SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47460 47488 chr2L 52565 52593 jockey 9 5105 6.0 4.0 5.0 1.5 5133 chr2L 47460 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52593 intron Cda5 - chr2L_9_50001 chr2L_50001 RAL-26 2 chr2L 80160 80191 chr2L 80246 80277 7 86 4.0 4.0 4.0 1.4 117 chr2L 80160 intergenic not near genes chr2L 80218 intergenic not near genes chr2L 80277 intergenic not near genes chr2L_7_80001 chr2L_80001 RAL-26 3 chr2L 177841 177863 chr2L 178028 178050 5 187 1.5 2.0 1.8 1.8 209 chr2L 177841 intron spen + chr2L 177946 intron spen + chr2L 178050 intron spen + chr2L_5_175001 chr2L_175001 RAL-26 4 chr2L 325133 325149 chr2L 325209 325226 4 76 8.5 5.0 6.8 0.5 93 chr2L 325133 intron Plc21C + chr2L 325180 intron Plc21C + chr2L 325226 intron Plc21C + chr2L_4_325001 chr2L_325001 RAL-26 5 chr2L 325892 325928 chr2L 325969 326005 10 75 2.5 3.5 3.0 2.5 113 chr2L 325892 intron,exon Plc21C +,CG43755 - chr2L 325948 intron,exon Plc21C +,CG43755 - chr2L 326005 intron,exon Plc21C +,CG43755 - chr2L_10_325001 chr2L_325001 RAL-26 6 chr2L 335037 335070 chr2L 335113 335146 4 76 2.0 0.0 1.0 2.0 109 chr2L 335037 intron Plc21C + chr2L 335092 intron Plc21C + chr2L 335146 intron Plc21C + chr2L_4_335001 chr2L_335001 RAL-26 7 chr2L 347889 347909 chr2L 355389 355409 blood 4 7500 3.5 0.0 1.8 1.4 7520 chr2L 347889 3` UTR Plc21C + chr2L 351649 intron Plc21C + chr2L 355409 3` UTR Plc21C + chr2L_4_350001 chr2L_350001 RAL-26 8 chr2L 488427 488448 chr2L 488488 488526 4 74 0.5 1.0 0.8 2.2 99 chr2L 488427 intron ush + chr2L 488476 intron ush + chr2L 488526 intron ush + chr2L_4_485001 chr2L_485001 RAL-26 9 chr2L 580135 580159 chr2L 580217 580241 4 82 0.0 1.5 0.8 2.2 106 chr2L 580135 intergenic not near genes chr2L 580188 intergenic not near genes chr2L 580241 intergenic not near genes chr2L_4_580001 chr2L_580001 RAL-26 10 chr2L 590336 590342 chr2L 590428 590433 4 91 2.0 0.5 1.2 1.8 97 chr2L 590336 intron Gsc - chr2L 590384 intron Gsc - chr2L 590433 intron Gsc - chr2L_4_590001 chr2L_590001 RAL-26 11 chr2L 686917 686952 chr2L 695957 695992 roo 12 9039 2.5 2.0 2.2 3.8 9075 chr2L 686917 intron ds - chr2L 691454 intron ds - chr2L 695992 intron ds - chr2L_12_690001 chr2L_690001 RAL-26 12 chr2L 749556 749580 chr2L 749629 749657 7 76 3.0 3.0 3.0 1.8 101 chr2L 749556 intergenic GABA-B-R3 + chr2L 749606 intergenic GABA-B-R3 + chr2L 749657 intergenic GABA-B-R3 + chr2L_7_745001 chr2L_745001 RAL-26 13 chr2L 770466 770490 chr2L 772247 772271 Bari1 9 1781 4.0 4.5 4.2 1.7 1805 chr2L 770466 intergenic not near genes chr2L 771368 intergenic not near genes chr2L 772271 intergenic CR44614 + chr2L_9_770001 chr2L_770001 RAL-26 14 chr2L 843397 843418 chr2L 843668 843688 10 271 5.0 0.0 2.5 2.9 291 chr2L 843397 intron drongo - chr2L 843542 intron drongo - chr2L 843688 intron drongo - chr2L_10_840001 chr2L_840001 RAL-26 15 chr2L 853321 853350 chr2L 853407 853436 7 86 5.0 3.5 4.2 1.3 115 chr2L 853321 intron kraken + chr2L 853378 intron kraken + chr2L 853436 intron kraken + chr2L_7_850001 chr2L_850001 RAL-26 16 chr2L 906553 906573 chr2L 906635 906655 6 82 0.0 6.0 3.0 1.5 102 chr2L 906553 intergenic not near genes chr2L 906604 intergenic not near genes chr2L 906655 intergenic not near genes chr2L_6_905001 chr2L_905001 RAL-26 17 chr2L 912269 912298 chr2L 912670 912699 7 399 3.0 2.5 2.8 1.8 430 chr2L 912269 intergenic not near genes chr2L 912484 intergenic CR44061 - chr2L 912699 intergenic CR44061 - chr2L_7_910001 chr2L_910001 RAL-26 18 chr2L 976881 976912 chr2L 984517 984517 roo 6 7631 0.5 0.0 0.2 5.0 7636 chr2L 976881 intergenic not near genes chr2L 980699 intergenic not near genes chr2L 984517 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-26 19 chr2L 1049199 1049235 chr2L 1049292 1049328 16 91 3.0 1.0 2.0 5.3 129 chr2L 1049199 intergenic S - chr2L 1049264 intergenic S - chr2L 1049328 intergenic S - chr2L_16_1045001 chr2L_1045001 RAL-26 20 chr2L 1196828 1196841 chr2L 1196909 1196922 5 80 3.0 2.5 2.8 1.3 94 chr2L 1196828 intergenic CG5001 + chr2L 1196875 intergenic CG5001 + chr2L 1196922 intergenic CG5001 + chr2L_5_1195001 chr2L_1195001 RAL-26 21 chr2L 1220129 1220158 chr2L 1227595 1227624 blood 8 7466 1.5 0.0 0.8 4.4 7495 chr2L 1220129 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227624 intron CG42329 + chr2L_8_1220001 chr2L_1220001 RAL-26 22 chr2L 1244415 1244436 chr2L 1244492 1244513 6 77 1.5 2.0 1.8 2.1 98 chr2L 1244415 intergenic not near genes chr2L 1244464 intergenic not near genes chr2L 1244513 intergenic not near genes chr2L_6_1240001 chr2L_1240001 RAL-26 23 chr2L 1379032 1379042 chr2L 1379111 1379139 4 90 1.5 1.0 1.2 1.8 107 chr2L 1379032 intergenic not near genes chr2L 1379086 intergenic not near genes chr2L 1379139 intergenic not near genes chr2L_4_1375001 chr2L_1375001 RAL-26 24 chr2L 1410706 1410735 chr2L 1410794 1410823 7 88 3.5 5.0 4.2 1.3 117 chr2L 1410706 intron lea - chr2L 1410764 intron lea - chr2L 1410823 intron lea - chr2L_7_1410001 chr2L_1410001 RAL-26 25 chr2L 1459851 1459879 chr2L 1459957 1459985 5 99 3.5 2.5 3.0 1.2 134 chr2L 1459851 intergenic not near genes chr2L 1459918 intergenic not near genes chr2L 1459985 intergenic not near genes chr2L_5_1455001 chr2L_1455001 RAL-26 26 chr2L 1556994 1557020 chr2L 1557087 1557113 7 92 3.5 0.5 2.0 2.3 119 chr2L 1556994 intron haf + chr2L 1557054 intron haf + chr2L 1557113 intron haf + chr2L_7_1555001 chr2L_1555001 RAL-26 27 chr2L 1570693 1570722 chr2L 1573565 1573594 F-element 5 2872 0.5 2.0 1.2 2.3 2901 chr2L 1570693 intron haf + chr2L 1572144 intron haf + chr2L 1573594 intron haf + chr2L_5_1570001 chr2L_1570001 RAL-26 28 chr2L 1615386 1615411 chr2L 1615468 1615493 6 81 0.0 4.0 2.0 2.0 107 chr2L 1615386 intergenic not near genes chr2L 1615440 intergenic not near genes chr2L 1615493 intergenic not near genes chr2L_6_1615001 chr2L_1615001 RAL-26 29 chr2L 1628847 1628849 chr2L 1629177 1629179 4 330 3.5 4.5 4.0 0.8 332 chr2L 1628847 intergenic not near genes chr2L 1629013 intergenic not near genes chr2L 1629179 intergenic not near genes chr2L_4_1625001 chr2L_1625001 RAL-26 30 chr2L 1678977 1679006 chr2L 1686442 1686471 blood 5 7465 0.5 3.0 1.8 1.8 7494 chr2L 1678977 intron chinmo + chr2L 1682724 intron chinmo + chr2L 1686471 intron chinmo + chr2L_5_1680001 chr2L_1680001 RAL-26 31 chr2L 1711367 1711380 chr2L 1711691 1711704 mdg3 5 324 4.0 6.5 5.2 0.8 337 chr2L 1711367 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711536 3` UTR frtz - chr2L 1711704 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-26 32 chr2L 1736022 1736043 chr2L 1736136 1736157 5 114 1.0 1.0 1.0 2.5 135 chr2L 1736022 intron CG17646 + chr2L 1736090 intron CG17646 + chr2L 1736157 intron CG17646 + chr2L_5_1735001 chr2L_1735001 RAL-26 33 chr2L 1790718 1790747 chr2L 1791173 1791202 6 455 0.5 2.0 1.2 2.7 484 chr2L 1790718 exon Gr22c - chr2L 1790960 exon Gr22c - chr2L 1791202 exon Gr22c - chr2L_6_1790001 chr2L_1790001 RAL-26 34 chr2L 1795455 1795479 chr2L 1795543 1795545 7 85 2.0 0.5 1.2 3.2 90 chr2L 1795455 intergenic not near genes chr2L 1795500 intergenic not near genes chr2L 1795545 intergenic not near genes chr2L_7_1795001 chr2L_1795001 RAL-26 35 chr2L 1828978 1829010 chr2L 1829062 1829091 9 81 0.5 1.5 1.0 4.5 113 chr2L 1828978 intergenic not near genes chr2L 1829034 intergenic not near genes chr2L 1829091 intergenic not near genes chr2L_9_1825001 chr2L_1825001 RAL-26 36 chr2L 1849329 1849357 chr2L 1849420 1849427 11 89 0.5 0.0 0.2 9.2 98 chr2L 1849329 intron wry + chr2L 1849378 intron wry + chr2L 1849427 intron wry + chr2L_11_1845001 chr2L_1845001 RAL-26 37 chr2L 1925490 1925501 chr2L 1925567 1925578 4 77 4.5 2.0 3.2 1.0 88 chr2L 1925490 intron CG7337 + chr2L 1925534 intron CG7337 + chr2L 1925578 intron CG7337 + chr2L_4_1925001 chr2L_1925001 RAL-26 38 chr2L 1944310 1944324 chr2L 1944384 1944401 6 76 3.5 3.0 3.2 1.4 91 chr2L 1944310 intergenic CG7337 + chr2L 1944356 intergenic not near genes chr2L 1944401 intergenic not near genes chr2L_6_1940001 chr2L_1940001 RAL-26 39 chr2L 1947867 1947896 chr2L 1947960 1947989 8 92 1.0 1.0 1.0 4.0 122 chr2L 1947867 intergenic not near genes chr2L 1947928 intergenic not near genes chr2L 1947989 intergenic not near genes chr2L_8_1945001 chr2L_1945001 RAL-26 40 chr2L 1948625 1948658 chr2L 1948732 1948765 4 107 0.0 0.0 0.0 4.0 140 chr2L 1948625 intergenic not near genes chr2L 1948695 intergenic not near genes chr2L 1948765 intergenic not near genes chr2L_4_1945001 chr2L_1945001 RAL-26 41 chr2L 2014054 2014077 chr2L 2014149 2014172 5 93 1.5 1.5 1.5 2.0 118 chr2L 2014054 intron CG4238 + chr2L 2014113 intron CG4238 + chr2L 2014172 intron CG4238 + chr2L_5_2010001 chr2L_2010001 RAL-26 42 chr2L 2100379 2100406 chr2L 2109530 2109554 roo 6 9149 5.0 1.0 3.0 1.5 9175 chr2L 2100379 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109554 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-26 43 chr2L 2112116 2112142 chr2L 2119778 2119804 opus 10 7661 1.0 4.0 2.5 2.9 7688 chr2L 2112116 intergenic not near genes chr2L 2115960 intergenic not near genes chr2L 2119804 intergenic not near genes chr2L_10_2115001 chr2L_2115001 RAL-26 44 chr2L 2262307 2262335 chr2L 2262384 2262402 5 73 2.5 0.0 1.2 2.3 95 chr2L 2262307 intergenic not near genes chr2L 2262354 intergenic not near genes chr2L 2262402 intergenic not near genes chr2L_5_2260001 chr2L_2260001 RAL-26 45 chr2L 2294042 2294069 chr2L 2299247 2299274 copia 7 5204 1.5 3.5 2.5 2.0 5232 chr2L 2294042 intergenic not near genes chr2L 2296658 intergenic not near genes chr2L 2299274 intergenic not near genes chr2L_7_2295001 chr2L_2295001 RAL-26 46 chr2L 2311076 2311092 chr2L 2311172 2311188 6 96 0.5 0.0 0.2 5.0 112 chr2L 2311076 intron CG9967 - chr2L 2311132 intron CG9967 - chr2L 2311188 intron CG9967 - chr2L_6_2310001 chr2L_2310001 RAL-26 47 chr2L 2330873 2330898 chr2L 2330961 2330987 6 89 1.5 3.5 2.5 1.7 114 chr2L 2330873 intron,intron CG9967 -,eys + chr2L 2330930 intron,intron CG9967 -,eys + chr2L 2330987 intron,intron CG9967 -,eys + chr2L_6_2330001 chr2L_2330001 RAL-26 48 chr2L 2503533 2503566 chr2L 2503628 2503662 19 95 2.5 3.5 3.0 4.8 129 chr2L 2503533 intergenic not near genes chr2L 2503598 intergenic not near genes chr2L 2503662 intergenic not near genes chr2L_19_2500001 chr2L_2500001 RAL-26 49 chr2L 2552747 2552769 chr2L 2552827 2552849 11 80 5.0 2.0 3.5 2.4 102 chr2L 2552747 exon CG3515 - chr2L 2552798 5` UTR CG3515 - chr2L 2552849 intergenic CG3515 - chr2L_11_2550001 chr2L_2550001 RAL-26 50 chr2L 2639140 2639166 chr2L 2639216 2639242 6 76 1.0 0.5 0.8 3.3 102 chr2L 2639140 intergenic not near genes chr2L 2639191 intergenic not near genes chr2L 2639242 intergenic not near genes chr2L_6_2635001 chr2L_2635001 RAL-26 51 chr2L 2645564 2645602 chr2L 2645691 2645729 11 127 1.0 2.5 1.8 3.9 165 chr2L 2645564 intergenic CR43852 + chr2L 2645646 intergenic CR43852 + chr2L 2645729 intergenic CR43852 + chr2L_11_2645001 chr2L_2645001 RAL-26 52 chr2L 2653068 2653092 chr2L 2654691 2654716 6 1623 20.0 18.5 19.2 0.3 1648 chr2L 2653068 5` UTR Prosbeta4R1 + chr2L 2653892 3` UTR Prosbeta4R1 + chr2L 2654716 exon Or23a + chr2L_6_2650001 chr2L_2650001 RAL-26 53 chr2L 2661194 2661233 chr2L 2663032 2663071 I-element 8 1837 1.5 2.0 1.8 2.9 1877 chr2L 2661194 intergenic not near genes chr2L 2662132 intergenic not near genes chr2L 2663071 intergenic not near genes chr2L_8_2660001 chr2L_2660001 RAL-26 54 chr2L 2667625 2667657 chr2L 2667704 2667736 14 78 2.0 3.0 2.5 4.0 111 chr2L 2667625 intergenic not near genes chr2L 2667680 intergenic not near genes chr2L 2667736 intergenic not near genes chr2L_14_2665001 chr2L_2665001 RAL-26 55 chr2L 2933308 2933322 chr2L 2935485 2935499 pogo 4 2177 6.0 5.5 5.8 0.6 2191 chr2L 2933308 intron lilli + chr2L 2934404 intron lilli + chr2L 2935499 intron lilli + chr2L_4_2930001 chr2L_2930001 RAL-26 56 chr2L 3001601 3001626 chr2L 3001684 3001709 4 83 1.5 3.0 2.2 1.2 108 chr2L 3001601 intron CG17265 + chr2L 3001655 intron CG17265 + chr2L 3001709 intron CG17265 + chr2L_4_3000001 chr2L_3000001 RAL-26 57 chr2L 3073010 3073029 chr2L 3078233 3078252 copia 5 5223 1.5 2.5 2.0 1.7 5242 chr2L 3073010 intron toc - chr2L 3075631 intron toc - chr2L 3078252 intron toc - chr2L_5_3075001 chr2L_3075001 RAL-26 58 chr2L 3192211 3192237 chr2L 3192322 3192333 9 109 3.0 3.0 3.0 2.2 122 chr2L 3192211 exon CG34393 - chr2L 3192272 intron CG34393 - chr2L 3192333 intron CG34393 - chr2L_9_3190001 chr2L_3190001 RAL-26 59 chr2L 3194150 3194182 chr2L 3194338 3194370 15 188 2.0 3.0 2.5 4.3 220 chr2L 3194150 intron CG34393 - chr2L 3194260 intron CG34393 - chr2L 3194370 intron CG34393 - chr2L_15_3190001 chr2L_3190001 RAL-26 60 chr2L 3251502 3251524 chr2L 3259067 3259089 springer 6 7565 0.5 2.5 1.5 2.4 7587 chr2L 3251502 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259089 intergenic not near genes chr2L_6_3255001 chr2L_3255001 RAL-26 61 chr2L 3271153 3271177 chr2L 3271275 3271299 7 121 4.5 3.5 4.0 1.4 146 chr2L 3271153 exon CG3347 + chr2L 3271226 exon CG3347 + chr2L 3271299 exon CG3347 + chr2L_7_3270001 chr2L_3270001 RAL-26 62 chr2L 3291244 3291270 chr2L 3291324 3291349 7 79 2.0 4.5 3.2 1.7 105 chr2L 3291244 3` UTR CG9664 - chr2L 3291296 3` UTR CG9664 - chr2L 3291349 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-26 63 chr2L 3393791 3393818 chr2L 3393873 3393903 7 84 2.5 6.5 4.5 1.3 112 chr2L 3393791 intergenic not near genes chr2L 3393847 intergenic not near genes chr2L 3393903 intergenic not near genes chr2L_7_3390001 chr2L_3390001 RAL-26 64 chr2L 3398596 3398619 chr2L 3398677 3398700 6 81 1.5 1.0 1.2 2.7 104 chr2L 3398596 3` UTR CG34175 + chr2L 3398648 3` UTR CG34175 + chr2L 3398700 intergenic CG34175 + chr2L_6_3395001 chr2L_3395001 RAL-26 65 chr2L 3582881 3582894 chr2L 3582958 3582971 9 77 0.5 2.0 1.2 4.1 90 chr2L 3582881 intergenic not near genes chr2L 3582926 intergenic not near genes chr2L 3582971 intergenic not near genes chr2L_9_3580001 chr2L_3580001 RAL-26 66 chr2L 3649787 3649819 chr2L 3654990 3655022 copia 9 5203 4.0 1.0 2.5 2.6 5235 chr2L 3649787 intron for - chr2L 3652404 intron for - chr2L 3655022 intron for - chr2L_9_3650001 chr2L_3650001 RAL-26 67 chr2L 3784716 3784727 chr2L 3786373 3786384 4 1657 15.5 11.5 13.5 0.3 1668 chr2L 3784716 intergenic CG31960 + chr2L 3785550 3` UTR CG31960 + chr2L 3786384 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-26 68 chr2L 3798058 3798088 chr2L 3803199 3803229 6 5141 33.5 6.5 20.0 0.3 5171 chr2L 3798058 exon CG3921 + chr2L 3800644 exon CG3921 + chr2L 3803229 intergenic Reph + chr2L_6_3800001 chr2L_3800001 RAL-26 69 chr2L 3897988 3898268 chr2L 3898177 3898353 7 174 2.5 6.5 4.5 1.3 365 chr2L 3897988 intron capu - chr2L 3898170 intron capu - chr2L 3898353 intron capu - chr2L_7_3895001 chr2L_3895001 RAL-26 70 chr2L 4008274 4008301 chr2L 4008359 4008386 10 85 0.5 4.0 2.2 3.1 112 chr2L 4008274 intergenic CG43773 +,CG43774 + chr2L 4008330 intergenic CG43774 +,CG43773 + chr2L 4008386 intergenic CG43774 +,CG43773 + chr2L_10_4005001 chr2L_4005001 RAL-26 71 chr2L 4060182 4060196 chr2L 4060258 4060272 4 76 0.0 0.5 0.2 3.3 90 chr2L 4060182 intron ed + chr2L 4060227 intron ed + chr2L 4060272 intron ed + chr2L_4_4060001 chr2L_4060001 RAL-26 72 chr2L 4066041 4066064 chr2L 4068867 4068887 Juan 4 2825 2.5 3.0 2.8 1.1 2846 chr2L 4066041 intron ed + chr2L 4067464 intron ed + chr2L 4068887 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-26 73 chr2L 4166396 4166408 chr2L 4166479 4166491 6 83 1.0 2.0 1.5 2.4 95 chr2L 4166396 intergenic Or24a - chr2L 4166444 intergenic Or24a - chr2L 4166491 intergenic Or24a - chr2L_6_4165001 chr2L_4165001 RAL-26 74 chr2L 4229623 4229642 chr2L 4229726 4229745 5 103 0.0 7.5 3.8 1.0 122 chr2L 4229623 intergenic CR44608 + chr2L 4229684 intergenic CR44608 + chr2L 4229745 intergenic CR44608 + chr2L_5_4225001 chr2L_4225001 RAL-26 75 chr2L 4260062 4260093 chr2L 4260175 4260202 4 112 1.5 1.0 1.2 1.8 140 chr2L 4260062 3` UTR CR44080 - chr2L 4260132 3` UTR CR44080 - chr2L 4260202 3` UTR CR44080 - chr2L_4_4260001 chr2L_4260001 RAL-26 76 chr2L 4293920 4293942 chr2L 4294006 4294034 6 88 6.0 3.5 4.8 1.0 114 chr2L 4293920 intron tutl + chr2L 4293977 intron tutl + chr2L 4294034 intron tutl + chr2L_6_4290001 chr2L_4290001 RAL-26 77 chr2L 4317880 4317913 chr2L 4317958 4317991 12 78 1.0 2.5 1.8 4.3 111 chr2L 4317880 intron tutl + chr2L 4317936 intron tutl + chr2L 4317991 intron tutl + chr2L_12_4315001 chr2L_4315001 RAL-26 78 chr2L 4340713 4340743 chr2L 4340799 4340829 9 86 1.0 2.5 1.8 3.2 116 chr2L 4340713 intron Atet + chr2L 4340771 intron Atet + chr2L 4340829 intron Atet + chr2L_9_4340001 chr2L_4340001 RAL-26 79 chr2L 4439007 4439035 chr2L 4439093 4439121 7 85 0.5 3.5 2.0 2.3 114 chr2L 4439007 intron CG15431 - chr2L 4439064 intron CG15431 - chr2L 4439121 5` UTR CG15431 - chr2L_7_4435001 chr2L_4435001 RAL-26 80 chr2L 4477140 4477168 chr2L 4477333 4477361 11 193 26.0 13.5 19.8 0.5 221 chr2L 4477140 intergenic ine -,dp - chr2L 4477250 intergenic dp -,ine - chr2L 4477361 intergenic dp -,ine - chr2L_11_4475001 chr2L_4475001 RAL-26 81 chr2L 4562870 4562899 chr2L 4562962 4562991 4 92 2.0 0.0 1.0 2.0 121 chr2L 4562870 intron dp - chr2L 4562930 intron dp - chr2L 4562991 intron dp - chr2L_4_4560001 chr2L_4560001 RAL-26 82 chr2L 4601705 4601720 chr2L 4609143 4609161 mdg1 4 7440 4.5 3.5 4.0 0.8 7456 chr2L 4601705 intron dp - chr2L 4605433 intron dp - chr2L 4609161 intron dp - chr2L_4_4605001 chr2L_4605001 RAL-26 83 chr2L 4770116 4770136 chr2L 4770191 4770219 8 82 3.5 0.5 2.0 2.7 103 chr2L 4770116 intron CG15630 - chr2L 4770168 intron CG15630 - chr2L 4770219 intron CG15630 - chr2L_8_4770001 chr2L_4770001 RAL-26 84 chr2L 4784053 4784063 chr2L 4784142 4784165 6 100 3.0 4.0 3.5 1.3 112 chr2L 4784053 intron CG15630 - chr2L 4784109 intron CG15630 - chr2L 4784165 intron CG15630 - chr2L_6_4780001 chr2L_4780001 RAL-26 85 chr2L 4855298 4855318 chr2L 4855383 4855403 6 84 2.5 2.0 2.2 1.9 105 chr2L 4855298 intron pog + chr2L 4855350 intron pog + chr2L 4855403 intron pog + chr2L_6_4855001 chr2L_4855001 RAL-26 86 chr2L 4858458 4858465 chr2L 4858557 4858564 5 99 2.5 2.0 2.2 1.6 106 chr2L 4858458 intron pog + chr2L 4858511 intron pog + chr2L 4858564 intron pog + chr2L_5_4855001 chr2L_4855001 RAL-26 87 chr2L 4917309 4917342 chr2L 4917399 4917432 8 90 1.5 1.0 1.2 3.6 123 chr2L 4917309 intron hoe1 - chr2L 4917370 intron hoe1 - chr2L 4917432 intron hoe1 - chr2L_8_4915001 chr2L_4915001 RAL-26 88 chr2L 5276721 5276733 chr2L 5276805 5276817 6 84 0.5 2.0 1.2 2.7 96 chr2L 5276721 exon Bsg25D - chr2L 5276769 intron Bsg25D - chr2L 5276817 intron Bsg25D - chr2L_6_5275001 chr2L_5275001 RAL-26 89 chr2L 5433850 5433856 chr2L 5433950 5433951 5 99 0.5 1.5 1.0 2.5 101 chr2L 5433850 3` UTR CR43715 - chr2L 5433900 3` UTR CR43715 - chr2L 5433951 3` UTR CR43715 - chr2L_5_5430001 chr2L_5430001 RAL-26 90 chr2L 5475149 5475162 chr2L 5475254 5475267 5 105 4.0 0.0 2.0 1.7 118 chr2L 5475149 intergenic not near genes chr2L 5475208 intergenic not near genes chr2L 5475267 intergenic not near genes chr2L_5_5475001 chr2L_5475001 RAL-26 91 chr2L 5594318 5594325 chr2L 5594410 5594417 4 92 3.5 0.0 1.8 1.4 99 chr2L 5594318 intergenic not near genes chr2L 5594368 intergenic not near genes chr2L 5594417 intergenic not near genes chr2L_4_5590001 chr2L_5590001 RAL-26 92 chr2L 5619285 5619315 chr2L 5619377 5619407 5 92 3.0 2.5 2.8 1.3 122 chr2L 5619285 intergenic not near genes chr2L 5619346 intergenic CR44796 - chr2L 5619407 intergenic CR44796 - chr2L_5_5615001 chr2L_5615001 RAL-26 93 chr2L 5817439 5817469 chr2L 5817544 5817574 9 105 2.5 3.0 2.8 2.4 135 chr2L 5817439 intergenic CG31644 - chr2L 5817506 intergenic CG31644 - chr2L 5817574 intergenic CG31644 - chr2L_9_5815001 chr2L_5815001 RAL-26 94 chr2L 5827712 5827740 chr2L 5836720 5836748 roo 6 9008 1.0 3.0 2.0 2.0 9036 chr2L 5827712 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836748 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-26 95 chr2L 5853725 5853746 chr2L 5853803 5853831 7 84 1.0 3.5 2.2 2.2 106 chr2L 5853725 intron TrissinR + chr2L 5853778 intron TrissinR + chr2L 5853831 intron TrissinR + chr2L_7_5850001 chr2L_5850001 RAL-26 96 chr2L 5895582 5895605 chr2L 5895698 5895722 5 117 2.0 2.0 2.0 1.7 140 chr2L 5895582 intergenic not near genes chr2L 5895652 intergenic not near genes chr2L 5895722 intergenic not near genes chr2L_5_5895001 chr2L_5895001 RAL-26 97 chr2L 5897592 5897626 chr2L 5897675 5897709 16 82 7.0 5.0 6.0 2.3 117 chr2L 5897592 intergenic not near genes chr2L 5897650 intergenic not near genes chr2L 5897709 intergenic not near genes chr2L_16_5895001 chr2L_5895001 RAL-26 98 chr2L 5989036 5989063 chr2L 5989112 5989139 4 76 2.5 0.0 1.2 1.8 103 chr2L 5989036 intergenic ifc +,lid - chr2L 5989088 intergenic ifc +,lid - chr2L 5989139 intergenic lid -,ifc + chr2L_4_5985001 chr2L_5985001 RAL-26 99 chr2L 5993329 5993362 chr2L 5993420 5993453 9 90 1.5 3.5 2.5 2.6 124 chr2L 5993329 exon lid - chr2L 5993391 intron lid - chr2L 5993453 intron lid - chr2L_9_5990001 chr2L_5990001 RAL-26 100 chr2L 6021618 6021638 chr2L 6021696 6021716 5 78 5.0 0.0 2.5 1.4 98 chr2L 6021618 exon CG13996 + chr2L 6021667 exon CG13996 + chr2L 6021716 3` UTR CG13996 + chr2L_5_6020001 chr2L_6020001 RAL-26 101 chr2L 6102340 6102371 chr2L 6102599 6102630 6 259 1.5 2.0 1.8 2.1 290 chr2L 6102340 intron stai + chr2L 6102485 intron stai + chr2L 6102630 intron stai + chr2L_6_6100001 chr2L_6100001 RAL-26 102 chr2L 6153688 6153721 chr2L 6153784 6153816 8 96 4.5 1.5 3.0 2.0 128 chr2L 6153688 3` UTR Muc26B + chr2L 6153752 intergenic Muc26B +,CG31639 - chr2L 6153816 intergenic CG31639 -,Muc26B + chr2L_8_6150001 chr2L_6150001 RAL-26 103 chr2L 6286390 6286422 chr2L 6286484 6286509 7 93 1.5 0.5 1.0 3.5 119 chr2L 6286390 intron Ddr + chr2L 6286450 intron Ddr + chr2L 6286509 intron Ddr + chr2L_7_6285001 chr2L_6285001 RAL-26 104 chr2L 6363151 6363180 chr2L 6366073 6366102 Burdock 5 2922 1.5 2.5 2.0 1.7 2951 chr2L 6363151 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366102 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-26 105 chr2L 6388009 6388023 chr2L 6388088 6388102 4 79 1.0 0.5 0.8 2.2 93 chr2L 6388009 intron CG42368 - chr2L 6388056 intron CG42368 - chr2L 6388102 intron CG42368 - chr2L_4_6385001 chr2L_6385001 RAL-26 106 chr2L 6426860 6426877 chr2L 6445120 6445137 roo 9 18260 3.0 4.5 3.8 1.9 18277 chr2L 6426860 3` UTR CG9527 - chr2L 6435998 intron CG9527 - chr2L 6445137 exon CG9527 - chr2L_9_6435001 chr2L_6435001 RAL-26 107 chr2L 6514128 6514160 chr2L 6514205 6514238 7 77 3.5 3.5 3.5 1.6 110 chr2L 6514128 intron CG31637 + chr2L 6514183 intron CG31637 + chr2L 6514238 intron CG31637 + chr2L_7_6510001 chr2L_6510001 RAL-26 108 chr2L 6589946 6590228 chr2L 6590027 6590303 12 79 5.5 1.0 3.2 2.9 357 chr2L 6589946 intron CG11319 - chr2L 6590124 intron CG11319 - chr2L 6590303 intron CG11319 - chr2L_12_6590001 chr2L_6590001 RAL-26 109 chr2L 6608490 6608515 chr2L 6608572 6608597 8 82 4.0 1.5 2.8 2.1 107 chr2L 6608490 intergenic not near genes chr2L 6608544 intergenic not near genes chr2L 6608597 intergenic not near genes chr2L_8_6605001 chr2L_6605001 RAL-26 110 chr2L 6655526 6655547 chr2L 6655888 6655893 5 359 2.5 4.0 3.2 1.2 367 chr2L 6655526 exon CG31633 - chr2L 6655710 exon CG31633 - chr2L 6655893 exon CG31633 - chr2L_5_6655001 chr2L_6655001 RAL-26 111 chr2L 6738694 6738715 chr2L 6738772 6738794 7 79 3.5 0.0 1.8 2.5 100 chr2L 6738694 intron TTLL3A - chr2L 6738744 intron TTLL3A - chr2L 6738794 intron TTLL3A - chr2L_7_6735001 chr2L_6735001 RAL-26 112 chr2L 6798124 6798148 chr2L 6798208 6798232 6 83 2.0 5.0 3.5 1.3 108 chr2L 6798124 intron nrv2 - chr2L 6798178 intron nrv2 - chr2L 6798232 5` UTR nrv2 - chr2L_6_6795001 chr2L_6795001 RAL-26 113 chr2L 6876772 6876810 chr2L 6882963 6883001 diver 6 6191 1.0 2.5 1.8 2.1 6229 chr2L 6876772 intron Nlg2 + chr2L 6879886 intron Nlg2 + chr2L 6883001 intron Nlg2 + chr2L_6_6875001 chr2L_6875001 RAL-26 114 chr2L 6883745 6883775 chr2L 6883831 6883861 13 84 1.5 4.5 3.0 3.2 116 chr2L 6883745 intron Nlg2 + chr2L 6883803 intron Nlg2 + chr2L 6883861 intron Nlg2 + chr2L_13_6880001 chr2L_6880001 RAL-26 115 chr2L 6891448 6891472 chr2L 6891546 6891570 4 98 1.5 2.0 1.8 1.4 122 chr2L 6891448 intron Nlg2 + chr2L 6891509 intron Nlg2 + chr2L 6891570 intron Nlg2 + chr2L_4_6890001 chr2L_6890001 RAL-26 116 chr2L 7084336 7084373 chr2L 7084428 7084465 9 92 0.0 0.5 0.2 7.5 129 chr2L 7084336 intron Pvf2 - chr2L 7084400 intron Pvf2 - chr2L 7084465 intron Pvf2 - chr2L_9_7080001 chr2L_7080001 RAL-26 117 chr2L 7101720 7101750 chr2L 7101808 7101838 9 87 2.5 1.5 2.0 3.0 118 chr2L 7101720 intron Pvf3 - chr2L 7101779 intron Pvf3 - chr2L 7101838 intron Pvf3 - chr2L_9_7100001 chr2L_7100001 RAL-26 118 chr2L 7107579 7107599 chr2L 7107668 7107689 10 90 0.0 2.0 1.0 5.0 110 chr2L 7107579 intron Pvf3 - chr2L 7107634 intron Pvf3 - chr2L 7107689 intron Pvf3 - chr2L_10_7105001 chr2L_7105001 RAL-26 119 chr2L 7111760 7111774 chr2L 7111845 7111859 6 85 1.5 0.0 0.8 3.3 99 chr2L 7111760 intron Pvf3 - chr2L 7111810 intron Pvf3 - chr2L 7111859 intron Pvf3 - chr2L_6_7110001 chr2L_7110001 RAL-26 120 chr2L 7140657 7140683 chr2L 7140741 7140768 9 84 4.0 2.5 3.2 2.1 111 chr2L 7140657 intron Pvf3 - chr2L 7140712 intron Pvf3 - chr2L 7140768 intron Pvf3 - chr2L_9_7140001 chr2L_7140001 RAL-26 121 chr2L 7343324 7343354 chr2L 7350440 7350469 roo 8 7114 6.5 4.0 5.2 1.3 7145 chr2L 7343324 intron Wnt6 + chr2L 7346896 intron Wnt6 + chr2L 7350469 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RAL-26 122 chr2L 7508377 7508388 chr2L 7508458 7508459 4 78 0.0 1.0 0.5 2.7 82 chr2L 7508377 intron RapGAP1 - chr2L 7508418 intron RapGAP1 - chr2L 7508459 intron RapGAP1 - chr2L_4_7505001 chr2L_7505001 RAL-26 123 chr2L 7567487 7567495 chr2L 7567564 7567572 6 77 4.0 1.0 2.5 1.7 85 chr2L 7567487 intron RapGAP1 - chr2L 7567530 intron RapGAP1 - chr2L 7567572 intron RapGAP1 - chr2L_6_7565001 chr2L_7565001 RAL-26 124 chr2L 7594475 7594501 chr2L 7594562 7594588 7 84 0.0 4.5 2.2 2.2 113 chr2L 7594475 intergenic not near genes chr2L 7594532 intergenic not near genes chr2L 7594588 intergenic not near genes chr2L_7_7590001 chr2L_7590001 RAL-26 125 chr2L 7600842 7600857 chr2L 7600918 7600933 7 76 3.0 1.0 2.0 2.3 91 chr2L 7600842 intergenic not near genes chr2L 7600888 intergenic not near genes chr2L 7600933 intergenic not near genes chr2L_7_7600001 chr2L_7600001 RAL-26 126 chr2L 7649899 7649928 chr2L 7649978 7649998 7 78 0.5 1.5 1.0 3.5 99 chr2L 7649899 intron Slob - chr2L 7649948 intron Slob - chr2L 7649998 intron Slob - chr2L_7_7645001 chr2L_7645001 RAL-26 127 chr2L 7653047 7653073 chr2L 7653141 7653167 7 94 3.0 0.0 1.5 2.8 120 chr2L 7653047 intron Slob - chr2L 7653107 intron Slob - chr2L 7653167 intron Slob - chr2L_7_7650001 chr2L_7650001 RAL-26 128 chr2L 7664969 7664992 chr2L 7665054 7665077 4 85 0.0 0.0 0.0 4.0 108 chr2L 7664969 intron Slob - chr2L 7665023 intron Slob - chr2L 7665077 intron Slob - chr2L_4_7665001 chr2L_7665001 RAL-26 129 chr2L 7922746 7922770 chr2L 7922827 7922851 9 81 1.5 1.5 1.5 3.6 105 chr2L 7922746 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922851 intron Snoo - chr2L_9_7920001 chr2L_7920001 RAL-26 130 chr2L 8018817 8018834 chr2L 8023601 8023618 Doc 4 4784 0.0 2.0 1.0 2.0 4801 chr2L 8018817 intron Tg + chr2L 8021218 intron Tg + chr2L 8023618 intron Tg + chr2L_4_8020001 chr2L_8020001 RAL-26 131 chr2L 8120558 8120590 chr2L 8120643 8120675 5 85 3.5 2.0 2.8 1.3 117 chr2L 8120558 exon mon2 - chr2L 8120616 intron mon2 - chr2L 8120675 intron mon2 - chr2L_5_8120001 chr2L_8120001 RAL-26 132 chr2L 8165344 8165364 chr2L 8166055 8166075 8 711 1.5 2.0 1.8 2.9 731 chr2L 8165344 intron Piezo + chr2L 8165710 intron Piezo + chr2L 8166075 intron Piezo + chr2L_8_8165001 chr2L_8165001 RAL-26 133 chr2L 8171446 8171471 chr2L 8171555 8171580 5 109 1.0 1.0 1.0 2.5 134 chr2L 8171446 intron Piezo + chr2L 8171513 intron Piezo + chr2L 8171580 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-26 134 chr2L 8253315 8253334 chr2L 8253391 8253410 6 76 2.5 1.5 2.0 2.0 95 chr2L 8253315 intron CG8086 - chr2L 8253362 intron CG8086 - chr2L 8253410 intron CG8086 - chr2L_6_8250001 chr2L_8250001 RAL-26 135 chr2L 8336517 8336549 chr2L 8336601 8336634 10 85 5.0 2.0 3.5 2.2 117 chr2L 8336517 intergenic not near genes chr2L 8336576 intergenic not near genes chr2L 8336634 intergenic not near genes chr2L_10_8335001 chr2L_8335001 RAL-26 136 chr2L 8336935 8336957 chr2L 8337014 8337036 4 79 0.0 1.5 0.8 2.2 101 chr2L 8336935 intergenic not near genes chr2L 8336986 intergenic not near genes chr2L 8337036 intergenic not near genes chr2L_4_8335001 chr2L_8335001 RAL-26 137 chr2L 8498205 8498236 chr2L 8498286 8498317 5 76 2.0 3.5 2.8 1.3 112 chr2L 8498205 intron Dh31 - chr2L 8498261 intron Dh31 - chr2L 8498317 intron Dh31 - chr2L_5_8495001 chr2L_8495001 RAL-26 138 chr2L 8723119 8723146 chr2L 8731496 8731523 Tirant 10 8377 1.0 1.0 1.0 5.0 8404 chr2L 8723119 intron raw - chr2L 8727321 intron raw - chr2L 8731523 intron raw - chr2L_10_8725001 chr2L_8725001 RAL-26 139 chr2L 8795021 8795038 chr2L 8795110 8795127 6 89 0.0 3.0 1.5 2.4 106 chr2L 8795021 intergenic not near genes chr2L 8795074 intergenic not near genes chr2L 8795127 intergenic not near genes chr2L_6_8795001 chr2L_8795001 RAL-26 140 chr2L 8834085 8834111 chr2L 8834166 8834174 7 80 2.0 0.0 1.0 3.5 89 chr2L 8834085 intergenic not near genes chr2L 8834130 intergenic not near genes chr2L 8834174 intergenic not near genes chr2L_7_8830001 chr2L_8830001 RAL-26 141 chr2L 8939672 8939696 chr2L 8939752 8939776 4 80 0.0 4.0 2.0 1.3 104 chr2L 8939672 3` UTR Tsp29Fb + chr2L 8939724 3` UTR Tsp29Fb + chr2L 8939776 intergenic CG9510 -,Tsp29Fb + chr2L_4_8935001 chr2L_8935001 RAL-26 142 chr2L 9000296 9000311 chr2L 9007806 9007821 roo 5 7510 2.0 0.0 1.0 2.5 7525 chr2L 9000296 intergenic Try29F + chr2L 9004058 intergenic not near genes chr2L 9007821 intergenic not near genes chr2L_5_9000001 chr2L_9000001 RAL-26 143 chr2L 9025821 9025854 chr2L 9025905 9025938 18 84 5.0 2.0 3.5 4.0 117 chr2L 9025821 intron,3` UTR CG9582 -,CR44352 - chr2L 9025880 intron,3` UTR CG9582 -,CR44352 - chr2L 9025938 intron,3` UTR CG9582 -,CR44352 - chr2L_18_9025001 chr2L_9025001 RAL-26 144 chr2L 9084339 9084339 chr2L 16217660 16217660 5 7133321 11.0 12.0 11.5 0.4 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-26 145 chr2L 9095571 9095600 chr2L 9095658 9095687 11 86 1.5 2.0 1.8 3.9 116 chr2L 9095571 intergenic not near genes chr2L 9095629 intergenic not near genes chr2L 9095687 intergenic not near genes chr2L_11_9095001 chr2L_9095001 RAL-26 146 chr2L 9217966 9218002 chr2L 9222753 9222789 Doc 8 4787 0.0 1.5 0.8 4.4 4823 chr2L 9217966 intron tai + chr2L 9220378 intron tai + chr2L 9222789 intron tai + chr2L_8_9220001 chr2L_9220001 RAL-26 147 chr2L 9259227 9259233 chr2L 9259320 9259326 4 93 1.0 3.0 2.0 1.3 99 chr2L 9259227 intron Ggamma30A + chr2L 9259276 intron Ggamma30A + chr2L 9259326 intron Ggamma30A + chr2L_4_9255001 chr2L_9255001 RAL-26 148 chr2L 9303368 9303495 chr2L 9303471 9303572 9 81 0.0 0.0 0.0 9.0 204 chr2L 9303368 intergenic not near genes chr2L 9303470 intergenic not near genes chr2L 9303572 intergenic not near genes chr2L_9_9300001 chr2L_9300001 RAL-26 149 chr2L 9393496 9393512 chr2L 9396463 9396479 jockey 6 2967 1.0 6.0 3.5 1.3 2983 chr2L 9393496 intron Shawl - chr2L 9394988 intron Shawl - chr2L 9396479 intron Shawl - chr2L_6_9390001 chr2L_9390001 RAL-26 150 chr2L 9399465 9399494 chr2L 9399548 9399577 4 83 1.5 1.5 1.5 1.6 112 chr2L 9399465 intron Shawl - chr2L 9399521 intron Shawl - chr2L 9399577 intron Shawl - chr2L_4_9395001 chr2L_9395001 RAL-26 151 chr2L 9618893 9618907 chr2L 9618970 9618984 5 77 1.5 0.5 1.0 2.5 91 chr2L 9618893 intron GlcAT-S + chr2L 9618938 intron GlcAT-S + chr2L 9618984 intron GlcAT-S + chr2L_5_9615001 chr2L_9615001 RAL-26 152 chr2L 9633715 9633723 chr2L 9633800 9633808 5 84 7.5 2.0 4.8 0.9 93 chr2L 9633715 intergenic Apoltp + chr2L 9633762 intergenic Apoltp + chr2L 9633808 intergenic Apoltp + chr2L_5_9630001 chr2L_9630001 RAL-26 153 chr2L 9633724 9633744 chr2L 9633799 9633828 8 83 3.5 2.0 2.8 2.1 104 chr2L 9633724 intergenic Apoltp + chr2L 9633776 intergenic Apoltp + chr2L 9633828 intergenic Apoltp + chr2L_8_9630001 chr2L_9630001 RAL-26 154 chr2L 9655885 9655910 chr2L 9655975 9655999 7 89 3.0 2.0 2.5 2.0 114 chr2L 9655885 exon Apoltp + chr2L 9655942 3` UTR Apoltp + chr2L 9655999 3` UTR Apoltp + chr2L_7_9655001 chr2L_9655001 RAL-26 155 chr2L 9693793 9693799 chr2L 9693878 9693884 4 85 5.5 1.5 3.5 0.9 91 chr2L 9693793 intron Pka-C1 - chr2L 9693838 intron Pka-C1 - chr2L 9693884 intron Pka-C1 - chr2L_4_9690001 chr2L_9690001 RAL-26 156 chr2L 9820011 9820037 chr2L 9820098 9820124 4 87 2.0 3.5 2.8 1.1 113 chr2L 9820011 intron nAChRalpha6 - chr2L 9820068 intron nAChRalpha6 - chr2L 9820124 intron nAChRalpha6 - chr2L_4_9820001 chr2L_9820001 RAL-26 157 chr2L 9973727 9973758 chr2L 9980846 9980877 HMS-Beagle 15 7119 1.5 6.0 3.8 3.1 7150 chr2L 9973727 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980877 intergenic not near genes chr2L_15_9975001 chr2L_9975001 RAL-26 158 chr2L 9982201 9982227 chr2L 9982305 9982321 4 102 0.0 2.0 1.0 2.0 120 chr2L 9982201 intergenic not near genes chr2L 9982261 intergenic not near genes chr2L 9982321 intergenic not near genes chr2L_4_9980001 chr2L_9980001 RAL-26 159 chr2L 10023070 10023102 chr2L 10023155 10023169 14 82 3.0 1.5 2.2 4.4 99 chr2L 10023070 intergenic not near genes chr2L 10023120 intergenic not near genes chr2L 10023169 intergenic not near genes chr2L_14_10020001 chr2L_10020001 RAL-26 160 chr2L 10045414 10045438 chr2L 10045494 10045518 8 80 1.0 5.0 3.0 2.0 104 chr2L 10045414 intergenic not near genes chr2L 10045466 intergenic not near genes chr2L 10045518 intergenic not near genes chr2L_8_10045001 chr2L_10045001 RAL-26 161 chr2L 10137821 10137844 chr2L 10137899 10137922 4 78 2.0 1.0 1.5 1.6 101 chr2L 10137821 intron CG44153 - chr2L 10137872 intron CG44153 - chr2L 10137922 intron CG44153 - chr2L_4_10135001 chr2L_10135001 RAL-26 162 chr2L 10153205 10153238 chr2L 10153279 10153312 14 78 1.5 2.0 1.8 5.0 107 chr2L 10153205 intron,exon CG44153 -,CG4839 + chr2L 10153258 intron,intron CG44153 -,CG4839 + chr2L 10153312 intron,intron CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 RAL-26 163 chr2L 10156341 10156354 chr2L 10163806 10163823 blood 5 7468 0.0 5.0 2.5 1.4 7482 chr2L 10156341 intron,3` UTR CG44153 -,CG4839 + chr2L 10160082 intron CG44153 - chr2L 10163823 intron CG44153 - chr2L_5_10160001 chr2L_10160001 RAL-26 164 chr2L 10407744 10407772 chr2L 10407825 10407853 4 81 0.0 0.5 0.2 3.3 109 chr2L 10407744 intron Ir31a + chr2L 10407798 intron Ir31a + chr2L 10407853 exon Ir31a + chr2L_4_10405001 chr2L_10405001 RAL-26 165 chr2L 10421291 10421309 chr2L 10421376 10421388 4 85 8.0 1.5 4.8 0.7 97 chr2L 10421291 exon pie - chr2L 10421340 exon pie - chr2L 10421388 exon pie - chr2L_4_10420001 chr2L_10420001 RAL-26 166 chr2L 10527696 10527711 chr2L 10527837 10527852 5 141 1.0 3.0 2.0 1.7 156 chr2L 10527696 5` UTR Lip4 + chr2L 10527774 5` UTR Lip4 + chr2L 10527852 exon Lip4 + chr2L_5_10525001 chr2L_10525001 RAL-26 167 chr2L 10558873 10558904 chr2L 10558956 10558987 7 83 0.0 0.0 0.0 7.0 114 chr2L 10558873 intron Trim9 + chr2L 10558930 intron Trim9 + chr2L 10558987 intron Trim9 + chr2L_7_10555001 chr2L_10555001 RAL-26 168 chr2L 10574574 10574602 chr2L 10574671 10574699 4 97 1.5 1.5 1.5 1.6 125 chr2L 10574574 intron Trim9 + chr2L 10574636 intron Trim9 + chr2L 10574699 intron Trim9 + chr2L_4_10570001 chr2L_10570001 RAL-26 169 chr2L 10586511 10586540 chr2L 10586593 10586622 11 82 3.0 4.0 3.5 2.4 111 chr2L 10586511 intron Trim9 + chr2L 10586566 intron Trim9 + chr2L 10586622 intron Trim9 + chr2L_11_10585001 chr2L_10585001 RAL-26 170 chr2L 10592842 10592874 chr2L 10600504 10600536 opus 5 7661 0.5 1.0 0.8 2.8 7694 chr2L 10592842 intron Trim9 + chr2L 10596689 intron Trim9 + chr2L 10600536 intron Trim9 + chr2L_5_10595001 chr2L_10595001 RAL-26 171 chr2L 10621117 10621150 chr2L 10621200 10621233 9 83 2.0 2.5 2.2 2.8 116 chr2L 10621117 intron Trim9 + chr2L 10621175 intron Trim9 + chr2L 10621233 intron Trim9 + chr2L_9_10620001 chr2L_10620001 RAL-26 172 chr2L 10647673 10647683 chr2L 10648114 10648122 4 440 18.5 23.5 21.0 0.2 449 chr2L 10647673 exon CG17097 + chr2L 10647898 exon CG17097 + chr2L 10648122 exon CG17097 + chr2L_4_10645001 chr2L_10645001 RAL-26 173 chr2L 10705448 10705479 chr2L 10705531 10705562 9 81 2.0 2.0 2.0 3.0 114 chr2L 10705448 exon Lip2 - chr2L 10705505 intron Lip2 - chr2L 10705562 intron Lip2 - chr2L_9_10705001 chr2L_10705001 RAL-26 174 chr2L 10787897 10787909 chr2L 10787973 10787985 5 76 1.5 1.0 1.2 2.3 88 chr2L 10787897 intron CG31869 - chr2L 10787941 intron CG31869 - chr2L 10787985 intron CG31869 - chr2L_5_10785001 chr2L_10785001 RAL-26 175 chr2L 10862842 10862871 chr2L 10864456 10864485 Rt1c 9 1614 5.0 5.5 5.2 1.5 1643 chr2L 10862842 3` UTR CR43807 - chr2L 10863664 intron CR43807 - chr2L 10864485 3` UTR CR43807 - chr2L_9_10860001 chr2L_10860001 RAL-26 176 chr2L 10873412 10873423 chr2L 10873489 10873500 7 77 0.5 0.0 0.2 5.8 88 chr2L 10873412 intergenic not near genes chr2L 10873456 intergenic not near genes chr2L 10873500 intergenic not near genes chr2L_7_10870001 chr2L_10870001 RAL-26 177 chr2L 10946949 10946976 chr2L 10956164 10956191 roo 9 9214 4.5 7.5 6.0 1.3 9242 chr2L 10946949 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-26 178 chr2L 11169478 11169501 chr2L 11169613 11169636 6 135 1.5 1.5 1.5 2.4 158 chr2L 11169478 intron Ca-beta - chr2L 11169557 intron Ca-beta - chr2L 11169636 intron Ca-beta - chr2L_6_11165001 chr2L_11165001 RAL-26 179 chr2L 11189246 11189253 chr2L 11189343 11189350 4 95 2.0 0.0 1.0 2.0 104 chr2L 11189246 intron Ca-beta - chr2L 11189298 intron Ca-beta - chr2L 11189350 intron Ca-beta - chr2L_4_11185001 chr2L_11185001 RAL-26 180 chr2L 11248574 11248590 chr2L 11248657 11248662 11 81 6.5 4.5 5.5 1.7 88 chr2L 11248574 intron ab + chr2L 11248618 intron ab + chr2L 11248662 intron ab + chr2L_11_11245001 chr2L_11245001 RAL-26 181 chr2L 11253333 11253359 chr2L 11253414 11253440 6 81 3.0 2.5 2.8 1.6 107 chr2L 11253333 intron ab + chr2L 11253386 intron ab + chr2L 11253440 intron ab + chr2L_6_11250001 chr2L_11250001 RAL-26 182 chr2L 11537756 11537783 chr2L 11537873 11537900 6 117 1.0 1.0 1.0 3.0 144 chr2L 11537756 intergenic not near genes chr2L 11537828 intergenic not near genes chr2L 11537900 intergenic not near genes chr2L_6_11535001 chr2L_11535001 RAL-26 183 chr2L 11540593 11540613 chr2L 11547994 11548015 Tabor 5 7401 0.0 1.0 0.5 3.3 7422 chr2L 11540593 intergenic not near genes chr2L 11544304 intergenic not near genes chr2L 11548015 intergenic not near genes chr2L_5_11540001 chr2L_11540001 RAL-26 184 chr2L 11563641 11563670 chr2L 11568845 11568874 copia 5 5204 3.5 3.0 3.2 1.2 5233 chr2L 11563641 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568874 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-26 185 chr2L 11614058 11614080 chr2L 11615553 11615570 hopper2 4 1491 2.5 5.5 4.0 0.8 1512 chr2L 11614058 intron kek2 + chr2L 11614814 intron kek2 + chr2L 11615570 intron kek2 + chr2L_4_11610001 chr2L_11610001 RAL-26 186 chr2L 11633191 11633196 chr2L 11633268 11633293 4 94 5.0 4.0 4.5 0.7 102 chr2L 11633191 intergenic not near genes chr2L 11633242 intergenic not near genes chr2L 11633293 intergenic not near genes chr2L_4_11630001 chr2L_11630001 RAL-26 187 chr2L 11689929 11689960 chr2L 11690137 11690168 11 208 3.5 1.0 2.2 3.4 239 chr2L 11689929 intergenic not near genes chr2L 11690048 intergenic not near genes chr2L 11690168 intergenic not near genes chr2L_11_11690001 chr2L_11690001 RAL-26 188 chr2L 11710518 11710531 chr2L 11710601 11710614 5 82 1.0 8.0 4.5 0.9 96 chr2L 11710518 intergenic not near genes chr2L 11710566 intergenic not near genes chr2L 11710614 intergenic not near genes chr2L_5_11710001 chr2L_11710001 RAL-26 189 chr2L 11713510 11713535 chr2L 11720978 11721003 blood 4 7468 1.5 2.5 2.0 1.3 7493 chr2L 11713510 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721003 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-26 190 chr2L 11752864 11752890 chr2L 11753154 11753180 6 290 5.5 2.0 3.8 1.2 316 chr2L 11752864 intergenic CG42470 - chr2L 11753022 3` UTR CG42470 - chr2L 11753180 3` UTR CG42470 - chr2L_6_11750001 chr2L_11750001 RAL-26 191 chr2L 11821472 11821489 chr2L 11821572 11821589 6 99 2.0 5.0 3.5 1.3 117 chr2L 11821472 intron Pde1c - chr2L 11821530 intron Pde1c - chr2L 11821589 intron Pde1c - chr2L_6_11820001 chr2L_11820001 RAL-26 192 chr2L 11828441 11828461 chr2L 11828517 11828537 8 76 0.5 4.0 2.2 2.5 96 chr2L 11828441 intron,intron Pde1c -,esc - chr2L 11828489 intron,intron Pde1c -,esc - chr2L 11828537 intron,intron Pde1c -,esc - chr2L_8_11825001 chr2L_11825001 RAL-26 193 chr2L 11892543 11892804 chr2L 11892637 11892895 6 92 5.0 3.0 4.0 1.2 352 chr2L 11892543 intron Pde1c - chr2L 11892719 intron Pde1c - chr2L 11892895 intron Pde1c - chr2L_6_11890001 chr2L_11890001 RAL-26 194 chr2L 11925597 11925617 chr2L 11925686 11925705 4 88 2.5 2.5 2.5 1.1 108 chr2L 11925597 5` UTR Pde1c - chr2L 11925651 5` UTR Pde1c - chr2L 11925705 5` UTR Pde1c - chr2L_4_11925001 chr2L_11925001 RAL-26 195 chr2L 12131478 12131495 chr2L 12131574 12131591 5 96 2.5 3.5 3.0 1.2 113 chr2L 12131478 intron rho-6 - chr2L 12131534 intron rho-6 - chr2L 12131591 intron rho-6 - chr2L_5_12130001 chr2L_12130001 RAL-26 196 chr2L 12233776 12233809 chr2L 12233853 12233886 5 77 1.5 1.0 1.2 2.3 110 chr2L 12233776 intron aret + chr2L 12233831 intron aret + chr2L 12233886 intron aret + chr2L_5_12230001 chr2L_12230001 RAL-26 197 chr2L 12237004 12237036 chr2L 12237089 12237121 9 85 2.0 2.5 2.2 2.8 117 chr2L 12237004 intron aret + chr2L 12237062 intron aret + chr2L 12237121 intron aret + chr2L_9_12235001 chr2L_12235001 RAL-26 198 chr2L 12239060 12239080 chr2L 12239148 12239168 5 88 2.0 2.5 2.2 1.6 108 chr2L 12239060 intron aret + chr2L 12239114 intron aret + chr2L 12239168 intron aret + chr2L_5_12235001 chr2L_12235001 RAL-26 199 chr2L 12337282 12337316 chr2L 12337370 12337404 5 84 2.0 0.0 1.0 2.5 122 chr2L 12337282 intergenic not near genes chr2L 12337343 intergenic not near genes chr2L 12337404 intergenic not near genes chr2L_5_12335001 chr2L_12335001 