SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47463 47491 chr2L 52568 52596 jockey 12 5105 4.5 3.5 4.0 2.4 5133 chr2L 47463 intron Cda5 - chr2L 50030 intron Cda5 - chr2L 52596 intron Cda5 - chr2L_12_50001 chr2L_50001 RAL-301_75b 2 chr2L 127507 127522 chr2L 127599 127616 7 94 6.0 7.0 6.5 0.9 109 chr2L 127507 intron,intron CG11455 +,CG3164 - chr2L 127562 intron,intron CG11455 +,CG3164 - chr2L 127616 intron,intron CG11455 +,CG3164 - chr2L_7_125001 chr2L_125001 RAL-301_75b 3 chr2L 172034 172049 chr2L 172144 172159 10 110 2.5 2.5 2.5 2.9 125 chr2L 172034 intron spen + chr2L 172096 intron spen + chr2L 172159 intron spen + chr2L_10_170001 chr2L_170001 RAL-301_75b 4 chr2L 245548 245555 chr2L 245659 245666 5 111 5.5 3.5 4.5 0.9 118 chr2L 245548 intron kis - chr2L 245607 intron kis - chr2L 245666 intron kis - chr2L_5_245001 chr2L_245001 RAL-301_75b 5 chr2L 263306 263319 chr2L 263452 263465 4 146 3.0 5.0 4.0 0.8 159 chr2L 263306 intron,3` UTR CG3645 -,CG17075 - chr2L 263386 intron,3` UTR CG3645 -,CG17075 - chr2L 263465 intron,3` UTR CG3645 -,CG17075 - chr2L_4_260001 chr2L_260001 RAL-301_75b 6 chr2L 314126 314163 chr2L 314203 314240 6 77 3.0 4.5 3.8 1.2 114 chr2L 314126 intron Plc21C + chr2L 314183 intron Plc21C + chr2L 314240 intron Plc21C + chr2L_6_310001 chr2L_310001 RAL-301_75b 7 chr2L 315771 315801 chr2L 315862 315891 6 91 6.0 6.0 6.0 0.9 120 chr2L 315771 intron Plc21C + chr2L 315831 intron Plc21C + chr2L 315891 intron Plc21C + chr2L_6_315001 chr2L_315001 RAL-301_75b 8 chr2L 319908 319933 chr2L 319993 320018 9 85 6.0 8.5 7.2 1.1 110 chr2L 319908 intron Plc21C + chr2L 319963 intron Plc21C + chr2L 320018 intron Plc21C + chr2L_9_315001 chr2L_315001 RAL-301_75b 9 chr2L 325129 325154 chr2L 325206 325231 11 77 7.0 4.0 5.5 1.7 102 chr2L 325129 intron Plc21C + chr2L 325180 intron Plc21C + chr2L 325231 intron Plc21C + chr2L_11_325001 chr2L_325001 RAL-301_75b 10 chr2L 347885 347919 chr2L 355385 355419 blood 13 7500 2.5 2.5 2.5 3.7 7534 chr2L 347885 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355419 3` UTR Plc21C + chr2L_13_350001 chr2L_350001 RAL-301_75b 11 chr2L 396000 396029 chr2L 396079 396108 4 78 2.5 5.5 4.0 0.8 108 chr2L 396000 intergenic CR43718 + chr2L 396054 intergenic CR43718 + chr2L 396108 intergenic CR43718 +,CG4213 - chr2L_4_395001 chr2L_395001 RAL-301_75b 12 chr2L 630324 630334 chr2L 630416 630425 5 92 5.0 9.5 7.2 0.6 101 chr2L 630324 intergenic not near genes chr2L 630374 intergenic not near genes chr2L 630425 intergenic not near genes chr2L_5_630001 chr2L_630001 RAL-301_75b 13 chr2L 632707 632718 chr2L 632785 632795 5 79 4.0 4.0 4.0 1.0 88 chr2L 632707 intergenic not near genes chr2L 632751 intergenic not near genes chr2L 632795 intergenic not near genes chr2L_5_630001 chr2L_630001 RAL-301_75b 14 chr2L 668437 668450 chr2L 668517 668530 4 80 7.0 3.5 5.2 0.6 93 chr2L 668437 intron ds - chr2L 668484 intron ds - chr2L 668530 intron ds - chr2L_4_665001 chr2L_665001 RAL-301_75b 15 chr2L 686921 686952 chr2L 695961 695992 roo 10 9040 1.5 2.5 2.0 3.3 9071 chr2L 686921 intron ds - chr2L 691456 intron ds - chr2L 695992 intron ds - chr2L_10_690001 chr2L_690001 RAL-301_75b 16 chr2L 764569 764589 chr2L 764650 764670 12 85 2.5 2.0 2.2 3.8 101 chr2L 764569 intergenic not near genes chr2L 764620 intergenic not near genes chr2L 764670 intergenic not near genes chr2L_12_760001 chr2L_760001 RAL-301_75b 17 chr2L 770466 770489 chr2L 772246 772270 Bari1 9 1780 4.0 1.0 2.5 2.6 1804 chr2L 770466 intergenic not near genes chr2L 771368 intergenic not near genes chr2L 772270 intergenic CR44614 + chr2L_9_770001 chr2L_770001 RAL-301_75b 18 chr2L 793991 793996 chr2L 794127 794137 7 140 9.0 7.0 8.0 0.8 146 chr2L 793991 intergenic not near genes chr2L 794064 intergenic not near genes chr2L 794137 intergenic not near genes chr2L_7_790001 chr2L_790001 RAL-301_75b 19 chr2L 844940 844959 chr2L 845026 845046 4 86 6.5 9.0 7.8 0.5 106 chr2L 844940 intron drongo - chr2L 844993 intron drongo - chr2L 845046 intron drongo - chr2L_4_840001 chr2L_840001 RAL-301_75b 20 chr2L 850830 850836 chr2L 850914 850921 5 85 11.0 11.5 11.2 0.4 91 chr2L 850830 5` UTR,5` UTR drongo -,CR44060 + chr2L 850876 5` UTR,5` UTR drongo -,CR44060 + chr2L 850921 5` UTR,5` UTR drongo -,CR44060 + chr2L_5_850001 chr2L_850001 RAL-301_75b 21 chr2L 877846 877855 chr2L 877926 877935 6 80 5.0 2.0 3.5 1.3 89 chr2L 877846 3` UTR,exon CG15824 -,ninaA + chr2L 877890 3` UTR,intron CG15824 -,ninaA + chr2L 877935 3` UTR,intron CG15824 -,ninaA + chr2L_6_875001 chr2L_875001 RAL-301_75b 22 chr2L 922465 922495 chr2L 922546 922576 9 81 2.0 3.0 2.5 2.6 111 chr2L 922465 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922576 intergenic CG4341 + chr2L_9_920001 chr2L_920001 RAL-301_75b 23 chr2L 923521 923526 chr2L 923705 923711 5 185 19.0 15.0 17.0 0.3 190 chr2L 923521 intron CG4341 + chr2L 923616 intron CG4341 + chr2L 923711 intron CG4341 + chr2L_5_920001 chr2L_920001 RAL-301_75b 24 chr2L 931632 931669 chr2L 931711 931747 5 78 7.0 10.0 8.5 0.5 115 chr2L 931632 intron CG4341 + chr2L 931690 intron CG4341 + chr2L 931747 intron CG4341 + chr2L_5_930001 chr2L_930001 RAL-301_75b 25 chr2L 935383 935405 chr2L 935467 935489 7 84 0.5 3.0 1.8 2.5 106 chr2L 935383 intron CG4341 + chr2L 935436 intron CG4341 + chr2L 935489 intron CG4341 + chr2L_7_935001 chr2L_935001 RAL-301_75b 26 chr2L 955987 955990 chr2L 956080 956084 4 94 0.0 5.5 2.8 1.1 97 chr2L 955987 intron CG4341 + chr2L 956036 intron CG4341 + chr2L 956084 intron CG4341 + chr2L_4_955001 chr2L_955001 RAL-301_75b 27 chr2L 976882 976904 chr2L 984518 984540 roo 4 7636 4.0 1.5 2.8 1.1 7658 chr2L 976882 intergenic not near genes chr2L 980711 intergenic not near genes chr2L 984540 intergenic not near genes chr2L_4_980001 chr2L_980001 RAL-301_75b 28 chr2L 986084 986095 chr2L 986190 986201 4 106 1.5 5.5 3.5 0.9 117 chr2L 986084 intergenic not near genes chr2L 986142 intergenic not near genes chr2L 986201 intergenic not near genes chr2L_4_985001 chr2L_985001 RAL-301_75b 29 chr2L 989382 989407 chr2L 989469 989494 18 86 3.5 6.0 4.8 3.1 112 chr2L 989382 intron CR44801 - chr2L 989438 3` UTR CR44801 - chr2L 989494 3` UTR CR44801 - chr2L_18_985001 chr2L_985001 RAL-301_75b 30 chr2L 1192682 1192696 chr2L 1192785 1192799 8 103 4.0 5.0 4.5 1.5 117 chr2L 1192682 intron CG5001 + chr2L 1192740 intron CG5001 + chr2L 1192799 intron CG5001 + chr2L_8_1190001 chr2L_1190001 RAL-301_75b 31 chr2L 1220128 1220161 chr2L 1227594 1227626 blood 13 7466 2.0 0.5 1.2 5.9 7498 chr2L 1220128 intron CG42329 + chr2L 1223877 intron CG42329 + chr2L 1227626 intron CG42329 + chr2L_13_1220001 chr2L_1220001 RAL-301_75b 32 chr2L 1244416 1244431 chr2L 1244493 1244508 5 77 3.0 7.5 5.2 0.8 92 chr2L 1244416 intergenic not near genes chr2L 1244462 intergenic not near genes chr2L 1244508 intergenic not near genes chr2L_5_1240001 chr2L_1240001 RAL-301_75b 33 chr2L 1261151 1261260 chr2L 1261233 1261341 11 81 1.0 2.0 1.5 4.4 190 chr2L 1261151 intron robo3 + chr2L 1261246 intron robo3 + chr2L 1261341 intron robo3 + chr2L_11_1260001 chr2L_1260001 RAL-301_75b 34 chr2L 1291778 1291802 chr2L 1296221 1296245 7 4443 5.0 21.5 13.2 0.5 4467 chr2L 1291778 intron robo3 + chr2L 1294012 3` UTR robo3 + chr2L 1296245 3` UTR robo3 + chr2L_7_1290001 chr2L_1290001 RAL-301_75b 35 chr2L 1462944 1462975 chr2L 1463064 1463095 4 120 11.0 14.5 12.8 0.3 151 chr2L 1462944 intergenic not near genes chr2L 1463020 intergenic not near genes chr2L 1463095 intergenic not near genes chr2L_4_1460001 chr2L_1460001 RAL-301_75b 36 chr2L 1506600 1506629 chr2L 1506726 1506757 6 128 5.5 6.0 5.8 0.9 157 chr2L 1506600 intergenic not near genes chr2L 1506678 intergenic not near genes chr2L 1506757 intergenic not near genes chr2L_6_1505001 chr2L_1505001 RAL-301_75b 37 chr2L 1512924 1512946 chr2L 1513010 1513032 15 86 11.0 7.0 9.0 1.5 108 chr2L 1512924 intergenic not near genes chr2L 1512978 intergenic not near genes chr2L 1513032 intergenic not near genes chr2L_15_1510001 chr2L_1510001 RAL-301_75b 38 chr2L 1570709 1570722 chr2L 1573583 1573593 F-element 7 2872 3.0 5.5 4.2 1.3 2884 chr2L 1570709 intron haf + chr2L 1572151 intron haf + chr2L 1573593 intron haf + chr2L_7_1570001 chr2L_1570001 RAL-301_75b 39 chr2L 1591875 1591889 chr2L 1591959 1591973 7 83 0.5 4.5 2.5 2.0 98 chr2L 1591875 intron haf + chr2L 1591924 intron haf + chr2L 1591973 intron haf + chr2L_7_1590001 chr2L_1590001 RAL-301_75b 40 chr2L 1620274 1620294 chr2L 1620350 1620370 10 76 1.0 3.5 2.2 3.1 96 chr2L 1620274 3` UTR CR44603 - chr2L 1620322 3` UTR CR44603 - chr2L 1620370 3` UTR CR44603 - chr2L_10_1620001 chr2L_1620001 RAL-301_75b 41 chr2L 1678979 1679000 chr2L 1686444 1686465 blood 11 7465 2.0 3.0 2.5 3.1 7486 chr2L 1678979 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686465 intron chinmo + chr2L_11_1680001 chr2L_1680001 RAL-301_75b 42 chr2L 1711356 1711387 chr2L 1711678 1711711 mdg3 10 323 4.0 4.0 4.0 2.0 355 chr2L 1711356 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711711 3` UTR frtz - chr2L_10_1710001 chr2L_1710001 RAL-301_75b 43 chr2L 1721825 1721851 chr2L 1721909 1721935 4 84 9.5 13.0 11.2 0.3 110 chr2L 1721825 intron Rim2 - chr2L 1721880 intron Rim2 - chr2L 1721935 intron Rim2 - chr2L_4_1720001 chr2L_1720001 RAL-301_75b 44 chr2L 1761219 1761236 chr2L 1761297 1761314 4 78 3.0 3.5 3.2 1.0 95 chr2L 1761219 intergenic not near genes chr2L 1761266 intergenic not near genes chr2L 1761314 intergenic not near genes chr2L_4_1760001 chr2L_1760001 RAL-301_75b 45 chr2L 1901505 1901528 chr2L 1901577 1901603 5 75 4.0 4.5 4.2 1.0 98 chr2L 1901505 intron CG7337 + chr2L 1901554 intron CG7337 + chr2L 1901603 intron CG7337 + chr2L_5_1900001 chr2L_1900001 RAL-301_75b 46 chr2L 1910549 1910569 chr2L 1910638 1910658 5 88 12.0 11.5 11.8 0.4 109 chr2L 1910549 intron CG7337 + chr2L 1910604 intron CG7337 + chr2L 1910658 intron CG7337 + chr2L_5_1910001 chr2L_1910001 RAL-301_75b 47 chr2L 2014068 2014072 chr2L 2014163 2014167 6 94 2.5 3.5 3.0 1.5 99 chr2L 2014068 intron CG4238 + chr2L 2014118 intron CG4238 + chr2L 2014167 intron CG4238 + chr2L_6_2010001 chr2L_2010001 RAL-301_75b 48 chr2L 2100376 2100402 chr2L 2109527 2109553 roo 9 9150 4.0 5.0 4.5 1.6 9177 chr2L 2100376 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109553 intron dpr3 - chr2L_9_2100001 chr2L_2100001 RAL-301_75b 49 chr2L 2112137 2112141 chr2L 2119799 2119803 opus 4 7662 0.0 3.5 1.8 1.4 7666 chr2L 2112137 intergenic not near genes chr2L 2115970 intergenic not near genes chr2L 2119803 intergenic not near genes chr2L_4_2115001 chr2L_2115001 RAL-301_75b 50 chr2L 2260804 2260832 chr2L 2260887 2260918 7 85 5.5 4.5 5.0 1.2 114 chr2L 2260804 intergenic not near genes chr2L 2260861 intergenic not near genes chr2L 2260918 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-301_75b 51 chr2L 2262307 2262338 chr2L 2262384 2262415 11 77 2.0 0.5 1.2 5.0 108 chr2L 2262307 intergenic not near genes chr2L 2262361 intergenic not near genes chr2L 2262415 intergenic not near genes chr2L_11_2260001 chr2L_2260001 RAL-301_75b 52 chr2L 2311071 2311092 chr2L 2311167 2311185 16 95 0.5 0.0 0.2 13.3 114 chr2L 2311071 intron CG9967 - chr2L 2311128 intron CG9967 - chr2L 2311185 intron CG9967 - chr2L_16_2310001 chr2L_2310001 RAL-301_75b 53 chr2L 2330872 2330898 chr2L 2330961 2330986 8 89 7.0 4.5 5.8 1.2 114 chr2L 2330872 intron,intron CG9967 -,eys + chr2L 2330929 intron,intron CG9967 -,eys + chr2L 2330986 intron,intron CG9967 -,eys + chr2L_8_2330001 chr2L_2330001 RAL-301_75b 54 chr2L 2541457 2541478 chr2L 2541540 2541561 8 83 7.5 8.0 7.8 0.9 104 chr2L 2541457 intergenic not near genes chr2L 2541509 intergenic not near genes chr2L 2541561 intergenic not near genes chr2L_8_2540001 chr2L_2540001 RAL-301_75b 55 chr2L 2544539 2544557 chr2L 2544638 2544656 7 99 1.5 2.5 2.0 2.3 117 chr2L 2544539 intergenic not near genes chr2L 2544598 intergenic not near genes chr2L 2544656 intergenic not near genes chr2L_7_2540001 chr2L_2540001 RAL-301_75b 56 chr2L 2552739 2552773 chr2L 2552819 2552853 4 80 7.0 7.0 7.0 0.5 114 chr2L 2552739 exon CG3515 - chr2L 2552796 5` UTR CG3515 - chr2L 2552853 intergenic CG3515 - chr2L_4_2550001 chr2L_2550001 RAL-301_75b 57 chr2L 2661193 2661229 chr2L 2663031 2663067 I-element 5 1837 3.5 0.0 1.8 1.8 1874 chr2L 2661193 intergenic not near genes chr2L 2662130 intergenic not near genes chr2L 2663067 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-301_75b 58 chr2L 2667624 2667653 chr2L 2667703 2667732 11 79 3.5 6.5 5.0 1.8 108 chr2L 2667624 intergenic not near genes chr2L 2667678 intergenic not near genes chr2L 2667732 intergenic not near genes chr2L_11_2665001 chr2L_2665001 RAL-301_75b 59 chr2L 2734516 2734517 chr2L 2734590 2734593 5 76 8.5 7.0 7.8 0.6 77 chr2L 2734516 intron CG31689 + chr2L 2734554 intron CG31689 + chr2L 2734593 intron CG31689 + chr2L_5_2730001 chr2L_2730001 RAL-301_75b 60 chr2L 2772615 2772626 chr2L 2779196 2779207 297 4 6582 2.5 1.0 1.8 1.4 6592 chr2L 2772615 3` UTR Syt1 - chr2L 2775911 intron Syt1 - chr2L 2779207 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 RAL-301_75b 61 chr2L 2885373 2885387 chr2L 2885450 2885464 4 77 12.0 12.5 12.2 0.3 91 chr2L 2885373 intron NTPase - chr2L 2885418 intron NTPase - chr2L 2885464 intron NTPase - chr2L_4_2885001 chr2L_2885001 RAL-301_75b 62 chr2L 2899972 2899994 chr2L 2900118 2900140 9 146 3.5 8.0 5.8 1.3 168 chr2L 2899972 intron lilli + chr2L 2900056 intron lilli + chr2L 2900140 intron lilli + chr2L_9_2900001 chr2L_2900001 RAL-301_75b 63 chr2L 2925691 2925710 chr2L 2925782 2925801 5 91 4.0 2.5 3.2 1.2 110 chr2L 2925691 intron lilli + chr2L 2925746 intron lilli + chr2L 2925801 intron lilli + chr2L_5_2925001 chr2L_2925001 RAL-301_75b 64 chr2L 2933308 2933325 chr2L 2935485 2935502 pogo 7 2177 2.0 2.5 2.2 2.2 2194 chr2L 2933308 intron lilli + chr2L 2934405 intron lilli + chr2L 2935502 intron lilli + chr2L_7_2930001 chr2L_2930001 RAL-301_75b 65 chr2L 2937419 2937454 chr2L 2937495 2937528 14 77 0.5 0.0 0.2 11.7 109 chr2L 2937419 intron lilli + chr2L 2937474 intron lilli + chr2L 2937528 intron lilli + chr2L_14_2935001 chr2L_2935001 RAL-301_75b 66 chr2L 3046429 3046439 chr2L 3046576 3046587 5 147 6.0 0.5 3.2 1.2 158 chr2L 3046429 intron v(2)k05816 + chr2L 3046508 intron v(2)k05816 + chr2L 3046587 intron v(2)k05816 + chr2L_5_3045001 chr2L_3045001 RAL-301_75b 67 chr2L 3073046 3073062 chr2L 3078236 3078263 copia 13 5201 2.5 8.5 5.5 2.0 5217 chr2L 3073046 intron toc - chr2L 3075654 intron toc - chr2L 3078263 intron toc - chr2L_13_3075001 chr2L_3075001 RAL-301_75b 68 chr2L 3100160 3100177 chr2L 3100249 3100264 9 89 4.5 9.0 6.8 1.2 104 chr2L 3100160 intron toc - chr2L 3100212 intron toc - chr2L 3100264 intron toc - chr2L_9_3100001 chr2L_3100001 RAL-301_75b 69 chr2L 3107487 3107507 chr2L 3107588 3107608 5 101 6.5 5.5 6.0 0.7 121 chr2L 3107487 intron toc - chr2L 3107548 intron toc - chr2L 3107608 intron toc - chr2L_5_3105001 chr2L_3105001 RAL-301_75b 70 chr2L 3142014 3142029 chr2L 3142360 3142378 4 348 5.0 16.0 10.5 0.3 364 chr2L 3142014 intron toc - chr2L 3142196 intron toc - chr2L 3142378 intron toc - chr2L_4_3140001 chr2L_3140001 RAL-301_75b 71 chr2L 3147278 3147304 chr2L 3147354 3147381 6 77 4.0 4.0 4.0 1.2 103 chr2L 3147278 3` UTR Mad - chr2L 3147330 3` UTR Mad - chr2L 3147381 3` UTR Mad - chr2L_6_3145001 chr2L_3145001 RAL-301_75b 72 chr2L 3181301 3181303 chr2L 3181387 3181388 4 86 3.0 2.5 2.8 1.1 87 chr2L 3181301 intron CG34393 - chr2L 3181344 intron CG34393 - chr2L 3181388 intron CG34393 - chr2L_4_3180001 chr2L_3180001 RAL-301_75b 73 chr2L 3192214 3192228 chr2L 3192323 3192339 8 111 5.0 1.0 3.0 2.0 125 chr2L 3192214 exon CG34393 - chr2L 3192276 intron CG34393 - chr2L 3192339 intron CG34393 - chr2L_8_3190001 chr2L_3190001 RAL-301_75b 74 chr2L 3201119 3201147 chr2L 3201202 3201230 8 83 10.5 15.0 12.8 0.6 111 chr2L 3201119 intergenic not near genes chr2L 3201174 intergenic not near genes chr2L 3201230 intergenic not near genes chr2L_8_3200001 chr2L_3200001 RAL-301_75b 75 chr2L 3233636 3233660 chr2L 3233787 3233811 9 150 2.5 11.5 7.0 1.1 175 chr2L 3233636 intergenic not near genes chr2L 3233724 intergenic not near genes chr2L 3233811 intergenic not near genes chr2L_9_3230001 chr2L_3230001 RAL-301_75b 76 chr2L 3271153 3271182 chr2L 3271275 3271304 10 122 0.5 4.5 2.5 2.9 151 chr2L 3271153 exon CG3347 + chr2L 3271228 exon CG3347 + chr2L 3271304 exon CG3347 + chr2L_10_3270001 chr2L_3270001 RAL-301_75b 77 chr2L 3291240 3291267 chr2L 3291320 3291346 7 80 4.5 1.5 3.0 1.8 106 chr2L 3291240 intergenic CG9664 - chr2L 3291293 3` UTR CG9664 - chr2L 3291346 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-301_75b 78 chr2L 3314544 3314565 chr2L 3314625 3314646 10 81 8.5 5.0 6.8 1.3 102 chr2L 3314544 intron CG3277 + chr2L 3314595 intron CG3277 + chr2L 3314646 intron CG3277 + chr2L_10_3310001 chr2L_3310001 RAL-301_75b 79 chr2L 3330173 3330176 chr2L 3330272 3330275 5 99 4.5 4.5 4.5 0.9 102 chr2L 3330173 intergenic CG33282 + chr2L 3330224 intergenic CG33282 + chr2L 3330275 intergenic CG33282 + chr2L_5_3330001 chr2L_3330001 RAL-301_75b 80 chr2L 3367025 3367035 chr2L 3367175 3367184 5 149 8.0 6.5 7.2 0.6 159 chr2L 3367025 intron CG34394 - chr2L 3367104 intron CG34394 - chr2L 3367184 intron CG34394 - chr2L_5_3365001 chr2L_3365001 RAL-301_75b 81 chr2L 3388599 3388630 chr2L 3388840 3388871 pogo 13 240 2.0 4.5 3.2 3.1 272 chr2L 3388599 intergenic CG42460 - chr2L 3388735 intergenic CG42460 - chr2L 3388871 intergenic CG42460 -,CR44791 + chr2L_13_3385001 chr2L_3385001 RAL-301_75b 82 chr2L 3426410 3426439 chr2L 3426522 3426552 6 113 5.5 6.0 5.8 0.9 142 chr2L 3426410 intron pgant2 - chr2L 3426481 intron pgant2 - chr2L 3426552 5` UTR pgant2 - chr2L_6_3425001 chr2L_3425001 RAL-301_75b 83 chr2L 3439424 3439445 chr2L 3439509 3439532 15 87 7.5 7.5 7.5 1.8 108 chr2L 3439424 intergenic not near genes chr2L 3439478 intergenic not near genes chr2L 3439532 intergenic not near genes chr2L_15_3435001 chr2L_3435001 RAL-301_75b 84 chr2L 3648186 3648217 chr2L 3648265 3648295 7 79 3.0 3.5 3.2 1.7 109 chr2L 3648186 intron for - chr2L 3648240 intron for - chr2L 3648295 intron for - chr2L_7_3645001 chr2L_3645001 RAL-301_75b 85 chr2L 3649787 3649798 chr2L 3654988 3655000 copia 4 5202 0.0 0.0 0.0 4.0 5213 chr2L 3649787 intron for - chr2L 3652394 intron for - chr2L 3655000 intron for - chr2L_4_3650001 chr2L_3650001 RAL-301_75b 86 chr2L 3663306 3663338 chr2L 3663385 3663417 15 79 4.0 3.0 3.5 3.3 111 chr2L 3663306 5` UTR CG34340 + chr2L 3663362 intron CG34340 + chr2L 3663417 intron CG34340 + chr2L_15_3660001 chr2L_3660001 RAL-301_75b 87 chr2L 3686038 3686051 chr2L 3686126 3686139 7 88 0.0 1.5 0.8 3.9 101 chr2L 3686038 intron CG34340 + chr2L 3686088 intron CG34340 + chr2L 3686139 intron CG34340 + chr2L_7_3685001 chr2L_3685001 RAL-301_75b 88 chr2L 3881780 3881791 chr2L 3881866 3881877 8 86 8.0 15.0 11.5 0.6 97 chr2L 3881780 intron capu - chr2L 3881828 intron capu - chr2L 3881877 intron capu - chr2L_8_3880001 chr2L_3880001 RAL-301_75b 89 chr2L 3935914 3935946 chr2L 3936002 3936035 13 89 5.0 5.0 5.0 2.2 121 chr2L 3935914 intron fred - chr2L 3935974 intron fred - chr2L 3936035 intron fred - chr2L_13_3935001 chr2L_3935001 RAL-301_75b 90 chr2L 3936625 3936632 chr2L 3936703 3936709 4 78 0.5 5.5 3.0 1.0 84 chr2L 3936625 intron fred - chr2L 3936667 intron fred - chr2L 3936709 intron fred - chr2L_4_3935001 chr2L_3935001 RAL-301_75b 91 chr2L 3943800 3943801 chr2L 3943889 3943892 5 90 8.0 4.5 6.2 0.7 92 chr2L 3943800 intron fred - chr2L 3943846 intron fred - chr2L 3943892 intron fred - chr2L_5_3940001 chr2L_3940001 RAL-301_75b 92 chr2L 4008279 4008299 chr2L 4008363 4008384 8 85 7.5 11.5 9.5 0.8 105 chr2L 4008279 intergenic CG43773 +,CG43774 + chr2L 4008332 intergenic CG43774 +,CG43773 + chr2L 4008384 intergenic CG43774 +,CG43773 + chr2L_8_4005001 chr2L_4005001 RAL-301_75b 93 chr2L 4066045 4066063 chr2L 4068870 4068888 Juan 7 2825 2.0 5.5 3.8 1.5 2843 chr2L 4066045 intron ed + chr2L 4067466 intron ed + chr2L 4068888 intron ed + chr2L_7_4065001 chr2L_4065001 RAL-301_75b 94 chr2L 4074191 4074192 chr2L 4074284 4074284 4 93 10.5 7.5 9.0 0.4 93 chr2L 4074191 intron ed + chr2L 4074238 intron ed + chr2L 4074284 intron,3` UTR ed +,CR44984 - chr2L_4_4070001 chr2L_4070001 RAL-301_75b 95 chr2L 4124281 4124362 chr2L 4124360 4124455 4 96 4.0 4.0 4.0 0.8 174 chr2L 4124281 intergenic Sr-CI + chr2L 4124368 intergenic Sr-CI + chr2L 4124455 intergenic Sr-CI + chr2L_4_4120001 chr2L_4120001 RAL-301_75b 96 chr2L 4131059 4131082 chr2L 4131455 4131481 8 398 3.0 8.5 5.8 1.2 422 chr2L 4131059 intergenic not near genes chr2L 4131270 intergenic not near genes chr2L 4131481 intergenic not near genes chr2L_8_4130001 chr2L_4130001 RAL-301_75b 97 chr2L 4166378 4166411 chr2L 4166458 4166494 12 83 2.0 5.0 3.5 2.7 116 chr2L 4166378 intergenic Or24a - chr2L 4166436 intergenic Or24a - chr2L 4166494 intergenic Or24a - chr2L_12_4165001 chr2L_4165001 RAL-301_75b 98 chr2L 4170945 4170960 chr2L 4171112 4171129 8 168 2.5 7.5 5.0 1.3 184 chr2L 4170945 intergenic not near genes chr2L 4171037 intergenic not near genes chr2L 4171129 intergenic not near genes chr2L_8_4170001 chr2L_4170001 RAL-301_75b 99 chr2L 4184497 4184508 chr2L 4184816 4184827 8 318 0.0 9.0 4.5 1.5 330 chr2L 4184497 intergenic not near genes chr2L 4184662 intergenic not near genes chr2L 4184827 intergenic not near genes chr2L_8_4180001 chr2L_4180001 RAL-301_75b 100 chr2L 4218345 4218351 chr2L 4218422 4218428 4 78 2.5 0.5 1.5 1.6 83 chr2L 4218345 intron ft - chr2L 4218386 intron ft - chr2L 4218428 intron ft - chr2L_4_4215001 chr2L_4215001 RAL-301_75b 101 chr2L 4242603 4242629 chr2L 4242682 4242708 5 79 5.0 3.5 4.2 1.0 105 chr2L 4242603 intergenic CR44058 + chr2L 4242656 intergenic CR44058 + chr2L 4242708 intergenic CR44058 + chr2L_5_4240001 chr2L_4240001 RAL-301_75b 102 chr2L 4317879 4317910 chr2L 4317957 4317988 8 78 7.0 7.0 7.0 1.0 109 chr2L 4317879 intron tutl + chr2L 4317934 intron tutl + chr2L 4317988 intron tutl + chr2L_8_4315001 chr2L_4315001 RAL-301_75b 103 chr2L 4351477 4351502 chr2L 4351551 4351578 13 76 1.5 3.5 2.5 3.7 101 chr2L 4351477 intergenic CR44700 + chr2L 4351528 intergenic CR44700 + chr2L 4351578 intergenic CR44700 + chr2L_13_4350001 chr2L_4350001 RAL-301_75b 104 chr2L 4439004 4439035 chr2L 4439090 4439120 16 86 6.0 4.5 5.2 2.6 116 chr2L 4439004 intron CG15431 - chr2L 4439062 intron CG15431 - chr2L 4439120 5` UTR CG15431 - chr2L_16_4435001 chr2L_4435001 RAL-301_75b 105 chr2L 4477140 4477154 chr2L 4477333 4477347 7 193 13.5 10.5 12.0 0.5 207 chr2L 4477140 intergenic ine -,dp - chr2L 4477244 intergenic dp -,ine - chr2L 4477347 intergenic dp -,ine - chr2L_7_4475001 chr2L_4475001 RAL-301_75b 106 chr2L 4595862 4595885 chr2L 4595952 4595975 6 90 7.0 1.5 4.2 1.2 113 chr2L 4595862 intron dp - chr2L 4595918 intron dp - chr2L 4595975 intron dp - chr2L_6_4595001 chr2L_4595001 RAL-301_75b 107 chr2L 4601711 4601735 chr2L 4609152 4609174 mdg1 11 7441 1.0 2.5 1.8 3.9 7463 chr2L 4601711 intron dp - chr2L 4605442 intron dp - chr2L 4609174 intron dp - chr2L_11_4605001 chr2L_4605001 RAL-301_75b 108 chr2L 4672078 4672109 chr2L 4672155 4672186 12 76 3.5 2.0 2.8 3.2 108 chr2L 4672078 intergenic not near genes chr2L 4672132 intergenic not near genes chr2L 4672186 intergenic not near genes chr2L_12_4670001 chr2L_4670001 RAL-301_75b 109 chr2L 4693412 4693418 chr2L 4693577 4693584 5 166 1.0 2.5 1.8 1.8 172 chr2L 4693412 intergenic not near genes chr2L 4693498 intergenic not near genes chr2L 4693584 intergenic not near genes chr2L_5_4690001 chr2L_4690001 RAL-301_75b 110 chr2L 4748706 4748720 chr2L 4748785 4748799 4 78 16.5 15.5 16.0 0.2 93 chr2L 4748706 intron CG15630 - chr2L 4748752 intron CG15630 - chr2L 4748799 intron CG15630 - chr2L_4_4745001 chr2L_4745001 RAL-301_75b 111 chr2L 4759492 4759509 chr2L 4759580 4759598 6 89 14.0 11.5 12.8 0.4 106 chr2L 4759492 intron CG15630 - chr2L 4759545 intron CG15630 - chr2L 4759598 intron CG15630 - chr2L_6_4755001 chr2L_4755001 RAL-301_75b 112 chr2L 4770114 4770138 chr2L 4770196 4770221 11 83 4.5 2.0 3.2 2.6 107 chr2L 4770114 intron CG15630 - chr2L 4770168 intron CG15630 - chr2L 4770221 intron CG15630 - chr2L_11_4770001 chr2L_4770001 RAL-301_75b 113 chr2L 4784060 4784067 chr2L 4784160 4784169 5 101 3.0 9.0 6.0 0.7 109 chr2L 4784060 intron CG15630 - chr2L 4784114 intron CG15630 - chr2L 4784169 intron CG15630 - chr2L_5_4780001 chr2L_4780001 RAL-301_75b 114 chr2L 4918170 4918181 chr2L 4923243 4923252 jockey 4 5071 1.0 0.5 0.8 2.2 5082 chr2L 4918170 intron hoe1 - chr2L 4920711 intron hoe1 - chr2L 4923252 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-301_75b 115 chr2L 4953519 4953542 chr2L 4953757 4953780 pogo 4 240 0.0 1.5 0.8 2.2 261 chr2L 4953519 intergenic Jon25Bii - chr2L 4953650 intergenic not near genes chr2L 4953780 intergenic Jon25Bi - chr2L_4_4950001 chr2L_4950001 RAL-301_75b 116 chr2L 4996093 4996111 chr2L 4996170 4996188 8 77 7.0 8.5 7.8 0.9 95 chr2L 4996093 intron Rtnl1 - chr2L 4996140 intron Rtnl1 - chr2L 4996188 intron Rtnl1 - chr2L_8_4995001 chr2L_4995001 RAL-301_75b 117 chr2L 4998124 4998142 chr2L 4998237 4998255 8 112 2.0 6.0 4.0 1.6 131 chr2L 4998124 intron Rtnl1 - chr2L 4998190 intron Rtnl1 - chr2L 4998255 intron Rtnl1 - chr2L_8_4995001 chr2L_4995001 RAL-301_75b 118 chr2L 5120976 5121000 chr2L 5121070 5121093 17 94 3.0 2.0 2.5 4.9 117 chr2L 5120976 intron Msp300 + chr2L 5121034 intron Msp300 + chr2L 5121093 intron Msp300 + chr2L_17_5120001 chr2L_5120001 RAL-301_75b 119 chr2L 5339047 5339063 chr2L 5339131 5339147 7 84 14.5 5.5 10.0 0.6 100 chr2L 5339047 intergenic CG12512 - chr2L 5339097 intergenic CG12512 - chr2L 5339147 3` UTR CG12512 - chr2L_7_5335001 chr2L_5335001 RAL-301_75b 120 chr2L 5398014 5398039 chr2L 5398094 5398119 4 80 3.0 5.0 4.0 0.8 105 chr2L 5398014 intergenic not near genes chr2L 5398066 intergenic not near genes chr2L 5398119 intergenic not near genes chr2L_4_5395001 chr2L_5395001 RAL-301_75b 121 chr2L 5500054 5500080 chr2L 5500140 5500166 7 85 4.5 6.0 5.2 1.1 112 chr2L 5500054 intergenic not near genes chr2L 5500110 intergenic not near genes chr2L 5500166 intergenic not near genes chr2L_7_5500001 chr2L_5500001 RAL-301_75b 122 chr2L 5516665 5516687 chr2L 5516744 5516765 6 79 8.0 7.0 7.5 0.7 100 chr2L 5516665 intergenic not near genes chr2L 5516715 intergenic not near genes chr2L 5516765 intergenic not near genes chr2L_6_5515001 chr2L_5515001 RAL-301_75b 123 chr2L 5573701 5573702 chr2L 5573775 5573778 5 76 5.5 10.0 7.8 0.6 77 chr2L 5573701 intergenic not near genes chr2L 5573740 intergenic not near genes chr2L 5573778 intergenic not near genes chr2L_5_5570001 chr2L_5570001 RAL-301_75b 124 chr2L 5668601 5668612 chr2L 5668679 5668688 7 77 9.5 8.5 9.0 0.7 87 chr2L 5668601 intron Hsp60C + chr2L 5668644 intron Hsp60C + chr2L 5668688 intron Hsp60C + chr2L_7_5665001 chr2L_5665001 RAL-301_75b 125 chr2L 5774597 5774605 chr2L 5774811 5774819 6 213 3.0 6.0 4.5 1.1 222 chr2L 5774597 intron CG9171 - chr2L 5774708 intron CG9171 - chr2L 5774819 intron CG9171 - chr2L_6_5770001 chr2L_5770001 RAL-301_75b 126 chr2L 5784949 5784985 chr2L 5785032 5785068 6 83 0.5 6.0 3.2 1.4 119 chr2L 5784949 intron CG9171 - chr2L 5785008 intron CG9171 - chr2L 5785068 intron CG9171 - chr2L_6_5785001 chr2L_5785001 RAL-301_75b 127 chr2L 5822497 5822505 chr2L 5824016 5824024 8 1519 11.0 4.0 7.5 0.9 1527 chr2L 5822497 intergenic not near genes chr2L 5823260 intergenic not near genes chr2L 5824024 5` UTR TrissinR + chr2L_8_5820001 chr2L_5820001 RAL-301_75b 128 chr2L 5827722 5827737 chr2L 5836730 5836745 roo 7 9008 6.5 7.0 6.8 0.9 9023 chr2L 5827722 intron TrissinR + chr2L 5832234 intron TrissinR + chr2L 5836745 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-301_75b 129 chr2L 5883164 5883170 chr2L 5883244 5883250 5 80 0.0 9.0 4.5 0.9 86 chr2L 5883164 intergenic not near genes chr2L 5883207 intergenic not near genes chr2L 5883250 intergenic CG44574 + chr2L_5_5880001 chr2L_5880001 RAL-301_75b 130 chr2L 5976953 5976967 chr2L 5977038 5977053 6 86 4.0 6.0 5.0 1.0 100 chr2L 5976953 intron chic - chr2L 5977003 intron chic - chr2L 5977053 intron chic - chr2L_6_5975001 chr2L_5975001 RAL-301_75b 131 chr2L 5989032 5989064 chr2L 5989108 5989140 5 76 7.0 7.5 7.2 0.6 108 chr2L 5989032 intergenic ifc +,lid - chr2L 5989086 intergenic ifc +,lid - chr2L 5989140 intergenic lid -,ifc + chr2L_5_5985001 chr2L_5985001 RAL-301_75b 132 chr2L 6011363 6011382 chr2L 6011501 6011522 5 140 5.5 4.0 4.8 0.9 159 chr2L 6011363 intron CG9098 - chr2L 6011442 intron CG9098 - chr2L 6011522 intron CG9098 - chr2L_5_6010001 chr2L_6010001 RAL-301_75b 133 chr2L 6101762 6101795 chr2L 6101847 6101880 12 85 2.5 6.0 4.2 2.3 118 chr2L 6101762 5` UTR stai + chr2L 6101821 intron stai + chr2L 6101880 intron stai + chr2L_12_6100001 chr2L_6100001 RAL-301_75b 134 chr2L 6103223 6103249 chr2L 6103300 6103323 5 76 2.5 4.5 3.5 1.1 100 chr2L 6103223 intron stai + chr2L 6103273 intron stai + chr2L 6103323 intron stai + chr2L_5_6100001 chr2L_6100001 RAL-301_75b 135 chr2L 6242858 6242885 chr2L 6242942 6242968 6 84 3.0 4.0 3.5 1.3 110 chr2L 6242858 intergenic not near genes chr2L 6242913 intergenic not near genes chr2L 6242968 intergenic not near genes chr2L_6_6240001 chr2L_6240001 RAL-301_75b 136 chr2L 6283968 6283978 chr2L 6284079 6284089 6 111 1.0 2.0 1.5 2.4 121 chr2L 6283968 intron Ddr + chr2L 6284028 intron Ddr + chr2L 6284089 intron Ddr + chr2L_6_6280001 chr2L_6280001 RAL-301_75b 137 chr2L 6318734 6318744 chr2L 6318888 6318896 4 153 3.5 2.5 3.0 1.0 162 chr2L 6318734 intron Ddr + chr2L 6318815 intron Ddr + chr2L 6318896 intron Ddr + chr2L_4_6315001 chr2L_6315001 RAL-301_75b 138 chr2L 6363160 6363183 chr2L 6366078 6366104 Burdock 12 2922 1.5 1.5 1.5 4.8 2944 chr2L 6363160 intergenic not near genes chr2L 6364632 intergenic not near genes chr2L 6366104 intergenic not near genes chr2L_12_6360001 chr2L_6360001 RAL-301_75b 139 chr2L 6426854 6426881 chr2L 6445114 6445137 roo 9 18260 7.0 5.5 6.2 1.2 18283 chr2L 6426854 3` UTR CG9527 - chr2L 6435996 intron CG9527 - chr2L 6445137 exon CG9527 - chr2L_9_6435001 chr2L_6435001 RAL-301_75b 140 chr2L 6590091 6590125 chr2L 6590169 6590203 5 77 11.5 10.5 11.0 0.4 112 chr2L 6590091 intron CG11319 - chr2L 6590147 intron CG11319 - chr2L 6590203 intron CG11319 - chr2L_5_6590001 chr2L_6590001 RAL-301_75b 141 chr2L 6723682 6723708 chr2L 6723769 6723795 11 87 10.0 9.5 9.8 1.0 113 chr2L 6723682 intergenic Liprin-alpha +,homer - chr2L 6723738 intergenic Liprin-alpha +,homer - chr2L 6723795 intergenic Liprin-alpha +,homer - chr2L_11_6720001 chr2L_6720001 RAL-301_75b 142 chr2L 6799540 6799564 chr2L 6799627 6799652 5 88 3.0 3.0 3.0 1.2 112 chr2L 6799540 5` UTR CR43610 + chr2L 6799596 5` UTR CR43610 + chr2L 6799652 intergenic CR43610 +,CG17376 - chr2L_5_6795001 chr2L_6795001 RAL-301_75b 143 chr2L 6874696 6874712 chr2L 6874777 6874793 7 81 6.0 7.0 6.5 0.9 97 chr2L 6874696 intergenic Nlg2 +,CR44914 + chr2L 6874744 intergenic Nlg2 +,CR44914 + chr2L 6874793 intergenic Nlg2 +,CR44914 + chr2L_7_6870001 chr2L_6870001 RAL-301_75b 144 chr2L 6883746 6883774 chr2L 6883832 6883860 7 85 3.5 4.5 4.0 1.4 114 chr2L 6883746 intron Nlg2 + chr2L 6883803 intron Nlg2 + chr2L 6883860 intron Nlg2 + chr2L_7_6880001 chr2L_6880001 RAL-301_75b 145 chr2L 7107582 7107602 chr2L 7107672 7107692 5 90 2.5 11.5 7.0 0.6 110 chr2L 7107582 intron Pvf3 - chr2L 7107637 intron Pvf3 - chr2L 7107692 intron Pvf3 - chr2L_5_7105001 chr2L_7105001 RAL-301_75b 146 chr2L 7111775 7111788 chr2L 7111860 7111873 6 85 0.0 0.0 0.0 6.0 98 chr2L 7111775 intron Pvf3 - chr2L 7111824 intron Pvf3 - chr2L 7111873 intron Pvf3 - chr2L_6_7110001 chr2L_7110001 RAL-301_75b 147 chr2L 7125790 7125805 chr2L 7125906 7125921 5 115 7.5 5.5 6.5 0.7 131 chr2L 7125790 intron Pvf3 - chr2L 7125856 intron Pvf3 - chr2L 7125921 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-301_75b 148 chr2L 7335205 7335230 chr2L 7335302 7335327 6 97 2.0 5.0 3.5 1.3 122 chr2L 7335205 intron Wnt6 + chr2L 7335266 intron Wnt6 + chr2L 7335327 intron Wnt6 + chr2L_6_7335001 chr2L_7335001 RAL-301_75b 149 chr2L 7343326 7343356 chr2L 7350442 7350472 roo 9 7116 3.5 1.5 2.5 2.6 7146 chr2L 7343326 intron Wnt6 + chr2L 7346899 intron Wnt6 + chr2L 7350472 intron Wnt6 + chr2L_9_7345001 chr2L_7345001 RAL-301_75b 150 chr2L 7436199 7436221 chr2L 7436293 7436313 9 92 0.5 2.0 1.2 4.1 114 chr2L 7436199 intergenic not near genes chr2L 7436256 intergenic not near genes chr2L 7436313 intergenic not near genes chr2L_9_7435001 chr2L_7435001 RAL-301_75b 151 chr2L 7513769 7513778 chr2L 7513853 7513859 7 84 2.5 5.0 3.8 1.5 90 chr2L 7513769 intron RapGAP1 - chr2L 7513814 intron RapGAP1 - chr2L 7513859 intron RapGAP1 - chr2L_7_7510001 chr2L_7510001 RAL-301_75b 152 chr2L 7518562 7518593 chr2L 7518646 7518677 8 83 7.0 8.5 7.8 0.9 115 chr2L 7518562 intron RapGAP1 - chr2L 7518620 intron RapGAP1 - chr2L 7518677 intron RapGAP1 - chr2L_8_7515001 chr2L_7515001 RAL-301_75b 153 chr2L 7520693 7520705 chr2L 7520813 7520825 4 120 5.0 1.0 3.0 1.0 132 chr2L 7520693 intron RapGAP1 - chr2L 7520759 intron RapGAP1 - chr2L 7520825 intron RapGAP1 - chr2L_4_7520001 chr2L_7520001 RAL-301_75b 154 chr2L 7579889 7579920 chr2L 7579971 7580002 18 82 7.5 11.5 9.5 1.7 113 chr2L 7579889 intergenic not near genes chr2L 7579946 intergenic not near genes chr2L 7580002 intergenic not near genes chr2L_18_7575001 chr2L_7575001 RAL-301_75b 155 chr2L 7630319 7630349 chr2L 7630432 7630462 8 113 4.0 4.5 4.2 1.5 143 chr2L 7630319 intergenic not near genes chr2L 7630390 intergenic not near genes chr2L 7630462 intergenic not near genes chr2L_8_7630001 chr2L_7630001 RAL-301_75b 156 chr2L 7775643 7775659 chr2L 7775735 7775750 8 92 6.0 3.0 4.5 1.5 107 chr2L 7775643 intergenic CG7179 - chr2L 7775696 intergenic CG7179 - chr2L 7775750 intergenic CG7179 - chr2L_8_7775001 chr2L_7775001 RAL-301_75b 157 chr2L 7922748 7922763 chr2L 7922829 7922844 9 81 1.0 4.5 2.8 2.4 96 chr2L 7922748 intron Snoo - chr2L 7922796 intron Snoo - chr2L 7922844 intron Snoo - chr2L_9_7920001 chr2L_7920001 RAL-301_75b 158 chr2L 7997037 7997055 chr2L 7997133 7997154 5 99 5.5 7.0 6.2 0.7 117 chr2L 7997037 intron CG7227 - chr2L 7997096 intron CG7227 - chr2L 7997154 intron CG7227 - chr2L_5_7995001 chr2L_7995001 RAL-301_75b 159 chr2L 8003047 8003059 chr2L 8003129 8003140 5 82 0.5 8.5 4.5 0.9 93 chr2L 8003047 intron Wwox - chr2L 8003094 intron Wwox - chr2L 8003140 intron Wwox - chr2L_5_8000001 chr2L_8000001 RAL-301_75b 160 chr2L 8013616 8013627 chr2L 8018821 8018832 copia 10 5204 1.5 0.0 0.8 5.6 5216 chr2L 8013616 intron Tg + chr2L 8016224 intron Tg + chr2L 8018832 intron Tg + chr2L_10_8015001 chr2L_8015001 RAL-301_75b 161 chr2L 8018823 8018833 chr2L 8023607 8023617 Doc 6 4784 0.0 3.0 1.5 2.4 4794 chr2L 8018823 intron Tg + chr2L 8021220 intron Tg + chr2L 8023617 intron Tg + chr2L_6_8020001 chr2L_8020001 RAL-301_75b 162 chr2L 8044097 8044129 chr2L 8044175 8044208 19 78 1.5 3.5 2.5 5.4 111 chr2L 8044097 intron CG7466 + chr2L 8044152 intron CG7466 + chr2L 8044208 intron CG7466 + chr2L_19_8040001 chr2L_8040001 RAL-301_75b 163 chr2L 8165343 8165358 chr2L 8166054 8166069 4 711 2.5 3.5 3.0 1.0 726 chr2L 8165343 intron Piezo + chr2L 8165706 intron Piezo + chr2L 8166069 intron Piezo + chr2L_4_8165001 chr2L_8165001 RAL-301_75b 164 chr2L 8233145 8233145 chr2L 8233228 8233229 4 84 9.0 11.5 10.2 0.4 84 chr2L 8233145 intron Pvr - chr2L 8233187 intron Pvr - chr2L 8233229 intron Pvr - chr2L_4_8230001 chr2L_8230001 RAL-301_75b 165 chr2L 8253314 8253338 chr2L 8253390 8253413 6 75 2.5 4.5 3.5 1.3 99 chr2L 8253314 intron CG8086 - chr2L 8253364 intron CG8086 - chr2L 8253413 intron CG8086 - chr2L_6_8250001 chr2L_8250001 RAL-301_75b 166 chr2L 8271620 8271651 chr2L 8271695 8271727 7 76 0.5 1.0 0.8 3.9 107 chr2L 8271620 intron Btk29A - chr2L 8271674 intron Btk29A - chr2L 8271727 intron Btk29A - chr2L_7_8270001 chr2L_8270001 RAL-301_75b 167 chr2L 8336520 8336548 chr2L 8336604 8336633 6 85 5.0 6.0 5.5 0.9 113 chr2L 8336520 intergenic not near genes chr2L 8336576 intergenic not near genes chr2L 8336633 intergenic not near genes chr2L_6_8335001 chr2L_8335001 RAL-301_75b 168 chr2L 8336936 8336965 chr2L 8337015 8337044 7 78 0.0 6.0 3.0 1.8 108 chr2L 8336936 intergenic not near genes chr2L 8336990 intergenic not near genes chr2L 8337044 intergenic not near genes chr2L_7_8335001 chr2L_8335001 RAL-301_75b 169 chr2L 8411792 8411814 chr2L 8411944 8411966 5 152 4.0 4.5 4.2 1.0 174 chr2L 8411792 5` UTR CG13397 - chr2L 8411879 intergenic CG13397 -,CG13398 - chr2L 8411966 intergenic CG13397 -,CG13398 - chr2L_5_8410001 chr2L_8410001 RAL-301_75b 170 chr2L 8452421 8452453 chr2L 8461591 8461624 roo 11 9170 2.0 1.5 1.8 3.9 9203 chr2L 8452421 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461624 intron fu12 - chr2L_11_8455001 chr2L_8455001 RAL-301_75b 171 chr2L 8498209 8498222 chr2L 8498290 8498298 5 80 11.5 12.0 11.8 0.4 89 chr2L 8498209 intron Dh31 - chr2L 8498254 intron Dh31 - chr2L 8498298 intron Dh31 - chr2L_5_8495001 chr2L_8495001 RAL-301_75b 172 chr2L 8507442 8507453 chr2L 8507524 8507535 6 82 11.5 9.0 10.2 0.5 93 chr2L 8507442 intergenic not near genes chr2L 8507488 intergenic not near genes chr2L 8507535 intergenic not near genes chr2L_6_8505001 chr2L_8505001 RAL-301_75b 173 chr2L 8594465 8594475 chr2L 8601519 8601529 297 4 7054 6.5 1.5 4.0 0.8 7064 chr2L 8594465 intron,3` UTR Sema-1a +,CR43855 - chr2L 8597997 intron Sema-1a + chr2L 8601529 intron Sema-1a + chr2L_4_8595001 chr2L_8595001 RAL-301_75b 174 chr2L 8612857 8612870 chr2L 8612934 8612946 5 77 3.0 3.0 3.0 1.2 89 chr2L 8612857 intron Sema-1a + chr2L 8612902 intron Sema-1a + chr2L 8612946 intron Sema-1a + chr2L_5_8610001 chr2L_8610001 RAL-301_75b 175 chr2L 8723113 8723148 chr2L 8731490 8731525 Tirant 13 8377 2.5 0.5 1.5 5.2 8412 chr2L 8723113 intron raw - chr2L 8727319 intron raw - chr2L 8731525 intron raw - chr2L_13_8725001 chr2L_8725001 RAL-301_75b 176 chr2L 8772790 8772805 chr2L 8772875 8772890 7 85 4.0 3.0 3.5 1.6 100 chr2L 8772790 intergenic CG9466 -,CG9465 - chr2L 8772840 intergenic CG9466 -,CG9465 - chr2L 8772890 intergenic CG9466 - chr2L_7_8770001 chr2L_8770001 RAL-301_75b 177 chr2L 8774234 8774235 chr2L 10383903 10383903 4 1609669 16.0 13.5 14.8 0.3 1609669 chr2L 8774234 intron CG9466 - chr2L 9579068 intron CG31709 - chr2L 10383903 exon CG5096 + chr2L_4_9575001 chr2L_9575001 RAL-301_75b 178 chr2L 8788753 8788778 chr2L 8788843 8788869 8 91 3.0 7.0 5.0 1.3 116 chr2L 8788753 intergenic not near genes chr2L 8788811 intergenic not near genes chr2L 8788869 intergenic not near genes chr2L_8_8785001 chr2L_8785001 RAL-301_75b 179 chr2L 8834092 8834110 chr2L 8834173 8834194 4 82 3.0 1.0 2.0 1.3 102 chr2L 8834092 intergenic not near genes chr2L 8834143 intergenic not near genes chr2L 8834194 intergenic not near genes chr2L_4_8830001 chr2L_8830001 RAL-301_75b 180 chr2L 8902453 8902484 chr2L 8902599 8902630 7 147 6.5 5.0 5.8 1.0 177 chr2L 8902453 intron CG34398 + chr2L 8902542 intron CG34398 + chr2L 8902630 intron CG34398 + chr2L_7_8900001 chr2L_8900001 RAL-301_75b 181 chr2L 8939666 8939699 chr2L 8939746 8939779 7 80 2.5 6.5 4.5 1.3 113 chr2L 8939666 3` UTR Tsp29Fb + chr2L 8939722 3` UTR Tsp29Fb + chr2L 8939779 intergenic CG9510 -,Tsp29Fb + chr2L_7_8935001 chr2L_8935001 RAL-301_75b 182 chr2L 9000277 9000307 chr2L 9007787 9007817 roo 9 7510 1.5 0.5 1.0 4.5 7540 chr2L 9000277 intergenic Try29F + chr2L 9004047 intergenic not near genes chr2L 9007817 intergenic not near genes chr2L_9_9000001 chr2L_9000001 RAL-301_75b 183 chr2L 9025544 9025829 chr2L 9025621 9025913 4 80 5.5 7.0 6.2 0.6 369 chr2L 9025544 intron CG9582 - chr2L 9025728 intron,3` UTR CG9582 -,CR44352 - chr2L 9025913 intron,3` UTR CG9582 -,CR44352 - chr2L_4_9025001 chr2L_9025001 RAL-301_75b 184 chr2L 9040042 9040056 chr2L 9040129 9040142 11 86 6.0 6.0 6.0 1.6 100 chr2L 9040042 intergenic not near genes chr2L 9040092 intergenic not near genes chr2L 9040142 intergenic not near genes chr2L_11_9040001 chr2L_9040001 RAL-301_75b 185 chr2L 9040890 9040901 chr2L 9040966 9040977 9 76 6.0 2.5 4.2 1.7 87 chr2L 9040890 intergenic not near genes chr2L 9040934 intergenic not near genes chr2L 9040977 intergenic not near genes chr2L_9_9040001 chr2L_9040001 RAL-301_75b 186 chr2L 9109698 9109728 chr2L 9109783 9109809 7 84 3.5 1.5 2.5 2.0 111 chr2L 9109698 intergenic not near genes chr2L 9109754 intergenic not near genes chr2L 9109809 intergenic not near genes chr2L_7_9105001 chr2L_9105001 RAL-301_75b 187 chr2L 9156552 9156571 chr2L 9156630 9156647 4 76 9.0 6.0 7.5 0.5 95 chr2L 9156552 exon CG32982 + chr2L 9156600 intron CG32982 + chr2L 9156647 intron CG32982 + chr2L_4_9155001 chr2L_9155001 RAL-301_75b 188 chr2L 9158782 9158794 chr2L 9158879 9158891 6 97 5.0 4.5 4.8 1.0 109 chr2L 9158782 intron CG32982 + chr2L 9158836 intron CG32982 + chr2L 9158891 intron CG32982 + chr2L_6_9155001 chr2L_9155001 RAL-301_75b 189 chr2L 9227378 9227397 chr2L 9227468 9227485 11 89 2.5 5.5 4.0 2.2 107 chr2L 9227378 intron tai + chr2L 9227432 intron tai + chr2L 9227485 intron tai + chr2L_11_9225001 chr2L_9225001 RAL-301_75b 190 chr2L 9259228 9259244 chr2L 9259321 9259337 5 93 1.0 4.0 2.5 1.4 109 chr2L 9259228 intron Ggamma30A + chr2L 9259282 intron Ggamma30A + chr2L 9259337 intron Ggamma30A + chr2L_5_9255001 chr2L_9255001 RAL-301_75b 191 chr2L 9280009 9280024 chr2L 9280103 9280118 6 94 0.0 5.0 2.5 1.7 109 chr2L 9280009 intron Ggamma30A + chr2L 9280064 intron Ggamma30A + chr2L 9280118 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-301_75b 192 chr2L 9287327 9287356 chr2L 9287424 9287453 18 96 3.0 3.5 3.2 4.3 126 chr2L 9287327 intron Ggamma30A + chr2L 9287390 intron Ggamma30A + chr2L 9287453 intron Ggamma30A + chr2L_18_9285001 chr2L_9285001 RAL-301_75b 193 chr2L 9290790 9290799 chr2L 9290867 9290875 7 76 0.0 2.5 1.2 3.2 85 chr2L 9290790 intron Ggamma30A + chr2L 9290832 intron Ggamma30A + chr2L 9290875 intron Ggamma30A + chr2L_7_9290001 chr2L_9290001 RAL-301_75b 194 chr2L 9297380 9297394 chr2L 9297457 9297470 5 77 7.0 4.0 5.5 0.8 90 chr2L 9297380 3` UTR Ggamma30A + chr2L 9297425 3` UTR Ggamma30A + chr2L 9297470 3` UTR Ggamma30A + chr2L_5_9295001 chr2L_9295001 RAL-301_75b 195 chr2L 9301191 9301222 chr2L 9301522 9301553 5 331 8.0 2.0 5.0 0.8 362 chr2L 9301191 3` UTR Ggamma30A + chr2L 9301372 3` UTR Ggamma30A + chr2L 9301553 3` UTR Ggamma30A + chr2L_5_9300001 chr2L_9300001 RAL-301_75b 196 chr2L 9303547 9303548 chr2L 9303627 9303628 4 80 17.5 21.0 19.2 0.2 81 chr2L 9303547 intergenic not near genes chr2L 9303588 intergenic not near genes chr2L 9303628 intergenic not near genes chr2L_4_9300001 chr2L_9300001 RAL-301_75b 197 chr2L 9322813 9322826 chr2L 9322889 9322902 4 76 3.5 1.5 2.5 1.1 89 chr2L 9322813 intergenic not near genes chr2L 9322858 intergenic not near genes chr2L 9322902 intergenic not near genes chr2L_4_9320001 chr2L_9320001 RAL-301_75b 198 chr2L 9393504 9393522 chr2L 9396471 9396489 jockey 4 2966 2.5 5.5 4.0 0.8 2985 chr2L 9393504 intron Shawl - chr2L 9394996 intron Shawl - chr2L 9396489 intron Shawl - chr2L_4_9390001 chr2L_9390001 RAL-301_75b 199 chr2L 9421021 9421027 chr2L 9421165 9421171 12 144 0.0 5.0 2.5 3.4 150 chr2L 9421021 intron Mco1 + chr2L 9421096 intron Mco1 + chr2L 9421171 intron Mco1 + chr2L_12_9420001 chr2L_9420001 RAL-301_75b 200 chr2L 9428519 9428531 chr2L 9428598 9428610 4 79 5.5 5.0 5.2 0.6 91 chr2L 9428519 3` UTR CG42847 + chr2L 9428564 3` UTR CG42847 + chr2L 9428610 3` UTR CG42847 + chr2L_4_9425001 chr2L_9425001 RAL-301_75b 201 chr2L 9456942 9457093 chr2L 9457023 9457170 8 80 12.5 7.5 10.0 0.7 228 chr2L 9456942 intron numb + chr2L 9457056 intron numb + chr2L 9457170 intron numb + chr2L_8_9455001 chr2L_9455001 RAL-301_75b 202 chr2L 9509809 9509840 chr2L 9509890 9509921 13 81 4.0 3.5 3.8 2.7 112 chr2L 9509809 intron CG33298 + chr2L 9509865 intron CG33298 + chr2L 9509921 intron CG33298 + chr2L_13_9505001 chr2L_9505001 RAL-301_75b 203 chr2L 9577432 9577443 chr2L 9577531 9577543 10 99 1.0 5.5 3.2 2.4 111 chr2L 9577432 intergenic not near genes chr2L 9577488 intergenic not near genes chr2L 9577543 intergenic not near genes chr2L_10_9575001 chr2L_9575001 RAL-301_75b 204 chr2L 9756766 9756783 chr2L 9756872 9756891 4 108 6.5 4.5 5.5 0.6 125 chr2L 9756766 intergenic not near genes chr2L 9756828 intergenic not near genes chr2L 9756891 intergenic not near genes chr2L_4_9755001 chr2L_9755001 RAL-301_75b 205 chr2L 9770772 9770777 chr2L 9770873 9770880 1360 5 102 8.5 11.0 9.8 0.5 108 chr2L 9770772 intron ppk18 - chr2L 9770826 intron ppk18 - chr2L 9770880 intron ppk18 - chr2L_5_9770001 chr2L_9770001 RAL-301_75b 206 chr2L 9775983 9776004 chr2L 9776065 9776086 7 82 5.5 2.0 3.8 1.5 103 chr2L 9775983 intergenic not near genes chr2L 9776034 intergenic not near genes chr2L 9776086 intergenic not near genes chr2L_7_9775001 chr2L_9775001 RAL-301_75b 207 chr2L 9862351 9862354 chr2L 9862457 9862462 4 106 0.0 5.5 2.8 1.1 111 chr2L 9862351 intron nAChRalpha6 - chr2L 9862406 intron nAChRalpha6 - chr2L 9862462 intron nAChRalpha6 - chr2L_4_9860001 chr2L_9860001 RAL-301_75b 208 chr2L 9892507 9892533 chr2L 9892583 9892609 4 75 5.5 4.5 5.0 0.7 102 chr2L 9892507 intron mtDNA-helicase - chr2L 9892558 intron mtDNA-helicase - chr2L 9892609 intron mtDNA-helicase - chr2L_4_9890001 chr2L_9890001 RAL-301_75b 209 chr2L 9973724 9973748 chr2L 9980843 9980867 HMS-Beagle 12 7119 4.5 5.5 5.0 2.0 7143 chr2L 9973724 intergenic not near genes chr2L 9977296 intergenic not near genes chr2L 9980867 intergenic not near genes chr2L_12_9975001 chr2L_9975001 RAL-301_75b 210 chr2L 9982202 9982232 chr2L 9982305 9982335 5 103 1.5 10.0 5.8 0.7 133 chr2L 9982202 intergenic not near genes chr2L 9982268 intergenic not near genes chr2L 9982335 intergenic not near genes chr2L_5_9980001 chr2L_9980001 RAL-301_75b 211 chr2L 9986364 9986364 chr2L 9986458 9986459 5 95 10.0 11.5 10.8 0.4 95 chr2L 9986364 intron bib + chr2L 9986412 intron bib + chr2L 9986459 intron bib + chr2L_5_9985001 chr2L_9985001 RAL-301_75b 212 chr2L 10023070 10023103 chr2L 10023155 10023188 8 85 3.5 7.0 5.2 1.3 118 chr2L 10023070 intergenic not near genes chr2L 10023129 intergenic not near genes chr2L 10023188 intergenic not near genes chr2L_8_10020001 chr2L_10020001 RAL-301_75b 213 chr2L 10051724 10051746 chr2L 10051809 10051830 5 84 5.0 3.0 4.0 1.0 106 chr2L 10051724 5` UTR CR44874 + chr2L 10051777 5` UTR CR44874 + chr2L 10051830 5` UTR CR44874 + chr2L_5_10050001 chr2L_10050001 RAL-301_75b 214 chr2L 10087480 10087484 chr2L 10087557 10087561 4 77 7.0 4.5 5.8 0.6 81 chr2L 10087480 intron CG44153 - chr2L 10087520 intron CG44153 - chr2L 10087561 intron CG44153 - chr2L_4_10085001 chr2L_10085001 RAL-301_75b 215 chr2L 10153208 10153237 chr2L 10153286 10153316 7 78 3.5 5.5 4.5 1.3 108 chr2L 10153208 intron,exon CG44153 -,CG4839 + chr2L 10153262 intron,intron CG44153 -,CG4839 + chr2L 10153316 intron,intron CG44153 -,CG4839 + chr2L_7_10150001 chr2L_10150001 RAL-301_75b 216 chr2L 10156321 10156332 chr2L 10163791 10163802 blood 7 7470 12.0 2.5 7.2 0.9 7481 chr2L 10156321 intron,3` UTR CG44153 -,CG4839 + chr2L 10160062 intron CG44153 - chr2L 10163802 intron CG44153 - chr2L_7_10160001 chr2L_10160001 RAL-301_75b 217 chr2L 10176542 10176572 chr2L 10176825 10176855 4 283 3.5 11.0 7.2 0.5 313 chr2L 10176542 intron CG44153 - chr2L 10176698 intron CG44153 - chr2L 10176855 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-301_75b 218 chr2L 10180590 10180601 chr2L 10180677 10180688 8 87 7.5 8.0 7.8 0.9 98 chr2L 10180590 intergenic CG44153 - chr2L 10180639 intergenic CG44153 - chr2L 10180688 intergenic CG44153 - chr2L_8_10180001 chr2L_10180001 RAL-301_75b 219 chr2L 10314503 10314524 chr2L 10314612 10314633 5 109 2.0 1.0 1.5 2.0 130 chr2L 10314503 intergenic CG5384 -,CG4972 + chr2L 10314568 intergenic CG5384 -,CG4972 + chr2L 10314633 intergenic CG4972 +,CG5384 - chr2L_5_10310001 chr2L_10310001 RAL-301_75b 220 chr2L 10592850 10592874 chr2L 10600511 10600536 opus 7 7661 0.5 6.5 3.5 1.6 7686 chr2L 10592850 intron Trim9 + chr2L 10596693 intron Trim9 + chr2L 10600536 intron Trim9 + chr2L_7_10595001 chr2L_10595001 RAL-301_75b 221 chr2L 10603228 10603264 chr2L 10603331 10603367 7 102 5.0 3.5 4.2 1.3 139 chr2L 10603228 intron Trim9 + chr2L 10603298 intron Trim9 + chr2L 10603367 intron Trim9 + chr2L_7_10600001 chr2L_10600001 RAL-301_75b 222 chr2L 10640638 10640672 chr2L 10640727 10640761 10 89 8.5 10.0 9.2 1.0 123 chr2L 10640638 exon CG31872 + chr2L 10640700 exon CG31872 + chr2L 10640761 exon CG31872 + chr2L_10_10640001 chr2L_10640001 RAL-301_75b 223 chr2L 10647676 10647679 chr2L 10648115 10648122 6 440 12.0 20.5 16.2 0.3 446 chr2L 10647676 exon CG17097 + chr2L 10647899 exon CG17097 + chr2L 10648122 exon CG17097 + chr2L_6_10645001 chr2L_10645001 RAL-301_75b 224 chr2L 10656592 10656609 chr2L 10656668 10656685 4 76 6.5 8.0 7.2 0.5 93 chr2L 10656592 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656685 intergenic not near genes chr2L_4_10655001 chr2L_10655001 RAL-301_75b 225 chr2L 10675774 10675795 chr2L 10676159 10676180 6 385 15.0 17.5 16.2 0.3 406 chr2L 10675774 intergenic not near genes chr2L 10675977 intergenic not near genes chr2L 10676180 intergenic not near genes chr2L_6_10675001 chr2L_10675001 RAL-301_75b 226 chr2L 10705455 10705468 chr2L 10705534 10705551 5 82 5.5 10.5 8.0 0.6 96 chr2L 10705455 exon Lip2 - chr2L 10705503 intron Lip2 - chr2L 10705551 intron Lip2 - chr2L_5_10705001 chr2L_10705001 RAL-301_75b 227 chr2L 10727286 10727300 chr2L 10727397 10727411 9 111 5.5 4.5 5.0 1.5 125 chr2L 10727286 intron CG6431 + chr2L 10727348 intron CG6431 + chr2L 10727411 intron CG6431 + chr2L_9_10725001 chr2L_10725001 RAL-301_75b 228 chr2L 10777236 10777238 chr2L 10777348 10777350 4 112 10.5 8.0 9.2 0.4 114 chr2L 10777236 intron CG31869 - chr2L 10777293 intron CG31869 - chr2L 10777350 intron CG31869 - chr2L_4_10775001 chr2L_10775001 RAL-301_75b 229 chr2L 10793323 10793348 chr2L 10793400 10793424 6 77 7.0 6.5 6.8 0.8 101 chr2L 10793323 intron CG31869 - chr2L 10793374 intron CG31869 - chr2L 10793424 intron CG31869 - chr2L_6_10790001 chr2L_10790001 RAL-301_75b 230 chr2L 10803775 10803806 chr2L 10803860 10803890 7 84 1.0 3.0 2.0 2.3 115 chr2L 10803775 intergenic Nos - chr2L 10803832 intergenic Nos - chr2L 10803890 intergenic Nos - chr2L_7_10800001 chr2L_10800001 RAL-301_75b 231 chr2L 10862845 10862871 chr2L 10864462 10864487 Rt1c 5 1616 1.5 4.5 3.0 1.2 1642 chr2L 10862845 3` UTR CR43807 - chr2L 10863666 intron CR43807 - chr2L 10864487 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 RAL-301_75b 232 chr2L 10946946 10946974 chr2L 10956160 10956189 roo 5 9215 1.0 5.5 3.2 1.2 9243 chr2L 10946946 intron dpr2 - chr2L 10951568 intron dpr2 - chr2L 10956189 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-301_75b 233 chr2L 10970301 10970317 chr2L 10970427 10970443 5 126 6.0 5.5 5.8 0.7 142 chr2L 10970301 intergenic CG33129 -,YL-1 + chr2L 10970372 intergenic YL-1 +,CG33129 - chr2L 10970443 5` UTR YL-1 + chr2L_5_10970001 chr2L_10970001 RAL-301_75b 234 chr2L 11174650 11174659 chr2L 11174727 11174736 4 77 2.0 10.0 6.0 0.6 86 chr2L 11174650 intron Ca-beta - chr2L 11174693 intron Ca-beta - chr2L 11174736 intron Ca-beta - chr2L_4_11170001 chr2L_11170001 RAL-301_75b 235 chr2L 11253344 11253367 chr2L 11253425 11253447 6 81 1.5 0.5 1.0 3.0 103 chr2L 11253344 intron ab + chr2L 11253396 intron ab + chr2L 11253447 intron ab + chr2L_6_11250001 chr2L_11250001 RAL-301_75b 236 chr2L 11309005 11309019 chr2L 11309112 11309123 13 107 7.0 1.0 4.0 2.6 118 chr2L 11309005 intergenic not near genes chr2L 11309064 intergenic not near genes chr2L 11309123 intergenic not near genes chr2L_13_11305001 chr2L_11305001 RAL-301_75b 237 chr2L 10579569 10579569 chr2L 11348439 11348463 5 768880 11.0 5.5 8.2 0.5 768894 chr2L 10579569 intron Trim9 + chr2L 10964016 5` UTR dpr2 - chr2L 11348463 intergenic not near genes chr2L_5_10960001 chr2L_10960001 RAL-301_75b 238 chr2L 11414971 11414990 chr2L 11415054 11415073 9 83 7.5 2.5 5.0 1.5 102 chr2L 11414971 intergenic not near genes chr2L 11415022 intergenic not near genes chr2L 11415073 intergenic not near genes chr2L_9_11415001 chr2L_11415001 RAL-301_75b 239 chr2L 11418659 11418687 chr2L 11418738 11418766 4 78 1.5 6.5 4.0 0.8 107 chr2L 11418659 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418766 intergenic not near genes chr2L_4_11415001 chr2L_11415001 RAL-301_75b 240 chr2L 11485689 11485704 chr2L 11485765 11485780 5 76 3.5 1.5 2.5 1.4 91 chr2L 11485689 exon,5` UTR CG43355 +,sala + chr2L 11485734 3` UTR,5` UTR CG43355 +,sala + chr2L 11485780 intron,intron CG43355 +,sala + chr2L_5_11485001 chr2L_11485001 RAL-301_75b 241 chr2L 11520173 11520192 chr2L 11520312 11520331 6 139 3.0 7.5 5.2 1.0 158 chr2L 11520173 exon CG14929 + chr2L 11520252 exon CG14929 + chr2L 11520331 exon CG14929 + chr2L_6_11520001 chr2L_11520001 RAL-301_75b 242 chr2L 11540586 11540615 chr2L 11547988 11548017 Tabor 6 7402 2.0 4.5 3.2 1.4 7431 chr2L 11540586 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548017 intergenic not near genes chr2L_6_11540001 chr2L_11540001 RAL-301_75b 243 chr2L 11563638 11563667 chr2L 11568842 11568871 copia 14 5204 2.5 6.0 4.2 2.7 5233 chr2L 11563638 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568871 intergenic not near genes chr2L_14_11565001 chr2L_11565001 RAL-301_75b 244 chr2L 11614052 11614084 chr2L 11615545 11615579 hopper2 4 1494 2.5 3.0 2.8 1.1 1527 chr2L 11614052 intron kek2 + chr2L 11614816 intron kek2 + chr2L 11615579 intron kek2 + chr2L_4_11610001 chr2L_11610001 RAL-301_75b 245 chr2L 11633173 11633197 chr2L 11633268 11633299 4 100 7.5 9.5 8.5 0.4 126 chr2L 11633173 intergenic not near genes chr2L 11633236 intergenic not near genes chr2L 11633299 intergenic not near genes chr2L_4_11630001 chr2L_11630001 RAL-301_75b 246 chr2L 11698572 11698587 chr2L 11698665 11698677 9 92 7.0 9.5 8.2 1.0 105 chr2L 11698572 intergenic not near genes chr2L 11698624 intergenic not near genes chr2L 11698677 intergenic not near genes chr2L_9_11695001 chr2L_11695001 RAL-301_75b 247 chr2L 11710506 11710534 chr2L 11710589 11710617 6 83 10.5 6.0 8.2 0.7 111 chr2L 11710506 intergenic not near genes chr2L 11710562 intergenic not near genes chr2L 11710617 intergenic not near genes chr2L_6_11710001 chr2L_11710001 RAL-301_75b 248 chr2L 11713514 11713540 chr2L 11720982 11721008 blood 12 7468 0.5 1.5 1.0 6.0 7494 chr2L 11713514 intergenic not near genes chr2L 11717261 intergenic not near genes chr2L 11721008 intergenic CR44143 + chr2L_12_11715001 chr2L_11715001 RAL-301_75b 249 chr2L 11752869 11752881 chr2L 11753159 11753171 4 290 9.0 3.0 6.0 0.6 302 chr2L 11752869 intergenic CG42470 - chr2L 11753020 3` UTR CG42470 - chr2L 11753171 3` UTR CG42470 - chr2L_4_11750001 chr2L_11750001 RAL-301_75b 250 chr2L 11824941 11824954 chr2L 11825029 11825042 4 88 9.0 6.5 7.8 0.5 101 chr2L 11824941 intron Pde1c - chr2L 11824992 intron Pde1c - chr2L 11825042 intron Pde1c - chr2L_4_11820001 chr2L_11820001 RAL-301_75b 251 chr2L 11841365 11841393 chr2L 11841443 11841471 7 86 3.0 0.0 1.5 2.8 106 chr2L 11841365 intron Pde1c - chr2L 11841418 intron Pde1c - chr2L 11841471 intron Pde1c - chr2L_7_11840001 chr2L_11840001 RAL-301_75b 252 chr2L 11870944 11870978 chr2L 11871022 11871056 8 77 0.0 2.0 1.0 4.0 112 chr2L 11870944 intron Pde1c - chr2L 11871000 intron Pde1c - chr2L 11871056 intron Pde1c - chr2L_8_11870001 chr2L_11870001 RAL-301_75b 253 chr2L 12046514 12046524 chr2L 12046638 12046648 9 124 7.0 5.5 6.2 1.2 134 chr2L 12046514 5` UTR CR44589 + chr2L 12046581 5` UTR CR44589 + chr2L 12046648 5` UTR CR44589 + chr2L_9_12045001 chr2L_12045001 RAL-301_75b 254 chr2L 12067328 12067361 chr2L 12074380 12074413 297 10 7052 0.0 3.0 1.5 4.0 7085 chr2L 12067328 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074413 intergenic not near genes chr2L_10_12070001 chr2L_12070001 RAL-301_75b 255 chr2L 12080691 12080702 chr2L 12080802 12080813 5 111 1.5 7.5 4.5 0.9 122 chr2L 12080691 intergenic CR44590 -,CR44591 + chr2L 12080752 intergenic CR44590 -,CR44591 + chr2L 12080813 3` UTR CR44590 - chr2L_5_12080001 chr2L_12080001 RAL-301_75b 256 chr2L 12131075 12131090 chr2L 12131215 12131227 6 138 21.0 15.0 18.0 0.3 152 chr2L 12131075 intron rho-6 - chr2L 12131151 intron rho-6 - chr2L 12131227 intron rho-6 - chr2L_6_12130001 chr2L_12130001 RAL-301_75b 257 chr2L 12131482 12131490 chr2L 12131577 12131586 7 96 1.5 6.5 4.0 1.4 104 chr2L 12131482 intron rho-6 - chr2L 12131534 intron rho-6 - chr2L 12131586 intron rho-6 - chr2L_7_12130001 chr2L_12130001 RAL-301_75b 258 chr2L 12132723 12132746 chr2L 12132809 12132832 14 86 2.0 2.0 2.0 4.7 109 chr2L 12132723 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132832 intron rho-6 - chr2L_14_12130001 chr2L_12130001 RAL-301_75b 259 chr2L 12151909 12151914 chr2L 12152004 12152009 4 95 6.5 11.5 9.0 0.4 100 chr2L 12151909 intron CG31760 + chr2L 12151959 intron CG31760 + chr2L 12152009 intron CG31760 + chr2L_4_12150001 chr2L_12150001 RAL-301_75b 260 chr2L 12153936 12153962 chr2L 12154013 12154037 4 76 1.0 1.5 1.2 1.8 101 chr2L 12153936 exon CG31760 + chr2L 12153986 intron CG31760 + chr2L 12154037 intron CG31760 + chr2L_4_12150001 chr2L_12150001 RAL-301_75b 261 chr2L 12203300 12203327 chr2L 12203381 12203407 16 81 3.5 4.5 4.0 3.2 107 chr2L 12203300 intron aret + chr2L 12203354 intron aret + chr2L 12203407 intron aret + chr2L_16_12200001 chr2L_12200001 RAL-301_75b 262 chr2L 12229583 12229609 chr2L 12229660 12229686 16 77 2.0 2.0 2.0 5.3 103 chr2L 12229583 intron aret + chr2L 12229634 intron aret + chr2L 12229686 intron aret + chr2L_16_12225001 chr2L_12225001 RAL-301_75b 263 chr2L 12237004 12237026 chr2L 12237089 12237111 5 85 6.0 4.0 5.0 0.8 107 chr2L 12237004 intron aret + chr2L 12237058 intron aret + chr2L 12237111 intron aret + chr2L_5_12235001 chr2L_12235001 RAL-301_75b 264 chr2L 12240001 12240032 chr2L 12240082 12240113 7 81 4.5 5.0 4.8 1.2 112 chr2L 12240001 intron aret + chr2L 12240057 intron aret + chr2L 12240113 intron aret + chr2L_7_12240001 chr2L_12240001 RAL-301_75b 265 chr2L 12243973 12244000 chr2L 12244050 12244071 5 76 11.5 10.0 10.8 0.4 98 chr2L 12243973 intron aret + chr2L 12244022 intron aret + chr2L 12244071 intron aret + chr2L_5_12240001 chr2L_12240001 RAL-301_75b 266 chr2L 12266533 12266550 chr2L 12266616 12266632 4 83 5.0 3.0 4.0 0.8 99 chr2L 12266533 intron aret + chr2L 12266582 intron aret + chr2L 12266632 intron aret + chr2L_4_12265001 chr2L_12265001 RAL-301_75b 267 chr2L 12293567 12293587 chr2L 12293664 12293683 4 97 12.5 12.5 12.5 0.3 116 chr2L 12293567 intron aret + chr2L 12293625 intron aret + chr2L 12293683 intron aret + chr2L_4_12290001 chr2L_12290001 RAL-301_75b 268 chr2L 12327814 12327826 chr2L 12327955 12327967 9 141 6.0 6.0 6.0 1.3 153 chr2L 12327814 intergenic not near genes chr2L 12327890 intergenic not near genes chr2L 12327967 intergenic not near genes chr2L_9_12325001 chr2L_12325001 RAL-301_75b 269 chr2L 12337287 12337289 chr2L 12337375 12337377 5 88 6.0 2.5 4.2 1.0 90 chr2L 12337287 intergenic not near genes chr2L 12337332 intergenic not near genes chr2L 12337377 intergenic not near genes chr2L_5_12335001 chr2L_12335001 RAL-301_75b 270 chr2L 12337301 12337314 chr2L 12337389 12337401 7 88 3.5 1.5 2.5 2.0 100 chr2L 12337301 intergenic not near genes chr2L 12337351 intergenic not near genes chr2L 12337401 intergenic not near genes chr2L_7_12335001 chr2L_12335001 RAL-301_75b 271 chr2L 12349631 12349660 chr2L 12349725 12349754 4 94 6.0 3.5 4.8 0.7 123 chr2L 12349631 intron bru-2 + chr2L 12349692 intron bru-2 + chr2L 12349754 intron bru-2 + chr2L_4_12345001 chr2L_12345001 RAL-301_75b 272 chr2L 12366868 12366890 chr2L 12366954 12366976 6 85 12.5 9.5 11.0 0.5 108 chr2L 12366868 intron bru-2 + chr2L 12366922 intron bru-2 + chr2L 12366976 intron bru-2 + chr2L_6_12365001 chr2L_12365001 RAL-301_75b 273 chr2L 12384936 12384955 chr2L 12385021 12385040 7 85 8.5 8.5 8.5 0.7 104 chr2L 12384936 intron bru-2 + chr2L 12384988 intron bru-2 + chr2L 12385040 intron bru-2 + chr2L_7_12380001 chr2L_12380001 RAL-301_75b 274 chr2L 12408937 12408973 chr2L 12409028 12409064 21 90 5.5 11.0 8.2 2.3 127 chr2L 12408937 intron vir-1 - chr2L 12409000 intron vir-1 - chr2L 12409064 intron vir-1 - chr2L_21_12405001 chr2L_12405001 RAL-301_75b 275 chr2L 12418869 12418894 chr2L 12418964 12418986 7 94 6.5 4.0 5.2 1.1 117 chr2L 12418869 intron vir-1 - chr2L 12418928 intron vir-1 - chr2L 12418986 intron vir-1 - chr2L_7_12415001 chr2L_12415001 RAL-301_75b 276 chr2L 12470758 12470770 chr2L 12470834 12470847 5 77 7.5 0.0 3.8 1.0 89 chr2L 12470758 intron bun - chr2L 12470802 intron bun - chr2L 12470847 intron bun - chr2L_5_12470001 chr2L_12470001 RAL-301_75b 277 chr2L 12487892 12487915 chr2L 12487980 12488005 18 89 5.5 4.5 5.0 3.0 113 chr2L 12487892 intron bun - chr2L 12487948 intron bun - chr2L 12488005 intron bun - chr2L_18_12485001 chr2L_12485001 RAL-301_75b 278 chr2L 12490282 12490296 chr2L 12490357 12490372 5 75 6.5 1.5 4.0 1.0 90 chr2L 12490282 intron bun - chr2L 12490327 intron bun - chr2L 12490372 intron bun - chr2L_5_12490001 chr2L_12490001 RAL-301_75b 279 chr2L 12529256 12529266 chr2L 12529408 12529417 4 152 10.5 15.5 13.0 0.3 161 chr2L 12529256 intron bun - chr2L 12529336 intron bun - chr2L 12529417 intron bun - chr2L_4_12525001 chr2L_12525001 RAL-301_75b 280 chr2L 12570357 12570627 chr2L 12570438 12570710 5 81 1.5 0.0 0.8 2.8 353 chr2L 12570357 intergenic CR44598 - chr2L 12570534 intergenic CR44598 - chr2L 12570710 3` UTR CR44598 - chr2L_5_12570001 chr2L_12570001 RAL-301_75b 281 chr2L 12693840 12693868 chr2L 12693917 12693945 6 76 5.5 4.5 5.0 1.0 105 chr2L 12693840 exon CG6153 + chr2L 12693892 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693945 3` UTR CG5780 - chr2L_6_12690001 chr2L_12690001 RAL-301_75b 282 chr2L 12728924 12728939 chr2L 12729164 12729180 pogo 8 241 5.0 6.5 5.8 1.2 256 chr2L 12728924 intron MRP + chr2L 12729052 intron MRP + chr2L 12729180 intron MRP + chr2L_8_12725001 chr2L_12725001 RAL-301_75b 283 chr2L 12731055 12731092 chr2L 12735822 12735859 F-element 12 4767 3.0 2.0 2.5 3.4 4804 chr2L 12731055 intron MRP + chr2L 12733457 intron MRP + chr2L 12735859 intron MRP + chr2L_12_12730001 chr2L_12730001 RAL-301_75b 284 chr2L 12739173 12739205 chr2L 12743954 12743986 Doc 9 4781 1.5 2.0 1.8 3.2 4813 chr2L 12739173 exon MRP + chr2L 12741580 intron MRP + chr2L 12743986 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-301_75b 285 chr2L 12791605 12791637 chr2L 12795279 12795310 F-element 8 3675 6.0 7.0 6.5 1.1 3705 chr2L 12791605 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795310 intergenic not near genes chr2L_8_12790001 chr2L_12790001 RAL-301_75b 286 chr2L 12796889 12796902 chr2L 12796969 12796982 4 80 4.5 5.0 4.8 0.7 93 chr2L 12796889 intergenic not near genes chr2L 12796936 intergenic not near genes chr2L 12796982 intergenic not near genes chr2L_4_12795001 chr2L_12795001 RAL-301_75b 287 chr2L 12811461 12811465 chr2L 12811560 12811564 6 99 1.0 6.0 3.5 1.3 103 chr2L 12811461 intergenic not near genes chr2L 12811512 intergenic not near genes chr2L 12811564 intergenic not near genes chr2L_6_12810001 chr2L_12810001 RAL-301_75b 288 chr2L 12861697 12861727 chr2L 12863163 12863194 hobo 15 1466 2.0 4.5 3.2 3.6 1497 chr2L 12861697 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863194 intergenic not near genes chr2L_15_12860001 chr2L_12860001 RAL-301_75b 289 chr2L 12891521 12891530 chr2L 12891622 12891630 4 100 1.5 1.0 1.2 1.8 109 chr2L 12891521 intergenic not near genes chr2L 12891576 intergenic not near genes chr2L 12891630 intergenic not near genes chr2L_4_12890001 chr2L_12890001 RAL-301_75b 290 chr2L 12906106 12906120 chr2L 12906212 12906226 5 107 2.0 3.5 2.8 1.3 120 chr2L 12906106 intergenic not near genes chr2L 12906166 intergenic not near genes chr2L 12906226 intergenic not near genes chr2L_5_12905001 chr2L_12905001 RAL-301_75b 291 chr2L 12930493 12930498 chr2L 12930569 12930571 4 74 5.5 7.5 6.5 0.5 78 chr2L 12930493 intergenic not near genes chr2L 12930532 intergenic not near genes chr2L 12930571 intergenic not near genes chr2L_4_12930001 chr2L_12930001 RAL-301_75b 292 chr2L 12933850 12933867 chr2L 12941317 12941334 blood 5 7467 6.5 4.0 5.2 0.8 7484 chr2L 12933850 intergenic not near genes chr2L 12937592 intergenic not near genes chr2L 12941334 intergenic not near genes chr2L_5_12935001 chr2L_12935001 RAL-301_75b 293 chr2L 13036247 13036265 chr2L 13036489 13036507 X-element 6 242 4.5 7.0 5.8 0.9 260 chr2L 13036247 intron CG9932 - chr2L 13036377 intron CG9932 - chr2L 13036507 intron CG9932 - chr2L_6_13035001 chr2L_13035001 RAL-301_75b 294 chr2L 13063382 13063415 chr2L 13063459 13063491 14 76 2.5 7.0 4.8 2.4 109 chr2L 13063382 intergenic not near genes chr2L 13063436 intergenic not near genes chr2L 13063491 intergenic not near genes chr2L_14_13060001 chr2L_13060001 RAL-301_75b 295 chr2L 13266395 13266400 chr2L 13266483 13266488 4 88 17.0 17.0 17.0 0.2 93 chr2L 13266395 intron CG44085 + chr2L 13266442 intron CG44085 + chr2L 13266488 intron CG44085 + chr2L_4_13265001 chr2L_13265001 RAL-301_75b 296 chr2L 13342061 13342083 chr2L 13342143 13342165 7 82 4.0 2.5 3.2 1.7 104 chr2L 13342061 intergenic not near genes chr2L 13342113 intergenic not near genes chr2L 13342165 intergenic not near genes chr2L_7_13340001 chr2L_13340001 RAL-301_75b 297 chr2L 13405647 13405679 chr2L 13410444 13410476 Doc 9 4797 4.0 1.5 2.8 2.4 4829 chr2L 13405647 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410476 intron CG7110 + chr2L_9_13405001 chr2L_13405001 RAL-301_75b 298 chr2L 13412330 13412349 chr2L 13412457 13412476 8 127 2.0 2.0 2.0 2.7 146 chr2L 13412330 intergenic CG16848 + chr2L 13412403 intergenic CG16848 + chr2L 13412476 intergenic CG16848 + chr2L_8_13410001 chr2L_13410001 RAL-301_75b 299 chr2L 13422488 13422506 chr2L 13422567 13422585 10 79 0.0 4.5 2.2 3.1 97 chr2L 13422488 intron CG42784 + chr2L 13422536 intron CG42784 + chr2L 13422585 intron CG42784 + chr2L_10_13420001 chr2L_13420001 RAL-301_75b 300 chr2L 