SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 347895 347913 chr2L 355394 355413 blood 7 7500 0.5 2.5 1.5 2.8 7518 chr2L 347895 3` UTR Plc21C + chr2L 351654 intron Plc21C + chr2L 355413 3` UTR Plc21C + chr2L_7_350001 chr2L_350001 RAL-304_75b 2 chr2L 597180 597188 chr2L 597299 597306 4 118 6.0 11.5 8.8 0.4 126 chr2L 597180 intergenic not near genes chr2L 597243 intergenic not near genes chr2L 597306 intergenic not near genes chr2L_4_595001 chr2L_595001 RAL-304_75b 3 chr2L 668442 668463 chr2L 668522 668543 15 80 5.5 0.0 2.8 3.9 101 chr2L 668442 intron ds - chr2L 668492 intron ds - chr2L 668543 intron ds - chr2L_15_665001 chr2L_665001 RAL-304_75b 4 chr2L 877857 877860 chr2L 877936 877941 7 81 2.0 1.5 1.8 2.5 84 chr2L 877857 3` UTR,exon CG15824 -,ninaA + chr2L 877899 3` UTR,intron CG15824 -,ninaA + chr2L 877941 3` UTR,intron CG15824 -,ninaA + chr2L_7_875001 chr2L_875001 RAL-304_75b 5 chr2L 996726 996756 chr2L 1005821 1005848 roo 5 9094 0.0 1.0 0.5 3.3 9122 chr2L 996726 intergenic not near genes chr2L 1001287 intergenic not near genes chr2L 1005848 intergenic not near genes chr2L_5_1000001 chr2L_1000001 RAL-304_75b 6 chr2L 1035561 1035575 chr2L 1035638 1035652 8 77 2.5 1.0 1.8 2.9 91 chr2L 1035561 intron IA-2 - chr2L 1035606 intron IA-2 - chr2L 1035652 intron IA-2 - chr2L_8_1035001 chr2L_1035001 RAL-304_75b 7 chr2L 1074069 1074094 chr2L 1074149 1074172 5 79 0.0 0.0 0.0 5.0 103 chr2L 1074069 intron S - chr2L 1074120 intron S - chr2L 1074172 intron S - chr2L_5_1070001 chr2L_1070001 RAL-304_75b 8 chr2L 1508077 1508266 chr2L 1508160 1508351 6 84 3.0 5.0 4.0 1.2 274 chr2L 1508077 intergenic not near genes chr2L 1508214 intergenic not near genes chr2L 1508351 intergenic not near genes chr2L_6_1505001 chr2L_1505001 RAL-304_75b 9 chr2L 1536506 1536520 chr2L 1536637 1536651 5 131 0.0 1.5 0.8 2.8 145 chr2L 1536506 intergenic not near genes chr2L 1536578 intergenic not near genes chr2L 1536651 intergenic not near genes chr2L_5_1535001 chr2L_1535001 RAL-304_75b 10 chr2L 1537276 1537276 chr2L 1537506 1537507 4 231 1.0 0.0 0.5 2.7 231 chr2L 1537276 intergenic not near genes chr2L 1537392 intergenic not near genes chr2L 1537507 intergenic not near genes chr2L_4_1535001 chr2L_1535001 RAL-304_75b 11 chr2L 1570690 1570713 chr2L 1573561 1573585 F-element 6 2872 2.5 4.5 3.5 1.3 2895 chr2L 1570690 intron haf + chr2L 1572138 intron haf + chr2L 1573585 intron haf + chr2L_6_1570001 chr2L_1570001 RAL-304_75b 12 chr2L 1577266 1577270 chr2L 1577346 1577353 5 82 3.0 1.0 2.0 1.7 87 chr2L 1577266 intron haf + chr2L 1577310 intron haf + chr2L 1577353 intron haf + chr2L_5_1575001 chr2L_1575001 RAL-304_75b 13 chr2L 1887959 1887965 chr2L 1888143 1888149 4 184 2.0 4.0 3.0 1.0 190 chr2L 1887959 intron CG7337 + chr2L 1888054 intron CG7337 + chr2L 1888149 intron CG7337 + chr2L_4_1885001 chr2L_1885001 RAL-304_75b 14 chr2L 1944190 1944191 chr2L 1944274 1944274 4 84 0.5 0.5 0.5 2.7 84 chr2L 1944190 intergenic CG7337 + chr2L 1944232 intergenic CG7337 + chr2L 1944274 intergenic CG7337 + chr2L_4_1940001 chr2L_1940001 RAL-304_75b 15 chr2L 2100391 2100400 chr2L 2109542 2109549 roo 4 9150 1.0 1.0 1.0 2.0 9158 chr2L 2100391 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109549 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-304_75b 16 chr2L 2145747 2145774 chr2L 2145833 2145859 4 85 2.5 0.0 1.2 1.8 112 chr2L 2145747 3` UTR CG11723 - chr2L 2145803 3` UTR CG11723 - chr2L 2145859 3` UTR CG11723 - chr2L_4_2145001 chr2L_2145001 RAL-304_75b 17 chr2L 2262306 2262334 chr2L 2262383 2262411 6 76 0.0 0.0 0.0 6.0 105 chr2L 2262306 intergenic not near genes chr2L 2262358 intergenic not near genes chr2L 2262411 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RAL-304_75b 18 chr2L 2290603 2290605 chr2L 2290677 2290679 4 75 0.5 4.5 2.5 1.1 76 chr2L 2290603 exon robl22E - chr2L 2290641 5` UTR robl22E - chr2L 2290679 intron robl22E - chr2L_4_2290001 chr2L_2290001 RAL-304_75b 19 chr2L 2294045 2294050 chr2L 2299248 2299255 copia 5 5205 0.0 0.0 0.0 5.0 5210 chr2L 2294045 intergenic not near genes chr2L 2296650 intergenic not near genes chr2L 2299255 intergenic not near genes chr2L_5_2295001 chr2L_2295001 RAL-304_75b 20 chr2L 2503725 2503734 chr2L 2504504 2504511 6 778 5.5 1.5 3.5 1.3 786 chr2L 2503725 intergenic not near genes chr2L 2504118 intergenic not near genes chr2L 2504511 intergenic not near genes chr2L_6_2500001 chr2L_2500001 RAL-304_75b 21 chr2L 2587831 2587841 chr2L 2587910 2587920 6 78 2.0 1.5 1.8 2.1 89 chr2L 2587831 intergenic not near genes chr2L 2587876 intergenic not near genes chr2L 2587920 intergenic not near genes chr2L_6_2585001 chr2L_2585001 RAL-304_75b 22 chr2L 2618038 2618070 chr2L 2618114 2618146 4 78 0.0 2.5 1.2 1.8 108 chr2L 2618038 intergenic not near genes chr2L 2618092 intergenic not near genes chr2L 2618146 intergenic not near genes chr2L_4_2615001 chr2L_2615001 RAL-304_75b 23 chr2L 2914597 2914630 chr2L 21771218 21771218 7 18856602 5.0 6.5 5.8 1.0 18856621 chr2L 2914597 intron lilli + chr2L 12342908 intergenic not near genes chr2L 21771218 intron CG31612 - chr2L_7_12340001 chr2L_12340001 RAL-304_75b 24 chr2L 3001615 3001627 chr2L 3001696 3001710 10 82 2.0 2.0 2.0 3.3 95 chr2L 3001615 intron CG17265 + chr2L 3001662 intron CG17265 + chr2L 3001710 intron CG17265 + chr2L_10_3000001 chr2L_3000001 RAL-304_75b 25 chr2L 3073047 3073063 chr2L 3078249 3078263 copia 9 5202 1.0 2.0 1.5 3.6 5216 chr2L 3073047 intron toc - chr2L 3075655 intron toc - chr2L 3078263 intron toc - chr2L_9_3075001 chr2L_3075001 RAL-304_75b 26 chr2L 3367025 3367042 chr2L 3367175 3367191 8 150 3.0 1.0 2.0 2.7 166 chr2L 3367025 intron CG34394 - chr2L 3367108 intron CG34394 - chr2L 3367191 intron CG34394 - chr2L_8_3365001 chr2L_3365001 RAL-304_75b 27 chr2L 3388601 3388625 chr2L 3388842 3388866 pogo 4 241 2.5 0.0 1.2 1.8 265 chr2L 3388601 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388866 intergenic CG42460 -,CR44791 + chr2L_4_3385001 chr2L_3385001 RAL-304_75b 28 chr2L 3634105 3634117 chr2L 3634187 3634199 4 82 1.5 2.5 2.0 1.3 94 chr2L 3634105 intron for - chr2L 3634152 intron for - chr2L 3634199 intron for - chr2L_4_3630001 chr2L_3630001 RAL-304_75b 29 chr2L 3729172 3729198 chr2L 3729270 3729296 6 98 0.0 3.0 1.5 2.4 124 chr2L 3729172 intergenic Shaw + chr2L 3729234 intergenic Shaw + chr2L 3729296 intergenic Shaw + chr2L_6_3725001 chr2L_3725001 RAL-304_75b 30 chr2L 3820139 3820169 chr2L 3820227 3820255 9 88 0.0 0.5 0.2 7.5 116 chr2L 3820139 intergenic not near genes chr2L 3820197 intergenic not near genes chr2L 3820255 intergenic not near genes chr2L_9_3820001 chr2L_3820001 RAL-304_75b 31 chr2L 3820457 3820473 chr2L 3820557 3820576 5 102 1.5 3.5 2.5 1.4 119 chr2L 3820457 intergenic not near genes chr2L 3820516 intergenic not near genes chr2L 3820576 intergenic not near genes chr2L_5_3820001 chr2L_3820001 RAL-304_75b 32 chr2L 3876256 3876259 chr2L 3876334 3876334 4 77 3.5 0.5 2.0 1.3 78 chr2L 3876256 intron capu - chr2L 3876295 intron capu - chr2L 3876334 intron capu - chr2L_4_3875001 chr2L_3875001 RAL-304_75b 33 chr2L 3884792 3884814 chr2L 3884869 3884891 5 76 0.0 3.5 1.8 1.8 99 chr2L 3884792 intron capu - chr2L 3884842 intron capu - chr2L 3884891 intron capu - chr2L_5_3880001 chr2L_3880001 RAL-304_75b 34 chr2L 3943799 3943824 chr2L 3943890 3943915 7 91 1.0 2.5 1.8 2.5 116 chr2L 3943799 intron fred - chr2L 3943857 intron fred - chr2L 3943915 intron fred - chr2L_7_3940001 chr2L_3940001 RAL-304_75b 35 chr2L 4082905 4082919 chr2L 4083006 4083023 4 103 0.5 2.5 1.5 1.6 118 chr2L 4082905 intron ed + chr2L 4082964 intron ed + chr2L 4083023 intron ed + chr2L_4_4080001 chr2L_4080001 RAL-304_75b 36 chr2L 4409918 4409948 chr2L 4410228 4410257 15 309 0.0 1.0 0.5 10.0 339 chr2L 4409918 intron CG15431 - chr2L 4410088 intron CG15431 - chr2L 4410257 intron CG15431 - chr2L_15_4410001 chr2L_4410001 RAL-304_75b 37 chr2L 4791980 4791984 chr2L 4792409 4792413 6 429 3.0 2.5 2.8 1.6 433 chr2L 4791980 intron CG15630 - chr2L 4792196 intron CG15630 - chr2L 4792413 intron CG15630 - chr2L_6_4790001 chr2L_4790001 RAL-304_75b 38 chr2L 4819508 4819511 chr2L 4819626 4819634 5 121 1.0 0.0 0.5 3.3 126 chr2L 4819508 intergenic not near genes chr2L 4819571 intergenic not near genes chr2L 4819634 intergenic not near genes chr2L_5_4815001 chr2L_4815001 RAL-304_75b 39 chr2L 4841085 4841085 chr2L 4841160 4841161 4 76 5.0 3.0 4.0 0.8 76 chr2L 4841085 intron CG12194 + chr2L 4841123 intron CG12194 + chr2L 4841161 exon CG12194 + chr2L_4_4840001 chr2L_4840001 RAL-304_75b 40 chr2L 5099254 5099260 chr2L 5099349 5099356 4 96 1.0 4.0 2.5 1.1 102 chr2L 5099254 3` UTR,3` UTR CG4230 +,CG8680 - chr2L 5099305 3` UTR CG8680 - chr2L 5099356 3` UTR CG8680 - chr2L_4_5095001 chr2L_5095001 RAL-304_75b 41 chr2L 5262526 5262542 chr2L 5262603 5262619 8 76 1.0 1.5 1.2 3.6 93 chr2L 5262526 intron tkv - chr2L 5262572 intron tkv - chr2L 5262619 intron tkv - chr2L_8_5260001 chr2L_5260001 RAL-304_75b 42 chr2L 5342769 5342801 chr2L 5345148 5345181 Doc 5 2380 2.0 1.0 1.5 2.0 2412 chr2L 5342769 intergenic not near genes chr2L 5343975 intergenic not near genes chr2L 5345181 intergenic not near genes chr2L_5_5340001 chr2L_5340001 RAL-304_75b 43 chr2L 5490090 5490095 chr2L 5490169 5490173 7 80 1.5 3.0 2.2 2.2 83 chr2L 5490090 intergenic not near genes chr2L 5490132 intergenic not near genes chr2L 5490173 intergenic not near genes chr2L_7_5490001 chr2L_5490001 RAL-304_75b 44 chr2L 5516660 5516668 chr2L 5516739 5516747 4 79 0.5 2.0 1.2 1.8 87 chr2L 5516660 intergenic not near genes chr2L 5516704 intergenic not near genes chr2L 5516747 intergenic not near genes chr2L_4_5515001 chr2L_5515001 RAL-304_75b 45 chr2L 5550115 5550122 chr2L 5550197 5550205 4 82 0.0 0.0 0.0 4.0 90 chr2L 5550115 exon CG14014 - chr2L 5550160 exon CG14014 - chr2L 5550205 exon CG14014 - chr2L_4_5550001 chr2L_5550001 RAL-304_75b 46 chr2L 5685427 5685433 chr2L 5685505 5685511 4 78 1.0 0.0 0.5 2.7 84 chr2L 5685427 intergenic not near genes chr2L 5685469 intergenic not near genes chr2L 5685511 intergenic not near genes chr2L_4_5685001 chr2L_5685001 RAL-304_75b 47 chr2L 5695865 5695881 chr2L 5695957 5695973 7 92 1.5 2.0 1.8 2.5 108 chr2L 5695865 intergenic not near genes chr2L 5695919 intergenic not near genes chr2L 5695973 intergenic not near genes chr2L_7_5695001 chr2L_5695001 RAL-304_75b 48 chr2L 5806062 5806076 chr2L 5806143 5806156 7 81 1.5 1.0 1.2 3.2 94 chr2L 5806062 intron CG11034 + chr2L 5806109 intron CG11034 + chr2L 5806156 intron CG11034 + chr2L_7_5805001 chr2L_5805001 RAL-304_75b 49 chr2L 5816182 5816206 chr2L 5816258 5816282 7 76 4.5 2.5 3.5 1.6 100 chr2L 5816182 intergenic not near genes chr2L 5816232 intergenic not near genes chr2L 5816282 intergenic not near genes chr2L_7_5815001 chr2L_5815001 RAL-304_75b 50 chr2L 5827718 5827721 chr2L 5836726 5836726 roo 6 9008 10.5 7.5 9.0 0.6 9008 chr2L 5827718 intron TrissinR + chr2L 5832222 intron TrissinR + chr2L 5836726 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-304_75b 51 chr2L 5870491 5870501 chr2L 5870568 5870578 4 76 0.5 0.5 0.5 2.7 87 chr2L 5870491 intron rau - chr2L 5870534 intron rau - chr2L 5870578 intron rau - chr2L_4_5870001 chr2L_5870001 RAL-304_75b 52 chr2L 5897592 5897613 chr2L 5897675 5897695 6 82 3.0 2.5 2.8 1.6 103 chr2L 5897592 intergenic not near genes chr2L 5897644 intergenic not near genes chr2L 5897695 intergenic not near genes chr2L_6_5895001 chr2L_5895001 RAL-304_75b 53 chr2L 5982131 5982153 chr2L 5982210 5982227 5 78 2.0 1.0 1.5 2.0 96 chr2L 5982131 intron eIF-4a + chr2L 5982179 intron eIF-4a + chr2L 5982227 intron eIF-4a + chr2L_5_5980001 chr2L_5980001 RAL-304_75b 54 chr2L 6318745 6318756 chr2L 6318899 6318907 6 153 3.0 2.5 2.8 1.6 162 chr2L 6318745 intron Ddr + chr2L 6318826 intron Ddr + chr2L 6318907 intron Ddr + chr2L_6_6315001 chr2L_6315001 RAL-304_75b 55 chr2L 6544373 6544393 chr2L 6544465 6544484 8 92 1.5 1.0 1.2 3.6 111 chr2L 6544373 intron eya - chr2L 6544428 intron eya - chr2L 6544484 intron eya - chr2L_8_6540001 chr2L_6540001 RAL-304_75b 56 chr2L 6545803 6545814 chr2L 6545889 6545900 5 86 1.0 2.5 1.8 1.8 97 chr2L 6545803 intron eya - chr2L 6545852 intron eya - chr2L 6545900 intron eya - chr2L_5_6545001 chr2L_6545001 RAL-304_75b 57 chr2L 6626892 6626914 chr2L 6626977 6626999 7 85 2.5 0.5 1.5 2.8 107 chr2L 6626892 intron Oatp26F - chr2L 6626946 intron Oatp26F - chr2L 6626999 intron Oatp26F - chr2L_7_6625001 chr2L_6625001 RAL-304_75b 58 chr2L 6772006 6772019 chr2L 6772093 6772106 4 87 3.5 3.0 3.2 1.0 100 chr2L 6772006 intron CG11321 - chr2L 6772056 intron CG11321 - chr2L 6772106 intron CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-304_75b 59 chr2L 6891446 6891460 chr2L 6891544 6891558 6 98 2.0 0.0 1.0 3.0 112 chr2L 6891446 intron Nlg2 + chr2L 6891502 intron Nlg2 + chr2L 6891558 intron Nlg2 + chr2L_6_6890001 chr2L_6890001 RAL-304_75b 60 chr2L 7121705 7121706 chr2L 16113613 16113615 5 8991909 1.5 4.0 2.8 1.3 8991910 chr2L 7121705 intron Pvf3 - chr2L 11617660 intron kek2 + chr2L 16113615 intergenic not near genes chr2L_5_11615001 chr2L_11615001 RAL-304_75b 61 chr2L 7301321 7301325 chr2L 7301403 7301408 4 83 1.5 5.5 3.5 0.9 87 chr2L 7301321 intergenic not near genes chr2L 7301364 intergenic not near genes chr2L 7301408 intergenic not near genes chr2L_4_7300001 chr2L_7300001 RAL-304_75b 62 chr2L 7567497 7567513 chr2L 7567574 7567590 5 77 3.0 2.5 2.8 1.3 93 chr2L 7567497 intron RapGAP1 - chr2L 7567544 intron RapGAP1 - chr2L 7567590 intron RapGAP1 - chr2L_5_7565001 chr2L_7565001 RAL-304_75b 63 chr2L 8013616 8013622 chr2L 8018821 8018827 copia 6 5205 1.0 0.0 0.5 4.0 5211 chr2L 8013616 intron Tg + chr2L 8016222 intron Tg + chr2L 8018827 intron Tg + chr2L_6_8015001 chr2L_8015001 RAL-304_75b 64 chr2L 8244732 8244735 chr2L 8244854 8244854 4 121 1.0 2.5 1.8 1.4 122 chr2L 8244732 intron CG8086 - chr2L 8244793 intron CG8086 - chr2L 8244854 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-304_75b 65 chr2L 8336940 8336940 chr2L 8337017 8337019 6 78 0.5 1.0 0.8 3.3 79 chr2L 8336940 intergenic not near genes chr2L 8336980 intergenic not near genes chr2L 8337019 intergenic not near genes chr2L_6_8335001 chr2L_8335001 RAL-304_75b 66 chr2L 8389946 8389980 chr2L 8390080 8390111 7 133 0.5 0.0 0.2 5.8 165 chr2L 8389946 3` UTR CG42820 - chr2L 8390028 3` UTR CG42820 - chr2L 8390111 exon CG42820 - chr2L_7_8390001 chr2L_8390001 RAL-304_75b 67 chr2L 8452418 8452437 chr2L 8461589 8461608 roo 5 9169 2.5 4.0 3.2 1.2 9190 chr2L 8452418 intron fu12 - chr2L 8457013 intron fu12 - chr2L 8461608 intron fu12 - chr2L_5_8455001 chr2L_8455001 RAL-304_75b 68 chr2L 8498209 8498225 chr2L 8498290 8498306 8 81 3.0 1.0 2.0 2.7 97 chr2L 8498209 intron Dh31 - chr2L 8498258 intron Dh31 - chr2L 8498306 intron Dh31 - chr2L_8_8495001 chr2L_8495001 RAL-304_75b 69 chr2L 8604966 8604982 chr2L 8605064 8605080 4 98 7.5 2.5 5.0 0.7 114 chr2L 8604966 intron Sema-1a + chr2L 8605023 intron Sema-1a + chr2L 8605080 intron Sema-1a + chr2L_4_8605001 chr2L_8605001 RAL-304_75b 70 chr2L 8746185 8746190 chr2L 8746268 8746271 5 83 0.5 2.5 1.5 2.0 86 chr2L 8746185 intergenic not near genes chr2L 8746228 intergenic not near genes chr2L 8746271 intergenic not near genes chr2L_5_8745001 chr2L_8745001 RAL-304_75b 71 chr2L 8803191 8803195 chr2L 8803278 8803283 6 88 3.5 1.0 2.2 1.9 92 chr2L 8803191 intergenic not near genes chr2L 8803237 intergenic not near genes chr2L 8803283 intergenic not near genes chr2L_6_8800001 chr2L_8800001 RAL-304_75b 72 chr2L 9000281 9000299 chr2L 9007791 9007809 roo 10 7509 2.0 0.0 1.0 5.0 7528 chr2L 9000281 intergenic Try29F + chr2L 9004045 intergenic not near genes chr2L 9007809 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-304_75b 73 chr2L 9027775 9027776 chr2L 9028059 9028060 4 284 0.5 1.0 0.8 2.2 285 chr2L 9027775 intron,intron CG9582 -,CR44352 - chr2L 9027918 intron,intron CG9582 -,CR44352 - chr2L 9028060 intron,intron CG9582 -,CR44352 - chr2L_4_9025001 chr2L_9025001 RAL-304_75b 74 chr2L 9152162 9152162 chr2L 9152289 9152289 4 127 0.0 0.0 0.0 4.0 127 chr2L 9152162 intron CG32982 + chr2L 9152226 intron CG32982 + chr2L 9152289 intron CG32982 + chr2L_4_9150001 chr2L_9150001 RAL-304_75b 75 chr2L 9202058 9202088 chr2L 9202132 9202164 6 75 0.5 0.0 0.2 5.0 106 chr2L 9202058 intron tai + chr2L 9202111 intron tai + chr2L 9202164 intron tai + chr2L_6_9200001 chr2L_9200001 RAL-304_75b 76 chr2L 9278895 9278915 chr2L 9278984 9279005 4 90 0.0 0.5 0.2 3.3 110 chr2L 9278895 intron Ggamma30A + chr2L 9278950 intron Ggamma30A + chr2L 9279005 intron Ggamma30A + chr2L_4_9275001 chr2L_9275001 RAL-304_75b 77 chr2L 9283219 9283435 chr2L 9283317 9283517 7 87 1.5 0.0 0.8 3.9 298 chr2L 9283219 intron Ggamma30A + chr2L 9283368 intron Ggamma30A + chr2L 9283517 intron Ggamma30A + chr2L_7_9280001 chr2L_9280001 RAL-304_75b 78 chr2L 9303524 9303548 chr2L 9303603 9303628 6 80 0.5 6.0 3.2 1.4 104 chr2L 9303524 intergenic not near genes chr2L 9303576 intergenic not near genes chr2L 9303628 intergenic not near genes chr2L_6_9300001 chr2L_9300001 RAL-304_75b 79 chr2L 9387253 9387266 chr2L 9387351 9387364 4 98 2.5 0.0 1.2 1.8 111 chr2L 9387253 intron Shawl - chr2L 9387308 intron Shawl - chr2L 9387364 intron Shawl - chr2L_4_9385001 chr2L_9385001 RAL-304_75b 80 chr2L 9454988 9454999 chr2L 9455088 9455101 12 101 0.5 1.0 0.8 6.7 113 chr2L 9454988 intron numb + chr2L 9455044 intron numb + chr2L 9455101 intron numb + chr2L_12_9455001 chr2L_9455001 RAL-304_75b 81 chr2L 9490521 9490550 chr2L 9490601 9490630 10 79 0.5 1.0 0.8 5.6 109 chr2L 9490521 intergenic not near genes chr2L 9490576 intergenic not near genes chr2L 9490630 intergenic not near genes chr2L_10_9490001 chr2L_9490001 RAL-304_75b 82 chr2L 9532042 9532056 chr2L 9532127 9532141 8 85 0.5 0.0 0.2 6.7 99 chr2L 9532042 intron Oatp30B + chr2L 9532092 intron Oatp30B + chr2L 9532141 intron Oatp30B + chr2L_8_9530001 chr2L_9530001 RAL-304_75b 83 chr2L 9861619 9861636 chr2L 9861803 9861823 7 186 2.5 2.5 2.5 2.0 204 chr2L 9861619 intron nAChRalpha6 - chr2L 9861721 intron nAChRalpha6 - chr2L 9861823 intron nAChRalpha6 - chr2L_7_9860001 chr2L_9860001 RAL-304_75b 84 chr2L 9973750 9973753 chr2L 9980867 9980872 HMS-Beagle 4 7118 0.5 4.5 2.5 1.1 7122 chr2L 9973750 intergenic not near genes chr2L 9977311 intergenic not near genes chr2L 9980872 intergenic not near genes chr2L_4_9975001 chr2L_9975001 RAL-304_75b 85 chr2L 10051743 10051752 chr2L 10051826 10051836 5 84 2.5 0.0 1.2 2.3 93 chr2L 10051743 5` UTR CR44874 + chr2L 10051790 5` UTR CR44874 + chr2L 10051836 5` UTR CR44874 + chr2L_5_10050001 chr2L_10050001 RAL-304_75b 86 chr2L 10094295 10094313 chr2L 10094470 10094487 4 174 5.5 4.5 5.0 0.7 192 chr2L 10094295 intron CG44153 - chr2L 10094391 intron CG44153 - chr2L 10094487 intron CG44153 - chr2L_4_10090001 chr2L_10090001 RAL-304_75b 87 chr2L 10105289 10105307 chr2L 10105365 10105383 4 76 0.5 0.0 0.2 3.3 94 chr2L 10105289 intron,intron CG44153 -,CG34109 + chr2L 10105336 intron,intron CG44153 -,CG34109 + chr2L 10105383 intron,intron CG44153 -,CG34109 + chr2L_4_10105001 chr2L_10105001 RAL-304_75b 88 chr2L 10108982 10109002 chr2L 10109064 10109085 11 82 4.5 1.5 3.0 2.8 103 chr2L 10108982 intron,intron CG44153 -,CG34109 + chr2L 10109034 intron,intron CG44153 -,CG34109 + chr2L 10109085 intron,intron CG44153 -,CG34109 + chr2L_11_10105001 chr2L_10105001 RAL-304_75b 89 chr2L 10153211 10153231 chr2L 10153290 10153310 4 79 0.0 3.5 1.8 1.4 99 chr2L 10153211 intron,exon CG44153 -,CG4839 + chr2L 10153260 intron,intron CG44153 -,CG4839 + chr2L 10153310 intron,intron CG44153 -,CG4839 + chr2L_4_10150001 chr2L_10150001 RAL-304_75b 90 chr2L 10156335 10156353 chr2L 10163805 10163823 blood 5 7470 3.5 1.5 2.5 1.4 7488 chr2L 10156335 intron,3` UTR CG44153 -,CG4839 + chr2L 10160079 intron CG44153 - chr2L 10163823 intron CG44153 - chr2L_5_10160001 chr2L_10160001 RAL-304_75b 91 chr2L 10227538 10227549 chr2L 10227614 10227623 6 76 0.5 2.5 1.5 2.4 85 chr2L 10227538 intergenic CG5694 - chr2L 10227580 intergenic CG5694 - chr2L 10227623 intergenic CG5694 - chr2L_6_10225001 chr2L_10225001 RAL-304_75b 92 chr2L 10447093 10447094 chr2L 10447203 10447204 4 110 0.0 3.5 1.8 1.4 111 chr2L 10447093 intron loh + chr2L 10447148 intron loh + chr2L 10447204 intron loh + chr2L_4_10445001 chr2L_10445001 RAL-304_75b 93 chr2L 10480316 10480316 chr2L 10480394 10480394 4 78 0.0 0.0 0.0 4.0 78 chr2L 10480316 intron RluA-2 + chr2L 10480355 intron RluA-2 + chr2L 10480394 intron RluA-2 + chr2L_4_10480001 chr2L_10480001 RAL-304_75b 94 chr2L 10515369 10515374 chr2L 10515462 10515466 4 93 2.5 1.5 2.0 1.3 97 chr2L 10515369 intron,intron CG45083 -,Fatp - chr2L 10515418 intron,intron CG45083 -,Fatp - chr2L 10515466 intron,intron CG45083 -,Fatp - chr2L_4_10515001 chr2L_10515001 RAL-304_75b 95 chr2L 10531618 10531618 chr2L 10531709 10531710 4 92 0.0 0.0 0.0 4.0 92 chr2L 10531618 3` UTR Lip4 + chr2L 10531664 3` UTR Lip4 + chr2L 10531710 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 RAL-304_75b 96 chr2L 10698585 10698592 chr2L 10698672 10698683 4 90 0.0 2.5 1.2 1.8 98 chr2L 10698585 intergenic CR44181 + chr2L 10698634 intergenic CR44181 + chr2L 10698683 intergenic CR44181 + chr2L_4_10695001 chr2L_10695001 RAL-304_75b 97 chr2L 10862850 10862868 chr2L 10864461 10864480 Rt1c 4 1612 1.0 1.0 1.0 2.0 1630 chr2L 10862850 3` UTR CR43807 - chr2L 10863665 intron CR43807 - chr2L 10864480 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-304_75b 98 chr2L 10946949 10946967 chr2L 10956164 10956182 roo 6 9215 1.0 3.5 2.2 1.9 9233 chr2L 10946949 intron dpr2 - chr2L 10951566 intron dpr2 - chr2L 10956182 intron dpr2 - chr2L_6_10950001 chr2L_10950001 RAL-304_75b 99 chr2L 11012304 11012326 chr2L 11012392 11012413 5 88 0.0 1.5 0.8 2.8 109 chr2L 11012304 intergenic dUTPase + chr2L 11012358 intergenic dUTPase + chr2L 11012413 intergenic dUTPase + chr2L_5_11010001 chr2L_11010001 RAL-304_75b 100 chr2L 11380611 11380643 chr2L 11380688 11380720 7 77 1.0 2.0 1.5 2.8 109 chr2L 11380611 intergenic not near genes chr2L 11380666 intergenic not near genes chr2L 11380720 intergenic not near genes chr2L_7_11380001 chr2L_11380001 RAL-304_75b 101 chr2L 11540604 11540604 chr2L 11548006 11548006 Tabor 4 7402 0.5 1.5 1.0 2.0 7402 chr2L 11540604 intergenic not near genes chr2L 11544305 intergenic not near genes chr2L 11548006 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-304_75b 102 chr2L 11657981 11657999 chr2L 11658066 11658083 5 84 3.5 1.0 2.2 1.6 102 chr2L 11657981 3` UTR CG43167 + chr2L 11658032 intergenic CG43167 + chr2L 11658083 intergenic CG43167 + chr2L_5_11655001 chr2L_11655001 RAL-304_75b 103 chr2L 11723115 11723123 chr2L 11723195 11723204 6 81 0.0 2.0 1.0 3.0 89 chr2L 11723115 intergenic not near genes chr2L 11723160 intergenic not near genes chr2L 11723204 intergenic not near genes chr2L_6_11720001 chr2L_11720001 RAL-304_75b 104 chr2L 11770610 11770625 chr2L 11770697 11770712 4 87 1.5 2.5 2.0 1.3 102 chr2L 11770610 intergenic not near genes chr2L 11770661 intergenic not near genes chr2L 11770712 intergenic not near genes chr2L_4_11770001 chr2L_11770001 RAL-304_75b 105 chr2L 11820437 11820459 chr2L 11820518 11820539 7 81 0.5 0.5 0.5 4.7 102 chr2L 11820437 intron Pde1c - chr2L 11820488 intron Pde1c - chr2L 11820539 intron Pde1c - chr2L_7_11820001 chr2L_11820001 RAL-304_75b 106 chr2L 12131479 12131497 chr2L 12131575 12131592 5 96 3.0 1.0 2.0 1.7 113 chr2L 12131479 intron rho-6 - chr2L 12131536 intron rho-6 - chr2L 12131592 intron rho-6 - chr2L_5_12130001 chr2L_12130001 RAL-304_75b 107 chr2L 12132722 12132727 chr2L 12132808 12132813 4 86 0.0 1.5 0.8 2.2 91 chr2L 12132722 intron rho-6 - chr2L 12132768 intron rho-6 - chr2L 12132813 intron rho-6 - chr2L_4_12130001 chr2L_12130001 RAL-304_75b 108 chr2L 12244901 12244912 chr2L 12244989 12245000 5 88 0.5 0.0 0.2 4.2 99 chr2L 12244901 intron aret + chr2L 12244950 intron aret + chr2L 12245000 intron aret + chr2L_5_12240001 chr2L_12240001 RAL-304_75b 109 chr2L 12263958 12263969 chr2L 12264040 12264051 4 82 3.0 5.0 4.0 0.8 93 chr2L 12263958 intron aret + chr2L 12264004 intron aret + chr2L 12264051 intron aret + chr2L_4_12260001 chr2L_12260001 RAL-304_75b 110 chr2L 12272437 12272455 chr2L 12272524 12272542 4 87 2.5 0.5 1.5 1.6 105 chr2L 12272437 intron aret + chr2L 12272490 intron aret + chr2L 12272542 intron aret + chr2L_4_12270001 chr2L_12270001 RAL-304_75b 111 chr2L 12300351 12300376 chr2L 12300443 12300467 5 92 1.5 0.0 0.8 2.8 116 chr2L 12300351 intron aret + chr2L 12300409 intron aret + chr2L 12300467 intron aret + chr2L_5_12300001 chr2L_12300001 RAL-304_75b 112 chr2L 12529233 12529263 chr2L 12529385 12529415 6 152 2.5 2.0 2.2 1.9 182 chr2L 12529233 intron bun - chr2L 12529324 intron bun - chr2L 12529415 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-304_75b 113 chr2L 12739175 12739191 chr2L 12743956 12743972 Doc 6 4781 0.0 2.0 1.0 3.0 4797 chr2L 12739175 exon MRP + chr2L 12741574 intron MRP + chr2L 12743972 intron MRP + chr2L_6_12740001 chr2L_12740001 RAL-304_75b 114 chr2L 12751310 12751339 chr2L 12751393 12751422 4 83 1.5 0.5 1.0 2.0 112 chr2L 12751310 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751422 intergenic not near genes chr2L_4_12750001 chr2L_12750001 RAL-304_75b 115 chr2L 12791601 12791614 chr2L 12795276 12795289 F-element 4 3675 3.5 2.0 2.8 1.1 3688 chr2L 12791601 intergenic not near genes chr2L 12793445 intergenic not near genes chr2L 12795289 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-304_75b 116 chr2L 12807439 12807456 chr2L 12807521 12807538 6 82 1.0 0.0 0.5 4.0 99 chr2L 12807439 intergenic CR43818 - chr2L 12807488 intergenic CR43818 - chr2L 12807538 intergenic CR43818 - chr2L_6_12805001 chr2L_12805001 RAL-304_75b 117 chr2L 12894021 12894049 chr2L 12895486 12895514 hobo 5 1466 1.0 0.0 0.5 3.3 1493 chr2L 12894021 intergenic not near genes chr2L 12894768 intergenic not near genes chr2L 12895514 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-304_75b 118 chr2L 13049383 13049416 chr2L 13049471 13049503 8 88 2.0 1.0 1.5 3.2 120 chr2L 13049383 intron CG9932 - chr2L 13049443 intron CG9932 - chr2L 13049503 intron CG9932 - chr2L_8_13045001 chr2L_13045001 RAL-304_75b 119 chr2L 13215401 13215411 chr2L 13215676 13215685 5 275 0.0 0.5 0.2 4.2 284 chr2L 13215401 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215543 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215685 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_5_13215001 chr2L_13215001 RAL-304_75b 120 chr2L 3266174 3266175 chr2L 13535107 13535107 4 10268932 9.5 4.5 7.0 0.5 10268933 chr2L 3266174 intergenic CR45706 - chr2L 8400640 exon CG31898 + chr2L 13535107 intron B4 - chr2L_4_8400001 chr2L_8400001 RAL-304_75b 121 chr2L 13622154 13622164 chr2L 13622252 13622263 5 98 0.5 0.0 0.2 4.2 109 chr2L 13622154 intron kuz + chr2L 13622208 intron kuz + chr2L 13622263 intron kuz + chr2L_5_13620001 chr2L_13620001 RAL-304_75b 122 chr2L 13754192 13754212 chr2L 13754270 13754292 5 79 0.0 1.0 0.5 3.3 100 chr2L 13754192 intron,intron CR44846 +,TM9SF4 + chr2L 13754242 intron,intron CR44846 +,TM9SF4 + chr2L 13754292 intron,intron CR44846 +,TM9SF4 + chr2L_5_13750001 chr2L_13750001 RAL-304_75b 123 chr2L 13800175 13800186 chr2L 13800279 13800289 4 104 0.5 0.0 0.2 3.3 114 chr2L 13800175 intergenic not near genes chr2L 13800232 intergenic not near genes chr2L 13800289 intergenic not near genes chr2L_4_13800001 chr2L_13800001 RAL-304_75b 124 chr2L 13853089 13853112 chr2L 13862239 13862262 roo 6 9149 1.5 1.0 1.2 2.7 9173 chr2L 13853089 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862262 