SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 357167 357241 1360 3387 3 25 74 '13-12 65.55 5.4 3.9 exon Ent1 - chr2L_25_355001 chr2L_355001 0.52 RAL-280 2 chr2L 770000 770062 roo 9052 8663 8 62 '5-3 74.50 0.7 4.7 intergenic not near genes chr2L_8_770001 chr2L_770001 0.62 RAL-280 3 chr2L 893455 893530 hobo 4 2710 14 75 '7-7 67.10 5.5 2.2 intergenic not near genes chr2L_14_890001 chr2L_890001 0.50 RAL-280 4 chr2L 1466423 1466481 Tirant 8489 4 10 58 '4-6 65.26 5.6 1.5 intergenic not near genes chr2L_10_1465001 chr2L_1465001 0.40 RAL-280 5 chr2L 2097551 2097630 roo 8663 408 12 79 '7-5 67.69 2.9 3.1 intron dpr3 - chr2L_12_2095001 chr2L_2095001 0.58 RAL-280 6 chr2L 2904450 2904512 S-element 1706 4 9 62 '1-8 62.88 3.0 2.2 intron lilli + chr2L_9_2900001 chr2L_2900001 0.11 RAL-280 7 chr2L 3116166 3116244 hopper 1 1414 8 78 '4-4 65.51 2.2 2.5 intron toc - chr2L_8_3115001 chr2L_3115001 0.50 RAL-280 8 chr2L 3387997 3388042 roo 22 396 5 45 '1-4 69.98 0.7 2.9 3` UTR CG42460 - chr2L_5_3385001 chr2L_3385001 0.20 RAL-280 9 chr2L 4417022 4417079 412 7541 7072 7 57 '6-1 61.11 2.8 1.8 intron CG15431 - chr2L_7_4415001 chr2L_4415001 0.86 RAL-280 10 chr2L 5108234 5108307 P-element 4 1 8 73 '1-7 45.98 3.4 1.8 intron Msp300 + chr2L_8_5105001 chr2L_5105001 0.12 RAL-280 11 chr2L 5480329 5480404 P-element 2 1 16 75 '8-8 47.74 5.5 2.5 intergenic not near genes chr2L_16_5480001 chr2L_5480001 0.50 RAL-280 12 chr2L 6386919 6386995 mdg3 5496 5254 8 76 '6-2 67.06 3.3 1.9 intron CG42368 - chr2L_8_6385001 chr2L_6385001 0.75 RAL-280 13 chr2L 7027922 7027954 F-element 174 142 16 32 '7-9 63.88 3.8 3.3 exon CG3476 + chr2L_16_7025001 chr2L_7025001 0.44 RAL-280 14 chr2L 7030357 7030408 HMS-Beagle 6796 233 7 51 '6-1 60.54 0.6 4.4 intergenic Rab30 - chr2L_7_7030001 chr2L_7030001 0.86 RAL-280 15 chr2L 7547699 7547768 FB 1 7 7 69 '4-3 63.56 2.8 1.8 intron RapGAP1 - chr2L_7_7545001 chr2L_7545001 0.57 RAL-280 16 chr2L 7974452 7974507 FB 1 21 12 55 '8-4 67.12 1.3 5.2 intron Snoo - chr2L_12_7970001 chr2L_7970001 0.67 RAL-280 17 chr2L 8798559 8798607 pogo 2092 21 8 48 '5-3 70.91 3.2 1.9 intergenic not near genes chr2L_8_8795001 chr2L_8795001 0.62 RAL-280 18 chr2L 9045569 9045638 hobo 2937 7 27 69 '13-14 64.05 6.5 3.6 intergenic not near genes chr2L_27_9045001 chr2L_9045001 0.48 RAL-280 19 chr2L 9547408 9547438 jockey 4667 4698 5 30 '1-4 66.14 2.0 1.7 3` UTR CG13114 + chr2L_5_9545001 chr2L_9545001 0.20 RAL-280 20 chr2L 10941850 10941871 Stalker4 333 7267 5 21 '3-2 60.42 2.4 1.5 intron dpr2 - chr2L_5_10940001 chr2L_10940001 0.60 RAL-280 21 chr2L 11042901 11042943 mdg1 413 9 10 42 '9-1 62.98 3.0 2.5 intron Samuel - chr2L_10_11040001 chr2L_11040001 0.90 RAL-280 22 chr2L 11474121 11474156 jockey 12 6 4 35 '3-1 65.34 4.7 0.7 intergenic not near genes chr2L_4_11470001 chr2L_11470001 0.75 RAL-280 23 chr2L 11528350 11528369 pogo 5 29 9 19 '4-5 68.00 3.9 1.8 intergenic CG31705 - chr2L_9_11525001 chr2L_11525001 0.44 RAL-280 24 chr2L 11600987 11601005 297 7 6606 4 18 '3-1 65.50 4.8 0.7 intron kek2 + chr2L_4_11600001 chr2L_11600001 0.75 RAL-280 25 chr2L 11649229 11649296 P-element 2879 2 9 67 '3-6 52.04 2.8 2.4 intergenic CG6614 - chr2L_9_11645001 chr2L_11645001 0.33 RAL-280 26 chr2L 11864341 11864407 Stalker2 402 7261 6 66 '4-2 61.93 3.0 1.5 intron Pde1c - chr2L_6_11860001 chr2L_11860001 0.67 RAL-280 27 chr2L 11916281 11916355 Tabor 6846 487 21 74 '16-5 60.77 4.0 4.2 intron Pde1c - chr2L_21_11915001 chr2L_11915001 0.76 RAL-280 28 chr2L 12088372 12088447 pogo 1 2095 8 75 '4-4 64.00 2.1 2.6 intergenic CR44593 + chr2L_8_12085001 chr2L_12085001 0.50 RAL-280 29 chr2L 12957070 12957156 copia 4867 259 10 86 '5-5 65.23 1.9 3.4 intergenic not near genes chr2L_10_12955001 chr2L_12955001 0.50 RAL-280 30 chr2L 13469766 13469836 copia 253 4868 5 70 '2-3 66.86 3.1 1.2 intron CG42784 + chr2L_5_13465001 chr2L_13465001 0.40 RAL-280 31 chr2L 13606250 13606321 297 9 6973 6 71 '5-1 67.70 1.9 2.1 intron kuz + chr2L_6_13605001 chr2L_13605001 0.83 RAL-280 32 chr2L 13731087 13731162 412 3 7543 6 75 '3-3 62.81 2.9 1.5 intergenic not near genes chr2L_6_13730001 chr2L_13730001 0.50 RAL-280 33 chr2L 13914809 13914879 pogo 2093 6 4 70 '1-3 56.85 2.7 1.1 5` UTR Ance-3 + chr2L_4_13910001 chr2L_13910001 0.25 RAL-280 34 chr2L 14404340 14404416 1360 3388 3387 13 76 '7-6 64.36 3.6 2.8 intron elB - chr2L_13_14400001 chr2L_14400001 0.54 RAL-280 35 chr2L 14903306 14903374 hopper 1408 1409 12 68 '7-5 65.19 3.0 3.0 intergenic not near genes chr2L_12_14900001 chr2L_14900001 0.58 RAL-280 36 chr2L 15489240 15489307 roo 9063 8663 11 67 '7-4 65.73 4.2 2.1 intergenic not near genes chr2L_11_15485001 chr2L_15485001 0.64 RAL-280 37 chr2L 16034296 16034384 mdg3 250 5249 5 88 '4-1 63.76 2.4 1.5 exon beat-Ic + chr2L_5_16030001 chr2L_16030001 0.80 RAL-280 38 chr2L 17106038 17106068 mdg1 420 7428 6 30 '2-4 69.79 4.2 1.2 intergenic CR45448 + chr2L_6_17105001 chr2L_17105001 0.33 RAL-280 39 chr2L 17135933 17135996 hobo 9 2935 16 63 '7-9 62.65 3.0 4.0 intron,intron CG34106 +,beat-IIIa + chr2L_16_17135001 chr2L_17135001 0.44 RAL-280 40 chr2L 17266284 17266373 HMS-Beagle 2 246 6 89 '3-3 60.80 1.2 2.7 intergenic not near genes chr2L_6_17265001 chr2L_17265001 0.50 RAL-280 41 chr2L 17442599 17442656 Quasimodo 7353 9 4 57 '1-3 65.67 3.2 1.0 intron dl - chr2L_4_17440001 chr2L_17440001 0.25 RAL-280 42 chr2L 17574373 17574441 hopper 1408 7 6 68 '4-2 56.91 3.0 1.5 intergenic mir-287 + chr2L_6_17570001 chr2L_17570001 0.67 RAL-280 43 chr2L 17858717 17858799 roo 8664 410 11 82 '3-8 69.29 2.6 3.1 intron CadN2 - chr2L_11_17855001 chr2L_17855001 0.27 RAL-280 44 chr2L 17870596 17870666 mdg1 7449 1 7 70 '2-5 61.14 3.5 1.6 intron CadN2 - chr2L_7_17870001 chr2L_17870001 0.29 RAL-280 45 chr2L 18309334 18309413 412 1 492 5 79 '3-2 70.14 1.3 2.2 intron CG43354 - chr2L_5_18305001 chr2L_18305001 0.60 RAL-280 46 chr2L 18742540 18742609 P-element 2883 106 16 69 '6-10 48.63 3.9 3.3 intergenic not near genes chr2L_16_18740001 