SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47445 47446 chr2L 52570 52571 jockey 5 5125 14.5 11.5 13.0 0.4 5126 chr2L 47445 intron Cda5 - chr2L 50008 intron Cda5 - chr2L 52571 intron Cda5 - chr2L_5_50001 chr2L_50001 RAL-21 2 chr2L 47454 47488 chr2L 52563 52613 jockey 18 5122 8.5 10.0 9.2 1.8 5159 chr2L 47454 intron Cda5 - chr2L 50034 intron Cda5 - chr2L 52613 intron Cda5 - chr2L_18_50001 chr2L_50001 RAL-21 3 chr2L 45961 45981 chr2L 53378 53395 jockey 4 7415 16.5 30.0 23.2 0.2 7434 chr2L 45961 intron Cda5 - chr2L 49678 intron Cda5 - chr2L 53395 intron Cda5 - chr2L_4_45001 chr2L_45001 RAL-21 4 chr2L 45956 46002 chr2L 53398 53416 jockey 5 7421 17.0 27.0 22.0 0.2 7460 chr2L 45956 intron Cda5 - chr2L 49686 intron Cda5 - chr2L 53416 intron Cda5 - chr2L_5_45001 chr2L_45001 RAL-21 5 chr2L 263280 263316 chr2L 263446 263482 10 164 2.5 3.0 2.8 2.6 202 chr2L 263280 intron,3` UTR CG3645 -,CG17075 - chr2L 263381 intron,3` UTR CG3645 -,CG17075 - chr2L 263482 intron,3` UTR CG3645 -,CG17075 - chr2L_10_260001 chr2L_260001 RAL-21 6 chr2L 347878 347915 chr2L 355391 355434 blood 13 7515 5.0 5.5 5.2 2.1 7556 chr2L 347878 3` UTR Plc21C + chr2L 351656 intron Plc21C + chr2L 355434 3` UTR Plc21C + chr2L_13_350001 chr2L_350001 RAL-21 7 chr2L 371426 371456 chr2L 371523 371555 9 98 5.0 6.5 5.8 1.3 129 chr2L 371426 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371555 intergenic not near genes chr2L_9_370001 chr2L_370001 RAL-21 8 chr2L 467353 467496 chr2L 467472 467605 17 112 3.0 3.5 3.2 4.0 252 chr2L 467353 intron CG4297 - chr2L 467479 intron CG4297 - chr2L 467605 intron CG4297 - chr2L_17_465001 chr2L_465001 RAL-21 9 chr2L 630322 630332 chr2L 630414 630433 5 103 0.0 2.0 1.0 2.5 111 chr2L 630322 intergenic not near genes chr2L 630378 intergenic not near genes chr2L 630433 intergenic not near genes chr2L_5_630001 chr2L_630001 RAL-21 10 chr2L 632690 632735 chr2L 632785 632834 8 94 2.0 0.5 1.2 3.6 144 chr2L 632690 intergenic not near genes chr2L 632762 intergenic not near genes chr2L 632834 intergenic not near genes chr2L_8_630001 chr2L_630001 RAL-21 11 chr2L 686920 686939 chr2L 695980 695998 roo 4 9059 1.5 5.0 3.2 1.0 9078 chr2L 686920 intron ds - chr2L 691459 intron ds - chr2L 695998 intron ds - chr2L_4_690001 chr2L_690001 RAL-21 12 chr2L 736864 736903 chr2L 736989 737028 10 125 4.0 5.0 4.5 1.8 164 chr2L 736864 intergenic Eaat2 - chr2L 736946 intergenic Eaat2 - chr2L 737028 intergenic Eaat2 - chr2L_10_735001 chr2L_735001 RAL-21 13 chr2L 764539 764575 chr2L 764659 764694 6 120 3.0 3.0 3.0 1.5 155 chr2L 764539 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764694 intergenic not near genes chr2L_6_760001 chr2L_760001 RAL-21 14 chr2L 770454 770487 chr2L 772250 772287 Bari1 4 1792 1.0 0.0 0.5 2.7 1833 chr2L 770454 intergenic not near genes chr2L 771370 intergenic not near genes chr2L 772287 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-21 15 chr2L 802469 802507 chr2L 802810 802848 7 340 2.0 5.0 3.5 1.6 379 chr2L 802469 intergenic not near genes chr2L 802658 intergenic not near genes chr2L 802848 intergenic not near genes chr2L_7_800001 chr2L_800001 RAL-21 16 chr2L 849458 849478 chr2L 849568 849589 5 107 3.0 6.0 4.5 0.9 131 chr2L 849458 intron drongo - chr2L 849524 intron drongo - chr2L 849589 intron drongo - chr2L_5_845001 chr2L_845001 RAL-21 17 chr2L 877834 877874 chr2L 877935 877964 4 98 2.5 1.0 1.8 1.4 130 chr2L 877834 3` UTR,exon CG15824 -,ninaA + chr2L 877899 3` UTR,intron CG15824 -,ninaA + chr2L 877964 3` UTR,intron CG15824 -,ninaA + chr2L_4_875001 chr2L_875001 RAL-21 18 chr2L 976859 976876 chr2L 984515 984532 roo 4 7656 7.5 1.5 4.5 0.7 7673 chr2L 976859 intergenic not near genes chr2L 980696 intergenic not near genes chr2L 984532 intergenic not near genes chr2L_4_980001 chr2L_980001 RAL-21 19 chr2L 996709 996748 chr2L 1005824 1005863 roo 9 9115 2.0 1.5 1.8 3.2 9154 chr2L 996709 intergenic not near genes chr2L 1001286 intergenic not near genes chr2L 1005863 intergenic not near genes chr2L_9_1000001 chr2L_1000001 RAL-21 20 chr2L 1035554 1035594 chr2L 1035635 1035690 12 92 2.5 2.0 2.2 3.8 136 chr2L 1035554 intron IA-2 - chr2L 1035622 intron IA-2 - chr2L 1035690 intron IA-2 - chr2L_12_1035001 chr2L_1035001 RAL-21 21 chr2L 1041073 1041109 chr2L 1041242 1041278 12 168 3.0 0.5 1.8 4.3 205 chr2L 1041073 intron IA-2 - chr2L 1041176 intron IA-2 - chr2L 1041278 intron IA-2 - chr2L_12_1040001 chr2L_1040001 RAL-21 22 chr2L 1042600 1042612 chr2L 1042697 1042709 7 97 2.0 0.0 1.0 3.5 109 chr2L 1042600 intron IA-2 - chr2L 1042654 intron IA-2 - chr2L 1042709 intron IA-2 - chr2L_7_1040001 chr2L_1040001 RAL-21 23 chr2L 1156847 1156887 chr2L 1156972 1157012 4 124 3.5 3.5 3.5 0.9 165 chr2L 1156847 intron capt - chr2L 1156930 intron capt - chr2L 1157012 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-21 24 chr2L 1220112 1220159 chr2L 1227598 1227645 blood 14 7486 5.0 1.0 3.0 3.5 7533 chr2L 1220112 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227645 intron CG42329 + chr2L_14_1220001 chr2L_1220001 RAL-21 25 chr2L 1261134 1261254 chr2L 1261236 1261347 13 101 0.0 0.0 0.0 13.0 213 chr2L 1261134 intron robo3 + chr2L 1261240 intron robo3 + chr2L 1261347 intron robo3 + chr2L_13_1260001 chr2L_1260001 RAL-21 26 chr2L 1322013 1322051 chr2L 1322122 1322160 6 108 2.0 1.5 1.8 2.1 147 chr2L 1322013 intergenic not near genes chr2L 1322086 intergenic not near genes chr2L 1322160 intergenic not near genes chr2L_6_1320001 chr2L_1320001 RAL-21 27 chr2L 1399158 1399191 chr2L 1399300 1399333 12 141 0.0 7.0 3.5 2.7 175 chr2L 1399158 intron lea - chr2L 1399246 intron lea - chr2L 1399333 intron lea - chr2L_12_1395001 chr2L_1395001 RAL-21 28 chr2L 1570672 1570713 chr2L 1573564 1573605 F-element 11 2890 4.0 0.0 2.0 3.7 2933 chr2L 1570672 intron haf + chr2L 1572138 intron haf + chr2L 1573605 intron haf + chr2L_11_1570001 chr2L_1570001 RAL-21 29 chr2L 1635381 1635428 chr2L 1635535 1635584 10 153 0.0 2.5 1.2 4.5 203 chr2L 1635381 intergenic not near genes chr2L 1635482 intergenic not near genes chr2L 1635584 intergenic not near genes chr2L_10_1635001 chr2L_1635001 RAL-21 30 chr2L 1678963 1678997 chr2L 1686448 1686482 blood 10 7485 2.5 6.5 4.5 1.8 7519 chr2L 1678963 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686482 intron chinmo + chr2L_10_1680001 chr2L_1680001 RAL-21 31 chr2L 1711341 1711385 chr2L 1711685 1711729 mdg3 5 340 1.5 2.0 1.8 1.8 388 chr2L 1711341 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711535 3` UTR frtz - chr2L 1711729 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-21 32 chr2L 1879556 1879573 chr2L 1879713 1879731 5 158 4.5 4.5 4.5 0.9 175 chr2L 1879556 intron CG31663 - chr2L 1879644 intron CG31663 - chr2L 1879731 intron CG31663 - chr2L_5_1875001 chr2L_1875001 RAL-21 33 chr2L 2049201 2049238 chr2L 2049300 2049341 5 91 0.0 7.0 3.5 1.1 140 chr2L 2049201 intergenic not near genes chr2L 2049271 intergenic not near genes chr2L 2049341 intergenic not near genes chr2L_5_2045001 chr2L_2045001 RAL-21 34 chr2L 2068791 2068837 chr2L 2068994 2069026 9 197 0.5 2.0 1.2 4.1 235 chr2L 2068791 intron dpr3 - chr2L 2068908 intron dpr3 - chr2L 2069026 intron dpr3 - chr2L_9_2065001 chr2L_2065001 RAL-21 35 chr2L 2085685 2085726 chr2L 2086044 2086084 5 359 2.5 1.5 2.0 1.7 399 chr2L 2085685 intron dpr3 - chr2L 2085884 intron dpr3 - chr2L 2086084 intron dpr3 - chr2L_5_2085001 chr2L_2085001 RAL-21 36 chr2L 2100385 2100405 chr2L 2109543 2109566 roo 5 9159 2.0 2.0 2.0 1.7 9181 chr2L 2100385 intron dpr3 - chr2L 2104976 intron dpr3 - chr2L 2109566 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-21 37 chr2L 2250424 2250444 chr2L 2251211 2251220 5 781 3.5 0.5 2.0 1.7 796 chr2L 2250424 intergenic Ser12 - chr2L 2250822 exon Ser12 - chr2L 2251220 exon Ser12 - chr2L_5_2250001 chr2L_2250001 RAL-21 38 chr2L 2294042 2294068 chr2L 2299247 2299251 copia 4 5202 0.0 2.0 1.0 2.0 5209 chr2L 2294042 intergenic not near genes chr2L 2296646 intergenic not near genes chr2L 2299251 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-21 39 chr2L 2311053 2311092 chr2L 2311169 2311208 9 116 2.0 1.5 1.8 3.2 155 chr2L 2311053 intron CG9967 - chr2L 2311130 intron CG9967 - chr2L 2311208 intron CG9967 - chr2L_9_2310001 chr2L_2310001 RAL-21 40 chr2L 2317101 2317125 chr2L 2317292 2317316 6 191 21.0 19.0 20.0 0.3 215 chr2L 2317101 intron,intron CG9967 -,eys + chr2L 2317208 intron,intron CG9967 -,eys + chr2L 2317316 intron,intron CG9967 -,eys + chr2L_6_2315001 chr2L_2315001 RAL-21 41 chr2L 2348121 2348122 chr2L 2348204 2348217 4 90 2.0 2.5 2.2 1.2 96 chr2L 2348121 intron,intron CG9967 -,eys + chr2L 2348169 intron,intron CG9967 -,eys + chr2L 2348217 intron,intron CG9967 -,eys + chr2L_4_2345001 chr2L_2345001 RAL-21 42 chr2L 2392139 2392181 chr2L 2392269 2392311 14 128 3.0 2.5 2.8 3.7 172 chr2L 2392139 intron VGlut + chr2L 2392225 intron VGlut + chr2L 2392311 intron VGlut + chr2L_14_2390001 chr2L_2390001 RAL-21 43 chr2L 2496078 2496131 chr2L 2496190 2496232 11 106 0.0 1.0 0.5 7.3 154 chr2L 2496078 intron oaf + chr2L 2496155 intron oaf + chr2L 2496232 intron oaf + chr2L_11_2495001 chr2L_2495001 RAL-21 44 chr2L 2503704 2503742 chr2L 2504503 2504540 8 795 2.5 2.5 2.5 2.3 836 chr2L 2503704 intergenic not near genes chr2L 2504122 intergenic not near genes chr2L 2504540 intergenic not near genes chr2L_8_2500001 chr2L_2500001 RAL-21 45 chr2L 2565543 2565569 chr2L 2571635 2571660 297 7 6092 2.5 3.0 2.8 1.8 6117 chr2L 2565543 exon Cyp309a2 - chr2L 2568602 intron Cyp309a2 - chr2L 2571660 exon Cyp309a2 - chr2L_7_2565001 chr2L_2565001 RAL-21 46 chr2L 2698846 2698893 chr2L 2698953 2698998 6 105 1.0 2.5 1.8 2.1 152 chr2L 2698846 intron CG31690 + chr2L 2698922 intron CG31690 + chr2L 2698998 intron CG31690 + chr2L_6_2695001 chr2L_2695001 RAL-21 47 chr2L 2724384 2724437 chr2L 2724480 2724525 13 95 0.5 0.5 0.5 8.7 141 chr2L 2724384 intergenic not near genes chr2L 2724454 intergenic not near genes chr2L 2724525 intergenic not near genes chr2L_13_2720001 chr2L_2720001 RAL-21 48 chr2L 2800599 2800613 chr2L 2800702 2800716 4 103 1.5 0.0 0.8 2.2 117 chr2L 2800599 intergenic not near genes chr2L 2800658 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-21 49 chr2L 2937398 2937449 chr2L 2937495 2937546 14 96 0.5 1.0 0.8 7.8 148 chr2L 2937398 intron lilli + chr2L 2937472 intron lilli + chr2L 2937546 intron lilli + chr2L_14_2935001 chr2L_2935001 RAL-21 50 chr2L 2945020 2945030 chr2L 2945138 2945146 4 116 10.0 7.5 8.8 0.4 126 chr2L 2945020 intron lilli + chr2L 2945083 5` UTR lilli + chr2L 2945146 5` UTR lilli + chr2L_4_2945001 chr2L_2945001 RAL-21 51 chr2L 3026218 3026251 chr2L 3026854 3026904 11 645 26.0 18.0 22.0 0.5 686 chr2L 3026218 3` UTR CG3542 + chr2L 3026561 3` UTR CG3605 - chr2L 3026904 exon CG3605 - chr2L_11_3025001 chr2L_3025001 RAL-21 52 chr2L 3073013 3073055 chr2L 3078236 3078277 copia 11 5223 3.5 6.0 4.8 1.9 5264 chr2L 3073013 intron toc - chr2L 3075645 intron toc - chr2L 3078277 intron toc - chr2L_11_3075001 chr2L_3075001 RAL-21 53 chr2L 3108856 3108898 chr2L 3108951 3108994 9 96 2.5 1.5 2.0 3.0 138 chr2L 3108856 exon toc - chr2L 3108925 intron toc - chr2L 3108994 intron toc - chr2L_9_3105001 chr2L_3105001 RAL-21 54 chr2L 3113418 3113444 chr2L 3113510 3113533 5 104 0.0 1.0 0.5 3.3 115 chr2L 3113418 intron toc - chr2L 3113476 intron toc - chr2L 3113533 intron toc - chr2L_5_3110001 chr2L_3110001 RAL-21 55 chr2L 3115548 3115576 chr2L 3115644 3115672 6 95 3.5 0.0 1.8 2.1 124 chr2L 3115548 intron toc - chr2L 3115610 intron toc - chr2L 3115672 intron toc - chr2L_6_3115001 chr2L_3115001 RAL-21 56 chr2L 3134932 3134955 chr2L 3135029 3135044 7 96 3.0 1.5 2.2 2.2 112 chr2L 3134932 intron toc - chr2L 3134988 intron toc - chr2L 3135044 intron toc - chr2L_7_3130001 chr2L_3130001 RAL-21 57 chr2L 3192196 3192231 chr2L 3192327 3192362 6 130 1.0 6.5 3.8 1.2 166 chr2L 3192196 exon CG34393 - chr2L 3192279 intron CG34393 - chr2L 3192362 intron CG34393 - chr2L_6_3190001 chr2L_3190001 RAL-21 58 chr2L 3202721 3202771 chr2L 3210170 3210220 mdg1 15 7447 2.5 6.0 4.2 2.9 7499 chr2L 3202721 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210220 intergenic CR45336 + chr2L_15_3205001 chr2L_3205001 RAL-21 59 chr2L 3233619 3233654 chr2L 3233790 3233810 9 166 4.0 3.0 3.5 2.0 191 chr2L 3233619 intergenic not near genes chr2L 3233714 intergenic not near genes chr2L 3233810 intergenic not near genes chr2L_9_3230001 chr2L_3230001 RAL-21 60 chr2L 3251474 3251522 chr2L 3259059 3259107 springer 11 7585 5.0 2.5 3.8 2.3 7633 chr2L 3251474 intergenic not near genes chr2L 3255290 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_11_3255001 chr2L_3255001 RAL-21 61 chr2L 3312096 3312113 chr2L 3312207 3312212 9 117 0.0 0.0 0.0 9.0 116 chr2L 3312096 intron CG3277 + chr2L 3312154 intron CG3277 + chr2L 3312212 intron CG3277 + chr2L_9_3310001 chr2L_3310001 RAL-21 62 chr2L 3388579 3388625 chr2L 3388840 3388886 pogo 13 260 3.0 1.5 2.2 4.1 307 chr2L 3388579 intergenic CG42460 - chr2L 3388732 intergenic CG42460 - chr2L 3388886 intergenic CG42460 -,CR44791 + chr2L_13_3385001 chr2L_3385001 RAL-21 63 chr2L 3393766 3393816 chr2L 3393871 3393921 4 105 0.0 2.0 1.0 2.0 155 chr2L 3393766 intergenic not near genes chr2L 3393844 intergenic not near genes chr2L 3393921 intergenic not near genes chr2L_4_3390001 chr2L_3390001 RAL-21 64 chr2L 3486147 3486168 chr2L 3486245 3486267 9 98 3.0 2.0 2.5 2.6 120 chr2L 3486147 intron CG15414 - chr2L 3486207 intron CG15414 - chr2L 3486267 intron CG15414 - chr2L_9_3485001 chr2L_3485001 RAL-21 65 chr2L 3508361 3508376 chr2L 3508459 3508474 6 98 0.0 6.5 3.2 1.4 113 chr2L 3508361 intergenic CR45299 +,tim - chr2L 3508418 intergenic CR45299 +,tim - chr2L 3508474 intergenic CR45299 +,tim - chr2L_6_3505001 chr2L_3505001 RAL-21 66 chr2L 3523019 3523053 chr2L 3523149 3523186 6 132 1.0 2.0 1.5 2.4 167 chr2L 3523019 exon Sr-CIV - chr2L 3523102 intron Sr-CIV - chr2L 3523186 exon Sr-CIV - chr2L_6_3520001 chr2L_3520001 RAL-21 67 chr2L 3603607 3603646 chr2L 3603721 3603762 17 114 6.5 5.0 5.8 2.5 155 chr2L 3603607 intergenic not near genes chr2L 3603684 intergenic not near genes chr2L 3603762 intergenic odd - chr2L_17_3600001 chr2L_3600001 RAL-21 68 chr2L 3616570 3616592 chr2L 3616665 3616689 8 96 0.5 1.0 0.8 4.4 119 chr2L 3616570 5` UTR CR44310 + chr2L 3616630 5` UTR CR44310 + chr2L 3616689 5` UTR CR44310 + chr2L_8_3615001 chr2L_3615001 RAL-21 69 chr2L 3649769 3649803 chr2L 3654991 3655019 copia 7 5219 1.0 4.0 2.5 2.0 5250 chr2L 3649769 intron for - chr2L 3652394 intron for - chr2L 3655019 intron for - chr2L_7_3650001 chr2L_3650001 RAL-21 70 chr2L 3696105 3696109 chr2L 3696202 3696206 5 97 6.5 9.0 7.8 0.6 101 chr2L 3696105 intergenic CG16712 - chr2L 3696156 intergenic CG16712 - chr2L 3696206 intergenic CG16712 - chr2L_5_3695001 chr2L_3695001 RAL-21 71 chr2L 3753946 3753986 chr2L 3754043 3754083 11 96 3.0 4.5 3.8 2.3 137 chr2L 3753946 intergenic not near genes chr2L 3754014 intergenic not near genes chr2L 3754083 intergenic not near genes chr2L_11_3750001 chr2L_3750001 RAL-21 72 chr2L 3819015 3819059 chr2L 3819117 3819160 8 101 1.5 0.5 1.0 4.0 145 chr2L 3819015 intergenic CR44077 + chr2L 3819088 intergenic not near genes chr2L 3819160 intergenic not near genes chr2L_8_3815001 chr2L_3815001 RAL-21 73 chr2L 3906029 3906067 chr2L 3906182 3906222 11 158 1.0 1.0 1.0 5.5 193 chr2L 3906029 intron fred - chr2L 3906126 intron fred - chr2L 3906222 intron fred - chr2L_11_3905001 chr2L_3905001 RAL-21 74 chr2L 3921782 3921784 chr2L 3922232 3922274 9 463 10.5 23.0 16.8 0.5 492 chr2L 3921782 intron fred - chr2L 3922028 intron fred - chr2L 3922274 intron fred - chr2L_9_3920001 chr2L_3920001 RAL-21 75 chr2L 3943775 3943817 chr2L 3943886 3943928 10 111 4.5 3.0 3.8 2.1 153 chr2L 3943775 intron fred - chr2L 3943852 intron fred - chr2L 3943928 intron fred - chr2L_10_3940001 chr2L_3940001 RAL-21 76 chr2L 4037782 4037803 chr2L 4037889 4037910 5 107 2.5 4.5 3.5 1.1 128 chr2L 4037782 intron ed + chr2L 4037846 intron ed + chr2L 4037910 intron ed + chr2L_5_4035001 chr2L_4035001 RAL-21 77 chr2L 4066050 4066050 chr2L 4068864 4068895 Juan 4 2832 1.0 5.0 3.0 1.0 2845 chr2L 4066050 intron ed + chr2L 4067472 intron ed + chr2L 4068895 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-21 78 chr2L 4155598 4155601 chr2L 4155859 4155862 4 261 0.0 4.0 2.0 1.3 264 chr2L 4155598 intergenic not near genes chr2L 4155730 intergenic not near genes chr2L 4155862 intergenic not near genes chr2L_4_4155001 chr2L_4155001 RAL-21 79 chr2L 4155602 4155634 chr2L 4155857 4155895 7 259 0.0 4.0 2.0 2.3 293 chr2L 4155602 intergenic not near genes chr2L 4155748 intergenic not near genes chr2L 4155895 intergenic not near genes chr2L_7_4155001 chr2L_4155001 RAL-21 80 chr2L 4166368 4166409 chr2L 4166471 4166509 15 101 2.0 4.0 3.0 3.8 141 chr2L 4166368 intergenic Or24a - chr2L 4166438 intergenic Or24a - chr2L 4166509 intergenic Or24a - chr2L_15_4165001 chr2L_4165001 RAL-21 81 chr2L 4231747 4231769 chr2L 4232066 4232088 8 319 5.0 2.5 3.8 1.7 341 chr2L 4231747 intergenic not near genes chr2L 4231918 intergenic not near genes chr2L 4232088 intergenic not near genes chr2L_8_4230001 chr2L_4230001 RAL-21 82 chr2L 4345486 4345519 chr2L 4345571 4345615 5 95 7.5 2.0 4.8 0.9 129 chr2L 4345486 3` UTR Atet + chr2L 4345550 3` UTR Atet + chr2L 4345615 3` UTR Atet + chr2L_5_4345001 chr2L_4345001 RAL-21 83 chr2L 4571837 4571888 chr2L 4571942 4571992 13 102 4.0 1.5 2.8 3.4 155 chr2L 4571837 intron dp - chr2L 4571914 intron dp - chr2L 4571992 intron dp - chr2L_13_4570001 chr2L_4570001 RAL-21 84 chr2L 4601691 4601733 chr2L 4609152 4609194 mdg1 7 7459 2.0 1.5 1.8 2.5 7503 chr2L 4601691 intron dp - chr2L 4605442 intron dp - chr2L 4609194 intron dp - chr2L_7_4605001 chr2L_4605001 RAL-21 85 chr2L 4661826 4661853 chr2L 4669426 4669453 opus 6 7600 6.5 5.0 5.8 0.9 7627 chr2L 4661826 intergenic not near genes chr2L 4665640 intergenic not near genes chr2L 4669453 intergenic not near genes chr2L_6_4665001 chr2L_4665001 RAL-21 86 chr2L 4681275 4681320 chr2L 4681559 4681604 8 281 1.5 2.0 1.8 2.9 329 chr2L 4681275 intergenic not near genes chr2L 4681440 intergenic not near genes chr2L 4681604 intergenic not near genes chr2L_8_4680001 chr2L_4680001 RAL-21 87 chr2L 4793295 4793319 chr2L 4793610 4793633 6 313 1.5 3.0 2.2 1.9 338 chr2L 4793295 intron CG15630 - chr2L 4793464 intron CG15630 - chr2L 4793633 intron CG15630 - chr2L_6_4790001 chr2L_4790001 RAL-21 88 chr2L 4803862 4803912 chr2L 4803966 4804016 13 101 4.0 2.0 3.0 3.2 154 chr2L 4803862 intergenic not near genes chr2L 4803939 intergenic not near genes chr2L 4804016 intergenic not near genes chr2L_13_4800001 chr2L_4800001 RAL-21 89 chr2L 4819472 4819515 chr2L 4819615 4819643 7 141 4.0 2.0 3.0 1.8 171 chr2L 4819472 intergenic not near genes chr2L 4819558 intergenic not near genes chr2L 4819643 intergenic not near genes chr2L_7_4815001 chr2L_4815001 RAL-21 90 chr2L 4858460 4858485 chr2L 4858568 4858593 6 106 3.0 0.0 1.5 2.4 133 chr2L 4858460 intron pog + chr2L 4858526 intron pog + chr2L 4858593 intron pog + chr2L_6_4855001 chr2L_4855001 RAL-21 91 chr2L 4918145 4918192 chr2L 4923238 4923323 jockey 7 5104 3.0 0.0 1.5 2.8 5178 chr2L 4918145 intron hoe1 - chr2L 4920734 intron hoe1 - chr2L 4923323 intron hoe1 - chr2L_7_4920001 chr2L_4920001 RAL-21 92 chr2L 4925656 4925690 chr2L 4925755 4925789 4 99 3.0 0.5 1.8 1.4 133 chr2L 4925656 intron hoe1 - chr2L 4925722 intron hoe1 - chr2L 4925789 intron hoe1 - chr2L_4_4925001 chr2L_4925001 RAL-21 93 chr2L 4936922 4936965 chr2L 4937116 4937160 18 195 4.0 5.0 4.5 3.3 238 chr2L 4936922 intergenic hoe2 -,Sgs1 + chr2L 4937041 intergenic Sgs1 + chr2L 4937160 intergenic Sgs1 + chr2L_18_4935001 chr2L_4935001 RAL-21 94 chr2L 4953495 4953529 chr2L 4953756 4953790 pogo 8 260 2.5 4.5 3.5 1.8 295 chr2L 4953495 intergenic Jon25Bii - chr2L 4953642 intergenic not near genes chr2L 4953790 intergenic Jon25Bi - chr2L_8_4950001 chr2L_4950001 RAL-21 95 chr2L 4993200 4993218 chr2L 4993304 4993322 7 104 6.0 3.0 4.5 1.3 122 chr2L 4993200 intergenic Rtnl1 -,CG34126 + chr2L 4993261 intergenic Rtnl1 - chr2L 4993322 intergenic Rtnl1 - chr2L_7_4990001 chr2L_4990001 RAL-21 96 chr2L 4993220 4993244 chr2L 4993301 4993348 6 100 2.0 2.5 2.2 1.9 128 chr2L 4993220 intergenic Rtnl1 - chr2L 4993284 intergenic Rtnl1 - chr2L 4993348 intergenic Rtnl1 - chr2L_6_4990001 chr2L_4990001 RAL-21 97 chr2L 4996074 4996117 chr2L 4996171 4996214 14 97 3.0 3.0 3.0 3.5 140 chr2L 4996074 intron Rtnl1 - chr2L 4996144 intron Rtnl1 - chr2L 4996214 intron Rtnl1 - chr2L_14_4995001 chr2L_4995001 RAL-21 98 chr2L 5090565 5090599 chr2L 5090917 5090951 8 352 4.0 4.5 4.2 1.5 386 chr2L 5090565 intron pgant5 - chr2L 5090758 intron pgant5 - chr2L 5090951 intron pgant5 - chr2L_8_5090001 chr2L_5090001 RAL-21 99 chr2L 5117278 5117325 chr2L 5117380 5117427 17 100 3.0 2.5 2.8 4.5 149 chr2L 5117278 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117427 intron Msp300 + chr2L_17_5115001 chr2L_5115001 RAL-21 100 chr2L 5120963 5121002 chr2L 5121076 5121114 10 112 3.5 1.5 2.5 2.9 151 chr2L 5120963 intron Msp300 + chr2L 5121038 intron Msp300 + chr2L 5121114 intron Msp300 + chr2L_10_5120001 chr2L_5120001 RAL-21 101 chr2L 5207289 5207293 chr2L 5209324 5209328 4 2035 35.0 29.0 32.0 0.1 2039 chr2L 5207289 5` UTR Cyp28d2 + chr2L 5208308 exon Cyp28d2 + chr2L 5209328 3` UTR Cyp28d2 + chr2L_4_5205001 chr2L_5205001 RAL-21 102 chr2L 5207294 5207307 chr2L 5209316 5209328 6 2027 33.5 29.0 31.2 0.2 2034 chr2L 5207294 5` UTR Cyp28d2 + chr2L 5208311 exon Cyp28d2 + chr2L 5209328 3` UTR Cyp28d2 + chr2L_6_5205001 chr2L_5205001 RAL-21 103 chr2L 5207308 5207327 chr2L 5209308 5209362 11 2032 31.5 28.5 30.0 0.4 2054 chr2L 5207308 exon Cyp28d2 + chr2L 5208335 exon Cyp28d2 + chr2L 5209362 intergenic Cyp28d2 + chr2L_11_5205001 chr2L_5205001 RAL-21 104 chr2L 5206803 5206856 chr2L 5209728 5209781 36 2928 48.5 54.5 51.5 0.7 2978 chr2L 5206803 3` UTR Msp300 + chr2L 5208292 exon Cyp28d2 + chr2L 5209781 intergenic Cyp28d2 + chr2L_36_5205001 chr2L_5205001 RAL-21 105 chr2L 5276713 5276733 chr2L 5276805 5276837 4 101 1.0 4.5 2.8 1.1 124 chr2L 5276713 exon Bsg25D - chr2L 5276775 intron Bsg25D - chr2L 5276837 intron Bsg25D - chr2L_4_5275001 chr2L_5275001 RAL-21 106 chr2L 5342503 5342529 chr2L 5342601 5342616 11 97 0.0 4.5 2.2 3.4 113 chr2L 5342503 intergenic CG12512 - chr2L 5342560 intergenic CG12512 - chr2L 5342616 intergenic CG12512 - chr2L_11_5340001 chr2L_5340001 RAL-21 107 chr2L 5433827 5433871 chr2L 5433927 5433971 8 97 4.0 2.5 3.2 1.9 144 chr2L 5433827 3` UTR CR43715 - chr2L 5433899 3` UTR CR43715 - chr2L 5433971 3` UTR CR43715 - chr2L_8_5430001 chr2L_5430001 RAL-21 108 chr2L 5563671 5563718 chr2L 5563774 5563811 5 102 0.5 4.5 2.5 1.4 140 chr2L 5563671 intergenic GluRIIB + chr2L 5563741 intergenic GluRIIB + chr2L 5563811 intergenic GluRIIB + chr2L_5_5560001 chr2L_5560001 RAL-21 109 chr2L 5592395 5592399 chr2L 5592495 5592499 4 100 2.0 8.0 5.0 0.7 104 chr2L 5592395 intergenic not near genes chr2L 5592447 intergenic not near genes chr2L 5592499 intergenic not near genes chr2L_4_5590001 chr2L_5590001 RAL-21 110 chr2L 5611327 5611354 chr2L 5611433 5611460 7 106 3.0 3.5 3.2 1.7 133 chr2L 5611327 intron CG14010 - chr2L 5611394 intron CG14010 - chr2L 5611460 intron CG14010 - chr2L_7_5610001 chr2L_5610001 RAL-21 111 chr2L 5649295 5649328 chr2L 5649419 5649452 7 120 1.5 0.0 0.8 3.9 157 chr2L 5649295 intron CG31646 - chr2L 5649374 intron CG31646 - chr2L 5649452 intron CG31646 - chr2L_7_5645001 chr2L_5645001 RAL-21 112 chr2L 5695843 5695889 chr2L 5695955 5696001 17 109 4.5 2.0 3.2 4.0 158 chr2L 5695843 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696001 intergenic not near genes chr2L_17_5695001 chr2L_5695001 RAL-21 113 chr2L 5827705 5827731 chr2L 5836733 5836759 roo 7 9026 6.5 3.5 5.0 1.2 9054 chr2L 5827705 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836759 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-21 114 chr2L 5900295 5900310 chr2L 5900387 5900401 4 96 1.0 5.0 3.0 1.0 106 chr2L 5900295 3` UTR CR44579 - chr2L 5900348 3` UTR CR44579 - chr2L 5900401 intergenic CR44579 - chr2L_4_5900001 chr2L_5900001 RAL-21 115 chr2L 5926246 5926351 chr2L 5926346 5926526 5 128 0.0 0.0 0.0 5.0 280 chr2L 5926246 intron dsf + chr2L 5926386 intron dsf + chr2L 5926526 intron dsf + chr2L_5_5925001 chr2L_5925001 RAL-21 116 chr2L 5982113 5982161 chr2L 5982212 5982233 6 90 2.5 1.0 1.8 2.1 120 chr2L 5982113 intron eIF-4a + chr2L 5982173 intron eIF-4a + chr2L 5982233 intron eIF-4a + chr2L_6_5980001 chr2L_5980001 RAL-21 117 chr2L 6002419 6002463 chr2L 6002525 6002569 20 106 2.5 2.5 2.5 5.7 150 chr2L 6002419 3` UTR Tsp26A + chr2L 6002494 3` UTR Tsp26A + chr2L 6002569 3` UTR Tsp26A + chr2L_20_6000001 chr2L_6000001 RAL-21 118 chr2L 6037014 6037063 chr2L 6037112 6037159 26 96 4.0 4.0 4.0 5.2 145 chr2L 6037014 5` UTR,3` UTR mtm -,CG9117 - chr2L 6037086 3` UTR CG9117 - chr2L 6037159 exon CG9117 - chr2L_26_6035001 chr2L_6035001 RAL-21 119 chr2L 6050426 6050463 chr2L 6050550 6050587 12 123 4.0 2.0 3.0 3.0 161 chr2L 6050426 3` UTR CG12393 + chr2L 6050506 intergenic CG12393 +,CG9135 + chr2L 6050587 intergenic CG12393 +,CG9135 + chr2L_12_6050001 chr2L_6050001 RAL-21 120 chr2L 6136537 6136580 chr2L 6136654 6136697 4 117 1.0 3.5 2.2 1.2 160 chr2L 6136537 intergenic not near genes chr2L 6136617 intergenic not near genes chr2L 6136697 intergenic not near genes chr2L_4_6135001 chr2L_6135001 RAL-21 121 chr2L 6185439 6185470 chr2L 6185526 6185562 7 92 1.5 3.0 2.2 2.2 123 chr2L 6185439 intron CG34380 + chr2L 6185500 intron CG34380 + chr2L 6185562 intron CG34380 + chr2L_7_6185001 chr2L_6185001 RAL-21 122 chr2L 6241589 6241615 chr2L 6241764 6241790 4 174 0.0 1.0 0.5 2.7 201 chr2L 6241589 intergenic not near genes chr2L 6241690 intergenic not near genes chr2L 6241790 intergenic not near genes chr2L_4_6240001 chr2L_6240001 RAL-21 123 chr2L 6282497 6282538 chr2L 6283201 6283240 4 698 7.0 18.5 12.8 0.3 743 chr2L 6282497 intron Ddr + chr2L 6282868 intron Ddr + chr2L 6283240 intron Ddr + chr2L_4_6280001 chr2L_6280001 RAL-21 124 chr2L 6281684 6281732 chr2L 6283604 6283652 6 1922 18.0 19.0 18.5 0.3 1968 chr2L 6281684 intron Ddr + chr2L 6282668 intron Ddr + chr2L 6283652 intron Ddr + chr2L_6_6280001 chr2L_6280001 RAL-21 125 chr2L 6349058 6349073 chr2L 6349156 6349171 5 98 4.5 3.0 3.8 1.0 113 chr2L 6349058 intergenic CG9498 - chr2L 6349114 intergenic CG9498 - chr2L 6349171 intergenic CG9498 - chr2L_5_6345001 chr2L_6345001 RAL-21 126 chr2L 6363139 6363170 chr2L 6366085 6366105 Burdock 4 2943 5.5 2.0 3.8 0.8 2966 chr2L 6363139 intergenic not near genes chr2L 6364622 intergenic not near genes chr2L 6366105 intergenic not near genes chr2L_4_6360001 chr2L_6360001 RAL-21 127 chr2L 6426837 6426873 chr2L 6445117 6445153 roo 9 18279 9.0 2.0 5.5 1.4 18316 chr2L 6426837 3` UTR CG9527 - chr2L 6435995 intron CG9527 - chr2L 6445153 exon CG9527 - chr2L_9_6435001 chr2L_6435001 RAL-21 128 chr2L 6590078 6590120 chr2L 6590175 6590201 8 93 4.0 4.5 4.2 1.5 123 chr2L 6590078 intron CG11319 - chr2L 6590140 intron CG11319 - chr2L 6590201 intron CG11319 - chr2L_8_6590001 chr2L_6590001 RAL-21 129 chr2L 6626869 6626917 chr2L 6626974 6627022 10 100 4.5 4.0 4.2 1.9 153 chr2L 6626869 intron Oatp26F - chr2L 6626946 intron Oatp26F - chr2L 6627022 intron Oatp26F - chr2L_10_6625001 chr2L_6625001 RAL-21 130 chr2L 6671156 6671200 chr2L 6671261 6671306 10 106 5.0 3.5 4.2 1.9 150 chr2L 6671156 intron,intron,3` UTR CG34310 +,cup +,Spn27A - chr2L 6671231 intron,intron,3` UTR CG34310 +,cup +,Spn27A - chr2L 6671306 intron,intron,3` UTR CG34310 +,cup +,Spn27A - chr2L_10_6670001 chr2L_6670001 RAL-21 131 chr2L 6799519 6799567 chr2L 6799627 6799675 15 106 2.0 3.5 2.8 3.9 156 chr2L 6799519 5` UTR CR43610 + chr2L 6799597 5` UTR CR43610 + chr2L 6799675 intergenic CR43610 +,CG17376 - chr2L_15_6795001 chr2L_6795001 RAL-21 132 chr2L 6850361 6850413 chr2L 6850464 6850516 13 103 4.0 1.0 2.5 3.7 155 chr2L 6850361 intergenic not near genes chr2L 6850438 intergenic not near genes chr2L 6850516 intergenic not near genes chr2L_13_6850001 chr2L_6850001 RAL-21 133 chr2L 6991419 6991436 chr2L 6998558 6998575 HMS-Beagle 5 7136 4.0 2.0 3.0 1.2 7156 chr2L 6991419 intron uif - chr2L 6994997 intron uif - chr2L 6998575 intron uif - chr2L_5_6990001 chr2L_6990001 RAL-21 134 chr2L 7100975 7101013 chr2L 7101221 7101234 9 240 1.5 2.0 1.8 3.2 259 chr2L 7100975 intron Pvf3 - chr2L 7101104 intron Pvf3 - chr2L 7101234 intron Pvf3 - chr2L_9_7100001 chr2L_7100001 RAL-21 135 chr2L 7126841 7126878 chr2L 7126940 7126977 10 99 4.0 0.0 2.0 3.3 136 chr2L 7126841 intron Pvf3 - chr2L 7126909 intron Pvf3 - chr2L 7126977 intron Pvf3 - chr2L_10_7125001 chr2L_7125001 RAL-21 136 chr2L 7151831 7151852 chr2L 7152146 7152167 7 314 1.5 5.0 3.2 1.7 336 chr2L 7151831 intron Pvf3 - chr2L 7151999 intron Pvf3 - chr2L 7152167 intron Pvf3 - chr2L_7_7150001 chr2L_7150001 RAL-21 137 chr2L 7249600 7249652 chr2L 7249703 7249703 5 85 0.0 1.0 0.5 3.3 103 chr2L 7249600 intergenic Ndae1 - chr2L 7249652 intergenic Ndae1 - chr2L 7249703 intergenic Ndae1 - chr2L_5_7245001 chr2L_7245001 RAL-21 138 chr2L 7254518 7254531 chr2L 7254616 7254629 5 98 0.0 4.5 2.2 1.6 111 chr2L 7254518 intergenic not near genes chr2L 7254574 intergenic not near genes chr2L 7254629 intergenic not near genes chr2L_5_7250001 chr2L_7250001 RAL-21 139 chr2L 7254538 7254547 chr2L 7254610 7254645 4 92 0.0 3.5 1.8 1.4 