UTR alpha-Man-I - chrX_11_10270001 chrX_10270001 RAL-306_125b 3558 chrX 10317526 10317538 chrX 10317654 10317666 6 128 1.5 10.0 5.8 0.9 140 chrX 10317526 intron alpha-Man-I - chrX 10317596 intron alpha-Man-I - chrX 10317666 intron alpha-Man-I - chrX_6_10315001 chrX_10315001 RAL-306_125b 3559 chrX 10317539 10317578 chrX 10317640 10317706 14 126 1.0 7.5 4.2 2.7 167 chrX 10317539 intron alpha-Man-I - chrX 10317622 intron alpha-Man-I - chrX 10317706 intron alpha-Man-I - chrX_14_10315001 chrX_10315001 RAL-306_125b 3560 chrX 10348754 10348822 chrX 10356369 10356437 springer 16 7612 7.5 8.0 7.8 1.8 7683 chrX 10348754 intergenic snoRNA:U3:9B + chrX 10352596 intergenic not near genes chrX 10356437 intergenic l(1)G0289 - chrX_16_10350001 chrX_10350001 RAL-306_125b 3561 chrX 10431292 10431366 chrX 10431422 10431479 15 129 7.0 7.5 7.2 1.8 187 chrX 10431292 intron CG32683 - chrX 10431386 intron CG32683 - chrX 10431479 intron CG32683 - chrX_15_10430001 chrX_10430001 RAL-306_125b 3562 chrX 10451035 10451115 chrX 10451168 10451248 22 132 6.5 7.0 6.8 2.8 213 chrX 10451035 intron CG32683 - chrX 10451142 intron CG32683 - chrX 10451248 intron CG32683 - chrX_22_10450001 chrX_10450001 RAL-306_125b 3563 chrX 10550292 10550359 chrX 10550420 10550472 13 127 4.5 5.5 5.0 2.2 180 chrX 10550292 intron spri - chrX 10550382 intron spri - chrX 10550472 intron spri - chrX_13_10550001 chrX_10550001 RAL-306_125b 3564 chrX 10550814 10550880 chrX 10552331 10552377 hobo 14 1509 5.0 4.5 4.8 2.4 1563 chrX 10550814 intron spri - chrX 10551596 intron spri - chrX 10552377 intron spri - chrX_14_10550001 chrX_10550001 RAL-306_125b 3565 chrX 10686012 10686077 chrX 10691199 10691264 roo 13 5187 7.0 7.0 7.0 1.6 5252 chrX 10686012 intron X11Lbeta + chrX 10688638 intron X11Lbeta + chrX 10691264 intron X11Lbeta + chrX_13_10685001 chrX_10685001 RAL-306_125b 3566 chrX 10710109 10710181 chrX 10710432 10710494 17 327 4.0 7.0 5.5 2.6 385 chrX 10710109 3` UTR X11Lbeta + chrX 10710302 3` UTR X11Lbeta + chrX 10710494 3` UTR X11Lbeta + chrX_17_10710001 chrX_10710001 RAL-306_125b 3567 chrX 10772631 10772694 chrX 10772764 10772827 Tirant 13 126 9.5 6.5 8.0 1.4 196 chrX 10772631 intron CG15211 + chrX 10772729 intron CG15211 + chrX 10772827 intron CG15211 + chrX_13_10770001 chrX_10770001 RAL-306_125b 3568 chrX 10803008 10803045 chrX 10803118 10803180 12 127 11.0 9.0 10.0 1.1 172 chrX 10803008 intron Imp - chrX 10803094 intron Imp - chrX 10803180 intron Imp - chrX_12_10800001 chrX_10800001 RAL-306_125b 3569 chrX 10911927 10911988 chrX 10912082 10912143 19 152 7.5 9.0 8.2 2.1 216 chrX 10911927 intron CG43901 + chrX 10912035 intron CG43901 + chrX 10912143 intron CG43901 + chrX_19_10910001 chrX_10910001 RAL-306_125b 3570 chrX 11095956 11096016 chrX 11103108 11103168 HMS-Beagle 16 7152 6.5 10.5 8.5 1.7 7212 chrX 11095956 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103168 intron CG42249 + chrX_16_11095001 chrX_11095001 RAL-306_125b 3571 chrX 11109417 11109417 chrX 12946233 12946235 4 1836817 37.0 28.0 32.5 0.1 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-306_125b 3572 chrX 11141991 11142092 chrX 11142140 11142171 8 132 2.5 6.0 4.2 1.5 180 chrX 11141991 intergenic CG15199 - chrX 11142081 intergenic CG15199 -,CG15202 + chrX 11142171 intergenic CG15199 -,CG15202 + chrX_8_11140001 chrX_11140001 RAL-306_125b 3573 chrX 11165828 11165902 chrX 11166210 11166284 10 374 6.5 7.0 6.8 1.3 456 chrX 11165828 intergenic not near genes chrX 11166056 intergenic not near genes chrX 11166284 intergenic not near genes chrX_10_11165001 chrX_11165001 RAL-306_125b 3574 chrX 11184219 11184272 chrX 11189335 11189359 flea 13 5116 4.0 6.0 5.0 2.2 5140 chrX 11184219 intergenic not near genes chrX 11186789 intergenic not near genes chrX 11189359 intergenic not near genes chrX_13_11185001 chrX_11185001 RAL-306_125b 3575 chrX 11205265 11205312 chrX 11205391 11205438 8 126 9.0 7.5 8.2 0.9 173 chrX 11205265 intergenic not near genes chrX 11205352 intergenic not near genes chrX 11205438 intergenic not near genes chrX_8_11205001 chrX_11205001 RAL-306_125b 3576 chrX 11254122 11254189 chrX 11254283 11254350 23 160 5.0 4.5 4.8 4.0 228 chrX 11254122 intron CG44422 - chrX 11254236 intron CG44422 - chrX 11254350 intron CG44422 - chrX_23_11250001 chrX_11250001 RAL-306_125b 3577 chrX 11291645 11291708 chrX 11291777 11291840 11 125 4.5 6.5 5.5 1.7 195 chrX 11291645 intron CG44422 - chrX 11291742 intron CG44422 - chrX 11291840 intron CG44422 - chrX_11_11290001 chrX_11290001 RAL-306_125b 3578 chrX 11312019 11312077 chrX 11319422 11319467 Stalker2 10 7400 6.0 6.5 6.2 1.4 7448 chrX 11312019 intergenic not near genes chrX 11315743 intergenic not near genes chrX 11319467 intergenic not near genes chrX_10_11315001 chrX_11315001 RAL-306_125b 3579 chrX 11499065 11499129 chrX 11499193 11499257 19 127 4.0 6.0 5.0 3.2 192 chrX 11499065 intron Drak + chrX 11499161 intron Drak + chrX 11499257 intron Drak + chrX_19_11495001 chrX_11495001 RAL-306_125b 3580 chrX 11535001 11535043 chrX 11541521 11541563 Burdock 22 6518 11.0 6.5 8.8 2.2 6562 chrX 11535001 intron Drak + chrX 11538282 intron Drak + chrX 11541563 intron Drak + chrX_22_11535001 chrX_11535001 RAL-306_125b 3581 chrX 11544195 11544261 chrX 11544353 11544393 14 153 5.5 2.0 3.8 2.9 198 chrX 11544195 intron Drak + chrX 11544294 intron Drak + chrX 11544393 intron Drak + chrX_14_11540001 chrX_11540001 RAL-306_125b 3582 chrX 11633394 11633431 chrX 11640475 11640535 297 5 7099 6.0 8.0 7.0 0.6 7141 chrX 11633394 intron Ptp10D + chrX 11636964 intron Ptp10D + chrX 11640535 intron Ptp10D + chrX_5_11635001 chrX_11635001 RAL-306_125b 3583 chrX 11645068 11645106 chrX 11648287 11648326 NOF 8 3220 9.0 9.0 9.0 0.8 3258 chrX 11645068 intron Ptp10D + chrX 11646697 intron Ptp10D + chrX 11648326 intron Ptp10D + chrX_8_11645001 chrX_11645001 RAL-306_125b 3584 chrX 11645107 11645131 chrX 11648284 11648351 NOF 8 3210 6.5 8.5 7.5 0.9 3244 chrX 11645107 intron Ptp10D + chrX 11646729 intron Ptp10D + chrX 11648351 intron Ptp10D + chrX_8_11645001 chrX_11645001 RAL-306_125b 3585 chrX 11685730 11685770 chrX 11685866 11685918 10 141 17.0 3.5 10.2 0.9 188 chrX 11685730 intron bif + chrX 11685824 intron bif + chrX 11685918 intron bif + chrX_10_11685001 chrX_11685001 RAL-306_125b 3586 chrX 11719830 11719892 chrX 11719960 11720009 14 127 10.0 11.0 10.5 1.2 179 chrX 11719830 3` UTR prtp + chrX 11719920 intergenic prtp +,Tango10 + chrX 11720009 intergenic prtp +,Tango10 + chrX_14_11715001 chrX_11715001 RAL-306_125b 3587 chrX 11761969 11761991 chrX 11762097 11762120 6 127 3.0 2.0 2.5 1.7 151 chrX 11761969 intron m + chrX 11762044 intron m + chrX 11762120 intron m + chrX_6_11760001 chrX_11760001 RAL-306_125b 3588 chrX 11798971 11799028 chrX 11799107 11799164 10 136 7.0 9.0 8.0 1.1 193 chrX 11798971 intron CkIIbeta + chrX 11799068 intron CkIIbeta + chrX 11799164 intron CkIIbeta + chrX_10_11795001 chrX_11795001 RAL-306_125b 3589 chrX 11804628 11804690 chrX 11804782 11804844 17 154 6.0 3.5 4.8 2.9 216 chrX 11804628 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804844 intron Hsc70-3 - chrX_17_11800001 chrX_11800001 RAL-306_125b 3590 chrX 11838979 11839052 chrX 11839283 11839350 12 302 5.0 1.5 3.2 2.9 371 chrX 11838979 intergenic not near genes chrX 11839164 intergenic Cyp28c1 + chrX 11839350 intergenic Cyp28c1 + chrX_12_11835001 chrX_11835001 RAL-306_125b 3591 chrX 12038038 12038115 chrX 12038282 12038309 24 237 3.5 4.0 3.8 5.0 271 chrX 12038038 intergenic not near genes chrX 12038174 intergenic not near genes chrX 12038309 intergenic not near genes chrX_24_12035001 chrX_12035001 RAL-306_125b 3592 chrX 12136388 12136449 chrX 12136924 12136985 16 535 9.0 5.0 7.0 2.0 597 chrX 12136388 intron Ten-a + chrX 12136686 intron Ten-a + chrX 12136985 intron Ten-a + chrX_16_12135001 chrX_12135001 RAL-306_125b 3593 chrX 12168119 12168147 chrX 12173606 12173628 I-element 4 5488 5.5 2.5 4.0 0.8 5509 chrX 12168119 intron Ten-a + chrX 12170874 intron Ten-a + chrX 12173628 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-306_125b 3594 chrX 12194894 12194961 chrX 12195062 12195129 17 167 4.5 2.0 3.2 4.0 235 chrX 12194894 intron Ten-a + chrX 12195012 intron Ten-a + chrX 12195129 intron Ten-a + chrX_17_12195001 chrX_12195001 RAL-306_125b 3595 chrX 12202732 12202794 chrX 12202866 12202928 17 132 4.5 6.0 5.2 2.7 196 chrX 12202732 intron Ten-a + chrX 12202830 intron Ten-a + chrX 12202928 intron Ten-a + chrX_17_12200001 chrX_12200001 RAL-306_125b 3596 chrX 12241145 12241225 chrX 12241277 12241307 22 125 3.0 3.5 3.2 5.2 162 chrX 12241145 intron Ten-a + chrX 12241226 intron Ten-a + chrX 12241307 intron Ten-a + chrX_22_12240001 chrX_12240001 RAL-306_125b 3597 chrX 12246945 12246962 chrX 12247083 12247100 6 138 7.5 9.0 8.2 0.7 155 chrX 12246945 intron Ten-a + chrX 12247022 intron Ten-a + chrX 12247100 intron Ten-a + chrX_6_12245001 chrX_12245001 RAL-306_125b 3598 chrX 12348151 12348188 chrX 12348284 12348319 7 133 9.5 3.5 6.5 0.9 168 chrX 12348151 intergenic not near genes chrX 12348235 intergenic not near genes chrX 12348319 intergenic not near genes chrX_7_12345001 chrX_12345001 RAL-306_125b 3599 chrX 12350739 12350802 chrX 12350870 12350939 8 129 4.0 6.0 5.0 1.3 200 chrX 12350739 intergenic not near genes chrX 12350839 intergenic not near genes chrX 12350939 intergenic not near genes chrX_8_12350001 chrX_12350001 RAL-306_125b 3600 chrX 12375441 12375498 chrX 12375589 12375646 7 146 7.5 3.0 5.2 1.1 205 chrX 12375441 intergenic Ir11a - chrX 12375544 intergenic Ir11a - chrX 12375646 exon Ir11a - chrX_7_12375001 chrX_12375001 RAL-306_125b 3601 chrX 12381813 12381897 