RAL-26 200 chr2L 12418878 12418888 chr2L 12418973 12418983 5 95 0.0 0.0 0.0 5.0 105 chr2L 12418878 intron vir-1 - chr2L 12418930 intron vir-1 - chr2L 12418983 intron vir-1 - chr2L_5_12415001 chr2L_12415001 RAL-26 201 chr2L 12487889 12487917 chr2L 12487970 12487998 4 81 2.5 1.5 2.0 1.3 109 chr2L 12487889 intron bun - chr2L 12487944 intron bun - chr2L 12487998 intron bun - chr2L_4_12485001 chr2L_12485001 RAL-26 202 chr2L 12558324 12558353 chr2L 12565453 12565477 HMS-Beagle 6 7128 0.0 0.0 0.0 6.0 7153 chr2L 12558324 intergenic not near genes chr2L 12561900 intergenic not near genes chr2L 12565477 intergenic not near genes chr2L_6_12560001 chr2L_12560001 RAL-26 203 chr2L 12677785 12677791 chr2L 12677866 12677872 4 81 2.0 1.5 1.8 1.4 87 chr2L 12677785 intron pdm2 + chr2L 12677828 intron pdm2 + chr2L 12677872 intron pdm2 + chr2L_4_12675001 chr2L_12675001 RAL-26 204 chr2L 12677128 12677161 chr2L 12681641 12681676 8 4515 15.5 22.0 18.8 0.4 4548 chr2L 12677128 intron pdm2 + chr2L 12679402 intron pdm2 + chr2L 12681676 intron pdm2 + chr2L_8_12675001 chr2L_12675001 RAL-26 205 chr2L 12693852 12693873 chr2L 12693929 12693950 6 77 2.5 0.0 1.2 2.7 98 chr2L 12693852 3` UTR CG6153 + chr2L 12693901 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693950 3` UTR CG5780 - chr2L_6_12690001 chr2L_12690001 RAL-26 206 chr2L 12728923 12728941 chr2L 12729166 12729184 pogo 8 243 1.5 3.5 2.5 2.3 261 chr2L 12728923 intron MRP + chr2L 12729054 intron MRP + chr2L 12729184 exon MRP + chr2L_8_12725001 chr2L_12725001 RAL-26 207 chr2L 12731055 12731090 chr2L 12735822 12735857 F-element 10 4767 2.5 1.5 2.0 3.3 4802 chr2L 12731055 intron MRP + chr2L 12733456 intron MRP + chr2L 12735857 intron MRP + chr2L_10_12730001 chr2L_12730001 RAL-26 208 chr2L 12754943 12754951 chr2L 12755020 12755028 5 75 1.5 0.0 0.8 2.8 85 chr2L 12754943 intergenic not near genes chr2L 12754986 intergenic not near genes chr2L 12755028 intergenic not near genes chr2L_5_12750001 chr2L_12750001 RAL-26 209 chr2L 12861696 12861730 chr2L 12863163 12863197 hobo 16 1466 3.0 2.0 2.5 4.6 1501 chr2L 12861696 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863197 intergenic not near genes chr2L_16_12860001 chr2L_12860001 RAL-26 210 chr2L 12894020 12894045 chr2L 12895487 12895512 hobo 7 1467 7.0 0.5 3.8 1.5 1492 chr2L 12894020 intergenic not near genes chr2L 12894766 intergenic not near genes chr2L 12895512 intergenic not near genes chr2L_7_12890001 chr2L_12890001 RAL-26 211 chr2L 12895493 12895511 chr2L 12895744 12895771 6 258 0.0 2.0 1.0 3.0 278 chr2L 12895493 intergenic not near genes chr2L 12895632 intergenic not near genes chr2L 12895771 intergenic not near genes chr2L_6_12895001 chr2L_12895001 RAL-26 212 chr2L 12896812 12896839 chr2L 12896901 12896928 4 86 2.0 1.0 1.5 1.6 116 chr2L 12896812 intergenic not near genes chr2L 12896870 intergenic not near genes chr2L 12896928 intergenic not near genes chr2L_4_12895001 chr2L_12895001 RAL-26 213 chr2L 12933848 12933883 chr2L 12941315 12941350 blood 9 7467 3.5 5.0 4.2 1.7 7502 chr2L 12933848 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941350 intergenic not near genes chr2L_9_12935001 chr2L_12935001 RAL-26 214 chr2L 13036245 13036271 chr2L 13036486 13036513 X-element 4 242 0.5 1.5 1.0 2.0 268 chr2L 13036245 intron CG9932 - chr2L 13036379 intron CG9932 - chr2L 13036513 intron CG9932 - chr2L_4_13035001 chr2L_13035001 RAL-26 215 chr2L 13147753 13147775 chr2L 13147824 13147851 4 75 4.0 4.0 4.0 0.8 98 chr2L 13147753 intergenic not near genes chr2L 13147802 intergenic not near genes chr2L 13147851 intergenic not near genes chr2L_4_13145001 chr2L_13145001 RAL-26 216 chr2L 13398721 13398745 chr2L 13398801 13398825 4 80 0.5 1.0 0.8 2.2 104 chr2L 13398721 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398773 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398825 intergenic CR44600 -,CG10859 -,CG7110 + chr2L_4_13395001 chr2L_13395001 RAL-26 217 chr2L 13405646 13405671 chr2L 13410443 13410468 Doc 10 4797 4.5 3.0 3.8 2.1 4822 chr2L 13405646 exon CG7110 + chr2L 13408057 intron CG7110 + chr2L 13410468 intron CG7110 + chr2L_10_13405001 chr2L_13405001 RAL-26 218 chr2L 13421919 13421946 chr2L 13421997 13422024 5 78 0.5 2.0 1.2 2.3 105 chr2L 13421919 intron CG42784 + chr2L 13421972 intron CG42784 + chr2L 13422024 intron CG42784 + chr2L_5_13420001 chr2L_13420001 RAL-26 219 chr2L 13481449 13481476 chr2L 13482056 13482069 jockey 6 605 2.0 5.5 3.8 1.2 620 chr2L 13481449 intron CG42784 + chr2L 13481759 intron CG42784 + chr2L 13482069 intron CG42784 + chr2L_6_13480001 chr2L_13480001 RAL-26 220 chr2L 13492426 13492458 chr2L 13492545 13492576 12 118 3.5 3.0 3.2 2.9 150 chr2L 13492426 intron CG42784 + chr2L 13492501 intron CG42784 + chr2L 13492576 intron CG42784 + chr2L_12_13490001 chr2L_13490001 RAL-26 221 chr2L 13600381 13600402 chr2L 13600641 13600662 6 260 0.0 3.0 1.5 2.4 281 chr2L 13600381 intron kuz + chr2L 13600522 intron kuz + chr2L 13600662 intron kuz + chr2L_6_13600001 chr2L_13600001 RAL-26 222 chr2L 13626107 13626130 chr2L 13626190 13626213 7 82 3.0 3.5 3.2 1.7 106 chr2L 13626107 intron kuz + chr2L 13626160 intron kuz + chr2L 13626213 intron kuz + chr2L_7_13625001 chr2L_13625001 RAL-26 223 chr2L 13628823 13628849 chr2L 13628899 13628927 6 78 0.0 2.0 1.0 3.0 104 chr2L 13628823 intron kuz + chr2L 13628875 intron kuz + chr2L 13628927 intron kuz + chr2L_6_13625001 chr2L_13625001 RAL-26 224 chr2L 13673682 13673709 chr2L 13673763 13673790 6 81 1.0 1.0 1.0 3.0 108 chr2L 13673682 intergenic not near genes chr2L 13673736 intergenic not near genes chr2L 13673790 intergenic not near genes chr2L_6_13670001 chr2L_13670001 RAL-26 225 chr2L 13752691 13752725 chr2L 13752858 13752892 9 167 2.0 2.5 2.2 2.8 201 chr2L 13752691 intron,intron CR44846 +,TM9SF4 + chr2L 13752792 intron,intron CR44846 +,TM9SF4 + chr2L 13752892 intron,intron CR44846 +,TM9SF4 + chr2L_9_13750001 chr2L_13750001 RAL-26 226 chr2L 13761809 13761835 chr2L 13762918 13762946 Doc 5 1110 3.0 3.0 3.0 1.2 1137 chr2L 13761809 intron TM9SF4 + chr2L 13762378 intron TM9SF4 + chr2L 13762946 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-26 227 chr2L 13853082 13853116 chr2L 13862232 13862262 roo 5 9149 1.0 1.5 1.2 2.3 9180 chr2L 13853082 intron CenG1A + chr2L 13857672 intron CenG1A + chr2L 13862262 intron CenG1A + chr2L_5_13855001 chr2L_13855001 RAL-26 228 chr2L 13892006 13892022 chr2L 13892185 13892201 7 177 2.5 5.5 4.0 1.4 195 chr2L 13892006 intron CenG1A + chr2L 13892104 intron CenG1A + chr2L 13892201 intron CenG1A + chr2L_7_13890001 chr2L_13890001 RAL-26 229 chr2L 13928407 13928415 chr2L 13928539 13928547 6 132 5.0 2.0 3.5 1.3 140 chr2L 13928407 intron Ance-3 + chr2L 13928477 intron Ance-3 + chr2L 13928547 intron Ance-3 + chr2L_6_13925001 chr2L_13925001 RAL-26 230 chr2L 13960169 13960190 chr2L 13960250 13960271 7 81 5.5 4.0 4.8 1.2 102 chr2L 13960169 intron NimA + chr2L 13960220 intron NimA + chr2L 13960271 intron NimA + chr2L_7_13960001 chr2L_13960001 RAL-26 231 chr2L 14017226 14017241 chr2L 14017595 14017615 6 368 0.0 5.0 2.5 1.7 389 chr2L 14017226 intron bgm + chr2L 14017420 intron bgm + chr2L 14017615 intron bgm + chr2L_6_14015001 chr2L_14015001 RAL-26 232 chr2L 14180073 14180091 chr2L 14180149 14180167 8 76 1.0 2.5 1.8 2.9 94 chr2L 14180073 intron CG43333 - chr2L 14180120 intron CG43333 - chr2L 14180167 intron CG43333 - chr2L_8_14180001 chr2L_14180001 RAL-26 233 chr2L 14271040 14271067 chr2L 14271117 14271144 10 77 3.5 2.0 2.8 2.6 104 chr2L 14271040 intron wb + chr2L 14271092 intron wb + chr2L 14271144 intron wb + chr2L_10_14270001 chr2L_14270001 RAL-26 234 chr2L 14333919 14333926 chr2L 14334019 14334026 4 100 1.5 3.5 2.5 1.1 107 chr2L 14333919 intergenic ms(2)34Fe +,CG33090 + chr2L 14333972 intergenic ms(2)34Fe +,CG33090 + chr2L 14334026 intergenic CG33090 +,ms(2)34Fe + chr2L_4_14330001 chr2L_14330001 RAL-26 235 chr2L 14378657 14378676 chr2L 14378736 14378755 4 79 0.0 0.0 0.0 4.0 98 chr2L 14378657 3` UTR ppk - chr2L 14378706 3` UTR ppk - chr2L 14378755 3` UTR ppk - chr2L_4_14375001 chr2L_14375001 RAL-26 236 chr2L 14781561 14781590 chr2L 14781662 14781691 8 101 1.0 1.5 1.2 3.6 130 chr2L 14781561 intergenic not near genes chr2L 14781626 intergenic not near genes chr2L 14781691 intergenic not near genes chr2L_8_14780001 chr2L_14780001 RAL-26 237 chr2L 14803882 14803910 chr2L 14809085 14809113 copia 7 5203 1.5 4.0 2.8 1.8 5231 chr2L 14803882 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809113 intergenic not near genes chr2L_7_14805001 chr2L_14805001 RAL-26 238 chr2L 14840981 14841010 chr2L 14841068 14841097 5 87 0.0 2.0 1.0 2.5 116 chr2L 14840981 3` UTR CR43805 - chr2L 14841039 3` UTR CR43805 - chr2L 14841097 3` UTR CR43805 - chr2L_5_14840001 chr2L_14840001 RAL-26 239 chr2L 14842418 14842438 chr2L 14842502 14842522 4 84 2.5 2.0 2.2 1.2 104 chr2L 14842418 exon CG42682 + chr2L 14842470 intron CG42682 + chr2L 14842522 intron CG42682 + chr2L_4_14840001 chr2L_14840001 RAL-26 240 chr2L 14889952 14889978 chr2L 14890377 14890403 jockey 6 425 1.5 1.0 1.2 2.7 451 chr2L 14889952 intergenic not near genes chr2L 14890178 intergenic not near genes chr2L 14890403 intergenic not near genes chr2L_6_14890001 chr2L_14890001 RAL-26 241 chr2L 15026020 15026052 chr2L 15026101 15026133 9 81 2.5 3.5 3.0 2.2 113 chr2L 15026020 exon GABA-B-R1 + chr2L 15026076 intron GABA-B-R1 + chr2L 15026133 intron GABA-B-R1 + chr2L_9_15025001 chr2L_15025001 RAL-26 242 chr2L 15087761 15087771 chr2L 15087871 15087881 7 110 1.0 2.5 1.8 2.5 120 chr2L 15087761 intron CG15270 + chr2L 15087821 intron CG15270 + chr2L 15087881 intron CG15270 + chr2L_7_15085001 chr2L_15085001 RAL-26 243 chr2L 15121758 15121769 chr2L 15121874 15121878 4 114 9.5 4.5 7.0 0.5 120 chr2L 15121758 intergenic not near genes chr2L 15121818 intergenic not near genes chr2L 15121878 intergenic not near genes chr2L_4_15120001 chr2L_15120001 RAL-26 244 chr2L 15127766 15127800 chr2L 15127852 15127886 18 84 5.0 5.0 5.0 3.0 120 chr2L 15127766 intergenic not near genes chr2L 15127826 intergenic not near genes chr2L 15127886 intergenic not near genes chr2L_18_15125001 chr2L_15125001 RAL-26 245 chr2L 15138799 15138803 chr2L 15138886 15138890 5 87 0.0 2.5 1.2 2.3 91 chr2L 15138799 intergenic not near genes chr2L 15138844 intergenic not near genes chr2L 15138890 intergenic not near genes chr2L_5_15135001 chr2L_15135001 RAL-26 246 chr2L 15226373 15226394 chr2L 15226449 15226459 7 73 1.5 1.0 1.2 3.2 86 chr2L 15226373 intergenic not near genes chr2L 15226416 intergenic not near genes chr2L 15226459 intergenic not near genes chr2L_7_15225001 chr2L_15225001 RAL-26 247 chr2L 15319789 15319818 chr2L 15319869 15319890 12 78 0.5 4.0 2.2 3.8 101 chr2L 15319789 intergenic not near genes chr2L 15319840 intergenic not near genes chr2L 15319890 intergenic not near genes chr2L_12_15315001 chr2L_15315001 RAL-26 248 chr2L 15324600 15324623 chr2L 15324678 15324700 7 77 5.5 6.0 5.8 1.0 100 chr2L 15324600 intergenic not near genes chr2L 15324650 intergenic not near genes chr2L 15324700 intergenic not near genes chr2L_7_15320001 chr2L_15320001 RAL-26 249 chr2L 15342342 15342379 chr2L 15342424 15342461 7 82 1.5 2.5 2.0 2.3 119 chr2L 15342342 intergenic not near genes chr2L 15342402 intergenic not near genes chr2L 15342461 intergenic not near genes chr2L_7_15340001 chr2L_15340001 RAL-26 250 chr2L 15446049 15446078 chr2L 15453518 15453547 blood 9 7468 3.0 0.0 1.5 3.6 7498 chr2L 15446049 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453547 intergenic not near genes chr2L_9_15445001 chr2L_15445001 RAL-26 251 chr2L 15521632 15521647 chr2L 15521715 15521730 4 83 2.5 1.0 1.8 1.4 98 chr2L 15521632 intergenic CR43761 + chr2L 15521681 intergenic CR43761 + chr2L 15521730 intergenic CR43761 + chr2L_4_15520001 chr2L_15520001 RAL-26 252 chr2L 15553360 15553385 chr2L 15553507 15553532 5 145 2.5 2.0 2.2 1.6 172 chr2L 15553360 intron kek3 + chr2L 15553446 intron kek3 + chr2L 15553532 intron kek3 + chr2L_5_15550001 chr2L_15550001 RAL-26 253 chr2L 15783431 15783454 chr2L 15783508 15783531 10 76 5.0 1.0 3.0 2.5 100 chr2L 15783431 intergenic not near genes chr2L 15783481 intergenic not near genes chr2L 15783531 intergenic not near genes chr2L_10_15780001 chr2L_15780001 RAL-26 254 chr2L 15906183 15906212 chr2L 15906272 15906301 5 89 1.0 1.5 1.2 2.3 118 chr2L 15906183 intron beat-Ib - chr2L 15906242 intron beat-Ib - chr2L 15906301 intron beat-Ib - chr2L_5_15905001 chr2L_15905001 RAL-26 255 chr2L 15956024 15956033 chr2L 15957491 15957500 hobo 4 1467 5.5 1.5 3.5 0.9 1476 chr2L 15956024 intron beat-Ib - chr2L 15956762 intron beat-Ib - chr2L 15957500 intron beat-Ib - chr2L_4_15955001 chr2L_15955001 RAL-26 256 chr2L 15988041 15988067 chr2L 15988129 15988135 4 82 1.0 3.5 2.2 1.2 94 chr2L 15988041 intergenic not near genes chr2L 15988088 intergenic not near genes chr2L 15988135 intergenic not near genes chr2L_4_15985001 chr2L_15985001 RAL-26 257 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 6 145889 21.5 12.0 16.8 0.3 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-26 258 chr2L 16081921 16081952 chr2L 16082020 16082051 9 99 2.5 1.0 1.8 3.2 130 chr2L 16081921 intergenic beat-Ia + chr2L 16081986 intergenic beat-Ia + chr2L 16082051 intergenic beat-Ia + chr2L_9_16080001 chr2L_16080001 RAL-26 259 chr2L 16098920 16098947 chr2L 16099008 16099035 10 88 0.0 1.5 0.8 5.6 115 chr2L 16098920 intergenic not near genes chr2L 16098978 intergenic not near genes chr2L 16099035 intergenic not near genes chr2L_10_16095001 chr2L_16095001 RAL-26 260 chr2L 16141173 16141188 chr2L 16146369 16146395 copia 5 5205 4.0 1.0 2.5 1.4 5222 chr2L 16141173 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146395 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-26 261 chr2L 16210501 16210512 chr2L 16210580 16210591 6 79 0.5 4.5 2.5 1.7 90 chr2L 16210501 intergenic not near genes chr2L 16210546 intergenic not near genes chr2L 16210591 intergenic not near genes chr2L_6_16210001 chr2L_16210001 RAL-26 262 chr2L 9084338 9084340 chr2L 16217660 16217660 8 7133320 11.0 12.0 11.5 0.6 7133322 chr2L 9084338 intron Toll-4 + chr2L 12650999 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-26 263 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 8 145889 21.5 12.0 16.8 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_16140001 chr2L_16140001 RAL-26 264 chr2L 16280251 16280285 chr2L 16281419 16281453 1360 10 1166 7.0 3.0 5.0 1.7 1202 chr2L 16280251 intron crp - chr2L 16280852 intron crp - chr2L 16281453 intron crp - chr2L_10_16280001 chr2L_16280001 RAL-26 265 chr2L 16298729 16298744 chr2L 16298808 16298823 4 79 2.0 2.5 2.2 1.2 94 chr2L 16298729 intron heix - chr2L 16298776 intron heix - chr2L 16298823 intron heix - chr2L_4_16295001 chr2L_16295001 RAL-26 266 chr2L 16329531 16329551 chr2L 16329610 16329630 6 79 0.5 0.0 0.2 5.0 99 chr2L 16329531 intergenic CG4440 +,mRpL4 - chr2L 16329580 intergenic CG4440 +,mRpL4 - chr2L 16329630 intergenic CG4440 +,mRpL4 - chr2L_6_16325001 chr2L_16325001 RAL-26 267 chr2L 16621619 16621644 chr2L 16621697 16621721 5 78 1.0 3.0 2.0 1.7 102 chr2L 16621619 intron CG42389 + chr2L 16621670 intron CG42389 + chr2L 16621721 intron CG42389 + chr2L_5_16620001 chr2L_16620001 RAL-26 268 chr2L 16695130 16695140 chr2L 16695213 16695223 4 83 3.0 2.5 2.8 1.1 93 chr2L 16695130 intron grp + chr2L 16695176 intron grp + chr2L 16695223 intron grp + chr2L_4_16695001 chr2L_16695001 RAL-26 269 chr2L 16701458 16701486 chr2L 16701537 16701565 8 79 3.0 2.5 2.8 2.1 107 chr2L 16701458 intergenic not near genes chr2L 16701512 intergenic not near genes chr2L 16701565 intergenic not near genes chr2L_8_16700001 chr2L_16700001 RAL-26 270 chr2L 16939998 16940009 chr2L 16940076 16940082 4 77 2.5 4.0 3.2 1.0 84 chr2L 16939998 intergenic not near genes chr2L 16940040 intergenic not near genes chr2L 16940082 intergenic not near genes chr2L_4_16940001 chr2L_16940001 RAL-26 271 chr2L 16968242 16968262 chr2L 16968332 16968352 5 90 0.5 2.0 1.2 2.3 110 chr2L 16968242 intergenic not near genes chr2L 16968297 intergenic not near genes chr2L 16968352 intergenic not near genes chr2L_5_16965001 chr2L_16965001 RAL-26 272 chr2L 17000123 17000150 chr2L 17000245 17000272 9 122 1.0 2.5 1.8 3.2 149 chr2L 17000123 intergenic not near genes chr2L 17000198 intergenic not near genes chr2L 17000272 intergenic not near genes chr2L_9_17000001 chr2L_17000001 RAL-26 273 chr2L 17088842 17088872 chr2L 17088926 17088956 8 84 1.0 3.0 2.0 2.7 114 chr2L 17088842 3` UTR CG12620 + chr2L 17088899 3` UTR CG12620 + chr2L 17088956 3` UTR CG12620 + chr2L_8_17085001 chr2L_17085001 RAL-26 274 chr2L 17181466 17181476 chr2L 17181550 17181560 4 84 0.0 1.5 0.8 2.2 94 chr2L 17181466 intron Gr36c + chr2L 17181513 exon Gr36c + chr2L 17181560 exon Gr36c + chr2L_4_17180001 chr2L_17180001 RAL-26 275 chr2L 17273201 17273229 chr2L 17277984 17278011 F-element 7 4783 5.0 3.0 4.0 1.4 4810 chr2L 17273201 intergenic not near genes chr2L 17275606 intergenic not near genes chr2L 17278011 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-26 276 chr2L 17879999 17880031 chr2L 17880086 17880117 8 86 1.5 3.0 2.2 2.5 118 chr2L 17879999 intergenic not near genes chr2L 17880058 intergenic not near genes chr2L 17880117 intergenic not near genes chr2L_8_17880001 chr2L_17880001 RAL-26 277 chr2L 17911965 17911987 chr2L 17914143 17914164 pogo 7 2178 1.5 2.0 1.8 2.5 2199 chr2L 17911965 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914164 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-26 278 chr2L 17951944 17951971 chr2L 17953411 17953438 hobo 4 1467 3.5 1.5 2.5 1.1 1494 chr2L 17951944 intergenic CR44398 -,CR44397 - chr2L 17952691 intergenic not near genes chr2L 17953438 intergenic not near genes chr2L_4_17950001 chr2L_17950001 RAL-26 279 chr2L 18044245 18044268 chr2L 18044573 18044596 4 328 1.0 0.0 0.5 2.7 351 chr2L 18044245 intron rdo + chr2L 18044420 intron rdo + chr2L 18044596 intron rdo + chr2L_4_18040001 chr2L_18040001 RAL-26 280 chr2L 18121647 18121675 chr2L 18121793 18121806 5 143 3.5 2.0 2.8 1.3 159 chr2L 18121647 intron CG5758 + chr2L 18121726 intron CG5758 + chr2L 18121806 intron CG5758 + chr2L_5_18120001 chr2L_18120001 RAL-26 281 chr2L 18254812 18254835 chr2L 18254912 18254935 5 100 2.5 1.0 1.8 1.8 123 chr2L 18254812 intron CG42750 - chr2L 18254874 intron CG42750 - chr2L 18254935 intron CG42750 - chr2L_5_18250001 chr2L_18250001 RAL-26 282 chr2L 18274040 18274070 chr2L 18274126 18274156 5 86 3.0 1.5 2.2 1.6 116 chr2L 18274040 intron CG42750 - chr2L 18274098 intron CG42750 - chr2L 18274156 intron CG42750 - chr2L_5_18270001 chr2L_18270001 RAL-26 283 chr2L 18408024 18408043 chr2L 18412807 18412827 Doc 4 4784 3.0 0.0 1.5 1.6 4803 chr2L 18408024 intergenic not near genes chr2L 18410426 intergenic not near genes chr2L 18412827 intergenic not near genes chr2L_4_18410001 chr2L_18410001 RAL-26 284 chr2L 18659943 18659958 chr2L 18660027 18660042 5 83 0.5 3.0 1.8 1.8 99 chr2L 18659943 intron MESR3 + chr2L 18659992 intron MESR3 + chr2L 18660042 intron MESR3 + chr2L_5_18655001 chr2L_18655001 RAL-26 285 chr2L 18898400 18898422 chr2L 18898482 18898504 9 82 3.5 0.5 2.0 3.0 104 chr2L 18898400 intergenic not near genes chr2L 18898452 intergenic not near genes chr2L 18898504 intergenic not near genes chr2L_9_18895001 chr2L_18895001 RAL-26 286 chr2L 18981758 18981775 chr2L 18981835 18981849 4 76 2.0 5.0 3.5 0.9 91 chr2L 18981758 intron Swip-1 - chr2L 18981804 intron Swip-1 - chr2L 18981849 intron Swip-1 - chr2L_4_18980001 chr2L_18980001 RAL-26 287 chr2L 19070266 19070300 chr2L 19070359 19070393 6 89 3.5 0.5 2.0 2.0 127 chr2L 19070266 intergenic CG10702 - chr2L 19070330 intergenic CG10702 - chr2L 19070393 intergenic not near genes chr2L_6_19070001 chr2L_19070001 RAL-26 288 chr2L 19147371 19147401 chr2L 19154406 19154436 297 6 7035 3.5 1.0 2.2 1.9 7065 chr2L 19147371 intron brat + chr2L 19150904 intron brat + chr2L 19154436 intron brat + chr2L_6_19150001 chr2L_19150001 RAL-26 289 chr2L 19199669 19199698 chr2L 19199746 19199760 11 75 3.0 1.5 2.2 3.4 91 chr2L 19199669 intron drl + chr2L 19199714 intron drl + chr2L 19199760 intron drl + chr2L_11_19195001 chr2L_19195001 RAL-26 290 chr2L 19209615 19209631 chr2L 19209700 19209712 4 84 2.5 1.0 1.8 1.4 97 chr2L 19209615 intergenic not near genes chr2L 19209664 intergenic not near genes chr2L 19209712 intergenic not near genes chr2L_4_19205001 chr2L_19205001 RAL-26 291 chr2L 19237304 19237331 chr2L 19237404 19237431 7 100 1.0 2.5 1.8 2.5 127 chr2L 19237304 intergenic not near genes chr2L 19237368 intergenic not near genes chr2L 19237431 intergenic not near genes chr2L_7_19235001 chr2L_19235001 RAL-26 292 chr2L 19345018 19345043 chr2L 19357227 19357252 blood 6 12209 2.5 3.5 3.0 1.5 12234 chr2L 19345018 intron dnt - chr2L 19351135 intron dnt - chr2L 19357252 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-26 293 chr2L 19357548 19357565 chr2L 19357638 19357655 5 90 3.0 2.0 2.5 1.4 107 chr2L 19357548 intron dnt - chr2L 19357602 intron dnt - chr2L 19357655 intron dnt - chr2L_5_19355001 chr2L_19355001 RAL-26 294 chr2L 19393967 19393994 chr2L 19394081 19394098 5 112 1.0 1.5 1.2 2.3 131 chr2L 19393967 intron CG17544 - chr2L 19394032 intron CG17544 - chr2L 19394098 intron CG17544 - chr2L_5_19390001 chr2L_19390001 RAL-26 295 chr2L 19407725 19407739 chr2L 19407922 19407936 5 197 2.0 2.5 2.2 1.6 211 chr2L 19407725 intron Pax - chr2L 19407830 intron Pax - chr2L 19407936 intron Pax - chr2L_5_19405001 chr2L_19405001 RAL-26 296 chr2L 19441067 19441088 chr2L 19441144 19441165 7 77 2.0 5.0 3.5 1.6 98 chr2L 19441067 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441165 5` UTR CG10237 - chr2L_7_19440001 chr2L_19440001 RAL-26 297 chr2L 19544599 19544617 chr2L 19544666 19544668 8 68 8.5 5.0 6.8 1.0 69 chr2L 19544599 exon ref(2)P + chr2L 19544634 exon ref(2)P + chr2L 19544668 exon ref(2)P + chr2L_8_19540001 chr2L_19540001 RAL-26 298 chr2L 19597273 19597300 chr2L 19597506 19597533 10 233 3.0 3.0 3.0 2.5 260 chr2L 19597273 intron Lar + chr2L 19597403 intron Lar + chr2L 19597533 intron Lar + chr2L_10_19595001 chr2L_19595001 RAL-26 299 chr2L 19605525 19605558 chr2L 19605602 19605636 10 77 1.5 2.5 2.0 3.3 111 chr2L 19605525 intron Lar + chr2L 19605580 intron Lar + chr2L 19605636 intron Lar + chr2L_10_19605001 chr2L_19605001 RAL-26 300 chr2L 19609638 19609668 chr2L 19609732 19609762 14 92 1.0 3.5 2.2 4.4 124 chr2L 19609638 intron Lar + chr2L 19609700 intron Lar + chr2L 19609762 intron Lar + chr2L_14_19605001 chr2L_19605001 RAL-26 301 chr2L 19620094 19620132 chr2L 19621083 19621121 jockey 19 989 2.5 4.5 3.5 4.2 1027 chr2L 19620094 intron Lar + chr2L 19620608 intron Lar + chr2L 19621121 intron Lar + chr2L_19_19620001 chr2L_19620001 RAL-26 302 chr2L 19652576 19652603 chr2L 19674010 19674037 opus 7 21432 0.5 1.5 1.0 3.5 21461 chr2L 19652576 intron Lar + chr2L 19663306 intron Lar + chr2L 19674037 intron Lar + chr2L_7_19660001 chr2L_19660001 RAL-26 303 chr2L 19703535 19703556 chr2L 19712671 19712691 roo 8 9136 6.0 4.5 5.2 1.3 9156 chr2L 19703535 intron Lar + chr2L 19708113 intron Lar + chr2L 19712691 intron Lar + chr2L_8_19705001 chr2L_19705001 RAL-26 304 chr2L 19762814 19762836 chr2L 19763056 19763078 pogo 6 242 1.5 1.5 1.5 2.4 264 chr2L 19762814 5` UTR fbp - chr2L 19762946 intron fbp - chr2L 19763078 intron fbp - chr2L_6_19760001 chr2L_19760001 RAL-26 305 chr2L 19821793 19821820 chr2L 19821870 19821897 5 77 1.5 0.5 1.0 2.5 104 chr2L 19821793 intron sick + chr2L 19821845 intron sick + chr2L 19821897 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-26 306 chr2L 19878994 19879019 chr2L 19879202 19879228 7 209 0.5 2.5 1.5 2.8 234 chr2L 19878994 intron sick + chr2L 19879111 intron sick + chr2L 19879228 intron sick + chr2L_7_19875001 chr2L_19875001 RAL-26 307 chr2L 19898959 19898991 chr2L 19899099 19899114 13 139 4.5 3.0 3.8 2.7 155 chr2L 19898959 intron sick + chr2L 19899036 intron sick + chr2L 19899114 intron sick + chr2L_13_19895001 chr2L_19895001 RAL-26 308 chr2L 20005870 20005897 chr2L 20010946 20010973 flea 4 5076 1.0 1.5 1.2 1.8 5103 chr2L 20005870 intron CG43861 - chr2L 20008422 intron CG43861 - chr2L 20010973 intron CG43861 - chr2L_4_20005001 chr2L_20005001 RAL-26 309 chr2L 20296507 20296541 chr2L 20296588 20296622 5 81 1.0 3.5 2.2 1.6 115 chr2L 20296507 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296622 intergenic CR43414 - chr2L_5_20295001 chr2L_20295001 RAL-26 310 chr2L 20420116 20420135 chr2L 20420193 20420212 5 76 1.0 0.5 0.8 2.8 96 chr2L 20420116 intron Arpc2 + chr2L 20420164 intron Arpc2 + chr2L 20420212 intron Arpc2 + chr2L_5_20420001 chr2L_20420001 RAL-26 311 chr2L 20498694 20498702 chr2L 20498793 20498801 6 99 3.0 3.0 3.0 1.5 107 chr2L 20498694 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498801 intergenic not near genes chr2L_6_20495001 chr2L_20495001 RAL-26 312 chr2L 20568667 20568687 chr2L 20569056 20569077 X-element 7 390 1.5 3.0 2.2 2.2 410 chr2L 20568667 intron CR45347 + chr2L 20568872 intron CR45347 + chr2L 20569077 intron CR45347 + chr2L_7_20565001 chr2L_20565001 RAL-26 313 chr2L 20576220 20576252 chr2L 20583687 20583720 blood 11 7467 3.5 3.5 3.5 2.4 7500 chr2L 20576220 intergenic CR45347 + chr2L 20579970 intergenic not near genes chr2L 20583720 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-26 314 chr2L 20607638 20607667 chr2L 20607717 20607746 6 75 2.0 2.5 2.2 1.9 108 chr2L 20607638 intron,3` UTR CR44909 -,CR43608 - chr2L 20607692 intron,3` UTR CR44909 -,CR43608 - chr2L 20607746 intron,3` UTR CR44909 -,CR43608 - chr2L_6_20605001 chr2L_20605001 RAL-26 315 chr2L 20667250 20667259 chr2L 20667338 20667347 4 88 1.0 8.5 4.8 0.7 97 chr2L 20667250 intron,5` UTR CG31678 -,CR45004 + chr2L 20667298 intron,5` UTR CG31678 -,CR45004 + chr2L 20667347 intron,5` UTR CG31678 -,CR45004 + chr2L_4_20665001 chr2L_20665001 RAL-26 316 chr2L 20668700 20668720 chr2L 20668776 20668796 4 76 3.0 5.0 4.0 0.8 96 chr2L 20668700 intron CG31678 - chr2L 20668748 intron CG31678 - chr2L 20668796 intron CG31678 - chr2L_4_20665001 chr2L_20665001 RAL-26 317 chr2L 20687085 20687108 chr2L 20687164 20687187 8 79 4.0 2.0 3.0 2.0 102 chr2L 20687085 intron Hr38 - chr2L 20687136 intron Hr38 - chr2L 20687187 intron Hr38 - chr2L_8_20685001 chr2L_20685001 RAL-26 318 chr2L 20818512 20818529 chr2L 20818593 20818610 7 81 4.0 2.5 3.2 1.7 98 chr2L 20818512 exon CheB38a - chr2L 20818561 intergenic CheB38a - chr2L 20818610 intergenic CheB38a - chr2L_7_20815001 chr2L_20815001 RAL-26 319 chr2L 20835820 20835828 chr2L 20836537 20836545 Quasimodo 4 717 0.5 1.0 0.8 2.2 725 chr2L 20835820 5` UTR Oseg5 - chr2L 20836182 intergenic Oseg5 -,Spn38F - chr2L 20836545 intergenic Spn38F - chr2L_4_20835001 chr2L_20835001 RAL-26 320 chr2L 20957747 20957753 chr2L 20957837 20957845 4 96 4.0 2.5 3.2 1.0 98 chr2L 20957747 intergenic not near genes chr2L 20957796 intergenic not near genes chr2L 20957845 intergenic not near genes chr2L_4_20955001 chr2L_20955001 RAL-26 321 chr2L 20976641 20976678 chr2L 20981456 20981493 X-element 10 4815 1.0 2.0 1.5 4.0 4852 chr2L 20976641 intron CG42238 - chr2L 20979067 intron CG42238 - chr2L 20981493 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-26 322 chr2L 20984737 20984772 chr2L 20984829 20984864 4 92 1.5 1.5 1.5 1.6 127 chr2L 20984737 intron CG42238 - chr2L 20984800 intron CG42238 - chr2L 20984864 intron CG42238 - chr2L_4_20980001 chr2L_20980001 RAL-26 323 chr2L 21001106 21001132 chr2L 21001185 21001211 5 79 1.5 2.0 1.8 1.8 105 chr2L 21001106 intron CG42238 - chr2L 21001158 intron CG42238 - chr2L 21001211 intron CG42238 - chr2L_5_21000001 chr2L_21000001 RAL-26 324 chr2L 21020274 21020311 chr2L 21023951 21023988 NOF 14 3677 2.0 4.5 3.2 3.3 3714 chr2L 21020274 intron CG42238 - chr2L 21022131 intron CG42238 - chr2L 21023988 intron CG42238 - chr2L_14_21020001 chr2L_21020001 RAL-26 325 chr2L 21041143 21041164 chr2L 21049404 21049425 Tirant 4 8261 2.5 4.0 3.2 1.0 8282 chr2L 21041143 intron CG42238 - chr2L 21045284 intron CG42238 - chr2L 21049425 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-26 326 chr2L 21154175 21154189 chr2L 21154252 21154266 5 77 0.5 2.5 1.5 2.0 91 chr2L 21154175 intergenic E2f2 - chr2L 21154220 intergenic E2f2 - chr2L 21154266 intergenic E2f2 - chr2L_5_21150001 chr2L_21150001 RAL-26 327 chr2L 21832497 21832517 chr2L 21832754 21832774 5 257 0.0 2.0 1.0 2.5 277 chr2L 21832497 intron tsh + chr2L 21832636 intron tsh + chr2L 21832774 intron tsh + chr2L_5_21830001 chr2L_21830001 RAL-26 328 chr2L 21836395 21836427 chr2L 21836485 21836515 4 90 3.5 4.0 3.8 0.8 120 chr2L 21836395 3` UTR tsh + chr2L 21836455 3` UTR tsh + chr2L 21836515 3` UTR tsh + chr2L_4_21835001 chr2L_21835001 RAL-26 329 chr2L 21855476 21855513 chr2L 21855562 21855600 4 86 1.0 0.5 0.8 2.2 124 chr2L 21855476 intron CR44917 + chr2L 21855538 intron CR44917 + chr2L 21855600 intron CR44917 + chr2L_4_21855001 chr2L_21855001 RAL-26 330 chr2L 21859316 21859353 chr2L 21859396 21859433 12 78 2.5 1.5 2.0 4.0 117 chr2L 21859316 intron CR44917 + chr2L 21859374 intron CR44917 + chr2L 21859433 intron CR44917 + chr2L_12_21855001 chr2L_21855001 RAL-26 331 chr2L 21953793 21953820 chr2L 21954694 21954721 4 901 10.5 14.5 12.5 0.3 928 chr2L 21953793 intergenic not near genes chr2L 21954257 intergenic not near genes chr2L 21954721 intergenic not near genes chr2L_4_21950001 chr2L_21950001 RAL-26 332 chr2L 21981685 21981716 chr2L 21990850 21990881 roo 4 9165 0.0 5.0 2.5 1.1 9196 chr2L 21981685 exon CG2528 - chr2L 21986283 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_4_21985001 chr2L_21985001 RAL-26 333 chr2L 22077287 22077317 chr2L 22077368 22077398 5 81 1.5 0.0 0.8 2.8 111 chr2L 22077287 intergenic not near genes chr2L 22077342 intergenic not near genes chr2L 22077398 intergenic not near genes chr2L_5_22075001 chr2L_22075001 RAL-26 334 chr2L 22558144 22558170 chr2L 22558220 22558246 4 76 1.0 0.5 0.8 2.2 102 chr2L 22558144 intergenic not near genes chr2L 22558195 intergenic not near genes chr2L 22558246 intergenic not near genes chr2L_4_22555001 chr2L_22555001 RAL-26 335 chr2L 22719439 22719463 chr2L 22727562 22727586 gypsy2 7 8121 2.0 1.5 1.8 2.5 8147 chr2L 22719439 intron CG40006 - chr2L 22723512 intron CG40006 - chr2L 22727586 intron CG40006 - chr2L_7_22720001 chr2L_22720001 RAL-26 336 chr2L 22941246 22941278 chr2L 22941328 22941360 7 82 1.0 2.5 1.8 2.5 114 chr2L 22941246 3` UTR lt + chr2L 22941303 3` UTR lt + chr2L 22941360 3` UTR lt + chr2L_7_22940001 chr2L_22940001 RAL-26 337 chr2L 23006503 23006538 chr2L 23007179 23007214 Osvaldo 13 674 1.0 1.5 1.2 5.9 711 chr2L 23006503 intron Cht3 - chr2L 23006858 intron Cht3 - chr2L 23007214 intron Cht3 - chr2L_13_23005001 chr2L_23005001 RAL-26 338 chr2L 23241847 23241854 chr2L 23241927 23241934 6 80 4.0 1.5 2.8 1.6 87 chr2L 23241847 intergenic not near genes chr2L 23241890 intergenic not near genes chr2L 23241934 intergenic not near genes chr2L_6_23240001 chr2L_23240001 RAL-26 339 chr2R 529321 529348 chr2R 537946 537973 Max-element 4 8625 1.0 1.0 1.0 2.0 8652 chr2R 529321 intron CG40378 + chr2R 533647 intron CG40378 + chr2R 537973 intron CG40378 + chr2R_4_530001 chr2R_530001 RAL-26 340 chr2R 1082370 1082377 chr2R 1087141 1087153 Doc 5 4775 4.5 5.5 5.0 0.8 4783 chr2R 1082370 intron rl + chr2R 1084762 intron rl + chr2R 1087153 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-26 341 chr2R 4580191 4580211 chr2R 4580818 4580838 9 627 3.0 2.0 2.5 2.6 647 chr2R 4580191 intergenic not near genes chr2R 4580514 intergenic not near genes chr2R 4580838 intergenic not near genes chr2R_9_4580001 chr2R_4580001 RAL-26 342 chr2R 4604550 4604577 chr2R 4604629 4604656 7 79 3.0 1.5 2.2 2.2 106 chr2R 4604550 intron p120ctn + chr2R 4604603 intron p120ctn + chr2R 4604656 intron p120ctn + chr2R_7_4600001 chr2R_4600001 RAL-26 343 chr2R 4622963 4622987 chr2R 4624111 4624146 1360 5 1157 2.0 2.0 2.0 1.7 1183 chr2R 4622963 intergenic CR44101 - chr2R 4623554 intergenic not near genes chr2R 4624146 intergenic not near genes chr2R_5_4620001 chr2R_4620001 RAL-26 344 chr2R 4656775 4656811 chr2R 4656985 4657021 10 208 24.5 20.5 22.5 0.4 246 chr2R 4656775 intergenic not near genes chr2R 4656898 intergenic not near genes chr2R 4657021 intergenic not near genes chr2R_10_4655001 chr2R_4655001 RAL-26 345 chr2R 4750355 4750376 chr2R 4751512 4751533 1360 6 1157 1.0 1.0 1.0 3.0 1178 chr2R 4750355 intron conu + chr2R 4750944 intron conu + chr2R 4751533 intron conu + chr2R_6_4750001 chr2R_4750001 RAL-26 346 chr2R 4819850 4819868 chr2R 4819938 4819957 6 88 3.5 1.5 2.5 1.7 107 chr2R 4819850 exon CG17528 - chr2R 4819904 exon CG17528 - chr2R 4819957 intron CG17528 - chr2R_6_4815001 chr2R_4815001 RAL-26 347 chr2R 4940967 4940983 chr2R 4943416 4943428 4 2447 10.5 13.5 12.0 0.3 2461 chr2R 4940967 intron Ir41a + chr2R 4942198 intron Ir41a + chr2R 4943428 intron Ir41a + chr2R_4_4940001 chr2R_4940001 RAL-26 348 chr2R 5038533 5038537 chr2R 5039330 5039334 4 797 0.5 3.0 1.8 1.4 801 chr2R 5038533 intergenic not near genes chr2R 5038934 intergenic not near genes chr2R 5039334 intergenic not near genes chr2R_4_5035001 chr2R_5035001 RAL-26 349 chr2R 5080792 5080810 chr2R 5080883 5080901 11 91 0.5 0.5 0.5 7.3 109 chr2R 5080792 intergenic not near genes chr2R 5080846 intergenic not near genes chr2R 5080901 intergenic not near genes chr2R_11_5080001 chr2R_5080001 RAL-26 350 chr2R 5209782 5209802 chr2R 5210314 5210335 7 532 3.5 0.0 1.8 2.5 553 chr2R 5209782 intron Nipped-A - chr2R 5210058 intron Nipped-A - chr2R 5210335 intron Nipped-A - chr2R_7_5210001 chr2R_5210001 RAL-26 351 chr2R 5463249 5463276 chr2R 5468696 5468723 5 5447 19.0 1.0 10.0 0.5 5474 chr2R 5463249 intergenic not near genes chr2R 5465986 intergenic not near genes chr2R 5468723 intron CG30440 - chr2R_5_5465001 chr2R_5465001 RAL-26 352 chr2R 5472365 5472393 chr2R 5472460 5472488 9 94 4.0 3.5 3.8 1.9 123 chr2R 5472365 intron CG30440 - chr2R 5472426 intron CG30440 - chr2R 5472488 intron CG30440 - chr2R_9_5470001 chr2R_5470001 RAL-26 353 chr2R 5476353 5476382 chr2R 5476897 5476926 13 544 5.0 1.5 3.2 3.1 573 chr2R 5476353 intron CG30440 - chr2R 5476640 intron CG30440 - chr2R 5476926 intron CG30440 - chr2R_13_5475001 chr2R_5475001 RAL-26 354 chr2R 5581401 5581425 chr2R 5627610 5627634 4 46209 1.0 6.0 3.5 0.9 46233 chr2R 5581401 intergenic not near genes chr2R 5604518 intron Fis1 - chr2R 5627634 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-26 355 chr2R 5859976 5860005 chr2R 5860088 5860117 11 112 4.5 3.5 4.0 2.2 141 chr2R 5859976 3` UTR dpr12 + chr2R 5860046 3` UTR dpr12 + chr2R 5860117 3` UTR dpr12 + chr2R_11_5860001 chr2R_5860001 RAL-26 356 chr2R 5869276 5869309 chr2R 5874352 5874384 flea 7 5075 2.0 1.0 1.5 2.8 5108 chr2R 5869276 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874384 intergenic not near genes chr2R_7_5870001 chr2R_5870001 RAL-26 357 chr2R 6065748 6065775 chr2R 6065860 6065887 7 112 5.5 3.0 4.2 1.3 139 chr2R 6065748 intron CCHa2-R + chr2R 6065818 intron CCHa2-R + chr2R 6065887 exon CCHa2-R + chr2R_7_6065001 chr2R_6065001 RAL-26 358 chr2R 6096719 6096751 chr2R 6101917 6101938 BS 15 5196 3.5 5.5 4.5 2.7 5219 chr2R 6096719 intron EcR - chr2R 6099328 intron EcR - chr2R 6101938 intron EcR - chr2R_15_6095001 chr2R_6095001 RAL-26 359 chr2R 6173553 6173573 chr2R 6173631 6173651 5 78 1.5 2.0 1.8 1.8 98 chr2R 6173553 intergenic Cyp6w1 + chr2R 6173602 intergenic Cyp6w1 + chr2R 6173651 intergenic Cyp6w1 + chr2R_5_6170001 chr2R_6170001 RAL-26 360 chr2R 6494531 6494553 chr2R 6499293 6499315 F-element 5 4761 2.0 2.5 2.2 1.6 4784 chr2R 6494531 intergenic not near genes chr2R 6496923 intergenic not near genes chr2R 6499315 intergenic not near genes chr2R_5_6495001 chr2R_6495001 RAL-26 361 chr2R 6500961 6500992 chr2R 6501056 6501086 9 94 2.0 2.0 2.0 3.0 125 chr2R 6500961 intergenic not near genes chr2R 6501024 intergenic not near genes chr2R 6501086 intergenic not near genes chr2R_9_6500001 chr2R_6500001 RAL-26 362 chr2R 6530778 6530792 chr2R 6530858 6530872 5 80 1.5 1.0 1.2 2.3 94 chr2R 6530778 intron jing + chr2R 6530825 intron jing + chr2R 6530872 intron jing + chr2R_5_6530001 chr2R_6530001 RAL-26 363 chr2R 6646812 6646829 chr2R 6647085 6647102 6 272 2.5 1.0 1.8 2.1 290 chr2R 6646812 intergenic not near genes chr2R 6646957 intergenic not near genes chr2R 6647102 intergenic not near genes chr2R_6_6645001 chr2R_6645001 RAL-26 364 chr2R 6964282 6964317 chr2R 6964359 6964394 6 77 0.0 2.0 1.0 3.0 112 chr2R 6964282 intron,intron mim -,CheB42c - chr2R 6964338 intron,intron mim -,CheB42c - chr2R 6964394 intron,intron mim -,CheB42c - chr2R_6_6960001 chr2R_6960001 RAL-26 365 chr2R 7101612 7101649 chr2R 7101707 7101744 7 95 2.0 1.5 1.8 2.5 132 chr2R 7101612 intron esn + chr2R 7101678 intron esn + chr2R 7101744 intron esn + chr2R_7_7100001 chr2R_7100001 RAL-26 366 chr2R 7235822 7235845 chr2R 7240914 7240937 jockey 10 5092 2.0 5.0 3.5 2.2 5115 chr2R 7235822 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240937 intergenic not near genes chr2R_10_7235001 chr2R_7235001 RAL-26 367 chr2R 7608419 7608432 chr2R 7613622 7613635 I-element 4 5203 0.5 0.0 0.2 3.3 5216 chr2R 7608419 intron CG1358 - chr2R 7611027 intron CG1358 - chr2R 7613635 intron CG1358 - chr2R_4_7610001 chr2R_7610001 RAL-26 368 chr2R 7614486 7614522 chr2R 7614565 7614581 9 77 1.5 2.5 2.0 3.0 95 chr2R 7614486 intron CG1358 - chr2R 7614534 intron CG1358 - chr2R 7614581 intron CG1358 - chr2R_9_7610001 chr2R_7610001 RAL-26 369 chr2R 7692012 7692022 chr2R 7692093 7692103 4 80 2.5 0.5 1.5 1.6 91 chr2R 7692012 intron CG1399 - chr2R 7692058 intron CG1399 - chr2R 7692103 intron CG1399 - chr2R_4_7690001 chr2R_7690001 RAL-26 370 chr2R 7714080 7714114 chr2R 7714156 7714190 6 76 1.0 0.0 0.5 4.0 110 chr2R 7714080 exon CG1942 + chr2R 7714135 3` UTR CG1942 + chr2R 7714190 intergenic CG1942 + chr2R_6_7710001 chr2R_7710001 RAL-26 371 chr2R 7815671 7815704 chr2R 7822140 7822167 Burdock 9 6468 2.0 3.0 2.5 2.6 6496 chr2R 7815671 intergenic CG1882 + chr2R 7818919 intergenic not near genes chr2R 7822167 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 RAL-26 372 chr2R 7861470 7861493 chr2R 7861682 7861705 5 212 2.0 3.0 2.5 1.4 235 chr2R 7861470 intron Dgk - chr2R 7861588 intron Dgk - chr2R 7861705 intron Dgk - chr2R_5_7860001 chr2R_7860001 RAL-26 373 chr2R 7867977 7868002 chr2R 7868100 7868122 7 121 2.5 5.5 4.0 1.4 145 chr2R 7867977 intron Dgk - chr2R 7868050 intron Dgk - chr2R 7868122 intron Dgk - chr2R_7_7865001 chr2R_7865001 RAL-26 374 chr2R 7869190 7869211 chr2R 7873976 7873997 Doc 9 4786 4.0 4.0 4.0 1.8 4807 chr2R 7869190 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7873997 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-26 375 chr2R 8015662 8015683 chr2R 8017674 8017706 12 2019 2.0 5.0 3.5 2.7 2044 chr2R 8015662 intergenic mir-4981 + chr2R 8016684 intergenic not near genes chr2R 8017706 intergenic not near genes chr2R_12_8015001 chr2R_8015001 RAL-26 376 chr2R 8036022 8036054 chr2R 8036100 8036132 8 76 2.5 2.0 2.2 2.5 110 chr2R 8036022 intron Optix + chr2R 8036077 intron Optix + chr2R 8036132 intron Optix + chr2R_8_8035001 chr2R_8035001 RAL-26 377 chr2R 8157900 8157910 chr2R 8157988 8157998 6 88 4.5 3.0 3.8 1.2 98 chr2R 8157900 5` UTR CR44068 + chr2R 8157949 5` UTR CR44068 + chr2R 8157998 5` UTR CR44068 + chr2R_6_8155001 chr2R_8155001 RAL-26 378 chr2R 8160934 8160950 chr2R 8161024 8161040 1360 9 90 5.5 10.0 7.8 1.0 106 chr2R 8160934 intron CG8708 - chr2R 8160987 intron CG8708 - chr2R 8161040 intron CG8708 - chr2R_9_8160001 chr2R_8160001 RAL-26 379 chr2R 8185646 8185667 chr2R 8185736 8185757 6 90 1.5 4.5 3.0 1.5 111 chr2R 8185646 intron LRP1 + chr2R 8185702 intron LRP1 + chr2R 8185757 intron LRP1 + chr2R_6_8185001 chr2R_8185001 RAL-26 380 chr2R 8201193 8201207 chr2R 8201273 8201289 5 81 0.0 3.5 1.8 1.8 96 chr2R 8201193 intron LRP1 + chr2R 8201241 intron LRP1 + chr2R 8201289 intron LRP1 + chr2R_5_8200001 chr2R_8200001 RAL-26 381 chr2R 8209605 8209617 chr2R 8209682 8209693 5 77 5.5 4.0 4.8 0.9 88 chr2R 8209605 exon LRP1 + chr2R 8209649 intron LRP1 + chr2R 8209693 intron LRP1 + chr2R_5_8205001 chr2R_8205001 RAL-26 382 chr2R 8398211 8398242 chr2R 8402992 8403023 Doc 10 4781 2.5 4.5 3.5 2.2 4812 chr2R 8398211 intron CG2121 - chr2R 8400617 intron CG2121 - chr2R 8403023 intron CG2121 - chr2R_10_8400001 chr2R_8400001 RAL-26 383 chr2R 8508766 8508792 chr2R 8508849 8508873 6 82 1.5 4.0 2.8 1.6 107 chr2R 8508766 intron mtt - chr2R 8508820 intron mtt - chr2R 8508873 intron mtt - chr2R_6_8505001 chr2R_8505001 RAL-26 384 chr2R 8566033 8566059 chr2R 8566985 8567011 1360 5 952 3.0 1.0 2.0 1.7 978 chr2R 8566033 5` UTR Cyp6a14 - chr2R 8566522 5` UTR Cyp6a14 - chr2R 8567011 5` UTR Cyp6a14 - chr2R_5_8565001 chr2R_8565001 RAL-26 385 chr2R 8615784 8615809 chr2R 8615897 8615922 4 113 1.0 2.5 1.8 1.4 138 chr2R 8615784 intron Cirl + chr2R 8615853 intron Cirl + chr2R 8615922 5` UTR Cirl + chr2R_4_8615001 chr2R_8615001 RAL-26 386 chr2R 8689952 8689974 chr2R 8690039 8690061 4 87 0.5 2.0 1.2 1.8 109 chr2R 8689952 intergenic not near genes chr2R 8690006 intergenic not near genes chr2R 8690061 intergenic not near genes chr2R_4_8690001 chr2R_8690001 RAL-26 387 chr2R 8722763 8722793 chr2R 8723004 8723034 pogo 10 241 3.5 7.5 5.5 1.5 271 chr2R 8722763 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723034 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RAL-26 388 chr2R 8847189 8847202 chr2R 8847290 8847304 4 102 4.0 7.0 5.5 0.6 115 chr2R 8847189 intron sns + chr2R 8847246 intron sns + chr2R 8847304 intron sns + chr2R_4_8845001 chr2R_8845001 RAL-26 389 chr2R 9055797 9055821 chr2R 9055869 9055901 4 76 4.0 0.5 2.2 1.2 104 chr2R 9055797 intron CG13743 - chr2R 9055849 intron CG13743 - chr2R 9055901 intron CG13743 - chr2R_4_9055001 chr2R_9055001 RAL-26 390 chr2R 9206104 9206130 chr2R 9206187 9206213 5 83 6.5 2.5 4.5 0.9 109 chr2R 9206104 exon CG8027 - chr2R 9206158 exon CG8027 - chr2R 9206213 exon CG8027 - chr2R_5_9205001 chr2R_9205001 RAL-26 391 chr2R 9212691 9212721 chr2R 9213177 9213207 roo 11 486 4.0 4.0 4.0 2.2 516 chr2R 9212691 intergenic CR45309 + chr2R 9212949 intergenic CR45309 + chr2R 9213207 5` UTR CR45309 + chr2R_11_9210001 chr2R_9210001 RAL-26 392 chr2R 9378127 9378141 chr2R 9378209 9378223 11 81 3.0 9.5 6.2 1.5 96 chr2R 9378127 