107 chr2L 7254538 intergenic not near genes chr2L 7254592 intergenic not near genes chr2L 7254645 intergenic not near genes chr2L_4_7250001 chr2L_7250001 RAL-21 140 chr2L 7331943 7331979 chr2L 7332073 7332109 9 130 0.0 4.0 2.0 3.0 166 chr2L 7331943 intergenic not near genes chr2L 7332026 intergenic not near genes chr2L 7332109 intergenic not near genes chr2L_9_7330001 chr2L_7330001 RAL-21 141 chr2L 7343112 7343160 chr2L 7343223 7343249 6 107 1.5 1.5 1.5 2.4 137 chr2L 7343112 intron Wnt6 + chr2L 7343180 intron Wnt6 + chr2L 7343249 intron Wnt6 + chr2L_6_7340001 chr2L_7340001 RAL-21 142 chr2L 7343309 7343353 chr2L 7350445 7350488 roo 4 7132 2.5 0.5 1.5 1.6 7179 chr2L 7343309 intron Wnt6 + chr2L 7346898 intron Wnt6 + chr2L 7350488 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-21 143 chr2L 7405760 7405786 chr2L 7405860 7405863 5 95 4.0 0.0 2.0 1.7 103 chr2L 7405760 exon CG5177 + chr2L 7405812 intron CG5177 + chr2L 7405863 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-21 144 chr2L 7489589 7489598 chr2L 7489715 7489724 4 126 2.5 0.0 1.2 1.8 135 chr2L 7489589 intron Ziz - chr2L 7489656 intron Ziz - chr2L 7489724 intron Ziz - chr2L_4_7485001 chr2L_7485001 RAL-21 145 chr2L 7555197 7555234 chr2L 7555294 7555328 9 92 0.0 2.5 1.2 4.1 131 chr2L 7555197 intron RapGAP1 - chr2L 7555262 intron RapGAP1 - chr2L 7555328 intron RapGAP1 - chr2L_9_7555001 chr2L_7555001 RAL-21 146 chr2L 7562163 7562193 chr2L 7562263 7562293 13 99 3.0 3.5 3.2 3.1 130 chr2L 7562163 intron RapGAP1 - chr2L 7562228 intron RapGAP1 - chr2L 7562293 intron RapGAP1 - chr2L_13_7560001 chr2L_7560001 RAL-21 147 chr2L 7564549 7564599 chr2L 7564732 7564751 9 179 1.5 0.0 0.8 5.0 202 chr2L 7564549 intron RapGAP1 - chr2L 7564650 intron RapGAP1 - chr2L 7564751 intron RapGAP1 - chr2L_9_7560001 chr2L_7560001 RAL-21 148 chr2L 7715489 7715521 chr2L 7715650 7715682 7 161 23.0 20.0 21.5 0.3 193 chr2L 7715489 exon CG33296 - chr2L 7715586 exon CG33296 - chr2L 7715682 intron CG33296 - chr2L_7_7715001 chr2L_7715001 RAL-21 149 chr2L 7759240 7759251 chr2L 7759338 7759352 4 100 3.0 3.5 3.2 1.0 112 chr2L 7759240 intron CG7196 + chr2L 7759296 intron CG7196 + chr2L 7759352 intron CG7196 + chr2L_4_7755001 chr2L_7755001 RAL-21 150 chr2L 7759254 7759255 chr2L 7759324 7759356 5 95 1.5 2.5 2.0 1.7 102 chr2L 7759254 intron CG7196 + chr2L 7759305 intron CG7196 + chr2L 7759356 intron CG7196 + chr2L_5_7755001 chr2L_7755001 RAL-21 151 chr2L 7779405 7779414 chr2L 7779549 7779557 6 143 0.0 2.0 1.0 3.0 152 chr2L 7779405 intergenic not near genes chr2L 7779481 intergenic not near genes chr2L 7779557 intergenic not near genes chr2L_6_7775001 chr2L_7775001 RAL-21 152 chr2L 7854231 7854281 chr2L 7854328 7854378 9 96 2.0 2.5 2.2 2.8 147 chr2L 7854231 intron CG14535 - chr2L 7854304 intron CG14535 - chr2L 7854378 intron CG14535 - chr2L_9_7850001 chr2L_7850001 RAL-21 153 chr2L 7867549 7867593 chr2L 7867663 7867707 15 112 5.5 4.0 4.8 2.6 158 chr2L 7867549 intron Proc - chr2L 7867628 intron Proc - chr2L 7867707 intron Proc - chr2L_15_7865001 chr2L_7865001 RAL-21 154 chr2L 7959028 7959070 chr2L 7960459 7960501 pogo 14 1427 4.5 4.0 4.2 2.7 1473 chr2L 7959028 intron Snoo - chr2L 7959764 intron Snoo - chr2L 7960501 intron Snoo - chr2L_14_7955001 chr2L_7955001 RAL-21 155 chr2L 7977070 7977110 chr2L 7984066 7984099 297 6 6995 0.5 0.5 0.5 4.0 7029 chr2L 7977070 intron Snoo - chr2L 7980584 intron Snoo - chr2L 7984099 intron,5` UTR Snoo -,CG7231 + chr2L_6_7980001 chr2L_7980001 RAL-21 156 chr2L 7984944 7984959 chr2L 7985085 7985105 6 146 2.5 3.5 3.0 1.5 161 chr2L 7984944 intron CG7231 + chr2L 7985024 intron CG7231 + chr2L 7985105 intron CG7231 + chr2L_6_7985001 chr2L_7985001 RAL-21 157 chr2L 7997013 7997052 chr2L 7997133 7997172 13 119 5.0 3.0 4.0 2.6 159 chr2L 7997013 intron CG7227 - chr2L 7997092 intron CG7227 - chr2L 7997172 intron CG7227 - chr2L_13_7995001 chr2L_7995001 RAL-21 158 chr2L 7999747 7999774 chr2L 7999844 7999871 8 97 2.0 3.5 2.8 2.1 124 chr2L 7999747 intron Wwox - chr2L 7999809 3` UTR Wwox - chr2L 7999871 exon Wwox - chr2L_8_7995001 chr2L_7995001 RAL-21 159 chr2L 8003034 8003062 chr2L 8003134 8003164 11 101 3.0 8.5 5.8 1.6 130 chr2L 8003034 intron Wwox - chr2L 8003099 intron Wwox - chr2L 8003164 intron Wwox - chr2L_11_8000001 chr2L_8000001 RAL-21 160 chr2L 8013599 8013640 chr2L 8018816 8018837 copia 7 5218 5.5 0.0 2.8 1.8 5238 chr2L 8013599 intron Tg + chr2L 8016218 intron Tg + chr2L 8018837 intron Tg + chr2L_7_8015001 chr2L_8015001 RAL-21 161 chr2L 8018815 8018837 chr2L 8023619 8023641 Doc 11 4804 0.0 6.0 3.0 2.8 4826 chr2L 8018815 intron Tg + chr2L 8021228 intron Tg + chr2L 8023641 intron Tg + chr2L_11_8020001 chr2L_8020001 RAL-21 162 chr2L 8164561 8164615 chr2L 8164663 8164674 11 96 2.5 5.0 3.8 2.3 113 chr2L 8164561 intron Piezo + chr2L 8164618 intron Piezo + chr2L 8164674 intron Piezo + chr2L_11_8160001 chr2L_8160001 RAL-21 163 chr2L 8171276 8171301 chr2L 8171377 8171397 10 100 0.0 7.0 3.5 2.2 121 chr2L 8171276 intron Piezo + chr2L 8171336 intron Piezo + chr2L 8171397 intron Piezo + chr2L_10_8170001 chr2L_8170001 RAL-21 164 chr2L 8185492 8185516 chr2L 8185601 8185625 4 109 0.0 5.5 2.8 1.1 133 chr2L 8185492 intron Piezo + chr2L 8185558 intron Piezo + chr2L 8185625 intron Piezo + chr2L_4_8185001 chr2L_8185001 RAL-21 165 chr2L 8286275 8286301 chr2L 8286382 8286402 4 106 6.0 4.5 5.2 0.6 127 chr2L 8286275 intron Btk29A - chr2L 8286338 intron Btk29A - chr2L 8286402 intron Btk29A - chr2L_4_8285001 chr2L_8285001 RAL-21 166 chr2L 8336919 8336961 chr2L 8337018 8337060 7 97 0.5 1.5 1.0 3.5 141 chr2L 8336919 intergenic not near genes chr2L 8336990 intergenic not near genes chr2L 8337060 intergenic not near genes chr2L_7_8335001 chr2L_8335001 RAL-21 167 chr2L 8452400 8452447 chr2L 8461591 8461638 roo 13 9189 4.5 9.5 7.0 1.6 9238 chr2L 8452400 intron fu12 - chr2L 8457019 intron fu12 - chr2L 8461638 intron fu12 - chr2L_13_8455001 chr2L_8455001 RAL-21 168 chr2L 8502642 8502678 chr2L 8502745 8502781 6 104 3.0 2.5 2.8 1.6 139 chr2L 8502642 intron Dh31 - chr2L 8502712 intron Dh31 - chr2L 8502781 intron Dh31 - chr2L_6_8500001 chr2L_8500001 RAL-21 169 chr2L 8578538 8578586 chr2L 8578652 8578700 6 114 1.0 1.5 1.2 2.7 162 chr2L 8578538 intron Sema-1a + chr2L 8578619 intron Sema-1a + chr2L 8578700 intron Sema-1a + chr2L_6_8575001 chr2L_8575001 RAL-21 170 chr2L 8594449 8594487 chr2L 8601523 8601561 297 6 7068 2.5 0.0 1.2 2.7 7112 chr2L 8594449 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598005 intron Sema-1a + chr2L 8601561 intron Sema-1a + chr2L_6_8595001 chr2L_8595001 RAL-21 171 chr2L 8625486 8625528 chr2L 8625627 8625673 4 142 2.0 1.0 1.5 1.6 187 chr2L 8625486 intron Sema-1a + chr2L 8625580 intron Sema-1a + chr2L 8625673 intron Sema-1a + chr2L_4_8625001 chr2L_8625001 RAL-21 172 chr2L 8634502 8634549 chr2L 8634606 8634653 12 98 2.0 3.0 2.5 3.4 151 chr2L 8634502 intron Sema-1a + chr2L 8634578 intron Sema-1a + chr2L 8634653 intron Sema-1a + chr2L_12_8630001 chr2L_8630001 RAL-21 173 chr2L 8723095 8723133 chr2L 8731492 8731530 Tirant 15 8395 2.5 3.5 3.0 3.8 8435 chr2L 8723095 intron raw - chr2L 8727312 intron raw - chr2L 8731530 intron raw - chr2L_15_8725001 chr2L_8725001 RAL-21 174 chr2L 8749583 8749627 chr2L 8749804 8749848 9 225 4.0 4.5 4.2 1.7 265 chr2L 8749583 intergenic not near genes chr2L 8749716 intergenic not near genes chr2L 8749848 intergenic not near genes chr2L_9_8745001 chr2L_8745001 RAL-21 175 chr2L 8750769 8750779 chr2L 8750880 8750890 4 110 0.0 14.0 7.0 0.5 121 chr2L 8750769 intergenic not near genes chr2L 8750830 intergenic not near genes chr2L 8750890 intergenic not near genes chr2L_4_8750001 chr2L_8750001 RAL-21 176 chr2L 8876600 8876643 chr2L 8876742 8876785 16 143 31.5 24.0 27.8 0.6 185 chr2L 8876600 intergenic not near genes chr2L 8876692 intergenic not near genes chr2L 8876785 intergenic not near genes chr2L_16_8875001 chr2L_8875001 RAL-21 177 chr2L 8886664 8886708 chr2L 8886771 8886804 8 103 1.0 2.5 1.8 2.9 140 chr2L 8886664 intergenic CR44415 - chr2L 8886734 intergenic CR44415 - chr2L 8886804 intergenic CR44415 - chr2L_8_8885001 chr2L_8885001 RAL-21 178 chr2L 8891896 8891903 chr2L 8891995 8892002 4 99 0.0 7.5 3.8 0.8 106 chr2L 8891896 3` UTR CG42713 + chr2L 8891949 3` UTR CG42713 + chr2L 8892002 3` UTR CG42713 + chr2L_4_8890001 chr2L_8890001 RAL-21 179 chr2L 8939645 8939694 chr2L 8939745 8939794 8 100 3.5 1.5 2.5 2.3 149 chr2L 8939645 3` UTR Tsp29Fb + chr2L 8939720 3` UTR Tsp29Fb + chr2L 8939794 3` UTR CG9510 - chr2L_8_8935001 chr2L_8935001 RAL-21 180 chr2L 8992446 8992480 chr2L 8992534 8992578 7 95 0.0 3.0 1.5 2.8 132 chr2L 8992446 intron CG9555 + chr2L 8992512 intron CG9555 + chr2L 8992578 intron CG9555 + chr2L_7_8990001 chr2L_8990001 RAL-21 181 chr2L 9000263 9000307 chr2L 9007793 9007837 roo 9 7529 2.0 3.5 2.8 2.4 7574 chr2L 9000263 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007837 intergenic not near genes chr2L_9_9000001 chr2L_9000001 RAL-21 182 chr2L 9040864 9040911 chr2L 9040960 9040961 9 87 2.0 2.0 2.0 3.0 97 chr2L 9040864 intergenic not near genes chr2L 9040912 intergenic not near genes chr2L 9040961 intergenic not near genes chr2L_9_9040001 chr2L_9040001 RAL-21 183 chr2L 9042583 9042588 chr2L 9042697 9042702 6 114 0.0 9.0 4.5 1.1 119 chr2L 9042583 intergenic not near genes chr2L 9042642 intergenic not near genes chr2L 9042702 intergenic not near genes chr2L_6_9040001 chr2L_9040001 RAL-21 184 chr2L 9053398 9053428 chr2L 9053642 9053683 4 252 1.5 0.0 0.8 2.2 285 chr2L 9053398 exon CG31708 - chr2L 9053540 intron CG31708 - chr2L 9053683 intron CG31708 - chr2L_4_9050001 chr2L_9050001 RAL-21 185 chr2L 9068302 9068340 chr2L 9069135 9069165 9 825 23.5 29.0 26.2 0.3 863 chr2L 9068302 intron CG31708 - chr2L 9068734 intron CG31708 - chr2L 9069165 intron CG31708 - chr2L_9_9065001 chr2L_9065001 RAL-21 186 chr2L 9093939 9093986 chr2L 9094042 9094090 8 102 3.5 3.5 3.5 1.8 151 chr2L 9093939 intergenic not near genes chr2L 9094014 intergenic not near genes chr2L 9094090 intergenic not near genes chr2L_8_9090001 chr2L_9090001 RAL-21 187 chr2L 9116584 9116622 chr2L 9116713 9116751 7 128 4.0 2.0 3.0 1.8 167 chr2L 9116584 intergenic not near genes chr2L 9116668 intergenic not near genes chr2L 9116751 intergenic not near genes chr2L_7_9115001 chr2L_9115001 RAL-21 188 chr2L 9158780 9158795 chr2L 9158897 9158912 8 117 9.0 0.0 4.5 1.5 132 chr2L 9158780 intron CG32982 + chr2L 9158846 intron CG32982 + chr2L 9158912 intron CG32982 + chr2L_8_9155001 chr2L_9155001 RAL-21 189 chr2L 9227209 9227250 chr2L 9227312 9227353 5 99 2.5 2.5 2.5 1.4 144 chr2L 9227209 intron tai + chr2L 9227281 intron tai + chr2L 9227353 intron tai + chr2L_5_9225001 chr2L_9225001 RAL-21 190 chr2L 9264332 9264378 chr2L 9264452 9264498 18 120 3.0 4.0 3.5 4.0 166 chr2L 9264332 intron Ggamma30A + chr2L 9264415 intron Ggamma30A + chr2L 9264498 intron Ggamma30A + chr2L_18_9260001 chr2L_9260001 RAL-21 191 chr2L 9364279 9364286 chr2L 9364398 9364405 6 118 0.0 0.0 0.0 6.0 126 chr2L 9364279 intergenic CR43404 + chr2L 9364342 5` UTR CR43404 + chr2L 9364405 intron CR43404 + chr2L_6_9360001 chr2L_9360001 RAL-21 192 chr2L 9378010 9378037 chr2L 9378265 9378305 6 258 13.5 19.5 16.5 0.3 295 chr2L 9378010 intron Shawl - chr2L 9378158 intron Shawl - chr2L 9378305 intron Shawl - chr2L_6_9375001 chr2L_9375001 RAL-21 193 chr2L 9387229 9387273 chr2L 9387347 9387390 10 118 4.0 2.0 3.0 2.5 161 chr2L 9387229 intron Shawl - chr2L 9387310 intron Shawl - chr2L 9387390 intron,5` UTR Shawl -,Aldh + chr2L_10_9385001 chr2L_9385001 RAL-21 194 chr2L 9393476 9393526 chr2L 9396463 9396487 jockey 13 2984 3.5 3.0 3.2 3.1 3011 chr2L 9393476 intron Shawl - chr2L 9394982 intron Shawl - chr2L 9396487 intron Shawl - chr2L_13_9390001 chr2L_9390001 RAL-21 195 chr2L 9451031 9451068 chr2L 9451154 9451182 5 119 0.0 4.0 2.0 1.7 151 chr2L 9451031 intron numb + chr2L 9451106 intron numb + chr2L 9451182 intron numb + chr2L_5_9450001 chr2L_9450001 RAL-21 196 chr2L 9474771 9474806 chr2L 9474885 9474920 10 114 3.0 3.5 3.2 2.4 149 chr2L 9474771 intergenic not near genes chr2L 9474846 intergenic not near genes chr2L 9474920 intergenic not near genes chr2L_10_9470001 chr2L_9470001 RAL-21 197 chr2L 9547401 9547435 chr2L 9547497 9547537 11 99 6.5 6.5 6.5 1.5 136 chr2L 9547401 3` UTR CG13114 + chr2L 9547469 intergenic CG13114 +,jp - chr2L 9547537 intergenic CG13114 +,jp - chr2L_11_9545001 chr2L_9545001 RAL-21 198 chr2L 9593371 9593391 chr2L 9593449 9593484 4 90 3.0 5.5 4.2 0.8 113 chr2L 9593371 intergenic not near genes chr2L 9593428 intergenic not near genes chr2L 9593484 intergenic not near genes chr2L_4_9590001 chr2L_9590001 RAL-21 199 chr2L 9686815 9686828 chr2L 9687062 9687077 8 258 6.0 2.5 4.2 1.5 262 chr2L 9686815 intron Pka-C1 - chr2L 9686946 intron Pka-C1 - chr2L 9687077 intron Pka-C1 - chr2L_8_9685001 chr2L_9685001 RAL-21 200 chr2L 9770754 9770800 chr2L 9770871 9770912 1360 8 116 4.0 1.5 2.8 2.1 158 chr2L 9770754 intron ppk18 - chr2L 9770833 intron ppk18 - chr2L 9770912 exon ppk18 - chr2L_8_9770001 chr2L_9770001 RAL-21 201 chr2L 9775968 9776010 chr2L 9776070 9776112 15 102 4.0 2.5 3.2 3.6 144 chr2L 9775968 intergenic not near genes chr2L 9776040 intergenic not near genes chr2L 9776112 intergenic not near genes chr2L_15_9775001 chr2L_9775001 RAL-21 202 chr2L 9819735 9819764 chr2L 9819839 9819868 6 104 4.0 1.0 2.5 1.7 133 chr2L 9819735 intron nAChRalpha6 - chr2L 9819802 intron nAChRalpha6 - chr2L 9819868 intron nAChRalpha6 - chr2L_6_9815001 chr2L_9815001 RAL-21 203 chr2L 9828253 9828275 chr2L 9828353 9828375 4 100 2.5 7.0 4.8 0.7 122 chr2L 9828253 intron nAChRalpha6 - chr2L 9828314 intron nAChRalpha6 - chr2L 9828375 intron nAChRalpha6 - chr2L_4_9825001 chr2L_9825001 RAL-21 204 chr2L 9829564 9829602 chr2L 9829786 9829822 4 221 1.5 1.5 1.5 1.6 258 chr2L 9829564 intron nAChRalpha6 - chr2L 9829693 intron nAChRalpha6 - chr2L 9829822 intron nAChRalpha6 - chr2L_4_9825001 chr2L_9825001 RAL-21 205 chr2L 9871530 9871564 chr2L 9871639 9871673 7 109 1.5 3.0 2.2 2.2 143 chr2L 9871530 intron nAChRalpha6 - chr2L 9871602 intron nAChRalpha6 - chr2L 9871673 intron nAChRalpha6 - chr2L_7_9870001 chr2L_9870001 RAL-21 206 chr2L 9892489 9892532 chr2L 9892585 9892628 6 96 2.0 2.5 2.2 1.9 139 chr2L 9892489 intron mtDNA-helicase - chr2L 9892558 intron mtDNA-helicase - chr2L 9892628 intron mtDNA-helicase - chr2L_6_9890001 chr2L_9890001 RAL-21 207 chr2L 9973725 9973758 chr2L 9980846 9980896 HMS-Beagle 11 7124 4.0 3.5 3.8 2.3 7171 chr2L 9973725 intergenic not near genes chr2L 9977310 intergenic not near genes chr2L 9980896 intergenic not near genes chr2L_11_9975001 chr2L_9975001 RAL-21 208 chr2L 10051732 10051747 chr2L 10051812 10051852 4 94 4.0 5.0 4.5 0.7 120 chr2L 10051732 5` UTR CR44874 + chr2L 10051792 5` UTR CR44874 + chr2L 10051852 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-21 209 chr2L 10105285 10105311 chr2L 10105356 10105407 7 88 3.5 4.5 4.0 1.4 122 chr2L 10105285 intron,intron CG44153 -,CG34109 + chr2L 10105346 intron,intron CG44153 -,CG34109 + chr2L 10105407 intron,intron CG44153 -,CG34109 + chr2L_7_10105001 chr2L_10105001 RAL-21 210 chr2L 10122037 10122063 chr2L 10122207 10122225 5 167 3.0 4.0 3.5 1.1 188 chr2L 10122037 intron,exon CG44153 -,CG34109 + chr2L 10122131 intron,intron,3` UTR CG44153 -,CG34109 +,CG13135 - chr2L 10122225 intron,intron,3` UTR CG44153 -,CG34109 +,CG13135 - chr2L_5_10120001 chr2L_10120001 RAL-21 211 chr2L 10167802 10167852 chr2L 10169132 10169183 9 1326 9.0 11.0 10.0 0.8 1381 chr2L 10167802 intron CG44153 - chr2L 10168492 intron CG44153 - chr2L 10169183 intron CG44153 - chr2L_9_10165001 chr2L_10165001 RAL-21 212 chr2L 10209832 10209850 chr2L 10209929 10209947 5 94 2.5 0.0 1.2 2.3 115 chr2L 10209832 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209890 3` UTR CG5727 - chr2L 10209947 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 RAL-21 213 chr2L 10258413 10258438 chr2L 10258518 10258528 10 103 1.5 6.5 4.0 2.0 115 chr2L 10258413 intron Pten - chr2L 10258470 intron Pten - chr2L 10258528 intron Pten - chr2L_10_10255001 chr2L_10255001 RAL-21 214 chr2L 10281655 10281686 chr2L 10281770 10281812 6 122 0.0 4.0 2.0 2.0 157 chr2L 10281655 intergenic CG5604 - chr2L 10281734 intergenic CG5604 - chr2L 10281812 intergenic CG5604 - chr2L_6_10280001 chr2L_10280001 RAL-21 215 chr2L 10294665 10294683 chr2L 10294761 10294773 7 101 2.0 4.0 3.0 1.8 108 chr2L 10294665 intron Hand - chr2L 10294719 intron Hand - chr2L 10294773 intron Hand - chr2L_7_10290001 chr2L_10290001 RAL-21 216 chr2L 10458088 10458100 chr2L 10458369 10458381 5 281 4.5 0.5 2.5 1.4 293 chr2L 10458088 intron LM408 + chr2L 10458234 intron LM408 + chr2L 10458381 intron LM408 + chr2L_5_10455001 chr2L_10455001 RAL-21 217 chr2L 10490261 10490293 chr2L 10490357 10490395 9 101 5.5 2.0 3.8 1.9 134 chr2L 10490261 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490328 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490395 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_9_10490001 chr2L_10490001 RAL-21 218 chr2L 10515340 10515390 chr2L 10515453 10515503 20 112 3.0 5.0 4.0 4.0 163 chr2L 10515340 intron,intron CG45083 -,Fatp - chr2L 10515422 intron,intron CG45083 -,Fatp - chr2L 10515503 intron,intron CG45083 -,Fatp - chr2L_20_10515001 chr2L_10515001 RAL-21 219 chr2L 10580782 10580824 chr2L 10580883 10580925 9 97 2.0 6.0 4.0 1.8 143 chr2L 10580782 intron Trim9 + chr2L 10580854 intron Trim9 + chr2L 10580925 intron Trim9 + chr2L_9_10580001 chr2L_10580001 RAL-21 220 chr2L 10586489 10586526 chr2L 10586591 10586628 6 102 1.5 0.5 1.0 3.0 139 chr2L 10586489 intron Trim9 + chr2L 10586558 intron Trim9 + chr2L 10586628 intron Trim9 + chr2L_6_10585001 chr2L_10585001 RAL-21 221 chr2L 10592824 10592875 chr2L 10600506 10600557 opus 14 7680 2.5 1.5 2.0 4.7 7733 chr2L 10592824 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600557 intron Trim9 + chr2L_14_10595001 chr2L_10595001 RAL-21 222 chr2L 10604176 10604221 chr2L 10604280 10604323 9 102 3.0 1.0 2.0 3.0 147 chr2L 10604176 intron Trim9 + chr2L 10604250 intron Trim9 + chr2L 10604323 intron Trim9 + chr2L_9_10600001 chr2L_10600001 RAL-21 223 chr2L 10620770 10620791 chr2L 10620889 10620889 9 118 1.0 6.0 3.5 2.0 119 chr2L 10620770 intron Trim9 + chr2L 10620830 intron Trim9 + chr2L 10620889 intron Trim9 + chr2L_9_10620001 chr2L_10620001 RAL-21 224 chr2L 10628073 10628124 chr2L 10628182 10628233 10 108 1.5 3.0 2.2 3.1 160 chr2L 10628073 intergenic Trim9 + chr2L 10628153 intergenic Trim9 + chr2L 10628233 intergenic Trim9 + chr2L_10_10625001 chr2L_10625001 RAL-21 225 chr2L 10631231 10631250 chr2L 10631342 10631361 4 110 8.5 0.0 4.2 0.8 130 chr2L 10631231 intron CG7329 - chr2L 10631296 intron CG7329 - chr2L 10631361 intron CG7329 - chr2L_4_10630001 chr2L_10630001 RAL-21 226 chr2L 10633344 10633381 chr2L 10633451 10633468 4 98 1.5 3.0 2.2 1.2 124 chr2L 10633344 intron CG7329 - chr2L 10633406 intron CG7329 - chr2L 10633468 intron CG7329 - chr2L_4_10630001 chr2L_10630001 RAL-21 227 chr2L 10688520 10688571 chr2L 10688616 10688664 10 96 2.5 2.5 2.5 2.9 144 chr2L 10688520 intergenic CG7294 - chr2L 10688592 intergenic CG7294 - chr2L 10688664 intergenic CG7294 - chr2L_10_10685001 chr2L_10685001 RAL-21 228 chr2L 10723519 10723542 chr2L 10723633 10723656 5 114 2.5 1.5 2.0 1.7 137 chr2L 10723519 intergenic not near genes chr2L 10723588 intergenic not near genes chr2L 10723656 intergenic not near genes chr2L_5_10720001 chr2L_10720001 RAL-21 229 chr2L 10755549 10755601 chr2L 10755678 10755730 15 125 0.5 4.5 2.5 4.3 181 chr2L 10755549 intron CG17124 - chr2L 10755640 intron CG17124 - chr2L 10755730 intron CG17124 - chr2L_15_10755001 chr2L_10755001 RAL-21 230 chr2L 10793323 10793330 chr2L 10793423 10793430 4 100 3.5 3.5 3.5 0.9 107 chr2L 10793323 intron CG31869 - chr2L 10793376 intron CG31869 - chr2L 10793430 intron CG31869 - chr2L_4_10790001 chr2L_10790001 RAL-21 231 chr2L 10836740 10836780 chr2L 10836839 10836878 6 98 5.0 2.5 3.8 1.2 138 chr2L 10836740 intron Nos - chr2L 10836809 intron Nos - chr2L 10836878 intron Nos - chr2L_6_10835001 chr2L_10835001 RAL-21 232 chr2L 10892719 10892751 chr2L 10892815 10892832 8 94 7.0 0.5 3.8 1.7 113 chr2L 10892719 intergenic not near genes chr2L 10892776 intergenic not near genes chr2L 10892832 intergenic not near genes chr2L_8_10890001 chr2L_10890001 RAL-21 233 chr2L 11076573 11076582 chr2L 11076665 11076679 7 96 5.0 6.0 5.5 1.1 106 chr2L 11076573 3` UTR AstC - chr2L 11076626 3` UTR AstC - chr2L 11076679 3` UTR AstC - chr2L_7_11075001 chr2L_11075001 RAL-21 234 chr2L 11224042 11224087 chr2L 11224166 11224218 13 128 4.5 4.0 4.2 2.5 176 chr2L 11224042 intron ab + chr2L 11224130 intron ab + chr2L 11224218 intron ab + chr2L_13_11220001 chr2L_11220001 RAL-21 235 chr2L 11292361 11292406 chr2L 11292461 11292503 10 100 2.0 3.0 2.5 2.9 142 chr2L 11292361 intergenic not near genes chr2L 11292432 intergenic not near genes chr2L 11292503 intergenic not near genes chr2L_10_11290001 chr2L_11290001 RAL-21 236 chr2L 11364460 11364506 chr2L 11364556 11364571 5 89 2.5 3.0 2.8 1.3 111 chr2L 11364460 intron salr + chr2L 11364516 intron salr + chr2L 11364571 intron salr + chr2L_5_11360001 chr2L_11360001 RAL-21 237 chr2L 11380636 11380644 chr2L 11380713 11380741 4 92 0.0 3.0 1.5 1.6 105 chr2L 11380636 intergenic not near genes chr2L 11380688 intergenic not near genes chr2L 11380741 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-21 238 chr2L 11399510 11399524 chr2L 11399607 11399621 5 97 0.0 0.0 0.0 5.0 111 chr2L 11399510 intergenic not near genes chr2L 11399566 intergenic not near genes chr2L 11399621 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-21 239 chr2L 11404766 11404800 chr2L 11404862 11404896 8 96 1.0 2.0 1.5 3.2 130 chr2L 11404766 intergenic not near genes chr2L 11404831 intergenic not near genes chr2L 11404896 intergenic not near genes chr2L_8_11400001 chr2L_11400001 RAL-21 240 chr2L 11521246 11521286 chr2L 11521340 11521382 6 92 4.5 2.0 3.2 1.4 136 chr2L 11521246 3` UTR,exon CG14929 +,CG14930 - chr2L 11521314 3` UTR CG14929 + chr2L 11521382 3` UTR CG14929 + chr2L_6_11520001 chr2L_11520001 RAL-21 241 chr2L 11540567 11540615 chr2L 11547992 11548037 Tabor 4 7424 2.5 3.0 2.8 1.1 7470 chr2L 11540567 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548037 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-21 242 chr2L 11555413 11555424 chr2L 11555552 11555563 5 139 2.5 2.0 2.2 1.6 150 chr2L 11555413 intergenic not near genes chr2L 11555488 intergenic not near genes chr2L 11555563 intergenic not near genes chr2L_5_11555001 chr2L_11555001 RAL-21 243 chr2L 11563625 11563660 chr2L 11568848 11568884 copia 8 5224 3.5 5.5 4.5 1.5 5259 chr2L 11563625 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568884 intergenic not near genes chr2L_8_11565001 chr2L_11565001 RAL-21 244 chr2L 11657952 11657988 chr2L 11658057 11658091 5 101 0.5 1.0 0.8 2.8 139 chr2L 11657952 3` UTR CG43167 + chr2L 11658022 intergenic CG43167 + chr2L 11658091 intergenic CG43167 + chr2L_5_11655001 chr2L_11655001 RAL-21 245 chr2L 11665821 11665869 chr2L 11665919 11665967 8 98 0.0 3.5 1.8 2.9 146 chr2L 11665821 intergenic CR44481 + chr2L 11665894 intergenic CR44481 + chr2L 11665967 intergenic CR44481 + chr2L_8_11665001 chr2L_11665001 RAL-21 246 chr2L 11672124 11672164 chr2L 11672251 11672281 12 126 5.5 3.5 4.5 2.2 157 chr2L 11672124 intergenic not near genes chr2L 11672202 intergenic not near genes chr2L 11672281 intergenic not near genes chr2L_12_11670001 chr2L_11670001 RAL-21 247 chr2L 11696866 11696902 chr2L 11696971 11697007 11 104 2.0 2.5 2.2 3.4 141 chr2L 11696866 intergenic not near genes chr2L 11696936 intergenic not near genes chr2L 11697007 intergenic not near genes chr2L_11_11695001 chr2L_11695001 RAL-21 248 chr2L 11702636 11702657 chr2L 11702750 11702771 8 114 0.0 2.5 1.2 3.6 135 chr2L 11702636 intergenic not near genes chr2L 11702704 intergenic not near genes chr2L 11702771 intergenic not near genes chr2L_8_11700001 chr2L_11700001 RAL-21 249 chr2L 11713490 11713506 chr2L 11720978 11720978 blood 4 7482 3.0 3.5 3.2 1.0 7488 chr2L 11713490 intergenic not near genes chr2L 11717234 intergenic not near genes chr2L 11720978 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-21 250 chr2L 11713514 11713538 chr2L 11720975 11721026 blood 12 7484 3.0 3.5 3.2 2.9 7512 chr2L 11713514 intergenic not near genes chr2L 11717270 intergenic not near genes chr2L 11721026 intergenic CR44143 + chr2L_12_11715001 chr2L_11715001 RAL-21 251 chr2L 11752846 11752888 chr2L 11753156 11753198 18 307 4.5 4.0 4.2 3.5 352 chr2L 11752846 intergenic CG42470 - chr2L 11753022 3` UTR CG42470 - chr2L 11753198 3` UTR CG42470 - chr2L_18_11750001 chr2L_11750001 RAL-21 252 chr2L 11765056 11765067 chr2L 11765433 11765442 4 376 7.0 4.0 5.5 0.6 386 chr2L 11765056 intergenic not near genes chr2L 11765249 intergenic not near genes chr2L 11765442 intergenic not near genes chr2L_4_11765001 chr2L_11765001 RAL-21 253 chr2L 11765076 11765093 chr2L 11765428 11765432 4 361 3.5 4.0 3.8 0.8 356 chr2L 11765076 intergenic not near genes chr2L 11765254 intergenic not near genes chr2L 11765432 intergenic not near genes chr2L_4_11765001 chr2L_11765001 RAL-21 254 chr2L 11770577 11770625 chr2L 11770684 11770730 8 107 1.5 1.5 1.5 3.2 153 chr2L 11770577 intergenic not near genes chr2L 11770654 intergenic not near genes chr2L 11770730 intergenic not near genes chr2L_8_11770001 chr2L_11770001 RAL-21 255 chr2L 11781014 11781188 chr2L 11781118 11781284 7 97 0.0 0.0 0.0 7.0 270 chr2L 11781014 intergenic not near genes chr2L 11781149 intergenic not near genes chr2L 11781284 intergenic not near genes chr2L_7_11780001 chr2L_11780001 RAL-21 256 chr2L 11820426 11820467 chr2L 11820527 11820568 16 101 1.5 8.0 4.8 2.8 142 chr2L 11820426 intron Pde1c - chr2L 11820497 intron Pde1c - chr2L 11820568 intron Pde1c - chr2L_16_11820001 chr2L_11820001 RAL-21 257 chr2L 11841339 11841355 chr2L 11841445 11841446 4 108 5.0 0.0 2.5 1.1 107 chr2L 11841339 intron Pde1c - chr2L 11841392 intron Pde1c - chr2L 11841446 intron Pde1c - chr2L_4_11840001 chr2L_11840001 RAL-21 258 chr2L 11883653 11883706 chr2L 11883755 11883808 15 102 0.5 6.0 3.2 3.6 155 chr2L 11883653 intron Pde1c - chr2L 11883730 intron Pde1c - chr2L 11883808 intron Pde1c - chr2L_15_11880001 chr2L_11880001 RAL-21 259 chr2L 11895852 11895897 chr2L 11895950 11895995 5 98 1.0 5.0 3.0 1.2 143 chr2L 11895852 intron Pde1c - chr2L 11895924 intron Pde1c - chr2L 11895995 intron Pde1c - chr2L_5_11895001 chr2L_11895001 RAL-21 260 chr2L 12031377 12031417 chr2L 12031478 12031518 12 100 4.5 3.5 4.0 2.4 141 chr2L 12031377 intron dmGlut + chr2L 12031448 intron dmGlut + chr2L 12031518 intron dmGlut + chr2L_12_12030001 chr2L_12030001 RAL-21 261 chr2L 12067309 12067336 chr2L 12074380 12074408 297 7 7071 7.0 3.0 5.0 1.2 7099 chr2L 12067309 intergenic not near genes chr2L 12070858 intergenic not near genes chr2L 12074408 intergenic not near genes chr2L_7_12070001 chr2L_12070001 RAL-21 262 chr2L 12079362 12079379 chr2L 12079486 12079497 5 123 3.5 3.5 3.5 1.1 135 chr2L 12079362 intergenic CR44591 + chr2L 12079430 intergenic CR44591 + chr2L 12079497 intergenic CR44591 + chr2L_5_12075001 chr2L_12075001 RAL-21 263 chr2L 12112030 12112045 chr2L 12112159 12112176 5 129 0.5 10.0 5.2 0.8 146 chr2L 12112030 3` UTR Phae2 + chr2L 12112103 3` UTR Phae2 + chr2L 12112176 3` UTR Phae2 + chr2L_5_12110001 chr2L_12110001 RAL-21 264 chr2L 12131448 12131489 chr2L 12131564 12131582 16 114 6.5 3.5 5.0 2.7 134 chr2L 12131448 intron rho-6 - chr2L 12131515 intron rho-6 - chr2L 12131582 intron rho-6 - chr2L_16_12130001 chr2L_12130001 RAL-21 265 chr2L 12132704 12132742 chr2L 12132810 12132848 12 106 0.0 3.0 1.5 4.8 144 chr2L 12132704 intron rho-6 - chr2L 12132776 intron rho-6 - chr2L 12132848 intron rho-6 - chr2L_12_12130001 chr2L_12130001 RAL-21 266 chr2L 12169531 12169564 chr2L 12169631 12169664 10 100 6.0 0.0 3.0 2.5 133 chr2L 12169531 3` UTR CG31760 + chr2L 12169598 3` UTR CG31760 + chr2L 12169664 3` UTR CG31760 + chr2L_10_12165001 chr2L_12165001 RAL-21 267 chr2L 12175797 12175848 chr2L 12175898 12175950 5 102 2.0 0.0 1.0 2.5 153 chr2L 12175797 intron,intron aret +,atilla - chr2L 12175874 intron,intron aret +,atilla - chr2L 12175950 intron,intron aret +,atilla - chr2L_5_12175001 chr2L_12175001 RAL-21 268 chr2L 12196903 12196915 chr2L 12197071 12197085 4 170 4.0 0.0 2.0 1.3 182 chr2L 12196903 intron aret + chr2L 12196994 intron aret + chr2L 12197085 intron aret + chr2L_4_12195001 chr2L_12195001 RAL-21 269 chr2L 12229557 12229607 chr2L 12229654 12229704 17 96 1.0 0.5 0.8 9.4 147 chr2L 12229557 intron aret + chr2L 12229630 intron aret + chr2L 12229704 intron aret + chr2L_17_12225001 chr2L_12225001 RAL-21 270 chr2L 12242666 12242694 chr2L 12243842 12243870 7 1174 4.0 6.5 5.2 1.1 1204 chr2L 12242666 intron aret + chr2L 12243268 intron aret + chr2L 12243870 intron aret + chr2L_7_12240001 chr2L_12240001 RAL-21 271 chr2L 12254016 12254058 chr2L 12254128 12254138 5 106 2.0 0.0 1.0 2.5 122 chr2L 12254016 intron aret + chr2L 12254077 intron aret + chr2L 12254138 intron aret + chr2L_5_12250001 chr2L_12250001 RAL-21 272 chr2L 12276394 12276445 chr2L 12276491 12276525 23 94 4.0 2.0 3.0 5.8 131 chr2L 12276394 intron aret + chr2L 12276460 intron aret + chr2L 12276525 intron aret + chr2L_23_12275001 chr2L_12275001 RAL-21 273 chr2L 12294232 12294277 chr2L 12294333 12294379 