chrX 12385776 12385849 flea 11 3957 1.5 6.5 4.0 2.2 4036 chrX 12381813 intergenic not near genes chrX 12383831 intergenic not near genes chrX 12385849 intergenic not near genes chrX_11_12380001 chrX_12380001 RAL-306_125b 3602 chrX 12392757 12393046 chrX 12392883 12393179 15 126 9.5 6.0 7.8 1.7 422 chrX 12392757 intergenic not near genes chrX 12392968 intergenic not near genes chrX 12393179 intergenic not near genes chrX_15_12390001 chrX_12390001 RAL-306_125b 3603 chrX 12428303 12428367 chrX 12428465 12428529 10 161 6.5 5.5 6.0 1.4 226 chrX 12428303 intergenic not near genes chrX 12428416 intergenic not near genes chrX 12428529 intergenic not near genes chrX_10_12425001 chrX_12425001 RAL-306_125b 3604 chrX 12435333 12435362 chrX 12435456 12435485 13 127 5.0 9.0 7.0 1.6 152 chrX 12435333 exon Pkcdelta + chrX 12435409 intron Pkcdelta + chrX 12435485 intron Pkcdelta + chrX_13_12435001 chrX_12435001 RAL-306_125b 3605 chrX 12442046 12442117 chrX 12442178 12442249 13 132 5.5 1.0 3.2 3.1 203 chrX 12442046 intron Pkcdelta + chrX 12442148 intron Pkcdelta + chrX 12442249 intron Pkcdelta + chrX_13_12440001 chrX_12440001 RAL-306_125b 3606 chrX 12465425 12465479 chrX 12465551 12465605 9 121 2.0 1.0 1.5 3.6 180 chrX 12465425 exon CG42258 + chrX 12465515 intron CG42258 + chrX 12465605 intron CG42258 + chrX_9_12465001 chrX_12465001 RAL-306_125b 3607 chrX 12489170 12489178 chrX 12489380 12489404 6 222 3.5 17.5 10.5 0.5 234 chrX 12489170 3` UTR Cpr11A + chrX 12489287 3` UTR Cpr11A + chrX 12489404 3` UTR Cpr11A + chrX_6_12485001 chrX_12485001 RAL-306_125b 3608 chrX 12511277 12511347 chrX 12511409 12511481 9 132 0.0 5.5 2.8 2.4 204 chrX 12511277 intron CG2556 + chrX 12511379 intron CG2556 + chrX 12511481 intron CG2556 + chrX_9_12510001 chrX_12510001 RAL-306_125b 3609 chrX 12528816 12528838 chrX 12528942 12528964 6 126 14.0 6.5 10.2 0.5 148 chrX 12528816 intron CG43921 - chrX 12528890 intron CG43921 - chrX 12528964 intron CG43921 - chrX_6_12525001 chrX_12525001 RAL-306_125b 3610 chrX 12532594 12532670 chrX 12532790 12532841 7 185 4.5 0.5 2.5 2.0 247 chrX 12532594 intron CG43921 - chrX 12532718 intron CG43921 - chrX 12532841 intron CG43921 - chrX_7_12530001 chrX_12530001 RAL-306_125b 3611 chrX 12635408 12635430 chrX 12635543 12635565 5 135 4.5 8.0 6.2 0.7 157 chrX 12635408 intron Tomosyn + chrX 12635486 intron Tomosyn + chrX 12635565 intron Tomosyn + chrX_5_12635001 chrX_12635001 RAL-306_125b 3612 chrX 12705345 12705412 chrX 12705478 12705543 9 131 4.5 2.0 3.2 2.1 198 chrX 12705345 intron Smr - chrX 12705444 intron Smr - chrX 12705543 intron Smr - chrX_9_12705001 chrX_12705001 RAL-306_125b 3613 chrX 12752234 12752306 chrX 12752371 12752443 29 137 10.5 8.5 9.5 2.8 209 chrX 12752234 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752443 intron CR44619 + chrX_29_12750001 chrX_12750001 RAL-306_125b 3614 chrX 12837553 12837630 chrX 12837884 12837959 17 327 7.5 4.0 5.8 2.5 406 chrX 12837553 intron Pde9 - chrX 12837756 intron Pde9 - chrX 12837959 intron Pde9 - chrX_17_12835001 chrX_12835001 RAL-306_125b 3615 chrX 12853287 12853361 chrX 12853422 12853503 12 132 6.5 0.0 3.2 2.9 216 chrX 12853287 intron Pde9 - chrX 12853395 intron Pde9 - chrX 12853503 intron Pde9 - chrX_12_12850001 chrX_12850001 RAL-306_125b 3616 chrX 12859061 12859066 chrX 12859186 12859196 4 128 10.5 13.0 11.8 0.3 135 chrX 12859061 intron Pde9 - chrX 12859128 intron Pde9 - chrX 12859196 intron Pde9 - chrX_4_12855001 chrX_12855001 RAL-306_125b 3617 chrX 12859067 12859116 chrX 12859180 12859220 8 124 6.5 12.0 9.2 0.8 153 chrX 12859067 intron Pde9 - chrX 12859144 intron Pde9 - chrX 12859220 intron Pde9 - chrX_8_12855001 chrX_12855001 RAL-306_125b 3618 chrX 12912583 12912662 chrX 12912732 12912809 5 148 2.5 4.5 3.5 1.1 226 chrX 12912583 5` UTR CR45625 + chrX 12912696 5` UTR CR45625 + chrX 12912809 5` UTR CR45625 + chrX_5_12910001 chrX_12910001 RAL-306_125b 3619 chrX 12930554 12930598 chrX 12937720 12937764 HMS-Beagle 16 7166 8.5 15.0 11.8 1.2 7210 chrX 12930554 intron fne + chrX 12934159 intron fne + chrX 12937764 intron fne + chrX_16_12930001 chrX_12930001 RAL-306_125b 3620 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 37.0 28.0 32.5 0.1 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-306_125b 3621 chrX 12953852 12953911 chrX 12954035 12954100 14 188 2.0 4.5 3.2 3.3 248 chrX 12953852 intron hec - chrX 12953976 intron hec - chrX 12954100 intron hec - chrX_14_12950001 chrX_12950001 RAL-306_125b 3622 chrX 12971661 12971691 chrX 12971765 12971780 8 116 7.0 5.5 6.2 1.1 119 chrX 12971661 intron,exon CR43636 -,CG15721 + chrX 12971720 intron,exon CR43636 -,CG15721 + chrX 12971780 intron,exon CR43636 -,CG15721 + chrX_8_12970001 chrX_12970001 RAL-306_125b 3623 chrX 12977022 12977061 chrX 12977148 12977187 6 126 1.0 9.0 5.0 1.0 165 chrX 12977022 intergenic not near genes chrX 12977104 intergenic not near genes chrX 12977187 intergenic not near genes chrX_6_12975001 chrX_12975001 RAL-306_125b 3624 chrX 13099069 13099138 chrX 13099205 13099281 11 139 0.0 3.0 1.5 4.4 212 chrX 13099069 intron CG43313 - chrX 13099175 intron CG43313 - chrX 13099281 intron CG43313 - chrX_11_13095001 chrX_13095001 RAL-306_125b 3625 chrX 13146553 13146629 chrX 13146691 13146767 22 138 4.5 10.5 7.5 2.6 214 chrX 13146553 intron CG32645 + chrX 13146660 intron CG32645 + chrX 13146767 intron CG32645 + chrX_22_13145001 chrX_13145001 RAL-306_125b 3626 chrX 13172317 13172377 chrX 13172434 13172503 13 120 3.0 6.0 4.5 2.4 186 chrX 13172317 exon CG34411 - chrX 13172410 intron CG34411 - chrX 13172503 intron CG34411 - chrX_13_13170001 chrX_13170001 RAL-306_125b 3627 chrX 13235855 13235921 chrX 13235984 13236050 14 129 5.5 4.5 5.0 2.3 195 chrX 13235855 intron mew - chrX 13235952 intron,3` UTR mew -,CG32639 - chrX 13236050 intron,3` UTR mew -,CG32639 - chrX_14_13235001 chrX_13235001 RAL-306_125b 3628 chrX 13236836 13236902 chrX 13236967 13237029 12 130 0.5 8.5 4.5 2.2 193 chrX 13236836 intron mew - chrX 13236932 intron mew - chrX 13237029 intron mew - chrX_12_13235001 chrX_13235001 RAL-306_125b 3629 chrX 13269148 13269199 chrX 13269277 13269305 9 124 5.5 1.0 3.2 2.1 157 chrX 13269148 intron HDAC4 - chrX 13269226 intron HDAC4 - chrX 13269305 intron HDAC4 - chrX_9_13265001 chrX_13265001 RAL-306_125b 3630 chrX 13272119 13272177 chrX 13272254 13272312 24 134 6.0 6.5 6.2 3.3 193 chrX 13272119 intron HDAC4 - chrX 13272216 intron HDAC4 - chrX 13272312 intron HDAC4 - chrX_24_13270001 chrX_13270001 RAL-306_125b 3631 chrX 13278123 13278184 chrX 13278256 13278317 16 133 7.0 4.5 5.8 2.4 194 chrX 13278123 intron HDAC4 - chrX 13278220 intron HDAC4 - chrX 13278317 intron HDAC4 - chrX_16_13275001 chrX_13275001 RAL-306_125b 3632 chrX 13346999 13347042 chrX 13347156 13347199 5 157 0.0 9.0 4.5 0.9 200 chrX 13346999 intergenic not near genes chrX 13347099 intergenic not near genes chrX 13347199 intergenic not near genes chrX_5_13345001 chrX_13345001 RAL-306_125b 3633 chrX 13374796 13374830 chrX 13374926 13374960 14 130 10.0 4.5 7.2 1.7 164 chrX 13374796 intron CG1640 + chrX 13374878 intron CG1640 + chrX 13374960 intron CG1640 + chrX_14_13370001 chrX_13370001 RAL-306_125b 3634 chrX 13374831 13374869 chrX 13374916 13374969 11 113 5.0 7.5 6.2 1.5 138 chrX 13374831 intron CG1640 + chrX 13374900 intron CG1640 + chrX 13374969 intron CG1640 + chrX_11_13370001 chrX_13370001 RAL-306_125b 3635 chrX 13401437 13401509 chrX 13401839 13401911 jockey 16 401 3.5 5.0 4.2 3.1 474 chrX 13401437 intergenic CG1673 +,CG12725 - chrX 13401674 intergenic CG12725 -,CG1673 + chrX 13401911 3` UTR CG12725 - chrX_16_13400001 chrX_13400001 RAL-306_125b 3636 chrX 13421446 13421466 chrX 13421579 13421600 6 133 0.0 7.0 3.5 1.3 154 chrX 13421446 intergenic Set2 + chrX 13421523 intergenic Set2 + chrX 13421600 intergenic not near genes chrX_6_13420001 chrX_13420001 RAL-306_125b 3637 chrX 13429416 13429483 chrX 13430615 13430682 jockey 12 1198 0.0 7.5 3.8 2.5 1266 chrX 13429416 intergenic not near genes chrX 13430049 intergenic not near genes chrX 13430682 intergenic not near genes chrX_12_13430001 chrX_13430001 RAL-306_125b 3638 chrX 13435330 13435405 chrX 13435479 13435541 21 148 7.5 5.0 6.2 2.9 211 chrX 13435330 intergenic not near genes chrX 13435436 intergenic not near genes chrX 13435541 intergenic not near genes chrX_21_13435001 chrX_13435001 RAL-306_125b 3639 chrX 13442120 13442125 chrX 13442260 13442266 4 141 1.5 11.0 6.2 0.6 146 chrX 13442120 intergenic not near genes chrX 13442193 intergenic not near genes chrX 13442266 intergenic not near genes chrX_4_13440001 chrX_13440001 RAL-306_125b 3640 chrX 13442127 13442160 chrX 13442249 13442301 13 138 1.5 9.0 5.2 2.1 174 chrX 13442127 intergenic not near genes chrX 13442214 intergenic not near genes chrX 13442301 intergenic not near genes chrX_13_13440001 chrX_13440001 RAL-306_125b 3641 chrX 13443363 13443392 chrX 13443490 13443519 5 126 15.0 9.0 12.0 0.4 156 chrX 13443363 intergenic not near genes chrX 13443441 intergenic not near genes chrX 13443519 intergenic not near genes chrX_5_13440001 chrX_13440001 RAL-306_125b 3642 chrX 13443395 13443416 chrX 13443489 13443517 4 108 10.5 9.5 10.0 0.4 122 chrX 13443395 intergenic not near genes chrX 13443456 intergenic not near genes chrX 13443517 intergenic not near genes chrX_4_13440001 chrX_13440001 RAL-306_125b 3643 chrX 13463604 13463664 chrX 13469231 13469280 mdg3 18 5626 9.5 7.5 8.5 1.9 5676 chrX 13463604 intron Neto + chrX 13466442 intron Neto + chrX 13469280 intron Neto + chrX_18_13465001 chrX_13465001 RAL-306_125b 3644 chrX 13484780 13484852 chrX 13484927 13484998 17 146 6.0 3.5 4.8 2.9 218 chrX 13484780 