SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	80304	80388	Max-element	8239	301	14	84	'10-4	61.97	4.3	2.6	intergenic	not near genes	chr2L_14_80001	chr2L_80001	0.71	RAL-227
2	chr2L	479832	479879	P-element	22	2881	10	47	'3-7	44.21	3.9	2.0	intron	ush +	chr2L_10_475001	chr2L_475001	0.30	RAL-227
3	chr2L	549918	549991	mdg3	5491	5251	5	73	'2-3	64.41	4.7	0.9	intron	Ets21C -	chr2L_5_545001	chr2L_545001	0.40	RAL-227
4	chr2L	963179	963255	Tabor	4	7323	11	76	'9-2	61.04	2.9	2.8	intergenic	not near genes	chr2L_11_960001	chr2L_960001	0.82	RAL-227
5	chr2L	1086764	1086833	hobo	3	2936	15	69	'12-3	63.81	2.8	3.9	intron	CG4629 -	chr2L_15_1085001	chr2L_1085001	0.80	RAL-227
6	chr2L	1495514	1495574	opus	7022	7498	13	60	'2-11	65.92	2.2	4.1	5` UTR	CG31926 +	chr2L_13_1495001	chr2L_1495001	0.15	RAL-227
7	chr2L	2004858	2004883	jockey	4760	4785	8	25	'4-4	60.01	2.5	2.3	intron	CG33543 -	chr2L_8_2000001	chr2L_2000001	0.50	RAL-227
8	chr2L	2168191	2168219	mdg3	29	5251	9	28	'7-2	61.21	4.1	1.8	intron	aop -	chr2L_9_2165001	chr2L_2165001	0.78	RAL-227
9	chr2L	2845956	2845980	mdg3	5469	5493	5	24	'3-2	65.31	3.5	1.1	3` UTR	CG3117 -	chr2L_5_2845001	chr2L_2845001	0.60	RAL-227
10	chr2L	3681234	3681306	Max-element	8	290	6	72	'4-2	62.75	3.3	1.4	intron	CG34340 +	chr2L_6_3680001	chr2L_3680001	0.67	RAL-227
11	chr2L	4290864	4290942	roo	8664	408	12	78	'6-6	64.78	4.0	2.4	intron	tutl +	chr2L_12_4290001	chr2L_4290001	0.50	RAL-227
12	chr2L	4345878	4345913	BS	5080	5009	6	35	'2-4	58.35	1.8	2.1	intergenic	Atet +	chr2L_6_4345001	chr2L_4345001	0.33	RAL-227
13	chr2L	4434772	4434839	mdg3	5253	233	11	67	'8-3	65.78	2.0	3.7	intron,intron,intron	CG15431 -,CG34177 +,CG34178 +	chr2L_11_4430001	chr2L_4430001	0.73	RAL-227
14	chr2L	4600706	4600788	blood	7363	7011	13	82	'5-8	67.24	3.1	3.2	intron	dp -	chr2L_13_4600001	chr2L_4600001	0.38	RAL-227
15	chr2L	5108407	5108461	P-element	2864	1	7	54	'3-4	47.43	1.0	3.5	intron	Msp300 +	chr2L_7_5105001	chr2L_5105001	0.43	RAL-227
16	chr2L	5724312	5724373	1360	3380	9	12	61	'7-5	61.27	0.0	12.0	intergenic	CG11030 +,sip1 +	chr2L_12_5720001	chr2L_5720001	0.58	RAL-227
17	chr2L	5790865	5790939	FB	2	1	9	74	'4-5	59.99	2.9	2.3	intron	CG9171 -	chr2L_9_5790001	chr2L_5790001	0.44	RAL-227
18	chr2L	6305358	6305429	mdg3	5258	5498	8	71	'7-1	63.48	3.5	1.8	intron	Ddr +	chr2L_8_6305001	chr2L_6305001	0.88	RAL-227
19	chr2L	6455205	6455224	P-element	2853	2872	5	19	'3-2	40.19	5.0	0.8	intron	retm -	chr2L_5_6455001	chr2L_6455001	0.60	RAL-227
20	chr2L	6806125	6806193	roo	7	405	9	68	'7-2	65.91	3.8	1.9	intergenic	CG17375 -	chr2L_9_6805001	chr2L_6805001	0.78	RAL-227
21	chr2L	7004077	7004143	roo	8670	400	13	66	'9-4	68.63	3.9	2.7	intron	uif -	chr2L_13_7000001	chr2L_7000001	0.69	RAL-227
22	chr2L	7576588	7576654	P-element	2	8	10	66	'7-3	47.50	2.5	2.9	intron	RapGAP1 -	chr2L_10_7575001	chr2L_7575001	0.70	RAL-227
23	chr2L	8104351	8104367	P-element	2883	2867	6	16	'5-1	62.44	2.7	1.6	intron	Bsg +	chr2L_6_8100001	chr2L_8100001	0.83	RAL-227
24	chr2L	8266048	8266117	Stalker2	5	396	12	69	'6-6	64.95	2.4	3.5	intron	Btk29A -	chr2L_12_8265001	chr2L_8265001	0.50	RAL-227
25	chr2L	8298955	8299035	S-element	1	1713	13	80	'7-6	66.02	3.8	2.7	intron	Btk29A -	chr2L_13_8295001	chr2L_8295001	0.54	RAL-227
26	chr2L	8609871	8609904	jockey	36	6	13	33	'9-4	60.70	4.3	2.5	intron	Sema-1a +	chr2L_13_8605001	chr2L_8605001	0.69	RAL-227
27	chr2L	8991529	8991595	mdg1	7038	406	7	66	'4-3	59.71	1.7	2.6	intergenic	CG9555 +	chr2L_7_8990001	chr2L_8990001	0.57	RAL-227
28	chr2L	9114222	9114280	Max-element	8523	8	5	58	'1-4	58.22	2.8	1.3	intergenic	not near genes	chr2L_5_9110001	chr2L_9110001	0.20	RAL-227
29	chr2L	9152807	9152881	roo	405	3	9	74	'4-5	55.50	2.0	3.0	intron	CG32982 +	chr2L_9_9150001	chr2L_9150001	0.44	RAL-227
30	chr2L	9304353	9304429	opus	496	7	8	76	'5-3	66.33	1.1	3.8	intergenic	CR42844 -	chr2L_8_9300001	chr2L_9300001	0.62	RAL-227
31	chr2L	9324104	9324153	412	479	7071	6	49	'3-3	59.11	4.4	1.1	intergenic	not near genes	chr2L_6_9320001	chr2L_9320001	0.50	RAL-227
32	chr2L	9376163	9376233	mdg1	7049	7459	10	70	'2-8	63.07	0.6	6.2	intron	Shawl -	chr2L_10_9375001	chr2L_9375001	0.20	RAL-227
33	chr2L	9699277	9699340	P-element	2875	2885	10	63	'6-4	43.75	2.4	2.9	5` UTR	Pka-C1 -	chr2L_10_9695001	chr2L_9695001	0.60	RAL-227
34	chr2L	9699581	9699657	pogo	5	2099	5	76	'2-3	64.17	1.7	1.9	intergenic	hoip +,Pka-C1 -	chr2L_5_9695001	chr2L_9695001	0.40	RAL-227
35	chr2L	10556293	10556376	roo	410	8663	17	83	'8-9	68.04	3.0	4.2	intron	Trim9 +	chr2L_17_10555001	chr2L_10555001	0.47	RAL-227
36	chr2L	10941811	10941875	Stalker4	400	7264	10	64	'4-6	57.38	2.9	2.6	intron	dpr2 -	chr2L_10_10940001	chr2L_10940001	0.40	RAL-227
37	chr2L	10941856	10941880	Stalker	327	7150	5	24	'3-2	59.32	3.8	1.0	intron	dpr2 -	chr2L_5_10940001	chr2L_10940001	0.60	RAL-227
38	chr2L	11058983	11059035	FB	12	12	6	52	'3-3	59.39	2.6	1.7	intron	Samuel -	chr2L_6_11055001	chr2L_11055001	0.50	RAL-227
39	chr2L	11323333	11323418	Burdock	6389	6137	10	85	'7-3	60.26	0.1	9.1	intergenic	not near genes	chr2L_10_11320001	chr2L_11320001	0.70	RAL-227
40	chr2L	11554878	11554897	Max-element	8246	4	5	19	'2-3	57.28	1.1	2.4	intergenic	not near genes	chr2L_5_11550001	chr2L_11550001	0.40	RAL-227
41	chr2L	11576063	11576121	Stalker2	7248	7631	8	58	'6-2	63.86	3.1	2.0	intergenic	not near genes	chr2L_8_11575001	chr2L_11575001	0.75	RAL-227
42	chr2L	11950602	11950656	Transpac	29	311	9	54	'3-6	70.22	2.5	2.6	intergenic	not near genes	chr2L_9_11950001	chr2L_11950001	0.33	RAL-227
43	chr2L	11977247	11977326	mdg3	5498	5254	4	79	'3-1	65.00	4.0	0.8	intergenic	not near genes	chr2L_4_11975001	chr2L_11975001	0.75	RAL-227
44	chr2L	12134665	12134697	P-element	2854	2882	8	32	'5-3	49.60	4.4	1.5	intergenic	not near genes	chr2L_8_12130001	chr2L_12130001	0.62	RAL-227
45	chr2L	12800229	12800269	hobo	31	2932	5	40	'3-2	72.84	4.0	1.0	intergenic	not near genes	chr2L_5_12800001	chr2L_12800001	0.60	RAL-227
46	chr2L	12860349	12860412	hobo	2927	1	14	63	'5-9	65.26	3.3	3.3	intergenic	not near genes	chr2L_14_12860001	chr2L_12860001	0.36	RAL-227
47	chr2L	12865003	12865052	hopper	21	5	8	49	'2-6	65.12	2.3	2.4	intergenic	not near genes	chr2L_8_12865001	chr2L_12865001	0.25	RAL-227
48	chr2L	12909356	12909417	roo	5	394	7	61	'3-4	65.90	3.8	1.5	intergenic	not near genes	chr2L_7_12905001	chr2L_12905001	0.43	RAL-227
49	chr2L	12950532	12950580	hopper	5	30	6	48	'2-4	67.55	3.8	1.2	intergenic	not near genes	chr2L_6_12950001	chr2L_12950001	0.33	RAL-227
50	chr2L	12982800	12982870	412	494	12	11	70	'7-4	59.71	4.0	2.2	intergenic	not near genes	chr2L_11_12980001	chr2L_12980001	0.64	RAL-227
51	chr2L	13038267	13038324	hobo	2922	4	13	57	'7-6	61.00	4.1	2.5	intron	CG9932 -	chr2L_13_13035001	chr2L_13035001	0.54	RAL-227
52	chr2L	13147277	13147302	HMS-Beagle2	21	6883	8	25	'5-3	62.45	1.6	3.1	intergenic	CR44199 +	chr2L_8_13145001	chr2L_13145001	0.62	RAL-227
53	chr2L	13348202	13348272	mdg3	5255	5493	6	70	'4-2	64.41	6.8	0.8	exon	CG16826 +	chr2L_6_13345001	chr2L_13345001	0.67	RAL-227
54	chr2L	13565231	13565289	mdg3	5478	5254	4	58	'2-2	65.38	0.7	2.4	intron	kuz +	chr2L_4_13565001	chr2L_13565001	0.50	RAL-227
55	chr2L	13598478	13598542	mdg1	420	7054	10	64	'7-3	64.10	1.6	3.8	intron	kuz +	chr2L_10_13595001	chr2L_13595001	0.70	RAL-227
56	chr2L	13717332	13717380	P-element	21	2879	6	48	'3-3	46.22	3.0	1.5	intergenic	CG31814 -	chr2L_6_13715001	chr2L_13715001	0.50	RAL-227
57	chr2L	13865152	13865234	roo	8660	408	9	82	'4-5	72.82	3.0	2.2	intron	CenG1A +	chr2L_9_13865001	chr2L_13865001	0.44	RAL-227
58	chr2L	13882257	13882317	flea	241	4764	4	60	'3-1	61.33	3.1	1.0	intron	CenG1A +	chr2L_4_13880001	chr2L_13880001	0.75	RAL-227
59	chr2L	14389032	14389054	R1A1-element	5330	5308	5	22	'3-2	62.63	5.7	0.7	intergenic	not near genes	chr2L_5_14385001	chr2L_14385001	0.60	RAL-227
60	chr2L	14716300	14716380	mdg3	5497	5251	16	80	'6-10	63.77	1.7	5.9	intergenic	not near genes	chr2L_16_14715001	chr2L_14715001	0.38	RAL-227
61	chr2L	14748821	14748899	opus	3	498	13	78	'5-8	67.13	3.6	2.8	intergenic	not near genes	chr2L_13_14745001	chr2L_14745001	0.38	RAL-227
62	chr2L	15020505	15020555	hobo	2933	14	4	50	'1-3	56.59	4.5	0.7	intron	GABA-B-R1 +	chr2L_4_15020001	chr2L_15020001	0.25	RAL-227
63	chr2L	15408878	15408933	412	7082	496	6	55	'3-3	67.56	2.7	1.6	intergenic	not near genes	chr2L_6_15405001	chr2L_15405001	0.50	RAL-227
64	chr2L	15471246	15471275	flea	4758	4789	6	29	'3-3	68.47	2.3	1.8	intergenic	not near genes	chr2L_6_15470001	chr2L_15470001	0.50	RAL-227
65	chr2L	15777932	15778001	hobo	2935	5	12	69	'5-7	60.93	3.3	2.8	intergenic	not near genes	chr2L_12_15775001	chr2L_15775001	0.42	RAL-227
66	chr2L	15884858	15884931	pogo	5	2095	6	73	'3-3	67.02	2.0	2.0	intergenic	not near genes	chr2L_6_15880001	chr2L_15880001	0.50	RAL-227
67	chr2L	15983139	15983197	jockey	4986	4565	4	58	'2-2	59.61	2.0	1.3	intergenic	not near genes	chr2L_4_15980001	chr2L_15980001	0.50	RAL-227
68	chr2L	16500626	16500681	roo	24	9069	4	55	'2-2	64.16	3.1	1.0	intron	Tpr2 +	chr2L_4_16500001	chr2L_16500001	0.50	RAL-227
69	chr2L	16641825	16641856	412	495	7518	6	31	'4-2	64.39	1.4	2.5	intron	CG42389 +	chr2L_6_16640001	chr2L_16640001	0.67	RAL-227
70	chr2L	16947499	16947582	mdg3	5249	245	15	83	'8-7	68.09	2.3	4.5	intergenic	CR44393 -	chr2L_15_16945001	chr2L_16945001	0.53	RAL-227
71	chr2L	17285442	17285515	HMS-Beagle	7035	1	10	73	'1-9	65.33	1.9	3.4	intergenic	not near genes	chr2L_10_17285001	chr2L_17285001	0.10	RAL-227
72	chr2L	17386622	17386684	FB	2	13	13	62	'9-4	65.34	3.0	3.2	intron	CLIP-190 +	chr2L_13_17385001	chr2L_17385001	0.69	RAL-227
73	chr2L	17436826	17436891	copia	4869	240	5	65	'1-4	60.27	2.4	1.5	intergenic	dl -,CG33928 -	chr2L_5_17435001	chr2L_17435001	0.20	RAL-227