9 101 1.0 0.5 0.8 5.0 147 chr2L 12294232 intron aret + chr2L 12294306 intron aret + chr2L 12294379 intron aret + chr2L_9_12290001 chr2L_12290001 RAL-21 274 chr2L 12317630 12317667 chr2L 12317707 12317764 8 87 4.0 3.5 3.8 1.7 134 chr2L 12317630 intergenic CR45283 - chr2L 12317697 intergenic CR45283 - chr2L 12317764 intergenic CR45283 - chr2L_8_12315001 chr2L_12315001 RAL-21 275 chr2L 12366843 12366891 chr2L 12366949 12366997 15 106 1.5 3.5 2.5 4.3 154 chr2L 12366843 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12366997 intron bru-2 + chr2L_15_12365001 chr2L_12365001 RAL-21 276 chr2L 12424344 12424377 chr2L 12424440 12424473 8 96 0.0 5.0 2.5 2.3 129 chr2L 12424344 intergenic not near genes chr2L 12424408 intergenic CG6405 + chr2L 12424473 intergenic CG6405 + chr2L_8_12420001 chr2L_12420001 RAL-21 277 chr2L 12426121 12426162 chr2L 12426223 12426264 4 99 1.5 4.0 2.8 1.1 143 chr2L 12426121 exon CG6405 + chr2L 12426192 exon CG6405 + chr2L 12426264 exon CG6405 + chr2L_4_12425001 chr2L_12425001 RAL-21 278 chr2L 12440752 12440771 chr2L 12440863 12440882 10 111 2.0 5.5 3.8 2.1 130 chr2L 12440752 3` UTR Elf + chr2L 12440817 3` UTR Elf + chr2L 12440882 3` UTR Elf + chr2L_10_12440001 chr2L_12440001 RAL-21 279 chr2L 12481360 12481400 chr2L 12481462 12481487 5 99 3.0 1.0 2.0 1.7 127 chr2L 12481360 intron bun - chr2L 12481424 intron bun - chr2L 12481487 intron bun - chr2L_5_12480001 chr2L_12480001 RAL-21 280 chr2L 12487878 12487883 chr2L 12487979 12487983 4 100 10.0 7.0 8.5 0.4 105 chr2L 12487878 intron bun - chr2L 12487930 intron bun - chr2L 12487983 intron bun - chr2L_4_12485001 chr2L_12485001 RAL-21 281 chr2L 12487884 12487912 chr2L 12487974 12488013 7 92 5.5 7.0 6.2 1.0 129 chr2L 12487884 intron bun - chr2L 12487948 intron bun - chr2L 12488013 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-21 282 chr2L 12507264 12507294 chr2L 12507373 12507404 5 109 2.5 0.0 1.2 2.3 140 chr2L 12507264 intron bun - chr2L 12507334 intron bun - chr2L 12507404 intron bun - chr2L_5_12505001 chr2L_12505001 RAL-21 283 chr2L 12529224 12529424 chr2L 12529377 12529520 12 122 0.5 0.5 0.5 8.0 296 chr2L 12529224 intron bun - chr2L 12529372 intron bun - chr2L 12529520 intron bun - chr2L_12_12525001 chr2L_12525001 RAL-21 284 chr2L 12558310 12558338 chr2L 12565458 12565482 HMS-Beagle 4 7144 4.0 5.5 4.8 0.7 7172 chr2L 12558310 intergenic not near genes chr2L 12561896 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-21 285 chr2L 12558342 12558348 chr2L 12565456 12565496 HMS-Beagle 5 7138 2.5 4.5 3.5 1.1 7154 chr2L 12558342 intergenic not near genes chr2L 12561919 intergenic not near genes chr2L 12565496 intergenic not near genes chr2L_5_12560001 chr2L_12560001 RAL-21 286 chr2L 12728906 12728933 chr2L 12729166 12729193 pogo 7 258 5.5 1.5 3.5 1.6 287 chr2L 12728906 intron MRP + chr2L 12729050 intron MRP + chr2L 12729193 exon MRP + chr2L_7_12725001 chr2L_12725001 RAL-21 287 chr2L 12731048 12731089 chr2L 12735835 12735873 F-element 7 4782 2.0 3.0 2.5 2.0 4825 chr2L 12731048 intron MRP + chr2L 12733460 intron MRP + chr2L 12735873 intron MRP + chr2L_7_12730001 chr2L_12730001 RAL-21 288 chr2L 12739166 12739198 chr2L 12743967 12743999 Doc 7 4800 2.5 3.0 2.8 1.8 4833 chr2L 12739166 exon MRP + chr2L 12741582 intron MRP + chr2L 12743999 exon MRP + chr2L_7_12740001 chr2L_12740001 RAL-21 289 chr2L 12746550 12746580 chr2L 12746669 12746699 16 119 5.0 0.0 2.5 4.6 149 chr2L 12746550 intergenic not near genes chr2L 12746624 intergenic not near genes chr2L 12746699 intergenic not near genes chr2L_16_12745001 chr2L_12745001 RAL-21 290 chr2L 12759186 12759237 chr2L 12759301 12759352 13 112 0.0 0.0 0.0 13.0 166 chr2L 12759186 intergenic not near genes chr2L 12759269 intergenic not near genes chr2L 12759352 intergenic not near genes chr2L_13_12755001 chr2L_12755001 RAL-21 291 chr2L 12766740 12766771 chr2L 12766838 12766868 11 97 4.5 2.5 3.5 2.4 128 chr2L 12766740 intergenic not near genes chr2L 12766804 intergenic not near genes chr2L 12766868 intergenic not near genes chr2L_11_12765001 chr2L_12765001 RAL-21 292 chr2L 12791587 12791640 chr2L 12795282 12795298 F-element 17 3690 1.5 5.0 3.2 4.0 3711 chr2L 12791587 intergenic not near genes chr2L 12793442 intergenic not near genes chr2L 12795298 intergenic not near genes chr2L_17_12790001 chr2L_12790001 RAL-21 293 chr2L 12905466 12905496 chr2L 12905570 12905590 5 100 2.0 4.0 3.0 1.2 124 chr2L 12905466 intergenic not near genes chr2L 12905528 intergenic not near genes chr2L 12905590 intergenic not near genes chr2L_5_12905001 chr2L_12905001 RAL-21 294 chr2L 12933828 12933882 chr2L 12941315 12941369 blood 12 7486 2.5 2.0 2.2 3.8 7541 chr2L 12933828 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941369 intergenic not near genes chr2L_12_12935001 chr2L_12935001 RAL-21 295 chr2L 12945956 12946003 chr2L 12946055 12946098 9 94 3.5 0.0 1.8 3.2 142 chr2L 12945956 intergenic not near genes chr2L 12946027 intergenic not near genes chr2L 12946098 intergenic not near genes chr2L_9_12945001 chr2L_12945001 RAL-21 296 chr2L 12963775 12963825 chr2L 12963897 12963937 9 117 0.5 2.5 1.5 3.6 162 chr2L 12963775 intergenic not near genes chr2L 12963856 intergenic not near genes chr2L 12963937 intergenic not near genes chr2L_9_12960001 chr2L_12960001 RAL-21 297 chr2L 13033836 13033861 chr2L 13033944 13033969 5 107 2.0 5.0 3.5 1.1 133 chr2L 13033836 intron CG9932 - chr2L 13033902 intron CG9932 - chr2L 13033969 intron CG9932 - chr2L_5_13030001 chr2L_13030001 RAL-21 298 chr2L 13080100 13080153 chr2L 13080200 13080253 14 95 2.0 1.5 1.8 5.0 153 chr2L 13080100 intergenic not near genes chr2L 13080176 intergenic not near genes chr2L 13080253 intergenic not near genes chr2L_14_13080001 chr2L_13080001 RAL-21 299 chr2L 13093834 13093865 chr2L 13093932 13093963 5 98 4.5 1.5 3.0 1.2 129 chr2L 13093834 intergenic not near genes chr2L 13093898 intergenic not near genes chr2L 13093963 intergenic not near genes chr2L_5_13090001 chr2L_13090001 RAL-21 300 chr2L 13212621 13212649 chr2L 13213576 13213604 18 954 21.0 21.0 21.0 0.8 983 chr2L 13212621 3` UTR kek4 - chr2L 13213112 exon kek4 - chr2L 13213604 exon kek4 - chr2L_18_13210001 chr2L_13210001 RAL-21 301 chr2L 13212583 13212630 chr2L 13214584 13214606 7 1986 20.5 18.5 19.5 0.3 2023 chr2L 13212583 3` UTR kek4 - chr2L 13213594 exon kek4 - chr2L 13214606 exon kek4 - chr2L_7_13210001 chr2L_13210001 RAL-21 302 chr2L 13241823 13241844 chr2L 13241906 13241949 4 99 1.0 0.0 0.5 2.7 126 chr2L 13241823 5` UTR CR45330 + chr2L 13241886 5` UTR CR45330 + chr2L 13241949 5` UTR CR45330 + chr2L_4_13240001 chr2L_13240001 RAL-21 303 chr2L 13241939 13241950 chr2L 13244343 13244354 BS 4 2404 0.0 0.5 0.2 3.3 2415 chr2L 13241939 5` UTR CR45330 + chr2L 13243146 intron CR45330 + chr2L 13244354 5` UTR CR45330 + chr2L_4_13240001 chr2L_13240001 RAL-21 304 chr2L 13374306 13374349 chr2L 13374413 13374427 16 99 2.0 1.5 1.8 5.7 121 chr2L 13374306 5` UTR CG6565 + chr2L 13374366 5` UTR CG6565 + chr2L 13374427 5` UTR CG6565 + chr2L_16_13370001 chr2L_13370001 RAL-21 305 chr2L 13398700 13398751 chr2L 13398800 13398851 17 100 4.5 4.5 4.5 3.1 151 chr2L 13398700 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398776 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398851 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_17_13395001 chr2L_13395001 RAL-21 306 chr2L 13405631 13405671 chr2L 13410447 13410486 Doc 14 4814 1.0 5.0 3.0 3.5 4855 chr2L 13405631 exon CG7110 + chr2L 13408058 intron CG7110 + chr2L 13410486 intron CG7110 + chr2L_14_13405001 chr2L_13405001 RAL-21 307 chr2L 13422485 13422496 chr2L 13422584 13422595 6 99 0.0 8.0 4.0 1.2 110 chr2L 13422485 intron CG42784 + chr2L 13422540 intron CG42784 + chr2L 13422595 intron CG42784 + chr2L_6_13420001 chr2L_13420001 RAL-21 308 chr2L 13449447 13449494 chr2L 13456902 13456949 Quasimodo 17 7455 0.5 4.5 2.5 4.9 7502 chr2L 13449447 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456949 intron CG42784 + chr2L_17_13450001 chr2L_13450001 RAL-21 309 chr2L 13481448 13481474 chr2L 13482073 13482101 jockey 5 627 4.0 3.5 3.8 1.0 653 chr2L 13481448 intron CG42784 + chr2L 13481774 intron CG42784 + chr2L 13482101 intron CG42784 + chr2L_5_13480001 chr2L_13480001 RAL-21 310 chr2L 13515365 13515373 chr2L 13515462 13515470 5 97 14.5 12.0 13.2 0.4 105 chr2L 13515365 intron B4 - chr2L 13515418 intron B4 - chr2L 13515470 intron B4 - chr2L_5_13515001 chr2L_13515001 RAL-21 311 chr2L 13522118 13522158 chr2L 13527656 13527696 Transpac 19 5535 2.0 4.5 3.2 4.5 5578 chr2L 13522118 intron B4 - chr2L 13524907 intron B4 - chr2L 13527696 intron B4 - chr2L_19_13520001 chr2L_13520001 RAL-21 312 chr2L 13560392 13560417 chr2L 13565232 13565257 F-element 7 4840 5.0 1.5 3.2 1.7 4865 chr2L 13560392 intron kuz + chr2L 13562824 intron kuz + chr2L 13565257 intron kuz + chr2L_7_13560001 chr2L_13560001 RAL-21 313 chr2L 13598995 13599019 chr2L 13599118 13599142 6 123 5.0 3.5 4.2 1.2 147 chr2L 13598995 intron kuz + chr2L 13599068 intron kuz + chr2L 13599142 intron kuz + chr2L_6_13595001 chr2L_13595001 RAL-21 314 chr2L 13720224 13720243 chr2L 13720332 13720351 4 108 6.0 0.0 3.0 1.0 127 chr2L 13720224 intergenic not near genes chr2L 13720288 intergenic not near genes chr2L 13720351 intergenic not near genes chr2L_4_13720001 chr2L_13720001 RAL-21 315 chr2L 13761795 13761822 chr2L 13762921 13762933 Doc 8 1125 5.0 6.5 5.8 1.2 1138 chr2L 13761795 intron TM9SF4 + chr2L 13762364 intron TM9SF4 + chr2L 13762933 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 RAL-21 316 chr2L 13800163 13800207 chr2L 13800276 13800331 10 123 1.5 2.5 2.0 3.3 168 chr2L 13800163 intergenic Sec71 + chr2L 13800247 intergenic not near genes chr2L 13800331 intergenic not near genes chr2L_10_13800001 chr2L_13800001 RAL-21 317 chr2L 13842120 13842165 chr2L 13842224 13842269 11 103 3.5 2.5 3.0 2.8 149 chr2L 13842120 intron CenG1A + chr2L 13842194 intron CenG1A + chr2L 13842269 intron CenG1A + chr2L_11_13840001 chr2L_13840001 RAL-21 318 chr2L 13853069 13853111 chr2L 13862239 13862281 roo 9 9169 3.5 9.0 6.2 1.2 9212 chr2L 13853069 intron CenG1A + chr2L 13857675 intron CenG1A + chr2L 13862281 intron CenG1A + chr2L_9_13855001 chr2L_13855001 RAL-21 319 chr2L 13913579 13913597 chr2L 13913712 13913730 6 133 5.0 8.0 6.5 0.8 151 chr2L 13913579 intergenic not near genes chr2L 13913654 intergenic not near genes chr2L 13913730 intergenic not near genes chr2L_6_13910001 chr2L_13910001 RAL-21 320 chr2L 13936032 13936033 chr2L 13938696 13938734 10 2668 20.0 28.0 24.0 0.4 2702 chr2L 13936032 intron Ance-3 + chr2L 13937383 intron Ance-3 + chr2L 13938734 intron Ance-3 + chr2L_10_13935001 chr2L_13935001 RAL-21 321 chr2L 13987194 13987234 chr2L 13987295 13987335 7 98 2.0 3.5 2.8 1.8 141 chr2L 13987194 intron rk - chr2L 13987264 intron rk - chr2L 13987335 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-21 322 chr2L 13988263 13988304 chr2L 13988370 13988406 6 106 1.0 7.0 4.0 1.2 143 chr2L 13988263 intron rk - chr2L 13988334 intron rk - chr2L 13988406 intron rk - chr2L_6_13985001 chr2L_13985001 RAL-21 323 chr2L 14151576 14151627 chr2L 14151674 14151725 7 94 2.5 2.5 2.5 2.0 149 chr2L 14151576 intron CG17341 + chr2L 14151650 intron CG17341 + chr2L 14151725 intron CG17341 + chr2L_7_14150001 chr2L_14150001 RAL-21 324 chr2L 14152555 14152606 chr2L 14152666 14152717 4 111 1.5 0.0 0.8 2.2 162 chr2L 14152555 intron CG17341 + chr2L 14152636 intron CG17341 + chr2L 14152717 intron CG17341 + chr2L_4_14150001 chr2L_14150001 RAL-21 325 chr2L 14160694 14160719 chr2L 14160774 14160825 9 102 1.5 4.5 3.0 2.2 131 chr2L 14160694 intergenic CG17341 +,CG43332 - chr2L 14160760 intergenic CG17341 +,CG43332 - chr2L 14160825 intergenic CG17341 +,CG43332 - chr2L_9_14160001 chr2L_14160001 RAL-21 326 chr2L 14190129 14190157 chr2L 14190725 14190753 4 594 3.0 4.5 3.8 0.8 624 chr2L 14190129 intron Dyrk2 - chr2L 14190441 intron Dyrk2 - chr2L 14190753 intron Dyrk2 - chr2L_4_14190001 chr2L_14190001 RAL-21 327 chr2L 14246290 14246300 chr2L 14246387 14246398 9 98 0.5 0.0 0.2 7.5 108 chr2L 14246290 intergenic not near genes chr2L 14246344 intergenic not near genes chr2L 14246398 intergenic not near genes chr2L_9_14245001 chr2L_14245001 RAL-21 328 chr2L 14462709 14462823 chr2L 14462816 14462939 5 112 0.0 0.0 0.0 5.0 230 chr2L 14462709 intergenic not near genes chr2L 14462824 intergenic not near genes chr2L 14462939 intergenic not near genes chr2L_5_14460001 chr2L_14460001 RAL-21 329 chr2L 14503425 14503435 chr2L 14503514 14503533 6 97 4.0 0.5 2.2 1.9 108 chr2L 14503425 intergenic not near genes chr2L 14503479 intergenic not near genes chr2L 14503533 intergenic not near genes chr2L_6_14500001 chr2L_14500001 RAL-21 330 chr2L 14570700 14570716 chr2L 14570801 14570817 4 101 0.0 2.5 1.2 1.8 117 chr2L 14570700 intergenic not near genes chr2L 14570758 intergenic not near genes chr2L 14570817 intergenic not near genes chr2L_4_14570001 chr2L_14570001 RAL-21 331 chr2L 14588365 14588416 chr2L 14588539 14588579 8 170 3.5 3.0 3.2 1.9 214 chr2L 14588365 intergenic CG42680 - chr2L 14588472 intergenic CG42680 - chr2L 14588579 intergenic CG42680 - chr2L_8_14585001 chr2L_14585001 RAL-21 332 chr2L 14632147 14632194 chr2L 14632252 14632300 11 105 3.0 0.5 1.8 3.9 153 chr2L 14632147 intron osp - chr2L 14632224 intron osp - chr2L 14632300 intron osp - chr2L_11_14630001 chr2L_14630001 RAL-21 333 chr2L 14642554 14642601 chr2L 14651737 14651784 roo 12 9181 1.5 4.0 2.8 3.2 9230 chr2L 14642554 intron osp - chr2L 14647169 intron osp - chr2L 14651784 intron osp - chr2L_12_14645001 chr2L_14645001 RAL-21 334 chr2L 14715526 14715562 chr2L 14715637 14715673 10 111 1.5 2.5 2.0 3.3 147 chr2L 14715526 intergenic not near genes chr2L 14715600 intergenic not near genes chr2L 14715673 intergenic not near genes chr2L_10_14715001 chr2L_14715001 RAL-21 335 chr2L 14724476 14724520 chr2L 14724575 14724619 10 99 4.0 5.5 4.8 1.7 143 chr2L 14724476 intergenic CG42685 - chr2L 14724548 intergenic CG42685 - chr2L 14724619 3` UTR CG42685 - chr2L_10_14720001 chr2L_14720001 RAL-21 336 chr2L 14781541 14781590 chr2L 14781662 14781711 7 121 1.0 2.0 1.5 2.8 170 chr2L 14781541 intergenic not near genes chr2L 14781626 intergenic not near genes chr2L 14781711 intergenic not near genes chr2L_7_14780001 chr2L_14780001 RAL-21 337 chr2L 14803861 14803912 chr2L 14809084 14809135 copia 6 5222 3.5 4.0 3.8 1.2 5274 chr2L 14803861 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809135 intergenic not near genes chr2L_6_14805001 chr2L_14805001 RAL-21 338 chr2L 14840956 14841002 chr2L 14841063 14841064 7 98 4.5 1.5 3.0 1.8 108 chr2L 14840956 3` UTR CR43805 - chr2L 14841010 3` UTR CR43805 - chr2L 14841064 3` UTR CR43805 - chr2L_7_14840001 chr2L_14840001 RAL-21 339 chr2L 14842391 14842440 chr2L 14842495 14842514 13 102 1.5 4.0 2.8 3.4 123 chr2L 14842391 exon CG42682 + chr2L 14842452 intron CG42682 + chr2L 14842514 intron CG42682 + chr2L_13_14840001 chr2L_14840001 RAL-21 340 chr2L 14850673 14850685 chr2L 14850772 14850773 7 97 6.5 6.0 6.2 1.0 100 chr2L 14850673 intron CG15279 - chr2L 14850723 intron CG15279 - chr2L 14850773 intron CG15279 - chr2L_7_14850001 chr2L_14850001 RAL-21 341 chr2L 14850688 14850715 chr2L 14850766 14850808 8 94 3.0 5.5 4.2 1.5 120 chr2L 14850688 intron CG15279 - chr2L 14850748 intron CG15279 - chr2L 14850808 intron CG15279 - chr2L_8_14850001 chr2L_14850001 RAL-21 342 chr2L 14864518 14864534 chr2L 14864621 14864637 4 103 9.0 3.0 6.0 0.6 119 chr2L 14864518 intergenic not near genes chr2L 14864578 intergenic not near genes chr2L 14864637 intergenic not near genes chr2L_4_14860001 chr2L_14860001 RAL-21 343 chr2L 15013134 15013180 chr2L 15013257 15013309 7 121 2.5 3.0 2.8 1.8 175 chr2L 15013134 intergenic CR43856 - chr2L 15013222 intergenic not near genes chr2L 15013309 intergenic not near genes chr2L_7_15010001 chr2L_15010001 RAL-21 344 chr2L 15026007 15026046 chr2L 15026108 15026135 11 94 3.0 3.5 3.2 2.6 128 chr2L 15026007 exon GABA-B-R1 + chr2L 15026071 intron GABA-B-R1 + chr2L 15026135 intron GABA-B-R1 + chr2L_11_15025001 chr2L_15025001 RAL-21 345 chr2L 15044689 15044740 chr2L 15044785 15044836 19 95 5.5 6.5 6.0 2.7 147 chr2L 15044689 intergenic ck - chr2L 15044762 intergenic ck - chr2L 15044836 intergenic ck - chr2L_19_15040001 chr2L_15040001 RAL-21 346 chr2L 15078049 15078092 chr2L 15078157 15078174 11 104 2.0 3.0 2.5 3.1 125 chr2L 15078049 intron CG15270 + chr2L 15078112 intron CG15270 + chr2L 15078174 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-21 347 chr2L 15080886 15080899 chr2L 15080999 15081008 4 110 7.5 0.5 4.0 0.8 122 chr2L 15080886 intron CG15270 + chr2L 15080947 intron CG15270 + chr2L 15081008 intron CG15270 + chr2L_4_15080001 chr2L_15080001 RAL-21 348 chr2L 15080909 15080935 chr2L 15080998 15081052 11 113 1.0 0.5 0.8 6.1 143 chr2L 15080909 intron CG15270 + chr2L 15080980 intron CG15270 + chr2L 15081052 intron CG15270 + chr2L_11_15080001 chr2L_15080001 RAL-21 349 chr2L 15122796 15122804 chr2L 15122894 15122903 4 99 0.0 8.0 4.0 0.8 107 chr2L 15122796 intergenic not near genes chr2L 15122850 intergenic not near genes chr2L 15122903 intergenic not near genes chr2L_4_15120001 chr2L_15120001 RAL-21 350 chr2L 15125579 15125626 chr2L 15125679 15125726 15 100 3.5 4.5 4.0 3.0 147 chr2L 15125579 intergenic not near genes chr2L 15125652 intergenic not near genes chr2L 15125726 intergenic not near genes chr2L_15_15125001 chr2L_15125001 RAL-21 351 chr2L 15219668 15219687 chr2L 15219765 15219784 5 96 3.5 3.0 3.2 1.2 116 chr2L 15219668 intergenic not near genes chr2L 15219726 intergenic not near genes chr2L 15219784 intergenic not near genes chr2L_5_15215001 chr2L_15215001 RAL-21 352 chr2L 15226351 15226392 chr2L 15226447 15226479 9 90 2.0 3.0 2.5 2.6 128 chr2L 15226351 intergenic not near genes chr2L 15226415 intergenic not near genes chr2L 15226479 intergenic not near genes chr2L_9_15225001 chr2L_15225001 RAL-21 353 chr2L 15252961 15253008 chr2L 15253060 15253107 20 99 2.0 2.0 2.0 6.7 146 chr2L 15252961 intron dao + chr2L 15253034 intron dao + chr2L 15253107 intron dao + chr2L_20_15250001 chr2L_15250001 RAL-21 354 chr2L 15318952 15318980 chr2L 15319048 15319077 7 96 0.0 5.0 2.5 2.0 125 chr2L 15318952 intergenic nht - chr2L 15319014 intergenic nht - chr2L 15319077 intergenic nht - chr2L_7_15315001 chr2L_15315001 RAL-21 355 chr2L 15446044 15446080 chr2L 15453518 15453569 blood 9 7486 4.5 1.0 2.8 2.4 7525 chr2L 15446044 intergenic not near genes chr2L 15449806 intergenic not near genes chr2L 15453569 intergenic not near genes chr2L_9_15445001 chr2L_15445001 RAL-21 356 chr2L 15468765 15468806 chr2L 15468865 15468911 9 102 2.0 5.0 3.5 2.0 146 chr2L 15468765 intergenic CR45353 - chr2L 15468838 intergenic CR45353 - chr2L 15468911 intergenic CR45353 - chr2L_9_15465001 chr2L_15465001 RAL-21 357 chr2L 15490026 15490045 chr2L 15490140 15490181 5 131 0.0 4.0 2.0 1.7 155 chr2L 15490026 intergenic not near genes chr2L 15490104 intergenic not near genes chr2L 15490181 intergenic not near genes chr2L_5_15490001 chr2L_15490001 RAL-21 358 chr2L 15499896 15499937 chr2L 15500004 15500044 5 108 0.5 3.0 1.8 1.8 148 chr2L 15499896 intron lace + chr2L 15499970 intron lace + chr2L 15500044 intron lace + chr2L_5_15495001 chr2L_15495001 RAL-21 359 chr2L 15586398 15586433 chr2L 15593464 15593505 297 5 7071 5.0 6.0 5.5 0.8 7107 chr2L 15586398 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593505 intergenic not near genes chr2L_5_15585001 chr2L_15585001 RAL-21 360 chr2L 15598749 15598797 chr2L 15598848 15598896 6 98 5.5 0.0 2.8 1.6 147 chr2L 15598749 intergenic not near genes chr2L 15598822 intergenic not near genes chr2L 15598896 intergenic not near genes chr2L_6_15595001 chr2L_15595001 RAL-21 361 chr2L 15732496 15732535 chr2L 15732611 15732650 13 114 4.0 1.5 2.8 3.4 154 chr2L 15732496 intron CycE - chr2L 15732573 intron CycE - chr2L 15732650 intron CycE - chr2L_13_15730001 chr2L_15730001 RAL-21 362 chr2L 15785926 15785970 chr2L 15786013 15786067 12 84 3.0 6.0 4.5 2.2 141 chr2L 15785926 exon CG18109 + chr2L 15785996 exon CG18109 + chr2L 15786067 exon CG18109 + chr2L_12_15785001 chr2L_15785001 RAL-21 363 chr2L 15813998 15814050 chr2L 15814105 15814157 11 107 0.0 2.5 1.2 5.0 159 chr2L 15813998 intergenic not near genes chr2L 15814078 intergenic not near genes chr2L 15814157 intergenic not near genes chr2L_11_15810001 chr2L_15810001 RAL-21 364 chr2L 15819621 15819629 chr2L 15822576 15822622 13 2960 5.5 24.5 15.0 0.8 3001 chr2L 15819621 intergenic not near genes chr2L 15821122 intergenic not near genes chr2L 15822622 3` UTR CR44601 - chr2L_13_15820001 chr2L_15820001 RAL-21 365 chr2L 15826876 15826891 chr2L 15829290 15829305 Tabor 4 2414 5.0 6.5 5.8 0.6 2429 chr2L 15826876 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829305 intergenic not near genes chr2L_4_15825001 chr2L_15825001 RAL-21 366 chr2L 15915640 15915680 chr2L 15915733 15915743 8 93 3.5 6.0 4.8 1.4 103 chr2L 15915640 intron beat-Ib - chr2L 15915692 intron beat-Ib - chr2L 15915743 intron beat-Ib - chr2L_8_15915001 chr2L_15915001 RAL-21 367 chr2L 15956023 15956055 chr2L 15957489 15957517 hobo 8 1476 3.0 3.5 3.2 1.9 1494 chr2L 15956023 intron beat-Ib - chr2L 15956770 intron beat-Ib - chr2L 15957517 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-21 368 chr2L 15995207 15995242 chr2L 15995565 15995601 4 356 3.0 2.5 2.8 1.1 394 chr2L 15995207 intergenic not near genes chr2L 15995404 intergenic not near genes chr2L 15995601 intergenic not near genes chr2L_4_15995001 chr2L_15995001 RAL-21 369 chr2L 15995243 15995248 chr2L 15995563 15995607 4 349 2.5 2.5 2.5 1.1 364 chr2L 15995243 intergenic not near genes chr2L 15995425 intergenic not near genes chr2L 15995607 intergenic not near genes chr2L_4_15995001 chr2L_15995001 RAL-21 370 chr2L 16008672 16008722 chr2L 16008770 16008819 9 98 4.0 0.5 2.2 2.8 147 chr2L 16008672 intron beat-Ic + chr2L 16008746 intron beat-Ic + chr2L 16008819 intron beat-Ic + chr2L_9_16005001 chr2L_16005001 RAL-21 371 chr2L 16027373 16027424 chr2L 16027469 16027520 20 96 6.0 4.0 5.0 3.3 147 chr2L 16027373 intron beat-Ic + chr2L 16027446 intron beat-Ic + chr2L 16027520 intron beat-Ic + chr2L_20_16025001 chr2L_16025001 RAL-21 372 chr2L 16026158 16026186 chr2L 16027898 16027926 7 1741 18.0 15.5 16.8 0.4 1768 chr2L 16026158 intron beat-Ic + chr2L 16027042 intron beat-Ic + chr2L 16027926 intron beat-Ic + chr2L_7_16025001 chr2L_16025001 RAL-21 373 chr2L 16091614 16091654 chr2L 16091718 16091734 4 98 3.0 0.5 1.8 1.4 120 chr2L 16091614 intergenic not near genes chr2L 16091674 intergenic not near genes chr2L 16091734 intergenic not near genes chr2L_4_16090001 chr2L_16090001 RAL-21 374 chr2L 16141169 16141194 chr2L 16146396 16146421 copia 7 5227 0.5 5.0 2.8 1.8 5252 chr2L 16141169 intergenic not near genes chr2L 16143795 intergenic not near genes chr2L 16146421 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-21 375 chr2L 16217337 16217342 chr2L 16217403 16217441 6 88 2.0 1.5 1.8 2.1 104 chr2L 16217337 intergenic CR43840 - chr2L 16217389 intergenic CR43840 - chr2L 16217441 intergenic CR43840 - chr2L_6_16215001 chr2L_16215001 RAL-21 376 chr2L 16242066 16242085 chr2L 16242178 16242197 6 111 5.0 0.5 2.8 1.6 131 chr2L 16242066 5` UTR CG42818 + chr2L 16242132 exon CG42818 + chr2L 16242197 exon CG42818 + chr2L_6_16240001 chr2L_16240001 RAL-21 377 chr2L 16363921 16363965 chr2L 16364187 16364231 12 266 2.0 2.5 2.2 3.8 310 chr2L 16363921 intergenic not near genes chr2L 16364076 intergenic not near genes chr2L 16364231 intergenic not near genes chr2L_12_16360001 chr2L_16360001 RAL-21 378 chr2L 16384769 16384796 chr2L 16384866 16384890 5 96 2.0 0.0 1.0 2.5 121 chr2L 16384769 intergenic not near genes chr2L 16384830 intergenic not near genes chr2L 16384890 intergenic not near genes chr2L_5_16380001 chr2L_16380001 RAL-21 379 chr2L 16408099 16408105 chr2L 16408226 16408231 5 127 0.0 1.0 0.5 3.3 132 chr2L 16408099 intron CG5888 - chr2L 16408165 intron CG5888 - chr2L 16408231 intron CG5888 - chr2L_5_16405001 chr2L_16405001 RAL-21 380 chr2L 16434086 16434130 chr2L 16434188 16434232 18 102 4.0 2.5 3.2 4.3 146 chr2L 16434086 intron CG5888 - chr2L 16434159 intron CG5888 - chr2L 16434232 intron CG5888 - chr2L_18_16430001 chr2L_16430001 RAL-21 381 chr2L 16507953 16507959 chr2L 16508046 16508066 6 105 0.0 9.0 4.5 1.1 113 chr2L 16507953 intergenic CG5953 -,Tpr2 + chr2L 16508010 intergenic CG5953 -,Tpr2 + chr2L 16508066 intergenic CG5953 -,Tpr2 + chr2L_6_16505001 chr2L_16505001 RAL-21 382 chr2L 16511954 16511979 chr2L 16519181 16519206 HMS-Beagle 6 7226 4.5 12.0 8.2 0.7 7252 chr2L 16511954 intron CG5953 - chr2L 16515580 intron CG5953 - chr2L 16519206 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-21 383 chr2L 16561683 16561722 chr2L 16561794 16561827 5 108 4.5 3.0 3.8 1.0 144 chr2L 16561683 intron CG42389 + chr2L 16561755 intron CG42389 + chr2L 16561827 intron CG42389 + chr2L_5_16560001 chr2L_16560001 RAL-21 384 chr2L 16571592 16571645 chr2L 16571697 16571750 9 97 3.0 1.5 2.2 2.8 158 chr2L 16571592 intron CG42389 + chr2L 16571671 intron CG42389 + chr2L 16571750 intron CG42389 + chr2L_9_16570001 chr2L_16570001 RAL-21 385 chr2L 16589798 16589825 chr2L 16589908 16589935 11 110 2.0 5.5 3.8 2.3 137 chr2L 16589798 intron CG42389 + chr2L 16589866 intron CG42389 + chr2L 16589935 intron CG42389 + chr2L_11_16585001 chr2L_16585001 RAL-21 386 chr2L 16599994 16600016 chr2L 16600092 16600112 4 96 2.5 5.5 4.0 0.8 118 chr2L 16599994 intron CG42389 + chr2L 16600053 intron CG42389 + chr2L 16600112 intron CG42389 + chr2L_4_16600001 chr2L_16600001 RAL-21 387 chr2L 16610553 16610599 chr2L 16610663 16610709 11 106 2.5 2.0 2.2 3.4 156 chr2L 16610553 intron CG42389 + chr2L 16610631 intron CG42389 + chr2L 16610709 intron CG42389 + chr2L_11_16610001 chr2L_16610001 RAL-21 388 chr2L 16654682 16654710 chr2L 16654795 16654823 9 111 6.0 2.5 4.2 1.7 141 chr2L 16654682 intron CG42389 + chr2L 16654752 intron CG42389 + chr2L 16654823 intron CG42389 + chr2L_9_16650001 chr2L_16650001 RAL-21 389 chr2L 16670401 16670448 chr2L 16670498 16670545 12 95 2.5 6.0 4.2 2.3 144 chr2L 16670401 intron Trpgamma - chr2L 16670473 intron Trpgamma - chr2L 16670545 intron Trpgamma - chr2L_12_16670001 chr2L_16670001 RAL-21 390 chr2L 16697047 16697088 chr2L 16697216 16697258 8 169 4.5 0.0 2.2 2.5 211 chr2L 16697047 intron grp + chr2L 16697152 intron grp + chr2L 16697258 intron grp + chr2L_8_16695001 chr2L_16695001 RAL-21 391 chr2L 16791212 16791246 chr2L 16791318 16791352 9 106 3.0 2.5 2.8 2.4 140 chr2L 16791212 intergenic CG17928 +,Cyt-b5-r - chr2L 16791282 intergenic CG17928 + chr2L 16791352 intergenic CG17928 + chr2L_9_16790001 chr2L_16790001 RAL-21 392 chr2L 16796069 16796108 chr2L 16796184 16796229 8 116 0.0 3.5 1.8 2.9 160 chr2L 16796069 intergenic Ugt36Ba + chr2L 16796149 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796229 intergenic Ugt36Ba +,Ugt36Bb + chr2L_8_16795001 chr2L_16795001 RAL-21 393 chr2L 16818815 16818844 chr2L 16818911 16818938 9 96 0.0 0.0 0.0 9.0 123 chr2L 16818815 intron,intron CG13280 -,mdy + chr2L 16818876 intron,intron CG13280 -,mdy + chr2L 16818938 intron,intron CG13280 -,mdy + chr2L_9_16815001 chr2L_16815001 RAL-21 394 chr2L 16840991 16841042 chr2L 16841087 16841138 13 94 3.5 1.5 2.5 3.7 147 chr2L 16840991 intron,intron SclA +,SclB + chr2L 16841064 intron,intron SclA +,SclB + chr2L 16841138 intron,intron SclA +,SclB + chr2L_13_16840001 chr2L_16840001 RAL-21 395 chr2L 16850535 16850544 chr2L 16850652 16850661 6 116 4.5 6.5 5.5 0.9 126 chr2L 16850535 intron CG31810 - chr2L 16850598 intron CG31810 - chr2L 16850661 intron CG31810 - chr2L_6_16850001 chr2L_16850001 RAL-21 396 chr2L 16850546 16850562 chr2L 16850650 16850679 4 114 2.0 6.0 4.0 0.8 133 chr2L 16850546 intron CG31810 - chr2L 16850612 intron CG31810 - chr2L 16850679 intron CG31810 - chr2L_4_16850001 chr2L_16850001 RAL-21 397 chr2L 16867006 16867036 chr2L 16867121 16867151 8 115 1.5 4.0 2.8 2.1 145 chr2L 16867006 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867151 intergenic not near genes chr2L_8_16865001 chr2L_16865001 RAL-21 398 chr2L 16870092 16870143 chr2L 16870511 16870562 16 419 4.5 4.5 4.5 2.9 470 chr2L 16870092 5` UTR CR31781 + chr2L 16870327 5` UTR CR31781 + chr2L 16870562 5` UTR CR31781 + chr2L_16_16870001 chr2L_16870001 RAL-21 399 chr2L 16958087 16958134 chr2L 16962895 16962942 Doc 10 4808 3.5 4.0 3.8 2.1 4855 chr2L 16958087 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962942 intergenic not near genes chr2L_10_16960001 chr2L_16960001 RAL-21 400 chr2L 16968213 16968262 chr2L 16968323 16968372 9 110 0.5 3.5 2.0 3.0 159 chr2L 16968213 intergenic not near genes chr2L 16968292 intergenic not near genes chr2L 16968372 intergenic not near genes chr2L_9_16965001 chr2L_16965001 RAL-21 401 chr2L 16999005 16999029 chr2L 16999079 16999128 8 95 0.0 2.0 1.0 4.0 123 chr2L 16999005 intergenic CR45357 +,CR45356 + chr2L 16999066 intergenic CR45357 + chr2L 16999128 intergenic CR45357 + chr2L_8_16995001 chr2L_16995001 RAL-21 402 chr2L 17018696 17018738 chr2L 17018781 17018834 6 94 5.0 5.5 5.2 1.0 138 chr2L 17018696 intergenic not near genes chr2L 17018765 intergenic not near genes chr2L 17018834 intergenic not near genes chr2L_6_17015001 chr2L_17015001 RAL-21 403 chr2L 17032489 17032518 chr2L 17032587 17032623 6 102 4.5 1.5 3.0 1.5 134 chr2L 17032489 intergenic not near genes chr2L 