chr2L_18740001 0.38 RAL-280 47 chr2L 19144876 19144950 mdg3 247 5259 7 74 '3-4 63.28 0.8 3.9 intron brat + chr2L_7_19140001 chr2L_19140001 0.43 RAL-280 48 chr2L 19263344 19263422 412 4 494 12 78 '6-6 61.80 4.3 2.3 intergenic CR44191 + chr2L_12_19260001 chr2L_19260001 0.50 RAL-280 49 chr2L 19290848 19290868 F-element 38 19 4 20 '1-3 60.49 2.8 1.1 intergenic not near genes chr2L_4_19290001 chr2L_19290001 0.25 RAL-280 50 chr2L 19620012 19620077 hobo 4 2930 14 65 '10-4 69.36 7.8 1.6 intron Lar + chr2L_14_19620001 chr2L_19620001 0.71 RAL-280 51 chr2L 20165716 20165733 Helena 846 863 12 17 '4-8 54.34 3.4 2.7 intergenic not near genes chr2L_12_20165001 chr2L_20165001 0.33 RAL-280 52 chr2L 20169372 20169435 invader3 25 271 4 63 '1-3 66.33 0.0 4.0 intergenic not near genes chr2L_4_20165001 chr2L_20165001 0.25 RAL-280 53 chr2L 20512507 20512674 Tabor 7324 1 11 167 '5-6 61.59 1.6 4.2 intergenic not near genes chr2L_11_20510001 chr2L_20510001 0.45 RAL-280 54 chr2L 20817929 20818014 HMS-Beagle2 6883 7198 10 85 '5-5 67.37 3.9 2.0 exon CheB38a - chr2L_10_20815001 chr2L_20815001 0.50 RAL-280 55 chr2L 20826209 20826271 1360 15 3387 12 62 '4-8 68.29 2.5 3.4 intron CG9331 + chr2L_12_20825001 chr2L_20825001 0.33 RAL-280 56 chr2L 21276713 21276769 1360 15 7 15 56 '5-10 72.41 5.3 2.4 intron CG8671 + chr2L_15_21275001 chr2L_21275001 0.33 RAL-280 57 chr2L 21360416 21360488 HMS-Beagle2 300 6881 18 72 '3-15 64.79 3.5 4.0 intergenic not near genes chr2L_18_21360001 chr2L_21360001 0.17 RAL-280 58 chr2L 21362786 21362854 roo 407 11 5 68 '4-1 63.38 1.2 2.3 intron dtr + chr2L_5_21360001 chr2L_21360001 0.80 RAL-280 59 chr2L 21767449 21767482 jockey 6 18 13 33 '4-9 61.55 5.4 2.0 intron CG31612 - chr2L_13_21765001 chr2L_21765001 0.31 RAL-280 60 chr2L 21768318 21768379 hopper 15 1411 7 61 '3-4 61.11 5.0 1.2 intron CG31612 - chr2L_7_21765001 chr2L_21765001 0.43 RAL-280 61 chr2L 23068853 23068914 1360 2 16 11 61 '6-5 64.64 3.0 2.8 intergenic CR43242 +,Spf45 - chr2L_11_23065001 chr2L_23065001 0.55 RAL-280 62 chr2L 23295813 23295855 micropia 457 5 7 42 '5-2 65.41 3.9 1.4 intergenic not near genes chr2L_7_23295001 chr2L_23295001 0.71 RAL-280 63 chr2R 557682 557763 gtwin 7388 6914 12 81 '7-5 61.39 3.5 2.7 intron CG40378 + chr2R_12_555001 chr2R_555001 0.58 RAL-280 64 chr2R 1320688 1320708 diver2 366 4878 6 20 '2-4 52.44 19.5 0.3 intergenic not near genes chr2R_6_1320001 chr2R_1320001 0.33 RAL-280 65 chr2R 1683371 1683423 1731 4620 21 7 52 '4-3 64.87 3.2 1.7 intron CG41520 + chr2R_7_1680001 chr2R_1680001 0.57 RAL-280 66 chr2R 2317736 2317773 Max-element 8269 8233 9 37 '4-5 66.53 3.0 2.2 intergenic not near genes chr2R_9_2315001 chr2R_2315001 0.44 RAL-280 67 chr2R 3564081 3564141 F-element 326 380 7 60 '1-6 64.08 2.5 2.0 intergenic not near genes chr2R_7_3560001 chr2R_3560001 0.14 RAL-280 68 chr2R 3919664 3919682 1360 6 24 6 18 '2-4 60.49 2.2 1.9 intron uex - chr2R_6_3915001 chr2R_3915001 0.33 RAL-280 69 chr2R 5499203 5499220 Doc 212 229 8 17 '6-2 67.41 6.4 1.1 intron CG30438 + chr2R_8_5495001 chr2R_5495001 0.75 RAL-280 70 chr2R 5796263 5796316 roo 12 394 5 53 '3-2 65.12 3.2 1.2 3` UTR Tsp42A + chr2R_5_5795001 chr2R_5795001 0.60 RAL-280 71 chr2R 5845342 5845369 roo 5 8696 8 27 '4-4 71.84 4.2 1.5 intron dpr12 + chr2R_8_5845001 chr2R_5845001 0.50 RAL-280 72 chr2R 6023339 6023380 1360 7 3359 14 41 '7-7 69.23 6.6 1.8 intergenic dream - chr2R_14_6020001 chr2R_6020001 0.50 RAL-280 73 chr2R 6682671 6682742 S-element 1709 1711 5 71 '4-1 63.76 1.8 1.8 intron,3` UTR CG9422 +,CR44165 - chr2R_5_6680001 chr2R_6680001 0.80 RAL-280 74 chr2R 7458922 7459001 P-element 2878 22 11 79 '3-8 42.24 6.3 1.5 intergenic Inos - chr2R_11_7455001 chr2R_7455001 0.27 RAL-280 75 chr2R 7621407 7621432 mdg1 7432 7457 8 25 '4-4 64.15 2.2 2.5 intergenic CR44444 - chr2R_8_7620001 chr2R_7620001 0.50 RAL-280 76 chr2R 8087281 8087313 copia 4901 4869 8 32 '5-3 63.90 4.4 1.5 intergenic sut2 +,sut1 + chr2R_8_8085001 chr2R_8085001 0.62 RAL-280 77 chr2R 8142492 8142573 mdg3 5497 5251 14 81 '5-9 62.03 1.2 6.4 intron Lpin - chr2R_14_8140001 chr2R_8140001 0.36 RAL-280 78 chr2R 8201974 8202037 hobo 2927 1 15 63 '6-9 63.24 4.7 2.6 intron LRP1 + chr2R_15_8200001 chr2R_8200001 0.40 RAL-280 79 chr2R 8766886 8766967 roo 411 8666 8 81 '6-2 67.89 1.6 3.1 intergenic not near genes chr2R_8_8765001 chr2R_8765001 0.75 RAL-280 80 chr2R 8920915 8920958 3S18 5774 6077 10 43 '8-2 60.56 5.9 1.4 exon Spt - chr2R_10_8920001 chr2R_8920001 0.80 RAL-280 81 chr2R 9836037 9836113 Tirant 8110 405 8 76 '7-1 68.17 4.4 1.5 intron hebe - chr2R_8_9835001 chr2R_9835001 0.88 RAL-280 82 chr2R 9968361 9968409 1360 3388 3369 5 48 '4-1 55.73 3.0 1.2 3` UTR CG12133 + chr2R_5_9965001 chr2R_9965001 0.80 RAL-280 83 chr2R 10347521 10347599 Tirant 8105 8501 11 78 '7-4 64.17 4.5 2.0 intron CG42732 - chr2R_11_10345001 chr2R_10345001 0.64 RAL-280 84 chr2R 10743848 10743912 hopper 1408 1406 4 64 '2-2 59.39 1.0 2.0 intron CG33144 - chr2R_4_10740001 chr2R_10740001 0.50 RAL-280 85 chr2R 10815725 10815744 flea 250 4990 4 19 '3-1 67.34 2.1 1.3 3` UTR CG7222 + chr2R_4_10815001 chr2R_10815001 0.75 RAL-280 86 chr2R 10972521 10972602 412 2 495 8 81 '2-6 64.40 4.3 1.5 intergenic not near genes chr2R_8_10970001 chr2R_10970001 0.25 RAL-280 87 chr2R 11132987 11133010 jockey 4549 4526 13 23 '6-7 58.78 1.6 5.0 intergenic not near genes chr2R_13_11130001 chr2R_11130001 0.46 RAL-280 88 chr2R 11275049 11275077 mdg3 5252 5279 7 28 '5-2 71.09 8.5 0.7 exon TpnC47D - chr2R_7_11275001 chr2R_11275001 0.71 RAL-280 89 chr2R 12185330 12185405 accord 7380 3 9 75 '4-5 64.73 4.6 1.6 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_9_12185001 chr2R_12185001 0.44 RAL-280 90 chr2R 12336603 12336649 pogo 2070 7 4 46 '1-3 73.16 3.7 0.9 intergenic CG34021 +,CG8490 + chr2R_4_12335001 chr2R_12335001 0.25 RAL-280 91 chr2R 12811175 12811200 I-element 30 4 11 25 '4-7 61.89 3.4 2.5 intergenic not near genes chr2R_11_12810001 chr2R_12810001 0.36 RAL-280 92 