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-304_75b 125 chr2L 13981521 13981553 chr2L 13981612 13981644 4 91 2.5 0.0 1.2 1.8 123 chr2L 13981521 exon NimC2 + chr2L 13981582 intron NimC2 + chr2L 13981644 intron NimC2 + chr2L_4_13980001 chr2L_13980001 RAL-304_75b 126 chr2L 14121802 14121810 chr2L 14121884 14121893 7 82 0.0 4.5 2.2 2.2 91 chr2L 14121802 intergenic not near genes chr2L 14121848 intergenic not near genes chr2L 14121893 intergenic not near genes chr2L_7_14120001 chr2L_14120001 RAL-304_75b 127 chr2L 14160705 14160719 chr2L 14160790 14160805 6 85 2.5 3.5 3.0 1.5 100 chr2L 14160705 intergenic CG17341 +,CG43332 - chr2L 14160755 intergenic CG17341 +,CG43332 - chr2L 14160805 intergenic CG17341 +,CG43332 - chr2L_6_14160001 chr2L_14160001 RAL-304_75b 128 chr2L 14180081 14180093 chr2L 14180157 14180169 7 76 4.5 2.0 3.2 1.7 88 chr2L 14180081 intron CG43333 - chr2L 14180125 intron CG43333 - chr2L 14180169 intron CG43333 - chr2L_7_14180001 chr2L_14180001 RAL-304_75b 129 chr2L 14525575 14525600 chr2L 14525657 14525682 4 82 2.5 3.5 3.0 1.0 107 chr2L 14525575 exon CG33648 + chr2L 14525628 3` UTR CG33648 + chr2L 14525682 intergenic CG33648 + chr2L_4_14525001 chr2L_14525001 RAL-304_75b 130 chr2L 14588394 14588407 chr2L 14588546 14588561 6 154 0.0 0.0 0.0 6.0 167 chr2L 14588394 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588561 intergenic CG42680 - chr2L_6_14585001 chr2L_14585001 RAL-304_75b 131 chr2L 14681827 14681833 chr2L 14682029 14682038 5 204 3.0 3.5 3.2 1.2 211 chr2L 14681827 intron osp - chr2L 14681932 intron osp - chr2L 14682038 intron osp - chr2L_5_14680001 chr2L_14680001 RAL-304_75b 132 chr2L 14707217 14707238 chr2L 14707334 14707357 7 119 0.5 2.0 1.2 3.2 140 chr2L 14707217 intergenic not near genes chr2L 14707287 intergenic not near genes chr2L 14707357 intergenic not near genes chr2L_7_14705001 chr2L_14705001 RAL-304_75b 133 chr2L 14840975 14840997 chr2L 14841062 14841084 4 86 0.5 0.5 0.5 2.7 109 chr2L 14840975 3` UTR CR43805 - chr2L 14841030 3` UTR CR43805 - chr2L 14841084 3` UTR CR43805 - chr2L_4_14840001 chr2L_14840001 RAL-304_75b 134 chr2L 14984378 14984402 chr2L 14991979 14992003 opus 4 7602 1.5 0.0 0.8 2.2 7625 chr2L 14984378 intron mol - chr2L 14988190 intron mol - chr2L 14992003 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-304_75b 135 chr2L 15026029 15026047 chr2L 15026110 15026127 5 81 2.0 1.5 1.8 1.8 98 chr2L 15026029 exon GABA-B-R1 + chr2L 15026078 intron GABA-B-R1 + chr2L 15026127 intron GABA-B-R1 + chr2L_5_15025001 chr2L_15025001 RAL-304_75b 136 chr2L 415923 415924 chr2L 15097661 15097664 4 14681738 2.5 7.5 5.0 0.7 14681741 chr2L 415923 exon ebi + chr2L 7756794 intron,exon CG7196 +,CG14538 + chr2L 15097664 intergenic not near genes chr2L_4_7755001 chr2L_7755001 RAL-304_75b 137 chr2L 15346058 15346076 chr2L 15346135 15346153 5 77 2.0 1.5 1.8 1.8 95 chr2L 15346058 intergenic not near genes chr2L 15346106 intergenic not near genes chr2L 15346153 intergenic not near genes chr2L_5_15345001 chr2L_15345001 RAL-304_75b 138 chr2L 15446049 15446084 chr2L 15453518 15453552 blood 6 7469 0.0 0.5 0.2 5.0 7503 chr2L 15446049 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453552 intergenic not near genes chr2L_6_15445001 chr2L_15445001 RAL-304_75b 139 chr2L 15586419 15586428 chr2L 15593471 15593479 297 5 7052 2.5 3.0 2.8 1.3 7060 chr2L 15586419 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593479 intergenic not near genes chr2L_5_15585001 chr2L_15585001 RAL-304_75b 140 chr2L 16005605 16005618 chr2L 16005691 16005704 4 86 0.0 0.0 0.0 4.0 99 chr2L 16005605 intron beat-Ic + chr2L 16005654 intron beat-Ic + chr2L 16005704 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-304_75b 141 chr2L 16141168 16141193 chr2L 16146375 16146400 copia 5 5207 2.0 1.5 1.8 1.8 5232 chr2L 16141168 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146400 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-304_75b 142 chr2L 16234428 16234451 chr2L 16234507 16234530 7 79 2.0 0.0 1.0 3.5 102 chr2L 16234428 intron CG42817 + chr2L 16234479 intron CG42817 + chr2L 16234530 intron CG42817 + chr2L_7_16230001 chr2L_16230001 RAL-304_75b 143 chr2L 16363943 16363975 chr2L 16364189 16364221 6 246 0.5 0.0 0.2 5.0 278 chr2L 16363943 intergenic not near genes chr2L 16364082 intergenic not near genes chr2L 16364221 intergenic not near genes chr2L_6_16360001 chr2L_16360001 RAL-304_75b 144 chr2L 16504994 16505014 chr2L 16505104 16505123 19 110 0.0 0.5 0.2 15.8 129 chr2L 16504994 intron Tpr2 + chr2L 16505058 intron Tpr2 + chr2L 16505123 intron Tpr2 + chr2L_19_16505001 chr2L_16505001 RAL-304_75b 145 chr2L 16697073 16697087 chr2L 16697266 16697279 5 193 0.0 0.0 0.0 5.0 206 chr2L 16697073 intron grp + chr2L 16697176 intron grp + chr2L 16697279 intron grp + chr2L_5_16695001 chr2L_16695001 RAL-304_75b 146 chr2L 16796409 16796434 chr2L 16796513 16796539 12 104 1.5 0.5 1.0 6.0 130 chr2L 16796409 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796474 intergenic Ugt36Bb +,Ugt36Ba + chr2L 16796539 intergenic Ugt36Bb + chr2L_12_16795001 chr2L_16795001 RAL-304_75b 147 chr2L 16920012 16920030 chr2L 16920091 16920109 5 79 2.5 1.0 1.8 1.8 97 chr2L 16920012 intergenic not near genes chr2L 16920060 intergenic not near genes chr2L 16920109 intergenic not near genes chr2L_5_16920001 chr2L_16920001 RAL-304_75b 148 chr2L 16949616 16949646 chr2L 16949700 16949729 7 84 0.0 0.0 0.0 7.0 113 chr2L 16949616 intron CR44393 - chr2L 16949672 intron CR44393 - chr2L 16949729 intron CR44393 - chr2L_7_16945001 chr2L_16945001 RAL-304_75b 149 chr2L 16952137 16952143 chr2L 16952223 16952229 6 85 0.0 1.5 0.8 3.3 92 chr2L 16952137 intergenic not near genes chr2L 16952183 intergenic not near genes chr2L 16952229 intergenic not near genes chr2L_6_16950001 chr2L_16950001 RAL-304_75b 150 chr2L 16958103 16958134 chr2L 16962890 16962922 Doc 4 4788 2.0 0.0 1.0 2.0 4819 chr2L 16958103 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962922 intergenic not near genes chr2L_4_16960001 chr2L_16960001 RAL-304_75b 151 chr2L 16968241 16968262 chr2L 16968330 16968352 5 89 0.0 0.5 0.2 4.2 111 chr2L 16968241 intergenic not near genes chr2L 16968296 intergenic not near genes chr2L 16968352 intergenic not near genes chr2L_5_16965001 chr2L_16965001 RAL-304_75b 152 chr2L 17033917 17033939 chr2L 17034003 17034025 8 86 2.0 0.0 1.0 4.0 108 chr2L 17033917 intergenic not near genes chr2L 17033971 intergenic not near genes chr2L 17034025 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-304_75b 153 chr2L 17050019 17050046 chr2L 17050104 17050131 7 86 0.0 1.0 0.5 4.7 112 chr2L 17050019 intergenic not near genes chr2L 17050075 intergenic not near genes chr2L 17050131 intergenic not near genes chr2L_7_17050001 chr2L_17050001 RAL-304_75b 154 chr2L 17052440 17052442 chr2L 17052552 17052553 4 111 0.0 1.5 0.8 2.2 113 chr2L 17052440 intergenic not near genes chr2L 17052496 intergenic not near genes chr2L 17052553 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-304_75b 155 chr2L 17122780 17122809 chr2L 17122865 17122894 5 85 0.0 0.5 0.2 4.2 114 chr2L 17122780 intergenic not near genes chr2L 17122837 intergenic CG31784 - chr2L 17122894 intergenic CG31784 - chr2L_5_17120001 chr2L_17120001 RAL-304_75b 156 chr2L 17199165 17199185 chr2L 17200632 17200652 hobo 4 1467 1.0 1.0 1.0 2.0 1487 chr2L 17199165 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200652 intron beat-IIIc - chr2L_4_17195001 chr2L_17195001 RAL-304_75b 157 chr2L 17261223 17261247 chr2L 17261313 17261338 4 91 0.0 3.5 1.8 1.4 115 chr2L 17261223 intergenic beat-IIIc - chr2L 17261280 intergenic not near genes chr2L 17261338 intergenic not near genes chr2L_4_17260001 chr2L_17260001 RAL-304_75b 158 chr2L 17264746 17264778 chr2L 17264826 17264858 4 80 0.5 0.0 0.2 3.3 112 chr2L 17264746 intergenic not near genes chr2L 17264802 intergenic not near genes chr2L 17264858 intergenic not near genes chr2L_4_17260001 chr2L_17260001 RAL-304_75b 159 chr2L 17273192 17273197 chr2L 17277974 17277980 F-element 5 4782 3.0 0.0 1.5 2.0 4788 chr2L 17273192 intergenic not near genes chr2L 17275586 intergenic not near genes chr2L 17277980 intergenic not near genes chr2L_5_17275001 chr2L_17275001 RAL-304_75b 160 chr2L 17292903 17292910 chr2L 17292978 17292988 5 77 1.5 1.0 1.2 2.3 85 chr2L 17292903 intergenic not near genes chr2L 17292946 intergenic not near genes chr2L 17292988 intergenic not near genes chr2L_5_17290001 chr2L_17290001 RAL-304_75b 161 chr2L 17319126 17319149 chr2L 17319200 17319225 4 76 0.0 1.0 0.5 2.7 99 chr2L 17319126 3` UTR CR45696 - chr2L 17319176 3` UTR CR45696 - chr2L 17319225 3` UTR CR45696 - chr2L_4_17315001 chr2L_17315001 RAL-304_75b 162 chr2L 17380476 17380480 chr2L 17380746 17380750 4 270 0.0 2.5 1.2 1.8 274 chr2L 17380476 intron Lrch - chr2L 17380613 intron Lrch - chr2L 17380750 intron Lrch - chr2L_4_17380001 chr2L_17380001 RAL-304_75b 163 chr2L 17466424 17466456 chr2L 17466517 17466549 6 92 0.0 2.0 1.0 3.0 125 chr2L 17466424 intron BicD - chr2L 17466486 intron BicD - chr2L 17466549 intron BicD - chr2L_6_17465001 chr2L_17465001 RAL-304_75b 164 chr2L 17727870 17727882 chr2L 17729337 17729349 hobo 6 1467 0.0 2.5 1.2 2.7 1479 chr2L 17727870 intron CadN - chr2L 17728610 intron CadN - chr2L 17729349 intron CadN - chr2L_6_17725001 chr2L_17725001 RAL-304_75b 165 chr2L 17819920 17819951 chr2L 17825123 17825154 copia 8 5203 0.5 1.0 0.8 4.4 5234 chr2L 17819920 intron CadN2 - chr2L 17822537 intron CadN2 - chr2L 17825154 intron CadN2 - chr2L_8_17820001 chr2L_17820001 RAL-304_75b 166 chr2L 17880005 17880023 chr2L 17880091 17880110 6 87 2.0 2.0 2.0 2.0 105 chr2L 17880005 intergenic not near genes chr2L 17880058 intergenic not near genes chr2L 17880110 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-304_75b 167 chr2L 17911978 17911986 chr2L 17914156 17914163 pogo 5 2177 2.0 8.5 5.2 0.8 2185 chr2L 17911978 intergenic not near genes chr2L 17913070 intergenic not near genes chr2L 17914163 intergenic CG43271 - chr2L_5_17910001 chr2L_17910001 RAL-304_75b 168 chr2L 17951956 17951967 chr2L 17953420 17953434 hobo 9 1466 8.5 1.5 5.0 1.5 1478 chr2L 17951956 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953434 intergenic not near genes chr2L_9_17950001 chr2L_17950001 RAL-304_75b 169 chr2L 18039897 18039900 chr2L 18039975 18039981 4 80 0.0 1.5 0.8 2.2 84 chr2L 18039897 intron rdo + chr2L 18039939 intron rdo + chr2L 18039981 intron rdo + chr2L_4_18035001 chr2L_18035001 RAL-304_75b 170 chr2L 18040816 18040846 chr2L 18040905 18040933 6 88 0.5 2.0 1.2 2.7 117 chr2L 18040816 intron rdo + chr2L 18040874 intron rdo + chr2L 18040933 intron rdo + chr2L_6_18040001 chr2L_18040001 RAL-304_75b 171 chr2L 18274051 18274057 chr2L 18274137 18274143 5 86 1.5 0.0 0.8 2.8 92 chr2L 18274051 intron CG42750 - chr2L 18274097 intron CG42750 - chr2L 18274143 intron CG42750 - chr2L_5_18270001 chr2L_18270001 RAL-304_75b 172 chr2L 18291528 18291560 chr2L 18291625 18291658 15 98 0.0 0.0 0.0 15.0 130 chr2L 18291528 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291593 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291658 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_15_18290001 chr2L_18290001 RAL-304_75b 173 chr2L 18354674 18354694 chr2L 18354759 18354779 4 85 0.0 1.0 0.5 2.7 105 chr2L 18354674 intron Fas3 + chr2L 18354726 intron Fas3 + chr2L 18354779 intron Fas3 + chr2L_4_18350001 chr2L_18350001 RAL-304_75b 174 chr2L 18408049 18408056 chr2L 18412833 18412840 Doc 5 4784 0.0 0.0 0.0 5.0 4791 chr2L 18408049 intergenic not near genes chr2L 18410444 intergenic not near genes chr2L 18412840 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-304_75b 175 chr2L 18439168 18439188 chr2L 18439328 18439348 5 160 4.5 2.0 3.2 1.2 180 chr2L 18439168 intergenic not near genes chr2L 18439258 intergenic not near genes chr2L 18439348 intergenic not near genes chr2L_5_18435001 chr2L_18435001 RAL-304_75b 176 chr2L 18538581 18538594 chr2L 18538662 18538675 6 81 0.0 1.0 0.5 4.0 94 chr2L 18538581 intron Pde11 - chr2L 18538628 intron Pde11 - chr2L 18538675 intron Pde11 - chr2L_6_18535001 chr2L_18535001 RAL-304_75b 177 chr2L 18551942 18551958 chr2L 18552225 18552241 8 282 0.0 0.0 0.0 8.0 299 chr2L 18551942 intron Pde11 - chr2L 18552092 intron Pde11 - chr2L 18552241 intron Pde11 - chr2L_8_18550001 chr2L_18550001 RAL-304_75b 178 chr2L 18811404 18811408 chr2L 18811486 18811490 4 82 1.0 0.0 0.5 2.7 86 chr2L 18811404 intergenic CG10570 -,CG42502 - chr2L 18811447 intergenic CG10570 -,CG42502 - chr2L 18811490 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-304_75b 179 chr2L 19016252 19016273 chr2L 19016348 19016369 6 96 2.5 0.5 1.5 2.4 117 chr2L 19016252 intergenic not near genes chr2L 19016310 intergenic not near genes chr2L 19016369 intergenic not near genes chr2L_6_19015001 chr2L_19015001 RAL-304_75b 180 chr2L 19121045 19121059 chr2L 19121123 19121137 9 78 2.0 1.0 1.5 3.6 92 chr2L 19121045 intergenic l(2)37Cc - chr2L 19121091 intergenic l(2)37Cc - chr2L 19121137 intergenic l(2)37Cc - chr2L_9_19120001 chr2L_19120001 RAL-304_75b 181 chr2L 19270917 19270920 chr2L 19271007 19271010 4 89 0.0 9.0 4.5 0.7 93 chr2L 19270917 intron CR44190 - chr2L 19270964 intron CR44190 - chr2L 19271010 intron CR44190 - chr2L_4_19270001 chr2L_19270001 RAL-304_75b 182 chr2L 19345020 19345046 chr2L 19357229 19357254 blood 5 12209 0.5 0.5 0.5 3.3 12234 chr2L 19345020 intron dnt - chr2L 19351137 intron dnt - chr2L 19357254 intron dnt - chr2L_5_19350001 chr2L_19350001 RAL-304_75b 183 chr2L 19374494 19374517 chr2L 19374600 19374626 4 107 0.5 0.5 0.5 2.7 132 chr2L 19374494 intergenic not near genes chr2L 19374560 intergenic not near genes chr2L 19374626 intergenic not near genes chr2L_4_19370001 chr2L_19370001 RAL-304_75b 184 chr2L 19560836 19560861 chr2L 19560916 19560941 4 80 2.0 0.0 1.0 2.0 105 chr2L 19560836 intron Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560941 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-304_75b 185 chr2L 19579102 19579117 chr2L 19579183 19579197 7 81 0.0 1.5 0.8 3.9 95 chr2L 19579102 3` UTR,3` UTR msb1l +,CG10268 - chr2L 19579150 3` UTR CG10268 - chr2L 19579197 3` UTR CG10268 - chr2L_7_19575001 chr2L_19575001 RAL-304_75b 186 chr2L 19620120 19620130 chr2L 19621109 19621119 jockey 5 988 0.0 1.0 0.5 3.3 999 chr2L 19620120 intron Lar + chr2L 19620620 intron Lar + chr2L 19621119 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-304_75b 187 chr2L 19703544 19703558 chr2L 19712680 19712692 roo 7 9135 0.5 1.0 0.8 3.9 9148 chr2L 19703544 intron Lar + chr2L 19708118 intron Lar + chr2L 19712692 intron Lar + chr2L_7_19705001 chr2L_19705001 RAL-304_75b 188 chr2L 19737358 19737389 chr2L 19740827 19740858 1360 8 3468 0.0 2.5 1.2 3.6 3500 chr2L 19737358 intergenic Nf-YB + chr2L 19739108 intergenic not near genes chr2L 19740858 intergenic not near genes chr2L_8_19735001 chr2L_19735001 RAL-304_75b 189 chr2L 19773163 19773185 chr2L 19773250 19773272 5 87 0.0 0.5 0.2 4.2 109 chr2L 19773163 intergenic not near genes chr2L 19773218 intergenic not near genes chr2L 19773272 intergenic not near genes chr2L_5_19770001 chr2L_19770001 RAL-304_75b 190 chr2L 19837275 19837305 chr2L 19837355 19837385 8 80 4.0 1.5 2.8 2.1 110 chr2L 19837275 intron sick + chr2L 19837330 intron sick + chr2L 19837385 intron sick + chr2L_8_19835001 chr2L_19835001 RAL-304_75b 191 chr2L 19846252 19846272 chr2L 19846333 19846352 5 80 0.0 2.5 1.2 2.3 100 chr2L 19846252 intron sick + chr2L 19846302 intron sick + chr2L 19846352 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-304_75b 192 chr2L 19901490 19901517 chr2L 19901592 19901619 8 102 0.0 1.5 0.8 4.4 129 chr2L 19901490 intron sick + chr2L 19901554 intron sick + chr2L 19901619 intron sick + chr2L_8_19900001 chr2L_19900001 RAL-304_75b 193 chr2L 20067583 20067612 chr2L 20067688 20067717 17 105 0.0 0.0 0.0 17.0 134 chr2L 20067583 intron bwa + chr2L 20067650 intron bwa + chr2L 20067717 intron bwa + chr2L_17_20065001 chr2L_20065001 RAL-304_75b 194 chr2L 20085468 20085480 chr2L 20085560 20085572 5 91 0.0 0.5 0.2 4.2 104 chr2L 20085468 intron neb + chr2L 20085520 intron neb + chr2L 20085572 intron neb + chr2L_5_20085001 chr2L_20085001 RAL-304_75b 195 chr2L 20298839 20298849 chr2L 20298919 20298932 4 82 2.0 3.0 2.5 1.1 93 chr2L 20298839 intergenic not near genes chr2L 20298886 intergenic not near genes chr2L 20298932 intergenic not near genes chr2L_4_20295001 chr2L_20295001 RAL-304_75b 196 chr2L 20383439 20383441 chr2L 20383531 20383533 4 92 5.5 1.5 3.5 0.9 94 chr2L 20383439 intergenic not near genes chr2L 20383486 intergenic not near genes chr2L 20383533 intergenic not near genes chr2L_4_20380001 chr2L_20380001 RAL-304_75b 197 chr2L 20549402 20549421 chr2L 20550071 20550090 8 668 1.5 0.5 1.0 4.0 688 chr2L 20549402 intergenic not near genes chr2L 20549746 intergenic not near genes chr2L 20550090 intergenic not near genes chr2L_8_20545001 chr2L_20545001 RAL-304_75b 198 chr2L 20568666 20568682 chr2L 20569056 20569071 X-element 5 390 1.0 1.5 1.2 2.3 405 chr2L 20568666 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569071 intron CR45347 + chr2L_5_20565001 chr2L_20565001 RAL-304_75b 199 chr2L 20576224 20576247 chr2L 20583689 20583715 blood 7 7467 2.0 7.5 4.8 1.2 7491 chr2L 20576224 intergenic not near genes chr2L 20579970 intergenic not near genes chr2L 20583715 3` UTR CR44909 - chr2L_7_20575001 chr2L_20575001 RAL-304_75b 200 chr2L 20614538 20614547 chr2L 20614618 20614628 7 81 0.5 1.0 0.8 3.9 90 chr2L 20614538 intron,5` UTR CR44909 -,CG15475 + chr2L 20614583 intron,5` UTR CR44909 -,CG15475 + chr2L 20614628 intron,5` UTR CR44909 -,CG15475 + chr2L_7_20610001 chr2L_20610001 RAL-304_75b 201 chr2L 20668697 20668711 chr2L 20668773 20668787 6 75 3.0 2.5 2.8 1.6 90 chr2L 20668697 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668787 intron CG31678 - chr2L_6_20665001 chr2L_20665001 RAL-304_75b 202 chr2L 20835826 20835837 chr2L 20836542 20836554 Quasimodo 5 716 0.5 2.5 1.5 2.0 728 chr2L 20835826 5` UTR Oseg5 - chr2L 20836190 intergenic Oseg5 -,Spn38F - chr2L 20836554 intergenic Spn38F - chr2L_5_20835001 chr2L_20835001 RAL-304_75b 203 chr2L 20901475 20901475 chr2L 20902639 20902639 1360 4 1164 0.5 1.5 1.0 2.0 1164 chr2L 20901475 intron,intron CG43739 -,sky - chr2L 20902057 intron,intron CG43739 -,sky - chr2L 20902639 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-304_75b 204 chr2L 20934601 20934629 chr2L 20934796 20934824 4 195 2.5 1.0 1.8 1.4 223 chr2L 20934601 intergenic CG9270 - chr2L 20934712 intergenic not near genes chr2L 20934824 intergenic not near genes chr2L_4_20930001 chr2L_20930001 RAL-304_75b 205 chr2L 20976643 20976675 chr2L 20981458 20981490 X-element 9 4815 2.0 0.5 1.2 4.1 4847 chr2L 20976643 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981490 intron CG42238 - chr2L_9_20975001 chr2L_20975001 RAL-304_75b 206 chr2L 21286618 21286627 chr2L 21286696 21286705 4 78 1.5 3.0 2.2 1.2 87 chr2L 21286618 exon Mio - chr2L 21286662 intron Mio - chr2L 21286705 intron Mio - chr2L_4_21285001 chr2L_21285001 RAL-304_75b 207 chr2L 21653191 21653225 chr2L 21656495 21656529 invader4 5 3304 0.5 0.5 0.5 3.3 3338 chr2L 21653191 intergenic not near genes chr2L 21654860 intergenic not near genes chr2L 21656529 intergenic not near genes chr2L_5_21650001 chr2L_21650001 RAL-304_75b 208 chr2L 21691825 21691853 chr2L 21698295 21698320 Burdock 8 6469 0.0 1.0 0.5 5.3 6495 chr2L 21691825 intron CG31619 + chr2L 21695072 intron CG31619 + chr2L 21698320 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-304_75b 209 chr2L 21754660 21754670 chr2L 21754741 21754749 6 81 1.0 1.0 1.0 3.0 89 chr2L 21754660 intron step - chr2L 21754704 intron step - chr2L 21754749 intron step - chr2L_6_21750001 chr2L_21750001 RAL-304_75b 210 chr2L 21757576 21757586 chr2L 21757657 21757667 8 80 1.0 0.0 0.5 5.3 91 chr2L 21757576 intergenic step -,CG1416 + chr2L 21757622 intergenic step -,CG1416 + chr2L 21757667 intergenic step -,CG1416 + chr2L_8_21755001 chr2L_21755001 RAL-304_75b 211 chr2L 21859340 21859343 chr2L 21859420 21859423 7 80 1.5 3.5 2.5 2.0 83 chr2L 21859340 intron CR44917 + chr2L 21859382 intron CR44917 + chr2L 21859423 intron CR44917 + chr2L_7_21855001 chr2L_21855001 RAL-304_75b 212 chr2L 21953809 21953819 chr2L 21954710 21954720 7 902 13.0 13.0 13.0 0.5 911 chr2L 21953809 intergenic not near genes chr2L 21954264 intergenic not near genes chr2L 21954720 intergenic not near genes chr2L_7_21950001 chr2L_21950001 RAL-304_75b 213 chr2L 22165716 22165744 chr2L 22165798 22165826 4 82 0.0 0.0 0.0 4.0 110 chr2L 22165716 3` UTR CG42748 + chr2L 22165771 3` UTR,3` UTR CG42748 +,Clamp - chr2L 22165826 3` UTR,3` UTR CG42748 +,Clamp - chr2L_4_22165001 chr2L_22165001 RAL-304_75b 214 chr2L 22192026 22192057 chr2L 22192114 22192146 4 88 1.5 1.5 1.5 1.6 120 chr2L 22192026 intron Ir40a - chr2L 22192086 intron Ir40a - chr2L 22192146 intron Ir40a - chr2L_4_22190001 chr2L_22190001 RAL-304_75b 215 chr2L 22214533 22214543 chr2L 22214625 22214635 5 92 0.0 3.0 1.5 2.0 102 chr2L 22214533 intergenic Ir40a - chr2L 22214584 intergenic Ir40a - chr2L 22214635 intergenic Ir40a - chr2L_5_22210001 chr2L_22210001 RAL-304_75b 216 chr2L 22679810 22679823 chr2L 22684582 22684595 F-element 4 4772 1.5 6.5 4.0 0.8 4785 chr2L 22679810 intron CG40006 - chr2L 22682202 intron CG40006 - chr2L 22684595 intron CG40006 - chr2L_4_22680001 chr2L_22680001 RAL-304_75b 217 chr2L 22693921 22693944 chr2L 22694008 22694031 5 87 1.5 0.0 0.8 2.8 110 chr2L 22693921 intron CG40006 - chr2L 22693976 intron CG40006 - chr2L 22694031 intron CG40006 - chr2L_5_22690001 chr2L_22690001 RAL-304_75b 218 chr2L 22776423 22776451 chr2L 22778212 22778238 S-element 6 1788 0.0 0.0 0.0 6.0 1815 chr2L 22776423 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778238 intergenic not near genes chr2L_6_22775001 chr2L_22775001 RAL-304_75b 219 chr2R 529321 529352 chr2R 537946 537977 Max-element 7 8625 1.0 2.0 1.5 2.8 8656 chr2R 529321 intron CG40378 + chr2R 533649 intron CG40378 + chr2R 537977 intron CG40378 + chr2R_7_530001 chr2R_530001 RAL-304_75b 220 chr2R 552762 552779 chr2R 553979 553995 1360 5 1217 0.0 0.5 0.2 4.2 1233 chr2R 552762 intron CG40378 + chr2R 553378 intron CG40378 + chr2R 553995 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-304_75b 221 chr2R 1082384 1082385 chr2R 1087160 1087160 Doc 4 4776 2.0 4.5 3.2 1.0 4776 chr2R 1082384 intron rl + chr2R 1084772 intron rl + chr2R 1087160 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-304_75b 222 chr2R 2499010 2499012 chr2R 2508157 2508157 roo 9 9146 0.0 0.0 0.0 9.0 9147 chr2R 2499010 intron MFS17 - chr2R 2503584 intron MFS17 - chr2R 2508157 intron MFS17 - chr2R_9_2500001 chr2R_2500001 RAL-304_75b 223 chr2R 3144094 3144104 chr2R 3393372 3393382 Doc 6 249278 6.5 8.0 7.2 0.7 249288 chr2R 3144094 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393382 intergenic not near genes chr2R_6_3265001 chr2R_3265001 RAL-304_75b 224 chr2R 4387301 4387302 chr2R 4387452 4387453 6 151 1.5 0.0 0.8 3.3 152 chr2R 4387301 intron Gprk1 - chr2R 4387377 intron Gprk1 - chr2R 4387453 intron Gprk1 - chr2R_6_4385001 chr2R_4385001 RAL-304_75b 225 chr2R 4621336 4621336 chr2R 4621875 4621876 6 540 4.5 1.5 3.0 1.5 540 chr2R 4621336 3` UTR CR44101 - chr2R 4621606 3` UTR CR44101 - chr2R 4621876 3` UTR CR44101 - chr2R_6_4620001 chr2R_4620001 RAL-304_75b 226 chr2R 4656712 4656746 chr2R 4656813 4656847 5 101 7.0 5.0 6.0 0.7 135 chr2R 4656712 intergenic not near genes chr2R 4656780 intergenic not near genes chr2R 4656847 intergenic not near genes chr2R_5_4655001 chr2R_4655001 RAL-304_75b 227 chr2R 4783367 4783432 chr2R 4783451 4783508 7 80 0.0 0.0 0.0 7.0 141 chr2R 4783367 intergenic not near genes chr2R 4783438 intergenic not near genes chr2R 4783508 intergenic not near genes chr2R_7_4780001 chr2R_4780001 RAL-304_75b 228 chr2R 4916117 4916117 chr2R 4916195 4916195 4 78 2.5 10.0 6.2 0.6 78 chr2R 4916117 intergenic not near genes chr2R 4916156 intergenic not near genes chr2R 4916195 intergenic not near genes chr2R_4_4915001 chr2R_4915001 RAL-304_75b 229 chr2R 4940961 4940977 chr2R 4943411 4943427 4 2450 2.0 0.0 1.0 2.0 2466 chr2R 4940961 intron Ir41a + chr2R 4942194 intron Ir41a + chr2R 4943427 intron Ir41a + chr2R_4_4940001 chr2R_4940001 RAL-304_75b 230 chr2R 5144985 5145010 chr2R 5145226 5145251 9 241 2.0 3.0 2.5 2.6 266 chr2R 5144985 intron Atf6 + chr2R 5145118 intron Atf6 + chr2R 5145251 intron Atf6 + chr2R_9_5145001 chr2R_5145001 RAL-304_75b 231 chr2R 5179968 5179983 chr2R 5180100 5180115 9 133 0.0 3.0 1.5 3.6 147 chr2R 5179968 intron Nipped-A - chr2R 5180042 intron Nipped-A - chr2R 5180115 intron Nipped-A - chr2R_9_5180001 chr2R_5180001 RAL-304_75b 232 chr2R 5363503 5363506 chr2R 5363581 5363584 6 78 2.0 1.5 1.8 2.1 81 chr2R 5363503 intron CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363584 intron CR42646 + chr2R_6_5360001 chr2R_5360001 RAL-304_75b 233 chr2R 5460520 5460551 chr2R 5460624 5460655 7 103 0.5 0.5 0.5 4.7 135 chr2R 5460520 intergenic not near genes chr2R 5460588 intergenic not near genes chr2R 5460655 intergenic not near genes chr2R_7_5460001 chr2R_5460001 RAL-304_75b 234 chr2R 5790471 5790497 chr2R 5790556 5790582 4 85 1.0 0.0 0.5 2.7 111 chr2R 5790471 intergenic not near genes chr2R 5790526 intergenic not near genes chr2R 5790582 intergenic not near genes chr2R_4_5790001 chr2R_5790001 RAL-304_75b 235 chr2R 5886675 5886678 chr2R 5886796 5886799 5 121 4.0 1.5 2.8 1.3 124 chr2R 5886675 intergenic CR44125 + chr2R 5886737 intergenic CR44125 + chr2R 5886799 intergenic CR44125 + chr2R_5_5885001 chr2R_5885001 RAL-304_75b 236 chr2R 6236216 6236228 chr2R 6236302 6236316 10 87 4.0 0.0 2.0 3.3 100 chr2R 6236216 intron bin3 + chr2R 6236266 intron bin3 + chr2R 6236316 intron bin3 + chr2R_10_6235001 chr2R_6235001 RAL-304_75b 237 chr2R 6493381 6493387 chr2R 6493485 6493492 4 104 9.0 11.0 10.0 0.4 111 chr2R 6493381 intergenic not near genes chr2R 6493436 intergenic not near genes chr2R 6493492 intergenic not near genes chr2R_4_6490001 chr2R_6490001 RAL-304_75b 238 chr2R 6500956 6500959 chr2R 6501051 6501054 4 94 1.0 0.0 0.5 2.7 98 chr2R 6500956 intergenic not near genes chr2R 6501005 intergenic not near genes chr2R 6501054 intergenic not near genes chr2R_4_6500001 chr2R_6500001 RAL-304_75b 239 chr2R 6579774 6579798 chr2R 6584857 6584884 flea 4 5085 2.0 0.0 1.0 2.0 5110 chr2R 6579774 intron jing + chr2R 6582329 intron jing + chr2R 6584884 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-304_75b 240 chr2R 6691149 6691152 chr2R 6691228 6691231 6 79 0.0 4.0 2.0 2.0 82 chr2R 6691149 intron CG9422 + chr2R 6691190 intron CG9422 + chr2R 6691231 intron CG9422 + chr2R_6_6690001 chr2R_6690001 RAL-304_75b 241 chr2R 6895409 6895427 chr2R 6895488 6895506 7 79 2.0 3.5 2.8 1.8 97 chr2R 6895409 intron CG30158 + chr2R 6895458 intron CG30158 + chr2R 6895506 intron CG30158 + chr2R_7_6895001 chr2R_6895001 RAL-304_75b 242 chr2R 6952180 6952182 chr2R 6959759 6959762 opus 4 7580 1.0 2.0 1.5 1.6 7582 chr2R 6952180 intron,intron mim -,CheB42c - chr2R 6955971 intron,intron mim -,CheB42c - chr2R 6959762 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-304_75b 243 chr2R 7209868 7209868 chr2R 7217615 7217616 roo 5 7748 3.5 3.0 3.2 1.2 7748 chr2R 7209868 intron pk + chr2R 7213742 intron pk + chr2R 7217616 intron pk + chr2R_5_7210001 chr2R_7210001 RAL-304_75b 244 chr2R 7554105 7554131 chr2R 7554192 7554218 4 87 1.5 1.5 1.5 1.6 113 chr2R 7554105 intron Corin + chr2R 7554162 intron Corin + chr2R 7554218 intron Corin + chr2R_4_7550001 chr2R_7550001 RAL-304_75b 245 chr2R 7815673 7815705 chr2R 7822141 7822171 