13430510 13430533 chr2L 13431939 13431960 9 1428 3.5 7.5 5.5 1.4 1450 chr2L 13430510 intron CG42784 + chr2L 13431235 intron CG42784 + chr2L 13431960 intron CG42784 + chr2L_9_13430001 chr2L_13430001 RAL-301_75b 301 chr2L 13432994 13433016 chr2L 13433095 13433117 10 100 8.5 9.5 9.0 1.0 123 chr2L 13432994 intron CG42784 + chr2L 13433056 intron CG42784 + chr2L 13433117 intron CG42784 + chr2L_10_13430001 chr2L_13430001 RAL-301_75b 302 chr2L 13449467 13449487 chr2L 13456903 13456923 Quasimodo 5 7436 5.0 3.5 4.2 1.0 7456 chr2L 13449467 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453195 intron CG42784 + chr2L 13456923 intron CG42784 + chr2L_5_13450001 chr2L_13450001 RAL-301_75b 303 chr2L 13460164 13460199 chr2L 13460257 13460291 13 92 5.5 7.5 6.5 1.7 127 chr2L 13460164 intron,3` UTR CG42784 +,CG42810 + chr2L 13460228 intron CG42784 + chr2L 13460291 intron CG42784 + chr2L_13_13460001 chr2L_13460001 RAL-301_75b 304 chr2L 13481449 13481474 chr2L 13482056 13482081 jockey 9 607 4.5 4.0 4.2 1.7 632 chr2L 13481449 intron CG42784 + chr2L 13481765 intron CG42784 + chr2L 13482081 intron CG42784 + chr2L_9_13480001 chr2L_13480001 RAL-301_75b 305 chr2L 13560403 13560414 chr2L 13565223 13565235 F-element 5 4820 4.0 2.0 3.0 1.2 4832 chr2L 13560403 intron kuz + chr2L 13562819 intron kuz + chr2L 13565235 intron kuz + chr2L_5_13560001 chr2L_13560001 RAL-301_75b 306 chr2L 13622138 13622170 chr2L 13622237 13622269 6 97 0.0 0.0 0.0 6.0 131 chr2L 13622138 intron kuz + chr2L 13622204 intron kuz + chr2L 13622269 intron kuz + chr2L_6_13620001 chr2L_13620001 RAL-301_75b 307 chr2L 13629584 13629598 chr2L 13629660 13629675 8 77 3.5 8.0 5.8 1.2 91 chr2L 13629584 intron kuz + chr2L 13629630 intron kuz + chr2L 13629675 intron kuz + chr2L_8_13625001 chr2L_13625001 RAL-301_75b 308 chr2L 13677940 13677961 chr2L 13678020 13678040 7 80 2.5 4.0 3.2 1.7 100 chr2L 13677940 3` UTR CG31814 - chr2L 13677990 3` UTR CG31814 - chr2L 13678040 3` UTR CG31814 - chr2L_7_13675001 chr2L_13675001 RAL-301_75b 309 chr2L 13684279 13684290 chr2L 13684355 13684366 5 76 0.0 4.0 2.0 1.7 87 chr2L 13684279 intron CG31814 - chr2L 13684322 intron CG31814 - chr2L 13684366 intron CG31814 - chr2L_5_13680001 chr2L_13680001 RAL-301_75b 310 chr2L 13712377 13712412 chr2L 13712470 13712504 14 93 7.0 4.5 5.8 2.1 127 chr2L 13712377 intron CG31814 - chr2L 13712440 intron CG31814 - chr2L 13712504 intron CG31814 - chr2L_14_13710001 chr2L_13710001 RAL-301_75b 311 chr2L 13761804 13761832 chr2L 13762912 13762942 Doc 8 1110 3.0 5.5 4.2 1.5 1138 chr2L 13761804 intron TM9SF4 + chr2L 13762373 intron TM9SF4 + chr2L 13762942 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 RAL-301_75b 312 chr2L 13842135 13842161 chr2L 13842218 13842245 9 84 3.5 4.0 3.8 1.9 110 chr2L 13842135 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842245 intron CenG1A + chr2L_9_13840001 chr2L_13840001 RAL-301_75b 313 chr2L 13853088 13853114 chr2L 13862238 13862264 roo 6 9150 3.0 3.5 3.2 1.4 9176 chr2L 13853088 intron CenG1A + chr2L 13857676 intron CenG1A + chr2L 13862264 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-301_75b 314 chr2L 13914815 13914842 chr2L 13914895 13914922 9 79 6.0 8.0 7.0 1.1 107 chr2L 13914815 5` UTR Ance-3 + chr2L 13914868 5` UTR Ance-3 + chr2L 13914922 5` UTR Ance-3 + chr2L_9_13910001 chr2L_13910001 RAL-301_75b 315 chr2L 13972663 13972677 chr2L 13972750 13972764 4 87 0.5 8.0 4.2 0.8 101 chr2L 13972663 intron He - chr2L 13972714 intron He - chr2L 13972764 intron He - chr2L_4_13970001 chr2L_13970001 RAL-301_75b 316 chr2L 13988288 13988303 chr2L 13988375 13988390 9 87 6.5 5.0 5.8 1.3 102 chr2L 13988288 intron rk - chr2L 13988339 intron rk - chr2L 13988390 intron rk - chr2L_9_13985001 chr2L_13985001 RAL-301_75b 317 chr2L 14073183 14073215 chr2L 14073439 14073471 4 256 9.5 9.0 9.2 0.4 288 chr2L 14073183 intron nAChRalpha5 + chr2L 14073327 intron nAChRalpha5 + chr2L 14073471 intron nAChRalpha5 + chr2L_4_14070001 chr2L_14070001 RAL-301_75b 318 chr2L 14096159 14096169 chr2L 14096249 14096259 8 89 9.5 0.0 4.8 1.4 100 chr2L 14096159 intergenic not near genes chr2L 14096209 intergenic not near genes chr2L 14096259 intergenic not near genes chr2L_8_14095001 chr2L_14095001 RAL-301_75b 319 chr2L 14118660 14118690 chr2L 14118759 14118789 6 99 8.5 3.5 6.0 0.9 129 chr2L 14118660 intergenic not near genes chr2L 14118724 intergenic not near genes chr2L 14118789 intergenic not near genes chr2L_6_14115001 chr2L_14115001 RAL-301_75b 320 chr2L 14135230 14135260 chr2L 14135311 14135341 15 81 5.0 8.5 6.8 1.9 111 chr2L 14135230 intron CG17341 + chr2L 14135286 intron CG17341 + chr2L 14135341 intron CG17341 + chr2L_15_14135001 chr2L_14135001 RAL-301_75b 321 chr2L 14149716 14149751 chr2L 14149793 14149827 17 77 6.0 4.0 5.0 2.8 111 chr2L 14149716 intron CG17341 + chr2L 14149772 intron CG17341 + chr2L 14149827 intron CG17341 + chr2L_17_14145001 chr2L_14145001 RAL-301_75b 322 chr2L 14160687 14160719 chr2L 14160773 14160803 13 85 6.0 5.0 5.5 2.0 116 chr2L 14160687 intergenic CG17341 +,CG43332 - chr2L 14160745 intergenic CG17341 +,CG43332 - chr2L 14160803 intergenic CG17341 +,CG43332 - chr2L_13_14160001 chr2L_14160001 RAL-301_75b 323 chr2L 14268593 14268596 chr2L 14268670 14268673 4 77 3.5 5.0 4.2 0.8 80 chr2L 14268593 intron wb + chr2L 14268633 intron wb + chr2L 14268673 intron wb + chr2L_4_14265001 chr2L_14265001 RAL-301_75b 324 chr2L 14307904 14307909 chr2L 14307990 14307995 5 86 2.5 6.0 4.2 1.0 91 chr2L 14307904 intron wb + chr2L 14307950 intron wb + chr2L 14307995 intron wb + chr2L_5_14305001 chr2L_14305001 RAL-301_75b 325 chr2L 14374779 14374802 chr2L 14374870 14374893 8 91 5.5 10.5 8.0 0.9 114 chr2L 14374779 intergenic not near genes chr2L 14374836 intergenic not near genes chr2L 14374893 intergenic not near genes chr2L_8_14370001 chr2L_14370001 RAL-301_75b 326 chr2L 14391936 14391945 chr2L 14392012 14392022 5 77 2.0 6.0 4.0 1.0 86 chr2L 14391936 exon elB - chr2L 14391979 intron elB - chr2L 14392022 intron elB - chr2L_5_14390001 chr2L_14390001 RAL-301_75b 327 chr2L 14427512 14427537 chr2L 14427603 14427628 4 91 6.5 3.5 5.0 0.7 116 chr2L 14427512 intergenic not near genes chr2L 14427570 intergenic not near genes chr2L 14427628 intergenic not near genes chr2L_4_14425001 chr2L_14425001 RAL-301_75b 328 chr2L 14588385 14588414 chr2L 14588539 14588568 9 154 3.5 3.5 3.5 2.0 183 chr2L 14588385 intergenic CG42680 - chr2L 14588476 intergenic CG42680 - chr2L 14588568 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 RAL-301_75b 329 chr2L 14617903 14617925 chr2L 14617983 14618004 7 80 2.5 3.5 3.0 1.8 101 chr2L 14617903 intron,intron,intron osp -,Adh +,Adhr + chr2L 14617954 intron,intron,intron osp -,Adh +,Adhr + chr2L 14618004 intron,intron,intron osp -,Adh +,Adhr + chr2L_7_14615001 chr2L_14615001 RAL-301_75b 330 chr2L 14707215 14707239 chr2L 14707334 14707357 5 119 6.5 2.0 4.2 1.0 142 chr2L 14707215 intergenic not near genes chr2L 14707286 intergenic not near genes chr2L 14707357 intergenic not near genes chr2L_5_14705001 chr2L_14705001 RAL-301_75b 331 chr2L 14715536 14715544 chr2L 14715627 14715635 8 91 14.0 2.0 8.0 0.9 99 chr2L 14715536 intergenic not near genes chr2L 14715586 intergenic not near genes chr2L 14715635 intergenic not near genes chr2L_8_14715001 chr2L_14715001 RAL-301_75b 332 chr2L 14769888 14769917 chr2L 14769970 14769999 11 81 5.0 6.5 5.8 1.6 111 chr2L 14769888 intergenic not near genes chr2L 14769944 intergenic not near genes chr2L 14769999 intergenic not near genes chr2L_11_14765001 chr2L_14765001 RAL-301_75b 333 chr2L 14774236 14774246 chr2L 14774453 14774462 10 217 12.0 5.0 8.5 1.1 226 chr2L 14774236 3` UTR CG4650 - chr2L 14774349 3` UTR CG4650 - chr2L 14774462 intron CG4650 - chr2L_10_14770001 chr2L_14770001 RAL-301_75b 334 chr2L 14803886 14803892 chr2L 14809089 14809095 copia 11 5203 3.5 3.0 3.2 2.6 5209 chr2L 14803886 intergenic not near genes chr2L 14806490 intergenic not near genes chr2L 14809095 intergenic not near genes chr2L_11_14805001 chr2L_14805001 RAL-301_75b 335 chr2L 14840977 14840999 chr2L 14841064 14841086 10 87 3.0 3.5 3.2 2.4 109 chr2L 14840977 3` UTR CR43805 - chr2L 14841032 3` UTR CR43805 - chr2L 14841086 3` UTR CR43805 - chr2L_10_14840001 chr2L_14840001 RAL-301_75b 336 chr2L 14854962 14854985 chr2L 14855040 14855063 5 78 5.0 3.5 4.2 1.0 101 chr2L 14854962 intergenic not near genes chr2L 14855012 intergenic not near genes chr2L 14855063 intergenic not near genes chr2L_5_14855001 chr2L_14855001 RAL-301_75b 337 chr2L 14889951 14889987 chr2L 14890376 14890412 jockey 10 425 2.5 3.0 2.8 2.6 461 chr2L 14889951 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890412 intergenic not near genes chr2L_10_14890001 chr2L_14890001 RAL-301_75b 338 chr2L 14900634 14900649 chr2L 14900945 14900958 6 310 13.5 9.0 11.2 0.5 324 chr2L 14900634 intergenic not near genes chr2L 14900796 intergenic not near genes chr2L 14900958 intergenic not near genes chr2L_6_14900001 chr2L_14900001 RAL-301_75b 339 chr2L 15078068 15078101 chr2L 15078156 15078189 16 88 2.0 1.0 1.5 6.4 121 chr2L 15078068 intron CG15270 + chr2L 15078128 intron CG15270 + chr2L 15078189 intron CG15270 + chr2L_16_15075001 chr2L_15075001 RAL-301_75b 340 chr2L 15082663 15082692 chr2L 15082757 15082786 5 94 10.5 10.0 10.2 0.4 123 chr2L 15082663 intron CG15270 + chr2L 15082724 intron CG15270 + chr2L 15082786 intron CG15270 + chr2L_5_15080001 chr2L_15080001 RAL-301_75b 341 chr2L 15159579 15159604 chr2L 15159706 15159731 6 127 18.5 14.0 16.2 0.3 152 chr2L 15159579 3` UTR CR44771 - chr2L 15159655 3` UTR CR44771 - chr2L 15159731 3` UTR CR44771 - chr2L_6_15155001 chr2L_15155001 RAL-301_75b 342 chr2L 15170629 15170655 chr2L 15170721 15170748 16 93 9.5 5.0 7.2 2.0 119 chr2L 15170629 intron CG4168 - chr2L 15170688 intron CG4168 - chr2L 15170748 intron CG4168 - chr2L_16_15170001 chr2L_15170001 RAL-301_75b 343 chr2L 15181796 15181813 chr2L 15181919 15181936 5 123 8.0 8.5 8.2 0.5 140 chr2L 15181796 intron CG4168 - chr2L 15181866 intron CG4168 - chr2L 15181936 intron CG4168 - chr2L_5_15180001 chr2L_15180001 RAL-301_75b 344 chr2L 15244047 15244052 chr2L 15244160 15244165 5 113 0.5 5.5 3.0 1.2 118 chr2L 15244047 intron ZnT35C - chr2L 15244106 intron ZnT35C - chr2L 15244165 intron ZnT35C - chr2L_5_15240001 chr2L_15240001 RAL-301_75b 345 chr2L 15350906 15350926 chr2L 15350989 15351010 6 84 3.0 5.5 4.2 1.2 104 chr2L 15350906 intergenic not near genes chr2L 15350958 intergenic not near genes chr2L 15351010 intergenic not near genes chr2L_6_15350001 chr2L_15350001 RAL-301_75b 346 chr2L 15354766 15354955 chr2L 15354853 15355044 8 88 5.0 2.0 3.5 1.8 278 chr2L 15354766 intergenic not near genes chr2L 15354905 intergenic not near genes chr2L 15355044 intergenic not near genes chr2L_8_15350001 chr2L_15350001 RAL-301_75b 347 chr2L 15439275 15439308 chr2L 15439363 15439396 7 88 1.5 1.5 1.5 2.8 121 chr2L 15439275 intergenic not near genes chr2L 15439336 intergenic not near genes chr2L 15439396 intergenic not near genes chr2L_7_15435001 chr2L_15435001 RAL-301_75b 348 chr2L 15446056 15446081 chr2L 15453525 15453548 blood 8 7469 1.5 2.0 1.8 2.9 7492 chr2L 15446056 intergenic not near genes chr2L 15449802 intergenic not near genes chr2L 15453548 intergenic not near genes chr2L_8_15445001 chr2L_15445001 RAL-301_75b 349 chr2L 15483283 15483301 chr2L 15483369 15483385 6 85 8.0 7.0 7.5 0.7 102 chr2L 15483283 intergenic not near genes chr2L 15483334 intergenic not near genes chr2L 15483385 intergenic not near genes chr2L_6_15480001 chr2L_15480001 RAL-301_75b 350 chr2L 15586407 15586441 chr2L 15593463 15593489 297 4 7052 2.5 1.5 2.0 1.3 7082 chr2L 15586407 intergenic not near genes chr2L 15589948 intergenic not near genes chr2L 15593489 intergenic not near genes chr2L_4_15585001 chr2L_15585001 RAL-301_75b 351 chr2L 15790186 15790218 chr2L 15790262 15790329 9 91 1.0 0.5 0.8 5.0 143 chr2L 15790186 intergenic CG18109 + chr2L 15790258 intergenic CG18109 + chr2L 15790329 intergenic CG18109 + chr2L_9_15790001 chr2L_15790001 RAL-301_75b 352 chr2L 15837144 15837157 chr2L 15837233 15837246 5 89 6.0 7.5 6.8 0.6 102 chr2L 15837144 intergenic not near genes chr2L 15837195 intergenic not near genes chr2L 15837246 intergenic not near genes chr2L_5_15835001 chr2L_15835001 RAL-301_75b 353 chr2L 15939202 15939221 chr2L 15939281 15939297 9 78 1.5 4.0 2.8 2.4 95 chr2L 15939202 intron beat-Ib - chr2L 15939250 intron beat-Ib - chr2L 15939297 intron beat-Ib - chr2L_9_15935001 chr2L_15935001 RAL-301_75b 354 chr2L 15950384 15950411 chr2L 15950462 15950489 6 78 2.5 4.0 3.2 1.4 105 chr2L 15950384 intron beat-Ib - chr2L 15950436 intron beat-Ib - chr2L 15950489 intron beat-Ib - chr2L_6_15950001 chr2L_15950001 RAL-301_75b 355 chr2L 15956024 15956057 chr2L 15957490 15957523 hobo 15 1467 3.0 2.5 2.8 3.9 1499 chr2L 15956024 intron beat-Ib - chr2L 15956774 intron beat-Ib - chr2L 15957523 intron beat-Ib - chr2L_15_15955001 chr2L_15955001 RAL-301_75b 356 chr2L 15971982 15972001 chr2L 15972080 15972099 4 98 0.0 2.5 1.2 1.8 117 chr2L 15971982 intergenic not near genes chr2L 15972040 intergenic not near genes chr2L 15972099 intergenic not near genes chr2L_4_15970001 chr2L_15970001 RAL-301_75b 357 chr2L 10176023 10176023 chr2L 16071771 16071771 4 5895748 14.0 14.5 14.2 0.3 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_13120001 chr2L_13120001 RAL-301_75b 358 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 5 145889 17.5 10.0 13.8 0.3 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-301_75b 359 chr2L 16078525 16078545 chr2L 16078603 16078625 5 79 4.5 7.5 6.0 0.7 100 chr2L 16078525 intron beat-Ia + chr2L 16078575 intron beat-Ia + chr2L 16078625 intron beat-Ia + chr2L_5_16075001 chr2L_16075001 RAL-301_75b 360 chr2L 16082326 16082355 chr2L 16082411 16082440 15 85 2.5 4.5 3.5 3.3 114 chr2L 16082326 intergenic not near genes chr2L 16082383 intergenic not near genes chr2L 16082440 intergenic not near genes chr2L_15_16080001 chr2L_16080001 RAL-301_75b 361 chr2L 16098923 16098942 chr2L 16099011 16099029 12 87 3.5 6.5 5.0 2.0 106 chr2L 16098923 intergenic not near genes chr2L 16098976 intergenic not near genes chr2L 16099029 intergenic not near genes chr2L_12_16095001 chr2L_16095001 RAL-301_75b 362 chr2L 16141169 16141192 chr2L 16146376 16146399 copia 10 5207 1.0 3.0 2.0 3.3 5230 chr2L 16141169 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146399 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-301_75b 363 chr2L 16146698 16146730 chr2L 16146780 16146813 6 82 2.5 4.5 3.5 1.3 115 chr2L 16146698 intergenic not near genes chr2L 16146756 intergenic not near genes chr2L 16146813 intergenic not near genes chr2L_6_16145001 chr2L_16145001 RAL-301_75b 364 chr2L 9084337 9084340 chr2L 16217660 16217660 5 7133321 13.5 10.0 11.8 0.4 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-301_75b 365 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 17.5 10.0 13.8 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-301_75b 366 chr2L 16226190 16226203 chr2L 16226277 16226289 11 86 6.5 6.5 6.5 1.5 99 chr2L 16226190 intergenic not near genes chr2L 16226240 intergenic not near genes chr2L 16226289 intergenic not near genes chr2L_11_16225001 chr2L_16225001 RAL-301_75b 367 chr2L 16243695 16243854 chr2L 16243778 16243949 10 91 2.5 2.5 2.5 2.9 254 chr2L 16243695 exon CG42818 + chr2L 16243822 exon CG42818 + chr2L 16243949 exon CG42818 + chr2L_10_16240001 chr2L_16240001 RAL-301_75b 368 chr2L 16309271 16309297 chr2L 16309360 16309386 7 89 4.0 7.0 5.5 1.1 115 chr2L 16309271 3` UTR Syx5 + chr2L 16309328 3` UTR cni - chr2L 16309386 3` UTR cni - chr2L_7_16305001 chr2L_16305001 RAL-301_75b 369 chr2L 16363945 16363974 chr2L 16364191 16364220 5 246 6.0 4.0 5.0 0.8 275 chr2L 16363945 intergenic not near genes chr2L 16364082 intergenic not near genes chr2L 16364220 intergenic not near genes chr2L_5_16360001 chr2L_16360001 RAL-301_75b 370 chr2L 16394928 16394942 chr2L 16395011 16395025 5 85 0.0 5.0 2.5 1.4 97 chr2L 16394928 intergenic not near genes chr2L 16394976 intergenic not near genes chr2L 16395025 intergenic not near genes chr2L_5_16390001 chr2L_16390001 RAL-301_75b 371 chr2L 16505002 16505011 chr2L 16505111 16505121 11 109 2.0 5.0 3.5 2.4 119 chr2L 16505002 intron Tpr2 + chr2L 16505062 intron Tpr2 + chr2L 16505121 intron Tpr2 + chr2L_11_16505001 chr2L_16505001 RAL-301_75b 372 chr2L 16511964 16511968 chr2L 16519171 16519175 HMS-Beagle 4 7207 6.0 8.0 7.0 0.5 7211 chr2L 16511964 intron CG5953 - chr2L 16515570 intron CG5953 - chr2L 16519175 intron CG5953 - chr2L_4_16515001 chr2L_16515001 RAL-301_75b 373 chr2L 16537332 16537357 chr2L 16537408 16537433 9 76 2.0 3.5 2.8 2.4 101 chr2L 16537332 intergenic not near genes chr2L 16537382 intergenic not near genes chr2L 16537433 intergenic not near genes chr2L_9_16535001 chr2L_16535001 RAL-301_75b 374 chr2L 16550653 16550679 chr2L 16550729 16550755 8 76 14.0 13.0 13.5 0.6 102 chr2L 16550653 intron CG42389 + chr2L 16550704 intron CG42389 + chr2L 16550755 intron CG42389 + chr2L_8_16550001 chr2L_16550001 RAL-301_75b 375 chr2L 16583094 16583127 chr2L 16583182 16583215 7 88 4.0 4.0 4.0 1.4 121 chr2L 16583094 intron CG42389 + chr2L 16583154 intron CG42389 + chr2L 16583215 intron CG42389 + chr2L_7_16580001 chr2L_16580001 RAL-301_75b 376 chr2L 16583572 16583580 chr2L 16583706 16583714 4 134 6.0 8.0 7.0 0.5 142 chr2L 16583572 intron CG42389 + chr2L 16583643 intron CG42389 + chr2L 16583714 intron CG42389 + chr2L_4_16580001 chr2L_16580001 RAL-301_75b 377 chr2L 16670433 16670445 chr2L 16670508 16670522 8 76 3.5 3.5 3.5 1.8 89 chr2L 16670433 intron Trpgamma - chr2L 16670478 intron Trpgamma - chr2L 16670522 intron Trpgamma - chr2L_8_16670001 chr2L_16670001 RAL-301_75b 378 chr2L 16728925 16728956 chr2L 16729560 16729591 7 635 4.0 7.5 5.8 1.0 666 chr2L 16728925 intergenic not near genes chr2L 16729258 intergenic not near genes chr2L 16729591 intergenic CG31812 + chr2L_7_16725001 chr2L_16725001 RAL-301_75b 379 chr2L 16949623 16949625 chr2L 16949707 16949709 4 84 9.5 8.5 9.0 0.4 86 chr2L 16949623 intron CR44393 - chr2L 16949666 intron CR44393 - chr2L 16949709 intron CR44393 - chr2L_4_16945001 chr2L_16945001 RAL-301_75b 380 chr2L 16952137 16952155 chr2L 16952223 16952239 7 85 2.0 4.0 3.0 1.8 102 chr2L 16952137 intergenic not near genes chr2L 16952188 intergenic not near genes chr2L 16952239 intergenic not near genes chr2L_7_16950001 chr2L_16950001 RAL-301_75b 381 chr2L 16958104 16958125 chr2L 16962892 16962913 Doc 7 4788 4.5 3.0 3.8 1.5 4809 chr2L 16958104 intergenic not near genes chr2L 16960508 intergenic not near genes chr2L 16962913 intergenic not near genes chr2L_7_16960001 chr2L_16960001 RAL-301_75b 382 chr2L 17005412 17005431 chr2L 17005509 17005528 9 95 1.5 2.5 2.0 3.0 116 chr2L 17005412 intergenic not near genes chr2L 17005470 intergenic not near genes chr2L 17005528 intergenic not near genes chr2L_9_17005001 chr2L_17005001 RAL-301_75b 383 chr2L 17033922 17033937 chr2L 17034008 17034019 8 85 7.0 9.0 8.0 0.9 97 chr2L 17033922 intergenic not near genes chr2L 17033970 intergenic not near genes chr2L 17034019 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-301_75b 384 chr2L 17158733 17158757 chr2L 17158836 17158860 5 103 1.0 2.0 1.5 2.0 127 chr2L 17158733 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158796 intron,intron CG34106 +,beat-IIIa + chr2L 17158860 intron,intron CG34106 +,beat-IIIa + chr2L_5_17155001 chr2L_17155001 RAL-301_75b 385 chr2L 17167578 17167594 chr2L 17167818 17167835 pogo 9 241 2.0 3.5 2.8 2.4 257 chr2L 17167578 intron,intron CG34106 +,beat-IIIa + chr2L 17167706 intron,intron CG34106 +,beat-IIIa + chr2L 17167835 intron,intron CG34106 +,beat-IIIa + chr2L_9_17165001 chr2L_17165001 RAL-301_75b 386 chr2L 17199161 17199194 chr2L 17200628 17200661 hobo 10 1467 2.0 3.5 2.8 2.6 1500 chr2L 17199161 intron beat-IIIc - chr2L 17199911 intron beat-IIIc - chr2L 17200661 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-301_75b 387 chr2L 17264745 17264771 chr2L 17264823 17264851 8 79 5.5 5.5 5.5 1.2 106 chr2L 17264745 intergenic not near genes chr2L 17264798 intergenic not near genes chr2L 17264851 intergenic not near genes chr2L_8_17260001 chr2L_17260001 RAL-301_75b 388 chr2L 17273190 17273226 chr2L 17277972 17278009 F-element 9 4782 3.0 2.5 2.8 2.4 4819 chr2L 17273190 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278009 intergenic not near genes chr2L_9_17275001 chr2L_17275001 RAL-301_75b 389 chr2L 17289237 17289261 chr2L 17289315 17289340 5 78 4.5 3.0 3.8 1.0 103 chr2L 17289237 intergenic not near genes chr2L 17289288 intergenic not near genes chr2L 17289340 intergenic not near genes chr2L_5_17285001 chr2L_17285001 RAL-301_75b 390 chr2L 17327913 17327914 chr2L 17327999 17328000 4 86 4.0 3.0 3.5 0.9 87 chr2L 17327913 intergenic not near genes chr2L 17327956 intergenic not near genes chr2L 17328000 intergenic not near genes chr2L_4_17325001 chr2L_17325001 RAL-301_75b 391 chr2L 17328459 17328492 chr2L 17328559 17328592 5 100 5.5 8.0 6.8 0.6 133 chr2L 17328459 intergenic not near genes chr2L 17328526 intergenic not near genes chr2L 17328592 intergenic not near genes chr2L_5_17325001 chr2L_17325001 RAL-301_75b 392 chr2L 17329073 17329105 chr2L 17329201 17329233 11 127 4.0 8.0 6.0 1.6 160 chr2L 17329073 intergenic not near genes chr2L 17329153 intergenic not near genes chr2L 17329233 intergenic not near genes chr2L_11_17325001 chr2L_17325001 RAL-301_75b 393 chr2L 17344747 17344765 chr2L 17344856 17344874 6 109 6.5 8.5 7.5 0.7 127 chr2L 17344747 intergenic not near genes chr2L 17344810 intergenic not near genes chr2L 17344874 intergenic not near genes chr2L_6_17340001 chr2L_17340001 RAL-301_75b 394 chr2L 17348352 17348375 chr2L 17348596 17348621 11 246 4.0 5.5 4.8 1.9 269 chr2L 17348352 intergenic not near genes chr2L 17348486 intergenic not near genes chr2L 17348621 intergenic not near genes chr2L_11_17345001 chr2L_17345001 RAL-301_75b 395 chr2L 17397999 17398010 chr2L 17398088 17398100 7 89 6.5 8.5 7.5 0.8 101 chr2L 17397999 intron CLIP-190 + chr2L 17398050 intron CLIP-190 + chr2L 17398100 intron CLIP-190 + chr2L_7_17395001 chr2L_17395001 RAL-301_75b 396 chr2L 17432639 17432653 chr2L 17432714 17432729 6 76 8.0 8.0 8.0 0.7 90 chr2L 17432639 intron Dif - chr2L 17432684 intron Dif - chr2L 17432729 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-301_75b 397 chr2L 17491083 17491089 chr2L 17491161 17491171 4 80 2.0 3.0 2.5 1.1 88 chr2L 17491083 intron qua - chr2L 17491127 intron qua - chr2L 17491171 intron qua - chr2L_4_17490001 chr2L_17490001 RAL-301_75b 398 chr2L 17503221 17503252 chr2L 17503298 17503327 13 76 4.0 4.5 4.2 2.5 106 chr2L 17503221 intron Dhc36C + chr2L 17503274 intron Dhc36C + chr2L 17503327 intron Dhc36C + chr2L_13_17500001 chr2L_17500001 RAL-301_75b 399 chr2L 17533436 17533443 chr2L 17533523 17533530 4 86 3.0 0.5 1.8 1.4 94 chr2L 17533436 intergenic not near genes chr2L 17533483 intergenic not near genes chr2L 17533530 intergenic not near genes chr2L_4_17530001 chr2L_17530001 RAL-301_75b 400 chr2L 17584099 17584122 chr2L 17584887 17584909 9 788 9.5 6.5 8.0 1.0 810 chr2L 17584099 5` UTR CR45111 + chr2L 17584504 intergenic CR45111 +,CR45112 - chr2L 17584909 3` UTR CR45112 - chr2L_9_17580001 chr2L_17580001 RAL-301_75b 401 chr2L 17583877 17583910 chr2L 17584818 17584850 5 940 20.5 9.0 14.8 0.3 973 chr2L 17583877 intergenic CR45111 + chr2L 17584364 5` UTR CR45111 + chr2L 17584850 3` UTR CR45112 - chr2L_5_17580001 chr2L_17580001 RAL-301_75b 402 chr2L 17687516 17687522 chr2L 17692261 17692267 F-element 6 4745 3.0 2.5 2.8 1.6 4751 chr2L 17687516 intron CadN - chr2L 17689892 intron CadN - chr2L 17692267 intron CadN - chr2L_6_17685001 chr2L_17685001 RAL-301_75b 403 chr2L 17724922 17724928 chr2L 17725013 17725019 4 91 14.5 7.5 11.0 0.3 97 chr2L 17724922 intron CadN - chr2L 17724970 intron CadN - chr2L 17725019 intron CadN - chr2L_4_17720001 chr2L_17720001 RAL-301_75b 404 chr2L 17747999 17748028 chr2L 17748076 17748105 16 77 8.0 8.0 8.0 1.8 106 chr2L 17747999 intron CadN - chr2L 17748052 intron CadN - chr2L 17748105 intron CadN - chr2L_16_17745001 chr2L_17745001 RAL-301_75b 405 chr2L 17819920 17819939 chr2L 17825124 17825139 copia 9 5203 3.5 3.0 3.2 2.1 5219 chr2L 17819920 intron CadN2 - chr2L 17822530 intron CadN2 - chr2L 17825139 intron CadN2 - chr2L_9_17820001 chr2L_17820001 RAL-301_75b 406 chr2L 17828244 17828250 chr2L 17828347 17828354 4 104 12.5 10.0 11.2 0.3 110 chr2L 17828244 intron CadN2 - chr2L 17828299 intron CadN2 - chr2L 17828354 intron CadN2 - chr2L_4_17825001 chr2L_17825001 RAL-301_75b 407 chr2L 17880002 17880030 chr2L 17880087 17880117 12 87 6.0 5.0 5.5 1.8 115 chr2L 17880002 intergenic not near genes chr2L 17880060 intergenic not near genes chr2L 17880117 intergenic not near genes chr2L_12_17880001 chr2L_17880001 RAL-301_75b 408 chr2L 17944416 17944443 chr2L 17944579 17944606 5 163 6.5 8.5 7.5 0.6 190 chr2L 17944416 intergenic not near genes chr2L 17944511 intergenic not near genes chr2L 17944606 intergenic not near genes chr2L_5_17940001 chr2L_17940001 RAL-301_75b 409 chr2L 17951946 17951977 chr2L 17953413 17953444 hobo 14 1467 6.5 4.0 5.2 2.3 1498 chr2L 17951946 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953444 intergenic not near genes chr2L_14_17950001 chr2L_17950001 RAL-301_75b 410 chr2L 18020753 18020773 chr2L 18020840 18020860 6 87 14.5 13.0 13.8 0.4 107 chr2L 18020753 intron rdo + chr2L 18020806 intron rdo + chr2L 18020860 intron rdo + chr2L_6_18020001 chr2L_18020001 RAL-301_75b 411 chr2L 18051873 18051909 chr2L 18061020 18061056 roo 11 9147 2.0 3.5 2.8 2.9 9183 chr2L 18051873 intron rdo + chr2L 18056464 intron rdo + chr2L 18061056 intron rdo + chr2L_11_18055001 chr2L_18055001 RAL-301_75b 412 chr2L 18103041 18103061 chr2L 18103128 18103147 6 86 2.0 5.0 3.5 1.3 106 chr2L 18103041 intergenic not near genes chr2L 18103094 intergenic not near genes chr2L 18103147 intergenic not near genes chr2L_6_18100001 chr2L_18100001 RAL-301_75b 413 chr2L 18148827 18148854 chr2L 18148923 18148950 12 96 9.5 9.0 9.2 1.2 123 chr2L 18148827 intron Socs36E - chr2L 18148888 intron Socs36E - chr2L 18148950 intron Socs36E - chr2L_12_18145001 chr2L_18145001 RAL-301_75b 414 chr2L 18185005 18185024 chr2L 18185123 18185142 5 118 4.0 3.0 3.5 1.1 137 chr2L 18185005 intron,5` UTR CG42750 -,CG7180 - chr2L 18185074 intron CG42750 - chr2L 18185142 intron CG42750 - chr2L_5_18185001 chr2L_18185001 RAL-301_75b 415 chr2L 18218613 18218629 chr2L 18218700 18218717 7 88 5.5 6.0 5.8 1.0 104 chr2L 18218613 intron CG42750 - chr2L 18218665 intron CG42750 - chr2L 18218717 intron CG42750 - chr2L_7_18215001 chr2L_18215001 RAL-301_75b 416 chr2L 18264063 18264078 chr2L 18264139 18264155 9 77 3.0 1.0 2.0 3.0 92 chr2L 18264063 intron CG42750 - chr2L 18264109 intron CG42750 - chr2L 18264155 intron CG42750 - chr2L_9_18260001 chr2L_18260001 RAL-301_75b 417 chr2L 18274046 18274074 chr2L 18274132 18274160 7 85 6.5 11.0 8.8 0.7 114 chr2L 18274046 intron CG42750 - chr2L 18274103 intron CG42750 - chr2L 18274160 intron CG42750 - chr2L_7_18270001 chr2L_18270001 RAL-301_75b 418 chr2L 18281772 18281801 chr2L 18281866 18281896 13 94 9.5 8.0 8.8 1.3 124 chr2L 18281772 intergenic not near genes chr2L 18281834 intergenic not near genes chr2L 18281896 intergenic not near genes chr2L_13_18280001 chr2L_18280001 RAL-301_75b 419 chr2L 18291528 18291553 chr2L 18291626 18291648 7 98 3.0 0.5 1.8 2.5 120 chr2L 18291528 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291588 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291648 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_7_18290001 chr2L_18290001 RAL-301_75b 420 chr2L 18408028 18408056 chr2L 18412812 18412840 Doc 13 4784 2.5 1.5 2.0 4.3 4812 chr2L 18408028 intergenic not near genes chr2L 18410434 intergenic not near genes chr2L 18412840 intergenic not near genes chr2L_13_18410001 chr2L_18410001 RAL-301_75b 421 chr2L 18415144 18415174 chr2L 18416882 18416912 5 1738 14.0 19.5 16.8 0.3 1768 chr2L 18415144 intergenic not near genes chr2L 18416028 intergenic not near genes chr2L 18416912 intergenic not near genes chr2L_5_18415001 chr2L_18415001 RAL-301_75b 422 chr2L 18541735 18541751 chr2L 18541811 18541827 6 76 2.5 3.5 3.0 1.5 92 chr2L 18541735 intron Pde11 - chr2L 18541781 intron Pde11 - chr2L 18541827 intron Pde11 - chr2L_6_18540001 chr2L_18540001 RAL-301_75b 423 chr2L 18561558 18561572 chr2L 18561650 18561673 6 95 4.0 1.0 2.5 1.7 115 chr2L 18561558 intron Pde11 - chr2L 18561616 intron Pde11 - chr2L 18561673 intron Pde11 - chr2L_6_18560001 chr2L_18560001 RAL-301_75b 424 chr2L 18816734 18816775 chr2L 18816866 18816907 14 132 2.5 3.0 2.8 3.7 173 chr2L 18816734 intergenic not near genes chr2L 18816820 intergenic not near genes chr2L 18816907 intergenic not near genes chr2L_14_18815001 chr2L_18815001 RAL-301_75b 425 chr2L 18898397 18898422 chr2L 18898479 18898504 9 82 3.0 2.5 2.8 2.4 107 chr2L 18898397 intergenic not near genes chr2L 18898450 intergenic not near genes chr2L 18898504 intergenic not near genes chr2L_9_18895001 chr2L_18895001 RAL-301_75b 426 chr2L 18902631 18902646 chr2L 18902912 18902927 8 281 3.5 5.0 4.2 1.5 296 chr2L 18902631 intergenic not near genes chr2L 18902779 intergenic not near genes chr2L 18902927 intergenic not near genes chr2L_8_18900001 chr2L_18900001 RAL-301_75b 427 chr2L 18943153 18943186 chr2L 18943237 18943271 5 85 9.5 5.0 7.2 0.6 118 chr2L 18943153 intron ssp3 - chr2L 18943212 intron ssp3 - chr2L 18943271 intron ssp3 - chr2L_5_18940001 chr2L_18940001 RAL-301_75b 428 chr2L 18962250 18962261 chr2L 18962345 18962356 5 95 0.0 6.0 3.0 1.2 106 chr2L 18962250 intron Nak - chr2L 18962303 intron Nak - chr2L 18962356 intron Nak - chr2L_5_18960001 chr2L_18960001 RAL-301_75b 429 chr2L 18990320 18990341 chr2L 18990431 18990452 13 111 7.5 6.5 7.0 1.6 132 chr2L 18990320 intergenic CG15170 - chr2L 18990386 intergenic CG15170 - chr2L 18990452 intergenic CG15170 - chr2L_13_18990001 chr2L_18990001 RAL-301_75b 430 chr2L 19106374 19106402 chr2L 19106453 19106482 7 79 2.5 2.5 2.5 2.0 108 chr2L 19106374 intron Lim3 - chr2L 19106428 intron Lim3 - chr2L 19106482 intron Lim3 - chr2L_7_19105001 chr2L_19105001 RAL-301_75b 431 chr2L 19121042 19121069 chr2L 19121120 19121147 11 78 8.0 1.5 4.8 1.9 105 chr2L 19121042 intergenic l(2)37Cc - chr2L 19121094 intergenic l(2)37Cc - chr2L 19121147 intergenic l(2)37Cc - chr2L_11_19120001 chr2L_19120001 RAL-301_75b 432 chr2L 19147378 19147399 chr2L 19154413 19154433 297 7 7035 3.0 6.5 4.8 1.2 7055 chr2L 19147378 intron brat + chr2L 19150906 intron brat + chr2L 19154433 intron brat + chr2L_7_19150001 chr2L_19150001 RAL-301_75b 433 chr2L 19163130 19163164 chr2L 19163215 19163248 6 84 5.0 4.5 4.8 1.0 118 chr2L 19163130 intron brat + chr2L 19163189 intron brat + chr2L 19163248 intron brat + chr2L_6_19160001 chr2L_19160001 RAL-301_75b 434 chr2L 19199668 19199707 chr2L 19199744 19199784 10 77 6.5 5.5 6.0 1.4 116 chr2L 19199668 intron drl + chr2L 19199726 intron drl + chr2L 19199784 intron drl + chr2L_10_19195001 chr2L_19195001 RAL-301_75b 435 chr2L 19309100 19309125 chr2L 19309193 19309215 8 92 6.0 10.5 8.2 0.9 115 chr2L 19309100 intergenic not near genes chr2L 19309158 intergenic not near genes chr2L 19309215 intergenic not near genes chr2L_8_19305001 chr2L_19305001 RAL-301_75b 436 chr2L 19345012 19345046 chr2L 19357221 19357255 blood 8 12209 3.0 4.5 3.8 1.7 12243 chr2L 19345012 intron dnt - chr2L 19351134 intron dnt - chr2L 19357255 intron dnt - chr2L_8_19350001 chr2L_19350001 RAL-301_75b 437 chr2L 19357552 19357565 chr2L 19357642 19357655 4 90 2.5 1.5 2.0 1.3 103 chr2L 19357552 intron dnt - chr2L 19357604 intron dnt - chr2L 19357655 intron dnt - chr2L_4_19355001 chr2L_19355001 RAL-301_75b 438 chr2L 19376353 19376362 chr2L 19376737 19376744 5 383 4.5 4.5 4.5 0.9 391 chr2L 19376353 intergenic not near genes chr2L 19376548 intergenic not near genes chr2L 19376744 intergenic not near genes chr2L_5_19375001 chr2L_19375001 RAL-301_75b 439 chr2L 19405624 19405633 chr2L 19405714 19405723 5 89 5.5 6.5 6.0 0.7 99 chr2L 19405624 intron Pax - chr2L 19405674 intron Pax - chr2L 19405723 intron Pax - chr2L_5_19405001 chr2L_19405001 RAL-301_75b 440 chr2L 19407716 19407740 chr2L 19407913 19407937 8 196 11.0 7.0 9.0 0.8 221 chr2L 19407716 intron Pax - chr2L 19407826 intron Pax - chr2L 19407937 intron Pax - chr2L_8_19405001 chr2L_19405001 RAL-301_75b 441 chr2L 19415565 19415599 chr2L 19415753 19415787 11 188 5.0 9.0 7.0 1.4 222 chr2L 19415565 intron Pax - chr2L 19415676 intron Pax - chr2L 19415787 intron Pax - chr2L_11_19415001 chr2L_19415001 RAL-301_75b 442 chr2L 19441067 19441088 chr2L 19441144 19441165 8 77 6.0 4.5 5.2 1.3 98 chr2L 19441067 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441165 5` UTR CG10237 - chr2L_8_19440001 chr2L_19440001 RAL-301_75b 443 chr2L 19469173 19469188 chr2L 19469258 19469273 4 85 9.5 11.0 10.2 0.4 100 chr2L 19469173 5` UTR CR45722 + chr2L 19469223 5` UTR CR45722 + chr2L 19469273 5` UTR CR45722 + chr2L_4_19465001 chr2L_19465001 RAL-301_75b 444 chr2L 19544593 19544620 chr2L 19544669 19544695 11 76 1.5 4.0 2.8 2.9 102 chr2L 19544593 exon ref(2)P + chr2L 19544644 exon ref(2)P + chr2L 19544695 exon ref(2)P + chr2L_11_19540001 chr2L_19540001 RAL-301_75b 445 chr2L 19558525 19558546 chr2L 19558629 19558650 10 104 6.5 4.5 5.5 1.5 125 chr2L 19558525 intron Tep5 + chr2L 19558588 intron Tep5 + chr2L 19558650 intron Tep5 + chr2L_10_19555001 chr2L_19555001 RAL-301_75b 446 chr2L 19560840 19560864 chr2L 19560918 19560944 10 80 7.5 5.5 6.5 1.3 104 chr2L 19560840 intron Tep5 + chr2L 19560892 exon Tep5 + chr2L 19560944 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-301_75b 447 chr2L 19561346 19561350 chr2L 19561486 19561491 6 140 9.0 9.5 9.2 0.6 145 chr2L 19561346 exon Tep5 + chr2L 19561418 exon Tep5 + chr2L 19561491 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-301_75b 448 chr2L 19587793 19587814 chr2L 19587890 19587911 10 97 7.0 4.5 5.8 1.5 118 chr2L 19587793 intron Lar + chr2L 19587852 intron Lar + chr2L 19587911 intron Lar + chr2L_10_19585001 chr2L_19585001 RAL-301_75b 449 chr2L 19601574 19601598 chr2L 19601651 19601675 9 77 5.0 9.0 7.0 1.1 101 chr2L 19601574 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601675 intron,intron Lar +,CR44978 - chr2L_9_19600001 chr2L_19600001 RAL-301_75b 450 chr2L 19608607 19608610 chr2L 19608698 19608701 7 91 2.5 2.0 2.2 2.2 94 chr2L 19608607 intron Lar + chr2L 19608654 intron Lar + chr2L 19608701 intron Lar + chr2L_7_19605001 chr2L_19605001 RAL-301_75b 451 chr2L 19609660 19609667 chr2L 19609750 19609761 4 93 5.5 5.5 5.5 0.6 101 chr2L 19609660 intron Lar + chr2L 19609710 intron Lar + chr2L 19609761 intron Lar + chr2L_4_19605001 chr2L_19605001 RAL-301_75b 452 chr2L 19620090 19620124 chr2L 19621078 19621112 jockey 12 988 3.5 1.5 2.5 3.4 1022 chr2L 19620090 intron Lar + chr2L 19620601 intron Lar + chr2L 19621112 intron Lar + chr2L_12_19620001 chr2L_19620001 RAL-301_75b 453 chr2L 19652570 19652599 chr2L 19674006 19674035 opus 12 21436 2.5 2.0 2.2 3.8 21465 chr2L 19652570 intron Lar + chr2L 19663302 intron Lar + chr2L 19674035 intron Lar + chr2L_12_19660001 chr2L_19660001 RAL-301_75b 454 chr2L 19703534 19703563 chr2L 19712670 19712699 roo 10 9136 5.0 1.5 3.2 2.4 9165 chr2L 19703534 intron Lar + chr2L 19708116 intron Lar + chr2L 19712699 intron Lar + chr2L_10_19705001 chr2L_19705001 RAL-301_75b 455 chr2L 19737359 19737386 chr2L 19740827 19740855 1360 7 3469 2.5 2.5 2.5 2.0 3496 chr2L 19737359 intergenic Nf-YB + chr2L 19739107 intergenic not near genes chr2L 19740855 intergenic not near genes chr2L_7_19735001 chr2L_19735001 RAL-301_75b 456 chr2L 19762829 19762836 chr2L 19763071 19763078 pogo 8 242 3.5 4.0 3.8 1.7 249 chr2L 19762829 intron fbp - chr2L 19762954 intron fbp - chr2L 19763078 intron fbp - chr2L_8_19760001 chr2L_19760001 RAL-301_75b 457 chr2L 19773165 19773190 chr2L 19773252 19773276 6 86 5.5 3.0 4.2 1.2 111 chr2L 19773165 intergenic not near genes chr2L 19773220 intergenic not near genes chr2L 19773276 intergenic not near genes chr2L_6_19770001 chr2L_19770001 RAL-301_75b 458 chr2L 19824421 19824429 chr2L 19824504 19824510 4 82 6.5 6.5 6.5 0.5 89 chr2L 19824421 intron sick + chr2L 19824466 intron sick + chr2L 19824510 intron sick + chr2L_4_19820001 chr2L_19820001 RAL-301_75b 459 chr2L 19837279 19837308 chr2L 19837359 19837388 10 80 7.0 5.0 6.0 1.4 109 chr2L 19837279 intron sick + chr2L 19837334 intron sick + chr2L 19837388 intron sick + chr2L_10_19835001 chr2L_19835001 RAL-301_75b 460 chr2L 19911295 19911303 chr2L 19911383 19911390 4 88 4.0 6.5 5.2 0.6 95 chr2L 19911295 intron,3` UTR sick +,CR43097 - chr2L 19911342 intron,3` UTR sick +,CR43097 - chr2L 19911390 intron,3` UTR sick +,CR43097 - chr2L_4_19910001 chr2L_19910001 RAL-301_75b 461 chr2L 20005873 20005897 chr2L 20010947 20010973 flea 12 5076 10.0 2.5 6.2 1.7 5100 chr2L 20005873 intron CG43861 - chr2L 20008423 intron CG43861 - chr2L 20010973 intron CG43861 - chr2L_12_20005001 chr2L_20005001 RAL-301_75b 462 chr2L 20036535 20036559 chr2L 20036619 20036643 7 84 4.0 6.0 5.0 1.2 108 chr2L 20036535 intron sNPF + chr2L 20036589 intron sNPF + chr2L 20036643 intron sNPF + chr2L_7_20035001 chr2L_20035001 RAL-301_75b 463 chr2L 20250937 20250951 chr2L 20251014 20251029 8 77 10.0 6.0 8.0 0.9 92 chr2L 20250937 intergenic not near genes chr2L 20250983 intergenic not near genes chr2L 20251029 intergenic not near genes chr2L_8_20250001 chr2L_20250001 RAL-301_75b 464 chr2L 20272119 20272144 chr2L 20282829 20282855 copia 8 10711 6.5 2.5 4.5 1.5 10736 chr2L 20272119 intergenic not near genes chr2L 20277487 intergenic not near genes chr2L 20282855 intergenic not near genes chr2L_8_20275001 chr2L_20275001 RAL-301_75b 465 chr2L 20294301 20294333 chr2L 20294389 20294421 7 89 8.5 7.5 8.0 0.8 120 chr2L 20294301 intergenic CG12617 + chr2L 20294361 intergenic CG12617 + chr2L 20294421 intergenic CG12617 + chr2L_7_20290001 chr2L_20290001 RAL-301_75b 466 chr2L 20303159 20303192 chr2L 20310627 20310660 blood 12 7468 0.0 4.0 2.0 4.0 7501 chr2L 20303159 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310660 intergenic not near genes chr2L_12_20305001 chr2L_20305001 RAL-301_75b 467 chr2L 20320041 20320048 chr2L 20320145 20320151 7 104 7.5 0.0 3.8 1.5 110 chr2L 20320041 intron spir + chr2L 20320096 intron spir + chr2L 20320151 intron spir + chr2L_7_20320001 chr2L_20320001 RAL-301_75b 468 chr2L 20370874 20370892 chr2L 20371074 20371092 6 200 3.5 7.0 5.2 1.0 218 chr2L 20370874 intergenic not near genes chr2L 20370983 intergenic not near genes chr2L 20371092 intergenic not near genes chr2L_6_20370001 chr2L_20370001 RAL-301_75b 469 chr2L 20372220 20372257 chr2L 20372470 20372498 pogo 4 245 0.0 4.5 2.2 1.2 278 chr2L 20372220 intergenic Ugt37a1 - chr2L 20372359 intergenic Ugt37a1 - chr2L 20372498 exon Ugt37a1 - chr2L_4_20370001 chr2L_20370001 RAL-301_75b 470 chr2L 20372850 20372869 chr2L 20372929 20372948 4 79 8.5 7.5 8.0 0.4 98 chr2L 20372850 exon Ugt37a1 - chr2L 20372899 exon Ugt37a1 - chr2L 20372948 exon Ugt37a1 - chr2L_4_20370001 chr2L_20370001 RAL-301_75b 471 chr2L 20498691 20498705 chr2L 20498790 20498804 7 99 1.5 12.0 6.8 0.9 113 chr2L 20498691 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498804 intergenic not near genes chr2L_7_20495001 chr2L_20495001 RAL-301_75b 472 chr2L 20568665 20568683 chr2L 20569055 20569073 X-element 10 389 3.5 2.0 2.8 2.6 408 chr2L 20568665 intron CR45347 + chr2L 20568869 intron CR45347 + chr2L 20569073 intron CR45347 + chr2L_10_20565001 chr2L_20565001 RAL-301_75b 473 chr2L 20576217 20576252 chr2L 20583685 20583720 blood 16 7467 5.0 2.5 3.8 3.3 7503 chr2L 20576217 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583720 3` UTR CR44909 - chr2L_16_20575001 chr2L_20575001 RAL-301_75b 474 chr2L 20588542 20588559 chr2L 20588629 20588646 6 86 5.0 2.5 3.8 1.2 104 chr2L 20588542 intron CR44909 - chr2L 20588594 intron CR44909 - chr2L 20588646 intron CR44909 - chr2L_6_20585001 chr2L_20585001 RAL-301_75b 475 chr2L 20600668 20600688 chr2L 20600867 20600887 7 198 5.0 9.0 7.0 0.9 219 chr2L 20600668 intron CR44909 - chr2L 20600778 intron CR44909 - chr2L 20600887 intron CR44909 - chr2L_7_20600001 chr2L_20600001 RAL-301_75b 476 chr2L 20602718 20602738 chr2L 20602806 20602826 4 88 5.5 5.0 5.2 0.6 108 chr2L 20602718 intron CR44909 - chr2L 20602772 intron CR44909 - chr2L 20602826 intron CR44909 - chr2L_4_20600001 chr2L_20600001 RAL-301_75b 477 chr2L 20639526 20639527 chr2L 20639802 20639802 INE-1 4 276 4.0 15.0 9.5 0.4 276 chr2L 20639526 intergenic not near genes chr2L 20639664 intergenic CG31680 + chr2L 20639802 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-301_75b 478 chr2L 20648111 20648184 chr2L 20648230 20648362 7 161 38.0 51.0 44.5 0.2 251 chr2L 20648111 intron,5` UTR,5` UTR Uhg3 +,snoRNA:Me28S-C2645b +,snoRNA:Me28S-C2645c + chr2L 20648236 5` UTR Uhg3 + chr2L 20648362 5` UTR Uhg3 + chr2L_7_20645001 chr2L_20645001 RAL-301_75b 479 chr2L 20668707 20668723 chr2L 20668783 20668797 7 75 6.0 13.0 9.5 0.7 90 chr2L 20668707 intron CG31678 - chr2L 20668752 intron CG31678 - chr2L 20668797 intron CG31678 - chr2L_7_20665001 chr2L_20665001 RAL-301_75b 480 chr2L 20695795 20695823 chr2L 20695883 20695911 5 88 4.0 3.0 3.5 1.1 116 chr2L 20695795 intron Hr38 - chr2L 20695853 intron Hr38 - chr2L 20695911 intron Hr38 - chr2L_5_20695001 chr2L_20695001 RAL-301_75b 481 chr2L 20826522 20826546 chr2L 20826602 20826626 4 80 5.0 9.0 7.0 0.5 104 chr2L 20826522 intron CG9331 + chr2L 20826574 intron CG9331 + chr2L 20826626 intron CG9331 + chr2L_4_20825001 chr2L_20825001 RAL-301_75b 482 chr2L 20835806 20835838 chr2L 20836523 20836555 Quasimodo 8 717 0.5 2.5 1.5 3.2 749 chr2L 20835806 5` UTR Oseg5 - chr2L 20836180 intergenic Oseg5 -,Spn38F - chr2L 20836555 intergenic Spn38F - chr2L_8_20835001 chr2L_20835001 RAL-301_75b 483 chr2L 20840030 20840057 chr2L 20840241 20840269 5 212 6.0 7.0 6.5 0.7 239 chr2L 20840030 intergenic not near genes chr2L 20840150 intergenic not near genes chr2L 20840269 intergenic CG31676 + chr2L_5_20840001 chr2L_20840001 RAL-301_75b 484 chr2L 20846766 20846794 chr2L 20846850 20846878 9 83 1.0 2.0 1.5 3.6 112 chr2L 20846766 intron CG31676 + chr2L 20846822 intron CG31676 + chr2L 20846878 intron CG31676 + chr2L_9_20845001 chr2L_20845001 RAL-301_75b 485 chr2L 20901470 20901488 chr2L 20902634 20902652 1360 7 1164 0.5 5.0 2.8 1.8 1182 chr2L 20901470 intron,intron CG43739 -,sky - chr2L 20902061 intron,intron CG43739 -,sky - chr2L 20902652 intron,intron CG43739 -,sky - chr2L_7_20900001 chr2L_20900001 RAL-301_75b 486 chr2L 20911027 20911060 chr2L 20911103 20911135 10 76 5.0 5.5 5.2 1.6 108 chr2L 20911027 intron,intron CG43739 -,sky - chr2L 20911081 intron,intron CG43739 -,sky - chr2L 20911135 intron,intron CG43739 -,sky - chr2L_10_20910001 chr2L_20910001 RAL-301_75b 487 chr2L 20946949 20946962 chr2L 20947036 20947049 7 87 3.0 5.0 4.0 1.4 100 chr2L 20946949 intergenic CR44606 - chr2L 20946999 intergenic CR44606 - chr2L 20947049 intergenic CR44606 - chr2L_7_20945001 chr2L_20945001 RAL-301_75b 488 chr2L 20976642 20976675 chr2L 20981457 20981490 X-element 15 4815 1.5 5.0 3.2 3.6 4848 chr2L 20976642 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981490 intron CG42238 - chr2L_15_20975001 chr2L_20975001 RAL-301_75b 489 chr2L 20991045 20991061 chr2L 20991123 20991139 4 78 0.5 4.5 2.5 1.1 94 chr2L 20991045 intron CG42238 - chr2L 20991092 intron CG42238 - chr2L 20991139 intron CG42238 - chr2L_4_20990001 chr2L_20990001 RAL-301_75b 490 chr2L 21020280 21020309 chr2L 21023957 21023985 NOF 7 3677 2.5 0.5 1.5 2.8 3705 chr2L 21020280 intron CG42238 - chr2L 21022132 intron CG42238 - chr2L 21023985 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-301_75b 491 chr2L 21041133 21041166 chr2L 21049394 21049427 Tirant 12 8260 4.5 1.0 2.8 3.2 8294 chr2L 21041133 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049427 intron CG42238 - chr2L_12_21045001 chr2L_21045001 RAL-301_75b 492 chr2L 21074919 21074951 chr2L 21075010 21075042 4 91 3.5 2.0 2.8 1.1 123 chr2L 21074919 intergenic tadr + chr2L 21074980 intergenic tadr + chr2L 21075042 intergenic tadr + chr2L_4_21070001 chr2L_21070001 RAL-301_75b 493 chr2L 21086429 21086456 chr2L 21086543 21086571 14 114 0.0 6.0 3.0 3.5 142 chr2L 21086429 5` UTR CG33509 - chr2L 21086500 5` UTR CG33509 - chr2L 21086571 intergenic CG33509 -,ppk13 - chr2L_14_21085001 chr2L_21085001 RAL-301_75b 494 chr2L 21088917 21088950 chr2L 21089000 21089033 12 83 1.5 1.0 1.2 5.5 116 chr2L 21088917 intergenic ppk13 -,CG9259 + chr2L 21088975 intergenic ppk13 -,CG9259 + chr2L 21089033 intergenic ppk13 -,CG9259 + chr2L_12_21085001 chr2L_21085001 RAL-301_75b 495 chr2L 21158876 21158915 chr2L 21158953 21158991 11 77 3.0 2.0 2.5 3.1 115 chr2L 21158876 intergenic CG9248 +,CG9249 - chr2L 21158934 5` UTR CG9248 + chr2L 21158991 5` UTR CG9248 + chr2L_11_21155001 chr2L_21155001 RAL-301_75b 496 chr2L 21245274 21245305 chr2L 21245515 21245541 8 240 0.0 1.5 0.8 4.4 267 chr2L 21245274 intron Hr39 + chr2L 21245408 intron Hr39 + chr2L 21245541 intron Hr39 + chr2L_8_21245001 chr2L_21245001 RAL-301_75b 497 chr2L 21286623 21286631 chr2L 21286701 21286709 4 78 3.0 8.0 5.5 0.6 86 chr2L 21286623 intron Mio - chr2L 21286666 intron Mio - chr2L 21286709 intron Mio - chr2L_4_21285001 chr2L_21285001 RAL-301_75b 498 chr2L 21347560 21347580 chr2L 21355032 21355052 blood 8 7472 3.5 1.0 2.2 2.5 7492 chr2L 21347560 intron Tsp39D + chr2L 21351306 intron Tsp39D + chr2L 21355052 intron Tsp39D + chr2L_8_21350001 chr2L_21350001 RAL-301_75b 499 chr2L 21355609 21355637 chr2L 21355753 21355782 10 145 2.0 1.0 1.5 4.0 173 chr2L 21355609 intron Tsp39D + chr2L 21355696 intron Tsp39D + chr2L 21355782 intron Tsp39D + chr2L_10_21355001 chr2L_21355001 RAL-301_75b 500 chr2L 21392211 21392238 chr2L 21392296 21392324 6 86 1.0 0.0 0.5 4.0 113 chr2L 21392211 3` UTR nrv3 + chr2L 21392268 3` UTR nrv3 + chr2L 21392324 3` UTR nrv3 + chr2L_6_21390001 chr2L_21390001 RAL-301_75b 501 chr2L 21597027 21597045 chr2L 21604771 21604789 roo 6 7743 6.0 2.5 4.2 1.2 7762 chr2L 21597027 intergenic not near genes chr2L 21600908 intergenic not near genes chr2L 21604789 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-301_75b 502 chr2L 21754670 21754684 chr2L 21754751 21754764 10 80 5.5 5.0 5.2 1.6 94 chr2L 21754670 intron step - chr2L 21754717 intron step - chr2L 21754764 intron step - chr2L_10_21750001 chr2L_21750001 RAL-301_75b 503 chr2L 21771983 21772008 chr2L 21772062 21772087 9 78 3.0 2.5 2.8 2.4 104 chr2L 21771983 intron CG31612 - chr2L 21772035 intron CG31612 - chr2L 21772087 intron CG31612 - chr2L_9_21770001 chr2L_21770001 RAL-301_75b 504 chr2L 21819328 21819357 chr2L 21819416 21819445 12 88 2.5 3.0 2.8 3.2 117 chr2L 21819328 intergenic CR44786 + chr2L 21819386 intergenic CR44786 + chr2L 21819445 intergenic CR44786 + chr2L_12_21815001 chr2L_21815001 RAL-301_75b 505 chr2L 21953800 21953819 chr2L 21954701 21954720 14 901 27.5 19.5 23.5 0.6 920 chr2L 21953800 intergenic not near genes chr2L 21954260 intergenic not near genes chr2L 21954720 intergenic not near genes chr2L_14_21950001 chr2L_21950001 RAL-301_75b 506 chr2L 21981684 21981712 chr2L 21990849 21990877 roo 10 9165 3.0 3.0 3.0 2.5 9193 chr2L 21981684 exon CG2528 - chr2L 21986280 intron CG2528 - chr2L 21990877 exon CG2528 - chr2L_10_21985001 chr2L_21985001 RAL-301_75b 507 chr2L 21996942 21996970 chr2L 21997023 21997051 6 81 3.0 1.0 2.0 2.0 109 chr2L 21996942 intergenic not near genes chr2L 21996996 intergenic not near genes chr2L 21997051 intergenic not near genes chr2L_6_21995001 chr2L_21995001 RAL-301_75b 508 chr2L 22001651 22001675 chr2L 22001727 22001751 5 76 1.0 7.5 4.2 1.0 100 chr2L 22001651 intergenic not near genes chr2L 22001701 intergenic not near genes chr2L 22001751 intergenic not near genes chr2L_5_22000001 chr2L_22000001 RAL-301_75b 509 chr2L 22025825 22025852 chr2L 22025905 22025930 8 79 3.0 3.5 3.2 1.9 105 chr2L 22025825 intergenic tio + chr2L 22025878 intergenic tio + chr2L 22025930 intergenic tio + chr2L_8_22025001 chr2L_22025001 RAL-301_75b 510 chr2L 22212139 22212157 chr2L 22212686 22212704 8 547 3.5 3.0 3.2 1.9 565 chr2L 22212139 intron Ir40a - chr2L 22212422 intron Ir40a - chr2L 22212704 intron Ir40a - chr2L_8_22210001 chr2L_22210001 RAL-301_75b 511 chr2L 22215907 22215940 chr2L 22215992 22216026 15 86 1.5 2.0 1.8 5.4 119 chr2L 22215907 intergenic not near genes chr2L 22215966 intergenic not near genes chr2L 22216026 intergenic not near genes chr2L_15_22215001 chr2L_22215001 RAL-301_75b 512 chr2L 22239430 22239457 chr2L 22239510 22239537 8 81 1.0 6.5 3.8 1.7 107 chr2L 22239430 3` UTR CR43765 - chr2L 22239484 3` UTR CR43765 - chr2L 22239537 3` UTR CR43765 - chr2L_8_22235001 chr2L_22235001 RAL-301_75b 513 chr2L 22258624 22258646 chr2L 22260748 22260770 G6 12 2124 2.5 7.5 5.0 2.0 2146 chr2L 22258624 intergenic Tif-IA + chr2L 22259697 intergenic not near genes chr2L 22260770 intergenic not near genes chr2L_12_22255001 chr2L_22255001 RAL-301_75b 514 chr2L 22305772 22305782 chr2L 22305850 22305860 5 78 1.5 5.0 3.2 1.2 88 chr2L 22305772 intergenic not near genes chr2L 22305816 intergenic not near genes chr2L 22305860 intergenic not near genes chr2L_5_22305001 chr2L_22305001 RAL-301_75b 515 chr2L 22490515 22490525 chr2L 22497650 22497660 springer 4 7135 9.5 12.5 11.0 0.3 7145 chr2L 22490515 intergenic not near genes chr2L 22494088 intergenic not near genes chr2L 22497660 intergenic not near genes chr2L_4_22490001 chr2L_22490001 RAL-301_75b 516 chr2L 22581969 22581995 chr2L 22583758 22583784 S-element 14 1789 5.0 2.0 3.5 3.1 1815 chr2L 22581969 intron CG17494 + chr2L 22582876 intron CG17494 + chr2L 22583784 intron CG17494 + chr2L_14_22580001 chr2L_22580001 RAL-301_75b 517 chr2L 22776439 22776452 chr2L 22778228 22778241 S-element 4 1789 5.0 9.5 7.2 0.5 1802 chr2L 22776439 intergenic not near genes chr2L 22777340 intergenic not near genes chr2L 22778241 intergenic not near genes chr2L_4_22775001 chr2L_22775001 RAL-301_75b 518 chr2L 23181406 23181407 chr2L 23181515 23181516 4 109 11.5 9.5 10.5 0.3 110 chr2L 23181406 intergenic not near genes chr2L 23181461 intergenic not near genes chr2L 23181516 intergenic not near genes chr2L_4_23180001 chr2L_23180001 RAL-301_75b 519 chr2R 469957 469979 chr2R 473198 473220 F-element 8 3240 3.0 2.5 2.8 2.1 3263 chr2R 469957 intergenic not near genes chr2R 471588 intergenic not near genes chr2R 473220 intergenic not near genes chr2R_8_470001 chr2R_470001 RAL-301_75b 520 chr2R 529326 529337 chr2R 537950 537962 Max-element 4 8625 1.5 2.5 2.0 1.3 8636 chr2R 529326 intron CG40378 + chr2R 533644 intron CG40378 + chr2R 537962 intron CG40378 + chr2R_4_530001 chr2R_530001 RAL-301_75b 521 chr2R 1082366 1082383 chr2R 1087142 1087159 Doc 6 4775 3.0 6.5 4.8 1.0 4793 chr2R 1082366 intron rl + chr2R 1084762 intron rl + chr2R 1087159 intron rl + chr2R_6_1080001 chr2R_1080001 RAL-301_75b 522 chr2R 1340064 1340077 chr2R 1340154 1340167 5 90 16.5 16.5 16.5 0.3 103 chr2R 1340064 intergenic not near genes chr2R 1340116 intergenic not near genes chr2R 1340167 intergenic not near genes chr2R_5_1340001 chr2R_1340001 RAL-301_75b 523 chr2R 1513951 1513978 chr2R 1514104 1514131 7 153 34.5 34.0 34.2 0.2 180 chr2R 1513951 3` UTR Maf1 - chr2R 1514041 3` UTR Maf1 - chr2R 1514131 3` UTR Maf1 - chr2R_7_1510001 chr2R_1510001 RAL-301_75b 524 chr2R 2015135 2015138 chr2R 2015210 2015215 4 76 8.5 11.0 9.8 0.4 80 chr2R 2015135 intron CG17684 - chr2R 2015175 intron CG17684 - chr2R 2015215 intron CG17684 - chr2R_4_2015001 chr2R_2015001 RAL-301_75b 525 chr2R 2498984 2499014 chr2R 2508131 2508161 roo 15 9147 3.0 2.5 2.8 3.9 9177 chr2R 2498984 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508161 intron MFS17 - chr2R_15_2500001 chr2R_2500001 RAL-301_75b 526 chr2R 3291928 3292102 chr2R 3915097 3915263 4 623163 8.0 19.0 13.5 0.3 623335 chr2R 3291928 intergenic not near genes chr2R 3603596 intergenic not near genes chr2R 3915263 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-301_75b 527 chr2R 4186917 4186948 chr2R 4187265 4187296 9 348 2.5 3.0 2.8 2.4 379 chr2R 4186917 3` UTR CG40127 - chr2R 4187106 3` UTR CG40127 - chr2R 4187296 3` UTR CG40127 - chr2R_9_4185001 chr2R_4185001 RAL-301_75b 528 chr2R 4604554 4604572 chr2R 4604633 4604651 8 79 11.5 9.0 10.2 0.7 97 chr2R 4604554 intron p120ctn + chr2R 4604602 intron p120ctn + chr2R 4604651 intron p120ctn + chr2R_8_4600001 chr2R_4600001 RAL-301_75b 529 chr2R 4622951 4622988 chr2R 4624110 4624147 1360 9 1158 4.5 4.5 4.5 1.6 1196 chr2R 4622951 intergenic CR44101 - chr2R 4623549 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_9_4620001 chr2R_4620001 RAL-301_75b 530 chr2R 4624647 4624669 chr2R 4626552 4626574 Bica 5 1905 3.5 6.5 5.0 0.8 1927 chr2R 4624647 intergenic not near genes chr2R 4625610 intergenic not near genes chr2R 4626574 intergenic not near genes chr2R_5_4625001 chr2R_4625001 RAL-301_75b 531 chr2R 4634161 4634182 chr2R 4634239 4634261 13 78 7.5 6.5 7.0 1.6 100 chr2R 4634161 intergenic not near genes chr2R 4634211 intergenic not near genes chr2R 4634261 intergenic not near genes chr2R_13_4630001 chr2R_4630001 RAL-301_75b 532 chr2R 4750344 4750371 chr2R 4751501 4751526 1360 6 1156 8.0 3.5 5.8 0.9 1182 chr2R 4750344 intron conu + chr2R 4750935 intron conu + chr2R 4751526 intron conu + chr2R_6_4750001 chr2R_4750001 RAL-301_75b 533 chr2R 4783433 4783445 chr2R 4783509 4783520 5 77 14.0 11.5 12.8 0.4 87 chr2R 4783433 intergenic not near genes chr2R 4783476 intergenic not near genes chr2R 4783520 intergenic not near genes chr2R_5_4780001 chr2R_4780001 RAL-301_75b 534 chr2R 4821219 4821245 chr2R 4821305 4821331 8 86 1.0 4.5 2.8 2.1 112 chr2R 4821219 intron CG17528 - chr2R 4821275 intron CG17528 - chr2R 4821331 intron CG17528 - chr2R_8_4820001 chr2R_4820001 RAL-301_75b 535 chr2R 4838882 4838888 chr2R 4840405 4840411 transib2 6 1523 17.0 13.5 15.2 0.4 1529 chr2R 4838882 intergenic not near genes chr2R 4839646 intergenic not near genes chr2R 4840411 intergenic not near genes chr2R_6_4835001 chr2R_4835001 RAL-301_75b 536 chr2R 5009008 5009013 chr2R 5009317 5009321 4 308 13.0 4.5 8.8 0.4 313 chr2R 5009008 intron Ir41a + chr2R 5009164 intron Ir41a + chr2R 5009321 intron Ir41a + chr2R_4_5005001 chr2R_5005001 RAL-301_75b 537 chr2R 5019290 5019311 chr2R 5019376 5019397 6 86 3.0 4.5 3.8 1.2 107 chr2R 5019290 intron Ir41a + chr2R 5019344 intron Ir41a + chr2R 5019397 intron Ir41a + chr2R_6_5015001 chr2R_5015001 RAL-301_75b 538 chr2R 5038526 5038537 chr2R 5039322 5039334 10 797 7.0 3.5 5.2 1.6 808 chr2R 5038526 intergenic not near genes chr2R 5038930 intergenic not near genes chr2R 5039334 intergenic not near genes chr2R_10_5035001 chr2R_5035001 RAL-301_75b 539 chr2R 5040751 5040761 chr2R 5041241 5041251 4 490 0.0 2.5 1.2 1.8 500 chr2R 5040751 intergenic not near genes chr2R 5041001 intergenic not near genes chr2R 5041251 intergenic not near genes chr2R_4_5040001 chr2R_5040001 RAL-301_75b 540 chr2R 5075351 5075352 chr2R 5075767 5075768 5 416 8.0 9.0 8.5 0.5 417 chr2R 5075351 intergenic not near genes chr2R 5075560 intergenic not near genes chr2R 5075768 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-301_75b 541 chr2R 5080800 5080803 chr2R 5080890 5080892 5 90 4.0 4.0 4.0 1.0 92 chr2R 5080800 intergenic not near genes chr2R 5080846 intergenic not near genes chr2R 5080892 intergenic not near genes chr2R_5_5080001 chr2R_5080001 RAL-301_75b 542 chr2R 5188710 5188734 chr2R 5189403 5189422 gypsy8 9 692 6.5 7.5 7.0 1.1 712 chr2R 5188710 intron Nipped-A - chr2R 5189066 intron Nipped-A - chr2R 5189422 intron Nipped-A - chr2R_9_5185001 chr2R_5185001 RAL-301_75b 543 chr2R 5209787 5209790 chr2R 5210320 5210323 4 533 3.5 3.0 3.2 1.0 536 chr2R 5209787 intron Nipped-A - chr2R 5210055 intron Nipped-A - chr2R 5210323 intron Nipped-A - chr2R_4_5210001 chr2R_5210001 RAL-301_75b 544 chr2R 5209791 5209807 chr2R 5210319 5210340 7 531 3.0 3.0 3.0 1.8 549 chr2R 5209791 intron Nipped-A - chr2R 5210066 intron Nipped-A - chr2R 5210340 intron Nipped-A - chr2R_7_5210001 chr2R_5210001 RAL-301_75b 545 chr2R 5267605 5267626 chr2R 5267692 5267713 4 87 17.0 16.5 16.8 0.2 108 chr2R 5267605 intron d4 + chr2R 5267659 intron d4 + chr2R 5267713 intron d4 + chr2R_4_5265001 chr2R_5265001 RAL-301_75b 546 chr2R 5341367 5341373 chr2R 5341568 5341573 4 202 4.5 3.0 3.8 0.8 206 chr2R 5341367 intergenic CG10465 - chr2R 5341470 intergenic CG10465 - chr2R 5341573 intergenic not near genes chr2R_4_5340001 chr2R_5340001 RAL-301_75b 547 chr2R 5363487 5363507 chr2R 5363565 5363585 7 78 3.0 5.5 4.2 1.3 98 chr2R 5363487 5` UTR CR42646 + chr2R 5363536 intron CR42646 + chr2R 5363585 intron CR42646 + chr2R_7_5360001 chr2R_5360001 RAL-301_75b 548 chr2R 5396256 5396281 chr2R 5396494 5396519 6 238 13.0 18.5 15.8 0.4 263 chr2R 5396256 intergenic not near genes chr2R 5396388 intergenic not near genes chr2R 5396519 intergenic not near genes chr2R_6_5395001 chr2R_5395001 RAL-301_75b 549 chr2R 5417998 5418024 chr2R 5420630 5420656 Burdock 16 2632 5.5 7.0 6.2 2.2 2658 chr2R 5417998 intron laccase2 + chr2R 5419327 intron laccase2 + chr2R 5420656 intron laccase2 + chr2R_16_5415001 chr2R_5415001 RAL-301_75b 550 chr2R 5460535 5460552 chr2R 5460636 5460656 6 102 5.5 11.0 8.2 0.7 121 chr2R 5460535 intergenic not near genes chr2R 5460596 intergenic not near genes chr2R 5460656 intergenic not near genes chr2R_6_5460001 chr2R_5460001 RAL-301_75b 551 chr2R 5491669 5491677 chr2R 5491761 5491770 4 93 5.0 5.5 5.2 0.6 101 chr2R 5491669 intron CG30440 - chr2R 5491720 intron CG30440 - chr2R 5491770 intron CG30440 - chr2R_4_5490001 chr2R_5490001 RAL-301_75b 552 chr2R 5543201 5543220 chr2R 5547283 5547304 invader1 13 4083 0.0 6.0 3.0 3.2 4103 chr2R 5543201 intron CG30438 + chr2R 5545252 intron CG30438 + chr2R 5547304 intron CG30438 + chr2R_13_5545001 chr2R_5545001 RAL-301_75b 553 chr2R 5581400 5581406 chr2R 5627609 5627615 4 46209 8.5 11.5 10.0 0.4 46215 chr2R 5581400 intergenic not near genes chr2R 5604508 exon Fis1 - chr2R 5627615 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-301_75b 554 chr2R 5710655 5710679 chr2R 5710732 5710755 11 76 2.5 6.5 4.5 2.0 100 chr2R 5710655 intron ap - chr2R 5710705 intron ap - chr2R 5710755 intron ap - chr2R_11_5710001 chr2R_5710001 RAL-301_75b 555 chr2R 5790463 5790496 chr2R 5790547 5790580 6 84 2.0 1.5 1.8 2.1 117 chr2R 5790463 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790580 intergenic not near genes chr2R_6_5790001 chr2R_5790001 RAL-301_75b 556 chr2R 5859979 5860012 chr2R 5860091 5860122 13 112 1.5 7.5 4.5 2.4 143 chr2R 5859979 3` UTR dpr12 + chr2R 5860050 3` UTR dpr12 + chr2R 5860122 3` UTR dpr12 + chr2R_13_5860001 chr2R_5860001 RAL-301_75b 557 chr2R 5869294 5869305 chr2R 5874370 5874381 flea 7 5076 4.0 6.0 5.0 1.2 5087 chr2R 5869294 intergenic not near genes chr2R 5871838 intergenic not near genes chr2R 5874381 intergenic not near genes chr2R_7_5870001 chr2R_5870001 RAL-301_75b 558 chr2R 5878923 5878934 chr2R 5879003 5879013 5 80 3.5 2.0 2.8 1.3 90 chr2R 5878923 intergenic CG44438 - chr2R 5878968 intergenic CG44438 - chr2R 5879013 intergenic CG44438 - chr2R_5_5875001 chr2R_5875001 RAL-301_75b 559 chr2R 5902175 5902181 chr2R 5909734 5909740 17.6 4 7559 2.0 2.5 2.2 1.2 7565 chr2R 5902175 intron CG43366 + chr2R 5905958 intron CG43366 + chr2R 5909740 intron CG43366 + chr2R_4_5905001 chr2R_5905001 RAL-301_75b 560 chr2R 5951179 5951190 chr2R 5951264 5951273 4 84 4.5 4.5 4.5 0.7 94 chr2R 5951179 intergenic not near genes chr2R 5951226 intergenic not near genes chr2R 5951273 intergenic not near genes chr2R_4_5950001 chr2R_5950001 RAL-301_75b 561 chr2R 6075084 6075102 chr2R 6075161 6075179 5 76 8.5 9.5 9.0 0.5 95 chr2R 6075084 exon CG7845 - chr2R 6075132 exon CG7845 - chr2R 6075179 exon CG7845 - chr2R_5_6075001 chr2R_6075001 RAL-301_75b 562 chr2R 6081430 6081430 chr2R 6081551 6081551 4 121 11.0 22.5 16.8 0.2 121 chr2R 6081430 intron Ars2 - chr2R 6081490 intron Ars2 - chr2R 6081551 intron Ars2 - chr2R_4_6080001 chr2R_6080001 RAL-301_75b 563 chr2R 6096718 6096748 chr2R 6101914 6101946 BS 6 5197 2.0 2.5 2.2 1.9 5228 chr2R 6096718 intron EcR - chr2R 6099332 intron EcR - chr2R 6101946 intron EcR - chr2R_6_6095001 chr2R_6095001 RAL-301_75b 564 chr2R 6120573 6120573 chr2R 18377598 18377599 4 12257026 9.0 3.5 6.2 0.6 12257026 chr2R 6120573 intron EcR - chr2R 12249086 intergenic not near genes chr2R 18377599 5` UTR CR42736 + chr2R_4_12245001 chr2R_12245001 RAL-301_75b 565 chr2R 6129329 6129354 chr2R 6129406 6129432 13 77 6.0 5.0 5.5 2.0 103 chr2R 6129329 intron EcR - chr2R 6129380 intron EcR - chr2R 6129432 intron EcR - chr2R_13_6125001 chr2R_6125001 RAL-301_75b 566 chr2R 6178680 6178707 chr2R 6178766 6178791 4 86 6.5 6.0 6.2 0.6 111 chr2R 6178680 intergenic not near genes chr2R 6178736 intergenic not near genes chr2R 6178791 intergenic not near genes chr2R_4_6175001 chr2R_6175001 RAL-301_75b 567 chr2R 6236219 6236241 chr2R 6236307 6236329 6 88 9.0 3.0 6.0 0.9 110 chr2R 6236219 intron bin3 + chr2R 6236274 intron bin3 + chr2R 6236329 intron bin3 + chr2R_6_6235001 chr2R_6235001 RAL-301_75b 568 chr2R 6247814 6247836 chr2R 6247892 6247914 15 78 3.0 3.5 3.2 3.6 100 chr2R 6247814 intron Pld + chr2R 6247864 intron Pld + chr2R 6247914 intron Pld + chr2R_15_6245001 chr2R_6245001 RAL-301_75b 569 chr2R 6494534 6494552 chr2R 6499296 6499314 F-element 8 4762 2.5 1.5 2.0 2.7 4780 chr2R 6494534 intergenic not near genes chr2R 6496924 intergenic not near genes chr2R 6499314 intergenic not near genes chr2R_8_6495001 chr2R_6495001 RAL-301_75b 570 chr2R 6500959 6500986 chr2R 6501054 6501081 5 94 11.5 8.0 9.8 0.5 122 chr2R 6500959 intergenic not near genes chr2R 6501020 intergenic not near genes chr2R 6501081 intergenic not near genes chr2R_5_6500001 chr2R_6500001 RAL-301_75b 571 chr2R 6530772 6530789 chr2R 6530852 6530869 4 80 5.0 4.0 4.5 0.7 97 chr2R 6530772 intron jing + chr2R 6530820 intron jing + chr2R 6530869 intron jing + chr2R_4_6530001 chr2R_6530001 RAL-301_75b 572 chr2R 6579777 6579800 chr2R 6584863 6584886 flea 4 5086 4.0 0.0 2.0 1.3 5109 chr2R 6579777 intron jing + chr2R 6582332 intron jing + chr2R 6584886 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-301_75b 573 chr2R 6633212 6633229 chr2R 6633289 6633306 4 77 5.5 6.5 6.0 0.6 94 chr2R 6633212 intergenic Vha16-1 -,Trap1 - chr2R 6633259 intergenic Vha16-1 -,Trap1 - chr2R 6633306 intergenic Vha16-1 -,Trap1 - chr2R_4_6630001 chr2R_6630001 RAL-301_75b 574 chr2R 6691126 6691158 chr2R 6691205 6691236 9 79 21.5 20.5 21.0 0.4 110 chr2R 6691126 intron CG9422 + chr2R 6691181 intron CG9422 + chr2R 6691236 intron CG9422 + chr2R_9_6690001 chr2R_6690001 RAL-301_75b 575 chr2R 6696610 6696633 chr2R 6696692 6696716 4 82 22.5 14.5 18.5 0.2 106 chr2R 6696610 5` UTR Mob4 - chr2R 6696663 intergenic Mob4 -,Rab2 + chr2R 6696716 intergenic Rab2 +,Mob4 - chr2R_4_6695001 chr2R_6695001 RAL-301_75b 576 chr2R 6711123 6711145 chr2R 6711220 6711242 5 97 5.5 3.0 4.2 1.0 119 chr2R 6711123 intron,intron CG3409 -,CG45092 - chr2R 6711182 intron,intron CG3409 -,CG45092 - chr2R 6711242 intron,intron CG3409 -,CG45092 - chr2R_5_6710001 chr2R_6710001 RAL-301_75b 577 chr2R 6846308 6846326 chr2R 6846385 6846401 6 77 5.0 6.5 5.8 0.9 93 chr2R 6846308 intergenic not near genes chr2R 6846354 intergenic not near genes chr2R 6846401 intergenic not near genes chr2R_6_6845001 chr2R_6845001 RAL-301_75b 578 chr2R 6952164 6952176 chr2R 6959744 6959756 opus 7 7580 2.5 2.5 2.5 2.0 7592 chr2R 6952164 intron,intron mim -,CheB42c - chr2R 6955960 intron,intron mim -,CheB42c - chr2R 6959756 intron,intron mim -,CheB42c - chr2R_7_6955001 chr2R_6955001 RAL-301_75b 579 chr2R 6964284 6964315 chr2R 6964361 6964392 6 77 6.5 6.0 6.2 0.8 108 chr2R 6964284 intron,intron mim -,CheB42c - chr2R 6964338 intron,intron mim -,CheB42c - chr2R 6964392 intron,intron mim -,CheB42c - chr2R_6_6960001 chr2R_6960001 RAL-301_75b 580 chr2R 6978814 6978840 chr2R 6978953 6978981 6 141 4.5 6.5 5.5 0.9 167 chr2R 6978814 intron vimar - chr2R 6978898 intron vimar - chr2R 6978981 intron vimar - chr2R_6_6975001 chr2R_6975001 RAL-301_75b 581 chr2R 7091215 7091235 chr2R 7091297 7091317 9 81 14.5 9.5 12.0 0.7 102 chr2R 7091215 intron esn + chr2R 7091266 intron esn + chr2R 7091317 intron esn + chr2R_9_7090001 chr2R_7090001 RAL-301_75b 582 chr2R 7101620 7101644 chr2R 7101715 7101738 9 95 6.5 7.0 6.8 1.2 118 chr2R 7101620 intron esn + chr2R 7101679 intron esn + chr2R 7101738 intron esn + chr2R_9_7100001 chr2R_7100001 RAL-301_75b 583 chr2R 7139945 7139947 chr2R 7141437 7141439 hopper2 5 1492 9.0 10.5 9.8 0.5 1494 chr2R 7139945 intergenic not near genes chr2R 7140692 intergenic not near genes chr2R 7141439 intergenic not near genes chr2R_5_7140001 chr2R_7140001 RAL-301_75b 584 chr2R 7196563 7196594 chr2R 7201338 7201369 F-element 11 4775 4.5 2.0 3.2 2.6 4806 chr2R 7196563 intron pk + chr2R 7198966 intron pk + chr2R 7201369 intron pk + chr2R_11_7195001 chr2R_7195001 RAL-301_75b 585 chr2R 7208277 7208302 chr2R 7208364 7208388 7 87 4.0 3.0 3.5 1.6 111 chr2R 7208277 intron pk + chr2R 7208332 intron pk + chr2R 7208388 intron pk + chr2R_7_7205001 chr2R_7205001 RAL-301_75b 586 chr2R 7209850 7209869 chr2R 7217598 7217630 roo 9 7749 4.0 2.5 3.2 2.1 7780 chr2R 7209850 intron pk + chr2R 7213740 intron pk + chr2R 7217630 intron pk + chr2R_9_7210001 chr2R_7210001 RAL-301_75b 587 chr2R 7235819 7235837 chr2R 7240910 7240926 jockey 9 5091 6.5 2.0 4.2 1.7 5107 chr2R 7235819 intergenic not near genes chr2R 7238372 intergenic not near genes chr2R 7240926 intergenic not near genes chr2R_9_7235001 chr2R_7235001 RAL-301_75b 588 chr2R 7389576 7389595 chr2R 7389678 7389696 7 102 12.5 10.5 11.5 0.6 120 chr2R 7389576 intron CG11107 + chr2R 7389636 intron CG11107 + chr2R 7389696 intron CG11107 + chr2R_7_7385001 chr2R_7385001 RAL-301_75b 589 chr2R 7417904 7418164 chr2R 7417990 7418243 18 81 5.0 7.5 6.2 2.5 339 chr2R 7417904 intergenic not near genes chr2R 7418074 intergenic not near genes chr2R 7418243 intergenic