74	chr2L	18199752	18199775	Ivk	5349	5372	6	23	'3-3	60.66	6.5	0.8	intron	CG42750 -	chr2L_6_18195001	chr2L_18195001	0.50	RAL-227
75	chr2L	18359954	18359973	roo	8689	8671	4	19	'2-2	64.46	4.6	0.7	intron	Fas3 +	chr2L_4_18355001	chr2L_18355001	0.50	RAL-227
76	chr2L	18570484	18570547	FB	5	9	9	63	'7-2	66.68	1.6	3.5	intron	Pde11 -	chr2L_9_18570001	chr2L_18570001	0.78	RAL-227
77	chr2L	18647446	18647472	Doc	29	3	5	26	'4-1	61.26	3.4	1.1	intron	MESR3 +	chr2L_5_18645001	chr2L_18645001	0.80	RAL-227
78	chr2L	18998914	18998943	Max-element	8238	8267	6	29	'3-3	63.86	8.9	0.6	intron	CG31792 +	chr2L_6_18995001	chr2L_18995001	0.50	RAL-227
79	chr2L	19192788	19192872	mdg3	247	5250	6	84	'3-3	65.66	4.1	1.2	intron	drl +	chr2L_6_19190001	chr2L_19190001	0.50	RAL-227
80	chr2L	19216956	19217024	mdg1	7447	1	13	68	'6-7	62.92	4.1	2.5	intergenic	CR44189 +	chr2L_13_19215001	chr2L_19215001	0.46	RAL-227
81	chr2L	19394969	19395038	mdg3	5251	5485	7	69	'5-2	62.01	2.6	1.9	intron,exon	CG17544 -,CG31798 +	chr2L_7_19390001	chr2L_19390001	0.71	RAL-227
82	chr2L	19642298	19642384	mdg3	250	5251	9	86	'6-3	65.44	0.6	5.6	intron	Lar +	chr2L_9_19640001	chr2L_19640001	0.67	RAL-227
83	chr2L	19684055	19684112	hobo	2929	2	9	57	'4-5	63.34	4.5	1.6	intron	Lar +	chr2L_9_19680001	chr2L_19680001	0.44	RAL-227
84	chr2L	19834989	19835066	hobo	2708	4	14	77	'5-9	68.98	5.1	2.3	intron	sick +	chr2L_14_19830001	chr2L_19830001	0.36	RAL-227
85	chr2L	20213597	20213621	transib2	2822	2798	8	24	'6-2	65.55	3.8	1.7	intergenic	not near genes	chr2L_8_20210001	chr2L_20210001	0.75	RAL-227
86	chr2L	20222856	20222925	P-element	1	2881	9	69	'8-1	55.01	3.4	2.0	intergenic	not near genes	chr2L_9_20220001	chr2L_20220001	0.89	RAL-227
87	chr2L	20227602	20227679	Tirant	8501	8107	13	77	'10-3	71.61	3.6	2.8	intergenic	not near genes	chr2L_13_20225001	chr2L_20225001	0.77	RAL-227
88	chr2L	20264595	20264673	copia	3	258	6	78	'3-3	56.41	2.7	1.6	intergenic	CG17570 -	chr2L_6_20260001	chr2L_20260001	0.50	RAL-227
89	chr2L	20267888	20267962	hobo	2710	4	8	74	'3-5	63.56	4.3	1.5	intergenic	not near genes	chr2L_8_20265001	chr2L_20265001	0.38	RAL-227
90	chr2L	20509260	20509308	I-element	12	5345	8	48	'4-4	58.14	3.6	1.7	intergenic	not near genes	chr2L_8_20505001	chr2L_20505001	0.50	RAL-227
91	chr2L	20682389	20682457	1360	3	8	13	68	'9-4	63.33	1.8	4.6	5` UTR	CG2617 +	chr2L_13_20680001	chr2L_20680001	0.69	RAL-227
92	chr2L	20730451	20730498	mdg3	20	5484	4	47	'2-2	64.66	4.7	0.7	3` UTR	CG9318 -	chr2L_4_20730001	chr2L_20730001	0.50	RAL-227
93	chr2L	20841947	20841971	G6	1994	2018	7	24	'4-3	56.95	9.3	0.7	intron	CG31676 +	chr2L_7_20840001	chr2L_20840001	0.57	RAL-227
94	chr2L	20854457	20854530	mdg3	5255	241	6	73	'3-3	58.60	3.9	1.2	intron	twit +	chr2L_6_20850001	chr2L_20850001	0.50	RAL-227
95	chr2L	20890783	20890864	mdg3	5251	249	11	81	'7-4	65.95	4.5	2.0	intron,intron	CG43739 -,sky -	chr2L_11_20890001	chr2L_20890001	0.64	RAL-227
96	chr2L	21243473	21243504	blood	7043	1	6	31	'3-3	65.86	2.8	1.6	intron	Hr39 +	chr2L_6_21240001	chr2L_21240001	0.50	RAL-227
97	chr2L	21360400	21360482	HMS-Beagle2	7199	4	6	82	'3-3	63.45	2.6	1.7	intergenic	not near genes	chr2L_6_21360001	chr2L_21360001	0.50	RAL-227
98	chr2L	21734238	21734273	Juan	12	4199	4	35	'3-1	65.84	0.5	2.7	intergenic	not near genes	chr2L_4_21730001	chr2L_21730001	0.75	RAL-227
99	chr2L	22497771	22497813	P-element	2886	33	5	42	'4-1	55.20	1.4	2.1	intergenic	not near genes	chr2L_5_22495001	chr2L_22495001	0.80	RAL-227
100	chr2L	22497805	22497820	Tabor	484	7308	4	15	'2-2	59.00	2.4	1.2	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.50	RAL-227
101	chr2L	22731352	22731421	Max-element	8235	8523	13	69	'6-7	58.05	2.8	3.4	intron	CG40006 -	chr2L_13_22730001	chr2L_22730001	0.46	RAL-227
102	chr2L	22968538	22968605	Tirant	4	400	14	67	'5-9	65.50	2.8	3.7	intergenic	not near genes	chr2L_14_22965001	chr2L_22965001	0.36	RAL-227
103	chr2L	23068859	23068923	1360	3381	3382	9	64	'4-5	67.60	3.1	2.2	intergenic	CR43242 +,Spf45 -	chr2L_9_23065001	chr2L_23065001	0.44	RAL-227
104	chr2L	23162110	23162177	mdg3	5490	5256	4	67	'1-3	62.90	4.2	0.8	exon	CG12567 -	chr2L_4_23160001	chr2L_23160001	0.25	RAL-227
105	chr2L	23295815	23295846	micropia	5414	4971	5	31	'2-3	66.94	2.5	1.4	intergenic	not near genes	chr2L_5_23295001	chr2L_23295001	0.40	RAL-227
106	chr2L	23299985	23300001	invader4	326	340	4	16	'1-3	63.37	3.5	0.9	intergenic	not near genes	chr2L_4_23295001	chr2L_23295001	0.25	RAL-227
107	chr2R	544813	544862	HMS-Beagle	18	233	7	49	'5-2	67.05	2.7	1.9	intron	CG40378 +	chr2R_7_540001	chr2R_540001	0.71	RAL-227
108	chr2R	3117370	3117396	Tirant	4	10	6	26	'3-3	63.15	5.2	1.0	intron	CG42596 +	chr2R_6_3115001	chr2R_3115001	0.50	RAL-227
109	chr2R	3146454	3146472	rover	7076	91	6	18	'4-2	52.39	5.9	0.9	intron	CG42596 +	chr2R_6_3145001	chr2R_3145001	0.67	RAL-227
110	chr2R	3919666	3919681	1360	3381	23	6	15	'4-2	56.89	6.3	0.8	intron	uex -	chr2R_6_3915001	chr2R_3915001	0.67	RAL-227
111	chr2R	4731225	4731250	F-element	37	13	4	25	'3-1	61.75	2.5	1.1	5` UTR	CR45471 +	chr2R_4_4730001	chr2R_4730001	0.75	RAL-227
112	chr2R	5010109	5010137	Porto1	4441	4419	5	28	'3-2	63.43	6.5	0.7	intron	Ir41a +	chr2R_5_5010001	chr2R_5010001	0.60	RAL-227
113	chr2R	5524117	5524195	flea	248	4753	10	78	'2-8	66.93	2.8	2.6	intron	CG30438 +	chr2R_10_5520001	chr2R_5520001	0.20	RAL-227
114	chr2R	5851835	5851896	hobo	12	2934	7	61	'1-6	61.10	2.7	1.9	intron	dpr12 +	chr2R_7_5850001	chr2R_5850001	0.14	RAL-227
115	chr2R	6173008	6173077	pogo	14	2100	8	69	'2-6	71.29	2.3	2.4	intergenic	not near genes	chr2R_8_6170001	chr2R_6170001	0.25	RAL-227
116	chr2R	6174315	6174368	Max-element	288	8250	7	53	'2-5	56.31	3.4	1.6	exon	Cyp6w1 +	chr2R_7_6170001	chr2R_6170001	0.29	RAL-227
117	chr2R	6438350	6438371	Stalker4	401	7338	8	21	'5-3	62.53	14.0	0.5	intergenic	not near genes	chr2R_8_6435001	chr2R_6435001	0.62	RAL-227
118	chr2R	6488001	6488082	pogo	1	2099	16	81	'6-10	65.89	2.7	4.3	intergenic	not near genes	chr2R_16_6485001	chr2R_6485001	0.38	RAL-227
119	chr2R	6879481	6879557	roo	406	2	11	76	'8-3	63.10	3.8	2.3	intron,3` UTR	CR44169 +,Spn42Db -	chr2R_11_6875001	chr2R_6875001	0.73	RAL-227
120	chr2R	7022463	7022549	invader4	2762	328	9	86	'4-5	66.88	2.9	2.3	intergenic	not near genes	chr2R_9_7020001	chr2R_7020001	0.44	RAL-227
121	chr2R	7066736	7066770	jockey	4671	4704	6	34	'3-3	65.52	5.3	1.0	intergenic	not near genes	chr2R_6_7065001	chr2R_7065001	0.50	RAL-227
122	chr2R	7103907	7103953	Max-element	8515	8249	5	46	'3-2	58.08	3.5	1.1	intron	esn +	chr2R_5_7100001	chr2R_7100001	0.60	RAL-227
123	chr2R	7255803	7255883	297	3	395	4	80	'3-1	65.34	3.3	0.9	5` UTR	CR45280 +	chr2R_4_7255001	chr2R_7255001	0.75	RAL-227
124	chr2R	7394106	7394121	mariner2	28	43	5	15	'2-3	58.33	3.2	1.2	intron	CG1707 -	chr2R_5_7390001	chr2R_7390001	0.40	RAL-227
125	chr2R	7955090	7955150	FB	5	12	14	60	'8-6	64.11	0.5	9.3	intron	CG14764 -	chr2R_14_7955001	chr2R_7955001	0.57	RAL-227
126	chr2R	8086880	8086946	1360	3378	2	10	66	'3-7	68.07	3.9	2.0	3` UTR	sut1 +	chr2R_10_8085001	chr2R_8085001	0.30	RAL-227
127	chr2R	8158872	8158952	pogo	3	2100	7	80	'5-2	67.57	2.9	1.8	intergenic	not near genes	chr2R_7_8155001	chr2R_8155001	0.71	RAL-227
128	chr2R	9633082	9633153	Transpac	308	6	20	71	'10-10	61.39	4.9	3.4	intron	Mmp2 -	chr2R_20_9630001	chr2R_9630001	0.50	RAL-227
129	chr2R	9639096	9639121	BS	5028	5003	6	25	'5-1	64.81	3.4	1.4	intron	Mmp2 -	chr2R_6_9635001	chr2R_9635001	0.83	RAL-227
130	chr2R	9870710	9870787	S-element	1713	1714	7	77	'5-2	66.36	1.3	3.0	intron	cbx -	chr2R_7_9870001	chr2R_9870001	0.71	RAL-227
131	chr2R	9999066	9999118	17.6	5	490	7	52	'1-6	64.38	2.2	2.2	intron	Pka-R2 -	chr2R_7_9995001	chr2R_9995001	0.14	RAL-227
132	chr2R	10117124	10117206	gypsy	7448	6985	15	82	'4-11	65.02	3.0	3.8	3` UTR	Pfk +	chr2R_15_10115001	chr2R_10115001	0.27	RAL-227
133	chr2R	10165024	10165098	roo	7	410	13	74	'6-7	64.70	3.2	3.1	intron	KCNQ -	chr2R_13_10165001	chr2R_10165001	0.46	RAL-227
134	chr2R	10224236	10224289	I-element	7	5342	9	53	'4-5	55.96	1.4	3.8	intron,intron	CG12912 -,Hr46 -	chr2R_9_10220001	chr2R_10220001	0.44	RAL-227
135	chr2R	10226515	10226566	1360	151	1	15	51	'2-13	60.67	3.2	3.6	intron,intron	CG12912 -,Hr46 -	chr2R_15_10225001	chr2R_10225001	0.13	RAL-227
136	chr2R	10411366	10411438	297	6586	393	6	72	'4-2	66.49	2.5	1.7	intron	CG42732 -	chr2R_6_10410001	chr2R_10410001	0.67	RAL-227
137	chr2R	10574611	10574650	I-element	5342	13	4	39	'1-3	58.67	1.7	1.5	intron	psq +	chr2R_4_10570001	chr2R_10570001	0.25	RAL-227
138	chr2R	10777326	10777403	pogo	2100	6	8	77	'3-5	65.26	2.2	2.5	intron	CG33144 -	chr2R_8_10775001	chr2R_10775001	0.38	RAL-227
139	chr2R	11178605	11178679	Max-element	5	8535	11	74	'6-5	60.96	3.7	2.3	intron	shn +	chr2R_11_11175001	chr2R_11175001	0.55	RAL-227
140	chr2R	11199585	11199661	roo	404	8664	14	76	'6-8	67.08	4.1	2.7	intron	shn +	chr2R_14_11195001	chr2R_11195001	0.43	RAL-227
141	chr2R	11671172	11671245	roo	410	8673	10	73	'5-5	67.35	3.3	2.3	intron,exon	Roc2 -,Tret1-1 +	chr2R_10_11670001	chr2R_11670001	0.50	RAL-227
142	chr2R	11700242	11700322	opus	2	498	8	80	'4-4	68.10	3.1	2.0	intergenic	Ir48b -	chr2R_8_11700001	chr2R_11700001	0.50	RAL-227
143	chr2R	11702329	11702411	blood	377	7009	17	82	'10-7	67.67	3.3	4.0	exon	Ir48b -	chr2R_17_11700001	chr2R_11700001	0.59	RAL-227
144	chr2R	12108161	12108238	mdg3	248	5253	13	77	'5-8	65.88	2.5	3.7	intron	jeb -	chr2R_13_12105001	chr2R_12105001	0.38	RAL-227
145	chr2R	12185336	12185407	accord	7377	1	9	71	'2-7	65.64	5.6	1.4	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_9_12185001	chr2R_12185001	0.22	RAL-227
146	chr2R	12210829	12210856	flea	230	257	10	27	'4-6	61.78	3.6	2.2	intron	Sr-CII -	chr2R_10_12210001	chr2R_12210001	0.40	RAL-227