Burdock 5 6468 0.5 3.0 1.8 1.8 6498 chr2R 7815673 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822171 3` UTR cathD - chr2R_5_7815001 chr2R_7815001 RAL-304_75b 246 chr2R 7897150 7897150 chr2R 7897238 7897239 9 89 0.0 8.0 4.0 1.8 89 chr2R 7897150 intron CG30377 + chr2R 7897194 intron CG30377 + chr2R 7897239 intron CG30377 + chr2R_9_7895001 chr2R_7895001 RAL-304_75b 247 chr2R 8015652 8015682 chr2R 8017675 8017705 6 2022 1.0 2.0 1.5 2.4 2053 chr2R 8015652 intergenic mir-4981 + chr2R 8016678 intergenic not near genes chr2R 8017705 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-304_75b 248 chr2R 8089281 8089285 chr2R 8089367 8089371 6 86 1.0 2.0 1.5 2.4 90 chr2R 8089281 3` UTR sut2 + chr2R 8089326 intergenic sut2 +,sut3 + chr2R 8089371 intergenic sut2 +,sut3 + chr2R_6_8085001 chr2R_8085001 RAL-304_75b 249 chr2R 8121494 8121505 chr2R 8121582 8121593 8 87 0.0 2.0 1.0 4.0 99 chr2R 8121494 intron Asap - chr2R 8121544 intron Asap - chr2R 8121593 intron Asap - chr2R_8_8120001 chr2R_8120001 RAL-304_75b 250 chr2R 8398212 8398238 chr2R 8402990 8403019 Doc 4 4780 0.0 0.0 0.0 4.0 4807 chr2R 8398212 intron CG2121 - chr2R 8400616 intron CG2121 - chr2R 8403019 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-304_75b 251 chr2R 8489754 8489754 chr2R 8489832 8489833 4 78 1.0 1.0 1.0 2.0 79 chr2R 8489754 intron mtt - chr2R 8489794 intron mtt - chr2R 8489833 intron mtt - chr2R_4_8485001 chr2R_8485001 RAL-304_75b 252 chr2R 8714712 8714714 chr2R 8714799 8714799 4 86 0.0 1.0 0.5 2.7 87 chr2R 8714712 3` UTR PGRP-SC1b + chr2R 8714756 3` UTR PGRP-SC1b + chr2R 8714799 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-304_75b 253 chr2R 8722777 8722779 chr2R 8723018 8723019 pogo 4 241 2.0 1.5 1.8 1.4 242 chr2R 8722777 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723019 intron CG14767 - chr2R_4_8720001 chr2R_8720001 RAL-304_75b 254 chr2R 8755186 8755203 chr2R 8755649 8755666 5 462 0.0 2.5 1.2 2.3 480 chr2R 8755186 intron CG8740 + chr2R 8755426 intron CG8740 + chr2R 8755666 intron CG8740 + chr2R_5_8755001 chr2R_8755001 RAL-304_75b 255 chr2R 8777942 8777943 chr2R 8784146 8784146 diver 4 6204 0.5 0.0 0.2 3.3 6204 chr2R 8777942 intergenic not near genes chr2R 8781044 intergenic not near genes chr2R 8784146 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-304_75b 256 chr2R 8958404 8958427 chr2R 8958497 8958519 6 93 4.5 0.0 2.2 1.9 115 chr2R 8958404 intron babo + chr2R 8958462 intron babo + chr2R 8958519 intron babo + chr2R_6_8955001 chr2R_8955001 RAL-304_75b 257 chr2R 9212706 9212721 chr2R 9213192 9213207 roo 5 486 0.5 2.5 1.5 2.0 501 chr2R 9212706 intergenic CR45309 + chr2R 9212956 intergenic CR45309 + chr2R 9213207 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-304_75b 258 chr2R 9224327 9224338 chr2R 9224492 9224504 5 165 0.0 1.5 0.8 2.8 177 chr2R 9224327 intergenic not near genes chr2R 9224416 intergenic not near genes chr2R 9224504 intergenic not near genes chr2R_5_9220001 chr2R_9220001 RAL-304_75b 259 chr2R 9322384 9322401 chr2R 9322459 9322479 5 77 1.0 2.5 1.8 1.8 95 chr2R 9322384 intron,intron CG13739 -,CG13954 - chr2R 9322432 intron,intron CG13739 -,CG13954 - chr2R 9322479 intron,intron CG13739 -,CG13954 - chr2R_5_9320001 chr2R_9320001 RAL-304_75b 260 chr2R 9368126 9368155 chr2R 9368201 9368231 7 76 0.0 0.0 0.0 7.0 105 chr2R 9368126 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368231 intron CG13954 - chr2R_7_9365001 chr2R_9365001 RAL-304_75b 261 chr2R 9510665 9510693 chr2R 9510781 9510808 7 116 0.0 1.0 0.5 4.7 143 chr2R 9510665 intron brp + chr2R 9510736 intron brp + chr2R 9510808 intron brp + chr2R_7_9510001 chr2R_9510001 RAL-304_75b 262 chr2R 9699415 9699419 chr2R 9699502 9699505 4 87 2.0 0.5 1.2 1.8 90 chr2R 9699415 intergenic not near genes chr2R 9699460 intergenic not near genes chr2R 9699505 intergenic not near genes chr2R_4_9695001 chr2R_9695001 RAL-304_75b 263 chr2R 9726615 9726632 chr2R 9734165 9734183 17.6 5 7551 0.5 0.5 0.5 3.3 7568 chr2R 9726615 intron sqa - chr2R 9730399 intron sqa - chr2R 9734183 intron sqa - chr2R_5_9730001 chr2R_9730001 RAL-304_75b 264 chr2R 9863160 9863189 chr2R 9863252 9863281 4 92 1.0 0.0 0.5 2.7 121 chr2R 9863160 intergenic CG30010 + chr2R 9863220 intergenic CG30010 + chr2R 9863281 intergenic CG30010 + chr2R_4_9860001 chr2R_9860001 RAL-304_75b 265 chr2R 9954935 9954963 chr2R 9955016 9955041 10 81 0.0 1.5 0.8 5.6 106 chr2R 9954935 intron Mef2 - chr2R 9954988 intron Mef2 - chr2R 9955041 intron Mef2 - chr2R_10_9950001 chr2R_9950001 RAL-304_75b 266 chr2R 10132201 10132212 chr2R 10132281 10132292 6 80 0.5 2.5 1.5 2.4 91 chr2R 10132201 intron gem + chr2R 10132246 intron gem + chr2R 10132292 intron gem + chr2R_6_10130001 chr2R_10130001 RAL-304_75b 267 chr2R 10270571 10270591 chr2R 10270660 10270680 6 89 0.0 2.5 1.2 2.7 109 chr2R 10270571 intron CAP + chr2R 10270626 intron CAP + chr2R 10270680 intron CAP + chr2R_6_10270001 chr2R_10270001 RAL-304_75b 268 chr2R 10290116 10290130 chr2R 10290197 10290211 7 81 1.0 0.5 0.8 3.9 95 chr2R 10290116 intron CAP + chr2R 10290164 intron CAP + chr2R 10290211 intron CAP + chr2R_7_10290001 chr2R_10290001 RAL-304_75b 269 chr2R 10653212 10653227 chr2R 10653288 10653305 7 78 2.0 3.5 2.8 1.8 93 chr2R 10653212 intergenic not near genes chr2R 10653258 intergenic not near genes chr2R 10653305 intergenic not near genes chr2R_7_10650001 chr2R_10650001 RAL-304_75b 270 chr2R 10678494 10678520 chr2R 10678599 10678626 19 105 0.0 1.5 0.8 10.6 132 chr2R 10678494 intron stan + chr2R 10678560 intron stan + chr2R 10678626 intron stan + chr2R_19_10675001 chr2R_10675001 RAL-304_75b 271 chr2R 10790143 10790149 chr2R 10790231 10790231 7 87 5.0 1.0 3.0 1.8 88 chr2R 10790143 intron CG33144 - chr2R 10790187 intron CG33144 - chr2R 10790231 intron CG33144 - chr2R_7_10790001 chr2R_10790001 RAL-304_75b 272 chr2R 10796723 10796728 chr2R 10796822 10796826 4 99 3.0 1.0 2.0 1.3 103 chr2R 10796723 intron CG33144 - chr2R 10796774 intron CG33144 - chr2R 10796826 intron CG33144 - chr2R_4_10795001 chr2R_10795001 RAL-304_75b 273 chr2R 10947095 10947099 chr2R 10947182 10947186 4 87 0.5 0.0 0.2 3.3 91 chr2R 10947095 5` UTR CR45228 + chr2R 10947140 intergenic CR45228 + chr2R 10947186 intergenic CR45228 + chr2R_4_10945001 chr2R_10945001 RAL-304_75b 274 chr2R 11009820 11009844 chr2R 11018994 11019018 roo 8 9174 2.5 5.0 3.8 1.7 9198 chr2R 11009820 intron luna - chr2R 11014419 intron luna - chr2R 11019018 intron luna - chr2R_8_11010001 chr2R_11010001 RAL-304_75b 275 chr2R 11064720 11064729 chr2R 11064802 11064811 6 82 0.0 1.0 0.5 4.0 91 chr2R 11064720 intron luna - chr2R 11064766 intron luna - chr2R 11064811 intron luna - chr2R_6_11060001 chr2R_11060001 RAL-304_75b 276 chr2R 11415447 11415462 chr2R 11415522 11415538 7 75 1.0 1.0 1.0 3.5 91 chr2R 11415447 intron,3` UTR Drip -,CG7763 + chr2R 11415492 intron Drip - chr2R 11415538 intron Drip - chr2R_7_11415001 chr2R_11415001 RAL-304_75b 277 chr2R 11421675 11421690 chr2R 11421755 11421770 5 80 1.0 0.0 0.5 3.3 95 chr2R 11421675 intron Drip - chr2R 11421722 intron Drip - chr2R 11421770 intron Drip - chr2R_5_11420001 chr2R_11420001 RAL-304_75b 278 chr2R 12093952 12093975 chr2R 12094065 12094088 6 112 0.0 0.5 0.2 5.0 136 chr2R 12093952 intron jeb - chr2R 12094020 intron jeb - chr2R 12094088 intron jeb - chr2R_6_12090001 chr2R_12090001 RAL-304_75b 279 chr2R 12178922 12178945 chr2R 12179002 12179024 11 80 4.5 0.0 2.2 3.4 102 chr2R 12178922 intergenic CR45264 +,EndoG - chr2R 12178973 intergenic CR45264 +,EndoG - chr2R 12179024 5` UTR CR45264 + chr2R_11_12175001 chr2R_12175001 RAL-304_75b 280 chr2R 12187471 12187506 chr2R 12190089 12190122 15 2617 15.5 26.0 20.8 0.7 2651 chr2R 12187471 exon Cyp6g1 + chr2R 12188796 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_15_12185001 chr2R_12185001 RAL-304_75b 281 chr2R 12272329 12272355 chr2R 12272412 12272437 8 82 2.5 3.5 3.0 2.0 108 chr2R 12272329 intron Cam + chr2R 12272383 intron Cam + chr2R 12272437 intron Cam + chr2R_8_12270001 chr2R_12270001 RAL-304_75b 282 chr2R 12501704 12501721 chr2R 12503864 12503880 Rt1c 4 2161 0.0 2.5 1.2 1.8 2176 chr2R 12501704 intron fdl - chr2R 12502792 intron fdl - chr2R 12503880 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-304_75b 283 chr2R 12522104 12522110 chr2R 12522232 12522238 5 128 3.5 0.5 2.0 1.7 134 chr2R 12522104 intron CG33632 + chr2R 12522171 exon CG33632 + chr2R 12522238 exon CG33632 + chr2R_5_12520001 chr2R_12520001 RAL-304_75b 284 chr2R 12789296 12789328 chr2R 12797659 12797690 roo 6 8363 0.0 1.0 0.5 4.0 8394 chr2R 12789296 intron,3` UTR sca +,CR45137 - chr2R 12793493 intron,intron sca +,CR45137 - chr2R 12797690 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-304_75b 285 chr2R 13267060 13267081 chr2R 13267159 13267180 4 99 0.5 1.0 0.8 2.2 120 chr2R 13267060 intergenic not near genes chr2R 13267120 intergenic not near genes chr2R 13267180 intergenic not near genes chr2R_4_13265001 chr2R_13265001 RAL-304_75b 286 chr2R 13329484 13329488 chr2R 13329560 13329564 6 75 3.5 1.0 2.2 1.9 80 chr2R 13329484 3` UTR,3` UTR CR44206 -,mir-184 - chr2R 13329524 3` UTR CR44206 - chr2R 13329564 3` UTR CR44206 - chr2R_6_13325001 chr2R_13325001 RAL-304_75b 287 chr2R 13431488 13431519 chr2R 13431567 13431598 4 79 0.0 1.0 0.5 2.7 110 chr2R 13431488 intron CG42321 - chr2R 13431543 intron CG42321 - chr2R 13431598 intron CG42321 - chr2R_4_13430001 chr2R_13430001 RAL-304_75b 288 chr2R 13438865 13438882 chr2R 13440183 13440200 4 1318 4.0 19.5 11.8 0.3 1335 chr2R 13438865 5` UTR CG42321 - chr2R 13439532 3` UTR cnn - chr2R 13440200 exon cnn - chr2R_4_13435001 chr2R_13435001 RAL-304_75b 289 chr2R 13650026 13650026 chr2R 13650120 13650121 5 95 2.0 1.0 1.5 2.0 95 chr2R 13650026 intron fas + chr2R 13650074 intron fas + chr2R 13650121 intron fas + chr2R_5_13650001 chr2R_13650001 RAL-304_75b 290 chr2R 13768982 13769009 chr2R 13769078 13769108 6 98 0.0 2.5 1.2 2.7 126 chr2R 13768982 intergenic not near genes chr2R 13769045 intergenic not near genes chr2R 13769108 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-304_75b 291 chr2R 14033639 14033657 chr2R 14033720 14033739 5 82 0.0 0.5 0.2 4.2 100 chr2R 14033639 intron mam + chr2R 14033689 intron mam + chr2R 14033739 intron mam + chr2R_5_14030001 chr2R_14030001 RAL-304_75b 292 chr2R 14357555 14357561 chr2R 14357645 14357651 4 90 3.0 0.0 1.5 1.6 96 chr2R 14357555 intergenic CG8617 -,Arc1 - chr2R 14357603 intergenic CG8617 -,Arc1 - chr2R 14357651 intergenic Arc1 -,CG8617 - chr2R_4_14355001 chr2R_14355001 RAL-304_75b 293 chr2R 14393869 14393886 chr2R 14393950 14393971 9 84 0.0 2.0 1.0 4.5 102 chr2R 14393869 intergenic not near genes chr2R 14393920 intergenic not near genes chr2R 14393971 intergenic not near genes chr2R_9_14390001 chr2R_14390001 RAL-304_75b 294 chr2R 14400527 14400528 chr2R 14400606 14400607 5 79 3.0 0.5 1.8 1.8 80 chr2R 14400527 intergenic not near genes chr2R 14400567 intergenic not near genes chr2R 14400607 intergenic not near genes chr2R_5_14400001 chr2R_14400001 RAL-304_75b 295 chr2R 14538973 14538986 chr2R 14539047 14539062 4 75 0.0 2.5 1.2 1.8 89 chr2R 14538973 intron ttv + chr2R 14539018 intron ttv + chr2R 14539062 intron ttv + chr2R_4_14535001 chr2R_14535001 RAL-304_75b 296 chr2R 14873698 14873722 chr2R 14875216 14875240 7 1518 0.5 1.0 0.8 3.9 1542 chr2R 14873698 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874469 exon Cyp6a17 + chr2R 14875240 exon Cyp6a17 + chr2R_7_14870001 chr2R_14870001 RAL-304_75b 297 chr2R 14889211 14889223 chr2R 14897819 14897831 Max-element 7 8607 1.5 0.0 0.8 3.9 8620 chr2R 14889211 intergenic Cyp6a8 - chr2R 14893521 intergenic not near genes chr2R 14897831 intergenic not near genes chr2R_7_14890001 chr2R_14890001 RAL-304_75b 298 chr2R 14911719 14911720 chr2R 14911842 14911842 4 123 1.5 1.5 1.5 1.6 123 chr2R 14911719 intron CG10249 - chr2R 14911780 intron CG10249 - chr2R 14911842 intron CG10249 - chr2R_4_14910001 chr2R_14910001 RAL-304_75b 299 chr2R 15008623 15008638 chr2R 15008743 15008758 6 120 2.5 4.0 3.2 1.4 135 chr2R 15008623 intergenic not near genes chr2R 15008690 intergenic not near genes chr2R 15008758 intergenic not near genes chr2R_6_15005001 chr2R_15005001 RAL-304_75b 300 chr2R 15084982 15085012 chr2R 15092031 15092060 297 4 7048 1.5 0.0 0.8 2.2 7078 chr2R 15084982 intergenic not near genes chr2R 15088521 intergenic not near genes chr2R 15092060 5` UTR CR44457 + chr2R_4_15085001 chr2R_15085001 RAL-304_75b 301 chr2R 15168274 15168284 chr2R 15168367 15168377 4 93 5.5 0.0 2.8 1.1 103 chr2R 15168274 intron igl + chr2R 15168326 intron igl + chr2R 15168377 intron igl + chr2R_4_15165001 chr2R_15165001 RAL-304_75b 302 chr2R 15285561 15285582 chr2R 15285637 15285658 5 76 2.0 2.0 2.0 1.7 97 chr2R 15285561 intron Trpm - chr2R 15285610 intron Trpm - chr2R 15285658 intron Trpm - chr2R_5_15285001 chr2R_15285001 RAL-304_75b 303 chr2R 15537718 15537740 chr2R 15537800 15537822 5 82 0.0 1.0 0.5 3.3 104 chr2R 15537718 3` UTR CG30471 + chr2R 15537770 3` UTR CG30471 + chr2R 15537822 intergenic CG30471 +,CG30467 + chr2R_5_15535001 chr2R_15535001 RAL-304_75b 304 chr2R 15655982 15656005 chr2R 15656062 15656085 5 80 0.0 0.0 0.0 5.0 103 chr2R 15655982 intron CG42524 + chr2R 15656034 intron CG42524 + chr2R 15656085 intron CG42524 + chr2R_5_15655001 chr2R_15655001 RAL-304_75b 305 chr2R 15675111 15675139 chr2R 15675188 15675215 14 77 2.5 0.0 1.2 6.4 104 chr2R 15675111 intron fus - chr2R 15675163 intron fus - chr2R 15675215 intron fus - chr2R_14_15675001 chr2R_15675001 RAL-304_75b 306 chr2R 15700038 15700042 chr2R 15700128 15700128 5 89 2.0 0.5 1.2 2.3 90 chr2R 15700038 intron,5` UTR CG30080 -,CG42662 - chr2R 15700083 intron,5` UTR CG30080 -,CG42662 - chr2R 15700128 intron,5` UTR CG30080 -,CG42662 - chr2R_5_15700001 chr2R_15700001 RAL-304_75b 307 chr2R 15795460 15795473 chr2R 15795562 15795574 4 101 5.0 0.0 2.5 1.1 114 chr2R 15795460 intron,intron Zasp52 -,tun + chr2R 15795517 intron,intron Zasp52 -,tun + chr2R 15795574 intron,intron Zasp52 -,tun + chr2R_4_15795001 chr2R_15795001 RAL-304_75b 308 chr2R 15873856 15873887 chr2R 15873949 15873981 10 94 0.5 0.0 0.2 8.3 125 chr2R 15873856 intron sli - chr2R 15873918 intron sli - chr2R 15873981 intron sli - chr2R_10_15870001 chr2R_15870001 RAL-304_75b 309 chr2R 15999019 15999042 chr2R 15999099 15999122 5 80 0.0 0.0 0.0 5.0 103 chr2R 15999019 intron ATPCL - chr2R 15999070 intron ATPCL - chr2R 15999122 intron ATPCL - chr2R_5_15995001 chr2R_15995001 RAL-304_75b 310 chr2R 16799040 16799054 chr2R 16799119 16799134 7 80 2.5 1.0 1.8 2.5 94 chr2R 16799040 intergenic not near genes chr2R 16799087 intergenic not near genes chr2R 16799134 intergenic not near genes chr2R_7_16795001 chr2R_16795001 RAL-304_75b 311 chr2R 17221909 17221924 chr2R 17222101 17222114 10 191 0.0 0.0 0.0 10.0 205 chr2R 17221909 intron mbl + chr2R 17222012 intron mbl + chr2R 17222114 intron mbl + chr2R_10_17220001 chr2R_17220001 RAL-304_75b 312 chr2R 17232813 17232813 chr2R 17232899 17232900 4 87 0.5 5.0 2.8 1.1 87 chr2R 17232813 intron mbl + chr2R 17232856 intron mbl + chr2R 17232900 intron mbl + chr2R_4_17230001 chr2R_17230001 RAL-304_75b 313 chr2R 17395282 17395317 chr2R 17395360 17395395 6 78 1.0 0.5 0.8 3.3 113 chr2R 17395282 intron Sip1 + chr2R 17395338 intron Sip1 + chr2R 17395395 intron Sip1 + chr2R_6_17395001 chr2R_17395001 RAL-304_75b 314 chr2R 17782362 17782388 chr2R 17783565 17783590 pogo 7 1203 1.0 0.0 0.5 4.7 1228 chr2R 17782362 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783590 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-304_75b 315 chr2R 17908014 17908050 chr2R 17908090 17908126 4 76 0.5 0.0 0.2 3.3 112 chr2R 17908014 intron Elk + chr2R 17908070 intron Elk + chr2R 17908126 intron Elk + chr2R_4_17905001 chr2R_17905001 RAL-304_75b 316 chr2R 17929143 17929150 chr2R 17929236 17929242 7 92 0.5 0.5 0.5 4.7 99 chr2R 17929143 intergenic not near genes chr2R 17929192 intergenic not near genes chr2R 17929242 intergenic not near genes chr2R_7_17925001 chr2R_17925001 RAL-304_75b 317 chr2R 17997170 17997186 chr2R 17997250 17997268 11 82 1.5 5.0 3.2 2.6 98 chr2R 17997170 intron dpr13 - chr2R 17997219 intron dpr13 - chr2R 17997268 intron dpr13 - chr2R_11_17995001 chr2R_17995001 RAL-304_75b 318 chr2R 18041552 18041567 chr2R 18041635 18041651 8 84 0.0 2.5 1.2 3.6 99 chr2R 18041552 intergenic not near genes chr2R 18041602 intergenic not near genes chr2R 18041651 intergenic not near genes chr2R_8_18040001 chr2R_18040001 RAL-304_75b 319 chr2R 18045291 18045324 chr2R 18045379 18045412 5 87 3.0 0.5 1.8 1.8 121 chr2R 18045291 intergenic CG5770 - chr2R 18045352 intergenic CG5770 - chr2R 18045412 intergenic CG5770 - chr2R_5_18045001 chr2R_18045001 RAL-304_75b 320 chr2R 18322314 18322343 chr2R 18322394 18322423 4 80 0.0 1.0 0.5 2.7 109 chr2R 18322314 intron sbb - chr2R 18322368 intron sbb - chr2R 18322423 intron sbb - chr2R_4_18320001 chr2R_18320001 RAL-304_75b 321 chr2R 18358387 18358423 chr2R 18372599 18372633 roo 8 14211 0.0 1.0 0.5 5.3 14246 chr2R 18358387 intergenic not near genes chr2R 18365510 intergenic not near genes chr2R 18372633 intergenic not near genes chr2R_8_18365001 chr2R_18365001 RAL-304_75b 322 chr2R 18396103 18396122 chr2R 18396185 18396204 6 82 1.5 0.0 0.8 3.3 101 chr2R 18396103 intergenic not near genes chr2R 18396154 intergenic GstE10 - chr2R 18396204 intergenic GstE10 - chr2R_6_18395001 chr2R_18395001 RAL-304_75b 323 chr2R 18402500 18402522 chr2R 18402588 18402609 6 88 3.0 9.5 6.2 0.8 109 chr2R 18402500 intergenic not near genes chr2R 18402554 intergenic not near genes chr2R 18402609 intergenic not near genes chr2R_6_18400001 chr2R_18400001 RAL-304_75b 324 chr2R 18435841 18435863 chr2R 18435918 18435940 7 76 0.0 0.0 0.0 7.0 99 chr2R 18435841 intron CG30118 - chr2R 18435890 intron CG30118 - chr2R 18435940 intron CG30118 - chr2R_7_18435001 chr2R_18435001 RAL-304_75b 325 chr2R 18483027 18483057 chr2R 18483265 18483295 4 238 2.0 2.5 2.2 1.2 268 chr2R 18483027 intron CG30116 - chr2R 18483161 intron CG30116 - chr2R 18483295 intron CG30116 - chr2R_4_18480001 chr2R_18480001 RAL-304_75b 326 chr2R 18526594 18526622 chr2R 18526676 18526704 14 82 1.5 3.5 2.5 4.0 110 chr2R 18526594 intergenic CG43066 + chr2R 18526649 intergenic CG43066 + chr2R 18526704 intergenic CG43066 + chr2R_14_18525001 chr2R_18525001 RAL-304_75b 327 chr2R 18590891 18590897 chr2R 18600042 18600049 roo 5 9152 4.5 6.0 5.2 0.8 9158 chr2R 18590891 intron GEFmeso - chr2R 18595470 intron GEFmeso - chr2R 18600049 intron GEFmeso - chr2R_5_18595001 chr2R_18595001 RAL-304_75b 328 chr2R 18871660 18871676 chr2R 18871743 18871761 5 85 2.5 0.0 1.2 2.3 101 chr2R 18871660 intergenic not near genes chr2R 18871710 intergenic not near genes chr2R 18871761 intergenic not near genes chr2R_5_18870001 chr2R_18870001 RAL-304_75b 329 chr2R 18877414 18877418 chr2R 18877600 18877604 6 186 2.5 2.5 2.5 1.7 190 chr2R 18877414 intergenic not near genes chr2R 18877509 intergenic not near genes chr2R 18877604 intergenic not near genes chr2R_6_18875001 chr2R_18875001 RAL-304_75b 330 chr2R 18888206 18888224 chr2R 18888392 18888408 8 186 0.5 0.0 0.2 6.7 202 chr2R 18888206 intron sano + chr2R 18888307 intron sano + chr2R 18888408 intron sano + chr2R_8_18885001 chr2R_18885001 RAL-304_75b 331 chr2R 18924280 18924301 chr2R 18924359 18924380 5 80 1.0 0.0 0.5 3.3 100 chr2R 18924280 intron sano + chr2R 18924330 intron sano + chr2R 18924380 intron sano + chr2R_5_18920001 chr2R_18920001 RAL-304_75b 332 chr2R 18989018 18989046 chr2R 18989096 18989124 6 78 2.0 0.0 1.0 3.0 106 chr2R 18989018 intron tn + chr2R 18989071 intron tn + chr2R 18989124 intron tn + chr2R_6_18985001 chr2R_18985001 RAL-304_75b 333 chr2R 19183345 19183361 chr2R 19183421 19183437 4 76 3.0 0.0 1.5 1.6 92 chr2R 19183345 intron hppy + chr2R 19183391 intron hppy + chr2R 19183437 intron hppy + chr2R_4_19180001 chr2R_19180001 RAL-304_75b 334 chr2R 19183645 19183647 chr2R 19183727 19183731 6 84 2.5 1.5 2.0 2.0 86 chr2R 19183645 intron hppy + chr2R 19183688 intron hppy + chr2R 19183731 intron hppy + chr2R_6_19180001 chr2R_19180001 RAL-304_75b 335 chr2R 19209204 19209207 chr2R 19209433 19209434 4 228 1.5 1.0 1.2 1.8 230 chr2R 19209204 intron hppy + chr2R 19209319 intron hppy + chr2R 19209434 intron hppy + chr2R_4_19205001 chr2R_19205001 RAL-304_75b 336 chr2R 19284439 19284473 chr2R 19284520 19284554 7 81 0.5 0.0 0.2 5.8 115 chr2R 19284439 intergenic CG10476 -,CG11906 - chr2R 19284496 intergenic CG10476 - chr2R 19284554 exon CG10476 - chr2R_7_19280001 chr2R_19280001 RAL-304_75b 337 chr2R 19359064 19359065 chr2R 19359146 19359148 4 83 1.0 4.0 2.5 1.1 84 chr2R 19359064 intron CG11961 + chr2R 19359106 intron CG11961 + chr2R 19359148 intron CG11961 + chr2R_4_19355001 chr2R_19355001 RAL-304_75b 338 chr2R 19504364 19504379 chr2R 19504449 19504464 4 85 0.5 0.5 0.5 2.7 100 chr2R 19504364 3` UTR CG11007 + chr2R 19504414 3` UTR CG11007 + chr2R 19504464 3` UTR CG11007 + chr2R_4_19500001 chr2R_19500001 RAL-304_75b 339 chr2R 19551173 19551197 chr2R 19551250 19551274 4 77 1.0 3.0 2.0 1.3 101 chr2R 19551173 intron sm - chr2R 19551224 intron sm - chr2R 19551274 intron sm - chr2R_4_19550001 chr2R_19550001 RAL-304_75b 340 chr2R 19570140 19570168 chr2R 19570224 19570256 8 87 2.0 3.0 2.5 2.3 116 chr2R 19570140 intron sm - chr2R 19570198 intron sm - chr2R 19570256 intron sm - chr2R_8_19570001 chr2R_19570001 RAL-304_75b 341 chr2R 19603974 19603994 chr2R 19604058 19604078 6 83 0.0 2.0 1.0 3.0 104 chr2R 19603974 intron sm - chr2R 19604026 intron sm - chr2R 19604078 intron sm - chr2R_6_19600001 chr2R_19600001 RAL-304_75b 342 chr2R 19698588 19698612 chr2R 19698674 19698697 4 85 0.0 0.0 0.0 4.0 109 chr2R 19698588 intergenic Obp56a +,Obp56b - chr2R 19698642 intergenic Obp56b -,Obp56a + chr2R 19698697 intergenic Obp56b -,Obp56a + chr2R_4_19695001 chr2R_19695001 RAL-304_75b 343 chr2R 19847137 19847222 chr2R 19847215 19847319 7 83 0.0 0.0 0.0 7.0 182 chr2R 19847137 intergenic not near genes chr2R 19847228 intergenic not near genes chr2R 19847319 intergenic not near genes chr2R_7_19845001 chr2R_19845001 RAL-304_75b 344 chr2R 19957438 19957447 chr2R 19962639 19962647 copia 5 5201 0.5 2.5 1.5 2.0 5209 chr2R 19957438 intergenic CG44623 + chr2R 19960042 intergenic not near genes chr2R 19962647 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-304_75b 345 chr2R 20280815 20280834 chr2R 20281057 20281076 11 243 11.0 18.0 14.5 0.7 261 chr2R 20280815 intron CG9090 - chr2R 20280946 intron CG9090 - chr2R 20281076 5` UTR CG9090 - chr2R_11_20280001 chr2R_20280001 RAL-304_75b 346 chr2R 20321251 20321261 chr2R 20321340 20321352 6 90 0.0 0.5 0.2 5.0 101 chr2R 20321251 intron CG8920 + chr2R 20321302 intron CG8920 + chr2R 20321352 intron CG8920 + chr2R_6_20320001 chr2R_20320001 RAL-304_75b 347 chr2R 20401243 20401269 chr2R 20401323 20401350 17 80 2.0 2.5 2.2 5.3 107 chr2R 20401243 intergenic not near genes chr2R 20401296 intergenic not near genes chr2R 20401350 intergenic not near genes chr2R_17_20400001 chr2R_20400001 RAL-304_75b 348 chr2R 20454803 20454830 chr2R 20454884 20454911 4 81 1.5 1.5 1.5 1.6 108 chr2R 20454803 intron CG12484 + chr2R 20454857 intron CG12484 + chr2R 20454911 intron CG12484 + chr2R_4_20450001 chr2R_20450001 RAL-304_75b 349 chr2R 10366130 10366130 chr2R 20602730 20602730 5 10236600 5.5 3.5 4.5 0.9 10236600 chr2R 10366130 intron CG42732 - chr2R 15484430 intergenic not near genes chr2R 20602730 intron bl + chr2R_5_15480001 chr2R_15480001 RAL-304_75b 350 chr2R 20671212 20671215 chr2R 20671302 20671302 4 89 5.5 0.0 2.8 1.1 90 chr2R 20671212 5` UTR CG30152 + chr2R 20671257 5` UTR CG30152 + chr2R 20671302 5` UTR CG30152 + chr2R_4_20670001 chr2R_20670001 RAL-304_75b 351 chr2R 20783323 20783332 chr2R 20788095 20788104 F-element 4 4772 3.5 2.0 2.8 1.1 4781 chr2R 20783323 intergenic not near genes chr2R 20785714 intergenic not near genes chr2R 20788104 intergenic CG43666 - chr2R_4_20785001 chr2R_20785001 RAL-304_75b 352 chr2R 20895567 20895595 chr2R 20895650 20895675 4 82 0.5 1.5 1.0 2.0 108 chr2R 20895567 intron otp - chr2R 20895621 intron otp - chr2R 20895675 intron otp - chr2R_4_20895001 chr2R_20895001 RAL-304_75b 353 chr2R 20910849 20910867 chr2R 20910934 20910951 8 85 2.0 0.0 1.0 4.0 102 chr2R 20910849 intergenic CG9235 + chr2R 20910900 intergenic CG9235 + chr2R 20910951 intergenic CG9235 + chr2R_8_20910001 chr2R_20910001 RAL-304_75b 354 chr2R 21040875 21040883 chr2R 21040951 21040959 5 75 0.0 3.5 1.8 1.8 84 chr2R 21040875 intergenic not near genes chr2R 21040917 intergenic not near genes chr2R 21040959 intergenic not near genes chr2R_5_21040001 chr2R_21040001 RAL-304_75b 355 chr2R 21151143 21151145 chr2R 21153802 21153805 opus 4 2660 0.0 0.0 0.0 4.0 2662 chr2R 21151143 intron CG30389 - chr2R 21152474 intron CG30389 - chr2R 21153805 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-304_75b 356 chr2R 21370522 21370542 chr2R 21370629 21370645 6 106 2.0 0.0 1.0 3.0 123 chr2R 21370522 intron cv-2 - chr2R 21370584 intron cv-2 - chr2R 21370645 intron cv-2 - chr2R_6_21370001 chr2R_21370001 RAL-304_75b 357 chr2R 21508070 21508089 chr2R 21508151 21508170 5 81 1.0 1.5 1.2 2.3 100 chr2R 21508070 intron MESK2 + chr2R 21508120 intron MESK2 + chr2R 21508170 intron MESK2 + chr2R_5_21505001 chr2R_21505001 RAL-304_75b 358 chr2R 21725198 21725219 chr2R 21725274 21725295 5 76 0.0 0.0 0.0 5.0 97 chr2R 21725198 intergenic not near genes chr2R 21725246 intergenic not near genes chr2R 21725295 intergenic not near genes chr2R_5_21725001 chr2R_21725001 RAL-304_75b 359 chr2R 21738275 21738310 chr2R 21747435 21747470 roo 5 9160 1.5 1.5 1.5 2.0 9195 chr2R 21738275 intergenic not near genes chr2R 21742872 intergenic not near genes chr2R 21747470 intergenic not near genes chr2R_5_21740001 chr2R_21740001 RAL-304_75b 360 chr2R 21809535 21809535 chr2R 21817775 21817775 roo 4 8240 4.0 1.0 2.5 1.1 8240 chr2R 21809535 intergenic not near genes chr2R 21813655 intergenic not near genes chr2R 21817775 intergenic not near genes chr2R_4_21810001 chr2R_21810001 RAL-304_75b 361 chr2R 21906292 21906295 chr2R 21906393 21906395 4 100 0.5 1.0 0.8 2.2 103 chr2R 21906292 intron Fili + chr2R 21906344 intron Fili + chr2R 21906395 intron Fili + chr2R_4_21905001 chr2R_21905001 RAL-304_75b 362 chr2R 21932250 21932269 chr2R 21932328 21932347 4 78 1.5 0.5 1.0 2.0 97 chr2R 21932250 intron Fili + chr2R 21932298 intron Fili + chr2R 21932347 intron Fili + chr2R_4_21930001 chr2R_21930001 RAL-304_75b 363 chr2R 21993376 21993398 chr2R 21993467 21993486 6 90 0.0 0.0 0.0 6.0 110 chr2R 21993376 intron CG34370 - chr2R 21993431 intron CG34370 - chr2R 21993486 intron CG34370 - chr2R_6_21990001 chr2R_21990001 RAL-304_75b 364 chr2R 22095978 22095992 chr2R 22096061 22096075 4 82 2.5 1.0 1.8 1.4 97 chr2R 22095978 intron CG11073 - chr2R 22096026 intron CG11073 - chr2R 22096075 intron CG11073 - chr2R_4_22095001 chr2R_22095001 RAL-304_75b 365 chr2R 22185690 22185697 chr2R 22185789 22185796 5 99 3.0 0.0 1.5 2.0 106 chr2R 22185690 3` UTR MED16 + chr2R 22185743 3` UTR MED16 + chr2R 22185796 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-304_75b 366 chr2R 22189449 22189464 chr2R 22189575 22189588 8 126 1.0 1.0 1.0 4.0 139 chr2R 22189449 3` UTR Vps35 + chr2R 22189518 3` UTR Vps35 + chr2R 22189588 3` UTR Vps35 + chr2R_8_22185001 chr2R_22185001 RAL-304_75b 367 chr2R 22349698 22349725 chr2R 22351479 22351509 jockey 6 1783 1.0 2.0 1.5 2.4 1811 chr2R 22349698 intron Liprin-gamma - chr2R 22350604 intron Liprin-gamma - chr2R 22351509 intron Liprin-gamma - chr2R_6_22350001 chr2R_22350001 RAL-304_75b 368 chr2R 22574172 22574178 chr2R 22574252 