17032556 intergenic not near genes chr2L 17032623 intergenic not near genes chr2L_6_17030001 chr2L_17030001 RAL-21 404 chr2L 17102992 17103034 chr2L 17103100 17103142 6 103 3.5 4.5 4.0 1.2 150 chr2L 17102992 intergenic not near genes chr2L 17103067 intergenic not near genes chr2L 17103142 intergenic not near genes chr2L_6_17100001 chr2L_17100001 RAL-21 405 chr2L 17141295 17141326 chr2L 17141392 17141436 8 106 0.5 3.0 1.8 2.9 141 chr2L 17141295 intron,intron CG34106 +,beat-IIIa + chr2L 17141366 intron,intron CG34106 +,beat-IIIa + chr2L 17141436 intron,intron CG34106 +,beat-IIIa + chr2L_8_17140001 chr2L_17140001 RAL-21 406 chr2L 17158710 17158750 chr2L 17158832 17158871 8 117 1.5 1.0 1.2 3.6 161 chr2L 17158710 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158790 intron,intron CG34106 +,beat-IIIa + chr2L 17158871 intron,intron CG34106 +,beat-IIIa + chr2L_8_17155001 chr2L_17155001 RAL-21 407 chr2L 17199149 17199188 chr2L 17200636 17200675 hobo 9 1487 3.0 6.5 4.8 1.6 1526 chr2L 17199149 intron beat-IIIc - chr2L 17199912 intron beat-IIIc - chr2L 17200675 intron beat-IIIc - chr2L_9_17195001 chr2L_17195001 RAL-21 408 chr2L 17208057 17208083 chr2L 17208157 17208179 4 105 2.5 4.5 3.5 0.9 122 chr2L 17208057 intron beat-IIIc - chr2L 17208118 intron beat-IIIc - chr2L 17208179 intron beat-IIIc - chr2L_4_17205001 chr2L_17205001 RAL-21 409 chr2L 17240546 17240596 chr2L 17240653 17240703 8 107 2.0 2.0 2.0 2.7 157 chr2L 17240546 intron beat-IIIc - chr2L 17240624 intron beat-IIIc - chr2L 17240703 intron beat-IIIc - chr2L_8_17240001 chr2L_17240001 RAL-21 410 chr2L 17243916 17243943 chr2L 17244142 17244171 10 228 2.0 4.0 3.0 2.5 255 chr2L 17243916 intron beat-IIIc - chr2L 17244044 intron beat-IIIc - chr2L 17244171 intron beat-IIIc - chr2L_10_17240001 chr2L_17240001 RAL-21 411 chr2L 17273179 17273228 chr2L 17277982 17277995 F-element 10 4796 2.0 4.0 3.0 2.5 4816 chr2L 17273179 intergenic not near genes chr2L 17275587 intergenic not near genes chr2L 17277995 intergenic not near genes chr2L_10_17275001 chr2L_17275001 RAL-21 412 chr2L 17351912 17351956 chr2L 17352033 17352078 7 122 1.5 2.0 1.8 2.5 166 chr2L 17351912 intergenic not near genes chr2L 17351995 intergenic not near genes chr2L 17352078 intergenic not near genes chr2L_7_17350001 chr2L_17350001 RAL-21 413 chr2L 17425751 17425791 chr2L 17425898 17425938 9 147 4.0 7.0 5.5 1.4 187 chr2L 17425751 intron Dif - chr2L 17425844 intron Dif - chr2L 17425938 intron Dif - chr2L_9_17425001 chr2L_17425001 RAL-21 414 chr2L 17432018 17432047 chr2L 17432145 17432174 1360 8 127 0.0 7.5 3.8 1.7 156 chr2L 17432018 intron Dif - chr2L 17432096 intron Dif - chr2L 17432174 intron Dif - chr2L_8_17430001 chr2L_17430001 RAL-21 415 chr2L 17491840 17491871 chr2L 17491943 17491956 4 92 6.0 3.0 4.5 0.7 116 chr2L 17491840 intron qua - chr2L 17491898 intron qua - chr2L 17491956 intron qua - chr2L_4_17490001 chr2L_17490001 RAL-21 416 chr2L 17543578 17543608 chr2L 17543691 17543721 8 110 2.5 1.5 2.0 2.7 143 chr2L 17543578 intergenic not near genes chr2L 17543650 intergenic not near genes chr2L 17543721 intergenic not near genes chr2L_8_17540001 chr2L_17540001 RAL-21 417 chr2L 17577713 17577729 chr2L 17577809 17577825 7 96 4.0 5.5 4.8 1.2 112 chr2L 17577713 intergenic not near genes chr2L 17577769 intergenic not near genes chr2L 17577825 intergenic not near genes chr2L_7_17575001 chr2L_17575001 RAL-21 418 chr2L 17637088 17637128 chr2L 17637185 17637224 9 96 1.0 2.5 1.8 3.2 136 chr2L 17637088 intergenic not near genes chr2L 17637156 intergenic not near genes chr2L 17637224 intergenic not near genes chr2L_9_17635001 chr2L_17635001 RAL-21 419 chr2L 17640513 17640552 chr2L 17640614 17640629 6 96 1.5 0.5 1.0 3.0 116 chr2L 17640513 intergenic not near genes chr2L 17640571 intergenic not near genes chr2L 17640629 intergenic not near genes chr2L_6_17640001 chr2L_17640001 RAL-21 420 chr2L 17723768 17723796 chr2L 17723881 17723909 11 112 1.0 5.0 3.0 2.8 141 chr2L 17723768 intron CadN - chr2L 17723838 intron CadN - chr2L 17723909 intron CadN - chr2L_11_17720001 chr2L_17720001 RAL-21 421 chr2L 17727742 17727778 chr2L 17729448 17729487 hobo 7 1704 3.5 0.0 1.8 2.5 1745 chr2L 17727742 intron CadN - chr2L 17728614 intron CadN - chr2L 17729487 intron CadN - chr2L_7_17725001 chr2L_17725001 RAL-21 422 chr2L 17790197 17790228 chr2L 17790300 17790331 7 103 3.0 1.0 2.0 2.3 134 chr2L 17790197 intron CadN2 - chr2L 17790264 intron CadN2 - chr2L 17790331 intron CadN2 - chr2L_7_17790001 chr2L_17790001 RAL-21 423 chr2L 17832916 17832954 chr2L 17833014 17833049 5 94 2.5 1.5 2.0 1.7 133 chr2L 17832916 intron CadN2 - chr2L 17832982 intron CadN2 - chr2L 17833049 intron CadN2 - chr2L_5_17830001 chr2L_17830001 RAL-21 424 chr2L 17951926 17951982 chr2L 17953413 17953429 hobo 19 1483 4.5 0.5 2.5 5.4 1503 chr2L 17951926 intergenic CR44398 -,CR44397 - chr2L 17952678 intergenic not near genes chr2L 17953429 intergenic not near genes chr2L_19_17950001 chr2L_17950001 RAL-21 425 chr2L 17989983 17990026 chr2L 17990067 17990122 18 87 3.5 6.0 4.8 3.1 139 chr2L 17989983 intergenic Prosbeta5R2 + chr2L 17990052 intergenic Prosbeta5R2 + chr2L 17990122 intergenic Prosbeta5R2 + chr2L_18_17990001 chr2L_17990001 RAL-21 426 chr2L 18103022 18103066 chr2L 18103129 18103173 7 99 1.5 1.5 1.5 2.8 151 chr2L 18103022 intergenic not near genes chr2L 18103098 intergenic not near genes chr2L 18103173 intergenic not near genes chr2L_7_18100001 chr2L_18100001 RAL-21 427 chr2L 18202464 18202507 chr2L 18202564 18202607 6 94 2.0 3.0 2.5 1.7 143 chr2L 18202464 intron CG42750 - chr2L 18202536 intron CG42750 - chr2L 18202607 intron CG42750 - chr2L_6_18200001 chr2L_18200001 RAL-21 428 chr2L 18364240 18364276 chr2L 18364360 18364396 12 120 4.0 1.5 2.8 3.2 156 chr2L 18364240 intron Fas3 + chr2L 18364318 intron Fas3 + chr2L 18364396 intron Fas3 + chr2L_12_18360001 chr2L_18360001 RAL-21 429 chr2L 18408010 18408027 chr2L 18412814 18412831 Doc 9 4803 9.5 4.5 7.0 1.1 4821 chr2L 18408010 intergenic not near genes chr2L 18410420 intergenic not near genes chr2L 18412831 intergenic not near genes chr2L_9_18410001 chr2L_18410001 RAL-21 430 chr2L 18408031 18408054 chr2L 18412809 18412853 Doc 12 4801 7.0 3.5 5.2 1.9 4822 chr2L 18408031 intergenic not near genes chr2L 18410442 intergenic not near genes chr2L 18412853 intergenic not near genes chr2L_12_18410001 chr2L_18410001 RAL-21 431 chr2L 18589531 18589572 chr2L 18594043 18594071 5 4502 31.5 7.0 19.2 0.2 4540 chr2L 18589531 intron Pde11 - chr2L 18591801 exon CG15160 + chr2L 18594071 exon CG15160 + chr2L_5_18590001 chr2L_18590001 RAL-21 432 chr2L 18811387 18811434 chr2L 18811489 18811536 7 102 2.0 0.0 1.0 3.5 149 chr2L 18811387 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811536 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-21 433 chr2L 18812536 18812582 chr2L 18812819 18812863 11 282 1.5 1.5 1.5 4.4 327 chr2L 18812536 intergenic CG17325 +,CG42305 + chr2L 18812700 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812863 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_11_18810001 chr2L_18810001 RAL-21 434 chr2L 18876844 18876880 chr2L 18876942 18876978 8 98 3.5 2.5 3.0 2.0 134 chr2L 18876844 intron tup - chr2L 18876911 intron tup - chr2L 18876978 intron tup - chr2L_8_18875001 chr2L_18875001 RAL-21 435 chr2L 18883839 18883883 chr2L 18883937 18883985 10 100 6.5 5.5 6.0 1.4 146 chr2L 18883839 intergenic not near genes chr2L 18883912 intergenic not near genes chr2L 18883985 intergenic not near genes chr2L_10_18880001 chr2L_18880001 RAL-21 436 chr2L 18898388 18898404 chr2L 18898490 18898506 7 101 4.5 0.0 2.2 2.2 118 chr2L 18898388 intergenic not near genes chr2L 18898447 intergenic not near genes chr2L 18898506 intergenic not near genes chr2L_7_18895001 chr2L_18895001 RAL-21 437 chr2L 18898406 18898424 chr2L 18898487 18898526 8 97 3.5 0.0 1.8 2.9 120 chr2L 18898406 intergenic not near genes chr2L 18898466 intergenic not near genes chr2L 18898526 intergenic not near genes chr2L_8_18895001 chr2L_18895001 RAL-21 438 chr2L 18902620 18902657 chr2L 18902921 18902958 18 301 5.0 7.5 6.2 2.5 338 chr2L 18902620 intergenic not near genes chr2L 18902789 intergenic not near genes chr2L 18902958 intergenic not near genes chr2L_18_18900001 chr2L_18900001 RAL-21 439 chr2L 18926569 18926593 chr2L 18926686 18926720 12 126 1.0 0.0 0.5 8.0 151 chr2L 18926569 intron ssp3 - chr2L 18926644 intron ssp3 - chr2L 18926720 intron ssp3 - chr2L_12_18925001 chr2L_18925001 RAL-21 440 chr2L 19122922 19122964 chr2L 19123089 19123131 6 167 2.0 2.0 2.0 2.0 209 chr2L 19122922 intron l(2)37Cc - chr2L 19123026 intron l(2)37Cc - chr2L 19123131 exon l(2)37Cc - chr2L_6_19120001 chr2L_19120001 RAL-21 441 chr2L 19147357 19147400 chr2L 19154407 19154455 297 8 7051 2.5 3.0 2.8 2.1 7098 chr2L 19147357 intron brat + chr2L 19150906 intron brat + chr2L 19154455 intron brat + chr2L_8_19150001 chr2L_19150001 RAL-21 442 chr2L 19178356 19178373 chr2L 19178471 19178473 7 113 6.0 7.5 6.8 0.9 117 chr2L 19178356 3` UTR brat + chr2L 19178414 3` UTR brat + chr2L 19178473 3` UTR brat + chr2L_7_19175001 chr2L_19175001 RAL-21 443 chr2L 19228438 19228471 chr2L 19229323 19229356 8 885 5.5 0.0 2.8 2.1 918 chr2L 19228438 intergenic not near genes chr2L 19228897 intergenic not near genes chr2L 19229356 intergenic not near genes chr2L_8_19225001 chr2L_19225001 RAL-21 444 chr2L 19246808 19246852 chr2L 19246908 19246952 10 100 4.5 3.0 3.8 2.1 144 chr2L 19246808 intergenic not near genes chr2L 19246880 intergenic not near genes chr2L 19246952 intergenic not near genes chr2L_10_19245001 chr2L_19245001 RAL-21 445 chr2L 19270917 19270926 chr2L 19271011 19271036 6 105 0.5 5.5 3.0 1.5 119 chr2L 19270917 intron CR44190 - chr2L 19270976 intron CR44190 - chr2L 19271036 intron CR44190 - chr2L_6_19270001 chr2L_19270001 RAL-21 446 chr2L 19345014 19345045 chr2L 19357225 19357253 blood 6 12222 1.0 2.5 1.8 2.1 12239 chr2L 19345014 intron dnt - chr2L 19351134 intron dnt - chr2L 19357253 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-21 447 chr2L 19357527 19357569 chr2L 19357636 19357670 13 107 2.5 6.0 4.2 2.5 143 chr2L 19357527 intron dnt - chr2L 19357598 intron dnt - chr2L 19357670 intron dnt - chr2L_13_19355001 chr2L_19355001 RAL-21 448 chr2L 19405598 19405616 chr2L 19405708 19405711 8 106 6.5 0.0 3.2 1.9 113 chr2L 19405598 intron Pax - chr2L 19405654 intron Pax - chr2L 19405711 intron Pax - chr2L_8_19405001 chr2L_19405001 RAL-21 449 chr2L 19437505 19437526 chr2L 19437617 19437638 7 112 2.5 1.0 1.8 2.5 133 chr2L 19437505 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437638 intron CG10237 - chr2L_7_19435001 chr2L_19435001 RAL-21 450 chr2L 19466829 19466835 chr2L 19466913 19466934 6 96 5.5 5.0 5.2 1.0 105 chr2L 19466829 3` UTR tj + chr2L 19466882 3` UTR tj + chr2L 19466934 3` UTR tj + chr2L_6_19465001 chr2L_19465001 RAL-21 451 chr2L 19597256 19597302 chr2L 19597509 19597549 10 246 2.5 5.0 3.8 2.1 293 chr2L 19597256 intron Lar + chr2L 19597402 intron Lar + chr2L 19597549 intron Lar + chr2L_10_19595001 chr2L_19595001 RAL-21 452 chr2L 19605507 19605558 chr2L 19605601 19605653 4 82 1.0 1.0 1.0 2.0 146 chr2L 19605507 intron Lar + chr2L 19605580 intron Lar + chr2L 19605653 intron Lar + chr2L_4_19605001 chr2L_19605001 RAL-21 453 chr2L 19620076 19620126 chr2L 19621085 19621105 jockey 9 1001 2.5 4.5 3.5 2.0 1029 chr2L 19620076 intron Lar + chr2L 19620590 intron Lar + chr2L 19621105 intron Lar + chr2L_9_19620001 chr2L_19620001 RAL-21 454 chr2L 19652553 19652601 chr2L 19674007 19674055 opus 15 21454 6.5 4.0 5.2 2.4 21502 chr2L 19652553 intron Lar + chr2L 19663304 intron Lar + chr2L 19674055 intron Lar + chr2L_15_19660001 chr2L_19660001 RAL-21 455 chr2L 19703528 19703568 chr2L 19712684 19712695 roo 13 9154 2.0 4.5 3.2 3.1 9167 chr2L 19703528 intron Lar + chr2L 19708112 intron Lar + chr2L 19712695 intron Lar + chr2L_13_19705001 chr2L_19705001 RAL-21 456 chr2L 19762821 19762834 chr2L 19763083 19763096 pogo 7 262 2.5 9.5 6.0 1.0 275 chr2L 19762821 intron fbp - chr2L 19762958 intron fbp - chr2L 19763096 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-21 457 chr2L 19776639 19776657 chr2L 19776739 19776757 5 100 10.0 4.5 7.2 0.6 118 chr2L 19776639 3` UTR CdGAPr - chr2L 19776698 3` UTR CdGAPr - chr2L 19776757 3` UTR CdGAPr - chr2L_5_19775001 chr2L_19775001 RAL-21 458 chr2L 19821773 19821821 chr2L 19821870 19821915 9 96 3.5 1.0 2.2 2.8 142 chr2L 19821773 intron sick + chr2L 19821844 intron sick + chr2L 19821915 intron sick + chr2L_9_19820001 chr2L_19820001 RAL-21 459 chr2L 19823245 19823296 chr2L 19823346 19823399 6 107 2.0 0.0 1.0 3.0 154 chr2L 19823245 intron sick + chr2L 19823322 intron sick + chr2L 19823399 intron sick + chr2L_6_19820001 chr2L_19820001 RAL-21 460 chr2L 19833436 19833477 chr2L 19839619 19839641 12 6181 2.0 3.0 2.5 3.4 6205 chr2L 19833436 intron sick + chr2L 19836538 intron sick + chr2L 19839641 intron sick + chr2L_12_19835001 chr2L_19835001 RAL-21 461 chr2L 19846983 19846991 chr2L 19847081 19847089 4 98 4.0 3.0 3.5 0.9 106 chr2L 19846983 intron sick + chr2L 19847036 intron sick + chr2L 19847089 intron sick + chr2L_4_19845001 chr2L_19845001 RAL-21 462 chr2L 19878966 19879017 chr2L 19879195 19879246 18 229 4.0 0.5 2.2 5.6 280 chr2L 19878966 intron sick + chr2L 19879106 intron sick + chr2L 19879246 intron sick + chr2L_18_19875001 chr2L_19875001 RAL-21 463 chr2L 19898953 19898990 chr2L 19899107 19899145 6 158 3.5 0.5 2.0 2.0 192 chr2L 19898953 intron sick + chr2L 19899049 intron sick + chr2L 19899145 intron sick + chr2L_6_19895001 chr2L_19895001 RAL-21 464 chr2L 19950203 19950205 chr2L 19950298 19950307 5 100 2.0 0.0 1.0 2.5 104 chr2L 19950203 intron sick + chr2L 19950255 intron sick + chr2L 19950307 intron sick + chr2L_5_19950001 chr2L_19950001 RAL-21 465 chr2L 20005855 20005899 chr2L 20010951 20010973 flea 12 5094 4.5 5.0 4.8 2.1 5118 chr2L 20005855 intron CG43861 - chr2L 20008414 intron CG43861 - chr2L 20010973 intron CG43861 - chr2L_12_20005001 chr2L_20005001 RAL-21 466 chr2L 20064223 20064241 chr2L 20064330 20064348 4 107 2.5 3.5 3.0 1.0 125 chr2L 20064223 3` UTR lok + chr2L 20064286 3` UTR,3` UTR lok +,vls - chr2L 20064348 3` UTR,3` UTR lok +,vls - chr2L_4_20060001 chr2L_20060001 RAL-21 467 chr2L 20069515 20069559 chr2L 20069615 20069639 11 94 2.0 5.5 3.8 2.3 124 chr2L 20069515 intron bwa + chr2L 20069577 intron bwa + chr2L 20069639 intron bwa + chr2L_11_20065001 chr2L_20065001 RAL-21 468 chr2L 20079504 20079530 chr2L 20079645 20079671 10 140 6.5 0.0 3.2 2.4 167 chr2L 20079504 intron,intron neb +,fok - chr2L 20079588 intron,intron neb +,fok - chr2L 20079671 intron,intron neb +,fok - chr2L_10_20075001 chr2L_20075001 RAL-21 469 chr2L 20079865 20079907 chr2L 20079995 20080045 18 139 8.5 4.5 6.5 2.4 180 chr2L 20079865 intron,intron neb +,fok - chr2L 20079955 intron,intron neb +,fok - chr2L 20080045 intron,intron neb +,fok - chr2L_18_20075001 chr2L_20075001 RAL-21 470 chr2L 20271254 20271259 chr2L 20271344 20271362 4 94 5.0 4.0 4.5 0.7 108 chr2L 20271254 intergenic not near genes chr2L 20271308 intergenic not near genes chr2L 20271362 intergenic not near genes chr2L_4_20270001 chr2L_20270001 RAL-21 471 chr2L 20272103 20272141 chr2L 20282833 20282872 copia 13 10729 6.5 6.0 6.2 1.8 10769 chr2L 20272103 intergenic not near genes chr2L 20277488 intergenic not near genes chr2L 20282872 intergenic not near genes chr2L_13_20275001 chr2L_20275001 RAL-21 472 chr2L 20296502 20296537 chr2L 20296603 20296638 12 99 0.0 6.0 3.0 3.0 136 chr2L 20296502 intergenic CR43414 - chr2L 20296570 intergenic CR43414 - chr2L 20296638 intergenic CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-21 473 chr2L 20299399 20299444 chr2L 20299541 20299587 9 141 0.0 4.0 2.0 3.0 188 chr2L 20299399 intergenic not near genes chr2L 20299493 intergenic not near genes chr2L 20299587 intergenic not near genes chr2L_9_20295001 chr2L_20295001 RAL-21 474 chr2L 20303171 20303184 chr2L 20310643 20310662 blood 4 7476 1.0 7.5 4.2 0.8 7491 chr2L 20303171 intergenic not near genes chr2L 20306916 intergenic not near genes chr2L 20310662 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-21 475 chr2L 20372205 20372255 chr2L 20372475 20372516 pogo 7 268 0.5 6.0 3.2 1.7 311 chr2L 20372205 intergenic Ugt37a1 - chr2L 20372360 intergenic Ugt37a1 - chr2L 20372516 exon Ugt37a1 - chr2L_7_20370001 chr2L_20370001 RAL-21 476 chr2L 20498668 20498708 chr2L 20498787 20498801 12 116 3.0 3.5 3.2 2.9 133 chr2L 20498668 intergenic not near genes chr2L 20498734 intergenic not near genes chr2L 20498801 intergenic not near genes chr2L_12_20495001 chr2L_20495001 RAL-21 477 chr2L 20568645 20568686 chr2L 20569050 20569088 X-element 10 406 2.0 1.5 1.8 3.6 443 chr2L 20568645 intron CR45347 + chr2L 20568866 intron CR45347 + chr2L 20569088 intron CR45347 + chr2L_10_20565001 chr2L_20565001 RAL-21 478 chr2L 20576217 20576248 chr2L 20583705 20583736 blood 5 7483 2.5 7.0 4.8 0.9 7519 chr2L 20576217 intergenic CR45347 + chr2L 20579976 intergenic not near genes chr2L 20583736 3` UTR CR44909 - chr2L_5_20575001 chr2L_20575001 RAL-21 479 chr2L 20597083 20597112 chr2L 20597176 20597209 4 94 0.0 2.5 1.2 1.8 126 chr2L 20597083 intron CR44909 - chr2L 20597146 intron CR44909 - chr2L 20597209 intron CR44909 - chr2L_4_20595001 chr2L_20595001 RAL-21 480 chr2L 20600652 20600697 chr2L 20600871 20600916 9 218 1.0 4.5 2.8 2.4 264 chr2L 20600652 intron CR44909 - chr2L 20600784 intron CR44909 - chr2L 20600916 intron CR44909 - chr2L_9_20600001 chr2L_20600001 RAL-21 481 chr2L 20630701 20630743 chr2L 20630999 20631038 4 290 1.5 3.5 2.5 1.1 337 chr2L 20630701 intergenic not near genes chr2L 20630870 intergenic not near genes chr2L 20631038 intergenic not near genes chr2L_4_20630001 chr2L_20630001 RAL-21 482 chr2L 20668671 20668717 chr2L 20668767 20668813 23 95 4.5 2.5 3.5 5.1 142 chr2L 20668671 intron CG31678 - chr2L 20668742 intron CG31678 - chr2L 20668813 intron CG31678 - chr2L_23_20665001 chr2L_20665001 RAL-21 483 chr2L 20674811 20674862 chr2L 20674916 20674960 6 101 2.5 1.0 1.8 2.1 149 chr2L 20674811 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674960 intron CG31678 - chr2L_6_20670001 chr2L_20670001 RAL-21 484 chr2L 20695775 20695828 chr2L 20695882 20695936 21 106 1.0 0.5 0.8 11.7 161 chr2L 20695775 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695936 intron Hr38 - chr2L_21_20695001 chr2L_20695001 RAL-21 485 chr2L 20793044 20793066 chr2L 20793208 20793230 10 163 0.0 6.0 3.0 2.5 186 chr2L 20793044 intron vari - chr2L 20793137 intron vari - chr2L 20793230 intron vari - chr2L_10_20790001 chr2L_20790001 RAL-21 486 chr2L 20835795 20835841 chr2L 20836532 20836578 Quasimodo 10 737 4.5 4.0 4.2 1.9 783 chr2L 20835795 5` UTR Oseg5 - chr2L 20836186 intergenic Oseg5 -,Spn38F - chr2L 20836578 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 RAL-21 487 chr2L 20891520 20891542 chr2L 20896641 20896660 jockey 11 5120 3.5 2.0 2.8 2.9 5140 chr2L 20891520 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896660 intron,intron CG43739 -,sky - chr2L_11_20890001 chr2L_20890001 RAL-21 488 chr2L 20947413 20947464 chr2L 20947512 20947550 11 98 2.5 1.5 2.0 3.7 137 chr2L 20947413 3` UTR CR44606 - chr2L 20947482 3` UTR CR44606 - chr2L 20947550 3` UTR CR44606 - chr2L_11_20945001 chr2L_20945001 RAL-21 489 chr2L 20976632 20976669 chr2L 20981467 20981498 X-element 12 4833 3.5 4.0 3.8 2.5 4866 chr2L 20976632 intron CG42238 - chr2L 20979065 intron CG42238 - chr2L 20981498 intron CG42238 - chr2L_12_20975001 chr2L_20975001 RAL-21 490 chr2L 21020261 21020286 chr2L 21023958 21023983 NOF 5 3697 4.0 3.0 3.5 1.1 3722 chr2L 21020261 intron CG42238 - chr2L 21022122 intron CG42238 - chr2L 21023983 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-21 491 chr2L 21041119 21041167 chr2L 21049400 21049417 Tirant 6 8276 3.0 1.0 2.0 2.0 8298 chr2L 21041119 intron CG42238 - chr2L 21045268 intron CG42238 - chr2L 21049417 intron CG42238 - chr2L_6_21045001 chr2L_21045001 RAL-21 492 chr2L 21119271 21119315 chr2L 21119375 21119419 17 103 2.0 8.0 5.0 2.8 148 chr2L 21119271 intron Nhe2 + chr2L 21119345 intron Nhe2 + chr2L 21119419 intron Nhe2 + chr2L_17_21115001 chr2L_21115001 RAL-21 493 chr2L 21152857 21152876 chr2L 21152972 21152991 4 112 6.5 5.0 5.8 0.6 134 chr2L 21152857 intergenic not near genes chr2L 21152924 intergenic not near genes chr2L 21152991 intergenic not near genes chr2L_4_21150001 chr2L_21150001 RAL-21 494 chr2L 21152877 21152899 chr2L 21152962 21152995 7 101 1.5 3.0 2.2 2.2 118 chr2L 21152877 intergenic not near genes chr2L 21152936 intergenic not near genes chr2L 21152995 intergenic not near genes chr2L_7_21150001 chr2L_21150001 RAL-21 495 chr2L 21246492 21246539 chr2L 21246604 21246654 14 109 1.5 5.5 3.5 3.1 162 chr2L 21246492 intron Hr39 + chr2L 21246573 intron Hr39 + chr2L 21246654 intron Hr39 + chr2L_14_21245001 chr2L_21245001 RAL-21 496 chr2L 21267009 21267035 chr2L 21267146 21267172 5 135 1.0 2.5 1.8 1.8 163 chr2L 21267009 intron CG8671 + chr2L 21267090 intron CG8671 + chr2L 21267172 intron CG8671 + chr2L_5_21265001 chr2L_21265001 RAL-21 497 chr2L 21286583 21286620 chr2L 21286682 21286719 14 99 7.5 2.0 4.8 2.4 136 chr2L 21286583 exon Mio - chr2L 21286651 intron Mio - chr2L 21286719 intron Mio - chr2L_14_21285001 chr2L_21285001 RAL-21 498 chr2L 21323405 21323436 chr2L 21323513 21323544 6 106 2.5 2.5 2.5 1.7 139 chr2L 21323405 intergenic not near genes chr2L 21323474 intergenic not near genes chr2L 21323544 intergenic not near genes chr2L_6_21320001 chr2L_21320001 RAL-21 499 chr2L 21333152 21333162 chr2L 21333269 21333277 6 117 2.5 3.0 2.8 1.6 125 chr2L 21333152 intron dimm + chr2L 21333214 intron dimm + chr2L 21333277 intron dimm + chr2L_6_21330001 chr2L_21330001 RAL-21 500 chr2L 21333613 21333646 chr2L 21333773 21333807 7 159 2.5 8.0 5.2 1.1 194 chr2L 21333613 intron dimm + chr2L 21333710 intron dimm + chr2L 21333807 intron dimm + chr2L_7_21330001 chr2L_21330001 RAL-21 501 chr2L 21347541 21347578 chr2L 21355033 21355070 blood 15 7492 4.0 6.0 5.0 2.5 7529 chr2L 21347541 intron Tsp39D + chr2L 21351306 intron Tsp39D + chr2L 21355070 intron Tsp39D + chr2L_15_21350001 chr2L_21350001 RAL-21 502 chr2L 21355586 21355638 chr2L 21355751 21355803 15 165 4.5 6.0 5.2 2.4 217 chr2L 21355586 exon Tsp39D + chr2L 21355694 intron Tsp39D + chr2L 21355803 intron Tsp39D + chr2L_15_21355001 chr2L_21355001 RAL-21 503 chr2L 21597023 21597063 chr2L 21604780 21604827 roo 9 7760 4.5 3.0 3.8 1.9 7804 chr2L 21597023 intergenic not near genes chr2L 21600925 intergenic not near genes chr2L 21604827 intergenic not near genes chr2L_9_21600001 chr2L_21600001 RAL-21 504 chr2L 21653177 21653217 chr2L 21656500 21656541 invader4 15 3322 4.5 2.5 3.5 3.3 3364 chr2L 21653177 intergenic not near genes chr2L 21654859 intergenic not near genes chr2L 21656541 intergenic not near genes chr2L_15_21650001 chr2L_21650001 RAL-21 505 chr2L 21684284 21684331 chr2L 21684566 21684614 16 283 3.5 5.0 4.2 3.1 330 chr2L 21684284 intron CG31619 + chr2L 21684449 intron CG31619 + chr2L 21684614 5` UTR CG31619 + chr2L_16_21680001 chr2L_21680001 RAL-21 506 chr2L 21685775 21685815 chr2L 21685871 21685911 16 95 1.0 6.5 3.8 3.3 136 chr2L 21685775 intron CG31619 + chr2L 21685843 intron CG31619 + chr2L 21685911 intron CG31619 + chr2L_16_21685001 chr2L_21685001 RAL-21 507 chr2L 21691817 21691860 chr2L 21698307 21698318 Burdock 6 6484 4.5 0.5 2.5 1.7 6501 chr2L 21691817 intron CG31619 + chr2L 21695068 intron CG31619 + chr2L 21698318 intron CG31619 + chr2L_6_21695001 chr2L_21695001 RAL-21 508 chr2L 21750089 21750132 chr2L 21750429 21750475 5 341 2.5 3.5 3.0 1.2 386 chr2L 21750089 intron step - chr2L 21750282 intron step - chr2L 21750475 intron step - chr2L_5_21750001 chr2L_21750001 RAL-21 509 chr2L 21754641 21754686 chr2L 21754742 21754787 13 101 2.0 10.0 6.0 1.9 146 chr2L 21754641 intron step - chr2L 21754714 intron step - chr2L 21754787 intron step - chr2L_13_21750001 chr2L_21750001 RAL-21 510 chr2L 21755483 21755523 chr2L 21755622 21755667 10 141 4.0 3.0 3.5 2.2 184 chr2L 21755483 intron step - chr2L 21755575 intron step - chr2L 21755667 intron step - chr2L_10_21755001 chr2L_21755001 RAL-21 511 chr2L 21819004 21819012 chr2L 21819119 21819127 4 115 7.5 5.0 6.2 0.6 123 chr2L 21819004 intergenic CR44786 + chr2L 21819066 intergenic CR44786 + chr2L 21819127 intergenic CR44786 + chr2L_4_21815001 chr2L_21815001 RAL-21 512 chr2L 21819021 21819028 chr2L 21819107 21819143 6 108 5.0 3.5 4.2 1.2 122 chr2L 21819021 intergenic CR44786 + chr2L 21819082 intergenic CR44786 + chr2L 21819143 intergenic CR44786 + chr2L_6_21815001 chr2L_21815001 RAL-21 513 chr2L 21855461 21855503 chr2L 21855567 21855606 6 106 2.5 1.0 1.8 2.1 145 chr2L 21855461 intron CR44917 + chr2L 21855534 intron CR44917 + chr2L 21855606 intron CR44917 + chr2L_6_21855001 chr2L_21855001 RAL-21 514 chr2L 21901399 21901430 chr2L 21901497 21901528 5 98 7.0 2.5 4.8 0.9 129 chr2L 21901399 intergenic not near genes chr2L 21901464 intergenic not near genes chr2L 21901528 intergenic not near genes chr2L_5_21900001 chr2L_21900001 RAL-21 515 chr2L 21946514 21946539 chr2L 21946700 21946725 7 186 1.5 4.0 2.8 1.8 211 chr2L 21946514 intergenic not near genes chr2L 21946620 intergenic not near genes chr2L 21946725 intergenic not near genes chr2L_7_21945001 chr2L_21945001 RAL-21 516 chr2L 21981676 21981698 chr2L 21990851 21990857 roo 5 9175 3.5 3.0 3.2 1.2 9181 chr2L 21981676 exon CG2528 - chr2L 21986266 intron CG2528 - chr2L 21990857 exon CG2528 - chr2L_5_21985001 chr2L_21985001 RAL-21 517 chr2L 22011921 22011946 chr2L 22012001 22012038 7 96 2.5 2.0 2.2 2.2 117 chr2L 22011921 intergenic not near genes chr2L 22011980 intergenic not near genes chr2L 22012038 intergenic not near genes chr2L_7_22010001 chr2L_22010001 RAL-21 518 chr2L 22077273 22077317 chr2L 22077374 22077418 9 101 1.5 3.0 2.2 2.8 145 chr2L 22077273 intergenic not near genes chr2L 22077346 intergenic not near genes chr2L 22077418 intergenic not near genes chr2L_9_22075001 chr2L_22075001 RAL-21 519 chr2L 22165497 22165542 chr2L 22165602 22165647 10 105 3.5 2.0 2.8 2.6 150 chr2L 22165497 3` UTR CG42748 + chr2L 22165572 3` UTR CG42748 + chr2L 22165647 3` UTR CG42748 + chr2L_10_22165001 chr2L_22165001 RAL-21 520 chr2L 22294340 22294374 chr2L 22294448 22294482 7 108 6.0 3.0 4.5 1.3 142 chr2L 22294340 intergenic not near genes chr2L 22294411 intergenic not near genes chr2L 22294482 intergenic not near genes chr2L_7_22290001 chr2L_22290001 RAL-21 521 chr2L 22541174 22541184 chr2L 22541274 22541284 5 100 4.5 7.0 5.8 0.7 110 chr2L 22541174 intron CG17490 + chr2L 22541229 intron CG17490 + chr2L 22541284 intron CG17490 + chr2L_5_22540001 chr2L_22540001 RAL-21 522 chr2L 22545960 22545997 chr2L 22546074 22546089 5 108 3.0 2.0 2.5 1.4 129 chr2L 22545960 intron CG17490 + chr2L 22546024 intron CG17490 + chr2L 22546089 intron CG17490 + chr2L_5_22545001 chr2L_22545001 RAL-21 523 chr2L 22581953 22581990 chr2L 22583762 22583799 S-element 9 1809 11.0 3.0 7.0 1.1 1846 chr2L 22581953 intron CG17494 + chr2L 22582876 intron CG17494 + chr2L 22583799 intron CG17494 + chr2L_9_22580001 chr2L_22580001 RAL-21 524 chr2L 22674047 22674079 chr2L 22674144 22674176 10 93 3.0 4.5 3.8 2.1 129 chr2L 22674047 intron CG40006 - chr2L 22674112 intron CG40006 - chr2L 22674176 intron CG40006 - chr2L_10_22670001 chr2L_22670001 RAL-21 525 chr2L 22676114 22676153 chr2L 22676372 22676411 11 258 4.0 5.0 4.5 2.0 297 chr2L 22676114 intron CG40006 - chr2L 22676262 intron CG40006 - chr2L 22676411 intron CG40006 - chr2L_11_22675001 chr2L_22675001 RAL-21 526 chr2L 22679804 22679820 chr2L 22684586 22684594 F-element 4 4778 6.0 6.0 6.0 0.6 4790 chr2L 22679804 intron CG40006 - chr2L 22682199 intron CG40006 - chr2L 22684594 intron CG40006 - chr2L_4_22680001 chr2L_22680001 RAL-21 527 chr2L 22693911 22693934 chr2L 22694009 22694041 5 101 1.5 1.0 1.2 2.3 130 chr2L 22693911 intron CG40006 - chr2L 22693976 intron CG40006 - chr2L 22694041 intron CG40006 - chr2L_5_22690001 chr2L_22690001 RAL-21 528 chr2L 22776404 22776451 chr2L 22778213 22778259 S-element 15 1807 3.5 5.0 4.2 2.9 1855 chr2L 22776404 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778259 intergenic not near genes chr2L_15_22775001 chr2L_22775001 RAL-21 529 chr2L 22983920 22983972 chr2L 22984016 22984063 9 89 1.5 2.0 1.8 3.2 143 chr2L 22983920 intron cta + chr2L 22983992 intron cta + chr2L 22984063 intron cta + chr2L_9_22980001 chr2L_22980001 RAL-21 530 chr2R 529318 529354 chr2R 537951 537966 Max-element 8 8634 3.5 2.5 3.0 2.0 8648 chr2R 529318 intron CG40378 + chr2R 533642 intron CG40378 + chr2R 537966 intron CG40378 + chr2R_8_530001 chr2R_530001 RAL-21 531 chr2R 1516585 1516603 chr2R 1521333 1521351 1731 7 4748 22.5 12.5 17.5 0.4 4766 chr2R 1516585 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_7_1515001 chr2R_1515001 RAL-21 532 chr2R 1732838 1732866 chr2R 1733005 1733033 7 167 2.5 2.5 2.5 2.0 195 chr2R 1732838 intron CG41520 + chr2R 1732936 intron CG41520 + chr2R 1733033 intron CG41520 + chr2R_7_1730001 chr2R_1730001 RAL-21 533 chr2R 2015118 2015164 chr2R 2015207 2015261 14 94 3.5 3.5 3.5 3.1 143 chr2R 2015118 intron CG17684 - chr2R 2015190 intron CG17684 - chr2R 2015261 intron CG17684 - chr2R_14_2015001 chr2R_2015001 RAL-21 534 chr2R 2498971 2499014 chr2R 2508138 2508181 roo 16 9163 4.0 5.0 4.5 2.9 9210 chr2R 2498971 intron MFS17 - chr2R 2503576 intron MFS17 - chr2R 