intron CG13954 - chr2R 9378175 intron CG13954 - chr2R 9378223 intron CG13954 - chr2R_11_9375001 chr2R_9375001 RAL-26 393 chr2R 9391054 9391086 chr2R 9391615 9391647 7 560 1.5 2.0 1.8 2.5 593 chr2R 9391054 intron l(2)03659 + chr2R 9391350 exon l(2)03659 + chr2R 9391647 exon l(2)03659 + chr2R_7_9390001 chr2R_9390001 RAL-26 394 chr2R 9510665 9510698 chr2R 9510781 9510814 13 116 2.5 4.0 3.2 3.1 149 chr2R 9510665 intron brp + chr2R 9510740 intron brp + chr2R 9510814 intron brp + chr2R_13_9510001 chr2R_9510001 RAL-26 395 chr2R 9617782 9617805 chr2R 9618040 9618063 6 258 2.0 0.0 1.0 3.0 281 chr2R 9617782 intron Mmp2 - chr2R 9617922 intron Mmp2 - chr2R 9618063 intron Mmp2 - chr2R_6_9615001 chr2R_9615001 RAL-26 396 chr2R 9699426 9699436 chr2R 9699513 9699523 4 87 3.0 4.0 3.5 0.9 97 chr2R 9699426 intergenic not near genes chr2R 9699474 intergenic not near genes chr2R 9699523 intergenic not near genes chr2R_4_9695001 chr2R_9695001 RAL-26 397 chr2R 9871038 9871074 chr2R 9871524 9871560 roo 15 485 1.5 1.5 1.5 6.0 522 chr2R 9871038 intron cbx - chr2R 9871299 intron cbx - chr2R 9871560 intron,5` UTR cbx -,CG18446 + chr2R_15_9870001 chr2R_9870001 RAL-26 398 chr2R 9925920 9925943 chr2R 9926034 9926057 4 114 2.0 1.0 1.5 1.6 137 chr2R 9925920 intron Mef2 - chr2R 9925988 intron Mef2 - chr2R 9926057 intron Mef2 - chr2R_4_9925001 chr2R_9925001 RAL-26 399 chr2R 10005850 10005879 chr2R 10007015 10007034 1360 8 1164 1.5 4.5 3.0 2.0 1184 chr2R 10005850 intron Pka-R2 - chr2R 10006442 intron Pka-R2 - chr2R 10007034 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-26 400 chr2R 10040912 10040938 chr2R 10040994 10041020 4 82 0.5 1.0 0.8 2.2 108 chr2R 10040912 intron oys - chr2R 10040966 intron oys - chr2R 10041020 intron oys - chr2R_4_10040001 chr2R_10040001 RAL-26 401 chr2R 10132211 10132222 chr2R 10132291 10132302 5 80 0.0 7.0 3.5 1.1 91 chr2R 10132211 intron gem + chr2R 10132256 intron gem + chr2R 10132302 intron gem + chr2R_5_10130001 chr2R_10130001 RAL-26 402 chr2R 10144298 10144326 chr2R 10147072 10147100 8 2776 31.0 19.5 25.2 0.3 2802 chr2R 10144298 intron CG18011 + chr2R 10145699 exon CG18011 + chr2R 10147100 exon KCNQ - chr2R_8_10145001 chr2R_10145001 RAL-26 403 chr2R 10176125 10176154 chr2R 10176204 10176233 8 79 2.0 5.5 3.8 1.7 108 chr2R 10176125 intron KCNQ - chr2R 10176179 intron KCNQ - chr2R 10176233 intron KCNQ - chr2R_8_10175001 chr2R_10175001 RAL-26 404 chr2R 10266506 10266528 chr2R 10266597 10266609 4 88 3.0 6.0 4.5 0.7 103 chr2R 10266506 intron CG12910 + chr2R 10266558 intron CG12910 + chr2R 10266609 intron CG12910 + chr2R_4_10265001 chr2R_10265001 RAL-26 405 chr2R 10313324 10313353 chr2R 10313412 10313415 4 81 2.5 1.5 2.0 1.3 91 chr2R 10313324 intergenic not near genes chr2R 10313370 intergenic not near genes chr2R 10313415 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-26 406 chr2R 10352673 10352703 chr2R 10352749 10352780 8 76 0.5 1.5 1.0 4.0 107 chr2R 10352673 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352726 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352780 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_8_10350001 chr2R_10350001 RAL-26 407 chr2R 10387981 10387998 chr2R 10388078 10388095 4 97 0.0 3.5 1.8 1.4 114 chr2R 10387981 intron CG42732 - chr2R 10388038 intron CG42732 - chr2R 10388095 intron CG42732 - chr2R_4_10385001 chr2R_10385001 RAL-26 408 chr2R 10390910 10390944 chr2R 10390991 10391025 8 80 1.0 1.0 1.0 4.0 115 chr2R 10390910 intron CG42732 - chr2R 10390968 intron CG42732 - chr2R 10391025 intron CG42732 - chr2R_8_10390001 chr2R_10390001 RAL-26 409 chr2R 10429022 10429050 chr2R 10429098 10429127 6 77 1.5 0.0 0.8 3.3 105 chr2R 10429022 intergenic not near genes chr2R 10429074 intergenic not near genes chr2R 10429127 intergenic not near genes chr2R_6_10425001 chr2R_10425001 RAL-26 410 chr2R 10469020 10469056 chr2R 10469146 10469182 15 126 4.0 2.5 3.2 3.6 162 chr2R 10469020 intron CG11777 + chr2R 10469101 intron CG11777 + chr2R 10469182 intron CG11777 + chr2R_15_10465001 chr2R_10465001 RAL-26 411 chr2R 10572016 10572044 chr2R 10572208 10572236 4 192 2.5 2.0 2.2 1.2 220 chr2R 10572016 intron psq + chr2R 10572126 intron psq + chr2R 10572236 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-26 412 chr2R 10607477 10607498 chr2R 10607685 10607706 5 208 1.5 4.5 3.0 1.2 229 chr2R 10607477 intron psq + chr2R 10607592 intron psq + chr2R 10607706 intron psq + chr2R_5_10605001 chr2R_10605001 RAL-26 413 chr2R 10622352 10622381 chr2R 10637117 10637128 mdg1 4 14760 1.5 0.5 1.0 2.0 14776 chr2R 10622352 intron CG11883 + chr2R 10629740 intron CG11883 + chr2R 10637128 intron CG11883 + chr2R_4_10625001 chr2R_10625001 RAL-26 414 chr2R 10658057 10658085 chr2R 10658149 10658177 9 92 1.5 4.0 2.8 2.4 120 chr2R 10658057 intergenic not near genes chr2R 10658117 intergenic not near genes chr2R 10658177 intergenic not near genes chr2R_9_10655001 chr2R_10655001 RAL-26 415 chr2R 10671252 10671288 chr2R 10671330 10671353 10 76 3.5 0.0 1.8 3.6 101 chr2R 10671252 intergenic not near genes chr2R 10671302 intergenic not near genes chr2R 10671353 intergenic not near genes chr2R_10_10670001 chr2R_10670001 RAL-26 416 chr2R 10757544 10757560 chr2R 10757647 10757663 6 103 2.0 4.5 3.2 1.4 119 chr2R 10757544 5` UTR CG33144 - chr2R 10757604 intron CG33144 - chr2R 10757663 intron CG33144 - chr2R_6_10755001 chr2R_10755001 RAL-26 417 chr2R 10790141 10790171 chr2R 10790229 10790259 10 88 2.0 0.5 1.2 4.5 118 chr2R 10790141 intron CG33144 - chr2R 10790200 intron CG33144 - chr2R 10790259 intron CG33144 - chr2R_10_10790001 chr2R_10790001 RAL-26 418 chr2R 10805778 10805793 chr2R 10805876 10805891 4 98 3.0 2.0 2.5 1.1 113 chr2R 10805778 intron wde - chr2R 10805834 intron wde - chr2R 10805891 intron wde - chr2R_4_10805001 chr2R_10805001 RAL-26 419 chr2R 10948024 10948062 chr2R 10955575 10955613 17.6 14 7551 0.0 2.0 1.0 7.0 7589 chr2R 10948024 intergenic not near genes chr2R 10951818 intergenic not near genes chr2R 10955613 intergenic not near genes chr2R_14_10950001 chr2R_10950001 RAL-26 420 chr2R 10999378 10999414 chr2R 10999513 10999549 18 133 3.5 2.5 3.0 4.5 171 chr2R 10999378 intron luna - chr2R 10999464 intron luna - chr2R 10999549 intron luna - chr2R_18_10995001 chr2R_10995001 RAL-26 421 chr2R 11019885 11019908 chr2R 11024946 11024974 jockey 7 5065 2.0 4.0 3.0 1.8 5089 chr2R 11019885 intron luna - chr2R 11022430 intron luna - chr2R 11024974 intron luna - chr2R_7_11020001 chr2R_11020001 RAL-26 422 chr2R 11097357 11097384 chr2R 11097462 11097489 4 104 3.0 2.5 2.8 1.1 132 chr2R 11097357 intron luna - chr2R 11097423 intron luna - chr2R 11097489 intron luna - chr2R_4_11095001 chr2R_11095001 RAL-26 423 chr2R 11102867 11102891 chr2R 11102949 11102973 4 82 2.5 0.0 1.2 1.8 106 chr2R 11102867 intron luna - chr2R 11102920 intron luna - chr2R 11102973 intron luna - chr2R_4_11100001 chr2R_11100001 RAL-26 424 chr2R 11115278 11115288 chr2R 11115355 11115365 4 77 5.5 9.0 7.2 0.5 87 chr2R 11115278 intron luna - chr2R 11115322 intron luna - chr2R 11115365 intron luna - chr2R_4_11115001 chr2R_11115001 RAL-26 425 chr2R 11145262 11145294 chr2R 11145349 11145381 11 87 0.0 3.5 1.8 3.9 119 chr2R 11145262 intron CG13229 - chr2R 11145322 intron CG13229 - chr2R 11145381 intron CG13229 - chr2R_11_11145001 chr2R_11145001 RAL-26 426 chr2R 11172797 11172827 chr2R 11172875 11172905 9 78 2.5 1.0 1.8 3.2 108 chr2R 11172797 intron shn + chr2R 11172851 intron shn + chr2R 11172905 intron shn + chr2R_9_11170001 chr2R_11170001 RAL-26 427 chr2R 11207813 11207842 chr2R 11208006 11208012 BS 7 189 4.5 1.5 3.0 1.8 199 chr2R 11207813 intron shn + chr2R 11207912 intron shn + chr2R 11208012 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-26 428 chr2R 11415534 11415551 chr2R 11418682 11418700 opus 6 3149 0.5 4.0 2.2 1.9 3166 chr2R 11415534 intron Drip - chr2R 11417117 intron Drip - chr2R 11418700 intron Drip - chr2R_6_11415001 chr2R_11415001 RAL-26 429 chr2R 11450514 11450522 chr2R 11450569 11450600 4 72 2.0 3.0 2.5 1.1 86 chr2R 11450514 3` UTR qvr + chr2R 11450557 3` UTR qvr + chr2R 11450600 3` UTR qvr + chr2R_4_11450001 chr2R_11450001 RAL-26 430 chr2R 11561969 11561975 chr2R 11562042 11562053 5 77 3.5 7.5 5.5 0.8 84 chr2R 11561969 intergenic not near genes chr2R 11562011 intergenic not near genes chr2R 11562053 intergenic not near genes chr2R_5_11560001 chr2R_11560001 RAL-26 431 chr2R 11605294 11605307 chr2R 11605460 11605475 6 168 3.5 3.0 3.2 1.4 181 chr2R 11605294 intron tou - chr2R 11605384 intron tou - chr2R 11605475 intron tou - chr2R_6_11605001 chr2R_11605001 RAL-26 432 chr2R 11636417 11636442 chr2R 11636494 11636495 6 73 1.0 2.0 1.5 2.4 78 chr2R 11636417 intron CG9005 - chr2R 11636456 intron CG9005 - chr2R 11636495 intron CG9005 - chr2R_6_11635001 chr2R_11635001 RAL-26 433 chr2R 11638685 11638708 chr2R 11638934 11638957 4 249 1.5 0.5 1.0 2.0 272 chr2R 11638685 intron CG9005 - chr2R 11638821 intron CG9005 - chr2R 11638957 intron CG9005 - chr2R_4_11635001 chr2R_11635001 RAL-26 434 chr2R 11639430 11639457 chr2R 11639518 11639545 9 88 3.0 3.0 3.0 2.2 115 chr2R 11639430 intron CG9005 - chr2R 11639488 intron CG9005 - chr2R 11639545 intron CG9005 - chr2R_9_11635001 chr2R_11635001 RAL-26 435 chr2R 12044357 12044646 chr2R 12044442 12044724 13 77 2.0 1.5 1.8 4.6 367 chr2R 12044357 intergenic Drep-1 + chr2R 12044540 intergenic Drep-1 + chr2R 12044724 5` UTR Drep-1 + chr2R_13_12040001 chr2R_12040001 RAL-26 436 chr2R 8518777 8518789 chr2R 12066171 12066199 8 3547397 6.5 8.5 7.5 0.9 3547422 chr2R 8518777 intron mtt - chr2R 10292488 intron CAP + chr2R 12066199 intron CG8888 - chr2R_8_10290001 chr2R_10290001 RAL-26 437 chr2R 12096837 12096855 chr2R 12097289 12097307 7 452 4.0 4.5 4.2 1.3 470 chr2R 12096837 intron jeb - chr2R 12097072 intron jeb - chr2R 12097307 intron jeb - chr2R_7_12095001 chr2R_12095001 RAL-26 438 chr2R 12187472 12187508 chr2R 12190088 12190124 39 2618 103.5 76.5 90.0 0.4 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_39_12185001 chr2R_12185001 RAL-26 439 chr2R 12217575 12217597 chr2R 12217656 12217677 5 81 2.0 0.0 1.0 2.5 102 chr2R 12217575 intergenic not near genes chr2R 12217626 intergenic not near genes chr2R 12217677 intergenic not near genes chr2R_5_12215001 chr2R_12215001 RAL-26 440 chr2R 12236236 12236242 chr2R 12236327 12236333 4 91 4.5 2.5 3.5 0.9 97 chr2R 12236236 intergenic not near genes chr2R 12236284 intergenic not near genes chr2R 12236333 intergenic not near genes chr2R_4_12235001 chr2R_12235001 RAL-26 441 chr2R 12363385 12363415 chr2R 12363816 12363844 7 431 1.0 4.5 2.8 1.8 459 chr2R 12363385 intergenic CG30043 + chr2R 12363614 intergenic CG30043 + chr2R 12363844 intergenic not near genes chr2R_7_12360001 chr2R_12360001 RAL-26 442 chr2R 12377500 12377523 chr2R 12377622 12377645 5 122 1.5 0.0 0.8 2.8 145 chr2R 12377500 intergenic Cpr49Aa + chr2R 12377572 intergenic Cpr49Aa + chr2R 12377645 intergenic Cpr49Aa + chr2R_5_12375001 chr2R_12375001 RAL-26 443 chr2R 12481150 12481169 chr2R 12482941 12482973 roo 5 1794 2.5 2.5 2.5 1.4 1823 chr2R 12481150 exon Dh44-R2 + chr2R 12482062 intron Dh44-R2 + chr2R 12482973 intron Dh44-R2 + chr2R_5_12480001 chr2R_12480001 RAL-26 444 chr2R 12501699 12501726 chr2R 12503860 12503884 Rt1c 9 2160 4.0 5.5 4.8 1.6 2185 chr2R 12501699 intron fdl - chr2R 12502792 intron fdl - chr2R 12503884 intron fdl - chr2R_9_12500001 chr2R_12500001 RAL-26 445 chr2R 12527283 12527305 chr2R 12527483 12527514 8 208 2.5 1.5 2.0 2.7 231 chr2R 12527283 intergenic not near genes chr2R 12527398 intergenic not near genes chr2R 12527514 intergenic not near genes chr2R_8_12525001 chr2R_12525001 RAL-26 446 chr2R 12529272 12529295 chr2R 12529539 12529574 9 278 3.0 4.5 3.8 1.9 302 chr2R 12529272 5` UTR fra + chr2R 12529423 5` UTR fra + chr2R 12529574 5` UTR fra + chr2R_9_12525001 chr2R_12525001 RAL-26 447 chr2R 12540478 12540495 chr2R 12540561 12540578 4 83 5.5 2.0 3.8 0.8 100 chr2R 12540478 intron fra + chr2R 12540528 intron fra + chr2R 12540578 intron fra + chr2R_4_12540001 chr2R_12540001 RAL-26 448 chr2R 12695242 12695267 chr2R 12695328 12695353 5 86 2.5 0.0 1.2 2.3 111 chr2R 12695242 intergenic not near genes chr2R 12695298 intergenic not near genes chr2R 12695353 intergenic not near genes chr2R_5_12695001 chr2R_12695001 RAL-26 449 chr2R 12789299 12789327 chr2R 12797658 12797690 roo 11 8361 0.5 2.0 1.2 5.0 8391 chr2R 12789299 intron,3` UTR sca +,CR45137 - chr2R 12793494 intron,intron sca +,CR45137 - chr2R 12797690 intron,3` UTR sca +,CR45137 - chr2R_11_12790001 chr2R_12790001 RAL-26 450 chr2R 12819451 12819478 chr2R 12824520 12824547 jockey 5 5069 2.5 3.5 3.0 1.2 5096 chr2R 12819451 intergenic not near genes chr2R 12821999 intergenic not near genes chr2R 12824547 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-26 451 chr2R 12836394 12836408 chr2R 12836481 12836495 4 87 0.5 1.0 0.8 2.2 101 chr2R 12836394 intergenic not near genes chr2R 12836444 intergenic not near genes chr2R 12836495 intergenic not near genes chr2R_4_12835001 chr2R_12835001 RAL-26 452 chr2R 13136846 13136870 chr2R 13141637 13141668 Doc 6 4797 3.5 5.0 4.2 1.2 4822 chr2R 13136846 exon Cap-G + chr2R 13139257 intron Cap-G + chr2R 13141668 intron Cap-G + chr2R_6_13135001 chr2R_13135001 RAL-26 453 chr2R 13167433 13167458 chr2R 13167527 13167552 8 94 3.0 0.0 1.5 3.2 119 chr2R 13167433 intron GLaz - chr2R 13167492 intron GLaz - chr2R 13167552 intron GLaz - chr2R_8_13165001 chr2R_13165001 RAL-26 454 chr2R 13220540 13220563 chr2R 13220618 13220642 5 79 0.0 4.0 2.0 1.7 102 chr2R 13220540 intron CG17059 + chr2R 13220591 intron CG17059 + chr2R 13220642 intron CG17059 + chr2R_5_13220001 chr2R_13220001 RAL-26 455 chr2R 13305499 13305509 chr2R 13305581 13305591 4 82 6.5 5.5 6.0 0.6 92 chr2R 13305499 intergenic not near genes chr2R 13305545 intergenic not near genes chr2R 13305591 intergenic not near genes chr2R_4_13305001 chr2R_13305001 RAL-26 456 chr2R 13309664 13309680 chr2R 13309782 13309798 7 118 2.0 0.0 1.0 3.5 134 chr2R 13309664 intergenic not near genes chr2R 13309731 intergenic not near genes chr2R 13309798 intergenic not near genes chr2R_7_13305001 chr2R_13305001 RAL-26 457 chr2R 13404889 13404901 chr2R 13404974 13404985 5 84 8.5 4.0 6.2 0.7 96 chr2R 13404889 intergenic not near genes chr2R 13404937 intergenic not near genes chr2R 13404985 intergenic not near genes chr2R_5_13400001 chr2R_13400001 RAL-26 458 chr2R 13404902 13404913 chr2R 13404972 13404997 8 82 6.5 4.0 5.2 1.3 95 chr2R 13404902 intergenic not near genes chr2R 13404950 intergenic not near genes chr2R 13404997 intergenic not near genes chr2R_8_13400001 chr2R_13400001 RAL-26 459 chr2R 13432943 13432963 chr2R 13433019 13433036 7 76 2.0 3.0 2.5 2.0 93 chr2R 13432943 intron CG42321 - chr2R 13432990 intron CG42321 - chr2R 13433036 intron,5` UTR CG42321 -,CG30065 + chr2R_7_13430001 chr2R_13430001 RAL-26 460 chr2R 13562870 13562897 chr2R 13563205 13563232 4 335 2.0 3.5 2.8 1.1 362 chr2R 13562870 intergenic not near genes chr2R 13563051 intergenic not near genes chr2R 13563232 intergenic not near genes chr2R_4_13560001 chr2R_13560001 RAL-26 461 chr2R 13587696 13587721 chr2R 13587784 13587809 6 88 3.0 2.0 2.5 1.7 113 chr2R 13587696 intron,intron CG6191 -,CG45088 - chr2R 13587752 intron,intron CG6191 -,CG45088 - chr2R 13587809 intron,intron CG6191 -,CG45088 - chr2R_6_13585001 chr2R_13585001 RAL-26 462 chr2R 13632313 13632320 chr2R 13632401 13632407 4 88 6.5 3.0 4.8 0.7 94 chr2R 13632313 intron fas + chr2R 13632360 intron fas + chr2R 13632407 intron fas + chr2R_4_13630001 chr2R_13630001 RAL-26 463 chr2R 13854009 13854041 chr2R 13855608 13855641 9 1600 25.0 25.5 25.2 0.3 1632 chr2R 13854009 intron CG6543 - chr2R 13854825 exon,5` UTR CG6553 -,CR44367 + chr2R 13855641 exon,5` UTR CG6553 -,CR44367 + chr2R_9_13850001 chr2R_13850001 RAL-26 464 chr2R 13905614 13905634 chr2R 13907596 13907616 Rt1a 9 1980 1.0 5.0 3.0 2.2 2002 chr2R 13905614 intron shot - chr2R 13906615 intron shot - chr2R 13907616 intron shot - chr2R_9_13905001 chr2R_13905001 RAL-26 465 chr2R 13922633 13922657 chr2R 13922706 13922733 6 74 1.5 2.5 2.0 2.0 100 chr2R 13922633 intron shot - chr2R 13922683 intron shot - chr2R 13922733 intron shot - chr2R_6_13920001 chr2R_13920001 RAL-26 466 chr2R 14081349 14081379 chr2R 14081445 14081476 5 97 3.0 3.5 3.2 1.2 127 chr2R 14081349 intron Prosap - chr2R 14081412 intron Prosap - chr2R 14081476 intron Prosap - chr2R_5_14080001 chr2R_14080001 RAL-26 467 chr2R 14142333 14142456 chr2R 14142421 14142546 5 89 0.0 0.0 0.0 5.0 213 chr2R 14142333 intergenic not near genes chr2R 14142440 intergenic not near genes chr2R 14142546 intergenic not near genes chr2R_5_14140001 chr2R_14140001 RAL-26 468 chr2R 14277577 14277611 chr2R 14277659 14277693 9 81 0.5 2.0 1.2 4.1 116 chr2R 14277577 5` UTR Ih + chr2R 14277635 5` UTR Ih + chr2R 14277693 5` UTR Ih + chr2R_9_14275001 chr2R_14275001 RAL-26 469 chr2R 14325601 14325624 chr2R 14325716 14325719 6 110 3.0 4.5 3.8 1.2 118 chr2R 14325601 intron Shroom + chr2R 14325660 intron Shroom + chr2R 14325719 intron Shroom + chr2R_6_14325001 chr2R_14325001 RAL-26 470 chr2R 14393865 14393899 chr2R 14393950 14393984 13 85 6.5 1.5 4.0 2.6 119 chr2R 14393865 intergenic not near genes chr2R 14393924 intergenic not near genes chr2R 14393984 intergenic not near genes chr2R_13_14390001 chr2R_14390001 RAL-26 471 chr2R 14400366 14400381 chr2R 14400449 14400479 4 94 3.0 0.5 1.8 1.4 113 chr2R 14400366 intergenic not near genes chr2R 14400422 intergenic not near genes chr2R 14400479 intergenic not near genes chr2R_4_14400001 chr2R_14400001 RAL-26 472 chr2R 14467291 14467318 chr2R 14476443 14476470 roo 10 9152 0.5 5.5 3.0 2.5 9179 chr2R 14467291 intergenic not near genes chr2R 14471880 intergenic not near genes chr2R 14476470 5` UTR CR44462 + chr2R_10_14470001 chr2R_14470001 RAL-26 473 chr2R 14565579 14565589 chr2R 14565656 14565666 4 77 2.5 5.0 3.8 0.8 87 chr2R 14565579 intron ttv + chr2R 14565622 intron ttv + chr2R 14565666 intron ttv + chr2R_4_14565001 chr2R_14565001 RAL-26 474 chr2R 14634279 14634314 chr2R 14634367 14634402 9 88 1.0 2.0 1.5 3.6 123 chr2R 14634279 intergenic not near genes chr2R 14634340 intergenic not near genes chr2R 14634402 intergenic not near genes chr2R_9_14630001 chr2R_14630001 RAL-26 475 chr2R 14850062 14850087 chr2R 14850163 14850193 6 103 17.0 17.0 17.0 0.3 131 chr2R 14850062 exon SMC2 - chr2R 14850128 intron SMC2 - chr2R 14850193 exon SMC2 - chr2R_6_14850001 chr2R_14850001 RAL-26 476 chr2R 14878090 14878119 chr2R 14882676 14882706 9 4586 38.0 25.5 31.8 0.3 4616 chr2R 14878090 exon Cyp6a19 + chr2R 14880398 exon Cyp6a9 - chr2R 14882706 exon Cyp6a20 + chr2R_9_14880001 chr2R_14880001 RAL-26 477 chr2R 14889211 14889236 chr2R 14897817 14897844 Max-element 4 8605 2.5 0.0 1.2 1.8 8633 chr2R 14889211 intergenic Cyp6a8 - chr2R 14893528 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_4_14890001 chr2R_14890001 RAL-26 478 chr2R 14917243 14917261 chr2R 14917333 14917351 6 90 3.5 3.5 3.5 1.3 108 chr2R 14917243 intron CG10249 - chr2R 14917297 intron CG10249 - chr2R 14917351 intron CG10249 - chr2R_6_14915001 chr2R_14915001 RAL-26 479 chr2R 14979765 14979791 chr2R 14979841 14979867 4 75 1.5 2.5 2.0 1.3 102 chr2R 14979765 3` UTR ckn + chr2R 14979816 3` UTR ckn + chr2R 14979867 3` UTR ckn + chr2R_4_14975001 chr2R_14975001 RAL-26 480 chr2R 15015456 15015484 chr2R 15022880 15022908 mdg1 9 7424 3.5 1.5 2.5 2.6 7452 chr2R 15015456 intron hbs + chr2R 15019182 intron hbs + chr2R 15022908 intron hbs + chr2R_9_15015001 chr2R_15015001 RAL-26 481 chr2R 15084981 15085006 chr2R 15092030 15092039 297 6 7046 3.0 4.0 3.5 1.3 7058 chr2R 15084981 intergenic not near genes chr2R 15088510 intergenic not near genes chr2R 15092039 5` UTR CR44457 + chr2R_6_15085001 chr2R_15085001 RAL-26 482 chr2R 15119316 15119341 chr2R 15127797 15127822 Tirant 6 8480 5.0 4.5 4.8 1.0 8506 chr2R 15119316 intron chn + chr2R 15123569 intron chn + chr2R 15127822 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-26 483 chr2R 15133500 15133513 chr2R 15133579 15133592 6 79 3.5 6.0 4.8 1.0 92 chr2R 15133500 intron chn + chr2R 15133546 intron chn + chr2R 15133592 intron chn + chr2R_6_15130001 chr2R_15130001 RAL-26 484 chr2R 15137974 15138004 chr2R 15138054 15138086 8 81 2.0 0.0 1.0 4.0 112 chr2R 15137974 intron chn + chr2R 15138030 intron chn + chr2R 15138086 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-26 485 chr2R 15196092 15196123 chr2R 15196188 15196219 12 95 3.5 1.5 2.5 3.4 127 chr2R 15196092 intergenic not near genes chr2R 15196156 intergenic not near genes chr2R 15196219 intergenic not near genes chr2R_12_15195001 chr2R_15195001 RAL-26 486 chr2R 15333929 15333951 chr2R 15334092 15334097 4 158 3.5 1.5 2.5 1.1 168 chr2R 15333929 exon Hr51 + chr2R 15334013 intron Hr51 + chr2R 15334097 intron Hr51 + chr2R_4_15330001 chr2R_15330001 RAL-26 487 chr2R 15404985 15405018 chr2R 15405061 15405095 8 75 2.0 0.5 1.2 3.6 110 chr2R 15404985 intron,5` UTR CG43729 +,CR45020 + chr2R 15405040 intron,5` UTR CG43729 +,CR45020 + chr2R 15405095 intron,5` UTR CG43729 +,CR45020 + chr2R_8_15405001 chr2R_15405001 RAL-26 488 chr2R 15703746 15703778 chr2R 15703826 15703851 13 79 2.0 3.0 2.5 3.7 105 chr2R 15703746 intergenic not near genes chr2R 15703798 intergenic not near genes chr2R 15703851 intergenic not near genes chr2R_13_15700001 chr2R_15700001 RAL-26 489 chr2R 15833526 15833539 chr2R 15833612 15833626 4 87 5.0 3.0 4.0 0.8 100 chr2R 15833526 intron,intron tun +,Poxn - chr2R 15833576 intron,intron tun +,Poxn - chr2R 15833626 intron,intron tun +,Poxn - chr2R_4_15830001 chr2R_15830001 RAL-26 490 chr2R 16245634 16245657 chr2R 16245722 16245745 4 88 0.5 1.0 0.8 2.2 111 chr2R 16245634 intron CngA - chr2R 16245690 intron CngA - chr2R 16245745 intron CngA - chr2R_4_16245001 chr2R_16245001 RAL-26 491 chr2R 16380120 16380148 chr2R 16380218 16380246 5 98 3.5 0.5 2.0 1.7 126 chr2R 16380120 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380183 3` UTR CR45317 - chr2R 16380246 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_5_16380001 chr2R_16380001 RAL-26 492 chr2R 16387508 16387543 chr2R 16387989 16388024 6 481 2.5 2.0 2.2 1.9 516 chr2R 16387508 intron Sema-2b + chr2R 16387766 intron Sema-2b + chr2R 16388024 intron Sema-2b + chr2R_6_16385001 chr2R_16385001 RAL-26 493 chr2R 16676556 16676586 chr2R 16676702 16676732 9 146 2.5 4.0 3.2 2.1 176 chr2R 16676556 intron CG30463 - chr2R 16676644 intron CG30463 - chr2R 16676732 intron CG30463 - chr2R_9_16675001 chr2R_16675001 RAL-26 494 chr2R 16732864 16732880 chr2R 16733034 16733050 7 170 2.0 1.5 1.8 2.5 186 chr2R 16732864 5` UTR CG30463 - chr2R 16732957 intergenic CG30463 - chr2R 16733050 intergenic CG30463 - chr2R_7_16730001 chr2R_16730001 RAL-26 495 chr2R 16737138 16737159 chr2R 16737238 16737259 9 100 5.0 2.5 3.8 1.9 121 chr2R 16737138 3` UTR CG43104 - chr2R 16737198 3` UTR CG43104 - chr2R 16737259 exon CG43104 - chr2R_9_16735001 chr2R_16735001 RAL-26 496 chr2R 16740895 16740918 chr2R 16740989 16741012 7 91 1.0 5.0 3.0 1.8 117 chr2R 16740895 intergenic not near genes chr2R 16740954 intergenic not near genes chr2R 16741012 intergenic not near genes chr2R_7_16740001 chr2R_16740001 RAL-26 497 chr2R 16775649 16775668 chr2R 16775913 16775932 4 264 0.5 1.5 1.0 2.0 283 chr2R 16775649 3` UTR Arp53D + chr2R 16775790 intergenic Arp53D + chr2R 16775932 intergenic Arp53D + chr2R_4_16775001 chr2R_16775001 RAL-26 498 chr2R 16808752 16808765 chr2R 16808900 16808914 6 149 1.5 6.0 3.8 1.2 162 chr2R 16808752 intergenic not near genes chr2R 16808833 intergenic not near genes chr2R 16808914 intergenic not near genes chr2R_6_16805001 chr2R_16805001 RAL-26 499 chr2R 16889933 16889961 chr2R 16890298 16890325 14 365 2.5 1.0 1.8 5.0 392 chr2R 16889933 intron CG8910 - chr2R 16890129 intron CG8910 - chr2R 16890325 intron CG8910 - chr2R_14_16890001 chr2R_16890001 RAL-26 500 chr2R 17102712 17102724 chr2R 17102793 17102794 5 79 3.5 6.0 4.8 0.9 82 chr2R 17102712 5` UTR CG30456 + chr2R 17102753 5` UTR CG30456 + chr2R 17102794 5` UTR CG30456 + chr2R_5_17100001 chr2R_17100001 RAL-26 501 chr2R 17147241 17147269 chr2R 17152272 17152300 jockey 8 5031 3.5 6.0 4.8 1.4 5059 chr2R 17147241 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152300 intergenic not near genes chr2R_8_17145001 chr2R_17145001 RAL-26 502 chr2R 17176353 17176378 chr2R 17182543 17182568 diver 6 6190 1.0 2.0 1.5 2.4 6215 chr2R 17176353 intergenic not near genes chr2R 17179460 intergenic not near genes chr2R 17182568 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-26 503 chr2R 17236509 17236538 chr2R 17241713 17241742 copia 10 5204 2.5 3.5 3.0 2.5 5233 chr2R 17236509 intron mbl + chr2R 17239126 intron mbl + chr2R 17241742 intron mbl + chr2R_10_17235001 chr2R_17235001 RAL-26 504 chr2R 17388080 17388117 chr2R 17388209 17388246 10 129 8.5 7.5 8.0 1.1 166 chr2R 17388080 intron CR44344 - chr2R 17388163 intron CR44344 - chr2R 17388246 intron CR44344 - chr2R_10_17385001 chr2R_17385001 RAL-26 505 chr2R 17459015 17459034 chr2R 17459100 17459119 7 85 2.5 2.0 2.2 2.2 104 chr2R 17459015 intron CG14478 + chr2R 17459067 intron CG14478 + chr2R 17459119 intron CG14478 + chr2R_7_17455001 chr2R_17455001 RAL-26 506 chr2R 17627750 17627781 chr2R 17628077 17628108 5 327 3.5 4.0 3.8 1.0 358 chr2R 17627750 intron CG10936 - chr2R 17627929 intron CG10936 - chr2R 17628108 intron CG10936 - chr2R_5_17625001 chr2R_17625001 RAL-26 507 chr2R 17709995 17710117 chr2R 17710086 17710195 6 82 0.0 0.0 0.0 6.0 200 chr2R 17709995 intron CG6424 - chr2R 17710095 intron CG6424 - chr2R 17710195 intron CG6424 - chr2R_6_17710001 chr2R_17710001 RAL-26 508 chr2R 17784025 17784052 chr2R 17784266 17784293 pogo 7 240 4.5 3.5 4.0 1.4 268 chr2R 17784025 intergenic mir-31a - chr2R 17784159 intergenic mir-31a - chr2R 17784293 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-26 509 chr2R 17835032 17835062 chr2R 17835126 17835156 5 94 2.0 2.0 2.0 1.7 124 chr2R 17835032 intron grh + chr2R 17835094 intron grh + chr2R 17835156 intron grh + chr2R_5_17835001 chr2R_17835001 RAL-26 510 chr2R 17837189 17837215 chr2R 17837279 17837305 5 90 0.0 1.0 0.5 3.3 116 chr2R 17837189 intron grh + chr2R 17837247 intron grh + chr2R 17837305 intron grh + chr2R_5_17835001 chr2R_17835001 RAL-26 511 chr2R 17844856 17844885 chr2R 17844949 17844978 5 93 1.5 0.0 0.8 2.8 122 chr2R 17844856 intron olf186-F + chr2R 17844917 intron olf186-F + chr2R 17844978 intron olf186-F + chr2R_5_17840001 chr2R_17840001 RAL-26 512 chr2R 17918167 17918181 chr2R 17918244 17918258 4 76 2.0 0.0 1.0 2.0 91 chr2R 17918167 intron Elk + chr2R 17918212 intron Elk + chr2R 17918258 intron Elk + chr2R_4_17915001 chr2R_17915001 RAL-26 513 chr2R 18224591 18224614 chr2R 18224672 18224684 4 78 3.0 3.5 3.2 1.0 93 chr2R 18224591 intergenic not near genes chr2R 18224638 intergenic not near genes chr2R 18224684 intergenic not near genes chr2R_4_18220001 chr2R_18220001 RAL-26 514 chr2R 18402501 18402530 chr2R 18402589 18402618 6 88 1.5 3.5 2.5 1.7 117 chr2R 18402501 intergenic not near genes chr2R 18402560 intergenic not near genes chr2R 18402618 intergenic not near genes chr2R_6_18400001 chr2R_18400001 RAL-26 515 chr2R 18526672 18526688 chr2R 18526872 18526888 6 200 3.0 0.0 1.5 2.4 216 chr2R 18526672 intergenic CG43066 + chr2R 18526780 intergenic CG43066 + chr2R 18526888 intergenic CG43066 + chr2R_6_18525001 chr2R_18525001 RAL-26 516 chr2R 18553437 18553469 chr2R 18553517 18553549 8 76 0.0 1.0 0.5 5.3 112 chr2R 18553437 intergenic not near genes chr2R 18553493 intergenic not near genes chr2R 18553549 intergenic not near genes chr2R_8_18550001 chr2R_18550001 RAL-26 517 chr2R 18575802 18575831 chr2R 18581990 18582016 3S18 7 6187 2.5 3.0 2.8 1.8 6214 chr2R 18575802 intron GEFmeso - chr2R 18578909 intron GEFmeso - chr2R 18582016 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-26 518 chr2R 18590866 18590901 chr2R 18600018 18600051 roo 17 9152 2.0 6.0 4.0 3.4 9185 chr2R 18590866 intron GEFmeso - chr2R 18595458 intron GEFmeso - chr2R 18600051 intron GEFmeso - chr2R_17_18595001 chr2R_18595001 RAL-26 519 chr2R 18608632 18608638 chr2R 18608708 18608714 6 76 5.0 3.0 4.0 1.2 82 chr2R 18608632 intron GEFmeso - chr2R 18608673 intron GEFmeso - chr2R 18608714 intron GEFmeso - chr2R_6_18605001 chr2R_18605001 RAL-26 520 chr2R 18608640 18608648 chr2R 18608707 18608724 4 74 4.0 3.0 3.5 0.9 84 chr2R 18608640 intron GEFmeso - chr2R 18608682 intron GEFmeso - chr2R 18608724 intron GEFmeso - chr2R_4_18605001 chr2R_18605001 RAL-26 521 chr2R 18646419 18646433 chr2R 18646564 18646578 4 145 0.5 3.5 2.0 1.3 159 chr2R 18646419 intron SP2637 - chr2R 18646498 intron SP2637 - chr2R 18646578 intron SP2637 - chr2R_4_18645001 chr2R_18645001 RAL-26 522 chr2R 18689062 18689081 chr2R 18689149 18689175 6 90 4.0 5.0 4.5 1.1 113 chr2R 18689062 intron Sik3 + chr2R 18689118 intron Sik3 + chr2R 18689175 intron Sik3 + chr2R_6_18685001 chr2R_18685001 RAL-26 523 chr2R 18692900 18692921 chr2R 18692987 18693008 7 87 0.5 2.0 1.2 3.2 108 chr2R 18692900 intron Sik3 + chr2R 18692954 intron Sik3 + chr2R 18693008 intron Sik3 + chr2R_7_18690001 chr2R_18690001 RAL-26 524 chr2R 18713241 18713267 chr2R 18713318 18713344 6 77 2.5 2.0 2.2 1.9 103 chr2R 18713241 intergenic not near genes chr2R 18713292 intergenic not near genes chr2R 18713344 intergenic not near genes chr2R_6_18710001 chr2R_18710001 RAL-26 525 chr2R 18726888 18727093 chr2R 18726971 18727266 15 119 7.0 3.5 5.2 2.4 378 chr2R 18726888 intron Hs3st-A + chr2R 18727077 intron Hs3st-A + chr2R 18727266 intron Hs3st-A + chr2R_15_18725001 chr2R_18725001 RAL-26 526 chr2R 18953157 18953187 chr2R 18953244 18953274 6 87 3.0 0.5 1.8 2.1 117 chr2R 18953157 intron sano + chr2R 18953216 intron sano + chr2R 18953274 intron sano + chr2R_6_18950001 chr2R_18950001 RAL-26 527 chr2R 18992021 18992047 chr2R 18992162 18992188 5 141 2.5 3.0 2.8 1.3 167 chr2R 18992021 intron tn + chr2R 18992104 intron tn + chr2R 18992188 intron tn + chr2R_5_18990001 chr2R_18990001 RAL-26 528 chr2R 19084356 19084362 chr2R 19084438 19084445 6 83 5.0 2.5 3.8 1.2 89 chr2R 19084356 intron 5-HT1A + chr2R 19084400 intron 5-HT1A + chr2R 19084445 intron 5-HT1A + chr2R_6_19080001 chr2R_19080001 RAL-26 529 chr2R 19084363 19084373 chr2R 19084437 19084456 4 81 4.0 2.5 3.2 1.0 93 chr2R 19084363 intron 5-HT1A + chr2R 19084410 intron 5-HT1A + chr2R 19084456 intron 5-HT1A + chr2R_4_19080001 chr2R_19080001 RAL-26 530 chr2R 19234837 19234862 chr2R 19234919 19234944 11 82 5.0 1.5 3.2 2.6 107 chr2R 19234837 intron cora + chr2R 19234890 intron cora + chr2R 19234944 intron cora + chr2R_11_19230001 chr2R_19230001 RAL-26 531 chr2R 19331232 19331262 chr2R 19331312 19331342 15 80 2.5 3.5 3.0 3.8 110 chr2R 19331232 intron,intron Rgk1 -,CG34045 + chr2R 19331287 intron,intron Rgk1 -,CG34045 + chr2R 19331342 intron,intron Rgk1 -,CG34045 + chr2R_15_19330001 chr2R_19330001 RAL-26 532 chr2R 19334654 19334682 chr2R 19334729 19334758 13 76 2.0 2.5 2.2 4.1 104 chr2R 19334654 intron,intron Rgk1 -,CG34045 + chr2R 19334706 intron,intron Rgk1 -,CG34045 + chr2R 19334758 intron,exon Rgk1 -,CG34045 + chr2R_13_19330001 chr2R_19330001 RAL-26 533 chr2R 19536472 19536496 chr2R 19536554 19536577 7 82 1.0 4.5 2.8 1.8 105 chr2R 19536472 intron sm - chr2R 19536524 intron sm - chr2R 19536577 intron sm - chr2R_7_19535001 chr2R_19535001 RAL-26 534 chr2R 19551657 19551680 chr2R 19551768 19551791 6 110 3.0 3.0 3.0 1.5 134 chr2R 19551657 intron sm - chr2R 19551724 intron sm - chr2R 19551791 intron sm - chr2R_6_19550001 chr2R_19550001 RAL-26 535 chr2R 19588754 19588772 chr2R 19588832 19588850 6 78 0.5 2.0 1.2 2.7 96 chr2R 19588754 intron sm - chr2R 19588802 intron sm - chr2R 19588850 intron sm - chr2R_6_19585001 chr2R_19585001 RAL-26 536 chr2R 19776594 19776628 chr2R 19779917 19779951 jockey 9 3323 2.0 2.5 2.2 2.8 3357 chr2R 19776594 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779951 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-26 537 chr2R 19781904 19781935 chr2R 19781987 19782019 7 83 1.5 3.5 2.5 2.0 115 chr2R 19781904 intergenic not near genes chr2R 19781962 intergenic not near genes chr2R 19782019 intergenic not near genes chr2R_7_19780001 chr2R_19780001 RAL-26 538 chr2R 19957428 19957458 chr2R 19962630 19962660 copia 5 5202 1.0 2.5 1.8 1.8 5232 chr2R 19957428 intergenic CG44623 + chr2R 19960044 intergenic not near genes chr2R 19962660 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-26 539 chr2R 20048788 20048815 chr2R 20048888 20048914 6 99 1.0 7.0 4.0 1.2 126 chr2R 20048788 intergenic not near genes chr2R 20048851 intergenic not near genes chr2R 20048914 intergenic not near genes chr2R_6_20045001 chr2R_20045001 RAL-26 540 chr2R 20069244 20069275 chr2R 20071874 20071905 opus 6 2630 0.5 2.0 1.2 2.7 2661 chr2R 20069244 intergenic not near genes chr2R 20070574 intergenic not near genes chr2R 20071905 intergenic not near genes chr2R_6_20070001 chr2R_20070001 RAL-26 541 chr2R 20223956 20223959 chr2R 20224041 20224044 5 85 5.5 0.5 3.0 1.2 88 chr2R 20223956 intergenic not near genes chr2R 20224000 intergenic not near genes chr2R 20224044 intergenic not near genes chr2R_5_20220001 chr2R_20220001 RAL-26 542 chr2R 20326762 20326781 chr2R 20326839 20326858 5 77 4.5 1.0 2.8 1.3 96 chr2R 20326762 5` UTR MED8 - chr2R 20326810 intergenic MED8 -,CG8929 + chr2R 20326858 intergenic MED8 -,CG8929 + chr2R_5_20325001 chr2R_20325001 RAL-26 543 chr2R 20359363 20359365 chr2R 20359444 20359448 4 82 3.0 7.5 5.2 0.6 85 chr2R 20359363 intergenic not near genes chr2R 20359406 intergenic not near genes chr2R 20359448 intergenic not near genes chr2R_4_20355001 chr2R_20355001 RAL-26 544 chr2R 20523039 20523049 chr2R 20523150 20523160 5 111 5.0 2.0 3.5 1.1 121 chr2R 20523039 intergenic not near genes chr2R 20523100 intergenic not near genes chr2R 20523160 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-26 545 chr2R 20523050 20523070 chr2R 20523148 20523181 5 108 2.5 2.0 2.2 1.6 131 chr2R 20523050 intergenic not near genes chr2R 20523116 intergenic not near genes chr2R 20523181 intergenic not near genes chr2R_5_20520001 chr2R_20520001 RAL-26 546 chr2R 20708557 20708574 chr2R 20708634 20708650 4 77 8.5 6.5 7.5 0.5 93 chr2R 20708557 intron dpr + chr2R 20708604 intron dpr + chr2R 20708650 intron dpr + chr2R_4_20705001 chr2R_20705001 RAL-26 547 chr2R 20739444 20739473 chr2R 20744212 20744241 F-element 8 4767 4.5 4.0 4.2 1.5 4797 chr2R 20739444 intron dpr + chr2R 20741842 intron dpr + chr2R 20744241 intron dpr + chr2R_8_20740001 chr2R_20740001 RAL-26 548 chr2R 20760851 20760863 chr2R 20761123 20761132 5 271 0.0 0.0 0.0 5.0 281 chr2R 20760851 intergenic not near genes chr2R 20760992 intergenic not near genes chr2R 20761132 intergenic not near genes chr2R_5_20760001 chr2R_20760001 RAL-26 549 chr2R 20772285 20772300 chr2R 20772368 20772383 6 83 2.0 2.5 2.2 1.9 98 chr2R 20772285 intergenic not near genes chr2R 20772334 intergenic not near genes chr2R 20772383 intergenic not near genes chr2R_6_20770001 chr2R_20770001 RAL-26 550 chr2R 20838061 20838072 chr2R 20838142 20838151 4 80 0.0 2.0 1.0 2.0 90 chr2R 20838061 intron CR44667 + chr2R 20838106 intron CR44667 + chr2R 20838151 intron CR44667 + chr2R_4_20835001 chr2R_20835001 RAL-26 551 chr2R 20848926 20848958 chr2R 20849012 20849044 10 86 4.5 1.0 2.8 2.6 118 chr2R 20848926 exon CG17999 - chr2R 20848985 intron CG17999 - chr2R 20849044 intron CG17999 - chr2R_10_20845001 chr2R_20845001 RAL-26 552 chr2R 20894205 20894239 chr2R 20894303 20894339 7 99 2.5 5.0 3.8 1.5 134 chr2R 20894205 intron otp - chr2R 20894272 intron otp - chr2R 20894339 intron otp - chr2R_7_20890001 chr2R_20890001 RAL-26 553 chr2R 20962909 20962930 chr2R 20963007 20963028 7 98 1.5 2.0 1.8 2.5 119 chr2R 20962909 intergenic not near genes chr2R 20962968 intergenic not near genes chr2R 20963028 intergenic not near genes chr2R_7_20960001 chr2R_20960001 RAL-26 554 chr2R 20967504 20967534 chr2R 20967614 20967644 6 110 2.5 3.0 2.8 1.6 140 chr2R 20967504 intergenic not near genes chr2R 20967574 intergenic not near genes chr2R 20967644 intergenic not near genes chr2R_6_20965001 chr2R_20965001 RAL-26 555 chr2R 21043653 21043685 chr2R 21043738 21043792 8 104 5.0 0.0 2.5 2.3 139 chr2R 21043653 intergenic not near genes chr2R 21043722 intergenic not near genes chr2R 21043792 intergenic not near genes chr2R_8_21040001 chr2R_21040001 RAL-26 556 chr2R 21110788 21110815 chr2R 21110881 21110908 9 91 5.0 2.5 3.8 1.9 120 chr2R 21110788 intron ktub + chr2R 21110848 intron ktub + chr2R 21110908 intron ktub + chr2R_9_21110001 chr2R_21110001 RAL-26 557 chr2R 21290146 21290166 chr2R 21290225 21290235 6 76 0.5 2.0 1.2 2.7 89 chr2R 21290146 intron CG10505 - chr2R 21290190 intron CG10505 - chr2R 21290235 intron CG10505 - chr2R_6_21290001 chr2R_21290001 RAL-26 558 chr2R 21546786 21546816 chr2R 21546867 21546871 13 76 4.5 3.0 3.8 2.7 85 chr2R 21546786 intron Egfr + chr2R 21546828 intron Egfr + chr2R 21546871 intron Egfr + chr2R_13_21545001 chr2R_21545001 RAL-26 559 chr2R 21738279 21738305 chr2R 21747439 21747465 roo 4 9158 5.0 1.0 3.0 1.0 9186 chr2R 21738279 intergenic not near genes chr2R 21742872 intergenic not near genes chr2R 21747465 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-26 560 chr2R 21753085 21753116 chr2R 21753570 21753601 roo 5 485 0.5 2.5 1.5 2.0 516 chr2R 21753085 intergenic not near genes chr2R 21753343 intergenic not near genes chr2R 21753601 intergenic not near genes chr2R_5_21750001 chr2R_21750001 RAL-26 561 chr2R 21796458 21796485 chr2R 21796542 21796568 4 84 1.0 2.0 1.5 1.6 110 chr2R 21796458 5` UTR CG34204 + chr2R 21796513 5` UTR CG34204 + chr2R 21796568 exon CG34204 + chr2R_4_21795001 chr2R_21795001 RAL-26 562 chr2R 21797872 21797895 chr2R 21797948 21797971 11 76 6.0 0.0 3.0 2.8 99 chr2R 21797872 intergenic CG18735 - chr2R 21797922 intergenic CG18735 - chr2R 21797971 intergenic CG18735 - chr2R_11_21795001 chr2R_21795001 RAL-26 563 chr2R 21809530 21809557 chr2R 21817770 21817797 roo 6 8240 3.0 2.5 2.8 1.6 8267 chr2R 21809530 intergenic not near genes chr2R 21813664 intergenic not near genes chr2R 21817797 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-26 564 chr2R 21906273 21906547 chr2R 21906374 21906634 10 92 2.0 2.0 2.0 3.3 361 chr2R 21906273 intron Fili + chr2R 21906454 intron Fili + chr2R 21906634 intron Fili + chr2R_10_21905001 chr2R_21905001 RAL-26 565 chr2R 21912756 21912775 chr2R 21912837 21912856 4 78 1.5 1.5 1.5 1.6 100 chr2R 21912756 intron Fili + chr2R 21912806 intron Fili + chr2R 21912856 intron Fili + chr2R_4_21910001 chr2R_21910001 RAL-26 566 chr2R 21919887 21919904 chr2R 21919960 21919992 4 84 1.5 1.5 1.5 1.6 105 chr2R 21919887 intron Fili + chr2R 21919940 intron Fili + chr2R 21919992 intron Fili + chr2R_4_21915001 chr2R_21915001 RAL-26 567 chr2R 21963196 21963217 chr2R 21963281 21963302 8 85 0.5 0.0 0.2 6.7 106 chr2R 21963196 intergenic not near genes chr2R 21963249 intergenic not near genes chr2R 21963302 intergenic not near genes chr2R_8_21960001 chr2R_21960001 RAL-26 568 chr2R 22135437 22135467 chr2R 22135546 22135576 12 107 2.0 1.5 1.8 4.3 139 chr2R 22135437 intergenic not near genes chr2R 22135506 intergenic not near genes chr2R 22135576 intergenic not near genes chr2R_12_22135001 chr2R_22135001 RAL-26 569 chr2R 22185673 22185709 chr2R 22185772 22185808 8 99 1.0 0.0 0.5 5.3 135 chr2R 22185673 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185808 3` UTR MED16 + chr2R_8_22185001 chr2R_22185001 RAL-26 570 chr2R 22272080 22272103 chr2R 22272182 22272205 9 102 1.5 6.0 3.8 1.9 125 chr2R 22272080 intron dve + chr2R 22272142 intron dve + chr2R 22272205 intron dve + chr2R_9_22270001 chr2R_22270001 RAL-26 571 chr2R 22349691 22349725 chr2R 22351475 22351509 jockey 7 1783 3.0 2.0 2.5 2.0 1818 chr2R 22349691 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351509 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-26 572 chr2R 22361663 22361692 chr2R 22361839 22361850 6 173 3.0 5.5 4.2 1.2 187 chr2R 22361663 intron Liprin-gamma - chr2R 22361756 intron Liprin-gamma - chr2R 22361850 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-26 573 chr2R 22465317 22465345 chr2R 22465510 22465544 BS 4 194 0.0 0.5 0.2 3.3 227 chr2R 22465317 intron CG10384 + chr2R 22465430 intron CG10384 + chr2R 22465544 intron CG10384 + chr2R_4_22465001 chr2R_22465001 RAL-26 574 chr2R 22525760 22525775 chr2R 22529315 22529330 jockey 4 3555 2.5 1.0 1.8 1.4 3570 chr2R 22525760 intron px - chr2R 22527545 intron px - chr2R 22529330 intron px - chr2R_4_22525001 chr2R_22525001 RAL-26 575 chr2R 22560648 22560685 chr2R 22560725 22560762 13 77 0.5 3.0 1.8 4.6 114 chr2R 22560648 intron px - chr2R 22560705 intron px - chr2R 22560762 5` UTR px - chr2R_13_22560001 chr2R_22560001 RAL-26 576 chr2R 22575672 22575694 chr2R 22575746 22575773 6 78 2.0 2.0 2.0 2.0 101 chr2R 22575672 intron dnr1 - chr2R 22575722 intron dnr1 - chr2R 22575773 intron dnr1 - chr2R_6_22575001 chr2R_22575001 RAL-26 577 chr2R 22769120 22769145 chr2R 22769213 22769238 7 93 1.0 2.0 1.5 2.8 118 chr2R 22769120 intron CG42260 - chr2R 22769179 intron CG42260 - chr2R 22769238 intron CG42260 - chr2R_7_22765001 chr2R_22765001 RAL-26 578 chr2R 22774963 22774997 chr2R 22775382 22775416 jockey 5 419 2.0 0.5 1.2 2.3 453 chr2R 22774963 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775416 intron CG42260 - chr2R_5_22775001 chr2R_22775001 RAL-26 579 chr2R 22991642 22991651 chr2R 22991734 22991743 4 92 2.5 2.5 2.5 1.1 101 chr2R 22991642 intron twi + chr2R 22991692 intron twi + chr2R 22991743 intron twi + chr2R_4_22990001 chr2R_22990001 RAL-26 580 chr2R 23052650 23052688 chr2R 23052726 23052764 8 75 2.0 1.0 1.5 3.2 114 chr2R 23052650 intergenic not near genes chr2R 23052707 intergenic not near genes chr2R 23052764 intergenic not near genes chr2R_8_23050001 chr2R_23050001 RAL-26 581 chr2R 23104181 23104214 chr2R 23105612 23105645 6 1430 3.0 1.5 2.2 1.9 1464 chr2R 23104181 exon Gr59d - chr2R 23104913 exon Gr59d - chr2R 23105645 intergenic Gr59d - chr2R_6_23100001 chr2R_23100001 RAL-26 582 chr2R 23134838 23134848 chr2R 23134921 23134931 4 83 3.5 6.5 5.0 0.7 93 chr2R 23134838 intergenic not near genes chr2R 23134884 intergenic not near genes chr2R 23134931 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RAL-26 583 chr2R 23348804 23348835 chr2R 