SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46304 46379 chr2L 46431 46507 15 127 30.0 31.0 30.5 0.5 203 chr2L 46304 intron Cda5 - chr2L 46406 intron Cda5 - chr2L 46507 intron Cda5 - chr2L_15_45001 chr2L_45001 RAL-301_125b 2 chr2L 47424 47477 chr2L 52579 52632 jockey 27 5155 10.5 12.0 11.2 2.2 5208 chr2L 47424 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52632 intron Cda5 - chr2L_27_50001 chr2L_50001 RAL-301_125b 3 chr2L 62030 62090 chr2L 62237 62297 9 209 47.5 42.0 44.8 0.2 267 chr2L 62030 intron Cda5 - chr2L 62164 intron Cda5 - chr2L 62297 intron Cda5 - chr2L_9_60001 chr2L_60001 RAL-301_125b 4 chr2L 89684 89693 chr2L 89811 89820 4 127 36.5 24.5 30.5 0.1 136 chr2L 89684 intergenic not near genes chr2L 89752 intergenic not near genes chr2L 89820 intergenic not near genes chr2L_4_85001 chr2L_85001 RAL-301_125b 5 chr2L 89697 89720 chr2L 89809 89847 4 123 31.0 25.0 28.0 0.1 150 chr2L 89697 intergenic not near genes chr2L 89772 intergenic not near genes chr2L 89847 intergenic not near genes chr2L_4_85001 chr2L_85001 RAL-301_125b 6 chr2L 91166 91194 chr2L 91257 91290 4 104 18.0 19.5 18.8 0.2 124 chr2L 91166 intergenic not near genes chr2L 91228 intergenic not near genes chr2L 91290 intergenic not near genes chr2L_4_90001 chr2L_90001 RAL-301_125b 7 chr2L 127451 127517 chr2L 127596 127637 16 138 22.5 21.0 21.8 0.7 186 chr2L 127451 intron,intron CG11455 +,CG3164 - chr2L 127544 intron,intron CG11455 +,CG3164 - chr2L 127637 intron,intron CG11455 +,CG3164 - chr2L_16_125001 chr2L_125001 RAL-301_125b 8 chr2L 171455 171461 chr2L 171585 171591 4 130 14.0 25.5 19.8 0.2 136 chr2L 171455 intron spen + chr2L 171523 intron spen + chr2L 171591 intron spen + chr2L_4_170001 chr2L_170001 RAL-301_125b 9 chr2L 171979 172078 chr2L 172139 172209 24 143 3.5 7.0 5.2 3.9 230 chr2L 171979 intron spen + chr2L 172094 intron spen + chr2L 172209 intron spen + chr2L_24_170001 chr2L_170001 RAL-301_125b 10 chr2L 209804 209839 chr2L 209963 209988 18 158 27.5 18.0 22.8 0.8 184 chr2L 209804 exon Tbc1d15-17 + chr2L 209896 3` UTR Tbc1d15-17 + chr2L 209988 3` UTR Tbc1d15-17 + chr2L_18_205001 chr2L_205001 RAL-301_125b 11 chr2L 209847 209873 chr2L 210006 210032 11 159 18.5 25.5 22.0 0.5 185 chr2L 209847 exon Tbc1d15-17 + chr2L 209940 3` UTR Tbc1d15-17 + chr2L 210032 3` UTR Tbc1d15-17 + chr2L_11_205001 chr2L_205001 RAL-301_125b 12 chr2L 218867 218933 chr2L 218996 219062 19 129 21.5 19.5 20.5 0.9 195 chr2L 218867 exon kis - chr2L 218964 intron kis - chr2L 219062 intron kis - chr2L_19_215001 chr2L_215001 RAL-301_125b 13 chr2L 245503 245544 chr2L 245664 245705 11 161 20.0 16.0 18.0 0.6 202 chr2L 245503 intron kis - chr2L 245604 intron kis - chr2L 245705 intron kis - chr2L_11_245001 chr2L_245001 RAL-301_125b 14 chr2L 263271 263318 chr2L 263467 263514 15 196 5.0 9.5 7.2 1.8 243 chr2L 263271 intron,3` UTR CG3645 -,CG17075 - chr2L 263392 intron,3` UTR CG3645 -,CG17075 - chr2L 263514 intron,3` UTR CG3645 -,CG17075 - chr2L_15_260001 chr2L_260001 RAL-301_125b 15 chr2L 297624 297717 chr2L 297786 297842 20 156 14.0 16.0 15.0 1.2 218 chr2L 297624 intergenic Hop +,Pi3K21B + chr2L 297733 intergenic Pi3K21B +,Hop + chr2L 297842 intergenic Pi3K21B +,Hop + chr2L_20_295001 chr2L_295001 RAL-301_125b 16 chr2L 314088 314302 chr2L 314215 314439 23 128 41.0 25.0 33.0 0.7 351 chr2L 314088 intron Plc21C + chr2L 314264 intron Plc21C + chr2L 314439 intron Plc21C + chr2L_23_310001 chr2L_310001 RAL-301_125b 17 chr2L 315726 315802 chr2L 315867 315943 15 141 18.0 14.5 16.2 0.9 217 chr2L 315726 intron Plc21C + chr2L 315834 intron Plc21C + chr2L 315943 intron Plc21C + chr2L_15_315001 chr2L_315001 RAL-301_125b 18 chr2L 319864 319934 chr2L 319999 320069 30 135 11.5 14.5 13.0 2.1 205 chr2L 319864 intron Plc21C + chr2L 319966 intron Plc21C + chr2L 320069 intron Plc21C + chr2L_30_315001 chr2L_315001 RAL-301_125b 19 chr2L 325094 325145 chr2L 325221 325272 29 125 15.5 12.5 14.0 1.9 178 chr2L 325094 intron Plc21C + chr2L 325183 intron Plc21C + chr2L 325272 intron Plc21C + chr2L_29_325001 chr2L_325001 RAL-301_125b 20 chr2L 347849 347911 chr2L 355399 355461 blood 25 7550 8.5 9.0 8.8 2.6 7612 chr2L 347849 3` UTR Plc21C + chr2L 351655 intron Plc21C + chr2L 355461 3` UTR Plc21C + chr2L_25_350001 chr2L_350001 RAL-301_125b 21 chr2L 371393 371452 chr2L 371522 371581 27 129 10.5 12.5 11.5 2.2 188 chr2L 371393 intergenic not near genes chr2L 371487 intergenic not near genes chr2L 371581 intergenic not near genes chr2L_27_370001 chr2L_370001 RAL-301_125b 22 chr2L 395954 396022 chr2L 396082 396147 26 127 17.0 10.5 13.8 1.8 193 chr2L 395954 intergenic CR43718 + chr2L 396050 intergenic CR43718 + chr2L 396147 5` UTR CR43718 + chr2L_26_395001 chr2L_395001 RAL-301_125b 23 chr2L 407904 407957 chr2L 408035 408088 12 131 31.0 31.5 31.2 0.4 184 chr2L 407904 3` UTR RpI135 + chr2L 407996 intergenic RpI135 +,AP-2alpha - chr2L 408088 3` UTR AP-2alpha - chr2L_12_405001 chr2L_405001 RAL-301_125b 24 chr2L 595211 595291 chr2L 595500 595548 11 281 25.5 27.5 26.5 0.4 337 chr2L 595211 intergenic not near genes chr2L 595380 intergenic not near genes chr2L 595548 intergenic not near genes chr2L_11_595001 chr2L_595001 RAL-301_125b 25 chr2L 606222 606248 chr2L 607161 607212 4 958 15.0 19.0 17.0 0.2 990 chr2L 606222 5` UTR CR43648 + chr2L 606717 intergenic CR43648 + chr2L 607212 intergenic not near genes chr2L_4_605001 chr2L_605001 RAL-301_125b 26 chr2L 630275 630335 chr2L 630417 630451 16 137 16.5 19.5 18.0 0.8 176 chr2L 630275 intergenic not near genes chr2L 630363 intergenic not near genes chr2L 630451 intergenic not near genes chr2L_16_630001 chr2L_630001 RAL-301_125b 27 chr2L 632680 632727 chr2L 632810 632857 6 130 23.5 22.0 22.8 0.3 177 chr2L 632680 intergenic not near genes chr2L 632768 intergenic not near genes chr2L 632857 intergenic not near genes chr2L_6_630001 chr2L_630001 RAL-301_125b 28 chr2L 668400 668463 chr2L 668517 668594 22 129 18.0 19.5 18.8 1.1 194 chr2L 668400 intron ds - chr2L 668497 intron ds - chr2L 668594 intron ds - chr2L_22_665001 chr2L_665001 RAL-301_125b 29 chr2L 677741 677808 chr2L 677880 677945 23 132 17.5 19.5 18.5 1.2 204 chr2L 677741 intron ds - chr2L 677843 intron ds - chr2L 677945 intron ds - chr2L_23_675001 chr2L_675001 RAL-301_125b 30 chr2L 680697 680757 chr2L 680903 680959 4 203 1.0 8.5 4.8 0.7 262 chr2L 680697 intron ds - chr2L 680828 intron ds - chr2L 680959 intron ds - chr2L_4_680001 chr2L_680001 RAL-301_125b 31 chr2L 686922 686940 chr2L 696001 696028 roo 12 9089 9.5 21.0 15.2 0.7 9106 chr2L 686922 intron ds - chr2L 691475 intron ds - chr2L 696028 intron ds - chr2L_12_690001 chr2L_690001 RAL-301_125b 32 chr2L 721182 721188 chr2L 721445 721451 6 263 24.5 12.0 18.2 0.3 269 chr2L 721182 intergenic not near genes chr2L 721316 intergenic not near genes chr2L 721451 intergenic not near genes chr2L_6_720001 chr2L_720001 RAL-301_125b 33 chr2L 736828 736901 chr2L 736983 737056 17 155 24.0 23.0 23.5 0.7 228 chr2L 736828 intergenic Eaat2 - chr2L 736942 intergenic Eaat2 - chr2L 737056 intergenic Eaat2 - chr2L_17_735001 chr2L_735001 RAL-301_125b 34 chr2L 746551 746572 chr2L 746667 746698 11 123 15.5 10.5 13.0 0.8 147 chr2L 746551 intergenic not near genes chr2L 746624 intergenic not near genes chr2L 746698 intergenic not near genes chr2L_11_745001 chr2L_745001 RAL-301_125b 35 chr2L 763554 763594 chr2L 763680 763703 11 121 28.5 24.5 26.5 0.4 149 chr2L 763554 intergenic not near genes chr2L 763628 intergenic not near genes chr2L 763703 intergenic not near genes chr2L_11_760001 chr2L_760001 RAL-301_125b 36 chr2L 764514 764586 chr2L 764645 764717 17 139 8.0 7.5 7.8 1.9 203 chr2L 764514 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764717 intergenic not near genes chr2L_17_760001 chr2L_760001 RAL-301_125b 37 chr2L 770419 770490 chr2L 772250 772290 Bari1 28 1825 9.5 11.0 10.2 2.5 1871 chr2L 770419 intergenic not near genes chr2L 771354 intergenic not near genes chr2L 772290 intergenic CR44614 + chr2L_28_770001 chr2L_770001 RAL-301_125b 38 chr2L 793933 793940 chr2L 794124 794131 6 191 36.0 12.5 24.2 0.2 198 chr2L 793933 intergenic not near genes chr2L 794032 intergenic not near genes chr2L 794131 intergenic not near genes chr2L_6_790001 chr2L_790001 RAL-301_125b 39 chr2L 793941 793991 chr2L 794121 794177 14 190 24.5 13.5 19.0 0.7 236 chr2L 793941 intergenic not near genes chr2L 794059 intergenic not near genes chr2L 794177 intergenic not near genes chr2L_14_790001 chr2L_790001 RAL-301_125b 40 chr2L 795228 795293 chr2L 795384 795463 7 165 28.0 27.5 27.8 0.2 235 chr2L 795228 intergenic not near genes chr2L 795346 intergenic not near genes chr2L 795463 intergenic not near genes chr2L_7_795001 chr2L_795001 RAL-301_125b 41 chr2L 819781 819852 chr2L 819940 819992 18 153 15.5 24.0 19.8 0.9 211 chr2L 819781 intergenic Clp +,CG3876 - chr2L 819886 intergenic Clp +,CG3876 - chr2L 819992 5` UTR Clp + chr2L_18_815001 chr2L_815001 RAL-301_125b 42 chr2L 844902 844967 chr2L 845039 845090 12 133 32.0 34.5 33.2 0.4 188 chr2L 844902 intron drongo - chr2L 844996 intron drongo - chr2L 845090 intron drongo - chr2L_12_840001 chr2L_840001 RAL-301_125b 43 chr2L 850777 850845 chr2L 850912 850980 5 135 30.0 28.5 29.2 0.2 203 chr2L 850777 5` UTR,5` UTR drongo -,CR44060 + chr2L 850878 5` UTR,5` UTR drongo -,CR44060 + chr2L 850980 5` UTR,5` UTR drongo -,CR44060 + chr2L_5_850001 chr2L_850001 RAL-301_125b 44 chr2L 877804 877869 chr2L 877933 877976 24 127 12.0 13.5 12.8 1.7 172 chr2L 877804 3` UTR,exon CG15824 -,ninaA + chr2L 877890 3` UTR,intron CG15824 -,ninaA + chr2L 877976 3` UTR,exon CG15824 -,ninaA + chr2L_24_875001 chr2L_875001 RAL-301_125b 45 chr2L 898165 898172 chr2L 898301 898308 4 134 18.5 18.5 18.5 0.2 143 chr2L 898165 intergenic CR45348 -,Lsp1beta + chr2L 898236 intergenic CR45348 -,Lsp1beta + chr2L 898308 intergenic Lsp1beta +,CR45348 - chr2L_4_895001 chr2L_895001 RAL-301_125b 46 chr2L 919879 919929 chr2L 920005 920055 20 125 11.5 7.0 9.2 2.0 176 chr2L 919879 intergenic not near genes chr2L 919967 intergenic not near genes chr2L 920055 intergenic not near genes chr2L_20_915001 chr2L_915001 RAL-301_125b 47 chr2L 922415 922490 chr2L 922546 922621 37 130 9.0 8.0 8.5 3.9 206 chr2L 922415 intergenic CG4341 + chr2L 922518 intergenic CG4341 + chr2L 922621 intergenic CG4341 + chr2L_37_920001 chr2L_920001 RAL-301_125b 48 chr2L 931587 931662 chr2L 931716 931776 15 128 20.0 21.0 20.5 0.7 189 chr2L 931587 intron CG4341 + chr2L 931682 intron CG4341 + chr2L 931776 intron CG4341 + chr2L_15_930001 chr2L_930001 RAL-301_125b 49 chr2L 935331 935407 chr2L 935465 935536 15 128 5.5 5.5 5.5 2.3 205 chr2L 935331 intron CG4341 + chr2L 935434 intron CG4341 + chr2L 935536 intron CG4341 + chr2L_15_935001 chr2L_935001 RAL-301_125b 50 chr2L 936540 936585 chr2L 936680 936725 6 140 37.0 33.5 35.2 0.2 185 chr2L 936540 intron CG4341 + chr2L 936632 intron CG4341 + chr2L 936725 intron CG4341 + chr2L_6_935001 chr2L_935001 RAL-301_125b 51 chr2L 955988 955994 chr2L 956132 956138 4 145 0.0 23.5 11.8 0.3 150 chr2L 955988 intron CG4341 + chr2L 956063 intron CG4341 + chr2L 956138 intron CG4341 + chr2L_4_955001 chr2L_955001 RAL-301_125b 52 chr2L 971892 971941 chr2L 972013 972067 6 117 19.0 17.5 18.2 0.3 175 chr2L 971892 intergenic not near genes chr2L 971980 intergenic not near genes chr2L 972067 intergenic not near genes chr2L_6_970001 chr2L_970001 RAL-301_125b 53 chr2L 976833 976913 chr2L 984519 984599 roo 25 7686 6.5 7.5 7.0 3.1 7766 chr2L 976833 intergenic not near genes chr2L 980716 intergenic not near genes chr2L 984599 intergenic not near genes chr2L_25_980001 chr2L_980001 RAL-301_125b 54 chr2L 986059 986113 chr2L 986193 986252 23 146 14.0 15.0 14.5 1.5 193 chr2L 986059 intergenic not near genes chr2L 986156 intergenic not near genes chr2L 986252 intergenic not near genes chr2L_23_985001 chr2L_985001 RAL-301_125b 55 chr2L 989328 989393 chr2L 989465 989510 22 135 13.5 12.0 12.8 1.6 182 chr2L 989328 intron CR44801 - chr2L 989419 3` UTR CR44801 - chr2L 989510 3` UTR CR44801 - chr2L_22_985001 chr2L_985001 RAL-301_125b 56 chr2L 996672 996746 chr2L 1005817 1005892 roo 21 9145 1.0 7.5 4.2 4.0 9220 chr2L 996672 intergenic not near genes chr2L 1001282 intergenic not near genes chr2L 1005892 intergenic not near genes chr2L_21_1000001 chr2L_1000001 RAL-301_125b 57 chr2L 1005855 1005929 chr2L 1005991 1006064 16 135 30.5 32.5 31.5 0.5 209 chr2L 1005855 intergenic not near genes chr2L 1005960 intergenic not near genes chr2L 1006064 intergenic not near genes chr2L_16_1005001 chr2L_1005001 RAL-301_125b 58 chr2L 1006769 1006851 chr2L 1006922 1006993 10 143 13.5 15.0 14.2 0.7 224 chr2L 1006769 intergenic not near genes chr2L 1006881 intergenic not near genes chr2L 1006993 intergenic not near genes chr2L_10_1005001 chr2L_1005001 RAL-301_125b 59 chr2L 1025070 1025120 chr2L 1025200 1025221 17 125 11.0 11.0 11.0 1.4 151 chr2L 1025070 intron IA-2 - chr2L 1025146 intron IA-2 - chr2L 1025221 intron IA-2 - chr2L_17_1025001 chr2L_1025001 RAL-301_125b 60 chr2L 1026152 1026176 chr2L 1026278 1026297 12 126 23.0 12.0 17.5 0.6 145 chr2L 1026152 intron,3` UTR IA-2 -,CG4375 - chr2L 1026224 intron,3` UTR IA-2 -,CG4375 - chr2L 1026297 intron,exon IA-2 -,CG4375 - chr2L_12_1025001 chr2L_1025001 RAL-301_125b 61 chr2L 1028825 1028865 chr2L 1028940 1028954 10 112 11.0 8.5 9.8 0.9 129 chr2L 1028825 intron IA-2 - chr2L 1028890 intron IA-2 - chr2L 1028954 intron IA-2 - chr2L_10_1025001 chr2L_1025001 RAL-301_125b 62 chr2L 1035516 1035588 chr2L 1035643 1035715 13 126 32.5 28.0 30.2 0.4 199 chr2L 1035516 intron IA-2 - chr2L 1035616 intron IA-2 - chr2L 1035715 intron IA-2 - chr2L_13_1035001 chr2L_1035001 RAL-301_125b 63 chr2L 1036336 1036475 chr2L 1036476 1036626 6 138 9.5 10.5 10.0 0.5 290 chr2L 1036336 intron IA-2 - chr2L 1036481 intron IA-2 - chr2L 1036626 intron IA-2 - chr2L_6_1035001 chr2L_1035001 RAL-301_125b 64 chr2L 1042622 1042634 chr2L 1042749 1042761 6 126 2.0 9.0 5.5 0.9 139 chr2L 1042622 intron IA-2 - chr2L 1042692 intron IA-2 - chr2L 1042761 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-301_125b 65 chr2L 1074013 1074080 chr2L 1074143 1074210 14 129 22.5 20.0 21.2 0.6 197 chr2L 1074013 intron S - chr2L 1074112 intron S - chr2L 1074210 intron S - chr2L_14_1070001 chr2L_1070001 RAL-301_125b 66 chr2L 1089927 1089993 chr2L 1090173 1090239 13 246 18.5 22.5 20.5 0.6 312 chr2L 1089927 intron CG4629 - chr2L 1090083 intron CG4629 - chr2L 1090239 intron CG4629 - chr2L_13_1090001 chr2L_1090001 RAL-301_125b 67 chr2L 1090333 1090380 chr2L 1090467 1090520 11 139 16.0 19.0 17.5 0.6 187 chr2L 1090333 intron CG4629 - chr2L 1090426 intron CG4629 - chr2L 1090520 intron CG4629 - chr2L_11_1090001 chr2L_1090001 RAL-301_125b 68 chr2L 1096332 1096408 chr2L 1096461 1096537 13 127 19.5 21.0 20.2 0.6 205 chr2L 1096332 intron CG4629 - chr2L 1096434 intron CG4629 - chr2L 1096537 intron CG4629 - chr2L_13_1095001 chr2L_1095001 RAL-301_125b 69 chr2L 1156818 1156888 chr2L 1156973 1157043 25 153 6.5 11.0 8.8 2.6 225 chr2L 1156818 intron capt - chr2L 1156930 intron capt - chr2L 1157043 intron capt - chr2L_25_1155001 chr2L_1155001 RAL-301_125b 70 chr2L 1188524 1188600 chr2L 1188736 1188803 9 210 28.5 37.0 32.8 0.3 279 chr2L 1188524 intron CG5001 + chr2L 1188664 intron CG5001 + chr2L 1188803 intron CG5001 + chr2L_9_1185001 chr2L_1185001 RAL-301_125b 71 chr2L 1192629 1192696 chr2L 1192782 1192849 22 152 19.0 21.5 20.2 1.0 220 chr2L 1192629 intron CG5001 + chr2L 1192739 intron CG5001 + chr2L 1192849 intron CG5001 + chr2L_22_1190001 chr2L_1190001 RAL-301_125b 72 chr2L 1199821 1199864 chr2L 1199979 1200022 7 158 15.5 20.0 17.8 0.4 201 chr2L 1199821 3` UTR CG43348 + chr2L 1199922 3` UTR CG43348 + chr2L 1200022 intergenic CG43348 +,CG43349 + chr2L_7_1195001 chr2L_1195001 RAL-301_125b 73 chr2L 1220086 1220161 chr2L 1227602 1227677 blood 29 7513 9.0 5.5 7.2 3.5 7591 chr2L 1220086 intron CG42329 + chr2L 1223882 intron CG42329 + chr2L 1227677 intron CG42329 + chr2L_29_1220001 chr2L_1220001 RAL-301_125b 74 chr2L 1237944 1238000 chr2L 1238078 1238134 17 134 21.5 25.0 23.2 0.7 190 chr2L 1237944 intergenic not near genes chr2L 1238039 intergenic not near genes chr2L 1238134 intergenic not near genes chr2L_17_1235001 chr2L_1235001 RAL-301_125b 75 chr2L 1244365 1244418 chr2L 1244492 1244545 15 126 17.5 17.5 17.5 0.8 180 chr2L 1244365 intergenic not near genes chr2L 1244455 intergenic not near genes chr2L 1244545 intergenic not near genes chr2L_15_1240001 chr2L_1240001 RAL-301_125b 76 chr2L 1254362 1254385 chr2L 1254490 1254507 10 127 22.0 32.5 27.2 0.4 145 chr2L 1254362 intergenic not near genes chr2L 1254434 intergenic not near genes chr2L 1254507 intergenic not near genes chr2L_10_1250001 chr2L_1250001 RAL-301_125b 77 chr2L 1261210 1261260 chr2L 1261341 1261390 15 128 6.0 16.5 11.2 1.2 180 chr2L 1261210 intron robo3 + chr2L 1261300 intron robo3 + chr2L 1261390 intron robo3 + chr2L_15_1260001 chr2L_1260001 RAL-301_125b 78 chr2L 1262692 1262765 chr2L 1262861 1262899 9 159 25.0 25.5 25.2 0.3 207 chr2L 1262692 intron robo3 + chr2L 1262796 intron robo3 + chr2L 1262899 intron robo3 + chr2L_9_1260001 chr2L_1260001 RAL-301_125b 79 chr2L 1291784 1291860 chr2L 1296177 1296253 11 4398 51.0 38.5 44.8 0.2 4469 chr2L 1291784 intron robo3 + chr2L 1294018 3` UTR robo3 + chr2L 1296253 3` UTR robo3 + chr2L_11_1290001 chr2L_1290001 RAL-301_125b 80 chr2L 1312835 1312846 chr2L 1312965 1312983 4 135 16.5 18.5 17.5 0.2 148 chr2L 1312835 intergenic not near genes chr2L 1312909 intergenic not near genes chr2L 1312983 intergenic not near genes chr2L_4_1310001 chr2L_1310001 RAL-301_125b 81 chr2L 1312856 1312892 chr2L 1312958 1313021 9 126 13.0 18.5 15.8 0.5 165 chr2L 1312856 intergenic not near genes chr2L 1312938 intergenic not near genes chr2L 1313021 intergenic not near genes chr2L_9_1310001 chr2L_1310001 RAL-301_125b 82 chr2L 1322008 1322040 chr2L 1322147 1322179 6 134 30.5 33.0 31.8 0.2 171 chr2L 1322008 intergenic not near genes chr2L 1322094 intergenic not near genes chr2L 1322179 intergenic not near genes chr2L_6_1320001 chr2L_1320001 RAL-301_125b 83 chr2L 1331892 1331903 chr2L 1332058 1332069 5 166 24.0 13.0 18.5 0.3 177 chr2L 1331892 intergenic not near genes chr2L 1331980 intergenic not near genes chr2L 1332069 intergenic not near genes chr2L_5_1330001 chr2L_1330001 RAL-301_125b 84 chr2L 1349395 1349454 chr2L 1349528 1349586 9 130 31.5 33.0 32.2 0.3 191 chr2L 1349395 intergenic not near genes chr2L 1349490 intergenic not near genes chr2L 1349586 intergenic not near genes chr2L_9_1345001 chr2L_1345001 RAL-301_125b 85 chr2L 1428293 1428348 chr2L 1428433 1428489 18 140 10.0 11.5 10.8 1.5 196 chr2L 1428293 intergenic CG43401 + chr2L 1428391 intergenic CG43401 + chr2L 1428489 5` UTR CG43401 + chr2L_18_1425001 chr2L_1425001 RAL-301_125b 86 chr2L 1458195 1458254 chr2L 1458322 1458380 15 124 21.5 15.5 18.5 0.8 185 chr2L 1458195 intergenic not near genes chr2L 1458288 intergenic not near genes chr2L 1458380 intergenic not near genes chr2L_15_1455001 chr2L_1455001 RAL-301_125b 87 chr2L 1464110 1464165 chr2L 1464392 1464447 12 282 34.0 33.0 33.5 0.3 337 chr2L 1464110 intergenic not near genes chr2L 1464278 intergenic not near genes chr2L 1464447 intergenic not near genes chr2L_12_1460001 chr2L_1460001 RAL-301_125b 88 chr2L 1506553 1506625 chr2L 1506732 1506796 18 175 16.0 17.5 16.8 1.0 243 chr2L 1506553 intergenic not near genes chr2L 1506674 intergenic not near genes chr2L 1506796 intergenic not near genes chr2L_18_1505001 chr2L_1505001 RAL-301_125b 89 chr2L 1512873 1512942 chr2L 1513009 1513078 32 136 21.5 20.0 20.8 1.5 205 chr2L 1512873 intergenic not near genes chr2L 1512976 intergenic not near genes chr2L 1513078 intergenic not near genes chr2L_32_1510001 chr2L_1510001 RAL-301_125b 90 chr2L 1570647 1570710 chr2L 1573569 1573632 F-element 28 2922 13.5 7.5 10.5 2.4 2985 chr2L 1570647 intron haf + chr2L 1572140 intron haf + chr2L 1573632 intron haf + chr2L_28_1570001 chr2L_1570001 RAL-301_125b 91 chr2L 1580265 1580334 chr2L 1580523 1580592 10 258 20.5 20.5 20.5 0.5 327 chr2L 1580265 intron haf + chr2L 1580428 intron haf + chr2L 1580592 intron haf + chr2L_10_1580001 chr2L_1580001 RAL-301_125b 92 chr2L 1591820 1591889 chr2L 1591954 1592022 16 133 6.0 10.0 8.0 1.8 202 chr2L 1591820 intron haf + chr2L 1591921 intron haf + chr2L 1592022 intron haf + chr2L_16_1590001 chr2L_1590001 RAL-301_125b 93 chr2L 1620266 1620293 chr2L 1620392 1620419 11 126 5.5 24.0 14.8 0.7 153 chr2L 1620266 3` UTR CR44603 - chr2L 1620342 3` UTR CR44603 - chr2L 1620419 3` UTR CR44603 - chr2L_11_1620001 chr2L_1620001 RAL-301_125b 94 chr2L 1628811 1628893 chr2L 1628950 1629024 9 134 14.5 11.5 13.0 0.6 213 chr2L 1628811 intergenic not near genes chr2L 1628918 intergenic not near genes chr2L 1629024 intergenic not near genes chr2L_9_1625001 chr2L_1625001 RAL-301_125b 95 chr2L 1634722 1634763 chr2L 1634857 1634891 22 135 12.0 19.0 15.5 1.3 169 chr2L 1634722 intergenic not near genes chr2L 1634806 intergenic not near genes chr2L 1634891 intergenic not near genes chr2L_22_1630001 chr2L_1630001 RAL-301_125b 96 chr2L 1635375 1635396 chr2L 1635505 1635526 9 130 13.5 14.0 13.8 0.6 151 chr2L 1635375 intergenic not near genes chr2L 1635450 intergenic not near genes chr2L 1635526 intergenic not near genes chr2L_9_1635001 chr2L_1635001 RAL-301_125b 97 chr2L 1678931 1678993 chr2L 1686446 1686508 blood 24 7515 11.5 6.5 9.0 2.4 7577 chr2L 1678931 intron chinmo + chr2L 1682720 intron chinmo + chr2L 1686508 intron chinmo + chr2L_24_1680001 chr2L_1680001 RAL-301_125b 98 chr2L 1711310 1711378 chr2L 1711684 1711752 mdg3 33 371 5.0 15.0 10.0 3.0 442 chr2L 1711310 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711531 3` UTR frtz - chr2L 1711752 exon frtz - chr2L_33_1710001 chr2L_1710001 RAL-301_125b 99 chr2L 1724768 1724818 chr2L 1724900 1724950 12 132 32.0 29.5 30.8 0.4 182 chr2L 1724768 3` UTR Eno - chr2L 1724859 3` UTR Eno - chr2L 1724950 3` UTR Eno - chr2L_12_1720001 chr2L_1720001 RAL-301_125b 100 chr2L 1744411 1744471 chr2L 1744545 1744604 8 134 0.0 8.5 4.2 1.5 193 chr2L 1744411 intron CG17646 + chr2L 1744508 intron CG17646 + chr2L 1744604 intron CG17646 + chr2L_8_1740001 chr2L_1740001 RAL-301_125b 101 chr2L 1761162 1761229 chr2L 1761290 1761355 16 120 15.0 14.0 14.5 1.0 193 chr2L 1761162 intergenic not near genes chr2L 1761258 intergenic not near genes chr2L 1761355 intergenic not near genes chr2L_16_1760001 chr2L_1760001 RAL-301_125b 102 chr2L 1814360 1814380 chr2L 1814496 1814516 4 136 42.5 20.0 31.2 0.1 156 chr2L 1814360 intergenic not near genes chr2L 1814438 intergenic not near genes chr2L 1814516 intergenic not near genes chr2L_4_1810001 chr2L_1810001 RAL-301_125b 103 chr2L 1849275 1849356 chr2L 1849419 1849497 7 143 14.0 14.0 14.0 0.5 222 chr2L 1849275 intron wry + chr2L 1849386 intron wry + chr2L 1849497 intron wry + chr2L_7_1845001 chr2L_1845001 RAL-301_125b 104 chr2L 1852983 1852997 chr2L 1853139 1853153 7 156 11.5 14.0 12.8 0.5 170 chr2L 1852983 intron wry + chr2L 1853068 intron wry + chr2L 1853153 intron wry + chr2L_7_1850001 chr2L_1850001 RAL-301_125b 105 chr2L 1883435 1883444 chr2L 1884081 1884090 7 646 13.5 11.5 12.5 0.5 655 chr2L 1883435 intron CG15358 - chr2L 1883762 exon CG15358 - chr2L 1884090 intergenic CG15358 - chr2L_7_1880001 chr2L_1880001 RAL-301_125b 106 chr2L 1901457 1901489 chr2L 1901584 1901616 10 123 32.0 27.0 29.5 0.3 159 chr2L 1901457 intron CG7337 + chr2L 1901536 intron CG7337 + chr2L 1901616 intron CG7337 + chr2L_10_1900001 chr2L_1900001 RAL-301_125b 107 chr2L 1901494 1901504 chr2L 1901617 1901631 7 125 27.5 33.0 30.2 0.2 137 chr2L 1901494 intron CG7337 + chr2L 1901562 intron CG7337 + chr2L 1901631 intron CG7337 + chr2L_7_1900001 chr2L_1900001 RAL-301_125b 108 chr2L 1905049 1905107 chr2L 1905202 1905260 21 153 15.5 18.5 17.0 1.2 211 chr2L 1905049 intron CG7337 + chr2L 1905154 intron CG7337 + chr2L 1905260 intron CG7337 + chr2L_21_1905001 chr2L_1905001 RAL-301_125b 109 chr2L 1910492 1910550 chr2L 1910631 1910689 7 139 25.5 19.0 22.2 0.3 197 chr2L 1910492 intron CG7337 + chr2L 1910590 intron CG7337 + chr2L 1910689 intron CG7337 + chr2L_7_1910001 chr2L_1910001 RAL-301_125b 110 chr2L 1918351 1918357 chr2L 1918478 1918484 4 127 14.0 14.5 14.2 0.3 133 chr2L 1918351 intron CG7337 + chr2L 1918418 intron CG7337 + chr2L 1918484 intron CG7337 + chr2L_4_1915001 chr2L_1915001 RAL-301_125b 111 chr2L 1925453 1925500 chr2L 1925580 1925627 12 125 21.5 28.5 25.0 0.5 174 chr2L 1925453 intron CG7337 + chr2L 1925540 intron CG7337 + chr2L 1925627 intron CG7337 + chr2L_12_1925001 chr2L_1925001 RAL-301_125b 112 chr2L 1933613 1933683 chr2L 1933743 1933813 19 131 10.0 14.0 12.0 1.5 200 chr2L 1933613 intron CG7337 + chr2L 1933713 intron CG7337 + chr2L 1933813 exon CG7337 + chr2L_19_1930001 chr2L_1930001 RAL-301_125b 113 chr2L 1948590 1948657 chr2L 1948747 1948816 7 157 4.5 15.5 10.0 0.6 226 chr2L 1948590 intergenic not near genes chr2L 1948703 intergenic not near genes chr2L 1948816 intergenic not near genes chr2L_7_1945001 chr2L_1945001 RAL-301_125b 114 chr2L 1987936 1987954 chr2L 1988101 1988119 5 165 12.5 17.5 15.0 0.3 183 chr2L 1987936 intergenic Got2 -,Npc2a + chr2L 1988028 intergenic Npc2a +,Got2 - chr2L 1988119 intergenic Npc2a +,Got2 - chr2L_5_1985001 chr2L_1985001 RAL-301_125b 115 chr2L 2046286 2046355 chr2L 2046413 2046482 22 126 18.5 16.5 17.5 1.2 196 chr2L 2046286 intron Kebab + chr2L 2046384 intron Kebab + chr2L 2046482 exon Kebab + chr2L_22_2045001 chr2L_2045001 RAL-301_125b 116 chr2L 2073311 2073336 chr2L 2073437 2073464 6 127 23.5 15.5 19.5 0.3 153 chr2L 2073311 intron dpr3 - chr2L 2073388 intron dpr3 - chr2L 2073464 intron dpr3 - chr2L_6_2070001 chr2L_2070001 RAL-301_125b 117 chr2L 2073339 2073355 chr2L 2073436 2073468 4 111 18.5 15.0 16.8 0.2 129 chr2L 2073339 intron dpr3 - chr2L 2073404 intron dpr3 - chr2L 2073468 intron dpr3 - chr2L_4_2070001 chr2L_2070001 RAL-301_125b 118 chr2L 2100379 2100389 chr2L 2109550 2109590 roo 4 9184 14.5 16.5 15.5 0.2 9211 chr2L 2100379 intron dpr3 - chr2L 2104984 intron dpr3 - chr2L 2109590 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-301_125b 119 chr2L 2100390 2100401 chr2L 2109543 2109551 roo 7 9172 13.0 12.5 12.8 0.5 9161 chr2L 2100390 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_7_2100001 chr2L_2100001 RAL-301_125b 120 chr2L 2112063 2112126 chr2L 2119775 2119838 opus 18 7706 11.0 8.5 9.8 1.7 7775 chr2L 2112063 intergenic not near genes chr2L 2115950 intergenic not near genes chr2L 2119838 intergenic not near genes chr2L_18_2115001 chr2L_2115001 RAL-301_125b 121 chr2L 2121908 2121964 chr2L 2122109 2122163 6 201 36.5 27.0 31.8 0.2 255 chr2L 2121908 intergenic not near genes chr2L 2122036 intergenic not near genes chr2L 2122163 intergenic not near genes chr2L_6_2120001 chr2L_2120001 RAL-301_125b 122 chr2L 2207627 2207690 chr2L 2207758 2207821 28 124 18.0 25.0 21.5 1.2 194 chr2L 2207627 exon CG33124 - chr2L 2207724 exon CG33124 - chr2L 2207821 exon CG33124 - chr2L_28_2205001 chr2L_2205001 RAL-301_125b 123 chr2L 2256426 2256471 chr2L 2256556 2256601 14 130 7.0 5.0 6.0 2.0 175 chr2L 2256426 intergenic not near genes chr2L 2256514 intergenic not near genes chr2L 2256601 intergenic not near genes chr2L_14_2255001 chr2L_2255001 RAL-301_125b 124 chr2L 2260785 2260814 chr2L 2260921 2260931 6 133 25.0 26.5 25.8 0.2 146 chr2L 2260785 intergenic not near genes chr2L 2260858 intergenic not near genes chr2L 2260931 intergenic not near genes chr2L_6_2260001 chr2L_2260001 RAL-301_125b 125 chr2L 2262266 2262333 chr2L 2262385 2262460 21 127 9.0 2.0 5.5 3.2 194 chr2L 2262266 intergenic not near genes chr2L 2262363 intergenic not near genes chr2L 2262460 intergenic not near genes chr2L_21_2260001 chr2L_2260001 RAL-301_125b 126 chr2L 2290532 2290615 chr2L 2290657 2290720 16 121 18.5 21.5 20.0 0.8 188 chr2L 2290532 exon robl22E - chr2L 2290626 5` UTR robl22E - chr2L 2290720 5` UTR robl22E - chr2L_16_2290001 chr2L_2290001 RAL-301_125b 127 chr2L 2293260 2293499 chr2L 2293402 2293631 14 139 18.0 18.0 18.0 0.7 371 chr2L 2293260 intergenic not near genes chr2L 2293446 intergenic not near genes chr2L 2293631 intergenic not near genes chr2L_14_2290001 chr2L_2290001 RAL-301_125b 128 chr2L 2293995 2294044 chr2L 2299250 2299299 copia 16 5242 12.5 6.5 9.5 1.5 5304 chr2L 2293995 intergenic not near genes chr2L 2296647 intergenic not near genes chr2L 2299299 intergenic not near genes chr2L_16_2295001 chr2L_2295001 RAL-301_125b 129 chr2L 2294046 2294063 chr2L 2299246 2299248 copia 8 5230 9.0 5.5 7.2 1.0 5202 chr2L 2294046 intergenic not near genes chr2L 2296647 intergenic not near genes chr2L 2299248 intergenic not near genes chr2L_8_2295001 chr2L_2295001 RAL-301_125b 130 chr2L 2311017 2311091 chr2L 2311169 2311217 14 147 3.5 1.5 2.5 4.0 200 chr2L 2311017 intron CG9967 - chr2L 2311117 intron CG9967 - chr2L 2311217 intron CG9967 - chr2L_14_2310001 chr2L_2310001 RAL-301_125b 131 chr2L 2317071 2317131 chr2L 2317292 2317352 21 221 40.0 45.0 42.5 0.5 281 chr2L 2317071 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317352 intron,intron CG9967 -,eys + chr2L_21_2315001 chr2L_2315001 RAL-301_125b 132 chr2L 2330823 2330854 chr2L 2330962 2330993 11 139 20.0 17.5 18.8 0.6 170 chr2L 2330823 intron,intron CG9967 -,eys + chr2L 2330908 intron,intron CG9967 -,eys + chr2L 2330993 intron,intron CG9967 -,eys + chr2L_11_2330001 chr2L_2330001 RAL-301_125b 133 chr2L 2330865 2330890 chr2L 2331004 2331029 7 139 15.5 20.5 18.0 0.4 164 chr2L 2330865 intron,intron CG9967 -,eys + chr2L 2330947 intron,intron CG9967 -,eys + chr2L 2331029 intron,intron CG9967 -,eys + chr2L_7_2330001 chr2L_2330001 RAL-301_125b 134 chr2L 2348077 2348135 chr2L 2348196 2348265 9 119 11.0 7.5 9.2 0.9 188 chr2L 2348077 intron,intron CG9967 -,eys + chr2L 2348171 intron,intron CG9967 -,eys + chr2L 2348265 intron,intron CG9967 -,eys + chr2L_9_2345001 chr2L_2345001 RAL-301_125b 135 chr2L 2372314 2372370 chr2L 2372450 2372506 22 135 10.0 4.5 7.2 2.7 192 chr2L 2372314 intergenic CG3609 - chr2L 2372410 intergenic CG3609 - chr2L 2372506 3` UTR CG3609 - chr2L_22_2370001 chr2L_2370001 RAL-301_125b 136 chr2L 2396245 2396282 chr2L 2396373 2396410 17 128 8.0 6.0 7.0 2.1 165 chr2L 2396245 intron VGlut + chr2L 2396328 intron VGlut + chr2L 2396410 intron VGlut + chr2L_17_2395001 chr2L_2395001 RAL-301_125b 137 chr2L 2427327 2427391 chr2L 2427463 2427527 16 136 18.5 14.5 16.5 0.9 200 chr2L 2427327 3` UTR CR44912 - chr2L 2427427 3` UTR CR44912 - chr2L 2427527 3` UTR CR44912 - chr2L_16_2425001 chr2L_2425001 RAL-301_125b 138 chr2L 2435292 2435303 chr2L 2435460 2435471 4 168 19.5 12.0 15.8 0.2 179 chr2L 2435292 intron dpp + chr2L 2435382 intron dpp + chr2L 2435471 intron dpp + chr2L_4_2435001 chr2L_2435001 RAL-301_125b 139 chr2L 2465813 2465872 chr2L 2466026 2466085 5 213 33.5 35.5 34.5 0.1 272 chr2L 2465813 intergenic not near genes chr2L 2465949 intergenic not near genes chr2L 2466085 intergenic not near genes chr2L_5_2465001 chr2L_2465001 RAL-301_125b 140 chr2L 2497595 2497615 chr2L 2497721 2497740 5 126 6.0 8.0 7.0 0.6 145 chr2L 2497595 3` UTR oaf + chr2L 2497668 3` UTR oaf + chr2L 2497740 3` UTR oaf + chr2L_5_2495001 chr2L_2495001 RAL-301_125b 141 chr2L 2503674 2503741 chr2L 2504503 2504570 14 828 11.0 25.5 18.2 0.7 896 chr2L 2503674 intergenic not near genes chr2L 2504122 intergenic not near genes chr2L 2504570 intergenic not near genes chr2L_14_2500001 chr2L_2500001 RAL-301_125b 142 chr2L 2508010 2508073 chr2L 2510879 2510942 11 2869 23.5 20.5 22.0 0.5 2932 chr2L 2508010 intergenic CR44607 - chr2L 2509476 intergenic not near genes chr2L 2510942 intergenic not near genes chr2L_11_2505001 chr2L_2505001 RAL-301_125b 143 chr2L 2524982 2525026 chr2L 2525112 2525154 13 124 8.0 10.5 9.2 1.3 172 chr2L 2524982 intergenic not near genes chr2L 2525068 intergenic not near genes chr2L 2525154 intergenic not near genes chr2L_13_2525001 chr2L_2525001 RAL-301_125b 144 chr2L 2541399 2541475 chr2L 2541532 2541608 24 133 26.5 18.5 22.5 1.0 209 chr2L 2541399 intergenic not near genes chr2L 2541504 intergenic not near genes chr2L 2541608 intergenic not near genes chr2L_24_2540001 chr2L_2540001 RAL-301_125b 145 chr2L 2544479 2544549 chr2L 2544633 2544698 19 153 6.5 10.0 8.2 2.1 219 chr2L 2544479 intergenic not near genes chr2L 2544588 intergenic not near genes chr2L 2544698 intergenic not near genes chr2L_19_2540001 chr2L_2540001 RAL-301_125b 146 chr2L 2552700 2552765 chr2L 2552830 2552895 17 130 17.0 17.5 17.2 0.9 195 chr2L 2552700 exon CG3515 - chr2L 2552798 5` UTR CG3515 - chr2L 2552895 intergenic CG3515 - chr2L_17_2550001 chr2L_2550001 RAL-301_125b 147 chr2L 2565494 2565563 chr2L 2571612 2571681 297 23 6115 8.0 8.5 8.2 2.5 6187 chr2L 2565494 exon Cyp309a2 - chr2L 2568588 intron Cyp309a2 - chr2L 2571681 exon Cyp309a2 - chr2L_23_2565001 chr2L_2565001 RAL-301_125b 148 chr2L 2587788 2587833 chr2L 2587895 2587962 15 124 34.5 35.5 35.0 0.4 174 chr2L 2587788 intergenic not near genes chr2L 2587875 intergenic not near genes chr2L 2587962 intergenic not near genes chr2L_15_2585001 chr2L_2585001 RAL-301_125b 149 chr2L 2596021 2596095 chr2L 2596488 2596561 11 467 12.0 17.0 14.5 0.7 540 chr2L 2596021 intergenic not near genes chr2L 2596291 intergenic not near genes chr2L 2596561 intergenic not near genes chr2L_11_2595001 chr2L_2595001 RAL-301_125b 150 chr2L 2653059 2653133 chr2L 2654642 2654706 13 1575 58.0 65.0 61.5 0.2 1647 chr2L 2653059 5` UTR Prosbeta4R1 + chr2L 2653882 3` UTR Prosbeta4R1 + chr2L 2654706 exon Or23a + chr2L_13_2650001 chr2L_2650001 RAL-301_125b 151 chr2L 2661146 2661224 chr2L 2663033 2663097 I-element 13 1866 6.5 3.5 5.0 2.2 1951 chr2L 2661146 intergenic not near genes chr2L 2662122 intergenic not near genes chr2L 2663097 intergenic not near genes chr2L_13_2660001 chr2L_2660001 RAL-301_125b 152 chr2L 2667582 2667653 chr2L 2667710 2667782 21 129 21.5 23.5 22.5 0.9 200 chr2L 2667582 intergenic not near genes chr2L 2667682 intergenic not near genes chr2L 2667782 intergenic not near genes chr2L_21_2665001 chr2L_2665001 RAL-301_125b 153 chr2L 2692289 2692360 chr2L 2692420 2692491 19 129 18.0 17.0 17.5 1.0 202 chr2L 2692289 intron CG31690 + chr2L 2692390 intron CG31690 + chr2L 2692491 intron CG31690 + chr2L_19_2690001 chr2L_2690001 RAL-301_125b 154 chr2L 2698844 2698883 chr2L 2698981 2699020 9 136 9.5 23.0 16.2 0.5 176 chr2L 2698844 intron CG31690 + chr2L 2698932 intron CG31690 + chr2L 2699020 intron CG31690 + chr2L_9_2695001 chr2L_2695001 RAL-301_125b 155 chr2L 2703195 2703437 chr2L 2703315 2703571 39 128 17.5 16.5 17.0 2.2 376 chr2L 2703195 intron CG31690 + chr2L 2703383 intron CG31690 + chr2L 2703571 intron CG31690 + chr2L_39_2700001 chr2L_2700001 RAL-301_125b 156 chr2L 2713478 2713539 chr2L 2713627 2713648 10 143 28.0 27.0 27.5 0.4 170 chr2L 2713478 intron CG31690 + chr2L 2713563 intron CG31690 + chr2L 2713648 intron CG31690 + chr2L_10_2710001 chr2L_2710001 RAL-301_125b 157 chr2L 2719365 2719436 chr2L 2719491 2719562 15 126 40.0 40.0 40.0 0.4 197 chr2L 2719365 3` UTR CG31690 + chr2L 2719464 intergenic CG31690 + chr2L 2719562 intergenic CG31690 + chr2L_15_2715001 chr2L_2715001 RAL-301_125b 158 chr2L 2724364 2724429 chr2L 2724490 2724555 6 126 37.0 35.5 36.2 0.2 191 chr2L 2724364 intergenic not near genes chr2L 2724460 intergenic not near genes chr2L 2724555 intergenic not near genes chr2L_6_2720001 chr2L_2720001 RAL-301_125b 159 chr2L 2725127 2725166 chr2L 2725257 2725296 15 130 22.5 24.0 23.2 0.6 169 chr2L 2725127 intergenic not near genes chr2L 2725212 intergenic CG31689 + chr2L 2725296 intergenic CG31689 + chr2L_15_2725001 chr2L_2725001 RAL-301_125b 160 chr2L 2734458 2734533 chr2L 2734584 2734660 17 126 21.0 20.0 20.5 0.8 202 chr2L 2734458 intron CG31689 + chr2L 2734559 intron CG31689 + chr2L 2734660 intron CG31689 + chr2L_17_2730001 chr2L_2730001 RAL-301_125b 161 chr2L 2739631 2739684 chr2L 2739759 2739807 11 127 33.0 34.0 33.5 0.3 176 chr2L 2739631 3` UTR CG31689 + chr2L 2739719 3` UTR CG31689 + chr2L 2739807 3` UTR CG31689 + chr2L_11_2735001 chr2L_2735001 RAL-301_125b 162 chr2L 2772576 2772613 chr2L 2779210 2779245 297 14 6633 6.5 11.0 8.8 1.4 6669 chr2L 2772576 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779245 3` UTR Syt1 - chr2L_14_2775001 chr2L_2775001 RAL-301_125b 163 chr2L 2800556 2800583 chr2L 2800689 2800716 11 133 15.0 0.0 7.5 1.3 160 chr2L 2800556 intergenic not near genes chr2L 2800636 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_11_2800001 chr2L_2800001 RAL-301_125b 164 chr2L 2826488 2826575 chr2L 2826630 2826710 41 137 4.0 6.0 5.0 6.8 222 chr2L 2826488 intron Duox - chr2L 2826599 intron Duox - chr2L 2826710 intron Duox - chr2L_41_2825001 chr2L_2825001 RAL-301_125b 165 chr2L 2832979 2833057 chr2L 2833919 2833937 14 931 14.0 19.0 16.5 0.8 958 chr2L 2832979 intergenic not near genes chr2L 2833458 intergenic not near genes chr2L 2833937 intergenic not near genes chr2L_14_2830001 chr2L_2830001 RAL-301_125b 166 chr2L 2836692 2836739 chr2L 2836821 2836868 18 129 16.5 13.5 15.0 1.1 176 chr2L 2836692 intron CG3119 - chr2L 2836780 intron CG3119 - chr2L 2836868 intron CG3119 - chr2L_18_2835001 chr2L_2835001 RAL-301_125b 167 chr2L 2860601 2860646 chr2L 2860737 2860781 11 136 18.5 13.0 15.8 0.7 180 chr2L 2860601 intron CG2991 + chr2L 2860691 intron CG2991 + chr2L 2860781 intron CG2991 + chr2L_11_2860001 chr2L_2860001 RAL-301_125b 168 chr2L 2864309 2864358 chr2L 2864606 2864676 5 314 28.5 5.5 17.0 0.3 367 chr2L 2864309 intron CG2991 + chr2L 2864492 intron CG2991 + chr2L 2864676 intron CG2991 + chr2L_5_2860001 chr2L_2860001 RAL-301_125b 169 chr2L 2871623 2871692 chr2L 2871753 2871822 11 130 36.0 34.5 35.2 0.3 199 chr2L 2871623 exon CG31694 - chr2L 2871722 intron CG31694 - chr2L 2871822 intron CG31694 - chr2L_11_2870001 chr2L_2870001 RAL-301_125b 170 chr2L 2874521 2874558 chr2L 2874657 2874694 7 136 21.0 24.0 22.5 0.3 173 chr2L 2874521 intergenic CG31694 -,CG8814 + chr2L 2874608 intergenic CG31694 -,CG8814 + chr2L 2874694 intergenic CG8814 +,CG31694 - chr2L_7_2870001 chr2L_2870001 RAL-301_125b 171 chr2L 2885327 2885393 chr2L 2885454 2885520 15 127 36.5 37.5 37.0 0.4 193 chr2L 2885327 intron NTPase - chr2L 2885424 intron NTPase - chr2L 2885520 intron NTPase - chr2L_15_2885001 chr2L_2885001 RAL-301_125b 172 chr2L 2895584 2895662 chr2L 2895770 2895831 8 184 25.0 15.5 20.2 0.4 247 chr2L 2895584 intron lilli + chr2L 2895708 intron lilli + chr2L 2895831 intron lilli + chr2L_8_2895001 chr2L_2895001 RAL-301_125b 173 chr2L 2899932 2899949 chr2L 2900128 2900145 6 196 30.5 22.5 26.5 0.2 213 chr2L 2899932 intron lilli + chr2L 2900038 intron lilli + chr2L 2900145 intron lilli + chr2L_6_2900001 chr2L_2900001 RAL-301_125b 174 chr2L 2899952 2899995 chr2L 2900123 2900191 19 194 19.5 22.0 20.8 0.9 239 chr2L 2899952 intron lilli + chr2L 2900072 intron lilli + chr2L 2900191 intron lilli + chr2L_19_2900001 chr2L_2900001 RAL-301_125b 175 chr2L 2923046 2923096 chr2L 2923152 2923197 19 122 16.5 13.0 14.8 1.2 151 chr2L 2923046 intron lilli + chr2L 2923122 intron lilli + chr2L 2923197 intron lilli + chr2L_19_2920001 chr2L_2920001 RAL-301_125b 176 chr2L 2925639 2925705 chr2L 2925780 2925846 19 140 9.5 5.0 7.2 2.3 207 chr2L 2925639 intron lilli + chr2L 2925742 intron lilli + chr2L 2925846 intron lilli + chr2L_19_2925001 chr2L_2925001 RAL-301_125b 177 chr2L 2933256 2933324 chr2L 2935483 2935529 pogo 23 2224 6.5 8.0 7.2 2.8 2273 chr2L 2933256 intron lilli + chr2L 2934392 intron lilli + chr2L 2935529 intron lilli + chr2L_23_2930001 chr2L_2930001 RAL-301_125b 178 chr2L 2937378 2937440 chr2L 2937505 2937551 20 126 8.0 3.5 5.8 2.9 173 chr2L 2937378 intron lilli + chr2L 2937464 intron lilli + chr2L 2937551 intron lilli + chr2L_20_2935001 chr2L_2935001 RAL-301_125b 179 chr2L 2943262 2943286 chr2L 2943403 2943404 7 144 11.0 30.0 20.5 0.3 142 chr2L 2943262 intron lilli + chr2L 2943333 intron lilli + chr2L 2943404 intron lilli + chr2L_7_2940001 chr2L_2940001 RAL-301_125b 180 chr2L 2964575 2964627 chr2L 2964714 2964766 12 138 23.5 23.0 23.2 0.5 191 chr2L 2964575 3` UTR Rbp9 + chr2L 2964670 3` UTR Rbp9 + chr2L 2964766 3` UTR Rbp9 + chr2L_12_2960001 chr2L_2960001 RAL-301_125b 181 chr2L 2979359 2979371 chr2L 2979496 2979508 7 137 15.5 24.0 19.8 0.3 149 chr2L 2979359 intergenic CG9643 -,Chd1 - chr2L 2979434 intergenic Chd1 -,CG9643 - chr2L 2979508 intergenic Chd1 -,CG9643 - chr2L_7_2975001 chr2L_2975001 RAL-301_125b 182 chr2L 3011894 3011939 chr2L 3018063 3018108 10 6171 44.5 57.5 51.0 0.2 6214 chr2L 3011894 intron CG17265 + chr2L 3015001 exon CG17265 + chr2L 3018108 intron CG17224 - chr2L_10_3015001 chr2L_3015001 RAL-301_125b 183 chr2L 3046416 3046428 chr2L 3046621 3046633 9 205 15.0 15.0 15.0 0.6 217 chr2L 3046416 intron v(2)k05816 + chr2L 3046524 intron v(2)k05816 + chr2L 3046633 intron v(2)k05816 + chr2L_9_3045001 chr2L_3045001 RAL-301_125b 184 chr2L 3049195 3049257 chr2L 3049331 3049393 24 136 20.0 26.0 23.0 1.0 198 chr2L 3049195 intron v(2)k05816 + chr2L 3049294 intron v(2)k05816 + chr2L 3049393 exon v(2)k05816 + chr2L_24_3045001 chr2L_3045001 RAL-301_125b 185 chr2L 3072993 3073059 chr2L 3078233 3078312 copia 34 5249 5.5 6.5 6.0 4.9 5319 chr2L 3072993 intron toc - chr2L 3075652 intron toc - chr2L 3078312 intron toc - chr2L_34_3075001 chr2L_3075001 RAL-301_125b 186 chr2L 3079198 3079238 chr2L 3079327 3079367 14 129 4.0 4.0 4.0 2.8 169 chr2L 3079198 intron toc - chr2L 3079282 intron toc - chr2L 3079367 intron toc - chr2L_14_3075001 chr2L_3075001 RAL-301_125b 187 chr2L 3082212 3082272 chr2L 3082341 3082401 16 129 6.5 10.0 8.2 1.7 189 chr2L 3082212 intron toc - chr2L 3082306 intron toc - chr2L 3082401 intron toc - chr2L_16_3080001 chr2L_3080001 RAL-301_125b 188 chr2L 3100101 3100176 chr2L 3100240 3100315 21 139 17.0 16.5 16.8 1.2 214 chr2L 3100101 intron toc - chr2L 3100208 intron toc - chr2L 3100315 intron toc - chr2L_21_3100001 chr2L_3100001 RAL-301_125b 189 chr2L 3107461 3107512 chr2L 3107612 3107663 15 150 12.5 17.0 14.8 0.9 202 chr2L 3107461 intron toc - chr2L 3107562 intron toc - chr2L 3107663 intron toc - chr2L_15_3105001 chr2L_3105001 RAL-301_125b 190 chr2L 3108833 3108894 chr2L 3108960 3109021 7 127 27.5 33.5 30.5 0.2 188 chr2L 3108833 exon toc - chr2L 3108927 intron toc - chr2L 3109021 intron toc - chr2L_7_3105001 chr2L_3105001 RAL-301_125b 191 chr2L 3134249 3134283 chr2L 3134375 3134409 7 126 21.0 12.0 16.5 0.4 160 chr2L 3134249 intron toc - chr2L 3134329 intron toc - chr2L 3134409 intron toc - chr2L_7_3130001 chr2L_3130001 RAL-301_125b 192 chr2L 3138771 3138800 chr2L 3138901 3138930 12 130 20.0 23.5 21.8 0.5 159 chr2L 3138771 intron toc - chr2L 3138850 intron toc - chr2L 3138930 intron toc - chr2L_12_3135001 chr2L_3135001 RAL-301_125b 193 chr2L 3147249 3147305 chr2L 3147355 3147420 16 122 24.0 21.0 22.5 0.7 171 chr2L 3147249 3` UTR Mad - chr2L 3147334 3` UTR Mad - chr2L 3147420 exon Mad - chr2L_16_3145001 chr2L_3145001 RAL-301_125b 194 chr2L 3156507 3156552 chr2L 3156654 3156699 8 147 18.0 35.0 26.5 0.3 192 chr2L 3156507 intron Mad - chr2L 3156603 intron Mad - chr2L 3156699 intron Mad - chr2L_8_3155001 chr2L_3155001 RAL-301_125b 195 chr2L 3181245 3181305 chr2L 3181381 3181441 16 136 11.0 10.0 10.5 1.4 196 chr2L 3181245 intron CG34393 - chr2L 3181343 intron CG34393 - chr2L 3181441 intron CG34393 - chr2L_16_3180001 chr2L_3180001 RAL-301_125b 196 chr2L 3185048 3185067 chr2L 3185174 3185193 4 126 9.0 12.5 10.8 0.3 145 chr2L 3185048 exon CG34393 - chr2L 3185120 intron CG34393 - chr2L 3185193 intron CG34393 - chr2L_4_3185001 chr2L_3185001 RAL-301_125b 197 chr2L 3189740 3189788 chr2L 3189875 3189923 12 135 18.0 11.0 14.5 0.8 183 chr2L 3189740 intron CG34393 - chr2L 3189832 intron CG34393 - chr2L 3189923 intron CG34393 - chr2L_12_3185001 chr2L_3185001 RAL-301_125b 198 chr2L 3192162 3192240 chr2L 3192323 3192401 26 160 11.5 12.5 12.0 2.0 239 chr2L 3192162 exon CG34393 - chr2L 3192282 intron CG34393 - chr2L 3192401 intron CG34393 - chr2L_26_3190001 chr2L_3190001 RAL-301_125b 199 chr2L 3201081 3201140 chr2L 3201214 3201273 31 131 21.5 22.0 21.8 1.4 192 chr2L 3201081 intergenic not near genes chr2L 3201177 intergenic not near genes chr2L 3201273 intergenic not near genes chr2L_31_3200001 chr2L_3200001 RAL-301_125b 200 chr2L 3202702 3202755 chr2L 3210179 3210233 mdg1 7 7479 3.0 2.5 2.8 1.8 7531 chr2L 3202702 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210233 intergenic CR45336 + chr2L_7_3205001 chr2L_3205001 RAL-301_125b 201 chr2L 3233585 3233660 chr2L 3233786 3233861 10 200 14.0 19.5 16.8 0.6 276 chr2L 3233585 intergenic not near genes chr2L 3233723 intergenic not near genes chr2L 3233861 intergenic not near genes chr2L_10_3230001 chr2L_3230001 RAL-301_125b 202 chr2L 3251467 3251510 chr2L 3259082 3259125 springer 13 7622 9.5 9.5 9.5 1.2 7658 chr2L 3251467 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259125 intergenic not near genes chr2L_13_3255001 chr2L_3255001 RAL-301_125b 203 chr2L 3261467 3261482 chr2L 3261609 3261624 6 142 26.5 29.0 27.8 0.2 157 chr2L 3261467 intergenic CR45338 -,CR45337 - chr2L 3261546 intergenic CR45338 -,CR45337 - chr2L 3261624 intergenic CR45338 -,CR45337 - chr2L_6_3260001 chr2L_3260001 RAL-301_125b 204 chr2L 3267568 3267602 chr2L 3267702 3267743 16 139 8.5 9.5 9.0 1.6 175 chr2L 3267568 intergenic not near genes chr2L 3267656 intergenic not near genes chr2L 3267743 intergenic not near genes chr2L_16_3265001 chr2L_3265001 RAL-301_125b 205 chr2L 3271115 3271177 chr2L 3271287 3271349 27 171 8.5 15.0 11.8 2.1 234 chr2L 3271115 exon CG3347 + chr2L 3271232 exon CG3347 + chr2L 3271349 exon CG3347 + chr2L_27_3270001 chr2L_3270001 RAL-301_125b 206 chr2L 3272921 3273049 chr2L 3273047 3273185 6 143 23.0 22.5 22.8 0.3 264 chr2L 3272921 intergenic not near genes chr2L 3273053 intergenic not near genes chr2L 3273185 intergenic not near genes chr2L_6_3270001 chr2L_3270001 RAL-301_125b 207 chr2L 3291214 3291259 chr2L 3291329 3291389 23 126 11.0 14.0 12.5 1.7 175 chr2L 3291214 intergenic CG9664 - chr2L 3291302 3` UTR CG9664 - chr2L 3291389 3` UTR CG9664 - chr2L_23_3290001 chr2L_3290001 RAL-301_125b 208 chr2L 3314502 3314571 chr2L 3314633 3314702 33 131 26.0 24.5 25.2 1.3 200 chr2L 3314502 intron CG3277 + chr2L 3314602 intron CG3277 + chr2L 3314702 intron CG3277 + chr2L_33_3310001 chr2L_3310001 RAL-301_125b 209 chr2L 3319304 3319334 chr2L 3319437 3319461 6 130 22.0 17.0 19.5 0.3 157 chr2L 3319304 exon CG3326 - chr2L 3319382 exon CG3326 - chr2L 3319461 exon CG3326 - chr2L_6_3315001 chr2L_3315001 RAL-301_125b 210 chr2L 3319336 3319344 chr2L 3319435 3319461 4 110 20.5 17.0 18.8 0.2 125 chr2L 3319336 exon CG3326 - chr2L 3319398 exon CG3326 - chr2L 3319461 exon CG3326 - chr2L_4_3315001 chr2L_3315001 RAL-301_125b 211 chr2L 3319345 3319362 chr2L 3319431 3319489 5 110 14.5 17.5 16.0 0.3 144 chr2L 3319345 exon CG3326 - chr2L 3319417 exon CG3326 - chr2L 3319489 exon CG3326 - chr2L_5_3315001 chr2L_3315001 RAL-301_125b 212 chr2L 3323211 3323283 chr2L 3323368 3323420 14 153 25.5 29.5 27.5 0.5 209 chr2L 3323211 intergenic CG8837 + chr2L 3323316 intergenic CG8837 + chr2L 3323420 intergenic CG8837 + chr2L_14_3320001 chr2L_3320001 RAL-301_125b 213 chr2L 3330090 3330175 chr2L 3330248 3330324 7 155 13.0 19.5 16.2 0.4 234 chr2L 3330090 intergenic CG33282 + chr2L 3330207 intergenic CG33282 + chr2L 3330324 intergenic not near genes chr2L_7_3330001 chr2L_3330001 RAL-301_125b 214 chr2L 3366514 3366560 chr2L 3366646 3366677 8 128 28.5 20.0 24.2 0.3 163 chr2L 3366514 intron CG34394 - chr2L 3366596 intron CG34394 - chr2L 3366677 intron CG34394 - chr2L_8_3365001 chr2L_3365001 RAL-301_125b 215 chr2L 3366965 3367041 chr2L 3367165 3367234 17 200 21.0 15.5 18.2 0.9 269 chr2L 3366965 intron CG34394 - chr2L 3367100 intron CG34394 - chr2L 3367234 intron CG34394 - chr2L_17_3365001 chr2L_3365001 RAL-301_125b 216 chr2L 3388556 3388623 chr2L 3388847 3388914 pogo 40 291 11.0 9.5 10.2 3.6 358 chr2L 3388556 intergenic CG42460 - chr2L 3388735 intergenic CG42460 - chr2L 3388914 intergenic CG42460 -,CR44791 + chr2L_40_3385001 chr2L_3385001 RAL-301_125b 217 chr2L 3426366 3426436 chr2L 3426529 3426599 30 162 17.5 21.0 19.2 1.5 233 chr2L 3426366 intron pgant2 - chr2L 3426482 intron pgant2 - chr2L 3426599 5` UTR pgant2 - chr2L_30_3425001 chr2L_3425001 RAL-301_125b 218 chr2L 3437126 3437159 chr2L 3437259 3437292 4 133 12.0 9.5 10.8 0.3 166 chr2L 3437126 intergenic not near genes chr2L 3437209 intergenic not near genes chr2L 3437292 intergenic not near genes chr2L_4_3435001 chr2L_3435001 RAL-301_125b 219 chr2L 3439372 3439453 chr2L 3439509 3439590 13 134 15.0 15.0 15.0 0.8 218 chr2L 3439372 intergenic not near genes chr2L 3439481 intergenic not near genes chr2L 3439590 intergenic not near genes chr2L_13_3435001 chr2L_3435001 RAL-301_125b 220 chr2L 3467480 3467558 chr2L 3467635 3467729 24 168 19.0 14.0 16.5 1.4 249 chr2L 3467480 3` UTR CG3238 - chr2L 3467604 3` UTR CG3238 - chr2L 3467729 3` UTR CG3238 - chr2L_24_3465001 chr2L_3465001 RAL-301_125b 221 chr2L 3480445 3480485 chr2L 3480574 3480614 6 129 12.5 6.5 9.5 0.6 169 chr2L 3480445 intergenic CG15414 - chr2L 3480530 intergenic CG15414 - chr2L 3480614 intergenic CG15414 - chr2L_6_3480001 chr2L_3480001 RAL-301_125b 222 chr2L 3487939 3487988 chr2L 3488442 3488491 4 503 28.5 28.5 28.5 0.1 552 chr2L 3487939 intron CG15414 - chr2L 3488215 intron CG15414 - chr2L 3488491 intron CG15414 - chr2L_4_3485001 chr2L_3485001 RAL-301_125b 223 chr2L 3498670 3498746 chr2L 3498797 3498873 29 127 24.5 22.0 23.2 1.2 203 chr2L 3498670 intron tim - chr2L 3498772 intron tim - chr2L 3498873 intron tim - chr2L_29_3495001 chr2L_3495001 RAL-301_125b 224 chr2L 3508298 3508373 chr2L 3508426 3508501 24 128 18.5 20.0 19.2 1.2 203 chr2L 3508298 intergenic tim -,CR45299 + chr2L 3508400 intergenic CR45299 +,tim - chr2L 3508501 intergenic CR45299 +,tim - chr2L_24_3505001 chr2L_3505001 RAL-301_125b 225 chr2L 3522982 3523054 chr2L 3523145 3523215 22 162 11.0 8.0 9.5 2.1 233 chr2L 3522982 exon Sr-CIV - chr2L 3523098 intron Sr-CIV - chr2L 3523215 exon Sr-CIV - chr2L_22_3520001 chr2L_3520001 RAL-301_125b 226 chr2L 3535424 3535500 chr2L 3535554 3535630 13 130 17.0 20.5 18.8 0.7 206 chr2L 3535424 intergenic not near genes chr2L 3535527 intergenic not near genes chr2L 3535630 intergenic not near genes chr2L_13_3535001 chr2L_3535001 RAL-301_125b 227 chr2L 3569951 3569963 chr2L 3570108 3570120 6 157 15.5 17.5 16.5 0.3 169 chr2L 3569951 intergenic not near genes chr2L 3570036 intergenic not near genes chr2L 3570120 intergenic not near genes chr2L_6_3570001 chr2L_3570001 RAL-301_125b 228 chr2L 3584647 3584683 chr2L 3584774 3584810 10 126 21.0 20.5 20.8 0.5 163 chr2L 3584647 intergenic not near genes chr2L 3584728 intergenic not near genes chr2L 3584810 intergenic not near genes chr2L_10_3580001 chr2L_3580001 RAL-301_125b 229 chr2L 3602129 3602177 chr2L 3602271 3602319 13 142 36.0 33.5 34.8 0.4 190 chr2L 3602129 intergenic not near genes chr2L 3602224 intergenic not near genes chr2L 3602319 intergenic not near genes chr2L_13_3600001 chr2L_3600001 RAL-301_125b 230 chr2L 3632240 3632275 chr2L 3632367 3632402 17 126 14.0 32.5 23.2 0.7 162 chr2L 3632240 intron for - chr2L 3632321 intron for - chr2L 3632402 intron for - chr2L_17_3630001 chr2L_3630001 RAL-301_125b 231 chr2L 3648135 3648203 chr2L 3648264 3648331 24 128 10.0 5.5 7.8 2.7 196 chr2L 3648135 intron for - chr2L 3648233 intron for - chr2L 3648331 intron for - chr2L_24_3645001 chr2L_3645001 RAL-301_125b 232 chr2L 3649737 3649802 chr2L 3654994 3655054 copia 22 5253 3.0 7.5 5.2 3.5 5317 chr2L 3649737 intron for - chr2L 3652396 intron for - chr2L 3655054 intron for - chr2L_22_3650001 chr2L_3650001 RAL-301_125b 233 chr2L 3659721 3659774 chr2L 3659861 3659914 10 140 19.0 21.0 20.0 0.5 193 chr2L 3659721 intergenic not near genes chr2L 3659818 intergenic not near genes chr2L 3659914 intergenic not near genes chr2L_10_3655001 chr2L_3655001 RAL-301_125b 234 chr2L 3663270 3663329 chr2L 3663399 3663458 23 129 24.5 17.0 20.8 1.1 188 chr2L 3663270 5` UTR CG34340 + chr2L 3663364 intron CG34340 + chr2L 3663458 intron CG34340 + chr2L_23_3660001 chr2L_3660001 RAL-301_125b 235 chr2L 3667919 3668062 chr2L 3668050 3668188 13 139 16.0 14.5 15.2 0.8 269 chr2L 3667919 intron CG34340 + chr2L 3668054 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668188 intron,exon CG34340 +,Sfp24Ba - chr2L_13_3665001 chr2L_3665001 RAL-301_125b 236 chr2L 3677868 3677930 chr2L 3678014 3678079 4 148 5.0 15.5 10.2 0.4 211 chr2L 3677868 intron CG34340 + chr2L 3677974 intron CG34340 + chr2L 3678079 intron CG34340 + chr2L_4_3675001 chr2L_3675001 RAL-301_125b 237 chr2L 3685978 3686057 chr2L 3686116 3686195 21 136 2.0 6.0 4.0 4.2 217 chr2L 3685978 intron CG34340 + chr2L 3686086 intron CG34340 + chr2L 3686195 intron CG34340 + chr2L_21_3685001 chr2L_3685001 RAL-301_125b 238 chr2L 3688285 3688311 chr2L 3688418 3688444 4 133 19.5 9.0 14.2 0.3 159 chr2L 3688285 intron CG34340 + chr2L 3688364 intron CG34340 + chr2L 3688444 intron CG34340 + chr2L_4_3685001 chr2L_3685001 RAL-301_125b 239 chr2L 3690060 3690112 chr2L 3690198 3690250 15 137 16.0 17.5 16.8 0.8 190 chr2L 3690060 intron CG34340 + chr2L 3690155 intron CG34340 + chr2L 3690250 intron CG34340 + chr2L_15_3690001 chr2L_3690001 RAL-301_125b 240 chr2L 3707519 3707570 chr2L 3707653 3707704 9 132 15.5 12.5 14.0 0.6 185 chr2L 3707519 exon cutlet - chr2L 3707612 intron cutlet - chr2L 3707704 intron cutlet - chr2L_9_3705001 chr2L_3705001 RAL-301_125b 241 chr2L 3735780 3735817 chr2L 3736038 3736075 15 258 19.0 20.0 19.5 0.7 295 chr2L 3735780 intron CG10019 + chr2L 3735928 intron CG10019 + chr2L 3736075 intron CG10019 + chr2L_15_3735001 chr2L_3735001 RAL-301_125b 242 chr2L 3787603 3787666 chr2L 3787743 3787795 6 131 14.0 5.5 9.8 0.6 192 chr2L 3787603 intron CG3921 + chr2L 3787699 intron CG3921 + chr2L 3787795 intron CG3921 + chr2L_6_3785001 chr2L_3785001 RAL-301_125b 243 chr2L 3788359 3788387 chr2L 3788505 3788533 5 146 20.5 14.5 17.5 0.3 174 chr2L 3788359 intron CG3921 + chr2L 3788446 intron CG3921 + chr2L 3788533 intron CG3921 + chr2L_5_3785001 chr2L_3785001 RAL-301_125b 244 chr2L 3792439 3792494 chr2L 3792581 3792636 11 142 16.5 24.0 20.2 0.5 197 chr2L 3792439 intron CG3921 + chr2L 3792538 intron CG3921 + chr2L 3792636 exon CG3921 + chr2L_11_3790001 chr2L_3790001 RAL-301_125b 245 chr2L 3814573 3814641 chr2L 3814703 3814771 10 130 22.0 18.0 20.0 0.5 198 chr2L 3814573 intergenic not near genes chr2L 3814672 intergenic not near genes chr2L 3814771 intergenic not near genes chr2L_10_3810001 chr2L_3810001 RAL-301_125b 246 chr2L 3819574 3819629 chr2L 3819700 3819755 12 126 23.0 24.0 23.5 0.5 181 chr2L 3819574 intergenic not near genes chr2L 3819664 intergenic not near genes chr2L 3819755 intergenic not near genes chr2L_12_3815001 chr2L_3815001 RAL-301_125b 247 chr2L 3824486 3824512 chr2L 3824612 3824638 9 126 6.5 12.0 9.2 0.9 152 chr2L 3824486 intergenic not near genes chr2L 3824562 intergenic not near genes chr2L 3824638 intergenic not near genes chr2L_9_3820001 chr2L_3820001 RAL-301_125b 248 chr2L 3831815 3831862 chr2L 3831946 3831993 10 131 32.5 33.0 32.8 0.3 178 chr2L 3831815 intergenic not near genes chr2L 3831904 intergenic not near genes chr2L 3831993 intergenic not near genes chr2L_10_3830001 chr2L_3830001 RAL-301_125b 249 chr2L 3850353 3850404 chr2L 3850467 3850532 20 130 11.0 11.0 11.0 1.7 179 chr2L 3850353 intergenic not near genes chr2L 3850442 intergenic not near genes chr2L 3850532 intergenic not near genes chr2L_20_3850001 chr2L_3850001 RAL-301_125b 250 chr2L 3862379 3862389 chr2L 3862513 3862523 5 134 5.5 0.0 2.8 1.3 144 chr2L 3862379 intergenic CR44078 -,CG3964 + chr2L 3862451 intergenic CG3964 +,CR44078 - chr2L 3862523 intergenic CG3964 +,CR44078 - chr2L_5_3860001 chr2L_3860001 RAL-301_125b 251 chr2L 3881728 3881790 chr2L 3881864 3881926 17 136 18.0 19.0 18.5 0.9 198 chr2L 3881728 intron capu - chr2L 3881827 intron capu - chr2L 3881926 intron capu - chr2L_17_3880001 chr2L_3880001 RAL-301_125b 252 chr2L 3883759 3883771 chr2L 3883886 3883898 7 127 19.5 7.5 13.5 0.5 139 chr2L 3883759 intron capu - chr2L 3883828 intron capu - chr2L 3883898 intron capu - chr2L_7_3880001 chr2L_3880001 RAL-301_125b 253 chr2L 3891550 3891596 chr2L 3891680 3891726 7 130 20.0 36.5 28.2 0.2 176 chr2L 3891550 intron capu - chr2L 3891638 intron capu - chr2L 3891726 intron capu - chr2L_7_3890001 chr2L_3890001 RAL-301_125b 254 chr2L 3895283 3895358 chr2L 3895422 3895497 21 137 9.0 14.5 11.8 1.6 214 chr2L 3895283 intron capu - chr2L 3895390 intron capu - chr2L 3895497 intron capu - chr2L_21_3895001 chr2L_3895001 RAL-301_125b 255 chr2L 3896278 3896321 chr2L 3896407 3896450 4 129 17.5 15.5 16.5 0.2 172 chr2L 3896278 intron capu - chr2L 3896364 intron capu - chr2L 3896450 intron capu - chr2L_4_3895001 chr2L_3895001 RAL-301_125b 256 chr2L 3898219 3898303 chr2L 3898354 3898424 9 132 9.5 15.5 12.5 0.7 205 chr2L 3898219 intron capu - chr2L 3898322 intron capu - chr2L 3898424 intron capu - chr2L_9_3895001 chr2L_3895001 RAL-301_125b 257 chr2L 3909183 3909203 chr2L 3909749 3909769 5 566 18.5 19.0 18.8 0.3 586 chr2L 3909183 intron fred - chr2L 3909476 intron fred - chr2L 3909769 intron fred - chr2L_5_3905001 chr2L_3905001 RAL-301_125b 258 chr2L 3929079 3929125 chr2L 3929214 3929260 15 134 20.0 18.5 19.2 0.7 181 chr2L 3929079 intron fred - chr2L 3929170 intron fred - chr2L 3929260 intron fred - chr2L_15_3925001 chr2L_3925001 RAL-301_125b 259 chr2L 3931835 3931844 chr2L 3931995 3932015 6 170 23.0 25.0 24.0 0.2 180 chr2L 3931835 intron fred - chr2L 3931925 intron fred - chr2L 3932015 intron fred - chr2L_6_3930001 chr2L_3930001 RAL-301_125b 260 chr2L 3935868 3935940 chr2L 3936007 3936079 32 138 21.5 22.5 22.0 1.4 211 chr2L 3935868 intron fred - chr2L 3935974 intron fred - chr2L 3936079 intron fred - chr2L_32_3935001 chr2L_3935001 RAL-301_125b 261 chr2L 3936577 3936651 chr2L 3936705 3936781 11 130 13.0 16.0 14.5 0.7 204 chr2L 3936577 intron fred - chr2L 3936679 intron fred - chr2L 3936781 intron fred - chr2L_11_3935001 chr2L_3935001 RAL-301_125b 262 chr2L 3943767 3943819 chr2L 3943908 3943960 10 141 14.0 19.5 16.8 0.6 193 chr2L 3943767 intron fred - chr2L 3943864 intron fred - chr2L 3943960 intron fred - chr2L_10_3940001 chr2L_3940001 RAL-301_125b 263 chr2L 3967180 3967252 chr2L 3967318 3967390 21 138 15.0 21.5 18.2 1.1 210 chr2L 3967180 intron fred - chr2L 3967285 intron fred - chr2L 3967390 intron fred - chr2L_21_3965001 chr2L_3965001 RAL-301_125b 264 chr2L 3985929 3985966 chr2L 3986057 3986094 13 127 19.0 22.0 20.5 0.6 165 chr2L 3985929 intron fred - chr2L 3986012 intron fred - chr2L 3986094 intron fred - chr2L_13_3985001 chr2L_3985001 RAL-301_125b 265 chr2L 3992448 3992525 chr2L 3992667 3992745 12 219 11.5 6.0 8.8 1.2 297 chr2L 3992448 intergenic not near genes chr2L 3992596 intergenic not near genes chr2L 3992745 intergenic not near genes chr2L_12_3990001 chr2L_3990001 RAL-301_125b 266 chr2L 3997501 3997575 chr2L 3997642 3997708 11 139 5.5 12.0 8.8 1.1 207 chr2L 3997501 intergenic not near genes chr2L 3997604 intergenic not near genes chr2L 3997708 intergenic not near genes chr2L_11_3995001 chr2L_3995001 RAL-301_125b 267 chr2L 4001610 4001684 chr2L 4001759 4001832 16 148 18.0 19.5 18.8 0.8 222 chr2L 4001610 5` UTR CR45344 + chr2L 4001721 intergenic CR45344 + chr2L 4001832 intergenic CR45344 + chr2L_16_4000001 chr2L_4000001 RAL-301_125b 268 chr2L 4004446 4004453 chr2L 4004572 4004579 6 126 6.5 5.0 5.8 0.9 133 chr2L 4004446 3` UTR CG34176 + chr2L 4004512 intergenic CG34176 +,CG15422 + chr2L 4004579 intergenic CG34176 +,CG15422 + chr2L_6_4000001 chr2L_4000001 RAL-301_125b 269 chr2L 4007256 4007293 chr2L 4007397 4007434 7 139 16.0 11.0 13.5 0.5 178 chr2L 4007256 intergenic CG43773 + chr2L 4007345 intergenic CG43773 + chr2L 4007434 intergenic CG43773 + chr2L_7_4005001 chr2L_4005001 RAL-301_125b 270 chr2L 4008221 4008299 chr2L 4008356 4008434 19 134 8.5 10.0 9.2 1.9 213 chr2L 4008221 intergenic CG43773 +,CG43774 + chr2L 4008328 intergenic CG43774 +,CG43773 + chr2L 4008434 intergenic CG43774 +,CG43773 + chr2L_19_4005001 chr2L_4005001 RAL-301_125b 271 chr2L 4020009 4020023 chr2L 4020135 4020149 4 126 20.5 27.0 23.8 0.2 140 chr2L 4020009 intergenic not near genes chr2L 4020079 intergenic not near genes chr2L 4020149 intergenic not near genes chr2L_4_4020001 chr2L_4020001 RAL-301_125b 272 chr2L 4027664 4027693 chr2L 4027785 4027808 5 123 4.0 7.5 5.8 0.7 144 chr2L 4027664 intergenic not near genes chr2L 4027736 intergenic not near genes chr2L 4027808 intergenic not near genes chr2L_5_4025001 chr2L_4025001 RAL-301_125b 273 chr2L 4037754 4037809 chr2L 4037891 4037946 21 137 8.0 6.5 7.2 2.6 192 chr2L 4037754 intron ed + chr2L 4037850 intron ed + chr2L 4037946 intron ed + chr2L_21_4035001 chr2L_4035001 RAL-301_125b 274 chr2L 4060118 4060192 chr2L 4060244 4060318 15 126 17.0 15.0 16.0 0.9 200 chr2L 4060118 intron ed + chr2L 4060218 intron ed + chr2L 4060318 intron ed + chr2L_15_4060001 chr2L_4060001 RAL-301_125b 275 chr2L 4062950 4063005 chr2L 4063105 4063153 16 150 12.5 9.5 11.0 1.3 203 chr2L 4062950 intron ed + chr2L 4063052 intron ed + chr2L 4063153 intron ed + chr2L_16_4060001 chr2L_4060001 RAL-301_125b 276 chr2L 4066003 4066067 chr2L 4068878 4068930 Juan 25 2871 8.5 16.5 12.5 1.9 2927 chr2L 4066003 intron ed + chr2L 4067466 intron ed + chr2L 4068930 intron ed + chr2L_25_4065001 chr2L_4065001 RAL-301_125b 277 chr2L 4074131 4074210 chr2L 4074274 4074353 12 142 27.0 24.0 25.5 0.5 222 chr2L 4074131 intron ed + chr2L 4074242 intron ed + chr2L 4074353 intron,3` UTR ed +,CR44984 - chr2L_12_4070001 chr2L_4070001 RAL-301_125b 278 chr2L 4119918 4119970 chr2L 4120055 4120107 15 137 19.0 16.0 17.5 0.8 189 chr2L 4119918 intergenic Sr-CIII + chr2L 4120012 intergenic Sr-CIII + chr2L 4120107 intergenic Sr-CIII + chr2L_15_4120001 chr2L_4120001 RAL-301_125b 279 chr2L 4124232 4124311 chr2L 4124362 4124481 18 166 18.0 14.5 16.2 1.0 249 chr2L 4124232 intergenic Sr-CI + chr2L 4124356 intergenic Sr-CI + chr2L 4124481 intergenic Sr-CI + chr2L_18_4120001 chr2L_4120001 RAL-301_125b 280 chr2L 4131025 4131083 chr2L 4131454 4131532 18 447 6.5 12.0 9.2 1.8 507 chr2L 4131025 intergenic not near genes chr2L 4131278 intergenic not near genes chr2L 4131532 intergenic not near genes chr2L_18_4130001 chr2L_4130001 RAL-301_125b 281 chr2L 4138096 4138163 chr2L 4138221 4138277 18 124 18.5 13.5 16.0 1.1 181 chr2L 4138096 intergenic not near genes chr2L 4138186 intergenic not near genes chr2L 4138277 intergenic not near genes chr2L_18_4135001 chr2L_4135001 RAL-301_125b 282 chr2L 4150603 4150646 chr2L 4150733 4150753 12 128 13.5 20.5 17.0 0.7 150 chr2L 4150603 exon CG2955 + chr2L 4150678 exon CG2955 + chr2L 4150753 exon CG2955 + chr2L_12_4150001 chr2L_4150001 RAL-301_125b 283 chr2L 4156495 4156542 chr2L 4156740 4156787 5 245 1.0 17.5 9.2 0.5 292 chr2L 4156495 intergenic not near genes chr2L 4156641 intergenic not near genes chr2L 4156787 intergenic not near genes chr2L_5_4155001 chr2L_4155001 RAL-301_125b 284 chr2L 4166332 4166408 chr2L 4166465 4166541 31 132 11.0 9.5 10.2 2.8 209 chr2L 4166332 intergenic Or24a - chr2L 4166436 intergenic Or24a - chr2L 4166541 intergenic Or24a - chr2L_31_4165001 chr2L_4165001 RAL-301_125b 285 chr2L 4170892 4170956 chr2L 4171111 4171175 16 218 13.5 21.5 17.5 0.9 283 chr2L 4170892 intergenic not near genes chr2L 4171034 intergenic not near genes chr2L 4171175 intergenic not near genes chr2L_16_4170001 chr2L_4170001 RAL-301_125b 286 chr2L 4180077 4180130 chr2L 4180203 4180256 13 126 7.0 11.0 9.0 1.3 179 chr2L 4180077 intergenic not near genes chr2L 4180166 intergenic not near genes chr2L 4180256 intergenic not near genes chr2L_13_4180001 chr2L_4180001 RAL-301_125b 287 chr2L 4184422 4184508 chr2L 4184791 4184832 26 367 6.0 7.0 6.5 3.5 410 chr2L 4184422 intergenic not near genes chr2L 4184627 intergenic not near genes chr2L 4184832 intergenic not near genes chr2L_26_4180001 chr2L_4180001 RAL-301_125b 288 chr2L 4218310 4218331 chr2L 4218438 4218459 9 127 8.5 15.5 12.0 0.7 149 chr2L 4218310 intron ft - chr2L 4218384 intron ft - chr2L 4218459 intron ft - chr2L_9_4215001 chr2L_4215001 RAL-301_125b 289 chr2L 4222142 4222211 chr2L 4222279 4222348 25 137 12.0 21.5 16.8 1.4 206 chr2L 4222142 intergenic ft - chr2L 4222245 intergenic ft - chr2L 4222348 intergenic not near genes chr2L_25_4220001 chr2L_4220001 RAL-301_125b 290 chr2L 4242557 4242622 chr2L 4242685 4242751 30 128 20.5 17.5 19.0 1.5 194 chr2L 4242557 intergenic CR44058 + chr2L 4242654 intergenic CR44058 + chr2L 4242751 intergenic CR44058 + chr2L_30_4240001 chr2L_4240001 RAL-301_125b 291 chr2L 4265459 4265497 chr2L 4265595 4265633 12 136 32.0 32.0 32.0 0.4 174 chr2L 4265459 intergenic not near genes chr2L 4265546 intergenic not near genes chr2L 4265633 intergenic not near genes chr2L_12_4265001 chr2L_4265001 RAL-301_125b 292 chr2L 4317878 4317906 chr2L 4318006 4318034 8 128 16.5 19.5 18.0 0.4 156 chr2L 4317878 intron tutl + chr2L 4317956 intron tutl + chr2L 4318034 intron tutl + chr2L_8_4315001 chr2L_4315001 RAL-301_125b 293 chr2L 4325595 4325632 chr2L 4325824 4325860 7 229 3.0 6.0 4.5 1.3 265 chr2L 4325595 intron CG16857 + chr2L 4325728 intron CG16857 + chr2L 4325860 intron CG16857 + chr2L_7_4325001 chr2L_4325001 RAL-301_125b 294 chr2L 4351430 4351497 chr2L 4351556 4351623 34 127 8.0 9.0 8.5 3.6 193 chr2L 4351430 5` UTR CR44700 + chr2L 4351526 intergenic CR44700 + chr2L 4351623 intergenic CR44700 + chr2L_34_4350001 chr2L_4350001 RAL-301_125b 295 chr2L 4359986 4360033 chr2L 4360194 4360241 17 208 12.0 9.5 10.8 1.4 255 chr2L 4359986 intergenic not near genes chr2L 4360114 intergenic not near genes chr2L 4360241 intergenic not near genes chr2L_17_4360001 chr2L_4360001 RAL-301_125b 296 chr2L 4371109 4371174 chr2L 4371247 4371312 5 138 17.5 9.0 13.2 0.4 203 chr2L 4371109 intron Traf4 + chr2L 4371210 intron Traf4 + chr2L 4371312 intron Traf4 + chr2L_5_4370001 chr2L_4370001 RAL-301_125b 297 chr2L 4428479 4428503 chr2L 4428824 4428858 4 349 22.0 29.5 25.8 0.1 379 chr2L 4428479 intron CG15431 - chr2L 4428668 intron CG15431 - chr2L 4428858 intron CG15431 - chr2L_4_4425001 chr2L_4425001 RAL-301_125b 298 chr2L 4435037 4435194 chr2L 4435173 4435307 8 130 8.0 6.5 7.2 1.0 270 chr2L 4435037 intron,3` UTR,3` UTR CG15431 -,CG34177 +,CG34178 + chr2L 4435172 intron CG15431 - chr2L 4435307 intron CG15431 - chr2L_8_4435001 chr2L_4435001 RAL-301_125b 299 chr2L 4436353 4436421 chr2L 4436596 4436649 13 242 21.0 31.5 26.2 0.5 296 chr2L 4436353 intron CG15431 - chr2L 4436501 intron CG15431 - chr2L 4436649 intron CG15431 - chr2L_13_4435001 chr2L_4435001 RAL-301_125b 300 chr2L 4438961 4439024 chr2L 4439097 4439160 15 135 17.0 12.0 14.5 1.0 199 chr2L 4438961 intron CG15431 - chr2L 4439060 intron CG15431 - chr2L 4439160 5` UTR CG15431 - chr2L_15_4435001 chr2L_4435001 RAL-301_125b 301 chr2L 4477154 4477213 chr2L 4477297 4477356 15 150 55.0 41.0 48.0 0.3 202 chr2L 4477154 intergenic ine -,dp - chr2L 4477255 intergenic dp -,ine - chr2L 4477356 intergenic dp -,ine - chr2L_15_4475001 chr2L_4475001 RAL-301_125b 302 chr2L 4487202 4487263 chr2L 4487352 4487413 13 150 16.0 17.0 16.5 0.7 211 chr2L 4487202 intron dp - chr2L 4487308 intron dp - chr2L 4487413 intron dp - chr2L_13_4485001 chr2L_4485001 RAL-301_125b 303 chr2L 4562821 4562872 chr2L 4562963 4562979 8 138 21.5 8.0 14.8 0.5 158 chr2L 4562821 intron dp - chr2L 4562900 intron dp - chr2L 4562979 intron dp - chr2L_8_4560001 chr2L_4560001 RAL-301_125b 304 chr2L 4595817 4595862 chr2L 4595957 4596002 22 139 9.5 10.5 10.0 2.0 185 chr2L 4595817 intron dp - chr2L 4595910 intron dp - chr2L 4596002 intron dp - chr2L_22_4595001 chr2L_4595001 RAL-301_125b 305 chr2L 4601658 4601729 chr2L 4609149 4609220 mdg1 26 7491 5.0 4.0 4.5 4.7 7562 chr2L 4601658 intron dp - chr2L 4605439 intron dp - chr2L 4609220 intron dp - chr2L_26_4605001 chr2L_4605001 RAL-301_125b 306 chr2L 4661795 4661844 chr2L 4669425 4669474 opus 10 7630 3.0 6.5 4.8 1.7 7679 chr2L 4661795 intergenic not near genes chr2L 4665634 intergenic not near genes chr2L 4669474 intergenic not near genes chr2L_10_4665001 chr2L_4665001 RAL-301_125b 307 chr2L 4672018 4672098 chr2L 4672153 4672225 18 130 8.5 14.0 11.2 1.5 207 chr2L 4672018 intergenic not near genes chr2L 4672122 intergenic not near genes chr2L 4672225 intergenic not near genes chr2L_18_4670001 chr2L_4670001 RAL-301_125b 308 chr2L 4693357 4693416 chr2L 4693574 4693633 14 217 22.0 22.5 22.2 0.6 276 chr2L 4693357 intergenic not near genes chr2L 4693495 intergenic not near genes chr2L 4693633 intergenic not near genes chr2L_14_4690001 chr2L_4690001 RAL-301_125b 309 chr2L 4718717 4718779 chr2L 4718862 4718919 10 142 29.5 32.0 30.8 0.3 202 chr2L 4718717 intron CG34351 + chr2L 4718818 intron CG34351 + chr2L 4718919 intron CG34351 + chr2L_10_4715001 chr2L_4715001 RAL-301_125b 310 chr2L 4748648 4748710 chr2L 4748777 4748839 8 129 24.5 24.5 24.5 0.3 191 chr2L 4748648 intron CG15630 - chr2L 4748744 intron CG15630 - chr2L 4748839 intron CG15630 - chr2L_8_4745001 chr2L_4745001 RAL-301_125b 311 chr2L 4770063 4770134 chr2L 4770196 4770267 21 130 13.5 13.5 13.5 1.4 204 chr2L 4770063 intron CG15630 - chr2L 4770165 intron CG15630 - chr2L 4770267 intron CG15630 - chr2L_21_4770001 chr2L_4770001 RAL-301_125b 312 chr2L 4777048 4777107 chr2L 4777180 4777239 14 132 19.5 16.0 17.8 0.7 191 chr2L 4777048 intron CG15630 - chr2L 4777144 intron CG15630 - chr2L 4777239 intron CG15630 - chr2L_14_4775001 chr2L_4775001 RAL-301_125b 313 chr2L 4781080 4781138 chr2L 4781240 4781283 7 149 16.5 17.5 17.0 0.4 203 chr2L 4781080 intron CG15630 - chr2L 4781182 intron CG15630 - chr2L 4781283 intron CG15630 - chr2L_7_4780001 chr2L_4780001 RAL-301_125b 314 chr2L 4855252 4855330 chr2L 4855387 4855410 21 131 12.5 14.0 13.2 1.5 158 chr2L 4855252 intron pog + chr2L 4855331 intron pog + chr2L 4855410 intron pog + chr2L_21_4855001 chr2L_4855001 RAL-301_125b 315 chr2L 4856172 4856247 chr2L 4856421 4856496 11 248 23.0 18.5 20.8 0.5 324 chr2L 4856172 intron pog + chr2L 4856334 intron pog + chr2L 4856496 intron pog + chr2L_11_4855001 chr2L_4855001 RAL-301_125b 316 chr2L 4858408 4858476 chr2L 4858552 4858625 16 146 7.5 3.5 5.5 2.5 217 chr2L 4858408 intron pog + chr2L 4858516 intron pog + chr2L 4858625 intron pog + chr2L_16_4855001 chr2L_4855001 RAL-301_125b 317 chr2L 4901087 4901145 chr2L 4901239 4901297 13 152 21.0 34.0 27.5 0.5 210 chr2L 4901087 intron CG3036 + chr2L 4901192 intron CG3036 + chr2L 4901297 intron CG3036 + chr2L_13_4900001 chr2L_4900001 RAL-301_125b 318 chr2L 4918122 4918202 chr2L 4923249 4923363 jockey 25 5136 5.5 3.5 4.5 4.5 5241 chr2L 4918122 intron hoe1 - chr2L 4920742 intron hoe1 - chr2L 4923363 intron hoe1 - chr2L_25_4920001 chr2L_4920001 RAL-301_125b 319 chr2L 4923246 4923253 chr2L 4923387 4923394 6 141 6.0 25.0 15.5 0.4 148 chr2L 4923246 intron hoe1 - chr2L 4923320 intron hoe1 - chr2L 4923394 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-301_125b 320 chr2L 4925627 4925694 chr2L 4925756 4925823 4 129 28.5 23.0 25.8 0.1 196 chr2L 4925627 intron hoe1 - chr2L 4925725 intron hoe1 - chr2L 4925823 intron hoe1 - chr2L_4_4925001 chr2L_4925001 RAL-301_125b 321 chr2L 4953471 4953503 chr2L 4953762 4953794 pogo 17 291 14.0 9.5 11.8 1.3 323 chr2L 4953471 intergenic Jon25Bii - chr2L 4953632 intergenic Jon25Bii - chr2L 4953794 intergenic Jon25Bi - chr2L_17_4950001 chr2L_4950001 RAL-301_125b 322 chr2L 4996046 4996112 chr2L 4996173 4996239 23 127 20.5 23.0 21.8 1.0 193 chr2L 4996046 intron Rtnl1 - chr2L 4996142 intron Rtnl1 - chr2L 4996239 intron Rtnl1 - chr2L_23_4995001 chr2L_4995001 RAL-301_125b 323 chr2L 4998065 4998135 chr2L 4998228 4998262 24 159 14.5 19.0 16.8 1.3 197 chr2L 4998065 intron Rtnl1 - chr2L 4998164 intron Rtnl1 - chr2L 4998262 intron Rtnl1 - chr2L_24_4995001 chr2L_4995001 RAL-301_125b 324 chr2L 5027915 5027985 chr2L 5028049 5028119 8 134 21.5 29.5 25.5 0.3 204 chr2L 5027915 intron vkg - chr2L 5028017 intron vkg - chr2L 5028119 5` UTR vkg - chr2L_8_5025001 chr2L_5025001 RAL-301_125b 325 chr2L 5085006 5085020 chr2L 5085148 5085162 9 142 30.0 33.0 31.5 0.3 156 chr2L 5085006 intron pgant5 - chr2L 5085084 intron pgant5 - chr2L 5085162 intron pgant5 - chr2L_9_5085001 chr2L_5085001 RAL-301_125b 326 chr2L 5092365 5092438 chr2L 5092500 5092575 12 131 9.0 15.0 12.0 0.9 210 chr2L 5092365 intron pgant5 - chr2L 5092470 intron pgant5 - chr2L 5092575 intron pgant5 - chr2L_12_5090001 chr2L_5090001 RAL-301_125b 327 chr2L 5120928 5120994 chr2L 5121072 5121138 22 142 7.0 4.0 5.5 3.4 210 chr2L 5120928 intron Msp300 + chr2L 5121033 intron Msp300 + chr2L 5121138 intron Msp300 + chr2L_22_5120001 chr2L_5120001 RAL-301_125b 328 chr2L 5149250 5149328 chr2L 5149390 5149444 20 139 12.5 13.0 12.8 1.4 194 chr2L 5149250 intron Msp300 + chr2L 5149347 intron Msp300 + chr2L 5149444 intron Msp300 + chr2L_20_5145001 chr2L_5145001 RAL-301_125b 329 chr2L 5242907 5242936 chr2L 16217660 16217660 7 10974732 39.0 34.5 36.8 0.2 10974753 chr2L 5242907 intron tkv - chr2L 10730284 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_7_10730001 chr2L_10730001 RAL-301_125b 330 chr2L 5247391 5247413 chr2L 5247527 5247549 6 136 19.5 16.5 18.0 0.3 158 chr2L 5247391 intron tkv - chr2L 5247470 intron tkv - chr2L 5247549 intron tkv - chr2L_6_5245001 chr2L_5245001 RAL-301_125b 331 chr2L 5248333 5248399 chr2L 5249521 5249577 15 1187 30.5 19.5 25.0 0.6 1244 chr2L 5248333 intron tkv - chr2L 5248955 intron tkv - chr2L 5249577 intron tkv - chr2L_15_5245001 chr2L_5245001 RAL-301_125b 332 chr2L 5262493 5262543 chr2L 5262606 5262670 12 126 22.5 22.0 22.2 0.5 177 chr2L 5262493 intron tkv - chr2L 5262582 intron tkv - chr2L 5262670 intron tkv - chr2L_12_5260001 chr2L_5260001 RAL-301_125b 333 chr2L 5276679 5276733 chr2L 5276812 5276867 16 133 14.0 15.5 14.8 1.0 188 chr2L 5276679 exon Bsg25D - chr2L 5276773 intron Bsg25D - chr2L 5276867 intron Bsg25D - chr2L_16_5275001 chr2L_5275001 RAL-301_125b 334 chr2L 5339007 5339073 chr2L 5339141 5339206 6 134 21.5 17.0 19.2 0.3 199 chr2L 5339007 intergenic CG12512 - chr2L 5339106 intergenic CG12512 - chr2L 5339206 3` UTR CG12512 - chr2L_6_5335001 chr2L_5335001 RAL-301_125b 335 chr2L 5342727 5342756 chr2L 5345157 5345186 Doc 4 2430 3.5 2.5 3.0 1.0 2459 chr2L 5342727 intergenic CG12512 - chr2L 5343956 intergenic not near genes chr2L 5345186 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-301_125b 336 chr2L 5342758 5342789 chr2L 5345151 5345219 Doc 12 2402 1.0 2.0 1.5 4.8 2461 chr2L 5342758 intergenic not near genes chr2L 5343988 intergenic not near genes chr2L 5345219 intergenic not near genes chr2L_12_5340001 chr2L_5340001 RAL-301_125b 337 chr2L 5367440 5367499 chr2L 5367770 5367829 8 330 25.0 29.0 27.0 0.3 389 chr2L 5367440 intergenic not near genes chr2L 5367634 intergenic not near genes chr2L 5367829 intergenic not near genes chr2L_8_5365001 chr2L_5365001 RAL-301_125b 338 chr2L 5397965 5398039 chr2L 5398095 5398117 11 110 17.0 16.5 16.8 0.6 152 chr2L 5397965 intergenic not near genes chr2L 5398041 intergenic not near genes chr2L 5398117 intergenic not near genes chr2L_11_5395001 chr2L_5395001 RAL-301_125b 339 chr2L 5433804 5433843 chr2L 5433951 5433990 13 147 16.5 15.0 15.8 0.8 186 chr2L 5433804 3` UTR CR43715 - chr2L 5433897 3` UTR CR43715 - chr2L 5433990 3` UTR CR43715 - chr2L_13_5430001 chr2L_5430001 RAL-301_125b 340 chr2L 5475101 5475161 chr2L 5475256 5475314 17 155 19.0 16.0 17.5 0.9 213 chr2L 5475101 intergenic not near genes chr2L 5475208 intergenic not near genes chr2L 5475314 intergenic not near genes chr2L_17_5475001 chr2L_5475001 RAL-301_125b 341 chr2L 5500013 5500070 chr2L 5500149 5500206 9 136 10.5 25.0 17.8 0.5 193 chr2L 5500013 intergenic not near genes chr2L 5500110 intergenic not near genes chr2L 5500206 intergenic not near genes chr2L_9_5500001 chr2L_5500001 RAL-301_125b 342 chr2L 5501404 5501462 chr2L 5501530 5501588 11 126 24.0 24.0 24.0 0.4 184 chr2L 5501404 intergenic not near genes chr2L 5501496 intergenic not near genes chr2L 5501588 intergenic not near genes chr2L_11_5500001 chr2L_5500001 RAL-301_125b 343 chr2L 5516607 5516682 chr2L 5516736 5516811 27 129 27.5 26.0 26.8 1.0 204 chr2L 5516607 intergenic not near genes chr2L 5516709 intergenic not near genes chr2L 5516811 intergenic not near genes chr2L_27_5515001 chr2L_5515001 RAL-301_125b 344 chr2L 5517305 5517335 chr2L 5517431 5517461 11 125 8.0 16.5 12.2 0.8 156 chr2L 5517305 intergenic CG14020 + chr2L 5517383 intergenic CG14020 + chr2L 5517461 intergenic CG14020 + chr2L_11_5515001 chr2L_5515001 RAL-301_125b 345 chr2L 5543734 5543762 chr2L 5543897 5543924 6 163 13.5 12.0 12.8 0.4 190 chr2L 5543734 exon Lam + chr2L 5543829 intron Lam + chr2L 5543924 intron Lam + chr2L_6_5540001 chr2L_5540001 RAL-301_125b 346 chr2L 5543769 5543794 chr2L 5543896 5543957 7 158 12.0 12.0 12.0 0.5 188 chr2L 5543769 exon Lam + chr2L 5543863 intron Lam + chr2L 5543957 intron Lam + chr2L_7_5540001 chr2L_5540001 RAL-301_125b 347 chr2L 5573644 5573681 chr2L 5573770 5573807 5 126 31.0 30.5 30.8 0.2 163 chr2L 5573644 intergenic not near genes chr2L 5573726 intergenic not near genes chr2L 5573807 intergenic not near genes chr2L_5_5570001 chr2L_5570001 RAL-301_125b 348 chr2L 5605599 5605678 chr2L 5605743 5605820 5 143 18.5 12.5 15.5 0.3 221 chr2L 5605599 intron CG14010 - chr2L 5605710 intron CG14010 - chr2L 5605820 intron CG14010 - chr2L_5_5605001 chr2L_5605001 RAL-301_125b 349 chr2L 5646622 5646678 chr2L 5646773 5646782 5 125 11.5 18.0 14.8 0.3 160 chr2L 5646622 intron CG31646 - chr2L 5646702 intron CG31646 - chr2L 5646782 intron CG31646 - chr2L_5_5645001 chr2L_5645001 RAL-301_125b 350 chr2L 5666270 5666306 chr2L 5666410 5666445 11 139 17.5 19.5 18.5 0.6 175 chr2L 5666270 intron Hsp60C + chr2L 5666358 intron Hsp60C + chr2L 5666445 intron Hsp60C + chr2L_11_5665001 chr2L_5665001 RAL-301_125b 351 chr2L 5668555 5668615 chr2L 5668683 5668744 14 128 13.5 14.5 14.0 0.9 189 chr2L 5668555 intron Hsp60C + chr2L 5668650 intron Hsp60C + chr2L 5668744 intron Hsp60C + chr2L_14_5665001 chr2L_5665001 RAL-301_125b 352 chr2L 5686411 5686442 chr2L 5686543 5686574 4 132 33.0 32.0 32.5 0.1 163 chr2L 5686411 intergenic not near genes chr2L 5686492 intergenic not near genes chr2L 5686574 intergenic not near genes chr2L_4_5685001 chr2L_5685001 RAL-301_125b 353 chr2L 5689976 5690033 chr2L 5690152 5690209 12 175 24.5 19.5 22.0 0.5 233 chr2L 5689976 intergenic not near genes chr2L 5690092 intergenic CR44819 +,CR44820 - chr2L 5690209 intergenic CR44819 +,CR44820 - chr2L_12_5690001 chr2L_5690001 RAL-301_125b 354 chr2L 5695814 5695887 chr2L 5695956 5696029 9 142 26.5 27.0 26.8 0.3 215 chr2L 5695814 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696029 intergenic not near genes chr2L_9_5695001 chr2L_5695001 RAL-301_125b 355 chr2L 5774561 5774610 chr2L 5774809 5774874 12 262 12.5 20.5 16.5 0.7 313 chr2L 5774561 intron CG9171 - chr2L 5774718 intron CG9171 - chr2L 5774874 intron CG9171 - chr2L_12_5770001 chr2L_5770001 RAL-301_125b 356 chr2L 5784907 5784973 chr2L 5785040 5785106 11 133 19.0 17.0 18.0 0.6 199 chr2L 5784907 intron CG9171 - chr2L 5785006 intron CG9171 - chr2L 5785106 intron CG9171 - chr2L_11_5785001 chr2L_5785001 RAL-301_125b 357 chr2L 5807276 5807307 chr2L 5807606 5807639 4 328 13.5 26.0 19.8 0.2 363 chr2L 5807276 exon CG11034 + chr2L 5807458 exon CG11034 + chr2L 5807639 intron CG11034 + chr2L_4_5805001 chr2L_5805001 RAL-301_125b 358 chr2L 5822457 5822493 chr2L 5824009 5824031 8 1561 21.0 17.0 19.0 0.4 1574 chr2L 5822457 intergenic not near genes chr2L 5823244 intergenic not near genes chr2L 5824031 5` UTR TrissinR + chr2L_8_5820001 chr2L_5820001 RAL-301_125b 359 chr2L 5827680 5827739 chr2L 5836738 5836797 roo 21 9056 10.0 9.5 9.8 1.9 9117 chr2L 5827680 intron TrissinR + chr2L 5832238 intron TrissinR + chr2L 5836797 intron TrissinR + chr2L_21_5830001 chr2L_5830001 RAL-301_125b 360 chr2L 5839048 5839125 chr2L 5839178 5839251 18 127 15.0 17.0 16.0 1.1 203 chr2L 5839048 intron TrissinR + chr2L 5839150 intron TrissinR + chr2L 5839251 intron TrissinR + chr2L_18_5835001 chr2L_5835001 RAL-301_125b 361 chr2L 5900220 5900288 chr2L 5900362 5900430 9 141 30.5 30.5 30.5 0.3 210 chr2L 5900220 3` UTR CR44579 - chr2L 5900325 3` UTR CR44579 - chr2L 5900430 intergenic CR44579 - chr2L_9_5900001 chr2L_5900001 RAL-301_125b 362 chr2L 5904412 5904440 chr2L 5904542 5904570 5 129 20.5 3.0 11.8 0.4 158 chr2L 5904412 exon CG9021 - chr2L 5904491 intron CG9021 - chr2L 5904570 intron CG9021 - chr2L_5_5900001 chr2L_5900001 RAL-301_125b 363 chr2L 5922762 5922908 chr2L 5922901 5923050 8 140 31.0 30.0 30.5 0.3 288 chr2L 5922762 3` UTR bchs + chr2L 5922906 3` UTR CG9016 - chr2L 5923050 3` UTR CG9016 - chr2L_8_5920001 chr2L_5920001 RAL-301_125b 364 chr2L 5926219 5926451 chr2L 5926348 5926589 6 188 16.5 10.0 13.2 0.4 370 chr2L 5926219 intron dsf + chr2L 5926404 intron dsf + chr2L 5926589 intron dsf + chr2L_6_5925001 chr2L_5925001 RAL-301_125b 365 chr2L 5976903 5976965 chr2L 5977039 5977099 16 136 15.0 9.5 12.2 1.2 196 chr2L 5976903 intron chic - chr2L 5977001 intron chic - chr2L 5977099 intron chic - chr2L_16_5975001 chr2L_5975001 RAL-301_125b 366 chr2L 5988986 5989028 chr2L 5989112 5989154 19 126 30.0 16.0 23.0 0.8 168 chr2L 5988986 intergenic ifc +,lid - chr2L 5989070 intergenic ifc +,lid - chr2L 5989154 intergenic lid -,ifc + chr2L_19_5985001 chr2L_5985001 RAL-301_125b 367 chr2L 6007045 6007072 chr2L 6007171 6007198 20 126 20.5 7.5 14.0 1.3 153 chr2L 6007045 intergenic Gal -,CG9098 - chr2L 6007122 intergenic CG9098 -,Gal - chr2L 6007198 intergenic CG9098 -,Gal - chr2L_20_6005001 chr2L_6005001 RAL-301_125b 368 chr2L 6011314 6011384 chr2L 6011504 6011574 20 190 10.0 10.5 10.2 1.8 260 chr2L 6011314 intron CG9098 - chr2L 6011444 intron CG9098 - chr2L 6011574 5` UTR CG9098 - chr2L_20_6010001 chr2L_6010001 RAL-301_125b 369 chr2L 6019615 6019620 chr2L 6019773 6019778 5 158 20.0 30.0 25.0 0.2 163 chr2L 6019615 intergenic H2.0 - chr2L 6019696 intergenic H2.0 - chr2L 6019778 intergenic H2.0 - chr2L_5_6015001 chr2L_6015001 RAL-301_125b 370 chr2L 6053831 6053885 chr2L 6053957 6054011 17 126 24.5 26.5 25.5 0.6 180 chr2L 6053831 3` UTR CG9135 + chr2L 6053921 intergenic CG9135 +,CG13995 + chr2L 6054011 intergenic CG9135 +,CG13995 + chr2L_17_6050001 chr2L_6050001 RAL-301_125b 371 chr2L 6101724 6101786 chr2L 6101859 6101921 19 134 14.0 18.5 16.2 1.1 197 chr2L 6101724 5` UTR stai + chr2L 6101822 intron stai + chr2L 6101921 intron stai + chr2L_19_6100001 chr2L_6100001 RAL-301_125b 372 chr2L 6103168 6103247 chr2L 6103296 6103359 12 126 11.5 11.5 11.5 1.0 191 chr2L 6103168 intron stai + chr2L 6103264 intron stai + chr2L 6103359 intron stai + chr2L_12_6100001 chr2L_6100001 RAL-301_125b 373 chr2L 6104746 6104810 chr2L 6105342 6105396 12 594 7.0 34.0 20.5 0.6 650 chr2L 6104746 intron stai + chr2L 6105071 intron stai + chr2L 6105396 intron stai + chr2L_12_6105001 chr2L_6105001 RAL-301_125b 374 chr2L 6117513 6117569 chr2L 6117660 6117711 16 143 17.5 13.5 15.5 1.0 198 chr2L 6117513 intron stai + chr2L 6117612 intron stai + chr2L 6117711 intron stai + chr2L_16_6115001 chr2L_6115001 RAL-301_125b 375 chr2L 6136503 6136582 chr2L 6136649 6136729 28 147 2.0 7.5 4.8 4.8 226 chr2L 6136503 intergenic not near genes chr2L 6136616 intergenic not near genes chr2L 6136729 intergenic not near genes chr2L_28_6135001 chr2L_6135001 RAL-301_125b 376 chr2L 6185392 6185468 chr2L 6185520 6185596 7 113 27.0 27.0 27.0 0.2 204 chr2L 6185392 intron CG34380 + chr2L 6185494 intron CG34380 + chr2L 6185596 intron CG34380 + chr2L_7_6185001 chr2L_6185001 RAL-301_125b 377 chr2L 6213647 6213702 chr2L 6213780 6213812 7 130 35.0 27.5 31.2 0.2 165 chr2L 6213647 intergenic not near genes chr2L 6213730 intergenic not near genes chr2L 6213812 intergenic not near genes chr2L_7_6210001 chr2L_6210001 RAL-301_125b 378 chr2L 6227673 6227715 chr2L 6227801 6227849 5 133 21.5 12.0 16.8 0.3 176 chr2L 6227673 intergenic not near genes chr2L 6227761 intergenic not near genes chr2L 6227849 intergenic not near genes chr2L_5_6225001 chr2L_6225001 RAL-301_125b 379 chr2L 6242817 6242836 chr2L 6242943 6242972 8 134 15.0 11.0 13.0 0.6 155 chr2L 6242817 intergenic not near genes chr2L 6242894 intergenic not near genes chr2L 6242972 intergenic not near genes chr2L_8_6240001 chr2L_6240001 RAL-301_125b 380 chr2L 6272103 6272156 chr2L 6272237 6272289 9 133 28.0 25.0 26.5 0.3 186 chr2L 6272103 intron Ddr + chr2L 6272196 intron Ddr + chr2L 6272289 intron Ddr + chr2L_9_6270001 chr2L_6270001 RAL-301_125b 381 chr2L 6283892 6283978 chr2L 6284053 6284140 12 161 3.0 0.0 1.5 4.8 248 chr2L 6283892 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284140 intron Ddr + chr2L_12_6280001 chr2L_6280001 RAL-301_125b 382 chr2L 6291934 6291990 chr2L 6292308 6292364 7 373 30.0 22.0 26.0 0.3 430 chr2L 6291934 intron Ddr + chr2L 6292149 intron Ddr + chr2L 6292364 intron Ddr + chr2L_7_6290001 chr2L_6290001 RAL-301_125b 383 chr2L 6316292 6316318 chr2L 6316430 6316456 9 138 0.0 10.0 5.0 1.5 164 chr2L 6316292 intron Ddr + chr2L 6316374 intron Ddr + chr2L 6316456 intron Ddr + chr2L_9_6315001 chr2L_6315001 RAL-301_125b 384 chr2L 6318703 6318762 chr2L 6318907 6318966 30 203 8.5 12.0 10.2 2.7 263 chr2L 6318703 intron Ddr + chr2L 6318834 intron Ddr + chr2L 6318966 intron Ddr + chr2L_30_6315001 chr2L_6315001 RAL-301_125b 385 chr2L 6343671 6343720 chr2L 6343935 6343984 19 264 53.5 31.5 42.5 0.4 313 chr2L 6343671 intron Cpr + chr2L 6343828 intron Cpr + chr2L 6343984 intron Cpr + chr2L_19_6340001 chr2L_6340001 RAL-301_125b 386 chr2L 6349027 6349075 chr2L 6349155 6349203 15 127 21.0 24.0 22.5 0.6 176 chr2L 6349027 intergenic CG9498 - chr2L 6349115 intergenic CG9498 - chr2L 6349203 intergenic CG9498 - chr2L_15_6345001 chr2L_6345001 RAL-301_125b 387 chr2L 6363112 6363177 chr2L 6366074 6366130 Burdock 42 2970 12.5 6.5 9.5 4.0 3018 chr2L 6363112 intergenic not near genes chr2L 6364621 intergenic not near genes chr2L 6366130 intergenic not near genes chr2L_42_6360001 chr2L_6360001 RAL-301_125b 388 chr2L 6390072 6390131 chr2L 6390205 6390261 9 130 12.5 0.0 6.2 1.2 189 chr2L 6390072 intron CG42368 - chr2L 6390166 intron CG42368 - chr2L 6390261 intron CG42368 - chr2L_9_6390001 chr2L_6390001 RAL-301_125b 389 chr2L 6411153 6411158 chr2L 6411280 6411285 4 127 15.5 23.5 19.5 0.2 132 chr2L 6411153 5` UTR CG42368 - chr2L 6411219 5` UTR CG42368 - chr2L 6411285 5` UTR CG42368 - chr2L_4_6410001 chr2L_6410001 RAL-301_125b 390 chr2L 6423839 6423908 chr2L 6423978 6424048 8 139 13.5 7.5 10.5 0.7 209 chr2L 6423839 intergenic Fic + chr2L 6423944 intergenic Fic + chr2L 6424048 intergenic Fic + chr2L_8_6420001 chr2L_6420001 RAL-301_125b 391 chr2L 6426813 6426884 chr2L 6445123 6445159 roo 44 18307 10.0 16.0 13.0 3.1 18346 chr2L 6426813 3` UTR CG9527 - chr2L 6435986 intron CG9527 - chr2L 6445159 exon CG9527 - chr2L_44_6435001 chr2L_6435001 RAL-301_125b 392 chr2L 6537092 6537165 chr2L 6537220 6537293 22 128 5.0 7.0 6.0 3.1 201 chr2L 6537092 intron eya - chr2L 6537192 intron eya - chr2L 6537293 intron eya - chr2L_22_6535001 chr2L_6535001 RAL-301_125b 393 chr2L 6544330 6544394 chr2L 6544472 6544536 8 142 2.0 4.5 3.2 1.9 206 chr2L 6544330 intron eya - chr2L 6544433 intron eya - chr2L 6544536 intron eya - chr2L_8_6540001 chr2L_6540001 RAL-301_125b 394 chr2L 6564799 6564868 chr2L 6564942 6565010 9 143 12.0 12.0 12.0 0.7 211 chr2L 6564799 3` UTR CG13766 - chr2L 6564904 3` UTR CG13766 - chr2L 6565010 3` UTR CG13766 - chr2L_9_6560001 chr2L_6560001 RAL-301_125b 395 chr2L 6590051 6590111 chr2L 6590179 6590232 13 127 37.5 29.5 33.5 0.4 181 chr2L 6590051 intron CG11319 - chr2L 6590142 intron CG11319 - chr2L 6590232 intron CG11319 - chr2L_13_6590001 chr2L_6590001 RAL-301_125b 396 chr2L 6600395 6600445 chr2L 6600525 6600575 9 124 24.5 24.5 24.5 0.4 180 chr2L 6600395 intron CG11319 - chr2L 6600485 intron CG11319 - chr2L 6600575 intron CG11319 - chr2L_9_6600001 chr2L_6600001 RAL-301_125b 397 chr2L 6605312 6605373 chr2L 6605460 6605521 11 148 33.5 28.0 30.8 0.3 209 chr2L 6605312 intergenic not near genes chr2L 6605416 intergenic not near genes chr2L 6605521 intergenic not near genes chr2L_11_6605001 chr2L_6605001 RAL-301_125b 398 chr2L 6613416 6613424 chr2L 6613664 6613672 4 248 22.5 17.0 19.8 0.2 256 chr2L 6613416 intron CG11050 + chr2L 6613544 intron CG11050 + chr2L 6613672 intron CG11050 + chr2L_4_6610001 chr2L_6610001 RAL-301_125b 399 chr2L 6723630 6723701 chr2L 6723767 6723838 22 137 11.5 14.0 12.8 1.6 208 chr2L 6723630 intergenic homer -,Liprin-alpha + chr2L 6723734 intergenic Liprin-alpha +,homer - chr2L 6723838 intergenic Liprin-alpha +,homer - chr2L_22_6720001 chr2L_6720001 RAL-301_125b 400 chr2L 6746049 6746118 chr2L 6746175 6746244 11 126 31.0 27.0 29.0 0.4 195 chr2L 6746049 intron CG11221 + chr2L 6746146 intron CG11221 + chr2L 6746244 intron CG11221 + chr2L_11_6745001 chr2L_6745001 RAL-301_125b 401 chr2L 6771358 6771551 chr2L 6771485 6771713 7 138 0.5 0.0 0.2 5.8 355 chr2L 6771358 intron CG11321 - chr2L 6771536 intron CG11321 - chr2L 6771713 intron CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-301_125b 402 chr2L 6771941 6772022 chr2L 6772078 6772128 25 131 5.5 7.0 6.2 3.5 187 chr2L 6771941 intron CG11321 - chr2L 6772034 intron CG11321 - chr2L 6772128 intron CG11321 - chr2L_25_6770001 chr2L_6770001 RAL-301_125b 403 chr2L 6772563 6772595 chr2L 6772692 6772726 10 127 18.5 25.0 21.8 0.4 163 chr2L 6772563 5` UTR CG11321 - chr2L 6772644 5` UTR CG11321 - chr2L 6772726 5` UTR CG11321 - chr2L_10_6770001 chr2L_6770001 RAL-301_125b 404 chr2L 6798948 6798951 chr2L 19299026 19299029 4 12500078 32.0 12.5 22.2 0.2 12500081 chr2L 6798948 intergenic nrv2 -,CR43610 + chr2L 13048988 intron CG9932 - chr2L 19299029 exon CG17564 - chr2L_4_13045001 chr2L_13045001 RAL-301_125b 405 chr2L 6799490 6799559 chr2L 6799628 6799697 24 136 10.5 6.0 8.2 2.6 207 chr2L 6799490 5` UTR CR43610 + chr2L 6799594 5` UTR CR43610 + chr2L 6799697 intergenic CR43610 +,CG17376 - chr2L_24_6795001 chr2L_6795001 RAL-301_125b 406 chr2L 6818078 6818142 chr2L 6818217 6818279 11 139 19.5 25.0 22.2 0.5 201 chr2L 6818078 intergenic not near genes chr2L 6818178 intergenic not near genes chr2L 6818279 intergenic not near genes chr2L_11_6815001 chr2L_6815001 RAL-301_125b 407 chr2L 6850333 6850406 chr2L 6850466 6850539 11 133 30.0 34.5 32.2 0.3 206 chr2L 6850333 intergenic not near genes chr2L 6850436 intergenic not near genes chr2L 6850539 intergenic not near genes chr2L_11_6850001 chr2L_6850001 RAL-301_125b 408 chr2L 6874644 6874709 chr2L 6874775 6874838 28 131 26.0 23.0 24.5 1.1 194 chr2L 6874644 intergenic Nlg2 +,CR44914 + chr2L 6874741 intergenic Nlg2 +,CR44914 + chr2L 6874838 intergenic Nlg2 +,CR44914 + chr2L_28_6870001 chr2L_6870001 RAL-301_125b 409 chr2L 6876734 6876806 chr2L 6882975 6883037 diver 21 6236 9.0 10.0 9.5 2.0 6303 chr2L 6876734 intron Nlg2 + chr2L 6879886 intron Nlg2 + chr2L 6883037 intron Nlg2 + chr2L_21_6875001 chr2L_6875001 RAL-301_125b 410 chr2L 6883695 6883772 chr2L 6883831 6883908 16 134 17.5 20.0 18.8 0.8 213 chr2L 6883695 intron Nlg2 + chr2L 6883802 intron Nlg2 + chr2L 6883908 intron Nlg2 + chr2L_16_6880001 chr2L_6880001 RAL-301_125b 411 chr2L 6887451 6887527 chr2L 6887651 6887729 6 201 29.5 22.0 25.8 0.2 278 chr2L 6887451 intron Nlg2 + chr2L 6887590 intron Nlg2 + chr2L 6887729 intron Nlg2 + chr2L_6_6885001 chr2L_6885001 RAL-301_125b 412 chr2L 6969239 6969303 chr2L 6969369 6969433 15 129 33.5 32.0 32.8 0.4 194 chr2L 6969239 3` UTR snRNP-U1-70K - chr2L 6969336 3` UTR snRNP-U1-70K - chr2L 6969433 3` UTR snRNP-U1-70K - chr2L_15_6965001 chr2L_6965001 RAL-301_125b 413 chr2L 6988296 6988364 chr2L 6988425 6988493 13 129 23.5 22.5 23.0 0.5 197 chr2L 6988296 intron uif - chr2L 6988394 intron uif - chr2L 6988493 intron uif - chr2L_13_6985001 chr2L_6985001 RAL-301_125b 414 chr2L 6991405 6991434 chr2L 6998551 6998605 HMS-Beagle 9 7167 18.0 6.5 12.2 0.7 7200 chr2L 6991405 intron uif - chr2L 6995005 intron uif - chr2L 6998605 intron uif - chr2L_9_6990001 chr2L_6990001 RAL-301_125b 415 chr2L 7025062 7025063 chr2L 13827836 13827839 5 6802774 42.0 25.5 33.8 0.1 6802777 chr2L 7025062 3` UTR CG31908 - chr2L 10426450 intron SmB - chr2L 13827839 intergenic tam -,Arpc1 - chr2L_5_10425001 chr2L_10425001 RAL-301_125b 416 chr2L 7051089 7051151 chr2L 7051231 7051277 9 137 6.0 11.5 8.8 0.9 188 chr2L 7051089 intron milt + chr2L 7051183 intron milt + chr2L 7051277 intron milt + chr2L_9_7050001 chr2L_7050001 RAL-301_125b 417 chr2L 7081662 7081723 chr2L 7081793 7081854 22 131 19.0 16.0 17.5 1.2 192 chr2L 7081662 intron Pvf2 - chr2L 7081758 intron Pvf2 - chr2L 7081854 intron Pvf2 - chr2L_22_7080001 chr2L_7080001 RAL-301_125b 418 chr2L 7107530 7107596 chr2L 7107669 7107736 10 137 11.0 18.0 14.5 0.6 206 chr2L 7107530 exon Pvf3 - chr2L 7107633 intron Pvf3 - chr2L 7107736 intron Pvf3 - chr2L_10_7105001 chr2L_7105001 RAL-301_125b 419 chr2L 7111704 7111790 chr2L 7111839 7111925 19 135 11.0 7.0 9.0 1.9 221 chr2L 7111704 intron Pvf3 - chr2L 7111814 intron Pvf3 - chr2L 7111925 intron Pvf3 - chr2L_19_7110001 chr2L_7110001 RAL-301_125b 420 chr2L 7125745 7125811 chr2L 7125911 7125977 23 166 17.5 18.0 17.8 1.2 232 chr2L 7125745 intron Pvf3 - chr2L 7125861 intron Pvf3 - chr2L 7125977 intron Pvf3 - chr2L_23_7125001 chr2L_7125001 RAL-301_125b 421 chr2L 7126818 7126847 chr2L 7126947 7126976 6 129 35.5 23.5 29.5 0.2 158 chr2L 7126818 intron Pvf3 - chr2L 7126897 intron Pvf3 - chr2L 7126976 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-301_125b 422 chr2L 7137968 7137984 chr2L 7138108 7138124 5 140 19.5 25.5 22.5 0.2 156 chr2L 7137968 intron Pvf3 - chr2L 7138046 intron Pvf3 - chr2L 7138124 intron Pvf3 - chr2L_5_7135001 chr2L_7135001 RAL-301_125b 423 chr2L 7143119 7143184 chr2L 7143250 7143315 12 131 12.5 17.0 14.8 0.8 196 chr2L 7143119 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143217 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143315 intron,5` UTR Pvf3 -,CR44612 + chr2L_12_7140001 chr2L_7140001 RAL-301_125b 424 chr2L 7149941 7150011 chr2L 7150091 7150161 12 150 18.5 12.5 15.5 0.7 220 chr2L 7149941 intron Pvf3 - chr2L 7150051 intron Pvf3 - chr2L 7150161 intron Pvf3 - chr2L_12_7150001 chr2L_7150001 RAL-301_125b 425 chr2L 7151790 7151848 chr2L 7152135 7152193 7 345 24.0 25.0 24.5 0.3 403 chr2L 7151790 intron Pvf3 - chr2L 7151992 intron Pvf3 - chr2L 7152193 intron Pvf3 - chr2L_7_7150001 chr2L_7150001 RAL-301_125b 426 chr2L 7152147 7152212 chr2L 7152279 7152341 14 130 15.5 12.5 14.0 0.9 194 chr2L 7152147 intron Pvf3 - chr2L 7152244 intron Pvf3 - chr2L 7152341 intron Pvf3 - chr2L_14_7150001 chr2L_7150001 RAL-301_125b 427 chr2L 7167100 7167122 chr2L 7167226 7167242 11 125 21.0 5.5 13.2 0.8 142 chr2L 7167100 intergenic not near genes chr2L 7167171 intergenic not near genes chr2L 7167242 intergenic not near genes chr2L_11_7165001 chr2L_7165001 RAL-301_125b 428 chr2L 7197985 7198014 chr2L 7198114 7198143 6 129 13.0 17.0 15.0 0.4 158 chr2L 7197985 intron CG4502 - chr2L 7198064 intron CG4502 - chr2L 7198143 intron CG4502 - chr2L_6_7195001 chr2L_7195001 RAL-301_125b 429 chr2L 7215231 7215290 chr2L 7215363 7215423 5 132 13.0 13.5 13.2 0.4 192 chr2L 7215231 intron CG13784 - chr2L 7215327 intron CG13784 - chr2L 7215423 intron CG13784 - chr2L_5_7215001 chr2L_7215001 RAL-301_125b 430 chr2L 7216793 7216839 chr2L 7216919 7216965 9 126 19.0 20.5 19.8 0.4 172 chr2L 7216793 intron CG13784 - chr2L 7216879 intron CG13784 - chr2L 7216965 intron CG13784 - chr2L_9_7215001 chr2L_7215001 RAL-301_125b 431 chr2L 7249572 7249650 chr2L 7249702 7249769 14 128 20.0 20.0 20.0 0.7 197 chr2L 7249572 intergenic Ndae1 - chr2L 7249670 intergenic Ndae1 - chr2L 7249769 intergenic Ndae1 - chr2L_14_7245001 chr2L_7245001 RAL-301_125b 432 chr2L 7282531 7282554 chr2L 7282642 7282683 11 118 19.5 18.5 19.0 0.6 152 chr2L 7282531 intergenic not near genes chr2L 7282607 intergenic not near genes chr2L 7282683 intergenic not near genes chr2L_11_7280001 chr2L_7280001 RAL-301_125b 433 chr2L 7295947 7296016 chr2L 7296135 7296205 16 190 20.5 22.5 21.5 0.7 258 chr2L 7295947 intergenic not near genes chr2L 7296076 intergenic not near genes chr2L 7296205 intergenic not near genes chr2L_16_7295001 chr2L_7295001 RAL-301_125b 434 chr2L 7325885 7325933 chr2L 7326020 7326052 5 129 24.5 28.0 26.2 0.2 167 chr2L 7325885 intergenic not near genes chr2L 7325968 intergenic not near genes chr2L 7326052 intergenic not near genes chr2L_5_7325001 chr2L_7325001 RAL-301_125b 435 chr2L 7326444 7326483 chr2L 7326607 7326651 5 167 14.0 11.0 12.5 0.4 207 chr2L 7326444 intergenic not near genes chr2L 7326548 intergenic not near genes chr2L 7326651 intergenic not near genes chr2L_5_7325001 chr2L_7325001 RAL-301_125b 436 chr2L 7335163 7335231 chr2L 7335310 7335378 23 147 18.0 19.0 18.5 1.2 215 chr2L 7335163 intron Wnt6 + chr2L 7335270 intron Wnt6 + chr2L 7335378 intron Wnt6 + chr2L_23_7335001 chr2L_7335001 RAL-301_125b 437 chr2L 7343295 7343338 chr2L 7350461 7350497 roo 21 7162 12.5 10.0 11.2 1.7 7202 chr2L 7343295 intron Wnt6 + chr2L 7346896 intron Wnt6 + chr2L 7350497 intron Wnt6 + chr2L_21_7345001 chr2L_7345001 RAL-301_125b 438 chr2L 7351027 7351069 chr2L 7351157 7351227 8 149 15.5 3.0 9.2 0.8 200 chr2L 7351027 intron Wnt6 + chr2L 7351127 intron Wnt6 + chr2L 7351227 exon Wnt6 + chr2L_8_7350001 chr2L_7350001 RAL-301_125b 439 chr2L 7377840 7377902 chr2L 7377987 7378049 21 146 1.0 10.5 5.8 3.1 209 chr2L 7377840 5` UTR ninaC + chr2L 7377944 intron ninaC + chr2L 7378049 intron ninaC + chr2L_21_7375001 chr2L_7375001 RAL-301_125b 440 chr2L 7399267 7399315 chr2L 7399690 7399738 9 423 17.0 23.0 20.0 0.4 471 chr2L 7399267 intergenic not near genes chr2L 7399502 intergenic not near genes chr2L 7399738 intergenic not near genes chr2L_9_7395001 chr2L_7395001 RAL-301_125b 441 chr2L 7436147 7436210 chr2L 7436291 7436369 22 143 15.0 2.5 8.8 2.2 222 chr2L 7436147 intergenic not near genes chr2L 7436258 intergenic not near genes chr2L 7436369 intergenic not near genes chr2L_22_7435001 chr2L_7435001 RAL-301_125b 442 chr2L 7436212 7436218 chr2L 7436350 7436377 6 148 11.5 9.5 10.5 0.5 165 chr2L 7436212 intergenic not near genes chr2L 7436294 intergenic not near genes chr2L 7436377 intergenic not near genes chr2L_6_7435001 chr2L_7435001 RAL-301_125b 443 chr2L 7437182 7437202 chr2L 7437312 7437332 4 130 31.0 29.5 30.2 0.1 150 chr2L 7437182 intergenic CG5973 + chr2L 7437257 intergenic CG5973 + chr2L 7437332 intergenic CG5973 + chr2L_4_7435001 chr2L_7435001 RAL-301_125b 444 chr2L 7454661 7454685 chr2L 7454799 7454824 8 138 24.5 25.5 25.0 0.3 163 chr2L 7454661 intergenic Gr28b -,Gr28a - chr2L 7454742 intergenic Gr28b - chr2L 7454824 intergenic Gr28b - chr2L_8_7450001 chr2L_7450001 RAL-301_125b 445 chr2L 5904539 5904540 chr2L 7466148 7466149 12 1561609 3.0 14.0 8.5 1.3 1561610 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_12_6685001 chr2L_6685001 RAL-301_125b 446 chr2L 7486248 7486255 chr2L 7486375 7486382 4 127 33.0 39.5 36.2 0.1 134 chr2L 7486248 intron Ziz - chr2L 7486315 intron Ziz - chr2L 7486382 intron Ziz - chr2L_4_7485001 chr2L_7485001 RAL-301_125b 447 chr2L 7493353 7493413 chr2L 7493494 7493549 18 138 6.5 16.0 11.2 1.5 196 chr2L 7493353 intron Ziz - chr2L 7493451 intron Ziz - chr2L 7493549 intron Ziz - chr2L_18_7490001 chr2L_7490001 RAL-301_125b 448 chr2L 7512990 7513020 chr2L 7513099 7513150 11 127 17.5 26.5 22.0 0.5 160 chr2L 7512990 intron RapGAP1 - chr2L 7513070 intron RapGAP1 - chr2L 7513150 intron RapGAP1 - chr2L_11_7510001 chr2L_7510001 RAL-301_125b 449 chr2L 7513716 7513777 chr2L 7513850 7513911 17 134 8.0 13.5 10.8 1.4 195 chr2L 7513716 intron RapGAP1 - chr2L 7513814 intron RapGAP1 - chr2L 7513911 intron RapGAP1 - chr2L_17_7510001 chr2L_7510001 RAL-301_125b 450 chr2L 7518539 7518588 chr2L 7518652 7518722 16 122 16.0 19.0 17.5 0.9 183 chr2L 7518539 intron RapGAP1 - chr2L 7518630 intron RapGAP1 - chr2L 7518722 intron RapGAP1 - chr2L_16_7515001 chr2L_7515001 RAL-301_125b 451 chr2L 7520659 7520717 chr2L 7520829 7520887 19 170 19.0 12.5 15.8 1.1 228 chr2L 7520659 intron RapGAP1 - chr2L 7520773 intron RapGAP1 - chr2L 7520887 intron RapGAP1 - chr2L_19_7520001 chr2L_7520001 RAL-301_125b 452 chr2L 7547097 7547142 chr2L 7547216 7547262 12 123 13.0 13.0 13.0 0.9 165 chr2L 7547097 intron RapGAP1 - chr2L 7547180 intron RapGAP1 - chr2L 7547262 intron RapGAP1 - chr2L_12_7545001 chr2L_7545001 RAL-301_125b 453 chr2L 7548072 7548097 chr2L 7550555 7550589 Burdock 6 2488 8.0 17.5 12.8 0.4 2517 chr2L 7548072 intron RapGAP1 - chr2L 7549330 intron RapGAP1 - chr2L 7550589 intron RapGAP1 - chr2L_6_7545001 chr2L_7545001 RAL-301_125b 454 chr2L 7551866 7551901 chr2L 7551998 7552003 11 129 25.0 13.5 19.2 0.5 137 chr2L 7551866 intron RapGAP1 - chr2L 7551934 intron RapGAP1 - chr2L 7552003 intron RapGAP1 - chr2L_11_7550001 chr2L_7550001 RAL-301_125b 455 chr2L 7555191 7555233 chr2L 7555318 7555360 11 127 0.0 18.5 9.2 1.1 169 chr2L 7555191 intron RapGAP1 - chr2L 7555276 intron RapGAP1 - chr2L 7555360 intron RapGAP1 - chr2L_11_7555001 chr2L_7555001 RAL-301_125b 456 chr2L 7579152 7579180 chr2L 7579393 7579421 BS 15 241 26.5 12.0 19.2 0.7 269 chr2L 7579152 intergenic RapGAP1 - chr2L 7579286 intergenic RapGAP1 - chr2L 7579421 intergenic RapGAP1 - chr2L_15_7575001 chr2L_7575001 RAL-301_125b 457 chr2L 7579850 7579916 chr2L 7579982 7580048 14 132 20.0 18.0 19.0 0.7 198 chr2L 7579850 intergenic not near genes chr2L 7579949 intergenic not near genes chr2L 7580048 intergenic not near genes chr2L_14_7575001 chr2L_7575001 RAL-301_125b 458 chr2L 7585458 7585504 chr2L 7585607 7585653 6 149 14.0 8.5 11.2 0.5 195 chr2L 7585458 intergenic not near genes chr2L 7585556 intergenic not near genes chr2L 7585653 intergenic not near genes chr2L_6_7585001 chr2L_7585001 RAL-301_125b 459 chr2L 7591145 7591216 chr2L 7591377 7591448 10 231 21.5 25.0 23.2 0.4 303 chr2L 7591145 intergenic not near genes chr2L 7591296 intergenic not near genes chr2L 7591448 intergenic not near genes chr2L_10_7590001 chr2L_7590001 RAL-301_125b 460 chr2L 7625140 7625168 chr2L 7625288 7625316 7 145 32.5 32.0 32.2 0.2 176 chr2L 7625140 intergenic not near genes chr2L 7625228 intergenic not near genes chr2L 7625316 intergenic not near genes chr2L_7_7625001 chr2L_7625001 RAL-301_125b 461 chr2L 7629811 7629872 chr2L 7629962 7630022 15 150 29.5 29.5 29.5 0.5 211 chr2L 7629811 intergenic not near genes chr2L 7629916 intergenic not near genes chr2L 7630022 intergenic not near genes chr2L_15_7625001 chr2L_7625001 RAL-301_125b 462 chr2L 7630271 7630329 chr2L 7630434 7630472 15 161 19.5 12.0 15.8 0.9 201 chr2L 7630271 intergenic not near genes chr2L 7630372 intergenic not near genes chr2L 7630472 intergenic not near genes chr2L_15_7630001 chr2L_7630001 RAL-301_125b 463 chr2L 7640379 7640409 chr2L 7640515 7640545 5 136 14.5 12.0 13.2 0.4 166 chr2L 7640379 intergenic not near genes chr2L 7640462 intergenic not near genes chr2L 7640545 intergenic not near genes chr2L_5_7640001 chr2L_7640001 RAL-301_125b 464 chr2L 7660852 7660907 chr2L 7660999 7661051 15 139 8.5 20.0 14.2 1.0 199 chr2L 7660852 intron Slob - chr2L 7660952 intron Slob - chr2L 7661051 intron Slob - chr2L_15_7660001 chr2L_7660001 RAL-301_125b 465 chr2L 7664001 7664067 chr2L 7664148 7664213 11 147 22.0 20.5 21.2 0.5 212 chr2L 7664001 intron Slob - chr2L 7664107 intron Slob - chr2L 7664213 intron Slob - chr2L_11_7660001 chr2L_7660001 RAL-301_125b 466 chr2L 7766581 7766661 chr2L 7766707 7766787 9 118 16.5 11.5 14.0 0.6 206 chr2L 7766581 intergenic not near genes chr2L 7766684 intergenic not near genes chr2L 7766787 intergenic not near genes chr2L_9_7765001 chr2L_7765001 RAL-301_125b 467 chr2L 7770562 7770586 chr2L 7770733 7770757 5 171 6.0 9.5 7.8 0.6 195 chr2L 7770562 intron CG7191 + chr2L 7770660 intron CG7191 + chr2L 7770757 intron CG7191 + chr2L_5_7770001 chr2L_7770001 RAL-301_125b 468 chr2L 7775610 7775664 chr2L 7775752 7775806 8 142 15.0 19.5 17.2 0.4 196 chr2L 7775610 intergenic CG7179 - chr2L 7775708 intergenic CG7179 - chr2L 7775806 3` UTR CG7179 - chr2L_8_7775001 chr2L_7775001 RAL-301_125b 469 chr2L 7779405 7779413 chr2L 7779579 7779587 5 174 9.5 16.0 12.8 0.4 182 chr2L 7779405 intergenic not near genes chr2L 7779496 intergenic not near genes chr2L 7779587 intergenic Uro + chr2L_5_7775001 chr2L_7775001 RAL-301_125b 470 chr2L 7781288 7781307 chr2L 7781425 7781444 6 137 21.0 32.5 26.8 0.2 156 chr2L 7781288 3` UTR Uro + chr2L 7781366 3` UTR Uro + chr2L 7781444 intergenic CG7164 +,Uro + chr2L_6_7780001 chr2L_7780001 RAL-301_125b 471 chr2L 7854216 7854279 chr2L 7854333 7854406 22 127 19.5 18.0 18.8 1.1 190 chr2L 7854216 intron CG14535 - chr2L 7854311 intron CG14535 - chr2L 7854406 intron CG14535 - chr2L_22_7850001 chr2L_7850001 RAL-301_125b 472 chr2L 7867542 7867587 chr2L 7867686 7867731 7 144 26.5 34.0 30.2 0.2 189 chr2L 7867542 intron Proc - chr2L 7867636 intron Proc - chr2L 7867731 intron Proc - chr2L_7_7865001 chr2L_7865001 RAL-301_125b 473 chr2L 7873069 7873077 chr2L 7873201 7873209 5 132 7.5 7.5 7.5 0.6 140 chr2L 7873069 intergenic spz3 - chr2L 7873139 intergenic spz3 - chr2L 7873209 intergenic spz3 - chr2L_5_7870001 chr2L_7870001 RAL-301_125b 474 chr2L 7887656 7887670 chr2L 7887788 7887802 10 132 4.0 12.0 8.0 1.1 146 chr2L 7887656 intergenic Spn28Da -,CG7102 - chr2L 7887729 3` UTR Spn28Da - chr2L 7887802 exon Spn28Da - chr2L_10_7885001 chr2L_7885001 RAL-301_125b 475 chr2L 7922696 7922768 chr2L 7922827 7922899 29 130 7.5 8.0 7.8 3.3 203 chr2L 7922696 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922899 intron Snoo - chr2L_29_7920001 chr2L_7920001 RAL-301_125b 476 chr2L 7941158 7941189 chr2L 7941278 7941318 6 120 20.0 16.0 18.0 0.3 160 chr2L 7941158 intron Snoo - chr2L 7941238 intron Snoo - chr2L 7941318 intron Snoo - chr2L_6_7940001 chr2L_7940001 RAL-301_125b 477 chr2L 7959012 7959069 chr2L 7960473 7960532 pogo 4 1462 23.0 26.0 24.5 0.2 1520 chr2L 7959012 intron Snoo - chr2L 7959772 intron Snoo - chr2L 7960532 intron Snoo - chr2L_4_7955001 chr2L_7955001 RAL-301_125b 478 chr2L 7977047 7977106 chr2L 7984073 7984132 297 22 7024 6.5 7.0 6.8 2.8 7085 chr2L 7977047 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984132 5` UTR,5` UTR Snoo -,CG7231 + chr2L_22_7980001 chr2L_7980001 RAL-301_125b 479 chr2L 7984906 7984963 chr2L 7985083 7985141 14 177 3.0 12.5 7.8 1.6 235 chr2L 7984906 intron CG7231 + chr2L 7985024 intron CG7231 + chr2L 7985141 intron CG7231 + chr2L_14_7985001 chr2L_7985001 RAL-301_125b 480 chr2L 7986869 7986918 chr2L 7987014 7987064 18 143 7.0 17.5 12.2 1.4 195 chr2L 7986869 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987064 3` UTR pes - chr2L_18_7985001 chr2L_7985001 RAL-301_125b 481 chr2L 7996989 7997043 chr2L 7997139 7997193 28 150 23.0 25.0 24.0 1.1 204 chr2L 7996989 intron CG7227 - chr2L 7997091 intron CG7227 - chr2L 7997193 intron CG7227 - chr2L_28_7995001 chr2L_7995001 RAL-301_125b 482 chr2L 7999740 7999773 chr2L 7999867 7999900 13 123 10.0 27.0 18.5 0.7 160 chr2L 7999740 intron Wwox - chr2L 7999820 3` UTR Wwox - chr2L 7999900 exon Wwox - chr2L_13_7995001 chr2L_7995001 RAL-301_125b 483 chr2L 8002988 8003056 chr2L 8003120 8003188 20 132 4.5 8.5 6.5 2.7 200 chr2L 8002988 intron Wwox - chr2L 8003088 intron Wwox - chr2L 8003188 intron Wwox - chr2L_20_8000001 chr2L_8000001 RAL-301_125b 484 chr2L 8013569 8013587 chr2L 8018822 8018827 copia 9 5253 19.5 0.0 9.8 0.8 5258 chr2L 8013569 intron Tg + chr2L 8016198 intron Tg + chr2L 8018827 intron Tg + chr2L_9_8015001 chr2L_8015001 RAL-301_125b 485 chr2L 8013595 8013643 chr2L 8023581 8023629 copia 19 9986 6.0 4.5 5.2 3.1 10034 chr2L 8013595 intron Tg + chr2L 8018612 intron Tg + chr2L 8023629 intron Tg + chr2L_19_8015001 chr2L_8015001 RAL-301_125b 486 chr2L 8044046 8044126 chr2L 8044175 8044255 28 129 10.5 8.5 9.5 2.7 209 chr2L 8044046 exon CG7466 + chr2L 8044150 intron CG7466 + chr2L 8044255 intron CG7466 + chr2L_28_8040001 chr2L_8040001 RAL-301_125b 487 chr2L 8120509 8120570 chr2L 8120644 8120705 24 134 14.0 14.0 14.0 1.6 196 chr2L 8120509 exon mon2 - chr2L 8120607 intron mon2 - chr2L 8120705 exon mon2 - chr2L_24_8120001 chr2L_8120001 RAL-301_125b 488 chr2L 8165292 8165367 chr2L 8166053 8166081 23 752 16.5 20.5 18.5 1.2 789 chr2L 8165292 intron Piezo + chr2L 8165686 intron Piezo + chr2L 8166081 intron Piezo + chr2L_23_8165001 chr2L_8165001 RAL-301_125b 489 chr2L 8167112 8167174 chr2L 8167253 8167308 10 140 36.0 36.5 36.2 0.3 196 chr2L 8167112 intron Piezo + chr2L 8167210 intron Piezo + chr2L 8167308 intron Piezo + chr2L_10_8165001 chr2L_8165001 RAL-301_125b 490 chr2L 8171274 8171466 chr2L 8171405 8171625 25 151 21.0 17.5 19.2 1.2 351 chr2L 8171274 intron Piezo + chr2L 8171450 intron Piezo + chr2L 8171625 intron Piezo + chr2L_25_8170001 chr2L_8170001 RAL-301_125b 491 chr2L 8185444 8185515 chr2L 8185583 8185654 8 139 0.0 9.0 4.5 1.5 210 chr2L 8185444 intron Piezo + chr2L 8185549 intron Piezo + chr2L 8185654 intron Piezo + chr2L_8_8185001 chr2L_8185001 RAL-301_125b 492 chr2L 8231920 8232023 chr2L 8232078 8232151 7 154 35.0 35.5 35.2 0.2 231 chr2L 8231920 intron Pvr - chr2L 8232036 intron Pvr - chr2L 8232151 intron Pvr - chr2L_7_8230001 chr2L_8230001 RAL-301_125b 493 chr2L 8233090 8233157 chr2L 8233223 8233291 16 133 12.0 19.5 15.8 1.0 201 chr2L 8233090 intron Pvr - chr2L 8233190 intron Pvr - chr2L 8233291 intron Pvr - chr2L_16_8230001 chr2L_8230001 RAL-301_125b 494 chr2L 8244682 8244748 chr2L 8244854 8244920 11 172 8.5 2.0 5.2 1.8 238 chr2L 8244682 intron CG8086 - chr2L 8244801 intron CG8086 - chr2L 8244920 intron CG8086 - chr2L_11_8240001 chr2L_8240001 RAL-301_125b 495 chr2L 8253263 8253332 chr2L 8253389 8253448 13 124 13.5 15.5 14.5 0.8 185 chr2L 8253263 intron CG8086 - chr2L 8253356 intron CG8086 - chr2L 8253448 intron CG8086 - chr2L_13_8250001 chr2L_8250001 RAL-301_125b 496 chr2L 8271553 8271646 chr2L 8271694 8271772 17 129 14.5 16.5 15.5 1.0 219 chr2L 8271553 intron Btk29A - chr2L 8271662 intron Btk29A - chr2L 8271772 intron Btk29A - chr2L_17_8270001 chr2L_8270001 RAL-301_125b 497 chr2L 8286246 8286321 chr2L 8286383 8286454 11 135 26.5 21.5 24.0 0.4 208 chr2L 8286246 intron Btk29A - chr2L 8286350 intron Btk29A - chr2L 8286454 intron Btk29A - chr2L_11_8285001 chr2L_8285001 RAL-301_125b 498 chr2L 8334090 8334152 chr2L 8334218 8334280 16 128 0.0 8.0 4.0 3.2 190 chr2L 8334090 intergenic not near genes chr2L 8334185 intergenic not near genes chr2L 8334280 intergenic not near genes chr2L_16_8330001 chr2L_8330001 RAL-301_125b 499 chr2L 8334410 8334474 chr2L 8334539 8334603 10 129 8.5 18.5 13.5 0.7 193 chr2L 8334410 intergenic not near genes chr2L 8334506 intergenic not near genes chr2L 8334603 intergenic not near genes chr2L_10_8330001 chr2L_8330001 RAL-301_125b 500 chr2L 8336472 8336546 chr2L 8336607 8336681 22 131 22.0 17.5 19.8 1.1 209 chr2L 8336472 intergenic not near genes chr2L 8336576 intergenic not near genes chr2L 8336681 intergenic not near genes chr2L_22_8335001 chr2L_8335001 RAL-301_125b 501 chr2L 8336899 8336961 chr2L 8337028 8337090 22 129 2.0 12.0 7.0 2.8 191 chr2L 8336899 intergenic not near genes chr2L 8336994 intergenic not near genes chr2L 8337090 intergenic not near genes chr2L_22_8335001 chr2L_8335001 RAL-301_125b 502 chr2L 8348906 8348982 chr2L 8349041 8349115 24 131 14.0 20.0 17.0 1.3 209 chr2L 8348906 intron CG7778 + chr2L 8349010 intron CG7778 + chr2L 8349115 exon CG7778 + chr2L_24_8345001 chr2L_8345001 RAL-301_125b 503 chr2L 8351536 8351577 chr2L 8351663 8351704 16 127 7.5 17.5 12.5 1.2 168 chr2L 8351536 intergenic CG7778 + chr2L 8351620 intergenic not near genes chr2L 8351704 intergenic Mur29B + chr2L_16_8350001 chr2L_8350001 RAL-301_125b 504 chr2L 8411745 8411807 chr2L 8411946 8412009 15 201 15.0 8.0 11.5 1.2 264 chr2L 8411745 5` UTR CG13397 - chr2L 8411877 intergenic CG13397 -,CG13398 - chr2L 8412009 intergenic CG13398 -,CG13397 - chr2L_15_8410001 chr2L_8410001 RAL-301_125b 505 chr2L 8452387 8452436 chr2L 8461608 8461657 roo 26 9219 11.0 14.5 12.8 1.9 9270 chr2L 8452387 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461657 intron fu12 - chr2L_26_8455001 chr2L_8455001 RAL-301_125b 506 chr2L 8498158 8498239 chr2L 8498289 8498370 32 131 20.0 19.0 19.5 1.6 212 chr2L 8498158 intron Dh31 - chr2L 8498264 intron Dh31 - chr2L 8498370 intron Dh31 - chr2L_32_8495001 chr2L_8495001 RAL-301_125b 507 chr2L 8502623 8502682 chr2L 8502757 8502816 15 133 29.0 19.0 24.0 0.6 193 chr2L 8502623 intron Dh31 - chr2L 8502720 intron Dh31 - chr2L 8502816 intron Dh31 - chr2L_15_8500001 chr2L_8500001 RAL-301_125b 508 chr2L 8507401 8507466 chr2L 8507533 8507598 21 132 15.0 14.5 14.8 1.3 197 chr2L 8507401 intergenic not near genes chr2L 8507500 intergenic not near genes chr2L 8507598 intergenic not near genes chr2L_21_8505001 chr2L_8505001 RAL-301_125b 509 chr2L 8508970 8509004 chr2L 8509122 8509156 5 152 26.0 27.5 26.8 0.2 186 chr2L 8508970 intergenic CG13096 - chr2L 8509063 intergenic CG13096 - chr2L 8509156 3` UTR CG13096 - chr2L_5_8505001 chr2L_8505001 RAL-301_125b 510 chr2L 8538126 8538194 chr2L 8538252 8538330 6 133 14.0 11.0 12.5 0.4 204 chr2L 8538126 intron CG17834 + chr2L 8538228 intron CG17834 + chr2L 8538330 intron CG17834 + chr2L_6_8535001 chr2L_8535001 RAL-301_125b 511 chr2L 8551394 8551432 chr2L 8551659 8551697 14 265 24.5 20.0 22.2 0.6 303 chr2L 8551394 intron Sema-1a + chr2L 8551546 intron Sema-1a + chr2L 8551697 intron Sema-1a + chr2L_14_8550001 chr2L_8550001 RAL-301_125b 512 chr2L 8580151 8580214 chr2L 8580282 8580345 16 131 35.0 29.5 32.2 0.5 194 chr2L 8580151 intron Sema-1a + chr2L 8580248 intron Sema-1a + chr2L 8580345 intron Sema-1a + chr2L_16_8580001 chr2L_8580001 RAL-301_125b 513 chr2L 8587266 8587308 chr2L 8587395 8587437 8 129 7.5 13.0 10.2 0.7 171 chr2L 8587266 intron Sema-1a + chr2L 8587352 intron Sema-1a + chr2L 8587437 intron Sema-1a + chr2L_8_8585001 chr2L_8585001 RAL-301_125b 514 chr2L 8594434 8594480 chr2L 8601538 8601584 297 11 7104 14.5 5.5 10.0 1.0 7150 chr2L 8594434 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598009 intron Sema-1a + chr2L 8601584 intron Sema-1a + chr2L_11_8595001 chr2L_8595001 RAL-301_125b 515 chr2L 8612814 8612868 chr2L 8612941 8612995 21 128 7.5 12.0 9.8 1.9 181 chr2L 8612814 intron Sema-1a + chr2L 8612904 intron Sema-1a + chr2L 8612995 intron Sema-1a + chr2L_21_8610001 chr2L_8610001 RAL-301_125b 516 chr2L 8616605 8616638 chr2L 8616805 8616838 5 200 21.5 1.0 11.2 0.4 233 chr2L 8616605 intron Sema-1a + chr2L 8616722 intron Sema-1a + chr2L 8616838 intron Sema-1a + chr2L_5_8615001 chr2L_8615001 RAL-301_125b 517 chr2L 8649901 8649961 chr2L 8650040 8650094 13 138 14.5 11.0 12.8 0.9 193 chr2L 8649901 intron Sema-1a + chr2L 8649998 intron Sema-1a + chr2L 8650094 intron Sema-1a + chr2L_13_8645001 chr2L_8645001 RAL-301_125b 518 chr2L 8653057 8653128 chr2L 8653189 8653260 11 132 31.0 32.0 31.5 0.3 203 chr2L 8653057 intron Sema-1a + chr2L 8653158 intron Sema-1a + chr2L 8653260 intron Sema-1a + chr2L_11_8650001 chr2L_8650001 RAL-301_125b 519 chr2L 8687032 8687091 chr2L 8687186 8687245 23 154 18.0 20.5 19.2 1.1 213 chr2L 8687032 exon Trs23 + chr2L 8687138 intergenic Trs23 +,Hnf4 - chr2L 8687245 3` UTR Hnf4 - chr2L_23_8685001 chr2L_8685001 RAL-301_125b 520 chr2L 8698278 8698321 chr2L 8698467 8698510 6 189 42.0 31.5 36.8 0.2 232 chr2L 8698278 intron Hnf4 - chr2L 8698394 intron Hnf4 - chr2L 8698510 intron Hnf4 - chr2L_6_8695001 chr2L_8695001 RAL-301_125b 521 chr2L 8723071 8723140 chr2L 8731498 8731567 Tirant 37 8427 5.0 6.5 5.8 5.4 8496 chr2L 8723071 intron raw - chr2L 8727319 intron raw - chr2L 8731567 intron raw - chr2L_37_8725001 chr2L_8725001 RAL-301_125b 522 chr2L 8746138 8746196 chr2L 8746266 8746321 22 132 16.0 18.5 17.2 1.2 183 chr2L 8746138 intergenic not near genes chr2L 8746230 intergenic not near genes chr2L 8746321 intergenic not near genes chr2L_22_8745001 chr2L_8745001 RAL-301_125b 523 chr2L 8772745 8772820 chr2L 8772880 8772959 15 137 14.5 10.5 12.5 1.1 214 chr2L 8772745 intergenic CG9466 -,CG9465 - chr2L 8772852 intergenic CG9466 - chr2L 8772959 3` UTR CG9466 - chr2L_15_8770001 chr2L_8770001 RAL-301_125b 524 chr2L 8784667 8784722 chr2L 8784819 8784874 8 152 28.5 26.0 27.2 0.3 207 chr2L 8784667 intergenic not near genes chr2L 8784770 intergenic not near genes chr2L 8784874 intergenic not near genes chr2L_8_8780001 chr2L_8780001 RAL-301_125b 525 chr2L 8788729 8788776 chr2L 8788868 8788917 8 141 17.0 25.5 21.2 0.4 188 chr2L 8788729 intergenic not near genes chr2L 8788823 intergenic not near genes chr2L 8788917 intergenic not near genes chr2L_8_8785001 chr2L_8785001 RAL-301_125b 526 chr2L 8799762 8799820 chr2L 8799925 8799986 19 165 20.0 21.5 20.8 0.9 224 chr2L 8799762 intergenic not near genes chr2L 8799874 intergenic not near genes chr2L 8799986 intergenic not near genes chr2L_19_8795001 chr2L_8795001 RAL-301_125b 527 chr2L 8834043 8834069 chr2L 8834174 8834203 5 133 15.0 11.5 13.2 0.4 160 chr2L 8834043 intergenic not near genes chr2L 8834123 intergenic not near genes chr2L 8834203 intergenic not near genes chr2L_5_8830001 chr2L_8830001 RAL-301_125b 528 chr2L 8857965 8857996 chr2L 8858063 8858107 6 110 27.0 29.5 28.2 0.2 142 chr2L 8857965 intergenic not near genes chr2L 8858036 intergenic not near genes chr2L 8858107 intergenic not near genes chr2L_6_8855001 chr2L_8855001 RAL-301_125b 529 chr2L 8902417 8902471 chr2L 8902614 8902668 15 197 35.5 30.0 32.8 0.4 251 chr2L 8902417 intron CG34398 + chr2L 8902542 intron CG34398 + chr2L 8902668 intron CG34398 + chr2L_15_8900001 chr2L_8900001 RAL-301_125b 530 chr2L 8939625 8939689 chr2L 8939755 8939819 29 130 14.0 26.0 20.0 1.4 194 chr2L 8939625 3` UTR Tsp29Fb + chr2L 8939722 3` UTR Tsp29Fb + chr2L 8939819 3` UTR CG9510 - chr2L_29_8935001 chr2L_8935001 RAL-301_125b 531 chr2L 8956185 8956244 chr2L 8956312 8956376 12 129 6.0 5.5 5.8 1.8 191 chr2L 8956185 intron CG31886 - chr2L 8956280 intron CG31886 - chr2L 8956376 intron CG31886 - chr2L_12_8955001 chr2L_8955001 RAL-301_125b 532 chr2L 8976091 8976104 chr2L 8976577 8976590 6 486 0.0 15.5 7.8 0.7 499 chr2L 8976091 intergenic not near genes chr2L 8976340 intergenic not near genes chr2L 8976590 intergenic not near genes chr2L_6_8975001 chr2L_8975001 RAL-301_125b 533 chr2L 9000235 9000312 chr2L 9007795 9007898 roo 25 7563 8.0 5.5 6.8 3.2 7663 chr2L 9000235 intergenic Try29F + chr2L 9004066 intergenic not near genes chr2L 9007898 intergenic not near genes chr2L_25_9000001 chr2L_9000001 RAL-301_125b 534 chr2L 9025489 9025554 chr2L 9025616 9025681 23 127 20.5 17.0 18.8 1.2 192 chr2L 9025489 intron CG9582 - chr2L 9025585 intron CG9582 - chr2L 9025681 intron,3` UTR CG9582 -,CR44352 - chr2L_23_9025001 chr2L_9025001 RAL-301_125b 535 chr2L 9025794 9025847 chr2L 9025927 9025981 10 134 18.0 21.5 19.8 0.5 187 chr2L 9025794 intron,3` UTR CG9582 -,CR44352 - chr2L 9025888 intron,3` UTR CG9582 -,CR44352 - chr2L 9025981 intron,3` UTR CG9582 -,CR44352 - chr2L_10_9025001 chr2L_9025001 RAL-301_125b 536 chr2L 9031339 9031400 chr2L 9031472 9031527 13 131 3.0 0.0 1.5 5.2 188 chr2L 9031339 intron,intron CG9582 -,CR44352 - chr2L 9031433 intron,intron CG9582 -,CR44352 - chr2L 9031527 intron,intron CG9582 -,CR44352 - chr2L_13_9030001 chr2L_9030001 RAL-301_125b 537 chr2L 9039991 9040055 chr2L 9040126 9040192 16 136 10.0 8.0 9.0 1.6 201 chr2L 9039991 intergenic not near genes chr2L 9040092 intergenic not near genes chr2L 9040192 intergenic not near genes chr2L_16_9040001 chr2L_9040001 RAL-301_125b 538 chr2L 9040843 9040912 chr2L 9040969 9041038 20 126 17.0 15.0 16.0 1.2 195 chr2L 9040843 intergenic not near genes chr2L 9040940 intergenic not near genes chr2L 9041038 intergenic not near genes chr2L_20_9040001 chr2L_9040001 RAL-301_125b 539 chr2L 9042513 9042588 chr2L 9042670 9042732 13 152 0.0 12.0 6.0 1.9 219 chr2L 9042513 intergenic not near genes chr2L 9042622 intergenic not near genes chr2L 9042732 intergenic not near genes chr2L_13_9040001 chr2L_9040001 RAL-301_125b 540 chr2L 9058834 9058844 chr2L 9058969 9058979 4 135 19.0 12.0 15.5 0.2 145 chr2L 9058834 intron CG31708 - chr2L 9058906 intron CG31708 - chr2L 9058979 intron CG31708 - chr2L_4_9055001 chr2L_9055001 RAL-301_125b 541 chr2L 9068133 9068174 chr2L 9068260 9068301 8 127 17.0 20.5 18.8 0.4 168 chr2L 9068133 intron CG31708 - chr2L 9068217 intron CG31708 - chr2L 9068301 intron CG31708 - chr2L_8_9065001 chr2L_9065001 RAL-301_125b 542 chr2L 9084336 9084340 chr2L 16217660 16217660 10 7133321 35.5 34.5 35.0 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-301_125b 543 chr2L 9095531 9095586 chr2L 9095667 9095723 12 136 25.0 32.0 28.5 0.4 192 chr2L 9095531 intergenic not near genes chr2L 9095627 intergenic not near genes chr2L 9095723 intergenic not near genes chr2L_12_9095001 chr2L_9095001 RAL-301_125b 544 chr2L 9109656 9109670 chr2L 9109791 9109805 4 135 20.5 7.0 13.8 0.3 149 chr2L 9109656 intergenic not near genes chr2L 9109730 intergenic not near genes chr2L 9109805 intergenic not near genes chr2L_4_9105001 chr2L_9105001 RAL-301_125b 545 chr2L 9109672 9109706 chr2L 9109787 9109814 5 120 15.0 7.0 11.0 0.4 142 chr2L 9109672 intergenic not near genes chr2L 9109743 intergenic not near genes chr2L 9109814 intergenic not near genes chr2L_5_9105001 chr2L_9105001 RAL-301_125b 546 chr2L 9121720 9121739 chr2L 9121866 9121885 6 146 21.5 33.0 27.2 0.2 165 chr2L 9121720 3` UTR CR44616 - chr2L 9121802 3` UTR CR44616 - chr2L 9121885 3` UTR CR44616 - chr2L_6_9120001 chr2L_9120001 RAL-301_125b 547 chr2L 9156517 9156580 chr2L 9156640 9156706 20 122 21.5 22.5 22.0 0.9 189 chr2L 9156517 exon CG32982 + chr2L 9156612 intron CG32982 + chr2L 9156706 intron CG32982 + chr2L_20_9155001 chr2L_9155001 RAL-301_125b 548 chr2L 9158746 9158769 chr2L 9158893 9158916 7 147 21.0 7.5 14.2 0.5 170 chr2L 9158746 intron CG32982 + chr2L 9158831 intron CG32982 + chr2L 9158916 intron CG32982 + chr2L_7_9155001 chr2L_9155001 RAL-301_125b 549 chr2L 9162757 9162765 chr2L 9162936 9162944 4 179 17.5 9.0 13.2 0.3 187 chr2L 9162757 intron CG32982 + chr2L 9162850 intron CG32982 + chr2L 9162944 intron CG32982 + chr2L_4_9160001 chr2L_9160001 RAL-301_125b 550 chr2L 9195828 9195881 chr2L 9195961 9196014 9 132 25.5 22.5 24.0 0.4 186 chr2L 9195828 intron tai + chr2L 9195921 intron tai + chr2L 9196014 intron tai + chr2L_9_9195001 chr2L_9195001 RAL-301_125b 551 chr2L 9217928 9218002 chr2L 9222765 9222847 Doc 29 4836 8.0 8.5 8.2 3.2 4919 chr2L 9217928 intron tai + chr2L 9220388 intron tai + chr2L 9222847 intron tai + chr2L_29_9220001 chr2L_9220001 RAL-301_125b 552 chr2L 9225805 9225873 chr2L 9225945 9226013 15 140 25.0 15.0 20.0 0.7 208 chr2L 9225805 intron tai + chr2L 9225909 intron tai + chr2L 9226013 intron tai + chr2L_15_9225001 chr2L_9225001 RAL-301_125b 553 chr2L 9227176 9227403 chr2L 9227309 9227543 38 137 15.0 23.0 19.0 1.9 367 chr2L 9227176 intron tai + chr2L 9227360 intron tai + chr2L 9227543 intron tai + chr2L_38_9225001 chr2L_9225001 RAL-301_125b 554 chr2L 9259197 9259233 chr2L 9259311 9259376 16 129 20.5 13.0 16.8 0.9 179 chr2L 9259197 intron Ggamma30A + chr2L 9259286 intron Ggamma30A + chr2L 9259376 intron Ggamma30A + chr2L_16_9255001 chr2L_9255001 RAL-301_125b 555 chr2L 9268158 9268223 chr2L 9268284 9268345 10 125 24.5 21.5 23.0 0.4 187 chr2L 9268158 intron Ggamma30A + chr2L 9268252 intron Ggamma30A + chr2L 9268345 intron Ggamma30A + chr2L_10_9265001 chr2L_9265001 RAL-301_125b 556 chr2L 9279938 9280012 chr2L 9280082 9280156 19 144 6.0 7.0 6.5 2.5 218 chr2L 9279938 intron Ggamma30A + chr2L 9280047 intron Ggamma30A + chr2L 9280156 intron Ggamma30A + chr2L_19_9280001 chr2L_9280001 RAL-301_125b 557 chr2L 9283161 9283181 chr2L 9283287 9283308 15 126 15.0 8.5 11.8 1.2 147 chr2L 9283161 intron Ggamma30A + chr2L 9283234 intron Ggamma30A + chr2L 9283308 intron Ggamma30A + chr2L_15_9280001 chr2L_9280001 RAL-301_125b 558 chr2L 9284981 9285035 chr2L 9285107 9285140 16 120 16.0 14.0 15.0 1.0 159 chr2L 9284981 intron Ggamma30A + chr2L 9285060 intron Ggamma30A + chr2L 9285140 intron Ggamma30A + chr2L_16_9285001 chr2L_9285001 RAL-301_125b 559 chr2L 9287277 9287348 chr2L 9287424 9287495 24 146 8.5 2.5 5.5 3.7 218 chr2L 9287277 intron Ggamma30A + chr2L 9287386 intron Ggamma30A + chr2L 9287495 intron Ggamma30A + chr2L_24_9285001 chr2L_9285001 RAL-301_125b 560 chr2L 9290724 9290753 chr2L 9290851 9290880 14 126 12.0 0.0 6.0 2.0 156 chr2L 9290724 intron Ggamma30A + chr2L 9290802 intron Ggamma30A + chr2L 9290880 intron Ggamma30A + chr2L_14_9290001 chr2L_9290001 RAL-301_125b 561 chr2L 9297328 9297404 chr2L 9297455 9297520 20 126 28.0 25.0 26.5 0.7 192 chr2L 9297328 3` UTR Ggamma30A + chr2L 9297424 3` UTR Ggamma30A + chr2L 9297520 3` UTR Ggamma30A + chr2L_20_9295001 chr2L_9295001 RAL-301_125b 562 chr2L 9301153 9301207 chr2L 9301534 9301572 14 377 10.5 15.0 12.8 1.0 419 chr2L 9301153 3` UTR Ggamma30A + chr2L 9301362 3` UTR Ggamma30A + chr2L 9301572 3` UTR Ggamma30A + chr2L_14_9300001 chr2L_9300001 RAL-301_125b 563 chr2L 9303176 9303193 chr2L 9303310 9303327 6 134 38.0 29.0 33.5 0.2 151 chr2L 9303176 intergenic not near genes chr2L 9303252 intergenic not near genes chr2L 9303327 intergenic not near genes chr2L_6_9300001 chr2L_9300001 RAL-301_125b 564 chr2L 9303194 9303474 chr2L 9303309 9303604 11 131 42.5 29.0 35.8 0.3 410 chr2L 9303194 intergenic not near genes chr2L 9303399 intergenic not near genes chr2L 9303604 intergenic not near genes chr2L_11_9300001 chr2L_9300001 RAL-301_125b 565 chr2L 9303489 9303542 chr2L 9303619 9303672 9 130 36.0 33.0 34.5 0.3 183 chr2L 9303489 intergenic not near genes chr2L 9303580 intergenic not near genes chr2L 9303672 intergenic not near genes chr2L_9_9300001 chr2L_9300001 RAL-301_125b 566 chr2L 9322767 9322834 chr2L 9322893 9322960 22 126 6.5 12.5 9.5 2.1 193 chr2L 9322767 intergenic not near genes chr2L 9322864 intergenic not near genes chr2L 9322960 intergenic not near genes chr2L_22_9320001 chr2L_9320001 RAL-301_125b 567 chr2L 9339359 9339388 chr2L 9339500 9339529 7 141 30.5 35.0 32.8 0.2 170 chr2L 9339359 intron Eaat1 + chr2L 9339444 intron Eaat1 + chr2L 9339529 exon Eaat1 + chr2L_7_9335001 chr2L_9335001 RAL-301_125b 568 chr2L 9362098 9362151 chr2L 9362226 9362279 19 126 20.5 18.0 19.2 0.9 181 chr2L 9362098 intergenic not near genes chr2L 9362188 intergenic not near genes chr2L 9362279 intergenic not near genes chr2L_19_9360001 chr2L_9360001 RAL-301_125b 569 chr2L 9364281 9364329 chr2L 9364430 9364471 5 148 12.5 20.0 16.2 0.3 190 chr2L 9364281 intergenic CR43404 + chr2L 9364376 intron CR43404 + chr2L 9364471 5` UTR CR43404 + chr2L_5_9360001 chr2L_9360001 RAL-301_125b 570 chr2L 9380196 9380254 chr2L 9380341 9380400 14 145 9.0 7.0 8.0 1.6 204 chr2L 9380196 exon Shawl - chr2L 9380298 intron Shawl - chr2L 9380400 intron Shawl - chr2L_14_9380001 chr2L_9380001 RAL-301_125b 571 chr2L 9387203 9387278 chr2L 9387351 9387426 25 147 5.0 6.0 5.5 3.8 223 chr2L 9387203 intron Shawl - chr2L 9387314 intron Shawl - chr2L 9387426 intron,5` UTR Shawl -,Aldh + chr2L_25_9385001 chr2L_9385001 RAL-301_125b 572 chr2L 9393450 9393521 chr2L 9396467 9396538 jockey 30 3016 7.5 12.5 10.0 2.7 3088 chr2L 9393450 intron Shawl - chr2L 9394994 intron Shawl - chr2L 9396538 intron Shawl - chr2L_30_9390001 chr2L_9390001 RAL-301_125b 573 chr2L 9428461 9428535 chr2L 9428590 9428664 18 129 14.5 18.5 16.5 1.0 203 chr2L 9428461 exon CG42847 + chr2L 9428562 3` UTR CG42847 + chr2L 9428664 3` UTR CG42847 + chr2L_18_9425001 chr2L_9425001 RAL-301_125b 574 chr2L 9439575 9439636 chr2L 9439703 9439747 4 124 25.5 27.0 26.2 0.1 172 chr2L 9439575 intron numb + chr2L 9439661 intron numb + chr2L 9439747 intron numb + chr2L_4_9435001 chr2L_9435001 RAL-301_125b 575 chr2L 9439902 9439933 chr2L 9440041 9440072 4 139 23.5 20.5 22.0 0.2 170 chr2L 9439902 intron numb + chr2L 9439987 intron numb + chr2L 9440072 intron,exon numb +,CG33723 - chr2L_4_9435001 chr2L_9435001 RAL-301_125b 576 chr2L 9446274 9446293 chr2L 9446426 9446427 5 148 0.0 0.0 0.0 5.0 153 chr2L 9446274 intron numb + chr2L 9446350 intron numb + chr2L 9446427 intron numb + chr2L_5_9445001 chr2L_9445001 RAL-301_125b 577 chr2L 9454941 9454991 chr2L 9455093 9455145 9 153 32.0 27.5 29.8 0.3 204 chr2L 9454941 intron numb + chr2L 9455043 intron numb + chr2L 9455145 intron numb + chr2L_9_9455001 chr2L_9455001 RAL-301_125b 578 chr2L 9456892 9457099 chr2L 9457023 9457226 21 127 29.0 21.5 25.2 0.8 334 chr2L 9456892 intron numb + chr2L 9457059 intron numb + chr2L 9457226 intron numb + chr2L_21_9455001 chr2L_9455001 RAL-301_125b 579 chr2L 9463718 9463766 chr2L 9463853 9463901 15 134 14.0 18.5 16.2 0.9 183 chr2L 9463718 intergenic not near genes chr2L 9463810 intergenic not near genes chr2L 9463901 intergenic not near genes chr2L_15_9460001 chr2L_9460001 RAL-301_125b 580 chr2L 9474734 9474808 chr2L 9474878 9474952 37 144 16.0 21.0 18.5 1.9 218 chr2L 9474734 intergenic not near genes chr2L 9474843 intergenic not near genes chr2L 9474952 intergenic not near genes chr2L_37_9470001 chr2L_9470001 RAL-301_125b 581 chr2L 9488530 9488536 chr2L 9488661 9488667 4 131 24.5 10.0 17.2 0.2 137 chr2L 9488530 intergenic not near genes chr2L 9488598 intergenic not near genes chr2L 9488667 intergenic not near genes chr2L_4_9485001 chr2L_9485001 RAL-301_125b 582 chr2L 9488547 9488567 chr2L 9488657 9488687 8 124 19.0 10.0 14.5 0.5 140 chr2L 9488547 intergenic not near genes chr2L 9488617 intergenic not near genes chr2L 9488687 intergenic not near genes chr2L_8_9485001 chr2L_9485001 RAL-301_125b 583 chr2L 9506351 9506388 chr2L 9506489 9506526 16 138 16.5 30.5 23.5 0.7 175 chr2L 9506351 intron CG33298 + chr2L 9506438 intron CG33298 + chr2L 9506526 intron CG33298 + chr2L_16_9505001 chr2L_9505001 RAL-301_125b 584 chr2L 9509764 9509839 chr2L 9509895 9509970 30 131 17.0 17.5 17.2 1.6 206 chr2L 9509764 intron CG33298 + chr2L 9509867 intron CG33298 + chr2L 9509970 intron CG33298 + chr2L_30_9505001 chr2L_9505001 RAL-301_125b 585 chr2L 9527275 9527303 chr2L 9527407 9527435 11 132 25.0 19.0 22.0 0.5 160 chr2L 9527275 intron Oatp30B + chr2L 9527355 intron Oatp30B + chr2L 9527435 intron Oatp30B + chr2L_11_9525001 chr2L_9525001 RAL-301_125b 586 chr2L 9556852 9556917 chr2L 9556992 9557052 26 131 15.5 23.5 19.5 1.3 200 chr2L 9556852 intron jp - chr2L 9556952 intron jp - chr2L 9557052 intron jp - chr2L_26_9555001 chr2L_9555001 RAL-301_125b 587 chr2L 9561960 9562035 chr2L 9562199 9562274 12 238 24.0 20.0 22.0 0.5 314 chr2L 9561960 intron jp - chr2L 9562117 intron jp - chr2L 9562274 intron jp - chr2L_12_9560001 chr2L_9560001 RAL-301_125b 588 chr2L 9577393 9577451 chr2L 9577532 9577601 15 139 17.0 24.0 20.5 0.7 208 chr2L 9577393 intergenic not near genes chr2L 9577497 intergenic not near genes chr2L 9577601 intergenic not near genes chr2L_15_9575001 chr2L_9575001 RAL-301_125b 589 chr2L 9613791 9613855 chr2L 9613999 9614008 19 216 17.0 18.0 17.5 1.0 217 chr2L 9613791 intron Trx-2 + chr2L 9613900 intron Trx-2 + chr2L 9614008 intron Trx-2 + chr2L_19_9610001 chr2L_9610001 RAL-301_125b 590 chr2L 9672018 9672030 chr2L 9672153 9672160 5 134 14.5 0.0 7.2 0.6 142 chr2L 9672018 intergenic not near genes chr2L 9672089 intergenic not near genes chr2L 9672160 intergenic not near genes chr2L_5_9670001 chr2L_9670001 RAL-301_125b 591 chr2L 9685595 9685614 chr2L 9685722 9685741 13 127 10.5 12.5 11.5 1.0 146 chr2L 9685595 intron Pka-C1 - chr2L 9685668 intron Pka-C1 - chr2L 9685741 intron Pka-C1 - chr2L_13_9685001 chr2L_9685001 RAL-301_125b 592 chr2L 9687889 9687961 chr2L 9688071 9688143 11 177 7.0 12.0 9.5 1.0 254 chr2L 9687889 intron Pka-C1 - chr2L 9688016 intron Pka-C1 - chr2L 9688143 intron Pka-C1 - chr2L_11_9685001 chr2L_9685001 RAL-301_125b 593 chr2L 9716424 9716449 chr2L 9716555 9716587 5 137 26.5 27.0 26.8 0.2 163 chr2L 9716424 3` UTR Nckx30C - chr2L 9716506 3` UTR Nckx30C - chr2L 9716587 3` UTR Nckx30C - chr2L_5_9715001 chr2L_9715001 RAL-301_125b 594 chr2L 9719736 9719780 chr2L 9719869 9719913 16 133 0.5 5.0 2.8 4.2 177 chr2L 9719736 intron Nckx30C - chr2L 9719824 intron Nckx30C - chr2L 9719913 intron Nckx30C - chr2L_16_9715001 chr2L_9715001 RAL-301_125b 595 chr2L 9730959 9731002 chr2L 9731092 9731135 5 132 8.0 15.0 11.5 0.4 176 chr2L 9730959 intron Nckx30C - chr2L 9731047 intron Nckx30C - chr2L 9731135 intron Nckx30C - chr2L_5_9730001 chr2L_9730001 RAL-301_125b 596 chr2L 9756714 9756784 chr2L 9756872 9756942 33 156 26.0 16.0 21.0 1.5 228 chr2L 9756714 intergenic not near genes chr2L 9756828 intergenic not near genes chr2L 9756942 intergenic not near genes chr2L_33_9755001 chr2L_9755001 RAL-301_125b 597 chr2L 9770718 9770787 chr2L 9770871 9770940 1360 18 152 18.5 18.5 18.5 0.9 222 chr2L 9770718 intron ppk18 - chr2L 9770829 intron ppk18 - chr2L 9770940 exon ppk18 - chr2L_18_9770001 chr2L_9770001 RAL-301_125b 598 chr2L 9775942 9776003 chr2L 9776074 9776135 25 132 5.5 9.0 7.2 3.0 193 chr2L 9775942 intergenic not near genes chr2L 9776038 intergenic not near genes chr2L 9776135 intergenic not near genes chr2L_25_9775001 chr2L_9775001 RAL-301_125b 599 chr2L 9837382 9837447 chr2L 9837510 9837575 27 128 5.5 3.0 4.2 5.2 193 chr2L 9837382 intron nAChRalpha6 - chr2L 9837478 intron nAChRalpha6 - chr2L 9837575 intron nAChRalpha6 - chr2L_27_9835001 chr2L_9835001 RAL-301_125b 600 chr2L 9862340 9862358 chr2L 9862498 9862516 10 158 0.0 19.0 9.5 1.0 176 chr2L 9862340 intron nAChRalpha6 - chr2L 9862428 intron nAChRalpha6 - chr2L 9862516 intron nAChRalpha6 - chr2L_10_9860001 chr2L_9860001 RAL-301_125b 601 chr2L 9871504 9871530 chr2L 9871645 9871671 10 138 4.0 0.0 2.0 3.3 167 chr2L 9871504 intron nAChRalpha6 - chr2L 9871588 intron nAChRalpha6 - chr2L 9871671 intron nAChRalpha6 - chr2L_10_9870001 chr2L_9870001 RAL-301_125b 602 chr2L 9892455 9892531 chr2L 9892581 9892657 24 125 24.0 27.5 25.8 0.9 202 chr2L 9892455 exon mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892657 exon mtDNA-helicase - chr2L_24_9890001 chr2L_9890001 RAL-301_125b 603 chr2L 9905472 9905526 chr2L 9905631 9905685 11 159 24.0 22.5 23.2 0.5 213 chr2L 9905472 intron CG13124 - chr2L 9905578 intron CG13124 - chr2L 9905685 intron CG13124 - chr2L_11_9905001 chr2L_9905001 RAL-301_125b 604 chr2L 9920323 9920367 chr2L 9920692 9920736 6 369 15.0 22.0 18.5 0.3 413 chr2L 9920323 intron CG4594 + chr2L 9920530 exon CG4594 + chr2L 9920736 exon CG4594 + chr2L_6_9920001 chr2L_9920001 RAL-301_125b 605 chr2L 9973684 9973752 chr2L 9980853 9980921 HMS-Beagle 31 7168 7.0 11.0 9.0 3.1 7237 chr2L 9973684 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980921 intergenic not near genes chr2L_31_9975001 chr2L_9975001 RAL-301_125b 606 chr2L 9982197 9982230 chr2L 9982350 9982383 18 153 10.0 25.5 17.8 1.0 186 chr2L 9982197 intergenic not near genes chr2L 9982290 intergenic not near genes chr2L 9982383 intergenic not near genes chr2L_18_9980001 chr2L_9980001 RAL-301_125b 607 chr2L 9986307 9986347 chr2L 9986452 9986459 7 138 28.0 25.5 26.8 0.3 152 chr2L 9986307 intron bib + chr2L 9986383 intron bib + chr2L 9986459 intron bib + chr2L_7_9985001 chr2L_9985001 RAL-301_125b 608 chr2L 9986366 9986373 chr2L 9986458 9986518 4 120 27.5 25.5 26.5 0.1 152 chr2L 9986366 intron bib + chr2L 9986442 intron bib + chr2L 9986518 intron bib + chr2L_4_9985001 chr2L_9985001 RAL-301_125b 609 chr2L 10023029 10023060 chr2L 10023159 10023195 11 134 25.5 13.5 19.5 0.5 166 chr2L 10023029 intergenic not near genes chr2L 10023112 intergenic not near genes chr2L 10023195 intergenic not near genes chr2L_11_10020001 chr2L_10020001 RAL-301_125b 610 chr2L 10023063 10023100 chr2L 10023158 10023235 13 127 15.5 13.5 14.5 0.8 172 chr2L 10023063 intergenic not near genes chr2L 10023149 intergenic not near genes chr2L 10023235 intergenic not near genes chr2L_13_10020001 chr2L_10020001 RAL-301_125b 611 chr2L 10030025 10030034 chr2L 10030172 10030181 8 147 1.0 10.5 5.8 1.2 156 chr2L 10030025 intergenic not near genes chr2L 10030103 intergenic not near genes chr2L 10030181 intergenic not near genes chr2L_8_10030001 chr2L_10030001 RAL-301_125b 612 chr2L 10030035 10030067 chr2L 10030168 10030200 4 136 1.0 10.0 5.5 0.6 165 chr2L 10030035 intergenic not near genes chr2L 10030118 intergenic not near genes chr2L 10030200 intergenic not near genes chr2L_4_10030001 chr2L_10030001 RAL-301_125b 613 chr2L 10043168 10043202 chr2L 10043296 10043330 11 128 18.0 20.0 19.0 0.6 162 chr2L 10043168 intergenic not near genes chr2L 10043249 intergenic not near genes chr2L 10043330 intergenic not near genes chr2L_11_10040001 chr2L_10040001 RAL-301_125b 614 chr2L 10045363 10045424 chr2L 10045493 10045554 17 125 10.0 9.5 9.8 1.6 191 chr2L 10045363 intergenic not near genes chr2L 10045458 intergenic not near genes chr2L 10045554 intergenic not near genes chr2L_17_10045001 chr2L_10045001 RAL-301_125b 615 chr2L 10051683 10051694 chr2L 10051818 10051819 4 132 23.5 12.0 17.8 0.2 136 chr2L 10051683 5` UTR CR44874 + chr2L 10051751 5` UTR CR44874 + chr2L 10051819 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-301_125b 616 chr2L 10051698 10051753 chr2L 10051813 10051829 12 113 11.5 12.5 12.0 0.9 131 chr2L 10051698 5` UTR CR44874 + chr2L 10051764 5` UTR CR44874 + chr2L 10051829 5` UTR CR44874 + chr2L_12_10050001 chr2L_10050001 RAL-301_125b 617 chr2L 10076968 10076983 chr2L 10077097 10077110 6 129 17.0 10.0 13.5 0.4 142 chr2L 10076968 intron CG44153 - chr2L 10077039 intron CG44153 - chr2L 10077110 intron CG44153 - chr2L_6_10075001 chr2L_10075001 RAL-301_125b 618 chr2L 10087430 10087477 chr2L 10087557 10087604 19 124 17.5 20.0 18.8 1.0 174 chr2L 10087430 intron CG44153 - chr2L 10087517 intron CG44153 - chr2L 10087604 intron CG44153 - chr2L_19_10085001 chr2L_10085001 RAL-301_125b 619 chr2L 10095586 10095659 chr2L 10095716 10095789 14 129 31.5 33.0 32.2 0.4 203 chr2L 10095586 intron CG44153 - chr2L 10095688 intron CG44153 - chr2L 10095789 intron CG44153 - chr2L_14_10095001 chr2L_10095001 RAL-301_125b 620 chr2L 10114947 10115004 chr2L 10115081 10115138 17 134 9.0 12.0 10.5 1.5 191 chr2L 10114947 intron,intron CG44153 -,CG34109 + chr2L 10115042 intron,intron CG44153 -,CG34109 + chr2L 10115138 intron,intron CG44153 -,CG34109 + chr2L_17_10115001 chr2L_10115001 RAL-301_125b 621 chr2L 10138139 10138193 chr2L 10143435 10143489 Rt1c 17 5296 8.0 9.0 8.5 1.8 5350 chr2L 10138139 intron CG44153 - chr2L 10140814 intron CG44153 - chr2L 10143489 intron CG44153 - chr2L_17_10140001 chr2L_10140001 RAL-301_125b 622 chr2L 10150368 10150429 chr2L 10150495 10150556 18 126 21.0 15.0 18.0 0.9 188 chr2L 10150368 intron,exon CG44153 -,CG4839 + chr2L 10150462 intron,intron CG44153 -,CG4839 + chr2L 10150556 intron,intron CG44153 -,CG4839 + chr2L_18_10150001 chr2L_10150001 RAL-301_125b 623 chr2L 10153163 10153179 chr2L 10153292 10153308 4 128 16.0 17.5 16.8 0.2 145 chr2L 10153163 intron,exon CG44153 -,CG4839 + chr2L 10153236 intron,intron CG44153 -,CG4839 + chr2L 10153308 intron,intron CG44153 -,CG4839 + chr2L_4_10150001 chr2L_10150001 RAL-301_125b 624 chr2L 10153183 10153232 chr2L 10153288 10153321 14 122 16.0 18.0 17.0 0.8 138 chr2L 10153183 intron,exon CG44153 -,CG4839 + chr2L 10153252 intron,intron CG44153 -,CG4839 + chr2L 10153321 intron,intron CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 RAL-301_125b 625 chr2L 10156284 10156351 chr2L 10163804 10163871 blood 41 7518 6.5 9.5 8.0 4.6 7587 chr2L 10156284 intron,3` UTR CG44153 -,CG4839 + chr2L 10160078 intron CG44153 - chr2L 10163871 intron CG44153 - chr2L_41_10160001 chr2L_10160001 RAL-301_125b 626 chr2L 10176023 10176024 chr2L 16071771 16071771 4 5895748 40.5 29.5 35.0 0.1 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_13120001 chr2L_13120001 RAL-301_125b 627 chr2L 10176515 10176534 chr2L 10176838 10176867 5 331 24.5 17.0 20.8 0.2 352 chr2L 10176515 intron CG44153 - chr2L 10176691 intron CG44153 - chr2L 10176867 intron CG44153 - chr2L_5_10175001 chr2L_10175001 RAL-301_125b 628 chr2L 10176560 10176570 chr2L 10176833 10176903 8 325 20.0 18.0 19.0 0.4 343 chr2L 10176560 intron CG44153 - chr2L 10176732 intron CG44153 - chr2L 10176903 intron CG44153 - chr2L_8_10175001 chr2L_10175001 RAL-301_125b 629 chr2L 10177359 10177394 chr2L 10177489 10177523 14 130 4.0 7.0 5.5 2.2 164 chr2L 10177359 intron CG44153 - chr2L 10177441 intron CG44153 - chr2L 10177523 intron CG44153 - chr2L_14_10175001 chr2L_10175001 RAL-301_125b 630 chr2L 10180541 10180582 chr2L 10180678 10180703 5 131 11.0 8.5 9.8 0.5 162 chr2L 10180541 intergenic CG44153 - chr2L 10180622 intergenic CG44153 - chr2L 10180703 intergenic CG44153 - chr2L_5_10180001 chr2L_10180001 RAL-301_125b 631 chr2L 10276161 10276224 chr2L 10276289 10276352 21 128 18.0 21.5 19.8 1.0 191 chr2L 10276161 intron Utx - chr2L 10276256 intron Utx - chr2L 10276352 intron Utx - chr2L_21_10275001 chr2L_10275001 RAL-301_125b 632 chr2L 10277973 10278044 chr2L 10278103 10278174 14 130 14.0 15.0 14.5 0.9 201 chr2L 10277973 intron Utx - chr2L 10278074 intron Utx - chr2L 10278174 intron Utx - chr2L_14_10275001 chr2L_10275001 RAL-301_125b 633 chr2L 10294630 10294689 chr2L 10294766 10294825 17 135 9.5 6.0 7.8 1.9 195 chr2L 10294630 intron Hand - chr2L 10294728 intron Hand - chr2L 10294825 intron Hand - chr2L_17_10290001 chr2L_10290001 RAL-301_125b 634 chr2L 10314453 10314523 chr2L 10314612 10314682 13 159 14.0 11.5 12.8 0.9 229 chr2L 10314453 intergenic CG5384 -,CG4972 + chr2L 10314568 intergenic CG5384 -,CG4972 + chr2L 10314682 intergenic CG4972 +,CG5384 - chr2L_13_10310001 chr2L_10310001 RAL-301_125b 635 chr2L 10458059 10458080 chr2L 10458370 10458391 8 311 17.5 14.0 15.8 0.5 332 chr2L 10458059 intron LM408 + chr2L 10458225 intron LM408 + chr2L 10458391 intron LM408 + chr2L_8_10455001 chr2L_10455001 RAL-301_125b 636 chr2L 10500007 10500083 chr2L 10500143 10500219 28 136 10.0 16.5 13.2 2.0 212 chr2L 10500007 intron Myo31DF - chr2L 10500113 intron Myo31DF - chr2L 10500219 intron Myo31DF - chr2L_28_10500001 chr2L_10500001 RAL-301_125b 637 chr2L 10531564 10531628 chr2L 10531706 10531770 18 142 0.0 8.5 4.2 3.5 206 chr2L 10531564 3` UTR Lip4 + chr2L 10531667 3` UTR Lip4 + chr2L 10531770 3` UTR Lip4 + chr2L_18_10530001 chr2L_10530001 RAL-301_125b 638 chr2L 10554188 10554254 chr2L 10554330 10554393 5 140 19.0 20.0 19.5 0.2 205 chr2L 10554188 intron Trim9 + chr2L 10554290 intron Trim9 + chr2L 10554393 intron Trim9 + chr2L_5_10550001 chr2L_10550001 RAL-301_125b 639 chr2L 10563868 10563913 chr2L 10564011 10564056 10 141 27.5 32.5 30.0 0.3 188 chr2L 10563868 intron Trim9 + chr2L 10563962 intron Trim9 + chr2L 10564056 intron Trim9 + chr2L_10_10560001 chr2L_10560001 RAL-301_125b 640 chr2L 10580761 10580815 chr2L 10580892 10580946 11 130 26.0 21.0 23.5 0.4 185 chr2L 10580761 intron Trim9 + chr2L 10580854 intron Trim9 + chr2L 10580946 intron Trim9 + chr2L_11_10580001 chr2L_10580001 RAL-301_125b 641 chr2L 10589020 10589081 chr2L 10589146 10589207 16 126 13.0 16.0 14.5 1.0 187 chr2L 10589020 intron Trim9 + chr2L 10589114 intron Trim9 + chr2L 10589207 intron Trim9 + chr2L_16_10585001 chr2L_10585001 RAL-301_125b 642 chr2L 10592797 10592867 chr2L 10600508 10600579 opus 28 7712 7.5 9.5 8.5 2.9 7782 chr2L 10592797 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600579 intron Trim9 + chr2L_28_10595001 chr2L_10595001 RAL-301_125b 643 chr2L 10603191 10603255 chr2L 10603344 10603408 23 152 13.5 18.0 15.8 1.4 217 chr2L 10603191 intron Trim9 + chr2L 10603300 intron Trim9 + chr2L 10603408 intron Trim9 + chr2L_23_10600001 chr2L_10600001 RAL-301_125b 644 chr2L 10603799 10603856 chr2L 10603965 10604037 13 172 14.0 13.5 13.8 0.9 238 chr2L 10603799 intron Trim9 + chr2L 10603918 intron Trim9 + chr2L 10604037 intron Trim9 + chr2L_13_10600001 chr2L_10600001 RAL-301_125b 645 chr2L 10633324 10633376 chr2L 10633461 10633497 6 131 23.5 29.5 26.5 0.2 173 chr2L 10633324 intron CG7329 - chr2L 10633410 intron CG7329 - chr2L 10633497 intron CG7329 - chr2L_6_10630001 chr2L_10630001 RAL-301_125b 646 chr2L 10640595 10640663 chr2L 10640734 10640802 26 138 17.0 18.5 17.8 1.4 207 chr2L 10640595 exon CG31872 + chr2L 10640698 exon CG31872 + chr2L 10640802 exon CG31872 + chr2L_26_10640001 chr2L_10640001 RAL-301_125b 647 chr2L 10656540 10656610 chr2L 10656666 10656736 17 125 26.0 29.0 27.5 0.6 196 chr2L 10656540 intergenic not near genes chr2L 10656638 intergenic not near genes chr2L 10656736 intergenic not near genes chr2L_17_10655001 chr2L_10655001 RAL-301_125b 648 chr2L 10672581 10672608 chr2L 10672951 10672978 8 370 17.0 29.0 23.0 0.3 397 chr2L 10672581 intergenic not near genes chr2L 10672780 intergenic not near genes chr2L 10672978 intergenic not near genes chr2L_8_10670001 chr2L_10670001 RAL-301_125b 649 chr2L 10675728 10675785 chr2L 10676163 10676220 8 435 23.0 30.5 26.8 0.3 492 chr2L 10675728 intergenic not near genes chr2L 10675974 intergenic not near genes chr2L 10676220 intergenic not near genes chr2L_8_10675001 chr2L_10675001 RAL-301_125b 650 chr2L 10688497 10688547 chr2L 10688623 10688673 12 126 36.5 35.5 36.0 0.3 176 chr2L 10688497 intergenic CG7294 - chr2L 10688585 intergenic CG7294 - chr2L 10688673 intergenic CG7294 - chr2L_12_10685001 chr2L_10685001 RAL-301_125b 651 chr2L 10704867 10704948 chr2L 10705012 10705093 11 142 20.0 18.5 19.2 0.5 226 chr2L 10704867 intron,exon Lip2 -,CG6415 + chr2L 10704980 intron Lip2 - chr2L 10705093 exon Lip2 - chr2L_11_10700001 chr2L_10700001 RAL-301_125b 652 chr2L 10705403 10705472 chr2L 10705536 10705605 20 123 12.5 14.0 13.2 1.4 202 chr2L 10705403 exon Lip2 - chr2L 10705504 intron Lip2 - chr2L 10705605 intron Lip2 - chr2L_20_10705001 chr2L_10705001 RAL-301_125b 653 chr2L 10719872 10719892 chr2L 10720014 10720034 6 142 24.0 15.0 19.5 0.3 162 chr2L 10719872 intergenic not near genes chr2L 10719953 intergenic not near genes chr2L 10720034 intergenic not near genes chr2L_6_10715001 chr2L_10715001 RAL-301_125b 654 chr2L 10723490 10723553 chr2L 10723634 10723697 5 144 11.0 14.5 12.8 0.4 207 chr2L 10723490 intergenic not near genes chr2L 10723594 intergenic not near genes chr2L 10723697 intergenic not near genes chr2L_5_10720001 chr2L_10720001 RAL-301_125b 655 chr2L 10727246 10727306 chr2L 10727407 10727467 8 160 21.5 17.0 19.2 0.4 221 chr2L 10727246 intron CG6431 + chr2L 10727356 intron CG6431 + chr2L 10727467 intron CG6431 + chr2L_8_10725001 chr2L_10725001 RAL-301_125b 656 chr2L 10777178 10777205 chr2L 10777340 10777367 6 162 33.0 23.0 28.0 0.2 189 chr2L 10777178 intron CG31869 - chr2L 10777272 intron CG31869 - chr2L 10777367 intron CG31869 - chr2L_6_10775001 chr2L_10775001 RAL-301_125b 657 chr2L 10786779 10786831 chr2L 10786983 10787007 12 202 32.5 18.0 25.2 0.5 228 chr2L 10786779 intron CG31869 - chr2L 10786893 intron CG31869 - chr2L 10787007 intron CG31869 - chr2L_12_10785001 chr2L_10785001 RAL-301_125b 658 chr2L 10787939 10787950 chr2L 10788082 10788082 4 140 28.5 38.5 33.5 0.1 143 chr2L 10787939 intron CG31869 - chr2L 10788010 intron CG31869 - chr2L 10788082 intron CG31869 - chr2L_4_10785001 chr2L_10785001 RAL-301_125b 659 chr2L 10793273 10793343 chr2L 10793400 10793470 23 127 18.5 16.5 17.5 1.2 197 chr2L 10793273 intron CG31869 - chr2L 10793372 intron CG31869 - chr2L 10793470 intron CG31869 - chr2L_23_10790001 chr2L_10790001 RAL-301_125b 660 chr2L 10803722 10803798 chr2L 10803857 10803932 19 131 5.5 8.5 7.0 2.4 210 chr2L 10803722 intergenic not near genes chr2L 10803827 intergenic Nos - chr2L 10803932 intergenic Nos - chr2L_19_10800001 chr2L_10800001 RAL-301_125b 661 chr2L 10813626 10813651 chr2L 10813754 10813779 6 128 31.5 25.0 28.2 0.2 153 chr2L 10813626 intron Nos - chr2L 10813702 intron Nos - chr2L 10813779 intron Nos - chr2L_6_10810001 chr2L_10810001 RAL-301_125b 662 chr2L 10836710 10836780 chr2L 10836839 10836908 27 128 8.0 6.5 7.2 3.3 198 chr2L 10836710 intron Nos - chr2L 10836809 intron Nos - chr2L 10836908 intron Nos - chr2L_27_10835001 chr2L_10835001 RAL-301_125b 663 chr2L 10850947 10850989 chr2L 10851079 10851121 13 132 15.5 15.0 15.2 0.8 174 chr2L 10850947 intron CG43129 + chr2L 10851034 intron CG43129 + chr2L 10851121 intron CG43129 + chr2L_13_10850001 chr2L_10850001 RAL-301_125b 664 chr2L 10852123 10852175 chr2L 10852262 10852314 25 139 11.0 11.5 11.2 2.0 191 chr2L 10852123 intron CG43129 + chr2L 10852218 intron CG43129 + chr2L 10852314 intron CG43129 + chr2L_25_10850001 chr2L_10850001 RAL-301_125b 665 chr2L 10861514 10861536 chr2L 10861644 10861666 9 130 13.0 19.0 16.0 0.5 152 chr2L 10861514 exon Stam + chr2L 10861590 3` UTR Stam + chr2L 10861666 3` UTR Stam + chr2L_9_10860001 chr2L_10860001 RAL-301_125b 666 chr2L 10862790 10862869 chr2L 10864458 10864526 Rt1c 16 1663 6.0 4.0 5.0 2.7 1736 chr2L 10862790 intron CR43807 - chr2L 10863658 intron CR43807 - chr2L 10864526 3` UTR CR43807 - chr2L_16_10860001 chr2L_10860001 RAL-301_125b 667 chr2L 10876525 10876565 chr2L 10883631 10883671 297 14 7106 9.5 12.0 10.8 1.2 7146 chr2L 10876525 intergenic not near genes chr2L 10880098 intergenic not near genes chr2L 10883671 intergenic not near genes chr2L_14_10880001 chr2L_10880001 RAL-301_125b 668 chr2L 10918547 10918573 chr2L 10918689 10918715 8 142 17.0 16.0 16.5 0.5 168 chr2L 10918547 intron dpr2 - chr2L 10918631 intron dpr2 - chr2L 10918715 intron dpr2 - chr2L_8_10915001 chr2L_10915001 RAL-301_125b 669 chr2L 10944414 10944469 chr2L 10944542 10944602 6 131 6.0 7.0 6.5 0.8 188 chr2L 10944414 intron dpr2 - chr2L 10944508 intron dpr2 - chr2L 10944602 intron dpr2 - chr2L_6_10940001 chr2L_10940001 RAL-301_125b 670 chr2L 10946919 10946966 chr2L 10956179 10956231 roo 18 9262 15.0 14.5 14.8 1.1 9312 chr2L 10946919 intron dpr2 - chr2L 10951575 intron dpr2 - chr2L 10956231 intron dpr2 - chr2L_18_10950001 chr2L_10950001 RAL-301_125b 671 chr2L 10970274 10970304 chr2L 10970450 10970480 8 176 30.5 27.0 28.8 0.3 206 chr2L 10970274 intergenic CG33129 -,YL-1 + chr2L 10970377 intergenic YL-1 +,CG33129 - chr2L 10970480 5` UTR YL-1 + chr2L_8_10970001 chr2L_10970001 RAL-301_125b 672 chr2L 11056525 11056593 chr2L 11056657 11056725 12 132 31.5 31.0 31.2 0.4 200 chr2L 11056525 intron Samuel - chr2L 11056625 intron Samuel - chr2L 11056725 intron Samuel - chr2L_12_11055001 chr2L_11055001 RAL-301_125b 673 chr2L 11144532 11144593 chr2L 11144709 11144780 10 186 11.0 21.0 16.0 0.6 248 chr2L 11144532 intron Gyc32E - chr2L 11144656 intron,3` UTR Gyc32E -,CG31867 - chr2L 11144780 intron,exon Gyc32E -,CG31867 - chr2L_10_11140001 chr2L_11140001 RAL-301_125b 674 chr2L 11146453 11146530 chr2L 11146581 11146658 6 128 13.5 8.0 10.8 0.5 205 chr2L 11146453 intron Gyc32E - chr2L 11146556 intron Gyc32E - chr2L 11146658 intron Gyc32E - chr2L_6_11145001 chr2L_11145001 RAL-301_125b 675 chr2L 11169516 11169584 chr2L 11169650 11169716 9 132 17.5 18.0 17.8 0.5 200 chr2L 11169516 intron Ca-beta - chr2L 11169616 intron Ca-beta - chr2L 11169716 intron Ca-beta - chr2L_9_11165001 chr2L_11165001 RAL-301_125b 676 chr2L 11174585 11174659 chr2L 11174715 11174786 11 118 17.5 17.0 17.2 0.6 201 chr2L 11174585 intron Ca-beta - chr2L 11174686 intron Ca-beta - chr2L 11174786 intron Ca-beta - chr2L_11_11170001 chr2L_11170001 RAL-301_125b 677 chr2L 11183734 11183808 chr2L 11183874 11183954 16 144 3.0 1.0 2.0 5.3 220 chr2L 11183734 intron Ca-beta - chr2L 11183844 intron Ca-beta - chr2L 11183954 intron Ca-beta - chr2L_16_11180001 chr2L_11180001 RAL-301_125b 678 chr2L 11189197 11189223 chr2L 11189344 11189370 7 147 20.0 7.5 13.8 0.5 173 chr2L 11189197 intron Ca-beta - chr2L 11189284 intron Ca-beta - chr2L 11189370 intron Ca-beta - chr2L_7_11185001 chr2L_11185001 RAL-301_125b 679 chr2L 11224044 11224084 chr2L 11224205 11224245 11 161 10.0 23.5 16.8 0.6 201 chr2L 11224044 intron ab + chr2L 11224144 intron ab + chr2L 11224245 intron ab + chr2L_11_11220001 chr2L_11220001 RAL-301_125b 680 chr2L 11248524 11248576 chr2L 11248653 11248653 15 125 16.5 19.0 17.8 0.8 129 chr2L 11248524 intron ab + chr2L 11248588 intron ab + chr2L 11248653 intron ab + chr2L_15_11245001 chr2L_11245001 RAL-301_125b 681 chr2L 11253292 11253355 chr2L 11253423 11253486 13 128 11.5 20.0 15.8 0.8 194 chr2L 11253292 intron ab + chr2L 11253389 intron ab + chr2L 11253486 intron ab + chr2L_13_11250001 chr2L_11250001 RAL-301_125b 682 chr2L 11292331 11292405 chr2L 11292462 11292537 18 131 26.5 31.5 29.0 0.6 206 chr2L 11292331 intergenic not near genes chr2L 11292434 intergenic not near genes chr2L 11292537 intergenic not near genes chr2L_18_11290001 chr2L_11290001 RAL-301_125b 683 chr2L 11308958 11308967 chr2L 11309116 11309125 5 158 26.5 2.5 14.5 0.3 167 chr2L 11308958 intergenic not near genes chr2L 11309042 intergenic not near genes chr2L 11309125 intergenic not near genes chr2L_5_11305001 chr2L_11305001 RAL-301_125b 684 chr2L 11308987 11309007 chr2L 11309115 11309165 4 150 13.5 2.5 8.0 0.4 178 chr2L 11308987 intergenic not near genes chr2L 11309076 intergenic not near genes chr2L 11309165 intergenic not near genes chr2L_4_11305001 chr2L_11305001 RAL-301_125b 685 chr2L 11315222 11315272 chr2L 11317676 11317726 G2 26 2450 5.0 7.5 6.2 3.6 2504 chr2L 11315222 intergenic not near genes chr2L 11316474 intergenic not near genes chr2L 11317726 intergenic not near genes chr2L_26_11315001 chr2L_11315001 RAL-301_125b 686 chr2L 11357936 11358004 chr2L 11358064 11358132 13 128 29.5 32.5 31.0 0.4 196 chr2L 11357936 intergenic not near genes chr2L 11358034 intergenic not near genes chr2L 11358132 intergenic not near genes chr2L_13_11355001 chr2L_11355001 RAL-301_125b 687 chr2L 11380585 11380632 chr2L 11380712 11380759 10 127 16.5 23.5 20.0 0.5 174 chr2L 11380585 intergenic not near genes chr2L 11380672 intergenic not near genes chr2L 11380759 intergenic not near genes chr2L_10_11380001 chr2L_11380001 RAL-301_125b 688 chr2L 11397553 11397561 chr2L 11397713 11397721 4 160 26.5 30.0 28.2 0.1 168 chr2L 11397553 intergenic not near genes chr2L 11397637 intergenic not near genes chr2L 11397721 intergenic not near genes chr2L_4_11395001 chr2L_11395001 RAL-301_125b 689 chr2L 11403644 11403683 chr2L 11403816 11403840 8 170 15.0 9.0 12.0 0.6 196 chr2L 11403644 intergenic not near genes chr2L 11403742 intergenic not near genes chr2L 11403840 intergenic not near genes chr2L_8_11400001 chr2L_11400001 RAL-301_125b 690 chr2L 11404732 11404805 chr2L 11404858 11404931 10 126 16.0 15.0 15.5 0.6 199 chr2L 11404732 intergenic not near genes chr2L 11404832 intergenic not near genes chr2L 11404931 intergenic not near genes chr2L_10_11400001 chr2L_11400001 RAL-301_125b 691 chr2L 11413255 11413322 chr2L 11413429 11413496 19 174 15.5 20.0 17.8 1.0 241 chr2L 11413255 intergenic not near genes chr2L 11413376 intergenic not near genes chr2L 11413496 intergenic not near genes chr2L_19_11410001 chr2L_11410001 RAL-301_125b 692 chr2L 11414916 11414980 chr2L 11415049 11415113 19 132 20.0 14.5 17.2 1.0 197 chr2L 11414916 intergenic not near genes chr2L 11415014 intergenic not near genes chr2L 11415113 intergenic not near genes chr2L_19_11415001 chr2L_11415001 RAL-301_125b 693 chr2L 11418609 11418688 chr2L 11418738 11418754 20 126 9.0 6.0 7.5 2.4 145 chr2L 11418609 intergenic not near genes chr2L 11418682 intergenic not near genes chr2L 11418754 intergenic not near genes chr2L_20_11415001 chr2L_11415001 RAL-301_125b 694 chr2L 11427826 11427863 chr2L 11427948 11427995 10 131 8.5 9.5 9.0 1.0 169 chr2L 11427826 intergenic not near genes chr2L 11427910 intergenic not near genes chr2L 11427995 intergenic not near genes chr2L_10_11425001 chr2L_11425001 RAL-301_125b 695 chr2L 11449309 11449321 chr2L 11449451 11449463 6 142 24.5 8.5 16.5 0.3 154 chr2L 11449309 intergenic not near genes chr2L 11449386 intergenic not near genes chr2L 11449463 intergenic not near genes chr2L_6_11445001 chr2L_11445001 RAL-301_125b 696 chr2L 11485636 11485671 chr2L 11485761 11485797 10 126 21.0 15.5 18.2 0.5 161 chr2L 11485636 exon,5` UTR CG43355 +,sala + chr2L 11485716 exon,5` UTR CG43355 +,sala + chr2L 11485797 intron,intron CG43355 +,sala + chr2L_10_11485001 chr2L_11485001 RAL-301_125b 697 chr2L 11491081 11491151 chr2L 11491212 11491271 9 126 21.0 16.0 18.5 0.5 190 chr2L 11491081 intergenic not near genes chr2L 11491176 intergenic not near genes chr2L 11491271 intergenic not near genes chr2L_9_11490001 chr2L_11490001 RAL-301_125b 698 chr2L 11501292 11501296 chr2L 11501507 11501511 4 215 15.0 18.5 16.8 0.2 219 chr2L 11501292 intergenic spz4 + chr2L 11501402 intergenic spz4 + chr2L 11501511 intergenic spz4 + chr2L_4_11500001 chr2L_11500001 RAL-301_125b 699 chr2L 11520112 11520188 chr2L 11520301 11520377 20 189 19.0 20.0 19.5 1.0 265 chr2L 11520112 exon CG14929 + chr2L 11520244 exon CG14929 + chr2L 11520377 intron,3` UTR CG14929 +,CG14930 - chr2L_20_11520001 chr2L_11520001 RAL-301_125b 700 chr2L 11536673 11536803 chr2L 11536804 11536935 10 131 0.0 0.0 0.0 10.0 262 chr2L 11536673 exon CG43438 + chr2L 11536804 3` UTR CG43438 + chr2L 11536935 intergenic CG43438 + chr2L_10_11535001 chr2L_11535001 RAL-301_125b 701 chr2L 11537141 11537188 chr2L 11537273 11537320 13 128 18.0 18.5 18.2 0.7 179 chr2L 11537141 intergenic CG43438 + chr2L 11537230 intergenic CG43438 + chr2L 11537320 intergenic CG43438 + chr2L_13_11535001 chr2L_11535001 RAL-301_125b 702 chr2L 11537709 11537773 chr2L 11537876 11537940 11 167 27.5 29.0 28.2 0.4 231 chr2L 11537709 intergenic not near genes chr2L 11537824 intergenic not near genes chr2L 11537940 intergenic not near genes chr2L_11_11535001 chr2L_11535001 RAL-301_125b 703 chr2L 11540537 11540605 chr2L 11547988 11548057 Tabor 24 7452 10.0 5.0 7.5 2.8 7520 chr2L 11540537 intergenic not near genes chr2L 11544297 intergenic not near genes chr2L 11548057 intergenic not near genes chr2L_24_11540001 chr2L_11540001 RAL-301_125b 704 chr2L 11555391 11555423 chr2L 11555560 11555592 7 169 16.0 10.5 13.2 0.5 201 chr2L 11555391 intergenic not near genes chr2L 11555492 intergenic not near genes chr2L 11555592 intergenic not near genes chr2L_7_11555001 chr2L_11555001 RAL-301_125b 705 chr2L 11563588 11563663 chr2L 11568842 11568917 copia 29 5251 10.5 12.5 11.5 2.3 5329 chr2L 11563588 intergenic not near genes chr2L 11566252 intergenic not near genes chr2L 11568917 intergenic not near genes chr2L_29_11565001 chr2L_11565001 RAL-301_125b 706 chr2L 11614017 11614086 chr2L 11615552 11615555 hopper2 25 1531 8.0 10.0 9.0 2.5 1538 chr2L 11614017 intron kek2 + chr2L 11614786 intron kek2 + chr2L 11615555 intron kek2 + chr2L_25_11610001 chr2L_11610001 RAL-301_125b 707 chr2L 11631767 11631829 chr2L 11631905 11631967 4 138 11.5 17.5 14.5 0.3 200 chr2L 11631767 intergenic not near genes chr2L 11631867 intergenic not near genes chr2L 11631967 intergenic not near genes chr2L_4_11630001 chr2L_11630001 RAL-301_125b 708 chr2L 11633119 11633195 chr2L 11633271 11633347 27 149 13.5 16.5 15.0 1.7 228 chr2L 11633119 intergenic not near genes chr2L 11633233 intergenic not near genes chr2L 11633347 intergenic not near genes chr2L_27_11630001 chr2L_11630001 RAL-301_125b 709 chr2L 11676276 11676319 chr2L 11676416 11676457 7 139 6.0 0.0 3.0 1.8 181 chr2L 11676276 intergenic not near genes chr2L 11676366 intergenic not near genes chr2L 11676457 intergenic not near genes chr2L_7_11675001 chr2L_11675001 RAL-301_125b 710 chr2L 11681736 11681746 chr2L 11681873 11681883 5 137 23.5 0.0 11.8 0.4 147 chr2L 11681736 intergenic not near genes chr2L 11681810 intergenic not near genes chr2L 11681883 intergenic not near genes chr2L_5_11680001 chr2L_11680001 RAL-301_125b 711 chr2L 11698520 11698585 chr2L 11698663 11698728 14 142 13.5 10.5 12.0 1.1 208 chr2L 11698520 intergenic not near genes chr2L 11698624 intergenic not near genes chr2L 11698728 intergenic not near genes chr2L_14_11695001 chr2L_11695001 RAL-301_125b 712 chr2L 11710465 11710535 chr2L 11710590 11710658 19 121 9.0 12.5 10.8 1.6 193 chr2L 11710465 intergenic not near genes chr2L 11710562 intergenic not near genes chr2L 11710658 intergenic not near genes chr2L_19_11710001 chr2L_11710001 RAL-301_125b 713 chr2L 11713471 11713473 chr2L 11720989 11720991 blood 4 7518 24.0 13.0 18.5 0.2 7520 chr2L 11713471 intergenic not near genes chr2L 11717231 intergenic not near genes chr2L 11720991 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-301_125b 714 chr2L 11713479 11713538 chr2L 11720985 11721056 blood 31 7516 10.0 11.5 10.8 2.6 7577 chr2L 11713479 intergenic not near genes chr2L 11717268 intergenic not near genes chr2L 11721056 intergenic CR44143 + chr2L_31_11715001 chr2L_11715001 RAL-301_125b 715 chr2L 11750302 11750314 chr2L 11750638 11750650 6 336 24.0 22.5 23.2 0.2 348 chr2L 11750302 intergenic not near genes chr2L 11750476 intergenic not near genes chr2L 11750650 intergenic not near genes chr2L_6_11750001 chr2L_11750001 RAL-301_125b 716 chr2L 11752816 11752889 chr2L 11753156 11753229 22 339 21.0 17.0 19.0 1.1 413 chr2L 11752816 intergenic CG42470 - chr2L 11753022 3` UTR CG42470 - chr2L 11753229 exon CG42470 - chr2L_22_11750001 chr2L_11750001 RAL-301_125b 717 chr2L 11769897 11769922 chr2L 11770023 11770048 9 126 33.0 24.5 28.8 0.3 151 chr2L 11769897 intergenic not near genes chr2L 11769972 intergenic not near genes chr2L 11770048 intergenic not near genes chr2L_9_11765001 chr2L_11765001 RAL-301_125b 718 chr2L 11781028 11781245 chr2L 11781162 11781373 29 128 9.0 0.0 4.5 5.3 345 chr2L 11781028 intergenic not near genes chr2L 11781200 intergenic not near genes chr2L 11781373 intergenic not near genes chr2L_29_11780001 chr2L_11780001 RAL-301_125b 719 chr2L 11784483 11784508 chr2L 11784610 11784635 9 127 14.5 17.0 15.8 0.5 152 chr2L 11784483 intergenic not near genes chr2L 11784559 intergenic not near genes chr2L 11784635 intergenic not near genes chr2L_9_11780001 chr2L_11780001 RAL-301_125b 720 chr2L 11824891 11824955 chr2L 11825029 11825093 21 138 21.0 17.5 19.2 1.0 202 chr2L 11824891 intron Pde1c - chr2L 11824992 intron Pde1c - chr2L 11825093 intron Pde1c - chr2L_21_11820001 chr2L_11820001 RAL-301_125b 721 chr2L 11825649 11825668 chr2L 11825778 11825797 15 129 25.0 0.0 12.5 1.1 148 chr2L 11825649 intron Pde1c - chr2L 11825723 intron Pde1c - chr2L 11825797 intron Pde1c - chr2L_15_11825001 chr2L_11825001 RAL-301_125b 722 chr2L 11833917 11833940 chr2L 11834043 11834066 11 126 15.5 19.5 17.5 0.6 149 chr2L 11833917 intron Pde1c - chr2L 11833992 intron Pde1c - chr2L 11834066 intron Pde1c - chr2L_11_11830001 chr2L_11830001 RAL-301_125b 723 chr2L 11841304 11841395 chr2L 11841451 11841523 16 140 3.5 0.5 2.0 5.3 219 chr2L 11841304 intron Pde1c - chr2L 11841414 intron Pde1c - chr2L 11841523 intron Pde1c - chr2L_16_11840001 chr2L_11840001 RAL-301_125b 724 chr2L 11853993 11854038 chr2L 11854120 11854165 15 127 19.5 15.5 17.5 0.8 172 chr2L 11853993 intron Pde1c - chr2L 11854079 intron Pde1c - chr2L 11854165 intron Pde1c - chr2L_15_11850001 chr2L_11850001 RAL-301_125b 725 chr2L 11866963 11867007 chr2L 11867125 11867169 4 162 21.0 33.0 27.0 0.1 206 chr2L 11866963 intron Pde1c - chr2L 11867066 intron Pde1c - chr2L 11867169 intron Pde1c - chr2L_4_11865001 chr2L_11865001 RAL-301_125b 726 chr2L 11870944 11870974 chr2L 11871072 11871102 10 128 4.0 16.5 10.2 0.9 158 chr2L 11870944 intron Pde1c - chr2L 11871023 intron Pde1c - chr2L 11871102 intron Pde1c - chr2L_10_11870001 chr2L_11870001 RAL-301_125b 727 chr2L 11875203 11875232 chr2L 11875343 11875396 6 160 24.0 25.0 24.5 0.2 193 chr2L 11875203 intron Pde1c - chr2L 11875300 intron Pde1c - chr2L 11875396 intron Pde1c - chr2L_6_11875001 chr2L_11875001 RAL-301_125b 728 chr2L 11892495 11892546 chr2L 11892634 11892685 24 138 16.5 21.5 19.0 1.2 190 chr2L 11892495 intron Pde1c - chr2L 11892590 intron Pde1c - chr2L 11892685 intron Pde1c - chr2L_24_11890001 chr2L_11890001 RAL-301_125b 729 chr2L 11912593 11912624 chr2L 11912719 11912751 5 127 16.0 8.5 12.2 0.4 158 chr2L 11912593 intron Pde1c - chr2L 11912672 intron Pde1c - chr2L 11912751 intron Pde1c - chr2L_5_11910001 chr2L_11910001 RAL-301_125b 730 chr2L 12031213 12031410 chr2L 12031339 12031541 19 129 28.0 15.5 21.8 0.8 328 chr2L 12031213 intron dmGlut + chr2L 12031377 intron dmGlut + chr2L 12031541 intron dmGlut + chr2L_19_12030001 chr2L_12030001 RAL-301_125b 731 chr2L 12046465 12046521 chr2L 12046639 12046695 15 174 18.0 14.5 16.2 0.9 230 chr2L 12046465 5` UTR CR44589 + chr2L 12046580 5` UTR CR44589 + chr2L 12046695 intergenic Plzf -,CR44589 + chr2L_15_12045001 chr2L_12045001 RAL-301_125b 732 chr2L 12067285 12067348 chr2L 12074387 12074450 297 23 7102 12.5 9.5 11.0 1.9 7165 chr2L 12067285 intergenic not near genes chr2L 12070868 intergenic not near genes chr2L 12074450 intergenic not near genes chr2L_23_12070001 chr2L_12070001 RAL-301_125b 733 chr2L 12080623 12080704 chr2L 12080783 12080865 20 160 15.0 14.0 14.5 1.3 242 chr2L 12080623 intergenic CR44591 +,CR44590 - chr2L 12080744 intergenic CR44590 -,CR44591 + chr2L 12080865 3` UTR CR44590 - chr2L_20_12080001 chr2L_12080001 RAL-301_125b 734 chr2L 12088294 12088336 chr2L 12088439 12088481 12 144 21.5 11.0 16.2 0.7 187 chr2L 12088294 intergenic CR44593 + chr2L 12088388 intergenic CR44593 + chr2L 12088481 intergenic CR44593 + chr2L_12_12085001 chr2L_12085001 RAL-301_125b 735 chr2L 12111972 12112045 chr2L 12112132 12112206 10 161 16.0 22.0 19.0 0.5 234 chr2L 12111972 3` UTR Phae2 + chr2L 12112089 3` UTR Phae2 + chr2L 12112206 3` UTR Phae2 + chr2L_10_12110001 chr2L_12110001 RAL-301_125b 736 chr2L 12131424 12131490 chr2L 12131570 12131636 20 146 12.0 11.5 11.8 1.6 212 chr2L 12131424 exon rho-6 - chr2L 12131530 intron rho-6 - chr2L 12131636 intron rho-6 - chr2L_20_12130001 chr2L_12130001 RAL-301_125b 737 chr2L 12132690 12132737 chr2L 12132826 12132873 19 135 4.5 12.0 8.2 2.1 183 chr2L 12132690 intron rho-6 - chr2L 12132782 intron rho-6 - chr2L 12132873 intron rho-6 - chr2L_19_12130001 chr2L_12130001 RAL-301_125b 738 chr2L 12141127 12141202 chr2L 12141272 12141348 14 145 15.5 16.0 15.8 0.8 221 chr2L 12141127 intergenic not near genes chr2L 12141238 intergenic not near genes chr2L 12141348 intergenic not near genes chr2L_14_12140001 chr2L_12140001 RAL-301_125b 739 chr2L 12151856 12151921 chr2L 12152001 12152066 14 143 14.0 16.5 15.2 0.9 210 chr2L 12151856 intron CG31760 + chr2L 12151961 intron CG31760 + chr2L 12152066 intron CG31760 + chr2L_14_12150001 chr2L_12150001 RAL-301_125b 740 chr2L 12153899 12153962 chr2L 12154014 12154089 22 126 16.0 19.5 17.8 1.2 190 chr2L 12153899 exon CG31760 + chr2L 12153994 intron CG31760 + chr2L 12154089 intron CG31760 + chr2L_22_12150001 chr2L_12150001 RAL-301_125b 741 chr2L 12179743 12179789 chr2L 12179857 12179925 14 131 12.0 7.5 9.8 1.3 182 chr2L 12179743 intron aret + chr2L 12179834 intron aret + chr2L 12179925 intron aret + chr2L_14_12175001 chr2L_12175001 RAL-301_125b 742 chr2L 12203261 12203318 chr2L 12203392 12203449 14 131 15.5 16.5 16.0 0.8 188 chr2L 12203261 intron aret + chr2L 12203355 intron aret + chr2L 12203449 intron aret + chr2L_14_12200001 chr2L_12200001 RAL-301_125b 743 chr2L 12210004 12210047 chr2L 12210143 12210186 6 139 16.0 10.5 13.2 0.4 182 chr2L 12210004 intron,3` UTR aret +,CG31759 + chr2L 12210095 intron aret + chr2L 12210186 intron aret + chr2L_6_12210001 chr2L_12210001 RAL-301_125b 744 chr2L 12229548 12229564 chr2L 12229675 12229689 7 127 4.5 0.0 2.2 2.2 141 chr2L 12229548 intron aret + chr2L 12229618 intron aret + chr2L 12229689 intron aret + chr2L_7_12225001 chr2L_12225001 RAL-301_125b 745 chr2L 12229566 12229587 chr2L 12229661 12229714 17 123 3.5 0.0 1.8 6.1 148 chr2L 12229566 intron aret + chr2L 12229640 intron aret + chr2L 12229714 intron aret + chr2L_17_12225001 chr2L_12225001 RAL-301_125b 746 chr2L 12236961 12237033 chr2L 12237095 12237168 22 129 14.0 15.0 14.5 1.4 207 chr2L 12236961 intron aret + chr2L 12237064 intron aret + chr2L 12237168 intron aret + chr2L_22_12235001 chr2L_12235001 RAL-301_125b 747 chr2L 12239958 12240020 chr2L 12240089 12240151 14 130 24.5 22.5 23.5 0.6 193 chr2L 12239958 intron aret + chr2L 12240054 intron aret + chr2L 12240151 intron aret + chr2L_14_12240001 chr2L_12240001 RAL-301_125b 748 chr2L 12243945 12243982 chr2L 12244072 12244109 7 127 23.5 26.0 24.8 0.3 164 chr2L 12243945 intron aret + chr2L 12244027 intron aret + chr2L 12244109 intron aret + chr2L_7_12240001 chr2L_12240001 RAL-301_125b 749 chr2L 12255816 12255882 chr2L 12255962 12256028 15 144 34.0 21.0 27.5 0.5 212 chr2L 12255816 intron aret + chr2L 12255922 intron aret + chr2L 12256028 intron aret + chr2L_15_12255001 chr2L_12255001 RAL-301_125b 750 chr2L 12266494 12266553 chr2L 12266613 12266686 10 128 14.0 11.0 12.5 0.7 192 chr2L 12266494 intron aret + chr2L 12266590 intron aret + chr2L 12266686 intron aret + chr2L_10_12265001 chr2L_12265001 RAL-301_125b 751 chr2L 12268063 12268102 chr2L 12268195 12268231 4 131 14.5 6.0 10.2 0.4 168 chr2L 12268063 intron aret + chr2L 12268147 intron aret + chr2L 12268231 intron aret + chr2L_4_12265001 chr2L_12265001 RAL-301_125b 752 chr2L 12275148 12275165 chr2L 12275285 12275302 6 137 33.0 30.0 31.5 0.2 154 chr2L 12275148 intron aret + chr2L 12275225 intron aret + chr2L 12275302 intron aret + chr2L_6_12275001 chr2L_12275001 RAL-301_125b 753 chr2L 12293520 12293571 chr2L 12293667 12293718 9 147 22.0 15.5 18.8 0.5 198 chr2L 12293520 intron aret + chr2L 12293619 intron aret + chr2L 12293718 intron aret + chr2L_9_12290001 chr2L_12290001 RAL-301_125b 754 chr2L 12294205 12294272 chr2L 12294337 12294415 5 136 25.5 26.0 25.8 0.2 210 chr2L 12294205 intron aret + chr2L 12294310 intron aret + chr2L 12294415 intron aret + chr2L_5_12290001 chr2L_12290001 RAL-301_125b 755 chr2L 12296181 12296250 chr2L 12296325 12296400 15 144 16.5 18.0 17.2 0.8 219 chr2L 12296181 intron aret + chr2L 12296290 intron aret + chr2L 12296400 intron aret + chr2L_15_12295001 chr2L_12295001 RAL-301_125b 756 chr2L 12299493 12299522 chr2L 12299604 12299654 8 126 22.0 14.0 18.0 0.4 161 chr2L 12299493 intron aret + chr2L 12299574 intron aret + chr2L 12299654 intron aret + chr2L_8_12295001 chr2L_12295001 RAL-301_125b 757 chr2L 12305367 12305432 chr2L 12305505 12305570 14 138 22.5 26.5 24.5 0.5 203 chr2L 12305367 intron aret + chr2L 12305468 intron aret + chr2L 12305570 intron aret + chr2L_14_12305001 chr2L_12305001 RAL-301_125b 758 chr2L 12327763 12327836 chr2L 12327954 12328028 17 190 15.0 19.5 17.2 0.9 265 chr2L 12327763 intergenic not near genes chr2L 12327896 intergenic not near genes chr2L 12328028 intergenic not near genes chr2L_17_12325001 chr2L_12325001 RAL-301_125b 759 chr2L 12337257 12337278 chr2L 12337395 12337416 7 138 13.5 11.0 12.2 0.5 159 chr2L 12337257 intergenic not near genes chr2L 12337336 intergenic not near genes chr2L 12337416 intergenic not near genes chr2L_7_12335001 chr2L_12335001 RAL-301_125b 760 chr2L 12349590 12349655 chr2L 12349734 12349799 13 144 24.5 17.0 20.8 0.6 209 chr2L 12349590 intron bru-2 + chr2L 12349694 intron bru-2 + chr2L 12349799 intron bru-2 + chr2L_13_12345001 chr2L_12345001 RAL-301_125b 761 chr2L 12357776 12357859 chr2L 12357942 12358016 15 159 10.0 13.5 11.8 1.2 240 chr2L 12357776 intron,exon bru-2 +,CG17010 + chr2L 12357896 intron,3` UTR bru-2 +,CG17010 + chr2L 12358016 intron bru-2 + chr2L_15_12355001 chr2L_12355001 RAL-301_125b 762 chr2L 12366818 12366887 chr2L 12366954 12367023 11 136 27.0 24.5 25.8 0.4 205 chr2L 12366818 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12367023 intron bru-2 + chr2L_11_12365001 chr2L_12365001 RAL-301_125b 763 chr2L 12384889 12384957 chr2L 12385024 12385092 22 135 19.0 21.0 20.0 1.0 203 chr2L 12384889 intron bru-2 + chr2L 12384990 intron bru-2 + chr2L 12385092 intron bru-2 + chr2L_22_12380001 chr2L_12380001 RAL-301_125b 764 chr2L 12396002 12396023 chr2L 12396146 12396167 11 144 16.0 12.0 14.0 0.7 165 chr2L 12396002 exon bru-2 + chr2L 12396084 intron bru-2 + chr2L 12396167 intron bru-2 + chr2L_11_12395001 chr2L_12395001 RAL-301_125b 765 chr2L 12408899 12408905 chr2L 12409040 12409046 6 141 40.5 34.5 37.5 0.2 147 chr2L 12408899 intron vir-1 - chr2L 12408972 intron vir-1 - chr2L 12409046 intron vir-1 - chr2L_6_12405001 chr2L_12405001 RAL-301_125b 766 chr2L 12408909 12408962 chr2L 12409036 12409103 27 140 30.5 33.5 32.0 0.8 194 chr2L 12408909 intron vir-1 - chr2L 12409006 intron vir-1 - chr2L 12409103 intron vir-1 - chr2L_27_12405001 chr2L_12405001 RAL-301_125b 767 chr2L 12410962 12411006 chr2L 12411091 12411135 9 129 13.5 0.0 6.8 1.2 173 chr2L 12410962 intron vir-1 - chr2L 12411048 intron vir-1 - chr2L 12411135 intron vir-1 - chr2L_9_12410001 chr2L_12410001 RAL-301_125b 768 chr2L 12418827 12418904 chr2L 12418972 12419049 21 143 13.5 12.0 12.8 1.5 222 chr2L 12418827 intron vir-1 - chr2L 12418938 intron vir-1 - chr2L 12419049 intron vir-1 - chr2L_21_12415001 chr2L_12415001 RAL-301_125b 769 chr2L 12466202 12466240 chr2L 12466332 12466370 13 130 1.0 0.0 0.5 8.7 168 chr2L 12466202 intron bun - chr2L 12466286 intron bun - chr2L 12466370 intron bun - chr2L_13_12465001 chr2L_12465001 RAL-301_125b 770 chr2L 12470704 12470777 chr2L 12470831 12470903 12 127 15.5 12.5 14.0 0.8 199 chr2L 12470704 intron bun - chr2L 12470804 intron bun - chr2L 12470903 intron bun - chr2L_12_12470001 chr2L_12470001 RAL-301_125b 771 chr2L 12487844 12487913 chr2L 12487975 12488033 33 133 9.5 9.5 9.5 3.1 189 chr2L 12487844 intron bun - chr2L 12487938 intron bun - chr2L 12488033 intron bun - chr2L_33_12485001 chr2L_12485001 RAL-301_125b 772 chr2L 12490258 12490296 chr2L 12490384 12490415 9 123 12.0 18.0 15.0 0.6 157 chr2L 12490258 intron bun - chr2L 12490336 intron bun - chr2L 12490415 intron bun - chr2L_9_12490001 chr2L_12490001 RAL-301_125b 773 chr2L 12494697 12494721 chr2L 12494838 12494862 4 141 17.5 27.0 22.2 0.2 165 chr2L 12494697 intron bun - chr2L 12494780 intron bun - chr2L 12494862 intron bun - chr2L_4_12490001 chr2L_12490001 RAL-301_125b 774 chr2L 12500574 12500617 chr2L 12500700 12500743 8 126 24.0 31.5 27.8 0.3 169 chr2L 12500574 intron bun - chr2L 12500658 intron bun - chr2L 12500743 intron bun - chr2L_8_12500001 chr2L_12500001 RAL-301_125b 775 chr2L 12510088 12510126 chr2L 12510215 12510233 12 124 20.5 21.5 21.0 0.5 145 chr2L 12510088 intron bun - chr2L 12510160 intron bun - chr2L 12510233 intron bun - chr2L_12_12510001 chr2L_12510001 RAL-301_125b 776 chr2L 12515805 12515880 chr2L 12515932 12516007 15 127 17.0 21.5 19.2 0.7 202 chr2L 12515805 intron bun - chr2L 12515906 intron bun - chr2L 12516007 intron bun - chr2L_15_12515001 chr2L_12515001 RAL-301_125b 777 chr2L 12529186 12529253 chr2L 12529388 12529455 6 202 25.5 19.5 22.5 0.3 269 chr2L 12529186 intron bun - chr2L 12529320 intron bun - chr2L 12529455 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-301_125b 778 chr2L 12558272 12558349 chr2L 12565451 12565528 HMS-Beagle 30 7178 5.5 5.0 5.2 4.8 7256 chr2L 12558272 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565528 intergenic not near genes chr2L_30_12560001 chr2L_12560001 RAL-301_125b 779 chr2L 12570303 12570596 chr2L 12570434 12570731 13 136 8.5 0.0 4.2 2.5 428 chr2L 12570303 intergenic CR44598 - chr2L 12570517 intergenic CR44598 - chr2L 12570731 3` UTR CR44598 - chr2L_13_12570001 chr2L_12570001 RAL-301_125b 780 chr2L 12583455 12583513 chr2L 12583597 12583654 7 140 14.5 9.0 11.8 0.5 199 chr2L 12583455 5` UTR CR44595 + chr2L 12583554 intergenic CR44595 + chr2L 12583654 intergenic CR44595 + chr2L_7_12580001 chr2L_12580001 RAL-301_125b 781 chr2L 12609458 12609480 chr2L 12609624 12609646 12 166 11.5 8.5 10.0 1.1 188 chr2L 12609458 intron nub + chr2L 12609552 intron nub + chr2L 12609646 intron nub + chr2L_12_12605001 chr2L_12605001 RAL-301_125b 782 chr2L 12619859 12619905 chr2L 12619982 12620031 21 120 7.5 5.5 6.5 2.8 172 chr2L 12619859 intron,intron nub +,Ref2 - chr2L 12619945 intron,intron nub +,Ref2 - chr2L 12620031 intron,intron nub +,Ref2 - chr2L_21_12615001 chr2L_12615001 RAL-301_125b 783 chr2L 12656156 12656222 chr2L 12656282 12656348 26 126 53.5 54.5 54.0 0.5 192 chr2L 12656156 intergenic not near genes chr2L 12656252 intergenic not near genes chr2L 12656348 intergenic not near genes chr2L_26_12655001 chr2L_12655001 RAL-301_125b 784 chr2L 12693799 12693810 chr2L 12693926 12693937 4 127 39.0 23.5 31.2 0.1 138 chr2L 12693799 exon CG6153 + chr2L 12693868 3` UTR CG6153 + chr2L 12693937 3` UTR,3` UTR CG6153 +,CG5780 - chr2L_4_12690001 chr2L_12690001 RAL-301_125b 785 chr2L 12693814 12693873 chr2L 12693922 12694000 5 123 26.5 24.0 25.2 0.2 186 chr2L 12693814 exon CG6153 + chr2L 12693907 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12694000 exon CG5780 - chr2L_5_12690001 chr2L_12690001 RAL-301_125b 786 chr2L 12717346 12717362 chr2L 12717485 12717501 6 139 25.5 24.5 25.0 0.2 155 chr2L 12717346 intron Pih1D1 - chr2L 12717424 intron Pih1D1 - chr2L 12717501 intron Pih1D1 - chr2L_6_12715001 chr2L_12715001 RAL-301_125b 787 chr2L 12728882 12728940 chr2L 12729173 12729231 pogo 16 291 15.0 13.0 14.0 1.1 349 chr2L 12728882 intron MRP + chr2L 12729056 intron MRP + chr2L 12729231 exon MRP + chr2L_16_12725001 chr2L_12725001 RAL-301_125b 788 chr2L 12731030 12731033 chr2L 12735847 12735850 F-element 4 4817 17.0 15.0 16.0 0.2 4820 chr2L 12731030 intron MRP + chr2L 12733440 intron MRP + chr2L 12735850 intron MRP + chr2L_4_12730001 chr2L_12730001 RAL-301_125b 789 chr2L 12731036 12731085 chr2L 12735843 12735902 F-element 24 4815 7.5 14.5 11.0 2.0 4866 chr2L 12731036 intron MRP + chr2L 12733469 intron MRP + chr2L 12735902 intron MRP + chr2L_24_12730001 chr2L_12730001 RAL-301_125b 790 chr2L 12739132 12739151 chr2L 12743963 12743972 Doc 12 4829 16.0 11.0 13.5 0.8 4840 chr2L 12739132 exon MRP + chr2L 12741552 intron MRP + chr2L 12743972 intron MRP + chr2L_12_12740001 chr2L_12740001 RAL-301_125b 791 chr2L 12739159 12739196 chr2L 12743960 12744027 Doc 16 4829 7.0 9.5 8.2 1.7 4868 chr2L 12739159 exon MRP + chr2L 12741593 intron MRP + chr2L 12744027 exon MRP + chr2L_16_12740001 chr2L_12740001 RAL-301_125b 792 chr2L 12751288 12751337 chr2L 12751421 12751470 6 133 25.0 25.5 25.2 0.2 182 chr2L 12751288 intergenic not near genes chr2L 12751379 intergenic not near genes chr2L 12751470 intergenic not near genes chr2L_6_12750001 chr2L_12750001 RAL-301_125b 793 chr2L 12763779 12763867 chr2L 12764041 12764129 BS 27 262 0.0 0.0 0.0 27.0 350 chr2L 12763779 intergenic not near genes chr2L 12763954 intergenic not near genes chr2L 12764129 intergenic not near genes chr2L_27_12760001 chr2L_12760001 RAL-301_125b 794 chr2L 12766723 12766756 chr2L 12766851 12766884 5 128 14.5 10.0 12.2 0.4 161 chr2L 12766723 intergenic not near genes chr2L 12766804 intergenic not near genes chr2L 12766884 intergenic not near genes chr2L_5_12765001 chr2L_12765001 RAL-301_125b 795 chr2L 12781757 12781808 chr2L 12789250 12789301 Quasimodo 25 7494 15.0 7.0 11.0 2.1 7544 chr2L 12781757 intergenic not near genes chr2L 12785529 intergenic not near genes chr2L 12789301 intergenic not near genes chr2L_25_12785001 chr2L_12785001 RAL-301_125b 796 chr2L 12791565 12791625 chr2L 12795289 12795350 F-element 22 3724 7.0 14.5 10.8 1.9 3785 chr2L 12791565 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795350 intergenic not near genes chr2L_22_12790001 chr2L_12790001 RAL-301_125b 797 chr2L 12796839 12796896 chr2L 12796969 12797026 16 126 19.0 15.5 17.2 0.9 187 chr2L 12796839 intergenic not near genes chr2L 12796932 intergenic not near genes chr2L 12797026 intergenic not near genes chr2L_16_12795001 chr2L_12795001 RAL-301_125b 798 chr2L 12811460 12811472 chr2L 12811609 12811621 5 149 4.5 26.0 15.2 0.3 161 chr2L 12811460 intergenic not near genes chr2L 12811540 intergenic not near genes chr2L 12811621 intergenic not near genes chr2L_5_12810001 chr2L_12810001 RAL-301_125b 799 chr2L 12812480 12812541 chr2L 12813154 12813215 7 674 18.0 19.0 18.5 0.4 735 chr2L 12812480 intergenic not near genes chr2L 12812848 intergenic not near genes chr2L 12813215 intergenic not near genes chr2L_7_12810001 chr2L_12810001 RAL-301_125b 800 chr2L 12837879 12837956 chr2L 12838010 12838088 29 131 16.0 18.0 17.0 1.6 209 chr2L 12837879 intergenic not near genes chr2L 12837984 intergenic not near genes chr2L 12838088 intergenic not near genes chr2L_29_12835001 chr2L_12835001 RAL-301_125b 801 chr2L 12854799 12854840 chr2L 12854926 12854967 14 126 27.0 30.0 28.5 0.5 168 chr2L 12854799 intergenic not near genes chr2L 12854883 intergenic not near genes chr2L 12854967 intergenic not near genes chr2L_14_12850001 chr2L_12850001 RAL-301_125b 802 chr2L 12861660 12861664 chr2L 12863176 12863181 hobo 5 1517 22.5 15.5 19.0 0.2 1521 chr2L 12861660 intergenic not near genes chr2L 12862420 intergenic not near genes chr2L 12863181 intergenic not near genes chr2L_5_12860001 chr2L_12860001 RAL-301_125b 803 chr2L 12861681 12861725 chr2L 12863170 12863206 hobo 15 1509 7.0 13.5 10.2 1.3 1525 chr2L 12861681 intergenic not near genes chr2L 12862444 intergenic not near genes chr2L 12863206 intergenic not near genes chr2L_15_12860001 chr2L_12860001 RAL-301_125b 804 chr2L 12885085 12885143 chr2L 12885228 12885293 10 149 27.5 28.5 28.0 0.3 208 chr2L 12885085 intergenic not near genes chr2L 12885189 intergenic not near genes chr2L 12885293 intergenic not near genes chr2L_10_12885001 chr2L_12885001 RAL-301_125b 805 chr2L 12891464 12891538 chr2L 12891615 12891689 17 147 11.0 12.0 11.5 1.4 225 chr2L 12891464 intergenic not near genes chr2L 12891576 intergenic not near genes chr2L 12891689 intergenic not near genes chr2L_17_12890001 chr2L_12890001 RAL-301_125b 806 chr2L 12893983 12894049 chr2L 12895500 12895521 hobo 29 1509 9.5 12.5 11.0 2.4 1538 chr2L 12893983 intergenic not near genes chr2L 12894752 intergenic not near genes chr2L 12895521 intergenic not near genes chr2L_29_12890001 chr2L_12890001 RAL-301_125b 807 chr2L 12930466 12930495 chr2L 12930592 12930621 16 126 18.0 20.0 19.0 0.8 155 chr2L 12930466 intergenic not near genes chr2L 12930544 intergenic not near genes chr2L 12930621 intergenic not near genes chr2L_16_12930001 chr2L_12930001 RAL-301_125b 808 chr2L 12933817 12933877 chr2L 12941326 12941394 blood 32 7515 11.5 9.0 10.2 2.9 7577 chr2L 12933817 intergenic not near genes chr2L 12937606 intergenic not near genes chr2L 12941394 intergenic not near genes chr2L_32_12935001 chr2L_12935001 RAL-301_125b 809 chr2L 12944887 12944943 chr2L 12945087 12945141 8 198 15.0 10.0 12.5 0.6 254 chr2L 12944887 intergenic not near genes chr2L 12945014 intergenic not near genes chr2L 12945141 intergenic not near genes chr2L_8_12945001 chr2L_12945001 RAL-301_125b 810 chr2L 12945276 12945285 chr2L 12945406 12945413 4 129 26.0 21.5 23.8 0.2 137 chr2L 12945276 intergenic not near genes chr2L 12945344 intergenic not near genes chr2L 12945413 intergenic not near genes chr2L_4_12945001 chr2L_12945001 RAL-301_125b 811 chr2L 12945286 12945306 chr2L 12945401 12945436 8 125 22.0 21.0 21.5 0.4 150 chr2L 12945286 intergenic not near genes chr2L 12945361 intergenic not near genes chr2L 12945436 intergenic not near genes chr2L_8_12945001 chr2L_12945001 RAL-301_125b 812 chr2L 12945932 12945986 chr2L 12946062 12946116 7 127 27.0 32.0 29.5 0.2 184 chr2L 12945932 intergenic not near genes chr2L 12946024 intergenic not near genes chr2L 12946116 intergenic not near genes chr2L_7_12945001 chr2L_12945001 RAL-301_125b 813 chr2L 13036202 13036268 chr2L 13036494 13036560 X-element 34 292 11.5 16.5 14.0 2.3 358 chr2L 13036202 intron CG9932 - chr2L 13036381 intron CG9932 - chr2L 13036560 intron CG9932 - chr2L_34_13035001 chr2L_13035001 RAL-301_125b 814 chr2L 13063341 13063407 chr2L 13063467 13063535 19 126 28.0 15.0 21.5 0.8 194 chr2L 13063341 intergenic not near genes chr2L 13063438 intergenic not near genes chr2L 13063535 intergenic not near genes chr2L_19_13060001 chr2L_13060001 RAL-301_125b 815 chr2L 13093804 13093855 chr2L 13093932 13093983 10 128 26.0 28.0 27.0 0.4 179 chr2L 13093804 intergenic not near genes chr2L 13093894 intergenic not near genes chr2L 13093983 intergenic not near genes chr2L_10_13090001 chr2L_13090001 RAL-301_125b 816 chr2L 13138422 13138486 chr2L 13138556 13138621 24 133 17.0 13.0 15.0 1.5 199 chr2L 13138422 intergenic not near genes chr2L 13138522 intergenic not near genes chr2L 13138621 intergenic not near genes chr2L_24_13135001 chr2L_13135001 RAL-301_125b 817 chr2L 13147701 13147765 chr2L 13147827 13147891 19 126 17.0 14.5 15.8 1.1 190 chr2L 13147701 intergenic not near genes chr2L 13147796 intergenic not near genes chr2L 13147891 intergenic not near genes chr2L_19_13145001 chr2L_13145001 RAL-301_125b 818 chr2L 13151497 13151529 chr2L 13151603 13151665 12 136 14.5 13.5 14.0 0.8 168 chr2L 13151497 intergenic not near genes chr2L 13151581 intergenic not near genes chr2L 13151665 intergenic not near genes chr2L_12_13150001 chr2L_13150001 RAL-301_125b 819 chr2L 13153953 13154077 chr2L 13154091 13154204 5 131 4.0 4.0 4.0 1.0 251 chr2L 13153953 intergenic not near genes chr2L 13154078 intergenic not near genes chr2L 13154204 intergenic not near genes chr2L_5_13150001 chr2L_13150001 RAL-301_125b 820 chr2L 13193313 13193353 chr2L 13193445 13193485 13 131 24.0 19.0 21.5 0.6 172 chr2L 13193313 intron Edem2 + chr2L 13193399 intron Edem2 + chr2L 13193485 exon Edem2 + chr2L_13_13190001 chr2L_13190001 RAL-301_125b 821 chr2L 13241901 13241921 chr2L 13244342 13244355 BS 4 2438 13.0 4.0 8.5 0.4 2454 chr2L 13241901 5` UTR CR45330 + chr2L 13243128 intron CR45330 + chr2L 13244355 5` UTR CR45330 + chr2L_4_13240001 chr2L_13240001 RAL-301_125b 822 chr2L 13255262 13255298 chr2L 13255455 13255491 6 193 7.0 12.0 9.5 0.6 229 chr2L 13255262 intron CG31728 + chr2L 13255376 intron CG31728 + chr2L 13255491 exon CG31728 + chr2L_6_13255001 chr2L_13255001 RAL-301_125b 823 chr2L 13266341 13266402 chr2L 13266479 13266540 9 138 24.5 33.0 28.8 0.3 199 chr2L 13266341 intron CG44085 + chr2L 13266440 intron CG44085 + chr2L 13266540 intron CG44085 + chr2L_9_13265001 chr2L_13265001 RAL-301_125b 824 chr2L 13311925 13311999 chr2L 13312064 13312138 10 139 11.5 18.0 14.8 0.6 213 chr2L 13311925 intron CG43778 - chr2L 13312032 intron CG43778 - chr2L 13312138 intron CG43778 - chr2L_10_13310001 chr2L_13310001 RAL-301_125b 825 chr2L 13316883 13316909 chr2L 13317016 13317038 6 131 15.5 19.5 17.5 0.3 155 chr2L 13316883 intron CG43778 - chr2L 13316960 intron CG43778 - chr2L 13317038 intron CG43778 - chr2L_6_13315001 chr2L_13315001 RAL-301_125b 826 chr2L 13323785 13323859 chr2L 13324360 13324434 15 573 18.0 34.0 26.0 0.6 649 chr2L 13323785 intron CG43778 - chr2L 13324110 intron CG43778 - chr2L 13324434 intron CG43778 - chr2L_15_13320001 chr2L_13320001 RAL-301_125b 827 chr2L 13332491 13332558 chr2L 13332620 13332700 15 136 13.5 12.0 12.8 1.1 209 chr2L 13332491 intergenic not near genes chr2L 13332596 intergenic not near genes chr2L 13332700 intergenic not near genes chr2L_15_13330001 chr2L_13330001 RAL-301_125b 828 chr2L 13342003 13342050 chr2L 13342134 13342182 7 131 17.5 9.0 13.2 0.5 179 chr2L 13342003 intergenic not near genes chr2L 13342092 intergenic not near genes chr2L 13342182 intergenic not near genes chr2L_7_13340001 chr2L_13340001 RAL-301_125b 829 chr2L 13398670 13398747 chr2L 13398800 13398877 33 130 29.0 26.5 27.8 1.1 207 chr2L 13398670 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398877 3` UTR CR44600 - chr2L_33_13395001 chr2L_13395001 RAL-301_125b 830 chr2L 13405601 13405664 chr2L 13410448 13410511 Doc 29 4843 7.5 14.5 11.0 2.4 4910 chr2L 13405601 exon CG7110 + chr2L 13408056 intron CG7110 + chr2L 13410511 exon CG7110 + chr2L_29_13405001 chr2L_13405001 RAL-301_125b 831 chr2L 13412285 13412351 chr2L 13412462 13412528 19 177 16.5 16.5 16.5 1.1 243 chr2L 13412285 intergenic CG16848 + chr2L 13412406 intergenic CG16848 + chr2L 13412528 5` UTR CG16848 + chr2L_19_13410001 chr2L_13410001 RAL-301_125b 832 chr2L 13422406 13422500 chr2L 13422551 13422593 8 129 3.5 9.0 6.2 1.1 187 chr2L 13422406 intron CG42784 + chr2L 13422500 intron CG42784 + chr2L 13422593 intron CG42784 + chr2L_8_13420001 chr2L_13420001 RAL-301_125b 833 chr2L 13430454 13430470 chr2L 13431934 13431950 8 1480 33.0 23.5 28.2 0.3 1496 chr2L 13430454 intron CG42784 + chr2L 13431202 intron CG42784 + chr2L 13431950 intron CG42784 + chr2L_8_13430001 chr2L_13430001 RAL-301_125b 834 chr2L 13430471 13430530 chr2L 13431931 13432008 13 1474 23.5 22.5 23.0 0.5 1537 chr2L 13430471 intron CG42784 + chr2L 13431240 intron CG42784 + chr2L 13432008 intron CG42784 + chr2L_13_13430001 chr2L_13430001 RAL-301_125b 835 chr2L 13432943 13433014 chr2L 13433094 13433165 16 151 19.5 15.0 17.2 0.9 222 chr2L 13432943 intron CG42784 + chr2L 13433054 intron CG42784 + chr2L 13433165 intron CG42784 + chr2L_16_13430001 chr2L_13430001 RAL-301_125b 836 chr2L 13437304 13437375 chr2L 13437435 13437509 13 133 15.0 11.0 13.0 0.9 205 chr2L 13437304 intron,intron CG42784 +,Tehao + chr2L 13437406 intron,intron CG42784 +,Tehao + chr2L 13437509 intron,intron CG42784 +,Tehao + chr2L_13_13435001 chr2L_13435001 RAL-301_125b 837 chr2L 13437617 13437633 chr2L 13437777 13437793 5 160 22.5 34.0 28.2 0.2 176 chr2L 13437617 intron,intron CG42784 +,Tehao + chr2L 13437705 intron,intron CG42784 +,Tehao + chr2L 13437793 intron,intron CG42784 +,Tehao + chr2L_5_13435001 chr2L_13435001 RAL-301_125b 838 chr2L 13449418 13449494 chr2L 13456904 13456980 Quasimodo 29 7486 6.5 12.0 9.2 2.8 7562 chr2L 13449418 intron,intron CG42784 +,Hsp60D - chr2L 13453199 intron CG42784 + chr2L 13456980 intron CG42784 + chr2L_29_13450001 chr2L_13450001 RAL-301_125b 839 chr2L 13460117 13460196 chr2L 13460260 13460338 25 143 26.0 25.5 25.8 0.9 221 chr2L 13460117 intron,exon CG42784 +,CG42810 + chr2L 13460228 intron CG42784 + chr2L 13460338 intron CG42784 + chr2L_25_13460001 chr2L_13460001 RAL-301_125b 840 chr2L 13481414 13481464 chr2L 13482071 13482121 jockey 14 656 18.5 14.0 16.2 0.8 707 chr2L 13481414 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482121 intron CG42784 + chr2L_14_13480001 chr2L_13480001 RAL-301_125b 841 chr2L 13556580 13556605 chr2L 13556710 13556734 7 131 11.0 11.0 11.0 0.6 154 chr2L 13556580 intron kuz + chr2L 13556657 intron kuz + chr2L 13556734 intron kuz + chr2L_7_13555001 chr2L_13555001 RAL-301_125b 842 chr2L 13560362 13560410 chr2L 13565233 13565281 F-element 24 4871 15.5 11.5 13.5 1.7 4919 chr2L 13560362 intron kuz + chr2L 13562822 intron kuz + chr2L 13565281 intron kuz + chr2L_24_13560001 chr2L_13560001 RAL-301_125b 843 chr2L 13574124 13574179 chr2L 13574253 13574308 23 129 22.0 14.5 18.2 1.2 184 chr2L 13574124 intron kuz + chr2L 13574216 intron kuz + chr2L 13574308 intron kuz + chr2L_23_13570001 chr2L_13570001 RAL-301_125b 844 chr2L 13591722 13591724 chr2L 13591888 13591890 4 166 23.5 13.0 18.2 0.2 168 chr2L 13591722 intron kuz + chr2L 13591806 intron kuz + chr2L 13591890 intron kuz + chr2L_4_13590001 chr2L_13590001 RAL-301_125b 845 chr2L 13622102 13622168 chr2L 13622251 13622317 4 147 3.0 7.5 5.2 0.6 215 chr2L 13622102 intron kuz + chr2L 13622210 intron kuz + chr2L 13622317 intron kuz + chr2L_4_13620001 chr2L_13620001 RAL-301_125b 846 chr2L 13629529 13629538 chr2L 13629655 13629664 4 126 18.5 21.5 20.0 0.2 135 chr2L 13629529 intron kuz + chr2L 13629596 intron kuz + chr2L 13629664 intron kuz + chr2L_4_13625001 chr2L_13625001 RAL-301_125b 847 chr2L 13629540 13629590 chr2L 13629651 13629717 10 124 18.5 21.0 19.8 0.5 177 chr2L 13629540 intron kuz + chr2L 13629628 intron kuz + chr2L 13629717 intron kuz + chr2L_10_13625001 chr2L_13625001 RAL-301_125b 848 chr2L 13666472 13666476 chr2L 13666606 13666610 7 134 29.5 10.5 20.0 0.3 138 chr2L 13666472 intron CG18507 + chr2L 13666541 intron CG18507 + chr2L 13666610 intron CG18507 + chr2L_7_13665001 chr2L_13665001 RAL-301_125b 849 chr2L 13677892 13677961 chr2L 13678022 13678091 15 130 14.0 15.5 14.8 0.9 199 chr2L 13677892 3` UTR CG31814 - chr2L 13677992 3` UTR CG31814 - chr2L 13678091 3` UTR CG31814 - chr2L_15_13675001 chr2L_13675001 RAL-301_125b 850 chr2L 13684229 13684288 chr2L 13684355 13684414 7 126 8.0 9.5 8.8 0.7 185 chr2L 13684229 exon CG31814 - chr2L 13684322 intron CG31814 - chr2L 13684414 exon CG31814 - chr2L_7_13680001 chr2L_13680001 RAL-301_125b 851 chr2L 13693354 13693421 chr2L 13693676 13693743 24 317 22.0 22.5 22.2 1.0 389 chr2L 13693354 intron CG31814 - chr2L 13693548 intron CG31814 - chr2L 13693743 intron CG31814 - chr2L_24_13690001 chr2L_13690001 RAL-301_125b 852 chr2L 13712330 13712409 chr2L 13712472 13712518 10 139 15.0 16.5 15.8 0.6 188 chr2L 13712330 intron CG31814 - chr2L 13712424 intron CG31814 - chr2L 13712518 intron CG31814 - chr2L_10_13710001 chr2L_13710001 RAL-301_125b 853 chr2L 13713517 13713574 chr2L 13713643 13713700 23 126 7.0 12.0 9.5 2.2 183 chr2L 13713517 intron CG31814 - chr2L 13713608 intron CG31814 - chr2L 13713700 intron CG31814 - chr2L_23_13710001 chr2L_13710001 RAL-301_125b 854 chr2L 13733723 13733787 chr2L 13733891 13733956 37 169 6.0 9.5 7.8 4.2 233 chr2L 13733723 intergenic not near genes chr2L 13733840 intergenic not near genes chr2L 13733956 intergenic not near genes chr2L_37_13730001 chr2L_13730001 RAL-301_125b 855 chr2L 13761237 13761304 chr2L 13761370 13761437 12 133 27.0 24.5 25.8 0.4 200 chr2L 13761237 intron TM9SF4 + chr2L 13761337 intron TM9SF4 + chr2L 13761437 intron TM9SF4 + chr2L_12_13760001 chr2L_13760001 RAL-301_125b 856 chr2L 13761779 13761832 chr2L 13762923 13762936 Doc 18 1157 7.5 11.0 9.2 1.8 1157 chr2L 13761779 intron TM9SF4 + chr2L 13762358 intron TM9SF4 + chr2L 13762936 intron TM9SF4 + chr2L_18_13760001 chr2L_13760001 RAL-301_125b 857 chr2L 13842087 13842164 chr2L 13842221 13842298 34 134 7.0 0.0 3.5 7.6 211 chr2L 13842087 intron CenG1A + chr2L 13842192 intron CenG1A + chr2L 13842298 intron CenG1A + chr2L_34_13840001 chr2L_13840001 RAL-301_125b 858 chr2L 13853046 13853114 chr2L 13862246 13862314 roo 24 9200 11.0 9.0 10.0 2.2 9268 chr2L 13853046 intron CenG1A + chr2L 13857680 intron CenG1A + chr2L 13862314 intron CenG1A + chr2L_24_13855001 chr2L_13855001 RAL-301_125b 859 chr2L 13914763 13914837 chr2L 13914893 13914967 21 130 23.0 25.5 24.2 0.8 204 chr2L 13914763 5` UTR Ance-3 + chr2L 13914865 5` UTR Ance-3 + chr2L 13914967 5` UTR Ance-3 + chr2L_21_13910001 chr2L_13910001 RAL-301_125b 860 chr2L 13933836 13933899 chr2L 13934006 13934074 12 172 25.5 28.0 26.8 0.4 238 chr2L 13933836 intron,intron Ance-3 +,CG16885 - chr2L 13933955 intron,intron Ance-3 +,CG16885 - chr2L 13934074 intron,intron Ance-3 +,CG16885 - chr2L_12_13930001 chr2L_13930001 RAL-301_125b 861 chr2L 13952119 13952141 chr2L 13952251 13952273 5 132 27.0 24.5 25.8 0.2 154 chr2L 13952119 intron Ance-3 + chr2L 13952196 intron Ance-3 + chr2L 13952273 intron Ance-3 + chr2L_5_13950001 chr2L_13950001 RAL-301_125b 862 chr2L 13972615 13972678 chr2L 13972752 13972815 16 136 15.0 18.5 16.8 0.9 200 chr2L 13972615 intron He - chr2L 13972715 intron He - chr2L 13972815 exon He - chr2L_16_13970001 chr2L_13970001 RAL-301_125b 863 chr2L 13973938 13973944 chr2L 13974085 13974091 5 147 26.0 12.5 19.2 0.2 153 chr2L 13973938 3` UTR NimC1 - chr2L 13974014 3` UTR NimC1 - chr2L 13974091 3` UTR NimC1 - chr2L_5_13970001 chr2L_13970001 RAL-301_125b 864 chr2L 13988234 13988304 chr2L 13988371 13988441 25 137 18.0 21.0 19.5 1.2 207 chr2L 13988234 intron rk - chr2L 13988338 intron rk - chr2L 13988441 intron rk - chr2L_25_13985001 chr2L_13985001 RAL-301_125b 865 chr2L 13998892 13998940 chr2L 13999029 13999077 13 137 30.0 15.5 22.8 0.5 185 chr2L 13998892 intron rk - chr2L 13998984 intron rk - chr2L 13999077 intron rk - chr2L_13_13995001 chr2L_13995001 RAL-301_125b 866 chr2L 14017730 14017790 chr2L 14017872 14017932 5 141 30.5 27.5 29.0 0.2 202 chr2L 14017730 intron bgm + chr2L 14017831 intron bgm + chr2L 14017932 intron bgm + chr2L_5_14015001 chr2L_14015001 RAL-301_125b 867 chr2L 14048929 14048933 chr2L 14049058 14049062 5 129 8.5 5.5 7.0 0.6 133 chr2L 14048929 intron nAChRalpha5 + chr2L 14048996 intron nAChRalpha5 + chr2L 14049062 intron nAChRalpha5 + chr2L_5_14045001 chr2L_14045001 RAL-301_125b 868 chr2L 14073136 14073206 chr2L 14073442 14073512 13 304 16.0 11.5 13.8 0.9 376 chr2L 14073136 intron nAChRalpha5 + chr2L 14073324 intron nAChRalpha5 + chr2L 14073512 intron nAChRalpha5 + chr2L_13_14070001 chr2L_14070001 RAL-301_125b 869 chr2L 14080253 14080282 chr2L 14080392 14080421 4 138 20.5 22.5 21.5 0.2 168 chr2L 14080253 intron nAChRalpha5 + chr2L 14080337 intron nAChRalpha5 + chr2L 14080421 intron nAChRalpha5 + chr2L_4_14080001 chr2L_14080001 RAL-301_125b 870 chr2L 14086629 14086671 chr2L 14086763 14086824 4 142 9.0 21.0 15.0 0.2 195 chr2L 14086629 intron nAChRalpha5 + chr2L 14086726 intron nAChRalpha5 + chr2L 14086824 intron nAChRalpha5 + chr2L_4_14085001 chr2L_14085001 RAL-301_125b 871 chr2L 14096115 14096135 chr2L 14096257 14096257 4 136 11.5 0.0 5.8 0.6 142 chr2L 14096115 intergenic not near genes chr2L 14096186 intergenic not near genes chr2L 14096257 intergenic not near genes chr2L_4_14095001 chr2L_14095001 RAL-301_125b 872 chr2L 14118610 14118685 chr2L 14118759 14118834 19 148 19.5 19.0 19.2 0.9 224 chr2L 14118610 intergenic not near genes chr2L 14118722 intergenic not near genes chr2L 14118834 intergenic not near genes chr2L_19_14115001 chr2L_14115001 RAL-301_125b 873 chr2L 14135192 14135228 chr2L 14135323 14135359 14 131 22.0 13.0 17.5 0.8 167 chr2L 14135192 intron CG17341 + chr2L 14135276 intron CG17341 + chr2L 14135359 intron CG17341 + chr2L_14_14135001 chr2L_14135001 RAL-301_125b 874 chr2L 14149669 14149737 chr2L 14149796 14149864 15 127 19.5 20.0 19.8 0.7 195 chr2L 14149669 intron CG17341 + chr2L 14149766 intron CG17341 + chr2L 14149864 intron CG17341 + chr2L_15_14145001 chr2L_14145001 RAL-301_125b 875 chr2L 14160646 14160713 chr2L 14160782 14160849 25 136 16.0 17.0 16.5 1.4 203 chr2L 14160646 intergenic CG17341 +,CG43332 - chr2L 14160748 intergenic CG17341 +,CG43332 - chr2L 14160849 intergenic CG17341 +,CG43332 - chr2L_25_14160001 chr2L_14160001 RAL-301_125b 876 chr2L 14198164 14198211 chr2L 14198439 14198486 8 275 25.0 30.5 27.8 0.3 322 chr2L 14198164 intron Dyrk2 - chr2L 14198325 intron Dyrk2 - chr2L 14198486 intron Dyrk2 - chr2L_8_14195001 chr2L_14195001 RAL-301_125b 877 chr2L 14229592 14229644 chr2L 14229727 14229787 4 137 24.5 21.5 23.0 0.2 195 chr2L 14229592 intron Dyrk2 - chr2L 14229690 intron Dyrk2 - chr2L 14229787 intron Dyrk2 - chr2L_4_14225001 chr2L_14225001 RAL-301_125b 878 chr2L 14268538 14268611 chr2L 14268665 14268733 28 126 23.5 22.5 23.0 1.2 195 chr2L 14268538 intron wb + chr2L 14268636 intron wb + chr2L 14268733 intron wb + chr2L_28_14265001 chr2L_14265001 RAL-301_125b 879 chr2L 14290748 14290820 chr2L 14290878 14290950 17 129 18.0 25.0 21.5 0.8 202 chr2L 14290748 intron wb + chr2L 14290849 intron wb + chr2L 14290950 intron wb + chr2L_17_14290001 chr2L_14290001 RAL-301_125b 880 chr2L 14307847 14307908 chr2L 14307977 14308045 9 135 18.0 21.0 19.5 0.4 198 chr2L 14307847 intron wb + chr2L 14307946 intron wb + chr2L 14308045 intron wb + chr2L_9_14305001 chr2L_14305001 RAL-301_125b 881 chr2L 14308266 14308288 chr2L 14308378 14308390 4 117 23.5 29.0 26.2 0.1 124 chr2L 14308266 intron wb + chr2L 14308328 intron wb + chr2L 14308390 intron wb + chr2L_4_14305001 chr2L_14305001 RAL-301_125b 882 chr2L 14374731 14374801 chr2L 14374872 14374942 19 141 12.5 22.5 17.5 1.0 211 chr2L 14374731 intergenic not near genes chr2L 14374836 intergenic not near genes chr2L 14374942 intergenic not near genes chr2L_19_14370001 chr2L_14370001 RAL-301_125b 883 chr2L 14391887 14391946 chr2L 14392011 14392073 21 126 15.5 17.0 16.2 1.2 186 chr2L 14391887 exon elB - chr2L 14391980 intron elB - chr2L 14392073 intron elB - chr2L_21_14390001 chr2L_14390001 RAL-301_125b 884 chr2L 14396167 14396223 chr2L 14398972 14399013 4 2802 41.0 35.5 38.2 0.1 2846 chr2L 14396167 intron elB - chr2L 14397590 intron elB - chr2L 14399013 intron elB - chr2L_4_14395001 chr2L_14395001 RAL-301_125b 885 chr2L 14396032 14396084 chr2L 14399091 14399155 6 3061 43.5 53.0 48.2 0.1 3123 chr2L 14396032 intron elB - chr2L 14397594 intron elB - chr2L 14399155 intron elB - chr2L_6_14395001 chr2L_14395001 RAL-301_125b 886 chr2L 14427471 14427543 chr2L 14427612 14427684 26 140 17.5 18.0 17.8 1.4 213 chr2L 14427471 intergenic not near genes chr2L 14427578 intergenic not near genes chr2L 14427684 intergenic not near genes chr2L_26_14425001 chr2L_14425001 RAL-301_125b 887 chr2L 14458771 14458797 chr2L 14458898 14458924 11 127 14.5 5.0 9.8 1.0 153 chr2L 14458771 intergenic not near genes chr2L 14458848 intergenic not near genes chr2L 14458924 intergenic not near genes chr2L_11_14455001 chr2L_14455001 RAL-301_125b 888 chr2L 14465566 14465617 chr2L 14469093 14469144 hopper2 20 3527 6.5 21.0 13.8 1.4 3578 chr2L 14465566 intergenic not near genes chr2L 14467355 intergenic not near genes chr2L 14469144 intergenic not near genes chr2L_20_14465001 chr2L_14465001 RAL-301_125b 889 chr2L 14486846 14486885 chr2L 14486976 14487015 7 130 13.0 13.0 13.0 0.5 169 chr2L 14486846 intergenic CR44731 + chr2L 14486930 intergenic CR44731 + chr2L 14487015 intergenic CR44731 + chr2L_7_14485001 chr2L_14485001 RAL-301_125b 890 chr2L 14503386 14503433 chr2L 14503515 14503562 15 127 9.5 10.0 9.8 1.4 176 chr2L 14503386 intergenic not near genes chr2L 14503474 intergenic not near genes chr2L 14503562 intergenic not near genes chr2L_15_14500001 chr2L_14500001 RAL-301_125b 891 chr2L 14555101 14555159 chr2L 14555230 14555288 15 129 25.0 28.0 26.5 0.5 187 chr2L 14555101 intergenic not near genes chr2L 14555194 intergenic not near genes chr2L 14555288 intergenic not near genes chr2L_15_14555001 chr2L_14555001 RAL-301_125b 892 chr2L 14564190 14564228 chr2L 14564271 14564311 6 101 29.5 26.5 28.0 0.2 121 chr2L 14564190 intergenic CG3473 - chr2L 14564250 intergenic not near genes chr2L 14564311 intergenic not near genes chr2L_6_14560001 chr2L_14560001 RAL-301_125b 893 chr2L 14570684 14570721 chr2L 14570815 14570852 7 131 31.5 32.0 31.8 0.2 168 chr2L 14570684 intergenic not near genes chr2L 14570768 intergenic not near genes chr2L 14570852 intergenic not near genes chr2L_7_14570001 chr2L_14570001 RAL-301_125b 894 chr2L 14580610 14580630 chr2L 14580737 14580757 8 127 23.0 19.5 21.2 0.4 147 chr2L 14580610 intergenic not near genes chr2L 14580684 intergenic not near genes chr2L 14580757 intergenic not near genes chr2L_8_14580001 chr2L_14580001 RAL-301_125b 895 chr2L 14587880 14587904 chr2L 14588387 14588411 6 507 25.0 0.0 12.5 0.4 531 chr2L 14587880 intergenic CG42680 - chr2L 14588146 exon CG42680 - chr2L 14588411 intergenic CG42680 - chr2L_6_14585001 chr2L_14585001 RAL-301_125b 896 chr2L 14588340 14588416 chr2L 14588544 14588599 39 201 0.0 11.5 5.8 5.7 259 chr2L 14588340 intergenic CG42680 - chr2L 14588470 intergenic CG42680 - chr2L 14588599 intergenic CG42680 - chr2L_39_14585001 chr2L_14585001 RAL-301_125b 897 chr2L 14588638 14588671 chr2L 14588979 14589012 12 341 7.5 9.0 8.2 1.3 374 chr2L 14588638 intergenic CG42680 - chr2L 14588825 intergenic not near genes chr2L 14589012 intergenic not near genes chr2L_12_14585001 chr2L_14585001 RAL-301_125b 898 chr2L 14593043 14593087 chr2L 14593170 14593213 12 127 23.0 17.5 20.2 0.6 170 chr2L 14593043 intergenic not near genes chr2L 14593128 intergenic not near genes chr2L 14593213 intergenic not near genes chr2L_12_14590001 chr2L_14590001 RAL-301_125b 899 chr2L 14601933 14602003 chr2L 14602067 14602137 29 132 10.0 8.5 9.2 2.8 204 chr2L 14601933 exon osp - chr2L 14602035 intron osp - chr2L 14602137 exon osp - chr2L_29_14600001 chr2L_14600001 RAL-301_125b 900 chr2L 14617868 14617914 chr2L 14617998 14618044 23 130 12.5 23.5 18.0 1.2 176 chr2L 14617868 intron,intron,intron osp -,Adh +,Adhr + chr2L 14617956 intron,intron,intron osp -,Adh +,Adhr + chr2L 14618044 intron,intron,intron osp -,Adh +,Adhr + chr2L_23_14615001 chr2L_14615001 RAL-301_125b 901 chr2L 14618871 14618883 chr2L 14619301 14619314 jockey 6 430 10.5 7.5 9.0 0.6 443 chr2L 14618871 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619092 intron osp - chr2L 14619314 intron osp - chr2L_6_14615001 chr2L_14615001 RAL-301_125b 902 chr2L 14642535 14642574 chr2L 14651732 14651771 roo 6 9200 6.5 6.5 6.5 0.8 9236 chr2L 14642535 intron osp - chr2L 14647153 intron osp - chr2L 14651771 intron osp - chr2L_6_14645001 chr2L_14645001 RAL-301_125b 903 chr2L 14678699 14678764 chr2L 14678859 14678948 16 175 3.5 1.0 2.2 5.0 249 chr2L 14678699 intron osp - chr2L 14678824 intron osp - chr2L 14678948 intron osp - chr2L_16_14675001 chr2L_14675001 RAL-301_125b 904 chr2L 14706511 14706573 chr2L 14706639 14706654 8 119 16.5 11.0 13.8 0.5 143 chr2L 14706511 intergenic not near genes chr2L 14706582 intergenic not near genes chr2L 14706654 intergenic not near genes chr2L_8_14705001 chr2L_14705001 RAL-301_125b 905 chr2L 14707161 14707232 chr2L 14707330 14707401 23 169 6.0 2.0 4.0 4.6 240 chr2L 14707161 intergenic not near genes chr2L 14707281 intergenic not near genes chr2L 14707401 intergenic not near genes chr2L_23_14705001 chr2L_14705001 RAL-301_125b 906 chr2L 14715493 14715555 chr2L 14715634 14715670 17 139 9.5 8.5 9.0 1.7 177 chr2L 14715493 intergenic not near genes chr2L 14715582 intergenic not near genes chr2L 14715670 intergenic not near genes chr2L_17_14715001 chr2L_14715001 RAL-301_125b 907 chr2L 14726541 14726565 chr2L 14726673 14726697 5 132 25.0 28.0 26.5 0.2 156 chr2L 14726541 intron CG42685 - chr2L 14726619 intron CG42685 - chr2L 14726697 intron CG42685 - chr2L_5_14725001 chr2L_14725001 RAL-301_125b 908 chr2L 14747497 14747540 chr2L 14747628 14747677 4 134 19.0 28.5 23.8 0.2 180 chr2L 14747497 intergenic not near genes chr2L 14747587 intergenic not near genes chr2L 14747677 intergenic not near genes chr2L_4_14745001 chr2L_14745001 RAL-301_125b 909 chr2L 14769846 14769899 chr2L 14769978 14770031 10 132 13.5 13.5 13.5 0.7 185 chr2L 14769846 intergenic not near genes chr2L 14769938 intergenic not near genes chr2L 14770031 intergenic not near genes chr2L_10_14765001 chr2L_14765001 RAL-301_125b 910 chr2L 14774185 14774261 chr2L 14774452 14774528 19 265 11.5 11.0 11.2 1.6 343 chr2L 14774185 3` UTR CG4650 - chr2L 14774356 3` UTR CG4650 - chr2L 14774528 3` UTR CG4650 - chr2L_19_14770001 chr2L_14770001 RAL-301_125b 911 chr2L 14778777 14778824 chr2L 14779115 14779152 9 336 15.0 30.0 22.5 0.4 375 chr2L 14778777 intergenic not near genes chr2L 14778964 intergenic not near genes chr2L 14779152 intergenic not near genes chr2L_9_14775001 chr2L_14775001 RAL-301_125b 912 chr2L 14795854 14795915 chr2L 14795987 14796048 11 133 23.0 26.5 24.8 0.4 194 chr2L 14795854 intron CG18420 - chr2L 14795951 exon CG18420 - chr2L 14796048 exon CG18420 - chr2L_11_14795001 chr2L_14795001 RAL-301_125b 913 chr2L 14803836 14803883 chr2L 14809087 14809136 copia 24 5251 9.0 9.5 9.2 2.4 5300 chr2L 14803836 intergenic not near genes chr2L 14806486 intergenic not near genes chr2L 14809136 intergenic not near genes chr2L_24_14805001 chr2L_14805001 RAL-301_125b 914 chr2L 14803884 14803906 chr2L 14809085 14809159 copia 8 5246 6.0 9.5 7.8 0.9 5275 chr2L 14803884 intergenic not near genes chr2L 14806522 intergenic not near genes chr2L 14809159 intergenic not near genes chr2L_8_14805001 chr2L_14805001 RAL-301_125b 915 chr2L 14817834 14817880 chr2L 14817973 14818019 7 139 27.0 31.5 29.2 0.2 185 chr2L 14817834 intergenic not near genes chr2L 14817926 intergenic not near genes chr2L 14818019 intergenic not near genes chr2L_7_14815001 chr2L_14815001 RAL-301_125b 916 chr2L 14827473 14827534 chr2L 14827643 14827704 8 170 23.0 19.5 21.2 0.4 231 chr2L 14827473 intergenic not near genes chr2L 14827588 intergenic not near genes chr2L 14827704 intergenic not near genes chr2L_8_14825001 chr2L_14825001 RAL-301_125b 917 chr2L 14833752 14833822 chr2L 14833906 14833938 24 152 20.0 27.5 23.8 1.0 186 chr2L 14833752 intergenic not near genes chr2L 14833845 intergenic not near genes chr2L 14833938 intergenic not near genes chr2L_24_14830001 chr2L_14830001 RAL-301_125b 918 chr2L 14840924 14841006 chr2L 14841062 14841138 30 137 8.0 9.0 8.5 3.2 214 chr2L 14840924 3` UTR CR43805 - chr2L 14841031 3` UTR CR43805 - chr2L 14841138 3` UTR CR43805 - chr2L_30_14840001 chr2L_14840001 RAL-301_125b 919 chr2L 14851247 14851312 chr2L 14851612 14851679 11 366 30.0 22.0 26.0 0.4 432 chr2L 14851247 intron CG15279 - chr2L 14851463 5` UTR CG15279 - chr2L 14851679 5` UTR CG15279 - chr2L_11_14850001 chr2L_14850001 RAL-301_125b 920 chr2L 14854926 14854985 chr2L 14855054 14855113 16 123 18.0 18.0 18.0 0.8 187 chr2L 14854926 intergenic not near genes chr2L 14855020 intergenic not near genes chr2L 14855113 intergenic not near genes chr2L_16_14855001 chr2L_14855001 RAL-301_125b 921 chr2L 14889911 14889916 chr2L 14890386 14890391 jockey 4 475 22.5 10.0 16.2 0.2 480 chr2L 14889911 intergenic not near genes chr2L 14890151 intergenic not near genes chr2L 14890391 intergenic not near genes chr2L_4_14890001 chr2L_14890001 RAL-301_125b 922 chr2L 14889917 14889979 chr2L 14890382 14890446 jockey 28 473 8.0 9.5 8.8 2.9 529 chr2L 14889917 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890446 intergenic not near genes chr2L_28_14890001 chr2L_14890001 RAL-301_125b 923 chr2L 14900588 14900639 chr2L 14900949 14901000 8 360 19.0 17.5 18.2 0.4 412 chr2L 14900588 intergenic not near genes chr2L 14900794 intergenic not near genes chr2L 14901000 intergenic not near genes chr2L_8_14900001 chr2L_14900001 RAL-301_125b 924 chr2L 14975537 14975564 chr2L 14975675 14975702 9 138 18.5 18.0 18.2 0.5 165 chr2L 14975537 intergenic mol - chr2L 14975620 intergenic mol - chr2L 14975702 intergenic mol - chr2L_9_14975001 chr2L_14975001 RAL-301_125b 925 chr2L 14984336 14984388 chr2L 14991988 14992040 opus 21 7651 8.5 8.5 8.5 2.2 7704 chr2L 14984336 intron mol - chr2L 14988188 intron mol - chr2L 14992040 intron mol - chr2L_21_14985001 chr2L_14985001 RAL-301_125b 926 chr2L 15000169 15000209 chr2L 15000297 15000337 11 128 32.5 25.5 29.0 0.4 168 chr2L 15000169 intergenic not near genes chr2L 15000253 intergenic not near genes chr2L 15000337 intergenic not near genes chr2L_11_15000001 chr2L_15000001 RAL-301_125b 927 chr2L 15013108 15013147 chr2L 15013262 15013301 10 154 23.0 22.5 22.8 0.4 193 chr2L 15013108 intergenic CR43856 - chr2L 15013204 intergenic not near genes chr2L 15013301 intergenic not near genes chr2L_10_15010001 chr2L_15010001 RAL-301_125b 928 chr2L 15014573 15014652 chr2L 15014702 15014781 26 128 3.0 5.5 4.2 5.0 208 chr2L 15014573 intergenic not near genes chr2L 15014677 intergenic not near genes chr2L 15014781 intergenic not near genes chr2L_26_15010001 chr2L_15010001 RAL-301_125b 929 chr2L 15044662 15044734 chr2L 15044788 15044866 9 127 37.0 33.5 35.2 0.2 204 chr2L 15044662 intergenic ck - chr2L 15044764 intergenic ck - chr2L 15044866 intergenic ck - chr2L_9_15040001 chr2L_15040001 RAL-301_125b 930 chr2L 15078032 15078095 chr2L 15078156 15078233 32 138 9.0 5.0 7.0 4.0 201 chr2L 15078032 intron CG15270 + chr2L 15078132 intron CG15270 + chr2L 15078233 intron CG15270 + chr2L_32_15075001 chr2L_15075001 RAL-301_125b 931 chr2L 15079875 15079926 chr2L 15080001 15080068 8 136 18.0 21.5 19.8 0.4 193 chr2L 15079875 intron CG15270 + chr2L 15079972 intron CG15270 + chr2L 15080068 intron CG15270 + chr2L_8_15075001 chr2L_15075001 RAL-301_125b 932 chr2L 15082621 15082689 chr2L 15082760 15082833 12 144 28.5 26.0 27.2 0.4 212 chr2L 15082621 intron CG15270 + chr2L 15082727 intron CG15270 + chr2L 15082833 intron CG15270 + chr2L_12_15080001 chr2L_15080001 RAL-301_125b 933 chr2L 15087715 15087770 chr2L 15087875 15087930 7 160 8.5 13.0 10.8 0.6 215 chr2L 15087715 exon CG15270 + chr2L 15087822 intron CG15270 + chr2L 15087930 exon CG15270 + chr2L_7_15085001 chr2L_15085001 RAL-301_125b 934 chr2L 15098494 15098542 chr2L 15098624 15098672 12 129 18.0 15.0 16.5 0.7 178 chr2L 15098494 intergenic not near genes chr2L 15098583 intergenic not near genes chr2L 15098672 intergenic not near genes chr2L_12_15095001 chr2L_15095001 RAL-301_125b 935 chr2L 15099903 15099944 chr2L 15100040 15100092 11 146 6.0 0.0 3.0 2.8 189 chr2L 15099903 intergenic not near genes chr2L 15099998 intergenic not near genes chr2L 15100092 intergenic not near genes chr2L_11_15095001 chr2L_15095001 RAL-301_125b 936 chr2L 15103824 15103861 chr2L 15103971 15104007 7 147 18.0 23.0 20.5 0.3 183 chr2L 15103824 intergenic not near genes chr2L 15103916 intergenic not near genes chr2L 15104007 intergenic not near genes chr2L_7_15100001 chr2L_15100001 RAL-301_125b 937 chr2L 15122726 15122804 chr2L 15122856 15122935 7 130 29.0 31.0 30.0 0.2 209 chr2L 15122726 intergenic not near genes chr2L 15122830 intergenic not near genes chr2L 15122935 intergenic not near genes chr2L_7_15120001 chr2L_15120001 RAL-301_125b 938 chr2L 15137734 15137743 chr2L 15137868 15137877 5 134 25.0 14.0 19.5 0.2 143 chr2L 15137734 intergenic not near genes chr2L 15137806 intergenic not near genes chr2L 15137877 intergenic not near genes chr2L_5_15135001 chr2L_15135001 RAL-301_125b 939 chr2L 15138724 15138770 chr2L 15138857 15138903 17 133 4.5 8.0 6.2 2.4 179 chr2L 15138724 intergenic not near genes chr2L 15138814 intergenic not near genes chr2L 15138903 intergenic not near genes chr2L_17_15135001 chr2L_15135001 RAL-301_125b 940 chr2L 15156306 15156334 chr2L 15156434 15156461 5 127 20.5 21.5 21.0 0.2 155 chr2L 15156306 intergenic not near genes chr2L 15156384 intergenic not near genes chr2L 15156461 intergenic not near genes chr2L_5_15155001 chr2L_15155001 RAL-301_125b 941 chr2L 15159542 15159602 chr2L 15159719 15159779 9 177 29.0 23.5 26.2 0.3 237 chr2L 15159542 3` UTR CR44771 - chr2L 15159660 3` UTR CR44771 - chr2L 15159779 3` UTR CR44771 - chr2L_9_15155001 chr2L_15155001 RAL-301_125b 942 chr2L 15163907 15163929 chr2L 15164034 15164056 11 127 18.5 18.0 18.2 0.6 149 chr2L 15163907 intron CG4168 - chr2L 15163982 intron CG4168 - chr2L 15164056 intron CG4168 - chr2L_11_15160001 chr2L_15160001 RAL-301_125b 943 chr2L 15170584 15170653 chr2L 15170722 15170796 10 142 13.5 10.5 12.0 0.8 212 chr2L 15170584 intron CG4168 - chr2L 15170690 intron CG4168 - chr2L 15170796 intron CG4168 - chr2L_10_15170001 chr2L_15170001 RAL-301_125b 944 chr2L 15174373 15174441 chr2L 15174894 15174962 22 519 19.0 15.0 17.0 1.2 589 chr2L 15174373 intron CG4168 - chr2L 15174668 intron CG4168 - chr2L 15174962 intron CG4168 - chr2L_22_15170001 chr2L_15170001 RAL-301_125b 945 chr2L 15181741 15181805 chr2L 15181914 15181971 26 172 11.0 11.5 11.2 2.1 230 chr2L 15181741 intron CG4168 - chr2L 15181856 intron CG4168 - chr2L 15181971 intron CG4168 - chr2L_26_15180001 chr2L_15180001 RAL-301_125b 946 chr2L 15204157 15204168 chr2L 15204289 15204300 5 132 5.5 21.0 13.2 0.4 143 chr2L 15204157 intergenic CR43357 + chr2L 15204228 intergenic CR43357 + chr2L 15204300 intergenic CR43357 + chr2L_5_15200001 chr2L_15200001 RAL-301_125b 947 chr2L 15216074 15216132 chr2L 15216238 15216296 9 164 17.5 16.5 17.0 0.5 222 chr2L 15216074 3` UTR CG43230 + chr2L 15216185 intergenic CG43230 + chr2L 15216296 intergenic CG43230 + chr2L_9_15215001 chr2L_15215001 RAL-301_125b 948 chr2L 15226320 15226393 chr2L 15226447 15226516 26 123 11.0 6.0 8.5 2.7 196 chr2L 15226320 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226516 intergenic not near genes chr2L_26_15225001 chr2L_15225001 RAL-301_125b 949 chr2L 15244013 15244070 chr2L 15244176 15244233 12 163 8.5 18.5 13.5 0.8 220 chr2L 15244013 intron ZnT35C - chr2L 15244123 intron ZnT35C - chr2L 15244233 intron ZnT35C - chr2L_12_15240001 chr2L_15240001 RAL-301_125b 950 chr2L 15309310 15309372 chr2L 15309463 15309525 17 153 31.5 27.0 29.2 0.6 215 chr2L 15309310 intergenic not near genes chr2L 15309418 intergenic not near genes chr2L 15309525 intergenic not near genes chr2L_17_15305001 chr2L_15305001 RAL-301_125b 951 chr2L 15315038 15315072 chr2L 15315188 15315222 14 150 20.0 24.0 22.0 0.6 184 chr2L 15315038 intergenic not near genes chr2L 15315130 intergenic not near genes chr2L 15315222 intergenic not near genes chr2L_14_15315001 chr2L_15315001 RAL-301_125b 952 chr2L 15318910 15318979 chr2L 15319036 15319106 14 126 5.5 6.5 6.0 2.0 196 chr2L 15318910 intergenic nht - chr2L 15319008 intergenic nht - chr2L 15319106 intergenic nht - chr2L_14_15315001 chr2L_15315001 RAL-301_125b 953 chr2L 15343496 15343567 chr2L 15343630 15343709 9 139 18.5 13.0 15.8 0.5 213 chr2L 15343496 intergenic not near genes chr2L 15343602 intergenic not near genes chr2L 15343709 intergenic not near genes chr2L_9_15340001 chr2L_15340001 RAL-301_125b 954 chr2L 15350854 15350926 chr2L 15350987 15351060 18 134 4.5 9.0 6.8 2.3 206 chr2L 15350854 intergenic not near genes chr2L 15350957 intergenic not near genes chr2L 15351060 intergenic not near genes chr2L_18_15350001 chr2L_15350001 RAL-301_125b 955 chr2L 15354714 15354954 chr2L 15354851 15355093 23 138 13.5 10.0 11.8 1.8 379 chr2L 15354714 intergenic not near genes chr2L 15354904 intergenic not near genes chr2L 15355093 intergenic not near genes chr2L_23_15350001 chr2L_15350001 RAL-301_125b 956 chr2L 15355667 15355726 chr2L 15355795 15355854 9 128 23.0 20.0 21.5 0.4 187 chr2L 15355667 intergenic not near genes chr2L 15355760 intergenic not near genes chr2L 15355854 intergenic not near genes chr2L_9_15355001 chr2L_15355001 RAL-301_125b 957 chr2L 15375766 15375844 chr2L 15375928 15376006 12 162 29.0 27.5 28.2 0.4 240 chr2L 15375766 intergenic not near genes chr2L 15375886 intergenic not near genes chr2L 15376006 intergenic not near genes chr2L_12_15375001 chr2L_15375001 RAL-301_125b 958 chr2L 15387381 15387403 chr2L 15387495 15387532 7 126 17.5 21.5 19.5 0.3 151 chr2L 15387381 intergenic not near genes chr2L 15387456 intergenic not near genes chr2L 15387532 intergenic not near genes chr2L_7_15385001 chr2L_15385001 RAL-301_125b 959 chr2L 15439233 15439298 chr2L 15439371 15439436 15 138 18.0 21.0 19.5 0.7 203 chr2L 15439233 intergenic not near genes chr2L 15439334 intergenic not near genes chr2L 15439436 intergenic not near genes chr2L_15_15435001 chr2L_15435001 RAL-301_125b 960 chr2L 15446006 15446074 chr2L 15453525 15453593 blood 32 7519 7.0 5.5 6.2 4.4 7587 chr2L 15446006 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453593 intergenic not near genes chr2L_32_15445001 chr2L_15445001 RAL-301_125b 961 chr2L 15458216 15458277 chr2L 15458365 15458406 15 144 1.0 10.5 5.8 2.2 190 chr2L 15458216 intergenic not near genes chr2L 15458311 intergenic not near genes chr2L 15458406 intergenic not near genes chr2L_15_15455001 chr2L_15455001 RAL-301_125b 962 chr2L 15483236 15483314 chr2L 15483372 15483450 39 136 25.5 22.0 23.8 1.6 214 chr2L 15483236 intergenic not near genes chr2L 15483343 intergenic not near genes chr2L 15483450 intergenic not near genes chr2L_39_15480001 chr2L_15480001 RAL-301_125b 963 chr2L 15490029 15490046 chr2L 15490195 15490212 6 166 10.0 32.0 21.0 0.3 183 chr2L 15490029 intergenic not near genes chr2L 15490120 intergenic not near genes chr2L 15490212 intergenic not near genes chr2L_6_15490001 chr2L_15490001 RAL-301_125b 964 chr2L 15499867 15499905 chr2L 15500005 15500043 10 138 17.5 20.0 18.8 0.5 176 chr2L 15499867 intron lace + chr2L 15499955 intron lace + chr2L 15500043 intron lace + chr2L_10_15495001 chr2L_15495001 RAL-301_125b 965 chr2L 15513678 15513736 chr2L 15513830 15513888 15 151 18.0 21.0 19.5 0.7 210 chr2L 15513678 intergenic not near genes chr2L 15513783 intergenic not near genes chr2L 15513888 intergenic not near genes chr2L_15_15510001 chr2L_15510001 RAL-301_125b 966 chr2L 15540820 15540851 chr2L 15540974 15541005 6 154 24.0 25.5 24.8 0.2 185 chr2L 15540820 intergenic not near genes chr2L 15540912 intergenic not near genes chr2L 15541005 intergenic not near genes chr2L_6_15540001 chr2L_15540001 RAL-301_125b 967 chr2L 15542585 15542660 chr2L 15542727 15542802 32 142 16.5 22.5 19.5 1.6 217 chr2L 15542585 intergenic not near genes chr2L 15542694 intergenic not near genes chr2L 15542802 intergenic not near genes chr2L_32_15540001 chr2L_15540001 RAL-301_125b 968 chr2L 15586357 15586428 chr2L 15593463 15593530 297 36 7104 10.5 13.5 12.0 2.8 7173 chr2L 15586357 intergenic not near genes chr2L 15589944 intergenic not near genes chr2L 15593530 intergenic not near genes chr2L_36_15585001 chr2L_15585001 RAL-301_125b 969 chr2L 15598746 15598758 chr2L 15598875 15598887 6 129 31.0 26.0 28.5 0.2 141 chr2L 15598746 intergenic not near genes chr2L 15598816 intergenic not near genes chr2L 15598887 intergenic not near genes chr2L_6_15595001 chr2L_15595001 RAL-301_125b 970 chr2L 15732466 15732535 chr2L 15732611 15732682 9 146 19.0 20.5 19.8 0.4 216 chr2L 15732466 intron CycE - chr2L 15732574 intron CycE - chr2L 15732682 intron CycE - chr2L_9_15730001 chr2L_15730001 RAL-301_125b 971 chr2L 15734293 15734322 chr2L 15734422 15734450 9 128 5.5 20.5 13.0 0.6 157 chr2L 15734293 intron CycE - chr2L 15734372 intron CycE - chr2L 15734450 intron CycE - chr2L_9_15730001 chr2L_15730001 RAL-301_125b 972 chr2L 15750264 15750422 chr2L 15750398 15750549 17 127 3.5 1.5 2.5 4.9 285 chr2L 15750264 intron l(2)35Di - chr2L 15750406 intron l(2)35Di - chr2L 15750549 exon l(2)35Di - chr2L_17_15750001 chr2L_15750001 RAL-301_125b 973 chr2L 15783415 15783464 chr2L 15783511 15783591 14 117 25.0 24.0 24.5 0.5 176 chr2L 15783415 intergenic not near genes chr2L 15783503 intergenic not near genes chr2L 15783591 intergenic CG18109 + chr2L_14_15780001 chr2L_15780001 RAL-301_125b 974 chr2L 15790160 15790170 chr2L 15790286 15790331 4 152 17.5 3.5 10.5 0.3 171 chr2L 15790160 intergenic CG18109 + chr2L 15790246 intergenic CG18109 + chr2L 15790331 intergenic CG18109 + chr2L_4_15790001 chr2L_15790001 RAL-301_125b 975 chr2L 15790171 15790187 chr2L 15790282 15790348 5 151 13.0 3.5 8.2 0.5 177 chr2L 15790171 intergenic CG18109 + chr2L 15790260 intergenic CG18109 + chr2L 15790348 intergenic CG18109 + chr2L_5_15790001 chr2L_15790001 RAL-301_125b 976 chr2L 15790188 15790215 chr2L 15790259 15790376 12 151 8.0 6.0 7.0 1.5 188 chr2L 15790188 intergenic CG18109 + chr2L 15790282 intergenic CG18109 + chr2L 15790376 intergenic CG18109 + chr2L_12_15790001 chr2L_15790001 RAL-301_125b 977 chr2L 15823305 15823368 chr2L 15823431 15823494 11 126 20.0 26.5 23.2 0.5 189 chr2L 15823305 intergenic CR44601 - chr2L 15823400 intergenic CR44601 - chr2L 15823494 intergenic not near genes chr2L_11_15820001 chr2L_15820001 RAL-301_125b 978 chr2L 15826845 15826888 chr2L 15829288 15829332 Tabor 26 2443 9.0 15.5 12.2 2.0 2487 chr2L 15826845 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829332 intergenic not near genes chr2L_26_15825001 chr2L_15825001 RAL-301_125b 979 chr2L 15837091 15837154 chr2L 15837230 15837293 21 139 16.0 18.0 17.0 1.2 202 chr2L 15837091 intergenic not near genes chr2L 15837192 intergenic not near genes chr2L 15837293 intergenic not near genes chr2L_21_15835001 chr2L_15835001 RAL-301_125b 980 chr2L 15912085 15912117 chr2L 15912228 15912260 7 143 21.5 20.5 21.0 0.3 175 chr2L 15912085 intron beat-Ib - chr2L 15912172 intron beat-Ib - chr2L 15912260 intron beat-Ib - chr2L_7_15910001 chr2L_15910001 RAL-301_125b 981 chr2L 15935153 15935208 chr2L 15935292 15935348 24 138 9.0 0.0 4.5 4.4 195 chr2L 15935153 intron beat-Ib - chr2L 15935250 intron beat-Ib - chr2L 15935348 intron beat-Ib - chr2L_24_15935001 chr2L_15935001 RAL-301_125b 982 chr2L 15939153 15939224 chr2L 15939282 15939353 24 126 17.5 14.5 16.0 1.4 200 chr2L 15939153 intron beat-Ib - chr2L 15939253 intron beat-Ib - chr2L 15939353 intron beat-Ib - chr2L_24_15935001 chr2L_15935001 RAL-301_125b 983 chr2L 15955991 15956049 chr2L 15957508 15957566 hobo 20 1517 9.0 10.0 9.5 1.9 1575 chr2L 15955991 intron beat-Ib - chr2L 15956778 intron beat-Ib - chr2L 15957566 intron beat-Ib - chr2L_20_15955001 chr2L_15955001 RAL-301_125b 984 chr2L 15971925 15971998 chr2L 15972069 15972146 17 145 0.0 6.0 3.0 4.2 221 chr2L 15971925 intergenic not near genes chr2L 15972036 intergenic not near genes chr2L 15972146 intergenic not near genes chr2L_17_15970001 chr2L_15970001 RAL-301_125b 985 chr2L 16005629 16005667 chr2L 16005757 16005795 13 128 19.0 16.0 17.5 0.7 166 chr2L 16005629 intron beat-Ic + chr2L 16005712 intron beat-Ic + chr2L 16005795 intron,3` UTR beat-Ic +,CG31820 - chr2L_13_16005001 chr2L_16005001 RAL-301_125b 986 chr2L 16008652 16008662 chr2L 16008803 16008813 6 151 16.5 6.0 11.2 0.5 161 chr2L 16008652 intron beat-Ic + chr2L 16008732 intron beat-Ic + chr2L 16008813 intron beat-Ic + chr2L_6_16005001 chr2L_16005001 RAL-301_125b 987 chr2L 16008667 16008679 chr2L 16008795 16008807 5 137 12.0 6.0 9.0 0.5 140 chr2L 16008667 intron beat-Ic + chr2L 16008737 intron beat-Ic + chr2L 16008807 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 RAL-301_125b 988 chr2L 16018677 16018709 chr2L 16018806 16018838 20 128 14.5 5.5 10.0 1.8 161 chr2L 16018677 intron beat-Ic + chr2L 16018758 intron beat-Ic + chr2L 16018838 intron beat-Ic + chr2L_20_16015001 chr2L_16015001 RAL-301_125b 989 chr2L 16043512 16043591 chr2L 16043647 16043726 22 135 6.0 3.5 4.8 3.8 214 chr2L 16043512 intron,intron BicC +,CG45084 + chr2L 16043619 intron,intron BicC +,CG45084 + chr2L 16043726 intron,intron BicC +,CG45084 + chr2L_22_16040001 chr2L_16040001 RAL-301_125b 990 chr2L 16056107 16056158 chr2L 16056233 16056284 14 126 5.5 5.5 5.5 2.2 177 chr2L 16056107 intron beat-Ia + chr2L 16056196 intron beat-Ia + chr2L 16056284 exon beat-Ia + chr2L_14_16055001 chr2L_16055001 RAL-301_125b 991 chr2L 16059910 16059979 chr2L 16060058 16060127 20 148 8.5 8.0 8.2 2.2 217 chr2L 16059910 intron beat-Ia + chr2L 16060018 intron beat-Ia + chr2L 16060127 intron beat-Ia + chr2L_20_16060001 chr2L_16060001 RAL-301_125b 992 chr2L 16062237 16062296 chr2L 16062599 16062658 10 362 18.5 26.0 22.2 0.4 421 chr2L 16062237 intron beat-Ia + chr2L 16062448 intron beat-Ia + chr2L 16062658 intron beat-Ia + chr2L_10_16060001 chr2L_16060001 RAL-301_125b 993 chr2L 16069244 16069283 chr2L 16069376 16069379 4 121 22.5 22.0 22.2 0.2 135 chr2L 16069244 intron beat-Ia + chr2L 16069312 intron beat-Ia + chr2L 16069379 intron beat-Ia + chr2L_4_16065001 chr2L_16065001 RAL-301_125b 994 chr2L 9723019 9723021 chr2L 16071771 16071771 5 6348751 21.0 29.5 25.2 0.2 6348752 chr2L 9723019 intron Nckx30C - chr2L 12897395 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_5_12895001 chr2L_12895001 RAL-301_125b 995 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 47 145889 30.0 34.5 32.2 1.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_47_16140001 chr2L_16140001 RAL-301_125b 996 chr2L 16078473 16078542 chr2L 16078603 16078672 8 130 18.0 17.5 17.8 0.4 199 chr2L 16078473 intron beat-Ia + chr2L 16078572 intron beat-Ia + chr2L 16078672 intron beat-Ia + chr2L_8_16075001 chr2L_16075001 RAL-301_125b 997 chr2L 16082289 16082350 chr2L 16082414 16082484 14 133 10.5 12.0 11.2 1.1 195 chr2L 16082289 intergenic not near genes chr2L 16082386 intergenic not near genes chr2L 16082484 intergenic not near genes chr2L_14_16080001 chr2L_16080001 RAL-301_125b 998 chr2L 16098879 16098943 chr2L 16099017 16099081 10 138 17.5 16.0 16.8 0.6 202 chr2L 16098879 intergenic not near genes chr2L 16098980 intergenic not near genes chr2L 16099081 intergenic not near genes chr2L_10_16095001 chr2L_16095001 RAL-301_125b 999 chr2L 16131154 16131182 chr2L 16131308 16131315 5 148 11.5 16.5 14.0 0.3 161 chr2L 16131154 intergenic not near genes chr2L 16131234 intergenic not near genes chr2L 16131315 intergenic not near genes chr2L_5_16130001 chr2L_16130001 RAL-301_125b 1000 chr2L 16131184 16131217 chr2L 16131302 16131312 8 136 9.5 15.5 12.5 0.6 128 chr2L 16131184 intergenic not near genes chr2L 16131248 intergenic not near genes chr2L 16131312 intergenic not near genes chr2L_8_16130001 chr2L_16130001 RAL-301_125b 1001 chr2L 16137868 16137888 chr2L 16138003 16138023 10 135 9.5 1.0 5.2 1.6 155 chr2L 16137868 intergenic not near genes chr2L 16137946 intergenic not near genes chr2L 16138023 intergenic not near genes chr2L_10_16135001 chr2L_16135001 RAL-301_125b 1002 chr2L 16141098 16141185 chr2L 16146369 16146442 copia 24 5257 8.0 7.0 7.5 2.8 5344 chr2L 16141098 intergenic not near genes chr2L 16143770 intergenic not near genes chr2L 16146442 intergenic not near genes chr2L_24_16140001 chr2L_16140001 RAL-301_125b 1003 chr2L 16146650 16146723 chr2L 16146783 16146856 20 132 18.0 18.0 18.0 1.1 206 chr2L 16146650 intergenic not near genes chr2L 16146753 intergenic not near genes chr2L 16146856 intergenic not near genes chr2L_20_16145001 chr2L_16145001 RAL-301_125b 1004 chr2L 16151628 16151651 chr2L 16151770 16151793 8 142 18.0 11.5 14.8 0.5 165 chr2L 16151628 intergenic not near genes chr2L 16151710 intergenic not near genes chr2L 16151793 intergenic not near genes chr2L_8_16150001 chr2L_16150001 RAL-301_125b 1005 chr2L 16153697 16153746 chr2L 16160801 16160850 297 23 7107 7.0 6.0 6.5 3.1 7153 chr2L 16153697 intergenic not near genes chr2L 16157274 intergenic not near genes chr2L 16160850 intergenic not near genes chr2L_23_16155001 chr2L_16155001 RAL-301_125b 1006 chr2L 16163586 16163591 chr2L 16163712 16163717 4 126 2.0 4.0 3.0 1.0 131 chr2L 16163586 intergenic not near genes chr2L 16163652 intergenic not near genes chr2L 16163717 intergenic not near genes chr2L_4_16160001 chr2L_16160001 RAL-301_125b 1007 chr2L 16207023 16207091 chr2L 16207150 16207218 22 127 4.0 4.0 4.0 4.4 195 chr2L 16207023 intergenic not near genes chr2L 16207120 intergenic not near genes chr2L 16207218 intergenic not near genes chr2L_22_16205001 chr2L_16205001 RAL-301_125b 1008 chr2L 16213271 16213296 chr2L 16213406 16213431 13 135 15.5 1.0 8.2 1.4 160 chr2L 16213271 3` UTR CG31819 + chr2L 16213351 intergenic CG31819 + chr2L 16213431 intergenic CG31819 + chr2L_13_16210001 chr2L_16210001 RAL-301_125b 1009 chr2L 16215073 16215128 chr2L 16215211 16215256 7 129 7.0 14.5 10.8 0.6 183 chr2L 16215073 intergenic not near genes chr2L 16215164 intergenic not near genes chr2L 16215256 intergenic not near genes chr2L_7_16215001 chr2L_16215001 RAL-301_125b 1010 chr2L 9084337 9084340 chr2L 16217660 16217660 8 7133321 35.5 34.5 35.0 0.2 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-301_125b 1011 chr2L 9723025 9723026 chr2L 16217660 16217660 6 6494635 21.0 34.5 27.8 0.2 6494635 chr2L 9723025 intron Nckx30C - chr2L 12970342 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12970001 chr2L_12970001 RAL-301_125b 1012 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 39 145889 30.0 34.5 32.2 1.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_39_16140001 chr2L_16140001 RAL-301_125b 1013 chr2L 16217660 16217660 chr2L 18622718 18622718 8 2405058 39.0 36.5 37.8 0.2 2405058 chr2L 16217660 intergenic not near genes chr2L 17420189 intron Dif - chr2L 18622718 intron MESR3 + chr2L_8_17420001 chr2L_17420001 RAL-301_125b 1014 chr2L 16226132 16226214 chr2L 16226269 16226351 33 137 6.5 5.0 5.8 4.9 219 chr2L 16226132 intergenic not near genes chr2L 16226242 intergenic not near genes chr2L 16226351 intergenic not near genes chr2L_33_16225001 chr2L_16225001 RAL-301_125b 1015 chr2L 16242023 16242054 chr2L 16242165 16242194 6 141 18.5 18.0 18.2 0.3 171 chr2L 16242023 5` UTR CG42818 + chr2L 16242108 exon CG42818 + chr2L 16242194 exon CG42818 + chr2L_6_16240001 chr2L_16240001 RAL-301_125b 1016 chr2L 16243173 16243373 chr2L 16243300 16243503 9 129 17.5 16.0 16.8 0.5 330 chr2L 16243173 exon CG42818 + chr2L 16243338 exon CG42818 + chr2L 16243503 exon CG42818 + chr2L_9_16240001 chr2L_16240001 RAL-301_125b 1017 chr2L 16243653 16243856 chr2L 16243786 16244001 42 138 0.0 0.0 0.0 42.0 348 chr2L 16243653 exon CG42818 + chr2L 16243827 exon CG42818 + chr2L 16244001 exon CG42818 + chr2L_42_16240001 chr2L_16240001 RAL-301_125b 1018 chr2L 16244933 16244974 chr2L 16245067 16245108 7 133 21.0 23.0 22.0 0.3 175 chr2L 16244933 exon CG42818 + chr2L 16245020 exon CG42818 + chr2L 16245108 exon CG42818 + chr2L_7_16245001 chr2L_16245001 RAL-301_125b 1019 chr2L 16254860 16254915 chr2L 16255169 16255224 9 309 21.5 26.5 24.0 0.4 364 chr2L 16254860 intron PRL-1 - chr2L 16255042 intron PRL-1 - chr2L 16255224 intron PRL-1 - chr2L_9_16255001 chr2L_16255001 RAL-301_125b 1020 chr2L 16280235 16280279 chr2L 16281427 16281477 1360 24 1211 13.0 8.5 10.8 2.0 1242 chr2L 16280235 intron crp - chr2L 16280856 intron crp - chr2L 16281477 intron crp - chr2L_24_16280001 chr2L_16280001 RAL-301_125b 1021 chr2L 16309228 16309296 chr2L 16309367 16309435 23 139 15.0 20.5 17.8 1.2 207 chr2L 16309228 3` UTR Syx5 + chr2L 16309332 3` UTR cni - chr2L 16309435 3` UTR cni - chr2L_23_16305001 chr2L_16305001 RAL-301_125b 1022 chr2L 16354533 16354782 chr2L 16354679 16354924 14 143 4.0 19.0 11.5 1.1 391 chr2L 16354533 3` UTR CG4455 + chr2L 16354728 intergenic CaBP1 -,CG4455 + chr2L 16354924 3` UTR CaBP1 - chr2L_14_16350001 chr2L_16350001 RAL-301_125b 1023 chr2L 16363932 16363969 chr2L 16364227 16364265 6 296 13.0 22.5 17.8 0.3 333 chr2L 16363932 intergenic not near genes chr2L 16364098 intergenic not near genes chr2L 16364265 intergenic not near genes chr2L_6_16360001 chr2L_16360001 RAL-301_125b 1024 chr2L 16375347 16375367 chr2L 16375487 16375507 4 140 28.0 12.5 20.2 0.2 160 chr2L 16375347 intergenic not near genes chr2L 16375427 intergenic not near genes chr2L 16375507 intergenic not near genes chr2L_4_16375001 chr2L_16375001 RAL-301_125b 1025 chr2L 16391760 16391829 chr2L 16391886 16391955 16 126 14.5 18.0 16.2 0.9 195 chr2L 16391760 intergenic not near genes chr2L 16391858 intergenic not near genes chr2L 16391955 intergenic not near genes chr2L_16_16390001 chr2L_16390001 RAL-301_125b 1026 chr2L 16434061 16434128 chr2L 16434193 16434260 11 132 26.0 20.0 23.0 0.5 199 chr2L 16434061 intron CG5888 - chr2L 16434160 intron CG5888 - chr2L 16434260 intron CG5888 - chr2L_11_16430001 chr2L_16430001 RAL-301_125b 1027 chr2L 16458778 16458853 chr2L 16459024 16459100 9 246 0.5 5.5 3.0 2.2 322 chr2L 16458778 intergenic not near genes chr2L 16458939 intergenic not near genes chr2L 16459100 intergenic not near genes chr2L_9_16455001 chr2L_16455001 RAL-301_125b 1028 chr2L 16504975 16505015 chr2L 16505135 16505175 17 160 5.5 17.0 11.2 1.4 200 chr2L 16504975 intron Tpr2 + chr2L 16505075 intron Tpr2 + chr2L 16505175 intron Tpr2 + chr2L_17_16505001 chr2L_16505001 RAL-301_125b 1029 chr2L 16507898 16507967 chr2L 16508031 16508105 5 137 9.0 16.0 12.5 0.4 207 chr2L 16507898 intergenic CG5953 -,Tpr2 + chr2L 16508002 intergenic CG5953 -,Tpr2 + chr2L 16508105 3` UTR CG5953 - chr2L_5_16505001 chr2L_16505001 RAL-301_125b 1030 chr2L 16511910 16511920 chr2L 16519167 16519177 HMS-Beagle 5 7257 23.0 14.0 18.5 0.3 7267 chr2L 16511910 intron CG5953 - chr2L 16515544 intron CG5953 - chr2L 16519177 intron CG5953 - chr2L_5_16515001 chr2L_16515001 RAL-301_125b 1031 chr2L 16511921 16511976 chr2L 16519085 16519208 HMS-Beagle 23 7224 10.0 4.0 7.0 2.9 7287 chr2L 16511921 intron CG5953 - chr2L 16515564 intron CG5953 - chr2L 16519208 intron CG5953 - chr2L_23_16515001 chr2L_16515001 RAL-301_125b 1032 chr2L 16522026 16522085 chr2L 16522174 16522217 6 140 0.0 0.5 0.2 5.0 191 chr2L 16522026 intron CG5953 - chr2L 16522122 intron CG5953 - chr2L 16522217 intron CG5953 - chr2L_6_16520001 chr2L_16520001 RAL-301_125b 1033 chr2L 16537284 16537340 chr2L 16537410 16537466 21 126 10.0 7.5 8.8 2.1 182 chr2L 16537284 intergenic not near genes chr2L 16537375 intergenic not near genes chr2L 16537466 intergenic not near genes chr2L_21_16535001 chr2L_16535001 RAL-301_125b 1034 chr2L 16548454 16548470 chr2L 16548626 16548642 5 172 37.0 15.0 26.0 0.2 188 chr2L 16548454 intron CG42389 + chr2L 16548548 intron CG42389 + chr2L 16548642 intron CG42389 + chr2L_5_16545001 chr2L_16545001 RAL-301_125b 1035 chr2L 16550609 16550676 chr2L 16550735 16550802 12 126 18.5 18.5 18.5 0.6 193 chr2L 16550609 intron CG42389 + chr2L 16550706 intron CG42389 + chr2L 16550802 intron CG42389 + chr2L_12_16550001 chr2L_16550001 RAL-301_125b 1036 chr2L 16562233 16562305 chr2L 16562366 16562438 4 128 28.0 29.0 28.5 0.1 205 chr2L 16562233 intron CG42389 + chr2L 16562336 intron CG42389 + chr2L 16562438 intron CG42389 + chr2L_4_16560001 chr2L_16560001 RAL-301_125b 1037 chr2L 16573591 16573651 chr2L 16573730 16573790 8 138 11.0 24.5 17.8 0.4 199 chr2L 16573591 intron CG42389 + chr2L 16573690 intron CG42389 + chr2L 16573790 intron CG42389 + chr2L_8_16570001 chr2L_16570001 RAL-301_125b 1038 chr2L 16583065 16583126 chr2L 16583203 16583264 13 138 12.5 18.0 15.2 0.8 199 chr2L 16583065 intron CG42389 + chr2L 16583164 intron CG42389 + chr2L 16583264 intron CG42389 + chr2L_13_16580001 chr2L_16580001 RAL-301_125b 1039 chr2L 16583504 16583571 chr2L 16583688 16583755 16 183 16.0 14.0 15.0 1.0 251 chr2L 16583504 intron CG42389 + chr2L 16583630 intron CG42389 + chr2L 16583755 intron CG42389 + chr2L_16_16580001 chr2L_16580001 RAL-301_125b 1040 chr2L 16593978 16594117 chr2L 16594105 16594257 29 132 0.0 1.5 0.8 16.1 279 chr2L 16593978 intron CG42389 + chr2L 16594118 intron CG42389 + chr2L 16594257 intron CG42389 + chr2L_29_16590001 chr2L_16590001 RAL-301_125b 1041 chr2L 16616549 16616609 chr2L 16616677 16616743 20 132 11.0 14.0 12.5 1.5 194 chr2L 16616549 intron CG42389 + chr2L 16616646 intron CG42389 + chr2L 16616743 intron CG42389 + chr2L_20_16615001 chr2L_16615001 RAL-301_125b 1042 chr2L 16670370 16670446 chr2L 16670496 16670573 35 126 8.0 9.5 8.8 3.6 203 chr2L 16670370 intron Trpgamma - chr2L 16670472 intron Trpgamma - chr2L 16670573 intron Trpgamma - chr2L_35_16670001 chr2L_16670001 RAL-301_125b 1043 chr2L 16672334 16672370 chr2L 16672468 16672509 7 138 24.0 11.0 17.5 0.4 175 chr2L 16672334 intron Trpgamma - chr2L 16672422 intron Trpgamma - chr2L 16672509 intron Trpgamma - chr2L_7_16670001 chr2L_16670001 RAL-301_125b 1044 chr2L 16694091 16694160 chr2L 16694227 16694265 14 125 17.0 21.0 19.0 0.7 174 chr2L 16694091 intron grp + chr2L 16694178 intron grp + chr2L 16694265 intron grp + chr2L_14_16690001 chr2L_16690001 RAL-301_125b 1045 chr2L 16695209 16695282 chr2L 16695343 16695416 16 134 15.5 12.5 14.0 1.1 207 chr2L 16695209 intron grp + chr2L 16695312 intron grp + chr2L 16695416 intron grp + chr2L_16_16695001 chr2L_16695001 RAL-301_125b 1046 chr2L 16697017 16697254 chr2L 16697217 16697393 19 199 0.5 0.0 0.2 15.8 376 chr2L 16697017 intron grp + chr2L 16697205 intron grp + chr2L 16697393 intron,3` UTR grp +,CR44975 - chr2L_19_16695001 chr2L_16695001 RAL-301_125b 1047 chr2L 16706733 16706772 chr2L 16706850 16706899 12 126 22.5 23.0 22.8 0.5 166 chr2L 16706733 intron CG31808 - chr2L 16706816 intron CG31808 - chr2L 16706899 intron CG31808 - chr2L_12_16705001 chr2L_16705001 RAL-301_125b 1048 chr2L 16709027 16709104 chr2L 16709161 16709238 27 134 6.5 6.5 6.5 3.6 211 chr2L 16709027 intron CG31808 - chr2L 16709132 intron CG31808 - chr2L 16709238 intron CG31808 - chr2L_27_16705001 chr2L_16705001 RAL-301_125b 1049 chr2L 16718904 16718995 chr2L 16719068 16719134 7 155 11.5 15.0 13.2 0.5 230 chr2L 16718904 intron Cyt-c-d + chr2L 16719019 intron Cyt-c-d + chr2L 16719134 5` UTR Cyt-c-d + chr2L_7_16715001 chr2L_16715001 RAL-301_125b 1050 chr2L 16721563 16721624 chr2L 16721689 16721750 10 126 23.5 29.0 26.2 0.4 187 chr2L 16721563 intron Cyt-c-p + chr2L 16721656 intron Cyt-c-p + chr2L 16721750 intron Cyt-c-p + chr2L_10_16720001 chr2L_16720001 RAL-301_125b 1051 chr2L 16728872 16728921 chr2L 16729557 16729606 24 685 23.5 17.5 20.5 1.1 734 chr2L 16728872 intergenic not near genes chr2L 16729239 intergenic not near genes chr2L 16729606 intergenic CG31812 + chr2L_24_16725001 chr2L_16725001 RAL-301_125b 1052 chr2L 16764929 16764984 chr2L 16765059 16765114 9 130 23.0 24.0 23.5 0.4 185 chr2L 16764929 intergenic not near genes chr2L 16765022 intergenic not near genes chr2L 16765114 intergenic not near genes chr2L_9_16765001 chr2L_16765001 RAL-301_125b 1053 chr2L 16809622 16809657 chr2L 16809800 16809835 4 178 0.0 0.0 0.0 4.0 213 chr2L 16809622 intron,intron CG13280 -,CG13272 + chr2L 16809728 intron,intron CG13280 -,CG13272 + chr2L 16809835 intron,intron CG13280 -,CG13272 + chr2L_4_16805001 chr2L_16805001 RAL-301_125b 1054 chr2L 16840969 16841024 chr2L 16841096 16841145 5 124 24.0 26.0 25.0 0.2 176 chr2L 16840969 intron,intron SclA +,SclB + chr2L 16841057 intron,intron SclA +,SclB + chr2L 16841145 intron,intron SclA +,SclB + chr2L_5_16840001 chr2L_16840001 RAL-301_125b 1055 chr2L 16949571 16949646 chr2L 16949705 16949780 16 134 15.5 13.0 14.2 1.1 209 chr2L 16949571 intron CR44393 - chr2L 16949676 intron CR44393 - chr2L 16949780 intron CR44393 - chr2L_16_16945001 chr2L_16945001 RAL-301_125b 1056 chr2L 16952067 16952144 chr2L 16952206 16952280 13 138 15.0 20.5 17.8 0.7 213 chr2L 16952067 intergenic not near genes chr2L 16952174 intergenic not near genes chr2L 16952280 intergenic not near genes chr2L_13_16950001 chr2L_16950001 RAL-301_125b 1057 chr2L 16958061 16958124 chr2L 16962899 16962962 Doc 19 4838 10.0 10.0 10.0 1.7 4901 chr2L 16958061 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962962 intergenic not near genes chr2L_19_16960001 chr2L_16960001 RAL-301_125b 1058 chr2L 17000103 17000142 chr2L 17000275 17000314 5 172 21.5 22.5 22.0 0.2 211 chr2L 17000103 intergenic not near genes chr2L 17000208 intergenic not near genes chr2L 17000314 intergenic not near genes chr2L_5_17000001 chr2L_17000001 RAL-301_125b 1059 chr2L 17005368 17005390 chr2L 17005515 17005537 5 147 15.0 13.5 14.2 0.3 169 chr2L 17005368 intergenic not near genes chr2L 17005452 intergenic not near genes chr2L 17005537 intergenic not near genes chr2L_5_17005001 chr2L_17005001 RAL-301_125b 1060 chr2L 17005392 17005427 chr2L 17005513 17005574 13 145 12.0 13.5 12.8 0.9 182 chr2L 17005392 intergenic not near genes chr2L 17005483 intergenic not near genes chr2L 17005574 intergenic not near genes chr2L_13_17005001 chr2L_17005001 RAL-301_125b 1061 chr2L 17032452 17032521 chr2L 17032587 17032656 19 135 18.0 19.5 18.8 1.0 204 chr2L 17032452 intergenic not near genes chr2L 17032554 intergenic not near genes chr2L 17032656 intergenic not near genes chr2L_19_17030001 chr2L_17030001 RAL-301_125b 1062 chr2L 17033868 17033939 chr2L 17034004 17034075 14 136 21.0 22.0 21.5 0.6 207 chr2L 17033868 intergenic not near genes chr2L 17033972 intergenic not near genes chr2L 17034075 intergenic not near genes chr2L_14_17030001 chr2L_17030001 RAL-301_125b 1063 chr2L 17052365 17052439 chr2L 17052527 17052601 16 162 17.0 16.0 16.5 0.9 236 chr2L 17052365 intergenic not near genes chr2L 17052483 intergenic not near genes chr2L 17052601 intergenic not near genes chr2L_16_17050001 chr2L_17050001 RAL-301_125b 1064 chr2L 17058395 17058406 chr2L 17058598 17058609 4 203 24.5 23.0 23.8 0.2 214 chr2L 17058395 intergenic not near genes chr2L 17058502 intergenic not near genes chr2L 17058609 intergenic not near genes chr2L_4_17055001 chr2L_17055001 RAL-301_125b 1065 chr2L 17062711 17062788 chr2L 17062843 17062920 11 132 10.5 8.0 9.2 1.1 209 chr2L 17062711 intergenic not near genes chr2L 17062816 intergenic not near genes chr2L 17062920 intergenic not near genes chr2L_11_17060001 chr2L_17060001 RAL-301_125b 1066 chr2L 17070151 17070191 chr2L 17070297 17070337 9 146 19.5 12.0 15.8 0.5 186 chr2L 17070151 intergenic not near genes chr2L 17070244 intergenic not near genes chr2L 17070337 intergenic not near genes chr2L_9_17070001 chr2L_17070001 RAL-301_125b 1067 chr2L 17120800 17120870 chr2L 17120929 17120988 17 128 18.5 19.0 18.8 0.9 188 chr2L 17120800 intergenic not near genes chr2L 17120894 intergenic not near genes chr2L 17120988 intergenic not near genes chr2L_17_17120001 chr2L_17120001 RAL-301_125b 1068 chr2L 17144292 17144308 chr2L 17152010 17152026 opus 6 7718 11.5 5.0 8.2 0.7 7734 chr2L 17144292 intron,intron CG34106 +,beat-IIIa + chr2L 17148159 intron,intron CG34106 +,beat-IIIa + chr2L 17152026 intron,intron CG34106 +,beat-IIIa + chr2L_6_17145001 chr2L_17145001 RAL-301_125b 1069 chr2L 17158688 17158742 chr2L 17158841 17158895 9 152 15.5 13.5 14.5 0.6 207 chr2L 17158688 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158792 intron,intron CG34106 +,beat-IIIa + chr2L 17158895 intron,intron CG34106 +,beat-IIIa + chr2L_9_17155001 chr2L_17155001 RAL-301_125b 1070 chr2L 17167524 17167595 chr2L 17167815 17167885 pogo 20 290 3.5 7.5 5.5 3.1 361 chr2L 17167524 intron,intron CG34106 +,beat-IIIa + chr2L 17167704 intron,intron CG34106 +,beat-IIIa + chr2L 17167885 intron,intron CG34106 +,beat-IIIa + chr2L_20_17165001 chr2L_17165001 RAL-301_125b 1071 chr2L 17168151 17168217 chr2L 17168979 17169045 15 827 20.0 21.5 20.8 0.7 894 chr2L 17168151 intron,intron CG34106 +,beat-IIIa + chr2L 17168598 intron,intron CG34106 +,beat-IIIa + chr2L 17169045 intron,intron CG34106 +,beat-IIIa + chr2L_15_17165001 chr2L_17165001 RAL-301_125b 1072 chr2L 17199124 17199183 chr2L 17200641 17200700 hobo 14 1517 5.5 4.0 4.8 2.4 1576 chr2L 17199124 intron beat-IIIc - chr2L 17199912 intron beat-IIIc - chr2L 17200700 intron beat-IIIc - chr2L_14_17195001 chr2L_17195001 RAL-301_125b 1073 chr2L 17261167 17261217 chr2L 17261308 17261358 7 141 16.0 14.0 15.0 0.4 191 chr2L 17261167 intergenic beat-IIIc - chr2L 17261262 intergenic not near genes chr2L 17261358 intergenic not near genes chr2L_7_17260001 chr2L_17260001 RAL-301_125b 1074 chr2L 17264702 17264767 chr2L 17264832 17264897 23 130 17.0 10.0 13.5 1.6 195 chr2L 17264702 intergenic not near genes chr2L 17264800 intergenic not near genes chr2L 17264897 intergenic not near genes chr2L_23_17260001 chr2L_17260001 RAL-301_125b 1075 chr2L 17273150 17273216 chr2L 17277983 17278049 F-element 23 4831 9.5 4.5 7.0 2.9 4899 chr2L 17273150 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278049 intergenic not near genes chr2L_23_17275001 chr2L_17275001 RAL-301_125b 1076 chr2L 17286981 17287072 chr2L 17287137 17287205 6 152 0.0 1.0 0.5 4.0 224 chr2L 17286981 exon CG15140 + chr2L 17287093 exon CG15140 + chr2L 17287205 exon CG15140 + chr2L_6_17285001 chr2L_17285001 RAL-301_125b 1077 chr2L 17289197 17289230 chr2L 17289309 17289359 8 122 17.5 6.0 11.8 0.6 162 chr2L 17289197 intergenic not near genes chr2L 17289278 intergenic not near genes chr2L 17289359 intergenic not near genes chr2L_8_17285001 chr2L_17285001 RAL-301_125b 1078 chr2L 17292324 17292381 chr2L 17292454 17292512 5 130 27.0 27.0 27.0 0.2 188 chr2L 17292324 intergenic CG6380 - chr2L 17292418 intergenic CG6380 - chr2L 17292512 intergenic CG6380 - chr2L_5_17290001 chr2L_17290001 RAL-301_125b 1079 chr2L 17327865 17327929 chr2L 17328001 17328065 20 134 12.0 9.0 10.5 1.7 200 chr2L 17327865 intergenic not near genes chr2L 17327965 intergenic not near genes chr2L 17328065 intergenic not near genes chr2L_20_17325001 chr2L_17325001 RAL-301_125b 1080 chr2L 17328398 17328489 chr2L 17328560 17328639 14 153 22.5 30.0 26.2 0.5 241 chr2L 17328398 intergenic not near genes chr2L 17328518 intergenic not near genes chr2L 17328639 intergenic not near genes chr2L_14_17325001 chr2L_17325001 RAL-301_125b 1081 chr2L 17329028 17329077 chr2L 17329206 17329255 19 178 20.5 17.5 19.0 0.9 227 chr2L 17329028 intergenic not near genes chr2L 17329142 intergenic not near genes chr2L 17329255 intergenic not near genes chr2L_19_17325001 chr2L_17325001 RAL-301_125b 1082 chr2L 17344689 17344696 chr2L 17344848 17344855 4 159 22.0 24.5 23.2 0.2 166 chr2L 17344689 intergenic not near genes chr2L 17344772 intergenic not near genes chr2L 17344855 intergenic not near genes chr2L_4_17340001 chr2L_17340001 RAL-301_125b 1083 chr2L 17344705 17344761 chr2L 17344844 17344920 14 157 14.5 23.5 19.0 0.7 215 chr2L 17344705 intergenic not near genes chr2L 17344812 intergenic not near genes chr2L 17344920 intergenic not near genes chr2L_14_17340001 chr2L_17340001 RAL-301_125b 1084 chr2L 17348299 17348370 chr2L 17348596 17348667 18 296 19.0 11.5 15.2 1.1 368 chr2L 17348299 intergenic not near genes chr2L 17348483 intergenic not near genes chr2L 17348667 intergenic not near genes chr2L_18_17345001 chr2L_17345001 RAL-301_125b 1085 chr2L 17379661 17379702 chr2L 17379796 17379837 18 135 8.0 8.0 8.0 2.0 176 chr2L 17379661 intron Lrch - chr2L 17379749 intron Lrch - chr2L 17379837 intron Lrch - chr2L_18_17375001 chr2L_17375001 RAL-301_125b 1086 chr2L 17397962 17398021 chr2L 17398092 17398161 6 134 8.5 18.0 13.2 0.4 199 chr2L 17397962 intron CLIP-190 + chr2L 17398062 intron CLIP-190 + chr2L 17398161 intron CLIP-190 + chr2L_6_17395001 chr2L_17395001 RAL-301_125b 1087 chr2L 17419250 17419264 chr2L 17419376 17419390 9 126 27.5 15.5 21.5 0.4 140 chr2L 17419250 intron Dif - chr2L 17419320 intron Dif - chr2L 17419390 intron Dif - chr2L_9_17415001 chr2L_17415001 RAL-301_125b 1088 chr2L 17420848 17420912 chr2L 17420979 17421043 11 131 10.5 15.0 12.8 0.8 195 chr2L 17420848 intron Dif - chr2L 17420946 intron Dif - chr2L 17421043 intron Dif - chr2L_11_17420001 chr2L_17420001 RAL-301_125b 1089 chr2L 17425721 17425794 chr2L 17425898 17425971 10 177 16.5 33.5 25.0 0.4 250 chr2L 17425721 intron Dif - chr2L 17425846 intron Dif - chr2L 17425971 intron Dif - chr2L_10_17425001 chr2L_17425001 RAL-301_125b 1090 chr2L 17432591 17432654 chr2L 17432718 17432781 13 127 14.0 14.0 14.0 0.9 190 chr2L 17432591 intron Dif - chr2L 17432686 intron Dif - chr2L 17432781 intron Dif - chr2L_13_17430001 chr2L_17430001 RAL-301_125b 1091 chr2L 17456329 17456429 chr2L 17456486 17456560 18 134 11.5 6.5 9.0 1.8 231 chr2L 17456329 intron CG5050 + chr2L 17456444 intron CG5050 + chr2L 17456560 intron CG5050 + chr2L_18_17455001 chr2L_17455001 RAL-301_125b 1092 chr2L 17503177 17503246 chr2L 17503304 17503373 37 127 10.0 6.0 8.0 4.1 196 chr2L 17503177 intron Dhc36C + chr2L 17503275 intron Dhc36C + chr2L 17503373 intron Dhc36C + chr2L_37_17500001 chr2L_17500001 RAL-301_125b 1093 chr2L 17533387 17533446 chr2L 17533524 17533583 12 137 8.5 8.0 8.2 1.3 196 chr2L 17533387 intergenic not near genes chr2L 17533485 intergenic not near genes chr2L 17533583 intergenic not near genes chr2L_12_17530001 chr2L_17530001 RAL-301_125b 1094 chr2L 17538282 17538342 chr2L 17538627 17538687 11 345 33.5 28.0 30.8 0.3 405 chr2L 17538282 intergenic not near genes chr2L 17538484 intergenic not near genes chr2L 17538687 intergenic not near genes chr2L_11_17535001 chr2L_17535001 RAL-301_125b 1095 chr2L 17543548 17543607 chr2L 17543691 17543750 7 143 14.0 14.5 14.2 0.5 202 chr2L 17543548 intergenic not near genes chr2L 17543649 intergenic not near genes chr2L 17543750 intergenic not near genes chr2L_7_17540001 chr2L_17540001 RAL-301_125b 1096 chr2L 17551288 17551314 chr2L 17551432 17551458 11 144 18.0 6.0 12.0 0.8 170 chr2L 17551288 intergenic not near genes chr2L 17551373 intergenic not near genes chr2L 17551458 intergenic not near genes chr2L_11_17550001 chr2L_17550001 RAL-301_125b 1097 chr2L 17564116 17564179 chr2L 17564243 17564312 9 130 26.5 24.5 25.5 0.3 196 chr2L 17564116 intergenic not near genes chr2L 17564214 intergenic not near genes chr2L 17564312 intergenic not near genes chr2L_9_17560001 chr2L_17560001 RAL-301_125b 1098 chr2L 17565332 17565360 chr2L 17565473 17565501 8 141 31.5 13.0 22.2 0.3 169 chr2L 17565332 intergenic not near genes chr2L 17565416 intergenic not near genes chr2L 17565501 intergenic not near genes chr2L_8_17565001 chr2L_17565001 RAL-301_125b 1099 chr2L 17565384 17565407 chr2L 17565525 17565548 6 141 21.0 22.0 21.5 0.3 164 chr2L 17565384 intergenic not near genes chr2L 17565466 intergenic not near genes chr2L 17565548 intergenic not near genes chr2L_6_17565001 chr2L_17565001 RAL-301_125b 1100 chr2L 17577695 17577699 chr2L 17577821 17577825 4 126 33.0 26.0 29.5 0.1 130 chr2L 17577695 intergenic not near genes chr2L 17577760 intergenic not near genes chr2L 17577825 intergenic not near genes chr2L_4_17575001 chr2L_17575001 RAL-301_125b 1101 chr2L 17584053 17584123 chr2L 17584891 17584961 15 837 39.5 22.5 31.0 0.5 908 chr2L 17584053 5` UTR CR45111 + chr2L 17584507 intergenic CR45111 +,CR45112 - chr2L 17584961 3` UTR CR45112 - chr2L_15_17580001 chr2L_17580001 RAL-301_125b 1102 chr2L 17583879 17583910 chr2L 17584787 17584800 4 894 39.5 25.0 32.2 0.1 921 chr2L 17583879 intergenic CR45111 + chr2L 17584340 5` UTR CR45111 + chr2L 17584800 3` UTR CR45112 - chr2L_4_17580001 chr2L_17580001 RAL-301_125b 1103 chr2L 17583876 17583941 chr2L 17584801 17584841 10 906 44.0 25.5 34.8 0.3 965 chr2L 17583876 intergenic CR45111 + chr2L 17584358 5` UTR CR45111 + chr2L 17584841 3` UTR CR45112 - chr2L_10_17580001 chr2L_17580001 RAL-301_125b 1104 chr2L 17626434 17626491 chr2L 17626855 17626918 10 424 23.5 20.5 22.0 0.4 484 chr2L 17626434 intergenic CG15147 - chr2L 17626676 intergenic CG15147 - chr2L 17626918 intergenic not near genes chr2L_10_17625001 chr2L_17625001 RAL-301_125b 1105 chr2L 17687468 17687521 chr2L 17692263 17692316 F-element 23 4795 8.5 5.5 7.0 2.9 4848 chr2L 17687468 intron CadN - chr2L 17689892 intron CadN - chr2L 17692316 intron CadN - chr2L_23_17685001 chr2L_17685001 RAL-301_125b 1106 chr2L 17723742 17723801 chr2L 17723885 17723944 23 143 11.5 9.5 10.5 2.0 202 chr2L 17723742 intron CadN - chr2L 17723843 intron CadN - chr2L 17723944 intron CadN - chr2L_23_17720001 chr2L_17720001 RAL-301_125b 1107 chr2L 17724866 17724939 chr2L 17725007 17725056 11 134 34.5 30.5 32.5 0.3 190 chr2L 17724866 intron CadN - chr2L 17724961 intron CadN - chr2L 17725056 intron CadN - chr2L_11_17720001 chr2L_17720001 RAL-301_125b 1108 chr2L 17727827 17727867 chr2L 17729338 17729364 hobo 18 1515 11.0 11.5 11.2 1.5 1537 chr2L 17727827 intron CadN - chr2L 17728596 intron CadN - chr2L 17729364 intron CadN - chr2L_18_17725001 chr2L_17725001 RAL-301_125b 1109 chr2L 17747953 17748025 chr2L 17748080 17748152 19 126 13.5 15.5 14.5 1.2 199 chr2L 17747953 intron CadN - chr2L 17748052 intron CadN - chr2L 17748152 intron CadN - chr2L_19_17745001 chr2L_17745001 RAL-301_125b 1110 chr2L 17806671 17806684 chr2L 17806809 17806822 4 138 22.5 24.5 23.5 0.2 151 chr2L 17806671 intron CadN2 - chr2L 17806746 intron CadN2 - chr2L 17806822 intron CadN2 - chr2L_4_17805001 chr2L_17805001 RAL-301_125b 1111 chr2L 17806695 17806731 chr2L 17806808 17806869 6 134 20.0 24.5 22.2 0.3 174 chr2L 17806695 intron CadN2 - chr2L 17806782 intron CadN2 - chr2L 17806869 intron CadN2 - chr2L_6_17805001 chr2L_17805001 RAL-301_125b 1112 chr2L 17819877 17819945 chr2L 17825131 17825198 copia 21 5253 9.5 8.5 9.0 2.1 5321 chr2L 17819877 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825198 intron CadN2 - chr2L_21_17820001 chr2L_17820001 RAL-301_125b 1113 chr2L 17828191 17828264 chr2L 17828345 17828418 21 152 15.0 18.0 16.5 1.2 227 chr2L 17828191 intron CadN2 - chr2L 17828304 intron CadN2 - chr2L 17828418 intron CadN2 - chr2L_21_17825001 chr2L_17825001 RAL-301_125b 1114 chr2L 17876987 17877055 chr2L 17877189 17877257 13 201 23.5 20.5 22.0 0.6 270 chr2L 17876987 intergenic not near genes chr2L 17877122 intergenic not near genes chr2L 17877257 intergenic not near genes chr2L_13_17875001 chr2L_17875001 RAL-301_125b 1115 chr2L 17879977 17880023 chr2L 17880098 17880154 10 133 12.0 16.5 14.2 0.7 177 chr2L 17879977 intergenic not near genes chr2L 17880066 intergenic not near genes chr2L 17880154 intergenic not near genes chr2L_10_17880001 chr2L_17880001 RAL-301_125b 1116 chr2L 17911921 17911990 chr2L 17914149 17914178 pogo 19 2224 4.5 10.5 7.5 2.2 2257 chr2L 17911921 intergenic not near genes chr2L 17913050 intergenic not near genes chr2L 17914178 intergenic CG43271 - chr2L_19_17910001 chr2L_17910001 RAL-301_125b 1117 chr2L 17941841 17941872 chr2L 17941975 17942006 6 134 20.0 19.5 19.8 0.3 165 chr2L 17941841 intergenic not near genes chr2L 17941924 intergenic not near genes chr2L 17942006 intergenic not near genes chr2L_6_17940001 chr2L_17940001 RAL-301_125b 1118 chr2L 17944086 17944134 chr2L 17944214 17944262 8 128 29.5 26.0 27.8 0.3 176 chr2L 17944086 intergenic not near genes chr2L 17944174 intergenic not near genes chr2L 17944262 intergenic not near genes chr2L_8_17940001 chr2L_17940001 RAL-301_125b 1119 chr2L 17944379 17944448 chr2L 17944592 17944652 20 209 13.0 17.0 15.0 1.2 273 chr2L 17944379 intergenic not near genes chr2L 17944516 intergenic not near genes chr2L 17944652 intergenic not near genes chr2L_20_17940001 chr2L_17940001 RAL-301_125b 1120 chr2L 17951901 17951968 chr2L 17953418 17953481 hobo 32 1517 8.5 9.0 8.8 3.3 1580 chr2L 17951901 intergenic CR44398 -,CR44397 - chr2L 17952691 intergenic not near genes chr2L 17953481 intergenic not near genes chr2L_32_17950001 chr2L_17950001 RAL-301_125b 1121 chr2L 18051835 18051900 chr2L 18061032 18061097 roo 22 9196 6.0 13.0 9.5 2.1 9262 chr2L 18051835 intron rdo + chr2L 18056466 intron rdo + chr2L 18061097 intron rdo + chr2L_22_18055001 chr2L_18055001 RAL-301_125b 1122 chr2L 18095539 18095578 chr2L 18095670 18095709 8 130 25.5 24.5 25.0 0.3 170 chr2L 18095539 intergenic not near genes chr2L 18095624 intergenic not near genes chr2L 18095709 intergenic not near genes chr2L_8_18095001 chr2L_18095001 RAL-301_125b 1123 chr2L 18103018 18103056 chr2L 18103125 18103193 10 122 18.5 16.0 17.2 0.5 175 chr2L 18103018 intergenic not near genes chr2L 18103106 intergenic not near genes chr2L 18103193 intergenic not near genes chr2L_10_18100001 chr2L_18100001 RAL-301_125b 1124 chr2L 18111193 18111211 chr2L 18111334 18111352 5 141 32.5 32.0 32.2 0.2 159 chr2L 18111193 intergenic not near genes chr2L 18111272 intergenic not near genes chr2L 18111352 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-301_125b 1125 chr2L 18148785 18148845 chr2L 18148931 18148991 18 146 20.0 20.5 20.2 0.8 206 chr2L 18148785 intron Socs36E - chr2L 18148888 intron Socs36E - chr2L 18148991 intron Socs36E - chr2L_18_18145001 chr2L_18145001 RAL-301_125b 1126 chr2L 18159723 18159788 chr2L 18162210 18162275 11 2487 39.5 37.0 38.2 0.3 2552 chr2L 18159723 intergenic CG42750 -,CG7200 - chr2L 18160999 3` UTR CG42750 - chr2L 18162275 intron CG42750 - chr2L_11_18160001 chr2L_18160001 RAL-301_125b 1127 chr2L 18184953 18185025 chr2L 18185121 18185193 21 168 21.0 17.0 19.0 1.1 240 chr2L 18184953 intron,5` UTR CG42750 -,CG7180 - chr2L 18185073 intron CG42750 - chr2L 18185193 intron,3` UTR CG42750 -,CR44900 - chr2L_21_18185001 chr2L_18185001 RAL-301_125b 1128 chr2L 18210185 18210246 chr2L 18210328 18210391 11 144 16.0 21.5 18.8 0.6 206 chr2L 18210185 intron CG42750 - chr2L 18210288 intron CG42750 - chr2L 18210391 intron CG42750 - chr2L_11_18210001 chr2L_18210001 RAL-301_125b 1129 chr2L 18214426 18214472 chr2L 18214704 18214742 8 266 10.0 23.5 16.8 0.4 316 chr2L 18214426 intron CG42750 - chr2L 18214584 intron CG42750 - chr2L 18214742 intron CG42750 - chr2L_8_18210001 chr2L_18210001 RAL-301_125b 1130 chr2L 18218575 18218625 chr2L 18218713 18218763 8 138 15.0 13.0 14.0 0.5 188 chr2L 18218575 intron CG42750 - chr2L 18218669 intron CG42750 - chr2L 18218763 intron CG42750 - chr2L_8_18215001 chr2L_18215001 RAL-301_125b 1131 chr2L 18250523 18250529 chr2L 18250685 18250691 4 162 15.5 10.0 12.8 0.3 168 chr2L 18250523 intron CG42750 - chr2L 18250607 intron CG42750 - chr2L 18250691 intron CG42750 - chr2L_4_18250001 chr2L_18250001 RAL-301_125b 1132 chr2L 18254771 18254834 chr2L 18254921 18254984 11 150 38.5 39.0 38.8 0.3 213 chr2L 18254771 intron CG42750 - chr2L 18254878 intron CG42750 - chr2L 18254984 intron CG42750 - chr2L_11_18250001 chr2L_18250001 RAL-301_125b 1133 chr2L 18264019 18264087 chr2L 18264146 18264214 19 127 9.0 9.0 9.0 1.9 195 chr2L 18264019 intron CG42750 - chr2L 18264116 intron CG42750 - chr2L 18264214 intron CG42750 - chr2L_19_18260001 chr2L_18260001 RAL-301_125b 1134 chr2L 18274004 18274054 chr2L 18274140 18274190 10 136 19.0 19.0 19.0 0.5 186 chr2L 18274004 intron CG42750 - chr2L 18274097 intron CG42750 - chr2L 18274190 intron CG42750 - chr2L_10_18270001 chr2L_18270001 RAL-301_125b 1135 chr2L 18281726 18281795 chr2L 18281871 18281940 16 144 14.5 15.5 15.0 1.0 214 chr2L 18281726 intergenic not near genes chr2L 18281833 intergenic not near genes chr2L 18281940 intergenic not near genes chr2L_16_18280001 chr2L_18280001 RAL-301_125b 1136 chr2L 18291483 18291561 chr2L 18291631 18291723 8 152 17.0 11.0 14.0 0.5 240 chr2L 18291483 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291603 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291723 5` UTR CR44693 + chr2L_8_18290001 chr2L_18290001 RAL-301_125b 1137 chr2L 18299331 18299362 chr2L 18299588 18299619 13 254 21.5 14.5 18.0 0.7 288 chr2L 18299331 intergenic not near genes chr2L 18299475 intergenic not near genes chr2L 18299619 intergenic not near genes chr2L_13_18295001 chr2L_18295001 RAL-301_125b 1138 chr2L 18307855 18307903 chr2L 18307982 18308030 5 127 31.0 24.5 27.8 0.2 175 chr2L 18307855 intergenic CR43353 - chr2L 18307942 intergenic CR43353 - chr2L 18308030 intergenic CR43353 - chr2L_5_18305001 chr2L_18305001 RAL-301_125b 1139 chr2L 18359513 18359572 chr2L 18359661 18359720 8 147 23.5 28.0 25.8 0.3 207 chr2L 18359513 intron Fas3 + chr2L 18359616 intron Fas3 + chr2L 18359720 intron Fas3 + chr2L_8_18355001 chr2L_18355001 RAL-301_125b 1140 chr2L 18364219 18364291 chr2L 18364369 18364441 10 150 29.0 28.0 28.5 0.3 222 chr2L 18364219 intron Fas3 + chr2L 18364330 intron Fas3 + chr2L 18364441 intron Fas3 + chr2L_10_18360001 chr2L_18360001 RAL-301_125b 1141 chr2L 18407985 18408044 chr2L 18412818 18412878 Doc 15 4834 15.0 3.0 9.0 1.5 4893 chr2L 18407985 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412878 intergenic not near genes chr2L_15_18410001 chr2L_18410001 RAL-301_125b 1142 chr2L 18415149 18415159 chr2L 18416837 18416909 10 1699 32.0 37.5 34.8 0.3 1760 chr2L 18415149 intergenic not near genes chr2L 18416029 intergenic not near genes chr2L 18416909 intergenic not near genes chr2L_10_18415001 chr2L_18415001 RAL-301_125b 1143 chr2L 18443817 18443878 chr2L 18443947 18444008 9 130 17.5 13.0 15.2 0.6 191 chr2L 18443817 intergenic not near genes chr2L 18443912 intergenic not near genes chr2L 18444008 intergenic ncm - chr2L_9_18440001 chr2L_18440001 RAL-301_125b 1144 chr2L 18444764 18444779 chr2L 18444916 18444927 7 153 24.0 34.5 29.2 0.2 163 chr2L 18444764 exon ncm - chr2L 18444846 exon ncm - chr2L 18444927 exon ncm - chr2L_7_18440001 chr2L_18440001 RAL-301_125b 1145 chr2L 18462312 18462476 chr2L 18462473 18462604 7 158 11.0 13.0 12.0 0.5 292 chr2L 18462312 intron let-7-C + chr2L 18462458 intron let-7-C + chr2L 18462604 intron let-7-C + chr2L_7_18460001 chr2L_18460001 RAL-301_125b 1146 chr2L 18538551 18538582 chr2L 18538683 18538711 5 131 34.0 32.0 33.0 0.1 160 chr2L 18538551 intron Pde11 - chr2L 18538631 intron Pde11 - chr2L 18538711 intron Pde11 - chr2L_5_18535001 chr2L_18535001 RAL-301_125b 1147 chr2L 18541690 18541755 chr2L 18541815 18541881 27 125 19.5 15.5 17.5 1.5 191 chr2L 18541690 intron Pde11 - chr2L 18541786 intron Pde11 - chr2L 18541881 exon Pde11 - chr2L_27_18540001 chr2L_18540001 RAL-301_125b 1148 chr2L 18552001 18552017 chr2L 18552131 18552147 11 130 21.5 17.0 19.2 0.5 146 chr2L 18552001 intron Pde11 - chr2L 18552074 intron Pde11 - chr2L 18552147 intron Pde11 - chr2L_11_18550001 chr2L_18550001 RAL-301_125b 1149 chr2L 18561510 18561580 chr2L 18561652 18561711 39 148 4.5 10.0 7.2 4.8 201 chr2L 18561510 intron Pde11 - chr2L 18561610 intron Pde11 - chr2L 18561711 intron Pde11 - chr2L_39_18560001 chr2L_18560001 RAL-301_125b 1150 chr2L 18568268 18568319 chr2L 18568398 18568449 18 129 20.5 20.5 20.5 0.8 181 chr2L 18568268 intron Pde11 - chr2L 18568358 intron Pde11 - chr2L 18568449 intron Pde11 - chr2L_18_18565001 chr2L_18565001 RAL-301_125b 1151 chr2L 18575579 18575591 chr2L 18575726 18575738 10 147 16.0 0.0 8.0 1.1 159 chr2L 18575579 intron Pde11 - chr2L 18575658 intron Pde11 - chr2L 18575738 intron Pde11 - chr2L_10_18575001 chr2L_18575001 RAL-301_125b 1152 chr2L 18578695 18578752 chr2L 18578831 18578892 10 137 24.0 27.0 25.5 0.4 197 chr2L 18578695 intron Pde11 - chr2L 18578794 intron Pde11 - chr2L 18578892 intron Pde11 - chr2L_10_18575001 chr2L_18575001 RAL-301_125b 1153 chr2L 18777383 18777403 chr2L 18777517 18777537 5 134 18.0 23.5 20.8 0.2 154 chr2L 18777383 intron ham - chr2L 18777460 intron ham - chr2L 18777537 intron ham - chr2L_5_18775001 chr2L_18775001 RAL-301_125b 1154 chr2L 18800086 18800143 chr2L 18800211 18800216 9 111 27.0 32.0 29.5 0.3 130 chr2L 18800086 intergenic not near genes chr2L 18800151 intergenic not near genes chr2L 18800216 intergenic not near genes chr2L_9_18800001 chr2L_18800001 RAL-301_125b 1155 chr2L 18816696 18816761 chr2L 18816878 18816943 28 182 14.0 13.0 13.5 1.9 247 chr2L 18816696 intergenic not near genes chr2L 18816820 intergenic not near genes chr2L 18816943 intergenic not near genes chr2L_28_18815001 chr2L_18815001 RAL-301_125b 1156 chr2L 18876816 18876875 chr2L 18876944 18877001 19 128 22.5 21.5 22.0 0.8 185 chr2L 18876816 intron tup - chr2L 18876908 intron tup - chr2L 18877001 intron tup - chr2L_19_18875001 chr2L_18875001 RAL-301_125b 1157 chr2L 18898351 18898373 chr2L 18898483 18898505 7 132 11.5 0.0 5.8 1.0 154 chr2L 18898351 intergenic not near genes chr2L 18898428 intergenic not near genes chr2L 18898505 intergenic not near genes chr2L_7_18895001 chr2L_18895001 RAL-301_125b 1158 chr2L 18898375 18898399 chr2L 18898482 18898531 12 128 7.5 0.0 3.8 2.5 156 chr2L 18898375 intergenic not near genes chr2L 18898453 intergenic not near genes chr2L 18898531 intergenic not near genes chr2L_12_18895001 chr2L_18895001 RAL-301_125b 1159 chr2L 18902573 18902646 chr2L 18902904 18902977 22 331 10.0 5.0 7.5 2.6 404 chr2L 18902573 intergenic not near genes chr2L 18902775 intergenic not near genes chr2L 18902977 intergenic not near genes chr2L_22_18900001 chr2L_18900001 RAL-301_125b 1160 chr2L 18926536 18926589 chr2L 18926692 18926746 12 157 18.5 17.0 17.8 0.6 210 chr2L 18926536 intron ssp3 - chr2L 18926641 intron ssp3 - chr2L 18926746 intron ssp3 - chr2L_12_18925001 chr2L_18925001 RAL-301_125b 1161 chr2L 18943109 18943184 chr2L 18943244 18943304 18 133 22.5 21.5 22.0 0.8 195 chr2L 18943109 intron ssp3 - chr2L 18943206 intron ssp3 - chr2L 18943304 exon ssp3 - chr2L_18_18940001 chr2L_18940001 RAL-301_125b 1162 chr2L 18962181 18962253 chr2L 18962325 18962398 7 145 9.0 15.0 12.0 0.5 217 chr2L 18962181 intron Nak - chr2L 18962290 intron Nak - chr2L 18962398 intron Nak - chr2L_7_18960001 chr2L_18960001 RAL-301_125b 1163 chr2L 18981704 18981778 chr2L 18981831 18981905 20 125 15.5 19.0 17.2 1.1 201 chr2L 18981704 intron Swip-1 - chr2L 18981804 intron Swip-1 - chr2L 18981905 intron Swip-1 - chr2L_20_18980001 chr2L_18980001 RAL-301_125b 1164 chr2L 18990273 18990338 chr2L 18990434 18990499 27 161 24.0 22.5 23.2 1.1 226 chr2L 18990273 intergenic CG15170 - chr2L 18990386 intergenic CG15170 - chr2L 18990499 intergenic CG15170 - chr2L_27_18990001 chr2L_18990001 RAL-301_125b 1165 chr2L 19106329 19106390 chr2L 19106459 19106514 14 128 12.5 10.5 11.5 1.1 185 chr2L 19106329 intron Lim3 - chr2L 19106422 intron Lim3 - chr2L 19106514 intron Lim3 - chr2L_14_19105001 chr2L_19105001 RAL-301_125b 1166 chr2L 19120999 19121072 chr2L 19121127 19121201 17 128 19.0 15.5 17.2 0.9 202 chr2L 19120999 intergenic l(2)37Cc - chr2L 19121100 intergenic l(2)37Cc - chr2L 19121201 intergenic l(2)37Cc - chr2L_17_19120001 chr2L_19120001 RAL-301_125b 1167 chr2L 19121503 19121564 chr2L 19121634 19121672 13 122 20.0 24.0 22.0 0.6 169 chr2L 19121503 3` UTR l(2)37Cc - chr2L 19121588 3` UTR l(2)37Cc - chr2L 19121672 3` UTR l(2)37Cc - chr2L_13_19120001 chr2L_19120001 RAL-301_125b 1168 chr2L 19145143 19145170 chr2L 19145273 19145273 6 129 25.0 8.0 16.5 0.3 130 chr2L 19145143 intron brat + chr2L 19145208 intron brat + chr2L 19145273 intron brat + chr2L_6_19145001 chr2L_19145001 RAL-301_125b 1169 chr2L 19147325 19147389 chr2L 19154410 19154453 297 22 7084 12.0 10.0 11.0 1.8 7128 chr2L 19147325 intron brat + chr2L 19150889 intron brat + chr2L 19154453 intron brat + chr2L_22_19150001 chr2L_19150001 RAL-301_125b 1170 chr2L 19163082 19163154 chr2L 19163217 19163289 20 134 17.0 15.5 16.2 1.2 207 chr2L 19163082 intron brat + chr2L 19163186 intron brat + chr2L 19163289 intron brat + chr2L_20_19160001 chr2L_19160001 RAL-301_125b 1171 chr2L 19189943 19189987 chr2L 19190147 19190191 10 204 19.5 23.0 21.2 0.5 248 chr2L 19189943 intergenic pigeon +,drl + chr2L 19190067 intergenic pigeon +,drl + chr2L 19190191 intergenic drl +,pigeon + chr2L_10_19190001 chr2L_19190001 RAL-301_125b 1172 chr2L 19199626 19199695 chr2L 19199751 19199822 16 119 22.0 23.0 22.5 0.7 196 chr2L 19199626 intron drl + chr2L 