2508181 intron MFS17 - chr2R_16_2500001 chr2R_2500001 RAL-21 535 chr2R 1373048 1373062 chr2R 2589326 2589340 Cr1a 4 1216279 14.5 21.0 17.8 0.2 1216292 chr2R 1373048 intron l(2)41Ab + chr2R 1981194 intron CG17684 - chr2R 2589340 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-21 536 chr2R 3532605 3532642 chr2R 3536068 3536105 Doc 6 3463 1.0 2.0 1.5 2.4 3500 chr2R 3532605 intergenic not near genes chr2R 3534355 intergenic not near genes chr2R 3536105 intergenic not near genes chr2R_6_3530001 chr2R_3530001 RAL-21 537 chr2R 3927671 3927719 chr2R 3927788 3927824 8 114 3.5 6.5 5.0 1.3 153 chr2R 3927671 intron uex - chr2R 3927748 intron uex - chr2R 3927824 intron uex - chr2R_8_3925001 chr2R_3925001 RAL-21 538 chr2R 4015297 4015341 chr2R 4015490 4015534 8 193 3.0 4.5 3.8 1.7 237 chr2R 4015297 intron Haspin + chr2R 4015416 intron Haspin + chr2R 4015534 intron Haspin + chr2R_8_4015001 chr2R_4015001 RAL-21 539 chr2R 4312934 4312986 chr2R 4313038 4313090 17 101 0.0 1.5 0.8 9.4 156 chr2R 4312934 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313090 intergenic not near genes chr2R_17_4310001 chr2R_4310001 RAL-21 540 chr2R 4350758 4350791 chr2R 4350847 4350891 11 98 4.0 3.5 3.8 2.3 133 chr2R 4350758 exon Gprk1 - chr2R 4350824 intron Gprk1 - chr2R 4350891 intron Gprk1 - chr2R_11_4350001 chr2R_4350001 RAL-21 541 chr2R 4688101 4688107 chr2R 4688214 4688220 4 113 4.5 4.5 4.5 0.7 119 chr2R 4688101 intergenic not near genes chr2R 4688160 intergenic not near genes chr2R 4688220 intergenic not near genes chr2R_4_4685001 chr2R_4685001 RAL-21 542 chr2R 4688109 4688129 chr2R 4688211 4688237 6 109 2.0 3.5 2.8 1.6 128 chr2R 4688109 intergenic not near genes chr2R 4688173 intergenic not near genes chr2R 4688237 intergenic not near genes chr2R_6_4685001 chr2R_4685001 RAL-21 543 chr2R 4783403 4783451 chr2R 4783501 4783549 7 97 2.5 3.0 2.8 1.8 146 chr2R 4783403 intergenic not near genes chr2R 4783476 intergenic not near genes chr2R 4783549 intergenic not near genes chr2R_7_4780001 chr2R_4780001 RAL-21 544 chr2R 5075205 5075241 chr2R 5075353 5075363 6 141 4.5 0.0 2.2 1.9 158 chr2R 5075205 intergenic not near genes chr2R 5075284 intergenic not near genes chr2R 5075363 intergenic not near genes chr2R_6_5075001 chr2R_5075001 RAL-21 545 chr2R 5075246 5075369 chr2R 5075757 5075775 13 459 0.0 5.0 2.5 3.7 529 chr2R 5075246 intergenic not near genes chr2R 5075510 intergenic not near genes chr2R 5075775 intergenic not near genes chr2R_13_5075001 chr2R_5075001 RAL-21 546 chr2R 5080806 5080818 chr2R 5080876 5080929 4 99 4.5 4.5 4.5 0.7 123 chr2R 5080806 intergenic not near genes chr2R 5080868 intergenic not near genes chr2R 5080929 intergenic not near genes chr2R_4_5080001 chr2R_5080001 RAL-21 547 chr2R 5237347 5237372 chr2R 5237433 5237464 4 94 2.0 0.5 1.2 1.8 117 chr2R 5237347 intron Nipped-A - chr2R 5237406 intron Nipped-A - chr2R 5237464 intron Nipped-A - chr2R_4_5235001 chr2R_5235001 RAL-21 548 chr2R 5255460 5255511 chr2R 5256732 5256767 11 1268 12.0 24.5 18.2 0.6 1307 chr2R 5255460 intergenic CR41443 + chr2R 5256114 intergenic not near genes chr2R 5256767 intergenic not near genes chr2R_11_5255001 chr2R_5255001 RAL-21 549 chr2R 5363473 5363515 chr2R 5363566 5363613 15 97 4.5 4.5 4.5 2.7 140 chr2R 5363473 5` UTR CR42646 + chr2R 5363543 intron CR42646 + chr2R 5363613 intron CR42646 + chr2R_15_5360001 chr2R_5360001 RAL-21 550 chr2R 5399131 5399171 chr2R 5399249 5399269 12 116 8.5 6.0 7.2 1.5 138 chr2R 5399131 intergenic not near genes chr2R 5399200 intergenic not near genes chr2R 5399269 intergenic not near genes chr2R_12_5395001 chr2R_5395001 RAL-21 551 chr2R 5417976 5417991 chr2R 5420628 5420643 Burdock 9 2651 13.0 7.5 10.2 0.8 2667 chr2R 5417976 intron laccase2 + chr2R 5419310 intron laccase2 + chr2R 5420643 intron laccase2 + chr2R_9_5415001 chr2R_5415001 RAL-21 552 chr2R 5417995 5418023 chr2R 5420624 5420675 Burdock 8 2649 7.5 6.5 7.0 1.0 2680 chr2R 5417995 intron laccase2 + chr2R 5419335 intron laccase2 + chr2R 5420675 intron laccase2 + chr2R_8_5415001 chr2R_5415001 RAL-21 553 chr2R 5472366 5472392 chr2R 5472475 5472506 4 109 1.5 5.0 3.2 1.0 140 chr2R 5472366 intron CG30440 - chr2R 5472436 intron CG30440 - chr2R 5472506 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-21 554 chr2R 5493410 5493458 chr2R 5493506 5493554 14 95 2.0 6.5 4.2 2.7 144 chr2R 5493410 intron CG30440 - chr2R 5493482 intron CG30440 - chr2R 5493554 intron CG30440 - chr2R_14_5490001 chr2R_5490001 RAL-21 555 chr2R 5603180 5603217 chr2R 5603276 5603303 8 98 4.0 1.0 2.5 2.3 123 chr2R 5603180 intergenic Fis1 - chr2R 5603242 intergenic Fis1 - chr2R 5603303 intergenic Fis1 - chr2R_8_5600001 chr2R_5600001 RAL-21 556 chr2R 5772508 5772548 chr2R 5772622 5772662 9 109 4.0 6.0 5.0 1.5 154 chr2R 5772508 3` UTR Gp210 + chr2R 5772585 3` UTR Gp210 + chr2R 5772662 3` UTR Gp210 + chr2R_9_5770001 chr2R_5770001 RAL-21 557 chr2R 5790442 5790490 chr2R 5790547 5790595 19 105 7.0 7.0 7.0 2.4 153 chr2R 5790442 intergenic not near genes chr2R 5790518 intergenic not near genes chr2R 5790595 intergenic not near genes chr2R_19_5790001 chr2R_5790001 RAL-21 558 chr2R 5810934 5810954 chr2R 5811134 5811154 4 199 4.5 2.0 3.2 1.0 220 chr2R 5810934 intron dpr12 + chr2R 5811044 intron dpr12 + chr2R 5811154 intron dpr12 + chr2R_4_5810001 chr2R_5810001 RAL-21 559 chr2R 5859968 5859998 chr2R 5860100 5860109 6 126 5.0 4.5 4.8 1.0 141 chr2R 5859968 3` UTR dpr12 + chr2R 5860038 3` UTR dpr12 + chr2R 5860109 3` UTR dpr12 + chr2R_6_5860001 chr2R_5860001 RAL-21 560 chr2R 5869255 5869304 chr2R 5874351 5874386 flea 16 5094 5.5 4.5 5.0 2.7 5131 chr2R 5869255 intergenic not near genes chr2R 5871820 intergenic not near genes chr2R 5874386 intergenic not near genes chr2R_16_5870001 chr2R_5870001 RAL-21 561 chr2R 5876851 5876898 chr2R 5876973 5877020 8 113 4.0 1.5 2.8 2.1 169 chr2R 5876851 intergenic not near genes chr2R 5876936 intergenic not near genes chr2R 5877020 intergenic not near genes chr2R_8_5875001 chr2R_5875001 RAL-21 562 chr2R 5878939 5878954 chr2R 5879029 5879054 7 96 2.0 7.5 4.8 1.2 115 chr2R 5878939 intergenic CG44438 - chr2R 5878996 intergenic CG44438 - chr2R 5879054 intergenic CG44438 - chr2R_7_5875001 chr2R_5875001 RAL-21 563 chr2R 5885348 5885375 chr2R 5885497 5885524 8 149 1.5 3.5 2.5 2.3 176 chr2R 5885348 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885524 5` UTR CR44125 + chr2R_8_5885001 chr2R_5885001 RAL-21 564 chr2R 5889689 5889704 chr2R 5889914 5889928 4 225 0.0 4.0 2.0 1.3 239 chr2R 5889689 intergenic not near genes chr2R 5889808 intergenic not near genes chr2R 5889928 intergenic not near genes chr2R_4_5885001 chr2R_5885001 RAL-21 565 chr2R 5902137 5902165 chr2R 5909716 5909744 17.6 6 7578 7.5 3.0 5.2 1.0 7607 chr2R 5902137 intron CG43366 + chr2R 5905940 intron CG43366 + chr2R 5909744 intron CG43366 + chr2R_6_5905001 chr2R_5905001 RAL-21 566 chr2R 5983000 5983044 chr2R 5983165 5983209 15 165 3.0 3.5 3.2 3.6 209 chr2R 5983000 intron Src42A + chr2R 5983104 intron Src42A + chr2R 5983209 intron Src42A + chr2R_15_5980001 chr2R_5980001 RAL-21 567 chr2R 6016767 6016812 chr2R 6016871 6016916 15 102 3.5 5.5 4.5 2.7 149 chr2R 6016767 intergenic not near genes chr2R 6016842 intergenic not near genes chr2R 6016916 intergenic not near genes chr2R_15_6015001 chr2R_6015001 RAL-21 568 chr2R 6033430 6033452 chr2R 6033534 6033557 7 102 3.5 1.5 2.5 2.0 127 chr2R 6033430 intron SCAP - chr2R 6033494 intron SCAP - chr2R 6033557 intron SCAP - chr2R_7_6030001 chr2R_6030001 RAL-21 569 chr2R 6033453 6033469 chr2R 6033531 6033574 7 94 2.0 0.5 1.2 3.2 121 chr2R 6033453 intron SCAP - chr2R 6033514 intron SCAP - chr2R 6033574 intron SCAP - chr2R_7_6030001 chr2R_6030001 RAL-21 570 chr2R 6088360 6088383 chr2R 6088473 6088496 7 112 6.5 12.0 9.2 0.7 136 chr2R 6088360 intergenic not near genes chr2R 6088428 intergenic not near genes chr2R 6088496 intergenic not near genes chr2R_7_6085001 chr2R_6085001 RAL-21 571 chr2R 6096707 6096750 chr2R 6101918 6101959 BS 5 5207 2.5 2.0 2.2 1.6 5252 chr2R 6096707 intron EcR - chr2R 6099333 intron EcR - chr2R 6101959 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-21 572 chr2R 6126920 6126960 chr2R 6127115 6127170 11 208 2.5 3.5 3.0 2.8 250 chr2R 6126920 intron EcR - chr2R 6127045 intron EcR - chr2R 6127170 intron EcR - chr2R_11_6125001 chr2R_6125001 RAL-21 573 chr2R 6168192 6168225 chr2R 6168294 6168327 9 102 3.5 4.0 3.8 1.9 135 chr2R 6168192 intron EcR - chr2R 6168260 intron EcR - chr2R 6168327 intron EcR - chr2R_9_6165001 chr2R_6165001 RAL-21 574 chr2R 6178101 6178143 chr2R 6178247 6178289 14 145 1.5 6.0 3.8 2.9 188 chr2R 6178101 intergenic not near genes chr2R 6178195 intergenic not near genes chr2R 6178289 intergenic not near genes chr2R_14_6175001 chr2R_6175001 RAL-21 575 chr2R 6500959 6500991 chr2R 6501057 6501088 12 107 7.5 5.0 6.2 1.7 129 chr2R 6500959 intergenic not near genes chr2R 6501024 intergenic not near genes chr2R 6501088 intergenic not near genes chr2R_12_6500001 chr2R_6500001 RAL-21 576 chr2R 6547933 6547959 chr2R 6548111 6548142 5 182 2.5 4.0 3.2 1.2 209 chr2R 6547933 intron jing + chr2R 6548038 intron jing + chr2R 6548142 intron jing + chr2R_5_6545001 chr2R_6545001 RAL-21 577 chr2R 6579757 6579763 chr2R 6584863 6584869 flea 6 5106 13.0 3.5 8.2 0.7 5112 chr2R 6579757 intron jing + chr2R 6582313 intron jing + chr2R 6584869 intron jing + chr2R_6_6580001 chr2R_6580001 RAL-21 578 chr2R 6579767 6579796 chr2R 6584857 6584902 flea 6 5103 8.5 3.0 5.8 0.9 5135 chr2R 6579767 intron jing + chr2R 6582334 intron jing + chr2R 6584902 intron jing + chr2R_6_6580001 chr2R_6580001 RAL-21 579 chr2R 6691103 6691157 chr2R 6691202 6691256 16 98 2.5 4.0 3.2 3.8 153 chr2R 6691103 intron CG9422 + chr2R 6691180 intron CG9422 + chr2R 6691256 intron CG9422 + chr2R_16_6690001 chr2R_6690001 RAL-21 580 chr2R 6696589 6696623 chr2R 6696692 6696714 10 101 4.5 2.0 3.2 2.4 125 chr2R 6696589 5` UTR Mob4 - chr2R 6696652 5` UTR Mob4 - chr2R 6696714 intergenic Rab2 +,Mob4 - chr2R_10_6695001 chr2R_6695001 RAL-21 581 chr2R 6699574 6699619 chr2R 6699679 6699724 14 105 3.5 2.0 2.8 3.7 150 chr2R 6699574 intergenic Rab2 + chr2R 6699649 intergenic Rab2 + chr2R 6699724 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_14_6695001 chr2R_6695001 RAL-21 582 chr2R 6895387 6895425 chr2R 6895486 6895516 4 92 1.0 2.0 1.5 1.6 129 chr2R 6895387 intron CG30158 + chr2R 6895452 intron CG30158 + chr2R 6895516 intron CG30158 + chr2R_4_6895001 chr2R_6895001 RAL-21 583 chr2R 6952156 6952184 chr2R 6959756 6959784 opus 6 7600 4.5 9.0 6.8 0.8 7628 chr2R 6952156 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955970 intron,intron mim -,CheB42c - chr2R 6959784 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 RAL-21 584 chr2R 7101611 7101648 chr2R 7101716 7101763 12 108 1.5 1.5 1.5 4.8 152 chr2R 7101611 intron esn + chr2R 7101687 intron esn + chr2R 7101763 intron esn + chr2R_12_7100001 chr2R_7100001 RAL-21 585 chr2R 7196557 7196591 chr2R 7201346 7201386 F-element 12 4794 6.5 3.5 5.0 2.0 4829 chr2R 7196557 intron pk + chr2R 7198972 intron pk + chr2R 7201386 intron pk + chr2R_12_7195001 chr2R_7195001 RAL-21 586 chr2R 7209848 7209872 chr2R 7217616 7217640 roo 15 7767 6.0 13.5 9.8 1.4 7792 chr2R 7209848 intron pk + chr2R 7213744 intron pk + chr2R 7217640 intron pk + chr2R_15_7210001 chr2R_7210001 RAL-21 587 chr2R 7235804 7235836 chr2R 7240916 7240933 jockey 7 5109 4.5 2.5 3.5 1.6 5129 chr2R 7235804 intergenic not near genes chr2R 7238368 intergenic not near genes chr2R 7240933 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-21 588 chr2R 7242570 7242619 chr2R 7242692 7242724 5 108 2.0 0.5 1.2 2.3 154 chr2R 7242570 intergenic Ady43A - chr2R 7242647 intergenic Ady43A - chr2R 7242724 intergenic Ady43A - chr2R_5_7240001 chr2R_7240001 RAL-21 589 chr2R 7262180 7262219 chr2R 7269261 7269275 297 4 7070 2.5 5.0 3.8 0.8 7095 chr2R 7262180 intergenic not near genes chr2R 7265728 intergenic not near genes chr2R 7269275 intergenic not near genes chr2R_4_7265001 chr2R_7265001 RAL-21 590 chr2R 7417900 7418167 chr2R 7418006 7418261 15 99 7.0 11.0 9.0 1.5 361 chr2R 7417900 intergenic not near genes chr2R 7418080 intergenic not near genes chr2R 7418261 intergenic not near genes chr2R_15_7415001 chr2R_7415001 RAL-21 591 chr2R 7434892 7434916 chr2R 7439213 7439235 Juan 11 4321 4.5 5.0 4.8 1.9 4343 chr2R 7434892 intergenic so + chr2R 7437064 intergenic not near genes chr2R 7439235 intergenic not near genes chr2R_11_7435001 chr2R_7435001 RAL-21 592 chr2R 7493993 7494031 chr2R 7494093 7494131 18 100 3.5 5.5 4.5 3.3 138 chr2R 7493993 3` UTR CG1620 - chr2R 7494062 3` UTR CG1620 - chr2R 7494131 3` UTR CG1620 - chr2R_18_7490001 chr2R_7490001 RAL-21 593 chr2R 7608389 7608432 chr2R 7613612 7613655 I-element 8 5220 7.5 7.0 7.2 1.0 5266 chr2R 7608389 intron CG1358 - chr2R 7611022 intron CG1358 - chr2R 7613655 intron CG1358 - chr2R_8_7610001 chr2R_7610001 RAL-21 594 chr2R 7642848 7642892 chr2R 7642948 7642991 17 99 2.0 5.5 3.8 3.5 143 chr2R 7642848 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642991 intron CG43340 + chr2R_17_7640001 chr2R_7640001 RAL-21 595 chr2R 7815651 7815701 chr2R 7822140 7822169 Burdock 12 6485 5.0 3.5 4.2 2.3 6518 chr2R 7815651 intergenic CG1882 + chr2R 7818910 intergenic not near genes chr2R 7822169 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-21 596 chr2R 7862210 7862251 chr2R 7867346 7867383 flea 8 5132 1.5 3.5 2.5 2.3 5173 chr2R 7862210 intron Dgk - chr2R 7864796 intron Dgk - chr2R 7867383 intron Dgk - chr2R_8_7860001 chr2R_7860001 RAL-21 597 chr2R 7869176 7869210 chr2R 7873979 7874012 Doc 5 4801 8.0 1.5 4.8 0.9 4836 chr2R 7869176 intron Dgk - chr2R 7871594 intron Dgk - chr2R 7874012 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-21 598 chr2R 7942913 7942961 chr2R 7943187 7943221 10 274 4.5 5.0 4.8 1.7 308 chr2R 7942913 intron CG14764 - chr2R 7943067 intron CG14764 - chr2R 7943221 intron CG14764 - chr2R_10_7940001 chr2R_7940001 RAL-21 599 chr2R 8157891 8157902 chr2R 8157987 8158007 4 100 3.5 4.5 4.0 0.8 116 chr2R 8157891 5` UTR CR44068 + chr2R 8157949 5` UTR CR44068 + chr2R 8158007 5` UTR CR44068 + chr2R_4_8155001 chr2R_8155001 RAL-21 600 chr2R 8236024 8236056 chr2R 8236125 8236156 5 100 3.0 4.5 3.8 1.0 132 chr2R 8236024 intergenic not near genes chr2R 8236090 intergenic not near genes chr2R 8236156 intergenic not near genes chr2R_5_8235001 chr2R_8235001 RAL-21 601 chr2R 8330843 8330887 chr2R 8331349 8331393 roo 10 506 2.5 2.0 2.2 3.1 550 chr2R 8330843 intron pdm3 + chr2R 8331118 intron pdm3 + chr2R 8331393 intron pdm3 + chr2R_10_8330001 chr2R_8330001 RAL-21 602 chr2R 8398216 8398226 chr2R 8403002 8403027 Doc 4 4794 1.5 1.0 1.2 1.8 4811 chr2R 8398216 intron CG2121 - chr2R 8400622 intron CG2121 - chr2R 8403027 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-21 603 chr2R 8518783 8518796 chr2R 12066272 12066285 4 3547489 18.5 0.5 9.5 0.4 3547502 chr2R 8518783 intron mtt - chr2R 10292534 intron CAP + chr2R 12066285 intron CG8888 - chr2R_4_10290001 chr2R_10290001 RAL-21 604 chr2R 8525084 8525101 chr2R 8525181 8525198 4 97 0.0 1.0 0.5 2.7 114 chr2R 8525084 intron mtt - chr2R 8525141 intron mtt - chr2R 8525198 intron mtt - chr2R_4_8525001 chr2R_8525001 RAL-21 605 chr2R 8554111 8554128 chr2R 8554210 8554231 4 101 7.0 2.5 4.8 0.7 120 chr2R 8554111 intergenic not near genes chr2R 8554171 intergenic not near genes chr2R 8554231 intergenic not near genes chr2R_4_8550001 chr2R_8550001 RAL-21 606 chr2R 8566041 8566067 chr2R 8567007 8567033 1360 6 966 6.0 5.5 5.8 0.9 992 chr2R 8566041 5` UTR Cyp6a14 - chr2R 8566537 5` UTR Cyp6a14 - chr2R 8567033 5` UTR Cyp6a14 - chr2R_6_8565001 chr2R_8565001 RAL-21 607 chr2R 8612560 8612610 chr2R 8612656 8612707 13 95 7.5 5.5 6.5 1.7 147 chr2R 8612560 intron CG8642 - chr2R 8612634 intron CG8642 - chr2R 8612707 intron CG8642 - chr2R_13_8610001 chr2R_8610001 RAL-21 608 chr2R 8722747 8722776 chr2R 8723008 8723035 pogo 8 259 4.0 4.5 4.2 1.5 288 chr2R 8722747 intron CG14767 - chr2R 8722891 intron CG14767 - chr2R 8723035 intron CG14767 - chr2R_8_8720001 chr2R_8720001 RAL-21 609 chr2R 8777926 8777944 chr2R 8784132 8784168 diver 8 6218 2.0 6.5 4.2 1.5 6242 chr2R 8777926 intergenic not near genes chr2R 8781047 intergenic not near genes chr2R 8784168 intergenic not near genes chr2R_8_8780001 chr2R_8780001 RAL-21 610 chr2R 8827746 8827776 chr2R 8827842 8827858 10 95 5.5 5.0 5.2 1.6 112 chr2R 8827746 intron,3` UTR sns +,CG30350 + chr2R 8827802 intron sns + chr2R 8827858 intron sns + chr2R_10_8825001 chr2R_8825001 RAL-21 611 chr2R 8849212 8849259 chr2R 8849310 8849357 18 97 5.0 4.0 4.5 3.3 145 chr2R 8849212 intron sns + chr2R 8849284 intron sns + chr2R 8849357 intron sns + chr2R_18_8845001 chr2R_8845001 RAL-21 612 chr2R 8967408 8967703 chr2R 8967575 8967840 19 162 2.0 5.5 3.8 4.0 432 chr2R 8967408 intron CG8216 - chr2R 8967624 intron CG8216 - chr2R 8967840 intron CG8216 - chr2R_19_8965001 chr2R_8965001 RAL-21 613 chr2R 9016945 9016967 chr2R 9017050 9017073 5 106 3.5 4.5 4.0 1.0 128 chr2R 9016945 5` UTR CG13744 - chr2R 9017009 5` UTR CG13744 - chr2R 9017073 5` UTR CG13744 - chr2R_5_9015001 chr2R_9015001 RAL-21 614 chr2R 9151281 9151332 chr2R 9157771 9157822 Burdock 20 6488 2.5 3.5 3.0 5.0 6541 chr2R 9151281 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157822 intergenic CG8008 - chr2R_20_9150001 chr2R_9150001 RAL-21 615 chr2R 9212686 9212699 chr2R 9213180 9213205 roo 5 502 4.5 3.5 4.0 1.0 519 chr2R 9212686 intergenic CR45309 + chr2R 9212946 intergenic CR45309 + chr2R 9213205 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-21 616 chr2R 9227864 9227900 chr2R 9227956 9228007 10 100 3.5 1.5 2.5 2.9 143 chr2R 9227864 3` UTR hig - chr2R 9227936 3` UTR hig - chr2R 9228007 3` UTR hig - chr2R_10_9225001 chr2R_9225001 RAL-21 617 chr2R 9267961 9268011 chr2R 9268067 9268107 11 105 4.0 0.5 2.2 3.4 146 chr2R 9267961 exon Pkn - chr2R 9268034 intron Pkn - chr2R 9268107 intron Pkn - chr2R_11_9265001 chr2R_9265001 RAL-21 618 chr2R 9331302 9331323 chr2R 9331402 9331423 6 100 1.0 3.5 2.2 1.9 121 chr2R 9331302 intron,intron CG13739 -,CG13954 - chr2R 9331362 intron,intron CG13739 -,CG13954 - chr2R 9331423 intron,intron CG13739 -,CG13954 - chr2R_6_9330001 chr2R_9330001 RAL-21 619 chr2R 9331324 9331340 chr2R 9331400 9331422 5 89 0.5 3.5 2.0 1.7 98 chr2R 9331324 intron,intron CG13739 -,CG13954 - chr2R 9331373 intron,intron CG13739 -,CG13954 - chr2R 9331422 intron,intron CG13739 -,CG13954 - chr2R_5_9330001 chr2R_9330001 RAL-21 620 chr2R 9480059 9480109 chr2R 9490610 9490649 roo 18 10549 5.0 5.0 5.0 3.0 10590 chr2R 9480059 intergenic not near genes chr2R 9485354 intergenic not near genes chr2R 9490649 intergenic not near genes chr2R_18_9485001 chr2R_9485001 RAL-21 621 chr2R 9561825 9561850 chr2R 9561932 9561958 6 105 0.0 0.0 0.0 6.0 133 chr2R 9561825 3` UTR,intron CR45281 -,CG1809 + chr2R 9561892 3` UTR,intron CR45281 -,CG1809 + chr2R 9561958 3` UTR,intron CR45281 -,CG1809 + chr2R_6_9560001 chr2R_9560001 RAL-21 622 chr2R 9726597 9726638 chr2R 9734168 9734209 17.6 18 7571 3.0 7.0 5.0 3.0 7612 chr2R 9726597 intron sqa - chr2R 9730403 intron sqa - chr2R 9734209 intron sqa - chr2R_18_9730001 chr2R_9730001 RAL-21 623 chr2R 9871040 9871064 chr2R 9871524 9871570 roo 4 500 3.5 2.0 2.8 1.1 530 chr2R 9871040 intron cbx - chr2R 9871305 intron cbx - chr2R 9871570 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-21 624 chr2R 9896804 9896844 chr2R 9896952 9896966 13 142 3.5 2.5 3.0 3.2 162 chr2R 9896804 exon CG30007 + chr2R 9896885 exon CG30007 + chr2R 9896966 exon CG30007 + chr2R_13_9895001 chr2R_9895001 RAL-21 625 chr2R 9928404 9928421 chr2R 9928549 9928566 5 144 9.5 4.0 6.8 0.6 162 chr2R 9928404 intron Mef2 - chr2R 9928485 intron Mef2 - chr2R 9928566 intron Mef2 - chr2R_5_9925001 chr2R_9925001 RAL-21 626 chr2R 9928422 9928452 chr2R 9928546 9928597 12 138 3.0 2.5 2.8 3.2 175 chr2R 9928422 intron Mef2 - chr2R 9928510 intron Mef2 - chr2R 9928597 intron Mef2 - chr2R_12_9925001 chr2R_9925001 RAL-21 627 chr2R 9935006 9935059 chr2R 9935107 9935161 10 102 3.0 3.0 3.0 2.5 155 chr2R 9935006 intron Mef2 - chr2R 9935084 intron Mef2 - chr2R 9935161 intron Mef2 - chr2R_10_9935001 chr2R_9935001 RAL-21 628 chr2R 9945448 9945457 chr2R 9945625 9945673 BS 4 198 3.5 4.5 4.0 0.8 225 chr2R 9945448 intron Mef2 - chr2R 9945560 intron Mef2 - chr2R 9945673 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-21 629 chr2R 9948379 9948404 chr2R 9948463 9948465 4 78 1.0 2.0 1.5 1.6 86 chr2R 9948379 intron Mef2 - chr2R 9948422 intron Mef2 - chr2R 9948465 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-21 630 chr2R 9956052 9956075 chr2R 9956149 9956172 11 97 10.0 6.5 8.2 1.2 120 chr2R 9956052 intron Mef2 - chr2R 9956112 intron Mef2 - chr2R 9956172 intron Mef2 - chr2R_11_9955001 chr2R_9955001 RAL-21 631 chr2R 9956076 9956094 chr2R 9956144 9956191 8 91 8.5 5.5 7.0 1.0 115 chr2R 9956076 intron Mef2 - chr2R 9956134 intron Mef2 - chr2R 9956191 intron Mef2 - chr2R_8_9955001 chr2R_9955001 RAL-21 632 chr2R 10004571 10004618 chr2R 10004690 10004737 6 112 1.5 2.5 2.0 2.0 166 chr2R 10004571 intron Pka-R2 - chr2R 10004654 intron Pka-R2 - chr2R 10004737 intron Pka-R2 - chr2R_6_10000001 chr2R_10000001 RAL-21 633 chr2R 10005835 10005873 chr2R 10007014 10007052 1360 8 1177 4.5 1.5 3.0 2.0 1217 chr2R 10005835 intron Pka-R2 - chr2R 10006444 intron Pka-R2 - chr2R 10007052 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-21 634 chr2R 10047802 10047828 chr2R 10047905 10047931 10 102 3.0 4.0 3.5 2.2 129 chr2R 10047802 intron oys - chr2R 10047866 intron oys - chr2R 10047931 intron oys - chr2R_10_10045001 chr2R_10045001 RAL-21 635 chr2R 10088662 10088715 chr2R 10088834 10088887 14 171 1.0 4.5 2.8 3.7 225 chr2R 10088662 intron CG2269 + chr2R 10088774 intron CG2269 + chr2R 10088887 intron CG2269 + chr2R_14_10085001 chr2R_10085001 RAL-21 636 chr2R 10122729 10122742 chr2R 10122959 10122972 5 229 9.5 5.5 7.5 0.6 243 chr2R 10122729 intergenic Ccs - chr2R 10122850 intergenic Ccs - chr2R 10122972 intergenic Ccs - chr2R_5_10120001 chr2R_10120001 RAL-21 637 chr2R 10122745 10122749 chr2R 10122958 10122973 4 224 7.5 5.5 6.5 0.5 228 chr2R 10122745 intergenic Ccs - chr2R 10122859 intergenic Ccs - chr2R 10122973 intergenic Ccs - chr2R_4_10120001 chr2R_10120001 RAL-21 638 chr2R 10132170 10132211 chr2R 10132270 10132311 7 98 2.0 2.0 2.0 2.3 141 chr2R 10132170 intron gem + chr2R 10132240 intron gem + chr2R 10132311 exon gem + chr2R_7_10130001 chr2R_10130001 RAL-21 639 chr2R 10147628 10147673 chr2R 10147731 10147776 9 103 2.5 5.0 3.8 1.9 148 chr2R 10147628 intron KCNQ - chr2R 10147702 intron KCNQ - chr2R 10147776 intron KCNQ - chr2R_9_10145001 chr2R_10145001 RAL-21 640 chr2R 10169523 10169560 chr2R 10169618 10169660 4 90 3.0 1.0 2.0 1.3 137 chr2R 10169523 intron KCNQ - chr2R 10169592 intron KCNQ - chr2R 10169660 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-21 641 chr2R 10176865 10176910 chr2R 10186051 10186097 roo 11 9187 3.5 2.5 3.0 2.8 9232 chr2R 10176865 intron KCNQ - chr2R 10181481 intron KCNQ - chr2R 10186097 intron KCNQ - chr2R_11_10180001 chr2R_10180001 RAL-21 642 chr2R 10186097 10186125 chr2R 10186193 10186221 6 95 2.0 4.5 3.2 1.4 124 chr2R 10186097 intron KCNQ - chr2R 10186159 intron KCNQ - chr2R 10186221 intron KCNQ - chr2R_6_10185001 chr2R_10185001 RAL-21 643 chr2R 10189993 10190017 chr2R 10190083 10190106 5 88 2.0 2.5 2.2 1.6 113 chr2R 10189993 intron KCNQ - chr2R 10190050 intron KCNQ - chr2R 10190106 intron KCNQ - chr2R_5_10190001 chr2R_10190001 RAL-21 644 chr2R 10225711 10225752 chr2R 10225813 10225824 12 99 1.5 3.0 2.2 3.8 113 chr2R 10225711 intron,intron CG12912 -,Hr46 - chr2R 10225768 intron,intron CG12912 -,Hr46 - chr2R 10225824 intron,intron CG12912 -,Hr46 - chr2R_12_10225001 chr2R_10225001 RAL-21 645 chr2R 10257175 10257193 chr2R 10257286 10257304 5 110 4.0 0.5 2.2 1.6 129 chr2R 10257175 intron CG12911 + chr2R 10257240 intron CG12911 + chr2R 10257304 intron CG12911 + chr2R_5_10255001 chr2R_10255001 RAL-21 646 chr2R 10274801 10274820 chr2R 10274898 10274912 5 96 7.0 0.0 3.5 1.1 111 chr2R 10274801 intron CAP + chr2R 10274856 intron CAP + chr2R 10274912 intron CAP + chr2R_5_10270001 chr2R_10270001 RAL-21 647 chr2R 10303510 10303515 chr2R 10303630 10303635 6 120 25.5 6.5 16.0 0.4 125 chr2R 10303510 intron CAP + chr2R 10303572 intron CAP + chr2R 10303635 intron CAP + chr2R_6_10300001 chr2R_10300001 RAL-21 648 chr2R 10303516 10303562 chr2R 10303628 10303682 33 117 8.5 5.5 7.0 4.1 166 chr2R 10303516 intron CAP + chr2R 10303599 intron CAP + chr2R 10303682 intron CAP + chr2R_33_10300001 chr2R_10300001 RAL-21 649 chr2R 10313306 10313353 chr2R 10313404 10313461 9 107 1.5 4.5 3.0 2.2 155 chr2R 10313306 intergenic not near genes chr2R 10313384 intergenic not near genes chr2R 10313461 intergenic Ndg + chr2R_9_10310001 chr2R_10310001 RAL-21 650 chr2R 10318497 10318540 chr2R 10318603 10318631 8 103 0.5 3.0 1.8 2.9 134 chr2R 10318497 intron Ndg + chr2R 10318564 intron Ndg + chr2R 10318631 intron Ndg + chr2R_8_10315001 chr2R_10315001 RAL-21 651 chr2R 10319697 10319741 chr2R 10319809 10319853 14 111 1.5 2.0 1.8 5.0 156 chr2R 10319697 intron Ndg + chr2R 10319775 intron Ndg + chr2R 10319853 intron,3` UTR Ndg +,CG34222 - chr2R_14_10315001 chr2R_10315001 RAL-21 652 chr2R 10352653 10352705 chr2R 10352750 10352802 12 96 4.0 2.5 3.2 2.9 149 chr2R 10352653 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352728 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352802 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_12_10350001 chr2R_10350001 RAL-21 653 chr2R 10370490 10370526 chr2R 10370653 10370689 10 160 1.5 1.0 1.2 4.5 199 chr2R 10370490 intron CG42732 - chr2R 10370590 intron CG42732 - chr2R 10370689 intron CG42732 - chr2R_10_10370001 chr2R_10370001 RAL-21 654 chr2R 10400405 10400422 chr2R 10400486 10400512 4 92 3.0 3.5 3.2 1.0 107 chr2R 10400405 intron CG42732 - chr2R 10400458 intron CG42732 - chr2R 10400512 intron CG42732 - chr2R_4_10400001 chr2R_10400001 RAL-21 655 chr2R 10409042 10409084 chr2R 10409139 10409180 4 96 0.0 4.5 2.2 1.2 138 chr2R 10409042 intron CG42732 - chr2R 10409111 intron CG42732 - chr2R 10409180 intron,exon CG42732 -,CG33477 - chr2R_4_10405001 chr2R_10405001 RAL-21 656 chr2R 10417430 10417449 chr2R 10417544 10417553 5 108 21.0 21.5 21.2 0.2 123 chr2R 10417430 intergenic CG42732 - chr2R 10417492 intergenic CG42732 - chr2R 10417553 intergenic not near genes chr2R_5_10415001 chr2R_10415001 RAL-21 657 chr2R 10454077 10454090 chr2R 10454174 10454187 8 96 13.0 4.5 8.8 0.8 110 chr2R 10454077 intron,intron Galphao +,Cyp49a1 - chr2R 10454132 intron,intron Galphao +,Cyp49a1 - chr2R 10454187 intron,intron Galphao +,Cyp49a1 - chr2R_8_10450001 chr2R_10450001 RAL-21 658 chr2R 10454093 10454129 chr2R 10454172 10454226 11 91 4.0 5.0 4.5 2.0 133 chr2R 10454093 intron,intron Galphao +,Cyp49a1 - chr2R 10454160 intron,intron Galphao +,Cyp49a1 - chr2R 10454226 intron,intron Galphao +,Cyp49a1 - chr2R_11_10450001 chr2R_10450001 RAL-21 659 chr2R 10469001 10469055 chr2R 10469147 10469201 15 142 1.0 1.5 1.2 6.8 200 chr2R 10469001 intron CG11777 + chr2R 10469101 intron CG11777 + chr2R 10469201 exon CG11777 + chr2R_15_10465001 chr2R_10465001 RAL-21 660 chr2R 10539207 10539240 chr2R 10539309 10539321 11 98 7.5 3.5 5.5 1.7 114 chr2R 10539207 intron lola - chr2R 10539264 intron lola - chr2R 10539321 intron lola - chr2R_11_10535001 chr2R_10535001 RAL-21 661 chr2R 10550335 10550367 chr2R 10550442 10550474 5 107 4.0 1.0 2.5 1.4 139 chr2R 10550335 intergenic not near genes chr2R 10550404 intergenic not near genes chr2R 10550474 intergenic not near genes chr2R_5_10550001 chr2R_10550001 RAL-21 662 chr2R 10563237 10563533 chr2R 10563355 10563632 5 112 10.0 7.5 8.8 0.5 395 chr2R 10563237 intron psq + chr2R 10563434 intron psq + chr2R 10563632 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-21 663 chr2R 10563558 10563580 chr2R 10563647 10563680 5 94 3.0 6.5 4.8 0.9 122 chr2R 10563558 intron psq + chr2R 10563619 intron psq + chr2R 10563680 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-21 664 chr2R 10563903 10563917 chr2R 10564114 10564124 5 209 0.0 1.0 0.5 3.3 221 chr2R 10563903 intron psq + chr2R 10564014 intron psq + chr2R 10564124 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-21 665 chr2R 10574625 10574647 chr2R 10574727 10574749 7 102 6.0 12.5 9.2 0.7 124 chr2R 10574625 intron psq + chr2R 10574687 intron psq + chr2R 10574749 intron psq + chr2R_7_10570001 chr2R_10570001 RAL-21 666 chr2R 10582095 10582132 chr2R 10582210 10582241 11 114 6.0 0.0 3.0 2.8 146 chr2R 10582095 intron psq + chr2R 10582168 intron psq + chr2R 10582241 intron psq + chr2R_11_10580001 chr2R_10580001 RAL-21 667 chr2R 10622335 10622360 chr2R 10637119 10637144 mdg1 5 14782 4.0 1.0 2.5 1.4 14809 chr2R 10622335 intron CG11883 + chr2R 10629740 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_5_10625001 chr2R_10625001 RAL-21 668 chr2R 10644040 10644089 chr2R 10644138 10644187 11 98 3.5 0.0 1.8 3.9 147 chr2R 10644040 intron Git - chr2R 10644114 intron Git - chr2R 10644187 intron Git - chr2R_11_10640001 chr2R_10640001 RAL-21 669 chr2R 10700471 10700516 chr2R 10700600 10700643 4 131 2.5 0.0 1.2 1.8 172 chr2R 10700471 intron stan + chr2R 10700557 intron stan + chr2R 10700643 intron stan + chr2R_4_10700001 chr2R_10700001 RAL-21 670 chr2R 10783657 10783704 chr2R 10783846 10783892 14 186 5.0 3.5 