22574258 4 79 1.0 4.0 2.5 1.1 86 chr2R 22574172 intron dnr1 - chr2R 22574215 intron dnr1 - chr2R 22574258 intron dnr1 - chr2R_4_22570001 chr2R_22570001 RAL-304_75b 369 chr2R 22774966 22775000 chr2R 22775384 22775418 jockey 18 418 1.0 1.0 1.0 9.0 452 chr2R 22774966 intron CG42260 - chr2R 22775192 intron CG42260 - chr2R 22775418 intron CG42260 - chr2R_18_22775001 chr2R_22775001 RAL-304_75b 370 chr2R 23052656 23052685 chr2R 23052730 23052760 8 76 1.0 3.0 2.0 2.7 104 chr2R 23052656 intergenic not near genes chr2R 23052708 intergenic not near genes chr2R 23052760 intergenic not near genes chr2R_8_23050001 chr2R_23050001 RAL-304_75b 371 chr2R 23155734 23155753 chr2R 23155860 23155877 7 126 0.0 3.5 1.8 2.5 143 chr2R 23155734 intron CG9899 + chr2R 23155806 intron CG9899 + chr2R 23155877 intron CG9899 + chr2R_7_23155001 chr2R_23155001 RAL-304_75b 372 chr2R 23175037 23175063 chr2R 23175114 23175139 4 77 0.0 4.0 2.0 1.3 102 chr2R 23175037 intron CG34371 - chr2R 23175088 intron CG34371 - chr2R 23175139 intron CG34371 - chr2R_4_23175001 chr2R_23175001 RAL-304_75b 373 chr2R 23229717 23229734 chr2R 23229928 23229945 4 211 1.0 0.0 0.5 2.7 228 chr2R 23229717 intergenic not near genes chr2R 23229831 intergenic not near genes chr2R 23229945 intergenic not near genes chr2R_4_23225001 chr2R_23225001 RAL-304_75b 374 chr2R 23294220 23294226 chr2R 23294296 23294302 4 76 0.0 2.5 1.2 1.8 82 chr2R 23294220 intergenic not near genes chr2R 23294261 intergenic not near genes chr2R 23294302 intergenic not near genes chr2R_4_23290001 chr2R_23290001 RAL-304_75b 375 chr2R 23356276 23356302 chr2R 23356365 23356391 8 89 0.5 3.0 1.8 2.9 115 chr2R 23356276 3` UTR Rpi + chr2R 23356334 3` UTR Rpi + chr2R 23356391 3` UTR,3` UTR Rpi +,CG3500 - chr2R_8_23355001 chr2R_23355001 RAL-304_75b 376 chr2R 23413871 23413883 chr2R 23414028 23414038 7 156 5.5 1.5 3.5 1.6 167 chr2R 23413871 intron CG9812 - chr2R 23413954 intron CG9812 - chr2R 23414038 intron CG9812 - chr2R_7_23410001 chr2R_23410001 RAL-304_75b 377 chr2R 23452657 23452675 chr2R 23453656 23453674 5 999 2.0 3.0 2.5 1.4 1017 chr2R 23452657 intron CG43795 + chr2R 23453166 intron CG43795 + chr2R 23453674 intron CG43795 + chr2R_5_23450001 chr2R_23450001 RAL-304_75b 378 chr2R 23493013 23493040 chr2R 23493095 23493121 4 81 0.5 0.0 0.2 3.3 108 chr2R 23493013 intergenic not near genes chr2R 23493067 intergenic not near genes chr2R 23493121 intergenic not near genes chr2R_4_23490001 chr2R_23490001 RAL-304_75b 379 chr2R 23499322 23499337 chr2R 23499422 23499437 4 100 1.5 1.5 1.5 1.6 115 chr2R 23499322 intergenic CG13558 + chr2R 23499380 intergenic CG13558 + chr2R 23499437 intergenic CG13558 + chr2R_4_23495001 chr2R_23495001 RAL-304_75b 380 chr2R 8200982 8200982 chr2R 23499412 23499413 4 15298430 6.5 0.0 3.2 1.0 15298431 chr2R 8200982 intron LRP1 + chr2R 15850198 intron tun + chr2R 23499413 intergenic CG13558 + chr2R_4_15850001 chr2R_15850001 RAL-304_75b 381 chr2R 23508920 23508940 chr2R 23509037 23509057 6 117 1.5 2.5 2.0 2.0 137 chr2R 23508920 intergenic not near genes chr2R 23508988 intergenic not near genes chr2R 23509057 intergenic not near genes chr2R_6_23505001 chr2R_23505001 RAL-304_75b 382 chr2R 23522414 23522443 chr2R 23522493 23522522 5 79 2.0 0.5 1.2 2.3 108 chr2R 23522414 intron RabX1 - chr2R 23522468 intron RabX1 - chr2R 23522522 intron RabX1 - chr2R_5_23520001 chr2R_23520001 RAL-304_75b 383 chr2R 19999734 19999734 chr2R 23721228 23721228 4 3721494 8.0 3.5 5.8 0.6 3721494 chr2R 19999734 intergenic not near genes chr2R 21860481 intergenic CG9294 + chr2R 23721228 intron Sesn + chr2R_4_21860001 chr2R_21860001 RAL-304_75b 384 chr2R 23819937 23819942 chr2R 23820021 23820029 10 88 4.5 3.0 3.8 2.1 92 chr2R 23819937 intergenic CG5549 + chr2R 23819983 intergenic CG5549 + chr2R 23820029 intergenic CG5549 + chr2R_10_23815001 chr2R_23815001 RAL-304_75b 385 chr2R 23914312 23914322 chr2R 23921936 23921943 412 5 7623 0.0 0.5 0.2 4.2 7631 chr2R 23914312 exon kcc + chr2R 23918128 intron kcc + chr2R 23921943 intron kcc + chr2R_5_23915001 chr2R_23915001 RAL-304_75b 386 chr2R 23986519 23986544 chr2R 23986599 23986623 4 79 0.0 4.0 2.0 1.3 104 chr2R 23986519 intron Phm - chr2R 23986571 intron Phm - chr2R 23986623 intron,5` UTR Phm -,CG30178 + chr2R_4_23985001 chr2R_23985001 RAL-304_75b 387 chr2R 24031385 24031402 chr2R 24031469 24031486 5 84 4.0 0.5 2.2 1.6 101 chr2R 24031385 5` UTR CG30172 - chr2R 24031436 intergenic CG30172 -,Chi - chr2R 24031486 intergenic Chi -,CG30172 - chr2R_5_24030001 chr2R_24030001 RAL-304_75b 388 chr2R 24141158 24141158 chr2R 24141236 24141236 4 78 0.5 7.0 3.8 0.8 78 chr2R 24141158 intron Dat + chr2R 24141197 intron Dat + chr2R 24141236 intron Dat + chr2R_4_24140001 chr2R_24140001 RAL-304_75b 389 chr2R 24177234 24177264 chr2R 24184719 24184749 412 7 7485 0.0 4.5 2.2 2.2 7515 chr2R 24177234 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184749 3` UTR Nop60B + chr2R_7_24180001 chr2R_24180001 RAL-304_75b 390 chr2R 24287139 24287154 chr2R 24287215 24287231 5 76 2.0 0.0 1.0 2.5 92 chr2R 24287139 intron nvy + chr2R 24287185 intron nvy + chr2R 24287231 intron nvy + chr2R_5_24285001 chr2R_24285001 RAL-304_75b 391 chr2R 24351413 24351436 chr2R 24351494 24351517 6 80 2.0 1.5 1.8 2.1 104 chr2R 24351413 intron bs + chr2R 24351465 intron bs + chr2R 24351517 intron,3` UTR bs +,CR44811 - chr2R_6_24350001 chr2R_24350001 RAL-304_75b 392 chr2R 24590097 24590107 chr2R 24590205 24590215 4 108 4.0 5.5 4.8 0.7 118 chr2R 24590097 intron pio + chr2R 24590156 intron pio + chr2R 24590215 intron pio + chr2R_4_24590001 chr2R_24590001 RAL-304_75b 393 chr2R 24763612 24763634 chr2R 24765588 24765610 G2 8 1976 4.0 3.0 3.5 1.8 1998 chr2R 24763612 exon CG3894 + chr2R 24764611 intron CG3894 + chr2R 24765610 exon CG3894 + chr2R_8_24760001 chr2R_24760001 RAL-304_75b 394 chr2R 25004914 25004918 chr2R 25004992 25004996 8 77 0.5 3.0 1.8 2.9 82 chr2R 25004914 intron zip - chr2R 25004955 intron zip - chr2R 25004996 intron zip - chr2R_8_25000001 chr2R_25000001 RAL-304_75b 395 chr2R 25014542 25014544 chr2R 25014618 25014618 7 76 0.0 3.5 1.8 2.5 76 chr2R 25014542 intron uzip + chr2R 25014580 intron uzip + chr2R 25014618 intron uzip + chr2R_7_25010001 chr2R_25010001 RAL-304_75b 396 chr2R 25080306 25080337 chr2R 25080675 25080707 4 370 0.0 0.0 0.0 4.0 401 chr2R 25080306 intron gol - chr2R 25080506 intron gol - chr2R 25080707 intron gol - chr2R_4_25080001 chr2R_25080001 RAL-304_75b 397 chr2R 25122964 25122981 chr2R 25123042 25123060 7 79 2.5 1.0 1.8 2.5 96 chr2R 25122964 intron lov - chr2R 25123012 intron lov - chr2R 25123060 intron lov - chr2R_7_25120001 chr2R_25120001 RAL-304_75b 398 chr2R 25253465 25253475 chr2R 25253541 25253550 5 76 1.0 2.5 1.8 1.8 85 chr2R 25253465 intron,intron CG9380 -,CG30428 + chr2R 25253508 intron,intron CG9380 -,CG30428 + chr2R 25253550 intron,intron CG9380 -,CG30428 + chr2R_5_25250001 chr2R_25250001 RAL-304_75b 399 chr3L 51396 51396 chr3L 51491 51494 4 97 3.5 7.5 5.5 0.6 98 chr3L 51396 intergenic not near genes chr3L 51445 intergenic not near genes chr3L 51494 intergenic not near genes chr3L_4_50001 chr3L_50001 RAL-304_75b 400 chr3L 90238 90260 chr3L 90323 90345 4 84 0.0 1.5 0.8 2.2 107 chr3L 90238 intergenic not near genes chr3L 90292 intergenic not near genes chr3L 90345 intergenic not near genes chr3L_4_90001 chr3L_90001 RAL-304_75b 401 chr3L 110209 110243 chr3L 119376 119409 roo 11 9167 2.5 2.0 2.2 3.4 9200 chr3L 110209 intergenic not near genes chr3L 114809 intergenic not near genes chr3L 119409 intergenic not near genes chr3L_11_110001 chr3L_110001 RAL-304_75b 402 chr3L 402703 402713 chr3L 409756 409766 297 5 7052 4.5 5.0 4.8 0.9 7063 chr3L 402703 intergenic not near genes chr3L 406234 intergenic not near genes chr3L 409766 intergenic not near genes chr3L_5_405001 chr3L_405001 RAL-304_75b 403 chr3L 421052 421080 chr3L 421147 421172 14 95 3.5 1.0 2.2 4.4 120 chr3L 421052 intergenic not near genes chr3L 421112 intergenic not near genes chr3L 421172 intergenic not near genes chr3L_14_420001 chr3L_420001 RAL-304_75b 404 chr3L 827535 827557 chr3L 827611 827633 11 76 3.5 1.0 2.2 3.4 98 chr3L 827535 intron,intron CG13900 -,CR45184 - chr3L 827584 intron,intron,3` UTR CG13900 -,CR45184 -,snoRNA:Me28S-G3113b - chr3L 827633 intron,intron CG13900 -,CR45184 - chr3L_11_825001 chr3L_825001 RAL-304_75b 405 chr3L 939781 939789 chr3L 940899 940910 jockey 8 1120 2.5 0.5 1.5 3.2 1129 chr3L 939781 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940910 intron Glut1 + chr3L_8_940001 chr3L_940001 RAL-304_75b 406 chr3L 961020 961043 chr3L 961113 961136 8 93 3.5 0.0 1.8 2.9 116 chr3L 961020 intron Glut1 + chr3L 961078 intron Glut1 + chr3L 961136 intron Glut1 + chr3L_8_960001 chr3L_960001 RAL-304_75b 407 chr3L 1015027 1015055 chr3L 1015139 1015163 6 111 0.0 3.5 1.8 2.1 136 chr3L 1015027 intron trio - chr3L 1015095 intron trio - chr3L 1015163 intron trio - chr3L_6_1015001 chr3L_1015001 RAL-304_75b 408 chr3L 1031576 1031584 chr3L 1031652 1031659 5 75 0.5 0.0 0.2 4.2 83 chr3L 1031576 intron trio - chr3L 1031618 intron trio - chr3L 1031659 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-304_75b 409 chr3L 1103994 1104014 chr3L 1104185 1104205 4 191 0.5 1.0 0.8 2.2 211 chr3L 1103994 intergenic not near genes chr3L 1104100 intergenic not near genes chr3L 1104205 intergenic not near genes chr3L_4_1100001 chr3L_1100001 RAL-304_75b 410 chr3L 1219595 1219605 chr3L 1227328 1227338 412 6 7733 3.0 1.5 2.2 1.9 7743 chr3L 1219595 intron mwh + chr3L 1223466 intron mwh + chr3L 1227338 intron mwh + chr3L_6_1220001 chr3L_1220001 RAL-304_75b 411 chr3L 1290033 1290050 chr3L 1290139 1290156 10 105 0.5 0.5 0.5 6.7 123 chr3L 1290033 intron CG32333 + chr3L 1290094 intron CG32333 + chr3L 1290156 intron CG32333 + chr3L_10_1290001 chr3L_1290001 RAL-304_75b 412 chr3L 2035108 2035108 chr3L 2035297 2035298 4 190 0.0 0.0 0.0 4.0 190 chr3L 2035108 intergenic not near genes chr3L 2035203 intergenic not near genes chr3L 2035298 intergenic not near genes chr3L_4_2035001 chr3L_2035001 RAL-304_75b 413 chr3L 2534623 2534635 chr3L 2534705 2534718 7 83 0.0 2.0 1.0 3.5 95 chr3L 2534623 intron Spn - chr3L 2534670 intron Spn - chr3L 2534718 exon Spn - chr3L_7_2530001 chr3L_2530001 RAL-304_75b 414 chr3L 2579339 2579352 chr3L 2579430 2579442 9 91 1.0 2.0 1.5 3.6 103 chr3L 2579339 intron msn - chr3L 2579390 intron msn - chr3L 2579442 intron msn - chr3L_9_2575001 chr3L_2575001 RAL-304_75b 415 chr3L 2626419 2626436 chr3L 2626543 2626560 4 124 0.5 1.5 1.0 2.0 141 chr3L 2626419 intron Pxn - chr3L 2626490 intron Pxn - chr3L 2626560 intron Pxn - chr3L_4_2625001 chr3L_2625001 RAL-304_75b 416 chr3L 2683956 2683974 chr3L 2684032 2684050 5 76 0.0 1.0 0.5 3.3 94 chr3L 2683956 intron Fife - chr3L 2684003 intron Fife - chr3L 2684050 intron Fife - chr3L_5_2680001 chr3L_2680001 RAL-304_75b 417 chr3L 2719542 2719551 chr3L 2719644 2719653 4 102 1.0 0.0 0.5 2.7 111 chr3L 2719542 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719653 3` UTR Mrtf - chr3L_4_2715001 chr3L_2715001 RAL-304_75b 418 chr3L 3259816 3259828 chr3L 3259916 3259928 4 100 0.0 0.0 0.0 4.0 112 chr3L 3259816 intron ckd + chr3L 3259872 intron ckd + chr3L 3259928 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-304_75b 419 chr3L 3314154 3314170 chr3L 3314288 3314303 5 133 5.5 3.0 4.2 1.0 149 chr3L 3314154 intergenic ZnT63C +,Drsl2 + chr3L 3314228 intergenic Drsl2 +,ZnT63C + chr3L 3314303 intergenic Drsl2 +,ZnT63C + chr3L_5_3310001 chr3L_3310001 RAL-304_75b 420 chr3L 3312265 3312278 chr3L 3315548 3315559 7 3282 11.0 15.0 13.0 0.5 3294 chr3L 3312265 exon ZnT63C + chr3L 3313912 3` UTR ZnT63C + chr3L 3315559 intergenic Drsl4 +,Drsl3 + chr3L_7_3310001 chr3L_3310001 RAL-304_75b 421 chr3L 3315977 3315987 chr3L 3316078 3316086 6 101 1.0 0.0 0.5 4.0 109 chr3L 3315977 intergenic Drsl4 + chr3L 3316032 intergenic Drsl4 + chr3L 3316086 intergenic Drsl4 + chr3L_6_3315001 chr3L_3315001 RAL-304_75b 422 chr3L 3598209 3598239 chr3L 3598293 3598323 7 83 0.0 1.5 0.8 3.9 114 chr3L 3598209 exon Eip63E + chr3L 3598266 intron Eip63E + chr3L 3598323 intron Eip63E + chr3L_7_3595001 chr3L_3595001 RAL-304_75b 423 chr3L 3619414 3619416 chr3L 3619508 3619510 4 94 3.5 0.0 1.8 1.4 96 chr3L 3619414 intergenic not near genes chr3L 3619462 intergenic not near genes chr3L 3619510 intergenic not near genes chr3L_4_3615001 chr3L_3615001 RAL-304_75b 424 chr3L 3627247 3627261 chr3L 3627351 3627366 4 105 0.0 2.0 1.0 2.0 119 chr3L 3627247 intron dar1 + chr3L 3627306 intron dar1 + chr3L 3627366 intron dar1 + chr3L_4_3625001 chr3L_3625001 RAL-304_75b 425 chr3L 4082679 4082689 chr3L 4082758 4082768 7 79 1.5 0.5 1.0 3.5 89 chr3L 4082679 intron Gad1 - chr3L 4082724 intron Gad1 - chr3L 4082768 intron Gad1 - chr3L_7_4080001 chr3L_4080001 RAL-304_75b 426 chr3L 4146813 4146835 chr3L 4146895 4146917 11 82 0.0 0.0 0.0 11.0 104 chr3L 4146813 intergenic not near genes chr3L 4146865 intergenic not near genes chr3L 4146917 intergenic not near genes chr3L_11_4145001 chr3L_4145001 RAL-304_75b 427 chr3L 4328753 4328761 chr3L 4336250 4336258 412 6 7496 0.0 5.5 2.8 1.6 7505 chr3L 4328753 intron Cip4 - chr3L 4332506 intron Cip4 - chr3L 4336258 intron Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-304_75b 428 chr3L 4397968 4397976 chr3L 4398187 4398195 4 219 3.0 2.0 2.5 1.1 227 chr3L 4397968 intron slow + chr3L 4398082 intron slow + chr3L 4398195 intron slow + chr3L_4_4395001 chr3L_4395001 RAL-304_75b 429 chr3L 4503922 4503925 chr3L 4503998 4504001 5 77 1.0 0.0 0.5 3.3 79 chr3L 4503922 intron NT1 - chr3L 4503962 intron NT1 - chr3L 4504001 intron NT1 - chr3L_5_4500001 chr3L_4500001 RAL-304_75b 430 chr3L 4725338 4725354 chr3L 4725426 4725442 4 88 2.0 3.0 2.5 1.1 104 chr3L 4725338 intron RhoGEF64C + chr3L 4725390 intron RhoGEF64C + chr3L 4725442 intron RhoGEF64C + chr3L_4_4725001 chr3L_4725001 RAL-304_75b 431 chr3L 4858310 4858320 chr3L 4858400 4858410 4 90 0.5 4.0 2.2 1.2 100 chr3L 4858310 intergenic not near genes chr3L 4858360 intergenic not near genes chr3L 4858410 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-304_75b 432 chr3L 4901126 4901146 chr3L 4907316 4907336 diver 9 6190 3.0 0.0 1.5 3.6 6210 chr3L 4901126 intergenic CG13704 + chr3L 4904231 intergenic not near genes chr3L 4907336 intergenic not near genes chr3L_9_4900001 chr3L_4900001 RAL-304_75b 433 chr3L 5104489 5104511 chr3L 5124623 5124644 7 20134 0.0 5.5 2.8 1.8 20155 chr3L 5104489 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124644 intergenic not near genes chr3L_7_5110001 chr3L_5110001 RAL-304_75b 434 chr3L 5297584 5297598 chr3L 5297700 5297713 10 115 2.5 2.0 2.2 3.1 129 chr3L 5297584 intergenic not near genes chr3L 5297648 intergenic not near genes chr3L 5297713 intergenic not near genes chr3L_10_5295001 chr3L_5295001 RAL-304_75b 435 chr3L 5396491 5396499 chr3L 5396578 5396586 4 87 0.0 1.0 0.5 2.7 95 chr3L 5396491 intergenic not near genes chr3L 5396538 intergenic not near genes chr3L 5396586 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-304_75b 436 chr3L 5493211 5493212 chr3L 5493357 5493358 4 146 3.0 6.0 4.5 0.7 147 chr3L 5493211 intergenic CR44520 - chr3L 5493284 intergenic CR44520 - chr3L 5493358 intergenic CR44520 - chr3L_4_5490001 chr3L_5490001 RAL-304_75b 437 chr3L 5522004 5522033 chr3L 5522272 5522301 7 268 5.0 1.5 3.2 1.7 297 chr3L 5522004 intron Lkr - chr3L 5522152 intron Lkr - chr3L 5522301 intron Lkr - chr3L_7_5520001 chr3L_5520001 RAL-304_75b 438 chr3L 5527175 5527195 chr3L 5527280 5527300 6 105 0.0 4.0 2.0 2.0 125 chr3L 5527175 intron Lkr - chr3L 5527238 intron Lkr - chr3L 5527300 intron Lkr - chr3L_6_5525001 chr3L_5525001 RAL-304_75b 439 chr3L 5537722 5537743 chr3L 5538061 5538084 jockey 5 340 2.0 0.0 1.0 2.5 362 chr3L 5537722 intergenic not near genes chr3L 5537903 intergenic not near genes chr3L 5538084 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-304_75b 440 chr3L 5572139 5572156 chr3L 5572249 5572266 5 110 0.0 0.0 0.0 5.0 127 chr3L 5572139 intron Msr-110 - chr3L 5572202 intron Msr-110 - chr3L 5572266 intron Msr-110 - chr3L_5_5570001 chr3L_5570001 RAL-304_75b 441 chr3L 5910032 5910051 chr3L 5910273 5910292 pogo 4 241 1.5 4.5 3.0 1.0 260 chr3L 5910032 intron CG13288 + chr3L 5910162 intron CG13288 + chr3L 5910292 intron CG13288 + chr3L_4_5910001 chr3L_5910001 RAL-304_75b 442 chr3L 6001685 6001685 chr3L 6004384 6004385 jockey 5 2700 3.5 0.0 1.8 1.8 2700 chr3L 6001685 intron PVRAP + chr3L 6003035 intron PVRAP + chr3L 6004385 intron PVRAP + chr3L_5_6000001 chr3L_6000001 RAL-304_75b 443 chr3L 6040378 6040387 chr3L 6042734 6042743 Doc 8 2355 2.0 0.0 1.0 4.0 2365 chr3L 6040378 intergenic Jon65Aiv + chr3L 6041560 intergenic not near genes chr3L 6042743 intergenic not near genes chr3L_8_6040001 chr3L_6040001 RAL-304_75b 444 chr3L 6063953 6063964 chr3L 6064036 6064048 6 84 0.0 0.0 0.0 6.0 95 chr3L 6063953 intergenic not near genes chr3L 6064000 intergenic not near genes chr3L 6064048 intergenic not near genes chr3L_6_6060001 chr3L_6060001 RAL-304_75b 445 chr3L 6119155 6119168 chr3L 6119232 6119244 4 77 0.5 0.0 0.2 3.3 89 chr3L 6119155 intron Ets65A + chr3L 6119200 intron Ets65A + chr3L 6119244 intron Ets65A + chr3L_4_6115001 chr3L_6115001 RAL-304_75b 446 chr3L 6335022 6335026 chr3L 6335493 6335497 297 5 471 3.0 2.5 2.8 1.3 475 chr3L 6335022 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335497 intron CG13300 - chr3L_5_6335001 chr3L_6335001 RAL-304_75b 447 chr3L 6372132 6372141 chr3L 6372216 6372226 8 84 1.0 0.0 0.5 5.3 94 chr3L 6372132 intergenic not near genes chr3L 6372179 intergenic not near genes chr3L 6372226 intergenic not near genes chr3L_8_6370001 chr3L_6370001 RAL-304_75b 448 chr3L 6642873 6642887 chr3L 6642952 6642967 5 80 0.0 0.0 0.0 5.0 94 chr3L 6642873 intergenic CR45239 + chr3L 6642920 intergenic CR45239 + chr3L 6642967 intergenic CR45239 + chr3L_5_6640001 chr3L_6640001 RAL-304_75b 449 chr3L 6808890 6808916 chr3L 6809355 6809381 7 464 0.5 0.0 0.2 5.8 491 chr3L 6808890 intergenic not near genes chr3L 6809136 intergenic not near genes chr3L 6809381 intergenic not near genes chr3L_7_6805001 chr3L_6805001 RAL-304_75b 450 chr3L 6887518 6887538 chr3L 6895010 6895029 roo 8 7492 0.5 1.0 0.8 4.4 7511 chr3L 6887518 intergenic not near genes chr3L 6891274 intergenic not near genes chr3L 6895029 intergenic not near genes chr3L_8_6890001 chr3L_6890001 RAL-304_75b 451 chr3L 7187411 7187418 chr3L 7187492 7187500 7 81 0.0 0.0 0.0 7.0 89 chr3L 7187411 intron Dscam2 - chr3L 7187456 intron Dscam2 - chr3L 7187500 intron Dscam2 - chr3L_7_7185001 chr3L_7185001 RAL-304_75b 452 chr3L 7264891 7264894 chr3L 7264974 7264974 4 82 0.0 0.0 0.0 4.0 83 chr3L 7264891 intergenic not near genes chr3L 7264932 intergenic not near genes chr3L 7264974 intergenic not near genes chr3L_4_7260001 chr3L_7260001 RAL-304_75b 453 chr3L 7285460 7285465 chr3L 7285538 7285543 7 78 0.5 3.5 2.0 2.3 83 chr3L 7285460 intron unc-13-4A - chr3L 7285502 intron unc-13-4A - chr3L 7285543 intron unc-13-4A - chr3L_7_7285001 chr3L_7285001 RAL-304_75b 454 chr3L 7328952 7328967 chr3L 7329033 7329048 4 81 2.0 1.5 1.8 1.4 96 chr3L 7328952 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7329000 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329048 intergenic CG42307 +,mus312 +,CG8602 - chr3L_4_7325001 chr3L_7325001 RAL-304_75b 455 chr3L 7442951 7442954 chr3L 7443045 7443049 5 94 0.0 0.0 0.0 5.0 98 chr3L 7442951 intron CG42458 + chr3L 7443000 intron CG42458 + chr3L 7443049 intron CG42458 + chr3L_5_7440001 chr3L_7440001 RAL-304_75b 456 chr3L 7498760 7498773 chr3L 7503537 7503549 F-element 4 4777 1.5 1.0 1.2 1.8 4789 chr3L 7498760 5` UTR CG8539 - chr3L 7501154 intergenic not near genes chr3L 7503549 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-304_75b 457 chr3L 7727161 7727175 chr3L 7727242 7727256 5 81 1.0 0.0 0.5 3.3 95 chr3L 7727161 intron CG32373 + chr3L 7727208 intron CG32373 + chr3L 7727256 intron CG32373 + chr3L_5_7725001 chr3L_7725001 RAL-304_75b 458 chr3L 7749470 7749472 chr3L 11777678 11777678 4 4028207 10.0 3.5 6.8 0.5 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_9760001 chr3L_9760001 RAL-304_75b 459 chr3L 7845392 7845409 chr3L 7845475 7845491 5 83 0.0 0.5 0.2 4.2 99 chr3L 7845392 intron Pdp1 - chr3L 7845442 intron Pdp1 - chr3L 7845491 intron Pdp1 - chr3L_5_7845001 chr3L_7845001 RAL-304_75b 460 chr3L 7916830 7916847 chr3L 7926001 7926018 roo 4 9171 2.0 1.0 1.5 1.6 9188 chr3L 7916830 3` UTR syd - chr3L 7921424 intron syd - chr3L 7926018 3` UTR syd - chr3L_4_7920001 chr3L_7920001 RAL-304_75b 461 chr3L 8041559 8041559 chr3L 8041634 8041637 4 77 3.5 2.5 3.0 1.0 78 chr3L 8041559 intron nmo + chr3L 8041598 intron nmo + chr3L 8041637 intron nmo + chr3L_4_8040001 chr3L_8040001 RAL-304_75b 462 chr3L 8219564 8219564 chr3L 8219854 8219855 4 291 3.5 0.0 1.8 1.4 291 chr3L 8219564 intergenic not near genes chr3L 8219710 intergenic not near genes chr3L 8219855 intergenic not near genes chr3L_4_8215001 chr3L_8215001 RAL-304_75b 463 chr3L 8396108 8396124 chr3L 8396183 8396202 8 77 2.0 0.5 1.2 3.6 94 chr3L 8396108 5` UTR CG7120 + chr3L 8396155 5` UTR CG7120 + chr3L 8396202 intron CG7120 + chr3L_8_8395001 chr3L_8395001 RAL-304_75b 464 chr3L 8481785 8481801 chr3L 8490939 8490960 roo 7 9157 1.5 0.0 0.8 3.9 9175 chr3L 8481785 intron CG43163 - chr3L 8486372 intron CG43163 - chr3L 8490960 intron CG43163 - chr3L_7_8485001 chr3L_8485001 RAL-304_75b 465 chr3L 8827569 8827573 chr3L 8827645 8827649 4 76 0.0 4.5 2.2 1.2 80 chr3L 8827569 5` UTR dally + chr3L 8827609 5` UTR dally + chr3L 8827649 5` UTR dally + chr3L_4_8825001 chr3L_8825001 RAL-304_75b 466 chr3L 8839730 8839738 chr3L 8839810 8839817 7 80 2.0 0.5 1.2 3.2 87 chr3L 8839730 intron dally + chr3L 8839774 intron dally + chr3L 8839817 intron dally + chr3L_7_8835001 chr3L_8835001 RAL-304_75b 467 chr3L 9013690 9013691 chr3L 18417066 18417066 4 9403375 14.5 8.0 11.2 0.3 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-304_75b 468 chr3L 9076928 9076953 chr3L 9084488 9084513 412 5 7560 2.5 2.5 2.5 1.4 7585 chr3L 9076928 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084513 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-304_75b 469 chr3L 9164699 9164715 chr3L 9166166 9166181 hobo 11 1467 1.5 0.0 0.8 6.1 1482 chr3L 9164699 intron Rdl - chr3L 9165440 intron Rdl - chr3L 9166181 intron Rdl - chr3L_11_9165001 chr3L_9165001 RAL-304_75b 470 chr3L 9219250 9219268 chr3L 9219919 9219940 jockey 4 671 3.0 1.5 2.2 1.2 690 chr3L 9219250 intergenic not near genes chr3L 9219595 intergenic not near genes chr3L 9219940 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-304_75b 471 chr3L 9270615 9270636 chr3L 9278370 9278391 roo 4 7755 1.5 0.0 0.8 2.2 7776 chr3L 9270615 intron GluRIB + chr3L 9274503 intron GluRIB + chr3L 9278391 exon GluRIB + chr3L_4_9270001 chr3L_9270001 RAL-304_75b 472 chr3L 9443518 9443536 chr3L 9445309 9445327 S-element 8 1791 0.5 1.0 0.8 4.4 1809 chr3L 9443518 intron CG33926 + chr3L 9444422 intron CG33926 + chr3L 9445327 intron CG33926 + chr3L_8_9440001 chr3L_9440001 RAL-304_75b 473 chr3L 9571905 9571933 chr3L 9572253 9572281 jockey 9 348 2.5 0.0 1.2 4.1 376 chr3L 9571905 intron CG42673 + chr3L 9572093 intron CG42673 + chr3L 9572281 intron CG42673 + chr3L_9_9570001 chr3L_9570001 RAL-304_75b 474 chr3L 9575936 9575940 chr3L 9581012 9581015 jockey 8 5076 0.0 0.5 0.2 6.7 5079 chr3L 9575936 intron CG42673 + chr3L 9578476 intron CG42673 + chr3L 9581015 intron CG42673 + chr3L_8_9575001 chr3L_9575001 RAL-304_75b 475 chr3L 9758740 9758741 chr3L 9758824 9758824 4 84 0.0 2.0 1.0 2.0 84 chr3L 9758740 intron CG42268 - chr3L 9758782 intron CG42268 - chr3L 9758824 intron CG42268 - chr3L_4_9755001 chr3L_9755001 RAL-304_75b 476 chr3L 9775382 9775397 chr3L 9775739 9775757 7 359 0.0 0.0 0.0 7.0 375 chr3L 9775382 intron CG8177 + chr3L 9775570 intron CG8177 + chr3L 9775757 intron CG8177 + chr3L_7_9775001 chr3L_9775001 RAL-304_75b 477 chr3L 10027964 10027977 chr3L 10028059 10028071 7 94 2.5 2.5 2.5 2.0 107 chr3L 10027964 intron dpr6 + chr3L 10028018 intron dpr6 + chr3L 10028071 intron dpr6 + chr3L_7_10025001 chr3L_10025001 RAL-304_75b 478 chr3L 10298681 10298702 chr3L 10298768 10298789 7 86 0.5 4.0 2.2 2.2 108 chr3L 10298681 intergenic not near genes chr3L 10298735 intergenic not near genes chr3L 10298789 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-304_75b 479 chr3L 10308761 10308775 chr3L 10308838 10308852 5 77 0.0 1.5 0.8 2.8 91 chr3L 10308761 intergenic not near genes chr3L 10308806 intergenic not near genes chr3L 10308852 intergenic not near genes chr3L_5_10305001 chr3L_10305001 RAL-304_75b 480 chr3L 10414952 10414968 chr3L 10417324 10417340 Doc 6 2372 0.5 1.5 1.0 3.0 2388 chr3L 10414952 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417340 intergenic not near genes chr3L_6_10415001 chr3L_10415001 RAL-304_75b 481 chr3L 10600457 10600468 chr3L 10600539 10600550 4 82 3.0 0.5 1.8 1.4 93 chr3L 10600457 intergenic not near genes chr3L 10600504 intergenic not near genes chr3L 10600550 intergenic not near genes chr3L_4_10600001 chr3L_10600001 RAL-304_75b 482 chr3L 10621864 10621877 chr3L 10621951 10621964 4 87 1.0 0.0 0.5 2.7 100 chr3L 10621864 intergenic not near genes chr3L 10621914 intergenic not near genes chr3L 10621964 intergenic not near genes chr3L_4_10620001 chr3L_10620001 RAL-304_75b 483 chr3L 10658092 10658198 chr3L 10658168 10658325 5 107 0.0 0.0 0.0 5.0 233 chr3L 10658092 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658325 intron CG32066 - chr3L_5_10655001 chr3L_10655001 RAL-304_75b 484 chr3L 11087090 11087090 chr3L 11088879 11088879 S-element 5 1789 1.5 5.5 3.5 1.1 1789 chr3L 11087090 intron JIL-1 - chr3L 11087984 intron JIL-1 - chr3L 11088879 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-304_75b 485 chr3L 11105302 11105326 chr3L 11107012 11107036 X-element 4 1710 1.0 0.0 0.5 2.7 1734 chr3L 11105302 intergenic not near genes chr3L 11106169 intergenic not near genes chr3L 11107036 exon CG32073 - chr3L_4_11105001 chr3L_11105001 RAL-304_75b 486 chr3L 11121589 11121613 chr3L 11122996 11123020 8 1408 11.0 14.5 12.8 0.6 1431 chr3L 11121589 exon mRpL2 + chr3L 11122304 exon Ufd1-like - chr3L 11123020 exon Ufd1-like - chr3L_8_11120001 chr3L_11120001 RAL-304_75b 487 chr3L 11127932 11127934 chr3L 11128035 11128035 4 102 2.0 0.0 1.0 2.0 103 chr3L 11127932 intron CG42575 + chr3L 11127984 intron CG42575 + chr3L 11128035 intron CG42575 + chr3L_4_11125001 chr3L_11125001 RAL-304_75b 488 chr3L 11135781 11135796 chr3L 11135866 11135881 6 85 0.0 1.0 0.5 4.0 100 chr3L 11135781 intergenic CG32082 +,CG14143 + chr3L 11135831 intergenic CG32082 +,CG14143 + chr3L 11135881 intergenic CG32082 +,CG14143 + chr3L_6_11135001 chr3L_11135001 RAL-304_75b 489 chr3L 11145552 11145557 chr3L 11145642 11145647 4 90 0.0 1.0 0.5 2.7 95 chr3L 11145552 intron CG32082 + chr3L 11145600 intron CG32082 + chr3L 11145647 intron CG32082 + chr3L_4_11145001 chr3L_11145001 RAL-304_75b 490 chr3L 11264484 11264492 chr3L 11271436 11271444 17.6 5 6951 3.0 4.0 3.5 1.1 6960 chr3L 11264484 intergenic not near genes chr3L 11267964 intergenic not near genes chr3L 11271444 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-304_75b 491 chr3L 11329690 11329728 chr3L 11332895 11332933 jockey 8 3205 0.0 3.5 1.8 2.9 3243 chr3L 11329690 intergenic not near genes chr3L 11331312 intergenic not near genes chr3L 11332933 intergenic not near genes chr3L_8_11330001 chr3L_11330001 RAL-304_75b 492 chr3L 11465793 11465796 chr3L 11465873 11465877 4 81 0.0 4.5 2.2 1.2 84 chr3L 11465793 5` UTR CG6140 - chr3L 11465835 5` UTR CG6140 - chr3L 11465877 intergenic