19199724 intron drl + chr2L 19199822 intron drl + chr2L_16_19195001 chr2L_19195001 RAL-301_125b 1173 chr2L 19237265 19237331 chr2L 19237415 19237481 9 146 11.0 11.5 11.2 0.7 216 chr2L 19237265 intergenic not near genes chr2L 19237373 intergenic not near genes chr2L 19237481 intergenic not near genes chr2L_9_19235001 chr2L_19235001 RAL-301_125b 1174 chr2L 19246795 19246827 chr2L 19246923 19246955 10 128 29.5 27.5 28.5 0.3 160 chr2L 19246795 intergenic not near genes chr2L 19246875 intergenic not near genes chr2L 19246955 intergenic not near genes chr2L_10_19245001 chr2L_19245001 RAL-301_125b 1175 chr2L 19254901 19254958 chr2L 19255044 19255106 11 148 31.0 23.0 27.0 0.4 205 chr2L 19254901 intergenic not near genes chr2L 19255004 intergenic not near genes chr2L 19255106 intergenic not near genes chr2L_11_19255001 chr2L_19255001 RAL-301_125b 1176 chr2L 19266176 19266193 chr2L 19266354 19266410 4 207 25.0 20.0 22.5 0.2 234 chr2L 19266176 intergenic not near genes chr2L 19266293 intergenic not near genes chr2L 19266410 intergenic not near genes chr2L_4_19265001 chr2L_19265001 RAL-301_125b 1177 chr2L 19270853 19270869 chr2L 19270993 19271009 6 140 28.5 34.5 31.5 0.2 156 chr2L 19270853 intron CR44190 - chr2L 19270931 intron CR44190 - chr2L 19271009 intron CR44190 - chr2L_6_19270001 chr2L_19270001 RAL-301_125b 1178 chr2L 19309053 19309127 chr2L 19309196 19309241 22 138 10.5 15.0 12.8 1.6 188 chr2L 19309053 intergenic not near genes chr2L 19309147 intergenic not near genes chr2L 19309241 intergenic not near genes chr2L_22_19305001 chr2L_19305001 RAL-301_125b 1179 chr2L 19331622 19331636 chr2L 19331751 19331765 4 129 26.0 16.5 21.2 0.2 143 chr2L 19331622 intergenic not near genes chr2L 19331694 intergenic not near genes chr2L 19331765 intergenic not near genes chr2L_4_19330001 chr2L_19330001 RAL-301_125b 1180 chr2L 19331637 19331694 chr2L 19331746 19331820 20 114 14.0 16.5 15.2 1.2 183 chr2L 19331637 intergenic not near genes chr2L 19331728 intergenic not near genes chr2L 19331820 intergenic not near genes chr2L_20_19330001 chr2L_19330001 RAL-301_125b 1181 chr2L 19344991 19345033 chr2L 19357250 19357292 blood 16 12258 11.0 13.0 12.0 1.2 12301 chr2L 19344991 intron dnt - chr2L 19351142 intron dnt - chr2L 19357292 intron dnt - chr2L_16_19350001 chr2L_19350001 RAL-301_125b 1182 chr2L 19357508 19357528 chr2L 19357648 19357668 7 139 15.0 11.5 13.2 0.5 160 chr2L 19357508 intron dnt - chr2L 19357588 intron dnt - chr2L 19357668 intron dnt - chr2L_7_19355001 chr2L_19355001 RAL-301_125b 1183 chr2L 19357529 19357566 chr2L 19357639 19357704 12 136 9.0 9.0 9.0 1.2 175 chr2L 19357529 intron dnt - chr2L 19357616 intron dnt - chr2L 19357704 intron dnt - chr2L_12_19355001 chr2L_19355001 RAL-301_125b 1184 chr2L 19374887 19374939 chr2L 19375062 19375114 12 175 15.5 25.5 20.5 0.6 227 chr2L 19374887 intergenic not near genes chr2L 19375000 intergenic not near genes chr2L 19375114 intergenic not near genes chr2L_12_19375001 chr2L_19375001 RAL-301_125b 1185 chr2L 19376343 19376361 chr2L 19376751 19376795 10 431 14.5 16.0 15.2 0.6 452 chr2L 19376343 intergenic not near genes chr2L 19376569 intergenic not near genes chr2L 19376795 intergenic not near genes chr2L_10_19375001 chr2L_19375001 RAL-301_125b 1186 chr2L 19378329 19378343 chr2L 19378435 19378476 5 128 24.5 23.0 23.8 0.2 147 chr2L 19378329 intergenic not near genes chr2L 19378402 intergenic not near genes chr2L 19378476 intergenic not near genes chr2L_5_19375001 chr2L_19375001 RAL-301_125b 1187 chr2L 19380479 19380498 chr2L 19380609 19380611 5 125 36.0 39.0 37.5 0.1 132 chr2L 19380479 intergenic CG17350 + chr2L 19380545 intergenic CG17350 + chr2L 19380611 intergenic CG17350 + chr2L_5_19380001 chr2L_19380001 RAL-301_125b 1188 chr2L 19382575 19382624 chr2L 19382702 19382716 8 110 24.0 18.5 21.2 0.4 141 chr2L 19382575 exon CG17350 + chr2L 19382646 exon CG17350 + chr2L 19382716 exon CG17350 + chr2L_8_19380001 chr2L_19380001 RAL-301_125b 1189 chr2L 19405573 19405640 chr2L 19405713 19405780 34 140 8.0 4.0 6.0 4.9 207 chr2L 19405573 intron Pax - chr2L 19405676 intron Pax - chr2L 19405780 intron Pax - chr2L_34_19405001 chr2L_19405001 RAL-301_125b 1190 chr2L 19407666 19407737 chr2L 19407913 19407983 24 247 18.0 21.0 19.5 1.2 317 chr2L 19407666 intron Pax - chr2L 19407824 intron Pax - chr2L 19407983 intron Pax - chr2L_24_19405001 chr2L_19405001 RAL-301_125b 1191 chr2L 19415518 19415575 chr2L 19415756 19415799 21 237 18.5 15.5 17.0 1.2 281 chr2L 19415518 intron Pax - chr2L 19415658 intron Pax - chr2L 19415799 intron Pax - chr2L_21_19415001 chr2L_19415001 RAL-301_125b 1192 chr2L 19437474 19437531 chr2L 19437616 19437673 20 142 7.5 9.0 8.2 2.2 199 chr2L 19437474 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437673 exon CG10237 - chr2L_20_19435001 chr2L_19435001 RAL-301_125b 1193 chr2L 19441021 19441085 chr2L 19441148 19441212 22 127 16.5 23.0 19.8 1.1 191 chr2L 19441021 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441212 5` UTR CG10237 - chr2L_22_19440001 chr2L_19440001 RAL-301_125b 1194 chr2L 19441406 19441475 chr2L 19446302 19446371 12 4901 35.5 68.5 52.0 0.2 4965 chr2L 19441406 intron CG10237 - chr2L 19443888 intron,intron RanGAP +,Hs2st - chr2L 19446371 exon RanGAP + chr2L_12_19440001 chr2L_19440001 RAL-301_125b 1195 chr2L 19469123 19469196 chr2L 19469258 19469328 21 135 14.5 19.0 16.8 1.2 205 chr2L 19469123 intergenic CR45722 + chr2L 19469226 5` UTR CR45722 + chr2L 19469328 5` UTR CR45722 + chr2L_21_19465001 chr2L_19465001 RAL-301_125b 1196 chr2L 19541582 19541630 chr2L 19541717 19541765 10 135 12.5 12.5 12.5 0.7 183 chr2L 19541582 intergenic CG13081 + chr2L 19541674 intergenic CG13081 + chr2L 19541765 intergenic CG13081 + chr2L_10_19540001 chr2L_19540001 RAL-301_125b 1197 chr2L 19544553 19544570 chr2L 19544680 19544685 4 123 20.0 13.0 16.5 0.2 132 chr2L 19544553 exon ref(2)P + chr2L 19544619 exon ref(2)P + chr2L 19544685 exon ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-301_125b 1198 chr2L 19544572 19544621 chr2L 19544676 19544702 25 115 11.5 11.5 11.5 2.0 130 chr2L 19544572 exon ref(2)P + chr2L 19544637 exon ref(2)P + chr2L 19544702 exon ref(2)P + chr2L_25_19540001 chr2L_19540001 RAL-301_125b 1199 chr2L 19557778 19557825 chr2L 19557920 19557957 13 141 17.0 13.0 15.0 0.8 179 chr2L 19557778 intergenic Tep5 + chr2L 19557868 intergenic Tep5 + chr2L 19557957 intergenic Tep5 + chr2L_13_19555001 chr2L_19555001 RAL-301_125b 1200 chr2L 19558481 19558541 chr2L 19558627 19558694 18 153 16.0 19.0 17.5 1.0 213 chr2L 19558481 intron Tep5 + chr2L 19558588 intron Tep5 + chr2L 19558694 intron Tep5 + chr2L_18_19555001 chr2L_19555001 RAL-301_125b 1201 chr2L 19559955 19560033 chr2L 19560258 19560335 18 303 13.5 19.5 16.5 1.0 380 chr2L 19559955 exon Tep5 + chr2L 19560145 exon Tep5 + chr2L 19560335 intron Tep5 + chr2L_18_19560001 chr2L_19560001 RAL-301_125b 1202 chr2L 19560799 19560862 chr2L 19560929 19561007 14 136 21.5 18.5 20.0 0.7 208 chr2L 19560799 exon Tep5 + chr2L 19560903 exon Tep5 + chr2L 19561007 exon Tep5 + chr2L_14_19560001 chr2L_19560001 RAL-301_125b 1203 chr2L 19561296 19561358 chr2L 19561489 19561549 11 191 12.0 14.0 13.0 0.8 253 chr2L 19561296 exon Tep5 + chr2L 19561422 exon Tep5 + chr2L 19561549 exon Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-301_125b 1204 chr2L 19587755 19587809 chr2L 19587890 19587956 18 144 19.5 19.0 19.2 0.9 201 chr2L 19587755 intron Lar + chr2L 19587856 intron Lar + chr2L 19587956 intron Lar + chr2L_18_19585001 chr2L_19585001 RAL-301_125b 1205 chr2L 19601526 19601599 chr2L 19601652 19601726 16 127 20.0 19.5 19.8 0.8 200 chr2L 19601526 intron,intron Lar +,CR44978 - chr2L 19601626 intron,intron Lar +,CR44978 - chr2L 19601726 intron,intron Lar +,CR44978 - chr2L_16_19600001 chr2L_19600001 RAL-301_125b 1206 chr2L 19608558 19608611 chr2L 19608699 19608752 23 140 7.5 8.0 7.8 2.6 194 chr2L 19608558 intron Lar + chr2L 19608655 intron Lar + chr2L 19608752 intron Lar + chr2L_23_19605001 chr2L_19605001 RAL-301_125b 1207 chr2L 19609594 19609665 chr2L 19609738 19609809 30 142 20.5 16.0 18.2 1.6 215 chr2L 19609594 intron Lar + chr2L 19609702 intron Lar + chr2L 19609809 intron Lar + chr2L_30_19605001 chr2L_19605001 RAL-301_125b 1208 chr2L 19620050 19620101 chr2L 19621089 19621137 jockey 28 1036 18.0 6.0 12.0 2.2 1087 chr2L 19620050 intron Lar + chr2L 19620594 intron Lar + chr2L 19621137 intron Lar + chr2L_28_19620001 chr2L_19620001 RAL-301_125b 1209 chr2L 19638501 19638550 chr2L 19638638 19638688 6 138 31.0 32.5 31.8 0.2 187 chr2L 19638501 intron Lar + chr2L 19638594 intron Lar + chr2L 19638688 intron Lar + chr2L_6_19635001 chr2L_19635001 RAL-301_125b 1210 chr2L 19652522 19652595 chr2L 19674008 19674076 opus 30 21486 7.0 11.5 9.2 2.9 21554 chr2L 19652522 intron Lar + chr2L 19663299 intron Lar + chr2L 19674076 intron Lar + chr2L_30_19660001 chr2L_19660001 RAL-301_125b 1211 chr2L 19681395 19681469 chr2L 19681517 19681551 13 123 23.0 23.0 23.0 0.5 156 chr2L 19681395 intron Lar + chr2L 19681473 intron Lar + chr2L 19681551 intron Lar + chr2L_13_19680001 chr2L_19680001 RAL-301_125b 1212 chr2L 19681880 19681940 chr2L 19682222 19682282 13 336 20.5 17.5 19.0 0.7 402 chr2L 19681880 intron Lar + chr2L 19682081 intron Lar + chr2L 19682282 intron Lar + chr2L_13_19680001 chr2L_19680001 RAL-301_125b 1213 chr2L 19703498 19703561 chr2L 19712684 19712716 roo 27 9184 9.0 8.0 8.5 2.8 9218 chr2L 19703498 intron Lar + chr2L 19708107 intron Lar + chr2L 19712716 intron Lar + chr2L_27_19705001 chr2L_19705001 RAL-301_125b 1214 chr2L 19718485 19718519 chr2L 19718630 19718665 18 140 4.0 19.5 11.8 1.4 180 chr2L 19718485 intron Lar + chr2L 19718575 intron Lar + chr2L 19718665 intron Lar + chr2L_18_19715001 chr2L_19715001 RAL-301_125b 1215 chr2L 19721044 19721083 chr2L 19721409 19721433 5 362 31.0 33.0 32.0 0.2 389 chr2L 19721044 intron Lar + chr2L 19721238 intron Lar + chr2L 19721433 intron Lar + chr2L_5_19720001 chr2L_19720001 RAL-301_125b 1216 chr2L 19737308 19737389 chr2L 19740827 19740877 1360 20 3508 8.5 6.0 7.2 2.4 3569 chr2L 19737308 intergenic Nf-YB + chr2L 19739092 intergenic not near genes chr2L 19740877 intergenic not near genes chr2L_20_19735001 chr2L_19735001 RAL-301_125b 1217 chr2L 19762762 19762830 chr2L 19763054 19763122 pogo 32 290 13.0 8.0 10.5 2.8 360 chr2L 19762762 exon fbp - chr2L 19762942 intron fbp - chr2L 19763122 intron fbp - chr2L_32_19760001 chr2L_19760001 RAL-301_125b 1218 chr2L 19765069 19765140 chr2L 19765254 19765325 5 185 16.0 16.5 16.2 0.3 256 chr2L 19765069 intergenic not near genes chr2L 19765197 intergenic not near genes chr2L 19765325 intergenic bsh - chr2L_5_19765001 chr2L_19765001 RAL-301_125b 1219 chr2L 19773122 19773191 chr2L 19773259 19773328 22 137 10.5 7.5 9.0 2.2 206 chr2L 19773122 intergenic not near genes chr2L 19773225 intergenic not near genes chr2L 19773328 intergenic not near genes chr2L_22_19770001 chr2L_19770001 RAL-301_125b 1220 chr2L 19776619 19776655 chr2L 19776749 19776785 7 130 25.5 21.0 23.2 0.3 166 chr2L 19776619 3` UTR CdGAPr - chr2L 19776702 3` UTR CdGAPr - chr2L 19776785 3` UTR CdGAPr - chr2L_7_19775001 chr2L_19775001 RAL-301_125b 1221 chr2L 19823245 19823292 chr2L 19823384 19823431 9 139 30.0 24.0 27.0 0.3 186 chr2L 19823245 intron sick + chr2L 19823338 intron sick + chr2L 19823431 intron sick + chr2L_9_19820001 chr2L_19820001 RAL-301_125b 1222 chr2L 19824374 19824429 chr2L 19824507 19824562 16 133 20.5 25.5 23.0 0.7 188 chr2L 19824374 intron sick + chr2L 19824468 intron sick + chr2L 19824562 intron sick + chr2L_16_19820001 chr2L_19820001 RAL-301_125b 1223 chr2L 19833099 19833125 chr2L 19833227 19833253 5 128 11.0 0.0 5.5 0.8 154 chr2L 19833099 intron sick + chr2L 19833176 intron sick + chr2L 19833253 intron sick + chr2L_5_19830001 chr2L_19830001 RAL-301_125b 1224 chr2L 19837243 19837309 chr2L 19837373 19837438 11 130 20.5 22.0 21.2 0.5 195 chr2L 19837243 intron sick + chr2L 19837340 intron sick + chr2L 19837438 intron sick + chr2L_11_19835001 chr2L_19835001 RAL-301_125b 1225 chr2L 19846236 19846272 chr2L 19846367 19846403 14 130 13.5 23.5 18.5 0.7 167 chr2L 19846236 intron sick + chr2L 19846320 intron sick + chr2L 19846403 intron sick + chr2L_14_19845001 chr2L_19845001 RAL-301_125b 1226 chr2L 19863141 19863186 chr2L 19867784 19867844 7 4645 54.5 39.5 47.0 0.1 4703 chr2L 19863141 intron sick + chr2L 19865492 intron sick + chr2L 19867844 intron sick + chr2L_7_19865001 chr2L_19865001 RAL-301_125b 1227 chr2L 19911247 19911314 chr2L 19911385 19911452 30 137 6.0 6.0 6.0 4.3 205 chr2L 19911247 intron,3` UTR sick +,CR43097 - chr2L 19911350 intron,3` UTR sick +,CR43097 - chr2L 19911452 intron,3` UTR sick +,CR43097 - chr2L_30_19910001 chr2L_19910001 RAL-301_125b 1228 chr2L 19912767 19912772 chr2L 19912935 19912940 4 168 33.0 38.5 35.8 0.1 173 chr2L 19912767 intron sick + chr2L 19912854 intron sick + chr2L 19912940 intron,3` UTR sick +,Victoria - chr2L_4_19910001 chr2L_19910001 RAL-301_125b 1229 chr2L 19947641 19947733 chr2L 19947768 19947869 9 133 1.5 2.5 2.0 3.0 228 chr2L 19947641 intron sick + chr2L 19947755 intron sick + chr2L 19947869 intron sick + chr2L_9_19945001 chr2L_19945001 RAL-301_125b 1230 chr2L 19988070 19988141 chr2L 19988211 19988281 6 140 27.5 33.5 30.5 0.2 211 chr2L 19988070 intron CG43861 - chr2L 19988176 intron CG43861 - chr2L 19988281 intron CG43861 - chr2L_6_19985001 chr2L_19985001 RAL-301_125b 1231 chr2L 20005836 20005896 chr2L 20010962 20011022 flea 26 5126 5.5 8.5 7.0 3.2 5186 chr2L 20005836 intron CG43861 - chr2L 20008429 intron CG43861 - chr2L 20011022 intron CG43861 - chr2L_26_20005001 chr2L_20005001 RAL-301_125b 1232 chr2L 20036486 20036545 chr2L 20036620 20036679 11 133 19.0 19.0 19.0 0.6 193 chr2L 20036486 intron sNPF + chr2L 20036582 intron sNPF + chr2L 20036679 intron sNPF + chr2L_11_20035001 chr2L_20035001 RAL-301_125b 1233 chr2L 20057003 20057074 chr2L 20057130 20057201 7 124 10.0 13.0 11.5 0.6 198 chr2L 20057003 intergenic not near genes chr2L 20057102 intergenic not near genes chr2L 20057201 intergenic not near genes chr2L_7_20055001 chr2L_20055001 RAL-301_125b 1234 chr2L 20115537 20115584 chr2L 20115677 20115722 5 138 28.0 27.0 27.5 0.2 185 chr2L 20115537 intergenic not near genes chr2L 20115630 intergenic not near genes chr2L 20115722 intergenic not near genes chr2L_5_20115001 chr2L_20115001 RAL-301_125b 1235 chr2L 20124287 20124352 chr2L 20124415 20124480 13 128 30.0 27.0 28.5 0.4 193 chr2L 20124287 intergenic not near genes chr2L 20124384 intergenic not near genes chr2L 20124480 intergenic not near genes chr2L_13_20120001 chr2L_20120001 RAL-301_125b 1236 chr2L 20250882 20250899 chr2L 20251009 20251023 7 127 29.5 23.5 26.5 0.3 141 chr2L 20250882 intergenic not near genes chr2L 20250952 intergenic not near genes chr2L 20251023 intergenic not near genes chr2L_7_20250001 chr2L_20250001 RAL-301_125b 1237 chr2L 20250901 20250950 chr2L 20251003 20251043 20 120 23.0 22.0 22.5 0.9 142 chr2L 20250901 intergenic not near genes chr2L 20250972 intergenic not near genes chr2L 20251043 intergenic not near genes chr2L_20_20250001 chr2L_20250001 RAL-301_125b 1238 chr2L 20272075 20272141 chr2L 20282836 20282902 copia 34 10760 8.0 13.0 10.5 3.0 10827 chr2L 20272075 intergenic not near genes chr2L 20277488 intergenic not near genes chr2L 20282902 intergenic not near genes chr2L_34_20275001 chr2L_20275001 RAL-301_125b 1239 chr2L 20294255 20294318 chr2L 20294394 20294450 18 138 15.5 20.0 17.8 1.0 195 chr2L 20294255 intergenic CG12617 + chr2L 20294352 intergenic CG12617 + chr2L 20294450 intergenic CG12617 + chr2L_18_20290001 chr2L_20290001 RAL-301_125b 1240 chr2L 20303161 20303184 chr2L 20310679 20310702 blood 12 7518 2.0 16.0 9.0 1.2 7541 chr2L 20303161 intergenic not near genes chr2L 20306932 intergenic not near genes chr2L 20310702 intergenic not near genes chr2L_12_20305001 chr2L_20305001 RAL-301_125b 1241 chr2L 20319992 20320066 chr2L 20320146 20320235 26 166 9.0 0.0 4.5 4.7 243 chr2L 20319992 intron spir + chr2L 20320114 intron spir + chr2L 20320235 intron spir + chr2L_26_20320001 chr2L_20320001 RAL-301_125b 1242 chr2L 20370843 20370900 chr2L 20371071 20371150 21 244 13.5 18.5 16.0 1.2 307 chr2L 20370843 intergenic not near genes chr2L 20370996 intergenic not near genes chr2L 20371150 intergenic not near genes chr2L_21_20370001 chr2L_20370001 RAL-301_125b 1243 chr2L 20372168 20372230 chr2L 20372468 20372521 pogo 20 296 11.5 10.0 10.8 1.7 353 chr2L 20372168 intergenic Ugt37a1 - chr2L 20372344 intergenic Ugt37a1 - chr2L 20372521 exon Ugt37a1 - chr2L_20_20370001 chr2L_20370001 RAL-301_125b 1244 chr2L 20372825 20372879 chr2L 20372930 20372993 16 120 15.0 18.0 16.5 0.9 168 chr2L 20372825 exon Ugt37a1 - chr2L 20372909 exon Ugt37a1 - chr2L 20372993 exon Ugt37a1 - chr2L_16_20370001 chr2L_20370001 RAL-301_125b 1245 chr2L 20383239 20383305 chr2L 20383358 20383433 7 129 20.5 16.5 18.5 0.4 194 chr2L 20383239 intergenic not near genes chr2L 20383336 intergenic not near genes chr2L 20383433 intergenic not near genes chr2L_7_20380001 chr2L_20380001 RAL-301_125b 1246 chr2L 20424044 20424060 chr2L 20424153 20424193 6 126 31.5 33.5 32.5 0.2 149 chr2L 20424044 intron CG15130 - chr2L 20424118 intron CG15130 - chr2L 20424193 intron CG15130 - chr2L_6_20420001 chr2L_20420001 RAL-301_125b 1247 chr2L 20468339 20468397 chr2L 20468494 20468552 INE-1 7 155 20.0 21.0 20.5 0.3 213 chr2L 20468339 intron CR44980 - chr2L 20468446 intron CR44980 - chr2L 20468552 intron CR44980 - chr2L_7_20465001 chr2L_20465001 RAL-301_125b 1248 chr2L 20498646 20498702 chr2L 20498795 20498851 21 148 11.5 15.0 13.2 1.5 205 chr2L 20498646 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498851 intergenic not near genes chr2L_21_20495001 chr2L_20495001 RAL-301_125b 1249 chr2L 20545992 20546069 chr2L 20546119 20546186 12 126 33.0 34.5 33.8 0.3 194 chr2L 20545992 intergenic not near genes chr2L 20546089 intergenic not near genes chr2L 20546186 intergenic not near genes chr2L_12_20545001 chr2L_20545001 RAL-301_125b 1250 chr2L 20553142 20553193 chr2L 20553268 20553319 7 125 26.5 29.0 27.8 0.2 177 chr2L 20553142 intergenic not near genes chr2L 20553230 intergenic not near genes chr2L 20553319 intergenic not near genes chr2L_7_20550001 chr2L_20550001 RAL-301_125b 1251 chr2L 20558652 20558693 chr2L 20558803 20558844 8 151 31.0 32.5 31.8 0.2 192 chr2L 20558652 intergenic not near genes chr2L 20558748 intergenic not near genes chr2L 20558844 intergenic not near genes chr2L_8_20555001 chr2L_20555001 RAL-301_125b 1252 chr2L 20560828 20560882 chr2L 20560965 20561019 16 137 14.5 13.0 13.8 1.1 191 chr2L 20560828 intergenic not near genes chr2L 20560924 intergenic not near genes chr2L 20561019 intergenic not near genes chr2L_16_20560001 chr2L_20560001 RAL-301_125b 1253 chr2L 20568610 20568685 chr2L 20569050 20569125 X-element 33 438 9.5 5.0 7.2 4.0 515 chr2L 20568610 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569125 intron CR45347 + chr2L_33_20565001 chr2L_20565001 RAL-301_125b 1254 chr2L 20576176 20576237 chr2L 20583694 20583742 blood 17 7514 8.5 6.0 7.2 2.1 7566 chr2L 20576176 intergenic CR45347 + chr2L 20579959 intergenic not near genes chr2L 20583742 3` UTR CR44909 - chr2L_17_20575001 chr2L_20575001 RAL-301_125b 1255 chr2L 20588511 20588571 chr2L 20588648 20588692 13 132 17.5 17.5 17.5 0.7 181 chr2L 20588511 intron CR44909 - chr2L 20588602 intron CR44909 - chr2L 20588692 intron CR44909 - chr2L_13_20585001 chr2L_20585001 RAL-301_125b 1256 chr2L 20597039 20597118 chr2L 20597165 20597181 18 122 7.5 7.5 7.5 2.1 142 chr2L 20597039 intron CR44909 - chr2L 20597110 intron CR44909 - chr2L 20597181 intron CR44909 - chr2L_18_20595001 chr2L_20595001 RAL-301_125b 1257 chr2L 20600618 20600685 chr2L 20600867 20600934 20 247 16.5 17.5 17.0 1.1 316 chr2L 20600618 intron CR44909 - chr2L 20600776 intron CR44909 - chr2L 20600934 intron CR44909 - chr2L_20_20600001 chr2L_20600001 RAL-301_125b 1258 chr2L 20601754 20601815 chr2L 20601870 20601943 10 127 25.5 21.5 23.5 0.4 189 chr2L 20601754 intron CR44909 - chr2L 20601848 intron CR44909 - chr2L 20601943 intron CR44909 - chr2L_10_20600001 chr2L_20600001 RAL-301_125b 1259 chr2L 20602676 20602739 chr2L 20602814 20602877 8 138 13.0 21.5 17.2 0.4 201 chr2L 20602676 intron CR44909 - chr2L 20602776 intron CR44909 - chr2L 20602877 intron CR44909 - chr2L_8_20600001 chr2L_20600001 RAL-301_125b 1260 chr2L 20607732 20607807 chr2L 20608106 20608180 11 371 26.0 28.5 27.2 0.4 448 chr2L 20607732 intron,3` UTR CR44909 -,CR43608 - chr2L 20607956 intron CR44909 - chr2L 20608180 intron CR44909 - chr2L_11_20605001 chr2L_20605001 RAL-301_125b 1261 chr2L 20618147 20618213 chr2L 20618400 20618451 27 250 16.0 17.0 16.5 1.5 304 chr2L 20618147 intron CR44909 - chr2L 20618299 intron CR44909 - chr2L 20618451 intron,3` UTR CR44909 -,mir-288 - chr2L_27_20615001 chr2L_20615001 RAL-301_125b 1262 chr2L 20630661 20630732 chr2L 20630989 20631057 16 327 12.0 16.0 14.0 1.1 396 chr2L 20630661 intergenic not near genes chr2L 20630859 intergenic not near genes chr2L 20631057 intergenic not near genes chr2L_16_20630001 chr2L_20630001 RAL-301_125b 1263 chr2L 20639477 20639528 chr2L 20639803 20639854 INE-1 10 326 11.0 25.5 18.2 0.5 377 chr2L 20639477 intergenic not near genes chr2L 20639666 intergenic CG31680 + chr2L 20639854 intergenic CG31680 + chr2L_10_20635001 chr2L_20635001 RAL-301_125b 1264 chr2L 20668671 20668712 chr2L 20668776 20668838 4 118 33.0 28.5 30.8 0.1 167 chr2L 20668671 intron CG31678 - chr2L 20668754 intron CG31678 - chr2L 20668838 intron CG31678 - chr2L_4_20665001 chr2L_20665001 RAL-301_125b 1265 chr2L 20674781 20674863 chr2L 20674916 20674991 17 128 6.0 7.5 6.8 2.2 210 chr2L 20674781 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674991 intron CG31678 - chr2L_17_20670001 chr2L_20670001 RAL-301_125b 1266 chr2L 20695747 20695820 chr2L 20695885 20695958 31 138 9.0 6.5 7.8 3.5 211 chr2L 20695747 intron Hr38 - chr2L 20695852 intron Hr38 - chr2L 20695958 intron Hr38 - chr2L_31_20695001 chr2L_20695001 RAL-301_125b 1267 chr2L 20801647 20801686 chr2L 20801776 20801836 8 138 18.0 13.0 15.5 0.5 189 chr2L 20801647 intron CG9328 + chr2L 20801742 intron CG9328 + chr2L 20801836 intron CG9328 + chr2L_8_20800001 chr2L_20800001 RAL-301_125b 1268 chr2L 20826470 20826533 chr2L 20826601 20826663 18 130 19.0 18.0 18.5 0.9 193 chr2L 20826470 intron CG9331 + chr2L 20826566 intron CG9331 + chr2L 20826663 exon CG9331 + chr2L_18_20825001 chr2L_20825001 RAL-301_125b 1269 chr2L 20835765 20835830 chr2L 20836532 20836597 Quasimodo 25 767 12.5 7.0 9.8 2.3 832 chr2L 20835765 5` UTR Oseg5 - chr2L 20836181 intergenic Oseg5 -,Spn38F - chr2L 20836597 intergenic Spn38F - chr2L_25_20835001 chr2L_20835001 RAL-301_125b 1270 chr2L 20839982 20840054 chr2L 20840244 20840316 15 262 17.0 10.0 13.5 1.0 334 chr2L 20839982 intergenic not near genes chr2L 20840149 intergenic not near genes chr2L 20840316 intergenic CG31676 + chr2L_15_20840001 chr2L_20840001 RAL-301_125b 1271 chr2L 20846716 20846783 chr2L 20846850 20846917 45 133 11.0 6.5 8.8 4.6 201 chr2L 20846716 intron CG31676 + chr2L 20846816 intron CG31676 + chr2L 20846917 intron CG31676 + chr2L_45_20845001 chr2L_20845001 RAL-301_125b 1272 chr2L 20891484 20891546 chr2L 20896635 20896697 jockey 25 5150 6.5 11.0 8.8 2.6 5213 chr2L 20891484 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896697 intron,intron CG43739 -,sky - chr2L_25_20890001 chr2L_20890001 RAL-301_125b 1273 chr2L 20901426 20901480 chr2L 20902640 20902684 1360 5 1212 7.5 16.0 11.8 0.4 1258 chr2L 20901426 intron,intron CG43739 -,sky - chr2L 20902055 intron,intron CG43739 -,sky - chr2L 20902684 intron,intron CG43739 -,sky - chr2L_5_20900001 chr2L_20900001 RAL-301_125b 1274 chr2L 20910989 20911056 chr2L 20911115 20911182 15 126 5.0 9.0 7.0 1.9 193 chr2L 20910989 intron,intron CG43739 -,sky - chr2L 20911086 intron,intron CG43739 -,sky - chr2L 20911182 intron,intron CG43739 -,sky - chr2L_15_20910001 chr2L_20910001 RAL-301_125b 1275 chr2L 20928871 20928906 chr2L 20929461 20929496 19 590 12.0 16.0 14.0 1.3 625 chr2L 20928871 intergenic not near genes chr2L 20929184 intergenic CG9270 - chr2L 20929496 3` UTR CG9270 - chr2L_19_20925001 chr2L_20925001 RAL-301_125b 1276 chr2L 20946896 20946960 chr2L 20947033 20947097 34 137 8.5 9.0 8.8 3.5 201 chr2L 20946896 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947097 intergenic CR44606 - chr2L_34_20945001 chr2L_20945001 RAL-301_125b 1277 chr2L 20967037 20967107 chr2L 20967173 20967243 18 136 5.5 10.0 7.8 2.0 206 chr2L 20967037 3` UTR CG42238 - chr2L 20967140 3` UTR CG42238 - chr2L 20967243 3` UTR CG42238 - chr2L_18_20965001 chr2L_20965001 RAL-301_125b 1278 chr2L 20976606 20976663 chr2L 20981471 20981528 X-element 29 4865 8.0 7.5 7.8 3.3 4922 chr2L 20976606 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981528 intron CG42238 - chr2L_29_20975001 chr2L_20975001 RAL-301_125b 1279 chr2L 20990992 20991060 chr2L 20991120 20991188 31 127 8.5 4.5 6.5 4.1 196 chr2L 20990992 intron CG42238 - chr2L 20991090 intron CG42238 - chr2L 20991188 intron CG42238 - chr2L_31_20990001 chr2L_20990001 RAL-301_125b 1280 chr2L 21020235 21020300 chr2L 21023962 21024022 NOF 34 3725 10.0 8.5 9.2 3.3 3787 chr2L 21020235 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21024022 intron CG42238 - chr2L_34_21020001 chr2L_21020001 RAL-301_125b 1281 chr2L 21041085 21041166 chr2L 21049396 21049442 Tirant 27 8304 7.0 9.0 8.0 3.0 8357 chr2L 21041085 intron CG42238 - chr2L 21045264 intron CG42238 - chr2L 21049442 intron CG42238 - chr2L_27_21045001 chr2L_21045001 RAL-301_125b 1282 chr2L 21074876 21074946 chr2L 21075017 21075087 25 141 8.5 8.5 8.5 2.6 211 chr2L 21074876 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075087 intergenic tadr + chr2L_25_21070001 chr2L_21070001 RAL-301_125b 1283 chr2L 21086417 21086447 chr2L 21086582 21086611 15 163 7.5 14.5 11.0 1.2 194 chr2L 21086417 5` UTR CG33509 - chr2L 21086514 intergenic CG33509 -,ppk13 - chr2L 21086611 intergenic CG33509 -,ppk13 - chr2L_15_21085001 chr2L_21085001 RAL-301_125b 1284 chr2L 21088868 21088946 chr2L 21089001 21089079 35 131 8.5 8.5 8.5 3.7 211 chr2L 21088868 intergenic ppk13 - chr2L 21088974 intergenic ppk13 -,CG9259 + chr2L 21089079 intergenic CG9259 +,ppk13 - chr2L_35_21085001 chr2L_21085001 RAL-301_125b 1285 chr2L 21158837 21158861 chr2L 21158964 21158988 14 127 17.5 8.0 12.8 1.0 151 chr2L 21158837 intergenic CG9248 +,CG9249 - chr2L 21158912 5` UTR CG9248 + chr2L 21158988 5` UTR CG9248 + chr2L_14_21155001 chr2L_21155001 RAL-301_125b 1286 chr2L 21158872 21158881 chr2L 21158999 21159008 7 127 15.0 16.5 15.8 0.4 136 chr2L 21158872 intergenic CG9248 +,CG9249 - chr2L 21158940 5` UTR CG9248 + chr2L 21159008 5` UTR CG9248 + chr2L_7_21155001 chr2L_21155001 RAL-301_125b 1287 chr2L 21158884 21158903 chr2L 21158997 21159030 9 125 9.0 16.5 12.8 0.7 146 chr2L 21158884 intergenic CG9248 +,CG9249 - chr2L 21158957 5` UTR CG9248 + chr2L 21159030 exon CG9248 + chr2L_9_21155001 chr2L_21155001 RAL-301_125b 1288 chr2L 21245265 21245303 chr2L 21245514 21245573 17 278 0.5 8.5 4.5 3.1 308 chr2L 21245265 intron Hr39 + chr2L 21245419 intron Hr39 + chr2L 21245573 intron Hr39 + chr2L_17_21245001 chr2L_21245001 RAL-301_125b 1289 chr2L 21286564 21286623 chr2L 21286692 21286752 21 128 12.0 9.5 10.8 1.8 188 chr2L 21286564 exon Mio - chr2L 21286658 intron Mio - chr2L 21286752 intron Mio - chr2L_21_21285001 chr2L_21285001 RAL-301_125b 1290 chr2L 21337810 21337814 chr2L 21338325 21338329 BS 4 515 16.5 8.0 12.2 0.3 519 chr2L 21337810 intron dimm + chr2L 21338070 intron dimm + chr2L 21338329 intron dimm + chr2L_4_21335001 chr2L_21335001 RAL-301_125b 1291 chr2L 21347508 21347534 chr2L 21355030 21355056 blood 14 7521 18.0 12.0 15.0 0.9 7548 chr2L 21347508 intron Tsp39D + chr2L 21351282 intron Tsp39D + chr2L 21355056 intron Tsp39D + chr2L_14_21350001 chr2L_21350001 RAL-301_125b 1292 chr2L 21347537 21347572 chr2L 21355028 21355094 blood 16 7518 14.0 12.0 13.0 1.1 7557 chr2L 21347537 intron Tsp39D + chr2L 21351316 intron Tsp39D + chr2L 21355094 intron Tsp39D + chr2L_16_21350001 chr2L_21350001 RAL-301_125b 1293 chr2L 21355561 21355627 chr2L 21355756 21355822 35 194 10.5 4.5 7.5 4.1 261 chr2L 21355561 exon Tsp39D + chr2L 21355692 intron Tsp39D + chr2L 21355822 intron Tsp39D + chr2L_35_21355001 chr2L_21355001 RAL-301_125b 1294 chr2L 21392172 21392228 chr2L 21392308 21392364 17 136 6.0 5.0 5.5 2.6 192 chr2L 21392172 3` UTR nrv3 + chr2L 21392268 3` UTR nrv3 + chr2L 21392364 3` UTR nrv3 + chr2L_17_21390001 chr2L_21390001 RAL-301_125b 1295 chr2L 21596987 21597054 chr2L 21604781 21604783 roo 6 7778 8.0 5.5 6.8 0.8 7796 chr2L 21596987 intergenic not near genes chr2L 21600885 intergenic not near genes chr2L 21604783 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-301_125b 1296 chr2L 21691789 21691808 chr2L 21698309 21698328 Burdock 8 6520 15.5 0.0 7.8 0.9 6539 chr2L 21691789 intron CG31619 + chr2L 21695058 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-301_125b 1297 chr2L 21750053 21750130 chr2L 21750421 21750503 29 371 7.5 3.5 5.5 4.5 450 chr2L 21750053 intron step - chr2L 21750278 intron step - chr2L 21750503 intron step - chr2L_29_21750001 chr2L_21750001 RAL-301_125b 1298 chr2L 21754622 21754674 chr2L 21754753 21754805 21 131 11.0 9.0 10.0 1.9 183 chr2L 21754622 intron step - chr2L 21754714 intron step - chr2L 21754805 intron step - chr2L_21_21750001 chr2L_21750001 RAL-301_125b 1299 chr2L 21771937 21771996 chr2L 21772066 21772125 30 129 10.0 9.5 9.8 2.8 188 chr2L 21771937 intron CG31612 - chr2L 21772031 intron CG31612 - chr2L 21772125 intron CG31612 - chr2L_30_21770001 chr2L_21770001 RAL-301_125b 1300 chr2L 21798028 21798065 chr2L 21877529 21877566 14 79501 57.0 43.5 50.2 0.3 79538 chr2L 21798028 intergenic CR44269 - chr2L 21837797 intergenic not near genes chr2L 21877566 intergenic not near genes chr2L_14_21835001 chr2L_21835001 RAL-301_125b 1301 chr2L 21819281 21819359 chr2L 21819419 21819452 23 133 6.0 6.5 6.2 3.2 171 chr2L 21819281 intergenic CR44786 + chr2L 21819366 intergenic CR44786 + chr2L 21819452 intergenic CR44786 + chr2L_23_21815001 chr2L_21815001 RAL-301_125b 1302 chr2L 21824099 21824148 chr2L 21824236 21824285 18 136 0.0 13.0 6.5 2.4 186 chr2L 21824099 intergenic not near genes chr2L 21824192 intergenic not near genes chr2L 21824285 intergenic not near genes chr2L_18_21820001 chr2L_21820001 RAL-301_125b 1303 chr2L 21869059 21869099 chr2L 21869178 21869178 14 128 11.5 7.0 9.2 1.4 119 chr2L 21869059 5` UTR CR44917 + chr2L 21869118 5` UTR CR44917 + chr2L 21869178 5` UTR CR44917 + chr2L_14_21865001 chr2L_21865001 RAL-301_125b 1304 chr2L 21929032 21929065 chr2L 21929184 21929217 4 152 11.5 12.0 11.8 0.3 185 chr2L 21929032 intergenic not near genes chr2L 21929124 intergenic not near genes chr2L 21929217 intergenic not near genes chr2L_4_21925001 chr2L_21925001 RAL-301_125b 1305 chr2L 21933885 21933916 chr2L 21934015 21934030 5 123 12.5 14.5 13.5 0.3 145 chr2L 21933885 intergenic not near genes chr2L 21933958 intergenic not near genes chr2L 21934030 intergenic not near genes chr2L_5_21930001 chr2L_21930001 RAL-301_125b 1306 chr2L 21953797 21953857 chr2L 21954648 21954725 34 853 63.0 59.5 61.2 0.5 928 chr2L 21953797 intergenic not near genes chr2L 21954261 intergenic not near genes chr2L 21954725 intergenic not near genes chr2L_34_21950001 chr2L_21950001 RAL-301_125b 1307 chr2L 21981643 21981707 chr2L 21990848 21990887 roo 34 9213 8.5 6.0 7.2 4.1 9244 chr2L 21981643 exon CG2528 - chr2L 21986265 intron CG2528 - chr2L 21990887 exon CG2528 - chr2L_34_21985001 chr2L_21985001 RAL-301_125b 1308 chr2L 21996909 21996966 chr2L 21997040 21997097 17 130 7.5 8.5 8.0 1.9 188 chr2L 21996909 intergenic not near genes chr2L 21997003 intergenic not near genes chr2L 21997097 intergenic not near genes chr2L_17_21995001 chr2L_21995001 RAL-301_125b 1309 chr2L 22001599 22001674 chr2L 22001725 22001800 33 125 9.5 5.5 7.5 3.9 201 chr2L 22001599 intergenic not near genes chr2L 22001700 intergenic not near genes chr2L 22001800 intergenic not near genes chr2L_33_22000001 chr2L_22000001 RAL-301_125b 1310 chr2L 22007882 22007951 chr2L 22008014 22008083 29 132 6.5 7.0 6.8 3.7 201 chr2L 22007882 intergenic not near genes chr2L 22007982 intergenic not near genes chr2L 22008083 intergenic not near genes chr2L_29_22005001 chr2L_22005001 RAL-301_125b 1311 chr2L 22025785 22025847 chr2L 22025913 22025976 30 126 7.0 11.5 9.2 2.9 191 chr2L 22025785 intergenic tio + chr2L 22025880 intergenic tio + chr2L 22025976 intergenic tio + chr2L_30_22025001 chr2L_22025001 RAL-301_125b 1312 chr2L 22047205 22047255 chr2L 22047380 22047430 20 171 5.5 15.0 10.2 1.8 225 chr2L 22047205 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047430 intergenic not near genes chr2L_20_22045001 chr2L_22045001 RAL-301_125b 1313 chr2L 22073015 22073024 chr2L 22073150 22073159 INE-1 4 135 15.0 5.0 10.0 0.4 144 chr2L 22073015 intergenic CG31702 + chr2L 22073087 intergenic CG31702 + chr2L 22073159 intergenic CG31702 + chr2L_4_22070001 chr2L_22070001 RAL-301_125b 1314 chr2L 22107329 22107349 chr2L 22107506 22107526 6 177 18.0 0.0 9.0 0.6 197 chr2L 22107329 intergenic CG10834 - chr2L 22107428 intergenic CG10834 - chr2L 22107526 intergenic CG10834 - chr2L_6_22105001 chr2L_22105001 RAL-301_125b 1315 chr2L 22212086 22212159 chr2L 22212683 22212756 30 597 5.5 8.0 6.8 3.8 670 chr2L 22212086 intron Ir40a - chr2L 22212421 intron Ir40a - chr2L 22212756 exon Ir40a - chr2L_30_22210001 chr2L_22210001 RAL-301_125b 1316 chr2L 22215866 22215929 chr2L 22216002 22216065 22 136 8.0 10.0 9.0 2.2 199 chr2L 22215866 intergenic not near genes chr2L 22215966 intergenic not near genes chr2L 22216065 intergenic not near genes chr2L_22_22215001 chr2L_22215001 RAL-301_125b 1317 chr2L 22239382 22239461 chr2L 22239508 22239556 26 127 6.5 10.0 8.2 2.8 174 chr2L 22239382 intron CR43765 - chr2L 22239469 3` UTR CR43765 - chr2L 22239556 3` UTR CR43765 - chr2L_26_22235001 chr2L_22235001 RAL-301_125b 1318 chr2L 22258572 22258641 chr2L 22260746 22260815 G6 28 2174 7.5 9.0 8.2 3.0 2243 chr2L 22258572 intergenic Tif-IA + chr2L 22259694 intergenic not near genes chr2L 22260815 intergenic not near genes chr2L_28_22255001 chr2L_22255001 RAL-301_125b 1319 chr2L 22294308 22294375 chr2L 22294446 22294513 9 138 37.0 31.5 34.2 0.3 205 chr2L 22294308 intergenic not near genes chr2L 22294410 intergenic not near genes chr2L 22294513 intergenic not near genes chr2L_9_22290001 chr2L_22290001 RAL-301_125b 1320 chr2L 22296866 22296921 chr2L 22297043 22297098 6 177 12.0 8.0 10.0 0.5 232 chr2L 22296866 intergenic not near genes chr2L 22296982 intergenic not near genes chr2L 22297098 intergenic not near genes chr2L_6_22295001 chr2L_22295001 RAL-301_125b 1321 chr2L 22305712 22305781 chr2L 22305840 22305909 14 128 8.0 10.0 9.0 1.4 197 chr2L 22305712 intergenic not near genes chr2L 22305810 intergenic not near genes chr2L 22305909 intergenic not near genes chr2L_14_22305001 chr2L_22305001 RAL-301_125b 1322 chr2L 22581928 22581991 chr2L 22583767 22583830 S-element 23 1838 9.0 12.5 10.8 1.9 1902 chr2L 22581928 intron CG17494 + chr2L 22582879 intron CG17494 + chr2L 22583830 intron CG17494 + chr2L_23_22580001 chr2L_22580001 RAL-301_125b 1323 chr2L 22776377 22776441 chr2L 22778216 22778280 S-element 23 1839 10.5 11.5 11.0 1.9 1903 chr2L 22776377 intergenic not near genes chr2L 22777328 intergenic not near genes chr2L 22778280 intergenic not near genes chr2L_23_22775001 chr2L_22775001 RAL-301_125b 1324 chr2L 23181356 23181369 chr2L 23181515 23181528 5 159 27.0 26.5 26.8 0.2 172 chr2L 23181356 intergenic not near genes chr2L 23181442 intergenic not near genes chr2L 23181528 intergenic not near genes chr2L_5_23180001 chr2L_23180001 RAL-301_125b 1325 chr2L 23233894 23233896 chr2L 23234023 23234025 5 129 27.0 14.0 20.5 0.2 131 chr2L 23233894 intergenic not near genes chr2L 23233960 intergenic not near genes chr2L 23234025 intergenic not near genes chr2L_5_23230001 chr2L_23230001 RAL-301_125b 1326 chr2L 23234012 23234029 chr2L 23239525 23239542 Rt1c 6 5512 8.5 18.5 13.5 0.4 5530 chr2L 23234012 intergenic not near genes chr2L 23236777 intergenic not near genes chr2L 23239542 intergenic not near genes chr2L_6_23235001 chr2L_23235001 RAL-301_125b 1327 chr2R 469917 469940 chr2R 473208 473226 F-element 14 3289 11.5 9.0 10.2 1.2 3309 chr2R 469917 intergenic not near genes chr2R 471572 intergenic not near genes chr2R 473226 intergenic not near genes chr2R_14_470001 chr2R_470001 RAL-301_125b 1328 chr2R 469942 469970 chr2R 473202 473229 F-element 7 3278 8.0 8.5 8.2 0.8 3287 chr2R 469942 intergenic not near genes chr2R 471586 intergenic not near genes chr2R 473229 intergenic not near genes chr2R_7_470001 chr2R_470001 RAL-301_125b 1329 chr2R 529315 529346 chr2R 537990 538016 Max-element 12 8675 4.0 11.0 7.5 1.4 8701 chr2R 529315 intron CG40378 + chr2R 533666 intron CG40378 + chr2R 538016 intron CG40378 + chr2R_12_530001 chr2R_530001 RAL-301_125b 1330 chr2R 552749 552776 chr2R 553976 554029 1360 5 1243 4.5 7.5 6.0 0.7 1280 chr2R 552749 intron CG40378 + chr2R 553389 intron CG40378 + chr2R 554029 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-301_125b 1331 chr2R 699080 699110 chr2R 705346 705376 297 10 6266 15.5 9.5 12.5 0.7 6296 chr2R 699080 intron CG43676 + chr2R 702228 intron CG43676 + chr2R 705376 exon CG43676 + chr2R_10_700001 chr2R_700001 RAL-301_125b 1332 chr2R 952382 952450 chr2R 952555 952622 6 173 18.0 21.0 19.5 0.3 240 chr2R 952382 intergenic not near genes chr2R 952502 intergenic not near genes chr2R 952622 intergenic not near genes chr2R_6_950001 chr2R_950001 RAL-301_125b 1333 chr2R 1365819 1365879 chr2R 1365981 1366041 8 161 20.0 20.0 20.0 0.4 222 chr2R 1365819 intron l(2)41Ab + chr2R 1365930 intron l(2)41Ab + chr2R 1366041 intron l(2)41Ab + chr2R_8_1365001 chr2R_1365001 RAL-301_125b 1334 chr2R 1513907 1513929 chr2R 1514110 1514132 10 201 110.0 90.0 100.0 0.1 225 chr2R 1513907 3` UTR Maf1 - chr2R 1514020 3` UTR Maf1 - chr2R 1514132 3` UTR Maf1 - chr2R_10_1510001 chr2R_1510001 RAL-301_125b 1335 chr2R 1513933 1513971 chr2R 1514101 1514173 12 192 102.0 87.5 94.8 0.1 240 chr2R 1513933 3` UTR Maf1 - chr2R 1514053 3` UTR Maf1 - chr2R 1514173 3` UTR Maf1 - chr2R_12_1510001 chr2R_1510001 RAL-301_125b 1336 chr2R 1516564 1516602 chr2R 1521342 1521380 1731 36 4778 37.0 21.0 29.0 1.2 4816 chr2R 1516564 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521380 5` UTR Maf1 - chr2R_36_1515001 chr2R_1515001 RAL-301_125b 1337 chr2R 1732523 1732538 chr2R 1732655 1732670 INE-1 5 132 12.0 17.5 14.8 0.3 147 chr2R 1732523 intron CG41520 + chr2R 1732596 intron CG41520 + chr2R 1732670 intron CG41520 + chr2R_5_1730001 chr2R_1730001 RAL-301_125b 1338 chr2R 1755923 1755962 chr2R 1756087 1756126 5 164 15.5 9.0 12.2 0.4 203 chr2R 1755923 intron CG41520 + chr2R 1756024 intron CG41520 + chr2R 1756126 intron CG41520 + chr2R_5_1755001 chr2R_1755001 RAL-301_125b 1339 chr2R 2015092 2015156 chr2R 2015219 2015282 7 127 23.5 20.5 22.0 0.3 190 chr2R 2015092 intron CG17684 - chr2R 2015187 intron CG17684 - chr2R 2015282 intron CG17684 - chr2R_7_2015001 chr2R_2015001 RAL-301_125b 1340 chr2R 2110463 2110502 chr2R 2118071 2118110 17.6 14 7608 11.5 7.5 9.5 1.3 7647 chr2R 2110463 intron CG17684 - chr2R 2114286 intron CG17684 - chr2R 2118110 intron CG17684 - chr2R_14_2110001 chr2R_2110001 RAL-301_125b 1341 chr2R 2264019 2264024 chr2R 5209704 5209710 mdg1 6 2945686 20.5 35.0 27.8 0.2 2945691 chr2R 2264019 intergenic not near genes chr2R 3736864 intergenic not near genes chr2R 5209710 intron Nipped-A - chr2R_6_3735001 chr2R_3735001 RAL-301_125b 1342 chr2R 2498948 2499010 chr2R 2508145 2508207 roo 26 9197 6.5 7.5 7.0 3.2 9259 chr2R 2498948 intron MFS17 - chr2R 2503578 intron MFS17 - chr2R 2508207 intron MFS17 - chr2R_26_2500001 chr2R_2500001 RAL-301_125b 1343 chr2R 2508262 2508290 chr2R 2508450 2508478 4 188 22.0 27.5 24.8 0.2 216 chr2R 2508262 intron MFS17 - chr2R 2508370 intron MFS17 - chr2R 2508478 intron MFS17 - chr2R_4_2505001 chr2R_2505001 RAL-301_125b 1344 chr2R 1373049 1373073 chr2R 2589297 2589321 Cr1a 5 1216248 27.0 48.0 37.5 0.1 1216272 chr2R 1373049 intron l(2)41Ab + chr2R 1981185 intron CG17684 - chr2R 2589321 intergenic not near genes chr2R_5_1980001 chr2R_1980001 RAL-301_125b 1345 chr2R 2590048 2590055 chr2R 2590859 2590866 copia 4 811 20.0 13.5 16.8 0.2 818 chr2R 2590048 intergenic not near genes chr2R 2590457 intergenic not near genes chr2R 2590866 intergenic not near genes chr2R_4_2590001 chr2R_2590001 RAL-301_125b 1346 chr2R 2591488 2591505 chr2R 2594214 2594224 roo 7 2725 33.0 32.5 32.8 0.2 2736 chr2R 2591488 intergenic not near genes chr2R 2592856 intergenic not near genes chr2R 2594224 intergenic not near genes chr2R_7_2590001 chr2R_2590001 RAL-301_125b 1347 chr2R 2875347 2875394 chr2R 2878912 2878959 HMS-Beagle 5 3564 29.5 29.5 29.5 0.2 3612 chr2R 2875347 intergenic not near genes chr2R 2877153 intergenic not near genes chr2R 2878959 intergenic not near genes chr2R_5_2875001 chr2R_2875001 RAL-301_125b 1348 chr2R 3107711 3107723 chr2R 3108445 3108457 5 734 17.0 24.5 20.8 0.2 746 chr2R 3107711 intron CG42596 + chr2R 3108084 intron CG42596 + chr2R 3108457 intron CG42596 + chr2R_5_3105001 chr2R_3105001 RAL-301_125b 1349 chr2R 3144041 3144106 chr2R 3393369 3393434 Doc 9 249328 26.0 22.5 24.2 0.4 249393 chr2R 3144041 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393434 intergenic not near genes chr2R_9_3265001 chr2R_3265001 RAL-301_125b 1350 chr2R 3291952 3292102 chr2R 3915171 3915313 5 623216 23.0 18.0 20.5 0.2 623361 chr2R 3291952 intergenic not near genes chr2R 3603632 intergenic not near genes chr2R 3915313 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-301_125b 1351 chr2R 3293718 3293773 chr2R 3293836 3293901 5 126 6.5 3.0 4.8 0.9 183 chr2R 3293718 intergenic not near genes chr2R 3293810 intergenic not near genes chr2R 3293901 intergenic not near genes chr2R_5_3290001 chr2R_3290001 RAL-301_125b 1352 chr2R 3515233 3515275 chr2R 3515371 3515413 4 138 38.0 37.0 37.5 0.1 180 chr2R 3515233 intergenic not near genes chr2R 3515323 intergenic not near genes chr2R 3515413 intergenic not near genes chr2R_4_3515001 chr2R_3515001 RAL-301_125b 1353 chr2R 3532577 3532628 chr2R 3536070 3536121 Doc 9 3493 8.0 9.0 8.5 0.9 3544 chr2R 3532577 intergenic not near genes chr2R 3534349 intergenic not near genes chr2R 3536121 intergenic not near genes chr2R_9_3530001 chr2R_3530001 RAL-301_125b 1354 chr2R 4186877 4186943 chr2R 4187275 4187341 18 398 18.5 12.0 15.2 1.1 464 chr2R 4186877 3` UTR CG40127 - chr2R 4187109 3` UTR CG40127 - chr2R 4187341 3` UTR CG40127 - chr2R_18_4185001 chr2R_4185001 RAL-301_125b 1355 chr2R 4312909 4312979 chr2R 4313043 4313113 12 132 32.5 35.5 34.0 0.3 204 chr2R 4312909 intergenic not near genes chr2R 4313011 intergenic not near genes chr2R 4313113 intergenic not near genes chr2R_12_4310001 chr2R_4310001 RAL-301_125b 1356 chr2R 4603302 4603365 chr2R 4603435 4603462 9 129 12.5 15.5 14.0 0.6 160 chr2R 4603302 intron p120ctn + chr2R 4603382 intron p120ctn + chr2R 4603462 intron p120ctn + chr2R_9_4600001 chr2R_4600001 RAL-301_125b 1357 chr2R 4604512 4604577 chr2R 4604641 4604707 23 127 11.0 13.5 12.2 1.7 195 chr2R 4604512 intron p120ctn + chr2R 4604610 intron p120ctn + chr2R 4604707 intron p120ctn + chr2R_23_4600001 chr2R_4600001 RAL-301_125b 1358 chr2R 4621269 4621330 chr2R 4621858 4621920 8 590 26.0 32.0 29.0 0.3 651 chr2R 4621269 3` UTR CR44101 - chr2R 4621594 3` UTR CR44101 - chr2R 4621920 3` UTR CR44101 - chr2R_8_4620001 chr2R_4620001 RAL-301_125b 1359 chr2R 4622908 4622985 chr2R 4624117 4624168 1360 25 1207 9.5 7.5 8.5 2.6 1260 chr2R 4622908 intergenic CR44101 - chr2R 4623538 intergenic not near genes chr2R 4624168 intergenic not near genes chr2R_25_4620001 chr2R_4620001 RAL-301_125b 1360 chr2R 4624601 4624663 chr2R 4626555 4626617 Bica 24 1955 6.5 10.0 8.2 2.6 2016 chr2R 4624601 intergenic not near genes chr2R 4625609 intergenic not near genes chr2R 4626617 intergenic not near genes chr2R_24_4625001 chr2R_4625001 RAL-301_125b 1361 chr2R 4634159 4634183 chr2R 4634282 4634312 4 128 17.5 22.5 20.0 0.2 153 chr2R 4634159 intergenic not near genes chr2R 4634236 intergenic not near genes chr2R 4634312 intergenic not near genes chr2R_4_4630001 chr2R_4630001 RAL-301_125b 1362 chr2R 4702470 4702503 chr2R 4702656 4702691 6 188 12.5 16.5 14.5 0.4 221 chr2R 4702470 intron Nipped-B - chr2R 4702580 intron Nipped-B - chr2R 4702691 intron Nipped-B - chr2R_6_4700001 chr2R_4700001 RAL-301_125b 1363 chr2R 4750301 4750357 chr2R 4751508 4751520 1360 17 1204 22.0 15.5 18.8 0.9 1219 chr2R 4750301 intron conu + chr2R 4750910 intron conu + chr2R 4751520 intron conu + chr2R_17_4750001 chr2R_4750001 RAL-301_125b 1364 chr2R 4781676 4781739 chr2R 4781841 4781904 9 164 26.5 31.5 29.0 0.3 228 chr2R 4781676 intergenic not near genes chr2R 4781790 intergenic not near genes chr2R 4781904 intergenic not near genes chr2R_9_4780001 chr2R_4780001 RAL-301_125b 1365 chr2R 4783374 4783431 chr2R 4783502 4783559 11 122 26.5 30.5 28.5 0.4 185 chr2R 4783374 intergenic not near genes chr2R 4783466 intergenic not near genes chr2R 4783559 intergenic not near genes chr2R_11_4780001 chr2R_4780001 RAL-301_125b 1366 chr2R 4821176 4821244 chr2R 4821311 4821380 23 133 10.0 5.5 7.8 2.6 204 chr2R 4821176 intron CG17528 - chr2R 4821278 intron CG17528 - chr2R 4821380 intron CG17528 - chr2R_23_4820001 chr2R_4820001 RAL-301_125b 1367 chr2R 4838829 4838895 chr2R 4840402 4840468 transib2 7 1573 19.0 25.5 22.2 0.3 1639 chr2R 4838829 intergenic not near genes chr2R 4839648 intergenic not near genes chr2R 4840468 intergenic not near genes chr2R_7_4835001 chr2R_4835001 RAL-301_125b 1368 chr2R 5008952 5009007 chr2R 5009309 5009360 17 357 17.5 17.0 17.2 0.9 408 chr2R 5008952 intron Ir41a + chr2R 5009156 intron Ir41a + chr2R 5009360 intron Ir41a + chr2R_17_5005001 chr2R_5005001 RAL-301_125b 1369 chr2R 5009132 5009199 chr2R 5009259 5009302 14 117 5.0 4.0 4.5 2.5 170 chr2R 5009132 intron Ir41a + chr2R 5009217 intron Ir41a + chr2R 5009302 intron Ir41a + chr2R_14_5005001 chr2R_5005001 RAL-301_125b 1370 chr2R 5019235 5019304 chr2R 5019371 5019440 16 136 8.0 6.5 7.2 2.0 205 chr2R 5019235 intron Ir41a + chr2R 5019338 intron Ir41a + chr2R 5019440 intron Ir41a + chr2R_16_5015001 chr2R_5015001 RAL-301_125b 1371 chr2R 5038478 5038486 chr2R 5039325 5039333 4 846 23.5 0.0 11.8 0.3 855 chr2R 5038478 intergenic not near genes chr2R 5038906 intergenic not near genes chr2R 5039333 intergenic not near genes chr2R_4_5035001 chr2R_5035001 RAL-301_125b 1372 chr2R 5040746 5040764 chr2R 5041286 5041304 6 540 0.0 16.0 8.0 0.7 558 chr2R 5040746 intergenic not near genes chr2R 5041025 intergenic not near genes chr2R 5041304 intergenic not near genes chr2R_6_5040001 chr2R_5040001 RAL-301_125b 1373 chr2R 5075226 5075361 chr2R 5075767 5075810 6 510 27.5 21.5 24.5 0.2 584 chr2R 5075226 intergenic not near genes chr2R 5075518 intergenic not near genes chr2R 5075810 intergenic not near genes chr2R_6_5075001 chr2R_5075001 RAL-301_125b 1374 chr2R 5080754 5080812 chr2R 5080890 5080953 16 138 17.5 19.5 18.5 0.8 199 chr2R 5080754 intergenic not near genes chr2R 5080854 intergenic not near genes chr2R 5080953 intergenic not near genes chr2R_16_5080001 chr2R_5080001 RAL-301_125b 1375 chr2R 5125209 5125255 chr2R 5125577 5125623 8 368 22.5 17.5 20.0 0.4 414 chr2R 5125209 intron gus - chr2R 5125416 intron gus - chr2R 5125623 intron gus - chr2R_8_5125001 chr2R_5125001 RAL-301_125b 1376 chr2R 5144898 5144924 chr2R 5145024 5145045 6 125 18.5 14.0 16.2 0.3 147 chr2R 5144898 intron Atf6 + chr2R 5144972 intron Atf6 + chr2R 5145045 intron Atf6 + chr2R_6_5140001 chr2R_5140001 RAL-301_125b 1377 chr2R 5188657 5188728 chr2R 5189400 5189471 gypsy8 16 742 20.5 23.5 22.0 0.7 814 chr2R 5188657 intron Nipped-A - chr2R 5189064 intron Nipped-A - chr2R 5189471 intron Nipped-A - chr2R_16_5185001 chr2R_5185001 RAL-301_125b 1378 chr2R 5209737 5209812 chr2R 5210320 5210395 23 582 10.0 19.5 14.8 1.5 658 chr2R 5209737 intron Nipped-A - chr2R 5210066 intron Nipped-A - chr2R 5210395 intron Nipped-A - chr2R_23_5210001 chr2R_5210001 RAL-301_125b 1379 chr2R 5267553 5267625 chr2R 5267690 5267762 16 136 38.0 42.0 40.0 0.4 209 chr2R 5267553 intron d4 + chr2R 5267658 intron d4 + chr2R 5267762 intron d4 + chr2R_16_5265001 chr2R_5265001 RAL-301_125b 1380 chr2R 5301886 5301898 chr2R 5302081 5302093 4 195 21.0 22.0 21.5 0.2 207 chr2R 5301886 intergenic not near genes chr2R 5301990 intergenic not near genes chr2R 5302093 intergenic not near genes chr2R_4_5300001 chr2R_5300001 RAL-301_125b 1381 chr2R 5303441 5303517 chr2R 5303579 5303655 24 138 23.5 22.5 23.0 1.0 214 chr2R 5303441 intergenic not near genes chr2R 5303548 intergenic not near genes chr2R 5303655 intergenic not near genes chr2R_24_5300001 chr2R_5300001 RAL-301_125b 1382 chr2R 5341314 5341384 chr2R 5341562 5341612 5 237 6.5 6.5 6.5 0.7 298 chr2R 5341314 intergenic CG10465 - chr2R 5341463 intergenic CG10465 - chr2R 5341612 intergenic not near genes chr2R_5_5340001 chr2R_5340001 RAL-301_125b 1383 chr2R 5363450 5363514 chr2R 5363578 5363642 16 128 9.0 8.0 8.5 1.7 192 chr2R 5363450 5` UTR CR42646 + chr2R 5363546 intron CR42646 + chr2R 5363642 intron CR42646 + chr2R_16_5360001 chr2R_5360001 RAL-301_125b 1384 chr2R 5396211 5396277 chr2R 5396499 5396565 24 287 42.0 55.0 48.5 0.5 354 chr2R 5396211 intergenic not near genes chr2R 5396388 intergenic not near genes chr2R 5396565 intergenic not near genes chr2R_24_5395001 chr2R_5395001 RAL-301_125b 1385 chr2R 5417949 5418019 chr2R 5420631 5420701 Burdock 18 2682 4.0 7.0 5.5 2.8 2752 chr2R 5417949 intron laccase2 + chr2R 5419325 intron laccase2 + chr2R 5420701 intron laccase2 + chr2R_18_5415001 chr2R_5415001 RAL-301_125b 1386 chr2R 5460500 5460551 chr2R 5460634 5460705 14 148 12.5 16.5 14.5 0.9 205 chr2R 5460500 intergenic not near genes chr2R 5460602 intergenic not near genes chr2R 5460705 intergenic not near genes chr2R_14_5460001 chr2R_5460001 RAL-301_125b 1387 chr2R 5472330 5472385 chr2R 5472483 5472538 7 150 31.5 27.0 29.2 0.2 208 chr2R 5472330 intron CG30440 - chr2R 5472434 intron CG30440 - chr2R 5472538 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-301_125b 1388 chr2R 5491617 5491686 chr2R 5491760 5491829 16 143 20.5 21.5 21.0 0.7 212 chr2R 5491617 intron CG30440 - chr2R 5491723 intron CG30440 - chr2R 5491829 intron CG30440 - chr2R_16_5490001 chr2R_5490001 RAL-301_125b 1389 chr2R 5505321 5505377 chr2R 5505451 5505507 9 130 18.5 11.0 14.8 0.6 186 chr2R 5505321 intron,intron CG30438 +,TpnC4 - chr2R 5505414 intron,intron CG30438 +,TpnC4 - chr2R 5505507 intron,intron CG30438 +,TpnC4 - chr2R_9_5505001 chr2R_5505001 RAL-301_125b 1390 chr2R 5541891 5541950 chr2R 5542174 5542233 8 283 11.0 29.5 20.2 0.4 342 chr2R 5541891 intron CG30438 + chr2R 5542062 intron CG30438 + chr2R 5542233 intron CG30438 + chr2R_8_5540001 chr2R_5540001 RAL-301_125b 1391 chr2R 5543208 5543213 chr2R 5547342 5547347 invader1 5 4134 0.0 20.0 10.0 0.5 4139 chr2R 5543208 intron CG30438 + chr2R 5545278 intron CG30438 + chr2R 5547347 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-301_125b 1392 chr2R 5581398 5581412 chr2R 5627647 5627671 7 46257 27.5 25.0 26.2 0.3 46273 chr2R 5581398 intergenic not near genes chr2R 5604534 intron Fis1 - chr2R 5627671 intergenic not near genes chr2R_7_5600001 chr2R_5600001 RAL-301_125b 1393 chr2R 5621328 5621402 chr2R 5621458 5621532 9 129 37.0 36.0 36.5 0.2 204 chr2R 5621328 intergenic not near genes chr2R 5621430 intergenic not near genes chr2R 5621532 intergenic not near genes chr2R_9_5620001 chr2R_5620001 RAL-301_125b 1394 chr2R 5581558 5581571 chr2R 5627640 5627653 7 46083 26.5 23.0 24.8 0.3 46095 chr2R 5581558 intergenic not near genes chr2R 5604606 exon Fis1 - chr2R 5627653 intergenic not near genes chr2R_7_5600001 chr2R_5600001 RAL-301_125b 1395 chr2R 5664255 5664314 chr2R 5664400 5664459 10 142 15.5 20.5 18.0 0.5 204 chr2R 5664255 5` UTR CR45472 + chr2R 5664357 intron CR45472 + chr2R 5664459 intron CR45472 + chr2R_10_5660001 chr2R_5660001 RAL-301_125b 1396 chr2R 5678718 5678732 chr2R 5679095 5679109 INE-1 5 377 10.0 20.0 15.0 0.3 391 chr2R 5678718 intron scaf - chr2R 5678914 intron scaf - chr2R 5679109 intron scaf - chr2R_5_5675001 chr2R_5675001 RAL-301_125b 1397 chr2R 5693450 5693514 chr2R 5693588 5693653 9 139 22.5 19.0 20.8 0.4 203 chr2R 5693450 intergenic not near genes chr2R 5693552 intergenic not near genes chr2R 5693653 intergenic not near genes chr2R_9_5690001 chr2R_5690001 RAL-301_125b 1398 chr2R 5710610 5710679 chr2R 5710737 5710806 31 126 8.0 11.5 9.8 2.9 196 chr2R 5710610 intron ap - chr2R 5710708 intron ap - chr2R 5710806 intron ap - chr2R_31_5710001 chr2R_5710001 RAL-301_125b 1399 chr2R 5750401 5750451 chr2R 5750543 5750593 23 142 15.5 8.0 11.8 1.8 192 chr2R 5750401 intergenic not near genes chr2R 5750497 intergenic not near genes chr2R 5750593 intergenic not near genes chr2R_23_5750001 chr2R_5750001 RAL-301_125b 1400 chr2R 5772481 5772549 chr2R 5772625 5772693 8 144 22.0 24.5 23.2 0.3 212 chr2R 5772481 3` UTR Gp210 + chr2R 5772587 3` UTR Gp210 + chr2R 5772693 3` UTR Gp210 + chr2R_8_5770001 chr2R_5770001 RAL-301_125b 1401 chr2R 5772788 5772857 chr2R 5772920 5772991 11 133 27.5 26.5 27.0 0.4 203 chr2R 5772788 3` UTR Gp210 + chr2R 5772890 3` UTR Gp210 + chr2R 5772991 3` UTR Gp210 + chr2R_11_5770001 chr2R_5770001 RAL-301_125b 1402 chr2R 5773214 5773253 chr2R 5773365 5773406 5 153 32.5 29.5 31.0 0.2 192 chr2R 5773214 3` UTR Gp210 + chr2R 5773310 3` UTR Gp210 + chr2R 5773406 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-301_125b 1403 chr2R 5790423 5790488 chr2R 5790558 5790623 16 134 20.5 23.5 22.0 0.7 200 chr2R 5790423 intergenic not near genes chr2R 5790523 intergenic not near genes chr2R 5790623 intergenic not near genes chr2R_16_5790001 chr2R_5790001 RAL-301_125b 1404 chr2R 5812127 5812170 chr2R 5812246 5812297 6 122 20.5 19.5 20.0 0.3 170 chr2R 5812127 intron dpr12 + chr2R 5812212 intron dpr12 + chr2R 5812297 intron dpr12 + chr2R_6_5810001 chr2R_5810001 RAL-301_125b 1405 chr2R 5859940 5859980 chr2R 5860102 5860122 9 159 21.5 14.5 18.0 0.5 182 chr2R 5859940 3` UTR dpr12 + chr2R 5860031 3` UTR dpr12 + chr2R 5860122 3` UTR dpr12 + chr2R_9_5860001 chr2R_5860001 RAL-301_125b 1406 chr2R 5869231 5869299 chr2R 5874357 5874425 flea 31 5126 10.0 9.5 9.8 2.9 5194 chr2R 5869231 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874425 intergenic not near genes chr2R_31_5870001 chr2R_5870001 RAL-301_125b 1407 chr2R 5878889 5878952 chr2R 5879019 5879082 24 130 5.5 6.0 5.8 3.5 193 chr2R 5878889 intergenic CG44438 - chr2R 5878986 intergenic CG44438 - chr2R 5879082 intergenic CG44438 - chr2R_24_5875001 chr2R_5875001 RAL-301_125b 1408 chr2R 5885316 5885376 chr2R 5885495 5885555 14 179 11.5 8.0 9.8 1.3 239 chr2R 5885316 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885555 5` UTR CR44125 + chr2R_14_5885001 chr2R_5885001 RAL-301_125b 1409 chr2R 5902105 5902185 chr2R 5909714 5909794 17.6 21 7608 4.5 7.5 6.0 3.0 7689 chr2R 5902105 5` UTR CG43366 + chr2R 5905950 intron CG43366 + chr2R 5909794 intron CG43366 + chr2R_21_5905001 chr2R_5905001 RAL-301_125b 1410 chr2R 5939631 5939663 chr2R 5940871 5940910 INE-1 5 1246 28.5 35.0 31.8 0.2 1279 chr2R 5939631 intergenic not near genes chr2R 5940270 intergenic not near genes chr2R 5940910 intergenic not near genes chr2R_5_5940001 chr2R_5940001 RAL-301_125b 1411 chr2R 5951165 5951179 chr2R 5951298 5951314 5 134 18.0 22.5 20.2 0.2 149 chr2R 5951165 intergenic not near genes chr2R 5951240 intergenic not near genes chr2R 5951314 intergenic not near genes chr2R_5_5950001 chr2R_5950001 RAL-301_125b 1412 chr2R 5964908 5964952 chr2R 5965036 5965080 5 128 26.5 19.5 23.0 0.2 172 chr2R 5964908 intron CG7881 - chr2R 5964994 intron CG7881 - chr2R 5965080 intron CG7881 - chr2R_5_5960001 chr2R_5960001 RAL-301_125b 1413 chr2R 6075024 6075089 chr2R 6075151 6075216 16 125 15.5 15.5 15.5 1.0 192 chr2R 6075024 intron CG7845 - chr2R 6075120 exon CG7845 - chr2R 6075216 exon CG7845 - chr2R_16_6075001 chr2R_6075001 RAL-301_125b 1414 chr2R 6096674 6096696 chr2R 6101921 6101944 BS 6 5247 22.0 9.5 15.8 0.4 5270 chr2R 6096674 intron EcR - chr2R 6099309 intron EcR - chr2R 6101944 intron EcR - chr2R_6_6095001 chr2R_6095001 RAL-301_125b 1415 chr2R 6096702 6096723 chr2R 6101919 6101965 BS 10 5243 16.5 8.5 12.5 0.7 5263 chr2R 6096702 intron EcR - chr2R 6099334 intron EcR - chr2R 6101965 intron EcR - chr2R_10_6095001 chr2R_6095001 RAL-301_125b 1416 chr2R 6096728 6096736 chr2R 6101915 6101983 BS 7 5231 13.0 7.5 10.2 0.6 5255 chr2R 6096728 intron EcR - chr2R 6099356 intron EcR - chr2R 6101983 intron EcR - chr2R_7_6095001 chr2R_6095001 RAL-301_125b 1417 chr2R 6129282 6129338 chr2R 6129410 6129466 23 128 23.5 23.0 23.2 1.0 184 chr2R 6129282 intron EcR - chr2R 6129374 intron EcR - chr2R 6129466 intron EcR - chr2R_23_6125001 chr2R_6125001 RAL-301_125b 1418 chr2R 6129339 6129353 chr2R 6129407 6129422 6 108 25.5 22.5 24.0 0.2 83 chr2R 6129339 intron EcR - chr2R 6129380 intron EcR - chr2R 6129422 intron EcR - chr2R_6_6125001 chr2R_6125001 RAL-301_125b 1419 chr2R 6151469 6151495 chr2R 6151595 6151621 11 126 24.0 22.5 23.2 0.5 152 chr2R 6151469 intron EcR - chr2R 6151545 intron EcR - chr2R 6151621 intron EcR - chr2R_11_6150001 chr2R_6150001 RAL-301_125b 1420 chr2R 6169272 6169287 chr2R 6169450 6169465 6 178 24.5 27.5 26.0 0.2 193 chr2R 6169272 intergenic EcR - chr2R 6169368 intergenic EcR - chr2R 6169465 intergenic EcR - chr2R_6_6165001 chr2R_6165001 RAL-301_125b 1421 chr2R 6178079 6178145 chr2R 6178255 6178321 22 176 13.0 9.5 11.2 1.8 242 chr2R 6178079 intergenic not near genes chr2R 6178200 intergenic not near genes chr2R 6178321 intergenic not near genes chr2R_22_6175001 chr2R_6175001 RAL-301_125b 1422 chr2R 6178639 6178708 chr2R 6178776 6178845 19 137 16.5 22.0 19.2 0.9 206 chr2R 6178639 intergenic not near genes chr2R 6178742 intergenic not near genes chr2R 6178845 intergenic not near genes chr2R_19_6175001 chr2R_6175001 RAL-301_125b 1423 chr2R 6247761 6247837 chr2R 6247889 6247940 27 127 11.0 6.5 8.8 2.8 179 chr2R 6247761 intron Pld + chr2R 6247850 intron Pld + chr2R 6247940 intron Pld + chr2R_27_6245001 chr2R_6245001 RAL-301_125b 1424 chr2R 6494486 6494547 chr2R 6499298 6499359 F-element 18 4809 7.0 10.0 8.5 1.9 4873 chr2R 6494486 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499359 intergenic not near genes chr2R_18_6495001 chr2R_6495001 RAL-301_125b 1425 chr2R 6499782 6499828 chr2R 6500000 6500046 14 218 22.5 16.0 19.2 0.7 264 chr2R 6499782 intergenic not near genes chr2R 6499914 intergenic not near genes chr2R 6500046 intergenic not near genes chr2R_14_6495001 chr2R_6495001 RAL-301_125b 1426 chr2R 6500919 6500989 chr2R 6501064 6501108 22 140 19.0 23.5 21.2 1.0 189 chr2R 6500919 intergenic not near genes chr2R 6501014 intergenic not near genes chr2R 6501108 intergenic not near genes chr2R_22_6500001 chr2R_6500001 RAL-301_125b 1427 chr2R 6530732 6530794 chr2R 6530847 6530924 20 129 18.5 15.0 16.8 1.1 192 chr2R 6530732 intron jing + chr2R 6530828 intron jing + chr2R 6530924 intron jing + chr2R_20_6530001 chr2R_6530001 RAL-301_125b 1428 chr2R 6547907 6547958 chr2R 6548110 6548171 9 212 30.5 30.0 30.2 0.3 264 chr2R 6547907 intron jing + chr2R 6548039 intron jing + chr2R 6548171 intron jing + chr2R_9_6545001 chr2R_6545001 RAL-301_125b 1429 chr2R 6579733 6579802 chr2R 6584869 6584938 flea 32 5136 10.0 10.0 10.0 2.9 5205 chr2R 6579733 intron jing + chr2R 6582336 intron jing + chr2R 6584938 intron jing + chr2R_32_6580001 chr2R_6580001 RAL-301_125b 1430 chr2R 6622098 6622164 chr2R 6622619 6622686 invader1 26 522 22.0 14.0 18.0 1.4 588 chr2R 6622098 intergenic not near genes chr2R 6622392 intergenic not near genes chr2R 6622686 intergenic not near genes chr2R_26_6620001 chr2R_6620001 RAL-301_125b 1431 chr2R 6633152 6633222 chr2R 6633279 6633349 17 126 13.0 19.0 16.0 1.0 197 chr2R 6633152 intergenic Vha16-1 -,Trap1 - chr2R 6633250 intergenic Vha16-1 -,Trap1 - chr2R 6633349 intergenic Vha16-1 -,Trap1 - chr2R_17_6630001 chr2R_6630001 RAL-301_125b 1432 chr2R 6691086 6691140 chr2R 6691215 6691269 6 129 32.5 35.5 34.0 0.2 183 chr2R 6691086 intron CG9422 + chr2R 6691178 intron CG9422 + chr2R 6691269 intron CG9422 + chr2R_6_6690001 chr2R_6690001 RAL-301_125b 1433 chr2R 6696565 6696629 chr2R 6696698 6696762 11 132 26.5 31.0 28.8 0.4 197 chr2R 6696565 5` UTR Mob4 - chr2R 6696664 intergenic Mob4 -,Rab2 + chr2R 6696762 5` UTR Rab2 + chr2R_11_6695001 chr2R_6695001 RAL-301_125b 1434 chr2R 6699587 6699594 chr2R 6699722 6699729 4 135 26.0 24.5 25.2 0.2 142 chr2R 6699587 intergenic Rab2 + chr2R 6699658 intergenic Rab2 + chr2R 6699729 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_4_6695001 chr2R_6695001 RAL-301_125b 1435 chr2R 6711076 6711142 chr2R 6711223 6711289 22 145 23.5 19.0 21.2 1.0 213 chr2R 6711076 intron,intron CG3409 -,CG45092 - chr2R 6711182 intron,intron CG3409 -,CG45092 - chr2R 6711289 intron,intron CG3409 -,CG45092 - chr2R_22_6710001 chr2R_6710001 RAL-301_125b 1436 chr2R 6712542 6712592 chr2R 6712689 6712739 10 146 27.0 20.0 23.5 0.4 197 chr2R 6712542 intron,intron CG3409 -,CG45092 - chr2R 6712640 intron,intron CG3409 -,CG45092 - chr2R 6712739 intron,intron CG3409 -,CG45092 - chr2R_10_6710001 chr2R_6710001 RAL-301_125b 1437 chr2R 6753560 6753600 chr2R 6753687 6753727 14 126 30.0 23.5 26.8 0.5 167 chr2R 6753560 intron Eb1 + chr2R 6753644 intron Eb1 + chr2R 6753727 intron Eb1 + chr2R_14_6750001 chr2R_6750001 RAL-301_125b 1438 chr2R 6846259 6846324 chr2R 6846386 6846446 23 127 16.0 15.5 15.8 1.4 187 chr2R 6846259 intergenic not near genes chr2R 6846352 intergenic not near genes chr2R 6846446 intergenic not near genes chr2R_23_6845001 chr2R_6845001 RAL-301_125b 1439 chr2R 6895359 6895384 chr2R 6895488 6895513 8 128 23.5 21.0 22.2 0.3 154 chr2R 6895359 intron CG30158 + chr2R 6895436 intron CG30158 + chr2R 6895513 intron CG30158 + chr2R_8_6895001 chr2R_6895001 RAL-301_125b 1440 chr2R 6895392 6895431 chr2R 6895482 6895524 16 119 18.0 19.5 18.8 0.8 132 chr2R 6895392 intron CG30158 + chr2R 6895458 intron CG30158 + chr2R 6895524 intron CG30158 + chr2R_16_6895001 chr2R_6895001 RAL-301_125b 1441 chr2R 6952132 6952182 chr2R 6959763 6959812 opus 8 7630 11.0 8.5 9.8 0.7 7680 chr2R 6952132 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955972 intron,intron mim -,CheB42c - chr2R 6959812 intron,intron mim -,CheB42c - chr2R_8_6955001 chr2R_6955001 RAL-301_125b 1442 chr2R 6964239 6964311 chr2R 6964366 6964438 20 127 24.0 19.5 21.8 0.9 199 chr2R 6964239 intron,intron mim -,CheB42c - chr2R 6964338 intron,intron mim -,CheB42c - chr2R 6964438 intron,intron mim -,CheB42c - chr2R_20_6960001 chr2R_6960001 RAL-301_125b 1443 chr2R 6978594 6978835 chr2R 6978827 6979014 41 207 6.0 3.0 4.5 7.5 420 chr2R 6978594 exon vimar - chr2R 6978804 intron vimar - chr2R 6979014 intron vimar - chr2R_41_6975001 chr2R_6975001 RAL-301_125b 1444 chr2R 7091168 7091233 chr2R 7091300 7091365 31 132 23.5 28.0 25.8 1.2 197 chr2R 7091168 intron esn + chr2R 7091266 intron esn + chr2R 7091365 intron esn + chr2R_31_7090001 chr2R_7090001 RAL-301_125b 1445 chr2R 7095922 7095950 chr2R 7096072 7096100 7 149 32.5 25.0 28.8 0.2 178 chr2R 7095922 intron esn + chr2R 7096011 intron esn + chr2R 7096100 intron esn + chr2R_7_7095001 chr2R_7095001 RAL-301_125b 1446 chr2R 7101584 7101639 chr2R 7101719 7101784 24 144 28.0 19.5 23.8 1.0 200 chr2R 7101584 intron esn + chr2R 7101684 intron esn + chr2R 7101784 intron esn + chr2R_24_7100001 chr2R_7100001 RAL-301_125b 1447 chr2R 7129436 7129476 chr2R 7131657 7131682 5 2209 57.5 51.0 54.2 0.1 2246 chr2R 7129436 exon Cyp9b1 - chr2R 7130559 intron Cyp9b2 - chr2R 7131682 exon Cyp9b2 - chr2R_5_7130001 chr2R_7130001 RAL-301_125b 1448 chr2R 7171234 7171277 chr2R 7171370 7171413 10 136 32.5 31.5 32.0 0.3 179 chr2R 7171234 intron pk + chr2R 7171324 intron pk + chr2R 7171413 intron pk + chr2R_10_7170001 chr2R_7170001 RAL-301_125b 1449 chr2R 7196528 7196590 chr2R 7201353 7201416 F-element 29 4825 11.5 19.5 15.5 1.8 4888 chr2R 7196528 intron pk + chr2R 7198972 intron pk + chr2R 7201416 intron pk + chr2R_29_7195001 chr2R_7195001 RAL-301_125b 1450 chr2R 7208272 7208295 chr2R 7208387 7208432 13 132 24.5 32.5 28.5 0.4 160 chr2R 7208272 intron pk + chr2R 7208352 intron pk + chr2R 7208432 intron pk + chr2R_13_7205001 chr2R_7205001 RAL-301_125b 1451 chr2R 7209844 7209868 chr2R 7217642 7217666 roo 7 7800 8.5 14.5 11.5 0.6 7822 chr2R 7209844 intron pk + chr2R 7213755 intron pk + chr2R 7217666 intron pk + chr2R_7_7210001 chr2R_7210001 RAL-301_125b 1452 chr2R 7235775 7235847 chr2R 7240917 7240979 jockey 35 5136 11.0 4.5 7.8 4.0 5204 chr2R 7235775 intergenic not near genes chr2R 7238377 intergenic not near genes chr2R 7240979 intergenic not near genes chr2R_35_7235001 chr2R_7235001 RAL-301_125b 1453 chr2R 7243369 7243424 chr2R 7247740 7247795 8 4371 34.5 34.5 34.5 0.2 4426 chr2R 7243369 3` UTR Ady43A - chr2R 7245582 5` UTR Ady43A - chr2R 7247795 intergenic not near genes chr2R_8_7245001 chr2R_7245001 RAL-301_125b 1454 chr2R 7262160 7262219 chr2R 7269263 7269288 297 17 7107 10.0 21.5 15.8 1.0 7128 chr2R 7262160 intergenic not near genes chr2R 7265724 intergenic not near genes chr2R 7269288 intergenic not near genes chr2R_17_7265001 chr2R_7265001 RAL-301_125b 1455 chr2R 7389524 7389600 chr2R 7389676 7389752 13 150 21.5 28.5 25.0 0.5 228 chr2R 7389524 intron CG11107 + chr2R 7389638 intron CG11107 + chr2R 7389752 intron CG11107 + chr2R_13_7385001 chr2R_7385001 RAL-301_125b 1456 chr2R 7417855 7418153 chr2R 7417991 7418282 32 131 19.0 23.5 21.2 1.4 427 chr2R 7417855 intergenic not near genes chr2R 7418068 intergenic not near genes chr2R 7418282 intergenic not near genes chr2R_32_7415001 chr2R_7415001 RAL-301_125b 1457 chr2R 7434856 7434905 chr2R 7439207 7439256 Juan 23 4351 15.0 16.0 15.5 1.4 4400 chr2R 7434856 3` UTR so + chr2R 7437056 intergenic not near genes chr2R 7439256 intergenic not near genes chr2R_23_7435001 chr2R_7435001 RAL-301_125b 1458 chr2R 7478211 7478281 chr2R 7478405 7478475 22 191 16.5 22.5 19.5 1.1 264 chr2R 7478211 intergenic not near genes chr2R 7478343 intergenic not near genes chr2R 7478475 intergenic wech - chr2R_22_7475001 chr2R_7475001 RAL-301_125b 1459 chr2R 7533897 7533898 chr2R 7536434 7536458 4 2546 35.0 37.5 36.2 0.1 2561 chr2R 7533897 intron Cyt-b5 + chr2R 7535178 intron Cyt-b5 + chr2R 7536458 exon CG2137 + chr2R_4_7535001 chr2R_7535001 RAL-301_125b 1460 chr2R 7533888 7533955 chr2R 7536464 7536483 7 2552 46.5 42.5 44.5 0.2 2595 chr2R 7533888 intron Cyt-b5 + chr2R 7535186 intron Cyt-b5 + chr2R 7536483 exon CG2137 + chr2R_7_7535001 chr2R_7535001 RAL-301_125b 1461 chr2R 7608366 7608416 chr2R 7613619 7613668 I-element 12 5251 13.5 0.0 6.8 1.5 5302 chr2R 7608366 intron CG1358 - chr2R 7611017 intron CG1358 - chr2R 7613668 intron CG1358 - chr2R_12_7610001 chr2R_7610001 RAL-301_125b 1462 chr2R 7615629 7615643 chr2R 7615755 7615769 4 126 25.0 35.5 30.2 0.1 140 chr2R 7615629 intron CG1358 - chr2R 7615699 intron CG1358 - chr2R 7615769 intron CG1358 - chr2R_4_7615001 chr2R_7615001 RAL-301_125b 1463 chr2R 7625076 7625100 chr2R 7625231 7625255 4 155 37.5 31.0 34.2 0.1 179 chr2R 7625076 intron CG43340 + chr2R 7625166 intron CG43340 + chr2R 7625255 intron CG43340 + chr2R_4_7625001 chr2R_7625001 RAL-301_125b 1464 chr2R 7630857 7630910 chr2R 7631333 7631401 7 487 35.0 46.0 40.5 0.2 544 chr2R 7630857 intron CG43340 + chr2R 7631129 intron CG43340 + chr2R 7631401 intron CG43340 + chr2R_7_7630001 chr2R_7630001 RAL-301_125b 1465 chr2R 7642817 7642859 chr2R 7642947 7642989 5 130 29.0 30.5 29.8 0.2 172 chr2R 7642817 intron CG43340 + chr2R 7642903 intron CG43340 + chr2R 7642989 intron CG43340 + chr2R_5_7640001 chr2R_7640001 RAL-301_125b 1466 chr2R 7691970 7692038 chr2R 7692094 7692169 23 131 17.0 19.0 18.0 1.2 199 chr2R 7691970 intron CG1399 - chr2R 7692070 intron CG1399 - chr2R 7692169 intron CG1399 - chr2R_23_7690001 chr2R_7690001 RAL-301_125b 1467 chr2R 7714044 7714088 chr2R 7714170 7714221 14 128 28.5 23.0 25.8 0.5 177 chr2R 7714044 exon CG1942 + chr2R 7714132 3` UTR CG1942 + chr2R 7714221 intergenic CG1942 + chr2R_14_7710001 chr2R_7710001 RAL-301_125b 1468 chr2R 7714089 7714115 chr2R 7714157 7714248 17 129 25.5 24.0 24.8 0.7 159 chr2R 7714089 exon CG1942 + chr2R 7714168 3` UTR CG1942 + chr2R 7714248 intergenic CG1942 + chr2R_17_7710001 chr2R_7710001 RAL-301_125b 1469 chr2R 7815629 7815692 chr2R 7822148 7822211 Burdock 39 6519 8.5 8.0 8.2 4.2 6582 chr2R 7815629 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822211 3` UTR cathD - chr2R_39_7815001 chr2R_7815001 RAL-301_125b 1470 chr2R 7851219 7851286 chr2R 7851355 7851401 9 133 26.0 23.0 24.5 0.4 182 chr2R 7851219 intron Dgk - chr2R 7851310 intron Dgk - chr2R 7851401 intron Dgk - chr2R_9_7850001 chr2R_7850001 RAL-301_125b 1471 chr2R 7862235 7862250 chr2R 7867370 7867387 flea 8 5135 17.0 15.5 16.2 0.5 5152 chr2R 7862235 intron Dgk - chr2R 7864811 intron Dgk - chr2R 7867387 intron Dgk - chr2R_8_7860001 chr2R_7860001 RAL-301_125b 1472 chr2R 7869146 7869211 chr2R 7873982 7874048 Doc 21 4836 8.0 10.0 9.0 2.1 4902 chr2R 7869146 intron Dgk - chr2R 7871597 intron Dgk - chr2R 7874048 intron Dgk - chr2R_21_7870001 chr2R_7870001 RAL-301_125b 1473 chr2R 7910647 7910693 chr2R 7912352 7912398 10 1703 23.0 21.0 22.0 0.4 1751 chr2R 7910647 intron CG30377 + chr2R 7911522 intron CG30377 + chr2R 7912398 intron CG30377 + chr2R_10_7910001 chr2R_7910001 RAL-301_125b 1474 chr2R 7910696 7910700 chr2R 7912349 7912405 5 1695 21.0 19.5 20.2 0.2 1709 chr2R 7910696 intron CG30377 + chr2R 7911550 intron CG30377 + chr2R 7912405 intron CG30377 + chr2R_5_7910001 chr2R_7910001 RAL-301_125b 1475 chr2R 7915667 7915744 chr2R 7915809 7915886 23 141 18.0 17.5 17.8 1.2 219 chr2R 7915667 intron CG12159 - chr2R 7915776 intron CG12159 - chr2R 7915886 intron CG12159 - chr2R_23_7915001 chr2R_7915001 RAL-301_125b 1476 chr2R 7952092 7952166 chr2R 7952415 7952485 14 320 27.5 29.0 28.2 0.5 393 chr2R 7952092 intron CG14764 - chr2R 7952288 intron CG14764 - chr2R 7952485 intron CG14764 - chr2R_14_7950001 chr2R_7950001 RAL-301_125b 1477 chr2R 7956038 7956105 chr2R 7956164 7956231 14 126 29.0 29.5 29.2 0.5 193 chr2R 7956038 intergenic CG2906 +,CG14764 - chr2R 7956134 intergenic CG2906 +,CG14764 - chr2R 7956231 exon CG2906 + chr2R_14_7955001 chr2R_7955001 RAL-301_125b 1478 chr2R 7996969 7997023 chr2R 7997107 7997161 8 136 30.0 28.0 29.0 0.3 192 chr2R 7996969 intron Hey - chr2R 7997065 intron Hey - chr2R 7997161 intron Hey - chr2R_8_7995001 chr2R_7995001 RAL-301_125b 1479 chr2R 7999580 7999589 chr2R 7999713 7999722 6 133 12.0 20.0 16.0 0.4 142 chr2R 7999580 intergenic not near genes chr2R 7999651 intergenic not near genes chr2R 7999722 intergenic not near genes chr2R_6_7995001 chr2R_7995001 RAL-301_125b 1480 chr2R 8015623 8015674 chr2R 8017681 8017747 14 2066 13.0 5.5 9.2 1.4 2124 chr2R 8015623 intergenic mir-4981 + chr2R 8016685 intergenic not near genes chr2R 8017747 intergenic not near genes chr2R_14_8015001 chr2R_8015001 RAL-301_125b 1481 chr2R 8018076 8018144 chr2R 8018219 8018287 14 143 18.5 23.0 20.8 0.6 211 chr2R 8018076 intergenic not near genes chr2R 8018182 intergenic not near genes chr2R 8018287 intergenic not near genes chr2R_14_8015001 chr2R_8015001 RAL-301_125b 1482 chr2R 8026760 8026833 chr2R 8026886 8026959 44 126 10.5 11.5 11.0 3.7 199 chr2R 8026760 intergenic CR45267 + chr2R 8026860 intergenic CR45267 + chr2R 8026959 intergenic CR45267 + chr2R_44_8025001 chr2R_8025001 RAL-301_125b 1483 chr2R 8049548 8049599 chr2R 8049730 8049781 16 182 25.5 32.0 28.8 0.5 233 chr2R 8049548 intergenic not near genes chr2R 8049664 intergenic not near genes chr2R 8049781 intergenic not near genes chr2R_16_8045001 chr2R_8045001 RAL-301_125b 1484 chr2R 8067016 8067098 chr2R 8067150 8067187 20 132 19.5 21.5 20.5 0.9 171 chr2R 8067016 intron CG17977 - chr2R 8067102 intron CG17977 - chr2R 8067187 exon CG17977 - chr2R_20_8065001 chr2R_8065001 RAL-301_125b 1485 chr2R 8076634 8076707 chr2R 8076764 8076837 28 129 28.0 23.5 25.8 1.0 203 chr2R 8076634 intron lig + chr2R 8076736 intron lig + chr2R 8076837 intron lig + chr2R_28_8075001 chr2R_8075001 RAL-301_125b 1486 chr2R 8089207 8089280 chr2R 8089343 8089416 35 136 7.5 10.0 8.8 3.6 209 chr2R 8089207 exon sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089416 intergenic sut3 +,sut2 + chr2R_35_8085001 chr2R_8085001 RAL-301_125b 1487 chr2R 8113992 8114052 chr2R 8114120 8114191 15 138 3.5 10.5 7.0 1.9 199 chr2R 8113992 intergenic Asap - chr2R 8114092 intergenic Asap - chr2R 8114191 intergenic Asap - chr2R_15_8110001 chr2R_8110001 RAL-301_125b 1488 chr2R 8157857 8157868 chr2R 8157995 8158006 5 138 26.0 32.0 29.0 0.2 149 chr2R 8157857 5` UTR CR44068 + chr2R 8157932 5` UTR CR44068 + chr2R 8158006 5` UTR CR44068 + chr2R_5_8155001 chr2R_8155001 RAL-301_125b 1489 chr2R 8157869 8157904 chr2R 8157991 8158042 12 135 19.5 30.5 25.0 0.5 173 chr2R 8157869 5` UTR CR44068 + chr2R 8157956 5` UTR CR44068 + chr2R 8158042 5` UTR CR44068 + chr2R_12_8155001 chr2R_8155001 RAL-301_125b 1490 chr2R 8160885 8160937 chr2R 8161025 8161077 1360 14 136 34.5 34.5 34.5 0.4 192 chr2R 8160885 exon CG8708 - chr2R 8160981 intron CG8708 - chr2R 8161077 intron CG8708 - chr2R_14_8160001 chr2R_8160001 RAL-301_125b 1491 chr2R 8235989 8236029 chr2R 8236120 8236159 16 130 16.5 6.5 11.5 1.3 170 chr2R 8235989 intergenic not near genes chr2R 8236074 intergenic not near genes chr2R 8236159 intergenic not near genes chr2R_16_8235001 chr2R_8235001 RAL-301_125b 1492 chr2R 8277590 8277668 chr2R 8277735 8277778 29 138 6.0 8.0 7.0 3.6 188 chr2R 8277590 5` UTR CR44280 + chr2R 8277684 5` UTR CR44280 + chr2R 8277778 5` UTR CR44280 + chr2R_29_8275001 chr2R_8275001 RAL-301_125b 1493 chr2R 8308641 8308715 chr2R 8308772 8308842 37 131 3.0 7.0 5.0 6.2 201 chr2R 8308641 intergenic not near genes chr2R 8308742 intergenic not near genes chr2R 8308842 intergenic not near genes chr2R_37_8305001 chr2R_8305001 RAL-301_125b 1494 chr2R 8330822 8330860 chr2R 8331358 8331396 roo 18 535 14.5 9.5 12.0 1.4 574 chr2R 8330822 intron pdm3 + chr2R 8331109 intron pdm3 + chr2R 8331396 intron pdm3 + chr2R_18_8330001 chr2R_8330001 RAL-301_125b 1495 chr2R 8330861 8330883 chr2R 8331347 8331419 roo 12 532 10.5 7.5 9.0 1.2 558 chr2R 8330861 intron pdm3 + chr2R 8331140 intron pdm3 + chr2R 8331419 intron pdm3 + chr2R_12_8330001 chr2R_8330001 RAL-301_125b 1496 chr2R 8338604 8338668 chr2R 8338736 8338800 26 131 0.0 9.0 4.5 4.7 196 chr2R 8338604 intron pdm3 + chr2R 8338702 intron pdm3 + chr2R 8338800 intron pdm3 + chr2R_26_8335001 chr2R_8335001 RAL-301_125b 1497 chr2R 8345218 8345238 chr2R 8345345 8345351 11 124 24.5 16.0 20.2 0.5 133 chr2R 8345218 intron pdm3 + chr2R 8345284 intron pdm3 + chr2R 8345351 intron pdm3 + chr2R_11_8345001 chr2R_8345001 RAL-301_125b 1498 chr2R 8345242 8345297 chr2R 8345343 8345395 21 106 12.5 15.5 14.0 1.4 153 chr2R 8345242 intron pdm3 + chr2R 8345318 intron pdm3 + chr2R 8345395 intron pdm3 + chr2R_21_8345001 chr2R_8345001 RAL-301_125b 1499 chr2R 8398168 8398235 chr2R 8402999 8403066 Doc 28 4828 8.5 10.5 9.5 2.7 4898 chr2R 8398168 intron CG2121 - chr2R 8400617 intron CG2121 - chr2R 8403066 intron CG2121 - chr2R_28_8400001 chr2R_8400001 RAL-301_125b 1500 chr2R 8408787 8408866 chr2R 8408965 8409021 20 164 13.0 12.5 12.8 1.4 234 chr2R 8408787 intron CG2121 - chr2R 8408904 intron CG2121 - chr2R 8409021 intron CG2121 - chr2R_20_8405001 chr2R_8405001 RAL-301_125b 1501 chr2R 8416269 8416284 chr2R 8417142 8417158 I-element 9 873 20.5 15.5 18.0 0.5 889 chr2R 8416269 intergenic not near genes chr2R 8416714 intergenic CG43296 - chr2R 8417158 intergenic CG43296 - chr2R_9_8415001 chr2R_8415001 RAL-301_125b 1502 chr2R 8483940 8483987 chr2R 8484066 8484113 5 122 13.0 7.5 10.2 0.4 173 chr2R 8483940 intron mtt - chr2R 8484026 intron mtt - chr2R 8484113 intron mtt - chr2R_5_8480001 chr2R_8480001 RAL-301_125b 1503 chr2R 8489945 8489964 chr2R 8490081 8490100 9 136 1.0 13.5 7.2 1.1 155 chr2R 8489945 intron mtt - chr2R 8490022 intron mtt - chr2R 8490100 intron mtt - chr2R_9_8490001 chr2R_8490001 RAL-301_125b 1504 chr2R 8490565 8490577 chr2R 8492340 8492352 Rt1c 6 1775 15.0 24.5 19.8 0.3 1787 chr2R 8490565 intron mtt - chr2R 8491458 intron mtt - chr2R 8492352 intron mtt - chr2R_6_8490001 chr2R_8490001 RAL-301_125b 1505 chr2R 8566010 8566058 chr2R 8567006 8567054 1360 18 996 7.0 11.0 9.0 1.8 1044 chr2R 8566010 5` UTR Cyp6a14 - chr2R 8566532 5` UTR Cyp6a14 - chr2R 8567054 5` UTR Cyp6a14 - chr2R_18_8565001 chr2R_8565001 RAL-301_125b 1506 chr2R 8612534 8612609 chr2R 8612661 8612736 29 127 13.5 9.5 11.5 2.3 202 chr2R 8612534 intron CG8642 - chr2R 8612635 intron CG8642 - chr2R 8612736 intron CG8642 - chr2R_29_8610001 chr2R_8610001 RAL-301_125b 1507 chr2R 8633053 8633127 chr2R 8633442 8633516 35 389 10.5 10.5 10.5 3.0 463 chr2R 8633053 intergenic not near genes chr2R 8633284 intergenic not near genes chr2R 8633516 intergenic not near genes chr2R_35_8630001 chr2R_8630001 RAL-301_125b 1508 chr2R 8635925 8635934 chr2R 8636053 8636062 7 128 0.0 17.0 8.5 0.7 137 chr2R 8635925 intergenic not near genes chr2R 8635994 intergenic not near genes chr2R 8636062 intergenic not near genes chr2R_7_8635001 chr2R_8635001 RAL-301_125b 1509 chr2R 8658215 8658224 chr2R 8658321 8658350 5 117 0.5 14.0 7.2 0.6 135 chr2R 8658215 intron ptc + chr2R 8658282 intron ptc + chr2R 8658350 intron ptc + chr2R_5_8655001 chr2R_8655001 RAL-301_125b 1510 chr2R 8658225 8658233 chr2R 8658311 8658354 4 108 0.5 11.5 6.0 0.6 129 chr2R 8658225 intron ptc + chr2R 8658290 intron ptc + chr2R 8658354 intron ptc + chr2R_4_8655001 chr2R_8655001 RAL-301_125b 1511 chr2R 8658235 8658264 chr2R 8658310 8658328 7 98 8.0 12.0 10.0 0.6 93 chr2R 8658235 intron ptc + chr2R 8658282 intron ptc + chr2R 8658328 intron ptc + chr2R_7_8655001 chr2R_8655001 RAL-301_125b 1512 chr2R 8722720 8722785 chr2R 8723010 8723062 pogo 28 285 12.0 9.0 10.5 2.4 342 chr2R 8722720 intron CG14767 - chr2R 8722891 intron CG14767 - chr2R 8723062 intron CG14767 - chr2R_28_8720001 chr2R_8720001 RAL-301_125b 1513 chr2R 8747958 8748015 chr2R 8748087 8748139 24 128 9.5 11.5 10.5 2.1 181 chr2R 8747958 intron CG8740 + chr2R 8748048 intron CG8740 + chr2R 8748139 intron CG8740 + chr2R_24_8745001 chr2R_8745001 RAL-301_125b 1514 chr2R 8777873 8777942 chr2R 8784127 8784194 diver 16 6254 6.0 9.0 7.5 1.9 6321 chr2R 8777873 intergenic not near genes chr2R 8781034 intergenic not near genes chr2R 8784194 intergenic not near genes chr2R_16_8780001 chr2R_8780001 RAL-301_125b 1515 chr2R 8833385 8833451 chr2R 8833507 8833576 33 130 7.5 8.0 7.8 3.7 191 chr2R 8833385 intron sns + chr2R 8833480 intron sns + chr2R 8833576 intron sns + chr2R_33_8830001 chr2R_8830001 RAL-301_125b 1516 chr2R 9110098 9110167 chr2R 9110237 9110306 27 138 8.0 6.5 7.2 3.3 208 chr2R 9110098 intergenic Pmm45A - chr2R 9110202 intergenic Pmm45A - chr2R 9110306 intergenic tsu + chr2R_27_9110001 chr2R_9110001 RAL-301_125b 1517 chr2R 9151258 9151265 chr2R 9157778 9157785 Burdock 7 6520 29.0 12.5 20.8 0.3 6527 chr2R 9151258 exon CG30345 + chr2R 9154522 intergenic not near genes chr2R 9157785 intergenic CG8008 - chr2R_7_9150001 chr2R_9150001 RAL-301_125b 1518 chr2R 9151266 9151286 chr2R 9157776 9157806 Burdock 10 6518 23.5 11.5 17.5 0.5 6540 chr2R 9151266 exon CG30345 + chr2R 9154536 intergenic not near genes chr2R 9157806 intergenic CG8008 - chr2R_10_9150001 chr2R_9150001 RAL-301_125b 1519 chr2R 9151289 9151324 chr2R 9157773 9157843 Burdock 17 6518 14.0 11.0 12.5 1.3 6554 chr2R 9151289 exon CG30345 + chr2R 9154566 intergenic not near genes chr2R 9157843 intergenic CG8008 - chr2R_17_9150001 chr2R_9150001 RAL-301_125b 1520 chr2R 9212652 9212712 chr2R 9213188 9213228 roo 15 531 9.0 9.5 9.2 1.5 576 chr2R 9212652 intergenic CR45309 + chr2R 9212940 intergenic CR45309 + chr2R 9213228 5` UTR CR45309 + chr2R_15_9210001 chr2R_9210001 RAL-301_125b 1521 chr2R 9236467 9236518 chr2R 9237290 9237335 26 822 12.5 6.0 9.2 2.5 868 chr2R 9236467 intron hig - chr2R 9236901 intron hig - chr2R 9237335 intron hig - chr2R_26_9235001 chr2R_9235001 RAL-301_125b 1522 chr2R 9236529 9236530 chr2R 10336133 10336134 4 1099604 10.5 30.5 20.5 0.2 1099605 chr2R 9236529 intron hig - chr2R 9786332 intron CG1688 - chr2R 10336134 intron CG42732 - chr2R_4_9785001 chr2R_9785001 RAL-301_125b 1523 chr2R 9267933 9268006 chr2R 9268069 9268127 29 135 7.5 9.0 8.2 3.2 194 chr2R 9267933 exon Pkn - chr2R 9268030 intron Pkn - chr2R 9268127 intron Pkn - chr2R_29_9265001 chr2R_9265001 RAL-301_125b 1524 chr2R 9270995 9271058 chr2R 9271122 9271185 18 127 0.5 12.5 6.5 2.4 190 chr2R 9270995 intron Pkn - chr2R 9271090 intron Pkn - chr2R 9271185 intron Pkn - chr2R_18_9270001 chr2R_9270001 RAL-301_125b 1525 chr2R 9368076 9368093 chr2R 9368202 9368219 4 126 21.0 1.5 11.2 0.3 143 chr2R 9368076 intron CG13954 - chr2R 9368148 intron CG13954 - chr2R 9368219 intron CG13954 - chr2R_4_9365001 chr2R_9365001 RAL-301_125b 1526 chr2R 9368098 9368140 chr2R 9368201 9368222 12 108 9.5 1.5 5.5 1.8 124 chr2R 9368098 intron CG13954 - chr2R 9368160 intron CG13954 - chr2R 9368222 intron CG13954 - chr2R_12_9365001 chr2R_9365001 RAL-301_125b 1527 chr2R 9451224 9451240 chr2R 9451356 9451361 4 129 13.5 9.0 11.2 0.3 137 chr2R 9451224 intron Camta + chr2R 9451292 intron Camta + chr2R 9451361 intron Camta + chr2R_4_9450001 chr2R_9450001 RAL-301_125b 1528 chr2R 9451241 9451293 chr2R 9451348 9451425 25 126 5.5 7.0 6.2 3.5 184 chr2R 9451241 intron Camta + chr2R 9451333 intron Camta + chr2R 9451425 intron Camta + chr2R_25_9450001 chr2R_9450001 RAL-301_125b 1529 chr2R 9466632 9466651 chr2R 9466763 9466782 5 125 11.0 6.0 8.5 0.5 150 chr2R 9466632 intron Camta + chr2R 9466707 intron Camta + chr2R 9466782 intron Camta + chr2R_5_9465001 chr2R_9465001 RAL-301_125b 1530 chr2R 9466652 9466666 chr2R 9466758 9466797 8 128 6.5 5.5 6.0 1.1 145 chr2R 9466652 intron Camta + chr2R 9466724 intron Camta + chr2R 9466797 intron Camta + chr2R_8_9465001 chr2R_9465001 RAL-301_125b 1531 chr2R 9480044 9480068 chr2R 9490625 9490649 roo 15 10581 11.0 10.5 10.8 1.3 10605 chr2R 9480044 intergenic not near genes chr2R 9485346 intergenic not near genes chr2R 9490649 intergenic not near genes chr2R_15_9485001 chr2R_9485001 RAL-301_125b 1532 chr2R 9510621 9510696 chr2R 9510787 9510836 22 162 6.5 6.0 6.2 3.1 215 chr2R 9510621 exon brp + chr2R 9510728 intron brp + chr2R 9510836 exon brp + chr2R_22_9510001 chr2R_9510001 RAL-301_125b 1533 chr2R 9531898 9531911 chr2R 9532024 9532037 11 126 0.0 20.5 10.2 1.0 139 chr2R 9531898 intron brp + chr2R 9531968 intron brp + chr2R 9532037 intron brp + chr2R_11_9530001 chr2R_9530001 RAL-301_125b 1534 chr2R 9540261 9540308 chr2R 9540392 9540439 17 128 5.5 13.5 9.5 1.6 178 chr2R 9540261 3` UTR brp + chr2R 9540350 3` UTR brp + chr2R 9540439 3` UTR brp + chr2R_17_9540001 chr2R_9540001 RAL-301_125b 1535 chr2R 9561793 9561839 chr2R 9561930 9561977 13 137 5.5 11.5 8.5 1.4 184 chr2R 9561793 3` UTR,intron CR45281 -,CG1809 + chr2R 9561885 3` UTR,intron CR45281 -,CG1809 + chr2R 9561977 3` UTR,intron CR45281 -,CG1809 + chr2R_13_9560001 chr2R_9560001 RAL-301_125b 1536 chr2R 9726568 9726635 chr2R 9734171 9734238 17.6 33 7603 13.0 14.5 13.8 2.2 7670 chr2R 9726568 intron sqa - chr2R 9730403 intron sqa - chr2R 9734238 intron sqa - chr2R_33_9730001 chr2R_9730001 RAL-301_125b 1537 chr2R 9782404 9782476 chr2R 9782543 9782615 29 137 5.0 9.5 7.2 3.5 211 chr2R 9782404 intron CG1688 - chr2R 9782510 intron CG1688 - chr2R 9782615 intron CG1688 - chr2R_29_9780001 chr2R_9780001 RAL-301_125b 1538 chr2R 9830222 9830300 chr2R 9830355 9830432 27 131 10.0 11.5 10.8 2.3 210 chr2R 9830222 intron hebe - chr2R 9830327 intron hebe - chr2R 9830432 intron hebe - chr2R_27_9830001 chr2R_9830001 RAL-301_125b 1539 chr2R 9862714 9862762 chr2R 9862840 9862878 28 125 11.5 10.5 11.0 2.3 164 chr2R 9862714 intergenic not near genes chr2R 9862796 intergenic not near genes chr2R 9862878 intergenic not near genes chr2R_28_9860001 chr2R_9860001 RAL-301_125b 1540 chr2R 9862765 9862781 chr2R 9862881 9862897 9 124 8.5 20.5 14.5 0.6 132 chr2R 9862765 intergenic not near genes chr2R 9862831 intergenic not near genes chr2R 9862897 intergenic not near genes chr2R_9_9860001 chr2R_9860001 RAL-301_125b 1541 chr2R 9871047 9871052 chr2R 9871583 9871588 roo 6 536 2.5 19.0 10.8 0.5 541 chr2R 9871047 intron cbx - chr2R 9871318 intron cbx - chr2R 9871588 intron,5` UTR cbx -,CG18446 + chr2R_6_9870001 chr2R_9870001 RAL-301_125b 1542 chr2R 9871056 9871071 chr2R 9871572 9871595 roo 6 527 0.0 15.5 7.8 0.7 539 chr2R 9871056 intron cbx - chr2R 9871326 intron cbx - chr2R 9871595 intron,5` UTR cbx -,CG18446 + chr2R_6_9870001 chr2R_9870001 RAL-301_125b 1543 chr2R 9950252 9950320 chr2R 9950379 9950447 23 126 7.0 7.5 7.2 2.8 195 chr2R 9950252 intron Mef2 - chr2R 9950350 intron Mef2 - chr2R 9950447 intron Mef2 - chr2R_23_9950001 chr2R_9950001 RAL-301_125b 1544 chr2R 9998052 9998091 chr2R 9998196 9998235 11 144 6.5 10.5 8.5 1.2 183 chr2R 9998052 intron Pka-R2 - chr2R 9998144 intron Pka-R2 - chr2R 9998235 intron Pka-R2 - chr2R_11_9995001 chr2R_9995001 RAL-301_125b 1545 chr2R 10005509 10005585 chr2R 10005656 10005732 28 147 6.5 12.0 9.2 2.7 223 chr2R 10005509 intron Pka-R2 - chr2R 10005620 intron Pka-R2 - chr2R 10005732 intron Pka-R2 - chr2R_28_10005001 chr2R_10005001 RAL-301_125b 1546 chr2R 10005809 10005875 chr2R 10007024 10007087 1360 31 1211 8.0 11.0 9.5 3.0 1278 chr2R 10005809 intron Pka-R2 - chr2R 10006448 intron Pka-R2 - chr2R 10007087 intron Pka-R2 - chr2R_31_10005001 chr2R_10005001 RAL-301_125b 1547 chr2R 10008555 10008562 chr2R 10008688 10008700 5 134 0.5 1.5 1.0 2.5 145 chr2R 10008555 intron Pka-R2 - chr2R 10008628 intron Pka-R2 - chr2R 10008700 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-301_125b 1548 chr2R 10008565 10008594 chr2R 10008663 10008731 17 128 0.5 0.5 0.5 11.3 166 chr2R 10008565 intron Pka-R2 - chr2R 10008648 intron Pka-R2 - chr2R 10008731 intron Pka-R2 - chr2R_17_10005001 chr2R_10005001 RAL-301_125b 1549 chr2R 10047777 10047823 chr2R 10047910 10047956 18 133 15.0 12.0 13.5 1.2 179 chr2R 10047777 intron oys - chr2R 10047866 intron oys - chr2R 10047956 intron oys - chr2R_18_10045001 chr2R_10045001 RAL-301_125b 1550 chr2R 10132139 10132215 chr2R 10132269 10132345 26 126 8.0 8.5 8.2 2.8 206 chr2R 10132139 exon gem + chr2R 10132242 intron gem + chr2R 10132345 exon gem + chr2R_26_10130001 chr2R_10130001 RAL-301_125b 1551 chr2R 10167069 10167140 chr2R 10167190 10167266 14 114 8.0 7.5 7.8 1.6 197 chr2R 10167069 intron KCNQ - chr2R 10167168 intron KCNQ - chr2R 10167266 intron KCNQ - chr2R_14_10165001 chr2R_10165001 RAL-301_125b 1552 chr2R 10168306 10168365 chr2R 10168433 10168492 13 126 12.0 12.0 12.0 1.0 186 chr2R 10168306 intron KCNQ - chr2R 10168399 intron KCNQ - chr2R 10168492 intron KCNQ - chr2R_13_10165001 chr2R_10165001 RAL-301_125b 1553 chr2R 10171076 10171139 chr2R 10171201 10171273 25 134 0.0 7.0 3.5 5.6 197 chr2R 10171076 intron KCNQ - chr2R 10171174 intron KCNQ - chr2R 10171273 intron KCNQ - chr2R_25_10170001 chr2R_10170001 RAL-301_125b 1554 chr2R 10172587 10172666 chr2R 10172749 10172840 26 165 7.0 0.0 3.5 5.8 253 chr2R 10172587 intron KCNQ - chr2R 10172714 intron KCNQ - chr2R 10172840 intron KCNQ - chr2R_26_10170001 chr2R_10170001 RAL-301_125b 1555 chr2R 10176840 10176908 chr2R 10186057 10186125 roo 37 9217 9.5 15.0 12.2 2.8 9285 chr2R 10176840 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186125 intron KCNQ - chr2R_37_10180001 chr2R_10180001 RAL-301_125b 1556 chr2R 10190401 10190415 chr2R 10190535 10190550 6 135 18.0 14.5 16.2 0.3 149 chr2R 10190401 intron KCNQ - chr2R 10190476 intron KCNQ - chr2R 10190550 intron KCNQ - chr2R_6_10190001 chr2R_10190001 RAL-301_125b 1557 chr2R 10203597 10203660 chr2R 10203732 10203795 28 135 10.5 9.0 9.8 2.6 198 chr2R 10203597 intergenic not near genes chr2R 10203696 intergenic not near genes chr2R 10203795 intergenic not near genes chr2R_28_10200001 chr2R_10200001 RAL-301_125b 1558 chr2R 10206275 10206311 chr2R 10206422 10206458 20 147 15.0 8.0 11.5 1.6 183 chr2R 10206275 3` UTR,3` UTR CG12912 -,Hr46 - chr2R 10206366 3` UTR,3` UTR CG12912 -,Hr46 - chr2R 10206458 3` UTR,3` UTR CG12912 -,Hr46 - chr2R_20_10205001 chr2R_10205001 RAL-301_125b 1559 chr2R 10214522 10214529 chr2R 10214689 10214696 6 167 17.5 23.5 20.5 0.3 174 chr2R 10214522 intron,intron CG12912 -,Hr46 - chr2R 10214609 intron,intron CG12912 -,Hr46 - chr2R 10214696 intron,intron CG12912 -,Hr46 - chr2R_6_10210001 chr2R_10210001 RAL-301_125b 1560 chr2R 10216139 10216207 chr2R 10216267 10216330 18 128 10.5 6.5 8.5 1.9 191 chr2R 10216139 intron,intron CG12912 -,Hr46 - chr2R 10216234 intron,intron CG12912 -,Hr46 - chr2R 10216330 intron,intron CG12912 -,Hr46 - chr2R_18_10215001 chr2R_10215001 RAL-301_125b 1561 chr2R 10222138 10222153 chr2R 10222266 10222281 10 128 9.0 10.0 9.5 1.0 143 chr2R 10222138 intron,intron CG12912 -,Hr46 - chr2R 10222210 intron,intron CG12912 -,Hr46 - chr2R 10222281 intron,intron CG12912 -,Hr46 - chr2R_10_10220001 chr2R_10220001 RAL-301_125b 1562 chr2R 10225710 10225750 chr2R 10225842 10225882 20 132 6.0 9.5 7.8 2.3 172 chr2R 10225710 intron,intron CG12912 -,Hr46 - chr2R 10225796 intron,intron CG12912 -,Hr46 - chr2R 10225882 intron,intron CG12912 -,Hr46 - chr2R_20_10225001 chr2R_10225001 RAL-301_125b 1563 chr2R 10257138 10257185 chr2R 10257279 10257326 23 141 9.5 0.0 4.8 4.0 188 chr2R 10257138 intron CG12911 + chr2R 10257232 intron CG12911 + chr2R 10257326 intron CG12911 + chr2R_23_10255001 chr2R_10255001 RAL-301_125b 1564 chr2R 10263145 10263204 chr2R 10263282 10263341 20 137 13.0 7.5 10.2 1.8 196 chr2R 10263145 3` UTR CR30009 - chr2R 10263243 3` UTR CR30009 - chr2R 10263341 3` UTR CR30009 - chr2R_20_10260001 chr2R_10260001 RAL-301_125b 1565 chr2R 10266464 10266468 chr2R 10266595 10266609 4 138 28.0 8.0 18.0 0.2 145 chr2R 10266464 intron CG12910 + chr2R 10266536 intron CG12910 + chr2R 10266609 intron CG12910 + chr2R_4_10265001 chr2R_10265001 RAL-301_125b 1566 chr2R 10266469 10266528 chr2R 10266590 10266644 24 120 13.0 7.0 10.0 2.2 175 chr2R 10266469 intron CG12910 + chr2R 10266556 intron CG12910 + chr2R 10266644 intron CG12910 + chr2R_24_10265001 chr2R_10265001 RAL-301_125b 1567 chr2R 10274771 10274810 chr2R 10274897 10274936 14 126 16.5 1.5 9.0 1.4 165 chr2R 10274771 intron CAP + chr2R 10274854 intron CAP + chr2R 10274936 intron CAP + chr2R_14_10270001 chr2R_10270001 RAL-301_125b 1568 chr2R 10291819 10291855 chr2R 10291956 10291992 6 137 0.0 12.5 6.2 0.8 173 chr2R 10291819 intron CAP + chr2R 10291906 intron CAP + chr2R 10291992 intron CAP + chr2R_6_10290001 chr2R_10290001 RAL-301_125b 1569 chr2R 10313288 10313341 chr2R 10313426 10313479 27 137 0.0 10.5 5.2 4.4 191 chr2R 10313288 intergenic not near genes chr2R 10313384 intergenic not near genes chr2R 10313479 intergenic Ndg + chr2R_27_10310001 chr2R_10310001 RAL-301_125b 1570 chr2R 10322051 10322081 chr2R 10322183 10322213 11 132 6.5 11.5 9.0 1.1 162 chr2R 10322051 3` UTR Ndg + chr2R 10322132 intergenic Ndg + chr2R 10322213 intergenic Ndg + chr2R_11_10320001 chr2R_10320001 RAL-301_125b 1571 chr2R 10370465 10370520 chr2R 10370651 10370713 24 193 7.0 4.5 5.8 3.5 248 chr2R 10370465 intron CG42732 - chr2R 10370589 intron CG42732 - chr2R 10370713 intron CG42732 - chr2R_24_10370001 chr2R_10370001 RAL-301_125b 1572 chr2R 10411759 10411828 chr2R 10411891 10411960 18 130 9.5 9.5 9.5 1.7 201 chr2R 10411759 intron CG42732 - chr2R 10411860 intron CG42732 - chr2R 10411960 intron CG42732 - chr2R_18_10410001 chr2R_10410001 RAL-301_125b 1573 chr2R 10428975 10429041 chr2R 10429102 10429142 19 125 6.5 4.0 5.2 3.1 167 chr2R 10428975 intergenic not near genes chr2R 10429058 intergenic not near genes chr2R 10429142 intergenic not near genes chr2R_19_10425001 chr2R_10425001 RAL-301_125b 1574 chr2R 10454054 10454125 chr2R 10454181 10454252 30 126 13.0 14.5 13.8 2.0 198 chr2R 10454054 intron,intron Galphao +,Cyp49a1 - chr2R 10454153 intron,intron Galphao +,Cyp49a1 - chr2R 10454252 intron,intron Galphao +,Cyp49a1 - chr2R_30_10450001 chr2R_10450001 RAL-301_125b 1575 chr2R 10548080 10548135 chr2R 10548206 10548261 20 120 6.5 19.5 13.0 1.4 181 chr2R 10548080 intergenic not near genes chr2R 10548170 intergenic not near genes chr2R 10548261 intergenic not near genes chr2R_20_10545001 chr2R_10545001 RAL-301_125b 1576 chr2R 10585512 10585584 chr2R 10594145 10594185 Tirant 5 8623 8.0 10.0 9.0 0.5 8673 chr2R 10585512 intron psq + chr2R 10589848 intron psq + chr2R 10594185 intron psq + chr2R_5_10585001 chr2R_10585001 RAL-301_125b 1577 chr2R 10622311 10622327 chr2R 10637126 10637142 mdg1 5 14815 22.0 0.5 11.2 0.4 14831 chr2R 10622311 intron CG11883 + chr2R 10629726 intron CG11883 + chr2R 10637142 intron CG11883 + chr2R_5_10625001 chr2R_10625001 RAL-301_125b 1578 chr2R 10637128 10637137 chr2R 10637344 10637353 5 216 0.5 13.5 7.0 0.6 225 chr2R 10637128 intron CG11883 + chr2R 10637240 intron CG11883 + chr2R 10637353 intron CG11883 + chr2R_5_10635001 chr2R_10635001 RAL-301_125b 1579 chr2R 10671247 10671272 chr2R 10671380 10671380 10 127 4.5 9.5 7.0 1.2 133 chr2R 10671247 intergenic not near genes chr2R 10671314 intergenic not near genes chr2R 10671380 intergenic not near genes chr2R_10_10670001 chr2R_10670001 RAL-301_125b 1580 chr2R 10700442 10700513 chr2R 10700607 10700672 20 163 7.5 9.0 8.2 2.2 230 chr2R 10700442 intron stan + chr2R 10700557 intron stan + chr2R 10700672 intron stan + chr2R_20_10700001 chr2R_10700001 RAL-301_125b 1581 chr2R 10827281 10827361 chr2R 10827419 10827477 44 136 6.5 9.0 7.8 5.0 196 chr2R 10827281 exon CG12325 + chr2R 10827379 3` UTR CG12325 + chr2R 10827477 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_44_10825001 chr2R_10825001 RAL-301_125b 1582 chr2R 10848279 10848314 chr2R 10848432 10848465 4 152 6.5 8.0 7.2 0.5 186 chr2R 10848279 intron CG30015 - chr2R 10848372 intron CG30015 - chr2R 10848465 exon CG30015 - chr2R_4_10845001 chr2R_10845001 RAL-301_125b 1583 chr2R 10862521 10862596 chr2R 10862682 10862757 31 161 10.5 6.0 8.2 3.4 236 chr2R 10862521 intron CG30015 - chr2R 10862639 intron CG30015 - chr2R 10862757 intron CG30015 - chr2R_31_10860001 chr2R_10860001 RAL-301_125b 1584 chr2R 10871628 10871673 chr2R 10871733 10871807 14 126 6.0 9.5 7.8 1.6 179 chr2R 10871628 intron CG30015 - chr2R 10871718 intron CG30015 - chr2R 10871807 intron CG30015 - chr2R_14_10870001 chr2R_10870001 RAL-301_125b 1585 chr2R 10937741 10937828 chr2R 10937935 10938016 23 190 0.0 7.5 3.8 4.8 275 chr2R 10937741 intergenic not near genes chr2R 10937878 intergenic not near genes chr2R 10938016 intergenic Spn47C - chr2R_23_10935001 chr2R_10935001 RAL-301_125b 1586 chr2R 10948037 10948058 chr2R 10955589 10955659 17.6 7 7594 0.0 7.5 3.8 1.5 7622 chr2R 10948037 intergenic not near genes chr2R 10951848 intergenic not near genes chr2R 10955659 intergenic not near genes chr2R_7_10950001 chr2R_10950001 RAL-301_125b 1587 chr2R 10959040 10959101 chr2R 10959169 10959230 30 128 0.0 9.0 4.5 5.5 190 chr2R 10959040 intergenic not near genes chr2R 10959135 intergenic not near genes chr2R 10959230 intergenic not near genes chr2R_30_10955001 chr2R_10955001 RAL-301_125b 1588 chr2R 10979614 10979680 chr2R 10980135 10980197 297 10 514 6.5 9.0 7.8 1.1 583 chr2R 10979614 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980197 intergenic not near genes chr2R_10_10975001 chr2R_10975001 RAL-301_125b 1589 chr2R 10985040 10985100 chr2R 10985335 10985395 19 295 7.0 7.0 7.0 2.4 355 chr2R 10985040 intron luna - chr2R 10985218 intron luna - chr2R 10985395 intron luna - chr2R_19_10985001 chr2R_10985001 RAL-301_125b 1590 chr2R 10998225 10998232 chr2R 10998383 10998390 5 158 22.0 8.0 15.0 0.3 165 chr2R 10998225 intron luna - chr2R 10998308 intron luna - chr2R 10998390 intron luna - chr2R_5_10995001 chr2R_10995001 RAL-301_125b 1591 chr2R 10998235 10998280 chr2R 10998381 10998420 17 154 11.0 7.5 9.2 1.7 185 chr2R 10998235 intron luna - chr2R 10998328 intron luna - chr2R 10998420 intron luna - chr2R_17_10995001 chr2R_10995001 RAL-301_125b 1592 chr2R 11000823 11000828 chr2R 11001395 11001400 7 572 7.0 13.0 10.0 0.6 577 chr2R 11000823 intron luna - chr2R 11001112 intron luna - chr2R 11001400 intron luna - chr2R_7_11000001 chr2R_11000001 RAL-301_125b 1593 chr2R 11009781 11009840 chr2R 11018997 11019064 roo 27 9219 7.0 9.0 8.0 3.0 9283 chr2R 11009781 intron luna - chr2R 11014422 intron luna - chr2R 11019064 intron luna - chr2R_27_11010001 chr2R_11010001 RAL-301_125b 1594 chr2R 11019835 11019910 chr2R 11024951 11024991 jockey 22 5111 7.5 8.0 7.8 2.5 5156 chr2R 11019835 intron luna - chr2R 11022413 intron luna - chr2R 11024991 intron luna - chr2R_22_11020001 chr2R_11020001 RAL-301_125b 1595 chr2R 11129778 11129842 chr2R 11129906 11129975 27 131 10.0 5.0 7.5 3.2 197 chr2R 11129778 intergenic not near genes chr2R 11129876 intergenic not near genes chr2R 11129975 intergenic not near genes chr2R_27_11125001 chr2R_11125001 RAL-301_125b 1596 chr2R 11133354 11133429 chr2R 11133628 11133703 14 270 7.5 3.0 5.2 2.3 349 chr2R 11133354 intergenic not near genes chr2R 11133528 intergenic not near genes chr2R 11133703 intergenic not near genes chr2R_14_11130001 chr2R_11130001 RAL-301_125b 1597 chr2R 11154151 11154234 chr2R 11154320 11154404 10 170 0.0 8.0 4.0 2.0 253 chr2R 11154151 intron CG13229 - chr2R 11154278 intron CG13229 - chr2R 11154404 intron CG13229 - chr2R_10_11150001 chr2R_11150001 RAL-301_125b 1598 chr2R 11158817 11158895 chr2R 11159036 11159114 30 219 5.5 8.0 6.8 3.8 297 chr2R 11158817 intron CG13229 - chr2R 11158966 intron CG13229 - chr2R 11159114 intron,5` UTR CG13229 -,shn + chr2R_30_11155001 chr2R_11155001 RAL-301_125b 1599 chr2R 11161611 11161657 chr2R 11161801 11161847 23 190 4.5 6.0 5.2 3.7 236 chr2R 11161611 intron,intron CG13229 -,shn + chr2R 11161729 intron,intron CG13229 -,shn + chr2R 11161847 intron,intron CG13229 -,shn + chr2R_23_11160001 chr2R_11160001 RAL-301_125b 1600 chr2R 11166252 11166270 chr2R 11166381 11166399 5 129 12.5 0.0 6.2 0.7 147 chr2R 11166252 intron,intron CG13229 -,shn + chr2R 11166326 intron,intron CG13229 -,shn + chr2R 11166399 intron,intron CG13229 -,shn + chr2R_5_11165001 chr2R_11165001 RAL-301_125b 1601 chr2R 11179223 11179274 chr2R 11179359 11179400 16 134 14.5 12.5 13.5 1.1 177 chr2R 11179223 intron shn + chr2R 11179312 intron shn + chr2R 11179400 intron shn + chr2R_16_11175001 chr2R_11175001 RAL-301_125b 1602 chr2R 11207783 11207834 chr2R 11208025 11208076 BS 19 242 12.5 11.0 11.8 1.5 293 chr2R 11207783 intron shn + chr2R 11207930 intron shn + chr2R 11208076 intron shn + chr2R_19_11205001 chr2R_11205001 RAL-301_125b 1603 chr2R 11263832 11263835 chr2R 11263998 11264001 5 166 0.0 22.5 11.2 0.4 169 chr2R 11263832 intergenic not near genes chr2R 11263916 intergenic not near genes chr2R 11264001 intergenic not near genes chr2R_5_11260001 chr2R_11260001 RAL-301_125b 1604 chr2R 11297579 11297637 chr2R 11301950 11302008 flea 27 4369 10.5 15.5 13.0 1.9 4429 chr2R 11297579 intergenic CG42336 - chr2R 11299794 intergenic not near genes chr2R 11302008 5` UTR CG7741 + chr2R_27_11295001 chr2R_11295001 RAL-301_125b 1605 chr2R 11344104 11344180 chr2R 11344248 11344322 25 145 0.0 15.0 7.5 2.9 218 chr2R 11344104 intergenic alphaTry - chr2R 11344213 intergenic alphaTry - chr2R 11344322 exon alphaTry - chr2R_25_11340001 chr2R_11340001 RAL-301_125b 1606 chr2R 8687503 8687503 chr2R 11345324 11345366 5 2657842 11.0 63.5 37.2 0.1 2657863 chr2R 8687503 intergenic not near genes chr2R 10016434 intron Pka-R2 - chr2R 11345366 exon epsilonTry - chr2R_5_10015001 chr2R_10015001 RAL-301_125b 1607 chr2R 11365555 11365573 chr2R 11365698 11365716 13 143 61.0 61.0 61.0 0.2 161 chr2R 11365555 intergenic not near genes chr2R 11365636 intergenic not near genes chr2R 11365716 intergenic not near genes chr2R_13_11365001 chr2R_11365001 RAL-301_125b 1608 chr2R 11380481 11380559 chr2R 11380643 11380705 29 160 5.5 9.5 7.5 3.4 224 chr2R 11380481 3` UTR Sod3 - chr2R 11380593 3` UTR Sod3 - chr2R 11380705 exon Sod3 - chr2R_29_11380001 chr2R_11380001 RAL-301_125b 1609 chr2R 11391199 11391205 chr2R 11391325 11391331 4 126 22.0 11.5 16.8 0.2 132 chr2R 11391199 intron sprt - chr2R 11391265 intron sprt - chr2R 11391331 intron sprt - chr2R_4_11390001 chr2R_11390001 RAL-301_125b 1610 chr2R 11391214 11391266 chr2R 11391319 11391381 14 122 12.0 13.0 12.5 1.0 167 chr2R 11391214 intron sprt - chr2R 11391298 intron sprt - chr2R 11391381 intron sprt - chr2R_14_11390001 chr2R_11390001 RAL-301_125b 1611 chr2R 11398939 11398973 chr2R 11399192 11399231 15 258 15.5 10.0 12.8 1.1 292 chr2R 11398939 intergenic not near genes chr2R 11399085 intergenic not near genes chr2R 11399231 intergenic not near genes chr2R_15_11395001 chr2R_11395001 RAL-301_125b 1612 chr2R 11398974 11399003 chr2R 11399185 11399231 12 246 7.5 9.5 8.5 1.3 257 chr2R 11398974 intergenic not near genes chr2R 11399102 intergenic not near genes chr2R 11399231 intergenic not near genes chr2R_12_11395001 chr2R_11395001 RAL-301_125b 1613 chr2R 11415474 11415545 chr2R 11418673 11418743 opus 26 3195 15.0 11.5 13.2 1.8 3269 chr2R 11415474 intron Drip - chr2R 11417108 intron Drip - chr2R 11418743 intron Drip - chr2R_26_11415001 chr2R_11415001 RAL-301_125b 1614 chr2R 11439168 11439218 chr2R 11439284 11439329 22 121 8.0 14.5 11.2 1.8 161 chr2R 11439168 intron CG7777 + chr2R 11439248 intron CG7777 + chr2R 11439329 intron CG7777 + chr2R_22_11435001 chr2R_11435001 RAL-301_125b 1615 chr2R 11472603 11472666 chr2R 11473850 11473913 pogo 31 1246 10.0 9.5 9.8 2.9 1310 chr2R 11472603 intergenic not near genes chr2R 11473258 intergenic not near genes chr2R 11473913 intergenic not near genes chr2R_31_11470001 chr2R_11470001 RAL-301_125b 1616 chr2R 11516743 11516821 chr2R 11516876 11516935 26 132 7.5 7.5 7.5 3.1 192 chr2R 11516743 intergenic not near genes chr2R 11516839 intergenic not near genes chr2R 11516935 intergenic not near genes chr2R_26_11515001 chr2R_11515001 RAL-301_125b 1617 chr2R 11555427 11555439 chr2R 11555569 11555581 7 142 0.0 5.5 2.8 1.8 154 chr2R 11555427 intergenic not near genes chr2R 11555504 intergenic not near genes chr2R 11555581 intergenic not near genes chr2R_7_11555001 chr2R_11555001 RAL-301_125b 1618 chr2R 11625263 11625273 chr2R 11625391 11625401 5 128 12.0 0.0 6.0 0.7 138 chr2R 11625263 5` UTR CG9005 - chr2R 11625332 intron CG9005 - chr2R 11625401 intron CG9005 - chr2R_5_11625001 chr2R_11625001 RAL-301_125b 1619 chr2R 11637276 11637318 chr2R 11637403 11637440 16 125 11.5 14.5 13.0 1.1 164 chr2R 11637276 intron CG9005 - chr2R 11637358 intron CG9005 - chr2R 11637440 intron CG9005 - chr2R_16_11635001 chr2R_11635001 RAL-301_125b 1620 chr2R 11660352 11660388 chr2R 11660519 11660555 20 166 0.0 11.0 5.5 3.1 203 chr2R 11660352 intron Roc2 - chr2R 11660454 intron Roc2 - chr2R 11660555 intron Roc2 - chr2R_20_11660001 chr2R_11660001 RAL-301_125b 1621 chr2R 11724108 11724179 chr2R 11724241 11724312 27 133 7.0 8.5 7.8 3.1 204 chr2R 11724108 intron pyr + chr2R 11724210 intron pyr + chr2R 11724312 exon pyr + chr2R_27_11720001 chr2R_11720001 RAL-301_125b 1622 chr2R 11746444 11746525 chr2R 11746575 11746670 7 133 0.0 0.0 0.0 7.0 226 chr2R 11746444 intergenic not near genes chr2R 11746557 intergenic not near genes chr2R 11746670 intergenic not near genes chr2R_7_11745001 chr2R_11745001 RAL-301_125b 1623 chr2R 11863809 11863884 chr2R 11863946 11864021 30 136 9.0 11.0 10.0 2.7 212 chr2R 11863809 intergenic CG42531 + chr2R 11863915 intergenic CG42531 + chr2R 11864021 intergenic CG42531 + chr2R_30_11860001 chr2R_11860001 RAL-301_125b 1624 chr2R 11951297 11951357 chr2R 11951424 11951484 21 126 14.0 3.0 8.5 2.2 187 chr2R 11951297 intron CG13188 + chr2R 11951390 intron CG13188 + chr2R 11951484 intron CG13188 + chr2R_21_11950001 chr2R_11950001 RAL-301_125b 1625 chr2R 8518788 8518793 chr2R 12066132 12066147 7 3547345 35.0 25.0 30.0 0.2 3547359 chr2R 8518788 intron mtt - chr2R 10292468 intron CAP + chr2R 12066147 exon CG8888 - chr2R_7_10290001 chr2R_10290001 RAL-301_125b 1626 chr2R 12120359 12120437 chr2R 12120491 12120559 25 120 13.0 6.0 9.5 2.4 200 chr2R 12120359 intergenic not near genes chr2R 12120459 intergenic not near genes chr2R 12120559 intergenic not near genes chr2R_25_12120001 chr2R_12120001 RAL-301_125b 1627 chr2R 12124782 12124856 chr2R 12124916 12124989 34 132 8.0 7.0 7.5 4.0 207 chr2R 12124782 intergenic not near genes chr2R 12124886 intergenic not near genes chr2R 12124989 intergenic not near genes chr2R_34_12120001 chr2R_12120001 RAL-301_125b 1628 chr2R 12185956 12186036 chr2R 12186101 12186130 55 142 15.0 15.5 15.2 3.4 174 chr2R 12185956 intron Cyp6g1 + chr2R 12186043 intron Cyp6g1 + chr2R 12186130 intron Cyp6g1 + chr2R_55_12185001 chr2R_12185001 RAL-301_125b 1629 chr2R 12185223 12185265 chr2R 12188098 12188140 16 2876 40.0 210.0 125.0 0.1 2917 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188140 3` UTR Cyp6g1 + chr2R_16_12185001 chr2R_12185001 RAL-301_125b 1630 chr2R 12189376 12189405 chr2R 12189600 12189633 13 235 142.0 130.5 136.2 0.1 257 chr2R 12189376 exon Cyp6g2 - chr2R 12189504 exon Cyp6g2 - chr2R 12189633 exon Cyp6g2 - chr2R_13_12185001 chr2R_12185001 RAL-301_125b 1631 chr2R 12187483 12187484 chr2R 12190049 12190061 12 2567 115.0 153.5 134.2 0.1 2578 chr2R 12187483 exon Cyp6g1 + chr2R 12188772 exon Cyp6g2 - chr2R 12190061 exon Cyp6g2 - chr2R_12_12185001 chr2R_12185001 RAL-301_125b 1632 chr2R 12187481 12187511 chr2R 12190062 12190078 18 2570 145.5 140.0 142.8 0.1 2597 chr2R 12187481 exon Cyp6g1 + chr2R 12188780 exon Cyp6g2 - chr2R 12190078 exon Cyp6g2 - chr2R_18_12185001 chr2R_12185001 RAL-301_125b 1633 chr2R 12187480 12187522 chr2R 12190081 12190124 52 2578 151.0 130.0 140.5 0.4 2644 chr2R 12187480 exon Cyp6g1 + chr2R 12188802 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_52_12185001 chr2R_12185001 RAL-301_125b 1634 chr2R 12213857 12213862 chr2R 12213986 12213991 5 129 3.5 17.5 10.5 0.4 134 chr2R 12213857 intergenic CG13171 + chr2R 12213924 intergenic CG13171 + chr2R 12213991 intergenic CG13171 + chr2R_5_12210001 chr2R_12210001 RAL-301_125b 1635 chr2R 12217529 12217543 chr2R 12217660 12217674 9 130 18.0 8.0 13.0 0.6 145 chr2R 12217529 intergenic not near genes chr2R 12217602 intergenic not near genes chr2R 12217674 intergenic not near genes chr2R_9_12215001 chr2R_12215001 RAL-301_125b 1636 chr2R 12217545 12217597 chr2R 12217658 12217718 34 126 10.0 7.5 8.8 3.5 173 chr2R 12217545 intergenic not near genes chr2R 12217632 intergenic not near genes chr2R 12217718 intergenic not near genes chr2R_34_12215001 chr2R_12215001 RAL-301_125b 1637 chr2R 12284292 12284329 chr2R 12284426 12284463 13 133 0.0 15.0 7.5 1.5 171 chr2R 12284292 intron CG42700 + chr2R 12284378 intron CG42700 + chr2R 12284463 intron CG42700 + chr2R_13_12280001 chr2R_12280001 RAL-301_125b 1638 chr2R 12320678 12320728 chr2R 12320988 12321038 20 310 5.0 9.0 7.0 2.5 360 chr2R 12320678 3` UTR CR44316 - chr2R 12320858 intron CR44316 - chr2R 12321038 intergenic CR44316 -,CG13163 + chr2R_20_12320001 chr2R_12320001 RAL-301_125b 1639 chr2R 12334843 12334851 chr2R 12334971 12334979 4 128 21.5 10.0 15.8 0.2 136 chr2R 12334843 intergenic CG8490 + chr2R 12334911 intergenic CG8490 + chr2R 12334979 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-301_125b 1640 chr2R 12363340 12363412 chr2R 12363822 12363894 15 479 8.0 8.5 8.2 1.6 554 chr2R 12363340 intergenic CG30043 + chr2R 12363617 intergenic CG30043 + chr2R 12363894 intergenic not near genes chr2R_15_12360001 chr2R_12360001 RAL-301_125b 1641 chr2R 12417444 12417453 chr2R 12417544 12417583 13 118 18.5 10.0 14.2 0.9 139 chr2R 12417444 exon CG13157 + chr2R 12417514 exon CG13157 + chr2R 12417583 exon CG13157 + chr2R_13_12415001 chr2R_12415001 RAL-301_125b 1642 chr2R 12417454 12417486 chr2R 12417540 12417596 12 120 9.5 9.0 9.2 1.2 142 chr2R 12417454 exon CG13157 + chr2R 12417525 exon CG13157 + chr2R 12417596 exon CG13157 + chr2R_12_12415001 chr2R_12415001 RAL-301_125b 1643 chr2R 12481150 12481166 chr2R 12482980 12482992 roo 11 1844 5.0 15.0 10.0 1.0 1842 chr2R 12481150 exon Dh44-R2 + chr2R 12482071 intron Dh44-R2 + chr2R 12482992 intron Dh44-R2 + chr2R_11_12480001 chr2R_12480001 RAL-301_125b 1644 chr2R 12501642 12501667 chr2R 12503854 12503869 Rt1c 8 2206 17.5 8.5 13.0 0.6 2227 chr2R 12501642 intron fdl - chr2R 12502756 intron fdl - chr2R 12503869 intron fdl - chr2R_8_12500001 chr2R_12500001 RAL-301_125b 1645 chr2R 12501672 12501723 chr2R 12503853 12503915 Rt1c 8 2198 4.0 8.5 6.2 1.1 2243 chr2R 12501672 intron fdl - chr2R 12502794 intron fdl - chr2R 12503915 intron fdl - chr2R_8_12500001 chr2R_12500001 RAL-301_125b 1646 chr2R 12540430 12540454 chr2R 12540563 12540567 9 131 13.0 15.0 14.0 0.6 137 chr2R 12540430 intron fra + chr2R 12540498 intron fra + chr2R 12540567 intron fra + chr2R_9_12540001 chr2R_12540001 RAL-301_125b 1647 chr2R 12540456 12540495 chr2R 12540557 12540617 18 122 6.5 12.0 9.2 1.8 161 chr2R 12540456 intron fra + chr2R 12540536 intron fra + chr2R 12540617 intron fra + chr2R_18_12540001 chr2R_12540001 RAL-301_125b 1648 chr2R 12564999 12565039 chr2R 12565245 12565285 21 246 9.5 5.0 7.2 2.6 286 chr2R 12564999 intergenic CG33775 - chr2R 12565142 intergenic CG33775 - chr2R 12565285 intergenic CG33775 - chr2R_21_12565001 chr2R_12565001 RAL-301_125b 1649 chr2R 12565518 12565580 chr2R 12565938 12566000 27 420 9.5 11.5 10.5 2.3 482 chr2R 12565518 intergenic not near genes chr2R 12565759 intergenic Cyp301a1 + chr2R 12566000 intergenic Cyp301a1 + chr2R_27_12565001 chr2R_12565001 RAL-301_125b 1650 chr2R 12670320 12670399 chr2R 12670477 12670558 17 158 8.5 0.0 4.2 3.3 238 chr2R 12670320 intergenic nemy -,CG42708 - chr2R 12670439 intergenic CG42708 -,nemy - chr2R 12670558 3` UTR CG42708 - chr2R_17_12670001 chr2R_12670001 RAL-301_125b 1651 chr2R 12677374 12677398 chr2R 12677508 12677532 13 134 0.0 18.0 9.0 1.3 158 chr2R 12677374 intron CG42708 - chr2R 12677453 intron CG42708 - chr2R 12677532 intron CG42708 - chr2R_13_12675001 chr2R_12675001 RAL-301_125b 1652 chr2R 12702281 12702295 chr2R 12702412 12702416 6 129 17.0 0.0 8.5 0.6 135 chr2R 12702281 intergenic not near genes chr2R 12702348 intergenic not near genes chr2R 12702416 intergenic not near genes chr2R_6_12700001 chr2R_12700001 RAL-301_125b 1653 chr2R 12707468 12707547 chr2R 12715884 12715963 roo 25 8416 7.0 8.5 7.8 2.8 8495 chr2R 12707468 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715963 intron CG42663 + chr2R_25_12710001 chr2R_12710001 RAL-301_125b 1654 chr2R 12726280 12726346 chr2R 12726422 12726488 30 142 11.0 14.0 12.5 2.2 208 chr2R 12726280 intron CG42663 + chr2R 12726384 intron CG42663 + chr2R 12726488 intron CG42663 + chr2R_30_12725001 chr2R_12725001 RAL-301_125b 1655 chr2R 12728857 12728906 chr2R 12729008 12729054 17 148 0.0 17.5 8.8 1.7 197 chr2R 12728857 intron CG42663 + chr2R 12728956 intron CG42663 + chr2R 12729054 intron CG42663 + chr2R_17_12725001 chr2R_12725001 RAL-301_125b 1656 chr2R 12734005 12734081 chr2R 12734136 12734209 17 125 5.5 8.0 6.8 2.2 204 chr2R 12734005 intron CG42663 + chr2R 12734107 intron CG42663 + chr2R 12734209 intron CG42663 + chr2R_17_12730001 chr2R_12730001 RAL-301_125b 1657 chr2R 12777762 12777777 chr2R 12777903 12777918 9 141 13.5 10.0 11.8 0.7 156 chr2R 12777762 5` UTR CR45266 + chr2R 12777840 5` UTR CR45266 + chr2R 12777918 5` UTR CR45266 + chr2R_9_12775001 chr2R_12775001 RAL-301_125b 1658 chr2R 12789250 12789318 chr2R 12797663 12797731 roo 25 8408 9.0 5.0 7.0 3.1 8481 chr2R 12789250 intron,3` UTR sca +,CR45137 - chr2R 12793490 intron,intron sca +,CR45137 - chr2R 12797731 intron,3` UTR sca +,CR45137 - chr2R_25_12790001 chr2R_12790001 RAL-301_125b 1659 chr2R 12819431 12819474 chr2R 12824531 12824589 jockey 21 5113 7.5 10.0 8.8 2.1 5158 chr2R 12819431 intergenic not near genes chr2R 12822010 intergenic not near genes chr2R 12824589 intergenic not near genes chr2R_21_12820001 chr2R_12820001 RAL-301_125b 1660 chr2R 12856963 12856979 chr2R 12868317 12868333 accord 6 11354 18.5 16.0 17.2 0.3 11370 chr2R 12856963 intron CG17574 - chr2R 12862648 intron CG17574 - chr2R 12868333 intron,intron CG17574 -,CR45140 + chr2R_6_12860001 chr2R_12860001 RAL-301_125b 1661 chr2R 12872090 12872099 chr2R 12872348 12872357 6 258 12.5 0.0 6.2 0.8 267 chr2R 12872090 intergenic bic + chr2R 12872224 intergenic bic + chr2R 12872357 intergenic CR43469 +,CG3790 - chr2R_6_12870001 chr2R_12870001 RAL-301_125b 1662 chr2R 12895688 12895735 chr2R 12896169 12896216 24 481 0.5 24.5 12.5 1.8 528 chr2R 12895688 intron vg + chr2R 12895952 intron vg + chr2R 12896216 intron vg + chr2R_24_12895001 chr2R_12895001 RAL-301_125b 1663 chr2R 12907574 12907582 chr2R 12907715 12907721 4 140 23.0 20.5 21.8 0.2 147 chr2R 12907574 intergenic CR44461 + chr2R 12907648 intergenic CR44461 + chr2R 12907721 intergenic CR44461 + chr2R_4_12905001 chr2R_12905001 RAL-301_125b 1664 chr2R 12907585 12907615 chr2R 12907713 12907745 17 137 13.0 20.5 16.8 1.0 160 chr2R 12907585 intergenic CR44461 + chr2R 12907665 intergenic CR44461 + chr2R 12907745 intergenic CR44461 + chr2R_17_12905001 chr2R_12905001 RAL-301_125b 1665 chr2R 12988231 12988271 chr2R 12988393 12988433 19 161 9.5 16.0 12.8 1.4 202 chr2R 12988231 intergenic not near genes chr2R 12988332 intergenic not near genes chr2R 12988433 intergenic not near genes chr2R_19_12985001 chr2R_12985001 RAL-301_125b 1666 chr2R 13035917 13035941 chr2R 13036068 13036092 11 151 8.5 0.0 4.2 2.1 175 chr2R 13035917 intergenic not near genes chr2R 13036004 intergenic not near genes chr2R 13036092 intergenic not near genes chr2R_11_13035001 chr2R_13035001 RAL-301_125b 1667 chr2R 13089707 13089745 chr2R 13089867 13089890 18 158 18.0 8.5 13.2 1.3 183 chr2R 13089707 intergenic not near genes chr2R 13089798 intergenic not near genes chr2R 13089890 intergenic not near genes chr2R_18_13085001 chr2R_13085001 RAL-301_125b 1668 chr2R 13089748 13089774 chr2R 13089865 13089897 17 147 9.5 8.0 8.8 1.7 149 chr2R 13089748 intergenic not near genes chr2R 13089822 intergenic not near genes chr2R 13089897 intergenic not near genes chr2R_17_13085001 chr2R_13085001 RAL-301_125b 1669 chr2R 13136796 13136817 chr2R 13141644 13141665 Doc 8 4848 20.0 14.5 17.2 0.4 4869 chr2R 13136796 exon Cap-G + chr2R 13139230 intron Cap-G + chr2R 13141665 intron Cap-G + chr2R_8_13135001 chr2R_13135001 RAL-301_125b 1670 chr2R 13136818 13136858 chr2R 13141637 13141706 Doc 14 4846 12.0 12.0 12.0 1.1 4888 chr2R 13136818 exon Cap-G + chr2R 13139262 intron Cap-G + chr2R 13141706 intron Cap-G + chr2R_14_13135001 chr2R_13135001 RAL-301_125b 1671 chr2R 13167389 13167450 chr2R 13167533 13167600 20 145 11.5 0.0 5.8 2.9 211 chr2R 13167389 intron GLaz - chr2R 13167494 intron GLaz - chr2R 13167600 intron GLaz - chr2R_20_13165001 chr2R_13165001 RAL-301_125b 1672 chr2R 13194805 13194848 chr2R 13194947 13194994 11 139 12.0 9.0 10.5 1.0 189 chr2R 13194805 intergenic not near genes chr2R 13194900 intergenic not near genes chr2R 13194994 intergenic not near genes chr2R_11_13190001 chr2R_13190001 RAL-301_125b 1673 chr2R 13218260 13218319 chr2R 13218393 13218476 14 143 10.5 0.0 5.2 2.3 216 chr2R 13218260 intron CG4630 - chr2R 13218368 intron CG4630 - chr2R 13218476 intron CG4630 - chr2R_14_13215001 chr2R_13215001 RAL-301_125b 1674 chr2R 13258524 13258578 chr2R 13259820 13259874 25 1295 12.0 14.5 13.2 1.8 1350 chr2R 13258524 intergenic CG10799 + chr2R 13259199 intergenic not near genes chr2R 13259874 intergenic CG42319 + chr2R_25_13255001 chr2R_13255001 RAL-301_125b 1675 chr2R 13300054 13300102 chr2R 13300188 13300235 15 133 7.5 6.0 6.8 1.9 181 chr2R 13300054 intron CG17047 + chr2R 13300144 intron CG17047 + chr2R 13300235 exon CG17047 + chr2R_15_13300001 chr2R_13300001 RAL-301_125b 1676 chr2R 13305450 13305509 chr2R 13305582 13305641 31 131 9.5 15.0 12.2 2.3 191 chr2R 13305450 intergenic not near genes chr2R 13305546 intergenic not near genes chr2R 13305641 intergenic not near genes chr2R_31_13305001 chr2R_13305001 RAL-301_125b 1677 chr2R 13309610 13309683 chr2R 13309778 13309851 18 168 8.0 7.5 7.8 2.0 241 chr2R 13309610 intergenic not near genes chr2R 13309730 intergenic not near genes chr2R 13309851 intergenic not near genes chr2R_18_13305001 chr2R_13305001 RAL-301_125b 1678 chr2R 13364663 13364731 chr2R 13364799 13364867 28 136 8.5 5.5 7.0 3.5 204 chr2R 13364663 intergenic not near genes chr2R 13364765 intergenic not near genes chr2R 13364867 intergenic not near genes chr2R_28_13360001 chr2R_13360001 RAL-301_125b 1679 chr2R 13376607 13376633 chr2R 13376767 13376793 12 160 3.0 8.0 5.5 1.8 186 chr2R 13376607 intron CG10814 - chr2R 13376700 intron CG10814 - chr2R 13376793 intron CG10814 - chr2R_12_13375001 chr2R_13375001 RAL-301_125b 1680 chr2R 13403871 13403938 chr2R 13404006 13404073 35 135 6.0 0.0 3.0 8.8 202 chr2R 13403871 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404073 intergenic not near genes chr2R_35_13400001 chr2R_13400001 RAL-301_125b 1681 chr2R 13418251 13418322 chr2R 13418387 13418421 31 135 10.5 11.5 11.0 2.6 170 chr2R 13418251 intron CG42321 - chr2R 13418336 intron CG42321 - chr2R 13418421 intron CG42321 - chr2R_31_13415001 chr2R_13415001 RAL-301_125b 1682 chr2R 13437201 13437221 chr2R 13437422 13437443 15 221 17.5 12.0 14.8 0.9 242 chr2R 13437201 intron CG42321 - chr2R 13437322 intron CG42321 - chr2R 13437443 intron CG42321 - chr2R_15_13435001 chr2R_13435001 RAL-301_125b 1683 chr2R 13437227 13437274 chr2R 13437449 13437496 23 220 8.0 14.5 11.2 1.9 269 chr2R 13437227 intron CG42321 - chr2R 13437362 intron CG42321 - chr2R 13437496 intron CG42321 - chr2R_23_13435001 chr2R_13435001 RAL-301_125b 1684 chr2R 13439063 13439137 chr2R 13439228 13439301 19 164 4.5 4.0 4.2 3.7 238 chr2R 13439063 intergenic CG42321 -,cnn - chr2R 13439182 intergenic CG42321 -,cnn - chr2R 13439301 intergenic cnn -,CG42321 - chr2R_19_13435001 chr2R_13435001 RAL-301_125b 1685 chr2R 13449674 13449684 chr2R 13449801 13449811 8 127 7.0 0.0 3.5 1.8 137 chr2R 13449674 intron cnn - chr2R 13449742 intron cnn - chr2R 13449811 intron cnn - chr2R_8_13445001 chr2R_13445001 RAL-301_125b 1686 chr2R 13498773 13498828 chr2R 13498889 13498918 11 118 10.5 8.0 9.2 1.1 145 chr2R 13498773 intron drk - chr2R 13498846 intron drk - chr2R 13498918 intron drk - chr2R_11_13495001 chr2R_13495001 RAL-301_125b 1687 chr2R 13530258 13530334 chr2R 13530393 13530471 17 136 7.0 0.0 3.5 3.8 213 chr2R 13530258 intron Vmat - chr2R 13530364 intron Vmat - chr2R 13530471 intron Vmat - chr2R_17_13530001 chr2R_13530001 RAL-301_125b 1688 chr2R 13540152 13540160 chr2R 13540284 13540292 7 132 7.0 0.0 3.5 1.6 140 chr2R 13540152 intron CG6145 - chr2R 13540222 intron CG6145 - chr2R 13540292 intron CG6145 - chr2R_7_13540001 chr2R_13540001 RAL-301_125b 1689 chr2R 13540340 13540409 chr2R 13540640 13540709 12 300 0.0 7.5 3.8 2.5 369 chr2R 13540340 intron CG6145 - chr2R 13540524 intron CG6145 - chr2R 13540709 intron CG6145 - chr2R_12_13540001 chr2R_13540001 RAL-301_125b 1690 chr2R 13544511 13544583 chr2R 13544637 13544706 24 126 1.0 10.5 5.8 3.5 195 chr2R 13544511 intron CG6145 - chr2R 13544608 intron CG6145 - chr2R 13544706 intron CG6145 - chr2R_24_13540001 chr2R_13540001 RAL-301_125b 1691 chr2R 13547030 13547097 chr2R 13547276 13547342 28 245 11.0 8.5 9.8 2.6 312 chr2R 13547030 intron CG6145 - chr2R 13547186 intron CG6145 - chr2R 13547342 intron CG6145 - chr2R_28_13545001 chr2R_13545001 RAL-301_125b 1692 chr2R 13554687 13554772 chr2R 13554829 13554907 14 134 0.0 11.5 5.8 2.1 220 chr2R 13554687 intron Roe1 + chr2R 13554797 intron Roe1 + chr2R 13554907 intron Roe1 + chr2R_14_13550001 chr2R_13550001 RAL-301_125b 1693 chr2R 13568126 13568189 chr2R 13568259 13568320 13 130 8.0 2.5 5.2 2.1 194 chr2R 13568126 intergenic not near genes chr2R 13568223 intergenic not near genes chr2R 13568320 intergenic not near genes chr2R_13_13565001 chr2R_13565001 RAL-301_125b 1694 chr2R 13573342 13573370 chr2R 13573482 13573510 9 140 4.0 9.5 6.8 1.2 168 chr2R 13573342 intergenic CG42808 - chr2R 13573426 intergenic CG42808 - chr2R 13573510 intergenic CG42808 - chr2R_9_13570001 chr2R_13570001 RAL-301_125b 1695 chr2R 13580451 13580521 chr2R 13580852 13580921 jockey 27 399 11.5 9.0 10.2 2.4 470 chr2R 13580451 3` UTR CG6191 - chr2R 13580686 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580921 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_27_13580001 chr2R_13580001 RAL-301_125b 1696 chr2R 13598998 13599072 chr2R 13599132 13599195 27 127 8.5 9.5 9.0 2.7 197 chr2R 13598998 intergenic S-Lap5 + chr2R 13599096 intergenic S-Lap5 + chr2R 13599195 intergenic S-Lap5 + chr2R_27_13595001 chr2R_13595001 RAL-301_125b 1697 chr2R 13599970 13600003 chr2R 13600104 13600119 6 135 13.5 0.0 6.8 0.8 149 chr2R 13599970 intergenic not near genes chr2R 13600044 intergenic not near genes chr2R 13600119 intergenic not near genes chr2R_6_13600001 chr2R_13600001 RAL-301_125b 1698 chr2R 13608233 13608300 chr2R 13608357 13608412 28 127 10.5 7.0 8.8 2.9 179 chr2R 13608233 intergenic CG12464 - chr2R 13608322 intergenic CG12464 - chr2R 13608412 intergenic CG12464 - chr2R_28_13605001 chr2R_13605001 RAL-301_125b 1699 chr2R 13622167 13622185 chr2R 13622293 13622311 9 126 0.5 10.5 5.5 1.4 144 chr2R 13622167 intergenic not near genes chr2R 13622239 intergenic not near genes chr2R 13622311 intergenic not near genes chr2R_9_13620001 chr2R_13620001 RAL-301_125b 1700 chr2R 13670056 13670101 chr2R 13670240 13670285 21 184 14.0 12.0 13.0 1.5 229 chr2R 13670056 intron,exon fas +,CG18368 + chr2R 13670170 intron,exon fas +,CG18368 + chr2R 13670285 intron,exon fas +,CG18368 + chr2R_21_13670001 chr2R_13670001 RAL-301_125b 1701 chr2R 13690955 13691018 chr2R 13691079 13691149 23 131 7.5 13.0 10.2 2.1 194 chr2R 13690955 intron fas + chr2R 13691052 intron fas + chr2R 13691149 intron fas + chr2R_23_13690001 chr2R_13690001 RAL-301_125b 1702 chr2R 13694579 13694653 chr2R 13694706 13694781 17 127 4.0 7.0 5.5 2.6 202 chr2R 13694579 intron fas + chr2R 13694680 intron fas + chr2R 13694781 intron fas + chr2R_17_13690001 chr2R_13690001 RAL-301_125b 1703 chr2R 13704211 13704286 chr2R 13704351 13704426 22 136 4.5 6.0 5.2 3.5 215 chr2R 13704211 intron fas + chr2R 13704318 intron fas + chr2R 13704426 intron fas + chr2R_22_13700001 chr2R_13700001 RAL-301_125b 1704 chr2R 13721158 13721166 chr2R 13721291 13721299 4 133 23.0 9.0 16.0 0.2 141 chr2R 13721158 intron fas + chr2R 13721228 intron fas + chr2R 13721299 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-301_125b 1705 chr2R 13721167 13721229 chr2R 13721290 13721337 30 124 11.5 8.5 10.0 2.7 170 chr2R 13721167 intron fas + chr2R 13721252 intron fas + chr2R 13721337 intron fas + chr2R_30_13720001 chr2R_13720001 RAL-301_125b 1706 chr2R 13727802 13727837 chr2R 13727938 13727973 15 135 16.5 18.5 17.5 0.8 171 chr2R 13727802 intron fas + chr2R 13727888 intron fas + chr2R 13727973 intron fas + chr2R_15_13725001 chr2R_13725001 RAL-301_125b 1707 chr2R 13728090 13728153 chr2R 13735797 13735860 opus 27 7707 11.5 7.5 9.5 2.6 7770 chr2R 13728090 intron fas + chr2R 13731975 intron fas + chr2R 13735860 intron fas + chr2R_27_13730001 chr2R_13730001 RAL-301_125b 1708 chr2R 13790276 13790298 chr2R 13790402 13790422 9 126 20.5 0.5 10.5 0.8 146 chr2R 13790276 intergenic not near genes chr2R 13790349 intergenic not near genes chr2R 13790422 intergenic not near genes chr2R_9_13790001 chr2R_13790001 RAL-301_125b 1709 chr2R 13793107 13793158 chr2R 13793232 13793284 21 122 11.5 8.5 10.0 1.9 177 chr2R 13793107 intergenic not near genes chr2R 13793196 intergenic not near genes chr2R 13793284 intergenic not near genes chr2R_21_13790001 chr2R_13790001 RAL-301_125b 1710 chr2R 13905569 13905630 chr2R 13907601 13907652 Rt1a 14 2029 10.5 11.0 10.8 1.2 2083 chr2R 13905569 intron shot - chr2R 13906610 intron shot - chr2R 13907652 intron shot - chr2R_14_13905001 chr2R_13905001 RAL-301_125b 1711 chr2R 13924424 13924447 chr2R 13924590 13924613 12 166 17.5 7.5 12.5 0.9 189 chr2R 13924424 intron shot - chr2R 13924518 intron shot - chr2R 13924613 intron shot - chr2R_12_13920001 chr2R_13920001 RAL-301_125b 1712 chr2R 13925802 13925871 chr2R 13926028 13926097 44 226 14.0 9.0 11.5 3.5 295 chr2R 13925802 intron shot - chr2R 13925950 intron shot - chr2R 13926097 intron shot - chr2R_44_13925001 chr2R_13925001 RAL-301_125b 1713 chr2R 13942443 13942464 chr2R 13942574 13942595 13 131 7.5 10.0 8.8 1.3 152 chr2R 13942443 intergenic DJ-1alpha -,shot - chr2R 13942519 intergenic DJ-1alpha -,shot - chr2R 13942595 exon DJ-1alpha - chr2R_13_13940001 chr2R_13940001 RAL-301_125b 1714 chr2R 14037230 14037285 chr2R 14037363 14037418 12 133 6.0 11.0 8.5 1.3 188 chr2R 14037230 intron mam + chr2R 14037324 intron mam + chr2R 14037418 intron mam + chr2R_12_14035001 chr2R_14035001 RAL-301_125b 1715 chr2R 14053115 14053170 chr2R 14053244 14053299 17 123 8.5 10.0 9.2 1.7 184 chr2R 14053115 intron mam + chr2R 14053207 intron mam + chr2R 14053299 intron mam + chr2R_17_14050001 chr2R_14050001 RAL-301_125b 1716 chr2R 14054760 14054820 chr2R 14054905 14054965 20 143 9.5 6.0 7.8 2.3 205 chr2R 14054760 intron mam + chr2R 14054862 intron mam + chr2R 14054965 intron mam + chr2R_20_14050001 chr2R_14050001 RAL-301_125b 1717 chr2R 14054821 14054825 chr2R 14054904 14054970 5 130 9.5 6.0 7.8 0.6 149 chr2R 14054821 intron mam + chr2R 14054896 intron mam + chr2R 14054970 intron mam + chr2R_5_14050001 chr2R_14050001 RAL-301_125b 1718 chr2R 14093388 14093397 chr2R 14109589 14109598 6 16201 21.5 1.0 11.2 0.5 16210 chr2R 14093388 intron Prosap - chr2R 14101493 intron Prosap - chr2R 14109598 intron Prosap - chr2R_6_14100001 chr2R_14100001 RAL-301_125b 1719 chr2R 14285019 14285051 chr2R 14285152 14285184 21 133 0.0 12.5 6.2 2.9 165 chr2R 14285019 intron Ih + chr2R 14285102 intron Ih + chr2R 14285184 intron Ih + chr2R_21_14285001 chr2R_14285001 RAL-301_125b 1720 chr2R 14357506 14357577 chr2R 14357646 14357717 39 140 9.5 8.5 9.0 3.9 211 chr2R 14357506 intergenic CG8617 -,Arc1 - chr2R 14357612 intergenic Arc1 -,CG8617 - chr2R 14357717 intergenic Arc1 -,CG8617 - chr2R_39_14355001 chr2R_14355001 RAL-301_125b 1721 chr2R 14400309 14400376 chr2R 14400457 14400524 23 148 11.5 3.5 7.5 2.7 215 chr2R 14400309 intergenic not near genes chr2R 14400416 intergenic not near genes chr2R 14400524 intergenic not near genes chr2R_23_14400001 chr2R_14400001 RAL-301_125b 1722 chr2R 14423789 14423860 chr2R 14423919 14423989 18 130 10.5 8.0 9.2 1.8 200 chr2R 14423789 3` UTR CG17386 + chr2R 14423889 3` UTR CG17386 + chr2R 14423989 3` UTR CG17386 + chr2R_18_14420001 chr2R_14420001 RAL-301_125b 1723 chr2R 14436367 14436390 chr2R 14436564 14436598 6 202 0.0 3.5 1.8 2.1 231 chr2R 14436367 intron Oaz + chr2R 14436482 intron Oaz + chr2R 14436598 intron Oaz + chr2R_6_14435001 chr2R_14435001 RAL-301_125b 1724 chr2R 14457439 14457450 chr2R 14457565 14457576 7 126 0.0 4.5 2.2 2.2 137 chr2R 14457439 intron Oaz + chr2R 14457508 intron Oaz + chr2R 14457576 intron Oaz + chr2R_7_14455001 chr2R_14455001 RAL-301_125b 1725 chr2R 14467255 14467327 chr2R 14476463 14476535 roo 30 9207 6.0 8.5 7.2 3.7 9280 chr2R 14467255 intergenic not near genes chr2R 14471895 intergenic not near genes chr2R 14476535 5` UTR CR44462 + chr2R_30_14470001 chr2R_14470001 RAL-301_125b 1726 chr2R 14476720 14476781 chr2R 14476857 14476917 17 134 14.0 10.0 12.0 1.3 197 chr2R 14476720 5` UTR CR44462 + chr2R 14476818 intron CR44462 + chr2R 14476917 intron CR44462 + chr2R_17_14475001 chr2R_14475001 RAL-301_125b 1727 chr2R 14497337 14497387 chr2R 14498550 14498600 1360 16 1213 5.5 11.0 8.2 1.7 1263 chr2R 14497337 intergenic Cpsf160 -,L + chr2R 14497968 intron Cpsf160 - chr2R 14498600 3` UTR Cpsf160 - chr2R_16_14495001 chr2R_14495001 RAL-301_125b 1728 chr2R 14514439 14514500 chr2R 14514582 14514643 31 143 10.0 14.0 12.0 2.4 204 chr2R 14514439 intron,exon Cpr51A -,CG30197 + chr2R 14514541 intron,intron Cpr51A -,CG30197 + chr2R 14514643 intron,intron Cpr51A -,CG30197 + chr2R_31_14510001 chr2R_14510001 RAL-301_125b 1729 chr2R 14530327 14530380 chr2R 14530466 14530519 24 139 9.5 12.5 11.0 2.0 192 chr2R 14530327 intron ttv + chr2R 14530423 intron ttv + chr2R 14530519 intron ttv + chr2R_24_14530001 chr2R_14530001 RAL-301_125b 1730 chr2R 14530699 14530772 chr2R 14530824 14530904 30 131 6.0 7.0 6.5 4.0 205 chr2R 14530699 intron ttv + chr2R 14530802 intron ttv + chr2R 14530904 intron ttv + chr2R_30_14530001 chr2R_14530001 RAL-301_125b 1731 chr2R 14536170 14536247 chr2R 14536337 14536412 23 165 5.0 10.0 7.5 2.7 242 chr2R 14536170 intron ttv + chr2R 14536291 intron ttv + chr2R 14536412 intron ttv + chr2R_23_14535001 chr2R_14535001 RAL-301_125b 1732 chr2R 14541180 14541251 chr2R 14541487 14541558 22 307 8.5 4.0 6.2 3.1 378 chr2R 14541180 intron ttv + chr2R 14541369 intron ttv + chr2R 14541558 intron ttv + chr2R_22_14540001 chr2R_14540001 RAL-301_125b 1733 chr2R 14681847 14681922 chr2R 14681983 14682013 34 135 9.5 7.0 8.2 3.7 166 chr2R 14681847 intron mspo - chr2R 14681930 intron mspo - chr2R 14682013 intron mspo - chr2R_34_14680001 chr2R_14680001 RAL-301_125b 1734 chr2R 14699501 14699562 chr2R 14699824 14699885 25 320 8.0 10.0 9.0 2.5 384 chr2R 14699501 intron mspo - chr2R 14699693 intron mspo - chr2R 14699885 intron mspo - chr2R_25_14695001 chr2R_14695001 RAL-301_125b 1735 chr2R 14722262 14722286 chr2R 14722416 14722440 11 153 16.0 18.0 17.0 0.6 178 chr2R 14722262 intergenic not near genes chr2R 14722351 intergenic not near genes chr2R 14722440 intergenic not near genes chr2R_11_14720001 chr2R_14720001 RAL-301_125b 1736 chr2R 14733345 14733420 chr2R 14733483 14733558 17 131 5.0 9.0 7.0 2.1 213 chr2R 14733345 intergenic not near genes chr2R 14733452 intergenic not near genes chr2R 14733558 intergenic not near genes chr2R_17_14730001 chr2R_14730001 RAL-301_125b 1737 chr2R 14766694 14766760 chr2R 14766828 14766894 26 133 7.0 6.5 6.8 3.3 200 chr2R 14766694 intron Spred - chr2R 14766794 intron Spred - chr2R 14766894 intron Spred - chr2R_26_14765001 chr2R_14765001 RAL-301_125b 1738 chr2R 14772724 14772785 chr2R 14772873 14772934 31 148 11.5 6.5 9.0 3.1 210 chr2R 14772724 3` UTR kn - chr2R 14772829 3` UTR kn - chr2R 14772934 3` UTR kn - chr2R_31_14770001 chr2R_14770001 RAL-301_125b 1739 chr2R 14785977 14786051 chr2R 14786119 14786194 21 143 0.0 8.5 4.2 4.0 217 chr2R 14785977 intron kn - chr2R 14786086 intron kn - chr2R 14786194 intron kn - chr2R_21_14785001 chr2R_14785001 RAL-301_125b 1740 chr2R 14799867 14799891 chr2R 14799992 14800017 14 126 3.5 22.5 13.0 1.0 150 chr2R 14799867 intron kn - chr2R 14799942 intron kn - chr2R 14800017 intron kn - chr2R_14_14795001 chr2R_14795001 RAL-301_125b 1741 chr2R 14803427 14803505 chr2R 14803557 14803636 14 129 1.5 7.0 4.2 2.7 209 chr2R 14803427 intron kn - chr2R 14803532 intron kn - chr2R 14803636 intron kn - chr2R_14_14800001 chr2R_14800001 RAL-301_125b 1742 chr2R 14816067 14816083 chr2R 14816213 14816229 6 146 19.5 8.5 14.0 0.4 162 chr2R 14816067 intergenic not near genes chr2R 14816148 intergenic not near genes chr2R 14816229 intergenic not near genes chr2R_6_14815001 chr2R_14815001 RAL-301_125b 1743 chr2R 14816085 14816137 chr2R 14816210 14816283 25 136 8.0 8.5 8.2 2.7 198 chr2R 14816085 intergenic not near genes chr2R 14816184 intergenic not near genes chr2R 14816283 intergenic not near genes chr2R_25_14815001 chr2R_14815001 RAL-301_125b 1744 chr2R 14826350 14826385 chr2R 14826504 14826539 21 154 11.0 8.0 9.5 2.0 189 chr2R 14826350 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826539 intergenic not near genes chr2R_21_14825001 chr2R_14825001 RAL-301_125b 1745 chr2R 14854990 14855137 chr2R 14855132 14855290 10 146 0.0 0.0 0.0 10.0 300 chr2R 14854990 5` UTR Ciao1 - chr2R 14855140 intergenic Ciao1 -,HPS1 + chr2R 14855290 intergenic HPS1 +,Ciao1 - chr2R_10_14855001 chr2R_14855001 RAL-301_125b 1746 chr2R 14889168 14889240 chr2R 14897826 14897890 Max-element 20 8653 6.5 0.0 3.2 4.8 8722 chr2R 14889168 intergenic Cyp6a8 - chr2R 14893529 intergenic not near genes chr2R 14897890 intergenic not near genes chr2R_20_14890001 chr2R_14890001 RAL-301_125b 1747 chr2R 14911653 14911724 chr2R 14911824 14911897 40 172 13.0 8.5 10.8 3.4 244 chr2R 14911653 intron CG10249 - chr2R 14911775 intron CG10249 - chr2R 14911897 intron CG10249 - chr2R_40_14910001 chr2R_14910001 RAL-301_125b 1748 chr2R 14913636 14913673 chr2R 14913788 14913833 14 159 0.0 6.5 3.2 3.3 197 chr2R 14913636 intron CG10249 - chr2R 14913734 intron CG10249 - chr2R 14913833 intron CG10249 - chr2R_14_14910001 chr2R_14910001 RAL-301_125b 1749 chr2R 14914274 14914342 chr2R 14914441 14914475 18 156 8.0 1.0 4.5 3.3 201 chr2R 14914274 intron CG10249 - chr2R 14914374 intron CG10249 - chr2R 14914475 intron CG10249 - chr2R_18_14910001 chr2R_14910001 RAL-301_125b 1750 chr2R 14919034 14919109 chr2R 14919170 14919245 35 136 11.5 9.0 10.2 3.1 211 chr2R 14919034 intron CG10249 - chr2R 14919140 intron CG10249 - chr2R 14919245 intron CG10249 - chr2R_35_14915001 chr2R_14915001 RAL-301_125b 1751 chr2R 14922098 14922220 chr2R 14922224 14922407 33 200 0.0 0.0 0.0 33.0 309 chr2R 14922098 intron CG10249 - chr2R 14922252 intron CG10249 - chr2R 14922407 intron CG10249 - chr2R_33_14920001 chr2R_14920001 RAL-301_125b 1752 chr2R 14955632 14955702 chr2R 14955771 14955841 14 139 9.5 12.5 11.0 1.2 209 chr2R 14955632 intron aPKC - chr2R 14955736 intron aPKC - chr2R 14955841 intron aPKC - chr2R_14_14955001 chr2R_14955001 RAL-301_125b 1753 chr2R 14968047 14968079 chr2R 14968169 14968207 15 128 0.0 7.0 3.5 3.3 160 chr2R 14968047 intron ckn + chr2R 14968127 intron ckn + chr2R 14968207 intron ckn + chr2R_15_14965001 chr2R_14965001 RAL-301_125b 1754 chr2R 14968399 14968421 chr2R 14968531 14968540 10 131 21.5 7.5 14.5 0.6 141 chr2R 14968399 intron ckn + chr2R 14968470 intron ckn + chr2R 14968540 intron ckn + chr2R_10_14965001 chr2R_14965001 RAL-301_125b 1755 chr2R 14968425 14968447 