not near genes chr2R_18_7415001 chr2R_7415001 RAL-301_75b 590 chr2R 7608408 7608429 chr2R 7613611 7613632 I-element 14 5203 8.5 0.0 4.2 2.7 5224 chr2R 7608408 intron CG1358 - chr2R 7611020 intron CG1358 - chr2R 7613632 intron CG1358 - chr2R_14_7610001 chr2R_7610001 RAL-301_75b 591 chr2R 7692017 7692038 chr2R 7692097 7692119 6 81 4.5 7.5 6.0 0.9 102 chr2R 7692017 intron CG1399 - chr2R 7692068 intron CG1399 - chr2R 7692119 intron CG1399 - chr2R_6_7690001 chr2R_7690001 RAL-301_75b 592 chr2R 7714081 7714109 chr2R 7714157 7714185 9 76 5.5 1.5 3.5 2.0 104 chr2R 7714081 exon CG1942 + chr2R 7714133 3` UTR CG1942 + chr2R 7714185 intergenic CG1942 + chr2R_9_7710001 chr2R_7710001 RAL-301_75b 593 chr2R 7869194 7869207 chr2R 7873980 7873993 Doc 7 4785 3.5 7.5 5.5 1.1 4799 chr2R 7869194 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7873993 intron Dgk - chr2R_7_7870001 chr2R_7870001 RAL-301_75b 594 chr2R 7910700 7910716 chr2R 7912354 7912371 6 1655 7.5 6.0 6.8 0.8 1671 chr2R 7910700 intron CG30377 + chr2R 7911536 intron CG30377 + chr2R 7912371 intron CG30377 + chr2R_6_7910001 chr2R_7910001 RAL-301_75b 595 chr2R 7915712 7915735 chr2R 7915803 7915827 4 92 3.0 6.5 4.8 0.7 115 chr2R 7915712 intron CG12159 - chr2R 7915770 intron CG12159 - chr2R 7915827 intron CG12159 - chr2R_4_7915001 chr2R_7915001 RAL-301_75b 596 chr2R 7956088 7956108 chr2R 7956164 7956183 4 76 6.0 10.5 8.2 0.4 95 chr2R 7956088 intergenic CG2906 +,CG14764 - chr2R 7956136 intergenic CG2906 +,CG14764 - chr2R 7956183 5` UTR CG2906 + chr2R_4_7955001 chr2R_7955001 RAL-301_75b 597 chr2R 8018126 8018147 chr2R 8018219 8018240 5 93 2.5 4.5 3.5 1.1 114 chr2R 8018126 intergenic not near genes chr2R 8018183 intergenic not near genes chr2R 8018240 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-301_75b 598 chr2R 8026812 8026835 chr2R 8026888 8026911 4 76 1.0 1.5 1.2 1.8 99 chr2R 8026812 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026911 intergenic CR45267 + chr2R_4_8025001 chr2R_8025001 RAL-301_75b 599 chr2R 8067071 8067098 chr2R 8067155 8067182 16 84 8.5 9.5 9.0 1.6 111 chr2R 8067071 intron CG17977 - chr2R 8067126 exon CG17977 - chr2R 8067182 exon CG17977 - chr2R_16_8065001 chr2R_8065001 RAL-301_75b 600 chr2R 8076683 8076710 chr2R 8076763 8076790 9 79 7.5 9.0 8.2 1.0 107 chr2R 8076683 intron lig + chr2R 8076736 intron lig + chr2R 8076790 intron lig + chr2R_9_8075001 chr2R_8075001 RAL-301_75b 601 chr2R 8089263 8089285 chr2R 8089349 8089365 4 84 2.0 8.5 5.2 0.6 102 chr2R 8089263 3` UTR sut2 + chr2R 8089314 intergenic sut2 +,sut3 + chr2R 8089365 intergenic sut2 +,sut3 + chr2R_4_8085001 chr2R_8085001 RAL-301_75b 602 chr2R 8114030 8114062 chr2R 8114119 8114150 9 88 1.0 5.5 3.2 2.1 120 chr2R 8114030 intergenic Asap - chr2R 8114090 intergenic Asap - chr2R 8114150 intergenic Asap - chr2R_9_8110001 chr2R_8110001 RAL-301_75b 603 chr2R 8249565 8249845 chr2R 8249647 8249939 10 89 7.5 1.5 4.5 1.8 374 chr2R 8249565 5` UTR CG44439 - chr2R 8249752 intergenic CG44439 - chr2R 8249939 intergenic CG44439 - chr2R_10_8245001 chr2R_8245001 RAL-301_75b 604 chr2R 8308686 8308713 chr2R 8308772 8308798 13 86 12.0 15.0 13.5 0.9 112 chr2R 8308686 intergenic not near genes chr2R 8308742 intergenic not near genes chr2R 8308798 intergenic not near genes chr2R_13_8305001 chr2R_8305001 RAL-301_75b 605 chr2R 8330863 8330894 chr2R 8331349 8331380 roo 10 486 3.5 4.0 3.8 2.1 517 chr2R 8330863 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331380 intron pdm3 + chr2R_10_8330001 chr2R_8330001 RAL-301_75b 606 chr2R 8403442 8403449 chr2R 8403525 8403532 5 83 12.0 8.5 10.2 0.4 90 chr2R 8403442 intron CG2121 - chr2R 8403487 intron CG2121 - chr2R 8403532 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-301_75b 607 chr2R 8411134 8411166 chr2R 8413304 8413337 12 2170 13.0 19.0 16.0 0.7 2203 chr2R 8411134 intron CG2121 - chr2R 8412236 intergenic CG2121 - chr2R 8413337 intergenic not near genes chr2R_12_8410001 chr2R_8410001 RAL-301_75b 608 chr2R 8452917 8452929 chr2R 8452998 8453010 4 81 6.0 17.5 11.8 0.3 93 chr2R 8452917 intergenic not near genes chr2R 8452964 intergenic not near genes chr2R 8453010 intergenic not near genes chr2R_4_8450001 chr2R_8450001 RAL-301_75b 609 chr2R 8453085 8453117 chr2R 8453501 8453532 5 416 15.0 12.0 13.5 0.3 447 chr2R 8453085 intergenic not near genes chr2R 8453308 intergenic Mal-A2 + chr2R 8453532 intergenic Mal-A2 + chr2R_5_8450001 chr2R_8450001 RAL-301_75b 610 chr2R 8480942 8480967 chr2R 8481066 8481091 9 124 6.5 8.5 7.5 1.1 149 chr2R 8480942 intron mtt - chr2R 8481016 intron mtt - chr2R 8481091 intron mtt - chr2R_9_8480001 chr2R_8480001 RAL-301_75b 611 chr2R 8483965 8483978 chr2R 8484040 8484054 4 76 6.5 1.0 3.8 0.8 89 chr2R 8483965 intron mtt - chr2R 8484010 intron mtt - chr2R 8484054 intron mtt - chr2R_4_8480001 chr2R_8480001 RAL-301_75b 612 chr2R 8511616 8511619 chr2R 8511695 8511699 4 80 13.5 13.0 13.2 0.3 83 chr2R 8511616 intron mtt - chr2R 8511658 intron mtt - chr2R 8511699 intron mtt - chr2R_4_8510001 chr2R_8510001 RAL-301_75b 613 chr2R 8524078 8524091 chr2R 8524160 8524173 8 82 7.0 6.0 6.5 1.1 95 chr2R 8524078 intron mtt - chr2R 8524126 intron mtt - chr2R 8524173 intron mtt - chr2R_8_8520001 chr2R_8520001 RAL-301_75b 614 chr2R 8612586 8612610 chr2R 8612663 8612687 11 77 4.0 6.5 5.2 1.8 101 chr2R 8612586 intron CG8642 - chr2R 8612636 intron CG8642 - chr2R 8612687 intron CG8642 - chr2R_11_8610001 chr2R_8610001 RAL-301_75b 615 chr2R 8633104 8633108 chr2R 8633443 8633447 4 339 9.0 13.0 11.0 0.3 343 chr2R 8633104 intergenic not near genes chr2R 8633276 intergenic not near genes chr2R 8633447 intergenic not near genes chr2R_4_8630001 chr2R_8630001 RAL-301_75b 616 chr2R 8654184 8654202 chr2R 8654266 8654284 7 82 8.0 6.5 7.2 0.9 100 chr2R 8654184 intron ptc + chr2R 8654234 intron ptc + chr2R 8654284 intron ptc + chr2R_7_8650001 chr2R_8650001 RAL-301_75b 617 chr2R 8658232 8658256 chr2R 8658308 8658332 4 76 2.0 3.0 2.5 1.1 100 chr2R 8658232 intron ptc + chr2R 8658282 intron ptc + chr2R 8658332 intron ptc + chr2R_4_8655001 chr2R_8655001 RAL-301_75b 618 chr2R 8668433 8668453 chr2R 8668521 8668541 6 88 6.0 4.5 5.2 1.0 108 chr2R 8668433 intron Acsl + chr2R 8668487 intron Acsl + chr2R 8668541 intron Acsl + chr2R_6_8665001 chr2R_8665001 RAL-301_75b 619 chr2R 8722767 8722783 chr2R 8723006 8723024 pogo 8 241 8.5 5.0 6.8 1.0 257 chr2R 8722767 intron CG14767 - chr2R 8722896 intron CG14767 - chr2R 8723024 intron CG14767 - chr2R_8_8720001 chr2R_8720001 RAL-301_75b 620 chr2R 8744674 8744695 chr2R 8744765 8744786 9 91 1.0 5.0 3.0 2.2 112 chr2R 8744674 intron CG8740 + chr2R 8744730 intron CG8740 + chr2R 8744786 intron CG8740 + chr2R_9_8740001 chr2R_8740001 RAL-301_75b 621 chr2R 8759767 8759780 chr2R 8759846 8759859 4 79 5.5 5.5 5.5 0.6 92 chr2R 8759767 intergenic CG8740 + chr2R 8759813 intergenic CG8740 + chr2R 8759859 intergenic CG8740 + chr2R_4_8755001 chr2R_8755001 RAL-301_75b 622 chr2R 8810205 8810231 chr2R 8810294 8810320 7 89 5.0 8.5 6.8 0.9 115 chr2R 8810205 intron sns + chr2R 8810262 intron sns + chr2R 8810320 intron sns + chr2R_7_8810001 chr2R_8810001 RAL-301_75b 623 chr2R 8833433 8833448 chr2R 8833515 8833527 5 81 18.5 13.0 15.8 0.3 94 chr2R 8833433 intron sns + chr2R 8833480 intron sns + chr2R 8833527 intron sns + chr2R_5_8830001 chr2R_8830001 RAL-301_75b 624 chr2R 8918123 8918144 chr2R 8918780 8918801 5 657 10.5 15.5 13.0 0.4 678 chr2R 8918123 3` UTR,3` UTR lin +,CG34219 - chr2R 8918462 exon CG34219 - chr2R 8918801 exon CG34219 - chr2R_5_8915001 chr2R_8915001 RAL-301_75b 625 chr2R 9010921 9010941 chr2R 9011131 9011151 5 210 11.5 11.0 11.2 0.4 230 chr2R 9010921 intron CG8172 - chr2R 9011036 intron CG8172 - chr2R 9011151 intron CG8172 - chr2R_5_9010001 chr2R_9010001 RAL-301_75b 626 chr2R 9151303 9151335 chr2R 9157773 9157805 Burdock 14 6470 5.0 4.0 4.5 2.5 6502 chr2R 9151303 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157805 intergenic CG8008 - chr2R_14_9150001 chr2R_9150001 RAL-301_75b 627 chr2R 9178076 9178107 chr2R 9178158 9178189 11 82 8.0 8.0 8.0 1.2 113 chr2R 9178076 3` UTR ltd - chr2R 9178132 3` UTR ltd - chr2R 9178189 3` UTR ltd - chr2R_11_9175001 chr2R_9175001 RAL-301_75b 628 chr2R 9212693 9212715 chr2R 9213178 9213201 roo 4 486 2.5 4.0 3.2 1.0 508 chr2R 9212693 intergenic CR45309 + chr2R 9212947 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-301_75b 629 chr2R 9236604 9236615 chr2R 9236691 9236702 4 87 2.0 2.0 2.0 1.3 98 chr2R 9236604 intron hig - chr2R 9236653 intron hig - chr2R 9236702 intron hig - chr2R_4_9235001 chr2R_9235001 RAL-301_75b 630 chr2R 9267980 9268010 chr2R 9268064 9268096 4 86 9.0 8.0 8.5 0.4 116 chr2R 9267980 intron Pkn - chr2R 9268038 intron Pkn - chr2R 9268096 intron Pkn - chr2R_4_9265001 chr2R_9265001 RAL-301_75b 631 chr2R 9271045 9271059 chr2R 9271122 9271136 7 77 7.0 9.5 8.2 0.8 91 chr2R 9271045 intron Pkn - chr2R 9271090 intron Pkn - chr2R 9271136 intron Pkn - chr2R_7_9270001 chr2R_9270001 RAL-301_75b 632 chr2R 9352253 9352255 chr2R 9361403 9361405 roo 4 9150 2.0 10.0 6.0 0.6 9152 chr2R 9352253 intron CG13954 - chr2R 9356829 intron CG13954 - chr2R 9361405 intron CG13954 - chr2R_4_9355001 chr2R_9355001 RAL-301_75b 633 chr2R 9451268 9451293 chr2R 9451348 9451374 4 81 5.0 6.5 5.8 0.6 106 chr2R 9451268 intron Camta + chr2R 9451321 intron Camta + chr2R 9451374 intron Camta + chr2R_4_9450001 chr2R_9450001 RAL-301_75b 634 chr2R 9480077 9480108 chr2R 9490608 9490639 roo 8 10531 4.0 1.5 2.8 2.1 10562 chr2R 9480077 intergenic not near genes chr2R 9485358 intergenic not near genes chr2R 9490639 intergenic not near genes chr2R_8_9485001 chr2R_9485001 RAL-301_75b 635 chr2R 9558391 9558410 chr2R 9561350 9561369 8 2959 20.5 28.0 24.2 0.3 2978 chr2R 9558391 intergenic not near genes chr2R 9559880 3` UTR,exon CR45281 -,Or45b + chr2R 9561369 3` UTR CR45281 - chr2R_8_9555001 chr2R_9555001 RAL-301_75b 636 chr2R 9561825 9561844 chr2R 9561913 9561932 9 87 0.0 1.5 0.8 5.0 107 chr2R 9561825 3` UTR,intron CR45281 -,CG1809 + chr2R 9561878 3` UTR,intron CR45281 -,CG1809 + chr2R 9561932 3` UTR,intron CR45281 -,CG1809 + chr2R_9_9560001 chr2R_9560001 RAL-301_75b 637 chr2R 9726608 9726644 chr2R 9734161 9734197 17.6 4 7553 1.0 4.0 2.5 1.1 7589 chr2R 9726608 intron sqa - chr2R 9730402 intron sqa - chr2R 9734197 intron sqa - chr2R_4_9730001 chr2R_9730001 RAL-301_75b 638 chr2R 9782448 9782476 chr2R 9782537 9782565 8 89 8.5 5.0 6.8 1.0 117 chr2R 9782448 intron CG1688 - chr2R 9782506 intron CG1688 - chr2R 9782565 intron CG1688 - chr2R_8_9780001 chr2R_9780001 RAL-301_75b 639 chr2R 9871047 9871049 chr2R 9871530 9871534 roo 6 484 0.0 0.0 0.0 6.0 487 chr2R 9871047 intron cbx - chr2R 9871290 intron cbx - chr2R 9871534 intron,5` UTR cbx -,CG18446 + chr2R_6_9870001 chr2R_9870001 RAL-301_75b 640 chr2R 10005861 10005873 chr2R 10007026 10007038 1360 6 1164 5.0 7.0 6.0 0.9 1177 chr2R 10005861 intron Pka-R2 - chr2R 10006450 intron Pka-R2 - chr2R 10007038 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-301_75b 641 chr2R 10008567 10008590 chr2R 10008645 10008668 5 78 3.0 0.0 1.5 2.0 101 chr2R 10008567 intron Pka-R2 - chr2R 10008618 intron Pka-R2 - chr2R 10008668 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-301_75b 642 chr2R 10053524 10053549 chr2R 10053627 10053652 4 103 6.0 10.5 8.2 0.4 128 chr2R 10053524 intron magu + chr2R 10053588 intron magu + chr2R 10053652 intron magu + chr2R_4_10050001 chr2R_10050001 RAL-301_75b 643 chr2R 10132204 10132220 chr2R 10132284 10132299 7 80 0.5 7.5 4.0 1.4 95 chr2R 10132204 intron gem + chr2R 10132252 intron gem + chr2R 10132299 intron gem + chr2R_7_10130001 chr2R_10130001 RAL-301_75b 644 chr2R 10171130 10171143 chr2R 10171214 10171227 5 83 3.0 3.5 3.2 1.2 97 chr2R 10171130 intron KCNQ - chr2R 10171178 intron KCNQ - chr2R 10171227 intron KCNQ - chr2R_5_10170001 chr2R_10170001 RAL-301_75b 645 chr2R 10172644 10172666 chr2R 10172756 10172778 7 112 1.5 0.0 0.8 3.9 134 chr2R 10172644 intron KCNQ - chr2R 10172711 intron KCNQ - chr2R 10172778 intron KCNQ - chr2R_7_10170001 chr2R_10170001 RAL-301_75b 646 chr2R 10176884 10176913 chr2R 10186051 10186080 roo 9 9167 4.5 1.5 3.0 2.2 9196 chr2R 10176884 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186080 intron KCNQ - chr2R_9_10180001 chr2R_10180001 RAL-301_75b 647 chr2R 10189201 10189233 chr2R 10189279 10189311 8 78 7.0 7.5 7.2 1.0 110 chr2R 10189201 intron KCNQ - chr2R 10189256 intron KCNQ - chr2R 10189311 intron KCNQ - chr2R_8_10185001 chr2R_10185001 RAL-301_75b 648 chr2R 10190453 10190465 chr2R 10190537 10190548 6 84 7.5 6.0 6.8 0.8 95 chr2R 10190453 intron KCNQ - chr2R 10190500 intron KCNQ - chr2R 10190548 intron KCNQ - chr2R_6_10190001 chr2R_10190001 RAL-301_75b 649 chr2R 10216193 10216220 chr2R 10216271 10216298 8 78 3.0 5.5 4.2 1.5 105 chr2R 10216193 intron,intron CG12912 -,Hr46 - chr2R 10216246 intron,intron CG12912 -,Hr46 - chr2R 10216298 intron,intron CG12912 -,Hr46 - chr2R_8_10215001 chr2R_10215001 RAL-301_75b 650 chr2R 10257158 10257192 chr2R 10257249 10257283 9 91 3.5 1.5 2.5 2.6 125 chr2R 10257158 intron CG12911 + chr2R 10257220 intron CG12911 + chr2R 10257283 intron CG12911 + chr2R_9_10255001 chr2R_10255001 RAL-301_75b 651 chr2R 10263186 10263211 chr2R 10263273 10263298 10 87 0.5 1.0 0.8 5.6 112 chr2R 10263186 3` UTR CR30009 - chr2R 10263242 3` UTR CR30009 - chr2R 10263298 3` UTR CR30009 - chr2R_10_10260001 chr2R_10260001 RAL-301_75b 652 chr2R 10290118 10290139 chr2R 10290199 10290220 12 81 1.5 1.0 1.2 5.5 102 chr2R 10290118 intron CAP + chr2R 10290169 intron CAP + chr2R 10290220 intron CAP + chr2R_12_10290001 chr2R_10290001 RAL-301_75b 653 chr2R 10300645 10300678 chr2R 10300741 10300774 6 96 7.5 11.0 9.2 0.6 129 chr2R 10300645 intron CAP + chr2R 10300710 intron CAP + chr2R 10300774 intron CAP + chr2R_6_10300001 chr2R_10300001 RAL-301_75b 654 chr2R 10313315 10313349 chr2R 10313400 10313437 17 88 2.0 4.0 3.0 4.2 122 chr2R 10313315 intergenic not near genes chr2R 10313376 intergenic not near genes chr2R 10313437 intergenic Ndg + chr2R_17_10310001 chr2R_10310001 RAL-301_75b 655 chr2R 10370508 10370520 chr2R 10370651 10370663 8 143 5.0 2.0 3.5 1.8 155 chr2R 10370508 intron CG42732 - chr2R 10370586 intron CG42732 - chr2R 10370663 intron CG42732 - chr2R_8_10370001 chr2R_10370001 RAL-301_75b 656 chr2R 10411821 10411831 chr2R 10411903 10411913 5 82 4.0 5.5 4.8 0.9 92 chr2R 10411821 intron CG42732 - chr2R 10411867 intron CG42732 - chr2R 10411913 intron CG42732 - chr2R_5_10410001 chr2R_10410001 RAL-301_75b 657 chr2R 10429019 10429044 chr2R 10429095 10429121 8 76 2.0 1.0 1.5 3.2 102 chr2R 10429019 intergenic not near genes chr2R 10429070 intergenic not near genes chr2R 10429121 intergenic not near genes chr2R_8_10425001 chr2R_10425001 RAL-301_75b 658 chr2R 10454098 10454129 chr2R 10454175 10454206 8 77 1.5 2.5 2.0 2.7 108 chr2R 10454098 intron,intron Galphao +,Cyp49a1 - chr2R 10454152 intron,intron Galphao +,Cyp49a1 - chr2R 10454206 intron,intron Galphao +,Cyp49a1 - chr2R_8_10450001 chr2R_10450001 RAL-301_75b 659 chr2R 10622365 10622377 chr2R 10637130 10637142 mdg1 5 14765 3.0 1.0 2.0 1.7 14777 chr2R 10622365 intron CG11883 + chr2R 10629754 intron CG11883 + chr2R 10637142 intron CG11883 + chr2R_5_10625001 chr2R_10625001 RAL-301_75b 660 chr2R 10700488 10700520 chr2R 10700600 10700635 5 114 0.0 1.5 0.8 2.8 147 chr2R 10700488 intron stan + chr2R 10700562 intron stan + chr2R 10700635 intron stan + chr2R_5_10700001 chr2R_10700001 RAL-301_75b 661 chr2R 10862575 10862603 chr2R 10862686 10862714 6 111 5.0 2.5 3.8 1.2 139 chr2R 10862575 intron CG30015 - chr2R 10862644 intron CG30015 - chr2R 10862714 intron CG30015 - chr2R_6_10860001 chr2R_10860001 RAL-301_75b 662 chr2R 10871655 10871676 chr2R 10871734 10871760 5 83 0.0 6.5 3.2 1.2 105 chr2R 10871655 intron CG30015 - chr2R 10871708 intron CG30015 - chr2R 10871760 intron CG30015 - chr2R_5_10870001 chr2R_10870001 RAL-301_75b 663 chr2R 10937799 10937830 chr2R 10937937 10937968 16 138 0.5 3.0 1.8 5.7 169 chr2R 10937799 intergenic not near genes chr2R 10937884 intergenic not near genes chr2R 10937968 intergenic Spn47C - chr2R_16_10935001 chr2R_10935001 RAL-301_75b 664 chr2R 10948035 10948060 chr2R 10955586 10955611 17.6 6 7550 0.0 6.0 3.0 1.5 7576 chr2R 10948035 intergenic not near genes chr2R 10951823 intergenic not near genes chr2R 10955611 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-301_75b 665 chr2R 10959090 10959102 chr2R 10959169 10959179 5 78 3.0 2.0 2.5 1.4 89 chr2R 10959090 intergenic not near genes chr2R 10959134 intergenic not near genes chr2R 10959179 intergenic not near genes chr2R_5_10955001 chr2R_10955001 RAL-301_75b 666 chr2R 10985092 10985098 chr2R 10985337 10985343 6 245 1.5 4.0 2.8 1.6 251 chr2R 10985092 intron luna - chr2R 10985218 intron luna - chr2R 10985343 intron luna - chr2R_6_10985001 chr2R_10985001 RAL-301_75b 667 chr2R 11009812 11009843 chr2R 11018986 11019013 roo 10 9173 1.0 5.5 3.2 2.4 9201 chr2R 11009812 intron luna - chr2R 11014412 intron luna - chr2R 11019013 intron luna - chr2R_10_11010001 chr2R_11010001 RAL-301_75b 668 chr2R 11019880 11019910 chr2R 11024946 11024976 jockey 6 5066 1.5 3.5 2.5 1.7 5096 chr2R 11019880 intron luna - chr2R 11022428 intron luna - chr2R 11024976 intron luna - chr2R_6_11020001 chr2R_11020001 RAL-301_75b 669 chr2R 11129829 11129848 chr2R 11129912 11129929 10 83 2.0 2.5 2.2 3.1 100 chr2R 11129829 intergenic not near genes chr2R 11129879 intergenic not near genes chr2R 11129929 intergenic not near genes chr2R_10_11125001 chr2R_11125001 RAL-301_75b 670 chr2R 11133409 11133420 chr2R 11133631 11133641 6 223 6.0 0.0 3.0 1.5 232 chr2R 11133409 intergenic not near genes chr2R 11133525 intergenic not near genes chr2R 11133641 intergenic not near genes chr2R_6_11130001 chr2R_11130001 RAL-301_75b 671 chr2R 11158882 11158893 chr2R 11159051 11159062 5 169 0.5 6.5 3.5 1.1 180 chr2R 11158882 intron CG13229 - chr2R 11158972 intron CG13229 - chr2R 11159062 intron CG13229 - chr2R_5_11155001 chr2R_11155001 RAL-301_75b 672 chr2R 11179270 11179287 chr2R 11179354 11179373 13 86 3.0 3.5 3.2 3.1 103 chr2R 11179270 intron shn + chr2R 11179322 intron shn + chr2R 11179373 intron shn + chr2R_13_11175001 chr2R_11175001 RAL-301_75b 673 chr2R 11207813 11207832 chr2R 11208005 11208023 BS 10 192 5.5 3.0 4.2 1.9 210 chr2R 11207813 intron shn + chr2R 11207918 intron shn + chr2R 11208023 intron shn + chr2R_10_11205001 chr2R_11205001 RAL-301_75b 674 chr2R 11297617 11297651 chr2R 11301938 11301972 flea 13 4321 4.0 4.0 4.0 2.6 4355 chr2R 11297617 intergenic CG42336 - chr2R 11299794 intergenic not near genes chr2R 11301972 5` UTR CG7741 + chr2R_13_11295001 chr2R_11295001 RAL-301_75b 675 chr2R 11344145 11344181 chr2R 11344241 11344273 11 96 0.0 5.0 2.5 3.1 128 chr2R 11344145 intergenic alphaTry - chr2R 11344209 intergenic alphaTry - chr2R 11344273 3` UTR alphaTry - chr2R_11_11340001 chr2R_11340001 RAL-301_75b 676 chr2R 11380539 11380555 chr2R 11380651 11380666 10 112 2.0 4.5 3.2 2.4 127 chr2R 11380539 3` UTR Sod3 - chr2R 11380602 3` UTR Sod3 - chr2R 11380666 3` UTR Sod3 - chr2R_10_11380001 chr2R_11380001 RAL-301_75b 677 chr2R 11391240 11391276 chr2R 11391315 11391352 11 75 3.5 3.0 3.2 2.6 112 chr2R 11391240 intron sprt - chr2R 11391296 intron sprt - chr2R 11391352 intron sprt - chr2R_11_11390001 chr2R_11390001 RAL-301_75b 678 chr2R 11398987 11399012 chr2R 11399192 11399218 7 207 2.5 5.5 4.0 1.4 231 chr2R 11398987 intergenic not near genes chr2R 11399102 intergenic not near genes chr2R 11399218 intergenic not near genes chr2R_7_11395001 chr2R_11395001 RAL-301_75b 679 chr2R 11415518 11415543 chr2R 11418667 11418692 opus 12 3148 6.5 11.5 9.0 1.2 3174 chr2R 11415518 intron Drip - chr2R 11417105 intron Drip - chr2R 11418692 intron Drip - chr2R_12_11415001 chr2R_11415001 RAL-301_75b 680 chr2R 11472654 11472679 chr2R 11473851 11473876 pogo 6 1197 6.5 6.5 6.5 0.8 1222 chr2R 11472654 intergenic not near genes chr2R 11473265 intergenic not near genes chr2R 11473876 intergenic not near genes chr2R_6_11470001 chr2R_11470001 RAL-301_75b 681 chr2R 11516795 11516811 chr2R 11516878 11516894 10 82 8.5 2.5 5.5 1.5 99 chr2R 11516795 intergenic not near genes chr2R 11516844 intergenic not near genes chr2R 11516894 intergenic not near genes chr2R_10_11515001 chr2R_11515001 RAL-301_75b 682 chr2R 11637328 11637333 chr2R 11637405 11637410 4 77 4.5 6.0 5.2 0.6 82 chr2R 11637328 intron CG9005 - chr2R 11637369 intron CG9005 - chr2R 11637410 intron CG9005 - chr2R_4_11635001 chr2R_11635001 RAL-301_75b 683 chr2R 11673829 11673845 chr2R 11677360 11677376 5 3531 2.0 8.5 5.2 0.8 3547 chr2R 11673829 intron,exon Roc2 -,Tret1-1 + chr2R 11675602 intron Roc2 - chr2R 11677376 intron,exon Roc2 -,Tret1-2 + chr2R_5_11675001 chr2R_11675001 RAL-301_75b 684 chr2R 11863860 11863887 chr2R 11863944 11863974 4 86 1.0 0.0 0.5 2.7 114 chr2R 11863860 intergenic CG42531 + chr2R 11863917 intergenic CG42531 + chr2R 11863974 intergenic CG42531 + chr2R_4_11860001 chr2R_11860001 RAL-301_75b 685 chr2R 11951347 11951372 chr2R 11951424 11951449 6 77 2.5 3.0 2.8 1.6 102 chr2R 11951347 intron CG13188 + chr2R 11951398 intron CG13188 + chr2R 11951449 intron CG13188 + chr2R_6_11950001 chr2R_11950001 RAL-301_75b 686 chr2R 8518781 8518796 chr2R 12066175 12066190 5 3547394 8.0 6.5 7.2 0.6 3547409 chr2R 8518781 intron mtt - chr2R 10292486 intron CAP + chr2R 12066190 intron CG8888 - chr2R_5_10290001 chr2R_10290001 RAL-301_75b 687 chr2R 12120408 12120431 chr2R 12120490 12120513 6 82 4.0 4.0 4.0 1.2 105 chr2R 12120408 intergenic not near genes chr2R 12120460 intergenic not near genes chr2R 12120513 intergenic not near genes chr2R_6_12120001 chr2R_12120001 RAL-301_75b 688 chr2R 12124831 12124862 chr2R 12124915 12124946 15 84 2.0 4.5 3.2 3.6 115 chr2R 12124831 intergenic not near genes chr2R 12124888 intergenic not near genes chr2R 12124946 intergenic not near genes chr2R_15_12120001 chr2R_12120001 RAL-301_75b 689 chr2R 12186003 12186037 chr2R 12186098 12186132 19 94 0.0 3.5 1.8 6.8 129 chr2R 12186003 intron Cyp6g1 + chr2R 12186068 intron Cyp6g1 + chr2R 12186132 intron Cyp6g1 + chr2R_19_12185001 chr2R_12185001 RAL-301_75b 690 chr2R 12187475 12187507 chr2R 12190091 12190124 31 2617 54.5 53.5 54.0 0.6 2649 chr2R 12187475 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_31_12185001 chr2R_12185001 RAL-301_75b 691 chr2R 12217575 12217596 chr2R 12217656 12217677 7 81 2.0 1.0 1.5 2.8 102 chr2R 12217575 intergenic not near genes chr2R 12217626 intergenic not near genes chr2R 12217677 intergenic not near genes chr2R_7_12215001 chr2R_12215001 RAL-301_75b 692 chr2R 12363380 12363409 chr2R 12363812 12363841 13 432 4.0 1.0 2.5 3.7 461 chr2R 12363380 intergenic CG30043 + chr2R 12363610 intergenic CG30043 + chr2R 12363841 intergenic not near genes chr2R_13_12360001 chr2R_12360001 RAL-301_75b 693 chr2R 12481140 12481167 chr2R 12482942 12482971 roo 8 1804 2.0 4.5 3.2 1.9 1831 chr2R 12481140 exon Dh44-R2 + chr2R 12482056 intron Dh44-R2 + chr2R 12482971 intron Dh44-R2 + chr2R_8_12480001 chr2R_12480001 RAL-301_75b 694 chr2R 12540475 12540493 chr2R 12540558 12540576 6 82 5.0 3.5 4.2 1.2 101 chr2R 12540475 intron fra + chr2R 12540526 intron fra + chr2R 12540576 intron fra + chr2R_6_12540001 chr2R_12540001 RAL-301_75b 695 chr2R 12549546 12549574 chr2R 12549662 12549689 6 116 28.0 15.0 21.5 0.3 143 chr2R 12549546 intron fra + chr2R 12549618 intron fra + chr2R 12549689 intron fra + chr2R_6_12545001 chr2R_12545001 RAL-301_75b 696 chr2R 12565565 12565594 chr2R 12565934 12565964 5 370 6.5 1.0 3.8 1.0 399 chr2R 12565565 intergenic not near genes chr2R 12565764 intergenic Cyp301a1 + chr2R 12565964 intergenic Cyp301a1 + chr2R_5_12565001 chr2R_12565001 RAL-301_75b 697 chr2R 12670370 12670401 chr2R 12670477 12670507 7 107 1.5 0.0 0.8 3.9 137 chr2R 12670370 intergenic CG42708 -,nemy - chr2R 12670438 intergenic CG42708 -,nemy - chr2R 12670507 3` UTR CG42708 - chr2R_7_12670001 chr2R_12670001 RAL-301_75b 698 chr2R 12702320 12702331 chr2R 12702401 12702412 10 81 4.0 0.5 2.2 3.1 92 chr2R 12702320 intergenic not near genes chr2R 12702366 intergenic not near genes chr2R 12702412 intergenic not near genes chr2R_10_12700001 chr2R_12700001 RAL-301_75b 699 chr2R 12707530 12707542 chr2R 12715896 12715908 roo 5 8366 0.0 2.5 1.2 2.3 8378 chr2R 12707530 intron CG42663 + chr2R 12711719 intron CG42663 + chr2R 12715908 intron CG42663 + chr2R_5_12710001 chr2R_12710001 RAL-301_75b 700 chr2R 12726323 12726352 chr2R 12726415 12726444 11 92 2.5 1.5 2.0 3.7 121 chr2R 12726323 intron CG42663 + chr2R 12726384 intron CG42663 + chr2R 12726444 intron CG42663 + chr2R_11_12725001 chr2R_12725001 RAL-301_75b 701 chr2R 12789292 12789328 chr2R 12797655 12797691 roo 10 8362 4.0 0.5 2.2 3.1 8399 chr2R 12789292 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797691 intron,3` UTR sca +,CR45137 - chr2R_10_12790001 chr2R_12790001 RAL-301_75b 702 chr2R 12819461 12819470 chr2R 12824526 12824535 jockey 5 5065 3.0 3.0 3.0 1.2 5074 chr2R 12819461 intergenic not near genes chr2R 12821998 intergenic not near genes chr2R 12824535 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-301_75b 703 chr2R 12895709 12895735 chr2R 12896140 12896165 5 431 0.5 4.0 2.2 1.6 456 chr2R 12895709 intron vg + chr2R 12895937 intron vg + chr2R 12896165 intron vg + chr2R_5_12895001 chr2R_12895001 RAL-301_75b 704 chr2R 13089757 13089783 chr2R 13089867 13089890 15 109 3.5 4.5 4.0 3.0 133 chr2R 13089757 intergenic not near genes chr2R 13089824 intergenic not near genes chr2R 13089890 intergenic not near genes chr2R_15_13085001 chr2R_13085001 RAL-301_75b 705 chr2R 13136838 13136870 chr2R 13141634 13141667 Doc 7 4797 5.5 2.0 3.8 1.5 4829 chr2R 13136838 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141667 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-301_75b 706 chr2R 13167427 13167459 chr2R 13167520 13167553 11 94 2.5 0.0 1.2 5.0 126 chr2R 13167427 intron GLaz - chr2R 13167490 intron GLaz - chr2R 13167553 intron GLaz - chr2R_11_13165001 chr2R_13165001 RAL-301_75b 707 chr2R 13218310 13218401 chr2R 13218393 13218478 8 79 1.0 1.0 1.0 4.0 168 chr2R 13218310 intron CG4630 - chr2R 13218394 intron CG4630 - chr2R 13218478 intron CG4630 - chr2R_8_13215001 chr2R_13215001 RAL-301_75b 708 chr2R 13258558 13258580 chr2R 13259804 13259823 9 1245 2.0 4.5 3.2 2.1 1265 chr2R 13258558 intergenic CG10799 + chr2R 13259190 intergenic not near genes chr2R 13259823 intergenic CG42319 + chr2R_9_13255001 chr2R_13255001 RAL-301_75b 709 chr2R 13305500 13305510 chr2R 13305581 13305592 8 82 9.0 4.0 6.5 1.1 92 chr2R 13305500 intergenic not near genes chr2R 13305546 intergenic not near genes chr2R 13305592 intergenic not near genes chr2R_8_13305001 chr2R_13305001 RAL-301_75b 710 chr2R 13309664 13309682 chr2R 13309779 13309799 6 117 1.5 0.0 0.8 3.3 135 chr2R 13309664 intergenic not near genes chr2R 13309732 intergenic not near genes chr2R 13309799 intergenic not near genes chr2R_6_13305001 chr2R_13305001 RAL-301_75b 711 chr2R 13364711 13364731 chr2R 13364797 13364817 8 86 4.0 3.0 3.5 1.8 106 chr2R 13364711 intergenic not near genes chr2R 13364764 intergenic not near genes chr2R 13364817 intergenic not near genes chr2R_8_13360001 chr2R_13360001 RAL-301_75b 712 chr2R 13403928 13403935 chr2R 13404013 13404020 8 85 3.0 3.5 3.2 1.9 92 chr2R 13403928 intergenic not near genes chr2R 13403974 intergenic not near genes chr2R 13404020 intergenic not near genes chr2R_8_13400001 chr2R_13400001 RAL-301_75b 713 chr2R 13418304 13418325 chr2R 13418390 13418411 14 86 1.5 7.5 4.5 2.5 107 chr2R 13418304 intron CG42321 - chr2R 13418358 intron CG42321 - chr2R 13418411 intron CG42321 - chr2R_14_13415001 chr2R_13415001 RAL-301_75b 714 chr2R 13437247 13437265 chr2R 13437419 13437437 6 171 2.0 3.0 2.5 1.7 190 chr2R 13437247 intron CG42321 - chr2R 13437342 intron CG42321 - chr2R 13437437 intron CG42321 - chr2R_6_13435001 chr2R_13435001 RAL-301_75b 715 chr2R 13498795 13498834 chr2R 13498871 13498909 5 76 7.5 2.0 4.8 0.9 114 chr2R 13498795 intron drk - chr2R 13498852 intron drk - chr2R 13498909 intron drk - chr2R_5_13495001 chr2R_13495001 RAL-301_75b 716 chr2R 13540411 13540422 chr2R 13540659 13540672 5 250 0.0 12.5 6.2 0.7 261 chr2R 13540411 intron CG6145 - chr2R 13540542 intron CG6145 - chr2R 13540672 intron CG6145 - chr2R_5_13540001 chr2R_13540001 RAL-301_75b 717 chr2R 13547086 13547106 chr2R 13547281 13547301 8 195 3.0 2.0 2.5 2.3 215 chr2R 13547086 intron CG6145 - chr2R 13547194 intron CG6145 - chr2R 13547301 intron CG6145 - chr2R_8_13545001 chr2R_13545001 RAL-301_75b 718 chr2R 13554755 13554773 chr2R 13554840 13554858 4 85 0.0 7.5 3.8 0.8 103 chr2R 13554755 intron Roe1 + chr2R 13554806 intron Roe1 + chr2R 13554858 intron Roe1 + chr2R_4_13550001 chr2R_13550001 RAL-301_75b 719 chr2R 13580501 13580531 chr2R 13580849 13580881 jockey 5 349 1.0 2.0 1.5 2.0 380 chr2R 13580501 3` UTR CG6191 - chr2R 13580691 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580881 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-301_75b 720 chr2R 13608279 13608298 chr2R 13608363 13608381 5 84 2.0 0.0 1.0 2.5 102 chr2R 13608279 intergenic CG12464 - chr2R 13608330 intergenic CG12464 - chr2R 13608381 intergenic CG12464 - chr2R_5_13605001 chr2R_13605001 RAL-301_75b 721 chr2R 13670093 13670101 chr2R 13670227 13670235 8 134 13.5 4.5 9.0 0.8 142 chr2R 13670093 intron,exon fas +,CG18368 + chr2R 13670164 intron,exon fas +,CG18368 + chr2R 13670235 intron,exon fas +,CG18368 + chr2R_8_13670001 chr2R_13670001 RAL-301_75b 722 chr2R 13690992 13691017 chr2R 13691073 13691098 11 80 10.0 2.5 6.2 1.5 106 chr2R 13690992 intron fas + chr2R 13691045 intron fas + chr2R 13691098 intron fas + chr2R_11_13690001 chr2R_13690001 RAL-301_75b 723 chr2R 13694631 13694651 chr2R 13694706 13694728 5 76 3.0 1.0 2.0 1.7 97 chr2R 13694631 intron fas + chr2R 13694680 intron fas + chr2R 13694728 intron fas + chr2R_5_13690001 chr2R_13690001 RAL-301_75b 724 chr2R 13721209 13721229 chr2R 13721291 13721311 6 82 3.0 2.0 2.5 1.7 102 chr2R 13721209 intron fas + chr2R 13721260 intron fas + chr2R 13721311 intron fas + chr2R_6_13720001 chr2R_13720001 RAL-301_75b 725 chr2R 13728134 13728167 chr2R 13735791 13735824 opus 10 7656 4.5 6.0 5.2 1.6 7690 chr2R 13728134 intron fas + chr2R 13731979 intron fas + chr2R 13735824 intron fas + chr2R_10_13730001 chr2R_13730001 RAL-301_75b 726 chr2R 13790328 13790343 chr2R 13790404 13790419 6 76 7.0 0.0 3.5 1.3 91 chr2R 13790328 intergenic not near genes chr2R 13790374 intergenic not near genes chr2R 13790419 intergenic not near genes chr2R_6_13790001 chr2R_13790001 RAL-301_75b 727 chr2R 13905605 13905633 chr2R 13907585 13907615 Rt1a 7 1982 2.5 5.0 3.8 1.5 2010 chr2R 13905605 intron shot - chr2R 13906610 intron shot - chr2R 13907615 intron shot - chr2R_7_13905001 chr2R_13905001 RAL-301_75b 728 chr2R 13925850 13925868 chr2R 13926025 13926044 11 176 3.5 3.5 3.5 2.4 194 chr2R 13925850 intron shot - chr2R 13925947 intron shot - chr2R 13926044 intron shot - chr2R_11_13925001 chr2R_13925001 RAL-301_75b 729 chr2R 14054807 14054835 chr2R 14054902 14054929 7 94 0.5 1.0 0.8 3.9 122 chr2R 14054807 intron mam + chr2R 14054868 intron mam + chr2R 14054929 intron mam + chr2R_7_14050001 chr2R_14050001 RAL-301_75b 730 chr2R 14093432 14093444 chr2R 14109583 14109595 11 16151 2.5 1.5 2.0 3.7 16163 chr2R 14093432 intron Prosap - chr2R 14101514 intron Prosap - chr2R 14109595 intron Prosap - chr2R_11_14100001 chr2R_14100001 RAL-301_75b 731 chr2R 14217695 14217701 chr2R 14217951 14217958 5 257 6.0 3.5 4.8 0.9 263 chr2R 14217695 intergenic not near genes chr2R 14217826 intergenic not near genes chr2R 14217958 intergenic not near genes chr2R_5_14215001 chr2R_14215001 RAL-301_75b 732 chr2R 14357555 14357572 chr2R 14357645 14357662 9 90 2.5 1.5 2.0 3.0 107 chr2R 14357555 intergenic CG8617 -,Arc1 - chr2R 14357608 intergenic Arc1 -,CG8617 - chr2R 14357662 intergenic Arc1 -,CG8617 - chr2R_9_14355001 chr2R_14355001 RAL-301_75b 733 chr2R 14394227 14394245 chr2R 14399016 14399034 Doc 7 4789 7.0 5.0 6.0 1.0 4807 chr2R 14394227 intergenic not near genes chr2R 14396630 intergenic not near genes chr2R 14399034 intergenic not near genes chr2R_7_14395001 chr2R_14395001 RAL-301_75b 734 chr2R 14423832 14423866 chr2R 14423912 14423946 10 80 1.5 3.0 2.2 3.1 114 chr2R 14423832 3` UTR CG17386 + chr2R 14423889 3` UTR CG17386 + chr2R 14423946 3` UTR CG17386 + chr2R_10_14420001 chr2R_14420001 RAL-301_75b 735 chr2R 14467318 14467325 chr2R 14476476 14476483 roo 7 9158 4.5 1.0 2.8 1.8 9165 chr2R 14467318 intergenic not near genes chr2R 14471900 intergenic not near genes chr2R 14476483 5` UTR CR44462 + chr2R_7_14470001 chr2R_14470001 RAL-301_75b 736 chr2R 14476768 14476770 chr2R 14476855 14476857 4 87 9.0 3.5 6.2 0.6 89 chr2R 14476768 intron CR44462 + chr2R 14476812 intron CR44462 + chr2R 14476857 intron CR44462 + chr2R_4_14475001 chr2R_14475001 RAL-301_75b 737 chr2R 14514486 14514499 chr2R 14514579 14514592 6 98 3.5 5.0 4.2 1.2 106 chr2R 14514486 intron,intron Cpr51A -,CG30197 + chr2R 14514539 intron,intron Cpr51A -,CG30197 + chr2R 14514592 intron,intron Cpr51A -,CG30197 + chr2R_6_14510001 chr2R_14510001 RAL-301_75b 738 chr2R 14530747 14530777 chr2R 14530829 14530859 5 82 1.0 1.0 1.0 2.5 112 chr2R 14530747 intron ttv + chr2R 14530803 intron ttv + chr2R 14530859 intron ttv + chr2R_5_14530001 chr2R_14530001 RAL-301_75b 739 chr2R 14536224 14536249 chr2R 14536338 14536364 12 115 0.5 3.0 1.8 4.3 140 chr2R 14536224 intron ttv + chr2R 14536294 intron ttv + chr2R 14536364 intron ttv + chr2R_12_14535001 chr2R_14535001 RAL-301_75b 740 chr2R 14681888 14681918 chr2R 14681975 14682005 9 87 4.0 3.5 3.8 1.9 117 chr2R 14681888 intron mspo - chr2R 14681946 intron mspo - chr2R 14682005 intron mspo - chr2R_9_14680001 chr2R_14680001 RAL-301_75b 741 chr2R 14699557 14699567 chr2R 14699830 14699840 6 272 1.5 3.5 2.5 1.7 283 chr2R 14699557 intron mspo - chr2R 14699698 intron mspo - chr2R 14699840 intron mspo - chr2R_6_14695001 chr2R_14695001 RAL-301_75b 742 chr2R 14733392 14733427 chr2R 14733480 14733515 11 88 3.5 3.0 3.2 2.6 123 chr2R 14733392 intergenic not near genes chr2R 14733454 intergenic not near genes chr2R 14733515 intergenic not near genes chr2R_11_14730001 chr2R_14730001 RAL-301_75b 743 chr2R 14766751 14766770 chr2R 14766835 14766854 6 84 2.0 4.0 3.0 1.5 103 chr2R 14766751 intron Spred - chr2R 14766802 intron Spred - chr2R 14766854 intron Spred - chr2R_6_14765001 chr2R_14765001 RAL-301_75b 744 chr2R 14786027 14786050 chr2R 14786120 14786143 8 93 0.0 1.5 0.8 4.4 116 chr2R 14786027 intron kn - chr2R 14786085 intron kn - chr2R 14786143 intron kn - chr2R_8_14785001 chr2R_14785001 RAL-301_75b 745 chr2R 14799865 14799882 chr2R 14799941 14799957 4 76 1.5 3.5 2.5 1.1 92 chr2R 14799865 intron kn - chr2R 14799911 intron kn - chr2R 14799957 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-301_75b 746 chr2R 14816105 14816133 chr2R 14816201 14816229 9 96 1.0 4.0 2.5 2.6 124 chr2R 14816105 intergenic not near genes chr2R 14816167 intergenic not near genes chr2R 14816229 intergenic not near genes chr2R_9_14815001 chr2R_14815001 RAL-301_75b 747 chr2R 14889213 14889237 chr2R 14897821 14897843 Max-element 9 8607 5.5 0.0 2.8 2.4 8630 chr2R 14889213 intergenic Cyp6a8 - chr2R 14893528 intergenic not near genes chr2R 14897843 intergenic not near genes chr2R_9_14890001 chr2R_14890001 RAL-301_75b 748 chr2R 14911701 14911721 chr2R 14911824 14911844 7 123 7.0 2.0 4.5 1.3 143 chr2R 14911701 intron CG10249 - chr2R 14911772 intron CG10249 - chr2R 14911844 intron CG10249 - chr2R_7_14910001 chr2R_14910001 RAL-301_75b 749 chr2R 14913666 14913688 chr2R 14913776 14913798 6 110 1.5 3.0 2.2 1.9 132 chr2R 14913666 intron CG10249 - chr2R 14913732 intron CG10249 - chr2R 14913798 intron CG10249 - chr2R_6_14910001 chr2R_14910001 RAL-301_75b 750 chr2R 14919094 14919108 chr2R 14919179 14919194 8 86 2.0 5.5 3.8 1.7 100 chr2R 14919094 intron CG10249 - chr2R 14919144 intron CG10249 - chr2R 14919194 intron CG10249 - chr2R_8_14915001 chr2R_14915001 RAL-301_75b 751 chr2R 14922141 14922222 chr2R 14922217 14922360 15 133 0.0 0.0 0.0 15.0 219 chr2R 14922141 intron CG10249 - chr2R 14922250 intron CG10249 - chr2R 14922360 intron CG10249 - chr2R_15_14920001 chr2R_14920001 RAL-301_75b 752 chr2R 14955674 14955695 chr2R 14955763 14955784 6 89 2.5 0.0 1.2 2.7 110 chr2R 14955674 intron aPKC - chr2R 14955729 intron aPKC - chr2R 14955784 intron aPKC - chr2R_6_14955001 chr2R_14955001 RAL-301_75b 753 chr2R 15004723 15004754 chr2R 15005052 15005083 jockey 13 328 2.5 2.0 2.2 4.1 360 chr2R 15004723 intergenic not near genes chr2R 15004903 intergenic not near genes chr2R 15005083 intergenic not near genes chr2R_13_15000001 chr2R_15000001 RAL-301_75b 754 chr2R 15058195 15058220 chr2R 15058327 15058352 11 132 5.0 4.5 4.8 1.9 157 chr2R 15058195 intergenic not near genes chr2R 15058274 intergenic not near genes chr2R 15058352 intergenic not near genes chr2R_11_15055001 chr2R_15055001 RAL-301_75b 755 chr2R 15084983 15085001 chr2R 15092032 15092049 297 5 7049 3.5 1.5 2.5 1.4 7066 chr2R 15084983 intergenic not near genes chr2R 15088516 intergenic not near genes chr2R 15092049 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-301_75b 756 chr2R 15119317 15119346 chr2R 15127798 15127827 Tirant 8 8480 1.5 3.5 2.5 2.3 8510 chr2R 15119317 intron chn + chr2R 15123572 intron chn + chr2R 15127827 intron chn + chr2R_8_15120001 chr2R_15120001 RAL-301_75b 757 chr2R 15133480 15133510 chr2R 15133559 15133589 8 79 2.0 0.5 1.2 3.6 109 chr2R 15133480 intron chn + chr2R 15133534 intron chn + chr2R 15133589 intron chn + chr2R_8_15130001 chr2R_15130001 RAL-301_75b 758 chr2R 15259070 15259091 chr2R 15259154 15259175 7 84 3.0 2.5 2.8 1.8 105 chr2R 15259070 intron ItgalphaPS4 + chr2R 15259122 intron ItgalphaPS4 + chr2R 15259175 intron ItgalphaPS4 + chr2R_7_15255001 chr2R_15255001 RAL-301_75b 759 chr2R 15296159 15296172 chr2R 15296242 15296255 7 82 2.5 6.0 4.2 1.3 96 chr2R 15296159 intron Trpm - chr2R 15296207 intron Trpm - chr2R 15296255 intron Trpm - chr2R_7_15295001 chr2R_15295001 RAL-301_75b 760 chr2R 15308782 15308806 chr2R 15308861 15308885 4 79 2.0 4.5 3.2 1.0 103 chr2R 15308782 intron Trpm - chr2R 15308834 intron Trpm - chr2R 15308885 intron Trpm - chr2R_4_15305001 chr2R_15305001 RAL-301_75b 761 chr2R 15375348 15375353 chr2R 15376165 15376170 5 817 0.0 1.0 0.5 3.3 822 chr2R 15375348 intergenic not near genes chr2R 15375759 intergenic not near genes chr2R 15376170 intergenic dup - chr2R_5_15375001 chr2R_15375001 RAL-301_75b 762 chr2R 15648957 15648988 chr2R 15649045 15649074 9 88 6.0 4.5 5.2 1.5 117 chr2R 15648957 intron CG42524 + chr2R 15649016 intron CG42524 + chr2R 15649074 intron CG42524 + chr2R_9_15645001 chr2R_15645001 RAL-301_75b 763 chr2R 15679106 15679130 chr2R 15679190 15679214 10 84 1.5 5.0 3.2 2.4 108 chr2R 15679106 intergenic CG8207 -,Vha14-1 - chr2R 15679160 intergenic CG8207 -,Vha14-1 - chr2R 15679214 intergenic Vha14-1 -,CG8207 - chr2R_10_15675001 chr2R_15675001 RAL-301_75b 764 chr2R 15721452 15721476 chr2R 15721530 15721551 6 78 1.5 0.0 0.8 3.3 99 chr2R 15721452 intergenic not near genes chr2R 15721502 intergenic not near genes chr2R 15721551 intergenic not near genes chr2R_6_15720001 chr2R_15720001 RAL-301_75b 765 chr2R 15794871 15794897 chr2R 15794960 15794986 10 89 1.5 0.0 0.8 5.6 115 chr2R 15794871 intron,5` UTR Zasp52 -,tun + chr2R 15794928 intron,5` UTR Zasp52 -,tun + chr2R 15794986 intron,intron Zasp52 -,tun + chr2R_10_15790001 chr2R_15790001 RAL-301_75b 766 chr2R 15857661 15857694 chr2R 15857744 15857777 6 83 1.0 1.5 1.2 2.7 116 chr2R 15857661 intergenic Gpo-1 -,CG12970 + chr2R 15857719 intergenic Gpo-1 -,CG12970 + chr2R 15857777 3` UTR Gpo-1 - chr2R_6_15855001 chr2R_15855001 RAL-301_75b 767 chr2R 15910811 15910831 chr2R 15910888 15910908 8 76 5.0 7.5 6.2 1.1 97 chr2R 15910811 intron sli - chr2R 15910860 intron sli - chr2R 15910908 intron sli - chr2R_8_15910001 chr2R_15910001 RAL-301_75b 768 chr2R 15987964 15987982 chr2R 15988043 15988061 9 79 1.5 4.0 2.8 2.4 97 chr2R 15987964 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988012 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988061 intron,5` UTR Strn-Mlck -,CR45021 + chr2R_9_15985001 chr2R_15985001 RAL-301_75b 769 chr2R 16518045 16518067 chr2R 16518121 16518143 7 76 5.5 1.5 3.5 1.6 98 chr2R 16518045 intron Sema-2a + chr2R 16518094 intron Sema-2a + chr2R 16518143 intron Sema-2a + chr2R_7_16515001 chr2R_16515001 RAL-301_75b 770 chr2R 16544856 16544869 chr2R 16544939 16544953 5 84 0.0 2.0 1.0 2.5 97 chr2R 16544856 intergenic not near genes chr2R 16544904 intergenic not near genes chr2R 16544953 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-301_75b 771 chr2R 16600135 16600152 chr2R 16600313 16600330 7 178 3.0 5.0 4.0 1.4 195 chr2R 16600135 intron,exon CG8303 -,CG5089 + chr2R 16600232 intron,exon CG8303 -,CG5089 + chr2R 16600330 intron,3` UTR CG8303 -,CG5089 + chr2R_7_16600001 chr2R_16600001 RAL-301_75b 772 chr2R 16617064 16617082 chr2R 16617143 16617161 11 79 3.0 3.0 3.0 2.8 97 chr2R 16617064 intron CG5065 + chr2R 16617112 intron CG5065 + chr2R 16617161 intron CG5065 + chr2R_11_16615001 chr2R_16615001 RAL-301_75b 773 chr2R 16618735 16618745 chr2R 16618811 16618821 8 76 0.0 5.0 2.5 2.3 86 chr2R 16618735 intron CG5065 + chr2R 16618778 intron CG5065 + chr2R 16618821 5` UTR CG5065 + chr2R_8_16615001 chr2R_16615001 RAL-301_75b 774 chr2R 16682081 16682110 chr2R 16682262 16682291 10 181 0.5 1.0 0.8 5.6 210 chr2R 16682081 intron CG30463 - chr2R 16682186 intron CG30463 - chr2R 16682291 intron CG30463 - chr2R_10_16680001 chr2R_16680001 RAL-301_75b 775 chr2R 16686874 16686888 chr2R 16686964 16686978 10 90 1.5 3.5 2.5 2.9 104 chr2R 16686874 intron CG30463 - chr2R 16686926 intron CG30463 - chr2R 16686978 intron CG30463 - chr2R_10_16685001 chr2R_16685001 RAL-301_75b 776 chr2R 16737137 16737162 chr2R 16737237 16737262 5 100 6.0 1.5 3.8 1.0 125 chr2R 16737137 3` UTR CG43104 - chr2R 16737200 3` UTR CG43104 - chr2R 16737262 exon CG43104 - chr2R_5_16735001 chr2R_16735001 RAL-301_75b 777 chr2R 16775646 16775670 chr2R 16775910 16775933 8 263 5.5 7.0 6.2 1.1 287 chr2R 16775646 3` UTR Arp53D + chr2R 16775790 intergenic Arp53D + chr2R 16775933 intergenic Arp53D + chr2R_8_16775001 chr2R_16775001 RAL-301_75b 778 chr2R 16787474 16787487 chr2R 16787556 16787569 7 82 4.0 0.0 2.0 2.3 95 chr2R 16787474 intron CG5522 + chr2R 16787522 intron CG5522 + chr2R 16787569 intron CG5522 + chr2R_7_16785001 chr2R_16785001 RAL-301_75b 779 chr2R 16893787 16893803 chr2R 16893869 16893885 7 83 1.5 3.5 2.5 2.0 98 chr2R 16893787 intron CG8910 - chr2R 16893836 intron CG8910 - chr2R 16893885 intron CG8910 - chr2R_7_16890001 chr2R_16890001 RAL-301_75b 780 chr2R 16915235 16915252 chr2R 16915322 16915339 4 86 0.5 1.0 0.8 2.2 104 chr2R 16915235 intergenic not near genes chr2R 16915287 intergenic not near genes chr2R 16915339 intergenic not near genes chr2R_4_16915001 chr2R_16915001 RAL-301_75b 781 chr2R 16920441 16920463 chr2R 16920516 16920537 20 76 0.0 0.0 0.0 20.0 96 chr2R 16920441 intergenic not near genes chr2R 16920489 intergenic not near genes chr2R 16920537 intergenic not near genes chr2R_20_16920001 chr2R_16920001 RAL-301_75b 782 chr2R 16975203 16975221 chr2R 16975280 16975298 7 77 2.5 2.5 2.5 2.0 95 chr2R 16975203 intron Cbp53E + chr2R 16975250 intron Cbp53E + chr2R 16975298 intron Cbp53E + chr2R_7_16975001 chr2R_16975001 RAL-301_75b 783 chr2R 17176358 17176380 chr2R 17182548 17182570 diver 7 6190 2.5 2.0 2.2 2.2 6212 chr2R 17176358 intergenic not near genes chr2R 17179464 intergenic not near genes chr2R 17182570 intergenic not near genes chr2R_7_17175001 chr2R_17175001 RAL-301_75b 784 chr2R 17226436 17226460 chr2R 17226780 17226804 11 343 0.0 1.5 0.8 6.1 368 chr2R 17226436 intron mbl + chr2R 17226620 intron mbl + chr2R 17226804 intron mbl + chr2R_11_17225001 chr2R_17225001 RAL-301_75b 785 chr2R 17236514 17236535 chr2R 17241718 17241739 copia 5 5204 1.5 1.0 1.2 2.3 5225 chr2R 17236514 intron mbl + chr2R 17239126 intron mbl + chr2R 17241739 intron mbl + chr2R_5_17235001 chr2R_17235001 RAL-301_75b 786 chr2R 17389266 17389304 chr2R 17389357 17389395 19 90 1.5 1.5 1.5 7.6 129 chr2R 17389266 intergenic CR44344 - chr2R 17389330 intergenic CR44344 - chr2R 17389395 intergenic CR44344 - chr2R_19_17385001 chr2R_17385001 RAL-301_75b 787 chr2R 17459011 17459024 chr2R 17459097 17459109 8 85 4.5 4.0 4.2 1.5 98 chr2R 17459011 intron CG14478 + chr2R 17459060 intron CG14478 + chr2R 17459109 intron CG14478 + chr2R_8_17455001 chr2R_17455001 RAL-301_75b 788 chr2R 17470330 17470348 chr2R 17470410 17470428 8 80 4.5 1.0 2.8 2.1 98 chr2R 17470330 intron qkr54B + chr2R 17470379 intron qkr54B + chr2R 17470428 intron qkr54B + chr2R_8_17470001 chr2R_17470001 RAL-301_75b 789 chr2R 17485913 17485938 chr2R 17490675 17490700 F-element 8 4762 6.0 0.0 3.0 2.0 4787 chr2R 17485913 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488306 intron NT5E-2 + chr2R 17490700 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 RAL-301_75b 790 chr2R 17645078 17645097 chr2R 17645624 17645639 6 545 2.5 0.0 1.2 2.7 561 chr2R 17645078 intergenic not near genes chr2R 17645358 intergenic not near genes chr2R 17645639 intergenic not near genes chr2R_6_17645001 chr2R_17645001 RAL-301_75b 791 chr2R 17657330 17657351 chr2R 17657428 17657449 11 98 2.5 6.0 4.2 2.1 119 chr2R 17657330 intron CCHa1-R - chr2R 17657390 intron CCHa1-R - chr2R 17657449 intron CCHa1-R - chr2R_11_17655001 chr2R_17655001 RAL-301_75b 792 chr2R 17708395 17708417 chr2R 17708476 17708498 4 81 1.0 3.0 2.0 1.3 103 chr2R 17708395 intron CG6424 - chr2R 17708446 intron CG6424 - chr2R 17708498 intron CG6424 - chr2R_4_17705001 chr2R_17705001 RAL-301_75b 793 chr2R 17782364 17782393 chr2R 17783566 17783596 pogo 9 1202 1.0 1.0 1.0 4.5 1232 chr2R 17782364 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783596 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RAL-301_75b 794 chr2R 17784028 17784057 chr2R 17784269 17784296 pogo 9 241 5.5 3.0 4.2 1.7 268 chr2R 17784028 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784296 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RAL-301_75b 795 chr2R 17785094 17785102 chr2R 17785180 17785190 7 88 3.0 6.5 4.8 1.2 96 chr2R 17785094 intergenic not near genes chr2R 17785142 intergenic not near genes chr2R 17785190 intergenic not near genes chr2R_7_17785001 chr2R_17785001 RAL-301_75b 796 chr2R 17835033 17835061 chr2R 17835126 17835155 5 93 1.5 4.0 2.8 1.3 122 chr2R 17835033 intron grh + chr2R 17835094 intron grh + chr2R 17835155 intron grh + chr2R_5_17835001 chr2R_17835001 RAL-301_75b 797 chr2R 17872920 17872940 chr2R 17873278 17873298 13 358 2.5 0.5 1.5 5.2 378 chr2R 17872920 intergenic not near genes chr2R 17873109 intergenic not near genes chr2R 17873298 intergenic not near genes chr2R_13_17870001 chr2R_17870001 RAL-301_75b 798 chr2R 17885113 17885136 chr2R 17885208 17885231 10 94 3.0 4.5 3.8 2.1 118 chr2R 17885113 intron Elk + chr2R 17885172 intron Elk + chr2R 17885231 intron Elk + chr2R_10_17885001 chr2R_17885001 RAL-301_75b 799 chr2R 17966157 17966167 chr2R 17966237 17966248 4 80 3.5 1.0 2.2 1.2 91 chr2R 17966157 intergenic not near genes chr2R 17966202 intergenic not near genes chr2R 17966248 intergenic not near genes chr2R_4_17965001 chr2R_17965001 RAL-301_75b 800 chr2R 17997160 17997192 chr2R 17997242 17997274 4 82 2.0 1.0 1.5 1.6 114 chr2R 17997160 intron dpr13 - chr2R 17997217 intron dpr13 - chr2R 17997274 intron dpr13 - chr2R_4_17995001 chr2R_17995001 RAL-301_75b 801 chr2R 18003224 18003229 chr2R 18003301 18003305 4 76 1.5 2.5 2.0 1.3 81 chr2R 18003224 intron dpr13 - chr2R 18003264 intron dpr13 - chr2R 18003305 intron dpr13 - chr2R_4_18000001 chr2R_18000001 RAL-301_75b 802 chr2R 18045664 18045698 chr2R 18046016 18046050 jockey 6 352 5.5 6.5 6.0 0.9 386 chr2R 18045664 intergenic not near genes chr2R 18045857 intergenic not near genes chr2R 18046050 intergenic CG5767 - chr2R_6_18045001 chr2R_18045001 RAL-301_75b 803 chr2R 18073862 18073891 chr2R 18073946 18073975 10 84 3.0 3.0 3.0 2.5 113 chr2R 18073862 intron CG34386 + chr2R 18073918 intron CG34386 + chr2R 18073975 intron CG34386 + chr2R_10_18070001 chr2R_18070001 RAL-301_75b 804 chr2R 18111684 18111710 chr2R 18115552 18115578 F-element 10 3868 0.0 0.5 0.2 8.3 3894 chr2R 18111684 intergenic not near genes chr2R 18113631 intergenic not near genes chr2R 18115578 intergenic not near genes chr2R_10_18110001 chr2R_18110001 RAL-301_75b 805 chr2R 18142916 18142922 chr2R 18143155 18143160 7 239 20.0 13.5 16.8 0.4 244 chr2R 18142916 intron,5` UTR pAbp +,snoRNA:Psi18S-1347a + chr2R 18143038 intron,5` UTR pAbp +,snoRNA:Psi18S-1347b + chr2R 18143160 intron pAbp + chr2R_7_18140001 chr2R_18140001 RAL-301_75b 806 chr2R 18197077 18197089 chr2R 18197155 18197167 7 78 2.5 3.0 2.8 1.8 90 chr2R 18197077 intergenic not near genes chr2R 18197122 intergenic not near genes chr2R 18197167 intergenic not near genes chr2R_7_18195001 chr2R_18195001 RAL-301_75b 807 chr2R 18308289 18308316 chr2R 18308395 18308422 12 106 3.5 3.0 3.2 2.9 133 chr2R 18308289 intron sbb - chr2R 18308356 intron sbb - chr2R 18308422 intron sbb - chr2R_12_18305001 chr2R_18305001 RAL-301_75b 808 chr2R 18358383 18358419 chr2R 18372595 18372629 roo 7 14212 0.0 0.0 0.0 7.0 14246 chr2R 18358383 intergenic not near genes chr2R 18365506 intergenic not near genes chr2R 18372629 intergenic not near genes chr2R_7_18365001 chr2R_18365001 RAL-301_75b 809 chr2R 18398158 18398193 chr2R 18398253 18398288 7 94 3.0 1.0 2.0 2.3 130 chr2R 18398158 intron GstE10 - chr2R 18398223 intron GstE10 - chr2R 18398288 intron GstE10 - chr2R_7_18395001 chr2R_18395001 RAL-301_75b 810 chr2R 18405756 18405773 chr2R 18405837 18405854 5 81 4.0 0.0 2.0 1.7 98 chr2R 18405756 intergenic GstE6 +,GstE5 + chr2R 18405805 intergenic GstE6 +,GstE5 + chr2R 18405854 intergenic GstE6 + chr2R_5_18405001 chr2R_18405001 RAL-301_75b 811 chr2R 18511588 18511592 chr2R 18511674 18511678 4 86 1.5 1.0 1.2 1.8 90 chr2R 18511588 intergenic not near genes chr2R 18511633 intergenic not near genes chr2R 18511678 intergenic not near genes chr2R_4_18510001 chr2R_18510001 RAL-301_75b 812 chr2R 18550583 18550600 chr2R 18550672 18550688 8 88 4.5 5.0 4.8 1.4 105 chr2R 18550583 intergenic not near genes chr2R 18550636 intergenic not near genes chr2R 18550688 intergenic not near genes chr2R_8_18550001 chr2R_18550001 RAL-301_75b 813 chr2R 18575804 18575804 chr2R 18581989 18581992 3S18 4 6187 5.0 3.5 4.2 0.8 6188 chr2R 18575804 intron GEFmeso - chr2R 18578898 intron GEFmeso - chr2R 18581992 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-301_75b 814 chr2R 18575808 18575827 chr2R 18581984 18582015 3S18 13 6187 3.0 2.5 2.8 3.4 6207 chr2R 18575808 intron GEFmeso - chr2R 18578912 intron GEFmeso - chr2R 18582015 intron GEFmeso - chr2R_13_18575001 chr2R_18575001 RAL-301_75b 815 chr2R 18590873 18590900 chr2R 18600025 18600052 roo 8 9151 1.5 4.0 2.8 2.1 9179 chr2R 18590873 intron GEFmeso - chr2R 18595462 intron GEFmeso - chr2R 18600052 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 RAL-301_75b 816 chr2R 18600549 18600574 chr2R 18600625 18600650 13 75 1.5 0.0 0.8 7.2 101 chr2R 18600549 intron GEFmeso - chr2R 18600600 intron GEFmeso - chr2R 18600650 intron GEFmeso - chr2R_13_18600001 chr2R_18600001 RAL-301_75b 817 chr2R 18692901 18692921 chr2R 18692988 18693008 6 87 5.0 3.5 4.2 1.2 107 chr2R 18692901 intron Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693008 intron Sik3 + chr2R_6_18690001 chr2R_18690001 RAL-301_75b 818 chr2R 18715203 18715234 chr2R 18715282 18715313 8 79 2.5 2.0 2.2 2.5 110 chr2R 18715203 intergenic not near genes chr2R 18715258 intergenic not near genes chr2R 18715313 intergenic not near genes chr2R_8_18715001 chr2R_18715001 RAL-301_75b 819 chr2R 18745093 18745104 chr2R 18745198 18745209 4 105 1.0 9.0 5.0 0.7 116 chr2R 18745093 intron Hs3st-A + chr2R 18745151 intron Hs3st-A + chr2R 18745209 intron Hs3st-A + chr2R_4_18745001 chr2R_18745001 RAL-301_75b 820 chr2R 18808066 18808085 chr2R 18808155 18808174 9 89 0.5 1.0 0.8 5.0 108 chr2R 18808066 intergenic CG15096 - chr2R 18808120 intergenic CG15096 - chr2R 18808174 intergenic CG15096 - chr2R_9_18805001 chr2R_18805001 RAL-301_75b 821 chr2R 18819055 18819068 chr2R 18819132 18819145 4 77 0.0 0.5 0.2 3.3 90 chr2R 18819055 intergenic Phb2 + chr2R 18819100 intergenic Phb2 + chr2R 18819145 intergenic Phb2 + chr2R_4_18815001 chr2R_18815001 RAL-301_75b 822 chr2R 18953157 18953191 chr2R 18953244 18953278 13 87 3.0 1.5 2.2 4.1 121 chr2R 18953157 intron sano + chr2R 18953218 intron sano + chr2R 18953278 intron sano + chr2R_13_18950001 chr2R_18950001 RAL-301_75b 823 chr2R 18992015 18992036 chr2R 18992156 18992177 11 141 7.5 5.5 6.5 1.5 162 chr2R 18992015 intron tn + chr2R 18992096 intron tn + chr2R 18992177 intron tn + chr2R_11_18990001 chr2R_18990001 RAL-301_75b 824 chr2R 19010752 19010755 chr2R 19010868 19010872 4 116 5.0 1.5 3.2 1.0 120 chr2R 19010752 intergenic not near genes chr2R 19010812 intergenic not near genes chr2R 19010872 intergenic not near genes chr2R_4_19010001 chr2R_19010001 RAL-301_75b 825 chr2R 19012935 19012968 chr2R 19013029 19013062 19 94 2.0 5.5 3.8 4.0 127 chr2R 19012935 intergenic not near genes chr2R 19012998 intergenic not near genes chr2R 19013062 intergenic not near genes chr2R_19_19010001 chr2R_19010001 RAL-301_75b 826 chr2R 19168740 19168745 chr2R 19168821 19168826 5 80 6.5 5.0 5.8 0.7 86 chr2R 19168740 intron CG10737 + chr2R 19168783 intron CG10737 + chr2R 19168826 intron CG10737 + chr2R_5_19165001 chr2R_19165001 RAL-301_75b 827 chr2R 19209572 19209578 chr2R 19209776 19209782 4 204 2.0 8.0 5.0 0.7 210 chr2R 19209572 intron hppy + chr2R 19209677 intron hppy + chr2R 19209782 intron hppy + chr2R_4_19205001 chr2R_19205001 RAL-301_75b 828 chr2R 19357312 19357344 chr2R 19357399 19357431 9 87 0.0 0.0 0.0 9.0 119 chr2R 19357312 intergenic CG11961 + chr2R 19357372 intergenic CG11961 + chr2R 19357431 intergenic CG11961 + chr2R_9_19355001 chr2R_19355001 RAL-301_75b 829 chr2R 19546222 19546237 chr2R 19546299 19546314 7 77 2.0 4.5 3.2 1.7 92 chr2R 19546222 intron sm - chr2R 19546268 intron sm - chr2R 19546314 intron sm - chr2R_7_19545001 chr2R_19545001 RAL-301_75b 830 chr2R 19603973 19603998 chr2R 19604062 19604080 6 88 0.0 2.0 1.0 3.0 107 chr2R 19603973 intron sm - chr2R 19604026 intron sm - chr2R 19604080 intron sm - chr2R_6_19600001 chr2R_19600001 RAL-301_75b 831 chr2R 19714705 19714729 chr2R 19714781 19714805 10 76 1.0 2.0 1.5 4.0 100 chr2R 19714705 3` UTR CG8517 + chr2R 19714755 3` UTR CG8517 + chr2R 19714805 3` UTR CG8517 + chr2R_10_19710001 chr2R_19710001 RAL-301_75b 832 chr2R 19776593 19776623 chr2R 19779916 19779945 jockey 10 3322 2.0 3.5 2.8 2.6 3352 chr2R 19776593 intergenic not near genes chr2R 19778269 intergenic not near genes chr2R 19779945 intergenic not near genes chr2R_10_19775001 chr2R_19775001 RAL-301_75b 833 chr2R 19784585 19784610 chr2R 19784682 19784707 6 96 1.0 5.0 3.0 1.5 122 chr2R 19784585 5` UTR CR45231 + chr2R 19784646 5` UTR CR45231 + chr2R 19784707 5` UTR CR45231 + chr2R_6_19780001 chr2R_19780001 RAL-301_75b 834 chr2R 19837715 19837743 chr2R 19837813 19837842 10 99 3.5 7.0 5.2 1.6 127 chr2R 19837715 intergenic not near genes chr2R 19837778 intergenic not near genes chr2R 19837842 intergenic not near genes chr2R_10_19835001 chr2R_19835001 RAL-301_75b 835 chr2R 19845085 19845113 chr2R 19845165 19845194 13 81 2.0 4.5 3.2 3.1 109 chr2R 19845085 intergenic not near genes chr2R 19845140 intergenic not near genes chr2R 19845194 intergenic not near genes chr2R_13_19845001 chr2R_19845001 RAL-301_75b 836 chr2R 19914843 19914866 chr2R 19922255 19922278 mdg1 5 7412 4.0 2.5 3.2 1.2 7435 chr2R 19914843 intergenic not near genes chr2R 19918560 intergenic not near genes chr2R 19922278 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-301_75b 837 chr2R 19957435 19957453 chr2R 19962633 19962654 copia 6 5201 2.0 4.5 3.2 1.4 5219 chr2R 19957435 intergenic CG44623 + chr2R 19960044 intergenic not near genes chr2R 19962654 intergenic not near genes chr2R_6_19960001 chr2R_19960001 RAL-301_75b 838 chr2R 20080603 20080624 chr2R 20080680 20080701 9 77 0.0 2.5 1.2 4.1 98 chr2R 20080603 intergenic not near genes chr2R 20080652 intergenic not near genes chr2R 20080701 intergenic not near genes chr2R_9_20080001 chr2R_20080001 RAL-301_75b 839 chr2R 20095395 20095423 chr2R 20095510 20095537 14 114 3.0 3.0 3.0 3.5 142 chr2R 20095395 intergenic not near genes chr2R 20095466 intergenic not near genes chr2R 20095537 intergenic not near genes chr2R_14_20095001 chr2R_20095001 RAL-301_75b 840 chr2R 20125738 20125742 chr2R 20125814 20125818 4 76 7.5 8.0 7.8 0.5 80 chr2R 20125738 intergenic not near genes chr2R 20125778 intergenic not near genes chr2R 20125818 intergenic not near genes chr2R_4_20125001 chr2R_20125001 RAL-301_75b 841 chr2R 20223949 20223976 chr2R 20224034 20224061 10 84 5.5 0.5 3.0 2.5 112 chr2R 20223949 intergenic not near genes chr2R 20224005 intergenic not near genes chr2R 20224061 intergenic not near genes chr2R_10_20220001 chr2R_20220001 RAL-301_75b 842 chr2R 20405084 20405114 chr2R 20406000 20406030 5 916 0.0 2.0 1.0 2.5 946 chr2R 20405084 intergenic not near genes chr2R 20405557 intergenic not near genes chr2R 20406030 intergenic not near genes chr2R_5_20405001 chr2R_20405001 RAL-301_75b 843 chr2R 20523042 20523070 chr2R 20523153 20523181 11 111 2.5 4.5 3.5 2.4 139 chr2R 20523042 intergenic not near genes chr2R 20523112 intergenic not near genes chr2R 20523181 intergenic not near genes chr2R_11_20520001 chr2R_20520001 RAL-301_75b 844 chr2R 20528760 20528785 chr2R 20528930 20528959 10 173 1.0 3.0 2.0 3.3 199 chr2R 20528760 exon CG30151 - chr2R 20528860 exon CG30151 - chr2R 20528959 exon CG30151 - chr2R_10_20525001 chr2R_20525001 RAL-301_75b 845 chr2R 20572573 20572586 chr2R 20572661 20572676 9 89 5.0 3.0 4.0 1.8 103 chr2R 20572573 intron qsm - chr2R 20572624 intron qsm - chr2R 20572676 intron qsm - chr2R_9_20570001 chr2R_20570001 RAL-301_75b 846 chr2R 20739446 20739473 chr2R 20744214 20744241 F-element 5 4768 3.0 1.0 2.0 1.7 4795 chr2R 20739446 intron dpr + chr2R 20741844 intron dpr + chr2R 20744241 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-301_75b 847 chr2R 20783314 20783333 chr2R 20788083 20788105 F-element 8 4771 2.5 3.5 3.0 2.0 4791 chr2R 20783314 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788105 intergenic CG43666 - chr2R_8_20785001 chr2R_20785001 RAL-301_75b 848 chr2R 20891377 20891391 chr2R 20891469 20891483 5 92 5.5 0.0 2.8 1.3 106 chr2R 20891377 intron otp - chr2R 20891430 intron otp - chr2R 20891483 intron otp - chr2R_5_20890001 chr2R_20890001 RAL-301_75b 849 chr2R 20962907 20962937 chr2R 20963005 20963035 14 98 0.5 6.0 3.2 3.3 128 chr2R 20962907 intergenic not near genes chr2R 20962971 intergenic not near genes chr2R 20963035 intergenic not near genes chr2R_14_20960001 chr2R_20960001 RAL-301_75b 850 chr2R 21083170 21083191 chr2R 21083256 21083277 4 86 2.0 11.0 6.5 0.5 107 chr2R 21083170 intron Treh + chr2R 21083224 intron Treh + chr2R 21083277 intron Treh + chr2R_4_21080001 chr2R_21080001 RAL-301_75b 851 chr2R 21110791 21110791 chr2R 21110884 21110884 4 93 4.5 3.5 4.0 0.8 93 chr2R 21110791 intron ktub + chr2R 21110838 intron ktub + chr2R 21110884 intron ktub + chr2R_4_21110001 chr2R_21110001 RAL-301_75b 852 chr2R 21188221 21188234 chr2R 21188302 21188315 4 81 6.0 4.5 5.2 0.6 94 chr2R 21188221 exon tud + chr2R 21188268 intron tud + chr2R 21188315 intron tud + chr2R_4_21185001 chr2R_21185001 RAL-301_75b 853 chr2R 21370517 21370536 chr2R 21370624 21370643 6 107 3.0 2.0 2.5 1.7 126 chr2R 21370517 intron cv-2 - chr2R 21370580 intron cv-2 - chr2R 21370643 intron cv-2 - chr2R_6_21370001 chr2R_21370001 RAL-301_75b 854 chr2R 21408376 21408400 chr2R 21408468 21408492 5 92 1.5 0.0 0.8 2.8 116 chr2R 21408376 intron Sdc - chr2R 21408434 intron Sdc - chr2R 21408492 intron Sdc - chr2R_5_21405001 chr2R_21405001 RAL-301_75b 855 chr2R 21461458 21461485 chr2R 21461564 21461591 12 106 2.0 0.5 1.2 5.5 133 chr2R 21461458 intron Sdc - chr2R 21461524 intron Sdc - chr2R 21461591 intron Sdc - chr2R_12_21460001 chr2R_21460001 RAL-301_75b 856 chr2R 21467526 21467544 chr2R 21467613 21467630 10 87 2.5 0.0 1.2 4.5 104 chr2R 21467526 intron Sdc - chr2R 21467578 intron Sdc - chr2R 21467630 intron Sdc - chr2R_10_21465001 chr2R_21465001 RAL-301_75b 857 chr2R 21738284 21738290 chr2R 21747444 21747449 roo 6 9160 0.5 0.0 0.2 5.0 9165 chr2R 21738284 intergenic not near genes chr2R 21742866 intergenic not near genes chr2R 21747449 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-301_75b 858 chr2R 21803873 21803894 chr2R 21803955 21803976 12 81 0.0 3.0 1.5 4.8 103 chr2R 21803873 5` UTR CR9284 + chr2R 21803924 5` UTR CR9284 + chr2R 21803976 5` UTR CR9284 + chr2R_12_21800001 chr2R_21800001 RAL-301_75b 859 chr2R 21857347 21857358 chr2R 21857438 21857449 5 91 4.0 3.5 3.8 1.0 102 chr2R 21857347 intergenic not near genes chr2R 21857398 intergenic not near genes chr2R 21857449 intergenic not near genes chr2R_5_21855001 chr2R_21855001 RAL-301_75b 860 chr2R 21922590 21922625 chr2R 21922667 21922701 8 77 4.0 2.0 3.0 2.0 111 chr2R 21922590 intron Fili + chr2R 21922646 intron Fili + chr2R 21922701 intron Fili + chr2R_8_21920001 chr2R_21920001 RAL-301_75b 861 chr2R 21927519 21927546 chr2R 21927600 21927629 9 83 4.5 2.0 3.2 2.1 110 chr2R 21927519 intron Fili + chr2R 21927574 intron Fili + chr2R 21927629 intron Fili + chr2R_9_21925001 chr2R_21925001 RAL-301_75b 862 chr2R 21946769 21946803 chr2R 21946865 21946899 11 96 5.0 6.5 5.8 1.6 130 chr2R 21946769 intergenic not near genes chr2R 21946834 intergenic not near genes chr2R 21946899 intergenic not near genes chr2R_11_21945001 chr2R_21945001 RAL-301_75b 863 chr2R 22003089 22003122 chr2R 22003175 22003208 11 86 3.0 2.5 2.8 2.9 119 chr2R 22003089 intron CG34370 - chr2R 22003148 intron CG34370 - chr2R 22003208 intron CG34370 - chr2R_11_22000001 chr2R_22000001 RAL-301_75b 864 chr2R 22029527 22029532 chr2R 22029603 22029610 5 77 0.5 2.5 1.5 2.0 83 chr2R 22029527 intron CG34370 - chr2R 22029568 intron CG34370 - chr2R 22029610 intron CG34370 - chr2R_5_22025001 chr2R_22025001 RAL-301_75b 865 chr2R 22072690 22072707 chr2R 22072775 22072792 8 85 1.5 1.0 1.2 3.6 102 chr2R 22072690 intron CG11474 - chr2R 22072741 intron CG11474 - chr2R 22072792 intron CG11474 - chr2R_8_22070001 chr2R_22070001 RAL-301_75b 866 chr2R 22075836 22075859 chr2R 22075912 22075935 9 76 3.0 2.0 2.5 2.6 99 chr2R 22075836 intergenic GlcT-1 + chr2R 22075886 intergenic GlcT-1 + chr2R 22075935 intergenic GlcT-1 + chr2R_9_22075001 chr2R_22075001 RAL-301_75b 867 chr2R 22185673 22185689 chr2R 22185772 22185784 12 98 1.5 0.0 0.8 6.7 111 chr2R 22185673 3` UTR MED16 + chr2R 22185728 3` UTR MED16 + chr2R 22185784 3` UTR MED16 + chr2R_12_22185001 chr2R_22185001 RAL-301_75b 868 chr2R 22292074 22292087 chr2R 22292161 22292174 6 87 3.0 2.0 2.5 1.7 100 chr2R 22292074 5` UTR CR43422 + chr2R 22292124 5` UTR CR43422 + chr2R 22292174 5` UTR CR43422 + chr2R_6_22290001 chr2R_22290001 RAL-301_75b 869 chr2R 22349691 22349725 chr2R 22351475 22351508 jockey 6 1784 0.0 2.5 1.2 2.7 1817 chr2R 22349691 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351508 intron Liprin-gamma - chr2R_6_22350001 chr2R_22350001 RAL-301_75b 870 chr2R 22360381 22360397 chr2R 22360814 22360830 jockey 7 433 5.0 3.0 4.0 1.4 449 chr2R 22360381 intron Liprin-gamma - chr2R 22360606 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_7_22360001 chr2R_22360001 RAL-301_75b 871 chr2R 22362664 22362680 chr2R 22362742 22362759 6 79 2.5 4.0 3.2 1.4 95 chr2R 22362664 intron Liprin-gamma - chr2R 22362712 intron Liprin-gamma - chr2R 22362759 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-301_75b 872 chr2R 22411489 22411529 chr2R 22411567 22411607 15 77 4.5 2.0 3.2 3.6 118 chr2R 22411489 5` UTR qkr58E-3 - chr2R 22411548 intergenic qkr58E-3 -,Mes4 + chr2R 22411607 intergenic qkr58E-3 -,Mes4 + chr2R_15_22410001 chr2R_22410001 RAL-301_75b 873 chr2R 22506717 22506731 chr2R 22506795 22506809 5 78 1.0 1.5 1.2 2.3 92 chr2R 22506717 intron px - chr2R 22506763 intron px - chr2R 22506809 intron px - chr2R_5_22505001 chr2R_22505001 RAL-301_75b 874 chr2R 22523065 22523078 chr2R 22523141 22523154 12 76 1.5 3.0 2.2 3.8 89 chr2R 22523065 intron px - chr2R 22523110 intron px - chr2R 22523154 intron px - chr2R_12_22520001 chr2R_22520001 RAL-301_75b 875 chr2R 22525749 22525781 chr2R 22529304 22529336 jockey 8 3555 3.0 0.0 1.5 3.2 3587 chr2R 22525749 intron px - chr2R 22527542 intron px - chr2R 22529336 intron px - chr2R_8_22525001 chr2R_22525001 RAL-301_75b 876 chr2R 22575660 22575694 chr2R 22575739 22575773 16 79 2.0 2.5 2.2 5.0 113 chr2R 22575660 intron dnr1 - chr2R 22575716 intron dnr1 - chr2R 22575773 intron dnr1 - chr2R_16_22575001 chr2R_22575001 RAL-301_75b 877 chr2R 22774961 22774998 chr2R 22775380 22775417 jockey 18 419 0.5 5.0 2.8 4.7 456 chr2R 22774961 intron CG42260 - chr2R 22775189 intron CG42260 - chr2R 22775417 intron CG42260 - chr2R_18_22775001 chr2R_22775001 RAL-301_75b 878 chr2R 22941826 22941850 chr2R 22941905 22941929 11 79 0.0 6.5 3.2 2.6 103 chr2R 22941826 intergenic CG42694 + chr2R 22941878 5` UTR CG42694 + chr2R 22941929 5` UTR CG42694 + chr2R_11_22940001 chr2R_22940001 RAL-301_75b 879 chr2R 22951715 22951855 chr2R 22951855 22951941 6 131 0.0 0.0 0.0 6.0 226 chr2R 22951715 3` UTR CR32835 - chr2R 22951828 3` UTR CR32835 - chr2R 22951941 intron CR32835 - chr2R_6_22950001 chr2R_22950001 RAL-301_75b 880 chr2R 22968142 22968169 chr2R 22968231 22968257 11 89 3.5 5.0 4.2 2.1 115 chr2R 22968142 intergenic not near genes chr2R 22968200 intergenic not near genes chr2R 22968257 intergenic not near genes chr2R_11_22965001 chr2R_22965001 RAL-301_75b 881 chr2R 23045334 23045361 chr2R 23045548 23045575 10 214 3.5 5.5 4.5 1.8 241 chr2R 23045334 intron twi + chr2R 23045454 intron twi + chr2R 23045575 intron twi + chr2R_10_23045001 chr2R_23045001 RAL-301_75b 882 