CG6140 - chr3L_4_11465001 chr3L_11465001 RAL-304_75b 493 chr3L 11744012 11744039 chr3L 11744120 11744147 4 108 0.0 0.0 0.0 4.0 135 chr3L 11744012 exon CG6024 - chr3L 11744080 intron CG6024 - chr3L 11744147 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-304_75b 494 chr3L 11840162 11840188 chr3L 11840356 11840382 5 194 1.5 0.0 0.8 2.8 220 chr3L 11840162 intergenic not near genes chr3L 11840272 intergenic not near genes chr3L 11840382 intergenic not near genes chr3L_5_11840001 chr3L_11840001 RAL-304_75b 495 chr3L 11864554 11864558 chr3L 11865848 11865849 pogo 5 1294 4.0 0.0 2.0 1.7 1295 chr3L 11864554 intron CG44837 - chr3L 11865202 intron CG44837 - chr3L 11865849 intron CG44837 - chr3L_5_11865001 chr3L_11865001 RAL-304_75b 496 chr3L 11943508 11943520 chr3L 11943608 11943621 7 101 1.0 3.0 2.0 2.3 113 chr3L 11943508 intergenic Rpt4R +,CG5883 - chr3L 11943564 intergenic CG5883 -,Rpt4R + chr3L 11943621 intergenic CG5883 -,Rpt4R + chr3L_7_11940001 chr3L_11940001 RAL-304_75b 497 chr3L 12013913 12013930 chr3L 12014004 12014021 6 91 1.0 0.0 0.5 4.0 108 chr3L 12013913 intron rols - chr3L 12013967 intron rols - chr3L 12014021 intron rols - chr3L_6_12010001 chr3L_12010001 RAL-304_75b 498 chr3L 12052703 12052726 chr3L 12052792 12052815 5 89 2.5 0.0 1.2 2.3 112 chr3L 12052703 intron rols - chr3L 12052759 intron rols - chr3L 12052815 intron rols - chr3L_5_12050001 chr3L_12050001 RAL-304_75b 499 chr3L 12183202 12183231 chr3L 12183282 12183311 9 80 0.5 1.5 1.0 4.5 109 chr3L 12183202 3` UTR CAH2 + chr3L 12183256 3` UTR CAH2 + chr3L 12183311 3` UTR CAH2 + chr3L_9_12180001 chr3L_12180001 RAL-304_75b 500 chr3L 12231372 12231405 chr3L 12231672 12231704 10 300 9.0 9.0 9.0 1.0 332 chr3L 12231372 intron app - chr3L 12231538 intron app - chr3L 12231704 intron app - chr3L_10_12230001 chr3L_12230001 RAL-304_75b 501 chr3L 12353925 12353941 chr3L 12354014 12354030 6 89 0.0 0.5 0.2 5.0 105 chr3L 12353925 intergenic not near genes chr3L 12353978 intergenic not near genes chr3L 12354030 intergenic not near genes chr3L_6_12350001 chr3L_12350001 RAL-304_75b 502 chr3L 12446290 12446297 chr3L 12446368 12446375 7 77 0.5 2.0 1.2 3.2 85 chr3L 12446290 intergenic not near genes chr3L 12446332 intergenic not near genes chr3L 12446375 intergenic not near genes chr3L_7_12445001 chr3L_12445001 RAL-304_75b 503 chr3L 12458485 12458500 chr3L 12458583 12458597 6 98 0.0 0.0 0.0 6.0 112 chr3L 12458485 intergenic not near genes chr3L 12458541 intergenic not near genes chr3L 12458597 intergenic not near genes chr3L_6_12455001 chr3L_12455001 RAL-304_75b 504 chr3L 12491708 12491710 chr3L 12491791 12491791 4 82 0.0 0.5 0.2 3.3 83 chr3L 12491708 intergenic CG10657 -,CR45682 + chr3L 12491750 intergenic CG10657 -,CR45682 + chr3L 12491791 intergenic CG10657 -,CR45682 + chr3L_4_12490001 chr3L_12490001 RAL-304_75b 505 chr3L 12612581 12612606 chr3L 12612674 12612697 7 92 1.5 1.0 1.2 3.2 116 chr3L 12612581 intron caup + chr3L 12612639 intron caup + chr3L 12612697 intron caup + chr3L_7_12610001 chr3L_12610001 RAL-304_75b 506 chr3L 12633185 12633185 chr3L 13180586 13180587 5 547402 3.5 1.0 2.2 1.6 547402 chr3L 12633185 intron CR32111 + chr3L 12906886 intergenic not near genes chr3L 13180587 intergenic not near genes chr3L_5_12905001 chr3L_12905001 RAL-304_75b 507 chr3L 12720340 12720349 chr3L 12720425 12720434 9 85 0.5 0.0 0.2 7.5 94 chr3L 12720340 intergenic not near genes chr3L 12720387 intergenic not near genes chr3L 12720434 intergenic not near genes chr3L_9_12720001 chr3L_12720001 RAL-304_75b 508 chr3L 12874929 12874946 chr3L 12877221 12877238 jockey 6 2292 5.5 5.5 5.5 0.9 2309 chr3L 12874929 intergenic not near genes chr3L 12876084 intergenic not near genes chr3L 12877238 intergenic not near genes chr3L_6_12875001 chr3L_12875001 RAL-304_75b 509 chr3L 12894811 12894817 chr3L 12894888 12894893 5 77 3.0 2.5 2.8 1.3 82 chr3L 12894811 intergenic CG14118 + chr3L 12894852 intergenic CG14118 + chr3L 12894893 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-304_75b 510 chr3L 12967136 12967159 chr3L 12967219 12967243 7 83 7.0 0.0 3.5 1.6 107 chr3L 12967136 exon Or69a - chr3L 12967190 exon Or69a - chr3L 12967243 exon Or69a - chr3L_7_12965001 chr3L_12965001 RAL-304_75b 511 chr3L 13031576 13031592 chr3L 13031662 13031678 4 86 5.5 0.5 3.0 1.0 102 chr3L 13031576 intron CG17672 + chr3L 13031627 intron CG17672 + chr3L 13031678 intron CG17672 + chr3L_4_13030001 chr3L_13030001 RAL-304_75b 512 chr3L 13223215 13223224 chr3L 13223291 13223301 6 76 0.0 2.5 1.2 2.7 86 chr3L 13223215 intergenic not near genes chr3L 13223258 intergenic not near genes chr3L 13223301 intergenic not near genes chr3L_6_13220001 chr3L_13220001 RAL-304_75b 513 chr3L 13280313 13280328 chr3L 13280417 13280432 9 104 2.0 4.5 3.2 2.1 119 chr3L 13280313 intergenic not near genes chr3L 13280372 intergenic not near genes chr3L 13280432 intergenic not near genes chr3L_9_13280001 chr3L_13280001 RAL-304_75b 514 chr3L 13559963 13559997 chr3L 13560049 13560083 9 86 0.0 0.0 0.0 9.0 120 chr3L 13559963 intron bru-3 - chr3L 13560023 intron bru-3 - chr3L 13560083 intron bru-3 - chr3L_9_13560001 chr3L_13560001 RAL-304_75b 515 chr3L 13689398 13689413 chr3L 13689476 13689490 5 78 1.0 2.5 1.8 1.8 92 chr3L 13689398 intron bru-3 - chr3L 13689444 intron bru-3 - chr3L 13689490 intron bru-3 - chr3L_5_13685001 chr3L_13685001 RAL-304_75b 516 chr3L 13804548 13804574 chr3L 13822834 13822860 roo 7 18285 0.5 5.5 3.0 1.8 18312 chr3L 13804548 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822860 intergenic not near genes chr3L_7_13810001 chr3L_13810001 RAL-304_75b 517 chr3L 14076304 14076313 chr3L 14076382 14076391 5 78 0.0 0.5 0.2 4.2 87 chr3L 14076304 intron btl + chr3L 14076348 intron btl + chr3L 14076391 intron btl + chr3L_5_14075001 chr3L_14075001 RAL-304_75b 518 chr3L 14175362 14175375 chr3L 14175510 14175523 6 148 1.0 1.5 1.2 2.7 161 chr3L 14175362 intergenic D - chr3L 14175442 intergenic D - chr3L 14175523 intergenic D - chr3L_6_14175001 chr3L_14175001 RAL-304_75b 519 chr3L 14199357 14199372 chr3L 14199447 14199463 12 90 0.0 5.5 2.8 3.2 106 chr3L 14199357 intron nuf + chr3L 14199410 intron nuf + chr3L 14199463 intron nuf + chr3L_12_14195001 chr3L_14195001 RAL-304_75b 520 chr3L 14211440 14211458 chr3L 14211518 14211536 5 78 1.5 0.0 0.8 2.8 96 chr3L 14211440 intron nuf + chr3L 14211488 intron nuf + chr3L 14211536 intron nuf + chr3L_5_14210001 chr3L_14210001 RAL-304_75b 521 chr3L 14215066 14215086 chr3L 14215146 14215166 6 79 0.5 2.0 1.2 2.7 100 chr3L 14215066 intron nuf + chr3L 14215116 intron nuf + chr3L 14215166 intron nuf + chr3L_6_14215001 chr3L_14215001 RAL-304_75b 522 chr3L 14245578 14245585 chr3L 14245670 14245679 1360 7 93 2.5 1.0 1.8 2.5 101 chr3L 14245578 3` UTR CR44561 - chr3L 14245628 3` UTR CR44561 - chr3L 14245679 3` UTR CR44561 - chr3L_7_14245001 chr3L_14245001 RAL-304_75b 523 chr3L 14295991 14296014 chr3L 14296477 14296500 roo 6 486 0.5 0.0 0.2 5.0 509 chr3L 14295991 intron fz + chr3L 14296246 intron fz + chr3L 14296500 intron fz + chr3L_6_14295001 chr3L_14295001 RAL-304_75b 524 chr3L 14312028 14312054 chr3L 14316842 14316865 X-element 5 4813 0.5 0.0 0.2 4.2 4837 chr3L 14312028 exon fz + chr3L 14314446 intron fz + chr3L 14316865 intron fz + chr3L_5_14310001 chr3L_14310001 RAL-304_75b 525 chr3L 14522104 14522107 chr3L 14522203 14522206 4 98 0.0 0.0 0.0 4.0 102 chr3L 14522104 intron bbg - chr3L 14522155 intron bbg - chr3L 14522206 intron bbg - chr3L_4_14520001 chr3L_14520001 RAL-304_75b 526 chr3L 14960008 14960016 chr3L 14960092 14960100 5 84 0.0 0.0 0.0 5.0 92 chr3L 14960008 intergenic not near genes chr3L 14960054 intergenic not near genes chr3L 14960100 intergenic not near genes chr3L_5_14960001 chr3L_14960001 RAL-304_75b 527 chr3L 15085069 15085081 chr3L 15086235 15086247 1360 5 1165 1.0 2.0 1.5 2.0 1178 chr3L 15085069 intron cp309 - chr3L 15085658 intron cp309 - chr3L 15086247 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-304_75b 528 chr3L 15261722 15261726 chr3L 22908066 22908067 6 7646342 2.5 9.5 6.0 0.9 7646345 chr3L 15261722 intergenic not near genes chr3L 19084894 intron Mkp3 - chr3L 22908067 intergenic not near genes chr3L_6_19080001 chr3L_19080001 RAL-304_75b 529 chr3L 15273165 15273180 chr3L 15273250 15273265 5 84 1.0 3.0 2.0 1.7 100 chr3L 15273165 intergenic not near genes chr3L 15273215 intergenic not near genes chr3L 15273265 intergenic not near genes chr3L_5_15270001 chr3L_15270001 RAL-304_75b 530 chr3L 15423759 15423777 chr3L 15426603 15426621 opus 5 2843 1.0 0.5 0.8 2.8 2862 chr3L 15423759 intergenic not near genes chr3L 15425190 intergenic not near genes chr3L 15426621 intergenic not near genes chr3L_5_15425001 chr3L_15425001 RAL-304_75b 531 chr3L 15443603 15443614 chr3L 15443679 15443690 5 76 1.0 2.0 1.5 2.0 87 chr3L 15443603 intergenic not near genes chr3L 15443646 intergenic not near genes chr3L 15443690 intergenic not near genes chr3L_5_15440001 chr3L_15440001 RAL-304_75b 532 chr3L 15466042 15466128 chr3L 15466124 15466224 7 86 0.0 0.0 0.0 7.0 182 chr3L 15466042 intergenic not near genes chr3L 15466133 intergenic not near genes chr3L 15466224 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-304_75b 533 chr3L 15466524 15466551 chr3L 15466607 15466635 7 84 0.0 1.0 0.5 4.7 111 chr3L 15466524 intergenic not near genes chr3L 15466580 intergenic not near genes chr3L 15466635 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-304_75b 534 chr3L 15541619 15541647 chr3L 15541709 15541738 6 91 2.0 0.0 1.0 3.0 119 chr3L 15541619 intron CrebA + chr3L 15541678 intron CrebA + chr3L 15541738 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-304_75b 535 chr3L 15541971 15541977 chr3L 15542063 15542071 4 94 0.5 0.0 0.2 3.3 100 chr3L 15541971 intron CrebA + chr3L 15542021 intron CrebA + chr3L 15542071 intron CrebA + chr3L_4_15540001 chr3L_15540001 RAL-304_75b 536 chr3L 15695976 15696010 chr3L 15696053 15696088 9 77 1.0 0.0 0.5 6.0 112 chr3L 15695976 intergenic not near genes chr3L 15696032 intergenic not near genes chr3L 15696088 intergenic not near genes chr3L_9_15695001 chr3L_15695001 RAL-304_75b 537 chr3L 16126324 16126341 chr3L 16130758 16130775 4 4434 5.5 6.0 5.8 0.6 4451 chr3L 16126324 intron Pgm - chr3L 16128550 intergenic Pgm - chr3L 16130775 3` UTR SsRbeta + chr3L_4_16125001 chr3L_16125001 RAL-304_75b 538 chr3L 16184113 16184132 chr3L 16188932 16188951 X-element 5 4819 0.0 0.0 0.0 5.0 4838 chr3L 16184113 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188951 intergenic not near genes chr3L_5_16185001 chr3L_16185001 RAL-304_75b 539 chr3L 16212817 16212840 chr3L 16212908 16212931 5 91 0.0 0.0 0.0 5.0 114 chr3L 16212817 intergenic CG13073 - chr3L 16212874 intergenic CG13073 - chr3L 16212931 intergenic CG13073 - chr3L_5_16210001 chr3L_16210001 RAL-304_75b 540 chr3L 16325568 16325584 chr3L 16325663 16325678 4 94 0.0 1.0 0.5 2.7 110 chr3L 16325568 exon CG13040 - chr3L 16325623 exon CG13040 - chr3L 16325678 exon CG13040 - chr3L_4_16325001 chr3L_16325001 RAL-304_75b 541 chr3L 16431847 16431855 chr3L 16431942 16431950 5 95 0.0 0.0 0.0 5.0 103 chr3L 16431847 intron,intron CG33158 +,dsx-c73A - chr3L 16431898 intron,intron CG33158 +,dsx-c73A - chr3L 16431950 intron,intron CG33158 +,dsx-c73A - chr3L_5_16430001 chr3L_16430001 RAL-304_75b 542 chr3L 16443859 16443862 chr3L 16446196 16446202 Doc 5 2339 1.0 1.5 1.2 2.3 2343 chr3L 16443859 intron,intron CG33158 +,dsx-c73A - chr3L 16445030 intron,intron CG33158 +,dsx-c73A - chr3L 16446202 intron,intron CG33158 +,dsx-c73A - chr3L_5_16445001 chr3L_16445001 RAL-304_75b 543 chr3L 16509408 16509424 chr3L 16509557 16509575 12 150 1.5 1.5 1.5 4.8 167 chr3L 16509408 intron CG43373 - chr3L 16509492 intron CG43373 - chr3L 16509575 intron CG43373 - chr3L_12_16505001 chr3L_16505001 RAL-304_75b 544 chr3L 16616511 16616539 chr3L 16621836 16621867 297 9 5327 5.5 3.0 4.2 1.7 5356 chr3L 16616511 3` UTR Abl - chr3L 16619189 3` UTR Abl - chr3L 16621867 3` UTR Abl - chr3L_9_16615001 chr3L_16615001 RAL-304_75b 545 chr3L 16945738 16945747 chr3L 16954891 16954900 roo 7 9151 1.0 0.0 0.5 4.7 9162 chr3L 16945738 exon Obp73a + chr3L 16950319 intergenic not near genes chr3L 16954900 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-304_75b 546 chr3L 17008444 17008463 chr3L 17008526 17008543 7 82 1.5 0.0 0.8 3.9 99 chr3L 17008444 intron CG3764 - chr3L 17008494 intron CG3764 - chr3L 17008543 intron CG3764 - chr3L_7_17005001 chr3L_17005001 RAL-304_75b 547 chr3L 17085004 17085027 chr3L 17094153 17094176 roo 8 9149 0.5 0.0 0.2 6.7 9172 chr3L 17085004 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094176 intron Rbp6 - chr3L_8_17085001 chr3L_17085001 RAL-304_75b 548 chr3L 17103129 17103129 chr3L 17103203 17103206 4 76 5.0 3.0 4.0 0.8 77 chr3L 17103129 intron Rbp6 - chr3L 17103168 intron Rbp6 - chr3L 17103206 intron Rbp6 - chr3L_4_17100001 chr3L_17100001 RAL-304_75b 549 chr3L 17120662 17120670 chr3L 17120738 17120746 6 76 3.0 3.5 3.2 1.4 84 chr3L 17120662 intron Rbp6 - chr3L 17120704 intron Rbp6 - chr3L 17120746 intron Rbp6 - chr3L_6_17120001 chr3L_17120001 RAL-304_75b 550 chr3L 17149164 17149183 chr3L 17149245 17149264 5 81 2.5 0.0 1.2 2.3 100 chr3L 17149164 intron Rbp6 - chr3L 17149214 intron Rbp6 - chr3L 17149264 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-304_75b 551 chr3L 17516983 17516994 chr3L 17524541 17524552 412 4 7558 3.5 0.0 1.8 1.4 7569 chr3L 17516983 intron CG7564 + chr3L 17520768 intron CG7564 + chr3L 17524552 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-304_75b 552 chr3L 698687 698687 chr3L 17783335 17783338 4 17084650 2.0 4.0 3.0 1.0 17084651 chr3L 698687 intron CG13894 - chr3L 9241012 intergenic not near genes chr3L 17783338 intergenic not near genes chr3L_4_9240001 chr3L_9240001 RAL-304_75b 553 chr3L 17799809 17799830 chr3L 17801596 17801616 S-element 4 1787 3.5 3.0 3.2 1.0 1807 chr3L 17799809 intron NUCB1 - chr3L 17800712 intron NUCB1 - chr3L 17801616 intron NUCB1 - chr3L_4_17800001 chr3L_17800001 RAL-304_75b 554 chr3L 17991582 17991604 chr3L 17991659 17991682 5 78 0.0 2.5 1.2 2.3 100 chr3L 17991582 intron Eip75B - chr3L 17991632 intron Eip75B - chr3L 17991682 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-304_75b 555 chr3L 18106277 18106282 chr3L 18106396 18106401 4 119 1.5 1.5 1.5 1.6 124 chr3L 18106277 intergenic CG13698 -,mRpS26 + chr3L 18106339 intergenic CG13698 -,mRpS26 + chr3L 18106401 intergenic mRpS26 +,CG13698 - chr3L_4_18105001 chr3L_18105001 RAL-304_75b 556 chr3L 18329373 18329397 chr3L 18329460 18329483 11 86 0.5 1.0 0.8 6.1 110 chr3L 18329373 intergenic not near genes chr3L 18329428 intergenic not near genes chr3L 18329483 intergenic not near genes chr3L_11_18325001 chr3L_18325001 RAL-304_75b 557 chr3L 18506136 18506147 chr3L 18509598 18509610 F-element 5 3462 2.0 0.0 1.0 2.5 3474 chr3L 18506136 intergenic not near genes chr3L 18507873 intergenic not near genes chr3L 18509610 intergenic not near genes chr3L_5_18505001 chr3L_18505001 RAL-304_75b 558 chr3L 18514906 18514908 chr3L 18520097 18520097 BS 4 5190 2.0 0.5 1.2 1.8 5191 chr3L 18514906 intergenic not near genes chr3L 18517502 intergenic not near genes chr3L 18520097 intergenic not near genes chr3L_4_18515001 chr3L_18515001 RAL-304_75b 559 chr3L 18528640 18528657 chr3L 18537799 18537818 roo 5 9160 0.0 2.5 1.2 2.3 9178 chr3L 18528640 intergenic not near genes chr3L 18533229 intergenic not near genes chr3L 18537818 intergenic not near genes chr3L_5_18530001 chr3L_18530001 RAL-304_75b 560 chr3L 18571752 18571783 chr3L 18572077 18572108 9 325 0.0 0.0 0.0 9.0 356 chr3L 18571752 intron AstC-R1 + chr3L 18571930 intron AstC-R1 + chr3L 18572108 intron AstC-R1 + chr3L_9_18570001 chr3L_18570001 RAL-304_75b 561 chr3L 18721774 18721804 chr3L 18721864 18721895 4 91 0.0 0.5 0.2 3.3 121 chr3L 18721774 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721895 3` UTR CG12477 - chr3L_4_18720001 chr3L_18720001 RAL-304_75b 562 chr3L 18833777 18833811 chr3L 18834941 18834975 1360 5 1164 2.0 1.0 1.5 2.0 1198 chr3L 18833777 intron Indy - chr3L 18834376 intron Indy - chr3L 18834975 intron Indy - chr3L_5_18830001 chr3L_18830001 RAL-304_75b 563 chr3L 1792249 1792277 chr3L 18966743 18966764 6 17174489 14.0 2.5 8.2 0.7 17174515 chr3L 1792249 intron,exon alpha-Spec -,dlt - chr3L 10379506 intergenic not near genes chr3L 18966764 intergenic not near genes chr3L_6_10375001 chr3L_10375001 RAL-304_75b 564 chr3L 19029451 19029457 chr3L 19029551 19029559 5 102 1.5 0.0 0.8 2.8 108 chr3L 19029451 intron nkd - chr3L 19029505 intron nkd - chr3L 19029559 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-304_75b 565 chr3L 19115639 19115669 chr3L 19115819 19115849 BS 5 180 0.5 1.0 0.8 2.8 210 chr3L 19115639 intron CG14082 - chr3L 19115744 intron CG14082 - chr3L 19115849 intron CG14082 - chr3L_5_19115001 chr3L_19115001 RAL-304_75b 566 chr3L 19130894 19130898 chr3L 19131003 19131008 4 110 0.5 0.0 0.2 3.3 114 chr3L 19130894 intron CG14082 - chr3L 19130951 intron CG14082 - chr3L 19131008 intron CG14082 - chr3L_4_19130001 chr3L_19130001 RAL-304_75b 567 chr3L 19182391 19182406 chr3L 19182472 19182487 4 81 2.5 3.0 2.8 1.1 96 chr3L 19182391 intron fz2 - chr3L 19182439 intron fz2 - chr3L 19182487 intron fz2 - chr3L_4_19180001 chr3L_19180001 RAL-304_75b 568 chr3L 19262218 19262244 chr3L 19262300 19262326 4 82 0.0 2.0 1.0 2.0 108 chr3L 19262218 3` UTR Bet1 + chr3L 19262272 3` UTR,3` UTR Bet1 +,Max - chr3L 19262326 3` UTR,3` UTR Bet1 +,Max - chr3L_4_19260001 chr3L_19260001 RAL-304_75b 569 chr3L 19279675 19279692 chr3L 19279767 19279784 5 92 4.5 0.5 2.5 1.4 109 chr3L 19279675 intron CG14086 + chr3L 19279730 exon CG14086 + chr3L 19279784 exon CG14086 + chr3L_5_19275001 chr3L_19275001 RAL-304_75b 570 chr3L 19404978 19405008 chr3L 19405055 19405083 10 76 0.0 0.5 0.2 8.3 105 chr3L 19404978 intron CG32206 - chr3L 19405030 intron CG32206 - chr3L 19405083 intron CG32206 - chr3L_10_19405001 chr3L_19405001 RAL-304_75b 571 chr3L 19493906 19493926 chr3L 19494260 19494284 5 357 0.5 0.0 0.2 4.2 378 chr3L 19493906 intron CG9449 - chr3L 19494095 intron CG9449 - chr3L 19494284 intron CG9449 - chr3L_5_19490001 chr3L_19490001 RAL-304_75b 572 chr3L 19848506 19848533 chr3L 19857695 19857720 roo 5 9189 2.0 3.0 2.5 1.4 9214 chr3L 19848506 intron Papss + chr3L 19853113 intron Papss + chr3L 19857720 intron Papss + chr3L_5_19850001 chr3L_19850001 RAL-304_75b 573 chr3L 20086786 20086820 chr3L 20086864 20086898 7 78 0.0 0.0 0.0 7.0 112 chr3L 20086786 intron sNPF-R - chr3L 20086842 intron sNPF-R - chr3L 20086898 intron sNPF-R - chr3L_7_20085001 chr3L_20085001 RAL-304_75b 574 chr3L 20184589 20184600 chr3L 20184675 20184686 6 86 0.0 2.5 1.2 2.7 97 chr3L 20184589 intron CG42674 - chr3L 20184638 intron CG42674 - chr3L 20184686 intron CG42674 - chr3L_6_20180001 chr3L_20180001 RAL-304_75b 575 chr3L 20658005 20658024 chr3L 20658139 20658156 7 134 1.5 1.0 1.2 3.2 151 chr3L 20658005 intergenic not near genes chr3L 20658080 intergenic not near genes chr3L 20658156 intergenic not near genes chr3L_7_20655001 chr3L_20655001 RAL-304_75b 576 chr3L 20762788 20762812 chr3L 20762875 20762899 7 87 2.0 0.5 1.2 3.2 111 chr3L 20762788 intergenic not near genes chr3L 20762844 intergenic not near genes chr3L 20762899 intergenic not near genes chr3L_7_20760001 chr3L_20760001 RAL-304_75b 577 chr3L 20821288 20821302 chr3L 20824898 20824913 NOF 6 3611 0.0 1.0 0.5 4.0 3625 chr3L 20821288 intron Pka-R1 + chr3L 20823100 intron Pka-R1 + chr3L 20824913 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 RAL-304_75b 578 chr3L 20849270 20849286 chr3L 20849349 20849365 5 79 1.0 1.5 1.2 2.3 95 chr3L 20849270 intron CG32432 - chr3L 20849318 intron CG32432 - chr3L 20849365 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-304_75b 579 chr3L 20964620 20964646 chr3L 20964697 20964722 7 77 1.5 0.0 0.8 3.9 102 chr3L 20964620 3` UTR CG12983 - chr3L 20964671 3` UTR CG12983 - chr3L 20964722 3` UTR CG12983 - chr3L_7_20960001 chr3L_20960001 RAL-304_75b 580 chr3L 21010382 21010398 chr3L 21010487 21010502 7 106 0.0 0.5 0.2 5.8 120 chr3L 21010382 intron skd - chr3L 21010442 intron skd - chr3L 21010502 intron skd - chr3L_7_21010001 chr3L_21010001 RAL-304_75b 581 chr3L 21014917 21014933 chr3L 21023397 21023414 Tirant 4 8480 1.5 1.0 1.2 1.8 8497 chr3L 21014917 intron skd - chr3L 21019166 intron skd - chr3L 21023414 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-304_75b 582 chr3L 21067968 21067978 chr3L 21068044 21068058 7 79 2.5 0.5 1.5 2.8 90 chr3L 21067968 intron siz + chr3L 21068013 intron siz + chr3L 21068058 intron siz + chr3L_7_21065001 chr3L_21065001 RAL-304_75b 583 chr3L 21094629 21094640 chr3L 21094713 21094723 6 84 1.0 0.0 0.5 4.0 94 chr3L 21094629 intron ko - chr3L 21094676 intron ko - chr3L 21094723 intron ko - chr3L_6_21090001 chr3L_21090001 RAL-304_75b 584 chr3L 21100215 21100227 chr3L 21100316 21100331 4 103 0.0 0.5 0.2 3.3 116 chr3L 21100215 intron ko - chr3L 21100273 intron ko - chr3L 21100331 intron ko - chr3L_4_21100001 chr3L_21100001 RAL-304_75b 585 chr3L 21243755 21243768 chr3L 21251315 21251331 412 6 7562 0.0 3.0 1.5 2.4 7576 chr3L 21243755 intron Eip78C + chr3L 21247543 intron Eip78C + chr3L 21251331 intron Eip78C + chr3L_6_21245001 chr3L_21245001 RAL-304_75b 586 chr3L 21319526 21319552 chr3L 21319616 21319638 8 89 3.0 2.5 2.8 2.1 112 chr3L 21319526 5` UTR Rab26 + chr3L 21319582 5` UTR Rab26 + chr3L 21319638 5` UTR Rab26 + chr3L_8_21315001 chr3L_21315001 RAL-304_75b 587 chr3L 21406999 21407012 chr3L 21407078 21407091 6 78 1.5 0.5 1.0 3.0 92 chr3L 21406999 intron rgn + chr3L 21407045 intron rgn + chr3L 21407091 intron rgn + chr3L_6_21405001 chr3L_21405001 RAL-304_75b 588 chr3L 21415139 21415141 chr3L 21415222 21415222 5 82 3.0 3.0 3.0 1.2 83 chr3L 21415139 intron rgn + chr3L 21415180 intron rgn + chr3L 21415222 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-304_75b 589 chr3L 21415539 21415555 chr3L 21415616 21415631 7 77 2.5 3.0 2.8 1.8 92 chr3L 21415539 intron rgn + chr3L 21415585 intron rgn + chr3L 21415631 intron rgn + chr3L_7_21415001 chr3L_21415001 RAL-304_75b 590 chr3L 4341331 4341332 chr3L 21448026 21448027 6 17106694 5.0 2.0 3.5 1.3 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-304_75b 591 chr3L 21458556 21458574 chr3L 21458671 21458689 7 114 2.0 0.5 1.2 3.2 133 chr3L 21458556 intergenic not near genes chr3L 21458622 intergenic not near genes chr3L 21458689 intergenic not near genes chr3L_7_21455001 chr3L_21455001 RAL-304_75b 592 chr3L 21657001 21657029 chr3L 21657094 21657121 12 92 1.0 0.5 0.8 6.7 120 chr3L 21657001 intron CG43980 + chr3L 21657061 intron CG43980 + chr3L 21657121 intron CG43980 + chr3L_12_21655001 chr3L_21655001 RAL-304_75b 593 chr3L 21692933 21692948 chr3L 21693104 21693119 5 171 1.0 1.5 1.2 2.3 186 chr3L 21692933 3` UTR CG32447 - chr3L 21693026 3` UTR CG32447 - chr3L 21693119 3` UTR CG32447 - chr3L_5_21690001 chr3L_21690001 RAL-304_75b 594 chr3L 21788648 21788667 chr3L 21788867 21788888 10 221 2.0 2.0 2.0 3.3 240 chr3L 21788648 intergenic not near genes chr3L 21788768 intergenic not near genes chr3L 21788888 intergenic not near genes chr3L_10_21785001 chr3L_21785001 RAL-304_75b 595 chr3L 22094277 22094285 chr3L 22094374 22094382 4 97 1.0 0.0 0.5 2.7 105 chr3L 22094277 intergenic not near genes chr3L 22094330 intergenic not near genes chr3L 22094382 intergenic not near genes chr3L_4_22090001 chr3L_22090001 RAL-304_75b 596 chr3L 22099673 22099702 chr3L 22105859 22105888 3S18 6 6186 3.0 0.0 1.5 2.4 6215 chr3L 22099673 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105888 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-304_75b 597 chr3L 22169471 22169484 chr3L 22169564 22169577 5 92 2.5 1.5 2.0 1.7 106 chr3L 22169471 intron olf413 + chr3L 22169524 intron olf413 + chr3L 22169577 intron olf413 + chr3L_5_22165001 chr3L_22165001 RAL-304_75b 598 chr3L 22179095 22179109 chr3L 22179179 22179195 9 85 0.0 4.0 2.0 3.0 100 chr3L 22179095 intron olf413 + chr3L 22179145 intron olf413 + chr3L 22179195 intron olf413 + chr3L_9_22175001 chr3L_22175001 RAL-304_75b 599 chr3L 22328066 22328088 chr3L 22328165 22328187 8 98 0.0 0.5 0.2 6.7 121 chr3L 22328066 intron Ten-m - chr3L 22328126 intron Ten-m - chr3L 22328187 intron Ten-m - chr3L_8_22325001 chr3L_22325001 RAL-304_75b 600 chr3L 22366733 22366740 chr3L 22366810 22366817 6 78 1.0 0.0 0.5 4.0 84 chr3L 22366733 intron Ten-m - chr3L 22366775 intron Ten-m - chr3L 22366817 intron Ten-m - chr3L_6_22365001 chr3L_22365001 RAL-304_75b 601 chr3L 22411397 22411399 chr3L 22411473 22411473 4 75 3.0 2.5 2.8 1.1 76 chr3L 22411397 intergenic not near genes chr3L 22411435 intergenic not near genes chr3L 22411473 intergenic not near genes chr3L_4_22410001 chr3L_22410001 RAL-304_75b 602 chr3L 22554422 22554423 chr3L 22554498 22554499 4 76 4.0 0.0 2.0 1.3 77 chr3L 22554422 intergenic not near genes chr3L 22554460 intergenic not near genes chr3L 22554499 intergenic not near genes chr3L_4_22550001 chr3L_22550001 RAL-304_75b 603 chr3L 22577619 22577644 chr3L 22582406 22582432 Doc 5 4787 3.0 0.5 1.8 1.8 4813 chr3L 22577619 intergenic not near genes chr3L 22580026 intergenic not near genes chr3L 22582432 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-304_75b 604 chr3L 22617192 22617220 chr3L 22624643 22624672 blood 16 7452 1.0 0.0 0.5 10.7 7480 chr3L 22617192 intron CG14459 - chr3L 22620932 intron CG14459 - chr3L 22624672 intron CG14459 - chr3L_16_22620001 chr3L_22620001 RAL-304_75b 605 chr3L 22761391 22761404 chr3L 22766825 22766838 Ivk 5 5434 1.5 4.0 2.8 1.3 5447 chr3L 22761391 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766838 intron SPoCk + chr3L_5_22760001 chr3L_22760001 RAL-304_75b 606 chr3L 11599623 11599623 chr3L 22785291 22785291 5 11185668 12.0 2.0 7.0 0.6 11185668 chr3L 11599623 intron CG7368 + chr3L 17192457 intron Rbp6 - chr3L 22785291 3` UTR SPoCk + chr3L_5_17190001 chr3L_17190001 RAL-304_75b 607 chr3L 22856630 22856631 chr3L 22856916 22856917 4 286 2.5 3.0 2.8 1.1 287 chr3L 22856630 intergenic not near genes chr3L 22856774 intergenic not near genes chr3L 22856917 intergenic not near genes chr3L_4_22855001 chr3L_22855001 RAL-304_75b 608 chr3L 22866000 22866013 chr3L 22867133 22867146 Doc 4 1132 0.0 1.5 0.8 2.2 1146 chr3L 22866000 intron CG33170 + chr3L 22866573 intron CG33170 + chr3L 22867146 intron CG33170 + chr3L_4_22865001 chr3L_22865001 RAL-304_75b 609 chr3L 22897211 22897213 chr3L 22897294 22897295 6 83 1.5 0.5 1.0 3.0 84 chr3L 22897211 intergenic not near genes chr3L 22897253 intergenic not near genes chr3L 22897295 intergenic not near genes chr3L_6_22895001 chr3L_22895001 RAL-304_75b 610 chr3L 22980574 22980596 chr3L 22980659 22980681 7 84 0.5 0.5 0.5 4.7 107 chr3L 22980574 intergenic not near genes chr3L 22980628 intergenic not near genes chr3L 22980681 intergenic not near genes chr3L_7_22980001 chr3L_22980001 RAL-304_75b 611 chr3L 22989866 22989892 chr3L 22996840 22996866 297 6 6974 0.0 0.5 0.2 5.0 7000 chr3L 22989866 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996866 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-304_75b 612 chr3L 22908066 22908066 chr3L 23657065 23657066 5 748999 9.0 4.0 6.5 0.7 749000 chr3L 22908066 intergenic not near genes chr3L 23282566 intron nAChRalpha4 + chr3L 23657066 intron AGO3 + chr3L_5_23280001 chr3L_23280001 RAL-304_75b 613 chr3L 23875527 23875532 chr3L 23875608 23875612 6 80 2.0 1.5 1.8 2.1 85 chr3L 23875527 intron CG40470 - chr3L 23875570 intron CG40470 - chr3L 23875612 intron CG40470 - chr3L_6_23875001 chr3L_23875001 RAL-304_75b 614 chr3L 24012406 24012433 chr3L 24020747 24020774 