4.2 2.7 235 chr2R 10783657 intron,intron CG33144 -,CR44299 + chr2R 10783774 intron,intron CG33144 -,CR44299 + chr2R 10783892 intron,intron CG33144 -,CR44299 + chr2R_14_10780001 chr2R_10780001 RAL-21 671 chr2R 10799761 10799802 chr2R 10799866 10799910 7 107 0.5 4.5 2.5 2.0 149 chr2R 10799761 intergenic not near genes chr2R 10799836 intergenic not near genes chr2R 10799910 intergenic not near genes chr2R_7_10795001 chr2R_10795001 RAL-21 672 chr2R 10834239 10834278 chr2R 10834691 10834731 5 457 26.5 16.0 21.2 0.2 492 chr2R 10834239 intron CG12344 - chr2R 10834485 intron CG12344 - chr2R 10834731 intron CG12344 - chr2R_5_10830001 chr2R_10830001 RAL-21 673 chr2R 10860466 10860496 chr2R 10860568 10860598 8 102 4.0 4.5 4.2 1.5 132 chr2R 10860466 intron CG30015 - chr2R 10860532 intron CG30015 - chr2R 10860598 intron CG30015 - chr2R_8_10860001 chr2R_10860001 RAL-21 674 chr2R 10937805 10937822 chr2R 10937962 10937969 6 154 0.0 3.5 1.8 2.1 164 chr2R 10937805 intergenic not near genes chr2R 10937887 intergenic not near genes chr2R 10937969 intergenic Spn47C - chr2R_6_10935001 chr2R_10935001 RAL-21 675 chr2R 10948038 10948062 chr2R 10955578 10955633 17.6 6 7559 1.0 3.5 2.2 1.9 7595 chr2R 10948038 intergenic not near genes chr2R 10951836 intergenic not near genes chr2R 10955633 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-21 676 chr2R 10959076 10959103 chr2R 10959175 10959202 11 99 3.0 1.5 2.2 3.4 126 chr2R 10959076 intergenic not near genes chr2R 10959139 intergenic not near genes chr2R 10959202 intergenic not near genes chr2R_11_10955001 chr2R_10955001 RAL-21 677 chr2R 10979660 10979681 chr2R 10980133 10980169 297 5 481 2.0 3.5 2.8 1.3 509 chr2R 10979660 intergenic not near genes chr2R 10979914 intergenic not near genes chr2R 10980169 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-21 678 chr2R 11009795 11009836 chr2R 11018989 11019001 roo 6 9183 6.0 3.5 4.8 1.0 9206 chr2R 11009795 intron luna - chr2R 11014398 intron luna - chr2R 11019001 intron luna - chr2R_6_11010001 chr2R_11010001 RAL-21 679 chr2R 11064682 11064734 chr2R 11064785 11064837 13 103 3.5 6.0 4.8 2.2 155 chr2R 11064682 intron luna - chr2R 11064760 intron luna - chr2R 11064837 intron luna - chr2R_13_11060001 chr2R_11060001 RAL-21 680 chr2R 11130856 11130897 chr2R 11130959 11131019 4 112 2.0 0.0 1.0 2.0 163 chr2R 11130856 intergenic not near genes chr2R 11130938 intergenic not near genes chr2R 11131019 intergenic not near genes chr2R_4_11130001 chr2R_11130001 RAL-21 681 chr2R 11161650 11161655 chr2R 11161810 11161815 4 160 3.5 4.0 3.8 0.8 165 chr2R 11161650 intron,intron CG13229 -,shn + chr2R 11161732 intron,intron CG13229 -,shn + chr2R 11161815 intron,intron CG13229 -,shn + chr2R_4_11160001 chr2R_11160001 RAL-21 682 chr2R 11179247 11179285 chr2R 11179353 11179390 6 104 6.5 1.5 4.0 1.2 143 chr2R 11179247 intron shn + chr2R 11179318 intron shn + chr2R 11179390 intron shn + chr2R_6_11175001 chr2R_11175001 RAL-21 683 chr2R 11184670 11184679 chr2R 11184767 11184776 4 97 10.5 6.0 8.2 0.4 106 chr2R 11184670 intron shn + chr2R 11184723 intron shn + chr2R 11184776 intron shn + chr2R_4_11180001 chr2R_11180001 RAL-21 684 chr2R 11207799 11207848 chr2R 11208012 11208018 BS 10 208 4.0 8.5 6.2 1.4 219 chr2R 11207799 intron shn + chr2R 11207908 intron shn + chr2R 11208018 intron shn + chr2R_10_11205001 chr2R_11205001 RAL-21 685 chr2R 11249155 11249197 chr2R 11249296 11249308 11 136 3.0 0.0 1.5 4.4 153 chr2R 11249155 intergenic CG43112 + chr2R 11249232 intergenic CG43112 + chr2R 11249308 intergenic CG43112 + chr2R_11_11245001 chr2R_11245001 RAL-21 686 chr2R 11260501 11260533 chr2R 11260627 11260653 7 125 4.5 1.0 2.8 1.8 152 chr2R 11260501 intergenic not near genes chr2R 11260577 intergenic not near genes chr2R 11260653 intergenic Cpr47Ed - chr2R_7_11260001 chr2R_11260001 RAL-21 687 chr2R 11297620 11297634 chr2R 11301964 11301978 flea 4 4344 3.0 0.0 1.5 1.6 4358 chr2R 11297620 intergenic CG42336 - chr2R 11299799 intergenic not near genes chr2R 11301978 5` UTR CG7741 + chr2R_4_11295001 chr2R_11295001 RAL-21 688 chr2R 11336571 11336610 chr2R 11336664 11336712 13 97 2.5 4.5 3.5 2.9 141 chr2R 11336571 intergenic sha +,lambdaTry + chr2R 11336642 intergenic sha +,lambdaTry + chr2R 11336712 intergenic lambdaTry +,sha + chr2R_13_11335001 chr2R_11335001 RAL-21 689 chr2R 11344147 11344156 chr2R 11344263 11344272 4 116 0.0 6.5 3.2 1.0 125 chr2R 11344147 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344272 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-21 690 chr2R 11368009 11368039 chr2R 11368105 11368135 9 96 7.0 5.5 6.2 1.2 126 chr2R 11368009 intron CG13204 + chr2R 11368072 intron CG13204 + chr2R 11368135 intron CG13204 + chr2R_9_11365001 chr2R_11365001 RAL-21 691 chr2R 11415504 11415539 chr2R 11418673 11418708 opus 8 3168 5.5 5.5 5.5 1.2 3204 chr2R 11415504 intron Drip - chr2R 11417106 intron Drip - chr2R 11418708 intron Drip - chr2R_8_11415001 chr2R_11415001 RAL-21 692 chr2R 11472636 11472675 chr2R 11473853 11473892 pogo 11 1214 5.0 6.0 5.5 1.7 1256 chr2R 11472636 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473892 intergenic not near genes chr2R_11_11470001 chr2R_11470001 RAL-21 693 chr2R 11480779 11480834 chr2R 11480892 11480937 9 112 0.0 1.5 0.8 5.0 158 chr2R 11480779 intron inv + chr2R 11480858 intron inv + chr2R 11480937 intron inv + chr2R_9_11480001 chr2R_11480001 RAL-21 694 chr2R 11494577 11494631 chr2R 11494686 11494725 5 103 1.5 2.5 2.0 1.7 148 chr2R 11494577 intron inv + chr2R 11494651 intron inv + chr2R 11494725 intron inv + chr2R_5_11490001 chr2R_11490001 RAL-21 695 chr2R 11495170 11495197 chr2R 11495469 11495496 6 305 1.5 5.5 3.5 1.3 326 chr2R 11495170 intron inv + chr2R 11495333 intron inv + chr2R 11495496 intron inv + chr2R_6_11495001 chr2R_11495001 RAL-21 696 chr2R 11516570 11516604 chr2R 11516717 11516760 7 153 1.0 1.5 1.2 3.2 190 chr2R 11516570 intergenic not near genes chr2R 11516665 intergenic not near genes chr2R 11516760 intergenic not near genes chr2R_7_11515001 chr2R_11515001 RAL-21 697 chr2R 11555474 11555522 chr2R 11555610 11555658 7 136 0.0 1.5 0.8 3.9 184 chr2R 11555474 intergenic not near genes chr2R 11555566 intergenic not near genes chr2R 11555658 intergenic not near genes chr2R_7_11555001 chr2R_11555001 RAL-21 698 chr2R 11667362 11667399 chr2R 11667476 11667513 9 113 3.0 3.5 3.2 2.1 151 chr2R 11667362 intron,intron Roc2 -,Tret1-1 + chr2R 11667438 intron,intron Roc2 -,Tret1-1 + chr2R 11667513 intron,intron Roc2 -,Tret1-1 + chr2R_9_11665001 chr2R_11665001 RAL-21 699 chr2R 11697835 11697874 chr2R 11698095 11698135 12 256 4.5 1.5 3.0 3.0 300 chr2R 11697835 intergenic CG13197 + chr2R 11697985 intergenic CG13197 + chr2R 11698135 intergenic CG13197 + chr2R_12_11695001 chr2R_11695001 RAL-21 700 chr2R 12120408 12120423 chr2R 12120485 12120505 4 77 3.0 2.0 2.5 1.1 97 chr2R 12120408 intergenic not near genes chr2R 12120456 intergenic not near genes chr2R 12120505 intergenic not near genes chr2R_4_12120001 chr2R_12120001 RAL-21 701 chr2R 12124812 12124855 chr2R 12124916 12124959 7 102 4.0 2.5 3.2 1.7 147 chr2R 12124812 intergenic not near genes chr2R 12124886 intergenic not near genes chr2R 12124959 intergenic not near genes chr2R_7_12120001 chr2R_12120001 RAL-21 702 chr2R 12185984 12186037 chr2R 12186099 12186152 24 111 7.0 6.5 6.8 3.1 168 chr2R 12185984 intron Cyp6g1 + chr2R 12186068 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_24_12185001 chr2R_12185001 RAL-21 703 chr2R 12185222 12185222 chr2R 12188127 12188144 4 2909 14.0 90.5 52.2 0.1 2922 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186683 exon Cyp6g1 + chr2R 12188144 3` UTR Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-21 704 chr2R 12187473 12187525 chr2R 12190097 12190123 12 2607 39.0 25.5 32.2 0.4 2650 chr2R 12187473 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_12_12185001 chr2R_12185001 RAL-21 705 chr2R 12217555 12217596 chr2R 12217656 12217681 8 95 2.0 1.0 1.5 3.2 126 chr2R 12217555 intergenic not near genes chr2R 12217618 intergenic not near genes chr2R 12217681 intergenic not near genes chr2R_8_12215001 chr2R_12215001 RAL-21 706 chr2R 12363368 12363417 chr2R 12363820 12363850 13 450 3.0 4.0 3.5 2.9 482 chr2R 12363368 intergenic CG30043 + chr2R 12363609 intergenic CG30043 + chr2R 12363850 intergenic not near genes chr2R_13_12360001 chr2R_12360001 RAL-21 707 chr2R 12481153 12481162 chr2R 12482957 12482986 roo 4 1813 2.0 3.0 2.5 1.1 1833 chr2R 12481153 exon Dh44-R2 + chr2R 12482070 intron Dh44-R2 + chr2R 12482986 intron Dh44-R2 + chr2R_4_12480001 chr2R_12480001 RAL-21 708 chr2R 12501699 12501720 chr2R 12503854 12503902 Rt1c 4 2174 0.5 2.0 1.2 1.8 2203 chr2R 12501699 intron fdl - chr2R 12502800 intron fdl - chr2R 12503902 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-21 709 chr2R 12504129 12504177 chr2R 12504225 12504258 4 92 6.0 5.0 5.5 0.6 129 chr2R 12504129 intron fdl - chr2R 12504194 intron fdl - chr2R 12504258 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-21 710 chr2R 12527278 12527285 chr2R 12527507 12527514 4 228 2.5 9.5 6.0 0.6 236 chr2R 12527278 intergenic not near genes chr2R 12527396 intergenic not near genes chr2R 12527514 intergenic not near genes chr2R_4_12525001 chr2R_12525001 RAL-21 711 chr2R 12565562 12565597 chr2R 12565965 12566000 17 401 0.0 2.5 1.2 7.7 438 chr2R 12565562 intergenic not near genes chr2R 12565781 intergenic Cyp301a1 + chr2R 12566000 intergenic Cyp301a1 + chr2R_17_12565001 chr2R_12565001 RAL-21 712 chr2R 12606023 12606038 chr2R 12606279 12606298 4 256 1.5 3.0 2.2 1.2 275 chr2R 12606023 intron Amph + chr2R 12606160 intron Amph + chr2R 12606298 intron Amph + chr2R_4_12605001 chr2R_12605001 RAL-21 713 chr2R 12707497 12707548 chr2R 12715883 12715934 roo 15 8386 4.0 3.0 3.5 3.3 8437 chr2R 12707497 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715934 intron CG42663 + chr2R_15_12710001 chr2R_12710001 RAL-21 714 chr2R 12728851 12728905 chr2R 12728974 12729023 7 121 0.0 1.5 0.8 3.9 172 chr2R 12728851 intron CG42663 + chr2R 12728937 intron CG42663 + chr2R 12729023 intron CG42663 + chr2R_7_12725001 chr2R_12725001 RAL-21 715 chr2R 12771163 12771183 chr2R 12771432 12771452 6 269 2.0 2.0 2.0 2.0 289 chr2R 12771163 intergenic not near genes chr2R 12771308 intergenic not near genes chr2R 12771452 intergenic not near genes chr2R_6_12770001 chr2R_12770001 RAL-21 716 chr2R 12777799 12777815 chr2R 12777928 12777944 4 129 0.0 7.0 3.5 0.9 145 chr2R 12777799 5` UTR CR45266 + chr2R 12777872 5` UTR CR45266 + chr2R 12777944 5` UTR CR45266 + chr2R_4_12775001 chr2R_12775001 RAL-21 717 chr2R 12819449 12819477 chr2R 12824534 12824564 jockey 4 5083 1.0 1.5 1.2 1.8 5115 chr2R 12819449 intergenic not near genes chr2R 12822006 intergenic not near genes chr2R 12824564 intergenic not near genes chr2R_4_12820001 chr2R_12820001 RAL-21 718 chr2R 12845395 12845440 chr2R 12845496 12845537 6 100 2.5 1.5 2.0 2.0 142 chr2R 12845395 intergenic CG17575 - chr2R 12845466 intergenic CG17575 - chr2R 12845537 intergenic CG17575 - chr2R_6_12845001 chr2R_12845001 RAL-21 719 chr2R 12947727 12947733 chr2R 12947823 12947829 5 96 0.0 9.5 4.8 0.9 102 chr2R 12947727 intergenic not near genes chr2R 12947778 intergenic not near genes chr2R 12947829 intergenic not near genes chr2R_5_12945001 chr2R_12945001 RAL-21 720 chr2R 12952822 12952849 chr2R 12952926 12952953 12 103 0.0 2.0 1.0 6.0 131 chr2R 12952822 intergenic CG13321 + chr2R 12952888 intergenic CG13321 + chr2R 12952953 intergenic CG13321 + chr2R_12_12950001 chr2R_12950001 RAL-21 721 chr2R 12982096 12982126 chr2R 12982270 12982300 11 174 3.0 5.0 4.0 2.2 204 chr2R 12982096 intergenic not near genes chr2R 12982198 intergenic not near genes chr2R 12982300 intergenic not near genes chr2R_11_12980001 chr2R_12980001 RAL-21 722 chr2R 13009875 13009918 chr2R 13009975 13009982 4 85 0.0 0.5 0.2 3.3 107 chr2R 13009875 intergenic not near genes chr2R 13009928 intergenic not near genes chr2R 13009982 intergenic not near genes chr2R_4_13005001 chr2R_13005001 RAL-21 723 chr2R 13013974 13014020 chr2R 13014082 13014127 13 108 0.0 1.5 0.8 7.2 153 chr2R 13013974 intergenic not near genes chr2R 13014050 intergenic not near genes chr2R 13014127 intergenic not near genes chr2R_13_13010001 chr2R_13010001 RAL-21 724 chr2R 13027723 13027739 chr2R 13027822 13027838 4 98 5.5 1.5 3.5 0.9 115 chr2R 13027723 intergenic not near genes chr2R 13027780 intergenic not near genes chr2R 13027838 intergenic not near genes chr2R_4_13025001 chr2R_13025001 RAL-21 725 chr2R 13119966 13120016 chr2R 13120159 13120199 12 188 2.5 0.5 1.5 4.8 233 chr2R 13119966 intron CG13325 + chr2R 13120082 intron CG13325 + chr2R 13120199 intron CG13325 + chr2R_12_13120001 chr2R_13120001 RAL-21 726 chr2R 13136833 13136863 chr2R 13141641 13141674 Doc 5 4814 2.5 4.0 3.2 1.2 4841 chr2R 13136833 exon Cap-G + chr2R 13139254 intron Cap-G + chr2R 13141674 intron Cap-G + chr2R_5_13135001 chr2R_13135001 RAL-21 727 chr2R 13248339 13248567 chr2R 13248447 13248666 17 104 3.5 3.5 3.5 3.8 327 chr2R 13248339 intron Mp20 + chr2R 13248502 intron Mp20 + chr2R 13248666 intron Mp20 + chr2R_17_13245001 chr2R_13245001 RAL-21 728 chr2R 13261146 13261178 chr2R 13261261 13261293 7 114 0.5 4.5 2.5 2.0 147 chr2R 13261146 intron CG42319 + chr2R 13261220 intron CG42319 + chr2R 13261293 intron CG42319 + chr2R_7_13260001 chr2R_13260001 RAL-21 729 chr2R 13290309 13290319 chr2R 13290475 13290485 5 166 0.0 4.0 2.0 1.7 176 chr2R 13290309 intron Dh31-R - chr2R 13290397 intron Dh31-R - chr2R 13290485 intron Dh31-R - chr2R_5_13290001 chr2R_13290001 RAL-21 730 chr2R 13431473 13431519 chr2R 13431571 13431618 16 98 7.0 5.0 6.0 2.3 145 chr2R 13431473 intron CG42321 - chr2R 13431546 intron CG42321 - chr2R 13431618 intron CG42321 - chr2R_16_13430001 chr2R_13430001 RAL-21 731 chr2R 13439088 13439136 chr2R 13439223 13439262 10 129 3.5 2.5 3.0 2.5 174 chr2R 13439088 intergenic CG42321 -,cnn - chr2R 13439175 intergenic CG42321 -,cnn - chr2R 13439262 intergenic cnn -,CG42321 - chr2R_10_13435001 chr2R_13435001 RAL-21 732 chr2R 13464459 13464500 chr2R 13464609 13464651 10 150 3.0 6.0 4.5 1.8 192 chr2R 13464459 intron arr - chr2R 13464555 intron arr - chr2R 13464651 intron arr - chr2R_10_13460001 chr2R_13460001 RAL-21 733 chr2R 13547078 13547106 chr2R 13547277 13547321 11 213 2.0 2.0 2.0 3.7 243 chr2R 13547078 intron CG6145 - chr2R 13547200 intron CG6145 - chr2R 13547321 intron CG6145 - chr2R_11_13545001 chr2R_13545001 RAL-21 734 chr2R 13554769 13554773 chr2R 13554867 13554878 5 104 0.0 8.0 4.0 1.0 109 chr2R 13554769 intron Roe1 + chr2R 13554824 intron Roe1 + chr2R 13554878 intron Roe1 + chr2R_5_13550001 chr2R_13550001 RAL-21 735 chr2R 13580483 13580525 chr2R 13580853 13580882 jockey 8 366 2.5 2.0 2.2 2.5 399 chr2R 13580483 3` UTR CG6191 - chr2R 13580682 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580882 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_8_13580001 chr2R_13580001 RAL-21 736 chr2R 13636758 13636767 chr2R 13636883 13636892 5 125 2.0 2.5 2.2 1.6 134 chr2R 13636758 intron fas + chr2R 13636825 intron fas + chr2R 13636892 intron fas + chr2R_5_13635001 chr2R_13635001 RAL-21 737 chr2R 13695643 13695667 chr2R 13696204 13696220 4 558 4.5 3.0 3.8 0.8 577 chr2R 13695643 intron fas + chr2R 13695932 intron fas + chr2R 13696220 intron fas + chr2R_4_13695001 chr2R_13695001 RAL-21 738 chr2R 13709813 13709835 chr2R 13709940 13709962 4 126 2.0 3.0 2.5 1.1 149 chr2R 13709813 intron fas + chr2R 13709888 intron fas + chr2R 13709962 intron fas + chr2R_4_13705001 chr2R_13705001 RAL-21 739 chr2R 13728114 13728133 chr2R 13735794 13735803 opus 6 7678 4.5 0.0 2.2 1.9 7689 chr2R 13728114 intron fas + chr2R 13731958 intron fas + chr2R 13735803 intron fas + chr2R_6_13730001 chr2R_13730001 RAL-21 740 chr2R 13738904 13738939 chr2R 13739015 13739050 4 111 1.5 1.5 1.5 1.6 146 chr2R 13738904 intron fas + chr2R 13738977 intron fas + chr2R 13739050 intron fas + chr2R_4_13735001 chr2R_13735001 RAL-21 741 chr2R 13752793 13752833 chr2R 13752900 13752951 9 117 1.5 2.5 2.0 3.0 158 chr2R 13752793 intergenic not near genes chr2R 13752872 intergenic not near genes chr2R 13752951 intergenic not near genes chr2R_9_13750001 chr2R_13750001 RAL-21 742 chr2R 13768986 13768997 chr2R 13769096 13769116 4 116 3.5 3.0 3.2 1.0 130 chr2R 13768986 intergenic not near genes chr2R 13769051 intergenic not near genes chr2R 13769116 intergenic not near genes chr2R_4_13765001 chr2R_13765001 RAL-21 743 chr2R 13770519 13770527 chr2R 13770606 13770637 4 100 0.5 5.5 3.0 1.0 118 chr2R 13770519 intron Cpr50Ca + chr2R 13770578 intron Cpr50Ca + chr2R 13770637 intron Cpr50Ca + chr2R_4_13770001 chr2R_13770001 RAL-21 744 chr2R 13790306 13790335 chr2R 13790402 13790414 10 93 4.5 0.0 2.2 3.1 108 chr2R 13790306 intergenic not near genes chr2R 13790360 intergenic not near genes chr2R 13790414 intergenic not near genes chr2R_10_13790001 chr2R_13790001 RAL-21 745 chr2R 13905587 13905610 chr2R 13907589 13907612 Rt1a 9 1997 6.0 2.5 4.2 1.7 2025 chr2R 13905587 intron shot - chr2R 13906600 intron shot - chr2R 13907612 intron shot - chr2R_9_13905001 chr2R_13905001 RAL-21 746 chr2R 13925867 13925881 chr2R 13926041 13926054 6 174 10.5 5.0 7.8 0.7 187 chr2R 13925867 intron shot - chr2R 13925960 intron shot - chr2R 13926054 intron shot - chr2R_6_13925001 chr2R_13925001 RAL-21 747 chr2R 13925883 13925893 chr2R 13926037 13926037 4 162 6.0 5.0 5.5 0.6 154 chr2R 13925883 intron shot - chr2R 13925960 intron shot - chr2R 13926037 intron shot - chr2R_4_13925001 chr2R_13925001 RAL-21 748 chr2R 14003607 14003643 chr2R 14003724 14003760 12 117 6.0 5.0 5.5 1.8 153 chr2R 14003607 intron mam + chr2R 14003684 intron mam + chr2R 14003760 intron mam + chr2R_12_14000001 chr2R_14000001 RAL-21 749 chr2R 14014954 14014997 chr2R 14015768 14015811 8 814 4.0 3.0 3.5 1.8 857 chr2R 14014954 intron mam + chr2R 14015382 intron mam + chr2R 14015811 intron mam + chr2R_8_14015001 chr2R_14015001 RAL-21 750 chr2R 14141935 14141947 chr2R 14142060 14142072 6 125 8.0 7.5 7.8 0.7 137 chr2R 14141935 intergenic not near genes chr2R 14142004 intergenic not near genes chr2R 14142072 intergenic not near genes chr2R_6_14140001 chr2R_14140001 RAL-21 751 chr2R 14142436 14142475 chr2R 14142546 14142585 11 110 4.0 4.5 4.2 2.1 149 chr2R 14142436 intergenic not near genes chr2R 14142510 intergenic not near genes chr2R 14142585 intergenic not near genes chr2R_11_14140001 chr2R_14140001 RAL-21 752 chr2R 14235439 14235483 chr2R 14235540 14235583 13 98 3.0 1.0 2.0 4.3 144 chr2R 14235439 5` UTR Opa1 - chr2R 14235511 intergenic Opa1 -,CG8485 - chr2R 14235583 intergenic Opa1 -,CG8485 - chr2R_13_14235001 chr2R_14235001 RAL-21 753 chr2R 14277570 14277611 chr2R 14277662 14277713 14 99 3.0 4.0 3.5 3.1 143 chr2R 14277570 5` UTR Ih + chr2R 14277642 5` UTR Ih + chr2R 14277713 5` UTR Ih + chr2R_14_14275001 chr2R_14275001 RAL-21 754 chr2R 14294809 14294856 chr2R 14294909 14294956 16 98 5.0 3.5 4.2 3.1 147 chr2R 14294809 intron Ih + chr2R 14294882 intron Ih + chr2R 14294956 intron Ih + chr2R_16_14290001 chr2R_14290001 RAL-21 755 chr2R 14312036 14312058 chr2R 14312527 14312550 5 490 2.5 4.0 3.2 1.2 514 chr2R 14312036 intron Shroom + chr2R 14312293 intron Shroom + chr2R 14312550 intron Shroom + chr2R_5_14310001 chr2R_14310001 RAL-21 756 chr2R 14357536 14357573 chr2R 14357645 14357683 10 109 6.0 5.5 5.8 1.5 147 chr2R 14357536 intergenic CG8617 -,Arc1 - chr2R 14357610 intergenic Arc1 -,CG8617 - chr2R 14357683 intergenic Arc1 -,CG8617 - chr2R_10_14355001 chr2R_14355001 RAL-21 757 chr2R 14393847 14393895 chr2R 14393949 14393964 9 95 3.0 3.5 3.2 2.1 117 chr2R 14393847 intergenic not near genes chr2R 14393906 intergenic not near genes chr2R 14393964 intergenic not near genes chr2R_9_14390001 chr2R_14390001 RAL-21 758 chr2R 14467306 14467319 chr2R 14476483 14476487 roo 6 9176 1.5 5.0 3.2 1.4 9181 chr2R 14467306 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476487 5` UTR CR44462 + chr2R_6_14470001 chr2R_14470001 RAL-21 759 chr2R 14497377 14497400 chr2R 14498556 14498586 1360 8 1184 7.5 6.5 7.0 1.0 1209 chr2R 14497377 3` UTR Cpsf160 - chr2R 14497982 intron Cpsf160 - chr2R 14498586 3` UTR Cpsf160 - chr2R_8_14495001 chr2R_14495001 RAL-21 760 chr2R 14497401 14497416 chr2R 14498553 14498598 1360 7 1178 5.0 6.0 5.5 1.1 1197 chr2R 14497401 3` UTR Cpsf160 - chr2R 14498000 intron Cpsf160 - chr2R 14498598 3` UTR Cpsf160 - chr2R_7_14495001 chr2R_14495001 RAL-21 761 chr2R 14524839 14524857 chr2R 14524948 14524974 9 116 2.5 0.5 1.5 3.6 135 chr2R 14524839 intergenic not near genes chr2R 14524906 intergenic not near genes chr2R 14524974 intergenic not near genes chr2R_9_14520001 chr2R_14520001 RAL-21 762 chr2R 14653892 14653926 chr2R 14654012 14654025 8 117 2.5 5.0 3.8 1.7 133 chr2R 14653892 intergenic not near genes chr2R 14653958 intergenic not near genes chr2R 14654025 intergenic not near genes chr2R_8_14650001 chr2R_14650001 RAL-21 763 chr2R 14842371 14842378 chr2R 14842487 14842494 5 116 5.0 2.5 3.8 1.0 123 chr2R 14842371 intergenic NaPi-T - chr2R 14842432 intergenic NaPi-T - chr2R 14842494 intergenic NaPi-T - chr2R_5_14840001 chr2R_14840001 RAL-21 764 chr2R 14889193 14889239 chr2R 14897821 14897836 Max-element 10 8620 7.0 0.0 3.5 2.2 8643 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893514 intergenic not near genes chr2R 14897836 intergenic not near genes chr2R_10_14890001 chr2R_14890001 RAL-21 765 chr2R 14906471 14906515 chr2R 14906601 14906641 12 129 5.0 3.5 4.2 2.3 170 chr2R 14906471 intron CG10249 - chr2R 14906556 intron CG10249 - chr2R 14906641 intron CG10249 - chr2R_12_14905001 chr2R_14905001 RAL-21 766 chr2R 14911684 14911727 chr2R 14911827 14911870 7 143 3.0 4.0 3.5 1.6 186 chr2R 14911684 intron CG10249 - chr2R 14911777 intron CG10249 - chr2R 14911870 intron CG10249 - chr2R_7_14910001 chr2R_14910001 RAL-21 767 chr2R 14917831 14917881 chr2R 14917933 14917986 14 101 4.5 6.5 5.5 2.2 155 chr2R 14917831 intron CG10249 - chr2R 14917908 intron CG10249 - chr2R 14917986 intron CG10249 - chr2R_14_14915001 chr2R_14915001 RAL-21 768 chr2R 14922134 14922174 chr2R 14922229 14922270 16 89 5.0 4.0 4.5 2.9 136 chr2R 14922134 intron CG10249 - chr2R 14922202 intron CG10249 - chr2R 14922270 intron CG10249 - chr2R_16_14920001 chr2R_14920001 RAL-21 769 chr2R 14985460 14985479 chr2R 14985531 14985541 6 82 0.5 1.0 0.8 3.3 81 chr2R 14985460 intron pcs + chr2R 14985500 intron pcs + chr2R 14985541 intron pcs + chr2R_6_14985001 chr2R_14985001 RAL-21 770 chr2R 14998504 14998510 chr2R 14998664 14998670 4 160 3.0 6.5 4.8 0.7 166 chr2R 14998504 intergenic not near genes chr2R 14998587 intergenic not near genes chr2R 14998670 intergenic not near genes chr2R_4_14995001 chr2R_14995001 RAL-21 771 chr2R 15004712 15004761 chr2R 15005061 15005086 jockey 18 347 3.5 4.5 4.0 3.6 374 chr2R 15004712 intergenic not near genes chr2R 15004899 intergenic not near genes chr2R 15005086 intergenic not near genes chr2R_18_15000001 chr2R_15000001 RAL-21 772 chr2R 15015441 15015485 chr2R 15022885 15022926 mdg1 20 7442 0.5 2.0 1.2 9.1 7485 chr2R 15015441 intron hbs + chr2R 15019184 intron hbs + chr2R 15022926 intron hbs + chr2R_20_15015001 chr2R_15015001 RAL-21 773 chr2R 15027472 15027516 chr2R 15027577 15027624 8 104 1.0 1.5 1.2 3.6 152 chr2R 15027472 intron hbs + chr2R 15027548 intron hbs + chr2R 15027624 intron hbs + chr2R_8_15025001 chr2R_15025001 RAL-21 774 chr2R 15119299 15119345 chr2R 15127800 15127831 Tirant 6 8489 4.0 1.0 2.5 1.7 8532 chr2R 15119299 intron chn + chr2R 15123565 intron chn + chr2R 15127831 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-21 775 chr2R 15374792 15375060 chr2R 15374895 15375190 5 114 4.0 1.5 2.8 1.3 398 chr2R 15374792 intergenic not near genes chr2R 15374991 intergenic not near genes chr2R 15375190 intergenic not near genes chr2R_5_15370001 chr2R_15370001 RAL-21 776 chr2R 15405026 15405047 chr2R 15405170 15405191 7 144 1.5 0.0 0.8 3.9 165 chr2R 15405026 intron,5` UTR CG43729 +,CR45020 + chr2R 15405108 intron CG43729 + chr2R 15405191 intron CG43729 + chr2R_7_15405001 chr2R_15405001 RAL-21 777 chr2R 15606117 15606128 chr2R 15606213 15606225 4 96 9.0 3.5 6.2 0.6 108 chr2R 15606117 intergenic not near genes chr2R 15606171 intergenic not near genes chr2R 15606225 intergenic not near genes chr2R_4_15605001 chr2R_15605001 RAL-21 778 chr2R 15696505 15696549 chr2R 15696648 15696686 18 143 2.5 3.5 3.0 4.5 181 chr2R 15696505 intergenic CG33461 +,CG33462 + chr2R 15696596 intergenic CG33461 +,CG33462 + chr2R 15696686 intergenic CG33462 +,CG33461 + chr2R_18_15695001 chr2R_15695001 RAL-21 779 chr2R 15930397 15930430 chr2R 15930495 15930538 11 107 3.5 4.0 3.8 2.3 141 chr2R 15930397 intron bdg - chr2R 15930468 intron bdg - chr2R 15930538 intron bdg - chr2R_11_15930001 chr2R_15930001 RAL-21 780 chr2R 15941658 15941693 chr2R 15941763 15941776 7 100 3.5 6.0 4.8 1.2 118 chr2R 15941658 intergenic CG8299 - chr2R 15941717 intergenic CG8299 - chr2R 15941776 intergenic CG8299 - chr2R_7_15940001 chr2R_15940001 RAL-21 781 chr2R 16079121 16079156 chr2R 16079206 16079257 16 98 2.0 4.0 3.0 4.0 136 chr2R 16079121 intergenic CR43415 - chr2R 16079189 intergenic CR43415 - chr2R 16079257 intergenic CR43415 - chr2R_16_16075001 chr2R_16075001 RAL-21 782 chr2R 16352826 16352866 chr2R 16352926 16352969 11 102 4.5 0.0 2.2 3.4 143 chr2R 16352826 intergenic not near genes chr2R 16352898 intergenic not near genes chr2R 16352969 intergenic not near genes chr2R_11_16350001 chr2R_16350001 RAL-21 783 chr2R 16380110 16380132 chr2R 16380228 16380243 5 115 6.0 3.0 4.5 0.9 133 chr2R 16380110 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380176 3` UTR CR45317 - chr2R 16380243 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_5_16380001 chr2R_16380001 RAL-21 784 chr2R 16380135 16380140 chr2R 16380226 16380257 4 111 4.5 3.0 3.8 0.8 122 chr2R 16380135 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380196 intergenic CR45317 -,CR45316 +,CG43187 + chr2R 16380257 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_4_16380001 chr2R_16380001 RAL-21 785 chr2R 16518041 16518063 chr2R 16518123 16518159 7 84 7.5 2.5 5.0 1.2 118 chr2R 16518041 intron Sema-2a + chr2R 16518100 intron Sema-2a + chr2R 16518159 intron Sema-2a + chr2R_7_16515001 chr2R_16515001 RAL-21 786 chr2R 16539621 16539668 chr2R 16544850 16544897 copia 15 5229 4.0 4.0 4.0 3.0 5276 chr2R 16539621 intergenic not near genes chr2R 16542259 intergenic not near genes chr2R 16544897 intergenic not near genes chr2R_15_16540001 chr2R_16540001 RAL-21 787 chr2R 16571852 16571897 chr2R 16571967 16572005 20 114 3.0 3.5 3.2 4.8 153 chr2R 16571852 intergenic CG4927 + chr2R 16571928 intergenic CG4927 + chr2R 16572005 intergenic CG4927 + chr2R_20_16570001 chr2R_16570001 RAL-21 788 chr2R 16668918 16668966 chr2R 16669026 16669074 14 108 3.5 5.0 4.2 2.7 156 chr2R 16668918 intergenic not near genes chr2R 16668996 intergenic not near genes chr2R 16669074 intergenic not near genes chr2R_14_16665001 chr2R_16665001 RAL-21 789 chr2R 16672770 16672819 chr2R 16672870 16672919 10 100 1.0 2.0 1.5 4.0 149 chr2R 16672770 exon CG34458 + chr2R 16672844 3` UTR CG34458 + chr2R 16672919 intergenic CG34458 +,CG30463 - chr2R_10_16670001 chr2R_16670001 RAL-21 790 chr2R 16893759 16893801 chr2R 16893861 16893892 12 100 4.0 2.5 3.2 2.9 133 chr2R 16893759 intron CG8910 - chr2R 16893826 intron CG8910 - chr2R 16893892 intron CG8910 - chr2R_12_16890001 chr2R_16890001 RAL-21 791 chr2R 16930613 16930626 chr2R 16930711 16930724 5 98 0.0 3.0 1.5 2.0 111 chr2R 16930613 intron Pkc53E + chr2R 16930668 intron Pkc53E + chr2R 16930724 intron Pkc53E + chr2R_5_16930001 chr2R_16930001 RAL-21 792 chr2R 16981955 16982097 chr2R 16982088 16982188 7 124 0.0 0.5 0.2 5.8 233 chr2R 16981955 intron Cbp53E + chr2R 16982072 intron Cbp53E + chr2R 16982188 intron Cbp53E + chr2R_7_16980001 chr2R_16980001 RAL-21 793 chr2R 16987023 16987057 chr2R 16987163 16987198 14 140 5.5 3.0 4.2 2.7 175 chr2R 16987023 intron Cbp53E + chr2R 16987110 intron Cbp53E + chr2R 16987198 intron Cbp53E + chr2R_14_16985001 chr2R_16985001 RAL-21 794 chr2R 17122581 17122615 chr2R 17122679 17122698 6 95 1.5 3.0 2.2 1.9 117 chr2R 17122581 5` UTR CR45272 + chr2R 17122640 5` UTR CR45272 + chr2R 17122698 5` UTR CR45272 + chr2R_6_17120001 chr2R_17120001 RAL-21 795 chr2R 17132803 17132843 chr2R 17132957 17133003 14 158 5.0 0.0 2.5 4.0 200 chr2R 17132803 intergenic not near genes chr2R 17132903 intergenic not near genes chr2R 17133003 intergenic Acp54A1 + chr2R_14_17130001 chr2R_17130001 RAL-21 796 chr2R 17147242 17147267 chr2R 17152293 17152318 jockey 9 5051 4.0 8.0 6.0 1.3 5076 chr2R 17147242 intergenic not near genes chr2R 17149780 intergenic not near genes chr2R 17152318 intergenic not near genes chr2R_9_17145001 chr2R_17145001 RAL-21 797 chr2R 17161336 17161358 chr2R 17161562 17161576 9 223 0.5 0.0 0.2 7.5 240 chr2R 17161336 intergenic not near genes chr2R 17161456 intergenic not near genes chr2R 17161576 intergenic not near genes chr2R_9_17160001 chr2R_17160001 RAL-21 798 chr2R 17176358 17176386 chr2R 17182558 17182596 diver 12 6209 0.0 3.0 1.5 4.8 6238 chr2R 17176358 intergenic not near genes chr2R 17179477 intergenic not near genes chr2R 17182596 intergenic not near genes chr2R_12_17175001 chr2R_17175001 RAL-21 799 chr2R 17236517 17236535 chr2R 17241741 17241759 copia 5 5223 5.0 4.0 4.5 0.9 5242 chr2R 17236517 intron mbl + chr2R 