chr2R 14968527 14968573 10 124 13.5 7.0 10.2 0.9 148 chr2R 14968425 intron ckn + chr2R 14968499 intron ckn + chr2R 14968573 intron ckn + chr2R_10_14965001 chr2R_14965001 RAL-301_125b 1756 chr2R 15004682 15004749 chr2R 15005061 15005128 jockey 19 379 9.0 5.5 7.2 2.3 446 chr2R 15004682 intergenic not near genes chr2R 15004905 intergenic not near genes chr2R 15005128 intergenic not near genes chr2R_19_15000001 chr2R_15000001 RAL-301_125b 1757 chr2R 15015415 15015423 chr2R 15022889 15022897 mdg1 4 7474 22.0 13.0 17.5 0.2 7482 chr2R 15015415 intron hbs + chr2R 15019156 intron hbs + chr2R 15022897 intron hbs + chr2R_4_15015001 chr2R_15015001 RAL-301_125b 1758 chr2R 15015424 15015482 chr2R 15022878 15022956 mdg1 29 7473 7.5 10.5 9.0 2.9 7532 chr2R 15015424 intron hbs + chr2R 15019190 intron hbs + chr2R 15022956 intron hbs + chr2R_29_15015001 chr2R_15015001 RAL-301_125b 1759 chr2R 15058149 15058208 chr2R 15058331 15058385 24 182 9.5 11.5 10.5 2.1 236 chr2R 15058149 intergenic not near genes chr2R 15058267 intergenic not near genes chr2R 15058385 intergenic not near genes chr2R_24_15055001 chr2R_15055001 RAL-301_125b 1760 chr2R 15084935 15085002 chr2R 15092034 15092100 297 24 7099 8.0 7.5 7.8 2.7 7165 chr2R 15084935 intergenic not near genes chr2R 15088518 intergenic not near genes chr2R 15092100 5` UTR CR44457 + chr2R_24_15085001 chr2R_15085001 RAL-301_125b 1761 chr2R 15119275 15119344 chr2R 15127806 15127863 Tirant 39 8528 12.0 9.5 10.8 3.3 8588 chr2R 15119275 intron chn + chr2R 15123569 intron chn + chr2R 15127863 intron chn + chr2R_39_15120001 chr2R_15120001 RAL-301_125b 1762 chr2R 15133441 15133478 chr2R 15133570 15133607 15 129 18.0 12.5 15.2 0.9 166 chr2R 15133441 intron chn + chr2R 15133524 intron chn + chr2R 15133607 intron chn + chr2R_15_15130001 chr2R_15130001 RAL-301_125b 1763 chr2R 15133480 15133506 chr2R 15133564 15133635 20 125 12.5 11.0 11.8 1.6 155 chr2R 15133480 intron chn + chr2R 15133558 intron chn + chr2R 15133635 intron chn + chr2R_20_15130001 chr2R_15130001 RAL-301_125b 1764 chr2R 15145185 15145265 chr2R 15145312 15145391 16 125 9.0 6.0 7.5 1.9 206 chr2R 15145185 exon Rpb12 - chr2R 15145288 intron Rpb12 - chr2R 15145391 exon Rpb12 - chr2R_16_15145001 chr2R_15145001 RAL-301_125b 1765 chr2R 15230368 15230393 chr2R 15230645 15230670 4 277 27.5 0.0 13.8 0.3 302 chr2R 15230368 intron,5` UTR Fs -,CR44370 + chr2R 15230519 intron,5` UTR Fs -,CR44370 + chr2R 15230670 intron,5` UTR Fs -,CR44370 + chr2R_4_15230001 chr2R_15230001 RAL-301_125b 1766 chr2R 15230356 15230364 chr2R 15231011 15231019 8 655 32.5 2.5 17.5 0.4 663 chr2R 15230356 intron,5` UTR Fs -,CR44370 + chr2R 15230688 intron,5` UTR Fs -,CR44370 + chr2R 15231019 intron,5` UTR Fs -,CR44370 + chr2R_8_15230001 chr2R_15230001 RAL-301_125b 1767 chr2R 15259023 15259080 chr2R 15259157 15259214 28 134 10.5 12.0 11.2 2.3 191 chr2R 15259023 intron ItgalphaPS4 + chr2R 15259118 intron ItgalphaPS4 + chr2R 15259214 intron ItgalphaPS4 + chr2R_28_15255001 chr2R_15255001 RAL-301_125b 1768 chr2R 15295388 15295396 chr2R 15295523 15295531 4 135 0.0 11.5 5.8 0.6 143 chr2R 15295388 intron Trpm - chr2R 15295460 intron Trpm - chr2R 15295531 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-301_125b 1769 chr2R 15296112 15296170 chr2R 15296245 15296302 22 133 9.0 8.0 8.5 2.3 190 chr2R 15296112 intron Trpm - chr2R 15296207 intron Trpm - chr2R 15296302 intron Trpm - chr2R_22_15295001 chr2R_15295001 RAL-301_125b 1770 chr2R 15308725 15308807 chr2R 15308854 15308904 41 128 5.0 6.0 5.5 6.3 179 chr2R 15308725 intron Trpm - chr2R 15308814 intron Trpm - chr2R 15308904 intron Trpm - chr2R_41_15305001 chr2R_15305001 RAL-301_125b 1771 chr2R 15340642 15340652 chr2R 15349275 15349285 Tirant 4 8633 32.5 9.5 21.0 0.2 8643 chr2R 15340642 intron unc-5 + chr2R 15344964 intron unc-5 + chr2R 15349285 intron unc-5 + chr2R_4_15340001 chr2R_15340001 RAL-301_125b 1772 chr2R 15340654 15340662 chr2R 15349287 15349295 Tirant 4 8633 30.5 12.0 21.2 0.2 8641 chr2R 15340654 intron unc-5 + chr2R 15344974 intron unc-5 + chr2R 15349295 intron unc-5 + chr2R_4_15340001 chr2R_15340001 RAL-301_125b 1773 chr2R 15375025 15375065 chr2R 15375185 15375192 12 155 9.0 0.0 4.5 2.2 167 chr2R 15375025 intergenic not near genes chr2R 15375108 intergenic not near genes chr2R 15375192 intergenic not near genes chr2R_12_15375001 chr2R_15375001 RAL-301_125b 1774 chr2R 15572970 15573024 chr2R 15573133 15573174 19 159 10.5 0.0 5.2 3.1 204 chr2R 15572970 3` UTR CG30466 + chr2R 15573072 3` UTR CG30466 + chr2R 15573174 3` UTR CG8204 - chr2R_19_15570001 chr2R_15570001 RAL-301_125b 1775 chr2R 15648912 15648985 chr2R 15649050 15649123 44 137 7.5 12.5 10.0 4.0 211 chr2R 15648912 intron CG42524 + chr2R 15649018 intron CG42524 + chr2R 15649123 intron CG42524 + chr2R_44_15645001 chr2R_15645001 RAL-301_125b 1776 chr2R 15656013 15656042 chr2R 15656154 15656183 13 141 13.0 18.0 15.5 0.8 170 chr2R 15656013 intron CG42524 + chr2R 15656098 intron CG42524 + chr2R 15656183 intron CG42524 + chr2R_13_15655001 chr2R_15655001 RAL-301_125b 1777 chr2R 15679061 15679127 chr2R 15679195 15679261 27 134 6.5 9.5 8.0 3.0 200 chr2R 15679061 intergenic CG8207 -,Vha14-1 - chr2R 15679161 intergenic CG8207 -,Vha14-1 - chr2R 15679261 intergenic Vha14-1 -,CG8207 - chr2R_27_15675001 chr2R_15675001 RAL-301_125b 1778 chr2R 15721422 15721477 chr2R 15721530 15721591 27 119 8.5 9.5 9.0 2.7 169 chr2R 15721422 intergenic not near genes chr2R 15721506 intergenic not near genes chr2R 15721591 intergenic not near genes chr2R_27_15720001 chr2R_15720001 RAL-301_125b 1779 chr2R 15794804 15794898 chr2R 15794958 15795038 19 141 0.0 0.0 0.0 19.0 234 chr2R 15794804 intron,5` UTR Zasp52 -,tun + chr2R 15794921 intron,5` UTR Zasp52 -,tun + chr2R 15795038 intron,intron Zasp52 -,tun + chr2R_19_15790001 chr2R_15790001 RAL-301_125b 1780 chr2R 15857614 15857619 chr2R 15857747 15857752 7 133 24.5 7.5 16.0 0.4 138 chr2R 15857614 intergenic CG12970 +,Gpo-1 - chr2R 15857683 intergenic Gpo-1 -,CG12970 + chr2R 15857752 3` UTR Gpo-1 - chr2R_7_15855001 chr2R_15855001 RAL-301_125b 1781 chr2R 15857620 15857689 chr2R 15857744 15857822 25 132 5.5 8.0 6.8 3.2 202 chr2R 15857620 intergenic CG12970 +,Gpo-1 - chr2R 15857721 intergenic Gpo-1 -,CG12970 + chr2R 15857822 3` UTR Gpo-1 - chr2R_25_15855001 chr2R_15855001 RAL-301_125b 1782 chr2R 15910763 15910835 chr2R 15910890 15910907 33 124 7.5 4.0 5.8 4.9 144 chr2R 15910763 intron sli - chr2R 15910835 intron sli - chr2R 15910907 intron sli - chr2R_33_15910001 chr2R_15910001 RAL-301_125b 1783 chr2R 15930337 15930417 chr2R 15930464 15930547 26 130 6.0 1.5 3.8 5.4 210 chr2R 15930337 intron bdg - chr2R 15930442 intron bdg - chr2R 15930547 intron bdg - chr2R_26_15930001 chr2R_15930001 RAL-301_125b 1784 chr2R 15987910 15987978 chr2R 15988039 15988107 24 129 9.0 9.0 9.0 2.4 197 chr2R 15987910 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988008 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988107 intron Strn-Mlck - chr2R_24_15985001 chr2R_15985001 RAL-301_125b 1785 chr2R 16059689 16059733 chr2R 16059876 16059920 24 186 15.5 9.0 12.2 1.8 231 chr2R 16059689 3` UTR CG8405 + chr2R 16059804 intron CG8405 + chr2R 16059920 3` UTR CG8405 + chr2R_24_16055001 chr2R_16055001 RAL-301_125b 1786 chr2R 16061686 16061716 chr2R 16064369 16064399 Burdock 17 2683 20.0 12.0 16.0 1.0 2713 chr2R 16061686 intergenic not near genes chr2R 16063042 intergenic not near genes chr2R 16064399 intergenic not near genes chr2R_17_16060001 chr2R_16060001 RAL-301_125b 1787 chr2R 16139165 16139232 chr2R 16139366 16139431 11 200 8.5 5.0 6.8 1.4 266 chr2R 16139165 intron Got1 + chr2R 16139298 intron Got1 + chr2R 16139431 intron Got1 + chr2R_11_16135001 chr2R_16135001 RAL-301_125b 1788 chr2R 16245363 16245430 chr2R 16245507 16245574 26 143 4.5 8.0 6.2 3.6 211 chr2R 16245363 intron CngA - chr2R 16245468 intron CngA - chr2R 16245574 intron CngA - chr2R_26_16245001 chr2R_16245001 RAL-301_125b 1789 chr2R 16255036 16255044 chr2R 16255178 16255186 7 142 0.0 5.5 2.8 1.8 150 chr2R 16255036 intron CngA - chr2R 16255111 intron CngA - chr2R 16255186 intron CngA - chr2R_7_16255001 chr2R_16255001 RAL-301_125b 1790 chr2R 16352796 16352865 chr2R 16352926 16352998 32 133 6.5 6.5 6.5 4.3 202 chr2R 16352796 intergenic not near genes chr2R 16352897 intergenic not near genes chr2R 16352998 intergenic not near genes chr2R_32_16350001 chr2R_16350001 RAL-301_125b 1791 chr2R 16389286 16389341 chr2R 16389419 16389475 7 133 0.0 12.5 6.2 1.0 189 chr2R 16389286 intron Sema-2b + chr2R 16389380 intron Sema-2b + chr2R 16389475 intron Sema-2b + chr2R_7_16385001 chr2R_16385001 RAL-301_125b 1792 chr2R 16517996 16518074 chr2R 16518122 16518200 24 124 9.0 9.0 9.0 2.4 204 chr2R 16517996 intron Sema-2a + chr2R 16518098 intron Sema-2a + chr2R 16518200 intron Sema-2a + chr2R_24_16515001 chr2R_16515001 RAL-301_125b 1793 chr2R 16539601 16539658 chr2R 16544858 16544947 copia 11 5269 9.5 0.0 4.8 1.9 5346 chr2R 16539601 intergenic not near genes chr2R 16542274 intergenic not near genes chr2R 16544947 intergenic not near genes chr2R_11_16540001 chr2R_16540001 RAL-301_125b 1794 chr2R 16544860 16544873 chr2R 16544995 16545008 5 135 0.0 2.5 1.2 2.3 148 chr2R 16544860 intergenic not near genes chr2R 16544934 intergenic not near genes chr2R 16545008 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-301_125b 1795 chr2R 16600091 16600122 chr2R 16600319 16600350 9 228 15.5 6.5 11.0 0.8 259 chr2R 16600091 intron,exon CG8303 -,CG5089 + chr2R 16600220 intron,exon CG8303 -,CG5089 + chr2R 16600350 intron,3` UTR CG8303 -,CG5089 + chr2R_9_16600001 chr2R_16600001 RAL-301_125b 1796 chr2R 16600123 16600162 chr2R 16600316 16600339 13 221 7.0 6.0 6.5 1.7 216 chr2R 16600123 intron,exon CG8303 -,CG5089 + chr2R 16600231 intron,exon CG8303 -,CG5089 + chr2R 16600339 intron,3` UTR CG8303 -,CG5089 + chr2R_13_16600001 chr2R_16600001 RAL-301_125b 1797 chr2R 16617057 16617068 chr2R 16617181 16617198 6 129 10.0 16.5 13.2 0.4 141 chr2R 16617057 intron CG5065 + chr2R 16617128 intron CG5065 + chr2R 16617198 intron CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-301_125b 1798 chr2R 16617069 16617090 chr2R 16617178 16617205 11 127 8.5 16.0 12.2 0.8 136 chr2R 16617069 intron CG5065 + chr2R 16617137 intron CG5065 + chr2R 16617205 intron CG5065 + chr2R_11_16615001 chr2R_16615001 RAL-301_125b 1799 chr2R 16618699 16618745 chr2R 16618825 16618856 17 125 2.5 12.0 7.2 2.1 157 chr2R 16618699 intron CG5065 + chr2R 16618778 intron CG5065 + chr2R 16618856 5` UTR CG5065 + chr2R_17_16615001 chr2R_16615001 RAL-301_125b 1800 chr2R 16682033 16682106 chr2R 16682264 16682337 36 231 11.0 6.5 8.8 3.7 304 chr2R 16682033 intron CG30463 - chr2R 16682185 intron CG30463 - chr2R 16682337 intron CG30463 - chr2R_36_16680001 chr2R_16680001 RAL-301_125b 1801 chr2R 16686820 16686890 chr2R 16686960 16687030 27 140 8.0 7.0 7.5 3.2 210 chr2R 16686820 intron CG30463 - chr2R 16686925 intron CG30463 - chr2R 16687030 intron CG30463 - chr2R_27_16685001 chr2R_16685001 RAL-301_125b 1802 chr2R 16690463 16690479 chr2R 16690595 16690611 4 132 3.5 6.0 4.8 0.7 148 chr2R 16690463 intron CG30463 - chr2R 16690537 intron CG30463 - chr2R 16690611 intron CG30463 - chr2R_4_16690001 chr2R_16690001 RAL-301_125b 1803 chr2R 16713056 16713064 chr2R 16713189 16713197 4 133 0.0 17.0 8.5 0.4 141 chr2R 16713056 intron CG30463 - chr2R 16713126 intron CG30463 - chr2R 16713197 intron CG30463 - chr2R_4_16710001 chr2R_16710001 RAL-301_125b 1804 chr2R 16726629 16726688 chr2R 16726778 16726837 24 149 8.5 11.5 10.0 2.2 208 chr2R 16726629 intron CG30463 - chr2R 16726733 intron CG30463 - chr2R 16726837 intron CG30463 - chr2R_24_16725001 chr2R_16725001 RAL-301_125b 1805 chr2R 16737089 16737096 chr2R 16737239 16737246 7 150 18.0 6.5 12.2 0.5 157 chr2R 16737089 3` UTR CG43104 - chr2R 16737168 3` UTR CG43104 - chr2R 16737246 exon CG43104 - chr2R_7_16735001 chr2R_16735001 RAL-301_125b 1806 chr2R 16737097 16737163 chr2R 16737237 16737271 25 145 6.5 6.0 6.2 3.5 174 chr2R 16737097 3` UTR CG43104 - chr2R 16737184 3` UTR CG43104 - chr2R 16737271 exon CG43104 - chr2R_25_16735001 chr2R_16735001 RAL-301_125b 1807 chr2R 16739434 16739443 chr2R 16739567 16739576 7 133 14.5 0.0 7.2 0.9 142 chr2R 16739434 intergenic not near genes chr2R 16739505 intergenic not near genes chr2R 16739576 intergenic not near genes chr2R_7_16735001 chr2R_16735001 RAL-301_125b 1808 chr2R 16775595 16775664 chr2R 16775909 16775978 37 314 8.0 7.0 7.5 4.4 383 chr2R 16775595 3` UTR Arp53D + chr2R 16775786 intergenic Arp53D + chr2R 16775978 intergenic Arp53D + chr2R_37_16775001 chr2R_16775001 RAL-301_125b 1809 chr2R 16787424 16787499 chr2R 16787556 16787631 35 131 6.5 8.0 7.2 4.3 207 chr2R 16787424 intron CG5522 + chr2R 16787528 intron CG5522 + chr2R 16787631 intron CG5522 + chr2R_35_16785001 chr2R_16785001 RAL-301_125b 1810 chr2R 16800056 16800073 chr2R 16800187 16800204 10 131 0.0 14.0 7.0 1.2 148 chr2R 16800056 intergenic not near genes chr2R 16800130 intergenic not near genes chr2R 16800204 intergenic not near genes chr2R_10_16800001 chr2R_16800001 RAL-301_125b 1811 chr2R 16892269 16892314 chr2R 16892411 16892456 15 142 6.0 12.0 9.0 1.5 187 chr2R 16892269 intron CG8910 - chr2R 16892362 intron CG8910 - chr2R 16892456 intron CG8910 - chr2R_15_16890001 chr2R_16890001 RAL-301_125b 1812 chr2R 16893727 16893803 chr2R 16893860 16893936 30 133 9.0 5.5 7.2 3.7 209 chr2R 16893727 intron CG8910 - chr2R 16893832 intron CG8910 - chr2R 16893936 intron CG8910 - chr2R_30_16890001 chr2R_16890001 RAL-301_125b 1813 chr2R 16915201 16915254 chr2R 16915325 16915391 27 136 7.0 7.0 7.0 3.4 190 chr2R 16915201 intergenic not near genes chr2R 16915296 intergenic not near genes chr2R 16915391 intergenic not near genes chr2R_27_16915001 chr2R_16915001 RAL-301_125b 1814 chr2R 16920443 16920466 chr2R 16920566 16920599 16 132 6.0 14.5 10.2 1.4 156 chr2R 16920443 intergenic not near genes chr2R 16920521 intergenic not near genes chr2R 16920599 intergenic not near genes chr2R_16_16920001 chr2R_16920001 RAL-301_125b 1815 chr2R 16975153 16975223 chr2R 16975280 16975350 40 126 7.0 11.5 9.2 3.9 197 chr2R 16975153 intron Cbp53E + chr2R 16975252 intron Cbp53E + chr2R 16975350 intron Cbp53E + chr2R_40_16975001 chr2R_16975001 RAL-301_125b 1816 chr2R 17139355 17139406 chr2R 17139545 17139596 15 190 4.0 8.0 6.0 2.1 241 chr2R 17139355 3` UTR CG11395 + chr2R 17139476 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139596 3` UTR CG43103 - chr2R_15_17135001 chr2R_17135001 RAL-301_125b 1817 chr2R 17147202 17147261 chr2R 17152283 17152335 jockey 19 5081 12.0 14.0 13.0 1.4 5133 chr2R 17147202 intergenic not near genes chr2R 17149768 intergenic not near genes chr2R 17152335 intergenic not near genes chr2R_19_17145001 chr2R_17145001 RAL-301_125b 1818 chr2R 17161305 17161364 chr2R 17161562 17161618 18 253 10.0 2.5 6.2 2.5 313 chr2R 17161305 intergenic CG30457 - chr2R 17161462 intergenic not near genes chr2R 17161618 intergenic not near genes chr2R_18_17160001 chr2R_17160001 RAL-301_125b 1819 chr2R 17176355 17176379 chr2R 17182595 17182619 diver 19 6240 0.0 18.5 9.2 1.9 6264 chr2R 17176355 intergenic not near genes chr2R 17179487 intergenic not near genes chr2R 17182619 intergenic not near genes chr2R_19_17175001 chr2R_17175001 RAL-301_125b 1820 chr2R 17226396 17226464 chr2R 17226783 17226858 30 392 7.5 11.0 9.2 2.9 462 chr2R 17226396 intron mbl + chr2R 17226627 intron mbl + chr2R 17226858 intron mbl + chr2R_30_17225001 chr2R_17225001 RAL-301_125b 1821 chr2R 17236470 17236527 chr2R 17241719 17241762 copia 25 5252 8.5 8.5 8.5 2.6 5292 chr2R 17236470 intron mbl + chr2R 17239116 intron mbl + chr2R 17241762 intron mbl + chr2R_25_17235001 chr2R_17235001 RAL-301_125b 1822 chr2R 17263270 17263327 chr2R 17263401 17263457 24 131 5.5 10.0 7.8 2.7 187 chr2R 17263270 intron mbl + chr2R 17263364 intron mbl + chr2R 17263457 intron mbl + chr2R_24_17260001 chr2R_17260001 RAL-301_125b 1823 chr2R 17359861 17359873 chr2R 17360002 17360014 5 141 4.0 5.5 4.8 0.9 153 chr2R 17359861 intron mbl + chr2R 17359938 intron mbl + chr2R 17360014 intron mbl + chr2R_5_17355001 chr2R_17355001 RAL-301_125b 1824 chr2R 17389228 17389303 chr2R 17389369 17389394 25 134 9.5 8.5 9.0 2.5 166 chr2R 17389228 intergenic CR44344 - chr2R 17389311 intergenic CR44344 - chr2R 17389394 intergenic CR44344 - chr2R_25_17385001 chr2R_17385001 RAL-301_125b 1825 chr2R 17419887 17419964 chr2R 17420018 17420092 20 129 2.5 10.0 6.2 2.8 205 chr2R 17419887 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420092 intergenic cnk -,l(2)k01209 + chr2R_20_17415001 chr2R_17415001 RAL-301_125b 1826 chr2R 17458969 17459029 chr2R 17459104 17459164 25 135 8.0 10.5 9.2 2.5 195 chr2R 17458969 intron CG14478 + chr2R 17459066 intron CG14478 + chr2R 17459164 intron CG14478 + chr2R_25_17455001 chr2R_17455001 RAL-301_125b 1827 chr2R 17470273 17470355 chr2R 17470403 17470485 37 130 10.0 4.0 7.0 4.6 212 chr2R 17470273 intron qkr54B + chr2R 17470379 intron qkr54B + chr2R 17470485 intron qkr54B + chr2R_37_17470001 chr2R_17470001 RAL-301_125b 1828 chr2R 17485875 17485947 chr2R 17490687 17490757 F-element 29 4810 7.5 8.5 8.0 3.2 4882 chr2R 17485875 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488316 intron NT5E-2 + chr2R 17490757 intron NT5E-2 + chr2R_29_17485001 chr2R_17485001 RAL-301_125b 1829 chr2R 17519213 17519256 chr2R 17519332 17519333 14 123 8.0 13.5 10.8 1.2 120 chr2R 17519213 3` UTR Patronin - chr2R 17519273 3` UTR Patronin - chr2R 17519333 3` UTR Patronin - chr2R_14_17515001 chr2R_17515001 RAL-301_125b 1830 chr2R 17556389 17556460 chr2R 17556525 17556595 32 135 8.5 4.5 6.5 4.3 206 chr2R 17556389 intergenic MESR4 + chr2R 17556492 intergenic MESR4 + chr2R 17556595 intergenic MESR4 +,Klp54D + chr2R_32_17555001 chr2R_17555001 RAL-301_125b 1831 chr2R 17645031 17645048 chr2R 17645627 17645644 9 596 16.0 0.0 8.0 1.0 613 chr2R 17645031 intergenic not near genes chr2R 17645338 intergenic not near genes chr2R 17645644 intergenic not near genes chr2R_9_17645001 chr2R_17645001 RAL-301_125b 1832 chr2R 17657282 17657350 chr2R 17657430 17657498 34 147 6.0 5.5 5.8 5.0 216 chr2R 17657282 intron CCHa1-R - chr2R 17657390 intron CCHa1-R - chr2R 17657498 intron CCHa1-R - chr2R_34_17655001 chr2R_17655001 RAL-301_125b 1833 chr2R 17679571 17679600 chr2R 17679748 17679777 15 177 2.0 15.5 8.8 1.5 206 chr2R 17679571 intron Sema-1b - chr2R 17679674 intron Sema-1b - chr2R 17679777 intron Sema-1b - chr2R_15_17675001 chr2R_17675001 RAL-301_125b 1834 chr2R 17708344 17708403 chr2R 17708475 17708534 16 131 9.0 11.0 10.0 1.5 190 chr2R 17708344 intron CG6424 - chr2R 17708439 intron CG6424 - chr2R 17708534 intron CG6424 - chr2R_16_17705001 chr2R_17705001 RAL-301_125b 1835 chr2R 17782316 17782393 chr2R 17783569 17783646 pogo 37 1253 9.0 5.5 7.2 4.5 1330 chr2R 17782316 intergenic CG33981 -,fab1 - chr2R 17782981 intergenic not near genes chr2R 17783646 intergenic mir-31a - chr2R_37_17780001 chr2R_17780001 RAL-301_125b 1836 chr2R 17783981 17784057 chr2R 17784272 17784277 pogo 36 289 10.0 14.0 12.0 2.8 296 chr2R 17783981 intergenic mir-31a - chr2R 17784129 intergenic mir-31a - chr2R 17784277 intergenic mir-31a - chr2R_36_17780001 chr2R_17780001 RAL-301_125b 1837 chr2R 17785037 17785102 chr2R 17785175 17785217 16 135 8.0 10.5 9.2 1.6 180 chr2R 17785037 intergenic not near genes chr2R 17785127 intergenic not near genes chr2R 17785217 intergenic not near genes chr2R_16_17785001 chr2R_17785001 RAL-301_125b 1838 chr2R 17793294 17793345 chr2R 17793489 17793540 12 191 18.5 20.0 19.2 0.6 246 chr2R 17793294 5` UTR Dhit + chr2R 17793417 5` UTR Dhit + chr2R 17793540 5` UTR Dhit + chr2R_12_17790001 chr2R_17790001 RAL-301_125b 1839 chr2R 17798389 17798414 chr2R 17798903 17798936 297 9 523 10.5 12.0 11.2 0.7 547 chr2R 17798389 intron Dhit + chr2R 17798662 intron Dhit + chr2R 17798936 intron Dhit + chr2R_9_17795001 chr2R_17795001 RAL-301_125b 1840 chr2R 17834990 17835002 chr2R 17835132 17835136 6 141 10.5 10.0 10.2 0.5 146 chr2R 17834990 intron grh + chr2R 17835063 intron grh + chr2R 17835136 intron grh + chr2R_6_17835001 chr2R_17835001 RAL-301_125b 1841 chr2R 17835006 17835046 chr2R 17835128 17835190 24 137 7.5 8.0 7.8 2.7 184 chr2R 17835006 intron grh + chr2R 17835098 intron grh + chr2R 17835190 intron grh + chr2R_24_17835001 chr2R_17835001 RAL-301_125b 1842 chr2R 17843168 17843236 chr2R 17843306 17843374 13 137 0.0 6.0 3.0 3.2 206 chr2R 17843168 intergenic olf186-F + chr2R 17843271 intergenic olf186-F + chr2R 17843374 intergenic olf186-F + chr2R_13_17840001 chr2R_17840001 RAL-301_125b 1843 chr2R 17849744 17849825 chr2R 17849959 17850032 26 211 0.0 4.5 2.2 8.1 288 chr2R 17849744 intron olf186-F + chr2R 17849888 intron olf186-F + chr2R 17850032 intron olf186-F + chr2R_26_17845001 chr2R_17845001 RAL-301_125b 1844 chr2R 17872872 17872941 chr2R 17873280 17873349 37 407 4.5 11.0 7.8 4.2 477 chr2R 17872872 intergenic not near genes chr2R 17873110 intergenic not near genes chr2R 17873349 intergenic not near genes chr2R_37_17870001 chr2R_17870001 RAL-301_125b 1845 chr2R 17885067 17885141 chr2R 17885212 17885283 20 141 7.0 8.0 7.5 2.4 216 chr2R 17885067 intron Elk + chr2R 17885175 intron Elk + chr2R 17885283 intron Elk + chr2R_20_17885001 chr2R_17885001 RAL-301_125b 1846 chr2R 17898717 17898771 chr2R 17898856 17898910 21 138 6.5 12.5 9.5 2.0 193 chr2R 17898717 intron Elk + chr2R 17898814 intron Elk + chr2R 17898910 intron Elk + chr2R_21_17895001 chr2R_17895001 RAL-301_125b 1847 chr2R 17921406 17921454 chr2R 17921538 17921586 19 132 0.5 13.5 7.0 2.4 180 chr2R 17921406 intron Elk + chr2R 17921496 intron Elk + chr2R 17921586 intron Elk + chr2R_19_17920001 chr2R_17920001 RAL-301_125b 1848 chr2R 17961443 17961455 chr2R 17961578 17961590 6 135 6.5 0.0 3.2 1.4 147 chr2R 17961443 intergenic not near genes chr2R 17961516 intergenic not near genes chr2R 17961590 intergenic not near genes chr2R_6_17960001 chr2R_17960001 RAL-301_125b 1849 chr2R 17963275 17963295 chr2R 17963458 17963478 9 183 11.0 11.0 11.0 0.8 203 chr2R 17963275 intergenic not near genes chr2R 17963376 intergenic not near genes chr2R 17963478 intergenic not near genes chr2R_9_17960001 chr2R_17960001 RAL-301_125b 1850 chr2R 17966103 17966172 chr2R 17966231 17966303 19 127 4.0 6.5 5.2 3.1 200 chr2R 17966103 intergenic not near genes chr2R 17966203 intergenic not near genes chr2R 17966303 intergenic not near genes chr2R_19_17965001 chr2R_17965001 RAL-301_125b 1851 chr2R 17984628 17984656 chr2R 17984760 17984788 6 132 9.0 7.5 8.2 0.7 160 chr2R 17984628 intron dpr13 - chr2R 17984708 intron dpr13 - chr2R 17984788 intron dpr13 - chr2R_6_17980001 chr2R_17980001 RAL-301_125b 1852 chr2R 17997121 17997188 chr2R 17997253 17997320 26 131 8.0 7.0 7.5 3.1 199 chr2R 17997121 intron dpr13 - chr2R 17997220 intron dpr13 - chr2R 17997320 intron dpr13 - chr2R_26_17995001 chr2R_17995001 RAL-301_125b 1853 chr2R 18003174 18003227 chr2R 18003301 18003349 18 122 15.0 12.5 13.8 1.2 175 chr2R 18003174 intron dpr13 - chr2R 18003262 intron dpr13 - chr2R 18003349 intron dpr13 - chr2R_18_18000001 chr2R_18000001 RAL-301_125b 1854 chr2R 18045632 18045688 chr2R 18046034 18046090 jockey 22 402 8.5 13.0 10.8 1.9 458 chr2R 18045632 intergenic not near genes chr2R 18045861 intergenic not near genes chr2R 18046090 intergenic CG5767 - chr2R_22_18045001 chr2R_18045001 RAL-301_125b 1855 chr2R 18073816 18073894 chr2R 18073950 18074028 31 132 8.5 6.0 7.2 3.8 212 chr2R 18073816 intron CG34386 + chr2R 18073922 intron CG34386 + chr2R 18074028 intron CG34386 + chr2R_31_18070001 chr2R_18070001 RAL-301_125b 1856 chr2R 18111634 18111644 chr2R 18115552 18115562 F-element 4 3918 21.0 12.0 16.5 0.2 3928 chr2R 18111634 intergenic not near genes chr2R 18113598 intergenic not near genes chr2R 18115562 intergenic not near genes chr2R_4_18110001 chr2R_18110001 RAL-301_125b 1857 chr2R 18111645 18111704 chr2R 18115551 18115622 F-element 18 3916 8.5 12.0 10.2 1.6 3977 chr2R 18111645 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115622 intergenic not near genes chr2R_18_18110001 chr2R_18110001 RAL-301_125b 1858 chr2R 18197024 18197097 chr2R 18197152 18197225 39 128 8.0 10.5 9.2 3.8 201 chr2R 18197024 intergenic not near genes chr2R 18197124 intergenic not near genes chr2R 18197225 intergenic not near genes chr2R_39_18195001 chr2R_18195001 RAL-301_125b 1859 chr2R 18308246 18308318 chr2R 18308402 18308474 24 156 6.0 8.5 7.2 2.9 228 chr2R 18308246 intron sbb - chr2R 18308360 intron sbb - chr2R 18308474 intron sbb - chr2R_24_18305001 chr2R_18305001 RAL-301_125b 1860 chr2R 18318329 18318343 chr2R 18318460 18318474 9 131 1.5 0.0 0.8 5.0 145 chr2R 18318329 intron sbb - chr2R 18318402 intron sbb - chr2R 18318474 intron sbb - chr2R_9_18315001 chr2R_18315001 RAL-301_125b 1861 chr2R 18358347 18358377 chr2R 18372609 18372622 roo 9 14260 17.5 0.0 8.8 0.9 14275 chr2R 18358347 intergenic not near genes chr2R 18365484 intergenic not near genes chr2R 18372622 intergenic not near genes chr2R_9_18365001 chr2R_18365001 RAL-301_125b 1862 chr2R 18398124 18398188 chr2R 18398268 18398332 26 143 7.5 2.0 4.8 4.5 208 chr2R 18398124 intron GstE10 - chr2R 18398228 intron GstE10 - chr2R 18398332 intron GstE10 - chr2R_26_18395001 chr2R_18395001 RAL-301_125b 1863 chr2R 18398679 18398683 chr2R 18402515 18402520 4 3834 31.0 18.5 24.8 0.2 3841 chr2R 18398679 exon GstE1 + chr2R 18400600 intergenic GstE3 +,GstE2 + chr2R 18402520 intergenic not near genes chr2R_4_18400001 chr2R_18400001 RAL-301_125b 1864 chr2R 18405731 18405784 chr2R 18405835 18405914 16 128 6.0 8.0 7.0 2.0 183 chr2R 18405731 intergenic GstE6 +,GstE5 + chr2R 18405822 intergenic GstE6 +,GstE5 + chr2R 18405914 intergenic GstE6 + chr2R_16_18405001 chr2R_18405001 RAL-301_125b 1865 chr2R 18480477 18480486 chr2R 18480634 18480643 4 157 0.0 0.0 0.0 4.0 166 chr2R 18480477 intron CG30116 - chr2R 18480560 intron CG30116 - chr2R 18480643 intron CG30116 - chr2R_4_18480001 chr2R_18480001 RAL-301_125b 1866 chr2R 18487790 18487849 chr2R 18495291 18495318 blood 17 7499 3.5 7.5 5.5 2.6 7528 chr2R 18487790 intron CG30116 - chr2R 18491554 intron CG30116 - chr2R 18495318 intron CG30116 - chr2R_17_18490001 chr2R_18490001 RAL-301_125b 1867 chr2R 18511534 18511615 chr2R 18511674 18511751 19 136 6.0 4.0 5.0 3.2 217 chr2R 18511534 intergenic not near genes chr2R 18511642 intergenic not near genes chr2R 18511751 intergenic not near genes chr2R_19_18510001 chr2R_18510001 RAL-301_125b 1868 chr2R 18550530 18550605 chr2R 18550669 18550744 25 137 7.0 8.0 7.5 2.9 214 chr2R 18550530 intergenic not near genes chr2R 18550637 intergenic not near genes chr2R 18550744 intergenic not near genes chr2R_25_18550001 chr2R_18550001 RAL-301_125b 1869 chr2R 18575773 18575783 chr2R 18581998 18582021 3S18 6 6234 20.0 11.5 15.8 0.4 6248 chr2R 18575773 intron GEFmeso - chr2R 18578897 intron GEFmeso - chr2R 18582021 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-301_125b 1870 chr2R 18575791 18575810 chr2R 18581994 18582032 3S18 9 6218 14.5 10.0 12.2 0.7 6241 chr2R 18575791 intron GEFmeso - chr2R 18578912 intron GEFmeso - chr2R 18582032 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 RAL-301_125b 1871 chr2R 18575811 18575824 chr2R 18581984 18582054 3S18 18 6216 9.5 7.5 8.5 1.9 6243 chr2R 18575811 intron GEFmeso - chr2R 18578932 intron GEFmeso - chr2R 18582054 intron GEFmeso - chr2R_18_18575001 chr2R_18575001 RAL-301_125b 1872 chr2R 18590822 18590895 chr2R 18600024 18600074 roo 28 9197 3.5 11.5 7.5 3.3 9252 chr2R 18590822 intron GEFmeso - chr2R 18595448 intron GEFmeso - chr2R 18600074 intron GEFmeso - chr2R_28_18595001 chr2R_18595001 RAL-301_125b 1873 chr2R 18600501 18600551 chr2R 18600622 18600648 12 113 9.5 0.5 5.0 2.0 147 chr2R 18600501 intron GEFmeso - chr2R 18600574 intron GEFmeso - chr2R 18600648 intron GEFmeso - chr2R_12_18600001 chr2R_18600001 RAL-301_125b 1874 chr2R 18678484 18678504 chr2R 18678654 18678674 13 170 18.0 0.0 9.0 1.3 190 chr2R 18678484 intergenic CG44434 -,CG44435 - chr2R 18678579 intergenic CG44434 -,CG44435 - chr2R 18678674 intergenic CG44434 -,CG44435 - chr2R_13_18675001 chr2R_18675001 RAL-301_125b 1875 chr2R 18692850 18692921 chr2R 18692987 18693057 23 135 6.0 4.0 5.0 3.8 207 chr2R 18692850 exon Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693057 intron Sik3 + chr2R_23_18690001 chr2R_18690001 RAL-301_125b 1876 chr2R 18715151 18715231 chr2R 18715280 18715350 27 127 6.5 3.5 5.0 4.5 199 chr2R 18715151 intergenic not near genes chr2R 18715250 intergenic not near genes chr2R 18715350 intergenic not near genes chr2R_27_18715001 chr2R_18715001 RAL-301_125b 1877 chr2R 18732819 18732828 chr2R 18732950 18732959 4 131 0.0 7.5 3.8 0.8 140 chr2R 18732819 intron Hs3st-A + chr2R 18732889 intron Hs3st-A + chr2R 18732959 intron Hs3st-A + chr2R_4_18730001 chr2R_18730001 RAL-301_125b 1878 chr2R 18745028 18745099 chr2R 18745183 18745254 21 154 7.0 7.5 7.2 2.6 226 chr2R 18745028 intron Hs3st-A + chr2R 18745141 intron Hs3st-A + chr2R 18745254 intron Hs3st-A + chr2R_21_18745001 chr2R_18745001 RAL-301_125b 1879 chr2R 18752565 18752609 chr2R 18752693 18752726 12 128 7.0 18.5 12.8 0.9 161 chr2R 18752565 3` UTR Hs3st-A + chr2R 18752646 3` UTR Hs3st-A + chr2R 18752726 3` UTR Hs3st-A + chr2R_12_18750001 chr2R_18750001 RAL-301_125b 1880 chr2R 18769606 18769731 chr2R 18769917 18769988 10 306 0.0 10.0 5.0 1.7 382 chr2R 18769606 intron Mctp + chr2R 18769797 intron Mctp + chr2R 18769988 intron Mctp + chr2R_10_18765001 chr2R_18765001 RAL-301_125b 1881 chr2R 18808019 18808085 chr2R 18808158 18808224 8 139 0.0 0.0 0.0 8.0 205 chr2R 18808019 intergenic CG15096 - chr2R 18808122 intergenic CG15096 - chr2R 18808224 intergenic CG15096 - chr2R_8_18805001 chr2R_18805001 RAL-301_125b 1882 chr2R 18953115 18953191 chr2R 18953252 18953318 41 137 7.0 11.0 9.0 4.1 203 chr2R 18953115 intron sano + chr2R 18953216 intron sano + chr2R 18953318 intron sano + chr2R_41_18950001 chr2R_18950001 RAL-301_125b 1883 chr2R 18991978 18992045 chr2R 18992169 18992236 29 189 11.0 8.0 9.5 2.8 258 chr2R 18991978 intron tn + chr2R 18992107 intron tn + chr2R 18992236 intron tn + chr2R_29_18990001 chr2R_18990001 RAL-301_125b 1884 chr2R 19010700 19010773 chr2R 19010862 19010908 22 157 7.0 7.0 7.0 2.8 208 chr2R 19010700 intergenic not near genes chr2R 19010804 intergenic not near genes chr2R 19010908 intergenic not near genes chr2R_22_19010001 chr2R_19010001 RAL-301_125b 1885 chr2R 19012917 19012963 chr2R 19013035 19013107 24 142 3.0 6.5 4.8 4.1 190 chr2R 19012917 intergenic not near genes chr2R 19013012 intergenic not near genes chr2R 19013107 intergenic not near genes chr2R_24_19010001 chr2R_19010001 RAL-301_125b 1886 chr2R 19026002 19026054 chr2R 19026153 19026205 12 150 11.0 3.0 7.0 1.5 203 chr2R 19026002 exon 5-HT1B - chr2R 19026104 intron 5-HT1B - chr2R 19026205 intron 5-HT1B - chr2R_12_19025001 chr2R_19025001 RAL-301_125b 1887 chr2R 19168693 19168766 chr2R 19168824 19168899 24 132 4.0 8.0 6.0 3.4 206 chr2R 19168693 intron CG10737 + chr2R 19168796 intron CG10737 + chr2R 19168899 intron CG10737 + chr2R_24_19165001 chr2R_19165001 RAL-301_125b 1888 chr2R 19209522 19209580 chr2R 19209776 19209834 28 252 10.5 11.5 11.0 2.3 312 chr2R 19209522 intron hppy + chr2R 19209678 intron hppy + chr2R 19209834 intron hppy + chr2R_28_19205001 chr2R_19205001 RAL-301_125b 1889 chr2R 19357254 19357286 chr2R 19357397 19357429 16 142 15.5 4.5 10.0 1.5 175 chr2R 19357254 intergenic CG11961 + chr2R 19357342 intergenic CG11961 + chr2R 19357429 intergenic CG11961 + chr2R_16_19355001 chr2R_19355001 RAL-301_125b 1890 chr2R 19357290 19357347 chr2R 19357433 19357484 9 138 5.0 13.5 9.2 0.9 194 chr2R 19357290 intergenic CG11961 + chr2R 19357387 intergenic CG11961 + chr2R 19357484 intergenic CG11961 + chr2R_9_19355001 chr2R_19355001 RAL-301_125b 1891 chr2R 19376086 19376116 chr2R 19376329 19376359 7 243 16.0 9.5 12.8 0.5 273 chr2R 19376086 intron CG10062 + chr2R 19376222 intron CG10062 + chr2R 19376359 intron CG10062 + chr2R_7_19375001 chr2R_19375001 RAL-301_125b 1892 chr2R 19546172 19546245 chr2R 19546299 19546372 31 127 6.5 0.0 3.2 7.4 200 chr2R 19546172 intron sm - chr2R 19546272 intron sm - chr2R 19546372 intron sm - chr2R_31_19545001 chr2R_19545001 RAL-301_125b 1893 chr2R 19582889 19582960 chr2R 19583229 19583301 15 340 6.5 9.0 7.8 1.7 412 chr2R 19582889 intron sm - chr2R 19583095 intron sm - chr2R 19583301 intron sm - chr2R_15_19580001 chr2R_19580001 RAL-301_125b 1894 chr2R 19603918 19604002 chr2R 19604057 19604136 20 137 1.0 6.0 3.5 4.4 218 chr2R 19603918 intron sm - chr2R 19604027 intron sm - chr2R 19604136 intron sm - chr2R_20_19600001 chr2R_19600001 RAL-301_125b 1895 chr2R 19714691 19714732 chr2R 19714817 19714858 25 126 2.0 16.0 9.0 2.5 167 chr2R 19714691 3` UTR CG8517 + chr2R 19714774 3` UTR CG8517 + chr2R 19714858 3` UTR CG8517 + chr2R_25_19710001 chr2R_19710001 RAL-301_125b 1896 chr2R 19715811 19715857 chr2R 19723330 19723376 blood 17 7519 12.0 10.5 11.2 1.4 7565 chr2R 19715811 intergenic not near genes chr2R 19719594 intergenic not near genes chr2R 19723376 intergenic not near genes chr2R_17_19715001 chr2R_19715001 RAL-301_125b 1897 chr2R 19773967 19774033 chr2R 19774130 19774196 22 163 10.0 7.0 8.5 2.3 229 chr2R 19773967 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774196 intergenic not near genes chr2R_22_19770001 chr2R_19770001 RAL-301_125b 1898 chr2R 19776564 19776574 chr2R 19779937 19779947 jockey 7 3373 20.0 10.5 15.2 0.4 3383 chr2R 19776564 intergenic not near genes chr2R 19778256 intergenic not near genes chr2R 19779947 intergenic not near genes chr2R_7_19775001 chr2R_19775001 RAL-301_125b 1899 chr2R 19776578 19776622 chr2R 19779923 19779964 jockey 21 3370 10.5 9.0 9.8 1.9 3386 chr2R 19776578 intergenic not near genes chr2R 19778271 intergenic not near genes chr2R 19779964 intergenic not near genes chr2R_21_19775001 chr2R_19775001 RAL-301_125b 1900 chr2R 19784535 19784606 chr2R 19784682 19784752 32 147 7.0 9.0 8.0 3.6 217 chr2R 19784535 5` UTR CR45231 + chr2R 19784644 5` UTR CR45231 + chr2R 19784752 5` UTR CR45231 + chr2R_32_19780001 chr2R_19780001 RAL-301_125b 1901 chr2R 19804381 19804414 chr2R 19804536 19804545 8 148 8.5 17.5 13.0 0.6 164 chr2R 19804381 intergenic not near genes chr2R 19804463 intergenic not near genes chr2R 19804545 intergenic not near genes chr2R_8_19800001 chr2R_19800001 RAL-301_125b 1902 chr2R 19837664 19837735 chr2R 19837813 19837884 27 149 10.5 13.0 11.8 2.1 220 chr2R 19837664 intergenic not near genes chr2R 19837774 intergenic not near genes chr2R 19837884 intergenic not near genes chr2R_27_19835001 chr2R_19835001 RAL-301_125b 1903 chr2R 19845035 19845106 chr2R 19845166 19845237 26 130 7.5 10.0 8.8 2.7 202 chr2R 19845035 intergenic not near genes chr2R 19845136 intergenic not near genes chr2R 19845237 intergenic not near genes chr2R_26_19845001 chr2R_19845001 RAL-301_125b 1904 chr2R 19857602 19857654 chr2R 19857746 19857797 6 144 5.5 0.0 2.8 1.6 195 chr2R 19857602 intergenic not near genes chr2R 19857700 intergenic not near genes chr2R 19857797 intergenic not near genes chr2R_6_19855001 chr2R_19855001 RAL-301_125b 1905 chr2R 19914805 19914874 chr2R 19922267 19922336 mdg1 19 7462 8.5 9.0 8.8 1.9 7531 chr2R 19914805 intergenic not near genes chr2R 19918570 intergenic not near genes chr2R 19922336 intergenic not near genes chr2R_19_19915001 chr2R_19915001 RAL-301_125b 1906 chr2R 19943245 19943283 chr2R 19943380 19943406 11 134 0.0 5.5 2.8 2.9 161 chr2R 19943245 intergenic not near genes chr2R 19943326 intergenic not near genes chr2R 19943406 intergenic not near genes chr2R_11_19940001 chr2R_19940001 RAL-301_125b 1907 chr2R 19957394 19957457 chr2R 19962636 19962690 copia 23 5246 8.0 7.5 7.8 2.6 5296 chr2R 19957394 intergenic CG44623 + chr2R 19960042 intergenic not near genes chr2R 19962690 intergenic not near genes chr2R_23_19960001 chr2R_19960001 RAL-301_125b 1908 chr2R 20069207 20069246 chr2R 20071897 20071936 opus 22 2689 0.0 14.0 7.0 2.8 2729 chr2R 20069207 intergenic not near genes chr2R 20070572 intergenic not near genes chr2R 20071936 intergenic not near genes chr2R_22_20070001 chr2R_20070001 RAL-301_125b 1909 chr2R 20080599 20080625 chr2R 20080726 20080752 14 126 3.0 24.0 13.5 1.0 153 chr2R 20080599 intergenic not near genes chr2R 20080676 intergenic not near genes chr2R 20080752 intergenic not near genes chr2R_14_20080001 chr2R_20080001 RAL-301_125b 1910 chr2R 20095347 20095363 chr2R 20095512 20095528 5 165 18.5 9.0 13.8 0.3 181 chr2R 20095347 intergenic not near genes chr2R 20095438 intergenic not near genes chr2R 20095528 intergenic not near genes chr2R_5_20095001 chr2R_20095001 RAL-301_125b 1911 chr2R 20095374 20095422 chr2R 20095510 20095586 21 157 7.0 9.0 8.0 2.3 212 chr2R 20095374 intergenic not near genes chr2R 20095480 intergenic not near genes chr2R 20095586 intergenic not near genes chr2R_21_20095001 chr2R_20095001 RAL-301_125b 1912 chr2R 20125727 20125745 chr2R 20125853 20125871 13 126 10.0 17.0 13.5 0.9 144 chr2R 20125727 intergenic not near genes chr2R 20125799 intergenic not near genes chr2R 20125871 intergenic not near genes chr2R_13_20125001 chr2R_20125001 RAL-301_125b 1913 chr2R 20223920 20223985 chr2R 20224040 20224120 19 134 8.5 7.5 8.0 2.1 200 chr2R 20223920 intergenic not near genes chr2R 20224020 intergenic not near genes chr2R 20224120 intergenic not near genes chr2R_19_20220001 chr2R_20220001 RAL-301_125b 1914 chr2R 20368469 20368496 chr2R 20377682 20377709 roo 10 9213 20.5 10.5 15.5 0.6 9240 chr2R 20368469 intergenic not near genes chr2R 20373089 intergenic not near genes chr2R 20377709 intergenic not near genes chr2R_10_20370001 chr2R_20370001 RAL-301_125b 1915 chr2R 20384496 20384546 chr2R 20384631 20384681 13 135 3.5 5.5 4.5 2.4 185 chr2R 20384496 intergenic not near genes chr2R 20384588 intergenic not near genes chr2R 20384681 intergenic not near genes chr2R_13_20380001 chr2R_20380001 RAL-301_125b 1916 chr2R 20405033 20405111 chr2R 20405999 20406062 40 962 4.0 10.0 7.0 5.0 1029 chr2R 20405033 intergenic not near genes chr2R 20405548 intergenic not near genes chr2R 20406062 intergenic not near genes chr2R_40_20405001 chr2R_20405001 RAL-301_125b 1917 chr2R 20523001 20523071 chr2R 20523155 20523204 31 154 5.0 11.0 8.0 3.4 203 chr2R 20523001 intergenic not near genes chr2R 20523102 intergenic not near genes chr2R 20523204 intergenic not near genes chr2R_31_20520001 chr2R_20520001 RAL-301_125b 1918 chr2R 20528705 20528737 chr2R 20528929 20528954 17 221 18.5 5.0 11.8 1.3 249 chr2R 20528705 exon CG30151 - chr2R 20528830 exon CG30151 - chr2R 20528954 exon CG30151 - chr2R_17_20525001 chr2R_20525001 RAL-301_125b 1919 chr2R 20528743 20528776 chr2R 20528926 20529000 18 218 11.5 5.0 8.2 2.0 257 chr2R 20528743 exon CG30151 - chr2R 20528872 exon CG30151 - chr2R 20529000 exon CG30151 - chr2R_18_20525001 chr2R_20525001 RAL-301_125b 1920 chr2R 20555290 20555338 chr2R 20555431 20555480 19 142 8.5 6.5 7.5 2.2 190 chr2R 20555290 intergenic not near genes chr2R 20555385 intergenic not near genes chr2R 20555480 intergenic not near genes chr2R_19_20555001 chr2R_20555001 RAL-301_125b 1921 chr2R 20571248 20571300 chr2R 20571397 20571399 6 140 9.5 0.0 4.8 1.0 151 chr2R 20571248 intron qsm - chr2R 20571324 intron qsm - chr2R 20571399 intron qsm - chr2R_6_20570001 chr2R_20570001 RAL-301_125b 1922 chr2R 20572523 20572586 chr2R 20572663 20572726 27 139 9.5 4.0 6.8 3.5 203 chr2R 20572523 intron qsm - chr2R 20572624 intron qsm - chr2R 20572726 intron qsm - chr2R_27_20570001 chr2R_20570001 RAL-301_125b 1923 chr2R 20667325 20667339 chr2R 20667482 20667491 9 160 19.0 16.5 17.8 0.5 166 chr2R 20667325 intergenic Fem-1 -,exu - chr2R 20667408 intergenic exu -,Fem-1 - chr2R 20667491 3` UTR exu - chr2R_9_20665001 chr2R_20665001 RAL-301_125b 1924 chr2R 20690145 20690170 chr2R 20690329 20690354 15 184 14.0 15.0 14.5 1.0 209 chr2R 20690145 intergenic not near genes chr2R 20690250 intergenic not near genes chr2R 20690354 intergenic not near genes chr2R_15_20690001 chr2R_20690001 RAL-301_125b 1925 chr2R 20739401 20739469 chr2R 20744219 20744287 F-element 21 4818 9.0 3.0 6.0 3.0 4886 chr2R 20739401 intron dpr + chr2R 20741844 intron dpr + chr2R 20744287 intron dpr + chr2R_21_20740001 chr2R_20740001 RAL-301_125b 1926 chr2R 20757420 20757458 chr2R 20757547 20757585 15 126 7.5 13.5 10.5 1.3 165 chr2R 20757420 intergenic not near genes chr2R 20757502 intergenic not near genes chr2R 20757585 intergenic not near genes chr2R_15_20755001 chr2R_20755001 RAL-301_125b 1927 chr2R 20776511 20776539 chr2R 20776638 20776666 10 127 12.0 0.0 6.0 1.4 155 chr2R 20776511 intergenic CG43709 -,CG43710 - chr2R 20776588 intergenic CG43710 -,CG43709 - chr2R 20776666 intergenic CG43710 -,CG43709 - chr2R_10_20775001 chr2R_20775001 RAL-301_125b 1928 chr2R 20783262 20783324 chr2R 20788084 20788146 F-element 25 4822 8.0 10.0 9.0 2.5 4884 chr2R 20783262 intergenic not near genes chr2R 20785704 intergenic not near genes chr2R 20788146 intergenic CG43666 - chr2R_25_20785001 chr2R_20785001 RAL-301_125b 1929 chr2R 20838059 20838072 chr2R 20838190 20838203 4 131 0.0 18.5 9.2 0.4 144 chr2R 20838059 intron CR44667 + chr2R 20838131 intron CR44667 + chr2R 20838203 intron CR44667 + chr2R_4_20835001 chr2R_20835001 RAL-301_125b 1930 chr2R 20891324 20891388 chr2R 20891466 20891523 21 127 7.5 5.0 6.2 2.9 199 chr2R 20891324 intron otp - chr2R 20891424 intron otp - chr2R 20891523 intron otp - chr2R_21_20890001 chr2R_20890001 RAL-301_125b 1931 chr2R 20942364 20942371 chr2R 20942503 20942510 4 139 0.0 14.5 7.2 0.5 146 chr2R 20942364 intergenic not near genes chr2R 20942437 intergenic not near genes chr2R 20942510 intergenic not near genes chr2R_4_20940001 chr2R_20940001 RAL-301_125b 1932 chr2R 20962862 20962924 chr2R 20963010 20963072 27 147 8.0 10.5 9.2 2.6 210 chr2R 20962862 intergenic not near genes chr2R 20962967 intergenic not near genes chr2R 20963072 intergenic not near genes chr2R_27_20960001 chr2R_20960001 RAL-301_125b 1933 chr2R 21083118 21083186 chr2R 21083254 21083322 30 135 12.5 9.5 11.0 2.5 204 chr2R 21083118 intron Treh + chr2R 21083220 intron Treh + chr2R 21083322 intron Treh + chr2R_30_21080001 chr2R_21080001 RAL-301_125b 1934 chr2R 21101630 21101669 chr2R 21101764 21101810 13 136 7.5 14.5 11.0 1.1 180 chr2R 21101630 intergenic CG34396 +,ktub + chr2R 21101720 intergenic ktub +,CG34396 + chr2R 21101810 intergenic ktub +,CG34396 + chr2R_13_21100001 chr2R_21100001 RAL-301_125b 1935 chr2R 21110741 21110811 chr2R 21110884 21110954 33 142 8.0 6.0 7.0 4.1 213 chr2R 21110741 intron ktub + chr2R 21110848 intron ktub + chr2R 21110954 intron ktub + chr2R_33_21110001 chr2R_21110001 RAL-301_125b 1936 chr2R 21113430 21113483 chr2R 21113569 21113622 21 139 11.5 7.0 9.2 2.1 192 chr2R 21113430 intron ktub + chr2R 21113526 intron ktub + chr2R 21113622 intron ktub + chr2R_21_21110001 chr2R_21110001 RAL-301_125b 1937 chr2R 21151096 21151145 chr2R 21153758 21153828 opus 11 2677 1.5 8.5 5.0 1.8 2732 chr2R 21151096 intron CG30389 - chr2R 21152462 intron CG30389 - chr2R 21153828 intron CG30389 - chr2R_11_21150001 chr2R_21150001 RAL-301_125b 1938 chr2R 21188168 21188243 chr2R 21188299 21188374 28 131 7.0 11.5 9.2 2.7 206 chr2R 21188168 exon tud + chr2R 21188271 intron tud + chr2R 21188374 exon tud + chr2R_28_21185001 chr2R_21185001 RAL-301_125b 1939 chr2R 21208786 21208814 chr2R 21209089 21209101 6 300 16.5 4.5 10.5 0.5 315 chr2R 21208786 intron,intron CG44245 +,Glycogenin + chr2R 21208944 intron,intron CG44245 +,Glycogenin + chr2R 21209101 intron,intron CG44245 +,Glycogenin + chr2R_6_21205001 chr2R_21205001 RAL-301_125b 1940 chr2R 21208819 21208868 chr2R 21209087 21209097 4 272 2.0 4.5 3.2 1.0 278 chr2R 21208819 intron,intron CG44245 +,Glycogenin + chr2R 21208958 intron,intron CG44245 +,Glycogenin + chr2R 21209097 intron,intron CG44245 +,Glycogenin + chr2R_4_21205001 chr2R_21205001 RAL-301_125b 1941 chr2R 21258456 21258466 chr2R 21258559 21258589 5 121 0.0 11.0 5.5 0.8 133 chr2R 21258456 intron Rgk3 + chr2R 21258522 intron Rgk3 + chr2R 21258589 intron Rgk3 + chr2R_5_21255001 chr2R_21255001 RAL-301_125b 1942 chr2R 21259622 21259626 chr2R 21259751 21259755 5 129 21.0 17.5 19.2 0.2 133 chr2R 21259622 intron Rgk3 + chr2R 21259688 intron Rgk3 + chr2R 21259755 intron Rgk3 + chr2R_5_21255001 chr2R_21255001 RAL-301_125b 1943 chr2R 21259640 21259665 chr2R 21259747 21259794 12 123 15.5 17.5 16.5 0.7 154 chr2R 21259640 intron Rgk3 + chr2R 21259717 intron Rgk3 + chr2R 21259794 intron Rgk3 + chr2R_12_21255001 chr2R_21255001 RAL-301_125b 1944 chr2R 21285392 21285435 chr2R 21285511 21285562 19 126 12.5 12.5 12.5 1.4 170 chr2R 21285392 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285477 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285562 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_19_21285001 chr2R_21285001 RAL-301_125b 1945 chr2R 21363107 21363174 chr2R 21363244 21363313 10 143 0.0 10.0 5.0 1.7 206 chr2R 21363107 intron cv-2 - chr2R 21363210 intron cv-2 - chr2R 21363313 intron cv-2 - chr2R_10_21360001 chr2R_21360001 RAL-301_125b 1946 chr2R 21364635 21364706 chr2R 21364832 21364905 8 198 4.5 9.5 7.0 1.0 270 chr2R 21364635 intron cv-2 - chr2R 21364770 intron cv-2 - chr2R 21364905 intron cv-2 - chr2R_8_21360001 chr2R_21360001 RAL-301_125b 1947 chr2R 21365776 21365785 chr2R 21365912 21365921 7 136 4.0 0.0 2.0 2.3 145 chr2R 21365776 intron cv-2 - chr2R 21365848 intron cv-2 - chr2R 21365921 intron cv-2 - chr2R_7_21365001 chr2R_21365001 RAL-301_125b 1948 chr2R 21370475 21370537 chr2R 21370632 21370694 19 157 9.5 7.0 8.2 2.1 219 chr2R 21370475 intron cv-2 - chr2R 21370584 intron cv-2 - chr2R 21370694 intron cv-2 - chr2R_19_21370001 chr2R_21370001 RAL-301_125b 1949 chr2R 21370804 21370858 chr2R 21371021 21371077 17 217 12.0 7.5 9.8 1.6 273 chr2R 21370804 intron cv-2 - chr2R 21370940 intron cv-2 - chr2R 21371077 intron cv-2 - chr2R_17_21370001 chr2R_21370001 RAL-301_125b 1950 chr2R 21392642 21392646 chr2R 21392772 21392776 5 129 23.0 7.5 15.2 0.3 134 chr2R 21392642 3` UTR Sdc - chr2R 21392709 3` UTR Sdc - chr2R 21392776 3` UTR Sdc - chr2R_5_21390001 chr2R_21390001 RAL-301_125b 1951 chr2R 21408325 21408408 chr2R 21408467 21408550 30 138 6.5 0.5 3.5 6.7 225 chr2R 21408325 intron Sdc - chr2R 21408438 intron Sdc - chr2R 21408550 intron Sdc - chr2R_30_21405001 chr2R_21405001 RAL-301_125b 1952 chr2R 21447068 21447112 chr2R 21447220 21447267 5 154 3.5 5.5 4.5 0.9 199 chr2R 21447068 intron Sdc - chr2R 21447168 intron Sdc - chr2R 21447267 intron Sdc - chr2R_5_21445001 chr2R_21445001 RAL-301_125b 1953 chr2R 21461417 21461484 chr2R 21461573 21461604 10 148 10.0 1.0 5.5 1.5 187 chr2R 21461417 intron Sdc - chr2R 21461510 intron Sdc - chr2R 21461604 intron Sdc - chr2R_10_21460001 chr2R_21460001 RAL-301_125b 1954 chr2R 21467498 21467556 chr2R 21467635 21467696 10 140 7.5 9.5 8.5 1.1 198 chr2R 21467498 intron Sdc - chr2R 21467597 intron Sdc - chr2R 21467696 intron Sdc - chr2R_10_21465001 chr2R_21465001 RAL-301_125b 1955 chr2R 21469898 21469971 chr2R 21470036 21470060 11 132 2.0 11.5 6.8 1.4 162 chr2R 21469898 intron Sdc - chr2R 21469979 intron Sdc - chr2R 21470060 intron Sdc - chr2R_11_21465001 chr2R_21465001 RAL-301_125b 1956 chr2R 21540637 21540684 chr2R 21540905 21540952 32 268 9.0 4.5 6.8 4.1 315 chr2R 21540637 intron Egfr + chr2R 21540794 intron Egfr + chr2R 21540952 intron Egfr + chr2R_32_21540001 chr2R_21540001 RAL-301_125b 1957 chr2R 21578873 21578896 chr2R 21578999 21579022 6 127 18.5 6.5 12.5 0.4 149 chr2R 21578873 intergenic not near genes chr2R 21578948 intergenic not near genes chr2R 21579022 intergenic not near genes chr2R_6_21575001 chr2R_21575001 RAL-301_125b 1958 chr2R 21592803 21592850 chr2R 21592936 21592958 6 126 11.5 9.0 10.2 0.5 155 chr2R 21592803 intergenic not near genes chr2R 21592880 intergenic not near genes chr2R 21592958 intergenic not near genes chr2R_6_21590001 chr2R_21590001 RAL-301_125b 1959 chr2R 21721548 21721610 chr2R 21721669 21721747 14 135 7.0 0.0 3.5 3.1 199 chr2R 21721548 intron LBR + chr2R 21721648 intron LBR + chr2R 21721747 intron LBR + chr2R_14_21720001 chr2R_21720001 RAL-301_125b 1960 chr2R 21732138 21732168 chr2R 21732273 21732303 7 135 0.0 19.5 9.8 0.6 165 chr2R 21732138 intergenic not near genes chr2R 21732220 intergenic not near genes chr2R 21732303 intergenic not near genes chr2R_7_21730001 chr2R_21730001 RAL-301_125b 1961 chr2R 21738256 21738304 chr2R 21747445 21747511 roo 16 9196 7.5 9.0 8.2 1.7 9255 chr2R 21738256 intergenic not near genes chr2R 21742884 intergenic not near genes chr2R 21747511 intergenic not near genes chr2R_16_21740001 chr2R_21740001 RAL-301_125b 1962 chr2R 21753040 21753109 chr2R 21753575 21753644 roo 26 534 7.0 12.5 9.8 2.4 604 chr2R 21753040 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753644 intergenic not near genes chr2R_26_21750001 chr2R_21750001 RAL-301_125b 1963 chr2R 21803808 21803903 chr2R 21803960 21804035 25 139 0.5 8.0 4.2 4.8 227 chr2R 21803808 5` UTR CR9284 + chr2R 21803922 5` UTR CR9284 + chr2R 21804035 5` UTR CR9284 + chr2R_25_21800001 chr2R_21800001 RAL-301_125b 1964 chr2R 21809472 21809513 chr2R 21817762 21817803 roo 19 8289 16.0 9.5 12.8 1.4 8331 chr2R 21809472 intergenic not near genes chr2R 21813638 intergenic not near genes chr2R 21817803 intergenic not near genes chr2R_19_21810001 chr2R_21810001 RAL-301_125b 1965 chr2R 21857296 21857372 chr2R 21857437 21857513 31 139 9.0 9.0 9.0 3.1 217 chr2R 21857296 intergenic not near genes chr2R 21857404 intergenic not near genes chr2R 21857513 intergenic not near genes chr2R_31_21855001 chr2R_21855001 RAL-301_125b 1966 chr2R 21888246 21888289 chr2R 21888407 21888450 14 161 2.0 8.5 5.2 2.3 204 chr2R 21888246 intron Fili + chr2R 21888348 intron Fili + chr2R 21888450 intron Fili + chr2R_14_21885001 chr2R_21885001 RAL-301_125b 1967 chr2R 21922581 21922616 chr2R 21922708 21922743 13 127 6.0 11.5 8.8 1.3 162 chr2R 21922581 intron Fili + chr2R 21922662 intron Fili + chr2R 21922743 intron Fili + chr2R_13_21920001 chr2R_21920001 RAL-301_125b 1968 chr2R 21927472 21927550 chr2R 21927605 21927677 28 132 7.5 6.0 6.8 3.6 205 chr2R 21927472 intron Fili + chr2R 21927574 intron Fili + chr2R 21927677 intron Fili + chr2R_28_21925001 chr2R_21925001 RAL-301_125b 1969 chr2R 21932207 21932221 chr2R 21932335 21932349 11 128 27.0 11.5 19.2 0.5 142 chr2R 21932207 intron Fili + chr2R 21932278 intron Fili + chr2R 21932349 intron Fili + chr2R_11_21930001 chr2R_21930001 RAL-301_125b 1970 chr2R 21932224 21932281 chr2R 21932327 21932371 28 120 13.5 14.0 13.8 1.9 147 chr2R 21932224 intron Fili + chr2R 21932298 intron Fili + chr2R 21932371 intron Fili + chr2R_28_21930001 chr2R_21930001 RAL-301_125b 1971 chr2R 21946728 21946793 chr2R 21946874 21946939 28 146 10.0 8.5 9.2 2.7 211 chr2R 21946728 intergenic Fili + chr2R 21946834 intergenic not near genes chr2R 21946939 intergenic not near genes chr2R_28_21945001 chr2R_21945001 RAL-301_125b 1972 chr2R 22003047 22003122 chr2R 22003183 22003258 25 134 4.5 0.0 2.2 7.8 211 chr2R 22003047 intron CG34370 - chr2R 22003152 intron CG34370 - chr2R 22003258 intron CG34370 - chr2R_25_22000001 chr2R_22000001 RAL-301_125b 1973 chr2R 22029487 22029531 chr2R 22029615 22029659 19 128 11.0 2.5 6.8 2.4 172 chr2R 22029487 intron CG34370 - chr2R 22029573 intron CG34370 - chr2R 22029659 intron CG34370 - chr2R_19_22025001 chr2R_22025001 RAL-301_125b 1974 chr2R 22072635 22072710 chr2R 22072770 22072845 17 135 9.5 7.0 8.2 1.8 210 chr2R 22072635 intron CG11474 - chr2R 22072740 intron CG11474 - chr2R 22072845 exon CG11474 - chr2R_17_22070001 chr2R_22070001 RAL-301_125b 1975 chr2R 22075794 22075811 chr2R 22075921 22075938 7 127 1.0 11.0 6.0 1.0 144 chr2R 22075794 intergenic GlcT-1 +,CG2921 - chr2R 22075866 intergenic GlcT-1 + chr2R 22075938 intergenic GlcT-1 + chr2R_7_22075001 chr2R_22075001 RAL-301_125b 1976 chr2R 22107319 22107358 chr2R 22107455 22107487 7 135 0.5 8.0 4.2 1.3 168 chr2R 22107319 intron Vrp1 - chr2R 22107403 intron Vrp1 - chr2R 22107487 intron Vrp1 - chr2R_7_22105001 chr2R_22105001 RAL-301_125b 1977 chr2R 22120776 22120812 chr2R 22121028 22121064 18 252 0.0 4.5 2.2 5.6 288 chr2R 22120776 intron Vrp1 - chr2R 22120920 intron Vrp1 - chr2R 22121064 intron Vrp1 - chr2R_18_22120001 chr2R_22120001 RAL-301_125b 1978 chr2R 22130347 22130355 chr2R 22130463 22130506 6 136 14.5 14.0 14.2 0.4 159 chr2R 22130347 exon CG34205 - chr2R 22130426 exon CG34205 - chr2R 22130506 exon CG34205 - chr2R_6_22130001 chr2R_22130001 RAL-301_125b 1979 chr2R 22185626 22185707 chr2R 22185775 22185856 18 149 2.5 0.0 1.2 8.2 230 chr2R 22185626 exon MED16 + chr2R 22185741 3` UTR MED16 + chr2R 22185856 3` UTR MED16 + chr2R_18_22185001 chr2R_22185001 RAL-301_125b 1980 chr2R 22290030 22290072 chr2R 22290164 22290187 17 133 19.0 8.0 13.5 1.2 157 chr2R 22290030 intergenic not near genes chr2R 22290108 intergenic not near genes chr2R 22290187 intergenic not near genes chr2R_17_22290001 chr2R_22290001 RAL-301_125b 1981 chr2R 22292029 22292103 chr2R 22292166 22292240 36 132 6.0 16.5 11.2 3.0 211 chr2R 22292029 5` UTR CR43422 + chr2R 22292134 5` UTR CR43422 + chr2R 22292240 5` UTR CR43422 + chr2R_36_22290001 chr2R_22290001 RAL-301_125b 1982 chr2R 22349650 22349702 chr2R 22351484 22351536 jockey 21 1832 16.0 13.0 14.5 1.4 1886 chr2R 22349650 intron Liprin-gamma - chr2R 22350593 intron Liprin-gamma - chr2R 22351536 intron Liprin-gamma - chr2R_21_22350001 chr2R_22350001 RAL-301_125b 1983 chr2R 22349705 22349713 chr2R 22351472 22351542 jockey 10 1824 12.5 10.0 11.2 0.8 1837 chr2R 22349705 intron Liprin-gamma - chr2R 22350624 intron Liprin-gamma - chr2R 22351542 intron Liprin-gamma - chr2R_10_22350001 chr2R_22350001 RAL-301_125b 1984 chr2R 22360342 22360346 chr2R 22360825 22360829 jockey 7 483 22.0 8.5 15.2 0.4 487 chr2R 22360342 intron Liprin-gamma - chr2R 22360586 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_7_22360001 chr2R_22360001 RAL-301_125b 1985 chr2R 22362610 22362687 chr2R 22362739 22362816 23 126 5.5 8.0 6.8 2.9 206 chr2R 22362610 intron Liprin-gamma - chr2R 22362713 intron Liprin-gamma - chr2R 22362816 intron Liprin-gamma - chr2R_23_22360001 chr2R_22360001 RAL-301_125b 1986 chr2R 22374589 22374638 chr2R 22374726 22374775 18 137 10.0 10.5 10.2 1.6 186 chr2R 22374589 3` UTR CR44759 - chr2R 22374682 3` UTR CR44759 - chr2R 22374775 3` UTR CR44759 - chr2R_18_22370001 chr2R_22370001 RAL-301_125b 1987 chr2R 22411455 22411526 chr2R 22411583 22411654 32 128 11.0 10.5 10.8 2.7 199 chr2R 22411455 5` UTR qkr58E-3 - chr2R 22411554 intergenic qkr58E-3 -,Mes4 + chr2R 22411654 intergenic qkr58E-3 -,Mes4 + chr2R_32_22410001 chr2R_22410001 RAL-301_125b 1988 chr2R 22420464 22420514 chr2R 22420592 22420642 8 128 3.5 0.0 1.8 2.9 178 chr2R 22420464 intergenic mRpS29 - chr2R 22420553 intergenic mRpS29 -,rad50 + chr2R 22420642 intergenic mRpS29 -,rad50 + chr2R_8_22420001 chr2R_22420001 RAL-301_125b 1989 chr2R 22506667 22506735 chr2R 22506795 22506863 22 128 7.5 11.0 9.2 2.2 196 chr2R 22506667 intron px - chr2R 22506765 intron px - chr2R 22506863 intron px - chr2R_22_22505001 chr2R_22505001 RAL-301_125b 1990 chr2R 22523011 22523079 chr2R 22523137 22523141 26 124 9.0 8.0 8.5 2.7 130 chr2R 22523011 intron px - chr2R 22523076 intron px - chr2R 22523141 intron px - chr2R_26_22520001 chr2R_22520001 RAL-301_125b 1991 chr2R 22525705 22525780 chr2R 22529310 22529389 jockey 34 3603 7.0 6.0 6.5 4.5 3684 chr2R 22525705 intron px - chr2R 22527547 intron px - chr2R 22529389 intron px - chr2R_34_22525001 chr2R_22525001 RAL-301_125b 1992 chr2R 22536093 22536153 chr2R 22536330 22536381 9 230 9.5 0.0 4.8 1.6 288 chr2R 22536093 intron px - chr2R 22536237 intron px - chr2R 22536381 intron px - chr2R_9_22535001 chr2R_22535001 RAL-301_125b 1993 chr2R 22575615 22575689 chr2R 22575744 22575818 23 118 8.0 9.5 8.8 2.3 203 chr2R 22575615 intron dnr1 - chr2R 22575716 intron dnr1 - chr2R 22575818 intron dnr1 - chr2R_23_22575001 chr2R_22575001 RAL-301_125b 1994 chr2R 22580413 22580445 chr2R 22586613 22586645 diver 16 6200 0.0 11.0 5.5 2.5 6232 chr2R 22580413 intron dnr1 - chr2R 22583529 intron dnr1 - chr2R 22586645 intron dnr1 - chr2R_16_22580001 chr2R_22580001 RAL-301_125b 1995 chr2R 22588107 22588155 chr2R 22588252 22588255 12 140 8.0 10.0 9.0 1.2 148 chr2R 22588107 intron dnr1 - chr2R 22588181 intron dnr1 - chr2R 22588255 intron dnr1 - chr2R_12_22585001 chr2R_22585001 RAL-301_125b 1996 chr2R 22774919 22774997 chr2R 22775388 22775449 jockey 40 466 9.5 10.0 9.8 3.7 530 chr2R 22774919 intron CG42260 - chr2R 22775184 intron CG42260 - chr2R 22775449 intron CG42260 - chr2R_40_22775001 chr2R_22775001 RAL-301_125b 1997 chr2R 22787549 22787592 chr2R 22787732 22787775 19 183 9.5 5.5 7.5 2.2 226 chr2R 22787549 intron CG42260 - chr2R 22787662 intron CG42260 - chr2R 22787775 intron CG42260 - chr2R_19_22785001 chr2R_22785001 RAL-301_125b 1998 chr2R 22842985 22843043 chr2R 22844997 22845055 flea 19 2011 11.5 10.0 10.8 1.6 2070 chr2R 22842985 intergenic CG9826 + chr2R 22844020 intergenic not near genes chr2R 22845055 intergenic not near genes chr2R_19_22840001 chr2R_22840001 RAL-301_125b 1999 chr2R 22941762 22941843 chr2R 22941898 22941972 33 131 2.0 11.0 6.5 4.4 210 chr2R 22941762 intergenic CG42694 + chr2R 22941867 intergenic CG42694 + chr2R 22941972 5` UTR CG42694 + chr2R_33_22940001 chr2R_22940001 RAL-301_125b 2000 chr2R 22951669 22951866 chr2R 22951859 22952002 30 201 0.0 0.0 0.0 30.0 333 chr2R 22951669 3` UTR CR32835 - chr2R 22951836 3` UTR CR32835 - chr2R 22952002 3` UTR CR32835 - chr2R_30_22950001 chr2R_22950001 RAL-301_125b 2001 chr2R 22953342 22953384 chr2R 22953486 22953528 10 143 6.0 3.5 4.8 1.7 186 chr2R 22953342 intron CR32835 - chr2R 22953435 3` UTR CR32835 - chr2R 22953528 3` UTR CR32835 - chr2R_10_22950001 chr2R_22950001 RAL-301_125b 2002 chr2R 22958751 22958805 chr2R 22963892 22963920 flea 12 5134 10.5 15.5 13.0 0.9 5169 chr2R 22958751 intergenic not near genes chr2R 22961336 intergenic not near genes chr2R 22963920 intergenic not near genes chr2R_12_22960001 chr2R_22960001 RAL-301_125b 2003 chr2R 22968092 22968166 chr2R 22968231 22968305 30 138 8.0 11.5 9.8 2.8 213 chr2R 22968092 intergenic not near genes chr2R 22968198 intergenic not near genes chr2R 22968305 intergenic not near genes chr2R_30_22965001 chr2R_22965001 RAL-301_125b 2004 chr2R 23029568 23029586 chr2R 23029690 23029713 8 125 15.5 6.0 10.8 0.7 145 chr2R 23029568 intron,intron twi +,CG42741 - chr2R 23029640 intron,intron twi +,CG42741 - chr2R 23029713 intron,intron twi +,CG42741 - chr2R_8_23025001 chr2R_23025001 RAL-301_125b 2005 chr2R 23045293 23045358 chr2R 23045551 23045622 33 263 8.5 10.5 9.5 3.1 329 chr2R 23045293 intron twi + chr2R 23045458 intron twi + chr2R 23045622 intron twi + chr2R_33_23045001 chr2R_23045001 RAL-301_125b 2006 chr2R 23108923 23108931 chr2R 23109055 23109063 5 132 11.5 16.0 13.8 0.3 140 chr2R 23108923 intergenic not near genes chr2R 23108993 intergenic not near genes chr2R 23109063 intergenic not near genes chr2R_5_23105001 chr2R_23105001 RAL-301_125b 2007 chr2R 23122780 23122850 chr2R 23123254 23123324 26 473 9.5 4.0 6.8 3.3 544 chr2R 23122780 intergenic not near genes chr2R 23123052 intergenic not near genes chr2R 23123324 intergenic not near genes chr2R_26_23120001 chr2R_23120001 RAL-301_125b 2008 chr2R 23131413 23131478 chr2R 23131554 23131619 20 140 0.5 9.5 5.0 3.3 206 chr2R 23131413 intergenic not near genes chr2R 23131516 intergenic not near genes chr2R 23131619 intergenic not near genes chr2R_20_23130001 chr2R_23130001 RAL-301_125b 2009 chr2R 23133396 23133455 chr2R 23133525 23133584 6 129 8.0 0.0 4.0 1.2 188 chr2R 23133396 intergenic not near genes chr2R 23133490 intergenic not near genes chr2R 23133584 intergenic not near genes chr2R_6_23130001 chr2R_23130001 RAL-301_125b 2010 chr2R 23138397 23138459 chr2R 23138532 23138594 33 135 12.0 7.0 9.5 3.1 197 chr2R 23138397 intergenic CG30192 + chr2R 23138496 intergenic CG30192 + chr2R 23138594 5` UTR CG30192 + chr2R_33_23135001 chr2R_23135001 RAL-301_125b 2011 chr2R 23186531 23186594 chr2R 23186659 23186722 30 127 13.0 14.5 13.8 2.0 191 chr2R 23186531 intron CG34371 - chr2R 23186626 intron CG34371 - chr2R 23186722 intron CG34371 - chr2R_30_23185001 chr2R_23185001 RAL-301_125b 2012 chr2R 23188510 23188576 chr2R 23188638 23188704 19 128 10.5 12.5 11.5 1.5 194 chr2R 23188510 intron CG34371 - chr2R 23188607 intron CG34371 - chr2R 23188704 intron CG34371 - chr2R_19_23185001 chr2R_23185001 RAL-301_125b 2013 chr2R 23189975 23190002 chr2R 23190105 23190121 7 128 19.5 1.5 10.5 0.6 146 chr2R 23189975 intron CG34371 - chr2R 23190048 intron CG34371 - chr2R 23190121 intron CG34371 - chr2R_7_23190001 chr2R_23190001 RAL-301_125b 2014 chr2R 23225918 23225982 chr2R 23226072 23226126 34 153 9.5 5.5 7.5 4.0 208 chr2R 23225918 intergenic not near genes chr2R 23226022 intergenic not near genes chr2R 23226126 intergenic not near genes chr2R_34_23225001 chr2R_23225001 RAL-301_125b 2015 chr2R 23275603 23275683 chr2R 23275744 23275783 22 132 3.0 8.5 5.8 3.2 180 chr2R 23275603 intergenic ord - chr2R 23275693 intergenic ord - chr2R 23275783 intergenic ord - chr2R_22_23275001 chr2R_23275001 RAL-301_125b 2016 chr2R 23339462 23339530 chr2R 23339592 23339660 22 130 7.0 8.0 7.5 2.6 198 chr2R 23339462 intergenic not near genes chr2R 23339561 intergenic not near genes chr2R 23339660 intergenic not near genes chr2R_22_23335001 chr2R_23335001 RAL-301_125b 2017 chr2R 23402587 23402606 chr2R 23407684 23407703 flea 12 5097 9.0 12.5 10.8 1.0 5116 chr2R 23402587 intergenic CG3520 - chr2R 23405145 intergenic not near genes chr2R 23407703 intergenic not near genes chr2R_12_23405001 chr2R_23405001 RAL-301_125b 2018 chr2R 23423691 23423769 chr2R 23423899 23423977 24 207 6.0 5.5 5.8 3.5 286 chr2R 23423691 intron CG9815 - chr2R 23423834 intron CG9815 - chr2R 23423977 intron CG9815 - chr2R_24_23420001 chr2R_23420001 RAL-301_125b 2019 chr2R 23429167 23429243 chr2R 23429442 23429488 25 266 5.5 12.0 8.8 2.6 321 chr2R 23429167 intron CG9815 - chr2R 23429328 intron CG9815 - chr2R 23429488 intron CG9815 - chr2R_25_23425001 chr2R_23425001 RAL-301_125b 2020 chr2R 23437184 23437228 chr2R 23437311 23437354 13 125 9.5 10.0 9.8 1.2 170 chr2R 23437184 intergenic not near genes chr2R 23437269 intergenic not near genes chr2R 23437354 intergenic not near genes chr2R_13_23435001 chr2R_23435001 RAL-301_125b 2021 chr2R 23437233 23437242 chr2R 23437309 23437333 4 85 7.0 10.0 8.5 0.4 100 chr2R 23437233 intergenic not near genes chr2R 23437283 intergenic not near genes chr2R 23437333 intergenic not near genes chr2R_4_23435001 chr2R_23435001 RAL-301_125b 2022 chr2R 23461100 23461136 chr2R 23461225 23461279 20 134 13.0 13.0 13.0 1.4 179 chr2R 23461100 intron CG43795 + chr2R 23461190 intron CG43795 + chr2R 23461279 intron CG43795 + chr2R_20_23460001 chr2R_23460001 RAL-301_125b 2023 chr2R 23475387 23475670 chr2R 23475517 23475799 12 128 8.0 16.0 12.0 0.9 412 chr2R 23475387 intron CG43795 + chr2R 23475593 intron CG43795 + chr2R 23475799 intron,3` UTR CG43795 +,CG13557 - chr2R_12_23475001 chr2R_23475001 RAL-301_125b 2024 chr2R 23485360 23485403 chr2R 23485492 23485534 23 131 5.0 14.5 9.8 2.1 174 chr2R 23485360 exon CG43795 + chr2R 23485447 intron CG43795 + chr2R 23485534 intron CG43795 + chr2R_23_23485001 chr2R_23485001 RAL-301_125b 2025 chr2R 23492962 23493035 chr2R 23493094 23493142 30 130 9.0 10.0 9.5 2.9 180 chr2R 23492962 intergenic not near genes chr2R 23493052 intergenic not near genes chr2R 23493142 intergenic not near genes chr2R_30_23490001 chr2R_23490001 RAL-301_125b 2026 chr2R 23508874 23508945 chr2R 23509041 23509112 32 167 7.5 5.5 6.5 4.3 238 chr2R 23508874 intergenic not near genes chr2R 23508993 intergenic not near genes chr2R 23509112 intergenic not near genes chr2R_32_23505001 chr2R_23505001 RAL-301_125b 2027 chr2R 23529535 23529597 chr2R 23537156 23537188 412 12 7614 6.5 5.0 5.8 1.8 7653 chr2R 23529535 intron bw - chr2R 23533362 intron bw - chr2R 23537188 exon bw - chr2R_12_23530001 chr2R_23530001 RAL-301_125b 2028 chr2R 23588045 23588074 chr2R 23588173 23588202 13 128 11.5 10.5 11.0 1.1 157 chr2R 23588045 intron apt + chr2R 23588124 intron apt + chr2R 23588202 intron apt + chr2R_13_23585001 chr2R_23585001 RAL-301_125b 2029 chr2R 23605543 23605597 chr2R 23605702 23605752 16 155 3.5 7.5 5.5 2.5 209 chr2R 23605543 intron CG17664 - chr2R 23605648 intron CG17664 - chr2R 23605752 intron,3` UTR CG17664 -,CG17662 - chr2R_16_23605001 chr2R_23605001 RAL-301_125b 2030 chr2R 23606988 23607193 chr2R 23607119 23607313 61 135 0.0 0.0 0.0 61.0 325 chr2R 23606988 intron CG17664 - chr2R 23607150 intron CG17664 - chr2R 23607313 intron CG17664 - chr2R_61_23605001 chr2R_23605001 RAL-301_125b 2031 chr2R 23635641 23635726 chr2R 23635771 23635852 39 122 6.5 6.5 6.5 5.2 211 chr2R 23635641 intron retn + chr2R 23635746 intron retn + chr2R 23635852 intron retn + chr2R_39_23635001 chr2R_23635001 RAL-301_125b 2032 chr2R 23636761 23636861 chr2R 23636895 23636987 7 129 4.5 8.5 6.5 0.9 226 chr2R 23636761 intron retn + chr2R 23636874 intron retn + chr2R 23636987 intron retn + chr2R_7_23635001 chr2R_23635001 RAL-301_125b 2033 chr2R 23705627 23705702 chr2R 23710855 23710930 28 5237 62.5 60.0 61.2 0.5 5303 chr2R 23705627 exon l(2)not - chr2R 23708278 intron,exon l(2)not -,l(2)tid + chr2R 23710930 intergenic not near genes chr2R_28_23705001 chr2R_23705001 RAL-301_125b 2034 chr2R 23718286 23718328 chr2R 23718412 23718460 10 125 74.5 71.5 73.0 0.1 174 chr2R 23718286 intron Sesn + chr2R 23718373 intron Sesn + chr2R 23718460 intron Sesn + chr2R_10_23715001 chr2R_23715001 RAL-301_125b 2035 chr2R 23721767 23721787 chr2R 23721896 23721921 9 133 0.5 16.5 8.5 0.9 154 chr2R 23721767 intron Sesn + chr2R 23721844 intron Sesn + chr2R 23721921 intron Sesn + chr2R_9_23720001 chr2R_23720001 RAL-301_125b 2036 chr2R 23722482 23722528 chr2R 23722614 23722666 18 135 9.0 14.5 11.8 1.4 184 chr2R 23722482 5` UTR Sesn + chr2R 23722574 5` UTR Sesn + chr2R 23722666 5` UTR Sesn + chr2R_18_23720001 chr2R_23720001 RAL-301_125b 2037 chr2R 23783502 23783566 chr2R 23783656 23783720 29 154 5.5 7.0 6.2 4.0 218 chr2R 23783502 intron CG9850 - chr2R 23783611 intron CG9850 - chr2R 23783720 intron CG9850 - chr2R_29_23780001 chr2R_23780001 RAL-301_125b 2038 chr2R 23821898 23821908 chr2R 23822026 23822036 7 128 0.0 12.0 6.0 1.0 138 chr2R 23821898 intron CG5549 + chr2R 23821967 intron CG5549 + chr2R 23822036 intron CG5549 + chr2R_7_23820001 chr2R_23820001 RAL-301_125b 2039 chr2R 23821912 23821954 chr2R 23822016 23822085 15 119 0.0 9.5 4.8 2.6 173 chr2R 23821912 intron CG5549 + chr2R 23821998 intron CG5549 + chr2R 23822085 intron CG5549 + chr2R_15_23820001 chr2R_23820001 RAL-301_125b 2040 chr2R 23914255 23914332 chr2R 23921929 23921981 412 34 7670 6.5 12.5 9.5 3.2 7726 chr2R 23914255 exon kcc + chr2R 23918118 intron kcc + chr2R 23921981 exon kcc + chr2R_34_23915001 chr2R_23915001 RAL-301_125b 2041 chr2R 24025668 24025740 chr2R 24025820 24025889 25 149 11.0 6.0 8.5 2.6 221 chr2R 24025668 3` UTR,3` UTR CR45350 -,Adk2 + chr2R 24025778 3` UTR Adk2 + chr2R 24025889 intergenic Adk2 +,CR45350 -,PebIII + chr2R_25_24025001 chr2R_24025001 RAL-301_125b 2042 chr2R 24031335 24031405 chr2R 24031469 24031539 40 133 11.5 9.0 10.2 3.6 204 chr2R 24031335 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031539 3` UTR Chi - chr2R_40_24030001 chr2R_24030001 RAL-301_125b 2043 chr2R 24147026 24147096 chr2R 24154649 24154708 412 42 7623 9.5 12.0 10.8 3.6 7682 chr2R 24147026 intron Dat + chr2R 24150867 intron Dat + chr2R 24154708 intron Dat + chr2R_42_24150001 chr2R_24150001 RAL-301_125b 2044 chr2R 24177190 24177262 chr2R 24184725 24184797 412 30 7534 11.5 12.0 11.8 2.3 7607 chr2R 24177190 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184797 intron Nop60B + chr2R_30_24180001 chr2R_24180001 RAL-301_125b 2045 chr2R 24323573 24323647 chr2R 24323716 24323750 29 139 5.5 12.5 9.0 2.9 177 chr2R 24323573 intergenic not near genes chr2R 24323662 intergenic not near genes chr2R 24323750 intergenic not near genes chr2R_29_24320001 chr2R_24320001 RAL-301_125b 2046 chr2R 24353385 24353421 chr2R 24361797 24361820 roo 13 8411 19.5 17.5 18.5 0.7 8435 chr2R 24353385 intron,intron bs +,CR44811 - chr2R 24357602 intron,intron bs +,CR44811 - chr2R 24361820 intron,intron bs +,CR44811 - chr2R_13_24355001 chr2R_24355001 RAL-301_125b 2047 chr2R 24383780 24383853 chr2R 24383911 24383968 38 130 11.5 8.0 9.8 3.5 188 chr2R 24383780 intron mAChR-A - chr2R 24383874 intron mAChR-A - chr2R 24383968 exon mAChR-A - chr2R_38_24380001 chr2R_24380001 RAL-301_125b 2048 chr2R 24415269 24415280 chr2R 24415404 24415415 8 135 19.5 11.0 15.2 0.5 146 chr2R 24415269 3` UTR,3` UTR CG45068 +,CG45069 + chr2R 24415342 intergenic CG45068 +,CG45069 +,prom - chr2R 24415415 3` UTR prom - chr2R_8_24415001 chr2R_24415001 RAL-301_125b 2049 chr2R 24415281 24415343 chr2R 24415401 24415478 36 134 6.0 9.0 7.5 4.2 197 chr2R 24415281 3` UTR,3` UTR CG45068 +,CG45069 + chr2R 24415380 intergenic prom -,CG45068 +,CG45069 + chr2R 24415478 3` UTR prom - chr2R_36_24415001 chr2R_24415001 RAL-301_125b 2050 chr2R 24493037 24493119 chr2R 24493176 24493255 25 138 2.0 7.5 4.8 4.3 218 chr2R 24493037 intergenic CG13589 -,CG13590 - chr2R 24493146 intergenic CG13590 -,CG13589 - chr2R 24493255 3` UTR CG13590 - chr2R_25_24490001 chr2R_24490001 RAL-301_125b 2051 chr2R 24630502 24630582 chr2R 24630751 24630831 30 249 5.0 5.0 5.0 5.0 329 chr2R 24630502 intron CG13594 - chr2R 24630666 intron CG13594 - chr2R 24630831 intron CG13594 - chr2R_30_24630001 chr2R_24630001 RAL-301_125b 2052 chr2R 24644669 24644745 chr2R 24644937 24645008 38 265 9.0 7.0 8.0 4.2 339 chr2R 24644669 intergenic not near genes chr2R 24644838 intergenic not near genes chr2R 24645008 intergenic not near genes chr2R_38_24640001 chr2R_24640001 RAL-301_125b 2053 chr2R 24647546 24647611 chr2R 24655153 24655218 412 33 7606 12.0 13.0 12.5 2.4 7672 chr2R 24647546 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655218 intergenic not near genes chr2R_33_24650001 chr2R_24650001 RAL-301_125b 2054 chr2R 24665971 24666044 chr2R 24666114 24666169 41 141 10.0 8.0 9.0 4.1 198 chr2R 24665971 5` UTR CG34214 - chr2R 24666070 intergenic CG34214 -,CG4806 - chr2R 24666169 3` UTR CG4806 - chr2R_41_24665001 chr2R_24665001 RAL-301_125b 2055 chr2R 24705536 24705586 chr2R 24705664 24705697 8 118 16.5 11.5 14.0 0.5 161 chr2R 24705536 intron Mid1 - chr2R 24705616 intron Mid1 - chr2R 24705697 intron Mid1 - chr2R_8_24705001 chr2R_24705001 RAL-301_125b 2056 chr2R 24722322 24722363 chr2R 24722454 24722495 19 132 12.5 8.0 10.2 1.7 173 chr2R 24722322 intron Mid1 - chr2R 24722408 intron Mid1 - chr2R 24722495 intron Mid1 - chr2R_19_24720001 chr2R_24720001 RAL-301_125b 2057 chr2R 24722364 24722392 chr2R 24722453 24722524 15 129 6.5 7.5 7.0 1.9 160 chr2R 24722364 intron Mid1 - chr2R 24722444 intron Mid1 - chr2R 24722524 intron Mid1 - chr2R_15_24720001 chr2R_24720001 RAL-301_125b 2058 chr2R 24727842 24727855 chr2R 24735400 24735413 mdg1 4 7558 14.5 8.5 11.5 0.3 7571 chr2R 24727842 intron Mid1 - chr2R 24731628 intron Mid1 - chr2R 24735413 intron Mid1 - chr2R_4_24730001 chr2R_24730001 RAL-301_125b 2059 chr2R 24727861 24727906 chr2R 24735399 24735464 mdg1 13 7548 4.5 8.5 6.5 1.7 7603 chr2R 24727861 intron Mid1 - chr2R 24731662 intron Mid1 - chr2R 24735464 intron Mid1 - chr2R_13_24730001 chr2R_24730001 RAL-301_125b 2060 chr2R 24735714 24735743 chr2R 24735841 24735859 13 124 9.5 24.5 17.0 0.7 145 chr2R 24735714 intron Mid1 - chr2R 24735786 intron Mid1 - chr2R 24735859 intron Mid1 - chr2R_13_24735001 chr2R_24735001 RAL-301_125b 2061 chr2R 24737101 24737173 chr2R 24737266 24737343 32 166 7.0 6.5 6.8 4.1 242 chr2R 24737101 intergenic Mid1 - chr2R 24737222 intergenic not near genes chr2R 24737343 intergenic not near genes chr2R_32_24735001 chr2R_24735001 RAL-301_125b 2062 chr2R 24739604 24739640 chr2R 24739727 24739727 7 116 12.5 10.0 11.2 0.6 123 chr2R 24739604 intergenic CR44828 - chr2R 24739666 intergenic CR44828 - chr2R 24739727 intergenic CR44828 - chr2R_7_24735001 chr2R_24735001 RAL-301_125b 2063 chr2R 24739641 24739674 chr2R 24739721 24739779 10 100 8.5 9.5 9.0 1.0 138 chr2R 24739641 intergenic CR44828 - chr2R 24739710 intergenic CR44828 - chr2R 24739779 intergenic CR44828 - chr2R_10_24735001 chr2R_24735001 RAL-301_125b 2064 chr2R 24763566 24763591 chr2R 24765587 24765592 G2 9 2022 16.0 7.0 11.5 0.7 2026 chr2R 24763566 exon CG3894 + chr2R 24764579 intron CG3894 + chr2R 24765592 exon CG3894 + chr2R_9_24760001 chr2R_24760001 RAL-301_125b 2065 chr2R 24763594 24763637 chr2R 24765586 24765663 G2 18 2017 7.0 7.0 7.0 2.2 2069 chr2R 24763594 exon CG3894 + chr2R 24764628 intron CG3894 + chr2R 24765663 exon CG3894 + chr2R_18_24760001 chr2R_24760001 RAL-301_125b 2066 chr2R 24859791 24859869 chr2R 24859927 24860005 24 134 4.5 1.5 3.0 6.0 214 chr2R 24859791 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24860005 5` UTR CR44829 + chr2R_24_24855001 chr2R_24855001 RAL-301_125b 2067 chr2R 24876320 24876340 chr2R 24876631 24876639 4 303 44.5 45.0 44.8 0.1 319 chr2R 24876320 intergenic CG44247 +,CG30423 - chr2R 24876480 intergenic CG44247 + chr2R 24876639 intergenic CG44247 + chr2R_4_24875001 chr2R_24875001 RAL-301_125b 2068 chr2R 24876317 24876359 chr2R 24876640 24876675 10 319 47.0 43.0 45.0 0.2 358 chr2R 24876317 intergenic CG44247 +,CG30423 - chr2R 24876496 intergenic CG44247 + chr2R 24876675 intergenic CG44247 + chr2R_10_24875001 chr2R_24875001 RAL-301_125b 2069 chr2R 24884005 24884076 chr2R 24884136 24884208 40 132 13.0 10.0 11.5 3.2 203 chr2R 24884005 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884208 intron NKAIN + chr2R_40_24880001 chr2R_24880001 RAL-301_125b 2070 chr2R 25004848 25004914 chr2R 25004976 25005042 33 126 7.0 8.5 7.8 3.7 194 chr2R 25004848 intron zip - chr2R 25004945 intron zip - chr2R 25005042 intron zip - chr2R_33_25000001 chr2R_25000001 RAL-301_125b 2071 chr2R 25014503 25014519 chr2R 25014624 25014638 5 117 16.5 12.0 14.2 0.3 135 chr2R 25014503 intron uzip + chr2R 25014570 intron uzip + chr2R 25014638 intron uzip + chr2R_5_25010001 chr2R_25010001 RAL-301_125b 2072 chr2R 25014545 25014569 chr2R 25014622 25014689 4 103 9.5 12.5 11.0 0.3 144 chr2R 25014545 intron uzip + chr2R 25014617 intron uzip + chr2R 25014689 intron uzip + chr2R_4_25010001 chr2R_25010001 RAL-301_125b 2073 chr2R 25018297 25018365 chr2R 25018448 25018501 25 150 9.0 9.5 9.2 2.5 204 chr2R 25018297 intron uzip + chr2R 25018399 intron uzip + chr2R 25018501 intron uzip + chr2R_25_25015001 chr2R_25015001 RAL-301_125b 2074 chr2R 25022595 25022668 chr2R 25022729 25022802 40 134 11.0 9.0 10.0 3.6 207 chr2R 25022595 intron uzip + chr2R 25022698 intron uzip + chr2R 25022802 intron uzip + chr2R_40_25020001 chr2R_25020001 RAL-301_125b 2075 chr2R 25053097 25053118 chr2R 25053225 25053246 10 128 20.5 10.0 15.2 0.6 149 chr2R 25053097 intergenic not near genes chr2R 25053172 intergenic not near genes chr2R 25053246 intergenic not near genes chr2R_10_25050001 chr2R_25050001 RAL-301_125b 2076 chr2R 25061949 25062012 chr2R 25062078 25062140 32 128 7.5 9.5 8.5 3.4 191 chr2R 25061949 intergenic gsb + chr2R 25062044 5` UTR gsb + chr2R 25062140 5` UTR gsb + chr2R_32_25060001 chr2R_25060001 RAL-301_125b 2077 chr2R 25080259 25080339 chr2R 25080679 25080763 27 422 4.0 7.5 5.8 4.0 504 chr2R 25080259 intron gol - chr2R 25080511 intron gol - chr2R 25080763 intron gol - chr2R_27_25080001 chr2R_25080001 RAL-301_125b 2078 chr2R 25081571 25081633 chr2R 25082717 25082779 27 1143 11.0 12.0 11.5 2.2 1208 chr2R 25081571 intron gol - chr2R 25082175 intron gol - chr2R 25082779 intron gol - chr2R_27_25080001 chr2R_25080001 RAL-301_125b 2079 chr2R 25101227 25101299 chr2R 25101379 25101451 35 151 11.0 9.0 10.0 3.2 224 chr2R 25101227 intron lov - chr2R 25101339 intron lov - chr2R 25101451 intron lov - chr2R_35_25100001 chr2R_25100001 RAL-301_125b 2080 chr2R 25122913 25122991 chr2R 25123042 25123120 29 127 9.0 12.5 10.8 2.5 207 chr2R 25122913 intron lov - chr2R 25123016 intron lov - chr2R 25123120 intron lov - chr2R_29_25120001 chr2R_25120001 RAL-301_125b 2081 chr2R 25141613 25141675 chr2R 25159353 25159415 roo 21 17739 8.0 13.5 10.8 1.8 17802 chr2R 25141613 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159415 intergenic not near genes chr2R_21_25150001 chr2R_25150001 RAL-301_125b 2082 chr2R 25176851 25176918 chr2R 25177168 25177235 20 317 10.5 4.5 7.5 2.4 384 chr2R 25176851 intergenic Peb - chr2R 25177043 intergenic Peb - chr2R 25177235 intergenic not near genes chr2R_20_25175001 chr2R_25175001 RAL-301_125b 2083 chr2R 25180715 25180787 chr2R 25180844 25180914 20 127 5.5 5.0 5.2 3.2 199 chr2R 25180715 intergenic not near genes chr2R 25180814 intergenic not near genes chr2R 25180914 intergenic not near genes chr2R_20_25180001 chr2R_25180001 RAL-301_125b 2084 chr2R 25181056 25181124 chr2R 25181203 25181271 20 146 8.0 9.0 8.5 2.1 215 chr2R 25181056 intergenic not near genes chr2R 25181164 intergenic not near genes chr2R 25181271 intergenic not near genes chr2R_20_25180001 chr2R_25180001 RAL-301_125b 2085 chr2R 25191685 25191719 chr2R 25191813 25191847 8 127 6.5 8.5 7.5 0.9 162 chr2R 25191685 intron CG9380 - chr2R 25191766 intron CG9380 - chr2R 25191847 intron CG9380 - chr2R_8_25190001 chr2R_25190001 RAL-301_125b 2086 chr2R 25193296 25193370 chr2R 25193488 25193564 18 193 1.5 8.5 5.0 3.0 268 chr2R 25193296 intron CG9380 - chr2R 25193430 intron CG9380 - chr2R 25193564 intron CG9380 - chr2R_18_25190001 chr2R_25190001 RAL-301_125b 2087 chr2R 25235980 25236041 chr2R 25236142 25236202 18 160 4.5 7.0 5.8 2.6 222 chr2R 25235980 intron CG9380 - chr2R 25236091 intron CG9380 - chr2R 25236202 intron CG9380 - chr2R_18_25235001 chr2R_25235001 RAL-301_125b 2088 chr2R 25253403 25253466 chr2R 25253529 25253593 12 126 8.5 8.5 8.5 1.3 190 chr2R 25253403 intron,intron CG9380 -,CG30428 + chr2R 25253498 intron,intron CG9380 -,CG30428 + chr2R 25253593 intron,5` UTR CG9380 -,CG30428 + chr2R_12_25250001 chr2R_25250001 RAL-301_125b 2089 chr3L 52866 52934 chr3L 53000 53042 30 132 13.0 12.5 12.8 2.2 176 chr3L 52866 intergenic not near genes chr3L 52954 intergenic not near genes chr3L 53042 intergenic not near genes chr3L_30_50001 chr3L_50001 RAL-301_125b 2090 chr3L 68939 69009 chr3L 69070 69146 34 135 6.5 11.0 8.8 3.5 207 chr3L 68939 3` UTR Lsp1gamma + chr3L 69042 intergenic Lsp1gamma +,CR44510 + chr3L 69146 5` UTR CR44510 + chr3L_34_65001 chr3L_65001 RAL-301_125b 2091 chr3L 88699 88772 chr3L 90669 90742 35 1969 9.0 10.0 9.5 3.3 2043 chr3L 88699 intergenic not near genes chr3L 89720 intergenic not near genes chr3L 90742 intergenic not near genes chr3L_35_85001 chr3L_85001 RAL-301_125b 2092 chr3L 110168 110243 chr3L 119385 119408 roo 28 9215 7.0 10.5 8.8 2.9 9240 chr3L 110168 intergenic not near genes chr3L 114788 intergenic not near genes chr3L 119408 intergenic not near genes chr3L_28_110001 chr3L_110001 RAL-301_125b 2093 chr3L 343156 343177 chr3L 343322 343350 12 172 19.5 17.5 18.5 0.6 194 chr3L 343156 intron Ptpmeg + chr3L 343253 intron Ptpmeg + chr3L 343350 intron Ptpmeg + chr3L_12_340001 chr3L_340001 RAL-301_125b 2094 chr3L 402652 402677 chr3L 409755 409780 297 12 7100 17.5 10.5 14.0 0.8 7128 chr3L 402652 intergenic not near genes chr3L 406216 intergenic not near genes chr3L 409780 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-301_125b 2095 chr3L 402681 402708 chr3L 409753 409811 297 11 7092 9.0 9.5 9.2 1.1 7130 chr3L 402681 intergenic not near genes chr3L 406246 intergenic not near genes chr3L 409811 intergenic not near genes chr3L_11_405001 chr3L_405001 RAL-301_125b 2096 chr3L 421018 421069 chr3L 421164 421215 25 145 11.0 11.5 11.2 2.0 197 chr3L 421018 intergenic not near genes chr3L 421116 intergenic not near genes chr3L 421215 intergenic not near genes chr3L_25_420001 chr3L_420001 RAL-301_125b 2097 chr3L 428141 428222 chr3L 428312 428359 13 160 6.5 1.0 3.8 2.7 218 chr3L 428141 intergenic not near genes chr3L 428250 intergenic not near genes chr3L 428359 intergenic not near genes chr3L_13_425001 chr3L_425001 RAL-301_125b 2098 chr3L 506380 506410 chr3L 506527 506557 11 147 8.5 11.0 9.8 1.0 177 chr3L 506380 intron klar - chr3L 506468 intron klar - chr3L 506557 intron klar - chr3L_11_505001 chr3L_505001 RAL-301_125b 2099 chr3L 561442 561465 chr3L 561562 561592 14 124 17.0 1.0 9.0 1.4 150 chr3L 561442 intron hipk + chr3L 561517 intron hipk + chr3L 561592 intron hipk + chr3L_14_560001 chr3L_560001 RAL-301_125b 2100 chr3L 561473 561477 chr3L 10689491 10689495 4 10128018 16.0 25.0 20.5 0.2 10128022 chr3L 561473 intron hipk + chr3L 5625484 intergenic not near genes chr3L 10689495 3` UTR simj + chr3L_4_5625001 chr3L_5625001 RAL-301_125b 2101 chr3L 564438 564511 chr3L 564580 564653 33 139 8.5 10.5 9.5 3.1 215 chr3L 564438 intron hipk + chr3L 564546 intron hipk + chr3L 564653 intron hipk + chr3L_33_560001 chr3L_560001 RAL-301_125b 2102 chr3L 566750 566824 chr3L 567152 567202 28 401 9.5 7.5 8.5 2.9 452 chr3L 566750 intron hipk + chr3L 566976 intron hipk + chr3L 567202 intron hipk + chr3L_28_565001 chr3L_565001 RAL-301_125b 2103 chr3L 586538 586554 chr3L 587567 587583 7 1029 17.0 7.0 12.0 0.5 1045 chr3L 586538 intron Kah - chr3L 587060 intron Kah - chr3L 587583 intron Kah - chr3L_7_585001 chr3L_585001 RAL-301_125b 2104 chr3L 586558 586594 chr3L 587552 587623 17 1024 8.0 6.0 7.0 2.1 1065 chr3L 586558 intron Kah - chr3L 587090 intron Kah - chr3L 587623 intron Kah - chr3L_17_585001 chr3L_585001 RAL-301_125b 2105 chr3L 592921 592967 chr3L 593047 593093 13 126 9.5 8.0 8.8 1.3 172 chr3L 592921 intergenic MED14 + chr3L 593007 intergenic MED14 + chr3L 593093 intergenic MED14 + chr3L_13_590001 chr3L_590001 RAL-301_125b 2106 chr3L 603006 603032 chr3L 603139 603165 14 133 18.5 0.0 9.2 1.4 159 chr3L 603006 intron CG13893 - chr3L 603086 intron CG13893 - chr3L 603165 intron CG13893 - chr3L_14_600001 chr3L_600001 RAL-301_125b 2107 chr3L 606847 606923 chr3L 606973 607052 21 127 5.5 7.0 6.2 2.9 205 chr3L 606847 intergenic Reg-2 - chr3L 606950 intergenic Reg-2 - chr3L 607052 intergenic Reg-2 - chr3L_21_605001 chr3L_605001 RAL-301_125b 2108 chr3L 642432 642493 chr3L 642573 642634 25 140 12.5 7.5 10.0 2.3 202 chr3L 642432 5` UTR CR43334 + chr3L 642533 5` UTR CR43334 + chr3L 642634 5` UTR CR43334 + chr3L_25_640001 chr3L_640001 RAL-301_125b 2109 chr3L 651345 651413 chr3L 651483 651551 33 138 11.5 13.5 12.5 2.4 206 chr3L 651345 intergenic Gale +,CG3402 - chr3L 651448 intergenic CG3402 -,Gale + chr3L 651551 3` UTR CG3402 - chr3L_33_650001 chr3L_650001 RAL-301_125b 2110 chr3L 670029 670055 chr3L 670131 670151 10 113 5.0 12.5 8.8 1.0 122 chr3L 670029 intergenic not near genes chr3L 670090 intergenic not near genes chr3L 670151 intergenic not near genes chr3L_10_670001 chr3L_670001 RAL-301_125b 2111 chr3L 705859 705862 chr3L 706005 706008 5 146 23.0 12.0 17.5 0.3 149 chr3L 705859 intergenic CG13895 -,CR44514 + chr3L 705934 intergenic CG13895 -,CR44514 + chr3L 706008 3` UTR CG13895 - chr3L_5_705001 chr3L_705001 RAL-301_125b 2112 chr3L 705863 705927 chr3L 705998 706073 26 146 8.0 11.0 9.5 2.5 210 chr3L 705863 intergenic CG13895 -,CR44514 + chr3L 705968 3` UTR CG13895 - chr3L 706073 3` UTR CG13895 - chr3L_26_705001 chr3L_705001 RAL-301_125b 2113 chr3L 748158 748239 chr3L 748287 748368 28 129 11.0 8.0 9.5 2.7 210 chr3L 748158 intron hng3 - chr3L 748263 intron hng3 - chr3L 748368 intron hng3 - chr3L_28_745001 chr3L_745001 RAL-301_125b 2114 chr3L 761147 761197 chr3L 761274 761324 19 127 14.5 8.5 11.5 1.5 177 chr3L 761147 intergenic not near genes chr3L 761236 intergenic not near genes chr3L 761324 intergenic not near genes chr3L_19_760001 chr3L_760001 RAL-301_125b 2115 chr3L 772688 772693 chr3L 772819 772819 5 130 10.0 10.5 10.2 0.4 131 chr3L 772688 intergenic not near genes chr3L 772754 intergenic not near genes chr3L 772819 intergenic not near genes chr3L_5_770001 chr3L_770001 RAL-301_125b 2116 chr3L 789863 789947 chr3L 790398 790483 roo 16 531 0.0 0.0 0.0 16.0 620 chr3L 789863 intergenic not near genes chr3L 790173 intergenic not near genes chr3L 790483 intergenic not near genes chr3L_16_790001 chr3L_790001 RAL-301_125b 2117 chr3L 822058 822070 chr3L 822188 822200 7 130 0.0 18.5 9.2 0.7 142 chr3L 822058 intergenic not near genes chr3L 822129 intergenic not near genes chr3L 822200 intergenic not near genes chr3L_7_820001 chr3L_820001 RAL-301_125b 2118 chr3L 857951 858026 chr3L 866482 866549 Tirant 25 8522 8.5 10.0 9.2 2.5 8598 chr3L 857951 intergenic not near genes chr3L 862250 intergenic not near genes chr3L 866549 5` UTR CG12502 + chr3L_25_860001 chr3L_860001 RAL-301_125b 2119 chr3L 922127 922181 chr3L 922251 922313 25 127 11.0 6.5 8.8 2.6 186 chr3L 922127 intron Glut1 + chr3L 922220 intron Glut1 + chr3L 922313 intron Glut1 + chr3L_25_920001 chr3L_920001 RAL-301_125b 2120 chr3L 925128 925209 chr3L 932604 932685 mdg1 32 7476 5.5 12.0 8.8 3.3 7557 chr3L 925128 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932685 intron Glut1 + chr3L_32_925001 chr3L_925001 RAL-301_125b 2121 chr3L 933866 933938 chr3L 934020 934091 33 153 8.0 10.0 9.0 3.3 225 chr3L 933866 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934091 intron Glut1 + chr3L_33_930001 chr3L_930001 RAL-301_125b 2122 chr3L 939733 939795 chr3L 940904 940966 jockey 27 1170 10.0 3.5 6.8 3.5 1233 chr3L 939733 intron Glut1 + chr3L 940350 intron Glut1 + chr3L 940966 intron Glut1 + chr3L_27_940001 chr3L_940001 RAL-301_125b 2123 chr3L 949860 949865 chr3L 949986 949991 5 126 0.0 13.0 6.5 0.7 131 chr3L 949860 intron Glut1 + chr3L 949926 intron Glut1 + chr3L 949991 intron Glut1 + chr3L_5_945001 chr3L_945001 RAL-301_125b 2124 chr3L 949866 949880 chr3L 949982 950006 9 125 0.0 12.0 6.0 1.3 140 chr3L 949866 intron Glut1 + chr3L 949936 intron Glut1 + chr3L 950006 intron Glut1 + chr3L_9_945001 chr3L_945001 RAL-301_125b 2125 chr3L 973943 973979 chr3L 974059 974105 14 123 6.0 12.0 9.0 1.4 162 chr3L 973943 intron Glut1 + chr3L 974024 intron Glut1 + chr3L 974105 intron Glut1 + chr3L_14_970001 chr3L_970001 RAL-301_125b 2126 chr3L 1003013 1003069 chr3L 1003140 1003196 33 126 8.5 11.5 10.0 3.0 183 chr3L 1003013 intron trio - chr3L 1003104 intron trio - chr3L 1003196 intron trio - chr3L_33_1000001 chr3L_1000001 RAL-301_125b 2127 chr3L 1010949 1011018 chr3L 1011080 1011139 24 130 9.0 2.0 5.5 3.7 190 chr3L 1010949 intron trio - chr3L 1011044 intron trio - chr3L 1011139 intron trio - chr3L_24_1010001 chr3L_1010001 RAL-301_125b 2128 chr3L 1014976 1015055 chr3L 1015138 1015192 24 154 4.5 7.0 5.8 3.5 216 chr3L 1014976 intron trio - chr3L 1015084 intron trio - chr3L 1015192 intron trio - chr3L_24_1015001 chr3L_1015001 RAL-301_125b 2129 chr3L 1021331 1021403 chr3L 1021461 1021531 31 130 4.0 9.0 6.5 4.1 200 chr3L 1021331 intron trio - chr3L 1021431 intron trio - chr3L 1021531 intron trio - chr3L_31_1020001 chr3L_1020001 RAL-301_125b 2130 chr3L 1040507 1040580 chr3L 1040640 1040714 32 132 6.5 6.5 6.5 4.3 207 chr3L 1040507 intron bab1 - chr3L 1040610 intron bab1 - chr3L 1040714 intron bab1 - chr3L_32_1040001 chr3L_1040001 RAL-301_125b 2131 chr3L 1047309 1047385 chr3L 1055171 1055216 412 25 7853 5.5 9.0 7.2 3.0 7907 chr3L 1047309 intron bab1 - chr3L 1051262 intron bab1 - chr3L 1055216 intron bab1 - chr3L_25_1050001 chr3L_1050001 RAL-301_125b 2132 chr3L 1063292 1063366 chr3L 1063712 1063792 33 424 9.0 8.5 8.8 3.4 500 chr3L 1063292 intron bab1 - chr3L 1063542 intron bab1 - chr3L 1063792 intron bab1 - chr3L_33_1060001 chr3L_1060001 RAL-301_125b 2133 chr3L 1094979 1095018 chr3L 1095110 1095149 14 127 12.0 10.5 11.2 1.1 170 chr3L 1094979 intron bab1 - chr3L 1095064 intron bab1 - chr3L 1095149 intron bab1 - chr3L_14_1095001 chr3L_1095001 RAL-301_125b 2134 chr3L 1095019 1095043 chr3L 1095106 1095174 15 119 9.0 10.0 9.5 1.4 155 chr3L 1095019 intron bab1 - chr3L 1095096 intron bab1 - chr3L 1095174 intron bab1 - chr3L_15_1095001 chr3L_1095001 RAL-301_125b 2135 chr3L 1103973 1104005 chr3L 1104207 1104246 16 240 13.5 12.5 13.0 1.1 273 chr3L 1103973 intergenic not near genes chr3L 1104110 intergenic not near genes chr3L 1104246 intergenic not near genes chr3L_16_1100001 chr3L_1100001 RAL-301_125b 2136 chr3L 1104008 1104013 chr3L 1104199 1104254 7 233 10.5 12.0 11.2 0.6 246 chr3L 1104008 intergenic not near genes chr3L 1104131 intergenic not near genes chr3L 1104254 intergenic not near genes chr3L_7_1100001 chr3L_1100001 RAL-301_125b 2137 chr3L 1154077 1154158 chr3L 1163280 1163358 roo 33 9200 9.0 8.0 8.5 3.5 9281 chr3L 1154077 intron bab2 - chr3L 1158718 intron bab2 - chr3L 1163358 intron bab2 - chr3L_33_1155001 chr3L_1155001 RAL-301_125b 2138 chr3L 1166974 1166987 chr3L 1167101 1167114 8 127 9.0 7.0 8.0 0.9 140 chr3L 1166974 intron bab2 - chr3L 1167044 intron bab2 - chr3L 1167114 intron bab2 - chr3L_8_1165001 chr3L_1165001 RAL-301_125b 2139 chr3L 1219558 1219566 chr3L 1227341 1227349 412 7 7782 16.0 16.5 16.2 0.4 7791 chr3L 1219558 intron mwh + chr3L 1223454 intron mwh + chr3L 1227349 intron mwh + chr3L_7_1220001 chr3L_1220001 RAL-301_125b 2140 chr3L 1219568 1219612 chr3L 1227335 1227395 412 20 7778 8.5 13.0 10.8 1.7 7827 chr3L 1219568 intron mwh + chr3L 1223482 intron mwh + chr3L 1227395 intron mwh + chr3L_20_1220001 chr3L_1220001 RAL-301_125b 2141 chr3L 1257962 1257968 chr3L 1258106 1258111 4 144 12.0 4.0 8.0 0.4 149 chr3L 1257962 intron CG9134 + chr3L 1258036 intron CG9134 + chr3L 1258111 intron CG9134 + chr3L_4_1255001 chr3L_1255001 RAL-301_125b 2142 chr3L 1260102 1260160 chr3L 1260232 1260290 17 130 6.0 10.0 8.0 1.9 188 chr3L 1260102 intron CG9134 + chr3L 1260196 intron CG9134 + chr3L 1260290 intron CG9134 + chr3L_17_1260001 chr3L_1260001 RAL-301_125b 2143 chr3L 1285285 1285362 chr3L 1285425 1285468 19 136 1.5 9.5 5.5 2.9 183 chr3L 1285285 intron CG32333 + chr3L 1285376 intron CG32333 + chr3L 1285468 intron CG32333 + chr3L_19_1285001 chr3L_1285001 RAL-301_125b 2144 chr3L 1314999 1315052 chr3L 1315105 1315168 24 117 55.0 52.5 53.8 0.4 169 chr3L 1314999 exon CG9153 + chr3L 1315084 exon CG9153 + chr3L 1315168 exon CG9153 + chr3L_24_1315001 chr3L_1315001 RAL-301_125b 2145 chr3L 1310988 1311005 chr3L 1315798 1315820 11 4810 47.0 70.0 58.5 0.2 4832 chr3L 1310988 exon CG2469 + chr3L 1313404 intergenic CG9186 -,CG9153 + chr3L 1315820 exon CG9153 + chr3L_11_1310001 chr3L_1310001 RAL-301_125b 2146 chr3L 1310982 1311060 chr3L 1315821 1315871 19 4819 55.0 60.0 57.5 0.3 4889 chr3L 1310982 exon CG2469 + chr3L 1313426 intergenic CG9186 -,CG9153 + chr3L 1315871 exon CG9153 + chr3L_19_1310001 chr3L_1310001 RAL-301_125b 2147 chr3L 1323796 1323863 chr3L 1323936 1324003 24 140 3.5 6.5 5.0 4.0 207 chr3L 1323796 intron,intron Myo61F +,CR45166 - chr3L 1323900 intron,intron Myo61F +,CR45166 - chr3L 1324003 intron,3` UTR Myo61F +,CR45166 - chr3L_24_1320001 chr3L_1320001 RAL-301_125b 2148 chr3L 1356975 1357011 chr3L 1357097 1357123 22 123 18.0 19.5 18.8 1.1 148 chr3L 1356975 intron Ptp61F - chr3L 1357049 intron Ptp61F - chr3L 1357123 intron Ptp61F - chr3L_22_1355001 chr3L_1355001 RAL-301_125b 2149 chr3L 1396715 1396754 chr3L 1396823 1396888 15 131 11.0 9.5 10.2 1.3 173 chr3L 1396715 intron Ptp61F - chr3L 1396802 intron Ptp61F - chr3L 1396888 intron Ptp61F - chr3L_15_1395001 chr3L_1395001 RAL-301_125b 2150 chr3L 1415737 1415805 chr3L 1415861 1415926 32 126 6.0 9.5 7.8 3.6 189 chr3L 1415737 intron Ptp61F - chr3L 1415832 intron Ptp61F - chr3L 1415926 intron Ptp61F - chr3L_32_1415001 chr3L_1415001 RAL-301_125b 2151 chr3L 1424757 1424770 chr3L 1430024 1430064 Rt1a 9 5288 1.5 10.5 6.0 1.3 5307 chr3L 1424757 intron Ptp61F - chr3L 1427410 intron Ptp61F - chr3L 1430064 intron Ptp61F - chr3L_9_1425001 chr3L_1425001 RAL-301_125b 2152 chr3L 1441347 1441404 chr3L 1441475 1441532 18 125 11.5 9.0 10.2 1.6 185 chr3L 1441347 intron Ptp61F - chr3L 1441440 intron Ptp61F - chr3L 1441532 intron Ptp61F - chr3L_18_1440001 chr3L_1440001 RAL-301_125b 2153 chr3L 1485689 1485738 chr3L 1486910 1486947 1360 21 1216 8.5 11.5 10.0 1.9 1258 chr3L 1485689 intron stet - chr3L 1486318 intron stet - chr3L 1486947 intron stet - chr3L_21_1485001 chr3L_1485001 RAL-301_125b 2154 chr3L 1501963 1502016 chr3L 1502094 1502147 28 129 1.5 13.0 7.2 3.4 184 chr3L 1501963 intron pUf68 - chr3L 1502055 intron pUf68 - chr3L 1502147 intron pUf68 - chr3L_28_1500001 chr3L_1500001 RAL-301_125b 2155 chr3L 1505955 1506020 chr3L 1513602 1513667 17.6 27 7647 11.5 9.5 10.5 2.3 7712 chr3L 1505955 intron,intron Psa +,cue - chr3L 1509811 intron,intron Psa +,cue - chr3L 1513667 intron,intron Psa +,cue - chr3L_27_1505001 chr3L_1505001 RAL-301_125b 2156 chr3L 1528190 1528253 chr3L 1528310 1528348 9 117 10.5 14.5 12.5 0.7 158 chr3L 1528190 intron CG12090 - chr3L 1528269 intron CG12090 - chr3L 1528348 intron CG12090 - chr3L_9_1525001 chr3L_1525001 RAL-301_125b 2157 chr3L 1571419 1571493 chr3L 1571554 1571629 20 136 8.0 9.5 8.8 2.0 210 chr3L 1571419 intron CG12004 + chr3L 1571524 intron CG12004 + chr3L 1571629 intron CG12004 + chr3L_20_1570001 chr3L_1570001 RAL-301_125b 2158 chr3L 1585885 1585936 chr3L 1586016 1586067 24 131 11.0 5.5 8.2 2.6 182 chr3L 1585885 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586067 intron CG13917 + chr3L_24_1585001 chr3L_1585001 RAL-301_125b 2159 chr3L 1592253 1592264 chr3L 1592445 1592456 6 192 7.5 18.5 13.0 0.4 203 chr3L 1592253 intron CG13917 + chr3L 1592354 intron CG13917 + chr3L 1592456 intron CG13917 + chr3L_6_1590001 chr3L_1590001 RAL-301_125b 2160 chr3L 1614845 1614900 chr3L 1615035 1615106 24 201 2.0 8.5 5.2 3.9 261 chr3L 1614845 intron,intron,exon CG18170 +,CG33791 +,CG12105 - chr3L 1614976 intron,intron,exon CG18170 +,CG33791 +,CG12105 - chr3L 1615106 intron,intron,exon CG18170 +,CG33791 +,CG12105 - chr3L_24_1610001 chr3L_1610001 RAL-301_125b 2161 chr3L 1740819 1740886 chr3L 1741112 1741178 pogo 15 291 7.5 10.5 9.0 1.5 359 chr3L 1740819 intron Gk + chr3L 1740998 intron Gk + chr3L 1741178 intron Gk + chr3L_15_1740001 chr3L_1740001 RAL-301_125b 2162 chr3L 1754086 1754143 chr3L 1755878 1755928 7 1790 26.0 40.0 33.0 0.2 1842 chr3L 1754086 exon Cht2 - chr3L 1755007 intron Cht2 - chr3L 1755928 5` UTR Cht2 - chr3L_7_1755001 chr3L_1755001 RAL-301_125b 2163 chr3L 1823803 1823881 chr3L 1824122 1824200 40 318 10.0 4.5 7.2 4.9 397 chr3L 1823803 intergenic Cpr62Ba - chr3L 1824002 intergenic Cpr62Ba - chr3L 1824200 3` UTR Cpr62Ba - chr3L_40_1820001 chr3L_1820001 RAL-301_125b 2164 chr3L 1852999 1853055 chr3L 1853133 1853189 27 134 8.5 8.0 8.2 2.9 190 chr3L 1852999 intron CG13936 - chr3L 1853094 intron CG13936 - chr3L 1853189 intron CG13936 - chr3L_27_1850001 chr3L_1850001 RAL-301_125b 2165 chr3L 1882314 1882381 chr3L 1882460 1882526 6 146 9.0 3.5 6.2 0.8 212 chr3L 1882314 intron CG13937 - chr3L 1882420 intron CG13937 - chr3L 1882526 intron CG13937 - chr3L_6_1880001 chr3L_1880001 RAL-301_125b 2166 chr3L 1905299 1905373 chr3L 1905443 1905517 20 144 8.5 8.5 8.5 2.1 218 chr3L 1905299 intron CG1887 - chr3L 1905408 intron CG1887 - chr3L 1905517 intron CG1887 - chr3L_20_1905001 chr3L_1905001 RAL-301_125b 2167 chr3L 1922424 1922464 chr3L 1922541 1922592 11 115 11.0 8.0 9.5 1.0 168 chr3L 1922424 intron Dbx + chr3L 1922508 intron Dbx + chr3L 1922592 intron Dbx + chr3L_11_1920001 chr3L_1920001 RAL-301_125b 2168 chr3L 1988059 1988065 chr3L 1988249 1988255 5 190 19.0 9.0 14.0 0.3 196 chr3L 1988059 intergenic not near genes chr3L 1988157 intergenic not near genes chr3L 1988255 intergenic not near genes chr3L_5_1985001 chr3L_1985001 RAL-301_125b 2169 chr3L 1988066 1988365 chr3L 1988246 1988501 36 173 17.0 7.5 12.2 2.7 435 chr3L 1988066 intergenic not near genes chr3L 1988284 intergenic not near genes chr3L 1988501 intergenic not near genes chr3L_36_1985001 chr3L_1985001 RAL-301_125b 2170 chr3L 1988366 1988388 chr3L 1988482 1988525 10 134 12.5 9.0 10.8 0.8 159 chr3L 1988366 intergenic not near genes chr3L 1988446 intergenic not near genes chr3L 1988525 intergenic not near genes chr3L_10_1985001 chr3L_1985001 RAL-301_125b 2171 chr3L 2107044 2107141 chr3L 2107208 2107289 25 155 0.0 7.0 3.5 5.6 245 chr3L 2107044 intron sls - chr3L 2107166 intron sls - chr3L 2107289 intron sls - chr3L_25_2105001 chr3L_2105001 RAL-301_125b 2172 chr3L 2108206 2108273 chr3L 2113460 2113527 copia 32 5254 9.5 8.5 9.0 3.2 5321 chr3L 2108206 intron sls - chr3L 2110866 intron sls - chr3L 2113527 intron sls - chr3L_32_2110001 chr3L_2110001 RAL-301_125b 2173 chr3L 2139161 2139227 chr3L 2139292 2139358 29 131 9.0 11.0 10.0 2.6 197 chr3L 2139161 intron zormin - chr3L 2139260 intron zormin - chr3L 2139358 intron zormin - chr3L_29_2135001 chr3L_2135001 RAL-301_125b 2174 chr3L 2199783 2199789 chr3L 2199909 2199915 4 126 12.5 10.5 11.5 0.3 132 chr3L 2199783 intergenic not near genes chr3L 2199849 intergenic not near genes chr3L 2199915 intergenic not near genes chr3L_4_2195001 chr3L_2195001 RAL-301_125b 2175 chr3L 2199793 2199820 chr3L 2199902 2199946 15 125 6.5 9.0 7.8 1.7 153 chr3L 2199793 intergenic not near genes chr3L 2199870 intergenic not near genes chr3L 2199946 intergenic not near genes chr3L_15_2195001 chr3L_2195001 RAL-301_125b 2176 chr3L 2302389 2302449 chr3L 2302907 2302967 23 517 10.5 7.5 9.0 2.3 578 chr3L 2302389 intergenic not near genes chr3L 2302678 intergenic not near genes chr3L 2302967 intergenic not near genes chr3L_23_2300001 chr3L_2300001 RAL-301_125b 2177 chr3L 2307958 2308024 chr3L 2308113 2308180 24 156 11.0 8.5 9.8 2.2 222 chr3L 2307958 intergenic not near genes chr3L 2308069 intergenic not near genes chr3L 2308180 intergenic not near genes chr3L_24_2305001 chr3L_2305001 RAL-301_125b 2178 chr3L 2320335 2320401 chr3L 2320470 2320536 35 134 8.0 8.0 8.0 3.9 201 chr3L 2320335 intergenic CR45426 - chr3L 2320436 intergenic not near genes chr3L 2320536 intergenic not near genes chr3L_35_2320001 chr3L_2320001 RAL-301_125b 2179 chr3L 2355103 2355176 chr3L 2355227 2355256 19 129 8.5 4.5 6.5 2.5 153 chr3L 2355103 intergenic not near genes chr3L 2355180 intergenic not near genes chr3L 2355256 intergenic not near genes chr3L_19_2355001 chr3L_2355001 RAL-301_125b 2180 chr3L 2382683 2382736 chr3L 2382790 2382843 21 124 8.0 6.0 7.0 2.6 160 chr3L 2382683 intergenic not near genes chr3L 2382763 intergenic not near genes chr3L 2382843 intergenic not near genes chr3L_21_2380001 chr3L_2380001 RAL-301_125b 2181 chr3L 2411297 2411341 chr3L 2411420 2411471 15 128 2.5 9.5 6.0 2.1 174 chr3L 2411297 intron CG45186 + chr3L 2411384 intron CG45186 + chr3L 2411471 intron CG45186 + chr3L_15_2410001 chr3L_2410001 RAL-301_125b 2182 chr3L 2447459 2447530 chr3L 2456665 2456736 roo 32 9205 12.0 13.0 12.5 2.4 9277 chr3L 2447459 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456736 intron CG45186 + chr3L_32_2450001 chr3L_2450001 RAL-301_125b 2183 chr3L 2460602 2460677 chr3L 2460788 2460844 18 177 4.5 11.0 7.8 2.0 242 chr3L 2460602 intron CG45186 + chr3L 2460723 intron CG45186 + chr3L 2460844 intron CG45186 + chr3L_18_2460001 chr3L_2460001 RAL-301_125b 2184 chr3L 2467447 2467487 chr3L 2467594 2467643 6 153 9.0 1.5 5.2 1.0 196 chr3L 2467447 intron CG45186 + chr3L 2467545 intron CG45186 + chr3L 2467643 intron CG45186 + chr3L_6_2465001 chr3L_2465001 RAL-301_125b 2185 chr3L 2493776 2493850 chr3L 2493904 2493988 21 136 6.5 1.5 4.0 4.2 212 chr3L 2493776 intron CG45186 + chr3L 2493882 intron CG45186 + chr3L 2493988 intron CG45186 + chr3L_21_2490001 chr3L_2490001 RAL-301_125b 2186 chr3L 2515353 2515424 chr3L 2515479 2515556 45 130 7.5 14.0 10.8 3.8 203 chr3L 2515353 intron Spn - chr3L 2515454 intron Spn - chr3L 2515556 intron Spn - chr3L_45_2515001 chr3L_2515001 RAL-301_125b 2187 chr3L 2533620 2533670 chr3L 2533752 2533802 19 124 10.5 13.0 11.8 1.5 182 chr3L 2533620 intron Spn - chr3L 2533711 intron Spn - chr3L 2533802 intron Spn - chr3L_19_2530001 chr3L_2530001 RAL-301_125b 2188 chr3L 2546713 2546790 chr3L 2546852 2546929 6 139 6.0 2.0 4.0 1.2 216 chr3L 2546713 intron Spn - chr3L 2546821 intron Spn - chr3L 2546929 intron Spn - chr3L_6_2545001 chr3L_2545001 RAL-301_125b 2189 chr3L 2561486 2561554 chr3L 2561613 2561681 31 127 8.0 7.5 7.8 3.5 195 chr3L 2561486 intron msn - chr3L 2561584 intron msn - chr3L 2561681 intron msn - chr3L_31_2560001 chr3L_2560001 RAL-301_125b 2190 chr3L 2575959 2575988 chr3L 2576092 2576116 9 131 12.5 10.5 11.5 0.7 157 chr3L 2575959 intron msn - chr3L 2576038 intron msn - chr3L 2576116 intron msn - chr3L_9_2575001 chr3L_2575001 RAL-301_125b 2191 chr3L 2581849 2581914 chr3L 2581993 2582058 16 144 5.5 5.0 5.2 2.6 209 chr3L 2581849 intron msn - chr3L 2581954 intron msn - chr3L 2582058 intron msn - chr3L_16_2580001 chr3L_2580001 RAL-301_125b 2192 chr3L 2591662 2591740 chr3L 2591798 2591877 42 137 12.5 6.0 9.2 4.1 215 chr3L 2591662 intron dos + chr3L 2591770 intron dos + chr3L 2591877 intron dos + chr3L_42_2590001 chr3L_2590001 RAL-301_125b 2193 chr3L 2609628 2609647 chr3L 2609754 2609773 11 126 21.0 0.0 10.5 1.0 145 chr3L 2609628 intron Pxn - chr3L 2609700 intron Pxn - chr3L 2609773 intron Pxn - chr3L_11_2605001 chr3L_2605001 RAL-301_125b 2194 chr3L 2619210 2619278 chr3L 2619619 2619687 19 409 8.5 2.5 5.5 2.9 477 chr3L 2619210 intron Pxn - chr3L 2619448 intron Pxn - chr3L 2619687 intron Pxn - chr3L_19_2615001 chr3L_2615001 RAL-301_125b 2195 chr3L 2626040 2626102 chr3L 2626191 2626253 24 147 10.0 9.0 9.5 2.3 213 chr3L 2626040 intron Pxn - chr3L 2626146 intron Pxn - chr3L 2626253 intron Pxn - chr3L_24_2625001 chr3L_2625001 RAL-301_125b 2196 chr3L 2633219 2633253 chr3L 2633376 2633410 25 157 10.0 0.0 5.0 4.2 191 chr3L 2633219 intron,intron CG42245 +,MEP-1 + chr3L 2633314 intron,intron CG42245 +,MEP-1 + chr3L 2633410 intron,intron CG42245 +,MEP-1 + chr3L_25_2630001 chr3L_2630001 RAL-301_125b 2197 chr3L 2680463 2680505 chr3L 2680593 2680628 17 130 17.5 0.5 9.0 1.7 165 chr3L 2680463 intron Fife - chr3L 2680546 intron Fife - chr3L 2680628 intron Fife - chr3L_17_2680001 chr3L_2680001 RAL-301_125b 2198 chr3L 2683911 2683976 chr3L 2684032 2684105 15 127 8.0 7.5 7.8 1.7 194 chr3L 2683911 intron Fife - chr3L 2684008 intron Fife - chr3L 2684105 intron Fife - chr3L_15_2680001 chr3L_2680001 RAL-301_125b 2199 chr3L 2719493 2719559 chr3L 2719645 2719711 31 152 12.0 8.0 10.0 2.8 218 chr3L 2719493 3` UTR Mrtf - chr3L 2719602 3` UTR Mrtf - chr3L 2719711 3` UTR Mrtf - chr3L_31_2715001 chr3L_2715001 RAL-301_125b 2200 chr3L 2740782 2740851 chr3L 2740908 2740978 34 127 5.5 7.5 6.5 4.5 196 chr3L 2740782 intron Mrtf - chr3L 2740880 intron Mrtf - chr3L 2740978 intron Mrtf - chr3L_34_2740001 chr3L_2740001 RAL-301_125b 2201 chr3L 2751412 2751456 chr3L 2755757 2755801 F-element 18 4345 11.0 13.5 12.2 1.4 4389 chr3L 2751412 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755801 intron Mrtf - chr3L_18_2750001 chr3L_2750001 RAL-301_125b 2202 chr3L 2766685 2766765 chr3L 2766832 2766912 33 147 6.0 5.5 5.8 4.9 227 chr3L 2766685 intergenic Mrtf -,Non2 + chr3L 2766798 intergenic Non2 +,Mrtf - chr3L 2766912 intergenic Non2 +,Mrtf - chr3L_33_2765001 chr3L_2765001 RAL-301_125b 2203 chr3L 2795673 2795746 chr3L 2795847 2795876 26 170 6.0 7.0 6.5 3.5 203 chr3L 2795673 intron CG43444 - chr3L 2795774 intron CG43444 - chr3L 2795876 intron CG43444 - chr3L_26_2795001 chr3L_2795001 RAL-301_125b 2204 chr3L 2799072 2799108 chr3L 2799204 2799240 13 131 7.0 2.5 4.8 2.2 168 chr3L 2799072 intron CG43444 - chr3L 2799156 intron CG43444 - chr3L 2799240 intron CG43444 - chr3L_13_2795001 chr3L_2795001 RAL-301_125b 2205 chr3L 2810005 2810080 chr3L 2810165 2810240 26 159 7.5 8.0 7.8 3.0 235 chr3L 2810005 intron CG43444 - chr3L 2810122 intron CG43444 - chr3L 2810240 intron CG43444 - chr3L_26_2810001 chr3L_2810001 RAL-301_125b 2206 chr3L 2854442 2854468 chr3L 2854570 2854580 7 125 14.0 8.0 11.0 0.6 138 chr3L 2854442 intron CG43444 - chr3L 2854511 intron CG43444 - chr3L 2854580 intron CG43444 - chr3L_7_2850001 chr3L_2850001 RAL-301_125b 2207 chr3L 2854477 2854504 chr3L 2854569 2854626 12 109 7.5 8.0 7.8 1.4 149 chr3L 2854477 intron CG43444 - chr3L 2854552 intron CG43444 - chr3L 2854626 intron CG43444 - chr3L_12_2850001 chr3L_2850001 RAL-301_125b 2208 chr3L 2927792 2927803 chr3L 2936119 2936130 Tirant 5 8327 18.0 8.5 13.2 0.4 8338 chr3L 2927792 intron Shab + chr3L 2931961 intron Shab + chr3L 2936130 intron Shab + chr3L_5_2930001 chr3L_2930001 RAL-301_125b 2209 chr3L 2927810 2927864 chr3L 2936117 2936190 Tirant 15 8325 7.0 8.0 7.5 1.8 8380 chr3L 2927810 intron Shab + chr3L 2932000 intron Shab + chr3L 2936190 intron Shab + chr3L_15_2930001 chr3L_2930001 RAL-301_125b 2210 chr3L 2965967 2966035 chr3L 2966099 2966167 30 132 9.0 7.5 8.2 3.3 200 chr3L 2965967 intergenic not near genes chr3L 2966067 intergenic not near genes chr3L 2966167 intergenic not near genes chr3L_30_2965001 chr3L_2965001 RAL-301_125b 2211 chr3L 2966677 2966724 chr3L 2974154 2974204 mdg1 12 7479 9.5 3.5 6.5 1.6 7527 chr3L 2966677 intergenic not near genes chr3L 2970440 intergenic not near genes chr3L 2974204 intergenic not near genes chr3L_12_2970001 chr3L_2970001 RAL-301_125b 2212 chr3L 2987693 2987750 chr3L 2987992 2988062 20 306 7.0 5.5 6.2 2.8 369 chr3L 2987693 intergenic not near genes chr3L 2987878 intergenic not near genes chr3L 2988062 intergenic not near genes chr3L_20_2985001 chr3L_2985001 RAL-301_125b 2213 chr3L 3040283 3040351 chr3L 3042122 3042190 S-element 31 1839 9.0 15.5 12.2 2.3 1907 chr3L 3040283 3` UTR CG2162 + chr3L 3041236 intergenic not near genes chr3L 3042190 intergenic Jafrac2 + chr3L_31_3040001 chr3L_3040001 RAL-301_125b 2214 chr3L 3050858 3050925 chr3L 3050995 3051048 20 136 9.0 5.5 7.2 2.4 190 chr3L 3050858 intron CG32485 + chr3L 3050953 intron CG32485 + chr3L 3051048 exon CG32485 + chr3L_20_3050001 chr3L_3050001 RAL-301_125b 2215 chr3L 3051706 3051754 chr3L 3051987 3052049 pogo 18 293 16.0 15.5 15.8 1.1 343 chr3L 3051706 3` UTR CG32485 + chr3L 3051878 intergenic CG32485 + chr3L 3052049 intergenic CG32485 +,CG1271 + chr3L_18_3050001 chr3L_3050001 RAL-301_125b 2216 chr3L 3061261 3061281 chr3L 3069878 3069912 Tirant 6 8630 16.0 7.0 11.5 0.5 8651 chr3L 3061261 intron CG32486 - chr3L 3065586 intron CG32486 - chr3L 3069912 intron CG32486 - chr3L_6_3065001 chr3L_3065001 RAL-301_125b 2217 chr3L 3061284 3061317 chr3L 3069867 3069886 Tirant 13 8610 9.5 5.5 7.5 1.5 8602 chr3L 3061284 intron CG32486 - chr3L 3065585 intron CG32486 - chr3L 3069886 intron CG32486 - chr3L_13_3065001 chr3L_3065001 RAL-301_125b 2218 chr3L 3104813 3104874 chr3L 3104945 3105006 21 132 8.5 8.0 8.2 2.3 193 chr3L 3104813 intron Cht7 - chr3L 3104910 intron Cht7 - chr3L 3105006 intron Cht7 - chr3L_21_3100001 chr3L_3100001 RAL-301_125b 2219 chr3L 3128140 3128210 chr3L 3128276 3128346 13 135 1.5 5.0 3.2 3.1 206 chr3L 3128140 intergenic prominin-like - chr3L 3128243 intergenic not near genes chr3L 3128346 intergenic CG11537 - chr3L_13_3125001 chr3L_3125001 RAL-301_125b 2220 chr3L 3240387 3240431 chr3L 3240513 3240557 19 126 10.0 6.5 8.2 2.1 170 chr3L 3240387 intergenic not near genes chr3L 3240472 intergenic not near genes chr3L 3240557 intergenic not near genes chr3L_19_3240001 chr3L_3240001 RAL-301_125b 2221 chr3L 3259773 3259774 chr3L 3259922 3259923 4 149 19.5 9.5 14.5 0.3 150 chr3L 3259773 intron ckd + chr3L 3259848 intron ckd + chr3L 3259923 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-301_125b 2222 chr3L 3269056 3269092 chr3L 3269197 3269233 17 140 2.0 7.5 4.8 2.9 177 chr3L 3269056 intergenic CG34265 + chr3L 3269144 intergenic CG34265 + chr3L 3269233 intergenic CG34265 + chr3L_17_3265001 chr3L_3265001 RAL-301_125b 2223 chr3L 3281421 3281473 chr3L 3281945 3281963 Doc 21 535 10.0 8.5 9.2 2.1 542 chr3L 3281421 intron CG12017 + chr3L 3281692 intron CG12017 + chr3L 3281963 intron CG12017 + chr3L_21_3280001 chr3L_3280001 RAL-301_125b 2224 chr3L 3317511 3317562 chr3L 3317613 3317691 19 127 1.5 9.0 5.2 3.1 180 chr3L 3317511 intergenic Drsl5 + chr3L 3317601 intergenic PIG-C -,Drsl5 + chr3L 3317691 intergenic PIG-C - chr3L_19_3315001 chr3L_3315001 RAL-301_125b 2225 chr3L 3319173 3319231 chr3L 3319314 3319356 28 140 6.0 10.5 8.2 3.0 183 chr3L 3319173 exon PIG-C - chr3L 3319264 intergenic PIG-C -,CG12016 +,CG42456 + chr3L 3319356 intergenic PIG-C -,CG12016 +,CG42456 + chr3L_28_3315001 chr3L_3315001 RAL-301_125b 2226 chr3L 3449215 3449234 chr3L 3449343 3449362 14 128 13.5 7.5 10.5 1.2 147 chr3L 3449215 intron eIF5B - chr3L 3449288 intron eIF5B - chr3L 3449362 intron eIF5B - chr3L_14_3445001 chr3L_3445001 RAL-301_125b 2227 chr3L 3475041 3475058 chr3L 3475520 3475541 jockey 10 491 17.0 6.5 11.8 0.8 500 chr3L 3475041 intron CG42324 + chr3L 3475291 intron CG42324 + chr3L 3475541 intron CG42324 + chr3L_10_3475001 chr3L_3475001 RAL-301_125b 2228 chr3L 3475064 3475067 chr3L 3475517 3475561 jockey 4 482 16.0 5.0 10.5 0.3 497 chr3L 3475064 intron CG42324 + chr3L 3475312 intron CG42324 + chr3L 3475561 intron CG42324 + chr3L_4_3475001 chr3L_3475001 RAL-301_125b 2229 chr3L 3512909 3512980 chr3L 3513039 3513110 29 130 11.0 7.5 9.2 2.8 201 chr3L 3512909 intergenic ImpE2 - chr3L 3513010 intergenic ImpE2 - chr3L 3513110 intergenic ImpE2 - chr3L_29_3510001 chr3L_3510001 RAL-301_125b 2230 chr3L 3548670 3548716 chr3L 3548842 3548888 13 172 9.0 5.5 7.2 1.6 218 chr3L 3548670 intron Eip63E + chr3L 3548779 intron Eip63E + chr3L 3548888 intron Eip63E + chr3L_13_3545001 chr3L_3545001 RAL-301_125b 2231 chr3L 3577686 3577754 chr3L 3577814 3577882 38 128 13.5 8.0 10.8 3.2 196 chr3L 3577686 intron Eip63E + chr3L 3577784 intron Eip63E + chr3L 3577882 intron Eip63E + chr3L_38_3575001 chr3L_3575001 RAL-301_125b 2232 chr3L 3581698 3581761 chr3L 3581831 3581896 19 131 8.0 0.0 4.0 3.8 198 chr3L 3581698 intron Eip63E + chr3L 3581797 intron Eip63E + chr3L 3581896 intron Eip63E + chr3L_19_3580001 chr3L_3580001 RAL-301_125b 2233 chr3L 3601258 3601332 chr3L 3606619 3606678 copia 17 5357 7.5 9.0 8.2 1.8 5420 chr3L 3601258 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606678 intron Eip63E + chr3L_17_3600001 chr3L_3600001 RAL-301_125b 2234 chr3L 3619357 3619432 chr3L 3619501 3619576 31 144 10.5 12.0 11.2 2.5 219 chr3L 3619357 intergenic not near genes chr3L 3619466 intergenic not near genes chr3L 3619576 intergenic not near genes chr3L_31_3615001 chr3L_3615001 RAL-301_125b 2235 chr3L 3623458 3623532 chr3L 3623593 3623667 27 134 9.5 10.0 9.8 2.5 209 chr3L 3623458 intergenic not near genes chr3L 3623562 intergenic not near genes chr3L 3623667 intergenic not near genes chr3L_27_3620001 chr3L_3620001 RAL-301_125b 2236 chr3L 3627185 3627255 chr3L 3627340 3627410 31 155 12.0 7.5 9.8 2.9 225 chr3L 3627185 intron dar1 + chr3L 3627298 intron dar1 + chr3L 3627410 intron dar1 + chr3L_31_3625001 chr3L_3625001 RAL-301_125b 2237 chr3L 3695453 3695531 chr3L 3695581 3695660 26 129 6.0 6.0 6.0 3.7 207 chr3L 3695453 intergenic not near genes chr3L 3695556 intergenic not near genes chr3L 3695660 intergenic not near genes chr3L_26_3695001 chr3L_3695001 RAL-301_125b 2238 chr3L 3763707 3763725 chr3L 3763838 3763856 6 128 16.5 0.5 8.5 0.6 149 chr3L 3763707 intron CG32264 - chr3L 3763782 intron CG32264 - chr3L 3763856 intron CG32264 - chr3L_6_3760001 chr3L_3760001 RAL-301_125b 2239 chr3L 3766688 3766719 chr3L 3766824 3766855 14 136 17.5 0.0 8.8 1.4 167 chr3L 3766688 intron CG32264 - chr3L 3766772 intron CG32264 - chr3L 3766855 intron CG32264 - chr3L_14_3765001 chr3L_3765001 RAL-301_125b 2240 chr3L 3768912 3768980 chr3L 3769063 3769131 30 151 9.0 11.5 10.2 2.7 219 chr3L 3768912 intron CG32264 - chr3L 3769022 intron CG32264 - chr3L 3769131 exon CG32264 - chr3L_30_3765001 chr3L_3765001 RAL-301_125b 2241 chr3L 3783222 3783288 chr3L 3783349 3783415 18 126 8.5 7.5 8.0 2.0 193 chr3L 3783222 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783415 intron CG32264 - chr3L_18_3780001 chr3L_3780001 RAL-301_125b 2242 chr3L 3814839 3814867 chr3L 3814975 3815003 7 136 0.0 20.5 10.2 0.6 164 chr3L 3814839 intron,3` UTR Scsalpha +,CR43932 - chr3L 3814921 intron,intron Scsalpha +,CR43932 - chr3L 3815003 intron,3` UTR Scsalpha +,CR43932 - chr3L_7_3810001 chr3L_3810001 RAL-301_125b 2243 chr3L 3833689 3833770 chr3L 3833980 3834061 pogo 20 291 8.5 7.5 8.0 2.2 372 chr3L 3833689 intron enc + chr3L 3833875 intron enc + chr3L 3834061 intron enc + chr3L_20_3830001 chr3L_3830001 RAL-301_125b 2244 chr3L 3864804 3864828 chr3L 3864937 3864961 8 133 10.5 1.5 6.0 1.1 157 chr3L 3864804 intergenic CR45379 - chr3L 3864882 intergenic CR45379 - chr3L 3864961 intergenic not near genes chr3L_8_3860001 chr3L_3860001 RAL-301_125b 2245 chr3L 3877426 3877455 chr3L 3877604 3877633 17 178 5.5 12.0 8.8 1.7 207 chr3L 3877426 intergenic not near genes chr3L 3877530 intergenic not near genes chr3L 3877633 intergenic not near genes chr3L_17_3875001 chr3L_3875001 RAL-301_125b 2246 chr3L 3935805 3935844 chr3L 3935923 3935972 16 127 0.5 2.5 1.5 6.4 167 chr3L 3935805 5` UTR Eip63F-2 + chr3L 3935888 5` UTR Eip63F-2 + chr3L 3935972 5` UTR Eip63F-2 + chr3L_16_3935001 chr3L_3935001 RAL-301_125b 2247 chr3L 3967997 3968051 chr3L 3968126 3968180 15 129 7.5 0.0 3.8 3.1 183 chr3L 3967997 intergenic not near genes chr3L 3968088 intergenic not near genes chr3L 3968180 intergenic not near genes chr3L_15_3965001 chr3L_3965001 RAL-301_125b 2248 chr3L 4028744 4028814 chr3L 4028872 4028942 29 126 11.0 10.0 10.5 2.5 198 chr3L 4028744 intron,intron Gr64b +,Gr64c + chr3L 4028843 exon,5` UTR Gr64b +,Gr64c + chr3L 4028942 exon,5` UTR Gr64b +,Gr64c + chr3L_29_4025001 chr3L_4025001 RAL-301_125b 2249 chr3L 4146773 4146835 chr3L 4146900 4146967 17 131 0.0 6.5 3.2 4.0 194 chr3L 4146773 intergenic not near genes chr3L 4146870 intergenic not near genes chr3L 4146967 intergenic not near genes chr3L_17_4145001 chr3L_4145001 RAL-301_125b 2250 chr3L 4154207 4154220 chr3L 4154338 4154351 5 131 9.5 10.5 10.0 0.5 144 chr3L 4154207 exon nab - chr3L 4154279 intron nab - chr3L 4154351 intron nab - chr3L_5_4150001 chr3L_4150001 RAL-301_125b 2251 chr3L 4195101 4195118 chr3L 4195255 4195272 8 153 22.5 8.5 15.5 0.5 171 chr3L 4195101 exon CG43367 + chr3L 4195186 intron CG43367 + chr3L 4195272 intron CG43367 + chr3L_8_4195001 chr3L_4195001 RAL-301_125b 2252 chr3L 4195125 4195166 chr3L 4195242 4195305 22 147 10.5 6.0 8.2 2.4 180 chr3L 4195125 exon CG43367 + chr3L 4195215 intron CG43367 + chr3L 4195305 exon CG43367 + chr3L_22_4195001 chr3L_4195001 RAL-301_125b 2253 chr3L 4221629 4221700 chr3L 4222026 4222098 36 398 9.0 15.5 12.2 2.7 469 chr3L 4221629 intron CG43367 + chr3L 4221864 intron,3` UTR CG43367 +,CR32252 - chr3L 4222098 intron,3` UTR CG43367 +,CR32252 - chr3L_36_4220001 chr3L_4220001 RAL-301_125b 2254 chr3L 4328687 4328756 chr3L 4336235 4336304 412 22 7548 1.0 10.5 5.8 3.2 7617 chr3L 4328687 intron Cip4 - chr3L 4332496 intron Cip4 - chr3L 4336304 exon Cip4 - chr3L_22_4330001 chr3L_4330001 RAL-301_125b 2255 chr3L 4361015 4361023 chr3L 4362921 4362929 7 1906 0.0 7.0 3.5 1.6 1914 chr3L 4361015 intron Cip4 - chr3L 4361972 intron Cip4 - chr3L 4362929 intron Cip4 - chr3L_7_4360001 chr3L_4360001 RAL-301_125b 2256 chr3L 4364147 4364218 chr3L 4364286 4364357 15 139 6.5 3.0 4.8 2.6 210 chr3L 4364147 intergenic Cip4 -,mRpS6 + chr3L 4364252 intergenic Cip4 -,mRpS6 + chr3L 4364357 intergenic mRpS6 +,Cip4 - chr3L_15_4360001 chr3L_4360001 RAL-301_125b 2257 chr3L 4438698 4438745 chr3L 4438828 4438832 10 124 15.0 11.5 13.2 0.7 134 chr3L 4438698 intergenic CG15021 + chr3L 4438765 intergenic CG15021 + chr3L 4438832 intergenic not near genes chr3L_10_4435001 chr3L_4435001 RAL-301_125b 2258 chr3L 4464816 4464826 chr3L 4464945 4464955 4 129 4.5 8.5 6.5 0.5 139 chr3L 4464816 intergenic CG32241 - chr3L 4464886 intergenic CG32241 - chr3L 4464955 intergenic CG32241 - chr3L_4_4460001 chr3L_4460001 RAL-301_125b 2259 chr3L 4464834 4464881 chr3L 4464940 4465010 19 127 4.0 8.0 6.0 2.7 176 chr3L 4464834 intergenic CG32241 - chr3L 4464922 intergenic CG32241 - chr3L 4465010 intergenic CG32241 - chr3L_19_4460001 chr3L_4460001 RAL-301_125b 2260 chr3L 4503866 4503881 chr3L 4503993 4504008 14 127 18.5 0.0 9.2 1.4 142 chr3L 4503866 intron NT1 - chr3L 4503937 intron NT1 - chr3L 4504008 intron NT1 - chr3L_14_4500001 chr3L_4500001 RAL-301_125b 2261 chr3L 4519376 4519430 chr3L 4519503 4519530 17 121 7.0 0.0 3.5 3.8 154 chr3L 4519376 intron Tie - chr3L 4519453 intron Tie - chr3L 4519530 intron Tie - chr3L_17_4515001 chr3L_4515001 RAL-301_125b 2262 chr3L 4543309 4543354 chr3L 4543785 4543830 24 475 15.0 11.0 13.0 1.7 521 chr3L 4543309 intron CG11357 + chr3L 4543570 intron CG11357 + chr3L 4543830 intron CG11357 + chr3L_24_4540001 chr3L_4540001 RAL-301_125b 2263 chr3L 4547071 4547126 chr3L 4547372 4547441 20 313 10.5 5.0 7.8 2.3 370 chr3L 4547071 intron CG11357 + chr3L 4547256 intron CG11357 + chr3L 4547441 intron CG11357 + chr3L_20_4545001 chr3L_4545001 RAL-301_125b 2264 chr3L 4580262 4580321 chr3L 4580398 4580457 32 134 10.0 15.0 12.5 2.4 195 chr3L 4580262 intron CG42540 + chr3L 4580360 intron CG42540 + chr3L 4580457 intron CG42540 + chr3L_32_4580001 chr3L_4580001 RAL-301_125b 2265 chr3L 4607215 4607292 chr3L 4607356 4607433 31 141 4.5 8.0 6.2 4.3 218 chr3L 4607215 intron Src64B - chr3L 4607324 intron Src64B - chr3L 4607433 intron Src64B - chr3L_31_4605001 chr3L_4605001 RAL-301_125b 2266 chr3L 4614978 4615034 chr3L 4615111 4615182 26 144 6.0 9.5 7.8 3.0 204 chr3L 4614978 intron Src64B - chr3L 4615080 intron Src64B - chr3L 4615182 intron Src64B - chr3L_26_4615001 chr3L_4615001 RAL-301_125b 2267 chr3L 4685511 4685588 chr3L 4685935 4686015 31 425 7.0 5.5 6.2 4.3 504 chr3L 4685511 intron axo - chr3L 4685763 intron axo - chr3L 4686015 intron axo - chr3L_31_4685001 chr3L_4685001 RAL-301_125b 2268 chr3L 4700753 4700796 chr3L 4700897 4700940 15 144 8.5 0.0 4.2 2.9 187 chr3L 4700753 intron RhoGEF64C + chr3L 4700846 intron RhoGEF64C + chr3L 4700940 intron RhoGEF64C + chr3L_15_4700001 chr3L_4700001 RAL-301_125b 2269 chr3L 4744354 4744406 chr3L 4744484 4744501 9 126 12.0 1.5 6.8 1.2 147 chr3L 4744354 intron RhoGEF64C + chr3L 4744428 intron RhoGEF64C + chr3L 4744501 intron RhoGEF64C + chr3L_9_4740001 chr3L_4740001 RAL-301_125b 2270 chr3L 4769316 4769382 chr3L 4769443 4769510 17 129 3.0 8.0 5.5 2.6 194 chr3L 4769316 intron RhoGEF64C + chr3L 4769413 intron RhoGEF64C + chr3L 4769510 intron RhoGEF64C + chr3L_17_4765001 chr3L_4765001 RAL-301_125b 2271 chr3L 4853381 4853453 chr3L 4853522 4853593 32 140 5.0 10.0 7.5 3.8 212 chr3L 4853381 intergenic not near genes chr3L 4853487 intergenic not near genes chr3L 4853593 intergenic not near genes chr3L_32_4850001 chr3L_4850001 RAL-301_125b 2272 chr3L 4858260 4858332 chr3L 4858400 4858472 27 138 12.0 8.0 10.0 2.5 212 chr3L 4858260 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858472 intergenic not near genes chr3L_27_4855001 chr3L_4855001 RAL-301_125b 2273 chr3L 4899441 4899504 chr3L 4899642 4899705 30 200 7.0 11.5 9.2 2.9 264 chr3L 4899441 intron CG13704 + chr3L 4899573 intron CG13704 + chr3L 4899705 intron CG13704 + chr3L_30_4895001 chr3L_4895001 RAL-301_125b 2274 chr3L 4901089 4901138 chr3L 4907329 4907378 diver 16 6239 11.5 9.0 10.2 1.4 6289 chr3L 4901089 intergenic CG13704 + chr3L 4904234 intergenic not near genes chr3L 4907378 intergenic not near genes chr3L_16_4900001 chr3L_4900001 RAL-301_125b 2275 chr3L 5020658 5020663 chr3L 5020787 5020792 4 129 0.0 6.0 3.0 1.0 134 chr3L 5020658 intron Con - chr3L 5020725 intron Con - chr3L 5020792 intron Con - chr3L_4_5020001 chr3L_5020001 RAL-301_125b 2276 chr3L 5034141 5034180 chr3L 5043343 5043382 roo 10 9202 12.0 14.0 13.0 0.7 9241 chr3L 5034141 intron Con - chr3L 5038762 intron Con - chr3L 5043382 intron Con - chr3L_10_5035001 chr3L_5035001 RAL-301_125b 2277 chr3L 5045410 5045479 chr3L 5050241 5050310 Doc 11 4831 6.5 6.5 6.5 1.5 4900 chr3L 5045410 5` UTR Con - chr3L 5047860 intron Con - chr3L 5050310 intron Con - chr3L_11_5045001 chr3L_5045001 RAL-301_125b 2278 chr3L 5066236 5066242 chr3L 5066396 5066404 6 160 9.5 14.0 11.8 0.5 168 chr3L 5066236 intron Con - chr3L 5066320 intron Con - chr3L 5066404 intron Con - chr3L_6_5065001 chr3L_5065001 RAL-301_125b 2279 chr3L 5066245 5066252 chr3L 5066395 5066412 6 157 8.5 13.0 10.8 0.5 167 chr3L 5066245 intron Con - chr3L 5066328 intron Con - chr3L 5066412 intron Con - chr3L_6_5065001 chr3L_5065001 RAL-301_125b 2280 chr3L 5103561 5103584 chr3L 5103691 5103714 11 129 20.5 0.0 10.2 1.0 153 chr3L 5103561 intergenic not near genes chr3L 5103638 intergenic not near genes chr3L 5103714 intergenic not near genes chr3L_11_5100001 chr3L_5100001 RAL-301_125b 2281 chr3L 5104436 5104499 chr3L 5124620 5124682 32 20184 11.5 9.5 10.5 2.8 20246 chr3L 5104436 intergenic not near genes chr3L 5114559 intergenic not near genes chr3L 5124682 intergenic not near genes chr3L_32_5110001 chr3L_5110001 RAL-301_125b 2282 chr3L 5188758 5188788 chr3L 5189559 5189589 9 801 16.0 7.0 11.5 0.7 831 chr3L 5188758 intron shep - chr3L 5189174 intron shep - chr3L 5189589 intron shep - chr3L_9_5185001 chr3L_5185001 RAL-301_125b 2283 chr3L 5188791 5188817 chr3L 5189592 5189611 11 800 7.0 11.5 9.2 1.1 820 chr3L 5188791 intron shep - chr3L 5189201 intron shep - chr3L 5189611 intron shep - chr3L_11_5185001 chr3L_5185001 RAL-301_125b 2284 chr3L 5203068 5203113 chr3L 5203223 5203268 24 155 9.5 10.0 9.8 2.2 200 chr3L 5203068 intron shep - chr3L 5203168 intron shep - chr3L 5203268 intron shep - chr3L_24_5200001 chr3L_5200001 RAL-301_125b 2285 chr3L 5225015 5225100 chr3L 5225177 5225251 8 156 0.0 0.0 0.0 8.0 236 chr3L 5225015 intron shep - chr3L 5225133 intron shep - chr3L 5225251 intron shep - chr3L_8_5225001 chr3L_5225001 RAL-301_125b 2286 chr3L 5251809 5251864 chr3L 5251938 5251993 15 129 0.0 14.5 7.2 1.8 184 chr3L 5251809 intron shep - chr3L 5251901 intron shep - chr3L 5251993 intron shep - chr3L_15_5250001 chr3L_5250001 RAL-301_125b 2287 chr3L 5261116 5261176 chr3L 5261244 5261304 20 127 9.5 10.0 9.8 1.9 188 chr3L 5261116 intron shep - chr3L 5261210 intron shep - chr3L 5261304 intron shep - chr3L_20_5260001 chr3L_5260001 RAL-301_125b 2288 chr3L 5265311 5265373 chr3L 5265453 5265520 17 147 8.5 7.5 8.0 1.9 209 chr3L 5265311 intron shep - chr3L 5265416 intron shep - chr3L 5265520 intron shep - chr3L_17_5265001 chr3L_5265001 RAL-301_125b 2289 chr3L 5271131 5271192 chr3L 5271264 5271320 13 126 0.0 8.0 4.0 2.6 189 chr3L 5271131 intron shep - chr3L 5271226 intron shep - chr3L 5271320 intron shep - chr3L_13_5270001 chr3L_5270001 RAL-301_125b 2290 chr3L 5299124 5299141 chr3L 5306600 5306617 Quasimodo 7 7476 15.0 0.0 7.5 0.8 7493 chr3L 5299124 intergenic not near genes chr3L 5302870 intergenic not near genes chr3L 5306617 intergenic not near genes chr3L_7_5300001 chr3L_5300001 RAL-301_125b 2291 chr3L 5306663 5306682 chr3L 5306802 5306821 7 139 0.0 0.5 0.2 5.8 158 chr3L 5306663 intergenic not near genes chr3L 5306742 intergenic not near genes chr3L 5306821 intergenic not near genes chr3L_7_5305001 chr3L_5305001 RAL-301_125b 2292 chr3L 5310305 5310382 chr3L 5310484 5310559 17 178 5.5 7.0 6.2 2.4 254 chr3L 5310305 intergenic not near genes chr3L 5310432 intergenic not near genes chr3L 5310559 intergenic not near genes chr3L_17_5310001 chr3L_5310001 RAL-301_125b 2293 chr3L 5316909 5316942 chr3L 5317044 5317062 15 132 17.5 9.5 13.5 1.0 153 chr3L 5316909 intergenic CR45741 - chr3L 5316986 intergenic not near genes chr3L 5317062 intergenic not near genes chr3L_15_5315001 chr3L_5315001 RAL-301_125b 2294 chr3L 5316944 5316968 chr3L 5317038 5317103 10 118 11.5 7.0 9.2 1.0 159 chr3L 5316944 intergenic CR45741 - chr3L 5317024 intergenic not near genes chr3L 5317103 intergenic not near genes chr3L_10_5315001 chr3L_5315001 RAL-301_125b 2295 chr3L 5327326 5327405 chr3L 5327468 5327547 22 142 7.5 0.0 3.8 4.6 221 chr3L 5327326 intergenic not near genes chr3L 5327436 intergenic not near genes chr3L 5327547 intergenic not near genes chr3L_22_5325001 chr3L_5325001 RAL-301_125b 2296 chr3L 5375989 5376044 chr3L 5376118 5376172 29 129 5.0 2.0 3.5 6.4 183 chr3L 5375989 intergenic not near genes chr3L 5376080 intergenic not near genes chr3L 5376172 intergenic not near genes chr3L_29_5375001 chr3L_5375001 RAL-301_125b 2297 chr3L 5396428 5396444 chr3L 5396564 5396580 10 136 0.0 0.0 0.0 10.0 152 chr3L 5396428 intergenic not near genes chr3L 5396504 intergenic not near genes chr3L 5396580 intergenic not near genes chr3L_10_5395001 chr3L_5395001 RAL-301_125b 2298 chr3L 5403947 5404025 chr3L 5404076 5404154 34 128 7.5 5.5 6.5 4.5 207 chr3L 5403947 intergenic not near genes chr3L 5404050 intergenic not near genes chr3L 5404154 intergenic not near genes chr3L_34_5400001 chr3L_5400001 RAL-301_125b 2299 chr3L 5409686 5409691 chr3L 5409947 5409952 4 261 0.5 9.0 4.8 0.7 266 chr3L 5409686 intergenic not near genes chr3L 5409819 intergenic not near genes chr3L 5409952 intergenic not near genes chr3L_4_5405001 chr3L_5405001 RAL-301_125b 2300 chr3L 5409698 5409701 chr3L 5409942 5409962 4 256 0.5 7.0 3.8 0.8 264 chr3L 5409698 intergenic not near genes chr3L 5409830 intergenic not near genes chr3L 5409962 intergenic not near genes chr3L_4_5405001 chr3L_5405001 RAL-301_125b 2301 chr3L 5428661 5428727 chr3L 5428789 5428869 4 135 0.0 0.0 0.0 4.0 208 chr3L 5428661 intron CG34391 + chr3L 5428765 intron CG34391 + chr3L 5428869 intron CG34391 + chr3L_4_5425001 chr3L_5425001 RAL-301_125b 2302 chr3L 5449487 5449562 chr3L 5449616 5449691 29 128 7.0 5.0 6.0 4.1 204 chr3L 5449487 intergenic not near genes chr3L 5449589 intergenic not near genes chr3L 5449691 intergenic not near genes chr3L_29_5445001 chr3L_5445001 RAL-301_125b 2303 chr3L 5458078 5458092 chr3L 5466716 5466732 Max-element 6 8647 0.5 16.0 8.2 0.7 8654 chr3L 5458078 intergenic not near genes chr3L 5462405 intergenic not near genes chr3L 5466732 intergenic not near genes chr3L_6_5460001 chr3L_5460001 RAL-301_125b 2304 chr3L 5472161 5472199 chr3L 5472291 5472329 17 129 8.5 9.5 9.0 1.7 168 chr3L 5472161 intergenic not near genes chr3L 5472245 intergenic not near genes chr3L 5472329 intergenic not near genes chr3L_17_5470001 chr3L_5470001 RAL-301_125b 2305 chr3L 5485466 5485538 chr3L 5485625 5485696 24 159 7.5 8.0 7.8 2.7 230 chr3L 5485466 intergenic not near genes chr3L 5485581 intergenic not near genes chr3L 5485696 intergenic not near genes chr3L_24_5485001 chr3L_5485001 RAL-301_125b 2306 chr3L 5504509 5504554 chr3L 5504637 5504682 14 127 13.5 5.5 9.5 1.3 173 chr3L 5504509 intron CG34342 - chr3L 5504596 intron CG34342 - chr3L 5504682 intron CG34342 - chr3L_14_5500001 chr3L_5500001 RAL-301_125b 2307 chr3L 5514696 5514767 chr3L 5514823 5514894 37 127 10.5 11.0 10.8 3.1 198 chr3L 5514696 intron Lkr - chr3L 5514795 intron Lkr - chr3L 5514894 intron Lkr - chr3L_37_5510001 chr3L_5510001 RAL-301_125b 2308 chr3L 5537678 5537744 chr3L 5538070 5538136 jockey 17 392 5.0 8.0 6.5 2.3 458 chr3L 5537678 intergenic not near genes chr3L 5537907 intergenic not near genes chr3L 5538136 intergenic CG10625 - chr3L_17_5535001 chr3L_5535001 RAL-301_125b 2309 chr3L 5597785 5597830 chr3L 5597915 5597960 17 129 11.0 0.5 5.8 2.5 175 chr3L 5597785 intergenic CG5150 + chr3L 5597872 intergenic CG5150 + chr3L 5597960 intergenic not near genes chr3L_17_5595001 chr3L_5595001 RAL-301_125b 2310 chr3L 5613443 5613516 chr3L 5613620 5613693 30 176 0.0 7.0 3.5 6.7 250 chr3L 5613443 intergenic not near genes chr3L 5613568 intergenic not near genes chr3L 5613693 intergenic not near genes chr3L_30_5610001 chr3L_5610001 RAL-301_125b 2311 chr3L 5615007 5615078 chr3L 5615151 5615222 33 142 6.0 5.5 5.8 4.9 215 chr3L 5615007 intergenic not near genes chr3L 5615114 intergenic not near genes chr3L 5615222 intergenic not near genes chr3L_33_5615001 chr3L_5615001 RAL-301_125b 2312 chr3L 5666269 5666319 chr3L 5666403 5666453 8 134 0.0 14.0 7.0 1.0 184 chr3L 5666269 intron sif + chr3L 5666361 intron sif + chr3L 5666453 intron sif + chr3L_8_5665001 chr3L_5665001 RAL-301_125b 2313 chr3L 5677148 5677202 chr3L 5677274 5677328 20 124 3.5 14.5 9.0 2.0 180 chr3L 5677148 intron sif + chr3L 5677238 intron sif + chr3L 5677328 intron sif + chr3L_20_5675001 chr3L_5675001 RAL-301_125b 2314 chr3L 5747410 5747472 chr3L 5747545 5747607 33 135 11.0 10.0 10.5 2.9 197 chr3L 5747410 3` UTR sif + chr3L 5747508 3` UTR sif + chr3L 5747607 3` UTR sif + chr3L_33_5745001 chr3L_5745001 RAL-301_125b 2315 chr3L 5788652 5788730 chr3L 5788828 5788906 28 174 8.0 7.0 7.5 3.3 254 chr3L 5788652 intergenic not near genes chr3L 5788779 intergenic not near genes chr3L 5788906 intergenic not near genes chr3L_28_5785001 chr3L_5785001 RAL-301_125b 2316 chr3L 5908048 5908105 chr3L 5908178 5908235 16 130 0.0 14.0 7.0 2.0 187 chr3L 5908048 intron CG13288 + chr3L 5908142 intron CG13288 + chr3L 5908235 intron CG13288 + chr3L_16_5905001 chr3L_5905001 RAL-301_125b 2317 chr3L 5909992 5910048 chr3L 5910283 5910339 pogo 24 291 18.0 9.0 13.5 1.7 347 chr3L 5909992 intron CG13288 + chr3L 5910166 intron CG13288 + chr3L 5910339 intron CG13288 + chr3L_24_5910001 chr3L_5910001 RAL-301_125b 2318 chr3L 5910050 5910060 chr3L 5910276 5910350 pogo 7 282 13.0 9.0 11.0 0.6 300 chr3L 5910050 intron CG13288 + chr3L 5910200 intron CG13288 + chr3L 5910350 intron CG13288 + chr3L_7_5910001 chr3L_5910001 RAL-301_125b 2319 chr3L 5926274 5926345 chr3L 5926507 5926587 BS 31 237 11.0 9.0 10.0 2.8 313 chr3L 5926274 intron Vap-33B + chr3L 5926430 intron Vap-33B + chr3L 5926587 intron Vap-33B + chr3L_31_5925001 chr3L_5925001 RAL-301_125b 2320 chr3L 5992573 5992621 chr3L 5992725 5992773 20 152 7.0 11.0 9.0 2.0 200 chr3L 5992573 intergenic not near genes chr3L 5992673 intergenic not near genes chr3L 5992773 intergenic not near genes chr3L_20_5990001 chr3L_5990001 RAL-301_125b 2321 chr3L 6001632 6001717 chr3L 6004382 6004467 jockey 29 2750 6.5 0.0 3.2 6.9 2835 chr3L 6001632 intron PVRAP + chr3L 6003050 intron PVRAP + chr3L 6004467 intron PVRAP + chr3L_29_6000001 chr3L_6000001 RAL-301_125b 2322 chr3L 6049239 6049315 chr3L 6049394 6049466 33 153 66.0 70.0 68.0 0.5 227 chr3L 6049239 intergenic not near genes chr3L 6049352 intergenic not near genes chr3L 6049466 intergenic not near genes chr3L_33_6045001 chr3L_6045001 RAL-301_125b 2323 chr3L 6052614 6052645 chr3L 6052749 6052749 14 129 19.0 14.5 16.8 0.8 135 chr3L 6052614 exon Jon65Aii + chr3L 6052682 intron Jon65Aii + chr3L 6052749 exon Jon65Aii + chr3L_14_6050001 chr3L_6050001 RAL-301_125b 2324 chr3L 6052646 6052665 chr3L 6052740 6052759 6 108 14.5 13.0 13.8 0.4 113 chr3L 6052646 exon Jon65Aii + chr3L 6052702 intron Jon65Aii + chr3L 6052759 exon Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-301_125b 2325 chr3L 6064971 6065039 chr3L 6065093 6065166 21 126 5.5 6.5 6.0 3.0 195 chr3L 6064971 intergenic not near genes chr3L 6065068 intergenic not near genes chr3L 6065166 intergenic not near genes chr3L_21_6065001 chr3L_6065001 RAL-301_125b 2326 chr3L 6071711 6071744 chr3L 6071843 6071889 8 135 3.0 0.0 1.5 3.2 178 chr3L 6071711 intergenic CG42269 +,CG6602 + chr3L 6071800 intergenic CG42269 +,CG6602 + chr3L 6071889 intergenic CG6602 +,CG42269 + chr3L_8_6070001 chr3L_6070001 RAL-301_125b 2327 chr3L 6119091 6119126 chr3L 6119218 6119253 8 127 15.0 0.0 7.5 0.9 162 chr3L 6119091 exon Ets65A + chr3L 6119172 intron Ets65A + chr3L 6119253 intron Ets65A + chr3L_8_6115001 chr3L_6115001 RAL-301_125b 2328 chr3L 6155653 6155713 chr3L 6155789 6155849 26 136 10.0 10.0 10.0 2.4 196 chr3L 6155653 intergenic CR45421 - chr3L 6155751 intergenic not near genes chr3L 6155849 intergenic not near genes chr3L_26_6155001 chr3L_6155001 RAL-301_125b 2329 chr3L 6220873 6220936 chr3L 6230075 6230138 roo 25 9201 11.0 9.5 10.2 2.2 9265 chr3L 6220873 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230138 intergenic not near genes chr3L_25_6225001 chr3L_6225001 RAL-301_125b 2330 chr3L 6259344 6259399 chr3L 6261199 6261254 22 1854 41.0 44.0 42.5 0.5 1910 chr3L 6259344 3` UTR ImpL3 - chr3L 6260299 exon ImpL3 - chr3L 6261254 intron ImpL3 - chr3L_22_6260001 chr3L_6260001 RAL-301_125b 2331 chr3L 6259257 6259286 chr3L 6261252 6261327 37 2010 50.5 46.0 48.2 0.8 2070 chr3L 6259257 3` UTR ImpL3 - chr3L 6260292 exon ImpL3 - chr3L 6261327 intron ImpL3 - chr3L_37_6260001 chr3L_6260001 RAL-301_125b 2332 chr3L 6278164 6278236 chr3L 6278290 6278343 9 124 9.0 0.0 4.5 1.6 179 chr3L 6278164 intergenic not near genes chr3L 6278254 intergenic not near genes chr3L 6278343 intergenic not near genes chr3L_9_6275001 chr3L_6275001 RAL-301_125b 2333 chr3L 6332237 6332262 chr3L 6332374 6332399 6 137 3.5 0.0 1.8 2.1 162 chr3L 6332237 intron CG13300 - chr3L 6332318 intron CG13300 - chr3L 6332399 intron CG13300 - chr3L_6_6330001 chr3L_6330001 RAL-301_125b 2334 chr3L 6334966 6335034 chr3L 6335487 6335555 297 35 519 8.5 11.0 9.8 3.2 589 chr3L 6334966 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335555 intron CG13300 - chr3L_35_6335001 chr3L_6335001 RAL-301_125b 2335 chr3L 6362338 6362410 chr3L 6362465 6362537 22 127 6.5 7.5 7.0 2.8 199 chr3L 6362338 intergenic not near genes chr3L 6362438 intergenic not near genes chr3L 6362537 intergenic not near genes chr3L_22_6360001 chr3L_6360001 RAL-301_125b 2336 chr3L 6369716 6369767 chr3L 6369870 6369921 13 154 10.0 0.0 5.0 2.2 205 chr3L 6369716 intergenic CR45419 - chr3L 6369818 intergenic CR45419 - chr3L 6369921 intergenic CR45419 - chr3L_13_6365001 chr3L_6365001 RAL-301_125b 2337 chr3L 6371397 6371455 chr3L 6371526 6371587 14 127 7.5 6.5 7.0 1.8 190 chr3L 6371397 intergenic not near genes chr3L 6371492 intergenic not near genes chr3L 6371587 intergenic not near genes chr3L_14_6370001 chr3L_6370001 RAL-301_125b 2338 chr3L 6405619 6405679 chr3L 6432133 6432193 roo 23 26514 8.0 13.5 10.8 1.9 26574 chr3L 6405619 intron CG42747 + chr3L 6418906 intron CG42747 + chr3L 6432193 intron CG42747 + chr3L_23_6415001 chr3L_6415001 RAL-301_125b 2339 chr3L 6456304 6456316 chr3L 6456438 6456450 5 134 5.5 15.5 10.5 0.4 146 chr3L 6456304 intron CG42747 + chr3L 6456377 intron CG42747 + chr3L 6456450 intron CG42747 + chr3L_5_6455001 chr3L_6455001 RAL-301_125b 2340 chr3L 6512219 6512292 chr3L 6512355 6512400 22 125 10.0 5.5 7.8 2.5 181 chr3L 6512219 intron sfl + chr3L 6512310 intron sfl + chr3L 6512400 intron sfl + chr3L_22_6510001 chr3L_6510001 RAL-301_125b 2341 chr3L 6620481 6620534 chr3L 6621055 6621108 Rt1c 21 573 7.0 10.0 8.5 2.2 627 chr3L 6620481 intergenic not near genes chr3L 6620794 intergenic not near genes chr3L 6621108 intergenic not near genes chr3L_21_6620001 chr3L_6620001 RAL-301_125b 2342 chr3L 6723657 6723669 chr3L 6723804 6723816 6 147 24.0 4.5 14.2 0.4 159 chr3L 6723657 intergenic not near genes chr3L 6723736 intergenic not near genes chr3L 6723816 intergenic not near genes chr3L_6_6720001 chr3L_6720001 RAL-301_125b 2343 chr3L 6723670 6723729 chr3L 6723803 6723876 27 144 7.5 4.5 6.0 3.9 206 chr3L 6723670 intergenic not near genes chr3L 6723773 intergenic not near genes chr3L 6723876 intergenic not near genes chr3L_27_6720001 chr3L_6720001 RAL-301_125b 2344 chr3L 6726796 6726824 chr3L 6726922 6726950 11 126 0.0 6.0 3.0 2.8 154 chr3L 6726796 intergenic not near genes chr3L 6726873 intergenic not near genes chr3L 6726950 intergenic not near genes chr3L_11_6725001 chr3L_6725001 RAL-301_125b 2345 chr3L 6778497 6778534 chr3L 6778636 6778677 8 142 0.0 6.0 3.0 2.0 180 chr3L 6778497 intergenic not near genes chr3L 6778587 intergenic not near genes chr3L 6778677 intergenic not near genes chr3L_8_6775001 chr3L_6775001 RAL-301_125b 2346 chr3L 6781075 6781151 chr3L 6783138 6783211 Doc 27 2060 9.5 0.0 4.8 4.7 2136 chr3L 6781075 intergenic not near genes chr3L 6782143 intergenic not near genes chr3L 6783211 intergenic not near genes chr3L_27_6780001 chr3L_6780001 RAL-301_125b 2347 chr3L 6820593 6820632 chr3L 6820727 6820750 20 133 20.5 20.5 20.5 0.9 157 chr3L 6820593 intergenic not near genes chr3L 6820672 intergenic not near genes chr3L 6820750 intergenic not near genes chr3L_20_6820001 chr3L_6820001 RAL-301_125b 2348 chr3L 6835881 6835924 chr3L 6836009 6836052 17 128 8.0 12.5 10.2 1.5 171 chr3L 6835881 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836052 intergenic not near genes chr3L_17_6835001 chr3L_6835001 RAL-301_125b 2349 chr3L 6855885 6855955 chr3L 6860719 6860743 Doc 26 4828 9.0 7.5 8.2 2.8 4858 chr3L 6855885 intergenic not near genes chr3L 6858314 intergenic not near genes chr3L 6860743 intergenic not near genes chr3L_26_6855001 chr3L_6855001 RAL-301_125b 2350 chr3L 6868669 6868737 chr3L 6868797 6868865 26 128 0.0 8.5 4.2 5.0 196 chr3L 6868669 intergenic not near genes chr3L 6868767 intergenic not near genes chr3L 6868865 intergenic not near genes chr3L_26_6865001 chr3L_6865001 RAL-301_125b 2351 chr3L 6875204 6875216 chr3L 6875331 6875343 8 127 13.5 3.5 8.5 0.8 139 chr3L 6875204 intergenic not near genes chr3L 6875274 intergenic not near genes chr3L 6875343 intergenic not near genes chr3L_8_6875001 chr3L_6875001 RAL-301_125b 2352 chr3L 6887476 6887536 chr3L 6895018 6895078 roo 31 7542 8.0 20.0 14.0 2.1 7602 chr3L 6887476 intergenic not near genes chr3L 6891277 intergenic not near genes chr3L 6895078 intergenic not near genes chr3L_31_6890001 chr3L_6890001 RAL-301_125b 2353 chr3L 6915775 6915835 chr3L 6916106 6916166 19 331 1.0 7.0 4.0 3.8 391 chr3L 6915775 intergenic not near genes chr3L 6915970 intergenic not near genes chr3L 6916166 intergenic not near genes chr3L_19_6915001 chr3L_6915001 RAL-301_125b 2354 chr3L 6934305 6934312 chr3L 6934466 6934473 4 161 23.0 11.5 17.2 0.2 168 chr3L 6934305 exon CG14820 + chr3L 6934389 intron CG14820 + chr3L 6934473 intron CG14820 + chr3L_4_6930001 chr3L_6930001 RAL-301_125b 2355 chr3L 6934314 6934358 chr3L 6934475 6934519 13 161 12.5 13.0 12.8 0.9 205 chr3L 6934314 exon CG14820 + chr3L 6934416 intron CG14820 + chr3L 6934519 exon CG14820 + chr3L_13_6930001 chr3L_6930001 RAL-301_125b 2356 chr3L 6958992 6959007 chr3L 6963521 6963536 4 4529 55.5 65.5 60.5 0.1 4544 chr3L 6958992 exon Surf1 + chr3L 6961264 exon sgl - chr3L 6963536 intron sgl - chr3L_4_6960001 chr3L_6960001 RAL-301_125b 2357 chr3L 6958979 6959024 chr3L 6963541 6963554 15 4535 61.0 64.5 62.8 0.2 4575 chr3L 6958979 exon Surf1 + chr3L 6961266 exon sgl - chr3L 6963554 intron sgl - chr3L_15_6960001 chr3L_6960001 RAL-301_125b 2358 chr3L 6958977 6959051 chr3L 6963557 6963580 13 4540 65.0 58.0 61.5 0.2 4603 chr3L 6958977 exon Surf1 + chr3L 6961278 exon sgl - chr3L 6963580 intron sgl - chr3L_13_6960001 chr3L_6960001 RAL-301_125b 2359 chr3L 6974441 6974516 chr3L 6974592 6974667 18 151 8.5 7.5 8.0 2.0 226 chr3L 6974441 exon Galphai - chr3L 6974554 intron Galphai - chr3L 6974667 intron Galphai - chr3L_18_6970001 chr3L_6970001 RAL-301_125b 2360 chr3L 6994846 6994899 chr3L 6995497 6995549 BS 12 658 1.0 11.0 6.0 1.7 703 chr3L 6994846 intergenic bin + chr3L 6995198 intergenic not near genes chr3L 6995549 intergenic not near genes chr3L_12_6995001 chr3L_6995001 RAL-301_125b 2361 chr3L 7001938 7001970 chr3L 7002109 7002141 8 171 11.0 7.5 9.2 0.8 203 chr3L 7001938 intron Mp + chr3L 7002040 intron Mp + chr3L 7002141 intron Mp + chr3L_8_7000001 chr3L_7000001 RAL-301_125b 2362 chr3L 7022011 7022048 chr3L 7022262 7022302 14 257 0.0 12.0 6.0 2.0 291 chr3L 7022011 intron Mp + chr3L 7022156 intron Mp + chr3L 7022302 intron Mp + chr3L_14_7020001 chr3L_7020001 RAL-301_125b 2363 chr3L 7029549 7029625 chr3L 7030126 7030202 32 576 6.0 5.5 5.8 4.7 653 chr3L 7029549 intron Mp + chr3L 7029876 intron Mp + chr3L 7030202 intron Mp + chr3L_32_7025001 chr3L_7025001 RAL-301_125b 2364 chr3L 7067105 7067167 chr3L 7067338 7067400 27 233 8.0 7.0 7.5 3.2 295 chr3L 7067105 intron,intron CG8641 -,CG14823 + chr3L 7067252 intron,intron CG8641 -,CG14823 + chr3L 7067400 intron,intron CG8641 -,CG14823 + chr3L_27_7065001 chr3L_7065001 RAL-301_125b 2365 chr3L 7086795 7086855 chr3L 7086919 7086985 21 129 10.0 0.0 5.0 3.5 190 chr3L 7086795 intergenic Cpr65Ea - chr3L 7086890 intergenic Cpr65Ea - chr3L 7086985 intergenic Cpr65Ea - chr3L_21_7085001 chr3L_7085001 RAL-301_125b 2366 chr3L 7089980 7090051 chr3L 7090111 7090182 27 131 11.5 8.5 10.0 2.5 202 chr3L 7089980 intergenic not near genes chr3L 7090081 intergenic not near genes chr3L 7090182 intergenic not near genes chr3L_27_7090001 chr3L_7090001 RAL-301_125b 2367 chr3L 7100398 7100451 chr3L 7100524 7100588 24 136 15.5 13.0 14.2 1.6 190 chr3L 7100398 intron form3 + chr3L 7100493 intron form3 + chr3L 7100588 intron form3 + chr3L_24_7100001 chr3L_7100001 RAL-301_125b 2368 chr3L 7107297 7107327 chr3L 7107430 7107463 6 134 0.0 9.0 4.5 1.1 166 chr3L 7107297 intron form3 + chr3L 7107380 intron form3 + chr3L 7107463 intron form3 + chr3L_6_7105001 chr3L_7105001 RAL-301_125b 2369 chr3L 7112538 7112597 chr3L 7112674 7112734 17 136 2.0 5.5 3.8 3.5 196 chr3L 7112538 intron form3 + chr3L 7112636 intron form3 + chr3L 7112734 intron form3 + chr3L_17_7110001 chr3L_7110001 RAL-301_125b 2370 chr3L 7150869 7150895 chr3L 7150995 7151021 12 126 10.0 5.5 7.8 1.4 152 chr3L 7150869 intron corn - chr3L 7150945 intron corn - chr3L 7151021 intron corn - chr3L_12_7150001 chr3L_7150001 RAL-301_125b 2371 chr3L 7187382 7187421 chr3L 7187514 7187553 19 132 0.0 17.5 8.8 1.9 171 chr3L 7187382 intron Dscam2 - chr3L 7187468 intron Dscam2 - chr3L 7187553 intron Dscam2 - chr3L_19_7185001 chr3L_7185001 RAL-301_125b 2372 chr3L 7198580 7198653 chr3L 7198730 7198776 22 145 4.5 6.0 5.2 3.5 196 chr3L 7198580 intergenic not near genes chr3L 7198678 intergenic not near genes chr3L 7198776 intergenic not near genes chr3L_22_7195001 chr3L_7195001 RAL-301_125b 2373 chr3L 7258879 7258929 chr3L 7259069 7259119 12 190 7.0 7.0 7.0 1.5 240 chr3L 7258879 intron CG14830 - chr3L 7258999 intron CG14830 - chr3L 7259119 intron CG14830 - chr3L_12_7255001 chr3L_7255001 RAL-301_125b 2374 chr3L 7264824 7264894 chr3L 7264970 7265027 16 135 0.0 10.0 5.0 2.7 203 chr3L 7264824 intergenic not near genes chr3L 7264926 intergenic not near genes chr3L 7265027 intergenic not near genes chr3L_16_7260001 chr3L_7260001 RAL-301_125b 2375 chr3L 7285404 7285459 chr3L 7285532 7285587 28 128 3.0 4.5 3.8 5.8 183 chr3L 7285404 intron unc-13-4A - chr3L 7285496 intron unc-13-4A - chr3L 7285587 intron unc-13-4A - chr3L_28_7285001 chr3L_7285001 RAL-301_125b 2376 chr3L 7358249 7358275 chr3L 7359583 7359609 8 1334 71.0 42.0 56.5 0.1 1360 chr3L 7358249 exon pst - chr3L 7358929 exon pst - chr3L 7359609 intron pst - chr3L_8_7355001 chr3L_7355001 RAL-301_125b 2377 chr3L 7358277 7358324 chr3L 7359581 7359636 21 1328 65.0 41.0 53.0 0.4 1359 chr3L 7358277 exon pst - chr3L 7358956 exon pst - chr3L 7359636 intron pst - chr3L_21_7355001 chr3L_7355001 RAL-301_125b 2378 chr3L 7357181 7357213 chr3L 7360251 7360283 13 3070 67.5 59.5 63.5 0.2 3102 chr3L 7357181 intergenic pst -,CTCF - chr3L 7358732 exon pst - chr3L 7360283 intergenic pst -,Sec63 + chr3L_13_7355001 chr3L_7355001 RAL-301_125b 2379 chr3L 7377269 7377344 chr3L 7380424 7380494 297 36 3154 11.0 12.0 11.5 2.9 3225 chr3L 7377269 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380494 intron SMSr - chr3L_36_7375001 chr3L_7375001 RAL-301_125b 2380 chr3L 7388213 7388259 chr3L 7388385 7388441 4 174 7.0 0.5 3.8 0.8 228 chr3L 7388213 intergenic CG8564 - chr3L 7388327 intergenic CG8564 - chr3L 7388441 intergenic not near genes chr3L_4_7385001 chr3L_7385001 RAL-301_125b 2381 chr3L 7443973 7444003 chr3L 7444121 7444150 10 146 17.0 0.0 8.5 1.1 177 chr3L 7443973 intron CG42458 + chr3L 7444062 intron CG42458 + chr3L 7444150 intron CG42458 + chr3L_10_7440001 chr3L_7440001 RAL-301_125b 2382 chr3L 7444004 7444047 chr3L 7444119 7444187 5 140 7.0 0.0 3.5 1.1 183 chr3L 7444004 intron CG42458 + chr3L 7444096 intron CG42458 + chr3L 7444187 intron CG42458 + chr3L_5_7440001 chr3L_7440001 RAL-301_125b 2383 chr3L 7449445 7449451 chr3L 7449573 7449579 5 128 0.0 4.0 2.0 1.7 134 chr3L 7449445 intron CG42458 + chr3L 7449512 intron CG42458 + chr3L 7449579 intron CG42458 + chr3L_5_7445001 chr3L_7445001 RAL-301_125b 2384 chr3L 7450640 7450716 chr3L 7450772 7450846 24 131 9.0 6.5 7.8 2.7 206 chr3L 7450640 intron CG42458 + chr3L 7450743 intron CG42458 + chr3L 7450846 intron CG42458 + chr3L_24_7450001 chr3L_7450001 RAL-301_125b 2385 chr3L 7460329 7460402 chr3L 7460463 7460536 27 134 7.5 9.0 8.2 2.9 207 chr3L 7460329 intergenic not near genes chr3L 7460432 intergenic not near genes chr3L 7460536 intergenic not near genes chr3L_27_7460001 chr3L_7460001 RAL-301_125b 2386 chr3L 7462909 7462991 chr3L 7463036 7463121 14 128 5.5 5.0 5.2 2.3 212 chr3L 7462909 intergenic not near genes chr3L 7463015 intergenic not near genes chr3L 7463121 intergenic not near genes chr3L_14_7460001 chr3L_7460001 RAL-301_125b 2387 chr3L 7464839 7464891 chr3L 7464932 7465003 24 116 5.5 7.0 6.2 3.3 164 chr3L 7464839 intergenic not near genes chr3L 7464921 intergenic not near genes chr3L 7465003 intergenic not near genes chr3L_24_7460001 chr3L_7460001 RAL-301_125b 2388 chr3L 7480013 7480073 chr3L 7480152 7480212 27 139 8.0 14.0 11.0 2.2 199 chr3L 7480013 intergenic not near genes chr3L 7480112 intergenic not near genes chr3L 7480212 intergenic not near genes chr3L_27_7480001 chr3L_7480001 RAL-301_125b 2389 chr3L 7498728 7498773 chr3L 7503555 7503600 F-element 23 4827 11.0 15.0 13.0 1.6 4872 chr3L 7498728 5` UTR CG8539 - chr3L 7501164 intergenic not near genes chr3L 7503600 intergenic not near genes chr3L_23_7500001 chr3L_7500001 RAL-301_125b 2390 chr3L 7498775 7498784 chr3L 7503546 7503601 F-element 4 4810 9.0 12.5 10.8 0.3 4826 chr3L 7498775 5` UTR CG8539 - chr3L 7501188 intergenic not near genes chr3L 7503601 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-301_125b 2391 chr3L 7505384 7505433 chr3L 7505510 7505559 20 126 2.5 12.0 7.2 2.4 175 chr3L 7505384 intergenic CG7548 - chr3L 7505472 intergenic CG7548 - chr3L 7505559 3` UTR CG7548 - chr3L_20_7505001 chr3L_7505001 RAL-301_125b 2392 chr3L 7524100 7524174 chr3L 7524227 7524306 28 132 5.0 3.0 4.0 5.6 206 chr3L 7524100 intron ltl + chr3L 7524203 intron ltl + chr3L 7524306 intron ltl + chr3L_28_7520001 chr3L_7520001 RAL-301_125b 2393 chr3L 7540924 7540998 chr3L 7542025 7542099 21 1094 8.5 10.5 9.5 2.0 1175 chr3L 7540924 exon CG32374 - chr3L 7541512 intergenic CG32376 -,CG32374 - chr3L 7542099 exon CG32376 - chr3L_21_7540001 chr3L_7540001 RAL-301_125b 2394 chr3L 7546979 7546988 chr3L 7547116 7547137 4 145 8.0 22.5 15.2 0.2 158 chr3L 7546979 intergenic not near genes chr3L 7547058 intergenic not near genes chr3L 7547137 intergenic not near genes chr3L_4_7545001 chr3L_7545001 RAL-301_125b 2395 chr3L 7574794 7574807 chr3L 7574934 7574947 6 140 7.0 2.5 4.8 1.0 153 chr3L 7574794 intergenic not near genes chr3L 7574870 intergenic not near genes chr3L 7574947 intergenic not near genes chr3L_6_7570001 chr3L_7570001 RAL-301_125b 2396 chr3L 7576160 7576240 chr3L 7576298 7576378 23 137 6.0 6.5 6.2 3.2 218 chr3L 7576160 intergenic not near genes chr3L 7576269 intergenic not near genes chr3L 7576378 intergenic not near genes chr3L_23_7575001 chr3L_7575001 RAL-301_125b 2397 chr3L 7581589 7581604 chr3L 7581708 7581725 12 129 19.0 4.5 11.8 0.9 136 chr3L 7581589 intergenic not near genes chr3L 7581657 intergenic not near genes chr3L 7581725 intergenic not near genes chr3L_12_7580001 chr3L_7580001 RAL-301_125b 2398 chr3L 7581607 7581651 chr3L 7581705 7581785 13 119 10.5 4.5 7.5 1.5 178 chr3L 7581607 intergenic not near genes chr3L 7581696 intergenic not near genes chr3L 7581785 intergenic not near genes chr3L_13_7580001 chr3L_7580001 RAL-301_125b 2399 chr3L 7793672 7793733 chr3L 7800774 7800835 297 25 7102 9.0 12.0 10.5 2.2 7163 chr3L 7793672 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800835 intron CG32369 - chr3L_25_7795001 chr3L_7795001 RAL-301_125b 2400 chr3L 7801510 7801552 chr3L 7801641 7801683 10 131 7.0 9.0 8.0 1.1 173 chr3L 7801510 intron CG32369 - chr3L 7801596 intron CG32369 - chr3L 7801683 intron CG32369 - chr3L_10_7800001 chr3L_7800001 RAL-301_125b 2401 chr3L 7814659 7814729 chr3L 7814794 7814864 31 135 8.5 9.0 8.8 3.2 205 chr3L 7814659 3` UTR Pdp1 - chr3L 7814762 3` UTR Pdp1 - chr3L 7814864 3` UTR Pdp1 - chr3L_31_7810001 chr3L_7810001 RAL-301_125b 2402 chr3L 7845344 7845418 chr3L 7845477 7845550 19 132 5.5 5.5 5.5 2.9 206 chr3L 7845344 intron Pdp1 - chr3L 7845447 intron Pdp1 - chr3L 7845550 intron Pdp1 - chr3L_19_7845001 chr3L_7845001 RAL-301_125b 2403 chr3L 7865700 7865771 chr3L 7865850 7865922 29 150 8.5 12.5 10.5 2.5 222 chr3L 7865700 intron Pdp1 - chr3L 7865811 intron Pdp1 - chr3L 7865922 intron Pdp1 - chr3L_29_7865001 chr3L_7865001 RAL-301_125b 2404 chr3L 7868558 7868584 chr3L 7868687 7868713 14 129 0.0 10.5 5.2 2.3 155 chr3L 7868558 intergenic CG32365 + chr3L 7868636 intergenic CG32365 + chr3L 7868713 intergenic CG32365 + chr3L_14_7865001 chr3L_7865001 RAL-301_125b 2405 chr3L 7871042 7871057 chr3L 7871191 7871206 12 148 7.0 13.5 10.2 1.1 164 chr3L 7871042 intron CG32365 + chr3L 7871124 intron CG32365 + chr3L 7871206 intron CG32365 + chr3L_12_7870001 chr3L_7870001 RAL-301_125b 2406 chr3L 7874980 7875061 chr3L 7876859 7876941 17 1880 13.5 49.0 31.2 0.5 1961 chr3L 7874980 intron CG32365 + chr3L 7875960 intron CG32365 + chr3L 7876941 intron CG32365 + chr3L_17_7875001 chr3L_7875001 RAL-301_125b 2407 chr3L 7874873 7874888 chr3L 7877207 7877222 11 2335 21.5 60.5 41.0 0.3 2349 chr3L 7874873 intron CG32365 + chr3L 7876048 intron CG32365 + chr3L 7877222 intron CG32365 + chr3L_11_7875001 chr3L_7875001 RAL-301_125b 2408 chr3L 7886521 7886535 chr3L 7889090 7889104 Stalker4 4 2569 0.0 18.5 9.2 0.4 2583 chr3L 7886521 intron CG32365 + chr3L 7887812 intron CG32365 + chr3L 7889104 intron CG32365 + chr3L_4_7885001 chr3L_7885001 RAL-301_125b 2409 chr3L 7916791 7916851 chr3L 7926012 7926072 roo 26 9221 8.0 10.5 9.2 2.5 9281 chr3L 7916791 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926072 3` UTR syd - chr3L_26_7920001 chr3L_7920001 RAL-301_125b 2410 chr3L 7985323 7985387 chr3L 7987701 7987765 NOF 21 2374 11.5 12.0 11.8 1.6 2442 chr3L 7985323 intron nmo + chr3L 7986544 intron nmo + chr3L 7987765 intron nmo + chr3L_21_7985001 chr3L_7985001 RAL-301_125b 2411 chr3L 7988874 7988939 chr3L 7989028 7989095 10 155 5.5 0.0 2.8 2.6 221 chr3L 7988874 intron nmo + chr3L 7988984 intron nmo + chr3L 7989095 intron nmo + chr3L_10_7985001 chr3L_7985001 RAL-301_125b 2412 chr3L 7990867 7990877 chr3L 7991006 7991016 5 139 0.0 22.0 11.0 0.4 149 chr3L 7990867 intron nmo + chr3L 7990942 intron nmo + chr3L 7991016 intron nmo + chr3L_5_7990001 chr3L_7990001 RAL-301_125b 2413 chr3L 7990878 7990884 chr3L 7990956 7991023 6 129 0.0 9.5 4.8 1.0 145 chr3L 7990878 intron nmo + chr3L 7990950 intron nmo + chr3L 7991023 intron nmo + chr3L_6_7990001 chr3L_7990001 RAL-301_125b 2414 chr3L 7995908 7995978 chr3L 7996066 7996129 20 153 10.0 1.0 5.5 3.1 221 chr3L 7995908 intron nmo + chr3L 7996018 intron nmo + chr3L 7996129 intron nmo + chr3L_20_7995001 chr3L_7995001 RAL-301_125b 2415 chr3L 8019662 8019699 chr3L 8024124 8024160 NOF 13 4460 14.0 6.5 10.2 1.2 4498 chr3L 8019662 intron nmo + chr3L 8021911 intron nmo + chr3L 8024160 intron nmo + chr3L_13_8020001 chr3L_8020001 RAL-301_125b 2416 chr3L 8019703 8019728 chr3L 8024116 8024191 NOF 8 4447 7.5 6.0 6.8 1.0 4488 chr3L 8019703 intron nmo + chr3L 8021947 intron nmo + chr3L 8024191 intron nmo + chr3L_8_8020001 chr3L_8020001 RAL-301_125b 2417 chr3L 8041505 8041570 chr3L 8041633 8041698 23 128 10.5 11.0 10.8 1.9 193 chr3L 8041505 intron nmo + chr3L 8041602 intron nmo + chr3L 8041698 intron nmo + chr3L_23_8040001 chr3L_8040001 RAL-301_125b 2418 chr3L 8062808 8062850 chr3L 8062930 8062978 22 125 8.5 13.5 11.0 1.8 170 chr3L 8062808 intergenic not near genes chr3L 8062893 intergenic not near genes chr3L 8062978 intergenic not near genes chr3L_22_8060001 chr3L_8060001 RAL-301_125b 2419 chr3L 8064703 8064722 chr3L 8064882 8064902 9 180 18.0 8.5 13.2 0.6 199 chr3L 8064703 intron Ect4 + chr3L 8064802 intron Ect4 + chr3L 8064902 intron Ect4 + chr3L_9_8060001 chr3L_8060001 RAL-301_125b 2420 chr3L 8081229 8081307 chr3L 8081382 8081460 33 152 8.5 8.5 8.5 3.5 231 chr3L 8081229 intron Ect4 + chr3L 8081344 intron Ect4 + chr3L 8081460 intron Ect4 + chr3L_33_8080001 chr3L_8080001 RAL-301_125b 2421 chr3L 8149710 8149776 chr3L 8149866 8149932 30 156 7.0 10.5 8.8 3.1 222 chr3L 8149710 intron CG13676 - chr3L 8149821 intron CG13676 - chr3L 8149932 intron CG13676 - chr3L_30_8145001 chr3L_8145001 RAL-301_125b 2422 chr3L 8165924 8165989 chr3L 8166058 8166120 18 134 8.5 10.5 9.5 1.7 196 chr3L 8165924 intergenic CG13675 - chr3L 8166022 intergenic not near genes chr3L 8166120 intergenic not near genes chr3L_18_8165001 chr3L_8165001 RAL-301_125b 2423 chr3L 8203491 8203569 chr3L 8203618 8203696 29 122 9.0 6.5 7.8 3.3 205 chr3L 8203491 intergenic CG13679 + chr3L 8203594 intergenic CG13679 + chr3L 8203696 intergenic CG13679 + chr3L_29_8200001 chr3L_8200001 RAL-301_125b 2424 chr3L 8210755 8210807 chr3L 8210920 8210972 18 165 3.5 8.5 6.0 2.6 217 chr3L 8210755 intergenic CG32364 - chr3L 8210864 intergenic CG32364 - chr3L 8210972 intergenic CG32364 - chr3L_18_8210001 chr3L_8210001 RAL-301_125b 2425 chr3L 8214691 8214758 chr3L 8214820 8214894 20 133 6.5 6.0 6.2 2.8 203 chr3L 8214691 intergenic not near genes chr3L 8214792 intergenic CG8012 + chr3L 8214894 intergenic CG8012 + chr3L_20_8210001 chr3L_8210001 RAL-301_125b 2426 chr3L 8226670 8226750 chr3L 8226819 8226892 21 147 5.5 0.0 2.8 5.5 222 chr3L 8226670 intergenic not near genes chr3L 8226781 intergenic not near genes chr3L 8226892 intergenic not near genes chr3L_21_8225001 chr3L_8225001 RAL-301_125b 2427 chr3L 8233541 8233588 chr3L 8238853 8238900 Rt1a 17 5311 7.5 19.0 13.2 1.2 5359 chr3L 8233541 intron CG7213 - chr3L 8236220 intron CG7213 - chr3L 8238900 intron,intron CG7213 -,Dscam4 + chr3L_17_8235001 chr3L_8235001 RAL-301_125b 2428 chr3L 8243780 8243789 chr3L 8243913 8243922 4 133 21.0 10.5 15.8 0.2 142 chr3L 8243780 intron Dscam4 + chr3L 8243851 intron Dscam4 + chr3L 8243922 intron Dscam4 + chr3L_4_8240001 chr3L_8240001 RAL-301_125b 2429 chr3L 8243790 8243840 chr3L 8243911 8243973 18 131 7.5 10.0 8.8 1.8 183 chr3L 8243790 intron Dscam4 + chr3L 8243882 intron Dscam4 + chr3L 8243973 intron Dscam4 + chr3L_18_8240001 chr3L_8240001 RAL-301_125b 2430 chr3L 8273011 8273084 chr3L 8273160 8273196 33 146 9.5 8.5 9.0 3.3 185 chr3L 8273011 intron Dscam4 + chr3L 8273104 intron Dscam4 + chr3L 8273196 exon Dscam4 + chr3L_33_8270001 chr3L_8270001 RAL-301_125b 2431 chr3L 8295752 8295813 chr3L 8295960 8296021 25 208 12.0 10.0 11.0 2.1 269 chr3L 8295752 intergenic CG7201 - chr3L 8295886 intergenic not near genes chr3L 8296021 intergenic not near genes chr3L_25_8295001 chr3L_8295001 RAL-301_125b 2432 chr3L 8363682 8363736 chr3L 8363812 8363868 9 132 14.5 0.0 7.2 1.1 186 chr3L 8363682 intergenic not near genes chr3L 8363775 intergenic not near genes chr3L 8363868 intergenic not near genes chr3L_9_8360001 chr3L_8360001 RAL-301_125b 2433 chr3L 8395788 8395864 chr3L 8395934 8395966 30 140 5.0 5.5 5.2 4.8 178 chr3L 8395788 intergenic CG7120 + chr3L 8395877 intergenic CG7120 + chr3L 8395966 intergenic CG7120 + chr3L_30_8395001 chr3L_8395001 RAL-301_125b 2434 chr3L 8443518 8443581 chr3L 8443649 8443713 31 131 8.0 9.0 8.5 3.3 195 chr3L 8443518 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443713 3` UTR CG6983 - chr3L_31_8440001 chr3L_8440001 RAL-301_125b 2435 chr3L 8451329 8451411 chr3L 8451466 8451539 26 136 4.5 11.0 7.8 3.0 210 chr3L 8451329 intron Gug + chr3L 8451434 intron Gug + chr3L 8451539 intron Gug + chr3L_26_8450001 chr3L_8450001 RAL-301_125b 2436 chr3L 8456442 8456486 chr3L 8456569 8456593 20 124 21.5 17.5 19.5 1.0 151 chr3L 8456442 intron Gug + chr3L 8456518 intron Gug + chr3L 8456593 intron Gug + chr3L_20_8455001 chr3L_8455001 RAL-301_125b 2437 chr3L 8481749 8481803 chr3L 8490930 8490981 roo 18 9194 7.0 8.0 7.5 2.1 9232 chr3L 8481749 intron CG43163 - chr3L 8486365 intron CG43163 - chr3L 8490981 intron CG43163 - chr3L_18_8485001 chr3L_8485001 RAL-301_125b 2438 chr3L 8498258 8498321 chr3L 8505775 8505838 blood 31 7516 9.0 17.0 13.0 2.2 7580 chr3L 8498258 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505838 intron CG43163 - chr3L_31_8500001 chr3L_8500001 RAL-301_125b 2439 chr3L 8516281 8516307 chr3L 8519295 8519372 33 3021 67.5 86.5 77.0 0.4 3091 chr3L 8516281 exon CG6765 + chr3L 8517826 3` UTR CG6765 + chr3L 8519372 intron GstO3 + chr3L_33_8515001 chr3L_8515001 RAL-301_125b 2440 chr3L 8576225 8576264 chr3L 8576369 8576408 22 144 0.5 6.0 3.2 5.2 183 chr3L 8576225 intergenic CG6638 - chr3L 8576316 intergenic CG6638 -,CG43078 + chr3L 8576408 intergenic CG6638 -,CG43078 + chr3L_22_8575001 chr3L_8575001 RAL-301_125b 2441 chr3L 8579818 8579879 chr3L 8579932 8579985 29 123 10.5 9.5 10.0 2.6 167 chr3L 8579818 intron CG43078 + chr3L 8579902 intron CG43078 + chr3L 8579985 intron CG43078 + chr3L_29_8575001 chr3L_8575001 RAL-301_125b 2442 chr3L 8643589 8643659 chr3L 8643723 8643794 10 134 0.0 7.0 3.5 2.2 205 chr3L 8643589 intergenic Cpr66D + chr3L 8643692 intergenic Cpr66D + chr3L 8643794 intergenic Cpr66D + chr3L_10_8640001 chr3L_8640001 RAL-301_125b 2443 chr3L 8697242 8697289 chr3L 8697372 8697419 27 130 11.0 13.0 12.0 2.1 177 chr3L 8697242 intergenic not near genes chr3L 8697330 intergenic not near genes chr3L 8697419 intergenic not near genes chr3L_27_8695001 chr3L_8695001 RAL-301_125b 2444 chr3L 8751663 8751704 chr3L 8751793 8751834 21 129 12.5 19.0 15.8 1.2 171 chr3L 8751663 3` UTR CR44527 - chr3L 8751748 intergenic CR44527 - chr3L 8751834 intergenic CR44527 - chr3L_21_8750001 chr3L_8750001 RAL-301_125b 2445 chr3L 8791231 8791306 chr3L 8796701 8796775 I-element 14 5469 7.0 0.0 3.5 3.1 5544 chr3L 8791231 exon Fhos + chr3L 8794003 intron Fhos + chr3L 8796775 intron Fhos + chr3L_14_8790001 chr3L_8790001 RAL-301_125b 2446 chr3L 8830710 8830763 chr3L 8830861 8830904 20 149 11.0 8.5 9.8 1.9 194 chr3L 8830710 intron dally + chr3L 8830807 intron dally + chr3L 8830904 intron dally + chr3L_20_8830001 chr3L_8830001 RAL-301_125b 2447 chr3L 8839676 8839751 chr3L 8839806 8839881 24 130 5.5 7.0 6.2 3.3 205 chr3L 8839676 intron dally + chr3L 8839778 intron dally + chr3L 8839881 intron dally + chr3L_24_8835001 chr3L_8835001 RAL-301_125b 2448 chr3L 8849379 8849395 chr3L 8849516 8849532 18 137 10.5 15.5 13.0 1.3 153 chr3L 8849379 intron dally + chr3L 8849456 intron dally + chr3L 8849532 intron dally + chr3L_18_8845001 chr3L_8845001 RAL-301_125b 2449 chr3L 8853308 8853379 chr3L 8853439 8853510 38 126 6.5 8.0 7.2 4.6 202 chr3L 8853308 intron dally + chr3L 8853409 intron dally + chr3L 8853510 intron dally + chr3L_38_8850001 chr3L_8850001 RAL-301_125b 2450 chr3L 8861475 8861553 chr3L 8861616 8861694 29 141 6.5 5.5 6.0 4.1 219 chr3L 8861475 intron dally + chr3L 8861584 intron dally + chr3L 8861694 intron dally + chr3L_29_8860001 chr3L_8860001 RAL-301_125b 2451 chr3L 8879916 8879937 chr3L 8880034 8880064 6 119 0.0 18.0 9.0 0.6 148 chr3L 8879916 intron dally + chr3L 8879990 intron dally + chr3L 8880064 intron dally + chr3L_6_8875001 chr3L_8875001 RAL-301_125b 2452 chr3L 8884355 8884425 chr3L 8884604 8884674 23 245 7.5 3.5 5.5 3.5 319 chr3L 8884355 intron dally + chr3L 8884514 intron dally + chr3L 8884674 intron dally + chr3L_23_8880001 chr3L_8880001 RAL-301_125b 2453 chr3L 8912125 8912168 chr3L 8912263 8912305 20 138 20.5 0.0 10.2 1.8 180 chr3L 8912125 5` UTR mfr - chr3L 8912215 intron mfr - chr3L 8912305 intron mfr - chr3L_20_8910001 chr3L_8910001 RAL-301_125b 2454 chr3L 8959348 8959400 chr3L 8959559 8959611 21 209 6.5 10.5 8.5 2.2 263 chr3L 8959348 intron CG13313 + chr3L 8959480 intron CG13313 + chr3L 8959611 intron CG13313 + chr3L_21_8955001 chr3L_8955001 RAL-301_125b 2455 chr3L 8980238 8980250 chr3L 8980367 8980379 7 129 13.5 0.0 6.8 0.9 141 chr3L 8980238 intergenic CG5644 - chr3L 8980308 intergenic CG5644 - chr3L 8980379 intergenic CG5644 - chr3L_7_8980001 chr3L_8980001 RAL-301_125b 2456 chr3L 9030379 9030450 chr3L 9030508 9030579 24 129 5.5 10.0 7.8 2.7 200 chr3L 9030379 intergenic not near genes chr3L 9030479 intergenic not near genes chr3L 9030579 intergenic not near genes chr3L_24_9030001 chr3L_9030001 RAL-301_125b 2457 chr3L 9036250 9036291 chr3L 9036382 9036427 6 133 18.0 11.0 14.5 0.4 177 chr3L 9036250 intergenic not near genes chr3L 9036338 intergenic not near genes chr3L 9036427 intergenic not near genes chr3L_6_9035001 chr3L_9035001 RAL-301_125b 2458 chr3L 9076891 9076901 chr3L 9084501 9084511 412 6 7610 27.0 13.5 20.2 0.3 7620 chr3L 9076891 exon Tequila + chr3L 9080701 intron Tequila + chr3L 9084511 exon Tequila + chr3L_6_9080001 chr3L_9080001 RAL-301_125b 2459 chr3L 9076905 9076934 chr3L 9084495 9084544 412 12 7606 19.0 12.5 15.8 0.7 7639 chr3L 9076905 exon Tequila + chr3L 9080724 intron Tequila + chr3L 9084544 exon Tequila + chr3L_12_9080001 chr3L_9080001 RAL-301_125b 2460 chr3L 9076935 9076959 chr3L 9084490 9084559 412 12 7603 12.0 11.5 11.8 0.9 7624 chr3L 9076935 exon Tequila + chr3L 9080747 intron Tequila + chr3L 9084559 exon Tequila + chr3L_12_9080001 chr3L_9080001 RAL-301_125b 2461 chr3L 9118338 9118346 chr3L 9118449 9118476 5 125 16.0 15.0 15.5 0.3 138 chr3L 9118338 intron bol - chr3L 9118407 intron bol - chr3L 9118476 intron bol - chr3L_5_9115001 chr3L_9115001 RAL-301_125b 2462 chr3L 9128150 9128218 chr3L 9128285 9128353 43 135 9.0 7.0 8.0 4.8 203 chr3L 9128150 intron bol - chr3L 9128252 intron bol - chr3L 9128353 intron bol - chr3L_43_9125001 chr3L_9125001 RAL-301_125b 2463 chr3L 9130525 9130560 chr3L 9134327 9134371 412 13 3809 12.0 9.5 10.8 1.1 3846 chr3L 9130525 intergenic bol - chr3L 9132448 intergenic not near genes chr3L 9134371 intergenic Dhpr + chr3L_13_9130001 chr3L_9130001 RAL-301_125b 2464 chr3L 9130563 9130579 chr3L 9134323 9134390 412 6 3801 11.5 9.5 10.5 0.5 3827 chr3L 9130563 intergenic bol - chr3L 9132476 intergenic not near genes chr3L 9134390 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-301_125b 2465 chr3L 9143336 9143392 chr3L 9143505 9143552 4 166 0.0 5.5 2.8 1.1 216 chr3L 9143336 intron nwk + chr3L 9143444 intron nwk + chr3L 9143552 exon nwk + chr3L_4_9140001 chr3L_9140001 RAL-301_125b 2466 chr3L 9164657 9164684 chr3L 9166174 9166201 hobo 12 1517 15.0 0.5 7.8 1.4 1544 chr3L 9164657 intron Rdl - chr3L 9165429 intron Rdl - chr3L 9166201 intron Rdl - chr3L_12_9165001 chr3L_9165001 RAL-301_125b 2467 chr3L 9173632 9173639 chr3L 9173894 9173901 4 262 22.0 8.0 15.0 0.2 269 chr3L 9173632 intron Rdl - chr3L 9173766 intron Rdl - chr3L 9173901 intron Rdl - chr3L_4_9170001 chr3L_9170001 RAL-301_125b 2468 chr3L 4619431 4619434 chr3L 9209134 9209137 5 4589703 8.0 4.5 6.2 0.7 4589706 chr3L 4619431 intron Src64B - chr3L 6914284 intron Prat2 - chr3L 9209137 intergenic Slc45-1 - chr3L_5_6910001 chr3L_6910001 RAL-301_125b 2469 chr3L 9219204 9219216 chr3L 9219926 9219938 jockey 4 722 20.0 9.5 14.8 0.3 734 chr3L 9219204 intergenic not near genes chr3L 9219571 intergenic not near genes chr3L 9219938 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-301_125b 2470 chr3L 9219217 9219267 chr3L 9219921 9219948 jockey 22 713 9.5 7.5 8.5 2.3 731 chr3L 9219217 intergenic not near genes chr3L 9219582 intergenic not near genes chr3L 9219948 intergenic not near genes chr3L_22_9215001 chr3L_9215001 RAL-301_125b 2471 chr3L 9270573 9270649 chr3L 9278378 9278414 roo 27 7797 7.0 6.5 6.8 3.5 7841 chr3L 9270573 intron GluRIB + chr3L 9274494 intron GluRIB + chr3L 9278414 exon GluRIB + chr3L_27_9270001 chr3L_9270001 RAL-301_125b 2472 chr3L 9307795 9307795 chr3L 18417066 18417066 7 9109271 28.5 32.5 30.5 0.2 9109271 chr3L 9307795 intergenic not near genes chr3L 13862430 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_7_13860001 chr3L_13860001 RAL-301_125b 2473 chr3L 9307796 9307796 chr3L 18417066 18417066 6 9109270 28.5 32.5 30.5 0.2 9109270 chr3L 9307796 intergenic not near genes chr3L 13862431 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_6_13860001 chr3L_13860001 RAL-301_125b 2474 chr3L 9307796 9307796 chr3L 22908066 22908066 15 13600270 28.5 44.5 36.5 0.4 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_15_16105001 chr3L_16105001 RAL-301_125b 2475 chr3L 9312675 9312732 chr3L 9312803 9312860 27 127 15.5 8.5 12.0 2.1 185 chr3L 9312675 intergenic not near genes chr3L 9312768 intergenic not near genes chr3L 9312860 intergenic not near genes chr3L_27_9310001 chr3L_9310001 RAL-301_125b 2476 chr3L 9348416 9348460 chr3L 9348968 9349012 13 551 10.5 0.0 5.2 2.1 596 chr3L 9348416 intergenic PGRP-LC + chr3L 9348714 intergenic PGRP-LC + chr3L 9349012 intergenic not near genes chr3L_13_9345001 chr3L_9345001 RAL-301_125b 2477 chr3L 9359541 9359614 chr3L 9359682 9359748 20 141 6.0 10.5 8.2 2.2 207 chr3L 9359541 3` UTR CG32039 + chr3L 9359644 3` UTR CG32039 + chr3L 9359748 3` UTR CG32039 + chr3L_20_9355001 chr3L_9355001 RAL-301_125b 2478 chr3L 9443492 9443533 chr3L 9445333 9445374 S-element 13 1841 7.0 16.5 11.8 1.0 1882 chr3L 9443492 intron CG33926 + chr3L 9444433 intron CG33926 + chr3L 9445374 intron CG33926 + chr3L_13_9440001 chr3L_9440001 RAL-301_125b 2479 chr3L 9501661 9501726 chr3L 9502197 9502262 roo 22 535 4.5 10.0 7.2 2.7 601 chr3L 9501661 intron path - chr3L 9501962 intron path - chr3L 9502262 intron path - chr3L_22_9500001 chr3L_9500001 RAL-301_125b 2480 chr3L 9503454 9503458 chr3L 9503607 9503611 5 153 9.5 10.0 9.8 0.5 157 chr3L 9503454 intron path - chr3L 9503532 intron path - chr3L 9503611 intron path - chr3L_5_9500001 chr3L_9500001 RAL-301_125b 2481 chr3L 9526474 9526514 chr3L 9528189 9528229 Doc 12 1715 6.0 5.5 5.8 1.8 1755 chr3L 9526474 intergenic not near genes chr3L 9527352 intergenic not near genes chr3L 9528229 intergenic not near genes chr3L_12_9525001 chr3L_9525001 RAL-301_125b 2482 chr3L 9533714 9533754 chr3L 9541324 9541324 412 8 7601 11.0 10.5 10.8 0.7 7610 chr3L 9533714 intergenic not near genes chr3L 9537519 intergenic not near genes chr3L 9541324 intergenic not near genes chr3L_8_9535001 chr3L_9535001 RAL-301_125b 2483 chr3L 9555926 9555957 chr3L 9556054 9556072 14 125 5.5 18.0 11.8 1.1 146 chr3L 9555926 intron CG42673 + chr3L 9555999 intron CG42673 + chr3L 9556072 intron CG42673 + chr3L_14_9555001 chr3L_9555001 RAL-301_125b 2484 chr3L 9559328 9559408 chr3L 9559513 9559593 31 180 10.0 6.0 8.0 3.4 265 chr3L 9559328 intron CG42673 + chr3L 9559460 intron CG42673 + chr3L 9559593 intron CG42673 + chr3L_31_9555001 chr3L_9555001 RAL-301_125b 2485 chr3L 9571860 9571923 chr3L 9572258 9572321 jockey 28 397 9.5 9.0 9.2 2.7 461 chr3L 9571860 intron CG42673 + chr3L 9572090 intron CG42673 + chr3L 9572321 intron CG42673 + chr3L_28_9570001 chr3L_9570001 RAL-301_125b 2486 chr3L 9575869 9575939 chr3L 9580997 9581068 jockey 28 5128 9.0 11.0 10.0 2.5 5199 chr3L 9575869 intron CG42673 + chr3L 9578468 intron CG42673 + chr3L 9581068 intron CG42673 + chr3L_28_9575001 chr3L_9575001 RAL-301_125b 2487 chr3L 9600297 9600369 chr3L 9600446 9600507 7 145 10.0 0.0 5.0 1.2 210 chr3L 9600297 3` UTR CG3222 + chr3L 9600402 intergenic CG3222 +,CG3088 - chr3L 9600507 3` UTR CG3088 - chr3L_7_9600001 chr3L_9600001 RAL-301_125b 2488 chr3L 9604196 9604246 chr3L 9604340 9604390 19 144 0.0 5.5 2.8 5.0 194 chr3L 9604196 intron CG3280 + chr3L 9604293 intron CG3280 + chr3L 9604390 intron CG3280 + chr3L_19_9600001 chr3L_9600001 RAL-301_125b 2489 chr3L 9646424 9646452 chr3L 9646599 9646607 4 165 18.5 0.0 9.2 0.4 183 chr3L 9646424 intron,intron fry -,CG33696 + chr3L 9646516 intron,intron fry -,CG33696 + chr3L 9646607 intron,intron fry -,CG33696 + chr3L_4_9645001 chr3L_9645001 RAL-301_125b 2490 chr3L 9646457 9646503 chr3L 9646597 9646678 12 168 6.5 0.0 3.2 2.9 221 chr3L 9646457 intron,intron fry -,CG33696 + chr3L 9646568 intron,intron fry -,CG33696 + chr3L 9646678 intron,intron fry -,CG33696 + chr3L_12_9645001 chr3L_9645001 RAL-301_125b 2491 chr3L 9646764 9646776 chr3L 9646912 9646924 10 148 22.0 9.5 15.8 0.6 160 chr3L 9646764 intron,intron fry -,CG33696 + chr3L 9646844 intron,intron fry -,CG33696 + chr3L 9646924 intron,intron fry -,CG33696 + chr3L_10_9645001 chr3L_9645001 RAL-301_125b 2492 chr3L 9646777 9646809 chr3L 9646905 9646957 19 147 17.5 7.5 12.5 1.4 180 chr3L 9646777 intron,intron fry -,CG33696 + chr3L 9646867 intron,intron fry -,CG33696 + chr3L 9646957 intron,intron fry -,CG33696 + chr3L_19_9645001 chr3L_9645001 RAL-301_125b 2493 chr3L 9665794 9665854 chr3L 9666060 9666120 29 265 12.0 10.5 11.2 2.4 326 chr3L 9665794 intron fry - chr3L 9665957 intron fry - chr3L 9666120 intron fry - chr3L_29_9665001 chr3L_9665001 RAL-301_125b 2494 chr3L 9754699 9754709 chr3L 9754833 9754843 4 134 10.0 0.0 5.0 0.7 144 chr3L 9754699 intron CG42268 - chr3L 9754771 intron CG42268 - chr3L 9754843 intron CG42268 - chr3L_4_9750001 chr3L_9750001 RAL-301_125b 2495 chr3L 9775319 9775396 chr3L 9775728 9775806 26 409 6.5 5.0 5.8 3.8 487 chr3L 9775319 intron CG8177 + chr3L 9775562 intron CG8177 + chr3L 9775806 intron CG8177 + chr3L_26_9775001 chr3L_9775001 RAL-301_125b 2496 chr3L 9800520 9800542 chr3L 9800658 9800680 15 138 0.0 3.5 1.8 5.4 160 chr3L 9800520 intron CG32052 + chr3L 9800600 intron CG32052 + chr3L 9800680 intron CG32052 + chr3L_15_9800001 chr3L_9800001 RAL-301_125b 2497 chr3L 9831667 9831724 chr3L 9831798 9831855 18 130 1.0 9.0 5.0 3.0 188 chr3L 9831667 intron CG43897 + chr3L 9831761 intron CG43897 + chr3L 9831855 intron CG43897 + chr3L_18_9830001 chr3L_9830001 RAL-301_125b 2498 chr3L 9895311 9895336 chr3L 9895441 9895466 19 130 19.5 10.0 14.8 1.2 155 chr3L 9895311 3` UTR CG6707 - chr3L 9895388 3` UTR CG6707 - chr3L 9895466 3` UTR CG6707 - chr3L_19_9895001 chr3L_9895001 RAL-301_125b 2499 chr3L 9895342 9895383 chr3L 9895437 9895513 17 121 8.0 11.0 9.5 1.6 171 chr3L 9895342 3` UTR CG6707 - chr3L 9895428 3` UTR CG6707 - chr3L 9895513 3` UTR CG6707 - chr3L_17_9895001 chr3L_9895001 RAL-301_125b 2500 chr3L 9918759 9918814 chr3L 9919009 9919072 30 260 9.5 9.5 9.5 2.9 313 chr3L 9918759 intron CG34356 + chr3L 9918916 intron CG34356 + chr3L 9919072 intron CG34356 + chr3L_30_9915001 chr3L_9915001 RAL-301_125b 2501 chr3L 9929628 9929637 chr3L 9938457 9938467 roo 4 8830 19.5 9.5 14.5 0.3 8839 chr3L 9929628 intron CG34356 + chr3L 9934048 intron CG34356 + chr3L 9938467 intron CG34356 + chr3L_4_9930001 chr3L_9930001 RAL-301_125b 2502 chr3L 9929639 9929657 chr3L 9938450 9938487 roo 9 8828 13.5 7.5 10.5 0.8 8848 chr3L 9929639 intron CG34356 + chr3L 9934063 intron CG34356 + chr3L 9938487 intron CG34356 + chr3L_9_9930001 chr3L_9930001 RAL-301_125b 2503 chr3L 9929659 9929693 chr3L 9938448 9938523 roo 8 8817 8.5 7.0 7.8 0.9 8864 chr3L 9929659 intron CG34356 + chr3L 9934091 intron CG34356 + chr3L 9938523 intron CG34356 + chr3L_8_9930001 chr3L_9930001 RAL-301_125b 2504 chr3L 9938462 9938476 chr3L 9938589 9938598 4 126 9.5 9.0 9.2 0.4 136 chr3L 9938462 intron CG34356 + chr3L 9938530 intron CG34356 + chr3L 9938598 intron CG34356 + chr3L_4_9935001 chr3L_9935001 RAL-301_125b 2505 chr3L 9945636 9945643 chr3L 9945768 9945775 4 132 11.5 9.5 10.5 0.3 139 chr3L 9945636 intron CG34356 + chr3L 9945706 intron CG34356 + chr3L 9945775 intron CG34356 + chr3L_4_9945001 chr3L_9945001 RAL-301_125b 2506 chr3L 9966783 9966855 chr3L 9970242 9970314 28 3460 52.0 59.5 55.8 0.5 3531 chr3L 9966783 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968548 5` UTR Nc + chr3L 9970314 exon Nc + chr3L_28_9965001 chr3L_9965001 RAL-301_125b 2507 chr3L 10003100 10003178 chr3L 10003247 10003307 41 145 7.0 6.5 6.8 5.3 207 chr3L 10003100 intron dpr6 + chr3L 10003204 intron dpr6 + chr3L 10003307 intron dpr6 + chr3L_41_10000001 chr3L_10000001 RAL-301_125b 2508 chr3L 10007140 10007206 chr3L 10007292 10007359 28 153 4.0 6.0 5.0 4.7 219 chr3L 10007140 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007359 intron dpr6 + chr3L_28_10005001 chr3L_10005001 RAL-301_125b 2509 chr3L 10019402 10019434 chr3L 10019546 10019578 21 141 10.5 13.0 11.8 1.6 176 chr3L 10019402 intron dpr6 + chr3L 10019490 intron dpr6 + chr3L 10019578 intron dpr6 + chr3L_21_10015001 chr3L_10015001 RAL-301_125b 2510 chr3L 10032496 10032567 chr3L 10032632 10032704 12 136 0.0 7.5 3.8 2.5 208 chr3L 10032496 intron dpr6 + chr3L 10032600 intron dpr6 + chr3L 10032704 intron dpr6 + chr3L_12_10030001 chr3L_10030001 RAL-301_125b 2511 chr3L 10049500 10049570 chr3L 10049630 10049700 23 129 8.5 4.5 6.5 3.1 200 chr3L 10049500 intron dpr6 + chr3L 10049600 intron dpr6 + chr3L 10049700 intron dpr6 + chr3L_23_10045001 chr3L_10045001 RAL-301_125b 2512 chr3L 10060082 10060117 chr3L 10067711 10067746 17.6 20 7629 13.0 16.0 14.5 1.3 7664 chr3L 10060082 intron dpr6 + chr3L 10063914 intron dpr6 + chr3L 10067746 intron dpr6 + chr3L_20_10060001 chr3L_10060001 RAL-301_125b 2513 chr3L 10082520 10082581 chr3L 10082652 10082713 12 131 1.0 8.0 4.5 2.2 193 chr3L 10082520 intron dpr6 + chr3L 10082616 intron dpr6 + chr3L 10082713 intron dpr6 + chr3L_12_10080001 chr3L_10080001 RAL-301_125b 2514 chr3L 10116142 10116180 chr3L 10116269 10116307 6 125 0.5 9.0 4.8 1.0 165 chr3L 10116142 intron dpr6 + chr3L 10116224 intron dpr6 + chr3L 10116307 intron dpr6 + chr3L_6_10115001 chr3L_10115001 RAL-301_125b 2515 chr3L 10186629 10186638 chr3L 10186768 10186777 6 139 20.5 0.0 10.2 0.5 148 chr3L 10186629 intergenic not near genes chr3L 10186703 intergenic not near genes chr3L 10186777 intergenic not near genes chr3L_6_10185001 chr3L_10185001 RAL-301_125b 2516 chr3L 10258887 10258953 chr3L 10259104 10259162 28 215 4.0 7.0 5.5 4.3 275 chr3L 10258887 intergenic not near genes chr3L 10259024 intergenic not near genes chr3L 10259162 intergenic not near genes chr3L_28_10255001 chr3L_10255001 RAL-301_125b 2517 chr3L 10279274 10279300 chr3L 10279409 10279415 15 133 6.0 19.5 12.8 1.1 141 chr3L 10279274 intergenic not near genes chr3L 10279344 intergenic not near genes chr3L 10279415 intergenic not near genes chr3L_15_10275001 chr3L_10275001 RAL-301_125b 2518 chr3L 10298623 10298689 chr3L 10298755 10298826 16 136 0.0 5.0 2.5 4.6 203 chr3L 10298623 intergenic not near genes chr3L 10298724 intergenic not near genes chr3L 10298826 intergenic not near genes chr3L_16_10295001 chr3L_10295001 RAL-301_125b 2519 chr3L 10300003 10300073 chr3L 10300145 10300215 15 141 2.5 8.5 5.5 2.3 212 chr3L 10300003 intergenic not near genes chr3L 10300109 intergenic not near genes chr3L 10300215 intergenic not near genes chr3L_15_10300001 chr3L_10300001 RAL-301_125b 2520 chr3L 10308700 10308743 chr3L 10308827 10308870 17 125 9.0 14.5 11.8 1.3 170 chr3L 10308700 intergenic not near genes chr3L 10308785 intergenic not near genes chr3L 10308870 intergenic not near genes chr3L_17_10305001 chr3L_10305001 RAL-301_125b 2521 chr3L 10414900 10414908 chr3L 10417322 10417330 Doc 4 2422 18.5 9.0 13.8 0.3 2430 chr3L 10414900 intergenic CG12362 + chr3L 10416115 intergenic not near genes chr3L 10417330 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-301_125b 2522 chr3L 10414910 10414969 chr3L 10417321 10417381 Doc 27 2420 6.0 9.0 7.5 3.2 2471 chr3L 10414910 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417381 intergenic not near genes chr3L_27_10415001 chr3L_10415001 RAL-301_125b 2523 chr3L 10449725 10449736 chr3L 10449908 10449919 9 182 14.0 12.5 13.2 0.6 194 chr3L 10449725 intergenic not near genes chr3L 10449822 intergenic not near genes chr3L 10449919 intergenic not near genes chr3L_9_10445001 chr3L_10445001 RAL-301_125b 2524 chr3L 10449739 10449784 chr3L 10449905 10449967 16 181 7.0 10.5 8.8 1.6 228 chr3L 10449739 intergenic not near genes chr3L 10449853 intergenic not near genes chr3L 10449967 intergenic not near genes chr3L_16_10445001 chr3L_10445001 RAL-301_125b 2525 chr3L 10481189 10481240 chr3L 10481318 10481369 23 129 4.0 11.5 7.8 2.6 180 chr3L 10481189 intergenic A2bp1 + chr3L 10481279 intergenic A2bp1 + chr3L 10481369 intergenic A2bp1 + chr3L_23_10480001 chr3L_10480001 RAL-301_125b 2526 chr3L 10526586 10526647 chr3L 10526717 10526722 4 114 8.0 8.0 8.0 0.4 136 chr3L 10526586 intron A2bp1 + chr3L 10526654 intron A2bp1 + chr3L 10526722 intron A2bp1 + chr3L_4_10525001 chr3L_10525001 RAL-301_125b 2527 chr3L 10528570 10528632 chr3L 10528708 10528770 22 137 7.0 5.0 6.0 3.1 200 chr3L 10528570 intron A2bp1 + chr3L 10528670 intron A2bp1 + chr3L 10528770 intron A2bp1 + chr3L_22_10525001 chr3L_10525001 RAL-301_125b 2528 chr3L 10551408 10551484 chr3L 10551546 10551621 27 137 1.5 7.0 4.2 5.2 213 chr3L 10551408 intron A2bp1 + chr3L 10551514 intron A2bp1 + chr3L 10551621 intron A2bp1 + chr3L_27_10550001 chr3L_10550001 RAL-301_125b 2529 chr3L 10584229 10584299 chr3L 10584366 10584436 29 137 5.5 7.5 6.5 3.9 207 chr3L 10584229 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584436 intron A2bp1 + chr3L_29_10580001 chr3L_10580001 RAL-301_125b 2530 chr3L 10600405 10600477 chr3L 10600537 10600609 26 131 7.0 3.0 5.0 4.3 204 chr3L 10600405 intergenic not near genes chr3L 10600507 intergenic not near genes chr3L 10600609 intergenic not near genes chr3L_26_10600001 chr3L_10600001 RAL-301_125b 2531 chr3L 10614751 10614797 chr3L 10614888 10614926 11 130 0.0 15.5 7.8 1.2 175 chr3L 10614751 intergenic not near genes chr3L 10614838 intergenic not near genes chr3L 10614926 intergenic not near genes chr3L_11_10610001 chr3L_10610001 RAL-301_125b 2532 chr3L 10620199 10620228 chr3L 10620325 10620354 6 126 8.0 4.5 6.2 0.8 155 chr3L 10620199 intergenic not near genes chr3L 10620276 intergenic not near genes chr3L 10620354 intergenic not near genes chr3L_6_10620001 chr3L_10620001 RAL-301_125b 2533 chr3L 10621823 10621863 chr3L 10621960 10622000 15 137 6.5 16.0 11.2 1.2 177 chr3L 10621823 intergenic not near genes chr3L 10621912 intergenic not near genes chr3L 10622000 intergenic not near genes chr3L_15_10620001 chr3L_10620001 RAL-301_125b 2534 chr3L 10681471 10681496 chr3L 10681609 10681634 12 138 19.0 0.0 9.5 1.1 163 chr3L 10681471 intron simj + chr3L 10681552 intron simj + chr3L 10681634 intron simj + chr3L_12_10680001 chr3L_10680001 RAL-301_125b 2535 chr3L 10721393 10721417 chr3L 10721546 10721570 13 153 11.0 18.5 14.8 0.8 177 chr3L 10721393 intergenic not near genes chr3L 10721482 intergenic not near genes chr3L 10721570 intergenic not near genes chr3L_13_10720001 chr3L_10720001 RAL-301_125b 2536 chr3L 10721954 10721982 chr3L 10722086 10722114 11 132 16.5 0.0 8.2 1.2 160 chr3L 10721954 intergenic not near genes chr3L 10722034 intergenic not near genes chr3L 10722114 intergenic not near genes chr3L_11_10720001 chr3L_10720001 RAL-301_125b 2537 chr3L 10739760 10739777 chr3L 10739894 10739911 7 134 14.0 0.0 7.0 0.9 151 chr3L 10739760 intergenic not near genes chr3L 10739836 intergenic not near genes chr3L 10739911 intergenic not near genes chr3L_7_10735001 chr3L_10735001 RAL-301_125b 2538 chr3L 10743490 10743509 chr3L 10743619 10743638 13 129 0.0 12.5 6.2 1.8 148 chr3L 10743490 intergenic not near genes chr3L 10743564 intergenic not near genes chr3L 10743638 intergenic not near genes chr3L_13_10740001 chr3L_10740001 RAL-301_125b 2539 chr3L 10762786 10762859 chr3L 10762915 10762967 19 123 7.5 8.5 8.0 2.1 181 chr3L 10762786 intergenic not near genes chr3L 10762876 intergenic not near genes chr3L 10762967 intergenic not near genes chr3L_19_10760001 chr3L_10760001 RAL-301_125b 2540 chr3L 10778774 10778826 chr3L 10778900 10778953 7 125 0.5 10.5 5.5 1.1 179 chr3L 10778774 intergenic not near genes chr3L 10778864 intergenic not near genes chr3L 10778953 intergenic not near genes chr3L_7_10775001 chr3L_10775001 RAL-301_125b 2541 chr3L 10820462 10820524 chr3L 10820661 10820723 11 199 6.0 7.5 6.8 1.4 261 chr3L 10820462 intergenic not near genes chr3L 10820592 intergenic not near genes chr3L 10820723 intergenic not near genes chr3L_11_10820001 chr3L_10820001 RAL-301_125b 2542 chr3L 10907961 10907992 chr3L 10908087 10908118 4 126 4.5 1.0 2.8 1.1 157 chr3L 10907961 intergenic not near genes chr3L 10908040 intergenic not near genes chr3L 10908118 intergenic not near genes chr3L_4_10905001 chr3L_10905001 RAL-301_125b 2543 chr3L 10947462 10947478 chr3L 10947588 10947604 7 126 0.0 3.0 1.5 2.8 142 chr3L 10947462 intergenic not near genes chr3L 10947533 intergenic not near genes chr3L 10947604 intergenic not near genes chr3L_7_10945001 chr3L_10945001 RAL-301_125b 2544 chr3L 10951250 10951294 chr3L 10951376 10951420 11 126 0.0 6.5 3.2 2.6 170 chr3L 10951250 intergenic not near genes chr3L 10951335 intergenic not near genes chr3L 10951420 intergenic not near genes chr3L_11_10950001 chr3L_10950001 RAL-301_125b 2545 chr3L 10956399 10956468 chr3L 10956567 10956636 28 167 5.5 7.0 6.2 3.9 237 chr3L 10956399 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956636 intergenic not near genes chr3L_28_10955001 chr3L_10955001 RAL-301_125b 2546 chr3L 10956956 10957030 chr3L 10957082 10957156 27 126 13.5 9.5 11.5 2.2 200 chr3L 10956956 intergenic not near genes chr3L 10957056 intergenic not near genes chr3L 10957156 intergenic not near genes chr3L_27_10955001 chr3L_10955001 RAL-301_125b 2547 chr3L 10958160 10958232 chr3L 10958292 10958350 16 131 7.5 0.5 4.0 3.2 190 chr3L 10958160 intergenic not near genes chr3L 10958255 intergenic not near genes chr3L 10958350 intergenic not near genes chr3L_16_10955001 chr3L_10955001 RAL-301_125b 2548 chr3L 11018513 11018569 chr3L 11018649 11018705 28 136 5.5 17.5 11.5 2.2 192 chr3L 11018513 intergenic not near genes chr3L 11018609 intergenic not near genes chr3L 11018705 intergenic not near genes chr3L_28_11015001 chr3L_11015001 RAL-301_125b 2549 chr3L 11053617 11053645 chr3L 11053757 11053759 17 138 13.0 0.0 6.5 2.3 142 chr3L 11053617 intergenic CG7888 + chr3L 11053688 intergenic CG7888 + chr3L 11053759 intergenic CG7888 + chr3L_17_11050001 chr3L_11050001 RAL-301_125b 2550 chr3L 11087009 11087087 chr3L 11088847 11088926 S-element 23 1837 7.5 6.5 7.0 2.9 1917 chr3L 11087009 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088926 intron JIL-1 - chr3L_23_11085001 chr3L_11085001 RAL-301_125b 2551 chr3L 11131757 11131777 chr3L 11132071 11132091 8 314 20.5 1.5 11.0 0.7 334 chr3L 11131757 intron CG42575 + chr3L 11131924 intron,3` UTR CG42575 +,CG32074 - chr3L 11132091 intron,exon CG42575 +,CG32074 - chr3L_8_11130001 chr3L_11130001 RAL-301_125b 2552 chr3L 11145534 11145552 chr3L 11145672 11145690 10 138 0.0 9.5 4.8 1.7 156 chr3L 11145534 intron CG32082 + chr3L 11145612 intron CG32082 + chr3L 11145690 intron CG32082 + chr3L_10_11145001 chr3L_11145001 RAL-301_125b 2553 chr3L 11180628 11180658 chr3L 11180786 11180816 11 158 6.5 16.0 11.2 0.9 188 chr3L 11180628 intron GlcAT-P - chr3L 11180722 intron GlcAT-P - chr3L 11180816 intron GlcAT-P - chr3L_11_11180001 chr3L_11180001 RAL-301_125b 2554 chr3L 11217460 11217536 chr3L 11217593 11217668 24 132 12.0 0.0 6.0 3.4 208 chr3L 11217460 intron CG42671 + chr3L 11217564 intron CG42671 + chr3L 11217668 intron CG42671 + chr3L_24_11215001 chr3L_11215001 RAL-301_125b 2555 chr3L 11241732 11241793 chr3L 11241864 11241925 21 132 5.5 10.5 8.0 2.3 193 chr3L 11241732 intergenic not near genes chr3L 11241828 intergenic not near genes chr3L 11241925 intergenic not near genes chr3L_21_11240001 chr3L_11240001 RAL-301_125b 2556 chr3L 11242464 11242487 chr3L 11242639 11242662 9 175 18.0 22.5 20.2 0.4 198 chr3L 11242464 intergenic not near genes chr3L 11242563 intergenic not near genes chr3L 11242662 intergenic not near genes chr3L_9_11240001 chr3L_11240001 RAL-301_125b 2557 chr3L 11264429 11264451 chr3L 11271422 11271453 17.6 11 7001 15.5 10.5 13.0 0.8 7024 chr3L 11264429 intergenic not near genes chr3L 11267941 intergenic not near genes chr3L 11271453 intergenic not near genes chr3L_11_11265001 chr3L_11265001 RAL-301_125b 2558 chr3L 11264453 11264485 chr3L 11271421 11271487 17.6 14 6997 8.5 10.5 9.5 1.3 7034 chr3L 11264453 intergenic not near genes chr3L 11267970 intergenic not near genes chr3L 11271487 intergenic not near genes chr3L_14_11265001 chr3L_11265001 RAL-301_125b 2559 chr3L 11337870 11337878 chr3L 11338004 11338012 8 134 9.5 12.0 10.8 0.7 142 chr3L 11337870 intergenic not near genes chr3L 11337941 intergenic not near genes chr3L 11338012 intergenic not near genes chr3L_8_11335001 chr3L_11335001 RAL-301_125b 2560 chr3L 11337881 11337892 chr3L 11338002 11338026 4 127 7.0 11.0 9.0 0.4 145 chr3L 11337881 intergenic not near genes chr3L 11337954 intergenic not near genes chr3L 11338026 intergenic not near genes chr3L_4_11335001 chr3L_11335001 RAL-301_125b 2561 chr3L 11396568 11396613 chr3L 11396705 11396750 21 137 11.0 0.0 5.5 3.2 182 chr3L 11396568 intergenic not near genes chr3L 11396659 intergenic not near genes chr3L 11396750 intergenic not near genes chr3L_21_11395001 chr3L_11395001 RAL-301_125b 2562 chr3L 11441351 11441372 chr3L 11441480 11441501 11 129 0.0 13.0 6.5 1.5 150 chr3L 11441351 intergenic not near genes chr3L 11441426 intergenic not near genes chr3L 11441501 intergenic not near genes chr3L_11_11440001 chr3L_11440001 RAL-301_125b 2563 chr3L 11442734 11442752 chr3L 11442871 11442879 4 134 17.5 0.0 8.8 0.4 145 chr3L 11442734 intergenic not near genes chr3L 11442806 intergenic not near genes chr3L 11442879 intergenic not near genes chr3L_4_11440001 chr3L_11440001 RAL-301_125b 2564 chr3L 11538362 11538431 chr3L 11539249 11539262 9 870 0.0 1.5 0.8 5.0 900 chr3L 11538362 intron Mob2 - chr3L 11538812 intron Mob2 - chr3L 11539262 intron Mob2 - chr3L_9_11535001 chr3L_11535001 RAL-301_125b 2565 chr3L 11579506 11579584 chr3L 11579662 11579740 33 156 6.5 8.5 7.5 3.9 234 chr3L 11579506 intergenic CG43390 - chr3L 11579623 intergenic CG43390 - chr3L 11579740 intergenic CG43390 - chr3L_33_11575001 chr3L_11575001 RAL-301_125b 2566 chr3L 11587869 11587946 chr3L 11587995 11588072 23 125 5.5 6.0 5.8 3.4 203 chr3L 11587869 intergenic rt - chr3L 11587970 intergenic rt - chr3L 11588072 intergenic rt - chr3L_23_11585001 chr3L_11585001 RAL-301_125b 2567 chr3L 11588681 11588756 chr3L 11588887 11588962 42 204 2.5 9.0 5.8 6.2 281 chr3L 11588681 intergenic not near genes chr3L 11588822 intergenic not near genes chr3L 11588962 intergenic not near genes chr3L_42_11585001 chr3L_11585001 RAL-301_125b 2568 chr3L 11678046 11678119 chr3L 11678183 11678256 36 137 6.0 6.5 6.2 5.0 210 chr3L 11678046 intron CG32085 - chr3L 11678151 intron CG32085 - chr3L 11678256 intron CG32085 - chr3L_36_11675001 chr3L_11675001 RAL-301_125b 2569 chr3L 11723046 11723105 chr3L 11727891 11727950 Doc 32 4845 12.0 16.5 14.2 2.1 4904 chr3L 11723046 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727950 3` UTR Bmcp + chr3L_32_11725001 chr3L_11725001 RAL-301_125b 2570 chr3L 11729631 11729702 chr3L 11729757 11729828 33 125 8.5 15.0 11.8 2.6 197 chr3L 11729631 exon CG32088 + chr3L 11729730 intron CG32088 + chr3L 11729828 exon CG32088 + chr3L_33_11725001 chr3L_11725001 RAL-301_125b 2571 chr3L 11743973 11744044 chr3L 11744131 11744202 23 158 5.0 3.0 4.0 4.6 229 chr3L 11743973 exon CG6024 - chr3L 11744088 intron CG6024 - chr3L 11744202 intron CG6024 - chr3L_23_11740001 chr3L_11740001 RAL-301_125b 2572 chr3L 11746618 11746683 chr3L 11746747 11746812 18 129 0.0 7.0 3.5 4.0 194 chr3L 11746618 intron CG6024 - chr3L 11746715 intron CG6024 - chr3L 11746812 intron CG6024 - chr3L_18_11745001 chr3L_11745001 RAL-301_125b 2573 chr3L 11757880 11757910 chr3L 11758017 11758046 7 143 14.5 0.0 7.2 0.9 166 chr3L 11757880 intron CG6024 - chr3L 11757963 intron CG6024 - chr3L 11758046 intron CG6024 - chr3L_7_11755001 chr3L_11755001 RAL-301_125b 2574 chr3L 7749471 7749471 chr3L 11777678 11777678 4 4028207 21.5 28.5 25.0 0.2 4028207 chr3L 7749471 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_9760001 chr3L_9760001 RAL-301_125b 2575 chr3L 9313026 9313027 chr3L 11777678 11777678 5 2464651 20.5 28.5 24.5 0.2 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_10545001 chr3L_10545001 RAL-301_125b 2576 chr3L 11810538 11810554 chr3L 11810656 11810682 8 124 4.5 18.5 11.5 0.6 144 chr3L 11810538 intron CG42255 - chr3L 11810610 intron CG42255 - chr3L 11810682 exon CG42255 - chr3L_8_11810001 chr3L_11810001 RAL-301_125b 2577 chr3L 11816762 11816806 chr3L 11816913 11816957 25 151 13.5 15.5 14.5 1.6 195 chr3L 11816762 3` UTR CG5946 - chr3L 11816860 3` UTR CG5946 - chr3L 11816957 3` UTR CG5946 - chr3L_25_11815001 chr3L_11815001 RAL-301_125b 2578 chr3L 11824465 11824541 chr3L 11824903 11824964 19 427 8.5 5.0 6.8 2.4 499 chr3L 11824465 exon CG32095 - chr3L 11824714 exon CG32095 - chr3L 11824964 exon CG32095 - chr3L_19_11820001 chr3L_11820001 RAL-301_125b 2579 chr3L 11833677 11833697 chr3L 11833825 11833851 12 154 20.0 8.5 14.2 0.8 174 chr3L 11833677 intergenic CycA - chr3L 11833764 intergenic CycA - chr3L 11833851 intergenic CycA - chr3L_12_11830001 chr3L_11830001 RAL-301_125b 2580 chr3L 11864506 11864576 chr3L 11865851 11865921 pogo 33 1345 11.0 9.0 10.0 3.0 1415 chr3L 11864506 intron CG44837 - chr3L 11865214 intron CG44837 - chr3L 11865921 intron CG44837 - chr3L_33_11865001 chr3L_11865001 RAL-301_125b 2581 chr3L 11887208 11887269 chr3L 11887355 11887416 24 146 10.0 0.5 5.2 3.9 208 chr3L 11887208 intron CG44837 - chr3L 11887312 intron,3` UTR CG44837 -,CG5897 - chr3L 11887416 intron,3` UTR CG44837 -,CG5897 - chr3L_24_11885001 chr3L_11885001 RAL-301_125b 2582 chr3L 11905069 11905143 chr3L 11905201 11905275 33 130 2.5 6.5 4.5 6.0 206 chr3L 11905069 intron CG44837 - chr3L 11905172 intron CG44837 - chr3L 11905275 intron CG44837 - chr3L_33_11905001 chr3L_11905001 RAL-301_125b 2583 chr3L 11938831 11938874 chr3L 11938958 11938971 15 128 16.0 7.5 11.8 1.2 140 chr3L 11938831 5` UTR CG44837 - chr3L 11938901 intergenic CG44837 - chr3L 11938971 intergenic CG44837 - chr3L_15_11935001 chr3L_11935001 RAL-301_125b 2584 chr3L 11938882 11938902 chr3L 11938956 11939008 5 117 8.5 7.0 7.8 0.6 126 chr3L 11938882 intergenic CG44837 - chr3L 11938945 intergenic CG44837 - chr3L 11939008 intergenic CG44837 - chr3L_5_11935001 chr3L_11935001 RAL-301_125b 2585 chr3L 11943444 11943519 chr3L 11943595 11943670 41 151 6.5 5.0 5.8 6.0 226 chr3L 11943444 3` UTR Rpt4R + chr3L 11943557 intergenic Rpt4R +,CG5883 - chr3L 11943670 3` UTR CG5883 - chr3L_41_11940001 chr3L_11940001 RAL-301_125b 2586 chr3L 11961174 11961211 chr3L 11961303 11961365 12 142 8.5 7.5 8.0 1.3 191 chr3L 11961174 exon prc - chr3L 11961270 exon prc - chr3L 11961365 exon prc - chr3L_12_11960001 chr3L_11960001 RAL-301_125b 2587 chr3L 11984525 11984594 chr3L 11984666 11984736 19 142 11.0 6.0 8.5 2.0 211 chr3L 11984525 intergenic CG6938 + chr3L 11984630 intergenic CG6938 + chr3L 11984736 intergenic CG6938 + chr3L_19_11980001 chr3L_11980001 RAL-301_125b 2588 chr3L 12075383 12075460 chr3L 12075522 12075594 25 136 5.5 9.0 7.2 3.0 211 chr3L 12075383 intron Sema-5c - chr3L 12075488 intron Sema-5c - chr3L 12075594 intron Sema-5c - chr3L_25_12075001 chr3L_12075001 RAL-301_125b 2589 chr3L 12103870 12103914 chr3L 12103996 12104040 27 126 10.5 7.5 9.0 2.7 170 chr3L 12103870 intergenic not near genes chr3L 12103955 intergenic not near genes chr3L 12104040 intergenic not near genes chr3L_27_12100001 chr3L_12100001 RAL-301_125b 2590 chr3L 12105932 12105998 chr3L 12106069 12106136 24 136 11.0 17.5 14.2 1.6 204 chr3L 12105932 intergenic not near genes chr3L 12106034 intergenic not near genes chr3L 12106136 intergenic not near genes chr3L_24_12105001 chr3L_12105001 RAL-301_125b 2591 chr3L 12108449 12108478 chr3L 12108585 12108604 11 135 10.5 0.0 5.2 1.8 155 chr3L 12108449 intergenic not near genes chr3L 12108526 intergenic not near genes chr3L 12108604 intergenic not near genes chr3L_11_12105001 chr3L_12105001 RAL-301_125b 2592 chr3L 12170690 12170769 chr3L 12171089 12171162 28 394 6.0 9.0 7.5 3.3 472 chr3L 12170690 intron Rh7 - chr3L 12170926 intron Rh7 - chr3L 12171162 intron Rh7 - chr3L_28_12170001 chr3L_12170001 RAL-301_125b 2593 chr3L 12186364 12186398 chr3L 12186530 12186564 15 166 7.5 7.5 7.5 1.8 200 chr3L 12186364 intron CG6910 + chr3L 12186464 intron CG6910 + chr3L 12186564 exon CG6910 + chr3L_15_12185001 chr3L_12185001 RAL-301_125b 2594 chr3L 12208190 12208252 chr3L 12208318 12208374 26 126 9.5 11.0 10.2 2.3 184 chr3L 12208190 intron app - chr3L 12208282 intron app - chr3L 12208374 intron app - chr3L_26_12205001 chr3L_12205001 RAL-301_125b 2595 chr3L 12235812 12235876 chr3L 12235936 12236016 24 137 0.0 5.0 2.5 6.9 204 chr3L 12235812 intron app - chr3L 12235914 intron app - chr3L 12236016 intron app - chr3L_24_12235001 chr3L_12235001 RAL-301_125b 2596 chr3L 12251621 12251631 chr3L 12251747 12251757 6 126 5.0 28.0 16.5 0.3 136 chr3L 12251621 intron app - chr3L 12251689 intron app - chr3L 12251757 intron app - chr3L_6_12250001 chr3L_12250001 RAL-301_125b 2597 chr3L 12261191 12261201 chr3L 12261337 12261341 7 149 12.5 21.5 17.0 0.4 150 chr3L 12261191 intron app - chr3L 12261266 intron app - chr3L 12261341 intron app - chr3L_7_12260001 chr3L_12260001 RAL-301_125b 2598 chr3L 12261202 12261209 chr3L 12261284 12261355 5 134 9.5 8.0 8.8 0.5 153 chr3L 12261202 intron app - chr3L 12261278 intron app - chr3L 12261355 intron app - chr3L_5_12260001 chr3L_12260001 RAL-301_125b 2599 chr3L 12273084 12273132 chr3L 12273440 12273488 24 355 5.0 15.5 10.2 2.1 404 chr3L 12273084 intron CG4300 - chr3L 12273286 intron CG4300 - chr3L 12273488 intron CG4300 - chr3L_24_12270001 chr3L_12270001 RAL-301_125b 2600 chr3L 12301992 12301995 chr3L 12302126 12302129 4 134 0.0 16.0 8.0 0.4 137 chr3L 12301992 intergenic CR44550 +,CR44551 - chr3L 12302060 intergenic CR44551 -,CR44550 + chr3L 12302129 intergenic CR44551 -,CR44550 + chr3L_4_12300001 chr3L_12300001 RAL-301_125b 2601 chr3L 12335338 12335416 chr3L 12335463 12335520 37 112 10.5 11.0 10.8 3.1 182 chr3L 12335338 exon CG32105 + chr3L 12335429 3` UTR CG32105 + chr3L 12335520 3` UTR CG32105 + chr3L_37_12335001 chr3L_12335001 RAL-301_125b 2602 chr3L 12369486 12369560 chr3L 12369626 12369700 23 139 10.5 7.5 9.0 2.3 214 chr3L 12369486 intron Ncc69 - chr3L 12369593 intron Ncc69 - chr3L 12369700 intron Ncc69 - chr3L_23_12365001 chr3L_12365001 RAL-301_125b 2603 chr3L 12381491 12381553 chr3L 12381619 12381681 11 124 4.5 6.0 5.2 1.8 190 chr3L 12381491 intron Ncc69 - chr3L 12381586 intron Ncc69 - chr3L 12381681 intron Ncc69 - chr3L_11_12380001 chr3L_12380001 RAL-301_125b 2604 chr3L 12412874 12412924 chr3L 12413006 12413056 24 132 5.0 12.0 8.5 2.5 182 chr3L 12412874 intron CG32103 - chr3L 12412965 intron CG32103 - chr3L 12413056 intron CG32103 - chr3L_24_12410001 chr3L_12410001 RAL-301_125b 2605 chr3L 12446221 12446300 chr3L 12446349 12446363 33 111 6.5 7.0 6.8 4.2 142 chr3L 12446221 intergenic not near genes chr3L 12446292 intergenic not near genes chr3L 12446363 intergenic not near genes chr3L_33_12445001 chr3L_12445001 RAL-301_125b 2606 chr3L 12458485 12458506 chr3L 12458634 12458655 10 149 6.0 19.5 12.8 0.7 170 chr3L 12458485 intergenic not near genes chr3L 12458570 intergenic not near genes chr3L 12458655 intergenic not near genes chr3L_10_12455001 chr3L_12455001 RAL-301_125b 2607 chr3L 12488368 12488441 chr3L 12488545 12488618 22 176 9.5 6.5 8.0 2.4 250 chr3L 12488368 intron CG10660 - chr3L 12488493 intron CG10660 - chr3L 12488618 exon CG10660 - chr3L_22_12485001 chr3L_12485001 RAL-301_125b 2608 chr3L 12491706 12491735 chr3L 12491829 12491868 8 132 0.5 17.0 8.8 0.8 162 chr3L 12491706 intergenic CG10657 -,CR45682 + chr3L 12491787 intergenic CG10657 -,CR45682 + chr3L 12491868 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_8_12490001 chr3L_12490001 RAL-301_125b 2609 chr3L 12565314 12565330 chr3L 12565478 12565479 6 159 20.5 6.5 13.5 0.4 165 chr3L 12565314 intron sowah - chr3L 12565396 intron sowah - chr3L 12565479 intron sowah - chr3L_6_12565001 chr3L_12565001 RAL-301_125b 2610 chr3L 12565332 12565387 chr3L 12565476 12565551 28 159 7.5 6.0 6.8 3.6 219 chr3L 12565332 intron sowah - chr3L 12565442 intron sowah - chr3L 12565551 intron sowah - chr3L_28_12565001 chr3L_12565001 RAL-301_125b 2611 chr3L 12578005 12578056 chr3L 12578137 12578194 13 137 8.5 0.0 4.2 2.5 189 chr3L 12578005 intergenic not near genes chr3L 12578100 intergenic not near genes chr3L 12578194 intergenic not near genes chr3L_13_12575001 chr3L_12575001 RAL-301_125b 2612 chr3L 12593541 12593589 chr3L 12593653 12593719 25 124 7.0 5.5 6.2 3.5 178 chr3L 12593541 intron ara + chr3L 12593630 intron ara + chr3L 12593719 intron ara + chr3L_25_12590001 chr3L_12590001 RAL-301_125b 2613 chr3L 12614546 12614564 chr3L 12614741 12614759 8 195 0.0 9.5 4.8 1.4 213 chr3L 12614546 intron caup + chr3L 12614652 intron caup + chr3L 12614759 intron caup + chr3L_8_12610001 chr3L_12610001 RAL-301_125b 2614 chr3L 12620956 12620982 chr3L 12621077 12621088 8 115 23.5 21.0 22.2 0.3 132 chr3L 12620956 3` UTR caup + chr3L 12621022 3` UTR caup + chr3L 12621088 3` UTR caup + chr3L_8_12620001 chr3L_12620001 RAL-301_125b 2615 chr3L 12626121 12626153 chr3L 12626280 12626312 17 158 6.0 8.0 7.0 2.1 191 chr3L 12626121 intergenic not near genes chr3L 12626216 intergenic not near genes chr3L 12626312 intergenic not near genes chr3L_17_12625001 chr3L_12625001 RAL-301_125b 2616 chr3L 12681649 12681714 chr3L 12682052 12682117 31 403 7.5 11.0 9.2 3.0 468 chr3L 12681649 intergenic not near genes chr3L 12681883 intergenic not near genes chr3L 12682117 intergenic not near genes chr3L_31_12680001 chr3L_12680001 RAL-301_125b 2617 chr3L 12727993 12728042 chr3L 12728127 12728176 17 134 8.0 12.0 10.0 1.5 183 chr3L 12727993 intergenic not near genes chr3L 12728084 intergenic not near genes chr3L 12728176 intergenic not near genes chr3L_17_12725001 chr3L_12725001 RAL-301_125b 2618 chr3L 12788368 12788442 chr3L 12788538 12788612 31 169 6.5 5.5 6.0 4.4 244 chr3L 12788368 exon Atg1 - chr3L 12788490 intron Atg1 - chr3L 12788612 exon Atg1 - chr3L_31_12785001 chr3L_12785001 RAL-301_125b 2619 chr3L 12801932 12802011 chr3L 12802058 12802137 28 126 13.5 5.5 9.5 2.7 205 chr3L 12801932 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802137 intron Atg1 - chr3L_28_12800001 chr3L_12800001 RAL-301_125b 2620 chr3L 12874878 12874950 chr3L 12877220 12877292 jockey 31 2342 6.0 10.0 8.0 3.4 2414 chr3L 12874878 intergenic not near genes chr3L 12876085 intergenic not near genes chr3L 12877292 intergenic not near genes chr3L_31_12875001 chr3L_12875001 RAL-301_125b 2621 chr3L 12883330 12883388 chr3L 12883451 12883524 26 135 10.0 8.0 9.0 2.6 194 chr3L 12883330 intergenic not near genes chr3L 12883427 intergenic not near genes chr3L 12883524 intergenic not near genes chr3L_26_12880001 chr3L_12880001 RAL-301_125b 2622 chr3L 12894756 12894812 chr3L 12894884 12894939 22 127 12.5 14.0 13.2 1.5 183 chr3L 12894756 3` UTR CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894939 intergenic CG14118 + chr3L_22_12890001 chr3L_12890001 RAL-301_125b 2623 chr3L 12896188 12896212 chr3L 12896316 12896325 8 124 15.5 8.0 11.8 0.6 137 chr3L 12896188 intergenic not near genes chr3L 12896256 intergenic not near genes chr3L 12896325 intergenic not near genes chr3L_8_12895001 chr3L_12895001 RAL-301_125b 2624 chr3L 12919235 12919263 chr3L 12924758 12924773 Rt1c 8 5521 16.0 12.0 14.0 0.5 5538 chr3L 12919235 intergenic not near genes chr3L 12922004 intergenic not near genes chr3L 12924773 intergenic not near genes chr3L_8_12920001 chr3L_12920001 RAL-301_125b 2625 chr3L 12926572 12926641 chr3L 12926701 12926770 32 129 9.5 7.5 8.5 3.4 198 chr3L 12926572 intergenic not near genes chr3L 12926671 intergenic not near genes chr3L 12926770 intergenic not near genes chr3L_32_12925001 chr3L_12925001 RAL-301_125b 2626 chr3L 12938881 12938936 chr3L 12939021 12939076 22 140 8.5 12.5 10.5 1.9 195 chr3L 12938881 intergenic not near genes chr3L 12938978 intergenic not near genes chr3L 12939076 intergenic not near genes chr3L_22_12935001 chr3L_12935001 RAL-301_125b 2627 chr3L 12957742 12957808 chr3L 12962274 12962335 copia 24 4532 8.5 6.5 7.5 2.8 4593 chr3L 12957742 intergenic not near genes chr3L 12960038 intergenic not near genes chr3L 12962335 intergenic not near genes chr3L_24_12960001 chr3L_12960001 RAL-301_125b 2628 chr3L 13032768 13032800 chr3L 13032899 13032931 8 131 0.0 8.5 4.2 1.5 163 chr3L 13032768 intron,intron CG17672 +,CR45157 - chr3L 13032850 intron,intron CG17672 +,CR45157 - chr3L 13032931 intron,3` UTR CG17672 +,CR45157 - chr3L_8_13030001 chr3L_13030001 RAL-301_125b 2629 chr3L 13085008 13085074 chr3L 13085137 13085203 19 127 5.0 6.0 5.5 2.9 195 chr3L 13085008 intergenic not near genes chr3L 13085106 intergenic not near genes chr3L 13085203 intergenic not near genes chr3L_19_13085001 chr3L_13085001 RAL-301_125b 2630 chr3L 13090850 13090908 chr3L 13090996 13091058 26 160 12.0 9.0 10.5 2.3 208 chr3L 13090850 intergenic not near genes chr3L 13090954 intergenic not near genes chr3L 13091058 intergenic not near genes chr3L_26_13090001 chr3L_13090001 RAL-301_125b 2631 chr3L 13095767 13095804 chr3L 13095905 13095942 22 138 19.5 0.0 9.8 2.0 175 chr3L 13095767 intergenic not near genes chr3L 13095854 intergenic not near genes chr3L 13095942 intergenic not near genes chr3L_22_13095001 chr3L_13095001 RAL-301_125b 2632 chr3L 13174216 13174271 chr3L 13174358 13174413 25 142 9.5 9.0 9.2 2.5 197 chr3L 13174216 intergenic snky + chr3L 13174314 intergenic snky + chr3L 13174413 intergenic snky + chr3L_25_13170001 chr3L_13170001 RAL-301_125b 2633 chr3L 13194027 13194082 chr3L 13194156 13194211 23 129 9.5 9.0 9.2 2.3 184 chr3L 13194027 intergenic not near genes chr3L 13194119 intergenic not near genes chr3L 13194211 intergenic not near genes chr3L_23_13190001 chr3L_13190001 RAL-301_125b 2634 chr3L 13197051 13197113 chr3L 13197225 13197280 11 173 2.5 6.0 4.2 2.1 229 chr3L 13197051 intergenic not near genes chr3L 13197166 intergenic not near genes chr3L 13197280 intergenic not near genes chr3L_11_13195001 chr3L_13195001 RAL-301_125b 2635 chr3L 13206187 13206261 chr3L 13206319 13206387 28 132 5.5 9.5 7.5 3.3 200 chr3L 13206187 intergenic not near genes chr3L 13206287 intergenic not near genes chr3L 13206387 intergenic not near genes chr3L_28_13205001 chr3L_13205001 RAL-301_125b 2636 chr3L 13223164 13223241 chr3L 13223291 13223368 15 120 11.0 9.5 10.2 1.3 204 chr3L 13223164 intergenic not near genes chr3L 13223266 intergenic not near genes chr3L 13223368 intergenic not near genes chr3L_15_13220001 chr3L_13220001 RAL-301_125b 2637 chr3L 13261765 13261831 chr3L 13261905 13261971 29 138 7.5 6.0 6.8 3.7 206 chr3L 13261765 intron caps + chr3L 13261868 intron caps + chr3L 13261971 intron caps + chr3L_29_13260001 chr3L_13260001 RAL-301_125b 2638 chr3L 13265137 13265212 chr3L 13265265 13265340 30 126 5.5 9.0 7.2 3.7 203 chr3L 13265137 intron caps + chr3L 13265238 5` UTR caps + chr3L 13265340 5` UTR caps + chr3L_30_13265001 chr3L_13265001 RAL-301_125b 2639 chr3L 13311753 13311817 chr3L 13311881 13311945 30 128 12.5 7.0 9.8 2.8 192 chr3L 13311753 intergenic not near genes chr3L 13311849 intergenic not near genes chr3L 13311945 intergenic not near genes chr3L_30_13310001 chr3L_13310001 RAL-301_125b 2640 chr3L 13337118 13337157 chr3L 13337259 13337298 16 141 4.5 7.0 5.8 2.4 180 chr3L 13337118 intergenic not near genes chr3L 13337208 intergenic not near genes chr3L 13337298 intergenic not near genes chr3L_16_13335001 chr3L_13335001 RAL-301_125b 2641 chr3L 13400478 13400546 chr3L 13400604 13400672 16 126 4.0 4.5 4.2 3.1 194 chr3L 13400478 intron sens - chr3L 13400575 intron sens - chr3L 13400672 intron sens - chr3L_16_13400001 chr3L_13400001 RAL-301_125b 2642 chr3L 13477003 13477037 chr3L 13477130 13477164 26 127 0.5 17.0 8.8 2.7 161 chr3L 13477003 intergenic not near genes chr3L 13477084 intergenic stv + chr3L 13477164 intergenic stv + chr3L_26_13475001 chr3L_13475001 RAL-301_125b 2643 chr3L 13525114 13525144 chr3L 13532960 13532990 roo 21 7845 18.5 7.0 12.8 1.5 7876 chr3L 13525114 intergenic not near genes chr3L 13529052 intergenic not near genes chr3L 13532990 intergenic not near genes chr3L_21_13525001 chr3L_13525001 RAL-301_125b 2644 chr3L 13525145 13525179 chr3L 13532991 13533025 roo 18 7846 11.5 18.0 14.8 1.1 7880 chr3L 13525145 intergenic not near genes chr3L 13529085 intergenic not near genes chr3L 13533025 intergenic not near genes chr3L_18_13525001 chr3L_13525001 RAL-301_125b 2645 chr3L 13535886 13535902 chr3L 13536008 13536028 5 125 11.5 8.0 9.8 0.5 142 chr3L 13535886 intergenic not near genes chr3L 13535957 intergenic not near genes chr3L 13536028 intergenic not near genes chr3L_5_13535001 chr3L_13535001 RAL-301_125b 2646 chr3L 13535904 13535930 chr3L 13536006 13536056 11 124 9.0 8.0 8.5 1.2 152 chr3L 13535904 intergenic not near genes chr3L 13535980 intergenic not near genes chr3L 13536056 intergenic not near genes chr3L_11_13535001 chr3L_13535001 RAL-301_125b 2647 chr3L 13574585 13574618 chr3L 13580145 13580179 Rt1c 10 5560 12.5 9.0 10.8 0.8 5594 chr3L 13574585 intron bru-3 - chr3L 13577382 intron bru-3 - chr3L 13580179 intron bru-3 - chr3L_10_13575001 chr3L_13575001 RAL-301_125b 2648 chr3L 13629484 13629543 chr3L 13629645 13629696 23 160 9.5 12.5 11.0 1.9 212 chr3L 13629484 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629696 intron bru-3 - chr3L_23_13625001 chr3L_13625001 RAL-301_125b 2649 chr3L 13677484 13677556 chr3L 13677611 13677683 21 127 7.0 2.0 4.5 3.8 199 chr3L 13677484 intron bru-3 - chr3L 13677584 intron bru-3 - chr3L 13677683 intron bru-3 - chr3L_21_13675001 chr3L_13675001 RAL-301_125b 2650 chr3L 13692108 13692156 chr3L 13692247 13692294 12 138 3.5 8.5 6.0 1.7 186 chr3L 13692108 intron bru-3 - chr3L 13692201 intron bru-3 - chr3L 13692294 intron bru-3 - chr3L_12_13690001 chr3L_13690001 RAL-301_125b 2651 chr3L 13692557 13692610 chr3L 13692684 13692737 16 127 7.0 10.5 8.8 1.6 180 chr3L 13692557 intron bru-3 - chr3L 13692647 intron bru-3 - chr3L 13692737 intron bru-3 - chr3L_16_13690001 chr3L_13690001 RAL-301_125b 2652 chr3L 13722402 13722470 chr3L 13722530 13722598 24 125 8.0 10.5 9.2 2.4 196 chr3L 13722402 intron bru-3 - chr3L 13722500 intron bru-3 - chr3L 13722598 intron bru-3 - chr3L_24_13720001 chr3L_13720001 RAL-301_125b 2653 chr3L 13739981 13740049 chr3L 13740124 13740191 23 140 6.0 8.0 7.0 2.9 210 chr3L 13739981 intron bru-3 - chr3L 13740086 intron bru-3 - chr3L 13740191 intron bru-3 - chr3L_23_13740001 chr3L_13740001 RAL-301_125b 2654 chr3L 13752739 13752761 chr3L 13752885 13752908 4 146 16.0 8.5 12.2 0.3 169 chr3L 13752739 intron bru-3 - chr3L 13752824 intron bru-3 - chr3L 13752908 intron bru-3 - chr3L_4_13750001 chr3L_13750001 RAL-301_125b 2655 chr3L 13752769 13752808 chr3L 13752881 13752923 14 134 7.0 8.0 7.5 1.6 154 chr3L 13752769 intron bru-3 - chr3L 13752846 intron bru-3 - chr3L 13752923 intron bru-3 - chr3L_14_13750001 chr3L_13750001 RAL-301_125b 2656 chr3L 13766855 13766919 chr3L 13767003 13767067 30 147 5.5 4.0 4.8 5.2 212 chr3L 13766855 intron bru-3 - chr3L 13766961 intron bru-3 - chr3L 13767067 intron bru-3 - chr3L_30_13765001 chr3L_13765001 RAL-301_125b 2657 chr3L 13804503 13804563 chr3L 13822839 13822899 roo 32 18336 8.0 10.0 9.0 3.2 18396 chr3L 13804503 intergenic not near genes chr3L 13813701 intergenic not near genes chr3L 13822899 intergenic not near genes chr3L_32_13810001 chr3L_13810001 RAL-301_125b 2658 chr3L 13862422 13862500 chr3L 13862679 13862745 24 254 7.0 9.5 8.2 2.6 323 chr3L 13862422 intron CG8745 - chr3L 13862584 intron CG8745 - chr3L 13862745 intron CG8745 - chr3L_24_13860001 chr3L_13860001 RAL-301_125b 2659 chr3L 13868117 13868137 chr3L 13868248 13868268 8 131 15.5 7.0 11.2 0.7 151 chr3L 13868117 3` UTR dysc - chr3L 13868192 3` UTR dysc - chr3L 13868268 3` UTR dysc - chr3L_8_13865001 chr3L_13865001 RAL-301_125b 2660 chr3L 13884334 13884385 chr3L 13884478 13884529 9 144 9.0 0.0 4.5 1.6 195 chr3L 13884334 intron dysc - chr3L 13884432 intron dysc - chr3L 13884529 intron dysc - chr3L_9_13880001 chr3L_13880001 RAL-301_125b 2661 chr3L 13901520 13901581 chr3L 13901647 13901708 25 126 6.0 3.0 4.5 4.5 188 chr3L 13901520 intron dysc - chr3L 13901614 intron dysc - chr3L 13901708 5` UTR dysc - chr3L_25_13900001 chr3L_13900001 RAL-301_125b 2662 chr3L 13920371 13920429 chr3L 13920501 13920559 23 130 7.5 5.0 6.2 3.2 188 chr3L 13920371 intron Rgl - chr3L 13920465 intron Rgl - chr3L 13920559 intron Rgl - chr3L_23_13920001 chr3L_13920001 RAL-301_125b 2663 chr3L 13931283 13931368 chr3L 13931438 13931523 19 154 8.5 6.0 7.2 2.3 240 chr3L 13931283 intron Gl + chr3L 13931403 intron Gl + chr3L 13931523 intron Gl + chr3L_19_13930001 chr3L_13930001 RAL-301_125b 2664 chr3L 13957837 13957904 chr3L 13958080 13958142 36 239 6.0 7.5 6.8 4.6 305 chr3L 13957837 intron CG32137 + chr3L 13957990 intron CG32137 + chr3L 13958142 intron CG32137 + chr3L_36_13955001 chr3L_13955001 RAL-301_125b 2665 chr3L 13993959 13993970 chr3L 13994089 13994100 8 130 6.5 9.0 7.8 0.9 141 chr3L 13993959 intergenic 26-29-p + chr3L 13994030 intergenic 26-29-p + chr3L 13994100 intergenic 26-29-p + chr3L_8_13990001 chr3L_13990001 RAL-301_125b 2666 chr3L 13993996 13994016 chr3L 13994127 13994147 7 131 6.5 16.0 11.2 0.6 151 chr3L 13993996 intergenic 26-29-p + chr3L 13994072 intergenic 26-29-p + chr3L 13994147 intergenic 26-29-p + chr3L_7_13990001 chr3L_13990001 RAL-301_125b 2667 chr3L 14063016 14063060 chr3L 14063330 14063380 16 319 17.0 11.0 14.0 1.1 364 chr3L 14063016 intron CG32138 + chr3L 14063198 intron CG32138 + chr3L 14063380 intron CG32138 + chr3L_16_14060001 chr3L_14060001 RAL-301_125b 2668 chr3L 14063061 14063079 chr3L 14063381 14063399 10 320 11.0 25.5 18.2 0.5 338 chr3L 14063061 intron CG32138 + chr3L 14063230 intron CG32138 + chr3L 14063399 intron CG32138 + chr3L_10_14060001 chr3L_14060001 RAL-301_125b 2669 chr3L 14090671 14090676 chr3L 14090809 14090814 4 138 0.0 19.5 9.8 0.4 143 chr3L 14090671 intergenic not near genes chr3L 14090742 intergenic not near genes chr3L 14090814 intergenic not near genes chr3L_4_14090001 chr3L_14090001 RAL-301_125b 2670 chr3L 14168299 14168315 chr3L 14168430 14168446 11 131 5.5 0.0 2.8 2.9 147 chr3L 14168299 intergenic not near genes chr3L 14168372 intergenic not near genes chr3L 14168446 intergenic not near genes chr3L_11_14165001 chr3L_14165001 RAL-301_125b 2671 chr3L 14174069 14174091 chr3L 14174195 14174217 8 126 15.0 8.0 11.5 0.6 148 chr3L 14174069 intergenic not near genes chr3L 14174143 intergenic not near genes chr3L 14174217 intergenic not near genes chr3L_8_14170001 chr3L_14170001 RAL-301_125b 2672 chr3L 14175303 14175381 chr3L 14175501 14175579 12 198 6.0 9.0 7.5 1.4 276 chr3L 14175303 intergenic D - chr3L 14175441 intergenic D - chr3L 14175579 intergenic D - chr3L_12_14175001 chr3L_14175001 RAL-301_125b 2673 chr3L 14194683 14194732 chr3L 14194809 14194858 33 126 9.0 0.5 4.8 5.7 175 chr3L 14194683 intron nuf + chr3L 14194770 intron nuf + chr3L 14194858 intron nuf + chr3L_33_14190001 chr3L_14190001 RAL-301_125b 2674 chr3L 14211390 14211459 chr3L 14211518 14211587 33 128 5.5 8.0 6.8 4.2 197 chr3L 14211390 intron nuf + chr3L 14211488 intron nuf + chr3L 14211587 intron nuf + chr3L_33_14210001 chr3L_14210001 RAL-301_125b 2675 chr3L 14217423 14217431 chr3L 14217549 14217557 5 126 7.0 3.0 5.0 0.8 134 chr3L 14217423 intron nuf + chr3L 14217490 intron nuf + chr3L 14217557 intron nuf + chr3L_5_14215001 chr3L_14215001 RAL-301_125b 2676 chr3L 14228106 14228155 chr3L 14228241 14228290 12 135 7.0 0.0 3.5 2.7 184 chr3L 14228106 intron nuf + chr3L 14228198 intron nuf + chr3L 14228290 intron nuf + chr3L_12_14225001 chr3L_14225001 RAL-301_125b 2677 chr3L 14245535 14245552 chr3L 14245679 14245696 1360 10 144 24.0 8.5 16.2 0.6 161 chr3L 14245535 3` UTR CR44561 - chr3L 14245616 3` UTR CR44561 - chr3L 14245696 intergenic CR44561 -,CR44560 + chr3L_10_14245001 chr3L_14245001 RAL-301_125b 2678 chr3L 14245554 14245594 chr3L 14245677 14245706 1360 18 138 11.5 8.5 10.0 1.6 152 chr3L 14245554 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245706 intergenic CR44561 -,CR44560 + chr3L_18_14245001 chr3L_14245001 RAL-301_125b 2679 chr3L 14267359 14267401 chr3L 14271821 14271863 F-element 23 4462 9.5 0.0 4.8 4.0 4504 chr3L 14267359 intergenic not near genes chr3L 14269611 intergenic not near genes chr3L 14271863 intergenic not near genes chr3L_23_14265001 chr3L_14265001 RAL-301_125b 2680 chr3L 14282596 14282602 chr3L 14282700 14282732 5 123 0.0 16.0 8.0 0.6 136 chr3L 14282596 intron fz + chr3L 14282664 intron fz + chr3L 14282732 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-301_125b 2681 chr3L 14295939 14295987 chr3L 14296475 14296498 roo 15 534 16.0 13.5 14.8 0.9 559 chr3L 14295939 intron fz + chr3L 14296218 intron fz + chr3L 14296498 intron fz + chr3L_15_14295001 chr3L_14295001 RAL-301_125b 2682 chr3L 14295989 14296006 chr3L 14296473 14296536 roo 10 521 11.0 13.5 12.2 0.8 547 chr3L 14295989 intron fz + chr3L 14296262 intron fz + chr3L 14296536 intron fz + chr3L_10_14295001 chr3L_14295001 RAL-301_125b 2683 chr3L 14311999 14312011 chr3L 14316839 14316862 X-element 4 4851 11.5 7.0 9.2 0.4 4863 chr3L 14311999 exon fz + chr3L 14314430 intron fz + chr3L 14316862 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-301_125b 2684 chr3L 14312020 14312045 chr3L 14316834 14316853 X-element 12 4851 5.5 6.5 6.0 1.7 4833 chr3L 14312020 exon fz + chr3L 14314436 intron fz + chr3L 14316853 intron fz + chr3L_12_14310001 chr3L_14310001 RAL-301_125b 2685 chr3L 14341401 14341433 chr3L 14341586 14341618 13 184 0.0 10.0 5.0 2.2 217 chr3L 14341401 intron fz + chr3L 14341510 intron fz + chr3L 14341618 intron fz + chr3L_13_14340001 chr3L_14340001 RAL-301_125b 2686 chr3L 14356473 14356547 chr3L 14356603 14356677 30 129 11.5 5.5 8.5 3.2 204 chr3L 14356473 intron fz + chr3L 14356575 intron fz + chr3L 14356677 intron fz + chr3L_30_14355001 chr3L_14355001 RAL-301_125b 2687 chr3L 14369974 14369984 chr3L 14370105 14370115 4 131 20.5 10.5 15.5 0.2 141 chr3L 14369974 intergenic CG13481 - chr3L 14370044 intergenic CG13481 - chr3L 14370115 intergenic CG13481 - chr3L_4_14370001 chr3L_14370001 RAL-301_125b 2688 chr3L 14369985 14370047 chr3L 14370104 14370127 28 120 9.0 10.5 9.8 2.6 142 chr3L 14369985 intergenic CG13481 - chr3L 14370056 intergenic CG13481 - chr3L 14370127 intergenic CG13481 - chr3L_28_14370001 chr3L_14370001 RAL-301_125b 2689 chr3L 14429401 14429461 chr3L 14429527 14429587 16 126 10.0 9.0 9.5 1.5 186 chr3L 14429401 intron bbg - chr3L 14429494 intron bbg - chr3L 14429587 intron bbg - chr3L_16_14425001 chr3L_14425001 RAL-301_125b 2690 chr3L 14433857 14433933 chr3L 14434415 14434492 5 544 4.5 2.5 3.5 1.1 635 chr3L 14433857 intron bbg - chr3L 14434174 intron bbg - chr3L 14434492 intron bbg - chr3L_5_14430001 chr3L_14430001 RAL-301_125b 2691 chr3L 14443584 14443649 chr3L 14443823 14443888 28 238 8.0 9.5 8.8 2.9 304 chr3L 14443584 intron bbg - chr3L 14443736 intron bbg - chr3L 14443888 intron bbg - chr3L_28_14440001 chr3L_14440001 RAL-301_125b 2692 chr3L 14445684 14445750 chr3L 14445900 14445970 27 224 3.0 5.0 4.0 5.4 286 chr3L 14445684 intron bbg - chr3L 14445827 intron bbg - chr3L 14445970 intron bbg - chr3L_27_14445001 chr3L_14445001 RAL-301_125b 2693 chr3L 14462836 14462911 chr3L 14462974 14463049 23 138 4.0 7.5 5.8 3.4 213 chr3L 14462836 intron bbg - chr3L 14462942 intron bbg - chr3L 14463049 intron bbg - chr3L_23_14460001 chr3L_14460001 RAL-301_125b 2694 chr3L 14468404 14468474 chr3L 14473660 14473730 copia 24 5255 8.5 4.5 6.5 3.2 5326 chr3L 14468404 intron bbg - chr3L 14471067 intron bbg - chr3L 14473730 intron bbg - chr3L_24_14470001 chr3L_14470001 RAL-301_125b 2695 chr3L 14485973 14486048 chr3L 14486104 14486179 15 127 4.5 7.0 5.8 2.2 206 chr3L 14485973 intron bbg - chr3L 14486076 intron bbg - chr3L 14486179 intron bbg - chr3L_15_14485001 chr3L_14485001 RAL-301_125b 2696 chr3L 14514294 14514358 chr3L 14514575 14514651 28 292 0.0 8.0 4.0 5.6 357 chr3L 14514294 intron bbg - chr3L 14514472 intron bbg - chr3L 14514651 intron bbg - chr3L_28_14510001 chr3L_14510001 RAL-301_125b 2697 chr3L 14522009 14522080 chr3L 14522146 14522217 31 137 8.5 11.5 10.0 2.8 208 chr3L 14522009 intron bbg - chr3L 14522113 intron bbg - chr3L 14522217 intron bbg - chr3L_31_14520001 chr3L_14520001 RAL-301_125b 2698 chr3L 14534711 14534766 chr3L 14534838 14534893 20 127 6.0 3.5 4.8 3.4 182 chr3L 14534711 intron bbg - chr3L 14534802 intron bbg - chr3L 14534893 intron bbg - chr3L_20_14530001 chr3L_14530001 RAL-301_125b 2699 chr3L 14546762 14546810 chr3L 14546913 14546961 10 151 0.0 6.5 3.2 2.4 199 chr3L 14546762 intron CG9238 - chr3L 14546862 intron CG9238 - chr3L 14546961 intron CG9238 - chr3L_10_14545001 chr3L_14545001 RAL-301_125b 2700 chr3L 14584112 14584187 chr3L 14584249 14584324 32 137 7.0 11.0 9.0 3.2 212 chr3L 14584112 intron HGTX - chr3L 14584218 intron HGTX - chr3L 14584324 intron HGTX - chr3L_32_14580001 chr3L_14580001 RAL-301_125b 2701 chr3L 14611406 14611475 chr3L 14611553 14611622 33 147 12.5 2.5 7.5 3.9 216 chr3L 14611406 intergenic not near genes chr3L 14611514 intergenic not near genes chr3L 14611622 intergenic not near genes chr3L_33_14610001 chr3L_14610001 RAL-301_125b 2702 chr3L 14633745 14633812 chr3L 14633891 14633958 25 146 8.0 10.5 9.2 2.5 213 chr3L 14633745 intron dlp + chr3L 14633852 intron dlp + chr3L 14633958 intron dlp + chr3L_25_14630001 chr3L_14630001 RAL-301_125b 2703 chr3L 14702004 14702014 chr3L 14702133 14702143 6 129 7.0 19.5 13.2 0.4 139 chr3L 14702004 intron ome + chr3L 14702074 intron ome + chr3L 14702143 intron ome + chr3L_6_14700001 chr3L_14700001 RAL-301_125b 2704 chr3L 14725525 14725615 chr3L 14728588 14728646 Doc 33 3047 0.0 11.0 5.5 5.1 3121 chr3L 14725525 intron ome + chr3L 14727086 intron ome + chr3L 14728646 intron ome + chr3L_33_14725001 chr3L_14725001 RAL-301_125b 2705 chr3L 14809143 14809214 chr3L 14809274 14809345 39 131 11.0 5.5 8.2 4.2 202 chr3L 14809143 intron CG17839 + chr3L 14809244 intron CG17839 + chr3L 14809345 intron CG17839 + chr3L_39_14805001 chr3L_14805001 RAL-301_125b 2706 chr3L 14825124 14825154 chr3L 14832901 14832931 Stalker2 16 7777 6.5 17.0 11.8 1.2 7807 chr3L 14825124 intron CG17839 + chr3L 14829028 intron CG17839 + chr3L 14832931 intron CG17839 + chr3L_16_14825001 chr3L_14825001 RAL-301_125b 2707 chr3L 14860877 14860946 chr3L 14861008 14861077 30 130 11.0 8.5 9.8 2.8 200 chr3L 14860877 intron CG17839 + chr3L 14860977 intron CG17839 + chr3L 14861077 intron CG17839 + chr3L_30_14860001 chr3L_14860001 RAL-301_125b 2708 chr3L 14866776 14866835 chr3L 14866916 14866976 14 140 3.0 10.0 6.5 1.9 200 chr3L 14866776 exon CG17839 + chr3L 14866876 intron CG17839 + chr3L 14866976 intron CG17839 + chr3L_14_14865001 chr3L_14865001 RAL-301_125b 2709 chr3L 14883259 14883330 chr3L 14883389 14883460 34 129 9.0 4.0 6.5 4.5 201 chr3L 14883259 intergenic not near genes chr3L 14883360 intergenic not near genes chr3L 14883460 intergenic not near genes chr3L_34_14880001 chr3L_14880001 RAL-301_125b 2710 chr3L 14957612 14957641 chr3L 14957793 14957822 15 179 5.5 3.0 4.2 2.9 210 chr3L 14957612 intergenic not near genes chr3L 14957717 intergenic not near genes chr3L 14957822 intergenic not near genes chr3L_15_14955001 chr3L_14955001 RAL-301_125b 2711 chr3L 14957955 14957972 chr3L 14958087 14958104 4 132 3.0 1.5 2.2 1.2 149 chr3L 14957955 intergenic not near genes chr3L 14958030 intergenic not near genes chr3L 14958104 intergenic not near genes chr3L_4_14955001 chr3L_14955001 RAL-301_125b 2712 chr3L 14970717 14970742 chr3L 14971077 14971102 F-element 13 360 20.5 12.5 16.5 0.7 385 chr3L 14970717 intergenic Tom + chr3L 14970910 intergenic not near genes chr3L 14971102 intergenic not near genes chr3L_13_14970001 chr3L_14970001 RAL-301_125b 2713 chr3L 14970743 14970762 chr3L 14971103 14971122 F-element 14 360 17.5 17.0 17.2 0.8 379 chr3L 14970743 intergenic Tom + chr3L 14970932 intergenic not near genes chr3L 14971122 intergenic not near genes chr3L_14_14970001 chr3L_14970001 RAL-301_125b 2714 chr3L 15084726 15084738 chr3L 15084856 15084868 10 130 11.5 26.5 19.0 0.5 142 chr3L 15084726 intron cp309 - chr3L 15084797 intron cp309 - chr3L 15084868 intron cp309 - chr3L_10_15080001 chr3L_15080001 RAL-301_125b 2715 chr3L 15085003 15085081 chr3L 15086219 15086297 1360 43 1216 10.5 6.5 8.5 4.5 1294 chr3L 15085003 intron cp309 - chr3L 15085650 intron cp309 - chr3L 15086297 intron cp309 - chr3L_43_15085001 chr3L_15085001 RAL-301_125b 2716 chr3L 15094923 15094964 chr3L 15095069 15095090 22 144 14.0 11.5 12.8 1.6 167 chr3L 15094923 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095006 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095090 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_22_15095001 chr3L_15095001 RAL-301_125b 2717 chr3L 15103274 15103323 chr3L 15103569 15103641 15 304 0.0 10.0 5.0 2.5 367 chr3L 15103274 intron CTPsyn + chr3L 15103458 intron CTPsyn + chr3L 15103641 intron CTPsyn + chr3L_15_15100001 chr3L_15100001 RAL-301_125b 2718 chr3L 15146113 15146173 chr3L 15146240 15146312 20 127 0.0 12.5 6.2 2.8 199 chr3L 15146113 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146312 3` UTR Pex3 + chr3L_20_15145001 chr3L_15145001 RAL-301_125b 2719 chr3L 15163578 15163635 chr3L 15163719 15163776 24 140 7.5 12.0 9.8 2.2 198 chr3L 15163578 5` UTR CG7011 - chr3L 15163677 intergenic CG7011 - chr3L 15163776 intergenic CG7011 - chr3L_24_15160001 chr3L_15160001 RAL-301_125b 2720 chr3L 15164994 15165003 chr3L 15165142 15165151 6 148 11.0 0.0 5.5 0.9 157 chr3L 15164994 intergenic not near genes chr3L 15165072 intergenic not near genes chr3L 15165151 intergenic not near genes chr3L_6_15165001 chr3L_15165001 RAL-301_125b 2721 chr3L 15209028 15209059 chr3L 15209164 15209195 14 135 17.5 0.0 8.8 1.4 167 chr3L 15209028 intergenic CG6888 + chr3L 15209112 intergenic not near genes chr3L 15209195 intergenic not near genes chr3L_14_15205001 chr3L_15205001 RAL-301_125b 2722 chr3L 15231347 15231423 chr3L 15231489 15231523 13 128 5.5 8.5 7.0 1.6 176 chr3L 15231347 intergenic not near genes chr3L 15231435 intergenic not near genes chr3L 15231523 intergenic not near genes chr3L_13_15230001 chr3L_15230001 RAL-301_125b 2723 chr3L 15233516 15233528 chr3L 15233647 15233659 6 131 18.0 5.0 11.5 0.5 143 chr3L 15233516 intergenic not near genes chr3L 15233588 intergenic not near genes chr3L 15233659 intergenic not near genes chr3L_6_15230001 chr3L_15230001 RAL-301_125b 2724 chr3L 15233532 15233575 chr3L 15233638 15233706 21 130 9.0 3.0 6.0 3.0 174 chr3L 15233532 intergenic not near genes chr3L 15233619 intergenic not near genes chr3L 15233706 intergenic not near genes chr3L_21_15230001 chr3L_15230001 RAL-301_125b 2725 chr3L 15248963 15248982 chr3L 15249102 15249121 15 139 15.0 16.0 15.5 0.9 158 chr3L 15248963 intergenic not near genes chr3L 15249042 intergenic not near genes chr3L 15249121 intergenic not near genes chr3L_15_15245001 chr3L_15245001 RAL-301_125b 2726 chr3L 15257390 15257451 chr3L 15257653 15257714 24 262 5.0 6.0 5.5 3.7 324 chr3L 15257390 intergenic not near genes chr3L 15257552 intergenic not near genes chr3L 15257714 intergenic not near genes chr3L_24_15255001 chr3L_15255001 RAL-301_125b 2727 chr3L 15264028 15264083 chr3L 15264154 15264211 21 127 0.0 0.0 0.0 21.0 183 chr3L 15264028 intergenic not near genes chr3L 15264120 intergenic not near genes chr3L 15264211 intergenic not near genes chr3L_21_15260001 chr3L_15260001 RAL-301_125b 2728 chr3L 15267886 15267904 chr3L 15268023 15268041 9 137 0.0 0.0 0.0 9.0 155 chr3L 15267886 intergenic not near genes chr3L 15267964 intergenic not near genes chr3L 15268041 intergenic not near genes chr3L_9_15265001 chr3L_15265001 RAL-301_125b 2729 chr3L 15282668 15282744 chr3L 15282848 15282924 27 179 6.5 6.0 6.2 3.8 256 chr3L 15282668 intergenic not near genes chr3L 15282796 intergenic not near genes chr3L 15282924 intergenic not near genes chr3L_27_15280001 chr3L_15280001 RAL-301_125b 2730 chr3L 15284527 15284592 chr3L 15284656 15284721 21 129 10.0 12.0 11.0 1.8 194 chr3L 15284527 intergenic not near genes chr3L 15284624 intergenic not near genes chr3L 15284721 intergenic not near genes chr3L_21_15280001 chr3L_15280001 RAL-301_125b 2731 chr3L 15295717 15295780 chr3L 15298610 15298673 gypsy5 13 2893 8.0 7.5 7.8 1.5 2956 chr3L 15295717 intergenic not near genes chr3L 15297195 intergenic not near genes chr3L 15298673 intergenic Best4 + chr3L_13_15295001 chr3L_15295001 RAL-301_125b 2732 chr3L 15333089 15333150 chr3L 15333221 15333270 18 130 10.5 8.5 9.5 1.7 181 chr3L 15333089 intergenic CR43247 + chr3L 15333180 intergenic CR43247 + chr3L 15333270 intergenic CR43247 + chr3L_18_15330001 chr3L_15330001 RAL-301_125b 2733 chr3L 15348061 15348139 chr3L 15348269 15348347 26 207 6.5 6.5 6.5 3.5 286 chr3L 15348061 intergenic not near genes chr3L 15348204 intergenic not near genes chr3L 15348347 intergenic not near genes chr3L_26_15345001 chr3L_15345001 RAL-301_125b 2734 chr3L 15358320 15358381 chr3L 15358501 15358562 25 181 9.0 7.0 8.0 2.8 242 chr3L 15358320 intergenic not near genes chr3L 15358441 intergenic not near genes chr3L 15358562 intergenic not near genes chr3L_25_15355001 chr3L_15355001 RAL-301_125b 2735 chr3L 15405976 15406049 chr3L 15406108 15406149 17 130 5.0 6.5 5.8 2.5 173 chr3L 15405976 intergenic not near genes chr3L 15406062 intergenic not near genes chr3L 15406149 intergenic not near genes chr3L_17_15405001 chr3L_15405001 RAL-301_125b 2736 chr3L 15423716 15423781 chr3L 15426610 15426675 opus 33 2894 6.5 11.0 8.8 3.4 2959 chr3L 15423716 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426675 intergenic not near genes chr3L_33_15425001 chr3L_15425001 RAL-301_125b 2737 chr3L 15457154 15457287 chr3L 15457284 15457429 7 139 0.0 0.0 0.0 7.0 275 chr3L 15457154 intergenic CR45395 + chr3L 15457292 intergenic CR45395 + chr3L 15457429 intergenic CR45395 + chr3L_7_15455001 chr3L_15455001 RAL-301_125b 2738 chr3L 15474640 15474689 chr3L 15474829 15474878 14 189 5.0 3.5 4.2 2.7 238 chr3L 15474640 intergenic not near genes chr3L 15474759 intergenic not near genes chr3L 15474878 intergenic not near genes chr3L_14_15470001 chr3L_15470001 RAL-301_125b 2739 chr3L 15482269 15482343 chr3L 15482418 15482495 27 151 5.0 9.0 7.0 3.4 226 chr3L 15482269 intergenic not near genes chr3L 15482382 intergenic not near genes chr3L 15482495 intergenic not near genes chr3L_27_15480001 chr3L_15480001 RAL-301_125b 2740 chr3L 15483249 15483322 chr3L 15483428 15483501 26 178 11.5 0.0 5.8 3.8 252 chr3L 15483249 intergenic not near genes chr3L 15483375 intergenic not near genes chr3L 15483501 intergenic not near genes chr3L_26_15480001 chr3L_15480001 RAL-301_125b 2741 chr3L 15493317 15493346 chr3L 15493462 15493491 11 145 5.5 12.0 8.8 1.1 174 chr3L 15493317 exon CG12355 - chr3L 15493404 intron CG12355 - chr3L 15493491 5` UTR CG12355 - chr3L_11_15490001 chr3L_15490001 RAL-301_125b 2742 chr3L 15540911 15540923 chr3L 15541027 15541034 7 121 13.5 23.5 18.5 0.4 123 chr3L 15540911 intron CrebA + chr3L 15540972 intron CrebA + chr3L 15541034 intron CrebA + chr3L_7_15540001 chr3L_15540001 RAL-301_125b 2743 chr3L 15541576 15541647 chr3L 15541717 15541788 29 141 9.0 1.0 5.0 4.8 212 chr3L 15541576 intron CrebA + chr3L 15541682 intron CrebA + chr3L 15541788 intron CrebA + chr3L_29_15540001 chr3L_15540001 RAL-301_125b 2744 chr3L 15541902 15541971 chr3L 15542046 15542115 25 142 1.0 6.5 3.8 5.2 213 chr3L 15541902 intron CrebA + chr3L 15542008 intron CrebA + chr3L 15542115 intron CrebA + chr3L_25_15540001 chr3L_15540001 RAL-301_125b 2745 chr3L 15550670 15550737 chr3L 15554063 15554130 26 3393 61.0 41.5 51.2 0.5 3460 chr3L 15550670 intron CrebA + chr3L 15552400 3` UTR CrebA + chr3L 15554130 5` UTR AGO2 + chr3L_26_15550001 chr3L_15550001 RAL-301_125b 2746 chr3L 15554881 15554944 chr3L 15556718 15556781 S-element 31 1836 11.5 11.0 11.2 2.5 1900 chr3L 15554881 intron AGO2 + chr3L 15555831 intron AGO2 + chr3L 15556781 intron AGO2 + chr3L_31_15555001 chr3L_15555001 RAL-301_125b 2747 chr3L 15594572 15594653 chr3L 15594698 15594782 10 118 13.0 10.5 11.8 0.8 210 chr3L 15594572 intron RhoGAP71E + chr3L 15594677 intron RhoGAP71E + chr3L 15594782 intron RhoGAP71E + chr3L_10_15590001 chr3L_15590001 RAL-301_125b 2748 chr3L 15600118 15600196 chr3L 15600254 15600347 20 150 7.0 0.0 3.5 4.4 229 chr3L 15600118 intron RhoGAP71E + chr3L 15600232 intron RhoGAP71E + chr3L 15600347 intron RhoGAP71E + chr3L_20_15600001 chr3L_15600001 RAL-301_125b 2749 chr3L 15614007 15614030 chr3L 15614137 15614160 15 129 5.0 9.0 7.0 1.9 153 chr3L 15614007 exon comm3 - chr3L 15614084 intron comm3 - chr3L 15614160 intron comm3 - chr3L_15_15610001 chr3L_15610001 RAL-301_125b 2750 chr3L 15616430 15616476 chr3L 15616564 15616612 9 135 4.0 7.5 5.8 1.3 182 chr3L 15616430 intron comm3 - chr3L 15616521 intron comm3 - chr3L 15616612 intron comm3 - chr3L_9_15615001 chr3L_15615001 RAL-301_125b 2751 chr3L 15617769 15617807 chr3L 15618009 15618052 9 240 0.0 16.5 8.2 1.0 283 chr3L 15617769 intron comm3 - chr3L 15617910 intron comm3 - chr3L 15618052 intron comm3 - chr3L_9_15615001 chr3L_15615001 RAL-301_125b 2752 chr3L 15633154 15633163 chr3L 15633284 15633292 10 130 21.5 9.0 15.2 0.6 138 chr3L 15633154 intron comm3 - chr3L 15633223 intron comm3 - chr3L 15633292 intron comm3 - chr3L_10_15630001 chr3L_15630001 RAL-301_125b 2753 chr3L 15633175 15633212 chr3L 15633305 15633342 14 130 6.0 16.0 11.0 1.2 167 chr3L 15633175 intron comm3 - chr3L 15633258 intron comm3 - chr3L 15633342 intron comm3 - chr3L_14_15630001 chr3L_15630001 RAL-301_125b 2754 chr3L 15658620 15658666 chr3L 15658841 15658887 11 221 9.5 6.0 7.8 1.2 267 chr3L 15658620 intergenic Eig71Eh -,Eig71Eg + chr3L 15658754 intergenic Eig71Eh - chr3L 15658887 intergenic Eig71Eh - chr3L_11_15655001 chr3L_15655001 RAL-301_125b 2755 chr3L 15744581 15744648 chr3L 15745005 15745072 29 424 71.0 54.5 62.8 0.5 491 chr3L 15744581 intergenic not near genes chr3L 15744826 intergenic not near genes chr3L 15745072 intergenic not near genes chr3L_29_15740001 chr3L_15740001 RAL-301_125b 2756 chr3L 15756819 15756911 chr3L 15756962 15757043 17 136 1.5 0.0 0.8 9.4 224 chr3L 15756819 intergenic not near genes chr3L 15756931 intergenic not near genes chr3L 15757043 intergenic not near genes chr3L_17_15755001 chr3L_15755001 RAL-301_125b 2757 chr3L 15760660 15760698 chr3L 15760794 15760832 17 132 11.0 11.5 11.2 1.4 172 chr3L 15760660 intergenic not near genes chr3L 15760746 intergenic not near genes chr3L 15760832 intergenic not near genes chr3L_17_15760001 chr3L_15760001 RAL-301_125b 2758 chr3L 15769113 15769124 chr3L 15769254 15769265 5 141 0.0 10.0 5.0 0.8 152 chr3L 15769113 intergenic not near genes chr3L 15769189 intergenic not near genes chr3L 15769265 intergenic not near genes chr3L_5_15765001 chr3L_15765001 RAL-301_125b 2759 chr3L 15770184 15770254 chr3L 15770321 15770387 23 131 4.5 3.0 3.8 4.8 203 chr3L 15770184 intergenic not near genes chr3L 15770286 intergenic not near genes chr3L 15770387 intergenic not near genes chr3L_23_15770001 chr3L_15770001 RAL-301_125b 2760 chr3L 15781614 15781688 chr3L 15781785 15781887 6 194 3.5 0.0 1.8 2.1 273 chr3L 15781614 intergenic not near genes chr3L 15781750 intergenic not near genes chr3L 15781887 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-301_125b 2761 chr3L 15840384 15840466 chr3L 15840522 15840571 16 132 8.0 6.5 7.2 2.0 187 chr3L 15840384 intron CG32150 - chr3L 15840478 intron CG32150 - chr3L 15840571 intron CG32150 - chr3L_16_15840001 chr3L_15840001 RAL-301_125b 2762 chr3L 15843032 15843046 chr3L 15843223 15843237 9 191 0.0 18.5 9.2 0.9 205 chr3L 15843032 intron CG32150 - chr3L 15843134 intron CG32150 - chr3L 15843237 intron CG32150 - chr3L_9_15840001 chr3L_15840001 RAL-301_125b 2763 chr3L 15871542 15871579 chr3L 15871676 15871713 24 134 19.0 0.0 9.5 2.3 171 chr3L 15871542 intron pHCl - chr3L 15871628 intron pHCl - chr3L 15871713 intron pHCl - chr3L_24_15870001 chr3L_15870001 RAL-301_125b 2764 chr3L 15896041 15896121 chr3L 15896180 15896260 38 133 7.5 6.5 7.0 4.8 219 chr3L 15896041 intron pHCl - chr3L 15896150 intron pHCl - chr3L 15896260 intron pHCl - chr3L_38_15895001 chr3L_15895001 RAL-301_125b 2765 chr3L 15899199 15899218 chr3L 15899796 15899834 jockey 11 600 8.0 8.5 8.2 1.2 635 chr3L 15899199 intergenic pHCl - chr3L 15899516 intergenic pHCl - chr3L 15899834 intergenic sff - chr3L_11_15895001 chr3L_15895001 RAL-301_125b 2766 chr3L 15899219 15899258 chr3L 15899792 15899848 jockey 10 593 4.5 7.5 6.0 1.4 629 chr3L 15899219 intergenic pHCl - chr3L 15899534 intergenic not near genes chr3L 15899848 intergenic sff - chr3L_10_15895001 chr3L_15895001 RAL-301_125b 2767 chr3L 15929150 15929221 chr3L 15938347 15938418 roo 39 9197 9.0 8.5 8.8 4.0 9268 chr3L 15929150 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938418 intron Pka-C3 - chr3L_39_15930001 chr3L_15930001 RAL-301_125b 2768 chr3L 15939825 15939875 chr3L 15939946 15940001 6 123 11.0 12.5 11.8 0.5 176 chr3L 15939825 intron Pka-C3 - chr3L 15939913 intron Pka-C3 - chr3L 15940001 intron Pka-C3 - chr3L_6_15935001 chr3L_15935001 RAL-301_125b 2769 chr3L 16047734 16047744 chr3L 16047863 16047873 6 129 0.0 7.0 3.5 1.3 139 chr3L 16047734 intron th - chr3L 16047804 intron th - chr3L 16047873 intron th - chr3L_6_16045001 chr3L_16045001 RAL-301_125b 2770 chr3L 16149153 16149228 chr3L 16149292 16149367 28 139 11.0 8.0 9.5 2.7 214 chr3L 16149153 intron CG5151 - chr3L 16149260 intron CG5151 - chr3L 16149367 intron CG5151 - chr3L_28_16145001 chr3L_16145001 RAL-301_125b 2771 chr3L 16152619 16152625 chr3L 16152749 16152755 6 130 8.5 11.0 9.8 0.6 136 chr3L 16152619 intron CG5151 - chr3L 16152687 intron CG5151 - chr3L 16152755 intron CG5151 - chr3L_6_16150001 chr3L_16150001 RAL-301_125b 2772 chr3L 16158758 16158830 chr3L 16158893 16158965 38 135 8.0 11.0 9.5 3.6 207 chr3L 16158758 intron CG5151 - chr3L 16158862 intron CG5151 - chr3L 16158965 intron CG5151 - chr3L_38_16155001 chr3L_16155001 RAL-301_125b 2773 chr3L 16183096 16183121 chr3L 16183235 16183260 9 139 6.0 0.0 3.0 2.2 164 chr3L 16183096 intergenic not near genes chr3L 16183178 intergenic not near genes chr3L 16183260 intergenic not near genes chr3L_9_16180001 chr3L_16180001 RAL-301_125b 2774 chr3L 16184064 16184127 chr3L 16188933 16188996 X-element 28 4869 9.5 9.5 9.5 2.7 4932 chr3L 16184064 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188996 intergenic not near genes chr3L_28_16185001 chr3L_16185001 RAL-301_125b 2775 chr3L 16194306 16194365 chr3L 16194423 16194455 21 118 6.0 9.0 7.5 2.5 149 chr3L 16194306 intergenic not near genes chr3L 16194380 intergenic not near genes chr3L 16194455 intergenic not near genes chr3L_21_16190001 chr3L_16190001 RAL-301_125b 2776 chr3L 16198344 16198408 chr3L 16198479 16198543 25 134 6.0 6.0 6.0 3.6 199 chr3L 16198344 exon CG33687 + chr3L 16198444 exon CG33687 + chr3L 16198543 exon CG33687 + chr3L_25_16195001 chr3L_16195001 RAL-301_125b 2777 chr3L 16212765 16212838 chr3L 16212907 16212979 13 142 7.5 0.0 3.8 2.7 214 chr3L 16212765 intergenic CG13073 - chr3L 16212872 intergenic CG13073 - chr3L 16212979 intergenic CG13073 - chr3L_13_16210001 chr3L_16210001 RAL-301_125b 2778 chr3L 16236295 16236370 chr3L 16236460 16236535 43 164 6.0 11.5 8.8 4.4 240 chr3L 16236295 3` UTR l(3)72Dp + chr3L 16236415 3` UTR l(3)72Dp + chr3L 16236535 3` UTR l(3)72Dp + chr3L_43_16235001 chr3L_16235001 RAL-301_125b 2779 chr3L 16279040 16279090 chr3L 16279171 16279221 16 131 10.5 8.5 9.5 1.5 181 chr3L 16279040 exon CG13050 - chr3L 16279130 intron CG13050 - chr3L 16279221 5` UTR CG13050 - chr3L_16_16275001 chr3L_16275001 RAL-301_125b 2780 chr3L 16334144 16334220 chr3L 16334277 16334297 46 131 14.5 8.0 11.2 3.8 153 chr3L 16334144 intergenic CG13056 + chr3L 16334220 intergenic CG13056 + chr3L 16334297 intergenic not near genes chr3L_46_16330001 chr3L_16330001 RAL-301_125b 2781 chr3L 16340213 16340286 chr3L 16340387 16340460 34 174 10.0 5.0 7.5 4.0 247 chr3L 16340213 intron CG4998 + chr3L 16340336 intron CG4998 + chr3L 16340460 exon CG4998 + chr3L_34_16340001 chr3L_16340001 RAL-301_125b 2782 chr3L 16359905 16360001 chr3L 16360225 16360294 16 318 0.0 6.5 3.2 3.8 389 chr3L 16359905 intron CG45057 - chr3L 16360100 intron CG45057 - chr3L 16360294 intron CG45057 - chr3L_16_16360001 chr3L_16360001 RAL-301_125b 2783 chr3L 16360842 16360916 chr3L 16360970 16361007 45 125 15.0 13.0 14.0 3.0 165 chr3L 16360842 intron CG45057 - chr3L 16360924 intron CG45057 - chr3L 16361007 intron CG45057 - chr3L_45_16360001 chr3L_16360001 RAL-301_125b 2784 chr3L 16457481 16457554 chr3L 16457627 16457699 27 145 8.5 8.0 8.2 2.9 218 chr3L 16457481 intron CG33158 + chr3L 16457590 intron CG33158 + chr3L 16457699 intron CG33158 + chr3L_27_16455001 chr3L_16455001 RAL-301_125b 2785 chr3L 16476747 16476777 chr3L 16476882 16476913 5 135 5.5 4.0 4.8 0.9 166 chr3L 16476747 intron,intron CG33158 +,aos - chr3L 16476830 intron,intron CG33158 +,aos - chr3L 16476913 intron,intron CG33158 +,aos - chr3L_5_16475001 chr3L_16475001 RAL-301_125b 2786 chr3L 16493937 16493987 chr3L 16494504 16494553 jockey 12 565 10.0 10.5 10.2 1.1 616 chr3L 16493937 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494245 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494553 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_12_16490001 chr3L_16490001 RAL-301_125b 2787 chr3L 16493991 16493999 chr3L 16494501 16494565 jockey 5 555 7.5 9.0 8.2 0.5 574 chr3L 16493991 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494278 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494565 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_5_16490001 chr3L_16490001 RAL-301_125b 2788 chr3L 16503596 16503649 chr3L 16503723 16503776 18 124 11.0 10.0 10.5 1.6 180 chr3L 16503596 intron CG43373 - chr3L 16503686 intron CG43373 - chr3L 16503776 intron CG43373 - chr3L_18_16500001 chr3L_16500001 RAL-301_125b 2789 chr3L 16506114 16506134 chr3L 16506309 16506329 10 195 0.0 13.5 6.8 1.3 215 chr3L 16506114 intron CG43373 - chr3L 16506222 intron CG43373 - chr3L 16506329 intron CG43373 - chr3L_10_16505001 chr3L_16505001 RAL-301_125b 2790 chr3L 16506621 16506689 chr3L 16506864 16506932 39 242 9.0 7.5 8.2 4.2 311 chr3L 16506621 intron CG43373 - chr3L 16506776 intron CG43373 - chr3L 16506932 intron CG43373 - chr3L_39_16505001 chr3L_16505001 RAL-301_125b 2791 chr3L 16533416 16533419 chr3L 20579167 20579170 4 4045751 10.5 31.0 20.8 0.2 4045754 chr3L 16533416 intron CG43373 - chr3L 18556293 intergenic not near genes chr3L 20579170 intergenic not near genes chr3L_4_18555001 chr3L_18555001 RAL-301_125b 2792 chr3L 16533521 16533585 chr3L 16533680 16533746 23 161 0.0 9.5 4.8 4.0 225 chr3L 16533521 intron CG43373 - chr3L 16533634 intron CG43373 - chr3L 16533746 intron CG43373 - chr3L_23_16530001 chr3L_16530001 RAL-301_125b 2793 chr3L 16537821 16537871 chr3L 16537958 16538008 19 137 6.0 7.0 6.5 2.5 187 chr3L 16537821 intron CG43373 - chr3L 16537914 intron CG43373 - chr3L 16538008 intron CG43373 - chr3L_19_16535001 chr3L_16535001 RAL-301_125b 2794 chr3L 16540017 16540073 chr3L 16540155 16540211 24 138 12.0 7.0 9.5 2.3 194 chr3L 16540017 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540211 intron CG43373 - chr3L_24_16540001 chr3L_16540001 RAL-301_125b 2795 chr3L 16574213 16574283 chr3L 16574351 16574421 26 137 11.5 7.0 9.2 2.5 208 chr3L 16574213 intergenic mbf1 + chr3L 16574317 intergenic mbf1 + chr3L 16574421 intergenic mbf1 + chr3L_26_16570001 chr3L_16570001 RAL-301_125b 2796 chr3L 16616464 16616536 chr3L 16621842 16621914 297 26 5377 9.0 8.0 8.5 2.7 5450 chr3L 16616464 3` UTR Abl - chr3L 16619189 3` UTR Abl - chr3L 16621914 3` UTR Abl - chr3L_26_16615001 chr3L_16615001 RAL-301_125b 2797 chr3L 16638727 16638798 chr3L 16638857 16638928 34 129 9.0 9.0 9.0 3.4 201 chr3L 16638727 intron Abl - chr3L 16638828 intron Abl - chr3L 16638928 intron Abl - chr3L_34_16635001 chr3L_16635001 RAL-301_125b 2798 chr3L 16643293 16643363 chr3L 16643421 16643491 30 127 10.0 7.5 8.8 3.1 198 chr3L 16643293 intron Abl - chr3L 16643392 intron Abl - chr3L 16643491 intron Abl - chr3L_30_16640001 chr3L_16640001 RAL-301_125b 2799 chr3L 16659064 16659069 chr3L 16659190 16659193 5 127 18.5 11.5 15.0 0.3 129 chr3L 16659064 intron Baldspot - chr3L 16659128 intron Baldspot - chr3L 16659193 intron Baldspot - chr3L_5_16655001 chr3L_16655001 RAL-301_125b 2800 chr3L 16659072 16659102 chr3L 16659188 16659230 17 126 13.0 11.0 12.0 1.3 158 chr3L 16659072 intron Baldspot - chr3L 16659151 intron Baldspot - chr3L 16659230 exon Baldspot - chr3L_17_16655001 chr3L_16655001 RAL-301_125b 2801 chr3L 16659103 16659130 chr3L 16659181 16659248 13 121 10.0 11.5 10.8 1.1 145 chr3L 16659103 intron Baldspot - chr3L 16659176 intron Baldspot - chr3L 16659248 exon Baldspot - chr3L_13_16655001 chr3L_16655001 RAL-301_125b 2802 chr3L 16659522 16659533 chr3L 16659653 16659664 6 131 4.5 0.0 2.2 1.9 142 chr3L 16659522 intron Baldspot - chr3L 16659593 intron Baldspot - chr3L 16659664 intron Baldspot - chr3L_6_16655001 chr3L_16655001 RAL-301_125b 2803 chr3L 16683978 16684037 chr3L 16689249 16689308 copia 21 5271 12.0 9.5 10.8 1.8 5330 chr3L 16683978 intron,intron Lasp -,CG43954 - chr3L 16686643 intron,intron Lasp -,CG43954 - chr3L 16689308 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_21_16685001 chr3L_16685001 RAL-301_125b 2804 chr3L 16786979 16786990 chr3L 16787090 16787116 5 123 1.5 15.5 8.5 0.5 137 chr3L 16786979 intergenic Int6 - chr3L 16787048 intergenic Int6 - chr3L 16787116 intergenic Int6 -,CG9674 - chr3L_5_16785001 chr3L_16785001 RAL-301_125b 2805 chr3L 16807996 16808074 chr3L 16808122 16808203 27 127 9.5 4.5 7.0 3.4 207 chr3L 16807996 intron nudC + chr3L 16808100 intron nudC + chr3L 16808203 intron nudC + chr3L_27_16805001 chr3L_16805001 RAL-301_125b 2806 chr3L 16818702 16818777 chr3L 16818828 16818903 35 126 14.5 11.0 12.8 2.5 201 chr3L 16818702 intron,intron nudC +,CG13024 - chr3L 16818802 intron,intron nudC +,CG13024 - chr3L 16818903 intron,intron nudC +,CG13024 - chr3L_35_16815001 chr3L_16815001 RAL-301_125b 2807 chr3L 16825333 16825349 chr3L 16825462 16825478 5 129 1.5 9.5 5.5 0.8 145 chr3L 16825333 intron CG13024 - chr3L 16825406 intron CG13024 - chr3L 16825478 intron CG13024 - chr3L_5_16825001 chr3L_16825001 RAL-301_125b 2808 chr3L 16831733 16831805 chr3L 16838418 16838490 42 6686 64.5 65.0 64.8 0.6 6757 chr3L 16831733 intergenic not near genes chr3L 16835112 intergenic not near genes chr3L 16838490 intergenic not near genes chr3L_42_16835001 chr3L_16835001 RAL-301_125b 2809 chr3L 16844975 16845044 chr3L 16845138 16845179 33 161 12.5 9.0 10.8 2.8 204 chr3L 16844975 5` UTR CG9669 - chr3L 16845077 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845179 intergenic CG9669 -,CG9715 + chr3L_33_16845001 chr3L_16845001 RAL-301_125b 2810 chr3L 16869539 16869603 chr3L 16869672 16869736 30 133 8.0 14.5 11.2 2.5 197 chr3L 16869539 intron Lmpt + chr3L 16869638 intron Lmpt + chr3L 16869736 intron Lmpt + chr3L_30_16865001 chr3L_16865001 RAL-301_125b 2811 chr3L 16882281 16882301 chr3L 16882418 16882439 5 138 5.5 13.5 9.5 0.5 158 chr3L 16882281 intron Lmpt + chr3L 16882360 intron Lmpt + chr3L 16882439 intron Lmpt + chr3L_5_16880001 chr3L_16880001 RAL-301_125b 2812 chr3L 16912897 16912908 chr3L 16913025 16913036 6 128 3.5 9.5 6.5 0.8 139 chr3L 16912897 intron Lmpt + chr3L 16912966 intron Lmpt + chr3L 16913036 intron Lmpt + chr3L_6_16910001 chr3L_16910001 RAL-301_125b 2813 chr3L 16912914 16912953 chr3L 16913042 16913081 18 128 3.5 11.0 7.2 2.2 167 chr3L 16912914 intron Lmpt + chr3L 16912998 intron Lmpt + chr3L 16913081 intron Lmpt + chr3L_18_16910001 chr3L_16910001 RAL-301_125b 2814 chr3L 16941350 16941432 chr3L 16941501 16941583 25 151 8.5 3.5 6.0 3.6 233 chr3L 16941350 intron Cpr73D - chr3L 16941466 intron Cpr73D - chr3L 16941583 intron Cpr73D - chr3L_25_16940001 chr3L_16940001 RAL-301_125b 2815 chr3L 16945699 16945753 chr3L 16954892 16954956 roo 26 9192 8.0 10.0 9.0 2.6 9257 chr3L 16945699 exon Obp73a + chr3L 16950328 intergenic not near genes chr3L 16954956 5` UTR Nc73EF + chr3L_26_16950001 chr3L_16950001 RAL-301_125b 2816 chr3L 17027127 17027165 chr3L 17027269 17027307 10 142 13.0 7.5 10.2 0.9 180 chr3L 17027127 intergenic Fit2 +,CG7730 + chr3L 17027217 intergenic Fit2 +,CG7730 + chr3L 17027307 intergenic Fit2 +,CG7730 + chr3L_10_17025001 chr3L_17025001 RAL-301_125b 2817 chr3L 17034890 17034961 chr3L 17035123 17035199 G2 19 237 10.5 8.5 9.5 1.8 309 chr3L 17034890 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035199 intergenic beg + chr3L_19_17035001 chr3L_17035001 RAL-301_125b 2818 chr3L 17049959 17050028 chr3L 17050100 17050169 28 139 9.0 6.5 7.8 3.2 210 chr3L 17049959 intron rogdi + chr3L 17050064 intron rogdi + chr3L 17050169 intron rogdi + chr3L_28_17050001 chr3L_17050001 RAL-301_125b 2819 chr3L 17084959 17085028 chr3L 17094158 17094227 roo 30 9199 10.0 16.0 13.0 2.1 9268 chr3L 17084959 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094227 intron Rbp6 - chr3L_30_17085001 chr3L_17085001 RAL-301_125b 2820 chr3L 17104951 17105007 chr3L 17105078 17105131 19 118 10.0 13.0 11.5 1.5 180 chr3L 17104951 intron Rbp6 - chr3L 17105041 intron Rbp6 - chr3L 17105131 intron Rbp6 - chr3L_19_17105001 chr3L_17105001 RAL-301_125b 2821 chr3L 17107309 17107377 chr3L 17107443 17107516 18 135 7.0 6.5 6.8 2.3 207 chr3L 17107309 intron Rbp6 - chr3L 17107412 intron Rbp6 - chr3L 17107516 intron Rbp6 - chr3L_18_17105001 chr3L_17105001 RAL-301_125b 2822 chr3L 17157582 17157616 chr3L 17157765 17157799 15 180 5.5 21.0 13.2 1.1 217 chr3L 17157582 intron Rbp6 - chr3L 17157690 intron Rbp6 - chr3L 17157799 intron Rbp6 - chr3L_15_17155001 chr3L_17155001 RAL-301_125b 2823 chr3L 17194481 17194548 chr3L 17194632 17194699 33 149 9.5 5.5 7.5 3.9 218 chr3L 17194481 intron Rbp6 - chr3L 17194590 intron Rbp6 - chr3L 17194699 intron Rbp6 - chr3L_33_17190001 chr3L_17190001 RAL-301_125b 2824 chr3L 17263126 17263176 chr3L 17263323 17263352 8 193 17.5 12.0 14.8 0.5 226 chr3L 17263126 intron CR43870 + chr3L 17263239 intron CR43870 + chr3L 17263352 intron CR43870 + chr3L_8_17260001 chr3L_17260001 RAL-301_125b 2825 chr3L 17263180 17263200 chr3L 17263320 17263397 6 176 11.0 10.5 10.8 0.5 217 chr3L 17263180 intron CR43870 + chr3L 17263288 intron CR43870 + chr3L 17263397 intron CR43870 + chr3L_6_17260001 chr3L_17260001 RAL-301_125b 2826 chr3L 17272195 17272265 chr3L 17272378 17272448 21 182 4.0 5.5 4.8 3.6 253 chr3L 17272195 intergenic not near genes chr3L 17272322 intergenic not near genes chr3L 17272448 intergenic not near genes chr3L_21_17270001 chr3L_17270001 RAL-301_125b 2827 chr3L 17310035 17310093 chr3L 17310172 17310232 16 140 0.0 6.5 3.2 3.8 197 chr3L 17310035 intergenic not near genes chr3L 17310134 intergenic not near genes chr3L 17310232 intergenic not near genes chr3L_16_17310001 chr3L_17310001 RAL-301_125b 2828 chr3L 17331023 17331090 chr3L 17331162 17331230 28 140 9.5 11.5 10.5 2.4 207 chr3L 17331023 intergenic not near genes chr3L 17331126 intergenic not near genes chr3L 17331230 intergenic not near genes chr3L_28_17330001 chr3L_17330001 RAL-301_125b 2829 chr3L 17367385 17367457 chr3L 17367529 17367601 42 144 6.0 9.5 7.8 4.8 216 chr3L 17367385 intergenic CR45688 +,Cad74A - chr3L 17367493 intergenic CR45688 +,Cad74A - chr3L 17367601 intergenic Cad74A -,CR45688 + chr3L_42_17365001 chr3L_17365001 RAL-301_125b 2830 chr3L 17400103 17400181 chr3L 17400235 17400312 34 131 11.5 11.5 11.5 2.7 209 chr3L 17400103 intron blot - chr3L 17400208 intron blot - chr3L 17400312 intron blot - chr3L_34_17400001 chr3L_17400001 RAL-301_125b 2831 chr3L 17403637 17403680 chr3L 17403772 17403815 25 135 15.0 14.0 14.5 1.6 178 chr3L 17403637 intron blot - chr3L 17403726 intron blot - chr3L 17403815 intron blot - chr3L_25_17400001 chr3L_17400001 RAL-301_125b 2832 chr3L 17403683 17403703 chr3L 17403763 17403838 8 128 12.0 13.0 12.5 0.6 155 chr3L 17403683 intron blot - chr3L 17403760 intron blot - chr3L 17403838 intron blot - chr3L_8_17400001 chr3L_17400001 RAL-301_125b 2833 chr3L 17408868 17408928 chr3L 17408994 17409054 39 126 9.5 7.5 8.5 4.1 186 chr3L 17408868 intron blot - chr3L 17408961 intron blot - chr3L 17409054 intron blot - chr3L_39_17405001 chr3L_17405001 RAL-301_125b 2834 chr3L 17431258 17431327 chr3L 17431394 17431463 27 136 11.0 6.5 8.8 2.8 205 chr3L 17431258 intron,3` UTR CG32174 -,frc - chr3L 17431360 intron,3` UTR CG32174 -,frc - chr3L 17431463 intron,3` UTR CG32174 -,frc - chr3L_27_17430001 chr3L_17430001 RAL-301_125b 2835 chr3L 17461969 17461992 chr3L 17462164 17462187 13 195 9.5 8.0 8.8 1.3 218 chr3L 17461969 intergenic not near genes chr3L 17462078 intergenic not near genes chr3L 17462187 intergenic not near genes chr3L_13_17460001 chr3L_17460001 RAL-301_125b 2836 chr3L 17510699 17510760 chr3L 17510833 17510861 21 132 5.0 8.0 6.5 2.8 162 chr3L 17510699 exon Oatp74D + chr3L 17510780 intron Oatp74D + chr3L 17510861 intron Oatp74D + chr3L_21_17510001 chr3L_17510001 RAL-301_125b 2837 chr3L 17516936 17517002 chr3L 17524539 17524590 412 28 7607 12.0 9.0 10.5 2.4 7654 chr3L 17516936 intron CG7564 + chr3L 17520763 intron CG7564 + chr3L 17524590 3` UTR CG7564 + chr3L_28_17520001 chr3L_17520001 RAL-301_125b 2838 chr3L 17585329 17585375 chr3L 17585604 17585666 23 277 57.0 83.5 70.2 0.3 337 chr3L 17585329 intron Eip74EF - chr3L 17585498 intron Eip74EF - chr3L 17585666 intron Eip74EF - chr3L_23_17585001 chr3L_17585001 RAL-301_125b 2839 chr3L 17592738 17592813 chr3L 17592879 17592954 41 141 9.0 15.0 12.0 3.2 216 chr3L 17592738 intron Eip74EF - chr3L 17592846 intron Eip74EF - chr3L 17592954 intron Eip74EF - chr3L_41_17590001 chr3L_17590001 RAL-301_125b 2840 chr3L 17612171 17612244 chr3L 17612306 17612338 19 128 6.0 7.0 6.5 2.5 167 chr3L 17612171 intron Eip74EF - chr3L 17612254 intron Eip74EF - chr3L 17612338 intron Eip74EF - chr3L_19_17610001 chr3L_17610001 RAL-301_125b 2841 chr3L 17662956 17662998 chr3L 17663060 17663086 9 117 6.5 10.5 8.5 0.9 130 chr3L 17662956 exon Crtc - chr3L 17663021 exon Crtc - chr3L 17663086 exon Crtc - chr3L_9_17660001 chr3L_17660001 RAL-301_125b 2842 chr3L 17687962 17687966 chr3L 26246019 26246023 5 8558057 44.5 34.5 39.5 0.1 8558061 chr3L 17687962 intergenic not near genes chr3L 21966992 intron CS-2 + chr3L 26246023 intergenic not near genes chr3L_5_21965001 chr3L_21965001 RAL-301_125b 2843 chr3L 17698226 17698235 chr3L 17698858 17698867 Juan 7 632 25.0 7.0 16.0 0.4 641 chr3L 17698226 intron Ccn + chr3L 17698546 intron Ccn + chr3L 17698867 intron Ccn + chr3L_7_17695001 chr3L_17695001 RAL-301_125b 2844 chr3L 17701136 17701144 chr3L 17701267 17701275 7 131 13.5 11.5 12.5 0.5 139 chr3L 17701136 intron Ccn + chr3L 17701206 intron Ccn + chr3L 17701275 intron Ccn + chr3L_7_17700001 chr3L_17700001 RAL-301_125b 2845 chr3L 17701145 17701177 chr3L 17701265 17701308 11 130 7.0 11.5 9.2 1.1 163 chr3L 17701145 intron Ccn + chr3L 17701226 intron Ccn + chr3L 17701308 intron Ccn + chr3L_11_17700001 chr3L_17700001 RAL-301_125b 2846 chr3L 17730812 17730871 chr3L 17738192 17738251 mdg1 25 7380 11.5 11.0 11.2 2.0 7439 chr3L 17730812 intron Ccn + chr3L 17734532 intron Ccn + chr3L 17738251 intron Ccn + chr3L_25_17730001 chr3L_17730001 RAL-301_125b 2847 chr3L 17784773 17784822 chr3L 17784904 17784933 17 124 7.0 14.0 10.5 1.5 160 chr3L 17784773 intergenic CR44668 - chr3L 17784853 3` UTR CR44668 - chr3L 17784933 3` UTR CR44668 - chr3L_17_17780001 chr3L_17780001 RAL-301_125b 2848 chr3L 17790569 17790636 chr3L 17790884 17790951 21 314 2.0 8.5 5.2 3.4 382 chr3L 17790569 intergenic not near genes chr3L 17790760 intergenic CG42815 - chr3L 17790951 intergenic CG42815 - chr3L_21_17790001 chr3L_17790001 RAL-301_125b 2849 chr3L 17791892 17791916 chr3L 17792019 17792043 8 127 4.5 6.5 5.5 1.2 151 chr3L 17791892 intergenic CG42816 -,CG42815 - chr3L 17791968 intergenic CG42816 -,CG42815 - chr3L 17792043 intergenic CG42816 - chr3L_8_17790001 chr3L_17790001 RAL-301_125b 2850 chr3L 17799765 17799837 chr3L 17801602 17801669 S-element 27 1837 5.5 8.5 7.0 3.4 1904 chr3L 17799765 intron NUCB1 - chr3L 17800717 intron NUCB1 - chr3L 17801669 intron NUCB1 - chr3L_27_17800001 chr3L_17800001 RAL-301_125b 2851 chr3L 17836180 17836237 chr3L 17836307 17836364 33 126 12.0 12.5 12.2 2.5 184 chr3L 17836180 intron Grd + chr3L 17836272 intron Grd + chr3L 17836364 intron Grd + chr3L_33_17835001 chr3L_17835001 RAL-301_125b 2852 chr3L 17884645 17884711 chr3L 17884795 17884860 24 150 6.0 0.0 3.0 6.0 215 chr3L 17884645 intergenic CG5506 - chr3L 17884752 intergenic CG5506 - chr3L 17884860 intergenic CG5506 - chr3L_24_17880001 chr3L_17880001 RAL-301_125b 2853 chr3L 17887826 17887874 chr3L 17887962 17888009 15 136 5.5 12.5 9.0 1.5 183 chr3L 17887826 intron CG7402 + chr3L 17887918 intron CG7402 + chr3L 17888009 intron CG7402 + chr3L_15_17885001 chr3L_17885001 RAL-301_125b 2854 chr3L 17896569 17896635 chr3L 17896696 17896762 34 127 11.5 12.5 12.0 2.6 193 chr3L 17896569 intergenic not near genes chr3L 17896666 intergenic not near genes chr3L 17896762 intergenic not near genes chr3L_34_17895001 chr3L_17895001 RAL-301_125b 2855 chr3L 17918331 17918388 chr3L 17921184 17921241 opus 19 2853 6.5 13.5 10.0 1.7 2910 chr3L 17918331 intergenic not near genes chr3L 17919786 intergenic not near genes chr3L 17921241 intergenic not near genes chr3L_19_17915001 chr3L_17915001 RAL-301_125b 2856 chr3L 17918391 17918395 chr3L 17921177 17921248 opus 5 2840 5.5 12.0 8.8 0.5 2857 chr3L 17918391 intergenic not near genes chr3L 17919820 intergenic not near genes chr3L 17921248 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-301_125b 2857 chr3L 17921828 17921859 chr3L 17921965 17921996 16 136 13.5 10.0 11.8 1.2 168 chr3L 17921828 intergenic not near genes chr3L 17921912 intergenic not near genes chr3L 17921996 intergenic not near genes chr3L_16_17920001 chr3L_17920001 RAL-301_125b 2858 chr3L 18006177 18006246 chr3L 18006351 18006420 38 174 12.0 4.0 8.0 4.2 243 chr3L 18006177 intron Eip75B - chr3L 18006298 intron Eip75B - chr3L 18006420 intron Eip75B - chr3L_38_18005001 chr3L_18005001 RAL-301_125b 2859 chr3L 18013920 18013946 chr3L 18014059 18014085 15 139 22.5 0.0 11.2 1.2 165 chr3L 18013920 intron Eip75B - chr3L 18014002 intron Eip75B - chr3L 18014085 intron Eip75B - chr3L_15_18010001 chr3L_18010001 RAL-301_125b 2860 chr3L 18028202 18028272 chr3L 18028458 18028528 36 255 11.5 13.5 12.5 2.7 326 chr3L 18028202 intron Eip75B - chr3L 18028365 intron Eip75B - chr3L 18028528 intron Eip75B - chr3L_36_18025001 chr3L_18025001 RAL-301_125b 2861 chr3L 18029911 18029939 chr3L 18030038 18030066 15 127 19.0 0.0 9.5 1.4 155 chr3L 18029911 intron Eip75B - chr3L 18029988 intron Eip75B - chr3L 18030066 intron Eip75B - chr3L_15_18025001 chr3L_18025001 RAL-301_125b 2862 chr3L 18034635 18034705 chr3L 18034768 18034801 11 127 13.0 9.5 11.2 0.9 166 chr3L 18034635 intron Eip75B - chr3L 18034718 intron Eip75B - chr3L 18034801 intron Eip75B - chr3L_11_18030001 chr3L_18030001 RAL-301_125b 2863 chr3L 18047662 18047728 chr3L 18056768 18056834 roo 39 9106 11.0 7.0 9.0 3.9 9172 chr3L 18047662 intron Eip75B - chr3L 18052248 intron Eip75B - chr3L 18056834 intron Eip75B - chr3L_39_18050001 chr3L_18050001 RAL-301_125b 2864 chr3L 18064011 18064077 chr3L 18064147 18064213 33 136 4.0 8.0 6.0 4.7 202 chr3L 18064011 intron Eip75B - chr3L 18064112 intron Eip75B - chr3L 18064213 intron Eip75B - chr3L_33_18060001 chr3L_18060001 RAL-301_125b 2865 chr3L 18077105 18077142 chr3L 18077250 18077287 15 145 10.0 8.0 9.0 1.5 182 chr3L 18077105 intergenic CR45392 + chr3L 18077196 intergenic CR45392 + chr3L 18077287 intergenic CR45392 + chr3L_15_18075001 chr3L_18075001 RAL-301_125b 2866 chr3L 18093914 18093987 chr3L 18094085 18094149 35 171 6.5 6.5 6.5 4.7 235 chr3L 18093914 intron CG13698 - chr3L 18094032 intron CG13698 - chr3L 18094149 intron CG13698 - chr3L_35_18090001 chr3L_18090001 RAL-301_125b 2867 chr3L 18106212 18106283 chr3L 18106381 18106412 22 156 8.0 2.0 5.0 3.7 200 chr3L 18106212 intergenic CG13698 -,mRpS26 + chr3L 18106312 intergenic CG13698 -,mRpS26 + chr3L 18106412 intergenic mRpS26 +,CG13698 - chr3L_22_18105001 chr3L_18105001 RAL-301_125b 2868 chr3L 18113266 18113284 chr3L 18113413 18113431 8 147 4.0 15.0 9.5 0.8 165 chr3L 18113266 intron,intron CG32195 +,CG7341 + chr3L 18113348 intron,intron CG32195 +,CG7341 + chr3L 18113431 intron,intron CG32195 +,CG7341 + chr3L_8_18110001 chr3L_18110001 RAL-301_125b 2869 chr3L 18118167 18118238 chr3L 18118295 18118366 29 127 8.0 6.5 7.2 3.5 199 chr3L 18118167 3` UTR,intron CG32195 +,CG7341 + chr3L 18118266 3` UTR,intron CG32195 +,CG7341 + chr3L 18118366 3` UTR,intron CG32195 +,CG7341 + chr3L_29_18115001 chr3L_18115001 RAL-301_125b 2870 chr3L 18132987 18133028 chr3L 18133127 18133168 19 140 8.0 0.0 4.0 3.8 181 chr3L 18132987 intergenic Cyp312a1 - chr3L 18133078 intergenic Cyp312a1 - chr3L 18133168 intergenic Cyp312a1 - chr3L_19_18130001 chr3L_18130001 RAL-301_125b 2871 chr3L 18150356 18150414 chr3L 18150507 18150578 15 151 10.5 0.0 5.2 2.4 222 chr3L 18150356 intron CG7330 + chr3L 18150467 intron CG7330 + chr3L 18150578 intron CG7330 + chr3L_15_18150001 chr3L_18150001 RAL-301_125b 2872 chr3L 18163935 18164194 chr3L 18164187 18164411 24 246 0.0 0.0 0.0 24.0 476 chr3L 18163935 intergenic not near genes chr3L 18164173 intergenic not near genes chr3L 18164411 intergenic not near genes chr3L_24_18160001 chr3L_18160001 RAL-301_125b 2873 chr3L 18164198 18164240 chr3L 18164415 18164464 6 222 0.0 0.0 0.0 6.0 266 chr3L 18164198 intergenic not near genes chr3L 18164331 intergenic not near genes chr3L 18164464 intergenic not near genes chr3L_6_18160001 chr3L_18160001 RAL-301_125b 2874 chr3L 18172642 18172704 chr3L 18172768 18172830 30 126 12.5 11.5 12.0 2.3 188 chr3L 18172642 intron W - chr3L 18172736 intron W - chr3L 18172830 intron W - chr3L_30_18170001 chr3L_18170001 RAL-301_125b 2875 chr3L 18175765 18175835 chr3L 18176054 18176124 43 288 11.0 5.5 8.2 4.7 359 chr3L 18175765 intron W - chr3L 18175944 intron W - chr3L 18176124 intron W - chr3L_43_18175001 chr3L_18175001 RAL-301_125b 2876 chr3L 18186584 18186619 chr3L 18186773 18186808 10 189 15.0 5.5 10.2 0.9 224 chr3L 18186584 intergenic not near genes chr3L 18186696 intergenic not near genes chr3L 18186808 intergenic not near genes chr3L_10_18185001 chr3L_18185001 RAL-301_125b 2877 chr3L 18189547 18189582 chr3L 18190198 18190230 S-element 17 650 12.5 10.5 11.5 1.4 683 chr3L 18189547 intergenic not near genes chr3L 18189888 intergenic not near genes chr3L 18190230 intergenic not near genes chr3L_17_18185001 chr3L_18185001 RAL-301_125b 2878 chr3L 18198930 18198931 chr3L 24821492 24821494 10 6622563 54.0 34.5 44.2 0.2 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_10_21510001 chr3L_21510001 RAL-301_125b 2879 chr3L 18203555 18203628 chr3L 18203700 18203762 12 137 4.5 0.0 2.2 3.8 207 chr3L 18203555 exon CG7320 + chr3L 18203658 intergenic CG7320 + chr3L 18203762 intergenic CG7320 + chr3L_12_18200001 chr3L_18200001 RAL-301_125b 2880 chr3L 18220191 18220228 chr3L 18220636 18220673 19 445 5.5 11.5 8.5 2.0 482 chr3L 18220191 intergenic not near genes chr3L 18220432 intergenic not near genes chr3L 18220673 intergenic not near genes chr3L_19_18220001 chr3L_18220001 RAL-301_125b 2881 chr3L 18223114 18223187 chr3L 18223247 18223332 20 140 5.0 0.5 2.8 5.3 218 chr3L 18223114 intergenic not near genes chr3L 18223223 intergenic not near genes chr3L 18223332 intergenic not near genes chr3L_20_18220001 chr3L_18220001 RAL-301_125b 2882 chr3L 18226620 18226627 chr3L 18226761 18226768 4 141 10.5 11.5 11.0 0.3 148 chr3L 18226620 intergenic not near genes chr3L 18226694 intergenic not near genes chr3L 18226768 intergenic not near genes chr3L_4_18225001 chr3L_18225001 RAL-301_125b 2883 chr3L 18248908 18248977 chr3L 18249056 18249125 16 148 6.0 8.5 7.2 2.0 217 chr3L 18248908 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249125 intergenic not near genes chr3L_16_18245001 chr3L_18245001 RAL-301_125b 2884 chr3L 18262423 18262489 chr3L 18262555 18262623 29 132 10.0 7.0 8.5 3.1 200 chr3L 18262423 intergenic not near genes chr3L 18262523 intergenic not near genes chr3L 18262623 intergenic not near genes chr3L_29_18260001 chr3L_18260001 RAL-301_125b 2885 chr3L 18295532 18295607 chr3L 18295655 18295713 25 127 5.0 6.0 5.5 3.8 181 chr3L 18295532 5` UTR CR43306 + chr3L 18295622 5` UTR CR43306 + chr3L 18295713 5` UTR CR43306 + chr3L_25_18295001 chr3L_18295001 RAL-301_125b 2886 chr3L 18301302 18301380 chr3L 18301439 18301519 27 139 2.0 6.5 4.2 5.2 217 chr3L 18301302 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301519 intergenic CG13700 - chr3L_27_18300001 chr3L_18300001 RAL-301_125b 2887 chr3L 18306898 18306909 chr3L 18306989 18307037 4 119 3.0 8.5 5.8 0.6 139 chr3L 18306898 intergenic not near genes chr3L 18306968 intergenic not near genes chr3L 18307037 intergenic not near genes chr3L_4_18305001 chr3L_18305001 RAL-301_125b 2888 chr3L 18326752 18326818 chr3L 18326910 18326986 32 162 5.5 12.0 8.8 3.3 234 chr3L 18326752 intergenic not near genes chr3L 18326869 intergenic not near genes chr3L 18326986 intergenic not near genes chr3L_32_18325001 chr3L_18325001 RAL-301_125b 2889 chr3L 18342092 18342102 chr3L 18342222 18342232 7 130 1.0 16.0 8.5 0.7 140 chr3L 18342092 intergenic not near genes chr3L 18342162 intergenic not near genes chr3L 18342232 intergenic not near genes chr3L_7_18340001 chr3L_18340001 RAL-301_125b 2890 chr3L 18343357 18343538 chr3L 18343486 18343675 32 143 0.0 0.0 0.0 32.0 318 chr3L 18343357 intergenic not near genes chr3L 18343516 intergenic not near genes chr3L 18343675 intergenic not near genes chr3L_32_18340001 chr3L_18340001 RAL-301_125b 2891 chr3L 18383049 18383126 chr3L 18383183 18383258 18 133 4.5 7.5 6.0 2.6 209 chr3L 18383049 intergenic not near genes chr3L 18383154 intergenic not near genes chr3L 18383258 intergenic not near genes chr3L_18_18380001 chr3L_18380001 RAL-301_125b 2892 chr3L 18406084 18406154 chr3L 18406210 18406280 23 125 4.5 6.5 5.5 3.5 196 chr3L 18406084 intergenic not near genes chr3L 18406182 intergenic not near genes chr3L 18406280 intergenic not near genes chr3L_23_18405001 chr3L_18405001 RAL-301_125b 2893 chr3L 18408688 18408758 chr3L 18408824 18408894 27 136 6.0 6.5 6.2 3.8 206 chr3L 18408688 intergenic not near genes chr3L 18408791 intergenic not near genes chr3L 18408894 intergenic not near genes chr3L_27_18405001 chr3L_18405001 RAL-301_125b 2894 chr3L 9013690 9013693 chr3L 18417066 18417066 7 9403374 29.0 32.5 30.8 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_7_13715001 chr3L_13715001 RAL-301_125b 2895 chr3L 9307795 9307796 chr3L 18417066 18417066 8 9109271 28.5 32.5 30.5 0.3 9109271 chr3L 9307795 intergenic not near genes chr3L 13862430 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_8_13860001 chr3L_13860001 RAL-301_125b 2896 chr3L 18417066 18417066 chr3L 19220634 19220637 9 803570 32.5 36.5 34.5 0.3 803571 chr3L 18417066 intergenic not near genes chr3L 18818852 intron CG14073 - chr3L 19220637 intron fz2 - chr3L_9_18815001 chr3L_18815001 RAL-301_125b 2897 chr3L 18423705 18423711 chr3L 18423836 18423842 4 131 6.5 6.0 6.2 0.6 137 chr3L 18423705 intergenic not near genes chr3L 18423774 intergenic not near genes chr3L 18423842 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-301_125b 2898 chr3L 18436016 18436082 chr3L 18436164 18436230 25 148 9.0 8.5 8.8 2.6 214 chr3L 18436016 intergenic not near genes chr3L 18436123 intergenic not near genes chr3L 18436230 intergenic not near genes chr3L_25_18435001 chr3L_18435001 RAL-301_125b 2899 chr3L 18448575 18448619 chr3L 18448717 18448761 20 142 11.0 8.5 9.8 1.9 186 chr3L 18448575 intergenic not near genes chr3L 18448668 intergenic not near genes chr3L 18448761 intergenic not near genes chr3L_20_18445001 chr3L_18445001 RAL-301_125b 2900 chr3L 18456232 18456301 chr3L 18456370 18456439 27 137 8.0 11.0 9.5 2.6 207 chr3L 18456232 intergenic CR44670 - chr3L 18456336 intergenic CR44670 - chr3L 18456439 3` UTR CR44670 - chr3L_27_18455001 chr3L_18455001 RAL-301_125b 2901 chr3L 18464440 18464513 chr3L 18464573 18464649 22 134 6.0 6.5 6.2 3.1 209 chr3L 18464440 intergenic not near genes chr3L 18464544 intergenic not near genes chr3L 18464649 intergenic not near genes chr3L_22_18460001 chr3L_18460001 RAL-301_125b 2902 chr3L 18506092 18506153 chr3L 18509605 18509666 F-element 22 3512 12.5 12.0 12.2 1.7 3574 chr3L 18506092 intergenic not near genes chr3L 18507879 intergenic not near genes chr3L 18509666 intergenic not near genes chr3L_22_18505001 chr3L_18505001 RAL-301_125b 2903 chr3L 18528583 18528652 chr3L 18537794 18537863 roo 38 9211 10.5 6.5 8.5 4.0 9280 chr3L 18528583 intergenic not near genes chr3L 18533223 intergenic not near genes chr3L 18537863 intergenic not near genes chr3L_38_18530001 chr3L_18530001 RAL-301_125b 2904 chr3L 18546654 18546662 chr3L 18546798 18546800 6 143 14.5 7.0 10.8 0.5 146 chr3L 18546654 intergenic not near genes chr3L 18546727 intergenic not near genes chr3L 18546800 intergenic not near genes chr3L_6_18545001 chr3L_18545001 RAL-301_125b 2905 chr3L 18546663 18546729 chr3L 18546796 18546868 22 141 3.5 6.5 5.0 3.7 205 chr3L 18546663 intergenic not near genes chr3L 18546766 intergenic not near genes chr3L 18546868 intergenic not near genes chr3L_22_18545001 chr3L_18545001 RAL-301_125b 2906 chr3L 18593907 18593978 chr3L 18595937 18595993 Doc 18 2030 5.0 3.0 4.0 3.6 2086 chr3L 18593907 intergenic term - chr3L 18594950 intergenic not near genes chr3L 18595993 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-301_125b 2907 chr3L 18599654 18599679 chr3L 18599782 18599807 15 126 19.0 7.5 13.2 1.1 153 chr3L 18599654 intergenic CG13380 -,CG4174 - chr3L 18599730 intergenic CG13380 -,CG4174 - chr3L 18599807 intergenic CG13380 -,CG4174 - chr3L_15_18595001 chr3L_18595001 RAL-301_125b 2908 chr3L 18602579 18602663 chr3L 18602713 18602797 7 134 4.5 0.0 2.2 2.2 218 chr3L 18602579 intron,intron CG13380 -,CG4174 - chr3L 18602688 intron,intron CG13380 -,CG4174 - chr3L 18602797 intron,intron CG13380 -,CG4174 - chr3L_7_18600001 chr3L_18600001 RAL-301_125b 2909 chr3L 18638538 18638603 chr3L 18638682 18638747 24 144 4.5 7.0 5.8 3.5 209 chr3L 18638538 intron MYPT-75D + chr3L 18638642 intron MYPT-75D + chr3L 18638747 intron MYPT-75D + chr3L_24_18635001 chr3L_18635001 RAL-301_125b 2910 chr3L 18653025 18653071 chr3L 18653195 18653242 12 170 0.0 10.5 5.2 1.9 217 chr3L 18653025 intron MYPT-75D + chr3L 18653134 intron MYPT-75D + chr3L 18653242 intron MYPT-75D + chr3L_12_18650001 chr3L_18650001 RAL-301_125b 2911 chr3L 18678498 18678547 chr3L 18678749 18678824 21 262 0.0 1.0 0.5 14.0 326 chr3L 18678498 intergenic not near genes chr3L 18678661 intergenic not near genes chr3L 18678824 intergenic not near genes chr3L_21_18675001 chr3L_18675001 RAL-301_125b 2912 chr3L 18688135 18688153 chr3L 18688269 18688283 9 141 16.5 17.5 17.0 0.5 148 chr3L 18688135 intergenic not near genes chr3L 18688209 intergenic not near genes chr3L 18688283 intergenic not near genes chr3L_9_18685001 chr3L_18685001 RAL-301_125b 2913 chr3L 18701089 18701152 chr3L 18701227 18701290 17 136 7.5 4.5 6.0 2.4 201 chr3L 18701089 intergenic not near genes chr3L 18701190 intergenic not near genes chr3L 18701290 intergenic not near genes chr3L_17_18700001 chr3L_18700001 RAL-301_125b 2914 chr3L 18710743 18710787 chr3L 18718743 18718787 Stalker2 20 8000 11.5 14.0 12.8 1.4 8044 chr3L 18710743 intergenic not near genes chr3L 18714765 intergenic not near genes chr3L 18718787 intergenic not near genes chr3L_20_18710001 chr3L_18710001 RAL-301_125b 2915 chr3L 18721726 18721798 chr3L 18721867 18721939 24 139 8.0 7.5 7.8 2.7 213 chr3L 18721726 intergenic CG12477 - chr3L 18721832 intergenic CG12477 - chr3L 18721939 3` UTR CG12477 - chr3L_24_18720001 chr3L_18720001 RAL-301_125b 2916 chr3L 18738614 18738691 chr3L 18738752 18738829 31 137 2.5 7.0 4.8 5.3 215 chr3L 18738614 intergenic not near genes chr3L 18738722 intergenic not near genes chr3L 18738829 intergenic not near genes chr3L_31_18735001 chr3L_18735001 RAL-301_125b 2917 chr3L 18739327 18739400 chr3L 18739476 18739549 28 149 8.5 7.0 7.8 3.2 222 chr3L 18739327 intergenic not near genes chr3L 18739438 intergenic not near genes chr3L 18739549 intergenic not near genes chr3L_28_18735001 chr3L_18735001 RAL-301_125b 2918 chr3L 18741949 18741971 chr3L 18742085 18742107 15 136 22.5 10.0 16.2 0.9 158 chr3L 18741949 intergenic not near genes chr3L 18742028 