roo 6 8340 0.0 0.0 0.0 6.0 8368 chr3L 24012406 intergenic not near genes chr3L 24016590 intergenic not near genes chr3L 24020774 intergenic not near genes chr3L_6_24015001 chr3L_24015001 RAL-304_75b 615 chr3L 24168788 24168822 chr3L 24176114 24176150 ZAM 8 7328 0.0 0.0 0.0 8.0 7362 chr3L 24168788 intron Snap25 + chr3L 24172469 intron Snap25 + chr3L 24176150 intron Snap25 + chr3L_8_24170001 chr3L_24170001 RAL-304_75b 616 chr3L 24948622 24948622 chr3L 24948713 24948716 4 93 0.0 3.5 1.8 1.4 94 chr3L 24948622 intergenic not near genes chr3L 24948669 intergenic not near genes chr3L 24948716 intergenic not near genes chr3L_4_24945001 chr3L_24945001 RAL-304_75b 617 chr3R 4206084 4206103 chr3R 4211659 4211678 mdg3 6 5575 1.5 4.0 2.8 1.6 5594 chr3R 4206084 intron CG14636 - chr3R 4208881 intron CG14636 - chr3R 4211678 intron CG14636 - chr3R_6_4205001 chr3R_4205001 RAL-304_75b 618 chr3R 4408406 4408446 chr3R 4412711 4412750 Juan 5 4304 0.5 1.5 1.0 2.5 4344 chr3R 4408406 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412750 intron CG32944 - chr3R_5_4410001 chr3R_4410001 RAL-304_75b 619 chr3R 4658019 4658025 chr3R 4658436 4658442 4 417 2.0 2.0 2.0 1.3 423 chr3R 4658019 intergenic spartin + chr3R 4658230 intergenic spartin + chr3R 4658442 intergenic spartin + chr3R_4_4655001 chr3R_4655001 RAL-304_75b 620 chr3R 4769182 4769191 chr3R 4769258 4769269 5 77 0.5 2.5 1.5 2.0 87 chr3R 4769182 intron,intron atms +,CG44098 - chr3R 4769226 intron,intron atms +,CG44098 - chr3R 4769269 intron,intron atms +,CG44098 - chr3R_5_4765001 chr3R_4765001 RAL-304_75b 621 chr3R 4887491 4887511 chr3R 4894864 4894883 rover 7 7376 1.5 3.5 2.5 2.0 7392 chr3R 4887491 intergenic not near genes chr3R 4891187 intergenic not near genes chr3R 4894883 intergenic not near genes chr3R_7_4890001 chr3R_4890001 RAL-304_75b 622 chr3R 5045843 5045862 chr3R 5052945 5052962 HMS-Beagle 7 7102 0.0 1.5 0.8 3.9 7119 chr3R 5045843 intron CR43635 - chr3R 5049402 intergenic not near genes chr3R 5052962 intergenic CR45588 - chr3R_7_5045001 chr3R_5045001 RAL-304_75b 623 chr3R 5198969 5198990 chr3R 5199053 5199074 10 84 2.0 0.0 1.0 5.0 105 chr3R 5198969 intron cno - chr3R 5199022 intron cno - chr3R 5199074 intron cno - chr3R_10_5195001 chr3R_5195001 RAL-304_75b 624 chr3R 5437978 5437986 chr3R 5438088 5438096 11 110 0.5 0.5 0.5 7.3 118 chr3R 5437978 intron CG14669 + chr3R 5438037 intron CG14669 + chr3R 5438096 intron CG14669 + chr3R_11_5435001 chr3R_5435001 RAL-304_75b 625 chr3R 5445961 5445983 chr3R 5452421 5452441 Burdock 4 6459 3.0 1.0 2.0 1.3 6480 chr3R 5445961 intron CG14669 + chr3R 5449201 intron CG14669 + chr3R 5452441 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-304_75b 626 chr3R 5476623 5476625 chr3R 5784271 5784271 4 307647 4.0 10.5 7.2 0.5 307648 chr3R 5476623 exon Hcs + chr3R 5630447 exon CG31551 + chr3R 5784271 intron kat-60L1 + chr3R_4_5630001 chr3R_5630001 RAL-304_75b 627 chr3R 5497043 5497069 chr3R 5497912 5497938 7 869 15.5 20.0 17.8 0.4 895 chr3R 5497043 intron CG31547 - chr3R 5497490 intron CG31547 - chr3R 5497938 intron CG31547 - chr3R_7_5495001 chr3R_5495001 RAL-304_75b 628 chr3R 5726093 5726121 chr3R 5726254 5726283 5 162 0.5 3.5 2.0 1.7 190 chr3R 5726093 intergenic not near genes chr3R 5726188 intergenic not near genes chr3R 5726283 intergenic not near genes chr3R_5_5725001 chr3R_5725001 RAL-304_75b 629 chr3R 5746014 5746034 chr3R 5746255 5746274 pogo 4 241 1.0 1.0 1.0 2.0 260 chr3R 5746014 3` UTR Madm + chr3R 5746144 3` UTR Madm + chr3R 5746274 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-304_75b 630 chr3R 5772375 5772390 chr3R 5772533 5772548 4 158 8.0 3.0 5.5 0.6 173 chr3R 5772375 intron CG2082 - chr3R 5772462 intron CG2082 - chr3R 5772548 intron CG2082 - chr3R_4_5770001 chr3R_5770001 RAL-304_75b 631 chr3R 5809135 5809145 chr3R 5809376 5809386 pogo 6 240 2.5 3.0 2.8 1.6 251 chr3R 5809135 3` UTR CG11000 + chr3R 5809260 3` UTR CG11000 + chr3R 5809386 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-304_75b 632 chr3R 5822376 5822407 chr3R 5823542 5823574 1360 8 1166 1.5 2.0 1.8 2.9 1198 chr3R 5822376 3` UTR CG2023 - chr3R 5822975 3` UTR CG2023 - chr3R 5823574 3` UTR CG2023 - chr3R_8_5820001 chr3R_5820001 RAL-304_75b 633 chr3R 6015172 6015173 chr3R 30253972 30253972 4 24238800 3.5 6.0 4.8 0.7 24238800 chr3R 6015172 intergenic not near genes chr3R 18134572 intergenic not near genes chr3R 30253972 intron CG18404 + chr3R_4_18130001 chr3R_18130001 RAL-304_75b 634 chr3R 6061171 6061191 chr3R 6061287 6061305 8 116 7.0 2.0 4.5 1.5 134 chr3R 6061171 intergenic not near genes chr3R 6061238 intergenic not near genes chr3R 6061305 intergenic not near genes chr3R_8_6060001 chr3R_6060001 RAL-304_75b 635 chr3R 6060859 6060884 chr3R 6061236 6061261 5 377 7.5 4.5 6.0 0.7 402 chr3R 6060859 intergenic not near genes chr3R 6061060 intergenic not near genes chr3R 6061261 intergenic not near genes chr3R_5_6060001 chr3R_6060001 RAL-304_75b 636 chr3R 6158508 6158533 chr3R 6167091 6167116 Tirant 7 8582 0.0 0.0 0.0 7.0 8608 chr3R 6158508 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167116 intergenic CG1077 + chr3R_7_6160001 chr3R_6160001 RAL-304_75b 637 chr3R 6171153 6171175 chr3R 6171515 6171534 6 361 2.5 0.5 1.5 2.4 381 chr3R 6171153 intergenic not near genes chr3R 6171344 intergenic not near genes chr3R 6171534 intergenic not near genes chr3R_6_6170001 chr3R_6170001 RAL-304_75b 638 chr3R 6226627 6226635 chr3R 6226715 6226723 7 87 2.5 0.0 1.2 3.2 96 chr3R 6226627 intergenic not near genes chr3R 6226675 intergenic not near genes chr3R 6226723 intergenic not near genes chr3R_7_6225001 chr3R_6225001 RAL-304_75b 639 chr3R 6550328 6550345 chr3R 6550409 6550426 6 81 0.0 1.0 0.5 4.0 98 chr3R 6550328 intron dpr11 - chr3R 6550377 intron dpr11 - chr3R 6550426 intron dpr11 - chr3R_6_6550001 chr3R_6550001 RAL-304_75b 640 chr3R 6551128 6551138 chr3R 6551222 6551232 4 93 1.0 3.5 2.2 1.2 104 chr3R 6551128 intron dpr11 - chr3R 6551180 intron dpr11 - chr3R 6551232 intron dpr11 - chr3R_4_6550001 chr3R_6550001 RAL-304_75b 641 chr3R 6561953 6561982 chr3R 6562037 6562065 14 84 0.0 2.0 1.0 7.0 112 chr3R 6561953 intron dpr11 - chr3R 6562009 intron dpr11 - chr3R 6562065 intron dpr11 - chr3R_14_6560001 chr3R_6560001 RAL-304_75b 642 chr3R 6773558 6773582 chr3R 6773647 6773670 7 88 2.5 0.5 1.5 2.8 112 chr3R 6773558 intron CR42721 + chr3R 6773614 intron CR42721 + chr3R 6773670 intron CR42721 + chr3R_7_6770001 chr3R_6770001 RAL-304_75b 643 chr3R 6780452 6780467 chr3R 6780535 6780549 6 82 1.5 0.5 1.0 3.0 97 chr3R 6780452 intergenic not near genes chr3R 6780500 intergenic not near genes chr3R 6780549 intergenic not near genes chr3R_6_6780001 chr3R_6780001 RAL-304_75b 644 chr3R 6923584 6923590 chr3R 6923669 6923677 4 86 3.5 0.5 2.0 1.3 93 chr3R 6923584 intron Antp - chr3R 6923630 intron Antp - chr3R 6923677 intron Antp - chr3R_4_6920001 chr3R_6920001 RAL-304_75b 645 chr3R 7012202 7012227 chr3R 7012280 7012303 9 77 2.0 0.0 1.0 4.5 101 chr3R 7012202 intergenic not near genes chr3R 7012252 intergenic not near genes chr3R 7012303 intergenic not near genes chr3R_9_7010001 chr3R_7010001 RAL-304_75b 646 chr3R 7094504 7094504 chr3R 19026601 19026601 4 11932097 5.5 1.5 3.5 0.9 11932097 chr3R 7094504 exon e(y)2b + chr3R 13060552 intron sim + chr3R 19026601 exon gatA - chr3R_4_13060001 chr3R_13060001 RAL-304_75b 647 chr3R 7095981 7095982 chr3R 7096066 7096067 4 85 2.0 0.0 1.0 2.0 86 chr3R 7095981 intergenic not near genes chr3R 7096024 intergenic not near genes chr3R 7096067 intergenic not near genes chr3R_4_7095001 chr3R_7095001 RAL-304_75b 648 chr3R 7676974 7676980 chr3R 7677119 7677125 5 145 9.5 2.5 6.0 0.7 151 chr3R 7676974 intron Nlg1 + chr3R 7677050 intron Nlg1 + chr3R 7677125 intron Nlg1 + chr3R_5_7675001 chr3R_7675001 RAL-304_75b 649 chr3R 7726165 7726177 chr3R 7726242 7726252 5 76 1.5 0.0 0.8 2.8 87 chr3R 7726165 intergenic not near genes chr3R 7726208 intergenic not near genes chr3R 7726252 intergenic not near genes chr3R_5_7725001 chr3R_7725001 RAL-304_75b 650 chr3R 7884672 7884697 chr3R 7884750 7884775 4 77 1.5 0.0 0.8 2.2 103 chr3R 7884672 intron CG17816 - chr3R 7884724 intron CG17816 - chr3R 7884775 intron CG17816 - chr3R_4_7880001 chr3R_7880001 RAL-304_75b 651 chr3R 7948445 7948469 chr3R 7948522 7948546 10 77 1.5 0.5 1.0 5.0 101 chr3R 7948445 intron dsx - chr3R 7948496 intron dsx - chr3R 7948546 intron dsx - chr3R_10_7945001 chr3R_7945001 RAL-304_75b 652 chr3R 8094414 8094431 chr3R 8099719 8099732 Transpac 10 5304 0.0 0.5 0.2 8.3 5318 chr3R 8094414 intron CG7900 + chr3R 8097073 intron CG7900 + chr3R 8099732 intron CG7900 + chr3R_10_8095001 chr3R_8095001 RAL-304_75b 653 chr3R 8107388 8107411 chr3R 8107522 8107545 5 134 0.5 0.0 0.2 4.2 157 chr3R 8107388 intron puc + chr3R 8107466 intron puc + chr3R 8107545 intron puc + chr3R_5_8105001 chr3R_8105001 RAL-304_75b 654 chr3R 8207558 8207578 chr3R 8208403 8208422 F-element 9 844 0.5 1.0 0.8 5.0 864 chr3R 8207558 intergenic not near genes chr3R 8207990 intergenic not near genes chr3R 8208422 intergenic not near genes chr3R_9_8205001 chr3R_8205001 RAL-304_75b 655 chr3R 8339246 8339247 chr3R 21907534 21907536 11 13568289 14.5 3.0 8.8 1.1 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 RAL-304_75b 656 chr3R 8601779 8601798 chr3R 8610931 8610951 roo 5 9153 1.0 0.5 0.8 2.8 9172 chr3R 8601779 intron 5-HT2B + chr3R 8606365 intron 5-HT2B + chr3R 8610951 intron 5-HT2B + chr3R_5_8605001 chr3R_8605001 RAL-304_75b 657 chr3R 8707360 8707380 chr3R 8709801 8709821 jockey 5 2441 2.5 3.5 3.0 1.2 2461 chr3R 8707360 intergenic not near genes chr3R 8708590 intergenic not near genes chr3R 8709821 intergenic not near genes chr3R_5_8705001 chr3R_8705001 RAL-304_75b 658 chr3R 8917893 8917899 chr3R 8917973 8917979 4 80 3.5 4.5 4.0 0.8 86 chr3R 8917893 intron pyd - chr3R 8917936 intron pyd - chr3R 8917979 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-304_75b 659 chr3R 9036372 9036392 chr3R 9036450 9036470 5 78 1.5 0.0 0.8 2.8 98 chr3R 9036372 intron neur - chr3R 9036421 intron neur - chr3R 9036470 intron neur - chr3R_5_9035001 chr3R_9035001 RAL-304_75b 660 chr3R 9082047 9082050 chr3R 9082141 9082144 5 94 1.5 0.0 0.8 2.8 97 chr3R 9082047 intron pum - chr3R 9082096 intron pum - chr3R 9082144 intron pum - chr3R_5_9080001 chr3R_9080001 RAL-304_75b 661 chr3R 9104483 9104495 chr3R 9104573 9104584 8 89 0.0 4.0 2.0 2.7 101 chr3R 9104483 intron pum - chr3R 9104534 intron pum - chr3R 9104584 intron pum - chr3R_8_9100001 chr3R_9100001 RAL-304_75b 662 chr3R 9277564 9277569 chr3R 9277679 9277680 4 114 3.0 3.0 3.0 1.0 116 chr3R 9277564 intergenic not near genes chr3R 9277622 intergenic not near genes chr3R 9277680 intergenic not near genes chr3R_4_9275001 chr3R_9275001 RAL-304_75b 663 chr3R 9278791 9278808 chr3R 9284051 9284068 Rt1a 4 5260 0.0 2.5 1.2 1.8 5277 chr3R 9278791 intergenic not near genes chr3R 9281430 intergenic not near genes chr3R 9284068 intergenic not near genes chr3R_4_9280001 chr3R_9280001 RAL-304_75b 664 chr3R 9319573 9319590 chr3R 9320008 9320025 jockey 13 434 2.0 4.0 3.0 3.2 452 chr3R 9319573 intron CG8861 - chr3R 9319799 intron CG8861 - chr3R 9320025 intron CG8861 - chr3R_13_9315001 chr3R_9315001 RAL-304_75b 665 chr3R 9382823 9382833 chr3R 9382946 9382958 6 125 2.0 0.0 1.0 3.0 135 chr3R 9382823 intron FER - chr3R 9382890 intron FER - chr3R 9382958 intron FER - chr3R_6_9380001 chr3R_9380001 RAL-304_75b 666 chr3R 9702273 9702288 chr3R 9702349 9702364 5 76 1.5 4.0 2.8 1.3 91 chr3R 9702273 intron Unc-115a - chr3R 9702318 intron Unc-115a - chr3R 9702364 intron Unc-115a - chr3R_5_9700001 chr3R_9700001 RAL-304_75b 667 chr3R 9853179 9853195 chr3R 9853288 9853304 7 109 1.5 0.0 0.8 3.9 125 chr3R 9853179 intron Teh1 - chr3R 9853242 intron Teh1 - chr3R 9853304 intron Teh1 - chr3R_7_9850001 chr3R_9850001 RAL-304_75b 668 chr3R 9898789 9898816 chr3R 9898881 9898908 4 92 2.0 1.5 1.8 1.4 119 chr3R 9898789 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898908 intron Glut4EF + chr3R_4_9895001 chr3R_9895001 RAL-304_75b 669 chr3R 10512741 10512761 chr3R 10512835 10512855 5 93 0.5 2.0 1.2 2.3 114 chr3R 10512741 intron hth - chr3R 10512798 intron hth - chr3R 10512855 intron hth - chr3R_5_10510001 chr3R_10510001 RAL-304_75b 670 chr3R 10535335 10535335 chr3R 10535427 10535428 4 92 0.5 1.0 0.8 2.2 93 chr3R 10535335 intron hth - chr3R 10535382 intron hth - chr3R 10535428 intron hth - chr3R_4_10535001 chr3R_10535001 RAL-304_75b 671 chr3R 10593460 10593462 chr3R 10593544 10593546 4 84 0.0 2.0 1.0 2.0 86 chr3R 10593460 intron hth - chr3R 10593503 intron hth - chr3R 10593546 intron hth - chr3R_4_10590001 chr3R_10590001 RAL-304_75b 672 chr3R 11024183 11024198 chr3R 11024276 11024294 7 95 2.0 0.0 1.0 3.5 111 chr3R 11024183 intron CG34114 + chr3R 11024238 intron CG34114 + chr3R 11024294 intron CG34114 + chr3R_7_11020001 chr3R_11020001 RAL-304_75b 673 chr3R 11155063 11155065 chr3R 11155141 11155143 4 78 3.5 2.5 3.0 1.0 80 chr3R 11155063 intron Ugt86Dc + chr3R 11155103 intron Ugt86Dc + chr3R 11155143 intron Ugt86Dc + chr3R_4_11155001 chr3R_11155001 RAL-304_75b 674 chr3R 11197983 11197988 chr3R 11198082 11198087 5 98 2.5 0.0 1.2 2.3 104 chr3R 11197983 intron cu + chr3R 11198035 intron cu + chr3R 11198087 intron cu + chr3R_5_11195001 chr3R_11195001 RAL-304_75b 675 chr3R 11518814 11518842 chr3R 11518905 11518933 4 90 1.0 0.5 0.8 2.2 119 chr3R 11518814 intergenic not near genes chr3R 11518874 intergenic not near genes chr3R 11518933 intergenic not near genes chr3R_4_11515001 chr3R_11515001 RAL-304_75b 676 chr3R 11545891 11545902 chr3R 11546008 11546017 5 117 3.0 1.5 2.2 1.6 126 chr3R 11545891 intergenic not near genes chr3R 11545954 intergenic not near genes chr3R 11546017 intergenic not near genes chr3R_5_11545001 chr3R_11545001 RAL-304_75b 677 chr3R 11583956 11583979 chr3R 24045606 24045632 4 12461652 10.0 7.0 8.5 0.4 12461676 chr3R 11583956 exon wkd + chr3R 17814794 intron tinc + chr3R 24045632 exon Rox8 - chr3R_4_17810001 chr3R_17810001 RAL-304_75b 678 chr3R 11670986 11671008 chr3R 11671064 11671085 4 78 1.0 0.5 0.8 2.2 99 chr3R 11670986 intron CG42327 + chr3R 11671036 intron CG42327 + chr3R 11671085 intron CG42327 + chr3R_4_11670001 chr3R_11670001 RAL-304_75b 679 chr3R 11710212 11710232 chr3R 11710290 11710310 11 78 1.5 2.0 1.8 3.9 98 chr3R 11710212 intergenic not near genes chr3R 11710261 intergenic not near genes chr3R 11710310 intergenic not near genes chr3R_11_11710001 chr3R_11710001 RAL-304_75b 680 chr3R 11841075 11841088 chr3R 11846266 11846279 BS 4 5191 2.5 1.0 1.8 1.4 5204 chr3R 11841075 intron CG6959 - chr3R 11843677 intron CG6959 - chr3R 11846279 intron CG6959 - chr3R_4_11840001 chr3R_11840001 RAL-304_75b 681 chr3R 12080890 12080893 chr3R 12080968 12080968 5 77 1.0 3.5 2.2 1.6 78 chr3R 12080890 intron CG14741 - chr3R 12080929 intron CG14741 - chr3R 12080968 intron CG14741 - chr3R_5_12080001 chr3R_12080001 RAL-304_75b 682 chr3R 12111902 12111920 chr3R 12111978 12111996 9 75 0.0 1.0 0.5 6.0 94 chr3R 12111902 intergenic dpr17 + chr3R 12111949 intergenic not near genes chr3R 12111996 intergenic not near genes chr3R_9_12110001 chr3R_12110001 RAL-304_75b 683 chr3R 12119880 12119907 chr3R 12119979 12120006 5 99 3.0 1.0 2.0 1.7 126 chr3R 12119880 intergenic not near genes chr3R 12119943 intergenic not near genes chr3R 12120006 intergenic not near genes chr3R_5_12115001 chr3R_12115001 RAL-304_75b 684 chr3R 12175022 12175037 chr3R 12175387 12175402 4 365 1.0 0.5 0.8 2.2 380 chr3R 12175022 intergenic not near genes chr3R 12175212 intergenic not near genes chr3R 12175402 intergenic not near genes chr3R_4_12175001 chr3R_12175001 RAL-304_75b 685 chr3R 12247171 12247173 chr3R 12247255 12247257 5 85 0.0 3.5 1.8 1.8 86 chr3R 12247171 intergenic not near genes chr3R 12247214 intergenic not near genes chr3R 12247257 intergenic not near genes chr3R_5_12245001 chr3R_12245001 RAL-304_75b 686 chr3R 12267881 12267884 chr3R 12267958 12267961 7 78 3.5 2.0 2.8 1.8 80 chr3R 12267881 intron svp + chr3R 12267921 intron svp + chr3R 12267961 intron svp + chr3R_7_12265001 chr3R_12265001 RAL-304_75b 687 chr3R 12274680 12274702 chr3R 12274806 12274827 4 125 1.5 1.0 1.2 1.8 147 chr3R 12274680 intron svp + chr3R 12274754 intron svp + chr3R 12274827 intron svp + chr3R_4_12270001 chr3R_12270001 RAL-304_75b 688 chr3R 12348661 12348680 chr3R 12348765 12348785 6 105 0.5 1.5 1.0 3.0 124 chr3R 12348661 intergenic CG10038 - chr3R 12348723 intergenic CG10038 - chr3R 12348785 intergenic CG10038 - chr3R_6_12345001 chr3R_12345001 RAL-304_75b 689 chr3R 12516081 12516093 chr3R 12516176 12516188 6 95 1.5 1.5 1.5 2.4 107 chr3R 12516081 intron Octbeta3R - chr3R 12516134 intron Octbeta3R - chr3R 12516188 intron Octbeta3R - chr3R_6_12515001 chr3R_12515001 RAL-304_75b 690 chr3R 12546461 12546473 chr3R 12546544 12546556 5 83 2.0 1.5 1.8 1.8 95 chr3R 12546461 intron Octbeta3R - chr3R 12546508 intron Octbeta3R - chr3R 12546556 intron Octbeta3R - chr3R_5_12545001 chr3R_12545001 RAL-304_75b 691 chr3R 12628616 12628629 chr3R 12628699 12628709 12 82 3.0 2.0 2.5 3.4 93 chr3R 12628616 intron Snx3 + chr3R 12628662 intron Snx3 + chr3R 12628709 intron Snx3 + chr3R_12_12625001 chr3R_12625001 RAL-304_75b 692 chr3R 12704848 12704865 chr3R 12704924 12704944 11 79 3.5 0.0 1.8 3.9 96 chr3R 12704848 3` UTR Past1 + chr3R 12704896 intergenic Past1 +,CG12279 + chr3R 12704944 intergenic Past1 +,CG12279 + chr3R_11_12700001 chr3R_12700001 RAL-304_75b 693 chr3R 12836341 12836368 chr3R 12836418 12836444 5 77 0.0 0.0 0.0 5.0 103 chr3R 12836341 intergenic not near genes chr3R 12836392 intergenic not near genes chr3R 12836444 intergenic not near genes chr3R_5_12835001 chr3R_12835001 RAL-304_75b 694 chr3R 12854872 12854876 chr3R 19068094 19068094 4 6213221 2.0 2.5 2.2 1.2 6213222 chr3R 12854872 intergenic not near genes chr3R 15961483 3` UTR Sap47 + chr3R 19068094 intron cdi - chr3R_4_15960001 chr3R_15960001 RAL-304_75b 695 chr3R 13059962 13059976 chr3R 13060157 13060171 4 195 0.5 0.5 0.5 2.7 209 chr3R 13059962 intron sim + chr3R 13060066 intron sim + chr3R 13060171 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-304_75b 696 chr3R 13061884 13061901 chr3R 13061979 13061996 5 94 3.0 0.5 1.8 1.8 112 chr3R 13061884 intron sim + chr3R 13061940 intron sim + chr3R 13061996 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-304_75b 697 chr3R 13073982 13074002 chr3R 13074061 13074081 8 78 2.5 0.5 1.5 3.2 99 chr3R 13073982 intron sim + chr3R 13074032 intron sim + chr3R 13074081 exon sim + chr3R_8_13070001 chr3R_13070001 RAL-304_75b 698 chr3R 13349014 13349028 chr3R 13349090 13349102 6 76 1.5 0.5 1.0 3.0 88 chr3R 13349014 intergenic not near genes chr3R 13349058 intergenic not near genes chr3R 13349102 intergenic not near genes chr3R_6_13345001 chr3R_13345001 RAL-304_75b 699 chr3R 13533032 13533035 chr3R 13533285 13533288 4 252 5.0 2.0 3.5 0.9 256 chr3R 13533032 intergenic not near genes chr3R 13533160 intergenic not near genes chr3R 13533288 intergenic not near genes chr3R_4_13530001 chr3R_13530001 RAL-304_75b 700 chr3R 13552186 13552206 chr3R 13552286 13552306 4 98 4.0 2.5 3.2 1.0 120 chr3R 13552186 intergenic not near genes chr3R 13552246 intergenic not near genes chr3R 13552306 intergenic not near genes chr3R_4_13550001 chr3R_13550001 RAL-304_75b 701 chr3R 13603058 13603074 chr3R 13603149 13603165 7 91 0.0 1.0 0.5 4.7 107 chr3R 13603058 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603165 intergenic not near genes chr3R_7_13600001 chr3R_13600001 RAL-304_75b 702 chr3R 13672944 13672978 chr3R 13673022 13673056 9 78 1.0 3.0 2.0 3.0 112 chr3R 13672944 intron Task6 - chr3R 13673000 intron Task6 - chr3R 13673056 intron Task6 - chr3R_9_13670001 chr3R_13670001 RAL-304_75b 703 chr3R 13994320 13994332 chr3R 13994573 13994587 4 254 3.0 1.5 2.2 1.2 267 chr3R 13994320 intron rdx - chr3R 13994454 intron rdx - chr3R 13994587 intron rdx - chr3R_4_13990001 chr3R_13990001 RAL-304_75b 704 chr3R 14058145 14058150 chr3R 14058265 14058269 6 120 0.0 0.0 0.0 6.0 124 chr3R 14058145 intron foxo + chr3R 14058207 intron foxo + chr3R 14058269 intron foxo + chr3R_6_14055001 chr3R_14055001 RAL-304_75b 705 chr3R 14174971 14174984 chr3R 14175057 14175071 9 87 3.0 6.0 4.5 1.6 100 chr3R 14174971 3` UTR Dop1R1 - chr3R 14175021 3` UTR Dop1R1 - chr3R 14175071 3` UTR Dop1R1 - chr3R_9_14175001 chr3R_14175001 RAL-304_75b 706 chr3R 14180815 14180837 chr3R 14185580 14185602 F-element 4 4764 1.0 3.0 2.0 1.3 4787 chr3R 14180815 intron Dop1R1 - chr3R 14183208 intron Dop1R1 - chr3R 14185602 intron Dop1R1 - chr3R_4_14180001 chr3R_14180001 RAL-304_75b 707 chr3R 14249318 14249339 chr3R 14249400 14249422 5 82 0.5 1.5 1.0 2.5 104 chr3R 14249318 intergenic not near genes chr3R 14249370 intergenic not near genes chr3R 14249422 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-304_75b 708 chr3R 14294041 14294048 chr3R 14294119 14294126 4 78 0.0 3.0 1.5 1.6 85 chr3R 14294041 intron CG12207 + chr3R 14294084 intron CG12207 + chr3R 14294126 intron CG12207 + chr3R_4_14290001 chr3R_14290001 RAL-304_75b 709 chr3R 14842575 14842593 chr3R 14842659 14842677 4 84 0.5 6.0 3.2 1.0 102 chr3R 14842575 intron btsz - chr3R 14842626 intron btsz - chr3R 14842677 intron btsz - chr3R_4_14840001 chr3R_14840001 RAL-304_75b 710 chr3R 14878440 14878453 chr3R 14879274 14879290 8 836 3.0 2.0 2.5 2.3 850 chr3R 14878440 intergenic not near genes chr3R 14878865 intergenic not near genes chr3R 14879290 intergenic CG3631 + chr3R_8_14875001 chr3R_14875001 RAL-304_75b 711 chr3R 15132074 15132079 chr3R 15135134 15135139 Juan 5 3060 3.0 4.0 3.5 1.1 3065 chr3R 15132074 intergenic CG42788 - chr3R 15133606 intergenic not near genes chr3R 15135139 3` UTR CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-304_75b 712 chr3R 15156237 15156237 chr3R 15156384 15156384 4 147 0.5 0.0 0.2 3.3 147 chr3R 15156237 intron Gyc88E + chr3R 15156310 intron Gyc88E + chr3R 15156384 intron Gyc88E + chr3R_4_15155001 chr3R_15155001 RAL-304_75b 713 chr3R 15160566 15160577 chr3R 15160664 15160675 6 98 0.0 1.0 0.5 4.0 109 chr3R 15160566 intron Gyc88E + chr3R 15160620 intron Gyc88E + chr3R 15160675 intron Gyc88E + chr3R_6_15160001 chr3R_15160001 RAL-304_75b 714 chr3R 15162547 15162563 chr3R 15167314 15167330 F-element 8 4767 3.0 0.5 1.8 2.9 4783 chr3R 15162547 intron Gyc88E + chr3R 15164938 intron Gyc88E + chr3R 15167330 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-304_75b 715 chr3R 15169336 15169343 chr3R 15169525 15169530 8 188 10.0 7.0 8.5 0.8 194 chr3R 15169336 intron Gyc88E + chr3R 15169433 intron Gyc88E + chr3R 15169530 intron Gyc88E + chr3R_8_15165001 chr3R_15165001 RAL-304_75b 716 chr3R 15184535 15184570 chr3R 15184617 15184650 10 81 1.0 2.5 1.8 3.6 115 chr3R 15184535 intron Gyc88E + chr3R 15184592 intron Gyc88E + chr3R 15184650 intron Gyc88E + chr3R_10_15180001 chr3R_15180001 RAL-304_75b 717 chr3R 15601193 15601194 chr3R 15608712 15608714 412 5 7521 2.0 8.5 5.2 0.8 7521 chr3R 15601193 intergenic not near genes chr3R 15604954 intergenic not near genes chr3R 15608714 intergenic not near genes chr3R_5_15600001 chr3R_15600001 RAL-304_75b 718 chr3R 15662164 15662194 chr3R 15662257 15662287 5 93 3.5 0.0 1.8 1.8 123 chr3R 15662164 intergenic not near genes chr3R 15662226 intergenic not near genes chr3R 15662287 intergenic not near genes chr3R_5_15660001 chr3R_15660001 RAL-304_75b 719 chr3R 15691186 15691324 chr3R 15691290 15691407 8 90 0.0 0.0 0.0 8.0 221 chr3R 15691186 intergenic not near genes chr3R 15691296 intergenic not near genes chr3R 15691407 intergenic not near genes chr3R_8_15690001 chr3R_15690001 RAL-304_75b 720 chr3R 15734174 15734198 chr3R 15734263 15734289 4 90 1.0 1.0 1.0 2.0 115 chr3R 15734174 intergenic not near genes chr3R 15734232 intergenic not near genes chr3R 15734289 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-304_75b 721 chr3R 15783737 15783750 chr3R 15784017 15784024 5 279 0.0 2.5 1.2 2.3 287 chr3R 15783737 intergenic not near genes chr3R 15783880 intergenic not near genes chr3R 15784024 intergenic not near genes chr3R_5_15780001 chr3R_15780001 RAL-304_75b 722 chr3R 16023866 16023883 chr3R 16023943 16023960 6 77 2.0 2.0 2.0 2.0 94 chr3R 16023866 intergenic not near genes chr3R 16023913 intergenic not near genes chr3R 16023960 intergenic not near genes chr3R_6_16020001 chr3R_16020001 RAL-304_75b 723 chr3R 16246523 16246556 chr3R 16246599 16246632 8 76 0.0 1.5 0.8 4.4 109 chr3R 16246523 intron tara + chr3R 16246578 intron tara + chr3R 16246632 intron tara + chr3R_8_16245001 chr3R_16245001 RAL-304_75b 724 chr3R 16333749 16333785 chr3R 16333837 16333873 5 88 0.5 0.0 0.2 4.2 124 chr3R 16333749 intron Sulf1 - chr3R 16333811 intron Sulf1 - chr3R 16333873 intron Sulf1 - chr3R_5_16330001 chr3R_16330001 RAL-304_75b 725 chr3R 16508432 16508461 chr3R 16508534 16508560 5 101 0.0 0.0 0.0 5.0 128 chr3R 16508432 intron CG42342 + chr3R 16508496 intron CG42342 + chr3R 16508560 intron CG42342 + chr3R_5_16505001 chr3R_16505001 RAL-304_75b 726 chr3R 16683479 16683490 chr3R 16683571 16683582 4 92 0.0 1.0 0.5 2.7 103 chr3R 16683479 intron Ubx - chr3R 16683530 intron Ubx - chr3R 16683582 intron Ubx - chr3R_4_16680001 chr3R_16680001 RAL-304_75b 727 chr3R 16774195 16774231 chr3R 16774301 16774337 4 106 0.0 1.5 0.8 2.2 142 chr3R 16774195 intergenic not near genes chr3R 16774266 intergenic not near genes chr3R 16774337 intergenic not near genes chr3R_4_16770001 chr3R_16770001 RAL-304_75b 728 chr3R 17273988 17273991 chr3R 17274094 17274098 4 107 1.5 0.0 0.8 2.2 110 chr3R 17273988 intergenic not near genes chr3R 17274043 intergenic not near genes chr3R 17274098 intergenic not near genes chr3R_4_17270001 chr3R_17270001 RAL-304_75b 729 chr3R 17294664 17294685 chr3R 17295092 17295113 BS 6 428 1.0 1.0 1.0 3.0 449 chr3R 17294664 intergenic not near genes chr3R 17294888 intergenic not near genes chr3R 17295113 intergenic not near genes chr3R_6_17290001 chr3R_17290001 RAL-304_75b 730 chr3R 17346688 17346711 chr3R 17348251 17348273 F-element 6 1562 1.0 0.0 0.5 4.0 1585 chr3R 17346688 intron beat-IIa - chr3R 17347480 intron beat-IIa - chr3R 17348273 intron beat-IIa - chr3R_6_17345001 chr3R_17345001 RAL-304_75b 731 chr3R 17522212 17522229 chr3R 17522305 17522322 5 93 1.0 0.0 0.5 3.3 110 chr3R 17522212 intergenic not near genes chr3R 17522267 intergenic not near genes chr3R 17522322 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-304_75b 732 chr3R 17588430 17588453 chr3R 17588508 17588531 7 78 3.5 1.5 2.5 2.0 101 chr3R 17588430 intergenic not near genes chr3R 17588480 intergenic not near genes chr3R 17588531 intergenic not near genes chr3R_7_17585001 chr3R_17585001 RAL-304_75b 733 chr3R 17638318 17638319 chr3R 17638804 17638805 roo 5 486 0.0 0.5 0.2 4.2 487 chr3R 17638318 intron CG43175 + chr3R 17638562 intron CG43175 + chr3R 17638805 intron,5` UTR CG43175 +,CR45222 + chr3R_5_17635001 chr3R_17635001 RAL-304_75b 734 chr3R 17725081 17725087 chr3R 17725175 17725181 5 94 1.5 0.0 0.8 2.8 100 chr3R 17725081 intergenic Atg8b - chr3R 17725131 intergenic Atg8b - chr3R 17725181 intergenic Atg8b - chr3R_5_17725001 chr3R_17725001 RAL-304_75b 735 chr3R 17763164 17763167 chr3R 17763650 17763650 roo 4 485 3.0 0.5 1.8 1.4 486 chr3R 17763164 5` UTR TyrR - chr3R 17763407 intergenic TyrR - chr3R 17763650 intergenic TyrR - chr3R_4_17760001 chr3R_17760001 RAL-304_75b 736 chr3R 17811199 17811200 chr3R 17811279 17811280 5 80 2.5 0.0 1.2 2.3 81 chr3R 17811199 intergenic CG18012 -,tinc + chr3R 17811240 intergenic CG18012 -,tinc + chr3R 17811280 intergenic CG18012 -,tinc + chr3R_5_17810001 chr3R_17810001 RAL-304_75b 737 chr3R 