23348884 23348915 11 80 3.0 3.0 3.0 2.8 111 chr2R 23348804 intergenic not near genes chr2R 23348860 intergenic not near genes chr2R 23348915 intergenic not near genes chr2R_11_23345001 chr2R_23345001 RAL-26 584 chr2R 23351928 23351946 chr2R 23352014 23352032 8 86 0.5 4.5 2.5 2.3 104 chr2R 23351928 exon CG34210 + chr2R 23351980 3` UTR CG34210 + chr2R 23352032 3` UTR CG34210 + chr2R_8_23350001 chr2R_23350001 RAL-26 585 chr2R 23423743 23423774 chr2R 23423901 23423932 8 158 0.5 2.0 1.2 3.6 189 chr2R 23423743 intron CG9815 - chr2R 23423838 intron CG9815 - chr2R 23423932 intron CG9815 - chr2R_8_23420001 chr2R_23420001 RAL-26 586 chr2R 23429215 23429238 chr2R 23429440 23429463 6 224 3.5 2.0 2.8 1.6 248 chr2R 23429215 intron CG9815 - chr2R 23429339 intron CG9815 - chr2R 23429463 intron CG9815 - chr2R_6_23425001 chr2R_23425001 RAL-26 587 chr2R 23529573 23529605 chr2R 23537149 23537181 412 10 7575 4.5 3.0 3.8 2.1 7608 chr2R 23529573 intron bw - chr2R 23533377 intron bw - chr2R 23537181 exon bw - chr2R_10_23530001 chr2R_23530001 RAL-26 588 chr2R 23563901 23563917 chr2R 23563981 23563996 4 80 4.0 2.0 3.0 1.0 95 chr2R 23563901 3` UTR Pi3K59F + chr2R 23563948 3` UTR Pi3K59F + chr2R 23563996 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_4_23560001 chr2R_23560001 RAL-26 589 chr2R 23607035 23607191 chr2R 23607116 23607284 8 82 2.5 2.0 2.2 2.5 249 chr2R 23607035 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607284 intron CG17664 - chr2R_8_23605001 chr2R_23605001 RAL-26 590 chr2R 23663371 23663401 chr2R 23663447 23663477 4 76 2.5 2.0 2.2 1.2 106 chr2R 23663371 intron Pde8 + chr2R 23663424 intron Pde8 + chr2R 23663477 intron Pde8 + chr2R_4_23660001 chr2R_23660001 RAL-26 591 chr2R 23739190 23739210 chr2R 23739268 23739288 7 78 2.0 1.5 1.8 2.5 98 chr2R 23739190 intron egl - chr2R 23739239 intron egl - chr2R 23739288 intron egl - chr2R_7_23735001 chr2R_23735001 RAL-26 592 chr2R 23758325 23758354 chr2R 23758401 23758422 8 72 3.0 2.0 2.5 2.3 97 chr2R 23758325 intron CG9850 - chr2R 23758374 intron CG9850 - chr2R 23758422 intron CG9850 - chr2R_8_23755001 chr2R_23755001 RAL-26 593 chr2R 23914300 23914331 chr2R 23921924 23921954 412 8 7624 3.5 4.5 4.0 1.6 7654 chr2R 23914300 exon kcc + chr2R 23918127 intron kcc + chr2R 23921954 intron kcc + chr2R_8_23915001 chr2R_23915001 RAL-26 594 chr2R 24031379 24031414 chr2R 24031463 24031498 9 84 2.0 1.5 1.8 3.2 119 chr2R 24031379 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031498 intergenic Chi -,CG30172 - chr2R_9_24030001 chr2R_24030001 RAL-26 595 chr2R 24147069 24147089 chr2R 24154647 24154667 412 6 7578 3.5 9.0 6.2 0.8 7598 chr2R 24147069 intron Dat + chr2R 24150868 intron Dat + chr2R 24154667 intron Dat + chr2R_6_24150001 chr2R_24150001 RAL-26 596 chr2R 24204656 24204683 chr2R 24204817 24204844 5 156 2.0 3.0 2.5 1.4 188 chr2R 24204656 intron CG11406 - chr2R 24204750 intron CG11406 - chr2R 24204844 intron CG11406 - chr2R_5_24200001 chr2R_24200001 RAL-26 597 chr2R 24210401 24210431 chr2R 24210572 24210582 9 168 0.5 3.0 1.8 3.2 181 chr2R 24210401 intergenic not near genes chr2R 24210492 intergenic not near genes chr2R 24210582 intergenic not near genes chr2R_9_24210001 chr2R_24210001 RAL-26 598 chr2R 24353429 24353450 chr2R 24361791 24361812 roo 4 8362 1.0 4.5 2.8 1.1 8383 chr2R 24353429 intron,intron bs +,CR44811 - chr2R 24357620 intron,intron bs +,CR44811 - chr2R 24361812 intron,intron bs +,CR44811 - chr2R_4_24355001 chr2R_24355001 RAL-26 599 chr2R 24430922 24430948 chr2R 24431010 24431036 7 88 0.0 1.5 0.8 3.9 114 chr2R 24430922 intergenic CG15873 -,Pgam5-2 - chr2R 24430979 intergenic CG15873 -,Pgam5-2 - chr2R 24431036 intergenic Pgam5-2 -,CG15873 - chr2R_7_24430001 chr2R_24430001 RAL-26 600 chr2R 24435611 24435645 chr2R 24435707 24435741 6 96 1.0 4.5 2.8 1.6 130 chr2R 24435611 intergenic not near genes chr2R 24435676 intergenic not near genes chr2R 24435741 intergenic not near genes chr2R_6_24435001 chr2R_24435001 RAL-26 601 chr2R 24590112 24590145 chr2R 24590204 24590237 17 91 4.0 2.5 3.2 4.0 125 chr2R 24590112 intron pio + chr2R 24590174 intron pio + chr2R 24590237 intron pio + chr2R_17_24590001 chr2R_24590001 RAL-26 602 chr2R 24591519 24591547 chr2R 24591595 24591623 8 76 1.5 2.0 1.8 2.9 104 chr2R 24591519 intron pio + chr2R 24591571 intron pio + chr2R 24591623 intron pio + chr2R_8_24590001 chr2R_24590001 RAL-26 603 chr2R 24689726 24689756 chr2R 24689815 24689845 4 89 2.5 1.5 2.0 1.3 119 chr2R 24689726 intergenic not near genes chr2R 24689786 intergenic not near genes chr2R 24689845 intergenic not near genes chr2R_4_24685001 chr2R_24685001 RAL-26 604 chr2R 24727884 24727913 chr2R 24735392 24735421 mdg1 7 7508 4.0 4.0 4.0 1.4 7537 chr2R 24727884 intron Mid1 - chr2R 24731652 intron Mid1 - chr2R 24735421 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-26 605 chr2R 24763612 24763642 chr2R 24765586 24765616 G2 7 1975 3.5 4.0 3.8 1.5 2004 chr2R 24763612 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765616 exon CG3894 + chr2R_7_24760001 chr2R_24760001 RAL-26 606 chr2R 24790995 24791015 chr2R 24791107 24791139 8 122 3.5 2.0 2.8 2.1 144 chr2R 24790995 intron Reg-5 - chr2R 24791067 intron Reg-5 - chr2R 24791139 intron Reg-5 - chr2R_8_24790001 chr2R_24790001 RAL-26 607 chr2R 24859849 24859867 chr2R 24859935 24859950 7 86 1.5 2.5 2.0 2.3 101 chr2R 24859849 5` UTR CR44829 + chr2R 24859900 5` UTR CR44829 + chr2R 24859950 5` UTR CR44829 + chr2R_7_24855001 chr2R_24855001 RAL-26 608 chr2R 24897921 24897949 chr2R 24898001 24898030 6 78 3.0 2.0 2.5 1.7 109 chr2R 24897921 intron,3` UTR NaCP60E +,Tpc2 - chr2R 24897976 intron,3` UTR NaCP60E +,Tpc2 - chr2R 24898030 intron,3` UTR NaCP60E +,Tpc2 - chr2R_6_24895001 chr2R_24895001 RAL-26 609 chr2R 25004891 25004919 chr2R 25004968 25004997 8 77 1.5 2.5 2.0 2.7 106 chr2R 25004891 intron zip - chr2R 25004944 intron zip - chr2R 25004997 intron zip - chr2R_8_25000001 chr2R_25000001 RAL-26 610 chr2R 25014545 25014576 chr2R 25014621 25014652 14 76 2.0 0.5 1.2 6.4 107 chr2R 25014545 intron uzip + chr2R 25014598 intron uzip + chr2R 25014652 intron uzip + chr2R_14_25010001 chr2R_25010001 RAL-26 611 chr2R 25018338 25018371 chr2R 25018439 25018472 9 101 3.0 3.0 3.0 2.2 134 chr2R 25018338 intron uzip + chr2R 25018405 intron uzip + chr2R 25018472 intron uzip + chr2R_9_25015001 chr2R_25015001 RAL-26 612 chr2R 25081609 25081628 chr2R 25082705 25082716 7 1095 4.0 2.5 3.2 1.7 1107 chr2R 25081609 intron gol - chr2R 25082162 intron gol - chr2R 25082716 intron gol - chr2R_7_25080001 chr2R_25080001 RAL-26 613 chr2R 25122961 25122993 chr2R 25123040 25123072 5 79 1.0 1.0 1.0 2.5 111 chr2R 25122961 intron lov - chr2R 25123016 intron lov - chr2R 25123072 intron lov - chr2R_5_25120001 chr2R_25120001 RAL-26 614 chr2R 25253443 25253467 chr2R 25253519 25253543 7 75 0.5 1.0 0.8 3.9 100 chr2R 25253443 intron,intron CG9380 -,CG30428 + chr2R 25253493 intron,intron CG9380 -,CG30428 + chr2R 25253543 intron,intron CG9380 -,CG30428 + chr2R_7_25250001 chr2R_25250001 RAL-26 615 chr3L 68980 69014 chr3L 69067 69101 10 87 1.5 1.5 1.5 4.0 121 chr3L 68980 3` UTR Lsp1gamma + chr3L 69040 intergenic Lsp1gamma +,CR44510 + chr3L 69101 intergenic CR44510 +,Lsp1gamma + chr3L_10_65001 chr3L_65001 RAL-26 616 chr3L 88749 88779 chr3L 90669 90699 4 1920 1.5 1.5 1.5 1.6 1950 chr3L 88749 intergenic not near genes chr3L 89724 intergenic not near genes chr3L 90699 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-26 617 chr3L 110210 110244 chr3L 119377 119411 roo 4 9167 3.0 1.5 2.2 1.2 9201 chr3L 110210 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119411 intergenic not near genes chr3L_4_110001 chr3L_110001 RAL-26 618 chr3L 339446 339464 chr3L 339529 339547 8 83 0.0 2.0 1.0 4.0 101 chr3L 339446 intron,intron Ptpmeg +,mthl10 - chr3L 339496 intron,intron Ptpmeg +,mthl10 - chr3L 339547 intron,intron Ptpmeg +,mthl10 - chr3L_8_335001 chr3L_335001 RAL-26 619 chr3L 402687 402716 chr3L 409740 409769 297 13 7053 5.5 3.0 4.2 2.5 7082 chr3L 402687 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409769 intergenic not near genes chr3L_13_405001 chr3L_405001 RAL-26 620 chr3L 421054 421087 chr3L 421148 421183 11 96 1.5 2.0 1.8 3.9 129 chr3L 421054 intergenic not near genes chr3L 421118 intergenic not near genes chr3L 421183 intergenic not near genes chr3L_11_420001 chr3L_420001 RAL-26 621 chr3L 461689 461721 chr3L 461785 461814 10 96 4.0 3.0 3.5 2.2 125 chr3L 461689 intron klar - chr3L 461752 intron klar - chr3L 461814 intron klar - chr3L_10_460001 chr3L_460001 RAL-26 622 chr3L 534779 534807 chr3L 535035 535063 7 256 1.0 1.0 1.0 3.5 284 chr3L 534779 intron klar - chr3L 534921 intron klar - chr3L 535063 intron klar - chr3L_7_530001 chr3L_530001 RAL-26 623 chr3L 559521 559553 chr3L 559910 559923 8 387 0.5 0.5 0.5 5.3 402 chr3L 559521 intron hipk + chr3L 559722 intron hipk + chr3L 559923 intron hipk + chr3L_8_555001 chr3L_555001 RAL-26 624 chr3L 651386 651418 chr3L 651474 651506 7 88 2.0 1.5 1.8 2.5 120 chr3L 651386 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651506 intergenic CG3402 -,Gale + chr3L_7_650001 chr3L_650001 RAL-26 625 chr3L 732823 732837 chr3L 733045 733059 4 222 2.0 3.5 2.8 1.1 236 chr3L 732823 intergenic not near genes chr3L 732941 intergenic not near genes chr3L 733059 intergenic not near genes chr3L_4_730001 chr3L_730001 RAL-26 626 chr3L 858003 858030 chr3L 866484 866511 Tirant 10 8476 5.0 3.5 4.2 1.9 8508 chr3L 858003 intergenic not near genes chr3L 862257 intergenic not near genes chr3L 866511 5` UTR CG12502 + chr3L_10_860001 chr3L_860001 RAL-26 627 chr3L 875658 875690 chr3L 875745 875777 14 87 2.5 4.0 3.2 3.3 119 chr3L 875658 intron CG32479 + chr3L 875718 intron CG32479 + chr3L 875777 intron CG32479 + chr3L_14_875001 chr3L_875001 RAL-26 628 chr3L 901436 901453 chr3L 901507 901537 7 82 2.5 2.0 2.2 2.2 101 chr3L 901436 intergenic not near genes chr3L 901486 intergenic not near genes chr3L 901537 intergenic not near genes chr3L_7_900001 chr3L_900001 RAL-26 629 chr3L 922171 922183 chr3L 922248 922260 7 77 4.5 2.0 3.2 1.7 89 chr3L 922171 intron Glut1 + chr3L 922216 intron Glut1 + chr3L 922260 intron Glut1 + chr3L_7_920001 chr3L_920001 RAL-26 630 chr3L 925175 925197 chr3L 932601 932623 mdg1 6 7426 2.0 1.5 1.8 2.1 7448 chr3L 925175 intron Glut1 + chr3L 928899 intron Glut1 + chr3L 932623 intron Glut1 + chr3L_6_925001 chr3L_925001 RAL-26 631 chr3L 933910 933942 chr3L 934013 934045 7 103 0.5 1.5 1.0 3.5 135 chr3L 933910 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934045 intron Glut1 + chr3L_7_930001 chr3L_930001 RAL-26 632 chr3L 939774 939802 chr3L 940895 940923 jockey 8 1121 2.0 2.5 2.2 2.5 1149 chr3L 939774 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940923 intron Glut1 + chr3L_8_940001 chr3L_940001 RAL-26 633 chr3L 949892 949921 chr3L 949977 950006 8 85 3.5 4.0 3.8 1.7 114 chr3L 949892 intron Glut1 + chr3L 949949 intron Glut1 + chr3L 950006 intron Glut1 + chr3L_8_945001 chr3L_945001 RAL-26 634 chr3L 958316 958348 chr3L 958400 958432 11 84 2.5 3.0 2.8 2.9 116 chr3L 958316 intron Glut1 + chr3L 958374 intron Glut1 + chr3L 958432 intron Glut1 + chr3L_11_955001 chr3L_955001 RAL-26 635 chr3L 987454 987472 chr3L 987539 987557 5 85 5.5 4.5 5.0 0.8 103 chr3L 987454 intergenic not near genes chr3L 987506 intergenic not near genes chr3L 987557 intergenic not near genes chr3L_5_985001 chr3L_985001 RAL-26 636 chr3L 1011020 1011028 chr3L 1011093 1011109 5 79 3.5 2.5 3.0 1.2 89 chr3L 1011020 intron trio - chr3L 1011064 intron trio - chr3L 1011109 intron trio - chr3L_5_1010001 chr3L_1010001 RAL-26 637 chr3L 1015138 1015169 chr3L 1015226 1015257 5 88 1.5 2.0 1.8 1.8 119 chr3L 1015138 intron trio - chr3L 1015198 intron trio - chr3L 1015257 intron trio - chr3L_5_1015001 chr3L_1015001 RAL-26 638 chr3L 1040554 1040569 chr3L 1040638 1040653 5 84 5.0 2.5 3.8 1.0 99 chr3L 1040554 intron bab1 - chr3L 1040604 intron bab1 - chr3L 1040653 intron bab1 - chr3L_5_1040001 chr3L_1040001 RAL-26 639 chr3L 1047356 1047368 chr3L 1055168 1055177 412 4 7811 1.5 4.0 2.8 1.1 7821 chr3L 1047356 intron bab1 - chr3L 1051266 intron bab1 - chr3L 1055177 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-26 640 chr3L 1047376 1047384 chr3L 1055162 1055196 412 4 7806 1.0 4.0 2.5 1.1 7820 chr3L 1047376 intron bab1 - chr3L 1051286 intron bab1 - chr3L 1055196 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-26 641 chr3L 1145245 1145268 chr3L 1145324 1145347 4 78 1.5 0.0 0.8 2.2 102 chr3L 1145245 intron bab2 - chr3L 1145296 intron bab2 - chr3L 1145347 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-26 642 chr3L 1219595 1219621 chr3L 1227328 1227354 412 9 7731 2.5 4.5 3.5 2.0 7759 chr3L 1219595 intron mwh + chr3L 1223474 intron mwh + chr3L 1227354 intron mwh + chr3L_9_1220001 chr3L_1220001 RAL-26 643 chr3L 1260147 1260160 chr3L 1260227 1260240 4 80 1.0 2.5 1.8 1.4 93 chr3L 1260147 intron CG9134 + chr3L 1260194 intron CG9134 + chr3L 1260240 intron CG9134 + chr3L_4_1260001 chr3L_1260001 RAL-26 644 chr3L 1285823 1285854 chr3L 1285918 1285949 5 95 3.0 3.5 3.2 1.2 126 chr3L 1285823 intron CG32333 + chr3L 1285886 intron CG32333 + chr3L 1285949 intron CG32333 + chr3L_5_1285001 chr3L_1285001 RAL-26 645 chr3L 1347157 1347186 chr3L 1347242 1347271 11 83 3.5 4.0 3.8 2.3 114 chr3L 1347157 intron Ptp61F - chr3L 1347214 intron Ptp61F - chr3L 1347271 intron Ptp61F - chr3L_11_1345001 chr3L_1345001 RAL-26 646 chr3L 1349688 1349717 chr3L 1349774 1349805 8 87 3.5 5.0 4.2 1.5 117 chr3L 1349688 intron Ptp61F - chr3L 1349746 intron Ptp61F - chr3L 1349805 intron Ptp61F - chr3L_8_1345001 chr3L_1345001 RAL-26 647 chr3L 1371681 1371697 chr3L 1371865 1371881 7 184 1.0 2.5 1.8 2.5 200 chr3L 1371681 intron,intron Ptp61F -,ru + chr3L 1371781 intron,intron Ptp61F -,ru + chr3L 1371881 intron,intron Ptp61F -,ru + chr3L_7_1370001 chr3L_1370001 RAL-26 648 chr3L 1374432 1374688 chr3L 1374508 1374774 9 80 2.5 0.5 1.5 3.6 342 chr3L 1374432 intron,intron Ptp61F -,ru + chr3L 1374603 intron,intron Ptp61F -,ru + chr3L 1374774 intron,intron Ptp61F -,ru + chr3L_9_1370001 chr3L_1370001 RAL-26 649 chr3L 1501996 1502016 chr3L 1502077 1502097 4 81 1.0 3.0 2.0 1.3 101 chr3L 1501996 intron pUf68 - chr3L 1502046 intron pUf68 - chr3L 1502097 intron pUf68 - chr3L_4_1500001 chr3L_1500001 RAL-26 650 chr3L 1505999 1506032 chr3L 1513596 1513629 17.6 7 7597 2.0 1.5 1.8 2.5 7630 chr3L 1505999 intron,intron Psa +,cue - chr3L 1509814 intron,intron Psa +,cue - chr3L 1513629 intron,intron Psa +,cue - chr3L_7_1505001 chr3L_1505001 RAL-26 651 chr3L 1848640 1848668 chr3L 1848718 1848746 5 78 0.0 2.0 1.0 2.5 106 chr3L 1848640 intergenic not near genes chr3L 1848693 intergenic not near genes chr3L 1848746 intergenic not near genes chr3L_5_1845001 chr3L_1845001 RAL-26 652 chr3L 1996027 1996042 chr3L 1996109 1996124 4 82 7.0 3.0 5.0 0.7 97 chr3L 1996027 intergenic not near genes chr3L 1996076 intergenic not near genes chr3L 1996124 intergenic not near genes chr3L_4_1995001 chr3L_1995001 RAL-26 653 chr3L 2033438 2033463 chr3L 2033523 2033548 5 85 1.5 1.0 1.2 2.3 110 chr3L 2033438 intergenic not near genes chr3L 2033493 intergenic not near genes chr3L 2033548 intergenic not near genes chr3L_5_2030001 chr3L_2030001 RAL-26 654 chr3L 2168784 2168807 chr3L 2168875 2168898 7 90 3.5 4.0 3.8 1.5 114 chr3L 2168784 exon CG15879 - chr3L 2168841 intron CG15879 - chr3L 2168898 intron CG15879 - chr3L_7_2165001 chr3L_2165001 RAL-26 655 chr3L 2279051 2279065 chr3L 2279198 2279212 7 147 0.0 2.5 1.2 3.2 161 chr3L 2279051 intergenic not near genes chr3L 2279132 intergenic not near genes chr3L 2279212 intergenic not near genes chr3L_7_2275001 chr3L_2275001 RAL-26 656 chr3L 2308009 2308029 chr3L 2308115 2308135 4 106 0.5 2.5 1.5 1.6 126 chr3L 2308009 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308135 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-26 657 chr3L 2447507 2447537 chr3L 2456663 2456693 roo 14 9155 1.5 3.0 2.2 4.4 9186 chr3L 2447507 intron CG45186 + chr3L 2452100 intron CG45186 + chr3L 2456693 intron CG45186 + chr3L_14_2450001 chr3L_2450001 RAL-26 658 chr3L 2478884 2479036 chr3L 2478964 2479127 11 94 1.0 3.0 2.0 3.7 243 chr3L 2478884 intron CG45186 + chr3L 2479006 intron CG45186 + chr3L 2479127 intron CG45186 + chr3L_11_2475001 chr3L_2475001 RAL-26 659 chr3L 2533650 2533680 chr3L 2533732 2533762 7 82 3.5 3.0 3.2 1.7 112 chr3L 2533650 intron Spn - chr3L 2533706 intron Spn - chr3L 2533762 intron Spn - chr3L_7_2530001 chr3L_2530001 RAL-26 660 chr3L 2623389 2623408 chr3L 2623470 2623495 10 86 3.5 1.5 2.5 2.9 106 chr3L 2623389 intron Pxn - chr3L 2623442 intron Pxn - chr3L 2623495 intron Pxn - chr3L_10_2620001 chr3L_2620001 RAL-26 661 chr3L 2683959 2683974 chr3L 2684020 2684050 4 72 0.5 2.0 1.2 1.8 91 chr3L 2683959 intron Fife - chr3L 2684004 intron Fife - chr3L 2684050 intron Fife - chr3L_4_2680001 chr3L_2680001 RAL-26 662 chr3L 2766738 2766764 chr3L 2766835 2766861 5 97 1.0 0.5 0.8 2.8 123 chr3L 2766738 intergenic Mrtf -,Non2 + chr3L 2766800 intergenic Non2 +,Mrtf - chr3L 2766861 intergenic Non2 +,Mrtf - chr3L_5_2765001 chr3L_2765001 RAL-26 663 chr3L 2854485 2854499 chr3L 2854563 2854577 5 77 2.5 3.0 2.8 1.3 92 chr3L 2854485 intron CG43444 - chr3L 2854531 intron CG43444 - chr3L 2854577 intron CG43444 - chr3L_5_2850001 chr3L_2850001 RAL-26 664 chr3L 3254080 3254117 chr3L 3254170 3254207 4 90 0.5 2.0 1.2 1.8 127 chr3L 3254080 5` UTR CR43626 + chr3L 3254144 5` UTR CR43626 + chr3L 3254207 5` UTR CR43626 + chr3L_4_3250001 chr3L_3250001 RAL-26 665 chr3L 3259818 3259833 chr3L 3259918 3259933 5 100 0.5 0.5 0.5 3.3 115 chr3L 3259818 intron ckd + chr3L 3259876 intron ckd + chr3L 3259933 intron ckd + chr3L_5_3255001 chr3L_3255001 RAL-26 666 chr3L 3281439 3281458 chr3L 3281935 3281954 Doc 5 494 4.5 7.5 6.0 0.7 515 chr3L 3281439 intron CG12017 + chr3L 3281696 intron CG12017 + chr3L 3281954 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-26 667 chr3L 3281459 3281473 chr3L 3281934 3281965 Doc 10 493 2.0 7.0 4.5 1.8 506 chr3L 3281459 intron CG12017 + chr3L 3281712 intron CG12017 + chr3L 3281965 intron CG12017 + chr3L_10_3280001 chr3L_3280001 RAL-26 668 chr3L 3436296 3436315 chr3L 3436371 3436394 4 78 1.5 1.0 1.2 1.8 98 chr3L 3436296 intron eIF5B - chr3L 3436345 intron eIF5B - chr3L 3436394 intron eIF5B - chr3L_4_3435001 chr3L_3435001 RAL-26 669 chr3L 3475076 3475100 chr3L 3475520 3475543 jockey 6 444 2.5 4.0 3.2 1.4 467 chr3L 3475076 intron CG42324 + chr3L 3475310 intron CG42324 + chr3L 3475543 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-26 670 chr3L 3551439 3551470 chr3L 3551528 3551559 5 88 2.5 5.0 3.8 1.0 120 chr3L 3551439 intron Eip63E + chr3L 3551499 intron Eip63E + chr3L 3551559 intron Eip63E + chr3L_5_3550001 chr3L_3550001 RAL-26 671 chr3L 3763757 3763774 chr3L 3763838 3763855 8 81 2.0 0.0 1.0 4.0 98 chr3L 3763757 intron CG32264 - chr3L 3763806 intron CG32264 - chr3L 3763855 intron CG32264 - chr3L_8_3760001 chr3L_3760001 RAL-26 672 chr3L 3848438 3848477 chr3L 3848514 3848553 7 76 1.0 2.0 1.5 2.8 115 chr3L 3848438 intron Awh + chr3L 3848496 intron Awh + chr3L 3848553 intron Awh + chr3L_7_3845001 chr3L_3845001 RAL-26 673 chr3L 3921391 3921412 chr3L 3921655 3921676 5 261 2.0 4.5 3.2 1.2 285 chr3L 3921391 intron Eip63F-1 - chr3L 3921534 intron Eip63F-1 - chr3L 3921676 intron Eip63F-1 - chr3L_5_3920001 chr3L_3920001 RAL-26 674 chr3L 4015732 4015762 chr3L 4015815 4015845 7 83 0.0 0.5 0.2 5.8 113 chr3L 4015732 intergenic not near genes chr3L 4015788 intergenic not near genes chr3L 4015845 intergenic not near genes chr3L_7_4015001 chr3L_4015001 RAL-26 675 chr3L 4597214 4597245 chr3L 4597296 4597327 10 81 3.0 2.5 2.8 2.6 113 chr3L 4597214 intron Src64B - chr3L 4597270 intron Src64B - chr3L 4597327 intron Src64B - chr3L_10_4595001 chr3L_4595001 RAL-26 676 chr3L 4607282 4607292 chr3L 4607373 4607383 4 91 1.0 3.0 2.0 1.3 101 chr3L 4607282 intron Src64B - chr3L 4607332 intron Src64B - chr3L 4607383 intron Src64B - chr3L_4_4605001 chr3L_4605001 RAL-26 677 chr3L 4772899 4772922 chr3L 4773311 4773334 5 412 2.5 3.5 3.0 1.2 435 chr3L 4772899 intron RhoGEF64C + chr3L 4773116 intron RhoGEF64C + chr3L 4773334 intron RhoGEF64C + chr3L_5_4770001 chr3L_4770001 RAL-26 678 chr3L 4942722 4942757 chr3L 4942802 4942837 8 80 3.0 2.0 2.5 2.3 115 chr3L 4942722 intron Con - chr3L 4942780 intron Con - chr3L 4942837 intron Con - chr3L_8_4940001 chr3L_4940001 RAL-26 679 chr3L 4959628 4959671 chr3L 4960079 4960113 5 447 0.0 1.5 0.8 2.8 485 chr3L 4959628 intron Con - chr3L 4959870 intron Con - chr3L 4960113 intron Con - chr3L_5_4955001 chr3L_4955001 RAL-26 680 chr3L 4967142 4967176 chr3L 4967249 4967283 6 103 1.0 1.5 1.2 2.7 141 chr3L 4967142 intron Con - chr3L 4967212 intron Con - chr3L 4967283 intron Con - chr3L_6_4965001 chr3L_4965001 RAL-26 681 chr3L 4989181 4989192 chr3L 4989271 4989282 4 90 0.0 0.0 0.0 4.0 101 chr3L 4989181 intron Con - chr3L 4989232 intron Con - chr3L 4989282 intron Con - chr3L_4_4985001 chr3L_4985001 RAL-26 682 chr3L 5030772 5030797 chr3L 5030848 5030873 11 75 3.0 5.5 4.2 2.1 101 chr3L 5030772 intron Con - chr3L 5030822 intron Con - chr3L 5030873 intron Con - chr3L_11_5030001 chr3L_5030001 RAL-26 683 chr3L 5034164 5034192 chr3L 5043316 5043344 roo 4 9150 0.0 1.0 0.5 2.7 9180 chr3L 5034164 intron Con - chr3L 5038754 intron Con - chr3L 5043344 intron Con - chr3L_4_5035001 chr3L_5035001 RAL-26 684 chr3L 5045455 5045485 chr3L 5050236 5050266 Doc 4 4781 1.0 0.5 0.8 2.2 4811 chr3L 5045455 intron Con - chr3L 5047860 intron Con - chr3L 5050266 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-26 685 chr3L 5054941 5054971 chr3L 5055021 5055050 11 78 4.5 6.5 5.5 1.7 109 chr3L 5054941 intron Con - chr3L 5054996 intron Con - chr3L 5055050 intron Con - chr3L_11_5050001 chr3L_5050001 RAL-26 686 chr3L 5212239 5212269 chr3L 5212322 5212352 13 81 3.5 4.5 4.0 2.6 113 chr3L 5212239 intron shep - chr3L 5212296 intron shep - chr3L 5212352 intron shep - chr3L_13_5210001 chr3L_5210001 RAL-26 687 chr3L 5250081 5250109 chr3L 5250159 5250187 5 76 0.0 2.5 1.2 2.3 106 chr3L 5250081 intron shep - chr3L 5250134 intron shep - chr3L 5250187 intron shep - chr3L_5_5250001 chr3L_5250001 RAL-26 688 chr3L 5310368 5310386 chr3L 5310495 5310513 5 126 2.5 8.0 5.2 0.8 145 chr3L 5310368 intergenic not near genes chr3L 5310440 intergenic not near genes chr3L 5310513 intergenic not near genes chr3L_5_5310001 chr3L_5310001 RAL-26 689 chr3L 5316950 5316968 chr3L 5317035 5317053 8 85 5.0 6.0 5.5 1.2 103 chr3L 5316950 intergenic CR45741 - chr3L 5317002 intergenic not near genes chr3L 5317053 intergenic not near genes chr3L_8_5315001 chr3L_5315001 RAL-26 690 chr3L 5388204 5388232 chr3L 5388528 5388556 7 323 2.5 3.5 3.0 1.8 352 chr3L 5388204 intergenic not near genes chr3L 5388380 intergenic not near genes chr3L 5388556 intergenic not near genes chr3L_7_5385001 chr3L_5385001 RAL-26 691 chr3L 5522108 5522129 chr3L 5522694 5522715 10 586 2.5 1.5 2.0 3.3 607 chr3L 5522108 intron Lkr - chr3L 5522412 intron Lkr - chr3L 5522715 intron Lkr - chr3L_10_5520001 chr3L_5520001 RAL-26 692 chr3L 5667629 5667635 chr3L 5667709 5667715 5 80 4.0 0.0 2.0 1.7 86 chr3L 5667629 intron sif + chr3L 5667672 intron sif + chr3L 5667715 intron sif + chr3L_5_5665001 chr3L_5665001 RAL-26 693 chr3L 5701566 5701595 chr3L 5701647 5701676 9 81 1.5 3.5 2.5 2.6 110 chr3L 5701566 intron sif + chr3L 5701621 intron sif + chr3L 5701676 intron sif + chr3L_9_5700001 chr3L_5700001 RAL-26 694 chr3L 5926316 5926346 chr3L 5926506 5926536 BS 10 190 0.0 5.0 2.5 2.9 220 chr3L 5926316 intron Vap-33B + chr3L 5926426 intron Vap-33B + chr3L 5926536 intron Vap-33B + chr3L_10_5925001 chr3L_5925001 RAL-26 695 chr3L 6028374 6028403 chr3L 6028472 6028478 4 92 1.0 4.0 2.5 1.1 104 chr3L 6028374 intergenic not near genes chr3L 6028426 intergenic not near genes chr3L 6028478 intergenic not near genes chr3L_4_6025001 chr3L_6025001 RAL-26 696 chr3L 6052647 6052669 chr3L 6052732 6052754 8 85 6.0 4.5 5.2 1.3 107 chr3L 6052647 exon Jon65Aii + chr3L 6052700 intron Jon65Aii + chr3L 6052754 exon Jon65Aii + chr3L_8_6050001 chr3L_6050001 RAL-26 697 chr3L 6220912 6220938 chr3L 6230064 6230089 roo 9 9152 2.5 4.0 3.2 2.1 9177 chr3L 6220912 5` UTR pncr008:3L + chr3L 6225500 intergenic not near genes chr3L 6230089 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RAL-26 698 chr3L 6284950 6284983 chr3L 6285044 6285077 6 94 0.5 2.0 1.2 2.7 127 chr3L 6284950 intergenic not near genes chr3L 6285014 intergenic not near genes chr3L 6285077 intergenic not near genes chr3L_6_6285001 chr3L_6285001 RAL-26 699 chr3L 6442229 6442259 chr3L 6442316 6442346 7 87 1.0 2.0 1.5 2.8 117 chr3L 6442229 intron CG42747 + chr3L 6442288 intron CG42747 + chr3L 6442346 intron CG42747 + chr3L_7_6440001 chr3L_6440001 RAL-26 700 chr3L 6465886 6465905 chr3L 6465971 6465990 5 85 5.0 0.5 2.8 1.3 104 chr3L 6465886 intron CG42747 + chr3L 6465938 intron CG42747 + chr3L 6465990 intron CG42747 + chr3L_5_6465001 chr3L_6465001 RAL-26 701 chr3L 6524500 6524527 chr3L 6524590 6524617 10 90 2.5 1.5 2.0 3.3 117 chr3L 6524500 intron sfl + chr3L 6524558 intron sfl + chr3L 6524617 intron sfl + chr3L_10_6520001 chr3L_6520001 RAL-26 702 chr3L 6657441 6657476 chr3L 6657593 6657628 14 152 4.0 3.0 3.5 3.1 187 chr3L 6657441 intergenic not near genes chr3L 6657534 intergenic not near genes chr3L 6657628 intergenic not near genes chr3L_14_6655001 chr3L_6655001 RAL-26 703 chr3L 6855934 6855950 chr3L 6860718 6860734 Doc 8 4784 2.5 4.0 3.2 1.9 4800 chr3L 6855934 intergenic not near genes chr3L 6858334 intergenic not near genes chr3L 6860734 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-26 704 chr3L 6958974 6958986 chr3L 6963553 6963565 5 4580 24.0 27.5 25.8 0.2 4591 chr3L 6958974 exon Surf1 + chr3L 6961270 exon sgl - chr3L 6963565 intron sgl - chr3L_5_6960001 chr3L_6960001 RAL-26 705 chr3L 6963569 6963577 chr3L 6963654 6963662 5 85 12.0 3.0 7.5 0.6 93 chr3L 6963569 intron sgl - chr3L 6963616 intron sgl - chr3L 6963662 intron sgl - chr3L_5_6960001 chr3L_6960001 RAL-26 706 chr3L 6963588 6963600 chr3L 6963673 6963685 6 85 3.5 4.0 3.8 1.2 97 chr3L 6963588 intron sgl - chr3L 6963636 intron sgl - chr3L 6963685 intron sgl - chr3L_6_6960001 chr3L_6960001 RAL-26 707 chr3L 6968379 6968401 chr3L 6968456 6968478 9 77 4.5 6.0 5.2 1.5 99 chr3L 6968379 exon Mis12 - chr3L 6968428 intron Mis12 - chr3L 6968478 intron Mis12 - chr3L_9_6965001 chr3L_6965001 RAL-26 708 chr3L 6982878 6982896 chr3L 6982960 6982978 4 82 1.0 2.5 1.8 1.4 100 chr3L 6982878 intergenic not near genes chr3L 6982928 intergenic not near genes chr3L 6982978 intergenic CG32388 -,CG43439 - chr3L_4_6980001 chr3L_6980001 RAL-26 709 chr3L 7151398 7151421 chr3L 7151506 7151529 10 108 3.5 1.0 2.2 3.1 131 chr3L 7151398 intron corn - chr3L 7151464 intron corn - chr3L 7151529 intron corn - chr3L_10_7150001 chr3L_7150001 RAL-26 710 chr3L 7175041 7175061 chr3L 7175271 7175290 10 230 2.0 4.5 3.2 2.4 249 chr3L 7175041 intron Dscam2 - chr3L 7175166 intron Dscam2 - chr3L 7175290 intron Dscam2 - chr3L_10_7175001 chr3L_7175001 RAL-26 711 chr3L 7209012 7209038 chr3L 7209088 7209114 4 76 0.5 1.5 1.0 2.0 102 chr3L 7209012 intergenic not near genes chr3L 7209063 intergenic not near genes chr3L 7209114 intergenic not near genes chr3L_4_7205001 chr3L_7205001 RAL-26 712 chr3L 7256518 7256538 chr3L 7260840 7260860 5 4322 16.5 18.0 17.2 0.3 4342 chr3L 7256518 intron CG14830 - chr3L 7258689 intron CG14830 - chr3L 7260860 intron CG14830 - chr3L_5_7255001 chr3L_7255001 RAL-26 713 chr3L 7276156 7276188 chr3L 7276238 7276270 5 82 1.5 3.5 2.5 1.4 114 chr3L 7276156 intron unc-13-4A - chr3L 7276213 intron unc-13-4A - chr3L 7276270 intron unc-13-4A - chr3L_5_7275001 chr3L_7275001 RAL-26 714 chr3L 7277106 7277129 chr3L 7277208 7277230 4 102 3.5 1.0 2.2 1.2 124 chr3L 7277106 exon unc-13-4A - chr3L 7277168 intron unc-13-4A - chr3L 7277230 intron unc-13-4A - chr3L_4_7275001 chr3L_7275001 RAL-26 715 chr3L 7393130 7393160 chr3L 7393301 7393334 6 173 0.0 1.5 0.8 3.3 204 chr3L 7393130 intron CG8563 + chr3L 7393232 intron CG8563 + chr3L 7393334 intron CG8563 + chr3L_6_7390001 chr3L_7390001 RAL-26 716 chr3L 7498759 7498781 chr3L 7503536 7503558 F-element 4 4777 3.0 1.0 2.0 1.3 4799 chr3L 7498759 5` UTR CG8539 - chr3L 7501158 intergenic not near genes chr3L 7503558 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-26 717 chr3L 7568964 7568977 chr3L 7569043 7569056 5 77 1.0 1.5 1.2 2.3 92 chr3L 7568964 exon frac + chr3L 7569010 intron frac + chr3L 7569056 intron frac + chr3L_5_7565001 chr3L_7565001 RAL-26 718 chr3L 7575281 7575303 chr3L 7575367 7575389 8 86 4.0 2.5 3.2 1.9 108 chr3L 7575281 intergenic not near genes chr3L 7575335 intergenic not near genes chr3L 7575389 intergenic not near genes chr3L_8_7575001 chr3L_7575001 RAL-26 719 chr3L 7576212 7576225 chr3L 7576300 7576312 4 88 3.0 2.5 2.8 1.1 100 chr3L 7576212 intergenic not near genes chr3L 7576262 intergenic not near genes chr3L 7576312 intergenic not near genes chr3L_4_7575001 chr3L_7575001 RAL-26 720 chr3L 7691838 7691852 chr3L 7691930 7691944 4 92 4.5 0.5 2.5 1.1 106 chr3L 7691838 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691891 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691944 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_4_7690001 chr3L_7690001 RAL-26 721 chr3L 7752145 7752177 chr3L 7752252 7752284 11 105 6.0 2.5 4.2 2.1 139 chr3L 7752145 intron CG32373 + chr3L 7752214 intron CG32373 + chr3L 7752284 intron CG32373 + chr3L_11_7750001 chr3L_7750001 RAL-26 722 chr3L 7793712 7793731 chr3L 7800764 7800783 297 5 7052 3.0 1.5 2.2 1.6 7071 chr3L 7793712 intron CG32369 - chr3L 7797248 intron CG32369 - chr3L 7800783 intron CG32369 - chr3L_5_7795001 chr3L_7795001 RAL-26 723 chr3L 7886518 7886544 chr3L 7889036 7889059 Stalker4 13 2518 0.0 3.5 1.8 4.6 2541 chr3L 7886518 intron CG32365 + chr3L 7887788 intron CG32365 + chr3L 7889059 intron CG32365 + chr3L_13_7885001 chr3L_7885001 RAL-26 724 chr3L 7971850 7971880 chr3L 7971930 7971960 7 77 1.0 3.0 2.0 2.3 110 chr3L 7971850 3` UTR RNaseX25 + chr3L 7971905 3` UTR RNaseX25 + chr3L 7971960 3` UTR RNaseX25 + chr3L_7_7970001 chr3L_7970001 RAL-26 725 chr3L 7985373 7985392 chr3L 7987701 7987720 NOF 4 2328 2.5 2.0 2.2 1.2 2347 chr3L 7985373 intron nmo + chr3L 7986546 intron nmo + chr3L 7987720 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-26 726 chr3L 8295794 8295824 chr3L 8295952 8295982 4 158 1.5 2.5 2.0 1.3 188 chr3L 8295794 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8295982 intergenic not near genes chr3L_4_8295001 chr3L_8295001 RAL-26 727 chr3L 8690598 8690632 chr3L 8690845 8690879 13 247 3.0 3.5 3.2 3.1 281 chr3L 8690598 intergenic not near genes chr3L 8690738 intergenic not near genes chr3L 8690879 intergenic not near genes chr3L_13_8690001 chr3L_8690001 RAL-26 728 chr3L 8791278 8791288 chr3L 8796698 8796708 I-element 4 5420 4.0 0.0 2.0 1.3 5430 chr3L 8791278 exon Fhos + chr3L 8793993 intron Fhos + chr3L 8796708 intron Fhos + chr3L_4_8790001 chr3L_8790001 RAL-26 729 chr3L 8849208 8849233 chr3L 8849288 8849313 10 80 2.5 1.0 1.8 3.6 105 chr3L 8849208 intron dally + chr3L 8849260 intron dally + chr3L 8849313 intron dally + chr3L_10_8845001 chr3L_8845001 RAL-26 730 chr3L 8859324 8859338 chr3L 8859412 8859418 10 87 5.5 6.5 6.0 1.4 94 chr3L 8859324 intron dally + chr3L 8859371 intron dally + chr3L 8859418 intron dally + chr3L_10_8855001 chr3L_8855001 RAL-26 731 chr3L 8949412 8949510 chr3L 8949507 8949591 7 83 0.0 0.0 0.0 7.0 179 chr3L 8949412 intron,intron CG43783 -,orb2 - chr3L 8949502 intron,intron CG43783 -,orb2 - chr3L 8949591 intron,intron CG43783 -,orb2 - chr3L_7_8945001 chr3L_8945001 RAL-26 732 chr3L 9003951 9003976 chr3L 9004031 9004061 7 84 1.0 1.0 1.0 3.5 110 chr3L 9003951 intergenic not near genes chr3L 9004006 intergenic not near genes chr3L 9004061 intergenic not near genes chr3L_7_9000001 chr3L_9000001 RAL-26 733 chr3L 9012232 9012256 chr3L 9012375 9012399 10 143 3.0 5.0 4.0 2.0 167 chr3L 9012232 intergenic Doc2 - chr3L 9012316 intergenic Doc2 - chr3L 9012399 intergenic Doc2 - chr3L_10_9010001 chr3L_9010001 RAL-26 734 chr3L 9076938 9076958 chr3L 9084498 9084518 412 5 7560 1.5 2.5 2.0 1.7 7580 chr3L 9076938 exon Tequila + chr3L 9080728 intron Tequila + chr3L 9084518 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-26 735 chr3L 9115242 9115275 chr3L 9115325 9115358 11 83 1.5 1.5 1.5 4.4 116 chr3L 9115242 intron bol - chr3L 9115300 intron bol - chr3L 9115358 intron bol - chr3L_11_9115001 chr3L_9115001 RAL-26 736 chr3L 9130564 9130580 chr3L 9134324 9134341 412 5 3761 3.5 3.5 3.5 1.1 3777 chr3L 9130564 intergenic bol - chr3L 9132452 intergenic not near genes chr3L 9134341 intergenic Dhpr + chr3L_5_9130001 chr3L_9130001 RAL-26 737 chr3L 9219241 9219272 chr3L 9219913 9219944 jockey 6 670 4.5 4.5 4.5 1.1 703 chr3L 9219241 intergenic not near genes chr3L 9219592 intergenic not near genes chr3L 9219944 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-26 738 chr3L 9237980 9238007 chr3L 9238060 9238072 10 78 3.5 2.5 3.0 2.5 92 chr3L 9237980 intergenic not near genes chr3L 9238026 intergenic not near genes chr3L 9238072 intergenic not near genes chr3L_10_9235001 chr3L_9235001 RAL-26 739 chr3L 9270619 9270649 chr3L 9278374 9278404 roo 8 7754 5.0 3.0 4.0 1.6 7785 chr3L 9270619 intron GluRIB + chr3L 9274512 intron GluRIB + chr3L 9278404 exon GluRIB + chr3L_8_9270001 chr3L_9270001 RAL-26 740 chr3L 9295285 9295317 chr3L 9295365 9295397 5 80 3.0 2.0 2.5 1.4 112 chr3L 9295285 intergenic not near genes chr3L 9295341 intergenic not near genes chr3L 9295397 intergenic not near genes chr3L_5_9295001 chr3L_9295001 RAL-26 741 chr3L 9510911 9510956 chr3L 9511004 9511035 5 84 0.0 3.0 1.5 2.0 124 chr3L 9510911 intron RpS9 - chr3L 9510973 intron RpS9 - chr3L 9511035 intron RpS9 - chr3L_5_9510001 chr3L_9510001 RAL-26 742 chr3L 9557913 9557943 chr3L 9558238 9558268 11 325 0.5 2.0 1.2 5.0 355 chr3L 9557913 intron CG42673 + chr3L 9558090 intron CG42673 + chr3L 9558268 intron CG42673 + chr3L_11_9555001 chr3L_9555001 RAL-26 743 chr3L 9575908 9575938 chr3L 9580986 9581016 jockey 10 5078 3.0 1.0 2.0 3.3 5108 chr3L 9575908 intron CG42673 + chr3L 9578462 intron CG42673 + chr3L 9581016 intron CG42673 + chr3L_10_9575001 chr3L_9575001 RAL-26 744 chr3L 9635577 9635603 chr3L 9635654 9635680 4 77 1.5 0.5 1.0 2.0 103 chr3L 9635577 intron fry - chr3L 9635628 intron fry - chr3L 9635680 exon fry - chr3L_4_9635001 chr3L_9635001 RAL-26 745 chr3L 9809728 9809744 chr3L 9809805 9809806 6 74 5.5 4.5 5.0 1.0 78 chr3L 9809728 intergenic not near genes chr3L 9809767 intergenic not near genes chr3L 9809806 intergenic not near genes chr3L_6_9805001 chr3L_9805001 RAL-26 746 chr3L 9918879 9918913 chr3L 9918974 9919008 8 95 1.0 1.0 1.0 4.0 129 chr3L 9918879 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919008 intron CG34356 + chr3L_8_9915001 chr3L_9915001 RAL-26 747 chr3L 10003151 10003161 chr3L 10003248 10003258 6 97 1.0 5.0 3.0 1.5 107 chr3L 10003151 intron dpr6 + chr3L 10003204 intron dpr6 + chr3L 10003258 intron dpr6 + chr3L_6_10000001 chr3L_10000001 RAL-26 748 chr3L 10148401 10148434 chr3L 10148487 10148520 7 86 3.0 1.0 2.0 2.3 119 chr3L 10148401 3` UTR dpr10 - chr3L 10148460 3` UTR dpr10 - chr3L 10148520 3` UTR dpr10 - chr3L_7_10145001 chr3L_10145001 RAL-26 749 chr3L 10293947 10293954 chr3L 10294024 10294029 4 76 0.0 0.5 0.2 3.3 82 chr3L 10293947 intergenic not near genes chr3L 10293988 intergenic not near genes chr3L 10294029 intergenic not near genes chr3L_4_10290001 chr3L_10290001 RAL-26 750 chr3L 10308738 10308772 chr3L 10308815 10308849 7 77 1.5 2.0 1.8 2.5 111 chr3L 10308738 intergenic not near genes chr3L 10308794 intergenic not near genes chr3L 10308849 intergenic not near genes chr3L_7_10305001 chr3L_10305001 RAL-26 751 chr3L 10526642 10526653 chr3L 10526723 10526734 5 81 4.5 5.0 4.8 0.9 92 chr3L 10526642 intron A2bp1 + chr3L 10526688 intron A2bp1 + chr3L 10526734 intron A2bp1 + chr3L_5_10525001 chr3L_10525001 RAL-26 752 chr3L 10538692 10538708 chr3L 10538770 10538787 4 79 0.5 0.0 0.2 3.3 95 chr3L 10538692 intron A2bp1 + chr3L 10538740 intron A2bp1 + chr3L 10538787 intron A2bp1 + chr3L_4_10535001 chr3L_10535001 RAL-26 753 chr3L 10658081 10658207 chr3L 10658158 10658334 9 110 0.0 0.0 0.0 9.0 253 chr3L 10658081 intron CG32066 - chr3L 10658208 intron CG32066 - chr3L 10658334 intron CG32066 - chr3L_9_10655001 chr3L_10655001 RAL-26 754 chr3L 10762830 10762852 chr3L 10762914 10762924 7 80 4.5 4.0 4.2 1.3 94 chr3L 10762830 intergenic not near genes chr3L 10762877 intergenic not near genes chr3L 10762924 intergenic not near genes chr3L_7_10760001 chr3L_10760001 RAL-26 755 chr3L 10828345 10828361 chr3L 10828411 10828429 4 68 3.5 2.0 2.8 1.1 84 chr3L 10828345 intergenic not near genes chr3L 10828387 intergenic not near genes chr3L 10828429 intergenic not near genes chr3L_4_10825001 chr3L_10825001 RAL-26 756 chr3L 10868802 10868821 chr3L 10868884 10868903 4 82 0.0 3.0 1.5 1.6 101 chr3L 10868802 intron tna + chr3L 10868852 intron tna + chr3L 10868903 intron tna + chr3L_4_10865001 chr3L_10865001 RAL-26 757 chr3L 10904302 10904330 chr3L 10904395 10904423 9 93 2.5 1.5 2.0 3.0 121 chr3L 10904302 intergenic not near genes chr3L 10904362 intergenic not near genes chr3L 10904423 intergenic not near genes chr3L_9_10900001 chr3L_10900001 RAL-26 758 chr3L 10956455 10956468 chr3L 10956573 10956586 4 118 1.0 6.5 3.8 0.8 131 chr3L 10956455 intergenic not near genes chr3L 10956520 intergenic not near genes chr3L 10956586 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-26 759 chr3L 11087068 11087082 chr3L 11088851 11088871 S-element 5 1788 0.0 2.5 1.2 2.3 1803 chr3L 11087068 intron JIL-1 - chr3L 11087970 intron JIL-1 - chr3L 11088871 intron JIL-1 - chr3L_5_11085001 chr3L_11085001 RAL-26 760 chr3L 11090063 11090091 chr3L 11090151 11090179 4 88 1.0 0.0 0.5 2.7 116 chr3L 11090063 intron JIL-1 - chr3L 11090121 intron JIL-1 - chr3L 11090179 intron JIL-1 - chr3L_4_11090001 chr3L_11090001 RAL-26 761 chr3L 11105294 11105327 chr3L 11107005 11107038 X-element 7 1709 3.0 3.0 3.0 1.8 1744 chr3L 11105294 intergenic not near genes chr3L 11106166 intergenic not near genes chr3L 11107038 exon CG32073 - chr3L_7_11105001 chr3L_11105001 RAL-26 762 chr3L 11135531 11135801 chr3L 11135761 11135886 6 109 0.0 0.0 0.0 6.0 355 chr3L 11135531 intergenic CG14143 + chr3L 11135708 intergenic CG14143 +,CG32082 + chr3L 11135886 intergenic CG32082 +,CG14143 + chr3L_6_11135001 chr3L_11135001 RAL-26 763 chr3L 11151748 11151773 chr3L 11151826 11151849 4 78 0.0 0.5 0.2 3.3 101 chr3L 11151748 intron CG32082 + chr3L 11151798 intron CG32082 + chr3L 11151849 intron CG32082 + chr3L_4_11150001 chr3L_11150001 RAL-26 764 chr3L 11329691 11329726 chr3L 11332896 11332931 jockey 5 3205 2.5 4.5 3.5 1.1 3240 chr3L 11329691 intergenic not near genes chr3L 11331311 intergenic not near genes chr3L 11332931 intergenic not near genes chr3L_5_11330001 chr3L_11330001 RAL-26 765 chr3L 11383961 11383995 chr3L 11384040 11384056 15 77 1.5 1.5 1.5 6.0 95 chr3L 11383961 intron CR42755 - chr3L 11384008 3` UTR CR42755 - chr3L 11384056 3` UTR CR42755 - chr3L_15_11380001 chr3L_11380001 RAL-26 766 chr3L 11397563 11397589 chr3L 11397672 11397688 13 107 2.5 2.5 2.5 3.7 125 chr3L 11397563 exon CG44362 + chr3L 11397626 exon CG44362 + chr3L 11397688 exon CG44362 + chr3L_13_11395001 chr3L_11395001 RAL-26 767 chr3L 11435564 11435589 chr3L 11435733 11435758 8 169 1.5 4.0 2.8 2.1 194 chr3L 11435564 intergenic CR44548 +,CG6149 - chr3L 11435661 5` UTR CR44548 + chr3L 11435758 5` UTR CR44548 + chr3L_8_11435001 chr3L_11435001 RAL-26 768 chr3L 11579565 11579585 chr3L 11579663 11579691 6 104 2.0 0.5 1.2 2.7 126 chr3L 11579565 intergenic CG43390 - chr3L 11579628 intergenic CG43390 - chr3L 11579691 intergenic CG43390 - chr3L_6_11575001 chr3L_11575001 RAL-26 769 chr3L 11684678 11684685 chr3L 11684815 11684822 5 137 3.5 10.5 7.0 0.6 144 chr3L 11684678 intron Sug + chr3L 11684750 intron Sug + chr3L 11684822 intron Sug + chr3L_5_11680001 chr3L_11680001 RAL-26 770 chr3L 11729683 11729705 chr3L 11729759 11729781 5 76 1.0 3.5 2.2 1.6 98 chr3L 11729683 exon CG32088 + chr3L 11729732 intron CG32088 + chr3L 11729781 exon CG32088 + chr3L_5_11725001 chr3L_11725001 RAL-26 771 chr3L 11744011 11744040 chr3L 11744119 11744148 4 108 2.0 0.0 1.0 2.0 137 chr3L 11744011 exon CG6024 - chr3L 11744080 intron CG6024 - chr3L 11744148 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-26 772 chr3L 802565 802566 chr3L 11777678 11777678 5 10975112 10.0 7.5 8.8 0.5 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_6290001 chr3L_6290001 RAL-26 773 chr3L 11811456 11811485 chr3L 11811534 11811563 6 78 2.5 3.0 2.8 1.6 107 chr3L 11811456 intron CG42255 - chr3L 11811510 intron CG42255 - chr3L 11811563 exon CG42255 - chr3L_6_11810001 chr3L_11810001 RAL-26 774 chr3L 11858996 11859001 chr3L 11859073 11859078 5 77 6.0 4.0 5.0 0.8 82 chr3L 11858996 intron CG44837 - chr3L 11859037 intron CG44837 - chr3L 11859078 intron CG44837 - chr3L_5_11855001 chr3L_11855001 RAL-26 775 chr3L 11864561 11864575 chr3L 11865856 11865862 pogo 4 1293 3.0 1.0 2.0 1.3 1301 chr3L 11864561 intron CG44837 - chr3L 11865212 intron CG44837 - chr3L 11865862 intron CG44837 - chr3L_4_11865001 chr3L_11865001 RAL-26 776 chr3L 12019327 12019350 chr3L 12019440 12019463 4 113 0.0 4.0 2.0 1.3 136 chr3L 12019327 intron rols - chr3L 12019395 intron rols - chr3L 12019463 intron rols - chr3L_4_12015001 chr3L_12015001 RAL-26 777 chr3L 12052708 12052737 chr3L 12052797 12052810 6 86 0.5 1.0 0.8 3.3 102 chr3L 12052708 intron rols - chr3L 12052759 intron rols - chr3L 12052810 intron rols - chr3L_6_12050001 chr3L_12050001 RAL-26 778 chr3L 12106291 12106296 chr3L 12106380 12106385 4 89 0.0 1.5 0.8 2.2 94 chr3L 12106291 intergenic not near genes chr3L 12106338 intergenic not near genes chr3L 12106385 intergenic not near genes chr3L_4_12105001 chr3L_12105001 RAL-26 779 chr3L 12255209 12255222 chr3L 12255294 12255307 6 85 2.5 4.5 3.5 1.3 98 chr3L 12255209 intron app - chr3L 12255258 intron app - chr3L 12255307 intron app - chr3L_6_12255001 chr3L_12255001 RAL-26 780 chr3L 12304094 12304113 chr3L 12304169 12304189 5 76 4.5 7.0 5.8 0.7 95 chr3L 12304094 intergenic not near genes chr3L 12304142 intergenic not near genes chr3L 12304189 intergenic