chr2R 23122829 23122857 chr2R 23123251 23123281 6 424 1.5 3.0 2.2 1.9 452 chr2R 23122829 intergenic not near genes chr2R 23123055 intergenic not near genes chr2R 23123281 intergenic not near genes chr2R_6_23120001 chr2R_23120001 RAL-301_75b 883 chr2R 23133450 23133454 chr2R 23133529 23133533 5 78 0.0 0.0 0.0 5.0 83 chr2R 23133450 intergenic not near genes chr2R 23133492 intergenic not near genes chr2R 23133533 intergenic not near genes chr2R_5_23130001 chr2R_23130001 RAL-301_75b 884 chr2R 23138451 23138480 chr2R 23138536 23138562 8 84 1.5 3.5 2.5 2.3 111 chr2R 23138451 intergenic CG30192 + chr2R 23138506 intergenic CG30192 + chr2R 23138562 intergenic CG30192 + chr2R_8_23135001 chr2R_23135001 RAL-301_75b 885 chr2R 23186574 23186593 chr2R 23186652 23186671 7 78 3.0 4.0 3.5 1.6 97 chr2R 23186574 intron CG34371 - chr2R 23186622 intron CG34371 - chr2R 23186671 intron CG34371 - chr2R_7_23185001 chr2R_23185001 RAL-301_75b 886 chr2R 23188554 23188589 chr2R 23188632 23188666 12 78 0.0 2.5 1.2 5.5 112 chr2R 23188554 intron CG34371 - chr2R 23188610 intron CG34371 - chr2R 23188666 intron CG34371 - chr2R_12_23185001 chr2R_23185001 RAL-301_75b 887 chr2R 23225977 23225979 chr2R 23226081 23226082 4 104 4.0 3.0 3.5 0.9 105 chr2R 23225977 intergenic not near genes chr2R 23226030 intergenic not near genes chr2R 23226082 intergenic not near genes chr2R_4_23225001 chr2R_23225001 RAL-301_75b 888 chr2R 23275659 23275684 chr2R 23275749 23275774 14 91 0.0 2.0 1.0 7.0 115 chr2R 23275659 intergenic ord - chr2R 23275716 intergenic ord - chr2R 23275774 intergenic ord - chr2R_14_23275001 chr2R_23275001 RAL-301_75b 889 chr2R 23339511 23339528 chr2R 23339589 23339608 9 80 3.0 1.5 2.2 2.8 97 chr2R 23339511 intergenic not near genes chr2R 23339560 intergenic not near genes chr2R 23339608 intergenic not near genes chr2R_9_23335001 chr2R_23335001 RAL-301_75b 890 chr2R 23423740 23423771 chr2R 23423897 23423928 11 158 2.0 5.5 3.8 2.3 188 chr2R 23423740 intron CG9815 - chr2R 23423834 intron CG9815 - chr2R 23423928 intron CG9815 - chr2R_11_23420001 chr2R_23420001 RAL-301_75b 891 chr2R 23429216 23429240 chr2R 23429436 23429465 4 224 2.0 0.0 1.0 2.0 249 chr2R 23429216 intron CG9815 - chr2R 23429340 intron CG9815 - chr2R 23429465 intron CG9815 - chr2R_4_23425001 chr2R_23425001 RAL-301_75b 892 chr2R 23437229 23437246 chr2R 23437306 23437323 6 77 1.5 2.5 2.0 2.0 94 chr2R 23437229 intergenic not near genes chr2R 23437276 intergenic not near genes chr2R 23437323 intergenic not near genes chr2R_6_23435001 chr2R_23435001 RAL-301_75b 893 chr2R 23461131 23461140 chr2R 23461224 23461232 7 92 3.5 5.0 4.2 1.3 101 chr2R 23461131 intron CG43795 + chr2R 23461182 intron CG43795 + chr2R 23461232 intron CG43795 + chr2R_7_23460001 chr2R_23460001 RAL-301_75b 894 chr2R 23493012 23493037 chr2R 23493094 23493117 10 81 1.5 2.0 1.8 3.6 105 chr2R 23493012 intergenic not near genes chr2R 23493064 intergenic not near genes chr2R 23493117 intergenic not near genes chr2R_10_23490001 chr2R_23490001 RAL-301_75b 895 chr2R 23508934 23508945 chr2R 23509051 23509062 8 117 2.0 4.0 3.0 2.0 128 chr2R 23508934 intergenic not near genes chr2R 23508998 intergenic not near genes chr2R 23509062 intergenic not near genes chr2R_8_23505001 chr2R_23505001 RAL-301_75b 896 chr2R 23607036 23607191 chr2R 23607117 23607284 19 84 4.5 2.5 3.5 4.2 248 chr2R 23607036 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607284 intron CG17664 - chr2R_19_23605001 chr2R_23605001 RAL-301_75b 897 chr2R 23635699 23635729 chr2R 23635775 23635805 11 76 0.0 0.5 0.2 9.2 106 chr2R 23635699 intron retn + chr2R 23635752 intron retn + chr2R 23635805 intron retn + chr2R_11_23635001 chr2R_23635001 RAL-301_75b 898 chr2R 23705624 23705650 chr2R 23710904 23710928 4 5278 21.0 14.5 17.8 0.2 5304 chr2R 23705624 exon l(2)not - chr2R 23708276 intron,exon l(2)not -,l(2)tid + chr2R 23710928 intergenic not near genes chr2R_4_23705001 chr2R_23705001 RAL-301_75b 899 chr2R 23718290 23718319 chr2R 23718434 23718460 7 142 18.0 27.0 22.5 0.3 170 chr2R 23718290 intron Sesn + chr2R 23718375 intron Sesn + chr2R 23718460 intron Sesn + chr2R_7_23715001 chr2R_23715001 RAL-301_75b 900 chr2R 23821938 23821949 chr2R 23822019 23822029 6 80 0.0 6.0 3.0 1.5 91 chr2R 23821938 intron CG5549 + chr2R 23821984 intron CG5549 + chr2R 23822029 intron CG5549 + chr2R_6_23820001 chr2R_23820001 RAL-301_75b 901 chr2R 23914297 23914327 chr2R 23921921 23921951 412 4 7623 5.5 2.0 3.8 0.8 7654 chr2R 23914297 exon kcc + chr2R 23918124 intron kcc + chr2R 23921951 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-301_75b 902 chr2R 24025711 24025742 chr2R 24025812 24025844 14 102 2.5 1.5 2.0 4.7 133 chr2R 24025711 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025778 3` UTR Adk2 + chr2R 24025844 3` UTR Adk2 + chr2R_14_24025001 chr2R_24025001 RAL-301_75b 903 chr2R 24031389 24031401 chr2R 24031473 24031485 8 84 6.5 5.5 6.0 1.1 96 chr2R 24031389 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031485 intergenic Chi -,CG30172 - chr2R_8_24030001 chr2R_24030001 RAL-301_75b 904 chr2R 24177237 24177268 chr2R 24184722 24184753 412 13 7485 5.5 5.0 5.2 2.1 7516 chr2R 24177237 3` UTR Nop60B + chr2R 24180995 intron Nop60B + chr2R 24184753 3` UTR Nop60B + chr2R_13_24180001 chr2R_24180001 RAL-301_75b 905 chr2R 24323616 24323652 chr2R 24323707 24323745 15 92 2.0 1.5 1.8 5.4 129 chr2R 24323616 intergenic not near genes chr2R 24323680 intergenic not near genes chr2R 24323745 intergenic not near genes chr2R_15_24320001 chr2R_24320001 RAL-301_75b 906 chr2R 24353431 24353458 chr2R 24361791 24361820 roo 11 8361 3.0 7.0 5.0 1.8 8389 chr2R 24353431 intron,intron bs +,CR44811 - chr2R 24357626 intron,intron bs +,CR44811 - chr2R 24361820 intron,intron bs +,CR44811 - chr2R_11_24355001 chr2R_24355001 RAL-301_75b 907 chr2R 24383825 24383857 chr2R 24383906 24383938 8 81 2.5 4.0 3.2 1.9 113 chr2R 24383825 intron mAChR-A - chr2R 24383882 intron mAChR-A - chr2R 24383938 exon mAChR-A - chr2R_8_24380001 chr2R_24380001 RAL-301_75b 908 chr2R 24415313 24415348 chr2R 24415398 24415433 12 85 1.0 1.0 1.0 6.0 120 chr2R 24415313 intergenic CG45068 +,CG45069 +,prom - chr2R 24415373 intergenic prom -,CG45068 +,CG45069 + chr2R 24415433 3` UTR prom - chr2R_12_24415001 chr2R_24415001 RAL-301_75b 909 chr2R 24630564 24630582 chr2R 24630761 24630781 7 198 2.0 5.0 3.5 1.6 217 chr2R 24630564 intron CG13594 - chr2R 24630672 intron CG13594 - chr2R 24630781 intron CG13594 - chr2R_7_24630001 chr2R_24630001 RAL-301_75b 910 chr2R 24644733 24644737 chr2R 24644951 24644955 5 218 7.5 6.0 6.8 0.6 222 chr2R 24644733 intergenic not near genes chr2R 24644844 intergenic not near genes chr2R 24644955 intergenic not near genes chr2R_5_24640001 chr2R_24640001 RAL-301_75b 911 chr2R 24666015 24666043 chr2R 24666108 24666136 8 93 3.5 4.0 3.8 1.7 121 chr2R 24666015 5` UTR CG34214 - chr2R 24666076 intergenic CG34214 -,CG4806 - chr2R 24666136 intergenic CG4806 -,CG34214 - chr2R_8_24665001 chr2R_24665001 RAL-301_75b 912 chr2R 24722375 24722396 chr2R 24722457 24722478 15 82 0.5 6.5 3.5 3.3 103 chr2R 24722375 intron Mid1 - chr2R 24722426 intron Mid1 - chr2R 24722478 intron Mid1 - chr2R_15_24720001 chr2R_24720001 RAL-301_75b 913 chr2R 24727887 24727917 chr2R 24735395 24735425 mdg1 8 7507 0.5 5.0 2.8 2.1 7538 chr2R 24727887 intron Mid1 - chr2R 24731656 intron Mid1 - chr2R 24735425 intron Mid1 - chr2R_8_24730001 chr2R_24730001 RAL-301_75b 914 chr2R 24737150 24737169 chr2R 24737269 24737288 5 119 3.5 2.5 3.0 1.2 138 chr2R 24737150 intergenic Mid1 - chr2R 24737219 intergenic not near genes chr2R 24737288 intergenic not near genes chr2R_5_24735001 chr2R_24735001 RAL-301_75b 915 chr2R 24763612 24763641 chr2R 24765588 24765617 G2 10 1976 1.0 0.5 0.8 5.6 2005 chr2R 24763612 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765617 exon CG3894 + chr2R_10_24760001 chr2R_24760001 RAL-301_75b 916 chr2R 24859839 24859869 chr2R 24859925 24859955 8 86 2.5 1.5 2.0 2.7 116 chr2R 24859839 5` UTR CR44829 + chr2R 24859897 5` UTR CR44829 + chr2R 24859955 5` UTR CR44829 + chr2R_8_24855001 chr2R_24855001 RAL-301_75b 917 chr2R 24876325 24876337 chr2R 24876662 24876673 4 336 14.5 16.5 15.5 0.2 348 chr2R 24876325 intergenic CG44247 +,CG30423 - chr2R 24876499 intergenic CG44247 + chr2R 24876673 intergenic CG44247 + chr2R_4_24875001 chr2R_24875001 RAL-301_75b 918 chr2R 24884051 24884078 chr2R 24884133 24884160 17 82 3.0 1.5 2.2 5.3 109 chr2R 24884051 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884160 intron NKAIN + chr2R_17_24880001 chr2R_24880001 RAL-301_75b 919 chr2R 25004892 25004917 chr2R 25004970 25004995 14 78 4.5 8.5 6.5 1.9 103 chr2R 25004892 intron zip - chr2R 25004944 intron zip - chr2R 25004995 intron zip - chr2R_14_25000001 chr2R_25000001 RAL-301_75b 920 chr2R 25014548 25014574 chr2R 25014624 25014649 9 75 0.0 2.0 1.0 4.5 101 chr2R 25014548 intron uzip + chr2R 25014598 intron uzip + chr2R 25014649 intron uzip + chr2R_9_25010001 chr2R_25010001 RAL-301_75b 921 chr2R 25018350 25018376 chr2R 25018451 25018477 9 101 3.0 7.5 5.2 1.5 127 chr2R 25018350 intron uzip + chr2R 25018414 intron uzip + chr2R 25018477 intron uzip + chr2R_9_25015001 chr2R_25015001 RAL-301_75b 922 chr2R 25022639 25022673 chr2R 25022723 25022757 11 84 4.0 3.0 3.5 2.4 118 chr2R 25022639 intron uzip + chr2R 25022698 intron uzip + chr2R 25022757 intron uzip + chr2R_11_25020001 chr2R_25020001 RAL-301_75b 923 chr2R 25061994 25062008 chr2R 25062073 25062087 5 79 5.0 2.5 3.8 1.0 93 chr2R 25061994 5` UTR gsb + chr2R 25062040 5` UTR gsb + chr2R 25062087 5` UTR gsb + chr2R_5_25060001 chr2R_25060001 RAL-301_75b 924 chr2R 25080306 25080331 chr2R 25080676 25080701 8 370 5.0 1.5 3.2 1.9 395 chr2R 25080306 intron gol - chr2R 25080504 intron gol - chr2R 25080701 intron gol - chr2R_8_25080001 chr2R_25080001 RAL-301_75b 925 chr2R 25081627 25081631 chr2R 25082723 25082727 7 1096 3.5 8.0 5.8 1.0 1100 chr2R 25081627 intron gol - chr2R 25082177 intron gol - chr2R 25082727 intron gol - chr2R_7_25080001 chr2R_25080001 RAL-301_75b 926 chr2R 25101282 25101306 chr2R 25101383 25101408 12 102 4.5 1.0 2.8 3.2 126 chr2R 25101282 intron lov - chr2R 25101345 intron lov - chr2R 25101408 intron lov - chr2R_12_25100001 chr2R_25100001 RAL-301_75b 927 chr2R 25122965 25122989 chr2R 25123044 25123068 13 79 0.5 0.5 0.5 8.7 103 chr2R 25122965 intron lov - chr2R 25123016 intron lov - chr2R 25123068 intron lov - chr2R_13_25120001 chr2R_25120001 RAL-301_75b 928 chr2R 25141648 25141684 chr2R 25159338 25159374 roo 9 17689 2.5 5.0 3.8 1.9 17726 chr2R 25141648 intergenic not near genes chr2R 25150511 intergenic not near genes chr2R 25159374 intergenic not near genes chr2R_9_25150001 chr2R_25150001 RAL-301_75b 929 chr2R 25176903 25176926 chr2R 25177169 25177193 13 267 10.0 4.5 7.2 1.6 290 chr2R 25176903 intergenic Peb - chr2R 25177048 intergenic Peb - chr2R 25177193 intergenic Peb - chr2R_13_25175001 chr2R_25175001 RAL-301_75b 930 chr2R 25180764 25180785 chr2R 25180841 25180862 5 77 5.0 0.5 2.8 1.3 98 chr2R 25180764 intergenic not near genes chr2R 25180813 intergenic not near genes chr2R 25180862 intergenic not near genes chr2R_5_25180001 chr2R_25180001 RAL-301_75b 931 chr2R 25181104 25181137 chr2R 25181200 25181234 10 97 2.5 7.0 4.8 1.7 130 chr2R 25181104 intergenic not near genes chr2R 25181169 intergenic not near genes chr2R 25181234 intergenic not near genes chr2R_10_25180001 chr2R_25180001 RAL-301_75b 932 chr2R 24116801 24116840 chr2R 25183947 25184086 412 4 1067196 15.5 10.0 12.8 0.3 1067285 chr2R 24116801 5` UTR CG3257 + chr2R 24650444 intergenic not near genes chr2R 25184086 intergenic not near genes chr2R_4_24650001 chr2R_24650001 RAL-301_75b 933 chr2R 25193345 25193352 chr2R 25193487 25193494 6 142 1.0 0.0 0.5 4.0 149 chr2R 25193345 intron CG9380 - chr2R 25193420 intron CG9380 - chr2R 25193494 intron CG9380 - chr2R_6_25190001 chr2R_25190001 RAL-301_75b 934 chr2R 25236029 25236039 chr2R 25236140 25236150 4 111 2.5 8.0 5.2 0.6 121 chr2R 25236029 intron CG9380 - chr2R 25236090 intron CG9380 - chr2R 25236150 intron CG9380 - chr2R_4_25235001 chr2R_25235001 RAL-301_75b 935 chr2R 25253454 25253474 chr2R 25253528 25253550 6 76 3.5 2.5 3.0 1.5 96 chr2R 25253454 intron,intron CG9380 -,CG30428 + chr2R 25253502 intron,intron CG9380 -,CG30428 + chr2R 25253550 intron,intron CG9380 -,CG30428 + chr2R_6_25250001 chr2R_25250001 RAL-301_75b 936 chr3L 52911 52939 chr3L 52995 53023 5 84 0.0 6.0 3.0 1.2 112 chr3L 52911 intergenic not near genes chr3L 52967 intergenic not near genes chr3L 53023 intergenic not near genes chr3L_5_50001 chr3L_50001 RAL-301_75b 937 chr3L 88743 88780 chr3L 90663 90699 14 1919 1.5 2.0 1.8 5.0 1956 chr3L 88743 intergenic not near genes chr3L 89721 intergenic not near genes chr3L 90699 intergenic not near genes chr3L_14_85001 chr3L_85001 RAL-301_75b 938 chr3L 110209 110233 chr3L 119376 119400 roo 8 9167 4.0 0.0 2.0 2.7 9191 chr3L 110209 intergenic not near genes chr3L 114804 intergenic not near genes chr3L 119400 intergenic not near genes chr3L_8_110001 chr3L_110001 RAL-301_75b 939 chr3L 402699 402714 chr3L 409752 409767 297 5 7052 4.5 14.0 9.2 0.5 7068 chr3L 402699 intergenic not near genes chr3L 406233 intergenic not near genes chr3L 409767 intergenic not near genes chr3L_5_405001 chr3L_405001 RAL-301_75b 940 chr3L 421059 421085 chr3L 421154 421181 7 96 3.5 5.5 4.5 1.3 122 chr3L 421059 intergenic not near genes chr3L 421120 intergenic not near genes chr3L 421181 intergenic not near genes chr3L_7_420001 chr3L_420001 RAL-301_75b 941 chr3L 428191 428206 chr3L 428312 428327 6 121 4.5 0.0 2.2 1.9 136 chr3L 428191 intergenic not near genes chr3L 428259 intergenic not near genes chr3L 428327 intergenic not near genes chr3L_6_425001 chr3L_425001 RAL-301_75b 942 chr3L 561485 561510 chr3L 561560 561587 5 76 4.5 0.0 2.2 1.6 102 chr3L 561485 intron hipk + chr3L 561536 intron hipk + chr3L 561587 intron hipk + chr3L_5_560001 chr3L_560001 RAL-301_75b 943 chr3L 564488 564515 chr3L 564580 564607 14 92 5.0 4.5 4.8 2.4 119 chr3L 564488 intron hipk + chr3L 564548 intron hipk + chr3L 564607 intron hipk + chr3L_14_560001 chr3L_560001 RAL-301_75b 944 chr3L 566805 566826 chr3L 567158 567179 8 353 5.5 6.0 5.8 1.2 374 chr3L 566805 intron hipk + chr3L 566992 intron hipk + chr3L 567179 intron hipk + chr3L_8_565001 chr3L_565001 RAL-301_75b 945 chr3L 586574 586599 chr3L 587553 587578 7 979 9.0 3.5 6.2 1.0 1004 chr3L 586574 intron Kah - chr3L 587076 intron Kah - chr3L 587578 intron Kah - chr3L_7_585001 chr3L_585001 RAL-301_75b 946 chr3L 642471 642480 chr3L 642562 642571 6 90 9.0 3.0 6.0 0.9 100 chr3L 642471 5` UTR CR43334 + chr3L 642521 5` UTR CR43334 + chr3L 642571 5` UTR CR43334 + chr3L_6_640001 chr3L_640001 RAL-301_75b 947 chr3L 651397 651415 chr3L 651485 651502 7 88 5.0 8.5 6.8 0.9 105 chr3L 651397 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651502 intergenic CG3402 -,Gale + chr3L_7_650001 chr3L_650001 RAL-301_75b 948 chr3L 705900 705918 chr3L 705996 706014 5 96 6.5 5.0 5.8 0.7 114 chr3L 705900 intergenic CG13895 -,CR44514 + chr3L 705957 3` UTR CG13895 - chr3L 706014 3` UTR CG13895 - chr3L_5_705001 chr3L_705001 RAL-301_75b 949 chr3L 822086 822093 chr3L 822166 822173 4 79 0.0 3.5 1.8 1.4 87 chr3L 822086 intergenic not near genes chr3L 822130 intergenic not near genes chr3L 822173 intergenic not near genes chr3L_4_820001 chr3L_820001 RAL-301_75b 950 chr3L 922173 922185 chr3L 922250 922261 7 77 3.5 0.0 1.8 2.5 88 chr3L 922173 intron Glut1 + chr3L 922217 intron Glut1 + chr3L 922261 intron Glut1 + chr3L_7_920001 chr3L_920001 RAL-301_75b 951 chr3L 933916 933944 chr3L 934019 934047 15 103 5.5 4.0 4.8 2.6 131 chr3L 933916 intron Glut1 + chr3L 933982 intron Glut1 + chr3L 934047 intron Glut1 + chr3L_15_930001 chr3L_930001 RAL-301_75b 952 chr3L 939777 939801 chr3L 940898 940921 jockey 10 1120 5.5 9.0 7.2 1.2 1144 chr3L 939777 intron Glut1 + chr3L 940349 intron Glut1 + chr3L 940921 intron Glut1 + chr3L_10_940001 chr3L_940001 RAL-301_75b 953 chr3L 1003055 1003081 chr3L 1003132 1003157 9 77 2.0 7.5 4.8 1.6 102 chr3L 1003055 intron trio - chr3L 1003106 intron trio - chr3L 1003157 intron trio - chr3L_9_1000001 chr3L_1000001 RAL-301_75b 954 chr3L 1015030 1015050 chr3L 1015138 1015162 4 110 5.0 0.0 2.5 1.1 132 chr3L 1015030 intron trio - chr3L 1015096 intron trio - chr3L 1015162 intron trio - chr3L_4_1015001 chr3L_1015001 RAL-301_75b 955 chr3L 1021374 1021405 chr3L 1021454 1021483 23 80 5.5 5.5 5.5 3.5 109 chr3L 1021374 intron trio - chr3L 1021428 intron trio - chr3L 1021483 intron trio - chr3L_23_1020001 chr3L_1020001 RAL-301_75b 956 chr3L 1047350 1047370 chr3L 1055162 1055180 412 5 7811 3.5 1.0 2.2 1.6 7830 chr3L 1047350 intron bab1 - chr3L 1051265 intron bab1 - chr3L 1055180 intron bab1 - chr3L_5_1050001 chr3L_1050001 RAL-301_75b 957 chr3L 1063336 1063370 chr3L 1063712 1063746 16 376 1.0 1.0 1.0 8.0 410 chr3L 1063336 intron bab1 - chr3L 1063541 intron bab1 - chr3L 1063746 intron bab1 - chr3L_16_1060001 chr3L_1060001 RAL-301_75b 958 chr3L 1154130 1154163 chr3L 1163280 1163313 roo 14 9150 0.5 1.0 0.8 7.8 9183 chr3L 1154130 intron bab2 - chr3L 1158722 intron bab2 - chr3L 1163313 intron bab2 - chr3L_14_1155001 chr3L_1155001 RAL-301_75b 959 chr3L 1219597 1219623 chr3L 1227328 1227356 412 7 7733 3.0 3.5 3.2 1.7 7759 chr3L 1219597 intron mwh + chr3L 1223476 intron mwh + chr3L 1227356 intron mwh + chr3L_7_1220001 chr3L_1220001 RAL-301_75b 960 chr3L 1260154 1260162 chr3L 1260234 1260242 5 80 0.0 2.5 1.2 2.3 88 chr3L 1260154 intron CG9134 + chr3L 1260198 intron CG9134 + chr3L 1260242 intron CG9134 + chr3L_5_1260001 chr3L_1260001 RAL-301_75b 961 chr3L 1323835 1323865 chr3L 1323925 1323955 9 90 2.0 0.0 1.0 4.5 120 chr3L 1323835 intron,intron Myo61F +,CR45166 - chr3L 1323895 intron,intron Myo61F +,CR45166 - chr3L 1323955 intron,3` UTR Myo61F +,CR45166 - chr3L_9_1320001 chr3L_1320001 RAL-301_75b 962 chr3L 1396741 1396752 chr3L 1396825 1396836 8 84 2.5 1.0 1.8 2.9 95 chr3L 1396741 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396836 intron Ptp61F - chr3L_8_1395001 chr3L_1395001 RAL-301_75b 963 chr3L 1415776 1415807 chr3L 1415857 1415889 8 82 1.0 5.0 3.0 2.0 113 chr3L 1415776 intron Ptp61F - chr3L 1415832 intron Ptp61F - chr3L 1415889 intron Ptp61F - chr3L_8_1415001 chr3L_1415001 RAL-301_75b 964 chr3L 1441385 1441417 chr3L 1441463 1441495 15 77 3.0 3.0 3.0 3.8 110 chr3L 1441385 intron Ptp61F - chr3L 1441440 intron Ptp61F - chr3L 1441495 intron Ptp61F - chr3L_15_1440001 chr3L_1440001 RAL-301_75b 965 chr3L 1501995 1502014 chr3L 1502076 1502095 5 81 1.0 3.0 2.0 1.7 100 chr3L 1501995 intron pUf68 - chr3L 1502045 intron pUf68 - chr3L 1502095 intron pUf68 - chr3L_5_1500001 chr3L_1500001 RAL-301_75b 966 chr3L 1506000 1506032 chr3L 1513594 1513627 17.6 13 7596 1.5 2.0 1.8 4.6 7627 chr3L 1506000 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513627 intron,intron Psa +,cue - chr3L_13_1505001 chr3L_1505001 RAL-301_75b 967 chr3L 1740867 1740882 chr3L 1741109 1741127 pogo 6 243 5.0 5.0 5.0 1.0 260 chr3L 1740867 intron Gk + chr3L 1740997 intron Gk + chr3L 1741127 intron Gk + chr3L_6_1740001 chr3L_1740001 RAL-301_75b 968 chr3L 1823858 1823875 chr3L 1824127 1824144 10 268 3.5 4.5 4.0 2.0 286 chr3L 1823858 intergenic Cpr62Ba - chr3L 1824001 intergenic Cpr62Ba - chr3L 1824144 3` UTR Cpr62Ba - chr3L_10_1820001 chr3L_1820001 RAL-301_75b 969 chr3L 1853050 1853054 chr3L 1853133 1853138 6 84 4.5 2.0 3.2 1.4 88 chr3L 1853050 intron CG13936 - chr3L 1853094 intron CG13936 - chr3L 1853138 intron CG13936 - chr3L_6_1850001 chr3L_1850001 RAL-301_75b 970 chr3L 1905352 1905354 chr3L 1905446 1905448 4 94 5.5 4.0 4.8 0.7 96 chr3L 1905352 intron CG1887 - chr3L 1905400 intron CG1887 - chr3L 1905448 intron CG1887 - chr3L_4_1905001 chr3L_1905001 RAL-301_75b 971 chr3L 1922456 1922467 chr3L 1922534 1922545 7 78 4.0 3.5 3.8 1.5 89 chr3L 1922456 intron Dbx + chr3L 1922500 intron Dbx + chr3L 1922545 intron Dbx + chr3L_7_1920001 chr3L_1920001 RAL-301_75b 972 chr3L 1988118 1988398 chr3L 1988258 1988485 7 125 4.0 6.5 5.2 1.1 367 chr3L 1988118 intergenic not near genes chr3L 1988302 intergenic not near genes chr3L 1988485 intergenic not near genes chr3L_7_1985001 chr3L_1985001 RAL-301_75b 973 chr3L 2107120 2107141 chr3L 2107215 2107239 4 97 0.0 0.5 0.2 3.3 119 chr3L 2107120 intron sls - chr3L 2107180 intron sls - chr3L 2107239 intron sls - chr3L_4_2105001 chr3L_2105001 RAL-301_75b 974 chr3L 2108248 2108284 chr3L 2113452 2113487 copia 8 5204 2.5 3.0 2.8 2.1 5239 chr3L 2108248 intron sls - chr3L 2110868 intron sls - chr3L 2113487 intron sls - chr3L_8_2110001 chr3L_2110001 RAL-301_75b 975 chr3L 2139206 2139221 chr3L 2139287 2139302 5 80 3.0 1.0 2.0 1.7 96 chr3L 2139206 intron zormin - chr3L 2139254 intron zormin - chr3L 2139302 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-301_75b 976 chr3L 2199815 2199821 chr3L 2199890 2199897 5 76 0.0 2.0 1.0 2.5 82 chr3L 2199815 intergenic not near genes chr3L 2199856 intergenic not near genes chr3L 2199897 intergenic not near genes chr3L_5_2195001 chr3L_2195001 RAL-301_75b 977 chr3L 2302441 2302455 chr3L 2302909 2302923 6 468 3.5 5.5 4.5 1.1 482 chr3L 2302441 intergenic not near genes chr3L 2302682 intergenic not near genes chr3L 2302923 intergenic not near genes chr3L_6_2300001 chr3L_2300001 RAL-301_75b 978 chr3L 2308002 2308036 chr3L 2308108 2308142 5 106 2.0 4.0 3.0 1.2 140 chr3L 2308002 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308142 intergenic not near genes chr3L_5_2305001 chr3L_2305001 RAL-301_75b 979 chr3L 2320384 2320413 chr3L 2320468 2320498 12 85 1.5 3.0 2.2 3.8 114 chr3L 2320384 intergenic CR45426 - chr3L 2320441 intergenic not near genes chr3L 2320498 intergenic not near genes chr3L_12_2320001 chr3L_2320001 RAL-301_75b 980 chr3L 2382709 2382735 chr3L 2382791 2382817 6 82 1.5 3.5 2.5 1.7 108 chr3L 2382709 intergenic not near genes chr3L 2382763 intergenic not near genes chr3L 2382817 intergenic not near genes chr3L_6_2380001 chr3L_2380001 RAL-301_75b 981 chr3L 2447504 2447536 chr3L 2456660 2456689 roo 12 9155 4.5 2.0 3.2 2.9 9185 chr3L 2447504 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456689 intron CG45186 + chr3L_12_2450001 chr3L_2450001 RAL-301_75b 982 chr3L 2460652 2460679 chr3L 2460787 2460815 6 136 3.5 1.0 2.2 1.9 163 chr3L 2460652 intron CG45186 + chr3L 2460734 intron CG45186 + chr3L 2460815 intron CG45186 + chr3L_6_2460001 chr3L_2460001 RAL-301_75b 983 chr3L 2515409 2515430 chr3L 2515491 2515511 6 82 4.5 6.5 5.5 0.9 102 chr3L 2515409 intron Spn - chr3L 2515460 intron Spn - chr3L 2515511 intron Spn - chr3L_6_2515001 chr3L_2515001 RAL-301_75b 984 chr3L 2533653 2533671 chr3L 2533735 2533752 5 82 5.0 5.5 5.2 0.8 99 chr3L 2533653 intron Spn - chr3L 2533702 intron Spn - chr3L 2533752 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-301_75b 985 chr3L 2561527 2561560 chr3L 2561603 2561637 8 76 3.0 2.0 2.5 2.3 110 chr3L 2561527 intron msn - chr3L 2561582 intron msn - chr3L 2561637 intron msn - chr3L_8_2560001 chr3L_2560001 RAL-301_75b 986 chr3L 2581897 2581908 chr3L 2581991 2582002 4 94 1.5 0.0 0.8 2.2 105 chr3L 2581897 intron msn - chr3L 2581950 intron msn - chr3L 2582002 intron msn - chr3L_4_2580001 chr3L_2580001 RAL-301_75b 987 chr3L 2591711 2591744 chr3L 2591798 2591831 14 86 5.0 1.5 3.2 3.3 120 chr3L 2591711 intron dos + chr3L 2591771 intron dos + chr3L 2591831 intron dos + chr3L_14_2590001 chr3L_2590001 RAL-301_75b 988 chr3L 2619263 2619285 chr3L 2619622 2619644 7 359 3.0 1.0 2.0 2.3 381 chr3L 2619263 intron Pxn - chr3L 2619454 intron Pxn - chr3L 2619644 intron Pxn - chr3L_7_2615001 chr3L_2615001 RAL-301_75b 989 chr3L 2680517 2680546 chr3L 2680597 2680626 15 79 1.0 0.0 0.5 10.0 109 chr3L 2680517 intron Fife - chr3L 2680572 intron Fife - chr3L 2680626 intron Fife - chr3L_15_2680001 chr3L_2680001 RAL-301_75b 990 chr3L 2683943 2683976 chr3L 2684019 2684051 10 76 5.5 1.0 3.2 2.4 108 chr3L 2683943 intron Fife - chr3L 2683997 intron Fife - chr3L 2684051 intron Fife - chr3L_10_2680001 chr3L_2680001 RAL-301_75b 991 chr3L 2719538 2719554 chr3L 2719639 2719656 6 102 4.5 2.0 3.2 1.4 118 chr3L 2719538 3` UTR Mrtf - chr3L 2719597 3` UTR Mrtf - chr3L 2719656 3` UTR Mrtf - chr3L_6_2715001 chr3L_2715001 RAL-301_75b 992 chr3L 2766736 2766763 chr3L 2766833 2766858 8 97 1.5 6.0 3.8 1.7 122 chr3L 2766736 intergenic Mrtf -,Non2 + chr3L 2766797 intergenic Non2 +,Mrtf - chr3L 2766858 intergenic Non2 +,Mrtf - chr3L_8_2765001 chr3L_2765001 RAL-301_75b 993 chr3L 2795724 2795746 chr3L 2795847 2795869 4 121 2.0 2.5 2.2 1.2 145 chr3L 2795724 intron CG43444 - chr3L 2795796 intron CG43444 - chr3L 2795869 intron CG43444 - chr3L_4_2795001 chr3L_2795001 RAL-301_75b 994 chr3L 2810055 2810085 chr3L 2810165 2810195 16 109 2.5 1.0 1.8 5.7 140 chr3L 2810055 intron CG43444 - chr3L 2810125 intron CG43444 - chr3L 2810195 intron CG43444 - chr3L_16_2810001 chr3L_2810001 RAL-301_75b 995 chr3L 2927841 2927872 chr3L 2936118 2936145 Tirant 6 8276 2.5 1.0 1.8 2.1 8304 chr3L 2927841 intron Shab + chr3L 2931993 intron Shab + chr3L 2936145 intron Shab + chr3L_6_2930001 chr3L_2930001 RAL-301_75b 996 chr3L 2966019 2966031 chr3L 2966101 2966113 6 82 4.0 6.5 5.2 1.0 94 chr3L 2966019 intergenic not near genes chr3L 2966066 intergenic not near genes chr3L 2966113 intergenic not near genes chr3L_6_2965001 chr3L_2965001 RAL-301_75b 997 chr3L 2987737 2987753 chr3L 2987999 2988015 4 262 3.5 3.5 3.5 0.9 278 chr3L 2987737 intergenic not near genes chr3L 2987876 intergenic not near genes chr3L 2988015 intergenic not near genes chr3L_4_2985001 chr3L_2985001 RAL-301_75b 998 chr3L 3040330 3040352 chr3L 3042119 3042139 S-element 5 1788 3.5 1.0 2.2 1.6 1809 chr3L 3040330 3` UTR CG2162 + chr3L 3041234 intergenic not near genes chr3L 3042139 intergenic Jafrac2 + chr3L_5_3040001 chr3L_3040001 RAL-301_75b 999 chr3L 3051746 3051752 chr3L 3051988 3051994 pogo 4 242 5.0 3.5 4.2 0.8 248 chr3L 3051746 3` UTR CG32485 + chr3L 3051870 intergenic CG32485 + chr3L 3051994 intergenic CG32485 + chr3L_4_3050001 chr3L_3050001 RAL-301_75b 1000 chr3L 3061285 3061301 chr3L 3069868 3069882 Tirant 4 8582 6.0 2.5 4.2 0.8 8597 chr3L 3061285 intron CG32486 - chr3L 3065584 intron CG32486 - chr3L 3069882 intron CG32486 - chr3L_4_3065001 chr3L_3065001 RAL-301_75b 1001 chr3L 3104864 3104874 chr3L 3104946 3104956 6 82 4.0 3.0 3.5 1.3 92 chr3L 3104864 intron Cht7 - chr3L 3104910 intron Cht7 - chr3L 3104956 intron Cht7 - chr3L_6_3100001 chr3L_3100001 RAL-301_75b 1002 chr3L 3128191 3128215 chr3L 3128276 3128301 14 86 3.5 1.0 2.2 4.4 110 chr3L 3128191 intergenic prominin-like - chr3L 3128246 intergenic not near genes chr3L 3128301 intergenic not near genes chr3L_14_3125001 chr3L_3125001 RAL-301_75b 1003 chr3L 3269117 3269126 chr3L 3269208 3269214 5 90 0.0 1.5 0.8 2.8 97 chr3L 3269117 intergenic CG34265 + chr3L 3269166 intergenic CG34265 + chr3L 3269214 intergenic CG34265 + chr3L_5_3265001 chr3L_3265001 RAL-301_75b 1004 chr3L 3281449 3281469 chr3L 3281945 3281962 Doc 7 495 5.0 7.5 6.2 1.0 513 chr3L 3281449 intron CG12017 + chr3L 3281706 intron CG12017 + chr3L 3281962 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-301_75b 1005 chr3L 3317542 3317566 chr3L 3317620 3317645 6 79 4.5 3.5 4.0 1.2 103 chr3L 3317542 intergenic Drsl5 +,PIG-C - chr3L 3317594 intergenic PIG-C -,Drsl5 + chr3L 3317645 intergenic PIG-C - chr3L_6_3315001 chr3L_3315001 RAL-301_75b 1006 chr3L 3475077 3475106 chr3L 3475521 3475550 jockey 14 444 2.5 3.5 3.0 3.5 473 chr3L 3475077 intron CG42324 + chr3L 3475314 intron CG42324 + chr3L 3475550 intron CG42324 + chr3L_14_3475001 chr3L_3475001 RAL-301_75b 1007 chr3L 3512962 3512977 chr3L 3513042 3513057 5 79 1.0 3.5 2.2 1.6 95 chr3L 3512962 intergenic ImpE2 - chr3L 3513010 intergenic ImpE2 - chr3L 3513057 intergenic ImpE2 - chr3L_5_3510001 chr3L_3510001 RAL-301_75b 1008 chr3L 3577735 3577767 chr3L 3577813 3577844 10 78 2.0 3.5 2.8 2.6 109 chr3L 3577735 intron Eip63E + chr3L 3577790 intron Eip63E + chr3L 3577844 intron Eip63E + chr3L_10_3575001 chr3L_3575001 RAL-301_75b 1009 chr3L 3581774 3581777 chr3L 3581858 3581860 4 84 0.0 5.5 2.8 1.1 86 chr3L 3581774 intron Eip63E + chr3L 3581817 intron Eip63E + chr3L 3581860 intron Eip63E + chr3L_4_3580001 chr3L_3580001 RAL-301_75b 1010 chr3L 3601299 3601332 chr3L 3606610 3606643 copia 18 5311 3.5 4.0 3.8 3.8 5344 chr3L 3601299 intron Eip63E + chr3L 3603971 intron Eip63E + chr3L 3606643 intron Eip63E + chr3L_18_3600001 chr3L_3600001 RAL-301_75b 1011 chr3L 3623507 3623519 chr3L 3623592 3623604 6 85 2.0 2.5 2.2 1.9 97 chr3L 3623507 intergenic not near genes chr3L 3623556 intergenic not near genes chr3L 3623604 intergenic not near genes chr3L_6_3620001 chr3L_3620001 RAL-301_75b 1012 chr3L 3627236 3627259 chr3L 3627341 3627362 5 105 4.0 3.0 3.5 1.1 126 chr3L 3627236 intron dar1 + chr3L 3627299 intron dar1 + chr3L 3627362 intron dar1 + chr3L_5_3625001 chr3L_3625001 RAL-301_75b 1013 chr3L 3695497 3695512 chr3L 3695575 3695590 6 78 3.0 0.0 1.5 2.4 93 chr3L 3695497 intergenic not near genes chr3L 3695544 intergenic not near genes chr3L 3695590 intergenic not near genes chr3L_6_3695001 chr3L_3695001 RAL-301_75b 1014 chr3L 3763757 3763763 chr3L 3763838 3763844 8 81 3.5 0.0 1.8 2.9 87 chr3L 3763757 intron CG32264 - chr3L 3763800 intron CG32264 - chr3L 3763844 intron CG32264 - chr3L_8_3760001 chr3L_3760001 RAL-301_75b 1015 chr3L 3768971 3768981 chr3L 3769072 3769082 6 100 5.0 3.0 4.0 1.2 111 chr3L 3768971 intron CG32264 - chr3L 3769026 intron CG32264 - chr3L 3769082 exon CG32264 - chr3L_6_3765001 chr3L_3765001 RAL-301_75b 1016 chr3L 3814867 3814870 chr3L 3814953 3814954 4 85 0.0 7.0 3.5 0.9 87 chr3L 3814867 intron,3` UTR Scsalpha +,CR43932 - chr3L 3814910 intron,intron Scsalpha +,CR43932 - chr3L 3814954 intron,3` UTR Scsalpha +,CR43932 - chr3L_4_3810001 chr3L_3810001 RAL-301_75b 1017 chr3L 3921400 3921400 chr3L 3921660 3921664 4 263 16.5 15.0 15.8 0.2 264 chr3L 3921400 intron Eip63F-1 - chr3L 3921532 intron Eip63F-1 - chr3L 3921664 intron Eip63F-1 - chr3L_4_3920001 chr3L_3920001 RAL-301_75b 1018 chr3L 4028794 4028823 chr3L 4028872 4028901 10 78 4.0 2.5 3.2 2.4 107 chr3L 4028794 exon,5` UTR Gr64b +,Gr64c + chr3L 4028848 exon,5` UTR Gr64b +,Gr64c + chr3L 4028901 exon,5` UTR Gr64b +,Gr64c + chr3L_10_4025001 chr3L_4025001 RAL-301_75b 1019 chr3L 4146816 4146840 chr3L 4146898 4146922 7 82 0.0 2.0 1.0 3.5 106 chr3L 4146816 intergenic not near genes chr3L 4146869 intergenic not near genes chr3L 4146922 intergenic not near genes chr3L_7_4145001 chr3L_4145001 RAL-301_75b 1020 chr3L 4195146 4195170 chr3L 4195248 4195274 6 104 4.0 3.5 3.8 1.2 128 chr3L 4195146 exon CG43367 + chr3L 4195210 intron CG43367 + chr3L 4195274 intron CG43367 + chr3L_6_4195001 chr3L_4195001 RAL-301_75b 1021 chr3L 4221672 4221704 chr3L 4222019 4222052 8 348 3.0 3.0 3.0 2.0 380 chr3L 4221672 intron CG43367 + chr3L 4221862 intron,3` UTR CG43367 +,CR32252 - chr3L 4222052 intron,3` UTR CG43367 +,CR32252 - chr3L_8_4220001 chr3L_4220001 RAL-301_75b 1022 chr3L 4328741 4328763 chr3L 4336239 4336261 412 7 7498 1.0 2.0 1.5 2.8 7520 chr3L 4328741 intron Cip4 - chr3L 4332501 intron Cip4 - chr3L 4336261 intron Cip4 - chr3L_7_4330001 chr3L_4330001 RAL-301_75b 1023 chr3L 4364205 4364234 chr3L 4364294 4364323 6 89 0.0 1.0 0.5 4.0 118 chr3L 4364205 intergenic Cip4 -,mRpS6 + chr3L 4364264 intergenic Cip4 -,mRpS6 + chr3L 4364323 intergenic Cip4 -,mRpS6 + chr3L_6_4360001 chr3L_4360001 RAL-301_75b 1024 chr3L 4464866 4464887 chr3L 4464945 4464966 12 79 6.0 6.0 6.0 1.7 100 chr3L 4464866 intergenic CG32241 - chr3L 4464916 intergenic CG32241 - chr3L 4464966 intergenic CG32241 - chr3L_12_4460001 chr3L_4460001 RAL-301_75b 1025 chr3L 4503910 4503933 chr3L 4503987 4504010 8 77 2.5 0.5 1.5 3.2 100 chr3L 4503910 intron NT1 - chr3L 4503960 intron NT1 - chr3L 4504010 intron NT1 - chr3L_8_4500001 chr3L_4500001 RAL-301_75b 1026 chr3L 4519416 4519447 chr3L 4519493 4519521 20 77 1.0 0.0 0.5 13.3 105 chr3L 4519416 intron Tie - chr3L 4519468 intron Tie - chr3L 4519521 intron Tie - chr3L_20_4515001 chr3L_4515001 RAL-301_75b 1027 chr3L 4547100 4547130 chr3L 4547365 4547391 16 265 2.5 3.5 3.0 4.0 291 chr3L 4547100 intron CG11357 + chr3L 4547246 intron CG11357 + chr3L 4547391 intron CG11357 + chr3L_16_4545001 chr3L_4545001 RAL-301_75b 1028 chr3L 4580312 4580336 chr3L 4580398 4580419 10 85 6.5 8.0 7.2 1.2 107 chr3L 4580312 intron CG42540 + chr3L 4580366 intron CG42540 + chr3L 4580419 intron CG42540 + chr3L_10_4580001 chr3L_4580001 RAL-301_75b 1029 chr3L 4607280 4607288 chr3L 4607371 4607379 8 91 0.0 6.0 3.0 2.0 99 chr3L 4607280 intron Src64B - chr3L 4607330 intron Src64B - chr3L 4607379 intron Src64B - chr3L_8_4605001 chr3L_4605001 RAL-301_75b 1030 chr3L 4685565 4685588 chr3L 4685939 4685962 8 374 2.5 2.0 2.2 2.5 397 chr3L 4685565 intron axo - chr3L 4685764 intron axo - chr3L 4685962 intron axo - chr3L_8_4685001 chr3L_4685001 RAL-301_75b 1031 chr3L 4744410 4744434 chr3L 4744490 4744514 4 80 3.0 0.5 1.8 1.4 104 chr3L 4744410 intron RhoGEF64C + chr3L 4744462 intron RhoGEF64C + chr3L 4744514 intron RhoGEF64C + chr3L_4_4740001 chr3L_4740001 RAL-301_75b 1032 chr3L 4853428 4853453 chr3L 4853519 4853543 11 90 4.0 4.0 4.0 2.2 115 chr3L 4853428 intergenic not near genes chr3L 4853486 intergenic not near genes chr3L 4853543 intergenic not near genes chr3L_11_4850001 chr3L_4850001 RAL-301_75b 1033 chr3L 4858305 4858330 chr3L 4858395 4858418 7 90 3.5 1.5 2.5 2.0 113 chr3L 4858305 intergenic not near genes chr3L 4858362 intergenic not near genes chr3L 4858418 intergenic not near genes chr3L_7_4855001 chr3L_4855001 RAL-301_75b 1034 chr3L 4899488 4899514 chr3L 4899637 4899665 16 150 4.0 2.5 3.2 3.8 177 chr3L 4899488 intron CG13704 + chr3L 4899576 intron CG13704 + chr3L 4899665 intron CG13704 + chr3L_16_4895001 chr3L_4895001 RAL-301_75b 1035 chr3L 5020645 5020647 chr3L 5020726 5020728 5 81 0.0 0.0 0.0 5.0 83 chr3L 5020645 intron Con - chr3L 5020686 intron Con - chr3L 5020728 intron Con - chr3L_5_5020001 chr3L_5020001 RAL-301_75b 1036 chr3L 5034156 5034192 chr3L 5043308 5043344 roo 10 9152 4.5 0.0 2.2 3.1 9188 chr3L 5034156 intron Con - chr3L 5038750 intron Con - chr3L 5043344 intron Con - chr3L_10_5035001 chr3L_5035001 RAL-301_75b 1037 chr3L 5045461 5045483 chr3L 5050242 5050264 Doc 8 4781 4.0 7.0 5.5 1.2 4803 chr3L 5045461 intron Con - chr3L 5047862 intron Con - chr3L 5050264 intron Con - chr3L_8_5045001 chr3L_5045001 RAL-301_75b 1038 chr3L 5103612 5103632 chr3L 5103692 5103712 4 80 4.5 0.0 2.2 1.2 100 chr3L 5103612 intergenic not near genes chr3L 5103662 intergenic not near genes chr3L 5103712 intergenic not near genes chr3L_4_5100001 chr3L_5100001 RAL-301_75b 1039 chr3L 5104491 5104509 chr3L 5124625 5124642 12 20134 1.5 10.5 6.0 1.7 20151 chr3L 5104491 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124642 intergenic not near genes chr3L_12_5110001 chr3L_5110001 RAL-301_75b 1040 chr3L 5164636 5164666 chr3L 5164712 5164742 19 76 4.5 2.0 3.2 4.5 106 chr3L 5164636 intron shep - chr3L 5164689 intron shep - chr3L 5164742 intron shep - chr3L_19_5160001 chr3L_5160001 RAL-301_75b 1041 chr3L 5188803 5188815 chr3L 5189553 5189563 4 750 5.0 5.0 5.0 0.7 760 chr3L 5188803 intron shep - chr3L 5189183 intron shep - chr3L 5189563 intron shep - chr3L_4_5185001 chr3L_5185001 RAL-301_75b 1042 chr3L 5265346 5265379 chr3L 5265454 5265487 5 108 1.0 2.0 1.5 2.0 141 chr3L 5265346 intron shep - chr3L 5265416 intron shep - chr3L 5265487 intron shep - chr3L_5_5265001 chr3L_5265001 RAL-301_75b 1043 chr3L 5271170 5271203 chr3L 5271248 5271281 7 78 1.5 3.0 2.2 2.2 111 chr3L 5271170 intron shep - chr3L 5271226 intron shep - chr3L 5271281 intron shep - chr3L_7_5270001 chr3L_5270001 RAL-301_75b 1044 chr3L 5310361 5310374 chr3L 5310487 5310501 5 127 2.5 2.5 2.5 1.4 140 chr3L 5310361 intergenic not near genes chr3L 5310431 intergenic not near genes chr3L 5310501 intergenic not near genes chr3L_5_5310001 chr3L_5310001 RAL-301_75b 1045 chr3L 5376038 5376041 chr3L 5376117 5376120 4 78 0.0 0.0 0.0 4.0 82 chr3L 5376038 intergenic not near genes chr3L 5376079 intergenic not near genes chr3L 5376120 intergenic not near genes chr3L_4_5375001 chr3L_5375001 RAL-301_75b 1046 chr3L 5396492 5396497 chr3L 5396579 5396584 4 87 0.0 4.5 2.2 1.2 92 chr3L 5396492 intergenic not near genes chr3L 5396538 intergenic not near genes chr3L 5396584 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-301_75b 1047 chr3L 5449540 5449562 chr3L 5449618 5449641 7 79 2.5 0.0 1.2 3.2 101 chr3L 5449540 intergenic not near genes chr3L 5449590 intergenic not near genes chr3L 5449641 intergenic not near genes chr3L_7_5445001 chr3L_5445001 RAL-301_75b 1048 chr3L 5514745 5514761 chr3L 5514822 5514838 11 77 3.5 2.0 2.8 2.9 93 chr3L 5514745 intron Lkr - chr3L 5514792 intron Lkr - chr3L 5514838 intron Lkr - chr3L_11_5510001 chr3L_5510001 RAL-301_75b 1049 chr3L 5537719 5537753 chr3L 5538061 5538094 jockey 14 342 3.5 1.0 2.2 4.4 375 chr3L 5537719 intergenic not near genes chr3L 5537906 intergenic not near genes chr3L 5538094 intergenic CG10625 - chr3L_14_5535001 chr3L_5535001 RAL-301_75b 1050 chr3L 5615059 5615075 chr3L 5615153 5615169 11 94 4.5 5.0 4.8 1.9 110 chr3L 5615059 intergenic not near genes chr3L 5615114 intergenic not near genes chr3L 5615169 intergenic not near genes chr3L_11_5615001 chr3L_5615001 RAL-301_75b 1051 chr3L 5633209 5633209 chr3L 6155946 6155946 4 522737 19.0 3.5 11.2 0.3 522737 chr3L 5633209 intron Blimp-1 + chr3L 5894578 intergenic not near genes chr3L 6155946 intergenic not near genes chr3L_4_5890001 chr3L_5890001 RAL-301_75b 1052 chr3L 5747459 5747470 chr3L 5747544 5747555 4 85 6.5 1.0 3.8 0.8 96 chr3L 5747459 3` UTR sif + chr3L 5747507 3` UTR sif + chr3L 5747555 3` UTR sif + chr3L_4_5745001 chr3L_5745001 RAL-301_75b 1053 chr3L 5788701 5788736 chr3L 5788827 5788862 12 126 1.5 1.5 1.5 4.8 161 chr3L 5788701 intergenic not near genes chr3L 5788782 intergenic not near genes chr3L 5788862 intergenic not near genes chr3L_12_5785001 chr3L_5785001 RAL-301_75b 1054 chr3L 5908079 5908106 chr3L 5908159 5908186 5 80 1.0 0.5 0.8 2.8 107 chr3L 5908079 intron CG13288 + chr3L 5908132 intron CG13288 + chr3L 5908186 intron CG13288 + chr3L_5_5905001 chr3L_5905001 RAL-301_75b 1055 chr3L 5910035 5910062 chr3L 5910276 5910303 pogo 16 241 2.5 2.0 2.2 5.0 268 chr3L 5910035 intron CG13288 + chr3L 5910169 intron CG13288 + chr3L 5910303 intron CG13288 + chr3L_16_5910001 chr3L_5910001 RAL-301_75b 1056 chr3L 5926318 5926346 chr3L 5926508 5926536 BS 17 190 1.0 1.0 1.0 8.5 218 chr3L 5926318 intron Vap-33B + chr3L 5926427 intron Vap-33B + chr3L 5926536 intron Vap-33B + chr3L_17_5925001 chr3L_5925001 RAL-301_75b 1057 chr3L 5992601 5992621 chr3L 5992703 5992723 11 102 2.5 2.5 2.5 3.1 122 chr3L 5992601 intergenic not near genes chr3L 5992662 intergenic not near genes chr3L 5992723 intergenic not near genes chr3L_11_5990001 chr3L_5990001 RAL-301_75b 1058 chr3L 6049238 6049268 chr3L 6049441 6049469 10 202 23.0 28.5 25.8 0.4 231 chr3L 6049238 intergenic not near genes chr3L 6049354 intergenic not near genes chr3L 6049469 intergenic not near genes chr3L_10_6045001 chr3L_6045001 RAL-301_75b 1059 chr3L 6052660 6052666 chr3L 6052744 6052751 4 84 2.5 3.0 2.8 1.1 91 chr3L 6052660 exon Jon65Aii + chr3L 6052706 intron Jon65Aii + chr3L 6052751 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-301_75b 1060 chr3L 6065014 6065029 chr3L 6065091 6065106 4 77 3.0 0.5 1.8 1.4 92 chr3L 6065014 intergenic not near genes chr3L 6065060 intergenic not near genes chr3L 6065106 intergenic not near genes chr3L_4_6065001 chr3L_6065001 RAL-301_75b 1061 chr3L 6119148 6119168 chr3L 6119225 6119245 7 77 0.5 0.0 0.2 5.8 97 chr3L 6119148 exon Ets65A + chr3L 6119196 intron Ets65A + chr3L 6119245 intron Ets65A + chr3L_7_6115001 chr3L_6115001 RAL-301_75b 1062 chr3L 6220913 6220944 chr3L 6230065 6230096 roo 4 9152 2.5 5.5 4.0 0.8 9183 chr3L 6220913 5` UTR pncr008:3L + chr3L 6225504 intergenic not near genes chr3L 6230096 intergenic not near genes chr3L_4_6225001 chr3L_6225001 RAL-301_75b 1063 chr3L 6259248 6259285 chr3L 6261293 6261330 5 2045 21.5 36.5 29.0 0.2 2082 chr3L 6259248 3` UTR ImpL3 - chr3L 6260289 exon ImpL3 - chr3L 6261330 intron ImpL3 - chr3L_5_6260001 chr3L_6260001 RAL-301_75b 1064 chr3L 6278212 6278224 chr3L 6278288 6278300 5 76 2.5 0.0 1.2 2.3 88 chr3L 6278212 intergenic not near genes chr3L 6278256 intergenic not near genes chr3L 6278300 intergenic not near genes chr3L_5_6275001 chr3L_6275001 RAL-301_75b 1065 chr3L 6335008 6335042 chr3L 6335479 6335513 297 10 471 1.0 4.5 2.8 2.6 505 chr3L 6335008 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335513 intron CG13300 - chr3L_10_6335001 chr3L_6335001 RAL-301_75b 1066 chr3L 6362384 6362401 chr3L 6362461 6362478 9 77 8.5 0.0 4.2 1.7 94 chr3L 6362384 intergenic not near genes chr3L 6362431 intergenic not near genes chr3L 6362478 intergenic not near genes chr3L_9_6360001 chr3L_6360001 RAL-301_75b 1067 chr3L 6405659 6405666 chr3L 6432123 6432129 roo 4 26464 1.5 1.5 1.5 1.6 26470 chr3L 6405659 intron CG42747 + chr3L 6418894 intron CG42747 + chr3L 6432129 intron CG42747 + chr3L_4_6415001 chr3L_6415001 RAL-301_75b 1068 chr3L 6512274 6512293 chr3L 6512360 6512379 9 85 2.5 2.5 2.5 2.6 105 chr3L 6512274 intron sfl + chr3L 6512326 intron sfl + chr3L 6512379 intron sfl + chr3L_9_6510001 chr3L_6510001 RAL-301_75b 1069 chr3L 6620536 6620545 chr3L 6621060 6621069 Rt1c 6 524 3.0 6.5 4.8 1.0 533 chr3L 6620536 intergenic not near genes chr3L 6620802 intergenic not near genes chr3L 6621069 intergenic not near genes chr3L_6_6620001 chr3L_6620001 RAL-301_75b 1070 chr3L 6723716 6723723 chr3L 6723813 6723820 6 97 6.0 4.0 5.0 1.0 104 chr3L 6723716 intergenic not near genes chr3L 6723768 intergenic not near genes chr3L 6723820 intergenic not near genes chr3L_6_6720001 chr3L_6720001 RAL-301_75b 1071 chr3L 6781123 6781142 chr3L 6783136 6783155 Doc 9 2013 3.5 0.0 1.8 3.2 2032 chr3L 6781123 intergenic not near genes chr3L 6782139 intergenic not near genes chr3L 6783155 intergenic not near genes chr3L_9_6780001 chr3L_6780001 RAL-301_75b 1072 chr3L 6855942 6855956 chr3L 6860726 6860740 Doc 5 4784 2.5 4.5 3.5 1.1 4798 chr3L 6855942 intergenic not near genes chr3L 6858341 intergenic not near genes chr3L 6860740 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-301_75b 1073 chr3L 6887522 6887551 chr3L 6895014 6895042 roo 14 7491 4.5 4.5 4.5 2.5 7520 chr3L 6887522 intergenic not near genes chr3L 6891282 intergenic not near genes chr3L 6895042 intergenic not near genes chr3L_14_6890001 chr3L_6890001 RAL-301_75b 1074 chr3L 6915812 6915832 chr3L 6916093 6916111 10 281 1.5 0.5 1.0 5.0 299 chr3L 6915812 intergenic not near genes chr3L 6915962 intergenic not near genes chr3L 6916111 intergenic not near genes chr3L_10_6915001 chr3L_6915001 RAL-301_75b 1075 chr3L 6974503 6974517 chr3L 6974604 6974618 7 101 0.0 4.5 2.2 2.2 115 chr3L 6974503 intron Galphai - chr3L 6974560 intron Galphai - chr3L 6974618 intron Galphai - chr3L_7_6970001 chr3L_6970001 RAL-301_75b 1076 chr3L 6994885 6994916 chr3L 6995496 6995527 BS 15 611 0.0 5.0 2.5 4.3 642 chr3L 6994885 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995527 intergenic not near genes chr3L_15_6995001 chr3L_6995001 RAL-301_75b 1077 chr3L 7022026 7022049 chr3L 7022234 7022257 11 207 1.0 5.0 3.0 2.8 231 chr3L 7022026 intron Mp + chr3L 7022142 intron Mp + chr3L 7022257 intron Mp + chr3L_11_7020001 chr3L_7020001 RAL-301_75b 1078 chr3L 7029606 7029622 chr3L 7030133 7030149 4 527 5.5 4.0 4.8 0.7 543 chr3L 7029606 intron Mp + chr3L 7029878 intron Mp + chr3L 7030149 intron Mp + chr3L_4_7025001 chr3L_7025001 RAL-301_75b 1079 chr3L 7067139 7067175 chr3L 7067322 7067358 8 183 4.5 3.0 3.8 1.7 219 chr3L 7067139 intron,intron CG8641 -,CG14823 + chr3L 7067248 intron,intron CG8641 -,CG14823 + chr3L 7067358 intron,intron CG8641 -,CG14823 + chr3L_8_7065001 chr3L_7065001 RAL-301_75b 1080 chr3L 7090023 7090055 chr3L 7090104 7090135 18 81 2.5 2.5 2.5 5.1 112 chr3L 7090023 intergenic not near genes chr3L 7090079 intergenic not near genes chr3L 7090135 intergenic not near genes chr3L_18_7090001 chr3L_7090001 RAL-301_75b 1081 chr3L 7100427 7100465 chr3L 7100514 7100550 20 87 5.0 5.0 5.0 3.3 123 chr3L 7100427 intron form3 + chr3L 7100488 intron form3 + chr3L 7100550 intron form3 + chr3L_20_7100001 chr3L_7100001 RAL-301_75b 1082 chr3L 7112594 7112605 chr3L 7112681 7112689 7 86 7.0 4.5 5.8 1.0 95 chr3L 7112594 intron form3 + chr3L 7112642 intron form3 + chr3L 7112689 intron form3 + chr3L_7_7110001 chr3L_7110001 RAL-301_75b 1083 chr3L 7150886 7150897 chr3L 7150962 7150973 4 76 1.5 6.5 4.0 0.8 87 chr3L 7150886 intron corn - chr3L 7150930 intron corn - chr3L 7150973 intron corn - chr3L_4_7150001 chr3L_7150001 RAL-301_75b 1084 chr3L 7187409 7187414 chr3L 7187490 7187496 4 82 0.5 7.0 3.8 0.8 87 chr3L 7187409 intron Dscam2 - chr3L 7187452 intron Dscam2 - chr3L 7187496 intron Dscam2 - chr3L_4_7185001 chr3L_7185001 RAL-301_75b 1085 chr3L 7285455 7285467 chr3L 7285532 7285545 9 78 4.5 3.5 4.0 1.8 90 chr3L 7285455 intron unc-13-4A - chr3L 7285500 intron unc-13-4A - chr3L 7285545 intron unc-13-4A - chr3L_9_7285001 chr3L_7285001 RAL-301_75b 1086 chr3L 7358302 7358322 chr3L 7359585 7359603 9 1283 22.0 23.5 22.8 0.4 1301 chr3L 7358302 exon pst - chr3L 7358952 exon pst - chr3L 7359603 intron pst - chr3L_9_7355001 chr3L_7355001 RAL-301_75b 1087 chr3L 7377314 7377347 chr3L 7380419 7380452 297 7 3105 1.0 4.5 2.8 1.8 3138 chr3L 7377314 intron SMSr - chr3L 7378883 intron SMSr - chr3L 7380452 intron SMSr - chr3L_7_7375001 chr3L_7375001 RAL-301_75b 1088 chr3L 7449445 7449456 chr3L 7449520 7449533 9 77 0.0 6.5 3.2 2.1 88 chr3L 7449445 intron CG42458 + chr3L 7449489 intron CG42458 + chr3L 7449533 intron CG42458 + chr3L_9_7445001 chr3L_7445001 RAL-301_75b 1089 chr3L 7450694 7450712 chr3L 7450777 7450795 5 83 2.5 0.0 1.2 2.3 101 chr3L 7450694 intron CG42458 + chr3L 7450744 intron CG42458 + chr3L 7450795 intron CG42458 + chr3L_5_7450001 chr3L_7450001 RAL-301_75b 1090 chr3L 7460371 7460393 chr3L 7460455 7460477 5 84 1.5 1.5 1.5 2.0 106 chr3L 7460371 intergenic not near genes chr3L 7460424 intergenic not near genes chr3L 7460477 intergenic not near genes chr3L_5_7460001 chr3L_7460001 RAL-301_75b 1091 chr3L 7462960 7462973 chr3L 7463037 7463050 6 77 1.0 1.5 1.2 2.7 90 chr3L 7462960 intergenic not near genes chr3L 7463005 intergenic not near genes chr3L 7463050 intergenic not near genes chr3L_6_7460001 chr3L_7460001 RAL-301_75b 1092 chr3L 7498765 7498785 chr3L 7503542 7503562 F-element 4 4777 1.5 5.5 3.5 0.9 4797 chr3L 7498765 5` UTR CG8539 - chr3L 7501164 intergenic not near genes chr3L 7503562 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-301_75b 1093 chr3L 7576212 7576238 chr3L 7576300 7576325 6 88 4.5 3.5 4.0 1.2 113 chr3L 7576212 intergenic not near genes chr3L 7576268 intergenic not near genes chr3L 7576325 intergenic not near genes chr3L_6_7575001 chr3L_7575001 RAL-301_75b 1094 chr3L 7581622 7581655 chr3L 7581706 7581739 10 84 5.0 3.0 4.0 2.0 117 chr3L 7581622 intergenic not near genes chr3L 7581680 intergenic not near genes chr3L 7581739 intergenic not near genes chr3L_10_7580001 chr3L_7580001 RAL-301_75b 1095 chr3L 7793718 7793745 chr3L 7800770 7800797 297 7 7052 2.5 10.0 6.2 1.0 7079 chr3L 7793718 intron CG32369 - chr3L 7797258 intron CG32369 - chr3L 7800797 intron CG32369 - chr3L_7_7795001 chr3L_7795001 RAL-301_75b 1096 chr3L 7814709 7814731 chr3L 7814794 7814816 8 84 4.0 4.5 4.2 1.5 107 chr3L 7814709 3` UTR Pdp1 - chr3L 7814762 3` UTR Pdp1 - chr3L 7814816 3` UTR Pdp1 - chr3L_8_7810001 chr3L_7810001 RAL-301_75b 1097 chr3L 7845386 7845395 chr3L 7845469 7845478 5 83 3.5 0.5 2.0 1.7 92 chr3L 7845386 intron Pdp1 - chr3L 7845432 intron Pdp1 - chr3L 7845478 intron Pdp1 - chr3L_5_7845001 chr3L_7845001 RAL-301_75b 1098 chr3L 7865755 7865780 chr3L 7865856 7865881 8 101 3.5 2.0 2.8 2.1 126 chr3L 7865755 intron Pdp1 - chr3L 7865818 intron Pdp1 - chr3L 7865881 intron Pdp1 - chr3L_8_7865001 chr3L_7865001 RAL-301_75b 1099 chr3L 7875037 7875049 chr3L 7876867 7876879 4 1830 8.5 17.5 13.0 0.3 1842 chr3L 7875037 intron CG32365 + chr3L 7875958 intron CG32365 + chr3L 7876879 intron CG32365 + chr3L_4_7875001 chr3L_7875001 RAL-301_75b 1100 chr3L 7886517 7886543 chr3L 7889035 7889061 Stalker4 10 2517 0.5 5.0 2.8 2.6 2544 chr3L 7886517 intron CG32365 + chr3L 7887789 intron CG32365 + chr3L 7889061 intron CG32365 + chr3L_10_7885001 chr3L_7885001 RAL-301_75b 1101 chr3L 7916836 7916859 chr3L 7926007 7926030 roo 10 9171 3.5 4.0 3.8 2.1 9194 chr3L 7916836 3` UTR syd - chr3L 7921433 intron syd - chr3L 7926030 3` UTR syd - chr3L_10_7920001 chr3L_7920001 RAL-301_75b 1102 chr3L 7985370 7985395 chr3L 7987698 7987723 NOF 14 2328 7.0 8.0 7.5 1.6 2353 chr3L 7985370 intron nmo + chr3L 7986546 intron nmo + chr3L 7987723 intron nmo + chr3L_14_7985001 chr3L_7985001 RAL-301_75b 1103 chr3L 7990852 7990888 chr3L 7990942 7990978 16 90 0.0 2.0 1.0 8.0 126 chr3L 7990852 intron nmo + chr3L 7990915 intron nmo + chr3L 7990978 intron nmo + chr3L_16_7990001 chr3L_7990001 RAL-301_75b 1104 chr3L 8019700 8019735 chr3L 8024112 8024145 NOF 15 4412 3.0 2.5 2.8 3.9 4445 chr3L 8019700 intron nmo + chr3L 8021922 intron nmo + chr3L 8024145 intron nmo + chr3L_15_8020001 chr3L_8020001 RAL-301_75b 1105 chr3L 8041553 8041562 chr3L 8041631 8041640 5 77 5.0 3.5 4.2 1.0 87 chr3L 8041553 intron nmo + chr3L 8041596 intron nmo + chr3L 8041640 intron nmo + chr3L_5_8040001 chr3L_8040001 RAL-301_75b 1106 chr3L 8081281 8081300 chr3L 8081384 8081403 5 103 1.0 1.0 1.0 2.5 122 chr3L 8081281 intron Ect4 + chr3L 8081342 intron Ect4 + chr3L 8081403 intron Ect4 + chr3L_5_8080001 chr3L_8080001 RAL-301_75b 1107 chr3L 8149764 8149776 chr3L 8149870 8149882 9 105 0.5 0.5 0.5 6.0 118 chr3L 8149764 intron CG13676 - chr3L 8149823 intron CG13676 - chr3L 8149882 intron CG13676 - chr3L_9_8145001 chr3L_8145001 RAL-301_75b 1108 chr3L 8165980 8165995 chr3L 8166064 8166079 5 83 1.5 0.0 0.8 2.8 99 chr3L 8165980 intergenic CG13675 - chr3L 8166030 intergenic not near genes chr3L 8166079 intergenic not near genes chr3L_5_8165001 chr3L_8165001 RAL-301_75b 1109 chr3L 8203548 8203568 chr3L 8203619 8203643 10 76 3.0 4.5 3.8 2.1 95 chr3L 8203548 intergenic CG13679 + chr3L 8203596 intergenic CG13679 + chr3L 8203643 intergenic CG13679 + chr3L_10_8200001 chr3L_8200001 RAL-301_75b 1110 chr3L 8214738 8214760 chr3L 8214824 8214846 5 86 3.5 4.0 3.8 1.0 108 chr3L 8214738 intergenic not near genes chr3L 8214792 intergenic CG8012 + chr3L 8214846 intergenic CG8012 + chr3L_5_8210001 chr3L_8210001 RAL-301_75b 1111 chr3L 8243823 8243848 chr3L 8243906 8243931 10 83 8.0 2.5 5.2 1.6 108 chr3L 8243823 intron Dscam4 + chr3L 8243877 intron Dscam4 + chr3L 8243931 intron Dscam4 + chr3L_10_8240001 chr3L_8240001 RAL-301_75b 1112 chr3L 8273055 8273079 chr3L 8273154 8273178 8 98 2.5 3.5 3.0 2.0 123 chr3L 8273055 intron Dscam4 + chr3L 8273116 intron Dscam4 + chr3L 8273178 exon Dscam4 + chr3L_8_8270001 chr3L_8270001 RAL-301_75b 1113 chr3L 8295793 8295824 chr3L 8295951 8295982 11 158 2.5 4.0 3.2 2.6 189 chr3L 8295793 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8295982 intergenic not near genes chr3L_11_8295001 chr3L_8295001 RAL-301_75b 1114 chr3L 8317596 8317596 chr3L 22908066 22908066 4 14590470 0.5 16.5 8.5 0.4 14590470 chr3L 8317596 intergenic not near genes chr3L 15612831 intergenic CG13449 -,comm3 - chr3L 22908066 intergenic not near genes chr3L_4_15610001 chr3L_15610001 RAL-301_75b 1115 chr3L 8395855 8395859 chr3L 8395951 8395954 5 96 4.0 3.0 3.5 1.1 99 chr3L 8395855 intergenic CG7120 + chr3L 8395904 intergenic CG7120 + chr3L 8395954 intergenic CG7120 + chr3L_5_8395001 chr3L_8395001 RAL-301_75b 1116 chr3L 8443567 8443572 chr3L 8443648 8443653 12 80 2.0 2.5 2.2 3.8 86 chr3L 8443567 3` UTR CG6983 - chr3L 8443610 3` UTR CG6983 - chr3L 8443653 3` UTR CG6983 - chr3L_12_8440001 chr3L_8440001 RAL-301_75b 1117 chr3L 8498296 8498326 chr3L 8505763 8505792 blood 7 7467 2.0 2.0 2.0 2.3 7496 chr3L 8498296 intron CG43163 - chr3L 8502044 intron CG43163 - chr3L 8505792 intron CG43163 - chr3L_7_8500001 chr3L_8500001 RAL-301_75b 1118 chr3L 8516286 8516311 chr3L 8519352 8519375 9 3064 17.0 17.5 17.2 0.5 3089 chr3L 8516286 exon CG6765 + chr3L 8517830 3` UTR CG6765 + chr3L 8519375 intron GstO3 + chr3L_9_8515001 chr3L_8515001 RAL-301_75b 1119 chr3L 8579870 8579873 chr3L 8579950 8579952 6 80 4.5 6.0 5.2 1.0 82 chr3L 8579870 intron CG43078 + chr3L 8579911 intron CG43078 + chr3L 8579952 intron CG43078 + chr3L_6_8575001 chr3L_8575001 RAL-301_75b 1120 chr3L 8643655 8643670 chr3L 8643740 8643755 6 85 0.5 5.5 3.0 1.5 100 chr3L 8643655 intergenic Cpr66D + chr3L 8643705 intergenic Cpr66D + chr3L 8643755 intergenic Cpr66D + chr3L_6_8640001 chr3L_8640001 RAL-301_75b 1121 chr3L 8791282 8791292 chr3L 8796702 8796712 I-element 5 5420 4.0 0.0 2.0 1.7 5430 chr3L 8791282 exon Fhos + chr3L 8793997 intron Fhos + chr3L 8796712 intron Fhos + chr3L_5_8790001 chr3L_8790001 RAL-301_75b 1122 chr3L 8830761 8830782 chr3L 8830862 8830881 12 100 3.5 4.0 3.8 2.5 120 chr3L 8830761 intron dally + chr3L 8830821 intron dally + chr3L 8830881 intron dally + chr3L_12_8830001 chr3L_8830001 RAL-301_75b 1123 chr3L 8839732 8839748 chr3L 8839812 8839828 4 80 1.5 0.0 0.8 2.2 96 chr3L 8839732 intron dally + chr3L 8839780 intron dally + chr3L 8839828 intron dally + chr3L_4_8835001 chr3L_8835001 RAL-301_75b 1124 chr3L 8861528 8861553 chr3L 8861619 8861644 5 91 0.0 4.5 2.2 1.6 116 chr3L 8861528 intron dally + chr3L 8861586 intron dally + chr3L 8861644 intron dally + chr3L_5_8860001 chr3L_8860001 RAL-301_75b 1125 chr3L 9030435 9030437 chr3L 9030514 9030514 5 78 3.0 0.0 1.5 2.0 79 chr3L 9030435 intergenic not near genes chr3L 9030474 intergenic not near genes chr3L 9030514 intergenic not near genes chr3L_5_9030001 chr3L_9030001 RAL-301_75b 1126 chr3L 9036289 9036304 chr3L 9036372 9036387 4 84 0.5 7.5 4.0 0.8 98 chr3L 9036289 intergenic not near genes chr3L 9036338 intergenic not near genes chr3L 9036387 intergenic not near genes chr3L_4_9035001 chr3L_9035001 RAL-301_75b 1127 chr3L 9076932 9076949 chr3L 9084489 9084509 412 9 7559 3.0 3.5 3.2 2.1 7577 chr3L 9076932 exon Tequila + chr3L 9080720 intron Tequila + chr3L 9084509 exon Tequila + chr3L_9_9080001 chr3L_9080001 RAL-301_75b 1128 chr3L 9128202 9128220 chr3L 9128286 9128305 13 85 3.0 6.5 4.8 2.2 103 chr3L 9128202 intron bol - chr3L 9128254 intron bol - chr3L 9128305 intron bol - chr3L_13_9125001 chr3L_9125001 RAL-301_75b 1129 chr3L 9130567 9130582 chr3L 9134328 9134343 412 7 3761 9.0 7.5 8.2 0.8 3776 chr3L 9130567 intergenic bol - chr3L 9132455 intergenic not near genes chr3L 9134343 intergenic Dhpr + chr3L_7_9130001 chr3L_9130001 RAL-301_75b 1130 chr3L 9164697 9164726 chr3L 9166164 9166193 hobo 13 1467 2.0 0.0 1.0 6.5 1496 chr3L 9164697 intron Rdl - chr3L 9165445 intron Rdl - chr3L 9166193 intron Rdl - chr3L_13_9165001 chr3L_9165001 RAL-301_75b 1131 chr3L 9219246 9219267 chr3L 9219918 9219938 jockey 6 670 10.5 5.0 7.8 0.7 692 chr3L 9219246 intergenic not near genes chr3L 9219592 intergenic not near genes chr3L 9219938 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-301_75b 1132 chr3L 9348466 9348483 chr3L 9348968 9348985 4 501 2.5 0.0 1.2 1.8 519 chr3L 9348466 intergenic PGRP-LC + chr3L 9348726 intergenic PGRP-LC + chr3L 9348985 intergenic not near genes chr3L_4_9345001 chr3L_9345001 RAL-301_75b 1133 chr3L 9359590 9359623 chr3L 9359681 9359714 13 91 1.0 6.0 3.5 2.9 124 chr3L 9359590 3` UTR CG32039 + chr3L 9359652 3` UTR CG32039 + chr3L 9359714 3` UTR CG32039 + chr3L_13_9355001 chr3L_9355001 RAL-301_75b 1134 chr3L 9443517 9443529 chr3L 9445308 9445320 S-element 10 1791 1.0 1.5 1.2 4.5 1803 chr3L 9443517 intron CG33926 + chr3L 9444418 intron CG33926 + chr3L 9445320 intron CG33926 + chr3L_10_9440001 chr3L_9440001 RAL-301_75b 1135 chr3L 9501698 9501731 chr3L 9502184 9502214 roo 17 485 3.0 2.0 2.5 4.9 516 chr3L 9501698 intron path - chr3L 9501956 intron path - chr3L 9502214 intron path - chr3L_17_9500001 chr3L_9500001 RAL-301_75b 1136 chr3L 9559380 9559411 chr3L 9559513 9559546 7 134 1.5 3.0 2.2 2.2 166 chr3L 9559380 intron CG42673 + chr3L 9559463 intron CG42673 + chr3L 9559546 intron CG42673 + chr3L_7_9555001 chr3L_9555001 RAL-301_75b 1137 chr3L 9571910 9571937 chr3L 9572258 9572285 jockey 12 348 1.0 4.0 2.5 3.4 375 chr3L 9571910 intron CG42673 + chr3L 9572098 intron CG42673 + chr3L 9572285 intron CG42673 + chr3L_12_9570001 chr3L_9570001 RAL-301_75b 1138 chr3L 9575905 9575933 chr3L 9580983 9581010 jockey 10 5078 3.5 1.0 2.2 3.1 5105 chr3L 9575905 intron CG42673 + chr3L 9578458 intron CG42673 + chr3L 9581010 intron CG42673 + chr3L_10_9575001 chr3L_9575001 RAL-301_75b 1139 chr3L 9646469 9646481 chr3L 9646593 9646606 5 124 8.5 0.0 4.2 1.0 137 chr3L 9646469 intron,intron fry -,CG33696 + chr3L 9646538 intron,intron fry -,CG33696 + chr3L 9646606 intron,intron fry -,CG33696 + chr3L_5_9645001 chr3L_9645001 RAL-301_75b 1140 chr3L 9646808 9646829 chr3L 9646906 9646927 12 98 2.5 0.5 1.5 4.8 119 chr3L 9646808 intron,intron fry -,CG33696 + chr3L 9646868 intron,intron fry -,CG33696 + chr3L 9646927 intron,intron fry -,CG33696 + chr3L_12_9645001 chr3L_9645001 RAL-301_75b 1141 chr3L 9665844 9665854 chr3L 9666060 9666070 4 216 2.5 4.5 3.5 0.9 226 chr3L 9665844 intron fry - chr3L 9665957 intron fry - chr3L 9666070 intron fry - chr3L_4_9665001 chr3L_9665001 RAL-301_75b 1142 chr3L 9775383 9775397 chr3L 9775743 9775757 8 360 0.0 6.5 3.2 1.9 374 chr3L 9775383 intron CG8177 + chr3L 9775570 intron CG8177 + chr3L 9775757 intron CG8177 + chr3L_8_9775001 chr3L_9775001 RAL-301_75b 1143 chr3L 9831709 9831724 chr3L 9831790 9831805 10 81 0.5 3.5 2.0 3.3 96 chr3L 9831709 intron CG43897 + chr3L 9831757 intron CG43897 + chr3L 9831805 intron CG43897 + chr3L_10_9830001 chr3L_9830001 RAL-301_75b 1144 chr3L 9895358 9895389 chr3L 9895437 9895467 16 80 2.0 1.5 1.8 5.7 109 chr3L 9895358 3` UTR CG6707 - chr3L 9895412 3` UTR CG6707 - chr3L 9895467 3` UTR CG6707 - chr3L_16_9895001 chr3L_9895001 RAL-301_75b 1145 chr3L 9918785 9918821 chr3L 9918997 9919033 11 212 3.5 1.5 2.5 3.1 248 chr3L 9918785 intron CG34356 + chr3L 9918909 intron CG34356 + chr3L 9919033 intron CG34356 + chr3L_11_9915001 chr3L_9915001 RAL-301_75b 1146 chr3L 9929675 9929701 chr3L 9938455 9938481 roo 10 8779 1.5 5.0 3.2 2.4 8806 chr3L 9929675 intron CG34356 + chr3L 9934078 intron CG34356 + chr3L 9938481 intron CG34356 + chr3L_10_9930001 chr3L_9930001 RAL-301_75b 1147 chr3L 9966787 9966801 chr3L 9970296 9970311 9 3510 31.5 27.0 29.2 0.3 3524 chr3L 9966787 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968549 5` UTR Nc + chr3L 9970311 exon Nc + chr3L_9_9965001 chr3L_9965001 RAL-301_75b 1148 chr3L 10003150 10003161 chr3L 10003247 10003258 7 97 3.0 2.5 2.8 1.8 108 chr3L 10003150 intron dpr6 + chr3L 10003204 intron dpr6 + chr3L 10003258 intron dpr6 + chr3L_7_10000001 chr3L_10000001 RAL-301_75b 1149 chr3L 10007193 10007204 chr3L 10007296 10007307 5 103 2.5 2.5 2.5 1.4 114 chr3L 10007193 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007307 intron dpr6 + chr3L_5_10005001 chr3L_10005001 RAL-301_75b 1150 chr3L 10049547 10049574 chr3L 10049623 10049654 7 79 5.5 2.5 4.0 1.4 107 chr3L 10049547 intron dpr6 + chr3L 10049600 intron dpr6 + chr3L 10049654 intron dpr6 + chr3L_7_10045001 chr3L_10045001 RAL-301_75b 1151 chr3L 10082567 10082570 chr3L 10082649 10082652 4 82 4.0 1.0 2.5 1.1 85 chr3L 10082567 intron dpr6 + chr3L 10082610 intron dpr6 + chr3L 10082652 intron dpr6 + chr3L_4_10080001 chr3L_10080001 RAL-301_75b 1152 chr3L 10116180 10116189 chr3L 10116256 10116266 6 76 0.0 0.5 0.2 5.0 86 chr3L 10116180 intron dpr6 + chr3L 10116223 intron dpr6 + chr3L 10116266 intron dpr6 + chr3L_6_10115001 chr3L_10115001 RAL-301_75b 1153 chr3L 10258947 10258952 chr3L 10259118 10259125 4 172 1.0 5.0 3.0 1.0 178 chr3L 10258947 intergenic not near genes chr3L 10259036 intergenic not near genes chr3L 10259125 intergenic not near genes chr3L_4_10255001 chr3L_10255001 RAL-301_75b 1154 chr3L 10298668 10298697 chr3L 10298755 10298784 10 87 1.0 0.5 0.8 5.6 116 chr3L 10298668 intergenic not near genes chr3L 10298726 intergenic not near genes chr3L 10298784 intergenic not near genes chr3L_10_10295001 chr3L_10295001 RAL-301_75b 1155 chr3L 10308737 10308768 chr3L 10308814 10308845 10 77 4.0 1.0 2.5 2.9 108 chr3L 10308737 intergenic not near genes chr3L 10308791 intergenic not near genes chr3L 10308845 intergenic not near genes chr3L_10_10305001 chr3L_10305001 RAL-301_75b 1156 chr3L 10414953 10414976 chr3L 10417322 10417347 Doc 16 2371 4.0 4.0 4.0 3.2 2394 chr3L 10414953 intergenic CG12362 + chr3L 10416150 intergenic not near genes chr3L 10417347 intergenic not near genes chr3L_16_10415001 chr3L_10415001 RAL-301_75b 1157 chr3L 10481220 10481255 chr3L 10481299 10481334 11 79 5.0 4.0 4.5 2.0 114 chr3L 10481220 intergenic A2bp1 + chr3L 10481277 intergenic A2bp1 + chr3L 10481334 intergenic A2bp1 + chr3L_11_10480001 chr3L_10480001 RAL-301_75b 1158 chr3L 10528602 10528623 chr3L 10528690 10528711 12 88 9.0 1.5 5.2 1.9 109 chr3L 10528602 intron A2bp1 + chr3L 10528656 intron A2bp1 + chr3L 10528711 intron A2bp1 + chr3L_12_10525001 chr3L_10525001 RAL-301_75b 1159 chr3L 10584289 10584300 chr3L 10584376 10584387 7 86 3.0 1.5 2.2 2.2 98 chr3L 10584289 intron A2bp1 + chr3L 10584338 intron A2bp1 + chr3L 10584387 intron A2bp1 + chr3L_7_10580001 chr3L_10580001 RAL-301_75b 1160 chr3L 10621853 10621877 chr3L 10621940 10621964 6 86 0.5 2.0 1.2 2.7 111 chr3L 10621853 intergenic not near genes chr3L 10621908 intergenic not near genes chr3L 10621964 intergenic not near genes chr3L_6_10620001 chr3L_10620001 RAL-301_75b 1161 chr3L 10721996 10722020 chr3L 10722078 10722102 9 81 3.0 0.0 1.5 3.6 106 chr3L 10721996 intergenic not near genes chr3L 10722049 intergenic not near genes chr3L 10722102 intergenic not near genes chr3L_9_10720001 chr3L_10720001 RAL-301_75b 1162 chr3L 10956184 10956204 chr3L 15253229 15253229 5 4297033 12.5 9.0 10.8 0.4 4297045 chr3L 10956184 intergenic not near genes chr3L 13104706 intergenic not near genes chr3L 15253229 intergenic not near genes chr3L_5_13100001 chr3L_13100001 RAL-301_75b 1163 chr3L 10956454 10956469 chr3L 10956572 10956587 7 118 0.5 5.0 2.8 1.8 133 chr3L 10956454 intergenic not near genes chr3L 10956520 intergenic not near genes chr3L 10956587 intergenic not near genes chr3L_7_10955001 chr3L_10955001 RAL-301_75b 1164 chr3L 10957007 10957018 chr3L 10957083 10957093 8 75 7.0 1.0 4.0 1.6 86 chr3L 10957007 intergenic not near genes chr3L 10957050 intergenic not near genes chr3L 10957093 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-301_75b 1165 chr3L 10958225 10958240 chr3L 10958307 10958318 11 81 2.5 4.0 3.2 2.6 93 chr3L 10958225 intergenic not near genes chr3L 10958272 intergenic not near genes chr3L 10958318 intergenic not near genes chr3L_11_10955001 chr3L_10955001 RAL-301_75b 1166 chr3L 11087062 11087088 chr3L 11088849 11088877 S-element 7 1788 2.0 2.0 2.0 2.3 1815 chr3L 11087062 intron JIL-1 - chr3L 11087970 intron JIL-1 - chr3L 11088877 intron JIL-1 - chr3L_7_11085001 chr3L_11085001 RAL-301_75b 1167 chr3L 11217513 11217536 chr3L 11217596 11217619 9 83 1.5 0.0 0.8 5.0 106 chr3L 11217513 intron CG42671 + chr3L 11217566 intron CG42671 + chr3L 11217619 intron CG42671 + chr3L_9_11215001 chr3L_11215001 RAL-301_75b 1168 chr3L 11264464 11264498 chr3L 11271416 11271450 17.6 8 6952 4.5 1.5 3.0 2.0 6986 chr3L 11264464 intergenic not near genes chr3L 11267957 intergenic not near genes chr3L 11271450 intergenic not near genes chr3L_8_11265001 chr3L_11265001 RAL-301_75b 1169 chr3L 11305800 11305807 chr3L 22908066 22908067 6 11602264 2.0 16.5 9.2 0.6 11602267 chr3L 11305800 intergenic not near genes chr3L 17106934 intron Rbp6 - chr3L 22908067 intergenic not near genes chr3L_6_17105001 chr3L_17105001 RAL-301_75b 1170 chr3L 11579558 11579584 chr3L 11579664 11579690 9 106 1.5 0.5 1.0 4.5 132 chr3L 11579558 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579690 intergenic CG43390 - chr3L_9_11575001 chr3L_11575001 RAL-301_75b 1171 chr3L 11588734 11588754 chr3L 11588890 11588910 15 156 3.0 6.0 4.5 2.7 176 chr3L 11588734 intergenic not near genes chr3L 11588822 intergenic not near genes chr3L 11588910 intergenic not near genes chr3L_15_11585001 chr3L_11585001 RAL-301_75b 1172 chr3L 11723081 11723116 chr3L 11727876 11727909 Doc 11 4795 5.0 4.0 4.5 2.0 4828 chr3L 11723081 3` UTR Bmcp + chr3L 11725495 intron Bmcp + chr3L 11727909 3` UTR Bmcp + chr3L_11_11725001 chr3L_11725001 RAL-301_75b 1173 chr3L 11729676 11729686 chr3L 11729752 11729762 6 76 4.0 3.0 3.5 1.3 86 chr3L 11729676 exon CG32088 + chr3L 11729719 intron CG32088 + chr3L 11729762 intron CG32088 + chr3L_6_11725001 chr3L_11725001 RAL-301_75b 1174 chr3L 11744011 11744027 chr3L 11744119 11744135 9 108 2.5 0.0 1.2 4.1 124 chr3L 11744011 exon CG6024 - chr3L 11744073 intron CG6024 - chr3L 11744135 intron CG6024 - chr3L_9_11740001 chr3L_11740001 RAL-301_75b 1175 chr3L 11757916 11757930 chr3L 11758013 11758025 4 96 3.0 0.0 1.5 1.6 109 chr3L 11757916 intron CG6024 - chr3L 11757970 intron CG6024 - chr3L 11758025 intron CG6024 - chr3L_4_11755001 chr3L_11755001 RAL-301_75b 1176 chr3L 11816782 11816817 chr3L 11816883 11816918 8 101 5.0 5.5 5.2 1.3 136 chr3L 11816782 3` UTR CG5946 - chr3L 11816850 3` UTR CG5946 - chr3L 11816918 3` UTR CG5946 - chr3L_8_11815001 chr3L_11815001 RAL-301_75b 1177 chr3L 11824522 11824541 chr3L 11824910 11824929 9 387 3.0 1.5 2.2 2.8 407 chr3L 11824522 exon CG32095 - chr3L 11824726 exon CG32095 - chr3L 11824929 exon CG32095 - chr3L_9_11820001 chr3L_11820001 RAL-301_75b 1178 chr3L 11833731 11833746 chr3L 11833835 11833850 8 104 1.5 2.0 1.8 2.9 119 chr3L 11833731 intergenic CycA - chr3L 11833790 intergenic CycA - chr3L 11833850 intergenic CycA - chr3L_8_11830001 chr3L_11830001 RAL-301_75b 1179 chr3L 11864553 11864578 chr3L 11865848 11865871 pogo 9 1294 4.5 5.5 5.0 1.5 1318 chr3L 11864553 intron CG44837 - chr3L 11865212 intron CG44837 - chr3L 11865871 