147	chr2R	12247111	12247127	jockey	4965	4981	5	16	'3-2	54.66	5.0	0.8	intergenic	CR44315 -	chr2R_5_12245001	chr2R_12245001	0.60	RAL-227
148	chr2R	12282004	12282070	roo	3	398	17	66	'9-8	68.49	3.2	4.0	intron	CG42700 +	chr2R_17_12280001	chr2R_12280001	0.53	RAL-227
149	chr2R	12342025	12342088	pogo	15	2095	5	63	'1-4	65.49	1.7	1.9	intron	CG8839 -	chr2R_5_12340001	chr2R_12340001	0.20	RAL-227
150	chr2R	12479058	12479124	FB	7	2	7	66	'3-4	68.76	1.3	3.0	intron	Dh44-R2 +	chr2R_7_12475001	chr2R_12475001	0.43	RAL-227
151	chr2R	12564657	12564738	pogo	1	2099	16	81	'7-9	64.67	2.9	4.1	intron	CG33775 -	chr2R_16_12560001	chr2R_12560001	0.44	RAL-227
152	chr2R	12581039	12581109	pogo	15	2100	6	70	'2-4	70.67	1.8	2.1	intron	Sin3A -	chr2R_6_12580001	chr2R_12580001	0.33	RAL-227
153	chr2R	12600839	12600905	roo	8666	396	12	66	'8-4	65.85	0.3	9.2	intron	Amph +	chr2R_12_12600001	chr2R_12600001	0.67	RAL-227
154	chr2R	12896010	12896083	mdg3	5251	5489	8	73	'4-4	67.94	2.0	2.7	intron	vg +	chr2R_8_12895001	chr2R_12895001	0.50	RAL-227
155	chr2R	12980872	12980936	P-element	2880	6	8	64	'2-6	55.99	4.1	1.6	5` UTR	Psc -	chr2R_8_12980001	chr2R_12980001	0.25	RAL-227
156	chr2R	13020331	13020356	Doc	29	4	4	25	'3-1	54.33	3.1	1.0	intergenic	not near genes	chr2R_4_13020001	chr2R_13020001	0.75	RAL-227
157	chr2R	13167926	13167997	P-element	2883	2884	11	71	'5-6	49.95	4.5	2.0	5` UTR	GLaz -	chr2R_11_13165001	chr2R_13165001	0.45	RAL-227
158	chr2R	13374701	13374764	1360	9	6	15	63	'6-9	67.87	3.7	3.2	intergenic	not near genes	chr2R_15_13370001	chr2R_13370001	0.40	RAL-227
159	chr2R	13664116	13664189	hopper	6	1414	18	73	'9-9	60.85	3.0	4.5	intron	fas +	chr2R_18_13660001	chr2R_13660001	0.50	RAL-227
160	chr2R	13714855	13714916	Transpac	14	5222	13	61	'3-10	63.06	1.8	4.6	exon	fas +	chr2R_13_13710001	chr2R_13710001	0.23	RAL-227
161	chr2R	13758971	13759052	297	395	6581	8	81	'6-2	73.28	2.7	2.2	3` UTR	CG6280 +	chr2R_8_13755001	chr2R_13755001	0.75	RAL-227
162	chr2R	13910468	13910532	pogo	15	2097	11	64	'3-8	70.83	2.4	3.2	intron	shot -	chr2R_11_13910001	chr2R_13910001	0.27	RAL-227
163	chr2R	14226896	14226975	pogo	2098	3	9	79	'4-5	65.27	2.1	2.9	intron	CG8468 +	chr2R_9_14225001	chr2R_14225001	0.44	RAL-227
164	chr2R	14230487	14230566	copia	4872	257	7	79	'2-5	72.95	2.5	2.0	3` UTR	CG8468 +	chr2R_7_14230001	chr2R_14230001	0.29	RAL-227
165	chr2R	14565530	14565633	mdg3	5251	243	9	103	'5-4	59.47	2.3	2.7	intron	ttv +	chr2R_9_14565001	chr2R_14565001	0.56	RAL-227
166	chr2R	14628865	14628936	297	394	6580	4	71	'2-2	63.00	2.1	1.3	intergenic	not near genes	chr2R_4_14625001	chr2R_14625001	0.50	RAL-227
167	chr2R	14635060	14635143	mdg3	247	5250	10	83	'3-7	62.11	4.0	2.0	intergenic	not near genes	chr2R_10_14635001	chr2R_14635001	0.30	RAL-227
168	chr2R	14848981	14849008	flea	4723	4697	10	27	'6-4	68.56	9.0	1.0	exon	SMC2 -	chr2R_10_14845001	chr2R_14845001	0.60	RAL-227
169	chr2R	15059065	15059143	Stalker2	7247	406	5	78	'2-3	67.43	1.9	1.7	intergenic	not near genes	chr2R_5_15055001	chr2R_15055001	0.40	RAL-227
170	chr2R	15162989	15163060	mdg3	251	5266	11	71	'6-5	63.93	4.1	2.2	intron	igl +	chr2R_11_15160001	chr2R_15160001	0.55	RAL-227
171	chr2R	15181218	15181296	mdg3	5494	5251	7	78	'4-3	62.61	4.6	1.2	intron	igl +	chr2R_7_15180001	chr2R_15180001	0.57	RAL-227
172	chr2R	15214118	15214184	1360	9	3385	14	66	'3-11	65.95	4.2	2.7	3` UTR	CG8093 -	chr2R_14_15210001	chr2R_15210001	0.21	RAL-227
173	chr2R	15392594	15392645	flea	4782	5013	6	51	'4-2	71.44	3.0	1.5	intergenic	not near genes	chr2R_6_15390001	chr2R_15390001	0.67	RAL-227
174	chr2R	15568174	15568241	copia	255	4881	5	67	'2-3	63.44	6.8	0.6	exon	Flo1 -	chr2R_5_15565001	chr2R_15565001	0.40	RAL-227
175	chr2R	15625502	15625583	blood	375	7009	15	81	'6-9	66.54	3.2	3.6	intron	CG42524 +	chr2R_15_15625001	chr2R_15625001	0.40	RAL-227
176	chr2R	16035789	16035806	hobo	4	21	7	17	'4-3	62.61	6.8	0.9	intron	SP2353 +	chr2R_7_16035001	chr2R_16035001	0.57	RAL-227
177	chr2R	16056360	16056412	mdg3	227	5262	4	52	'2-2	64.00	6.0	0.6	intron	CG8405 +	chr2R_4_16055001	chr2R_16055001	0.50	RAL-227
178	chr2R	17283045	17283103	hobo	2921	2	14	58	'5-9	62.10	5.9	2.0	intron	mbl +	chr2R_14_17280001	chr2R_17280001	0.36	RAL-227
179	chr2R	17459003	17459099	Max-element	288	8239	4	96	'2-2	47.13	2.1	1.3	intron	CG14478 +	chr2R_4_17455001	chr2R_17455001	0.50	RAL-227
180	chr2R	17773613	17773674	blood	7010	353	11	61	'5-6	70.33	2.9	2.8	intergenic	CG33981 -,fab1 -	chr2R_11_17770001	chr2R_17770001	0.45	RAL-227
181	chr2R	18382466	18382510	roo	29	9065	4	44	'2-2	64.86	1.8	1.4	intergenic	IM23 -	chr2R_4_18380001	chr2R_18380001	0.50	RAL-227
182	chr2R	18618331	18618415	mdg3	5247	245	4	84	'3-1	67.76	2.8	1.1	intron	CG5493 -	chr2R_4_18615001	chr2R_18615001	0.75	RAL-227
183	chr2R	18857992	18858050	P-element	2884	17	10	58	'5-5	46.30	5.4	1.6	5` UTR	Jheh2 -	chr2R_10_18855001	chr2R_18855001	0.50	RAL-227
184	chr2R	18875764	18875810	I-element	5339	9	4	46	'2-2	63.21	2.2	1.2	intergenic	not near genes	chr2R_4_18875001	chr2R_18875001	0.50	RAL-227
185	chr2R	19200028	19200056	hopper	1	1383	7	28	'3-4	67.72	4.1	1.4	intron	hppy +	chr2R_7_19200001	chr2R_19200001	0.43	RAL-227
186	chr2R	19688902	19688959	Tirant	3	375	11	57	'7-4	66.91	2.6	3.1	intergenic	not near genes	chr2R_11_19685001	chr2R_19685001	0.64	RAL-227
187	chr2R	20172414	20172445	mdg3	5475	5279	4	31	'2-2	64.97	1.9	1.4	intergenic	not near genes	chr2R_4_20170001	chr2R_20170001	0.50	RAL-227
188	chr2R	20405402	20405480	blood	379	4	15	78	'5-10	63.26	1.9	5.2	intergenic	not near genes	chr2R_15_20405001	chr2R_20405001	0.33	RAL-227
189	chr2R	20714947	20715001	mdg3	5482	5262	5	54	'1-4	61.81	4.7	0.9	intron	dpr +	chr2R_5_20710001	chr2R_20710001	0.20	RAL-227
190	chr2R	20737648	20737717	diver	218	5	7	69	'3-4	63.07	1.3	3.0	intron	dpr +	chr2R_7_20735001	chr2R_20735001	0.43	RAL-227
191	chr2R	20836052	20836119	P-element	2	2886	12	67	'8-4	50.41	1.2	5.5	intergenic	insc -,sktl -	chr2R_12_20835001	chr2R_20835001	0.67	RAL-227
192	chr2R	21101790	21101839	P-element	2863	4	4	49	'1-3	52.75	5.8	0.6	intergenic	ktub +,CG34396 +	chr2R_4_21100001	chr2R_21100001	0.25	RAL-227
193	chr2R	21145885	21145954	297	388	6	6	69	'3-3	68.05	2.4	1.8	intergenic	Xbp1 +,Hmg-2 +	chr2R_6_21145001	chr2R_21145001	0.50	RAL-227
194	chr2R	21426695	21426752	mdg3	240	5265	4	57	'2-2	60.77	3.6	0.9	intron	Sdc -	chr2R_4_21425001	chr2R_21425001	0.50	RAL-227
195	chr2R	21498840	21498901	roo	14	403	7	61	'4-3	67.43	5.5	1.1	intergenic	TAF1C-like -	chr2R_7_21495001	chr2R_21495001	0.57	RAL-227
196	chr2R	22197248	22197322	P-element	2884	1	13	74	'6-7	55.72	5.3	2.1	intron	Swim -	chr2R_13_22195001	chr2R_22195001	0.46	RAL-227
197	chr2R	22575019	22575086	Tirant	403	21	14	67	'7-7	64.51	3.7	3.0	intron	dnr1 -	chr2R_14_22575001	chr2R_22575001	0.50	RAL-227
198	chr2R	22616876	22616932	BS	5004	5083	10	56	'6-4	59.63	4.0	2.0	intron	CG33143 +	chr2R_10_22615001	chr2R_22615001	0.60	RAL-227
199	chr2R	22822497	22822526	blood	7010	28	14	29	'6-8	63.98	8.1	1.5	intron	CG42284 +	chr2R_14_22820001	chr2R_22820001	0.43	RAL-227
200	chr2R	22842576	22842640	roo	8923	409	6	64	'3-3	57.25	4.0	1.2	3` UTR	CG9826 +	chr2R_6_22840001	chr2R_22840001	0.50	RAL-227
201	chr2R	22901280	22901358	mdg3	5497	5254	12	78	'3-9	60.56	4.6	2.1	intron	nahoda +	chr2R_12_22900001	chr2R_22900001	0.25	RAL-227
202	chr2R	22914377	22914448	Stalker2	401	7253	11	71	'6-5	62.42	5.7	1.6	intron	nahoda +	chr2R_11_22910001	chr2R_22910001	0.55	RAL-227
203	chr2R	23213262	23213301	I-element	5334	6	7	39	'2-5	66.03	0.7	4.1	intergenic	not near genes	chr2R_7_23210001	chr2R_23210001	0.29	RAL-227
204	chr2R	23375336	23375403	Max-element	12	300	5	67	'2-3	57.22	3.7	1.1	exon	Golgin245 -	chr2R_5_23375001	chr2R_23375001	0.40	RAL-227
205	chr2R	23447620	23447702	flea	4758	257	9	82	'5-4	66.56	5.3	1.4	intron	CG43795 +	chr2R_9_23445001	chr2R_23445001	0.56	RAL-227
206	chr2R	23469949	23470009	flea	4777	254	5	60	'2-3	63.22	6.0	0.7	intron	CG43795 +	chr2R_5_23465001	chr2R_23465001	0.40	RAL-227
207	chr2R	23486282	23486315	opus	21	7480	7	33	'6-1	71.14	2.1	2.3	intron	CG43795 +	chr2R_7_23485001	chr2R_23485001	0.86	RAL-227
208	chr2R	23519389	23519459	3S18	332	5765	11	70	'3-8	67.14	2.4	3.2	intergenic	RabX1 -	chr2R_11_23515001	chr2R_23515001	0.27	RAL-227
209	chr2R	24237239	24237290	Max-element	274	8236	6	51	'3-3	62.27	3.9	1.2	intergenic	CR44827 -	chr2R_6_24235001	chr2R_24235001	0.50	RAL-227
210	chr2R	24242757	24242822	diver	15	224	15	65	'5-10	61.46	3.2	3.6	intergenic	nord +	chr2R_15_24240001	chr2R_24240001	0.33	RAL-227
211	chr2R	24320201	24320254	roo	9054	10	10	53	'4-6	65.66	0.4	7.1	intergenic	not near genes	chr2R_10_24320001	chr2R_24320001	0.40	RAL-227
212	chr2R	24722360	24722387	mdg3	5284	5257	4	27	'2-2	66.54	5.7	0.6	intron	Mid1 -	chr2R_4_24720001	chr2R_24720001	0.50	RAL-227
213	chr3L	41520	41598	blood	376	1	12	78	'6-6	66.49	1.6	4.6	intergenic	not near genes	chr3L_12_40001	chr3L_40001	0.50	RAL-227
214	chr3L	46942	46978	FB	16	18	6	36	'2-4	66.27	4.6	1.1	intergenic	not near genes	chr3L_6_45001	chr3L_45001	0.33	RAL-227
215	chr3L	68903	68985	mdg3	5252	247	11	82	'8-3	67.73	3.6	2.4	3` UTR	Lsp1gamma +	chr3L_11_65001	chr3L_65001	0.73	RAL-227
216	chr3L	131478	131546	P-element	2885	2	8	68	'4-4	53.76	1.5	3.2	intron	Pdk1 +	chr3L_8_130001	chr3L_130001	0.50	RAL-227
217	chr3L	544771	544822	FB	22	1	9	51	'4-5	64.57	2.2	2.8	intergenic	not near genes	chr3L_9_540001	chr3L_540001	0.44	RAL-227
218	chr3L	1475266	1475338	P-element	2886	2882	11	72	'4-7	54.71	3.2	2.6	intergenic	Ptp61F -,stet -	chr3L_11_1475001	chr3L_1475001	0.36	RAL-227
219	chr3L	2198136	2198151	roo	405	390	4	15	'3-1	61.67	2.8	1.1	intergenic	CG8960 +	chr3L_4_2195001	chr3L_2195001	0.75	RAL-227