not near genes chr3L_5_12300001 chr3L_12300001 RAL-26 781 chr3L 12369547 12369567 chr3L 12369637 12369657 5 89 0.5 2.0 1.2 2.3 110 chr3L 12369547 intron Ncc69 - chr3L 12369602 intron Ncc69 - chr3L 12369657 intron Ncc69 - chr3L_5_12365001 chr3L_12365001 RAL-26 782 chr3L 12446269 12446297 chr3L 12446347 12446359 10 72 3.5 2.0 2.8 2.6 90 chr3L 12446269 intergenic not near genes chr3L 12446314 intergenic not near genes chr3L 12446359 intergenic not near genes chr3L_10_12445001 chr3L_12445001 RAL-26 783 chr3L 12591632 12591642 chr3L 12591709 12591718 4 76 6.5 5.5 6.0 0.6 86 chr3L 12591632 intron ara + chr3L 12591675 intron ara + chr3L 12591718 intron ara + chr3L_4_12590001 chr3L_12590001 RAL-26 784 chr3L 12647953 12647974 chr3L 12648029 12648050 5 76 2.0 2.5 2.2 1.6 97 chr3L 12647953 5` UTR CR32111 + chr3L 12648002 5` UTR CR32111 + chr3L 12648050 5` UTR CR32111 + chr3L_5_12645001 chr3L_12645001 RAL-26 785 chr3L 12793681 12793693 chr3L 12797336 12797348 4 3655 17.0 8.5 12.8 0.3 3667 chr3L 12793681 intron,intron Atg1 -,CG42709 + chr3L 12795514 intron,exon Atg1 -,CG42709 + chr3L 12797348 intron Atg1 - chr3L_4_12795001 chr3L_12795001 RAL-26 786 chr3L 12801983 12802011 chr3L 12802059 12802086 4 76 1.5 0.5 1.0 2.0 103 chr3L 12801983 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802086 intron Atg1 - chr3L_4_12800001 chr3L_12800001 RAL-26 787 chr3L 12874930 12874961 chr3L 12877222 12877236 jockey 6 2289 3.5 2.5 3.0 1.5 2306 chr3L 12874930 intergenic not near genes chr3L 12876083 intergenic not near genes chr3L 12877236 intergenic not near genes chr3L_6_12875001 chr3L_12875001 RAL-26 788 chr3L 12919278 12919295 chr3L 12924762 12924767 Rt1c 6 5481 4.0 1.5 2.8 1.6 5489 chr3L 12919278 intergenic not near genes chr3L 12922022 intergenic not near genes chr3L 12924767 intergenic not near genes chr3L_6_12920001 chr3L_12920001 RAL-26 789 chr3L 12957784 12957818 chr3L 12962266 12962300 copia 5 4482 0.0 1.0 0.5 3.3 4516 chr3L 12957784 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962300 intergenic not near genes chr3L_5_12960001 chr3L_12960001 RAL-26 790 chr3L 12962676 12962697 chr3L 12962792 12962813 16 115 4.5 4.5 4.5 2.9 137 chr3L 12962676 intergenic not near genes chr3L 12962744 intergenic not near genes chr3L 12962813 intergenic not near genes chr3L_16_12960001 chr3L_12960001 RAL-26 791 chr3L 13090906 13090913 chr3L 13091017 13091024 4 110 2.0 8.0 5.0 0.7 118 chr3L 13090906 intergenic not near genes chr3L 13090965 intergenic not near genes chr3L 13091024 intergenic not near genes chr3L_4_13090001 chr3L_13090001 RAL-26 792 chr3L 13168112 13168133 chr3L 13168194 13168223 6 83 1.5 0.0 0.8 3.3 111 chr3L 13168112 intergenic not near genes chr3L 13168168 intergenic not near genes chr3L 13168223 intergenic not near genes chr3L_6_13165001 chr3L_13165001 RAL-26 793 chr3L 13206236 13206252 chr3L 13206318 13206334 8 82 7.0 1.0 4.0 1.6 98 chr3L 13206236 intergenic not near genes chr3L 13206285 intergenic not near genes chr3L 13206334 intergenic not near genes chr3L_8_13205001 chr3L_13205001 RAL-26 794 chr3L 13215221 13215236 chr3L 13215320 13215335 5 99 1.0 1.5 1.2 2.3 114 chr3L 13215221 intergenic CR45097 - chr3L 13215278 3` UTR CR45097 - chr3L 13215335 3` UTR CR45097 - chr3L_5_13215001 chr3L_13215001 RAL-26 795 chr3L 13329975 13330009 chr3L 13330066 13330100 7 88 2.5 0.5 1.5 2.8 125 chr3L 13329975 intergenic CG14113 + chr3L 13330038 intergenic CG14113 + chr3L 13330100 intergenic CG14113 + chr3L_7_13330001 chr3L_13330001 RAL-26 796 chr3L 13361978 13361991 chr3L 13362071 13362085 5 94 1.5 3.0 2.2 1.6 107 chr3L 13361978 intergenic not near genes chr3L 13362032 intergenic not near genes chr3L 13362085 intergenic not near genes chr3L_5_13360001 chr3L_13360001 RAL-26 797 chr3L 13525164 13525188 chr3L 13532960 13532984 roo 8 7796 3.0 1.5 2.2 2.5 7820 chr3L 13525164 intergenic not near genes chr3L 13529074 intergenic not near genes chr3L 13532984 intergenic not near genes chr3L_8_13525001 chr3L_13525001 RAL-26 798 chr3L 13629529 13629548 chr3L 13629638 13629657 5 109 3.0 4.0 3.5 1.1 128 chr3L 13629529 intron bru-3 - chr3L 13629593 intron bru-3 - chr3L 13629657 intron bru-3 - chr3L_5_13625001 chr3L_13625001 RAL-26 799 chr3L 13646648 13646678 chr3L 13646735 13646765 11 87 3.5 2.5 3.0 2.8 117 chr3L 13646648 intron bru-3 - chr3L 13646706 intron bru-3 - chr3L 13646765 intron bru-3 - chr3L_11_13645001 chr3L_13645001 RAL-26 800 chr3L 13703654 13703659 chr3L 13703731 13703736 4 77 2.0 1.0 1.5 1.6 82 chr3L 13703654 intron bru-3 - chr3L 13703695 intron bru-3 - chr3L 13703736 intron bru-3 - chr3L_4_13700001 chr3L_13700001 RAL-26 801 chr3L 13752774 13752808 chr3L 13752871 13752905 8 95 0.5 2.0 1.2 3.6 131 chr3L 13752774 intron bru-3 - chr3L 13752840 intron bru-3 - chr3L 13752905 intron bru-3 - chr3L_8_13750001 chr3L_13750001 RAL-26 802 chr3L 14076086 14076107 chr3L 14076165 14076186 4 79 0.0 1.0 0.5 2.7 100 chr3L 14076086 3` UTR,intron Pex1 +,btl + chr3L 14076136 intron btl + chr3L 14076186 intron btl + chr3L_4_14075001 chr3L_14075001 RAL-26 803 chr3L 14169004 14169039 chr3L 14169163 14169198 8 159 2.5 2.5 2.5 2.3 194 chr3L 14169004 intergenic not near genes chr3L 14169101 intergenic not near genes chr3L 14169198 intergenic not near genes chr3L_8_14165001 chr3L_14165001 RAL-26 804 chr3L 14282588 14282605 chr3L 14282668 14282685 5 80 3.0 6.0 4.5 0.9 97 chr3L 14282588 intron fz + chr3L 14282636 intron fz + chr3L 14282685 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-26 805 chr3L 14295984 14296006 chr3L 14296470 14296487 roo 10 485 4.0 2.5 3.2 2.4 503 chr3L 14295984 intron fz + chr3L 14296236 intron fz + chr3L 14296487 intron fz + chr3L_10_14295001 chr3L_14295001 RAL-26 806 chr3L 14312020 14312058 chr3L 14316834 14316872 X-element 7 4814 2.5 1.5 2.0 2.3 4852 chr3L 14312020 exon fz + chr3L 14314446 intron fz + chr3L 14316872 intron fz + chr3L_7_14310001 chr3L_14310001 RAL-26 807 chr3L 14325381 14325394 chr3L 14325475 14325488 4 94 4.0 0.0 2.0 1.3 107 chr3L 14325381 intron,intron fz +,CR45025 - chr3L 14325434 intron,intron fz +,CR45025 - chr3L 14325488 intron,intron fz +,CR45025 - chr3L_4_14325001 chr3L_14325001 RAL-26 808 chr3L 14331457 14331484 chr3L 14331540 14331567 5 82 1.0 1.5 1.2 2.3 110 chr3L 14331457 intron fz + chr3L 14331512 intron fz + chr3L 14331567 intron fz + chr3L_5_14330001 chr3L_14330001 RAL-26 809 chr3L 14441596 14441623 chr3L 14441745 14441772 6 149 1.0 1.5 1.2 2.7 176 chr3L 14441596 intron bbg - chr3L 14441684 intron bbg - chr3L 14441772 intron bbg - chr3L_6_14440001 chr3L_14440001 RAL-26 810 chr3L 14468446 14468477 chr3L 14473652 14473683 copia 8 5206 2.5 0.5 1.5 3.2 5237 chr3L 14468446 intron bbg - chr3L 14471064 intron bbg - chr3L 14473683 intron bbg - chr3L_8_14470001 chr3L_14470001 RAL-26 811 chr3L 14486024 14486039 chr3L 14486105 14486120 4 81 1.0 0.5 0.8 2.2 96 chr3L 14486024 intron bbg - chr3L 14486072 intron bbg - chr3L 14486120 intron bbg - chr3L_4_14485001 chr3L_14485001 RAL-26 812 chr3L 14546606 14546819 chr3L 14546687 14546900 10 81 0.0 1.5 0.8 5.6 294 chr3L 14546606 intron CG9238 - chr3L 14546753 intron CG9238 - chr3L 14546900 intron CG9238 - chr3L_10_14545001 chr3L_14545001 RAL-26 813 chr3L 14553711 14553742 chr3L 14553794 14553825 7 83 2.0 1.5 1.8 2.5 114 chr3L 14553711 intergenic not near genes chr3L 14553768 intergenic not near genes chr3L 14553825 intergenic not near genes chr3L_7_14550001 chr3L_14550001 RAL-26 814 chr3L 14590345 14590374 chr3L 14590432 14590440 5 83 1.5 0.5 1.0 2.5 95 chr3L 14590345 intron HGTX - chr3L 14590392 intron HGTX - chr3L 14590440 intron HGTX - chr3L_5_14590001 chr3L_14590001 RAL-26 815 chr3L 14665025 14665060 chr3L 14665150 14665154 8 121 2.0 3.0 2.5 2.3 129 chr3L 14665025 exon dlp + chr3L 14665090 intron dlp + chr3L 14665154 intron dlp + chr3L_8_14665001 chr3L_14665001 RAL-26 816 chr3L 14693540 14693574 chr3L 14693639 14693673 12 98 1.5 1.0 1.2 5.5 133 chr3L 14693540 intron ome + chr3L 14693606 intron ome + chr3L 14693673 intron ome + chr3L_12_14690001 chr3L_14690001 RAL-26 817 chr3L 14721189 14721209 chr3L 14723027 14723052 Rt1c 6 1842 5.5 3.0 4.2 1.2 1863 chr3L 14721189 intron ome + chr3L 14722120 intron ome + chr3L 14723052 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-26 818 chr3L 14725204 14725221 chr3L 14725509 14725526 5 305 3.5 0.5 2.0 1.7 322 chr3L 14725204 intron ome + chr3L 14725365 intron ome + chr3L 14725526 intron ome + chr3L_5_14725001 chr3L_14725001 RAL-26 819 chr3L 14891104 14891121 chr3L 14891187 14891204 4 83 3.0 5.5 4.2 0.8 100 chr3L 14891104 intergenic not near genes chr3L 14891154 intergenic not near genes chr3L 14891204 intergenic not near genes chr3L_4_14890001 chr3L_14890001 RAL-26 820 chr3L 14902368 14902390 chr3L 14902445 14902467 5 76 3.0 2.0 2.5 1.4 99 chr3L 14902368 intergenic not near genes chr3L 14902418 intergenic not near genes chr3L 14902467 intergenic not near genes chr3L_5_14900001 chr3L_14900001 RAL-26 821 chr3L 14912193 14912214 chr3L 14912275 14912296 5 82 0.5 4.0 2.2 1.6 103 chr3L 14912193 intron DCX-EMAP + chr3L 14912244 intron DCX-EMAP + chr3L 14912296 intron DCX-EMAP + chr3L_5_14910001 chr3L_14910001 RAL-26 822 chr3L 15085054 15085085 chr3L 15086220 15086251 1360 7 1166 2.0 1.5 1.8 2.5 1197 chr3L 15085054 intron cp309 - chr3L 15085652 intron cp309 - chr3L 15086251 intron cp309 - chr3L_7_15085001 chr3L_15085001 RAL-26 823 chr3L 15104134 15104140 chr3L 15104244 15104250 4 110 3.0 3.0 3.0 1.0 116 chr3L 15104134 intron CTPsyn + chr3L 15104192 intron CTPsyn + chr3L 15104250 intron CTPsyn + chr3L_4_15100001 chr3L_15100001 RAL-26 824 chr3L 15257433 15257451 chr3L 15257646 15257664 5 213 0.0 1.5 0.8 2.8 231 chr3L 15257433 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257664 intergenic not near genes chr3L_5_15255001 chr3L_15255001 RAL-26 825 chr3L 15273344 15273356 chr3L 15273490 15273502 4 146 0.0 1.0 0.5 2.7 158 chr3L 15273344 intergenic not near genes chr3L 15273423 intergenic not near genes chr3L 15273502 intergenic not near genes chr3L_4_15270001 chr3L_15270001 RAL-26 826 chr3L 15284567 15284595 chr3L 15284646 15284674 8 78 2.5 3.0 2.8 2.1 107 chr3L 15284567 intergenic not near genes chr3L 15284620 intergenic not near genes chr3L 15284674 intergenic not near genes chr3L_8_15280001 chr3L_15280001 RAL-26 827 chr3L 15327220 15327250 chr3L 15327296 15327326 7 76 2.0 1.0 1.5 2.8 106 chr3L 15327220 intergenic not near genes chr3L 15327273 intergenic not near genes chr3L 15327326 intergenic not near genes chr3L_7_15325001 chr3L_15325001 RAL-26 828 chr3L 15444652 15444679 chr3L 15444746 15444773 9 93 3.5 2.5 3.0 2.2 121 chr3L 15444652 intergenic not near genes chr3L 15444712 intergenic not near genes chr3L 15444773 intergenic not near genes chr3L_9_15440001 chr3L_15440001 RAL-26 829 chr3L 15466037 15466138 chr3L 15466119 15466234 6 91 0.0 0.0 0.0 6.0 197 chr3L 15466037 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466234 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-26 830 chr3L 15466528 15466550 chr3L 15466612 15466634 5 84 0.5 1.5 1.0 2.5 106 chr3L 15466528 intergenic not near genes chr3L 15466581 intergenic not near genes chr3L 15466634 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-26 831 chr3L 15472650 15472660 chr3L 15472727 15472737 6 77 9.0 8.0 8.5 0.6 87 chr3L 15472650 exon CG7804 - chr3L 15472694 exon CG7804 - chr3L 15472737 exon CG7804 - chr3L_6_15470001 chr3L_15470001 RAL-26 832 chr3L 15633081 15633215 chr3L 15633157 15633295 10 76 2.5 2.5 2.5 2.9 214 chr3L 15633081 intron comm3 - chr3L 15633188 intron comm3 - chr3L 15633295 intron comm3 - chr3L_10_15630001 chr3L_15630001 RAL-26 833 chr3L 15769409 15769444 chr3L 15769490 15769525 7 80 0.5 4.5 2.5 2.0 116 chr3L 15769409 intergenic not near genes chr3L 15769467 intergenic not near genes chr3L 15769525 intergenic not near genes chr3L_7_15765001 chr3L_15765001 RAL-26 834 chr3L 15883210 15883223 chr3L 15883487 15883516 5 288 0.0 1.0 0.5 3.3 306 chr3L 15883210 intron pHCl - chr3L 15883363 intron pHCl - chr3L 15883516 intron pHCl - chr3L_5_15880001 chr3L_15880001 RAL-26 835 chr3L 15899220 15899259 chr3L 15899787 15899796 jockey 7 559 2.5 2.5 2.5 2.0 576 chr3L 15899220 intergenic pHCl - chr3L 15899508 intergenic pHCl - chr3L 15899796 intergenic sff - chr3L_7_15895001 chr3L_15895001 RAL-26 836 chr3L 16070741 16070758 chr3L 16070818 16070835 4 77 1.0 2.5 1.8 1.4 94 chr3L 16070741 intron Mbs + chr3L 16070788 intron Mbs + chr3L 16070835 exon Mbs + chr3L_4_16070001 chr3L_16070001 RAL-26 837 chr3L 16184090 16184113 chr3L 16188934 16188957 X-element 6 4844 0.5 1.5 1.0 3.0 4867 chr3L 16184090 intergenic not near genes chr3L 16186524 intergenic not near genes chr3L 16188957 intergenic not near genes chr3L_6_16185001 chr3L_16185001 RAL-26 838 chr3L 16304864 16304893 chr3L 16304942 16304955 6 75 0.5 0.5 0.5 4.0 91 chr3L 16304864 intergenic CG43249 +,CG13043 - chr3L 16304910 intergenic CG43249 +,CG13043 - chr3L 16304955 intergenic CG13043 -,CG43249 + chr3L_6_16300001 chr3L_16300001 RAL-26 839 chr3L 16340264 16340289 chr3L 16340388 16340413 7 122 2.5 3.5 3.0 1.8 149 chr3L 16340264 intron CG4998 + chr3L 16340338 intron CG4998 + chr3L 16340413 intron CG4998 + chr3L_7_16340001 chr3L_16340001 RAL-26 840 chr3L 16437067 16437104 chr3L 16437146 16437190 6 85 1.0 0.0 0.5 4.0 123 chr3L 16437067 intron,intron CG33158 +,dsx-c73A - chr3L 16437128 intron,intron CG33158 +,dsx-c73A - chr3L 16437190 intron,intron CG33158 +,dsx-c73A - chr3L_6_16435001 chr3L_16435001 RAL-26 841 chr3L 16457534 16457542 chr3L 16457629 16457637 4 95 1.5 3.5 2.5 1.1 103 chr3L 16457534 intron CG33158 + chr3L 16457586 intron CG33158 + chr3L 16457637 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RAL-26 842 chr3L 16457907 16457927 chr3L 16457983 16458003 4 76 4.5 3.0 3.8 0.8 96 chr3L 16457907 intron CG33158 + chr3L 16457955 intron CG33158 + chr3L 16458003 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RAL-26 843 chr3L 16493976 16494010 chr3L 16494493 16494527 jockey 14 517 4.5 5.5 5.0 2.3 551 chr3L 16493976 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494252 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494527 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_14_16490001 chr3L_16490001 RAL-26 844 chr3L 16560301 16560337 chr3L 16560386 16560422 11 85 2.0 2.5 2.2 3.4 121 chr3L 16560301 intergenic not near genes chr3L 16560362 intergenic not near genes chr3L 16560422 intergenic not near genes chr3L_11_16560001 chr3L_16560001 RAL-26 845 chr3L 16561123 16561132 chr3L 16561189 16561204 7 74 3.5 3.0 3.2 1.7 81 chr3L 16561123 intergenic not near genes chr3L 16561164 intergenic not near genes chr3L 16561204 intergenic not near genes chr3L_7_16560001 chr3L_16560001 RAL-26 846 chr3L 16652689 16652705 chr3L 16652768 16652784 5 79 1.0 1.5 1.2 2.3 95 chr3L 16652689 intron Baldspot - chr3L 16652736 intron Baldspot - chr3L 16652784 intron Baldspot - chr3L_5_16650001 chr3L_16650001 RAL-26 847 chr3L 16861027 16861049 chr3L 16861129 16861151 8 102 5.5 3.0 4.2 1.5 124 chr3L 16861027 intron,exon Rh4 -,CG13029 + chr3L 16861089 intron,intron Rh4 -,CG13029 + chr3L 16861151 intron,intron Rh4 -,CG13029 + chr3L_8_16860001 chr3L_16860001 RAL-26 848 chr3L 16945729 16945757 chr3L 16954882 16954908 roo 15 9151 4.0 2.5 3.2 3.6 9179 chr3L 16945729 exon Obp73a + chr3L 16950318 intergenic not near genes chr3L 16954908 5` UTR Nc73EF + chr3L_15_16950001 chr3L_16950001 RAL-26 849 chr3L 17120652 17120945 chr3L 17120728 17121019 13 76 1.0 1.5 1.2 5.9 367 chr3L 17120652 intron Rbp6 - chr3L 17120836 intron Rbp6 - chr3L 17121019 intron Rbp6 - chr3L_13_17120001 chr3L_17120001 RAL-26 850 chr3L 17344631 17344653 chr3L 17344714 17344736 4 83 3.0 2.0 2.5 1.1 105 chr3L 17344631 exon brv2 - chr3L 17344684 5` UTR brv2 - chr3L 17344736 intergenic brv2 -,Mip - chr3L_4_17340001 chr3L_17340001 RAL-26 851 chr3L 17367434 17367447 chr3L 17367528 17367541 6 94 1.0 1.0 1.0 3.0 107 chr3L 17367434 intergenic CR45688 +,Cad74A - chr3L 17367488 intergenic CR45688 +,Cad74A - chr3L 17367541 intergenic CR45688 +,Cad74A - chr3L_6_17365001 chr3L_17365001 RAL-26 852 chr3L 17498101 17498112 chr3L 17498178 17498189 4 77 3.0 2.0 2.5 1.1 88 chr3L 17498101 intron Oatp74D + chr3L 17498145 intron Oatp74D + chr3L 17498189 intron Oatp74D + chr3L_4_17495001 chr3L_17495001 RAL-26 853 chr3L 17510750 17510763 chr3L 17510834 17510847 6 84 3.0 5.5 4.2 1.2 97 chr3L 17510750 exon Oatp74D + chr3L 17510798 intron Oatp74D + chr3L 17510847 intron Oatp74D + chr3L_6_17510001 chr3L_17510001 RAL-26 854 chr3L 17516978 17517006 chr3L 17524536 17524564 412 5 7558 2.0 1.5 1.8 1.8 7586 chr3L 17516978 intron CG7564 + chr3L 17520771 intron CG7564 + chr3L 17524564 3` UTR CG7564 + chr3L_5_17520001 chr3L_17520001 RAL-26 855 chr3L 17535816 17535839 chr3L 17535930 17535953 8 114 1.0 3.0 2.0 2.7 137 chr3L 17535816 intron Nedd4 + chr3L 17535884 intron Nedd4 + chr3L 17535953 intron Nedd4 + chr3L_8_17535001 chr3L_17535001 RAL-26 856 chr3L 17580589 17580603 chr3L 17580765 17580779 4 176 5.0 0.0 2.5 1.1 190 chr3L 17580589 intron Eip74EF - chr3L 17580684 intron Eip74EF - chr3L 17580779 intron Eip74EF - chr3L_4_17580001 chr3L_17580001 RAL-26 857 chr3L 17837626 17837649 chr3L 17837714 17837737 10 88 4.5 6.0 5.2 1.6 111 chr3L 17837626 exon Grd + chr3L 17837682 intron Grd + chr3L 17837737 intron Grd + chr3L_10_17835001 chr3L_17835001 RAL-26 858 chr3L 17968142 17968168 chr3L 17968223 17968249 9 81 1.5 1.5 1.5 3.6 107 chr3L 17968142 intron Eip75B - chr3L 17968196 intron Eip75B - chr3L 17968249 intron Eip75B - chr3L_9_17965001 chr3L_17965001 RAL-26 859 chr3L 18021361 18021382 chr3L 18021451 18021474 6 92 2.5 2.0 2.2 1.9 113 chr3L 18021361 intron Eip75B - chr3L 18021418 intron Eip75B - chr3L 18021474 intron Eip75B - chr3L_6_18020001 chr3L_18020001 RAL-26 860 chr3L 18029964 18029981 chr3L 18030041 18030058 4 77 0.5 0.0 0.2 3.3 94 chr3L 18029964 intron Eip75B - chr3L 18030011 intron Eip75B - chr3L 18030058 intron Eip75B - chr3L_4_18030001 chr3L_18030001 RAL-26 861 chr3L 18042247 18042266 chr3L 18042325 18042344 5 78 1.5 0.5 1.0 2.5 97 chr3L 18042247 intron Eip75B - chr3L 18042296 intron Eip75B - chr3L 18042344 intron Eip75B - chr3L_5_18040001 chr3L_18040001 RAL-26 862 chr3L 18047707 18047738 chr3L 18056763 18056795 roo 4 9056 0.0 1.0 0.5 2.7 9088 chr3L 18047707 intron Eip75B - chr3L 18052251 intron Eip75B - chr3L 18056795 intron Eip75B - chr3L_4_18050001 chr3L_18050001 RAL-26 863 chr3L 18118218 18118241 chr3L 18118296 18118319 4 78 1.0 1.0 1.0 2.0 101 chr3L 18118218 3` UTR,intron CG32195 +,CG7341 + chr3L 18118268 3` UTR,intron CG32195 +,CG7341 + chr3L 18118319 3` UTR,intron CG32195 +,CG7341 + chr3L_4_18115001 chr3L_18115001 RAL-26 864 chr3L 18119657 18119679 chr3L 18119755 18119777 4 98 0.0 5.5 2.8 1.1 120 chr3L 18119657 intron CG7341 + chr3L 18119717 intron CG7341 + chr3L 18119777 intron CG7341 + chr3L_4_18115001 chr3L_18115001 RAL-26 865 chr3L 18383461 18383467 chr3L 18383537 18383554 4 84 4.5 3.0 3.8 0.8 93 chr3L 18383461 intergenic not near genes chr3L 18383508 intergenic not near genes chr3L 18383554 intergenic not near genes chr3L_4_18380001 chr3L_18380001 RAL-26 866 chr3L 18456278 18456298 chr3L 18456366 18456386 7 88 1.5 2.5 2.0 2.3 108 chr3L 18456278 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456386 intergenic CR44670 - chr3L_7_18455001 chr3L_18455001 RAL-26 867 chr3L 18528625 18528651 chr3L 18537786 18537812 roo 6 9161 4.0 0.0 2.0 2.0 9187 chr3L 18528625 intergenic not near genes chr3L 18533218 intergenic not near genes chr3L 18537812 intergenic not near genes chr3L_6_18530001 chr3L_18530001 RAL-26 868 chr3L 18538630 18538659 chr3L 18539123 18539152 13 492 0.5 3.5 2.0 4.3 522 chr3L 18538630 intergenic not near genes chr3L 18538891 intergenic not near genes chr3L 18539152 intergenic not near genes chr3L_13_18535001 chr3L_18535001 RAL-26 869 chr3L 18638429 18638459 chr3L 18638877 18638907 6 448 1.0 3.5 2.2 1.9 478 chr3L 18638429 intron MYPT-75D + chr3L 18638668 intron MYPT-75D + chr3L 18638907 intron MYPT-75D + chr3L_6_18635001 chr3L_18635001 RAL-26 870 chr3L 18650457 18650485 chr3L 18650551 18650562 4 90 1.5 3.0 2.2 1.2 105 chr3L 18650457 intron MYPT-75D + chr3L 18650510 intron MYPT-75D + chr3L 18650562 intron MYPT-75D + chr3L_4_18650001 chr3L_18650001 RAL-26 871 chr3L 18656182 18656219 chr3L 18656267 18656304 13 84 3.0 4.5 3.8 2.7 122 chr3L 18656182 intron MYPT-75D + chr3L 18656243 intron MYPT-75D + chr3L 18656304 intron MYPT-75D + chr3L_13_18655001 chr3L_18655001 RAL-26 872 chr3L 18721778 18721806 chr3L 18721869 18721897 10 91 3.5 3.0 3.2 2.4 119 chr3L 18721778 intergenic CG12477 - chr3L 18721838 intergenic CG12477 - chr3L 18721897 3` UTR CG12477 - chr3L_10_18720001 chr3L_18720001 RAL-26 873 chr3L 18772408 18772439 chr3L 18781089 18781120 roo 8 8681 1.5 1.5 1.5 3.2 8712 chr3L 18772408 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781120 intron ftz-f1 - chr3L_8_18775001 chr3L_18775001 RAL-26 874 chr3L 18833786 18833806 chr3L 18834950 18834970 1360 4 1164 2.0 2.0 2.0 1.3 1184 chr3L 18833786 intron Indy - chr3L 18834378 intron Indy - chr3L 18834970 intron Indy - chr3L_4_18830001 chr3L_18830001 RAL-26 875 chr3L 18839736 18839761 chr3L 18839819 18839844 8 83 0.0 0.0 0.0 8.0 108 chr3L 18839736 intron Indy - chr3L 18839790 intron Indy - chr3L 18839844 intron Indy - chr3L_8_18835001 chr3L_18835001 RAL-26 876 chr3L 18861769 18861794 chr3L 18861862 18861887 7 93 0.0 4.5 2.2 2.2 118 chr3L 18861769 intergenic not near genes chr3L 18861828 intergenic not near genes chr3L 18861887 intergenic not near genes chr3L_7_18860001 chr3L_18860001 RAL-26 877 chr3L 18942856 18942876 chr3L 18942969 18942989 6 113 2.5 2.0 2.2 1.9 133 chr3L 18942856 intron CG32204 - chr3L 18942922 intron CG32204 - chr3L 18942989 intron CG32204 - chr3L_6_18940001 chr3L_18940001 RAL-26 878 chr3L 19008847 19008867 chr3L 19009185 19009203 jockey 5 338 2.0 4.0 3.0 1.2 356 chr3L 19008847 intron nkd - chr3L 19009025 intron nkd - chr3L 19009203 intron nkd - chr3L_5_19005001 chr3L_19005001 RAL-26 879 chr3L 19082042 19082071 chr3L 19082138 19082173 5 101 3.5 1.0 2.2 1.6 131 chr3L 19082042 intron Mkp3 - chr3L 19082108 intron Mkp3 - chr3L 19082173 intron Mkp3 - chr3L_5_19080001 chr3L_19080001 RAL-26 880 chr3L 19115642 19115676 chr3L 19115820 19115840 BS 4 172 3.5 5.0 4.2 0.8 198 chr3L 19115642 intron CG14082 - chr3L 19115741 intron CG14082 - chr3L 19115840 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-26 881 chr3L 19117041 19117069 chr3L 19124487 19124516 mdg1 8 7444 3.0 2.0 2.5 2.3 7475 chr3L 19117041 intron CG14082 - chr3L 19120778 intron CG14082 - chr3L 19124516 intron CG14082 - chr3L_8_19120001 chr3L_19120001 RAL-26 882 chr3L 19138556 19138587 chr3L 19138637 19138658 7 76 4.5 2.5 3.5 1.6 102 chr3L 19138556 intron CG14082 - chr3L 19138607 intron CG14082 - chr3L 19138658 intron CG14082 - chr3L_7_19135001 chr3L_19135001 RAL-26 883 chr3L 19173719 19173737 chr3L 19173869 19173888 8 150 2.5 2.0 2.2 2.5 169 chr3L 19173719 intron fz2 - chr3L 19173804 intron fz2 - chr3L 19173888 intron fz2 - chr3L_8_19170001 chr3L_19170001 RAL-26 884 chr3L 19182393 19182418 chr3L 19182472 19182499 6 81 0.5 2.0 1.2 2.7 106 chr3L 19182393 intron fz2 - chr3L 19182446 intron fz2 - chr3L 19182499 intron fz2 - chr3L_6_19180001 chr3L_19180001 RAL-26 885 chr3L 19208064 19208092 chr3L 19209438 19209466 Doc 7 1374 2.0 3.0 2.5 2.0 1402 chr3L 19208064 intron fz2 - chr3L 19208765 intron fz2 - chr3L 19209466 intron fz2 - chr3L_7_19205001 chr3L_19205001 RAL-26 886 chr3L 19244113 19244139 chr3L 19244191 19244217 15 78 4.0 4.0 4.0 3.0 104 chr3L 19244113 intergenic not near genes chr3L 19244165 intergenic not near genes chr3L 19244217 intergenic not near genes chr3L_15_19240001 chr3L_19240001 RAL-26 887 chr3L 19279680 19279704 chr3L 19279769 19279796 8 91 4.5 4.0 4.2 1.5 116 chr3L 19279680 intron CG14086 + chr3L 19279738 exon CG14086 + chr3L 19279796 exon CG14086 + chr3L_8_19275001 chr3L_19275001 RAL-26 888 chr3L 19335750 19335757 chr3L 19335837 19335844 4 87 2.5 1.5 2.0 1.3 94 chr3L 19335750 intron pip - chr3L 19335797 intron pip - chr3L 19335844 intron pip - chr3L_4_19335001 chr3L_19335001 RAL-26 889 chr3L 19346188 19346202 chr3L 19346276 19346290 5 88 2.5 2.5 2.5 1.4 102 chr3L 19346188 intron CG32206 - chr3L 19346239 intron CG32206 - chr3L 19346290 intron CG32206 - chr3L_5_19345001 chr3L_19345001 RAL-26 890 chr3L 19423067 19423074 chr3L 19423158 19423165 5 91 7.0 7.5 7.2 0.6 98 chr3L 19423067 3` UTR CR32205 - chr3L 19423116 3` UTR CR32205 - chr3L 19423165 3` UTR CR32205 - chr3L_5_19420001 chr3L_19420001 RAL-26 891 chr3L 19426754 19426784 chr3L 19426831 19426862 8 76 4.0 3.5 3.8 1.7 108 chr3L 19426754 intergenic not near genes chr3L 19426808 intergenic not near genes chr3L 19426862 intergenic not near genes chr3L_8_19425001 chr3L_19425001 RAL-26 892 chr3L 19527921 19527955 chr3L 19528000 19528034 5 79 2.0 1.0 1.5 2.0 113 chr3L 19527921 intergenic not near genes chr3L 19527978 intergenic not near genes chr3L 19528034 intergenic not near genes chr3L_5_19525001 chr3L_19525001 RAL-26 893 chr3L 19848506 19848528 chr3L 19857696 19857718 roo 4 9190 0.5 3.5 2.0 1.3 9212 chr3L 19848506 intron Papss + chr3L 19853112 intron Papss + chr3L 19857718 intron Papss + chr3L_4_19850001 chr3L_19850001 RAL-26 894 chr3L 19861823 19861851 chr3L 19863611 19863639 S-element 10 1788 1.0 1.0 1.0 5.0 1816 chr3L 19861823 5` UTR CR45433 + chr3L 19862731 intergenic not near genes chr3L 19863639 intergenic not near genes chr3L_10_19860001 chr3L_19860001 RAL-26 895 chr3L 19981206 19981228 chr3L 19981285 19981308 4 80 0.5 0.0 0.2 3.3 102 chr3L 19981206 intergenic CG17732 + chr3L 19981257 intergenic CG17732 + chr3L 19981308 intergenic CG17732 + chr3L_4_19980001 chr3L_19980001 RAL-26 896 chr3L 20127900 20127932 chr3L 20127976 20128008 7 75 1.5 6.0 3.8 1.5 108 chr3L 20127900 intergenic not near genes chr3L 20127954 intergenic not near genes chr3L 20128008 intergenic not near genes chr3L_7_20125001 chr3L_20125001 RAL-26 897 chr3L 20257345 20257353 chr3L 20258465 20258473 pogo 5 1120 1.0 6.5 3.8 1.0 1128 chr3L 20257345 intron rdgC + chr3L 20257909 intron rdgC + chr3L 20258473 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-26 898 chr3L 20257356 20257363 chr3L 20258457 20258483 pogo 5 1116 0.5 4.5 2.5 1.4 1127 chr3L 20257356 intron rdgC + chr3L 20257920 intron rdgC + chr3L 20258483 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-26 899 chr3L 20283677 20283707 chr3L 20283761 20283791 5 84 1.5 0.5 1.0 2.5 114 chr3L 20283677 intron gogo - chr3L 20283734 intron gogo - chr3L 20283791 intron gogo - chr3L_5_20280001 chr3L_20280001 RAL-26 900 chr3L 20345611 20345639 chr3L 20345691 20345720 12 80 2.5 2.0 2.2 3.8 109 chr3L 20345611 intergenic Rbbp5 - chr3L 20345666 intergenic Rbbp5 - chr3L 20345720 intergenic Rbbp5 - chr3L_12_20345001 chr3L_20345001 RAL-26 901 chr3L 20386942 20386972 chr3L 20387044 20387074 11 102 3.0 1.5 2.2 3.4 132 chr3L 20386942 intron fbl + chr3L 20387008 intron fbl + chr3L 20387074 intron fbl + chr3L_11_20385001 chr3L_20385001 RAL-26 902 chr3L 20476753 20476769 chr3L 20484352 20484368 springer 5 7599 3.5 2.0 2.8 1.3 7615 chr3L 20476753 3` UTR isoQC + chr3L 20480560 intergenic not near genes chr3L 20484368 3` UTR ZnT77C - chr3L_5_20480001 chr3L_20480001 RAL-26 903 chr3L 20590063 20590092 chr3L 20590602 20590631 412 7 539 3.5 3.5 3.5 1.6 568 chr3L 20590063 intergenic not near genes chr3L 20590347 intergenic not near genes chr3L 20590631 intergenic not near genes chr3L_7_20590001 chr3L_20590001 RAL-26 904 chr3L 20710769 20710784 chr3L 20710846 20710861 4 77 0.5 4.5 2.5 1.1 92 chr3L 20710769 intergenic not near genes chr3L 20710815 intergenic not near genes chr3L 20710861 intergenic not near genes chr3L_4_20710001 chr3L_20710001 RAL-26 905 chr3L 20913758 20913782 chr3L 20913840 20913864 8 82 1.5 5.0 3.2 1.9 106 chr3L 20913758 intergenic CR43930 - chr3L 20913811 intergenic CR43930 - chr3L 20913864 intergenic CR43930 - chr3L_8_20910001 chr3L_20910001 RAL-26 906 chr3L 21014907 21014947 chr3L 21023395 21023420 Tirant 9 8479 0.0 3.0 1.5 3.6 8513 chr3L 21014907 intron skd - chr3L 21019164 intron skd - chr3L 21023420 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-26 907 chr3L 21130621 21130658 chr3L 21130713 21130750 17 92 1.5 2.0 1.8 6.1 129 chr3L 21130621 intron ko - chr3L 21130686 intron ko - chr3L 21130750 intron ko - chr3L_17_21130001 chr3L_21130001 RAL-26 908 chr3L 21151864 21151885 chr3L 21156948 21156967 flea 5 5084 2.0 2.5 2.2 1.6 5103 chr3L 21151864 intron Ac78C - chr3L 21154416 intron Ac78C - chr3L 21156967 intron Ac78C - chr3L_5_21150001 chr3L_21150001 RAL-26 909 chr3L 21158597 21158625 chr3L 21158673 21158700 10 75 1.5 1.5 1.5 4.0 103 chr3L 21158597 intron Ac78C - chr3L 21158648 intron Ac78C - chr3L 21158700 intron Ac78C - chr3L_10_21155001 chr3L_21155001 RAL-26 910 chr3L 21194176 21194185 chr3L 21194309 21194318 5 133 2.0 6.0 4.0 1.0 142 chr3L 21194176 intergenic not near genes chr3L 21194247 intergenic not near genes chr3L 21194318 intergenic park - chr3L_5_21190001 chr3L_21190001 RAL-26 911 chr3L 21232459 21232490 chr3L 21232580 21232611 13 121 4.5 4.0 4.2 2.5 152 chr3L 21232459 intron Eip78C + chr3L 21232535 intron Eip78C + chr3L 21232611 intron Eip78C + chr3L_13_21230001 chr3L_21230001 RAL-26 912 chr3L 21235666 21235678 chr3L 21235761 21235789 9 108 2.5 3.0 2.8 2.4 123 chr3L 21235666 intron Eip78C + chr3L 21235728 intron Eip78C + chr3L 21235789 intron Eip78C + chr3L_9_21235001 chr3L_21235001 RAL-26 913 chr3L 21243747 21243767 chr3L 21251310 21251330 412 9 7563 2.5 5.0 3.8 1.9 7583 chr3L 21243747 intron Eip78C + chr3L 21247538 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_9_21245001 chr3L_21245001 RAL-26 914 chr3L 21347075 21347109 chr3L 21347153 21347187 4 78 2.5 4.0 3.2 1.0 112 chr3L 21347075 intron,intron CG32436 +,ebd2 - chr3L 21347131 intron,intron CG32436 +,ebd2 - chr3L 21347187 intron,intron CG32436 +,ebd2 - chr3L_4_21345001 chr3L_21345001 RAL-26 915 chr3L 21361737 21361752 chr3L 21362679 21362706 G2 4 951 1.0 1.0 1.0 2.0 969 chr3L 21361737 intergenic not near genes chr3L 21362222 intergenic not near genes chr3L 21362706 intergenic not near genes chr3L_4_21360001 chr3L_21360001 RAL-26 916 chr3L 21415144 21415165 chr3L 21415227 21415248 6 83 1.0 3.0 2.0 2.0 104 chr3L 21415144 intron rgn + chr3L 21415196 intron rgn + chr3L 21415248 intron rgn + chr3L_6_21415001 chr3L_21415001 RAL-26 917 chr3L 21415532 21415555 chr3L 21415610 21415633 5 78 5.5 2.5 4.0 1.0 101 chr3L 21415532 intron rgn + chr3L 21415582 intron rgn + chr3L 21415633 intron rgn + chr3L_5_21415001 chr3L_21415001 RAL-26 918 chr3L 21498833 21498866 chr3L 21500469 21500502 1360 7 1632 3.0 3.5 3.2 1.7 1669 chr3L 21498833 intron Glg1 - chr3L 21499668 intron Glg1 - chr3L 21500502 intron Glg1 - chr3L_7_21495001 chr3L_21495001 RAL-26 919 chr3L 21653522 21653533 chr3L 21653601 21653612 9 79 10.5 5.0 7.8 1.0 90 chr3L 21653522 intron CG43980 + chr3L 21653567 intron CG43980 + chr3L 21653612 intron CG43980 + chr3L_9_21650001 chr3L_21650001 RAL-26 920 chr3L 21769600 21769636 chr3L 21769678 21769713 10 75 4.5 5.0 4.8 1.7 113 chr3L 21769600 intron,intron Syn1 -,CG42689 + chr3L 21769656 intron,intron Syn1 -,CG42689 + chr3L 21769713 intron,intron Syn1 -,CG42689 + chr3L_10_21765001 chr3L_21765001 RAL-26 921 chr3L 21776674 21776701 chr3L 21776761 21776788 5 87 0.0 3.0 1.5 2.0 114 chr3L 21776674 intron,intron CG42689 +,CG42552 + chr3L 21776731 intron,intron CG42689 +,CG42552 + chr3L 21776788 intron,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-26 922 chr3L 22223437 22223471 chr3L 22223598 22223632 11 160 3.0 2.0 2.5 3.1 195 chr3L 22223437 intron olf413 + chr3L 22223534 intron olf413 + chr3L 22223632 intron olf413 + chr3L_11_22220001 chr3L_22220001 RAL-26 923 chr3L 22379933 22379968 chr3L 22380032 22380067 10 98 1.5 3.0 2.2 3.1 134 chr3L 22379933 intron Ten-m - chr3L 22380000 intron Ten-m - chr3L 22380067 intron Ten-m - chr3L_10_22380001 chr3L_22380001 RAL-26 924 chr3L 22413874 22413893 chr3L 22413957 22413977 10 84 2.0 5.0 3.5 2.2 103 chr3L 22413874 intergenic not near genes chr3L 22413926 intergenic not near genes chr3L 22413977 intergenic not near genes chr3L_10_22410001 chr3L_22410001 RAL-26 925 chr3L 22555768 22555802 chr3L 22563238 22563272 blood 9 7467 1.5 0.0 0.8 5.0 7504 chr3L 22555768 intergenic not near genes chr3L 22559520 intergenic not near genes chr3L 22563272 intergenic not near genes chr3L_9_22555001 chr3L_22555001 RAL-26 926 chr3L 22570429 22570452 chr3L 22570573 22570596 9 144 2.5 3.0 2.8 2.4 167 chr3L 22570429 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570596 intergenic not near genes chr3L_9_22570001 chr3L_22570001 RAL-26 927 chr3L 22577625 22577637 chr3L 22582411 22582425 Doc 5 4787 6.5 4.5 5.5 0.8 4800 chr3L 22577625 intergenic not near genes chr3L 22580025 intergenic not near genes chr3L 22582425 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-26 928 chr3L 22617192 22617222 chr3L 22624644 22624674 blood 9 7452 4.0 2.0 3.0 2.2 7482 chr3L 22617192 intron CG14459 - chr3L 22620933 intron CG14459 - chr3L 22624674 intron CG14459 - chr3L_9_22620001 chr3L_22620001 RAL-26 929 chr3L 22626870 22626898 chr3L 22626960 22626988 6 90 2.0 1.5 1.8 2.1 118 chr3L 22626870 intron CG14459 - chr3L 22626929 intron CG14459 - chr3L 22626988 intron CG14459 - chr3L_6_22625001 chr3L_22625001 RAL-26 930 chr3L 22669972 22670004 chr3L 22670065 22670096 10 93 1.5 5.0 3.2 2.4 124 chr3L 22669972 5` UTR CG14457 + chr3L 22670034 intron CG14457 + chr3L 22670096 intron CG14457 + chr3L_10_22670001 chr3L_22670001 RAL-26 931 chr3L 22682227 22682238 chr3L 22682327 22682338 4 98 4.5 4.0 4.2 0.8 111 chr3L 22682227 intergenic not near genes chr3L 22682282 intergenic not near genes chr3L 22682338 intergenic not near genes chr3L_4_22680001 chr3L_22680001 RAL-26 932 chr3L 22726233 22726455 chr3L 22726317 22726540 7 84 1.5 1.0 1.2 3.2 307 chr3L 22726233 3` UTR,3` UTR mael +,CG14450 - chr3L 22726386 3` UTR CG14450 - chr3L 22726540 3` UTR CG14450 - chr3L_7_22725001 chr3L_22725001 RAL-26 933 chr3L 22752529 22752548 chr3L 22752821 22752840 8 292 0.0 1.5 0.8 4.4 311 chr3L 22752529 intron SPoCk + chr3L 22752684 intron SPoCk + chr3L 22752840 intron SPoCk + chr3L_8_22750001 chr3L_22750001 RAL-26 934 chr3L 22771820 22771844 chr3L 22771903 22771927 8 82 2.0 2.0 2.0 2.7 107 chr3L 22771820 intron SPoCk + chr3L 22771874 intron SPoCk + chr3L 22771927 intron SPoCk + chr3L_8_22770001 chr3L_22770001 RAL-26 935 chr3L 22865980 22866009 chr3L 22867113 22867142 Doc 5 1133 1.5 1.0 1.2 2.3 1162 chr3L 22865980 intron CG33170 + chr3L 22866561 intron CG33170 + chr3L 22867142 intron CG33170 + chr3L_5_22865001 chr3L_22865001 RAL-26 936 chr3L 19220633 19220637 chr3L 22908066 22908066 6 3687430 19.0 10.5 14.8 0.4 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-26 937 chr3L 22961085 22961090 chr3L 22961169 22961174 5 84 7.0 3.0 5.0 0.8 89 chr3L 22961085 5` UTR CR45758 + chr3L 22961130 5` UTR CR45758 + chr3L 22961174 5` UTR CR45758 + chr3L_5_22960001 chr3L_22960001 RAL-26 938 chr3L 22974359 22974393 chr3L 22974438 22974471 9 79 2.5 2.5 2.5 2.6 112 chr3L 22974359 intergenic not near genes chr3L 22974415 intergenic not near genes chr3L 22974471 intergenic not near genes chr3L_9_22970001 chr3L_22970001 RAL-26 939 chr3L 22989862 22989895 chr3L 22996836 22996869 297 7 6974 2.0 0.5 1.2 3.2 7007 chr3L 22989862 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996869 intergenic not near genes chr3L_7_22990001 chr3L_22990001 RAL-26 940 chr3L 23182820 23182849 chr3L 23182894 23182925 8 76 0.0 3.0 1.5 3.2 105 chr3L 23182820 intron CG34031 + chr3L 23182872 intron CG34031 + chr3L 23182925 intron CG34031 + chr3L_8_23180001 chr3L_23180001 RAL-26 941 chr3L 23228569 23228588 chr3L 23228781 23228798 6 212 2.5 2.0 2.2 1.9 229 chr3L 23228569 intron nAChRalpha4 + chr3L 23228684 intron nAChRalpha4 + chr3L 23228798 intron nAChRalpha4 + chr3L_6_23225001 chr3L_23225001 RAL-26 942 chr3L 23228589 23228598 chr3L 23228778 23228804 4 204 2.5 1.5 2.0 1.3 215 chr3L 23228589 intron nAChRalpha4 + chr3L 23228696 intron nAChRalpha4 + chr3L 23228804 intron nAChRalpha4 + chr3L_4_23225001 chr3L_23225001 RAL-26 943 chr3L 23245199 23245213 chr3L 23245317 23245331 4 118 0.5 1.0 0.8 2.2 132 chr3L 23245199 intron nAChRalpha4 + chr3L 23245265 intron nAChRalpha4 + chr3L 23245331 intron nAChRalpha4 + chr3L_4_23245001 chr3L_23245001 RAL-26 944 chr3L 23254938 23254971 chr3L 23255040 23255073 18 100 2.5 1.5 2.0 6.0 135 chr3L 23254938 intron nAChRalpha4 + chr3L 23255006 intron nAChRalpha4 + chr3L 23255073 intron nAChRalpha4 + chr3L_18_23255001 chr3L_23255001 RAL-26 945 chr3L 23428240 23428267 chr3L 23428320 23428347 9 80 4.0 0.5 2.2 2.8 107 chr3L 23428240 intergenic not near genes chr3L 23428294 intergenic not near genes chr3L 23428347 intergenic not near genes chr3L_9_23425001 chr3L_23425001 RAL-26 946 chr3L 24009671 24009685 chr3L 24009853 24009867 6 182 1.0 1.5 1.2 2.7 196 chr3L 24009671 intergenic CR40053 - chr3L 24009769 intergenic CR40053 - chr3L 24009867 intergenic CR40053 - chr3L_6_24005001 chr3L_24005001 RAL-26 947 chr3L 24021280 24021312 chr3L 24022437 24022461 1360 4 1155 0.5 1.5 1.0 2.0 1181 chr3L 24021280 intergenic not near genes chr3L 24021870 intergenic not near genes chr3L 24022461 intergenic not near genes chr3L_4_24020001 chr3L_24020001 RAL-26 948 chr3L 24084486 24084515 chr3L 24084574 24084602 10 88 2.0 3.5 2.8 2.6 116 chr3L 24084486 intron Snap25 + chr3L 24084544 intron Snap25 + chr3L 24084602 intron Snap25 + chr3L_10_24080001 chr3L_24080001 RAL-26 949 chr3L 24168791 24168810 chr3L 24176119 24176138 ZAM 8 7326 5.5 2.5 4.0 1.6 7347 chr3L 24168791 intron Snap25 + chr3L 24172464 intron Snap25 + chr3L 24176138 intron Snap25 + chr3L_8_24170001 chr3L_24170001 RAL-26 950 chr3L 24312135 24312159 chr3L 24312264 24312287 4 129 1.0 1.0 1.0 2.0 152 chr3L 24312135 intergenic not near genes chr3L 24312211 intergenic not near genes chr3L 24312287 intergenic not near genes chr3L_4_24310001 chr3L_24310001 RAL-26 951 chr3L 25464024 25464097 chr3L 25464111 25464195 9 92 4.0 4.0 4.0 1.8 171 chr3L 25464024 intergenic not near genes chr3L 25464110 intergenic not near genes chr3L 25464195 intergenic not near genes chr3L_9_25460001 chr3L_25460001 RAL-26 952 chr3L 26694935 26694944 chr3L 26695011 26695024 4 79 3.0 1.5 2.2 1.2 89 chr3L 26694935 intergenic not near genes chr3L 26694980 intergenic not near genes chr3L 26695024 intergenic not near genes chr3L_4_26690001 chr3L_26690001 RAL-26 953 chr3L 27368899 27368910 chr3L 27369444 27369455 4 545 1.5 0.5 1.0 2.0 556 chr3L 27368899 intron Dbp80 + chr3L 27369177 intron Dbp80 + chr3L 27369455 intron Dbp80 + chr3L_4_27365001 chr3L_27365001 RAL-26 954 chr3L 27390688 27390711 chr3L 27390767 27390790 9 79 25.0 24.0 24.5 0.4 102 chr3L 27390688 intron Dbp80 + chr3L 27390739 intron Dbp80 + chr3L 27390790 intron Dbp80 + chr3L_9_27390001 chr3L_27390001 RAL-26 955 chr3R 758893 758896 chr3R 758972 758980 4 93 2.5 0.0 1.2 1.8 87 chr3R 758893 intergenic not near genes chr3R 758936 intergenic not near genes chr3R 758980 intergenic not near genes chr3R_4_755001 chr3R_755001 RAL-26 956 chr3R 2534141 2534167 chr3R 2541702 2541736 5 7567 10.0 7.5 8.8 0.5 7595 chr3R 2534141 intergenic not near genes chr3R 2537938 intergenic not near genes chr3R 2541736 intergenic not near genes chr3R_5_2535001 chr3R_2535001 RAL-26 957 chr3R 3877471 3877504 chr3R 3877612 3877643 12 139 2.5 3.0 2.8 3.2 172 chr3R 3877471 intergenic not near genes chr3R 3877557 intergenic not near genes chr3R 3877643 intergenic not near genes chr3R_12_3875001 chr3R_3875001 RAL-26 958 chr3R 4063809 4063830 chr3R 4069089 4069110 7 5280 3.0 8.0 5.5 1.1 5301 chr3R 4063809 intergenic not near genes chr3R 4066460 intergenic not near genes chr3R 4069110 intergenic not near genes chr3R_7_4065001 chr3R_4065001 RAL-26 959 chr3R 4493152 4493182 chr3R 4493231 4493261 5 79 3.5 1.5 2.5 1.4 109 chr3R 4493152 3` UTR CG34357 - chr3R 4493206 3` UTR CG34357 - chr3R 4493261 3` UTR CG34357 - chr3R_5_4490001 chr3R_4490001 RAL-26 960 chr3R 4593469 4593494 chr3R 4593551 4593576 11 82 2.5 3.5 3.0 2.8 107 chr3R 4593469 intergenic not near genes chr3R 4593522 intergenic not near genes chr3R 4593576 intergenic not near genes chr3R_11_4590001 chr3R_4590001 RAL-26 961 chr3R 4609546 4609579 chr3R 4610710 4610743 1360 6 1164 3.5 2.0 2.8 1.6 1197 chr3R 4609546 intergenic not near genes chr3R 4610144 intergenic not near genes chr3R 4610743 intergenic not near genes chr3R_6_4610001 chr3R_4610001 RAL-26 962 chr3R 4764460 4764486 chr3R 4764693 4764719 7 233 3.5 3.0 3.2 1.7 259 chr3R 4764460 intron,intron atms +,CG44098 - chr3R 4764590 intron,intron atms +,CG44098 - chr3R 4764719 intron,intron atms +,CG44098 - chr3R_7_4760001 chr3R_4760001 RAL-26 963 chr3R 4769158 4769191 chr3R 4769236 4769268 8 78 2.5 1.0 1.8 2.9 110 chr3R 4769158 intron,intron atms +,CG44098 - chr3R 4769213 intron,intron atms +,CG44098 - chr3R 4769268 intron,intron atms +,CG44098 - chr3R_8_4765001 chr3R_4765001 RAL-26 964 chr3R 4887477 4887512 chr3R 4894854 4894889 rover 4 7373 2.5 1.0 1.8 1.4 7412 chr3R 4887477 intergenic not near genes chr3R 4891183 intergenic not near genes chr3R 4894889 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-26 965 chr3R 4904877 4904889 chr3R 18214682 18214694 5 13309805 10.0 7.0 8.5 0.5 13309817 chr3R 4904877 intergenic not near genes chr3R 11559786 3` UTR CG10898 + chr3R 18214694 3` UTR CG7985 + chr3R_5_11555001 chr3R_11555001 RAL-26 966 chr3R 4905024 4905049 chr3R 4905159 4905184 8 135 1.5 2.5 2.0 2.7 160 chr3R 4905024 intergenic not near genes chr3R 4905104 intergenic not near genes chr3R 4905184 intergenic not near genes chr3R_8_4905001 chr3R_4905001 RAL-26 967 chr3R 4975933 4975966 chr3R 4976034 4976067 6 96 1.5 1.5 1.5 2.4 134 chr3R 4975933 intergenic not near genes chr3R 4976000 intergenic not near genes chr3R 4976067 intergenic not near genes chr3R_6_4975001 chr3R_4975001 RAL-26 968 chr3R 5067982 5068004 chr3R 5073499 5073521 mdg3 8 5517 2.5 2.5 2.5 2.3 5539 chr3R 5067982 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073521 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-26 969 chr3R 5250881 5250914 chr3R 5250993 5251024 4 111 2.5 3.5 3.0 1.0 