18041753 18041770 chr3R 18041830 18041847 9 76 0.0 0.0 0.0 9.0 94 chr3R 18041753 intergenic not near genes chr3R 18041800 intergenic not near genes chr3R 18041847 intergenic not near genes chr3R_9_18040001 chr3R_18040001 RAL-304_75b 738 chr3R 18101385 18101385 chr3R 18101459 18101461 4 76 0.5 0.5 0.5 2.7 76 chr3R 18101385 intron sr + chr3R 18101423 intron sr + chr3R 18101461 intron sr + chr3R_4_18100001 chr3R_18100001 RAL-304_75b 739 chr3R 18316839 18316855 chr3R 18316921 18316940 7 84 2.0 0.0 1.0 3.5 101 chr3R 18316839 3` UTR CG31235 - chr3R 18316890 3` UTR CG31235 - chr3R 18316940 3` UTR CG31235 - chr3R_7_18315001 chr3R_18315001 RAL-304_75b 740 chr3R 18501598 18501608 chr3R 18501679 18501689 4 81 1.0 0.0 0.5 2.7 91 chr3R 18501598 intron fru - chr3R 18501644 intron fru - chr3R 18501689 intron fru - chr3R_4_18500001 chr3R_18500001 RAL-304_75b 741 chr3R 18615384 18615404 chr3R 18615476 18615495 8 92 1.0 2.5 1.8 2.9 111 chr3R 18615384 intron,intron qin +,CG14304 - chr3R 18615440 intron,intron qin +,CG14304 - chr3R 18615495 intron,intron qin +,CG14304 - chr3R_8_18615001 chr3R_18615001 RAL-304_75b 742 chr3R 18670380 18670406 chr3R 18670473 18670499 4 93 2.5 0.5 1.5 1.6 119 chr3R 18670380 intron CG7702 + chr3R 18670440 intron CG7702 + chr3R 18670499 intron CG7702 + chr3R_4_18670001 chr3R_18670001 RAL-304_75b 743 chr3R 18720321 18720336 chr3R 18720414 18720432 10 95 0.5 2.5 1.5 4.0 111 chr3R 18720321 intron Cha + chr3R 18720376 intron Cha + chr3R 18720432 intron Cha + chr3R_10_18720001 chr3R_18720001 RAL-304_75b 744 chr3R 18785868 18785903 chr3R 18785945 18785980 7 77 2.0 2.0 2.0 2.3 112 chr3R 18785868 intron CG7720 - chr3R 18785924 intron CG7720 - chr3R 18785980 intron CG7720 - chr3R_7_18785001 chr3R_18785001 RAL-304_75b 745 chr3R 18791501 18791517 chr3R 18791580 18791596 10 78 0.0 0.0 0.0 10.0 95 chr3R 18791501 intron CG7720 - chr3R 18791548 intron CG7720 - chr3R 18791596 intron CG7720 - chr3R_10_18790001 chr3R_18790001 RAL-304_75b 746 chr3R 18830072 18830085 chr3R 18830210 18830223 6 138 2.5 5.5 4.0 1.2 151 chr3R 18830072 intron CG18208 - chr3R 18830148 intron CG18208 - chr3R 18830223 intron CG18208 - chr3R_6_18830001 chr3R_18830001 RAL-304_75b 747 chr3R 19109221 19109244 chr3R 19109333 19109356 8 110 0.0 0.0 0.0 8.0 135 chr3R 19109221 intron CG6040 + chr3R 19109288 intron CG6040 + chr3R 19109356 intron CG6040 + chr3R_8_19105001 chr3R_19105001 RAL-304_75b 748 chr3R 19340407 19340420 chr3R 19340484 19340496 4 77 2.0 2.5 2.2 1.2 89 chr3R 19340407 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340496 intergenic not near genes chr3R_4_19340001 chr3R_19340001 RAL-304_75b 749 chr3R 19505939 19505958 chr3R 19506037 19506057 8 98 0.0 0.5 0.2 6.7 118 chr3R 19505939 intron Dys + chr3R 19505998 intron Dys + chr3R 19506057 intron Dys + chr3R_8_19505001 chr3R_19505001 RAL-304_75b 750 chr3R 19683519 19683543 chr3R 19683663 19683688 4 144 1.0 1.0 1.0 2.0 169 chr3R 19683519 intron Naam + chr3R 19683604 intron Naam + chr3R 19683688 intron Naam + chr3R_4_19680001 chr3R_19680001 RAL-304_75b 751 chr3R 19793894 19793924 chr3R 19793987 19794016 8 92 2.5 0.0 1.2 3.6 122 chr3R 19793894 intergenic bnl - chr3R 19793955 intergenic bnl - chr3R 19794016 intergenic bnl - chr3R_8_19790001 chr3R_19790001 RAL-304_75b 752 chr3R 19839543 19839555 chr3R 19839774 19839787 5 232 5.5 0.5 3.0 1.2 244 chr3R 19839543 intergenic not near genes chr3R 19839665 intergenic not near genes chr3R 19839787 intergenic not near genes chr3R_5_19835001 chr3R_19835001 RAL-304_75b 753 chr3R 19943884 19943897 chr3R 19943963 19943977 4 79 2.0 0.0 1.0 2.0 93 chr3R 19943884 intron Hs6st - chr3R 19943930 intron Hs6st - chr3R 19943977 intron Hs6st - chr3R_4_19940001 chr3R_19940001 RAL-304_75b 754 chr3R 20041121 20041142 chr3R 20041222 20041243 11 102 2.0 0.5 1.2 5.0 122 chr3R 20041121 intron CG17193 - chr3R 20041182 intron CG17193 - chr3R 20041243 intron CG17193 - chr3R_11_20040001 chr3R_20040001 RAL-304_75b 755 chr3R 20156703 20156706 chr3R 20165873 20165876 roo 5 9170 3.0 0.5 1.8 1.8 9173 chr3R 20156703 intergenic not near genes chr3R 20161290 intergenic not near genes chr3R 20165876 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-304_75b 756 chr3R 20231465 20231466 chr3R 20231645 20231645 4 180 9.5 3.5 6.5 0.5 180 chr3R 20231465 intron Nlg4 + chr3R 20231555 intron Nlg4 + chr3R 20231645 intron Nlg4 + chr3R_4_20230001 chr3R_20230001 RAL-304_75b 757 chr3R 20231463 20231470 chr3R 20231648 20231649 7 181 9.5 2.0 5.8 1.0 186 chr3R 20231463 intron Nlg4 + chr3R 20231556 intron Nlg4 + chr3R 20231649 intron Nlg4 + chr3R_7_20230001 chr3R_20230001 RAL-304_75b 758 chr3R 20266515 20266541 chr3R 20272986 20273012 Burdock 10 6471 0.0 2.0 1.0 5.0 6497 chr3R 20266515 intron cic + chr3R 20269764 intron cic + chr3R 20273012 intron cic + chr3R_10_20265001 chr3R_20265001 RAL-304_75b 759 chr3R 20331004 20331019 chr3R 20331488 20331505 roo 8 485 3.5 2.0 2.8 2.1 501 chr3R 20331004 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331505 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RAL-304_75b 760 chr3R 20512350 20512365 chr3R 20512433 20512446 10 81 0.5 0.5 0.5 6.7 96 chr3R 20512350 5` UTR CG4288 - chr3R 20512398 5` UTR CG4288 - chr3R 20512446 5` UTR CG4288 - chr3R_10_20510001 chr3R_20510001 RAL-304_75b 761 chr3R 20730930 20731058 chr3R 20731030 20731146 5 90 0.0 0.0 0.0 5.0 216 chr3R 20730930 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731146 intergenic CG31205 + chr3R_5_20730001 chr3R_20730001 RAL-304_75b 762 chr3R 20787453 20787453 chr3R 20787544 20787544 4 91 2.0 4.0 3.0 1.0 91 chr3R 20787453 intron Syp + chr3R 20787498 intron Syp + chr3R 20787544 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-304_75b 763 chr3R 20870251 20870277 chr3R 20870336 20870362 6 84 3.5 0.0 1.8 2.1 111 chr3R 20870251 intergenic not near genes chr3R 20870306 intergenic not near genes chr3R 20870362 intergenic not near genes chr3R_6_20870001 chr3R_20870001 RAL-304_75b 764 chr3R 21108042 21108063 chr3R 21108302 21108324 5 261 0.0 0.0 0.0 5.0 282 chr3R 21108042 intergenic Sec15 -,rtet + chr3R 21108183 intergenic Sec15 -,rtet + chr3R 21108324 intergenic rtet +,Sec15 - chr3R_5_21105001 chr3R_21105001 RAL-304_75b 765 chr3R 21154549 21154586 chr3R 21154753 21154801 4 212 0.5 0.0 0.2 3.3 252 chr3R 21154549 intron SNF4Agamma + chr3R 21154675 intron SNF4Agamma + chr3R 21154801 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 RAL-304_75b 766 chr3R 21214745 21214747 chr3R 21214917 21214919 4 172 0.0 3.0 1.5 1.6 174 chr3R 21214745 intergenic CG5862 + chr3R 21214832 intergenic CG5862 + chr3R 21214919 intergenic CG5862 + chr3R_4_21210001 chr3R_21210001 RAL-304_75b 767 chr3R 21239811 21239953 chr3R 21239905 21240028 7 78 0.0 0.0 0.0 7.0 217 chr3R 21239811 intergenic not near genes chr3R 21239920 intergenic not near genes chr3R 21240028 intergenic not near genes chr3R_7_21235001 chr3R_21235001 RAL-304_75b 768 chr3R 21759037 21759063 chr3R 21759140 21759166 11 103 1.5 3.0 2.2 3.4 129 chr3R 21759037 exon CG42335 + chr3R 21759102 exon CG42335 + chr3R 21759166 exon CG42335 + chr3R_11_21755001 chr3R_21755001 RAL-304_75b 769 chr3R 21907534 21907534 chr3R 28831801 28831805 5 6924268 2.5 7.5 5.0 0.8 6924271 chr3R 21907534 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831805 intron WASp - chr3R_5_25365001 chr3R_25365001 RAL-304_75b 770 chr3R 8339246 8339247 chr3R 21907535 21907535 5 13568288 14.5 3.5 9.0 0.5 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-304_75b 771 chr3R 21907535 21907535 chr3R 28831801 28831802 33 6924266 2.5 7.5 5.0 5.5 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_33_25365001 chr3R_25365001 RAL-304_75b 772 chr3R 21907536 21907536 chr3R 28831801 28831802 26 6924266 2.5 7.5 5.0 4.3 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_26_25365001 chr3R_25365001 RAL-304_75b 773 chr3R 22108368 22108381 chr3R 22108599 22108613 5 231 0.0 0.0 0.0 5.0 245 chr3R 22108368 intron CG5778 - chr3R 22108490 intron CG5778 - chr3R 22108613 intron CG5778 - chr3R_5_22105001 chr3R_22105001 RAL-304_75b 774 chr3R 22234695 22234714 chr3R 22236014 22236033 pogo 9 1319 0.0 3.5 1.8 3.2 1338 chr3R 22234695 intron SKIP + chr3R 22235364 intron SKIP + chr3R 22236033 intron SKIP + chr3R_9_22235001 chr3R_22235001 RAL-304_75b 775 chr3R 22428576 22428599 chr3R 22428652 22428675 7 76 0.5 2.0 1.2 3.2 99 chr3R 22428576 intron CG13847 - chr3R 22428626 intron CG13847 - chr3R 22428675 intron CG13847 - chr3R_7_22425001 chr3R_22425001 RAL-304_75b 776 chr3R 22499835 22499841 chr3R 22499911 22499917 6 76 0.0 2.5 1.2 2.7 82 chr3R 22499835 intron Octbeta1R + chr3R 22499876 intron Octbeta1R + chr3R 22499917 intron Octbeta1R + chr3R_6_22495001 chr3R_22495001 RAL-304_75b 777 chr3R 22769102 22769120 chr3R 22769179 22769197 5 77 3.5 1.0 2.2 1.6 95 chr3R 22769102 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769150 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769197 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_5_22765001 chr3R_22765001 RAL-304_75b 778 chr3R 22842387 22842408 chr3R 22842485 22842507 9 99 1.0 0.0 0.5 6.0 120 chr3R 22842387 intergenic not near genes chr3R 22842447 intergenic not near genes chr3R 22842507 intergenic not near genes chr3R_9_22840001 chr3R_22840001 RAL-304_75b 779 chr3R 22887388 22887414 chr3R 22887464 22887490 7 75 2.5 0.0 1.2 3.2 102 chr3R 22887388 intergenic not near genes chr3R 22887439 intergenic not near genes chr3R 22887490 intergenic not near genes chr3R_7_22885001 chr3R_22885001 RAL-304_75b 780 chr3R 23064180 23064196 chr3R 23064289 23064305 11 109 3.5 1.0 2.2 3.4 125 chr3R 23064180 exon CG17111 - chr3R 23064242 intron CG17111 - chr3R 23064305 exon CG17111 - chr3R_11_23060001 chr3R_23060001 RAL-304_75b 781 chr3R 23085575 23085595 chr3R 23085690 23085710 7 114 2.0 0.5 1.2 3.2 135 chr3R 23085575 intron CG13830 - chr3R 23085642 intron CG13830 - chr3R 23085710 intron CG13830 - chr3R_7_23085001 chr3R_23085001 RAL-304_75b 782 chr3R 23204545 23204562 chr3R 23204649 23204663 8 104 1.5 2.0 1.8 2.9 118 chr3R 23204545 intron cnc - chr3R 23204604 intron cnc - chr3R 23204663 intron cnc - chr3R_8_23200001 chr3R_23200001 RAL-304_75b 783 chr3R 23865046 23865059 chr3R 23865134 23865148 5 89 0.5 3.0 1.8 1.8 102 chr3R 23865046 intron Pli - chr3R 23865097 intron Pli - chr3R 23865148 intron Pli - chr3R_5_23865001 chr3R_23865001 RAL-304_75b 784 chr3R 23888090 23888112 chr3R 23888173 23888197 8 85 3.0 2.5 2.8 2.1 107 chr3R 23888090 intron Pli - chr3R 23888144 intron Pli - chr3R 23888197 intron Pli - chr3R_8_23885001 chr3R_23885001 RAL-304_75b 785 chr3R 23944915 23944932 chr3R 23945000 23945014 11 84 5.5 2.0 3.8 2.3 99 chr3R 23944915 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945014 intron CG12268 - chr3R_11_23940001 chr3R_23940001 RAL-304_75b 786 chr3R 24020829 24020829 chr3R 24021322 24021322 4 493 6.0 0.0 3.0 1.0 493 chr3R 24020829 intron KrT95D - chr3R 24021076 intron KrT95D - chr3R 24021322 intron KrT95D - chr3R_4_24020001 chr3R_24020001 RAL-304_75b 787 chr3R 24670185 24670199 chr3R 24670270 24670284 6 85 0.0 1.0 0.5 4.0 99 chr3R 24670185 intron slo + chr3R 24670234 intron slo + chr3R 24670284 intron slo + chr3R_6_24670001 chr3R_24670001 RAL-304_75b 788 chr3R 24789994 24789998 chr3R 24790139 24790143 4 145 1.5 1.0 1.2 1.8 149 chr3R 24789994 intron,5` UTR Ets96B +,CG13634 - chr3R 24790068 intron,5` UTR Ets96B +,CG13634 - chr3R 24790143 intron Ets96B + chr3R_4_24790001 chr3R_24790001 RAL-304_75b 789 chr3R 25203346 25203371 chr3R 25203474 25203501 7 129 1.0 3.0 2.0 2.3 155 chr3R 25203346 intron,intron Cad96Ca -,CG13654 + chr3R 25203424 intron,intron Cad96Ca -,CG13654 + chr3R 25203501 intron,intron Cad96Ca -,CG13654 + chr3R_7_25200001 chr3R_25200001 RAL-304_75b 790 chr3R 25368482 25368495 chr3R 25368600 25368612 5 118 1.0 0.0 0.5 3.3 130 chr3R 25368482 intron Fur1 - chr3R 25368547 intron Fur1 - chr3R 25368612 intron Fur1 - chr3R_5_25365001 chr3R_25365001 RAL-304_75b 791 chr3R 25612909 25612941 chr3R 25612986 25613016 8 76 1.0 2.0 1.5 3.2 107 chr3R 25612909 intron Npl4 - chr3R 25612962 intron Npl4 - chr3R 25613016 intron Npl4 - chr3R_8_25610001 chr3R_25610001 RAL-304_75b 792 chr3R 25725829 25725858 chr3R 25734989 25735016 roo 6 9160 0.5 0.5 0.5 4.0 9187 chr3R 25725829 intron LpR2 - chr3R 25730422 intron LpR2 - chr3R 25735016 intron LpR2 - chr3R_6_25730001 chr3R_25730001 RAL-304_75b 793 chr3R 25738633 25738638 chr3R 25738721 25738726 4 88 7.0 1.5 4.2 0.8 93 chr3R 25738633 intron LpR2 - chr3R 25738680 intron LpR2 - chr3R 25738726 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-304_75b 794 chr3R 25832699 25832710 chr3R 25841881 25841892 roo 6 9182 3.0 3.5 3.2 1.4 9193 chr3R 25832699 exon alpha4GT2 + chr3R 25837296 intron alpha4GT2 + chr3R 25841892 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-304_75b 795 chr3R 26108829 26108831 chr3R 26117412 26117413 Tirant 4 8583 0.0 0.0 0.0 4.0 8584 chr3R 26108829 5` UTR CG31324 + chr3R 26113121 intron CG31324 + chr3R 26117413 intron CG31324 + chr3R_4_26110001 chr3R_26110001 RAL-304_75b 796 chr3R 26126550 26126569 chr3R 26126636 26126655 5 86 2.0 1.5 1.8 1.8 105 chr3R 26126550 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126655 intron CG31324 + chr3R_5_26125001 chr3R_26125001 RAL-304_75b 797 chr3R 17227312 17227314 chr3R 26242104 26242106 4 9014792 5.0 6.5 5.8 0.6 9014794 chr3R 17227312 intergenic not near genes chr3R 21734709 intergenic not near genes chr3R 26242106 intron CR42745 + chr3R_4_21730001 chr3R_21730001 RAL-304_75b 798 chr3R 26247279 26247281 chr3R 26247415 26247417 7 136 1.0 5.5 3.2 1.7 138 chr3R 26247279 intron CR42745 + chr3R 26247348 intron CR42745 + chr3R 26247417 intron CR42745 + chr3R_7_26245001 chr3R_26245001 RAL-304_75b 799 chr3R 26292127 26292137 chr3R 26292207 26292217 6 80 2.5 1.0 1.8 2.1 90 chr3R 26292127 intergenic not near genes chr3R 26292172 intergenic not near genes chr3R 26292217 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-304_75b 800 chr3R 26376344 26376357 chr3R 26385502 26385517 roo 6 9160 0.0 4.5 2.2 1.9 9173 chr3R 26376344 intergenic not near genes chr3R 26380930 intergenic not near genes chr3R 26385517 intergenic not near genes chr3R_6_26380001 chr3R_26380001 RAL-304_75b 801 chr3R 26510526 26510528 chr3R 26519579 26519582 roo 7 9055 3.5 3.0 3.2 1.7 9056 chr3R 26510526 intron plum - chr3R 26515054 intron plum - chr3R 26519582 intron,5` UTR plum -,CR45226 + chr3R_7_26515001 chr3R_26515001 RAL-304_75b 802 chr3R 26656643 26656643 chr3R 26656740 26656741 4 98 1.5 0.0 0.8 2.2 98 chr3R 26656643 intron,exon beat-VII -,Tb + chr3R 26656692 intron,exon beat-VII -,Tb + chr3R 26656741 intron,exon beat-VII -,Tb + chr3R_4_26655001 chr3R_26655001 RAL-304_75b 803 chr3R 26674592 26674615 chr3R 26674678 26674702 7 87 0.5 0.0 0.2 5.8 110 chr3R 26674592 intron beat-VII - chr3R 26674647 intron beat-VII - chr3R 26674702 intron beat-VII - chr3R_7_26670001 chr3R_26670001 RAL-304_75b 804 chr3R 26735528 26735553 chr3R 26735621 26735645 4 92 0.0 0.5 0.2 3.3 117 chr3R 26735528 3` UTR CG6403 - chr3R 26735586 3` UTR CG6403 - chr3R 26735645 exon CG6403 - chr3R_4_26735001 chr3R_26735001 RAL-304_75b 805 chr3R 12206273 12206274 chr3R 27042065 27042065 4 14835791 3.5 10.5 7.0 0.5 14835792 chr3R 12206273 intergenic not near genes chr3R 19624169 intron CG6231 - chr3R 27042065 intron RYa-R + chr3R_4_19620001 chr3R_19620001 RAL-304_75b 806 chr3R 27051675 27051692 chr3R 27051765 27051783 5 91 1.5 0.0 0.8 2.8 108 chr3R 27051675 intron RYa-R + chr3R 27051729 intron RYa-R + chr3R 27051783 intron RYa-R + chr3R_5_27050001 chr3R_27050001 RAL-304_75b 807 chr3R 27077109 27077111 chr3R 27077189 27077189 4 79 1.0 1.0 1.0 2.0 80 chr3R 27077109 intron CG14257 + chr3R 27077149 intron CG14257 + chr3R 27077189 intron CG14257 + chr3R_4_27075001 chr3R_27075001 RAL-304_75b 808 chr3R 27140515 27140526 chr3R 27148123 27148133 412 5 7609 2.5 3.0 2.8 1.3 7618 chr3R 27140515 intron CG6051 - chr3R 27144324 intron CG6051 - chr3R 27148133 intron CG6051 - chr3R_5_27140001 chr3R_27140001 RAL-304_75b 809 chr3R 27315992 27316008 chr3R 27316068 27316084 6 76 2.0 1.5 1.8 2.1 92 chr3R 27315992 intron CG3339 - chr3R 27316038 intron CG3339 - chr3R 27316084 exon CG3339 - chr3R_6_27315001 chr3R_27315001 RAL-304_75b 810 chr3R 27342798 27342826 chr3R 27351379 27351407 Tirant 12 8580 0.5 0.5 0.5 8.0 8609 chr3R 27342798 intron CG42534 + chr3R 27347102 intron CG42534 + chr3R 27351407 intron CG42534 + chr3R_12_27345001 chr3R_27345001 RAL-304_75b 811 chr3R 27517437 27517452 chr3R 27517542 27517557 4 105 2.0 4.5 3.2 1.0 120 chr3R 27517437 intergenic CG13972 - chr3R 27517497 intergenic CG13972 - chr3R 27517557 intergenic CG13972 - chr3R_4_27515001 chr3R_27515001 RAL-304_75b 812 chr3R 27535790 27535795 chr3R 27535888 27535893 5 97 1.0 1.0 1.0 2.5 103 chr3R 27535790 intergenic CR44289 - chr3R 27535842 3` UTR CR44289 - chr3R 27535893 3` UTR CR44289 - chr3R_5_27535001 chr3R_27535001 RAL-304_75b 813 chr3R 27648599 27648866 chr3R 27648681 27648943 11 77 0.5 0.0 0.2 9.2 344 chr3R 27648599 intron tau - chr3R 27648771 intron tau - chr3R 27648943 intron tau - chr3R_11_27645001 chr3R_27645001 RAL-304_75b 814 chr3R 27799940 27799964 chr3R 27800022 27800045 6 82 0.0 0.5 0.2 5.0 105 chr3R 27799940 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800045 intron CG34353 - chr3R_6_27795001 chr3R_27795001 RAL-304_75b 815 chr3R 27841120 27841136 chr3R 27841199 27841217 9 80 0.0 5.5 2.8 2.4 97 chr3R 27841120 intron CG34353 - chr3R 27841168 intron CG34353 - chr3R 27841217 intron CG34353 - chr3R_9_27840001 chr3R_27840001 RAL-304_75b 816 chr3R 27875705 27875729 chr3R 27882760 27882784 297 7 7055 8.0 0.5 4.2 1.3 7079 chr3R 27875705 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882784 intron CG34353 - chr3R_7_27875001 chr3R_27875001 RAL-304_75b 817 chr3R 28137693 28137720 chr3R 28137771 28137800 4 79 1.0 2.5 1.8 1.4 107 chr3R 28137693 intergenic not near genes chr3R 28137746 intergenic not near genes chr3R 28137800 intergenic not near genes chr3R_4_28135001 chr3R_28135001 RAL-304_75b 818 chr3R 28173702 28173704 chr3R 28181132 28181133 mdg1 7 7430 3.0 4.5 3.8 1.5 7431 chr3R 28173702 intron CG34354 + chr3R 28177418 intron CG34354 + chr3R 28181133 intron CG34354 + chr3R_7_28175001 chr3R_28175001 RAL-304_75b 819 chr3R 28215830 28215850 chr3R 28215907 28215927 6 76 1.0 4.5 2.8 1.6 97 chr3R 28215830 intron CG34354 + chr3R 28215878 intron CG34354 + chr3R 28215927 intron CG34354 + chr3R_6_28215001 chr3R_28215001 RAL-304_75b 820 chr3R 28253338 28253373 chr3R 28255848 28255883 jockey 12 2510 6.5 2.5 4.5 2.2 2545 chr3R 28253338 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_12_28250001 chr3R_28250001 RAL-304_75b 821 chr3R 28303815 28303831 chr3R 28303924 28303945 5 113 2.5 3.0 2.8 1.3 130 chr3R 28303815 exon CG12516 - chr3R 28303880 exon CG12516 - chr3R 28303945 exon CG12516 - chr3R_5_28300001 chr3R_28300001 RAL-304_75b 822 chr3R 28594100 28594123 chr3R 28594179 28594202 4 78 1.5 1.0 1.2 1.8 102 chr3R 28594100 5` UTR CR43440 + chr3R 28594151 5` UTR CR43440 + chr3R 28594202 5` UTR CR43440 + chr3R_4_28590001 chr3R_28590001 RAL-304_75b 823 chr3R 28804550 28804576 chr3R 28804651 28804677 5 100 1.0 2.0 1.5 2.0 127 chr3R 28804550 intergenic not near genes chr3R 28804614 intergenic not near genes chr3R 28804677 intergenic not near genes chr3R_5_28800001 chr3R_28800001 RAL-304_75b 824 chr3R 21907534 21907536 chr3R 28831798 28831802 59 6924266 2.5 7.0 4.8 10.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_59_25365001 chr3R_25365001 RAL-304_75b 825 chr3R 28870625 28870647 chr3R 28870708 28870730 4 82 1.0 5.5 3.2 1.0 105 chr3R 28870625 3` UTR CG33203 - chr3R 28870678 3` UTR CG33203 - chr3R 28870730 3` UTR CG33203 - chr3R_4_28870001 chr3R_28870001 RAL-304_75b 826 chr3R 28882938 28882941 chr3R 28883052 28883056 4 115 1.5 0.0 0.8 2.2 118 chr3R 28882938 intron,3` UTR CG33203 -,CG14527 + chr3R 28882997 intron CG33203 - chr3R 28883056 intron CG33203 - chr3R_4_28880001 chr3R_28880001 RAL-304_75b 827 chr3R 28892325 28892364 chr3R 28892401 28892440 6 76 2.0 5.5 3.8 1.2 115 chr3R 28892325 intron Doa + chr3R 28892382 intron Doa + chr3R 28892440 intron Doa + chr3R_6_28890001 chr3R_28890001 RAL-304_75b 828 chr3R 29070065 29070065 chr3R 29070146 29070146 4 81 0.5 4.0 2.2 1.2 81 chr3R 29070065 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070146 intron CG11873 + chr3R_4_29070001 chr3R_29070001 RAL-304_75b 829 chr3R 29079393 29079401 chr3R 29080764 29080773 NOF 4 1372 0.0 5.5 2.8 1.1 1380 chr3R 29079393 intron CG11873 + chr3R 29080083 intron CG11873 + chr3R 29080773 intron CG11873 + chr3R_4_29080001 chr3R_29080001 RAL-304_75b 830 chr3R 29321062 29321066 chr3R 29321143 29321143 4 80 0.0 0.0 0.0 4.0 81 chr3R 29321062 intergenic not near genes chr3R 29321102 intergenic not near genes chr3R 29321143 intergenic not near genes chr3R_4_29320001 chr3R_29320001 RAL-304_75b 831 chr3R 29406624 29406643 chr3R 29407906 29407925 jockey 4 1283 5.0 1.0 3.0 1.0 1301 chr3R 29406624 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407925 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-304_75b 832 chr3R 29447819 29447838 chr3R 29447926 29447945 6 106 0.5 1.0 0.8 3.3 126 chr3R 29447819 intron Ptp99A + chr3R 29447882 intron Ptp99A + chr3R 29447945 intron Ptp99A + chr3R_6_29445001 chr3R_29445001 RAL-304_75b 833 chr3R 29449362 29449379 chr3R 29449440 29449456 6 78 0.0 0.0 0.0 6.0 94 chr3R 29449362 intron Ptp99A + chr3R 29449409 intron Ptp99A + chr3R 29449456 intron Ptp99A + chr3R_6_29445001 chr3R_29445001 RAL-304_75b 834 chr3R 29472008 29472034 chr3R 29472101 29472125 4 92 0.0 0.5 0.2 3.3 117 chr3R 29472008 intron Ptp99A + chr3R 29472066 intron Ptp99A + chr3R 29472125 intron Ptp99A + chr3R_4_29470001 chr3R_29470001 RAL-304_75b 835 chr3R 29539442 29539458 chr3R 29539518 29539532 11 76 0.0 0.0 0.0 11.0 90 chr3R 29539442 intergenic not near genes chr3R 29539487 intergenic not near genes chr3R 29539532 intergenic not near genes chr3R_11_29535001 chr3R_29535001 RAL-304_75b 836 chr3R 29550262 29550270 chr3R 29550343 29550351 5 80 2.5 3.5 3.0 1.2 89 chr3R 29550262 intergenic not near genes chr3R 29550306 intergenic not near genes chr3R 29550351 intergenic not near genes chr3R_5_29550001 chr3R_29550001 RAL-304_75b 837 chr3R 29590381 29590402 chr3R 29590474 29590495 11 93 1.5 1.0 1.2 5.0 114 chr3R 29590381 intron CG31041 - chr3R 29590438 intron CG31041 - chr3R 29590495 intron CG31041 - chr3R_11_29590001 chr3R_29590001 RAL-304_75b 838 chr3R 29708555 29708584 chr3R 29708633 29708662 4 77 1.0 0.0 0.5 2.7 107 chr3R 29708555 intergenic not near genes chr3R 29708608 intergenic not near genes chr3R 29708662 intergenic not near genes chr3R_4_29705001 chr3R_29705001 RAL-304_75b 839 chr3R 29738285 29738300 chr3R 29739751 29739767 hobo 9 1466 0.0 2.5 1.2 4.1 1482 chr3R 29738285 5` UTR CG1969 + chr3R 29739026 intron CG1969 + chr3R 29739767 5` UTR CG1969 + chr3R_9_29735001 chr3R_29735001 RAL-304_75b 840 chr3R 29758948 29758970 chr3R 29759026 29759048 8 78 0.5 0.0 0.2 6.7 100 chr3R 29758948 3` UTR CR44953 - chr3R 29758998 3` UTR CR44953 - chr3R 29759048 intergenic CR44953 - chr3R_8_29755001 chr3R_29755001 RAL-304_75b 841 chr3R 29882025 29882053 chr3R 29891182 29891210 roo 7 9157 1.0 3.0 2.0 2.3 9185 chr3R 29882025 intron CG31038 + chr3R 29886618 intron CG31038 + chr3R 29891210 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-304_75b 842 chr3R 29975706 29975729 chr3R 29975788 29975811 5 81 2.0 7.0 4.5 0.9 105 chr3R 29975706 intergenic not near genes chr3R 29975758 intergenic not near genes chr3R 29975811 intergenic not near genes chr3R_5_29975001 chr3R_29975001 RAL-304_75b 843 chr3R 30084849 30084881 chr3R 30086316 30086348 hobo 14 1466 1.5 2.0 1.8 5.0 1499 chr3R 30084849 intron sima + chr3R 30085598 intron sima + chr3R 30086348 intron sima + chr3R_14_30085001 chr3R_30085001 RAL-304_75b 844 chr3R 30107265 30107280 chr3R 30107370 30107385 6 105 0.0 1.0 0.5 4.0 120 chr3R 30107265 intron sima + chr3R 30107325 intron sima + chr3R 30107385 intron sima + chr3R_6_30105001 chr3R_30105001 RAL-304_75b 845 chr3R 30193785 30193805 chr3R 30193876 30193896 7 91 4.5 0.0 2.2 2.2 111 chr3R 30193785 intergenic not near genes chr3R 30193840 intergenic not near genes chr3R 30193896 intergenic not near genes chr3R_7_30190001 chr3R_30190001 RAL-304_75b 846 chr3R 30214627 30214628 chr3R 30214705 30214705 4 78 1.0 0.0 0.5 2.7 78 chr3R 30214627 intergenic not near genes chr3R 30214666 intergenic not near genes chr3R 30214705 intergenic not near genes chr3R_4_30210001 chr3R_30210001 RAL-304_75b 847 chr3R 30238771 30238791 chr3R 30239935 30239955 1360 5 1164 4.5 4.0 4.2 1.0 1184 chr3R 30238771 intergenic not near genes chr3R 30239363 intergenic not near genes chr3R 30239955 intergenic not near genes chr3R_5_30235001 chr3R_30235001 RAL-304_75b 848 chr3R 30307122 30307140 chr3R 30307203 30307221 4 81 2.0 0.5 1.2 1.8 99 chr3R 30307122 intron hdc + chr3R 30307172 intron hdc + chr3R 30307221 intron hdc + chr3R_4_30305001 chr3R_30305001 RAL-304_75b 849 chr3R 30375548 30375556 chr3R 30383173 30383181 412 4 7625 1.0 2.5 1.8 1.4 7633 chr3R 30375548 intergenic not near genes chr3R 30379364 intergenic not near genes chr3R 30383181 intergenic not near genes chr3R_4_30375001 chr3R_30375001 RAL-304_75b 850 chr3R 30396221 30396247 chr3R 30404485 30404513 roo 5 8266 0.0 1.0 0.5 3.3 8292 chr3R 30396221 intergenic not near genes chr3R 30400367 intergenic not near genes chr3R 30404513 5` UTR CR45570 + chr3R_5_30400001 chr3R_30400001 RAL-304_75b 851 chr3R 30461509 30461523 chr3R 30461626 30461640 4 117 0.0 0.0 0.0 4.0 131 chr3R 30461509 intron CDase + chr3R 30461574 intron CDase + chr3R 30461640 intron CDase + chr3R_4_30460001 chr3R_30460001 RAL-304_75b 852 chr3R 30679518 30679532 chr3R 30686986 30687001 blood 4 7468 2.0 0.0 1.0 2.0 7483 chr3R 30679518 intergenic not near genes chr3R 30683260 intergenic not near genes chr3R 30687001 intergenic not near genes chr3R_4_30680001 chr3R_30680001 RAL-304_75b 853 chr3R 30690167 30690191 chr3R 30690247 30690275 7 83 2.0 0.0 1.0 3.5 108 chr3R 30690167 intergenic Spn100A + chr3R 30690221 intergenic Spn100A + chr3R 30690275 intergenic Spn100A + chr3R_7_30690001 chr3R_30690001 RAL-304_75b 854 chr3R 30799077 30799083 chr3R 30799150 30799157 4 74 0.5 1.5 1.0 2.0 80 chr3R 30799077 intron wts - chr3R 30799117 intron wts - chr3R 30799157 intron wts - chr3R_4_30795001 chr3R_30795001 RAL-304_75b 855 chr3R 30900528 30900556 chr3R 30900608 30900636 4 80 0.0 1.0 0.5 2.7 108 chr3R 30900528 3` UTR Cyp4c3 + chr3R 30900582 3` UTR Cyp4c3 + chr3R 30900636 3` UTR Cyp4c3 + chr3R_4_30900001 chr3R_30900001 RAL-304_75b 856 chr3R 30994137 30994143 chr3R 30994247 30994252 4 110 2.0 0.0 1.0 2.0 115 chr3R 30994137 intron 5-HT7 - chr3R 30994194 intron 5-HT7 - chr3R 30994252 intron 5-HT7 - chr3R_4_30990001 chr3R_30990001 RAL-304_75b 857 chr3R 31116401 31116414 chr3R 31116497 31116506 5 93 2.0 1.0 1.5 2.0 105 chr3R 31116401 intergenic not near genes chr3R 31116454 intergenic not near genes chr3R 31116506 intergenic not near genes chr3R_5_31115001 chr3R_31115001 RAL-304_75b 858 chr3R 31137161 31137177 chr3R 31137241 31137255 4 79 0.5 1.0 0.8 2.2 94 chr3R 31137161 intron Gycbeta100B + chr3R 31137208 intron Gycbeta100B + chr3R 31137255 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-304_75b 859 chr3R 31279382 31279402 chr3R 31285573 31285593 diver 7 6190 4.0 0.5 2.2 2.2 6211 chr3R 31279382 intergenic not near genes chr3R 31282488 intergenic not near genes chr3R 31285593 intergenic not near genes chr3R_7_31280001 