intron CG44837 - chr3L_9_11865001 chr3L_11865001 RAL-301_75b 1180 chr3L 11887260 11887289 chr3L 11887357 11887391 7 97 0.0 3.5 1.8 2.5 131 chr3L 11887260 intron,3` UTR CG44837 -,CG5897 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887391 intron,3` UTR CG44837 -,CG5897 - chr3L_7_11885001 chr3L_11885001 RAL-301_75b 1181 chr3L 11905128 11905143 chr3L 11905210 11905225 12 82 2.5 5.0 3.8 2.5 97 chr3L 11905128 intron CG44837 - chr3L 11905176 intron CG44837 - chr3L 11905225 intron CG44837 - chr3L_12_11905001 chr3L_11905001 RAL-301_75b 1182 chr3L 11943500 11943517 chr3L 11943601 11943618 7 101 1.5 2.5 2.0 2.3 118 chr3L 11943500 intergenic Rpt4R +,CG5883 - chr3L 11943559 intergenic Rpt4R +,CG5883 - chr3L 11943618 intergenic CG5883 -,Rpt4R + chr3L_7_11940001 chr3L_11940001 RAL-301_75b 1183 chr3L 11961202 11961212 chr3L 11961302 11961316 4 102 4.5 3.0 3.8 0.8 114 chr3L 11961202 exon prc - chr3L 11961259 exon prc - chr3L 11961316 exon prc - chr3L_4_11960001 chr3L_11960001 RAL-301_75b 1184 chr3L 11984570 11984590 chr3L 11984661 11984678 11 90 3.5 0.5 2.0 3.7 108 chr3L 11984570 intergenic CG6938 + chr3L 11984624 intergenic CG6938 + chr3L 11984678 intergenic CG6938 + chr3L_11_11980001 chr3L_11980001 RAL-301_75b 1185 chr3L 12075434 12075447 chr3L 12075523 12075536 5 89 3.5 0.0 1.8 1.8 102 chr3L 12075434 intron Sema-5c - chr3L 12075485 intron Sema-5c - chr3L 12075536 intron Sema-5c - chr3L_5_12075001 chr3L_12075001 RAL-301_75b 1186 chr3L 12103913 12103922 chr3L 12103989 12103998 4 76 0.0 1.5 0.8 2.2 85 chr3L 12103913 intergenic not near genes chr3L 12103956 intergenic not near genes chr3L 12103998 intergenic not near genes chr3L_4_12100001 chr3L_12100001 RAL-301_75b 1187 chr3L 12105968 12106003 chr3L 12106055 12106090 12 87 4.0 3.5 3.8 2.5 122 chr3L 12105968 intergenic not near genes chr3L 12106029 intergenic not near genes chr3L 12106090 intergenic not near genes chr3L_12_12105001 chr3L_12105001 RAL-301_75b 1188 chr3L 12235852 12235865 chr3L 12235940 12235955 8 90 3.0 5.0 4.0 1.6 103 chr3L 12235852 intron app - chr3L 12235904 intron app - chr3L 12235955 intron app - chr3L_8_12235001 chr3L_12235001 RAL-301_75b 1189 chr3L 12261191 12261214 chr3L 12261293 12261316 10 101 0.0 4.5 2.2 3.1 125 chr3L 12261191 intron app - chr3L 12261254 intron app - chr3L 12261316 intron app - chr3L_10_12260001 chr3L_12260001 RAL-301_75b 1190 chr3L 12273101 12273114 chr3L 12273407 12273420 7 306 9.5 1.5 5.5 1.1 319 chr3L 12273101 intron CG4300 - chr3L 12273260 intron CG4300 - chr3L 12273420 intron CG4300 - chr3L_7_12270001 chr3L_12270001 RAL-301_75b 1191 chr3L 12335398 12335416 chr3L 12335477 12335493 7 78 4.5 4.5 4.5 1.3 95 chr3L 12335398 exon CG32105 + chr3L 12335446 3` UTR CG32105 + chr3L 12335493 3` UTR CG32105 + chr3L_7_12335001 chr3L_12335001 RAL-301_75b 1192 chr3L 12369537 12369559 chr3L 12369627 12369649 5 90 4.0 5.0 4.5 0.9 112 chr3L 12369537 intron Ncc69 - chr3L 12369593 intron Ncc69 - chr3L 12369649 intron Ncc69 - chr3L_5_12365001 chr3L_12365001 RAL-301_75b 1193 chr3L 12458490 12458496 chr3L 12458588 12458594 5 98 0.5 4.0 2.2 1.6 104 chr3L 12458490 intergenic not near genes chr3L 12458542 intergenic not near genes chr3L 12458594 intergenic not near genes chr3L_5_12455001 chr3L_12455001 RAL-301_75b 1194 chr3L 12488413 12488436 chr3L 12488538 12488563 11 127 2.0 1.5 1.8 3.9 150 chr3L 12488413 intron CG10660 - chr3L 12488488 intron CG10660 - chr3L 12488563 exon CG10660 - chr3L_11_12485001 chr3L_12485001 RAL-301_75b 1195 chr3L 12565358 12565390 chr3L 12565472 12565504 12 114 0.5 5.0 2.8 3.2 146 chr3L 12565358 intron sowah - chr3L 12565431 intron sowah - chr3L 12565504 intron sowah - chr3L_12_12565001 chr3L_12565001 RAL-301_75b 1196 chr3L 12593585 12593603 chr3L 12593665 12593683 8 80 0.5 6.0 3.2 1.9 98 chr3L 12593585 intron ara + chr3L 12593634 intron ara + chr3L 12593683 intron ara + chr3L_8_12590001 chr3L_12590001 RAL-301_75b 1197 chr3L 12681691 12681723 chr3L 12682044 12682076 8 352 2.0 4.5 3.2 1.9 385 chr3L 12681691 intergenic not near genes chr3L 12681884 intergenic not near genes chr3L 12682076 intergenic not near genes chr3L_8_12680001 chr3L_12680001 RAL-301_75b 1198 chr3L 12801979 12802011 chr3L 12802055 12802086 16 75 3.0 3.0 3.0 4.0 107 chr3L 12801979 intron Atg1 - chr3L 12802032 intron Atg1 - chr3L 12802086 intron Atg1 - chr3L_16_12800001 chr3L_12800001 RAL-301_75b 1199 chr3L 12874928 12874961 chr3L 12877219 12877253 jockey 7 2292 1.5 1.0 1.2 3.2 2325 chr3L 12874928 intergenic not near genes chr3L 12876090 intergenic not near genes chr3L 12877253 intergenic not near genes chr3L_7_12875001 chr3L_12875001 RAL-301_75b 1200 chr3L 12883363 12883381 chr3L 12883449 12883467 6 85 8.0 5.5 6.8 0.8 104 chr3L 12883363 intergenic not near genes chr3L 12883415 intergenic not near genes chr3L 12883467 intergenic not near genes chr3L_6_12880001 chr3L_12880001 RAL-301_75b 1201 chr3L 12896238 12896247 chr3L 12896313 12896325 4 77 3.0 0.5 1.8 1.4 87 chr3L 12896238 intergenic not near genes chr3L 12896282 intergenic not near genes chr3L 12896325 intergenic not near genes chr3L_4_12895001 chr3L_12895001 RAL-301_75b 1202 chr3L 12919282 12919302 chr3L 12924754 12924774 Rt1c 9 5472 1.5 3.0 2.2 2.8 5492 chr3L 12919282 intergenic not near genes chr3L 12922028 intergenic not near genes chr3L 12924774 intergenic not near genes chr3L_9_12920001 chr3L_12920001 RAL-301_75b 1203 chr3L 12926616 12926652 chr3L 12926695 12926731 17 79 2.5 3.0 2.8 4.5 115 chr3L 12926616 intergenic not near genes chr3L 12926674 intergenic not near genes chr3L 12926731 intergenic not near genes chr3L_17_12925001 chr3L_12925001 RAL-301_75b 1204 chr3L 12957788 12957817 chr3L 12962270 12962299 copia 9 4482 4.0 10.0 7.0 1.1 4511 chr3L 12957788 intergenic not near genes chr3L 12960044 intergenic not near genes chr3L 12962299 intergenic not near genes chr3L_9_12960001 chr3L_12960001 RAL-301_75b 1205 chr3L 13085054 13085086 chr3L 13085133 13085165 15 79 2.0 4.0 3.0 3.8 111 chr3L 13085054 intergenic not near genes chr3L 13085110 intergenic not near genes chr3L 13085165 intergenic not near genes chr3L_15_13085001 chr3L_13085001 RAL-301_75b 1206 chr3L 13090879 13090913 chr3L 13090990 13091024 16 111 1.5 10.0 5.8 2.4 145 chr3L 13090879 intergenic not near genes chr3L 13090952 intergenic not near genes chr3L 13091024 intergenic not near genes chr3L_16_13090001 chr3L_13090001 RAL-301_75b 1207 chr3L 13095820 13095835 chr3L 13095908 13095923 9 88 3.5 0.0 1.8 3.2 103 chr3L 13095820 intergenic not near genes chr3L 13095872 intergenic not near genes chr3L 13095923 intergenic not near genes chr3L_9_13095001 chr3L_13095001 RAL-301_75b 1208 chr3L 13174267 13174273 chr3L 13174359 13174365 7 92 3.0 10.0 6.5 0.9 98 chr3L 13174267 intergenic snky + chr3L 13174316 intergenic snky + chr3L 13174365 intergenic snky + chr3L_7_13170001 chr3L_13170001 RAL-301_75b 1209 chr3L 13194066 13194101 chr3L 13194145 13194180 7 79 3.5 2.5 3.0 1.8 114 chr3L 13194066 intergenic not near genes chr3L 13194123 intergenic not near genes chr3L 13194180 intergenic not near genes chr3L_7_13190001 chr3L_13190001 RAL-301_75b 1210 chr3L 13206246 13206258 chr3L 13206326 13206339 7 81 4.0 5.5 4.8 1.2 93 chr3L 13206246 intergenic not near genes chr3L 13206292 intergenic not near genes chr3L 13206339 intergenic not near genes chr3L_7_13205001 chr3L_13205001 RAL-301_75b 1211 chr3L 13223227 13223250 chr3L 13223303 13223326 4 76 0.0 5.5 2.8 1.1 99 chr3L 13223227 intergenic not near genes chr3L 13223276 intergenic not near genes chr3L 13223326 intergenic not near genes chr3L_4_13220001 chr3L_13220001 RAL-301_75b 1212 chr3L 13261822 13261836 chr3L 13261912 13261926 5 90 0.5 5.0 2.8 1.3 104 chr3L 13261822 intron caps + chr3L 13261874 intron caps + chr3L 13261926 intron caps + chr3L_5_13260001 chr3L_13260001 RAL-301_75b 1213 chr3L 13265183 13265217 chr3L 13265261 13265295 4 78 2.5 4.0 3.2 1.0 112 chr3L 13265183 5` UTR caps + chr3L 13265239 5` UTR caps + chr3L 13265295 5` UTR caps + chr3L_4_13265001 chr3L_13265001 RAL-301_75b 1214 chr3L 13311794 13311821 chr3L 13311872 13311899 11 78 3.5 3.0 3.2 2.6 105 chr3L 13311794 intergenic not near genes chr3L 13311846 intergenic not near genes chr3L 13311899 intergenic not near genes chr3L_11_13310001 chr3L_13310001 RAL-301_75b 1215 chr3L 13400531 13400544 chr3L 13400601 13400620 7 75 1.0 3.0 2.0 2.3 89 chr3L 13400531 intron sens - chr3L 13400576 intron sens - chr3L 13400620 intron sens - chr3L_7_13400001 chr3L_13400001 RAL-301_75b 1216 chr3L 13525156 13525190 chr3L 13532951 13532986 roo 11 7795 6.5 3.5 5.0 1.8 7830 chr3L 13525156 intergenic not near genes chr3L 13529071 intergenic not near genes chr3L 13532986 intergenic not near genes chr3L_11_13525001 chr3L_13525001 RAL-301_75b 1217 chr3L 13535908 13535929 chr3L 13535984 13536001 9 75 4.5 2.5 3.5 2.0 93 chr3L 13535908 intergenic not near genes chr3L 13535954 intergenic not near genes chr3L 13536001 intergenic not near genes chr3L_9_13535001 chr3L_13535001 RAL-301_75b 1218 chr3L 13629535 13629548 chr3L 13629640 13629658 10 110 1.0 4.0 2.5 2.9 123 chr3L 13629535 intron bru-3 - chr3L 13629596 intron bru-3 - chr3L 13629658 intron bru-3 - chr3L_10_13625001 chr3L_13625001 RAL-301_75b 1219 chr3L 13677533 13677561 chr3L 13677610 13677638 6 77 0.5 5.0 2.8 1.6 105 chr3L 13677533 intron bru-3 - chr3L 13677586 intron bru-3 - chr3L 13677638 intron bru-3 - chr3L_6_13675001 chr3L_13675001 RAL-301_75b 1220 chr3L 13692606 13692616 chr3L 13692683 13692693 6 76 0.5 2.5 1.5 2.4 87 chr3L 13692606 intron bru-3 - chr3L 13692650 intron bru-3 - chr3L 13692693 intron bru-3 - chr3L_6_13690001 chr3L_13690001 RAL-301_75b 1221 chr3L 13722463 13722468 chr3L 13722539 13722543 9 77 2.5 4.5 3.5 2.0 80 chr3L 13722463 intron bru-3 - chr3L 13722503 intron bru-3 - chr3L 13722543 intron bru-3 - chr3L_9_13720001 chr3L_13720001 RAL-301_75b 1222 chr3L 13752776 13752799 chr3L 13752873 13752896 5 96 3.5 4.0 3.8 1.0 120 chr3L 13752776 intron bru-3 - chr3L 13752836 intron bru-3 - chr3L 13752896 intron bru-3 - chr3L_5_13750001 chr3L_13750001 RAL-301_75b 1223 chr3L 13766905 13766920 chr3L 13767003 13767018 7 98 3.0 3.0 3.0 1.8 113 chr3L 13766905 intron bru-3 - chr3L 13766962 intron bru-3 - chr3L 13767018 intron bru-3 - chr3L_7_13765001 chr3L_13765001 RAL-301_75b 1224 chr3L 13804544 13804571 chr3L 13822830 13822857 roo 13 18286 5.0 3.0 4.0 2.6 18313 chr3L 13804544 intergenic not near genes chr3L 13813700 intergenic not near genes chr3L 13822857 intergenic not near genes chr3L_13_13810001 chr3L_13810001 RAL-301_75b 1225 chr3L 13862483 13862505 chr3L 13862684 13862712 12 206 0.0 5.0 2.5 3.4 229 chr3L 13862483 intron CG8745 - chr3L 13862598 intron CG8745 - chr3L 13862712 intron CG8745 - chr3L_12_13860001 chr3L_13860001 RAL-301_75b 1226 chr3L 13868166 13868179 chr3L 13868247 13868260 4 81 3.5 8.5 6.0 0.6 94 chr3L 13868166 3` UTR dysc - chr3L 13868213 3` UTR dysc - chr3L 13868260 3` UTR dysc - chr3L_4_13865001 chr3L_13865001 RAL-301_75b 1227 chr3L 13901572 13901600 chr3L 13901649 13901677 4 77 2.0 1.5 1.8 1.4 105 chr3L 13901572 intron dysc - chr3L 13901624 intron dysc - chr3L 13901677 intron dysc - chr3L_4_13900001 chr3L_13900001 RAL-301_75b 1228 chr3L 13957892 13957900 chr3L 13958085 13958093 5 192 5.5 5.5 5.5 0.8 201 chr3L 13957892 intron CG32137 + chr3L 13957992 intron CG32137 + chr3L 13958093 intron CG32137 + chr3L_5_13955001 chr3L_13955001 RAL-301_75b 1229 chr3L 14063050 14063073 chr3L 14063320 14063340 11 269 3.0 1.0 2.0 3.7 290 chr3L 14063050 intron CG32138 + chr3L 14063195 intron CG32138 + chr3L 14063340 intron CG32138 + chr3L_11_14060001 chr3L_14060001 RAL-301_75b 1230 chr3L 14175358 14175382 chr3L 14175506 14175530 11 148 0.5 4.0 2.2 3.4 172 chr3L 14175358 intergenic D - chr3L 14175444 intergenic D - chr3L 14175530 intergenic D - chr3L_11_14175001 chr3L_14175001 RAL-301_75b 1231 chr3L 14194728 14194742 chr3L 14194804 14194818 5 76 3.0 4.0 3.5 1.1 90 chr3L 14194728 intron nuf + chr3L 14194773 intron nuf + chr3L 14194818 intron nuf + chr3L_5_14190001 chr3L_14190001 RAL-301_75b 1232 chr3L 14211453 14211463 chr3L 14211531 14211541 10 78 3.0 4.0 3.5 2.2 88 chr3L 14211453 intron nuf + chr3L 14211497 intron nuf + chr3L 14211541 intron nuf + chr3L_10_14210001 chr3L_14210001 RAL-301_75b 1233 chr3L 14245573 14245593 chr3L 14245666 14245687 1360 4 93 1.5 2.0 1.8 1.4 114 chr3L 14245573 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245687 3` UTR CR44561 - chr3L_4_14245001 chr3L_14245001 RAL-301_75b 1234 chr3L 14356529 14356548 chr3L 14356608 14356628 11 80 3.0 4.0 3.5 2.4 99 chr3L 14356529 intron fz + chr3L 14356578 intron fz + chr3L 14356628 intron fz + chr3L_11_14355001 chr3L_14355001 RAL-301_75b 1235 chr3L 14429432 14429458 chr3L 14429508 14429534 15 76 5.0 2.0 3.5 3.3 102 chr3L 14429432 intron bbg - chr3L 14429483 intron bbg - chr3L 14429534 intron bbg - chr3L_15_14425001 chr3L_14425001 RAL-301_75b 1236 chr3L 14443639 14443650 chr3L 14443827 14443838 4 188 3.0 14.5 8.8 0.4 199 chr3L 14443639 intron bbg - chr3L 14443738 intron bbg - chr3L 14443838 intron bbg - chr3L_4_14440001 chr3L_14440001 RAL-301_75b 1237 chr3L 14462888 14462906 chr3L 14462976 14462993 7 88 0.0 1.5 0.8 3.9 105 chr3L 14462888 intron bbg - chr3L 14462940 intron bbg - chr3L 14462993 intron bbg - chr3L_7_14460001 chr3L_14460001 RAL-301_75b 1238 chr3L 14468448 14468467 chr3L 14473654 14473673 copia 6 5206 3.0 4.0 3.5 1.3 5225 chr3L 14468448 intron bbg - chr3L 14471060 intron bbg - chr3L 14473673 intron bbg - chr3L_6_14470001 chr3L_14470001 RAL-301_75b 1239 chr3L 14486025 14486049 chr3L 14486104 14486129 7 80 2.5 2.0 2.2 2.2 104 chr3L 14486025 intron bbg - chr3L 14486077 intron bbg - chr3L 14486129 intron bbg - chr3L_7_14485001 chr3L_14485001 RAL-301_75b 1240 chr3L 14514330 14514359 chr3L 14514573 14514602 10 242 4.0 3.0 3.5 2.2 272 chr3L 14514330 intron bbg - chr3L 14514466 intron bbg - chr3L 14514602 intron bbg - chr3L_10_14510001 chr3L_14510001 RAL-301_75b 1241 chr3L 14522073 14522083 chr3L 14522160 14522170 5 87 2.5 7.0 4.8 0.9 97 chr3L 14522073 intron bbg - chr3L 14522122 intron bbg - chr3L 14522170 intron bbg - chr3L_5_14520001 chr3L_14520001 RAL-301_75b 1242 chr3L 14596128 14596141 chr3L 14596208 14596221 4 80 0.0 1.0 0.5 2.7 93 chr3L 14596128 intron HGTX - chr3L 14596174 intron HGTX - chr3L 14596221 intron HGTX - chr3L_4_14595001 chr3L_14595001 RAL-301_75b 1243 chr3L 14633785 14633814 chr3L 14633881 14633910 7 95 3.0 2.0 2.5 2.0 125 chr3L 14633785 intron dlp + chr3L 14633848 intron dlp + chr3L 14633910 intron dlp + chr3L_7_14630001 chr3L_14630001 RAL-301_75b 1244 chr3L 14725602 14725628 chr3L 14728596 14728622 Doc 7 2994 2.5 5.5 4.0 1.4 3020 chr3L 14725602 intron ome + chr3L 14727112 intron ome + chr3L 14728622 intron ome + chr3L_7_14725001 chr3L_14725001 RAL-301_75b 1245 chr3L 14809187 14809220 chr3L 14809268 14809301 11 81 1.0 0.0 0.5 7.3 114 chr3L 14809187 intron CG17839 + chr3L 14809244 intron CG17839 + chr3L 14809301 intron CG17839 + chr3L_11_14805001 chr3L_14805001 RAL-301_75b 1246 chr3L 14866830 14866832 chr3L 14866920 14866923 6 90 1.0 4.5 2.8 1.6 93 chr3L 14866830 exon CG17839 + chr3L 14866876 intron CG17839 + chr3L 14866923 intron CG17839 + chr3L_6_14865001 chr3L_14865001 RAL-301_75b 1247 chr3L 14883307 14883339 chr3L 14883387 14883418 6 80 2.0 3.5 2.8 1.6 111 chr3L 14883307 intergenic not near genes chr3L 14883362 intergenic not near genes chr3L 14883418 intergenic not near genes chr3L_6_14880001 chr3L_14880001 RAL-301_75b 1248 chr3L 15085051 15085080 chr3L 15086217 15086246 1360 19 1166 3.0 3.0 3.0 4.8 1195 chr3L 15085051 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086246 intron cp309 - chr3L_19_15085001 chr3L_15085001 RAL-301_75b 1249 chr3L 15103310 15103336 chr3L 15103577 15103604 9 267 0.0 5.5 2.8 2.4 294 chr3L 15103310 intron CTPsyn + chr3L 15103457 intron CTPsyn + chr3L 15103604 intron CTPsyn + chr3L_9_15100001 chr3L_15100001 RAL-301_75b 1250 chr3L 15165034 15165047 chr3L 15165133 15165145 4 99 0.0 0.0 0.0 4.0 111 chr3L 15165034 intergenic not near genes chr3L 15165090 intergenic not near genes chr3L 15165145 intergenic not near genes chr3L_4_15165001 chr3L_15165001 RAL-301_75b 1251 chr3L 15231388 15231421 chr3L 15231480 15231514 19 92 0.0 0.5 0.2 15.8 126 chr3L 15231388 intergenic not near genes chr3L 15231451 intergenic not near genes chr3L 15231514 intergenic not near genes chr3L_19_15230001 chr3L_15230001 RAL-301_75b 1252 chr3L 15261723 15261725 chr3L 22908066 22908067 8 7646343 2.5 16.5 9.5 0.8 7646344 chr3L 15261723 intergenic not near genes chr3L 19084895 intron Mkp3 - chr3L 22908067 intergenic not near genes chr3L_8_19080001 chr3L_19080001 RAL-301_75b 1253 chr3L 15282716 15282744 chr3L 15282846 15282874 12 130 1.0 1.0 1.0 6.0 158 chr3L 15282716 intergenic not near genes chr3L 15282795 intergenic not near genes chr3L 15282874 intergenic not near genes chr3L_12_15280001 chr3L_15280001 RAL-301_75b 1254 chr3L 15284566 15284596 chr3L 15284645 15284675 8 78 1.5 4.5 3.0 2.0 109 chr3L 15284566 intergenic not near genes chr3L 15284620 intergenic not near genes chr3L 15284675 intergenic not near genes chr3L_8_15280001 chr3L_15280001 RAL-301_75b 1255 chr3L 15295770 15295780 chr3L 15298613 15298620 gypsy5 5 2842 4.5 5.5 5.0 0.8 2850 chr3L 15295770 intergenic not near genes chr3L 15297195 intergenic not near genes chr3L 15298620 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 RAL-301_75b 1256 chr3L 15333139 15333166 chr3L 15333219 15333248 5 80 0.0 4.5 2.2 1.6 109 chr3L 15333139 intergenic CR43247 + chr3L 15333194 intergenic CR43247 + chr3L 15333248 intergenic CR43247 + chr3L_5_15330001 chr3L_15330001 RAL-301_75b 1257 chr3L 15348114 15348140 chr3L 15348272 15348298 4 157 2.0 5.0 3.5 0.9 184 chr3L 15348114 intergenic not near genes chr3L 15348206 intergenic not near genes chr3L 15348298 intergenic not near genes chr3L_4_15345001 chr3L_15345001 RAL-301_75b 1258 chr3L 15358360 15358394 chr3L 15358491 15358525 18 131 2.5 3.5 3.0 4.5 165 chr3L 15358360 intergenic not near genes chr3L 15358442 intergenic not near genes chr3L 15358525 intergenic not near genes chr3L_18_15355001 chr3L_15355001 RAL-301_75b 1259 chr3L 15423759 15423784 chr3L 15426603 15426628 opus 8 2844 2.5 2.0 2.2 2.5 2869 chr3L 15423759 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426628 intergenic not near genes chr3L_8_15425001 chr3L_15425001 RAL-301_75b 1260 chr3L 15482316 15482344 chr3L 15482418 15482446 9 102 2.0 2.0 2.0 3.0 130 chr3L 15482316 intergenic not near genes chr3L 15482381 intergenic not near genes chr3L 15482446 intergenic not near genes chr3L_9_15480001 chr3L_15480001 RAL-301_75b 1261 chr3L 15483303 15483317 chr3L 15483430 15483445 10 128 5.0 4.0 4.5 1.8 142 chr3L 15483303 intergenic not near genes chr3L 15483374 intergenic not near genes chr3L 15483445 intergenic not near genes chr3L_10_15480001 chr3L_15480001 RAL-301_75b 1262 chr3L 15541617 15541648 chr3L 15541708 15541739 6 91 2.0 2.5 2.2 1.9 122 chr3L 15541617 intron CrebA + chr3L 15541678 intron CrebA + chr3L 15541739 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-301_75b 1263 chr3L 15550665 15550693 chr3L 15554108 15554136 10 3443 21.5 21.0 21.2 0.5 3471 chr3L 15550665 intron CrebA + chr3L 15552400 3` UTR CrebA + chr3L 15554136 5` UTR AGO2 + chr3L_10_15550001 chr3L_15550001 RAL-301_75b 1264 chr3L 15554924 15554951 chr3L 15556711 15556738 S-element 14 1787 2.0 6.0 4.0 2.8 1814 chr3L 15554924 intron AGO2 + chr3L 15555831 intron AGO2 + chr3L 15556738 intron AGO2 + chr3L_14_15555001 chr3L_15555001 RAL-301_75b 1265 chr3L 15633187 15633198 chr3L 15633267 15633278 8 79 3.0 0.0 1.5 3.2 91 chr3L 15633187 intron comm3 - chr3L 15633232 intron comm3 - chr3L 15633278 intron comm3 - chr3L_8_15630001 chr3L_15630001 RAL-301_75b 1266 chr3L 15744583 15744591 chr3L 15745057 15745065 6 475 9.5 23.5 16.5 0.3 482 chr3L 15744583 intergenic not near genes chr3L 15744824 intergenic not near genes chr3L 15745065 intergenic not near genes chr3L_6_15740001 chr3L_15740001 RAL-301_75b 1267 chr3L 15770227 15770243 chr3L 15770314 15770330 11 86 6.0 0.0 3.0 2.8 103 chr3L 15770227 intergenic not near genes chr3L 15770278 intergenic not near genes chr3L 15770330 intergenic not near genes chr3L_11_15770001 chr3L_15770001 RAL-301_75b 1268 chr3L 15840433 15840438 chr3L 15840521 15840524 4 88 7.5 0.5 4.0 0.8 91 chr3L 15840433 intron CG32150 - chr3L 15840478 intron CG32150 - chr3L 15840524 intron CG32150 - chr3L_4_15840001 chr3L_15840001 RAL-301_75b 1269 chr3L 15871592 15871616 chr3L 15871676 15871700 8 84 1.5 0.0 0.8 4.4 108 chr3L 15871592 intron pHCl - chr3L 15871646 intron pHCl - chr3L 15871700 intron pHCl - chr3L_8_15870001 chr3L_15870001 RAL-301_75b 1270 chr3L 15896098 15896118 chr3L 15896183 15896207 4 88 1.0 3.5 2.2 1.2 109 chr3L 15896098 intron pHCl - chr3L 15896152 intron pHCl - chr3L 15896207 intron pHCl - chr3L_4_15895001 chr3L_15895001 RAL-301_75b 1271 chr3L 15929200 15929227 chr3L 15938347 15938374 roo 9 9147 3.0 3.0 3.0 2.2 9174 chr3L 15929200 intron Pka-C3 - chr3L 15933787 intron Pka-C3 - chr3L 15938374 intron Pka-C3 - chr3L_9_15930001 chr3L_15930001 RAL-301_75b 1272 chr3L 15939854 15939881 chr3L 15939930 15939957 12 75 3.0 5.0 4.0 2.4 103 chr3L 15939854 intron Pka-C3 - chr3L 15939906 intron Pka-C3 - chr3L 15939957 intron Pka-C3 - chr3L_12_15935001 chr3L_15935001 RAL-301_75b 1273 chr3L 16066181 16066181 chr3L 26882300 26882300 6 10816119 4.0 2.0 3.0 1.5 10816119 chr3L 16066181 intron Mbs + chr3L 21474240 3` UTR croc - chr3L 26882300 intergenic not near genes chr3L_6_21470001 chr3L_21470001 RAL-301_75b 1274 chr3L 16149201 16149234 chr3L 16149290 16149323 6 88 2.5 0.5 1.5 2.4 122 chr3L 16149201 intron CG5151 - chr3L 16149262 intron CG5151 - chr3L 16149323 intron CG5151 - chr3L_6_16145001 chr3L_16145001 RAL-301_75b 1275 chr3L 16158803 16158837 chr3L 16158888 16158920 9 84 3.0 3.0 3.0 2.2 117 chr3L 16158803 intron CG5151 - chr3L 16158862 intron CG5151 - chr3L 16158920 intron CG5151 - chr3L_9_16155001 chr3L_16155001 RAL-301_75b 1276 chr3L 16184107 16184140 chr3L 16188926 16188958 X-element 10 4819 3.0 2.5 2.8 2.6 4851 chr3L 16184107 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188958 intergenic not near genes chr3L_10_16185001 chr3L_16185001 RAL-301_75b 1277 chr3L 16194348 16194366 chr3L 16194438 16194455 5 90 1.5 5.0 3.2 1.2 107 chr3L 16194348 intergenic not near genes chr3L 16194402 intergenic not near genes chr3L 16194455 intergenic not near genes chr3L_5_16190001 chr3L_16190001 RAL-301_75b 1278 chr3L 16198384 16198416 chr3L 16198469 16198501 14 84 2.0 1.0 1.5 5.6 117 chr3L 16198384 intron CG33687 + chr3L 16198442 exon CG33687 + chr3L 16198501 exon CG33687 + chr3L_14_16195001 chr3L_16195001 RAL-301_75b 1279 chr3L 16212826 16212832 chr3L 16212917 16212921 7 90 0.5 1.0 0.8 3.9 95 chr3L 16212826 intergenic CG13073 - chr3L 16212874 intergenic CG13073 - chr3L 16212921 intergenic CG13073 - chr3L_7_16210001 chr3L_16210001 RAL-301_75b 1280 chr3L 16236346 16236366 chr3L 16236461 16236481 4 115 3.5 4.5 4.0 0.8 135 chr3L 16236346 3` UTR l(3)72Dp + chr3L 16236414 3` UTR l(3)72Dp + chr3L 16236481 3` UTR l(3)72Dp + chr3L_4_16235001 chr3L_16235001 RAL-301_75b 1281 chr3L 16279087 16279105 chr3L 16279168 16279186 5 81 1.5 1.5 1.5 2.0 99 chr3L 16279087 intron CG13050 - chr3L 16279136 intron CG13050 - chr3L 16279186 intron CG13050 - chr3L_5_16275001 chr3L_16275001 RAL-301_75b 1282 chr3L 16334199 16334215 chr3L 16334279 16334298 9 82 4.5 2.0 3.2 2.1 99 chr3L 16334199 intergenic CG13056 + chr3L 16334248 intergenic CG13056 + chr3L 16334298 intergenic not near genes chr3L_9_16330001 chr3L_16330001 RAL-301_75b 1283 chr3L 16340265 16340290 chr3L 16340389 16340414 5 124 4.0 4.0 4.0 1.0 149 chr3L 16340265 intron CG4998 + chr3L 16340340 intron CG4998 + chr3L 16340414 intron CG4998 + chr3L_5_16340001 chr3L_16340001 RAL-301_75b 1284 chr3L 16360887 16360911 chr3L 16360963 16360989 14 77 4.0 3.0 3.5 3.1 102 chr3L 16360887 intron CG45057 - chr3L 16360938 intron CG45057 - chr3L 16360989 intron CG45057 - chr3L_14_16360001 chr3L_16360001 RAL-301_75b 1285 chr3L 16457532 16457554 chr3L 16457626 16457649 7 95 1.0 3.0 2.0 2.3 117 chr3L 16457532 intron CG33158 + chr3L 16457590 intron CG33158 + chr3L 16457649 intron CG33158 + chr3L_7_16455001 chr3L_16455001 RAL-301_75b 1286 chr3L 16493974 16493990 chr3L 16494491 16494507 jockey 7 517 6.5 1.5 4.0 1.4 533 chr3L 16493974 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494240 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494507 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_7_16490001 chr3L_16490001 RAL-301_75b 1287 chr3L 16533578 16533587 chr3L 16533689 16533698 4 110 1.0 7.0 4.0 0.8 120 chr3L 16533578 intron CG43373 - chr3L 16533638 intron CG43373 - chr3L 16533698 intron CG43373 - chr3L_4_16530001 chr3L_16530001 RAL-301_75b 1288 chr3L 16537853 16537876 chr3L 16537940 16537962 13 87 5.5 10.5 8.0 1.4 109 chr3L 16537853 intron CG43373 - chr3L 16537908 intron CG43373 - chr3L 16537962 intron CG43373 - chr3L_13_16535001 chr3L_16535001 RAL-301_75b 1289 chr3L 16540054 16540084 chr3L 16540142 16540172 14 88 2.0 3.5 2.8 3.7 118 chr3L 16540054 intron CG43373 - chr3L 16540113 intron CG43373 - chr3L 16540172 intron CG43373 - chr3L_14_16540001 chr3L_16540001 RAL-301_75b 1290 chr3L 16574261 16574290 chr3L 16574349 16574378 10 88 3.0 1.0 2.0 3.3 117 chr3L 16574261 intergenic mbf1 + chr3L 16574320 intergenic mbf1 + chr3L 16574378 intergenic mbf1 + chr3L_10_16570001 chr3L_16570001 RAL-301_75b 1291 chr3L 16616513 16616515 chr3L 16621841 16621843 297 5 5328 8.0 6.0 7.0 0.6 5330 chr3L 16616513 3` UTR Abl - chr3L 16619178 3` UTR Abl - chr3L 16621843 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-301_75b 1292 chr3L 16638774 16638800 chr3L 16638854 16638880 5 80 1.5 1.5 1.5 2.0 106 chr3L 16638774 intron Abl - chr3L 16638827 intron Abl - chr3L 16638880 intron Abl - chr3L_5_16635001 chr3L_16635001 RAL-301_75b 1293 chr3L 16643346 16643362 chr3L 16643424 16643440 10 78 1.5 2.5 2.0 3.3 94 chr3L 16643346 intron Abl - chr3L 16643393 intron Abl - chr3L 16643440 intron Abl - chr3L_10_16640001 chr3L_16640001 RAL-301_75b 1294 chr3L 16659104 16659128 chr3L 16659182 16659205 8 78 5.5 1.0 3.2 1.9 101 chr3L 16659104 intron Baldspot - chr3L 16659154 intron Baldspot - chr3L 16659205 intron Baldspot - chr3L_8_16655001 chr3L_16655001 RAL-301_75b 1295 chr3L 16786985 16787003 chr3L 16787061 16787079 6 76 0.0 9.5 4.8 1.0 94 chr3L 16786985 intergenic Int6 - chr3L 16787032 intergenic Int6 - chr3L 16787079 intergenic Int6 -,CG9674 - chr3L_6_16785001 chr3L_16785001 RAL-301_75b 1296 chr3L 16808040 16808071 chr3L 16808116 16808147 11 75 3.0 0.0 1.5 4.4 107 chr3L 16808040 intron nudC + chr3L 16808094 intron nudC + chr3L 16808147 intron nudC + chr3L_11_16805001 chr3L_16805001 RAL-301_75b 1297 chr3L 16818747 16818780 chr3L 16818823 16818856 24 75 4.0 3.0 3.5 5.3 109 chr3L 16818747 intron,intron nudC +,CG13024 - chr3L 16818802 intron,intron nudC +,CG13024 - chr3L 16818856 intron,intron nudC +,CG13024 - chr3L_24_16815001 chr3L_16815001 RAL-301_75b 1298 chr3L 16831727 16831750 chr3L 16838462 16838488 8 6736 17.5 19.5 18.5 0.4 6761 chr3L 16831727 intergenic not near genes chr3L 16835108 intergenic not near genes chr3L 16838488 intergenic not near genes chr3L_8_16835001 chr3L_16835001 RAL-301_75b 1299 chr3L 16845025 16845036 chr3L 16845138 16845148 7 113 2.0 6.0 4.0 1.4 123 chr3L 16845025 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845086 intergenic CG9669 -,CG9715 + chr3L 16845148 intergenic CG9669 -,CG9715 + chr3L_7_16845001 chr3L_16845001 RAL-301_75b 1300 chr3L 16869578 16869598 chr3L 16869661 16869681 7 83 4.0 3.0 3.5 1.6 103 chr3L 16869578 intron Lmpt + chr3L 16869630 intron Lmpt + chr3L 16869681 intron Lmpt + chr3L_7_16865001 chr3L_16865001 RAL-301_75b 1301 chr3L 16945726 16945761 chr3L 16954878 16954913 roo 13 9153 6.5 8.0 7.2 1.6 9187 chr3L 16945726 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954913 5` UTR Nc73EF + chr3L_13_16950001 chr3L_16950001 RAL-301_75b 1302 chr3L 17027167 17027186 chr3L 17027259 17027278 6 92 1.0 1.0 1.0 3.0 111 chr3L 17027167 intergenic Fit2 +,CG7730 + chr3L 17027222 intergenic Fit2 +,CG7730 + chr3L 17027278 intergenic Fit2 +,CG7730 + chr3L_6_17025001 chr3L_17025001 RAL-301_75b 1303 chr3L 17034932 17034961 chr3L 17035120 17035149 G2 5 188 0.5 1.0 0.8 2.8 217 chr3L 17034932 intergenic not near genes chr3L 17035040 intergenic not near genes chr3L 17035149 intergenic not near genes chr3L_5_17035001 chr3L_17035001 RAL-301_75b 1304 chr3L 17050010 17050036 chr3L 17050099 17050127 9 91 2.0 2.5 2.2 2.8 117 chr3L 17050010 intron rogdi + chr3L 17050068 intron rogdi + chr3L 17050127 intron rogdi + chr3L_9_17050001 chr3L_17050001 RAL-301_75b 1305 chr3L 17085002 17085035 chr3L 17094151 17094184 roo 12 9149 3.5 6.5 5.0 2.0 9182 chr3L 17085002 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094184 intron Rbp6 - chr3L_12_17085001 chr3L_17085001 RAL-301_75b 1306 chr3L 17194532 17194559 chr3L 17194633 17194660 8 100 2.5 4.0 3.2 1.9 128 chr3L 17194532 intron Rbp6 - chr3L 17194596 intron Rbp6 - chr3L 17194660 intron Rbp6 - chr3L_8_17190001 chr3L_17190001 RAL-301_75b 1307 chr3L 17263180 17263188 chr3L 17263327 17263335 4 146 2.0 1.0 1.5 1.6 155 chr3L 17263180 intron CR43870 + chr3L 17263258 intron CR43870 + chr3L 17263335 intron CR43870 + chr3L_4_17260001 chr3L_17260001 RAL-301_75b 1308 chr3L 17272242 17272255 chr3L 17272375 17272387 6 132 2.5 0.5 1.5 2.4 145 chr3L 17272242 intergenic not near genes chr3L 17272314 intergenic not near genes chr3L 17272387 intergenic not near genes chr3L_6_17270001 chr3L_17270001 RAL-301_75b 1309 chr3L 17310086 17310090 chr3L 17310175 17310179 9 88 1.0 5.5 3.2 2.1 93 chr3L 17310086 intergenic not near genes chr3L 17310132 intergenic not near genes chr3L 17310179 intergenic not near genes chr3L_9_17310001 chr3L_17310001 RAL-301_75b 1310 chr3L 17331064 17331087 chr3L 17331154 17331177 11 90 2.5 2.5 2.5 3.1 113 chr3L 17331064 intergenic not near genes chr3L 17331120 intergenic not near genes chr3L 17331177 intergenic not near genes chr3L_11_17330001 chr3L_17330001 RAL-301_75b 1311 chr3L 17367437 17367457 chr3L 17367530 17367551 17 94 5.0 4.0 4.5 3.1 114 chr3L 17367437 intergenic CR45688 +,Cad74A - chr3L 17367494 intergenic CR45688 +,Cad74A - chr3L 17367551 intergenic CR45688 +,Cad74A - chr3L_17_17365001 chr3L_17365001 RAL-301_75b 1312 chr3L 17400151 17400181 chr3L 17400233 17400263 5 82 2.5 1.5 2.0 1.7 112 chr3L 17400151 intron blot - chr3L 17400207 intron blot - chr3L 17400263 intron blot - chr3L_5_17400001 chr3L_17400001 RAL-301_75b 1313 chr3L 17403680 17403707 chr3L 17403765 17403792 11 85 5.0 3.0 4.0 2.2 112 chr3L 17403680 intron blot - chr3L 17403736 intron blot - chr3L 17403792 intron blot - chr3L_11_17400001 chr3L_17400001 RAL-301_75b 1314 chr3L 17408919 17408924 chr3L 17408994 17408999 6 76 4.5 9.0 6.8 0.8 80 chr3L 17408919 intron blot - chr3L 17408959 intron blot - chr3L 17408999 intron blot - chr3L_6_17405001 chr3L_17405001 RAL-301_75b 1315 chr3L 17431311 17431326 chr3L 17431395 17431410 5 85 4.5 5.5 5.0 0.8 99 chr3L 17431311 intron,3` UTR CG32174 -,frc - chr3L 17431360 intron,3` UTR CG32174 -,frc - chr3L 17431410 intron,3` UTR CG32174 -,frc - chr3L_5_17430001 chr3L_17430001 RAL-301_75b 1316 chr3L 17516985 17517013 chr3L 17524543 17524571 412 12 7558 0.5 6.0 3.2 2.9 7586 chr3L 17516985 intron CG7564 + chr3L 17520778 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_12_17520001 chr3L_17520001 RAL-301_75b 1317 chr3L 17585336 17585341 chr3L 17585661 17585666 7 325 13.0 29.5 21.2 0.3 330 chr3L 17585336 intron Eip74EF - chr3L 17585501 intron Eip74EF - chr3L 17585666 intron Eip74EF - chr3L_7_17585001 chr3L_17585001 RAL-301_75b 1318 chr3L 17592787 17592817 chr3L 17592878 17592908 15 91 1.5 6.5 4.0 3.0 121 chr3L 17592787 intron Eip74EF - chr3L 17592848 intron Eip74EF - chr3L 17592908 intron Eip74EF - chr3L_15_17590001 chr3L_17590001 RAL-301_75b 1319 chr3L 17612215 17612235 chr3L 17612298 17612320 5 85 5.0 8.5 6.8 0.6 105 chr3L 17612215 intron Eip74EF - chr3L 17612268 intron Eip74EF - chr3L 17612320 intron Eip74EF - chr3L_5_17610001 chr3L_17610001 RAL-301_75b 1320 chr3L 17730852 17730881 chr3L 17738182 17738211 mdg1 11 7330 5.0 4.5 4.8 1.9 7359 chr3L 17730852 intron Ccn + chr3L 17734532 intron Ccn + chr3L 17738211 intron Ccn + chr3L_11_17730001 chr3L_17730001 RAL-301_75b 1321 chr3L 17784828 17784837 chr3L 17784909 17784918 4 80 0.0 7.0 3.5 0.9 90 chr3L 17784828 3` UTR CR44668 - chr3L 17784873 3` UTR CR44668 - chr3L 17784918 3` UTR CR44668 - chr3L_4_17780001 chr3L_17780001 RAL-301_75b 1322 chr3L 17790603 17790630 chr3L 17790868 17790895 7 265 1.0 3.5 2.2 2.2 292 chr3L 17790603 intergenic CG42815 - chr3L 17790749 intergenic CG42815 - chr3L 17790895 intergenic CG42815 - chr3L_7_17790001 chr3L_17790001 RAL-301_75b 1323 chr3L 17799818 17799839 chr3L 17801605 17801626 S-element 4 1787 1.5 5.0 3.2 1.0 1808 chr3L 17799818 intron NUCB1 - chr3L 17800722 intron NUCB1 - chr3L 17801626 intron NUCB1 - chr3L_4_17800001 chr3L_17800001 RAL-301_75b 1324 chr3L 17836214 17836233 chr3L 17836291 17836310 13 77 0.5 5.0 2.8 3.4 96 chr3L 17836214 intron Grd + chr3L 17836262 intron Grd + chr3L 17836310 intron Grd + chr3L_13_17835001 chr3L_17835001 RAL-301_75b 1325 chr3L 17896613 17896636 chr3L 17896690 17896713 17 77 2.5 4.5 3.5 3.8 100 chr3L 17896613 intergenic not near genes chr3L 17896663 intergenic not near genes chr3L 17896713 intergenic not near genes chr3L_17_17895001 chr3L_17895001 RAL-301_75b 1326 chr3L 17918384 17918401 chr3L 17921187 17921204 opus 4 2803 2.5 1.5 2.0 1.3 2820 chr3L 17918384 intergenic not near genes chr3L 17919794 intergenic not near genes chr3L 17921204 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-301_75b 1327 chr3L 18006221 18006251 chr3L 18006345 18006375 14 124 3.0 1.5 2.2 4.4 154 chr3L 18006221 intron Eip75B - chr3L 18006298 intron Eip75B - chr3L 18006375 intron Eip75B - chr3L_14_18005001 chr3L_18005001 RAL-301_75b 1328 chr3L 18013976 18013983 chr3L 18014065 18014072 4 89 0.5 0.0 0.2 3.3 96 chr3L 18013976 intron Eip75B - chr3L 18014024 intron Eip75B - chr3L 18014072 intron Eip75B - chr3L_4_18010001 chr3L_18010001 RAL-301_75b 1329 chr3L 18028251 18028279 chr3L 18028457 18028484 12 206 0.5 7.0 3.8 2.5 233 chr3L 18028251 intron Eip75B - chr3L 18028368 intron Eip75B - chr3L 18028484 intron Eip75B - chr3L_12_18025001 chr3L_18025001 RAL-301_75b 1330 chr3L 18029964 18029980 chr3L 18030041 18030057 6 77 1.0 0.0 0.5 4.0 93 chr3L 18029964 intron Eip75B - chr3L 18030010 intron Eip75B - chr3L 18030057 intron Eip75B - chr3L_6_18030001 chr3L_18030001 RAL-301_75b 1331 chr3L 18034698 18034707 chr3L 18034781 18034789 8 83 2.0 8.5 5.2 1.3 91 chr3L 18034698 intron Eip75B - chr3L 18034744 intron Eip75B - chr3L 18034789 intron Eip75B - chr3L_8_18030001 chr3L_18030001 RAL-301_75b 1332 chr3L 18047714 18047727 chr3L 18056770 18056783 roo 5 9056 6.5 2.0 4.2 1.0 9069 chr3L 18047714 intron Eip75B - chr3L 18052248 intron Eip75B - chr3L 18056783 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-301_75b 1333 chr3L 18093967 18093994 chr3L 18094089 18094115 13 122 2.5 3.0 2.8 3.4 148 chr3L 18093967 intron CG13698 - chr3L 18094041 intron CG13698 - chr3L 18094115 intron CG13698 - chr3L_13_18090001 chr3L_18090001 RAL-301_75b 1334 chr3L 18118214 18118238 chr3L 18118292 18118314 7 77 0.5 2.5 1.5 2.8 100 chr3L 18118214 3` UTR,intron CG32195 +,CG7341 + chr3L 18118264 3` UTR,intron CG32195 +,CG7341 + chr3L 18118314 3` UTR,intron CG32195 +,CG7341 + chr3L_7_18115001 chr3L_18115001 RAL-301_75b 1335 chr3L 18133021 18133044 chr3L 18133111 18133134 9 90 3.5 1.5 2.5 2.6 113 chr3L 18133021 intergenic Cyp312a1 - chr3L 18133078 intergenic Cyp312a1 - chr3L 18133134 intergenic Cyp312a1 - chr3L_9_18130001 chr3L_18130001 RAL-301_75b 1336 chr3L 18175816 18175835 chr3L 18176055 18176074 6 239 2.5 2.5 2.5 1.7 258 chr3L 18175816 intron W - chr3L 18175945 intron W - chr3L 18176074 intron W - chr3L_6_18175001 chr3L_18175001 RAL-301_75b 1337 chr3L 18248961 18248971 chr3L 18249059 18249069 5 98 0.5 8.5 4.5 0.9 108 chr3L 18248961 intergenic not near genes chr3L 18249015 intergenic not near genes chr3L 18249069 intergenic not near genes chr3L_5_18245001 chr3L_18245001 RAL-301_75b 1338 chr3L 18295588 18295602 chr3L 18295667 18295681 7 79 2.5 5.5 4.0 1.4 93 chr3L 18295588 intron CR43306 + chr3L 18295634 5` UTR CR43306 + chr3L 18295681 5` UTR CR43306 + chr3L_7_18295001 chr3L_18295001 RAL-301_75b 1339 chr3L 18306887 18306903 chr3L 18306964 18306980 8 77 2.0 3.0 2.5 2.3 93 chr3L 18306887 intergenic not near genes chr3L 18306934 intergenic not near genes chr3L 18306980 intergenic not near genes chr3L_8_18305001 chr3L_18305001 RAL-301_75b 1340 chr3L 18326790 18326818 chr3L 18326908 18326936 18 117 1.5 1.0 1.2 8.2 146 chr3L 18326790 intergenic not near genes chr3L 18326863 intergenic not near genes chr3L 18326936 intergenic not near genes chr3L_18_18325001 chr3L_18325001 RAL-301_75b 1341 chr3L 18343396 18343425 chr3L 18343475 18343504 4 79 1.0 1.0 1.0 2.0 108 chr3L 18343396 intergenic not near genes chr3L 18343450 intergenic not near genes chr3L 18343504 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-301_75b 1342 chr3L 18383112 18383131 chr3L 18383194 18383213 5 82 0.0 5.0 2.5 1.4 101 chr3L 18383112 intergenic not near genes chr3L 18383162 intergenic not near genes chr3L 18383213 intergenic not near genes chr3L_5_18380001 chr3L_18380001 RAL-301_75b 1343 chr3L 18408731 18408756 chr3L 18408817 18408842 12 86 2.5 1.0 1.8 4.3 111 chr3L 18408731 intergenic not near genes chr3L 18408786 intergenic not near genes chr3L 18408842 intergenic not near genes chr3L_12_18405001 chr3L_18405001 RAL-301_75b 1344 chr3L 18436063 18436095 chr3L 18436161 18436192 10 98 1.0 2.5 1.8 3.6 129 chr3L 18436063 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436192 intergenic not near genes chr3L_10_18435001 chr3L_18435001 RAL-301_75b 1345 chr3L 18456279 18456303 chr3L 18456367 18456391 6 88 0.0 3.5 1.8 2.1 112 chr3L 18456279 intergenic CR44670 - chr3L 18456335 intergenic CR44670 - chr3L 18456391 intergenic CR44670 - chr3L_6_18455001 chr3L_18455001 RAL-301_75b 1346 chr3L 18464486 18464513 chr3L 18464572 18464599 10 86 2.5 3.0 2.8 2.6 113 chr3L 18464486 intergenic not near genes chr3L 18464542 intergenic not near genes chr3L 18464599 intergenic not near genes chr3L_10_18460001 chr3L_18460001 RAL-301_75b 1347 chr3L 18506132 18506155 chr3L 18509595 18509618 F-element 11 3462 4.0 1.0 2.5 3.1 3486 chr3L 18506132 intergenic not near genes chr3L 18507875 intergenic not near genes chr3L 18509618 intergenic not near genes chr3L_11_18505001 chr3L_18505001 RAL-301_75b 1348 chr3L 18528630 18528651 chr3L 18537791 18537811 roo 10 9161 4.0 6.5 5.2 1.6 9181 chr3L 18528630 intergenic not near genes chr3L 18533220 intergenic not near genes chr3L 18537811 intergenic not near genes chr3L_10_18530001 chr3L_18530001 RAL-301_75b 1349 chr3L 18546707 18546731 chr3L 18546801 18546824 8 93 1.5 3.5 2.5 2.3 117 chr3L 18546707 intergenic not near genes chr3L 18546766 intergenic not near genes chr3L 18546824 intergenic not near genes chr3L_8_18545001 chr3L_18545001 RAL-301_75b 1350 chr3L 18593954 18593975 chr3L 18595934 18595955 Doc 6 1980 1.5 3.0 2.2 1.9 2001 chr3L 18593954 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18595955 intergenic CR45389 + chr3L_6_18590001 chr3L_18590001 RAL-301_75b 1351 chr3L 18638576 18638609 chr3L 18638670 18638702 11 94 1.5 1.0 1.2 5.0 126 chr3L 18638576 intron MYPT-75D + chr3L 18638639 intron MYPT-75D + chr3L 18638702 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 RAL-301_75b 1352 chr3L 18653053 18653068 chr3L 18653174 18653189 5 121 0.0 3.0 1.5 2.0 136 chr3L 18653053 intron MYPT-75D + chr3L 18653121 intron MYPT-75D + chr3L 18653189 intron MYPT-75D + chr3L_5_18650001 chr3L_18650001 RAL-301_75b 1353 chr3L 18701130 18701158 chr3L 18701218 18701246 12 88 4.0 0.0 2.0 4.0 116 chr3L 18701130 intergenic not near genes chr3L 18701188 intergenic not near genes chr3L 18701246 intergenic not near genes chr3L_12_18700001 chr3L_18700001 RAL-301_75b 1354 chr3L 18721780 18721803 chr3L 18721871 18721894 6 91 2.5 3.5 3.0 1.5 114 chr3L 18721780 intergenic CG12477 - chr3L 18721837 intergenic CG12477 - chr3L 18721894 3` UTR CG12477 - chr3L_6_18720001 chr3L_18720001 RAL-301_75b 1355 chr3L 18738674 18738698 chr3L 18738762 18738785 8 88 1.5 8.5 5.0 1.3 111 chr3L 18738674 intergenic not near genes chr3L 18738730 intergenic not near genes chr3L 18738785 intergenic not near genes chr3L_8_18735001 chr3L_18735001 RAL-301_75b 1356 chr3L 18739372 18739398 chr3L 18739471 18739497 4 99 3.5 5.0 4.2 0.8 125 chr3L 18739372 intergenic not near genes chr3L 18739434 intergenic not near genes chr3L 18739497 intergenic not near genes chr3L_4_18735001 chr3L_18735001 RAL-301_75b 1357 chr3L 18753556 18753560 chr3L 18753638 18753642 4 82 0.5 3.5 2.0 1.3 86 chr3L 18753556 intron ftz-f1 - chr3L 18753599 intron ftz-f1 - chr3L 18753642 intron ftz-f1 - chr3L_4_18750001 chr3L_18750001 RAL-301_75b 1358 chr3L 18772417 18772442 chr3L 18781098 18781123 roo 9 8680 1.0 4.0 2.5 2.6 8706 chr3L 18772417 intron ftz-f1 - chr3L 18776770 intron ftz-f1 - chr3L 18781123 intron ftz-f1 - chr3L_9_18775001 chr3L_18775001 RAL-301_75b 1359 chr3L 18784397 18784402 chr3L 18784486 18784491 6 89 0.0 5.0 2.5 1.7 94 chr3L 18784397 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784491 intron ftz-f1 - chr3L_6_18780001 chr3L_18780001 RAL-301_75b 1360 chr3L 18810147 18810178 chr3L 18810224 18810260 9 79 4.0 0.0 2.0 3.0 113 chr3L 18810147 intron CG14073 - chr3L 18810204 intron CG14073 - chr3L 18810260 intron CG14073 - chr3L_9_18810001 chr3L_18810001 RAL-301_75b 1361 chr3L 18833783 18833808 chr3L 18834947 18834972 1360 10 1163 5.0 3.0 4.0 2.0 1189 chr3L 18833783 intron Indy - chr3L 18834378 intron Indy - chr3L 18834972 intron Indy - chr3L_10_18830001 chr3L_18830001 RAL-301_75b 1362 chr3L 18838548 18838557 chr3L 18838628 18838637 5 80 0.0 1.5 0.8 2.8 89 chr3L 18838548 intron Indy - chr3L 18838592 intron Indy - chr3L 18838637 intron Indy - chr3L_5_18835001 chr3L_18835001 RAL-301_75b 1363 chr3L 18839744 18839768 chr3L 18839827 18839851 9 83 5.0 0.5 2.8 2.4 107 chr3L 18839744 intron Indy - chr3L 18839798 intron Indy - chr3L 18839851 intron Indy - chr3L_9_18835001 chr3L_18835001 RAL-301_75b 1364 chr3L 18856582 18856607 chr3L 18856686 18856711 8 104 4.5 1.0 2.8 2.1 129 chr3L 18856582 intergenic CR45388 + chr3L 18856646 intergenic CR45388 + chr3L 18856711 intergenic CR45388 + chr3L_8_18855001 chr3L_18855001 RAL-301_75b 1365 chr3L 18924480 18924505 chr3L 18924555 18924581 5 74 1.0 1.0 1.0 2.5 101 chr3L 18924480 intron CG32204 - chr3L 18924530 intron CG32204 - chr3L 18924581 intron CG32204 - chr3L_5_18920001 chr3L_18920001 RAL-301_75b 1366 chr3L 18933624 18933641 chr3L 18933718 18933735 15 94 6.0 2.0 4.0 3.0 111 chr3L 18933624 intron CG32204 - chr3L 18933680 intron CG32204 - chr3L 18933735 intron CG32204 - chr3L_15_18930001 chr3L_18930001 RAL-301_75b 1367 chr3L 18957299 18957324 chr3L 18957379 18957405 5 81 2.5 4.5 3.5 1.1 106 chr3L 18957299 intergenic not near genes chr3L 18957352 intergenic not near genes chr3L 18957405 intergenic not near genes chr3L_5_18955001 chr3L_18955001 RAL-301_75b 1368 chr3L 18969553 18969574 chr3L 18969629 18969650 5 76 2.5 7.5 5.0 0.8 97 chr3L 18969553 intergenic not near genes chr3L 18969602 intergenic not near genes chr3L 18969650 intergenic not near genes chr3L_5_18965001 chr3L_18965001 RAL-301_75b 1369 chr3L 19111405 19111409 chr3L 19111490 19111494 7 85 13.0 5.0 9.0 0.7 89 chr3L 19111405 intron CG14082 - chr3L 19111450 intron CG14082 - chr3L 19111494 intron CG14082 - chr3L_7_19110001 chr3L_19110001 RAL-301_75b 1370 chr3L 19117042 19117072 chr3L 19124488 19124519 mdg1 19 7447 3.0 3.5 3.2 4.5 7477 chr3L 19117042 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124519 intron CG14082 - chr3L_19_19120001 chr3L_19120001 RAL-301_75b 1371 chr3L 19182388 19182412 chr3L 19182467 19182493 7 81 2.5 3.5 3.0 1.8 105 chr3L 19182388 intron fz2 - chr3L 19182440 intron fz2 - chr3L 19182493 intron fz2 - chr3L_7_19180001 chr3L_19180001 RAL-301_75b 1372 chr3L 19208067 19208091 chr3L 19209441 19209465 Doc 6 1374 0.0 2.0 1.0 3.0 1398 chr3L 19208067 intron fz2 - chr3L 19208766 intron fz2 - chr3L 19209465 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-301_75b 1373 chr3L 19342761 19342774 chr3L 19342852 19342865 4 91 3.5 2.0 2.8 1.1 104 chr3L 19342761 3` UTR CG32206 - chr3L 19342813 3` UTR CG32206 - chr3L 19342865 3` UTR CG32206 - chr3L_4_19340001 chr3L_19340001 RAL-301_75b 1374 chr3L 19365918 19365920 chr3L 19366015 19366017 6 97 0.0 5.0 2.5 1.7 99 chr3L 19365918 intron CG32206 - chr3L 19365968 intron CG32206 - chr3L 19366017 intron CG32206 - chr3L_6_19365001 chr3L_19365001 RAL-301_75b 1375 chr3L 19377801 19377830 chr3L 19378487 19378516 17 686 1.5 5.0 3.2 4.0 715 chr3L 19377801 intron CG32206 - chr3L 19378158 intron CG32206 - chr3L 19378516 intron CG32206 - chr3L_17_19375001 chr3L_19375001 RAL-301_75b 1376 chr3L 19404973 19405000 chr3L 19405050 19405077 4 77 6.5 5.0 5.8 0.6 104 chr3L 19404973 intron CG32206 - chr3L 19405025 intron CG32206 - chr3L 19405077 intron CG32206 - chr3L_4_19405001 chr3L_19405001 RAL-301_75b 1377 chr3L 19430396 19430430 chr3L 19430474 19430508 11 78 5.5 1.5 3.5 2.4 112 chr3L 19430396 intergenic not near genes chr3L 19430452 intergenic not near genes chr3L 19430508 intergenic not near genes chr3L_11_19430001 chr3L_19430001 RAL-301_75b 1378 chr3L 19437017 19437040 chr3L 19437101 19437124 7 84 3.0 2.0 2.5 2.0 107 chr3L 19437017 intergenic not near genes chr3L 19437070 intergenic not near genes chr3L 19437124 intergenic not near genes chr3L_7_19435001 chr3L_19435001 RAL-301_75b 1379 chr3L 19439281 19439290 chr3L 19439367 19439376 5 86 0.0 2.5 1.2 2.3 95 chr3L 19439281 intergenic not near genes chr3L 19439328 intergenic not near genes chr3L 19439376 intergenic not near genes chr3L_5_19435001 chr3L_19435001 RAL-301_75b 1380 chr3L 19462025 19462050 chr3L 19462140 19462165 16 115 5.5 5.5 5.5 2.5 140 chr3L 19462025 intergenic not near genes chr3L 19462095 intergenic not near genes chr3L 19462165 intergenic not near genes chr3L_16_19460001 chr3L_19460001 RAL-301_75b 1381 chr3L 19479353 19479379 chr3L 19479431 19479457 11 78 4.0 1.5 2.8 2.9 104 chr3L 19479353 intergenic not near genes chr3L 19479405 intergenic not near genes chr3L 19479457 intergenic not near genes chr3L_11_19475001 chr3L_19475001 RAL-301_75b 1382 chr3L 19488479 19488501 chr3L 19488560 19488582 9 82 2.5 1.5 2.0 3.0 103 chr3L 19488479 intergenic pncr009:3L -,CG32212 + chr3L 19488530 intergenic pncr009:3L -,CG32212 + chr3L 19488582 intergenic pncr009:3L -,CG32212 + chr3L_9_19485001 chr3L_19485001 RAL-301_75b 1383 chr3L 19518824 19518844 chr3L 19518915 19518935 9 91 2.5 4.0 3.2 2.1 111 chr3L 19518824 intergenic Cpr76Ba - chr3L 19518880 intergenic not near genes chr3L 19518935 intergenic not near genes chr3L_9_19515001 chr3L_19515001 RAL-301_75b 1384 chr3L 19527923 19527946 chr3L 19528002 19528025 7 79 1.5 1.5 1.5 2.8 102 chr3L 19527923 intergenic not near genes chr3L 19527974 intergenic not near genes chr3L 19528025 intergenic not near genes chr3L_7_19525001 chr3L_19525001 RAL-301_75b 1385 chr3L 19554818 19554853 chr3L 19554912 19554944 7 94 1.5 4.0 2.8 1.8 126 chr3L 19554818 intergenic CG9300 + chr3L 19554881 intergenic CG9300 + chr3L 19554944 intergenic CG9300 + chr3L_7_19550001 chr3L_19550001 RAL-301_75b 1386 chr3L 19818614 19818617 chr3L 19819209 19819215 4 596 23.5 17.0 20.2 0.2 601 chr3L 19818614 exon Deaf1 + chr3L 19818914 intron Deaf1 + chr3L 19819215 exon Deaf1 + chr3L_4_19815001 chr3L_19815001 RAL-301_75b 1387 chr3L 19819957 19819988 chr3L 19828316 19828347 412 10 8359 13.5 17.5 15.5 0.6 8390 chr3L 19819957 exon Deaf1 + chr3L 19824152 intron Deaf1 + chr3L 19828347 exon Deaf1 + chr3L_10_19820001 chr3L_19820001 RAL-301_75b 1388 chr3L 19820300 19820316 chr3L 19827849 19827865 412 5 7549 3.0 2.0 2.5 1.4 7565 chr3L 19820300 intron Deaf1 + chr3L 19824082 intron Deaf1 + chr3L 19827865 intron Deaf1 + chr3L_5_19820001 chr3L_19820001 RAL-301_75b 1389 chr3L 19848506 19848534 chr3L 19857696 19857723 roo 12 9190 3.0 4.0 3.5 2.7 9217 chr3L 19848506 intron Papss + chr3L 19853114 intron Papss + chr3L 19857723 intron Papss + chr3L_12_19850001 chr3L_19850001 RAL-301_75b 1390 chr3L 19861824 19861853 chr3L 19863612 19863641 S-element 5 1788 1.5 1.5 1.5 2.0 1817 chr3L 19861824 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_5_19860001 chr3L_19860001 RAL-301_75b 1391 chr3L 19961276 19961378 chr3L 19961353 19961458 8 78 0.0 0.0 0.0 8.0 182 chr3L 19961276 intron Ac76E + chr3L 19961367 intron Ac76E + chr3L 19961458 intron Ac76E + chr3L_8_19960001 chr3L_19960001 RAL-301_75b 1392 chr3L 19981203 19981222 chr3L 19981283 19981302 7 80 6.0 2.0 4.0 1.4 99 chr3L 19981203 intergenic CG17732 + chr3L 19981252 intergenic CG17732 + chr3L 19981302 intergenic CG17732 + chr3L_7_19980001 chr3L_19980001 RAL-301_75b 1393 chr3L 20069152 20069168 chr3L 20069235 20069251 4 83 6.5 4.0 5.2 0.6 99 chr3L 20069152 intron sNPF-R - chr3L 20069202 intron sNPF-R - chr3L 20069251 intron sNPF-R - chr3L_4_20065001 chr3L_20065001 RAL-301_75b 1394 chr3L 20113656 20113689 chr3L 20122913 20122946 roo 5 9257 1.5 0.5 1.0 2.5 9290 chr3L 20113656 intergenic not near genes chr3L 20118301 intergenic not near genes chr3L 20122946 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-301_75b 1395 chr3L 20143084 20143111 chr3L 20143164 20143191 13 80 5.0 3.0 4.0 2.6 107 chr3L 20143084 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143191 intergenic not near genes chr3L_13_20140001 chr3L_20140001 RAL-301_75b 1396 chr3L 20148285 20148310 chr3L 20148375 20148400 4 90 4.0 1.0 2.5 1.1 115 chr3L 20148285 intergenic not near genes chr3L 20148342 intergenic not near genes chr3L 20148400 intergenic not near genes chr3L_4_20145001 chr3L_20145001 RAL-301_75b 1397 chr3L 20156166 20156191 chr3L 20156288 20156310 6 121 5.5 4.5 5.0 1.0 144 chr3L 20156166 intron CG42674 - chr3L 20156238 intron CG42674 - chr3L 20156310 intron CG42674 - chr3L_6_20155001 chr3L_20155001 RAL-301_75b 1398 chr3L 20256649 20256666 chr3L 20256762 20256782 9 116 4.0 2.5 3.2 2.1 133 chr3L 20256649 intron rdgC + chr3L 20256716 intron rdgC + chr3L 20256782 intron rdgC + chr3L_9_20255001 chr3L_20255001 RAL-301_75b 1399 chr3L 20267196 20267218 chr3L 20267856 20267878 8 660 6.0 2.5 4.2 1.5 682 chr3L 20267196 exon CG32228 + chr3L 20267537 exon CG32228 + chr3L 20267878 exon CG32228 + chr3L_8_20265001 chr3L_20265001 RAL-301_75b 1400 chr3L 20283679 20283707 chr3L 20283761 20283790 18 83 2.0 7.0 4.5 3.3 111 chr3L 20283679 intron gogo - chr3L 20283734 intron gogo - chr3L 20283790 intron gogo - chr3L_18_20280001 chr3L_20280001 RAL-301_75b 1401 chr3L 20386938 20386969 chr3L 20387040 20387071 8 102 2.5 7.0 4.8 1.4 133 chr3L 20386938 intron fbl + chr3L 20387004 intron fbl + chr3L 20387071 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-301_75b 1402 chr3L 20476753 20476762 chr3L 20484352 20484361 springer 5 7599 5.0 1.5 3.2 1.2 7608 chr3L 20476753 3` UTR isoQC + chr3L 20480557 intergenic not near genes chr3L 20484361 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RAL-301_75b 1403 chr3L 20487663 20487668 chr3L 20488114 20488119 INE-1 5 451 5.5 2.0 3.8 1.0 456 chr3L 20487663 intron ZnT77C - chr3L 20487891 intron ZnT77C - chr3L 20488119 intron ZnT77C - chr3L_5_20485001 chr3L_20485001 RAL-301_75b 1404 chr3L 20548368 20548380 chr3L 20548457 20548469 6 89 6.5 6.5 6.5 0.8 101 chr3L 20548368 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548469 intergenic not near genes chr3L_6_20545001 chr3L_20545001 RAL-301_75b 1405 chr3L 20590072 20590091 chr3L 20590607 20590625 412 5 536 0.5 3.5 2.0 1.7 553 chr3L 20590072 intergenic not near genes chr3L 20590348 intergenic not near genes chr3L 20590625 intergenic not near genes chr3L_5_20590001 chr3L_20590001 RAL-301_75b 1406 chr3L 20616142 20616156 chr3L 20616344 20616358 4 202 0.5 1.0 0.8 2.2 216 chr3L 20616142 intron knrl - chr3L 20616250 intron knrl - chr3L 20616358 intron knrl - chr3L_4_20615001 chr3L_20615001 RAL-301_75b 1407 chr3L 20645595 20645630 chr3L 20645682 20645717 10 87 2.0 5.5 3.8 2.1 122 chr3L 20645595 intergenic not near genes chr3L 20645656 intergenic not near genes chr3L 20645717 intergenic not near genes chr3L_10_20645001 chr3L_20645001 RAL-301_75b 1408 chr3L 20710758 20710787 chr3L 20710835 20710864 16 77 4.5 1.0 2.8 4.2 106 chr3L 20710758 intergenic not near genes chr3L 20710811 intergenic not near genes chr3L 20710864 intergenic not near genes chr3L_16_20710001 chr3L_20710001 RAL-301_75b 1409 chr3L 20896921 20896932 chr3L 20897000 20897008 4 78 4.0 5.0 4.5 0.7 87 chr3L 20896921 3` UTR Sfp77F - chr3L 20896964 3` UTR Sfp77F - chr3L 20897008 3` UTR Sfp77F - chr3L_4_20895001 chr3L_20895001 RAL-301_75b 1410 chr3L 21014914 21014948 chr3L 21023395 21023429 Tirant 12 8480 3.0 0.5 1.8 4.3 8515 chr3L 21014914 intron skd - chr3L 21019172 intron skd - chr3L 21023429 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-301_75b 1411 chr3L 21082209 21082241 chr3L 21082287 21082319 10 78 0.5 0.5 0.5 6.7 110 chr3L 21082209 intron ko - chr3L 21082264 intron ko - chr3L 21082319 intron ko - chr3L_10_21080001 chr3L_21080001 RAL-301_75b 1412 chr3L 21087815 21087833 chr3L 21087932 21087950 4 117 3.5 1.5 2.5 1.1 135 chr3L 21087815 intron ko - chr3L 21087882 intron ko - chr3L 21087950 intron ko - chr3L_4_21085001 chr3L_21085001 RAL-301_75b 1413 chr3L 21150929 21150964 chr3L 21151065 21151100 14 136 5.0 5.0 5.0 2.3 171 chr3L 21150929 intron Ac78C - chr3L 21151014 intron Ac78C - chr3L 21151100 intron Ac78C - chr3L_14_21150001 chr3L_21150001 RAL-301_75b 1414 chr3L 21151863 21151888 chr3L 21156947 21156972 flea 14 5084 4.0 3.5 3.8 2.9 5109 chr3L 21151863 intron Ac78C - chr3L 21154418 intron Ac78C - chr3L 21156972 intron Ac78C - chr3L_14_21150001 chr3L_21150001 RAL-301_75b 1415 chr3L 21160961 21160981 chr3L 21161057 21161077 7 96 3.5 1.5 2.5 2.0 116 chr3L 21160961 5` UTR Ac78C - chr3L 21161019 intron Ac78C - chr3L 21161077 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-301_75b 1416 chr3L 16550641 16550641 chr3L 21164715 21164715 5 4614074 8.0 18.5 13.2 0.4 4614074 chr3L 16550641 intergenic not near genes chr3L 18857678 5` UTR CR45388 + chr3L 21164715 intron Ac78C - chr3L_5_18855001 chr3L_18855001 RAL-301_75b 1417 chr3L 21170061 21170088 chr3L 21170287 21170314 6 226 0.5 5.0 2.8 1.6 253 chr3L 21170061 intron Ac78C - chr3L 21170188 intron Ac78C - chr3L 21170314 intron Ac78C - chr3L_6_21170001 chr3L_21170001 RAL-301_75b 1418 chr3L 21306165 21306180 chr3L 21315324 21315339 roo 6 9159 1.5 5.0 3.2 1.4 9174 chr3L 21306165 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310752 intron Pc - chr3L 21315339 3` UTR Pc - chr3L_6_21310001 chr3L_21310001 RAL-301_75b 1419 chr3L 21406996 21407005 chr3L 21407075 21407084 4 79 9.0 1.5 5.2 0.6 88 chr3L 21406996 intron rgn + chr3L 21407040 intron rgn + chr3L 21407084 intron rgn + chr3L_4_21405001 chr3L_21405001 RAL-301_75b 1420 chr3L 21437854 21437873 chr3L 21437944 21437963 5 90 5.0 5.5 5.2 0.8 109 chr3L 21437854 3` UTR Aef1 + chr3L 21437908 3` UTR Aef1 + chr3L 21437963 3` UTR Aef1 + chr3L_5_21435001 chr3L_21435001 RAL-301_75b 1421 chr3L 21459869 21459884 chr3L 21459946 21459960 9 77 1.0 3.5 2.2 2.8 91 chr3L 21459869 intergenic not near genes chr3L 21459914 intergenic not near genes chr3L 21459960 intergenic not near genes chr3L_9_21455001 chr3L_21455001 RAL-301_75b 1422 chr3L 21466124 21466145 chr3L 21466201 21466220 13 77 1.0 3.0 2.0 4.3 96 chr3L 21466124 intergenic not near genes chr3L 21466172 intergenic not near genes chr3L 21466220 intergenic not near genes chr3L_13_21465001 chr3L_21465001 RAL-301_75b 1423 chr3L 21498837 21498870 chr3L 21500473 21500506 1360 8 1636 3.5 0.5 2.0 2.7 1669 chr3L 21498837 intron Glg1 - chr3L 21499672 intron Glg1 - chr3L 21500506 intron Glg1 - chr3L_8_21495001 chr3L_21495001 RAL-301_75b 1424 chr3L 21637323 21637348 chr3L 21637410 21637435 9 87 5.5 1.5 3.5 2.0 112 chr3L 21637323 intron CG32444 + chr3L 21637379 intron CG32444 + chr3L 21637435 intron CG32444 + chr3L_9_21635001 chr3L_21635001 RAL-301_75b 1425 chr3L 21649776 21649795 chr3L 21650000 21650019 12 224 2.5 4.0 3.2 2.9 243 chr3L 21649776 intron CG43980 + chr3L 21649898 intron CG43980 + chr3L 21650019 intron CG43980 + chr3L_12_21645001 chr3L_21645001 RAL-301_75b 1426 chr3L 21671073 21671087 chr3L 21671221 21671235 12 148 6.0 8.0 7.0 1.5 162 chr3L 21671073 intergenic not near genes chr3L 21671154 intergenic not near genes chr3L 21671235 intergenic not near genes chr3L_12_21670001 chr3L_21670001 RAL-301_75b 1427 chr3L 21736347 21736372 chr3L 21736548 21736573 11 201 0.0 1.0 0.5 7.3 226 chr3L 21736347 intergenic CR43888 + chr3L 21736460 intergenic CR43888 + chr3L 21736573 intergenic CR43888 + chr3L_11_21735001 chr3L_21735001 RAL-301_75b 1428 chr3L 21749315 21749350 chr3L 21754475 21754510 Doc 6 5159 2.5 2.5 2.5 1.7 5195 chr3L 21749315 intron Syn1 - chr3L 21751912 intron Syn1 - chr3L 21754510 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-301_75b 1429 chr3L 21769059 21769086 chr3L 21769145 21769173 12 87 2.0 6.5 4.2 2.3 114 chr3L 21769059 intron,intron Syn1 -,CG42689 + chr3L 21769116 intron,intron Syn1 -,CG42689 + chr3L 21769173 intron,intron Syn1 -,CG42689 + chr3L_12_21765001 chr3L_21765001 RAL-301_75b 1430 chr3L 21776678 21776862 chr3L 21776764 21776965 16 92 4.0 3.5 3.8 3.3 287 chr3L 21776678 intron,intron CG42689 +,CG42552 + chr3L 21776822 intron,intron CG42689 +,CG42552 + chr3L 21776965 exon,intron CG42689 +,CG42552 + chr3L_16_21775001 chr3L_21775001 RAL-301_75b 1431 chr3L 21836726 21836763 chr3L 21836812 21836849 15 86 1.5 5.0 3.2 3.6 123 chr3L 21836726 3` UTR P5CDh1 - chr3L 21836788 3` UTR P5CDh1 - chr3L 21836849 3` UTR P5CDh1 - chr3L_15_21835001 chr3L_21835001 RAL-301_75b 1432 chr3L 21849506 21849530 chr3L 21849588 21849611 8 82 2.0 1.0 1.5 3.2 105 chr3L 21849506 intron mub + chr3L 21849558 intron mub + chr3L 21849611 intron mub + chr3L_8_21845001 chr3L_21845001 RAL-301_75b 1433 chr3L 21874999 21875023 chr3L 21875154 21875180 9 157 4.0 1.0 2.5 2.6 181 chr3L 21874999 intron mub + chr3L 21875090 intron mub + chr3L 21875180 intron mub + chr3L_9_21875001 chr3L_21875001 RAL-301_75b 1434 chr3L 21901026 21901034 chr3L 21901119 21901126 4 92 2.0 4.5 3.2 1.0 100 chr3L 21901026 intron mub + chr3L 21901076 intron mub + chr3L 21901126 intron mub + chr3L_4_21900001 chr3L_21900001 RAL-301_75b 1435 chr3L 21952451 21952474 chr3L 21953194 21953217 transib1 5 743 4.5 4.0 4.2 1.0 766 chr3L 21952451 intergenic not near genes chr3L 21952834 intergenic not near genes chr3L 21953217 intergenic not near genes chr3L_5_21950001 chr3L_21950001 RAL-301_75b 1436 chr3L 22016366 22016391 chr3L 22016482 22016507 4 116 5.5 1.0 3.2 1.0 141 chr3L 22016366 intergenic not near genes chr3L 22016436 intergenic not near genes chr3L 22016507 intergenic not near genes chr3L_4_22015001 chr3L_22015001 RAL-301_75b 1437 chr3L 22033702 22033720 chr3L 22033778 22033798 9 78 3.0 3.5 3.2 2.1 96 chr3L 22033702 intergenic not near genes chr3L 22033750 intergenic not near genes chr3L 22033798 intergenic not near genes chr3L_9_22030001 chr3L_22030001 RAL-301_75b 1438 chr3L 22046184 22046211 chr3L 22046287 22046314 19 102 4.0 3.0 3.5 4.2 130 chr3L 22046184 intron Oct-TyrR + chr3L 22046249 intron Oct-TyrR + chr3L 22046314 intron Oct-TyrR + chr3L_19_22045001 chr3L_22045001 RAL-301_75b 1439 chr3L 22099691 22099708 chr3L 22105877 22105894 3S18 6 6186 2.0 4.5 3.2 1.4 6203 chr3L 22099691 intergenic not near genes chr3L 22102792 intergenic not near genes chr3L 22105894 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-301_75b 1440 chr3L 22124811 22124841 chr3L 22124894 22124924 8 83 5.0 2.5 3.8 1.7 113 chr3L 22124811 intergenic not near genes chr3L 22124868 intergenic not near genes chr3L 22124924 intergenic not near genes chr3L_8_22120001 chr3L_22120001 RAL-301_75b 1441 chr3L 22137521 22137554 chr3L 22137598 22137631 12 77 6.0 5.0 5.5 1.8 110 chr3L 22137521 intron olf413 + chr3L 22137576 intron olf413 + chr3L 22137631 intron olf413 + chr3L_12_22135001 chr3L_22135001 RAL-301_75b 1442 chr3L 22166451 22166468 chr3L 22166530 22166546 5 77 3.0 1.5 2.2 1.6 95 chr3L 22166451 intron olf413 + chr3L 22166498 intron olf413 + chr3L 22166546 intron olf413 + chr3L_5_22165001 chr3L_22165001 RAL-301_75b 1443 chr3L 22169459 22169476 chr3L 22169552 22169569 4 93 0.5 7.0 3.8 0.8 110 chr3L 22169459 intron olf413 + chr3L 22169514 intron olf413 + chr3L 22169569 intron olf413 + chr3L_4_22165001 chr3L_22165001 RAL-301_75b 1444 chr3L 22411375 22411398 chr3L 22411451 22411474 9 77 1.0 0.5 0.8 5.0 99 chr3L 22411375 intergenic not near genes chr3L 22411424 intergenic not near genes chr3L 22411474 intergenic not near genes chr3L_9_22410001 chr3L_22410001 RAL-301_75b 1445 chr3L 22447196 22447233 chr3L 22447287 22447324 4 90 1.5 6.0 3.8 0.8 128 chr3L 22447196 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447324 intergenic not near genes chr3L_4_22445001 chr3L_22445001 RAL-301_75b 1446 chr3L 22543075 22543104 chr3L 22543152 22543181 14 77 2.5 2.0 2.2 4.4 106 chr3L 22543075 intergenic not near genes chr3L 22543128 intergenic not near genes chr3L 22543181 intergenic not near genes chr3L_14_22540001 chr3L_22540001 RAL-301_75b 1447 chr3L 22554424 22554451 chr3L 22554500 22554527 9 76 2.5 7.0 4.8 1.6 103 chr3L 22554424 intergenic not near genes chr3L 22554476 intergenic not near genes chr3L 22554527 intergenic not near genes chr3L_9_22550001 chr3L_22550001 RAL-301_75b 1448 chr3L 22555771 22555785 chr3L 22563240 22563255 blood 6 7470 7.0 0.5 3.8 1.2 7484 chr3L 22555771 intergenic not near genes chr3L 22559513 intergenic not near genes chr3L 22563255 intergenic not near genes chr3L_6_22555001 chr3L_22555001 RAL-301_75b 1449 chr3L 22569575 22569592 chr3L 22569673 22569690 8 97 6.0 2.5 4.2 1.5 115 chr3L 22569575 intergenic not near genes chr3L 22569632 intergenic not near genes chr3L 22569690 intergenic not near genes chr3L_8_22565001 chr3L_22565001 RAL-301_75b 1450 chr3L 22577624 22577651 chr3L 22582411 22582438 Doc 14 4787 2.5 3.0 2.8 3.7 4814 chr3L 22577624 intergenic not near genes chr3L 22580031 intergenic not near genes chr3L 22582438 3` UTR CG14459 - chr3L_14_22580001 chr3L_22580001 RAL-301_75b 1451 chr3L 22617200 22617206 chr3L 22624652 22624657 blood 5 7452 7.5 3.5 5.5 0.8 7457 chr3L 22617200 intron CG14459 - chr3L 22620928 intron CG14459 - chr3L 22624657 intron CG14459 - chr3L_5_22620001 chr3L_22620001 RAL-301_75b 1452 chr3L 22732465 22732480 chr3L 22732546 22732561 8 81 10.0 2.5 6.2 1.1 96 chr3L 22732465 intron CG11367 + chr3L 22732513 intron CG11367 + chr3L 22732561 intron CG11367 + chr3L_8_22730001 chr3L_22730001 RAL-301_75b 1453 chr3L 22756397 22756430 chr3L 22756474 22756506 9 76 3.0 5.0 4.0 1.8 109 chr3L 22756397 intron SPoCk + chr3L 22756452 intron SPoCk + chr3L 22756506 intron SPoCk + chr3L_9_22755001 chr3L_22755001 RAL-301_75b 1454 chr3L 22761386 22761423 chr3L 22766820 22766857 Ivk 20 5434 2.0 1.5 1.8 7.1 5471 chr3L 22761386 intron SPoCk + chr3L 22764122 intron SPoCk + chr3L 22766857 intron SPoCk + chr3L_20_22760001 chr3L_22760001 RAL-301_75b 1455 chr3L 22853691 22853715 chr3L 22853777 22853801 6 86 5.5 1.5 3.5 1.3 110 chr3L 22853691 5` UTR CR43426 + chr3L 22853746 5` UTR CR43426 + chr3L 22853801 5` UTR CR43426 + chr3L_6_22850001 chr3L_22850001 RAL-301_75b 1456 chr3L 22865989 22866007 chr3L 22867119 22867140 Doc 8 1132 7.0 1.5 4.2 1.5 1151 chr3L 22865989 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867140 intron CG33170 + chr3L_8_22865001 chr3L_22865001 RAL-301_75b 1457 chr3L 19220633 19220637 chr3L 22908066 22908066 4 3687431 7.5 16.5 12.0 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-301_75b 1458 chr3L 22989869 22989889 chr3L 22996841 22996863 297 10 6974 4.0 5.0 4.5 1.8 6994 chr3L 22989869 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996863 intergenic not near genes chr3L_10_22990001 chr3L_22990001 RAL-301_75b 1459 chr3L 23042227 23042257 chr3L 23048980 23049010 gypsy6 18 6752 3.0 5.0 4.0 3.6 6783 chr3L 23042227 intergenic not near genes chr3L 23045618 intergenic not near genes chr3L 23049010 intergenic not near genes chr3L_18_23045001 chr3L_23045001 RAL-301_75b 1460 chr3L 23088290 23088317 chr3L 23088372 23088399 6 82 1.0 1.5 1.2 2.7 109 chr3L 23088290 intergenic not near genes chr3L 23088344 intergenic not near genes chr3L 23088399 intergenic not near genes chr3L_6_23085001 chr3L_23085001 RAL-301_75b 1461 chr3L 23126023 23126055 chr3L 23126121 23126152 12 98 4.0 2.5 3.2 2.9 129 chr3L 23126023 intergenic CG33217 + chr3L 23126088 5` UTR CG33217 + chr3L 23126152 intron CG33217 + chr3L_12_23125001 chr3L_23125001 RAL-301_75b 1462 chr3L 23182261 23182287 chr3L 23182375 23182401 11 114 5.0 0.0 2.5 3.1 140 chr3L 23182261 intron CG34031 + chr3L 23182331 intron CG34031 + chr3L 23182401 intron CG34031 + chr3L_11_23180001 chr3L_23180001 RAL-301_75b 1463 chr3L 23941244 23941246 chr3L 26882298 26882299 1360 4 2941053 13.5 2.0 7.8 0.5 2941055 chr3L 23941244 intron CG40470 - chr3L 25411772 intergenic not near genes chr3L 26882299 intergenic not near genes chr3L_4_25410001 chr3L_25410001 RAL-301_75b 1464 chr3L 24012414 24012439 chr3L 24020755 24020780 roo 9 8340 1.5 3.5 2.5 2.6 8366 chr3L 24012414 intergenic not near genes chr3L 24016597 intergenic not near genes chr3L 24020780 intergenic not near genes chr3L_9_24015001 chr3L_24015001 RAL-301_75b 1465 chr3L 24168645 24168653 chr3L 24176406 24176413 ZAM 8 7760 2.0 4.0 3.0 2.0 7768 chr3L 24168645 intron Snap25 + chr3L 24172529 intron Snap25 + chr3L 24176413 intron Snap25 + chr3L_8_24170001 chr3L_24170001 RAL-301_75b 1466 chr3L 24290505 24290517 chr3L 24290856 24290868 4 351 1.5 3.0 2.2 1.2 363 chr3L 24290505 intron,3` UTR Snap25 +,CR45159 - chr3L 24290686 intron,3` UTR Snap25 +,CR45159 - chr3L 24290868 intron Snap25 + chr3L_4_24290001 chr3L_24290001 RAL-301_75b 1467 chr3L 25635714 25635740 chr3L 25635986 25636012 6 272 3.5 0.5 2.0 2.0 298 chr3L 25635714 intron CG41343 - chr3L 25635863 intron CG41343 - chr3L 25636012 intron CG41343 - chr3L_6_25635001 chr3L_25635001 RAL-301_75b 1468 chr3L 23289001 23289023 chr3L 25843682 25843704 5 2554681 23.5 24.0 23.8 0.2 2554703 chr3L 23289001 intergenic not near genes chr3L 24566352 intergenic not near genes chr3L 25843704 intron CG40178 - chr3L_5_24565001 chr3L_24565001 RAL-301_75b 1469 chr3L 25975452 25975459 chr3L 25975537 25975544 6 85 2.5 2.0 2.2 1.9 92 chr3L 25975452 intron CG40178 - chr3L 25975498 intron CG40178 - chr3L 25975544 intron CG40178 - chr3L_6_25975001 chr3L_25975001 RAL-301_75b 1470 chr3L 26008767 26008799 chr3L 26008913 26008945 4 146 2.0 5.5 3.8 0.8 178 chr3L 26008767 intron CG40178 - chr3L 26008856 intron CG40178 - chr3L 26008945 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-301_75b 1471 chr3L 26717663 26717683 chr3L 26717739 26717759 4 76 7.0 3.5 5.2 0.6 96 chr3L 26717663 intergenic not near genes chr3L 26717711 intergenic not near genes chr3L 26717759 intergenic not near genes chr3L_4_26715001 chr3L_26715001 RAL-301_75b 1472 chr3L 27660772 27660796 chr3L 27660850 27660877 7 80 3.0 4.0 3.5 1.6 105 chr3L 27660772 intergenic not near genes chr3L 27660824 intergenic not near genes chr3L 27660877 intergenic not near genes chr3L_7_27660001 chr3L_27660001 RAL-301_75b 1473 chr3R 2534141 2534163 chr3R 2541710 2541732 6 7569 10.0 7.0 8.5 0.6 7591 chr3R 2534141 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541732 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-301_75b 1474 chr3R 2556878 2556901 chr3R 2557611 2557634 5 734 17.0 11.0 14.0 0.3 756 chr3R 2556878 intron CG41056 - chr3R 2557256 intron CG41056 - chr3R 2557634 intron CG41056 - chr3R_5_2555001 chr3R_2555001 RAL-301_75b 1475 chr3R 2874330 2874343 chr3R 2874417 2874430 8 87 2.0 3.0 2.5 2.3 100 chr3R 2874330 intergenic not near genes chr3R 2874380 intergenic not near genes chr3R 2874430 intergenic not near genes chr3R_8_2870001 chr3R_2870001 RAL-301_75b 1476 chr3R 4063812 4063830 chr3R 4069092 4069110 5 5280 3.0 10.5 6.8 0.6 5298 chr3R 4063812 intergenic not near genes chr3R 4066461 intergenic not near genes chr3R 4069110 intergenic not near genes chr3R_5_4065001 chr3R_4065001 RAL-301_75b 1477 chr3R 4161542 4161564 chr3R 4161617 4161641 11 77 2.0 1.0 1.5 4.4 99 chr3R 4161542 3` UTR CG40198 - chr3R 4161592 3` UTR CG40198 - chr3R 4161641 exon CG40198 - chr3R_11_4160001 chr3R_4160001 RAL-301_75b 1478 chr3R 4206073 4206102 chr3R 4211648 4211677 mdg3 11 5575 1.5 2.0 1.8 3.9 5604 chr3R 4206073 intron CG14636 - chr3R 4208875 intron CG14636 - chr3R 4211677 intron CG14636 - chr3R_11_4205001 chr3R_4205001 RAL-301_75b 1479 chr3R 4366761 4366791 chr3R 4375143 4375174 roo 6 8383 2.0 7.5 4.8 1.0 8413 chr3R 4366761 3` UTR CG1090 + chr3R 4370968 intergenic not near genes chr3R 4375174 5` UTR CR44922 + chr3R_6_4370001 chr3R_4370001 RAL-301_75b 1480 chr3R 4408412 4408425 chr3R 4412716 4412725 Juan 5 4303 4.5 2.5 3.5 1.1 4313 chr3R 4408412 intron CG32944 - chr3R 4410568 intron CG32944 - chr3R 4412725 intron CG32944 - chr3R_5_4410001 chr3R_4410001 RAL-301_75b 1481 chr3R 4557588 4557605 chr3R 4557861 4557878 6 273 2.0 2.5 2.2 1.9 290 chr3R 4557588 intron CG34357 - chr3R 4557733 intron CG34357 - chr3R 4557878 intron CG34357 - chr3R_6_4555001 chr3R_4555001 RAL-301_75b 1482 chr3R 4609560 4609582 chr3R 4610724 4610746 1360 13 1164 3.5 11.5 7.5 1.5 1186 chr3R 4609560 intergenic not near genes chr3R 4610153 intergenic not near genes chr3R 4610746 intergenic not near genes chr3R_13_4610001 chr3R_4610001 RAL-301_75b 1483 chr3R 4627477 4627477 chr3R 4627837 4627838 4 361 14.0 17.0 15.5 0.2 361 chr3R 4627477 intron 5-HT2A + chr3R 4627658 intron 5-HT2A + chr3R 4627838 intron 5-HT2A + chr3R_4_4625001 chr3R_4625001 RAL-301_75b 1484 chr3R 4680711 4680740 chr3R 4680789 4680819 16 79 1.0 3.0 2.0 5.3 108 chr3R 4680711 intron CG43427 + chr3R 4680765 intron CG43427 + chr3R 4680819 5` UTR CG43427 + chr3R_16_4680001 chr3R_4680001 RAL-301_75b 1485 chr3R 4753247 4753267 chr3R 4757549 4757570 F-element 12 4302 3.5 9.5 6.5 1.6 4323 chr3R 4753247 intron,intron atms +,CG44098 - chr3R 4755408 intron,intron atms +,CG44098 - chr3R 4757570 intron,exon atms +,CG44098 - chr3R_12_4755001 chr3R_4755001 RAL-301_75b 1486 chr3R 4759719 4759749 chr3R 4761216 4761244 hopper2 14 1496 2.0 3.5 2.8 3.7 1525 chr3R 4759719 intron,intron atms +,CG44098 - chr3R 4760482 intron,intron atms +,CG44098 - chr3R 4761244 intron,intron atms +,CG44098 - chr3R_14_4760001 chr3R_4760001 RAL-301_75b 1487 chr3R 4769164 4769191 chr3R 4769242 4769269 6 78 2.0 1.0 1.5 2.4 105 chr3R 4769164 intron,intron atms +,CG44098 - chr3R 4769216 intron,intron atms +,CG44098 - chr3R 4769269 intron,intron atms +,CG44098 - chr3R_6_4765001 chr3R_4765001 RAL-301_75b 1488 chr3R 4861568 4861586 chr3R 4861649 4861665 8 80 4.5 3.0 3.8 1.7 97 chr3R 4861568 intron opa + chr3R 4861616 intron opa + chr3R 4861665 intron opa + chr3R_8_4860001 chr3R_4860001 RAL-301_75b 1489 chr3R 4896290 4896320 chr3R 4896383 4896413 12 93 3.0 1.5 2.2 3.8 123 chr3R 4896290 intergenic CR45580 + chr3R 4896352 intergenic CR45580 + chr3R 4896413 intergenic CR45580 + chr3R_12_4895001 chr3R_4895001 RAL-301_75b 1490 chr3R 5045844 5045869 chr3R 5052946 5052971 HMS-Beagle 10 7102 3.0 2.0 2.5 2.9 7127 chr3R 5045844 intron CR43635 - chr3R 5049408 intergenic not near genes chr3R 5052971 intergenic CR45588 - chr3R_10_5045001 chr3R_5045001 RAL-301_75b 1491 chr3R 5067983 5068006 chr3R 5073500 5073523 mdg3 8 5517 4.5 4.0 4.2 1.5 5540 chr3R 5067983 intergenic not near genes chr3R 5070753 intergenic not near genes chr3R 5073523 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-301_75b 1492 chr3R 5236224 5236246 chr3R 5236352 5236374 8 128 0.5 6.0 3.2 1.9 150 chr3R 5236224 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236299 3` UTR rtp - chr3R 5236374 3` UTR rtp - chr3R_8_5235001 chr3R_5235001 RAL-301_75b 1493 chr3R 4148501 4148502 chr3R 5245575 5245575 5 1097073 11.5 8.0 9.8 0.5 1097074 chr3R 4148501 intergenic not near genes chr3R 4697038 intron CG43427 + chr3R 5245575 intron CG12163 - chr3R_5_4695001 chr3R_4695001 RAL-301_75b 1494 chr3R 5250880 5250916 chr3R 5250992 5251026 8 111 2.5 1.5 2.0 2.7 146 chr3R 5250880 intron CG12163 - chr3R 5250953 intron CG12163 - chr3R 5251026 intron CG12163 - chr3R_8_5250001 chr3R_5250001 RAL-301_75b 1495 chr3R 5278090 5278113 chr3R 5278169 5278194 11 80 4.0 1.0 2.5 3.1 104 chr3R 5278090 intron mtd - chr3R 5278142 intron mtd - chr3R 5278194 intron mtd - chr3R_11_5275001 chr3R_5275001 RAL-301_75b 1496 chr3R 5338389 5338430 chr3R 5343566 5343607 Rt1c 12 5176 5.5 5.0 5.2 1.9 5218 chr3R 5338389 intron mtd - chr3R 5340998 intron mtd - chr3R 5343607 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-301_75b 1497 chr3R 5400512 5400538 chr3R 5400595 5400621 7 83 2.0 4.0 3.0 1.8 109 chr3R 5400512 intergenic CG2663 - chr3R 5400566 intergenic CG2663 - chr3R 5400621 3` UTR CG2663 - chr3R_7_5400001 chr3R_5400001 RAL-301_75b 1498 chr3R 5427952 5427977 chr3R 5431894 5431919 10 3941 2.0 2.0 2.0 3.3 3967 chr3R 5427952 intron CG14669 + chr3R 5429936 intron CG14669 + chr3R 5431919 intron CG14669 + chr3R_10_5425001 chr3R_5425001 RAL-301_75b 1499 chr3R 5436922 5436951 chr3R 5437007 5437036 14 85 4.0 7.0 5.5 2.2 114 chr3R 5436922 intron CG14669 + chr3R 5436979 intron CG14669 + chr3R 5437036 intron CG14669 + chr3R_14_5435001 chr3R_5435001 RAL-301_75b 1500 chr3R 5445970 5445992 chr3R 5452430 5452452 Burdock 5 6460 6.0 2.5 4.2 1.0 6482 chr3R 5445970 intron CG14669 + chr3R 5449211 intron CG14669 + chr3R 5452452 intron CG14669 + chr3R_5_5445001 chr3R_5445001 RAL-301_75b 1501 chr3R 5622877 5622903 chr3R 5623072 5623097 12 195 4.0 3.5 3.8 2.5 220 chr3R 5622877 intron,intron Spec2 -,CG2911 - chr3R 5622987 intron,intron Spec2 -,CG2911 - chr3R 5623097 intron,intron Spec2 -,CG2911 - chr3R_12_5620001 chr3R_5620001 RAL-301_75b 1502 chr3R 5746021 5746036 chr3R 5746259 5746277 pogo 7 240 1.0 2.0 1.5 2.8 256 chr3R 5746021 3` UTR Madm + chr3R 5746149 3` UTR Madm + chr3R 5746277 3` UTR Madm + chr3R_7_5745001 chr3R_5745001 RAL-301_75b 1503 chr3R 5747012 5747047 chr3R 5753202 5753238 diver 7 6190 4.0 2.0 3.0 1.8 6226 chr3R 5747012 intergenic Madm + chr3R 5750125 intergenic not near genes chr3R 5753238 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 RAL-301_75b 1504 chr3R 5786074 5786097 chr3R 5786205 5786229 7 131 1.0 8.0 4.5 1.3 155 chr3R 5786074 intron kat-60L1 + chr3R 5786152 intron kat-60L1 + chr3R 5786229 intron kat-60L1 + chr3R_7_5785001 chr3R_5785001 RAL-301_75b 1505 chr3R 5809113 5809142 chr3R 5809354 5809383 pogo 15 241 4.0 1.0 2.5 4.3 270 chr3R 5809113 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809383 3` UTR CG11000 + chr3R_15_5805001 chr3R_5805001 RAL-301_75b 1506 chr3R 5822381 5822413 chr3R 5823548 5823580 1360 12 1167 8.5 4.0 6.2 1.7 1199 chr3R 5822381 3` UTR CG2023 - chr3R 5822980 3` UTR CG2023 - chr3R 5823580 3` UTR CG2023 - chr3R_12_5820001 chr3R_5820001 RAL-301_75b 1507 chr3R 5896965 5896997 chr3R 5897323 5897356 5 358 1.0 1.0 1.0 2.5 391 chr3R 5896965 intron CG34113 - chr3R 5897160 intron CG34113 - chr3R 5897356 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-301_75b 1508 chr3R 5927568 5927589 chr3R 5927808 5927829 pogo 6 240 3.5 6.0 4.8 1.0 261 chr3R 5927568 intron CG34113 - chr3R 5927698 intron CG34113 - chr3R 5927829 intron CG34113 - chr3R_6_5925001 chr3R_5925001 RAL-301_75b 1509 chr3R 5934759 5934770 chr3R 5934874 5934886 4 115 5.0 4.5 4.8 0.7 127 chr3R 5934759 intron CG34113 - chr3R 5934822 intron CG34113 - chr3R 5934886 intron CG34113 - chr3R_4_5930001 chr3R_5930001 RAL-301_75b 1510 chr3R 5942471 5942497 chr3R 5942568 5942595 7 97 1.5 1.5 1.5 2.8 124 chr3R 5942471 intron CG34113 - chr3R 5942533 intron CG34113 - chr3R 5942595 intron CG34113 - chr3R_7_5940001 chr3R_5940001 RAL-301_75b 1511 chr3R 6015961 6015987 chr3R 6024442 6024468 Tirant 6 8480 2.5 0.0 1.2 2.7 8507 chr3R 6015961 intergenic not near genes chr3R 6020214 intergenic not near genes chr3R 6024468 intergenic not near genes chr3R_6_6020001 chr3R_6020001 RAL-301_75b 1512 chr3R 6042588 6042597 chr3R 6042685 6042694 4 97 6.0 6.0 6.0 0.6 106 chr3R 6042588 intergenic not near genes chr3R 6042641 intergenic not near genes chr3R 6042694 intergenic not near genes chr3R_4_6040001 chr3R_6040001 RAL-301_75b 1513 chr3R 6121167 6121193 chr3R 6121385 6121411 BS 5 218 0.5 2.5 1.5 2.0 244 chr3R 6121167 intergenic not near genes chr3R 6121289 intergenic not near genes chr3R 6121411 intergenic not near genes chr3R_5_6120001 chr3R_6120001 RAL-301_75b 1514 chr3R 6141931 6141948 chr3R 6142006 6142025 7 76 3.0 5.0 4.0 1.4 94 chr3R 6141931 intergenic not near genes chr3R 6141978 intergenic not near genes chr3R 6142025 intergenic not near genes chr3R_7_6140001 chr3R_6140001 RAL-301_75b 1515 chr3R 6158509 6158539 chr3R 6167091 6167121 Tirant 12 8582 6.0 3.0 4.5 2.2 8612 chr3R 6158509 intergenic not near genes chr3R 6162815 intergenic not near genes chr3R 6167121 intergenic CG1077 + chr3R_12_6160001 chr3R_6160001 RAL-301_75b 1516 chr3R 6175171 6175200 chr3R 6182443 6182471 HMS-Beagle2 9 7271 4.5 2.0 3.2 2.1 7300 chr3R 6175171 intergenic Osi1 + chr3R 6178821 intron CR45194 + chr3R 6182471 intergenic CR45194 + chr3R_9_6175001 chr3R_6175001 RAL-301_75b 1517 chr3R 6206286 6206315 chr3R 6206502 6206532 BS 8 217 1.5 5.5 3.5 1.8 246 chr3R 6206286 exon Osi24 + chr3R 6206409 intron Osi24 + chr3R 6206532 intron Osi24 + chr3R_8_6205001 chr3R_6205001 RAL-301_75b 1518 chr3R 6343707 6343727 chr3R 6343810 6343830 6 103 0.5 2.0 1.2 2.7 123 chr3R 6343707 3` UTR CG10298 + chr3R 6343768 3` UTR CG10298 + chr3R 6343830 intergenic CG10298 +,CG17919 + chr3R_6_6340001 chr3R_6340001 RAL-301_75b 1519 chr3R 6519113 6519141 chr3R 6519221 6519245 11 107 3.0 1.5 2.2 3.4 132 chr3R 6519113 intergenic not near genes chr3R 6519179 intergenic not near genes chr3R 6519245 intergenic not near genes chr3R_11_6515001 chr3R_6515001 RAL-301_75b 1520 chr3R 6538210 6538226 chr3R 6538307 6538324 5 98 2.5 4.0 3.2 1.2 114 chr3R 6538210 intron dpr11 - chr3R 6538267 intron dpr11 - chr3R 6538324 exon dpr11 - chr3R_5_6535001 chr3R_6535001 RAL-301_75b 1521 chr3R 6550330 6550343 chr3R 6550411 6550424 8 81 2.5 3.5 3.0 2.0 94 chr3R 6550330 intron dpr11 - chr3R 6550377 intron dpr11 - chr3R 6550424 intron dpr11 - chr3R_8_6550001 chr3R_6550001 RAL-301_75b 1522 chr3R 6551117 6551127 chr3R 6551211 6551221 5 93 6.5 9.5 8.0 0.6 104 chr3R 6551117 intron dpr11 - chr3R 6551169 intron dpr11 - chr3R 6551221 intron dpr11 - chr3R_5_6550001 chr3R_6550001 RAL-301_75b 1523 chr3R 6561968 6561984 chr3R 6562051 6562068 8 83 1.5 4.5 3.0 2.0 100 chr3R 6561968 intron dpr11 - chr3R 6562018 intron dpr11 - chr3R 6562068 intron dpr11 - chr3R_8_6560001 chr3R_6560001 RAL-301_75b 1524 chr3R 6624264 6624275 chr3R 6624344 6624357 6 82 2.5 2.5 2.5 1.7 93 chr3R 6624264 intergenic not near genes chr3R 6624310 intergenic not near genes chr3R 6624357 intergenic not near genes chr3R_6_6620001 chr3R_6620001 RAL-301_75b 1525 chr3R 6698008 6698037 chr3R 6698087 6698116 8 79 4.0 3.0 3.5 1.8 108 chr3R 6698008 intergenic not near genes chr3R 6698062 intergenic not near genes chr3R 6698116 intergenic not near genes chr3R_8_6695001 chr3R_6695001 RAL-301_75b 1526 chr3R 6740275 6740287 chr3R 6740507 6740519 7 232 4.0 1.5 2.8 1.8 244 chr3R 6740275 intron pb - chr3R 6740397 intron pb - chr3R 6740519 intron pb - chr3R_7_6740001 chr3R_6740001 RAL-301_75b 1527 chr3R 6773568 6773579 chr3R 6773647 6773667 4 86 3.5 6.0 4.8 0.7 99 chr3R 6773568 intron CR42721 + chr3R 6773618 intron CR42721 + chr3R 6773667 intron CR42721 + chr3R_4_6770001 chr3R_6770001 RAL-301_75b 1528 chr3R 6780461 6780482 chr3R 6780543 6780564 9 83 4.0 7.0 5.5 1.4 103 chr3R 6780461 intergenic not near genes chr3R 6780512 intergenic not near genes chr3R 6780564 intergenic not near genes chr3R_9_6780001 chr3R_6780001 RAL-301_75b 1529 chr3R 6782439 6782468 chr3R 6782517 6782547 7 78 2.0 4.0 3.0 1.8 108 chr3R 6782439 intergenic not near genes chr3R 6782493 intergenic not near genes chr3R 6782547 intergenic not near genes chr3R_7_6780001 chr3R_6780001 RAL-301_75b 1530 chr3R 6807261 6807292 chr3R 6807343 6807374 7 81 2.5 1.0 1.8 2.5 113 chr3R 6807261 intergenic not near genes chr3R 6807318 intergenic not near genes chr3R 6807374 intergenic not near genes chr3R_7_6805001 chr3R_6805001 RAL-301_75b 1531 chr3R 6828025 6828039 chr3R 6828101 6828112 7 75 0.5 5.0 2.8 1.8 87 chr3R 6828025 intron Scr - chr3R 6828068 intron Scr - chr3R 6828112 intron Scr - chr3R_7_6825001 chr3R_6825001 RAL-301_75b 1532 chr3R 6862223 6862252 chr3R 6862310 6862337 13 87 1.5 4.5 3.0 3.2 114 chr3R 6862223 intergenic not near genes chr3R 6862280 intergenic not near genes chr3R 6862337 intergenic not near genes chr3R_13_6860001 chr3R_6860001 RAL-301_75b 1533 chr3R 6891251 6891260 chr3R 6891327 6891336 4 76 2.5 3.0 2.8 1.1 85 chr3R 6891251 intergenic not near genes chr3R 6891294 intergenic not near genes chr3R 6891336 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-301_75b 1534 chr3R 6912102 6912129 chr3R 6912213 6912238 6 111 1.5 0.0 0.8 3.3 136 chr3R 6912102 intron Antp - chr3R 6912170 intron Antp - chr3R 6912238 intron Antp - chr3R_6_6910001 chr3R_6910001 RAL-301_75b 1535 chr3R 6923582 6923615 chr3R 6923669 6923701 6 86 2.0 2.0 2.0 2.0 119 chr3R 6923582 intron Antp - chr3R 6923642 intron Antp - chr3R 6923701 intron Antp - chr3R_6_6920001 chr3R_6920001 RAL-301_75b 1536 chr3R 6961183 6961203 chr3R 6961262 6961282 9 78 2.5 8.0 5.2 1.5 99 chr3R 6961183 intron Antp - chr3R 6961232 intron Antp - chr3R 6961282 intron Antp - chr3R_9_6960001 chr3R_6960001 RAL-301_75b 1537 chr3R 7103292 7103311 chr3R 7103366 7103387 9 76 4.5 4.0 4.2 1.7 95 chr3R 7103292 intron Alh - chr3R 7103340 intron Alh - chr3R 7103387 intron Alh - chr3R_9_7100001 chr3R_7100001 RAL-301_75b 1538 chr3R 7126511 7126533 chr3R 7126603 7126628 14 95 2.5 2.0 2.2 4.4 117 chr3R 7126511 3` UTR CG10068 - chr3R 7126570 3` UTR CG10068 - chr3R 7126628 3` UTR CG10068 - chr3R_14_7125001 chr3R_7125001 RAL-301_75b 1539 chr3R 7173686 7173707 chr3R 7173765 7173787 7 80 4.0 4.5 4.2 1.3 101 chr3R 7173686 intron sas + chr3R 7173736 intron sas + chr3R 7173787 intron sas + chr3R_7_7170001 chr3R_7170001 RAL-301_75b 1540 chr3R 7217466 7217489 chr3R 7217687 7217710 5 221 1.5 6.5 4.0 1.0 244 chr3R 7217466 intergenic CG14605 -,CG14606 - chr3R 7217588 intergenic CG14605 - chr3R 7217710 3` UTR CG14605 - chr3R_5_7215001 chr3R_7215001 RAL-301_75b 1541 chr3R 7506355 7506370 chr3R 7506454 7506470 7 100 5.5 1.0 3.2 1.7 115 chr3R 7506355 intergenic not near genes chr3R 7506412 intergenic not near genes chr3R 7506470 intergenic not near genes chr3R_7_7505001 chr3R_7505001 RAL-301_75b 1542 chr3R 7590323 7590346 chr3R 7590401 7590424 7 78 1.0 3.5 2.2 2.2 101 chr3R 7590323 intron CG34127 - chr3R 7590374 intron CG34127 - chr3R 7590424 intron CG34127 - chr3R_7_7590001 chr3R_7590001 RAL-301_75b 1543 chr3R 7621559 7621562 chr3R 7621649 7621652 4 90 2.0 7.5 4.8 0.7 93 chr3R 7621559 intron CG34127 - chr3R 7621606 intron CG34127 - chr3R 7621652 intron CG34127 - chr3R_4_7620001 chr3R_7620001 RAL-301_75b 1544 chr3R 7655004 7655040 chr3R 7655086 7655122 9 82 1.5 3.5 2.5 2.6 118 chr3R 7655004 intergenic not near genes chr3R 7655063 intergenic not near genes chr3R 7655122 intergenic not near genes chr3R_9_7655001 chr3R_7655001 RAL-301_75b 1545 chr3R 7677914 7677938 chr3R 7678027 7678051 6 113 1.5 2.0 1.8 2.1 137 chr3R 7677914 intron Nlg1 + chr3R 7677982 intron Nlg1 + chr3R 7678051 intron Nlg1 + chr3R_6_7675001 chr3R_7675001 RAL-301_75b 1546 chr3R 7694584 7694599 chr3R 7713645 7713660 invader3 6 19061 6.5 5.0 5.8 0.9 19076 chr3R 7694584 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713660 intergenic not near genes chr3R_6_7700001 chr3R_7700001 RAL-301_75b 1547 chr3R 7717258 7717269 chr3R 7717339 7717348 8 80 4.5 8.0 6.2 1.1 90 chr3R 7717258 intergenic not near genes chr3R 7717303 intergenic not near genes chr3R 7717348 intergenic not near genes chr3R_8_7715001 chr3R_7715001 RAL-301_75b 1548 chr3R 7729467 7729496 chr3R 7737403 7737434 Stalker2 7 7938 2.0 4.5 3.2 1.7 7967 chr3R 7729467 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737434 intergenic not near genes chr3R_7_7730001 chr3R_7730001 RAL-301_75b 1549 chr3R 7738122 7738140 chr3R 7738200 7738218 7 78 1.0 3.0 2.0 2.3 96 chr3R 7738122 intergenic not near genes chr3R 7738170 intergenic not near genes chr3R 7738218 intergenic not near genes chr3R_7_7735001 chr3R_7735001 RAL-301_75b 1550 chr3R 7770945 7770949 chr3R 7779652 7779656 5 8707 23.0 23.0 23.0 0.2 8711 chr3R 7770945 3` UTR CG11286 - chr3R 7775300 intergenic not near genes chr3R 7779656 intergenic not near genes chr3R_5_7775001 chr3R_7775001 RAL-301_75b 1551 chr3R 7793348 7793375 chr3R 7793427 7793454 12 79 0.5 0.5 0.5 8.0 106 chr3R 7793348 3` UTR CG10086 + chr3R 7793401 3` UTR CG10086 + chr3R 7793454 3` UTR CG10086 + chr3R_12_7790001 chr3R_7790001 RAL-301_75b 1552 chr3R 7821726 7821745 chr3R 7821822 7821841 11 96 7.0 2.5 4.8 1.9 115 chr3R 7821726 intron CG34384 + chr3R 7821784 intron CG34384 + chr3R 7821841 intron CG34384 + chr3R_11_7820001 chr3R_7820001 RAL-301_75b 1553 chr3R 7849663 7849672 chr3R 7850830 7850839 1360 4 1167 2.5 5.0 3.8 0.8 1176 chr3R 7849663 intron CG34384 + chr3R 7850251 intron CG34384 + chr3R 7850839 intron CG34384 + chr3R_4_7850001 chr3R_7850001 RAL-301_75b 1554 chr3R 7973319 7973347 chr3R 7974381 7974409 1360 9 1062 1.5 4.5 3.0 2.2 1090 chr3R 7973319 intergenic not near genes chr3R 7973864 intergenic not near genes chr3R 7974409 3` UTR CD98hc - chr3R_9_7970001 chr3R_7970001 RAL-301_75b 1555 chr3R 8056116 8056146 chr3R 8056204 8056232 4 88 4.0 0.5 2.2 1.2 116 chr3R 8056116 intergenic CG43060 + chr3R 8056174 intergenic CG43060 + chr3R 8056232 intergenic CG43060 + chr3R_4_8055001 chr3R_8055001 RAL-301_75b 1556 chr3R 8072861 8072889 chr3R 8072936 8072965 6 75 1.5 5.5 3.5 1.3 104 chr3R 8072861 intron mAChR-B + chr3R 8072913 intron mAChR-B + chr3R 8072965 intron mAChR-B + chr3R_6_8070001 chr3R_8070001 RAL-301_75b 1557 chr3R 8101767 8101788 chr3R 8104850 8104870 G2 7 3083 2.0 5.5 3.8 1.5 3103 chr3R 8101767 exon CG7900 + chr3R 8103318 intron CG7900 + chr3R 8104870 3` UTR CG7900 + chr3R_7_8100001 chr3R_8100001 RAL-301_75b 1558 chr3R 8339241 8339247 chr3R 21907534 21907536 15 13568289 17.0 15.5 16.2 0.9 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_15_15120001 chr3R_15120001 RAL-301_75b 1559 chr3R 8403021 8403041 chr3R 8412187 8412207 roo 8 9166 2.0 4.5 3.2 1.9 9186 chr3R 8403021 intron CG45263 - chr3R 8407614 intron CG45263 - chr3R 8412207 intron CG45263 - chr3R_8_8405001 chr3R_8405001 RAL-301_75b 1560 chr3R 8468019 8468022 chr3R 8468104 8468109 4 86 3.0 4.0 3.5 0.9 90 chr3R 8468019 intron CG45263 - chr3R 8468064 intron CG45263 - chr3R 8468109 intron CG45263 - chr3R_4_8465001 chr3R_8465001 RAL-301_75b 1561 chr3R 8534778 8534810 chr3R 8535035 8535067 6 257 3.0 4.0 3.5 1.3 289 chr3R 8534778 intergenic not near genes chr3R 8534922 intergenic not near genes chr3R 8535067 intergenic not near genes chr3R_6_8530001 chr3R_8530001 RAL-301_75b 1562 chr3R 8570475 8570493 chr3R 8575140 8575159 HMS-Beagle 6 4666 3.0 2.0 2.5 1.7 4684 chr3R 8570475 intergenic not near genes chr3R 8572817 intergenic not near genes chr3R 8575159 intergenic not near genes chr3R_6_8570001 chr3R_8570001 RAL-301_75b 1563 chr3R 8601770 8601799 chr3R 8610923 8610952 roo 11 9153 1.5 4.0 2.8 2.9 9182 chr3R 8601770 intron 5-HT2B + chr3R 8606361 intron 5-HT2B + chr3R 8610952 intron 5-HT2B + chr3R_11_8605001 chr3R_8605001 RAL-301_75b 1564 chr3R 8642425 8642444 chr3R 8642502 8642521 4 77 1.0 4.0 2.5 1.1 96 chr3R 8642425 intergenic not near genes chr3R 8642473 intergenic not near genes chr3R 8642521 intergenic not near genes chr3R_4_8640001 chr3R_8640001 RAL-301_75b 1565 chr3R 8685303 8685315 chr3R 8685403 8685415 6 99 2.5 6.5 4.5 1.1 112 chr3R 8685303 intron CR44937 - chr3R 8685359 intron CR44937 - chr3R 8685415 intron CR44937 - chr3R_6_8685001 chr3R_8685001 RAL-301_75b 1566 chr3R 8707358 8707375 chr3R 8709799 8709816 jockey 9 2441 10.5 5.0 7.8 1.0 2458 chr3R 8707358 intergenic not near genes chr3R 8708587 intergenic not near genes chr3R 8709816 intergenic not near genes chr3R_9_8705001 chr3R_8705001 RAL-301_75b 1567 chr3R 8807605 8807625 chr3R 8807697 8807717 4 92 6.0 1.5 3.8 0.8 112 chr3R 8807605 intergenic hng2 + chr3R 8807661 intergenic hng2 + chr3R 8807717 intergenic hng2 + chr3R_4_8805001 chr3R_8805001 RAL-301_75b 1568 chr3R 8917889 8917911 chr3R 8917969 8917990 8 80 3.0 10.5 6.8 1.0 101 chr3R 8917889 intron pyd - chr3R 8917940 intron pyd - chr3R 8917990 intron pyd - chr3R_8_8915001 chr3R_8915001 RAL-301_75b 1569 chr3R 9082049 9082068 chr3R 9082140 9082162 8 93 2.0 3.0 2.5 2.3 113 chr3R 9082049 intron pum - chr3R 9082106 intron pum - chr3R 9082162 intron pum - chr3R_8_9080001 chr3R_9080001 RAL-301_75b 1570 chr3R 9094379 9094401 chr3R 9094714 9094735 11 335 1.0 3.0 2.0 3.7 356 chr3R 9094379 intron pum - chr3R 9094557 intron pum - chr3R 9094735 intron pum - chr3R_11_9090001 chr3R_9090001 RAL-301_75b 1571 chr3R 9108875 9108882 chr3R 9108951 9108957 4 76 2.0 4.0 3.0 1.0 82 chr3R 9108875 intron pum - chr3R 9108916 intron pum - chr3R 9108957 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-301_75b 1572 chr3R 9164632 9164651 chr3R 9164709 9164728 8 77 0.5 0.5 0.5 5.3 96 chr3R 9164632 intron pum - chr3R 9164680 intron pum - chr3R 9164728 intron pum - chr3R_8_9160001 chr3R_9160001 RAL-301_75b 1573 chr3R 9251428 9251459 chr3R 9251508 9251539 14 80 4.0 4.0 4.0 2.8 111 chr3R 9251428 3` UTR CG8420 + chr3R 9251484 intergenic CG8420 +,St2 + chr3R 9251539 intergenic CG8420 +,St2 + chr3R_14_9250001 chr3R_9250001 RAL-301_75b 1574 chr3R 9278785 9278811 chr3R 9284045 9284071 Rt1a 16 5260 6.0 8.0 7.0 2.0 5286 chr3R 9278785 intergenic not near genes chr3R 9281428 intergenic not near genes chr3R 9284071 intergenic not near genes chr3R_16_9280001 chr3R_9280001 RAL-301_75b 1575 chr3R 9318543 9318562 chr3R 9318633 9318652 13 90 2.5 4.0 3.2 3.1 109 chr3R 9318543 intron CG8861 - chr3R 9318598 intron CG8861 - chr3R 9318652 intron CG8861 - chr3R_13_9315001 chr3R_9315001 RAL-301_75b 1576 chr3R 9319588 9319598 chr3R 9320023 9320033 jockey 4 434 6.0 9.5 7.8 0.5 445 chr3R 9319588 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320033 intron CG8861 - chr3R_4_9315001 chr3R_9315001 RAL-301_75b 1577 chr3R 9327430 9327446 chr3R 9334277 9334293 5 6847 3.5 22.5 13.0 0.4 6863 chr3R 9327430 intron CG8861 - chr3R 9330862 intergenic CG16749 - chr3R 9334293 exon CG8866 - chr3R_5_9330001 chr3R_9330001 RAL-301_75b 1578 chr3R 9347847 9347878 chr3R 9347929 9347959 7 82 2.5 5.5 4.0 1.4 112 chr3R 9347847 intron CG45050 + chr3R 9347903 intron CG45050 + chr3R 9347959 intron CG45050 + chr3R_7_9345001 chr3R_9345001 RAL-301_75b 1579 chr3R 9361819 9361845 chr3R 9362059 9362086 pogo 5 241 3.0 2.0 2.5 1.4 267 chr3R 9361819 3` UTR CG45050 + chr3R 9361952 3` UTR CG45050 + chr3R 9362086 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-301_75b 1580 chr3R 9382825 9382849 chr3R 9382950 9382974 9 125 2.0 6.0 4.0 1.8 149 chr3R 9382825 intron FER - chr3R 9382900 intron FER - chr3R 9382974 intron FER - chr3R_9_9380001 chr3R_9380001 RAL-301_75b 1581 chr3R 9422385 9422413 chr3R 9422479 9422507 9 94 0.0 6.0 3.0 2.2 122 chr3R 9422385 intron ps + chr3R 9422446 intron ps + chr3R 9422507 intron ps + chr3R_9_9420001 chr3R_9420001 RAL-301_75b 1582 chr3R 9435079 9435095 chr3R 9435165 9435180 9 86 1.5 0.5 1.0 4.5 101 chr3R 9435079 intron ps + chr3R 9435130 intron ps + chr3R 9435180 intron ps + chr3R_9_9435001 chr3R_9435001 RAL-301_75b 1583 chr3R 9440334 9440369 chr3R 9440420 9440454 14 86 1.0 3.0 2.0 4.7 120 chr3R 9440334 intron ps + chr3R 9440394 intron ps + chr3R 9440454 intron ps + chr3R_14_9440001 chr3R_9440001 RAL-301_75b 1584 chr3R 9449597 9449634 chr3R 9449692 9449729 8 95 0.5 4.0 2.2 2.5 132 chr3R 9449597 3` UTR ps + chr3R 9449663 3` UTR ps + chr3R 9449729 3` UTR ps + chr3R_8_9445001 chr3R_9445001 RAL-301_75b 1585 chr3R 9453535 9453568 chr3R 9453612 9453645 16 77 3.0 2.5 2.8 4.2 110 chr3R 9453535 3` UTR ps + chr3R 9453590 3` UTR ps + chr3R 9453645 3` UTR ps + chr3R_16_9450001 chr3R_9450001 RAL-301_75b 1586 chr3R 9620956 9620956 chr3R 21907535 21907536 5 12286580 6.0 16.0 11.0 0.4 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-301_75b 1587 chr3R 9644591 9644613 chr3R 9644672 9644694 8 81 1.5 3.5 2.5 2.3 103 chr3R 9644591 intron Dh44 + chr3R 9644642 intron Dh44 + chr3R 9644694 intron Dh44 + chr3R_8_9640001 chr3R_9640001 RAL-301_75b 1588 chr3R 9836879 9836895 chr3R 9836967 9836982 4 88 12.0 9.5 10.8 0.3 103 chr3R 9836879 intron Teh1 - chr3R 9836930 intron Teh1 - chr3R 9836982 intron Teh1 - chr3R_4_9835001 chr3R_9835001 RAL-301_75b 1589 chr3R 9891462 9891483 chr3R 9891602 9891622 5 140 1.5 0.0 0.8 2.8 160 chr3R 9891462 intron Glut4EF + chr3R 9891542 intron Glut4EF + chr3R 9891622 intron Glut4EF + chr3R_5_9890001 chr3R_9890001 RAL-301_75b 1590 chr3R 10073775 10073793 chr3R 10073884 10073901 5 108 3.5 2.5 3.0 1.2 126 chr3R 10073775 intergenic nerfin-2 +,CG5361 - chr3R 10073838 3` UTR CG5361 - chr3R 10073901 exon CG5361 - chr3R_5_10070001 chr3R_10070001 RAL-301_75b 1591 chr3R 10158494 10158498 chr3R 10158569 10158580 5 81 6.5 3.0 4.8 0.9 86 chr3R 10158494 3` UTR Invadolysin + chr3R 10158537 3` UTR Invadolysin + chr3R 10158580 3` UTR Invadolysin + chr3R_5_10155001 chr3R_10155001 RAL-301_75b 1592 chr3R 10231790 10231803 chr3R 10237367 10237380 mdg3 10 5577 5.0 0.5 2.8 2.6 5590 chr3R 10231790 intron CG42795 + chr3R 10234585 intron CG42795 + chr3R 10237380 intron CG42795 + chr3R_10_10230001 chr3R_10230001 RAL-301_75b 1593 chr3R 10275556 10275584 chr3R 10275633 10275661 11 77 1.5 4.5 3.0 2.8 105 chr3R 10275556 intron CG43143 + chr3R 10275608 intron CG43143 + chr3R 10275661 intron CG43143 + chr3R_11_10275001 chr3R_10275001 RAL-301_75b 1594 chr3R 10531867 10531898 chr3R 10531946 10531976 15 80 1.5 1.0 1.2 6.8 109 chr3R 10531867 intron hth - chr3R 10531922 intron hth - chr3R 10531976 intron hth - chr3R_15_10530001 chr3R_10530001 RAL-301_75b 1595 chr3R 10563470 10563490 chr3R 10563567 10563588 7 98 1.0 8.0 4.5 1.3 118 chr3R 10563470 intron hth - chr3R 10563529 intron hth - chr3R 10563588 intron hth - chr3R_7_10560001 chr3R_10560001 RAL-301_75b 1596 chr3R 10593432 10593462 chr3R 10593517 10593546 6 84 0.5 1.0 0.8 3.3 114 chr3R 10593432 intron hth - chr3R 10593489 intron hth - chr3R 10593546 intron hth - chr3R_6_10590001 chr3R_10590001 RAL-301_75b 1597 chr3R 10651807 10651839 chr3R 10651906 10651937 10 98 0.0 2.0 1.0 5.0 130 chr3R 10651807 intergenic not near genes chr3R 10651872 intergenic not near genes chr3R 10651937 intergenic not near genes chr3R_10_10650001 chr3R_10650001 RAL-301_75b 1598 chr3R 10653758 10653786 chr3R 10653836 10653864 6 78 0.0 2.0 1.0 3.0 106 chr3R 10653758 intergenic not near genes chr3R 10653811 intergenic not near genes chr3R 10653864 intergenic not near genes chr3R_6_10650001 chr3R_10650001 RAL-301_75b 1599 chr3R 10668603 10668611 chr3R 10668679 10668683 8 75 9.5 4.0 6.8 1.0 80 chr3R 10668603 intergenic not near genes chr3R 10668643 intergenic not near genes chr3R 10668683 intergenic not near genes chr3R_8_10665001 chr3R_10665001 RAL-301_75b 1600 chr3R 10723768 10723782 chr3R 10723860 10723874 7 91 6.5 0.5 3.5 1.6 106 chr3R 10723768 intergenic not near genes chr3R 10723821 intergenic not near genes chr3R 10723874 intergenic not near genes chr3R_7_10720001 chr3R_10720001 RAL-301_75b 1601 chr3R 10727649 10727676 chr3R 10727729 10727756 11 80 6.0 5.0 5.5 1.7 107 chr3R 10727649 intergenic not near genes chr3R 10727702 intergenic not near genes chr3R 10727756 intergenic not near genes chr3R_11_10725001 chr3R_10725001 RAL-301_75b 1602 chr3R 10732328 10732344 chr3R 10733200 10733216 7 871 2.0 3.5 2.8 1.8 888 chr3R 10732328 intergenic not near genes chr3R 10732772 intergenic not near genes chr3R 10733216 intergenic not near genes chr3R_7_10730001 chr3R_10730001 RAL-301_75b 1603 chr3R 10745425 10745454 chr3R 10745512 10745541 8 86 4.5 1.0 2.8 2.1 116 chr3R 10745425 intron TkR86C - chr3R 10745483 intron TkR86C - chr3R 10745541 intron TkR86C - chr3R_8_10745001 chr3R_10745001 RAL-301_75b 1604 chr3R 10817219 10817251 chr3R 10817301 10817334 14 82 2.0 2.0 2.0 4.7 115 chr3R 10817219 3` UTR CG4089 + chr3R 10817276 3` UTR CG4089 + chr3R 10817334 3` UTR CG4089 + chr3R_14_10815001 chr3R_10815001 RAL-301_75b 1605 chr3R 10868608 10868621 chr3R 10868684 10868699 4 78 2.0 3.0 2.5 1.1 91 chr3R 10868608 5` UTR SelR - chr3R 10868654 intergenic SelR -,Tsp86D + chr3R 10868699 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-301_75b 1606 chr3R 10904620 10904630 chr3R 10906744 10906753 8 2124 9.0 7.0 8.0 0.9 2133 chr3R 10904620 intergenic not near genes chr3R 10905686 intergenic not near genes chr3R 10906753 intergenic not near genes chr3R_8_10905001 chr3R_10905001 RAL-301_75b 1607 chr3R 10919683 10919718 chr3R 10919761 10919795 9 77 3.0 2.0 2.5 2.6 112 chr3R 10919683 intergenic not near genes chr3R 10919739 intergenic not near genes chr3R 10919795 intergenic not near genes chr3R_9_10915001 chr3R_10915001 RAL-301_75b 1608 chr3R 10920062 10920079 chr3R 10920140 10920157 8 78 2.5 12.5 7.5 0.9 95 chr3R 10920062 intergenic not near genes chr3R 10920110 intergenic not near genes chr3R 10920157 intergenic not near genes chr3R_8_10920001 chr3R_10920001 RAL-301_75b 1609 chr3R 10957863 10957881 chr3R 10963252 10963263 Rt1c 6 5388 3.0 2.0 2.5 1.7 5400 chr3R 10957863 intergenic not near genes chr3R 10960563 intergenic not near genes chr3R 10963263 intergenic not near genes chr3R_6_10960001 chr3R_10960001 RAL-301_75b 1610 chr3R 10979658 10979677 chr3R 10979740 10979759 7 82 2.5 5.0 3.8 1.5 101 chr3R 10979658 intron CG34114 + chr3R 10979708 intron CG34114 + chr3R 10979759 intron CG34114 + chr3R_7_10975001 chr3R_10975001 RAL-301_75b 1611 chr3R 10994280 10994307 chr3R 10994359 10994386 7 79 4.0 3.5 3.8 1.5 106 chr3R 10994280 intron CG34114 + chr3R 10994333 intron CG34114 + chr3R 10994386 intron CG34114 + chr3R_7_10990001 chr3R_10990001 RAL-301_75b 1612 chr3R 11024178 11024203 chr3R 11024274 11024299 7 96 4.5 2.5 3.5 1.6 121 chr3R 11024178 intron CG34114 + chr3R 11024238 intron CG34114 + chr3R 11024299 intron CG34114 + chr3R_7_11020001 chr3R_11020001 RAL-301_75b 1613 chr3R 11085461 11085492 chr3R 11085538 11085569 9 77 0.5 2.0 1.2 4.1 108 chr3R 11085461 3` UTR CR44940 - chr3R 11085515 intergenic CR44940 - chr3R 11085569 intergenic CR44940 - chr3R_9_11085001 chr3R_11085001 RAL-301_75b 1614 chr3R 11102325 11102339 chr3R 11102406 11102420 4 81 4.0 1.5 2.8 1.1 95 chr3R 11102325 intergenic not near genes chr3R 11102372 intergenic not near genes chr3R 11102420 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-301_75b 1615 chr3R 11155042 11155071 chr3R 11155120 11155149 10 78 1.0 3.0 2.0 3.3 107 chr3R 11155042 intron Ugt86Dc + chr3R 11155096 intron Ugt86Dc + chr3R 11155149 intron Ugt86Dc + chr3R_10_11155001 chr3R_11155001 RAL-301_75b 1616 chr3R 11174610 11174612 chr3R 11175324 11175326 4 714 19.0 15.5 17.2 0.2 716 chr3R 11174610 exon Ugt86Dj - chr3R 11174968 intron Ugt86Dj - chr3R 11175326 exon Ugt86Dj - chr3R_4_11170001 chr3R_11170001 RAL-301_75b 1617 chr3R 11192284 11192313 chr3R 11192931 11192958 17 646 3.0 5.0 4.0 3.4 674 chr3R 11192284 intergenic not near genes chr3R 11192621 intergenic not near genes chr3R 11192958 intergenic not near genes chr3R_17_11190001 chr3R_11190001 RAL-301_75b 1618 chr3R 11269453 11269472 chr3R 11269578 11269597 5 124 1.0 3.0 2.0 1.7 144 chr3R 11269453 3` UTR CR31386 - chr3R 11269525 3` UTR CR31386 - chr3R 11269597 3` UTR CR31386 - chr3R_5_11265001 chr3R_11265001 RAL-301_75b 1619 chr3R 11313230 11313261 chr3R 11313319 11313350 16 89 2.0 1.5 1.8 5.7 120 chr3R 11313230 intergenic not near genes chr3R 11313290 intergenic not near genes chr3R 11313350 intergenic not near genes chr3R_16_11310001 chr3R_11310001 RAL-301_75b 1620 chr3R 11342544 11342574 chr3R 11342618 11342650 12 76 1.0 1.5 1.2 5.5 106 chr3R 11342544 intron pros + chr3R 11342597 intron pros + chr3R 11342650 intron pros + chr3R_12_11340001 chr3R_11340001 RAL-301_75b 1621 chr3R 11379234 11379260 chr3R 11388389 11388415 roo 5 9155 2.5 3.5 3.0 1.2 9181 chr3R 11379234 intron pros + chr3R 11383824 intron pros + chr3R 11388415 intron pros + chr3R_5_11380001 chr3R_11380001 RAL-301_75b 1622 chr3R 11452078 11452101 chr3R 11452164 11452187 12 87 4.0 2.0 3.0 3.0 109 chr3R 11452078 intron CG17230 + chr3R 11452132 intron CG17230 + chr3R 11452187 intron CG17230 + chr3R_12_11450001 chr3R_11450001 RAL-301_75b 1623 chr3R 11455580 11455607 chr3R 11455706 11455732 7 126 5.5 4.0 4.8 1.2 152 chr3R 11455580 intron,intron CG17230 +,PGRP-LB - chr3R 11455656 intron,intron CG17230 +,PGRP-LB - chr3R 11455732 intron,intron CG17230 +,PGRP-LB - chr3R_7_11455001 chr3R_11455001 RAL-301_75b 1624 chr3R 11483446 11483473 chr3R 11483530 11483550 5 83 0.0 6.0 3.0 1.2 104 chr3R 11483446 intergenic not near genes chr3R 11483498 intergenic not near genes chr3R 11483550 intergenic not near genes chr3R_5_11480001 chr3R_11480001 RAL-301_75b 1625 chr3R 11664790 11664822 chr3R 11664882 11664913 17 91 1.0 2.0 1.5 6.8 123 chr3R 11664790 intron CG42327 + chr3R 11664852 intron CG42327 + chr3R 11664913 intron CG42327 + chr3R_17_11660001 chr3R_11660001 RAL-301_75b 1626 chr3R 11694727 11694744 chr3R 11694820 11694837 6 92 3.5 2.0 2.8 1.6 110 chr3R 11694727 intergenic Fer3 - chr3R 11694782 intergenic Fer3 - chr3R 11694837 intergenic not near genes chr3R_6_11690001 chr3R_11690001 RAL-301_75b 1627 chr3R 11708636 11708663 chr3R 11708844 11708871 4 208 1.5 3.0 2.2 1.2 235 chr3R 11708636 intergenic not near genes chr3R 11708754 intergenic not near genes chr3R 11708871 intergenic not near genes chr3R_4_11705001 chr3R_11705001 RAL-301_75b 1628 chr3R 11713492 11713525 chr3R 11713572 11713605 24 80 0.5 3.0 1.8 8.6 113 chr3R 11713492 intergenic not near genes chr3R 11713548 intergenic not near genes chr3R 11713605 intergenic not near genes chr3R_24_11710001 chr3R_11710001 RAL-301_75b 1629 chr3R 11728177 11728205 chr3R 11728258 11728286 6 81 0.0 1.0 0.5 4.0 109 chr3R 11728177 intron CG12594 + chr3R 11728232 intron CG12594 + chr3R 11728286 intron CG12594 + chr3R_6_11725001 chr3R_11725001 RAL-301_75b 1630 chr3R 11811089 11811125 chr3R 11811185 11811221 8 96 1.0 6.0 3.5 1.8 132 chr3R 11811089 5` UTR ClC-a - chr3R 11811155 intron ClC-a - chr3R 11811221 intron ClC-a - chr3R_8_11810001 chr3R_11810001 RAL-301_75b 1631 chr3R 11830350 11830355 chr3R 11830434 11830440 4 84 3.0 2.5 2.8 1.1 90 chr3R 11830350 intron CG6959 - chr3R 11830395 intron CG6959 - chr3R 11830440 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-301_75b 1632 chr3R 11841062 11841096 chr3R 11846253 11846284 BS 7 5190 3.0 5.0 4.0 1.4 5222 chr3R 11841062 intron CG6959 - chr3R 11843673 intron CG6959 - chr3R 11846284 intron CG6959 - chr3R_7_11840001 chr3R_11840001 RAL-301_75b 1633 chr3R 11919305 11919338 chr3R 11919393 11919426 7 87 3.5 2.0 2.8 1.8 121 chr3R 11919305 intron Cad87A - chr3R 11919366 intron Cad87A - chr3R 11919426 intron Cad87A - chr3R_7_11915001 chr3R_11915001 RAL-301_75b 1634 chr3R 11945384 11945398 chr3R 11945482 11945496 7 98 2.5 6.5 4.5 1.3 112 chr3R 11945384 intron Cad87A - chr3R 11945440 intron Cad87A - chr3R 11945496 intron Cad87A - chr3R_7_11945001 chr3R_11945001 RAL-301_75b 1635 chr3R 11994997 11995022 chr3R 11995077 11995102 7 80 4.0 2.5 3.2 1.7 105 chr3R 11994997 exon Tk - chr3R 11995050 exon Tk - chr3R 11995102 exon Tk - chr3R_7_11995001 chr3R_11995001 RAL-301_75b 1636 chr3R 12022886 12022916 chr3R 12025063 12025093 pogo 11 2177 1.0 7.5 4.2 2.1 2207 chr3R 12022886 intergenic not near genes chr3R 12023990 intergenic not near genes chr3R 12025093 intergenic not near genes chr3R_11_12020001 chr3R_12020001 RAL-301_75b 1637 chr3R 12081995 12082029 chr3R 12082071 12082105 23 76 3.5 0.5 2.0 7.7 110 chr3R 12081995 intron CG14741 - chr3R 12082050 intron CG14741 - chr3R 12082105 intron CG14741 - chr3R_23_12080001 chr3R_12080001 RAL-301_75b 1638 chr3R 12111899 12111913 chr3R 12111975 12111989 6 76 0.0 1.5 0.8 3.3 90 chr3R 12111899 intergenic dpr17 + chr3R 12111944 intergenic not near genes chr3R 12111989 intergenic not near genes chr3R_6_12110001 chr3R_12110001 RAL-301_75b 1639 chr3R 12183184 12183192 chr3R 12183267 12183278 6 84 4.5 4.5 4.5 1.1 94 chr3R 12183184 intergenic not near genes chr3R 12183231 intergenic not near genes chr3R 12183278 intergenic not near genes chr3R_6_12180001 chr3R_12180001 RAL-301_75b 1640 chr3R 12267857 12267886 chr3R 12267937 12267965 13 80 2.5 1.5 2.0 4.3 108 chr3R 12267857 intron svp + chr3R 12267911 intron svp + chr3R 12267965 intron svp + chr3R_13_12265001 chr3R_12265001 RAL-301_75b 1641 chr3R 12344133 12344157 chr3R 12344209 12344234 5 77 1.0 2.0 1.5 2.0 101 chr3R 12344133 intergenic not near genes chr3R 12344184 intergenic not near genes chr3R 12344234 intergenic not near genes chr3R_5_12340001 chr3R_12340001 RAL-301_75b 1642 chr3R 12396874 12396879 chr3R 12403841 12403845 4 6967 0.5 23.5 12.0 0.3 6971 chr3R 12396874 intron CG34402 + chr3R 12400360 intron,exon CG34402 +,lig3 - chr3R 12403845 exon Cyp9f2 - chr3R_4_12400001 chr3R_12400001 RAL-301_75b 1643 chr3R 12599010 12599031 chr3R 12599150 12599171 7 140 1.0 4.5 2.8 1.8 161 chr3R 12599010 intergenic not near genes chr3R 12599090 intergenic not near genes chr3R 12599171 intergenic not near genes chr3R_7_12595001 chr3R_12595001 RAL-301_75b 1644 chr3R 12725944 12725966 chr3R 12726049 12726071 4 104 1.0 1.5 1.2 1.8 127 chr3R 12725944 intergenic not near genes chr3R 12726008 intergenic not near genes chr3R 12726071 intergenic not near genes chr3R_4_12725001 chr3R_12725001 RAL-301_75b 1645 chr3R 12733478 12733504 chr3R 12733555 12733580 5 77 0.5 0.5 0.5 3.3 102 chr3R 12733478 intergenic not near genes chr3R 12733529 intergenic not near genes chr3R 12733580 intergenic not near genes chr3R_5_12730001 chr3R_12730001 RAL-301_75b 1646 chr3R 12739038 12739060 chr3R 12739111 12739136 10 76 1.5 2.0 1.8 3.6 98 chr3R 12739038 intergenic not near genes chr3R 12739087 intergenic not near genes chr3R 12739136 intergenic not near genes chr3R_10_12735001 chr3R_12735001 RAL-301_75b 1647 chr3R 12763125 12763155 chr3R 12763202 12763232 8 77 0.0 1.0 0.5 5.3 107 chr3R 12763125 intron beat-Vc - chr3R 12763178 intron beat-Vc - chr3R 12763232 intron beat-Vc - chr3R_8_12760001 chr3R_12760001 RAL-301_75b 1648 chr3R 12819028 12819046 chr3R 12819111 12819125 7 82 4.0 3.5 3.8 1.5 97 chr3R 12819028 intergenic not near genes chr3R 12819076 intergenic not near genes chr3R 12819125 intergenic not near genes chr3R_7_12815001 chr3R_12815001 RAL-301_75b 1649 chr3R 12866503 12866509 chr3R 12866653 12866660 5 150 4.0 6.5 5.2 0.8 157 chr3R 12866503 intergenic not near genes chr3R 12866582 intergenic not near genes chr3R 12866660 intergenic not near genes chr3R_5_12865001 chr3R_12865001 RAL-301_75b 1650 chr3R 12883797 12883816 chr3R 12883913 12883935 7 118 1.5 2.0 1.8 2.5 138 chr3R 12883797 intergenic not near genes chr3R 12883866 intergenic not near genes chr3R 12883935 intergenic not near genes chr3R_7_12880001 chr3R_12880001 RAL-301_75b 1651 chr3R 12920158 12920177 chr3R 12925361 12925380 copia 4 5203 7.0 9.5 8.2 0.4 5222 chr3R 12920158 intron beat-Vb + chr3R 12922769 intron beat-Vb + chr3R 12925380 intron beat-Vb + chr3R_4_12920001 chr3R_12920001 RAL-301_75b 1652 chr3R 13045798 13045803 chr3R 13053034 13053039 6 7237 28.0 23.0 25.5 0.2 7241 chr3R 13045798 exon Hsc70-2 + chr3R 13049418 3` UTR CG7966 - chr3R 13053039 intron pic + chr3R_6_13045001 chr3R_13045001 RAL-301_75b 1653 chr3R 13059962 13059970 chr3R 13060157 13060165 5 195 3.0 4.0 3.5 1.1 203 chr3R 13059962 intron sim + chr3R 13060064 intron sim + chr3R 13060165 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-301_75b 1654 chr3R 13067097 13067123 chr3R 13067173 13067199 10 76 0.0 2.0 1.0 5.0 102 chr3R 13067097 intron sim + chr3R 13067148 intron sim + chr3R 13067199 intron sim + chr3R_10_13065001 chr3R_13065001 RAL-301_75b 1655 chr3R 13120775 13120800 chr3R 13120852 13120877 7 76 1.0 0.5 0.8 3.9 102 chr3R 13120775 intron timeout + chr3R 13120826 intron timeout + chr3R 13120877 intron timeout + chr3R_7_13120001 chr3R_13120001 RAL-301_75b 1656 chr3R 13135833 13135850 chr3R 13138008 13138025 pogo 8 2175 4.0 3.5 3.8 1.7 2192 chr3R 13135833 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136929 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138025 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 RAL-301_75b 1657 chr3R 13143039 13143066 chr3R 13148615 13148642 mdg3 14 5576 1.0 1.0 1.0 7.0 5603 chr3R 13143039 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_14_13145001 chr3R_13145001 RAL-301_75b 1658 chr3R 13194097 13194124 chr3R 13194686 13194713 10 589 2.5 3.5 3.0 2.5 616 chr3R 13194097 intergenic not near genes chr3R 13194405 intergenic not near genes chr3R 13194713 intergenic not near genes chr3R_10_13190001 chr3R_13190001 RAL-301_75b 1659 chr3R 13195952 13195972 chr3R 13196046 13196067 4 95 5.5 1.0 3.2 1.0 115 chr3R 13195952 intergenic not near genes chr3R 13196010 intergenic not near genes chr3R 13196067 intergenic not near genes chr3R_4_13195001 chr3R_13195001 RAL-301_75b 1660 chr3R 7773344 7773344 chr3R 13217322 13217322 4 5443978 18.0 16.5 17.2 0.2 5443978 chr3R 7773344 intergenic not near genes chr3R 10495333 intergenic not near genes chr3R 13217322 intergenic not near genes chr3R_4_10495001 chr3R_10495001 RAL-301_75b 1661 chr3R 13391636 13391657 chr3R 13391714 13391735 11 78 6.0 1.5 3.8 2.3 99 chr3R 13391636 intron CCHa2 - chr3R 13391686 intron CCHa2 - chr3R 13391735 intron CCHa2 - chr3R_11_13390001 chr3R_13390001 RAL-301_75b 1662 chr3R 13394670 13394706 chr3R 13395018 13395053 9 348 1.0 2.0 1.5 3.6 383 chr3R 13394670 intron CCHa2 - chr3R 13394862 intron CCHa2 - chr3R 13395053 intron CCHa2 - chr3R_9_13390001 chr3R_13390001 RAL-301_75b 1663 chr3R 13401015 13401046 chr3R 13401106 13401137 7 91 0.5 2.5 1.5 2.8 122 chr3R 13401015 intron CG9796 - chr3R 13401076 intron CG9796 - chr3R 13401137 intron CG9796 - chr3R_7_13400001 chr3R_13400001 RAL-301_75b 1664 chr3R 13596043 13596060 chr3R 13596125 13596142 10 82 2.0 4.0 3.0 2.5 99 chr3R 13596043 intergenic not near genes chr3R 13596092 intergenic not near genes chr3R 13596142 intergenic not near genes chr3R_10_13595001 chr3R_13595001 RAL-301_75b 1665 chr3R 13598086 13598106 chr3R 13598164 13598184 9 78 6.5 2.5 4.5 1.6 98 chr3R 13598086 intergenic not near genes chr3R 13598135 intergenic not near genes chr3R 13598184 intergenic not near genes chr3R_9_13595001 chr3R_13595001 RAL-301_75b 1666 chr3R 13672939 13672973 chr3R 13673017 13673051 18 78 5.5 2.0 3.8 3.8 112 chr3R 13672939 intron Task6 - chr3R 13672995 intron Task6 - chr3R 13673051 intron Task6 - chr3R_18_13670001 chr3R_13670001 RAL-301_75b 1667 chr3R 13745429 13745440 chr3R 13745547 13745557 7 118 5.0 0.0 2.5 2.0 128 chr3R 13745429 intron CG34383 + chr3R 13745493 intron CG34383 + chr3R 13745557 intron CG34383 + chr3R_7_13745001 chr3R_13745001 RAL-301_75b 1668 chr3R 13763304 13763329 chr3R 13763384 13763409 17 80 3.5 0.5 2.0 5.7 105 chr3R 13763304 3` UTR CG34383 + chr3R 13763356 3` UTR CG34383 + chr3R 13763409 3` UTR CG34383 + chr3R_17_13760001 chr3R_13760001 RAL-301_75b 1669 chr3R 13789536 13789564 chr3R 13789616 13789644 9 80 0.0 1.5 0.8 5.0 108 chr3R 13789536 intergenic not near genes chr3R 13789590 intergenic not near genes chr3R 13789644 intergenic not near genes chr3R_9_13785001 chr3R_13785001 RAL-301_75b 1670 chr3R 13835605 13835624 chr3R 13835697 13835716 5 92 0.0 4.5 2.2 1.6 111 chr3R 13835605 intron Nsf2 - chr3R 13835660 intron Nsf2 - chr3R 13835716 intron Nsf2 - chr3R_5_13835001 chr3R_13835001 RAL-301_75b 1671 chr3R 13846177 13846205 chr3R 13846274 13846303 14 98 1.5 1.0 1.2 6.4 126 chr3R 13846177 intergenic not near genes chr3R 13846240 intergenic not near genes chr3R 13846303 intergenic not near genes chr3R_14_13845001 chr3R_13845001 RAL-301_75b 1672 chr3R 13863679 13863714 chr3R 13863767 13863802 26 88 3.5 6.5 5.0 4.3 123 chr3R 13863679 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863802 intergenic not near genes chr3R_26_13860001 chr3R_13860001 RAL-301_75b 1673 chr3R 14037583 14037588 chr3R 14037664 14037669 6 81 6.0 1.0 3.5 1.3 86 chr3R 14037583 intergenic not near genes chr3R 14037626 intergenic not near genes chr3R 14037669 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-301_75b 1674 chr3R 14067142 14067151 chr3R 14067221 14067230 4 79 4.5 1.0 2.8 1.1 88 chr3R 14067142 exon foxo + chr3R 14067186 intron foxo + chr3R 14067230 intron foxo + chr3R_4_14065001 chr3R_14065001 RAL-301_75b 1675 chr3R 14083400 14083434 chr3R 14083501 14083535 6 101 1.0 0.0 0.5 4.0 135 chr3R 14083400 intron foxo + chr3R 14083468 intron foxo + chr3R 14083535 intron foxo + chr3R_6_14080001 chr3R_14080001 RAL-301_75b 1676 chr3R 14109095 14109112 chr3R 14109176 14109194 4 81 2.5 0.0 1.2 1.8 99 chr3R 14109095 intergenic CR44237 -,Or88a + chr3R 14109144 intergenic CR44237 -,Or88a + chr3R 14109194 intergenic CR44237 -,Or88a + chr3R_4_14105001 chr3R_14105001 RAL-301_75b 1677 chr3R 14117436 14117462 chr3R 14117512 14117538 10 76 6.0 2.0 4.0 2.0 102 chr3R 14117436 intron Kif19A - chr3R 14117487 intron Kif19A - chr3R 14117538 intron Kif19A - chr3R_10_14115001 chr3R_14115001 RAL-301_75b 1678 chr3R 14180815 14180837 chr3R 14185579 14185602 F-element 16 4765 3.0 4.0 3.5 3.6 4787 chr3R 14180815 intron Dop1R1 - chr3R 14183208 intron Dop1R1 - chr3R 14185602 intron Dop1R1 - chr3R_16_14180001 chr3R_14180001 RAL-301_75b 1679 chr3R 14217426 14217459 chr3R 14217502 14217535 19 76 1.5 1.5 1.5 7.6 109 chr3R 14217426 intron CG9649 - chr3R 14217480 intron CG9649 - chr3R 14217535 exon CG9649 - chr3R_19_14215001 chr3R_14215001 RAL-301_75b 1680 chr3R 14246399 14246417 chr3R 14247892 14247913 jockey 8 1495 0.5 4.0 2.2 2.5 1514 chr3R 14246399 intergenic not near genes chr3R 14247156 intergenic not near genes chr3R 14247913 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-301_75b 1681 chr3R 14295533 14295560 chr3R 14295614 14295643 20 82 0.0 4.0 2.0 6.7 110 chr3R 14295533 intron CG12207 + chr3R 14295588 intron CG12207 + chr3R 14295643 intron CG12207 + chr3R_20_14295001 chr3R_14295001 RAL-301_75b 1682 chr3R 14343301 14343337 chr3R 14343461 14343497 18 160 1.0 1.0 1.0 9.0 196 chr3R 14343301 intron NK7.1 - chr3R 14343399 intron NK7.1 - chr3R 14343497 intron NK7.1 - chr3R_18_14340001 chr3R_14340001 RAL-301_75b 1683 chr3R 14541408 14541434 chr3R 14541511 14541537 7 103 3.0 1.5 2.2 2.2 129 chr3R 14541408 intron Pde6 - chr3R 14541472 intron Pde6 - chr3R 14541537 intron Pde6 - chr3R_7_14540001 chr3R_14540001 RAL-301_75b 1684 chr3R 14624716 14624739 chr3R 14624879 14624902 7 163 1.5 3.0 2.2 2.2 186 chr3R 14624716 intron put - chr3R 14624809 intron put - chr3R 14624902 intron put - chr3R_7_14620001 chr3R_14620001 RAL-301_75b 1685 chr3R 14704393 14704410 chr3R 14704468 14704485 5 76 3.0 0.0 1.5 2.0 92 chr3R 14704393 intron kibra - chr3R 14704439 intron kibra - chr3R 14704485 intron kibra - chr3R_5_14700001 chr3R_14700001 RAL-301_75b 1686 chr3R 14738192 14738214 chr3R 14738416 14738438 4 224 0.5 7.0 3.8 0.8 246 chr3R 14738192 intron eff - chr3R 14738315 intron eff - chr3R 14738438 intron eff - chr3R_4_14735001 chr3R_14735001 RAL-301_75b 1687 chr3R 14760524 14760543 chr3R 14760615 14760634 4 91 2.0 0.0 1.0 2.0 110 chr3R 14760524 intron jvl + chr3R 14760579 intron jvl + chr3R 14760634 intron jvl + chr3R_4_14760001 chr3R_14760001 RAL-301_75b 1688 chr3R 14770383 14770390 chr3R 14770948 14770954 9 565 3.5 1.0 2.2 2.8 571 chr3R 14770383 intron jvl + chr3R 14770668 intron jvl + chr3R 14770954 intron jvl + chr3R_9_14770001 chr3R_14770001 RAL-301_75b 1689 chr3R 14995716 14995727 chr3R 14995801 14995810 6 84 3.5 4.5 4.0 1.2 94 chr3R 14995716 intergenic not near genes chr3R 14995763 intergenic not near genes chr3R 14995810 intergenic not near genes chr3R_6_14995001 chr3R_14995001 RAL-301_75b 1690 chr3R 15040864 15040893 chr3R 15040989 15041018 15 125 1.0 2.5 1.8 5.4 154 chr3R 15040864 intergenic not near genes chr3R 15040941 intergenic not near genes chr3R 15041018 intergenic not near genes chr3R_15_15040001 chr3R_15040001 RAL-301_75b 1691 chr3R 15041411 15041419 chr3R 15045194 15045203 Doc 5 3784 0.0 4.0 2.0 1.7 3792 chr3R 15041411 intergenic not near genes chr3R 15043307 intergenic not near genes chr3R 15045203 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-301_75b 1692 chr3R 15059466 15059478 chr3R 15059553 15059565 6 87 0.0 5.0 2.5 1.7 99 chr3R 15059466 intron dpr9 - chr3R 15059516 intron dpr9 - chr3R 15059565 intron dpr9 - chr3R_6_15055001 chr3R_15055001 RAL-301_75b 1693 chr3R 15079810 15079839 chr3R 15080051 15080080 pogo 8 241 3.0 1.0 2.0 2.7 270 chr3R 15079810 3` UTR CG6966 - chr3R 15079945 3` UTR CG6966 - chr3R 15080080 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RAL-301_75b 1694 chr3R 15084154 15084174 chr3R 15084286 15084306 8 132 2.0 6.5 4.2 1.5 152 chr3R 15084154 intron CG6966 - chr3R 15084230 intron CG6966 - chr3R 15084306 intron CG6966 - chr3R_8_15080001 chr3R_15080001 RAL-301_75b 1695 chr3R 15114917 15114936 chr3R 15114994 15115013 6 77 3.0 2.5 2.8 1.6 96 chr3R 15114917 intron CG42788 - chr3R 15114965 intron CG42788 - chr3R 15115013 intron CG42788 - chr3R_6_15110001 chr3R_15110001 RAL-301_75b 1696 chr3R 15127780 15127808 chr3R 15127860 15127886 9 80 4.0 3.0 3.5 2.0 106 chr3R 15127780 intron CG42788 - chr3R 15127833 intron CG42788 - chr3R 15127886 intron CG42788 - chr3R_9_15125001 chr3R_15125001 RAL-301_75b 1697 chr3R 15132062 15132082 chr3R 15135119 15135142 Juan 13 3059 12.5 10.0 11.2 1.1 3080 chr3R 15132062 intergenic CG42788 - chr3R 15133602 intergenic not near genes chr3R 15135142 3` UTR CG6912 - chr3R_13_15130001 chr3R_15130001 RAL-301_75b 1698 chr3R 15162554 15162568 chr3R 15167320 15167335 F-element 6 4766 4.5 3.0 3.8 1.2 4781 chr3R 15162554 intron Gyc88E + chr3R 15164944 intron Gyc88E + chr3R 15167335 intron Gyc88E + chr3R_6_15160001 chr3R_15160001 RAL-301_75b 1699 chr3R 15167809 15167826 chr3R 15167965 15167983 5 157 2.5 7.0 4.8 0.9 174 chr3R 15167809 intron Gyc88E + chr3R 15167896 intron Gyc88E + chr3R 15167983 intron Gyc88E + chr3R_5_15165001 chr3R_15165001 RAL-301_75b 1700 chr3R 15190652 15190683 chr3R 15190777 15190807 13 125 1.5 3.0 2.2 4.1 155 chr3R 15190652 3` UTR Gyc88E + chr3R 15190730 3` UTR Gyc88E + chr3R 15190807 3` UTR Gyc88E + chr3R_13_15190001 chr3R_15190001 RAL-301_75b 1701 chr3R 15265404 15265427 chr3R 15265489 15265512 4 85 2.0 1.5 1.8 1.4 108 chr3R 15265404 intergenic Set +,Oscp + chr3R 15265458 intergenic Oscp +,Set + chr3R 15265512 intergenic Oscp +,Set + chr3R_4_15265001 chr3R_15265001 RAL-301_75b 1702 chr3R 15406134 15406167 chr3R 15406214 15406248 6 81 5.5 0.5 3.0 1.5 114 chr3R 15406134 intron CG6125 - chr3R 15406191 intron CG6125 - chr3R 15406248 intron CG6125 - chr3R_6_15405001 chr3R_15405001 RAL-301_75b 1703 chr3R 15517603 15517610 chr3R 15517683 15517693 5 82 6.5 2.5 4.5 0.9 90 chr3R 15517603 intergenic not near genes chr3R 15517648 intergenic not near genes chr3R 15517693 intergenic not near genes chr3R_5_15515001 chr3R_15515001 RAL-301_75b 1704 chr3R 15601163 15601195 chr3R 15608685 15608717 412 21 7522 5.5 1.0 3.2 5.0 7554 chr3R 15601163 intergenic not near genes chr3R 15604940 intergenic not near genes chr3R 15608717 intergenic not near genes chr3R_21_15600001 chr3R_15600001 RAL-301_75b 1705 chr3R 15618732 15618762 chr3R 15626205 15626236 blood 12 7474 1.0 5.5 3.2 2.9 7504 chr3R 15618732 intergenic not near genes chr3R 15622484 intergenic not near genes chr3R 15626236 intergenic not near genes chr3R_12_15620001 chr3R_15620001 RAL-301_75b 1706 chr3R 15646789 15646799 chr3R 15646872 15646882 5 83 4.5 1.0 2.8 1.3 93 chr3R 15646789 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646882 intergenic not near genes chr3R_5_15645001 chr3R_15645001 RAL-301_75b 1707 chr3R 15691194 15691329 chr3R 15691299 15691416 12 88 0.0 0.0 0.0 12.0 222 chr3R 15691194 intergenic not near genes chr3R 15691305 intergenic not near genes chr3R 15691416 intergenic not near genes chr3R_12_15690001 chr3R_15690001 RAL-301_75b 1708 chr3R 15779655 15779669 chr3R 15779734 15779750 9 81 4.0 4.5 4.2 1.7 95 chr3R 15779655 intergenic CG5614 + chr3R 15779702 intergenic CG5614 + chr3R 15779750 intergenic CG5614 + chr3R_9_15775001 chr3R_15775001 RAL-301_75b 1709 chr3R 15790144 15790288 chr3R 15790248 15790406 21 114 9.0 15.0 12.0 1.6 262 chr3R 15790144 exon c(3)G - chr3R 15790275 exon c(3)G - chr3R 15790406 exon c(3)G - chr3R_21_15790001 chr3R_15790001 RAL-301_75b 1710 chr3R 15790380 15790406 chr3R 15790586 15790612 11 206 16.0 25.0 20.5 0.5 232 chr3R 15790380 exon c(3)G - chr3R 15790496 exon c(3)G - chr3R 15790612 exon c(3)G - chr3R_11_15790001 chr3R_15790001 RAL-301_75b 1711 chr3R 15790836 15790873 chr3R 15790952 15790988 13 116 18.0 17.0 17.5 0.7 152 chr3R 15790836 exon c(3)G - chr3R 15790912 intron c(3)G - chr3R 15790988 exon c(3)G - chr3R_13_15790001 chr3R_15790001 RAL-301_75b 1712 chr3R 15808067 15808095 chr3R 15808162 15808190 12 94 1.5 8.5 5.0 2.0 123 chr3R 15808067 intron alpha-Man-IIb + chr3R 15808128 intron alpha-Man-IIb + chr3R 15808190 intron alpha-Man-IIb + chr3R_12_15805001 chr3R_15805001 RAL-301_75b 1713 chr3R 15813331 15813354 chr3R 15813415 15813439 7 85 5.5 4.5 5.0 1.2 108 chr3R 15813331 intron alpha-Man-IIb + chr3R 15813385 intron alpha-Man-IIb + chr3R 15813439 intron alpha-Man-IIb + chr3R_7_15810001 chr3R_15810001 RAL-301_75b 1714 chr3R 15878601 15878635 chr3R 15878681 15878715 7 80 3.0 1.5 2.2 2.2 114 chr3R 15878601 intergenic not near genes chr3R 15878658 intergenic not near genes chr3R 15878715 intergenic not near genes chr3R_7_15875001 chr3R_15875001 RAL-301_75b 1715 chr3R 15942053 15942082 chr3R 15942810 15942839 8 757 2.5 1.5 2.0 2.7 786 chr3R 15942053 intron Sap47 + chr3R 15942446 intron Sap47 + chr3R 15942839 intron Sap47 + chr3R_8_15940001 chr3R_15940001 RAL-301_75b 1716 chr3R 16073440 16073463 chr3R 16073544 16073567 5 104 6.0 0.0 3.0 1.2 127 chr3R 16073440 intron Mhcl - chr3R 16073504 intron Mhcl - chr3R 16073567 intron Mhcl - chr3R_5_16070001 chr3R_16070001 RAL-301_75b 1717 chr3R 16128443 16128461 chr3R 16128528 16128546 6 85 4.5 3.0 3.8 1.2 103 chr3R 16128443 intron Sb + chr3R 16128494 intron Sb + chr3R 16128546 intron Sb + chr3R_6_16125001 chr3R_16125001 RAL-301_75b 1718 chr3R 16134042 16134069 chr3R 16134122 16134149 6 80 2.5 0.5 1.5 2.4 107 chr3R 16134042 intron Sb + chr3R 16134096 intron Sb + chr3R 16134149 intron Sb + chr3R_6_16130001 chr3R_16130001 RAL-301_75b 1719 chr3R 16308822 16308854 chr3R 16309275 16309307 15 453 2.5 0.5 1.5 6.0 485 chr3R 16308822 intergenic Zip89B + chr3R 16309064 intergenic Zip89B + chr3R 16309307 intergenic not near genes chr3R_15_16305001 chr3R_16305001 RAL-301_75b 1720 chr3R 16472583 16472605 chr3R 16472659 16472674 6 75 3.5 6.0 4.8 1.0 91 chr3R 16472583 intergenic Gyc-89Da + chr3R 16472628 5` UTR Gyc-89Da + chr3R 16472674 5` UTR Gyc-89Da + chr3R_6_16470001 chr3R_16470001 RAL-301_75b 1721 chr3R 16732151 16732182 chr3R 16732247 16732278 12 96 0.0 2.5 1.2 5.5 127 chr3R 16732151 intron Ubx - chr3R 16732214 intron Ubx - chr3R 16732278 intron Ubx - chr3R_12_16730001 chr3R_16730001 RAL-301_75b 1722 chr3R 16734875 16734887 chr3R 16734958 16734970 5 83 0.0 0.5 0.2 4.2 95 chr3R 16734875 intergenic Ubx - chr3R 16734922 intergenic Ubx - chr3R 16734970 intergenic not near genes chr3R_5_16730001 chr3R_16730001 RAL-301_75b 1723 chr3R 16756318 16756350 chr3R 16762509 16762541 diver 9 6191 3.5 1.0 2.2 2.8 6223 chr3R 16756318 intron bxd - chr3R 16759430 intron bxd - chr3R 16762541 intron bxd - chr3R_9_16755001 chr3R_16755001 RAL-301_75b 1724 chr3R 16794295 16794324 chr3R 16794385 16794413 7 90 1.0 3.0 2.0 2.3 118 chr3R 16794295 intergenic not near genes chr3R 16794354 intergenic not near genes chr3R 16794413 intergenic not near genes chr3R_7_16790001 chr3R_16790001 RAL-301_75b 1725 chr3R 16806205 16806218 chr3R 16806290 16806303 5 85 0.0 3.5 1.8 1.8 98 chr3R 16806205 intergenic not near genes chr3R 16806254 intergenic not near genes chr3R 16806303 intergenic not near genes chr3R_5_16805001 chr3R_16805001 RAL-301_75b 1726 chr3R 16831576 16831595 chr3R 16831662 16831682 11 87 2.5 5.5 4.0 2.2 106 chr3R 16831576 3` UTR iab-8 - chr3R 16831629 3` UTR iab-8 - chr3R 16831682 3` UTR iab-8 - chr3R_11_16830001 chr3R_16830001 RAL-301_75b 1727 chr3R 17121523 17121556 chr3R 17121718 17121751 10 195 1.0 1.5 1.2 4.5 228 chr3R 17121523 intron cher - chr3R 17121637 intron,exon cher -,CG42779 + chr3R 17121751 intron,exon cher -,CG42779 + chr3R_10_17120001 chr3R_17120001 RAL-301_75b 1728 chr3R 17259527 17259552 chr3R 17259605 17259631 8 79 2.0 5.5 3.8 1.7 104 chr3R 17259527 intron beat-IIb - chr3R 17259579 intron beat-IIb - chr3R 17259631 intron beat-IIb - chr3R_8_17255001 chr3R_17255001 RAL-301_75b 1729 chr3R 17294665 17294675 chr3R 17295093 17295103 BS 4 428 2.5 0.0 1.2 1.8 438 chr3R 17294665 intergenic not near genes chr3R 17294884 intergenic not near genes chr3R 17295103 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-301_75b 1730 chr3R 17312825 17312848 chr3R 17312910 17312931 5 85 4.0 5.0 4.5 0.9 106 chr3R 17312825 intergenic not near genes chr3R 17312878 intergenic not near genes chr3R 17312931 intergenic not near genes chr3R_5_17310001 chr3R_17310001 RAL-301_75b 1731 chr3R 17346700 17346709 chr3R 17348263 17348272 F-element 4 1563 4.0 10.5 7.2 0.5 1572 chr3R 17346700 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348272 intron beat-IIa - chr3R_4_17345001 chr3R_17345001 RAL-301_75b 1732 chr3R 17355489 17355515 chr3R 17355567 17355592 10 77 5.0 0.0 2.5 2.9 103 chr3R 17355489 intron beat-IIa - chr3R 17355540 intron beat-IIa - chr3R 17355592 intron beat-IIa - chr3R_10_17355001 chr3R_17355001 RAL-301_75b 1733 chr3R 17360167 17360171 chr3R 17360249 17360253 4 82 3.0 4.5 3.8 0.8 86 chr3R 17360167 intron beat-IIa - chr3R 17360210 intron beat-IIa - chr3R 17360253 intron beat-IIa - chr3R_4_17360001 chr3R_17360001 RAL-301_75b 1734 chr3R 17396682 17396712 chr3R 17396798 17396828 11 116 28.5 28.5 28.5 0.4 146 chr3R 17396682 3` UTR Sur-8 - chr3R 17396755 3` UTR Sur-8 - chr3R 17396828 3` UTR Sur-8 - chr3R_11_17395001 chr3R_17395001 RAL-301_75b 1735 chr3R 17461209 17461232 chr3R 17461290 17461314 15 82 3.5 1.5 2.5 4.3 105 chr3R 17461209 intergenic not near genes chr3R 17461262 intergenic not near genes chr3R 17461314 intergenic not near genes chr3R_15_17460001 chr3R_17460001 RAL-301_75b 1736 chr3R 17463157 17463180 chr3R 17463242 17463265 8 85 3.0 1.0 2.0 2.7 108 chr3R 17463157 intergenic not near genes chr3R 17463211 intergenic not near genes chr3R 17463265 intergenic not near genes chr3R_8_17460001 chr3R_17460001 RAL-301_75b 1737 chr3R 17524921 17524929 chr3R 17525001 17525009 6 79 0.0 5.5 2.8 1.6 88 chr3R 17524921 intergenic not near genes chr3R 17524965 intergenic not near genes chr3R 17525009 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-301_75b 1738 chr3R 17591303 17591326 chr3R 17591737 17591762 F-element 10 436 3.5 5.5 4.5 1.8 459 chr3R 17591303 intergenic not near genes chr3R 17591532 intergenic not near genes chr3R 17591762 intergenic not near genes chr3R_10_17590001 chr3R_17590001 RAL-301_75b 1739 chr3R 17725072 17725086 chr3R 17725166 17725180 6 94 4.0 0.0 2.0 2.0 108 chr3R 17725072 intergenic Atg8b - chr3R 17725126 intergenic Atg8b - chr3R 17725180 intergenic Atg8b - chr3R_6_17725001 chr3R_17725001 RAL-301_75b 1740 chr3R 17823197 17823233 chr3R 17823273 17823310 15 77 1.5 3.0 2.2 4.7 113 chr3R 17823197 intron tinc + chr3R 17823254 intron tinc + chr3R 17823310 intron tinc + chr3R_15_17820001 chr3R_17820001 RAL-301_75b 1741 chr3R 17845206 17845220 chr3R 17845283 17845297 7 77 3.5 7.5 5.5 1.1 91 chr3R 17845206 intron tinc + chr3R 17845252 intron tinc + chr3R 17845297 intron tinc + chr3R_7_17845001 chr3R_17845001 RAL-301_75b 1742 chr3R 17895345 17895374 chr3R 17895433 17895465 6 89 0.5 0.0 0.2 5.0 120 chr3R 17895345 intron Rim - chr3R 17895405 intron Rim - chr3R 17895465 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-301_75b 1743 chr3R 17899098 17899109 chr3R 17899176 17899187 10 78 6.0 2.0 4.0 2.0 89 chr3R 17899098 intron Rim - chr3R 17899142 intron Rim - chr3R 17899187 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-301_75b 1744 chr3R 17925856 17925889 chr3R 17927322 17927356 hobo 22 1466 3.0 4.5 3.8 4.6 1500 chr3R 17925856 intron cpo + chr3R 17926606 intron cpo + chr3R 17927356 intron cpo + chr3R_22_17925001 chr3R_17925001 RAL-301_75b 1745 chr3R 18032785 18032802 chr3R 18040458 18040475 opus 7 7672 0.0 1.5 0.8 3.9 7690 chr3R 18032785 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040475 intergenic not near genes chr3R_7_18035001 chr3R_18035001 RAL-301_75b 1746 chr3R 18068009 18068015 chr3R 18068091 18068097 6 82 0.0 4.0 2.0 2.0 88 chr3R 18068009 intergenic not near genes chr3R 18068053 intergenic not near genes chr3R 18068097 intergenic not near genes chr3R_6_18065001 chr3R_18065001 RAL-301_75b 1747 chr3R 18078155 18078181 chr3R 18078234 18078260 10 78 1.5 6.5 4.0 2.0 105 chr3R 18078155 intergenic not near genes chr3R 18078208 intergenic not near genes chr3R 18078260 intergenic not near genes chr3R_10_18075001 chr3R_18075001 RAL-301_75b 1748 chr3R 18101382 18101385 chr3R 18101458 18101458 4 75 8.0 9.5 8.8 0.4 76 chr3R 18101382 intron sr + chr3R 18101420 intron sr + chr3R 18101458 intron sr + chr3R_4_18100001 chr3R_18100001 RAL-301_75b 1749 chr3R 18108246 18108266 chr3R 18108340 18108360 7 95 1.0 4.5 2.8 1.8 114 chr3R 18108246 intron sr + chr3R 18108303 intron sr + chr3R 18108360 intron sr + chr3R_7_18105001 chr3R_18105001 RAL-301_75b 1750 chr3R 18142490 18142503 chr3R 18142571 18142584 6 80 2.5 3.0 2.8 1.6 94 chr3R 18142490 intergenic not near genes chr3R 18142537 intergenic not near genes chr3R 18142584 intergenic not near genes chr3R_6_18140001 chr3R_18140001 RAL-301_75b 1751 chr3R 18143580 18143588 chr3R 18143669 18143674 6 88 2.5 4.5 3.5 1.3 94 chr3R 18143580 intergenic not near genes chr3R 18143627 intergenic not near genes chr3R 18143674 intergenic not near genes chr3R_6_18140001 chr3R_18140001 RAL-301_75b 1752 chr3R 18281400 18281435 chr3R 18281476 18281511 10 76 0.5 2.5 1.5 4.0 111 chr3R 18281400 intron eIF-1A + chr3R 18281456 intron eIF-1A + chr3R 18281511 intron eIF-1A + chr3R_10_18280001 chr3R_18280001 RAL-301_75b 1753 chr3R 18352575 18352609 chr3R 18352668 18352702 8 93 2.5 1.0 1.8 2.9 127 chr3R 18352575 intron CG15803 - chr3R 18352638 intron CG15803 - chr3R 18352702 intron CG15803 - chr3R_8_18350001 chr3R_18350001 RAL-301_75b 1754 chr3R 18449405 18449421 chr3R 18449482 18449497 21 77 1.0 9.5 5.2 3.4 92 chr3R 18449405 intron fru - chr3R 18449451 intron fru - chr3R 18449497 intron fru - chr3R_21_18445001 chr3R_18445001 RAL-301_75b 1755 chr3R 18501599 18501623 chr3R 18501680 18501704 10 81 2.0 5.0 3.5 2.2 105 chr3R 18501599 intron fru - chr3R 18501652 intron fru - chr3R 18501704 intron fru - chr3R_10_18500001 chr3R_18500001 RAL-301_75b 1756 chr3R 18528377 18528399 chr3R 18528464 18528486 14 87 2.5 2.5 2.5 4.0 109 chr3R 18528377 intron fru - chr3R 18528432 intron fru - chr3R 18528486 intron fru - chr3R_14_18525001 chr3R_18525001 RAL-301_75b 1757 chr3R 18579575 18579586 chr3R 18579652 18579663 8 77 5.0 0.0 2.5 2.3 88 chr3R 18579575 intron,intron CG7694 +,fray + chr3R 18579619 intron,intron CG7694 +,fray + chr3R 18579663 intron,intron CG7694 +,fray + chr3R_8_18575001 chr3R_18575001 RAL-301_75b 1758 chr3R 18606503 18606533 chr3R 18610735 18610765 F-element 7 4232 3.0 5.5 