143 chr3R 5250881 intron CG12163 - chr3R 5250952 intron CG12163 - chr3R 5251024 intron CG12163 - chr3R_4_5250001 chr3R_5250001 RAL-26 970 chr3R 5278090 5278122 chr3R 5278171 5278203 13 81 4.0 2.0 3.0 3.2 113 chr3R 5278090 intron mtd - chr3R 5278146 intron mtd - chr3R 5278203 intron mtd - chr3R_13_5275001 chr3R_5275001 RAL-26 971 chr3R 5282988 5282993 chr3R 5283069 5283074 6 81 9.0 11.5 10.2 0.5 86 chr3R 5282988 intron mtd - chr3R 5283031 intron mtd - chr3R 5283074 intron mtd - chr3R_6_5280001 chr3R_5280001 RAL-26 972 chr3R 5626458 5626466 chr3R 5626549 5626557 4 91 6.5 4.0 5.2 0.6 99 chr3R 5626458 intergenic not near genes chr3R 5626508 intergenic not near genes chr3R 5626557 intergenic not near genes chr3R_4_5625001 chr3R_5625001 RAL-26 973 chr3R 5626472 5626493 chr3R 5626548 5626584 8 87 2.5 4.0 3.2 1.9 112 chr3R 5626472 intergenic not near genes chr3R 5626528 intergenic not near genes chr3R 5626584 intergenic not near genes chr3R_8_5625001 chr3R_5625001 RAL-26 974 chr3R 5627010 5627044 chr3R 5627126 5627159 7 115 0.5 3.0 1.8 2.5 149 chr3R 5627010 intergenic not near genes chr3R 5627084 intergenic not near genes chr3R 5627159 intergenic not near genes chr3R_7_5625001 chr3R_5625001 RAL-26 975 chr3R 5746016 5746040 chr3R 5746257 5746277 pogo 7 240 2.0 2.5 2.2 2.2 261 chr3R 5746016 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746277 3` UTR Madm + chr3R_7_5745001 chr3R_5745001 RAL-26 976 chr3R 5809116 5809144 chr3R 5809357 5809385 pogo 6 241 0.5 2.5 1.5 2.4 269 chr3R 5809116 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809385 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-26 977 chr3R 5822388 5822407 chr3R 5823555 5823574 1360 4 1167 3.0 2.5 2.8 1.1 1186 chr3R 5822388 3` UTR CG2023 - chr3R 5822981 3` UTR CG2023 - chr3R 5823574 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-26 978 chr3R 5895954 5895985 chr3R 5896168 5896199 6 214 0.5 2.5 1.5 2.4 245 chr3R 5895954 intron CG34113 - chr3R 5896076 intron CG34113 - chr3R 5896199 intron CG34113 - chr3R_6_5895001 chr3R_5895001 RAL-26 979 chr3R 5927559 5927581 chr3R 5927799 5927821 pogo 4 240 3.0 2.0 2.5 1.1 262 chr3R 5927559 intron CG34113 - chr3R 5927690 intron CG34113 - chr3R 5927821 intron CG34113 - chr3R_4_5925001 chr3R_5925001 RAL-26 980 chr3R 6015964 6015994 chr3R 6024445 6024475 Tirant 13 8478 4.5 3.0 3.8 2.7 8511 chr3R 6015964 intergenic not near genes chr3R 6020220 intergenic not near genes chr3R 6024475 intergenic not near genes chr3R_13_6020001 chr3R_6020001 RAL-26 981 chr3R 6048443 6048478 chr3R 6048526 6048541 13 81 2.0 3.5 2.8 3.4 98 chr3R 6048443 intergenic not near genes chr3R 6048492 intergenic not near genes chr3R 6048541 intergenic not near genes chr3R_13_6045001 chr3R_6045001 RAL-26 982 chr3R 6117412 6117441 chr3R 6117532 6117562 8 121 3.0 1.0 2.0 2.7 150 chr3R 6117412 intergenic not near genes chr3R 6117487 intergenic not near genes chr3R 6117562 intergenic not near genes chr3R_8_6115001 chr3R_6115001 RAL-26 983 chr3R 6158508 6158538 chr3R 6167091 6167121 Tirant 10 8582 6.5 2.0 4.2 1.9 8613 chr3R 6158508 intergenic not near genes chr3R 6162814 intergenic not near genes chr3R 6167121 intergenic CG1077 + chr3R_10_6160001 chr3R_6160001 RAL-26 984 chr3R 6578887 6578915 chr3R 6579007 6579035 10 120 2.0 3.5 2.8 2.6 148 chr3R 6578887 intron dpr11 - chr3R 6578961 intron dpr11 - chr3R 6579035 intron dpr11 - chr3R_10_6575001 chr3R_6575001 RAL-26 985 chr3R 6604651 6604689 chr3R 6604730 6604768 16 79 3.5 2.5 3.0 4.0 117 chr3R 6604651 intergenic not near genes chr3R 6604710 intergenic not near genes chr3R 6604768 intergenic not near genes chr3R_16_6600001 chr3R_6600001 RAL-26 986 chr3R 6643230 6643258 chr3R 6643325 6643353 9 95 3.5 0.5 2.0 3.0 123 chr3R 6643230 3` UTR,exon CG31286 +,CG1315 - chr3R 6643292 3` UTR,intron CG31286 +,CG1315 - chr3R 6643353 intron CG1315 - chr3R_9_6640001 chr3R_6640001 RAL-26 987 chr3R 6737502 6737519 chr3R 6739289 6739306 Doc 6 1787 6.0 3.5 4.8 1.0 1804 chr3R 6737502 intron pb - chr3R 6738404 intron pb - chr3R 6739306 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-26 988 chr3R 6842781 6842813 chr3R 6842864 6842896 4 83 1.0 3.0 2.0 1.3 115 chr3R 6842781 intron Scr - chr3R 6842838 intron Scr - chr3R 6842896 intron Scr - chr3R_4_6840001 chr3R_6840001 RAL-26 989 chr3R 6877851 6877876 chr3R 6877971 6877996 4 120 2.0 4.0 3.0 1.0 145 chr3R 6877851 3` UTR CR44931 - chr3R 6877924 3` UTR CR44931 - chr3R 6877996 3` UTR CR44931 - chr3R_4_6875001 chr3R_6875001 RAL-26 990 chr3R 6891241 6891262 chr3R 6891316 6891338 5 74 1.0 1.5 1.2 2.3 97 chr3R 6891241 intergenic not near genes chr3R 6891290 intergenic not near genes chr3R 6891338 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-26 991 chr3R 6958316 6958340 chr3R 6958419 6958443 5 103 2.0 3.0 2.5 1.4 127 chr3R 6958316 intron Antp - chr3R 6958380 intron Antp - chr3R 6958443 intron Antp - chr3R_5_6955001 chr3R_6955001 RAL-26 992 chr3R 7026856 7026890 chr3R 7026942 7026976 12 86 2.0 2.0 2.0 4.0 120 chr3R 7026856 intergenic not near genes chr3R 7026916 intergenic not near genes chr3R 7026976 intergenic not near genes chr3R_12_7025001 chr3R_7025001 RAL-26 993 chr3R 7103299 7103312 chr3R 7103375 7103388 10 76 3.0 5.5 4.2 1.9 89 chr3R 7103299 intron Alh - chr3R 7103344 intron Alh - chr3R 7103388 intron Alh - chr3R_10_7100001 chr3R_7100001 RAL-26 994 chr3R 7574621 7574651 chr3R 7574701 7574733 6 81 1.0 0.5 0.8 3.3 112 chr3R 7574621 intron CG34127 - chr3R 7574677 intron CG34127 - chr3R 7574733 intron CG34127 - chr3R_6_7570001 chr3R_7570001 RAL-26 995 chr3R 7621552 7621561 chr3R 7621642 7621651 5 90 1.5 4.5 3.0 1.2 99 chr3R 7621552 intron CG34127 - chr3R 7621602 intron CG34127 - chr3R 7621651 intron CG34127 - chr3R_5_7620001 chr3R_7620001 RAL-26 996 chr3R 8090278 8090304 chr3R 8090455 8090481 6 177 1.0 2.5 1.8 2.1 203 chr3R 8090278 5` UTR CR44330 + chr3R 8090380 intergenic CR44330 + chr3R 8090481 intergenic CR44330 + chr3R_6_8090001 chr3R_8090001 RAL-26 997 chr3R 8094409 8094430 chr3R 8099714 8099735 Transpac 6 5305 1.0 1.5 1.2 2.7 5326 chr3R 8094409 intron CG7900 + chr3R 8097072 intron CG7900 + chr3R 8099735 intron CG7900 + chr3R_6_8095001 chr3R_8095001 RAL-26 998 chr3R 8101763 8101783 chr3R 8104847 8104867 G2 4 3084 5.0 0.5 2.8 1.1 3104 chr3R 8101763 exon CG7900 + chr3R 8103315 intron CG7900 + chr3R 8104867 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-26 999 chr3R 8154282 8154310 chr3R 8154367 8154395 13 85 4.0 3.5 3.8 2.7 113 chr3R 8154282 intron grn - chr3R 8154338 intron grn - chr3R 8154395 intron grn - chr3R_13_8150001 chr3R_8150001 RAL-26 1000 chr3R 8339246 8339247 chr3R 21907534 21907536 13 13568289 14.0 19.0 16.5 0.7 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_13_15120001 chr3R_15120001 RAL-26 1001 chr3R 8393581 8393604 chr3R 8393665 8393688 4 82 3.0 1.5 2.2 1.2 107 chr3R 8393581 intron CG45263 - chr3R 8393634 intron CG45263 - chr3R 8393688 intron CG45263 - chr3R_4_8390001 chr3R_8390001 RAL-26 1002 chr3R 8403009 8403034 chr3R 8412175 8412200 roo 9 9166 4.0 4.5 4.2 1.7 9191 chr3R 8403009 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412200 intron CG45263 - chr3R_9_8405001 chr3R_8405001 RAL-26 1003 chr3R 8570488 8570510 chr3R 8575118 8575146 HMS-Beagle 5 4635 2.5 5.5 4.0 1.0 4658 chr3R 8570488 intergenic not near genes chr3R 8572817 intergenic not near genes chr3R 8575146 intergenic not near genes chr3R_5_8570001 chr3R_8570001 RAL-26 1004 chr3R 8601770 8601796 chr3R 8610922 8610949 roo 8 9153 3.5 1.0 2.2 2.5 9179 chr3R 8601770 intron 5-HT2B + chr3R 8606360 intron 5-HT2B + chr3R 8610949 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 RAL-26 1005 chr3R 8707355 8707381 chr3R 8709796 8709822 jockey 6 2441 4.0 2.5 3.2 1.4 2467 chr3R 8707355 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709822 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-26 1006 chr3R 8825851 8825876 chr3R 8828093 8828118 6 2245 33.0 21.5 27.2 0.2 2267 chr3R 8825851 exon CG8379 + chr3R 8826984 exon CG8379 + chr3R 8828118 3` UTR pyd - chr3R_6_8825001 chr3R_8825001 RAL-26 1007 chr3R 9083141 9083175 chr3R 9083226 9083260 22 84 3.0 3.5 3.2 5.2 119 chr3R 9083141 intron pum - chr3R 9083200 intron pum - chr3R 9083260 intron pum - chr3R_22_9080001 chr3R_9080001 RAL-26 1008 chr3R 9089441 9089470 chr3R 9089520 9089549 11 79 1.5 3.0 2.2 3.4 108 chr3R 9089441 intron pum - chr3R 9089495 intron pum - chr3R 9089549 intron pum - chr3R_11_9085001 chr3R_9085001 RAL-26 1009 chr3R 9098449 9098468 chr3R 9098532 9098532 6 79 3.0 4.5 3.8 1.2 83 chr3R 9098449 intron pum - chr3R 9098490 intron pum - chr3R 9098532 intron pum - chr3R_6_9095001 chr3R_9095001 RAL-26 1010 chr3R 9101842 9101872 chr3R 9101940 9101970 5 98 0.5 0.5 0.5 3.3 128 chr3R 9101842 intron pum - chr3R 9101906 intron pum - chr3R 9101970 intron pum - chr3R_5_9100001 chr3R_9100001 RAL-26 1011 chr3R 9278781 9278805 chr3R 9284041 9284065 Rt1a 13 5260 0.5 8.0 4.2 2.5 5284 chr3R 9278781 intergenic not near genes chr3R 9281423 intergenic not near genes chr3R 9284065 intergenic not near genes chr3R_13_9280001 chr3R_9280001 RAL-26 1012 chr3R 9284352 9284374 chr3R 9284449 9284471 7 97 2.0 2.0 2.0 2.3 119 chr3R 9284352 intergenic not near genes chr3R 9284412 intergenic not near genes chr3R 9284471 intergenic not near genes chr3R_7_9280001 chr3R_9280001 RAL-26 1013 chr3R 9319575 9319608 chr3R 9320010 9320039 jockey 12 435 2.0 2.0 2.0 4.0 464 chr3R 9319575 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320039 intron CG8861 - chr3R_12_9315001 chr3R_9315001 RAL-26 1014 chr3R 9381481 9381503 chr3R 9381604 9381626 8 122 0.0 1.5 0.8 4.4 145 chr3R 9381481 intron FER - chr3R 9381554 intron FER - chr3R 9381626 intron FER - chr3R_8_9380001 chr3R_9380001 RAL-26 1015 chr3R 9382828 9382845 chr3R 9382951 9382970 4 124 2.5 1.0 1.8 1.4 142 chr3R 9382828 intron FER - chr3R 9382899 intron FER - chr3R 9382970 intron FER - chr3R_4_9380001 chr3R_9380001 RAL-26 1016 chr3R 9608655 9608689 chr3R 9608921 9608955 8 263 2.0 4.5 3.2 1.9 300 chr3R 9608655 intron CG8312 + chr3R 9608805 intron CG8312 + chr3R 9608955 intron CG8312 + chr3R_8_9605001 chr3R_9605001 RAL-26 1017 chr3R 9699975 9700002 chr3R 9700064 9700091 1360 4 89 1.5 3.0 2.2 1.2 116 chr3R 9699975 intron Unc-115a - chr3R 9700033 intron Unc-115a - chr3R 9700091 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-26 1018 chr3R 9859997 9860001 chr3R 9860111 9860115 4 114 2.0 2.5 2.2 1.2 118 chr3R 9859997 intron Teh1 - chr3R 9860056 intron Teh1 - chr3R 9860115 intron Teh1 - chr3R_4_9860001 chr3R_9860001 RAL-26 1019 chr3R 9891465 9891490 chr3R 9891605 9891630 4 140 1.0 1.0 1.0 2.0 165 chr3R 9891465 intron Glut4EF + chr3R 9891548 intron Glut4EF + chr3R 9891630 intron Glut4EF + chr3R_4_9890001 chr3R_9890001 RAL-26 1020 chr3R 9898788 9898817 chr3R 9898880 9898909 5 92 2.0 1.0 1.5 2.0 121 chr3R 9898788 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898909 intron Glut4EF + chr3R_5_9895001 chr3R_9895001 RAL-26 1021 chr3R 9936879 9936912 chr3R 9936955 9936988 5 76 2.5 3.0 2.8 1.3 109 chr3R 9936879 intron Glut4EF + chr3R 9936934 intron Glut4EF + chr3R 9936988 intron Glut4EF + chr3R_5_9935001 chr3R_9935001 RAL-26 1022 chr3R 9937597 9937611 chr3R 9937677 9937686 5 79 6.5 4.0 5.2 0.8 89 chr3R 9937597 intron Glut4EF + chr3R 9937642 intron Glut4EF + chr3R 9937686 intron Glut4EF + chr3R_5_9935001 chr3R_9935001 RAL-26 1023 chr3R 9967492 9967522 chr3R 9967587 9967617 10 92 2.0 2.0 2.0 3.3 125 chr3R 9967492 intron Glut4EF + chr3R 9967554 intron Glut4EF + chr3R 9967617 intron Glut4EF + chr3R_10_9965001 chr3R_9965001 RAL-26 1024 chr3R 9996304 9996330 chr3R 9996642 9996668 9 337 3.5 2.0 2.8 2.4 364 chr3R 9996304 exon Gr85a - chr3R 9996486 exon Gr85a - chr3R 9996668 exon Gr85a - chr3R_9_9995001 chr3R_9995001 RAL-26 1025 chr3R 9998829 9998851 chr3R 10003931 10003953 4 5102 19.5 5.5 12.5 0.3 5124 chr3R 9998829 exon Spn85F + chr3R 10001391 intergenic CG5359 -,Mical - chr3R 10003953 intron Mical - chr3R_4_10000001 chr3R_10000001 RAL-26 1026 chr3R 10073772 10073801 chr3R 10073881 10073910 6 108 0.5 1.5 1.0 3.0 138 chr3R 10073772 intergenic nerfin-2 +,CG5361 - chr3R 10073841 3` UTR CG5361 - chr3R 10073910 exon CG5361 - chr3R_6_10070001 chr3R_10070001 RAL-26 1027 chr3R 10231789 10231813 chr3R 10237366 10237390 mdg3 7 5577 0.0 1.5 0.8 3.9 5601 chr3R 10231789 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237390 intron CG42795 + chr3R_7_10230001 chr3R_10230001 RAL-26 1028 chr3R 10277131 10277159 chr3R 10277211 10277239 5 80 0.5 2.0 1.2 2.3 108 chr3R 10277131 intron CG43143 + chr3R 10277185 intron CG43143 + chr3R 10277239 intron CG43143 + chr3R_5_10275001 chr3R_10275001 RAL-26 1029 chr3R 10308364 10308394 chr3R 10308450 10308480 6 86 2.5 1.0 1.8 2.1 116 chr3R 10308364 3` UTR,3` UTR CG43143 +,CG6293 - chr3R 10308422 3` UTR,3` UTR CG43143 +,CG6293 - chr3R 10308480 3` UTR CG6293 - chr3R_6_10305001 chr3R_10305001 RAL-26 1030 chr3R 10401898 10401908 chr3R 10402088 10402098 5 190 5.5 2.5 4.0 1.0 200 chr3R 10401898 exon mthl11 + chr3R 10401998 intron mthl11 + chr3R 10402098 exon mthl11 + chr3R_5_10400001 chr3R_10400001 RAL-26 1031 chr3R 10424144 10424175 chr3R 10424224 10424254 10 79 1.0 3.0 2.0 3.3 110 chr3R 10424144 intergenic not near genes chr3R 10424199 intergenic not near genes chr3R 10424254 intergenic not near genes chr3R_10_10420001 chr3R_10420001 RAL-26 1032 chr3R 10531866 10531886 chr3R 10531947 10531967 6 81 2.0 0.5 1.2 2.7 101 chr3R 10531866 intron hth - chr3R 10531916 intron hth - chr3R 10531967 intron hth - chr3R_6_10530001 chr3R_10530001 RAL-26 1033 chr3R 10868590 10868615 chr3R 10868668 10868693 8 78 5.0 0.5 2.8 2.1 103 chr3R 10868590 5` UTR SelR - chr3R 10868642 5` UTR SelR - chr3R 10868693 intergenic Tsp86D +,SelR - chr3R_8_10865001 chr3R_10865001 RAL-26 1034 chr3R 10919683 10919711 chr3R 10919761 10919789 9 77 2.0 0.5 1.2 4.1 106 chr3R 10919683 intergenic not near genes chr3R 10919736 intergenic not near genes chr3R 10919789 intergenic not near genes chr3R_9_10915001 chr3R_10915001 RAL-26 1035 chr3R 11048576 11048605 chr3R 11048660 11048689 4 84 0.0 0.0 0.0 4.0 113 chr3R 11048576 3` UTR CG34114 + chr3R 11048632 3` UTR CG34114 + chr3R 11048689 3` UTR CG34114 + chr3R_4_11045001 chr3R_11045001 RAL-26 1036 chr3R 11085460 11085483 chr3R 11085537 11085560 7 77 0.0 1.5 0.8 3.9 100 chr3R 11085460 3` UTR CR44940 - chr3R 11085510 intergenic CR44940 - chr3R 11085560 intergenic CR44940 - chr3R_7_11085001 chr3R_11085001 RAL-26 1037 chr3R 11102324 11102352 chr3R 11102405 11102426 7 80 3.0 1.5 2.2 2.2 102 chr3R 11102324 intergenic not near genes chr3R 11102375 intergenic not near genes chr3R 11102426 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-26 1038 chr3R 11197984 11198018 chr3R 11198083 11198107 4 96 2.0 2.5 2.2 1.2 123 chr3R 11197984 intron cu + chr3R 11198046 intron cu + chr3R 11198107 intron cu + chr3R_4_11195001 chr3R_11195001 RAL-26 1039 chr3R 11242264 11242281 chr3R 11242353 11242370 4 89 1.0 5.5 3.2 1.0 106 chr3R 11242264 3` UTR CG17734 - chr3R 11242317 3` UTR CG17734 - chr3R 11242370 3` UTR CG17734 - chr3R_4_11240001 chr3R_11240001 RAL-26 1040 chr3R 11404946 11404972 chr3R 11405026 11405052 11 80 1.0 1.0 1.0 5.5 106 chr3R 11404946 3` UTR pros + chr3R 11404999 3` UTR pros + chr3R 11405052 3` UTR pros + chr3R_11_11400001 chr3R_11400001 RAL-26 1041 chr3R 11408755 11408774 chr3R 11408849 11408868 6 94 5.5 2.0 3.8 1.2 113 chr3R 11408755 3` UTR mRpL40 + chr3R 11408812 3` UTR mgr - chr3R 11408868 3` UTR mgr - chr3R_6_11405001 chr3R_11405001 RAL-26 1042 chr3R 11565649 11565656 chr3R 11565730 11565737 4 81 7.5 4.5 6.0 0.6 88 chr3R 11565649 intron,intron fabp -,sea - chr3R 11565693 intron,intron fabp -,sea - chr3R 11565737 intron,intron fabp -,sea - chr3R_4_11565001 chr3R_11565001 RAL-26 1043 chr3R 11565660 11565661 chr3R 11565729 11565736 4 75 6.5 4.0 5.2 0.6 76 chr3R 11565660 intron,intron fabp -,sea - chr3R 11565698 intron,intron fabp -,sea - chr3R 11565736 intron,intron fabp -,sea - chr3R_4_11565001 chr3R_11565001 RAL-26 1044 chr3R 11565662 11565678 chr3R 11565728 11565759 4 77 4.0 4.0 4.0 0.8 97 chr3R 11565662 intron,intron fabp -,sea - chr3R 11565710 intron,intron fabp -,sea - chr3R 11565759 intron,intron fabp -,sea - chr3R_4_11565001 chr3R_11565001 RAL-26 1045 chr3R 11734163 11734187 chr3R 11734282 11734305 10 119 2.5 2.5 2.5 2.9 142 chr3R 11734163 intergenic not near genes chr3R 11734234 intergenic not near genes chr3R 11734305 intergenic not near genes chr3R_10_11730001 chr3R_11730001 RAL-26 1046 chr3R 11763933 11763943 chr3R 11764010 11764023 4 79 3.0 3.5 3.2 1.0 90 chr3R 11763933 5` UTR Lk6 - chr3R 11763978 5` UTR Lk6 - chr3R 11764023 5` UTR Lk6 - chr3R_4_11760001 chr3R_11760001 RAL-26 1047 chr3R 11830351 11830355 chr3R 11830435 11830439 4 84 2.5 2.0 2.2 1.2 88 chr3R 11830351 intron CG6959 - chr3R 11830395 intron CG6959 - chr3R 11830439 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-26 1048 chr3R 11841058 11841090 chr3R 11846249 11846281 BS 11 5191 3.5 2.5 3.0 2.8 5223 chr3R 11841058 intron CG6959 - chr3R 11843670 intron CG6959 - chr3R 11846281 intron CG6959 - chr3R_11_11840001 chr3R_11840001 RAL-26 1049 chr3R 11853435 11853473 chr3R 11853584 11853620 10 148 0.5 2.5 1.5 4.0 185 chr3R 11853435 intron CG6959 - chr3R 11853528 intron CG6959 - chr3R 11853620 intron CG6959 - chr3R_10_11850001 chr3R_11850001 RAL-26 1050 chr3R 11853783 11853801 chr3R 11853888 11853906 5 105 1.5 3.0 2.2 1.6 123 chr3R 11853783 intron CG6959 - chr3R 11853844 intron CG6959 - chr3R 11853906 intron CG6959 - chr3R_5_11850001 chr3R_11850001 RAL-26 1051 chr3R 12022883 12022888 chr3R 12025060 12025065 pogo 4 2177 5.0 1.5 3.2 1.0 2182 chr3R 12022883 intergenic not near genes chr3R 12023974 intergenic not near genes chr3R 12025065 intergenic not near genes chr3R_4_12020001 chr3R_12020001 RAL-26 1052 chr3R 12080867 12080895 chr3R 12080944 12080973 6 77 3.0 2.5 2.8 1.6 106 chr3R 12080867 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12080973 intron CG14741 - chr3R_6_12080001 chr3R_12080001 RAL-26 1053 chr3R 12134878 12134909 chr3R 12135007 12135038 7 129 5.5 2.5 4.0 1.4 160 chr3R 12134878 intergenic not near genes chr3R 12134958 intergenic not near genes chr3R 12135038 intergenic not near genes chr3R_7_12130001 chr3R_12130001 RAL-26 1054 chr3R 12160259 12160280 chr3R 12160408 12160428 4 149 1.0 2.5 1.8 1.4 169 chr3R 12160259 intergenic not near genes chr3R 12160344 intergenic not near genes chr3R 12160428 intergenic not near genes chr3R_4_12160001 chr3R_12160001 RAL-26 1055 chr3R 12202289 12202319 chr3R 12202398 12202428 10 109 1.5 4.0 2.8 2.6 139 chr3R 12202289 intergenic not near genes chr3R 12202358 intergenic not near genes chr3R 12202428 intergenic not near genes chr3R_10_12200001 chr3R_12200001 RAL-26 1056 chr3R 12215014 12215042 chr3R 12215136 12215164 7 122 1.0 0.5 0.8 3.9 150 chr3R 12215014 3` UTR,intron CG4848 -,CG14742 + chr3R 12215089 3` UTR,intron CG4848 -,CG14742 + chr3R 12215164 3` UTR,intron CG4848 -,CG14742 + chr3R_7_12215001 chr3R_12215001 RAL-26 1057 chr3R 12374133 12374162 chr3R 12374582 12374606 12 447 1.5 0.0 0.8 6.7 473 chr3R 12374133 5` UTR GstD4 + chr3R 12374370 exon GstD4 + chr3R 12374606 exon GstD4 + chr3R_12_12370001 chr3R_12370001 RAL-26 1058 chr3R 12566769 12566804 chr3R 12566937 12566972 16 164 2.5 3.5 3.0 4.0 203 chr3R 12566769 intron Octbeta2R - chr3R 12566870 intron Octbeta2R - chr3R 12566972 intron Octbeta2R - chr3R_16_12565001 chr3R_12565001 RAL-26 1059 chr3R 12701982 12702016 chr3R 12702058 12702092 17 76 5.5 3.5 4.5 3.1 110 chr3R 12701982 intron Past1 + chr3R 12702037 intron Past1 + chr3R 12702092 intron Past1 + chr3R_17_12700001 chr3R_12700001 RAL-26 1060 chr3R 12763123 12763147 chr3R 12763200 12763224 7 77 0.0 0.0 0.0 7.0 101 chr3R 12763123 intron beat-Vc - chr3R 12763174 intron beat-Vc - chr3R 12763224 intron beat-Vc - chr3R_7_12760001 chr3R_12760001 RAL-26 1061 chr3R 12833531 12833546 chr3R 12833718 12833733 4 187 3.0 0.0 1.5 1.6 202 chr3R 12833531 intergenic not near genes chr3R 12833632 intergenic not near genes chr3R 12833733 intergenic not near genes chr3R_4_12830001 chr3R_12830001 RAL-26 1062 chr3R 12853147 12853160 chr3R 12853234 12853244 5 86 3.0 0.0 1.5 2.0 97 chr3R 12853147 intergenic not near genes chr3R 12853196 intergenic not near genes chr3R 12853244 intergenic not near genes chr3R_5_12850001 chr3R_12850001 RAL-26 1063 chr3R 12920153 12920179 chr3R 12925356 12925382 copia 6 5203 1.5 3.5 2.5 1.7 5229 chr3R 12920153 intron beat-Vb + chr3R 12922768 intron beat-Vb + chr3R 12925382 intron beat-Vb + chr3R_6_12920001 chr3R_12920001 RAL-26 1064 chr3R 12947530 12947565 chr3R 12947610 12947645 12 80 3.0 1.5 2.2 3.8 115 chr3R 12947530 intergenic not near genes chr3R 12947588 intergenic not near genes chr3R 12947645 intergenic not near genes chr3R_12_12945001 chr3R_12945001 RAL-26 1065 chr3R 12952282 12952293 chr3R 12952407 12952418 5 125 4.5 5.0 4.8 0.9 136 chr3R 12952282 intron grsm - chr3R 12952350 intron grsm - chr3R 12952418 intron grsm - chr3R_5_12950001 chr3R_12950001 RAL-26 1066 chr3R 12952302 12952314 chr3R 12952403 12952439 7 121 3.0 4.5 3.8 1.5 137 chr3R 12952302 intron grsm - chr3R 12952370 intron grsm - chr3R 12952439 intron grsm - chr3R_7_12950001 chr3R_12950001 RAL-26 1067 chr3R 13059966 13059974 chr3R 13060161 13060169 4 195 0.0 2.0 1.0 2.0 203 chr3R 13059966 intron sim + chr3R 13060068 intron sim + chr3R 13060169 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-26 1068 chr3R 13067099 13067132 chr3R 13067175 13067208 5 76 0.0 0.5 0.2 4.2 109 chr3R 13067099 intron sim + chr3R 13067154 intron sim + chr3R 13067208 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-26 1069 chr3R 13075360 13075380 chr3R 13075441 13075461 5 80 1.0 0.5 0.8 2.8 101 chr3R 13075360 intron sim + chr3R 13075410 intron sim + chr3R 13075461 intron sim + chr3R_5_13075001 chr3R_13075001 RAL-26 1070 chr3R 13114398 13114423 chr3R 13114492 13114510 9 93 2.0 3.0 2.5 2.6 112 chr3R 13114398 intron timeout + chr3R 13114454 intron timeout + chr3R 13114510 intron timeout + chr3R_9_13110001 chr3R_13110001 RAL-26 1071 chr3R 13143040 13143066 chr3R 13148616 13148642 mdg3 11 5574 2.0 4.0 3.0 2.8 5602 chr3R 13143040 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145841 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148642 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13145001 chr3R_13145001 RAL-26 1072 chr3R 13171905 13171935 chr3R 13172815 13172845 6 910 21.0 3.0 12.0 0.5 940 chr3R 13171905 intergenic not near genes chr3R 13172375 intergenic not near genes chr3R 13172845 intergenic not near genes chr3R_6_13170001 chr3R_13170001 RAL-26 1073 chr3R 13173442 13173470 chr3R 13173524 13173547 8 81 2.0 3.0 2.5 2.3 105 chr3R 13173442 intergenic not near genes chr3R 13173494 intergenic not near genes chr3R 13173547 intergenic not near genes chr3R_8_13170001 chr3R_13170001 RAL-26 1074 chr3R 13195957 13195983 chr3R 13196051 13196078 11 95 3.0 2.0 2.5 3.1 121 chr3R 13195957 intergenic not near genes chr3R 13196018 intergenic not near genes chr3R 13196078 intergenic not near genes chr3R_11_13195001 chr3R_13195001 RAL-26 1075 chr3R 13248653 13248674 chr3R 13248752 13248773 4 99 1.0 1.5 1.2 1.8 120 chr3R 13248653 intron Ace - chr3R 13248713 intron Ace - chr3R 13248773 intron Ace - chr3R_4_13245001 chr3R_13245001 RAL-26 1076 chr3R 13260726 13260748 chr3R 13260857 13260881 7 131 2.5 2.0 2.2 2.2 155 chr3R 13260726 intron CG11686 + chr3R 13260804 intron CG11686 + chr3R 13260881 intron CG11686 + chr3R_7_13260001 chr3R_13260001 RAL-26 1077 chr3R 13274216 13274246 chr3R 13274295 13274325 7 79 0.0 3.5 1.8 2.5 109 chr3R 13274216 intergenic not near genes chr3R 13274270 intergenic not near genes chr3R 13274325 intergenic not near genes chr3R_7_13270001 chr3R_13270001 RAL-26 1078 chr3R 13305666 13305692 chr3R 13305753 13305778 5 87 0.5 3.5 2.0 1.7 112 chr3R 13305666 intron CG32473 + chr3R 13305722 intron CG32473 + chr3R 13305778 intron CG32473 + chr3R_5_13305001 chr3R_13305001 RAL-26 1079 chr3R 13306121 13306152 chr3R 13306508 13306539 9 386 1.5 0.5 1.0 4.5 418 chr3R 13306121 intron CG32473 + chr3R 13306330 intron CG32473 + chr3R 13306539 intron CG32473 + chr3R_9_13305001 chr3R_13305001 RAL-26 1080 chr3R 13323957 13323981 chr3R 13324068 13324092 8 110 3.0 2.0 2.5 2.3 135 chr3R 13323957 intergenic not near genes chr3R 13324024 intergenic not near genes chr3R 13324092 intergenic not near genes chr3R_8_13320001 chr3R_13320001 RAL-26 1081 chr3R 13326933 13326962 chr3R 13327028 13327057 12 94 1.0 1.5 1.2 5.5 124 chr3R 13326933 intergenic not near genes chr3R 13326995 intergenic not near genes chr3R 13327057 intergenic not near genes chr3R_12_13325001 chr3R_13325001 RAL-26 1082 chr3R 13356097 13356123 chr3R 13356182 13356208 8 85 1.0 4.5 2.8 2.1 111 chr3R 13356097 intergenic not near genes chr3R 13356152 intergenic not near genes chr3R 13356208 intergenic not near genes chr3R_8_13355001 chr3R_13355001 RAL-26 1083 chr3R 13391635 13391664 chr3R 13391713 13391742 9 78 3.0 3.5 3.2 2.1 107 chr3R 13391635 intron CCHa2 - chr3R 13391688 intron CCHa2 - chr3R 13391742 intron CCHa2 - chr3R_9_13390001 chr3R_13390001 RAL-26 1084 chr3R 13554143 13554175 chr3R 13554222 13554254 4 79 5.5 6.5 6.0 0.6 111 chr3R 13554143 intergenic not near genes chr3R 13554198 intergenic not near genes chr3R 13554254 intergenic not near genes chr3R_4_13550001 chr3R_13550001 RAL-26 1085 chr3R 13603056 13603077 chr3R 13603147 13603168 8 90 1.0 1.0 1.0 4.0 112 chr3R 13603056 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603168 intergenic not near genes chr3R_8_13600001 chr3R_13600001 RAL-26 1086 chr3R 13668268 13668302 chr3R 13668348 13668382 8 79 2.0 4.0 3.0 2.0 114 chr3R 13668268 3` UTR Task6 - chr3R 13668325 3` UTR Task6 - chr3R 13668382 3` UTR Task6 - chr3R_8_13665001 chr3R_13665001 RAL-26 1087 chr3R 13672950 13672973 chr3R 13673027 13673051 4 78 1.0 1.5 1.2 1.8 101 chr3R 13672950 intron Task6 - chr3R 13673000 intron Task6 - chr3R 13673051 intron Task6 - chr3R_4_13670001 chr3R_13670001 RAL-26 1088 chr3R 13693027 13693028 chr3R 21907534 21907535 5 8214507 3.5 19.0 11.2 0.4 8214508 chr3R 13693027 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_5_17800001 chr3R_17800001 RAL-26 1089 chr3R 13719950 13719973 chr3R 13720409 13720432 11 459 2.5 2.5 2.5 3.1 482 chr3R 13719950 intron CG34383 + chr3R 13720191 intron CG34383 + chr3R 13720432 intron CG34383 + chr3R_11_13720001 chr3R_13720001 RAL-26 1090 chr3R 13736059 13736083 chr3R 13736149 13736150 4 84 1.5 1.5 1.5 1.6 91 chr3R 13736059 intron CG34383 + chr3R 13736104 intron CG34383 + chr3R 13736150 intron CG34383 + chr3R_4_13735001 chr3R_13735001 RAL-26 1091 chr3R 13830189 13830209 chr3R 13830279 13830301 9 92 3.0 1.5 2.2 2.8 112 chr3R 13830189 intergenic not near genes chr3R 13830245 intergenic not near genes chr3R 13830301 intergenic not near genes chr3R_9_13830001 chr3R_13830001 RAL-26 1092 chr3R 13915685 13915714 chr3R 13916027 13916056 9 342 4.0 4.0 4.0 1.8 371 chr3R 13915685 intergenic not near genes chr3R 13915870 intergenic not near genes chr3R 13916056 intergenic not near genes chr3R_9_13915001 chr3R_13915001 RAL-26 1093 chr3R 13916308 13916341 chr3R 13916393 13916426 14 84 4.0 3.0 3.5 3.1 118 chr3R 13916308 intergenic not near genes chr3R 13916367 intergenic not near genes chr3R 13916426 intergenic not near genes chr3R_14_13915001 chr3R_13915001 RAL-26 1094 chr3R 13949248 13949253 chr3R 13949326 13949331 6 78 0.0 6.0 3.0 1.5 83 chr3R 13949248 3` UTR CG31517 + chr3R 13949290 3` UTR CG31517 + chr3R 13949331 intron CG31517 + chr3R_6_13945001 chr3R_13945001 RAL-26 1095 chr3R 13958567 13958574 chr3R 13958663 13958670 7 96 3.0 2.5 2.8 1.8 103 chr3R 13958567 intergenic Ipp + chr3R 13958618 intergenic Ipp + chr3R 13958670 intergenic Ipp + chr3R_7_13955001 chr3R_13955001 RAL-26 1096 chr3R 14062840 14062873 chr3R 14062917 14062950 6 77 1.5 2.5 2.0 2.0 110 chr3R 14062840 intron foxo + chr3R 14062895 intron foxo + chr3R 14062950 intron foxo + chr3R_6_14060001 chr3R_14060001 RAL-26 1097 chr3R 14166682 14166700 chr3R 14167326 14167345 4 645 3.5 3.0 3.2 1.0 663 chr3R 14166682 3` UTR Dop1R1 - chr3R 14167014 3` UTR Dop1R1 - chr3R 14167345 3` UTR Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-26 1098 chr3R 14174954 14174993 chr3R 14175041 14175080 15 86 2.0 2.0 2.0 5.0 126 chr3R 14174954 3` UTR Dop1R1 - chr3R 14175017 3` UTR Dop1R1 - chr3R 14175080 3` UTR Dop1R1 - chr3R_15_14175001 chr3R_14175001 RAL-26 1099 chr3R 14246395 14246409 chr3R 14247891 14247905 jockey 5 1496 6.0 3.5 4.8 0.9 1510 chr3R 14246395 intergenic not near genes chr3R 14247150 intergenic not near genes chr3R 14247905 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-26 1100 chr3R 14258191 14258209 chr3R 14258271 14258289 5 79 0.5 5.0 2.8 1.3 98 chr3R 14258191 intron Aats-met - chr3R 14258240 intron Aats-met - chr3R 14258289 intron Aats-met - chr3R_5_14255001 chr3R_14255001 RAL-26 1101 chr3R 14311665 14311677 chr3R 14311743 14311755 5 78 3.5 1.0 2.2 1.6 90 chr3R 14311665 intron CG31321 + chr3R 14311710 intron CG31321 + chr3R 14311755 intron CG31321 + chr3R_5_14310001 chr3R_14310001 RAL-26 1102 chr3R 14327690 14327726 chr3R 14327772 14327808 7 82 4.5 1.5 3.0 1.8 118 chr3R 14327690 3` UTR CG3321 + chr3R 14327749 intergenic CG3321 +,spn-B + chr3R 14327808 intergenic CG3321 +,spn-B + chr3R_7_14325001 chr3R_14325001 RAL-26 1103 chr3R 14364069 14364090 chr3R 14364146 14364167 7 77 4.0 3.5 3.8 1.5 98 chr3R 14364069 intron NK7.1 - chr3R 14364118 intron NK7.1 - chr3R 14364167 intron NK7.1 - chr3R_7_14360001 chr3R_14360001 RAL-26 1104 chr3R 14662316 14662338 chr3R 14662397 14662419 8 81 2.5 2.0 2.2 2.5 103 chr3R 14662316 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662419 exon Rad17 - chr3R_8_14660001 chr3R_14660001 RAL-26 1105 chr3R 14704395 14704417 chr3R 14704472 14704483 8 76 2.0 2.0 2.0 2.7 88 chr3R 14704395 intron kibra - chr3R 14704439 intron kibra - chr3R 14704483 intron kibra - chr3R_8_14700001 chr3R_14700001 RAL-26 1106 chr3R 14832256 14832282 chr3R 14832414 14832440 5 158 3.0 3.5 3.2 1.2 184 chr3R 14832256 intron btsz - chr3R 14832348 intron btsz - chr3R 14832440 intron btsz - chr3R_5_14830001 chr3R_14830001 RAL-26 1107 chr3R 14833589 14833607 chr3R 14833691 14833709 6 102 1.0 3.0 2.0 2.0 120 chr3R 14833589 intron btsz - chr3R 14833649 intron btsz - chr3R 14833709 intron btsz - chr3R_6_14830001 chr3R_14830001 RAL-26 1108 chr3R 14898478 14898503 chr3R 14898598 14898623 7 118 1.5 0.5 1.0 3.5 145 chr3R 14898478 intergenic Nup93-2 -,CG3817 + chr3R 14898550 intergenic Nup93-2 -,CG3817 + chr3R 14898623 intergenic CG3817 +,Nup93-2 - chr3R_7_14895001 chr3R_14895001 RAL-26 1109 chr3R 14911565 14911598 chr3R 14911671 14911704 9 104 1.0 1.0 1.0 4.5 139 chr3R 14911565 intergenic not near genes chr3R 14911634 intergenic not near genes chr3R 14911704 intergenic not near genes chr3R_9_14910001 chr3R_14910001 RAL-26 1110 chr3R 15078340 15078374 chr3R 15078420 15078454 8 79 0.5 2.0 1.2 3.6 114 chr3R 15078340 intergenic CG6974 - chr3R 15078397 intergenic CG6974 - chr3R 15078454 intergenic CG6974 - chr3R_8_15075001 chr3R_15075001 RAL-26 1111 chr3R 15088072 15088103 chr3R 15088170 15088201 4 98 4.0 0.0 2.0 1.3 129 chr3R 15088072 intron CG6966 - chr3R 15088136 intron CG6966 - chr3R 15088201 intron CG6966 - chr3R_4_15085001 chr3R_15085001 RAL-26 1112 chr3R 15155774 15155803 chr3R 15156086 15156097 6 309 2.5 3.0 2.8 1.6 323 chr3R 15155774 intron Gyc88E + chr3R 15155936 intron Gyc88E + chr3R 15156097 intron Gyc88E + chr3R_6_15155001 chr3R_15155001 RAL-26 1113 chr3R 15284725 15284758 chr3R 15284808 15284839 11 83 0.5 2.0 1.2 5.0 114 chr3R 15284725 exon Tm1 + chr3R 15284782 intron Tm1 + chr3R 15284839 intron Tm1 + chr3R_11_15280001 chr3R_15280001 RAL-26 1114 chr3R 15407883 15407903 chr3R 15408099 15408119 4 216 2.0 4.5 3.2 1.0 236 chr3R 15407883 intergenic not near genes chr3R 15408001 intergenic not near genes chr3R 15408119 intergenic not near genes chr3R_4_15405001 chr3R_15405001 RAL-26 1115 chr3R 15517599 15517623 chr3R 15517682 15517706 4 83 2.0 1.0 1.5 1.6 107 chr3R 15517599 intergenic not near genes chr3R 15517652 intergenic not near genes chr3R 15517706 intergenic not near genes chr3R_4_15515001 chr3R_15515001 RAL-26 1116 chr3R 15570146 15570160 chr3R 15570236 15570250 6 88 4.0 0.0 2.0 2.0 104 chr3R 15570146 intergenic not near genes chr3R 15570198 intergenic not near genes chr3R 15570250 intergenic not near genes chr3R_6_15570001 chr3R_15570001 RAL-26 1117 chr3R 15601163 15601187 chr3R 15608685 15608709 412 7 7522 4.0 0.0 2.0 2.3 7546 chr3R 15601163 intergenic not near genes chr3R 15604936 intergenic not near genes chr3R 15608709 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-26 1118 chr3R 15618745 15618762 chr3R 15626219 15626236 blood 7 7473 0.5 4.0 2.2 2.2 7491 chr3R 15618745 intergenic not near genes chr3R 15622490 intergenic not near genes chr3R 15626236 intergenic not near genes chr3R_7_15620001 chr3R_15620001 RAL-26 1119 chr3R 15637867 15637899 chr3R 15637949 15637981 14 79 3.5 4.5 4.0 2.8 114 chr3R 15637867 exon CG43336 + chr3R 15637924 exon CG43336 + chr3R 15637981 exon CG43336 + chr3R_14_15635001 chr3R_15635001 RAL-26 1120 chr3R 15937425 15937435 chr3R 15937507 15937522 7 85 2.0 4.0 3.0 1.8 97 chr3R 15937425 intron Sap47 + chr3R 15937474 intron Sap47 + chr3R 15937522 intron Sap47 + chr3R_7_15935001 chr3R_15935001 RAL-26 1121 chr3R 16023862 16023890 chr3R 16023939 16023967 13 77 0.5 1.5 1.0 6.5 105 chr3R 16023862 intergenic not near genes chr3R 16023914 intergenic not near genes chr3R 16023967 intergenic not near genes chr3R_13_16020001 chr3R_16020001 RAL-26 1122 chr3R 16048852 16048883 chr3R 16048942 16048968 7 89 1.5 1.5 1.5 2.8 116 chr3R 16048852 intron ird5 - chr3R 16048910 intron ird5 - chr3R 16048968 intron ird5 - chr3R_7_16045001 chr3R_16045001 RAL-26 1123 chr3R 16275583 16275611 chr3R 16275898 16275926 10 314 0.5 1.5 1.0 5.0 343 chr3R 16275583 intron gish + chr3R 16275754 intron gish + chr3R 16275926 intron gish + chr3R_10_16275001 chr3R_16275001 RAL-26 1124 chr3R 16320135 16320152 chr3R 16320284 16320301 4 149 4.0 2.5 3.2 1.0 166 chr3R 16320135 intron Sulf1 - chr3R 16320218 intron Sulf1 - chr3R 16320301 intron Sulf1 - chr3R_4_16320001 chr3R_16320001 RAL-26 1125 chr3R 16594752 16594779 chr3R 16594830 16594857 8 78 5.5 4.5 5.0 1.3 105 chr3R 16594752 5` UTR CG14892 + chr3R 16594804 5` UTR CG14892 + chr3R 16594857 5` UTR CG14892 + chr3R_8_16590001 chr3R_16590001 RAL-26 1126 chr3R 16671509 16671534 chr3R 16671591 16671620 5 85 2.0 2.5 2.2 1.6 111 chr3R 16671509 intron Ubx - chr3R 16671564 intron Ubx - chr3R 16671620 intron Ubx - chr3R_5_16670001 chr3R_16670001 RAL-26 1127 chr3R 16756317 16756344 chr3R 16762508 16762531 diver 4 6190 4.0 0.5 2.2 1.2 6214 chr3R 16756317 intron bxd - chr3R 16759424 intron bxd - chr3R 16762531 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-26 1128 chr3R 16796032 16796057 chr3R 16796568 16796591 7 534 4.0 5.5 4.8 1.2 559 chr3R 16796032 intergenic not near genes chr3R 16796312 intergenic not near genes chr3R 16796591 intergenic not near genes chr3R_7_16795001 chr3R_16795001 RAL-26 1129 chr3R 17219294 17219304 chr3R 17219384 17219394 4 90 0.0 0.0 0.0 4.0 100 chr3R 17219294 intron CG31262 - chr3R 17219344 exon CG31262 - chr3R 17219394 exon CG31262 - chr3R_4_17215001 chr3R_17215001 RAL-26 1130 chr3R 17221269 17221299 chr3R 17221372 17221402 5 102 4.0 4.5 4.2 1.0 133 chr3R 17221269 intron CG31262 - chr3R 17221336 intron CG31262 - chr3R 17221402 intron CG31262 - chr3R_5_17220001 chr3R_17220001 RAL-26 1131 chr3R 17264661 17264693 chr3R 17264740 17264772 10 79 4.5 1.5 3.0 2.5 111 chr3R 17264661 intron beat-IIb - chr3R 17264716 intron beat-IIb - chr3R 17264772 intron beat-IIb - chr3R_10_17260001 chr3R_17260001 RAL-26 1132 chr3R 17268679 17268702 chr3R 17268801 17268824 5 122 1.0 2.5 1.8 1.8 145 chr3R 17268679 intergenic not near genes chr3R 17268752 intergenic not near genes chr3R 17268824 intergenic not near genes chr3R_5_17265001 chr3R_17265001 RAL-26 1133 chr3R 17283000 17283026 chr3R 17283084 17283110 7 82 0.5 4.5 2.5 2.0 110 chr3R 17283000 intergenic not near genes chr3R 17283055 intergenic not near genes chr3R 17283110 intergenic not near genes chr3R_7_17280001 chr3R_17280001 RAL-26 1134 chr3R 17294660 17294681 chr3R 17295088 17295109 BS 5 428 4.0 0.0 2.0 1.7 449 chr3R 17294660 intergenic not near genes chr3R 17294884 intergenic not near genes chr3R 17295109 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-26 1135 chr3R 17335161 17335184 chr3R 17335236 17335260 11 76 4.5 3.0 3.8 2.3 99 chr3R 17335161 intron beat-IIa - chr3R 17335210 intron beat-IIa - chr3R 17335260 intron beat-IIa - chr3R_11_17335001 chr3R_17335001 RAL-26 1136 chr3R 17389054 17389054 chr3R 21907534 21907535 4 4518480 9.0 19.0 14.0 0.3 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-26 1137 chr3R 17521576 17521590 chr3R 17521730 17521750 6 158 0.5 4.0 2.2 1.9 174 chr3R 17521576 intergenic not near genes chr3R 17521663 intergenic not near genes chr3R 17521750 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-26 1138 chr3R 17550841 17550862 chr3R 17551010 17551039 11 176 1.0 2.5 1.8 3.9 198 chr3R 17550841 intergenic not near genes chr3R 17550940 intergenic not near genes chr3R 17551039 intergenic not near genes chr3R_11_17550001 chr3R_17550001 RAL-26 1139 chr3R 17591296 17591310 chr3R 17591725 17591746 F-element 5 434 2.0 3.5 2.8 1.3 450 chr3R 17591296 intergenic not near genes chr3R 17591521 intergenic not near genes chr3R 17591746 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-26 1140 chr3R 17739185 17739198 chr3R 17739267 17739274 5 81 6.5 3.5 5.0 0.8 89 chr3R 17739185 intron TyrRII + chr3R 17739230 intron TyrRII + chr3R 17739274 intron TyrRII + chr3R_5_17735001 chr3R_17735001 RAL-26 1141 chr3R 17758818 17758828 chr3R 17758922 17758926 4 102 2.0 1.5 1.8 1.4 108 chr3R 17758818 intron TyrR - chr3R 17758872 intron TyrR - chr3R 17758926 intron TyrR - chr3R_4_17755001 chr3R_17755001 RAL-26 1142 chr3R 17823215 17823233 chr3R 17823300 17823311 4 83 2.5 2.0 2.2 1.2 96 chr3R 17823215 intron tinc + chr3R 17823263 intron tinc + chr3R 17823311 intron tinc + chr3R_4_17820001 chr3R_17820001 RAL-26 1143 chr3R 17845207 17845212 chr3R 17845284 17845289 5 77 5.0 5.0 5.0 0.8 82 chr3R 17845207 intron tinc + chr3R 17845248 intron tinc + chr3R 17845289 intron tinc + chr3R_5_17845001 chr3R_17845001 RAL-26 1144 chr3R 17858388 17858417 chr3R 17858473 17858501 6 85 1.0 0.5 0.8 3.3 113 chr3R 17858388 intron tinc + chr3R 17858444 intron tinc + chr3R 17858501 intron tinc + chr3R_6_17855001 chr3R_17855001 RAL-26 1145 chr3R 17925855 17925889 chr3R 17927321 17927356 hobo 14 1466 3.5 4.5 4.0 2.8 1501 chr3R 17925855 intron cpo + chr3R 17926606 intron cpo + chr3R 17927356 intron cpo + chr3R_14_17925001 chr3R_17925001 RAL-26 1146 chr3R 17961522 17961543 chr3R 17961678 17961680 7 153 1.5 3.5 2.5 2.0 158 chr3R 17961522 intron cpo + chr3R 17961601 intron cpo + chr3R 17961680 intron cpo + chr3R_7_17960001 chr3R_17960001 RAL-26 1147 chr3R 18032787 18032806 chr3R 18040452 18040474 opus 5 7667 0.0 1.0 0.5 3.3 7687 chr3R 18032787 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040474 intergenic not near genes chr3R_5_18035001 chr3R_18035001 RAL-26 1148 chr3R 18176748 18176766 chr3R 18182294 18182312 7 5546 8.5 30.0 19.2 0.3 5564 chr3R 18176748 intron PP2A-B' + chr3R 18179530 3` UTR,3` UTR PP2A-B' +,cdm - chr3R 18182312 exon cdm - chr3R_7_18175001 chr3R_18175001 RAL-26 1149 chr3R 18211903 18211920 chr3R 18212042 18212059 5 139 0.5 1.0 0.8 2.8 156 chr3R 18211903 intron CG7985 + chr3R 18211981 intron CG7985 + chr3R 18212059 intron CG7985 + chr3R_5_18210001 chr3R_18210001 RAL-26 1150 chr3R 18322802 18322836 chr3R 18323439 18323473 10 637 17.5 18.0 17.8 0.5 671 chr3R 18322802 intron CG31235 - chr3R 18323138 intron CG31235 - chr3R 18323473 intron CG31235 - chr3R_10_18320001 chr3R_18320001 RAL-26 1151 chr3R 18394480 18394495 chr3R 18394557 18394572 5 77 3.5 2.5 3.0 1.2 92 chr3R 18394480 intron Vha100-2 - chr3R 18394526 intron Vha100-2 - chr3R 18394572 intron Vha100-2 - chr3R_5_18390001 chr3R_18390001 RAL-26 1152 chr3R 18464326 18464339 chr3R 18464465 18464477 6 139 0.0 3.5 1.8 2.1 151 chr3R 18464326 intron fru - chr3R 18464402 intron fru - chr3R 18464477 intron fru - chr3R_6_18460001 chr3R_18460001 RAL-26 1153 chr3R 18501591 18501609 chr3R 18501672 18501690 7 81 2.5 2.0 2.2 2.2 99 chr3R 18501591 intron fru - chr3R 18501640 intron fru - chr3R 18501690 intron fru - chr3R_7_18500001 chr3R_18500001 RAL-26 1154 chr3R 18575573 18575600 chr3R 18575657 18575675 6 82 4.5 1.5 3.0 1.5 102 chr3R 18575573 intron,intron CG7694 +,fray + chr3R 18575624 intron,intron CG7694 +,fray + chr3R 18575675 intron,intron CG7694 +,fray + chr3R_6_18575001 chr3R_18575001 RAL-26 1155 chr3R 18606510 18606532 chr3R 18610742 18610764 F-element 6 4232 1.0 2.5 1.8 2.1 4254 chr3R 18606510 intron,intron qin +,CG14304 - chr3R 18608637 intron,intron qin +,CG14304 - chr3R 18610764 intron,intron qin +,CG14304 - chr3R_6_18605001 chr3R_18605001 RAL-26 1156 chr3R 18639647 18639673 chr3R 18639732 18639758 8 85 0.5 5.5 3.0 2.0 111 chr3R 18639647 intron,intron qin +,CG14301 - chr3R 18639702 intron,intron qin +,CG14301 - chr3R 18639758 intron,intron qin +,CG14301 - chr3R_8_18635001 chr3R_18635001 RAL-26 1157 chr3R 18730027 18730038 chr3R 18730103 18730114 5 76 3.5 2.0 2.8 1.3 87 chr3R 18730027 intron Cha + chr3R 18730070 intron Cha + chr3R 18730114 exon Cha + chr3R_5_18730001 chr3R_18730001 RAL-26 1158 chr3R 18781702 18781727 chr3R 18781778 18781803 7 76 0.0 4.5 2.2 2.2 101 chr3R 18781702 intron CG7720 - chr3R 18781752 intron CG7720 - chr3R 18781803 intron CG7720 - chr3R_7_18780001 chr3R_18780001 RAL-26 1159 chr3R 18791497 18791522 chr3R 18791576 18791600 6 79 0.5 1.5 1.0 3.0 103 chr3R 18791497 intron CG7720 - chr3R 18791548 intron CG7720 - chr3R 18791600 intron CG7720 - chr3R_6_18790001 chr3R_18790001 RAL-26 1160 chr3R 18808473 18808508 chr3R 18808550 18808585 7 77 2.0 2.0 2.0 2.3 112 chr3R 18808473 intron CG18208 - chr3R 18808529 intron CG18208 - chr3R 18808585 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-26 1161 chr3R 18812081 18812104 chr3R 18812159 18812176 9 77 0.5 4.0 2.2 2.8 95 chr3R 18812081 intron