220	chr3L	2687435	2687516	Transpac	4918	309	13	81	'2-11	64.37	1.2	5.9	intron	Fife -	chr3L_13_2685001	chr3L_2685001	0.15	RAL-227
221	chr3L	3076767	3076823	jockey	4986	4684	13	56	'4-9	62.69	3.0	3.2	intron	CG11486 +	chr3L_13_3075001	chr3L_3075001	0.31	RAL-227
222	chr3L	3123443	3123496	FB	7	17	6	53	'1-5	67.51	2.4	1.8	intron	prominin-like -	chr3L_6_3120001	chr3L_3120001	0.17	RAL-227
223	chr3L	3485181	3485259	pogo	3	2098	6	78	'3-3	67.70	2.2	1.9	intron	CG42324 +	chr3L_6_3485001	chr3L_3485001	0.50	RAL-227
224	chr3L	3725410	3725482	HMS-Beagle	6800	240	11	72	'7-4	64.75	3.3	2.6	intron	CG32264 -	chr3L_11_3725001	chr3L_3725001	0.64	RAL-227
225	chr3L	3819935	3819985	P-element	19	2878	7	50	'3-4	48.33	4.5	1.3	intron	enc +	chr3L_7_3815001	chr3L_3815001	0.43	RAL-227
226	chr3L	4144408	4144488	pogo	2100	3	9	80	'6-3	69.66	2.8	2.4	intron	CG32260 +	chr3L_9_4140001	chr3L_4140001	0.67	RAL-227
227	chr3L	4462301	4462338	roo	9049	8685	6	37	'2-4	75.51	0.2	5.0	intergenic	not near genes	chr3L_6_4460001	chr3L_4460001	0.33	RAL-227
228	chr3L	4727451	4727505	roo	9055	8670	10	54	'4-6	68.75	2.9	2.6	intron	RhoGEF64C +	chr3L_10_4725001	chr3L_4725001	0.40	RAL-227
229	chr3L	5491645	5491708	1731	4313	300	4	63	'2-2	65.19	3.7	0.9	intergenic	not near genes	chr3L_4_5490001	chr3L_5490001	0.50	RAL-227
230	chr3L	5769101	5769170	P-element	2884	2881	16	69	'7-9	49.24	4.7	2.8	5` UTR	scny +	chr3L_16_5765001	chr3L_5765001	0.44	RAL-227
231	chr3L	5888232	5888292	mdg3	5261	5486	6	60	'5-1	54.45	3.8	1.2	intergenic	not near genes	chr3L_6_5885001	chr3L_5885001	0.83	RAL-227
232	chr3L	5957060	5957138	blood	377	7014	9	78	'6-3	68.90	2.2	2.8	intergenic	not near genes	chr3L_9_5955001	chr3L_5955001	0.67	RAL-227
233	chr3L	6338050	6338078	1360	2	30	5	28	'2-3	70.06	5.6	0.8	intron	CG13300 -	chr3L_5_6335001	chr3L_6335001	0.40	RAL-227
234	chr3L	6506661	6506736	mdg3	5259	247	9	75	'5-4	67.69	2.6	2.5	intron	sfl +	chr3L_9_6505001	chr3L_6505001	0.56	RAL-227
235	chr3L	6519204	6519274	mdg3	5489	5253	7	70	'4-3	62.31	2.7	1.9	intron	sfl +	chr3L_7_6515001	chr3L_6515001	0.57	RAL-227
236	chr3L	7073212	7073233	roo	9051	408	4	21	'3-1	65.83	2.4	1.2	intron	CG8641 -	chr3L_4_7070001	chr3L_7070001	0.75	RAL-227
237	chr3L	7082285	7082352	FB	8	1	6	67	'4-2	61.78	2.3	1.8	intergenic	not near genes	chr3L_6_7080001	chr3L_7080001	0.67	RAL-227
238	chr3L	7108933	7109004	mdg3	5490	5248	9	71	'6-3	61.14	3.4	2.0	intron	form3 +	chr3L_9_7105001	chr3L_7105001	0.67	RAL-227
239	chr3L	7297673	7297740	412	492	13	7	67	'4-3	60.74	1.2	3.2	intron	unc-13-4A -	chr3L_7_7295001	chr3L_7295001	0.57	RAL-227
240	chr3L	7823804	7823889	Stalker2	8	7649	5	85	'3-2	52.77	2.4	1.5	intron	Pdp1 -	chr3L_5_7820001	chr3L_7820001	0.60	RAL-227
241	chr3L	8039572	8039611	hobo	22	2922	6	39	'3-3	69.69	4.6	1.1	intron	nmo +	chr3L_6_8035001	chr3L_8035001	0.50	RAL-227
242	chr3L	8264636	8264688	hobo	2915	2	4	52	'1-3	67.00	3.8	0.8	intron	Dscam4 +	chr3L_4_8260001	chr3L_8260001	0.25	RAL-227
243	chr3L	8700887	8700964	mdg3	241	5251	9	77	'3-6	60.79	2.1	2.9	intergenic	not near genes	chr3L_9_8700001	chr3L_8700001	0.33	RAL-227
244	chr3L	9095254	9095330	mdg1	7458	4	9	76	'6-3	64.12	2.4	2.6	intergenic	CG32032 +	chr3L_9_9095001	chr3L_9095001	0.67	RAL-227
245	chr3L	9315396	9315445	hobo	6	2918	6	49	'4-2	65.24	2.5	1.7	intergenic	not near genes	chr3L_6_9315001	chr3L_9315001	0.67	RAL-227
246	chr3L	9338276	9338352	S-element	3	1712	10	76	'4-6	63.28	3.3	2.3	3` UTR	PGRP-LA +	chr3L_10_9335001	chr3L_9335001	0.40	RAL-227
247	chr3L	9421430	9421504	S-element	1714	4	7	74	'4-3	60.59	4.6	1.2	intron	CG3967 -	chr3L_7_9420001	chr3L_9420001	0.57	RAL-227
248	chr3L	9442912	9442935	TAHRE	10076	10097	8	23	'6-2	65.00	4.9	1.4	intergenic	CG33926 +	chr3L_8_9440001	chr3L_9440001	0.75	RAL-227
249	chr3L	9858316	9858331	pogo	2081	2096	4	15	'3-1	62.33	3.9	0.8	intron	CG10809 -	chr3L_4_9855001	chr3L_9855001	0.75	RAL-227
250	chr3L	10022290	10022365	roo	8670	409	13	75	'3-10	64.13	2.8	3.4	intron	dpr6 +	chr3L_13_10020001	chr3L_10020001	0.23	RAL-227
251	chr3L	10106532	10106569	roo	9038	412	6	37	'3-3	71.78	2.0	2.0	intron	dpr6 +	chr3L_6_10105001	chr3L_10105001	0.50	RAL-227
252	chr3L	10362942	10363018	Tirant	402	8118	14	76	'9-5	65.72	2.1	4.5	5` UTR	CR44327 +	chr3L_14_10360001	chr3L_10360001	0.64	RAL-227
253	chr3L	10469947	10470017	pogo	2093	6	9	70	'5-4	65.27	3.1	2.2	intergenic	not near genes	chr3L_9_10465001	chr3L_10465001	0.56	RAL-227
254	chr3L	10477057	10477115	copia	21	254	7	58	'2-5	66.23	3.0	1.8	intergenic	not near genes	chr3L_7_10475001	chr3L_10475001	0.29	RAL-227
255	chr3L	10566237	10566261	hopper	1412	28	5	24	'2-3	64.51	3.5	1.1	intron	A2bp1 +	chr3L_5_10565001	chr3L_10565001	0.40	RAL-227
256	chr3L	10655648	10655707	Ivk	2	5367	6	59	'4-2	62.42	1.3	2.6	intron	CG32066 -	chr3L_6_10655001	chr3L_10655001	0.67	RAL-227
257	chr3L	11756515	11756567	I-element	5	5344	6	52	'5-1	60.49	4.0	1.2	intron	CG6024 -	chr3L_6_11755001	chr3L_11755001	0.83	RAL-227
258	chr3L	11949196	11949279	mdg3	5251	247	11	83	'9-2	66.94	3.5	2.4	exon	CG7252 +	chr3L_11_11945001	chr3L_11945001	0.82	RAL-227
259	chr3L	12729122	12729178	mdg3	5261	5482	6	56	'4-2	60.72	2.7	1.6	intergenic	not near genes	chr3L_6_12725001	chr3L_12725001	0.67	RAL-227
260	chr3L	12863686	12863767	Transpac	4918	308	14	81	'7-7	67.23	5.2	2.3	intergenic	not near genes	chr3L_14_12860001	chr3L_12860001	0.50	RAL-227
261	chr3L	12914144	12914206	springer	7154	382	5	62	'2-3	62.12	2.1	1.6	intergenic	CG32115 -	chr3L_5_12910001	chr3L_12910001	0.40	RAL-227
262	chr3L	12990382	12990450	mdg3	247	5249	9	68	'3-6	65.67	3.0	2.2	intergenic	not near genes	chr3L_9_12990001	chr3L_12990001	0.33	RAL-227
263	chr3L	13001266	13001320	mdg3	5470	5251	14	54	'4-10	66.68	2.5	4.0	intergenic	not near genes	chr3L_14_13000001	chr3L_13000001	0.29	RAL-227
264	chr3L	13056487	13056560	Transpac	5228	8	6	73	'3-3	66.67	0.9	3.2	intergenic	not near genes	chr3L_6_13055001	chr3L_13055001	0.50	RAL-227
265	chr3L	13320887	13320966	Transpac	309	1	10	79	'4-6	68.63	2.8	2.6	intergenic	not near genes	chr3L_10_13320001	chr3L_13320001	0.40	RAL-227
266	chr3L	13342255	13342295	Transpac	289	4930	4	40	'1-3	57.44	5.7	0.6	intergenic	not near genes	chr3L_4_13340001	chr3L_13340001	0.25	RAL-227
267	chr3L	13365897	13365954	jockey	4984	4699	9	57	'2-7	64.31	3.6	2.0	intergenic	not near genes	chr3L_9_13365001	chr3L_13365001	0.22	RAL-227
268	chr3L	13570676	13570727	copia	228	2	5	51	'1-4	66.73	5.1	0.8	intron	bru-3 -	chr3L_5_13570001	chr3L_13570001	0.20	RAL-227
269	chr3L	13614328	13614412	opus	499	7113	17	84	'11-6	64.16	3.5	3.8	intron	bru-3 -	chr3L_17_13610001	chr3L_13610001	0.65	RAL-227
270	chr3L	13628208	13628231	jockey	31	8	11	23	'7-4	59.53	4.6	2.0	intron	bru-3 -	chr3L_11_13625001	chr3L_13625001	0.64	RAL-227
271	chr3L	13740678	13740752	blood	7382	7011	13	74	'5-8	64.79	4.0	2.6	intron	bru-3 -	chr3L_13_13740001	chr3L_13740001	0.38	RAL-227
272	chr3L	13985030	13985098	roo	8676	408	9	68	'4-5	62.22	2.1	2.9	intron	CG17364 -	chr3L_9_13985001	chr3L_13985001	0.44	RAL-227
273	chr3L	13993365	13993437	P-element	2886	2	8	72	'3-5	49.57	4.1	1.6	5` UTR	CG17364 -	chr3L_8_13990001	chr3L_13990001	0.38	RAL-227
274	chr3L	14271964	14272009	3S18	5765	6071	6	45	'4-2	66.84	2.2	1.9	intergenic	not near genes	chr3L_6_14270001	chr3L_14270001	0.67	RAL-227
275	chr3L	14323618	14323683	1360	12	3387	17	65	'9-8	67.42	2.9	4.4	intron,intron	fz +,CR45025 -	chr3L_17_14320001	chr3L_14320001	0.53	RAL-227
276	chr3L	14448669	14448717	P-element	2879	2871	6	48	'4-2	42.66	4.6	1.1	intron	bbg -	chr3L_6_14445001	chr3L_14445001	0.67	RAL-227
277	chr3L	14822850	14822906	mdg1	7447	10	6	56	'4-2	61.40	2.8	1.6	intron	CG17839 +	chr3L_6_14820001	chr3L_14820001	0.67	RAL-227
278	chr3L	15010153	15010219	mdg3	5253	5488	9	66	'3-6	65.03	6.4	1.2	intron	Reck -	chr3L_9_15010001	chr3L_15010001	0.33	RAL-227
279	chr3L	15103822	15103900	Burdock	6137	252	6	78	'5-1	64.00	2.4	1.8	intron	CTPsyn +	chr3L_6_15100001	chr3L_15100001	0.83	RAL-227
280	chr3L	15511550	15511607	1360	16	6	14	57	'7-7	67.53	3.6	3.0	intron	Eip71CD +	chr3L_14_15510001	chr3L_15510001	0.50	RAL-227
281	chr3L	15525967	15526040	roo	8670	407	13	73	'6-7	62.72	4.2	2.5	exon	CG33985 -	chr3L_13_15525001	chr3L_15525001	0.46	RAL-227
282	chr3L	15591135	15591186	mdg3	218	5254	11	51	'2-9	61.06	4.5	2.0	intron	RhoGAP71E +	chr3L_11_15590001	chr3L_15590001	0.18	RAL-227
283	chr3L	16371483	16371542	1360	19	1	12	59	'5-7	68.89	2.4	3.5	3` UTR	roq -	chr3L_12_16370001	chr3L_16370001	0.42	RAL-227
284	chr3L	16695052	16695127	roo	404	1	15	75	'7-8	69.34	3.2	3.6	intron,intron,intron	Lasp -,CG43954 -,CR45179 +	chr3L_15_16695001	chr3L_16695001	0.47	RAL-227
285	chr3L	16754369	16754441	flea	5005	4757	7	72	'1-6	68.59	2.1	2.3	intergenic	not near genes	chr3L_7_16750001	chr3L_16750001	0.14	RAL-227
286	chr3L	17056532	17056596	blood	379	7030	8	64	'6-2	66.01	2.4	2.4	intron	CG7724 +	chr3L_8_17055001	chr3L_17055001	0.75	RAL-227
287	chr3L	17152678	17152755	mdg1	7041	7458	12	77	'6-6	64.91	1.9	4.1	intron	Rbp6 -	chr3L_12_17150001	chr3L_17150001	0.50	RAL-227
288	chr3L	17164847	17164899	opus	21	490	7	52	'2-5	67.25	2.0	2.3	intron	Rbp6 -	chr3L_7_17160001	chr3L_17160001	0.29	RAL-227
289	chr3L	17347430	17347510	mdg3	249	5258	5	80	'2-3	68.42	3.2	1.2	intron	Mip -	chr3L_5_17345001	chr3L_17345001	0.40	RAL-227
290	chr3L	17433121	17433188	P-element	1	9	4	67	'1-3	60.75	2.3	1.2	intron,5` UTR	CG32174 -,frc -	chr3L_4_17430001	chr3L_17430001	0.25	RAL-227
291	chr3L	17678994	17679057	Max-element	5	8526	7	63	'4-3	63.90	3.8	1.5	intron	CG34251 +	chr3L_7_17675001	chr3L_17675001	0.57	RAL-227
292	chr3L	17742475	17742507	I-element	17	5329	8	32	'6-2	63.17	5.2	1.3	intron,3` UTR	Ccn +,CG7460 +	chr3L_8_17740001	chr3L_17740001	0.75	RAL-227