chr2R 13403860 13403894 jockey 4975 4679 6 34 '3-3 60.76 3.2 1.4 intergenic not near genes chr2R_6_13400001 chr2R_13400001 0.50 RAL-280 93 chr2R 13437574 13437624 P-element 2880 2874 10 50 '6-4 46.93 6.8 1.3 intron CG42321 - chr2R_10_13435001 chr2R_13435001 0.60 RAL-280 94 chr2R 13714855 13714922 Transpac 14 310 11 67 '3-8 67.51 2.8 2.9 exon fas + chr2R_11_13710001 chr2R_13710001 0.27 RAL-280 95 chr2R 14832213 14832263 blood 9 7368 5 50 '2-3 66.47 2.3 1.5 intergenic not near genes chr2R_5_14830001 chr2R_14830001 0.40 RAL-280 96 chr2R 15878257 15878321 412 2 494 12 64 '7-5 66.33 4.5 2.2 intron sli - chr2R_12_15875001 chr2R_15875001 0.58 RAL-280 97 chr2R 16014222 16014257 412 497 7514 5 35 '4-1 71.33 15.5 0.3 exon Prosbeta1 - chr2R_5_16010001 chr2R_16010001 0.80 RAL-280 98 chr2R 16364865 16364915 roo 10 9054 11 50 '8-3 65.65 4.7 1.9 5` UTR CG15711 - chr2R_11_16360001 chr2R_16360001 0.73 RAL-280 99 chr2R 17302739 17302757 hobo 2930 2912 4 18 '1-3 68.93 6.6 0.5 intron mbl + chr2R_4_17300001 chr2R_17300001 0.25 RAL-280 100 chr2R 17338484 17338546 roo 9054 8665 6 62 '2-4 67.38 2.6 1.7 intron mbl + chr2R_6_17335001 chr2R_17335001 0.33 RAL-280 101 chr2R 17393564 17393586 opus 494 472 7 22 '3-4 65.71 3.0 1.8 intergenic not near genes chr2R_7_17390001 chr2R_17390001 0.43 RAL-280 102 chr2R 17758898 17758970 mdg3 5257 5494 6 72 '1-5 62.82 1.1 2.9 intron HLH54F + chr2R_6_17755001 chr2R_17755001 0.17 RAL-280 103 chr2R 17804805 17804879 1360 2 3388 23 74 '12-11 64.68 3.7 4.9 intron grh + chr2R_23_17800001 chr2R_17800001 0.52 RAL-280 104 chr2R 18269133 18269198 Transpac 4934 310 13 65 '2-11 65.51 4.1 2.5 intergenic not near genes chr2R_13_18265001 chr2R_18265001 0.15 RAL-280 105 chr2R 18796214 18796295 HMS-Beagle 245 6796 15 81 '3-12 65.60 3.0 3.8 intron MFS15 - chr2R_15_18795001 chr2R_18795001 0.20 RAL-280 106 chr2R 19022130 19022210 blood 377 7012 16 80 '10-6 63.90 5.8 2.4 intergenic 5-HT1B - chr2R_16_19020001 chr2R_19020001 0.62 RAL-280 107 chr2R 19253889 19253913 jockey 36 12 11 24 '5-6 60.14 1.9 3.8 intergenic not near genes chr2R_11_19250001 chr2R_19250001 0.45 RAL-280 108 chr2R 19316232 19316304 hobo 4 2938 8 72 '3-5 63.05 3.2 1.9 intron Rgk1 - chr2R_8_19315001 chr2R_19315001 0.38 RAL-280 109 chr2R 19321532 19321607 hobo 2706 7 10 75 '4-6 67.78 2.0 3.3 intron Rgk1 - chr2R_10_19320001 chr2R_19320001 0.40 RAL-280 110 chr2R 19590302 19590369 jockey 4984 4671 8 67 '3-5 64.22 5.2 1.3 intron sm - chr2R_8_19590001 chr2R_19590001 0.38 RAL-280 111 chr2R 19597346 19597419 roo 401 8664 12 73 '4-8 60.53 3.1 2.9 intron sm - chr2R_12_19595001 chr2R_19595001 0.33 RAL-280 112 chr2R 19938818 19938877 roo 9050 8662 5 59 '2-3 67.84 2.2 1.6 intergenic not near genes chr2R_5_19935001 chr2R_19935001 0.40 RAL-280 113 chr2R 20588809 20588894 Tirant 400 8107 14 85 '7-7 64.71 3.5 3.1 intron bl + chr2R_14_20585001 chr2R_20585001 0.50 RAL-280 114 chr2R 22205994 22206063 roo 403 8670 6 69 '4-2 67.55 2.1 1.9 intergenic CG3290 -,CG3292 - chr2R_6_22205001 chr2R_22205001 0.67 RAL-280 115 chr2R 22705216 22705275 412 7544 7071 17 59 '14-3 61.51 8.6 1.8 exon Obp58b + chr2R_17_22705001 chr2R_22705001 0.82 RAL-280 116 chr2R 22738635 22738694 mdg3 5263 5487 11 59 '6-5 62.25 7.7 1.3 intron jbug - chr2R_11_22735001 chr2R_22735001 0.55 RAL-280 117 chr2R 23421370 23421440 roo 8667 403 5 70 '4-1 67.80 1.0 2.5 intergenic CG9815 - chr2R_5_23420001 chr2R_23420001 0.80 RAL-280 118 chr2R 23769768 23769841 roo 402 1 11 73 '5-6 67.83 3.1 2.7 intron CG9850 - chr2R_11_23765001 chr2R_23765001 0.45 RAL-280 119 chr2R 24237083 24237157 flea 5009 4755 4 74 '3-1 63.96 0.5 2.7 intergenic CR44827 - chr2R_4_24235001 chr2R_24235001 0.75 RAL-280 120 chr2R 24242889 24242960 hobo 2934 2 22 71 '8-14 65.33 7.2 2.7 intergenic nord + chr2R_22_24240001 chr2R_24240001 0.36 RAL-280 121 chr3L 677811 677884 opus 3 492 10 73 '2-8 73.04 2.8 2.6 intergenic CG17129 - chr3L_10_675001 chr3L_675001 0.20 RAL-280 122 chr3L 1684921 1684965 pogo 9 2071 4 44 '2-2 69.96 2.9 1.0 intron CG7991 + chr3L_4_1680001 chr3L_1680001 0.50 RAL-280 123 chr3L 1842408 1842465 I-element 8 5348 8 57 '7-1 62.67 2.1 2.6 intergenic Cpr62Bc - chr3L_8_1840001 chr3L_1840001 0.88 RAL-280 124 chr3L 1861962 1862027 P-element 9 2883 12 65 '3-9 49.49 5.1 2.0 5` UTR R - chr3L_12_1860001 chr3L_1860001 0.25 RAL-280 125 chr3L 1920404 1920463 P-element 1 17 14 59 '8-6 52.91 4.9 2.4 intergenic not near genes chr3L_14_1920001 chr3L_1920001 0.57 RAL-280 126 chr3L 2426681 2426724 pogo 2078 18 4 43 '1-3 73.72 2.5 1.1 intron CG45186 + chr3L_4_2425001 chr3L_2425001 0.25 RAL-280 127 chr3L 2608940 2608962 hopper 7 1386 5 22 '3-2 65.07 1.3 2.2 intron Pxn - chr3L_5_2605001 chr3L_2605001 0.60 RAL-280 128 chr3L 3240520 3240588 diver 217 5892 7 68 '3-4 59.26 2.1 2.3 intergenic not near genes chr3L_7_3240001 chr3L_3240001 0.43 RAL-280 129 chr3L 3796159 3796175 pogo 2082 2099 5 16 '2-3 64.98 1.9 1.7 intron CG32264 - chr3L_5_3795001 chr3L_3795001 0.40 RAL-280 130 chr3L 3797640 3797705 roo 8683 412 9 65 '4-5 67.33 3.4 2.0 intron CG32264 - chr3L_9_3795001 chr3L_3795001 0.44 RAL-280 131 chr3L 3798583 3798654 1360 3383 2 7 71 '3-4 68.29 1.0 3.5 intron CG32264 - chr3L_7_3795001 chr3L_3795001 0.43 RAL-280 132 chr3L 3918273 3918290 mdg1 396 413 6 17 '4-2 61.78 3.4 1.4 intron Eip63F-1 - chr3L_6_3915001 chr3L_3915001 0.67 RAL-280 133 chr3L 4121737 4121795 1360 16 3384 13 58 '4-9 63.41 1.7 4.8 intron Chd64 - chr3L_13_4120001 chr3L_4120001 0.31 RAL-280 134 chr3L 4671625 4671646 jockey 16 16 8 21 '5-3 54.35 0.0 8.0 intron axo - chr3L_8_4670001 chr3L_4670001 0.62 RAL-280 135 chr3L 4681811 4681892 Tabor 488 3 9 81 '1-8 68.70 0.7 5.3 intron axo - chr3L_9_4680001 chr3L_4680001 0.11 RAL-280 136 chr3L 5081714 5081773 copia 246 4868 7 59 '2-5 64.62 1.8 2.5 intergenic not near genes chr3L_7_5080001 chr3L_5080001 0.29 RAL-280 137 chr3L 5186689 5186719 jockey 4696 4666 12 30 '6-6 66.04 5.1 2.0 intron shep - chr3L_12_5185001 chr3L_5185001 0.50 RAL-280 138 