CG18208 - chr3R 18812128 intron CG18208 - chr3R 18812176 intron CG18208 - chr3R_9_18810001 chr3R_18810001 RAL-26 1162 chr3R 18821623 18821649 chr3R 18821698 18821725 4 76 2.0 2.5 2.2 1.2 102 chr3R 18821623 intron CG18208 - chr3R 18821674 intron CG18208 - chr3R 18821725 intron CG18208 - chr3R_4_18820001 chr3R_18820001 RAL-26 1163 chr3R 18833652 18833669 chr3R 18833719 18833719 6 70 2.0 2.0 2.0 2.0 67 chr3R 18833652 intron CG18208 - chr3R 18833686 intron CG18208 - chr3R 18833719 intron CG18208 - chr3R_6_18830001 chr3R_18830001 RAL-26 1164 chr3R 18860126 18860157 chr3R 18860212 18860236 6 85 4.0 1.5 2.8 1.6 110 chr3R 18860126 intergenic not near genes chr3R 18860181 intergenic not near genes chr3R 18860236 intergenic not near genes chr3R_6_18860001 chr3R_18860001 RAL-26 1165 chr3R 18885932 18885964 chr3R 18886013 18886045 8 79 1.5 0.0 0.8 4.4 113 chr3R 18885932 intergenic not near genes chr3R 18885988 intergenic not near genes chr3R 18886045 intergenic not near genes chr3R_8_18885001 chr3R_18885001 RAL-26 1166 chr3R 18966987 18967017 chr3R 18967089 18967115 9 102 3.5 5.0 4.2 1.7 128 chr3R 18966987 intron,intron CG42613 +,CG43732 + chr3R 18967051 intron,intron CG42613 +,CG43732 + chr3R 18967115 intron,intron CG42613 +,CG43732 + chr3R_9_18965001 chr3R_18965001 RAL-26 1167 chr3R 19079569 19079605 chr3R 19079654 19079690 10 82 2.0 4.0 3.0 2.5 121 chr3R 19079569 intron cdi - chr3R 19079630 intron cdi - chr3R 19079690 intron cdi - chr3R_10_19075001 chr3R_19075001 RAL-26 1168 chr3R 19109221 19109251 chr3R 19109333 19109363 11 110 4.0 1.0 2.5 3.1 142 chr3R 19109221 intron CG6040 + chr3R 19109292 intron CG6040 + chr3R 19109363 intron CG6040 + chr3R_11_19105001 chr3R_19105001 RAL-26 1169 chr3R 19248637 19248664 chr3R 19248748 19248775 5 111 1.5 0.5 1.0 2.5 138 chr3R 19248637 intergenic not near genes chr3R 19248706 intergenic not near genes chr3R 19248775 intergenic not near genes chr3R_5_19245001 chr3R_19245001 RAL-26 1170 chr3R 19340396 19340427 chr3R 19340473 19340499 6 76 1.0 1.0 1.0 3.0 103 chr3R 19340396 intergenic not near genes chr3R 19340448 intergenic not near genes chr3R 19340499 intergenic not near genes chr3R_6_19340001 chr3R_19340001 RAL-26 1171 chr3R 11726948 11726973 chr3R 19446345 19446370 7 7719398 12.5 0.0 6.2 1.0 7719422 chr3R 11726948 intron CG12594 + chr3R 15586659 intergenic not near genes chr3R 19446370 intron CG31221 + chr3R_7_15585001 chr3R_15585001 RAL-26 1172 chr3R 19457915 19457915 chr3R 21907535 21907536 5 2449621 1.5 19.0 10.2 0.4 2449621 chr3R 19457915 3` UTR CG31221 + chr3R 20682726 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_20680001 chr3R_20680001 RAL-26 1173 chr3R 19505945 19505968 chr3R 19506044 19506067 6 99 3.0 1.5 2.2 1.9 122 chr3R 19505945 intron Dys + chr3R 19506006 intron Dys + chr3R 19506067 intron Dys + chr3R_6_19505001 chr3R_19505001 RAL-26 1174 chr3R 19678487 19678516 chr3R 19678579 19678608 9 92 1.0 2.5 1.8 3.2 121 chr3R 19678487 intron Naam + chr3R 19678548 intron Naam + chr3R 19678608 intron Naam + chr3R_9_19675001 chr3R_19675001 RAL-26 1175 chr3R 19702326 19702354 chr3R 19702407 19702436 9 81 1.0 3.5 2.2 2.8 110 chr3R 19702326 intergenic not near genes chr3R 19702381 intergenic not near genes chr3R 19702436 intergenic not near genes chr3R_9_19700001 chr3R_19700001 RAL-26 1176 chr3R 19945969 19946002 chr3R 19946072 19946105 9 103 0.0 1.5 0.8 5.0 136 chr3R 19945969 intron Hs6st - chr3R 19946037 intron Hs6st - chr3R 19946105 intron Hs6st - chr3R_9_19945001 chr3R_19945001 RAL-26 1177 chr3R 19957274 19957299 chr3R 19957350 19957375 13 76 4.0 6.0 5.0 2.2 101 chr3R 19957274 intron Hs6st - chr3R 19957324 intron Hs6st - chr3R 19957375 intron Hs6st - chr3R_13_19955001 chr3R_19955001 RAL-26 1178 chr3R 19989846 19989879 chr3R 19989926 19989959 12 79 2.5 3.0 2.8 3.2 113 chr3R 19989846 intron Hs6st - chr3R 19989902 intron Hs6st - chr3R 19989959 intron Hs6st - chr3R_12_19985001 chr3R_19985001 RAL-26 1179 chr3R 20008833 20008854 chr3R 20008901 20008935 7 77 0.5 1.0 0.8 3.9 102 chr3R 20008833 intergenic MED25 +,Hs6st - chr3R 20008884 intergenic MED25 +,Hs6st - chr3R 20008935 intergenic MED25 +,Hs6st - chr3R_7_20005001 chr3R_20005001 RAL-26 1180 chr3R 20059485 20059492 chr3R 20059565 20059572 4 79 1.5 4.5 3.0 1.0 87 chr3R 20059485 intron CG4390 - chr3R 20059528 intron CG4390 - chr3R 20059572 exon CG4390 - chr3R_4_20055001 chr3R_20055001 RAL-26 1181 chr3R 20077036 20077071 chr3R 20077122 20077157 6 86 1.0 0.5 0.8 3.3 121 chr3R 20077036 intergenic not near genes chr3R 20077096 intergenic not near genes chr3R 20077157 intergenic not near genes chr3R_6_20075001 chr3R_20075001 RAL-26 1182 chr3R 20156695 20156724 chr3R 20165865 20165894 roo 4 9170 2.5 4.0 3.2 1.0 9199 chr3R 20156695 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165894 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-26 1183 chr3R 20205410 20205595 chr3R 20205527 20205717 12 118 1.0 1.0 1.0 6.0 307 chr3R 20205410 intron Nlg4 + chr3R 20205564 intron Nlg4 + chr3R 20205717 intron Nlg4 + chr3R_12_20205001 chr3R_20205001 RAL-26 1184 chr3R 20266524 20266541 chr3R 20272995 20273012 Burdock 6 6471 3.0 1.5 2.2 1.9 6488 chr3R 20266524 intron cic + chr3R 20269768 intron cic + chr3R 20273012 intron cic + chr3R_6_20265001 chr3R_20265001 RAL-26 1185 chr3R 20365757 20365772 chr3R 20365838 20365853 5 81 5.0 2.0 3.5 1.1 96 chr3R 20365757 intergenic not near genes chr3R 20365805 intergenic not near genes chr3R 20365853 intergenic not near genes chr3R_5_20365001 chr3R_20365001 RAL-26 1186 chr3R 20453648 20453666 chr3R 20453752 20453770 8 104 2.5 7.5 5.0 1.3 122 chr3R 20453648 intron Gfrl - chr3R 20453709 intron Gfrl - chr3R 20453770 intron Gfrl - chr3R_8_20450001 chr3R_20450001 RAL-26 1187 chr3R 20545979 20545996 chr3R 20546064 20546081 6 85 2.5 3.0 2.8 1.6 102 chr3R 20545979 intron Stat92E - chr3R 20546030 intron Stat92E - chr3R 20546081 intron Stat92E - chr3R_6_20545001 chr3R_20545001 RAL-26 1188 chr3R 20663707 20663734 chr3R 20663811 20663838 12 104 5.0 4.0 4.5 2.2 131 chr3R 20663707 intergenic not near genes chr3R 20663772 intergenic not near genes chr3R 20663838 intergenic not near genes chr3R_12_20660001 chr3R_20660001 RAL-26 1189 chr3R 20686964 20686987 chr3R 20687399 20687422 6 435 0.5 1.0 0.8 3.3 458 chr3R 20686964 intergenic not near genes chr3R 20687193 intergenic not near genes chr3R 20687422 intergenic not near genes chr3R_6_20685001 chr3R_20685001 RAL-26 1190 chr3R 20707745 20707768 chr3R 20707960 20707983 4 215 1.5 0.5 1.0 2.0 238 chr3R 20707745 intron Oamb - chr3R 20707864 intron Oamb - chr3R 20707983 intron Oamb - chr3R_4_20705001 chr3R_20705001 RAL-26 1191 chr3R 20760080 20760108 chr3R 20760161 20760189 10 79 2.5 6.0 4.2 1.9 109 chr3R 20760080 intron,intron Syp +,CG31195 - chr3R 20760134 intron,intron Syp +,CG31195 - chr3R 20760189 intron,intron Syp +,CG31195 - chr3R_10_20760001 chr3R_20760001 RAL-26 1192 chr3R 20767506 20767538 chr3R 20767597 20767634 7 92 4.0 3.5 3.8 1.5 128 chr3R 20767506 intron Syp + chr3R 20767570 intron Syp + chr3R 20767634 intron Syp + chr3R_7_20765001 chr3R_20765001 RAL-26 1193 chr3R 20771703 20771730 chr3R 20771784 20771795 4 74 0.0 1.5 0.8 2.2 92 chr3R 20771703 intron,intron Syp +,Takl1 - chr3R 20771749 intron,intron Syp +,Takl1 - chr3R 20771795 intron,exon Syp +,Takl1 - chr3R_4_20770001 chr3R_20770001 RAL-26 1194 chr3R 20781700 20781710 chr3R 20781792 20781792 4 90 6.5 1.5 4.0 0.8 92 chr3R 20781700 intron Syp + chr3R 20781746 intron Syp + chr3R 20781792 intron Syp + chr3R_4_20780001 chr3R_20780001 RAL-26 1195 chr3R 20787444 20787458 chr3R 20787535 20787549 5 91 1.0 3.0 2.0 1.7 105 chr3R 20787444 intron Syp + chr3R 20787496 intron Syp + chr3R 20787549 intron Syp + chr3R_5_20785001 chr3R_20785001 RAL-26 1196 chr3R 20854507 20854518 chr3R 20859273 20859308 Doc 5 4780 2.5 1.0 1.8 1.8 4801 chr3R 20854507 intron Ir93a - chr3R 20856908 intron Ir93a - chr3R 20859308 exon Ir93a - chr3R_5_20855001 chr3R_20855001 RAL-26 1197 chr3R 20914743 20914774 chr3R 20914834 20914865 4 90 2.5 2.5 2.5 1.1 122 chr3R 20914743 intron,intron CG31191 -,hdly + chr3R 20914804 intron,intron CG31191 -,hdly + chr3R 20914865 intron,intron CG31191 -,hdly + chr3R_4_20910001 chr3R_20910001 RAL-26 1198 chr3R 20939151 20939167 chr3R 20939446 20939462 8 294 4.0 3.5 3.8 1.7 311 chr3R 20939151 intron CG31191 - chr3R 20939306 intron CG31191 - chr3R 20939462 intron CG31191 - chr3R_8_20935001 chr3R_20935001 RAL-26 1199 chr3R 21096833 21096853 chr3R 21096909 21096929 5 76 6.5 0.0 3.2 1.2 96 chr3R 21096833 intron RhoGAP93B - chr3R 21096881 intron RhoGAP93B - chr3R 21096929 intron RhoGAP93B - chr3R_5_21095001 chr3R_21095001 RAL-26 1200 chr3R 21141676 21141704 chr3R 21150157 21150185 Tirant 10 8481 6.0 4.5 5.2 1.6 8509 chr3R 21141676 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150185 intron SNF4Agamma + chr3R_10_21145001 chr3R_21145001 RAL-26 1201 chr3R 21154548 21154587 chr3R 21154753 21154802 9 212 2.0 0.0 1.0 4.5 254 chr3R 21154548 intron SNF4Agamma + chr3R 21154675 intron SNF4Agamma + chr3R 21154802 intron SNF4Agamma + chr3R_9_21150001 chr3R_21150001 RAL-26 1202 chr3R 21518258 21518272 chr3R 21518342 21518356 6 84 0.0 4.5 2.2 1.9 98 chr3R 21518258 intergenic not near genes chr3R 21518307 intergenic not near genes chr3R 21518356 intergenic not near genes chr3R_6_21515001 chr3R_21515001 RAL-26 1203 chr3R 21582999 21583009 chr3R 21583099 21583110 8 100 3.5 5.0 4.2 1.5 111 chr3R 21582999 intron InR - chr3R 21583054 intron InR - chr3R 21583110 intron InR - chr3R_8_21580001 chr3R_21580001 RAL-26 1204 chr3R 21761120 21761155 chr3R 21768509 21768546 mdg1 16 7388 2.0 3.0 2.5 4.6 7426 chr3R 21761120 exon CG42335 + chr3R 21764833 intron CG42335 + chr3R 21768546 exon CG42335 + chr3R_16_21760001 chr3R_21760001 RAL-26 1205 chr3R 8339246 8339246 chr3R 21907534 21907534 4 13568288 13.5 19.0 16.2 0.2 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-26 1206 chr3R 21907534 21907534 chr3R 28831801 28831802 10 6924268 17.5 13.0 15.2 0.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_10_25365001 chr3R_25365001 RAL-26 1207 chr3R 8339244 8339247 chr3R 21907535 21907535 4 13568289 14.0 19.0 16.5 0.2 13568291 chr3R 8339244 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-26 1208 chr3R 21907535 21907535 chr3R 28831801 28831802 19 6924266 17.5 13.0 15.2 1.2 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_19_25365001 chr3R_25365001 RAL-26 1209 chr3R 21907536 21907536 chr3R 28831801 28831802 20 6924266 17.5 13.0 15.2 1.2 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_20_25365001 chr3R_25365001 RAL-26 1210 chr3R 22055562 22055583 chr3R 22055751 22055772 4 189 1.5 2.5 2.0 1.3 210 chr3R 22055562 intron how + chr3R 22055667 intron how + chr3R 22055772 intron how + chr3R_4_22055001 chr3R_22055001 RAL-26 1211 chr3R 22153580 22153603 chr3R 22153660 22153683 4 80 4.0 5.5 4.8 0.7 103 chr3R 22153580 intron SKIP + chr3R 22153632 intron SKIP + chr3R 22153683 intron SKIP + chr3R_4_22150001 chr3R_22150001 RAL-26 1212 chr3R 22234685 22234715 chr3R 22236003 22236034 pogo 4 1319 0.5 0.5 0.5 2.7 1349 chr3R 22234685 intron SKIP + chr3R 22235360 intron SKIP + chr3R 22236034 intron SKIP + chr3R_4_22235001 chr3R_22235001 RAL-26 1213 chr3R 22331398 22331415 chr3R 22331489 22331506 5 91 1.5 3.5 2.5 1.4 108 chr3R 22331398 intron CG33721 + chr3R 22331452 exon CG33721 + chr3R 22331506 exon CG33721 + chr3R_5_22330001 chr3R_22330001 RAL-26 1214 chr3R 22450547 22450579 chr3R 22453187 22453219 NOF 9 2640 1.5 4.0 2.8 2.4 2672 chr3R 22450547 intron CG34376 + chr3R 22451883 intron CG34376 + chr3R 22453219 intron CG34376 + chr3R_9_22450001 chr3R_22450001 RAL-26 1215 chr3R 22516407 22516415 chr3R 22516500 22516504 4 92 3.5 7.0 5.2 0.6 97 chr3R 22516407 intron Octbeta1R + chr3R 22516456 intron Octbeta1R + chr3R 22516504 intron Octbeta1R + chr3R_4_22515001 chr3R_22515001 RAL-26 1216 chr3R 22516416 22516425 chr3R 22516488 22516518 6 89 1.5 5.0 3.2 1.4 102 chr3R 22516416 intron Octbeta1R + chr3R 22516467 intron Octbeta1R + chr3R 22516518 intron Octbeta1R + chr3R_6_22515001 chr3R_22515001 RAL-26 1217 chr3R 22591881 22591898 chr3R 22591974 22591991 5 93 3.5 3.0 3.2 1.2 110 chr3R 22591881 intron Efa6 + chr3R 22591936 intron Efa6 + chr3R 22591991 intron Efa6 + chr3R_5_22590001 chr3R_22590001 RAL-26 1218 chr3R 22684203 22684232 chr3R 22684279 22684308 5 76 1.5 0.5 1.0 2.5 105 chr3R 22684203 intergenic not near genes chr3R 22684256 intergenic not near genes chr3R 22684308 intergenic not near genes chr3R_5_22680001 chr3R_22680001 RAL-26 1219 chr3R 22711240 22711243 chr3R 22711316 22711319 4 76 1.0 4.5 2.8 1.1 79 chr3R 22711240 3` UTR wge - chr3R 22711280 3` UTR wge - chr3R 22711319 3` UTR wge - chr3R_4_22710001 chr3R_22710001 RAL-26 1220 chr3R 22797759 22797938 chr3R 22797845 22798034 12 89 0.0 0.0 0.0 12.0 275 chr3R 22797759 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798034 intergenic not near genes chr3R_12_22795001 chr3R_22795001 RAL-26 1221 chr3R 22840813 22840850 chr3R 22841275 22841312 9 462 1.5 2.0 1.8 3.2 499 chr3R 22840813 intergenic not near genes chr3R 22841062 intergenic not near genes chr3R 22841312 intergenic not near genes chr3R_9_22840001 chr3R_22840001 RAL-26 1222 chr3R 22993511 22993523 chr3R 22993646 22993658 6 135 3.0 3.0 3.0 1.5 147 chr3R 22993511 intron Nha2 - chr3R 22993584 intron Nha2 - chr3R 22993658 intron Nha2 - chr3R_6_22990001 chr3R_22990001 RAL-26 1223 chr3R 23064173 23064203 chr3R 23064282 23064304 14 108 3.0 2.0 2.5 4.0 131 chr3R 23064173 exon CG17111 - chr3R 23064238 intron CG17111 - chr3R 23064304 exon CG17111 - chr3R_14_23060001 chr3R_23060001 RAL-26 1224 chr3R 23073653 23073688 chr3R 23073742 23073777 10 84 3.0 1.0 2.0 3.3 124 chr3R 23073653 intron CG13830 - chr3R 23073715 intron CG13830 - chr3R 23073777 intron CG13830 - chr3R_10_23070001 chr3R_23070001 RAL-26 1225 chr3R 23079062 23079080 chr3R 23079182 23079200 7 120 2.0 3.5 2.8 1.8 138 chr3R 23079062 intron CG13830 - chr3R 23079131 intron CG13830 - chr3R 23079200 intron CG13830 - chr3R_7_23075001 chr3R_23075001 RAL-26 1226 chr3R 23086113 23086131 chr3R 23086244 23086260 4 130 2.0 3.5 2.8 1.1 147 chr3R 23086113 intron CG13830 - chr3R 23086186 intron CG13830 - chr3R 23086260 intron CG13830 - chr3R_4_23085001 chr3R_23085001 RAL-26 1227 chr3R 23100154 23100438 chr3R 23100241 23100519 13 84 6.0 3.0 4.5 2.4 365 chr3R 23100154 intron,exon CG13830 -,CG6738 + chr3R 23100336 intron,exon CG13830 -,CG6738 + chr3R 23100519 intron,exon CG13830 -,CG6738 + chr3R_13_23100001 chr3R_23100001 RAL-26 1228 chr3R 23113798 23113820 chr3R 23113871 23113891 9 76 3.0 2.0 2.5 2.6 93 chr3R 23113798 intergenic Rassf - chr3R 23113844 intergenic Rassf - chr3R 23113891 intergenic Rassf - chr3R_9_23110001 chr3R_23110001 RAL-26 1229 chr3R 23424774 23424802 chr3R 23424966 23424994 7 191 2.0 0.5 1.2 3.2 220 chr3R 23424774 intron CG4374 - chr3R 23424884 intron CG4374 - chr3R 23424994 intron CG4374 - chr3R_7_23420001 chr3R_23420001 RAL-26 1230 chr3R 23431080 23431102 chr3R 23431156 23431178 8 76 1.5 5.0 3.2 1.9 98 chr3R 23431080 intron CG4374 - chr3R 23431129 intron CG4374 - chr3R 23431178 intron CG4374 - chr3R_8_23430001 chr3R_23430001 RAL-26 1231 chr3R 23441347 23441356 chr3R 23441425 23441434 4 78 3.0 1.5 2.2 1.2 87 chr3R 23441347 intron CG4374 - chr3R 23441390 intron CG4374 - chr3R 23441434 intron CG4374 - chr3R_4_23440001 chr3R_23440001 RAL-26 1232 chr3R 23549150 23549182 chr3R 23549255 23549287 7 105 0.5 3.0 1.8 2.5 137 chr3R 23549150 intergenic not near genes chr3R 23549218 intergenic not near genes chr3R 23549287 intergenic not near genes chr3R_7_23545001 chr3R_23545001 RAL-26 1233 chr3R 23556305 23556341 chr3R 23556408 23556444 10 102 2.0 2.5 2.2 3.1 139 chr3R 23556305 5` UTR CG10164 - chr3R 23556374 5` UTR CG10164 - chr3R 23556444 5` UTR CG10164 - chr3R_10_23555001 chr3R_23555001 RAL-26 1234 chr3R 23558402 23558424 chr3R 23560183 23560205 Bari1 4 1781 1.0 1.0 1.0 2.0 1803 chr3R 23558402 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560205 intron beat-IV + chr3R_4_23555001 chr3R_23555001 RAL-26 1235 chr3R 23684697 23684726 chr3R 23685183 23685212 roo 9 482 4.0 4.5 4.2 1.7 515 chr3R 23684697 exon CG18754 + chr3R 23684954 intron CG18754 + chr3R 23685212 exon CG18754 + chr3R_9_23680001 chr3R_23680001 RAL-26 1236 chr3R 23805578 23805608 chr3R 23805660 23805690 10 82 3.5 2.0 2.8 2.6 112 chr3R 23805578 intron,intron CG33111 -,CG34355 + chr3R 23805634 intron,intron CG33111 -,CG34355 + chr3R 23805690 intron,intron CG33111 -,CG34355 + chr3R_10_23805001 chr3R_23805001 RAL-26 1237 chr3R 23907801 23907816 chr3R 23907889 23907904 5 88 0.5 3.5 2.0 1.7 103 chr3R 23907801 intron sba - chr3R 23907852 intron sba - chr3R 23907904 intron sba - chr3R_5_23905001 chr3R_23905001 RAL-26 1238 chr3R 23944910 23944936 chr3R 23944995 23945021 5 85 1.5 6.5 4.0 1.0 111 chr3R 23944910 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945021 exon CG12268 - chr3R_5_23940001 chr3R_23940001 RAL-26 1239 chr3R 24076926 24076948 chr3R 24078393 24078415 hobo 7 1467 5.0 2.5 3.8 1.5 1489 chr3R 24076926 intron 4EHP - chr3R 24077670 intron 4EHP - chr3R 24078415 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-26 1240 chr3R 24199741 24199770 chr3R 24199821 24199850 6 80 2.0 1.5 1.8 2.1 109 chr3R 24199741 intron twin - chr3R 24199796 intron twin - chr3R 24199850 intron twin - chr3R_6_24195001 chr3R_24195001 RAL-26 1241 chr3R 24207215 24207244 chr3R 24212291 24212320 flea 6 5076 4.0 4.5 4.2 1.2 5105 chr3R 24207215 intron twin - chr3R 24209768 intron twin - chr3R 24212320 intron twin - chr3R_6_24205001 chr3R_24205001 RAL-26 1242 chr3R 24493296 24493310 chr3R 24493526 24493540 BS 4 230 1.0 1.0 1.0 2.0 244 chr3R 24493296 intergenic not near genes chr3R 24493418 intergenic not near genes chr3R 24493540 intergenic not near genes chr3R_4_24490001 chr3R_24490001 RAL-26 1243 chr3R 24667609 24667631 chr3R 24667686 24667708 4 77 0.5 0.0 0.2 3.3 99 chr3R 24667609 intron slo + chr3R 24667658 intron slo + chr3R 24667708 intron slo + chr3R_4_24665001 chr3R_24665001 RAL-26 1244 chr3R 24670055 24670193 chr3R 24670165 24670278 5 100 0.0 0.0 0.0 5.0 223 chr3R 24670055 intron slo + chr3R 24670166 intron slo + chr3R 24670278 intron slo + chr3R_5_24670001 chr3R_24670001 RAL-26 1245 chr3R 24730095 24730114 chr3R 24732473 24732491 Doc 6 2378 4.5 0.0 2.2 1.9 2396 chr3R 24730095 intron tok + chr3R 24731293 intron tok + chr3R 24732491 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-26 1246 chr3R 24743049 24743062 chr3R 24743134 24743145 4 84 2.0 2.0 2.0 1.3 96 chr3R 24743049 intron tok + chr3R 24743097 intron tok + chr3R 24743145 intron tok + chr3R_4_24740001 chr3R_24740001 RAL-26 1247 chr3R 24789966 24789980 chr3R 24790106 24790120 4 140 2.0 2.5 2.2 1.2 154 chr3R 24789966 intron,5` UTR Ets96B +,CG13634 - chr3R 24790043 intron,5` UTR Ets96B +,CG13634 - chr3R 24790120 intron,5` UTR Ets96B +,CG13634 - chr3R_4_24790001 chr3R_24790001 RAL-26 1248 chr3R 24790680 24790698 chr3R 24790761 24790780 7 81 5.5 1.5 3.5 1.6 100 chr3R 24790680 intron Ets96B + chr3R 24790730 intron Ets96B + chr3R 24790780 intron Ets96B + chr3R_7_24790001 chr3R_24790001 RAL-26 1249 chr3R 25004901 25004914 chr3R 25004984 25004996 8 83 0.5 3.5 2.0 2.7 95 chr3R 25004901 intron tnc + chr3R 25004948 intron tnc + chr3R 25004996 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-26 1250 chr3R 25064989 25065013 chr3R 25065071 25065095 5 82 1.0 4.5 2.8 1.3 106 chr3R 25064989 exon veli - chr3R 25065042 intron veli - chr3R 25065095 intron veli - chr3R_5_25065001 chr3R_25065001 RAL-26 1251 chr3R 25159719 25159754 chr3R 25159798 25159833 4 79 1.5 1.5 1.5 1.6 114 chr3R 25159719 intergenic not near genes chr3R 25159776 intergenic not near genes chr3R 25159833 intergenic not near genes chr3R_4_25155001 chr3R_25155001 RAL-26 1252 chr3R 25241799 25241831 chr3R 25241886 25241918 11 86 2.0 2.5 2.2 3.4 119 chr3R 25241799 intergenic to +,CG11854 + chr3R 25241858 intergenic CG11854 +,to + chr3R 25241918 intergenic CG11854 +,to + chr3R_11_25240001 chr3R_25240001 RAL-26 1253 chr3R 25422061 25422096 chr3R 25422142 25422177 4 81 1.0 0.0 0.5 2.7 116 chr3R 25422061 intron Fur1 - chr3R 25422119 intron Fur1 - chr3R 25422177 intron Fur1 - chr3R_4_25420001 chr3R_25420001 RAL-26 1254 chr3R 25526253 25526278 chr3R 25526330 25526355 6 76 1.0 1.0 1.0 3.0 102 chr3R 25526253 intron msi + chr3R 25526304 intron msi + chr3R 25526355 intron msi + chr3R_6_25525001 chr3R_25525001 RAL-26 1255 chr3R 25702285 25702301 chr3R 25702694 25702710 5 409 2.0 1.5 1.8 1.8 425 chr3R 25702285 intron LpR2 - chr3R 25702498 intron LpR2 - chr3R 25702710 intron LpR2 - chr3R_5_25700001 chr3R_25700001 RAL-26 1256 chr3R 25721270 25721293 chr3R 25721351 25721374 10 80 2.0 0.5 1.2 4.5 104 chr3R 25721270 intron LpR2 - chr3R 25721322 intron LpR2 - chr3R 25721374 intron LpR2 - chr3R_10_25720001 chr3R_25720001 RAL-26 1257 chr3R 25738644 25738651 chr3R 25738732 25738739 4 88 6.5 1.0 3.8 0.8 95 chr3R 25738644 intron LpR2 - chr3R 25738692 intron LpR2 - chr3R 25738739 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-26 1258 chr3R 25832692 25832721 chr3R 25841874 25841903 roo 5 9182 3.5 5.0 4.2 1.0 9211 chr3R 25832692 exon alpha4GT2 + chr3R 25837298 intron alpha4GT2 + chr3R 25841903 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-26 1259 chr3R 25983694 25983723 chr3R 25983792 25983821 17 98 3.0 2.5 2.8 4.5 127 chr3R 25983694 exon Nf1 + chr3R 25983758 intron Nf1 + chr3R 25983821 intron Nf1 + chr3R_17_25980001 chr3R_25980001 RAL-26 1260 chr3R 26010172 26010208 chr3R 26010249 26010285 11 76 1.5 3.0 2.2 3.4 113 chr3R 26010172 intergenic not near genes chr3R 26010228 intergenic not near genes chr3R 26010285 intergenic not near genes chr3R_11_26010001 chr3R_26010001 RAL-26 1261 chr3R 26093844 26093875 chr3R 26093921 26093953 9 78 1.5 2.5 2.0 3.0 109 chr3R 26093844 intron dys - chr3R 26093898 intron dys - chr3R 26093953 intron dys - chr3R_9_26090001 chr3R_26090001 RAL-26 1262 chr3R 26104096 26104100 chr3R 26105175 26105179 4 1079 14.5 4.5 9.5 0.4 1083 chr3R 26104096 intergenic not near genes chr3R 26104638 intergenic not near genes chr3R 26105179 intergenic not near genes chr3R_4_26100001 chr3R_26100001 RAL-26 1263 chr3R 26108825 26108837 chr3R 26117408 26117420 Tirant 6 8582 4.0 0.0 2.0 2.0 8595 chr3R 26108825 5` UTR CG31324 + chr3R 26113122 intron CG31324 + chr3R 26117420 intron CG31324 + chr3R_6_26110001 chr3R_26110001 RAL-26 1264 chr3R 26122464 26122480 chr3R 26122540 26122556 6 76 3.5 6.5 5.0 1.0 92 chr3R 26122464 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122556 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-26 1265 chr3R 26214302 26214321 chr3R 26214458 26214477 4 156 0.0 3.5 1.8 1.4 175 chr3R 26214302 intergenic not near genes chr3R 26214390 intergenic not near genes chr3R 26214477 intergenic not near genes chr3R_4_26210001 chr3R_26210001 RAL-26 1266 chr3R 26235488 26235522 chr3R 26235570 26235583 9 76 3.0 3.5 3.2 2.1 95 chr3R 26235488 5` UTR CR42745 + chr3R 26235536 5` UTR CR42745 + chr3R 26235583 5` UTR CR42745 + chr3R_9_26235001 chr3R_26235001 RAL-26 1267 chr3R 26253263 26253295 chr3R 26253707 26253740 6 444 4.5 3.5 4.0 1.2 477 chr3R 26253263 intergenic CR42745 + chr3R 26253502 intergenic not near genes chr3R 26253740 intergenic Ald - chr3R_6_26250001 chr3R_26250001 RAL-26 1268 chr3R 26292108 26292137 chr3R 26292188 26292216 5 80 2.5 0.5 1.5 2.0 108 chr3R 26292108 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292216 intergenic not near genes chr3R_5_26290001 chr3R_26290001 RAL-26 1269 chr3R 26376324 26376358 chr3R 26385484 26385518 roo 7 9159 1.0 0.0 0.5 4.7 9194 chr3R 26376324 intergenic not near genes chr3R 26380921 intergenic not near genes chr3R 26385518 intergenic not near genes chr3R_7_26380001 chr3R_26380001 RAL-26 1270 chr3R 26489141 26489159 chr3R 26489221 26489236 6 80 1.5 3.5 2.5 1.7 95 chr3R 26489141 intron plum - chr3R 26489188 intron plum - chr3R 26489236 intron plum - chr3R_6_26485001 chr3R_26485001 RAL-26 1271 chr3R 26529346 26529379 chr3R 26529429 26529462 6 83 1.0 1.5 1.2 2.7 116 chr3R 26529346 intron plum - chr3R 26529404 intron plum - chr3R 26529462 intron plum - chr3R_6_26525001 chr3R_26525001 RAL-26 1272 chr3R 26558331 26558353 chr3R 26565643 26565665 Stalker4 8 7311 2.0 4.5 3.2 1.9 7334 chr3R 26558331 intron scrib + chr3R 26561998 intron scrib + chr3R 26565665 intron scrib + chr3R_8_26560001 chr3R_26560001 RAL-26 1273 chr3R 26575006 26575035 chr3R 26575085 26575114 11 79 4.0 2.5 3.2 2.6 108 chr3R 26575006 exon scrib + chr3R 26575060 intron scrib + chr3R 26575114 intron scrib + chr3R_11_26575001 chr3R_26575001 RAL-26 1274 chr3R 26642732 26642760 chr3R 26643121 26643153 jockey 4 392 1.0 2.0 1.5 1.6 421 chr3R 26642732 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643153 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-26 1275 chr3R 26675785 26675820 chr3R 26675867 26675902 6 79 10.0 11.0 10.5 0.5 117 chr3R 26675785 intron beat-VII - chr3R 26675844 intron beat-VII - chr3R 26675902 intron beat-VII - chr3R_6_26675001 chr3R_26675001 RAL-26 1276 chr3R 26698842 26698868 chr3R 26698921 26698947 10 79 0.0 3.0 1.5 4.0 105 chr3R 26698842 3` UTR amon - chr3R 26698894 3` UTR amon - chr3R 26698947 3` UTR amon - chr3R_10_26695001 chr3R_26695001 RAL-26 1277 chr3R 26703271 26703284 chr3R 26703368 26703381 6 97 3.0 0.0 1.5 2.4 110 chr3R 26703271 intron amon - chr3R 26703326 intron amon - chr3R 26703381 intron amon - chr3R_6_26700001 chr3R_26700001 RAL-26 1278 chr3R 26740306 26740319 chr3R 26740382 26740395 4 76 0.0 2.0 1.0 2.0 89 chr3R 26740306 intergenic not near genes chr3R 26740350 intergenic not near genes chr3R 26740395 intergenic not near genes chr3R_4_26740001 chr3R_26740001 RAL-26 1279 chr3R 26770242 26770266 chr3R 26770317 26770343 7 77 1.0 3.0 2.0 2.3 101 chr3R 26770242 intergenic CR45563 + chr3R 26770292 intergenic CR45563 + chr3R 26770343 intergenic not near genes chr3R_7_26770001 chr3R_26770001 RAL-26 1280 chr3R 26845580 26845606 chr3R 26845650 26845686 11 78 2.0 2.0 2.0 3.7 106 chr3R 26845580 intron Lerp - chr3R 26845633 intron Lerp - chr3R 26845686 intron Lerp - chr3R_11_26845001 chr3R_26845001 RAL-26 1281 chr3R 27035869 27035883 chr3R 27035956 27035971 8 86 4.0 6.0 5.0 1.3 102 chr3R 27035869 intron RYa-R + chr3R 27035920 intron RYa-R + chr3R 27035971 intron RYa-R + chr3R_8_27035001 chr3R_27035001 RAL-26 1282 chr3R 27140515 27140545 chr3R 27148125 27148155 412 9 7610 6.5 2.5 4.5 1.6 7640 chr3R 27140515 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148155 intron CG6051 - chr3R_9_27140001 chr3R_27140001 RAL-26 1283 chr3R 27184251 27184269 chr3R 27184410 27184428 4 159 9.0 7.0 8.0 0.4 177 chr3R 27184251 intron Ser - chr3R 27184340 intron Ser - chr3R 27184428 intron Ser - chr3R_4_27180001 chr3R_27180001 RAL-26 1284 chr3R 27327427 27327453 chr3R 27327506 27327532 9 79 2.0 4.0 3.0 2.2 105 chr3R 27327427 intergenic not near genes chr3R 27327480 intergenic not near genes chr3R 27327532 intergenic not near genes chr3R_9_27325001 chr3R_27325001 RAL-26 1285 chr3R 27342794 27342815 chr3R 27351375 27351396 Tirant 4 8579 7.0 3.0 5.0 0.7 8602 chr3R 27342794 intron CG42534 + chr3R 27347095 intron CG42534 + chr3R 27351396 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-26 1286 chr3R 27470046 27470075 chr3R 27470708 27470727 11 660 4.0 1.0 2.5 3.1 681 chr3R 27470046 intergenic not near genes chr3R 27470386 intergenic not near genes chr3R 27470727 intergenic not near genes chr3R_11_27470001 chr3R_27470001 RAL-26 1287 chr3R 27494319 27494347 chr3R 27494438 27494466 8 119 2.5 1.0 1.8 2.9 147 chr3R 27494319 intergenic not near genes chr3R 27494392 intergenic not near genes chr3R 27494466 intergenic not near genes chr3R_8_27490001 chr3R_27490001 RAL-26 1288 chr3R 27619700 27619730 chr3R 27619815 27619845 14 113 1.5 3.0 2.2 4.4 145 chr3R 27619700 intron Tusp + chr3R 27619772 intron Tusp + chr3R 27619845 intron Tusp + chr3R_14_27615001 chr3R_27615001 RAL-26 1289 chr3R 27641163 27641179 chr3R 27641234 27641245 4 66 0.5 0.5 0.5 2.7 82 chr3R 27641163 intron tau - chr3R 27641204 intron tau - chr3R 27641245 intron tau - chr3R_4_27640001 chr3R_27640001 RAL-26 1290 chr3R 27660725 27660738 chr3R 27660787 27660814 6 72 0.0 1.5 0.8 3.3 89 chr3R 27660725 intergenic not near genes chr3R 27660770 intergenic not near genes chr3R 27660814 intergenic not near genes chr3R_6_27660001 chr3R_27660001 RAL-26 1291 chr3R 27862966 27862979 chr3R 27868271 27868284 Transpac 4 5305 2.0 1.0 1.5 1.6 5318 chr3R 27862966 intron CG34353 - chr3R 27865625 intron CG34353 - chr3R 27868284 intron CG34353 - chr3R_4_27865001 chr3R_27865001 RAL-26 1292 chr3R 27886449 27886453 chr3R 27886557 27886563 5 109 5.0 3.0 4.0 1.0 114 chr3R 27886449 intron CG34353 - chr3R 27886506 intron CG34353 - chr3R 27886563 intron CG34353 - chr3R_5_27885001 chr3R_27885001 RAL-26 1293 chr3R 28100963 28100992 chr3R 28101570 28101599 4 607 1.5 2.0 1.8 1.4 636 chr3R 28100963 intergenic not near genes chr3R 28101281 intergenic not near genes chr3R 28101599 intergenic not near genes chr3R_4_28100001 chr3R_28100001 RAL-26 1294 chr3R 28103326 28103360 chr3R 28103419 28103453 9 92 2.0 1.5 1.8 3.2 127 chr3R 28103326 intergenic not near genes chr3R 28103390 intergenic not near genes chr3R 28103453 intergenic not near genes chr3R_9_28100001 chr3R_28100001 RAL-26 1295 chr3R 28173681 28173704 chr3R 28181111 28181134 mdg1 4 7430 1.0 2.5 1.8 1.4 7453 chr3R 28173681 intron CG34354 + chr3R 28177408 intron CG34354 + chr3R 28181134 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-26 1296 chr3R 28253338 28253370 chr3R 28255848 28255880 jockey 9 2508 2.5 2.5 2.5 2.6 2542 chr3R 28253338 intergenic not near genes chr3R 28254609 intergenic not near genes chr3R 28255880 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-26 1297 chr3R 28351968 28351992 chr3R 28352044 28352068 5 76 3.5 1.5 2.5 1.4 100 chr3R 28351968 intergenic Or98b + chr3R 28352018 intergenic Or98b + chr3R 28352068 intergenic Or98b + chr3R_5_28350001 chr3R_28350001 RAL-26 1298 chr3R 28371334 28371371 chr3R 28375641 28375678 9 4307 18.5 26.0 22.2 0.4 4344 chr3R 28371334 intergenic not near genes chr3R 28373506 intergenic not near genes chr3R 28375678 intergenic not near genes chr3R_9_28370001 chr3R_28370001 RAL-26 1299 chr3R 28381961 28381993 chr3R 28385921 28385953 9 3960 19.5 7.0 13.2 0.6 3992 chr3R 28381961 intergenic not near genes chr3R 28383957 intergenic not near genes chr3R 28385953 intergenic not near genes chr3R_9_28380001 chr3R_28380001 RAL-26 1300 chr3R 28407712 28407734 chr3R 28407789 28407820 10 85 3.0 1.5 2.2 3.1 108 chr3R 28407712 intergenic not near genes chr3R 28407766 intergenic not near genes chr3R 28407820 intergenic not near genes chr3R_10_28405001 chr3R_28405001 RAL-26 1301 chr3R 28424180 28424204 chr3R 28424269 28424289 7 88 2.0 3.5 2.8 1.8 109 chr3R 28424180 intron beat-VI + chr3R 28424234 intron beat-VI + chr3R 28424289 intron beat-VI + chr3R_7_28420001 chr3R_28420001 RAL-26 1302 chr3R 28478491 28478524 chr3R 28478567 28478600 12 76 4.0 3.5 3.8 2.5 109 chr3R 28478491 intergenic not near genes chr3R 28478546 intergenic not near genes chr3R 28478600 intergenic not near genes chr3R_12_28475001 chr3R_28475001 RAL-26 1303 chr3R 28517039 28517059 chr3R 28517117 28517137 7 78 1.5 3.5 2.5 2.0 98 chr3R 28517039 intron Dhc98D + chr3R 28517088 intron Dhc98D + chr3R 28517137 intron Dhc98D + chr3R_7_28515001 chr3R_28515001 RAL-26 1304 chr3R 28594099 28594119 chr3R 28594178 28594192 4 78 2.0 1.0 1.5 1.6 93 chr3R 28594099 5` UTR CR43440 + chr3R 28594146 5` UTR CR43440 + chr3R 28594192 5` UTR CR43440 + chr3R_4_28590001 chr3R_28590001 RAL-26 1305 chr3R 28692143 28692165 chr3R 28692217 28692242 8 76 1.5 1.5 1.5 3.2 99 chr3R 28692143 intron CG9990 + chr3R 28692192 intron CG9990 + chr3R 28692242 intron CG9990 + chr3R_8_28690001 chr3R_28690001 RAL-26 1306 chr3R 28698364 28698398 chr3R 28698746 28698750 8 378 2.0 4.5 3.2 1.9 386 chr3R 28698364 intron htt + chr3R 28698557 intron htt + chr3R 28698750 intron htt + chr3R_8_28695001 chr3R_28695001 RAL-26 1307 chr3R 28702928 28702963 chr3R 28703012 28703042 18 83 3.5 2.5 3.0 4.5 114 chr3R 28702928 intron htt + chr3R 28702985 intron htt + chr3R 28703042 intron htt + chr3R_18_28700001 chr3R_28700001 RAL-26 1308 chr3R 28758285 28758305 chr3R 28763902 28763922 roo 5 5617 1.0 0.0 0.5 3.3 5637 chr3R 28758285 intergenic aqrs - chr3R 28761104 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-26 1309 chr3R 28792880 28792903 chr3R 28797975 28797998 jockey 5 5095 1.5 3.0 2.2 1.6 5118 chr3R 28792880 intergenic not near genes chr3R 28795439 intergenic not near genes chr3R 28797998 intergenic not near genes chr3R_5_28795001 chr3R_28795001 RAL-26 1310 chr3R 28830901 28830922 chr3R 28830979 28831000 7 78 0.0 2.5 1.2 3.2 99 chr3R 28830901 intron WASp - chr3R 28830950 intron WASp - chr3R 28831000 intron WASp - chr3R_7_28830001 chr3R_28830001 RAL-26 1311 chr3R 21907534 21907536 chr3R 28831799 28831801 26 6924266 17.5 13.0 15.2 1.6 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_26_25365001 chr3R_25365001 RAL-26 1312 chr3R 21907534 21907536 chr3R 28831802 28831802 18 6924267 17.5 13.0 15.2 1.1 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_18_25365001 chr3R_25365001 RAL-26 1313 chr3R 28947973 28947993 chr3R 28948085 28948105 4 112 1.5 2.0 1.8 1.4 132 chr3R 28947973 intron CG14521 - chr3R 28948039 intron CG14521 - chr3R 28948105 intron CG14521 - chr3R_4_28945001 chr3R_28945001 RAL-26 1314 chr3R 21907534 21907536 chr3R 29013340 29013340 8 7105805 17.5 15.5 16.5 0.5 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_8_25460001 chr3R_25460001 RAL-26 1315 chr3R 29213062 29213090 chr3R 29213145 29213172 11 83 3.5 2.0 2.8 2.9 110 chr3R 29213062 intergenic not near genes chr3R 29213117 intergenic not near genes chr3R 29213172 intergenic not near genes chr3R_11_29210001 chr3R_29210001 RAL-26 1316 chr3R 29237257 29237281 chr3R 29239278 29239302 6 2021 12.5 8.0 10.2 0.5 2045 chr3R 29237257 exon CG11951 - chr3R 29238280 intron CG11951 - chr3R 29239302 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-26 1317 chr3R 29351732 29351755 chr3R 29351817 29351840 9 85 1.5 3.5 2.5 2.6 108 chr3R 29351732 intergenic not near genes chr3R 29351786 intergenic not near genes chr3R 29351840 intergenic not near genes chr3R_9_29350001 chr3R_29350001 RAL-26 1318 chr3R 29355958 29355991 chr3R 29356037 29356071 6 80 2.0 0.5 1.2 2.7 113 chr3R 29355958 intergenic CR45547 - chr3R 29356014 intergenic CR45547 - chr3R 29356071 intergenic CR45547 - chr3R_6_29355001 chr3R_29355001 RAL-26 1319 chr3R 29406614 29406638 chr3R 29407900 29407924 jockey 5 1285 5.0 5.0 5.0 0.8 1310 chr3R 29406614 intron Ptp99A + chr3R 29407269 intron Ptp99A + chr3R 29407924 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-26 1320 chr3R 29412013 29412046 chr3R 29412092 29412125 4 79 3.0 2.0 2.5 1.1 112 chr3R 29412013 intron Ptp99A + chr3R 29412069 intron Ptp99A + chr3R 29412125 intron Ptp99A + chr3R_4_29410001 chr3R_29410001 RAL-26 1321 chr3R 29412965 29412996 chr3R 29413315 29413346 6 348 1.5 5.5 3.5 1.3 381 chr3R 29412965 intron Ptp99A + chr3R 29413156 intron Ptp99A + chr3R 29413346 intron Ptp99A + chr3R_6_29410001 chr3R_29410001 RAL-26 1322 chr3R 29433430 29433451 chr3R 29433508 29433529 7 78 4.0 2.0 3.0 1.8 99 chr3R 29433430 intron Ptp99A + chr3R 29433480 intron Ptp99A + chr3R 29433529 intron Ptp99A + chr3R_7_29430001 chr3R_29430001 RAL-26 1323 chr3R 29447819 29447849 chr3R 29447926 29447956 11 105 1.5 2.0 1.8 3.9 137 chr3R 29447819 intron Ptp99A + chr3R 29447888 intron Ptp99A + chr3R 29447956 intron Ptp99A + chr3R_11_29445001 chr3R_29445001 RAL-26 1324 chr3R 29471914 29472034 chr3R 29471994 29472127 17 85 0.0 0.0 0.0 17.0 213 chr3R 29471914 intron Ptp99A + chr3R 29472020 intron Ptp99A + chr3R 29472127 intron Ptp99A + chr3R_17_29470001 chr3R_29470001 RAL-26 1325 chr3R 29539430 29539461 chr3R 29539506 29539537 6 76 1.5 0.0 0.8 3.3 107 chr3R 29539430 intergenic not near genes chr3R 29539484 intergenic not near genes chr3R 29539537 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-26 1326 chr3R 29655654 29655670 chr3R 29655733 29655749 5 77 1.5 2.0 1.8 1.8 95 chr3R 29655654 intron Dop1R2 - chr3R 29655702 intron Dop1R2 - chr3R 29655749 intron Dop1R2 - chr3R_5_29655001 chr3R_29655001 RAL-26 1327 chr3R 29758936 29758971 chr3R 29759014 29759049 9 76 1.0 0.5 0.8 5.0 113 chr3R 29758936 3` UTR CR44953 - chr3R 29758992 3` UTR CR44953 - chr3R 29759049 intergenic CR44953 - chr3R_9_29755001 chr3R_29755001 RAL-26 1328 chr3R 29782264 29782291 chr3R 29782339 29782366 9 76 3.5 1.0 2.2 2.8 102 chr3R 29782264 intron kay + chr3R 29782315 intron kay + chr3R 29782366 intron kay + chr3R_9_29780001 chr3R_29780001 RAL-26 1329 chr3R 29882020 29882053 chr3R 29891177 29891210 roo 5 9157 1.0 2.0 1.5 2.0 9190 chr3R 29882020 intron CG31038 + chr3R 29886615 intron CG31038 + chr3R 29891210 intron CG31038 + chr3R_5_29885001 chr3R_29885001 RAL-26 1330 chr3R 29963476 29963512 chr3R 29963577 29963614 11 102 1.5 2.5 2.0 3.7 138 chr3R 29963476 intron TkR99D - chr3R 29963545 intron TkR99D - chr3R 29963614 intron TkR99D - chr3R_11_29960001 chr3R_29960001 RAL-26 1331 chr3R 29966062 29966075 chr3R 29966139 29966152 4 77 0.5 5.5 3.0 1.0 90 chr3R 29966062 intron TkR99D - chr3R 29966107 intron TkR99D - chr3R 29966152 intron TkR99D - chr3R_4_29965001 chr3R_29965001 RAL-26 1332 chr3R 30001729 30001756 chr3R 30001805 30001832 5 76 7.5 2.0 4.8 0.9 103 chr3R 30001729 intron Tace + chr3R 30001780 intron Tace + chr3R 30001832 intron Tace + chr3R_5_30000001 chr3R_30000001 RAL-26 1333 chr3R 30084854 30084883 chr3R 30086316 30086350 hobo 9 1466 3.5 4.5 4.0 1.8 1496 chr3R 30084854 intron sima + chr3R 30085602 intron sima + chr3R 30086350 intron sima + chr3R_9_30085001 chr3R_30085001 RAL-26 1334 chr3R 30177742 30177773 chr3R 30177859 30177890 7 116 0.5 3.0 1.8 2.5 148 chr3R 30177742 intergenic CG1983 -,CG15530 + chr3R 30177816 intergenic CG15530 +,CG1983 - chr3R 30177890 5` UTR CG15530 + chr3R_7_30175001 chr3R_30175001 RAL-26 1335 chr3R 30211115 30211133 chr3R 30212359 30212367 4 1238 0.5 7.5 4.0 0.8 1252 chr3R 30211115 exon CecA1 + chr3R 30211741 intergenic CecA2 +,CecA1 + chr3R 30212367 intron CecA2 + chr3R_4_30210001 chr3R_30210001 RAL-26 1336 chr3R 30241388 30241397 chr3R 30241497 30241506 6 109 3.5 3.5 3.5 1.3 118 chr3R 30241388 3` UTR CG9737 - chr3R 30241447 3` UTR CG9737 - chr3R 30241506 3` UTR CG9737 - chr3R_6_30240001 chr3R_30240001 RAL-26 1337 chr3R 30260367 30260398 chr3R 30260443 30260474 10 76 3.0 1.0 2.0 3.3 107 chr3R 30260367 intergenic not near genes chr3R 30260420 intergenic not near genes chr3R 30260474 intergenic not near genes chr3R_10_30260001 chr3R_30260001 RAL-26 1338 chr3R 30268853 30268866 chr3R 30268931 30268953 6 86 1.5 3.5 2.5 1.7 100 chr3R 30268853 intergenic not near genes chr3R 30268903 intergenic not near genes chr3R 30268953 intergenic not near genes chr3R_6_30265001 chr3R_30265001 RAL-26 1339 chr3R 30317325 30317357 chr3R 30324917 30324948 roo 5 7590 0.0 3.0 1.5 2.0 7623 chr3R 30317325 intron hdc + chr3R 30321136 intron hdc + chr3R 30324948 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-26 1340 chr3R 30339555 30339577 chr3R 30339864 30339886 7 309 2.0 5.5 3.8 1.5 331 chr3R 30339555 intron hdc + chr3R 30339720 intron hdc + chr3R 30339886 intron hdc + chr3R_7_30335001 chr3R_30335001 RAL-26 1341 chr3R 30354726 30354754 chr3R 30354811 30354839 7 83 2.5 2.5 2.5 2.0 113 chr3R 30354726 intron hdc + chr3R 30354782 intron hdc + chr3R 30354839 intron hdc + chr3R_7_30350001 chr3R_30350001 RAL-26 1342 chr3R 30396216 30396237 chr3R 30404482 30404499 roo 7 8265 2.0 2.0 2.0 2.3 8283 chr3R 30396216 intergenic not near genes chr3R 30400358 intergenic not near genes chr3R 30404499 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-26 1343 chr3R 30456405 30456418 chr3R 30456485 30456498 5 80 0.0 3.5 1.8 1.8 93 chr3R 30456405 intergenic CG2224 - chr3R 30456452 3` UTR CG2224 - chr3R 30456498 3` UTR CG2224 - chr3R_5_30455001 chr3R_30455001 RAL-26 1344 chr3R 30480473 30480496 chr3R 30482941 30482964 jockey 8 2468 7.0 2.5 4.8 1.4 2491 chr3R 30480473 intron PH4alphaEFB + chr3R 30481718 intron PH4alphaEFB + chr3R 30482964 intron PH4alphaEFB + chr3R_8_30480001 chr3R_30480001 RAL-26 1345 chr3R 30549015 30549036 chr3R 30549107 30549128 5 92 1.5 1.5 1.5 2.0 113 chr3R 30549015 intron tmod + chr3R 30549072 intron tmod + chr3R 30549128 intron tmod + chr3R_5_30545001 chr3R_30545001 RAL-26 1346 chr3R 30627602 30627637 chr3R 30627682 30627717 17 78 4.0 2.5 3.2 4.0 115 chr3R 30627602 3` UTR CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627717 exon CG2267 - chr3R_17_30625001 chr3R_30625001 RAL-26 1347 chr3R 30679529 30679551 chr3R 30686998 30687020 blood 7 7466 3.0 5.0 4.0 1.4 7491 chr3R 30679529 intergenic not near genes chr3R 30683274 intergenic not near genes chr3R 30687020 intergenic not near genes chr3R_7_30680001 chr3R_30680001 RAL-26 1348 chr3R 30690163 30690192 chr3R 30690247 30690276 9 84 4.0 5.5 4.8 1.6 113 chr3R 30690163 intergenic Spn100A + chr3R 30690220 intergenic Spn100A + chr3R 30690276 intergenic Spn100A + chr3R_9_30690001 chr3R_30690001 RAL-26 1349 chr3R 30700865 30700874 chr3R 30700988 30700997 5 123 2.0 0.0 1.0 2.5 132 chr3R 30700865 intergenic not near genes chr3R 30700931 intergenic not near genes chr3R 30700997 intergenic not near genes chr3R_5_30700001 chr3R_30700001 RAL-26 1350 chr3R 30818809 30818835 chr3R 30820374 30820400 1360 7 1565 1.0 0.5 0.8 3.9 1591 chr3R 30818809 intron cindr + chr3R 30819604 intron cindr + chr3R 30820400 intron cindr + chr3R_7_30815001 chr3R_30815001 RAL-26 1351 chr3R 30900521 30900552 chr3R 30900601 30900632 10 80 2.0 2.5 2.2 3.1 111 chr3R 30900521 exon Cyp4c3 + chr3R 30900576 3` UTR Cyp4c3 + chr3R 30900632 3` UTR Cyp4c3 + chr3R_10_30900001 chr3R_30900001 RAL-26 1352 chr3R 31074232 31074253 chr3R 31081830 31081851 springer 5 7598 2.0 0.0 1.0 2.5 7619 chr3R 31074232 intron Sox100B + chr3R 31078042 intron Sox100B + chr3R 31081851 intron Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-26 1353 chr3R 31105219 31105247 chr3R 31105476 31105504 9 255 2.0 2.5 2.2 2.8 285 chr3R 31105219 intergenic not near genes chr3R 31105362 intergenic not near genes