293	chr3L	18180977	18181039	Bari1	20	1704	7	62	'1-6	70.17	1.8	2.5	intron	W -	chr3L_7_18180001	chr3L_18180001	0.14	RAL-227
294	chr3L	18275567	18275593	412	7519	7545	5	26	'3-2	62.65	2.1	1.6	intergenic	not near genes	chr3L_5_18275001	chr3L_18275001	0.60	RAL-227
295	chr3L	18418192	18418210	F-element	29	11	4	18	'2-2	54.67	4.0	0.8	intergenic	not near genes	chr3L_4_18415001	chr3L_18415001	0.50	RAL-227
296	chr3L	18694585	18694650	mdg3	5253	5484	10	65	'8-2	64.76	5.5	1.5	exon	CG6893 +	chr3L_10_18690001	chr3L_18690001	0.80	RAL-227
297	chr3L	18957189	18957239	jockey	4979	6	13	50	'3-10	61.18	4.3	2.5	intergenic	not near genes	chr3L_13_18955001	chr3L_18955001	0.23	RAL-227
298	chr3L	19153612	19153631	R1A1-element	5310	5329	4	19	'3-1	63.09	3.2	1.0	intron	fz2 -	chr3L_4_19150001	chr3L_19150001	0.75	RAL-227
299	chr3L	19274803	19274875	transib2	4	2819	13	72	'9-4	61.42	2.7	3.5	intergenic	not near genes	chr3L_13_19270001	chr3L_19270001	0.69	RAL-227
300	chr3L	19339401	19339419	Tc1	28	10	5	18	'2-3	60.42	2.6	1.4	intergenic	not near genes	chr3L_5_19335001	chr3L_19335001	0.40	RAL-227
301	chr3L	19345231	19345309	roo	8663	405	11	78	'6-5	65.53	2.8	2.9	intron	CG32206 -	chr3L_11_19345001	chr3L_19345001	0.55	RAL-227
302	chr3L	19349089	19349159	hobo	4	2935	6	70	'4-2	61.68	1.6	2.3	intron	CG32206 -	chr3L_6_19345001	chr3L_19345001	0.67	RAL-227
303	chr3L	19349964	19350001	1360	4	3198	10	37	'4-6	57.73	3.8	2.1	intron	CG32206 -	chr3L_10_19345001	chr3L_19345001	0.40	RAL-227
304	chr3L	19861420	19861495	P-element	1	2885	13	75	'4-9	48.19	3.5	2.9	intergenic	CR45433 +,Papss +	chr3L_13_19860001	chr3L_19860001	0.31	RAL-227
305	chr3L	20224154	20224213	Chimpo	177	13	10	59	'6-4	58.21	3.3	2.3	intron	CG17147 +	chr3L_10_20220001	chr3L_20220001	0.60	RAL-227
306	chr3L	20553688	20553766	mdg3	242	5251	8	78	'5-3	60.47	3.6	1.7	intergenic	not near genes	chr3L_8_20550001	chr3L_20550001	0.62	RAL-227
307	chr3L	21044565	21044633	FB	5	4	8	68	'2-6	63.44	3.3	1.9	intron	siz +	chr3L_8_21040001	chr3L_21040001	0.25	RAL-227
308	chr3L	21360737	21360769	blood	31	7010	8	32	'5-3	67.41	3.5	1.8	intron	CG32440 +	chr3L_8_21360001	chr3L_21360001	0.62	RAL-227
309	chr3L	21956233	21956302	mdg3	5497	5263	5	69	'2-3	62.73	4.4	0.9	intron	CG7458 +	chr3L_5_21955001	chr3L_21955001	0.40	RAL-227
310	chr3L	22256262	22256338	gypsy	2	460	8	76	'6-2	66.71	0.8	4.4	intergenic	not near genes	chr3L_8_22255001	chr3L_22255001	0.75	RAL-227
311	chr3L	22399758	22399809	FB	23	2	10	51	'2-8	62.53	2.8	2.6	intron	Ten-m -	chr3L_10_22395001	chr3L_22395001	0.20	RAL-227
312	chr3L	22635699	22635762	hopper	16	1413	7	63	'2-5	64.05	2.6	1.9	intron	CG14459 -	chr3L_7_22635001	chr3L_22635001	0.29	RAL-227
313	chr3L	22642503	22642557	hopper	16	1410	8	54	'4-4	64.37	2.5	2.3	intergenic	not near genes	chr3L_8_22640001	chr3L_22640001	0.50	RAL-227
314	chr3L	22924911	22924933	Idefix	7382	7360	5	22	'3-2	68.80	3.7	1.1	intergenic	not near genes	chr3L_5_22920001	chr3L_22920001	0.60	RAL-227
315	chr3L	23030523	23030585	roo	9055	2	8	62	'1-7	64.14	1.4	3.3	intron	nrm +	chr3L_8_23030001	chr3L_23030001	0.12	RAL-227
316	chr3L	23146484	23146517	1360	3	36	8	33	'6-2	64.85	7.0	1.0	intergenic	not near genes	chr3L_8_23145001	chr3L_23145001	0.75	RAL-227
317	chr3L	23219239	23219300	1360	3379	3381	13	61	'6-7	63.51	2.5	3.7	intron	nAChRalpha4 +	chr3L_13_23215001	chr3L_23215001	0.46	RAL-227
318	chr3L	24153196	24153246	Tabor	7312	6856	6	50	'1-5	67.75	2.3	1.8	intron	Snap25 +	chr3L_6_24150001	chr3L_24150001	0.17	RAL-227
319	chr3L	24925929	24925958	diver	6085	226	4	29	'1-3	67.67	4.9	0.7	intergenic	not near genes	chr3L_4_24925001	chr3L_24925001	0.25	RAL-227
320	chr3L	27356091	27356116	Tc3	1697	1687	5	25	'4-1	73.62	4.1	1.0	intron	Dbp80 +	chr3L_5_27355001	chr3L_27355001	0.80	RAL-227
321	chr3L	27415225	27415302	transib2	2823	3	8	77	'5-3	66.33	4.5	1.5	intron	Dbp80 +	chr3L_8_27415001	chr3L_27415001	0.62	RAL-227
322	chr3R	1022830	1022911	297	6580	392	9	81	'5-4	67.46	3.3	2.1	intergenic	not near genes	chr3R_9_1020001	chr3R_1020001	0.56	RAL-227
323	chr3R	2640884	2640933	copia	234	4879	5	49	'1-4	58.95	0.6	3.1	intron	CG41056 -	chr3R_5_2640001	chr3R_2640001	0.20	RAL-227
324	chr3R	2724259	2724306	blood	7365	7021	4	47	'3-1	69.11	3.0	1.0	intron	CG41056 -	chr3R_4_2720001	chr3R_2720001	0.75	RAL-227
325	chr3R	3753072	3753092	ZAM	458	8400	9	20	'4-5	63.86	5.9	1.3	intergenic	not near genes	chr3R_9_3750001	chr3R_3750001	0.44	RAL-227
326	chr3R	4167995	4168052	1360	3371	4	9	57	'1-8	63.59	1.5	3.6	intergenic	not near genes	chr3R_9_4165001	chr3R_4165001	0.11	RAL-227
327	chr3R	4531388	4531405	Doc	4277	4294	4	17	'2-2	53.67	4.9	0.7	intron	CG34357 -	chr3R_4_4530001	chr3R_4530001	0.50	RAL-227
328	chr3R	4553740	4553762	roo	9037	396	4	22	'2-2	72.34	2.3	1.2	intron	CG34357 -	chr3R_4_4550001	chr3R_4550001	0.50	RAL-227
329	chr3R	4570247	4570288	Juan	2	4195	7	41	'5-2	65.00	2.6	1.9	intergenic	not near genes	chr3R_7_4570001	chr3R_4570001	0.71	RAL-227
330	chr3R	4896294	4896335	I-element	4	5334	5	41	'3-2	60.22	2.1	1.6	intergenic	CR45580 +	chr3R_5_4895001	chr3R_4895001	0.60	RAL-227
331	chr3R	4905960	4906027	rover	333	1	15	67	'7-8	67.00	1.5	6.0	intergenic	not near genes	chr3R_15_4905001	chr3R_4905001	0.47	RAL-227
332	chr3R	5110329	5110410	mdg3	5253	250	13	81	'8-5	67.43	2.5	3.7	intergenic	not near genes	chr3R_13_5110001	chr3R_5110001	0.62	RAL-227
333	chr3R	5345693	5345766	Stalker2	7644	1	17	73	'5-12	60.93	3.3	4.0	intron	mtd -	chr3R_17_5345001	chr3R_5345001	0.29	RAL-227
334	chr3R	5348197	5348252	jockey	4985	4765	11	55	'6-5	60.80	4.2	2.1	intron	mtd -	chr3R_11_5345001	chr3R_5345001	0.55	RAL-227
335	chr3R	5426748	5426797	mdg3	5478	5252	6	49	'1-5	60.99	2.9	1.5	intron,exon	CG14669 +,CG12147 -	chr3R_6_5425001	chr3R_5425001	0.17	RAL-227
336	chr3R	5910321	5910381	412	16	7542	5	60	'3-2	64.89	3.6	1.1	intron	CG34113 -	chr3R_5_5910001	chr3R_5910001	0.60	RAL-227
337	chr3R	5941983	5942038	jockey	4981	7	12	55	'4-8	64.34	4.0	2.4	intron	CG34113 -	chr3R_12_5940001	chr3R_5940001	0.33	RAL-227
338	chr3R	6068287	6068315	jockey	9	22	7	28	'2-5	57.75	2.4	2.1	intergenic	not near genes	chr3R_7_6065001	chr3R_6065001	0.29	RAL-227
339	chr3R	6257900	6257977	Tirant	394	8109	11	77	'5-6	63.51	0.9	5.8	intergenic	not near genes	chr3R_11_6255001	chr3R_6255001	0.45	RAL-227
340	chr3R	6290957	6291025	mdg3	5261	242	6	68	'4-2	65.41	3.1	1.5	intergenic	not near genes	chr3R_6_6290001	chr3R_6290001	0.67	RAL-227
341	chr3R	6341425	6341473	Stalker2	7643	7273	8	48	'6-2	68.42	0.6	5.0	intergenic	Osi20 +	chr3R_8_6340001	chr3R_6340001	0.75	RAL-227
342	chr3R	6546160	6546221	opus	498	19	8	61	'5-3	69.39	3.8	1.7	intron	dpr11 -	chr3R_8_6545001	chr3R_6545001	0.62	RAL-227
343	chr3R	6728437	6728501	mdg3	5273	250	5	64	'2-3	70.13	3.8	1.0	intron	pb -	chr3R_5_6725001	chr3R_6725001	0.40	RAL-227
344	chr3R	6906174	6906237	mdg3	5251	227	5	63	'3-2	62.67	5.6	0.8	intron	Antp -	chr3R_5_6905001	chr3R_6905001	0.60	RAL-227
345	chr3R	6966462	6966508	pogo	2077	5	4	46	'2-2	71.08	2.8	1.1	intron	Antp -	chr3R_4_6965001	chr3R_6965001	0.50	RAL-227
346	chr3R	7100988	7101068	pogo	2098	1	8	80	'5-3	64.88	4.1	1.6	intron	Alh -	chr3R_8_7100001	chr3R_7100001	0.62	RAL-227
347	chr3R	7296650	7296846	hopper	1349	28	16	196	'1-15	64.53	3.4	3.6	intron	rn -	chr3R_16_7295001	chr3R_7295001	0.06	RAL-227
348	chr3R	7475061	7475148	Tc3	237	316	7	87	'1-6	67.89	5.2	1.1	intergenic	snRNA:7SK -	chr3R_7_7475001	chr3R_7475001	0.14	RAL-227
349	chr3R	7491777	7491842	Burdock	6134	237	11	65	'7-4	65.70	4.1	2.2	intron	alpha-Est10 -	chr3R_11_7490001	chr3R_7490001	0.64	RAL-227
350	chr3R	7682568	7682597	Doc	32	2	14	29	'5-9	54.69	4.3	2.6	intron	Nlg1 +	chr3R_14_7680001	chr3R_7680001	0.36	RAL-227
351	chr3R	7970351	7970433	Max-element	302	8235	12	82	'4-8	64.55	2.3	3.6	intergenic	not near genes	chr3R_12_7970001	chr3R_7970001	0.33	RAL-227
352	chr3R	8639266	8639349	ZAM	7966	458	16	83	'5-11	64.88	3.3	3.7	intergenic	not near genes	chr3R_16_8635001	chr3R_8635001	0.31	RAL-227
353	chr3R	8884392	8884410	roo	22	9	7	18	'5-2	64.79	2.2	2.2	intron	pyd -	chr3R_7_8880001	chr3R_8880001	0.71	RAL-227
354	chr3R	9003736	9003806	Max-element	8234	8525	4	70	'2-2	66.59	3.7	0.9	intergenic	CG31100 -,CG11980 +	chr3R_4_9000001	chr3R_9000001	0.50	RAL-227
355	chr3R	9106180	9106255	1360	3388	3	12	75	'5-7	64.88	4.4	2.2	intron	pum -	chr3R_12_9105001	chr3R_9105001	0.42	RAL-227
356	chr3R	9158102	9158163	P-element	2872	1	8	61	'3-5	56.86	5.4	1.2	intron	pum -	chr3R_8_9155001	chr3R_9155001	0.38	RAL-227
357	chr3R	9166200	9166254	roo	9067	22	11	54	'4-7	69.94	3.1	2.7	intron	pum -	chr3R_11_9165001	chr3R_9165001	0.36	RAL-227
358	chr3R	9192380	9192405	pogo	1	27	7	25	'5-2	63.98	3.1	1.7	intron	pum -	chr3R_7_9190001	chr3R_9190001	0.71	RAL-227
359	chr3R	9229739	9229804	P-element	7	2882	17	65	'6-11	48.14	1.9	5.9	intron,5` UTR	pum -,CR45196 +	chr3R_17_9225001	chr3R_9225001	0.35	RAL-227
360	chr3R	9231894	9231972	roo	2	409	10	78	'6-4	64.38	4.3	1.9	intron	pum -	chr3R_10_9230001	chr3R_9230001	0.60	RAL-227
361	chr3R	9289833	9289855	hopper	1407	1383	8	22	'3-5	64.85	1.7	3.0	intergenic	not near genes	chr3R_8_9285001	chr3R_9285001	0.38	RAL-227
362	chr3R	9347072	9347149	S-element	1713	4	9	77	'4-5	64.68	4.2	1.7	intron	CG45050 +	chr3R_9_9345001	chr3R_9345001	0.44	RAL-227
363	chr3R	9347606	9347681	S-element	1714	7	9	75	'6-3	62.57	2.0	3.0	intron	CG45050 +	chr3R_9_9345001	chr3R_9345001	0.67	RAL-227
364	chr3R	9779488	9779572	Max-element	8231	299	9	84	'5-4	59.10	2.9	2.3	3` UTR	RpS29 +	chr3R_9_9775001	chr3R_9775001	0.56	RAL-227
365	chr3R	10264244	10264306	P-element	2884	2884	14	62	'8-6	49.40	4.8	2.4	intergenic	CG43143 +,pont +	chr3R_14_10260001	chr3R_10260001	0.57	RAL-227