intron Neto + chrX 13484889 intron Neto + chrX 13484998 intron Neto + chrX_17_13480001 chrX_13480001 RAL-306_125b 3645 chrX 13791121 13791148 chrX 13791317 13791349 8 200 10.5 0.0 5.2 1.3 228 chrX 13791121 intron inaE + chrX 13791235 intron inaE + chrX 13791349 intron inaE + chrX_8_13790001 chrX_13790001 RAL-306_125b 3646 chrX 13821427 13821464 chrX 13821554 13821591 9 127 3.0 3.0 3.0 2.2 164 chrX 13821427 intron Clic - chrX 13821509 intron Clic - chrX 13821591 intron Clic - chrX_9_13820001 chrX_13820001 RAL-306_125b 3647 chrX 13843351 13843366 chrX 13843469 13843493 4 124 12.0 0.0 6.0 0.6 142 chrX 13843351 intron AMPdeam - chrX 13843422 intron AMPdeam - chrX 13843493 intron AMPdeam - chrX_4_13840001 chrX_13840001 RAL-306_125b 3648 chrX 13934275 13934316 chrX 13934408 13934449 13 132 4.0 12.0 8.0 1.4 174 chrX 13934275 intron mamo - chrX 13934362 intron mamo - chrX 13934449 intron mamo - chrX_13_13930001 chrX_13930001 RAL-306_125b 3649 chrX 13935482 13935521 chrX 13935615 13935654 13 132 7.5 13.5 10.5 1.1 172 chrX 13935482 intron mamo - chrX 13935568 intron mamo - chrX 13935654 intron mamo - chrX_13_13935001 chrX_13935001 RAL-306_125b 3650 chrX 13937929 13938008 chrX 13941250 13941329 I-element 12 3321 2.0 2.5 2.2 3.8 3400 chrX 13937929 intron mamo - chrX 13939629 intron mamo - chrX 13941329 intron mamo - chrX_12_13935001 chrX_13935001 RAL-306_125b 3651 chrX 13943273 13943291 chrX 13943377 13943432 9 135 0.0 6.0 3.0 2.2 159 chrX 13943273 intron mamo - chrX 13943352 intron mamo - chrX 13943432 intron mamo - chrX_9_13940001 chrX_13940001 RAL-306_125b 3652 chrX 14091639 14091648 chrX 14092732 14092741 5 1093 12.0 0.0 6.0 0.7 1102 chrX 14091639 intergenic not near genes chrX 14092190 intergenic not near genes chrX 14092741 intergenic not near genes chrX_5_14090001 chrX_14090001 RAL-306_125b 3653 chrX 14104983 14105001 chrX 14114184 14114202 roo 10 9200 11.0 3.5 7.2 1.2 9219 chrX 14104983 intergenic not near genes chrX 14109592 intergenic not near genes chrX 14114202 5` UTR CR44657 + chrX_10_14105001 chrX_14105001 RAL-306_125b 3654 chrX 14105005 14105046 chrX 14114176 14114216 roo 12 9185 7.0 2.5 4.8 2.1 9211 chrX 14105005 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114216 5` UTR CR44657 + chrX_12_14105001 chrX_14105001 RAL-306_125b 3655 chrX 14131437 14131515 chrX 14131575 14131646 10 127 1.5 2.5 2.0 3.3 209 chrX 14131437 intergenic not near genes chrX 14131542 intergenic not near genes chrX 14131646 intergenic not near genes chrX_10_14130001 chrX_14130001 RAL-306_125b 3656 chrX 14136324 14136339 chrX 14136474 14136489 5 150 1.0 3.0 2.0 1.7 165 chrX 14136324 intergenic not near genes chrX 14136406 intergenic not near genes chrX 14136489 intergenic not near genes chrX_5_14135001 chrX_14135001 RAL-306_125b 3657 chrX 14157550 14157614 chrX 14163257 14163321 297 8 5707 9.0 7.5 8.2 0.9 5771 chrX 14157550 intergenic not near genes chrX 14160436 intergenic not near genes chrX 14163321 intergenic not near genes chrX_8_14160001 chrX_14160001 RAL-306_125b 3658 chrX 14174165 14174229 chrX 14174295 14174359 15 130 6.0 8.0 7.0 1.9 194 chrX 14174165 intergenic not near genes chrX 14174262 intergenic CG1368 + chrX 14174359 intergenic CG1368 + chrX_15_14170001 chrX_14170001 RAL-306_125b 3659 chrX 14188027 14188100 chrX 14188160 14188232 15 131 10.0 5.0 7.5 1.8 205 chrX 14188027 intergenic CG12481 + chrX 14188130 intergenic CG12481 + chrX 14188232 intergenic CG12481 + chrX_15_14185001 chrX_14185001 RAL-306_125b 3660 chrX 14190709 14190773 chrX 14191015 14191078 14 303 0.0 2.5 1.2 6.4 369 chrX 14190709 3` UTR CG11585 + chrX 14190894 intergenic CG11585 +,CG13403 - chrX 14191078 intergenic CG13403 -,CG11585 + chrX_14_14190001 chrX_14190001 RAL-306_125b 3661 chrX 14209419 14209483 chrX 14209560 14209624 14 141 7.5 8.0 7.8 1.6 205 chrX 14209419 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209522 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209624 intron,intron l(1)G0007 +,l(1)G0469 - chrX_14_14205001 chrX_14205001 RAL-306_125b 3662 chrX 14216751 14216785 chrX 14216886 14216920 14 135 12.5 3.5 8.0 1.6 169 chrX 14216751 intron l(1)G0007 + chrX 14216836 intron l(1)G0007 + chrX 14216920 intron l(1)G0007 + chrX_14_14215001 chrX_14215001 RAL-306_125b 3663 chrX 14318328 14318372 chrX 14318478 14318522 8 149 5.5 9.5 7.5 0.9 194 chrX 14318328 intergenic not near genes chrX 14318425 intergenic not near genes chrX 14318522 intergenic not near genes chrX_8_14315001 chrX_14315001 RAL-306_125b 3664 chrX 14381364 14381411 chrX 14381568 14381615 10 203 0.0 3.0 1.5 4.0 251 chrX 14381364 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381490 intron dpr8 + chrX 14381615 intron dpr8 + chrX_10_14380001 chrX_14380001 RAL-306_125b 3665 chrX 14383924 14383937 chrX 14384048 14384059 6 126 8.0 10.5 9.2 0.6 135 chrX 14383924 intron dpr8 + chrX 14383992 intron dpr8 + chrX 14384059 intron dpr8 + chrX_6_14380001 chrX_14380001 RAL-306_125b 3666 chrX 14384393 14384438 chrX 14384521 14384554 13 126 5.0 7.5 6.2 1.8 161 chrX 14384393 intron dpr8 + chrX 14384474 intron dpr8 + chrX 14384554 intron dpr8 + chrX_13_14380001 chrX_14380001 RAL-306_125b 3667 chrX 14395056 14395123 chrX 14395206 14395272 12 147 4.5 1.5 3.0 3.0 216 chrX 14395056 intron dpr8 + chrX 14395164 intron dpr8 + chrX 14395272 intron dpr8 + chrX_12_14395001 chrX_14395001 RAL-306_125b 3668 chrX 14411216 14411287 chrX 14411344 14411410 18 128 4.0 4.0 4.0 3.6 194 chrX 14411216 intron dpr8 + chrX 14411313 intron dpr8 + chrX 14411410 intron dpr8 + chrX_18_14410001 chrX_14410001 RAL-306_125b 3669 chrX 14416268 14416326 chrX 14421085 14421143 F-element 13 4814 9.5 9.5 9.5 1.2 4875 chrX 14416268 intron dpr8 + chrX 14418706 intron dpr8 + chrX 14421143 intron dpr8 + chrX_13_14415001 chrX_14415001 RAL-306_125b 3670 chrX 14484919 14484995 chrX 14485058 14485123 19 138 0.0 5.5 2.8 5.0 204 chrX 14484919 intergenic not near genes chrX 14485021 intergenic not near genes chrX 14485123 intergenic not near genes chrX_19_14485001 chrX_14485001 RAL-306_125b 3671 chrX 14597727 14597752 chrX 14597832 14597879 12 125 1.0 6.5 3.8 2.5 152 chrX 14597727 intron CG9413 - chrX 14597803 intron CG9413 - chrX 14597879 intron CG9413 - chrX_12_14595001 chrX_14595001 RAL-306_125b 3672 chrX 14636422 14636481 chrX 14641913 14641972 I-element 13 5490 5.5 10.0 7.8 1.5 5550 chrX 14636422 intron NetA - chrX 14639197 intron NetA - chrX 14641972 intron NetA - chrX_13_14635001 chrX_14635001 RAL-306_125b 3673 chrX 14767909 14767953 chrX 14768024 14768083 12 128 4.5 5.5 5.0 2.0 174 chrX 14767909 intergenic not near genes chrX 14767996 intergenic not near genes chrX 14768083 intergenic not near genes chrX_12_14765001 chrX_14765001 RAL-306_125b 3674 chrX 14774933 14775006 chrX 14775060 14775134 12 125 5.5 6.5 6.0 1.7 201 chrX 14774933 intergenic CG5334 + chrX 14775034 intergenic CG5334 + chrX 14775134 intergenic CG5334 + chrX_12_14775001 chrX_14775001 RAL-306_125b 3675 chrX 14777996 14778048 chrX 14782843 14782895 Doc 20 4847 9.0 13.5 11.2 1.6 4899 chrX 14777996 intergenic CG5347 + chrX 14780446 intergenic not near genes chrX 14782895 intergenic Ag5r2 - chrX_20_14780001 chrX_14780001 RAL-306_125b 3676 chrX 14806715 14806784 chrX 14806845 14806924 11 135 2.5 0.0 1.2 5.0 209 chrX 14806715 intron rut - chrX 14806820 intron rut - chrX 14806924 intron rut - chrX_11_14805001 chrX_14805001 RAL-306_125b 3677 chrX 14818717 14818790 chrX 14823971 14824044 copia 16 5253 5.0 3.5 4.2 3.1 5327 chrX 14818717 intron rut - chrX 14821380 intron rut - chrX 14824044 intron rut - chrX_16_14820001 chrX_14820001 RAL-306_125b 3678 chrX 14917807 14917885 chrX 14917978 14918010 15 158 24.5 32.0 28.2 0.5 203 chrX 14917807 intron,exon Flo2 +,Eo - chrX 14917908 intron,exon Flo2 +,Eo - chrX 14918010 intron,exon Flo2 +,Eo - chrX_15_14915001 chrX_14915001 RAL-306_125b 3679 chrX 14936797 14936885 chrX 14946114 14946192 roo 20 9312 1.0 5.0 3.0 5.0 9395 chrX 14936797 intron pdgy - chrX 14941494 intron pdgy - chrX 14946192 intron pdgy - chrX_20_14940001 chrX_14940001 RAL-306_125b 3680 chrX 14968039 14968094 chrX 14968158 14968223 8 123 0.0 4.0 2.0 2.7 184 chrX 14968039 intron eag + chrX 14968131 intron eag + chrX 14968223 intron eag + chrX_8_14965001 chrX_14965001 RAL-306_125b 3681 chrX 15029462 15029510 chrX 15029593 15029641 9 131 2.5 7.0 4.8 1.6 179 chrX 15029462 intron,intron hiw -,be + chrX 15029552 intron,intron hiw -,be + chrX 15029641 intron,intron hiw -,be + chrX_9_15025001 chrX_15025001 RAL-306_125b 3682 chrX 15059127 15059204 chrX 15059283 15059348 8 154 1.5 5.0 3.2 1.9 221 chrX 15059127 exon hiw - chrX 15059238 intron hiw - chrX 15059348 intron hiw - chrX_8_15055001 chrX_15055001 RAL-306_125b 3683 chrX 15062478 15062508 chrX 15062626 15062656 6 148 9.0 5.5 7.2 0.7 178 chrX 15062478 intron hiw - chrX 15062567 intron hiw - chrX 15062656 intron hiw - chrX_6_15060001 chrX_15060001 RAL-306_125b 3684 chrX 15070131 15070310 chrX 15070274 15070456 20 144 0.0 0.5 0.2 16.7 325 chrX 15070131 3` UTR Lsd-2 - chrX 15070294 3` UTR Lsd-2 - chrX 15070456 3` UTR Lsd-2 - chrX_20_15070001 chrX_15070001 RAL-306_125b 3685 chrX 15228453 15228525 chrX 15228749 15228821 24 294 4.5 3.5 4.0 4.8 368 chrX 15228453 intergenic CG9101 - chrX 15228637 intergenic CG9101 - chrX 15228821 3` UTR CG9101 - chrX_24_15225001 chrX_15225001 RAL-306_125b 3686 chrX 15265831 15265867 chrX 15265964 15265991 9 129 6.5 2.5 4.5 1.6 160 chrX 15265831 intergenic not near genes chrX 15265911 intergenic not near genes chrX 15265991 intergenic not near genes chrX_9_15265001 chrX_15265001 RAL-306_125b 3687 chrX 15273696 15273730 chrX 15274877 