chr3R 31105504 intergenic not near genes chr3R_9_31105001 chr3R_31105001 RAL-26 1354 chr3R 31163239 31163253 chr3R 31163311 31163322 7 78 6.0 2.0 4.0 1.4 83 chr3R 31163239 intron,intron Gycbeta100B +,stops - chr3R 31163280 intron,intron Gycbeta100B +,stops - chr3R 31163322 intron,intron Gycbeta100B +,stops - chr3R_7_31160001 chr3R_31160001 RAL-26 1355 chr3R 31262857 31262882 chr3R 31262957 31262989 8 106 1.5 1.5 1.5 3.2 132 chr3R 31262857 exon CG18673 + chr3R 31262923 exon CG18673 + chr3R 31262989 intron CG18673 + chr3R_8_31260001 chr3R_31260001 RAL-26 1356 chr3R 31279372 31279409 chr3R 31285563 31285600 diver 9 6188 1.5 4.0 2.8 2.4 6228 chr3R 31279372 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285600 intergenic not near genes chr3R_9_31280001 chr3R_31280001 RAL-26 1357 chr3R 31413088 31413100 chr3R 31418288 31418300 copia 4 5200 5.0 1.0 3.0 1.0 5212 chr3R 31413088 intron Gprk2 + chr3R 31415694 intron Gprk2 + chr3R 31418300 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-26 1358 chr3R 31426878 31426898 chr3R 31426970 31426990 7 92 1.5 1.0 1.2 3.2 112 chr3R 31426878 intron Gprk2 + chr3R 31426934 intron Gprk2 + chr3R 31426990 intron Gprk2 + chr3R_7_31425001 chr3R_31425001 RAL-26 1359 chr3R 31435364 31435387 chr3R 31435516 31435539 5 151 0.5 2.0 1.2 2.3 175 chr3R 31435364 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435539 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 RAL-26 1360 chr3R 31464223 31464255 chr3R 31464400 31464432 11 175 6.0 5.0 5.5 1.7 209 chr3R 31464223 intergenic CG11333 + chr3R 31464328 intergenic CG11333 + chr3R 31464432 intergenic CG11333 + chr3R_11_31460001 chr3R_31460001 RAL-26 1361 chr3R 31522369 31522399 chr3R 31522480 31522510 7 111 2.5 2.5 2.5 2.0 141 chr3R 31522369 3` UTR CR45573 - chr3R 31522440 3` UTR CR45573 - chr3R 31522510 3` UTR CR45573 - chr3R_7_31520001 chr3R_31520001 RAL-26 1362 chr3R 31528237 31528270 chr3R 31528437 31528471 7 199 3.5 2.0 2.8 1.8 234 chr3R 31528237 intergenic not near genes chr3R 31528354 intergenic not near genes chr3R 31528471 intergenic not near genes chr3R_7_31525001 chr3R_31525001 RAL-26 1363 chr3R 31589097 31589132 chr3R 31589188 31589224 10 91 2.0 6.0 4.0 2.0 127 chr3R 31589097 3` UTR,exon CR45190 -,CG1635 + chr3R 31589160 3` UTR,exon CR45190 -,CG1635 + chr3R 31589224 3` UTR,exon CR45190 -,CG1635 + chr3R_10_31585001 chr3R_31585001 RAL-26 1364 chr3R 31624454 31624482 chr3R 31624546 31624574 13 92 2.0 2.5 2.2 4.1 120 chr3R 31624454 intron kek6 + chr3R 31624514 intron kek6 + chr3R 31624574 intron kek6 + chr3R_13_31620001 chr3R_31620001 RAL-26 1365 chr3R 31630068 31630086 chr3R 31630173 31630191 6 105 0.5 2.0 1.2 2.7 123 chr3R 31630068 intron kek6 + chr3R 31630130 intron kek6 + chr3R 31630191 intron kek6 + chr3R_6_31630001 chr3R_31630001 RAL-26 1366 chr3R 31691532 31691564 chr3R 31696298 31696313 Doc 20 4764 3.5 6.0 4.8 3.4 4781 chr3R 31691532 intergenic not near genes chr3R 31693922 intergenic not near genes chr3R 31696313 intergenic not near genes chr3R_20_31690001 chr3R_31690001 RAL-26 1367 chr3R 31699717 31699752 chr3R 31699799 31699832 10 82 3.5 4.5 4.0 2.0 115 chr3R 31699717 intergenic not near genes chr3R 31699774 intergenic not near genes chr3R 31699832 intergenic not near genes chr3R_10_31695001 chr3R_31695001 RAL-26 1368 chr3R 31831537 31831569 chr3R 31831616 31831648 6 79 3.0 6.0 4.5 1.1 111 chr3R 31831537 intron RhoGAP100F + chr3R 31831592 intron RhoGAP100F + chr3R 31831648 intron RhoGAP100F + chr3R_6_31830001 chr3R_31830001 RAL-26 1369 chr3R 31870653 31870682 chr3R 31870744 31870773 5 90 3.0 4.5 3.8 1.0 120 chr3R 31870653 intron heph - chr3R 31870713 intron heph - chr3R 31870773 intron heph - chr3R_5_31870001 chr3R_31870001 RAL-26 1370 chr3R 31883735 31883767 chr3R 31883846 31883878 19 111 2.5 2.5 2.5 5.4 143 chr3R 31883735 intron heph - chr3R 31883806 intron heph - chr3R 31883878 intron heph - chr3R_19_31880001 chr3R_31880001 RAL-26 1371 chr3R 31925703 31925721 chr3R 31925779 31925797 4 76 0.5 3.0 1.8 1.4 94 chr3R 31925703 intron heph - chr3R 31925750 intron heph - chr3R 31925797 intron heph - chr3R_4_31925001 chr3R_31925001 RAL-26 1372 chr3R 31949503 31949537 chr3R 31949589 31949599 6 82 3.5 3.0 3.2 1.4 96 chr3R 31949503 intron heph - chr3R 31949551 intron heph - chr3R 31949599 intron heph - chr3R_6_31945001 chr3R_31945001 RAL-26 1373 chr3R 31997991 31998025 chr3R 32005461 32005495 blood 9 7470 1.0 2.5 1.8 3.2 7504 chr3R 31997991 intron heph - chr3R 32001743 intron heph - chr3R 32005495 intron heph - chr3R_9_32000001 chr3R_32000001 RAL-26 1374 chr3R 32022322 32022356 chr3R 32022424 32022458 9 101 2.5 1.0 1.8 3.2 136 chr3R 32022322 5` UTR CR45557 + chr3R 32022390 5` UTR CR45557 + chr3R 32022458 5` UTR CR45557 + chr3R_9_32020001 chr3R_32020001 RAL-26 1375 chr4 671616 671634 chr4 680199 680216 Tirant 6 8582 0.5 3.5 2.0 2.0 8600 chr4 671616 intron CG11360 + chr4 675916 intron CG11360 + chr4 680216 intron CG11360 + chr4_6_675001 chr4_675001 RAL-26 1376 chr4 905572 905595 chr4 905654 905677 7 79 0.0 2.5 1.2 3.2 105 chr4 905572 5` UTR unc-13 - chr4 905624 5` UTR unc-13 - chr4 905677 5` UTR unc-13 - chr4_7_905001 chr4_905001 RAL-26 1377 chrX 295865 295881 chrX 303485 303501 412 4 7620 2.0 1.5 1.8 1.4 7636 chrX 295865 intron CG3777 + chrX 299683 intron CG3777 + chrX 303501 intron CG3777 + chrX_4_295001 chrX_295001 RAL-26 1378 chrX 406737 406749 chrX 406850 406862 7 113 3.0 1.5 2.2 2.2 125 chrX 406737 intron CG32816 - chrX 406800 intron CG32816 - chrX 406862 intron CG32816 - chrX_7_405001 chrX_405001 RAL-26 1379 chrX 428417 428448 chrX 434602 434633 3S18 4 6185 1.0 1.5 1.2 1.8 6216 chrX 428417 intron CG32816 - chrX 431525 intron CG32816 - chrX 434633 intron CG32816 - chrX_4_430001 chrX_430001 RAL-26 1380 chrX 551424 551450 chrX 558986 559012 412 7 7559 5.5 2.0 3.8 1.5 7588 chrX 551424 intron Appl + chrX 555218 intron Appl + chrX 559012 intron Appl + chrX_7_555001 chrX_555001 RAL-26 1381 chrX 726087 726115 chrX 726171 726199 7 82 2.0 4.5 3.2 1.7 112 chrX 726087 intron sdk + chrX 726143 intron sdk + chrX 726199 intron sdk + chrX_7_725001 chrX_725001 RAL-26 1382 chrX 778128 778150 chrX 778218 778240 10 90 2.0 0.5 1.2 4.5 112 chrX 778128 intron fz3 + chrX 778184 intron fz3 + chrX 778240 intron fz3 + chrX_10_775001 chrX_775001 RAL-26 1383 chrX 780595 780601 chrX 780671 780677 4 76 2.0 0.0 1.0 2.0 82 chrX 780595 intron fz3 + chrX 780636 intron fz3 + chrX 780677 intron fz3 + chrX_4_780001 chrX_780001 RAL-26 1384 chrX 806782 806817 chrX 806878 806913 11 96 3.5 1.5 2.5 3.1 131 chrX 806782 intron Sec22 + chrX 806848 intron Sec22 + chrX 806913 intron Sec22 + chrX_11_805001 chrX_805001 RAL-26 1385 chrX 827600 827617 chrX 835392 835409 roo 6 7792 3.0 0.0 1.5 2.4 7809 chrX 827600 intron CG43867 - chrX 831504 intron CG43867 - chrX 835409 intron CG43867 - chrX_6_830001 chrX_830001 RAL-26 1386 chrX 906704 906729 chrX 908493 908518 S-element 12 1789 6.0 5.5 5.8 1.8 1814 chrX 906704 intron CG43867 - chrX 907611 intron CG43867 - chrX 908518 intron CG43867 - chrX_12_905001 chrX_905001 RAL-26 1387 chrX 1003109 1003133 chrX 1003598 1003622 8 488 3.5 1.5 2.5 2.3 513 chrX 1003109 intergenic not near genes chrX 1003366 intergenic not near genes chrX 1003622 intergenic not near genes chrX_8_1000001 chrX_1000001 RAL-26 1388 chrX 1050550 1050576 chrX 1050626 1050652 6 76 1.5 0.5 1.0 3.0 102 chrX 1050550 intron CR44779 + chrX 1050601 intron CR44779 + chrX 1050652 intron CR44779 + chrX_6_1050001 chrX_1050001 RAL-26 1389 chrX 1518038 1518064 chrX 1523440 1523461 jockey 9 5401 5.0 1.0 3.0 2.2 5423 chrX 1518038 intergenic inc + chrX 1520750 intergenic not near genes chrX 1523461 intergenic not near genes chrX_9_1520001 chrX_1520001 RAL-26 1390 chrX 1627979 1628002 chrX 1635447 1635470 gtwin 6 7468 2.5 4.0 3.2 1.4 7491 chrX 1627979 intron,intron Mur2B -,br + chrX 1631724 intron,intron Mur2B -,br + chrX 1635470 intron,intron Mur2B -,br + chrX_6_1630001 chrX_1630001 RAL-26 1391 chrX 1968290 1968361 chrX 1968504 1968524 4 201 4.5 7.0 5.8 0.6 234 chrX 1968290 intron Hr4 + chrX 1968407 intron Hr4 + chrX 1968524 intron Hr4 + chrX_4_1965001 chrX_1965001 RAL-26 1392 chrX 2206809 2206842 chrX 2208023 2208054 9 1216 20.0 21.5 20.8 0.4 1245 chrX 2206809 intron msta - chrX 2207432 intron msta - chrX 2208054 intron msta - chrX_9_2205001 chrX_2205001 RAL-26 1393 chrX 2291647 2291661 chrX 2291730 2291744 5 83 2.0 0.0 1.0 2.5 97 chrX 2291647 intron CG2865 - chrX 2291696 intron CG2865 - chrX 2291744 intron CG2865 - chrX_5_2290001 chrX_2290001 RAL-26 1394 chrX 2399840 2399861 chrX 2408193 2408214 roo 5 8353 4.5 5.0 4.8 0.9 8374 chrX 2399840 intergenic not near genes chrX 2404027 intergenic not near genes chrX 2408214 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-26 1395 chrX 2578818 2578835 chrX 2578922 2578939 4 104 2.0 0.5 1.2 1.8 121 chrX 2578818 intergenic Pdfr +,Vha36-3 - chrX 2578878 intergenic Vha36-3 -,Pdfr + chrX 2578939 intergenic Vha36-3 -,Pdfr + chrX_4_2575001 chrX_2575001 RAL-26 1396 chrX 2844908 2844928 chrX 2852318 2852338 mdg1 5 7410 0.5 2.5 1.5 2.0 7430 chrX 2844908 intron kirre + chrX 2848623 intron kirre + chrX 2852338 intron kirre + chrX_5_2845001 chrX_2845001 RAL-26 1397 chrX 3275525 3275559 chrX 3275612 3275633 13 85 5.0 4.0 4.5 2.4 108 chrX 3275525 intron dnc + chrX 3275579 intron dnc + chrX 3275633 intron dnc + chrX_13_3275001 chrX_3275001 RAL-26 1398 chrX 3415021 3415049 chrX 3421206 3421234 3S18 6 6185 0.5 1.5 1.0 3.0 6213 chrX 3415021 intron,intron CR44999 +,CG12535 - chrX 3418128 intron,intron CR44999 +,CG12535 - chrX 3421234 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-26 1399 chrX 3493091 3493115 chrX 3502250 3502274 roo 6 9159 2.0 1.5 1.8 2.1 9183 chrX 3493091 intron,intron CR44999 +,Gas8 - chrX 3497682 intron,intron CR44999 +,Gas8 - chrX 3502274 intron,intron CR44999 +,Gas8 - chrX_6_3495001 chrX_3495001 RAL-26 1400 chrX 3597549 3597580 chrX 3619717 3619748 roo 6 22168 2.0 2.0 2.0 2.0 22199 chrX 3597549 intron AstA-R1 + chrX 3608648 intron AstA-R1 + chrX 3619748 intron AstA-R1 + chrX_6_3605001 chrX_3605001 RAL-26 1401 chrX 3657413 3657445 chrX 3657493 3657510 14 78 2.0 3.5 2.8 3.7 97 chrX 3657413 intron AstA-R1 + chrX 3657462 intron AstA-R1 + chrX 3657510 intron AstA-R1 + chrX_14_3655001 chrX_3655001 RAL-26 1402 chrX 3726761 3726795 chrX 3730158 3730182 NOF 5 3395 0.5 0.0 0.2 4.2 3421 chrX 3726761 intron tlk + chrX 3728472 intron tlk + chrX 3730182 intron tlk + chrX_5_3725001 chrX_3725001 RAL-26 1403 chrX 3822928 3822945 chrX 3824766 3824798 6 1841 11.0 22.0 16.5 0.3 1870 chrX 3822928 intron ec + chrX 3823863 intron ec + chrX 3824798 intron ec + chrX_6_3820001 chrX_3820001 RAL-26 1404 chrX 3866112 3866137 chrX 3866190 3866215 4 78 0.0 1.5 0.8 2.2 103 chrX 3866112 intron yin - chrX 3866164 intron yin - chrX 3866215 intron yin - chrX_4_3865001 chrX_3865001 RAL-26 1405 chrX 3881275 3881304 chrX 3881414 3881441 9 139 2.5 3.5 3.0 2.2 166 chrX 3881275 intron VhaAC39-1 + chrX 3881358 intron VhaAC39-1 + chrX 3881441 intron VhaAC39-1 + chrX_9_3880001 chrX_3880001 RAL-26 1406 chrX 3922130 3922159 chrX 3922405 3922434 10 274 0.0 3.5 1.8 3.6 304 chrX 3922130 intron CG42541 - chrX 3922282 intron CG42541 - chrX 3922434 intron CG42541 - chrX_10_3920001 chrX_3920001 RAL-26 1407 chrX 4048501 4048527 chrX 4048577 4048603 8 75 2.0 1.5 1.8 2.9 102 chrX 4048501 3` UTR CR45482 - chrX 4048552 3` UTR CR45482 - chrX 4048603 3` UTR CR45482 - chrX_8_4045001 chrX_4045001 RAL-26 1408 chrX 4157902 4157912 chrX 4164954 4164965 297 4 7053 3.5 1.5 2.5 1.1 7063 chrX 4157902 intron Fas2 - chrX 4161434 intron Fas2 - chrX 4164965 intron Fas2 - chrX_4_4160001 chrX_4160001 RAL-26 1409 chrX 4396974 4397009 chrX 4397058 4397093 9 85 0.5 1.5 1.0 4.5 119 chrX 4396974 intron CR32773 - chrX 4397034 intron CR32773 - chrX 4397093 intron CR32773 - chrX_9_4395001 chrX_4395001 RAL-26 1410 chrX 4415310 4415337 chrX 4415385 4415413 8 76 0.5 1.0 0.8 4.4 103 chrX 4415310 intron,intron CR32773 -,bi + chrX 4415362 intron,intron CR32773 -,bi + chrX 4415413 intron,intron CR32773 -,bi + chrX_8_4415001 chrX_4415001 RAL-26 1411 chrX 4477146 4477155 chrX 4477424 4477433 5 278 0.5 3.0 1.8 1.8 287 chrX 4477146 intron,intron CR32773 -,bi + chrX 4477290 intron,intron CR32773 -,bi + chrX 4477433 intron,intron CR32773 -,bi + chrX_5_4475001 chrX_4475001 RAL-26 1412 chrX 4700400 4700425 chrX 4700743 4700768 jockey 4 342 0.5 0.5 0.5 2.7 368 chrX 4700400 3` UTR ctp + chrX 4700584 3` UTR ctp + chrX 4700768 3` UTR ctp + chrX_4_4700001 chrX_4700001 RAL-26 1413 chrX 4723577 4723586 chrX 4723656 4723666 6 80 4.5 5.0 4.8 1.0 89 chrX 4723577 intron Proc-R + chrX 4723622 intron Proc-R + chrX 4723666 intron Proc-R + chrX_6_4720001 chrX_4720001 RAL-26 1414 chrX 4731818 4731830 chrX 4736911 4736923 jockey 7 5093 6.5 6.5 6.5 0.9 5105 chrX 4731818 intergenic not near genes chrX 4734370 intergenic not near genes chrX 4736923 intergenic not near genes chrX_7_4730001 chrX_4730001 RAL-26 1415 chrX 4792388 4792409 chrX 4792821 4792842 jockey 4 433 4.0 5.5 4.8 0.7 454 chrX 4792388 intergenic not near genes chrX 4792615 intergenic not near genes chrX 4792842 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-26 1416 chrX 4827979 4828001 chrX 4835345 4835372 Stalker4 4 7370 4.5 3.5 4.0 0.8 7393 chrX 4827979 intergenic not near genes chrX 4831676 intergenic not near genes chrX 4835372 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-26 1417 chrX 5049581 5049609 chrX 5049669 5049695 4 87 0.5 2.0 1.2 1.8 114 chrX 5049581 intron,intron CR44833 -,ovo + chrX 5049638 intron,intron CR44833 -,ovo + chrX 5049695 intron,intron CR44833 -,ovo + chrX_4_5045001 chrX_5045001 RAL-26 1418 chrX 5134807 5134827 chrX 5134908 5134928 8 101 2.0 3.0 2.5 2.3 121 chrX 5134807 intron,intron CG15465 +,rg + chrX 5134868 intron,intron CG15465 +,rg + chrX 5134928 intron,intron CG15465 +,rg + chrX_8_5130001 chrX_5130001 RAL-26 1419 chrX 5220391 5220408 chrX 5220632 5220649 4 241 0.0 3.0 1.5 1.6 258 chrX 5220391 intron,intron CG15465 +,rg + chrX 5220520 intron,intron CG15465 +,rg + chrX 5220649 intron,intron CG15465 +,rg + chrX_4_5220001 chrX_5220001 RAL-26 1420 chrX 5338708 5338736 chrX 5339961 5339989 jockey 5 1252 1.0 1.5 1.2 2.3 1281 chrX 5338708 intergenic not near genes chrX 5339348 intergenic not near genes chrX 5339989 intergenic SK + chrX_5_5335001 chrX_5335001 RAL-26 1421 chrX 5349282 5349303 chrX 5349359 5349380 4 77 0.5 2.0 1.2 1.8 98 chrX 5349282 intron SK + chrX 5349331 intron SK + chrX 5349380 intron SK + chrX_4_5345001 chrX_5345001 RAL-26 1422 chrX 5541580 5541598 chrX 5541660 5541679 8 81 2.0 7.0 4.5 1.5 99 chrX 5541580 intron Vsx2 - chrX 5541630 intron Vsx2 - chrX 5541679 intron Vsx2 - chrX_8_5540001 chrX_5540001 RAL-26 1423 chrX 5640035 5640067 chrX 5640324 5640356 8 288 4.5 3.5 4.0 1.6 321 chrX 5640035 intron CG42492 - chrX 5640196 intron CG42492 - chrX 5640356 intron CG42492 - chrX_8_5640001 chrX_5640001 RAL-26 1424 chrX 5798865 5798891 chrX 5799027 5799048 6 161 0.5 3.5 2.0 2.0 183 chrX 5798865 intergenic not near genes chrX 5798956 intergenic not near genes chrX 5799048 intergenic not near genes chrX_6_5795001 chrX_5795001 RAL-26 1425 chrX 5883814 5883824 chrX 5884055 5884065 pogo 4 241 3.0 1.5 2.2 1.2 251 chrX 5883814 intron CR45668 - chrX 5883940 intron CR45668 - chrX 5884065 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-26 1426 chrX 6315180 6315200 chrX 6315258 6315278 4 78 1.0 1.0 1.0 2.0 98 chrX 6315180 intron CG15894 + chrX 6315229 intron CG15894 + chrX 6315278 intron CG15894 + chrX_4_6315001 chrX_6315001 RAL-26 1427 chrX 6335222 6335234 chrX 6337732 6337743 Tirant 4 2510 0.0 4.5 2.2 1.2 2521 chrX 6335222 intergenic not near genes chrX 6336482 intergenic not near genes chrX 6337743 intergenic CG3842 + chrX_4_6335001 chrX_6335001 RAL-26 1428 chrX 6388666 6388693 chrX 6388741 6388769 4 76 0.5 1.0 0.8 2.2 103 chrX 6388666 intergenic not near genes chrX 6388718 intergenic not near genes chrX 6388769 intergenic not near genes chrX_4_6385001 chrX_6385001 RAL-26 1429 chrX 6392874 6392898 chrX 6397633 6397663 Doc 7 4764 5.0 1.0 3.0 1.8 4789 chrX 6392874 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397663 intergenic not near genes chrX_7_6395001 chrX_6395001 RAL-26 1430 chrX 6562816 6562849 chrX 6571298 6571331 Tirant 8 8482 3.5 2.5 3.0 2.0 8515 chrX 6562816 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571331 intron CG34417 + chrX_8_6565001 chrX_6565001 RAL-26 1431 chrX 6737518 6737544 chrX 6737600 6737626 6 82 3.0 2.5 2.8 1.6 108 chrX 6737518 intron CG3168 - chrX 6737572 intron CG3168 - chrX 6737626 intron CG3168 - chrX_6_6735001 chrX_6735001 RAL-26 1432 chrX 6897587 6897700 chrX 6897665 6897810 5 104 1.5 1.5 1.5 2.0 223 chrX 6897587 intergenic not near genes chrX 6897698 intergenic not near genes chrX 6897810 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-26 1433 chrX 7023607 7023631 chrX 7030997 7031021 Tabor 6 7390 1.0 2.0 1.5 2.4 7414 chrX 7023607 intron CG12541 - chrX 7027314 intron CG12541 - chrX 7031021 intron CG12541 - chrX_6_7025001 chrX_7025001 RAL-26 1434 chrX 7048628 7048662 chrX 7048706 7048740 17 78 2.5 2.0 2.2 5.3 112 chrX 7048628 intron CG12541 - chrX 7048684 intron CG12541 - chrX 7048740 intron CG12541 - chrX_17_7045001 chrX_7045001 RAL-26 1435 chrX 7073088 7073111 chrX 7073168 7073191 7 79 2.0 3.0 2.5 2.0 103 chrX 7073088 intergenic CG4607 + chrX 7073140 intergenic CG4607 + chrX 7073191 intergenic not near genes chrX_7_7070001 chrX_7070001 RAL-26 1436 chrX 7702906 7702929 chrX 7703345 7703368 jockey 7 438 6.0 2.0 4.0 1.4 462 chrX 7702906 intron CHES-1-like - chrX 7703137 intron CHES-1-like - chrX 7703368 intron CHES-1-like - chrX_7_7700001 chrX_7700001 RAL-26 1437 chrX 7720554 7720575 chrX 7720637 7720657 5 81 2.0 1.0 1.5 2.0 103 chrX 7720554 intergenic not near genes chrX 7720606 intergenic not near genes chrX 7720657 intergenic not near genes chrX_5_7720001 chrX_7720001 RAL-26 1438 chrX 7832439 7832465 chrX 7832527 7832552 4 88 0.0 2.5 1.2 1.8 113 chrX 7832439 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832552 intron CG1402 + chrX_4_7830001 chrX_7830001 RAL-26 1439 chrX 7881848 7881874 chrX 7881930 7881956 5 80 1.0 0.5 0.8 2.8 108 chrX 7881848 intergenic Ir7f -,Ir7e - chrX 7881902 intergenic Ir7f -,Ir7e - chrX 7881956 3` UTR Ir7f - chrX_5_7880001 chrX_7880001 RAL-26 1440 chrX 8014742 8014761 chrX 8014820 8014839 4 78 2.0 3.5 2.8 1.1 97 chrX 8014742 intron Tbh + chrX 8014790 intron Tbh + chrX 8014839 intron Tbh + chrX_4_8010001 chrX_8010001 RAL-26 1441 chrX 8063734 8063766 chrX 8063833 8063863 5 91 0.5 4.0 2.2 1.6 129 chrX 8063734 intron mys + chrX 8063798 intron mys + chrX 8063863 5` UTR mys + chrX_5_8060001 chrX_8060001 RAL-26 1442 chrX 8085574 8085603 chrX 8085660 8085689 8 86 1.5 0.0 0.8 4.4 115 chrX 8085574 intron,5` UTR CG2256 -,CR45535 + chrX 8085632 intron,5` UTR CG2256 -,CR45535 + chrX 8085689 intron,5` UTR CG2256 -,CR45535 + chrX_8_8085001 chrX_8085001 RAL-26 1443 chrX 8092293 8092319 chrX 8092378 8092404 6 83 0.5 1.5 1.0 3.0 111 chrX 8092293 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092404 intron Ubc-E2H - chrX_6_8090001 chrX_8090001 RAL-26 1444 chrX 8161580 8161608 chrX 8161661 8161688 10 80 1.5 4.5 3.0 2.5 108 chrX 8161580 3` UTR CG10761 - chrX 8161634 3` UTR CG10761 - chrX 8161688 exon CG10761 - chrX_10_8160001 chrX_8160001 RAL-26 1445 chrX 8311539 8311547 chrX 8311619 8311623 4 79 2.5 1.5 2.0 1.3 84 chrX 8311539 intron nAChRalpha3 - chrX 8311581 intron nAChRalpha3 - chrX 8311623 intron nAChRalpha3 - chrX_4_8310001 chrX_8310001 RAL-26 1446 chrX 8378248 8378269 chrX 8378331 8378352 6 83 3.0 1.5 2.2 1.9 104 chrX 8378248 intergenic not near genes chrX 8378300 intergenic not near genes chrX 8378352 intergenic not near genes chrX_6_8375001 chrX_8375001 RAL-26 1447 chrX 8421481 8421492 chrX 8421573 8421583 7 92 3.0 2.5 2.8 1.8 102 chrX 8421481 intron Trf2 + chrX 8421532 intron Trf2 + chrX 8421583 intron Trf2 + chrX_7_8420001 chrX_8420001 RAL-26 1448 chrX 8772237 8772252 chrX 8772326 8772341 5 89 5.5 5.5 5.5 0.8 104 chrX 8772237 intron Lim1 - chrX 8772289 intron Lim1 - chrX 8772341 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-26 1449 chrX 8922328 8922347 chrX 8922762 8922776 jockey 7 433 5.0 2.5 3.8 1.5 448 chrX 8922328 intron rdgA + chrX 8922552 intron rdgA + chrX 8922776 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-26 1450 chrX 9575798 9575820 chrX 9576116 9576144 mdg3 5 321 5.0 3.5 4.2 1.0 346 chrX 9575798 intron,exon CG32699 -,CG42395 - chrX 9575971 intron,intron CG32699 -,CG42395 - chrX 9576144 intron,5` UTR CG32699 -,CG42395 - chrX_5_9575001 chrX_9575001 RAL-26 1451 chrX 9594628 9594660 chrX 9595222 9595254 12 595 16.0 23.0 19.5 0.6 626 chrX 9594628 intergenic CR45543 + chrX 9594941 intergenic CR45543 + chrX 9595254 5` UTR CR45543 + chrX_12_9590001 chrX_9590001 RAL-26 1452 chrX 9595359 9595381 chrX 9595444 9595466 8 84 2.0 4.5 3.2 1.9 107 chrX 9595359 5` UTR CR45543 + chrX 9595412 5` UTR CR45543 + chrX 9595466 5` UTR CR45543 + chrX_8_9595001 chrX_9595001 RAL-26 1453 chrX 9599173 9599197 chrX 9599251 9599275 10 78 4.0 4.5 4.2 1.9 102 chrX 9599173 intergenic not near genes chrX 9599224 intergenic not near genes chrX 9599275 intergenic not near genes chrX_10_9595001 chrX_9595001 RAL-26 1454 chrX 9791864 9791891 chrX 9791961 9791988 5 97 0.5 3.5 2.0 1.7 124 chrX 9791864 intron CG32698 + chrX 9791926 intron CG32698 + chrX 9791988 intron CG32698 + chrX_5_9790001 chrX_9790001 RAL-26 1455 chrX 10382666 10382675 chrX 10382748 10382757 4 82 1.5 3.0 2.2 1.2 91 chrX 10382666 exon CG17841 + chrX 10382712 3` UTR CG17841 + chrX 10382757 3` UTR CG17841 + chrX_4_10380001 chrX_10380001 RAL-26 1456 chrX 10550856 10550885 chrX 10552322 10552351 hobo 8 1466 0.5 4.5 2.5 2.3 1495 chrX 10550856 intron spri - chrX 10551604 intron spri - chrX 10552351 intron spri - chrX_8_10550001 chrX_10550001 RAL-26 1457 chrX 10675276 10675310 chrX 10675639 10675673 6 363 1.5 2.0 1.8 2.1 397 chrX 10675276 intron X11Lbeta + chrX 10675474 intron X11Lbeta + chrX 10675673 intron X11Lbeta + chrX_6_10675001 chrX_10675001 RAL-26 1458 chrX 10811865 10811895 chrX 10811957 10811987 8 92 0.0 0.0 0.0 8.0 122 chrX 10811865 intron Imp - chrX 10811926 intron Imp - chrX 10811987 intron Imp - chrX_8_10810001 chrX_10810001 RAL-26 1459 chrX 11096005 11096025 chrX 11103107 11103127 HMS-Beagle 4 7101 0.5 0.5 0.5 2.7 7122 chrX 11096005 intergenic not near genes chrX 11099566 intergenic not near genes chrX 11103127 intron CG42249 + chrX_4_11095001 chrX_11095001 RAL-26 1460 chrX 11254174 11254184 chrX 11254285 11254295 4 111 3.0 4.5 3.8 0.8 121 chrX 11254174 intron CG44422 - chrX 11254234 intron CG44422 - chrX 11254295 intron CG44422 - chrX_4_11250001 chrX_11250001 RAL-26 1461 chrX 11268560 11268584 chrX 11270053 11270077 hopper2 7 1493 2.0 0.0 1.0 3.5 1517 chrX 11268560 intron CG44422 - chrX 11269318 intron CG44422 - chrX 11270077 intron CG44422 - chrX_7_11265001 chrX_11265001 RAL-26 1462 chrX 11305776 11305799 chrX 11305885 11305908 4 106 0.5 1.5 1.0 2.0 132 chrX 11305776 intergenic not near genes chrX 11305842 intergenic not near genes chrX 11305908 intergenic not near genes chrX_4_11305001 chrX_11305001 RAL-26 1463 chrX 11633418 11633442 chrX 11640471 11640496 297 5 7054 1.0 2.5 1.8 1.8 7078 chrX 11633418 intron Ptp10D + chrX 11636957 intron Ptp10D + chrX 11640496 intron Ptp10D + chrX_5_11635001 chrX_11635001 RAL-26 1464 chrX 11936578 11936584 chrX 11936677 11936683 5 99 0.0 4.0 2.0 1.7 105 chrX 11936578 intron cac - chrX 11936630 intron cac - chrX 11936683 intron cac - chrX_5_11935001 chrX_11935001 RAL-26 1465 chrX 12069063 12069088 chrX 12069150 12069151 13 85 0.5 2.0 1.2 5.9 88 chrX 12069063 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069107 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069151 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX_13_12065001 chrX_12065001 RAL-26 1466 chrX 12094044 12094066 chrX 12094136 12094158 5 92 1.0 2.0 1.5 2.0 114 chrX 12094044 intron,intron CR43960 +,Ten-a + chrX 12094101 intron,intron CR43960 +,Ten-a + chrX 12094158 intron,intron CR43960 +,Ten-a + chrX_5_12090001 chrX_12090001 RAL-26 1467 chrX 12176746 12176760 chrX 12176819 12176829 7 74 2.5 4.5 3.5 1.6 83 chrX 12176746 intron,3` UTR Ten-a +,CG1924 - chrX 12176788 intron,3` UTR Ten-a +,CG1924 - chrX 12176829 intron,3` UTR Ten-a +,CG1924 - chrX_7_12175001 chrX_12175001 RAL-26 1468 chrX 12301962 12301989 chrX 12303267 12303295 X-element 8 1306 3.0 1.0 2.0 2.7 1333 chrX 12301962 intron Ten-a + chrX 12302628 intron Ten-a + chrX 12303295 intron Ten-a + chrX_8_12300001 chrX_12300001 RAL-26 1469 chrX 12350776 12350806 chrX 12350857 12350887 9 80 1.0 0.0 0.5 6.0 111 chrX 12350776 intergenic not near genes chrX 12350832 intergenic not near genes chrX 12350887 intergenic not near genes chrX_9_12350001 chrX_12350001 RAL-26 1470 chrX 12499940 12499957 chrX 12500074 12500091 4 134 2.0 0.5 1.2 1.8 151 chrX 12499940 intron CG2556 + chrX 12500016 intron CG2556 + chrX 12500091 intron CG2556 + chrX_4_12500001 chrX_12500001 RAL-26 1471 chrX 12839925 12839949 chrX 12840250 12840275 4 326 2.0 1.0 1.5 1.6 350 chrX 12839925 intron Pde9 - chrX 12840100 intron Pde9 - chrX 12840275 intron Pde9 - chrX_4_12840001 chrX_12840001 RAL-26 1472 chrX 13061355 13061370 chrX 13061463 13061481 5 110 2.0 2.0 2.0 1.7 126 chrX 13061355 intron rad + chrX 13061418 intron rad + chrX 13061481 intron rad + chrX_5_13060001 chrX_13060001 RAL-26 1473 chrX 13172351 13172371 chrX 13172427 13172447 5 76 3.0 2.5 2.8 1.3 96 chrX 13172351 exon CG34411 - chrX 13172399 intron CG34411 - chrX 13172447 intron CG34411 - chrX_5_13170001 chrX_13170001 RAL-26 1474 chrX 13236886 13236901 chrX 13236971 13236986 4 85 0.0 0.0 0.0 4.0 100 chrX 13236886 intron mew - chrX 13236936 intron mew - chrX 13236986 intron mew - chrX_4_13235001 chrX_13235001 RAL-26 1475 chrX 13374847 13374867 chrX 13374921 13374947 6 79 0.5 0.0 0.2 5.0 100 chrX 13374847 intron CG1640 + chrX 13374897 intron CG1640 + chrX 13374947 intron CG1640 + chrX_6_13370001 chrX_13370001 RAL-26 1476 chrX 13908798 13908811 chrX 13908876 13908889 7 78 3.0 3.5 3.2 1.7 91 chrX 13908798 intron mamo - chrX 13908844 intron mamo - chrX 13908889 intron mamo - chrX_7_13905001 chrX_13905001 RAL-26 1477 chrX 13915430 13915458 chrX 13915562 13915590 4 132 0.0 0.5 0.2 3.3 160 chrX 13915430 intron mamo - chrX 13915510 intron mamo - chrX 13915590 intron mamo - chrX_4_13915001 chrX_13915001 RAL-26 1478 chrX 13975883 13975902 chrX 13975960 13975979 6 77 0.0 3.0 1.5 2.4 96 chrX 13975883 intron mamo - chrX 13975931 intron mamo - chrX 13975979 intron mamo - chrX_6_13975001 chrX_13975001 RAL-26 1479 chrX 14105023 14105053 chrX 14114174 14114204 roo 12 9151 3.5 5.5 4.5 2.2 9181 chrX 14105023 intergenic not near genes chrX 14109614 intergenic not near genes chrX 14114204 5` UTR CR44657 + chrX_12_14105001 chrX_14105001 RAL-26 1480 chrX 14131492 14131522 chrX 14131573 14131603 8 80 1.0 5.5 3.2 1.9 111 chrX 14131492 intergenic not near genes chrX 14131548 intergenic not near genes chrX 14131603 intergenic not near genes chrX_8_14130001 chrX_14130001 RAL-26 1481 chrX 14163793 14163819 chrX 14167037 14167063 8 3244 11.5 13.5 12.5 0.6 3270 chrX 14163793 intergenic not near genes chrX 14165428 intergenic not near genes chrX 14167063 intergenic not near genes chrX_8_14165001 chrX_14165001 RAL-26 1482 chrX 14189877 14189892 chrX 14189971 14189987 4 95 4.0 2.0 3.0 1.0 110 chrX 14189877 exon CG11585 + chrX 14189932 exon CG11585 + chrX 14189987 exon CG11585 + chrX_4_14185001 chrX_14185001 RAL-26 1483 chrX 14296456 14296489 chrX 14296532 14296565 6 75 1.0 1.0 1.0 3.0 109 chrX 14296456 intergenic not near genes chrX 14296510 intergenic not near genes chrX 14296565 intergenic not near genes chrX_6_14295001 chrX_14295001 RAL-26 1484 chrX 14333302 14333317 chrX 14333367 14333399 4 78 1.5 2.5 2.0 1.3 97 chrX 14333302 intron dpr8 + chrX 14333350 intron dpr8 + chrX 14333399 intron dpr8 + chrX_4_14330001 chrX_14330001 RAL-26 1485 chrX 14767960 14767977 chrX 14768040 14768057 5 78 2.5 0.0 1.2 2.3 97 chrX 14767960 intergenic not near genes chrX 14768008 intergenic not near genes chrX 14768057 intergenic not near genes chrX_5_14765001 chrX_14765001 RAL-26 1486 chrX 14778026 14778059 chrX 14782823 14782856 Doc 4 4797 0.5 2.0 1.2 1.8 4830 chrX 14778026 intergenic CG5347 + chrX 14780441 intergenic not near genes chrX 14782856 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-26 1487 chrX 14952439 14952460 chrX 14952605 14952628 5 168 2.0 2.0 2.0 1.7 189 chrX 14952439 intron,3` UTR pdgy -,CR44831 - chrX 14952534 intron,3` UTR pdgy -,CR44831 - chrX 14952628 intron,3` UTR pdgy -,CR44831 - chrX_5_14950001 chrX_14950001 RAL-26 1488 chrX 14989282 14989299 chrX 14989924 14989940 5 641 3.0 3.5 3.2 1.2 658 chrX 14989282 intron eag + chrX 14989611 intron eag + chrX 14989940 intron eag + chrX_5_14985001 chrX_14985001 RAL-26 1489 chrX 15183483 15183507 chrX 15183562 15183567 4 75 2.0 1.5 1.8 1.4 84 chrX 15183483 intron CG43737 + chrX 15183525 intron CG43737 + chrX 15183567 intron CG43737 + chrX_4_15180001 chrX_15180001 RAL-26 1490 chrX 15237864 15237890 chrX 15237947 15237973 7 81 3.5 2.5 3.0 1.8 109 chrX 15237864 intergenic not near genes chrX 15237918 intergenic not near genes chrX 15237973 intergenic not near genes chrX_7_15235001 chrX_15235001 RAL-26 1491 chrX 15273710 15273738 chrX 15274877 15274905 1360 11 1167 3.0 7.0 5.0 1.8 1195 chrX 15273710 intergenic not near genes chrX 15274308 intergenic not near genes chrX 15274905 intergenic not near genes chrX_11_15270001 chrX_15270001 RAL-26 1492 chrX 15413050 15413084 chrX 15417352 15417386 Juan 12 4301 2.5 2.0 2.2 3.8 4336 chrX 15413050 intron Cngl - chrX 15415218 intron Cngl - chrX 15417386 intron Cngl - chrX_12_15415001 chrX_15415001 RAL-26 1493 chrX 15519797 15519817 chrX 15519875 15519895 4 78 1.0 2.0 1.5 1.6 98 chrX 15519797 intron Ac13E - chrX 15519846 intron Ac13E - chrX 15519895 intron Ac13E - chrX_4_15515001 chrX_15515001 RAL-26 1494 chrX 15536699 15536711 chrX 15536776 15536786 5 77 12.5 9.5 11.0 0.4 87 chrX 15536699 intron Ac13E - chrX 15536742 intron Ac13E - chrX 15536786 intron Ac13E - chrX_5_15535001 chrX_15535001 RAL-26 1495 chrX 15543268 15543279 chrX 15543350 15543361 7 82 6.0 4.0 5.0 1.2 93 chrX 15543268 intron Ac13E - chrX 15543314 intron Ac13E - chrX 15543361 intron Ac13E - chrX_7_15540001 chrX_15540001 RAL-26 1496 chrX 15543284 15543295 chrX 15543344 15543367 4 72 3.0 3.0 3.0 1.0 83 chrX 15543284 intron Ac13E - chrX 15543326 intron Ac13E - chrX 15543367 intron Ac13E - chrX_4_15540001 chrX_15540001 RAL-26 1497 chrX 15589437 15589460 chrX 15589616 15589638 5 178 0.5 5.0 2.8 1.3 201 chrX 15589437 intron CG9220 - chrX 15589538 intron CG9220 - chrX 15589638 exon CG9220 - chrX_5_15585001 chrX_15585001 RAL-26 1498 chrX 16100560 16100563 chrX 16100639 16100642 4 78 2.0 2.0 2.0 1.3 82 chrX 16100560 intron,intron CG42353 -,CG42354 - chrX 16100601 intron,intron CG42353 -,CG42354 - chrX 16100642 intron,intron CG42353 -,CG42354 - chrX_4_16100001 chrX_16100001 RAL-26 1499 chrX 16476584 16476604 chrX 16476660 16476680 5 76 2.5 0.0 1.2 2.3 96 chrX 16476584 intron para - chrX 16476632 intron para - chrX 16476680 intron para - chrX_5_16475001 chrX_16475001 RAL-26 1500 chrX 16492649 16492670 chrX 16498226 16498247 mdg3 4 5576 1.5 2.0 1.8 1.4 5598 chrX 16492649 intron para - chrX 16495448 intron para - chrX 16498247 intron para - chrX_4_16495001 chrX_16495001 RAL-26 1501 chrX 16540751 16540776 chrX 16540829 16540854 6 78 3.0 4.0 3.5 1.3 103 chrX 16540751 exon CG9903 - chrX 16540802 5` UTR CG9903 - chrX 16540854 intergenic CG9903 - chrX_6_16540001 chrX_16540001 RAL-26 1502 chrX 16689634 16689654 chrX 16689718 16689740 7 82 5.0 5.5 5.2 1.1 106 chrX 16689634 intron Sep4 - chrX 16689687 intron Sep4 - chrX 16689740 intron Sep4 - chrX_7_16685001 chrX_16685001 RAL-26 1503 chrX 16690452 16690472 chrX 16690531 16690551 9 78 2.0 2.5 2.2 2.8 99 chrX 16690452 intron Sep4 - chrX 16690502 intron Sep4 - chrX 16690551 intron Sep4 - chrX_9_16690001 chrX_16690001 RAL-26 1504 chrX 16833205 16833216 chrX 16833290 16833301 4 85 2.0 0.0 1.0 2.0 96 chrX 16833205 intron CG13004 - chrX 16833253 intron CG13004 - chrX 16833301 intron CG13004 - chrX_4_16830001 chrX_16830001 RAL-26 1505 chrX 16951320 16951353 chrX 16951400 16951433 13 77 2.0 2.5 2.2 4.1 113 chrX 16951320 exon RhoGAP15B + chrX 16951376 exon RhoGAP15B + chrX 16951433 exon RhoGAP15B + chrX_13_16950001 chrX_16950001 RAL-26 1506 chrX 17373372 17373387 chrX 17373470 17373485 5 98 1.5 3.0 2.2 1.6 113 chrX 17373372 intergenic not near genes chrX 17373428 intergenic not near genes chrX 17373485 intergenic not near genes chrX_5_17370001 chrX_17370001 RAL-26 1507 chrX 17556945 17556971 chrX 17557444 17557451 mdg1 5 494 2.0 3.5 2.8 1.3 506 chrX 17556945 intron CG43658 - chrX 17557198 intron CG43658 - chrX 17557451 intron CG43658 - chrX_5_17555001 chrX_17555001 RAL-26 1508 chrX 17680892 17680920 chrX 17680968 17680996 12 77 1.5 5.5 3.5 2.7 104 chrX 17680892 intron chas - chrX 17680944 intron chas - chrX 17680996 intron chas - chrX_12_17680001 chrX_17680001 RAL-26 1509 chrX 18040432 18040461 chrX 18040520 18040549 6 88 0.0 1.0 0.5 4.0 117 chrX 18040432 intron Sh - chrX 18040490 intron Sh - chrX 18040549 intron Sh - chrX_6_18040001 chrX_18040001 RAL-26 1510 chrX 18043587 18043611 chrX 18043668 18043692 7 78 0.5 2.5 1.5 2.8 105 chrX 18043587 intron Sh - chrX 18043640 intron Sh - chrX 18043692 intron Sh - chrX_7_18040001 chrX_18040001 RAL-26 1511 chrX 18126604 18126825 chrX 18126726 18126902 7 103 1.5 0.5 1.0 3.5 298 chrX 18126604 intron CG32553 - chrX 18126753 intron CG32553 - chrX 18126902 intron CG32553 - chrX_7_18125001 chrX_18125001 RAL-26 1512 chrX 18486108 18486139 chrX 18486197 18486228 7 87 5.0 7.0 6.0 1.0 120 chrX 18486108 exon psh - chrX 18486168 intron psh - chrX 18486228 intron psh - chrX_7_18485001 chrX_18485001 RAL-26 1513 chrX 18558784 18558799 chrX 18558866 18558881 5 82 0.0 0.5 0.2 4.2 97 chrX 18558784 intron Bx + chrX 18558832 intron Bx + chrX 18558881 intron Bx + chrX_5_18555001 chrX_18555001 RAL-26 1514 chrX 18896528 18896545 chrX 18896639 18896656 5 111 0.5 2.5 1.5 2.0 128 chrX 18896528 3` UTR CG7349 + chrX 18896592 intergenic CG7349 + chrX 18896656 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-26 1515 chrX 18910958 18910973 chrX 18911044 18911060 6 86 2.5 1.5 2.0 2.0 102 chrX 18910958 3` UTR CG7378 + chrX 18911009 3` UTR CG7378 + chrX 18911060 3` UTR CG7378 + chrX_6_18910001 chrX_18910001 RAL-26 1516 chrX 18947506 18947535 chrX 18947598 18947628 4 93 1.5 1.0 1.2 1.8 122 chrX 18947506 intron CG43759 + chrX 18947567 intron CG43759 + chrX 18947628 intron CG43759 + chrX_4_18945001 chrX_18945001 RAL-26 1517 chrX 19084099 19084117 chrX 19084219 19084237 4 120 0.0 0.5 0.2 3.3 138 chrX 19084099 intergenic CR45503 + chrX 19084168 intergenic CR45503 + chrX 19084237 intergenic CR45503 + chrX_4_19080001 chrX_19080001 RAL-26 1518 chrX 19109114 19109122 chrX 19109298 19109306 4 184 0.0 3.0 1.5 1.6 192 chrX 19109114 intergenic not near genes chrX 19109210 intergenic not near genes chrX 19109306 intergenic not near genes chrX_4_19105001 chrX_19105001 RAL-26 1519 chrX 19124435 19124444 chrX 19124523 19124532 5 88 1.0 0.0 0.5 3.3 97 chrX 19124435 intergenic CG15882 - chrX 19124484 intergenic CG15882 - chrX 19124532 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-26 1520 chrX 19222725 19222753 chrX 19223108 19223137 6 384 2.5 4.5 3.5 1.3 412 chrX 19222725 intron CG7884 + chrX 19222931 intron CG7884 + chrX 19223137 intron CG7884 + chrX_6_19220001 chrX_19220001 RAL-26 1521 chrX 13057298 13057300 chrX 19242812 19242814 5 6185514 1.5 2.0 1.8 1.8 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_5_16150001 chrX_16150001 RAL-26 1522 chrX 19461161 19461174 chrX 19461257 19461270 5 96 0.5 2.5 1.5 2.0 109 chrX 19461161 intron kek5 + chrX 19461216 intron kek5 + chrX 19461270 intron kek5 + chrX_5_19460001 chrX_19460001 RAL-26 1523 chrX 19472124 19472156 chrX 19472694 19472726 jockey 6 570 2.0 3.0 2.5 1.7 602 chrX 19472124 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472726 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-26 1524 chrX 19662033 19662051 chrX 19662256 19662274 4 223 0.5 1.0 0.8 2.2 241 chrX 19662033 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662274 intron CG14223 - chrX_4_19660001 chrX_19660001 RAL-26 1525 chrX 19822827 19822840 chrX 19822994 19823007 5 165 8.0 1.5 4.8 0.9 180 chrX 19822827 intergenic not near genes chrX 19822917 intergenic skpE - chrX 19823007 intergenic skpE - chrX_5_19820001 chrX_19820001 RAL-26 1526 chrX 19881454 19881470 chrX 19881535 19881551 4 81 0.5 0.0 0.2 3.3 97 chrX 19881454 intron Hers + chrX 19881502 intron Hers + chrX 19881551 intron Hers + chrX_4_19880001 chrX_19880001 RAL-26 1527 chrX 19992417 19992437 chrX 19992493 19992513 7 76 4.5 5.0 4.8 1.2 96 chrX 19992417 intergenic not near genes chrX 19992465 intergenic not near genes chrX 19992513 intergenic not near genes chrX_7_19990001 chrX_19990001 RAL-26 1528 chrX 20043530 20043548 chrX 20043614 20043632 4 84 3.5 1.5 2.5 1.1 102 chrX 20043530 intron Dop2R - chrX 20043581 intron Dop2R - chrX 20043632 intron Dop2R - chrX_4_20040001 chrX_20040001 RAL-26 1529 chrX 20070266 20070285 chrX 20070347 20070366 6 81 0.0 1.5 0.8 3.3 100 chrX 20070266 intergenic not near genes chrX 20070316 intergenic not near genes chrX 20070366 intergenic not near genes chrX_6_20070001 chrX_20070001 RAL-26 1530 chrX 20088325 20088346 chrX 20088410 20088431 9 85 1.5 7.0 4.2 1.7 106 chrX 20088325 intergenic not near genes chrX 20088378 intergenic not near genes chrX 20088431 intergenic not near genes chrX_9_20085001 chrX_20085001 RAL-26 1531 chrX 20105195 20105229 chrX 20105299 20105333 12 107 27.5 25.0 26.2 0.4 138 chrX 20105195 intergenic not near genes chrX 20105264 intergenic not near genes chrX 20105333 intergenic not near genes chrX_12_20105001 chrX_20105001 RAL-26 1532 chrX 20374105 20374128 chrX 20374181 20374198 5 75 0.5 3.0 1.8 1.8 93 chrX 20374105 intergenic not near genes chrX 20374152 intergenic not near genes chrX 20374198 intergenic not near genes chrX_5_20370001 chrX_20370001 RAL-26 1533 chrX 20377328 20377336 chrX 20378795 20378801 hobo 5 1467 6.0 6.5 6.2 0.7 1473 chrX 20377328 intergenic not near genes chrX 20378064 intergenic not near genes chrX 20378801 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-26 1534 chrX 20386833 20386847 chrX 20386917 20386933 6 84 0.0 1.0 0.5 4.0 100 chrX 20386833 intergenic not near genes chrX 20386883 intergenic not near genes chrX 20386933 intergenic not near genes chrX_6_20385001 chrX_20385001 RAL-26 1535 chrX 20426180 20426205 chrX 20428374 20428400 9 2197 26.5 18.5 22.5 0.4 2220 chrX 20426180 exon cactin + chrX 20427290 intergenic CG11710 -,CG15456 - chrX 20428400 exon CG11710 - chrX_9_20425001 chrX_20425001 RAL-26 1536 chrX 20559661 20559689 chrX 20559752 20559781 4 92 1.5 0.0 0.8 2.2 120 chrX 20559661 intron RunxB + chrX 20559721 intron RunxB + chrX 20559781 intron RunxB + chrX_4_20555001 chrX_20555001 RAL-26 1537 chrX 20578073 20578105 chrX 20578152 20578184 4 79 0.5 0.0 0.2 3.3 111 chrX 20578073 intergenic not near genes chrX 20578128 intergenic not near genes chrX 20578184 intergenic not near genes chrX_4_20575001 chrX_20575001 RAL-26 1538 chrX 20583730 20583758 chrX 20583901 20583929 4 171 1.0 0.0 0.5 2.7 199 chrX 20583730 intergenic not near genes chrX 20583830 intergenic not near genes chrX 20583929 intergenic not near genes chrX_4_20580001 chrX_20580001 RAL-26 1539 chrX 20713917 20713929 chrX 20714000 20714010 4 82 1.5 1.0 1.2 1.8 93 chrX 20713917 intergenic not near genes chrX 20713964 intergenic not near genes chrX 20714010 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-26 1540 chrX 20940720 20940737 chrX 20942189 20942206 hobo 5 1469 5.0 4.0 4.5 0.9 1486 chrX 20940720 intergenic not near genes chrX 20941463 intergenic not near genes chrX 20942206 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-26 1541 chrX 21042560 21042587 chrX 21045345 21045372 9 2785 23.0 27.0 25.0 0.3 2812 chrX 21042560 exon Mgstl + chrX 21043966 exon,3` UTR Mgstl +,CR44431 - chrX 21045372 intron Cbs + chrX_9_21040001 chrX_21040001 RAL-26 1542 chrX 21254652 21254666 chrX 21255568 21255577 hopper2 5 915 2.5 0.0 1.2 2.3 925 chrX 21254652 intron CG32521 - chrX 21255114 intron CG32521 - chrX 21255577 intron CG32521 - chrX_5_21255001 chrX_21255001 RAL-26 1543 chrX 21449254 21449260 chrX 21449347 21449353 4 92 2.5 7.0 4.8 0.7 99 chrX 21449254 intron CG42343 - chrX 21449304 intron CG42343 - chrX 21449353 intron CG42343 - chrX_4_21445001 chrX_21445001 RAL-26 1544 chrX 21458696 21458713 chrX 21464132 21464148 Ivk 4 5436 1.0 2.0 1.5 1.6 5452 chrX 21458696 intergenic not near genes chrX 21461422 intergenic not near genes chrX 21464148 intergenic not near genes chrX_4_21460001 chrX_21460001 RAL-26 1545 chrX 22478883 22478893 chrX 22479016 22479026 5 133 0.0 0.5 0.2 4.2 143 chrX 22478883 intron CG12576 - chrX 22478954 intron CG12576 - chrX 22479026 intron CG12576 - chrX_5_22475001 chrX_22475001 RAL-26 1546 chrX 22660574 22660591 chrX 22660658 22660675 6 84 2.5 0.0 1.2 2.7 101 chrX 22660574 intron CR44997 + chrX 22660624 intron CR44997 + chrX 22660675 intron CR44997 + chrX_6_22660001 chrX_22660001 RAL-26 1547 chrX 22867983 22868005 chrX 22868097 22868119 5 114 3.5 0.0 1.8 1.8 136 chrX 22867983 exon CG42346 + chrX 22868051 intron CG42346 + chrX 22868119 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-26 1548 chrX 22870877 22870901 chrX 22870968 22870992 8 91 2.5 6.0 4.2 1.5 115 chrX 22870877 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22870992 intron,3` UTR CG42346 +,CR43656 - chrX_8_22870001 chrX_22870001 RAL-26 1549 chrX 22996308 22996339 chrX 23003542 23003573 roo 4 7234 1.0 2.5 1.8 1.4 7265 chrX 22996308 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003573 intron,intron stnA -,stnB - chrX_4_22995001 chrX_22995001 RAL-26 1550 chrY 975596 975822 chrY 975713 975929 7 107 94.5 89.0 91.8 0.1 333 chrY 975596 intergenic not near genes chrY 975762 intergenic not near genes chrY 975929 intergenic not near genes chrY_7_975001 chrY_975001 RAL-26