366	chr3R	10369684	10369764	mdg3	5253	5498	4	80	'1-3	65.33	5.7	0.6	intron	Rfx -	chr3R_4_10365001	chr3R_10365001	0.25	RAL-227
367	chr3R	10778972	10779041	Bari1	11	1702	10	69	'4-6	65.34	2.9	2.6	intergenic	not near genes	chr3R_10_10775001	chr3R_10775001	0.40	RAL-227
368	chr3R	10878147	10878213	copia	245	4873	7	66	'2-5	63.05	3.4	1.6	3` UTR	Sodh-2 +	chr3R_7_10875001	chr3R_10875001	0.29	RAL-227
369	chr3R	10942371	10942453	roo	1	411	8	82	'3-5	71.83	3.1	2.0	intergenic	not near genes	chr3R_8_10940001	chr3R_10940001	0.38	RAL-227
370	chr3R	11102994	11103068	roo	408	6	8	74	'6-2	64.78	1.7	3.0	intergenic	not near genes	chr3R_8_11100001	chr3R_11100001	0.75	RAL-227
371	chr3R	11163037	11163084	mdg1	409	22	5	47	'2-3	67.03	2.8	1.3	exon	CG4757 +	chr3R_5_11160001	chr3R_11160001	0.40	RAL-227
372	chr3R	11189644	11189724	mdg3	5253	246	8	80	'4-4	63.43	2.3	2.4	intergenic	not near genes	chr3R_8_11185001	chr3R_11185001	0.50	RAL-227
373	chr3R	11553658	11553733	hopper	1410	1	8	75	'3-5	65.40	3.4	1.8	intergenic	CG14708 +	chr3R_8_11550001	chr3R_11550001	0.38	RAL-227
374	chr3R	11624843	11624888	Stalker2	387	7251	5	45	'3-2	45.83	3.5	1.1	intron,3` UTR	CG6808 -,CG14711 +	chr3R_5_11620001	chr3R_11620001	0.60	RAL-227
375	chr3R	11937226	11937260	pogo	2075	22	4	34	'2-2	76.48	2.4	1.2	intron	Cad87A -	chr3R_4_11935001	chr3R_11935001	0.50	RAL-227
376	chr3R	12087022	12087040	297	388	6951	4	18	'1-3	67.33	4.4	0.7	intron	CG14741 -	chr3R_4_12085001	chr3R_12085001	0.25	RAL-227
377	chr3R	12151963	12151985	jockey	31	11	18	22	'8-10	60.04	5.7	2.7	intron	dpr15 -	chr3R_18_12150001	chr3R_12150001	0.44	RAL-227
378	chr3R	12384006	12384028	jockey	4697	4677	6	22	'2-4	64.46	2.7	1.6	intron	GstD11 +	chr3R_6_12380001	chr3R_12380001	0.33	RAL-227
379	chr3R	12445114	12445183	1360	6	2	12	69	'5-7	66.62	3.1	2.9	exon	Desat1 +	chr3R_12_12445001	chr3R_12445001	0.42	RAL-227
380	chr3R	13024200	13024268	mdg3	5256	240	10	68	'5-5	64.15	3.1	2.4	intron	CtBP +	chr3R_10_13020001	chr3R_13020001	0.50	RAL-227
381	chr3R	13225496	13225553	hobo	4	2922	17	57	'10-7	64.45	2.6	4.7	intron	Ace -	chr3R_17_13225001	chr3R_13225001	0.59	RAL-227
382	chr3R	13349518	13349574	Ivk	5370	2	6	56	'2-4	61.45	0.9	3.2	intergenic	not near genes	chr3R_6_13345001	chr3R_13345001	0.33	RAL-227
383	chr3R	13437169	13437228	hopper	6	8	10	59	'4-6	65.75	3.1	2.4	intergenic	not near genes	chr3R_10_13435001	chr3R_13435001	0.40	RAL-227
384	chr3R	13732325	13732352	hopper	26	1388	7	27	'3-4	71.50	5.1	1.1	intron	CG34383 +	chr3R_7_13730001	chr3R_13730001	0.43	RAL-227
385	chr3R	13764342	13764424	opus	7498	110	6	82	'5-1	66.87	2.6	1.7	3` UTR	CG34383 +	chr3R_6_13760001	chr3R_13760001	0.83	RAL-227
386	chr3R	13918923	13918997	mdg3	5259	247	16	74	'8-8	64.00	2.5	4.6	intergenic	not near genes	chr3R_16_13915001	chr3R_13915001	0.50	RAL-227
387	chr3R	13988540	13988601	FB	12	1	16	61	'5-11	63.33	0.4	11.4	intron	rdx -	chr3R_16_13985001	chr3R_13985001	0.31	RAL-227
388	chr3R	14019112	14019135	roo	9036	396	4	23	'1-3	65.00	2.6	1.1	intron	rdx -	chr3R_4_14015001	chr3R_14015001	0.25	RAL-227
389	chr3R	14417839	14417916	roo	404	8663	18	77	'9-9	68.21	3.4	4.1	intron	cv-c -	chr3R_18_14415001	chr3R_14415001	0.50	RAL-227
390	chr3R	14695951	14696006	FB	20	1	9	55	'4-5	62.76	3.5	2.0	intron	Meltrin -	chr3R_9_14695001	chr3R_14695001	0.44	RAL-227
391	chr3R	14766934	14766997	roo	4	9059	11	63	'4-7	63.48	4.5	2.0	intron	jvl +	chr3R_11_14765001	chr3R_14765001	0.36	RAL-227
392	chr3R	14869370	14869425	roo	9052	6	11	55	'3-8	62.30	2.5	3.1	intron	btsz -	chr3R_11_14865001	chr3R_14865001	0.27	RAL-227
393	chr3R	14957945	14958014	mdg3	5252	234	6	69	'2-4	66.36	5.1	1.0	intergenic	not near genes	chr3R_6_14955001	chr3R_14955001	0.33	RAL-227
394	chr3R	14974500	14974566	roo	9	403	11	66	'7-4	65.85	1.0	5.5	intergenic	not near genes	chr3R_11_14970001	chr3R_14970001	0.64	RAL-227
395	chr3R	15128082	15128148	roo	8663	401	4	66	'1-3	60.79	1.7	1.5	intron	CG42788 -	chr3R_4_15125001	chr3R_15125001	0.25	RAL-227
396	chr3R	15157591	15157667	invader3	5185	5457	13	76	'7-6	71.84	3.5	2.9	intron	Gyc88E +	chr3R_13_15155001	chr3R_15155001	0.54	RAL-227
397	chr3R	15480087	15480155	roo	397	1	15	68	'5-10	62.85	4.0	3.0	intergenic	not near genes	chr3R_15_15480001	chr3R_15480001	0.33	RAL-227
398	chr3R	15710999	15711081	flea	253	4754	9	82	'3-6	66.14	3.7	1.9	intergenic	not near genes	chr3R_9_15710001	chr3R_15710001	0.33	RAL-227
399	chr3R	15750994	15751030	I-element	30	5346	5	36	'2-3	66.40	4.8	0.9	intergenic	not near genes	chr3R_5_15750001	chr3R_15750001	0.40	RAL-227
400	chr3R	16006308	16006330	jockey	17	12	7	22	'5-2	54.30	7.0	0.9	intron	CR42839 -	chr3R_7_16005001	chr3R_16005001	0.71	RAL-227
401	chr3R	16022908	16022974	mdg1	11	7455	9	66	'6-3	63.71	2.7	2.4	intergenic	not near genes	chr3R_9_16020001	chr3R_16020001	0.67	RAL-227
402	chr3R	16194517	16194578	flea	248	4770	8	61	'4-4	65.98	2.5	2.3	intron	sra +	chr3R_8_16190001	chr3R_16190001	0.50	RAL-227
403	chr3R	16585390	16585467	roo	8664	405	16	77	'10-6	66.15	3.6	3.5	intergenic	not near genes	chr3R_16_16585001	chr3R_16585001	0.62	RAL-227
404	chr3R	17095924	17095993	17.6	9	7415	7	69	'4-3	63.81	3.1	1.7	intron	cher -	chr3R_7_17095001	chr3R_17095001	0.57	RAL-227
405	chr3R	17486333	17486351	I-element	5330	5348	4	18	'2-2	60.00	6.2	0.6	intron	Dscam3 -	chr3R_4_17485001	chr3R_17485001	0.50	RAL-227
406	chr3R	17649366	17649445	mdg3	5493	5249	20	79	'8-12	63.25	2.5	5.7	intron	CG14322 +	chr3R_20_17645001	chr3R_17645001	0.40	RAL-227
407	chr3R	17712622	17712691	412	12	7545	7	69	'2-5	59.24	3.7	1.5	intron	osa -	chr3R_7_17710001	chr3R_17710001	0.29	RAL-227
408	chr3R	17975617	17975696	blood	377	2	21	79	'8-13	65.86	4.7	3.7	intron	cpo +	chr3R_21_17975001	chr3R_17975001	0.38	RAL-227
409	chr3R	18019610	18019681	pogo	2092	6	6	71	'4-2	61.69	2.1	1.9	intron	DNaseII +	chr3R_6_18015001	chr3R_18015001	0.67	RAL-227
410	chr3R	18064716	18064785	pogo	2092	6	15	69	'7-8	63.48	2.3	4.5	intergenic	not near genes	chr3R_15_18060001	chr3R_18060001	0.47	RAL-227
411	chr3R	18136236	18136295	opus	498	19	7	59	'5-2	61.44	1.3	3.0	intergenic	not near genes	chr3R_7_18135001	chr3R_18135001	0.71	RAL-227
412	chr3R	18743868	18743917	P-element	2879	2866	7	49	'3-4	43.37	3.8	1.5	intergenic	CG7718 -,Mekk1 -	chr3R_7_18740001	chr3R_18740001	0.43	RAL-227
413	chr3R	18851029	18851066	flea	4777	4755	4	37	'2-2	75.64	2.0	1.3	3` UTR	CR45633 -	chr3R_4_18850001	chr3R_18850001	0.50	RAL-227
414	chr3R	19055063	19055144	flea	4754	256	9	81	'5-4	69.65	2.6	2.5	intron	cdi -	chr3R_9_19055001	chr3R_19055001	0.56	RAL-227
415	chr3R	19366523	19366581	mdg3	224	5252	5	58	'1-4	60.70	5.2	0.8	intergenic	not near genes	chr3R_5_19365001	chr3R_19365001	0.20	RAL-227
416	chr3R	19733803	19733874	hobo	2933	1	9	71	'3-6	61.46	2.2	2.8	intron	GluClalpha +	chr3R_9_19730001	chr3R_19730001	0.33	RAL-227
417	chr3R	19787629	19787703	Tabor	6	7323	11	74	'6-5	61.47	2.2	3.4	intergenic	not near genes	chr3R_11_19785001	chr3R_19785001	0.55	RAL-227
418	chr3R	19954531	19954588	Max-element	8512	8235	5	57	'2-3	62.81	3.2	1.2	intron	Hs6st -	chr3R_5_19950001	chr3R_19950001	0.40	RAL-227
419	chr3R	20027914	20027986	P-element	1	5	14	72	'7-7	46.58	1.7	5.2	exon	CG4424 -	chr3R_14_20025001	chr3R_20025001	0.50	RAL-227
420	chr3R	20200549	20200623	Max-element	294	8232	10	74	'4-6	64.16	2.9	2.6	intergenic	not near genes	chr3R_10_20200001	chr3R_20200001	0.40	RAL-227
421	chr3R	20476144	20476220	roo	8667	409	6	76	'4-2	68.09	3.9	1.2	intron	Gfrl -	chr3R_6_20475001	chr3R_20475001	0.67	RAL-227
422	chr3R	20613467	20613533	mdg3	234	5253	5	66	'1-4	64.02	6.4	0.7	exon	CG15923 -	chr3R_5_20610001	chr3R_20610001	0.20	RAL-227
423	chr3R	20750418	20750522	mdg3	5168	244	10	104	'5-5	63.18	3.2	2.4	intron	CG42322 +	chr3R_10_20750001	chr3R_20750001	0.50	RAL-227
424	chr3R	20930041	20930119	roo	8661	404	7	78	'3-4	68.14	1.6	2.7	intron	CG31191 -	chr3R_7_20930001	chr3R_20930001	0.43	RAL-227
425	chr3R	21152044	21152126	S-element	1712	1710	6	82	'3-3	63.58	1.0	3.0	intron	SNF4Agamma +	chr3R_6_21150001	chr3R_21150001	0.50	RAL-227
426	chr3R	21203641	21203669	jockey	4704	4677	5	28	'3-2	59.24	3.8	1.0	intron	SNF4Agamma +	chr3R_5_21200001	chr3R_21200001	0.60	RAL-227
427	chr3R	21245748	21245801	flea	23	5009	5	53	'2-3	66.67	2.4	1.5	intergenic	CG5892 +	chr3R_5_21245001	chr3R_21245001	0.40	RAL-227
428	chr3R	21255959	21255999	hobo	2934	6	7	40	'3-4	69.36	5.5	1.1	intron	ETHR +	chr3R_7_21255001	chr3R_21255001	0.43	RAL-227
429	chr3R	21501918	21501981	roo	8664	9055	10	63	'8-2	65.45	3.7	2.1	intron	C15 +	chr3R_10_21500001	chr3R_21500001	0.80	RAL-227
430	chr3R	21547452	21547519	Max-element	8244	296	10	67	'3-7	64.24	3.5	2.2	intergenic	not near genes	chr3R_10_21545001	chr3R_21545001	0.30	RAL-227
431	chr3R	21758528	21758548	Juan	4201	4181	5	20	'4-1	65.70	10.1	0.5	intergenic	CG42335 +	chr3R_5_21755001	chr3R_21755001	0.80	RAL-227
432	chr3R	22141944	22141996	FB	9	12	5	52	'4-1	61.07	2.0	1.7	intron	SKIP +	chr3R_5_22140001	chr3R_22140001	0.80	RAL-227
433	chr3R	22865201	22865224	hobo	1	24	11	23	'4-7	63.44	7.8	1.2	intergenic	not near genes	chr3R_11_22865001	chr3R_22865001	0.36	RAL-227
434	chr3R	23079561	23079636	mdg1	7039	7457	8	75	'4-4	62.29	2.8	2.1	intron	CG13830 -	chr3R_8_23075001	chr3R_23075001	0.50	RAL-227
435	chr3R	23221357	23221426	copia	250	4875	6	69	'2-4	67.78	4.7	1.1	intron	cnc -	chr3R_6_23220001	chr3R_23220001	0.33	RAL-227
436	chr3R	23346544	23346583	P-element	2871	21	7	39	'5-2	41.00	2.2	2.2	intergenic	pnt -	chr3R_7_23345001	chr3R_23345001	0.71	RAL-227
437	chr3R	23607452	23607534	297	6582	395	12	82	'9-3	67.87	2.7	3.2	intron	CG31145 -	chr3R_12_23605001	chr3R_23605001	0.75	RAL-227
438	chr3R	23723663	23723741	Burdock	253	6137	10	78	'4-6	65.35	3.1	2.4	5` UTR	CG10365 +	chr3R_10_23720001	chr3R_23720001	0.40	RAL-227