17239138 intron mbl + chr2R 17241759 intron mbl + chr2R_5_17235001 chr2R_17235001 RAL-21 800 chr2R 17253542 17253587 chr2R 17253671 17253716 13 128 7.5 4.0 5.8 1.9 174 chr2R 17253542 intron mbl + chr2R 17253629 intron mbl + chr2R 17253716 intron mbl + chr2R_13_17250001 chr2R_17250001 RAL-21 801 chr2R 17255693 17255700 chr2R 17255801 17255808 5 108 0.0 9.5 4.8 0.9 115 chr2R 17255693 intron,3` UTR mbl +,CG43272 + chr2R 17255750 intron mbl + chr2R 17255808 intron mbl + chr2R_5_17255001 chr2R_17255001 RAL-21 802 chr2R 17389647 17389688 chr2R 17389768 17389789 15 116 2.0 5.0 3.5 3.3 142 chr2R 17389647 intergenic not near genes chr2R 17389718 intergenic not near genes chr2R 17389789 intergenic not near genes chr2R_15_17385001 chr2R_17385001 RAL-21 803 chr2R 17458996 17459033 chr2R 17459090 17459138 15 103 4.5 4.0 4.2 2.9 142 chr2R 17458996 intron CG14478 + chr2R 17459067 intron CG14478 + chr2R 17459138 intron CG14478 + chr2R_15_17455001 chr2R_17455001 RAL-21 804 chr2R 17470336 17470337 chr2R 17470432 17470441 4 102 5.5 2.0 3.8 0.8 105 chr2R 17470336 intron qkr54B + chr2R 17470388 intron qkr54B + chr2R 17470441 intron qkr54B + chr2R_4_17470001 chr2R_17470001 RAL-21 805 chr2R 17485912 17485947 chr2R 17490686 17490735 F-element 6 4784 5.0 4.0 4.5 1.1 4823 chr2R 17485912 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488324 intron NT5E-2 + chr2R 17490735 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-21 806 chr2R 17627751 17627783 chr2R 17628098 17628130 7 344 3.0 4.0 3.5 1.6 379 chr2R 17627751 intron CG10936 - chr2R 17627940 intron CG10936 - chr2R 17628130 intron CG10936 - chr2R_7_17625001 chr2R_17625001 RAL-21 807 chr2R 17708375 17708422 chr2R 17708476 17708523 14 100 2.5 3.0 2.8 3.7 148 chr2R 17708375 intron CG6424 - chr2R 17708449 intron CG6424 - chr2R 17708523 intron CG6424 - chr2R_14_17705001 chr2R_17705001 RAL-21 808 chr2R 17782344 17782385 chr2R 17783567 17783608 pogo 13 1223 5.5 4.0 4.8 2.2 1264 chr2R 17782344 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783608 intergenic mir-31a - chr2R_13_17780001 chr2R_17780001 RAL-21 809 chr2R 17784004 17784054 chr2R 17784265 17784315 pogo 7 259 3.0 2.0 2.5 2.0 311 chr2R 17784004 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784315 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-21 810 chr2R 17785073 17785093 chr2R 17785181 17785201 7 103 2.5 6.0 4.2 1.3 128 chr2R 17785073 intergenic not near genes chr2R 17785137 intergenic not near genes chr2R 17785201 intergenic not near genes chr2R_7_17785001 chr2R_17785001 RAL-21 811 chr2R 17918181 17918190 chr2R 17918243 17918257 7 87 4.5 1.0 2.8 1.8 76 chr2R 17918181 intron Elk + chr2R 17918219 intron Elk + chr2R 17918257 intron Elk + chr2R_7_17915001 chr2R_17915001 RAL-21 812 chr2R 17937499 17937553 chr2R 17937599 17937653 19 96 5.0 1.5 3.2 4.5 154 chr2R 17937499 intergenic not near genes chr2R 17937576 intergenic not near genes chr2R 17937653 intergenic not near genes chr2R_19_17935001 chr2R_17935001 RAL-21 813 chr2R 17960153 17960174 chr2R 17960258 17960279 5 104 2.0 6.5 4.2 1.0 126 chr2R 17960153 intergenic not near genes chr2R 17960216 intergenic not near genes chr2R 17960279 intergenic not near genes chr2R_5_17960001 chr2R_17960001 RAL-21 814 chr2R 17982907 17982950 chr2R 17983012 17983020 12 102 2.5 1.5 2.0 4.0 113 chr2R 17982907 intron dpr13 - chr2R 17982964 intron dpr13 - chr2R 17983020 intron dpr13 - chr2R_12_17980001 chr2R_17980001 RAL-21 815 chr2R 18045651 18045701 chr2R 18046023 18046073 jockey 16 372 6.0 5.5 5.8 2.4 422 chr2R 18045651 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046073 intergenic CG5767 - chr2R_16_18045001 chr2R_18045001 RAL-21 816 chr2R 18111672 18111711 chr2R 18115560 18115593 F-element 13 3888 5.5 3.5 4.5 2.4 3921 chr2R 18111672 intergenic not near genes chr2R 18113632 intergenic not near genes chr2R 18115593 intergenic not near genes chr2R_13_18110001 chr2R_18110001 RAL-21 817 chr2R 18168374 18168428 chr2R 18168504 18168558 31 129 4.5 7.5 6.0 4.4 184 chr2R 18168374 3` UTR,3` UTR CG42518 +,MED9 + chr2R 18168466 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R 18168558 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R_31_18165001 chr2R_18165001 RAL-21 818 chr2R 18289415 18289459 chr2R 18289537 18289581 4 122 3.5 0.0 1.8 1.4 166 chr2R 18289415 intron,intron sbb -,CG14502 + chr2R 18289498 intron,intron sbb -,CG14502 + chr2R 18289581 exon,intron sbb -,CG14502 + chr2R_4_18285001 chr2R_18285001 RAL-21 819 chr2R 18307557 18307607 chr2R 18307665 18307715 17 105 3.5 2.5 3.0 4.2 158 chr2R 18307557 intron sbb - chr2R 18307636 intron sbb - chr2R 18307715 intron sbb - chr2R_17_18305001 chr2R_18305001 RAL-21 820 chr2R 18308262 18308317 chr2R 18308388 18308442 15 124 2.5 3.0 2.8 3.9 180 chr2R 18308262 intron sbb - chr2R 18308352 intron sbb - chr2R 18308442 intron sbb - chr2R_15_18305001 chr2R_18305001 RAL-21 821 chr2R 18314390 18314433 chr2R 18314484 18314531 13 97 0.5 3.5 2.0 4.3 141 chr2R 18314390 intron sbb - chr2R 18314460 intron sbb - chr2R 18314531 intron sbb - chr2R_13_18310001 chr2R_18310001 RAL-21 822 chr2R 18330466 18330518 chr2R 18330571 18330623 8 104 4.5 2.5 3.5 1.8 157 chr2R 18330466 intron sbb - chr2R 18330544 intron sbb - chr2R 18330623 intron sbb - chr2R_8_18330001 chr2R_18330001 RAL-21 823 chr2R 18358387 18358403 chr2R 18372619 18372619 roo 6 14228 5.5 0.5 3.0 1.5 14232 chr2R 18358387 intergenic not near genes chr2R 18365503 intergenic not near genes chr2R 18372619 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-21 824 chr2R 18375545 18375596 chr2R 18375679 18375727 12 131 2.5 3.5 3.0 3.0 182 chr2R 18375545 intergenic not near genes chr2R 18375636 intergenic not near genes chr2R 18375727 intergenic not near genes chr2R_12_18375001 chr2R_18375001 RAL-21 825 chr2R 18485189 18485236 chr2R 18485299 18485346 13 110 6.5 4.5 5.5 2.0 157 chr2R 18485189 intron CG30116 - chr2R 18485268 intron CG30116 - chr2R 18485346 intron CG30116 - chr2R_13_18485001 chr2R_18485001 RAL-21 826 chr2R 18486840 18486877 chr2R 18487106 18487159 19 275 4.0 3.0 3.5 4.2 319 chr2R 18486840 intron CG30116 - chr2R 18487000 intron CG30116 - chr2R 18487159 intron CG30116 - chr2R_19_18485001 chr2R_18485001 RAL-21 827 chr2R 18534888 18534930 chr2R 18535227 18535254 15 332 5.0 4.5 4.8 2.6 366 chr2R 18534888 3` UTR CG10924 + chr2R 18535071 3` UTR CG10924 + chr2R 18535254 3` UTR CG10924 + chr2R_15_18535001 chr2R_18535001 RAL-21 828 chr2R 18575791 18575822 chr2R 18581984 18582030 3S18 9 6196 1.5 1.5 1.5 3.6 6239 chr2R 18575791 intron GEFmeso - chr2R 18578910 intron GEFmeso - chr2R 18582030 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 RAL-21 829 chr2R 18675158 18675170 chr2R 18675256 18675268 4 98 0.0 9.0 4.5 0.7 110 chr2R 18675158 intergenic not near genes chr2R 18675213 intergenic not near genes chr2R 18675268 intergenic not near genes chr2R_4_18675001 chr2R_18675001 RAL-21 830 chr2R 18738186 18738236 chr2R 18738282 18738332 14 95 1.5 6.0 3.8 2.9 146 chr2R 18738186 intron Hs3st-A + chr2R 18738259 intron Hs3st-A + chr2R 18738332 intron Hs3st-A + chr2R_14_18735001 chr2R_18735001 RAL-21 831 chr2R 18808062 18808075 chr2R 18808164 18808184 6 107 0.0 0.0 0.0 6.0 122 chr2R 18808062 intergenic CG15096 - chr2R 18808123 intergenic CG15096 - chr2R 18808184 intergenic CG15096 - chr2R_6_18805001 chr2R_18805001 RAL-21 832 chr2R 18835871 18835896 chr2R 18835973 18835982 6 99 4.0 0.0 2.0 2.0 111 chr2R 18835871 intron CG15083 + chr2R 18835926 intron CG15083 + chr2R 18835982 intron CG15083 + chr2R_6_18835001 chr2R_18835001 RAL-21 833 chr2R 18876704 18876728 chr2R 18876790 18876813 10 97 1.0 2.5 1.8 3.6 109 chr2R 18876704 intergenic not near genes chr2R 18876758 intergenic not near genes chr2R 18876813 intergenic not near genes chr2R_10_18875001 chr2R_18875001 RAL-21 834 chr2R 18926488 18926525 chr2R 18926595 18926632 9 107 2.0 0.5 1.2 4.1 144 chr2R 18926488 intron sano + chr2R 18926560 intron sano + chr2R 18926632 intron sano + chr2R_9_18925001 chr2R_18925001 RAL-21 835 chr2R 18953141 18953190 chr2R 18953248 18953297 11 106 1.5 1.5 1.5 4.4 156 chr2R 18953141 intron sano + chr2R 18953219 intron sano + chr2R 18953297 intron sano + chr2R_11_18950001 chr2R_18950001 RAL-21 836 chr2R 18964914 18964951 chr2R 18965010 18965047 12 96 2.5 7.5 5.0 2.0 133 chr2R 18964914 intergenic not near genes chr2R 18964980 intergenic not near genes chr2R 18965047 intergenic not near genes chr2R_12_18960001 chr2R_18960001 RAL-21 837 chr2R 19026026 19026060 chr2R 19026186 19026215 7 159 5.0 0.5 2.8 1.8 189 chr2R 19026026 intron 5-HT1B - chr2R 19026120 intron 5-HT1B - chr2R 19026215 intron 5-HT1B - chr2R_7_19025001 chr2R_19025001 RAL-21 838 chr2R 19067703 19067749 chr2R 19067799 19067844 15 95 6.5 2.5 4.5 2.7 141 chr2R 19067703 intron 5-HT1A + chr2R 19067774 intron 5-HT1A + chr2R 19067844 intron 5-HT1A + chr2R_15_19065001 chr2R_19065001 RAL-21 839 chr2R 19183325 19183370 chr2R 19183421 19183465 9 95 2.0 3.0 2.5 2.6 140 chr2R 19183325 intron hppy + chr2R 19183395 intron hppy + chr2R 19183465 intron hppy + chr2R_9_19180001 chr2R_19180001 RAL-21 840 chr2R 19300944 19300993 chr2R 19301047 19301096 17 101 2.5 4.0 3.2 4.0 152 chr2R 19300944 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301096 intron Tab2 + chr2R_17_19300001 chr2R_19300001 RAL-21 841 chr2R 19313944 19313987 chr2R 19314121 19314164 5 168 2.5 1.0 1.8 1.8 220 chr2R 19313944 intron Rgk1 - chr2R 19314054 intron Rgk1 - chr2R 19314164 intron Rgk1 - chr2R_5_19310001 chr2R_19310001 RAL-21 842 chr2R 19528082 19528099 chr2R 19528179 19528196 4 97 2.0 3.0 2.5 1.1 114 chr2R 19528082 3` UTR sm - chr2R 19528139 3` UTR sm - chr2R 19528196 3` UTR sm - chr2R_4_19525001 chr2R_19525001 RAL-21 843 chr2R 19528101 19528121 chr2R 19528173 19528218 6 93 2.0 2.0 2.0 2.0 117 chr2R 19528101 3` UTR sm - chr2R 19528160 3` UTR sm - chr2R 19528218 3` UTR sm - chr2R_6_19525001 chr2R_19525001 RAL-21 844 chr2R 19536445 19536495 chr2R 19536547 19536597 19 99 3.5 1.0 2.2 5.9 152 chr2R 19536445 intron sm - chr2R 19536521 intron sm - chr2R 19536597 intron sm - chr2R_19_19535001 chr2R_19535001 RAL-21 845 chr2R 19588732 19588777 chr2R 19588830 19588875 6 97 3.5 2.5 3.0 1.5 143 chr2R 19588732 intron sm - chr2R 19588804 intron sm - chr2R 19588875 intron sm - chr2R_6_19585001 chr2R_19585001 RAL-21 846 chr2R 19776585 19776620 chr2R 19779928 19779962 jockey 14 3341 5.5 4.0 4.8 2.4 3377 chr2R 19776585 intergenic not near genes chr2R 19778274 intergenic not near genes chr2R 19779962 intergenic not near genes chr2R_14_19775001 chr2R_19775001 RAL-21 847 chr2R 19797355 19797395 chr2R 19797476 19797516 9 119 3.5 1.0 2.2 2.8 161 chr2R 19797355 intergenic not near genes chr2R 19797436 intergenic not near genes chr2R 19797516 intergenic not near genes chr2R_9_19795001 chr2R_19795001 RAL-21 848 chr2R 19848056 19848094 chr2R 19848163 19848200 8 107 3.5 3.5 3.5 1.8 144 chr2R 19848056 intergenic not near genes chr2R 19848128 intergenic not near genes chr2R 19848200 intergenic not near genes chr2R_8_19845001 chr2R_19845001 RAL-21 849 chr2R 19861133 19861180 chr2R 19861241 19861287 10 108 2.5 2.5 2.5 2.9 154 chr2R 19861133 intergenic CR44571 + chr2R 19861210 intergenic not near genes chr2R 19861287 intergenic not near genes chr2R_10_19860001 chr2R_19860001 RAL-21 850 chr2R 19943281 19943289 chr2R 19943386 19943394 6 105 4.5 4.5 4.5 1.1 113 chr2R 19943281 intergenic not near genes chr2R 19943338 intergenic not near genes chr2R 19943394 intergenic not near genes chr2R_6_19940001 chr2R_19940001 RAL-21 851 chr2R 19957421 19957448 chr2R 19962643 19962670 copia 4 5222 4.5 2.5 3.5 0.9 5249 chr2R 19957421 intergenic CG44623 + chr2R 19960046 intergenic not near genes chr2R 19962670 intergenic not near genes chr2R_4_19960001 chr2R_19960001 RAL-21 852 chr2R 20023384 20023420 chr2R 20023491 20023528 6 108 0.0 0.0 0.0 6.0 144 chr2R 20023384 intergenic not near genes chr2R 20023456 intergenic not near genes chr2R 20023528 intergenic not near genes chr2R_6_20020001 chr2R_20020001 RAL-21 853 chr2R 20042402 20042415 chr2R 20042561 20042587 4 169 0.0 2.5 1.2 1.8 185 chr2R 20042402 intergenic not near genes chr2R 20042494 intergenic not near genes chr2R 20042587 intergenic not near genes chr2R_4_20040001 chr2R_20040001 RAL-21 854 chr2R 20118866 20118892 chr2R 20118963 20118993 5 104 0.5 1.5 1.0 2.5 127 chr2R 20118866 intergenic not near genes chr2R 20118930 intergenic not near genes chr2R 20118993 intergenic not near genes chr2R_5_20115001 chr2R_20115001 RAL-21 855 chr2R 20125726 20125746 chr2R 20125822 20125842 9 95 2.5 4.0 3.2 2.1 116 chr2R 20125726 intergenic not near genes chr2R 20125784 intergenic not near genes chr2R 20125842 intergenic not near genes chr2R_9_20125001 chr2R_20125001 RAL-21 856 chr2R 20142429 20142484 chr2R 20142528 20142580 10 96 1.0 2.0 1.5 4.0 151 chr2R 20142429 intergenic not near genes chr2R 20142504 intergenic not near genes chr2R 20142580 intergenic not near genes chr2R_10_20140001 chr2R_20140001 RAL-21 857 chr2R 20174633 20174653 chr2R 20174728 20174749 5 93 1.0 2.0 1.5 2.0 116 chr2R 20174633 intergenic not near genes chr2R 20174691 intergenic not near genes chr2R 20174749 intergenic not near genes chr2R_5_20170001 chr2R_20170001 RAL-21 858 chr2R 20174656 20174675 chr2R 20174723 20174765 5 78 1.5 1.5 1.5 2.0 109 chr2R 20174656 intergenic not near genes chr2R 20174710 intergenic not near genes chr2R 20174765 intergenic not near genes chr2R_5_20170001 chr2R_20170001 RAL-21 859 chr2R 20183966 20184012 chr2R 20184066 20184112 12 99 3.5 4.5 4.0 2.4 146 chr2R 20183966 intergenic not near genes chr2R 20184039 intergenic not near genes chr2R 20184112 intergenic not near genes chr2R_12_20180001 chr2R_20180001 RAL-21 860 chr2R 20572551 20572583 chr2R 20572661 20572693 5 110 3.5 3.5 3.5 1.1 142 chr2R 20572551 intron qsm - chr2R 20572622 intron qsm - chr2R 20572693 intron qsm - chr2R_5_20570001 chr2R_20570001 RAL-21 861 chr2R 20601719 20601752 chr2R 20601824 20601852 9 103 0.5 4.5 2.5 2.6 133 chr2R 20601719 intron bl + chr2R 20601786 intron bl + chr2R 20601852 intron bl + chr2R_9_20600001 chr2R_20600001 RAL-21 862 chr2R 20739432 20739474 chr2R 20744220 20744243 F-element 4 4778 1.0 2.5 1.8 1.4 4811 chr2R 20739432 intron dpr + chr2R 20741838 intron dpr + chr2R 20744243 intron dpr + chr2R_4_20740001 chr2R_20740001 RAL-21 863 chr2R 20783300 20783325 chr2R 20788086 20788114 F-element 6 4789 4.0 5.5 4.8 1.0 4814 chr2R 20783300 intergenic not near genes chr2R 20785707 intergenic not near genes chr2R 20788114 intergenic CG43666 - chr2R_6_20785001 chr2R_20785001 RAL-21 864 chr2R 20838062 20838074 chr2R 20838163 20838175 4 100 0.0 5.0 2.5 1.1 113 chr2R 20838062 intron CR44667 + chr2R 20838118 intron CR44667 + chr2R 20838175 intron CR44667 + chr2R_4_20835001 chr2R_20835001 RAL-21 865 chr2R 21115066 21115088 chr2R 21115540 21115557 5 473 3.0 4.0 3.5 1.1 491 chr2R 21115066 intron ktub + chr2R 21115312 intron ktub + chr2R 21115557 intron ktub + chr2R_5_21115001 chr2R_21115001 RAL-21 866 chr2R 21136877 21136918 chr2R 21136981 21137022 10 103 1.0 5.5 3.2 2.4 145 chr2R 21136877 intron Magi - chr2R 21136950 intron Magi - chr2R 21137022 intron Magi - chr2R_10_21135001 chr2R_21135001 RAL-21 867 chr2R 21148954 21148999 chr2R 21149109 21149154 16 154 6.0 3.0 4.5 2.9 200 chr2R 21148954 3` UTR CG30389 - chr2R 21149054 3` UTR CG30389 - chr2R 21149154 3` UTR CG30389 - chr2R_16_21145001 chr2R_21145001 RAL-21 868 chr2R 21151102 21151145 chr2R 21153755 21153798 opus 13 2652 4.5 5.0 4.8 2.2 2696 chr2R 21151102 intron CG30389 - chr2R 21152450 intron CG30389 - chr2R 21153798 intron CG30389 - chr2R_13_21150001 chr2R_21150001 RAL-21 869 chr2R 21178662 21178699 chr2R 21178750 21178797 5 90 3.5 0.5 2.0 1.7 135 chr2R 21178662 intron Pu + chr2R 21178730 intron Pu + chr2R 21178797 intron Pu + chr2R_5_21175001 chr2R_21175001 RAL-21 870 chr2R 21243398 21243436 chr2R 21243575 21243613 7 177 1.5 1.5 1.5 2.8 215 chr2R 21243398 intron ASPP - chr2R 21243506 intron ASPP - chr2R 21243613 intron ASPP - chr2R_7_21240001 chr2R_21240001 RAL-21 871 chr2R 21252280 21252313 chr2R 21252599 21252601 9 313 2.0 3.0 2.5 2.6 321 chr2R 21252280 intergenic not near genes chr2R 21252440 intergenic not near genes chr2R 21252601 intergenic not near genes chr2R_9_21250001 chr2R_21250001 RAL-21 872 chr2R 21417023 21417039 chr2R 21417122 21417123 6 96 2.5 6.0 4.2 1.2 100 chr2R 21417023 intron Sdc - chr2R 21417073 intron Sdc - chr2R 21417123 intron Sdc - chr2R_6_21415001 chr2R_21415001 RAL-21 873 chr2R 21417043 21417067 chr2R 21417113 21417162 6 92 1.0 4.5 2.8 1.6 119 chr2R 21417043 intron Sdc - chr2R 21417102 intron Sdc - chr2R 21417162 intron Sdc - chr2R_6_21415001 chr2R_21415001 RAL-21 874 chr2R 21442662 21442713 chr2R 21442766 21442817 21 99 2.5 4.5 3.5 4.7 155 chr2R 21442662 intron Sdc - chr2R 21442740 intron Sdc - chr2R 21442817 intron Sdc - chr2R_21_21440001 chr2R_21440001 RAL-21 875 chr2R 21540668 21540694 chr2R 21540906 21540932 5 238 2.5 1.0 1.8 1.8 264 chr2R 21540668 intron Egfr + chr2R 21540800 intron Egfr + chr2R 21540932 intron Egfr + chr2R_5_21540001 chr2R_21540001 RAL-21 876 chr2R 21585216 21585248 chr2R 21585313 21585347 11 98 0.5 3.5 2.0 3.7 131 chr2R 21585216 3` UTR CG30222 + chr2R 21585282 3` UTR CG30222 + chr2R 21585347 3` UTR CG30222 + chr2R_11_21585001 chr2R_21585001 RAL-21 877 chr2R 21721563 21721608 chr2R 21721671 21721715 8 103 1.5 0.0 0.8 4.4 152 chr2R 21721563 intron LBR + chr2R 21721639 intron LBR + chr2R 21721715 intron LBR + chr2R_8_21720001 chr2R_21720001 RAL-21 878 chr2R 21726683 21726687 chr2R 21726801 21726805 4 118 6.0 0.0 3.0 1.0 122 chr2R 21726683 intergenic not near genes chr2R 21726744 intergenic not near genes chr2R 21726805 intergenic not near genes chr2R_4_21725001 chr2R_21725001 RAL-21 879 chr2R 21753068 21753098 chr2R 21753573 21753584 roo 5 501 4.0 4.0 4.0 1.0 516 chr2R 21753068 intergenic not near genes chr2R 21753326 intergenic not near genes chr2R 21753584 intergenic not near genes chr2R_5_21750001 chr2R_21750001 RAL-21 880 chr2R 21775453 21775465 chr2R 21775836 21775848 4 383 5.0 4.0 4.5 0.7 395 chr2R 21775453 intergenic not near genes chr2R 21775650 intergenic not near genes chr2R 21775848 intergenic not near genes chr2R_4_21775001 chr2R_21775001 RAL-21 881 chr2R 21809506 21809544 chr2R 21817766 21817804 roo 10 8259 5.5 3.5 4.5 1.8 8298 chr2R 21809506 intergenic not near genes chr2R 21813655 intergenic not near genes chr2R 21817804 intergenic not near genes chr2R_10_21810001 chr2R_21810001 RAL-21 882 chr2R 21857333 21857359 chr2R 21857444 21857469 5 111 5.0 2.0 3.5 1.1 136 chr2R 21857333 intergenic not near genes chr2R 21857401 intergenic not near genes chr2R 21857469 intergenic not near genes chr2R_5_21855001 chr2R_21855001 RAL-21 883 chr2R 21886124 21886144 chr2R 21886223 21886243 5 99 6.0 0.5 3.2 1.2 119 chr2R 21886124 intron Fili + chr2R 21886184 intron Fili + chr2R 21886243 intron Fili + chr2R_5_21885001 chr2R_21885001 RAL-21 884 chr2R 21906250 21906298 chr2R 21906371 21906419 9 121 2.0 2.0 2.0 3.0 169 chr2R 21906250 intron Fili + chr2R 21906334 intron Fili + chr2R 21906419 intron Fili + chr2R_9_21905001 chr2R_21905001 RAL-21 885 chr2R 21927943 21927981 chr2R 21928438 21928476 4 495 0.5 4.0 2.2 1.2 533 chr2R 21927943 intron Fili + chr2R 21928210 intron Fili + chr2R 21928476 intron Fili + chr2R_4_21925001 chr2R_21925001 RAL-21 886 chr2R 21938085 21938229 chr2R 21938182 21938331 22 96 0.5 1.0 0.8 12.2 246 chr2R 21938085 intron Fili + chr2R 21938208 intron Fili + chr2R 21938331 intron Fili + chr2R_22_21935001 chr2R_21935001 RAL-21 887 chr2R 22012965 22012992 chr2R 22013078 22013105 8 111 2.5 0.0 1.2 3.6 140 chr2R 22012965 intron CG34370 - chr2R 22013035 intron CG34370 - chr2R 22013105 intron CG34370 - chr2R_8_22010001 chr2R_22010001 RAL-21 888 chr2R 22029504 22029535 chr2R 22029602 22029633 9 97 5.0 0.0 2.5 2.6 129 chr2R 22029504 intron CG34370 - chr2R 22029568 intron CG34370 - chr2R 22029633 intron CG34370 - chr2R_9_22025001 chr2R_22025001 RAL-21 889 chr2R 22037755 22037800 chr2R 22037857 22037902 8 99 5.0 0.0 2.5 2.3 147 chr2R 22037755 intron CG34370 - chr2R 22037828 intron CG34370 - chr2R 22037902 intron CG34370 - chr2R_8_22035001 chr2R_22035001 RAL-21 890 chr2R 22063315 22063341 chr2R 22063751 22063777 8 436 5.0 2.5 3.8 1.7 462 chr2R 22063315 intron Snp + chr2R 22063546 intron Snp + chr2R 22063777 intron Snp + chr2R_8_22060001 chr2R_22060001 RAL-21 891 chr2R 22072684 22072711 chr2R 22072789 22072816 7 102 2.0 7.0 4.5 1.3 132 chr2R 22072684 intron CG11474 - chr2R 22072750 intron CG11474 - chr2R 22072816 exon CG11474 - chr2R_7_22070001 chr2R_22070001 RAL-21 892 chr2R 22095594 22095601 chr2R 22095694 22095701 7 100 4.0 5.0 4.5 1.3 107 chr2R 22095594 intron CG11073 - chr2R 22095648 intron CG11073 - chr2R 22095701 intron CG11073 - chr2R_7_22095001 chr2R_22095001 RAL-21 893 chr2R 22182906 22182932 chr2R 22183010 22183036 11 104 0.0 4.0 2.0 3.7 130 chr2R 22182906 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22182971 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183036 intergenic MED16 +,CG11170 -,CG11275 + chr2R_11_22180001 chr2R_22180001 RAL-21 894 chr2R 22349708 22349720 chr2R 22351490 22351524 jockey 4 1798 2.5 5.0 3.8 0.8 1816 chr2R 22349708 intron Liprin-gamma - chr2R 22350616 intron Liprin-gamma - chr2R 22351524 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-21 895 chr2R 22360364 22360390 chr2R 22360817 22360829 jockey 8 449 6.5 3.5 5.0 1.3 465 chr2R 22360364 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_8_22360001 chr2R_22360001 RAL-21 896 chr2R 22380346 22380391 chr2R 22380457 22380502 18 111 4.5 2.0 3.2 4.3 156 chr2R 22380346 intron wrapper + chr2R 22380424 intron wrapper + chr2R 22380502 intron wrapper + chr2R_18_22380001 chr2R_22380001 RAL-21 897 chr2R 22453201 22453220 chr2R 22453324 22453343 6 122 0.0 6.5 3.2 1.4 142 chr2R 22453201 intergenic not near genes chr2R 22453272 intergenic not near genes chr2R 22453343 intergenic not near genes chr2R_6_22450001 chr2R_22450001 RAL-21 898 chr2R 22460364 22460401 chr2R 22460463 22460500 10 96 5.0 3.0 4.0 2.0 136 chr2R 22460364 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460500 intron CG10384 + chr2R_10_22460001 chr2R_22460001 RAL-21 899 chr2R 22465300 22465345 chr2R 22465519 22465564 BS 14 219 4.5 7.0 5.8 2.1 264 chr2R 22465300 intron CG10384 + chr2R 22465432 intron CG10384 + chr2R 22465564 intron CG10384 + chr2R_14_22465001 chr2R_22465001 RAL-21 900 chr2R 22545621 22545644 chr2R 22545700 22545743 5 95 4.5 2.5 3.5 1.1 122 chr2R 22545621 intron px - chr2R 22545682 intron px - chr2R 22545743 intron px - chr2R_5_22545001 chr2R_22545001 RAL-21 901 chr2R 22605919 22605935 chr2R 22606018 22606018 7 101 5.0 4.0 4.5 1.3 99 chr2R 22605919 intron RpS16 + chr2R 22605968 intron RpS16 + chr2R 22606018 intron RpS16 + chr2R_7_22605001 chr2R_22605001 RAL-21 902 chr2R 22654353 22654368 chr2R 22654453 22654460 5 99 4.0 2.5 3.2 1.2 107 chr2R 22654353 exon Cyp6d2 - chr2R 22654406 exon Cyp6d2 - chr2R 22654460 5` UTR Cyp6d2 - chr2R_5_22650001 chr2R_22650001 RAL-21 903 chr2R 22666728 22666781 chr2R 22666824 22666877 16 95 0.0 0.0 0.0 16.0 149 chr2R 22666728 5` UTR CR42868 + chr2R 22666802 intergenic CR42868 +,CR45269 -,CG30273 + chr2R 22666877 intergenic CR42868 +,CR45269 -,CG30273 + chr2R_16_22665001 chr2R_22665001 RAL-21 904 chr2R 22774956 22775001 chr2R 22775384 22775440 jockey 12 436 3.5 1.5 2.5 3.4 484 chr2R 22774956 intron CG42260 - chr2R 22775198 intron CG42260 - chr2R 22775440 intron CG42260 - chr2R_12_22775001 chr2R_22775001 RAL-21 905 chr2R 22843012 22843044 chr2R 22844992 22845026 flea 17 1982 6.0 4.5 5.2 2.7 2014 chr2R 22843012 intergenic CG9826 + chr2R 22844019 intergenic not near genes chr2R 22845026 intergenic not near genes chr2R_17_22840001 chr2R_22840001 RAL-21 906 chr2R 22941798 22941849 chr2R 22941897 22941948 17 98 5.5 4.5 5.0 2.8 150 chr2R 22941798 intergenic CG42694 + chr2R 22941873 intergenic CG42694 + chr2R 22941948 5` UTR CG42694 + chr2R_17_22940001 chr2R_22940001 RAL-21 907 chr2R 22945044 22945082 chr2R 22945174 22945215 9 133 5.0 5.0 5.0 1.5 171 chr2R 22945044 exon CG42694 + chr2R 22945130 3` UTR CG42694 + chr2R 22945215 intergenic CG42694 + chr2R_9_22945001 chr2R_22945001 RAL-21 908 chr2R 22988293 22988314 chr2R 22988393 22988412 4 96 4.5 6.5 5.5 0.6 119 chr2R 22988293 intron twi + chr2R 22988352 intron twi + chr2R 22988412 intron twi + chr2R_4_22985001 chr2R_22985001 RAL-21 909 chr2R 22993415 22993445 chr2R 22993609 22993622 6 189 2.0 4.5 3.2 1.4 207 chr2R 22993415 intron twi + chr2R 22993518 intron twi + chr2R 22993622 intron twi + chr2R_6_22990001 chr2R_22990001 RAL-21 910 chr2R 23052643 23052683 chr2R 23052739 23052772 12 95 3.5 4.5 4.0 2.4 129 chr2R 23052643 intergenic not near genes chr2R 23052708 intergenic not near genes chr2R 23052772 intergenic not near genes chr2R_12_23050001 chr2R_23050001 RAL-21 911 chr2R 23155702 23155749 chr2R 23155848 23155893 9 145 1.5 5.0 3.2 2.1 191 chr2R 23155702 intron CG9899 + chr2R 23155798 intron CG9899 + chr2R 23155893 intron CG9899 + chr2R_9_23155001 chr2R_23155001 RAL-21 912 chr2R 23158327 23158355 chr2R 23158424 23158452 4 97 6.5 7.0 6.8 0.5 125 chr2R 23158327 intron CG9899 + chr2R 23158390 intron CG9899 + chr2R 23158452 intron CG9899 + chr2R_4_23155001 chr2R_23155001 RAL-21 913 chr2R 23356258 23356309 chr2R 23356367 23356418 13 104 2.5 2.5 2.5 3.7 160 chr2R 23356258 3` UTR Rpi + chr2R 23356338 3` UTR Rpi + chr2R 23356418 3` UTR,3` UTR Rpi +,CG3500 - chr2R_13_23355001 chr2R_23355001 RAL-21 914 chr2R 23402590 23402640 chr2R 23407686 23407736 flea 9 5095 2.5 5.5 4.0 1.8 5146 chr2R 23402590 intergenic CG3520 - chr2R 23405163 intergenic not near genes chr2R 23407736 intergenic not near genes chr2R_9_23405001 chr2R_23405001 RAL-21 915 chr2R 23475618 23475658 chr2R 23475737 23475766 8 117 1.5 0.5 1.0 4.0 148 chr2R 23475618 intron CG43795 + chr2R 23475692 intron CG43795 + chr2R 23475766 intron,3` UTR CG43795 +,CG13557 - chr2R_8_23475001 chr2R_23475001 RAL-21 916 chr2R 23487432 23487474 chr2R 23487534 23487552 7 98 3.0 3.0 3.0 1.8 120 chr2R 23487432 intron CG43795 + chr2R 23487492 intron CG43795 + chr2R 23487552 intron CG43795 + chr2R_7_23485001 chr2R_23485001 RAL-21 917 chr2R 23518179 23518189 chr2R 23518274 23518287 6 98 8.0 0.0 4.0 1.2 108 chr2R 23518179 intergenic not near genes chr2R 23518233 intergenic not near genes chr2R 23518287 intergenic not near genes chr2R_6_23515001 chr2R_23515001 RAL-21 918 chr2R 23607016 23607192 chr2R 23607117 23607305 27 106 1.5 2.0 1.8 9.6 289 chr2R 23607016 intron CG17664 - chr2R 23607160 intron CG17664 - chr2R 23607305 intron CG17664 - chr2R_27_23605001 chr2R_23605001 RAL-21 919 chr2R 23653965 23654003 chr2R 23654053 23654100 4 95 4.5 3.5 4.0 0.8 135 chr2R 23653965 3` UTR retn + chr2R 23654032 3` UTR retn + chr2R 23654100 3` UTR retn + chr2R_4_23650001 chr2R_23650001 RAL-21 920 chr2R 23718294 23718300 chr2R 23718450 23718459 6 152 27.0 23.5 25.2 0.2 165 chr2R 23718294 intron Sesn + chr2R 23718376 intron Sesn + chr2R 23718459 intron Sesn + chr2R_6_23715001 chr2R_23715001 RAL-21 921 chr2R 23771291 23771299 chr2R 23771389 23771397 4 98 1.0 1.0 1.0 2.0 106 chr2R 23771291 intron CG9850 - chr2R 23771344 intron CG9850 - chr2R 23771397 intron CG9850 - chr2R_4_23770001 chr2R_23770001 RAL-21 922 chr2R 23865807 23865850 chr2R 23865909 23865936 10 98 2.5 2.5 2.5 2.9 129 chr2R 23865807 intron CG5569 + chr2R 23865872 intron CG5569 + chr2R 23865936 intron CG5569 + chr2R_10_23865001 chr2R_23865001 RAL-21 923 chr2R 23914291 23914313 chr2R 23921935 23921957 412 4 7644 4.0 1.5 2.8 1.1 7666 chr2R 23914291 exon kcc + chr2R 23918124 intron kcc + chr2R 23921957 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-21 924 chr2R 23914314 23914330 chr2R 23921928 23921973 412 4 7633 1.0 1.5 1.2 1.8 7659 chr2R 23914314 exon kcc + chr2R 23918144 intron kcc + chr2R 23921973 exon kcc + chr2R_4_23915001 chr2R_23915001 RAL-21 925 chr2R 24031362 24031412 chr2R 24031466 24031516 16 103 5.5 4.5 5.0 2.7 154 chr2R 24031362 5` UTR CG30172 - chr2R 24031439 intergenic CG30172 -,Chi - chr2R 24031516 intergenic Chi -,CG30172 - chr2R_16_24030001 chr2R_24030001 RAL-21 926 chr2R 24073497 24073546 chr2R 24073604 24073654 7 102 3.0 3.5 3.2 1.7 157 chr2R 24073497 3` UTR CG3209 + chr2R 24073576 intergenic CG3209 + chr2R 24073654 intergenic CG3209 + chr2R_7_24070001 chr2R_24070001 RAL-21 927 chr2R 24177216 24177266 chr2R 24184721 24184771 412 19 7505 5.0 5.5 5.2 3.1 7555 chr2R 24177216 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184771 3` UTR Nop60B + chr2R_19_24180001 chr2R_24180001 RAL-21 928 chr2R 24351392 24351440 chr2R 24351493 24351541 13 100 4.0 3.5 3.8 2.7 149 chr2R 24351392 intron bs + chr2R 24351466 intron bs + chr2R 24351541 intron,3` UTR bs +,CR44811 - chr2R_13_24350001 chr2R_24350001 RAL-21 929 chr2R 24353413 24353444 chr2R 24361790 24361824 roo 9 8381 2.5 2.5 2.5 2.6 8411 chr2R 24353413 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361824 intron,intron bs +,CR44811 - chr2R_9_24355001 chr2R_24355001 RAL-21 930 chr2R 24383805 24383855 chr2R 24383906 24383935 14 99 1.5 1.0 1.2 6.4 130 chr2R 24383805 intron mAChR-A - chr2R 24383870 intron mAChR-A - chr2R 24383935 exon mAChR-A - chr2R_14_24380001 chr2R_24380001 RAL-21 931 chr2R 24629082 24629113 chr2R 24629296 24629312 4 210 1.0 1.5 1.2 1.8 230 chr2R 24629082 