15274896 1360 9 1200 7.0 2.0 4.5 1.6 1200 chrX 15273696 intergenic not near genes chrX 15274296 intergenic not near genes chrX 15274896 intergenic not near genes chrX_9_15270001 chrX_15270001 RAL-306_125b 3688 chrX 15277585 15277660 chrX 15277720 15277795 17 132 7.0 6.0 6.5 2.3 210 chrX 15277585 intergenic not near genes chrX 15277690 intergenic not near genes chrX 15277795 intergenic not near genes chrX_17_15275001 chrX_15275001 RAL-306_125b 3689 chrX 15326686 15326718 chrX 15326934 15326966 I-element 7 248 2.0 6.0 4.0 1.4 280 chrX 15326686 3` UTR Top1 + chrX 15326826 3` UTR Top1 + chrX 15326966 3` UTR Top1 + chrX_7_15325001 chrX_15325001 RAL-306_125b 3690 chrX 15392820 15392842 chrX 15392946 15392975 5 126 2.5 5.0 3.8 1.0 155 chrX 15392820 exon Cngl - chrX 15392898 exon Cngl - chrX 15392975 exon Cngl - chrX_5_15390001 chrX_15390001 RAL-306_125b 3691 chrX 15413014 15413070 chrX 15417366 15417422 Juan 23 4349 4.0 8.5 6.2 3.2 4408 chrX 15413014 intron Cngl - chrX 15415218 intron Cngl - chrX 15417422 intron Cngl - chrX_23_15415001 chrX_15415001 RAL-306_125b 3692 chrX 15519764 15519817 chrX 15519892 15519945 18 125 7.0 4.0 5.5 2.8 181 chrX 15519764 intron Ac13E - chrX 15519854 intron Ac13E - chrX 15519945 exon Ac13E - chrX_18_15515001 chrX_15515001 RAL-306_125b 3693 chrX 15529221 15529290 chrX 15529352 15529421 21 128 8.0 8.5 8.2 2.3 200 chrX 15529221 intron Ac13E - chrX 15529321 intron Ac13E - chrX 15529421 intron Ac13E - chrX_21_15525001 chrX_15525001 RAL-306_125b 3694 chrX 15536662 15536701 chrX 15536779 15536828 10 121 7.5 11.5 9.5 1.0 166 chrX 15536662 intron Ac13E - chrX 15536745 intron Ac13E - chrX 15536828 intron Ac13E - chrX_10_15535001 chrX_15535001 RAL-306_125b 3695 chrX 15591194 15591201 chrX 15591320 15591327 5 126 3.0 10.5 6.8 0.6 133 chrX 15591194 intron CG9220 - chrX 15591260 intron CG9220 - chrX 15591327 intron CG9220 - chrX_5_15590001 chrX_15590001 RAL-306_125b 3696 chrX 15623454 15623469 chrX 15623585 15623595 4 130 17.0 10.5 13.8 0.3 141 chrX 15623454 intron sog - chrX 15623524 intron sog - chrX 15623595 intron sog - chrX_4_15620001 chrX_15620001 RAL-306_125b 3697 chrX 15677984 15678065 chrX 15678112 15678192 23 122 9.5 7.0 8.2 2.5 208 chrX 15677984 intergenic CG12708 + chrX 15678088 intergenic CG12708 + chrX 15678192 intergenic CG12708 + chrX_23_15675001 chrX_15675001 RAL-306_125b 3698 chrX 15935002 15935071 chrX 15935141 15935198 19 139 3.5 4.5 4.0 3.8 196 chrX 15935002 intron Stim - chrX 15935100 intron Stim - chrX 15935198 intron Stim - chrX_19_15935001 chrX_15935001 RAL-306_125b 3699 chrX 15959499 15959563 chrX 15959637 15959661 15 135 7.5 5.0 6.2 2.1 162 chrX 15959499 intron mmd - chrX 15959580 intron mmd - chrX 15959661 intron mmd - chrX_15_15955001 chrX_15955001 RAL-306_125b 3700 chrX 16074104 16074163 chrX 16074490 16074549 11 386 0.0 6.5 3.2 2.6 445 chrX 16074104 intergenic not near genes chrX 16074326 intergenic Tob - chrX 16074549 intergenic Tob - chrX_11_16070001 chrX_16070001 RAL-306_125b 3701 chrX 16080232 16080272 chrX 16080361 16080397 11 128 8.5 10.0 9.2 1.1 165 chrX 16080232 exon Tob - chrX 16080314 exon Tob - chrX 16080397 exon Tob - chrX_11_16080001 chrX_16080001 RAL-306_125b 3702 chrX 16080280 16080297 chrX 16080358 16080427 7 116 6.0 9.0 7.5 0.8 147 chrX 16080280 exon Tob - chrX 16080354 exon Tob - chrX 16080427 exon Tob - chrX_7_16080001 chrX_16080001 RAL-306_125b 3703 chrX 16100511 16100572 chrX 16100640 16100702 8 128 7.5 5.0 6.2 1.1 191 chrX 16100511 intron,intron CG42353 -,CG42354 - chrX 16100606 intron,intron CG42353 -,CG42354 - chrX 16100702 intron,intron CG42353 -,CG42354 - chrX_8_16100001 chrX_16100001 RAL-306_125b 3704 chrX 16222737 16222802 chrX 16231137 16231202 roo 28 8400 6.5 9.0 7.8 3.2 8465 chrX 16222737 intergenic not near genes chrX 16226970 intergenic not near genes chrX 16231202 intergenic not near genes chrX_28_16225001 chrX_16225001 RAL-306_125b 3705 chrX 16253825 16253855 chrX 16253962 16253990 10 136 0.0 10.0 5.0 1.7 165 chrX 16253825 intergenic snRNA:U5:14B - chrX 16253908 intergenic snRNA:U5:14B - chrX 16253990 intergenic snRNA:U5:14B - chrX_10_16250001 chrX_16250001 RAL-306_125b 3706 chrX 16295501 16295555 chrX 16295635 16295683 12 130 5.0 0.5 2.8 3.2 182 chrX 16295501 intron CG9911 - chrX 16295592 intron CG9911 - chrX 16295683 intron CG9911 - chrX_12_16295001 chrX_16295001 RAL-306_125b 3707 chrX 16329368 16329441 chrX 16329515 16329574 9 137 0.0 1.5 0.8 5.0 206 chrX 16329368 exon CG9919 - chrX 16329471 intron CG9919 - chrX 16329574 exon CG9919 - chrX_9_16325001 chrX_16325001 RAL-306_125b 3708 chrX 16340617 16340697 chrX 16349822 16349858 roo 22 9202 2.5 8.0 5.2 3.5 9241 chrX 16340617 3` UTR Dsp1 + chrX 16345238 intergenic not near genes chrX 16349858 intergenic sl + chrX_22_16345001 chrX_16345001 RAL-306_125b 3709 chrX 16492604 16492670 chrX 16498231 16498297 mdg3 12 5623 6.5 4.0 5.2 1.9 5693 chrX 16492604 intron para - chrX 16495450 intron para - chrX 16498297 exon para - chrX_12_16495001 chrX_16495001 RAL-306_125b 3710 chrX 16570828 16570903 chrX 16570958 16571033 10 130 8.0 1.0 4.5 1.8 205 chrX 16570828 intron CanA-14F - chrX 16570930 intron CanA-14F - chrX 16571033 intron CanA-14F - chrX_10_16570001 chrX_16570001 RAL-306_125b 3711 chrX 16650882 16650956 chrX 16651009 16651085 9 128 9.0 4.5 6.8 1.2 203 chrX 16650882 intergenic CG32573 +,CG42512 + chrX 16650984 intergenic CG32573 +,CG42512 + chrX 16651085 intergenic CG32573 +,CG42512 + chrX_9_16650001 chrX_16650001 RAL-306_125b 3712 chrX 16689581 16689634 chrX 16689717 16689755 12 129 8.0 4.0 6.0 1.7 174 chrX 16689581 intron Sep4 - chrX 16689668 intron Sep4 - chrX 16689755 intron Sep4 - chrX_12_16685001 chrX_16685001 RAL-306_125b 3713 chrX 16689635 16689645 chrX 16689713 16689776 6 121 6.5 4.0 5.2 1.0 141 chrX 16689635 intron Sep4 - chrX 16689706 intron Sep4 - chrX 16689776 intron Sep4 - chrX_6_16685001 chrX_16685001 RAL-306_125b 3714 chrX 16690103 16690122 chrX 16690238 16690257 6 135 4.5 3.0 3.8 1.2 154 chrX 16690103 intron Sep4 - chrX 16690180 intron Sep4 - chrX 16690257 intron Sep4 - chrX_6_16690001 chrX_16690001 RAL-306_125b 3715 chrX 16690404 16690471 chrX 16690533 16690555 16 117 3.5 5.5 4.5 2.9 151 chrX 16690404 intron Sep4 - chrX 16690480 intron Sep4 - chrX 16690555 intron Sep4 - chrX_16_16690001 chrX_16690001 RAL-306_125b 3716 chrX 16764694 16764719 chrX 16764821 16764831 5 122 7.0 0.0 3.5 1.1 137 chrX 16764694 intron if - chrX 16764762 intron if - chrX 16764831 intron if - chrX_5_16760001 chrX_16760001 RAL-306_125b 3717 chrX 16867753 16867770 chrX 16867881 16867898 7 128 5.0 4.5 4.8 1.2 145 chrX 16867753 intron CG13003 - chrX 16867826 intron CG13003 - chrX 16867898 intron CG13003 - chrX_7_16865001 chrX_16865001 RAL-306_125b 3718 chrX 16891315 16891357 chrX 16891452 16891494 14 137 7.0 7.0 7.0 1.8 179 chrX 16891315 intergenic not near genes chrX 16891404 intergenic not near genes chrX 16891494 intergenic not near genes chrX_14_16890001 chrX_16890001 RAL-306_125b 3719 chrX 16935955 16936020 chrX 16936423 16936488 jockey 11 466 9.5 4.5 7.0 1.4 533 chrX 16935955 intron CG4928 + chrX 16936222 intron CG4928 + chrX 16936488 intron CG4928 + chrX_11_16935001 chrX_16935001 RAL-306_125b 3720 chrX 1053120 1053123 chrX 16983073 16983076 8 15929953 9.5 18.5 14.0 0.5 15929956 chrX 1053120 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-306_125b 3721 chrX 17057901 17057947 chrX 17058192 17058238 pogo 9 291 5.5 6.0 5.8 1.3 337 chrX 17057901 intron CG45002 - chrX 17058070 intron CG45002 - chrX 17058238 intron CG45002 - chrX_9_17055001 chrX_17055001 RAL-306_125b 3722 chrX 17063145 17063204 chrX 17063282 17063341 23 137 8.5 9.5 9.0 2.3 196 chrX 17063145 intron CG45002 - chrX 17063243 intron CG45002 - chrX 17063341 intron CG45002 - chrX_23_17060001 chrX_17060001 RAL-306_125b 3723 chrX 17122599 17122669 chrX 17122740 17122780 8 137 4.5 5.0 4.8 1.4 181 chrX 17122599 intron CG5004 + chrX 17122690 intron CG5004 + chrX 17122780 intron CG5004 + chrX_8_17120001 chrX_17120001 RAL-306_125b 3724 chrX 17195161 17195221 chrX 17200297 17200356 flea 21 5134 10.0 7.5 8.8 2.1 5195 chrX 17195161 3` UTR baz + chrX 17197758 3` UTR baz + chrX 17200356 3` UTR baz + chrX_21_17195001 chrX_17195001 RAL-306_125b 3725 chrX 17205798 17205858 chrX 17205938 17205998 15 140 5.0 9.5 7.2 1.8 200 chrX 17205798 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205998 intergenic CG32564 + chrX_15_17205001 chrX_17205001 RAL-306_125b 3726 chrX 17211440 17211454 chrX 17212093 17212107 6 654 22.5 39.0 30.8 0.2 667 chrX 17211440 intergenic not near genes chrX 17211774 intergenic not near genes chrX 17212107 intergenic CG18258 + chrX_6_17210001 chrX_17210001 RAL-306_125b 3727 chrX 17211438 17211512 chrX 17212112 17212165 9 658 22.5 36.0 29.2 0.3 727 chrX 17211438 intergenic not near genes chrX 17211802 intergenic not near genes chrX 17212165 intergenic CG18258 + chrX_9_17210001 chrX_17210001 RAL-306_125b 3728 chrX 17237482 17237535 chrX 17237616 17237669 5 132 8.0 8.5 8.2 0.5 187 chrX 17237482 intron f + chrX 17237576 intron f + chrX 17237669 intron f + chrX_5_17235001 chrX_17235001 RAL-306_125b 3729 chrX 17293059 17293084 chrX 17293365 17293390 5 306 11.0 6.5 8.8 0.5 331 chrX 17293059 intron,intron CG5445 +,Fim - chrX 17293224 intron,intron CG5445 +,Fim - chrX 17293390 intron,intron CG5445 +,Fim - chrX_5_17290001 chrX_17290001 RAL-306_125b 3730 chrX 17303559 17303601 chrX 17303685 17303727 17 126 10.0 14.5 12.2 1.3 168 chrX 17303559 intron CG5445 + chrX 17303643 intron CG5445 + chrX 17303727 intron CG5445 + chrX_17_17300001 chrX_17300001 RAL-306_125b 3731 chrX 17352546 