439	chr3R	23884417	23884484	FB	7	1	5	67	'3-2	58.36	2.0	1.7	intron	Pli -	chr3R_5_23880001	chr3R_23880001	0.60	RAL-227
440	chr3R	24230339	24230405	Transpac	301	7	9	66	'6-3	61.96	0.5	6.0	intron	CR45217 -	chr3R_9_24230001	chr3R_24230001	0.67	RAL-227
441	chr3R	25093314	25093381	diver	5893	219	11	67	'4-7	66.85	3.3	2.6	intergenic	not near genes	chr3R_11_25090001	chr3R_25090001	0.36	RAL-227
442	chr3R	25289207	25289288	blood	7014	7008	11	81	'5-6	66.25	2.9	2.8	intergenic	CG13658 +	chr3R_11_25285001	chr3R_25285001	0.45	RAL-227
443	chr3R	25371383	25371419	hobo	7	2928	12	36	'7-5	62.68	4.8	2.1	intron	Fur1 -	chr3R_12_25370001	chr3R_25370001	0.58	RAL-227
444	chr3R	25906872	25906953	412	1	494	13	81	'5-8	65.07	4.0	2.6	intergenic	CR43259 -,CG42235 +	chr3R_13_25905001	chr3R_25905001	0.38	RAL-227
445	chr3R	26107704	26107776	copia	4867	245	10	72	'8-2	65.67	3.6	2.2	5` UTR	CG31324 +	chr3R_10_26105001	chr3R_26105001	0.80	RAL-227
446	chr3R	26147431	26147505	roo	9061	8664	4	74	'2-2	64.66	1.4	1.7	intergenic	not near genes	chr3R_4_26145001	chr3R_26145001	0.50	RAL-227
447	chr3R	26274179	26274257	hobo	2	2709	15	78	'10-5	62.82	3.0	3.8	intron	CG6154 +	chr3R_15_26270001	chr3R_26270001	0.67	RAL-227
448	chr3R	26326587	26326657	hobo	2937	1	10	70	'4-6	65.80	2.3	3.0	intron	CG33970 +	chr3R_10_26325001	chr3R_26325001	0.40	RAL-227
449	chr3R	26482472	26482546	mdg3	240	5253	4	74	'3-1	67.57	2.6	1.1	intron	plum -	chr3R_4_26480001	chr3R_26480001	0.75	RAL-227
450	chr3R	26544234	26544307	FB	2	2	14	73	'7-7	67.83	3.4	3.2	intron	scrib +	chr3R_14_26540001	chr3R_26540001	0.50	RAL-227
451	chr3R	26556911	26556980	mdg3	5262	247	10	69	'3-7	61.14	2.9	2.6	intron	scrib +	chr3R_10_26555001	chr3R_26555001	0.30	RAL-227
452	chr3R	26698437	26698500	Max-element	299	12	8	63	'4-4	59.49	3.5	1.8	3` UTR	amon -	chr3R_8_26695001	chr3R_26695001	0.50	RAL-227
453	chr3R	27148628	27148682	FB	4	19	10	54	'3-7	69.54	2.3	3.0	intron	CG6051 -	chr3R_10_27145001	chr3R_27145001	0.30	RAL-227
454	chr3R	27238217	27238298	mdg3	5256	250	12	81	'8-4	68.44	3.9	2.4	intron	CG31064 -	chr3R_12_27235001	chr3R_27235001	0.67	RAL-227
455	chr3R	27907331	27907394	diver	206	5887	12	63	'3-9	61.42	3.1	2.9	intergenic	not near genes	chr3R_12_27905001	chr3R_27905001	0.25	RAL-227
456	chr3R	28206071	28206134	pogo	2081	1	8	63	'1-7	67.67	2.8	2.1	intron	CG34354 +	chr3R_8_28205001	chr3R_28205001	0.12	RAL-227
457	chr3R	28406708	28406769	412	494	7074	7	61	'5-2	60.11	2.9	1.8	intergenic	not near genes	chr3R_7_28405001	chr3R_28405001	0.71	RAL-227
458	chr3R	28411922	28412003	HMS-Beagle	247	1	17	81	'6-11	70.38	3.8	3.5	intergenic	not near genes	chr3R_17_28410001	chr3R_28410001	0.35	RAL-227
459	chr3R	28849534	28849615	roo	8661	406	11	81	'4-7	67.25	2.7	3.0	intron	spg +	chr3R_11_28845001	chr3R_28845001	0.36	RAL-227
460	chr3R	28932245	28932315	Max-element	10	300	4	70	'2-2	62.88	3.2	1.0	intron	CG14521 -	chr3R_4_28930001	chr3R_28930001	0.50	RAL-227
461	chr3R	29088265	29088305	P-element	2856	1	6	40	'2-4	46.45	1.7	2.2	intron	CG11873 +	chr3R_6_29085001	chr3R_29085001	0.33	RAL-227
462	chr3R	29188299	29188351	mdg3	5252	220	6	52	'4-2	69.06	4.6	1.1	intron	CG14509 -	chr3R_6_29185001	chr3R_29185001	0.67	RAL-227
463	chr3R	29217601	29217671	P-element	2883	2	10	70	'7-3	48.85	3.2	2.4	5` UTR	CR31044 +	chr3R_10_29215001	chr3R_29215001	0.70	RAL-227
464	chr3R	29235177	29235251	flea	4758	249	6	74	'3-3	65.11	2.5	1.7	3` UTR	CG15817 +	chr3R_6_29235001	chr3R_29235001	0.50	RAL-227
465	chr3R	29370978	29371049	hobo	2710	5	7	71	'5-2	67.02	3.7	1.5	intergenic	not near genes	chr3R_7_29370001	chr3R_29370001	0.71	RAL-227
466	chr3R	29391905	29391961	Stalker2	16	394	6	56	'3-3	56.93	2.7	1.6	intron	Ptp99A +	chr3R_6_29390001	chr3R_29390001	0.50	RAL-227
467	chr3R	29867314	29867341	mdg3	5284	5258	4	27	'2-2	64.91	6.3	0.5	intron	Zip99C -	chr3R_4_29865001	chr3R_29865001	0.50	RAL-227
468	chr3R	29952750	29952784	invader4	299	327	8	34	'2-6	68.17	1.6	3.1	intron	TkR99D -	chr3R_8_29950001	chr3R_29950001	0.25	RAL-227
469	chr3R	29976111	29976138	F-element	4671	4644	8	27	'6-2	60.59	3.9	1.6	intergenic	not near genes	chr3R_8_29975001	chr3R_29975001	0.75	RAL-227
470	chr3R	29976473	29976500	F-element	38	11	9	27	'2-7	60.03	2.7	2.4	intergenic	not near genes	chr3R_9_29975001	chr3R_29975001	0.22	RAL-227
471	chr3R	30088067	30088145	mdg3	5251	242	10	78	'9-1	67.96	4.0	2.0	intron	sima +	chr3R_10_30085001	chr3R_30085001	0.90	RAL-227
472	chr3R	30223477	30223555	Max-element	8527	8235	14	78	'4-10	60.95	2.4	4.1	intergenic	not near genes	chr3R_14_30220001	chr3R_30220001	0.29	RAL-227
473	chr3R	30310466	30310543	mdg3	247	5257	5	77	'4-1	62.13	4.2	1.0	intron	hdc +	chr3R_5_30310001	chr3R_30310001	0.80	RAL-227
474	chr3R	30337526	30337588	pogo	2089	8	11	62	'7-4	69.36	2.8	2.9	intron	hdc +	chr3R_11_30335001	chr3R_30335001	0.64	RAL-227
475	chr3R	31141578	31141652	Max-element	8237	296	9	74	'3-6	60.07	3.9	1.8	intron	Gycbeta100B +	chr3R_9_31140001	chr3R_31140001	0.33	RAL-227
476	chr3R	31507594	31507670	roo	8664	404	14	76	'7-7	67.52	3.0	3.5	intergenic	not near genes	chr3R_14_31505001	chr3R_31505001	0.50	RAL-227
477	chr3R	31530996	31531077	roo	3	412	13	81	'7-6	66.66	3.5	2.9	intergenic	not near genes	chr3R_13_31530001	chr3R_31530001	0.54	RAL-227
478	chr3R	31678057	31678139	Transpac	4918	310	12	82	'3-9	64.97	3.1	2.9	intergenic	CG1815 +,CG11550 -	chr3R_12_31675001	chr3R_31675001	0.25	RAL-227
479	chr3R	31815928	31816003	flea	255	4763	11	75	'8-3	67.80	2.9	2.8	intron	RhoGAP100F +	chr3R_11_31815001	chr3R_31815001	0.73	RAL-227
480	chr3R	31817042	31817096	copia	251	4884	9	54	'4-5	65.74	3.9	1.8	intron	RhoGAP100F +	chr3R_9_31815001	chr3R_31815001	0.44	RAL-227
481	chr3R	31905400	31905477	copia	252	4868	11	77	'7-4	63.76	2.4	3.2	intron	heph -	chr3R_11_31905001	chr3R_31905001	0.64	RAL-227
482	chr3R	31965206	31965252	1360	29	4	10	46	'4-6	69.25	2.4	2.9	intron	heph -	chr3R_10_31965001	chr3R_31965001	0.40	RAL-227
483	chr4	630374	630419	copia	224	4	4	45	'1-3	69.67	2.0	1.3	intron	CG1732 +	chr4_4_630001	chr4_630001	0.25	RAL-227
484	chr4	1041907	1041977	pogo	2094	6	13	70	'6-7	62.34	1.9	4.5	intron	CaMKII -	chr4_13_1040001	chr4_1040001	0.46	RAL-227
485	chrX	694534	694615	roo	409	8663	13	81	'3-10	64.42	2.2	4.1	intron	sdk +	chrX_13_690001	chrX_690001	0.23	RAL-227
486	chrX	711737	711819	297	6580	395	6	82	'4-2	64.02	2.4	1.8	intron	sdk +	chrX_6_710001	chrX_710001	0.67	RAL-227
487	chrX	769881	769950	P-element	2883	5	14	69	'6-8	49.81	2.8	3.7	intergenic	fz3 +	chrX_14_765001	chrX_765001	0.43	RAL-227
488	chrX	963973	964042	roo	406	9	8	69	'4-4	66.55	2.0	2.7	intergenic	not near genes	chrX_8_960001	chrX_960001	0.50	RAL-227
489	chrX	976545	976623	copia	256	4871	12	78	'5-7	64.99	2.5	3.4	intergenic	not near genes	chrX_12_975001	chrX_975001	0.42	RAL-227
490	chrX	1229918	1229993	Burdock	251	6139	5	75	'1-4	62.93	3.4	1.1	intron	CG3638 -	chrX_5_1225001	chrX_1225001	0.20	RAL-227
491	chrX	1263826	1263909	mdg3	5253	250	4	83	'2-2	69.38	2.3	1.2	intron	Atf3 -	chrX_4_1260001	chrX_1260001	0.50	RAL-227
492	chrX	1333849	1333910	Transpac	4921	308	14	61	'3-11	58.15	2.9	3.6	intron	CG11409 -	chrX_14_1330001	chrX_1330001	0.21	RAL-227
493	chrX	1418402	1418478	roo	8667	9070	9	76	'5-4	65.52	3.5	2.0	intron	futsch +	chrX_9_1415001	chrX_1415001	0.56	RAL-227
494	chrX	1601917	1601983	mdg3	5492	5250	15	66	'8-7	66.44	3.0	3.8	intron,intron	Mur2B -,br +	chrX_15_1600001	chrX_1600001	0.53	RAL-227
495	chrX	2012158	2012225	P-element	7	3	11	67	'7-4	51.96	1.2	5.0	intergenic	east +	chrX_11_2010001	chrX_2010001	0.64	RAL-227
496	chrX	2329967	2330031	mdg3	5490	5253	6	64	'2-4	62.58	2.4	1.8	intron	phl +	chrX_6_2325001	chrX_2325001	0.33	RAL-227
497	chrX	2336057	2336078	roo	4	25	4	21	'2-2	64.33	2.4	1.2	intron	phl +	chrX_4_2335001	chrX_2335001	0.50	RAL-227
498	chrX	2559948	2560031	roo	8663	411	12	83	'6-6	67.68	4.4	2.2	intron	Pdfr +	chrX_12_2555001	chrX_2555001	0.50	RAL-227
499	chrX	2566879	2566907	opus	7114	26	6	28	'3-3	66.67	3.5	1.3	intron	Pdfr +	chrX_6_2565001	chrX_2565001	0.50	RAL-227
500	chrX	2898881	2898947	Stalker4	6971	409	5	66	'2-3	65.87	1.7	1.9	intron	kirre +	chrX_5_2895001	chrX_2895001	0.40	RAL-227
501	chrX	3047878	3047904	mdg3	28	5254	4	26	'1-3	66.12	1.8	1.4	intron	kirre +	chrX_4_3045001	chrX_3045001	0.25	RAL-227
502	chrX	3207313	3207361	roo	24	401	5	48	'1-4	69.36	0.8	2.8	intron	dnc +	chrX_5_3205001	chrX_3205001	0.20	RAL-227
503	chrX	3228775	3228846	297	6589	391	7	71	'2-5	65.91	3.2	1.7	intron	dnc +	chrX_7_3225001	chrX_3225001	0.29	RAL-227
504	chrX	3305307	3305375	roo	400	4	5	68	'2-3	61.87	0.5	3.3	intron	dnc +	chrX_5_3305001	chrX_3305001	0.40	RAL-227
505	chrX	3394213	3394280	roo	5	400	12	67	'6-6	65.09	1.8	4.3	intron,intron	CR44999 +,CG12535 -	chrX_12_3390001	chrX_3390001	0.50	RAL-227
506	chrX	3743827	3743892	P-element	2	2883	13	65	'7-6	45.95	3.1	3.2	intron	tlk +	chrX_13_3740001	chrX_3740001	0.54	RAL-227
507	chrX	3765372	3765453	roo	408	8663	10	81	'1-9	64.77	3.2	2.4	intron	tlk +	chrX_10_3765001	chrX_3765001	0.10	RAL-227
508	chrX	3798256	3798328	Tirant	389	8107	10	72	'6-4	61.83	1.4	4.2	intergenic	not near genes	chrX_10_3795001	chrX_3795001	0.60	RAL-227
509	chrX	4180667	4180733	Max-element	292	8240	6	66	'2-4	62.92	2.0	2.0	intron	Fas2 -	chrX_6_4180001	chrX_4180001	0.33	RAL-227
510	chrX	5046932	5046957	P-element	1	2864	8	25	'5-3	59.13	3.1	2.0	intron	CR44833 -	chrX_8_5045001	chrX_5045001	0.62	RAL-227
511	chrX	5360337	5360413	roo	407	8666	8	76	'5-3	63.61	2.6	2.2	intron	SK +	chrX_8_5360001	chrX_5360001	0.62	RAL-227
512	chrX	5832861	5832902	Max-element	8530	8258	6	41	'3-3	61.17	2.1	1.9	intron	CG15765 +	chrX_6_5830001	chrX_5830001	0.50	RAL-227