chr3L 5309524 5309540 jockey 4770 4784 5 16 '2-3 59.71 1.9 1.7 intergenic not near genes chr3L_5_5305001 chr3L_5305001 0.40 RAL-280 139 chr3L 5438752 5438818 hopper 1403 3 6 66 '1-5 63.11 2.5 1.7 intron CG34391 + chr3L_6_5435001 chr3L_5435001 0.17 RAL-280 140 chr3L 6671625 6671697 HMS-Beagle2 300 6881 7 72 '2-5 68.55 2.2 2.2 intergenic not near genes chr3L_7_6670001 chr3L_6670001 0.29 RAL-280 141 chr3L 7024485 7024507 roo 388 410 4 22 '1-3 73.94 2.0 1.3 intron Mp + chr3L_4_7020001 chr3L_7020001 0.25 RAL-280 142 chr3L 7577926 7578005 roo 409 8666 11 79 '5-6 69.30 4.9 1.9 intergenic not near genes chr3L_11_7575001 chr3L_7575001 0.45 RAL-280 143 chr3L 7647118 7647192 S-element 1711 1715 6 74 '2-4 65.16 4.3 1.1 intergenic not near genes chr3L_6_7645001 chr3L_7645001 0.33 RAL-280 144 chr3L 8264692 8264725 jockey 20 4 12 33 '8-4 65.30 20.4 0.6 intron Dscam4 + chr3L_12_8260001 chr3L_8260001 0.67 RAL-280 145 chr3L 8773724 8773798 Tabor 7323 5 10 74 '2-8 62.48 3.6 2.2 intron Fhos + chr3L_10_8770001 chr3L_8770001 0.20 RAL-280 146 chr3L 9122145 9122166 opus 483 488 5 21 '3-2 76.20 2.4 1.5 intron bol - chr3L_5_9120001 chr3L_9120001 0.60 RAL-280 147 chr3L 11186781 11186842 opus 16 493 10 61 '4-6 65.78 3.4 2.3 intron GlcAT-P - chr3L_10_11185001 chr3L_11185001 0.40 RAL-280 148 chr3L 11481999 11482078 297 3 394 10 79 '4-6 69.24 2.8 2.6 intergenic not near genes chr3L_10_11480001 chr3L_11480001 0.40 RAL-280 149 chr3L 11492385 11492471 Tirant 8108 403 18 86 '3-15 65.57 3.7 3.8 intron chrb + chr3L_18_11490001 chr3L_11490001 0.17 RAL-280 150 chr3L 11598931 11598956 jockey 29 4978 4 25 '3-1 67.34 1.2 1.8 intron CG7368 + chr3L_4_11595001 chr3L_11595001 0.75 RAL-280 151 chr3L 12127554 12127613 diver 227 5914 8 59 '5-3 56.67 1.3 3.5 intergenic Ir68b -,CG34241 + chr3L_8_12125001 chr3L_12125001 0.62 RAL-280 152 chr3L 12802090 12802140 copia 4893 249 5 50 '3-2 74.40 2.5 1.4 intron Atg1 - chr3L_5_12800001 chr3L_12800001 0.60 RAL-280 153 chr3L 12938633 12938700 roo 9056 8662 6 67 '2-4 74.29 1.2 2.7 intergenic not near genes chr3L_6_12935001 chr3L_12935001 0.33 RAL-280 154 chr3L 13891078 13891153 copia 4868 249 5 75 '4-1 63.73 0.9 2.6 intron dysc - chr3L_5_13890001 chr3L_13890001 0.80 RAL-280 155 chr3L 14323607 14323661 1360 1 3365 18 54 '7-11 74.51 2.9 4.6 intron,intron fz +,CR45025 - chr3L_18_14320001 chr3L_14320001 0.39 RAL-280 156 chr3L 14780105 14780171 S-element 1707 1707 6 66 '2-4 66.24 2.7 1.6 intron bmm - chr3L_6_14780001 chr3L_14780001 0.33 RAL-280 157 chr3L 14862667 14862716 roo 1 9042 6 49 '4-2 66.56 2.1 1.9 intron CG17839 + chr3L_6_14860001 chr3L_14860001 0.67 RAL-280 158 chr3L 14898493 14898567 Tirant 11 401 13 74 '4-9 64.12 3.7 2.8 intergenic not near genes chr3L_13_14895001 chr3L_14895001 0.31 RAL-280 159 chr3L 14917466 14917489 Rt1b 214 237 12 23 '8-4 58.18 9.1 1.2 intron DCX-EMAP + chr3L_12_14915001 chr3L_14915001 0.67 RAL-280 160 chr3L 15400577 15400654 mdg3 5254 244 9 77 '5-4 65.93 3.0 2.2 intergenic not near genes chr3L_9_15400001 chr3L_15400001 0.56 RAL-280 161 chr3L 15496369 15496387 Doc 11 29 5 18 '3-2 73.33 3.3 1.2 intergenic CG13455 + chr3L_5_15495001 chr3L_15495001 0.60 RAL-280 162 chr3L 15782193 15782269 Tirant 402 8113 18 76 '10-8 66.63 4.1 3.5 intergenic not near genes chr3L_18_15780001 chr3L_15780001 0.56 RAL-280 163 chr3L 16137311 16137359 Juan 4031 4207 6 48 '3-3 57.23 2.5 1.7 5` UTR CG5157 - chr3L_6_16135001 chr3L_16135001 0.50 RAL-280 164 chr3L 16447902 16447968 412 14 493 9 66 '6-3 63.89 1.9 3.1 intron,intron CG33158 +,dsx-c73A - chr3L_9_16445001 chr3L_16445001 0.67 RAL-280 165 chr3L 16556220 16556274 Tabor 6860 7318 9 54 '3-6 62.28 0.8 5.0 intergenic not near genes chr3L_9_16555001 chr3L_16555001 0.33 RAL-280 166 chr3L 16757588 16757648 roo 13 403 6 60 '1-5 64.36 0.7 3.5 intergenic not near genes chr3L_6_16755001 chr3L_16755001 0.17 RAL-280 167 chr3L 16923562 16923639 roo 408 8667 17 77 '6-11 61.14 6.1 2.4 exon CG13028 + chr3L_17_16920001 chr3L_16920001 0.35 RAL-280 168 chr3L 17146680 17146713 jockey 10 6 8 33 '4-4 63.69 1.6 3.1 intron Rbp6 - chr3L_8_17145001 chr3L_17145001 0.50 RAL-280 169 chr3L 17602548 17602627 roo 408 8664 5 79 '2-3 67.94 1.6 1.9 intron Eip74EF - chr3L_5_17600001 chr3L_17600001 0.40 RAL-280 170 chr3L 18320343 18320415 roo 409 8664 10 72 '5-5 70.77 1.3 4.3 intergenic not near genes chr3L_10_18320001 chr3L_18320001 0.50 RAL-280 171 chr3L 18336044 18336082 I-element 5322 4 7 38 '4-3 64.50 0.2 5.8 intergenic not near genes chr3L_7_18335001 chr3L_18335001 0.57 RAL-280 172 chr3L 18472927 18472984 3S18 8 325 11 57 '9-2 66.07 3.4 2.5 intergenic not near genes chr3L_11_18470001 chr3L_18470001 0.82 RAL-280 173 chr3L 19429916 19429962 BS 4994 5074 5 46 '3-2 65.87 3.0 1.2 intergenic not near genes chr3L_5_19425001 chr3L_19425001 0.60 RAL-280 174 chr3L 20155233 20155303 roo 8668 402 9 70 '6-3 67.01 3.2 2.1 exon CG42674 - chr3L_9_20155001 chr3L_20155001 0.67 RAL-280 175 chr3L 20224144 20224171 Chimpo 187 160 4 27 '3-1 68.33 3.6 0.9 intron CG17147 + chr3L_4_20220001 chr3L_20220001 0.75 RAL-280 176 chr3L 20224203 20224222 Transpac 4941 3 6 19 '5-1 58.89 3.2 1.4 intron CG17147 + chr3L_6_20220001 chr3L_20220001 0.83 RAL-280 177 chr3L 20533633 20533714 roo 8664 409 7 81 '2-5 69.52 1.2 3.2 intron Rcd2 - chr3L_7_20530001 chr3L_20530001 0.29 RAL-280 178 chr3L 21186705 21186768 hopper 6 1406 15 63 '12-3 64.07 3.3 3.5 intron CG42337 - chr3L_15_21185001 chr3L_21185001 0.80 RAL-280 179 chr3L 21323676 21323735 hopper 1397 1412 6 59 '2-4 63.13 3.3 1.4 intron Rab26 + chr3L_6_21320001 chr3L_21320001 0.33 RAL-280 180 chr3L 21326811 21326834 Burdock 25 6137 7 23 '3-4 61.47 2.9 1.8 intron Rab26 + chr3L_7_21325001 chr3L_21325001 0.43 RAL-280 181 chr3L 21902768 21902811 FB 17 14 13 43 '5-8 62.75 3.2 3.1 intron mub + chr3L_13_21900001 chr3L_21900001 0.38 RAL-280 182 chr3L 22108090 22108171 Transpac 309 4918 17 81 '7-10 64.05 4.2 3.3 intergenic not near genes chr3L_17_22105001 chr3L_22105001 0.41 