intergenic not near genes chr3L 18742107 intergenic not near genes chr3L_15_18740001 chr3L_18740001 RAL-301_125b 2919 chr3L 18753498 18753562 chr3L 18753630 18753694 23 132 7.0 5.0 6.0 3.3 196 chr3L 18753498 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753694 intron ftz-f1 - chr3L_23_18750001 chr3L_18750001 RAL-301_125b 2920 chr3L 18772369 18772431 chr3L 18781100 18781162 roo 41 8730 8.0 14.0 11.0 3.4 8793 chr3L 18772369 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781162 intron ftz-f1 - chr3L_41_18775001 chr3L_18775001 RAL-301_125b 2921 chr3L 18784348 18784406 chr3L 18784487 18784522 32 138 13.0 14.0 13.5 2.2 174 chr3L 18784348 intron ftz-f1 - chr3L 18784435 intron ftz-f1 - chr3L 18784522 intron ftz-f1 - chr3L_32_18780001 chr3L_18780001 RAL-301_125b 2922 chr3L 18810120 18810174 chr3L 18810252 18810306 25 132 10.0 11.5 10.8 2.1 186 chr3L 18810120 intron CG14073 - chr3L 18810213 intron CG14073 - chr3L 18810306 intron CG14073 - chr3L_25_18810001 chr3L_18810001 RAL-301_125b 2923 chr3L 18833741 18833803 chr3L 18834955 18835017 1360 17 1214 9.0 5.5 7.2 2.1 1276 chr3L 18833741 intron Indy - chr3L 18834379 intron Indy - chr3L 18835017 intron Indy - chr3L_17_18830001 chr3L_18830001 RAL-301_125b 2924 chr3L 18839706 18839720 chr3L 18839839 18839853 7 133 0.0 7.5 3.8 1.5 147 chr3L 18839706 intron Indy - chr3L 18839780 intron Indy - chr3L 18839853 intron Indy - chr3L_7_18835001 chr3L_18835001 RAL-301_125b 2925 chr3L 18839725 18839763 chr3L 18839838 18839906 12 138 0.0 7.5 3.8 2.5 181 chr3L 18839725 intron Indy - chr3L 18839816 intron Indy - chr3L 18839906 intron Indy - chr3L_12_18835001 chr3L_18835001 RAL-301_125b 2926 chr3L 18856540 18856596 chr3L 18856694 18856750 17 153 6.5 8.5 7.5 2.0 210 chr3L 18856540 intergenic CR45388 + chr3L 18856645 intergenic CR45388 + chr3L 18856750 intergenic CR45388 + chr3L_17_18855001 chr3L_18855001 RAL-301_125b 2927 chr3L 18896761 18896768 chr3L 18896946 18896953 4 185 9.0 16.5 12.8 0.3 192 chr3L 18896761 intron CG3902 - chr3L 18896857 intron CG3902 - chr3L 18896953 intron CG3902 - chr3L_4_18895001 chr3L_18895001 RAL-301_125b 2928 chr3L 18896770 18896783 chr3L 18896942 18896968 5 178 5.0 16.0 10.5 0.4 198 chr3L 18896770 intron CG3902 - chr3L 18896869 intron CG3902 - chr3L 18896968 intron CG3902 - chr3L_5_18895001 chr3L_18895001 RAL-301_125b 2929 chr3L 18924431 18924504 chr3L 18924557 18924630 28 126 7.0 7.5 7.2 3.4 199 chr3L 18924431 intron CG32204 - chr3L 18924530 intron CG32204 - chr3L 18924630 intron CG32204 - chr3L_28_18920001 chr3L_18920001 RAL-301_125b 2930 chr3L 18933583 18933660 chr3L 18933727 18933803 19 143 8.0 10.0 9.0 1.9 220 chr3L 18933583 intron CG32204 - chr3L 18933693 intron CG32204 - chr3L 18933803 intron CG32204 - chr3L_19_18930001 chr3L_18930001 RAL-301_125b 2931 chr3L 18957243 18957323 chr3L 18957374 18957454 33 125 9.0 10.5 9.8 3.1 211 chr3L 18957243 intergenic not near genes chr3L 18957348 intergenic not near genes chr3L 18957454 intergenic not near genes chr3L_33_18955001 chr3L_18955001 RAL-301_125b 2932 chr3L 18969499 18969577 chr3L 18969625 18969696 40 126 10.0 9.5 9.8 3.7 197 chr3L 18969499 intergenic not near genes chr3L 18969598 intergenic not near genes chr3L 18969696 intergenic not near genes chr3L_40_18965001 chr3L_18965001 RAL-301_125b 2933 chr3L 18988153 18988200 chr3L 18988283 18988300 25 126 11.5 16.5 14.0 1.7 147 chr3L 18988153 exon CG11619 - chr3L 18988226 5` UTR CG11619 - chr3L 18988300 5` UTR CG11619 - chr3L_25_18985001 chr3L_18985001 RAL-301_125b 2934 chr3L 19086556 19086615 chr3L 19086697 19086756 19 140 6.5 4.0 5.2 3.1 200 chr3L 19086556 intergenic Mkp3 - chr3L 19086656 intergenic Mkp3 - chr3L 19086756 intergenic Mkp3 - chr3L_19_19085001 chr3L_19085001 RAL-301_125b 2935 chr3L 19111360 19111409 chr3L 19111495 19111543 15 135 7.0 7.5 7.2 1.8 183 chr3L 19111360 intron CG14082 - chr3L 19111452 intron CG14082 - chr3L 19111543 intron CG14082 - chr3L_15_19110001 chr3L_19110001 RAL-301_125b 2936 chr3L 19115601 19115668 chr3L 19115816 19115897 BS 26 227 8.0 6.0 7.0 3.2 296 chr3L 19115601 intron CG14082 - chr3L 19115749 intron CG14082 - chr3L 19115897 intron CG14082 - chr3L_26_19115001 chr3L_19115001 RAL-301_125b 2937 chr3L 19116999 19117069 chr3L 19124496 19124561 mdg1 35 7495 9.0 13.0 11.0 2.9 7562 chr3L 19116999 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124561 intron CG14082 - chr3L_35_19120001 chr3L_19120001 RAL-301_125b 2938 chr3L 19182338 19182412 chr3L 19182469 19182543 31 131 7.0 9.0 8.0 3.4 205 chr3L 19182338 intron fz2 - chr3L 19182440 intron fz2 - chr3L 19182543 intron fz2 - chr3L_31_19180001 chr3L_19180001 RAL-301_125b 2939 chr3L 19208012 19208087 chr3L 19209436 19209511 Doc 23 1420 8.0 8.0 8.0 2.6 1499 chr3L 19208012 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209511 intron fz2 - chr3L_23_19205001 chr3L_19205001 RAL-301_125b 2940 chr3L 19220632 19220633 chr3L 22908066 22908067 16 3687433 35.5 44.5 40.0 0.4 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_16_21060001 chr3L_21060001 RAL-301_125b 2941 chr3L 19220635 19220636 chr3L 22908066 22908067 9 3687431 35.5 44.5 40.0 0.2 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-301_125b 2942 chr3L 9307795 9307796 chr3L 19220637 19220637 5 9912841 28.5 36.0 32.2 0.2 9912842 chr3L 9307795 intergenic not near genes chr3L 14264216 intergenic not near genes chr3L 19220637 intron fz2 - chr3L_5_14260001 chr3L_14260001 RAL-301_125b 2943 chr3L 19220637 19220637 chr3L 22908066 22908066 6 3687429 34.5 44.5 39.5 0.1 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-301_125b 2944 chr3L 19336949 19337007 chr3L 19337085 19337143 12 136 6.5 8.5 7.5 1.4 194 chr3L 19336949 intron pip - chr3L 19337046 intron pip - chr3L 19337143 intron pip - chr3L_12_19335001 chr3L_19335001 RAL-301_125b 2945 chr3L 19342711 19342775 chr3L 19342852 19342916 29 141 6.0 7.0 6.5 3.9 205 chr3L 19342711 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342916 3` UTR CG32206 - chr3L_29_19340001 chr3L_19340001 RAL-301_125b 2946 chr3L 19346818 19346876 chr3L 19346954 19347005 23 134 1.0 13.5 7.2 2.8 187 chr3L 19346818 intron CG32206 - chr3L 19346912 intron CG32206 - chr3L 19347005 intron CG32206 - chr3L_23_19345001 chr3L_19345001 RAL-301_125b 2947 chr3L 19377752 19377825 chr3L 19378488 19378561 29 735 6.0 11.5 8.8 3.0 809 chr3L 19377752 intron CG32206 - chr3L 19378156 intron CG32206 - chr3L 19378561 intron CG32206 - chr3L_29_19375001 chr3L_19375001 RAL-301_125b 2948 chr3L 19398895 19398932 chr3L 19403662 19403699 F-element 15 4766 8.0 6.0 7.0 1.9 4804 chr3L 19398895 intron CG32206 - chr3L 19401297 intron CG32206 - chr3L 19403699 intron CG32206 - chr3L_15_19400001 chr3L_19400001 RAL-301_125b 2949 chr3L 19404933 19405004 chr3L 19405060 19405116 33 127 9.0 10.5 9.8 3.1 183 chr3L 19404933 intron CG32206 - chr3L 19405024 intron CG32206 - chr3L 19405116 intron CG32206 - chr3L_33_19405001 chr3L_19405001 RAL-301_125b 2950 chr3L 19430354 19430430 chr3L 19430482 19430558 37 128 15.0 10.0 12.5 2.7 204 chr3L 19430354 intergenic not near genes chr3L 19430456 intergenic not near genes chr3L 19430558 intergenic not near genes chr3L_37_19430001 chr3L_19430001 RAL-301_125b 2951 chr3L 19437013 19437045 chr3L 19437147 19437179 15 134 8.0 12.5 10.2 1.3 166 chr3L 19437013 intergenic not near genes chr3L 19437096 intergenic not near genes chr3L 19437179 intergenic not near genes chr3L_15_19435001 chr3L_19435001 RAL-301_125b 2952 chr3L 19439215 19439289 chr3L 19439354 19439420 19 138 7.0 12.0 9.5 1.8 205 chr3L 19439215 intergenic not near genes chr3L 19439318 intergenic not near genes chr3L 19439420 intergenic not near genes chr3L_19_19435001 chr3L_19435001 RAL-301_125b 2953 chr3L 19461973 19462047 chr3L 19462138 19462212 35 165 7.5 9.0 8.2 3.8 239 chr3L 19461973 intergenic not near genes chr3L 19462092 intergenic not near genes chr3L 19462212 intergenic not near genes chr3L_35_19460001 chr3L_19460001 RAL-301_125b 2954 chr3L 19479300 19479374 chr3L 19479428 19479475 30 124 8.0 11.0 9.5 2.9 175 chr3L 19479300 intergenic not near genes chr3L 19479388 intergenic not near genes chr3L 19479475 intergenic not near genes chr3L_30_19475001 chr3L_19475001 RAL-301_125b 2955 chr3L 19488478 19488500 chr3L 19488610 19488632 8 132 8.5 18.0 13.2 0.6 154 chr3L 19488478 intergenic pncr009:3L -,CG32212 + chr3L 19488555 intergenic pncr009:3L -,CG32212 + chr3L 19488632 intergenic pncr009:3L -,CG32212 + chr3L_8_19485001 chr3L_19485001 RAL-301_125b 2956 chr3L 19518784 19518843 chr3L 19518925 19518974 23 140 7.0 12.5 9.8 2.1 190 chr3L 19518784 intergenic Cpr76Ba - chr3L 19518879 intergenic not near genes chr3L 19518974 intergenic not near genes chr3L_23_19515001 chr3L_19515001 RAL-301_125b 2957 chr3L 19527878 19527944 chr3L 19528007 19528073 33 128 12.5 7.0 9.8 3.1 195 chr3L 19527878 intergenic not near genes chr3L 19527976 intergenic not near genes chr3L 19528073 intergenic not near genes chr3L_33_19525001 chr3L_19525001 RAL-301_125b 2958 chr3L 19554771 19554847 chr3L 19554916 19554991 24 143 7.0 9.5 8.2 2.6 220 chr3L 19554771 intergenic CG9300 + chr3L 19554881 intergenic CG9300 + chr3L 19554991 intergenic CG9300 + chr3L_24_19550001 chr3L_19550001 RAL-301_125b 2959 chr3L 19792334 19792362 chr3L 19792479 19792507 15 145 18.0 29.5 23.8 0.6 173 chr3L 19792334 intron,intron CG42637 -,Gyc76C - chr3L 19792420 intron,intron CG42637 -,Gyc76C - chr3L 19792507 intron,intron CG42637 -,Gyc76C - chr3L_15_19790001 chr3L_19790001 RAL-301_125b 2960 chr3L 19818568 19818585 chr3L 19819216 19819232 5 647 63.0 32.5 47.8 0.1 664 chr3L 19818568 exon Deaf1 + chr3L 19818900 intron Deaf1 + chr3L 19819232 exon Deaf1 + chr3L_5_19815001 chr3L_19815001 RAL-301_125b 2961 chr3L 19818588 19818618 chr3L 19819212 19819257 8 636 55.0 31.0 43.0 0.2 669 chr3L 19818588 exon Deaf1 + chr3L 19818922 intron Deaf1 + chr3L 19819257 exon Deaf1 + chr3L_8_19815001 chr3L_19815001 RAL-301_125b 2962 chr3L 19819924 19819988 chr3L 19828315 19828356 412 13 8384 23.5 48.0 35.8 0.4 8432 chr3L 19819924 exon Deaf1 + chr3L 19824140 intron Deaf1 + chr3L 19828356 exon Deaf1 + chr3L_13_19820001 chr3L_19820001 RAL-301_125b 2963 chr3L 19820248 19820319 chr3L 19827847 19827918 412 45 7599 6.5 11.5 9.0 4.5 7670 chr3L 19820248 intron Deaf1 + chr3L 19824083 intron Deaf1 + chr3L 19827918 intron Deaf1 + chr3L_45_19820001 chr3L_19820001 RAL-301_125b 2964 chr3L 19848466 19848519 chr3L 19857706 19857759 roo 18 9240 12.0 14.0 13.0 1.3 9293 chr3L 19848466 intron Papss + chr3L 19853112 intron Papss + chr3L 19857759 intron Papss + chr3L_18_19850001 chr3L_19850001 RAL-301_125b 2965 chr3L 19861787 19861847 chr3L 19863625 19863685 S-element 32 1838 7.5 11.0 9.2 3.1 1898 chr3L 19861787 5` UTR CR45433 + chr3L 19862736 intergenic not near genes chr3L 19863685 intergenic not near genes chr3L_32_19860001 chr3L_19860001 RAL-301_125b 2966 chr3L 19903060 19903116 chr3L 19903200 19903226 17 134 9.0 9.0 9.0 1.7 166 chr3L 19903060 intron,intron Mi-2 -,Su(Tpl) - chr3L 19903143 intron,intron Mi-2 -,Su(Tpl) - chr3L 19903226 intron,intron Mi-2 -,Su(Tpl) - chr3L_17_19900001 chr3L_19900001 RAL-301_125b 2967 chr3L 19961219 19961378 chr3L 19961346 19961509 47 127 0.5 0.0 0.2 39.2 290 chr3L 19961219 intron Ac76E + chr3L 19961364 intron Ac76E + chr3L 19961509 intron Ac76E + chr3L_47_19960001 chr3L_19960001 RAL-301_125b 2968 chr3L 19981160 19981235 chr3L 19981290 19981365 21 129 6.0 6.5 6.2 2.9 205 chr3L 19981160 intergenic not near genes chr3L 19981262 intergenic CG17732 + chr3L 19981365 intergenic CG17732 + chr3L_21_19980001 chr3L_19980001 RAL-301_125b 2969 chr3L 20069105 20069172 chr3L 20069238 20069305 31 129 7.0 4.5 5.8 4.6 200 chr3L 20069105 intron sNPF-R - chr3L 20069205 intron sNPF-R - chr3L 20069305 intron sNPF-R - chr3L_31_20065001 chr3L_20065001 RAL-301_125b 2970 chr3L 20083405 20083424 chr3L 20083521 20083555 4 122 20.0 21.5 20.8 0.2 150 chr3L 20083405 intron sNPF-R - chr3L 20083480 intron sNPF-R - chr3L 20083555 intron sNPF-R - chr3L_4_20080001 chr3L_20080001 RAL-301_125b 2971 chr3L 20096044 20096110 chr3L 20096198 20096242 9 149 6.5 0.0 3.2 2.1 198 chr3L 20096044 intergenic not near genes chr3L 20096143 intergenic not near genes chr3L 20096242 intergenic not near genes chr3L_9_20095001 chr3L_20095001 RAL-301_125b 2972 chr3L 20113613 20113678 chr3L 20122920 20122985 roo 32 9307 11.5 12.5 12.0 2.5 9372 chr3L 20113613 intergenic not near genes chr3L 20118299 intergenic not near genes chr3L 20122985 intergenic not near genes chr3L_32_20115001 chr3L_20115001 RAL-301_125b 2973 chr3L 20143040 20143105 chr3L 20143170 20143235 24 130 8.5 9.5 9.0 2.4 195 chr3L 20143040 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143235 intergenic not near genes chr3L_24_20140001 chr3L_20140001 RAL-301_125b 2974 chr3L 20147630 20147719 chr3L 20147776 20147840 30 135 8.0 6.0 7.0 3.8 210 chr3L 20147630 intergenic not near genes chr3L 20147735 intergenic not near genes chr3L 20147840 intergenic not near genes chr3L_30_20145001 chr3L_20145001 RAL-301_125b 2975 chr3L 20148248 20148315 chr3L 20148388 20148455 20 138 7.0 7.0 7.0 2.5 207 chr3L 20148248 intergenic not near genes chr3L 20148352 intergenic not near genes chr3L 20148455 intergenic not near genes chr3L_20_20145001 chr3L_20145001 RAL-301_125b 2976 chr3L 20156115 20156120 chr3L 20156287 20156292 6 171 25.5 9.0 17.2 0.3 177 chr3L 20156115 intron CG42674 - chr3L 20156204 intron CG42674 - chr3L 20156292 intron CG42674 - chr3L_6_20155001 chr3L_20155001 RAL-301_125b 2977 chr3L 20156125 20156190 chr3L 20156286 20156340 25 169 7.5 8.5 8.0 2.8 215 chr3L 20156125 intron CG42674 - chr3L 20156232 intron CG42674 - chr3L 20156340 intron CG42674 - chr3L_25_20155001 chr3L_20155001 RAL-301_125b 2978 chr3L 20212562 20212586 chr3L 20218189 20218213 mdg3 13 5627 17.0 14.5 15.8 0.8 5651 chr3L 20212562 intergenic CG7017 - chr3L 20215388 intergenic not near genes chr3L 20218213 intergenic CG6933 - chr3L_13_20215001 chr3L_20215001 RAL-301_125b 2979 chr3L 20256593 20256669 chr3L 20256760 20256836 33 166 4.5 9.0 6.8 4.2 243 chr3L 20256593 exon rdgC + chr3L 20256714 intron rdgC + chr3L 20256836 intron rdgC + chr3L_33_20255001 chr3L_20255001 RAL-301_125b 2980 chr3L 20267147 20267224 chr3L 20267857 20267876 31 704 7.5 11.0 9.2 3.0 729 chr3L 20267147 exon CG32228 + chr3L 20267512 exon CG32228 + chr3L 20267876 exon CG32228 + chr3L_31_20265001 chr3L_20265001 RAL-301_125b 2981 chr3L 20283627 20283707 chr3L 20283761 20283841 42 133 6.5 5.0 5.8 6.2 214 chr3L 20283627 intron gogo - chr3L 20283734 intron gogo - chr3L 20283841 intron gogo - chr3L_42_20280001 chr3L_20280001 RAL-301_125b 2982 chr3L 20321112 20321141 chr3L 20342868 20342905 17.6 12 21759 20.0 37.5 28.8 0.4 21793 chr3L 20321112 exon Spn77Bb + chr3L 20332008 intergenic not near genes chr3L 20342905 exon Spn77Bc + chr3L_12_20330001 chr3L_20330001 RAL-301_125b 2983 chr3L 20344243 20344256 chr3L 20344383 20344396 INE-1 7 140 8.0 15.0 11.5 0.6 153 chr3L 20344243 3` UTR Spn77Bc + chr3L 20344320 intergenic Spn77Bc + chr3L 20344396 intergenic Spn77Bc + chr3L_7_20340001 chr3L_20340001 RAL-301_125b 2984 chr3L 20386890 20386963 chr3L 20387042 20387115 34 152 9.5 13.5 11.5 2.7 225 chr3L 20386890 intron fbl + chr3L 20387002 intron fbl + chr3L 20387115 intron fbl + chr3L_34_20385001 chr3L_20385001 RAL-301_125b 2985 chr3L 20462537 20462601 chr3L 20462668 20462732 36 131 11.0 9.0 10.0 3.3 195 chr3L 20462537 intron atk - chr3L 20462634 intron atk - chr3L 20462732 intron atk - chr3L_36_20460001 chr3L_20460001 RAL-301_125b 2986 chr3L 20476715 20476771 chr3L 20484364 20484420 springer 25 7649 7.5 12.0 9.8 2.3 7705 chr3L 20476715 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484420 3` UTR ZnT77C - chr3L_25_20480001 chr3L_20480001 RAL-301_125b 2987 chr3L 20487620 20487673 chr3L 20488121 20488154 INE-1 23 499 10.5 9.5 10.0 2.1 534 chr3L 20487620 intron ZnT77C - chr3L 20487887 intron ZnT77C - chr3L 20488154 exon ZnT77C - chr3L_23_20485001 chr3L_20485001 RAL-301_125b 2988 chr3L 20525228 20525228 chr3L 22908066 22908067 15 2382838 35.0 44.5 39.8 0.4 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_15_21715001 chr3L_21715001 RAL-301_125b 2989 chr3L 20525228 20525228 chr3L 24821493 24821493 6 4296265 35.0 34.5 34.8 0.2 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_6_22670001 chr3L_22670001 RAL-301_125b 2990 chr3L 20525229 20525229 chr3L 22908066 22908067 11 2382838 35.0 44.5 39.8 0.3 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_11_21715001 chr3L_21715001 RAL-301_125b 2991 chr3L 20525229 20525229 chr3L 24821492 24821494 8 4296264 35.0 34.5 34.8 0.2 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_8_22670001 chr3L_22670001 RAL-301_125b 2992 chr3L 20525230 20525230 chr3L 22908066 22908067 4 2382837 35.0 44.5 39.8 0.1 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-301_125b 2993 chr3L 20525230 20525230 chr3L 24821493 24821494 5 4296264 35.0 34.5 34.8 0.1 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-301_125b 2994 chr3L 20548316 20548381 chr3L 20548455 20548520 25 139 8.0 6.5 7.2 3.0 204 chr3L 20548316 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548520 intergenic not near genes chr3L_25_20545001 chr3L_20545001 RAL-301_125b 2995 chr3L 20590018 20590027 chr3L 20590607 20590615 412 4 586 19.5 7.0 13.2 0.3 597 chr3L 20590018 intergenic not near genes chr3L 20590316 intergenic not near genes chr3L 20590615 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-301_125b 2996 chr3L 20590048 20590092 chr3L 20590605 20590681 412 15 580 4.5 5.5 5.0 2.5 633 chr3L 20590048 intergenic not near genes chr3L 20590364 intergenic not near genes chr3L 20590681 intergenic not near genes chr3L_15_20590001 chr3L_20590001 RAL-301_125b 2997 chr3L 20616135 20616168 chr3L 20616387 20616415 13 251 0.5 19.0 9.8 1.2 280 chr3L 20616135 intron knrl - chr3L 20616275 intron knrl - chr3L 20616415 intron knrl - chr3L_13_20615001 chr3L_20615001 RAL-301_125b 2998 chr3L 20635013 20635028 chr3L 20635115 20635140 4 110 10.0 13.0 11.5 0.3 127 chr3L 20635013 intergenic CR44682 + chr3L 20635076 intergenic CR44682 + chr3L 20635140 intergenic CR44682 + chr3L_4_20635001 chr3L_20635001 RAL-301_125b 2999 chr3L 20645556 20645605 chr3L 20645693 20645742 24 136 14.5 6.0 10.2 2.1 186 chr3L 20645556 intergenic not near genes chr3L 20645649 intergenic not near genes chr3L 20645742 intergenic not near genes chr3L_24_20645001 chr3L_20645001 RAL-301_125b 3000 chr3L 20710716 20710722 chr3L 20710843 20710849 7 127 20.5 8.0 14.2 0.5 133 chr3L 20710716 intergenic not near genes chr3L 20710782 intergenic not near genes chr3L 20710849 intergenic not near genes chr3L_7_20710001 chr3L_20710001 RAL-301_125b 3001 chr3L 20710723 20710792 chr3L 20710850 20710894 26 123 9.0 9.5 9.2 2.5 171 chr3L 20710723 intergenic not near genes chr3L 20710808 intergenic not near genes chr3L 20710894 intergenic not near genes chr3L_26_20710001 chr3L_20710001 RAL-301_125b 3002 chr3L 20723259 20723283 chr3L 20723393 20723417 11 134 22.0 9.5 15.8 0.7 158 chr3L 20723259 intergenic not near genes chr3L 20723338 intergenic not near genes chr3L 20723417 intergenic not near genes chr3L_11_20720001 chr3L_20720001 RAL-301_125b 3003 chr3L 20723285 20723325 chr3L 20723387 20723459 26 132 9.0 8.5 8.8 2.7 174 chr3L 20723285 intergenic not near genes chr3L 20723372 intergenic not near genes chr3L 20723459 intergenic not near genes chr3L_26_20720001 chr3L_20720001 RAL-301_125b 3004 chr3L 20752577 20752647 chr3L 20755539 20755604 21 2962 7.5 10.5 9.0 2.1 3027 chr3L 20752577 intergenic not near genes chr3L 20754090 intergenic not near genes chr3L 20755604 intron CG33912 - chr3L_21_20750001 chr3L_20750001 RAL-301_125b 3005 chr3L 20896880 20896936 chr3L 20897009 20897014 30 127 7.0 14.0 10.5 2.6 134 chr3L 20896880 3` UTR Sfp77F - chr3L 20896947 3` UTR Sfp77F - chr3L 20897014 3` UTR Sfp77F - chr3L_30_20895001 chr3L_20895001 RAL-301_125b 3006 chr3L 21014874 21014897 chr3L 21023400 21023428 Tirant 12 8524 20.5 11.5 16.0 0.7 8554 chr3L 21014874 intron skd - chr3L 21019151 intron skd - chr3L 21023428 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-301_125b 3007 chr3L 21014903 21014923 chr3L 21023399 21023454 Tirant 9 8522 13.5 11.5 12.5 0.7 8551 chr3L 21014903 intron skd - chr3L 21019178 intron skd - chr3L 21023454 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-301_125b 3008 chr3L 21014925 21014945 chr3L 21023396 21023446 Tirant 8 8505 6.0 11.5 8.8 0.8 8521 chr3L 21014925 intron skd - chr3L 21019186 intron skd - chr3L 21023446 intron skd - chr3L_8_21015001 chr3L_21015001 RAL-301_125b 3009 chr3L 21082162 21082231 chr3L 21082290 21082359 31 128 7.0 10.0 8.5 3.3 197 chr3L 21082162 intron ko - chr3L 21082260 intron ko - chr3L 21082359 intron ko - chr3L_31_21080001 chr3L_21080001 RAL-301_125b 3010 chr3L 21087764 21087798 chr3L 21087931 21087964 12 166 22.0 11.5 16.8 0.7 200 chr3L 21087764 intron ko - chr3L 21087864 intron ko - chr3L 21087964 intron ko - chr3L_12_21085001 chr3L_21085001 RAL-301_125b 3011 chr3L 21087802 21087829 chr3L 21087928 21087996 6 149 13.0 11.0 12.0 0.5 194 chr3L 21087802 intron ko - chr3L 21087899 intron ko - chr3L 21087996 intron ko - chr3L_6_21085001 chr3L_21085001 RAL-301_125b 3012 chr3L 21145264 21145290 chr3L 21145394 21145420 13 130 16.0 7.0 11.5 1.0 156 chr3L 21145264 intron Ac78C - chr3L 21145342 intron Ac78C - chr3L 21145420 intron Ac78C - chr3L_13_21145001 chr3L_21145001 RAL-301_125b 3013 chr3L 21150887 21150959 chr3L 21151073 21151132 32 185 5.5 11.0 8.2 3.5 245 chr3L 21150887 intron Ac78C - chr3L 21151010 intron Ac78C - chr3L 21151132 intron Ac78C - chr3L_32_21150001 chr3L_21150001 RAL-301_125b 3014 chr3L 21151825 21151882 chr3L 21156959 21157016 flea 17 5134 10.0 8.5 9.2 1.7 5191 chr3L 21151825 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21157016 intron Ac78C - chr3L_17_21150001 chr3L_21150001 RAL-301_125b 3015 chr3L 21160919 21160932 chr3L 21161065 21161077 9 146 19.0 6.5 12.8 0.7 158 chr3L 21160919 5` UTR Ac78C - chr3L 21160998 5` UTR Ac78C - chr3L 21161077 intron Ac78C - chr3L_9_21160001 chr3L_21160001 RAL-301_125b 3016 chr3L 21160934 21160988 chr3L 21161064 21161092 22 142 7.0 6.5 6.8 2.8 158 chr3L 21160934 5` UTR Ac78C - chr3L 21161013 intron Ac78C - chr3L 21161092 intron Ac78C - chr3L_22_21160001 chr3L_21160001 RAL-301_125b 3017 chr3L 21170016 21170027 chr3L 21170286 21170303 5 271 26.0 7.0 16.5 0.3 287 chr3L 21170016 intron Ac78C - chr3L 21170160 intron Ac78C - chr3L 21170303 intron Ac78C - chr3L_5_21170001 chr3L_21170001 RAL-301_125b 3018 chr3L 21170028 21170087 chr3L 21170284 21170363 31 271 6.0 7.0 6.5 4.1 335 chr3L 21170028 intron Ac78C - chr3L 21170196 intron Ac78C - chr3L 21170363 intron Ac78C - chr3L_31_21170001 chr3L_21170001 RAL-301_125b 3019 chr3L 21243702 21243718 chr3L 21251315 21251321 412 6 7610 8.5 11.5 10.0 0.5 7619 chr3L 21243702 intron Eip78C + chr3L 21247512 intron Eip78C + chr3L 21251321 intron Eip78C + chr3L_6_21245001 chr3L_21245001 RAL-301_125b 3020 chr3L 21243721 21243750 chr3L 21251309 21251330 412 9 7582 8.0 11.5 9.8 0.8 7609 chr3L 21243721 intron Eip78C + chr3L 21247526 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_9_21245001 chr3L_21245001 RAL-301_125b 3021 chr3L 21306103 21306166 chr3L 21315312 21315375 roo 32 9209 10.5 14.0 12.2 2.4 9272 chr3L 21306103 3` UTR CG7632 + chr3L 21310739 intron Pc - chr3L 21315375 3` UTR Pc - chr3L_32_21310001 chr3L_21310001 RAL-301_125b 3022 chr3L 21319489 21319555 chr3L 21319629 21319695 34 138 8.0 10.0 9.0 3.4 206 chr3L 21319489 5` UTR Rab26 + chr3L 21319592 5` UTR Rab26 + chr3L 21319695 5` UTR Rab26 + chr3L_34_21315001 chr3L_21315001 RAL-301_125b 3023 chr3L 21406953 21407027 chr3L 21407082 21407156 32 125 18.5 13.5 16.0 1.9 203 chr3L 21406953 intron rgn + chr3L 21407054 intron rgn + chr3L 21407156 intron rgn + chr3L_32_21405001 chr3L_21405001 RAL-301_125b 3024 chr3L 21437802 21437871 chr3L 21437942 21438011 29 140 5.0 11.0 8.0 3.2 209 chr3L 21437802 3` UTR Aef1 + chr3L 21437906 3` UTR Aef1 + chr3L 21438011 3` UTR Aef1 + chr3L_29_21435001 chr3L_21435001 RAL-301_125b 3025 chr3L 21459810 21459884 chr3L 21459938 21460012 38 128 7.5 7.5 7.5 4.5 202 chr3L 21459810 intergenic not near genes chr3L 21459911 intergenic not near genes chr3L 21460012 intergenic not near genes chr3L_38_21455001 chr3L_21455001 RAL-301_125b 3026 chr3L 21466072 21466148 chr3L 21466199 21466275 30 125 5.5 5.0 5.2 4.8 203 chr3L 21466072 intergenic not near genes chr3L 21466174 intergenic not near genes chr3L 21466275 intergenic not near genes chr3L_30_21465001 chr3L_21465001 RAL-301_125b 3027 chr3L 21498831 21498854 chr3L 21500473 21500540 1360 10 1682 14.0 8.5 11.2 0.8 1709 chr3L 21498831 intron Glg1 - chr3L 21499686 intron Glg1 - chr3L 21500540 intron Glg1 - chr3L_10_21495001 chr3L_21495001 RAL-301_125b 3028 chr3L 21637285 21637346 chr3L 21637422 21637483 32 137 9.5 13.0 11.2 2.6 198 chr3L 21637285 exon CG32444 + chr3L 21637384 intron CG32444 + chr3L 21637483 intron CG32444 + chr3L_32_21635001 chr3L_21635001 RAL-301_125b 3029 chr3L 21649729 21649802 chr3L 21650003 21650076 43 273 7.0 13.5 10.2 3.8 347 chr3L 21649729 intron CG43980 + chr3L 21649902 intron CG43980 + chr3L 21650076 intron CG43980 + chr3L_43_21645001 chr3L_21645001 RAL-301_125b 3030 chr3L 21671013 21671084 chr3L 21671211 21671282 34 197 10.0 9.5 9.8 3.1 269 chr3L 21671013 intergenic not near genes chr3L 21671148 intergenic not near genes chr3L 21671282 intergenic not near genes chr3L_34_21670001 chr3L_21670001 RAL-301_125b 3031 chr3L 21736279 21736368 chr3L 21736545 21736619 23 258 0.0 6.5 3.2 5.5 340 chr3L 21736279 intergenic CR43888 + chr3L 21736449 intergenic CR43888 + chr3L 21736619 intergenic CR43888 + chr3L_23_21735001 chr3L_21735001 RAL-301_125b 3032 chr3L 21749273 21749344 chr3L 21754483 21754509 Doc 23 5206 7.5 8.0 7.8 2.6 5236 chr3L 21749273 intron Syn1 - chr3L 21751891 intron Syn1 - chr3L 21754509 intron Syn1 - chr3L_23_21750001 chr3L_21750001 RAL-301_125b 3033 chr3L 21758500 21758540 chr3L 21758847 21758887 18 348 59.5 47.0 53.2 0.3 387 chr3L 21758500 intron Syn1 - chr3L 21758694 intron Syn1 - chr3L 21758887 intron Syn1 - chr3L_18_21755001 chr3L_21755001 RAL-301_125b 3034 chr3L 21758510 21758554 chr3L 21758894 21758901 8 352 60.5 25.5 43.0 0.2 391 chr3L 21758510 intron Syn1 - chr3L 21758706 intron Syn1 - chr3L 21758901 intron Syn1 - chr3L_8_21755001 chr3L_21755001 RAL-301_125b 3035 chr3L 21769010 21769079 chr3L 21769147 21769216 37 136 10.5 12.0 11.2 3.0 206 chr3L 21769010 intron,intron Syn1 -,CG42689 + chr3L 21769113 intron,intron Syn1 -,CG42689 + chr3L 21769216 intron,intron Syn1 -,CG42689 + chr3L_37_21765001 chr3L_21765001 RAL-301_125b 3036 chr3L 21769991 21770040 chr3L 21770128 21770177 16 132 13.5 12.0 12.8 1.2 186 chr3L 21769991 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770084 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770177 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_16_21770001 chr3L_21770001 RAL-301_125b 3037 chr3L 21776627 21776868 chr3L 21776760 21776968 48 135 7.0 7.5 7.2 5.9 341 chr3L 21776627 intron,intron CG42689 +,CG42552 + chr3L 21776798 intron,intron CG42689 +,CG42552 + chr3L 21776968 exon,intron CG42689 +,CG42552 + chr3L_48_21775001 chr3L_21775001 RAL-301_125b 3038 chr3L 21809939 21809967 chr3L 21810077 21810080 12 132 18.5 18.0 18.2 0.6 141 chr3L 21809939 intron eg + chr3L 21810010 intron eg + chr3L 21810080 intron eg + chr3L_12_21810001 chr3L_21810001 RAL-301_125b 3039 chr3L 21836682 21836754 chr3L 21836818 21836890 29 136 7.5 8.0 7.8 3.3 208 chr3L 21836682 3` UTR,3` UTR Nopp140 +,P5CDh1 - chr3L 21836786 3` UTR P5CDh1 - chr3L 21836890 3` UTR P5CDh1 - chr3L_29_21835001 chr3L_21835001 RAL-301_125b 3040 chr3L 21849450 21849521 chr3L 21849582 21849653 44 131 9.0 8.0 8.5 4.6 203 chr3L 21849450 intron mub + chr3L 21849552 intron mub + chr3L 21849653 intron mub + chr3L_44_21845001 chr3L_21845001 RAL-301_125b 3041 chr3L 21852214 21852257 chr3L 21852357 21852400 6 143 9.5 8.5 9.0 0.6 186 chr3L 21852214 intron mub + chr3L 21852307 intron mub + chr3L 21852400 intron mub + chr3L_6_21850001 chr3L_21850001 RAL-301_125b 3042 chr3L 21852260 21852283 chr3L 21852351 21852426 20 132 5.5 6.5 6.0 2.9 166 chr3L 21852260 intron mub + chr3L 21852343 intron mub + chr3L 21852426 intron mub + chr3L_20_21850001 chr3L_21850001 RAL-301_125b 3043 chr3L 21874953 21875025 chr3L 21875160 21875232 28 207 7.5 8.0 7.8 3.2 279 chr3L 21874953 intron mub + chr3L 21875092 intron mub + chr3L 21875232 intron mub + chr3L_28_21875001 chr3L_21875001 RAL-301_125b 3044 chr3L 21900986 21901044 chr3L 21901129 21901167 16 141 6.5 10.0 8.2 1.7 181 chr3L 21900986 intron mub + chr3L 21901076 intron mub + chr3L 21901167 intron mub + chr3L_16_21900001 chr3L_21900001 RAL-301_125b 3045 chr3L 21952404 21952482 chr3L 21953197 21953275 transib1 37 792 6.5 8.5 7.5 4.4 871 chr3L 21952404 intergenic not near genes chr3L 21952840 intergenic not near genes chr3L 21953275 intergenic not near genes chr3L_37_21950001 chr3L_21950001 RAL-301_125b 3046 chr3L 22016325 22016392 chr3L 22016491 22016558 29 164 12.5 12.0 12.2 2.2 233 chr3L 22016325 intergenic not near genes chr3L 22016442 intergenic not near genes chr3L 22016558 intergenic not near genes chr3L_29_22015001 chr3L_22015001 RAL-301_125b 3047 chr3L 22033647 22033719 chr3L 22033775 22033847 40 128 12.0 10.0 11.0 3.3 200 chr3L 22033647 intergenic not near genes chr3L 22033747 intergenic not near genes chr3L 22033847 intergenic not near genes chr3L_40_22030001 chr3L_22030001 RAL-301_125b 3048 chr3L 22046138 22046208 chr3L 22046291 22046361 34 153 8.0 5.5 6.8 4.4 223 chr3L 22046138 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046361 intron Oct-TyrR + chr3L_34_22045001 chr3L_22045001 RAL-301_125b 3049 chr3L 22099632 22099699 chr3L 22105868 22105935 3S18 31 6235 9.5 15.5 12.5 2.3 6303 chr3L 22099632 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105935 intergenic not near genes chr3L_31_22100001 chr3L_22100001 RAL-301_125b 3050 chr3L 22124759 22124835 chr3L 22124892 22124968 32 132 6.5 10.0 8.2 3.5 209 chr3L 22124759 intergenic not near genes chr3L 22124864 intergenic not near genes chr3L 22124968 intergenic not near genes chr3L_32_22120001 chr3L_22120001 RAL-301_125b 3051 chr3L 22137488 22137532 chr3L 22137609 22137654 23 125 16.5 15.0 15.8 1.4 166 chr3L 22137488 intron olf413 + chr3L 22137571 intron olf413 + chr3L 22137654 intron olf413 + chr3L_23_22135001 chr3L_22135001 RAL-301_125b 3052 chr3L 22166396 22166472 chr3L 22166524 22166600 21 127 8.0 7.5 7.8 2.4 204 chr3L 22166396 intron olf413 + chr3L 22166498 intron olf413 + chr3L 22166600 intron olf413 + chr3L_21_22165001 chr3L_22165001 RAL-301_125b 3053 chr3L 22169408 22169480 chr3L 22169551 22169623 24 143 8.5 8.0 8.2 2.6 215 chr3L 22169408 intron olf413 + chr3L 22169516 intron olf413 + chr3L 22169623 intron olf413 + chr3L_24_22165001 chr3L_22165001 RAL-301_125b 3054 chr3L 22179082 22179096 chr3L 22179209 22179232 6 132 12.5 9.5 11.0 0.5 150 chr3L 22179082 intron olf413 + chr3L 22179157 intron olf413 + chr3L 22179232 intron olf413 + chr3L_6_22175001 chr3L_22175001 RAL-301_125b 3055 chr3L 22179098 22179118 chr3L 22179183 22179254 8 121 9.0 8.5 8.8 0.8 156 chr3L 22179098 intron olf413 + chr3L 22179176 intron olf413 + chr3L 22179254 intron olf413 + chr3L_8_22175001 chr3L_22175001 RAL-301_125b 3056 chr3L 22194281 22194317 chr3L 22194408 22194443 18 124 14.0 20.0 17.0 1.0 162 chr3L 22194281 intron olf413 + chr3L 22194362 intron olf413 + chr3L 22194443 intron olf413 + chr3L_18_22190001 chr3L_22190001 RAL-301_125b 3057 chr3L 22411344 22411396 chr3L 22411446 22411523 13 111 7.5 7.5 7.5 1.5 179 chr3L 22411344 intergenic not near genes chr3L 22411434 intergenic not near genes chr3L 22411523 intergenic not near genes chr3L_13_22410001 chr3L_22410001 RAL-301_125b 3058 chr3L 22447153 22447219 chr3L 22447294 22447360 32 141 8.0 10.0 9.0 3.2 207 chr3L 22447153 intergenic not near genes chr3L 22447256 intergenic not near genes chr3L 22447360 intergenic not near genes chr3L_32_22445001 chr3L_22445001 RAL-301_125b 3059 chr3L 22543029 22543095 chr3L 22543156 22543222 22 127 14.0 9.0 11.5 1.8 193 chr3L 22543029 intergenic not near genes chr3L 22543126 intergenic not near genes chr3L 22543222 intergenic not near genes chr3L_22_22540001 chr3L_22540001 RAL-301_125b 3060 chr3L 22554388 22554394 chr3L 22554514 22554520 4 126 15.5 11.5 13.5 0.3 132 chr3L 22554388 intergenic not near genes chr3L 22554454 intergenic not near genes chr3L 22554520 intergenic not near genes chr3L_4_22550001 chr3L_22550001 RAL-301_125b 3061 chr3L 22554402 22554447 chr3L 22554509 22554572 21 123 6.5 10.0 8.2 2.3 170 chr3L 22554402 intergenic not near genes chr3L 22554487 intergenic not near genes chr3L 22554572 intergenic not near genes chr3L_21_22550001 chr3L_22550001 RAL-301_125b 3062 chr3L 22555726 22555784 chr3L 22563245 22563304 blood 22 7517 10.0 11.0 10.5 1.9 7578 chr3L 22555726 intergenic not near genes chr3L 22559515 intergenic not near genes chr3L 22563304 intergenic not near genes chr3L_22_22555001 chr3L_22555001 RAL-301_125b 3063 chr3L 22569544 22569597 chr3L 22569677 22569745 21 147 7.5 10.0 8.8 2.1 201 chr3L 22569544 intergenic not near genes chr3L 22569644 intergenic not near genes chr3L 22569745 intergenic not near genes chr3L_21_22565001 chr3L_22565001 RAL-301_125b 3064 chr3L 22577582 22577606 chr3L 22582419 22582444 Doc 10 4836 18.0 9.0 13.5 0.7 4862 chr3L 22577582 intergenic not near genes chr3L 22580013 intergenic not near genes chr3L 22582444 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-301_125b 3065 chr3L 22577609 22577650 chr3L 22582415 22582423 Doc 12 4823 5.0 9.0 7.0 1.5 4814 chr3L 22577609 intergenic not near genes chr3L 22580016 intergenic not near genes chr3L 22582423 3` UTR CG14459 - chr3L_12_22580001 chr3L_22580001 RAL-301_125b 3066 chr3L 22617144 22617148 chr3L 22624646 22624650 blood 4 7502 17.5 9.0 13.2 0.3 7506 chr3L 22617144 intron CG14459 - chr3L 22620897 intron CG14459 - chr3L 22624650 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-301_125b 3067 chr3L 22617153 22617213 chr3L 22624645 22624715 blood 29 7502 5.5 8.5 7.0 3.6 7562 chr3L 22617153 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624715 intron CG14459 - chr3L_29_22620001 chr3L_22620001 RAL-301_125b 3068 chr3L 22625584 22625630 chr3L 22628671 22628717 5 3087 46.0 31.5 38.8 0.1 3133 chr3L 22625584 intron CG14459 - chr3L 22627150 intron CG14459 - chr3L 22628717 intron CG14459 - chr3L_5_22625001 chr3L_22625001 RAL-301_125b 3069 chr3L 22732422 22732486 chr3L 22732553 22732617 35 130 13.0 14.5 13.8 2.4 195 chr3L 22732422 intron CG11367 + chr3L 22732520 intron CG11367 + chr3L 22732617 exon CG11367 + chr3L_35_22730001 chr3L_22730001 RAL-301_125b 3070 chr3L 22756360 22756423 chr3L 22756487 22756545 24 124 10.5 11.5 11.0 2.0 185 chr3L 22756360 intron SPoCk + chr3L 22756452 intron SPoCk + chr3L 22756545 intron SPoCk + chr3L_24_22755001 chr3L_22755001 RAL-301_125b 3071 chr3L 22761344 22761403 chr3L 22766828 22766887 Ivk 24 5482 13.0 9.5 11.2 2.0 5543 chr3L 22761344 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766887 intron SPoCk + chr3L_24_22760001 chr3L_22760001 RAL-301_125b 3072 chr3L 22771592 22771660 chr3L 22771723 22771792 27 129 4.5 7.5 6.0 3.9 200 chr3L 22771592 intron SPoCk + chr3L 22771692 intron SPoCk + chr3L 22771792 intron SPoCk + chr3L_27_22770001 chr3L_22770001 RAL-301_125b 3073 chr3L 22853643 22853718 chr3L 22853779 22853854 35 136 8.5 7.5 8.0 3.9 211 chr3L 22853643 5` UTR CR43426 + chr3L 22853748 5` UTR CR43426 + chr3L 22853854 5` UTR CR43426 + chr3L_35_22850001 chr3L_22850001 RAL-301_125b 3074 chr3L 22865941 22866004 chr3L 22867124 22867187 Doc 28 1183 10.5 12.5 11.5 2.2 1246 chr3L 22865941 exon CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867187 intron CG33170 + chr3L_28_22865001 chr3L_22865001 RAL-301_125b 3075 chr3L 22897176 22897221 chr3L 22897303 22897354 26 132 0.5 11.5 6.0 3.7 178 chr3L 22897176 intergenic not near genes chr3L 22897265 intergenic not near genes chr3L 22897354 intergenic not near genes chr3L_26_22895001 chr3L_22895001 RAL-301_125b 3076 chr3L 9102764 9102789 chr3L 22908066 22908066 4 13805287 45.0 44.5 44.8 0.1 13805302 chr3L 9102764 exon bol - chr3L 16005415 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_4_16005001 chr3L_16005001 RAL-301_125b 3077 chr3L 19220633 19220636 chr3L 22908066 22908066 11 3687432 35.5 44.5 40.0 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_11_21060001 chr3L_21060001 RAL-301_125b 3078 chr3L 20525228 20525230 chr3L 22908066 22908066 31 2382837 35.0 44.5 39.8 0.8 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_31_21715001 chr3L_21715001 RAL-301_125b 3079 chr3L 22908066 22908066 chr3L 24821492 24821495 11 1913428 42.0 34.5 38.2 0.3 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_11_23860001 chr3L_23860001 RAL-301_125b 3080 chr3L 20525228 20525230 chr3L 22908067 22908067 12 2382837 35.0 44.0 39.5 0.3 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_12_21715001 chr3L_21715001 RAL-301_125b 3081 chr3L 22908067 22908067 chr3L 24821492 24821496 11 1913427 42.0 34.5 38.2 0.3 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_11_23860001 chr3L_23860001 RAL-301_125b 3082 chr3L 22989821 22989882 chr3L 22996844 22996906 297 28 7024 8.5 12.0 10.2 2.5 7085 chr3L 22989821 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996906 intergenic not near genes chr3L_28_22990001 chr3L_22990001 RAL-301_125b 3083 chr3L 23042182 23042248 chr3L 23048985 23049051 gypsy6 37 6800 12.0 9.5 10.8 3.1 6869 chr3L 23042182 intergenic not near genes chr3L 23045616 intergenic not near genes chr3L 23049051 intergenic not near genes chr3L_37_23045001 chr3L_23045001 RAL-301_125b 3084 chr3L 23088238 23088315 chr3L 23088369 23088447 34 131 10.0 11.5 10.8 2.9 209 chr3L 23088238 intergenic not near genes chr3L 23088342 intergenic not near genes chr3L 23088447 intergenic not near genes chr3L_34_23085001 chr3L_23085001 RAL-301_125b 3085 chr3L 23125985 23126042 chr3L 23126133 23126190 17 148 6.0 5.0 5.5 2.6 205 chr3L 23125985 intergenic CG33217 + chr3L 23126088 5` UTR CG33217 + chr3L 23126190 intron CG33217 + chr3L_17_23125001 chr3L_23125001 RAL-301_125b 3086 chr3L 23165870 23165907 chr3L 23173361 23173401 Quasimodo 17 7491 14.0 8.5 11.2 1.4 7531 chr3L 23165870 intergenic not near genes chr3L 23169636 intergenic not near genes chr3L 23173401 intergenic not near genes chr3L_17_23165001 chr3L_23165001 RAL-301_125b 3087 chr3L 23182220 23182294 chr3L 23182384 23182387 32 161 11.5 10.0 10.8 2.7 167 chr3L 23182220 intron CG34031 + chr3L 23182304 intron CG34031 + chr3L 23182387 intron CG34031 + chr3L_32_23180001 chr3L_23180001 RAL-301_125b 3088 chr3L 23875478 23875536 chr3L 23875609 23875667 23 127 11.0 7.0 9.0 2.3 189 chr3L 23875478 intron CG40470 - chr3L 23875572 intron CG40470 - chr3L 23875667 intron CG40470 - chr3L_23_23875001 chr3L_23875001 RAL-301_125b 3089 chr3L 24012369 24012429 chr3L 24020760 24020820 roo 21 8391 8.0 9.5 8.8 2.1 8451 chr3L 24012369 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020820 intergenic not near genes chr3L_21_24015001 chr3L_24015001 RAL-301_125b 3090 chr3L 24168586 24168619 chr3L 24176397 24176414 ZAM 9 7802 12.0 5.0 8.5 0.9 7828 chr3L 24168586 intron Snap25 + chr3L 24172500 intron Snap25 + chr3L 24176414 intron Snap25 + chr3L_9_24170001 chr3L_24170001 RAL-301_125b 3091 chr3L 24290447 24290471 chr3L 24290847 24290849 6 393 11.0 6.5 8.8 0.6 402 chr3L 24290447 intron,3` UTR Snap25 +,CR45159 - chr3L 24290648 intron,3` UTR Snap25 +,CR45159 - chr3L 24290849 intron,3` UTR Snap25 +,CR45159 - chr3L_6_24290001 chr3L_24290001 RAL-301_125b 3092 chr3L 24290475 24290511 chr3L 24290845 24290887 7 387 7.0 6.0 6.5 0.9 412 chr3L 24290475 intron,3` UTR Snap25 +,CR45159 - chr3L 24290681 intron,3` UTR Snap25 +,CR45159 - chr3L 24290887 intron Snap25 + chr3L_7_24290001 chr3L_24290001 RAL-301_125b 3093 chr3L 24791848 24791887 chr3L 24796677 24796686 Doc 11 4826 11.0 6.5 8.8 1.1 4838 chr3L 24791848 intergenic not near genes chr3L 24794267 intergenic not near genes chr3L 24796686 intergenic not near genes chr3L_11_24790001 chr3L_24790001 RAL-301_125b 3094 chr3L 20525228 20525229 chr3L 24821492 24821492 5 4296263 35.0 34.5 34.8 0.1 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-301_125b 3095 chr3L 18198931 18198931 chr3L 24821493 24821493 6 6622562 54.0 34.5 44.2 0.1 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-301_125b 3096 chr3L 20525228 20525230 chr3L 24821493 24821493 5 4296264 35.0 34.5 34.8 0.1 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-301_125b 3097 chr3L 19409897 19409897 chr3L 24821494 24821494 5 5411597 38.5 34.5 36.5 0.1 5411597 chr3L 19409897 intron CG32206 - chr3L 22115696 intergenic not near genes chr3L 24821494 intergenic not near genes chr3L_5_22115001 chr3L_22115001 RAL-301_125b 3098 chr3L 20525227 20525229 chr3L 24821494 24821494 6 4296266 35.0 34.5 34.8 0.2 4296267 chr3L 20525227 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_6_22670001 chr3L_22670001 RAL-301_125b 3099 chr3L 25331601 25331653 chr3L 25331732 25331782 11 134 3.0 6.0 4.5 2.0 181 chr3L 25331601 intergenic not near genes chr3L 25331692 intergenic not near genes chr3L 25331782 intergenic not near genes chr3L_11_25330001 chr3L_25330001 RAL-301_125b 3100 chr3L 25635666 25635736 chr3L 25635988 25636058 18 321 5.5 3.0 4.2 3.5 392 chr3L 25635666 intron CG41343 - chr3L 25635862 intron CG41343 - chr3L 25636058 intron CG41343 - chr3L_18_25635001 chr3L_25635001 RAL-301_125b 3101 chr3L 23289002 23289070 chr3L 25843633 25843701 14 2554631 48.0 52.0 50.0 0.3 2554699 chr3L 23289002 intergenic not near genes chr3L 24566352 intergenic not near genes chr3L 25843701 intron CG40178 - chr3L_14_24565001 chr3L_24565001 RAL-301_125b 3102 chr3L 26008730 26008786 chr3L 26008927 26008982 20 196 7.0 6.5 6.8 2.6 252 chr3L 26008730 intron CG40178 - chr3L 26008856 intron CG40178 - chr3L 26008982 intron CG40178 - chr3L_20_26005001 chr3L_26005001 RAL-301_125b 3103 chr3L 26704488 26704523 chr3L 26709843 26709878 Transpac 5 5355 8.5 6.5 7.5 0.6 5390 chr3L 26704488 intergenic not near genes chr3L 26707183 intergenic not near genes chr3L 26709878 intergenic not near genes chr3L_5_26705001 chr3L_26705001 RAL-301_125b 3104 chr3L 26717617 26717691 chr3L 26717743 26717817 26 126 7.0 8.0 7.5 3.1 200 chr3L 26717617 intergenic not near genes chr3L 26717717 intergenic not near genes chr3L 26717817 intergenic not near genes chr3L_26_26715001 chr3L_26715001 RAL-301_125b 3105 chr3L 27390639 27390704 chr3L 27390768 27390833 8 128 30.5 29.5 30.0 0.3 194 chr3L 27390639 intron Dbp80 + chr3L 27390736 intron Dbp80 + chr3L 27390833 intron Dbp80 + chr3L_8_27390001 chr3L_27390001 RAL-301_125b 3106 chr3L 27660726 27660791 chr3L 27660857 27660922 27 130 6.0 8.0 7.0 3.4 196 chr3L 27660726 intergenic not near genes chr3L 27660824 intergenic not near genes chr3L 27660922 intergenic not near genes chr3L_27_27660001 chr3L_27660001 RAL-301_125b 3107 chr3R 2446806 2446843 chr3R 2449005 2449054 1360 9 2201 72.0 107.0 89.5 0.1 2248 chr3R 2446806 intergenic not near genes chr3R 2447930 intergenic not near genes chr3R 2449054 intergenic not near genes chr3R_9_2445001 chr3R_2445001 RAL-301_125b 3108 chr3R 2534090 2534156 chr3R 2541709 2541770 14 7618 22.0 25.5 23.8 0.6 7680 chr3R 2534090 intergenic not near genes chr3R 2537930 intergenic not near genes chr3R 2541770 intergenic not near genes chr3R_14_2535001 chr3R_2535001 RAL-301_125b 3109 chr3R 2556898 2556934 chr3R 2557581 2557617 6 683 27.5 21.5 24.5 0.2 719 chr3R 2556898 intron CG41056 - chr3R 2557258 intron CG41056 - chr3R 2557617 intron CG41056 - chr3R_6_2555001 chr3R_2555001 RAL-301_125b 3110 chr3R 2874307 2874337 chr3R 2874413 2874462 12 132 3.5 3.5 3.5 2.7 155 chr3R 2874307 intergenic not near genes chr3R 2874384 intergenic not near genes chr3R 2874462 intergenic not near genes chr3R_12_2870001 chr3R_2870001 RAL-301_125b 3111 chr3R 3916171 3916176 chr3R 3916328 3916333 4 157 32.5 26.0 29.2 0.1 162 chr3R 3916171 intergenic not near genes chr3R 3916252 intergenic not near genes chr3R 3916333 intergenic not near genes chr3R_4_3915001 chr3R_3915001 RAL-301_125b 3112 chr3R 4063760 4063777 chr3R 4069090 4069107 6 5329 11.0 12.5 11.8 0.5 5347 chr3R 4063760 intergenic not near genes chr3R 4066434 intergenic not near genes chr3R 4069107 intergenic not near genes chr3R_6_4065001 chr3R_4065001 RAL-301_125b 3113 chr3R 4104999 4105059 chr3R 4110253 4110313 copia 15 5254 8.0 8.0 8.0 1.7 5314 chr3R 4104999 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110313 intergenic not near genes chr3R_15_4105001 chr3R_4105001 RAL-301_125b 3114 chr3R 4132852 4132927 chr3R 4133056 4133131 27 204 7.5 4.0 5.8 4.0 279 chr3R 4132852 intron Gfat1 + chr3R 4132992 intron Gfat1 + chr3R 4133131 intron Gfat1 + chr3R_27_4130001 chr3R_4130001 RAL-301_125b 3115 chr3R 4161491 4161569 chr3R 4161618 4161695 18 125 4.5 7.5 6.0 2.6 204 chr3R 4161491 3` UTR CG40198 - chr3R 4161593 3` UTR CG40198 - chr3R 4161695 exon CG40198 - chr3R_18_4160001 chr3R_4160001 RAL-301_125b 3116 chr3R 4206027 4206093 chr3R 4211652 4211718 mdg3 25 5625 9.5 10.5 10.0 2.3 5691 chr3R 4206027 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211718 intron CG14636 - chr3R_25_4205001 chr3R_4205001 RAL-301_125b 3117 chr3R 4366731 4366780 chr3R 4375164 4375213 roo 12 8433 7.0 13.0 10.0 1.1 8482 chr3R 4366731 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375213 5` UTR CR44922 + chr3R_12_4370001 chr3R_4370001 RAL-301_125b 3118 chr3R 4408371 4408424 chr3R 4412725 4412778 Juan 27 4353 13.0 18.5 15.8 1.6 4407 chr3R 4408371 intron CG32944 - chr3R 4410574 intron CG32944 - chr3R 4412778 intron CG32944 - chr3R_27_4410001 chr3R_4410001 RAL-301_125b 3119 chr3R 4557536 4557551 chr3R 4557859 4557874 8 323 22.5 7.0 14.8 0.5 338 chr3R 4557536 intron CG34357 - chr3R 4557705 intron CG34357 - chr3R 4557874 intron CG34357 - chr3R_8_4555001 chr3R_4555001 RAL-301_125b 3120 chr3R 4557559 4557605 chr3R 4557854 4557928 19 321 7.0 6.0 6.5 2.5 369 chr3R 4557559 intron CG34357 - chr3R 4557744 intron CG34357 - chr3R 4557928 intron CG34357 - chr3R_19_4555001 chr3R_4555001 RAL-301_125b 3121 chr3R 4609508 4609570 chr3R 4610722 4610784 1360 18 1214 9.5 13.0 11.2 1.5 1276 chr3R 4609508 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610784 intergenic not near genes chr3R_18_4610001 chr3R_4610001 RAL-301_125b 3122 chr3R 4661443 4661458 chr3R 4661565 4661578 6 126 21.5 1.5 11.5 0.5 135 chr3R 4661443 intron CG43427 + chr3R 4661510 intron CG43427 + chr3R 4661578 intron CG43427 + chr3R_6_4660001 chr3R_4660001 RAL-301_125b 3123 chr3R 4680665 4680726 chr3R 4680794 4680855 36 128 14.5 9.0 11.8 2.8 190 chr3R 4680665 intron CG43427 + chr3R 4680760 intron CG43427 + chr3R 4680855 intron CG43427 + chr3R_36_4680001 chr3R_4680001 RAL-301_125b 3124 chr3R 4753204 4753261 chr3R 4757557 4757614 F-element 29 4350 12.5 12.5 12.5 2.1 4410 chr3R 4753204 intron,intron atms +,CG44098 - chr3R 4755409 intron,intron atms +,CG44098 - chr3R 4757614 intron,exon atms +,CG44098 - chr3R_29_4755001 chr3R_4755001 RAL-301_125b 3125 chr3R 4759688 4759702 chr3R 4761235 4761249 hopper2 9 1547 23.0 10.5 16.8 0.5 1561 chr3R 4759688 intron,intron atms +,CG44098 - chr3R 4760468 intron,intron atms +,CG44098 - chr3R 4761249 intron,intron atms +,CG44098 - chr3R_9_4760001 chr3R_4760001 RAL-301_125b 3126 chr3R 4759704 4759742 chr3R 4761221 4761289 hopper2 26 1543 11.0 8.0 9.5 2.5 1585 chr3R 4759704 intron,intron atms +,CG44098 - chr3R 4760496 intron,intron atms +,CG44098 - chr3R 4761289 intron,intron atms +,CG44098 - chr3R_26_4760001 chr3R_4760001 RAL-301_125b 3127 chr3R 4769114 4769186 chr3R 4769242 4769314 27 127 9.5 9.5 9.5 2.6 200 chr3R 4769114 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769314 intron,intron atms +,CG44098 - chr3R_27_4765001 chr3R_4765001 RAL-301_125b 3128 chr3R 4861530 4861596 chr3R 4861650 4861717 25 126 8.5 7.0 7.8 2.8 187 chr3R 4861530 intron opa + chr3R 4861624 intron opa + chr3R 4861717 intron opa + chr3R_25_4860001 chr3R_4860001 RAL-301_125b 3129 chr3R 4887433 4887507 chr3R 4894860 4894934 rover 17 7424 6.0 6.5 6.2 2.4 7501 chr3R 4887433 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894934 intergenic not near genes chr3R_17_4890001 chr3R_4890001 RAL-301_125b 3130 chr3R 4896262 4896318 chr3R 4896394 4896461 24 142 7.5 11.5 9.5 2.3 199 chr3R 4896262 intergenic CR45580 + chr3R 4896362 intergenic CR45580 + chr3R 4896461 5` UTR CR45580 + chr3R_24_4895001 chr3R_4895001 RAL-301_125b 3131 chr3R 4948329 4948391 chr3R 4949001 4949063 32 672 43.0 20.5 31.8 1.0 734 chr3R 4948329 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949063 3` UTR UbcD6 - chr3R_32_4945001 chr3R_4945001 RAL-301_125b 3132 chr3R 4981379 4981439 chr3R 4981488 4981568 17 115 6.5 5.0 5.8 2.5 189 chr3R 4981379 intergenic not near genes chr3R 4981474 intergenic not near genes chr3R 4981568 intergenic CG14662 - chr3R_17_4980001 chr3R_4980001 RAL-301_125b 3133 chr3R 4998351 4998377 chr3R 4998503 4998524 16 152 17.5 20.0 18.8 0.8 173 chr3R 4998351 intron CG2022 - chr3R 4998438 intron CG2022 - chr3R 4998524 intron CG2022 - chr3R_16_4995001 chr3R_4995001 RAL-301_125b 3134 chr3R 5045800 5045875 chr3R 5052952 5053027 HMS-Beagle 45 7152 9.5 13.5 11.5 3.6 7227 chr3R 5045800 3` UTR CR43635 - chr3R 5049414 intergenic not near genes chr3R 5053027 intergenic CR45588 - chr3R_45_5045001 chr3R_5045001 RAL-301_125b 3135 chr3R 5067951 5068007 chr3R 5073518 5073574 mdg3 27 5567 13.5 12.5 13.0 1.9 5623 chr3R 5067951 intergenic not near genes chr3R 5070762 intergenic not near genes chr3R 5073574 intergenic not near genes chr3R_27_5070001 chr3R_5070001 RAL-301_125b 3136 chr3R 5105505 5105537 chr3R 5105638 5105649 4 120 19.0 8.5 13.8 0.3 144 chr3R 5105505 intergenic not near genes chr3R 5105577 intergenic not near genes chr3R 5105649 intergenic not near genes chr3R_4_5105001 chr3R_5105001 RAL-301_125b 3137 chr3R 5105543 5105579 chr3R 5105636 5105701 12 108 12.5 8.5 10.5 1.0 158 chr3R 5105543 intergenic not near genes chr3R 5105622 intergenic not near genes chr3R 5105701 intergenic not near genes chr3R_12_5105001 chr3R_5105001 RAL-301_125b 3138 chr3R 5188651 5188674 chr3R 5188780 5188802 6 127 21.0 16.0 18.5 0.3 151 chr3R 5188651 intron cno - chr3R 5188726 intron cno - chr3R 5188802 intron cno - chr3R_6_5185001 chr3R_5185001 RAL-301_125b 3139 chr3R 5236169 5236244 chr3R 5236347 5236422 44 177 8.0 9.0 8.5 4.6 253 chr3R 5236169 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236296 3` UTR rtp - chr3R 5236422 exon rtp - chr3R_44_5235001 chr3R_5235001 RAL-301_125b 3140 chr3R 5250856 5250908 chr3R 5251016 5251068 25 159 5.5 15.0 10.2 2.2 212 chr3R 5250856 intron CG12163 - chr3R 5250962 intron CG12163 - chr3R 5251068 intron CG12163 - chr3R_25_5250001 chr3R_5250001 RAL-301_125b 3141 chr3R 5278045 5278113 chr3R 5278176 5278239 33 131 15.0 15.5 15.2 2.0 194 chr3R 5278045 intron mtd - chr3R 5278142 intron mtd - chr3R 5278239 intron mtd - chr3R_33_5275001 chr3R_5275001 RAL-301_125b 3142 chr3R 5280141 5280159 chr3R 5280269 5280287 6 128 25.0 12.0 18.5 0.3 146 chr3R 5280141 intron mtd - chr3R 5280214 intron mtd - chr3R 5280287 intron mtd - chr3R_6_5280001 chr3R_5280001 RAL-301_125b 3143 chr3R 5282952 5282965 chr3R 5283072 5283079 8 122 17.0 14.0 15.5 0.5 127 chr3R 5282952 intron mtd - chr3R 5283016 intron mtd - chr3R 5283079 intron mtd - chr3R_8_5280001 chr3R_5280001 RAL-301_125b 3144 chr3R 5282970 5282992 chr3R 5283070 5283121 6 110 13.0 14.0 13.5 0.4 151 chr3R 5282970 intron mtd - chr3R 5283046 intron mtd - chr3R 5283121 intron mtd - chr3R_6_5280001 chr3R_5280001 RAL-301_125b 3145 chr3R 5338356 5338415 chr3R 5343583 5343642 Rt1c 34 5225 13.0 13.0 13.0 2.4 5286 chr3R 5338356 intron mtd - chr3R 5340999 intron mtd - chr3R 5343642 intron mtd - chr3R_34_5340001 chr3R_5340001 RAL-301_125b 3146 chr3R 5400465 5400474 chr3R 5400598 5400607 6 133 29.5 11.5 20.5 0.3 142 chr3R 5400465 intergenic CG2663 - chr3R 5400536 intergenic CG2663 - chr3R 5400607 3` UTR CG2663 - chr3R_6_5400001 chr3R_5400001 RAL-301_125b 3147 chr3R 5400477 5400530 chr3R 5400592 5400663 27 131 12.0 8.0 10.0 2.5 186 chr3R 5400477 intergenic CG2663 - chr3R 5400570 intergenic CG2663 - chr3R 5400663 3` UTR CG2663 - chr3R_27_5400001 chr3R_5400001 RAL-301_125b 3148 chr3R 5427907 5427971 chr3R 5431899 5431963 23 3991 10.0 8.0 9.0 2.3 4056 chr3R 5427907 intron CG14669 + chr3R 5429935 intron CG14669 + chr3R 5431963 intron CG14669 + chr3R_23_5425001 chr3R_5425001 RAL-301_125b 3149 chr3R 5436881 5436940 chr3R 5437015 5437075 26 134 8.5 7.0 7.8 3.0 194 chr3R 5436881 intron CG14669 + chr3R 5436978 intron CG14669 + chr3R 5437075 intron CG14669 + chr3R_26_5435001 chr3R_5435001 RAL-301_125b 3150 chr3R 5436941 5436950 chr3R 5437009 5437085 5 122 5.5 5.5 5.5 0.8 144 chr3R 5436941 intron CG14669 + chr3R 5437013 intron CG14669 + chr3R 5437085 intron CG14669 + chr3R_5_5435001 chr3R_5435001 RAL-301_125b 3151 chr3R 5445918 5445990 chr3R 5452428 5452500 Burdock 39 6510 12.5 10.5 11.5 3.1 6582 chr3R 5445918 intron CG14669 + chr3R 5449209 intron CG14669 + chr3R 5452500 intron CG14669 + chr3R_39_5445001 chr3R_5445001 RAL-301_125b 3152 chr3R 5622828 5622898 chr3R 5623073 5623143 32 244 8.5 9.0 8.8 3.3 315 chr3R 5622828 intron,intron Spec2 -,CG2911 - chr3R 5622986 intron,intron Spec2 -,CG2911 - chr3R 5623143 intron,intron Spec2 -,CG2911 - chr3R_32_5620001 chr3R_5620001 RAL-301_125b 3153 chr3R 5730356 5730430 chr3R 5730501 5730573 27 145 8.0 10.5 9.2 2.6 217 chr3R 5730356 intergenic not near genes chr3R 5730464 intergenic not near genes chr3R 5730573 intergenic not near genes chr3R_27_5730001 chr3R_5730001 RAL-301_125b 3154 chr3R 5745981 5746037 chr3R 5746262 5746328 pogo 33 288 11.5 10.0 10.8 2.8 347 chr3R 5745981 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746328 3` UTR Madm + chr3R_33_5745001 chr3R_5745001 RAL-301_125b 3155 chr3R 5746971 5747039 chr3R 5753212 5753280 diver 31 6241 10.5 16.0 13.2 2.2 6309 chr3R 5746971 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753280 intergenic CG2091 - chr3R_31_5750001 chr3R_5750001 RAL-301_125b 3156 chr3R 5786019 5786091 chr3R 5786201 5786273 33 180 10.0 10.5 10.2 2.9 254 chr3R 5786019 exon kat-60L1 + chr3R 5786146 intron kat-60L1 + chr3R 5786273 exon kat-60L1 + chr3R_33_5785001 chr3R_5785001 RAL-301_125b 3157 chr3R 5809068 5809084 chr3R 5809359 5809375 pogo 12 291 22.0 11.0 16.5 0.7 307 chr3R 5809068 3` UTR CG11000 + chr3R 5809222 3` UTR CG11000 + chr3R 5809375 3` UTR CG11000 + chr3R_12_5805001 chr3R_5805001 RAL-301_125b 3158 chr3R 5809088 5809136 chr3R 5809358 5809427 pogo 17 290 11.0 11.0 11.0 1.4 339 chr3R 5809088 3` UTR CG11000 + chr3R 5809258 3` UTR CG11000 + chr3R 5809427 3` UTR CG11000 + chr3R_17_5805001 chr3R_5805001 RAL-301_125b 3159 chr3R 5822343 5822406 chr3R 5823560 5823623 1360 31 1217 8.5 11.0 9.8 2.9 1280 chr3R 5822343 3` UTR CG2023 - chr3R 5822983 3` UTR CG2023 - chr3R 5823623 3` UTR CG2023 - chr3R_31_5820001 chr3R_5820001 RAL-301_125b 3160 chr3R 5836160 5836176 chr3R 5836314 5836330 15 154 28.5 28.0 28.2 0.5 170 chr3R 5836160 exon,3` UTR CG1208 +,CR45192 - chr3R 5836245 intron CG1208 + chr3R 5836330 intron CG1208 + chr3R_15_5835001 chr3R_5835001 RAL-301_125b 3161 chr3R 5896923 5896993 chr3R 5897332 5897402 31 406 11.5 10.0 10.8 2.6 479 chr3R 5896923 intron CG34113 - chr3R 5897162 intron CG34113 - chr3R 5897402 intron CG34113 - chr3R_31_5895001 chr3R_5895001 RAL-301_125b 3162 chr3R 5927520 5927578 chr3R 5927810 5927868 pogo 27 289 8.0 12.0 10.0 2.5 348 chr3R 5927520 intron CG34113 - chr3R 5927694 intron CG34113 - chr3R 5927868 intron CG34113 - chr3R_27_5925001 chr3R_5925001 RAL-301_125b 3163 chr3R 5931420 5931452 chr3R 5931558 5931590 11 134 7.0 14.0 10.5 1.0 170 chr3R 5931420 intron CG34113 - chr3R 5931505 intron CG34113 - chr3R 5931590 intron CG34113 - chr3R_11_5930001 chr3R_5930001 RAL-301_125b 3164 chr3R 5934709 5934728 chr3R 5934875 5934894 4 166 21.0 11.0 16.0 0.2 185 chr3R 5934709 intron CG34113 - chr3R 5934802 intron CG34113 - chr3R 5934894 intron CG34113 - chr3R_4_5930001 chr3R_5930001 RAL-301_125b 3165 chr3R 5934729 5934769 chr3R 5934874 5934935 19 154 11.0 11.0 11.0 1.6 206 chr3R 5934729 intron CG34113 - chr3R 5934832 intron CG34113 - chr3R 5934935 intron CG34113 - chr3R_19_5930001 chr3R_5930001 RAL-301_125b 3166 chr3R 5942421 5942496 chr3R 5942569 5942644 29 145 5.0 11.0 8.0 3.2 223 chr3R 5942421 intron CG34113 - chr3R 5942532 intron CG34113 - chr3R 5942644 intron CG34113 - chr3R_29_5940001 chr3R_5940001 RAL-301_125b 3167 chr3R 5943353 5943417 chr3R 5943482 5943546 31 128 4.0 4.5 4.2 6.0 193 chr3R 5943353 intron CG34113 - chr3R 5943450 intron CG34113 - chr3R 5943546 intron CG34113 - chr3R_31_5940001 chr3R_5940001 RAL-301_125b 3168 chr3R 6015567 6015578 chr3R 6015702 6015713 6 135 0.5 32.5 16.5 0.3 146 chr3R 6015567 intergenic not near genes chr3R 6015640 intergenic not near genes chr3R 6015713 intergenic not near genes chr3R_6_6015001 chr3R_6015001 RAL-301_125b 3169 chr3R 6015913 6015989 chr3R 6024444 6024510 Tirant 24 8526 6.5 7.0 6.8 3.1 8597 chr3R 6015913 intergenic not near genes chr3R 6020212 intergenic not near genes chr3R 6024510 intergenic not near genes chr3R_24_6020001 chr3R_6020001 RAL-301_125b 3170 chr3R 6042534 6042604 chr3R 6042681 6042721 25 141 5.0 7.5 6.2 3.5 187 chr3R 6042534 intergenic not near genes chr3R 6042628 intergenic not near genes chr3R 6042721 intergenic not near genes chr3R_25_6040001 chr3R_6040001 RAL-301_125b 3171 chr3R 6043632 6043706 chr3R 6043759 6043823 16 120 4.0 3.5 3.8 3.3 191 chr3R 6043632 intergenic not near genes chr3R 6043728 intergenic not near genes chr3R 6043823 intergenic not near genes chr3R_16_6040001 chr3R_6040001 RAL-301_125b 3172 chr3R 6121135 6121178 chr3R 6121370 6121446 BS 19 254 1.0 9.0 5.0 3.2 311 chr3R 6121135 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121446 intergenic not near genes chr3R_19_6120001 chr3R_6120001 RAL-301_125b 3173 chr3R 6141878 6141951 chr3R 6142004 6142053 27 121 12.5 13.0 12.8 2.0 175 chr3R 6141878 intergenic not near genes chr3R 6141966 intergenic not near genes chr3R 6142053 intergenic not near genes chr3R_27_6140001 chr3R_6140001 RAL-301_125b 3174 chr3R 6158487 6158507 chr3R 6167098 6167125 Tirant 11 8624 16.5 7.0 11.8 0.9 8638 chr3R 6158487 intergenic not near genes chr3R 6162806 intergenic not near genes chr3R 6167125 intergenic CG1077 + chr3R_11_6160001 chr3R_6160001 RAL-301_125b 3175 chr3R 6158517 6158540 chr3R 6167091 6167158 Tirant 4 8608 8.0 5.0 6.5 0.5 8641 chr3R 6158517 intergenic not near genes chr3R 6162838 intergenic not near genes chr3R 6167158 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-301_125b 3176 chr3R 6175138 6175192 chr3R 6182460 6182514 HMS-Beagle2 23 7321 8.5 12.0 10.2 2.1 7376 chr3R 6175138 intergenic Osi1 + chr3R 6178826 intron CR45194 + chr3R 6182514 intergenic CR45194 + chr3R_23_6175001 chr3R_6175001 RAL-301_125b 3177 chr3R 6206262 6206313 chr3R 6206507 6206575 BS 22 265 9.5 13.5 11.5 1.8 313 chr3R 6206262 exon Osi24 + chr3R 6206418 intron Osi24 + chr3R 6206575 intron Osi24 + chr3R_22_6205001 chr3R_6205001 RAL-301_125b 3178 chr3R 6343670 6343687 chr3R 6343818 6343835 4 149 16.0 10.5 13.2 0.3 165 chr3R 6343670 exon CG10298 + chr3R 6343752 3` UTR CG10298 + chr3R 6343835 intergenic CG10298 +,CG17919 + chr3R_4_6340001 chr3R_6340001 RAL-301_125b 3179 chr3R 6420943 6420997 chr3R 6421104 6421132 16 159 3.0 1.5 2.2 5.0 189 chr3R 6420943 intron gpp + chr3R 6421038 intron gpp + chr3R 6421132 intron gpp + chr3R_16_6420001 chr3R_6420001 RAL-301_125b 3180 chr3R 6461548 6461600 chr3R 6461678 6461730 25 130 5.0 13.5 9.2 2.5 182 chr3R 6461548 intergenic not near genes chr3R 6461639 intergenic not near genes chr3R 6461730 intergenic not near genes chr3R_25_6460001 chr3R_6460001 RAL-301_125b 3181 chr3R 6509982 6510049 chr3R 6515113 6515164 jockey 27 5129 8.0 8.5 8.2 2.9 5182 chr3R 6509982 intergenic not near genes chr3R 6512573 intergenic not near genes chr3R 6515164 intergenic not near genes chr3R_27_6510001 chr3R_6510001 RAL-301_125b 3182 chr3R 6519067 6519144 chr3R 6519225 6519305 23 160 5.0 7.0 6.0 3.3 238 chr3R 6519067 intergenic not near genes chr3R 6519186 intergenic not near genes chr3R 6519305 intergenic not near genes chr3R_23_6515001 chr3R_6515001 RAL-301_125b 3183 chr3R 6538155 6538230 chr3R 6538303 6538354 31 141 7.5 11.0 9.2 3.0 199 chr3R 6538155 intron dpr11 - chr3R 6538254 intron dpr11 - chr3R 6538354 exon dpr11 - chr3R_31_6535001 chr3R_6535001 RAL-301_125b 3184 chr3R 6550275 6550350 chr3R 6550406 6550481 40 128 7.5 8.0 7.8 4.5 206 chr3R 6550275 intron dpr11 - chr3R 6550378 intron dpr11 - chr3R 6550481 intron dpr11 - chr3R_40_6550001 chr3R_6550001 RAL-301_125b 3185 chr3R 6551076 6551078 chr3R 6551219 6551222 5 144 18.0 15.5 16.8 0.3 146 chr3R 6551076 intron dpr11 - chr3R 6551149 intron dpr11 - chr3R 6551222 intron dpr11 - chr3R_5_6550001 chr3R_6550001 RAL-301_125b 3186 chr3R 6551086 6551135 chr3R 6551216 6551279 24 143 8.0 14.5 11.2 2.0 193 chr3R 6551086 intron dpr11 - chr3R 6551182 intron dpr11 - chr3R 6551279 intron dpr11 - chr3R_24_6550001 chr3R_6550001 RAL-301_125b 3187 chr3R 6561905 6561969 chr3R 6562039 6562103 38 134 5.5 13.0 9.2 3.7 198 chr3R 6561905 intron dpr11 - chr3R 6562004 intron dpr11 - chr3R 6562103 intron dpr11 - chr3R_38_6560001 chr3R_6560001 RAL-301_125b 3188 chr3R 6624214 6624269 chr3R 6624346 6624401 27 132 9.5 12.0 10.8 2.3 187 chr3R 6624214 intergenic not near genes chr3R 6624308 intergenic not near genes chr3R 6624401 intergenic not near genes chr3R_27_6620001 chr3R_6620001 RAL-301_125b 3189 chr3R 6624274 6624285 chr3R 6624406 6624417 4 132 7.5 25.0 16.2 0.2 143 chr3R 6624274 intergenic not near genes chr3R 6624346 intergenic not near genes chr3R 6624417 intergenic not near genes chr3R_4_6620001 chr3R_6620001 RAL-301_125b 3190 chr3R 6639859 6639933 chr3R 6639987 6640065 20 126 6.5 5.0 5.8 2.9 206 chr3R 6639859 intergenic not near genes chr3R 6639962 intergenic not near genes chr3R 6640065 intergenic not near genes chr3R_20_6635001 chr3R_6635001 RAL-301_125b 3191 chr3R 6687989 6688051 chr3R 6688201 6688263 25 212 8.0 7.0 7.5 2.9 274 chr3R 6687989 3` UTR Ccp84Ag + chr3R 6688126 intergenic Ccp84Ag + chr3R 6688263 intergenic Ccp84Ag + chr3R_25_6685001 chr3R_6685001 RAL-301_125b 3192 chr3R 6697961 6698024 chr3R 6698090 6698153 23 129 12.0 8.5 10.2 2.1 192 chr3R 6697961 intergenic not near genes chr3R 6698057 intergenic not near genes chr3R 6698153 intergenic not near genes chr3R_23_6695001 chr3R_6695001 RAL-301_125b 3193 chr3R 6737451 6737521 chr3R 6739288 6739318 Doc 27 1828 8.5 14.5 11.5 2.2 1867 chr3R 6737451 intron pb - chr3R 6738384 intron pb - chr3R 6739318 intron pb - chr3R_27_6735001 chr3R_6735001 RAL-301_125b 3194 chr3R 6773508 6773583 chr3R 6773646 6773716 24 131 6.5 7.0 6.8 3.1 208 chr3R 6773508 intron CR42721 + chr3R 6773612 intron CR42721 + chr3R 6773716 intron CR42721 + chr3R_24_6770001 chr3R_6770001 RAL-301_125b 3195 chr3R 6780409 6780478 chr3R 6780542 6780611 32 133 8.5 9.0 8.8 3.3 202 chr3R 6780409 intergenic not near genes chr3R 6780510 intergenic not near genes chr3R 6780611 intergenic not near genes chr3R_32_6780001 chr3R_6780001 RAL-301_125b 3196 chr3R 6782397 6782468 chr3R 6782526 6782577 33 128 16.0 7.0 11.5 2.6 180 chr3R 6782397 intergenic not near genes chr3R 6782487 intergenic not near genes chr3R 6782577 intergenic not near genes chr3R_33_6780001 chr3R_6780001 RAL-301_125b 3197 chr3R 6803697 6803745 chr3R 6803832 6803871 13 132 1.5 8.5 5.0 2.2 174 chr3R 6803697 intergenic not near genes chr3R 6803784 intergenic not near genes chr3R 6803871 intergenic not near genes chr3R_13_6800001 chr3R_6800001 RAL-301_125b 3198 chr3R 6807220 6807284 chr3R 6807352 6807416 31 132 10.5 10.0 10.2 2.8 196 chr3R 6807220 intergenic not near genes chr3R 6807318 intergenic not near genes chr3R 6807416 intergenic not near genes chr3R_31_6805001 chr3R_6805001 RAL-301_125b 3199 chr3R 6827975 6828035 chr3R 6828101 6828161 21 126 6.5 7.0 6.8 2.7 186 chr3R 6827975 intron Scr - chr3R 6828068 intron Scr - chr3R 6828161 intron Scr - chr3R_21_6825001 chr3R_6825001 RAL-301_125b 3200 chr3R 6856333 6856400 chr3R 6856500 6856567 29 167 6.5 7.0 6.8 3.7 234 chr3R 6856333 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856567 intergenic not near genes chr3R_29_6855001 chr3R_6855001 RAL-301_125b 3201 chr3R 6862174 6862235 chr3R 6862311 6862372 23 137 8.5 8.5 8.5 2.4 198 chr3R 6862174 intergenic not near genes chr3R 6862273 intergenic not near genes chr3R 6862372 intergenic not near genes chr3R_23_6860001 chr3R_6860001 RAL-301_125b 3202 chr3R 6891245 6891263 chr3R 6891325 6891389 10 113 4.5 10.0 7.2 1.2 144 chr3R 6891245 intergenic not near genes chr3R 6891317 intergenic not near genes chr3R 6891389 intergenic not near genes chr3R_10_6890001 chr3R_6890001 RAL-301_125b 3203 chr3R 6900700 6900724 chr3R 6900827 6900851 12 127 21.5 16.0 18.8 0.6 151 chr3R 6900700 intron Antp - chr3R 6900776 intron Antp - chr3R 6900851 intron Antp - chr3R_12_6900001 chr3R_6900001 RAL-301_125b 3204 chr3R 6912054 6912130 chr3R 6912215 6912291 14 161 7.5 2.5 5.0 2.3 237 chr3R 6912054 intron Antp - chr3R 6912172 intron Antp - chr3R 6912291 intron Antp - chr3R_14_6910001 chr3R_6910001 RAL-301_125b 3205 chr3R 6923542 6923596 chr3R 6923679 6923732 19 135 8.5 12.5 10.5 1.7 190 chr3R 6923542 intron Antp - chr3R 6923637 intron Antp - chr3R 6923732 intron Antp - chr3R_19_6920001 chr3R_6920001 RAL-301_125b 3206 chr3R 6961144 6961190 chr3R 6961272 6961319 24 127 9.5 12.0 10.8 2.0 175 chr3R 6961144 intron Antp - chr3R 6961232 intron Antp - chr3R 6961319 intron Antp - chr3R_24_6960001 chr3R_6960001 RAL-301_125b 3207 chr3R 7036725 7036784 chr3R 7036845 7036921 21 135 8.0 0.0 4.0 4.2 196 chr3R 7036725 intergenic not near genes chr3R 7036823 intergenic not near genes chr3R 7036921 intergenic not near genes chr3R_21_7035001 chr3R_7035001 RAL-301_125b 3208 chr3R 7103235 7103311 chr3R 7103361 7103419 13 107 9.0 15.0 12.0 1.0 184 chr3R 7103235 intron Alh - chr3R 7103327 intron Alh - chr3R 7103419 intron Alh - chr3R_13_7100001 chr3R_7100001 RAL-301_125b 3209 chr3R 7121693 7121734 chr3R 7121826 7121867 18 133 16.5 16.0 16.2 1.0 174 chr3R 7121693 exon Alh - chr3R 7121780 intron Alh - chr3R 7121867 intron Alh - chr3R_18_7120001 chr3R_7120001 RAL-301_125b 3210 chr3R 7126468 7126521 chr3R 7126613 7126666 28 145 10.5 10.0 10.2 2.5 198 chr3R 7126468 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126567 3` UTR CG10068 - chr3R 7126666 3` UTR CG10068 - chr3R_28_7125001 chr3R_7125001 RAL-301_125b 3211 chr3R 7173636 7173700 chr3R 7173766 7173830 39 130 13.0 11.5 12.2 3.0 194 chr3R 7173636 intron sas + chr3R 7173733 intron sas + chr3R 7173830 intron sas + chr3R_39_7170001 chr3R_7170001 RAL-301_125b 3212 chr3R 7217418 7217484 chr3R 7217689 7217756 26 271 11.5 10.0 10.8 2.2 338 chr3R 7217418 intergenic CG14605 -,CG14606 - chr3R 7217587 intergenic CG14605 - chr3R 7217756 exon CG14605 - chr3R_26_7215001 chr3R_7215001 RAL-301_125b 3213 chr3R 7312212 7312217 chr3R 7312339 7312344 5 127 7.5 8.5 8.0 0.6 132 chr3R 7312212 intergenic CR44334 - chr3R 7312278 intergenic CR44334 - chr3R 7312344 3` UTR CR44334 - chr3R_5_7310001 chr3R_7310001 RAL-301_125b 3214 chr3R 7312220 7312230 chr3R 7312337 7312357 5 123 7.5 8.0 7.8 0.6 137 chr3R 7312220 intergenic CR44334 - chr3R 7312288 intergenic CR44334 - chr3R 7312357 3` UTR CR44334 - chr3R_5_7310001 chr3R_7310001 RAL-301_125b 3215 chr3R 7447944 7448011 chr3R 7448072 7448139 26 128 10.5 5.5 8.0 2.9 195 chr3R 7447944 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448139 intergenic not near genes chr3R_26_7445001 chr3R_7445001 RAL-301_125b 3216 chr3R 7506305 7506379 chr3R 7506455 7506529 36 149 11.0 7.5 9.2 3.5 224 chr3R 7506305 intergenic not near genes chr3R 7506417 intergenic not near genes chr3R 7506529 intergenic not near genes chr3R_36_7505001 chr3R_7505001 RAL-301_125b 3217 chr3R 7590277 7590348 chr3R 7590405 7590467 30 127 8.5 7.0 7.8 3.4 190 chr3R 7590277 intron CG34127 - chr3R 7590372 intron CG34127 - chr3R 7590467 intron CG34127 - chr3R_30_7590001 chr3R_7590001 RAL-301_125b 3218 chr3R 7621482 7621555 chr3R 7621622 7621695 12 140 2.0 6.0 4.0 2.4 213 chr3R 7621482 intron CG34127 - chr3R 7621588 intron CG34127 - chr3R 7621695 intron CG34127 - chr3R_12_7620001 chr3R_7620001 RAL-301_125b 3219 chr3R 7652443 7652477 chr3R 7652604 7652640 13 159 7.0 14.5 10.8 1.1 197 chr3R 7652443 intergenic not near genes chr3R 7652542 intergenic not near genes chr3R 7652640 intergenic not near genes chr3R_13_7650001 chr3R_7650001 RAL-301_125b 3220 chr3R 7654961 7655031 chr3R 7655093 7655163 30 132 5.5 11.5 8.5 3.2 202 chr3R 7654961 intergenic not near genes chr3R 7655062 intergenic not near genes chr3R 7655163 intergenic not near genes chr3R_30_7655001 chr3R_7655001 RAL-301_125b 3221 chr3R 7677868 7677942 chr3R 7678031 7678105 42 161 10.0 8.0 9.0 4.2 237 chr3R 7677868 intron Nlg1 + chr3R 7677986 intron Nlg1 + chr3R 7678105 intron Nlg1 + chr3R_42_7675001 chr3R_7675001 RAL-301_125b 3222 chr3R 7694538 7694603 chr3R 7713649 7713714 invader3 30 19111 11.0 10.0 10.5 2.6 19176 chr3R 7694538 3` UTR Nlg1 + chr3R 7704126 intergenic not near genes chr3R 7713714 intergenic not near genes chr3R_30_7700001 chr3R_7700001 RAL-301_125b 3223 chr3R 7717195 7717216 chr3R 7717326 7717347 13 131 19.0 7.5 13.2 0.9 152 chr3R 7717195 intergenic not near genes chr3R 7717271 intergenic not near genes chr3R 7717347 intergenic not near genes chr3R_13_7715001 chr3R_7715001 RAL-301_125b 3224 chr3R 7717219 7717266 chr3R 7717325 7717398 12 129 11.5 7.5 9.5 1.1 179 chr3R 7717219 intergenic not near genes chr3R 7717308 intergenic not near genes chr3R 7717398 intergenic not near genes chr3R_12_7715001 chr3R_7715001 RAL-301_125b 3225 chr3R 7729420 7729487 chr3R 7737408 7737444 Stalker2 33 7987 11.0 9.5 10.2 2.9 8024 chr3R 7729420 intergenic not near genes chr3R 7733432 intergenic not near genes chr3R 7737444 intergenic not near genes chr3R_33_7730001 chr3R_7730001 RAL-301_125b 3226 chr3R 7738079 7738147 chr3R 7738206 7738260 31 126 10.0 11.0 10.5 2.7 181 chr3R 7738079 intergenic not near genes chr3R 7738170 intergenic not near genes chr3R 7738260 intergenic not near genes chr3R_31_7735001 chr3R_7735001 RAL-301_125b 3227 chr3R 7770928 7770997 chr3R 7779585 7779654 26 8657 66.0 45.5 55.8 0.5 8726 chr3R 7770928 3` UTR CG11286 - chr3R 7775291 intergenic not near genes chr3R 7779654 intergenic not near genes chr3R_26_7775001 chr3R_7775001 RAL-301_125b 3228 chr3R 7793297 7793326 chr3R 7793423 7793452 12 126 15.0 1.0 8.0 1.3 155 chr3R 7793297 3` UTR CG10086 + chr3R 7793374 3` UTR CG10086 + chr3R 7793452 3` UTR CG10086 + chr3R_12_7790001 chr3R_7790001 RAL-301_125b 3229 chr3R 7821671 7821740 chr3R 7821817 7821886 28 146 6.5 9.0 7.8 3.2 215 chr3R 7821671 intron CG34384 + chr3R 7821778 intron CG34384 + chr3R 7821886 intron CG34384 + chr3R_28_7820001 chr3R_7820001 RAL-301_125b 3230 chr3R 7849605 7849628 chr3R 7850822 7850845 1360 9 1217 17.5 11.5 14.5 0.6 1240 chr3R 7849605 intron CG34384 + chr3R 7850225 intron CG34384 + chr3R 7850845 intron CG34384 + chr3R_9_7850001 chr3R_7850001 RAL-301_125b 3231 chr3R 7849638 7849678 chr3R 7850815 7850849 1360 19 1208 7.0 10.0 8.5 2.0 1211 chr3R 7849638 intron CG34384 + chr3R 7850244 intron CG34384 + chr3R 7850849 intron CG34384 + chr3R_19_7850001 chr3R_7850001 RAL-301_125b 3232 chr3R 7973281 7973324 chr3R 7974393 7974436 1360 29 1112 13.0 15.0 14.0 1.9 1155 chr3R 7973281 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974436 3` UTR CD98hc - chr3R_29_7970001 chr3R_7970001 RAL-301_125b 3233 chr3R 7973326 7973338 chr3R 7974388 7974430 1360 7 1102 10.0 13.5 11.8 0.5 1104 chr3R 7973326 intergenic not near genes chr3R 7973878 intergenic not near genes chr3R 7974430 3` UTR CD98hc - chr3R_7_7970001 chr3R_7970001 RAL-301_125b 3234 chr3R 8056078 8056141 chr3R 8056205 8056264 28 131 8.5 10.0 9.2 2.7 186 chr3R 8056078 intergenic CG43060 + chr3R 8056171 intergenic CG43060 + chr3R 8056264 intergenic CG43060 + chr3R_28_8055001 chr3R_8055001 RAL-301_125b 3235 chr3R 8072805 8072835 chr3R 8072931 8072961 8 124 16.0 9.5 12.8 0.6 156 chr3R 8072805 intron mAChR-B + chr3R 8072883 intron mAChR-B + chr3R 8072961 intron mAChR-B + chr3R_8_8070001 chr3R_8070001 RAL-301_125b 3236 chr3R 8072840 8072876 chr3R 8072930 8073002 5 110 9.0 9.5 9.2 0.5 162 chr3R 8072840 intron mAChR-B + chr3R 8072921 intron mAChR-B + chr3R 8073002 intron mAChR-B + chr3R_5_8070001 chr3R_8070001 RAL-301_125b 3237 chr3R 8090515 8090561 chr3R 8094042 8094088 297 14 3524 8.5 12.5 10.5 1.2 3573 chr3R 8090515 intergenic CR44330 + chr3R 8092302 intergenic not near genes chr3R 8094088 intergenic CG7900 + chr3R_14_8090001 chr3R_8090001 RAL-301_125b 3238 chr3R 8094363 8094435 chr3R 8099718 8099789 Transpac 21 5355 13.0 11.5 12.2 1.6 5426 chr3R 8094363 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099789 intron CG7900 + chr3R_21_8095001 chr3R_8095001 RAL-301_125b 3239 chr3R 8101719 8101785 chr3R 8104847 8104919 G2 30 3132 8.5 13.0 10.8 2.5 3200 chr3R 8101719 exon CG7900 + chr3R 8103319 intron CG7900 + chr3R 8104919 3` UTR CG7900 + chr3R_30_8100001 chr3R_8100001 RAL-301_125b 3240 chr3R 8207510 8207582 chr3R 8208405 8208477 F-element 32 891 4.0 9.5 6.8 4.1 967 chr3R 8207510 intergenic not near genes chr3R 8207994 intergenic not near genes chr3R 8208477 intergenic not near genes chr3R_32_8205001 chr3R_8205001 RAL-301_125b 3241 chr3R 8339246 8339247 chr3R 21907534 21907536 10 13568288 30.5 35.0 32.8 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_10_15120001 chr3R_15120001 RAL-301_125b 3242 chr3R 8402967 8403034 chr3R 8412178 8412234 roo 25 9212 9.5 7.0 8.2 2.7 9267 chr3R 8402967 intron CG45263 - chr3R 8407600 intron CG45263 - chr3R 8412234 intron CG45263 - chr3R_25_8405001 chr3R_8405001 RAL-301_125b 3243 chr3R 8467977 8468022 chr3R 8468090 8468159 16 130 6.0 8.0 7.0 2.0 182 chr3R 8467977 intron CG45263 - chr3R 8468068 intron CG45263 - chr3R 8468159 intron CG45263 - chr3R_16_8465001 chr3R_8465001 RAL-301_125b 3244 chr3R 8534735 8534807 chr3R 8535042 8535107 29 305 9.0 3.5 6.2 4.0 372 chr3R 8534735 intergenic not near genes chr3R 8534921 intergenic not near genes chr3R 8535107 intergenic not near genes chr3R_29_8530001 chr3R_8530001 RAL-301_125b 3245 chr3R 8551391 8551426 chr3R 8551532 8551567 14 141 6.5 17.0 11.8 1.1 176 chr3R 8551391 intergenic not near genes chr3R 8551479 intergenic not near genes chr3R 8551567 intergenic not near genes chr3R_14_8550001 chr3R_8550001 RAL-301_125b 3246 chr3R 8570454 8570507 chr3R 8575149 8575223 HMS-Beagle 20 4710 4.5 5.0 4.8 3.4 4769 chr3R 8570454 intergenic not near genes chr3R 8572838 intergenic not near genes chr3R 8575223 intergenic not near genes chr3R_20_8570001 chr3R_8570001 RAL-301_125b 3247 chr3R 8601731 8601797 chr3R 8610931 8610980 roo 29 9201 13.5 13.0 13.2 2.0 9249 chr3R 8601731 intron 5-HT2B + chr3R 8606356 intron 5-HT2B + chr3R 8610980 intron 5-HT2B + chr3R_29_8605001 chr3R_8605001 RAL-301_125b 3248 chr3R 8642379 8642418 chr3R 8642506 8642545 6 122 11.0 8.0 9.5 0.6 166 chr3R 8642379 intergenic not near genes chr3R 8642462 intergenic not near genes chr3R 8642545 intergenic not near genes chr3R_6_8640001 chr3R_8640001 RAL-301_125b 3249 chr3R 8642421 8642447 chr3R 8642503 8642538 13 110 7.5 8.0 7.8 1.5 117 chr3R 8642421 intergenic not near genes chr3R 8642480 intergenic not near genes chr3R 8642538 intergenic not near genes chr3R_13_8640001 chr3R_8640001 RAL-301_125b 3250 chr3R 8685245 8685313 chr3R 8685395 8685463 34 149 7.0 6.0 6.5 4.5 218 chr3R 8685245 intron CR44937 - chr3R 8685354 intron CR44937 - chr3R 8685463 intron CR44937 - chr3R_34_8685001 chr3R_8685001 RAL-301_125b 3251 chr3R 8707312 8707388 chr3R 8709803 8709879 jockey 32 2489 8.5 8.5 8.5 3.4 2567 chr3R 8707312 intergenic not near genes chr3R 8708596 intergenic not near genes chr3R 8709879 intergenic not near genes chr3R_32_8705001 chr3R_8705001 RAL-301_125b 3252 chr3R 8807560 8807618 chr3R 8807702 8807760 31 142 12.0 12.0 12.0 2.4 200 chr3R 8807560 3` UTR hng2 + chr3R 8807660 intergenic hng2 + chr3R 8807760 intergenic hng2 + chr3R_31_8805001 chr3R_8805001 RAL-301_125b 3253 chr3R 8868762 8868785 chr3R 8872641 8872676 297 7 3887 16.5 7.0 11.8 0.5 3914 chr3R 8868762 intron pyd - chr3R 8870719 intron pyd - chr3R 8872676 intron pyd - chr3R_7_8870001 chr3R_8870001 RAL-301_125b 3254 chr3R 8898178 8898207 chr3R 8913808 8913828 297 8 15629 11.5 6.5 9.0 0.8 15650 chr3R 8898178 intron pyd - chr3R 8906003 intron pyd - chr3R 8913828 intron pyd - chr3R_8_8905001 chr3R_8905001 RAL-301_125b 3255 chr3R 8917850 8917873 chr3R 8917980 8918003 12 130 15.0 6.5 10.8 1.0 153 chr3R 8917850 intron pyd - chr3R 8917926 intron pyd - chr3R 8918003 intron pyd - chr3R_12_8915001 chr3R_8915001 RAL-301_125b 3256 chr3R 8917876 8917910 chr3R 8918006 8918040 17 129 6.5 17.5 12.0 1.3 164 chr3R 8917876 intron pyd - chr3R 8917958 intron pyd - chr3R 8918040 intron pyd - chr3R_17_8915001 chr3R_8915001 RAL-301_125b 3257 chr3R 9079564 9079573 chr3R 9079701 9079710 4 137 24.5 8.5 16.5 0.2 146 chr3R 9079564 intron pum - chr3R 9079637 intron pum - chr3R 9079710 intron pum - chr3R_4_9075001 chr3R_9075001 RAL-301_125b 3258 chr3R 9081996 9082009 chr3R 9082140 9082153 11 143 29.0 6.0 17.5 0.6 157 chr3R 9081996 intron pum - chr3R 9082074 intron pum - chr3R 9082153 intron pum - chr3R_11_9080001 chr3R_9080001 RAL-301_125b 3259 chr3R 9082010 9082067 chr3R 9082136 9082211 35 140 7.5 6.0 6.8 4.5 201 chr3R 9082010 intron pum - chr3R 9082110 intron pum - chr3R 9082211 intron pum - chr3R_35_9080001 chr3R_9080001 RAL-301_125b 3260 chr3R 9094327 9094398 chr3R 9094712 9094783 28 384 8.0 6.5 7.2 3.4 456 chr3R 9094327 intron pum - chr3R 9094555 intron pum - chr3R 9094783 intron pum - chr3R_28_9090001 chr3R_9090001 RAL-301_125b 3261 chr3R 9108828 9108884 chr3R 9108946 9109010 19 126 6.0 8.0 7.0 2.4 182 chr3R 9108828 intron pum - chr3R 9108919 intron pum - chr3R 9109010 intron pum - chr3R_19_9105001 chr3R_9105001 RAL-301_125b 3262 chr3R 9164587 9164661 chr3R 9164714 9164785 37 115 5.0 9.0 7.0 4.6 198 chr3R 9164587 intron pum - chr3R 9164686 intron pum - chr3R 9164785 intron pum - chr3R_37_9160001 chr3R_9160001 RAL-301_125b 3263 chr3R 9251392 9251449 chr3R 9251522 9251579 38 130 11.5 9.5 10.5 3.3 187 chr3R 9251392 3` UTR CG8420 + chr3R 9251486 intergenic CG8420 +,St2 + chr3R 9251579 intergenic CG8420 +,St2 + chr3R_38_9250001 chr3R_9250001 RAL-301_125b 3264 chr3R 9278742 9278806 chr3R 9284051 9284101 Rt1a 29 5306 4.5 8.5 6.5 3.9 5359 chr3R 9278742 intergenic not near genes chr3R 9281422 intergenic not near genes chr3R 9284101 intergenic not near genes chr3R_29_9280001 chr3R_9280001 RAL-301_125b 3265 chr3R 9304486 9304488 chr3R 9311823 9311825 Stalker4 6 7337 27.5 6.5 17.0 0.3 7339 chr3R 9304486 intron CG8861 - chr3R 9308156 intron CG8861 - chr3R 9311825 intron CG8861 - chr3R_6_9305001 chr3R_9305001 RAL-301_125b 3266 chr3R 9318494 9318561 chr3R 9318634 9318701 20 139 3.0 10.5 6.8 2.6 207 chr3R 9318494 intron CG8861 - chr3R 9318598 intron CG8861 - chr3R 9318701 intron CG8861 - chr3R_20_9315001 chr3R_9315001 RAL-301_125b 3267 chr3R 9319540 9319594 chr3R 9320021 9320079 jockey 35 484 11.5 14.5 13.0 2.5 539 chr3R 9319540 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320079 intron CG8861 - chr3R_35_9315001 chr3R_9315001 RAL-301_125b 3268 chr3R 9327442 9327452 chr3R 9334239 9334249 10 6797 13.5 64.0 38.8 0.3 6807 chr3R 9327442 intron CG8861 - chr3R 9330846 intergenic CG16749 - chr3R 9334249 intron CG8866 - chr3R_10_9330001 chr3R_9330001 RAL-301_125b 3269 chr3R 9327440 9327489 chr3R 9334252 9334306 10 6816 25.5 65.0 45.2 0.2 6866 chr3R 9327440 intron CG8861 - chr3R 9330873 intergenic CG16749 - chr3R 9334306 exon CG8866 - chr3R_10_9330001 chr3R_9330001 RAL-301_125b 3270 chr3R 9347813 9347828 chr3R 9347936 9347961 6 130 24.5 8.0 16.2 0.3 148 chr3R 9347813 intron CG45050 + chr3R 9347887 intron CG45050 + chr3R 9347961 intron CG45050 + chr3R_6_9345001 chr3R_9345001 RAL-301_125b 3271 chr3R 9347829 9347876 chr3R 9347929 9347946 27 127 10.0 6.0 8.0 3.0 117 chr3R 9347829 intron CG45050 + chr3R 9347888 intron CG45050 + chr3R 9347946 intron CG45050 + chr3R_27_9345001 chr3R_9345001 RAL-301_125b 3272 chr3R 9361804 9361840 chr3R 9362095 9362131 pogo 14 291 5.5 16.5 11.0 1.2 327 chr3R 9361804 3` UTR CG45050 + chr3R 9361968 3` UTR CG45050 + chr3R 9362131 3` UTR CG45050 + chr3R_14_9360001 chr3R_9360001 RAL-301_125b 3273 chr3R 9379094 9379172 chr3R 9379226 9379304 12 131 0.5 7.0 3.8 2.5 210 chr3R 9379094 intron FER - chr3R 9379199 intron FER - chr3R 9379304 intron FER - chr3R_12_9375001 chr3R_9375001 RAL-301_125b 3274 chr3R 9382769 9382842 chr3R 9382944 9383017 25 174 8.0 9.0 8.5 2.6 248 chr3R 9382769 intron FER - chr3R 9382893 intron FER - chr3R 9383017 intron FER - chr3R_25_9380001 chr3R_9380001 RAL-301_125b 3275 chr3R 9422333 9422406 chr3R 9422477 9422550 50 143 12.5 10.0 11.2 4.1 217 chr3R 9422333 intron ps + chr3R 9422442 intron ps + chr3R 9422550 intron ps + chr3R_50_9420001 chr3R_9420001 RAL-301_125b 3276 chr3R 9435033 9435106 chr3R 9435169 9435191 28 130 5.0 12.0 8.5 2.9 158 chr3R 9435033 intron ps + chr3R 9435112 intron ps + chr3R 9435191 intron ps + chr3R_28_9435001 chr3R_9435001 RAL-301_125b 3277 chr3R 9440295 9440350 chr3R 9440431 9440486 21 135 10.0 7.5 8.8 2.1 191 chr3R 9440295 intron ps + chr3R 9440390 intron ps + chr3R 9440486 intron ps + chr3R_21_9440001 chr3R_9440001 RAL-301_125b 3278 chr3R 9449561 9449566 chr3R 9449706 9449711 6 145 13.0 12.0 12.5 0.4 150 chr3R 9449561 3` UTR ps + chr3R 9449636 3` UTR ps + chr3R 9449711 3` UTR ps + chr3R_6_9445001 chr3R_9445001 RAL-301_125b 3279 chr3R 9449568 9449618 chr3R 9449702 9449763 26 144 7.5 11.0 9.2 2.5 195 chr3R 9449568 3` UTR ps + chr3R 9449666 3` UTR ps + chr3R 9449763 3` UTR ps + chr3R_26_9445001 chr3R_9445001 RAL-301_125b 3280 chr3R 9453494 9453564 chr3R 9453621 9453681 32 126 8.0 9.0 8.5 3.4 187 chr3R 9453494 3` UTR ps + chr3R 9453588 3` UTR ps + chr3R 9453681 3` UTR ps + chr3R_32_9450001 chr3R_9450001 RAL-301_125b 3281 chr3R 9644535 9644610 chr3R 9644666 9644741 27 130 4.5 5.5 5.0 4.5 206 chr3R 9644535 intron Dh44 + chr3R 9644638 intron Dh44 + chr3R 9644741 intron Dh44 + chr3R_27_9640001 chr3R_9640001 RAL-301_125b 3282 chr3R 9836837 9836891 chr3R 9836965 9837029 28 134 8.5 16.5 12.5 2.1 192 chr3R 9836837 intron Teh1 - chr3R 9836933 intron Teh1 - chr3R 9837029 intron Teh1 - chr3R_28_9835001 chr3R_9835001 RAL-301_125b 3283 chr3R 9877984 9877998 chr3R 9878115 9878136 6 134 17.0 11.5 14.2 0.4 152 chr3R 9877984 intron,intron Glut4EF +,CR45029 - chr3R 9878060 intron,intron Glut4EF +,CR45029 - chr3R 9878136 intron,3` UTR Glut4EF +,CR45029 - chr3R_6_9875001 chr3R_9875001 RAL-301_125b 3284 chr3R 9877999 9878023 chr3R 9878112 9878159 14 135 10.0 11.0 10.5 1.2 160 chr3R 9877999 intron,intron Glut4EF +,CR45029 - chr3R 9878079 intron,intron Glut4EF +,CR45029 - chr3R 9878159 intron,3` UTR Glut4EF +,CR45029 - chr3R_14_9875001 chr3R_9875001 RAL-301_125b 3285 chr3R 9885603 9885649 chr3R 9885737 9885763 21 130 6.0 14.0 10.0 1.9 160 chr3R 9885603 intron Glut4EF + chr3R 9885683 intron Glut4EF + chr3R 9885763 intron Glut4EF + chr3R_21_9885001 chr3R_9885001 RAL-301_125b 3286 chr3R 9891413 9891424 chr3R 9891603 9891614 5 190 21.0 0.5 10.8 0.4 201 chr3R 9891413 intron Glut4EF + chr3R 9891514 intron Glut4EF + chr3R 9891614 intron Glut4EF + chr3R_5_9890001 chr3R_9890001 RAL-301_125b 3287 chr3R 9891431 9891481 chr3R 9891601 9891650 7 183 11.0 0.5 5.8 1.0 219 chr3R 9891431 intron Glut4EF + chr3R 9891540 intron Glut4EF + chr3R 9891650 intron Glut4EF + chr3R_7_9890001 chr3R_9890001 RAL-301_125b 3288 chr3R 9920794 9920810 chr3R 9920941 9920956 9 147 7.0 22.5 14.8 0.6 162 chr3R 9920794 intron Glut4EF + chr3R 9920875 intron Glut4EF + chr3R 9920956 intron Glut4EF + chr3R_9_9920001 chr3R_9920001 RAL-301_125b 3289 chr3R 10073731 10073797 chr3R 10073890 10073956 35 159 10.0 9.0 9.5 3.3 225 chr3R 10073731 3` UTR nerfin-2 + chr3R 10073844 3` UTR CG5361 - chr3R 10073956 intron CG5361 - chr3R_35_10070001 chr3R_10070001 RAL-301_125b 3290 chr3R 10158447 10158516 chr3R 10158579 10158648 37 132 9.5 9.5 9.5 3.5 201 chr3R 10158447 3` UTR Invadolysin + chr3R 10158548 3` UTR Invadolysin + chr3R 10158648 3` UTR Invadolysin + chr3R_37_10155001 chr3R_10155001 RAL-301_125b 3291 chr3R 10196911 10196927 chr3R 10202948 10202964 297 8 6037 24.0 8.5 16.2 0.5 6053 chr3R 10196911 exon Syn + chr3R 10199938 intron Syn + chr3R 10202964 intron Syn + chr3R_8_10195001 chr3R_10195001 RAL-301_125b 3292 chr3R 10231740 10231814 chr3R 10237367 10237434 mdg3 36 5626 7.5 7.0 7.2 4.4 5694 chr3R 10231740 intron CG42795 + chr3R 10234587 intron CG42795 + chr3R 10237434 intron CG42795 + chr3R_36_10230001 chr3R_10230001 RAL-301_125b 3293 chr3R 10255337 10255384 chr3R 10260827 10260862 I-element 18 5489 12.5 10.5 11.5 1.4 5525 chr3R 10255337 intergenic Sirt6 -,CG3999 + chr3R 10258100 intron Sirt6 - chr3R 10260862 exon Sirt6 - chr3R_18_10255001 chr3R_10255001 RAL-301_125b 3294 chr3R 10275556 10275571 chr3R 10275683 10275698 17 126 9.5 20.0 14.8 1.1 142 chr3R 10275556 intron CG43143 + chr3R 10275627 intron CG43143 + chr3R 10275698 intron CG43143 + chr3R_17_10275001 chr3R_10275001 RAL-301_125b 3295 chr3R 10531828 10531884 chr3R 10531952 10531989 14 128 10.0 1.5 5.8 2.1 161 chr3R 10531828 intron hth - chr3R 10531908 intron hth - chr3R 10531989 intron hth - chr3R_14_10530001 chr3R_10530001 RAL-301_125b 3296 chr3R 10535285 10535343 chr3R 10535428 10535486 24 143 5.5 8.5 7.0 3.0 201 chr3R 10535285 intron hth - chr3R 10535386 intron hth - chr3R 10535486 intron hth - chr3R_24_10535001 chr3R_10535001 RAL-301_125b 3297 chr3R 10563411 10563488 chr3R 10563559 10563617 46 141 10.5 12.0 11.2 3.8 206 chr3R 10563411 intron hth - chr3R 10563514 intron hth - chr3R 10563617 intron hth - chr3R_46_10560001 chr3R_10560001 RAL-301_125b 3298 chr3R 10651767 10651836 chr3R 10651916 10651984 36 146 10.0 7.0 8.5 3.8 217 chr3R 10651767 intergenic not near genes chr3R 10651876 intergenic not near genes chr3R 10651984 intergenic not near genes chr3R_36_10650001 chr3R_10650001 RAL-301_125b 3299 chr3R 10653745 10653760 chr3R 10653868 10653888 7 127 13.5 18.0 15.8 0.4 143 chr3R 10653745 intergenic not near genes chr3R 10653816 intergenic not near genes chr3R 10653888 intergenic not near genes chr3R_7_10650001 chr3R_10650001 RAL-301_125b 3300 chr3R 10653762 10653778 chr3R 10653859 10653906 9 123 12.0 15.0 13.5 0.6 144 chr3R 10653762 intergenic not near genes chr3R 10653834 intergenic not near genes chr3R 10653906 intergenic not near genes chr3R_9_10650001 chr3R_10650001 RAL-301_125b 3301 chr3R 10668555 10668611 chr3R 10668681 10668737 18 126 13.5 7.0 10.2 1.6 182 chr3R 10668555 intergenic not near genes chr3R 10668646 intergenic not near genes chr3R 10668737 intergenic not near genes chr3R_18_10665001 chr3R_10665001 RAL-301_125b 3302 chr3R 10723717 10723754 chr3R 10723859 10723896 15 142 16.5 1.5 9.0 1.5 179 chr3R 10723717 intergenic not near genes chr3R 10723806 intergenic not near genes chr3R 10723896 intergenic not near genes chr3R_15_10720001 chr3R_10720001 RAL-301_125b 3303 chr3R 10727600 10727661 chr3R 10727730 10727791 31 129 15.0 5.5 10.2 2.8 191 chr3R 10727600 intergenic not near genes chr3R 10727696 intergenic not near genes chr3R 10727791 intergenic not near genes chr3R_31_10725001 chr3R_10725001 RAL-301_125b 3304 chr3R 10732275 10732346 chr3R 10733197 10733268 27 921 3.5 7.0 5.2 4.4 993 chr3R 10732275 intergenic not near genes chr3R 10732772 intergenic not near genes chr3R 10733268 intergenic not near genes chr3R_27_10730001 chr3R_10730001 RAL-301_125b 3305 chr3R 10745379 10745450 chr3R 10745516 10745587 24 132 7.0 5.0 6.0 3.4 208 chr3R 10745379 intron TkR86C - chr3R 10745483 intron TkR86C - chr3R 10745587 intron TkR86C - chr3R_24_10745001 chr3R_10745001 RAL-301_125b 3306 chr3R 10804035 10804052 chr3R 10804188 10804205 6 153 15.0 1.0 8.0 0.7 170 chr3R 10804035 intergenic CG14692 - chr3R 10804120 intergenic CG14692 - chr3R 10804205 intergenic CG14692 - chr3R_6_10800001 chr3R_10800001 RAL-301_125b 3307 chr3R 10804076 10804197 chr3R 10811702 10811779 17.6 8 7606 1.0 10.0 5.5 1.2 7703 chr3R 10804076 intergenic CG14692 - chr3R 10807928 intergenic not near genes chr3R 10811779 3` UTR CG14693 - chr3R_8_10805001 chr3R_10805001 RAL-301_125b 3308 chr3R 10817176 10817244 chr3R 10817309 10817377 33 133 11.5 12.0 11.8 2.6 201 chr3R 10817176 3` UTR CG4089 + chr3R 10817276 3` UTR CG4089 + chr3R 10817377 3` UTR CG4089 + chr3R_33_10815001 chr3R_10815001 RAL-301_125b 3309 chr3R 10868552 10868560 chr3R 10868680 10868682 4 126 28.0 11.0 19.5 0.2 130 chr3R 10868552 5` UTR SelR - chr3R 10868617 5` UTR SelR - chr3R 10868682 intergenic Tsp86D +,SelR - chr3R_4_10865001 chr3R_10865001 RAL-301_125b 3310 chr3R 10868585 10868625 chr3R 10868670 10868719 11 99 7.0 10.0 8.5 1.2 134 chr3R 10868585 5` UTR SelR - chr3R 10868652 intergenic SelR -,Tsp86D + chr3R 10868719 5` UTR Tsp86D + chr3R_11_10865001 chr3R_10865001 RAL-301_125b 3311 chr3R 10900406 10900474 chr3R 10900532 10900601 26 126 11.5 14.0 12.8 1.9 195 chr3R 10900406 intergenic not near genes chr3R 10900504 intergenic not near genes chr3R 10900601 intergenic not near genes chr3R_26_10900001 chr3R_10900001 RAL-301_125b 3312 chr3R 10904582 10904637 chr3R 10906756 10906762 27 2171 16.5 6.5 11.5 2.2 2180 chr3R 10904582 intergenic not near genes chr3R 10905672 intergenic not near genes chr3R 10906762 intergenic not near genes chr3R_27_10905001 chr3R_10905001 RAL-301_125b 3313 chr3R 10906785 10906851 chr3R 10906911 10906977 38 122 6.0 12.0 9.0 3.8 192 chr3R 10906785 intergenic not near genes chr3R 10906881 intergenic not near genes chr3R 10906977 intergenic not near genes chr3R_38_10905001 chr3R_10905001 RAL-301_125b 3314 chr3R 10919640 10919714 chr3R 10919768 10919842 39 127 10.0 11.0 10.5 3.4 202 chr3R 10919640 intergenic not near genes chr3R 10919741 intergenic not near genes chr3R 10919842 intergenic not near genes chr3R_39_10915001 chr3R_10915001 RAL-301_125b 3315 chr3R 10920002 10920073 chr3R 10920130 10920201 38 128 12.0 10.0 11.0 3.2 199 chr3R 10920002 intergenic not near genes chr3R 10920102 intergenic not near genes chr3R 10920201 intergenic not near genes chr3R_38_10920001 chr3R_10920001 RAL-301_125b 3316 chr3R 10957818 10957883 chr3R 10963257 10963314 Rt1c 17 5430 9.0 6.5 7.8 1.9 5496 chr3R 10957818 intergenic not near genes chr3R 10960566 intergenic not near genes chr3R 10963314 intergenic not near genes chr3R_17_10960001 chr3R_10960001 RAL-301_125b 3317 chr3R 10979604 10979675 chr3R 10979736 10979807 15 131 8.0 6.5 7.2 1.8 203 chr3R 10979604 intron CG34114 + chr3R 10979706 intron CG34114 + chr3R 10979807 intron CG34114 + chr3R_15_10975001 chr3R_10975001 RAL-301_125b 3318 chr3R 10994238 10994305 chr3R 10994367 10994434 31 128 7.0 8.5 7.8 3.5 196 chr3R 10994238 intron CG34114 + chr3R 10994336 intron CG34114 + chr3R 10994434 intron CG34114 + chr3R_31_10990001 chr3R_10990001 RAL-301_125b 3319 chr3R 11024141 11024209 chr3R 11024277 11024324 21 139 3.5 8.5 6.0 3.0 183 chr3R 11024141 intron CG34114 + chr3R 11024232 intron CG34114 + chr3R 11024324 intron CG34114 + chr3R_21_11020001 chr3R_11020001 RAL-301_125b 3320 chr3R 11052042 11052063 chr3R 11052171 11052187 11 129 10.0 2.0 6.0 1.6 145 chr3R 11052042 intergenic not near genes chr3R 11052114 intergenic not near genes chr3R 11052187 intergenic not near genes chr3R_11_11050001 chr3R_11050001 RAL-301_125b 3321 chr3R 11056845 11056897 chr3R 11056973 11057023 11 128 11.5 1.0 6.2 1.5 178 chr3R 11056845 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11057023 intergenic not near genes chr3R_11_11055001 chr3R_11055001 RAL-301_125b 3322 chr3R 11065565 11065612 chr3R 11071258 11071314 297 9 5699 6.0 8.5 7.2 1.1 5749 chr3R 11065565 intergenic not near genes chr3R 11068440 intergenic not near genes chr3R 11071314 intergenic not near genes chr3R_9_11065001 chr3R_11065001 RAL-301_125b 3323 chr3R 11085410 11085480 chr3R 11085537 11085607 8 127 5.0 7.5 6.2 1.1 197 chr3R 11085410 3` UTR CR44940 - chr3R 11085508 intergenic CR44940 - chr3R 11085607 intergenic CR44940 - chr3R_8_11085001 chr3R_11085001 RAL-301_125b 3324 chr3R 11102283 11102299 chr3R 11102414 11102430 5 131 26.0 8.0 17.0 0.3 147 chr3R 11102283 intergenic not near genes chr3R 11102356 intergenic not near genes chr3R 11102430 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-301_125b 3325 chr3R 11102301 11102340 chr3R 11102411 11102415 13 120 15.0 7.5 11.2 1.1 114 chr3R 11102301 intergenic not near genes chr3R 11102358 intergenic not near genes chr3R 11102415 intergenic not near genes chr3R_13_11100001 chr3R_11100001 RAL-301_125b 3326 chr3R 11144898 11144970 chr3R 11145067 11145139 6 168 36.0 39.0 37.5 0.2 241 chr3R 11144898 exon CheA86a - chr3R 11145018 exon CheA86a - chr3R 11145139 exon CheA86a - chr3R_6_11145001 chr3R_11145001 RAL-301_125b 3327 chr3R 11154998 11155068 chr3R 11155121 11155196 30 128 8.0 7.0 7.5 3.5 198 chr3R 11154998 intron Ugt86Dc + chr3R 11155097 intron Ugt86Dc + chr3R 11155196 exon Ugt86Dc + chr3R_30_11155001 chr3R_11155001 RAL-301_125b 3328 chr3R 11174542 11174614 chr3R 11175306 11175378 18 764 50.5 50.0 50.2 0.4 836 chr3R 11174542 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175378 exon Ugt86Dj - chr3R_18_11170001 chr3R_11170001 RAL-301_125b 3329 chr3R 11192242 11192314 chr3R 11192939 11192980 26 693 7.0 12.0 9.5 2.5 738 chr3R 11192242 intergenic not near genes chr3R 11192611 intergenic not near genes chr3R 11192980 intergenic not near genes chr3R_26_11190001 chr3R_11190001 RAL-301_125b 3330 chr3R 11247195 11247227 chr3R 11247325 11247356 INE-1 17 131 11.0 9.5 10.2 1.5 161 chr3R 11247195 intergenic CG5214 +,CR43283 - chr3R 11247276 intergenic CR43283 -,CG5214 + chr3R 11247356 intergenic CR43283 -,CG5214 + chr3R_17_11245001 chr3R_11245001 RAL-301_125b 3331 chr3R 11265881 11265923 chr3R 11266015 11266040 18 132 14.5 12.5 13.5 1.2 159 chr3R 11265881 intergenic not near genes chr3R 11265960 intergenic not near genes chr3R 11266040 intergenic not near genes chr3R_18_11265001 chr3R_11265001 RAL-301_125b 3332 chr3R 11269402 11269471 chr3R 11269577 11269646 32 174 5.5 10.5 8.0 3.6 244 chr3R 11269402 intergenic CR31386 - chr3R 11269524 3` UTR CR31386 - chr3R 11269646 3` UTR CR31386 - chr3R_32_11265001 chr3R_11265001 RAL-301_125b 3333 chr3R 11313185 11313214 chr3R 11313324 11313353 14 138 27.5 6.5 17.0 0.8 168 chr3R 11313185 intergenic not near genes chr3R 11313269 intergenic not near genes chr3R 11313353 intergenic not near genes chr3R_14_11310001 chr3R_11310001 RAL-301_125b 3334 chr3R 11313225 11313255 chr3R 11313324 11313394 15 133 11.0 6.5 8.8 1.5 169 chr3R 11313225 intergenic not near genes chr3R 11313310 intergenic not near genes chr3R 11313394 intergenic not near genes chr3R_15_11310001 chr3R_11310001 RAL-301_125b 3335 chr3R 11342501 11342568 chr3R 11342627 11342694 36 126 8.0 9.5 8.8 3.7 193 chr3R 11342501 intron pros + chr3R 11342598 intron pros + chr3R 11342694 intron pros + chr3R_36_11340001 chr3R_11340001 RAL-301_125b 3336 chr3R 11342887 11342898 chr3R 11343002 11343045 6 130 9.0 12.0 10.5 0.5 158 chr3R 11342887 intron pros + chr3R 11342966 intron pros + chr3R 11343045 intron pros + chr3R_6_11340001 chr3R_11340001 RAL-301_125b 3337 chr3R 11379194 11379228 chr3R 11388399 11388433 roo 14 9204 12.0 10.0 11.0 1.2 9239 chr3R 11379194 intron pros + chr3R 11383814 intron pros + chr3R 11388433 intron pros + chr3R_14_11380001 chr3R_11380001 RAL-301_125b 3338 chr3R 11452027 11452105 chr3R 11452164 11452242 42 136 8.0 7.0 7.5 4.9 215 chr3R 11452027 intron CG17230 + chr3R 11452134 intron CG17230 + chr3R 11452242 intron CG17230 + chr3R_42_11450001 chr3R_11450001 RAL-301_125b 3339 chr3R 11455538 11455603 chr3R 11455714 11455779 32 174 11.0 10.0 10.5 2.8 241 chr3R 11455538 intron,intron CG17230 +,PGRP-LB - chr3R 11455658 intron,intron CG17230 +,PGRP-LB - chr3R 11455779 intron,intron CG17230 +,PGRP-LB - chr3R_32_11455001 chr3R_11455001 RAL-301_125b 3340 chr3R 11483395 11483480 chr3R 11483530 11483571 27 127 4.0 6.0 5.0 4.5 176 chr3R 11483395 intergenic not near genes chr3R 11483483 intergenic not near genes chr3R 11483571 intergenic not near genes chr3R_27_11480001 chr3R_11480001 RAL-301_125b 3341 chr3R 11664743 11664820 chr3R 11664885 11664962 38 141 0.0 7.5 3.8 7.9 219 chr3R 11664743 intron CG42327 + chr3R 11664852 intron CG42327 + chr3R 11664962 intron CG42327 + chr3R_38_11660001 chr3R_11660001 RAL-301_125b 3342 chr3R 11694680 11694738 chr3R 11694823 11694881 27 143 10.0 12.5 11.2 2.2 201 chr3R 11694680 intergenic Fer3 - chr3R 11694780 intergenic Fer3 - chr3R 11694881 intergenic not near genes chr3R_27_11690001 chr3R_11690001 RAL-301_125b 3343 chr3R 11708588 11708662 chr3R 11708846 11708920 31 255 7.0 0.0 3.5 6.9 332 chr3R 11708588 intergenic not near genes chr3R 11708754 intergenic not near genes chr3R 11708920 intergenic not near genes chr3R_31_11705001 chr3R_11705001 RAL-301_125b 3344 chr3R 11713449 11713521 chr3R 11713579 11713651 34 129 11.0 8.0 9.5 3.2 202 chr3R 11713449 intergenic not near genes chr3R 11713550 intergenic not near genes chr3R 11713651 intergenic not near genes chr3R_34_11710001 chr3R_11710001 RAL-301_125b 3345 chr3R 11728124 11728203 chr3R 11728259 11728334 24 128 4.0 10.5 7.2 2.9 210 chr3R 11728124 intron CG12594 + chr3R 11728229 intron CG12594 + chr3R 11728334 intron CG12594 + chr3R_24_11725001 chr3R_11725001 RAL-301_125b 3346 chr3R 11811052 11811119 chr3R 11811198 11811209 29 142 8.5 9.5 9.0 2.9 157 chr3R 11811052 5` UTR ClC-a - chr3R 11811130 5` UTR ClC-a - chr3R 11811209 intron ClC-a - chr3R_29_11810001 chr3R_11810001 RAL-301_125b 3347 chr3R 11830300 11830359 chr3R 11830434 11830493 28 133 8.5 8.5 8.5 2.9 193 chr3R 11830300 intron CG6959 - chr3R 11830396 intron CG6959 - chr3R 11830493 intron CG6959 - chr3R_28_11830001 chr3R_11830001 RAL-301_125b 3348 chr3R 11830930 11831001 chr3R 11831124 11831183 11 190 0.0 6.0 3.0 2.8 253 chr3R 11830930 intron CG6959 - chr3R 11831056 intron CG6959 - chr3R 11831183 intron CG6959 - chr3R_11_11830001 chr3R_11830001 RAL-301_125b 3349 chr3R 11841020 11841068 chr3R 11846261 11846309 BS 27 5236 17.0 14.5 15.8 1.6 5289 chr3R 11841020 intron CG6959 - chr3R 11843664 intron CG6959 - chr3R 11846309 intron CG6959 - chr3R_27_11840001 chr3R_11840001 RAL-301_125b 3350 chr3R 11841069 11841086 chr3R 11846254 11846327 BS 10 5228 12.5 12.0 12.2 0.8 5258 chr3R 11841069 intron CG6959 - chr3R 11843698 intron CG6959 - chr3R 11846327 intron CG6959 - chr3R_10_11840001 chr3R_11840001 RAL-301_125b 3351 chr3R 11919264 11919337 chr3R 11919402 11919439 27 127 4.5 10.5 7.5 3.2 175 chr3R 11919264 intron Cad87A - chr3R 11919352 intron Cad87A - chr3R 11919439 intron Cad87A - chr3R_27_11915001 chr3R_11915001 RAL-301_125b 3352 chr3R 11945334 11945406 chr3R 11945482 11945554 35 147 10.0 5.0 7.5 4.1 220 chr3R 11945334 intron Cad87A - chr3R 11945444 intron Cad87A - chr3R 11945554 intron Cad87A - chr3R_35_11945001 chr3R_11945001 RAL-301_125b 3353 chr3R 11957807 11957877 chr3R 11958140 11958210 S-element 20 333 7.0 3.0 5.0 3.3 403 chr3R 11957807 intergenic not near genes chr3R 11958008 intergenic not near genes chr3R 11958210 intergenic not near genes chr3R_20_11955001 chr3R_11955001 RAL-301_125b 3354 chr3R 11994966 11995025 chr3R 11995075 11995133 24 117 7.5 11.0 9.2 2.4 167 chr3R 11994966 exon Tk - chr3R 11995050 exon Tk - chr3R 11995133 exon Tk - chr3R_24_11995001 chr3R_11995001 RAL-301_125b 3355 chr3R 12016995 12017022 chr3R 12017122 12017149 11 127 4.5 16.5 10.5 1.0 154 chr3R 12016995 5` UTR CG3313 - chr3R 12017072 intergenic CG3313 -,Spt3 + chr3R 12017149 intergenic Spt3 +,CG3313 - chr3R_11_12015001 chr3R_12015001 RAL-301_125b 3356 chr3R 12022835 12022914 chr3R 12025062 12025105 pogo 27 2224 4.0 8.0 6.0 3.9 2270 chr3R 12022835 intergenic not near genes chr3R 12023970 intergenic not near genes chr3R 12025105 intergenic not near genes chr3R_27_12020001 chr3R_12020001 RAL-301_125b 3357 chr3R 12037273 12037345 chr3R 12037580 12037654 18 304 0.0 11.5 5.8 2.6 381 chr3R 12037273 intergenic not near genes chr3R 12037464 intergenic not near genes chr3R 12037654 intergenic not near genes chr3R_18_12035001 chr3R_12035001 RAL-301_125b 3358 chr3R 12081953 12082010 chr3R 12082074 12082086 11 106 7.0 4.0 5.5 1.7 133 chr3R 12081953 intron CG14741 - chr3R 12082020 intron CG14741 - chr3R 12082086 intron CG14741 - chr3R_11_12080001 chr3R_12080001 RAL-301_125b 3359 chr3R 12085341 12085418 chr3R 12085507 12085562 16 145 6.5 2.5 4.5 2.9 221 chr3R 12085341 intron CG14741 - chr3R 12085452 intron CG14741 - chr3R 12085562 intron CG14741 - chr3R_16_12085001 chr3R_12085001 RAL-301_125b 3360 chr3R 12111832 12111899 chr3R 12111967 12111974 14 130 0.0 8.0 4.0 2.8 142 chr3R 12111832 intergenic dpr17 + chr3R 12111903 intergenic dpr17 + chr3R 12111974 intergenic not near genes chr3R_14_12110001 chr3R_12110001 RAL-301_125b 3361 chr3R 12154060 12154081 chr3R 12154439 12154484 14 383 69.0 41.0 55.0 0.2 424 chr3R 12154060 intron dpr15 - chr3R 12154272 intron dpr15 - chr3R 12154484 intron dpr15 - chr3R_14_12150001 chr3R_12150001 RAL-301_125b 3362 chr3R 12169187 12169222 chr3R 12169315 12169350 9 128 14.5 12.0 13.2 0.6 163 chr3R 12169187 intergenic not near genes chr3R 12169268 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_9_12165001 chr3R_12165001 RAL-301_125b 3363 chr3R 12175184 12175255 chr3R 12175314 12175386 16 131 6.0 6.5 6.2 2.2 202 chr3R 12175184 intergenic not near genes chr3R 12175285 intergenic not near genes chr3R 12175386 intergenic not near genes chr3R_16_12175001 chr3R_12175001 RAL-301_125b 3364 chr3R 12183134 12183207 chr3R 12183270 12183328 25 134 7.0 6.5 6.8 3.2 194 chr3R 12183134 intergenic not near genes chr3R 12183231 intergenic not near genes chr3R 12183328 intergenic not near genes chr3R_25_12180001 chr3R_12180001 RAL-301_125b 3365 chr3R 12267812 12267884 chr3R 12267942 12268014 29 130 12.0 9.5 10.8 2.5 202 chr3R 12267812 intron svp + chr3R 12267913 intron svp + chr3R 12268014 intron svp + chr3R_29_12265001 chr3R_12265001 RAL-301_125b 3366 chr3R 12297606 12297620 chr3R 12297733 12297747 5 127 22.0 17.5 19.8 0.2 141 chr3R 12297606 intron svp + chr3R 12297676 intron svp + chr3R 12297747 intron svp + chr3R_5_12295001 chr3R_12295001 RAL-301_125b 3367 chr3R 12297621 12297643 chr3R 12297731 12297769 6 112 17.0 18.0 17.5 0.3 148 chr3R 12297621 intron svp + chr3R 12297695 intron svp + chr3R 12297769 intron svp + chr3R_6_12295001 chr3R_12295001 RAL-301_125b 3368 chr3R 12344082 12344156 chr3R 12344209 12344283 34 124 6.0 6.0 6.0 4.9 201 chr3R 12344082 intergenic not near genes chr3R 12344182 intergenic not near genes chr3R 12344283 intergenic not near genes chr3R_34_12340001 chr3R_12340001 RAL-301_125b 3369 chr3R 12392842 12392854 chr3R 12392992 12393004 7 150 20.0 11.5 15.8 0.4 162 chr3R 12392842 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392923 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393004 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_7_12390001 chr3R_12390001 RAL-301_125b 3370 chr3R 12392856 12392897 chr3R 12392991 12393047 20 149 10.0 11.0 10.5 1.7 191 chr3R 12392856 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392952 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393047 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_20_12390001 chr3R_12390001 RAL-301_125b 3371 chr3R 12598978 12599031 chr3R 12599148 12599221 27 183 7.5 11.5 9.5 2.6 243 chr3R 12598978 intergenic not near genes chr3R 12599100 intergenic not near genes chr3R 12599221 intergenic not near genes chr3R_27_12595001 chr3R_12595001 RAL-301_125b 3372 chr3R 12725895 12725970 chr3R 12726049 12726125 24 144 8.0 8.5 8.2 2.6 230 chr3R 12725895 intergenic not near genes chr3R 12726010 intergenic not near genes chr3R 12726125 intergenic not near genes chr3R_24_12725001 chr3R_12725001 RAL-301_125b 3373 chr3R 12733431 12733498 chr3R 12733557 12733625 22 123 11.5 7.5 9.5 2.1 194 chr3R 12733431 intergenic not near genes chr3R 12733528 intergenic not near genes chr3R 12733625 intergenic not near genes chr3R_22_12730001 chr3R_12730001 RAL-301_125b 3374 chr3R 12739007 12739052 chr3R 12739133 12739155 4 118 8.0 12.5 10.2 0.4 148 chr3R 12739007 intergenic not near genes chr3R 12739081 intergenic not near genes chr3R 12739155 intergenic CG5724 + chr3R_4_12735001 chr3R_12735001 RAL-301_125b 3375 chr3R 12763062 12763151 chr3R 12763200 12763278 30 131 2.5 4.5 3.5 6.7 216 chr3R 12763062 intron beat-Vc - chr3R 12763170 intron beat-Vc - chr3R 12763278 intron beat-Vc - chr3R_30_12760001 chr3R_12760001 RAL-301_125b 3376 chr3R 12787939 12787955 chr3R 12788072 12788088 5 132 0.0 21.5 10.8 0.4 149 chr3R 12787939 intergenic not near genes chr3R 12788014 intergenic not near genes chr3R 12788088 intergenic not near genes chr3R_5_12785001 chr3R_12785001 RAL-301_125b 3377 chr3R 12818976 12819049 chr3R 12819109 12819183 24 131 7.0 6.0 6.5 3.2 207 chr3R 12818976 intergenic not near genes chr3R 12819080 intergenic not near genes chr3R 12819183 intergenic not near genes chr3R_24_12815001 chr3R_12815001 RAL-301_125b 3378 chr3R 12864521 12864578 chr3R 12865056 12865113 roo 17 535 5.5 6.5 6.0 2.4 592 chr3R 12864521 intergenic not near genes chr3R 12864817 intergenic not near genes chr3R 12865113 intergenic not near genes chr3R_17_12860001 chr3R_12860001 RAL-301_125b 3379 chr3R 12866439 12866509 chr3R 12866640 12866710 31 200 4.5 8.0 6.2 4.3 271 chr3R 12866439 intergenic not near genes chr3R 12866574 intergenic not near genes chr3R 12866710 intergenic not near genes chr3R_31_12865001 chr3R_12865001 RAL-301_125b 3380 chr3R 12881790 12881805 chr3R 12881923 12881938 11 133 5.0 20.5 12.8 0.8 148 chr3R 12881790 intergenic not near genes chr3R 12881864 intergenic not near genes chr3R 12881938 intergenic not near genes chr3R_11_12880001 chr3R_12880001 RAL-301_125b 3381 chr3R 12883746 12883822 chr3R 12883915 12883976 19 167 6.5 6.0 6.2 2.6 230 chr3R 12883746 intergenic not near genes chr3R 12883861 intergenic not near genes chr3R 12883976 intergenic not near genes chr3R_19_12880001 chr3R_12880001 RAL-301_125b 3382 chr3R 12920112 12920176 chr3R 12925365 12925429 copia 16 5252 9.5 10.0 9.8 1.5 5317 chr3R 12920112 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925429 intron beat-Vb + chr3R_16_12920001 chr3R_12920001 RAL-301_125b 3383 chr3R 12935306 12935321 chr3R 12935460 12935475 9 154 12.5 0.0 6.2 1.2 169 chr3R 12935306 intergenic beat-Vb + chr3R 12935390 intergenic not near genes chr3R 12935475 intergenic not near genes chr3R_9_12935001 chr3R_12935001 RAL-301_125b 3384 chr3R 13045789 13045851 chr3R 13052975 13053037 50 7189 73.0 98.5 85.8 0.6 7248 chr3R 13045789 exon Hsc70-2 + chr3R 13049413 3` UTR CG7966 - chr3R 13053037 intron pic + chr3R_50_13045001 chr3R_13045001 RAL-301_125b 3385 chr3R 13059913 13059977 chr3R 13060158 13060222 32 245 7.0 7.5 7.2 3.9 309 chr3R 13059913 intron sim + chr3R 13060068 intron sim + chr3R 13060222 intron sim + chr3R_32_13060001 chr3R_13060001 RAL-301_125b 3386 chr3R 13066965 13067126 chr3R 13067092 13067252 33 130 1.5 0.0 0.8 18.3 287 chr3R 13066965 intron sim + chr3R 13067108 intron sim + chr3R 13067252 intron sim + chr3R_33_13065001 chr3R_13065001 RAL-301_125b 3387 chr3R 13103969 13103996 chr3R 13104096 13104123 13 127 5.0 0.5 2.8 3.4 154 chr3R 13103969 intron timeout + chr3R 13104046 intron timeout + chr3R 13104123 intron timeout + chr3R_13_13100001 chr3R_13100001 RAL-301_125b 3388 chr3R 13104419 13104419 chr3R 21907534 21907535 4 8803116 40.5 35.0 37.8 0.1 8803116 chr3R 13104419 intron timeout + chr3R 17505977 intergenic Dscam3 - chr3R 21907535 intergenic CG6678 + chr3R_4_17505001 chr3R_17505001 RAL-301_125b 3389 chr3R 13120722 13120800 chr3R 13120848 13120911 30 123 12.5 13.5 13.0 2.1 189 chr3R 13120722 intron timeout + chr3R 13120816 intron timeout + chr3R 13120911 intron timeout + chr3R_30_13120001 chr3R_13120001 RAL-301_125b 3390 chr3R 13135796 13135849 chr3R 13138001 13138074 pogo 20 2224 9.0 7.5 8.2 2.2 2278 chr3R 13135796 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136935 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138074 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_20_13135001 chr3R_13135001 RAL-301_125b 3391 chr3R 13142992 13143055 chr3R 13148618 13148671 mdg3 16 5624 12.0 7.0 9.5 1.5 5679 chr3R 13142992 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145832 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148671 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_16_13145001 chr3R_13145001 RAL-301_125b 3392 chr3R 13194055 13194110 chr3R 13194694 13194749 23 639 12.0 9.0 10.5 2.0 694 chr3R 13194055 intergenic not near genes chr3R 13194402 intergenic not near genes chr3R 13194749 intergenic not near genes chr3R_23_13190001 chr3R_13190001 RAL-301_125b 3393 chr3R 13195909 13195982 chr3R 13196054 13196104 23 143 7.5 5.5 6.5 3.1 195 chr3R 13195909 intergenic not near genes chr3R 13196006 intergenic not near genes chr3R 13196104 intergenic not near genes chr3R_23_13195001 chr3R_13195001 RAL-301_125b 3394 chr3R 13311597 13311610 chr3R 13318887 13318908 Doc 4 7298 30.0 2.5 16.2 0.2 7311 chr3R 13311597 exon CG32473 + chr3R 13315252 intergenic not near genes chr3R 13318908 intergenic CG45080 - chr3R_4_13315001 chr3R_13315001 RAL-301_125b 3395 chr3R 13391591 13391656 chr3R 13391719 13391784 35 127 12.0 13.0 12.5 2.6 193 chr3R 13391591 intron CCHa2 - chr3R 13391688 intron CCHa2 - chr3R 13391784 intron CCHa2 - chr3R_35_13390001 chr3R_13390001 RAL-301_125b 3396 chr3R 13394632 13394641 chr3R 13395031 13395040 4 399 24.5 9.0 16.8 0.2 408 chr3R 13394632 intron CCHa2 - chr3R 13394836 intron CCHa2 - chr3R 13395040 intron CCHa2 - chr3R_4_13390001 chr3R_13390001 RAL-301_125b 3397 chr3R 13394644 13394685 chr3R 13395025 13395068 14 394 15.0 7.5 11.2 1.1 424 chr3R 13394644 intron CCHa2 - chr3R 13394856 intron CCHa2 - chr3R 13395068 5` UTR CCHa2 - chr3R_14_13390001 chr3R_13390001 RAL-301_125b 3398 chr3R 13400977 13401028 chr3R 13401118 13401169 20 141 9.0 0.0 4.5 3.6 192 chr3R 13400977 intron CG9796 - chr3R 13401073 intron CG9796 - chr3R 13401169 intron CG9796 - chr3R_20_13400001 chr3R_13400001 RAL-301_125b 3399 chr3R 13418615 13418684 chr3R 13418741 13418810 31 126 4.0 6.0 5.0 5.2 195 chr3R 13418615 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418810 intergenic not near genes chr3R_31_13415001 chr3R_13415001 RAL-301_125b 3400 chr3R 13505817 13505865 chr3R 13505943 13505991 14 126 10.0 7.5 8.8 1.4 174 chr3R 13505817 intergenic not near genes chr3R 13505904 intergenic not near genes chr3R 13505991 intergenic not near genes chr3R_14_13505001 chr3R_13505001 RAL-301_125b 3401 chr3R 13517180 13517258 chr3R 13520047 13520124 jockey 18 2864 7.5 0.0 3.8 3.8 2944 chr3R 13517180 intergenic not near genes chr3R 13518652 intergenic not near genes chr3R 13520124 intergenic not near genes chr3R_18_13515001 chr3R_13515001 RAL-301_125b 3402 chr3R 13525149 13525157 chr3R 13525301 13525309 5 152 14.5 13.5 14.0 0.3 160 chr3R 13525149 intergenic not near genes chr3R 13525229 intergenic not near genes chr3R 13525309 intergenic not near genes chr3R_5_13525001 chr3R_13525001 RAL-301_125b 3403 chr3R 13525159 13525188 chr3R 13525295 13525340 15 150 11.0 12.0 11.5 1.2 181 chr3R 13525159 intergenic not near genes chr3R 13525250 intergenic not near genes chr3R 13525340 intergenic not near genes chr3R_15_13525001 chr3R_13525001 RAL-301_125b 3404 chr3R 13580799 13580829 chr3R 13580926 13580956 13 126 11.5 14.0 12.8 0.9 157 chr3R 13580799 intergenic not near genes chr3R 13580878 intergenic not near genes chr3R 13580956 intergenic not near genes chr3R_13_13580001 chr3R_13580001 RAL-301_125b 3405 chr3R 13594778 13594800 chr3R 13594907 13594929 11 127 6.0 17.0 11.5 0.9 151 chr3R 13594778 intergenic not near genes chr3R 13594854 intergenic not near genes chr3R 13594929 intergenic not near genes chr3R_11_13590001 chr3R_13590001 RAL-301_125b 3406 chr3R 13595994 13596063 chr3R 13596126 13596195 26 130 7.0 6.5 6.8 3.3 201 chr3R 13595994 intergenic not near genes chr3R 13596094 intergenic not near genes chr3R 13596195 intergenic not near genes chr3R_26_13595001 chr3R_13595001 RAL-301_125b 3407 chr3R 13598036 13598111 chr3R 13598164 13598239 25 128 8.5 8.5 8.5 2.6 203 chr3R 13598036 intergenic not near genes chr3R 13598138 intergenic not near genes chr3R 13598239 intergenic not near genes chr3R_25_13595001 chr3R_13595001 RAL-301_125b 3408 chr3R 13609497 13609581 chr3R 13609648 13609725 21 149 0.0 0.0 0.0 21.0 228 chr3R 13609497 intergenic CG9759 - chr3R 13609611 intergenic CG9759 - chr3R 13609725 intergenic CG9759 - chr3R_21_13605001 chr3R_13605001 RAL-301_125b 3409 chr3R 13659734 13659846 chr3R 13659926 13659984 24 165 0.0 0.0 0.0 24.0 250 chr3R 13659734 intron Hrb87F - chr3R 13659859 intron Hrb87F - chr3R 13659984 intron Hrb87F - chr3R_24_13655001 chr3R_13655001 RAL-301_125b 3410 chr3R 13672897 13672918 chr3R 13673025 13673046 15 128 17.5 11.5 14.5 1.0 149 chr3R 13672897 intron Task6 - chr3R 13672972 intron Task6 - chr3R 13673046 intron Task6 - chr3R_15_13670001 chr3R_13670001 RAL-301_125b 3411 chr3R 13672919 13672967 chr3R 13673021 13673095 20 126 8.0 12.0 10.0 1.8 176 chr3R 13672919 intron Task6 - chr3R 13673007 intron Task6 - chr3R 13673095 intron Task6 - chr3R_20_13670001 chr3R_13670001 RAL-301_125b 3412 chr3R 13693028 13693028 chr3R 21907534 21907536 10 8214507 38.0 35.0 36.5 0.3 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_10_17800001 chr3R_17800001 RAL-301_125b 3413 chr3R 13745380 13745443 chr3R 13745548 13745611 16 168 7.5 2.5 5.0 2.7 231 chr3R 13745380 intron CG34383 + chr3R 13745496 intron CG34383 + chr3R 13745611 intron CG34383 + chr3R_16_13745001 chr3R_13745001 RAL-301_125b 3414 chr3R 13758134 13758168 chr3R 13758270 13758304 8 136 0.0 12.0 6.0 1.1 170 chr3R 13758134 intron CG34383 + chr3R 13758219 intron CG34383 + chr3R 13758304 intron CG34383 + chr3R_8_13755001 chr3R_13755001 RAL-301_125b 3415 chr3R 13763260 13763336 chr3R 13763390 13763463 18 129 8.0 2.5 5.2 2.9 203 chr3R 13763260 3` UTR CG34383 + chr3R 13763362 3` UTR CG34383 + chr3R 13763463 3` UTR CG34383 + chr3R_18_13760001 chr3R_13760001 RAL-301_125b 3416 chr3R 13789465 13789557 chr3R 13789611 13789685 30 132 0.0 8.0 4.0 6.0 220 chr3R 13789465 intergenic not near genes chr3R 13789575 intergenic not near genes chr3R 13789685 intergenic not near genes chr3R_30_13785001 chr3R_13785001 RAL-301_125b 3417 chr3R 13803851 13803862 chr3R 13804115 13804126 11 264 20.5 0.0 10.2 1.0 275 chr3R 13803851 intergenic not near genes chr3R 13803988 intergenic not near genes chr3R 13804126 intergenic not near genes chr3R_11_13800001 chr3R_13800001 RAL-301_125b 3418 chr3R 13835537 13835619 chr3R 13835679 13835712 30 140 5.0 9.0 7.0 3.8 175 chr3R 13835537 exon Nsf2 - chr3R 13835624 intron Nsf2 - chr3R 13835712 intron Nsf2 - chr3R_30_13835001 chr3R_13835001 RAL-301_125b 3419 chr3R 13846142 13846202 chr3R 13846290 13846349 18 147 13.5 6.0 9.8 1.7 207 chr3R 13846142 intergenic not near genes chr3R 13846246 intergenic not near genes chr3R 13846349 intergenic not near genes chr3R_18_13845001 chr3R_13845001 RAL-301_125b 3420 chr3R 13863638 13863696 chr3R 13863776 13863834 27 136 9.0 12.5 10.8 2.3 196 chr3R 13863638 intergenic not near genes chr3R 13863736 intergenic not near genes chr3R 13863834 intergenic not near genes chr3R_27_13860001 chr3R_13860001 RAL-301_125b 3421 chr3R 13909868 13909909 chr3R 13909997 13910038 25 128 4.5 12.0 8.2 2.7 170 chr3R 13909868 intergenic not near genes chr3R 13909953 intergenic not near genes chr3R 13910038 intergenic not near genes chr3R_25_13905001 chr3R_13905001 RAL-301_125b 3422 chr3R 13927210 13927230 chr3R 13927350 13927370 10 140 4.0 8.0 6.0 1.4 160 chr3R 13927210 intergenic not near genes chr3R 13927290 intergenic not near genes chr3R 13927370 intergenic not near genes chr3R_10_13925001 chr3R_13925001 RAL-301_125b 3423 chr3R 13948178 13948245 chr3R 13948306 13948373 27 128 10.0 7.0 8.5 2.8 195 chr3R 13948178 intergenic CG31517 + chr3R 13948276 intergenic CG31517 + chr3R 13948373 intergenic CG31517 + chr3R_27_13945001 chr3R_13945001 RAL-301_125b 3424 chr3R 13964594 13964673 chr3R 13964725 13964804 5 131 10.5 6.0 8.2 0.5 210 chr3R 13964594 intergenic Orc2 +,CG9925 - chr3R 13964699 intergenic Orc2 + chr3R 13964804 intergenic Orc2 + chr3R_5_13960001 chr3R_13960001 RAL-301_125b 3425 chr3R 14037536 14037575 chr3R 14037667 14037672 15 126 15.0 1.0 8.0 1.7 136 chr3R 14037536 intergenic not near genes chr3R 14037604 intergenic not near genes chr3R 14037672 intergenic not near genes chr3R_15_14035001 chr3R_14035001 RAL-301_125b 3426 chr3R 14067094 14067152 chr3R 14067223 14067281 28 129 9.0 7.5 8.2 3.0 187 chr3R 14067094 exon foxo + chr3R 14067188 intron foxo + chr3R 14067281 intron foxo + chr3R_28_14065001 chr3R_14065001 RAL-301_125b 3427 chr3R 14083359 14083374 chr3R 14083510 14083525 12 151 22.0 0.0 11.0 1.0 166 chr3R 14083359 intron foxo + chr3R 14083442 intron foxo + chr3R 14083525 intron foxo + chr3R_12_14080001 chr3R_14080001 RAL-301_125b 3428 chr3R 14109036 14109080 chr3R 14109165 14109211 22 131 15.0 0.0 7.5 2.6 175 chr3R 14109036 intergenic CR44237 -,Or88a + chr3R 14109124 intergenic CR44237 -,Or88a + chr3R 14109211 intergenic CR44237 -,Or88a + chr3R_22_14105001 chr3R_14105001 RAL-301_125b 3429 chr3R 14180767 14180832 chr3R 14185582 14185647 F-element 19 4815 8.0 6.0 7.0 2.4 4880 chr3R 14180767 intron Dop1R1 - chr3R 14183207 intron Dop1R1 - chr3R 14185647 intron Dop1R1 - chr3R_19_14180001 chr3R_14180001 RAL-301_125b 3430 chr3R 14193567 14193626 chr3R 14193908 14193966 25 340 6.5 8.5 7.5 2.9 399 chr3R 14193567 intron Dop1R1 - chr3R 14193766 intron Dop1R1 - chr3R 14193966 intron Dop1R1 - chr3R_25_14190001 chr3R_14190001 RAL-301_125b 3431 chr3R 14194435 14194461 chr3R 14203614 14203640 roo 12 9179 5.5 8.0 6.8 1.5 9205 chr3R 14194435 intron Dop1R1 - chr3R 14199038 intron Dop1R1 - chr3R 14203640 intron Dop1R1 - chr3R_12_14195001 chr3R_14195001 RAL-301_125b 3432 chr3R 14217377 14217454 chr3R 14217503 14217580 26 122 10.0 9.0 9.5 2.5 203 chr3R 14217377 intron CG9649 - chr3R 14217478 intron CG9649 - chr3R 14217580 exon CG9649 - chr3R_26_14215001 chr3R_14215001 RAL-301_125b 3433 chr3R 14246368 14246418 chr3R 14247894 14247964 jockey 20 1537 12.5 6.0 9.2 2.0 1596 chr3R 14246368 intergenic not near genes chr3R 14247166 intergenic not near genes chr3R 14247964 intergenic not near genes chr3R_20_14245001 chr3R_14245001 RAL-301_125b 3434 chr3R 14295487 14295554 chr3R 14295624 14295687 22 134 0.0 6.5 3.2 5.2 200 chr3R 14295487 intron CG12207 + chr3R 14295587 intron CG12207 + chr3R 14295687 intron CG12207 + chr3R_22_14295001 chr3R_14295001 RAL-301_125b 3435 chr3R 14343261 14343327 chr3R 14343471 14343537 20 210 6.5 8.0 7.2 2.4 276 chr3R 14343261 intron NK7.1 - chr3R 14343399 intron NK7.1 - chr3R 14343537 intron NK7.1 - chr3R_20_14340001 chr3R_14340001 RAL-301_125b 3436 chr3R 14374537 14374544 chr3R 14374698 14374705 4 161 18.0 9.5 13.8 0.3 168 chr3R 14374537 intergenic not near genes chr3R 14374621 intergenic not near genes chr3R 14374705 intergenic not near genes chr3R_4_14370001 chr3R_14370001 RAL-301_125b 3437 chr3R 14374547 14374568 chr3R 14374697 14374729 10 159 15.0 9.0 12.0 0.8 182 chr3R 14374547 intergenic not near genes chr3R 14374638 intergenic not near genes chr3R 14374729 intergenic not near genes chr3R_10_14370001 chr3R_14370001 RAL-301_125b 3438 chr3R 14384509 14384583 chr3R 14384665 14384756 6 170 9.0 0.0 4.5 1.1 247 chr3R 14384509 intergenic not near genes chr3R 14384632 intergenic not near genes chr3R 14384756 intergenic not near genes chr3R_6_14380001 chr3R_14380001 RAL-301_125b 3439 chr3R 14408491 14408527 chr3R 14408625 14408666 6 138 4.5 10.0 7.2 0.7 175 chr3R 14408491 intron cv-c - chr3R 14408578 intron cv-c - chr3R 14408666 intron cv-c - chr3R_6_14405001 chr3R_14405001 RAL-301_125b 3440 chr3R 14541358 14541434 chr3R 14541506 14541587 25 150 3.5 7.5 5.5 3.8 229 chr3R 14541358 intron Pde6 - chr3R 14541472 intron Pde6 - chr3R 14541587 intron Pde6 - chr3R_25_14540001 chr3R_14540001 RAL-301_125b 3441 chr3R 14545989 14546057 chr3R 14546116 14546184 23 127 9.0 0.5 4.8 4.0 195 chr3R 14545989 intron Pde6 - chr3R 14546086 intron Pde6 - chr3R 14546184 intron Pde6 - chr3R_23_14545001 chr3R_14545001 RAL-301_125b 3442 chr3R 14563977 14563990 chr3R 14564127 14564140 5 150 0.0 4.5 2.2 1.6 163 chr3R 14563977 intergenic CG8087 - chr3R 14564058 intergenic CG8087 - chr3R 14564140 intergenic CG8087 - chr3R_5_14560001 chr3R_14560001 RAL-301_125b 3443 chr3R 14624669 14624676 chr3R 14624882 14624883 5 212 26.5 11.0 18.8 0.3 214 chr3R 14624669 intron put - chr3R 14624776 intron put - chr3R 14624883 intron put - chr3R_5_14620001 chr3R_14620001 RAL-301_125b 3444 chr3R 14624678 14624737 chr3R 14624876 14624950 30 212 7.5 10.0 8.8 3.1 272 chr3R 14624678 intron put - chr3R 14624814 intron put - chr3R 14624950 intron put - chr3R_30_14620001 chr3R_14620001 RAL-301_125b 3445 chr3R 14682876 14682892 chr3R 14683007 14683032 7 139 3.5 14.0 8.8 0.7 156 chr3R 14682876 intron Meltrin - chr3R 14682954 intron Meltrin - chr3R 14683032 intron Meltrin - chr3R_7_14680001 chr3R_14680001 RAL-301_125b 3446 chr3R 14688105 14688119 chr3R 14688236 14688250 9 131 21.0 0.0 10.5 0.8 145 chr3R 14688105 intron Meltrin - chr3R 14688178 intron Meltrin - chr3R 14688250 intron Meltrin - chr3R_9_14685001 chr3R_14685001 RAL-301_125b 3447 chr3R 14704350 14704408 chr3R 14704477 14704535 17 126 8.5 12.0 10.2 1.5 185 chr3R 14704350 intron kibra - chr3R 14704442 intron kibra - chr3R 14704535 intron kibra - chr3R_17_14700001 chr3R_14700001 RAL-301_125b 3448 chr3R 14738134 14738212 chr3R 14738404 14738486 19 269 6.0 8.5 7.2 2.3 352 chr3R 14738134 intron eff - chr3R 14738310 intron eff - chr3R 14738486 intron eff - chr3R_19_14735001 chr3R_14735001 RAL-301_125b 3449 chr3R 14760491 14760533 chr3R 14760632 14760657 16 140 10.5 0.0 5.2 2.6 166 chr3R 14760491 intron jvl + chr3R 14760574 intron jvl + chr3R 14760657 intron jvl + chr3R_16_14760001 chr3R_14760001 RAL-301_125b 3450 chr3R 14770325 14770397 chr3R 14770940 14771012 27 615 6.0 10.0 8.0 3.0 687 chr3R 14770325 intron jvl + chr3R 14770668 intron jvl + chr3R 14771012 intron jvl + chr3R_27_14770001 chr3R_14770001 RAL-301_125b 3451 chr3R 14773462 14773496 chr3R 14773593 14773628 13 131 9.5 6.0 7.8 1.5 166 chr3R 14773462 intron jvl + chr3R 14773545 intron jvl + chr3R 14773628 intron jvl + chr3R_13_14770001 chr3R_14770001 RAL-301_125b 3452 chr3R 14824492 14824566 chr3R 14824636 14824702 24 138 7.5 0.0 3.8 5.0 210 chr3R 14824492 intron btsz - chr3R 14824597 intron btsz - chr3R 14824702 intron btsz - chr3R_24_14820001 chr3R_14820001 RAL-301_125b 3453 chr3R 14944849 14944896 chr3R 14944980 14945027 20 130 14.5 14.5 14.5 1.3 178 chr3R 14944849 intergenic not near genes chr3R 14944938 intergenic not near genes chr3R 14945027 intergenic not near genes chr3R_20_14940001 chr3R_14940001 RAL-301_125b 3454 chr3R 14995649 14995724 chr3R 14995784 14995859 26 134 8.5 6.5 7.5 3.1 210 chr3R 14995649 intergenic not near genes chr3R 14995754 intergenic not near genes chr3R 14995859 intergenic not near genes chr3R_26_14995001 chr3R_14995001 RAL-301_125b 3455 chr3R 15040819 15040884 chr3R 15040988 15041059 21 173 4.5 9.0 6.8 2.7 240 chr3R 15040819 intergenic not near genes chr3R 15040939 intergenic not near genes chr3R 15041059 intergenic not near genes chr3R_21_15040001 chr3R_15040001 RAL-301_125b 3456 chr3R 15041162 15041229 chr3R 15041290 15041357 31 128 12.0 0.0 6.0 4.4 195 chr3R 15041162 intergenic not near genes chr3R 15041260 intergenic not near genes chr3R 15041357 intergenic not near genes chr3R_31_15040001 chr3R_15040001 RAL-301_125b 3457 chr3R 15041352 15041419 chr3R 15045186 15045253 Doc 20 3834 0.0 5.0 2.5 5.7 3901 chr3R 15041352 intergenic not near genes chr3R 15043302 intergenic not near genes chr3R 15045253 intergenic not near genes chr3R_20_15040001 chr3R_15040001 RAL-301_125b 3458 chr3R 15059231 15059479 chr3R 15059475 15059616 BS 19 232 0.0 0.0 0.0 19.0 385 chr3R 15059231 intron dpr9 - chr3R 15059424 intron dpr9 - chr3R 15059616 intron dpr9 - chr3R_19_15055001 chr3R_15055001 RAL-301_125b 3459 chr3R 15060998 15061031 chr3R 15061129 15061162 15 131 11.5 9.5 10.5 1.3 164 chr3R 15060998 intron dpr9 - chr3R 15061080 intron dpr9 - chr3R 15061162 intron dpr9 - chr3R_15_15060001 chr3R_15060001 RAL-301_125b 3460 chr3R 15079764 15079796 chr3R 15080055 15080087 pogo 12 291 14.0 6.0 10.0 1.1 323 chr3R 15079764 3` UTR CG6966 - chr3R 15079926 3` UTR CG6966 - chr3R 15080087 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-301_125b 3461 chr3R 15079823 15079838 chr3R 15080107 15080122 pogo 5 284 7.0 16.0 11.5 0.4 299 chr3R 15079823 3` UTR CG6966 - chr3R 15079972 3` UTR CG6966 - chr3R 15080122 3` UTR CG6966 - chr3R_5_15075001 chr3R_15075001 RAL-301_125b 3462 chr3R 15084096 15084177 chr3R 15084278 15084359 37 181 3.5 3.5 3.5 8.2 263 chr3R 15084096 intron CG6966 - chr3R 15084228 intron CG6966 - chr3R 15084359 intron CG6966 - chr3R_37_15080001 chr3R_15080001 RAL-301_125b 3463 chr3R 15088076 15088102 chr3R 15088224 15088250 9 148 7.5 9.5 8.5 0.9 174 chr3R 15088076 intron CG6966 - chr3R 15088163 intron CG6966 - chr3R 15088250 intron CG6966 - chr3R_9_15085001 chr3R_15085001 RAL-301_125b 3464 chr3R 15102461 15102531 chr3R 15109769 15109835 412 27 7308 6.0 6.5 6.2 3.8 7374 chr3R 15102461 intron CG42788 - chr3R 15106148 intron CG42788 - chr3R 15109835 intron CG42788 - chr3R_27_15105001 chr3R_15105001 RAL-301_125b 3465 chr3R 15114871 15114904 chr3R 15114998 15115031 15 127 17.0 7.0 12.0 1.2 160 chr3R 15114871 intron CG42788 - chr3R 15114951 intron CG42788 - chr3R 15115031 intron CG42788 - chr3R_15_15110001 chr3R_15110001 RAL-301_125b 3466 chr3R 15127739 15127807 chr3R 15127869 15127932 24 130 5.0 8.5 6.8 3.1 193 chr3R 15127739 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127932 intron CG42788 - chr3R_24_15125001 chr3R_15125001 RAL-301_125b 3467 chr3R 15132031 15132067 chr3R 15135141 15135177 Juan 35 3110 18.5 36.0 27.2 1.2 3146 chr3R 15132031 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135177 3` UTR CG6912 - chr3R_35_15130001 chr3R_15130001 RAL-301_125b 3468 chr3R 15130867 15130917 chr3R 15141178 15141228 15 10311 51.5 52.5 52.0 0.3 10361 chr3R 15130867 intron CG42788 - chr3R 15136048 exon CG6912 - chr3R 15141228 exon CG3987 + chr3R_15_15135001 chr3R_15135001 RAL-301_125b 3469 chr3R 15156172 15156214 chr3R 15156369 15156411 18 197 15.0 1.5 8.2 2.0 239 chr3R 15156172 intron Gyc88E + chr3R 15156292 intron Gyc88E + chr3R 15156411 intron Gyc88E + chr3R_18_15155001 chr3R_15155001 RAL-301_125b 3470 chr3R 15162507 15162568 chr3R 15167324 15167385 F-element 30 4817 14.0 10.5 12.2 2.3 4878 chr3R 15162507 intron Gyc88E + chr3R 15164946 intron Gyc88E + chr3R 15167385 intron Gyc88E + chr3R_30_15160001 chr3R_15160001 RAL-301_125b 3471 chr3R 15167773 15167825 chr3R 15167980 15168032 10 207 5.5 9.5 7.5 1.2 259 chr3R 15167773 intron Gyc88E + chr3R 15167902 intron Gyc88E + chr3R 15168032 intron Gyc88E + chr3R_10_15165001 chr3R_15165001 RAL-301_125b 3472 chr3R 15190611 15190645 chr3R 15190786 15190820 13 175 20.5 6.5 13.5 0.9 209 chr3R 15190611 3` UTR Gyc88E + chr3R 15190716 3` UTR Gyc88E + chr3R 15190820 3` UTR Gyc88E + chr3R_13_15190001 chr3R_15190001 RAL-301_125b 3473 chr3R 15190649 15190674 chr3R 15190824 15190849 11 175 12.0 14.0 13.0 0.8 200 chr3R 15190649 3` UTR Gyc88E + chr3R 15190749 3` UTR Gyc88E + chr3R 15190849 3` UTR Gyc88E + chr3R_11_15190001 chr3R_15190001 RAL-301_125b 3474 chr3R 15265372 15265434 chr3R 15265507 15265569 23 134 6.0 8.5 7.2 2.8 197 chr3R 15265372 intergenic Set +,Oscp + chr3R 15265470 intergenic Oscp +,Set + chr3R 15265569 intergenic Oscp +,Set + chr3R_23_15265001 chr3R_15265001 RAL-301_125b 3475 chr3R 15286987 15286989 chr3R 21907534 21907534 4 6620547 44.0 35.0 39.5 0.1 6620547 chr3R 15286987 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907534 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-301_125b 3476 chr3R 15320239 15320289 chr3R 15320586 15320636 21 347 10.5 9.5 10.0 1.9 397 chr3R 15320239 intergenic CG44040 +,CG6276 - chr3R 15320438 exon CG44040 + chr3R 15320636 3` UTR CG44040 + chr3R_21_15320001 chr3R_15320001 RAL-301_125b 3477 chr3R 15406097 15406155 chr3R 15406227 15406286 18 131 11.5 3.0 7.2 2.2 189 chr3R 15406097 intron CG6125 - chr3R 15406192 intron CG6125 - chr3R 15406286 intron CG6125 - chr3R_18_15405001 chr3R_15405001 RAL-301_125b 3478 chr3R 15445860 15445903 chr3R 15445995 15446038 20 134 13.0 0.0 6.5 2.7 178 chr3R 15445860 exon AdamTS-A - chr3R 15445949 intron AdamTS-A - chr3R 15446038 intron AdamTS-A - chr3R_20_15445001 chr3R_15445001 RAL-301_125b 3479 chr3R 15517570 15517603 chr3R 15517690 15517736 15 124 10.5 9.0 9.8 1.4 166 chr3R 15517570 intergenic not near genes chr3R 15517653 intergenic not near genes chr3R 15517736 intergenic not near genes chr3R_15_15515001 chr3R_15515001 RAL-301_125b 3480 chr3R 15517611 15517623 chr3R 15517683 15517756 5 117 7.5 7.0 7.2 0.6 145 chr3R 15517611 intergenic not near genes chr3R 15517684 intergenic not near genes chr3R 15517756 intergenic not near genes chr3R_5_15515001 chr3R_15515001 RAL-301_125b 3481 chr3R 15576390 15576406 chr3R 15576522 15576537 10 132 7.0 3.0 5.0 1.7 147 chr3R 15576390 intergenic not near genes chr3R 15576464 intergenic not near genes chr3R 15576537 intergenic not near genes chr3R_10_15575001 chr3R_15575001 RAL-301_125b 3482 chr3R 15594656 15594676 chr3R 15594789 15594809 10 133 0.0 20.5 10.2 0.9 153 chr3R 15594656 intergenic not near genes chr3R 15594732 intergenic not near genes chr3R 15594809 intergenic not near genes chr3R_10_15590001 chr3R_15590001 RAL-301_125b 3483 chr3R 15601126 15601188 chr3R 15608698 15608760 412 25 7569 10.5 7.0 8.8 2.6 7634 chr3R 15601126 intergenic not near genes chr3R 15604943 intergenic not near genes chr3R 15608760 intergenic not near genes chr3R_25_15600001 chr3R_15600001 RAL-301_125b 3484 chr3R 15618698 15618755 chr3R 15626208 15626279 blood 24 7520 9.5 5.0 7.2 2.9 7581 chr3R 15618698 intergenic not near genes chr3R 15622488 intergenic not near genes chr3R 15626279 intergenic not near genes chr3R_24_15620001 chr3R_15620001 RAL-301_125b 3485 chr3R 15646740 15646799 chr3R 15646872 15646932 28 133 10.0 5.5 7.8 3.2 192 chr3R 15646740 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646932 intergenic not near genes chr3R_28_15645001 chr3R_15645001 RAL-301_125b 3486 chr3R 15691130 15691303 chr3R 15691285 15691440 24 146 0.0 0.0 0.0 24.0 310 chr3R 15691130 intergenic not near genes chr3R 15691285 intergenic not near genes chr3R 15691440 intergenic not near genes chr3R_24_15690001 chr3R_15690001 RAL-301_125b 3487 chr3R 15735193 15735236 chr3R 15739963 15740006 F-element 18 4770 9.0 7.5 8.2 2.0 4813 chr3R 15735193 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15740006 intergenic not near genes chr3R_18_15735001 chr3R_15735001 RAL-301_125b 3488 chr3R 15779605 15779668 chr3R 15779736 15779799 29 130 9.5 11.0 10.2 2.6 194 chr3R 15779605 intergenic CG5614 + chr3R 15779702 intergenic CG5614 + chr3R 15779799 intergenic CG5614 + chr3R_29_15775001 chr3R_15775001 RAL-301_125b 3489 chr3R 15790090 15790240 chr3R 15790248 15790408 30 169 38.5 38.5 38.5 0.8 318 chr3R 15790090 exon c(3)G - chr3R 15790249 exon c(3)G - chr3R 15790408 exon c(3)G - chr3R_30_15790001 chr3R_15790001 RAL-301_125b 3490 chr3R 15790250 15790395 chr3R 15790571 15790651 41 304 37.5 51.0 44.2 0.9 401 chr3R 15790250 exon c(3)G - chr3R 15790450 exon c(3)G - chr3R 15790651 exon c(3)G - chr3R_41_15790001 chr3R_15790001 RAL-301_125b 3491 chr3R 15790794 15790864 chr3R 15790960 15791030 45 166 51.5 45.0 48.2 0.9 236 chr3R 15790794 exon c(3)G - chr3R 15790912 intron c(3)G - chr3R 15791030 exon c(3)G - chr3R_45_15790001 chr3R_15790001 RAL-301_125b 3492 chr3R 15808021 15808034 chr3R 15808166 15808179 7 145 24.5 8.5 16.5 0.4 158 chr3R 15808021 intron alpha-Man-IIb + chr3R 15808100 intron alpha-Man-IIb + chr3R 15808179 intron alpha-Man-IIb + chr3R_7_15805001 chr3R_15805001 RAL-301_125b 3493 chr3R 15808039 15808095 chr3R 15808163 15808224 28 137 11.0 8.5 9.8 2.6 185 chr3R 15808039 intron alpha-Man-IIb + chr3R 15808132 intron alpha-Man-IIb + chr3R 15808224 intron alpha-Man-IIb + chr3R_28_15805001 chr3R_15805001 RAL-301_125b 3494 chr3R 15813287 15813354 chr3R 15813418 15813452 32 132 12.5 7.5 10.0 2.9 165 chr3R 15813287 intron alpha-Man-IIb + chr3R 15813370 intron alpha-Man-IIb + chr3R 15813452 intron alpha-Man-IIb + chr3R_32_15810001 chr3R_15810001 RAL-301_125b 3495 chr3R 15868889 15868911 chr3R 15869019 15869041 9 130 18.5 1.5 10.0 0.8 152 chr3R 15868889 intron CG31183 - chr3R 15868965 intron CG31183 - chr3R 15869041 intron CG31183 - chr3R_9_15865001 chr3R_15865001 RAL-301_125b 3496 chr3R 15878565 15878625 chr3R 15878686 15878755 31 126 8.0 12.0 10.0 2.8 190 chr3R 15878565 intergenic not near genes chr3R 15878660 intergenic not near genes chr3R 15878755 intergenic not near genes chr3R_31_15875001 chr3R_15875001 RAL-301_125b 3497 chr3R 15924875 15924954 chr3R 15925013 15925092 5 135 9.0 5.0 7.0 0.6 217 chr3R 15924875 intron CG4221 + chr3R 15924984 intron CG4221 + chr3R 15925092 intron CG4221 + chr3R_5_15920001 chr3R_15920001 RAL-301_125b 3498 chr3R 15942006 15942074 chr3R 15942807 15942817 31 801 5.5 8.5 7.0 3.9 811 chr3R 15942006 intron Sap47 + chr3R 15942412 intron Sap47 + chr3R 15942817 intron Sap47 + chr3R_31_15940001 chr3R_15940001 RAL-301_125b 3499 chr3R 16033375 16033431 chr3R 16033506 16033562 15 131 9.0 10.0 9.5 1.4 187 chr3R 16033375 intron pnr + chr3R 16033468 intron pnr + chr3R 16033562 intron pnr + chr3R_15_16030001 chr3R_16030001 