513	chrX	6545714	6545787	pogo	4	2095	8	73	'4-4	67.84	2.0	2.7	intron	CG34417 +	chrX_8_6545001	chrX_6545001	0.50	RAL-227
514	chrX	6593259	6593321	Max-element	8530	13	6	62	'4-2	58.58	1.9	2.1	intron	Pat1 +	chrX_6_6590001	chrX_6590001	0.67	RAL-227
515	chrX	6861840	6861905	P-element	2886	12	8	65	'7-1	50.20	2.7	2.2	intron,5` UTR	CG14434 -,CR45531 +	chrX_8_6860001	chrX_6860001	0.88	RAL-227
516	chrX	6871604	6871678	S-element	1	1707	6	74	'5-1	63.57	1.7	2.2	intron	CG43736 +	chrX_6_6870001	chrX_6870001	0.83	RAL-227
517	chrX	6904582	6904655	mdg3	5264	5498	6	73	'3-3	64.03	2.2	1.9	intergenic	not near genes	chrX_6_6900001	chrX_6900001	0.50	RAL-227
518	chrX	7195976	7196042	P-element	2880	2882	11	66	'5-6	49.76	1.9	3.8	intron,intron	CG9650 +,CR44357 -	chrX_11_7195001	chrX_7195001	0.45	RAL-227
519	chrX	7537569	7537649	Burdock	256	6139	11	80	'5-6	67.65	2.3	3.3	intron	CG32719 -	chrX_11_7535001	chrX_7535001	0.45	RAL-227
520	chrX	7559698	7559827	mdg3	5214	246	7	129	'1-6	66.29	2.5	2.0	intergenic	not near genes	chrX_7_7555001	chrX_7555001	0.14	RAL-227
521	chrX	7972686	7972736	1360	6	1	7	50	'3-4	68.47	3.1	1.7	intron	sn +	chrX_7_7970001	chrX_7970001	0.43	RAL-227
522	chrX	8173703	8173778	mdg3	250	5262	13	75	'5-8	64.14	2.3	3.9	intron	slpr -	chrX_13_8170001	chrX_8170001	0.38	RAL-227
523	chrX	8894303	8894361	P-element	17	3	7	58	'2-5	51.28	2.2	2.2	intron	Moe -	chrX_7_8890001	chrX_8890001	0.29	RAL-227
524	chrX	9314453	9314512	412	495	7075	8	59	'6-2	61.00	3.3	1.9	intergenic	CR44534 +	chrX_8_9310001	chrX_9310001	0.75	RAL-227
525	chrX	9435298	9435356	Transpac	4927	296	9	58	'5-4	63.38	1.9	3.1	intron	mgl -	chrX_9_9435001	chrX_9435001	0.56	RAL-227
526	chrX	9514143	9514212	McClintock	5	6428	9	69	'5-4	69.41	2.8	2.4	intron	CG32700 -	chrX_9_9510001	chrX_9510001	0.56	RAL-227
527	chrX	9540089	9540117	Doc	6	34	7	28	'4-3	68.76	3.5	1.6	intron	CG32700 -	chrX_7_9540001	chrX_9540001	0.57	RAL-227
528	chrX	9576532	9576583	FB	9	17	11	51	'6-5	67.79	2.4	3.2	intron	CG32699 -	chrX_11_9575001	chrX_9575001	0.55	RAL-227
529	chrX	10104179	10104223	FB	30	1	8	44	'2-6	67.17	4.3	1.5	intron	RhoU +	chrX_8_10100001	chrX_10100001	0.25	RAL-227
530	chrX	10119568	10119617	FB	24	17	5	49	'2-3	59.09	1.7	1.9	intron,intron	RhoU +,CR44894 -	chrX_5_10115001	chrX_10115001	0.40	RAL-227
531	chrX	10300845	10300923	roo	410	8668	14	78	'8-6	64.62	3.0	3.5	intron	alpha-Man-I -	chrX_14_10300001	chrX_10300001	0.57	RAL-227
532	chrX	10416009	10416075	roo	8667	399	7	66	'4-3	66.60	2.5	2.0	intron	CG32683 -	chrX_7_10415001	chrX_10415001	0.57	RAL-227
533	chrX	10523746	10523793	I-element	8	5342	4	47	'2-2	61.52	2.1	1.3	intron	spri -	chrX_4_10520001	chrX_10520001	0.50	RAL-227
534	chrX	11046399	11046465	pogo	2095	11	6	66	'5-1	71.98	1.5	2.4	intron	CG11160 +	chrX_6_11045001	chrX_11045001	0.83	RAL-227
535	chrX	11270616	11270692	3S18	341	5770	10	76	'1-9	65.98	3.5	2.2	intron	CG44422 -	chrX_10_11270001	chrX_11270001	0.10	RAL-227
536	chrX	11980433	11980475	Max-element	9	271	4	42	'3-1	63.39	2.8	1.1	intron	cac -	chrX_4_11980001	chrX_11980001	0.75	RAL-227
537	chrX	12320925	12320953	I-element	32	4	10	28	'7-3	64.94	1.5	4.0	intron	Ten-a +	chrX_10_12320001	chrX_12320001	0.70	RAL-227
538	chrX	12399831	12399858	Max-element	8238	8246	4	27	'3-1	57.28	3.0	1.0	intergenic	not near genes	chrX_4_12395001	chrX_12395001	0.75	RAL-227
539	chrX	12426509	12426536	Max-element	8268	280	4	27	'2-2	67.58	1.8	1.4	intergenic	not near genes	chrX_4_12425001	chrX_12425001	0.50	RAL-227
540	chrX	12428918	12428988	roo	3	9064	6	70	'2-4	67.33	1.9	2.1	intergenic	not near genes	chrX_6_12425001	chrX_12425001	0.33	RAL-227
541	chrX	12760643	12760663	P-element	2856	2874	5	20	'1-4	45.07	1.0	2.5	3` UTR	CG12717 -	chrX_5_12760001	chrX_12760001	0.20	RAL-227
542	chrX	12840486	12840549	jockey	4993	13	13	63	'5-8	60.76	1.4	5.4	intron	Pde9 -	chrX_13_12840001	chrX_12840001	0.38	RAL-227
543	chrX	12857850	12857924	roo	403	8665	7	74	'4-3	67.43	2.9	1.8	intron	Pde9 -	chrX_7_12855001	chrX_12855001	0.57	RAL-227
544	chrX	13372737	13372798	blood	362	3	13	61	'3-10	66.65	4.1	2.5	intron	CG1640 +	chrX_13_13370001	chrX_13370001	0.23	RAL-227
545	chrX	13438690	13438720	BS	5023	4993	4	30	'2-2	61.46	3.4	0.9	intergenic	not near genes	chrX_4_13435001	chrX_13435001	0.50	RAL-227
546	chrX	13516752	13516832	mdg3	247	5252	13	80	'5-8	63.23	3.3	3.0	intron	Neto +	chrX_13_13515001	chrX_13515001	0.38	RAL-227
547	chrX	14312174	14312246	hobo	2710	7	4	72	'2-2	66.00	1.7	1.5	intergenic	not near genes	chrX_4_14310001	chrX_14310001	0.50	RAL-227
548	chrX	14319175	14319195	opus	7496	7476	6	20	'2-4	70.81	7.3	0.7	intergenic	not near genes	chrX_6_14315001	chrX_14315001	0.33	RAL-227
549	chrX	14498041	14498117	hobo	2708	5	12	76	'3-9	62.69	2.3	3.6	intergenic	not near genes	chrX_12_14495001	chrX_14495001	0.25	RAL-227
550	chrX	14997608	14997667	mdg3	247	5275	8	59	'5-3	61.90	3.7	1.7	intron	eag +	chrX_8_14995001	chrX_14995001	0.62	RAL-227
551	chrX	15195278	15195295	297	27	6	5	17	'4-1	67.80	3.4	1.1	intergenic	not near genes	chrX_5_15195001	chrX_15195001	0.80	RAL-227
552	chrX	15282248	15282305	hobo	2929	11	4	57	'2-2	64.09	2.2	1.2	intergenic	not near genes	chrX_4_15280001	chrX_15280001	0.50	RAL-227
553	chrX	15405426	15405502	roo	6	408	10	76	'5-5	61.57	1.1	4.8	intron	Cngl -	chrX_10_15405001	chrX_15405001	0.50	RAL-227
554	chrX	15419404	15419480	blood	7010	376	21	76	'6-15	63.79	2.7	5.7	intron	Cngl -	chrX_21_15415001	chrX_15415001	0.29	RAL-227
555	chrX	16256465	16256529	mdg3	5264	5497	10	64	'5-5	66.22	3.4	2.3	intergenic	not near genes	chrX_10_16255001	chrX_16255001	0.50	RAL-227
556	chrX	16386837	16386862	Stalker2	7248	25	5	25	'2-3	62.40	4.1	1.0	intron	CG4239 +	chrX_5_16385001	chrX_16385001	0.40	RAL-227
557	chrX	16921259	16921337	mdg3	5495	5252	9	78	'4-5	61.99	1.6	3.5	intron	CG4928 +	chrX_9_16920001	chrX_16920001	0.44	RAL-227
558	chrX	16980413	16980484	springer	7151	7525	6	71	'3-3	64.78	2.7	1.6	intron	CG45002 -	chrX_6_16980001	chrX_16980001	0.50	RAL-227
559	chrX	17038893	17038972	mdg3	5252	244	7	79	'5-2	67.67	3.7	1.5	intron	CG45002 -	chrX_7_17035001	chrX_17035001	0.71	RAL-227
560	chrX	17676846	17676898	mdg3	5492	5267	9	52	'5-4	66.96	2.0	3.0	intron	chas -	chrX_9_17675001	chrX_17675001	0.56	RAL-227
561	chrX	17712470	17712519	I-element	5334	5269	9	49	'5-4	64.42	3.1	2.2	intron	CG42684 +	chrX_9_17710001	chrX_17710001	0.56	RAL-227
562	chrX	17836694	17836771	roo	405	1	10	77	'5-5	65.50	0.4	7.1	intron	CG6398 +	chrX_10_17835001	chrX_17835001	0.50	RAL-227
563	chrX	17871582	17871607	pogo	2	27	6	25	'5-1	62.57	5.0	1.0	intron	mnb -	chrX_6_17870001	chrX_17870001	0.83	RAL-227
564	chrX	18239063	18239090	jockey	4558	4585	10	27	'8-2	60.27	4.2	1.9	intergenic	not near genes	chrX_10_18235001	chrX_18235001	0.80	RAL-227
565	chrX	18471149	18471205	Juan	4201	4079	6	56	'4-2	59.34	2.3	1.8	intron	CG32547 -	chrX_6_18470001	chrX_18470001	0.67	RAL-227
566	chrX	18589106	18589160	blood	7389	3	10	54	'8-2	64.69	3.5	2.2	intergenic	not near genes	chrX_10_18585001	chrX_18585001	0.80	RAL-227
567	chrX	19005453	19005529	roo	8666	406	11	76	'3-8	66.42	2.6	3.1	intron	CG43759 +	chrX_11_19005001	chrX_19005001	0.27	RAL-227
568	chrX	19123675	19123734	412	487	7069	5	59	'1-4	65.60	2.0	1.7	intergenic	CG15882 -	chrX_5_19120001	chrX_19120001	0.20	RAL-227
569	chrX	19155547	19155592	mdg3	5262	220	5	45	'4-1	65.17	2.6	1.4	intron	RhoGAP18B -	chrX_5_19155001	chrX_19155001	0.80	RAL-227
570	chrX	19709622	19709679	mdg3	236	5266	4	57	'1-3	56.67	0.6	2.5	intron	meso18E -	chrX_4_19705001	chrX_19705001	0.25	RAL-227
571	chrX	20026500	20026575	roo	8665	404	8	75	'3-5	68.70	2.4	2.4	intron	Dop2R -	chrX_8_20025001	chrX_20025001	0.38	RAL-227
572	chrX	20366389	20366457	HMS-Beagle	243	6807	13	68	'7-6	66.46	3.1	3.2	intergenic	not near genes	chrX_13_20365001	chrX_20365001	0.54	RAL-227
573	chrX	20437818	20437842	F-element	12	36	4	24	'2-2	61.00	2.9	1.0	intron	CG1695 +	chrX_4_20435001	chrX_20435001	0.50	RAL-227
574	chrX	20710934	20710992	flea	5002	10	4	58	'2-2	63.09	3.0	1.0	intergenic	not near genes	chrX_4_20710001	chrX_20710001	0.50	RAL-227
575	chrX	20950782	20950861	mdg3	5498	5254	7	79	'4-3	62.64	1.5	2.8	intergenic	not near genes	chrX_7_20950001	chrX_20950001	0.57	RAL-227
576	chrX	20990297	20990366	blood	2	7382	13	69	'5-8	62.85	4.1	2.5	intergenic	not near genes	chrX_13_20990001	chrX_20990001	0.38	RAL-227
577	chrX	21014982	21015008	hobo	4	19	5	26	'4-1	57.39	4.0	1.0	intergenic	not near genes	chrX_5_21010001	chrX_21010001	0.80	RAL-227
578	chrX	21204988	21205134	1360	1	128	6	146	'3-3	52.64	0.0	6.0	intergenic	CG32521 -	chrX_6_21200001	chrX_21200001	0.50	RAL-227
579	chrX	21366212	21366277	P-element	2877	2885	7	65	'4-3	48.88	3.9	1.4	intron,intron	bbx +,waw +	chrX_7_21365001	chrX_21365001	0.57	RAL-227
580	chrX	21399403	21399474	pogo	6	2097	13	71	'7-6	62.69	1.9	4.5	intergenic	not near genes	chrX_13_21395001	chrX_21395001	0.54	RAL-227
581	chrX	21637917	21637973	412	7522	1	9	56	'3-6	63.52	1.3	3.9	intergenic	not near genes	chrX_9_21635001	chrX_21635001	0.33	RAL-227
582	chrX	21667900	21667930	gypsy2	28	5	7	30	'3-4	62.45	0.0	7.0	intergenic	not near genes	chrX_7_21665001	chrX_21665001	0.43	RAL-227
583	chrX	22575292	22575369	flea	4758	5011	8	77	'2-6	68.53	2.1	2.6	intergenic	not near genes	chrX_8_22575001	chrX_22575001	0.25	RAL-227
584	chrX	22821542	22821616	Tabor	3	484	8	74	'5-3	65.61	2.3	2.4	intergenic	not near genes	chrX_8_22820001	chrX_22820001	0.62	RAL-227
585	chrY	986885	986901	HeT-A	5648	5812	5	16	'1-4	65.73	0.0	5.0	intergenic	not near genes	chrY_5_985001	chrY_985001	0.20	RAL-227
586	chrY	3648869	3648886	Stalker2	205	7470	4	17	'2-2	69.00	0.8	2.2	intergenic	not near genes	chrY_4_3645001	chrY_3645001	0.50	RAL-227