RAL-280 183 chr3L 22458844 22458925 roo 409 8665 11 81 '7-4 65.14 3.3 2.6 3` UTR laza - chr3L_11_22455001 chr3L_22455001 0.64 RAL-280 184 chr3L 22697683 22697752 3S18 12 341 7 69 '5-2 60.53 1.8 2.5 3` UTR CG32453 + chr3L_7_22695001 chr3L_22695001 0.71 RAL-280 185 chr3L 22744678 22744695 FB 37 19 4 17 '2-2 75.13 1.5 1.6 intron CG7369 + chr3L_4_22740001 chr3L_22740001 0.50 RAL-280 186 chr3L 22885124 22885155 jockey 8 36 12 31 '5-7 64.00 4.2 2.3 intron slif + chr3L_12_22885001 chr3L_22885001 0.42 RAL-280 187 chr3L 23146486 23146515 1360 5 34 13 29 '6-7 64.78 3.8 2.7 intergenic not near genes chr3L_13_23145001 chr3L_23145001 0.46 RAL-280 188 chr3L 23236499 23236583 Stalker2 405 7247 17 84 '4-13 64.47 4.6 3.0 intron nAChRalpha4 + chr3L_17_23235001 chr3L_23235001 0.24 RAL-280 189 chr3L 23257506 23257568 blood 7029 377 8 62 '4-4 65.85 2.1 2.6 intron nAChRalpha4 + chr3L_8_23255001 chr3L_23255001 0.50 RAL-280 190 chr3L 25414171 25414246 blood 7389 4 15 75 '6-9 64.44 2.9 3.8 intergenic not near genes chr3L_15_25410001 chr3L_25410001 0.40 RAL-280 191 chr3L 25455113 25455168 HMS-Beagle2 6884 287 10 55 '8-2 66.99 4.8 1.7 intergenic not near genes chr3L_10_25455001 chr3L_25455001 0.80 RAL-280 192 chr3R 902575 902606 R1A1-element 5305 5334 8 31 '3-5 62.69 3.3 1.9 intron CG42621 + chr3R_8_900001 chr3R_900001 0.38 RAL-280 193 chr3R 1465881 1465938 gypsy5 6961 413 9 57 '3-6 67.32 3.0 2.2 intergenic not near genes chr3R_9_1465001 chr3R_1465001 0.33 RAL-280 194 chr3R 1704538 1704598 Max-element 296 8245 5 60 '2-3 59.26 1.1 2.4 intergenic not near genes chr3R_5_1700001 chr3R_1700001 0.40 RAL-280 195 chr3R 2275586 2275653 opus 12 495 6 67 '2-4 67.27 2.8 1.6 intergenic not near genes chr3R_6_2275001 chr3R_2275001 0.33 RAL-280 196 chr3R 3377197 3377224 Max-element 276 8262 5 27 '2-3 66.73 1.5 2.0 intergenic not near genes chr3R_5_3375001 chr3R_3375001 0.40 RAL-280 197 chr3R 4514529 4514585 Tabor 9 7308 8 56 '5-3 64.28 1.1 3.8 intron CG34357 - chr3R_8_4510001 chr3R_4510001 0.62 RAL-280 198 chr3R 4553269 4553400 Juan 19 1 6 131 '2-4 62.84 1.1 2.9 intron CG34357 - chr3R_6_4550001 chr3R_4550001 0.33 RAL-280 199 chr3R 4765149 4765220 hobo 2933 1 20 71 '7-13 61.50 4.6 3.6 intron,intron atms +,CG44098 - chr3R_20_4765001 chr3R_4765001 0.35 RAL-280 200 chr3R 4781119 4781190 P-element 2882 1 11 71 '5-6 45.19 4.3 2.1 3` UTR CG17387 - chr3R_11_4780001 chr3R_4780001 0.45 RAL-280 201 chr3R 4984152 4984211 roo 8663 387 13 59 '9-4 69.01 4.2 2.5 5` UTR CG14662 - chr3R_13_4980001 chr3R_4980001 0.69 RAL-280 202 chr3R 5765820 5765892 297 6 390 4 72 '3-1 68.00 2.8 1.1 intron CG2082 - chr3R_4_5765001 chr3R_5765001 0.75 RAL-280 203 chr3R 5934507 5934575 roo 3 406 6 68 '4-2 61.70 4.0 1.2 intron CG34113 - chr3R_6_5930001 chr3R_5930001 0.67 RAL-280 204 chr3R 6426677 6426740 springer 370 7142 7 63 '4-3 67.59 1.0 3.5 intron gpp + chr3R_7_6425001 chr3R_6425001 0.57 RAL-280 205 chr3R 7100989 7101061 pogo 2097 8 11 72 '4-7 69.73 2.7 3.0 intron Alh - chr3R_11_7100001 chr3R_7100001 0.36 RAL-280 206 chr3R 7167016 7167092 Tabor 487 6846 9 76 '4-5 62.99 2.7 2.4 intron sas + chr3R_9_7165001 chr3R_7165001 0.44 RAL-280 207 chr3R 7168127 7168195 opus 498 13 15 68 '7-8 68.32 6.3 2.1 intron sas + chr3R_15_7165001 chr3R_7165001 0.47 RAL-280 208 chr3R 7284464 7284534 hobo 2936 4 14 70 '4-10 62.97 2.7 3.8 intron rn - chr3R_14_7280001 chr3R_7280001 0.29 RAL-280 209 chr3R 7615926 7615956 BS 4993 5024 10 30 '4-6 62.99 5.1 1.6 intron CG34127 - chr3R_10_7615001 chr3R_7615001 0.40 RAL-280 210 chr3R 7642553 7642634 blood 378 1 8 81 '5-3 65.15 2.7 2.2 intergenic not near genes chr3R_8_7640001 chr3R_7640001 0.62 RAL-280 211 chr3R 8389662 8389731 pogo 8 2097 4 69 '2-2 63.93 2.4 1.2 intron CG45263 - chr3R_4_8385001 chr3R_8385001 0.50 RAL-280 212 chr3R 8412920 8412949 F-element 4476 4449 8 29 '3-5 61.59 1.4 3.3 intron CG45263 - chr3R_8_8410001 chr3R_8410001 0.38 RAL-280 213 chr3R 8631252 8631326 412 3 490 11 74 '6-5 66.53 3.7 2.3 intergenic not near genes chr3R_11_8630001 chr3R_8630001 0.55 RAL-280 214 chr3R 8758286 8758364 hopper 1414 2 14 78 '9-5 63.17 3.1 3.4 intron,intron CG11768 -,CG34135 - chr3R_14_8755001 chr3R_8755001 0.64 RAL-280 215 chr3R 8812461 8812530 297 9 390 7 69 '5-2 65.67 1.8 2.5 intron CG9837 - chr3R_7_8810001 chr3R_8810001 0.71 RAL-280 216 chr3R 8875802 8875884 roo 1 412 8 82 '3-5 66.24 2.6 2.2 intron pyd - chr3R_8_8875001 chr3R_8875001 0.38 RAL-280 217 chr3R 9217367 9217435 roo 8664 395 8 68 '3-5 72.17 1.6 3.1 intron pum - chr3R_8_9215001 chr3R_9215001 0.38 RAL-280 218 chr3R 9236979 9237047 P-element 2881 4 14 68 '6-8 44.71 4.8 2.4 5` UTR pum - chr3R_14_9235001 chr3R_9235001 0.43 RAL-280 219 chr3R 9661170 9661247 mdg3 248 5257 13 77 '8-5 66.46 4.0 2.6 intron CG9492 - chr3R_13_9660001 chr3R_9660001 0.62 RAL-280 220 chr3R 9820433 9820489 17.6 7409 6943 7 56 '5-2 64.26 3.0 1.8 intergenic CG42857 - chr3R_7_9820001 chr3R_9820001 0.71 RAL-280 221 chr3R 9862500 9862564 mdg1 7042 7446 8 64 '6-2 59.27 2.2 2.5 intron Teh1 - chr3R_8_9860001 chr3R_9860001 0.75 RAL-280 222 chr3R 10219316 10219389 roo 400 8663 11 73 '6-5 67.37 2.8 2.9 intron Syn + chr3R_11_10215001 chr3R_10215001 0.55 RAL-280 223 chr3R 10729132 10729203 Transpac 4925 311 15 71 '7-8 66.56 3.5 3.3 intergenic not near genes chr3R_15_10725001 chr3R_10725001 0.47 RAL-280 224 chr3R 10990737 10990808 roo 9062 1 7 71 '4-3 61.14 1.0 3.5 intron CG34114 + chr3R_7_10990001 chr3R_10990001 0.57 RAL-280 225 chr3R 11057041 11057116 roo 8663 403 14 75 '7-7 64.94 2.0 4.7 intergenic not near genes chr3R_14_11055001 chr3R_11055001 0.50 RAL-280 226 chr3R 11144992 11145043 copia 254 13 7 51 '4-3 71.73 2.2 2.2 exon CheA86a - chr3R_7_11140001 chr3R_11140001 0.57 RAL-280 227 chr3R 11163035 11163103 mdg1 7450 2 5 68 '2-3 61.98 1.6 1.9 exon CG4757 + chr3R_5_11160001 chr3R_11160001 0.40 RAL-280 228 chr3R 11911228 11911308 S-element 1 1713 4 80 '2-2 69.67 1.3 1.7 intron Cad87A - chr3R_4_11910001 chr3R_11910001 0.50 RAL-280 