RAL-301_125b 3500 chr3R 16073389 16073474 chr3R 16073543 16073628 35 154 8.0 6.5 7.2 4.3 239 chr3R 16073389 exon Mhcl - chr3R 16073508 intron Mhcl - chr3R 16073628 intron Mhcl - chr3R_35_16070001 chr3R_16070001 RAL-301_125b 3501 chr3R 16128387 16128462 chr3R 16128522 16128597 27 132 6.0 6.0 6.0 3.9 210 chr3R 16128387 intron Sb + chr3R 16128492 intron Sb + chr3R 16128597 intron Sb + chr3R_27_16125001 chr3R_16125001 RAL-301_125b 3502 chr3R 16133992 16134074 chr3R 16134122 16134205 32 130 8.5 3.5 6.0 4.6 213 chr3R 16133992 intron Sb + chr3R 16134098 intron Sb + chr3R 16134205 intron Sb + chr3R_32_16130001 chr3R_16130001 RAL-301_125b 3503 chr3R 16226760 16226774 chr3R 16226888 16226902 9 128 8.0 13.0 10.5 0.8 142 chr3R 16226760 intron tara + chr3R 16226831 intron tara + chr3R 16226902 intron tara + chr3R_9_16225001 chr3R_16225001 RAL-301_125b 3504 chr3R 16246472 16246553 chr3R 16246598 16246679 18 125 9.0 11.5 10.2 1.6 207 chr3R 16246472 intron tara + chr3R 16246576 intron tara + chr3R 16246679 intron tara + chr3R_18_16245001 chr3R_16245001 RAL-301_125b 3505 chr3R 16308781 16308840 chr3R 16309284 16309343 27 503 11.5 7.5 9.5 2.6 562 chr3R 16308781 intergenic Zip89B + chr3R 16309062 intergenic Zip89B + chr3R 16309343 intergenic not near genes chr3R_27_16305001 chr3R_16305001 RAL-301_125b 3506 chr3R 16391364 16391401 chr3R 16391494 16391531 9 130 13.0 8.0 10.5 0.8 167 chr3R 16391364 intron ss - chr3R 16391448 intron ss - chr3R 16391531 intron ss - chr3R_9_16390001 chr3R_16390001 RAL-301_125b 3507 chr3R 16472540 16472555 chr3R 16472666 16472681 5 124 20.5 16.0 18.2 0.3 141 chr3R 16472540 intergenic Gyc-89Da + chr3R 16472610 5` UTR Gyc-89Da + chr3R 16472681 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 RAL-301_125b 3508 chr3R 16472571 16472590 chr3R 16472683 16472712 7 121 13.0 18.5 15.8 0.4 141 chr3R 16472571 intergenic Gyc-89Da + chr3R 16472642 5` UTR Gyc-89Da + chr3R 16472712 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-301_125b 3509 chr3R 16582860 16582912 chr3R 16582986 16583041 15 126 9.5 10.0 9.8 1.4 181 chr3R 16582860 intron Scp2 - chr3R 16582950 intron Scp2 - chr3R 16583041 intron Scp2 - chr3R_15_16580001 chr3R_16580001 RAL-301_125b 3510 chr3R 16633649 16633678 chr3R 16633798 16633828 10 148 22.0 21.0 21.5 0.4 179 chr3R 16633649 intron Fas1 + chr3R 16633738 intron Fas1 + chr3R 16633828 intron Fas1 + chr3R_10_16630001 chr3R_16630001 RAL-301_125b 3511 chr3R 16703731 16703810 chr3R 16703871 16703912 18 135 5.5 8.5 7.0 2.2 181 chr3R 16703731 intron Ubx - chr3R 16703822 intron Ubx - chr3R 16703912 intron Ubx - chr3R_18_16700001 chr3R_16700001 RAL-301_125b 3512 chr3R 16732115 16732174 chr3R 16732261 16732320 24 146 2.0 0.5 1.2 10.9 205 chr3R 16732115 intron Ubx - chr3R 16732218 intron Ubx - chr3R 16732320 intron Ubx - chr3R_24_16730001 chr3R_16730001 RAL-301_125b 3513 chr3R 16734825 16734896 chr3R 16734958 16735029 23 133 3.5 9.5 6.5 3.1 204 chr3R 16734825 intergenic Ubx - chr3R 16734927 intergenic not near genes chr3R 16735029 intergenic not near genes chr3R_23_16730001 chr3R_16730001 RAL-301_125b 3514 chr3R 16756276 16756323 chr3R 16762517 16762564 diver 19 6238 8.0 4.0 6.0 2.7 6288 chr3R 16756276 intron bxd - chr3R 16759420 intron bxd - chr3R 16762564 intron bxd - chr3R_19_16755001 chr3R_16755001 RAL-301_125b 3515 chr3R 16756326 16756352 chr3R 16762510 16762557 diver 5 6214 5.0 3.5 4.2 1.0 6231 chr3R 16756326 intron bxd - chr3R 16759442 intron bxd - chr3R 16762557 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-301_125b 3516 chr3R 16794251 16794317 chr3R 16794391 16794457 28 140 10.5 11.0 10.8 2.4 206 chr3R 16794251 intergenic not near genes chr3R 16794354 intergenic not near genes chr3R 16794457 intergenic not near genes chr3R_28_16790001 chr3R_16790001 RAL-301_125b 3517 chr3R 16806151 16806177 chr3R 16806285 16806313 9 135 14.0 10.0 12.0 0.7 162 chr3R 16806151 intergenic not near genes chr3R 16806232 intergenic not near genes chr3R 16806313 intergenic not near genes chr3R_9_16805001 chr3R_16805001 RAL-301_125b 3518 chr3R 16806182 16806216 chr3R 16806280 16806330 16 118 6.0 9.5 7.8 1.8 148 chr3R 16806182 intergenic not near genes chr3R 16806256 intergenic not near genes chr3R 16806330 intergenic not near genes chr3R_16_16805001 chr3R_16805001 RAL-301_125b 3519 chr3R 16831521 16831593 chr3R 16831658 16831730 38 136 7.0 8.0 7.5 4.5 209 chr3R 16831521 3` UTR iab-8 - chr3R 16831626 3` UTR iab-8 - chr3R 16831730 3` UTR iab-8 - chr3R_38_16830001 chr3R_16830001 RAL-301_125b 3520 chr3R 17121490 17121551 chr3R 17121735 17121796 24 245 7.0 9.0 8.0 2.7 306 chr3R 17121490 intron cher - chr3R 17121643 intron,exon cher -,CG42779 + chr3R 17121796 intron,3` UTR cher -,CG42779 + chr3R_24_17120001 chr3R_17120001 RAL-301_125b 3521 chr3R 17123701 17123740 chr3R 17123852 17123891 8 151 13.0 0.0 6.5 1.1 190 chr3R 17123701 intron cher - chr3R 17123796 intron cher - chr3R 17123891 intron cher - chr3R_8_17120001 chr3R_17120001 RAL-301_125b 3522 chr3R 17176236 17176255 chr3R 17176372 17176391 8 136 17.5 8.5 13.0 0.6 155 chr3R 17176236 intron Mur89F - chr3R 17176314 intron Mur89F - chr3R 17176391 intron Mur89F - chr3R_8_17175001 chr3R_17175001 RAL-301_125b 3523 chr3R 17184691 17184752 chr3R 17184817 17184878 23 126 7.0 7.5 7.2 2.8 187 chr3R 17184691 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184878 intron Mur89F - chr3R_23_17180001 chr3R_17180001 RAL-301_125b 3524 chr3R 17208817 17208821 chr3R 17208943 17208947 4 126 23.0 8.0 15.5 0.2 130 chr3R 17208817 intergenic not near genes chr3R 17208882 intergenic not near genes chr3R 17208947 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-301_125b 3525 chr3R 17209657 17209702 chr3R 17209795 17209840 17 138 13.0 10.0 11.5 1.4 183 chr3R 17209657 intergenic not near genes chr3R 17209748 intergenic not near genes chr3R 17209840 intergenic not near genes chr3R_17_17205001 chr3R_17205001 RAL-301_125b 3526 chr3R 17259492 17259545 chr3R 17259621 17259674 18 129 4.5 7.0 5.8 2.6 182 chr3R 17259492 intron beat-IIb - chr3R 17259583 intron beat-IIb - chr3R 17259674 intron beat-IIb - chr3R_18_17255001 chr3R_17255001 RAL-301_125b 3527 chr3R 17294624 17294703 chr3R 17295101 17295186 BS 17 481 8.5 0.5 4.5 3.1 562 chr3R 17294624 intergenic not near genes chr3R 17294905 intergenic not near genes chr3R 17295186 intergenic not near genes chr3R_17_17290001 chr3R_17290001 RAL-301_125b 3528 chr3R 17312774 17312783 chr3R 17312909 17312918 4 135 23.5 6.5 15.0 0.2 144 chr3R 17312774 intergenic not near genes chr3R 17312846 intergenic not near genes chr3R 17312918 intergenic not near genes chr3R_4_17310001 chr3R_17310001 RAL-301_125b 3529 chr3R 17312786 17312849 chr3R 17312906 17312969 22 127 5.5 6.5 6.0 3.1 183 chr3R 17312786 intergenic not near genes chr3R 17312878 intergenic not near genes chr3R 17312969 intergenic not near genes chr3R_22_17310001 chr3R_17310001 RAL-301_125b 3530 chr3R 17317025 17317079 chr3R 17317399 17317421 5 362 33.0 20.5 26.8 0.2 396 chr3R 17317025 intergenic not near genes chr3R 17317223 intergenic not near genes chr3R 17317421 intergenic not near genes chr3R_5_17315001 chr3R_17315001 RAL-301_125b 3531 chr3R 17346651 17346710 chr3R 17348264 17348309 F-element 23 1612 8.5 8.0 8.2 2.5 1658 chr3R 17346651 intron beat-IIa - chr3R 17347480 intron beat-IIa - chr3R 17348309 intron beat-IIa - chr3R_23_17345001 chr3R_17345001 RAL-301_125b 3532 chr3R 17354781 17354817 chr3R 17354963 17354999 6 182 4.0 5.0 4.5 1.1 218 chr3R 17354781 intron beat-IIa - chr3R 17354890 intron beat-IIa - chr3R 17354999 intron beat-IIa - chr3R_6_17350001 chr3R_17350001 RAL-301_125b 3533 chr3R 17355444 17355455 chr3R 17355572 17355583 6 128 21.0 10.0 15.5 0.4 139 chr3R 17355444 intron beat-IIa - chr3R 17355514 intron beat-IIa - chr3R 17355583 intron beat-IIa - chr3R_6_17355001 chr3R_17355001 RAL-301_125b 3534 chr3R 17355456 17355523 chr3R 17355571 17355644 29 124 9.5 10.0 9.8 2.7 188 chr3R 17355456 intron beat-IIa - chr3R 17355550 intron beat-IIa - chr3R 17355644 intron beat-IIa - chr3R_29_17355001 chr3R_17355001 RAL-301_125b 3535 chr3R 17360115 17360180 chr3R 17360247 17360312 32 132 8.0 3.0 5.5 4.9 197 chr3R 17360115 intron beat-IIa - chr3R 17360214 intron beat-IIa - chr3R 17360312 intron beat-IIa - chr3R_32_17360001 chr3R_17360001 RAL-301_125b 3536 chr3R 17371384 17371424 chr3R 17371486 17371504 6 97 5.0 5.0 5.0 1.0 120 chr3R 17371384 3` UTR CR44256 - chr3R 17371444 3` UTR CR44256 - chr3R 17371504 3` UTR CR44256 - chr3R_6_17370001 chr3R_17370001 RAL-301_125b 3537 chr3R 17461152 17461226 chr3R 17461284 17461351 28 131 6.0 7.0 6.5 3.7 199 chr3R 17461152 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461351 intergenic not near genes chr3R_28_17460001 chr3R_17460001 RAL-301_125b 3538 chr3R 17463106 17463179 chr3R 17463241 17463314 32 135 0.0 9.5 4.8 5.5 208 chr3R 17463106 intergenic not near genes chr3R 17463210 intergenic not near genes chr3R 17463314 intergenic not near genes chr3R_32_17460001 chr3R_17460001 RAL-301_125b 3539 chr3R 17509212 17509241 chr3R 17516804 17516829 412 12 7595 7.0 13.0 10.0 1.1 7617 chr3R 17509212 intergenic not near genes chr3R 17513020 intergenic not near genes chr3R 17516829 intergenic not near genes chr3R_12_17510001 chr3R_17510001 RAL-301_125b 3540 chr3R 17524863 17524931 chr3R 17524991 17525061 5 130 1.0 4.0 2.5 1.4 198 chr3R 17524863 intergenic not near genes chr3R 17524962 intergenic not near genes chr3R 17525061 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-301_125b 3541 chr3R 17591247 17591311 chr3R 17591733 17591797 F-element 25 484 11.0 8.5 9.8 2.3 550 chr3R 17591247 intergenic not near genes chr3R 17591522 intergenic not near genes chr3R 17591797 intergenic not near genes chr3R_25_17590001 chr3R_17590001 RAL-301_125b 3542 chr3R 17638265 17638340 chr3R 17638801 17638876 roo 19 536 8.0 7.0 7.5 2.2 611 chr3R 17638265 intron CG43175 + chr3R 17638570 intron CG43175 + chr3R 17638876 intron,intron CG43175 +,CR45222 + chr3R_19_17635001 chr3R_17635001 RAL-301_125b 3543 chr3R 17651837 17651904 chr3R 17651968 17652035 17 131 8.5 6.5 7.5 2.0 198 chr3R 17651837 intron CG14322 + chr3R 17651936 intron CG14322 + chr3R 17652035 intron CG14322 + chr3R_17_17650001 chr3R_17650001 RAL-301_125b 3544 chr3R 17701344 17701387 chr3R 17701477 17701519 15 127 11.0 4.0 7.5 1.8 175 chr3R 17701344 intron osa - chr3R 17701432 intron osa - chr3R 17701519 intron osa - chr3R_15_17700001 chr3R_17700001 RAL-301_125b 3545 chr3R 17725032 17725086 chr3R 17725176 17725216 10 137 4.5 0.0 2.2 3.1 184 chr3R 17725032 5` UTR Atg8b - chr3R 17725124 intergenic Atg8b - chr3R 17725216 intergenic Atg8b - chr3R_10_17725001 chr3R_17725001 RAL-301_125b 3546 chr3R 17739144 17739216 chr3R 17739276 17739303 27 125 12.0 12.5 12.2 2.0 159 chr3R 17739144 intron TyrRII + chr3R 17739224 intron TyrRII + chr3R 17739303 intron TyrRII + chr3R_27_17735001 chr3R_17735001 RAL-301_125b 3547 chr3R 17763181 17763193 chr3R 17763725 17763737 roo 5 544 9.5 18.5 14.0 0.3 556 chr3R 17763181 5` UTR TyrR - chr3R 17763459 intergenic TyrR - chr3R 17763737 intergenic not near genes chr3R_5_17760001 chr3R_17760001 RAL-301_125b 3548 chr3R 17823158 17823227 chr3R 17823285 17823354 21 127 8.5 8.5 8.5 2.2 196 chr3R 17823158 intron tinc + chr3R 17823256 intron tinc + chr3R 17823354 intron tinc + chr3R_21_17820001 chr3R_17820001 RAL-301_125b 3549 chr3R 17840401 17840417 chr3R 17840528 17840544 7 127 9.5 18.5 14.0 0.5 143 chr3R 17840401 intron tinc + chr3R 17840472 intron tinc + chr3R 17840544 intron tinc + chr3R_7_17840001 chr3R_17840001 RAL-301_125b 3550 chr3R 17895298 17895376 chr3R 17895437 17895517 21 141 8.5 4.5 6.5 2.8 219 chr3R 17895298 intron Rim - chr3R 17895408 intron Rim - chr3R 17895517 intron Rim - chr3R_21_17895001 chr3R_17895001 RAL-301_125b 3551 chr3R 17898323 17898352 chr3R 17898455 17898484 15 131 11.0 17.5 14.2 1.0 161 chr3R 17898323 intron Rim - chr3R 17898404 intron Rim - chr3R 17898484 intron Rim - chr3R_15_17895001 chr3R_17895001 RAL-301_125b 3552 chr3R 17899046 17899056 chr3R 17899174 17899184 4 128 14.5 8.5 11.5 0.3 138 chr3R 17899046 intron Rim - chr3R 17899115 intron Rim - chr3R 17899184 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-301_125b 3553 chr3R 17925816 17925888 chr3R 17927333 17927354 hobo 24 1513 11.5 10.5 11.0 2.0 1538 chr3R 17925816 intron cpo + chr3R 17926585 intron cpo + chr3R 17927354 intron cpo + chr3R_24_17925001 chr3R_17925001 RAL-301_125b 3554 chr3R 17958046 17958049 chr3R 17958162 17958178 5 125 0.5 16.0 8.2 0.5 132 chr3R 17958046 intron cpo + chr3R 17958112 intron cpo + chr3R 17958178 intron cpo + chr3R_5_17955001 chr3R_17955001 RAL-301_125b 3555 chr3R 17976472 17976532 chr3R 17976599 17976659 28 127 5.5 10.0 7.8 3.2 187 chr3R 17976472 intron cpo + chr3R 17976566 intron cpo + chr3R 17976659 intron cpo + chr3R_28_17975001 chr3R_17975001 RAL-301_125b 3556 chr3R 18002990 18003039 chr3R 18003135 18003185 11 142 10.5 0.0 5.2 1.8 195 chr3R 18002990 intron cpo + chr3R 18003088 intron cpo + chr3R 18003185 intron cpo + chr3R_11_18000001 chr3R_18000001 RAL-301_125b 3557 chr3R 18032732 18032807 chr3R 18040455 18040530 opus 18 7723 0.0 6.5 3.2 4.3 7798 chr3R 18032732 intergenic not near genes chr3R 18036631 intergenic not near genes chr3R 18040530 intergenic not near genes chr3R_18_18035001 chr3R_18035001 RAL-301_125b 3558 chr3R 18061396 18061444 chr3R 18061538 18061586 17 142 6.5 0.0 3.2 4.0 190 chr3R 18061396 intergenic not near genes chr3R 18061491 intergenic not near genes chr3R 18061586 intergenic not near genes chr3R_17_18060001 chr3R_18060001 RAL-301_125b 3559 chr3R 18061562 18061588 chr3R 18063186 18063202 F-element 10 1623 0.0 5.5 2.8 2.6 1640 chr3R 18061562 intergenic not near genes chr3R 18062382 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_10_18060001 chr3R_18060001 RAL-301_125b 3560 chr3R 18067927 18068020 chr3R 18068073 18068152 26 139 0.0 5.5 2.8 6.8 225 chr3R 18067927 intergenic not near genes chr3R 18068040 intergenic not near genes chr3R 18068152 intergenic not near genes chr3R_26_18065001 chr3R_18065001 RAL-301_125b 3561 chr3R 18078108 18078182 chr3R 18078237 18078309 30 128 9.5 8.5 9.0 3.0 201 chr3R 18078108 intergenic not near genes chr3R 18078208 intergenic not near genes chr3R 18078309 intergenic not near genes chr3R_30_18075001 chr3R_18075001 RAL-301_125b 3562 chr3R 18088338 18088399 chr3R 18088471 18088528 29 131 11.5 14.0 12.8 2.1 190 chr3R 18088338 intergenic not near genes chr3R 18088433 intergenic not near genes chr3R 18088528 intergenic not near genes chr3R_29_18085001 chr3R_18085001 RAL-301_125b 3563 chr3R 18101330 18101390 chr3R 18101456 18101516 29 125 11.0 11.0 11.0 2.4 186 chr3R 18101330 intron sr + chr3R 18101423 intron sr + chr3R 18101516 intron sr + chr3R_29_18100001 chr3R_18100001 RAL-301_125b 3564 chr3R 18108200 18108224 chr3R 18108345 18108369 11 144 12.5 8.0 10.2 1.0 169 chr3R 18108200 intron sr + chr3R 18108284 intron sr + chr3R 18108369 intron sr + chr3R_11_18105001 chr3R_18105001 RAL-301_125b 3565 chr3R 18108225 18108265 chr3R 18108339 18108410 20 137 5.0 5.5 5.2 3.2 185 chr3R 18108225 intron sr + chr3R 18108318 intron sr + chr3R 18108410 intron sr + chr3R_20_18105001 chr3R_18105001 RAL-301_125b 3566 chr3R 18122839 18122914 chr3R 18122967 18123041 30 127 6.0 7.0 6.5 4.0 202 chr3R 18122839 intron sr + chr3R 18122940 intron sr + chr3R 18123041 intron sr + chr3R_30_18120001 chr3R_18120001 RAL-301_125b 3567 chr3R 18136187 18136222 chr3R 18136351 18136386 9 164 14.0 10.5 12.2 0.7 199 chr3R 18136187 intergenic not near genes chr3R 18136286 intergenic not near genes chr3R 18136386 intergenic not near genes chr3R_9_18135001 chr3R_18135001 RAL-301_125b 3568 chr3R 18142440 18142477 chr3R 18142571 18142608 9 129 12.5 9.5 11.0 0.8 168 chr3R 18142440 intergenic not near genes chr3R 18142524 intergenic not near genes chr3R 18142608 intergenic not near genes chr3R_9_18140001 chr3R_18140001 RAL-301_125b 3569 chr3R 18142491 18142513 chr3R 18142622 18142644 6 131 6.0 22.5 14.2 0.4 153 chr3R 18142491 intergenic not near genes chr3R 18142568 intergenic not near genes chr3R 18142644 intergenic not near genes chr3R_6_18140001 chr3R_18140001 RAL-301_125b 3570 chr3R 18143528 18143590 chr3R 18143667 18143729 22 139 9.0 6.5 7.8 2.5 201 chr3R 18143528 intergenic not near genes chr3R 18143628 intergenic not near genes chr3R 18143729 intergenic not near genes chr3R_22_18140001 chr3R_18140001 RAL-301_125b 3571 chr3R 18281400 18281429 chr3R 18281499 18281555 6 113 10.0 11.5 10.8 0.5 155 chr3R 18281400 intron eIF-1A + chr3R 18281478 intron eIF-1A + chr3R 18281555 intron eIF-1A + chr3R_6_18280001 chr3R_18280001 RAL-301_125b 3572 chr3R 18302941 18302957 chr3R 18303095 18303111 10 154 19.0 0.0 9.5 1.0 170 chr3R 18302941 intergenic CG7126 -,PKD - chr3R 18303026 intergenic CG7126 -,PKD - chr3R 18303111 intergenic PKD -,CG7126 - chr3R_10_18300001 chr3R_18300001 RAL-301_125b 3573 chr3R 18309628 18309636 chr3R 18309757 18309765 5 129 13.0 4.5 8.8 0.5 137 chr3R 18309628 intron PKD - chr3R 18309696 intron PKD - chr3R 18309765 intron PKD - chr3R_5_18305001 chr3R_18305001 RAL-301_125b 3574 chr3R 18352532 18352602 chr3R 18352675 18352745 30 142 10.0 8.0 9.0 3.0 213 chr3R 18352532 intron CG15803 - chr3R 18352638 intron CG15803 - chr3R 18352745 3` UTR CG15803 - chr3R_30_18350001 chr3R_18350001 RAL-301_125b 3575 chr3R 18449352 18449363 chr3R 18449479 18449490 4 127 19.0 10.0 14.5 0.3 138 chr3R 18449352 intron fru - chr3R 18449421 intron fru - chr3R 18449490 intron fru - chr3R_4_18445001 chr3R_18445001 RAL-301_125b 3576 chr3R 18449364 18449413 chr3R 18449476 18449540 21 126 11.5 10.5 11.0 1.8 176 chr3R 18449364 intron fru - chr3R 18449452 intron fru - chr3R 18449540 intron fru - chr3R_21_18445001 chr3R_18445001 RAL-301_125b 3577 chr3R 18472237 18472298 chr3R 18472388 18472449 21 151 6.0 2.0 4.0 4.2 212 chr3R 18472237 intron fru - chr3R 18472343 intron fru - chr3R 18472449 intron fru - chr3R_21_18470001 chr3R_18470001 RAL-301_125b 3578 chr3R 18473177 18473254 chr3R 18473326 18473392 9 142 0.0 7.0 3.5 2.0 215 chr3R 18473177 intron fru - chr3R 18473284 intron fru - chr3R 18473392 intron fru - chr3R_9_18470001 chr3R_18470001 RAL-301_125b 3579 chr3R 18500714 18500734 chr3R 18500885 18500905 11 170 0.0 32.0 16.0 0.6 191 chr3R 18500714 intron fru - chr3R 18500810 intron fru - chr3R 18500905 intron fru - chr3R_11_18500001 chr3R_18500001 RAL-301_125b 3580 chr3R 18501547 18501616 chr3R 18501678 18501747 22 131 13.5 8.0 10.8 1.9 200 chr3R 18501547 intron fru - chr3R 18501647 intron fru - chr3R 18501747 intron fru - chr3R_22_18500001 chr3R_18500001 RAL-301_125b 3581 chr3R 18528322 18528398 chr3R 18528459 18528489 24 135 5.5 7.0 6.2 3.3 167 chr3R 18528322 intron fru - chr3R 18528406 intron fru - chr3R 18528489 intron fru - chr3R_24_18525001 chr3R_18525001 RAL-301_125b 3582 chr3R 18559384 18559520 chr3R 18559511 18559666 13 133 0.0 0.0 0.0 13.0 282 chr3R 18559384 intergenic CG7691 + chr3R 18559525 intergenic CG7691 + chr3R 18559666 intergenic CG7691 + chr3R_13_18555001 chr3R_18555001 RAL-301_125b 3583 chr3R 18562525 18562570 chr3R 18562694 18562739 21 169 9.5 10.0 9.8 1.9 214 chr3R 18562525 intergenic not near genes chr3R 18562632 intergenic not near genes chr3R 18562739 intergenic not near genes chr3R_21_18560001 chr3R_18560001 RAL-301_125b 3584 chr3R 18579523 18579540 chr3R 18579651 18579667 4 128 29.5 1.5 15.5 0.2 144 chr3R 18579523 intron,intron CG7694 +,fray + chr3R 18579595 intron,intron CG7694 +,fray + chr3R 18579667 intron,intron CG7694 +,fray + chr3R_4_18575001 chr3R_18575001 RAL-301_125b 3585 chr3R 18606461 18606520 chr3R 18610743 18610802 F-element 32 4282 12.0 12.5 12.2 2.4 4341 chr3R 18606461 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610802 intron,intron qin +,CG14304 - chr3R_32_18605001 chr3R_18605001 RAL-301_125b 3586 chr3R 18616643 18616684 chr3R 18616793 18616834 14 149 6.0 8.0 7.0 1.8 191 chr3R 18616643 intron,intron qin +,CG14304 - chr3R 18616738 intron,intron qin +,CG14304 - chr3R 18616834 intron,intron,3` UTR qin +,CG14304 -,CG7695 - chr3R_14_18615001 chr3R_18615001 RAL-301_125b 3587 chr3R 18622730 18622813 chr3R 18622856 18622944 17 121 4.5 1.0 2.8 4.5 214 chr3R 18622730 intron qin + chr3R 18622837 intron qin + chr3R 18622944 intron qin + chr3R_17_18620001 chr3R_18620001 RAL-301_125b 3588 chr3R 18660830 18660889 chr3R 18662880 18662915 7 2039 61.5 54.5 58.0 0.1 2085 chr3R 18660830 exon CstF-64 + chr3R 18661872 exon Cpsf73 - chr3R 18662915 exon Cpsf73 - chr3R_7_18660001 chr3R_18660001 RAL-301_125b 3589 chr3R 18729976 18730038 chr3R 18730102 18730164 26 121 5.0 7.0 6.0 3.7 188 chr3R 18729976 exon Cha + chr3R 18730070 intron Cha + chr3R 18730164 exon Cha + chr3R_26_18730001 chr3R_18730001 RAL-301_125b 3590 chr3R 18766732 18766803 chr3R 18766860 18766931 34 127 8.0 12.5 10.2 3.0 199 chr3R 18766732 intron CG7720 - chr3R 18766832 intron CG7720 - chr3R 18766931 intron CG7720 - chr3R_34_18765001 chr3R_18765001 RAL-301_125b 3591 chr3R 18770250 18770319 chr3R 18770382 18770451 32 132 7.0 8.5 7.8 3.6 201 chr3R 18770250 intron CG7720 - chr3R 18770350 intron CG7720 - chr3R 18770451 intron CG7720 - chr3R_32_18770001 chr3R_18770001 RAL-301_125b 3592 chr3R 18781647 18781720 chr3R 18781773 18781846 20 122 7.0 5.0 6.0 2.9 199 chr3R 18781647 intron CG7720 - chr3R 18781746 intron CG7720 - chr3R 18781846 intron CG7720 - chr3R_20_18780001 chr3R_18780001 RAL-301_125b 3593 chr3R 18792768 18792832 chr3R 18792900 18792965 13 133 4.0 0.0 2.0 4.3 197 chr3R 18792768 intron CG7720 - chr3R 18792866 intron CG7720 - chr3R 18792965 intron CG7720 - chr3R_13_18790001 chr3R_18790001 RAL-301_125b 3594 chr3R 18807280 18807314 chr3R 18807407 18807441 15 127 9.0 0.0 4.5 2.7 161 chr3R 18807280 exon CG18208 - chr3R 18807360 intron CG18208 - chr3R 18807441 intron CG18208 - chr3R_15_18805001 chr3R_18805001 RAL-301_125b 3595 chr3R 18812026 18812100 chr3R 18812154 18812228 23 126 11.5 10.5 11.0 1.9 202 chr3R 18812026 intron CG18208 - chr3R 18812127 intron CG18208 - chr3R 18812228 intron CG18208 - chr3R_23_18810001 chr3R_18810001 RAL-301_125b 3596 chr3R 18820468 18820544 chr3R 18820740 18820816 34 271 6.0 10.5 8.2 3.7 348 chr3R 18820468 intron CG18208 - chr3R 18820642 intron CG18208 - chr3R 18820816 intron CG18208 - chr3R_34_18820001 chr3R_18820001 RAL-301_125b 3597 chr3R 18839762 18839834 chr3R 18839896 18839949 33 132 8.0 7.5 7.8 3.7 187 chr3R 18839762 intron CG18208 - chr3R 18839856 intron CG18208 - chr3R 18839949 intron CG18208 - chr3R_33_18835001 chr3R_18835001 RAL-301_125b 3598 chr3R 18887564 18887598 chr3R 18887683 18887724 15 126 16.5 8.5 12.5 1.1 160 chr3R 18887564 intergenic not near genes chr3R 18887644 intergenic not near genes chr3R 18887724 intergenic not near genes chr3R_15_18885001 chr3R_18885001 RAL-301_125b 3599 chr3R 18893074 18893130 chr3R 18893207 18893258 14 131 0.0 12.5 6.2 1.9 184 chr3R 18893074 intergenic not near genes chr3R 18893166 intergenic not near genes chr3R 18893258 intergenic not near genes chr3R_14_18890001 chr3R_18890001 RAL-301_125b 3600 chr3R 18933765 18933803 chr3R 18933883 18933907 7 120 17.5 12.0 14.8 0.4 142 chr3R 18933765 intron CG42613 + chr3R 18933836 intron CG42613 + chr3R 18933907 intron CG42613 + chr3R_7_18930001 chr3R_18930001 RAL-301_125b 3601 chr3R 18993881 18993896 chr3R 18994005 18994024 14 128 18.0 11.0 14.5 0.9 143 chr3R 18993881 intron gukh + chr3R 18993952 intron gukh + chr3R 18994024 intron gukh + chr3R_14_18990001 chr3R_18990001 RAL-301_125b 3602 chr3R 18993902 18993941 chr3R 18994003 18994076 17 130 8.0 11.0 9.5 1.6 174 chr3R 18993902 intron gukh + chr3R 18993989 intron gukh + chr3R 18994076 intron gukh + chr3R_17_18990001 chr3R_18990001 RAL-301_125b 3603 chr3R 19077180 19077248 chr3R 19077537 19077615 24 366 6.5 8.5 7.5 2.8 435 chr3R 19077180 intron cdi - chr3R 19077398 intron cdi - chr3R 19077615 intron cdi - chr3R_24_19075001 chr3R_19075001 RAL-301_125b 3604 chr3R 19112959 19113010 chr3R 19113115 19113167 13 155 8.0 0.0 4.0 2.6 208 chr3R 19112959 intron CG6040 + chr3R 19113063 intron CG6040 + chr3R 19113167 intron CG6040 + chr3R_13_19110001 chr3R_19110001 RAL-301_125b 3605 chr3R 19128827 19128841 chr3R 19129011 19129025 5 184 0.0 9.0 4.5 0.9 198 chr3R 19128827 intron CG6040 + chr3R 19128926 intron CG6040 + chr3R 19129025 intron CG6040 + chr3R_5_19125001 chr3R_19125001 RAL-301_125b 3606 chr3R 19139732 19139805 chr3R 19139877 19139948 30 145 8.5 12.0 10.2 2.7 216 chr3R 19139732 3` UTR Ppcs - chr3R 19139840 3` UTR Ppcs - chr3R 19139948 3` UTR Ppcs - chr3R_30_19135001 chr3R_19135001 RAL-301_125b 3607 chr3R 19163030 19163324 chr3R 19163162 19163426 7 124 17.0 5.5 11.2 0.6 396 chr3R 19163030 intergenic not near genes chr3R 19163228 intergenic not near genes chr3R 19163426 intergenic not near genes chr3R_7_19160001 chr3R_19160001 RAL-301_125b 3608 chr3R 19193002 19193003 chr3R 19197285 19197356 F-element 8 4317 1.0 5.0 3.0 2.0 4354 chr3R 19193002 intron CG31475 + chr3R 19195179 intron CG31475 + chr3R 19197356 intron CG31475 + chr3R_8_19195001 chr3R_19195001 RAL-301_125b 3609 chr3R 19208649 19208663 chr3R 19208786 19208800 5 137 10.5 0.0 5.2 0.8 151 chr3R 19208649 intergenic not near genes chr3R 19208724 intergenic not near genes chr3R 19208800 intergenic not near genes chr3R_5_19205001 chr3R_19205001 RAL-301_125b 3610 chr3R 19248837 19248844 chr3R 19248967 19248974 8 130 30.5 0.0 15.2 0.5 137 chr3R 19248837 intergenic not near genes chr3R 19248906 intergenic not near genes chr3R 19248974 intergenic not near genes chr3R_8_19245001 chr3R_19245001 RAL-301_125b 3611 chr3R 19248846 19248905 chr3R 19248961 19249045 15 134 13.5 0.0 6.8 1.9 199 chr3R 19248846 intergenic not near genes chr3R 19248946 intergenic not near genes chr3R 19249045 intergenic not near genes chr3R_15_19245001 chr3R_19245001 RAL-301_125b 3612 chr3R 19251960 19252034 chr3R 19252100 19252148 32 139 6.5 11.0 8.8 3.3 188 chr3R 19251960 intergenic not near genes chr3R 19252054 intergenic not near genes chr3R 19252148 intergenic not near genes chr3R_32_19250001 chr3R_19250001 RAL-301_125b 3613 chr3R 19276883 19276945 chr3R 19277013 19277075 36 130 13.0 8.5 10.8 3.1 192 chr3R 19276883 intergenic not near genes chr3R 19276979 intergenic not near genes chr3R 19277075 intergenic not near genes chr3R_36_19275001 chr3R_19275001 RAL-301_125b 3614 chr3R 19290872 19290879 chr3R 19291005 19291012 7 133 0.0 9.0 4.5 1.3 140 chr3R 19290872 intergenic not near genes chr3R 19290942 intergenic not near genes chr3R 19291012 intergenic not near genes chr3R_7_19290001 chr3R_19290001 RAL-301_125b 3615 chr3R 19337158 19337210 chr3R 19337296 19337303 10 131 10.0 12.5 11.2 0.8 145 chr3R 19337158 intergenic not near genes chr3R 19337230 intergenic not near genes chr3R 19337303 intergenic not near genes chr3R_10_19335001 chr3R_19335001 RAL-301_125b 3616 chr3R 19344617 19344695 chr3R 19344802 19344880 24 185 8.0 7.5 7.8 2.7 263 chr3R 19344617 intergenic not near genes chr3R 19344748 intergenic not near genes chr3R 19344880 intergenic not near genes chr3R_24_19340001 chr3R_19340001 RAL-301_125b 3617 chr3R 19417498 19417558 chr3R 19417636 19417706 25 140 1.0 5.0 3.0 6.2 208 chr3R 19417498 intron CG31221 + chr3R 19417602 intron CG31221 + chr3R 19417706 intron CG31221 + chr3R_25_19415001 chr3R_19415001 RAL-301_125b 3618 chr3R 19427424 19427433 chr3R 19427551 19427560 4 127 16.5 0.0 8.2 0.4 136 chr3R 19427424 intron CG31221 + chr3R 19427492 intron CG31221 + chr3R 19427560 intron CG31221 + chr3R_4_19425001 chr3R_19425001 RAL-301_125b 3619 chr3R 19431066 19431126 chr3R 19431351 19431411 34 283 8.5 12.5 10.5 3.0 345 chr3R 19431066 intron CG31221 + chr3R 19431238 intron CG31221 + chr3R 19431411 intron CG31221 + chr3R_34_19430001 chr3R_19430001 RAL-301_125b 3620 chr3R 19431451 19431499 chr3R 19431587 19431633 17 135 8.0 12.5 10.2 1.5 182 chr3R 19431451 intron CG31221 + chr3R 19431542 intron CG31221 + chr3R 19431633 intron CG31221 + chr3R_17_19430001 chr3R_19430001 RAL-301_125b 3621 chr3R 19430634 19430670 chr3R 19434856 19434933 26 4224 49.0 54.5 51.8 0.5 4299 chr3R 19430634 intron CG31221 + chr3R 19432784 intron CG31221 + chr3R 19434933 intron CG31221 + chr3R_26_19430001 chr3R_19430001 RAL-301_125b 3622 chr3R 19440187 19440193 chr3R 19440317 19440323 5 130 19.0 5.5 12.2 0.4 136 chr3R 19440187 intron CG31221 + chr3R 19440255 intron CG31221 + chr3R 19440323 intron CG31221 + chr3R_5_19440001 chr3R_19440001 RAL-301_125b 3623 chr3R 19524617 19524632 chr3R 19524747 19524762 5 130 14.5 11.0 12.8 0.4 145 chr3R 19524617 intron Dys + chr3R 19524690 intron Dys + chr3R 19524762 intron Dys + chr3R_5_19520001 chr3R_19520001 RAL-301_125b 3624 chr3R 19602525 19602598 chr3R 19602655 19602728 29 129 7.0 5.0 6.0 4.1 203 chr3R 19602525 exon CG7333 + chr3R 19602626 3` UTR CG7333 + chr3R 19602728 intergenic CG7333 + chr3R_29_19600001 chr3R_19600001 RAL-301_125b 3625 chr3R 19633265 19633273 chr3R 19633401 19633409 5 136 11.0 16.5 13.8 0.3 144 chr3R 19633265 intergenic subdued - chr3R 19633337 intergenic subdued - chr3R 19633409 intergenic subdued - chr3R_5_19630001 chr3R_19630001 RAL-301_125b 3626 chr3R 19633274 19633321 chr3R 19633389 19633456 18 134 9.5 15.0 12.2 1.4 182 chr3R 19633274 intergenic subdued - chr3R 19633365 intergenic subdued - chr3R 19633456 3` UTR subdued - chr3R_18_19630001 chr3R_19630001 RAL-301_125b 3627 chr3R 19744197 19744211 chr3R 19749493 19749507 Rt1a 7 5296 15.0 10.0 12.5 0.5 5310 chr3R 19744197 intron,intron GluClalpha +,CR43488 - chr3R 19746852 intron GluClalpha + chr3R 19749507 intron GluClalpha + chr3R_7_19745001 chr3R_19745001 RAL-301_125b 3628 chr3R 19827488 19827558 chr3R 19827624 19827694 17 136 6.5 10.0 8.2 1.8 206 chr3R 19827488 intron bnl - chr3R 19827591 intron bnl - chr3R 19827694 exon bnl - chr3R_17_19825001 chr3R_19825001 RAL-301_125b 3629 chr3R 19908220 19908297 chr3R 19908354 19908431 13 134 0.0 7.5 3.8 2.7 211 chr3R 19908220 intron RhoGAP92B + chr3R 19908326 intron RhoGAP92B + chr3R 19908431 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_13_19905001 chr3R_19905001 RAL-301_125b 3630 chr3R 19951942 19951972 chr3R 19952090 19952120 INE-1 12 148 17.5 9.5 13.5 0.8 178 chr3R 19951942 intron Hs6st - chr3R 19952031 intron Hs6st - chr3R 19952120 intron Hs6st - chr3R_12_19950001 chr3R_19950001 RAL-301_125b 3631 chr3R 19953908 19953925 chr3R 19954032 19954052 7 126 24.0 10.5 17.2 0.4 144 chr3R 19953908 intron Hs6st - chr3R 19953980 intron Hs6st - chr3R 19954052 intron Hs6st - chr3R_7_19950001 chr3R_19950001 RAL-301_125b 3632 chr3R 19953927 19953977 chr3R 19954029 19954079 16 111 10.5 11.5 11.0 1.3 152 chr3R 19953927 intron Hs6st - chr3R 19954003 intron Hs6st - chr3R 19954079 intron Hs6st - chr3R_16_19950001 chr3R_19950001 RAL-301_125b 3633 chr3R 19957226 19957288 chr3R 19957349 19957414 21 122 12.0 8.5 10.2 1.9 188 chr3R 19957226 intron Hs6st - chr3R 19957320 intron Hs6st - chr3R 19957414 intron Hs6st - chr3R_21_19955001 chr3R_19955001 RAL-301_125b 3634 chr3R 20002832 20002898 chr3R 20002988 20003054 27 154 7.5 7.0 7.2 3.3 222 chr3R 20002832 intron Hs6st - chr3R 20002943 intron Hs6st - chr3R 20003054 intron Hs6st - chr3R_27_20000001 chr3R_20000001 RAL-301_125b 3635 chr3R 20060584 20060651 chr3R 20060717 20060784 26 129 9.0 6.5 7.8 3.0 200 chr3R 20060584 intergenic not near genes chr3R 20060684 intergenic not near genes chr3R 20060784 intergenic not near genes chr3R_26_20060001 chr3R_20060001 RAL-301_125b 3636 chr3R 20109487 20109560 chr3R 20114741 20114816 copia 15 5255 5.0 8.5 6.8 1.9 5329 chr3R 20109487 intergenic not near genes chr3R 20112152 intergenic not near genes chr3R 20114816 intergenic CG10887 + chr3R_15_20110001 chr3R_20110001 RAL-301_125b 3637 chr3R 20156654 20156716 chr3R 20165874 20165915 roo 22 9217 6.5 8.0 7.2 2.7 9261 chr3R 20156654 intergenic not near genes chr3R 20161284 intergenic not near genes chr3R 20165915 intergenic not near genes chr3R_22_20160001 chr3R_20160001 RAL-301_125b 3638 chr3R 20195185 20195259 chr3R 20195321 20195391 33 123 9.0 11.5 10.2 2.9 206 chr3R 20195185 intergenic not near genes chr3R 20195288 intergenic not near genes chr3R 20195391 intergenic not near genes chr3R_33_20195001 chr3R_20195001 RAL-301_125b 3639 chr3R 20197070 20197115 chr3R 20197197 20197242 19 127 14.5 10.0 12.2 1.4 172 chr3R 20197070 intergenic not near genes chr3R 20197156 intergenic not near genes chr3R 20197242 intergenic not near genes chr3R_19_20195001 chr3R_20195001 RAL-301_125b 3640 chr3R 20197116 20197146 chr3R 20197192 20197267 17 124 9.5 10.5 10.0 1.5 151 chr3R 20197116 intergenic not near genes chr3R 20197192 intergenic not near genes chr3R 20197267 intergenic not near genes chr3R_17_20195001 chr3R_20195001 RAL-301_125b 3641 chr3R 20203908 20203921 chr3R 20204039 20204052 9 131 4.5 11.0 7.8 1.0 144 chr3R 20203908 intergenic not near genes chr3R 20203980 intergenic not near genes chr3R 20204052 intergenic not near genes chr3R_9_20200001 chr3R_20200001 RAL-301_125b 3642 chr3R 20205518 20205591 chr3R 20205690 20205763 26 171 12.0 6.0 9.0 2.6 245 chr3R 20205518 intron Nlg4 + chr3R 20205640 intron Nlg4 + chr3R 20205763 intron Nlg4 + chr3R_26_20205001 chr3R_20205001 RAL-301_125b 3643 chr3R 20205883 20205927 chr3R 20206017 20206061 8 134 4.5 6.0 5.2 1.3 178 chr3R 20205883 intron Nlg4 + chr3R 20205972 intron Nlg4 + chr3R 20206061 intron Nlg4 + chr3R_8_20205001 chr3R_20205001 RAL-301_125b 3644 chr3R 20230278 20230350 chr3R 20230409 20230481 30 131 8.5 10.5 9.5 2.9 203 chr3R 20230278 intron Nlg4 + chr3R 20230380 intron Nlg4 + chr3R 20230481 intron Nlg4 + chr3R_30_20230001 chr3R_20230001 RAL-301_125b 3645 chr3R 20245239 20245295 chr3R 20248899 20248955 F-element 24 3660 12.5 0.0 6.2 3.3 3716 chr3R 20245239 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248955 intergenic not near genes chr3R_24_20245001 chr3R_20245001 RAL-301_125b 3646 chr3R 20266503 20266536 chr3R 20273010 20273057 Burdock 19 6520 2.0 14.5 8.2 2.1 6554 chr3R 20266503 intron cic + chr3R 20269780 intron cic + chr3R 20273057 intron cic + chr3R_19_20265001 chr3R_20265001 RAL-301_125b 3647 chr3R 20282226 20282299 chr3R 20282352 20282425 24 126 2.0 10.5 6.2 3.3 199 chr3R 20282226 intron cic + chr3R 20282326 intron cic + chr3R 20282425 intron cic + chr3R_24_20280001 chr3R_20280001 RAL-301_125b 3648 chr3R 20330955 20331025 chr3R 20331491 20331561 roo 34 536 12.0 17.5 14.8 2.2 606 chr3R 20330955 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331561 intergenic not near genes chr3R_34_20330001 chr3R_20330001 RAL-301_125b 3649 chr3R 20345330 20345400 chr3R 20345469 20345539 17 139 0.0 6.0 3.0 4.2 209 chr3R 20345330 intergenic not near genes chr3R 20345434 intergenic not near genes chr3R 20345539 intergenic not near genes chr3R_17_20345001 chr3R_20345001 RAL-301_125b 3650 chr3R 20394785 20394819 chr3R 20394911 20394945 8 126 5.0 6.0 5.5 1.2 160 chr3R 20394785 intron Gfrl - chr3R 20394865 intron Gfrl - chr3R 20394945 intron Gfrl - chr3R_8_20390001 chr3R_20390001 RAL-301_125b 3651 chr3R 20418042 20418111 chr3R 20418202 20418271 35 159 10.5 10.0 10.2 3.1 229 chr3R 20418042 intron Gfrl - chr3R 20418156 intron Gfrl - chr3R 20418271 intron Gfrl - chr3R_35_20415001 chr3R_20415001 RAL-301_125b 3652 chr3R 20434793 20434865 chr3R 20435028 20435100 28 235 8.0 5.5 6.8 3.6 307 chr3R 20434793 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435100 intron Gfrl - chr3R_28_20430001 chr3R_20430001 RAL-301_125b 3653 chr3R 20450067 20450145 chr3R 20450197 20450280 15 133 4.0 0.0 2.0 5.0 213 chr3R 20450067 intron Gfrl - chr3R 20450174 intron Gfrl - chr3R 20450280 intron Gfrl - chr3R_15_20450001 chr3R_20450001 RAL-301_125b 3654 chr3R 20475180 20475232 chr3R 20475318 20475370 19 138 10.5 11.5 11.0 1.6 190 chr3R 20475180 intron Gfrl - chr3R 20475275 intron Gfrl - chr3R 20475370 intron Gfrl - chr3R_19_20475001 chr3R_20475001 RAL-301_125b 3655 chr3R 20482400 20482447 chr3R 20482531 20482584 17 136 0.0 7.5 3.8 3.5 184 chr3R 20482400 intron Gfrl - chr3R 20482492 intron Gfrl - chr3R 20482584 intron Gfrl - chr3R_17_20480001 chr3R_20480001 RAL-301_125b 3656 chr3R 20498444 20498479 chr3R 20498576 20498611 12 132 12.0 15.0 13.5 0.8 167 chr3R 20498444 intergenic not near genes chr3R 20498528 intergenic not near genes chr3R 20498611 intergenic not near genes chr3R_12_20495001 chr3R_20495001 RAL-301_125b 3657 chr3R 20506550 20506605 chr3R 20507401 20507458 BS 34 852 16.0 18.0 17.0 1.9 908 chr3R 20506550 intergenic Or92a + chr3R 20507004 intergenic CG4288 - chr3R 20507458 3` UTR CG4288 - chr3R_34_20505001 chr3R_20505001 RAL-301_125b 3658 chr3R 20512952 20513032 chr3R 20515706 20515792 opus 28 2754 6.0 0.0 3.0 7.0 2840 chr3R 20512952 intergenic CG4288 - chr3R 20514372 intergenic not near genes chr3R 20515792 intergenic not near genes chr3R_28_20510001 chr3R_20510001 RAL-301_125b 3659 chr3R 20518255 20518271 chr3R 20518847 20518853 7 598 7.0 15.0 11.0 0.6 598 chr3R 20518255 intergenic not near genes chr3R 20518554 intergenic not near genes chr3R 20518853 intergenic not near genes chr3R_7_20515001 chr3R_20515001 RAL-301_125b 3660 chr3R 20580687 20580697 chr3R 20580814 20580824 12 127 27.0 12.0 19.5 0.6 137 chr3R 20580687 3` UTR,3` UTR Srp14 +,CG34008 - chr3R 20580756 3` UTR,exon Srp14 +,CG34008 - chr3R 20580824 exon CG34008 - chr3R_12_20580001 chr3R_20580001 RAL-301_125b 3661 chr3R 20594438 20594513 chr3R 20594578 20594657 18 141 8.0 0.0 4.0 3.6 219 chr3R 20594438 intron bon + chr3R 20594548 intron bon + chr3R 20594657 intron bon + chr3R_18_20590001 chr3R_20590001 RAL-301_125b 3662 chr3R 20596144 20596210 chr3R 20596281 20596347 42 137 12.5 13.5 13.0 3.0 203 chr3R 20596144 intron bon + chr3R 20596246 intron bon + chr3R 20596347 intron bon + chr3R_42_20595001 chr3R_20595001 RAL-301_125b 3663 chr3R 20684170 20684227 chr3R 20684304 20684361 33 134 14.0 6.5 10.2 2.9 191 chr3R 20684170 intergenic not near genes chr3R 20684266 intergenic not near genes chr3R 20684361 intergenic not near genes chr3R_33_20680001 chr3R_20680001 RAL-301_125b 3664 chr3R 20702187 20702260 chr3R 20702853 20702927 21 665 11.0 6.5 8.8 2.1 740 chr3R 20702187 intron Oamb - chr3R 20702557 intron Oamb - chr3R 20702927 intron Oamb - chr3R_21_20700001 chr3R_20700001 RAL-301_125b 3665 chr3R 20707696 20707768 chr3R 20707961 20708033 35 265 8.5 6.0 7.2 4.3 337 chr3R 20707696 intron Oamb - chr3R 20707864 intron Oamb - chr3R 20708033 intron Oamb - chr3R_35_20705001 chr3R_20705001 RAL-301_125b 3666 chr3R 20722808 20722884 chr3R 20722985 20723041 24 174 7.5 8.0 7.8 2.7 233 chr3R 20722808 intergenic not near genes chr3R 20722924 intergenic not near genes chr3R 20723041 intergenic not near genes chr3R_24_20720001 chr3R_20720001 RAL-301_125b 3667 chr3R 20730879 20731048 chr3R 20731029 20731182 27 143 0.0 0.0 0.0 27.0 303 chr3R 20730879 intergenic not near genes chr3R 20731030 intergenic not near genes chr3R 20731182 intergenic CG31205 + chr3R_27_20730001 chr3R_20730001 RAL-301_125b 3668 chr3R 20771703 20771713 chr3R 20771834 20771844 10 131 0.0 25.5 12.8 0.7 141 chr3R 20771703 intron,intron Syp +,Takl1 - chr3R 20771774 intron,intron Syp +,Takl1 - chr3R 20771844 intron,exon Syp +,Takl1 - chr3R_10_20770001 chr3R_20770001 RAL-301_125b 3669 chr3R 20787388 20787458 chr3R 20787529 20787599 28 141 10.0 10.0 10.0 2.5 211 chr3R 20787388 intron Syp + chr3R 20787494 intron Syp + chr3R 20787599 intron Syp + chr3R_28_20785001 chr3R_20785001 RAL-301_125b 3670 chr3R 20848301 20848357 chr3R 20848441 20848492 8 139 0.0 12.0 6.0 1.1 191 chr3R 20848301 intergenic not near genes chr3R 20848396 intergenic not near genes chr3R 20848492 intergenic not near genes chr3R_8_20845001 chr3R_20845001 RAL-301_125b 3671 chr3R 20850047 20850113 chr3R 20850182 20850248 23 135 0.0 9.5 4.8 4.0 201 chr3R 20850047 intergenic RpS30 + chr3R 20850148 intergenic RpS30 + chr3R 20850248 intergenic RpS30 + chr3R_23_20850001 chr3R_20850001 RAL-301_125b 3672 chr3R 20854436 20854446 chr3R 20859281 20859291 Doc 6 4845 13.0 12.0 12.5 0.4 4855 chr3R 20854436 intron Ir93a - chr3R 20856864 intron Ir93a - chr3R 20859291 exon Ir93a - chr3R_6_20855001 chr3R_20855001 RAL-301_125b 3673 chr3R 20854447 20854520 chr3R 20859276 20859294 Doc 12 4828 3.0 11.0 7.0 1.5 4847 chr3R 20854447 intron Ir93a - chr3R 20856870 intron Ir93a - chr3R 20859294 exon Ir93a - chr3R_12_20855001 chr3R_20855001 RAL-301_125b 3674 chr3R 20916281 20916351 chr3R 20916470 20916535 36 189 12.0 9.0 10.5 3.1 254 chr3R 20916281 intron,intron CG31191 -,hdly + chr3R 20916408 intron,intron CG31191 -,hdly + chr3R 20916535 intron,intron CG31191 -,hdly + chr3R_36_20915001 chr3R_20915001 RAL-301_125b 3675 chr3R 20936038 20936108 chr3R 20936165 20936235 21 127 5.0 6.0 5.5 3.2 197 chr3R 20936038 intron CG31191 - chr3R 20936136 intron CG31191 - chr3R 20936235 intron CG31191 - chr3R_21_20935001 chr3R_20935001 RAL-301_125b 3676 chr3R 21107989 21108056 chr3R 21108300 21108367 9 311 5.0 7.5 6.2 1.2 378 chr3R 21107989 intergenic Sec15 -,rtet + chr3R 21108178 intergenic Sec15 -,rtet + chr3R 21108367 intergenic rtet +,Sec15 - chr3R_9_21105001 chr3R_21105001 RAL-301_125b 3677 chr3R 21141630 21141707 chr3R 21150161 21150212 Tirant 19 8521 8.5 2.0 5.2 3.1 8582 chr3R 21141630 intron SNF4Agamma + chr3R 21145921 intron SNF4Agamma + chr3R 21150212 intron SNF4Agamma + chr3R_19_21145001 chr3R_21145001 RAL-301_125b 3678 chr3R 21245804 21245862 chr3R 21245938 21245996 22 134 12.0 7.0 9.5 2.1 192 chr3R 21245804 intergenic CG5892 + chr3R 21245900 intergenic CG5892 + chr3R 21245996 intergenic not near genes chr3R_22_21245001 chr3R_21245001 RAL-301_125b 3679 chr3R 21464354 21464429 chr3R 21464490 21464563 26 134 6.0 6.5 6.2 3.6 209 chr3R 21464354 intergenic not near genes chr3R 21464458 intergenic not near genes chr3R 21464563 intergenic not near genes chr3R_26_21460001 chr3R_21460001 RAL-301_125b 3680 chr3R 21471972 21471979 chr3R 21472103 21472110 4 131 18.0 17.0 17.5 0.2 138 chr3R 21471972 intergenic not near genes chr3R 21472041 intergenic not near genes chr3R 21472110 intergenic not near genes chr3R_4_21470001 chr3R_21470001 RAL-301_125b 3681 chr3R 21471981 21471998 chr3R 21472101 21472129 12 129 14.5 17.5 16.0 0.7 148 chr3R 21471981 intergenic not near genes chr3R 21472055 intergenic not near genes chr3R 21472129 intergenic not near genes chr3R_12_21470001 chr3R_21470001 RAL-301_125b 3682 chr3R 21471999 21472028 chr3R 21472100 21472159 15 129 7.0 17.5 12.2 1.1 160 chr3R 21471999 intergenic not near genes chr3R 21472079 intergenic not near genes chr3R 21472159 intergenic not near genes chr3R_15_21470001 chr3R_21470001 RAL-301_125b 3683 chr3R 21624060 21624119 chr3R 21624204 21624263 24 143 12.5 13.0 12.8 1.7 203 chr3R 21624060 exon E2f - chr3R 21624162 intron E2f - chr3R 21624263 intron E2f - chr3R_24_21620001 chr3R_21620001 RAL-301_125b 3684 chr3R 21651205 21651254 chr3R 21651333 21651382 12 128 12.5 12.5 12.5 0.9 177 chr3R 21651205 intron E2f - chr3R 21651294 intron E2f - chr3R 21651382 intron E2f - chr3R_12_21650001 chr3R_21650001 RAL-301_125b 3685 chr3R 21733542 21733585 chr3R 21733672 21733715 4 130 30.5 49.0 39.8 0.1 173 chr3R 21733542 intergenic not near genes chr3R 21733628 intergenic not near genes chr3R 21733715 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-301_125b 3686 chr3R 21733943 21733956 chr3R 21734096 21734109 7 153 5.0 8.0 6.5 0.9 166 chr3R 21733943 intergenic not near genes chr3R 21734026 intergenic not near genes chr3R 21734109 intergenic not near genes chr3R_7_21730001 chr3R_21730001 RAL-301_125b 3687 chr3R 21734814 21734836 chr3R 21734940 21734962 14 126 23.5 1.0 12.2 1.1 148 chr3R 21734814 intergenic not near genes chr3R 21734888 intergenic not near genes chr3R 21734962 intergenic not near genes chr3R_14_21730001 chr3R_21730001 RAL-301_125b 3688 chr3R 21761080 21761151 chr3R 21768522 21768552 mdg1 27 7433 9.0 12.0 10.5 2.3 7472 chr3R 21761080 exon CG42335 + chr3R 21764816 intron CG42335 + chr3R 21768552 exon CG42335 + chr3R_27_21760001 chr3R_21760001 RAL-301_125b 3689 chr3R 21784810 21784891 chr3R 21784956 21785039 7 148 4.5 0.5 2.5 2.0 229 chr3R 21784810 3` UTR,3` UTR CASK -,CRG - chr3R 21784924 3` UTR,3` UTR CASK -,CRG - chr3R 21785039 3` UTR,3` UTR CASK -,CRG - chr3R_7_21780001 chr3R_21780001 RAL-301_125b 3690 chr3R 21800444 21800519 chr3R 21800579 21800653 38 135 10.5 12.0 11.2 3.1 209 chr3R 21800444 intron CASK - chr3R 21800548 intron CASK - chr3R 21800653 intron CASK - chr3R_38_21800001 chr3R_21800001 RAL-301_125b 3691 chr3R 21836516 21836571 chr3R 21836658 21836663 16 136 0.0 10.5 5.2 2.6 147 chr3R 21836516 intergenic not near genes chr3R 21836590 intergenic not near genes chr3R 21836663 intergenic not near genes chr3R_16_21835001 chr3R_21835001 RAL-301_125b 3692 chr3R 21883921 21884001 chr3R 21884048 21884117 29 126 6.5 8.0 7.2 3.5 196 chr3R 21883921 intron,3` UTR CR45046 -,CG31465 + chr3R 21884019 intron,3` UTR CR45046 -,fit - chr3R 21884117 exon fit - chr3R_29_21880001 chr3R_21880001 RAL-301_125b 3693 chr3R 21903614 21903627 chr3R 21903761 21903774 7 147 0.0 14.0 7.0 0.9 160 chr3R 21903614 intron CG6678 + chr3R 21903694 intron CG6678 + chr3R 21903774 intron CG6678 + chr3R_7_21900001 chr3R_21900001 RAL-301_125b 3694 chr3R 21907534 21907534 chr3R 24389465 24389465 5 2481931 38.0 33.5 35.8 0.1 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_5_23145001 chr3R_23145001 RAL-301_125b 3695 chr3R 21907534 21907534 chr3R 26659333 26659337 5 4751801 38.0 26.5 32.2 0.2 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_5_24280001 chr3R_24280001 RAL-301_125b 3696 chr3R 21907534 21907534 chr3R 28831801 28831802 18 6924268 38.0 41.0 39.5 0.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_18_25365001 chr3R_25365001 RAL-301_125b 3697 chr3R 8339246 8339247 chr3R 21907535 21907535 5 13568289 30.5 35.5 33.0 0.1 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-301_125b 3698 chr3R 9620955 9620956 chr3R 21907535 21907535 5 12286579 46.0 35.5 40.8 0.1 12286580 chr3R 9620955 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-301_125b 3699 chr3R 21907535 21907535 chr3R 26659333 26659337 7 4751800 37.0 26.5 31.8 0.2 4751802 chr3R 21907535 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_7_24280001 chr3R_24280001 RAL-301_125b 3700 chr3R 21907535 21907535 chr3R 28831801 28831802 35 6924267 37.0 41.0 39.0 0.9 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_35_25365001 chr3R_25365001 RAL-301_125b 3701 chr3R 21907536 21907536 chr3R 26659333 26659337 8 4751800 37.0 26.5 31.8 0.2 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_8_24280001 chr3R_24280001 RAL-301_125b 3702 chr3R 21907536 21907536 chr3R 28831801 28831802 40 6924266 37.0 41.0 39.0 1.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_40_25365001 chr3R_25365001 RAL-301_125b 3703 chr3R 21937179 21937232 chr3R 21937306 21937359 20 127 6.5 12.5 9.5 1.9 180 chr3R 21937179 intergenic not near genes chr3R 21937269 intergenic not near genes chr3R 21937359 intergenic not near genes chr3R_20_21935001 chr3R_21935001 RAL-301_125b 3704 chr3R 21989049 21989079 chr3R 21989222 21989252 14 173 12.0 15.5 13.8 0.9 203 chr3R 21989049 intron Eip93F + chr3R 21989150 intron Eip93F + chr3R 21989252 intron Eip93F + chr3R_14_21985001 chr3R_21985001 RAL-301_125b 3705 chr3R 22013043 22013064 chr3R 22013174 22013196 5 132 9.0 9.0 9.0 0.5 153 chr3R 22013043 intergenic not near genes chr3R 22013120 intergenic not near genes chr3R 22013196 intergenic not near genes chr3R_5_22010001 chr3R_22010001 RAL-301_125b 3706 chr3R 22117378 22117445 chr3R 22117498 22117571 27 125 8.5 1.0 4.8 4.7 193 chr3R 22117378 intergenic Ir94b -,Ir94c - chr3R 22117474 intergenic Ir94c -,Ir94b - chr3R 22117571 intergenic Ir94c -,Ir94b - chr3R_27_22115001 chr3R_22115001 RAL-301_125b 3707 chr3R 22117514 22117583 chr3R 22119082 22119151 29 1566 0.0 8.0 4.0 5.8 1637 chr3R 22117514 intergenic Ir94c -,Ir94b - chr3R 22118332 exon Ir94c - chr3R 22119151 exon Ir94c - chr3R_29_22115001 chr3R_22115001 RAL-301_125b 3708 chr3R 22234042 22234057 chr3R 22234169 22234184 5 126 14.5 9.0 11.8 0.4 142 chr3R 22234042 intron SKIP + chr3R 22234113 intron SKIP + chr3R 22234184 intron SKIP + chr3R_5_22230001 chr3R_22230001 RAL-301_125b 3709 chr3R 22234059 22234098 chr3R 22234163 22234225 13 121 7.5 8.5 8.0 1.4 166 chr3R 22234059 intron SKIP + chr3R 22234142 intron SKIP + chr3R 22234225 intron SKIP + chr3R_13_22230001 chr3R_22230001 RAL-301_125b 3710 chr3R 22234637 22234710 chr3R 22236006 22236079 pogo 41 1369 10.5 11.0 10.8 3.5 1442 chr3R 22234637 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236079 intron SKIP + chr3R_41_22235001 chr3R_22235001 RAL-301_125b 3711 chr3R 22239452 22239523 chr3R 22248562 22248621 roo 17 9099 6.5 3.0 4.8 2.9 9169 chr3R 22239452 intron SKIP + chr3R 22244036 intron SKIP + chr3R 22248621 intron SKIP + chr3R_17_22240001 chr3R_22240001 RAL-301_125b 3712 chr3R 22309951 22310031 chr3R 22310084 22310164 12 133 6.5 6.0 6.2 1.7 213 chr3R 22309951 3` UTR CG34377 - chr3R 22310058 3` UTR CG34377 - chr3R 22310164 3` UTR CG34377 - chr3R_12_22310001 chr3R_22310001 RAL-301_125b 3713 chr3R 22322547 22322611 chr3R 22322696 22322760 31 149 6.0 10.0 8.0 3.4 213 chr3R 22322547 intron CG34377 - chr3R 22322654 intron CG34377 - chr3R 22322760 intron CG34377 - chr3R_31_22320001 chr3R_22320001 RAL-301_125b 3714 chr3R 22431123 22431159 chr3R 22431659 22431695 18 535 8.5 8.5 8.5 1.9 572 chr3R 22431123 intron CG13847 - chr3R 22431409 intron CG13847 - chr3R 22431695 intron CG13847 - chr3R_18_22430001 chr3R_22430001 RAL-301_125b 3715 chr3R 22433053 22433088 chr3R 22433203 22433233 19 149 14.0 14.0 14.0 1.3 180 chr3R 22433053 intron CG13847 - chr3R 22433143 intron CG13847 - chr3R 22433233 intron CG13847 - chr3R_19_22430001 chr3R_22430001 RAL-301_125b 3716 chr3R 22450503 22450543 chr3R 22453193 22453220 NOF 20 2687 15.5 9.0 12.2 1.5 2717 chr3R 22450503 intron CG34376 + chr3R 22451862 intron CG34376 + chr3R 22453220 intron CG34376 + chr3R_20_22450001 chr3R_22450001 RAL-301_125b 3717 chr3R 22450544 22450570 chr3R 22453179 22453254 NOF 13 2682 10.0 7.0 8.5 1.4 2710 chr3R 22450544 intron CG34376 + chr3R 22451899 intron CG34376 + chr3R 22453254 intron CG34376 + chr3R_13_22450001 chr3R_22450001 RAL-301_125b 3718 chr3R 22507536 22507607 chr3R 22507668 22507740 25 130 6.0 9.0 7.5 2.9 204 chr3R 22507536 intron Octbeta1R + chr3R 22507638 intron Octbeta1R + chr3R 22507740 intron Octbeta1R + chr3R_25_22505001 chr3R_22505001 RAL-301_125b 3719 chr3R 22510520 22510587 chr3R 22510646 22510714 21 120 1.0 8.5 4.8 3.6 194 chr3R 22510520 intron Octbeta1R + chr3R 22510617 intron Octbeta1R + chr3R 22510714 intron Octbeta1R + chr3R_21_22510001 chr3R_22510001 RAL-301_125b 3720 chr3R 22538396 22538472 chr3R 22538531 22538607 29 134 7.5 11.5 9.5 2.8 211 chr3R 22538396 intron CG5326 - chr3R 22538502 intron CG5326 - chr3R 22538607 intron CG5326 - chr3R_29_22535001 chr3R_22535001 RAL-301_125b 3721 chr3R 22566273 22566346 chr3R 22566431 22566504 33 155 10.0 7.0 8.5 3.5 231 chr3R 22566273 intergenic not near genes chr3R 22566388 intergenic not near genes chr3R 22566504 intergenic not near genes chr3R_33_22565001 chr3R_22565001 RAL-301_125b 3722 chr3R 22648280 22648325 chr3R 22648409 22648454 15 128 16.5 0.5 8.5 1.6 174 chr3R 22648280 intron wake + chr3R 22648367 intron wake + chr3R 22648454 intron wake + chr3R_15_22645001 chr3R_22645001 RAL-301_125b 3723 chr3R 22657618 22657689 chr3R 22657748 22657817 19 129 10.0 9.0 9.5 1.8 199 chr3R 22657618 intron wake + chr3R 22657718 intron wake + chr3R 22657817 intron wake + chr3R_19_22655001 chr3R_22655001 RAL-301_125b 3724 chr3R 22730857 22730934 chr3R 22730985 22731062 19 127 9.0 8.0 8.5 2.0 205 chr3R 22730857 3` UTR CG45049 + chr3R 22730960 3` UTR CG45049 + chr3R 22731062 3` UTR CG45049 + chr3R_19_22730001 chr3R_22730001 RAL-301_125b 3725 chr3R 22733361 22733399 chr3R 22733735 22733773 16 374 9.0 17.5 13.2 1.1 412 chr3R 22733361 intron Takl2 - chr3R 22733567 exon Takl2 - chr3R 22733773 intron Takl2 - chr3R_16_22730001 chr3R_22730001 RAL-301_125b 3726 chr3R 22769047 22769121 chr3R 22769172 22769248 28 125 8.5 9.5 9.0 2.8 201 chr3R 22769047 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769148 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769248 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_28_22765001 chr3R_22765001 RAL-301_125b 3727 chr3R 22797720 22797936 chr3R 22797845 22798082 49 139 0.0 0.0 0.0 49.0 362 chr3R 22797720 intergenic not near genes chr3R 22797901 intergenic not near genes chr3R 22798082 intergenic not near genes chr3R_49_22795001 chr3R_22795001 RAL-301_125b 3728 chr3R 22802708 22802729 chr3R 22802849 22802870 15 141 14.5 0.0 7.2 1.8 162 chr3R 22802708 intergenic not near genes chr3R 22802789 intergenic not near genes chr3R 22802870 intergenic not near genes chr3R_15_22800001 chr3R_22800001 RAL-301_125b 3729 chr3R 22840409 22840464 chr3R 22840537 22840592 18 123 7.5 9.5 8.5 1.9 183 chr3R 22840409 intergenic not near genes chr3R 22840500 intergenic not near genes chr3R 22840592 intergenic not near genes chr3R_18_22840001 chr3R_22840001 RAL-301_125b 3730 chr3R 22846304 22846371 chr3R 22846832 22846899 24 527 8.5 11.5 10.0 2.2 595 chr3R 22846304 intergenic CG4704 - chr3R 22846602 intergenic CG4704 - chr3R 22846899 intergenic not near genes chr3R_24_22845001 chr3R_22845001 RAL-301_125b 3731 chr3R 22860102 22860172 chr3R 22860244 22860314 23 141 0.0 6.0 3.0 5.8 212 chr3R 22860102 intergenic not near genes chr3R 22860208 intergenic not near genes chr3R 22860314 intergenic not near genes chr3R_23_22860001 chr3R_22860001 RAL-301_125b 3732 chr3R 22867387 22867464 chr3R 22867568 22867625 35 175 8.5 5.5 7.0 4.4 238 chr3R 22867387 intergenic not near genes chr3R 22867506 intergenic not near genes chr3R 22867625 intergenic not near genes chr3R_35_22865001 chr3R_22865001 RAL-301_125b 3733 chr3R 22871385 22871461 chr3R 22871568 22871644 17 181 7.0 4.0 5.5 2.6 259 chr3R 22871385 intergenic not near genes chr3R 22871514 intergenic not near genes chr3R 22871644 intergenic not near genes chr3R_17_22870001 chr3R_22870001 RAL-301_125b 3734 chr3R 22881190 22881219 chr3R 22884946 22884975 Doc 9 3756 6.0 13.5 9.8 0.8 3785 chr3R 22881190 intergenic not near genes chr3R 22883082 intergenic not near genes chr3R 22884975 intergenic not near genes chr3R_9_22880001 chr3R_22880001 RAL-301_125b 3735 chr3R 22913166 22913232 chr3R 22913292 22913358 25 124 8.0 11.0 9.5 2.4 192 chr3R 22913166 intron klg + chr3R 22913262 intron klg + chr3R 22913358 intron klg + chr3R_25_22910001 chr3R_22910001 RAL-301_125b 3736 chr3R 22944622 22944648 chr3R 22944747 22944775 8 126 17.0 15.0 16.0 0.5 153 chr3R 22944622 intron klg + chr3R 22944698 intron klg + chr3R 22944775 intron klg + chr3R_8_22940001 chr3R_22940001 RAL-301_125b 3737 chr3R 22945916 22945973 chr3R 22946046 22946107 11 130 2.5 9.5 6.0 1.6 191 chr3R 22945916 intron klg + chr3R 22946012 intron klg + chr3R 22946107 intron klg + chr3R_11_22945001 chr3R_22945001 RAL-301_125b 3738 chr3R 23064130 23064171 chr3R 23064289 23064319 12 158 16.0 9.5 12.8 0.9 189 chr3R 23064130 exon CG17111 - chr3R 23064224 exon CG17111 - chr3R 23064319 exon CG17111 - chr3R_12_23060001 chr3R_23060001 RAL-301_125b 3739 chr3R 23064173 23064202 chr3R 23064286 23064341 13 149 6.5 9.0 7.8 1.5 168 chr3R 23064173 exon CG17111 - chr3R 23064257 intron CG17111 - chr3R 23064341 exon CG17111 - chr3R_13_23060001 chr3R_23060001 RAL-301_125b 3740 chr3R 23064830 23064895 chr3R 23064981 23065036 17 142 0.0 11.5 5.8 2.5 206 chr3R 23064830 intron CG17111 - chr3R 23064933 intron CG17111 - chr3R 23065036 intron CG17111 - chr3R_17_23060001 chr3R_23060001 RAL-301_125b 3741 chr3R 23070611 23070700 chr3R 23070741 23070828 16 134 0.0 0.5 0.2 13.3 217 chr3R 23070611 3` UTR CG13830 - chr3R 23070720 3` UTR CG13830 - chr3R 23070828 3` UTR CG13830 - chr3R_16_23070001 chr3R_23070001 RAL-301_125b 3742 chr3R 23073624 23073629 chr3R 23073759 23073768 4 138 10.5 7.0 8.8 0.4 144 chr3R 23073624 intron CG13830 - chr3R 23073696 intron CG13830 - chr3R 23073768 intron CG13830 - chr3R_4_23070001 chr3R_23070001 RAL-301_125b 3743 chr3R 23073631 23073683 chr3R 23073747 23073812 16 134 5.5 5.0 5.2 2.6 181 chr3R 23073631 intron CG13830 - chr3R 23073722 intron CG13830 - chr3R 23073812 intron CG13830 - chr3R_16_23070001 chr3R_23070001 RAL-301_125b 3744 chr3R 23077035 23077105 chr3R 23077379 23077449 30 344 5.5 8.5 7.0 3.8 414 chr3R 23077035 intron CG13830 - chr3R 23077242 intron CG13830 - chr3R 23077449 intron CG13830 - chr3R_30_23075001 chr3R_23075001 RAL-301_125b 3745 chr3R 23082907 23082974 chr3R 23083156 23083223 29 246 10.5 11.5 11.0 2.4 316 chr3R 23082907 intron CG13830 - chr3R 23083065 intron CG13830 - chr3R 23083223 intron CG13830 - chr3R_29_23080001 chr3R_23080001 RAL-301_125b 3746 chr3R 23101332 23101406 chr3R 23101473 23101503 25 138 7.0 6.5 6.8 3.2 171 chr3R 23101332 intron CG13830 - chr3R 23101418 intron CG13830 - chr3R 23101503 intron CG13830 - chr3R_25_23100001 chr3R_23100001 RAL-301_125b 3747 chr3R 23145112 23145145 chr3R 23145239 23145257 12 126 14.5 7.0 10.8 1.0 145 chr3R 23145112 intergenic not near genes chr3R 23145184 intergenic not near genes chr3R 23145257 intergenic not near genes chr3R_12_23145001 chr3R_23145001 RAL-301_125b 3748 chr3R 23145151 23145193 chr3R 23145237 23145320 16 119 8.0 7.0 7.5 1.9 169 chr3R 23145151 intergenic not near genes chr3R 23145236 intergenic not near genes chr3R 23145320 intergenic not near genes chr3R_16_23145001 chr3R_23145001 RAL-301_125b 3749 chr3R 23211932 23211991 chr3R 23212060 23212119 23 128 5.5 8.0 6.8 2.9 187 chr3R 23211932 intron cnc - chr3R 23212026 intron cnc - chr3R 23212119 intron cnc - chr3R_23_23210001 chr3R_23210001 RAL-301_125b 3750 chr3R 23234800 23234841 chr3R 23234927 23234968 18 127 11.5 9.5 10.5 1.6 168 chr3R 23234800 intron CG4467 - chr3R 23234884 intron CG4467 - chr3R 23234968 intron CG4467 - chr3R_18_23230001 chr3R_23230001 RAL-301_125b 3751 chr3R 23239220 23239280 chr3R 23239357 23239422 29 143 8.0 11.5 9.8 2.7 202 chr3R 23239220 intron CG4467 - chr3R 23239321 intron CG4467 - chr3R 23239422 intron CG4467 - chr3R_29_23235001 chr3R_23235001 RAL-301_125b 3752 chr3R 23245947 23246021 chr3R 23246079 23246122 27 124 7.0 12.0 9.5 2.6 175 chr3R 23245947 intron CG4467 - chr3R 23246034 intron CG4467 - chr3R 23246122 intron CG4467 - chr3R_27_23245001 chr3R_23245001 RAL-301_125b 3753 chr3R 23291227 23291273 chr3R 23291343 23291409 18 131 9.5 11.0 10.2 1.6 182 chr3R 23291227 3` UTR pnt - chr3R 23291318 3` UTR pnt - chr3R 23291409 exon pnt - chr3R_18_23290001 chr3R_23290001 RAL-301_125b 3754 chr3R 23309920 23309958 chr3R 23310050 23310087 6 129 7.0 8.0 7.5 0.7 167 chr3R 23309920 intron pnt - chr3R 23310004 intron pnt - chr3R 23310087 intron pnt - chr3R_6_23310001 chr3R_23310001 RAL-301_125b 3755 chr3R 23341889 23341961 chr3R 23342057 23342059 25 164 9.5 0.0 4.8 4.3 170 chr3R 23341889 intron pnt - chr3R 23341974 intron pnt - chr3R 23342059 intron pnt - chr3R_25_23340001 chr3R_23340001 RAL-301_125b 3756 chr3R 23346800 23346862 chr3R 23346928 23346990 21 128 10.0 7.5 8.8 2.1 190 chr3R 23346800 intergenic not near genes chr3R 23346895 intergenic not near genes chr3R 23346990 intergenic not near genes chr3R_21_23345001 chr3R_23345001 RAL-301_125b 3757 chr3R 23356958 23356977 chr3R 23357094 23357113 18 136 25.5 13.0 19.2 0.9 155 chr3R 23356958 intron Sec13 + chr3R 23357036 intron Sec13 + chr3R 23357113 intron Sec13 + chr3R_18_23355001 chr3R_23355001 RAL-301_125b 3758 chr3R 23389907 23389937 chr3R 23390036 23390066 11 128 20.5 12.5 16.5 0.6 159 chr3R 23389907 intergenic CR43387 + chr3R 23389986 intergenic CR43387 + chr3R 23390066 intergenic CR43387 + chr3R_11_23385001 chr3R_23385001 RAL-301_125b 3759 chr3R 23389938 23389976 chr3R 23390032 23390105 13 121 12.5 14.0 13.2 0.9 167 chr3R 23389938 intergenic CR43387 + chr3R 23390022 intergenic CR43387 + chr3R 23390105 intergenic CR43387 + chr3R_13_23390001 chr3R_23390001 RAL-301_125b 3760 chr3R 23390916 23390955 chr3R 23391048 23391084 6 130 3.5 9.5 6.5 0.8 168 chr3R 23390916 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391084 intergenic not near genes chr3R_6_23390001 chr3R_23390001 RAL-301_125b 3761 chr3R 23413107 23413135 chr3R 23413245 23413272 15 137 9.0 6.5 7.8 1.7 165 chr3R 23413107 intron CG4374 - chr3R 23413190 intron CG4374 - chr3R 23413272 intron CG4374 - chr3R_15_23410001 chr3R_23410001 RAL-301_125b 3762 chr3R 23540735 23540804 chr3R 23540875 23540945 33 135 7.5 4.5 6.0 4.7 210 chr3R 23540735 intergenic not near genes chr3R 23540840 intergenic not near genes chr3R 23540945 intergenic not near genes chr3R_33_23540001 chr3R_23540001 RAL-301_125b 3763 chr3R 23558353 23558418 chr3R 23560184 23560249 Bari1 28 1831 7.5 8.5 8.0 3.1 1896 chr3R 23558353 intron beat-IV + chr3R 23559301 intron beat-IV + chr3R 23560249 intron beat-IV + chr3R_28_23555001 chr3R_23555001 RAL-301_125b 3764 chr3R 23573590 23573657 chr3R 23573723 23573742 15 116 3.0 5.0 4.0 3.0 152 chr3R 23573590 exon beat-IV + chr3R 23573666 exon beat-IV + chr3R 23573742 exon beat-IV + chr3R_15_23570001 chr3R_23570001 RAL-301_125b 3765 chr3R 23589975 23590046 chr3R 23590123 23590194 30 148 15.0 6.5 10.8 2.5 219 chr3R 23589975 intergenic CG10182 -,CG33337 - chr3R 23590084 intergenic CG33337 -,CG10182 - chr3R 23590194 exon CG33337 - chr3R_30_23590001 chr3R_23590001 RAL-301_125b 3766 chr3R 23612106 23612187 chr3R 23612279 23612360 23 168 6.0 5.0 5.5 3.5 254 chr3R 23612106 exon CG31145 - chr3R 23612233 intron CG31145 - chr3R 23612360 intron CG31145 - chr3R_23_23610001 chr3R_23610001 RAL-301_125b 3767 chr3R 10451877 10451877 chr3R 23614719 23614722 5 13162844 40.0 6.5 23.2 0.2 13162845 chr3R 10451877 intergenic not near genes chr3R 17033300 3` UTR CG31268 + chr3R 23614722 intron CG31145 - chr3R_5_17030001 chr3R_17030001 RAL-301_125b 3768 chr3R 23678492 23678572 chr3R 23678858 23678938 97 362 52.0 59.0 55.5 1.7 446 chr3R 23678492 intergenic CG13822 +,CG10157 + chr3R 23678715 intergenic CG10157 +,CG13822 + chr3R 23678938 5` UTR CG10157 + chr3R_97_23675001 chr3R_23675001 RAL-301_125b 3769 chr3R 23677811 23677886 chr3R 23684096 23684171 90 6286 115.5 116.5 116.0 0.8 6360 chr3R 23677811 intron CG13822 + chr3R 23680991 exon eIF-3p66 + chr3R 23684171 intron CG18754 + chr3R_90_23680001 chr3R_23680001 RAL-301_125b 3770 chr3R 23684675 23684721 chr3R 23685184 23685237 roo 15 528 9.0 8.5 8.8 1.5 562 chr3R 23684675 exon CG18754 + chr3R 23684956 intron CG18754 + chr3R 23685237 exon CG18754 + chr3R_15_23680001 chr3R_23680001 RAL-301_125b 3771 chr3R 23697901 23697906 chr3R 23698029 23698049 7 141 13.0 21.0 17.0 0.4 148 chr3R 23697901 intron prt - chr3R 23697975 intron prt - chr3R 23698049 exon prt - chr3R_7_23695001 chr3R_23695001 RAL-301_125b 3772 chr3R 23744682 23744692 chr3R 23744820 23744830 6 137 18.5 11.5 15.0 0.4 148 chr3R 23744682 intron Hmgcr + chr3R 23744756 intron Hmgcr + chr3R 23744830 intron Hmgcr + chr3R_6_23740001 chr3R_23740001 RAL-301_125b 3773 chr3R 23744694 23744748 chr3R 23744817 23744861 21 134 8.5 11.5 10.0 1.9 167 chr3R 23744694 intron Hmgcr + chr3R 23744778 intron Hmgcr + chr3R 23744861 intron Hmgcr + chr3R_21_23740001 chr3R_23740001 RAL-301_125b 3774 chr3R 23801528 23801577 chr3R 23801666 23801692 15 136 10.5 0.5 5.5 2.3 164 chr3R 23801528 3` UTR mbc + chr3R 23801610 3` UTR mbc + chr3R 23801692 intergenic CG33111 -,mbc + chr3R_15_23800001 chr3R_23800001 RAL-301_125b 3775 chr3R 23835366 23835427 chr3R 23844566 23844627 roo 23 9200 11.5 2.0 6.8 2.9 9261 chr3R 23835366 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844627 intron CG34355 + chr3R_23_23835001 chr3R_23835001 RAL-301_125b 3776 chr3R 23851037 23851083 chr3R 23858754 23858800 opus 13 7716 6.5 12.0 9.2 1.3 7763 chr3R 23851037 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858800 intergenic not near genes chr3R_13_23850001 chr3R_23850001 RAL-301_125b 3777 chr3R 23866506 23866577 chr3R 23867895 23867946 32 1384 8.0 8.5 8.2 3.5 1440 chr3R 23866506 intron Pli - chr3R 23867226 intron Pli - chr3R 23867946 intron Pli - chr3R_32_23865001 chr3R_23865001 RAL-301_125b 3778 chr3R 23873932 23873967 chr3R 23874065 23874079 13 123 13.5 23.0 18.2 0.7 147 chr3R 23873932 intron Pli - chr3R 23874006 intron Pli - chr3R 23874079 intron Pli - chr3R_13_23870001 chr3R_23870001 RAL-301_125b 3779 chr3R 23888041 23888108 chr3R 23888177 23888244 31 135 10.0 8.0 9.0 3.1 203 chr3R 23888041 intron Pli - chr3R 23888142 intron Pli - chr3R 23888244 intron Pli - chr3R_31_23885001 chr3R_23885001 RAL-301_125b 3780 chr3R 23937568 23937631 chr3R 23937716 23937779 30 146 7.5 16.0 11.8 2.3 211 chr3R 23937568 exon Gdh - chr3R 23937674 intron Gdh - chr3R 23937779 exon Gdh - chr3R_30_23935001 chr3R_23935001 RAL-301_125b 3781 chr3R 23941210 23941289 chr3R 23941336 23941415 27 125 8.5 11.0 9.8 2.5 205 chr3R 23941210 intron Gdh - chr3R 23941312 intron Gdh - chr3R 23941415 intron Gdh - chr3R_27_23940001 chr3R_23940001 RAL-301_125b 3782 chr3R 23944861 23944936 chr3R 23944996 23945071 35 132 6.0 5.5 5.8 5.1 210 chr3R 23944861 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945071 exon CG12268 - chr3R_35_23940001 chr3R_23940001 RAL-301_125b 3783 chr3R 24011618 24011680 chr3R 24011751 24011813 25 133 10.5 12.0 11.2 2.0 195 chr3R 24011618 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011813 intron KrT95D - chr3R_25_24010001 chr3R_24010001 RAL-301_125b 3784 chr3R 24015364 24015442 chr3R 24015501 24015569 26 133 0.5 11.0 5.8 3.8 205 chr3R 24015364 intron KrT95D - chr3R 24015466 intron KrT95D - chr3R 24015569 intron KrT95D - chr3R_26_24015001 chr3R_24015001 RAL-301_125b 3785 chr3R 24021576 24021655 chr3R 24021716 24021795 32 140 6.0 7.5 6.8 4.1 219 chr3R 24021576 intron KrT95D - chr3R 24021686 intron KrT95D - chr3R 24021795 intron KrT95D - chr3R_32_24020001 chr3R_24020001 RAL-301_125b 3786 chr3R 24066160 24066180 chr3R 24066293 24066326 7 144 12.0 10.0 11.0 0.6 166 chr3R 24066160 intron 4EHP - chr3R 24066243 intron 4EHP - chr3R 24066326 intron 4EHP - chr3R_7_24065001 chr3R_24065001 RAL-301_125b 3787 chr3R 24072083 24072123 chr3R 24072569 24072609 jockey 15 481 5.0 0.5 2.8 3.9 526 chr3R 24072083 intron 4EHP - chr3R 24072346 intron 4EHP - chr3R 24072609 intron 4EHP - chr3R_15_24070001 chr3R_24070001 RAL-301_125b 3788 chr3R 24076876 24076940 chr3R 24078386 24078457 hobo 22 1515 9.5 10.5 10.0 2.0 1581 chr3R 24076876 intron 4EHP - chr3R 24077666 intron 4EHP - chr3R 24078457 intron 4EHP - chr3R_22_24075001 chr3R_24075001 RAL-301_125b 3789 chr3R 24100412 24100482 chr3R 24100557 24100627 26 145 9.0 8.0 8.5 2.7 215 chr3R 24100412 intron 4EHP - chr3R 24100520 intron 4EHP - chr3R 24100627 intron 4EHP - chr3R_26_24100001 chr3R_24100001 RAL-301_125b 3790 chr3R 24199692 24199762 chr3R 24199822 24199892 30 128 7.5 8.0 7.8 3.4 200 chr3R 24199692 intron twin - chr3R 24199792 intron twin - chr3R 24199892 exon twin - chr3R_30_24195001 chr3R_24195001 RAL-301_125b 3791 chr3R 24207175 24207186 chr3R 24212301 24212309 flea 6 5125 17.5 18.5 18.0 0.3 5134 chr3R 24207175 intron twin - chr3R 24209742 intron twin - chr3R 24212309 intron twin - chr3R_6_24205001 chr3R_24205001 RAL-301_125b 3792 chr3R 24207187 24207240 chr3R 24212296 24212367 flea 16 5125 9.0 16.5 12.8 1.2 5180 chr3R 24207187 intron twin - chr3R 24209777 intron twin - chr3R 24212367 intron twin - chr3R_16_24205001 chr3R_24205001 RAL-301_125b 3793 chr3R 24291073 24291110 chr3R 24291213 24291250 10 140 22.5 13.5 18.0 0.5 177 chr3R 24291073 intron CG6364 + chr3R 24291162 intron CG6364 + chr3R 24291250 intron CG6364 + chr3R_10_24290001 chr3R_24290001 RAL-301_125b 3794 chr3R 24291111 24291143 chr3R 24291211 24291263 24 133 15.0 13.5 14.2 1.6 152 chr3R 24291111 exon CG6364 + chr3R 24291187 intron CG6364 + chr3R 24291263 intron CG6364 + chr3R_24_24290001 chr3R_24290001 RAL-301_125b 3795 chr3R 24384007 24384079 chr3R 24384139 24384211 45 132 8.5 11.5 10.0 4.1 204 chr3R 24384007 intron CG17780 - chr3R 24384109 intron CG17780 - chr3R 24384211 exon CG17780 - chr3R_45_24380001 chr3R_24380001 RAL-301_125b 3796 chr3R 21907534 21907536 chr3R 24389465 24389465 6 2481930 37.0 33.5 35.2 0.2 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_6_23145001 chr3R_23145001 RAL-301_125b 3797 chr3R 24433426 24433435 chr3R 24433555 24433563 6 129 0.0 5.5 2.8 1.6 137 chr3R 24433426 intron nAChRalpha1 - chr3R 24433494 intron nAChRalpha1 - chr3R 24433563 intron nAChRalpha1 - chr3R_6_24430001 chr3R_24430001 RAL-301_125b 3798 chr3R 24433440 24433503 chr3R 24433569 24433632 23 129 1.0 9.0 5.0 3.8 192 chr3R 24433440 intron nAChRalpha1 - chr3R 24433536 intron nAChRalpha1 - chr3R 24433632 intron nAChRalpha1 - chr3R_23_24430001 chr3R_24430001 RAL-301_125b 3799 chr3R 24441570 24441649 chr3R 24441902 24441981 24 331 8.0 9.5 8.8 2.4 411 chr3R 24441570 intron nAChRalpha1 - chr3R 24441776 intron nAChRalpha1 - chr3R 24441981 intron nAChRalpha1 - chr3R_24_24440001 chr3R_24440001 RAL-301_125b 3800 chr3R 24493017 24493089 chr3R 24493153 24493225 25 136 8.0 9.0 8.5 2.6 208 chr3R 24493017 intergenic not near genes chr3R 24493121 intergenic not near genes chr3R 24493225 intergenic not near genes chr3R_25_24490001 chr3R_24490001 RAL-301_125b 3801 chr3R 24493253 24493269 chr3R 24493531 24493547 BS 9 278 18.5 17.0 17.8 0.5 294 chr3R 24493253 intergenic not near genes chr3R 24493400 intergenic not near genes chr3R 24493547 intergenic not near genes chr3R_9_24490001 chr3R_24490001 RAL-301_125b 3802 chr3R 24493270 24493304 chr3R 24493528 24493582 BS 14 276 9.5 15.0 12.2 1.1 312 chr3R 24493270 intergenic not near genes chr3R 24493426 intergenic not near genes chr3R 24493582 intergenic not near genes chr3R_14_24490001 chr3R_24490001 RAL-301_125b 3803 chr3R 24496433 24496448 chr3R 24496565 24496575 4 128 18.0 11.5 14.8 0.3 142 chr3R 24496433 intergenic not near genes chr3R 24496504 intergenic not near genes chr3R 24496575 intergenic not near genes chr3R_4_24495001 chr3R_24495001 RAL-301_125b 3804 chr3R 24496449 24496504 chr3R 24496561 24496636 11 123 8.0 11.0 9.5 1.0 187 chr3R 24496449 intergenic not near genes chr3R 24496542 intergenic not near genes chr3R 24496636 intergenic not near genes chr3R_11_24495001 chr3R_24495001 RAL-301_125b 3805 chr3R 24527767 24527819 chr3R 24527908 24527960 27 141 13.0 10.0 11.5 2.2 193 chr3R 24527767 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527960 intergenic CG6607 +,CG13618 + chr3R_27_24525001 chr3R_24525001 RAL-301_125b 3806 chr3R 24594631 24594652 chr3R 24594921 24594942 pogo 19 290 12.5 22.0 17.2 1.0 311 chr3R 24594631 intron mld + chr3R 24594786 intron mld + chr3R 24594942 intron mld + chr3R_19_24590001 chr3R_24590001 RAL-301_125b 3807 chr3R 24594653 24594664 chr3R 24594920 24594952 pogo 6 286 10.5 21.0 15.8 0.4 299 chr3R 24594653 intron mld + chr3R 24594802 intron mld + chr3R 24594952 intron mld + chr3R_6_24590001 chr3R_24590001 RAL-301_125b 3808 chr3R 24624327 24624378 chr3R 24624466 24624517 9 138 3.5 8.0 5.8 1.3 190 chr3R 24624327 intron Syx18 - chr3R 24624422 intron Syx18 - chr3R 24624517 exon Syx18 - chr3R_9_24620001 chr3R_24620001 RAL-301_125b 3809 chr3R 24635601 24635676 chr3R 24635737 24635812 37 134 9.5 11.0 10.2 3.3 211 chr3R 24635601 3` UTR puf - chr3R 24635706 3` UTR puf - chr3R 24635812 3` UTR puf - chr3R_37_24635001 chr3R_24635001 RAL-301_125b 3810 chr3R 24667556 24667592 chr3R 24667683 24667719 24 127 16.5 0.0 8.2 2.6 163 chr3R 24667556 intron slo + chr3R 24667638 intron slo + chr3R 24667719 intron slo + chr3R_24_24665001 chr3R_24665001 RAL-301_125b 3811 chr3R 24670007 24670194 chr3R 24670167 24670329 37 153 0.0 0.0 0.0 37.0 322 chr3R 24670007 intron slo + chr3R 24670168 intron slo + chr3R 24670329 intron slo + chr3R_37_24670001 chr3R_24670001 RAL-301_125b 3812 chr3R 24730051 24730069 chr3R 24732479 24732497 Doc 5 2428 19.0 7.0 13.0 0.4 2446 chr3R 24730051 intron tok + chr3R 24731274 intron tok + chr3R 24732497 intron tok + chr3R_5_24730001 chr3R_24730001 RAL-301_125b 3813 chr3R 24730086 24730120 chr3R 24732466 24732555 Doc 6 2409 6.0 5.5 5.8 0.9 2469 chr3R 24730086 intron tok + chr3R 24731320 intron tok + chr3R 24732555 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-301_125b 3814 chr3R 24772284 24772353 chr3R 24772422 24772460 31 137 8.0 12.5 10.2 2.8 176 chr3R 24772284 intron CG42331 + chr3R 24772372 intron CG42331 + chr3R 24772460 intron CG42331 + chr3R_31_24770001 chr3R_24770001 RAL-301_125b 3815 chr3R 24834586 24834657 chr3R 24834716 24834787 30 130 9.5 7.0 8.2 3.3 201 chr3R 24834586 intron sosie + chr3R 24834686 intron sosie + chr3R 24834787 intron sosie + chr3R_30_24830001 chr3R_24830001 RAL-301_125b 3816 chr3R 24927086 24927148 chr3R 24931927 24931989 Doc 22 4841 9.5 10.5 10.0 2.0 4903 chr3R 24927086 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931989 intergenic CG11771 + chr3R_22_24925001 chr3R_24925001 RAL-301_125b 3817 chr3R 24974865 24974932 chr3R 24974994 24975061 35 127 10.5 15.5 13.0 2.5 196 chr3R 24974865 intergenic not near genes chr3R 24974963 intergenic not near genes chr3R 24975061 intergenic not near genes chr3R_35_24970001 chr3R_24970001 RAL-301_125b 3818 chr3R 25004849 25004922 chr3R 25004982 25005055 15 130 4.5 8.0 6.2 2.1 206 chr3R 25004849 intron tnc + chr3R 25004952 intron tnc + chr3R 25005055 intron tnc + chr3R_15_25000001 chr3R_25000001 RAL-301_125b 3819 chr3R 25027495 25027563 chr3R 25027758 25027826 32 261 12.0 10.0 11.0 2.7 331 chr3R 25027495 intron Hr96 + chr3R 25027660 intron Hr96 + chr3R 25027826 intron Hr96 + chr3R_32_25025001 chr3R_25025001 RAL-301_125b 3820 chr3R 25042746 25042807 chr3R 25042924 25042985 36 177 11.5 17.0 14.2 2.4 239 chr3R 25042746 intron 5PtaseI - chr3R 25042866 intron 5PtaseI - chr3R 25042985 intron 5PtaseI - chr3R_36_25040001 chr3R_25040001 RAL-301_125b 3821 chr3R 25053069 25053161 chr3R 25053218 25053296 38 143 0.0 9.5 4.8 6.6 227 chr3R 25053069 3` UTR CG11791 + chr3R 25053182 intergenic CG11791 +,CG31109 - chr3R 25053296 intergenic CG31109 -,CG11791 + chr3R_38_25050001 chr3R_25050001 RAL-301_125b 3822 chr3R 25126010 25126057 chr3R 25126654 25126689 6 639 44.5 42.5 43.5 0.1 679 chr3R 25126010 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126350 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126689 3` UTR,exon CG42503 -,Mocs2 - chr3R_6_25125001 chr3R_25125001 RAL-301_125b 3823 chr3R 25166315 25166390 chr3R 25166441 25166516 42 126 12.0 8.5 10.2 3.8 201 chr3R 25166315 intergenic not near genes chr3R 25166416 intergenic not near genes chr3R 25166516 intergenic not near genes chr3R_42_25165001 chr3R_25165001 RAL-301_125b 3824 chr3R 25207599 25207628 chr3R 25207742 25207771 13 142 8.5 6.0 7.2 1.6 172 chr3R 25207599 intron,intron Cad96Ca -,CG13654 + chr3R 25207685 intron,intron Cad96Ca -,CG13654 + chr3R 25207771 intron,intron Cad96Ca -,CG13654 + chr3R_13_25205001 chr3R_25205001 RAL-301_125b 3825 chr3R 25296117 25296192 chr3R 25296248 25296323 36 130 5.5 5.5 5.5 5.5 206 chr3R 25296117 intergenic CG31097 - chr3R 25296220 3` UTR CG31097 - chr3R 25296323 3` UTR CG31097 - chr3R_36_25295001 chr3R_25295001 RAL-301_125b 3826 chr3R 25368426 25368504 chr3R 25368594 25368676 23 169 5.5 0.0 2.8 6.1 250 chr3R 25368426 intron Fur1 - chr3R 25368551 intron Fur1 - chr3R 25368676 intron Fur1 - chr3R_23_25365001 chr3R_25365001 RAL-301_125b 3827 chr3R 25464448 25464518 chr3R 25464815 25464885 38 366 9.0 10.0 9.5 3.6 437 chr3R 25464448 intron Fur1 - chr3R 25464666 intron Fur1 - chr3R 25464885 intron Fur1 - chr3R_38_25460001 chr3R_25460001 RAL-301_125b 3828 chr3R 25528002 25528039 chr3R 25528155 25528192 16 152 9.5 8.5 9.0 1.6 190 chr3R 25528002 intron msi + chr3R 25528097 intron msi + chr3R 25528192 intron msi + chr3R_16_25525001 chr3R_25525001 RAL-301_125b 3829 chr3R 25671205 25671270 chr3R 25671346 25671420 28 149 10.5 3.5 7.0 3.5 215 chr3R 25671205 intron Lgr3 + chr3R 25671312 intron Lgr3 + chr3R 25671420 intron Lgr3 + chr3R_28_25670001 chr3R_25670001 RAL-301_125b 3830 chr3R 25689084 25689147 chr3R 25689242 25689305 24 157 13.5 13.0 13.2 1.7 221 chr3R 25689084 intergenic not near genes chr3R 25689194 intergenic not near genes chr3R 25689305 intergenic not near genes chr3R_24_25685001 chr3R_25685001 RAL-301_125b 3831 chr3R 25725789 25725850 chr3R 25734998 25735060 roo 22 9209 6.0 5.5 5.8 3.2 9271 chr3R 25725789 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735060 intron LpR2 - chr3R_22_25730001 chr3R_25730001 RAL-301_125b 3832 chr3R 25832651 25832719 chr3R 25841883 25841911 roo 25 9228 5.0 10.5 7.8 2.8 9260 chr3R 25832651 exon alpha4GT2 + chr3R 25837281 intron alpha4GT2 + chr3R 25841911 exon alpha4GT2 + chr3R_25_25835001 chr3R_25835001 RAL-301_125b 3833 chr3R 25863899 25863928 chr3R 25864037 25864066 8 138 15.5 7.0 11.2 0.7 167 chr3R 25863899 intron CG5890 + chr3R 25863982 intron CG5890 + chr3R 25864066 intron CG5890 + chr3R_8_25860001 chr3R_25860001 RAL-301_125b 3834 chr3R 25863931 25863970 chr3R 25864069 25864108 14 138 7.0 15.0 11.0 1.2 177 chr3R 25863931 intron CG5890 + chr3R 25864020 intron CG5890 + chr3R 25864108 intron CG5890 + chr3R_14_25860001 chr3R_25860001 RAL-301_125b 3835 chr3R 25871057 25871120 chr3R 25871242 25871305 18 185 9.0 6.0 7.5 2.1 248 chr3R 25871057 3` UTR CG5890 + chr3R 25871181 3` UTR CG5890 + chr3R 25871305 3` UTR CG5890 + chr3R_18_25870001 chr3R_25870001 RAL-301_125b 3836 chr3R 25927463 25927533 chr3R 25927595 25927665 34 132 5.5 9.0 7.2 4.1 202 chr3R 25927463 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927665 intron CCAP-R - chr3R_34_25925001 chr3R_25925001 RAL-301_125b 3837 chr3R 25958774 25958849 chr3R 25958912 25958987 30 138 7.5 8.0 7.8 3.4 213 chr3R 25958774 intergenic not near genes chr3R 25958880 intergenic CG14540 + chr3R 25958987 intergenic CG14540 + chr3R_30_25955001 chr3R_25955001 RAL-301_125b 3838 chr3R 25997226 25997267 chr3R 25997363 25997386 8 135 6.0 9.0 7.5 0.9 160 chr3R 25997226 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997306 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997386 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_8_25995001 chr3R_25995001 RAL-301_125b 3839 chr3R 26010125 26010203 chr3R 26010252 26010310 37 126 14.0 9.5 11.8 2.9 185 chr3R 26010125 intergenic not near genes chr3R 26010218 intergenic not near genes chr3R 26010310 intergenic not near genes chr3R_37_26010001 chr3R_26010001 RAL-301_125b 3840 chr3R 26041142 26041182 chr3R 26041295 26041335 22 153 8.5 2.0 5.2 3.5 193 chr3R 26041142 intergenic E(spl)m8-HLH + chr3R 26041238 intergenic E(spl)m8-HLH +,gro + chr3R 26041335 intergenic E(spl)m8-HLH +,gro + chr3R_22_26040001 chr3R_26040001 RAL-301_125b 3841 chr3R 26093795 26093872 chr3R 26093923 26094000 39 126 6.5 5.0 5.8 5.7 205 chr3R 26093795 intron dys - chr3R 26093898 intron dys - chr3R 26094000 intron dys - chr3R_39_26090001 chr3R_26090001 RAL-301_125b 3842 chr3R 26108779 26108813 chr3R 26117412 26117426 Tirant 7 8628 19.0 0.5 9.8 0.6 8647 chr3R 26108779 5` UTR CG31324 + chr3R 26113102 intron CG31324 + chr3R 26117426 intron CG31324 + chr3R_7_26110001 chr3R_26110001 RAL-301_125b 3843 chr3R 26229192 26229255 chr3R 26229307 26229384 20 128 10.0 0.0 5.0 3.3 192 chr3R 26229192 intergenic not near genes chr3R 26229288 intergenic not near genes chr3R 26229384 intergenic not near genes chr3R_20_26225001 chr3R_26225001 RAL-301_125b 3844 chr3R 26272814 26272882 chr3R 26272959 26273027 30 143 7.0 11.0 9.0 3.0 213 chr3R 26272814 intron CG6154 + chr3R 26272920 intron CG6154 + chr3R 26273027 intron CG6154 + chr3R_30_26270001 chr3R_26270001 RAL-301_125b 3845 chr3R 26292065 26292116 chr3R 26292195 26292246 22 130 14.5 7.0 10.8 1.9 181 chr3R 26292065 intergenic not near genes chr3R 26292156 intergenic not near genes chr3R 26292246 intergenic not near genes chr3R_22_26290001 chr3R_26290001 RAL-301_125b 3846 chr3R 26294675 26294748 chr3R 26294803 26294859 24 127 9.0 10.5 9.8 2.2 184 chr3R 26294675 intergenic not near genes chr3R 26294767 intergenic not near genes chr3R 26294859 intergenic not near genes chr3R_24_26290001 chr3R_26290001 RAL-301_125b 3847 chr3R 26307078 26307105 chr3R 26307249 26307255 7 168 12.5 0.0 6.2 1.0 177 chr3R 26307078 intergenic not near genes chr3R 26307166 intergenic not near genes chr3R 26307255 intergenic not near genes chr3R_7_26305001 chr3R_26305001 RAL-301_125b 3848 chr3R 26326644 26326680 chr3R 26326772 26326808 17 128 3.5 15.5 9.5 1.6 164 chr3R 26326644 intron CG33970 + chr3R 26326726 intron CG33970 + chr3R 26326808 intron CG33970 + chr3R_17_26325001 chr3R_26325001 RAL-301_125b 3849 chr3R 26349216 26349247 chr3R 26349362 26349383 12 145 15.5 0.0 7.8 1.4 167 chr3R 26349216 intron CG33970 + chr3R 26349300 intron CG33970 + chr3R 26349383 intron CG33970 + chr3R_12_26345001 chr3R_26345001 RAL-301_125b 3850 chr3R 26376284 26376355 chr3R 26385494 26385579 roo 20 9213 8.5 0.0 4.2 3.8 9295 chr3R 26376284 intergenic not near genes chr3R 26380932 intergenic not near genes chr3R 26385579 intergenic not near genes chr3R_20_26380001 chr3R_26380001 RAL-301_125b 3851 chr3R 26389571 26389637 chr3R 26389704 26389771 12 123 10.0 9.0 9.5 1.1 200 chr3R 26389571 intergenic not near genes chr3R 26389671 intergenic not near genes chr3R 26389771 intergenic not near genes chr3R_12_26385001 chr3R_26385001 RAL-301_125b 3852 chr3R 26510476 26510522 chr3R 26519581 26519627 roo 16 9105 8.0 10.5 9.2 1.6 9151 chr3R 26510476 intron plum - chr3R 26515052 intron plum - chr3R 26519627 intron,5` UTR plum -,CR45226 + chr3R_16_26515001 chr3R_26515001 RAL-301_125b 3853 chr3R 26528586 26528591 chr3R 26528724 26528729 4 138 20.0 16.0 18.0 0.2 143 chr3R 26528586 intron plum - chr3R 26528658 intron plum - chr3R 26528729 intron plum - chr3R_4_26525001 chr3R_26525001 RAL-301_125b 3854 chr3R 26541998 26542074 chr3R 26542135 26542205 37 138 8.5 4.0 6.2 5.1 207 chr3R 26541998 intron scrib + chr3R 26542102 intron scrib + chr3R 26542205 intron scrib + chr3R_37_26540001 chr3R_26540001 RAL-301_125b 3855 chr3R 26558287 26558300 chr3R 26565649 26565662 Stalker4 7 7362 18.0 8.0 13.0 0.5 7375 chr3R 26558287 intron scrib + chr3R 26561974 intron scrib + chr3R 26565662 intron scrib + chr3R_7_26560001 chr3R_26560001 RAL-301_125b 3856 chr3R 26558302 26558361 chr3R 26565646 26565692 Stalker4 20 7353 6.5 8.0 7.2 2.4 7390 chr3R 26558302 intron scrib + chr3R 26561997 intron scrib + chr3R 26565692 intron scrib + chr3R_20_26560001 chr3R_26560001 RAL-301_125b 3857 chr3R 26611296 26611370 chr3R 26611422 26611496 21 123 5.5 9.0 7.2 2.6 200 chr3R 26611296 intergenic not near genes chr3R 26611396 intergenic not near genes chr3R 26611496 intergenic not near genes chr3R_21_26610001 chr3R_26610001 RAL-301_125b 3858 chr3R 26642696 26642753 chr3R 26643140 26643197 jockey 20 444 14.0 10.5 12.2 1.5 501 chr3R 26642696 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643197 intergenic not near genes chr3R_20_26640001 chr3R_26640001 RAL-301_125b 3859 chr3R 26651473 26651549 chr3R 26651607 26651684 35 133 7.0 9.5 8.2 3.8 211 chr3R 26651473 intron beat-VII - chr3R 26651578 intron beat-VII - chr3R 26651684 intron beat-VII - chr3R_35_26650001 chr3R_26650001 RAL-301_125b 3860 chr3R 26740238 26740321 chr3R 26740364 26740447 25 125 8.0 5.0 6.5 3.3 209 chr3R 26740238 intergenic not near genes chr3R 26740342 intergenic not near genes chr3R 26740447 intergenic not near genes chr3R_25_26740001 chr3R_26740001 RAL-301_125b 3861 chr3R 26770196 26770261 chr3R 26770323 26770388 25 127 6.5 9.5 8.0 2.8 192 chr3R 26770196 intergenic CR45563 + chr3R 26770292 intergenic CR45563 + chr3R 26770388 intergenic not near genes chr3R_25_26770001 chr3R_26770001 RAL-301_125b 3862 chr3R 26810504 26810579 chr3R 26811039 26811109 roo 40 534 5.0 11.5 8.2 4.3 605 chr3R 26810504 intron Tl + chr3R 26810806 intron Tl + chr3R 26811109 intron Tl + chr3R_40_26810001 chr3R_26810001 RAL-301_125b 3863 chr3R 26845530 26845547 chr3R 26845660 26845677 11 129 16.5 12.0 14.2 0.7 147 chr3R 26845530 intron Lerp - chr3R 26845604 intron Lerp - chr3R 26845677 intron Lerp - chr3R_11_26845001 chr3R_26845001 RAL-301_125b 3864 chr3R 26845550 26845598 chr3R 26845659 26845715 27 128 10.0 11.5 10.8 2.3 165 chr3R 26845550 intron Lerp - chr3R 26845632 intron Lerp - chr3R 26845715 intron Lerp - chr3R_27_26845001 chr3R_26845001 RAL-301_125b 3865 chr3R 26881161 26881216 chr3R 26881348 26881381 22 179 5.5 19.0 12.2 1.7 220 chr3R 26881161 5` UTR ro - chr3R 26881271 intergenic ro -,T48 + chr3R 26881381 intergenic ro -,T48 + chr3R_22_26880001 chr3R_26880001 RAL-301_125b 3866 chr3R 26907992 26908015 chr3R 26908139 26908162 12 146 21.5 8.0 14.8 0.8 170 chr3R 26907992 intron T48 + chr3R 26908077 intron T48 + chr3R 26908162 intron T48 + chr3R_12_26905001 chr3R_26905001 RAL-301_125b 3867 chr3R 26908018 26908056 chr3R 26908131 26908203 13 143 10.0 5.5 7.8 1.5 185 chr3R 26908018 intron T48 + chr3R 26908110 intron T48 + chr3R 26908203 intron T48 + chr3R_13_26905001 chr3R_26905001 RAL-301_125b 3868 chr3R 26945356 26945434 chr3R 26945486 26945564 21 130 9.0 6.0 7.5 2.5 208 chr3R 26945356 intergenic sda +,CG14252 + chr3R 26945460 intergenic CG14252 +,sda + chr3R 26945564 5` UTR CG14252 + chr3R_21_26945001 chr3R_26945001 RAL-301_125b 3869 chr3R 26960718 26960741 chr3R 26960821 26960859 11 130 7.0 5.5 6.2 1.5 141 chr3R 26960718 intergenic Tsp97E - chr3R 26960788 intergenic Tsp97E - chr3R 26960859 intergenic Tsp97E - chr3R_11_26960001 chr3R_26960001 RAL-301_125b 3870 chr3R 26960744 26960757 chr3R 26960820 26960896 11 124 4.0 5.5 4.8 1.9 152 chr3R 26960744 intergenic Tsp97E - chr3R 26960820 intergenic Tsp97E - chr3R 26960896 intergenic Tsp97E - chr3R_11_26960001 chr3R_26960001 RAL-301_125b 3871 chr3R 27007359 27007426 chr3R 27016544 27016611 roo 24 9184 10.0 9.5 9.8 2.2 9252 chr3R 27007359 intron RYa-R + chr3R 27011985 intron RYa-R + chr3R 27016611 intron RYa-R + chr3R_24_27010001 chr3R_27010001 RAL-301_125b 3872 chr3R 27027632 27027699 chr3R 27027766 27027831 20 133 10.0 0.5 5.2 3.2 199 chr3R 27027632 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027831 intron RYa-R + chr3R_20_27025001 chr3R_27025001 RAL-301_125b 3873 chr3R 27028677 27028738 chr3R 27028806 27028867 25 128 11.0 10.5 10.8 2.1 190 chr3R 27028677 exon RYa-R + chr3R 27028772 intron RYa-R + chr3R 27028867 intron RYa-R + chr3R_25_27025001 chr3R_27025001 RAL-301_125b 3874 chr3R 27028745 27028756 chr3R 27028869 27028885 6 128 7.0 26.0 16.5 0.3 140 chr3R 27028745 intron RYa-R + chr3R 27028815 intron RYa-R + chr3R 27028885 intron RYa-R + chr3R_6_27025001 chr3R_27025001 RAL-301_125b 3875 chr3R 27073619 27073680 chr3R 27073746 27073813 29 130 9.5 8.5 9.0 2.9 194 chr3R 27073619 intergenic not near genes chr3R 27073716 intergenic not near genes chr3R 27073813 intergenic not near genes chr3R_29_27070001 chr3R_27070001 RAL-301_125b 3876 chr3R 27140470 27140539 chr3R 27148130 27148199 412 39 7659 10.0 11.5 10.8 3.3 7729 chr3R 27140470 intron CG6051 - chr3R 27144334 intron CG6051 - chr3R 27148199 intron CG6051 - chr3R_39_27140001 chr3R_27140001 RAL-301_125b 3877 chr3R 27221210 27221257 chr3R 27221350 27221397 20 140 4.0 14.0 9.0 2.0 187 chr3R 27221210 intergenic not near genes chr3R 27221304 intergenic not near genes chr3R 27221397 intergenic not near genes chr3R_20_27220001 chr3R_27220001 RAL-301_125b 3878 chr3R 27225534 27225610 chr3R 27225675 27225751 21 141 9.0 6.0 7.5 2.5 217 chr3R 27225534 intergenic not near genes chr3R 27225642 intergenic not near genes chr3R 27225751 intergenic not near genes chr3R_21_27225001 chr3R_27225001 RAL-301_125b 3879 chr3R 27248082 27248148 chr3R 27248213 27248278 34 131 13.0 11.5 12.2 2.6 196 chr3R 27248082 intergenic CG5984 -,CG5987 - chr3R 27248180 intergenic CG5987 -,CG5984 - chr3R 27248278 3` UTR CG5987 - chr3R_34_27245001 chr3R_27245001 RAL-301_125b 3880 chr3R 27312900 27312973 chr3R 27313026 27313095 9 118 14.5 15.0 14.8 0.6 195 chr3R 27312900 intron CG3339 - chr3R 27312998 intron CG3339 - chr3R 27313095 intron CG3339 - chr3R_9_27310001 chr3R_27310001 RAL-301_125b 3881 chr3R 27315947 27315953 chr3R 27316073 27316079 6 126 21.5 11.0 16.2 0.3 132 chr3R 27315947 intron CG3339 - chr3R 27316013 intron CG3339 - chr3R 27316079 intron CG3339 - chr3R_6_27315001 chr3R_27315001 RAL-301_125b 3882 chr3R 27315955 27316008 chr3R 27316070 27316134 16 124 12.5 10.5 11.5 1.3 179 chr3R 27315955 intron CG3339 - chr3R 27316044 intron CG3339 - chr3R 27316134 exon CG3339 - chr3R_16_27315001 chr3R_27315001 RAL-301_125b 3883 chr3R 27329430 27329495 chr3R 27329557 27329622 32 125 12.5 12.5 12.5 2.4 192 chr3R 27329430 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329622 intergenic CG3330 - chr3R_32_27325001 chr3R_27325001 RAL-301_125b 3884 chr3R 27335910 27335962 chr3R 27336028 27336053 7 123 4.0 0.0 2.0 2.3 143 chr3R 27335910 intergenic not near genes chr3R 27335982 intergenic not near genes chr3R 27336053 intergenic not near genes chr3R_7_27335001 chr3R_27335001 RAL-301_125b 3885 chr3R 27342163 27342222 chr3R 27342326 27342394 19 170 9.5 7.5 8.5 2.0 231 chr3R 27342163 intron CG42534 + chr3R 27342278 intron CG42534 + chr3R 27342394 intron CG42534 + chr3R_19_27340001 chr3R_27340001 RAL-301_125b 3886 chr3R 27342750 27342762 chr3R 27351381 27351393 Tirant 4 8631 16.5 11.0 13.8 0.3 8643 chr3R 27342750 intron CG42534 + chr3R 27347072 intron CG42534 + chr3R 27351393 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-301_125b 3887 chr3R 27342766 27342818 chr3R 27351377 27351448 Tirant 21 8629 5.0 9.5 7.2 2.6 8682 chr3R 27342766 intron CG42534 + chr3R 27347107 intron CG42534 + chr3R 27351448 intron CG42534 + chr3R_21_27345001 chr3R_27345001 RAL-301_125b 3888 chr3R 27356461 27356522 chr3R 27356592 27356632 14 127 1.5 11.0 6.2 1.9 171 chr3R 27356461 intron CG42534 + chr3R 27356546 intron CG42534 + chr3R 27356632 intron CG42534 + chr3R_14_27355001 chr3R_27355001 RAL-301_125b 3889 chr3R 27426127 27426175 chr3R 27426259 27426271 6 125 10.5 19.5 15.0 0.4 144 chr3R 27426127 intron side - chr3R 27426199 intron side - chr3R 27426271 intron side - chr3R_6_27425001 chr3R_27425001 RAL-301_125b 3890 chr3R 27440796 27440832 chr3R 27441935 27441971 10 1139 23.0 31.5 27.2 0.4 1175 chr3R 27440796 intron,3` UTR CG44290 -,CG43447 + chr3R 27441384 intergenic CG44290 - chr3R 27441971 intergenic not near genes chr3R_10_27440001 chr3R_27440001 RAL-301_125b 3891 chr3R 27473720 27473788 chr3R 27474025 27474093 35 303 10.0 9.5 9.8 3.2 373 chr3R 27473720 intergenic not near genes chr3R 27473906 intergenic not near genes chr3R 27474093 intergenic not near genes chr3R_35_27470001 chr3R_27470001 RAL-301_125b 3892 chr3R 27479116 27479183 chr3R 27479276 27479331 29 157 7.5 8.0 7.8 3.3 215 chr3R 27479116 exon Cyp6a18 + chr3R 27479224 exon Cyp6a18 + chr3R 27479331 exon Cyp6a18 + chr3R_29_27475001 chr3R_27475001 RAL-301_125b 3893 chr3R 27499476 27499521 chr3R 27499615 27499615 18 132 6.5 12.5 9.5 1.7 139 chr3R 27499476 intergenic not near genes chr3R 27499546 intergenic not near genes chr3R 27499615 intergenic not near genes chr3R_18_27495001 chr3R_27495001 RAL-301_125b 3894 chr3R 27521116 27521179 chr3R 27530375 27530408 roo 32 9258 9.5 15.0 12.2 2.4 9292 chr3R 27521116 intron CG12885 + chr3R 27525762 intron CG12885 + chr3R 27530408 intron CG12885 + chr3R_32_27525001 chr3R_27525001 RAL-301_125b 3895 chr3R 27538522 27538530 chr3R 27538923 27538931 4 400 17.5 0.5 9.0 0.4 409 chr3R 27538522 5` UTR CR44288 + chr3R 27538726 5` UTR CR44288 + chr3R 27538931 5` UTR CR44288 + chr3R_4_27535001 chr3R_27535001 RAL-301_125b 3896 chr3R 27538533 27538577 chr3R 27538917 27538934 4 386 8.0 0.5 4.2 0.8 401 chr3R 27538533 5` UTR CR44288 + chr3R 27538734 5` UTR CR44288 + chr3R 27538934 5` UTR CR44288 + chr3R_4_27535001 chr3R_27535001 RAL-301_125b 3897 chr3R 27627039 27627050 chr3R 27627191 27627202 7 152 25.0 4.5 14.8 0.4 163 chr3R 27627039 intron Tusp + chr3R 27627120 intron Tusp + chr3R 27627202 intron Tusp + chr3R_7_27625001 chr3R_27625001 RAL-301_125b 3898 chr3R 27627057 27627117 chr3R 27627190 27627260 28 147 8.5 4.5 6.5 3.7 203 chr3R 27627057 intron Tusp + chr3R 27627158 intron Tusp + chr3R 27627260 intron Tusp + chr3R_28_27625001 chr3R_27625001 RAL-301_125b 3899 chr3R 27648548 27648837 chr3R 27648671 27648946 29 121 10.0 0.0 5.0 4.8 398 chr3R 27648548 intron tau - chr3R 27648747 intron tau - chr3R 27648946 intron tau - chr3R_29_27645001 chr3R_27645001 RAL-301_125b 3900 chr3R 27648853 27648869 chr3R 27648980 27648996 11 126 5.0 28.5 16.8 0.6 143 chr3R 27648853 intron tau - chr3R 27648924 intron tau - chr3R 27648996 intron tau - chr3R_11_27645001 chr3R_27645001 RAL-301_125b 3901 chr3R 27706729 27706793 chr3R 27706856 27706920 35 126 17.0 14.5 15.8 2.1 191 chr3R 27706729 5` UTR CG12428 - chr3R 27706824 intergenic CG12428 -,CG12877 + chr3R 27706920 intergenic CG12428 -,CG12877 + chr3R_35_27705001 chr3R_27705001 RAL-301_125b 3902 chr3R 27718530 27718592 chr3R 27718659 27718721 19 129 9.5 3.5 6.5 2.5 191 chr3R 27718530 intergenic not near genes chr3R 27718626 intergenic not near genes chr3R 27718721 intergenic not near genes chr3R_19_27715001 chr3R_27715001 RAL-301_125b 3903 chr3R 27725533 27725584 chr3R 27731025 27731076 I-element 25 5492 8.5 11.0 9.8 2.3 5543 chr3R 27725533 intergenic not near genes chr3R 27728304 intergenic not near genes chr3R 27731076 intergenic not near genes chr3R_25_27725001 chr3R_27725001 RAL-301_125b 3904 chr3R 27779223 27779246 chr3R 27779353 27779376 9 129 1.0 10.5 5.8 1.3 153 chr3R 27779223 exon CG34353 - chr3R 27779300 intron CG34353 - chr3R 27779376 intron CG34353 - chr3R_9_27775001 chr3R_27775001 RAL-301_125b 3905 chr3R 27779249 27779285 chr3R 27779348 27779392 18 120 4.5 8.5 6.5 2.4 143 chr3R 27779249 exon CG34353 - chr3R 27779320 intron CG34353 - chr3R 27779392 intron CG34353 - chr3R_18_27775001 chr3R_27775001 RAL-301_125b 3906 chr3R 27791596 27791609 chr3R 27794794 27794807 Rt1c 4 3198 25.0 16.5 20.8 0.2 3211 chr3R 27791596 intron CG34353 - chr3R 27793202 intron CG34353 - chr3R 27794807 intron CG34353 - chr3R_4_27790001 chr3R_27790001 RAL-301_125b 3907 chr3R 27791617 27791644 chr3R 27794792 27794842 Rt1c 9 3191 19.5 16.5 18.0 0.5 3225 chr3R 27791617 intron CG34353 - chr3R 27793230 intron CG34353 - chr3R 27794842 intron CG34353 - chr3R_9_27790001 chr3R_27790001 RAL-301_125b 3908 chr3R 27799886 27799959 chr3R 27800018 27800091 32 132 7.5 10.5 9.0 3.2 205 chr3R 27799886 intron CG34353 - chr3R 27799988 intron CG34353 - chr3R 27800091 intron CG34353 - chr3R_32_27795001 chr3R_27795001 RAL-301_125b 3909 chr3R 27800526 27800603 chr3R 27803033 27803104 29 2507 66.0 71.0 68.5 0.4 2578 chr3R 27800526 intron CG34353 - chr3R 27801815 intron CG34353 - chr3R 27803104 intron CG34353 - chr3R_29_27800001 chr3R_27800001 RAL-301_125b 3910 chr3R 27812380 27812451 chr3R 27812507 27812578 31 124 6.5 9.0 7.8 3.5 198 chr3R 27812380 intron CG34353 - chr3R 27812479 intron CG34353 - chr3R 27812578 intron CG34353 - chr3R_31_27810001 chr3R_27810001 RAL-301_125b 3911 chr3R 27856720 27856782 chr3R 27858253 27858315 hopper2 22 1531 11.0 13.5 12.2 1.7 1595 chr3R 27856720 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858315 intron CG34353 - chr3R_22_27855001 chr3R_27855001 RAL-301_125b 3912 chr3R 27862920 27862987 chr3R 27868266 27868353 Transpac 21 5357 0.0 0.0 0.0 21.0 5433 chr3R 27862920 intron CG34353 - chr3R 27865636 intron CG34353 - chr3R 27868353 intron CG34353 - chr3R_21_27865001 chr3R_27865001 RAL-301_125b 3913 chr3R 27875660 27875726 chr3R 27882765 27882831 297 30 7105 8.5 15.0 11.8 2.3 7171 chr3R 27875660 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882831 intron CG34353 - chr3R_30_27875001 chr3R_27875001 RAL-301_125b 3914 chr3R 27896293 27896304 chr3R 27896497 27896508 4 203 18.5 9.5 14.0 0.3 215 chr3R 27896293 intron CG34353 - chr3R 27896400 intron CG34353 - chr3R 27896508 intron CG34353 - chr3R_4_27895001 chr3R_27895001 RAL-301_125b 3915 chr3R 27896306 27896370 chr3R 27896494 27896569 29 202 6.5 8.5 7.5 3.4 263 chr3R 27896306 intron CG34353 - chr3R 27896438 intron CG34353 - chr3R 27896569 intron CG34353 - chr3R_29_27895001 chr3R_27895001 RAL-301_125b 3916 chr3R 28002860 28002926 chr3R 28002987 28003053 19 127 4.5 6.5 5.5 2.9 193 chr3R 28002860 intergenic not near genes chr3R 28002956 intergenic not near genes chr3R 28003053 intergenic not near genes chr3R_19_28000001 chr3R_28000001 RAL-301_125b 3917 chr3R 28017908 28017975 chr3R 28018042 28018116 26 139 6.5 7.0 6.8 3.3 208 chr3R 28017908 intergenic not near genes chr3R 28018012 intergenic not near genes chr3R 28018116 intergenic not near genes chr3R_26_28015001 chr3R_28015001 RAL-301_125b 3918 chr3R 28068445 28068519 chr3R 28073937 28074011 I-element 19 5489 0.0 7.5 3.8 4.0 5566 chr3R 28068445 intron CG34362 + chr3R 28071228 intron CG34362 + chr3R 28074011 intron CG34362 + chr3R_19_28070001 chr3R_28070001 RAL-301_125b 3919 chr3R 28091765 28091832 chr3R 28091903 28091970 30 138 5.0 7.5 6.2 4.2 205 chr3R 28091765 intergenic not near genes chr3R 28091868 intergenic not near genes chr3R 28091970 intergenic not near genes chr3R_30_28090001 chr3R_28090001 RAL-301_125b 3920 chr3R 28097633 28097666 chr3R 28097790 28097823 11 157 13.0 6.0 9.5 1.0 190 chr3R 28097633 intergenic not near genes chr3R 28097728 intergenic not near genes chr3R 28097823 intergenic not near genes chr3R_11_28095001 chr3R_28095001 RAL-301_125b 3921 chr3R 28107251 28107267 chr3R 28107379 28107395 6 128 4.0 9.5 6.8 0.8 144 chr3R 28107251 intergenic not near genes chr3R 28107323 intergenic not near genes chr3R 28107395 intergenic not near genes chr3R_6_28105001 chr3R_28105001 RAL-301_125b 3922 chr3R 28173626 28173687 chr3R 28181106 28181167 mdg1 27 7480 9.5 7.0 8.2 2.9 7541 chr3R 28173626 intron CG34354 + chr3R 28177396 intron CG34354 + chr3R 28181167 intron CG34354 + chr3R_27_28175001 chr3R_28175001 RAL-301_125b 3923 chr3R 28201455 28201531 chr3R 28202145 28202221 27 690 9.0 7.0 8.0 3.0 766 chr3R 28201455 intron CG34354 + chr3R 28201838 intron CG34354 + chr3R 28202221 exon CG34354 + chr3R_27_28200001 chr3R_28200001 RAL-301_125b 3924 chr3R 28253324 28253367 chr3R 28255856 28255927 jockey 24 2555 5.5 6.0 5.8 3.5 2603 chr3R 28253324 intergenic not near genes chr3R 28254626 intergenic not near genes chr3R 28255927 intergenic not near genes chr3R_24_28250001 chr3R_28250001 RAL-301_125b 3925 chr3R 28302066 28302122 chr3R 28302555 28302611 jockey 20 489 10.0 10.5 10.2 1.8 545 chr3R 28302066 intergenic not near genes chr3R 28302338 intergenic not near genes chr3R 28302611 intergenic not near genes chr3R_20_28300001 chr3R_28300001 RAL-301_125b 3926 chr3R 28304590 28304657 chr3R 28304727 28304794 26 137 4.0 10.5 7.2 3.2 204 chr3R 28304590 5` UTR CG12516 - chr3R 28304692 intergenic CG12516 - chr3R 28304794 intergenic CG12516 - chr3R_26_28300001 chr3R_28300001 RAL-301_125b 3927 chr3R 28307247 28307268 chr3R 28307497 28307518 9 250 0.0 8.5 4.2 1.7 271 chr3R 28307247 intergenic not near genes chr3R 28307382 intergenic not near genes chr3R 28307518 intergenic not near genes chr3R_9_28305001 chr3R_28305001 RAL-301_125b 3928 chr3R 28307271 28307315 chr3R 28307491 28307566 11 243 0.0 7.0 3.5 2.4 295 chr3R 28307271 intergenic not near genes chr3R 28307418 intergenic not near genes chr3R 28307566 intergenic not near genes chr3R_11_28305001 chr3R_28305001 RAL-301_125b 3929 chr3R 28308025 28308080 chr3R 28308152 28308171 11 114 10.0 9.0 9.5 1.0 146 chr3R 28308025 intergenic not near genes chr3R 28308098 intergenic not near genes chr3R 28308171 intergenic not near genes chr3R_11_28305001 chr3R_28305001 RAL-301_125b 3930 chr3R 28331491 28331529 chr3R 28331620 28331658 23 129 8.0 19.5 13.8 1.6 167 chr3R 28331491 intron larp - chr3R 28331574 intron larp - chr3R 28331658 intron larp - chr3R_23_28330001 chr3R_28330001 RAL-301_125b 3931 chr3R 28352470 28352539 chr3R 28352860 28352906 26 389 7.0 8.5 7.8 3.0 436 chr3R 28352470 exon Or98b + chr3R 28352688 exon Or98b + chr3R 28352906 exon Or98b + chr3R_26_28350001 chr3R_28350001 RAL-301_125b 3932 chr3R 28358810 28358884 chr3R 28359195 28359274 31 384 8.5 7.0 7.8 3.5 464 chr3R 28358810 intergenic not near genes chr3R 28359042 intergenic not near genes chr3R 28359274 intergenic not near genes chr3R_31_28355001 chr3R_28355001 RAL-301_125b 3933 chr3R 28380765 28380825 chr3R 28381034 28381060 18 268 3.0 6.0 4.5 3.3 295 chr3R 28380765 intergenic not near genes chr3R 28380912 intergenic not near genes chr3R 28381060 intergenic not near genes chr3R_18_28380001 chr3R_28380001 RAL-301_125b 3934 chr3R 28382106 28382167 chr3R 28382239 28382300 30 132 7.5 9.5 8.5 3.2 194 chr3R 28382106 intergenic not near genes chr3R 28382203 intergenic not near genes chr3R 28382300 intergenic not near genes chr3R_30_28380001 chr3R_28380001 RAL-301_125b 3935 chr3R 28393655 28393724 chr3R 28393805 28393874 42 150 5.5 14.5 10.0 3.8 219 chr3R 28393655 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393874 intergenic not near genes chr3R_42_28390001 chr3R_28390001 RAL-301_125b 3936 chr3R 28407667 28407706 chr3R 28407802 28407842 18 134 13.0 10.5 11.8 1.4 175 chr3R 28407667 intergenic not near genes chr3R 28407754 intergenic not near genes chr3R 28407842 intergenic not near genes chr3R_18_28405001 chr3R_28405001 RAL-301_125b 3937 chr3R 28407709 28407725 chr3R 28407795 28407857 5 125 10.0 7.0 8.5 0.5 148 chr3R 28407709 intergenic not near genes chr3R 28407783 intergenic not near genes chr3R 28407857 intergenic not near genes chr3R_5_28405001 chr3R_28405001 RAL-301_125b 3938 chr3R 28468906 28468911 chr3R 28469026 28469046 4 130 18.5 11.0 14.8 0.3 140 chr3R 28468906 intron beat-VI + chr3R 28468976 intron beat-VI + chr3R 28469046 intron beat-VI + chr3R_4_28465001 chr3R_28465001 RAL-301_125b 3939 chr3R 28468915 28468954 chr3R 28469018 28469090 19 124 11.0 8.5 9.8 1.8 175 chr3R 28468915 intron beat-VI + chr3R 28469002 intron beat-VI + chr3R 28469090 intron beat-VI + chr3R_19_28465001 chr3R_28465001 RAL-301_125b 3940 chr3R 28478375 28478387 chr3R 28478506 28478518 8 131 21.5 10.0 15.8 0.5 143 chr3R 28478375 intergenic not near genes chr3R 28478446 intergenic not near genes chr3R 28478518 intergenic not near genes chr3R_8_28475001 chr3R_28475001 RAL-301_125b 3941 chr3R 28478390 28478441 chr3R 28478497 28478572 27 128 10.0 10.0 10.0 2.5 182 chr3R 28478390 intergenic not near genes chr3R 28478481 intergenic not near genes chr3R 28478572 intergenic not near genes chr3R_27_28475001 chr3R_28475001 RAL-301_125b 3942 chr3R 28479099 28479167 chr3R 28479232 28479300 30 132 8.0 9.0 8.5 3.2 201 chr3R 28479099 intergenic not near genes chr3R 28479200 intergenic not near genes chr3R 28479300 intergenic not near genes chr3R_30_28475001 chr3R_28475001 RAL-301_125b 3943 chr3R 28480276 28480328 chr3R 28480406 28480459 16 131 6.5 10.0 8.2 1.7 183 chr3R 28480276 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480459 intergenic not near genes chr3R_16_28480001 chr3R_28480001 RAL-301_125b 3944 chr3R 28484352 28484425 chr3R 28486219 28486292 143 1869 132.0 165.0 148.5 1.0 1940 chr3R 28484352 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_143_28485001 chr3R_28485001 RAL-301_125b 3945 chr3R 28637319 28637356 chr3R 28637485 28637533 21 170 16.0 8.0 12.0 1.6 214 chr3R 28637319 exon CG9988 + chr3R 28637426 exon CG9988 + chr3R 28637533 exon CG9988 + chr3R_21_28635001 chr3R_28635001 RAL-301_125b 3946 chr3R 28637357 28637387 chr3R 28637483 28637564 19 169 8.5 7.0 7.8 2.2 207 chr3R 28637357 exon CG9988 + chr3R 28637460 exon CG9988 + chr3R 28637564 exon CG9988 + chr3R_19_28635001 chr3R_28635001 RAL-301_125b 3947 chr3R 28643618 28643686 chr3R 28643758 28643827 32 139 11.5 11.0 11.2 2.6 209 chr3R 28643618 intergenic not near genes chr3R 28643722 intergenic not near genes chr3R 28643827 intergenic not near genes chr3R_32_28640001 chr3R_28640001 RAL-301_125b 3948 chr3R 28670597 28670620 chr3R 28670733 28670756 14 136 10.0 11.5 10.8 1.2 159 chr3R 28670597 intergenic CG9989 +,CG33346 + chr3R 28670676 intergenic CG9989 +,CG33346 + chr3R 28670756 exon CG9989 + chr3R_14_28670001 chr3R_28670001 RAL-301_125b 3949 chr3R 28670624 28670649 chr3R 28670727 28670785 8 132 3.0 11.0 7.0 1.0 161 chr3R 28670624 intergenic CG9989 +,CG33346 + chr3R 28670704 5` UTR CG9989 + chr3R 28670785 intron CG9989 + chr3R_8_28670001 chr3R_28670001 RAL-301_125b 3950 chr3R 28698327 28698394 chr3R 28698744 28698826 24 428 8.0 7.5 7.8 2.7 499 chr3R 28698327 intron htt + chr3R 28698576 intron htt + chr3R 28698826 intron htt + chr3R_24_28695001 chr3R_28695001 RAL-301_125b 3951 chr3R 28702884 28702962 chr3R 28703018 28703096 36 133 6.5 9.5 8.0 4.0 212 chr3R 28702884 intron htt + chr3R 28702990 intron htt + chr3R 28703096 intron htt + chr3R_36_28700001 chr3R_28700001 RAL-301_125b 3952 chr3R 28758243 28758251 chr3R 28763910 28763918 roo 5 5667 22.5 0.0 11.2 0.4 5675 chr3R 28758243 intergenic aqrs - chr3R 28761080 intergenic not near genes chr3R 28763918 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-301_125b 3953 chr3R 28758272 28758318 chr3R 28771329 28771375 Stalker4 25 13057 7.5 9.5 8.5 2.6 13103 chr3R 28758272 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_25_28760001 chr3R_28760001 RAL-301_125b 3954 chr3R 28763900 28763910 chr3R 28771393 28771403 Stalker4 6 7493 0.0 22.5 11.2 0.5 7503 chr3R 28763900 intergenic not near genes chr3R 28767652 intergenic not near genes chr3R 28771403 intergenic not near genes chr3R_6_28765001 chr3R_28765001 RAL-301_125b 3955 chr3R 28792827 28792895 chr3R 28797972 28798040 jockey 22 5136 8.0 5.0 6.5 2.9 5213 chr3R 28792827 intergenic not near genes chr3R 28795434 intergenic not near genes chr3R 28798040 intergenic not near genes chr3R_22_28795001 chr3R_28795001 RAL-301_125b 3956 chr3R 28811530 28811599 chr3R 28811726 28811793 32 196 12.5 6.0 9.2 3.1 263 chr3R 28811530 intergenic wdn - chr3R 28811662 intergenic wdn -,CG1646 + chr3R 28811793 intergenic CG1646 +,wdn - chr3R_32_28810001 chr3R_28810001 RAL-301_125b 3957 chr3R 21907534 21907536 chr3R 28831799 28831801 35 6924266 37.0 41.0 39.0 0.9 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_35_25365001 chr3R_25365001 RAL-301_125b 3958 chr3R 21907534 21907536 chr3R 28831802 28831802 25 6924267 37.0 41.0 39.0 0.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-301_125b 3959 chr3R 29034418 29034493 chr3R 29034551 29034626 32 130 7.0 11.5 9.2 3.1 208 chr3R 29034418 intergenic Cpsf100 +,CR45044 +,beta4GalNAcTB - chr3R 29034522 intergenic Cpsf100 +,CR45044 + chr3R 29034626 5` UTR Cpsf100 + chr3R_32_29030001 chr3R_29030001 RAL-301_125b 3960 chr3R 29079356 29079409 chr3R 29080778 29080831 NOF 17 1422 3.5 11.5 7.5 2.0 1475 chr3R 29079356 intron CG11873 + chr3R 29080094 intron CG11873 + chr3R 29080831 intron CG11873 + chr3R_17_29080001 chr3R_29080001 RAL-301_125b 3961 chr3R 29091380 29091437 chr3R 29091518 29091548 22 133 11.0 13.0 12.0 1.7 168 chr3R 29091380 intron CG11873 + chr3R 29091464 intron CG11873 + chr3R 29091548 intron CG11873 + chr3R_22_29090001 chr3R_29090001 RAL-301_125b 3962 chr3R 29094246 29094283 chr3R 29094372 29094409 19 125 8.5 12.0 10.2 1.7 163 chr3R 29094246 intron CG11873 + chr3R 29094328 intron CG11873 + chr3R 29094409 intron CG11873 + chr3R_19_29090001 chr3R_29090001 RAL-301_125b 3963 chr3R 29141526 29141554 chr3R 29141655 29141683 18 128 0.0 19.0 9.5 1.7 157 chr3R 29141526 intron CG14516 + chr3R 29141604 intron CG14516 + chr3R 29141683 intron CG14516 + chr3R_18_29140001 chr3R_29140001 RAL-301_125b 3964 chr3R 29237211 29237273 chr3R 29239282 29239344 9 2070 39.5 9.0 24.2 0.4 2133 chr3R 29237211 exon CG11951 - chr3R 29238278 intron CG11951 - chr3R 29239344 exon CG31427 - chr3R_9_29235001 chr3R_29235001 RAL-301_125b 3965 chr3R 29239195 29239204 chr3R 29245520 29245529 6 6326 0.5 33.0 16.8 0.3 6334 chr3R 29239195 exon CG31427 - chr3R 29242362 exon CG31445 - chr3R 29245529 exon SP1029 - chr3R_6_29240001 chr3R_29240001 RAL-301_125b 3966 chr3R 29239209 29239248 chr3R 29245518 29245589 12 6326 5.5 32.0 18.8 0.6 6380 chr3R 29239209 exon CG31427 - chr3R 29242399 exon CG31445 - chr3R 29245589 exon SP1029 - chr3R_12_29240001 chr3R_29240001 RAL-301_125b 3967 chr3R 29240423 29240491 chr3R 29240554 29240625 33 134 6.0 3.5 4.8 5.7 202 chr3R 29240423 intergenic CG31427 -,CG31445 - chr3R 29240524 intergenic CG31445 -,CG31427 - chr3R 29240625 3` UTR CG31445 - chr3R_33_29240001 chr3R_29240001 RAL-301_125b 3968 chr3R 29240492 29240502 chr3R 29240626 29240636 6 134 6.0 20.0 13.0 0.4 144 chr3R 29240492 intergenic CG31445 -,CG31427 - chr3R 29240564 intergenic CG31445 -,CG31427 - chr3R 29240636 3` UTR CG31445 - chr3R_6_29240001 chr3R_29240001 RAL-301_125b 3969 chr3R 29249858 29249907 chr3R 29249997 29250046 9 139 0.0 5.5 2.8 2.4 188 chr3R 29249858 intron SP1029 - chr3R 29249952 intron SP1029 - chr3R 29250046 intron SP1029 - chr3R_9_29245001 chr3R_29245001 RAL-301_125b 3970 chr3R 29319772 29319848 chr3R 29320141 29320217 jockey 19 369 7.0 8.0 7.5 2.2 445 chr3R 29319772 intergenic Cnx99A - chr3R 29319994 intergenic Cnx99A - chr3R 29320217 intergenic not near genes chr3R_19_29315001 chr3R_29315001 RAL-301_125b 3971 chr3R 29325477 29325505 chr3R 29325627 29325643 8 142 0.0 0.0 0.0 8.0 166 chr3R 29325477 intergenic not near genes chr3R 29325560 intergenic not near genes chr3R 29325643 intergenic not near genes chr3R_8_29325001 chr3R_29325001 RAL-301_125b 3972 chr3R 29330887 29330895 chr3R 29331013 29331021 6 126 15.5 0.0 7.8 0.7 134 chr3R 29330887 intergenic not near genes chr3R 29330954 intergenic not near genes chr3R 29331021 intergenic not near genes chr3R_6_29330001 chr3R_29330001 RAL-301_125b 3973 chr3R 29365340 29365408 chr3R 29365472 29365540 20 132 7.0 8.5 7.8 2.3 200 chr3R 29365340 intergenic not near genes chr3R 29365440 intergenic not near genes chr3R 29365540 intergenic not near genes chr3R_20_29365001 chr3R_29365001 RAL-301_125b 3974 chr3R 29376310 29376476 chr3R 29376448 29376609 33 137 0.0 0.0 0.0 33.0 299 chr3R 29376310 intergenic not near genes chr3R 29376460 intergenic not near genes chr3R 29376609 intergenic not near genes chr3R_33_29375001 chr3R_29375001 RAL-301_125b 3975 chr3R 29406575 29406643 chr3R 29407911 29407979 jockey 10 1333 7.0 9.5 8.2 1.1 1404 chr3R 29406575 intron Ptp99A + chr3R 29407277 intron Ptp99A + chr3R 29407979 intron Ptp99A + chr3R_10_29405001 chr3R_29405001 RAL-301_125b 3976 chr3R 29412001 29412042 chr3R 29412129 29412171 13 128 2.5 17.5 10.0 1.2 170 chr3R 29412001 intron Ptp99A + chr3R 29412086 intron Ptp99A + chr3R 29412171 intron Ptp99A + chr3R_13_29410001 chr3R_29410001 RAL-301_125b 3977 chr3R 29412931 29412990 chr3R 29413331 29413387 27 394 9.5 9.5 9.5 2.6 456 chr3R 29412931 intron Ptp99A + chr3R 29413159 intron Ptp99A + chr3R 29413387 intron Ptp99A + chr3R_27_29410001 chr3R_29410001 RAL-301_125b 3978 chr3R 29429737 29429805 chr3R 29429865 29429933 24 126 5.0 6.0 5.5 3.7 196 chr3R 29429737 intron Ptp99A + chr3R 29429835 intron Ptp99A + chr3R 29429933 intron Ptp99A + chr3R_24_29425001 chr3R_29425001 RAL-301_125b 3979 chr3R 29433560 29433628 chr3R 29433701 29433769 21 132 8.0 13.0 10.5 1.8 209 chr3R 29433560 intron Ptp99A + chr3R 29433664 intron Ptp99A + chr3R 29433769 intron Ptp99A + chr3R_21_29430001 chr3R_29430001 RAL-301_125b 3980 chr3R 29447773 29447845 chr3R 29447930 29448002 33 154 4.0 12.0 8.0 3.7 229 chr3R 29447773 intron Ptp99A + chr3R 29447888 intron Ptp99A + chr3R 29448002 intron Ptp99A + chr3R_33_29445001 chr3R_29445001 RAL-301_125b 3981 chr3R 29508829 29508841 chr3R 29509014 29509026 7 185 0.0 8.5 4.2 1.3 197 chr3R 29508829 intergenic not near genes chr3R 29508928 intergenic not near genes chr3R 29509026 intergenic not near genes chr3R_7_29505001 chr3R_29505001 RAL-301_125b 3982 chr3R 29510139 29510199 chr3R 29510251 29510298 29 111 2.5 11.0 6.8 3.7 159 chr3R 29510139 intergenic not near genes chr3R 29510218 intergenic not near genes chr3R 29510298 intergenic not near genes chr3R_29_29510001 chr3R_29510001 RAL-301_125b 3983 chr3R 29526192 29526259 chr3R 29526329 29526396 34 137 9.0 4.5 6.8 4.4 204 chr3R 29526192 intergenic not near genes chr3R 29526294 intergenic not near genes chr3R 29526396 intergenic not near genes chr3R_34_29525001 chr3R_29525001 RAL-301_125b 3984 chr3R 29538008 29538158 chr3R 29538137 29538288 10 142 0.0 0.0 0.0 10.0 280 chr3R 29538008 intergenic not near genes chr3R 29538148 intergenic not near genes chr3R 29538288 intergenic not near genes chr3R_10_29535001 chr3R_29535001 RAL-301_125b 3985 chr3R 29565726 29565763 chr3R 29565854 29565871 19 127 11.0 5.5 8.2 2.1 145 chr3R 29565726 intergenic Dr + chr3R 29565798 intergenic not near genes chr3R 29565871 intergenic not near genes chr3R_19_29565001 chr3R_29565001 RAL-301_125b 3986 chr3R 29590329 29590399 chr3R 29590472 29590542 23 139 3.0 7.5 5.2 3.7 213 chr3R 29590329 exon CG31041 - chr3R 29590436 intron CG31041 - chr3R 29590542 exon CG31041 - chr3R_23_29590001 chr3R_29590001 RAL-301_125b 3987 chr3R 29603992 29604042 chr3R 29604121 29604171 21 124 7.5 9.5 8.5 2.2 179 chr3R 29603992 intron alph + chr3R 29604082 intron alph + chr3R 29604171 intron alph + chr3R_21_29600001 chr3R_29600001 RAL-301_125b 3988 chr3R 29604045 29604067 chr3R 29604119 29604196 6 118 5.5 10.5 8.0 0.7 151 chr3R 29604045 intron alph + chr3R 29604120 intron alph + chr3R 29604196 intron alph + chr3R_6_29600001 chr3R_29600001 RAL-301_125b 3989 chr3R 29609124 29609177 chr3R 29609263 29609316 25 138 11.5 4.0 7.8 2.8 192 chr3R 29609124 intron alph + chr3R 29609220 intron alph + chr3R 29609316 intron alph + chr3R_25_29605001 chr3R_29605001 RAL-301_125b 3990 chr3R 29648964 29649012 chr3R 29649104 29649152 23 139 4.5 7.0 5.8 3.4 188 chr3R 29648964 intron Dop1R2 - chr3R 29649058 intron Dop1R2 - chr3R 29649152 intron Dop1R2 - chr3R_23_29645001 chr3R_29645001 RAL-301_125b 3991 chr3R 29708518 29708582 chr3R 29708634 29708710 27 121 6.5 12.5 9.5 2.6 192 chr3R 29708518 intergenic not near genes chr3R 29708614 intergenic not near genes chr3R 29708710 intergenic not near genes chr3R_27_29705001 chr3R_29705001 RAL-301_125b 3992 chr3R 29738216 29738291 chr3R 29739733 29739808 hobo 33 1516 8.0 9.5 8.8 3.4 1592 chr3R 29738216 intergenic CG1969 +,CG7598 + chr3R 29739012 intron CG1969 + chr3R 29739808 5` UTR CG1969 + chr3R_33_29735001 chr3R_29735001 RAL-301_125b 3993 chr3R 29745597 29745623 chr3R 29745724 29745725 6 122 14.5 6.5 10.5 0.5 128 chr3R 29745597 exon IntS11 + chr3R 29745661 exon IntS11 + chr3R 29745725 intron IntS11 + chr3R_6_29745001 chr3R_29745001 RAL-301_125b 3994 chr3R 29745624 29745669 chr3R 29745723 29745785 23 118 7.0 6.5 6.8 2.9 161 chr3R 29745624 exon IntS11 + chr3R 29745704 intron IntS11 + chr3R 29745785 exon IntS11 + chr3R_23_29745001 chr3R_29745001 RAL-301_125b 3995 chr3R 29760316 29760343 chr3R 29761567 29761594 pogo 11 1251 19.5 0.0 9.8 1.0 1278 chr3R 29760316 intergenic not near genes chr3R 29760955 intergenic not near genes chr3R 29761594 intergenic not near genes chr3R_11_29760001 chr3R_29760001 RAL-301_125b 3996 chr3R 29760345 29760382 chr3R 29761566 29761633 pogo 20 1248 13.0 0.0 6.5 2.7 1288 chr3R 29760345 intergenic not near genes chr3R 29760989 intergenic not near genes chr3R 29761633 intergenic not near genes chr3R_20_29760001 chr3R_29760001 RAL-301_125b 3997 chr3R 29854786 29854846 chr3R 29854916 29854970 33 127 14.0 14.5 14.2 2.2 184 chr3R 29854786 3` UTR dgt1 - chr3R 29854878 exon dgt1 - chr3R 29854970 exon dgt1 - chr3R_33_29850001 chr3R_29850001 RAL-301_125b 3998 chr3R 29880970 29881034 chr3R 29881106 29881170 26 136 8.5 8.5 8.5 2.7 200 chr3R 29880970 intron CG31038 + chr3R 29881070 intron CG31038 + chr3R 29881170 intron CG31038 + chr3R_26_29880001 chr3R_29880001 RAL-301_125b 3999 chr3R 29881976 29882044 chr3R 29891183 29891251 roo 33 9206 11.0 12.0 11.5 2.6 9275 chr3R 29881976 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891251 intron CG31038 + chr3R_33_29885001 chr3R_29885001 RAL-301_125b 4000 chr3R 29923614 29923617 chr3R 29925413 29925418 4 1798 33.0 113.0 73.0 0.1 1804 chr3R 29923614 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924516 exon Jon99Cii - chr3R 29925418 exon Jon99Ci - chr3R_4_29920001 chr3R_29920001 RAL-301_125b 4001 chr3R 29923613 29923684 chr3R 29925419 29925481 30 1803 31.0 112.0 71.5 0.4 1868 chr3R 29923613 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924547 exon Jon99Cii - chr3R 29925481 exon Jon99Ci - chr3R_30_29920001 chr3R_29920001 RAL-301_125b 4002 chr3R 29960422 29960488 chr3R 29960666 29960732 39 244 7.0 10.5 8.8 4.0 310 chr3R 29960422 intron TkR99D - chr3R 29960577 intron TkR99D - chr3R 29960732 intron TkR99D - chr3R_39_29960001 chr3R_29960001 RAL-301_125b 4003 chr3R 29963444 29963448 chr3R 29963592 29963596 5 148 11.0 0.0 5.5 0.8 152 chr3R 29963444 intron TkR99D - chr3R 29963520 intron TkR99D - chr3R 29963596 intron TkR99D - chr3R_5_29960001 chr3R_29960001 RAL-301_125b 4004 chr3R 29963450 29963496 chr3R 29963584 29963647 12 150 4.5 0.0 2.2 3.8 197 chr3R 29963450 intron TkR99D - chr3R 29963548 intron TkR99D - chr3R 29963647 intron TkR99D - chr3R_12_29960001 chr3R_29960001 RAL-301_125b 4005 chr3R 29966027 29966071 chr3R 29966141 29966168 11 121 7.0 11.0 9.0 1.1 141 chr3R 29966027 intron TkR99D - chr3R 29966098 intron TkR99D - chr3R 29966168 intron TkR99D - chr3R_11_29965001 chr3R_29965001 RAL-301_125b 4006 chr3R 30032117 30032127 chr3R 30032246 30032256 6 129 20.0 14.0 17.0 0.3 139 chr3R 30032117 intron Axn + chr3R 30032186 intron Axn + chr3R 30032256 intron Axn + chr3R_6_30030001 chr3R_30030001 RAL-301_125b 4007 chr3R 30084810 30084879 chr3R 30086327 30086374 hobo 31 1513 13.5 9.0 11.2 2.5 1564 chr3R 30084810 intron sima + chr3R 30085592 intron sima + chr3R 30086374 intron sima + chr3R_31_30085001 chr3R_30085001 RAL-301_125b 4008 chr3R 30170644 30170678 chr3R 30170770 30170804 12 126 6.0 10.0 8.0 1.3 160 chr3R 30170644 exon CG31028 - chr3R 30170724 intron CG31028 - chr3R 30170804 intron CG31028 - chr3R_12_30170001 chr3R_30170001 RAL-301_125b 4009 chr3R 30175650 30175727 chr3R 30175786 30175852 46 136 8.0 8.5 8.2 5.0 202 chr3R 30175650 intergenic CG1983 - chr3R 30175751 intergenic CG1983 - chr3R 30175852 3` UTR CG1983 - chr3R_46_30175001 chr3R_30175001 RAL-301_125b 4010 chr3R 30203341 30203370 chr3R 30203470 30203499 13 127 11.0 11.5 11.2 1.1 158 chr3R 30203341 intergenic CG9743 - chr3R 30203420 intergenic CG9743 - chr3R 30203499 intergenic not near genes chr3R_13_30200001 chr3R_30200001 RAL-301_125b 4011 chr3R 30210661 30210670 chr3R 30210766 30210800 5 125 0.0 12.5 6.2 0.7 139 chr3R 30210661 intergenic CecA1 +,Anp + chr3R 30210730 intergenic CecA1 +,Anp + chr3R 30210800 intergenic CecA1 +,Anp + chr3R_5_30210001 chr3R_30210001 RAL-301_125b 4012 chr3R 30212614 30212653 chr3R 30212743 30212782 14 129 8.0 1.5 4.8 2.4 168 chr3R 30212614 intergenic CecA2 + chr3R 30212698 intergenic CecA2 + chr3R 30212782 intergenic CecA2 + chr3R_14_30210001 chr3R_30210001 RAL-301_125b 4013 chr3R 30238718 30238761 chr3R 30239932 30239968 1360 17 1214 0.0 0.0 0.0 17.0 1250 chr3R 30238718 intergenic not near genes chr3R 30239343 intergenic not near genes chr3R 30239968 intergenic not near genes chr3R_17_30235001 chr3R_30235001 RAL-301_125b 4014 chr3R 30246296 30246330 chr3R 30246425 30246459 17 129 0.0 17.0 8.5 1.8 163 chr3R 30246296 intron CG9733 - chr3R 30246378 intron CG9733 - chr3R 30246459 intron CG9733 - chr3R_17_30245001 chr3R_30245001 RAL-301_125b 4015 chr3R 30260318 30260384 chr3R 30260444 30260510 29 125 11.5 10.5 11.0 2.4 192 chr3R 30260318 intergenic not near genes chr3R 30260414 intergenic not near genes chr3R 30260510 intergenic not near genes chr3R_29_30260001 chr3R_30260001 RAL-301_125b 4016 chr3R 30267928 30267999 chr3R 30268061 30268134 24 133 7.0 10.5 8.8 2.4 206 chr3R 30267928 intergenic not near genes chr3R 30268031 intergenic not near genes chr3R 30268134 intergenic not near genes chr3R_24_30265001 chr3R_30265001 RAL-301_125b 4017 chr3R 30268368 30268443 chr3R 30268499 30268544 29 128 10.0 11.5 10.8 2.5 176 chr3R 30268368 intergenic not near genes chr3R 30268456 intergenic not near genes chr3R 30268544 intergenic not near genes chr3R_29_30265001 chr3R_30265001 RAL-301_125b 4018 chr3R 30307072 30307145 chr3R 30307204 30307276 28 130 8.0 10.0 9.0 2.8 204 chr3R 30307072 intron hdc + chr3R 30307174 intron hdc + chr3R 30307276 intron hdc + chr3R_28_30305001 chr3R_30305001 RAL-301_125b 4019 chr3R 30315589 30315621 chr3R 30315722 30315723 19 130 20.5 21.0 20.8 0.9 134 chr3R 30315589 intron hdc + chr3R 30315656 intron hdc + chr3R 30315723 intron hdc + chr3R_19_30315001 chr3R_30315001 RAL-301_125b 4020 chr3R 30317286 30317356 chr3R 30324918 30324987 roo 26 7638 3.5 7.0 5.2 4.2 7701 chr3R 30317286 intron hdc + chr3R 30321136 intron hdc + chr3R 30324987 intron hdc + chr3R_26_30320001 chr3R_30320001 RAL-301_125b 4021 chr3R 30331990 30332058 chr3R 30332116 30332187 33 127 8.0 9.0 8.5 3.5 197 chr3R 30331990 intron hdc + chr3R 30332088 intron hdc + chr3R 30332187 intron hdc + chr3R_33_30330001 chr3R_30330001 RAL-301_125b 4022 chr3R 30338358 30338381 chr3R 30338490 30338513 14 132 10.5 9.0 9.8 1.3 155 chr3R 30338358 intron hdc + chr3R 30338436 intron hdc + chr3R 30338513 intron hdc + chr3R_14_30335001 chr3R_30335001 RAL-301_125b 4023 chr3R 30347002 30347010 chr3R 30347135 30347143 8 133 11.5 16.5 14.0 0.5 141 chr3R 30347002 intron hdc + chr3R 30347072 intron hdc + chr3R 30347143 intron hdc + chr3R_8_30345001 chr3R_30345001 RAL-301_125b 4024 chr3R 30347011 30347035 chr3R 30347128 30347168 9 128 9.0 16.0 12.5 0.7 157 chr3R 30347011 intron hdc + chr3R 30347090 intron hdc + chr3R 30347168 intron hdc + chr3R_9_30345001 chr3R_30345001 RAL-301_125b 4025 chr3R 30375498 30375561 chr3R 30383173 30383236 412 30 7675 13.5 8.0 10.8 2.5 7738 chr3R 30375498 intergenic not near genes chr3R 30379367 intergenic not near genes chr3R 30383236 intergenic not near genes chr3R_30_30375001 chr3R_30375001 RAL-301_125b 4026 chr3R 30396178 30396229 chr3R 30404494 30404545 roo 26 8316 14.5 11.5 13.0 1.9 8367 chr3R 30396178 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404545 5` UTR CR45570 + chr3R_26_30400001 chr3R_30400001 RAL-301_125b 4027 chr3R 30422915 30422922 chr3R 30423057 30423070 5 146 16.0 12.5 14.2 0.3 155 chr3R 30422915 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30422992 intergenic CG2217 -,CG42740 -,CG15535 - chr3R 30423070 3` UTR CG15535 - chr3R_5_30420001 chr3R_30420001 RAL-301_125b 4028 chr3R 30422926 30422969 chr3R 30423038 30423116 16 139 8.5 7.0 7.8 1.8 190 chr3R 30422926 5` UTR,5` UTR CG2217 -,CG42740 - chr3R 30423021 intergenic CG15535 -,CG2217 -,CG42740 - chr3R 30423116 3` UTR CG15535 - chr3R_16_30420001 chr3R_30420001 RAL-301_125b 4029 chr3R 30456349 30456418 chr3R 30456479 30456548 31 130 5.0 10.0 7.5 3.6 199 chr3R 30456349 intergenic CG2224 -,aralar1 - chr3R 30456448 3` UTR CG2224 - chr3R 30456548 3` UTR CG2224 - chr3R_31_30455001 chr3R_30455001 RAL-301_125b 4030 chr3R 30457972 30457979 chr3R 30458102 30458109 4 130 0.0 9.5 4.8 0.7 137 chr3R 30457972 intron CG2224 - chr3R 30458040 intron CG2224 - chr3R 30458109 intron CG2224 - chr3R_4_30455001 chr3R_30455001 RAL-301_125b 4031 chr3R 30457982 30458039 chr3R 30458101 30458139 26 128 0.0 9.0 4.5 4.7 157 chr3R 30457982 intron CG2224 - chr3R 30458060 intron CG2224 - chr3R 30458139 intron CG2224 - chr3R_26_30455001 chr3R_30455001 RAL-301_125b 4032 chr3R 30480441 30480487 chr3R 30482952 30483005 jockey 29 2516 10.0 12.0 11.0 2.4 2564 chr3R 30480441 intron PH4alphaEFB + chr3R 30481723 intron PH4alphaEFB + chr3R 30483005 intron PH4alphaEFB + chr3R_29_30480001 chr3R_30480001 RAL-301_125b 4033 chr3R 30548970 30549039 chr3R 30549112 30549181 34 141 10.0 8.5 9.2 3.3 211 chr3R 30548970 intron tmod + chr3R 30549076 intron tmod + chr3R 30549181 intron tmod + chr3R_34_30545001 chr3R_30545001 RAL-301_125b 4034 chr3R 30565994 30566064 chr3R 30566259 30566329 15 265 0.0 9.0 4.5 2.7 335 chr3R 30565994 intron tmod + chr3R 30566162 intron tmod + chr3R 30566329 intron tmod + chr3R_15_30565001 chr3R_30565001 RAL-301_125b 4035 chr3R 30568282 30568355 chr3R 30568441 30568497 28 156 7.5 9.0 8.2 3.0 215 chr3R 30568282 intron tmod + chr3R 30568390 intron tmod + chr3R 30568497 intron tmod + chr3R_28_30565001 chr3R_30565001 RAL-301_125b 4036 chr3R 30571657 30571716 chr3R 30571787 30571846 26 130 8.0 6.5 7.2 3.2 189 chr3R 30571657 intron tmod + chr3R 30571752 intron tmod + chr3R 30571846 exon tmod + chr3R_26_30570001 chr3R_30570001 RAL-301_125b 4037 chr3R 30591266 30591331 chr3R 30591425 30591483 30 157 6.5 6.5 6.5 4.0 217 chr3R 30591266 intergenic not near genes chr3R 30591374 intergenic not near genes chr3R 30591483 intergenic not near genes chr3R_30_30590001 chr3R_30590001 RAL-301_125b 4038 chr3R 30620877 30620949 chr3R 30621082 30621154 18 204 5.5 10.0 7.8 2.0 277 chr3R 30620877 intron CG44954 - chr3R 30621016 intron CG44954 - chr3R 30621154 intron CG44954 - chr3R_18_30620001 chr3R_30620001 RAL-301_125b 4039 chr3R 30627562 30627635 chr3R 30627692 30627734 35 123 9.0 12.5 10.8 3.0 172 chr3R 30627562 3` UTR CG2267 - chr3R 30627648 exon CG2267 - chr3R 30627734 exon CG2267 - chr3R_35_30625001 chr3R_30625001 RAL-301_125b 4040 chr3R 30663513 30663577 chr3R 30663649 30663713 29 136 8.5 11.5 10.0 2.6 200 chr3R 30663513 intergenic not near genes chr3R 30663613 intergenic not near genes chr3R 30663713 intergenic not near genes chr3R_29_30660001 chr3R_30660001 RAL-301_125b 4041 chr3R 30679499 30679551 chr3R 30687018 30687070 blood 25 7518 9.0 10.5 9.8 2.3 7571 chr3R 30679499 intergenic not near genes chr3R 30683284 intergenic not near genes chr3R 30687070 intergenic not near genes chr3R_25_30680001 chr3R_30680001 RAL-301_125b 4042 chr3R 30690113 30690189 chr3R 30690247 30690323 38 133 7.5 4.5 6.0 5.4 210 chr3R 30690113 intergenic not near genes chr3R 30690218 intergenic Spn100A + chr3R 30690323 intergenic Spn100A + chr3R_38_30690001 chr3R_30690001 RAL-301_125b 4043 chr3R 30700831 30700875 chr3R 30701002 30701057 12 174 6.5 0.5 3.5 2.7 226 chr3R 30700831 intergenic not near genes chr3R 30700944 intergenic not near genes chr3R 30701057 intergenic not near genes chr3R_12_30700001 chr3R_30700001 RAL-301_125b 4044 chr3R 30818769 30818835 chr3R 30820384 30820441 1360 32 1615 5.0 7.5 6.2 4.4 1672 chr3R 30818769 intron cindr + chr3R 30819605 intron cindr + chr3R 30820441 intron cindr + chr3R_32_30815001 chr3R_30815001 RAL-301_125b 4045 chr3R 30831666 30831690 chr3R 30831792 30831816 10 126 9.5 15.0 12.2 0.8 150 chr3R 30831666 intron CG15544 + chr3R 30831741 intron CG15544 + chr3R 30831816 intron CG15544 + chr3R_10_30830001 chr3R_30830001 RAL-301_125b 4046 chr3R 30850188 30850268 chr3R 30850332 30850411 14 143 0.0 9.0 4.5 2.5 223 chr3R 30850188 intergenic not near genes chr3R 30850300 intergenic not near genes chr3R 30850411 intergenic not near genes chr3R_14_30850001 chr3R_30850001 RAL-301_125b 4047 chr3R 30855742 30855791 chr3R 30855880 30855929 24 138 7.0 7.5 7.2 2.9 187 chr3R 30855742 intergenic not near genes chr3R 30855836 intergenic not near genes chr3R 30855929 intergenic not near genes chr3R_24_30855001 chr3R_30855001 RAL-301_125b 4048 chr3R 30862379 30862440 chr3R 30862537 30862598 36 157 9.0 6.5 7.8 4.1 219 chr3R 30862379 intergenic not near genes chr3R 30862488 intergenic not near genes chr3R 30862598 intergenic not near genes chr3R_36_30860001 chr3R_30860001 RAL-301_125b 4049 chr3R 30933550 30933555 chr3R 30933694 30933703 6 147 0.0 21.5 10.8 0.5 153 chr3R 30933550 intergenic not near genes chr3R 30933626 intergenic not near genes chr3R 30933703 intergenic not near genes chr3R_6_30930001 chr3R_30930001 RAL-301_125b 4050 chr3R 30980798 30980822 chr3R 30980924 30980948 15 126 8.0 11.5 9.8 1.4 150 chr3R 30980798 intron 5-HT7 - chr3R 30980873 intron 5-HT7 - chr3R 30980948 intron 5-HT7 - chr3R_15_30980001 chr3R_30980001 RAL-301_125b 4051 chr3R 30985637 30985708 chr3R 30985772 30985843 22 134 8.0 8.0 8.0 2.4 206 chr3R 30985637 intron 5-HT7 - chr3R 30985740 intron 5-HT7 - chr3R 30985843 intron 5-HT7 - chr3R_22_30985001 chr3R_30985001 RAL-301_125b 4052 chr3R 30991572 30991592 chr3R 30991706 30991726 8 134 12.5 6.0 9.2 0.8 154 chr3R 30991572 intron 5-HT7 - chr3R 30991649 intron 5-HT7 - chr3R 30991726 intron,3` UTR 5-HT7 -,CG31007 - chr3R_8_30990001 chr3R_30990001 RAL-301_125b 4053 chr3R 30996599 30996663 chr3R 30996873 30996937 31 270 7.5 13.0 10.2 2.8 338 chr3R 30996599 intron 5-HT7 - chr3R 30996768 intron 5-HT7 - chr3R 30996937 intron 5-HT7 - chr3R_31_30995001 chr3R_30995001 RAL-301_125b 4054 chr3R 31026440 31026514 chr3R 31026571 31026645 22 130 3.0 5.0 4.0 4.4 205 chr3R 31026440 intergenic not near genes chr3R 31026542 intergenic not near genes chr3R 31026645 intergenic not near genes chr3R_22_31025001 chr3R_31025001 RAL-301_125b 4055 chr3R 31042064 31042140 chr3R 31042201 31042277 41 136 6.0 10.5 8.2 4.5 213 chr3R 31042064 exon CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042277 exon CanA1 + chr3R_41_31040001 chr3R_31040001 RAL-301_125b 4056 chr3R 31069594 31069675 chr3R 31069739 31069820 38 142 6.5 8.5 7.5 4.5 226 chr3R 31069594 intron Sox100B + chr3R 31069707 intron Sox100B + chr3R 31069820 intron Sox100B + chr3R_38_31065001 chr3R_31065001 RAL-301_125b 4057 chr3R 31074182 31074259 chr3R 31081830 31081914 springer 24 7652 6.5 5.0 5.8 3.5 7732 chr3R 31074182 intron Sox100B + chr3R 31078048 intron Sox100B + chr3R 31081914 exon Sox100B + chr3R_24_31075001 chr3R_31075001 RAL-301_125b 4058 chr3R 31187983 31188050 chr3R 31188127 31188202 33 146 10.5 7.0 8.8 3.4 219 chr3R 31187983 intron mesh - chr3R 31188092 intron mesh - chr3R 31188202 intron mesh - chr3R_33_31185001 chr3R_31185001 RAL-301_125b 4059 chr3R 31245732 31245803 chr3R 31245864 31245928 21 127 5.0 7.0 6.0 3.0 196 chr3R 31245732 intron qless - chr3R 31245830 intron qless - chr3R 31245928 intron qless - chr3R_21_31245001 chr3R_31245001 RAL-301_125b 4060 chr3R 31270849 31270856 chr3R 31270981 31270988 4 132 22.5 0.0 11.2 0.3 139 chr3R 31270849 intergenic not near genes chr3R 31270918 intergenic not near genes chr3R 31270988 intergenic not near genes chr3R_4_31270001 chr3R_31270001 RAL-301_125b 4061 chr3R 31279324 31279397 chr3R 31285565 31285606 diver 23 6236 5.0 4.0 4.5 4.2 6282 chr3R 31279324 intergenic not near genes chr3R 31282465 intergenic not near genes chr3R 31285606 intergenic not near genes chr3R_23_31280001 chr3R_31280001 RAL-301_125b 4062 chr3R 31295311 31295377 chr3R 31295447 31295513 24 132 5.5 4.5 5.0 4.0 202 chr3R 31295311 intergenic not near genes chr3R 31295412 intergenic not near genes chr3R 31295513 intergenic not near genes chr3R_24_31295001 chr3R_31295001 RAL-301_125b 4063 chr3R 31330399 31330409 chr3R 31335651 31335661 copia 6 5252 13.0 13.5 13.2 0.4 5262 chr3R 31330399 intron CG34347 + chr3R 31333030 intron CG34347 + chr3R 31335661 intron CG34347 + chr3R_6_31330001 chr3R_31330001 RAL-301_125b 4064 chr3R 31354797 31354874 chr3R 31354927 31355004 29 130 10.0 5.5 7.8 3.3 207 chr3R 31354797 intron CG34347 + chr3R 31354900 intron CG34347 + chr3R 31355004 intron CG34347 + chr3R_29_31350001 chr3R_31350001 RAL-301_125b 4065 chr3R 31413050 31413088 chr3R 31418300 31418323 copia 13 5245 17.5 0.0 8.8 1.3 5273 chr3R 31413050 intron Gprk2 + chr3R 31415686 intron Gprk2 + chr3R 31418323 intron Gprk2 + chr3R_13_31415001 chr3R_31415001 RAL-301_125b 4066 chr3R 31435314 31435382 chr3R 31435516 31435584 35 202 12.5 9.5 11.0 2.9 270 chr3R 31435314 intron Gprk2 + chr3R 31435449 intron Gprk2 + chr3R 31435584 intron Gprk2 + chr3R_35_31435001 chr3R_31435001 RAL-301_125b 4067 chr3R 31530780 31530844 chr3R 31531147 31531169 28 357 9.0 7.5 8.2 3.0 389 chr3R 31530780 intergenic not near genes chr3R 31530974 intergenic not near genes chr3R 31531169 intergenic not near genes chr3R_28_31530001 chr3R_31530001 RAL-301_125b 4068 chr3R 31539294 31539354 chr3R 31539429 31539489 25 134 6.0 9.0 7.5 2.9 195 chr3R 31539294 intergenic not near genes chr3R 31539392 intergenic not near genes chr3R 31539489 intergenic not near genes chr3R_25_31535001 chr3R_31535001 RAL-301_125b 4069 chr3R 31557951 31558026 chr3R 31558079 31558154 30 126 10.5 9.0 9.8 2.8 203 chr3R 31557951 intron nyo + chr3R 31558052 intron nyo + chr3R 31558154 exon nyo + chr3R_30_31555001 chr3R_31555001 RAL-301_125b 4070 chr3R 31643871 31643900 chr3R 31644019 31644048 11 146 8.0 17.0 12.5 0.8 177 chr3R 31643871 intron kek6 + chr3R 31643960 intron kek6 + chr3R 31644048 intron kek6 + chr3R_11_31640001 chr3R_31640001 RAL-301_125b 4071 chr3R 31645238 31645271 chr3R 31645452 31645455 15 239 3.5 8.5 6.0 2.1 217 chr3R 31645238 intron kek6 + chr3R 31645346 intron kek6 + chr3R 31645455 intron kek6 + chr3R_15_31645001 chr3R_31645001 RAL-301_125b 4072 chr3R 31691490 31691560 chr3R 31696304 31696317 Doc 28 4812 8.5 9.5 9.0 2.8 4827 chr3R 31691490 intergenic not near genes chr3R 31693904 intergenic not near genes chr3R 31696317 intergenic not near genes chr3R_28_31690001 chr3R_31690001 RAL-301_125b 4073 chr3R 31699680 31699683 chr3R 31699812 31699815 4 132 20.0 9.0 14.5 0.3 135 chr3R 31699680 intergenic not near genes chr3R 31699748 intergenic not near genes chr3R 31699815 intergenic not near genes chr3R_4_31695001 chr3R_31695001 RAL-301_125b 4074 chr3R 31699684 31699741 chr3R 31699811 31699873 12 129 12.5 9.0 10.8 1.0 189 chr3R 31699684 intergenic not near genes chr3R 31699778 intergenic not near genes chr3R 31699873 intergenic not near genes chr3R_12_31695001 chr3R_31695001 RAL-301_125b 4075 chr3R 31831489 31831557 chr3R 31831618 31831686 44 129 14.0 6.5 10.2 3.9 197 chr3R 31831489 intron RhoGAP100F + chr3R 31831588 intron RhoGAP100F + chr3R 31831686 intron RhoGAP100F + chr3R_44_31830001 chr3R_31830001 RAL-301_125b 4076 chr3R 31864995 31865063 chr3R 31865123 31865189 18 131 0.0 10.0 5.0 3.0 194 chr3R 31864995 intron heph - chr3R 31865092 intron heph - chr3R 31865189 exon heph - chr3R_18_31865001 chr3R_31865001 RAL-301_125b 4077 chr3R 31924528 31924582 chr3R 31924654 31924661 18 126 10.5 11.0 10.8 1.5 133 chr3R 31924528 intron heph - chr3R 31924594 intron heph - chr3R 31924661 intron heph - chr3R_18_31920001 