17352615 chrX 17352690 17352768 15 146 0.5 6.0 3.2 3.6 222 chrX 17352546 intergenic not near genes chrX 17352657 intergenic not near genes chrX 17352768 intergenic not near genes chrX_15_17350001 chrX_17350001 RAL-306_125b 3732 chrX 17357496 17357517 chrX 17357636 17357655 4 142 5.0 4.5 4.8 0.7 159 chrX 17357496 intergenic not near genes chrX 17357576 intergenic not near genes chrX 17357655 intergenic not near genes chrX_4_17355001 chrX_17355001 RAL-306_125b 3733 chrX 17431310 17431330 chrX 17431701 17431721 jockey 4 388 12.5 4.5 8.5 0.4 411 chrX 17431310 intron CG12994 - chrX 17431516 intron CG12994 - chrX 17431721 intron CG12994 - chrX_4_17430001 chrX_17430001 RAL-306_125b 3734 chrX 17443072 17443104 chrX 17443246 17443278 7 173 8.0 0.5 4.2 1.3 206 chrX 17443072 intron CG12994 - chrX 17443175 intron CG12994 - chrX 17443278 intron CG12994 - chrX_7_17440001 chrX_17440001 RAL-306_125b 3735 chrX 17476422 17476490 chrX 17476549 17476577 11 119 9.0 9.5 9.2 1.1 155 chrX 17476422 intron CG43658 - chrX 17476500 intron CG43658 - chrX 17476577 intron CG43658 - chrX_11_17475001 chrX_17475001 RAL-306_125b 3736 chrX 17680875 17680903 chrX 17680991 17681029 8 122 4.0 10.5 7.2 1.0 154 chrX 17680875 intron chas - chrX 17680952 intron chas - chrX 17681029 intron chas - chrX_8_17680001 chrX_17680001 RAL-306_125b 3737 chrX 17685410 17685473 chrX 17685543 17685606 13 132 0.0 6.5 3.2 3.1 196 chrX 17685410 intron chas - chrX 17685508 intron chas - chrX 17685606 intron chas - chrX_13_17685001 chrX_17685001 RAL-306_125b 3738 chrX 17711326 17711376 chrX 17711462 17711513 9 136 8.5 8.0 8.2 1.0 187 chrX 17711326 intron CG42684 + chrX 17711420 intron CG42684 + chrX 17711513 intron CG42684 + chrX_9_17710001 chrX_17710001 RAL-306_125b 3739 chrX 17716550 17716598 chrX 17716687 17716735 10 136 1.5 5.0 3.2 2.4 185 chrX 17716550 intron CG42684 + chrX 17716642 intron CG42684 + chrX 17716735 intron CG42684 + chrX_10_17715001 chrX_17715001 RAL-306_125b 3740 chrX 17726421 17726429 chrX 17726549 17726558 6 129 7.0 7.0 7.0 0.8 137 chrX 17726421 intron CG42684 + chrX 17726490 intron CG42684 + chrX 17726558 intron CG42684 + chrX_6_17725001 chrX_17725001 RAL-306_125b 3741 chrX 17726433 17726464 chrX 17726542 17726593 8 126 2.5 5.0 3.8 1.7 160 chrX 17726433 intron CG42684 + chrX 17726513 intron CG42684 + chrX 17726593 intron CG42684 + chrX_8_17725001 chrX_17725001 RAL-306_125b 3742 chrX 17740382 17740398 chrX 17740470 17740479 8 112 4.5 5.5 5.0 1.3 97 chrX 17740382 intron CG42684 + chrX 17740430 intron CG42684 + chrX 17740479 intron CG42684 + chrX_8_17740001 chrX_17740001 RAL-306_125b 3743 chrX 17766310 17766335 chrX 17766458 17766483 5 143 5.5 5.0 5.2 0.8 173 chrX 17766310 intergenic not near genes chrX 17766396 intergenic not near genes chrX 17766483 intergenic not near genes chrX_5_17765001 chrX_17765001 RAL-306_125b 3744 chrX 17766338 17766367 chrX 17766456 17766512 9 136 4.5 5.0 4.8 1.6 174 chrX 17766338 intergenic not near genes chrX 17766425 intergenic not near genes chrX 17766512 intergenic not near genes chrX_9_17765001 chrX_17765001 RAL-306_125b 3745 chrX 17792923 17792938 chrX 17796265 17796286 flea 7 3343 9.0 5.5 7.2 0.9 3363 chrX 17792923 intron OdsH + chrX 17794604 intron OdsH + chrX 17796286 intron OdsH + chrX_7_17790001 chrX_17790001 RAL-306_125b 3746 chrX 17792939 17792968 chrX 17796257 17796316 flea 8 3344 6.5 5.0 5.8 1.2 3377 chrX 17792939 intron OdsH + chrX 17794628 intron OdsH + chrX 17796316 intron OdsH + chrX_8_17790001 chrX_17790001 RAL-306_125b 3747 chrX 17854865 17854935 chrX 17854998 17855068 26 132 5.0 4.0 4.5 4.7 203 chrX 17854865 intron CG32557 - chrX 17854966 intron CG32557 - chrX 17855068 intron CG32557 - chrX_26_17850001 chrX_17850001 RAL-306_125b 3748 chrX 17867003 17867066 chrX 17867129 17867151 4 116 8.5 9.5 9.0 0.4 148 chrX 17867003 intron mnb - chrX 17867077 intron mnb - chrX 17867151 intron mnb - chrX_4_17865001 chrX_17865001 RAL-306_125b 3749 chrX 17911807 17911872 chrX 17911943 17912010 18 137 2.0 6.0 4.0 3.6 203 chrX 17911807 intron CG6847 + chrX 17911908 intron CG6847 + chrX 17912010 intron CG6847 + chrX_18_17910001 chrX_17910001 RAL-306_125b 3750 chrX 18029151 18029183 chrX 18029282 18029314 7 131 4.5 0.5 2.5 2.0 163 chrX 18029151 intron Sh - chrX 18029232 intron Sh - chrX 18029314 intron Sh - chrX_7_18025001 chrX_18025001 RAL-306_125b 3751 chrX 18122774 18122845 chrX 18122900 18122971 15 123 8.0 6.5 7.2 1.8 197 chrX 18122774 5` UTR CR45606 + chrX 18122872 5` UTR CR45606 + chrX 18122971 intergenic CR45606 + chrX_15_18120001 chrX_18120001 RAL-306_125b 3752 chrX 18141038 18141092 chrX 18141164 18141218 17 126 0.5 11.0 5.8 2.5 180 chrX 18141038 intergenic not near genes chrX 18141128 intergenic not near genes chrX 18141218 intergenic not near genes chrX_17_18140001 chrX_18140001 RAL-306_125b 3753 chrX 18148590 18148624 chrX 18148743 18148777 14 153 4.0 2.0 3.0 3.5 187 chrX 18148590 intergenic not near genes chrX 18148684 intergenic not near genes chrX 18148777 intergenic not near genes chrX_14_18145001 chrX_18145001 RAL-306_125b 3754 chrX 18194027 18194089 chrX 18194612 18194674 BS 17 583 6.0 9.0 7.5 2.0 647 chrX 18194027 intron Frq2 + chrX 18194350 intron Frq2 + chrX 18194674 intron Frq2 + chrX_17_18190001 chrX_18190001 RAL-306_125b 3755 chrX 18217990 18218061 chrX 18218156 18218228 15 167 10.0 5.5 7.8 1.7 238 chrX 18217990 intron CG33639 - chrX 18218109 intron CG33639 - chrX 18218228 intron CG33639 - chrX_15_18215001 chrX_18215001 RAL-306_125b 3756 chrX 18320433 18320491 chrX 18320627 18320669 10 188 0.0 6.0 3.0 2.5 236 chrX 18320433 intron CG6023 - chrX 18320551 intron CG6023 - chrX 18320669 intron CG6023 - chrX_10_18320001 chrX_18320001 RAL-306_125b 3757 chrX 18427336 18427409 chrX 18427797 18427870 20 457 8.0 6.5 7.2 2.4 534 chrX 18427336 intergenic CG42323 + chrX 18427603 intergenic not near genes chrX 18427870 intergenic not near genes chrX_20_18425001 chrX_18425001 RAL-306_125b 3758 chrX 18429453 18429514 chrX 18434814 18434875 Transpac 20 5359 7.5 6.0 6.8 2.6 5422 chrX 18429453 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434875 intergenic not near genes chrX_20_18430001 chrX_18430001 RAL-306_125b 3759 chrX 18441012 18441031 chrX 18441100 18441174 4 128 6.5 5.0 5.8 0.6 162 chrX 18441012 intergenic CG32548 - chrX 18441093 intergenic not near genes chrX 18441174 intergenic not near genes chrX_4_18440001 chrX_18440001 RAL-306_125b 3760 chrX 18453569 18453616 chrX 18453695 18453742 12 123 5.0 7.0 6.0 1.7 173 chrX 18453569 intron CG32547 - chrX 18453656 intron CG32547 - chrX 18453742 intron CG32547 - chrX_12_18450001 chrX_18450001 RAL-306_125b 3761 chrX 18474266 18474332 chrX 18474399 18474429 9 129 7.5 0.5 4.0 1.8 163 chrX 18474266 intron CG32547 - chrX 18474348 intron CG32547 - chrX 18474429 intron CG32547 - chrX_9_18470001 chrX_18470001 RAL-306_125b 3762 chrX 18479849 18479858 chrX 18479985 18479994 4 136 4.0 2.5 3.2 1.0 145 chrX 18479849 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479922 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479994 3` UTR Hayan - chrX_4_18475001 chrX_18475001 RAL-306_125b 3763 chrX 18489999 18490050 chrX 18490199 18490254 10 196 6.5 4.0 5.2 1.6 255 chrX 18489999 intergenic CG15046 - chrX 18490126 intergenic not near genes chrX 18490254 intergenic not near genes chrX_10_18490001 chrX_18490001 RAL-306_125b 3764 chrX 18555340 18555366 chrX 18556911 18556937 transib2 11 1570 4.0 7.0 5.5 1.7 1597 chrX 18555340 intron Bx + chrX 18556138 intron Bx + chrX 18556937 intron Bx + chrX_11_18555001 chrX_18555001 RAL-306_125b 3765 chrX 18555373 18555404 chrX 18556907 18556976 transib2 10 1566 2.0 7.0 4.5 1.8 1603 chrX 18555373 intron Bx + chrX 18556174 intron Bx + chrX 18556976 intron Bx + chrX_10_18555001 chrX_18555001 RAL-306_125b 3766 chrX 18574754 18574806 chrX 18574884 18574936 6 129 1.0 6.0 3.5 1.3 182 chrX 18574754 intergenic not near genes chrX 18574845 intergenic not near genes chrX 18574936 intergenic not near genes chrX_6_18570001 chrX_18570001 RAL-306_125b 3767 chrX 18645001 18645039 chrX 18645123 18645187 13 146 4.5 7.0 5.8 1.9 186 chrX 18645001 intron Rip11 - chrX 18645094 intron Rip11 - chrX 18645187 intron Rip11 - chrX_13_18645001 chrX_18645001 RAL-306_125b 3768 chrX 18698810 18698874 chrX 18698977 18699021 16 165 5.5 5.5 5.5 2.5 211 chrX 18698810 intergenic not near genes chrX 18698916 intergenic not near genes chrX 18699021 intergenic not near genes chrX_16_18695001 chrX_18695001 RAL-306_125b 3769 chrX 18817886 18817950 chrX 18818023 18818079 22 134 8.0 8.0 8.0 2.4 193 chrX 18817886 intron CG42450 + chrX 18817982 intron CG42450 + chrX 18818079 intron CG42450 + chrX_22_18815001 chrX_18815001 RAL-306_125b 3770 chrX 18896478 18896548 chrX 18896639 18896709 8 161 5.0 6.0 5.5 1.2 231 chrX 18896478 3` UTR CG7349 + chrX 18896594 intergenic CG7349 + chrX 18896709 intergenic CG7349 + chrX_8_18895001 chrX_18895001 RAL-306_125b 3771 chrX 18896866 18896932 chrX 18896993 18897039 11 122 4.0 6.0 5.0 1.8 173 chrX 18896866 intergenic CG7349 + chrX 18896952 intergenic CG7349 + chrX 18897039 intergenic CG7349 + chrX_11_18895001 chrX_18895001 RAL-306_125b 3772 chrX 18923643 18923667 chrX 18923769 18923793 5 126 3.5 4.0 3.8 1.0 150 chrX 18923643 intergenic not near genes chrX 18923718 intergenic not near genes chrX 18923793 intergenic not near genes chrX_5_18920001 chrX_18920001 RAL-306_125b 3773 chrX 18957030 18957086 chrX 18965743 18965799 roo 12 8712 8.5 7.0 7.8 1.4 8769 chrX 18957030 intron CG43759 + chrX 18961414 intron CG43759 + chrX 18965799 intron CG43759 + chrX_12_18960001 chrX_18960001 RAL-306_125b 3774 chrX 