4.2 1.3 4262 chr3R 18606503 intron,intron qin +,CG14304 - chr3R 18608634 intron,intron qin +,CG14304 - chr3R 18610765 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 RAL-301_75b 1759 chr3R 18622780 18622804 chr3R 18622856 18622880 11 76 6.0 0.5 3.2 2.6 100 chr3R 18622780 intron qin + chr3R 18622830 intron qin + chr3R 18622880 intron qin + chr3R_11_18620001 chr3R_18620001 RAL-301_75b 1760 chr3R 18766776 18766806 chr3R 18766854 18766884 4 78 2.5 0.5 1.5 1.6 108 chr3R 18766776 intron CG7720 - chr3R 18766830 intron CG7720 - chr3R 18766884 intron CG7720 - chr3R_4_18765001 chr3R_18765001 RAL-301_75b 1761 chr3R 18781693 18781718 chr3R 18781769 18781794 7 76 3.0 0.0 1.5 2.8 101 chr3R 18781693 intron CG7720 - chr3R 18781744 intron CG7720 - chr3R 18781794 intron CG7720 - chr3R_7_18780001 chr3R_18780001 RAL-301_75b 1762 chr3R 18812074 18812104 chr3R 18812152 18812179 10 78 0.0 2.0 1.0 5.0 105 chr3R 18812074 intron CG18208 - chr3R 18812126 intron CG18208 - chr3R 18812179 intron CG18208 - chr3R_10_18810001 chr3R_18810001 RAL-301_75b 1763 chr3R 18820519 18820544 chr3R 18820741 18820766 16 222 2.5 2.5 2.5 4.6 247 chr3R 18820519 intron CG18208 - chr3R 18820642 intron CG18208 - chr3R 18820766 intron CG18208 - chr3R_16_18820001 chr3R_18820001 RAL-301_75b 1764 chr3R 18839812 18839832 chr3R 18839896 18839913 9 84 6.0 3.5 4.8 1.6 101 chr3R 18839812 intron CG18208 - chr3R 18839862 intron CG18208 - chr3R 18839913 intron CG18208 - chr3R_9_18835001 chr3R_18835001 RAL-301_75b 1765 chr3R 18993917 18993940 chr3R 18994002 18994025 7 85 3.0 2.5 2.8 1.8 108 chr3R 18993917 intron gukh + chr3R 18993971 intron gukh + chr3R 18994025 intron gukh + chr3R_7_18990001 chr3R_18990001 RAL-301_75b 1766 chr3R 19077221 19077247 chr3R 19077538 19077564 10 316 3.5 2.5 3.0 2.5 343 chr3R 19077221 intron cdi - chr3R 19077392 intron cdi - chr3R 19077564 intron cdi - chr3R_10_19075001 chr3R_19075001 RAL-301_75b 1767 chr3R 19112999 19113032 chr3R 19113105 19113138 9 105 0.5 1.5 1.0 4.5 139 chr3R 19112999 intron CG6040 + chr3R 19113068 intron CG6040 + chr3R 19113138 intron CG6040 + chr3R_9_19110001 chr3R_19110001 RAL-301_75b 1768 chr3R 19117065 19117073 chr3R 19117209 19117216 4 144 6.0 0.0 3.0 1.0 151 chr3R 19117065 intron CG6040 + chr3R 19117140 intron CG6040 + chr3R 19117216 intron CG6040 + chr3R_4_19115001 chr3R_19115001 RAL-301_75b 1769 chr3R 19139777 19139804 chr3R 19139872 19139899 10 95 4.0 4.0 4.0 2.0 122 chr3R 19139777 3` UTR Ppcs - chr3R 19139838 3` UTR Ppcs - chr3R 19139899 3` UTR Ppcs - chr3R_10_19135001 chr3R_19135001 RAL-301_75b 1770 chr3R 19248878 19248900 chr3R 19248957 19248980 10 80 2.5 0.0 1.2 4.5 102 chr3R 19248878 intergenic not near genes chr3R 19248929 intergenic not near genes chr3R 19248980 intergenic not near genes chr3R_10_19245001 chr3R_19245001 RAL-301_75b 1771 chr3R 19252028 19252032 chr3R 19252115 19252122 5 89 1.5 2.0 1.8 1.8 94 chr3R 19252028 intergenic not near genes chr3R 19252075 intergenic not near genes chr3R 19252122 intergenic not near genes chr3R_5_19250001 chr3R_19250001 RAL-301_75b 1772 chr3R 19276930 19276947 chr3R 19277010 19277027 8 80 4.0 4.0 4.0 1.6 97 chr3R 19276930 intergenic not near genes chr3R 19276978 intergenic not near genes chr3R 19277027 intergenic not near genes chr3R_8_19275001 chr3R_19275001 RAL-301_75b 1773 chr3R 19431113 19431124 chr3R 19431348 19431359 12 235 1.0 7.0 4.0 2.4 246 chr3R 19431113 intron CG31221 + chr3R 19431236 intron CG31221 + chr3R 19431359 intron CG31221 + chr3R_12_19430001 chr3R_19430001 RAL-301_75b 1774 chr3R 19430633 19430663 chr3R 19434905 19434935 9 4272 12.5 26.5 19.5 0.4 4302 chr3R 19430633 intron CG31221 + chr3R 19432784 intron CG31221 + chr3R 19434935 intron CG31221 + chr3R_9_19430001 chr3R_19430001 RAL-301_75b 1775 chr3R 19602569 19602601 chr3R 19602649 19602681 9 80 1.0 0.0 0.5 6.0 112 chr3R 19602569 exon CG7333 + chr3R 19602625 3` UTR CG7333 + chr3R 19602681 intergenic CG7333 + chr3R_9_19600001 chr3R_19600001 RAL-301_75b 1776 chr3R 19633293 19633321 chr3R 19633379 19633407 5 85 0.0 1.0 0.5 3.3 114 chr3R 19633293 intergenic subdued - chr3R 19633350 intergenic subdued - chr3R 19633407 intergenic subdued - chr3R_5_19630001 chr3R_19630001 RAL-301_75b 1777 chr3R 19827527 19827554 chr3R 19827613 19827640 4 86 1.0 1.0 1.0 2.0 113 chr3R 19827527 intron bnl - chr3R 19827584 intron bnl - chr3R 19827640 intron bnl - chr3R_4_19825001 chr3R_19825001 RAL-301_75b 1778 chr3R 19953949 19953977 chr3R 19954026 19954054 5 77 2.5 3.5 3.0 1.2 105 chr3R 19953949 intron Hs6st - chr3R 19954002 intron Hs6st - chr3R 19954054 intron Hs6st - chr3R_5_19950001 chr3R_19950001 RAL-301_75b 1779 chr3R 19957276 19957293 chr3R 19957349 19957369 7 75 4.5 4.0 4.2 1.3 93 chr3R 19957276 intron Hs6st - chr3R 19957322 intron Hs6st - chr3R 19957369 intron Hs6st - chr3R_7_19955001 chr3R_19955001 RAL-301_75b 1780 chr3R 20002885 20002896 chr3R 20002991 20003002 6 104 3.5 2.5 3.0 1.5 117 chr3R 20002885 intron Hs6st - chr3R 20002944 intron Hs6st - chr3R 20003002 intron Hs6st - chr3R_6_20000001 chr3R_20000001 RAL-301_75b 1781 chr3R 20060634 20060657 chr3R 20060716 20060740 8 83 1.5 1.0 1.2 3.6 106 chr3R 20060634 intergenic not near genes chr3R 20060687 intergenic not near genes chr3R 20060740 intergenic not near genes chr3R_8_20060001 chr3R_20060001 RAL-301_75b 1782 chr3R 20109537 20109563 chr3R 20114743 20114769 copia 9 5206 1.0 2.5 1.8 3.2 5232 chr3R 20109537 intergenic not near genes chr3R 20112153 intergenic not near genes chr3R 20114769 intergenic CG10887 + chr3R_9_20110001 chr3R_20110001 RAL-301_75b 1783 chr3R 20156695 20156722 chr3R 20165863 20165892 roo 16 9169 3.0 6.5 4.8 2.8 9197 chr3R 20156695 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165892 intergenic not near genes chr3R_16_20160001 chr3R_20160001 RAL-301_75b 1784 chr3R 20195228 20195257 chr3R 20195314 20195340 12 85 2.0 1.0 1.5 4.8 112 chr3R 20195228 intergenic not near genes chr3R 20195284 intergenic not near genes chr3R 20195340 intergenic not near genes chr3R_12_20195001 chr3R_20195001 RAL-301_75b 1785 chr3R 20197118 20197148 chr3R 20197194 20197224 11 77 2.0 1.5 1.8 3.9 106 chr3R 20197118 intergenic not near genes chr3R 20197171 intergenic not near genes chr3R 20197224 intergenic not near genes chr3R_11_20195001 chr3R_20195001 RAL-301_75b 1786 chr3R 20205565 20205594 chr3R 20205687 20205715 8 122 2.0 1.5 1.8 2.9 150 chr3R 20205565 intron Nlg4 + chr3R 20205640 intron Nlg4 + chr3R 20205715 intron Nlg4 + chr3R_8_20205001 chr3R_20205001 RAL-301_75b 1787 chr3R 20245279 20245305 chr3R 20248889 20248915 F-element 4 3610 4.5 2.0 3.2 1.0 3636 chr3R 20245279 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248915 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-301_75b 1788 chr3R 20266515 20266542 chr3R 20272986 20273013 Burdock 9 6471 1.0 4.0 2.5 2.6 6498 chr3R 20266515 intron cic + chr3R 20269764 intron cic + chr3R 20273013 intron cic + chr3R_9_20265001 chr3R_20265001 RAL-301_75b 1789 chr3R 20282278 20282307 chr3R 20282354 20282383 6 76 0.0 4.5 2.2 1.9 105 chr3R 20282278 intron cic + chr3R 20282330 intron cic + chr3R 20282383 intron cic + chr3R_6_20280001 chr3R_20280001 RAL-301_75b 1790 chr3R 20331011 20331027 chr3R 20331497 20331513 roo 7 486 2.0 2.5 2.2 2.2 502 chr3R 20331011 intergenic Sirt2 + chr3R 20331262 intergenic Sirt2 + chr3R 20331513 intergenic not near genes chr3R_7_20330001 chr3R_20330001 RAL-301_75b 1791 chr3R 20418090 20418119 chr3R 20418193 20418229 11 109 1.5 0.5 1.0 5.5 139 chr3R 20418090 intron Gfrl - chr3R 20418160 intron Gfrl - chr3R 20418229 intron Gfrl - chr3R_11_20415001 chr3R_20415001 RAL-301_75b 1792 chr3R 20475217 20475252 chr3R 20475305 20475340 7 88 3.5 5.5 4.5 1.3 123 chr3R 20475217 intron Gfrl - chr3R 20475278 intron Gfrl - chr3R 20475340 intron Gfrl - chr3R_7_20475001 chr3R_20475001 RAL-301_75b 1793 chr3R 20482425 20482454 chr3R 20482514 20482543 9 89 0.5 5.5 3.0 2.2 118 chr3R 20482425 intron Gfrl - chr3R 20482484 intron Gfrl - chr3R 20482543 intron Gfrl - chr3R_9_20480001 chr3R_20480001 RAL-301_75b 1794 chr3R 20498483 20498511 chr3R 20498563 20498593 11 82 1.0 3.5 2.2 3.4 110 chr3R 20498483 intergenic not near genes chr3R 20498538 intergenic not near genes chr3R 20498593 intergenic not near genes chr3R_11_20495001 chr3R_20495001 RAL-301_75b 1795 chr3R 20506589 20506616 chr3R 20507392 20507419 BS 9 803 2.0 5.5 3.8 1.9 830 chr3R 20506589 intergenic Or92a + chr3R 20507004 intergenic CG4288 - chr3R 20507419 3` UTR CG4288 - chr3R_9_20505001 chr3R_20505001 RAL-301_75b 1796 chr3R 20513005 20513030 chr3R 20515708 20515733 opus 5 2703 0.0 1.0 0.5 3.3 2728 chr3R 20513005 intergenic not near genes chr3R 20514369 intergenic not near genes chr3R 20515733 intergenic not near genes chr3R_5_20510001 chr3R_20510001 RAL-301_75b 1797 chr3R 20594480 20594511 chr3R 20594570 20594600 4 90 1.5 0.5 1.0 2.0 120 chr3R 20594480 intron bon + chr3R 20594540 intron bon + chr3R 20594600 intron bon + chr3R_4_20590001 chr3R_20590001 RAL-301_75b 1798 chr3R 20596191 20596212 chr3R 20596278 20596299 7 87 3.5 3.0 3.2 1.7 108 chr3R 20596191 intron bon + chr3R 20596245 intron bon + chr3R 20596299 intron bon + chr3R_7_20595001 chr3R_20595001 RAL-301_75b 1799 chr3R 20684212 20684246 chr3R 20684296 20684330 14 84 3.5 2.5 3.0 3.5 118 chr3R 20684212 intergenic not near genes chr3R 20684271 intergenic not near genes chr3R 20684330 intergenic not near genes chr3R_14_20680001 chr3R_20680001 RAL-301_75b 1800 chr3R 20707744 20707770 chr3R 20707959 20707985 11 215 4.5 5.0 4.8 1.9 241 chr3R 20707744 intron Oamb - chr3R 20707864 intron Oamb - chr3R 20707985 intron Oamb - chr3R_11_20705001 chr3R_20705001 RAL-301_75b 1801 chr3R 20722854 20722883 chr3R 20722980 20723008 9 126 2.0 2.0 2.0 3.0 154 chr3R 20722854 intergenic not near genes chr3R 20722931 intergenic not near genes chr3R 20723008 intergenic not near genes chr3R_9_20720001 chr3R_20720001 RAL-301_75b 1802 chr3R 20730928 20731061 chr3R 20731028 20731149 9 95 0.0 0.0 0.0 9.0 221 chr3R 20730928 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731149 intergenic CG31205 + chr3R_9_20730001 chr3R_20730001 RAL-301_75b 1803 chr3R 20771715 20771721 chr3R 20771796 20771802 4 80 0.0 3.0 1.5 1.6 87 chr3R 20771715 intron,intron Syp +,Takl1 - chr3R 20771758 intron,intron Syp +,Takl1 - chr3R 20771802 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 RAL-301_75b 1804 chr3R 20787438 20787449 chr3R 20787529 20787540 7 91 4.0 6.0 5.0 1.2 102 chr3R 20787438 intron Syp + chr3R 20787489 intron Syp + chr3R 20787540 intron Syp + chr3R_7_20785001 chr3R_20785001 RAL-301_75b 1805 chr3R 20854499 20854518 chr3R 20859289 20859308 Doc 8 4790 0.0 9.0 4.5 1.5 4809 chr3R 20854499 intron Ir93a - chr3R 20856904 intron Ir93a - chr3R 20859308 exon Ir93a - chr3R_8_20855001 chr3R_20855001 RAL-301_75b 1806 chr3R 20916328 20916350 chr3R 20916465 20916489 6 139 4.0 2.0 3.0 1.5 161 chr3R 20916328 intron,intron CG31191 -,hdly + chr3R 20916408 intron,intron CG31191 -,hdly + chr3R 20916489 intron,intron CG31191 -,hdly + chr3R_6_20915001 chr3R_20915001 RAL-301_75b 1807 chr3R 21141676 21141703 chr3R 21150157 21150184 Tirant 16 8481 2.5 10.0 6.2 2.2 8508 chr3R 21141676 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150184 intron SNF4Agamma + chr3R_16_21145001 chr3R_21145001 RAL-301_75b 1808 chr3R 21245854 21245865 chr3R 21245938 21245949 7 84 4.5 6.0 5.2 1.1 95 chr3R 21245854 intergenic CG5892 + chr3R 21245902 intergenic CG5892 + chr3R 21245949 intergenic not near genes chr3R_7_21245001 chr3R_21245001 RAL-301_75b 1809 chr3R 21463714 21463744 chr3R 21463861 21463891 12 147 0.5 1.5 1.0 6.0 177 chr3R 21463714 intergenic not near genes chr3R 21463802 intergenic not near genes chr3R 21463891 intergenic not near genes chr3R_12_21460001 chr3R_21460001 RAL-301_75b 1810 chr3R 21472015 21472036 chr3R 21472096 21472116 10 81 1.5 4.0 2.8 2.6 101 chr3R 21472015 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472116 intergenic not near genes chr3R_10_21470001 chr3R_21470001 RAL-301_75b 1811 chr3R 21624104 21624116 chr3R 21624196 21624210 5 94 1.0 0.5 0.8 2.8 106 chr3R 21624104 intron E2f - chr3R 21624157 intron E2f - chr3R 21624210 intron E2f - chr3R_5_21620001 chr3R_21620001 RAL-301_75b 1812 chr3R 21651244 21651260 chr3R 21651321 21651338 5 78 2.0 1.0 1.5 2.0 94 chr3R 21651244 intron E2f - chr3R 21651291 intron E2f - chr3R 21651338 intron E2f - chr3R_5_21650001 chr3R_21650001 RAL-301_75b 1813 chr3R 21761130 21761155 chr3R 21768522 21768547 mdg1 12 7392 3.5 1.5 2.5 3.4 7417 chr3R 21761130 exon CG42335 + chr3R 21764838 intron CG42335 + chr3R 21768547 exon CG42335 + chr3R_12_21760001 chr3R_21760001 RAL-301_75b 1814 chr3R 21784857 21784884 chr3R 21784955 21784982 16 98 3.0 0.5 1.8 5.7 125 chr3R 21784857 3` UTR,3` UTR CASK -,CRG - chr3R 21784920 3` UTR,3` UTR CASK -,CRG - chr3R 21784982 3` UTR,3` UTR CASK -,CRG - chr3R_16_21780001 chr3R_21780001 RAL-301_75b 1815 chr3R 21800493 21800513 chr3R 21800578 21800598 11 85 3.0 2.5 2.8 2.9 105 chr3R 21800493 intron CASK - chr3R 21800546 intron CASK - chr3R 21800598 intron CASK - chr3R_11_21800001 chr3R_21800001 RAL-301_75b 1816 chr3R 21836535 21836569 chr3R 21836627 21836661 7 92 3.0 0.5 1.8 2.5 126 chr3R 21836535 intergenic not near genes chr3R 21836598 intergenic not near genes chr3R 21836661 intergenic not near genes chr3R_7_21835001 chr3R_21835001 RAL-301_75b 1817 chr3R 21883974 21884004 chr3R 21884050 21884081 11 76 1.5 3.5 2.5 3.1 107 chr3R 21883974 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884028 intron,3` UTR CR45046 -,fit - chr3R 21884081 3` UTR,exon CR45046 -,fit - chr3R_11_21880001 chr3R_21880001 RAL-301_75b 1818 chr3R 21907534 21907534 chr3R 28831801 28831804 5 6924268 13.5 9.5 11.5 0.4 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_5_25365001 chr3R_25365001 RAL-301_75b 1819 chr3R 21907535 21907535 chr3R 28831801 28831803 20 6924266 14.0 9.5 11.8 1.6 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_20_25365001 chr3R_25365001 RAL-301_75b 1820 chr3R 21907536 21907536 chr3R 28831801 28831802 24 6924266 14.5 9.5 12.0 1.8 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_24_25365001 chr3R_25365001 RAL-301_75b 1821 chr3R 22117417 22117446 chr3R 22117493 22117522 17 76 5.0 3.5 4.2 3.3 105 chr3R 22117417 intergenic Ir94b -,Ir94c - chr3R 22117470 intergenic Ir94c -,Ir94b - chr3R 22117522 intergenic Ir94c -,Ir94b - chr3R_17_22115001 chr3R_22115001 RAL-301_75b 1822 chr3R 22117573 22117589 chr3R 22119091 22119107 7 1518 3.5 1.5 2.5 2.0 1534 chr3R 22117573 intergenic Ir94c -,Ir94b - chr3R 22118340 exon Ir94c - chr3R 22119107 exon Ir94c - chr3R_7_22115001 chr3R_22115001 RAL-301_75b 1823 chr3R 22234691 22234709 chr3R 22236010 22236028 pogo 13 1319 1.5 3.0 2.2 4.1 1337 chr3R 22234691 intron SKIP + chr3R 22235360 intron SKIP + chr3R 22236028 intron SKIP + chr3R_13_22235001 chr3R_22235001 RAL-301_75b 1824 chr3R 22239489 22239503 chr3R 22248549 22248563 roo 11 9059 5.0 0.0 2.5 3.1 9074 chr3R 22239489 intron SKIP + chr3R 22244026 intron SKIP + chr3R 22248563 intron SKIP + chr3R_11_22240001 chr3R_22240001 RAL-301_75b 1825 chr3R 22322586 22322620 chr3R 22322685 22322719 15 99 3.5 1.0 2.2 4.7 133 chr3R 22322586 intron CG34377 - chr3R 22322652 intron CG34377 - chr3R 22322719 intron CG34377 - chr3R_15_22320001 chr3R_22320001 RAL-301_75b 1826 chr3R 22450541 22450578 chr3R 22453181 22453218 NOF 6 2640 2.5 4.0 3.2 1.4 2677 chr3R 22450541 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453218 intron CG34376 + chr3R_6_22450001 chr3R_22450001 RAL-301_75b 1827 chr3R 22507601 22507618 chr3R 22507684 22507701 9 82 1.0 10.5 5.8 1.3 100 chr3R 22507601 intron Octbeta1R + chr3R 22507651 intron Octbeta1R + chr3R 22507701 intron Octbeta1R + chr3R_9_22505001 chr3R_22505001 RAL-301_75b 1828 chr3R 22510585 22510597 chr3R 22510653 22510672 5 75 0.0 3.0 1.5 2.0 87 chr3R 22510585 intron Octbeta1R + chr3R 22510628 intron Octbeta1R + chr3R 22510672 intron Octbeta1R + chr3R_5_22510001 chr3R_22510001 RAL-301_75b 1829 chr3R 22538443 22538462 chr3R 22538527 22538547 9 85 2.0 2.0 2.0 3.0 104 chr3R 22538443 intron CG5326 - chr3R 22538495 intron CG5326 - chr3R 22538547 intron CG5326 - chr3R_9_22535001 chr3R_22535001 RAL-301_75b 1830 chr3R 22640377 22640390 chr3R 22640459 22640472 7 82 0.0 0.0 0.0 7.0 95 chr3R 22640377 intron wake + chr3R 22640424 intron wake + chr3R 22640472 intron wake + chr3R_7_22640001 chr3R_22640001 RAL-301_75b 1831 chr3R 22648336 22648344 chr3R 22648413 22648423 12 79 8.5 1.5 5.0 2.0 87 chr3R 22648336 intron wake + chr3R 22648380 intron wake + chr3R 22648423 intron wake + chr3R_12_22645001 chr3R_22645001 RAL-301_75b 1832 chr3R 22657684 22657692 chr3R 22657761 22657770 5 77 0.0 6.0 3.0 1.2 86 chr3R 22657684 intron wake + chr3R 22657727 intron wake + chr3R 22657770 intron wake + chr3R_5_22655001 chr3R_22655001 RAL-301_75b 1833 chr3R 22711242 22711245 chr3R 22711318 22711321 4 76 1.5 8.0 4.8 0.7 79 chr3R 22711242 3` UTR wge - chr3R 22711282 3` UTR wge - chr3R 22711321 3` UTR wge - chr3R_4_22710001 chr3R_22710001 RAL-301_75b 1834 chr3R 22730904 22730932 chr3R 22730982 22731010 12 78 4.0 3.0 3.5 2.7 106 chr3R 22730904 3` UTR CG45049 + chr3R 22730957 3` UTR CG45049 + chr3R 22731010 3` UTR CG45049 + chr3R_12_22730001 chr3R_22730001 RAL-301_75b 1835 chr3R 22769090 22769123 chr3R 22769167 22769198 14 76 4.0 3.5 3.8 2.9 108 chr3R 22769090 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769144 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769198 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_14_22765001 chr3R_22765001 RAL-301_75b 1836 chr3R 22797759 22797917 chr3R 22797845 22798012 13 92 0.0 0.0 0.0 13.0 253 chr3R 22797759 intergenic not near genes chr3R 22797886 intergenic not near genes chr3R 22798012 intergenic not near genes chr3R_13_22795001 chr3R_22795001 RAL-301_75b 1837 chr3R 22842419 22842419 chr3R 22842518 22842518 4 99 19.5 26.5 23.0 0.2 99 chr3R 22842419 intergenic not near genes chr3R 22842468 intergenic not near genes chr3R 22842518 intergenic not near genes chr3R_4_22840001 chr3R_22840001 RAL-301_75b 1838 chr3R 22846351 22846381 chr3R 22846829 22846859 9 478 3.0 3.5 3.2 2.1 508 chr3R 22846351 intergenic CG4704 - chr3R 22846605 intergenic CG4704 - chr3R 22846859 intergenic not near genes chr3R_9_22845001 chr3R_22845001 RAL-301_75b 1839 chr3R 22867440 22867461 chr3R 22867570 22867590 8 130 1.0 3.0 2.0 2.7 150 chr3R 22867440 intergenic not near genes chr3R 22867515 intergenic not near genes chr3R 22867590 intergenic not near genes chr3R_8_22865001 chr3R_22865001 RAL-301_75b 1840 chr3R 22881207 22881219 chr3R 22884910 22884925 Doc 4 3705 0.5 3.0 1.8 1.4 3718 chr3R 22881207 intergenic not near genes chr3R 22883066 intergenic not near genes chr3R 22884925 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-301_75b 1841 chr3R 22913209 22913242 chr3R 22913283 22913318 10 76 3.0 4.5 3.8 2.1 109 chr3R 22913209 intron klg + chr3R 22913264 intron klg + chr3R 22913318 intron klg + chr3R_10_22910001 chr3R_22910001 RAL-301_75b 1842 chr3R 23064874 23064902 chr3R 23064965 23064992 8 91 0.0 3.0 1.5 3.2 118 chr3R 23064874 intron CG17111 - chr3R 23064933 intron CG17111 - chr3R 23064992 intron CG17111 - chr3R_8_23060001 chr3R_23060001 RAL-301_75b 1843 chr3R 23070663 23070666 chr3R 23070743 23070746 7 80 3.0 0.0 1.5 2.8 83 chr3R 23070663 3` UTR CG13830 - chr3R 23070704 3` UTR CG13830 - chr3R 23070746 3` UTR CG13830 - chr3R_7_23070001 chr3R_23070001 RAL-301_75b 1844 chr3R 23073657 23073683 chr3R 23073746 23073772 13 88 4.5 1.0 2.8 3.4 115 chr3R 23073657 intron CG13830 - chr3R 23073714 intron CG13830 - chr3R 23073772 intron CG13830 - chr3R_13_23070001 chr3R_23070001 RAL-301_75b 1845 chr3R 23077075 23077104 chr3R 23077369 23077398 13 294 2.5 2.5 2.5 3.7 323 chr3R 23077075 intron CG13830 - chr3R 23077236 intron CG13830 - chr3R 23077398 intron CG13830 - chr3R_13_23075001 chr3R_23075001 RAL-301_75b 1846 chr3R 23082955 23082981 chr3R 23083154 23083180 14 199 0.5 1.5 1.0 7.0 225 chr3R 23082955 intron CG13830 - chr3R 23083068 intron CG13830 - chr3R 23083180 intron CG13830 - chr3R_14_23080001 chr3R_23080001 RAL-301_75b 1847 chr3R 23145159 23145175 chr3R 23145236 23145250 7 77 3.5 3.0 3.2 1.7 91 chr3R 23145159 intergenic not near genes chr3R 23145204 intergenic not near genes chr3R 23145250 intergenic not near genes chr3R_7_23145001 chr3R_23145001 RAL-301_75b 1848 chr3R 23239259 23239283 chr3R 23239354 23239377 14 95 5.0 2.0 3.5 3.1 118 chr3R 23239259 intron CG4467 - chr3R 23239318 intron CG4467 - chr3R 23239377 intron CG4467 - chr3R_14_23235001 chr3R_23235001 RAL-301_75b 1849 chr3R 23246004 23246021 chr3R 23246086 23246098 9 81 2.5 1.0 1.8 3.2 94 chr3R 23246004 intron CG4467 - chr3R 23246051 intron CG4467 - chr3R 23246098 intron CG4467 - chr3R_9_23245001 chr3R_23245001 RAL-301_75b 1850 chr3R 23291246 23291283 chr3R 23291332 23291369 15 86 4.5 1.5 3.0 3.8 123 chr3R 23291246 3` UTR pnt - chr3R 23291308 3` UTR pnt - chr3R 23291369 exon pnt - chr3R_15_23290001 chr3R_23290001 RAL-301_75b 1851 chr3R 23341944 23341950 chr3R 23342062 23342068 4 118 3.5 2.5 3.0 1.0 124 chr3R 23341944 intron pnt - chr3R 23342006 intron pnt - chr3R 23342068 intron pnt - chr3R_4_23340001 chr3R_23340001 RAL-301_75b 1852 chr3R 23389948 23389982 chr3R 23390027 23390060 11 79 1.0 1.5 1.2 5.0 112 chr3R 23389948 intergenic CR43387 + chr3R 23390004 intergenic CR43387 + chr3R 23390060 intergenic CR43387 + chr3R_11_23390001 chr3R_23390001 RAL-301_75b 1853 chr3R 23413108 23413143 chr3R 23413196 23413231 14 87 8.0 5.0 6.5 1.9 123 chr3R 23413108 intron CG4374 - chr3R 23413170 intron CG4374 - chr3R 23413231 intron CG4374 - chr3R_14_23410001 chr3R_23410001 RAL-301_75b 1854 chr3R 23540798 23540808 chr3R 23540888 23540899 8 90 3.5 9.5 6.5 1.1 101 chr3R 23540798 intergenic not near genes chr3R 23540848 intergenic not near genes chr3R 23540899 intergenic not near genes chr3R_8_23540001 chr3R_23540001 RAL-301_75b 1855 chr3R 23558416 23558428 chr3R 23560197 23560209 Bari1 9 1781 4.0 6.0 5.0 1.5 1793 chr3R 23558416 intron beat-IV + chr3R 23559312 intron beat-IV + chr3R 23560209 intron beat-IV + chr3R_9_23555001 chr3R_23555001 RAL-301_75b 1856 chr3R 23590020 23590053 chr3R 23590117 23590151 26 98 4.0 5.0 4.5 4.7 131 chr3R 23590020 intergenic CG33337 -,CG10182 - chr3R 23590086 intergenic CG33337 -,CG10182 - chr3R 23590151 exon CG33337 - chr3R_26_23590001 chr3R_23590001 RAL-301_75b 1857 chr3R 23612158 23612185 chr3R 23612278 23612308 5 122 2.5 2.5 2.5 1.4 150 chr3R 23612158 intron CG31145 - chr3R 23612233 intron CG31145 - chr3R 23612308 intron CG31145 - chr3R_5_23610001 chr3R_23610001 RAL-301_75b 1858 chr3R 23678541 23678573 chr3R 23678857 23678889 19 316 15.0 14.0 14.5 1.2 348 chr3R 23678541 intergenic CG13822 +,CG10157 + chr3R 23678715 intergenic CG10157 +,CG13822 + chr3R 23678889 intergenic CG10157 +,CG13822 + chr3R_19_23675001 chr3R_23675001 RAL-301_75b 1859 chr3R 23677812 23677839 chr3R 23684147 23684174 34 6336 37.0 46.0 41.5 0.8 6362 chr3R 23677812 intron CG13822 + chr3R 23680993 exon eIF-3p66 + chr3R 23684174 intron CG18754 + chr3R_34_23680001 chr3R_23680001 RAL-301_75b 1860 chr3R 23684712 23684719 chr3R 23685198 23685205 roo 4 485 1.5 5.0 3.2 1.0 493 chr3R 23684712 intron CG18754 + chr3R 23684958 intron CG18754 + chr3R 23685205 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-301_75b 1861 chr3R 23801578 23801601 chr3R 23801666 23801688 8 88 4.5 0.0 2.2 2.5 110 chr3R 23801578 3` UTR mbc + chr3R 23801633 3` UTR mbc + chr3R 23801688 intergenic CG33111 -,mbc + chr3R_8_23800001 chr3R_23800001 RAL-301_75b 1862 chr3R 23835404 23835434 chr3R 23844554 23844584 roo 11 9150 5.5 1.5 3.5 2.4 9180 chr3R 23835404 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844584 intron CG34355 + chr3R_11_23835001 chr3R_23835001 RAL-301_75b 1863 chr3R 23888083 23888109 chr3R 23888169 23888195 13 86 0.5 3.0 1.8 4.6 112 chr3R 23888083 intron Pli - chr3R 23888139 intron Pli - chr3R 23888195 intron Pli - chr3R_13_23885001 chr3R_23885001 RAL-301_75b 1864 chr3R 23937618 23937637 chr3R 23937716 23937735 4 98 0.5 2.0 1.2 1.8 117 chr3R 23937618 exon Gdh - chr3R 23937676 intron Gdh - chr3R 23937735 exon Gdh - chr3R_4_23935001 chr3R_23935001 RAL-301_75b 1865 chr3R 23941260 23941288 chr3R 23941336 23941364 11 76 2.5 3.5 3.0 2.8 104 chr3R 23941260 intron Gdh - chr3R 23941312 intron Gdh - chr3R 23941364 intron Gdh - chr3R_11_23940001 chr3R_23940001 RAL-301_75b 1866 chr3R 23944910 23944933 chr3R 23944995 23945018 15 85 7.0 0.0 3.5 3.3 108 chr3R 23944910 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945018 exon CG12268 - chr3R_15_23940001 chr3R_23940001 RAL-301_75b 1867 chr3R 24015424 24015451 chr3R 24015501 24015526 6 76 0.0 3.5 1.8 2.1 102 chr3R 24015424 intron KrT95D - chr3R 24015475 intron KrT95D - chr3R 24015526 intron KrT95D - chr3R_6_24015001 chr3R_24015001 RAL-301_75b 1868 chr3R 24076912 24076947 chr3R 24078379 24078414 hobo 16 1467 2.5 1.0 1.8 5.7 1502 chr3R 24076912 intron 4EHP - chr3R 24077663 intron 4EHP - chr3R 24078414 intron 4EHP - chr3R_16_24075001 chr3R_24075001 RAL-301_75b 1869 chr3R 24100460 24100481 chr3R 24100555 24100576 7 95 2.5 2.5 2.5 2.0 116 chr3R 24100460 intron 4EHP - chr3R 24100518 intron 4EHP - chr3R 24100576 intron 4EHP - chr3R_7_24100001 chr3R_24100001 RAL-301_75b 1870 chr3R 24199749 24199767 chr3R 24199829 24199847 6 80 3.5 5.5 4.5 1.1 98 chr3R 24199749 intron twin - chr3R 24199798 intron twin - chr3R 24199847 intron twin - chr3R_6_24195001 chr3R_24195001 RAL-301_75b 1871 chr3R 24207217 24207234 chr3R 24212293 24212310 flea 4 5076 4.0 5.0 4.5 0.7 5093 chr3R 24207217 intron twin - chr3R 24209764 intron twin - chr3R 24212310 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-301_75b 1872 chr3R 24384054 24384080 chr3R 24384136 24384159 16 82 4.0 4.0 4.0 3.2 105 chr3R 24384054 intron CG17780 - chr3R 24384106 intron CG17780 - chr3R 24384159 exon CG17780 - chr3R_16_24380001 chr3R_24380001 RAL-301_75b 1873 chr3R 21907535 21907535 chr3R 24389465 24389465 8 2481930 14.0 15.5 14.8 0.5 2481930 chr3R 21907535 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_8_23145001 chr3R_23145001 RAL-301_75b 1874 chr3R 24433477 24433478 chr3R 24433556 24433557 4 79 3.5 5.0 4.2 0.8 80 chr3R 24433477 intron nAChRalpha1 - chr3R 24433517 intron nAChRalpha1 - chr3R 24433557 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-301_75b 1875 chr3R 24433479 24433504 chr3R 24433555 24433583 7 78 1.5 5.0 3.2 1.7 104 chr3R 24433479 intron nAChRalpha1 - chr3R 24433531 intron nAChRalpha1 - chr3R 24433583 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-301_75b 1876 chr3R 24441626 24441647 chr3R 24441908 24441929 7 282 2.5 2.0 2.2 2.2 303 chr3R 24441626 intron nAChRalpha1 - chr3R 24441778 intron nAChRalpha1 - chr3R 24441929 intron nAChRalpha1 - chr3R_7_24440001 chr3R_24440001 RAL-301_75b 1877 chr3R 24493063 24493087 chr3R 24493149 24493173 9 86 4.0 0.5 2.2 2.8 110 chr3R 24493063 intergenic not near genes chr3R 24493118 intergenic not near genes chr3R 24493173 intergenic not near genes chr3R_9_24490001 chr3R_24490001 RAL-301_75b 1878 chr3R 24496476 24496503 chr3R 24496558 24496584 5 81 3.0 1.5 2.2 1.6 108 chr3R 24496476 intergenic not near genes chr3R 24496530 intergenic not near genes chr3R 24496584 intergenic not near genes chr3R_5_24495001 chr3R_24495001 RAL-301_75b 1879 chr3R 24624374 24624381 chr3R 24624463 24624470 7 89 0.0 2.5 1.2 3.2 96 chr3R 24624374 intron Syx18 - chr3R 24624422 intron Syx18 - chr3R 24624470 intron Syx18 - chr3R_7_24620001 chr3R_24620001 RAL-301_75b 1880 chr3R 24635653 24635672 chr3R 24635739 24635758 6 86 3.0 8.0 5.5 0.9 105 chr3R 24635653 3` UTR puf - chr3R 24635706 3` UTR puf - chr3R 24635758 3` UTR puf - chr3R_6_24635001 chr3R_24635001 RAL-301_75b 1881 chr3R 24667605 24667629 chr3R 24667682 24667706 6 77 1.0 0.0 0.5 4.0 101 chr3R 24667605 intron slo + chr3R 24667656 intron slo + chr3R 24667706 intron slo + chr3R_6_24665001 chr3R_24665001 RAL-301_75b 1882 chr3R 24670053 24670199 chr3R 24670163 24670284 12 99 0.0 0.0 0.0 12.0 231 chr3R 24670053 intron slo + chr3R 24670168 intron slo + chr3R 24670284 intron slo + chr3R_12_24670001 chr3R_24670001 RAL-301_75b 1883 chr3R 24730089 24730119 chr3R 24732467 24732497 Doc 12 2377 2.0 0.0 1.0 6.0 2408 chr3R 24730089 intron tok + chr3R 24731293 intron tok + chr3R 24732497 intron tok + chr3R_12_24730001 chr3R_24730001 RAL-301_75b 1884 chr3R 24772336 24772356 chr3R 24772424 24772444 9 88 2.0 1.5 1.8 3.2 108 chr3R 24772336 intron CG42331 + chr3R 24772390 intron CG42331 + chr3R 24772444 intron CG42331 + chr3R_9_24770001 chr3R_24770001 RAL-301_75b 1885 chr3R 24834635 24834664 chr3R 24834715 24834744 11 80 2.0 2.5 2.2 3.4 109 chr3R 24834635 intron sosie + chr3R 24834690 intron sosie + chr3R 24834744 intron sosie + chr3R_11_24830001 chr3R_24830001 RAL-301_75b 1886 chr3R 24927127 24927154 chr3R 24931918 24931945 Doc 12 4791 4.5 3.5 4.0 2.4 4818 chr3R 24927127 intergenic Trf4-2 + chr3R 24929536 intergenic not near genes chr3R 24931945 intergenic CG11771 + chr3R_12_24925001 chr3R_24925001 RAL-301_75b 1887 chr3R 24974919 24974933 chr3R 24974998 24975011 9 79 2.0 7.0 4.5 1.6 92 chr3R 24974919 intergenic not near genes chr3R 24974965 intergenic not near genes chr3R 24975011 intergenic not near genes chr3R_9_24970001 chr3R_24970001 RAL-301_75b 1888 chr3R 25004907 25004922 chr3R 25004990 25005005 12 82 0.0 5.0 2.5 3.4 98 chr3R 25004907 intron tnc + chr3R 25004956 intron tnc + chr3R 25005005 intron tnc + chr3R_12_25000001 chr3R_25000001 RAL-301_75b 1889 chr3R 25027538 25027566 chr3R 25027751 25027778 13 213 5.5 1.0 3.2 3.1 240 chr3R 25027538 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027778 intron Hr96 + chr3R_13_25025001 chr3R_25025001 RAL-301_75b 1890 chr3R 25053153 25053165 chr3R 25053237 25053250 12 85 1.0 5.5 3.2 2.9 97 chr3R 25053153 intergenic CG11791 +,CG31109 - chr3R 25053202 intergenic CG11791 +,CG31109 - chr3R 25053250 intergenic CG31109 -,CG11791 + chr3R_12_25050001 chr3R_25050001 RAL-301_75b 1891 chr3R 25166361 25166390 chr3R 25166437 25166466 8 76 1.0 2.0 1.5 3.2 105 chr3R 25166361 intergenic not near genes chr3R 25166414 intergenic not near genes chr3R 25166466 intergenic not near genes chr3R_8_25165001 chr3R_25165001 RAL-301_75b 1892 chr3R 25296169 25296191 chr3R 25296248 25296271 11 80 3.0 4.0 3.5 2.4 102 chr3R 25296169 3` UTR CG31097 - chr3R 25296220 3` UTR CG31097 - chr3R 25296271 3` UTR CG31097 - chr3R_11_25295001 chr3R_25295001 RAL-301_75b 1893 chr3R 25368476 25368497 chr3R 25368594 25368614 12 117 6.5 0.0 3.2 2.9 138 chr3R 25368476 intron Fur1 - chr3R 25368545 intron Fur1 - chr3R 25368614 intron Fur1 - chr3R_12_25365001 chr3R_25365001 RAL-301_75b 1894 chr3R 25464496 25464518 chr3R 25464811 25464835 8 317 3.0 3.0 3.0 2.0 339 chr3R 25464496 intron Fur1 - chr3R 25464666 intron Fur1 - chr3R 25464835 intron Fur1 - chr3R_8_25460001 chr3R_25460001 RAL-301_75b 1895 chr3R 25689126 25689162 chr3R 25689234 25689269 9 108 7.0 5.5 6.2 1.2 143 chr3R 25689126 intergenic not near genes chr3R 25689198 intergenic not near genes chr3R 25689269 intergenic not near genes chr3R_9_25685001 chr3R_25685001 RAL-301_75b 1896 chr3R 25725827 25725845 chr3R 25734987 25735005 roo 12 9160 3.0 0.5 1.8 4.3 9178 chr3R 25725827 intron LpR2 - chr3R 25730416 intron LpR2 - chr3R 25735005 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-301_75b 1897 chr3R 25832691 25832715 chr3R 25841873 25841894 roo 6 9181 4.0 4.0 4.0 1.2 9203 chr3R 25832691 exon alpha4GT2 + chr3R 25837292 intron alpha4GT2 + chr3R 25841894 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-301_75b 1898 chr3R 25863944 25863973 chr3R 25864032 25864061 5 88 1.0 5.0 3.0 1.2 117 chr3R 25863944 intron CG5890 + chr3R 25864002 intron CG5890 + chr3R 25864061 intron CG5890 + chr3R_5_25860001 chr3R_25860001 RAL-301_75b 1899 chr3R 25871096 25871127 chr3R 25871231 25871262 11 135 2.0 3.0 2.5 3.1 166 chr3R 25871096 3` UTR CG5890 + chr3R 25871179 3` UTR CG5890 + chr3R 25871262 3` UTR CG5890 + chr3R_11_25870001 chr3R_25870001 RAL-301_75b 1900 chr3R 25927509 25927539 chr3R 25927591 25927620 9 82 1.5 0.5 1.0 4.5 111 chr3R 25927509 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927620 intron CCAP-R - chr3R_9_25925001 chr3R_25925001 RAL-301_75b 1901 chr3R 25958822 25958848 chr3R 25958910 25958936 8 88 7.0 4.0 5.5 1.2 114 chr3R 25958822 intergenic CG14540 + chr3R 25958879 intergenic CG14540 + chr3R 25958936 intergenic CG14540 + chr3R_8_25955001 chr3R_25955001 RAL-301_75b 1902 chr3R 26010179 26010209 chr3R 26010255 26010286 7 77 1.5 8.0 4.8 1.2 107 chr3R 26010179 intergenic not near genes chr3R 26010232 intergenic not near genes chr3R 26010286 intergenic not near genes chr3R_7_26010001 chr3R_26010001 RAL-301_75b 1903 chr3R 26093847 26093875 chr3R 26093925 26093953 9 78 2.5 4.5 3.5 2.0 106 chr3R 26093847 intron dys - chr3R 26093900 intron dys - chr3R 26093953 intron dys - chr3R_9_26090001 chr3R_26090001 RAL-301_75b 1904 chr3R 26229221 26229256 chr3R 26229305 26229342 6 84 3.5 0.5 2.0 2.0 121 chr3R 26229221 intergenic not near genes chr3R 26229282 intergenic not near genes chr3R 26229342 intergenic not near genes chr3R_6_26225001 chr3R_26225001 RAL-301_75b 1905 chr3R 26272860 26272885 chr3R 26272955 26272980 16 95 4.0 4.5 4.2 3.1 120 chr3R 26272860 intron CG6154 + chr3R 26272920 intron CG6154 + chr3R 26272980 intron CG6154 + chr3R_16_26270001 chr3R_26270001 RAL-301_75b 1906 chr3R 26292104 26292134 chr3R 26292184 26292214 9 80 2.5 5.5 4.0 1.8 110 chr3R 26292104 intergenic not near genes chr3R 26292159 intergenic not near genes chr3R 26292214 intergenic not near genes chr3R_9_26290001 chr3R_26290001 RAL-301_75b 1907 chr3R 26294717 26294749 chr3R 26294795 26294827 16 78 0.5 4.5 2.5 4.6 110 chr3R 26294717 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294827 intergenic not near genes chr3R_16_26290001 chr3R_26290001 RAL-301_75b 1908 chr3R 26376322 26376350 chr3R 26385482 26385510 roo 9 9160 1.0 0.0 0.5 6.0 9188 chr3R 26376322 intergenic not near genes chr3R 26380916 intergenic not near genes chr3R 26385510 intergenic not near genes chr3R_9_26380001 chr3R_26380001 RAL-301_75b 1909 chr3R 23469063 23469064 chr3R 26400207 26400208 5 2931143 25.5 7.0 16.2 0.3 2931145 chr3R 23469063 intron CG4374 - chr3R 24934636 3` UTR CG11771 + chr3R 26400208 intergenic not near genes chr3R_5_24930001 chr3R_24930001 RAL-301_75b 1910 chr3R 26510521 26510528 chr3R 26519576 26519581 roo 5 9054 5.0 3.0 4.0 1.0 9060 chr3R 26510521 intron plum - chr3R 26515051 intron plum - chr3R 26519581 intron,5` UTR plum -,CR45226 + chr3R_5_26515001 chr3R_26515001 RAL-301_75b 1911 chr3R 26542057 26542073 chr3R 26542148 26542164 5 91 4.0 2.5 3.2 1.2 107 chr3R 26542057 intron scrib + chr3R 26542110 intron scrib + chr3R 26542164 intron scrib + chr3R_5_26540001 chr3R_26540001 RAL-301_75b 1912 chr3R 26558328 26558356 chr3R 26565638 26565667 Stalker4 8 7311 4.5 3.5 4.0 1.6 7339 chr3R 26558328 intron scrib + chr3R 26561998 intron scrib + chr3R 26565667 intron scrib + chr3R_8_26560001 chr3R_26560001 RAL-301_75b 1913 chr3R 26611357 26611362 chr3R 26611433 26611438 6 76 3.0 2.5 2.8 1.6 81 chr3R 26611357 intergenic not near genes chr3R 26611398 intergenic not near genes chr3R 26611438 intergenic not near genes chr3R_6_26610001 chr3R_26610001 RAL-301_75b 1914 chr3R 26642747 26642754 chr3R 26643141 26643148 jockey 5 394 6.5 11.5 9.0 0.5 401 chr3R 26642747 intergenic not near genes chr3R 26642948 intergenic not near genes chr3R 26643148 intergenic not near genes chr3R_5_26640001 chr3R_26640001 RAL-301_75b 1915 chr3R 26651530 26651547 chr3R 26651615 26651632 5 85 6.0 4.5 5.2 0.8 102 chr3R 26651530 intron beat-VII - chr3R 26651581 intron beat-VII - chr3R 26651632 intron beat-VII - chr3R_5_26650001 chr3R_26650001 RAL-301_75b 1916 chr3R 26770245 26770272 chr3R 26770322 26770349 16 76 2.0 2.5 2.2 5.0 104 chr3R 26770245 intergenic CR45563 + chr3R 26770297 intergenic CR45563 + chr3R 26770349 intergenic not near genes chr3R_16_26770001 chr3R_26770001 RAL-301_75b 1917 chr3R 26810562 26810583 chr3R 26811046 26811068 roo 4 485 2.0 8.5 5.2 0.6 506 chr3R 26810562 intron Tl + chr3R 26810815 intron Tl + chr3R 26811068 intron Tl + chr3R_4_26810001 chr3R_26810001 RAL-301_75b 1918 chr3R 26845575 26845606 chr3R 26845655 26845686 8 80 2.0 5.5 3.8 1.7 111 chr3R 26845575 intron Lerp - chr3R 26845630 intron Lerp - chr3R 26845686 intron Lerp - chr3R_8_26845001 chr3R_26845001 RAL-301_75b 1919 chr3R 26908056 26908063 chr3R 26908153 26908160 7 97 1.5 4.5 3.0 1.8 104 chr3R 26908056 intron T48 + chr3R 26908108 intron T48 + chr3R 26908160 intron T48 + chr3R_7_26905001 chr3R_26905001 RAL-301_75b 1920 chr3R 26960732 26960767 chr3R 26960821 26960854 7 88 1.5 1.5 1.5 2.8 122 chr3R 26960732 intergenic Tsp97E - chr3R 26960793 intergenic Tsp97E - chr3R 26960854 intergenic Tsp97E - chr3R_7_26960001 chr3R_26960001 RAL-301_75b 1921 chr3R 27027691 27027720 chr3R 27027772 27027801 7 82 1.5 4.5 3.0 1.8 110 chr3R 27027691 intron RYa-R + chr3R 27027746 intron RYa-R + chr3R 27027801 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-301_75b 1922 chr3R 27028731 27028749 chr3R 27028810 27028828 6 78 2.0 1.5 1.8 2.1 97 chr3R 27028731 intron RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028828 intron RYa-R + chr3R_6_27025001 chr3R_27025001 RAL-301_75b 1923 chr3R 27073664 27073681 chr3R 27073747 27073764 5 83 2.0 1.5 1.8 1.8 100 chr3R 27073664 intergenic not near genes chr3R 27073714 intergenic not near genes chr3R 27073764 intergenic not near genes chr3R_5_27070001 chr3R_27070001 RAL-301_75b 1924 chr3R 27140521 27140547 chr3R 27148130 27148153 412 12 7609 8.0 1.0 4.5 2.2 7632 chr3R 27140521 intron CG6051 - chr3R 27144337 intron CG6051 - chr3R 27148153 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-301_75b 1925 chr3R 27221248 27221251 chr3R 27221338 27221341 4 89 3.5 3.0 3.2 1.0 93 chr3R 27221248 intergenic not near genes chr3R 27221294 intergenic not near genes chr3R 27221341 intergenic not near genes chr3R_4_27220001 chr3R_27220001 RAL-301_75b 1926 chr3R 27248131 27248153 chr3R 27248212 27248233 7 81 2.5 2.0 2.2 2.2 102 chr3R 27248131 intergenic CG5987 -,CG5984 - chr3R 27248182 intergenic CG5987 -,CG5984 - chr3R 27248233 3` UTR CG5987 - chr3R_7_27245001 chr3R_27245001 RAL-301_75b 1927 chr3R 27315995 27316011 chr3R 27316071 27316087 10 76 5.5 3.0 4.2 1.9 92 chr3R 27315995 intron CG3339 - chr3R 27316041 intron CG3339 - chr3R 27316087 exon CG3339 - chr3R_10_27315001 chr3R_27315001 RAL-301_75b 1928 chr3R 27329478 27329494 chr3R 27329555 27329571 6 77 4.5 2.5 3.5 1.3 93 chr3R 27329478 intergenic CG3330 - chr3R 27329524 intergenic CG3330 - chr3R 27329571 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 RAL-301_75b 1929 chr3R 27335949 27335965 chr3R 27336030 27336045 8 80 0.0 0.0 0.0 8.0 96 chr3R 27335949 intergenic not near genes chr3R 27335997 intergenic not near genes chr3R 27336045 intergenic not near genes chr3R_8_27335001 chr3R_27335001 RAL-301_75b 1930 chr3R 27342205 27342234 chr3R 27342322 27342354 11 121 5.5 2.5 4.0 2.2 149 chr3R 27342205 intron CG42534 + chr3R 27342280 intron CG42534 + chr3R 27342354 intron CG42534 + chr3R_11_27340001 chr3R_27340001 RAL-301_75b 1931 chr3R 27342792 27342816 chr3R 27351373 27351397 Tirant 7 8581 2.5 1.0 1.8 2.5 8605 chr3R 27342792 intron CG42534 + chr3R 27347094 intron CG42534 + chr3R 27351397 intron CG42534 + chr3R_7_27345001 chr3R_27345001 RAL-301_75b 1932 chr3R 27356487 27356522 chr3R 27356568 27356603 5 81 1.5 4.0 2.8 1.3 116 chr3R 27356487 intron CG42534 + chr3R 27356545 intron CG42534 + chr3R 27356603 intron CG42534 + chr3R_5_27355001 chr3R_27355001 RAL-301_75b 1933 chr3R 27473768 27473795 chr3R 27474023 27474050 11 255 6.5 3.5 5.0 1.8 282 chr3R 27473768 intergenic not near genes chr3R 27473909 intergenic not near genes chr3R 27474050 intergenic not near genes chr3R_11_27470001 chr3R_27470001 RAL-301_75b 1934 chr3R 27479159 27479191 chr3R 27479270 27479302 12 111 2.5 3.5 3.0 3.0 143 chr3R 27479159 exon Cyp6a18 + chr3R 27479230 exon Cyp6a18 + chr3R 27479302 exon Cyp6a18 + chr3R_12_27475001 chr3R_27475001 RAL-301_75b 1935 chr3R 27521163 27521190 chr3R 27530372 27530399 roo 7 9209 2.5 4.5 3.5 1.6 9236 chr3R 27521163 intron CG12885 + chr3R 27525781 intron CG12885 + chr3R 27530399 intron CG12885 + chr3R_7_27525001 chr3R_27525001 RAL-301_75b 1936 chr3R 27538571 27538577 chr3R 27538920 27538928 4 350 5.0 0.0 2.5 1.1 357 chr3R 27538571 5` UTR CR44288 + chr3R 27538750 5` UTR CR44288 + chr3R 27538928 5` UTR CR44288 + chr3R_4_27535001 chr3R_27535001 RAL-301_75b 1937 chr3R 27627089 27627119 chr3R 27627191 27627219 8 102 2.0 3.0 2.5 2.3 130 chr3R 27627089 intron Tusp + chr3R 27627154 intron Tusp + chr3R 27627219 intron Tusp + chr3R_8_27625001 chr3R_27625001 RAL-301_75b 1938 chr3R 27648591 27648870 chr3R 27648674 27648947 12 80 0.5 0.0 0.2 10.0 356 chr3R 27648591 intron tau - chr3R 27648769 intron tau - chr3R 27648947 intron tau - chr3R_12_27645001 chr3R_27645001 RAL-301_75b 1939 chr3R 27706779 27706793 chr3R 27706856 27706870 5 77 2.5 1.0 1.8 1.8 91 chr3R 27706779 intergenic CG12428 -,CG12877 + chr3R 27706824 intergenic CG12428 -,CG12877 + chr3R 27706870 intergenic CG12428 -,CG12877 + chr3R_5_27705001 chr3R_27705001 RAL-301_75b 1940 chr3R 27718580 27718598 chr3R 27718659 27718677 8 78 2.0 1.5 1.8 2.9 97 chr3R 27718580 intergenic not near genes chr3R 27718628 intergenic not near genes chr3R 27718677 intergenic not near genes chr3R_8_27715001 chr3R_27715001 RAL-301_75b 1941 chr3R 27725571 27725588 chr3R 27731013 27731030 I-element 8 5442 10.5 3.5 7.0 1.0 5459 chr3R 27725571 intergenic not near genes chr3R 27728300 intergenic not near genes chr3R 27731030 intergenic not near genes chr3R_8_27725001 chr3R_27725001 RAL-301_75b 1942 chr3R 27779271 27779287 chr3R 27779351 27779367 12 80 1.0 5.5 3.2 2.9 96 chr3R 27779271 exon CG34353 - chr3R 27779319 intron CG34353 - chr3R 27779367 intron CG34353 - chr3R_12_27775001 chr3R_27775001 RAL-301_75b 1943 chr3R 27799937 27799963 chr3R 27800019 27800045 5 82 4.0 3.5 3.8 1.0 108 chr3R 27799937 intron CG34353 - chr3R 27799991 intron CG34353 - chr3R 27800045 intron CG34353 - chr3R_5_27795001 chr3R_27795001 RAL-301_75b 1944 chr3R 27800530 27800553 chr3R 27803081 27803104 11 2552 21.0 21.5 21.2 0.5 2574 chr3R 27800530 intron CG34353 - chr3R 27801817 intron CG34353 - chr3R 27803104 intron CG34353 - chr3R_11_27800001 chr3R_27800001 RAL-301_75b 1945 chr3R 27812453 27812461 chr3R 27812530 27812538 6 76 2.5 10.5 6.5 0.8 85 chr3R 27812453 intron CG34353 - chr3R 27812496 intron CG34353 - chr3R 27812538 intron CG34353 - chr3R_6_27810001 chr3R_27810001 RAL-301_75b 1946 chr3R 27856757 27856786 chr3R 27858240 27858269 hopper2 11 1482 4.5 5.0 4.8 1.9 1512 chr3R 27856757 intron CG34353 - chr3R 27857513 intron CG34353 - chr3R 27858269 intron CG34353 - chr3R_11_27855001 chr3R_27855001 RAL-301_75b 1947 chr3R 27862953 27862987 chr3R 27868258 27868292 Transpac 16 5305 2.0 0.0 1.0 8.0 5339 chr3R 27862953 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868292 intron CG34353 - chr3R_16_27865001 chr3R_27865001 RAL-301_75b 1948 chr3R 27875701 27875729 chr3R 27882756 27882784 297 21 7055 3.0 5.5 4.2 4.0 7083 chr3R 27875701 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882784 intron CG34353 - chr3R_21_27875001 chr3R_27875001 RAL-301_75b 1949 chr3R 28017963 28017978 chr3R 28018051 28018069 5 90 1.0 2.0 1.5 2.0 106 chr3R 28017963 intergenic not near genes chr3R 28018016 intergenic not near genes chr3R 28018069 intergenic not near genes chr3R_5_28015001 chr3R_28015001 RAL-301_75b 1950 chr3R 28068495 28068522 chr3R 28073937 28073961 I-element 8 5442 1.5 3.0 2.2 2.5 5466 chr3R 28068495 intron CG34362 + chr3R 28071228 intron CG34362 + chr3R 28073961 intron CG34362 + chr3R_8_28070001 chr3R_28070001 RAL-301_75b 1951 chr3R 28091821 28091831 chr3R 28091909 28091919 5 88 0.5 3.0 1.8 1.8 98 chr3R 28091821 intergenic not near genes chr3R 28091870 intergenic not near genes chr3R 28091919 intergenic not near genes chr3R_5_28090001 chr3R_28090001 RAL-301_75b 1952 chr3R 28173673 28173692 chr3R 28181103 28181122 mdg1 5 7430 5.0 4.0 4.5 0.9 7449 chr3R 28173673 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181122 intron CG34354 + chr3R_5_28175001 chr3R_28175001 RAL-301_75b 1953 chr3R 28201504 28201526 chr3R 28202144 28202166 4 640 4.0 0.5 2.2 1.2 662 chr3R 28201504 intron CG34354 + chr3R 28201835 intron CG34354 + chr3R 28202166 intron CG34354 + chr3R_4_28200001 chr3R_28200001 RAL-301_75b 1954 chr3R 28253344 28253366 chr3R 28255854 28255876 jockey 7 2510 3.0 5.0 4.0 1.4 2532 chr3R 28253344 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255876 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-301_75b 1955 chr3R 28302105 28302136 chr3R 28302543 28302575 jockey 16 439 3.5 7.5 5.5 2.5 470 chr3R 28302105 intergenic not near genes chr3R 28302340 intergenic not near genes chr3R 28302575 intergenic not near genes chr3R_16_28300001 chr3R_28300001 RAL-301_75b 1956 chr3R 28304629 28304658 chr3R 28304716 28304745 11 87 2.5 2.5 2.5 3.1 116 chr3R 28304629 intergenic CG12516 - chr3R 28304687 intergenic CG12516 - chr3R 28304745 intergenic CG12516 - chr3R_11_28300001 chr3R_28300001 RAL-301_75b 1957 chr3R 28307300 28307324 chr3R 28307501 28307525 9 201 3.0 9.0 6.0 1.3 225 chr3R 28307300 intergenic not near genes chr3R 28307412 intergenic not near genes chr3R 28307525 intergenic not near genes chr3R_9_28305001 chr3R_28305001 RAL-301_75b 1958 chr3R 28331508 28331522 chr3R 28331587 28331601 4 79 0.5 1.5 1.0 2.0 93 chr3R 28331508 intron larp - chr3R 28331554 intron larp - chr3R 28331601 intron larp - chr3R_4_28330001 chr3R_28330001 RAL-301_75b 1959 chr3R 28352514 28352543 chr3R 28352854 28352883 8 340 2.5 3.0 2.8 2.1 369 chr3R 28352514 exon Or98b + chr3R 28352698 exon Or98b + chr3R 28352883 exon Or98b + chr3R_8_28350001 chr3R_28350001 RAL-301_75b 1960 chr3R 28358872 28358883 chr3R 28359212 28359223 6 340 2.0 5.0 3.5 1.3 351 chr3R 28358872 intergenic not near genes chr3R 28359048 intergenic not near genes chr3R 28359223 intergenic not near genes chr3R_6_28355001 chr3R_28355001 RAL-301_75b 1961 chr3R 28380791 28380825 chr3R 28381024 28381059 7 233 0.0 4.0 2.0 2.3 268 chr3R 28380791 intergenic not near genes chr3R 28380925 intergenic not near genes chr3R 28381059 intergenic not near genes chr3R_7_28380001 chr3R_28380001 RAL-301_75b 1962 chr3R 28382152 28382172 chr3R 28382234 28382255 8 82 3.0 4.5 3.8 1.7 103 chr3R 28382152 intergenic not near genes chr3R 28382204 intergenic not near genes chr3R 28382255 intergenic not near genes chr3R_8_28380001 chr3R_28380001 RAL-301_75b 1963 chr3R 28393698 28393732 chr3R 28393798 28393832 7 100 2.0 2.0 2.0 2.3 134 chr3R 28393698 intergenic not near genes chr3R 28393765 intergenic not near genes chr3R 28393832 intergenic not near genes chr3R_7_28390001 chr3R_28390001 RAL-301_75b 1964 chr3R 28407707 28407737 chr3R 28407793 28407823 11 86 1.0 1.5 1.2 5.0 116 chr3R 28407707 intergenic not near genes chr3R 28407765 intergenic not near genes chr3R 28407823 intergenic not near genes chr3R_11_28405001 chr3R_28405001 RAL-301_75b 1965 chr3R 28468930 28468952 chr3R 28469013 28469038 7 85 1.5 2.0 1.8 2.5 108 chr3R 28468930 intron beat-VI + chr3R 28468984 intron beat-VI + chr3R 28469038 intron beat-VI + chr3R_7_28465001 chr3R_28465001 RAL-301_75b 1966 chr3R 28478422 28478442 chr3R 28478503 28478521 7 80 3.0 5.0 4.0 1.4 99 chr3R 28478422 intergenic not near genes chr3R 28478472 intergenic not near genes chr3R 28478521 intergenic not near genes chr3R_7_28475001 chr3R_28475001 RAL-301_75b 1967 chr3R 28479151 28479167 chr3R 28479234 28479250 9 83 2.5 2.5 2.5 2.6 99 chr3R 28479151 intergenic not near genes chr3R 28479200 intergenic not near genes chr3R 28479250 intergenic not near genes chr3R_9_28475001 chr3R_28475001 RAL-301_75b 1968 chr3R 28484353 28484373 chr3R 28486270 28486292 30 1917 48.0 77.0 62.5 0.5 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_30_28485001 chr3R_28485001 RAL-301_75b 1969 chr3R 28637358 28637383 chr3R 28637484 28637510 6 126 2.5 3.0 2.8 1.6 152 chr3R 28637358 exon CG9988 + chr3R 28637434 exon CG9988 + chr3R 28637510 exon CG9988 + chr3R_6_28635001 chr3R_28635001 RAL-301_75b 1970 chr3R 28643659 28643694 chr3R 28643749 28643785 16 90 0.5 2.5 1.5 6.4 126 chr3R 28643659 intergenic not near genes chr3R 28643722 intergenic not near genes chr3R 28643785 intergenic not near genes chr3R_16_28640001 chr3R_28640001 RAL-301_75b 1971 chr3R 28670631 28670649 chr3R 28670716 28670734 18 85 3.5 4.5 4.0 3.6 103 chr3R 28670631 intergenic CG9989 +,CG33346 + chr3R 28670682 intergenic CG9989 +,CG33346 + chr3R 28670734 5` UTR CG9989 + chr3R_18_28670001 chr3R_28670001 RAL-301_75b 1972 chr3R 28698362 28698394 chr3R 28698744 28698776 8 382 2.5 7.0 4.8 1.4 414 chr3R 28698362 intron htt + chr3R 28698569 intron htt + chr3R 28698776 intron htt + chr3R_8_28695001 chr3R_28695001 RAL-301_75b 1973 chr3R 28758284 28758303 chr3R 28763901 28763920 roo 6 5617 2.0 0.0 1.0 3.0 5636 chr3R 28758284 intergenic aqrs - chr3R 28761102 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-301_75b 1974 chr3R 28763905 28763920 chr3R 28771346 28771363 Stalker4 10 7442 0.0 4.5 2.2 3.1 7458 chr3R 28763905 intergenic not near genes chr3R 28767634 intergenic not near genes chr3R 28771363 intergenic not near genes chr3R_10_28765001 chr3R_28765001 RAL-301_75b 1975 chr3R 28792885 28792898 chr3R 28797980 28797989 jockey 7 5094 0.0 3.5 1.8 2.5 5104 chr3R 28792885 intergenic not near genes chr3R 28795437 intergenic not near genes chr3R 28797989 intergenic not near genes chr3R_7_28795001 chr3R_28795001 RAL-301_75b 1976 chr3R 28811570 28811604 chr3R 28811716 28811750 7 146 2.0 5.5 3.8 1.5 180 chr3R 28811570 intergenic wdn - chr3R 28811660 intergenic wdn -,CG1646 + chr3R 28811750 intergenic CG1646 +,wdn - chr3R_7_28810001 chr3R_28810001 RAL-301_75b 1977 chr3R 21907534 21907534 chr3R 28831798 28831804 72 6924266 13.5 10.0 11.8 5.6 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_72_25365001 chr3R_25365001 RAL-301_75b 1978 chr3R 29034467 29034486 chr3R 29034550 29034568 6 83 7.5 2.0 4.8 1.0 101 chr3R 29034467 intergenic Cpsf100 +,CR45044 +,beta4GalNAcTB - chr3R 29034518 intergenic Cpsf100 +,CR45044 + chr3R 29034568 intergenic Cpsf100 +,CR45044 + chr3R_6_29030001 chr3R_29030001 RAL-301_75b 1979 chr3R 29128511 29128515 chr3R 29128601 29128605 4 90 0.0 11.0 5.5 0.6 94 chr3R 29128511 intergenic dgt6 -,CG11880 + chr3R 29128558 intergenic dgt6 -,CG11880 + chr3R 29128605 3` UTR dgt6 - chr3R_4_29125001 chr3R_29125001 RAL-301_75b 1980 chr3R 29237268 29237285 chr3R 29239289 29239306 5 2021 19.5 9.5 14.5 0.3 2038 chr3R 29237268 exon CG11951 - chr3R 29238287 intron CG11951 - chr3R 29239306 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-301_75b 1981 chr3R 29240470 29240495 chr3R 29240554 29240579 8 84 1.5 4.0 2.8 2.1 109 chr3R 29240470 intergenic CG31427 -,CG31445 - chr3R 29240524 intergenic CG31445 -,CG31427 - chr3R 29240579 3` UTR CG31445 - chr3R_8_29240001 chr3R_29240001 RAL-301_75b 1982 chr3R 29319832 29319860 chr3R 29320151 29320179 jockey 5 319 1.5 3.0 2.2 1.6 347 chr3R 29319832 intergenic Cnx99A - chr3R 29320006 intergenic Cnx99A - chr3R 29320179 intergenic not near genes chr3R_5_29320001 chr3R_29320001 RAL-301_75b 1983 chr3R 29406631 29406642 chr3R 29407915 29407928 jockey 11 1286 0.5 5.0 2.8 2.9 1297 chr3R 29406631 intron Ptp99A + chr3R 29407280 intron Ptp99A + chr3R 29407928 intron Ptp99A + chr3R_11_29405001 chr3R_29405001 RAL-301_75b 1984 chr3R 29412029 29412049 chr3R 29412105 29412128 13 78 1.0 3.0 2.0 4.3 99 chr3R 29412029 intron Ptp99A + chr3R 29412078 intron Ptp99A + chr3R 29412128 intron Ptp99A + chr3R_13_29410001 chr3R_29410001 RAL-301_75b 1985 chr3R 29412969 29412997 chr3R 29413319 29413347 15 350 2.5 3.0 2.8 3.9 378 chr3R 29412969 intron Ptp99A + chr3R 29413158 intron Ptp99A + chr3R 29413347 intron Ptp99A + chr3R_15_29410001 chr3R_29410001 RAL-301_75b 1986 chr3R 29433605 29433636 chr3R 29433696 29433727 12 90 3.0 0.5 1.8 4.3 122 chr3R 29433605 intron Ptp99A + chr3R 29433666 intron Ptp99A + chr3R 29433727 intron Ptp99A + chr3R_12_29430001 chr3R_29430001 RAL-301_75b 1987 chr3R 29510166 29510197 chr3R 29510243 29510273 4 76 1.0 1.0 1.0 2.0 107 chr3R 29510166 intergenic not near genes chr3R 29510220 intergenic not near genes chr3R 29510273 intergenic not near genes chr3R_4_29510001 chr3R_29510001 RAL-301_75b 1988 chr3R 29526233 29526263 chr3R 29526320 29526350 10 87 2.0 4.0 3.0 2.5 117 chr3R 29526233 intergenic not near genes chr3R 29526292 intergenic not near genes chr3R 29526350 intergenic not near genes chr3R_10_29525001 chr3R_29525001 RAL-301_75b 1989 chr3R 29590377 29590403 chr3R 29590470 29590496 13 93 1.5 2.0 1.8 4.6 119 chr3R 29590377 intron CG31041 - chr3R 29590436 intron CG31041 - chr3R 29590496 intron CG31041 - chr3R_13_29590001 chr3R_29590001 RAL-301_75b 1990 chr3R 29604042 29604069 chr3R 29604119 29604148 8 78 4.0 4.0 4.0 1.6 106 chr3R 29604042 intron alph + chr3R 29604095 intron alph + chr3R 29604148 intron alph + chr3R_8_29600001 chr3R_29600001 RAL-301_75b 1991 chr3R 29609171 29609198 chr3R 29609260 29609287 9 89 1.5 3.0 2.2 2.8 116 chr3R 29609171 intron alph + chr3R 29609229 intron alph + chr3R 29609287 intron alph + chr3R_9_29605001 chr3R_29605001 RAL-301_75b 1992 chr3R 29708554 29708589 chr3R 29708632 29708667 7 76 1.5 1.5 1.5 2.8 113 chr3R 29708554 intergenic not near genes chr3R 29708610 intergenic not near genes chr3R 29708667 intergenic not near genes chr3R_7_29705001 chr3R_29705001 RAL-301_75b 1993 chr3R 29738268 29738300 chr3R 29739735 29739767 hobo 8 1467 4.0 4.5 4.2 1.5 1499 chr3R 29738268 intergenic CG1969 +,CG7598 + chr3R 29739018 intron CG1969 + chr3R 29739767 5` UTR CG1969 + chr3R_8_29735001 chr3R_29735001 RAL-301_75b 1994 chr3R 29745640 29745672 chr3R 29745717 29745749 8 76 3.0 0.0 1.5 3.2 109 chr3R 29745640 exon IntS11 + chr3R 29745694 intron IntS11 + chr3R 29745749 intron IntS11 + chr3R_8_29745001 chr3R_29745001 RAL-301_75b 1995 chr3R 29760360 29760393 chr3R 29761561 29761593 pogo 9 1201 1.5 1.0 1.2 4.1 1233 chr3R 29760360 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761593 intergenic not near genes chr3R_9_29760001 chr3R_29760001 RAL-301_75b 1996 chr3R 29854828 29854861 chr3R 29854908 29854941 10 80 3.0 3.0 3.0 2.5 113 chr3R 29854828 3` UTR dgt1 - chr3R 29854884 exon dgt1 - chr3R 29854941 exon dgt1 - chr3R_10_29850001 chr3R_29850001 RAL-301_75b 1997 chr3R 29881023 29881032 chr3R 29881109 29881118 5 86 3.0 4.0 3.5 1.1 95 chr3R 29881023 intron CG31038 + chr3R 29881070 intron CG31038 + chr3R 29881118 intron CG31038 + chr3R_5_29880001 chr3R_29880001 RAL-301_75b 1998 chr3R 29882025 29882051 chr3R 29891182 29891208 roo 9 9157 2.0 5.0 3.5 2.0 9183 chr3R 29882025 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891208 intron CG31038 + chr3R_9_29885001 chr3R_29885001 RAL-301_75b 1999 chr3R 29923609 29923635 chr3R 29925456 29925482 6 1848 7.0 35.5 21.2 0.3 1873 chr3R 29923609 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924546 exon Jon99Cii - chr3R 29925482 exon Jon99Ci - chr3R_6_29920001 chr3R_29920001 RAL-301_75b 2000 chr3R 29960472 29960484 chr3R 29960665 29960678 8 194 2.0 2.5 2.2 2.5 206 chr3R 29960472 intron TkR99D - chr3R 29960575 intron TkR99D - chr3R 29960678 intron TkR99D - chr3R_8_29960001 chr3R_29960001 RAL-301_75b 2001 chr3R 29963486 29963507 chr3R 29963588 29963609 8 101 0.5 1.0 0.8 4.4 123 chr3R 29963486 intron TkR99D - chr3R 29963548 intron TkR99D - chr3R 29963609 intron TkR99D - chr3R_8_29960001 chr3R_29960001 RAL-301_75b 2002 chr3R 29966068 29966073 chr3R 29966145 29966147 4 76 0.5 5.0 2.8 1.1 79 chr3R 29966068 intron TkR99D - chr3R 29966108 intron TkR99D - chr3R 29966147 intron TkR99D - chr3R_4_29965001 chr3R_29965001 RAL-301_75b 2003 chr3R 30084850 30084878 chr3R 30086317 30086345 hobo 5 1467 2.0 4.5 3.2 1.2 1495 chr3R 30084850 intron sima + chr3R 30085598 intron sima + chr3R 30086345 intron sima + chr3R_5_30085001 chr3R_30085001 RAL-301_75b 2004 chr3R 30175694 30175728 chr3R 30175780 30175814 7 85 2.5 2.0 2.2 2.2 120 chr3R 30175694 intergenic CG1983 - chr3R 30175754 intergenic CG1983 - chr3R 30175814 3` UTR CG1983 - chr3R_7_30175001 chr3R_30175001 RAL-301_75b 2005 chr3R 30238761 30238778 chr3R 30239925 30239942 1360 10 1164 7.5 1.5 4.5 1.8 1181 chr3R 30238761 intergenic not near genes chr3R 30239352 intergenic not near genes chr3R 30239942 intergenic not near genes chr3R_10_30235001 chr3R_30235001 RAL-301_75b 2006 chr3R 30260371 30260396 chr3R 30260447 30260471 11 76 3.0 5.0 4.0 2.2 100 chr3R 30260371 intergenic not near genes chr3R 30260421 intergenic not near genes chr3R 30260471 intergenic not near genes chr3R_11_30260001 chr3R_30260001 RAL-301_75b 2007 chr3R 30268420 30268447 chr3R 30268499 30268528 5 81 1.5 8.0 4.8 0.9 108 chr3R 30268420 intergenic not near genes chr3R 30268474 intergenic not near genes chr3R 30268528 intergenic not near genes chr3R_5_30265001 chr3R_30265001 RAL-301_75b 2008 chr3R 30307127 30307147 chr3R 30307203 30307226 7 80 0.0 3.5 1.8 2.5 99 chr3R 30307127 intron hdc + chr3R 30307176 intron hdc + chr3R 30307226 intron hdc + chr3R_7_30305001 chr3R_30305001 RAL-301_75b 2009 chr3R 30332029 30332062 chr3R 30332108 30332141 9 79 3.0 1.0 2.0 3.0 112 chr3R 30332029 intron hdc + chr3R 30332085 intron hdc + chr3R 30332141 intron hdc + chr3R_9_30330001 chr3R_30330001 RAL-301_75b 2010 chr3R 30375537 30375570 chr3R 30383162 30383195 412 6 7625 1.0 3.0 2.0 2.0 7658 chr3R 30375537 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383195 intergenic not near genes chr3R_6_30375001 chr3R_30375001 RAL-301_75b 2011 chr3R 30396217 30396240 chr3R 30404482 30404506 roo 7 8266 5.0 8.0 6.5 0.9 8289 chr3R 30396217 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404506 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-301_75b 2012 chr3R 30422940 30422967 chr3R 30423038 30423064 10 97 3.5 7.0 5.2 1.6 124 chr3R 30422940 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30423002 intergenic CG15535 -,CG2217 -,CG42740 - chr3R 30423064 3` UTR CG15535 - chr3R_10_30420001 chr3R_30420001 RAL-301_75b 2013 chr3R 30456399 30456425 chr3R 30456479 30456500 14 79 1.0 1.0 1.0 7.0 101 chr3R 30456399 intergenic CG2224 - chr3R 30456450 3` UTR CG2224 - chr3R 30456500 3` UTR CG2224 - chr3R_14_30455001 chr3R_30455001 RAL-301_75b 2014 chr3R 30458016 30458048 chr3R 30458096 30458128 16 80 3.0 7.0 5.0 2.7 112 chr3R 30458016 intron CG2224 - chr3R 30458072 intron CG2224 - chr3R 30458128 intron CG2224 - chr3R_16_30455001 chr3R_30455001 RAL-301_75b 2015 chr3R 30480472 30480504 chr3R 30482940 30482970 jockey 5 2467 3.5 3.0 3.2 1.2 2498 chr3R 30480472 intron PH4alphaEFB + chr3R 30481721 intron PH4alphaEFB + chr3R 30482970 intron PH4alphaEFB + chr3R_5_30480001 chr3R_30480001 RAL-301_75b 2016 chr3R 30566050 30566074 chr3R 30566265 30566289 6 213 0.0 4.0 2.0 2.0 239 chr3R 30566050 intron tmod + chr3R 30566170 intron tmod + chr3R 30566289 intron tmod + chr3R_6_30565001 chr3R_30565001 RAL-301_75b 2017 chr3R 30568324 30568355 chr3R 30568433 30568463 13 108 2.5 2.0 2.2 4.1 139 chr3R 30568324 intron tmod + chr3R 30568394 intron tmod + chr3R 30568463 intron tmod + chr3R_13_30565001 chr3R_30565001 RAL-301_75b 2018 chr3R 30620935 30620948 chr3R 30621090 30621103 6 155 3.5 4.0 3.8 1.2 168 chr3R 30620935 intron CG44954 - chr3R 30621019 intron CG44954 - chr3R 30621103 intron CG44954 - chr3R_6_30620001 chr3R_30620001 RAL-301_75b 2019 chr3R 30627603 30627636 chr3R 30627683 30627716 5 79 4.5 3.0 3.8 1.0 113 chr3R 30627603 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627716 exon CG2267 - chr3R_5_30625001 chr3R_30625001 RAL-301_75b 2020 chr3R 30663550 30663582 chr3R 30663636 30663668 8 86 0.0 5.0 2.5 2.3 118 chr3R 30663550 intergenic not near genes chr3R 30663609 intergenic not near genes chr3R 30663668 intergenic not near genes chr3R_8_30660001 chr3R_30660001 RAL-301_75b 2021 chr3R 30700865 30700872 chr3R 30700988 30700995 9 123 6.0 0.0 3.0 2.2 130 chr3R 30700865 intergenic not near genes chr3R 30700930 intergenic not near genes chr3R 30700995 intergenic not near genes chr3R_9_30700001 chr3R_30700001 RAL-301_75b 2022 chr3R 30818810 30818846 chr3R 30820375 30820411 1360 12 1565 4.0 5.5 4.8 2.1 1601 chr3R 30818810 intron cindr + chr3R 30819610 intron cindr + chr3R 30820411 intron cindr + chr3R_12_30815001 chr3R_30815001 RAL-301_75b 2023 chr3R 30850257 30850269 chr3R 30850350 30850361 11 93 0.0 5.0 2.5 3.1 104 chr3R 30850257 intergenic not near genes chr3R 30850309 intergenic not near genes chr3R 30850361 intergenic not near genes chr3R_11_30850001 chr3R_30850001 RAL-301_75b 2024 chr3R 30862422 30862442 chr3R 30862530 30862550 8 108 0.5 2.5 1.5 3.2 128 chr3R 30862422 intergenic not near genes chr3R 30862486 intergenic not near genes chr3R 30862550 intergenic not near genes chr3R_8_30860001 chr3R_30860001 RAL-301_75b 2025 chr3R 30985688 30985714 chr3R 30985772 30985797 6 84 4.0 4.5 4.2 1.2 109 chr3R 30985688 intron 5-HT7 - chr3R 30985742 intron 5-HT7 - chr3R 30985797 intron 5-HT7 - chr3R_6_30985001 chr3R_30985001 RAL-301_75b 2026 chr3R 30996635 30996656 chr3R 30996859 30996877 14 224 6.5 2.0 4.2 2.7 242 chr3R 30996635 intron 5-HT7 - chr3R 30996756 intron 5-HT7 - chr3R 30996877 intron 5-HT7 - chr3R_14_30995001 chr3R_30995001 RAL-301_75b 2027 chr3R 31026489 31026517 chr3R 31026570 31026596 8 81 3.5 1.5 2.5 2.3 107 chr3R 31026489 intergenic not near genes chr3R 31026542 intergenic not near genes chr3R 31026596 intergenic not near genes chr3R_8_31025001 chr3R_31025001 RAL-301_75b 2028 chr3R 31042112 31042136 chr3R 31042199 31042223 13 87 4.0 5.0 4.5 2.4 111 chr3R 31042112 intron CanA1 + chr3R 31042168 intron CanA1 + chr3R 31042223 intron CanA1 + chr3R_13_31040001 chr3R_31040001 RAL-301_75b 2029 chr3R 31069656 31069666 chr3R 31069751 31069761 6 94 3.5 5.0 4.2 1.2 105 chr3R 31069656 intron Sox100B + chr3R 31069708 intron Sox100B + chr3R 31069761 intron Sox100B + chr3R_6_31065001 chr3R_31065001 RAL-301_75b 2030 chr3R 31074232 31074253 chr3R 31081830 31081851 springer 6 7598 2.5 0.0 1.2 2.7 7619 chr3R 31074232 intron Sox100B + chr3R 31078042 intron Sox100B + chr3R 31081851 intron Sox100B + chr3R_6_31075001 chr3R_31075001 RAL-301_75b 2031 chr3R 31188027 31188053 chr3R 31188129 31188155 9 101 2.0 5.0 3.5 2.0 128 chr3R 31188027 intron mesh - chr3R 31188091 intron mesh - chr3R 31188155 intron mesh - chr3R_9_31185001 chr3R_31185001 RAL-301_75b 2032 chr3R 31279375 31279391 chr3R 31285566 31285582 diver 14 6190 7.5 2.0 4.8 2.4 6207 chr3R 31279375 intergenic not near genes chr3R 31282478 intergenic not near genes chr3R 31285582 intergenic not near genes chr3R_14_31280001 chr3R_31280001 RAL-301_75b 2033 chr3R 31295365 31295373 chr3R 31295450 31295459 9 86 3.5 5.0 4.2 1.7 94 chr3R 31295365 intergenic not near genes chr3R 31295412 intergenic not near genes chr3R 31295459 intergenic not near genes chr3R_9_31295001 chr3R_31295001 RAL-301_75b 2034 chr3R 31354863 31354879 chr3R 31354943 31354959 6 80 2.0 10.5 6.2 0.8 96 chr3R 31354863 intron CG34347 + chr3R 31354911 intron CG34347 + chr3R 31354959 intron CG34347 + chr3R_6_31350001 chr3R_31350001 RAL-301_75b 2035 chr3R 31413087 31413123 chr3R 31418287 31418323 copia 9 5200 4.0 0.0 2.0 3.0 5236 chr3R 31413087 intron Gprk2 + chr3R 31415705 intron Gprk2 + chr3R 31418323 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 RAL-301_75b 2036 chr3R 31435361 31435390 chr3R 31435513 31435542 15 152 3.0 2.5 2.8 3.9 181 chr3R 31435361 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435542 intron Gprk2 + chr3R_15_31435001 chr3R_31435001 RAL-301_75b 2037 chr3R 31530818 31530849 chr3R 31531145 31531175 9 326 2.0 4.0 3.0 2.2 357 chr3R 31530818 intergenic not near genes chr3R 31530996 intergenic not near genes chr3R 31531175 intergenic not near genes chr3R_9_31530001 chr3R_31530001 RAL-301_75b 2038 chr3R 31557997 31558021 chr3R 31558075 31558099 10 78 8.0 2.0 5.0 1.7 102 chr3R 31557997 intron nyo + chr3R 31558048 intron nyo + chr3R 31558099 intron nyo + chr3R_10_31555001 chr3R_31555001 RAL-301_75b 2039 chr3R 31691547 31691551 chr3R 31696312 31696317 Doc 5 4766 1.5 7.5 4.5 0.9 4770 chr3R 31691547 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696317 intergenic not near genes chr3R_5_31690001 chr3R_31690001 RAL-301_75b 2040 chr3R 31699737 31699749 chr3R 31699819 31699831 10 81 0.5 4.5 2.5 2.9 94 chr3R 31699737 intergenic not near genes chr3R 31699784 intergenic not near genes chr3R 31699831 intergenic not near genes chr3R_10_31695001 chr3R_31695001 RAL-301_75b 2041 chr3R 31831539 31831569 chr3R 31831618 31831647 9 79 3.5 1.5 2.5 2.6 108 chr3R 31831539 intron RhoGAP100F + chr3R 31831593 intron RhoGAP100F + chr3R 31831647 intron RhoGAP100F + chr3R_9_31830001 chr3R_31830001 RAL-301_75b 2042 chr3R 31925689 31925724 chr3R 31925765 31925800 8 76 1.0 1.5 1.2 3.6 111 chr3R 31925689 intron heph - chr3R 31925744 intron heph - chr3R 31925800 intron heph - chr3R_8_31925001 chr3R_31925001 RAL-301_75b 2043 chr3R 31931194 31931211 chr3R 31931277 31931294 13 83 5.0 3.0 4.0 2.6 100 chr3R 31931194 intron heph - chr3R 31931244 intron heph - chr3R 31931294 intron heph - chr3R_13_31930001 chr3R_31930001 RAL-301_75b 2044 chr3R 31991114 31991138 chr3R 31991193 31991217 4 79 1.5 9.5 5.5 0.6 103 chr3R 31991114 intron heph - chr3R 31991166 intron heph - chr3R 31991217 intron heph - chr3R_4_31990001 chr3R_31990001 RAL-301_75b 2045 chr3R 31997990 31998020 chr3R 32005460 32005484 blood 9 7469 3.0 1.0 2.0 3.0 7494 chr3R 31997990 intron heph - chr3R 32001737 intron heph - chr3R 32005484 intron heph - chr3R_9_32000001 chr3R_32000001 RAL-301_75b 2046 chr3R 32034264 32034285 chr3R 32034347 32034368 7 83 4.0 2.0 3.0 1.8 104 chr3R 32034264 intergenic not near genes chr3R 32034316 intergenic not near genes chr3R 32034368 intergenic not near genes chr3R_7_32030001 chr3R_32030001 RAL-301_75b 2047 chr3R 32061687 32061713 chr3R 32062034 32062058 23 345 