229 chr3R 12047410 12047466 Stalker2 7649 7247 9 56 '5-4 60.50 4.4 1.7 intergenic not near genes chr3R_9_12045001 chr3R_12045001 0.56 RAL-280 230 chr3R 12059217 12059299 roo 1 411 10 82 '3-7 67.28 2.9 2.6 intergenic not near genes chr3R_10_12055001 chr3R_12055001 0.30 RAL-280 231 chr3R 12727551 12727627 297 387 6580 10 76 '1-9 72.62 2.0 3.3 intergenic CR44231 + chr3R_10_12725001 chr3R_12725001 0.10 RAL-280 232 chr3R 12736676 12736744 roo 12 408 17 68 '5-12 63.73 4.6 3.0 intergenic not near genes chr3R_17_12735001 chr3R_12735001 0.29 RAL-280 233 chr3R 12787370 12787394 jockey 4685 4667 6 24 '4-2 62.72 4.5 1.1 intergenic not near genes chr3R_6_12785001 chr3R_12785001 0.67 RAL-280 234 chr3R 12787893 12787956 297 391 16 5 63 '4-1 68.22 1.6 1.9 intergenic not near genes chr3R_5_12785001 chr3R_12785001 0.80 RAL-280 235 chr3R 13500985 13501048 hobo 3 2928 14 63 '7-7 63.63 4.0 2.8 intergenic not near genes chr3R_14_13500001 chr3R_13500001 0.50 RAL-280 236 chr3R 14101797 14101872 blood 7384 7010 13 75 '3-10 62.65 1.8 4.6 intron PK1-R - chr3R_13_14100001 chr3R_14100001 0.23 RAL-280 237 chr3R 14357440 14357510 roo 8670 404 12 70 '8-4 65.32 2.3 3.6 intron NK7.1 - chr3R_12_14355001 chr3R_14355001 0.67 RAL-280 238 chr3R 14983898 14983924 X-element 39 65 5 26 '3-2 58.67 3.4 1.1 intergenic not near genes chr3R_5_14980001 chr3R_14980001 0.60 RAL-280 239 chr3R 15009488 15009517 jockey 4671 4701 14 29 '8-6 62.12 4.3 2.6 intergenic not near genes chr3R_14_15005001 chr3R_15005001 0.57 RAL-280 240 chr3R 15725071 15725088 F-element 164 180 4 17 '2-2 55.04 3.8 0.8 intergenic not near genes chr3R_4_15725001 chr3R_15725001 0.50 RAL-280 241 chr3R 15747173 15747229 mdg3 5258 227 4 56 '3-1 62.00 3.8 0.8 intergenic not near genes chr3R_4_15745001 chr3R_15745001 0.75 RAL-280 242 chr3R 15773189 15773211 opus 497 498 6 22 '3-3 64.74 8.7 0.6 intergenic not near genes chr3R_6_15770001 chr3R_15770001 0.50 RAL-280 243 chr3R 15938211 15938283 copia 250 3 8 72 '2-6 65.67 2.8 2.1 intron Sap47 + chr3R_8_15935001 chr3R_15935001 0.25 RAL-280 244 chr3R 15938322 15938342 jockey 7 29 12 20 '6-6 55.57 3.8 2.5 intron Sap47 + chr3R_12_15935001 chr3R_15935001 0.50 RAL-280 245 chr3R 16701065 16701135 Tirant 3 8496 13 70 '5-8 63.60 2.6 3.6 intron Ubx - chr3R_13_16700001 chr3R_16700001 0.38 RAL-280 246 chr3R 17335899 17335969 hopper 1412 8 11 70 '7-4 61.72 3.5 2.4 intron beat-IIa - chr3R_11_17335001 chr3R_17335001 0.64 RAL-280 247 chr3R 17461530 17461608 roo 8664 9069 12 78 '7-5 61.51 4.2 2.3 intergenic not near genes chr3R_12_17460001 chr3R_17460001 0.58 RAL-280 248 chr3R 17733270 17733333 INE-1 550 550 4 63 '3-1 64.08 3.0 1.0 intergenic Lgr1 +,CG14321 + chr3R_4_17730001 chr3R_17730001 0.75 RAL-280 249 chr3R 17957260 17957288 Ivk 29 1 7 28 '2-5 62.51 0.9 3.7 intron cpo + chr3R_7_17955001 chr3R_17955001 0.29 RAL-280 250 chr3R 18851036 18851066 flea 4784 4755 6 30 '1-5 69.45 4.0 1.2 3` UTR CR45633 - chr3R_6_18850001 chr3R_18850001 0.17 RAL-280 251 chr3R 18948621 18948689 rover 340 6957 6 68 '2-4 63.67 1.2 2.7 intron CG42613 + chr3R_6_18945001 chr3R_18945001 0.33 RAL-280 252 chr3R 19060906 19060935 opus 466 494 9 29 '3-6 65.21 4.3 1.7 intron cdi - chr3R_9_19060001 chr3R_19060001 0.33 RAL-280 253 chr3R 19065827 19065913 opus 7114 499 13 86 '8-5 74.32 3.2 3.1 intron cdi - chr3R_13_19065001 chr3R_19065001 0.62 RAL-280 254 chr3R 19397999 19398024 Doc 31 6 5 25 '3-2 64.03 7.5 0.6 intron,exon Ino80 -,CG31244 - chr3R_5_19395001 chr3R_19395001 0.60 RAL-280 255 chr3R 19889225 19889303 297 395 6581 8 78 '4-4 67.00 2.8 2.1 intergenic not near genes chr3R_8_19885001 chr3R_19885001 0.50 RAL-280 256 chr3R 20005226 20005300 mdg3 5262 241 11 74 '4-7 62.34 2.2 3.4 intron Hs6st - chr3R_11_20005001 chr3R_20005001 0.36 RAL-280 257 chr3R 20840612 20840665 diver 219 22 4 53 '2-2 65.76 1.2 1.8 intergenic Synd + chr3R_4_20840001 chr3R_20840001 0.50 RAL-280 258 chr3R 21596219 21596295 Transpac 4918 303 8 76 '3-5 63.27 2.6 2.2 intron InR - chr3R_8_21595001 chr3R_21595001 0.38 RAL-280 259 chr3R 21616426 21616493 P-element 2881 2883 5 67 '3-2 56.61 6.0 0.7 intron InR - chr3R_5_21615001 chr3R_21615001 0.60 RAL-280 260 chr3R 21643312 21643370 mdg3 24 248 6 58 '3-3 68.15 1.5 2.4 intron E2f - chr3R_6_21640001 chr3R_21640001 0.50 RAL-280 261 chr3R 22627404 22627434 jockey 4723 4693 7 30 '2-5 64.14 4.0 1.4 intron loco - chr3R_7_22625001 chr3R_22625001 0.29 RAL-280 262 chr3R 22754175 22754242 flea 5007 4764 7 67 '2-5 72.99 1.3 3.0 intron,intron CG7029 +,Usp12-46 + chr3R_7_22750001 chr3R_22750001 0.29 RAL-280 263 chr3R 22842263 22842311 roo 391 8679 5 48 '2-3 61.36 3.6 1.1 intergenic not near genes chr3R_5_22840001 chr3R_22840001 0.40 RAL-280 264 chr3R 23106230 23106292 hobo 2925 1 12 62 '4-8 62.80 5.6 1.8 intron CG13830 - chr3R_12_23105001 chr3R_23105001 0.33 RAL-280 265 chr3R 23226868 23226939 P-element 1 2882 20 71 '13-7 50.05 2.4 5.9 intergenic cnc - chr3R_20_23225001 chr3R_23225001 0.65 RAL-280 266 chr3R 24543555 24543632 Burdock 6390 4 11 77 '6-5 66.20 4.5 2.0 intron CG5789 - chr3R_11_24540001 chr3R_24540001 0.55 RAL-280 267 chr3R 24547837 24547871 I-element 5323 5 5 34 '1-4 64.45 1.8 1.8 intron Esyt2 + chr3R_5_24545001 chr3R_24545001 0.20 RAL-280 268 chr3R 25418444 25418504 HMS-Beagle 7024 6800 6 60 '2-4 68.15 2.2 1.9 intron Fur1 - chr3R_6_25415001 chr3R_25415001 0.33 RAL-280 269 chr3R 25501707 25501785 mdg3 5253 5497 7 78 '5-2 65.63 3.3 1.6 intergenic CR43456 - chr3R_7_25500001 chr3R_25500001 0.71 RAL-280 270 chr3R 25708483 25708555 hopper 1413 1410 10 72 '6-4 69.43 4.6 1.8 intron LpR2 - chr3R_10_25705001 chr3R_25705001 0.60 RAL-280 271 chr3R 25878860 25878892 mdg1 7427 7459 5 32 '4-1 66.67 1.9 1.7 intron Tsp96F - chr3R_5_25875001 chr3R_25875001 0.80 RAL-280 272 chr3R 26058363 26058418 Ivk 5365 5 6 55 '1-5 66.30 1.7 2.2 intergenic RpL34a -,CG14550 -,CG42498 - chr3R_6_26055001 chr3R_26055001 0.17 RAL-280 273 chr3R 26189561 26189626 hobo 2709 13 16 65 '10-6 61.98 5.1 