19019914 19019969 chrX 19020092 19020146 10 177 6.5 5.0 5.8 1.5 232 chrX 19019914 intron CG43759 + chrX 19020030 intron CG43759 + chrX 19020146 intron CG43759 + chrX_10_19020001 chrX_19020001 RAL-306_125b 3775 chrX 19060369 19060431 chrX 19065203 19065265 Doc 12 4834 8.0 11.5 9.8 1.1 4896 chrX 19060369 intron CG14190 + chrX 19062817 intron CG14190 + chrX 19065265 intron CG14190 + chrX_12_19060001 chrX_19060001 RAL-306_125b 3776 chrX 19098721 19098774 chrX 19098849 19098877 12 126 0.0 1.5 0.8 6.7 156 chrX 19098721 intergenic not near genes chrX 19098799 intergenic not near genes chrX 19098877 intergenic not near genes chrX_12_19095001 chrX_19095001 RAL-306_125b 3777 chrX 19119651 19119719 chrX 19119787 19119851 16 133 4.5 0.0 2.2 5.0 200 chrX 19119651 intergenic not near genes chrX 19119751 intergenic not near genes chrX 19119851 intergenic not near genes chrX_16_19115001 chrX_19115001 RAL-306_125b 3778 chrX 19136510 19136566 chrX 19143480 19143536 412 6 6965 10.0 0.0 5.0 1.0 7026 chrX 19136510 intergenic not near genes chrX 19140023 intergenic not near genes chrX 19143536 3` UTR RhoGAP18B - chrX_6_19140001 chrX_19140001 RAL-306_125b 3779 chrX 19170551 19170601 chrX 19170678 19170727 10 126 5.0 3.5 4.2 1.9 176 chrX 19170551 5` UTR Inx5 - chrX 19170639 5` UTR Inx5 - chrX 19170727 5` UTR Inx5 - chrX_10_19170001 chrX_19170001 RAL-306_125b 3780 chrX 19309623 19309676 chrX 19309733 19309806 13 118 3.5 9.5 6.5 1.7 183 chrX 19309623 intergenic not near genes chrX 19309714 intergenic not near genes chrX 19309806 intergenic not near genes chrX_13_19305001 chrX_19305001 RAL-306_125b 3781 chrX 19380114 19380181 chrX 19380405 19380466 pogo 17 290 7.0 7.5 7.2 2.1 352 chrX 19380114 intron kek5 + chrX 19380290 intron kek5 + chrX 19380466 intron kek5 + chrX_17_19380001 chrX_19380001 RAL-306_125b 3782 chrX 19437265 19437281 chrX 19444799 19444838 Idefix 6 7560 6.0 6.0 6.0 0.9 7573 chrX 19437265 intron kek5 + chrX 19441052 intron kek5 + chrX 19444838 intron kek5 + chrX_6_19440001 chrX_19440001 RAL-306_125b 3783 chrX 19472081 19472153 chrX 19472701 19472772 jockey 17 616 5.0 6.0 5.5 2.6 691 chrX 19472081 intergenic kek5 + chrX 19472426 intergenic not near genes chrX 19472772 intergenic not near genes chrX_17_19470001 chrX_19470001 RAL-306_125b 3784 chrX 19500667 19500750 chrX 19500802 19500887 26 136 5.0 7.5 6.2 3.6 220 chrX 19500667 intron,intron CG14200 +,Pfrx + chrX 19500777 intron,intron CG14200 +,Pfrx + chrX 19500887 intron,intron CG14200 +,Pfrx + chrX_26_19500001 chrX_19500001 RAL-306_125b 3785 chrX 19541382 19541430 chrX 19541512 19541560 15 129 9.0 5.0 7.0 1.9 178 chrX 19541382 intron CG32532 - chrX 19541471 intron CG32532 - chrX 19541560 intron CG32532 - chrX_15_19540001 chrX_19540001 RAL-306_125b 3786 chrX 19542091 19542160 chrX 19542239 19542308 31 148 12.5 2.0 7.2 3.8 217 chrX 19542091 intron CG32532 - chrX 19542200 intron CG32532 - chrX 19542308 intron CG32532 - chrX_31_19540001 chrX_19540001 RAL-306_125b 3787 chrX 19593901 19593974 chrX 19594036 19594109 22 132 4.5 5.5 5.0 3.7 208 chrX 19593901 exon CG14205 + chrX 19594005 intron CG14205 + chrX 19594109 exon CG14205 + chrX_22_19590001 chrX_19590001 RAL-306_125b 3788 chrX 19595681 19595742 chrX 19595820 19595881 16 139 7.5 1.5 4.5 2.9 200 chrX 19595681 intergenic CG14205 + chrX 19595781 intergenic CG14205 + chrX 19595881 intergenic CG14205 + chrX_16_19595001 chrX_19595001 RAL-306_125b 3789 chrX 19661980 19662053 chrX 19662253 19662326 35 269 4.5 6.5 5.5 5.4 346 chrX 19661980 intron CG14223 - chrX 19662153 intron CG14223 - chrX 19662326 intron CG14223 - chrX_35_19660001 chrX_19660001 RAL-306_125b 3790 chrX 19756077 19756117 chrX 19756213 19756213 8 130 12.0 2.0 7.0 1.0 136 chrX 19756077 intron Pmp70 + chrX 19756145 intron Pmp70 + chrX 19756213 intron Pmp70 + chrX_8_19755001 chrX_19755001 RAL-306_125b 3791 chrX 19762535 19762572 chrX 19762665 19762702 12 130 13.5 5.0 9.2 1.2 167 chrX 19762535 5` UTR CG12702 - chrX 19762618 5` UTR CG12702 - chrX 19762702 5` UTR CG12702 - chrX_12_19760001 chrX_19760001 RAL-306_125b 3792 chrX 19769471 19769533 chrX 19769589 19769660 4 112 4.5 2.0 3.2 1.0 189 chrX 19769471 exon vfl - chrX 19769566 intron vfl - chrX 19769660 intron vfl - chrX_4_19765001 chrX_19765001 RAL-306_125b 3793 chrX 19797313 19797338 chrX 19804676 19804701 Stalker4 11 7362 11.5 6.5 9.0 1.1 7388 chrX 19797313 intergenic not near genes chrX 19801007 intergenic not near genes chrX 19804701 intergenic not near genes chrX_11_19800001 chrX_19800001 RAL-306_125b 3794 chrX 19881417 19881479 chrX 19881548 19881610 28 130 6.0 6.5 6.2 3.9 193 chrX 19881417 intron Hers + chrX 19881514 intron Hers + chrX 19881610 intron Hers + chrX_28_19880001 chrX_19880001 RAL-306_125b 3795 chrX 19883725 19883784 chrX 19883854 19883904 16 132 6.5 5.0 5.8 2.4 179 chrX 19883725 intron Hers + chrX 19883814 intron Hers + chrX 19883904 intron Hers + chrX_16_19880001 chrX_19880001 RAL-306_125b 3796 chrX 19897345 19897408 chrX 19897472 19897535 20 127 12.0 4.5 8.2 2.2 190 chrX 19897345 intron Hers + chrX 19897440 intron Hers + chrX 19897535 intron Hers + chrX_20_19895001 chrX_19895001 RAL-306_125b 3797 chrX 19971751 19971817 chrX 19971956 19972021 22 204 7.5 7.0 7.2 2.7 270 chrX 19971751 intergenic not near genes chrX 19971886 intergenic not near genes chrX 19972021 intergenic not near genes chrX_22_19970001 chrX_19970001 RAL-306_125b 3798 chrX 19983847 19983878 chrX 19983977 19984003 12 130 0.0 4.5 2.2 3.8 156 chrX 19983847 intergenic not near genes chrX 19983925 intergenic not near genes chrX 19984003 intergenic not near genes chrX_12_19980001 chrX_19980001 RAL-306_125b 3799 chrX 19993419 19993441 chrX 19993549 19993571 5 130 7.5 4.0 5.8 0.7 152 chrX 19993419 intergenic not near genes chrX 19993495 intergenic not near genes chrX 19993571 intergenic not near genes chrX_5_19990001 chrX_19990001 RAL-306_125b 3800 chrX 20041485 20041554 chrX 20041615 20041684 19 129 4.5 8.5 6.5 2.5 199 chrX 20041485 intron Dop2R - chrX 20041584 intron Dop2R - chrX 20041684 intron Dop2R - chrX_19_20040001 chrX_20040001 RAL-306_125b 3801 chrX 20086420 20086477 chrX 20086571 20086581 19 147 4.5 5.5 5.0 3.2 161 chrX 20086420 intergenic not near genes chrX 20086500 intergenic not near genes chrX 20086581 intergenic not near genes chrX_19_20085001 chrX_20085001 RAL-306_125b 3802 chrX 20086760 20086771 chrX 20086895 20086906 5 135 1.5 6.0 3.8 1.0 146 chrX 20086760 intergenic not near genes chrX 20086833 intergenic not near genes chrX 20086906 intergenic not near genes chrX_5_20085001 chrX_20085001 RAL-306_125b 3803 chrX 20090556 20090604 chrX 20090685 20090729 10 118 6.0 8.0 7.0 1.2 173 chrX 20090556 intergenic CR45628 + chrX 20090642 intergenic CR45628 + chrX 20090729 5` UTR CR45628 + chrX_10_20090001 chrX_20090001 RAL-306_125b 3804 chrX 20103909 20103985 chrX 20104049 20104125 16 139 3.5 7.0 5.2 2.6 216 chrX 20103909 intergenic not near genes chrX 20104017 intergenic not near genes chrX 20104125 intergenic not near genes chrX_16_20100001 chrX_20100001 RAL-306_125b 3805 chrX 20125346 20125391 chrX 20125478 20125523 11 132 0.0 7.0 3.5 2.4 177 chrX 20125346 intergenic CG34331 + chrX 20125434 intergenic CG34331 + chrX 20125523 intergenic CG34331 + chrX_11_20125001 chrX_20125001 RAL-306_125b 3806 chrX 20132253 20132308 chrX 20132386 20132441 8 132 6.5 5.0 5.8 1.2 188 chrX 20132253 intergenic not near genes chrX 20132347 intergenic not near genes chrX 20132441 intergenic not near genes chrX_8_20130001 chrX_20130001 RAL-306_125b 3807 chrX 20254175 20254186 chrX 20254316 20254327 4 141 5.5 7.5 6.5 0.5 152 chrX 20254175 3` UTR Rab10 + chrX 20254251 3` UTR Rab10 + chrX 20254327 3` UTR Rab10 + chrX_4_20250001 chrX_20250001 RAL-306_125b 3808 chrX 20271459 20271527 chrX 20271601 20271664 12 141 6.0 0.0 3.0 3.0 205 chrX 20271459 intergenic not near genes chrX 20271562 intergenic not near genes chrX 20271664 intergenic not near genes chrX_12_20270001 chrX_20270001 RAL-306_125b 3809 chrX 20312838 20312909 chrX 20312966 20313037 16 128 7.0 5.5 6.2 2.2 199 chrX 20312838 intron CG1504 - chrX 20312938 intron CG1504 - chrX 20313037 intron CG1504 - chrX_16_20310001 chrX_20310001 RAL-306_125b 3810 chrX 20320251 20320308 chrX 20320378 20320390 12 120 5.5 4.5 5.0 2.0 139 chrX 20320251 intron CG1504 - chrX 20320320 intron CG1504 - chrX 20320390 intron CG1504 - chrX_12_20320001 chrX_20320001 RAL-306_125b 3811 chrX 20357313 20357383 chrX 20357440 20357480 24 123 7.0 4.5 5.8 3.5 167 chrX 20357313 intergenic not near genes chrX 20357396 intergenic not near genes chrX 20357480 intergenic not near genes chrX_24_20355001 chrX_20355001 RAL-306_125b 3812 chrX 20359087 20359160 chrX 20359215 20359227 22 124 6.5 5.0 5.8 3.2 140 chrX 20359087 intergenic not near genes chrX 20359157 intergenic not near genes chrX 20359227 intergenic not near genes chrX_22_20355001 chrX_20355001 RAL-306_125b 3813 chrX 20369279 20369336 chrX 20369413 20369470 14 134 7.5 4.0 5.8 2.1 191 chrX 20369279 intergenic not near genes chrX 20369374 intergenic not near genes chrX 20369470 intergenic not near genes chrX_14_20365001 chrX_20365001 RAL-306_125b 3814 chrX 20415027 20415076 chrX 20415153 20415201 11 126 9.5 2.0 5.8 1.6 174 chrX 20415027 intergenic not near genes chrX 20415114 intergenic not near genes chrX 20415201 intergenic not near genes chrX_11_20415001 chrX_20415001 RAL-306_125b 3815 chrX 20426177 20426234 chrX 20428329 20428404 10 2154 34.0 28.5 31.2 0.3 2227 chrX 20426177 exon cactin + chrX 20427290 intergenic CG11710 -,CG15456 - chrX 20428404 exon CG11710 - chrX_10_20425001 chrX_20425001 RAL-306_125b 3816 chrX 