chr3R_31280001 RAL-304_75b 860 chr3R 31413102 31413103 chr3R 31418301 31418302 copia 4 5200 2.0 0.5 1.2 1.8 5200 chr3R 31413102 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418302 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-304_75b 861 chr3R 31431120 31431123 chr3R 31431206 31431207 5 85 4.0 2.5 3.2 1.2 87 chr3R 31431120 intron Gprk2 + chr3R 31431164 intron Gprk2 + chr3R 31431207 intron Gprk2 + chr3R_5_31430001 chr3R_31430001 RAL-304_75b 862 chr3R 31538498 31538522 chr3R 31538575 31538600 6 78 1.0 3.5 2.2 1.9 102 chr3R 31538498 intergenic not near genes chr3R 31538549 intergenic not near genes chr3R 31538600 intergenic not near genes chr3R_6_31535001 chr3R_31535001 RAL-304_75b 863 chr3R 31831547 31831555 chr3R 31831626 31831634 4 78 1.0 0.0 0.5 2.7 87 chr3R 31831547 intron RhoGAP100F + chr3R 31831590 intron RhoGAP100F + chr3R 31831634 intron RhoGAP100F + chr3R_4_31830001 chr3R_31830001 RAL-304_75b 864 chr3R 31858195 31858199 chr3R 31858296 31858299 4 102 0.0 3.0 1.5 1.6 104 chr3R 31858195 intron heph - chr3R 31858247 intron heph - chr3R 31858299 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-304_75b 865 chr3R 31870661 31870679 chr3R 31870746 31870770 4 90 1.0 0.0 0.5 2.7 109 chr3R 31870661 intron heph - chr3R 31870716 intron heph - chr3R 31870770 intron heph - chr3R_4_31870001 chr3R_31870001 RAL-304_75b 866 chr3R 32022325 32022348 chr3R 32022427 32022450 10 101 0.0 2.0 1.0 5.0 125 chr3R 32022325 5` UTR CR45557 + chr3R 32022388 5` UTR CR45557 + chr3R 32022450 5` UTR CR45557 + chr3R_10_32020001 chr3R_32020001 RAL-304_75b 867 chr4 257402 257434 chr4 257572 257604 6 170 0.0 0.0 0.0 6.0 202 chr4 257402 exon RhoGAP102A + chr4 257503 intron RhoGAP102A + chr4 257604 intron RhoGAP102A + chr4_6_255001 chr4_255001 RAL-304_75b 868 chrX 318472 318491 chrX 323558 323577 flea 5 5086 4.5 1.0 2.8 1.3 5105 chrX 318472 intron,intron CG3777 +,CG32816 - chrX 321024 intron,intron CG3777 +,CG32816 - chrX 323577 intron,intron CG3777 +,CG32816 - chrX_5_320001 chrX_320001 RAL-304_75b 869 chrX 609883 609909 chrX 609974 610000 9 91 1.0 3.0 2.0 3.0 117 chrX 609883 intron CG13366 - chrX 609942 intron CG13366 - chrX 610000 intron CG13366 - chrX_9_605001 chrX_605001 RAL-304_75b 870 chrX 802289 802309 chrX 802365 802383 8 76 0.0 3.0 1.5 3.2 94 chrX 802289 exon CG13359 - chrX 802336 exon CG13359 - chrX 802383 exon CG13359 - chrX_8_800001 chrX_800001 RAL-304_75b 871 chrX 812267 812288 chrX 817897 817919 297 4 5631 0.0 2.0 1.0 2.0 5652 chrX 812267 intron CG43867 - chrX 815093 intron CG43867 - chrX 817919 intron CG43867 - chrX_4_815001 chrX_815001 RAL-304_75b 872 chrX 827606 827606 chrX 835398 835398 roo 4 7792 5.0 1.0 3.0 1.0 7792 chrX 827606 intron CG43867 - chrX 831502 intron CG43867 - chrX 835398 intron CG43867 - chrX_4_830001 chrX_830001 RAL-304_75b 873 chrX 906714 906733 chrX 908503 908521 S-element 9 1789 1.0 4.5 2.8 2.4 1807 chrX 906714 intron CG43867 - chrX 907618 intron CG43867 - chrX 908521 intron CG43867 - chrX_9_905001 chrX_905001 RAL-304_75b 874 chrX 1053118 1053123 chrX 16983076 16983076 8 15929957 3.0 1.0 2.0 2.7 15929958 chrX 1053118 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-304_75b 875 chrX 1253737 1253738 chrX 1253819 1253819 4 81 1.0 2.0 1.5 1.6 82 chrX 1253737 intron Atf3 - chrX 1253778 intron Atf3 - chrX 1253819 intron Atf3 - chrX_4_1250001 chrX_1250001 RAL-304_75b 876 chrX 1357770 1357804 chrX 1367940 1367974 Doc 5 10170 2.5 4.0 3.2 1.2 10204 chrX 1357770 intergenic png - chrX 1362872 intergenic not near genes chrX 1367974 intergenic not near genes chrX_5_1360001 chrX_1360001 RAL-304_75b 877 chrX 1418854 1418862 chrX 1418984 1418992 4 130 2.5 0.5 1.5 1.6 138 chrX 1418854 intron futsch + chrX 1418923 intron futsch + chrX 1418992 intron futsch + chrX_4_1415001 chrX_1415001 RAL-304_75b 878 chrX 1423659 1423675 chrX 1423757 1423771 4 96 0.0 0.0 0.0 4.0 112 chrX 1423659 intron futsch + chrX 1423715 intron futsch + chrX 1423771 intron futsch + chrX_4_1420001 chrX_1420001 RAL-304_75b 879 chrX 1930548 1930559 chrX 1938116 1938130 opus 8 7570 1.0 0.0 0.5 5.3 7582 chrX 1930548 intergenic CG11596 + chrX 1934339 intergenic not near genes chrX 1938130 3` UTR CG3857 - chrX_8_1930001 chrX_1930001 RAL-304_75b 880 chrX 2578821 2578829 chrX 2578912 2578921 10 92 0.0 1.0 0.5 6.7 100 chrX 2578821 intergenic Pdfr +,Vha36-3 - chrX 2578871 intergenic Vha36-3 -,Pdfr + chrX 2578921 intergenic Vha36-3 -,Pdfr + chrX_10_2575001 chrX_2575001 RAL-304_75b 881 chrX 2844900 2844912 chrX 2852310 2852321 mdg1 5 7410 0.5 0.0 0.2 4.2 7421 chrX 2844900 intron kirre + chrX 2848610 intron kirre + chrX 2852321 intron kirre + chrX_5_2845001 chrX_2845001 RAL-304_75b 882 chrX 3197766 3197794 chrX 3197879 3197909 5 114 0.5 0.0 0.2 4.2 143 chrX 3197766 intron dnc + chrX 3197838 intron dnc + chrX 3197909 intron dnc + chrX_5_3195001 chrX_3195001 RAL-304_75b 883 chrX 2376410 2376411 chrX 3365220 3365220 4 988809 6.0 2.5 4.2 0.8 988810 chrX 2376410 intron PsGEF - chrX 2870815 intron kirre + chrX 3365220 intergenic not near genes chrX_4_2870001 chrX_2870001 RAL-304_75b 884 chrX 3513760 3513778 chrX 3513843 3513861 12 83 2.0 2.0 2.0 4.0 101 chrX 3513760 intron,intron CR44999 +,CG32791 - chrX 3513810 intron,intron CR44999 +,CG32791 - chrX 3513861 intron,intron CR44999 +,CG32791 - chrX_12_3510001 chrX_3510001 RAL-304_75b 885 chrX 3657413 3657439 chrX 3657493 3657518 4 80 2.5 0.0 1.2 1.8 105 chrX 3657413 intron AstA-R1 + chrX 3657466 intron AstA-R1 + chrX 3657518 intron AstA-R1 + chrX_4_3655001 chrX_3655001 RAL-304_75b 886 chrX 3703709 3703719 chrX 3703796 3703807 5 87 0.0 0.5 0.2 4.2 98 chrX 3703709 intergenic CR45102 + chrX 3703758 intergenic CR45102 + chrX 3703807 intergenic not near genes chrX_5_3700001 chrX_3700001 RAL-304_75b 887 chrX 3862834 3862835 chrX 3862918 3862918 4 84 0.5 0.5 0.5 2.7 84 chrX 3862834 intergenic yin - chrX 3862876 intergenic yin - chrX 3862918 intergenic yin - chrX_4_3860001 chrX_3860001 RAL-304_75b 888 chrX 4700400 4700403 chrX 4700743 4700746 jockey 5 342 3.0 1.5 2.2 1.6 346 chrX 4700400 3` UTR ctp + chrX 4700573 3` UTR ctp + chrX 4700746 3` UTR ctp + chrX_5_4700001 chrX_4700001 RAL-304_75b 889 chrX 4763264 4763285 chrX 4763752 4763773 Stalker4 7 488 0.0 3.0 1.5 2.8 509 chrX 4763264 intergenic not near genes chrX 4763518 intergenic not near genes chrX 4763773 intergenic not near genes chrX_7_4760001 chrX_4760001 RAL-304_75b 890 chrX 4859893 4859900 chrX 4860002 4860009 4 109 0.0 4.5 2.2 1.2 116 chrX 4859893 intron CG42594 + chrX 4859951 intron CG42594 + chrX 4860009 intron CG42594 + chrX_4_4855001 chrX_4855001 RAL-304_75b 891 chrX 5345368 5345391 chrX 5345510 5345533 7 142 0.0 2.5 1.2 3.2 165 chrX 5345368 intron SK + chrX 5345450 intron SK + chrX 5345533 intron SK + chrX_7_5345001 chrX_5345001 RAL-304_75b 892 chrX 5524846 5524860 chrX 5528709 5528723 412 5 3863 0.5 1.5 1.0 2.5 3877 chrX 5524846 intergenic snoRNA:Psi28S-3342 - chrX 5526784 intergenic not near genes chrX 5528723 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 RAL-304_75b 893 chrX 5966804 5966813 chrX 5966885 5966895 5 81 0.5 0.0 0.2 4.2 91 chrX 5966804 intron Grip + chrX 5966850 intron Grip + chrX 5966895 intron Grip + chrX_5_5965001 chrX_5965001 RAL-304_75b 894 chrX 6335219 6335234 chrX 6337727 6337744 Tirant 5 2509 0.0 0.0 0.0 5.0 2525 chrX 6335219 intergenic not near genes chrX 6336482 intergenic not near genes chrX 6337744 intergenic CG3842 + chrX_5_6335001 chrX_6335001 RAL-304_75b 895 chrX 6729639 6729669 chrX 6729970 6730000 6 331 1.5 1.0 1.2 2.7 361 chrX 6729639 intron CG3168 - chrX 6729820 intron CG3168 - chrX 6730000 intron CG3168 - chrX_6_6725001 chrX_6725001 RAL-304_75b 896 chrX 6989502 6989515 chrX 6989589 6989601 5 87 2.0 0.0 1.0 2.5 99 chrX 6989502 intron ogre - chrX 6989552 intron ogre - chrX 6989601 intron ogre - chrX_5_6985001 chrX_6985001 RAL-304_75b 897 chrX 7023629 7023629 chrX 7031018 7031019 Tabor 5 7390 1.5 4.5 3.0 1.2 7390 chrX 7023629 intron CG12541 - chrX 7027324 intron CG12541 - chrX 7031019 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-304_75b 898 chrX 7294523 7294543 chrX 7294620 7294641 6 97 0.5 1.5 1.0 3.0 118 chrX 7294523 intron,intron CR44357 -,CG1677 - chrX 7294582 intron,intron CR44357 -,CG1677 - chrX 7294641 intron,intron CR44357 -,CG1677 - chrX_6_7290001 chrX_7290001 RAL-304_75b 899 chrX 7702917 7702934 chrX 7703356 7703373 jockey 4 439 0.0 3.5 1.8 1.4 456 chrX 7702917 intron CHES-1-like - chrX 7703145 intron CHES-1-like - chrX 7703373 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-304_75b 900 chrX 7832452 7832454 chrX 7832540 7832543 4 89 0.5 1.0 0.8 2.2 91 chrX 7832452 intron CG1402 + chrX 7832498 intron CG1402 + chrX 7832543 intron CG1402 + chrX_4_7830001 chrX_7830001 RAL-304_75b 901 chrX 7960878 7960887 chrX 7960967 7960972 6 88 2.0 0.0 1.0 3.0 94 chrX 7960878 intron,5` UTR sws -,CR45620 + chrX 7960925 intron sws - chrX 7960972 intron sws - chrX_6_7960001 chrX_7960001 RAL-304_75b 902 chrX 8024657 8024664 chrX 8024732 8024737 4 75 1.0 0.0 0.5 2.7 80 chrX 8024657 intron Tbh + chrX 8024697 intron Tbh + chrX 8024737 intron Tbh + chrX_4_8020001 chrX_8020001 RAL-304_75b 903 chrX 8171206 8171207 chrX 18003097 18003099 4 9831892 2.0 0.0 1.0 2.0 9831893 chrX 8171206 3` UTR slpr - chrX 13087152 intron hep - chrX 18003099 intron Sh - chrX_4_13085001 chrX_13085001 RAL-304_75b 904 chrX 8506552 8506556 chrX 8506759 8506764 5 208 0.5 4.0 2.2 1.6 212 chrX 8506552 intron CG33181 + chrX 8506658 intron CG33181 + chrX 8506764 intron CG33181 + chrX_5_8505001 chrX_8505001 RAL-304_75b 905 chrX 8922331 8922362 chrX 8922763 8922795 jockey 4 433 0.5 1.5 1.0 2.0 464 chrX 8922331 intron rdgA + chrX 8922563 intron rdgA + chrX 8922795 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-304_75b 906 chrX 8948757 8948780 chrX 8956267 8956288 roo 5 7510 1.5 1.5 1.5 2.0 7531 chrX 8948757 intron rdgA + chrX 8952522 intron rdgA + chrX 8956288 intron rdgA + chrX_5_8950001 chrX_8950001 RAL-304_75b 907 chrX 9575801 9575815 chrX 9576121 9576139 mdg3 7 323 3.0 1.5 2.2 2.2 338 chrX 9575801 intron,exon CG32699 -,CG42395 - chrX 9575970 intron,intron CG32699 -,CG42395 - chrX 9576139 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 RAL-304_75b 908 chrX 9791864 9791893 chrX 9791960 9791990 5 97 2.0 1.0 1.5 2.0 126 chrX 9791864 intron CG32698 + chrX 9791927 intron CG32698 + chrX 9791990 intron CG32698 + chrX_5_9790001 chrX_9790001 RAL-304_75b 909 chrX 10772684 10772698 chrX 10772767 10772781 Tirant 6 83 1.0 0.5 0.8 3.3 97 chrX 10772684 intron CG15211 + chrX 10772732 intron CG15211 + chrX 10772781 intron CG15211 + chrX_6_10770001 chrX_10770001 RAL-304_75b 910 chrX 11839040 11839053 chrX 11839287 11839301 4 248 0.0 0.5 0.2 3.3 261 chrX 11839040 intergenic not near genes chrX 11839170 intergenic Cyp28c1 + chrX 11839301 intergenic Cyp28c1 + chrX_4_11835001 chrX_11835001 RAL-304_75b 911 chrX 12194948 12194964 chrX 12195063 12195082 4 117 0.5 1.0 0.8 2.2 134 chrX 12194948 intron Ten-a + chrX 12195015 intron Ten-a + chrX 12195082 intron Ten-a + chrX_4_12195001 chrX_12195001 RAL-304_75b 912 chrX 12202785 12202787 chrX 12202869 12202871 4 84 1.0 3.5 2.2 1.2 86 chrX 12202785 intron Ten-a + chrX 12202828 intron Ten-a + chrX 12202871 intron Ten-a + chrX_4_12200001 chrX_12200001 RAL-304_75b 913 chrX 12301971 12301988 chrX 12303277 12303294 X-element 6 1306 0.0 3.0 1.5 2.4 1323 chrX 12301971 intron Ten-a + chrX 12302632 intron Ten-a + chrX 12303294 intron Ten-a + chrX_6_12300001 chrX_12300001 RAL-304_75b 914 chrX 12375502 12375502 chrX 12375598 12375600 5 97 0.5 1.0 0.8 2.8 98 chrX 12375502 intergenic Ir11a - chrX 12375551 intergenic Ir11a - chrX 12375600 exon Ir11a - chrX_5_12375001 chrX_12375001 RAL-304_75b 915 chrX 12465478 12465493 chrX 12465554 12465569 4 76 1.5 1.0 1.2 1.8 91 chrX 12465478 exon CG42258 + chrX 12465524 intron CG42258 + chrX 12465569 intron CG42258 + chrX_4_12465001 chrX_12465001 RAL-304_75b 916 chrX 12837604 12837633 chrX 12837885 12837914 4 280 0.5 0.0 0.2 3.3 310 chrX 12837604 intron Pde9 - chrX 12837759 intron Pde9 - chrX 12837914 intron Pde9 - chrX_4_12835001 chrX_12835001 RAL-304_75b 917 chrX 12859096 12859118 chrX 12859175 12859198 5 80 0.0 2.0 1.0 2.5 102 chrX 12859096 intron Pde9 - chrX 12859147 intron Pde9 - chrX 12859198 intron Pde9 - chrX_5_12855001 chrX_12855001 RAL-304_75b 918 chrX 13235908 13235921 chrX 13235986 13236000 8 78 0.0 1.5 0.8 4.4 92 chrX 13235908 intron mew - chrX 13235954 intron,3` UTR mew -,CG32639 - chrX 13236000 intron,3` UTR mew -,CG32639 - chrX_8_13235001 chrX_13235001 RAL-304_75b 919 chrX 13269215 13269232 chrX 13269291 13269308 5 76 0.0 0.0 0.0 5.0 93 chrX 13269215 intron HDAC4 - chrX 13269262 intron HDAC4 - chrX 13269308 intron HDAC4 - chrX_5_13265001 chrX_13265001 RAL-304_75b 920 chrX 14105022 14105047 chrX 14114172 14114198 roo 4 9151 1.5 0.5 1.0 2.0 9176 chrX 14105022 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114198 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-304_75b 921 chrX 14131503 14131516 chrX 14131584 14131596 5 80 1.0 1.0 1.0 2.5 93 chrX 14131503 intergenic not near genes chrX 14131550 intergenic not near genes chrX 14131596 intergenic not near genes chrX_5_14130001 chrX_14130001 RAL-304_75b 922 chrX 14174210 14174224 chrX 14174290 14174303 6 79 1.0 2.0 1.5 2.4 93 chrX 14174210 intergenic not near genes chrX 14174256 intergenic CG1368 + chrX 14174303 intergenic CG1368 + chrX_6_14170001 chrX_14170001 RAL-304_75b 923 chrX 14209485 14209487 chrX 14209576 14209577 4 90 0.0 0.0 0.0 4.0 92 chrX 14209485 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209531 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209577 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-304_75b 924 chrX 14411277 14411286 chrX 14411355 14411364 5 78 0.0 0.5 0.2 4.2 87 chrX 14411277 intron dpr8 + chrX 14411320 intron dpr8 + chrX 14411364 intron dpr8 + chrX_5_14410001 chrX_14410001 RAL-304_75b 925 chrX 14589694 14589702 chrX 14589935 14589943 pogo 4 241 1.0 0.0 0.5 2.7 249 chrX 14589694 intron CG9413 - chrX 14589818 intron CG9413 - chrX 14589943 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-304_75b 926 chrX 14636465 14636491 chrX 14641901 14641932 I-element 4 5440 0.0 0.5 0.2 3.3 5467 chrX 14636465 intron NetA - chrX 14639198 intron NetA - chrX 14641932 intron NetA - chrX_4_14635001 chrX_14635001 RAL-304_75b 927 chrX 14767960 14767974 chrX 14768039 14768054 5 80 2.5 3.5 3.0 1.2 94 chrX 14767960 intergenic not near genes chrX 14768007 intergenic not near genes chrX 14768054 intergenic not near genes chrX_5_14765001 chrX_14765001 RAL-304_75b 928 chrX 14936853 14936892 chrX 14946120 14946149 roo 4 9259 0.0 5.0 2.5 1.1 9296 chrX 14936853 intron pdgy - chrX 14941501 intron pdgy - chrX 14946149 intron pdgy - chrX_4_14940001 chrX_14940001 RAL-304_75b 929 chrX 14968086 14968100 chrX 14968165 14968179 5 79 0.0 4.0 2.0 1.7 93 chrX 14968086 intron eag + chrX 14968132 intron eag + chrX 14968179 intron eag + chrX_5_14965001 chrX_14965001 RAL-304_75b 930 chrX 15519819 15519831 chrX 15519897 15519909 7 78 0.0 1.0 0.5 4.7 90 chrX 15519819 intron Ac13E - chrX 15519864 intron Ac13E - chrX 15519909 intron Ac13E - chrX_7_15515001 chrX_15515001 RAL-304_75b 931 chrX 15678052 15678064 chrX 15678129 15678140 7 77 0.0 0.0 0.0 7.0 88 chrX 15678052 intergenic CG12708 + chrX 15678096 intergenic CG12708 + chrX 15678140 intergenic CG12708 + chrX_7_15675001 chrX_15675001 RAL-304_75b 932 chrX 15959544 15959548 chrX 15959632 15959636 5 87 5.0 2.5 3.8 1.0 92 chrX 15959544 intron mmd - chrX 15959590 intron mmd - chrX 15959636 intron mmd - chrX_5_15955001 chrX_15955001 RAL-304_75b 933 chrX 16080289 16080306 chrX 16080369 16080386 7 79 0.0 7.5 3.8 1.5 97 chrX 16080289 exon Tob - chrX 16080338 exon Tob - chrX 16080386 exon Tob - chrX_7_16080001 chrX_16080001 RAL-304_75b 934 chrX 16689621 16689648 chrX 16689707 16689734 9 84 1.0 0.5 0.8 5.0 113 chrX 16689621 intron Sep4 - chrX 16689678 intron Sep4 - chrX 16689734 intron Sep4 - chrX_9_16685001 chrX_16685001 RAL-304_75b 935 chrX 16983076 16983076 chrX 19404963 19404965 4 2421888 3.0 5.0 4.0 0.8 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-304_75b 936 chrX 17063179 17063193 chrX 17063266 17063280 4 87 0.0 1.0 0.5 2.7 101 chrX 17063179 intron CG45002 - chrX 17063230 intron CG45002 - chrX 17063280 intron CG45002 - chrX_4_17060001 chrX_17060001 RAL-304_75b 937 chrX 17122640 17122674 chrX 17122729 17122765 4 90 0.0 1.0 0.5 2.7 125 chrX 17122640 intron CG5004 + chrX 17122702 intron CG5004 + chrX 17122765 intron CG5004 + chrX_4_17120001 chrX_17120001 RAL-304_75b 938 chrX 17195229 17195237 chrX 17200315 17200322 flea 4 5085 2.5 2.5 2.5 1.1 5093 chrX 17195229 3` UTR baz + chrX 17197776 3` UTR baz + chrX 17200322 3` UTR baz + chrX_4_17195001 chrX_17195001 RAL-304_75b 939 chrX 17211446 17211448 chrX 17212151 17212151 4 704 7.0 5.5 6.2 0.6 705 chrX 17211446 intergenic not near genes chrX 17211798 intergenic not near genes chrX 17212151 intergenic CG18258 + chrX_4_17210001 chrX_17210001 RAL-304_75b 940 chrX 17352611 17352614 chrX 17352714 17352717 6 103 0.0 1.5 0.8 3.3 106 chrX 17352611 intergenic not near genes chrX 17352664 intergenic not near genes chrX 17352717 intergenic not near genes chrX_6_17350001 chrX_17350001 RAL-304_75b 941 chrX 17476470 17476487 chrX 17476547 17476564 4 77 1.5 0.0 0.8 2.2 94 chrX 17476470 intron CG43658 - chrX 17476517 intron CG43658 - chrX 17476564 intron CG43658 - chrX_4_17475001 chrX_17475001 RAL-304_75b 942 chrX 17680908 17680923 chrX 17680985 17681000 5 76 4.0 2.0 3.0 1.2 92 chrX 17680908 intron chas - chrX 17680954 intron chas - chrX 17681000 intron chas - chrX_5_17680001 chrX_17680001 RAL-304_75b 943 chrX 17740383 17740406 chrX 17740458 17740481 4 76 0.0 2.0 1.0 2.0 98 chrX 17740383 intron CG42684 + chrX 17740432 intron CG42684 + chrX 17740481 intron CG42684 + chrX_4_17740001 chrX_17740001 RAL-304_75b 944 chrX 18122824 18122851 chrX 18122899 18122926 4 76 0.0 1.5 0.8 2.2 102 chrX 18122824 5` UTR CR45606 + chrX 18122875 5` UTR CR45606 + chrX 18122926 intergenic CR45606 + chrX_4_18120001 chrX_18120001 RAL-304_75b 945 chrX 18194082 18194088 chrX 18194616 18194622 BS 4 534 3.5 3.5 3.5 0.9 540 chrX 18194082 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194622 intron Frq2 + chrX_4_18190001 chrX_18190001 RAL-304_75b 946 chrX 18427381 18427395 chrX 18427792 18427806 8 411 1.0 1.5 1.2 3.6 425 chrX 18427381 intergenic CG42323 + chrX 18427594 intergenic not near genes chrX 18427806 intergenic not near genes chrX_8_18425001 chrX_18425001 RAL-304_75b 947 chrX 18474319 18474336 chrX 18474401 18474419 7 82 1.5 0.0 0.8 3.9 100 chrX 18474319 intron CG32547 - chrX 18474369 intron CG32547 - chrX 18474419 intron CG32547 - chrX_7_18470001 chrX_18470001 RAL-304_75b 948 chrX 18574805 18574815 chrX 18574885 18574894 5 80 1.0 1.0 1.0 2.5 89 chrX 18574805 intergenic not near genes chrX 18574850 intergenic not near genes chrX 18574894 intergenic not near genes chrX_5_18570001 chrX_18570001 RAL-304_75b 949 chrX 18645020 18645040 chrX 18645118 18645138 6 98 0.0 0.0 0.0 6.0 118 chrX 18645020 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645138 intron Rip11 - chrX_6_18645001 chrX_18645001 RAL-304_75b 950 chrX 18698852 18698875 chrX 18698969 18698992 4 117 0.0 3.0 1.5 1.6 140 chrX 18698852 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18698992 intergenic not near genes chrX_4_18695001 chrX_18695001 RAL-304_75b 951 chrX 18817927 18817957 chrX 18818015 18818045 6 88 0.0 2.5 1.2 2.7 118 chrX 18817927 intron CG42450 + chrX 18817986 intron CG42450 + chrX 18818045 intron CG42450 + chrX_6_18815001 chrX_18815001 RAL-304_75b 952 chrX 18896533 18896533 chrX 18896640 18896644 5 110 1.0 0.5 0.8 2.8 111 chrX 18896533 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896644 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-304_75b 953 chrX 19119699 19119707 chrX 19119785 19119793 5 86 3.5 0.0 1.8 1.8 94 chrX 19119699 intergenic not near genes chrX 19119746 intergenic not near genes chrX 19119793 intergenic not near genes chrX_5_19115001 chrX_19115001 RAL-304_75b 954 chrX 19136568 19136580 chrX 19143487 19143496 412 5 6919 0.5 0.5 0.5 3.3 6928 chrX 19136568 intergenic not near genes chrX 19140032 intergenic not near genes chrX 19143496 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 RAL-304_75b 955 chrX 13057298 13057299 chrX 19242812 19242813 8 6185514 4.0 2.5 3.2 1.9 6185515 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242813 intergenic not near genes chrX_8_16150001 chrX_16150001 RAL-304_75b 956 chrX 19380166 19380182 chrX 19380406 19380423 pogo 4 241 2.0 3.0 2.5 1.1 257 chrX 19380166 intron kek5 + chrX 19380294 intron kek5 + chrX 19380423 intron kek5 + chrX_4_19380001 chrX_19380001 RAL-304_75b 957 chrX 19472131 19472153 chrX 19472701 19472723 jockey 5 570 3.0 2.5 2.8 1.3 592 chrX 19472131 intergenic kek5 + chrX 19472427 intergenic not near genes chrX 19472723 intergenic not near genes chrX_5_19470001 chrX_19470001 RAL-304_75b 958 chrX 19500728 19500734 chrX 19500815 19500821 5 87 0.0 2.0 1.0 2.5 93 chrX 19500728 intron,intron CG14200 +,Pfrx + chrX 19500774 intron,intron CG14200 +,Pfrx + chrX 19500821 intron,intron CG14200 +,Pfrx + chrX_5_19500001 chrX_19500001 RAL-304_75b 959 chrX 19542138 19542165 chrX 19542236 19542263 6 97 1.0 0.0 0.5 4.0 125 chrX 19542138 intron CG32532 - chrX 19542200 intron CG32532 - chrX 19542263 intron CG32532 - chrX_6_19540001 chrX_19540001 RAL-304_75b 960 chrX 19762585 19762590 chrX 19762665 19762668 4 80 2.0 0.0 1.0 2.0 83 chrX 19762585 5` UTR CG12702 - chrX 19762626 5` UTR CG12702 - chrX 19762668 5` UTR CG12702 - chrX_4_19760001 chrX_19760001 RAL-304_75b 961 chrX 19769519 19769523 chrX 19769595 19769600 5 77 5.0 5.0 5.0 0.8 81 chrX 19769519 intron vfl - chrX 19769560 intron vfl - chrX 19769600 intron vfl - chrX_5_19765001 chrX_19765001 RAL-304_75b 962 chrX 19883776 19883796 chrX 19883858 19883881 4 84 3.0 0.0 1.5 1.6 105 chrX 19883776 intron Hers + chrX 19883828 intron Hers + chrX 19883881 intron Hers + chrX_4_19880001 chrX_19880001 RAL-304_75b 963 chrX 20312896 20312905 chrX 20312974 20312983 4 77 1.5 4.5 3.0 1.0 87 chrX 20312896 intron CG1504 - chrX 20312940 intron CG1504 - chrX 20312983 intron CG1504 - chrX_4_20310001 chrX_20310001 RAL-304_75b 964 chrX 20359142 20359149 chrX 20359219 20359227 4 76 3.0 2.5 2.8 1.1 85 chrX 20359142 intergenic not near genes chrX 20359184 intergenic not near genes chrX 20359227 intergenic not near genes chrX_4_20355001 chrX_20355001 RAL-304_75b 965 chrX 20377325 20377347 chrX 20378792 20378814 hobo 7 1467 2.5 2.5 2.5 2.0 1489 chrX 20377325 intergenic not near genes chrX 20378070 intergenic not near genes chrX 20378814 intergenic not near genes chrX_7_20375001 chrX_20375001 RAL-304_75b 966 chrX 20443169 20443183 chrX 20443245 20443259 6 75 2.5 0.0 1.2 2.7 90 chrX 20443169 exon CG1695 + chrX 20443214 intron CG1695 + chrX 20443259 intron CG1695 + chrX_6_20440001 chrX_20440001 RAL-304_75b 967 chrX 20493924 20493927 chrX 20494083 20494088 5 160 0.0 1.5 0.8 2.8 164 chrX 20493924 intron RhoGAP19D - chrX 20494006 intron RhoGAP19D - chrX 20494088 intron RhoGAP19D - chrX_5_20490001 chrX_20490001 RAL-304_75b 968 chrX 20499176 20499179 chrX 20499259 20499262 4 83 2.5 3.0 2.8 1.1 86 chrX 20499176 intron RhoGAP19D - chrX 20499219 intron RhoGAP19D - chrX 20499262 intron RhoGAP19D - chrX_4_20495001 chrX_20495001 RAL-304_75b 969 chrX 20504144 20504151 chrX 20505661 20505672 transib2 7 1520 5.0 1.0 3.0 1.8 1528 chrX 20504144 intron RhoGAP19D - chrX 20504908 intron RhoGAP19D - chrX 20505672 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-304_75b 970 chrX 20528609 20528633 chrX 20528957 20528981 7 348 2.5 3.5 3.0 1.8 372 chrX 20528609 intergenic not near genes chrX 20528795 intergenic not near genes chrX 20528981 intergenic not near genes chrX_7_20525001 chrX_20525001 RAL-304_75b 971 chrX 20860276 20860276 chrX 20860374 20860375 4 99 0.0 5.0 2.5 1.1 99 chrX 20860276 intron shakB - chrX 20860326 intron shakB - chrX 20860375 intron shakB - chrX_4_20860001 chrX_20860001 RAL-304_75b 972 chrX 20940736 20940750 chrX 20942205 20942219 hobo 4 1468 1.0 0.5 0.8 2.2 1483 chrX 20940736 intergenic not near genes chrX 20941478 intergenic not near genes chrX 20942219 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-304_75b 973 chrX 20948264 20948271 chrX 20948353 20948359 4 89 0.0 0.0 0.0 4.0 95 chrX 20948264 intergenic not near genes chrX 20948312 intergenic not near genes chrX 20948359 intergenic not near genes chrX_4_20945001 chrX_20945001 RAL-304_75b 974 chrX 21388378 21388397 chrX 21388535 21388553 7 157 0.5 0.0 0.2 5.8 175 chrX 21388378 intergenic Hlc - chrX 21388466 intergenic not near genes chrX 21388553 intergenic mst + chrX_7_21385001 chrX_21385001 RAL-304_75b 975 chrX 21455217 21455223 chrX 21455396 21455402 6 179 1.5 0.0 0.8 3.3 185 chrX 21455217 intron CG42343 - chrX 21455310 intron CG42343 - chrX 21455402 intron CG42343 - chrX_6_21455001 chrX_21455001 RAL-304_75b 976 chrX 21458701 21458707 chrX 21464136 21464142 Ivk 4 5436 1.0 4.0 2.5 1.1 5441 chrX 21458701 intergenic not near genes chrX 21461422 intergenic not near genes chrX 21464142 intergenic not near genes chrX_4_21460001 chrX_21460001 RAL-304_75b 977 chrX 21492275 21492276 chrX 21492388 21492388 5 113 3.5 0.0 1.8 1.8 113 chrX 21492275 intergenic not near genes chrX 21492332 intergenic not near genes chrX 21492388 intergenic not near genes chrX_5_21490001 chrX_21490001 RAL-304_75b 978 chrX 21565412 21565441 chrX 21565490 21565518 9 78 3.0 0.0 1.5 3.6 106 chrX 21565412 intergenic not near genes chrX 21565465 intergenic not near genes chrX 21565518 intergenic not near genes chrX_9_21565001 chrX_21565001 RAL-304_75b 979 chrX 21668282 21668282 chrX 21668367 21668367 4 85 8.0 6.0 7.0 0.5 85 chrX 21668282 intergenic not near genes chrX 21668324 intergenic not near genes chrX 21668367 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-304_75b 980 chrX 22661970 22661974 chrX 22662051 22662055 4 80 0.0 0.5 0.2 3.3 85 chrX 22661970 intron CR44997 + chrX 22662012 intron CR44997 + chrX 22662055 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-304_75b 981 chrX 22665791 22665814 chrX 22665870 22665893 5 79 0.5 0.0 0.2 4.2 102 chrX 22665791 intron CR44997 + chrX 22665842 intron CR44997 + chrX 22665893 intron CR44997 + chrX_5_22665001 chrX_22665001 RAL-304_75b 982 chrX 22811987 22812000 chrX 22816759 22816772 F-element 8 4772 2.5 0.0 1.2 3.6 4785 chrX 22811987 intergenic CG12446 - chrX 22814380 intergenic not near genes chrX 22816772 intergenic not near genes chrX_8_22810001 chrX_22810001 RAL-304_75b 983 chrX 22824236 22824424 chrX 22824362 22824557 6 131 0.5 0.0 0.2 5.0 321 chrX 22824236 intergenic fog - chrX 22824396 3` UTR fog - chrX 22824557 3` UTR fog - chrX_6_22820001 chrX_22820001 RAL-304_75b 984 chrX 22870885 22870893 chrX 22870974 22870983 6 90 1.0 1.5 1.2 2.7 98 chrX 22870885 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22870983 intron,3` UTR CG42346 +,CR43656 - chrX_6_22870001 chrX_22870001 RAL-304_75b 985 chrX 22982858 22982871 chrX 22983041 22983054 9 183 0.0 0.0 0.0 9.0 196 chrX 22982858 intron,intron stnA -,stnB - chrX 22982956 intron,intron stnA -,stnB - chrX 22983054 intron,intron stnA -,stnB - chrX_9_22980001 chrX_22980001 RAL-304_75b 986 chrX 22996310 22996334 chrX 23003544 23003568 roo 6 7234 2.0 0.0 1.0 3.0 7258 chrX 22996310 intron,intron stnA -,stnB - chrX 22999939 intron,intron stnA -,stnB - chrX 23003568 intron,intron stnA -,stnB - chrX_6_22995001 chrX_22995001 RAL-304_75b