2.6 exon CG34130 - chr3R_16_26185001 chr3R_26185001 0.62 RAL-280 274 chr3R 26271868 26271939 hobo 2710 7 13 71 '6-7 61.69 3.5 2.9 intron CG6154 + chr3R_13_26270001 chr3R_26270001 0.46 RAL-280 275 chr3R 26434512 26434586 invader4 322 2760 11 74 '7-4 65.34 0.5 7.3 intergenic not near genes chr3R_11_26430001 chr3R_26430001 0.64 RAL-280 276 chr3R 26745528 26745590 hobo 11 2934 12 62 '6-6 59.56 5.6 1.8 intergenic not near genes chr3R_12_26745001 chr3R_26745001 0.50 RAL-280 277 chr3R 26968393 26968451 FB 15 3 8 58 '4-4 59.84 0.9 4.2 intron CG5521 + chr3R_8_26965001 chr3R_26965001 0.50 RAL-280 278 chr3R 28274559 28274602 412 7530 22 5 43 '4-1 60.08 3.4 1.1 intergenic not near genes chr3R_5_28270001 chr3R_28270001 0.80 RAL-280 279 chr3R 28663319 28663381 mdg1 7 7447 10 62 '4-6 59.43 4.9 1.7 intergenic not near genes chr3R_10_28660001 chr3R_28660001 0.40 RAL-280 280 chr3R 28783359 28783408 Burdock 32 6390 5 49 '2-3 71.66 1.2 2.3 intergenic not near genes chr3R_5_28780001 chr3R_28780001 0.40 RAL-280 281 chr3R 28951516 28951581 297 6580 376 4 65 '3-1 67.07 3.2 1.0 intron CG14521 - chr3R_4_28950001 chr3R_28950001 0.75 RAL-280 282 chr3R 29073314 29073383 FB 6 2 15 69 '5-10 66.06 4.7 2.6 intron CG11873 + chr3R_15_29070001 chr3R_29070001 0.33 RAL-280 283 chr3R 29257427 29257502 Tirant 395 8112 14 75 '10-4 67.89 3.1 3.4 intergenic CG45544 + chr3R_14_29255001 chr3R_29255001 0.71 RAL-280 284 chr3R 29362309 29362334 412 2 28 5 25 '1-4 63.96 2.5 1.4 intergenic not near genes chr3R_5_29360001 chr3R_29360001 0.20 RAL-280 285 chr3R 29970546 29970570 pogo 27 3 6 24 '3-3 62.08 1.0 3.0 intergenic not near genes chr3R_6_29970001 chr3R_29970001 0.50 RAL-280 286 chr3R 30986846 30986867 I-element 5348 5327 5 21 '3-2 66.20 5.8 0.7 intron 5-HT7 - chr3R_5_30985001 chr3R_30985001 0.60 RAL-280 287 chr3R 31205785 31205843 1360 3384 16 14 58 '7-7 66.65 6.9 1.8 intron chp - chr3R_14_31205001 chr3R_31205001 0.50 RAL-280 288 chr3R 31457618 31457643 jockey 4687 4673 6 25 '4-2 64.93 4.1 1.2 3` UTR Gprk2 + chr3R_6_31455001 chr3R_31455001 0.67 RAL-280 289 chr3R 31548324 31548390 roo 5 9063 4 66 '1-3 56.84 2.5 1.1 intron nyo + chr3R_4_31545001 chr3R_31545001 0.25 RAL-280 290 chr4 406107 406173 Tabor 18 488 11 66 '5-6 66.50 3.5 2.4 intergenic not near genes chr4_11_405001 chr4_405001 0.45 RAL-280 291 chr4 905408 905481 roo 8664 401 14 73 '8-6 64.07 4.8 2.4 5` UTR unc-13 - chr4_14_905001 chr4_905001 0.57 RAL-280 292 chrX 353297 353330 roo 394 32 4 33 '3-1 69.84 1.9 1.4 intron,3` UTR CG32816 -,CG43182 + chrX_4_350001 chrX_350001 0.75 RAL-280 293 chrX 494253 494310 412 22 492 8 57 '2-6 62.57 2.6 2.2 intergenic CG17778 + chrX_8_490001 chrX_490001 0.25 RAL-280 294 chrX 543881 543932 roo 9049 6 8 51 '2-6 67.58 2.6 2.2 intron Appl + chrX_8_540001 chrX_540001 0.25 RAL-280 295 chrX 661987 662062 roo 407 8665 14 75 '6-8 68.50 4.0 2.8 intergenic not near genes chrX_14_660001 chrX_660001 0.43 RAL-280 296 chrX 686075 686132 HMS-Beagle 7022 4 11 57 '3-8 66.87 1.5 4.4 intergenic not near genes chrX_11_685001 chrX_685001 0.27 RAL-280 297 chrX 723045 723116 roo 9064 8666 11 71 '8-3 67.66 3.2 2.6 intron sdk + chrX_11_720001 chrX_720001 0.73 RAL-280 298 chrX 1418422 1418499 pogo 3 2099 9 77 '6-3 69.36 5.0 1.5 intron futsch + chrX_9_1415001 chrX_1415001 0.67 RAL-280 299 chrX 1949483 1949562 S-element 2 1 5 79 '4-1 65.60 2.1 1.6 intron Hr4 + chrX_5_1945001 chrX_1945001 0.80 RAL-280 300 chrX 2507630 2507704 297 6580 6963 6 74 '4-2 65.40 2.8 1.6 intron trol - chrX_6_2505001 chrX_2505001 0.67 RAL-280 301 chrX 2566745 2566821 roo 403 8663 13 76 '5-8 66.20 3.5 2.9 intron Pdfr + chrX_13_2565001 chrX_2565001 0.38 RAL-280 302 chrX 2766508 2766553 FB 26 6 6 45 '2-4 62.96 1.1 2.9 intron kirre + chrX_6_2765001 chrX_2765001 0.33 RAL-280 303 chrX 2781120 2781137 Tabor 25 6847 4 17 '1-3 62.20 0.4 2.9 intron kirre + chrX_4_2780001 chrX_2780001 0.25 RAL-280 304 chrX 2812706 2812786 roo 2 410 9 80 '7-2 68.44 2.0 3.0 intron kirre + chrX_9_2810001 chrX_2810001 0.78 RAL-280 305 chrX 2853674 2853752 flea 5010 4756 9 78 '1-8 64.94 1.3 3.9 intron kirre + chrX_9_2850001 chrX_2850001 0.11 RAL-280 306 chrX 3052796 3052873 Tirant 8504 4 15 77 '11-4 69.59 5.0 2.5 intron kirre + chrX_15_3050001 chrX_3050001 0.73 RAL-280 307 chrX 3925124 3925205 mdg3 5254 248 7 81 '5-2 61.36 4.0 1.4 intron CG42541 - chrX_7_3925001 chrX_3925001 0.71 RAL-280 308 chrX 4216073 4216089 hopper 8 1389 5 16 '3-2 62.42 1.5 2.0 intergenic not near genes chrX_5_4215001 chrX_4215001 0.60 RAL-280 309 chrX 4267233 4267293 Bari1 7 1701 10 60 '6-4 63.26 4.9 1.7 intergenic not near genes chrX_10_4265001 chrX_4265001 0.60 RAL-280 310 chrX 4690802 4690825 jockey 4665 4686 9 23 '3-6 62.98 8.5 0.9 intron ctp + chrX_9_4690001 chrX_4690001 0.33 RAL-280 311 chrX 4757873 4757921 roo 18 394 6 48 '3-3 64.20 2.5 1.7 intergenic not near genes chrX_6_4755001 chrX_4755001 0.50 RAL-280 312 chrX 5201039 5201074 mdg3 213 248 5 35 '2-3 71.73 1.8 1.8 intron,intron CG15465 +,rg + chrX_5_5200001 chrX_5200001 0.40 RAL-280 313 chrX 5473603 5473676 I-element 18 5344 4 73 '3-1 53.53 1.2 1.8 intron SPR + chrX_4_5470001 chrX_5470001 0.75 RAL-280 314 chrX 5887739 5887756 S-element 7 1714 5 17 '2-3 63.71 1.9 1.7 intron CR45668 - chrX_5_5885001 chrX_5885001 0.40 RAL-280 315 chrX 5965767 5965830 P-element 2884 12 10 63 '6-4 47.29 3.7 2.1 intergenic not near genes chrX_10_5965001 chrX_5965001 0.60 RAL-280 316 chrX 6755732 6755753 transib4 154 175 10 21 '6-4 78.28 4.8 1.7 3` UTR CG14439 + chrX_10_6755001 chrX_6755001 0.60 RAL-280 317 chrX 7072906 7072972 pogo 3 2094 8 66 '2-6 72.07 1.0 4.0 intergenic CG4607 + chrX_8_7070001 chrX_7070001 0.25 RAL-280 318 chrX 7183294 7183333 I-element 3 5327 4 39 '3-1 69.07 2.2 1.2 intron,intron CG9650 +,CR44357 - chrX_4_7180001 chrX_7180001 0.75 RAL-280 319 chrX 8180537 8180586 hobo 2930 8 5 49 '2-3 64.46 1.2 2.3 intron sdt + chrX_5_8180001 chrX_8180001 0.40 RAL-280 320 chrX 8188040 8188064 BS 27 1 5 24 '3-2 62.57 