20443160 20443200 chrX 20443286 20443326 8 125 2.5 7.5 5.0 1.3 166 chrX 20443160 exon CG1695 + chrX 20443243 intron CG1695 + chrX 20443326 intron CG1695 + chrX_8_20440001 chrX_20440001 RAL-306_125b 3817 chrX 20456615 20456685 chrX 20456767 20456837 23 152 6.5 9.5 8.0 2.6 222 chrX 20456615 intron CG32506 + chrX 20456726 intron CG32506 + chrX 20456837 intron CG32506 + chrX_23_20455001 chrX_20455001 RAL-306_125b 3818 chrX 20467969 20468037 chrX 20468108 20468169 14 136 5.5 1.0 3.2 3.3 200 chrX 20467969 intron GstT3 + chrX 20468069 intron GstT3 + chrX 20468169 intron GstT3 + chrX_14_20465001 chrX_20465001 RAL-306_125b 3819 chrX 20493879 20493928 chrX 20494088 20494139 15 208 0.0 8.5 4.2 2.9 260 chrX 20493879 intron RhoGAP19D - chrX 20494009 intron RhoGAP19D - chrX 20494139 intron RhoGAP19D - chrX_15_20490001 chrX_20490001 RAL-306_125b 3820 chrX 20499109 20499175 chrX 20499242 20499308 17 131 6.0 6.0 6.0 2.4 199 chrX 20499109 intron RhoGAP19D - chrX 20499208 intron RhoGAP19D - chrX 20499308 intron RhoGAP19D - chrX_17_20495001 chrX_20495001 RAL-306_125b 3821 chrX 20504086 20504150 chrX 20505657 20505719 transib2 14 1569 6.5 5.0 5.8 2.1 1633 chrX 20504086 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505719 intron RhoGAP19D - chrX_14_20500001 chrX_20500001 RAL-306_125b 3822 chrX 20527924 20527931 chrX 20528067 20528074 4 143 2.5 17.0 9.8 0.4 150 chrX 20527924 exon CG42579 + chrX 20527999 3` UTR CG42579 + chrX 20528074 intergenic CG42579 + chrX_4_20525001 chrX_20525001 RAL-306_125b 3823 chrX 20528560 20528625 chrX 20528958 20529023 12 392 6.0 7.5 6.8 1.5 463 chrX 20528560 intergenic not near genes chrX 20528792 intergenic not near genes chrX 20529023 intergenic not near genes chrX_12_20525001 chrX_20525001 RAL-306_125b 3824 chrX 20531645 20531713 chrX 20531785 20531845 10 138 0.0 8.0 4.0 2.0 200 chrX 20531645 intergenic not near genes chrX 20531745 intergenic not near genes chrX 20531845 intergenic not near genes chrX_10_20530001 chrX_20530001 RAL-306_125b 3825 chrX 20534974 20534983 chrX 20535102 20535111 4 127 5.0 0.0 2.5 1.1 137 chrX 20534974 intergenic not near genes chrX 20535042 intergenic not near genes chrX 20535111 intergenic not near genes chrX_4_20535001 chrX_20535001 RAL-306_125b 3826 chrX 20560217 20560284 chrX 20560367 20560434 18 146 3.0 8.5 5.8 2.6 217 chrX 20560217 intron RunxB + chrX 20560326 intron RunxB + chrX 20560434 intron RunxB + chrX_18_20560001 chrX_20560001 RAL-306_125b 3827 chrX 20575120 20575180 chrX 20575240 20575304 20 126 7.5 2.5 5.0 3.3 184 chrX 20575120 intergenic CG42580 + chrX 20575212 intergenic not near genes chrX 20575304 intergenic not near genes chrX_20_20575001 chrX_20575001 RAL-306_125b 3828 chrX 20662261 20662338 chrX 20662394 20662467 14 130 10.0 3.0 6.5 1.9 206 chrX 20662261 intron CG1835 + chrX 20662364 intron CG1835 + chrX 20662467 intron CG1835 + chrX_14_20660001 chrX_20660001 RAL-306_125b 3829 chrX 20708350 20708378 chrX 20708477 20708490 5 122 10.5 4.0 7.2 0.6 140 chrX 20708350 intergenic not near genes chrX 20708420 intergenic not near genes chrX 20708490 intergenic not near genes chrX_5_20705001 chrX_20705001 RAL-306_125b 3830 chrX 20710377 20710426 chrX 20710503 20710554 8 128 5.0 0.5 2.8 2.1 177 chrX 20710377 intergenic not near genes chrX 20710466 intergenic not near genes chrX 20710554 intergenic not near genes chrX_8_20710001 chrX_20710001 RAL-306_125b 3831 chrX 20719163 20719199 chrX 20719546 20719582 12 382 3.0 7.5 5.2 1.9 419 chrX 20719163 intergenic not near genes chrX 20719372 intergenic not near genes chrX 20719582 intergenic not near genes chrX_12_20715001 chrX_20715001 RAL-306_125b 3832 chrX 20721707 20721875 chrX 20721874 20722022 7 165 0.0 0.0 0.0 7.0 315 chrX 20721707 intergenic not near genes chrX 20721864 intergenic not near genes chrX 20722022 intergenic not near genes chrX_7_20720001 chrX_20720001 RAL-306_125b 3833 chrX 20741117 20741124 chrX 20741249 20741256 5 132 0.0 5.5 2.8 1.3 139 chrX 20741117 intergenic not near genes chrX 20741186 intergenic not near genes chrX 20741256 intergenic not near genes chrX_5_20740001 chrX_20740001 RAL-306_125b 3834 chrX 20810672 20810743 chrX 20810800 20810871 7 127 7.0 7.0 7.0 0.9 199 chrX 20810672 intron shakB - chrX 20810772 intron shakB - chrX 20810871 intron shakB - chrX_7_20810001 chrX_20810001 RAL-306_125b 3835 chrX 20814161 20814218 chrX 20814292 20814362 14 139 3.0 0.0 1.5 5.6 201 chrX 20814161 intron shakB - chrX 20814262 intron shakB - chrX 20814362 intron shakB - chrX_14_20810001 chrX_20810001 RAL-306_125b 3836 chrX 20836679 20836756 chrX 20844331 20844391 roo 26 7649 3.0 0.0 1.5 10.4 7712 chrX 20836679 intron shakB - chrX 20840535 intron shakB - chrX 20844391 intron shakB - chrX_26_20840001 chrX_20840001 RAL-306_125b 3837 chrX 20860203 20860267 chrX 20860352 20860416 15 148 2.0 6.5 4.2 2.9 213 chrX 20860203 intron shakB - chrX 20860310 intron shakB - chrX 20860416 intron shakB - chrX_15_20860001 chrX_20860001 RAL-306_125b 3838 chrX 20874771 20874787 chrX 20874908 20874924 4 137 8.0 5.5 6.8 0.5 153 chrX 20874771 intron shakB - chrX 20874848 intron shakB - chrX 20874924 intron shakB - chrX_4_20870001 chrX_20870001 RAL-306_125b 3839 chrX 20874790 20874823 chrX 20874904 20874960 4 128 5.0 5.5 5.2 0.6 170 chrX 20874790 intron shakB - chrX 20874875 intron shakB - chrX 20874960 intron shakB - chrX_4_20870001 chrX_20870001 RAL-306_125b 3840 chrX 20915002 20915073 chrX 20915223 20915293 11 220 5.0 3.0 4.0 2.2 291 chrX 20915002 intron shakB - chrX 20915148 intron shakB - chrX 20915293 intron shakB - chrX_11_20915001 chrX_20915001 RAL-306_125b 3841 chrX 20940675 20940703 chrX 20942194 20942222 hobo 8 1519 10.5 1.5 6.0 1.1 1547 chrX 20940675 intergenic not near genes chrX 20941448 intergenic not near genes chrX 20942222 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-306_125b 3842 chrX 20948206 20948268 chrX 20948345 20948407 9 139 1.5 9.0 5.2 1.5 201 chrX 20948206 intergenic not near genes chrX 20948306 intergenic not near genes chrX 20948407 intergenic not near genes chrX_9_20945001 chrX_20945001 RAL-306_125b 3843 chrX 20956922 20956947 chrX 20962416 20962441 I-element 8 5494 3.0 6.0 4.5 1.5 5519 chrX 20956922 intergenic not near genes chrX 20959682 intergenic not near genes chrX 20962441 intergenic Ser6 - chrX_8_20955001 chrX_20955001 RAL-306_125b 3844 chrX 20974149 20974207 chrX 20974383 20974441 11 234 4.0 0.0 2.0 3.7 292 chrX 20974149 intergenic not near genes chrX 20974295 intergenic not near genes chrX 20974441 intergenic not near genes chrX_11_20970001 chrX_20970001 RAL-306_125b 3845 chrX 21029093 21029107 chrX 21029228 21029247 8 139 2.0 1.5 1.8 2.9 154 chrX 21029093 3` UTR CG1529 - chrX 21029170 3` UTR CG1529 - chrX 21029247 3` UTR CG1529 - chrX_8_21025001 chrX_21025001 RAL-306_125b 3846 chrX 21029756 21029806 chrX 21029947 21029997 7 191 0.0 8.5 4.2 1.3 241 chrX 21029756 3` UTR CG1529 - chrX 21029876 3` UTR CG1529 - chrX 21029997 3` UTR CG1529 - chrX_7_21025001 chrX_21025001 RAL-306_125b 3847 chrX 21076285 21076348 chrX 21076412 21076431 16 125 5.5 1.0 3.2 3.8 146 chrX 21076285 intron bves + chrX 21076358 intron bves + chrX 21076431 intron bves + chrX_16_21075001 chrX_21075001 RAL-306_125b 3848 chrX 21077548 21077630 chrX 21077687 21077768 19 139 4.0 5.5 4.8 3.3 220 chrX 21077548 intron bves + chrX 21077658 intron bves + chrX 21077768 intron bves + chrX_19_21075001 chrX_21075001 RAL-306_125b 3849 chrX 21078723 21078773 chrX 21078851 21078901 12 127 6.5 1.0 3.8 2.5 178 chrX 21078723 intron bves + chrX 21078812 intron bves + chrX 21078901 intron bves + chrX_12_21075001 chrX_21075001 RAL-306_125b 3850 chrX 21140864 21140914 chrX 21140996 21141046 4 132 8.5 0.0 4.2 0.8 182 chrX 21140864 3` UTR CG34120 + chrX 21140955 intergenic CG34120 + chrX 21141046 intergenic CG34120 + chrX_4_21140001 chrX_21140001 RAL-306_125b 3851 chrX 21166101 21166113 chrX 21166229 21166241 6 128 15.0 6.0 10.5 0.5 140 chrX 21166101 intergenic not near genes chrX 21166171 intergenic not near genes chrX 21166241 intergenic not near genes chrX_6_21165001 chrX_21165001 RAL-306_125b 3852 chrX 21166115 21166165 chrX 21166222 21166296 13 127 4.5 5.5 5.0 2.2 181 chrX 21166115 intergenic not near genes chrX 21166206 intergenic not near genes chrX 21166296 intergenic not near genes chrX_13_21165001 chrX_21165001 RAL-306_125b 3853 chrX 21190776 21190824 chrX 21190896 21190953 13 123 0.5 9.5 5.0 2.2 177 chrX 21190776 intergenic not near genes chrX 21190864 intergenic not near genes chrX 21190953 intergenic not near genes chrX_13_21190001 chrX_21190001 RAL-306_125b 3854 chrX 21197021 21197080 chrX 21197134 21197208 11 121 9.0 6.0 7.5 1.3 187 chrX 21197021 intergenic not near genes chrX 21197114 intergenic not near genes chrX 21197208 intergenic not near genes chrX_11_21195001 chrX_21195001 RAL-306_125b 3855 chrX 21222023 21222092 chrX 21222153 21222227 16 131 8.5 4.0 6.2 2.2 204 chrX 21222023 intron CG32521 - chrX 21222125 intron CG32521 - chrX 21222227 intron CG32521 - chrX_16_21220001 chrX_21220001 RAL-306_125b 3856 chrX 21268021 21268080 chrX 21268152 21268211 14 130 3.5 3.5 3.5 3.1 190 chrX 21268021 intron CG32521 - chrX 21268116 intron CG32521 - chrX 21268211 intron CG32521 - chrX_14_21265001 chrX_21265001 RAL-306_125b 3857 chrX 21308832 21308862 chrX 21308988 21309038 4 171 5.5 0.0 2.8 1.1 206 chrX 21308832 exon CG1801 - chrX 21308935 intron CG1801 - chrX 21309038 intron CG1801 - chrX_4_21305001 chrX_21305001 RAL-306_125b 3858 chrX 21328068 21328143 chrX 21328229 21328302 19 160 4.5 8.0 6.2 2.6 234 chrX 21328068 3` UTR CG1486 + chrX 21328185 intergenic CG1486 +,tty - chrX 21328302 intergenic CG1486 +,tty - chrX_19_21325001 chrX_21325001 RAL-306_125b 3859 chrX 21388341 21388403 chrX 21388548 21388610 16 205 2.5 3.0 2.8 4.2 269 chrX 21388341 intergenic Hlc - chrX 21388476 intergenic mst + chrX 21388610 intergenic mst + chrX_16_21385001 chrX_21385001 RAL-306_125b 3860 chrX 21428299 21428370 chrX 21428539 21428596 13 239 6.5 6.5 6.5 1.7 297 chrX 21428299 intron CG42343 - chrX 21428448 intron CG42343 - chrX 21428596 intron CG42343 - chrX_13_21425001 chrX_21425001 RAL-306_125b 3861 chrX 21429831 21429836 chrX 21429961 21429976 INE-1 4 138 1.0 17.0 9.0 0.4 145 chrX 21429831 intron CG42343 - chrX 21429904 intron CG42343 - chrX 21429976 intron CG42343 - chrX_4_21425001 chrX_21425001 RAL-306_125b 3862 chrX 21454839 21454872 chrX 21454973 21455006 11 133 3.5 9.5 6.5 1.5 167 chrX 21454839 intron CG42343 - chrX 21454922 intron CG42343 - chrX 21455006 intron CG42343 - chrX_11_21450001 chrX_21450001 RAL-306_125b 3863 chrX 21455175 21455237 chrX 21455394 21455474 8 234 4.5 2.0 3.2 1.9 299 chrX 21455175 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455474 intron CG42343 - chrX_8_21455001 chrX_21455001 RAL-306_125b 3864 chrX 21458652 21458713 chrX 21464138 21464199 Ivk 21 5484 10.5 3.0 6.8 2.7 5547 chrX 21458652 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464199 intergenic not near genes chrX_21_21460001 chrX_21460001 RAL-306_125b 3865 chrX 21466969 21467040 chrX 21467103 21467174 17 133 4.5 2.5 3.5 3.8 205 chrX 21466969 intergenic CR45507 - chrX 21467072 intergenic CR45507 - chrX 21467174 3` UTR CR45507 - chrX_17_21465001 chrX_21465001 RAL-306_125b 3866 chrX 21474368 21474433 chrX 21474775 21474849 1731 17 412 6.0 3.5 4.8 2.9 481 chrX 21474368 intergenic not near genes chrX 21474608 intergenic not near genes chrX 21474849 intergenic not near genes chrX_17_21470001 chrX_21470001 RAL-306_125b 3867 chrX 21492238 21492301 chrX 21492401 21492464 19 160 5.0 9.5 7.2 2.3 226 chrX 21492238 intergenic not near genes chrX 21492351 intergenic not near genes chrX 21492464 intergenic not near genes chrX_19_21490001 chrX_21490001 RAL-306_125b 3868 chrX 21565398 21565433 chrX 21565526 21565561 17 128 7.0 9.0 8.0 1.9 163 chrX 21565398 intergenic not near genes chrX 21565480 intergenic not near genes chrX 21565561 intergenic not near genes chrX_17_21565001 chrX_21565001 RAL-306_125b 3869 chrX 21573846 21573913 chrX 21573983 21574050 24 136 6.0 3.5 4.8 4.1 204 chrX 21573846 intergenic not near genes chrX 21573948 intergenic not near genes chrX 21574050 intergenic not near genes chrX_24_21570001 chrX_21570001 RAL-306_125b 3870 chrX 21575493 21575569 chrX 21575622 21575692 15 129 5.5 5.5 5.5 2.3 199 chrX 21575493 intergenic not near genes chrX 21575592 intergenic not near genes chrX 21575692 intergenic not near genes chrX_15_21575001 chrX_21575001 RAL-306_125b 3871 chrX 21581505 21581570 chrX 21581636 21581670 12 128 2.5 0.0 1.2 5.5 165 chrX 21581505 intergenic not near genes chrX 21581588 intergenic not near genes chrX 21581670 intergenic not near genes chrX_12_21580001 chrX_21580001 RAL-306_125b 3872 chrX 21668214 21668290 chrX 21668349 21668425 22 133 43.0 37.5 40.2 0.5 211 chrX 21668214 intergenic not near genes chrX 21668320 intergenic not near genes chrX 21668425 intergenic not near genes chrX_22_21665001 chrX_21665001 RAL-306_125b 3873 chrX 22478871 22478898 chrX 22479043 22479081 14 182 0.0 10.0 5.0 2.3 210 chrX 22478871 intron CG12576 - chrX 22478976 intron CG12576 - chrX 22479081 intron CG12576 - chrX_14_22475001 chrX_22475001 RAL-306_125b 3874 chrX 22522587 22522656 chrX 22525458 22525525 NOF 7 2870 8.5 5.0 6.8 0.9 2938 chrX 22522587 intron CG17600 + chrX 22524056 intron CG17600 + chrX 22525525 intron CG17600 + chrX_7_22520001 chrX_22520001 RAL-306_125b 3875 chrX 22585469 22585518 chrX 22585595 22585652 11 133 7.0 0.0 3.5 2.4 183 chrX 22585469 intron Cda4 - chrX 22585560 intron Cda4 - chrX 22585652 intron Cda4 - chrX_11_22585001 chrX_22585001 RAL-306_125b 3876 chrX 22660534 22660604 chrX 22660668 22660738 11 134 3.0 3.0 3.0 2.8 204 chrX 22660534 intron CR44997 + chrX 22660636 intron CR44997 + chrX 22660738 intron CR44997 + chrX_11_22660001 chrX_22660001 RAL-306_125b 3877 chrX 22661963 22661967 chrX 22662092 22662098 4 130 0.0 11.5 5.8 0.6 135 chrX 22661963 intron CR44997 + chrX 22662030 intron CR44997 + chrX 22662098 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-306_125b 3878 chrX 22665757 22665821 chrX 22665876 22665887 22 125 6.0 4.0 5.0 3.7 130 chrX 22665757 intron CR44997 + chrX 22665822 intron CR44997 + chrX 22665887 intron CR44997 + chrX_22_22665001 chrX_22665001 RAL-306_125b 3879 chrX 22697455 22697510 chrX 22701802 22701822 Juan 19 4342 6.5 10.0 8.2 2.1 4367 chrX 22697455 intron CR44997 + chrX 22699638 intron CR44997 + chrX 22701822 intron CR44997 + chrX_19_22695001 chrX_22695001 RAL-306_125b 3880 chrX 22771461 22771526 chrX 22774802 22774842 297 24 3337 5.5 7.5 6.5 3.2 3381 chrX 22771461 intron CR44997 + chrX 22773152 intron CR44997 + chrX 22774842 intron CR44997 + chrX_24_22770001 chrX_22770001 RAL-306_125b 3881 chrX 22776348 22776377 chrX 22776686 22776715 11 337 0.0 8.5 4.2 2.1 367 chrX 22776348 intron CR44997 + chrX 22776532 intron CR44997 + chrX 22776715 intron CR44997 + chrX_11_22775001 chrX_22775001 RAL-306_125b 3882 chrX 22784051 22784106 chrX 22784184 22784239 13 130 4.0 8.5 6.2 1.8 188 chrX 22784051 intron CR44997 + chrX 22784145 intron CR44997 + chrX 22784239 intron CR44997 + chrX_13_22780001 chrX_22780001 RAL-306_125b 3883 chrX 22798723 22798800 chrX 22798890 22798967 10 162 4.0 2.0 3.0 2.5 244 chrX 22798723 intergenic not near genes chrX 22798845 intergenic not near genes chrX 22798967 intergenic not near genes chrX_10_22795001 chrX_22795001 RAL-306_125b 3884 chrX 22811957 22812004 chrX 22816771 22816826 F-element 15 4821 8.0 7.0 7.5 1.8 4869 chrX 22811957 intergenic CG12446 - chrX 22814392 intergenic not near genes chrX 22816826 intergenic not near genes chrX_15_22810001 chrX_22810001 RAL-306_125b 3885 chrX 22824220 22824435 chrX 22824396 22824618 29 181 0.0 0.0 0.0 29.0 398 chrX 22824220 intergenic fog - chrX 22824419 3` UTR fog - chrX 22824618 3` UTR fog - chrX_29_22820001 chrX_22820001 RAL-306_125b 3886 chrX 22849821 22849867 chrX 22850104 22850150 13 283 4.5 11.5 8.0 1.4 329 chrX 22849821 intron,intron fog -,CG42346 + chrX 22849986 intron,intron fog -,CG42346 + chrX 22850150 intron,intron fog -,CG42346 + chrX_13_22845001 chrX_22845001 RAL-306_125b 3887 chrX 22867943 22868008 chrX 22868107 22868180 11 169 3.5 5.5 4.5 2.0 237 chrX 22867943 exon CG42346 + chrX 22868062 intron CG42346 + chrX 22868180 intron CG42346 + chrX_11_22865001 chrX_22865001 RAL-306_125b 3888 chrX 22870823 22870890 chrX 22870964 22871030 9 140 8.0 7.5 7.8 1.0 207 chrX 22870823 intron,3` UTR CG42346 +,CR43656 - chrX 22870926 intron,3` UTR CG42346 +,CR43656 - chrX 22871030 intron,3` UTR CG42346 +,CR43656 - chrX_9_22870001 chrX_22870001 RAL-306_125b 3889 chrX 22895684 22895690 chrX 22895852 22895858 4 168 14.5 3.5 9.0 0.4 174 chrX 22895684 intergenic not near genes chrX 22895771 intergenic not near genes chrX 22895858 intergenic not near genes chrX_4_22895001 chrX_22895001 RAL-306_125b 3890 chrX 22895693 22895745 chrX 22895851 22895913 11 163 4.5 3.5 4.0 2.2 220 chrX 22895693 intergenic not near genes chrX 22895803 intergenic not near genes chrX 22895913 intergenic not near genes chrX_11_22895001 chrX_22895001 RAL-306_125b 3891 chrX 22982802 22982813 chrX 22983035 22983046 4 233 14.5 5.5 10.0 0.4 244 chrX 22982802 3` UTR,exon stnA -,stnB - chrX 22982924 intron,intron stnA -,stnB - chrX 22983046 intron,intron stnA -,stnB - chrX_4_22980001 chrX_22980001 RAL-306_125b 3892 chrX 22982845 22982868 chrX 22983021 22983092 11 227 8.0 4.5 6.2 1.5 247 chrX 22982845 intron,intron stnA -,stnB - chrX 22982968 intron,intron stnA -,stnB - chrX 22983092 intron,intron stnA -,stnB - chrX_11_22980001 chrX_22980001 RAL-306_125b 3893 chrX 22987067 22987125 chrX 22989771 22989834 Burdock 18 2709 11.0 7.5 9.2 1.8 2767 chrX 22987067 intron,intron stnA -,stnB - chrX 22988450 intron,intron stnA -,stnB - chrX 22989834 intron,intron stnA -,stnB - chrX_18_22985001 chrX_22985001 RAL-306_125b 3894 chrX 22996273 22996334 chrX 23003557 23003597 roo 11 7281 6.5 12.5 9.5 1.0 7324 chrX 22996273 intron,intron stnA -,stnB - chrX 22999935 intron,intron stnA -,stnB - chrX 23003597 intron,intron stnA -,stnB - chrX_11_22995001 chrX_22995001 RAL-306_125b 3895 chrY 864666 864739 chrY 864793 864865 7 126 42.0 44.5 43.2 0.2 199 chrY 864666 intergenic not near genes chrY 864766 intergenic not near genes chrY 864865 intergenic not near genes chrY_7_860001 chrY_860001 RAL-306_125b 3896 chrY 975794 975815 chrY 975904 976005 9 150 128.5 136.5 132.5 0.1 211 chrY 975794 intergenic not near genes chrY 975900 intergenic not near genes chrY 976005 intergenic not near genes chrY_9_975001 chrY_975001 RAL-306_125b 3897 chrY 1419854 1419879 chrY 1420158 1420183 6 302 20.5 16.5 18.5 0.3 329 chrY 1419854 intergenic not near genes chrY 1420018 intergenic not near genes chrY 1420183 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-306_125b 3898 chrY 1445412 1445441 chrY 1447400 1447421 8 1984 22.5 17.5 20.0 0.4 2009 chrY 1445412 intergenic not near genes chrY 1446416 intergenic not near genes chrY 1447421 intergenic not near genes chrY_8_1445001 chrY_1445001 RAL-306_125b 3899 chrY 3664964 3664982 chrY 3665099 3665121 4 138 1.0 0.5 0.8 2.2 157 chrY 3664964 intergenic CG40948 + chrY 3665042 intergenic CG40948 + chrY 3665121 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-306_125b