29.5 22.5 26.0 0.9 371 chr3R 32061687 intron Map205 - chr3R 32061872 intron Map205 - chr3R 32062058 intron Map205 - chr3R_23_32060001 chr3R_32060001 RAL-301_75b 2048 chr4 76493 76504 chr4 81936 81947 I-element 6 5442 4.0 4.0 4.0 1.2 5454 chr4 76493 intron pan + chr4 79220 intron pan + chr4 81947 intron pan + chr4_6_75001 chr4_75001 RAL-301_75b 2049 chr4 216676 216697 chr4 216759 216780 7 83 1.0 3.5 2.2 2.2 104 chr4 216676 intron CG31999 - chr4 216728 intron CG31999 - chr4 216780 intron CG31999 - chr4_7_215001 chr4_215001 RAL-301_75b 2050 chr4 671603 671634 chr4 680186 680217 Tirant 12 8583 3.5 5.0 4.2 2.3 8614 chr4 671603 intron CG11360 + chr4 675910 intron CG11360 + chr4 680217 intron CG11360 + chr4_12_675001 chr4_675001 RAL-301_75b 2051 chr4 694928 694934 chr4 695007 695015 4 80 4.0 2.5 3.2 1.0 87 chr4 694928 intron myo - chr4 694972 intron myo - chr4 695015 intron myo - chr4_4_690001 chr4_690001 RAL-301_75b 2052 chr4 847119 847126 chr4 847315 847322 6 195 3.5 2.5 3.0 1.5 203 chr4 847119 intergenic not near genes chr4 847220 intergenic not near genes chr4 847322 intergenic not near genes chr4_6_845001 chr4_845001 RAL-301_75b 2053 chr4 959623 959655 chr4 959800 959834 15 179 2.0 1.0 1.5 6.0 211 chr4 959623 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959834 5` UTR CR44030 + chr4_15_955001 chr4_955001 RAL-301_75b 2054 chr4 972497 972521 chr4 972579 972602 7 82 0.5 2.0 1.2 3.2 105 chr4 972497 intron fuss - chr4 972550 intron fuss - chr4 972602 intron fuss - chr4_7_970001 chr4_970001 RAL-301_75b 2055 chr4 1008511 1008531 chr4 1008714 1008731 7 203 2.5 3.5 3.0 1.8 220 chr4 1008511 intergenic not near genes chr4 1008621 intergenic not near genes chr4 1008731 intergenic not near genes chr4_7_1005001 chr4_1005001 RAL-301_75b 2056 chr4 1171951 1171980 chr4 1172213 1172245 11 265 1.5 1.0 1.2 5.0 294 chr4 1171951 intergenic not near genes chr4 1172098 intergenic pho - chr4 1172245 intergenic pho - chr4_11_1170001 chr4_1170001 RAL-301_75b 2057 chrX 136293 136299 chrX 136369 136376 4 77 1.0 7.0 4.0 0.8 83 chrX 136293 intron RhoGAP1A + chrX 136334 intron RhoGAP1A + chrX 136376 intron RhoGAP1A + chrX_4_135001 chrX_135001 RAL-301_75b 2058 chrX 318471 318497 chrX 323556 323582 flea 6 5086 4.5 4.0 4.2 1.2 5111 chrX 318471 intron,intron CG3777 +,CG32816 - chrX 321026 intron,intron CG3777 +,CG32816 - chrX 323582 intron,intron CG3777 +,CG32816 - chrX_6_320001 chrX_320001 RAL-301_75b 2059 chrX 428426 428452 chrX 434611 434637 3S18 8 6185 2.5 3.0 2.8 2.1 6211 chrX 428426 intron CG32816 - chrX 431532 intron CG32816 - chrX 434637 intron CG32816 - chrX_8_430001 chrX_430001 RAL-301_75b 2060 chrX 551432 551449 chrX 558994 559011 412 4 7562 1.5 3.0 2.2 1.2 7579 chrX 551432 intron Appl + chrX 555222 intron Appl + chrX 559011 intron Appl + chrX_4_555001 chrX_555001 RAL-301_75b 2061 chrX 713289 713301 chrX 713629 713641 7 340 0.5 1.0 0.8 3.9 352 chrX 713289 intron sdk + chrX 713465 intron sdk + chrX 713641 intron sdk + chrX_7_710001 chrX_710001 RAL-301_75b 2062 chrX 812294 812297 chrX 817924 817928 297 5 5631 2.0 3.5 2.8 1.3 5634 chrX 812294 intron CG43867 - chrX 815111 intron CG43867 - chrX 817928 intron CG43867 - chrX_5_815001 chrX_815001 RAL-301_75b 2063 chrX 827604 827634 chrX 835396 835426 roo 15 7792 2.5 2.0 2.2 4.7 7822 chrX 827604 intron CG43867 - chrX 831515 intron CG43867 - chrX 835426 intron CG43867 - chrX_15_830001 chrX_830001 RAL-301_75b 2064 chrX 906702 906722 chrX 908491 908511 S-element 10 1789 4.0 5.5 4.8 1.7 1809 chrX 906702 intron CG43867 - chrX 907606 intron CG43867 - chrX 908511 intron CG43867 - chrX_10_905001 chrX_905001 RAL-301_75b 2065 chrX 1053117 1053120 chrX 16983076 16983077 9 15929959 11.5 15.0 13.2 0.6 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_9_9015001 chrX_9015001 RAL-301_75b 2066 chrX 1205523 1205558 chrX 1205603 1205639 13 81 0.5 1.5 1.0 6.5 116 chrX 1205523 intergenic CG11381 + chrX 1205581 intergenic CG11381 + chrX 1205639 intergenic CG11381 + chrX_13_1205001 chrX_1205001 RAL-301_75b 2067 chrX 1253730 1253761 chrX 1253812 1253842 10 82 8.5 2.5 5.5 1.5 112 chrX 1253730 intron Atf3 - chrX 1253786 intron Atf3 - chrX 1253842 intron Atf3 - chrX_10_1250001 chrX_1250001 RAL-301_75b 2068 chrX 1357780 1357808 chrX 1367950 1367978 Doc 14 10170 5.0 3.5 4.2 2.7 10198 chrX 1357780 intergenic png - chrX 1362879 intergenic not near genes chrX 1367978 intergenic not near genes chrX_14_1360001 chrX_1360001 RAL-301_75b 2069 chrX 1428595 1428621 chrX 1428679 1428707 13 85 3.0 2.5 2.8 3.4 112 chrX 1428595 intron futsch + chrX 1428651 intron futsch + chrX 1428707 intron futsch + chrX_13_1425001 chrX_1425001 RAL-301_75b 2070 chrX 1518050 1518073 chrX 1523451 1523475 jockey 12 5401 1.0 2.0 1.5 4.8 5425 chrX 1518050 intergenic inc + chrX 1520762 intergenic not near genes chrX 1523475 intergenic not near genes chrX_12_1520001 chrX_1520001 RAL-301_75b 2071 chrX 1627985 1627998 chrX 1635453 1635466 gtwin 7 7468 3.5 7.0 5.2 1.1 7481 chrX 1627985 intron,intron Mur2B -,br + chrX 1631726 intron,intron Mur2B -,br + chrX 1635466 intron,intron Mur2B -,br + chrX_7_1630001 chrX_1630001 RAL-301_75b 2072 chrX 1930537 1930556 chrX 1938107 1938127 opus 8 7570 5.0 3.5 4.2 1.5 7590 chrX 1930537 intergenic CG11596 + chrX 1934332 intergenic not near genes chrX 1938127 3` UTR CG3857 - chrX_8_1930001 chrX_1930001 RAL-301_75b 2073 chrX 1954889 1954913 chrX 1962829 1962852 Stalker2 6 7938 0.0 0.5 0.2 5.0 7963 chrX 1954889 intron Hr4 + chrX 1958870 intron Hr4 + chrX 1962852 intron Hr4 + chrX_6_1955001 chrX_1955001 RAL-301_75b 2074 chrX 2385741 2385762 chrX 2385818 2385839 12 77 1.0 1.0 1.0 6.0 98 chrX 2385741 intron PsGEF - chrX 2385790 intron PsGEF - chrX 2385839 intron PsGEF - chrX_12_2385001 chrX_2385001 RAL-301_75b 2075 chrX 2399845 2399863 chrX 2408197 2408215 roo 5 8353 4.5 0.0 2.2 1.6 8370 chrX 2399845 intergenic not near genes chrX 2404030 intergenic not near genes chrX 2408215 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-301_75b 2076 chrX 2429455 2429479 chrX 2429542 2429566 10 87 5.0 0.0 2.5 2.9 111 chrX 2429455 intergenic gt - chrX 2429510 intergenic not near genes chrX 2429566 intergenic not near genes chrX_10_2425001 chrX_2425001 RAL-301_75b 2077 chrX 2552808 2552825 chrX 2552931 2552947 8 124 1.0 3.0 2.0 2.7 139 chrX 2552808 intron Pdfr + chrX 2552878 intron Pdfr + chrX 2552947 intron Pdfr + chrX_8_2550001 chrX_2550001 RAL-301_75b 2078 chrX 2578815 2578845 chrX 2578919 2578949 12 104 2.5 0.5 1.5 4.8 134 chrX 2578815 intergenic Pdfr +,Vha36-3 - chrX 2578882 intergenic Vha36-3 -,Pdfr + chrX 2578949 intergenic Vha36-3 -,Pdfr + chrX_12_2575001 chrX_2575001 RAL-301_75b 2079 chrX 2610387 2610396 chrX 2617504 2617512 HMS-Beagle 9 7117 8.5 1.0 4.8 1.6 7125 chrX 2610387 intergenic CG8636 - chrX 2613950 intergenic not near genes chrX 2617512 intergenic Tsp3A - chrX_9_2610001 chrX_2610001 RAL-301_75b 2080 chrX 2635373 2635391 chrX 2635482 2635500 9 108 3.5 8.5 6.0 1.3 127 chrX 2635373 intron sgg + chrX 2635436 intron sgg + chrX 2635500 intron sgg + chrX_9_2635001 chrX_2635001 RAL-301_75b 2081 chrX 2656761 2656790 chrX 2656908 2656937 4 147 0.5 3.0 1.8 1.4 176 chrX 2656761 intron sgg + chrX 2656849 intron sgg + chrX 2656937 intron sgg + chrX_4_2655001 chrX_2655001 RAL-301_75b 2082 chrX 2664383 2664399 chrX 2665529 2665544 1360 4 1146 7.5 3.0 5.2 0.6 1161 chrX 2664383 intron sgg + chrX 2664964 intron sgg + chrX 2665544 intron sgg + chrX_4_2660001 chrX_2660001 RAL-301_75b 2083 chrX 2807361 2807392 chrX 2807456 2807486 11 95 5.5 4.5 5.0 1.8 125 chrX 2807361 intron kirre + chrX 2807424 intron kirre + chrX 2807486 intron kirre + chrX_11_2805001 chrX_2805001 RAL-301_75b 2084 chrX 2840852 2840864 chrX 2840935 2840945 6 82 10.0 1.5 5.8 0.9 93 chrX 2840852 intron kirre + chrX 2840898 intron kirre + chrX 2840945 intron kirre + chrX_6_2840001 chrX_2840001 RAL-301_75b 2085 chrX 2844897 2844933 chrX 2852307 2852343 mdg1 11 7410 2.0 3.0 2.5 3.1 7446 chrX 2844897 intron kirre + chrX 2848620 intron kirre + chrX 2852343 intron kirre + chrX_11_2845001 chrX_2845001 RAL-301_75b 2086 chrX 3005303 3005326 chrX 3005379 3005402 9 76 2.0 0.0 1.0 4.5 99 chrX 3005303 intron kirre + chrX 3005352 intron kirre + chrX 3005402 intron kirre + chrX_9_3005001 chrX_3005001 RAL-301_75b 2087 chrX 3058022 3058049 chrX 3058261 3058290 pogo 5 240 2.0 1.0 1.5 2.0 268 chrX 3058022 intron kirre + chrX 3058156 intron kirre + chrX 3058290 intron kirre + chrX_5_3055001 chrX_3055001 RAL-301_75b 2088 chrX 3075634 3075661 chrX 3080940 3080967 Transpac 8 5306 1.0 3.5 2.2 2.5 5333 chrX 3075634 intron kirre + chrX 3078300 intron kirre + chrX 3080967 intron kirre + chrX_8_3075001 chrX_3075001 RAL-301_75b 2089 chrX 3203465 3203493 chrX 3203664 3203692 10 199 4.0 3.5 3.8 2.1 227 chrX 3203465 intron dnc + chrX 3203578 intron dnc + chrX 3203692 intron dnc + chrX_10_3200001 chrX_3200001 RAL-301_75b 2090 chrX 3243625 3243661 chrX 3243715 3243751 11 90 1.0 2.0 1.5 4.4 126 chrX 3243625 intron dnc + chrX 3243688 intron dnc + chrX 3243751 intron dnc + chrX_11_3240001 chrX_3240001 RAL-301_75b 2091 chrX 3293194 3293223 chrX 3293360 3293389 4 166 1.0 1.0 1.0 2.0 195 chrX 3293194 intron dnc + chrX 3293292 intron dnc + chrX 3293389 intron dnc + chrX_4_3290001 chrX_3290001 RAL-301_75b 2092 chrX 3414349 3414373 chrX 3414476 3414500 5 127 0.5 4.0 2.2 1.6 151 chrX 3414349 intron,intron CR44999 +,CG12535 - chrX 3414424 intron,intron CR44999 +,CG12535 - chrX 3414500 intron,intron CR44999 +,CG12535 - chrX_5_3410001 chrX_3410001 RAL-301_75b 2093 chrX 3415018 3415050 chrX 3421202 3421235 3S18 14 6184 1.5 0.5 1.0 7.0 6217 chrX 3415018 intron,intron CR44999 +,CG12535 - chrX 3418126 intron,intron CR44999 +,CG12535 - chrX 3421235 intron,intron CR44999 +,CG12535 - chrX_14_3415001 chrX_3415001 RAL-301_75b 2094 chrX 3493091 3493121 chrX 3502250 3502280 roo 8 9159 0.0 2.5 1.2 3.6 9189 chrX 3493091 intron,intron CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502280 intron,intron CR44999 +,Gas8 - chrX_8_3495001 chrX_3495001 RAL-301_75b 2095 chrX 3513766 3513785 chrX 3513849 3513868 6 83 1.0 5.5 3.2 1.4 102 chrX 3513766 intron,intron CR44999 +,CG32791 - chrX 3513817 intron,intron CR44999 +,CG32791 - chrX 3513868 intron,intron CR44999 +,CG32791 - chrX_6_3510001 chrX_3510001 RAL-301_75b 2096 chrX 3597564 3597583 chrX 3619732 3619750 roo 16 22168 2.5 6.5 4.5 2.9 22186 chrX 3597564 intron AstA-R1 + chrX 3608657 intron AstA-R1 + chrX 3619750 intron AstA-R1 + chrX_16_3605001 chrX_3605001 RAL-301_75b 2097 chrX 3726770 3726790 chrX 3730167 3730187 NOF 10 3397 1.0 5.0 3.0 2.5 3417 chrX 3726770 intron tlk + chrX 3728478 intron tlk + chrX 3730187 intron tlk + chrX_10_3725001 chrX_3725001 RAL-301_75b 2098 chrX 3880472 3880485 chrX 3880558 3880571 4 86 1.5 1.5 1.5 1.6 99 chrX 3880472 intergenic VhaAC39-1 + chrX 3880522 intergenic VhaAC39-1 + chrX 3880571 intergenic VhaAC39-1 + chrX_4_3880001 chrX_3880001 RAL-301_75b 2099 chrX 3881269 3881304 chrX 3881407 3881443 10 139 5.0 1.0 3.0 2.5 174 chrX 3881269 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881443 intron VhaAC39-1 + chrX_10_3880001 chrX_3880001 RAL-301_75b 2100 chrX 3986864 3986893 chrX 3994497 3994526 412 8 7633 1.5 2.5 2.0 2.7 7662 chrX 3986864 intergenic not near genes chrX 3990695 intergenic not near genes chrX 3994526 intergenic not near genes chrX_8_3990001 chrX_3990001 RAL-301_75b 2101 chrX 4101896 4101897 chrX 4101976 4101977 4 80 0.0 3.5 1.8 1.4 81 chrX 4101896 exon CG15375 + chrX 4101936 exon CG15375 + chrX 4101977 exon CG15375 + chrX_4_4100001 chrX_4100001 RAL-301_75b 2102 chrX 4157914 4157918 chrX 4164967 4164971 297 4 7053 5.5 5.0 5.2 0.6 7057 chrX 4157914 intron Fas2 - chrX 4161442 intron Fas2 - chrX 4164971 intron Fas2 - chrX_4_4160001 chrX_4160001 RAL-301_75b 2103 chrX 4209952 4209957 chrX 4210042 4210046 6 90 0.0 6.5 3.2 1.4 94 chrX 4209952 intergenic not near genes chrX 4209999 intergenic not near genes chrX 4210046 intergenic not near genes chrX_6_4205001 chrX_4205001 RAL-301_75b 2104 chrX 4252958 4252975 chrX 4253045 4253063 8 88 5.5 3.0 4.2 1.5 105 chrX 4252958 intergenic CG15576 - chrX 4253010 intergenic CG15576 - chrX 4253063 intergenic CG15576 - chrX_8_4250001 chrX_4250001 RAL-301_75b 2105 chrX 4411465 4411469 chrX 4411546 4411550 4 80 4.0 4.0 4.0 0.8 85 chrX 4411465 intron CR32773 - chrX 4411508 intron CR32773 - chrX 4411550 intron CR32773 - chrX_4_4410001 chrX_4410001 RAL-301_75b 2106 chrX 4515834 4515857 chrX 4515912 4515935 6 78 2.5 5.5 4.0 1.2 101 chrX 4515834 intron CR32773 - chrX 4515884 intron CR32773 - chrX 4515935 intron CR32773 - chrX_6_4515001 chrX_4515001 RAL-301_75b 2107 chrX 4525757 4525770 chrX 4525849 4525862 5 92 0.5 1.5 1.0 2.5 105 chrX 4525757 intron CR32773 - chrX 4525810 intron CR32773 - chrX 4525862 intron CR32773 - chrX_5_4525001 chrX_4525001 RAL-301_75b 2108 chrX 4535468 4535477 chrX 4535545 4535554 9 77 4.5 1.5 3.0 2.2 86 chrX 4535468 intron CR32773 - chrX 4535511 intron CR32773 - chrX 4535554 intron CR32773 - chrX_9_4535001 chrX_4535001 RAL-301_75b 2109 chrX 4638648 4638666 chrX 4638784 4638803 12 137 1.5 1.5 1.5 4.8 155 chrX 4638648 exon pon + chrX 4638726 3` UTR pon + chrX 4638803 3` UTR pon + chrX_12_4635001 chrX_4635001 RAL-301_75b 2110 chrX 4700392 4700428 chrX 4700735 4700771 jockey 12 343 2.0 3.0 2.5 3.4 379 chrX 4700392 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700771 3` UTR ctp + chrX_12_4700001 chrX_4700001 RAL-301_75b 2111 chrX 4723577 4723585 chrX 4723657 4723665 7 79 3.5 3.0 3.2 1.7 88 chrX 4723577 intron Proc-R + chrX 4723621 intron Proc-R + chrX 4723665 intron Proc-R + chrX_7_4720001 chrX_4720001 RAL-301_75b 2112 chrX 4731816 4731831 chrX 4736908 4736924 jockey 5 5093 5.5 0.5 3.0 1.2 5108 chrX 4731816 intergenic not near genes chrX 4734370 intergenic not near genes chrX 4736924 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-301_75b 2113 chrX 4755421 4755433 chrX 4755498 4755509 9 76 0.0 4.0 2.0 3.0 88 chrX 4755421 intergenic not near genes chrX 4755465 intergenic not near genes chrX 4755509 intergenic not near genes chrX_9_4755001 chrX_4755001 RAL-301_75b 2114 chrX 4763263 4763279 chrX 4763751 4763767 Stalker4 6 488 0.5 5.5 3.0 1.5 504 chrX 4763263 intergenic not near genes chrX 4763515 intergenic not near genes chrX 4763767 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-301_75b 2115 chrX 4814494 4814528 chrX 4814575 4814609 16 81 0.0 0.0 0.0 16.0 115 chrX 4814494 intergenic not near genes chrX 4814552 intergenic not near genes chrX 4814609 intergenic not near genes chrX_16_4810001 chrX_4810001 RAL-301_75b 2116 chrX 4827968 4827985 chrX 4835339 4835356 Stalker4 7 7370 5.5 5.5 5.5 1.1 7388 chrX 4827968 intergenic not near genes chrX 4831662 intergenic not near genes chrX 4835356 intergenic not near genes chrX_7_4830001 chrX_4830001 RAL-301_75b 2117 chrX 4871207 4871231 chrX 4871307 4871331 13 99 1.5 2.5 2.0 4.3 124 chrX 4871207 intron CG42594 + chrX 4871269 intron CG42594 + chrX 4871331 intron CG42594 + chrX_13_4870001 chrX_4870001 RAL-301_75b 2118 chrX 4885785 4885807 chrX 4885878 4885900 9 93 3.5 2.0 2.8 2.4 115 chrX 4885785 intron CG42594 + chrX 4885842 intron CG42594 + chrX 4885900 intron CG42594 + chrX_9_4885001 chrX_4885001 RAL-301_75b 2119 chrX 4921588 4921612 chrX 4921683 4921707 9 95 1.0 6.5 3.8 1.9 119 chrX 4921588 3` UTR CG6903 + chrX 4921648 3` UTR CG6903 + chrX 4921707 3` UTR CG44774 - chrX_9_4920001 chrX_4920001 RAL-301_75b 2120 chrX 4931346 4931370 chrX 4931440 4931464 14 93 34.5 33.0 33.8 0.4 118 chrX 4931346 intron CG44774 - chrX 4931405 intron CG44774 - chrX 4931464 intron CG44774 - chrX_14_4930001 chrX_4930001 RAL-301_75b 2121 chrX 4990044 4990077 chrX 4997257 4997291 roo 6 7213 3.5 0.0 1.8 2.1 7247 chrX 4990044 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997291 intron CR44833 - chrX_6_4990001 chrX_4990001 RAL-301_75b 2122 chrX 5055856 5055875 chrX 5055988 5056007 7 132 2.0 3.0 2.5 2.0 151 chrX 5055856 intron,intron CR44833 -,ovo + chrX 5055932 intron,intron CR44833 -,ovo + chrX 5056007 intron,intron CR44833 -,ovo + chrX_7_5055001 chrX_5055001 RAL-301_75b 2123 chrX 5096274 5096305 chrX 5103839 5103870 springer 5 7565 0.5 3.5 2.0 1.7 7596 chrX 5096274 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103870 intron,intron CG15465 +,rg + chrX_5_5100001 chrX_5100001 RAL-301_75b 2124 chrX 5122840 5122849 chrX 5123067 5123076 5 228 0.0 0.0 0.0 5.0 236 chrX 5122840 intron,intron CG15465 +,rg + chrX 5122958 intron,intron CG15465 +,rg + chrX 5123076 intron,intron CG15465 +,rg + chrX_5_5120001 chrX_5120001 RAL-301_75b 2125 chrX 5147860 5147877 chrX 5147966 5147983 9 106 1.0 0.0 0.5 6.0 123 chrX 5147860 intron,intron CG15465 +,rg + chrX 5147922 intron,intron CG15465 +,rg + chrX 5147983 intron,intron CG15465 +,rg + chrX_9_5145001 chrX_5145001 RAL-301_75b 2126 chrX 5264046 5264079 chrX 5264136 5264168 16 90 1.0 3.5 2.2 5.0 122 chrX 5264046 intergenic not near genes chrX 5264107 intergenic not near genes chrX 5264168 intergenic not near genes chrX_16_5260001 chrX_5260001 RAL-301_75b 2127 chrX 5272821 5272851 chrX 5272908 5272938 5 86 3.0 2.5 2.8 1.3 117 chrX 5272821 intergenic not near genes chrX 5272880 intergenic not near genes chrX 5272938 intergenic not near genes chrX_5_5270001 chrX_5270001 RAL-301_75b 2128 chrX 5277561 5277575 chrX 5277734 5277748 9 173 4.5 0.5 2.5 2.6 187 chrX 5277561 intergenic not near genes chrX 5277654 intergenic not near genes chrX 5277748 intergenic not near genes chrX_9_5275001 chrX_5275001 RAL-301_75b 2129 chrX 5280115 5280127 chrX 5280331 5280343 7 216 5.0 3.0 4.0 1.4 228 chrX 5280115 intergenic not near genes chrX 5280229 intergenic not near genes chrX 5280343 intergenic not near genes chrX_7_5280001 chrX_5280001 RAL-301_75b 2130 chrX 5349275 5349306 chrX 5349352 5349383 6 77 3.5 1.0 2.2 1.9 108 chrX 5349275 intron SK + chrX 5349329 intron SK + chrX 5349383 intron SK + chrX_6_5345001 chrX_5345001 RAL-301_75b 2131 chrX 5366318 5366327 chrX 5366445 5366455 10 128 1.0 3.5 2.2 3.1 137 chrX 5366318 intron SK + chrX 5366386 intron SK + chrX 5366455 intron SK + chrX_10_5365001 chrX_5365001 RAL-301_75b 2132 chrX 5473586 5473609 chrX 5473662 5473685 7 75 1.5 4.0 2.8 1.8 99 chrX 5473586 intron SPR + chrX 5473636 intron SPR + chrX 5473685 intron SPR + chrX_7_5470001 chrX_5470001 RAL-301_75b 2133 chrX 5512053 5512055 chrX 5512136 5512138 5 83 6.0 0.0 3.0 1.2 85 chrX 5512053 intergenic not near genes chrX 5512096 intergenic not near genes chrX 5512138 intergenic not near genes chrX_5_5510001 chrX_5510001 RAL-301_75b 2134 chrX 5566484 5566499 chrX 5566571 5566586 4 86 4.0 2.5 3.2 1.0 102 chrX 5566484 intergenic not near genes chrX 5566535 intergenic not near genes chrX 5566586 intergenic not near genes chrX_4_5565001 chrX_5565001 RAL-301_75b 2135 chrX 5579545 5579548 chrX 5579667 5579671 4 123 3.5 6.0 4.8 0.7 126 chrX 5579545 intergenic not near genes chrX 5579608 intergenic not near genes chrX 5579671 intergenic not near genes chrX_4_5575001 chrX_5575001 RAL-301_75b 2136 chrX 5832450 5832483 chrX 5832633 5832665 7 183 0.5 3.5 2.0 2.3 215 chrX 5832450 intron CG15765 + chrX 5832558 intron CG15765 + chrX 5832665 intron CG15765 + chrX_7_5830001 chrX_5830001 RAL-301_75b 2137 chrX 5883810 5883840 chrX 5884051 5884080 pogo 14 240 1.5 1.0 1.2 6.4 270 chrX 5883810 intron CR45668 - chrX 5883945 intron CR45668 - chrX 5884080 intron CR45668 - chrX_14_5880001 chrX_5880001 RAL-301_75b 2138 chrX 5884162 5884192 chrX 5884402 5884433 pogo 10 241 6.0 3.5 4.8 1.7 271 chrX 5884162 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884433 intron CR45668 - chrX_10_5880001 chrX_5880001 RAL-301_75b 2139 chrX 6100496 6100528 chrX 6100619 6100651 7 123 0.5 4.5 2.5 2.0 155 chrX 6100496 intron Nep1 + chrX 6100574 intron Nep1 + chrX 6100651 intron Nep1 + chrX_7_6100001 chrX_6100001 RAL-301_75b 2140 chrX 6115891 6115924 chrX 6116028 6116061 11 137 3.5 2.0 2.8 2.9 170 chrX 6115891 intron Ca-alpha1T - chrX 6115976 intron Ca-alpha1T - chrX 6116061 intron Ca-alpha1T - chrX_11_6115001 chrX_6115001 RAL-301_75b 2141 chrX 6171588 6171609 chrX 6179020 6179041 Quasimodo 9 7432 3.0 6.0 4.5 1.6 7453 chrX 6171588 intron Ca-alpha1T - chrX 6175314 intron Ca-alpha1T - chrX 6179041 intron Ca-alpha1T - chrX_9_6175001 chrX_6175001 RAL-301_75b 2142 chrX 6197538 6197565 chrX 6197618 6197645 10 81 3.5 6.5 5.0 1.7 107 chrX 6197538 exon CG32751 - chrX 6197592 exon CG32751 - chrX 6197645 exon CG32751 - chrX_10_6195001 chrX_6195001 RAL-301_75b 2143 chrX 6312211 6312223 chrX 6312294 6312304 14 82 0.5 4.5 2.5 4.0 93 chrX 6312211 intron CG15894 + chrX 6312258 intron CG15894 + chrX 6312304 intron CG15894 + chrX_14_6310001 chrX_6310001 RAL-301_75b 2144 chrX 6335214 6335231 chrX 6337724 6337741 Tirant 4 2510 0.5 2.0 1.2 1.8 2527 chrX 6335214 intergenic not near genes chrX 6336478 intergenic not near genes chrX 6337741 intergenic CG3842 + chrX_4_6335001 chrX_6335001 RAL-301_75b 2145 chrX 6392872 6392892 chrX 6397637 6397657 Doc 15 4765 3.5 1.0 2.2 4.7 4785 chrX 6392872 intergenic not near genes chrX 6395264 intergenic not near genes chrX 6397657 intergenic not near genes chrX_15_6395001 chrX_6395001 RAL-301_75b 2146 chrX 6538593 6538604 chrX 6538693 6538704 7 100 6.0 4.5 5.2 1.1 111 chrX 6538593 intergenic dx + chrX 6538648 intergenic dx + chrX 6538704 intergenic dx + chrX_7_6535001 chrX_6535001 RAL-301_75b 2147 chrX 6562839 6562841 chrX 6571320 6571323 Tirant 4 8482 5.5 4.0 4.8 0.7 8484 chrX 6562839 intron CG34417 + chrX 6567081 intron CG34417 + chrX 6571323 intron CG34417 + chrX_4_6565001 chrX_6565001 RAL-301_75b 2148 chrX 6605477 6605507 chrX 6608499 6608528 Burdock 9 3021 1.5 1.5 1.5 3.6 3051 chrX 6605477 intron pigs + chrX 6607002 intron pigs + chrX 6608528 intron pigs + chrX_9_6605001 chrX_6605001 RAL-301_75b 2149 chrX 6617272 6617296 chrX 6617816 6617840 7 544 2.5 5.5 4.0 1.4 568 chrX 6617272 intron pigs + chrX 6617556 intron pigs + chrX 6617840 intron pigs + chrX_7_6615001 chrX_6615001 RAL-301_75b 2150 chrX 6897695 6897710 chrX 6897805 6897820 8 110 2.5 1.5 2.0 2.7 125 chrX 6897695 intergenic not near genes chrX 6897758 intergenic not near genes chrX 6897820 intergenic not near genes chrX_8_6895001 chrX_6895001 RAL-301_75b 2151 chrX 6989502 6989534 chrX 6989589 6989621 8 86 1.5 1.5 1.5 3.2 119 chrX 6989502 intron ogre - chrX 6989562 intron ogre - chrX 6989621 intron ogre - chrX_8_6985001 chrX_6985001 RAL-301_75b 2152 chrX 7023600 7023625 chrX 7030989 7031015 Tabor 12 7390 4.5 1.5 3.0 3.0 7415 chrX 7023600 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031015 intron CG12541 - chrX_12_7025001 chrX_7025001 RAL-301_75b 2153 chrX 7125243 7125272 chrX 7134402 7134431 roo 16 9158 0.0 1.5 0.8 8.9 9188 chrX 7125243 intergenic not near genes chrX 7129837 intergenic not near genes chrX 7134431 intergenic not near genes chrX_16_7125001 chrX_7125001 RAL-301_75b 2154 chrX 7294525 7294535 chrX 7294623 7294633 7 97 3.0 3.5 3.2 1.7 108 chrX 7294525 intron,intron CR44357 -,CG1677 - chrX 7294579 intron,intron CR44357 -,CG1677 - chrX 7294633 intron,intron CR44357 -,CG1677 - chrX_7_7290001 chrX_7290001 RAL-301_75b 2155 chrX 6897329 6897355 chrX 7441682 7441746 4 544382 0.5 1.5 1.0 2.0 544417 chrX 6897329 intergenic not near genes chrX 7169538 intron,intron CG9650 +,CR44357 - chrX 7441746 intergenic not near genes chrX_4_7165001 chrX_7165001 RAL-301_75b 2156 chrX 7469248 7469278 chrX 7469638 7469666 4 389 2.0 0.0 1.0 2.0 418 chrX 7469248 intergenic not near genes chrX 7469457 intergenic not near genes chrX 7469666 intergenic not near genes chrX_4_7465001 chrX_7465001 RAL-301_75b 2157 chrX 7570636 7570663 chrX 7570770 7570797 8 134 6.0 2.0 4.0 1.6 161 chrX 7570636 intergenic not near genes chrX 7570716 intergenic not near genes chrX 7570797 intergenic not near genes chrX_8_7570001 chrX_7570001 RAL-301_75b 2158 chrX 7702905 7702929 chrX 7703344 7703368 jockey 14 439 2.0 5.5 3.8 2.9 463 chrX 7702905 intron CHES-1-like - chrX 7703136 intron CHES-1-like - chrX 7703368 intron CHES-1-like - chrX_14_7700001 chrX_7700001 RAL-301_75b 2159 chrX 7705516 7705547 chrX 7705598 7705628 9 81 2.0 2.0 2.0 3.0 112 chrX 7705516 intron CHES-1-like - chrX 7705572 intron CHES-1-like - chrX 7705628 intron CHES-1-like - chrX_9_7705001 chrX_7705001 RAL-301_75b 2160 chrX 7720561 7720583 chrX 7720641 7720665 6 81 4.0 3.0 3.5 1.3 104 chrX 7720561 intergenic not near genes chrX 7720613 intergenic not near genes chrX 7720665 intergenic not near genes chrX_6_7720001 chrX_7720001 RAL-301_75b 2161 chrX 7737130 7737146 chrX 7737242 7737258 4 112 2.0 0.5 1.2 1.8 128 chrX 7737130 5` UTR Tom40 + chrX 7737194 intron Tom40 + chrX 7737258 intron Tom40 + chrX_4_7735001 chrX_7735001 RAL-301_75b 2162 chrX 7784237 7784243 chrX 7784539 7784544 jockey 4 302 4.0 7.0 5.5 0.6 307 chrX 7784237 intergenic not near genes chrX 7784390 intergenic not near genes chrX 7784544 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-301_75b 2163 chrX 7832433 7832460 chrX 7832522 7832549 14 89 0.5 2.5 1.5 5.6 116 chrX 7832433 intron CG1402 + chrX 7832491 intron CG1402 + chrX 7832549 intron CG1402 + chrX_14_7830001 chrX_7830001 RAL-301_75b 2164 chrX 7845724 7845757 chrX 7847215 7847246 hopper2 11 1490 3.0 1.0 2.0 3.7 1522 chrX 7845724 intergenic not near genes chrX 7846485 intergenic not near genes chrX 7847246 intergenic not near genes chrX_11_7845001 chrX_7845001 RAL-301_75b 2165 chrX 7960879 7960905 chrX 7960968 7960994 12 89 4.5 4.0 4.2 2.3 115 chrX 7960879 intron,5` UTR sws -,CR45620 + chrX 7960936 intron sws - chrX 7960994 intron sws - chrX_12_7960001 chrX_7960001 RAL-301_75b 2166 chrX 8092291 8092321 chrX 8092376 8092406 11 85 0.0 1.0 0.5 7.3 115 chrX 8092291 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092406 intron Ubc-E2H - chrX_11_8090001 chrX_8090001 RAL-301_75b 2167 chrX 8288120 8288124 chrX 8288202 8288205 4 82 1.0 0.0 0.5 2.7 85 chrX 8288120 intron nAChRalpha3 - chrX 8288162 intron nAChRalpha3 - chrX 8288205 intron nAChRalpha3 - chrX_4_8285001 chrX_8285001 RAL-301_75b 2168 chrX 8364847 8364879 chrX 8365243 8365276 BS 8 397 1.5 1.0 1.2 3.6 429 chrX 8364847 intron nAChRalpha3 - chrX 8365062 intron nAChRalpha3 - chrX 8365276 intron nAChRalpha3 - chrX_8_8365001 chrX_8365001 RAL-301_75b 2169 chrX 8536758 8536770 chrX 8536834 8536846 5 76 6.0 4.0 5.0 0.8 88 chrX 8536758 intron Nrg + chrX 8536802 intron Nrg + chrX 8536846 intron Nrg + chrX_5_8535001 chrX_8535001 RAL-301_75b 2170 chrX 8809155 8809181 chrX 8809357 8809383 9 202 1.5 0.0 0.8 5.0 228 chrX 8809155 intergenic not near genes chrX 8809269 intergenic not near genes chrX 8809383 intergenic not near genes chrX_9_8805001 chrX_8805001 RAL-301_75b 2171 chrX 8893226 8893238 chrX 8893305 8893318 6 80 5.5 5.5 5.5 0.9 92 chrX 8893226 intron Moe - chrX 8893272 intron Moe - chrX 8893318 intron Moe - chrX_6_8890001 chrX_8890001 RAL-301_75b 2172 chrX 8948758 8948785 chrX 8956268 8956295 roo 14 7510 4.0 3.5 3.8 2.9 7537 chrX 8948758 intron rdgA + chrX 8952526 intron rdgA + chrX 8956295 intron rdgA + chrX_14_8950001 chrX_8950001 RAL-301_75b 2173 chrX 9229928 9229936 chrX 9230008 9230014 4 79 1.5 12.0 6.8 0.5 86 chrX 9229928 intron CG12121 - chrX 9229971 intron CG12121 - chrX 9230014 intron CG12121 - chrX_4_9225001 chrX_9225001 RAL-301_75b 2174 chrX 9337941 9337969 chrX 9338032 9338060 4 91 2.5 3.5 3.0 1.0 119 chrX 9337941 intron CG34449 - chrX 9338000 intron CG34449 - chrX 9338060 exon CG34449 - chrX_4_9335001 chrX_9335001 RAL-301_75b 2175 chrX 9508133 9508154 chrX 9509651 9509671 jockey 12 1518 11.5 2.5 7.0 1.5 1538 chrX 9508133 intron CG32700 - chrX 9508902 intron CG32700 - chrX 9509671 intron CG32700 - chrX_12_9505001 chrX_9505001 RAL-301_75b 2176 chrX 9537109 9537139 chrX 9537365 9537396 7 257 1.5 4.5 3.0 1.8 287 chrX 9537109 intron CG32700 - chrX 9537252 intron CG32700 - chrX 9537396 intron CG32700 - chrX_7_9535001 chrX_9535001 RAL-301_75b 2177 chrX 9575800 9575820 chrX 9576121 9576144 mdg3 7 323 1.5 7.0 4.2 1.3 344 chrX 9575800 intron,exon CG32699 -,CG42395 - chrX 9575972 intron,intron CG32699 -,CG42395 - chrX 9576144 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 RAL-301_75b 2178 chrX 9668727 9668742 chrX 9668803 9668820 4 78 6.0 4.0 5.0 0.7 93 chrX 9668727 3` UTR nej - chrX 9668774 3` UTR nej - chrX 9668820 3` UTR nej - chrX_4_9665001 chrX_9665001 RAL-301_75b 2179 chrX 9758049 9758071 chrX 9758133 9758155 5 84 3.5 0.0 1.8 1.8 106 chrX 9758049 intergenic not near genes chrX 9758102 intergenic not near genes chrX 9758155 intergenic not near genes chrX_5_9755001 chrX_9755001 RAL-301_75b 2180 chrX 9854467 9854485 chrX 9854548 9854566 4 80 4.0 1.0 2.5 1.1 99 chrX 9854467 intergenic not near genes chrX 9854516 intergenic not near genes chrX 9854566 intergenic not near genes chrX_4_9850001 chrX_9850001 RAL-301_75b 2181 chrX 9923392 9923412 chrX 9923483 9923503 9 91 1.0 2.5 1.8 3.2 111 chrX 9923392 intergenic not near genes chrX 9923448 intergenic not near genes chrX 9923503 intergenic not near genes chrX_9_9920001 chrX_9920001 RAL-301_75b 2182 chrX 10138218 10138247 chrX 10145722 10145751 412 13 7504 1.5 4.0 2.8 3.4 7533 chrX 10138218 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145751 intron,intron RhoU +,CR44894 - chrX_13_10140001 chrX_10140001 RAL-301_75b 2183 chrX 10154286 10154309 chrX 10154362 10154385 12 76 1.0 3.5 2.2 3.8 99 chrX 10154286 intron,intron CR44894 -,CG12645 + chrX 10154336 intron,intron CR44894 -,CG12645 + chrX 10154385 intron,exon CR44894 -,CG12645 + chrX_12_10150001 chrX_10150001 RAL-301_75b 2184 chrX 10317566 10317571 chrX 10317643 10317649 6 78 1.0 3.5 2.2 1.9 83 chrX 10317566 intron alpha-Man-I - chrX 10317608 intron alpha-Man-I - chrX 10317649 intron alpha-Man-I - chrX_6_10315001 chrX_10315001 RAL-301_75b 2185 chrX 10348803 10348828 chrX 10356368 10356392 springer 4 7564 2.0 7.5 4.8 0.7 7589 chrX 10348803 intergenic snoRNA:U3:9B + chrX 10352598 intergenic not near genes chrX 10356392 intergenic l(1)G0289 - chrX_4_10350001 chrX_10350001 RAL-301_75b 2186 chrX 10550853 10550879 chrX 10552320 10552343 hobo 8 1466 2.5 4.5 3.5 1.8 1490 chrX 10550853 intron spri - chrX 10551598 intron spri - chrX 10552343 intron spri - chrX_8_10550001 chrX_10550001 RAL-301_75b 2187 chrX 10630619 10630634 chrX 10630738 10630753 9 119 3.5 2.5 3.0 2.2 134 chrX 10630619 intron X11Lbeta + chrX 10630686 intron X11Lbeta + chrX 10630753 intron X11Lbeta + chrX_9_10630001 chrX_10630001 RAL-301_75b 2188 chrX 10686048 10686083 chrX 10691185 10691220 roo 10 5137 2.5 2.5 2.5 2.9 5172 chrX 10686048 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691220 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-301_75b 2189 chrX 10803036 10803045 chrX 10803119 10803130 4 84 2.0 6.0 4.0 0.8 94 chrX 10803036 intron Imp - chrX 10803083 intron Imp - chrX 10803130 intron Imp - chrX_4_10800001 chrX_10800001 RAL-301_75b 2190 chrX 11034291 11034316 chrX 11034621 11034646 12 330 4.0 4.5 4.2 2.3 355 chrX 11034291 intron CG42339 - chrX 11034468 intron CG42339 - chrX 11034646 intron CG42339 - chrX_12_11030001 chrX_11030001 RAL-301_75b 2191 chrX 11095999 11096027 chrX 11103101 11103129 HMS-Beagle 6 7102 2.5 1.0 1.8 2.1 7130 chrX 11095999 intergenic not near genes chrX 11099564 intergenic not near genes chrX 11103129 intron CG42249 + chrX_6_11095001 chrX_11095001 RAL-301_75b 2192 chrX 11167768 11167804 chrX 11167865 11167901 5 97 2.0 1.0 1.5 2.0 133 chrX 11167768 intergenic antdh - chrX 11167834 intergenic antdh - chrX 11167901 intergenic antdh - chrX_5_11165001 chrX_11165001 RAL-301_75b 2193 chrX 11184251 11184270 chrX 11189326 11189346 flea 8 5076 1.0 3.0 2.0 2.7 5095 chrX 11184251 intergenic not near genes chrX 11186798 intergenic not near genes chrX 11189346 intergenic not near genes chrX_8_11185001 chrX_11185001 RAL-301_75b 2194 chrX 11191893 11191916 chrX 11191971 11191993 5 77 1.5 0.5 1.0 2.5 100 chrX 11191893 intergenic not near genes chrX 11191943 intergenic not near genes chrX 11191993 intergenic not near genes chrX_5_11190001 chrX_11190001 RAL-301_75b 2195 chrX 11214736 11214751 chrX 11214818 11214833 8 82 6.0 3.0 4.5 1.5 97 chrX 11214736 intergenic not near genes chrX 11214784 intergenic not near genes chrX 11214833 intergenic not near genes chrX_8_11210001 chrX_11210001 RAL-301_75b 2196 chrX 11312062 11312094 chrX 11319414 11319447 Stalker2 12 7352 0.5 1.0 0.8 6.7 7385 chrX 11312062 intergenic not near genes chrX 11315754 intergenic not near genes chrX 11319447 intergenic not near genes chrX_12_11315001 chrX_11315001 RAL-301_75b 2197 chrX 11633424 11633446 chrX 11640478 11640500 297 7 7054 2.5 6.5 4.5 1.3 7076 chrX 11633424 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640500 intron Ptp10D + chrX_7_11635001 chrX_11635001 RAL-301_75b 2198 chrX 11719889 11719894 chrX 11719969 11719974 4 80 3.0 8.0 5.5 0.6 85 chrX 11719889 3` UTR prtp + chrX 11719932 intergenic prtp +,Tango10 + chrX 11719974 intergenic prtp +,Tango10 + chrX_4_11715001 chrX_11715001 RAL-301_75b 2199 chrX 12038087 12038110 chrX 12038281 12038304 7 194 3.0 4.0 3.5 1.6 217 chrX 12038087 intergenic not near genes chrX 12038196 intergenic not near genes chrX 12038304 intergenic not near genes chrX_7_12035001 chrX_12035001 RAL-301_75b 2200 chrX 12168140 12168159 chrX 12173582 12173601 I-element 7 5442 2.0 5.0 3.5 1.6 5461 chrX 12168140 intron Ten-a + chrX 12170870 intron Ten-a + chrX 12173601 intron Ten-a + chrX_7_12170001 chrX_12170001 RAL-301_75b 2201 chrX 12191568 12191572 chrX 12191656 12191657 6 87 6.0 3.0 4.5 1.1 89 chrX 12191568 intron Ten-a + chrX 12191612 intron Ten-a + chrX 12191657 intron Ten-a + chrX_6_12190001 chrX_12190001 RAL-301_75b 2202 chrX 12272853 12272869 chrX 12272932 12272946 7 79 3.0 3.0 3.0 1.8 93 chrX 12272853 intron Ten-a + chrX 12272900 intron Ten-a + chrX 12272946 intron Ten-a + chrX_7_12270001 chrX_12270001 RAL-301_75b 2203 chrX 12350772 12350798 chrX 12350852 12350879 15 81 4.0 0.0 2.0 5.0 107 chrX 12350772 intergenic not near genes chrX 12350826 intergenic not near genes chrX 12350879 intergenic not near genes chrX_15_12350001 chrX_12350001 RAL-301_75b 2204 chrX 12442083 12442116 chrX 12442164 12442198 9 82 1.0 0.0 0.5 6.0 115 chrX 12442083 intron Pkcdelta + chrX 12442140 intron Pkcdelta + chrX 12442198 intron Pkcdelta + chrX_9_12440001 chrX_12440001 RAL-301_75b 2205 chrX 12506792 12506809 chrX 12506926 12506943 5 134 5.0 0.0 2.5 1.4 151 chrX 12506792 intron CG2556 + chrX 12506868 intron CG2556 + chrX 12506943 intron CG2556 + chrX_5_12505001 chrX_12505001 RAL-301_75b 2206 chrX 12511326 12511350 chrX 12511410 12511434 4 84 0.0 2.0 1.0 2.0 108 chrX 12511326 intron CG2556 + chrX 12511380 intron CG2556 + chrX 12511434 intron CG2556 + chrX_4_12510001 chrX_12510001 RAL-301_75b 2207 chrX 12864968 12864990 chrX 12865048 12865069 5 80 0.5 2.5 1.5 2.0 101 chrX 12864968 intron Pde9 - chrX 12865018 intron Pde9 - chrX 12865069 intron Pde9 - chrX_5_12865001 chrX_12865001 RAL-301_75b 2208 chrX 12953893 12953925 chrX 12954031 12954063 7 138 0.0 0.5 0.2 5.8 170 chrX 12953893 intron hec - chrX 12953978 intron hec - chrX 12954063 intron hec - chrX_7_12950001 chrX_12950001 RAL-301_75b 2209 chrX 13011707 13011726 chrX 13011805 13011825 7 98 4.0 0.0 2.0 2.3 118 chrX 13011707 intron rad + chrX 13011766 intron rad + chrX 13011825 intron rad + chrX_7_13010001 chrX_13010001 RAL-301_75b 2210 chrX 13146597 13146629 chrX 13146685 13146717 8 88 1.5 2.0 1.8 2.9 120 chrX 13146597 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146717 intron CG32645 + chrX_8_13145001 chrX_13145001 RAL-301_75b 2211 chrX 13236883 13236902 chrX 13236968 13236987 9 85 0.0 0.5 0.2 7.5 104 chrX 13236883 intron mew - chrX 13236935 intron mew - chrX 13236987 intron mew - chrX_9_13235001 chrX_13235001 RAL-301_75b 2212 chrX 13374846 13374863 chrX 13374926 13374942 9 80 2.0 5.5 3.8 1.9 96 chrX 13374846 intron CG1640 + chrX 13374894 intron CG1640 + chrX 13374942 intron CG1640 + chrX_9_13370001 chrX_13370001 RAL-301_75b 2213 chrX 13429464 13429492 chrX 13430613 13430641 jockey 8 1149 1.5 5.5 3.5 1.8 1177 chrX 13429464 intergenic not near genes chrX 13430052 intergenic not near genes chrX 13430641 intergenic not near genes chrX_8_13430001 chrX_13430001 RAL-301_75b 2214 chrX 13443412 13443415 chrX 13443489 13443491 7 77 2.0 3.0 2.5 2.0 79 chrX 13443412 intergenic not near genes chrX 13443452 intergenic not near genes chrX 13443491 intergenic not near genes chrX_7_13440001 chrX_13440001 RAL-301_75b 2215 chrX 13463652 13463677 chrX 13469226 13469254 mdg3 10 5576 2.0 3.5 2.8 2.6 5602 chrX 13463652 intron Neto + chrX 13466453 intron Neto + chrX 13469254 intron Neto + chrX_10_13465001 chrX_13465001 RAL-301_75b 2216 chrX 13628461 13628470 chrX 13628545 13628554 7 84 0.5 3.0 1.8 2.5 93 chrX 13628461 intron NFAT + chrX 13628508 intron NFAT + chrX 13628554 intron NFAT + chrX_7_13625001 chrX_13625001 RAL-301_75b 2217 chrX 13754426 13754440 chrX 13754522 13754534 6 96 1.0 6.0 3.5 1.3 108 chrX 13754426 intron Pdcd4 - chrX 13754480 intron Pdcd4 - chrX 13754534 intron Pdcd4 - chrX_6_13750001 chrX_13750001 RAL-301_75b 2218 chrX 13943273 13943300 chrX 13943364 13943391 4 91 0.0 3.5 1.8 1.4 118 chrX 13943273 intron mamo - chrX 13943332 intron mamo - chrX 13943391 intron mamo - chrX_4_13940001 chrX_13940001 RAL-301_75b 2219 chrX 13975878 13975906 chrX 13975955 13975983 4 77 0.0 2.0 1.0 2.0 105 chrX 13975878 intron mamo - chrX 13975930 intron mamo - chrX 13975983 intron mamo - chrX_4_13975001 chrX_13975001 RAL-301_75b 2220 chrX 14064148 14064169 chrX 14064244 14064266 7 97 0.0 0.0 0.0 7.0 118 chrX 14064148 intergenic not near genes chrX 14064207 intergenic not near genes chrX 14064266 intergenic not near genes chrX_7_14060001 chrX_14060001 RAL-301_75b 2221 chrX 14105020 14105046 chrX 14114171 14114197 roo 7 9151 3.5 4.5 4.0 1.4 9177 chrX 14105020 intergenic not near genes chrX 14109608 intergenic not near genes chrX 14114197 5` UTR CR44657 + chrX_7_14105001 chrX_14105001 RAL-301_75b 2222 chrX 14157591 14157612 chrX 14163248 14163268 297 8 5657 2.0 3.5 2.8 2.1 5677 chrX 14157591 intergenic not near genes chrX 14160430 intergenic not near genes chrX 14163268 intergenic not near genes chrX_8_14160001 chrX_14160001 RAL-301_75b 2223 chrX 14331753 14331772 chrX 14331838 14331857 4 85 0.0 0.5 0.2 3.3 104 chrX 14331753 intron dpr8 + chrX 14331805 intron dpr8 + chrX 14331857 intron dpr8 + chrX_4_14330001 chrX_14330001 RAL-301_75b 2224 chrX 14340273 14340289 chrX 14340374 14340390 5 101 3.0 1.0 2.0 1.7 117 chrX 14340273 intron dpr8 + chrX 14340332 intron dpr8 + chrX 14340390 intron dpr8 + chrX_5_14340001 chrX_14340001 RAL-301_75b 2225 chrX 14447678 14447692 chrX 14447758 14447772 8 80 0.0 1.5 0.8 4.4 94 chrX 14447678 intron dpr8 + chrX 14447725 intron dpr8 + chrX 14447772 intron dpr8 + chrX_8_14445001 chrX_14445001 RAL-301_75b 2226 chrX 14528692 14528714 chrX 14528785 14528807 6 92 4.0 2.5 3.2 1.4 115 chrX 14528692 intergenic not near genes chrX 14528750 intergenic not near genes chrX 14528807 intergenic not near genes chrX_6_14525001 chrX_14525001 RAL-301_75b 2227 chrX 14677339 14677358 chrX 14677424 14677442 12 84 1.5 4.0 2.8 3.2 103 chrX 14677339 intergenic not near genes chrX 14677390 intergenic not near genes chrX 14677442 intergenic not near genes chrX_12_14675001 chrX_14675001 RAL-301_75b 2228 chrX 14714044 14714064 chrX 14714126 14714146 9 82 1.0 5.0 3.0 2.2 102 chrX 14714044 intron NetB - chrX 14714095 intron NetB - chrX 14714146 intron NetB - chrX_9_14710001 chrX_14710001 RAL-301_75b 2229 chrX 14778028 14778035 chrX 14782825 14782832 Doc 6 4796 8.0 1.5 4.8 1.0 4804 chrX 14778028 intergenic CG5347 + chrX 14780430 intergenic not near genes chrX 14782832 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-301_75b 2230 chrX 14813738 14813767 chrX 14813816 14813845 14 77 1.5 2.5 2.0 4.7 107 chrX 14813738 intron rut - chrX 14813792 intron rut - chrX 14813845 intron rut - chrX_14_14810001 chrX_14810001 RAL-301_75b 2231 chrX 14818771 14818798 chrX 14823975 14824002 copia 4 5204 1.5 4.0 2.8 1.1 5231 chrX 14818771 intron rut - chrX 14821386 intron rut - chrX 14824002 intron rut - chrX_4_14820001 chrX_14820001 RAL-301_75b 2232 chrX 14936864 14936885 chrX 14946121 14946142 roo 7 9257 8.0 6.0 7.0 0.9 9278 chrX 14936864 intron pdgy - chrX 14941503 intron pdgy - chrX 14946142 intron pdgy - chrX_7_14940001 chrX_14940001 RAL-301_75b 2233 chrX 15081608 15081628 chrX 15081740 15081763 4 134 8.5 7.5 8.0 0.4 155 chrX 15081608 exon CG33177 + chrX 15081686 exon CG33177 + chrX 15081763 exon CG33177 + chrX_4_15080001 chrX_15080001 RAL-301_75b 2234 chrX 15149528 15149544 chrX 15149606 15149621 8 78 4.0 1.5 2.8 2.1 93 chrX 15149528 intron CG9095 - chrX 15149574 intron CG9095 - chrX 15149621 intron CG9095 - chrX_8_15145001 chrX_15145001 RAL-301_75b 2235 chrX 15248268 15248294 chrX 15248342 15248370 4 76 2.0 1.5 1.8 1.4 102 chrX 15248268 intergenic not near genes chrX 15248319 intergenic not near genes chrX 15248370 intergenic not near genes chrX_4_15245001 chrX_15245001 RAL-301_75b 2236 chrX 15277078 15277088 chrX 15277341 15277351 4 263 1.5 4.0 2.8 1.1 273 chrX 15277078 intergenic not near genes chrX 15277214 intergenic not near genes chrX 15277351 intergenic not near genes chrX_4_15275001 chrX_15275001 RAL-301_75b 2237 chrX 15369846 15369863 chrX 15369929 15369946 4 83 2.5 6.5 4.5 0.7 100 chrX 15369846 intron acj6 - chrX 15369896 intron acj6 - chrX 15369946 intron acj6 - chrX_4_15365001 chrX_15365001 RAL-301_75b 2238 chrX 15413048 15413087 chrX 15417350 15417389 Juan 16 4302 3.0 5.0 4.0 3.2 4341 chrX 15413048 intron Cngl - chrX 15415218 intron Cngl - chrX 15417389 intron Cngl - chrX_16_15415001 chrX_15415001 RAL-301_75b 2239 chrX 15426185 15426199 chrX 15426280 15426295 5 96 1.5 2.5 2.0 1.7 110 chrX 15426185 intron Cngl - chrX 15426240 intron Cngl - chrX 15426295 intron Cngl - chrX_5_15425001 chrX_15425001 RAL-301_75b 2240 chrX 15429233 15429264 chrX 15429315 15429345 8 82 4.0 3.5 3.8 1.7 112 chrX 15429233 intron Cngl - chrX 15429289 intron Cngl - chrX 15429345 intron Cngl - chrX_8_15425001 chrX_15425001 RAL-301_75b 2241 chrX 15634178 15634179 chrX 15634601 15634603 5 424 1.5 1.0 1.2 2.3 425 chrX 15634178 intergenic not near genes chrX 15634390 intergenic not near genes chrX 15634603 intergenic not near genes chrX_5_15630001 chrX_15630001 RAL-301_75b 2242 chrX 15653690 15653709 chrX 15653791 15653811 5 102 1.5 0.0 0.8 2.8 121 chrX 15653690 intergenic not near genes chrX 15653750 intergenic not near genes chrX 15653811 intergenic not near genes chrX_5_15650001 chrX_15650001 RAL-301_75b 2243 chrX 15678047 15678068 chrX 15678124 15678144 8 76 0.5 2.0 1.2 3.6 97 chrX 15678047 intergenic CG12708 + chrX 15678096 intergenic CG12708 + chrX 15678144 intergenic CG12708 + chrX_8_15675001 chrX_15675001 RAL-301_75b 2244 chrX 15721377 15721400 chrX 15721467 15721490 4 90 1.0 4.5 2.8 1.1 113 chrX 15721377 exon CG8184 + chrX 15721434 intron CG8184 + chrX 15721490 intron CG8184 + chrX_4_15720001 chrX_15720001 RAL-301_75b 2245 chrX 15759504 15759529 chrX 15759580 15759605 7 76 3.0 3.0 3.0 1.8 101 chrX 15759504 intron Graf - chrX 15759554 intron Graf - chrX 15759605 intron Graf - chrX_7_15755001 chrX_15755001 RAL-301_75b 2246 chrX 16059670 16059680 chrX 16059747 16059757 7 77 5.0 4.0 4.5 1.3 87 chrX 16059670 exon Muc14A + chrX 16059714 exon Muc14A + chrX 16059757 exon Muc14A + chrX_7_16055001 chrX_16055001 RAL-301_75b 2247 chrX 16154896 16154933 chrX 16154980 16155014 11 83 2.5 0.5 1.5 4.4 118 chrX 16154896 intergenic not near genes chrX 16154955 intergenic not near genes chrX 16155014 intergenic not near genes chrX_11_16150001 chrX_16150001 RAL-301_75b 2248 chrX 16162171 16162194 chrX 16162350 16162373 4 179 1.0 3.0 2.0 1.3 202 chrX 16162171 intergenic not near genes chrX 16162272 intergenic not near genes chrX 16162373 intergenic not near genes chrX_4_16160001 chrX_16160001 RAL-301_75b 2249 chrX 16218587 16218611 chrX 16218903 16218928 9 317 3.5 2.5 3.0 2.2 341 chrX 16218587 intergenic not near genes chrX 16218758 intergenic not near genes chrX 16218928 intergenic not near genes chrX_9_16215001 chrX_16215001 RAL-301_75b 2250 chrX 16222775 16222809 chrX 16231125 16231159 roo 9 8350 6.0 3.0 4.5 1.6 8384 chrX 16222775 intergenic not near genes chrX 16226967 intergenic not near genes chrX 16231159 intergenic not near genes chrX_9_16225001 chrX_16225001 RAL-301_75b 2251 chrX 16245955 16245960 chrX 16246062 16246067 INE-1 4 106 2.5 3.0 2.8 1.1 112 chrX 16245955 intergenic not near genes chrX 16246011 intergenic not near genes chrX 16246067 intergenic not near genes chrX_4_16245001 chrX_16245001 RAL-301_75b 2252 chrX 16295540 16295548 chrX 16295624 16295632 4 84 2.0 0.0 1.0 2.0 92 chrX 16295540 intron CG9911 - chrX 16295586 intron CG9911 - chrX 16295632 intron CG9911 - chrX_4_16295001 chrX_16295001 RAL-301_75b 2253 chrX 16340694 16340701 chrX 16349851 16349858 roo 4 9156 0.0 9.5 4.8 0.7 9164 chrX 16340694 intergenic Dsp1 + chrX 16345276 intergenic not near genes chrX 16349858 intergenic sl + chrX_4_16345001 chrX_16345001 RAL-301_75b 2254 chrX 16492644 16492677 chrX 16498221 16498253 mdg3 7 5576 2.5 0.0 1.2 3.2 5609 chrX 16492644 intron para - chrX 16495448 intron para - chrX 16498253 intron para - chrX_7_16495001 chrX_16495001 RAL-301_75b 2255 chrX 16529433 16529437 chrX 16529544 16529548 4 111 0.0 7.0 3.5 0.9 115 chrX 16529433 intron para - chrX 16529490 intron para - chrX 16529548 intron para - chrX_4_16525001 chrX_16525001 RAL-301_75b 2256 chrX 16821235 16821260 chrX 16821315 16821340 8 80 5.0 0.5 2.8 2.1 105 chrX 16821235 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821340 intron CG4829 + chrX_8_16820001 chrX_16820001 RAL-301_75b 2257 chrX 16833208 16833223 chrX 16833292 16833308 12 85 4.5 0.0 2.2 3.8 100 chrX 16833208 intron CG13004 - chrX 16833258 intron CG13004 - chrX 16833308 intron CG13004 - chrX_12_16830001 chrX_16830001 RAL-301_75b 2258 chrX 16870088 16870089 chrX 16870169 16870172 4 82 1.0 3.0 2.0 1.3 84 chrX 16870088 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870172 intron CG13003 - chrX_4_16870001 chrX_16870001 RAL-301_75b 2259 chrX 16874041 16874056 chrX 16874117 16874132 4 76 2.0 0.0 1.0 2.0 91 chrX 16874041 intron CG13003 - chrX 16874086 intron CG13003 - chrX 16874132 intron CG13003 - chrX_4_16870001 chrX_16870001 RAL-301_75b 2260 chrX 17088195 17088199 chrX 17088787 17088792 5 593 0.0 4.0 2.0 1.7 597 chrX 17088195 intergenic not near genes chrX 17088494 intergenic not near genes chrX 17088792 intergenic not near genes chrX_5_17085001 chrX_17085001 RAL-301_75b 2261 chrX 17195206 17195224 chrX 17200292 17200310 flea 7 5086 4.5 1.0 2.8 1.8 5104 chrX 17195206 3` UTR baz + chrX 17197758 3` UTR baz + chrX 17200310 3` UTR baz + chrX_7_17195001 chrX_17195001 RAL-301_75b 2262 chrX 17282875 17282905 chrX 17282953 17282983 7 77 2.0 0.0 1.0 3.5 108 chrX 17282875 intron CG5445 + chrX 17282929 5` UTR CG5445 + chrX 17282983 intron CG5445 + chrX_7_17280001 chrX_17280001 RAL-301_75b 2263 chrX 17290074 17290092 chrX 17290150 17290167 6 76 1.5 2.0 1.8 2.1 93 chrX 17290074 intron,intron CG5445 +,Fim - chrX 17290120 intron,intron CG5445 +,Fim - chrX 17290167 intron,intron CG5445 +,Fim - chrX_6_17290001 chrX_17290001 RAL-301_75b 2264 chrX 17536856 17536882 chrX 17536939 17536965 8 82 2.5 3.5 3.0 2.0 109 chrX 17536856 intron CG43658 - chrX 17536910 intron CG43658 - chrX 17536965 intron CG43658 - chrX_8_17535001 chrX_17535001 RAL-301_75b 2265 chrX 17546992 17547002 chrX 17547124 17547135 4 133 0.5 3.5 2.0 1.3 143 chrX 17546992 intron CG43658 - chrX 17547064 intron CG43658 - chrX 17547135 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-301_75b 2266 chrX 17574554 17574576 chrX 17574767 17574790 8 214 2.5 4.0 3.2 1.9 236 chrX 17574554 intron l(1)G0222 - chrX 17574672 intron l(1)G0222 - chrX 17574790 intron l(1)G0222 - chrX_8_17570001 chrX_17570001 RAL-301_75b 2267 chrX 17740385 17740403 chrX 17740461 17740480 4 76 1.0 5.0 3.0 1.0 95 chrX 17740385 intron CG42684 + chrX 17740432 intron CG42684 + chrX 17740480 intron CG42684 + chrX_4_17740001 chrX_17740001 RAL-301_75b 2268 chrX 17782222 17782228 chrX 17782320 17782326 4 97 2.5 1.0 1.8 1.4 104 chrX 17782222 intergenic not near genes chrX 17782274 intergenic not near genes chrX 17782326 intergenic not near genes chrX_4_17780001 chrX_17780001 RAL-301_75b 2269 chrX 17782566 17782587 chrX 17782654 17782676 5 88 2.0 1.0 1.5 2.0 110 chrX 17782566 intergenic not near genes chrX 17782621 intergenic not near genes chrX 17782676 intergenic not near genes chrX_5_17780001 chrX_17780001 RAL-301_75b 2270 chrX 17968899 17968929 chrX 17969017 17969047 8 118 2.0 2.0 2.0 2.7 148 chrX 17968899 intron Sh - chrX 17968973 intron Sh - chrX 17969047 intron Sh - chrX_8_17965001 chrX_17965001 RAL-301_75b 2271 chrX 18122823 18122848 chrX 18122899 18122924 7 76 2.5 2.0 2.2 2.2 101 chrX 18122823 5` UTR CR45606 + chrX 18122874 5` UTR CR45606 + chrX 18122924 intergenic CR45606 + chrX_7_18120001 chrX_18120001 RAL-301_75b 2272 chrX 18128213 18128239 chrX 18131048 18131072 6 2834 20.5 14.5 17.5 0.3 2859 chrX 18128213 intergenic mir-210 + chrX 18129642 3` UTR CG43133 - chrX 18131072 3` UTR ari-1 - chrX_6_18125001 chrX_18125001 RAL-301_75b 2273 chrX 18337422 18337453 chrX 18337520 18337553 9 100 1.5 1.5 1.5 3.6 131 chrX 18337422 intron CG6123 - chrX 18337488 intron CG6123 - chrX 18337553 intron CG6123 - chrX_9_18335001 chrX_18335001 RAL-301_75b 2274 chrX 18427391 18427409 chrX 18427802 18427820 11 411 3.0 3.0 3.0 2.8 429 chrX 18427391 intergenic CG42323 + chrX 18427606 intergenic not near genes chrX 18427820 intergenic not near genes chrX_11_18425001 chrX_18425001 RAL-301_75b 2275 chrX 18429507 18429526 chrX 18434818 18434837 Transpac 4 5311 4.0 4.5 4.2 0.8 5330 chrX 18429507 intergenic not near genes chrX 18432172 intergenic not near genes chrX 18434837 intergenic not near genes chrX_4_18430001 chrX_18430001 RAL-301_75b 2276 chrX 18486109 18486143 chrX 18486196 18486232 9 89 2.0 3.5 2.8 2.4 123 chrX 18486109 exon psh - chrX 18486170 intron psh - chrX 18486232 intron psh - chrX_9_18485001 chrX_18485001 RAL-301_75b 2277 chrX 18645019 18645045 chrX 18645117 18645143 11 98 6.0 2.5 4.2 2.1 124 chrX 18645019 intron Rip11 - chrX 18645081 intron Rip11 - chrX 18645143 intron Rip11 - chrX_11_18645001 chrX_18645001 RAL-301_75b 2278 chrX 18774449 18774469 chrX 18774534 18774554 10 85 2.0 0.0 1.0 5.0 105 chrX 18774449 intergenic CCKLR-17D3 - chrX 18774502 intergenic CCKLR-17D3 - chrX 18774554 intergenic not near genes chrX_10_18770001 chrX_18770001 RAL-301_75b 2279 chrX 18881853 18881875 chrX 18881940 18881962 9 87 0.0 0.5 0.2 7.5 109 chrX 18881853 3` UTR CG34401 + chrX 18881908 3` UTR CG34401 + chrX 18881962 3` UTR CG34401 + chrX_9_18880001 chrX_18880001 RAL-301_75b 2280 chrX 18896519 18896546 chrX 18896630 18896657 6 111 2.5 2.5 2.5 1.7 138 chrX 18896519 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896657 intergenic CG7349 + chrX_6_18895001 chrX_18895001 RAL-301_75b 2281 chrX 18896908 18896942 chrX 18896985 18897019 12 77 2.0 1.5 1.8 4.3 111 chrX 18896908 intergenic CG7349 + chrX 18896964 intergenic CG7349 + chrX 18897019 intergenic CG7349 + chrX_12_18895001 chrX_18895001 RAL-301_75b 2282 chrX 19056069 19056080 chrX 19056172 19056183 7 103 3.5 2.5 3.0 1.8 114 chrX 19056069 intergenic not near genes chrX 19056126 intergenic not near genes chrX 19056183 intergenic not near genes chrX_7_19055001 chrX_19055001 RAL-301_75b 2283 chrX 19080324 19080358 chrX 19080429 19080459 12 105 1.5 2.0 1.8 4.3 135 chrX 19080324 intergenic not near genes chrX 19080392 intergenic not near genes chrX 19080459 intergenic not near genes chrX_12_19080001 chrX_19080001 RAL-301_75b 2284 chrX 19136556 19136577 chrX 19143475 19143493 412 10 6919 2.0 3.0 2.5 2.9 6937 chrX 19136556 intergenic not near genes chrX 19140024 intergenic not near genes chrX 19143493 3` UTR RhoGAP18B - chrX_10_19140001 chrX_19140001 RAL-301_75b 2285 chrX 13057298 13057300 chrX 19242812 19242814 25 6185514 10.5 18.5 14.5 1.6 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_25_16150001 chrX_16150001 RAL-301_75b 2286 chrX 19380158 19380187 chrX 19380397 19380427 pogo 8 240 3.5 0.5 2.0 2.7 269 chrX 19380158 intron kek5 + chrX 19380292 intron kek5 + chrX 19380427 intron kek5 + chrX_8_19380001 chrX_19380001 RAL-301_75b 2287 chrX 19460014 19460030 chrX 19460102 19460118 6 88 0.0 4.5 2.2 1.9 104 chrX 19460014 intron kek5 + chrX 19460066 intron kek5 + chrX 19460118 intron kek5 + chrX_6_19460001 chrX_19460001 RAL-301_75b 2288 chrX 19472127 19472155 chrX 19472693 19472725 jockey 4 569 1.5 4.0 2.8 1.1 598 chrX 19472127 intergenic kek5 + chrX 19472426 intergenic not near genes chrX 19472725 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-301_75b 2289 chrX 19541442 19541448 chrX 19541522 19541524 4 78 1.5 4.5 3.0 1.0 82 chrX 19541442 intron CG32532 - chrX 19541483 intron CG32532 - chrX 19541524 intron CG32532 - chrX_4_19540001 chrX_19540001 RAL-301_75b 2290 chrX 19662033 19662053 chrX 19662256 19662276 6 223 2.0 3.5 2.8 1.6 243 chrX 19662033 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662276 intron CG14223 - chrX_6_19660001 chrX_19660001 RAL-301_75b 2291 chrX 19710075 19710103 chrX 19711861 19711889 S-element 12 1786 1.0 4.0 2.5 3.4 1814 chrX 19710075 intron meso18E - chrX 19710982 intron meso18E - chrX 19711889 intron meso18E - chrX_12_19710001 chrX_19710001 RAL-301_75b 2292 chrX 19756140 19756147 chrX 19756225 19756234 11 86 1.5 0.5 1.0 5.5 94 chrX 19756140 intron Pmp70 + chrX 19756187 intron Pmp70 + chrX 19756234 intron Pmp70 + chrX_11_19755001 chrX_19755001 RAL-301_75b 2293 chrX 19762583 19762621 chrX 19762663 19762701 12 80 0.5 3.0 1.8 4.3 118 chrX 19762583 5` UTR CG12702 - chrX 19762642 5` UTR CG12702 - chrX 19762701 5` UTR CG12702 - chrX_12_19760001 chrX_19760001 RAL-301_75b 2294 chrX 19881455 19881482 chrX 19881534 19881562 9 80 2.5 3.0 2.8 2.4 107 chrX 19881455 intron Hers + chrX 19881508 intron Hers + chrX 19881562 intron Hers + chrX_9_19880001 chrX_19880001 RAL-301_75b 2295 chrX 19992420 19992424 chrX 19992496 19992500 4 76 4.5 4.0 4.2 0.8 80 chrX 19992420 intergenic not near genes chrX 19992460 intergenic not near genes chrX 19992500 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-301_75b 2296 chrX 20041530 20041560 chrX 20041610 20041640 7 80 2.5 3.0 2.8 1.8 110 chrX 20041530 intron Dop2R - chrX 20041585 intron Dop2R - chrX 20041640 intron Dop2R - chrX_7_20040001 chrX_20040001 RAL-301_75b 2297 chrX 20049833 20049851 chrX 20049925 20049946 5 94 4.5 3.5 4.0 1.0 113 chrX 20049833 intron Dop2R - chrX 20049890 intron Dop2R - chrX 20049946 intron Dop2R - chrX_5_20045001 chrX_20045001 RAL-301_75b 2298 chrX 20082754 20082781 chrX 20082837 20082864 9 83 1.5 5.5 3.5 2.0 110 chrX 20082754 intergenic not near genes chrX 20082809 intergenic not near genes chrX 20082864 intergenic not near genes chrX_9_20080001 chrX_20080001 RAL-301_75b 2299 chrX 20105200 20105223 chrX 20105303 20105326 8 104 16.0 23.5 19.8 0.4 126 chrX 20105200 intergenic not near genes chrX 20105263 intergenic not near genes chrX 20105326 intergenic not near genes chrX_8_20105001 chrX_20105001 RAL-301_75b 2300 chrX 20269942 20269957 chrX 20270021 20270035 7 79 2.0 3.5 2.8 1.8 93 chrX 20269942 intergenic Inx6 - chrX 20269988 intergenic Inx6 - chrX 20270035 intergenic Inx6 - chrX_7_20265001 chrX_20265001 RAL-301_75b 2301 chrX 20271511 20271528 chrX 20271603 20271620 6 92 1.0 0.0 0.5 4.0 109 chrX 20271511 intergenic not near genes chrX 20271566 intergenic not near genes chrX 20271620 intergenic not near genes chrX_6_20270001 chrX_20270001 RAL-301_75b 2302 chrX 20312881 20312909 chrX 20312959 20312987 9 78 3.5 1.0 2.2 2.8 106 chrX 20312881 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20312987 intron CG1504 - chrX_9_20310001 chrX_20310001 RAL-301_75b 2303 chrX 20369320 20369341 chrX 20369404 20369425 13 84 0.0 2.5 1.2 5.9 105 chrX 20369320 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369425 intergenic not near genes chrX_13_20365001 chrX_20365001 RAL-301_75b 2304 chrX 20443170 20443191 chrX 20443246 20443267 5 76 3.5 0.0 1.8 1.8 97 chrX 20443170 exon CG1695 + chrX 20443218 intron CG1695 + chrX 20443267 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-301_75b 2305 chrX 20497674 20497679 chrX 20497757 20497762 5 83 0.0 5.5 2.8 1.3 88 chrX 20497674 intron RhoGAP19D - chrX 20497718 intron RhoGAP19D - chrX 20497762 intron RhoGAP19D - chrX_5_20495001 chrX_20495001 RAL-301_75b 2306 chrX 20500236 20500250 chrX 20500320 20500333 5 84 4.5 3.5 4.0 1.0 97 chrX 20500236 intron RhoGAP19D - chrX 20500284 intron RhoGAP19D - chrX 20500333 intron RhoGAP19D - chrX_5_20500001 chrX_20500001 RAL-301_75b 2307 chrX 20503169 20503199 chrX 20503266 20503295 9 97 1.0 2.5 1.8 3.2 126 chrX 20503169 intron RhoGAP19D - chrX 20503232 intron RhoGAP19D - chrX 20503295 intron RhoGAP19D - chrX_9_20500001 chrX_20500001 RAL-301_75b 2308 chrX 20504127 20504156 chrX 20505647 20505677 transib2 14 1521 5.0 3.5 4.2 2.7 1550 chrX 20504127 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505677 intron RhoGAP19D - chrX_14_20500001 chrX_20500001 RAL-301_75b 2309 chrX 20546550 20546566 chrX 20546716 20546729 7 166 3.0 1.5 2.2 2.2 179 chrX 20546550 intron RunxB + chrX 20546640 intron RunxB + chrX 20546729 intron RunxB + chrX_7_20545001 chrX_20545001 RAL-301_75b 2310 chrX 20575159 20575181 chrX 20575235 20575259 9 77 7.0 2.0 4.5 1.6 100 chrX 20575159 intergenic CG42580 + chrX 20575209 intergenic not near genes chrX 20575259 intergenic not near genes chrX_9_20575001 chrX_20575001 RAL-301_75b 2311 chrX 20690082 20690095 chrX 20690164 20690178 6 82 1.5 0.5 1.0 3.0 96 chrX 20690082 intergenic CR45610 - chrX 20690130 intergenic CR45610 - chrX 20690178 intergenic CR45610 -,run + chrX_6_20690001 chrX_20690001 RAL-301_75b 2312 chrX 20705746 20705758 chrX 20705835 20705847 7 89 2.0 1.5 1.8 2.5 101 chrX 20705746 intergenic not near genes chrX 20705796 intergenic not near genes chrX 20705847 intergenic not near genes chrX_7_20705001 chrX_20705001 RAL-301_75b 2313 chrX 20741581 20741611 chrX 20741656 20741686 14 75 3.0 0.0 1.5 5.6 105 chrX 20741581 intergenic not near genes chrX 20741634 intergenic not near genes chrX 20741686 intergenic not near genes chrX_14_20740001 chrX_20740001 RAL-301_75b 2314 chrX 20810722 20810732 chrX 20810800 20810810 8 78 3.0 2.0 2.5 2.3 88 chrX 20810722 intron shakB - chrX 20810766 intron shakB - chrX 20810810 intron shakB - chrX_8_20810001 chrX_20810001 RAL-301_75b 2315 chrX 20899853 20899865 chrX 20899947 20899959 4 94 1.0 4.5 2.8 1.1 106 chrX 20899853 intron shakB - chrX 20899906 intron shakB - chrX 20899959 intron shakB - chrX_4_20895001 chrX_20895001 RAL-301_75b 2316 chrX 20915057 20915074 chrX 20915228 20915244 9 171 2.5 2.0 2.2 2.8 187 chrX 20915057 intron shakB - chrX 20915150 intron shakB - chrX 20915244 intron shakB - chrX_9_20915001 chrX_20915001 RAL-301_75b 2317 chrX 20940722 20940750 chrX 20942191 20942217 hobo 4 1468 3.5 4.0 3.8 0.8 1495 chrX 20940722 intergenic not near genes chrX 20941470 intergenic not near genes chrX 20942217 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-301_75b 2318 chrX 21029584 21029603 chrX 21029665 21029686 7 82 3.5 0.0 1.8 2.5 102 chrX 21029584 3` UTR CG1529 - chrX 21029635 3` UTR CG1529 - chrX 21029686 3` UTR CG1529 - chrX_7_21025001 chrX_21025001 RAL-301_75b 2319 chrX 21061877 21061888 chrX 21062360 21062372 roo 9 484 4.5 1.0 2.8 2.4 495 chrX 21061877 intron bves + chrX 21062124 intron bves + chrX 21062372 intron,3` UTR bves +,CG32512 - chrX_9_21060001 chrX_21060001 RAL-301_75b 2320 chrX 21076340 21076357 chrX 21076418 21076436 4 79 2.0 2.5 2.2 1.2 96 chrX 21076340 intron bves + chrX 21076388 intron bves + chrX 21076436 intron bves + chrX_4_21075001 chrX_21075001 RAL-301_75b 2321 chrX 21078771 21078776 chrX 21078849 21078854 4 78 4.5 1.0 2.8 1.1 83 chrX 21078771 intron bves + chrX 21078812 intron bves + chrX 21078854 intron bves + chrX_4_21075001 chrX_21075001 RAL-301_75b 2322 chrX 21086138 21086159 chrX 21087166 21087188 jockey 7 1029 6.0 3.0 4.5 1.3 1050 chrX 21086138 intergenic not near genes chrX 21086663 intergenic not near genes chrX 21087188 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-301_75b 2323 chrX 21088042 21088045 chrX 21088174 21088177 4 132 7.5 0.5 4.0 0.8 135 chrX 21088042 intergenic not near genes chrX 21088110 intergenic not near genes chrX 21088177 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-301_75b 2324 chrX 21197058 21197090 chrX 21197136 21197168 8 77 0.0 3.5 1.8 2.9 110 chrX 21197058 intergenic not near genes chrX 21197113 intergenic not near genes chrX 21197168 intergenic not near genes chrX_8_21195001 chrX_21195001 RAL-301_75b 2325 chrX 21358082 21358096 chrX 21358162 21358176 4 80 1.5 5.5 3.5 0.9 94 chrX 21358082 intergenic sol +,Sep1 + chrX 21358129 intergenic Sep1 +,sol + chrX 21358176 intergenic Sep1 +,sol + chrX_4_21355001 chrX_21355001 RAL-301_75b 2326 chrX 21388539 21388541 chrX 21388623 21388624 4 84 5.5 0.0 2.8 1.1 85 chrX 21388539 intergenic mst + chrX 21388582 intergenic mst + chrX 21388624 intergenic mst + chrX_4_21385001 chrX_21385001 RAL-301_75b 2327 chrX 21410488 21410500 chrX 21410569 21410583 4 82 0.0 0.0 0.0 4.0 95 chrX 21410488 3` UTR CR45003 - chrX 21410536 3` UTR CR45003 - chrX 21410583 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-301_75b 2328 chrX 21428338 21428355 chrX 21428527 21428545 13 189 5.0 1.0 3.0 3.2 207 chrX 21428338 intron CG42343 - chrX 21428442 intron CG42343 - chrX 21428545 intron CG42343 - chrX_13_21425001 chrX_21425001 RAL-301_75b 2329 chrX 21454865 21454871 chrX 21454949 21454955 4 84 4.5 0.5 2.5 1.1 90 chrX 21454865 intron CG42343 - chrX 21454910 intron CG42343 - chrX 21454955 intron CG42343 - chrX_4_21450001 chrX_21450001 RAL-301_75b 2330 chrX 21455215 21455223 chrX 21455393 21455402 5 179 1.0 0.0 0.5 3.3 187 chrX 21455215 intron CG42343 - chrX 21455308 intron CG42343 - chrX 21455402 intron CG42343 - chrX_5_21455001 chrX_21455001 RAL-301_75b 2331 chrX 21458695 21458718 chrX 21464131 21464153 Ivk 4 5436 0.0 2.0 1.0 2.0 5458 chrX 21458695 intergenic not near genes chrX 21461424 intergenic not near genes chrX 21464153 intergenic not near genes chrX_4_21460001 chrX_21460001 RAL-301_75b 2332 chrX 21474409 21474433 chrX 21474775 21474799 1731 10 366 2.0 3.5 2.8 2.6 390 chrX 21474409 intergenic not near genes chrX 21474604 intergenic not near genes chrX 21474799 intergenic not near genes chrX_10_21470001 chrX_21470001 RAL-301_75b 2333 chrX 21492278 21492306 chrX 21492391 21492416 13 112 1.5 2.5 2.0 4.3 138 chrX 21492278 intergenic not near genes chrX 21492347 intergenic not near genes chrX 21492416 intergenic not near genes chrX_13_21490001 chrX_21490001 RAL-301_75b 2334 chrX 21500562 21500589 chrX 21500763 21500790 7 201 0.0 1.0 0.5 4.7 228 chrX 21500562 intron CR45082 - chrX 21500676 intron CR45082 - chrX 21500790 intron CR45082 - chrX_7_21500001 chrX_21500001 RAL-301_75b 2335 chrX 21516992 21517021 chrX 21517071 21517100 11 78 1.0 6.0 3.5 2.4 108 chrX 21516992 intron CR45082 - chrX 21517046 intron CR45082 - chrX 21517100 intron CR45082 - chrX_11_21515001 chrX_21515001 RAL-301_75b 2336 chrX 21668256 21668282 chrX 21668341 21668367 8 84 4.0 2.0 3.0 2.0 111 chrX 21668256 intergenic not near genes chrX 21668312 intergenic not near genes chrX 21668367 intergenic not near genes chrX_8_21665001 chrX_21665001 RAL-301_75b 2337 chrX 22564561 22564571 chrX 22575134 22575143 jockey 7 10573 10.0 3.5 6.8 0.9 10582 chrX 22564561 intergenic not near genes chrX 22569852 intergenic not near genes chrX 22575143 intergenic not near genes chrX_7_22565001 chrX_22565001 RAL-301_75b 2338 chrX 22661974 22662009 chrX 22662073 22662108 11 99 0.0 0.0 0.0 11.0 134 chrX 22661974 intron CR44997 + chrX 22662041 intron CR44997 + chrX 22662108 intron CR44997 + chrX_11_22660001 chrX_22660001 RAL-301_75b 2339 chrX 22697487 22697519 chrX 22701784 22701816 Juan 5 4297 3.5 3.5 3.5 1.1 4329 chrX 22697487 intron CR44997 + chrX 22699652 intron CR44997 + chrX 22701816 intron CR44997 + chrX_5_22695001 chrX_22695001 RAL-301_75b 2340 chrX 22784084 22784102 chrX 22784167 22784185 4 83 0.5 0.5 0.5 2.7 101 chrX 22784084 intron CR44997 + chrX 22784134 intron CR44997 + chrX 22784185 intron CR44997 + chrX_4_22780001 chrX_22780001 RAL-301_75b 2341 chrX 22824231 22824447 chrX 22824355 22824580 15 129 0.5 1.0 0.8 8.3 349 chrX 22824231 intergenic fog - chrX 22824406 3` UTR fog - chrX 22824580 3` UTR fog - chrX_15_22820001 chrX_22820001 RAL-301_75b 2342 chrX 22870881 22870898 chrX 22870965 22870989 5 90 2.5 5.0 3.8 1.0 108 chrX 22870881 intron,3` UTR CG42346 +,CR43656 - chrX 22870935 intron,3` UTR CG42346 +,CR43656 - chrX 22870989 intron,3` UTR CG42346 +,CR43656 - chrX_5_22870001 chrX_22870001 RAL-301_75b 2343 chrX 22987101 22987129 chrX 22989760 22989786 Burdock 7 2658 1.0 3.0 2.0 2.3 2685 chrX 22987101 intron,intron stnA -,stnB - chrX 22988444 intron,intron stnA -,stnB - chrX 22989786 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-301_75b 2344 chrX 22996310 22996339 chrX 23003539 23003573 roo 12 7233 0.0 5.0 2.5 3.4 7263 chrX 22996310 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003573 intron,intron stnA -,stnB - chrX_12_22995001 chrX_22995001 RAL-301_75b 2345 chrY 311342 311346 chrY 311459 311463 5 117 1.0 0.5 0.8 2.8 121 chrY 311342 intergenic not near genes chrY 311402 intergenic not near genes chrY 311463 intergenic not near genes chrY_5_310001 chrY_310001 RAL-301_75b 2346 chrY 1420641 1420652 chrY 1420787 1420798 5 146 3.5 8.5 6.0 0.7 157 chrY 1420641 intergenic not near genes chrY 1420720 intergenic not near genes chrY 1420798 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-301_75b 2347 chrY 1431368 1431371 chrY 1447403 1447407 Doc 7 16036 5.5 10.0 7.8 0.8 16039 chrY 1431368 intergenic not near genes chrY 1439388 intergenic not near genes chrY 1447407 intergenic not near genes chrY_7_1435001 chrY_1435001 RAL-301_75b