0.6 3.1 intron sdt + chrX_5_8185001 chrX_8185001 0.60 RAL-280 321 chrX 8259051 8259110 Burdock 6144 236 4 59 '2-2 62.66 2.7 1.1 intron CG1632 + chrX_4_8255001 chrX_8255001 0.50 RAL-280 322 chrX 8286468 8286485 297 395 378 5 17 '3-2 64.00 6.4 0.7 intron nAChRalpha3 - chrX_5_8285001 chrX_8285001 0.60 RAL-280 323 chrX 8607685 8607742 roo 8678 400 5 57 '1-4 66.56 2.6 1.4 intergenic not near genes chrX_5_8605001 chrX_8605001 0.20 RAL-280 324 chrX 8820791 8820845 Tirant 8141 403 12 54 '7-5 67.98 1.9 4.1 intergenic not near genes chrX_12_8820001 chrX_8820001 0.58 RAL-280 325 chrX 8959302 8959360 FB 5 13 7 58 '5-2 63.85 1.5 2.8 intron rdgA + chrX_7_8955001 chrX_8955001 0.71 RAL-280 326 chrX 9012372 9012425 roo 8692 409 5 53 '1-4 65.87 2.2 1.6 intron,intron rdgA +,CR43836 - chrX_5_9010001 chrX_9010001 0.20 RAL-280 327 chrX 9757547 9757564 roo 16 8697 4 17 '2-2 63.43 6.0 0.6 intergenic not near genes chrX_4_9755001 chrX_9755001 0.50 RAL-280 328 chrX 9777419 9777497 roo 410 2 8 78 '3-5 69.10 0.9 4.2 intergenic not near genes chrX_8_9775001 chrX_9775001 0.38 RAL-280 329 chrX 9951293 9951313 jockey 4681 4681 5 20 '2-3 66.29 1.4 2.1 intergenic not near genes chrX_5_9950001 chrX_9950001 0.40 RAL-280 330 chrX 10119564 10119632 FB 28 3 7 68 '5-2 54.95 1.3 3.0 intron,intron RhoU +,CR44894 - chrX_7_10115001 chrX_10115001 0.71 RAL-280 331 chrX 10436624 10436681 I-element 1 5347 7 57 '6-1 61.28 3.8 1.5 intron CG32683 - chrX_7_10435001 chrX_10435001 0.86 RAL-280 332 chrX 10720366 10720428 FB 7 7 5 62 '1-4 62.67 0.9 2.6 intron CG32676 - chrX_5_10720001 chrX_10720001 0.20 RAL-280 333 chrX 11221713 11221754 pogo 18 2081 6 41 '5-1 72.89 0.7 3.5 intergenic not near genes chrX_6_11220001 chrX_11220001 0.83 RAL-280 334 chrX 11729251 11729321 P-element 2884 5 13 70 '7-6 49.03 5.3 2.1 intron,intron,intron,intron CG15221 +,inaF-B -,inaF-A -,inaF-C - chrX_13_11725001 chrX_11725001 0.54 RAL-280 335 chrX 11918614 11918687 P-element 2 3 8 73 '5-3 56.14 2.0 2.7 3` UTR CR32661 - chrX_8_11915001 chrX_11915001 0.62 RAL-280 336 chrX 12138731 12138794 FB 6 8 6 63 '3-3 58.31 1.9 2.1 intron Ten-a + chrX_6_12135001 chrX_12135001 0.50 RAL-280 337 chrX 12351735 12351786 hopper 1403 1397 10 51 '6-4 62.58 3.0 2.5 intergenic not near genes chrX_10_12350001 chrX_12350001 0.60 RAL-280 338 chrX 12392211 12392280 blood 7017 7383 13 69 '6-7 65.44 3.1 3.2 intergenic not near genes chrX_13_12390001 chrX_12390001 0.46 RAL-280 339 chrX 13546351 13546437 roo 8661 411 9 86 '3-6 69.84 0.8 5.0 intergenic not near genes chrX_9_13545001 chrX_13545001 0.33 RAL-280 340 chrX 13590494 13590545 flea 248 4765 5 51 '2-3 62.18 3.6 1.1 3` UTR Tango13 + chrX_5_13590001 chrX_13590001 0.40 RAL-280 341 chrX 13640720 13640784 P-element 1 13 14 64 '12-2 47.59 1.9 4.8 intron NFAT + chrX_14_13640001 chrX_13640001 0.86 RAL-280 342 chrX 13705965 13706032 roo 4 399 8 67 '2-6 61.60 1.3 3.5 intron,intron CG9940 -,NnaD + chrX_8_13705001 chrX_13705001 0.25 RAL-280 343 chrX 14427631 14427691 pogo 2082 4 6 60 '2-4 66.66 0.9 3.2 intron dpr8 + chrX_6_14425001 chrX_14425001 0.33 RAL-280 344 chrX 14906499 14906569 mdg3 5257 5494 6 70 '3-3 67.08 3.1 1.5 intron,3` UTR Flo2 +,CG9509 - chrX_6_14905001 chrX_14905001 0.50 RAL-280 345 chrX 15369098 15369173 mdg3 5258 248 10 75 '6-4 62.07 3.2 2.4 intron acj6 - chrX_10_15365001 chrX_15365001 0.60 RAL-280 346 chrX 15790636 15790711 flea 4996 4757 4 75 '2-2 65.91 0.8 2.2 intron Rhp + chrX_4_15790001 chrX_15790001 0.50 RAL-280 347 chrX 15946719 15946773 flea 4768 256 7 54 '3-4 71.04 2.1 2.3 intergenic mmd -,Rrp47 + chrX_7_15945001 chrX_15945001 0.43 RAL-280 348 chrX 16481035 16481091 P-element 13 9 15 56 '5-10 45.84 3.2 3.6 intron para - chrX_15_16480001 chrX_16480001 0.33 RAL-280 349 chrX 17030000 17030080 invader3 5184 5460 4 80 '3-1 65.34 2.5 1.1 intron CG45002 - chrX_4_17030001 chrX_17030001 0.75 RAL-280 350 chrX 17091118 17091181 roo 8683 410 6 63 '2-4 66.33 0.7 3.5 intergenic not near genes chrX_6_17090001 chrX_17090001 0.33 RAL-280 351 chrX 17328815 17328894 roo 8662 405 5 79 '2-3 63.88 1.3 2.2 intergenic not near genes chrX_5_17325001 chrX_17325001 0.40 RAL-280 352 chrX 17737094 17737163 jockey 4670 4988 8 69 '5-3 65.61 1.5 3.2 intron CG42684 + chrX_8_17735001 chrX_17735001 0.62 RAL-280 353 chrX 17871591 17871652 pogo 7 2089 7 61 '4-3 60.31 1.8 2.5 intron mnb - chrX_7_17870001 chrX_17870001 0.57 RAL-280 354 chrX 18183444 18183520 mdg1 7042 420 4 76 '1-3 65.18 1.5 1.6 intron Frq2 + chrX_4_18180001 chrX_18180001 0.25 RAL-280 355 chrX 18193722 18193797 hopper 1412 3 4 75 '3-1 65.87 3.1 1.0 intron Frq2 + chrX_4_18190001 chrX_18190001 0.75 RAL-280 356 chrX 18312834 18312894 P-element 2873 4 9 60 '5-4 50.22 4.5 1.6 intergenic not near genes chrX_9_18310001 chrX_18310001 0.56 RAL-280 357 chrX 18356274 18356329 P-element 2883 2870 9 55 '6-3 50.00 1.7 3.3 intergenic CG6123 - chrX_9_18355001 chrX_18355001 0.67 RAL-280 358 chrX 18754032 18754099 roo 400 8669 7 67 '4-3 66.35 2.2 2.2 intergenic not near genes chrX_7_18750001 chrX_18750001 0.57 RAL-280 359 chrX 19796299 19796327 roo 405 9040 15 28 '8-7 65.14 9.4 1.4 intergenic not near genes chrX_15_19795001 chrX_19795001 0.53 RAL-280 360 chrX 20139358 20139378 X-element 31 13 8 20 '4-4 58.08 1.4 3.3 intergenic CG42583 +,CG15322 + chrX_8_20135001 chrX_20135001 0.50 RAL-280 361 chrX 20330532 20330601 P-element 3 2 12 69 '8-4 56.00 4.6 2.1 intergenic CG1504 - chrX_12_20330001 chrX_20330001 0.67 RAL-280 362 chrX 20632094 20632118 jockey 28 7 5 24 '2-3 57.79 3.8 1.0 intergenic not near genes chrX_5_20630001 chrX_20630001 0.40 RAL-280 363 chrX 20809411 20809489 copia 6 262 5 78 '2-3 62.65 0.7 2.9 intron shakB - chrX_5_20805001 chrX_20805001 0.40 RAL-280 364 chrX 20891338 20891399 roo 9071 18 9 61 '6-3 66.71 2.3 2.7 intron shakB - chrX_9_20890001 chrX_20890001 0.67 RAL-280 365 chrX 21667900 21667922 gypsy2 6495 11 6 22 '4-2 65.51 0.0 6.0 intergenic not near genes chrX_6_21665001 chrX_21665001 0.67 RAL-280