chr3R_31920001 RAL-301_125b 4078 chr3R 31925653 31925712 chr3R 31925779 31925838 8 120 9.0 12.5 10.8 0.7 185 chr3R 31925653 intron heph - chr3R 31925746 intron heph - chr3R 31925838 intron heph - chr3R_8_31925001 chr3R_31925001 RAL-301_125b 4079 chr3R 31931144 31931215 chr3R 31931277 31931348 34 133 8.0 13.0 10.5 3.0 204 chr3R 31931144 intron heph - chr3R 31931246 intron heph - chr3R 31931348 intron heph - chr3R_34_31930001 chr3R_31930001 RAL-301_125b 4080 chr3R 31966122 31966197 chr3R 31966743 31966818 33 618 5.5 11.5 8.5 3.5 696 chr3R 31966122 intron heph - chr3R 31966470 intron heph - chr3R 31966818 intron heph - chr3R_33_31965001 chr3R_31965001 RAL-301_125b 4081 chr3R 31991060 31991132 chr3R 31991189 31991261 35 129 12.5 7.0 9.8 3.2 201 chr3R 31991060 intron heph - chr3R 31991160 intron heph - chr3R 31991261 intron heph - chr3R_35_31990001 chr3R_31990001 RAL-301_125b 4082 chr3R 31997944 31998016 chr3R 32005464 32005536 blood 30 7520 5.5 7.0 6.2 4.2 7592 chr3R 31997944 intron heph - chr3R 32001740 intron heph - chr3R 32005536 intron heph - chr3R_30_32000001 chr3R_32000001 RAL-301_125b 4083 chr3R 32034213 32034253 chr3R 32034346 32034386 17 132 19.5 8.0 13.8 1.1 173 chr3R 32034213 intergenic not near genes chr3R 32034300 intergenic not near genes chr3R 32034386 intergenic not near genes chr3R_17_32030001 chr3R_32030001 RAL-301_125b 4084 chr3R 32034254 32034285 chr3R 32034344 32034418 18 130 11.0 8.5 9.8 1.7 164 chr3R 32034254 intergenic not near genes chr3R 32034336 intergenic not near genes chr3R 32034418 intergenic not near genes chr3R_18_32030001 chr3R_32030001 RAL-301_125b 4085 chr3R 32061689 32061759 chr3R 32061983 32062053 49 294 74.5 77.0 75.8 0.6 364 chr3R 32061689 intron Map205 - chr3R 32061871 intron Map205 - chr3R 32062053 intron Map205 - chr3R_49_32060001 chr3R_32060001 RAL-301_125b 4086 chr4 76457 76510 chr4 81950 81958 I-element 18 5489 10.0 11.5 10.8 1.5 5501 chr4 76457 intron pan + chr4 79208 intron pan + chr4 81958 intron pan + chr4_18_75001 chr4_75001 RAL-301_125b 4087 chr4 216620 216695 chr4 216753 216828 32 132 7.5 11.0 9.2 3.1 208 chr4 216620 intron CG31999 - chr4 216724 intron CG31999 - chr4 216828 intron CG31999 - chr4_32_215001 chr4_215001 RAL-301_125b 4088 chr4 319951 320017 chr4 328177 328243 Stalker2 26 8226 9.0 8.5 8.8 2.7 8292 chr4 319951 3` UTR CG32850 + chr4 324097 intron CG32850 + chr4 328243 3` UTR,3` UTR CG32850 +,PMCA - chr4_26_320001 chr4_320001 RAL-301_125b 4089 chr4 419462 419542 chr4 419644 419723 17 181 68.5 78.5 73.5 0.2 261 chr4 419462 intergenic not near genes chr4 419592 intergenic not near genes chr4 419723 intergenic not near genes chr4_17_415001 chr4_415001 RAL-301_125b 4090 chr4 488354 488373 chr4 488587 488606 5 233 5.5 19.0 12.2 0.4 252 chr4 488354 intergenic not near genes chr4 488480 intergenic not near genes chr4 488606 intergenic not near genes chr4_5_485001 chr4_485001 RAL-301_125b 4091 chr4 637846 637850 chr4 638008 638010 4 162 29.0 29.5 29.2 0.1 164 chr4 637846 intron CG9935 - chr4 637928 intron CG9935 - chr4 638010 intron CG9935 - chr4_4_635001 chr4_635001 RAL-301_125b 4092 chr4 671568 671582 chr4 680201 680215 Tirant 8 8633 16.5 11.0 13.8 0.5 8647 chr4 671568 intron CG11360 + chr4 675892 intron CG11360 + chr4 680215 intron CG11360 + chr4_8_675001 chr4_675001 RAL-301_125b 4093 chr4 671584 671625 chr4 680198 680258 Tirant 16 8630 6.5 11.0 8.8 1.6 8674 chr4 671584 intron CG11360 + chr4 675921 intron CG11360 + chr4 680258 intron CG11360 + chr4_16_675001 chr4_675001 RAL-301_125b 4094 chr4 694858 694933 chr4 694989 695064 23 130 7.0 3.0 5.0 3.8 206 chr4 694858 intron myo - chr4 694961 intron myo - chr4 695064 intron myo - chr4_23_690001 chr4_690001 RAL-301_125b 4095 chr4 706627 706656 chr4 706810 706851 11 186 43.5 40.0 41.8 0.3 224 chr4 706627 intron ey + chr4 706739 intron ey + chr4 706851 intron ey + chr4_11_705001 chr4_705001 RAL-301_125b 4096 chr4 847049 847112 chr4 847295 847358 17 245 8.0 7.5 7.8 1.9 309 chr4 847049 intergenic not near genes chr4 847204 intergenic not near genes chr4 847358 intergenic not near genes chr4_17_845001 chr4_845001 RAL-301_125b 4097 chr4 959581 959647 chr4 959810 959876 15 229 5.0 6.0 5.5 2.3 295 chr4 959581 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959876 5` UTR CR44030 + chr4_15_955001 chr4_955001 RAL-301_125b 4098 chr4 972455 972517 chr4 972587 972649 23 132 7.0 6.0 6.5 3.1 194 chr4 972455 intron fuss - chr4 972552 intron fuss - chr4 972649 intron fuss - chr4_23_970001 chr4_970001 RAL-301_125b 4099 chr4 1008458 1008468 chr4 1008711 1008721 4 253 13.5 6.0 9.8 0.4 263 chr4 1008458 intergenic not near genes chr4 1008590 intergenic not near genes chr4 1008721 intergenic not near genes chr4_4_1005001 chr4_1005001 RAL-301_125b 4100 chr4 1171907 1171921 chr4 1172222 1172236 8 315 14.0 5.0 9.5 0.8 329 chr4 1171907 intergenic not near genes chr4 1172072 intergenic pho - chr4 1172236 intergenic pho - chr4_8_1170001 chr4_1170001 RAL-301_125b 4101 chrX 136227 136296 chrX 136354 136423 16 127 5.5 9.0 7.2 2.0 196 chrX 136227 intron RhoGAP1A + chrX 136325 intron RhoGAP1A + chrX 136423 intron RhoGAP1A + chrX_16_135001 chrX_135001 RAL-301_125b 4102 chrX 295810 295881 chrX 303480 303551 412 20 7669 5.5 9.0 7.2 2.4 7741 chrX 295810 intron CG3777 + chrX 299680 intron CG3777 + chrX 303551 intron CG3777 + chrX_20_295001 chrX_295001 RAL-301_125b 4103 chrX 318428 318490 chrX 323564 323626 flea 17 5136 10.0 5.5 7.8 1.9 5198 chrX 318428 intron,intron CG3777 +,CG32816 - chrX 321027 intron,intron CG3777 +,CG32816 - chrX 323626 intron,intron CG3777 +,CG32816 - chrX_17_320001 chrX_320001 RAL-301_125b 4104 chrX 428377 428442 chrX 434612 434677 3S18 19 6235 8.5 10.0 9.2 1.9 6300 chrX 428377 intron CG32816 - chrX 431527 intron CG32816 - chrX 434677 intron CG32816 - chrX_19_430001 chrX_430001 RAL-301_125b 4105 chrX 551383 551447 chrX 558994 559059 412 20 7610 5.0 7.5 6.2 2.8 7676 chrX 551383 intron Appl + chrX 555221 intron Appl + chrX 559059 intron Appl + chrX_20_555001 chrX_555001 RAL-301_125b 4106 chrX 713234 713305 chrX 713624 713675 20 386 2.0 2.0 2.0 6.7 441 chrX 713234 intron sdk + chrX 713454 intron sdk + chrX 713675 intron sdk + chrX_20_710001 chrX_710001 RAL-301_125b 4107 chrX 802252 802319 chrX 802379 802379 14 116 6.5 9.5 8.0 1.6 127 chrX 802252 exon CG13359 - chrX 802316 exon CG13359 - chrX 802379 exon CG13359 - chrX_14_800001 chrX_800001 RAL-301_125b 4108 chrX 812219 812290 chrX 817900 817971 297 27 5679 5.5 9.0 7.2 3.3 5752 chrX 812219 intron CG43867 - chrX 815095 intron CG43867 - chrX 817971 intron CG43867 - chrX_27_815001 chrX_815001 RAL-301_125b 4109 chrX 827560 827632 chrX 835402 835474 roo 34 7841 8.5 8.0 8.2 3.7 7914 chrX 827560 intron CG43867 - chrX 831517 intron CG43867 - chrX 835474 intron CG43867 - chrX_34_830001 chrX_830001 RAL-301_125b 4110 chrX 906657 906726 chrX 908496 908565 S-element 27 1837 8.5 9.5 9.0 2.7 1908 chrX 906657 intron CG43867 - chrX 907611 intron CG43867 - chrX 908565 intron CG43867 - chrX_27_905001 chrX_905001 RAL-301_125b 4111 chrX 1033309 1033325 chrX 1040992 1041008 412 6 7683 16.5 11.0 13.8 0.4 7699 chrX 1033309 intron su(w[a]) + chrX 1037158 intron su(w[a]) + chrX 1041008 intron su(w[a]) + chrX_6_1035001 chrX_1035001 RAL-301_125b 4112 chrX 1053120 1053120 chrX 16983076 16983077 10 15929956 34.0 35.0 34.5 0.3 15929957 chrX 1053120 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_10_9015001 chrX_9015001 RAL-301_125b 4113 chrX 1063723 1063745 chrX 1072566 1072588 roo 7 8843 16.0 9.5 12.8 0.5 8865 chrX 1063723 intron CR44779 + chrX 1068156 intron CR44779 + chrX 1072588 intron CR44779 + chrX_7_1065001 chrX_1065001 RAL-301_125b 4114 chrX 1205479 1205552 chrX 1205610 1205683 30 126 11.0 8.0 9.5 2.9 204 chrX 1205479 intergenic CG11381 + chrX 1205581 intergenic CG11381 + chrX 1205683 intergenic CG11381 + chrX_30_1205001 chrX_1205001 RAL-301_125b 4115 chrX 1236900 1236926 chrX 1237053 1237075 12 153 16.5 8.0 12.2 0.9 175 chrX 1236900 3` UTR CG11403 - chrX 1236988 3` UTR CG11403 - chrX 1237075 exon CG11403 - chrX_12_1235001 chrX_1235001 RAL-301_125b 4116 chrX 1253686 1253758 chrX 1253818 1253890 23 128 8.0 5.0 6.5 3.1 204 chrX 1253686 intron Atf3 - chrX 1253788 intron Atf3 - chrX 1253890 intron Atf3 - chrX_23_1250001 chrX_1250001 RAL-301_125b 4117 chrX 1357734 1357796 chrX 1367954 1368016 Doc 21 10218 10.0 12.5 11.2 1.7 10282 chrX 1357734 intergenic png - chrX 1362875 intergenic not near genes chrX 1368016 intergenic not near genes chrX_21_1360001 chrX_1360001 RAL-301_125b 4118 chrX 1428549 1428619 chrX 1428685 1428755 21 136 6.5 9.0 7.8 2.4 206 chrX 1428549 intron futsch + chrX 1428652 intron futsch + chrX 1428755 intron futsch + chrX_21_1425001 chrX_1425001 RAL-301_125b 4119 chrX 1481396 1481415 chrX 1481539 1481558 5 143 24.5 11.0 17.8 0.3 162 chrX 1481396 3` UTR rush + chrX 1481477 intergenic rush +,sta - chrX 1481558 intergenic rush +,sta - chrX_5_1480001 chrX_1480001 RAL-301_125b 4120 chrX 1518018 1518059 chrX 1523444 1523511 jockey 24 5448 7.0 8.5 7.8 2.7 5493 chrX 1518018 intergenic inc + chrX 1520764 intergenic not near genes chrX 1523511 intergenic not near genes chrX_24_1520001 chrX_1520001 RAL-301_125b 4121 chrX 1706807 1706842 chrX 1706933 1706968 17 122 14.5 15.5 15.0 1.1 161 chrX 1706807 intergenic not near genes chrX 1706888 intergenic not near genes chrX 1706968 intergenic not near genes chrX_17_1705001 chrX_1705001 RAL-301_125b 4122 chrX 1930493 1930562 chrX 1938114 1938183 opus 29 7621 10.5 7.0 8.8 3.0 7690 chrX 1930493 3` UTR CG11596 + chrX 1934338 intergenic not near genes chrX 1938183 3` UTR CG3857 - chrX_29_1930001 chrX_1930001 RAL-301_125b 4123 chrX 1954877 1954919 chrX 1962827 1962867 Stalker2 15 7970 2.5 5.0 3.8 3.1 7990 chrX 1954877 intron Hr4 + chrX 1958872 intron Hr4 + chrX 1962867 intron Hr4 + chrX_15_1955001 chrX_1955001 RAL-301_125b 4124 chrX 2146616 2146688 chrX 2146758 2146780 22 138 7.0 11.0 9.0 2.2 164 chrX 2146616 intron Pgd + chrX 2146698 intron Pgd + chrX 2146780 intron Pgd + chrX_22_2145001 chrX_2145001 RAL-301_125b 4125 chrX 2308793 2308818 chrX 2317426 2317451 Tirant 4 8633 8.0 12.5 10.2 0.4 8658 chrX 2308793 intron phl + chrX 2313122 intron phl + chrX 2317451 intron phl + chrX_4_2310001 chrX_2310001 RAL-301_125b 4126 chrX 2385685 2385765 chrX 2385812 2385892 32 126 4.5 10.5 7.5 3.8 207 chrX 2385685 exon PsGEF - chrX 2385788 intron PsGEF - chrX 2385892 intron PsGEF - chrX_32_2385001 chrX_2385001 RAL-301_125b 4127 chrX 2399796 2399871 chrX 2408197 2408262 roo 14 8390 6.5 1.0 3.8 2.9 8466 chrX 2399796 intergenic not near genes chrX 2404029 intergenic not near genes chrX 2408262 intergenic not near genes chrX_14_2400001 chrX_2400001 RAL-301_125b 4128 chrX 2429423 2429487 chrX 2429560 2429624 12 137 5.5 5.0 5.2 1.9 201 chrX 2429423 intergenic gt - chrX 2429524 intergenic not near genes chrX 2429624 intergenic not near genes chrX_12_2425001 chrX_2425001 RAL-301_125b 4129 chrX 2482719 2482739 chrX 2482847 2482867 8 128 12.5 8.0 10.2 0.7 148 chrX 2482719 intron trol - chrX 2482793 intron trol - chrX 2482867 intron trol - chrX_8_2480001 chrX_2480001 RAL-301_125b 4130 chrX 2506468 2506533 chrX 2506599 2506667 15 131 0.0 4.5 2.2 4.7 199 chrX 2506468 intron trol - chrX 2506568 intron trol - chrX 2506667 intron trol - chrX_15_2505001 chrX_2505001 RAL-301_125b 4131 chrX 2552761 2552818 chrX 2552935 2552952 4 164 9.0 3.0 6.0 0.6 191 chrX 2552761 intron Pdfr + chrX 2552856 intron Pdfr + chrX 2552952 intron Pdfr + chrX_4_2550001 chrX_2550001 RAL-301_125b 4132 chrX 2577589 2577597 chrX 2577732 2577733 4 140 14.5 19.5 17.0 0.2 144 chrX 2577589 intron Pdfr + chrX 2577661 exon Pdfr + chrX 2577733 exon Pdfr + chrX_4_2575001 chrX_2575001 RAL-301_125b 4133 chrX 2578775 2578840 chrX 2578929 2578994 31 154 0.5 6.5 3.5 6.9 219 chrX 2578775 intergenic Pdfr +,Vha36-3 - chrX 2578884 intergenic Vha36-3 -,Pdfr + chrX 2578994 intergenic Vha36-3 -,Pdfr + chrX_31_2575001 chrX_2575001 RAL-301_125b 4134 chrX 2610345 2610407 chrX 2617512 2617574 HMS-Beagle 5 7167 6.5 8.5 7.5 0.6 7229 chrX 2610345 intergenic CG8636 - chrX 2613960 intergenic not near genes chrX 2617574 intergenic Tsp3A - chrX_5_2610001 chrX_2610001 RAL-301_125b 4135 chrX 2635324 2635401 chrX 2635483 2635560 20 158 5.0 9.5 7.2 2.4 236 chrX 2635324 intron sgg + chrX 2635442 intron sgg + chrX 2635560 intron sgg + chrX_20_2635001 chrX_2635001 RAL-301_125b 4136 chrX 2656726 2656780 chrX 2656923 2656977 15 197 6.0 7.0 6.5 2.0 251 chrX 2656726 intron sgg + chrX 2656852 intron sgg + chrX 2656977 intron sgg + chrX_15_2655001 chrX_2655001 RAL-301_125b 4137 chrX 2664341 2664407 chrX 2665537 2665603 1360 26 1194 12.5 7.0 9.8 2.4 1262 chrX 2664341 intron sgg + chrX 2664972 intron sgg + chrX 2665603 intron sgg + chrX_26_2660001 chrX_2660001 RAL-301_125b 4138 chrX 2807312 2807381 chrX 2807457 2807526 33 144 9.5 8.0 8.8 3.4 214 chrX 2807312 intron kirre + chrX 2807419 intron kirre + chrX 2807526 intron kirre + chrX_33_2805001 chrX_2805001 RAL-301_125b 4139 chrX 2808882 2808922 chrX 2809012 2809032 15 125 20.0 12.0 16.0 0.9 150 chrX 2808882 intron kirre + chrX 2808957 intron kirre + chrX 2809032 intron kirre + chrX_15_2805001 chrX_2805001 RAL-301_125b 4140 chrX 2814014 2814097 chrX 2814171 2814243 6 153 1.5 0.0 0.8 3.3 229 chrX 2814014 intron kirre + chrX 2814128 intron kirre + chrX 2814243 intron kirre + chrX_6_2810001 chrX_2810001 RAL-301_125b 4141 chrX 2823749 2823779 chrX 2832347 2832376 roo 10 8596 15.0 8.0 11.5 0.8 8627 chrX 2823749 intron kirre + chrX 2828062 intron kirre + chrX 2832376 intron kirre + chrX_10_2825001 chrX_2825001 RAL-301_125b 4142 chrX 2840814 2840876 chrX 2840947 2841009 21 133 8.0 7.5 7.8 2.4 195 chrX 2840814 intron kirre + chrX 2840912 intron kirre + chrX 2841009 intron kirre + chrX_21_2840001 chrX_2840001 RAL-301_125b 4143 chrX 2844859 2844921 chrX 2852319 2852381 mdg1 26 7460 6.5 10.0 8.2 2.8 7522 chrX 2844859 intron kirre + chrX 2848620 intron kirre + chrX 2852381 intron kirre + chrX_26_2845001 chrX_2845001 RAL-301_125b 4144 chrX 2888070 2888140 chrX 2888198 2888258 31 126 7.0 7.5 7.2 3.8 188 chrX 2888070 intron kirre + chrX 2888164 intron kirre + chrX 2888258 intron kirre + chrX_31_2885001 chrX_2885001 RAL-301_125b 4145 chrX 3057979 3058043 chrX 3058270 3058334 pogo 31 291 9.0 8.5 8.8 3.2 355 chrX 3057979 intron kirre + chrX 3058156 intron kirre + chrX 3058334 intron kirre + chrX_31_3055001 chrX_3055001 RAL-301_125b 4146 chrX 3075589 3075658 chrX 3080946 3081014 Transpac 24 5353 5.5 9.5 7.5 2.8 5425 chrX 3075589 intron kirre + chrX 3078302 intron kirre + chrX 3081014 intron kirre + chrX_24_3075001 chrX_3075001 RAL-301_125b 4147 chrX 3120613 3120629 chrX 3120739 3120756 6 127 2.0 2.0 2.0 2.0 143 chrX 3120613 intron kirre + chrX 3120684 intron kirre + chrX 3120756 intron kirre + chrX_6_3120001 chrX_3120001 RAL-301_125b 4148 chrX 3203418 3203434 chrX 3203667 3203669 8 246 16.5 5.0 10.8 0.7 251 chrX 3203418 intron dnc + chrX 3203544 intron dnc + chrX 3203669 intron dnc + chrX_8_3200001 chrX_3200001 RAL-301_125b 4149 chrX 3203436 3203485 chrX 3203663 3203734 19 248 8.0 5.0 6.5 2.5 298 chrX 3203436 intron dnc + chrX 3203585 intron dnc + chrX 3203734 intron dnc + chrX_19_3200001 chrX_3200001 RAL-301_125b 4150 chrX 3206439 3206496 chrX 3206568 3206625 11 129 4.5 11.5 8.0 1.2 186 chrX 3206439 intron dnc + chrX 3206532 intron dnc + chrX 3206625 intron dnc + chrX_11_3205001 chrX_3205001 RAL-301_125b 4151 chrX 3212590 3212612 chrX 3212725 3212747 6 135 4.5 14.0 9.2 0.6 157 chrX 3212590 intron dnc + chrX 3212668 intron dnc + chrX 3212747 intron dnc + chrX_6_3210001 chrX_3210001 RAL-301_125b 4152 chrX 3218498 3218515 chrX 3227697 3227714 roo 5 9199 4.0 8.5 6.2 0.7 9216 chrX 3218498 intron dnc + chrX 3223106 intron dnc + chrX 3227714 intron dnc + chrX_5_3220001 chrX_3220001 RAL-301_125b 4153 chrX 3243611 3243648 chrX 3243751 3243788 8 140 7.5 10.0 8.8 0.8 177 chrX 3243611 intron dnc + chrX 3243700 intron dnc + chrX 3243788 intron dnc + chrX_8_3240001 chrX_3240001 RAL-301_125b 4154 chrX 3293154 3293223 chrX 3293362 3293439 17 211 4.5 5.0 4.8 2.9 285 chrX 3293154 intron dnc + chrX 3293296 intron dnc + chrX 3293439 intron dnc + chrX_17_3290001 chrX_3290001 RAL-301_125b 4155 chrX 3331181 3331221 chrX 3331316 3331356 12 135 14.5 0.0 7.2 1.5 175 chrX 3331181 intron,intron dnc +,CR44886 - chrX 3331268 intron,intron dnc +,CR44886 - chrX 3331356 intron,intron dnc +,CR44886 - chrX_12_3330001 chrX_3330001 RAL-301_125b 4156 chrX 3351754 3351808 chrX 3351890 3351944 18 123 9.0 9.0 9.0 1.8 190 chrX 3351754 intergenic not near genes chrX 3351849 intergenic not near genes chrX 3351944 intergenic not near genes chrX_18_3350001 chrX_3350001 RAL-301_125b 4157 chrX 3398329 3398377 chrX 3398457 3398505 23 128 8.0 9.5 8.8 2.3 176 chrX 3398329 intron,intron CR44999 +,CG12535 - chrX 3398417 intron,intron CR44999 +,CG12535 - chrX 3398505 intron,intron CR44999 +,CG12535 - chrX_23_3395001 chrX_3395001 RAL-301_125b 4158 chrX 3414293 3414352 chrX 3414470 3414529 20 177 5.0 0.5 2.8 5.3 236 chrX 3414293 intron,intron CR44999 +,CG12535 - chrX 3414411 intron,intron CR44999 +,CG12535 - chrX 3414529 intron,intron CR44999 +,CG12535 - chrX_20_3410001 chrX_3410001 RAL-301_125b 4159 chrX 3414976 3414981 chrX 3421211 3421216 3S18 5 6235 18.0 5.0 11.5 0.4 6240 chrX 3414976 intron,intron CR44999 +,CG12535 - chrX 3418096 intron,intron CR44999 +,CG12535 - chrX 3421216 intron,intron CR44999 +,CG12535 - chrX_5_3415001 chrX_3415001 RAL-301_125b 4160 chrX 3414984 3415043 chrX 3421209 3421278 3S18 18 6233 5.5 4.0 4.8 3.1 6294 chrX 3414984 intron,intron CR44999 +,CG12535 - chrX 3418131 intron,intron CR44999 +,CG12535 - chrX 3421278 intron,intron CR44999 +,CG12535 - chrX_18_3415001 chrX_3415001 RAL-301_125b 4161 chrX 3455541 3455558 chrX 3455665 3455692 8 133 6.0 10.5 8.2 0.9 151 chrX 3455541 intron CR44999 + chrX 3455616 intron CR44999 + chrX 3455692 intron CR44999 + chrX_8_3455001 chrX_3455001 RAL-301_125b 4162 chrX 3465758 3465770 chrX 3465892 3465903 6 134 9.5 5.0 7.2 0.7 145 chrX 3465758 intron,3` UTR CR44999 +,CG12206 - chrX 3465830 intron,3` UTR CR44999 +,CG12206 - chrX 3465903 intron,3` UTR CR44999 +,CG12206 - chrX_6_3465001 chrX_3465001 RAL-301_125b 4163 chrX 3493046 3493121 chrX 3502255 3502327 roo 25 9208 4.0 4.0 4.0 5.0 9281 chrX 3493046 intron,exon CR44999 +,Gas8 - chrX 3497686 intron,intron CR44999 +,Gas8 - chrX 3502327 intron,intron CR44999 +,Gas8 - chrX_25_3495001 chrX_3495001 RAL-301_125b 4164 chrX 3513715 3513783 chrX 3513848 3513916 24 132 7.0 5.0 6.0 3.4 201 chrX 3513715 intron,intron CR44999 +,CG32791 - chrX 3513816 intron,intron CR44999 +,CG32791 - chrX 3513916 intron,intron CR44999 +,CG32791 - chrX_24_3510001 chrX_3510001 RAL-301_125b 4165 chrX 3597510 3597571 chrX 3619723 3619789 roo 24 22218 11.5 9.0 10.2 2.1 22279 chrX 3597510 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619789 intron AstA-R1 + chrX_24_3605001 chrX_3605001 RAL-301_125b 4166 chrX 3646405 3646424 chrX 3646543 3646562 6 138 8.0 14.0 11.0 0.5 157 chrX 3646405 intron AstA-R1 + chrX 3646484 intron AstA-R1 + chrX 3646562 intron AstA-R1 + chrX_6_3645001 chrX_3645001 RAL-301_125b 4167 chrX 3712348 3712408 chrX 3712681 3712741 19 333 5.0 6.0 5.5 2.9 393 chrX 3712348 intron Rala - chrX 3712544 intron Rala - chrX 3712741 intron Rala - chrX_19_3710001 chrX_3710001 RAL-301_125b 4168 chrX 3726726 3726792 chrX 3730173 3730191 NOF 24 3444 2.5 8.5 5.5 3.7 3465 chrX 3726726 intron tlk + chrX 3728458 intron tlk + chrX 3730191 intron tlk + chrX_24_3725001 chrX_3725001 RAL-301_125b 4169 chrX 3751751 3751754 chrX 3751883 3751889 6 134 3.0 22.0 12.5 0.4 138 chrX 3751751 intron tlk + chrX 3751820 intron tlk + chrX 3751889 intron tlk + chrX_6_3750001 chrX_3750001 RAL-301_125b 4170 chrX 3842301 3842353 chrX 3842569 3842621 pogo 10 268 2.5 5.0 3.8 2.1 320 chrX 3842301 intron ec + chrX 3842461 intron ec + chrX 3842621 intron ec + chrX_10_3840001 chrX_3840001 RAL-301_125b 4171 chrX 3880463 3880486 chrX 3880599 3880622 7 136 0.5 14.5 7.5 0.8 159 chrX 3880463 intergenic VhaAC39-1 + chrX 3880542 intergenic VhaAC39-1 + chrX 3880622 intergenic VhaAC39-1 + chrX_7_3880001 chrX_3880001 RAL-301_125b 4172 chrX 3881224 3881286 chrX 3881413 3881475 22 188 12.0 6.0 9.0 2.2 251 chrX 3881224 intron VhaAC39-1 + chrX 3881350 intron VhaAC39-1 + chrX 3881475 exon VhaAC39-1 + chrX_22_3880001 chrX_3880001 RAL-301_125b 4173 chrX 3986831 3986887 chrX 3994514 3994570 412 20 7682 5.5 9.5 7.5 2.4 7739 chrX 3986831 intergenic not near genes chrX 3990700 intergenic not near genes chrX 3994570 intergenic not near genes chrX_20_3990001 chrX_3990001 RAL-301_125b 4174 chrX 4101820 4101836 chrX 4101949 4101965 5 128 17.0 9.0 13.0 0.4 145 chrX 4101820 exon CG15375 + chrX 4101892 exon CG15375 + chrX 4101965 exon CG15375 + chrX_5_4100001 chrX_4100001 RAL-301_125b 4175 chrX 4101838 4101864 chrX 4101946 4101993 14 127 10.0 8.0 9.0 1.4 155 chrX 4101838 exon CG15375 + chrX 4101916 exon CG15375 + chrX 4101993 exon CG15375 + chrX_14_4100001 chrX_4100001 RAL-301_125b 4176 chrX 4152340 4152378 chrX 4152467 4152505 14 124 12.0 11.5 11.8 1.1 165 chrX 4152340 intron Fas2 - chrX 4152422 intron Fas2 - chrX 4152505 intron Fas2 - chrX_14_4150001 chrX_4150001 RAL-301_125b 4177 chrX 4157854 4157920 chrX 4164950 4165022 297 24 7102 4.5 7.5 6.0 3.4 7168 chrX 4157854 intron Fas2 - chrX 4161438 intron Fas2 - chrX 4165022 intron Fas2 - chrX_24_4160001 chrX_4160001 RAL-301_125b 4178 chrX 4186821 4186821 chrX 9312363 9312364 6 5125542 42.5 26.0 34.2 0.2 5125543 chrX 4186821 intron Fas2 - chrX 6749592 intron CG14439 + chrX 9312364 intergenic not near genes chrX_6_6745001 chrX_6745001 RAL-301_125b 4179 chrX 4209884 4209929 chrX 4210024 4210069 12 140 0.5 8.0 4.2 2.3 185 chrX 4209884 intergenic not near genes chrX 4209976 intergenic not near genes chrX 4210069 intergenic not near genes chrX_12_4205001 chrX_4205001 RAL-301_125b 4180 chrX 4216291 4216332 chrX 4216419 4216461 17 129 10.5 10.0 10.2 1.5 170 chrX 4216291 intergenic not near genes chrX 4216376 intergenic CG15571 - chrX 4216461 intergenic CG15571 - chrX_17_4215001 chrX_4215001 RAL-301_125b 4181 chrX 4252902 4252976 chrX 4253039 4253114 37 136 9.0 5.0 7.0 4.6 212 chrX 4252902 intergenic CG15576 - chrX 4253008 intergenic CG15576 - chrX 4253114 intergenic CG15576 - chrX_37_4250001 chrX_4250001 RAL-301_125b 4182 chrX 4343829 4343894 chrX 4343997 4344058 20 167 2.0 5.5 3.8 4.2 229 chrX 4343829 intron norpA + chrX 4343944 intron norpA + chrX 4344058 intron norpA + chrX_20_4340001 chrX_4340001 RAL-301_125b 4183 chrX 4388255 4388276 chrX 4388438 4388459 8 183 5.0 10.0 7.5 0.9 204 chrX 4388255 intron CR32773 - chrX 4388357 intron CR32773 - chrX 4388459 intron CR32773 - chrX_8_4385001 chrX_4385001 RAL-301_125b 4184 chrX 4389377 4389380 chrX 12946233 12946235 6 8556855 2.0 24.5 13.2 0.4 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_6_8665001 chrX_8665001 RAL-301_125b 4185 chrX 4411425 4411468 chrX 4411555 4411593 16 129 10.0 6.0 8.0 1.8 168 chrX 4411425 intron CR32773 - chrX 4411509 intron CR32773 - chrX 4411593 intron CR32773 - chrX_16_4410001 chrX_4410001 RAL-301_125b 4186 chrX 4436461 4436495 chrX 4436594 4436628 7 133 7.5 15.0 11.2 0.6 167 chrX 4436461 intron,intron CR32773 -,bi + chrX 4436544 intron,intron CR32773 -,bi + chrX 4436628 intron,intron CR32773 -,bi + chrX_7_4435001 chrX_4435001 RAL-301_125b 4187 chrX 4515784 4515858 chrX 4515912 4515986 20 126 5.5 2.5 4.0 4.0 202 chrX 4515784 intron CR32773 - chrX 4515885 intron CR32773 - chrX 4515986 intron CR32773 - chrX_20_4515001 chrX_4515001 RAL-301_125b 4188 chrX 4525704 4525769 chrX 4525846 4525911 14 142 4.5 3.0 3.8 2.9 207 chrX 4525704 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525911 intron CR32773 - chrX_14_4525001 chrX_4525001 RAL-301_125b 4189 chrX 4535409 4535477 chrX 4535536 4535604 27 127 6.5 6.5 6.5 3.6 195 chrX 4535409 intron,3` UTR CR32773 -,CG3556 + chrX 4535506 intron CR32773 - chrX 4535604 intron CR32773 - chrX_27_4535001 chrX_4535001 RAL-301_125b 4190 chrX 4557790 4557825 chrX 4557917 4557952 15 124 14.0 1.0 7.5 1.8 162 chrX 4557790 intron CR32773 - chrX 4557871 intron CR32773 - chrX 4557952 intron CR32773 - chrX_15_4555001 chrX_4555001 RAL-301_125b 4191 chrX 4557826 4557841 chrX 4557913 4557948 5 107 11.0 3.0 7.0 0.6 122 chrX 4557826 intron CR32773 - chrX 4557887 intron CR32773 - chrX 4557948 intron CR32773 - chrX_5_4555001 chrX_4555001 RAL-301_125b 4192 chrX 4617441 4617441 chrX 18826339 18826342 4 14208900 22.5 34.0 28.2 0.1 14208901 chrX 4617441 intergenic peb + chrX 11721892 exon Tango10 + chrX 18826342 intron CG42450 + chrX_4_11720001 chrX_11720001 RAL-301_125b 4193 chrX 4638599 4638658 chrX 4638779 4638845 27 184 3.5 5.5 4.5 4.9 246 chrX 4638599 exon pon + chrX 4638722 3` UTR pon + chrX 4638845 3` UTR pon + chrX_27_4635001 chrX_4635001 RAL-301_125b 4194 chrX 4700348 4700420 chrX 4700741 4700813 jockey 34 392 7.0 11.0 9.0 3.4 465 chrX 4700348 3` UTR ctp + chrX 4700580 3` UTR ctp + chrX 4700813 3` UTR ctp + chrX_34_4700001 chrX_4700001 RAL-301_125b 4195 chrX 4723523 4723579 chrX 4723653 4723709 15 130 10.0 16.0 13.0 1.1 186 chrX 4723523 exon Proc-R + chrX 4723616 intron Proc-R + chrX 4723709 intron Proc-R + chrX_15_4720001 chrX_4720001 RAL-301_125b 4196 chrX 4755355 4755370 chrX 4755482 4755497 5 127 7.0 0.5 3.8 1.0 142 chrX 4755355 intergenic not near genes chrX 4755426 intergenic not near genes chrX 4755497 intergenic not near genes chrX_5_4755001 chrX_4755001 RAL-301_125b 4197 chrX 4755379 4755435 chrX 4755504 4755562 7 126 2.0 0.5 1.2 3.2 183 chrX 4755379 intergenic not near genes chrX 4755470 intergenic not near genes chrX 4755562 intergenic not near genes chrX_7_4755001 chrX_4755001 RAL-301_125b 4198 chrX 4763207 4763272 chrX 4763745 4763810 Stalker4 20 538 6.5 7.0 6.8 2.6 603 chrX 4763207 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763810 intergenic not near genes chrX_20_4760001 chrX_4760001 RAL-301_125b 4199 chrX 4787028 4787087 chrX 4787174 4787234 8 148 6.0 1.0 3.5 1.8 206 chrX 4787028 intergenic not near genes chrX 4787131 intergenic not near genes chrX 4787234 intergenic not near genes chrX_8_4785001 chrX_4785001 RAL-301_125b 4200 chrX 4788200 4788249 chrX 4788326 4788375 16 125 9.0 10.0 9.5 1.5 175 chrX 4788200 intergenic not near genes chrX 4788288 intergenic not near genes chrX 4788375 intergenic not near genes chrX_16_4785001 chrX_4785001 RAL-301_125b 4201 chrX 4792340 4792394 chrX 4792822 4792877 jockey 13 482 7.5 9.5 8.5 1.4 537 chrX 4792340 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792877 intergenic not near genes chrX_13_4790001 chrX_4790001 RAL-301_125b 4202 chrX 4814451 4814522 chrX 4814581 4814608 25 126 9.0 5.0 7.0 3.1 157 chrX 4814451 intergenic not near genes chrX 4814530 intergenic not near genes chrX 4814608 intergenic not near genes chrX_25_4810001 chrX_4810001 RAL-301_125b 4203 chrX 4815023 4815036 chrX 4815178 4815191 5 155 0.0 17.0 8.5 0.5 168 chrX 4815023 intergenic not near genes chrX 4815107 intergenic not near genes chrX 4815191 intergenic not near genes chrX_5_4815001 chrX_4815001 RAL-301_125b 4204 chrX 4827939 4827990 chrX 4835345 4835387 Stalker4 13 7411 5.5 4.0 4.8 2.2 7448 chrX 4827939 intergenic not near genes chrX 4831663 intergenic not near genes chrX 4835387 intergenic not near genes chrX_13_4830001 chrX_4830001 RAL-301_125b 4205 chrX 4856092 4856149 chrX 4856220 4856227 28 121 14.0 10.5 12.2 2.1 135 chrX 4856092 intron CG42594 + chrX 4856160 intron CG42594 + chrX 4856227 intron CG42594 + chrX_28_4855001 chrX_4855001 RAL-301_125b 4206 chrX 4871172 4871226 chrX 4871322 4871376 14 149 3.0 0.0 1.5 5.6 204 chrX 4871172 intron CG42594 + chrX 4871274 intron CG42594 + chrX 4871376 intron CG42594 + chrX_14_4870001 chrX_4870001 RAL-301_125b 4207 chrX 4885735 4885801 chrX 4885873 4885914 13 133 4.5 7.5 6.0 1.9 179 chrX 4885735 intron CG42594 + chrX 4885824 intron CG42594 + chrX 4885914 intron CG42594 + chrX_13_4885001 chrX_4885001 RAL-301_125b 4208 chrX 4898240 4898241 chrX 4898368 4898369 4 128 6.5 8.0 7.2 0.5 129 chrX 4898240 intron CG42594 + chrX 4898304 intron CG42594 + chrX 4898369 intron CG42594 + chrX_4_4895001 chrX_4895001 RAL-301_125b 4209 chrX 4898244 4898278 chrX 4898362 4898405 5 126 0.0 7.0 3.5 1.1 161 chrX 4898244 intron CG42594 + chrX 4898324 intron CG42594 + chrX 4898405 intron CG42594 + chrX_5_4895001 chrX_4895001 RAL-301_125b 4210 chrX 4921548 4921604 chrX 4921693 4921749 20 145 6.0 7.5 6.8 2.6 201 chrX 4921548 3` UTR CG6903 + chrX 4921648 3` UTR CG6903 + chrX 4921749 3` UTR CG44774 - chrX_20_4920001 chrX_4920001 RAL-301_125b 4211 chrX 4931303 4931376 chrX 4931447 4931523 17 146 64.5 79.5 72.0 0.2 220 chrX 4931303 intron CG44774 - chrX 4931413 intron CG44774 - chrX 4931523 intron CG44774 - chrX_17_4930001 chrX_4930001 RAL-301_125b 4212 chrX 4990005 4990067 chrX 4997269 4997331 roo 25 7264 10.5 9.5 10.0 2.3 7326 chrX 4990005 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997331 intron CR44833 - chrX_25_4990001 chrX_4990001 RAL-301_125b 4213 chrX 5027429 5027451 chrX 5027563 5027585 10 134 2.5 11.5 7.0 1.2 156 chrX 5027429 intron CR44833 - chrX 5027507 intron CR44833 - chrX 5027585 intron CR44833 - chrX_10_5025001 chrX_5025001 RAL-301_125b 4214 chrX 5055806 5055843 chrX 5055988 5056025 7 182 7.0 6.0 6.5 0.9 219 chrX 5055806 intron,intron CR44833 -,ovo + chrX 5055916 intron,intron CR44833 -,ovo + chrX 5056025 intron,intron CR44833 -,ovo + chrX_7_5055001 chrX_5055001 RAL-301_125b 4215 chrX 5089405 5089452 chrX 5089538 5089585 21 130 14.0 11.5 12.8 1.5 180 chrX 5089405 5` UTR,5` UTR CG15465 +,rg + chrX 5089495 5` UTR,5` UTR CG15465 +,rg + chrX 5089585 5` UTR,5` UTR CG15465 +,rg + chrX_21_5085001 chrX_5085001 RAL-301_125b 4216 chrX 5096229 5096301 chrX 5103844 5103916 springer 29 7613 2.5 9.5 6.0 4.1 7687 chrX 5096229 intron,intron CG15465 +,rg + chrX 5100072 intron,intron CG15465 +,rg + chrX 5103916 intron,intron CG15465 +,rg + chrX_29_5100001 chrX_5100001 RAL-301_125b 4217 chrX 5105430 5105461 chrX 5105572 5105604 5 142 10.5 17.0 13.8 0.3 174 chrX 5105430 intron,intron CG15465 +,rg + chrX 5105517 intron,intron CG15465 +,rg + chrX 5105604 intron,intron CG15465 +,rg + chrX_5_5105001 chrX_5105001 RAL-301_125b 4218 chrX 5120614 5120662 chrX 5120772 5120818 5 157 4.0 5.0 4.5 0.9 204 chrX 5120614 intron,intron CG15465 +,rg + chrX 5120716 intron,intron CG15465 +,rg + chrX 5120818 intron,intron CG15465 +,rg + chrX_5_5120001 chrX_5120001 RAL-301_125b 4219 chrX 5122768 5122846 chrX 5123047 5123124 10 279 3.5 0.0 1.8 3.6 356 chrX 5122768 intron,intron CG15465 +,rg + chrX 5122946 intron,intron CG15465 +,rg + chrX 5123124 intron,intron CG15465 +,rg + chrX_10_5120001 chrX_5120001 RAL-301_125b 4220 chrX 5126730 5126805 chrX 5126871 5126945 22 138 4.5 6.5 5.5 3.4 215 chrX 5126730 intron,intron CG15465 +,rg + chrX 5126838 intron,intron CG15465 +,rg + chrX 5126945 intron,intron CG15465 +,rg + chrX_22_5125001 chrX_5125001 RAL-301_125b 4221 chrX 5147808 5147887 chrX 5147964 5148001 25 150 6.5 4.5 5.5 3.8 193 chrX 5147808 intron,intron CG15465 +,rg + chrX 5147904 intron,intron CG15465 +,rg + chrX 5148001 intron,intron CG15465 +,rg + chrX_25_5145001 chrX_5145001 RAL-301_125b 4222 chrX 5206266 5206318 chrX 5206578 5206641 21 320 8.5 7.5 8.0 2.3 375 chrX 5206266 intron,intron CG15465 +,rg + chrX 5206454 intron,intron CG15465 +,rg + chrX 5206641 intron,intron CG15465 +,rg + chrX_21_5205001 chrX_5205001 RAL-301_125b 4223 chrX 5220342 5220362 chrX 5220633 5220653 7 289 12.0 8.0 10.0 0.6 311 chrX 5220342 intron,intron CG15465 +,rg + chrX 5220498 intron,intron CG15465 +,rg + chrX 5220653 intron,intron CG15465 +,rg + chrX_7_5220001 chrX_5220001 RAL-301_125b 4224 chrX 5264004 5264069 chrX 5264144 5264209 18 140 4.5 4.5 4.5 3.3 205 chrX 5264004 intergenic not near genes chrX 5264106 intergenic not near genes chrX 5264209 intergenic not near genes chrX_18_5260001 chrX_5260001 RAL-301_125b 4225 chrX 5272775 5272847 chrX 5272912 5272985 25 134 4.0 10.0 7.0 3.1 210 chrX 5272775 intergenic not near genes chrX 5272880 intergenic not near genes chrX 5272985 intergenic not near genes chrX_25_5270001 chrX_5270001 RAL-301_125b 4226 chrX 5277507 5277578 chrX 5277730 5277798 28 223 7.0 6.0 6.5 3.7 291 chrX 5277507 intergenic not near genes chrX 5277652 intergenic not near genes chrX 5277798 intergenic not near genes chrX_28_5275001 chrX_5275001 RAL-301_125b 4227 chrX 5280092 5280143 chrX 5280353 5280408 21 265 8.0 8.5 8.2 2.3 316 chrX 5280092 intergenic not near genes chrX 5280250 intergenic not near genes chrX 5280408 intergenic not near genes chrX_21_5280001 chrX_5280001 RAL-301_125b 4228 chrX 5338669 5338737 chrX 5339972 5339995 jockey 22 1294 3.5 5.5 4.5 4.0 1326 chrX 5338669 intergenic not near genes chrX 5339332 intergenic not near genes chrX 5339995 intergenic SK + chrX_22_5335001 chrX_5335001 RAL-301_125b 4229 chrX 5349235 5349304 chrX 5349362 5349431 31 125 5.5 9.0 7.2 3.8 196 chrX 5349235 intron SK + chrX 5349333 intron SK + chrX 5349431 intron SK + chrX_31_5345001 chrX_5345001 RAL-301_125b 4230 chrX 5354009 5354036 chrX 5354153 5354180 6 144 3.0 12.5 7.8 0.7 171 chrX 5354009 intron SK + chrX 5354094 intron SK + chrX 5354180 intron SK + chrX_6_5350001 chrX_5350001 RAL-301_125b 4231 chrX 5366258 5366320 chrX 5366436 5366498 33 178 7.0 7.5 7.2 4.0 240 chrX 5366258 intron SK + chrX 5366378 intron SK + chrX 5366498 intron SK + chrX_33_5365001 chrX_5365001 RAL-301_125b 4232 chrX 5473543 5473617 chrX 5473669 5473722 29 123 5.0 6.5 5.8 4.3 179 chrX 5473543 intron SPR + chrX 5473632 intron SPR + chrX 5473722 intron SPR + chrX_29_5470001 chrX_5470001 RAL-301_125b 4233 chrX 5512008 5512011 chrX 5512141 5512144 4 133 7.0 1.5 4.2 0.8 136 chrX 5512008 intergenic not near genes chrX 5512076 intergenic not near genes chrX 5512144 intergenic not near genes chrX_4_5510001 chrX_5510001 RAL-301_125b 4234 chrX 5524794 5524829 chrX 5528703 5528738 412 9 3909 16.5 4.5 10.5 0.8 3944 chrX 5524794 intergenic snoRNA:Psi28S-3342 - chrX 5526766 intergenic not near genes chrX 5528738 intergenic Vsx2 - chrX_9_5525001 chrX_5525001 RAL-301_125b 4235 chrX 5564117 5564143 chrX 5564256 5564288 11 142 12.5 14.5 13.5 0.8 171 chrX 5564117 intergenic not near genes chrX 5564202 intergenic not near genes chrX 5564288 intergenic not near genes chrX_11_5560001 chrX_5560001 RAL-301_125b 4236 chrX 5566446 5566452 chrX 5566583 5566589 5 137 16.5 7.5 12.0 0.4 143 chrX 5566446 intergenic not near genes chrX 5566518 intergenic not near genes chrX 5566589 intergenic not near genes chrX_5_5565001 chrX_5565001 RAL-301_125b 4237 chrX 5566455 5566514 chrX 5566577 5566636 16 131 6.0 5.0 5.5 2.5 181 chrX 5566455 intergenic not near genes chrX 5566546 intergenic not near genes chrX 5566636 intergenic not near genes chrX_16_5565001 chrX_5565001 RAL-301_125b 4238 chrX 5579499 5579539 chrX 5579672 5579677 9 164 2.5 4.5 3.5 2.0 178 chrX 5579499 intergenic not near genes chrX 5579588 intergenic not near genes chrX 5579677 intergenic not near genes chrX_9_5575001 chrX_5575001 RAL-301_125b 4239 chrX 5579550 5579557 chrX 5579658 5579720 5 158 2.0 1.5 1.8 1.8 170 chrX 5579550 intergenic not near genes chrX 5579635 intergenic not near genes chrX 5579720 intergenic not near genes chrX_5_5575001 chrX_5575001 RAL-301_125b 4240 chrX 5727374 5727414 chrX 5732163 5732203 Doc 19 4789 8.5 8.5 8.5 2.0 4829 chrX 5727374 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732203 intron CG32758 - chrX_19_5725001 chrX_5725001 RAL-301_125b 4241 chrX 5832442 5832475 chrX 5832646 5832707 16 230 3.0 8.5 5.8 2.4 265 chrX 5832442 intron CG15765 + chrX 5832574 intron CG15765 + chrX 5832707 intron CG15765 + chrX_16_5830001 chrX_5830001 RAL-301_125b 4242 chrX 5883764 5883836 chrX 5884055 5884127 pogo 28 290 6.0 6.5 6.2 3.9 363 chrX 5883764 intron CR45668 - chrX 5883946 intron CR45668 - chrX 5884127 intron CR45668 - chrX_28_5880001 chrX_5880001 RAL-301_125b 4243 chrX 5884127 5884184 chrX 5884417 5884475 pogo 20 291 7.5 10.0 8.8 2.0 348 chrX 5884127 intron CR45668 - chrX 5884301 intron CR45668 - chrX 5884475 intron CR45668 - chrX_20_5880001 chrX_5880001 RAL-301_125b 4244 chrX 6080783 6080828 chrX 6080917 6080962 11 131 12.5 5.0 8.8 1.1 179 chrX 6080783 intron CG4660 - chrX 6080872 intron CG4660 - chrX 6080962 intron CG4660 - chrX_11_6080001 chrX_6080001 RAL-301_125b 4245 chrX 6100446 6100525 chrX 6100619 6100671 16 171 3.5 4.5 4.0 3.2 225 chrX 6100446 intron Nep1 + chrX 6100558 intron Nep1 + chrX 6100671 intron Nep1 + chrX_16_6100001 chrX_6100001 RAL-301_125b 4246 chrX 6115859 6115924 chrX 6116046 6116110 17 187 5.0 12.0 8.5 1.8 251 chrX 6115859 intron Ca-alpha1T - chrX 6115984 intron Ca-alpha1T - chrX 6116110 intron Ca-alpha1T - chrX_17_6115001 chrX_6115001 RAL-301_125b 4247 chrX 6171545 6171606 chrX 6179028 6179089 Quasimodo 12 7483 8.5 7.0 7.8 1.4 7544 chrX 6171545 intron Ca-alpha1T - chrX 6175317 intron Ca-alpha1T - chrX 6179089 intron Ca-alpha1T - chrX_12_6175001 chrX_6175001 RAL-301_125b 4248 chrX 6197487 6197555 chrX 6197618 6197686 26 128 7.5 5.0 6.2 3.6 199 chrX 6197487 exon CG32751 - chrX 6197586 exon CG32751 - chrX 6197686 intron CG32751 - chrX_26_6195001 chrX_6195001 RAL-301_125b 4249 chrX 6215483 6215522 chrX 6215614 6215640 10 129 10.5 10.0 10.2 0.9 157 chrX 6215483 intergenic not near genes chrX 6215562 intergenic not near genes chrX 6215640 intergenic not near genes chrX_10_6215001 chrX_6215001 RAL-301_125b 4250 chrX 6312146 6312217 chrX 6312279 6312350 34 131 10.0 13.0 11.5 2.7 204 chrX 6312146 intron CG15894 + chrX 6312248 intron CG15894 + chrX 6312350 intron CG15894 + chrX_34_6310001 chrX_6310001 RAL-301_125b 4251 chrX 6335165 6335239 chrX 6337723 6337799 Tirant 14 2556 0.0 9.5 4.8 2.4 2634 chrX 6335165 intergenic not near genes chrX 6336482 intergenic not near genes chrX 6337799 5` UTR CG3842 + chrX_14_6335001 chrX_6335001 RAL-301_125b 4252 chrX 6392832 6392868 chrX 6397640 6397677 Doc 6 4811 10.0 0.0 5.0 1.0 4845 chrX 6392832 intergenic not near genes chrX 6395254 intergenic not near genes chrX 6397677 intergenic not near genes chrX_6_6395001 chrX_6395001 RAL-301_125b 4253 chrX 6429970 6429994 chrX 6435479 6435489 Rt1c 8 5504 12.0 14.5 13.2 0.6 5519 chrX 6429970 intron CG42340 - chrX 6432730 intron CG42340 - chrX 6435489 intron CG42340 - chrX_8_6430001 chrX_6430001 RAL-301_125b 4254 chrX 6445262 6445333 chrX 6451070 6451141 297 8 5808 6.0 6.0 6.0 1.1 5879 chrX 6445262 intron CG42340 - chrX 6448202 intron CG42340 - chrX 6451141 intron CG42340 - chrX_8_6445001 chrX_6445001 RAL-301_125b 4255 chrX 6470584 6470641 chrX 6470807 6470835 13 212 7.0 1.0 4.0 2.6 251 chrX 6470584 intron CG42340 - chrX 6470710 intron CG42340 - chrX 6470835 intron CG42340 - chrX_13_6470001 chrX_6470001 RAL-301_125b 4256 chrX 6498918 6498937 chrX 6499329 6499348 7 411 13.0 6.5 9.8 0.6 430 chrX 6498918 intron CG42340 - chrX 6499133 intron CG42340 - chrX 6499348 intron CG42340 - chrX_7_6495001 chrX_6495001 RAL-301_125b 4257 chrX 6538548 6538594 chrX 6538698 6538744 18 150 11.0 15.5 13.2 1.3 196 chrX 6538548 3` UTR dx + chrX 6538646 intergenic dx + chrX 6538744 intergenic dx + chrX_18_6535001 chrX_6535001 RAL-301_125b 4258 chrX 6539871 6539944 chrX 6540023 6540096 17 151 2.0 7.5 4.8 2.9 225 chrX 6539871 intergenic not near genes chrX 6539984 intergenic not near genes chrX 6540096 intergenic not near genes chrX_17_6535001 chrX_6535001 RAL-301_125b 4259 chrX 6562778 6562840 chrX 6571310 6571360 Tirant 24 8526 9.5 7.0 8.2 2.6 8582 chrX 6562778 intron CG34417 + chrX 6567069 intron CG34417 + chrX 6571360 intron CG34417 + chrX_24_6565001 chrX_6565001 RAL-301_125b 4260 chrX 6591805 6591851 chrX 6591940 6591986 14 135 7.0 0.0 3.5 3.1 181 chrX 6591805 intron Pat1 + chrX 6591896 intron Pat1 + chrX 6591986 intron Pat1 + chrX_14_6590001 chrX_6590001 RAL-301_125b 4261 chrX 6605439 6605503 chrX 6608511 6608575 Burdock 24 3072 7.5 8.5 8.0 2.7 3136 chrX 6605439 intron pigs + chrX 6607007 intron pigs + chrX 6608575 intron pigs + chrX_24_6605001 chrX_6605001 RAL-301_125b 4262 chrX 6617254 6617296 chrX 6617848 6617870 9 589 10.5 9.5 10.0 0.8 616 chrX 6617254 intron pigs + chrX 6617562 intron pigs + chrX 6617870 intron pigs + chrX_9_6615001 chrX_6615001 RAL-301_125b 4263 chrX 6629740 6629794 chrX 6629877 6629931 14 137 7.5 6.5 7.0 1.8 191 chrX 6629740 intron pigs + chrX 6629836 intron pigs + chrX 6629931 intron pigs + chrX_14_6625001 chrX_6625001 RAL-301_125b 4264 chrX 6652979 6653031 chrX 6653100 6653137 17 124 14.0 13.5 13.8 1.1 158 chrX 6652979 3` UTR pigs + chrX 6653058 intergenic pigs +,CG3226 - chrX 6653137 3` UTR CG3226 - chrX_17_6650001 chrX_6650001 RAL-301_125b 4265 chrX 6733648 6733662 chrX 6733779 6733793 9 130 11.5 11.0 11.2 0.7 145 chrX 6733648 intron,intron CG3168 -,CR43461 + chrX 6733720 intron,intron CG3168 -,CR43461 + chrX 6733793 intron,intron CG3168 -,CR43461 + chrX_9_6730001 chrX_6730001 RAL-301_125b 4266 chrX 6792046 6792091 chrX 6792182 6792227 17 135 7.0 10.0 8.5 1.8 181 chrX 6792046 intron C3G - chrX 6792136 intron C3G - chrX 6792227 intron C3G - chrX_17_6790001 chrX_6790001 RAL-301_125b 4267 chrX 6814234 6814255 chrX 6814371 6814392 5 137 6.0 3.5 4.8 0.9 158 chrX 6814234 exon iav + chrX 6814313 intron iav + chrX 6814392 intron iav + chrX_5_6810001 chrX_6810001 RAL-301_125b 4268 chrX 6865739 6865797 chrX 6865870 6865931 17 133 8.0 10.5 9.2 1.7 192 chrX 6865739 intron CG14434 - chrX 6865835 intron CG14434 - chrX 6865931 intron CG14434 - chrX_17_6865001 chrX_6865001 RAL-301_125b 4269 chrX 6891703 6891727 chrX 6891832 6891860 7 135 9.5 11.5 10.5 0.6 157 chrX 6891703 intergenic not near genes chrX 6891782 intergenic not near genes chrX 6891860 intergenic not near genes chrX_7_6890001 chrX_6890001 RAL-301_125b 4270 chrX 6891728 6891745 chrX 6891828 6891884 4 115 6.0 10.5 8.2 0.4 156 chrX 6891728 intergenic not near genes chrX 6891806 intergenic not near genes chrX 6891884 intergenic not near genes chrX_4_6890001 chrX_6890001 RAL-301_125b 4271 chrX 6897276 6897292 chrX 6897626 6897642 5 350 3.0 4.5 3.8 1.0 366 chrX 6897276 intergenic not near genes chrX 6897459 intergenic not near genes chrX 6897642 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-301_125b 4272 chrX 6897638 6897710 chrX 6897798 6897870 23 157 3.0 5.0 4.0 4.6 232 chrX 6897638 intergenic not near genes chrX 6897754 intergenic not near genes chrX 6897870 intergenic not near genes chrX_23_6895001 chrX_6895001 RAL-301_125b 4273 chrX 6901329 6901379 chrX 6901455 6901500 20 122 4.5 9.0 6.8 2.6 171 chrX 6901329 intergenic not near genes chrX 6901414 intergenic not near genes chrX 6901500 intergenic not near genes chrX_20_6900001 chrX_6900001 RAL-301_125b 4274 chrX 6988486 6988526 chrX 6988621 6988661 9 135 14.0 5.0 9.5 0.9 175 chrX 6988486 intron ogre - chrX 6988574 intron ogre - chrX 6988661 intron ogre - chrX_9_6985001 chrX_6985001 RAL-301_125b 4275 chrX 6989471 6989527 chrX 6989608 6989664 23 136 6.5 9.5 8.0 2.6 193 chrX 6989471 intron ogre - chrX 6989568 intron ogre - chrX 6989664 intron ogre - chrX_23_6985001 chrX_6985001 RAL-301_125b 4276 chrX 7023558 7023572 chrX 7030998 7031012 Tabor 9 7440 17.0 7.5 12.2 0.7 7454 chrX 7023558 intron CG12541 - chrX 7027285 intron CG12541 - chrX 7031012 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-301_125b 4277 chrX 7023573 7023625 chrX 7030993 7031065 Tabor 16 7438 8.5 6.5 7.5 1.9 7492 chrX 7023573 intron CG12541 - chrX 7027319 intron CG12541 - chrX 7031065 intron CG12541 - chrX_16_7025001 chrX_7025001 RAL-301_125b 4278 chrX 7125220 7125265 chrX 7134429 7134474 roo 27 9209 0.5 12.5 6.5 3.6 9254 chrX 7125220 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134474 intergenic not near genes chrX_27_7125001 chrX_7125001 RAL-301_125b 4279 chrX 7235509 7235537 chrX 7235645 7235674 6 137 8.5 8.0 8.2 0.7 165 chrX 7235509 intron,intron CG9650 +,CR44357 - chrX 7235592 intron,intron CG9650 +,CR44357 - chrX 7235674 intron,intron CG9650 +,CR44357 - chrX_6_7235001 chrX_7235001 RAL-301_125b 4280 chrX 7294470 7294491 chrX 7294618 7294638 9 146 24.0 7.0 15.5 0.5 168 chrX 7294470 intron,intron CR44357 -,CG1677 - chrX 7294554 intron,intron CR44357 -,CG1677 - chrX 7294638 intron,intron CR44357 -,CG1677 - chrX_9_7290001 chrX_7290001 RAL-301_125b 4281 chrX 7294494 7294539 chrX 7294617 7294642 15 133 13.5 7.0 10.2 1.3 148 chrX 7294494 intron,intron CR44357 -,CG1677 - chrX 7294568 intron,intron CR44357 -,CG1677 - chrX 7294642 intron,intron CR44357 -,CG1677 - chrX_15_7290001 chrX_7290001 RAL-301_125b 4282 chrX 7345149 7345215 chrX 7345291 7345357 19 139 5.5 6.0 5.8 2.8 208 chrX 7345149 intron,intron CR44357 -,CG1677 - chrX 7345253 intron,intron CR44357 -,CG1677 - chrX 7345357 intron,intron CR44357 -,CG1677 - chrX_19_7345001 chrX_7345001 RAL-301_125b 4283 chrX 6897318 6897599 chrX 7441618 7441693 15 544287 5.0 17.5 11.2 1.2 544375 chrX 6897318 intergenic not near genes chrX 7169506 intron,intron CG9650 +,CR44357 - chrX 7441693 intergenic not near genes chrX_15_7165001 chrX_7165001 RAL-301_125b 4284 chrX 7469215 7469282 chrX 7469655 7469717 7 439 6.0 2.5 4.2 1.3 502 chrX 7469215 intergenic not near genes chrX 7469466 intergenic not near genes chrX 7469717 intergenic not near genes chrX_7_7465001 chrX_7465001 RAL-301_125b 4285 chrX 7470179 7470217 chrX 7470317 7470355 9 138 6.0 3.5 4.8 1.6 176 chrX 7470179 intergenic not near genes chrX 7470267 intergenic not near genes chrX 7470355 intergenic not near genes chrX_9_7470001 chrX_7470001 RAL-301_125b 4286 chrX 7570597 7570664 chrX 7570776 7570848 18 183 3.0 4.5 3.8 3.8 251 chrX 7570597 intergenic not near genes chrX 7570722 intergenic not near genes chrX 7570848 intergenic not near genes chrX_18_7570001 chrX_7570001 RAL-301_125b 4287 chrX 7573125 7573171 chrX 7573252 7573298 17 126 9.0 8.5 8.8 1.7 173 chrX 7573125 intergenic not near genes chrX 7573212 intergenic not near genes chrX 7573298 intergenic not near genes chrX_17_7570001 chrX_7570001 RAL-301_125b 4288 chrX 7702865 7702921 chrX 7703353 7703410 jockey 13 489 13.5 7.5 10.5 1.1 545 chrX 7702865 intron CHES-1-like - chrX 7703138 intron CHES-1-like - chrX 7703410 intron CHES-1-like - chrX_13_7700001 chrX_7700001 RAL-301_125b 4289 chrX 7705468 7705539 chrX 7705600 7705671 27 132 3.5 9.5 6.5 3.6 203 chrX 7705468 intron CHES-1-like - chrX 7705570 intron CHES-1-like - chrX 7705671 intron CHES-1-like - chrX_27_7705001 chrX_7705001 RAL-301_125b 4290 chrX 7720520 7720537 chrX 7720652 7720669 5 132 13.5 0.0 6.8 0.6 149 chrX 7720520 intergenic not near genes chrX 7720594 intergenic not near genes chrX 7720669 intergenic not near genes chrX_5_7720001 chrX_7720001 RAL-301_125b 4291 chrX 7720539 7720573 chrX 7720646 7720685 15 120 7.5 0.0 3.8 3.1 146 chrX 7720539 intergenic not near genes chrX 7720612 intergenic not near genes chrX 7720685 intergenic not near genes chrX_15_7720001 chrX_7720001 RAL-301_125b 4292 chrX 7737081 7737146 chrX 7737243 7737308 12 162 5.5 4.5 5.0 2.0 227 chrX 7737081 5` UTR Tom40 + chrX 7737194 intron Tom40 + chrX 7737308 intron Tom40 + chrX_12_7735001 chrX_7735001 RAL-301_125b 4293 chrX 7784199 7784251 chrX 7784542 7784603 jockey 4 348 8.5 10.5 9.5 0.4 404 chrX 7784199 intergenic not near genes chrX 7784401 intergenic not near genes chrX 7784603 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-301_125b 4294 chrX 7832393 7832463 chrX 7832532 7832602 15 139 4.5 6.0 5.2 2.4 209 chrX 7832393 intron CG1402 + chrX 7832498 intron CG1402 + chrX 7832602 intron CG1402 + chrX_15_7830001 chrX_7830001 RAL-301_125b 4295 chrX 7845679 7845759 chrX 7847220 7847247 hopper2 26 1539 8.5 6.0 7.2 3.2 1568 chrX 7845679 intergenic not near genes chrX 7846463 intergenic not near genes chrX 7847247 intergenic not near genes chrX_26_7845001 chrX_7845001 RAL-301_125b 4296 chrX 7960828 7960901 chrX 7960967 7961040 30 139 6.5 6.5 6.5 4.0 212 chrX 7960828 intron,5` UTR sws -,CR45620 + chrX 7960934 intron sws - chrX 7961040 intron sws - chrX_30_7960001 chrX_7960001 RAL-301_125b 4297 chrX 8031404 8031450 chrX 8035763 8035809 Juan 13 4359 3.5 10.5 7.0 1.6 4405 chrX 8031404 intergenic not near genes chrX 8033606 intergenic not near genes chrX 8035809 3` UTR CG2233 - chrX_13_8030001 chrX_8030001 RAL-301_125b 4298 chrX 8038872 8038890 chrX 8039004 8039022 7 132 8.0 6.0 7.0 0.9 150 chrX 8038872 3` UTR fs(1)h - chrX 8038947 3` UTR fs(1)h - chrX 8039022 3` UTR fs(1)h - chrX_7_8035001 chrX_8035001 RAL-301_125b 4299 chrX 8092247 8092306 chrX 8092382 8092441 15 135 2.0 6.0 4.0 3.0 194 chrX 8092247 intron Ubc-E2H - chrX 8092344 intron Ubc-E2H - chrX 8092441 intron Ubc-E2H - chrX_15_8090001 chrX_8090001 RAL-301_125b 4300 chrX 8232113 8232164 chrX 8232240 8232249 16 123 14.5 10.0 12.2 1.2 136 chrX 8232113 intron sdt + chrX 8232181 intron sdt + chrX 8232249 intron sdt + chrX_16_8230001 chrX_8230001 RAL-301_125b 4301 chrX 8288087 8288120 chrX 8288219 8288252 4 132 3.0 4.5 3.8 0.8 165 chrX 8288087 intron nAChRalpha3 - chrX 8288170 intron nAChRalpha3 - chrX 8288252 intron nAChRalpha3 - chrX_4_8285001 chrX_8285001 RAL-301_125b 4302 chrX 8304206 8304245 chrX 8304362 8304401 8 156 4.0 6.0 5.0 1.3 195 chrX 8304206 intron nAChRalpha3 - chrX 8304304 intron nAChRalpha3 - chrX 8304401 intron nAChRalpha3 - chrX_8_8300001 chrX_8300001 RAL-301_125b 4303 chrX 8327245 8327273 chrX 8327374 8327402 11 129 9.5 8.0 8.8 1.1 157 chrX 8327245 intron nAChRalpha3 - chrX 8327324 intron nAChRalpha3 - chrX 8327402 intron nAChRalpha3 - chrX_11_8325001 chrX_8325001 RAL-301_125b 4304 chrX 8364801 8364868 chrX 8365248 8365315 BS 15 445 7.0 8.5 7.8 1.7 514 chrX 8364801 intron nAChRalpha3 - chrX 8365058 intron nAChRalpha3 - chrX 8365315 intron nAChRalpha3 - chrX_15_8365001 chrX_8365001 RAL-301_125b 4305 chrX 8377867 8377895 chrX 8377994 8378022 7 126 6.5 3.5 5.0 1.2 155 chrX 8377867 intergenic not near genes chrX 8377944 intergenic not near genes chrX 8378022 intergenic not near genes chrX_7_8375001 chrX_8375001 RAL-301_125b 4306 chrX 8509072 8509148 chrX 8509199 8509275 18 127 1.0 10.5 5.8 2.6 203 chrX 8509072 intron CG33181 + chrX 8509174 intron CG33181 + chrX 8509275 intron CG33181 + chrX_18_8505001 chrX_8505001 RAL-301_125b 4307 chrX 8536723 8536731 chrX 8536849 8536857 5 126 18.0 9.5 13.8 0.3 134 chrX 8536723 intron Nrg + chrX 8536790 intron Nrg + chrX 8536857 intron Nrg + chrX_5_8535001 chrX_8535001 RAL-301_125b 4308 chrX 8536732 8536774 chrX 8536848 8536900 13 125 9.5 9.5 9.5 1.2 168 chrX 8536732 intron Nrg + chrX 8536816 intron Nrg + chrX 8536900 intron Nrg + chrX_13_8535001 chrX_8535001 RAL-301_125b 4309 chrX 8743222 8743257 chrX 8743350 8743385 15 128 3.0 8.0 5.5 2.3 163 chrX 8743222 intergenic not near genes chrX 8743304 intergenic not near genes chrX 8743385 intergenic not near genes chrX_15_8740001 chrX_8740001 RAL-301_125b 4310 chrX 8772205 8772250 chrX 8772334 8772364 19 127 9.0 9.5 9.2 1.9 159 chrX 8772205 intron Lim1 - chrX 8772284 intron Lim1 - chrX 8772364 intron Lim1 - chrX_19_8770001 chrX_8770001 RAL-301_125b 4311 chrX 8809104 8809181 chrX 8809356 8809433 23 250 5.0 5.0 5.0 3.8 329 chrX 8809104 intergenic not near genes chrX 8809268 intergenic not near genes chrX 8809433 intergenic not near genes chrX_23_8805001 chrX_8805001 RAL-301_125b 4312 chrX 8829945 8829966 chrX 8830086 8830134 4 160 11.0 13.0 12.0 0.3 189 chrX 8829945 intergenic not near genes chrX 8830040 intergenic not near genes chrX 8830134 intergenic not near genes chrX_4_8830001 chrX_8830001 RAL-301_125b 4313 chrX 8858533 8858545 chrX 8858659 8858671 6 126 9.5 3.0 6.2 0.8 138 chrX 8858533 intron CG12075 + chrX 8858602 intron CG12075 + chrX 8858671 intron CG12075 + chrX_6_8855001 chrX_8855001 RAL-301_125b 4314 chrX 8885627 8885695 chrX 8885777 8885845 18 147 0.0 7.0 3.5 4.0 218 chrX 8885627 intron Moe - chrX 8885736 intron Moe - chrX 8885845 intron Moe - chrX_18_8885001 chrX_8885001 RAL-301_125b 4315 chrX 8893174 8893244 chrX 8893304 8893374 27 129 7.5 9.0 8.2 2.9 200 chrX 8893174 intron Moe - chrX 8893274 intron Moe - chrX 8893374 intron Moe - chrX_27_8890001 chrX_8890001 RAL-301_125b 4316 chrX 8894949 8895002 chrX 8895084 8895138 11 136 4.0 6.5 5.2 1.8 189 chrX 8894949 intron Moe - chrX 8895044 intron Moe - chrX 8895138 intron Moe - chrX_11_8895001 chrX_8895001 RAL-301_125b 4317 chrX 8922284 8922353 chrX 8922767 8922822 jockey 15 483 8.5 6.5 7.5 1.8 538 chrX 8922284 intron rdgA + chrX 8922553 intron rdgA + chrX 8922822 intron rdgA + chrX_15_8920001 chrX_8920001 RAL-301_125b 4318 chrX 8948713 8948785 chrX 8956273 8956345 roo 15 7560 0.0 5.0 2.5 4.3 7632 chrX 8948713 intron rdgA + chrX 8952529 intron rdgA + chrX 8956345 intron rdgA + chrX_15_8950001 chrX_8950001 RAL-301_125b 4319 chrX 8968815 8968858 chrX 8968944 8968982 10 128 15.0 17.0 16.0 0.6 167 chrX 8968815 intron rdgA + chrX 8968898 intron rdgA + chrX 8968982 intron rdgA + chrX_10_8965001 chrX_8965001 RAL-301_125b 4320 chrX 9058899 9058960 chrX 9059026 9059051 21 114 10.5 8.5 9.5 2.0 152 chrX 9058899 intron CG15365 - chrX 9058975 intron CG15365 - chrX 9059051 intron CG15365 - chrX_21_9055001 chrX_9055001 RAL-301_125b 4321 chrX 9229861 9229937 chrX 9229991 9230030 25 128 7.0 9.5 8.2 2.7 169 chrX 9229861 intron CG12121 - chrX 9229946 intron CG12121 - chrX 9230030 intron CG12121 - chrX_25_9225001 chrX_9225001 RAL-301_125b 4322 chrX 9337894 9337954 chrX 9338036 9338075 13 138 7.0 5.0 6.0 1.9 181 chrX 9337894 intron CG34449 - chrX 9337984 intron CG34449 - chrX 9338075 exon CG34449 - chrX_13_9335001 chrX_9335001 RAL-301_125b 4323 chrX 9503211 9503211 chrX 22383088 22383377 6 12880069 17.5 107.0 62.2 0.1 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_6_15940001 chrX_15940001 RAL-301_125b 4324 chrX 9508100 9508146 chrX 9509662 9509714 jockey 13 1567 8.0 4.0 6.0 1.9 1614 chrX 9508100 intron CG32700 - chrX 9508907 intron CG32700 - chrX 9509714 intron CG32700 - chrX_13_9505001 chrX_9505001 RAL-301_125b 4325 chrX 9537063 9537131 chrX 9537370 9537438 26 307 7.0 5.5 6.2 3.6 375 chrX 9537063 intron CG32700 - chrX 9537250 intron CG32700 - chrX 9537438 intron CG32700 - chrX_26_9535001 chrX_9535001 RAL-301_125b 4326 chrX 9575748 9575817 chrX 9576119 9576191 mdg3 28 373 7.5 7.0 7.2 3.4 443 chrX 9575748 intron,exon CG32699 -,CG42395 - chrX 9575970 intron,intron CG32699 -,CG42395 - chrX 9576191 intron,5` UTR CG32699 -,CG42395 - chrX_28_9575001 chrX_9575001 RAL-301_125b 4327 chrX 9732330 9732380 chrX 9732456 9732512 8 127 5.5 5.0 5.2 1.3 182 chrX 9732330 intron Sp1 + chrX 9732421 intron Sp1 + chrX 9732512 intron Sp1 + chrX_8_9730001 chrX_9730001 RAL-301_125b 4328 chrX 9758002 9758046 chrX 9758137 9758181 23 135 12.5 0.0 6.2 3.2 179 chrX 9758002 intergenic not near genes chrX 9758092 intergenic not near genes chrX 9758181 intergenic not near genes chrX_23_9755001 chrX_9755001 RAL-301_125b 4329 chrX 9834947 9834966 chrX 9835068 9835073 5 129 12.0 12.5 12.2 0.4 126 chrX 9834947 intron CG32698 + chrX 9835010 intron CG32698 + chrX 9835073 intron CG32698 + chrX_5_9835001 chrX_9835001 RAL-301_125b 4330 chrX 9839325 9839370 chrX 9839459 9839503 5 133 0.0 14.5 7.2 0.6 178 chrX 9839325 intron CG32698 + chrX 9839414 intron CG32698 + chrX 9839503 intron CG32698 + chrX_5_9835001 chrX_9835001 RAL-301_125b 4331 chrX 9854410 9854468 chrX 9854541 9854599 21 131 5.0 2.5 3.8 4.4 189 chrX 9854410 intergenic not near genes chrX 9854504 intergenic not near genes chrX 9854599 intergenic not near genes chrX_21_9850001 chrX_9850001 RAL-301_125b 4332 chrX 9923355 9923359 chrX 9923496 9923500 5 141 18.0 9.0 13.5 0.3 145 chrX 9923355 intergenic not near genes chrX 9923428 intergenic not near genes chrX 9923500 intergenic not near genes chrX_5_9920001 chrX_9920001 RAL-301_125b 4333 chrX 9923360 9923418 chrX 9923481 9923559 20 137 8.0 7.5 7.8 2.3 199 chrX 9923360 intergenic not near genes chrX 9923460 intergenic not near genes chrX 9923559 intergenic not near genes chrX_20_9920001 chrX_9920001 RAL-301_125b 4334 chrX 10138175 10138241 chrX 10145729 10145795 412 23 7554 5.0 8.5 6.8 2.9 7620 chrX 10138175 intron,intron RhoU +,CR44894 - chrX 10141985 intron,intron RhoU +,CR44894 - chrX 10145795 intron,intron RhoU +,CR44894 - chrX_23_10140001 chrX_10140001 RAL-301_125b 4335 chrX 10154241 10154307 chrX 10154367 10154433 24 125 9.5 6.0 7.8 2.7 192 chrX 10154241 intron,intron CR44894 -,CG12645 + chrX 10154337 intron,intron CR44894 -,CG12645 + chrX 10154433 intron,exon CR44894 -,CG12645 + chrX_24_10150001 chrX_10150001 RAL-301_125b 4336 chrX 10169918 10169981 chrX 10170049 10170067 8 125 0.0 8.0 4.0 1.6 149 chrX 10169918 intron,intron CR44894 -,CG43902 + chrX 10169992 intron,intron CR44894 -,CG43902 + chrX 10170067 intron,intron CR44894 -,CG43902 + chrX_8_10170001 chrX_10170001 RAL-301_125b 4337 chrX 10267296 10267329 chrX 10276496 10276529 roo 12 9200 0.0 11.0 5.5 1.8 9233 chrX 10267296 3` UTR alpha-Man-I - chrX 10271912 intron alpha-Man-I - chrX 10276529 3` UTR alpha-Man-I - chrX_12_10270001 chrX_10270001 RAL-301_125b 4338 chrX 10306005 10306080 chrX 10306145 10306223 6 142 3.5 0.0 1.8 2.1 218 chrX 10306005 intron alpha-Man-I - chrX 10306114 intron alpha-Man-I - chrX 10306223 intron alpha-Man-I - chrX_6_10305001 chrX_10305001 RAL-301_125b 4339 chrX 10317503 10317581 chrX 10317633 10317709 17 127 1.5 4.0 2.8 4.5 206 chrX 10317503 intron alpha-Man-I - chrX 10317606 intron alpha-Man-I - chrX 10317709 intron alpha-Man-I - chrX_17_10315001 chrX_10315001 RAL-301_125b 4340 chrX 10348756 10348816 chrX 10356371 10356431 springer 22 7615 15.5 11.0 13.2 1.5 7675 chrX 10348756 intergenic snoRNA:U3:9B + chrX 10352594 intergenic not near genes chrX 10356431 intergenic l(1)G0289 - chrX_22_10350001 chrX_10350001 RAL-301_125b 4341 chrX 10417354 10417422 chrX 10417481 10417524 19 126 4.5 11.0 7.8 2.2 170 chrX 10417354 intron CG32683 - chrX 10417439 intron,5` UTR CG32683 -,RabX2 + chrX 10417524 intron,exon CG32683 -,RabX2 + chrX_19_10415001 chrX_10415001 RAL-301_125b 4342 chrX 10428814 10428891 chrX 10428959 10429031 21 141 2.0 8.5 5.2 3.4 217 chrX 10428814 intron CG32683 - chrX 10428922 intron CG32683 - chrX 10429031 intron CG32683 - chrX_21_10425001 chrX_10425001 RAL-301_125b 4343 chrX 10440660 10440710 chrX 10440789 10440824 18 125 10.0 13.0 11.5 1.4 164 chrX 10440660 intron CG32683 - chrX 10440742 intron CG32683 - chrX 10440824 intron CG32683 - chrX_18_10440001 chrX_10440001 RAL-301_125b 4344 chrX 10489557 10489628 chrX 10489750 10489822 17 192 6.0 3.5 4.8 2.9 265 chrX 10489557 intergenic not near genes chrX 10489690 intergenic not near genes chrX 10489822 intergenic not near genes chrX_17_10485001 chrX_10485001 RAL-301_125b 4345 chrX 10525037 10525068 chrX 10532139 10532171 297 5 7101 7.0 8.0 7.5 0.6 7134 chrX 10525037 intron spri - chrX 10528604 intron spri - chrX 10532171 intron spri - chrX_5_10525001 chrX_10525001 RAL-301_125b 4346 chrX 10550814 10550882 chrX 10552331 10552392 hobo 15 1513 7.5 5.5 6.5 2.0 1578 chrX 10550814 intron spri - chrX 10551603 intron spri - chrX 10552392 intron spri - chrX_15_10550001 chrX_10550001 RAL-301_125b 4347 chrX 10630558 10630620 chrX 10630727 10630789 25 169 7.0 10.0 8.5 2.6 231 chrX 10630558 intron X11Lbeta + chrX 10630674 intron X11Lbeta + chrX 10630789 intron X11Lbeta + chrX_25_10630001 chrX_10630001 RAL-301_125b 4348 chrX 10686006 10686012 chrX 10691193 10691199 roo 5 5187 20.0 0.0 10.0 0.5 5193 chrX 10686006 intron X11Lbeta + chrX 10688602 intron X11Lbeta + chrX 10691199 intron X11Lbeta + chrX_5_10685001 chrX_10685001 RAL-301_125b 4349 chrX 10686013 10686078 chrX 10691192 10691265 roo 25 5187 9.0 0.0 4.5 4.5 5252 chrX 10686013 intron X11Lbeta + chrX 10688639 intron X11Lbeta + chrX 10691265 intron X11Lbeta + chrX_25_10685001 chrX_10685001 RAL-301_125b 4350 chrX 10772637 10772697 chrX 10772770 10772830 Tirant 13 129 6.0 10.5 8.2 1.4 193 chrX 10772637 intron CG15211 + chrX 10772734 intron CG15211 + chrX 10772830 intron CG15211 + chrX_13_10770001 chrX_10770001 RAL-301_125b 4351 chrX 10802987 10803044 chrX 10803122 10803179 27 133 12.5 11.0 11.8 2.1 192 chrX 10802987 intron Imp - chrX 10803083 intron Imp - chrX 10803179 intron Imp - chrX_27_10800001 chrX_10800001 RAL-301_125b 4352 chrX 10933893 10933942 chrX 10934029 10934080 23 136 0.0 14.5 7.2 2.8 187 chrX 10933893 intron Myo10A + chrX 10933986 intron Myo10A + chrX 10934080 intron Myo10A + chrX_23_10930001 chrX_10930001 RAL-301_125b 4353 chrX 11034246 11034317 chrX 11034626 11034697 30 379 10.0 4.5 7.2 3.7 451 chrX 11034246 intron CG42339 - chrX 11034472 intron CG42339 - chrX 11034697 intron CG42339 - chrX_30_11030001 chrX_11030001 RAL-301_125b 4354 chrX 11095955 11096019 chrX 11103107 11103171 HMS-Beagle 28 7152 9.5 10.0 9.8 2.6 7216 chrX 11095955 intergenic not near genes chrX 11099563 intergenic not near genes chrX 11103171 intron CG42249 + chrX_28_11095001 chrX_11095001 RAL-301_125b 4355 chrX 11109417 11109417 chrX 12946233 12946234 8 1836817 35.0 24.5 29.8 0.3 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_8_12025001 chrX_12025001 RAL-301_125b 4356 chrX 11167757 11167796 chrX 11167894 11167943 12 144 0.0 10.0 5.0 2.0 186 chrX 11167757 intergenic antdh - chrX 11167850 intergenic antdh - chrX 11167943 intergenic antdh - chrX_12_11165001 chrX_11165001 RAL-301_125b 4357 chrX 11184208 11184265 chrX 11189334 11189391 flea 7 5126 7.0 8.5 7.8 0.8 5183 chrX 11184208 intergenic not near genes chrX 11186800 intergenic not near genes chrX 11189391 intergenic not near genes chrX_7_11185001 chrX_11185001 RAL-301_125b 4358 chrX 11191844 11191921 chrX 11191972 11192049 23 128 5.0 9.5 7.2 2.8 205 chrX 11191844 intergenic not near genes chrX 11191946 intergenic not near genes chrX 11192049 intergenic not near genes chrX_23_11190001 chrX_11190001 RAL-301_125b 4359 chrX 11214691 11214767 chrX 11214823 11214898 23 132 8.0 6.0 7.0 2.9 207 chrX 11214691 intergenic not near genes chrX 11214794 intergenic not near genes chrX 11214898 intergenic not near genes chrX_23_11210001 chrX_11210001 RAL-301_125b 4360 chrX 11268541 11268588 chrX 11270071 11270121 hopper2 14 1540 0.0 9.0 4.5 2.5 1580 chrX 11268541 intron CG44422 - chrX 11269331 intron CG44422 - chrX 11270121 intron CG44422 - chrX_14_11265001 chrX_11265001 RAL-301_125b 4361 chrX 11312013 11312083 chrX 11319416 11319486 Stalker2 25 7399 7.5 5.0 6.2 3.5 7473 chrX 11312013 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319486 intergenic not near genes chrX_25_11315001 chrX_11315001 RAL-301_125b 4362 chrX 11535002 11535028 chrX 11541522 11541548 Burdock 18 6519 12.5 9.5 11.0 1.5 6546 chrX 11535002 intron Drak + chrX 11538275 intron Drak + chrX 11541548 intron Drak + chrX_18_11535001 chrX_11535001 RAL-301_125b 4363 chrX 11535032 11535046 chrX 11541519 11541566 Burdock 5 6513 8.5 9.5 9.0 0.5 6534 chrX 11535032 intron Drak + chrX 11538299 intron Drak + chrX 11541566 intron Drak + chrX_5_11535001 chrX_11535001 RAL-301_125b 4364 chrX 11633372 11633435 chrX 11640476 11640539 297 28 7104 11.5 12.5 12.0 2.2 7167 chrX 11633372 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640539 intron Ptp10D + chrX_28_11635001 chrX_11635001 RAL-301_125b 4365 chrX 11645065 11645121 chrX 11648285 11648341 NOF 22 3220 13.5 10.5 12.0 1.7 3276 chrX 11645065 intron Ptp10D + chrX 11646703 intron Ptp10D + chrX 11648341 intron Ptp10D + chrX_22_11645001 chrX_11645001 RAL-301_125b 4366 chrX 11719833 11719886 chrX 11719963 11720016 15 130 12.0 8.5 10.2 1.3 183 chrX 11719833 3` UTR prtp + chrX 11719924 intergenic prtp +,Tango10 + chrX 11720016 intergenic prtp +,Tango10 + chrX_15_11715001 chrX_11715001 RAL-301_125b 4367 chrX 11804632 11804688 chrX 11804786 11804842 17 154 6.5 8.0 7.2 2.1 210 chrX 11804632 intron Hsc70-3 - chrX 11804737 intron Hsc70-3 - chrX 11804842 intron Hsc70-3 - chrX_17_11800001 chrX_11800001 RAL-301_125b 4368 chrX 11822173 11822210 chrX 11822362 11822399 14 189 4.0 11.0 7.5 1.6 226 chrX 11822173 intron rudhira + chrX 11822286 intron rudhira + chrX 11822399 intron rudhira + chrX_14_11820001 chrX_11820001 RAL-301_125b 4369 chrX 11922316 11922381 chrX 11922502 11922567 22 185 9.5 5.5 7.5 2.6 251 chrX 11922316 exon Sclp - chrX 11922442 intron Sclp - chrX 11922567 intron Sclp - chrX_22_11920001 chrX_11920001 RAL-301_125b 4370 chrX 12038038 12038106 chrX 12038282 12038350 20 242 4.5 8.0 6.2 2.8 312 chrX 12038038 intergenic not near genes chrX 12038194 intergenic not near genes chrX 12038350 intergenic not near genes chrX_20_12035001 chrX_12035001 RAL-301_125b 4371 chrX 12136418 12136491 chrX 12136549 12136617 5 129 0.0 6.0 3.0 1.2 199 chrX 12136418 intron Ten-a + chrX 12136518 intron Ten-a + chrX 12136617 intron Ten-a + chrX_5_12135001 chrX_12135001 RAL-301_125b 4372 chrX 12168101 12168141 chrX 12173593 12173622 I-element 15 5490 10.5 5.0 7.8 1.7 5521 chrX 12168101 intron Ten-a + chrX 12170862 intron Ten-a + chrX 12173622 intron Ten-a + chrX_15_12170001 chrX_12170001 RAL-301_125b 4373 chrX 12183979 12184027 chrX 12187046 12187079 12 3059 27.0 17.5 22.2 0.5 3100 chrX 12183979 intron Ten-a + chrX 12185529 intron Ten-a + chrX 12187079 intron Ten-a + chrX_12_12185001 chrX_12185001 RAL-301_125b 4374 chrX 12191512 12191578 chrX 12191650 12191716 23 137 6.0 6.5 6.2 3.2 204 chrX 12191512 intron Ten-a + chrX 12191614 intron Ten-a + chrX 12191716 intron Ten-a + chrX_23_12190001 chrX_12190001 RAL-301_125b 4375 chrX 12272794 12272852 chrX 12272923 12272981 18 129 6.0 3.5 4.8 3.1 187 chrX 12272794 intron Ten-a + chrX 12272888 intron Ten-a + chrX 12272981 intron Ten-a + chrX_18_12270001 chrX_12270001 RAL-301_125b 4376 chrX 12350728 12350784 chrX 12350859 12350924 19 131 9.5 0.0 4.8 3.3 196 chrX 12350728 intergenic not near genes chrX 12350826 intergenic not near genes chrX 12350924 intergenic not near genes chrX_19_12350001 chrX_12350001 RAL-301_125b 4377 chrX 12381846 12381904 chrX 12385798 12385800 flea 14 3931 4.0 13.5 8.8 1.4 3954 chrX 12381846 intergenic not near genes chrX 12383823 intergenic not near genes chrX 12385800 intergenic not near genes chrX_14_12380001 chrX_12380001 RAL-301_125b 4378 chrX 12442045 12442115 chrX 12442177 12442247 17 132 5.5 0.0 2.8 4.5 202 chrX 12442045 intron Pkcdelta + chrX 12442146 intron Pkcdelta + chrX 12442247 intron Pkcdelta + chrX_17_12440001 chrX_12440001 RAL-301_125b 4379 chrX 12506743 12506808 chrX 12506927 12506950 13 180 9.0 0.0 4.5 2.4 207 chrX 12506743 intron CG2556 + chrX 12506846 intron CG2556 + chrX 12506950 intron CG2556 + chrX_13_12505001 chrX_12505001 RAL-301_125b 4380 chrX 12511274 12511292 chrX 12511406 12511424 8 131 0.0 4.0 2.0 2.7 150 chrX 12511274 intron CG2556 + chrX 12511349 intron CG2556 + chrX 12511424 intron CG2556 + chrX_8_12510001 chrX_12510001 RAL-301_125b 4381 chrX 12511296 12511346 chrX 12511428 12511480 9 133 0.0 6.5 3.2 2.1 184 chrX 12511296 intron CG2556 + chrX 12511388 intron CG2556 + chrX 12511480 intron CG2556 + chrX_9_12510001 chrX_12510001 RAL-301_125b 4382 chrX 12557132 12557160 chrX 12557236 12557251 4 110 10.0 10.5 10.2 0.4 119 chrX 12557132 intron CG43921 - chrX 12557192 intron CG43921 - chrX 12557251 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-301_125b 4383 chrX 12635402 12635426 chrX 12635537 12635561 4 135 6.0 10.5 8.2 0.4 159 chrX 12635402 intron Tomosyn + chrX 12635482 intron Tomosyn + chrX 12635561 intron Tomosyn + chrX_4_12635001 chrX_12635001 RAL-301_125b 4384 chrX 12808432 12808476 chrX 12808574 12808617 12 140 8.0 9.5 8.8 1.2 185 chrX 12808432 intron Pde9 - chrX 12808524 intron Pde9 - chrX 12808617 intron Pde9 - chrX_12_12805001 chrX_12805001 RAL-301_125b 4385 chrX 12864917 12864995 chrX 12865047 12865125 21 130 4.5 3.0 3.8 4.4 208 chrX 12864917 intron Pde9 - chrX 12865021 intron Pde9 - chrX 12865125 intron Pde9 - chrX_21_12865001 chrX_12865001 RAL-301_125b 4386 chrX 12930546 12930600 chrX 12937712 12937766 HMS-Beagle 12 7166 6.0 13.0 9.5 1.1 7220 chrX 12930546 intron fne + chrX 12934156 intron fne + chrX 12937766 intron fne + chrX_12_12930001 chrX_12930001 RAL-301_125b 4387 chrX 12937929 12937944 chrX 12938062 12938077 7 133 0.0 8.5 4.2 1.3 148 chrX 12937929 intron fne + chrX 12938003 intron fne + chrX 12938077 intron fne + chrX_7_12935001 chrX_12935001 RAL-301_125b 4388 chrX 12953842 12953915 chrX 12954030 12954104 14 188 5.0 4.0 4.5 2.5 262 chrX 12953842 intron hec - chrX 12953973 intron hec - chrX 12954104 intron hec - chrX_14_12950001 chrX_12950001 RAL-301_125b 4389 chrX 12977022 12977063 chrX 12977148 12977189 9 126 1.5 14.5 8.0 1.0 167 chrX 12977022 intergenic not near genes chrX 12977106 intergenic not near genes chrX 12977189 intergenic not near genes chrX_9_12975001 chrX_12975001 RAL-301_125b 4390 chrX 13008313 13008371 chrX 13008602 13008660 24 289 7.5 7.0 7.2 2.9 347 chrX 13008313 intron rad + chrX 13008486 intron rad + chrX 13008660 intron rad + chrX_24_13005001 chrX_13005001 RAL-301_125b 4391 chrX 13061303 13061375 chrX 13061465 13061536 13 161 6.5 6.5 6.5 1.7 233 chrX 13061303 intron rad + chrX 13061420 intron rad + chrX 13061536 intron rad + chrX_13_13060001 chrX_13060001 RAL-301_125b 4392 chrX 13146554 13146622 chrX 13146692 13146760 25 138 5.5 6.0 5.8 3.7 206 chrX 13146554 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146760 intron CG32645 + chrX_25_13145001 chrX_13145001 RAL-301_125b 4393 chrX 13236830 13236902 chrX 13236962 13237037 13 132 1.0 6.5 3.8 2.7 207 chrX 13236830 intron mew - chrX 13236934 intron mew - chrX 13237037 intron mew - chrX_13_13235001 chrX_13235001 RAL-301_125b 4394 chrX 13272129 13272181 chrX 13272256 13272308 22 126 9.5 9.5 9.5 2.1 179 chrX 13272129 intron HDAC4 - chrX 13272218 intron HDAC4 - chrX 13272308 intron HDAC4 - chrX_22_13270001 chrX_13270001 RAL-301_125b 4395 chrX 13329262 13329361 chrX 13329411 13329497 7 145 0.0 0.0 0.0 7.0 235 chrX 13329262 3` UTR IP3K2 + chrX 13329380 intergenic IP3K2 +,Jafrac1 + chrX 13329497 intergenic IP3K2 +,Jafrac1 + chrX_7_13325001 chrX_13325001 RAL-301_125b 4396 chrX 13374795 13374863 chrX 13374925 13374993 23 129 6.0 8.5 7.2 2.8 198 chrX 13374795 intron CG1640 + chrX 13374894 intron CG1640 + chrX 13374993 intron CG1640 + chrX_23_13370001 chrX_13370001 RAL-301_125b 4397 chrX 13401436 13401509 chrX 13401838 13401911 jockey 20 401 5.0 7.0 6.0 2.9 475 chrX 13401436 intergenic CG1673 +,CG12725 - chrX 13401674 intergenic CG12725 -,CG1673 + chrX 13401911 3` UTR CG12725 - chrX_20_13400001 chrX_13400001 RAL-301_125b 4398 chrX 13429423 13429481 chrX 13430622 13430680 jockey 20 1198 10.0 8.0 9.0 2.0 1257 chrX 13429423 intergenic not near genes chrX 13430052 intergenic not near genes chrX 13430680 intergenic not near genes chrX_20_13430001 chrX_13430001 RAL-301_125b 4399 chrX 13443364 13443413 chrX 13443491 13443540 11 124 6.5 9.5 8.0 1.2 176 chrX 13443364 intergenic not near genes chrX 13443452 intergenic not near genes chrX 13443540 intergenic not near genes chrX_11_13440001 chrX_13440001 RAL-301_125b 4400 chrX 13463602 13463666 chrX 13469229 13469293 mdg3 21 5626 6.5 9.5 8.0 2.3 5691 chrX 13463602 intron Neto + chrX 13466448 intron Neto + chrX 13469293 intron Neto + chrX_21_13465001 chrX_13465001 RAL-301_125b 4401 chrX 13513364 13513399 chrX 13513452 13513508 10 108 8.5 9.5 9.0 1.0 144 chrX 13513364 intron Neto + chrX 13513436 intron Neto + chrX 13513508 intron Neto + chrX_10_13510001 chrX_13510001 RAL-301_125b 4402 chrX 13550438 13550482 chrX 13550570 13550614 13 132 3.0 0.0 1.5 5.2 176 chrX 13550438 intergenic not near genes chrX 13550526 intergenic not near genes chrX 13550614 intergenic not near genes chrX_13_13550001 chrX_13550001 RAL-301_125b 4403 chrX 13628395 13628465 chrX 13628529 13628599 20 134 6.5 5.0 5.8 2.9 204 chrX 13628395 intron NFAT + chrX 13628497 intron NFAT + chrX 13628599 intron NFAT + chrX_20_13625001 chrX_13625001 RAL-301_125b 4404 chrX 13754377 13754461 chrX 13754523 13754603 32 139 5.0 9.0 7.0 4.0 226 chrX 13754377 intron Pdcd4 - chrX 13754490 intron Pdcd4 - chrX 13754603 intron Pdcd4 - chrX_32_13750001 chrX_13750001 RAL-301_125b 4405 chrX 13791113 13791149 chrX 13791314 13791350 9 201 12.5 0.0 6.2 1.2 237 chrX 13791113 intron inaE + chrX 13791232 intron inaE + chrX 13791350 intron inaE + chrX_9_13790001 chrX_13790001 RAL-301_125b 4406 chrX 13795497 13795603 chrX 13798793 13798928 7 3300 14.0 20.5 17.2 0.4 3431 chrX 13795497 intron inaE + chrX 13797212 intron,exon inaE +,CG10996 - chrX 13798928 intron inaE + chrX_7_13795001 chrX_13795001 RAL-301_125b 4407 chrX 13796045 13796069 chrX 13799551 13799575 10 3506 4.5 17.5 11.0 0.8 3530 chrX 13796045 intron inaE + chrX 13797810 intron inaE + chrX 13799575 intron inaE + chrX_10_13795001 chrX_13795001 RAL-301_125b 4408 chrX 13937935 13937941 chrX 13941256 13941262 I-element 4 3321 11.0 9.0 10.0 0.4 3327 chrX 13937935 intron mamo - chrX 13939598 intron mamo - chrX 13941262 intron mamo - chrX_4_13935001 chrX_13935001 RAL-301_125b 4409 chrX 13937942 13937997 chrX 13941253 13941303 I-element 25 3319 5.0 9.0 7.0 3.1 3361 chrX 13937942 intron mamo - chrX 13939622 intron mamo - chrX 13941303 intron mamo - chrX_25_13935001 chrX_13935001 RAL-301_125b 4410 chrX 13943275 13943300 chrX 13943416 13943441 7 141 0.0 13.0 6.5 0.9 166 chrX 13943275 intron mamo - chrX 13943358 intron mamo - chrX 13943441 intron mamo - chrX_7_13940001 chrX_13940001 RAL-301_125b 4411 chrX 13975875 13975899 chrX 13976002 13976026 13 127 0.5 14.0 7.2 1.6 151 chrX 13975875 intron mamo - chrX 13975950 intron mamo - chrX 13976026 intron mamo - chrX_13_13975001 chrX_13975001 RAL-301_125b 4412 chrX 14030701 14030777 chrX 14035337 14035413 copia 10 4636 5.5 7.5 6.5 1.3 4712 chrX 14030701 intergenic not near genes chrX 14033057 intergenic not near genes chrX 14035413 intergenic not near genes chrX_10_14030001 chrX_14030001 RAL-301_125b 4413 chrX 14104984 14105051 chrX 14114185 14114237 roo 17 9197 5.0 8.0 6.5 2.3 9253 chrX 14104984 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114237 5` UTR CR44657 + chrX_17_14105001 chrX_14105001 RAL-301_125b 4414 chrX 14157549 14157612 chrX 14163256 14163319 297 9 5707 10.0 8.0 9.0 0.9 5770 chrX 14157549 intergenic not near genes chrX 14160434 intergenic not near genes chrX 14163319 intergenic not near genes chrX_9_14160001 chrX_14160001 RAL-301_125b 4415 chrX 14304038 14304062 chrX 14310306 14310330 17.6 11 6268 11.0 9.0 10.0 1.0 6292 chrX 14304038 intergenic not near genes chrX 14307184 intergenic not near genes chrX 14310330 intergenic not near genes chrX_11_14305001 chrX_14305001 RAL-301_125b 4416 chrX 14331699 14331772 chrX 14331834 14331907 17 124 5.0 2.0 3.5 3.8 208 chrX 14331699 intron dpr8 + chrX 14331803 intron dpr8 + chrX 14331907 intron dpr8 + chrX_17_14330001 chrX_14330001 RAL-301_125b 4417 chrX 14340271 14340302 chrX 14340378 14340446 5 130 6.0 5.5 5.8 0.7 175 chrX 14340271 intron dpr8 + chrX 14340358 intron dpr8 + chrX 14340446 intron dpr8 + chrX_5_14340001 chrX_14340001 RAL-301_125b 4418 chrX 14353394 14353464 chrX 14353527 14353597 11 130 6.5 4.5 5.5 1.7 203 chrX 14353394 intron dpr8 + chrX 14353496 intron dpr8 + chrX 14353597 intron dpr8 + chrX_11_14350001 chrX_14350001 RAL-301_125b 4419 chrX 14381363 14381411 chrX 14381567 14381615 19 204 3.0 6.0 4.5 3.5 252 chrX 14381363 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381489 intron dpr8 + chrX 14381615 intron dpr8 + chrX_19_14380001 chrX_14380001 RAL-301_125b 4420 chrX 14383915 14383947 chrX 14384049 14384081 10 133 9.0 14.0 11.5 0.8 166 chrX 14383915 intron dpr8 + chrX 14383998 intron dpr8 + chrX 14384081 intron dpr8 + chrX_10_14380001 chrX_14380001 RAL-301_125b 4421 chrX 14401504 14401568 chrX 14401663 14401726 18 158 5.5 5.5 5.5 2.8 222 chrX 14401504 intron dpr8 + chrX 14401615 intron dpr8 + chrX 14401726 intron dpr8 + chrX_18_14400001 chrX_14400001 RAL-301_125b 4422 chrX 14411972 14411990 chrX 14412102 14412121 7 129 8.0 14.5 11.2 0.6 149 chrX 14411972 intron dpr8 + chrX 14412046 intron dpr8 + chrX 14412121 intron dpr8 + chrX_7_14410001 chrX_14410001 RAL-301_125b 4423 chrX 14416266 14416316 chrX 14421084 14421134 F-element 16 4818 11.5 9.5 10.5 1.4 4868 chrX 14416266 intron dpr8 + chrX 14418700 intron dpr8 + chrX 14421134 intron dpr8 + chrX_16_14415001 chrX_14415001 RAL-301_125b 4424 chrX 14528637 14528715 chrX 14528780 14528858 26 143 5.0 7.0 6.0 3.7 221 chrX 14528637 intergenic not near genes chrX 14528748 intergenic not near genes chrX 14528858 intergenic not near genes chrX_26_14525001 chrX_14525001 RAL-301_125b 4425 chrX 14551626 14551674 chrX 14559339 14559346 opus 4 7703 5.5 7.5 6.5 0.5 7720 chrX 14551626 intergenic not near genes chrX 14555486 intergenic not near genes chrX 14559346 intergenic not near genes chrX_4_14555001 chrX_14555001 RAL-301_125b 4426 chrX 14570025 14570108 chrX 14570157 14570239 15 132 5.0 0.5 2.8 3.9 214 chrX 14570025 intergenic not near genes chrX 14570132 intergenic not near genes chrX 14570239 intergenic not near genes chrX_15_14570001 chrX_14570001 RAL-301_125b 4427 chrX 14571141 14571187 chrX 14571273 14571317 5 123 9.5 5.5 7.5 0.6 176 chrX 14571141 intergenic not near genes chrX 14571229 intergenic not near genes chrX 14571317 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-301_125b 4428 chrX 14636424 14636441 chrX 14641915 14641932 I-element 8 5491 19.0 10.5 14.8 0.5 5508 chrX 14636424 intron NetA - chrX 14639178 intron NetA - chrX 14641932 intron NetA - chrX_8_14635001 chrX_14635001 RAL-301_125b 4429 chrX 14636447 14636485 chrX 14641913 14641976 I-element 17 5489 8.0 10.5 9.2 1.7 5529 chrX 14636447 intron NetA - chrX 14639212 intron NetA - chrX 14641976 intron NetA - chrX_17_14635001 chrX_14635001 RAL-301_125b 4430 chrX 14677291 14677358 chrX 14677426 14677487 25 134 8.0 5.0 6.5 3.3 196 chrX 14677291 intergenic not near genes chrX 14677389 intergenic not near genes chrX 14677487 intergenic not near genes chrX_25_14675001 chrX_14675001 RAL-301_125b 4431 chrX 14713992 14714065 chrX 14714124 14714197 26 132 6.0 5.5 5.8 3.8 205 chrX 14713992 intron NetB - chrX 14714094 intron NetB - chrX 14714197 intron NetB - chrX_26_14710001 chrX_14710001 RAL-301_125b 4432 chrX 14777992 14778049 chrX 14782839 14782896 Doc 22 4846 7.5 17.0 12.2 1.7 4904 chrX 14777992 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782896 intergenic Ag5r2 - chrX_22_14780001 chrX_14780001 RAL-301_125b 4433 chrX 14813691 14813765 chrX 14813819 14813893 19 128 3.5 4.0 3.8 4.0 202 chrX 14813691 intron rut - chrX 14813792 intron rut - chrX 14813893 intron rut - chrX_19_14810001 chrX_14810001 RAL-301_125b 4434 chrX 14818731 14818792 chrX 14823968 14824034 copia 22 5251 6.0 6.5 6.2 3.1 5303 chrX 14818731 intron rut - chrX 14821382 intron rut - chrX 14824034 intron rut - chrX_22_14820001 chrX_14820001 RAL-301_125b 4435 chrX 14936825 14936878 chrX 14946132 14946185 roo 34 9307 10.5 12.0 11.2 2.8 9360 chrX 14936825 intron pdgy - chrX 14941505 intron pdgy - chrX 14946185 intron pdgy - chrX_34_14940001 chrX_14940001 RAL-301_125b 4436 chrX 14968029 14968097 chrX 14968158 14968226 30 129 0.0 7.5 3.8 6.2 197 chrX 14968029 intron eag + chrX 14968128 intron eag + chrX 14968226 intron eag + chrX_30_14965001 chrX_14965001 RAL-301_125b 4437 chrX 14981680 14981738 chrX 14981809 14981867 15 129 6.5 9.0 7.8 1.7 187 chrX 14981680 intron eag + chrX 14981774 intron eag + chrX 14981867 intron eag + chrX_15_14980001 chrX_14980001 RAL-301_125b 4438 chrX 15017939 15017963 chrX 15018103 15018127 INE-1 9 164 5.5 6.5 6.0 1.3 188 chrX 15017939 exon hiw - chrX 15018033 intron hiw - chrX 15018127 exon hiw - chrX_9_15015001 chrX_15015001 RAL-301_125b 4439 chrX 15059123 15059197 chrX 15059279 15059353 22 155 7.5 8.5 8.0 2.4 230 chrX 15059123 exon hiw - chrX 15059238 intron hiw - chrX 15059353 exon hiw - chrX_22_15055001 chrX_15055001 RAL-301_125b 4440 chrX 15081565 15081626 chrX 15081734 15081810 20 176 10.0 5.5 7.8 2.3 245 chrX 15081565 exon CG33177 + chrX 15081688 exon CG33177 + chrX 15081810 intron CG33177 + chrX_20_15080001 chrX_15080001 RAL-301_125b 4441 chrX 15149487 15149549 chrX 15149615 15149677 27 128 6.0 6.0 6.0 3.9 190 chrX 15149487 intron CG9095 - chrX 15149582 intron CG9095 - chrX 15149677 intron CG9095 - chrX_27_15145001 chrX_15145001 RAL-301_125b 4442 chrX 15156923 15156979 chrX 15157386 15157429 18 458 6.0 11.0 8.5 1.9 506 chrX 15156923 intron CG9095 - chrX 15157176 intron CG9095 - chrX 15157429 intron CG9095 - chrX_18_15155001 chrX_15155001 RAL-301_125b 4443 chrX 15247942 15248239 chrX 15248070 15248365 4 126 7.0 13.5 10.2 0.4 423 chrX 15247942 intergenic not near genes chrX 15248154 intergenic not near genes chrX 15248365 intergenic not near genes chrX_4_15245001 chrX_15245001 RAL-301_125b 4444 chrX 15248244 15248276 chrX 15248370 15248402 7 126 2.5 13.5 8.0 0.8 158 chrX 15248244 intergenic not near genes chrX 15248323 intergenic not near genes chrX 15248402 intergenic not near genes chrX_7_15245001 chrX_15245001 RAL-301_125b 4445 chrX 15265827 15265868 chrX 15265960 15266001 12 132 8.5 5.0 6.8 1.5 174 chrX 15265827 intergenic not near genes chrX 15265914 intergenic not near genes chrX 15266001 intergenic not near genes chrX_12_15265001 chrX_15265001 RAL-301_125b 4446 chrX 15273664 15273689 chrX 15274881 15274906 1360 10 1215 18.0 11.5 14.8 0.6 1242 chrX 15273664 intergenic not near genes chrX 15274285 intergenic not near genes chrX 15274906 intergenic not near genes chrX_10_15270001 chrX_15270001 RAL-301_125b 4447 chrX 15273696 15273729 chrX 15274871 15274938 1360 14 1204 8.5 9.0 8.8 1.4 1242 chrX 15273696 intergenic not near genes chrX 15274317 intergenic not near genes chrX 15274938 intergenic not near genes chrX_14_15270001 chrX_15270001 RAL-301_125b 4448 chrX 15277018 15277093 chrX 15277331 15277406 18 308 5.5 4.5 5.0 3.0 388 chrX 15277018 intergenic not near genes chrX 15277212 intergenic not near genes chrX 15277406 intergenic not near genes chrX_18_15275001 chrX_15275001 RAL-301_125b 4449 chrX 15287563 15287598 chrX 15287698 15287733 8 135 0.0 0.0 0.0 8.0 170 chrX 15287563 intergenic not near genes chrX 15287648 intergenic not near genes chrX 15287733 intergenic not near genes chrX_8_15285001 chrX_15285001 RAL-301_125b 4450 chrX 15326689 15326717 chrX 15326937 15326965 I-element 12 248 3.5 8.0 5.8 1.8 276 chrX 15326689 3` UTR Top1 + chrX 15326827 3` UTR Top1 + chrX 15326965 3` UTR Top1 + chrX_12_15325001 chrX_15325001 RAL-301_125b 4451 chrX 15369791 15369855 chrX 15369924 15369988 14 133 6.5 12.0 9.2 1.4 197 chrX 15369791 intron acj6 - chrX 15369890 intron acj6 - chrX 15369988 intron acj6 - chrX_14_15365001 chrX_15365001 RAL-301_125b 4452 chrX 15413016 15413069 chrX 15417368 15417421 Juan 16 4351 9.5 6.5 8.0 1.8 4405 chrX 15413016 intron Cngl - chrX 15415218 intron Cngl - chrX 15417421 intron Cngl - chrX_16_15415001 chrX_15415001 RAL-301_125b 4453 chrX 15426134 15426199 chrX 15426280 15426345 21 146 4.5 3.5 4.0 4.2 211 chrX 15426134 intron Cngl - chrX 15426240 intron Cngl - chrX 15426345 intron Cngl - chrX_21_15425001 chrX_15425001 RAL-301_125b 4454 chrX 15429190 15429257 chrX 15429319 15429389 21 132 6.0 3.5 4.8 3.6 199 chrX 15429190 intron Cngl - chrX 15429290 intron Cngl - chrX 15429389 intron Cngl - chrX_21_15425001 chrX_15425001 RAL-301_125b 4455 chrX 15543230 15543255 chrX 15543356 15543387 7 130 20.5 1.0 10.8 0.6 157 chrX 15543230 intron Ac13E - chrX 15543308 intron Ac13E - chrX 15543387 intron Ac13E - chrX_7_15540001 chrX_15540001 RAL-301_125b 4456 chrX 15543261 15543284 chrX 15543354 15543404 12 120 13.5 1.0 7.2 1.5 143 chrX 15543261 intron Ac13E - chrX 15543332 intron Ac13E - chrX 15543404 intron Ac13E - chrX_12_15540001 chrX_15540001 RAL-301_125b 4457 chrX 15591183 15591198 chrX 15591309 15591324 8 126 1.0 19.5 10.2 0.7 141 chrX 15591183 intron CG9220 - chrX 15591254 intron CG9220 - chrX 15591324 intron CG9220 - chrX_8_15590001 chrX_15590001 RAL-301_125b 4458 chrX 15634129 15634180 chrX 15634603 15634654 12 474 4.5 9.5 7.0 1.5 525 chrX 15634129 intergenic not near genes chrX 15634392 intergenic not near genes chrX 15634654 intergenic not near genes chrX_12_15630001 chrX_15630001 RAL-301_125b 4459 chrX 15653646 15653724 chrX 15653798 15653875 20 152 4.0 5.5 4.8 3.4 229 chrX 15653646 intergenic not near genes chrX 15653760 intergenic not near genes chrX 15653875 intergenic not near genes chrX_20_15650001 chrX_15650001 RAL-301_125b 4460 chrX 15671153 15671209 chrX 15671290 15671341 15 135 6.5 1.5 4.0 3.0 188 chrX 15671153 intergenic CG15646 - chrX 15671247 intergenic CG15646 - chrX 15671341 intergenic CG15646 - chrX_15_15670001 chrX_15670001 RAL-301_125b 4461 chrX 15677987 15678065 chrX 15678115 15678192 24 126 8.5 7.5 8.0 2.7 205 chrX 15677987 intergenic CG12708 + chrX 15678090 intergenic CG12708 + chrX 15678192 intergenic CG12708 + chrX_24_15675001 chrX_15675001 RAL-301_125b 4462 chrX 15721332 15721347 chrX 15721459 15721487 6 138 7.5 6.5 7.0 0.8 155 chrX 15721332 exon CG8184 + chrX 15721410 intron CG8184 + chrX 15721487 intron CG8184 + chrX_6_15720001 chrX_15720001 RAL-301_125b 4463 chrX 15721349 15721386 chrX 15721454 15721526 17 132 4.5 6.5 5.5 2.6 177 chrX 15721349 exon CG8184 + chrX 15721438 intron CG8184 + chrX 15721526 intron CG8184 + chrX_17_15720001 chrX_15720001 RAL-301_125b 4464 chrX 15817553 15817607 chrX 15817771 15817825 22 217 8.0 13.0 10.5 1.9 272 chrX 15817553 intron sd + chrX 15817689 intron sd + chrX 15817825 intron sd + chrX_22_15815001 chrX_15815001 RAL-301_125b 4465 chrX 15952188 15952248 chrX 15952319 15952379 20 131 7.0 7.5 7.2 2.4 191 chrX 15952188 intron mmd - chrX 15952284 intron mmd - chrX 15952379 intron mmd - chrX_20_15950001 chrX_15950001 RAL-301_125b 4466 chrX 15970874 15970910 chrX 15971002 15971036 8 128 2.5 5.5 4.0 1.6 162 chrX 15970874 intron mmd - chrX 15970955 intron mmd - chrX 15971036 intron mmd - chrX_8_15970001 chrX_15970001 RAL-301_125b 4467 chrX 16059636 16059686 chrX 16059763 16059813 13 126 4.5 5.5 5.0 2.2 177 chrX 16059636 exon Muc14A + chrX 16059724 exon Muc14A + chrX 16059813 exon Muc14A + chrX_13_16055001 chrX_16055001 RAL-301_125b 4468 chrX 16074104 16074163 chrX 16074490 16074549 19 386 0.0 9.0 4.5 3.5 445 chrX 16074104 intergenic not near genes chrX 16074326 intergenic Tob - chrX 16074549 intergenic Tob - chrX_19_16070001 chrX_16070001 RAL-301_125b 4469 chrX 16100514 16100589 chrX 16100643 16100719 15 128 5.0 6.5 5.8 2.2 205 chrX 16100514 intron,intron CG42353 -,CG42354 - chrX 16100616 intron,intron CG42353 -,CG42354 - chrX 16100719 intron,intron CG42353 -,CG42354 - chrX_15_16100001 chrX_16100001 RAL-301_125b 4470 chrX 16109226 16109235 chrX 16109334 16109368 5 123 8.0 21.5 14.8 0.3 142 chrX 16109226 intergenic not near genes chrX 16109297 intergenic not near genes chrX 16109368 intergenic not near genes chrX_5_16105001 chrX_16105001 RAL-301_125b 4471 chrX 16110551 16110617 chrX 16110694 16110750 30 142 9.5 7.5 8.5 3.2 199 chrX 16110551 intergenic not near genes chrX 16110650 intergenic not near genes chrX 16110750 intergenic not near genes chrX_30_16110001 chrX_16110001 RAL-301_125b 4472 chrX 16115258 16115274 chrX 16115386 16115402 10 128 18.5 14.5 16.5 0.6 144 chrX 16115258 intergenic not near genes chrX 16115330 intergenic not near genes chrX 16115402 intergenic not near genes chrX_10_16115001 chrX_16115001 RAL-301_125b 4473 chrX 16154857 16154908 chrX 16154991 16155028 16 131 11.5 5.0 8.2 1.7 171 chrX 16154857 intergenic not near genes chrX 16154942 intergenic not near genes chrX 16155028 intergenic not near genes chrX_16_16150001 chrX_16150001 RAL-301_125b 4474 chrX 16160248 16160300 chrX 16160374 16160426 8 126 7.5 6.5 7.0 1.0 178 chrX 16160248 intergenic not near genes chrX 16160337 intergenic not near genes chrX 16160426 intergenic not near genes chrX_8_16160001 chrX_16160001 RAL-301_125b 4475 chrX 16162122 16162196 chrX 16162351 16162425 29 225 8.0 7.5 7.8 3.3 303 chrX 16162122 intergenic not near genes chrX 16162274 intergenic not near genes chrX 16162425 intergenic not near genes chrX_29_16160001 chrX_16160001 RAL-301_125b 4476 chrX 16218547 16218614 chrX 16218914 16218981 25 365 9.5 4.0 6.8 3.2 434 chrX 16218547 intergenic not near genes chrX 16218764 intergenic not near genes chrX 16218981 intergenic not near genes chrX_25_16215001 chrX_16215001 RAL-301_125b 4477 chrX 16222742 16222806 chrX 16231142 16231206 roo 22 8400 0.0 12.0 6.0 3.1 8464 chrX 16222742 intergenic not near genes chrX 16226974 intergenic not near genes chrX 16231206 intergenic not near genes chrX_22_16225001 chrX_16225001 RAL-301_125b 4478 chrX 16245904 16245960 chrX 16246061 16246117 INE-1 30 156 10.0 0.0 5.0 5.0 213 chrX 16245904 intergenic not near genes chrX 16246010 intergenic not near genes chrX 16246117 intergenic not near genes chrX_30_16245001 chrX_16245001 RAL-301_125b 4479 chrX 16265855 16265860 chrX 16265983 16265988 4 128 8.0 0.0 4.0 0.8 133 chrX 16265855 intron CG12507 - chrX 16265922 intron CG12507 - chrX 16265988 intron CG12507 - chrX_4_16265001 chrX_16265001 RAL-301_125b 4480 chrX 16295484 16295556 chrX 16295618 16295684 21 132 6.5 0.0 3.2 5.0 200 chrX 16295484 intron CG9911 - chrX 16295584 intron CG9911 - chrX 16295684 intron CG9911 - chrX_21_16295001 chrX_16295001 RAL-301_125b 4481 chrX 16329375 16329444 chrX 16329504 16329577 20 129 0.5 4.5 2.5 5.7 202 chrX 16329375 intron CG9919 - chrX 16329476 intron CG9919 - chrX 16329577 exon CG9919 - chrX_20_16325001 chrX_16325001 RAL-301_125b 4482 chrX 16340619 16340693 chrX 16349824 16349900 roo 25 9205 0.0 7.5 3.8 5.2 9281 chrX 16340619 3` UTR Dsp1 + chrX 16345260 intergenic not near genes chrX 16349900 intergenic sl + chrX_25_16345001 chrX_16345001 RAL-301_125b 4483 chrX 16408080 16408110 chrX 16408207 16408214 10 124 13.5 17.0 15.2 0.6 134 chrX 16408080 intron CG4301 + chrX 16408147 intron CG4301 + chrX 16408214 intron CG4301 + chrX_10_16405001 chrX_16405001 RAL-301_125b 4484 chrX 16492602 16492677 chrX 16498229 16498282 mdg3 27 5626 8.0 7.0 7.5 3.2 5680 chrX 16492602 intron para - chrX 16495442 intron para - chrX 16498282 exon para - chrX_27_16495001 chrX_16495001 RAL-301_125b 4485 chrX 16529351 16529437 chrX 16529520 16529598 16 166 0.0 7.0 3.5 3.6 247 chrX 16529351 intron para - chrX 16529474 intron para - chrX 16529598 intron para - chrX_16_16525001 chrX_16525001 RAL-301_125b 4486 chrX 16569665 16569673 chrX 16569796 16569804 5 131 9.5 15.0 12.2 0.4 139 chrX 16569665 intron CanA-14F - chrX 16569734 intron CanA-14F - chrX 16569804 intron CanA-14F - chrX_5_16565001 chrX_16565001 RAL-301_125b 4487 chrX 16762543 16762595 chrX 16762728 16762794 11 196 4.5 0.0 2.2 3.4 251 chrX 16762543 intron if - chrX 16762668 intron if - chrX 16762794 intron if - chrX_11_16760001 chrX_16760001 RAL-301_125b 4488 chrX 16764690 16764707 chrX 16764817 16764834 6 127 17.0 3.0 10.0 0.5 144 chrX 16764690 intron if - chrX 16764762 intron if - chrX 16764834 intron if - chrX_6_16760001 chrX_16760001 RAL-301_125b 4489 chrX 16821188 16821261 chrX 16821318 16821391 38 129 4.5 9.5 7.0 4.8 203 chrX 16821188 intron CG4829 + chrX 16821290 intron CG4829 + chrX 16821391 intron CG4829 + chrX_38_16820001 chrX_16820001 RAL-301_125b 4490 chrX 16833159 16833172 chrX 16833294 16833307 7 133 22.0 3.5 12.8 0.5 148 chrX 16833159 intron CG13004 - chrX 16833233 intron CG13004 - chrX 16833307 intron CG13004 - chrX_7_16830001 chrX_16830001 RAL-301_125b 4491 chrX 16833173 16833224 chrX 16833289 16833359 12 133 12.0 5.0 8.5 1.3 186 chrX 16833173 intron CG13004 - chrX 16833266 intron CG13004 - chrX 16833359 intron CG13004 - chrX_12_16830001 chrX_16830001 RAL-301_125b 4492 chrX 16870030 16870098 chrX 16870162 16870231 15 132 4.5 5.5 5.0 2.5 201 chrX 16870030 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870231 intron CG13003 - chrX_15_16870001 chrX_16870001 RAL-301_125b 4493 chrX 16873991 16874004 chrX 16874117 16874130 6 126 9.5 6.0 7.8 0.7 139 chrX 16873991 intron CG13003 - chrX 16874060 intron CG13003 - chrX 16874130 intron CG13003 - chrX_6_16870001 chrX_16870001 RAL-301_125b 4494 chrX 16880119 16880159 chrX 16880260 16880300 7 141 11.0 12.0 11.5 0.6 181 chrX 16880119 intergenic not near genes chrX 16880210 intergenic not near genes chrX 16880300 intergenic not near genes chrX_7_16880001 chrX_16880001 RAL-301_125b 4495 chrX 16891314 16891357 chrX 16891451 16891494 14 137 7.0 8.0 7.5 1.6 180 chrX 16891314 intergenic not near genes chrX 16891404 intergenic not near genes chrX 16891494 intergenic not near genes chrX_14_16890001 chrX_16890001 RAL-301_125b 4496 chrX 16898049 16898114 chrX 16898179 16898243 11 126 5.5 4.5 5.0 1.8 194 chrX 16898049 intergenic not near genes chrX 16898146 intergenic not near genes chrX 16898243 intergenic not near genes chrX_11_16895001 chrX_16895001 RAL-301_125b 4497 chrX 16906599 16906674 chrX 16906736 16906811 34 137 0.0 9.5 4.8 5.9 212 chrX 16906599 intron CR44754 - chrX 16906705 intron CR44754 - chrX 16906811 intron CR44754 - chrX_34_16905001 chrX_16905001 RAL-301_125b 4498 chrX 16935961 16936024 chrX 16936429 16936492 jockey 8 468 9.0 6.0 7.5 0.9 531 chrX 16935961 intron CG4928 + chrX 16936226 intron CG4928 + chrX 16936492 intron CG4928 + chrX_8_16935001 chrX_16935001 RAL-301_125b 4499 chrX 17011926 17011994 chrX 17012059 17012127 23 132 6.0 8.0 7.0 2.9 201 chrX 17011926 intron CG45002 - chrX 17012026 intron CG45002 - chrX 17012127 intron CG45002 - chrX_23_17010001 chrX_17010001 RAL-301_125b 4500 chrX 17057893 17057910 chrX 17058184 17058201 pogo 6 291 11.5 6.5 9.0 0.6 308 chrX 17057893 intron CG45002 - chrX 17058047 intron CG45002 - chrX 17058201 intron CG45002 - chrX_6_17055001 chrX_17055001 RAL-301_125b 4501 chrX 17057914 17057945 chrX 17058183 17058236 pogo 9 289 11.5 6.5 9.0 0.9 322 chrX 17057914 intron CG45002 - chrX 17058075 intron CG45002 - chrX 17058236 intron CG45002 - chrX_9_17055001 chrX_17055001 RAL-301_125b 4502 chrX 17057947 17057955 chrX 17058176 17058246 pogo 4 276 11.5 6.0 8.8 0.4 299 chrX 17057947 intron CG45002 - chrX 17058096 intron CG45002 - chrX 17058246 intron CG45002 - chrX_4_17055001 chrX_17055001 RAL-301_125b 4503 chrX 17063143 17063162 chrX 17063280 17063299 8 137 14.5 10.5 12.5 0.6 156 chrX 17063143 intron CG45002 - chrX 17063221 intron CG45002 - chrX 17063299 intron CG45002 - chrX_8_17060001 chrX_17060001 RAL-301_125b 4504 chrX 17063164 17063199 chrX 17063274 17063336 12 134 8.5 9.5 9.0 1.2 172 chrX 17063164 intron CG45002 - chrX 17063250 intron CG45002 - chrX 17063336 intron CG45002 - chrX_12_17060001 chrX_17060001 RAL-301_125b 4505 chrX 17088134 17088194 chrX 17088777 17088837 6 643 4.0 9.5 6.8 0.8 703 chrX 17088134 intergenic CG8945 - chrX 17088486 intergenic not near genes chrX 17088837 intergenic not near genes chrX_6_17085001 chrX_17085001 RAL-301_125b 4506 chrX 17195171 17195226 chrX 17200307 17200362 flea 19 5136 8.5 8.5 8.5 2.0 5191 chrX 17195171 3` UTR baz + chrX 17197766 3` UTR baz + chrX 17200362 3` UTR baz + chrX_19_17195001 chrX_17195001 RAL-301_125b 4507 chrX 17205809 17205856 chrX 17205949 17205996 20 140 6.0 13.5 9.8 1.9 187 chrX 17205809 intergenic not near genes chrX 17205902 intergenic not near genes chrX 17205996 intergenic CG32564 + chrX_20_17205001 chrX_17205001 RAL-301_125b 4508 chrX 17229906 17229963 chrX 17230059 17230116 16 153 8.5 6.5 7.5 1.9 210 chrX 17229906 intergenic CG10597 - chrX 17230011 intergenic CG10597 - chrX 17230116 intergenic CG10597 - chrX_16_17230001 chrX_17230001 RAL-301_125b 4509 chrX 17237482 17237531 chrX 17237616 17237665 15 134 4.5 8.5 6.5 2.0 183 chrX 17237482 intron f + chrX 17237574 intron f + chrX 17237665 intron f + chrX_15_17235001 chrX_17235001 RAL-301_125b 4510 chrX 17273806 17273841 chrX 17273947 17273981 9 141 3.5 6.5 5.0 1.5 175 chrX 17273806 exon f + chrX 17273894 intron f + chrX 17273981 intron f + chrX_9_17270001 chrX_17270001 RAL-301_125b 4511 chrX 17282842 17282898 chrX 17282960 17282974 6 110 8.5 1.5 5.0 1.0 132 chrX 17282842 5` UTR CG5445 + chrX 17282908 5` UTR CG5445 + chrX 17282974 5` UTR CG5445 + chrX_6_17280001 chrX_17280001 RAL-301_125b 4512 chrX 17290023 17290090 chrX 17290149 17290216 28 126 10.0 4.5 7.2 3.4 193 chrX 17290023 intron,intron CG5445 +,Fim - chrX 17290120 intron,intron CG5445 +,Fim - chrX 17290216 intron,intron CG5445 +,Fim - chrX_28_17290001 chrX_17290001 RAL-301_125b 4513 chrX 17357488 17357531 chrX 17357632 17357660 7 142 5.5 3.0 4.2 1.3 172 chrX 17357488 intergenic not near genes chrX 17357574 intergenic not near genes chrX 17357660 intergenic not near genes chrX_7_17355001 chrX_17355001 RAL-301_125b 4514 chrX 17362442 17362511 chrX 17362584 17362653 21 142 7.5 3.5 5.5 3.2 211 chrX 17362442 intergenic not near genes chrX 17362548 intergenic not near genes chrX 17362653 intergenic not near genes chrX_21_17360001 chrX_17360001 RAL-301_125b 4515 chrX 17431307 17431338 chrX 17431698 17431714 jockey 8 389 9.5 5.5 7.5 0.9 407 chrX 17431307 intron CG12994 - chrX 17431510 intron CG12994 - chrX 17431714 intron CG12994 - chrX_8_17430001 chrX_17430001 RAL-301_125b 4516 chrX 17536812 17536855 chrX 17536946 17536988 10 134 2.0 8.0 5.0 1.7 176 chrX 17536812 intron CG43658 - chrX 17536900 intron CG43658 - chrX 17536988 intron CG43658 - chrX_10_17535001 chrX_17535001 RAL-301_125b 4517 chrX 17544975 17545030 chrX 17545107 17545162 19 131 5.0 6.5 5.8 2.8 187 chrX 17544975 intron CG43658 - chrX 17545068 intron CG43658 - chrX 17545162 intron CG43658 - chrX_19_17545001 chrX_17545001 RAL-301_125b 4518 chrX 17546921 17546995 chrX 17547104 17547178 22 183 0.0 8.5 4.2 4.2 257 chrX 17546921 intron CG43658 - chrX 17547050 intron CG43658 - chrX 17547178 intron CG43658 - chrX_22_17545001 chrX_17545001 RAL-301_125b 4519 chrX 17574497 17574569 chrX 17574761 17574833 21 264 9.0 6.0 7.5 2.5 336 chrX 17574497 exon l(1)G0222 - chrX 17574665 intron l(1)G0222 - chrX 17574833 exon l(1)G0222 - chrX_21_17570001 chrX_17570001 RAL-301_125b 4520 chrX 17708782 17708857 chrX 17708909 17708986 19 127 7.0 8.5 7.8 2.2 204 chrX 17708782 intron CG8173 - chrX 17708884 intron CG8173 - chrX 17708986 intron CG8173 - chrX_19_17705001 chrX_17705001 RAL-301_125b 4521 chrX 17716545 17716549 chrX 17716682 17716686 4 137 3.5 5.5 4.5 0.7 141 chrX 17716545 intron CG42684 + chrX 17716616 intron CG42684 + chrX 17716686 intron CG42684 + chrX_4_17715001 chrX_17715001 RAL-301_125b 4522 chrX 17716552 17716601 chrX 17716677 17716738 19 135 3.0 5.0 4.0 3.8 186 chrX 17716552 intron CG42684 + chrX 17716645 intron CG42684 + chrX 17716738 intron CG42684 + chrX_19_17715001 chrX_17715001 RAL-301_125b 4523 chrX 17731068 17731129 chrX 17731194 17731255 27 126 4.0 6.0 5.0 4.5 187 chrX 17731068 intron CG42684 + chrX 17731162 intron CG42684 + chrX 17731255 intron CG42684 + chrX_27_17730001 chrX_17730001 RAL-301_125b 4524 chrX 17740347 17740397 chrX 17740458 17740494 14 112 10.0 6.5 8.2 1.5 147 chrX 17740347 intron CG42684 + chrX 17740420 intron CG42684 + chrX 17740494 intron CG42684 + chrX_14_17740001 chrX_17740001 RAL-301_125b 4525 chrX 17782179 17782232 chrX 17782327 17782380 26 148 6.5 8.0 7.2 3.2 201 chrX 17782179 intergenic not near genes chrX 17782280 intergenic not near genes chrX 17782380 intergenic not near genes chrX_26_17780001 chrX_17780001 RAL-301_125b 4526 chrX 17782522 17782592 chrX 17782661 17782721 18 137 9.0 5.5 7.2 2.2 199 chrX 17782522 intergenic not near genes chrX 17782622 intergenic not near genes chrX 17782721 intergenic not near genes chrX_18_17780001 chrX_17780001 RAL-301_125b 4527 chrX 17784432 17784486 chrX 17784558 17784612 19 126 3.0 7.5 5.2 3.1 180 chrX 17784432 intergenic not near genes chrX 17784522 intergenic not near genes chrX 17784612 intergenic not near genes chrX_19_17780001 chrX_17780001 RAL-301_125b 4528 chrX 17792917 17792975 chrX 17796263 17796321 flea 14 3345 2.5 9.0 5.8 2.1 3404 chrX 17792917 intron OdsH + chrX 17794619 intron OdsH + chrX 17796321 intron OdsH + chrX_14_17790001 chrX_17790001 RAL-301_125b 4529 chrX 17875776 17875809 chrX 17875903 17875936 9 127 8.5 8.0 8.2 1.0 160 chrX 17875776 intron mnb - chrX 17875856 intron mnb - chrX 17875936 intron mnb - chrX_9_17875001 chrX_17875001 RAL-301_125b 4530 chrX 17939676 17939718 chrX 17939845 17939887 13 169 9.0 8.0 8.5 1.4 211 chrX 17939676 intergenic Sh - chrX 17939782 3` UTR Sh - chrX 17939887 3` UTR Sh - chrX_13_17935001 chrX_17935001 RAL-301_125b 4531 chrX 17968851 17968918 chrX 17969020 17969086 21 168 5.5 8.5 7.0 2.6 235 chrX 17968851 intron Sh - chrX 17968968 intron Sh - chrX 17969086 intron Sh - chrX_21_17965001 chrX_17965001 RAL-301_125b 4532 chrX 18093614 18093680 chrX 18093870 18093929 30 255 10.5 12.0 11.2 2.5 315 chrX 18093614 5` UTR RhoGAP16F + chrX 18093772 5` UTR RhoGAP16F + chrX 18093929 5` UTR RhoGAP16F + chrX_30_18090001 chrX_18090001 RAL-301_125b 4533 chrX 14180199 14180201 chrX 18110357 18110357 4 3930156 13.5 24.0 18.8 0.2 3930158 chrX 14180199 intergenic not near genes chrX 16145278 intron disco-r - chrX 18110357 intron wupA - chrX_4_16145001 chrX_16145001 RAL-301_125b 4534 chrX 18122773 18122841 chrX 18122899 18122967 35 125 10.0 10.0 10.0 3.2 194 chrX 18122773 5` UTR CR45606 + chrX 18122870 5` UTR CR45606 + chrX 18122967 intergenic CR45606 + chrX_35_18120001 chrX_18120001 RAL-301_125b 4535 chrX 18128215 18128270 chrX 18131013 18131066 16 2803 37.0 56.0 46.5 0.3 2851 chrX 18128215 intergenic mir-210 + chrX 18129640 3` UTR CG43133 - chrX 18131066 3` UTR ari-1 - chrX_16_18125001 chrX_18125001 RAL-301_125b 4536 chrX 18175452 18175478 chrX 18175587 18175613 9 135 0.0 11.0 5.5 1.4 161 chrX 18175452 intergenic not near genes chrX 18175532 intergenic not near genes chrX 18175613 intergenic not near genes chrX_9_18175001 chrX_18175001 RAL-301_125b 4537 chrX 18176993 18177024 chrX 18177136 18177167 8 143 13.0 3.0 8.0 0.9 174 chrX 18176993 intergenic not near genes chrX 18177080 intergenic not near genes chrX 18177167 intergenic Frq2 + chrX_8_18175001 chrX_18175001 RAL-301_125b 4538 chrX 18320438 18320501 chrX 18320620 18320683 28 182 0.0 3.5 1.8 10.0 245 chrX 18320438 intron CG6023 - chrX 18320560 intron CG6023 - chrX 18320683 intron CG6023 - chrX_28_18320001 chrX_18320001 RAL-301_125b 4539 chrX 18337376 18337449 chrX 18337526 18337599 29 150 8.0 5.5 6.8 3.7 223 chrX 18337376 intron CG6123 - chrX 18337488 intron CG6123 - chrX 18337599 intron CG6123 - chrX_29_18335001 chrX_18335001 RAL-301_125b 4540 chrX 18427331 18427409 chrX 18427792 18427870 37 461 4.5 3.5 4.0 7.4 539 chrX 18427331 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427870 intergenic not near genes chrX_37_18425001 chrX_18425001 RAL-301_125b 4541 chrX 18429447 18429516 chrX 18434807 18434877 Transpac 35 5361 11.5 5.5 8.5 3.7 5430 chrX 18429447 intergenic not near genes chrX 18432162 intergenic not near genes chrX 18434877 intergenic not near genes chrX_35_18430001 chrX_18430001 RAL-301_125b 4542 chrX 18455205 18455236 chrX 18455335 18455366 16 128 7.5 10.0 8.8 1.6 161 chrX 18455205 intron CG32547 - chrX 18455286 intron CG32547 - chrX 18455366 intron CG32547 - chrX_16_18455001 chrX_18455001 RAL-301_125b 4543 chrX 18479848 18479862 chrX 18479984 18479998 5 136 5.0 7.0 6.0 0.7 150 chrX 18479848 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479923 intergenic Hayan -,CR45714 +,CG32547 - chrX 18479998 3` UTR Hayan - chrX_5_18475001 chrX_18475001 RAL-301_125b 4544 chrX 18486067 18486127 chrX 18486201 18486266 18 138 9.0 6.5 7.8 2.0 199 chrX 18486067 exon psh - chrX 18486166 intron psh - chrX 18486266 intron psh - chrX_18_18485001 chrX_18485001 RAL-301_125b 4545 chrX 18489993 18490055 chrX 18490198 18490260 19 203 5.0 1.5 3.2 4.5 267 chrX 18489993 intergenic CG15046 - chrX 18490126 intergenic not near genes chrX 18490260 intergenic not near genes chrX_19_18490001 chrX_18490001 RAL-301_125b 4546 chrX 12946235 12946235 chrX 18572525 18572525 5 5626290 25.0 30.5 27.8 0.2 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_5_15755001 chrX_15755001 RAL-301_125b 4547 chrX 18644973 18645039 chrX 18645121 18645179 31 147 7.5 12.5 10.0 2.8 206 chrX 18644973 intron Rip11 - chrX 18645076 intron Rip11 - chrX 18645179 intron Rip11 - chrX_31_18645001 chrX_18645001 RAL-301_125b 4548 chrX 18698800 18698878 chrX 18698967 18699045 22 166 4.0 6.5 5.2 3.5 245 chrX 18698800 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699045 intergenic not near genes chrX_22_18695001 chrX_18695001 RAL-301_125b 4549 chrX 18754293 18754344 chrX 18758009 18758061 297 16 3717 11.5 8.0 9.8 1.5 3768 chrX 18754293 intergenic not near genes chrX 18756177 intergenic not near genes chrX 18758061 intergenic not near genes chrX_16_18755001 chrX_18755001 RAL-301_125b 4550 chrX 18774404 18774470 chrX 18774539 18774605 17 134 7.0 1.5 4.2 3.3 201 chrX 18774404 intergenic CCKLR-17D3 - chrX 18774504 intergenic CCKLR-17D3 - chrX 18774605 intergenic not near genes chrX_17_18770001 chrX_18770001 RAL-301_125b 4551 chrX 18881854 18881877 chrX 18881991 18882014 7 137 0.0 12.0 6.0 1.0 160 chrX 18881854 3` UTR CG34401 + chrX 18881934 3` UTR CG34401 + chrX 18882014 3` UTR CG34401 + chrX_7_18880001 chrX_18880001 RAL-301_125b 4552 chrX 18896473 18896549 chrX 18896633 18896710 27 161 3.0 8.5 5.8 4.0 237 chrX 18896473 3` UTR CG7349 + chrX 18896592 intergenic CG7349 + chrX 18896710 intergenic CG7349 + chrX_27_18895001 chrX_18895001 RAL-301_125b 4553 chrX 18896870 18896932 chrX 18896997 18897059 26 125 11.0 8.5 9.8 2.4 189 chrX 18896870 intergenic CG7349 + chrX 18896964 intergenic CG7349 + chrX 18897059 intergenic CG7349 + chrX_26_18895001 chrX_18895001 RAL-301_125b 4554 chrX 18957025 18957090 chrX 18965738 18965803 roo 25 8713 7.5 6.5 7.0 3.1 8778 chrX 18957025 intron CG43759 + chrX 18961414 intron CG43759 + chrX 18965803 intron CG43759 + chrX_25_18960001 chrX_18960001 RAL-301_125b 4555 chrX 18967663 18967730 chrX 18967955 18968022 18 290 6.0 4.5 5.2 2.9 359 chrX 18967663 intron CG43759 + chrX 18967842 intron CG43759 + chrX 18968022 intron CG43759 + chrX_18_18965001 chrX_18965001 RAL-301_125b 4556 chrX 19036390 19036397 chrX 19036516 19036523 5 126 5.5 0.0 2.8 1.3 133 chrX 19036390 intergenic not near genes chrX 19036456 intergenic not near genes chrX 19036523 intergenic not near genes chrX_5_19035001 chrX_19035001 RAL-301_125b 4557 chrX 19056074 19056095 chrX 19056217 19056248 7 152 4.0 18.5 11.2 0.6 174 chrX 19056074 intergenic not near genes chrX 19056161 intergenic not near genes chrX 19056248 intergenic not near genes chrX_7_19055001 chrX_19055001 RAL-301_125b 4558 chrX 19060365 19060431 chrX 19065199 19065265 Doc 26 4834 11.0 11.0 11.0 2.2 4900 chrX 19060365 intron CG14190 + chrX 19062815 intron CG14190 + chrX 19065265 intron CG14190 + chrX_26_19060001 chrX_19060001 RAL-301_125b 4559 chrX 19080282 19080346 chrX 19080438 19080502 16 154 4.5 6.5 5.5 2.5 220 chrX 19080282 intergenic not near genes chrX 19080392 intergenic not near genes chrX 19080502 intergenic not near genes chrX_16_19080001 chrX_19080001 RAL-301_125b 4560 chrX 19084044 19084073 chrX 19084214 19084243 7 170 12.0 0.0 6.0 1.0 199 chrX 19084044 intergenic CR45503 + chrX 19084144 intergenic CR45503 + chrX 19084243 intergenic CR45503 + chrX_7_19080001 chrX_19080001 RAL-301_125b 4561 chrX 19098721 19098777 chrX 19098849 19098905 22 128 0.0 8.5 4.2 4.2 184 chrX 19098721 intergenic not near genes chrX 19098813 intergenic not near genes chrX 19098905 intergenic not near genes chrX_22_19095001 chrX_19095001 RAL-301_125b 4562 chrX 19136510 19136570 chrX 19143479 19143539 412 21 6965 9.5 11.5 10.5 1.8 7029 chrX 19136510 intergenic not near genes chrX 19140024 intergenic not near genes chrX 19143539 3` UTR RhoGAP18B - chrX_21_19140001 chrX_19140001 RAL-301_125b 4563 chrX 19181980 19182047 chrX 19182142 19182209 31 160 4.0 6.5 5.2 5.0 229 chrX 19181980 3` UTR CG7453 + chrX 19182094 intergenic CG7453 + chrX 19182209 intergenic CG7453 + chrX_31_19180001 chrX_19180001 RAL-301_125b 4564 chrX 19356953 19357022 chrX 19358444 19358531 NOF 24 1506 5.0 2.0 3.5 5.3 1578 chrX 19356953 intron kek5 + chrX 19357742 intron kek5 + chrX 19358531 intron kek5 + chrX_24_19355001 chrX_19355001 RAL-301_125b 4565 chrX 19380123 19380179 chrX 19380414 19380470 pogo 22 290 8.5 7.5 8.0 2.4 347 chrX 19380123 intron kek5 + chrX 19380296 intron kek5 + chrX 19380470 intron kek5 + chrX_22_19380001 chrX_19380001 RAL-301_125b 4566 chrX 19437229 19437280 chrX 19444796 19444849 Idefix 12 7567 10.5 10.5 10.5 1.0 7620 chrX 19437229 intron kek5 + chrX 19441039 intron kek5 + chrX 19444849 intron kek5 + chrX_12_19440001 chrX_19440001 RAL-301_125b 4567 chrX 19459992 19460021 chrX 19460130 19460159 18 138 0.0 20.0 10.0 1.6 167 chrX 19459992 intron kek5 + chrX 19460076 intron kek5 + chrX 19460159 intron kek5 + chrX_18_19460001 chrX_19460001 RAL-301_125b 4568 chrX 19461095 19461173 chrX 19461241 19461319 27 144 5.5 7.0 6.2 3.8 224 chrX 19461095 intron kek5 + chrX 19461207 intron kek5 + chrX 19461319 intron kek5 + chrX_27_19460001 chrX_19460001 RAL-301_125b 4569 chrX 19472098 19472150 chrX 19472695 19472744 jockey 17 615 7.0 7.5 7.2 2.1 646 chrX 19472098 intergenic kek5 + chrX 19472421 intergenic not near genes chrX 19472744 intergenic not near genes chrX_17_19470001 chrX_19470001 RAL-301_125b 4570 chrX 19541378 19541443 chrX 19541508 19541573 27 130 5.0 7.0 6.0 3.9 195 chrX 19541378 intron CG32532 - chrX 19541476 intron CG32532 - chrX 19541573 intron CG32532 - chrX_27_19540001 chrX_19540001 RAL-301_125b 4571 chrX 19593902 19593976 chrX 19594037 19594111 27 133 9.5 13.0 11.2 2.2 209 chrX 19593902 exon CG14205 + chrX 19594006 intron CG14205 + chrX 19594111 exon CG14205 + chrX_27_19590001 chrX_19590001 RAL-301_125b 4572 chrX 19661982 19662046 chrX 19662255 19662319 26 272 5.0 10.0 7.5 3.1 337 chrX 19661982 intron CG14223 - chrX 19662150 intron CG14223 - chrX 19662319 intron CG14223 - chrX_26_19660001 chrX_19660001 RAL-301_125b 4573 chrX 19687452 19687472 chrX 19687554 19687593 4 118 22.5 13.0 17.8 0.2 141 chrX 19687452 3` UTR Ubqn + chrX 19687522 3` UTR Ubqn + chrX 19687593 3` UTR Ubqn + chrX_4_19685001 chrX_19685001 RAL-301_125b 4574 chrX 19710036 19710096 chrX 19711865 19711932 S-element 27 1834 12.0 5.5 8.8 2.8 1896 chrX 19710036 intron meso18E - chrX 19710984 intron meso18E - chrX 19711932 intron meso18E - chrX_27_19710001 chrX_19710001 RAL-301_125b 4575 chrX 19751901 19751952 chrX 19752029 19752080 16 127 5.5 3.5 4.5 2.9 179 chrX 19751901 intron Pmp70 + chrX 19751990 intron Pmp70 + chrX 19752080 intron Pmp70 + chrX_16_19750001 chrX_19750001 RAL-301_125b 4576 chrX 19755476 19755553 chrX 19755617 19755694 48 140 9.0 9.0 9.0 4.8 218 chrX 19755476 intron Pmp70 + chrX 19755585 intron Pmp70 + chrX 19755694 intron Pmp70 + chrX_48_19755001 chrX_19755001 RAL-301_125b 4577 chrX 19756076 19756105 chrX 19756212 19756241 12 135 19.5 2.5 11.0 1.0 165 chrX 19756076 intron Pmp70 + chrX 19756158 intron Pmp70 + chrX 19756241 intron Pmp70 + chrX_12_19755001 chrX_19755001 RAL-301_125b 4578 chrX 19762544 19762578 chrX 19762674 19762693 13 128 16.0 8.5 12.2 1.0 149 chrX 19762544 5` UTR CG12702 - chrX 19762618 5` UTR CG12702 - chrX 19762693 5` UTR CG12702 - chrX_13_19760001 chrX_19760001 RAL-301_125b 4579 chrX 19797309 19797340 chrX 19804672 19804686 Stalker4 6 7358 8.0 5.5 6.8 0.8 7377 chrX 19797309 intergenic not near genes chrX 19800998 intergenic not near genes chrX 19804686 intergenic not near genes chrX_6_19800001 chrX_19800001 RAL-301_125b 4580 chrX 19806015 19806076 chrX 19806336 19806399 9 322 8.0 4.0 6.0 1.3 384 chrX 19806015 intergenic not near genes chrX 19806207 intergenic not near genes chrX 19806399 intergenic not near genes chrX_9_19805001 chrX_19805001 RAL-301_125b 4581 chrX 19880337 19880393 chrX 19880506 19880562 12 169 8.5 3.5 6.0 1.7 225 chrX 19880337 intron Hers + chrX 19880450 intron Hers + chrX 19880562 intron Hers + chrX_12_19880001 chrX_19880001 RAL-301_125b 4582 chrX 19881412 19881476 chrX 19881543 19881607 24 131 9.0 9.5 9.2 2.4 195 chrX 19881412 intron Hers + chrX 19881510 intron Hers + chrX 19881607 intron Hers + chrX_24_19880001 chrX_19880001 RAL-301_125b 4583 chrX 19971776 19971826 chrX 19971903 19971953 15 127 13.5 7.0 10.2 1.3 177 chrX 19971776 intergenic not near genes chrX 19971864 intergenic not near genes chrX 19971953 intergenic not near genes chrX_15_19970001 chrX_19970001 RAL-301_125b 4584 chrX 19983846 19983864 chrX 19983976 19983994 11 130 0.0 5.0 2.5 3.1 148 chrX 19983846 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983994 intergenic not near genes chrX_11_19980001 chrX_19980001 RAL-301_125b 4585 chrX 19992373 19992420 chrX 19992494 19992541 10 118 13.0 10.5 11.8 0.8 168 chrX 19992373 intergenic not near genes chrX 19992457 intergenic not near genes chrX 19992541 intergenic not near genes chrX_10_19990001 chrX_19990001 RAL-301_125b 4586 chrX 20041488 20041554 chrX 20041618 20041684 25 130 8.0 12.5 10.2 2.2 196 chrX 20041488 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041684 intron Dop2R - chrX_25_20040001 chrX_20040001 RAL-301_125b 4587 chrX 20082711 20082769 chrX 20082844 20082885 23 131 9.5 9.5 9.5 2.2 174 chrX 20082711 intergenic not near genes chrX 20082798 intergenic not near genes chrX 20082885 intergenic not near genes chrX_23_20080001 chrX_20080001 RAL-301_125b 4588 chrX 20082770 20082783 chrX 20082843 20082886 4 110 6.5 9.5 8.0 0.4 116 chrX 20082770 intergenic not near genes chrX 20082828 intergenic not near genes chrX 20082886 intergenic not near genes chrX_4_20080001 chrX_20080001 RAL-301_125b 4589 chrX 20125346 20125398 chrX 20125478 20125530 15 132 4.0 11.0 7.5 1.8 184 chrX 20125346 intergenic CG34331 + chrX 20125438 intergenic CG34331 + chrX 20125530 intergenic CG34331 + chrX_15_20125001 chrX_20125001 RAL-301_125b 4590 chrX 20132254 20132288 chrX 20132387 20132419 9 133 8.0 9.0 8.5 0.9 165 chrX 20132254 intergenic not near genes chrX 20132336 intergenic not near genes chrX 20132419 intergenic not near genes chrX_9_20130001 chrX_20130001 RAL-301_125b 4591 chrX 20269887 20269954 chrX 20270017 20270083 24 130 8.5 5.0 6.8 3.1 196 chrX 20269887 intergenic Inx6 - chrX 20269985 intergenic Inx6 - chrX 20270083 intergenic Inx6 - chrX_24_20265001 chrX_20265001 RAL-301_125b 4592 chrX 20271453 20271528 chrX 20271595 20271665 13 139 5.5 0.0 2.8 3.4 212 chrX 20271453 intergenic not near genes chrX 20271559 intergenic not near genes chrX 20271665 intergenic not near genes chrX_13_20270001 chrX_20270001 RAL-301_125b 4593 chrX 20312831 20312909 chrX 20312959 20313037 25 128 6.5 5.0 5.8 3.7 206 chrX 20312831 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20313037 intron CG1504 - chrX_25_20310001 chrX_20310001 RAL-301_125b 4594 chrX 20314223 20314262 chrX 20314355 20314389 7 125 8.5 9.5 9.0 0.7 166 chrX 20314223 intron CG1504 - chrX 20314306 intron CG1504 - chrX 20314389 intron CG1504 - chrX_7_20310001 chrX_20310001 RAL-301_125b 4595 chrX 20320253 20320305 chrX 20320380 20320432 18 127 6.0 3.0 4.5 3.3 179 chrX 20320253 intron CG1504 - chrX 20320342 intron CG1504 - chrX 20320432 intron CG1504 - chrX_18_20320001 chrX_20320001 RAL-301_125b 4596 chrX 20362841 20362858 chrX 20362968 20362975 4 123 0.0 0.0 0.0 4.0 134 chrX 20362841 intergenic not near genes chrX 20362908 intergenic not near genes chrX 20362975 intergenic not near genes chrX_4_20360001 chrX_20360001 RAL-301_125b 4597 chrX 20367659 20367723 chrX 20367833 20367897 22 169 9.5 3.5 6.5 2.9 238 chrX 20367659 intergenic not near genes chrX 20367778 intergenic not near genes chrX 20367897 intergenic not near genes chrX_22_20365001 chrX_20365001 RAL-301_125b 4598 chrX 20369270 20369340 chrX 20369404 20369474 31 134 5.5 5.5 5.5 4.8 204 chrX 20369270 intergenic not near genes chrX 20369372 intergenic not near genes chrX 20369474 intergenic not near genes chrX_31_20365001 chrX_20365001 RAL-301_125b 4599 chrX 20377274 20377347 chrX 20378791 20378826 hobo 6 1511 4.5 10.5 7.5 0.7 1552 chrX 20377274 intergenic not near genes chrX 20378050 intergenic not near genes chrX 20378826 intergenic not near genes chrX_6_20375001 chrX_20375001 RAL-301_125b 4600 chrX 20415026 20415081 chrX 20415152 20415207 15 126 4.0 0.5 2.2 4.7 181 chrX 20415026 intergenic not near genes chrX 20415116 intergenic not near genes chrX 20415207 intergenic not near genes chrX_15_20415001 chrX_20415001 RAL-301_125b 4601 chrX 20443164 20443199 chrX 20443290 20443325 13 126 7.5 14.5 11.0 1.1 161 chrX 20443164 exon CG1695 + chrX 20443244 intron CG1695 + chrX 20443325 intron CG1695 + chrX_13_20440001 chrX_20440001 RAL-301_125b 4602 chrX 20497674 20497680 chrX 20497807 20497813 4 133 1.5 23.0 12.2 0.3 139 chrX 20497674 intron RhoGAP19D - chrX 20497744 intron RhoGAP19D - chrX 20497813 intron RhoGAP19D - chrX_4_20495001 chrX_20495001 RAL-301_125b 4603 chrX 20500185 20500255 chrX 20500319 20500389 31 130 5.5 11.5 8.5 3.3 204 chrX 20500185 intron RhoGAP19D - chrX 20500287 intron RhoGAP19D - chrX 20500389 intron RhoGAP19D - chrX_31_20500001 chrX_20500001 RAL-301_125b 4604 chrX 20503117 20503192 chrX 20503264 20503339 24 146 6.0 6.5 6.2 3.3 222 chrX 20503117 intron RhoGAP19D - chrX 20503228 intron RhoGAP19D - chrX 20503339 intron RhoGAP19D - chrX_24_20500001 chrX_20500001 RAL-301_125b 4605 chrX 20504096 20504150 chrX 20505662 20505720 transib2 14 1570 6.0 8.0 7.0 1.8 1624 chrX 20504096 intron RhoGAP19D - chrX 20504908 intron RhoGAP19D - chrX 20505720 intron RhoGAP19D - chrX_14_20500001 chrX_20500001 RAL-301_125b 4606 chrX 20526314 20526464 chrX 20526539 20526630 13 172 11.0 0.0 5.5 2.0 316 chrX 20526314 intergenic not near genes chrX 20526472 intergenic not near genes chrX 20526630 intergenic not near genes chrX_13_20525001 chrX_20525001 RAL-301_125b 4607 chrX 20527924 20527937 chrX 20528067 20528080 10 143 2.5 21.5 12.0 0.8 156 chrX 20527924 exon CG42579 + chrX 20528002 3` UTR CG42579 + chrX 20528080 intergenic CG42579 + chrX_10_20525001 chrX_20525001 RAL-301_125b 4608 chrX 20531646 20531712 chrX 20531786 20531844 11 139 0.0 6.5 3.2 2.6 198 chrX 20531646 intergenic not near genes chrX 20531745 intergenic not near genes chrX 20531844 intergenic not near genes chrX_11_20530001 chrX_20530001 RAL-301_125b 4609 chrX 20546504 20546553 chrX 20546720 20546764 15 216 11.5 4.5 8.0 1.7 260 chrX 20546504 intron RunxB + chrX 20546634 intron RunxB + chrX 20546764 intron RunxB + chrX_15_20545001 chrX_20545001 RAL-301_125b 4610 chrX 20559099 20559133 chrX 20559227 20559261 10 128 0.0 11.0 5.5 1.5 162 chrX 20559099 intron RunxB + chrX 20559180 intron RunxB + chrX 20559261 intron RunxB + chrX_10_20555001 chrX_20555001 RAL-301_125b 4611 chrX 20575115 20575176 chrX 20575243 20575304 22 127 8.0 1.5 4.8 3.8 189 chrX 20575115 intergenic CG42580 + chrX 20575210 intergenic not near genes chrX 20575304 intergenic not near genes chrX_22_20575001 chrX_20575001 RAL-301_125b 4612 chrX 20615095 20615103 chrX 20615230 20615238 6 135 6.0 0.0 3.0 1.5 143 chrX 20615095 intron RunxA - chrX 20615166 intron RunxA - chrX 20615238 intron RunxA - chrX_6_20615001 chrX_20615001 RAL-301_125b 4613 chrX 20662268 20662343 chrX 20662401 20662472 9 131 2.5 5.0 3.8 1.9 204 chrX 20662268 intron CG1835 + chrX 20662370 intron CG1835 + chrX 20662472 intron CG1835 + chrX_9_20660001 chrX_20660001 RAL-301_125b 4614 chrX 20665792 20665833 chrX 20665920 20665961 24 128 6.5 6.0 6.2 3.3 169 chrX 20665792 intron CG1835 + chrX 20665876 intron CG1835 + chrX 20665961 intron CG1835 + chrX_24_20665001 chrX_20665001 RAL-301_125b 4615 chrX 20690034 20690102 chrX 20690167 20690235 27 133 0.5 2.5 1.5 10.8 201 chrX 20690034 intergenic CR45610 - chrX 20690134 intergenic CR45610 - chrX 20690235 intergenic CR45610 -,run + chrX_27_20690001 chrX_20690001 RAL-301_125b 4616 chrX 20704111 20704182 chrX 20704423 20704494 12 310 0.0 0.0 0.0 12.0 383 chrX 20704111 intergenic not near genes chrX 20704302 intergenic not near genes chrX 20704494 intergenic not near genes chrX_12_20700001 chrX_20700001 RAL-301_125b 4617 chrX 20708330 20708384 chrX 20708458 20708512 10 123 12.0 8.0 10.0 0.9 182 chrX 20708330 intergenic not near genes chrX 20708421 intergenic not near genes chrX 20708512 intergenic not near genes chrX_10_20705001 chrX_20705001 RAL-301_125b 4618 chrX 20741117 20741130 chrX 20741249 20741256 6 131 0.0 5.5 2.8 1.6 139 chrX 20741117 intergenic not near genes chrX 20741186 intergenic not near genes chrX 20741256 intergenic not near genes chrX_6_20740001 chrX_20740001 RAL-301_125b 4619 chrX 20741545 20741562 chrX 20741665 20741688 10 125 18.5 0.0 9.2 1.0 143 chrX 20741545 intergenic not near genes chrX 20741616 intergenic not near genes chrX 20741688 intergenic not near genes chrX_10_20740001 chrX_20740001 RAL-301_125b 4620 chrX 20810674 20810744 chrX 20810801 20810872 5 117 3.5 5.5 4.5 0.9 198 chrX 20810674 intron shakB - chrX 20810773 intron shakB - chrX 20810872 intron shakB - chrX_5_20810001 chrX_20810001 RAL-301_125b 4621 chrX 20836684 20836753 chrX 20844336 20844405 roo 19 7652 4.0 7.5 5.8 2.8 7721 chrX 20836684 intron shakB - chrX 20840544 intron shakB - chrX 20844405 intron shakB - chrX_19_20840001 chrX_20840001 RAL-301_125b 4622 chrX 20899804 20899875 chrX 20899946 20900007 17 143 4.0 4.5 4.2 3.3 203 chrX 20899804 intron shakB - chrX 20899906 intron shakB - chrX 20900007 intron shakB - chrX_17_20895001 chrX_20895001 RAL-301_125b 4623 chrX 20915004 20915072 chrX 20915225 20915293 22 220 7.0 9.0 8.0 2.4 289 chrX 20915004 intron shakB - chrX 20915148 intron shakB - chrX 20915293 intron shakB - chrX_22_20915001 chrX_20915001 RAL-301_125b 4624 chrX 20940679 20940719 chrX 20942198 20942226 hobo 9 1517 12.0 3.0 7.5 1.1 1547 chrX 20940679 intergenic not near genes chrX 20941452 intergenic not near genes chrX 20942226 intergenic not near genes chrX_9_20940001 chrX_20940001 RAL-301_125b 4625 chrX 20956923 20956940 chrX 20962417 20962434 I-element 9 5494 4.5 8.0 6.2 1.2 5511 chrX 20956923 intergenic not near genes chrX 20959678 intergenic not near genes chrX 20962434 intergenic Ser6 - chrX_9_20955001 chrX_20955001 RAL-301_125b 4626 chrX 20974162 20974205 chrX 20974396 20974439 13 234 8.0 8.0 8.0 1.4 277 chrX 20974162 intergenic not near genes chrX 20974300 intergenic not near genes chrX 20974439 intergenic not near genes chrX_13_20970001 chrX_20970001 RAL-301_125b 4627 chrX 20988839 20988856 chrX 20988984 20989001 10 145 20.5 18.5 19.5 0.5 162 chrX 20988839 intergenic not near genes chrX 20988920 intergenic not near genes chrX 20989001 intergenic not near genes chrX_10_20985001 chrX_20985001 RAL-301_125b 4628 chrX 20991113 20991121 chrX 20991243 20991251 4 130 16.5 7.0 11.8 0.3 138 chrX 20991113 intergenic not near genes chrX 20991182 intergenic not near genes chrX 20991251 intergenic not near genes chrX_4_20990001 chrX_20990001 RAL-301_125b 4629 chrX 21029524 21029687 chrX 21029662 21029888 16 196 0.0 0.0 0.0 16.0 364 chrX 21029524 3` UTR CG1529 - chrX 21029706 3` UTR CG1529 - chrX 21029888 3` UTR CG1529 - chrX_16_21025001 chrX_21025001 RAL-301_125b 4630 chrX 21058621 21058673 chrX 21058769 21058776 14 145 0.5 3.0 1.8 5.0 155 chrX 21058621 intron bves + chrX 21058698 intron bves + chrX 21058776 intron bves + chrX_14_21055001 chrX_21055001 RAL-301_125b 4631 chrX 21061824 21061894 chrX 21062358 21062422 roo 30 532 7.0 13.0 10.0 2.7 598 chrX 21061824 intron bves + chrX 21062123 intron bves + chrX 21062422 intron,3` UTR bves +,CG32512 - chrX_30_21060001 chrX_21060001 RAL-301_125b 4632 chrX 21076280 21076334 chrX 21076409 21076463 18 129 10.0 0.5 5.2 2.9 183 chrX 21076280 intron bves + chrX 21076372 intron bves + chrX 21076463 intron bves + chrX_18_21075001 chrX_21075001 RAL-301_125b 4633 chrX 21077553 21077631 chrX 21077692 21077747 20 138 4.5 6.0 5.2 3.2 194 chrX 21077553 intron bves + chrX 21077650 intron bves + chrX 21077747 intron bves + chrX_20_21075001 chrX_21075001 RAL-301_125b 4634 chrX 21078721 21078779 chrX 21078849 21078907 15 128 5.0 0.5 2.8 3.9 186 chrX 21078721 intron bves + chrX 21078814 intron bves + chrX 21078907 intron bves + chrX_15_21075001 chrX_21075001 RAL-301_125b 4635 chrX 21086090 21086153 chrX 21087169 21087232 jockey 15 1078 8.0 7.0 7.5 1.8 1142 chrX 21086090 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087232 intergenic not near genes chrX_15_21085001 chrX_21085001 RAL-301_125b 4636 chrX 21088005 21088039 chrX 21088187 21088221 13 182 10.0 3.0 6.5 1.7 216 chrX 21088005 intergenic not near genes chrX 21088113 intergenic not near genes chrX 21088221 intergenic not near genes chrX_13_21085001 chrX_21085001 RAL-301_125b 4637 chrX 21088040 21088053 chrX 21088177 21088235 8 176 7.5 2.5 5.0 1.3 195 chrX 21088040 intergenic not near genes chrX 21088138 intergenic not near genes chrX 21088235 intergenic not near genes chrX_8_21085001 chrX_21085001 RAL-301_125b 4638 chrX 21140901 21140916 chrX 21141033 21141048 8 132 9.5 0.0 4.8 1.4 147 chrX 21140901 3` UTR CG34120 + chrX 21140974 intergenic CG34120 + chrX 21141048 intergenic CG34120 + chrX_8_21140001 chrX_21140001 RAL-301_125b 4639 chrX 21190490 21190789 chrX 21190696 21190920 11 144 0.0 0.0 0.0 11.0 430 chrX 21190490 intergenic not near genes chrX 21190705 intergenic not near genes chrX 21190920 intergenic not near genes chrX_11_21190001 chrX_21190001 RAL-301_125b 4640 chrX 21190798 21190824 chrX 21190905 21190955 13 126 0.0 9.0 4.5 2.4 157 chrX 21190798 intergenic not near genes chrX 21190876 intergenic not near genes chrX 21190955 intergenic not near genes chrX_13_21190001 chrX_21190001 RAL-301_125b 4641 chrX 21197017 21197028 chrX 21197143 21197156 7 128 19.0 8.0 13.5 0.5 139 chrX 21197017 intergenic not near genes chrX 21197086 intergenic not near genes chrX 21197156 intergenic not near genes chrX_7_21195001 chrX_21195001 RAL-301_125b 4642 chrX 21197030 21197084 chrX 21197142 21197196 25 122 10.0 8.0 9.0 2.5 166 chrX 21197030 intergenic not near genes chrX 21197113 intergenic not near genes chrX 21197196 intergenic not near genes chrX_25_21195001 chrX_21195001 RAL-301_125b 4643 chrX 21328071 21328145 chrX 21328232 21328306 21 161 6.0 7.5 6.8 2.7 235 chrX 21328071 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328306 intergenic CG1486 +,tty - chrX_21_21325001 chrX_21325001 RAL-301_125b 4644 chrX 21334303 21334364 chrX 21334458 21334519 11 155 10.5 6.5 8.5 1.2 216 chrX 21334303 intron tty - chrX 21334411 intron tty - chrX 21334519 intron tty - chrX_11_21330001 chrX_21330001 RAL-301_125b 4645 chrX 21358036 21358096 chrX 21358166 21358226 27 130 10.5 8.0 9.2 2.6 190 chrX 21358036 intergenic sol +,Sep1 + chrX 21358131 intergenic Sep1 +,sol + chrX 21358226 intergenic Sep1 +,sol + chrX_27_21355001 chrX_21355001 RAL-301_125b 4646 chrX 21412379 21412427 chrX 21412522 21412570 10 143 4.0 0.5 2.2 3.1 191 chrX 21412379 intergenic not near genes chrX 21412474 intergenic not near genes chrX 21412570 intergenic not near genes chrX_10_21410001 chrX_21410001 RAL-301_125b 4647 chrX 21428309 21428365 chrX 21428535 21428605 13 238 9.0 5.0 7.0 1.6 296 chrX 21428309 intron CG42343 - chrX 21428457 intron CG42343 - chrX 21428605 intron CG42343 - chrX_13_21425001 chrX_21425001 RAL-301_125b 4648 chrX 21429824 21429833 chrX 21429959 21429973 INE-1 7 139 1.0 20.5 10.8 0.6 149 chrX 21429824 intron CG42343 - chrX 21429898 intron CG42343 - chrX 21429973 intron CG42343 - chrX_7_21425001 chrX_21425001 RAL-301_125b 4649 chrX 21454821 21454870 chrX 21454955 21455004 14 134 5.5 5.5 5.5 2.2 183 chrX 21454821 intron CG42343 - chrX 21454912 intron CG42343 - chrX 21455004 intron CG42343 - chrX_14_21450001 chrX_21450001 RAL-301_125b 4650 chrX 21455169 21455242 chrX 21455398 21455479 15 235 3.0 2.0 2.5 4.3 310 chrX 21455169 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455479 intron CG42343 - chrX_15_21455001 chrX_21455001 RAL-301_125b 4651 chrX 21458639 21458725 chrX 21464125 21464211 Ivk 19 5486 6.0 1.5 3.8 4.0 5572 chrX 21458639 intergenic not near genes chrX 21461425 intergenic not near genes chrX 21464211 intergenic not near genes chrX_19_21460001 chrX_21460001 RAL-301_125b 4652 chrX 21474368 21474376 chrX 21474784 21474792 1731 6 416 20.5 10.5 15.5 0.4 424 chrX 21474368 intergenic not near genes chrX 21474580 intergenic not near genes chrX 21474792 intergenic not near genes chrX_6_21470001 chrX_21470001 RAL-301_125b 4653 chrX 21474377 21474433 chrX 21474778 21474849 1731 21 414 8.5 6.5 7.5 2.5 472 chrX 21474377 intergenic not near genes chrX 21474613 intergenic not near genes chrX 21474849 intergenic not near genes chrX_21_21470001 chrX_21470001 RAL-301_125b 4654 chrX 21492233 21492296 chrX 21492396 21492459 24 163 4.0 5.0 4.5 4.4 226 chrX 21492233 intergenic not near genes chrX 21492346 intergenic not near genes chrX 21492459 intergenic not near genes chrX_24_21490001 chrX_21490001 RAL-301_125b 4655 chrX 21500513 21500585 chrX 21500764 21500836 8 251 3.5 7.0 5.2 1.3 323 chrX 21500513 intron CR45082 - chrX 21500674 intron CR45082 - chrX 21500836 intron CR45082 - chrX_8_21500001 chrX_21500001 RAL-301_125b 4656 chrX 21516942 21517013 chrX 21517071 21517101 27 127 8.0 10.0 9.0 2.7 159 chrX 21516942 intron CR45082 - chrX 21517022 intron CR45082 - chrX 21517101 intron CR45082 - chrX_27_21515001 chrX_21515001 RAL-301_125b 4657 chrX 21567934 21568049 chrX 21568040 21568161 7 107 0.5 0.5 0.5 4.7 227 chrX 21567934 intergenic not near genes chrX 21568048 intergenic not near genes chrX 21568161 intergenic not near genes chrX_7_21565001 chrX_21565001 RAL-301_125b 4658 chrX 21668211 21668290 chrX 21668346 21668425 26 135 5.0 1.5 3.2 6.2 214 chrX 21668211 intergenic not near genes chrX 21668318 intergenic not near genes chrX 21668425 intergenic not near genes chrX_26_21665001 chrX_21665001 RAL-301_125b 4659 chrX 22486900 22486946 chrX 22487027 22487073 11 127 4.0 10.0 7.0 1.4 173 chrX 22486900 intron Cp110 + chrX 22486986 intron Cp110 + chrX 22487073 3` UTR Cp110 + chrX_11_22485001 chrX_22485001 RAL-301_125b 4660 chrX 22564569 22564585 chrX 22575091 22575107 jockey 6 10522 29.0 13.0 21.0 0.3 10538 chrX 22564569 intergenic not near genes chrX 22569838 intergenic not near genes chrX 22575107 intergenic not near genes chrX_6_22565001 chrX_22565001 RAL-301_125b 4661 chrX 22660531 22660604 chrX 22660665 22660738 15 134 4.5 3.0 3.8 3.1 207 chrX 22660531 intron CR44997 + chrX 22660634 intron CR44997 + chrX 22660738 intron CR44997 + chrX_15_22660001 chrX_22660001 RAL-301_125b 4662 chrX 22661962 22661980 chrX 22662111 22662129 5 149 0.0 0.0 0.0 5.0 167 chrX 22661962 intron CR44997 + chrX 22662046 intron CR44997 + chrX 22662129 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-301_125b 4663 chrX 22697465 22697512 chrX 22701812 22701859 Juan 16 4347 7.0 10.5 8.8 1.6 4394 chrX 22697465 intron CR44997 + chrX 22699662 intron CR44997 + chrX 22701859 intron CR44997 + chrX_16_22695001 chrX_22695001 RAL-301_125b 4664 chrX 22784047 22784105 chrX 22784180 22784238 14 128 3.5 9.0 6.2 1.9 191 chrX 22784047 intron CR44997 + chrX 22784142 intron CR44997 + chrX 22784238 intron CR44997 + chrX_14_22780001 chrX_22780001 RAL-301_125b 4665 chrX 22796957 22797023 chrX 22797092 22797158 19 135 0.0 8.5 4.2 3.7 201 chrX 22796957 intron CR44997 + chrX 22797058 intron CR44997 + chrX 22797158 intron CR44997 + chrX_19_22795001 chrX_22795001 RAL-301_125b 4666 chrX 22811958 22812005 chrX 22816780 22816827 F-element 19 4822 10.5 11.0 10.8 1.6 4869 chrX 22811958 intergenic CG12446 - chrX 22814392 intergenic not near genes chrX 22816827 intergenic not near genes chrX_19_22810001 chrX_22810001 RAL-301_125b 4667 chrX 22824223 22824434 chrX 22824384 22824617 42 180 0.0 0.0 0.0 42.0 394 chrX 22824223 intergenic fog - chrX 22824420 3` UTR fog - chrX 22824617 3` UTR fog - chrX_42_22820001 chrX_22820001 RAL-301_125b 4668 chrX 22862117 22862134 chrX 22862268 22862285 5 150 12.0 16.5 14.2 0.3 168 chrX 22862117 intron CG42346 + chrX 22862201 intron CG42346 + chrX 22862285 intron CG42346 + chrX_5_22860001 chrX_22860001 RAL-301_125b 4669 chrX 22870821 22870893 chrX 22870962 22871034 17 139 7.0 11.0 9.0 1.7 213 chrX 22870821 intron,3` UTR CG42346 +,CR43656 - chrX 22870928 intron,3` UTR CG42346 +,CR43656 - chrX 22871034 intron,3` UTR CG42346 +,CR43656 - chrX_17_22870001 chrX_22870001 RAL-301_125b 4670 chrX 22987056 22987125 chrX 22989765 22989834 Burdock 35 2709 8.0 8.5 8.2 3.8 2778 chrX 22987056 intron,intron stnA -,stnB - chrX 22988445 intron,intron stnA -,stnB - chrX 22989834 intron,intron stnA -,stnB - chrX_35_22985001 chrX_22985001 RAL-301_125b 4671 chrX 22996269 22996328 chrX 23003553 23003612 roo 21 7283 10.0 9.0 9.5 2.0 7343 chrX 22996269 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003612 intron,intron stnA -,stnB - chrX_21_22995001 chrX_22995001 RAL-301_125b 4672 chrY 864668 864741 chrY 864795 864867 9 127 45.5 43.5 44.5 0.2 199 chrY 864668 intergenic not near genes chrY 864768 intergenic not near genes chrY 864867 intergenic not near genes chrY_9_860001 chrY_860001 RAL-301_125b 4673 chrY 975769 975824 chrY 975894 975981 7 148 249.5 270.0 259.8 0.0 212 chrY 975769 intergenic not near genes chrY 975875 intergenic not near genes chrY 975981 intergenic not near genes chrY_7_975001 chrY_975001 RAL-301_125b 4674 chrY 1419857 1419889 chrY 1420161 1420193 7 304 19.0 11.5 15.2 0.4 336 chrY 1419857 intergenic not near genes chrY 1420025 intergenic not near genes chrY 1420193 intergenic not near genes chrY_7_1420001 chrY_1420001 RAL-301_125b 4675 chrY 1420588 1420652 chrY 1420747 1420778 4 151 15.0 18.5 16.8 0.2 190 chrY 1420588 intergenic not near genes chrY 1420683 intergenic not near genes chrY 1420778 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-301_125b 4676 chrY 1445412 1445436 chrY 1447393 1447416 10 1980 39.5 22.5 31.0 0.3 2004 chrY 1445412 intergenic not near genes chrY 1446414 intergenic not near genes chrY 1447416 intergenic not near genes chrY_10_1445001 chrY_1445001 RAL-301_125b 4677 chrY 3664551 3664627 chrY 3664704 3664775 6 152 0.0 1.5 0.8 3.3 224 chrY 3664551 exon CG40948 + chrY 3664663 intergenic CG40948 + chrY 3664775 intergenic CG40948 + chrY_6_3660001 chrY_3660001 RAL-301_125b 4678 chrY 3664945 3665010 chrY 3665099 3665164 4 154 1.5 2.5 2.0 1.3 219 chrY 3664945 intergenic CG40948 + chrY 3665054 intergenic CG40948 + chrY 3665164 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-301_125b