intron CG13594 - chr2R 24629197 intron CG13594 - chr2R 24629312 intron CG13594 - chr2R_4_24625001 chr2R_24625001 RAL-21 932 chr2R 24633973 24634023 chr2R 24634074 24634124 8 91 3.0 2.0 2.5 2.3 151 chr2R 24633973 intron CG13594 - chr2R 24634048 intron CG13594 - chr2R 24634124 intron CG13594 - chr2R_8_24630001 chr2R_24630001 RAL-21 933 chr2R 24848636 24848683 chr2R 24848740 24848787 18 103 0.0 5.5 2.8 4.7 151 chr2R 24848636 intergenic CG3650 + chr2R 24848712 intergenic CG3650 + chr2R 24848787 intergenic CG3650 + chr2R_18_24845001 chr2R_24845001 RAL-21 934 chr2R 24894741 24894785 chr2R 24894846 24894890 12 104 2.0 4.5 3.2 2.9 149 chr2R 24894741 intron NaCP60E + chr2R 24894816 intron NaCP60E + chr2R 24894890 intron NaCP60E + chr2R_12_24890001 chr2R_24890001 RAL-21 935 chr2R 25061335 25061361 chr2R 25061416 25061422 10 94 1.0 3.0 2.0 3.3 87 chr2R 25061335 intergenic not near genes chr2R 25061378 intergenic not near genes chr2R 25061422 intergenic not near genes chr2R_10_25060001 chr2R_25060001 RAL-21 936 chr2R 25081713 25081763 chr2R 25081881 25081931 19 167 5.5 1.5 3.5 4.2 218 chr2R 25081713 intron gol - chr2R 25081822 intron gol - chr2R 25081931 intron gol - chr2R_19_25080001 chr2R_25080001 RAL-21 937 chr2R 25101258 25101305 chr2R 25101380 25101410 12 120 5.0 2.0 3.5 2.7 152 chr2R 25101258 intron lov - chr2R 25101334 intron lov - chr2R 25101410 intron lov - chr2R_12_25100001 chr2R_25100001 RAL-21 938 chr2R 25102511 25102554 chr2R 25102695 25102731 10 186 4.5 2.0 3.2 2.4 220 chr2R 25102511 intron lov - chr2R 25102621 intron lov - chr2R 25102731 intron lov - chr2R_10_25100001 chr2R_25100001 RAL-21 939 chr2R 25104766 25104806 chr2R 25104911 25104945 11 144 3.5 3.0 3.2 2.6 179 chr2R 25104766 intron lov - chr2R 25104856 intron lov - chr2R 25104945 intron lov - chr2R_11_25100001 chr2R_25100001 RAL-21 940 chr2R 25130990 25131027 chr2R 25131087 25131124 10 97 7.0 2.5 4.8 1.7 134 chr2R 25130990 intron lov - chr2R 25131057 intron lov - chr2R 25131124 intron lov - chr2R_10_25130001 chr2R_25130001 RAL-21 941 chr2R 25141647 25141681 chr2R 25159345 25159391 roo 11 17708 4.5 6.0 5.2 1.8 17744 chr2R 25141647 intergenic not near genes chr2R 25150519 intergenic not near genes chr2R 25159391 intergenic not near genes chr2R_11_25150001 chr2R_25150001 RAL-21 942 chr2R 25171481 25171515 chr2R 25171578 25171612 8 97 3.0 8.0 5.5 1.2 131 chr2R 25171481 intergenic not near genes chr2R 25171546 intergenic not near genes chr2R 25171612 intergenic not near genes chr2R_8_25170001 chr2R_25170001 RAL-21 943 chr2R 25193327 25193364 chr2R 25193489 25193528 6 163 2.5 2.0 2.2 1.9 201 chr2R 25193327 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193528 intron CG9380 - chr2R_6_25190001 chr2R_25190001 RAL-21 944 chr2R 25243984 25244010 chr2R 25244054 25244108 7 94 2.5 1.5 2.0 2.3 124 chr2R 25243984 intron CG9380 - chr2R 25244046 intron CG9380 - chr2R 25244108 intron CG9380 - chr2R_7_25240001 chr2R_25240001 RAL-21 945 chr2R 25253426 25253478 chr2R 25253522 25253575 10 92 4.0 3.0 3.5 2.2 149 chr2R 25253426 intron,intron CG9380 -,CG30428 + chr2R 25253500 intron,intron CG9380 -,CG30428 + chr2R 25253575 intron,intron CG9380 -,CG30428 + chr2R_10_25250001 chr2R_25250001 RAL-21 946 chr3L 62954 62992 chr3L 63346 63383 12 388 3.0 5.0 4.0 2.4 429 chr3L 62954 intergenic not near genes chr3L 63168 intergenic not near genes chr3L 63383 intergenic not near genes chr3L_12_60001 chr3L_60001 RAL-21 947 chr3L 68961 69014 chr3L 69068 69120 13 101 1.5 1.0 1.2 5.9 159 chr3L 68961 3` UTR Lsp1gamma + chr3L 69040 intergenic Lsp1gamma +,CR44510 + chr3L 69120 intergenic CR44510 +,Lsp1gamma + chr3L_13_65001 chr3L_65001 RAL-21 948 chr3L 71915 71926 chr3L 72018 72029 6 103 5.0 6.5 5.8 0.9 114 chr3L 71915 intergenic CR43988 - chr3L 71972 intergenic CR43988 - chr3L 72029 intergenic CR43988 - chr3L_6_70001 chr3L_70001 RAL-21 949 chr3L 71935 71950 chr3L 72016 72053 6 99 3.5 5.5 4.5 1.1 118 chr3L 71935 intergenic CR43988 - chr3L 71994 intergenic CR43988 - chr3L 72053 intergenic CR43988 - chr3L_6_70001 chr3L_70001 RAL-21 950 chr3L 110192 110234 chr3L 119378 119421 roo 14 9186 4.5 2.5 3.5 3.1 9229 chr3L 110192 intergenic not near genes chr3L 114806 intergenic not near genes chr3L 119421 intergenic not near genes chr3L_14_110001 chr3L_110001 RAL-21 951 chr3L 402681 402706 chr3L 409747 409759 297 4 7066 1.0 5.0 3.0 1.0 7078 chr3L 402681 intergenic not near genes chr3L 406220 intergenic not near genes chr3L 409759 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-21 952 chr3L 421042 421082 chr3L 421158 421179 9 113 3.0 3.0 3.0 2.2 137 chr3L 421042 intergenic not near genes chr3L 421110 intergenic not near genes chr3L 421179 intergenic not near genes chr3L_9_420001 chr3L_420001 RAL-21 953 chr3L 507031 507082 chr3L 507137 507186 11 104 5.0 0.5 2.8 2.9 155 chr3L 507031 intron klar - chr3L 507108 intron klar - chr3L 507186 intron klar - chr3L_11_505001 chr3L_505001 RAL-21 954 chr3L 514260 514301 chr3L 514357 514398 10 94 4.5 6.5 5.5 1.5 138 chr3L 514260 intron klar - chr3L 514329 intron klar - chr3L 514398 intron klar - chr3L_10_510001 chr3L_510001 RAL-21 955 chr3L 561465 561495 chr3L 561562 561592 7 97 4.0 0.0 2.0 2.3 127 chr3L 561465 intron hipk + chr3L 561528 intron hipk + chr3L 561592 intron hipk + chr3L_7_560001 chr3L_560001 RAL-21 956 chr3L 592946 592967 chr3L 593042 593063 9 96 4.0 6.5 5.2 1.5 117 chr3L 592946 intergenic MED14 + chr3L 593004 intergenic MED14 + chr3L 593063 intergenic MED14 + chr3L_9_590001 chr3L_590001 RAL-21 957 chr3L 606872 606908 chr3L 606968 607007 4 96 6.5 0.0 3.2 1.0 135 chr3L 606872 intergenic Reg-2 - chr3L 606940 intergenic Reg-2 - chr3L 607007 intergenic Reg-2 - chr3L_4_605001 chr3L_605001 RAL-21 958 chr3L 651373 651385 chr3L 651481 651493 8 108 7.0 6.5 6.8 1.0 120 chr3L 651373 intergenic Gale +,CG3402 - chr3L 651433 intergenic CG3402 -,Gale + chr3L 651493 intergenic CG3402 -,Gale + chr3L_8_650001 chr3L_650001 RAL-21 959 chr3L 651386 651419 chr3L 651474 651522 13 106 3.0 5.5 4.2 2.5 136 chr3L 651386 intergenic Gale +,CG3402 - chr3L 651454 intergenic CG3402 -,Gale + chr3L 651522 intergenic CG3402 -,Gale + chr3L_13_650001 chr3L_650001 RAL-21 960 chr3L 705890 705917 chr3L 705998 706033 12 115 9.5 4.0 6.8 1.5 143 chr3L 705890 intergenic CG13895 -,CR44514 + chr3L 705962 3` UTR CG13895 - chr3L 706033 3` UTR CG13895 - chr3L_12_705001 chr3L_705001 RAL-21 961 chr3L 705921 705928 chr3L 705993 706044 8 105 6.0 3.0 4.5 1.5 123 chr3L 705921 intergenic CG13895 -,CR44514 + chr3L 705982 3` UTR CG13895 - chr3L 706044 3` UTR CG13895 - chr3L_8_705001 chr3L_705001 RAL-21 962 chr3L 761176 761218 chr3L 761273 761310 6 95 2.5 2.5 2.5 1.7 134 chr3L 761176 intergenic not near genes chr3L 761243 intergenic not near genes chr3L 761310 intergenic not near genes chr3L_6_760001 chr3L_760001 RAL-21 963 chr3L 780629 780664 chr3L 780735 780770 14 105 3.0 4.5 3.8 2.9 141 chr3L 780629 intergenic not near genes chr3L 780700 intergenic not near genes chr3L 780770 intergenic not near genes chr3L_14_780001 chr3L_780001 RAL-21 964 chr3L 789902 789943 chr3L 790401 790447 roo 15 504 5.5 8.5 7.0 1.9 545 chr3L 789902 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790447 intergenic not near genes chr3L_15_790001 chr3L_790001 RAL-21 965 chr3L 812163 812173 chr3L 812310 812320 4 146 1.5 4.0 2.8 1.1 157 chr3L 812163 intergenic not near genes chr3L 812242 intergenic not near genes chr3L 812320 intergenic not near genes chr3L_4_810001 chr3L_810001 RAL-21 966 chr3L 899288 899320 chr3L 899386 899418 10 92 0.0 1.0 0.5 6.7 130 chr3L 899288 intergenic not near genes chr3L 899353 intergenic not near genes chr3L 899418 intergenic not near genes chr3L_10_895001 chr3L_895001 RAL-21 967 chr3L 899995 900017 chr3L 900096 900121 6 104 0.0 6.0 3.0 1.5 126 chr3L 899995 intergenic not near genes chr3L 900058 intergenic not near genes chr3L 900121 intergenic not near genes chr3L_6_900001 chr3L_900001 RAL-21 968 chr3L 901413 901436 chr3L 901511 901513 4 96 4.5 5.0 4.8 0.7 100 chr3L 901413 intergenic not near genes chr3L 901463 intergenic not near genes chr3L 901513 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-21 969 chr3L 925161 925206 chr3L 932607 932652 mdg1 12 7444 3.0 2.5 2.8 3.2 7491 chr3L 925161 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932652 intron Glut1 + chr3L_12_925001 chr3L_925001 RAL-21 970 chr3L 933904 933935 chr3L 934018 934058 13 121 5.5 5.5 5.5 2.0 154 chr3L 933904 intron Glut1 + chr3L 933981 intron Glut1 + chr3L 934058 intron Glut1 + chr3L_13_930001 chr3L_930001 RAL-21 971 chr3L 939766 939787 chr3L 940899 940899 jockey 5 1130 1.5 5.0 3.2 1.2 1133 chr3L 939766 intron Glut1 + chr3L 940332 intron Glut1 + chr3L 940899 intron Glut1 + chr3L_5_940001 chr3L_940001 RAL-21 972 chr3L 947741 947747 chr3L 947833 947847 4 100 0.5 3.5 2.0 1.3 106 chr3L 947741 intron Glut1 + chr3L 947794 intron Glut1 + chr3L 947847 intron Glut1 + chr3L_4_945001 chr3L_945001 RAL-21 973 chr3L 963602 963634 chr3L 963841 963880 9 239 1.5 4.5 3.0 2.2 278 chr3L 963602 intron Glut1 + chr3L 963741 intron Glut1 + chr3L 963880 intron Glut1 + chr3L_9_960001 chr3L_960001 RAL-21 974 chr3L 1033316 1033345 chr3L 1033438 1033461 4 123 0.0 0.0 0.0 4.0 145 chr3L 1033316 intron trio - chr3L 1033388 intron trio - chr3L 1033461 intron trio - chr3L_4_1030001 chr3L_1030001 RAL-21 975 chr3L 1095028 1095042 chr3L 1095102 1095135 4 80 4.0 3.5 3.8 0.8 107 chr3L 1095028 intron bab1 - chr3L 1095082 intron bab1 - chr3L 1095135 intron bab1 - chr3L_4_1095001 chr3L_1095001 RAL-21 976 chr3L 1154119 1154161 chr3L 1163289 1163330 roo 5 9169 1.5 3.0 2.2 1.6 9211 chr3L 1154119 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163330 intron bab2 - chr3L_5_1155001 chr3L_1155001 RAL-21 977 chr3L 1219595 1219615 chr3L 1227342 1227359 412 5 7745 0.0 3.5 1.8 1.8 7764 chr3L 1219595 intron mwh + chr3L 1223477 intron mwh + chr3L 1227359 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-21 978 chr3L 1260144 1260161 chr3L 1260244 1260261 4 100 4.0 6.0 5.0 0.7 117 chr3L 1260144 intron CG9134 + chr3L 1260202 intron CG9134 + chr3L 1260261 intron CG9134 + chr3L_4_1260001 chr3L_1260001 RAL-21 979 chr3L 1396724 1396759 chr3L 1396828 1396863 13 103 8.0 10.0 9.0 1.3 139 chr3L 1396724 intron Ptp61F - chr3L 1396794 intron Ptp61F - chr3L 1396863 intron Ptp61F - chr3L_13_1395001 chr3L_1395001 RAL-21 980 chr3L 1415756 1415808 chr3L 1415858 1415884 8 94 0.5 1.5 1.0 4.0 128 chr3L 1415756 intron Ptp61F - chr3L 1415820 intron Ptp61F - chr3L 1415884 intron Ptp61F - chr3L_8_1415001 chr3L_1415001 RAL-21 981 chr3L 1463420 1463440 chr3L 1463497 1463532 4 90 5.5 1.5 3.5 0.9 112 chr3L 1463420 intron Ptp61F - chr3L 1463476 intron Ptp61F - chr3L 1463532 intron Ptp61F - chr3L_4_1460001 chr3L_1460001 RAL-21 982 chr3L 1501985 1502020 chr3L 1502080 1502115 8 96 1.0 2.0 1.5 3.2 130 chr3L 1501985 intron pUf68 - chr3L 1502050 intron pUf68 - chr3L 1502115 intron pUf68 - chr3L_8_1500001 chr3L_1500001 RAL-21 983 chr3L 1505996 1506030 chr3L 1513603 1513647 17.6 15 7616 4.5 4.5 4.5 2.7 7651 chr3L 1505996 intron,intron Psa +,cue - chr3L 1509822 intron,intron Psa +,cue - chr3L 1513647 intron,intron Psa +,cue - chr3L_15_1505001 chr3L_1505001 RAL-21 984 chr3L 1674316 1674359 chr3L 1674416 1674462 8 97 1.0 3.0 2.0 2.7 146 chr3L 1674316 intergenic CG7991 + chr3L 1674389 intergenic CG7991 + chr3L 1674462 intergenic CG7991 + chr3L_8_1670001 chr3L_1670001 RAL-21 985 chr3L 1693526 1693539 chr3L 1693624 1693647 4 102 0.0 2.5 1.2 1.8 121 chr3L 1693526 intron CG7991 + chr3L 1693586 intron CG7991 + chr3L 1693647 intron CG7991 + chr3L_4_1690001 chr3L_1690001 RAL-21 986 chr3L 1740838 1740885 chr3L 1741101 1741135 pogo 7 256 5.0 7.5 6.2 1.0 297 chr3L 1740838 intron Gk + chr3L 1740986 intron Gk + chr3L 1741135 intron Gk + chr3L_7_1740001 chr3L_1740001 RAL-21 987 chr3L 1746575 1746621 chr3L 1746688 1746737 7 113 1.5 3.5 2.5 2.0 162 chr3L 1746575 intergenic CG13921 + chr3L 1746656 intergenic CG13921 + chr3L 1746737 intergenic CG13921 + chr3L_7_1745001 chr3L_1745001 RAL-21 988 chr3L 1754673 1754717 chr3L 1754812 1754856 16 131 4.0 3.0 3.5 3.6 183 chr3L 1754673 intron Cht2 - chr3L 1754764 intron Cht2 - chr3L 1754856 intron Cht2 - chr3L_16_1750001 chr3L_1750001 RAL-21 989 chr3L 1848635 1848660 chr3L 1848752 1848777 8 117 4.5 2.5 3.5 1.8 142 chr3L 1848635 intergenic not near genes chr3L 1848706 intergenic not near genes chr3L 1848777 intergenic not near genes chr3L_8_1845001 chr3L_1845001 RAL-21 990 chr3L 1853026 1853055 chr3L 1853129 1853158 6 104 0.5 4.0 2.2 1.9 132 chr3L 1853026 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853158 intron CG13936 - chr3L_6_1850001 chr3L_1850001 RAL-21 991 chr3L 1991115 1991142 chr3L 1991213 1991240 7 98 5.0 1.5 3.2 1.7 125 chr3L 1991115 intergenic not near genes chr3L 1991178 intergenic not near genes chr3L 1991240 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-21 992 chr3L 2039421 2039468 chr3L 2039629 2039677 9 210 3.0 2.0 2.5 2.6 256 chr3L 2039421 intergenic sls - chr3L 2039549 intergenic sls - chr3L 2039677 intergenic sls - chr3L_9_2035001 chr3L_2035001 RAL-21 993 chr3L 2108232 2108279 chr3L 2113456 2113497 copia 9 5223 2.0 3.0 2.5 2.6 5265 chr3L 2108232 intron sls - chr3L 2110864 intron sls - chr3L 2113497 intron sls - chr3L_9_2110001 chr3L_2110001 RAL-21 994 chr3L 2139200 2139220 chr3L 2139296 2139321 5 99 1.5 2.5 2.0 1.7 121 chr3L 2139200 intron zormin - chr3L 2139260 intron zormin - chr3L 2139321 intron zormin - chr3L_5_2135001 chr3L_2135001 RAL-21 995 chr3L 2168764 2168806 chr3L 2168871 2168891 19 109 2.0 2.5 2.2 5.9 127 chr3L 2168764 exon CG15879 - chr3L 2168828 intron CG15879 - chr3L 2168891 intron CG15879 - chr3L_19_2165001 chr3L_2165001 RAL-21 996 chr3L 2199794 2199812 chr3L 2199890 2199908 8 96 0.0 3.5 1.8 2.9 114 chr3L 2199794 intergenic not near genes chr3L 2199851 intergenic not near genes chr3L 2199908 intergenic not near genes chr3L_8_2195001 chr3L_2195001 RAL-21 997 chr3L 2279017 2279064 chr3L 2279186 2279206 4 161 0.0 5.0 2.5 1.1 189 chr3L 2279017 intergenic not near genes chr3L 2279112 intergenic not near genes chr3L 2279206 intergenic not near genes chr3L_4_2275001 chr3L_2275001 RAL-21 998 chr3L 2307992 2308023 chr3L 2308118 2308147 8 123 5.0 4.0 4.5 1.5 155 chr3L 2307992 intergenic not near genes chr3L 2308070 intergenic not near genes chr3L 2308147 intergenic not near genes chr3L_8_2305001 chr3L_2305001 RAL-21 999 chr3L 2331562 2331615 chr3L 2331659 2331707 7 95 2.0 2.5 2.2 2.2 145 chr3L 2331562 intron MsR1 + chr3L 2331634 intron MsR1 + chr3L 2331707 intron MsR1 + chr3L_7_2330001 chr3L_2330001 RAL-21 1000 chr3L 2380328 2380371 chr3L 2380421 2380468 15 95 6.0 2.5 4.2 2.9 140 chr3L 2380328 intergenic not near genes chr3L 2380398 intergenic not near genes chr3L 2380468 intergenic not near genes chr3L_15_2380001 chr3L_2380001 RAL-21 1001 chr3L 2414453 2414489 chr3L 2414627 2414663 7 170 4.5 4.5 4.5 1.3 210 chr3L 2414453 intron CG45186 + chr3L 2414558 intron CG45186 + chr3L 2414663 intron CG45186 + chr3L_7_2410001 chr3L_2410001 RAL-21 1002 chr3L 2447484 2447537 chr3L 2456658 2456677 roo 8 9169 2.0 2.5 2.2 2.5 9193 chr3L 2447484 intron CG45186 + chr3L 2452080 intron CG45186 + chr3L 2456677 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-21 1003 chr3L 2467441 2467480 chr3L 2467551 2467597 5 116 4.5 0.0 2.2 1.6 156 chr3L 2467441 intron CG45186 + chr3L 2467519 intron CG45186 + chr3L 2467597 intron CG45186 + chr3L_5_2465001 chr3L_2465001 RAL-21 1004 chr3L 2515403 2515410 chr3L 2515505 2515512 5 102 2.5 8.0 5.2 0.8 109 chr3L 2515403 intron Spn - chr3L 2515458 intron Spn - chr3L 2515512 intron Spn - chr3L_5_2515001 chr3L_2515001 RAL-21 1005 chr3L 2533641 2533675 chr3L 2533743 2533776 8 93 2.5 4.5 3.5 1.8 135 chr3L 2533641 intron Spn - chr3L 2533708 intron Spn - chr3L 2533776 intron Spn - chr3L_8_2530001 chr3L_2530001 RAL-21 1006 chr3L 2561506 2561559 chr3L 2561603 2561656 14 93 5.5 3.0 4.2 2.7 150 chr3L 2561506 intron msn - chr3L 2561581 intron msn - chr3L 2561656 intron msn - chr3L_14_2560001 chr3L_2560001 RAL-21 1007 chr3L 2624369 2624419 chr3L 2624531 2624579 19 161 1.5 1.0 1.2 8.6 210 chr3L 2624369 intron Pxn - chr3L 2624474 intron Pxn - chr3L 2624579 intron Pxn - chr3L_19_2620001 chr3L_2620001 RAL-21 1008 chr3L 2682969 2683022 chr3L 2683066 2683120 13 98 5.0 4.0 4.5 2.4 151 chr3L 2682969 intron Fife - chr3L 2683044 intron Fife - chr3L 2683120 intron Fife - chr3L_13_2680001 chr3L_2680001 RAL-21 1009 chr3L 2683925 2683972 chr3L 2684021 2684068 12 96 4.5 3.0 3.8 2.5 143 chr3L 2683925 intron Fife - chr3L 2683996 intron Fife - chr3L 2684068 intron Fife - chr3L_12_2680001 chr3L_2680001 RAL-21 1010 chr3L 2726042 2726064 chr3L 2726371 2726393 5 328 3.5 3.0 3.2 1.2 351 chr3L 2726042 intron Mrtf - chr3L 2726218 intron Mrtf - chr3L 2726393 intron Mrtf - chr3L_5_2725001 chr3L_2725001 RAL-21 1011 chr3L 2795703 2795744 chr3L 2795846 2795854 7 134 1.0 2.5 1.8 2.5 151 chr3L 2795703 intron CG43444 - chr3L 2795778 intron CG43444 - chr3L 2795854 intron CG43444 - chr3L_7_2795001 chr3L_2795001 RAL-21 1012 chr3L 2841596 2841636 chr3L 2841690 2841745 5 105 0.5 2.5 1.5 2.0 149 chr3L 2841596 intron CG43444 - chr3L 2841670 intron CG43444 - chr3L 2841745 intron CG43444 - chr3L_5_2840001 chr3L_2840001 RAL-21 1013 chr3L 2882099 2882143 chr3L 2882200 2882239 5 98 2.0 6.0 4.0 1.0 140 chr3L 2882099 intergenic not near genes chr3L 2882169 intergenic not near genes chr3L 2882239 intergenic not near genes chr3L_5_2880001 chr3L_2880001 RAL-21 1014 chr3L 2899563 2899605 chr3L 2899696 2899738 11 132 5.5 4.5 5.0 1.8 175 chr3L 2899563 intron Shab + chr3L 2899650 intron Shab + chr3L 2899738 intron Shab + chr3L_11_2895001 chr3L_2895001 RAL-21 1015 chr3L 2927831 2927872 chr3L 2936120 2936165 Tirant 9 8295 3.0 4.0 3.5 2.0 8334 chr3L 2927831 intron Shab + chr3L 2931998 intron Shab + chr3L 2936165 intron Shab + chr3L_9_2930001 chr3L_2930001 RAL-21 1016 chr3L 3030956 3030965 chr3L 3031056 3031065 8 98 1.5 1.0 1.2 3.6 109 chr3L 3030956 intergenic not near genes chr3L 3031010 intergenic not near genes chr3L 3031065 intergenic not near genes chr3L_8_3030001 chr3L_3030001 RAL-21 1017 chr3L 3040317 3040355 chr3L 3042123 3042164 S-element 10 1808 1.5 7.0 4.2 1.9 1847 chr3L 3040317 3` UTR CG2162 + chr3L 3041240 intergenic not near genes chr3L 3042164 intergenic Jafrac2 + chr3L_10_3040001 chr3L_3040001 RAL-21 1018 chr3L 3051723 3051750 chr3L 3051985 3052012 pogo 11 262 5.0 2.0 3.5 2.4 289 chr3L 3051723 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052012 intergenic CG32485 + chr3L_11_3050001 chr3L_3050001 RAL-21 1019 chr3L 3281432 3281475 chr3L 3281948 3281965 Doc 7 505 1.0 4.0 2.5 2.0 533 chr3L 3281432 intron CG12017 + chr3L 3281698 intron CG12017 + chr3L 3281965 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-21 1020 chr3L 3300243 3300270 chr3L 3300332 3300357 5 84 3.5 2.0 2.8 1.3 114 chr3L 3300243 intron CG14968 - chr3L 3300300 intron CG14968 - chr3L 3300357 intron CG14968 - chr3L_5_3300001 chr3L_3300001 RAL-21 1021 chr3L 3317519 3317564 chr3L 3317618 3317663 16 98 0.5 3.5 2.0 5.3 144 chr3L 3317519 intergenic Drsl5 + chr3L 3317591 intergenic PIG-C -,Drsl5 + chr3L 3317663 intergenic PIG-C - chr3L_16_3315001 chr3L_3315001 RAL-21 1022 chr3L 3436269 3436312 chr3L 3436368 3436411 12 99 3.0 5.5 4.2 2.3 142 chr3L 3436269 intron eIF5B - chr3L 3436340 intron eIF5B - chr3L 3436411 intron eIF5B - chr3L_12_3435001 chr3L_3435001 RAL-21 1023 chr3L 3451358 3451381 chr3L 3451478 3451501 10 120 4.5 5.5 5.0 1.7 143 chr3L 3451358 intron eIF5B - chr3L 3451430 intron eIF5B - chr3L 3451501 intron eIF5B - chr3L_10_3450001 chr3L_3450001 RAL-21 1024 chr3L 3475094 3475103 chr3L 3475524 3475562 jockey 6 455 3.0 3.0 3.0 1.5 468 chr3L 3475094 intron CG42324 + chr3L 3475328 intron CG42324 + chr3L 3475562 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-21 1025 chr3L 3484368 3484407 chr3L 3484553 3484603 15 193 3.0 1.0 2.0 5.0 235 chr3L 3484368 intron,exon CG42324 +,CG43074 - chr3L 3484486 intron,exon CG42324 +,CG43074 - chr3L 3484603 intron,exon CG42324 +,CG43074 - chr3L_15_3480001 chr3L_3480001 RAL-21 1026 chr3L 3565943 3565970 chr3L 3566014 3566044 6 85 2.0 0.0 1.0 3.0 101 chr3L 3565943 intron Eip63E + chr3L 3565994 intron Eip63E + chr3L 3566044 intron Eip63E + chr3L_6_3565001 chr3L_3565001 RAL-21 1027 chr3L 3601284 3601329 chr3L 3606610 3606660 copia 8 5329 5.0 3.5 4.2 1.5 5376 chr3L 3601284 intron Eip63E + chr3L 3603972 intron Eip63E + chr3L 3606660 intron Eip63E + chr3L_8_3600001 chr3L_3600001 RAL-21 1028 chr3L 3619396 3619432 chr3L 3619494 3619546 13 111 1.5 2.0 1.8 4.6 150 chr3L 3619396 intergenic not near genes chr3L 3619471 intergenic not near genes chr3L 3619546 intergenic not near genes chr3L_13_3615001 chr3L_3615001 RAL-21 1029 chr3L 3627173 3627213 chr3L 3627276 3627316 4 103 2.5 2.0 2.2 1.2 143 chr3L 3627173 intron dar1 + chr3L 3627244 intron dar1 + chr3L 3627316 intron dar1 + chr3L_4_3625001 chr3L_3625001 RAL-21 1030 chr3L 3763738 3763760 chr3L 3763839 3763856 4 95 3.0 0.0 1.5 1.6 118 chr3L 3763738 intron CG32264 - chr3L 3763797 intron CG32264 - chr3L 3763856 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-21 1031 chr3L 3766726 3766758 chr3L 3766826 3766838 8 101 0.5 2.0 1.2 3.6 112 chr3L 3766726 intron CG32264 - chr3L 3766782 intron CG32264 - chr3L 3766838 intron CG32264 - chr3L_8_3765001 chr3L_3765001 RAL-21 1032 chr3L 3783252 3783266 chr3L 3783349 3783363 4 94 3.5 2.0 2.8 1.1 111 chr3L 3783252 intron CG32264 - chr3L 3783308 intron CG32264 - chr3L 3783363 intron CG32264 - chr3L_4_3780001 chr3L_3780001 RAL-21 1033 chr3L 3798027 3798054 chr3L 3798127 3798153 8 98 2.5 6.0 4.2 1.5 126 chr3L 3798027 intron CG32264 - chr3L 3798090 intron CG32264 - chr3L 3798153 intron CG32264 - chr3L_8_3795001 chr3L_3795001 RAL-21 1034 chr3L 3833721 3833739 chr3L 3833982 3834000 pogo 4 261 2.5 2.5 2.5 1.1 279 chr3L 3833721 intron enc + chr3L 3833860 intron enc + chr3L 3834000 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-21 1035 chr3L 3877443 3877465 chr3L 3877586 3877608 4 143 0.0 3.5 1.8 1.4 165 chr3L 3877443 intergenic not near genes chr3L 3877526 intergenic not near genes chr3L 3877608 intergenic not near genes chr3L_4_3875001 chr3L_3875001 RAL-21 1036 chr3L 3889112 3889147 chr3L 3889215 3889250 8 103 0.0 2.0 1.0 4.0 138 chr3L 3889112 intergenic not near genes chr3L 3889181 intergenic not near genes chr3L 3889250 intergenic not near genes chr3L_8_3885001 chr3L_3885001 RAL-21 1037 chr3L 3912781 3912810 chr3L 3912893 3912922 6 110 3.0 0.5 1.8 2.1 141 chr3L 3912781 intron Eip63F-1 - chr3L 3912852 intron Eip63F-1 - chr3L 3912922 intron Eip63F-1 - chr3L_6_3910001 chr3L_3910001 RAL-21 1038 chr3L 4146803 4146831 chr3L 4146900 4146933 9 101 0.0 5.5 2.8 2.4 130 chr3L 4146803 intergenic not near genes chr3L 4146868 intergenic not near genes chr3L 4146933 intergenic not near genes chr3L_9_4145001 chr3L_4145001 RAL-21 1039 chr3L 4170147 4170164 chr3L 4170243 4170262 6 98 1.0 2.5 1.8 2.1 115 chr3L 4170147 intergenic Ero1L + chr3L 4170204 intergenic Ero1L + chr3L 4170262 intergenic Ero1L + chr3L_6_4170001 chr3L_4170001 RAL-21 1040 chr3L 4213322 4213355 chr3L 4213425 4213459 6 102 1.5 1.0 1.2 2.7 137 chr3L 4213322 intron CG43367 + chr3L 4213390 intron CG43367 + chr3L 4213459 intron CG43367 + chr3L_6_4210001 chr3L_4210001 RAL-21 1041 chr3L 4214519 4214547 chr3L 4214681 4214682 11 158 5.0 5.0 5.0 1.8 163 chr3L 4214519 intron CG43367 + chr3L 4214600 intron CG43367 + chr3L 4214682 intron CG43367 + chr3L_11_4210001 chr3L_4210001 RAL-21 1042 chr3L 4356965 4357003 chr3L 4357056 4357103 9 93 1.5 4.5 3.0 2.2 138 chr3L 4356965 intron Cip4 - chr3L 4357034 intron Cip4 - chr3L 4357103 intron Cip4 - chr3L_9_4355001 chr3L_4355001 RAL-21 1043 chr3L 4360973 4361013 chr3L 4362841 4362880 6 1868 6.0 3.5 4.8 1.0 1907 chr3L 4360973 intron Cip4 - chr3L 4361926 intron Cip4 - chr3L 4362880 intron Cip4 - chr3L_6_4360001 chr3L_4360001 RAL-21 1044 chr3L 4441823 4441854 chr3L 4441915 4441937 9 95 4.0 4.0 4.0 1.8 114 chr3L 4441823 intergenic not near genes chr3L 4441880 intergenic not near genes chr3L 4441937 intergenic not near genes chr3L_9_4440001 chr3L_4440001 RAL-21 1045 chr3L 4487909 4487948 chr3L 4488203 4488228 11 288 5.0 13.0 9.0 1.1 319 chr3L 4487909 intron CG13722 - chr3L 4488068 intron CG13722 - chr3L 4488228 intron CG13722 - chr3L_11_4485001 chr3L_4485001 RAL-21 1046 chr3L 4488389 4488419 chr3L 4488485 4488515 8 95 15.0 6.0 10.5 0.7 126 chr3L 4488389 intron CG13722 - chr3L 4488452 intron CG13722 - chr3L 4488515 intron CG13722 - chr3L_8_4485001 chr3L_4485001 RAL-21 1047 chr3L 4487898 4487914 chr3L 4488420 4488431 5 520 5.0 20.0 12.5 0.4 533 chr3L 4487898 intron CG13722 - chr3L 4488164 intron CG13722 - chr3L 4488431 intron CG13722 - chr3L_5_4485001 chr3L_4485001 RAL-21 1048 chr3L 4487922 4487935 chr3L 4488439 4488452 5 518 5.5 15.0 10.2 0.4 530 chr3L 4487922 intron CG13722 - chr3L 4488187 intron CG13722 - chr3L 4488452 intron CG13722 - chr3L_5_4485001 chr3L_4485001 RAL-21 1049 chr3L 4487912 4487946 chr3L 4488453 4488463 4 523 5.0 11.0 8.0 0.4 551 chr3L 4487912 intron CG13722 - chr3L 4488188 intron CG13722 - chr3L 4488463 intron CG13722 - chr3L_4_4485001 chr3L_4485001 RAL-21 1050 chr3L 4519407 4519446 chr3L 4519504 4519539 10 96 8.0 3.0 5.5 1.5 132 chr3L 4519407 intron Tie - chr3L 4519473 intron Tie - chr3L 4519539 intron Tie - chr3L_10_4515001 chr3L_4515001 RAL-21 1051 chr3L 4597198 4597232 chr3L 4597300 4597333 5 101 1.5 3.5 2.5 1.4 135 chr3L 4597198 intron Src64B - chr3L 4597266 intron Src64B - chr3L 4597333 intron Src64B - chr3L_5_4595001 chr3L_4595001 RAL-21 1052 chr3L 4604849 4604899 chr3L 4604980 4605027 6 124 4.0 4.0 4.0 1.2 178 chr3L 4604849 intron Src64B - chr3L 4604938 intron Src64B - chr3L 4605027 intron Src64B - chr3L_6_4600001 chr3L_4600001 RAL-21 1053 chr3L 4654501 4654533 chr3L 4654597 4654625 9 95 2.5 8.0 5.2 1.5 124 chr3L 4654501 intron axo - chr3L 4654563 intron axo - chr3L 4654625 intron axo - chr3L_9_4650001 chr3L_4650001 RAL-21 1054 chr3L 4676017 4676035 chr3L 4676118 4676136 5 101 5.0 1.5 3.2 1.2 119 chr3L 4676017 intron axo - chr3L 4676076 intron axo - chr3L 4676136 intron axo - chr3L_5_4675001 chr3L_4675001 RAL-21 1055 chr3L 4685552 4685577 chr3L 4685946 4685971 7 394 5.0 2.5 3.8 1.5 419 chr3L 4685552 intron axo - chr3L 4685762 intron axo - chr3L 4685971 intron axo - chr3L_7_4685001 chr3L_4685001 RAL-21 1056 chr3L 4714580 4714612 chr3L 4714678 4714710 7 97 4.5 5.0 4.8 1.2 130 chr3L 4714580 intron RhoGEF64C + chr3L 4714645 intron RhoGEF64C + chr3L 4714710 intron RhoGEF64C + chr3L_7_4710001 chr3L_4710001 RAL-21 1057 chr3L 4725309 4725349 chr3L 4725417 4725457 9 104 3.0 1.5 2.2 2.8 148 chr3L 4725309 intron RhoGEF64C + chr3L 4725383 intron RhoGEF64C + chr3L 4725457 intron RhoGEF64C + chr3L_9_4725001 chr3L_4725001 RAL-21 1058 chr3L 4782088 4782112 chr3L 4782208 4782232 9 120 4.0 2.5 3.2 2.1 144 chr3L 4782088 intron RhoGEF64C + chr3L 4782160 intron RhoGEF64C + chr3L 4782232 intron RhoGEF64C + chr3L_9_4780001 chr3L_4780001 RAL-21 1059 chr3L 4837876 4837901 chr3L 4837975 4838000 8 98 6.5 5.5 6.0 1.1 124 chr3L 4837876 3` UTR CG13707 - chr3L 4837938 3` UTR CG13707 - chr3L 4838000 3` UTR CG13707 - chr3L_8_4835001 chr3L_4835001 RAL-21 1060 chr3L 4837909 4837920 chr3L 4837972 4838019 5 87 3.0 4.0 3.5 1.1 110 chr3L 4837909 3` UTR CG13707 - chr3L 4837964 3` UTR CG13707 - chr3L 4838019 3` UTR CG13707 - chr3L_5_4835001 chr3L_4835001 RAL-21 1061 chr3L 4839536 4839577 chr3L 4839625 4839674 11 96 4.0 3.0 3.5 2.4 138 chr3L 4839536 intron CG13707 - chr3L 4839605 intron CG13707 - chr3L 4839674 intron CG13707 - chr3L_11_4835001 chr3L_4835001 RAL-21 1062 chr3L 4901112 4901161 chr3L 4907322 4907364 diver 10 6208 1.0 3.5 2.2 3.1 6252 chr3L 4901112 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907364 intergenic not near genes chr3L_10_4900001 chr3L_4900001 RAL-21 1063 chr3L 4989172 4989178 chr3L 4989282 4989288 4 110 0.0 0.0 0.0 4.0 116 chr3L 4989172 intron Con - chr3L 4989230 intron Con - chr3L 4989288 intron Con - chr3L_4_4985001 chr3L_4985001 RAL-21 1064 chr3L 5034146 5034183 chr3L 5043317 5043355 roo 6 9171 4.0 4.0 4.0 1.2 9209 chr3L 5034146 intron Con - chr3L 5038750 intron Con - chr3L 5043355 intron Con - chr3L_6_5035001 chr3L_5035001 RAL-21 1065 chr3L 5045440 5045462 chr3L 5050241 5050263 Doc 5 4801 8.0 2.0 5.0 0.8 4823 chr3L 5045440 intron Con - chr3L 5047852 intron Con - chr3L 5050263 intron Con - chr3L_5_5045001 chr3L_5045001 RAL-21 1066 chr3L 5066282 5066309 chr3L 5066401 5066427 6 119 5.5 0.5 3.0 1.5 145 chr3L 5066282 intron Con - chr3L 5066354 intron Con - chr3L 5066427 intron Con - chr3L_6_5065001 chr3L_5065001 RAL-21 1067 chr3L 5104463 5104511 chr3L 5124617 5124665 10 20154 3.0 5.0 4.0 2.0 20202 chr3L 5104463 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124665 intergenic not near genes chr3L_10_5110001 chr3L_5110001 RAL-21 1068 chr3L 5164617 5164668 chr3L 5164712 5164764 15 94 2.5 3.5 3.0 3.8 147 chr3L 5164617 intron shep - chr3L 5164690 intron shep - chr3L 5164764 intron shep - chr3L_15_5160001 chr3L_5160001 RAL-21 1069 chr3L 5186557 5186588 chr3L 5186894 5186925 9 340 1.0 2.5 1.8 3.2 368 chr3L 5186557 intron shep - chr3L 5186741 intron shep - chr3L 5186925 intron shep - chr3L_9_5185001 chr3L_5185001 RAL-21 1070 chr3L 5251846 5251871 chr3L 5251944 5251970 6 99 0.0 5.0 2.5 1.7 124 chr3L 5251846 intron shep - chr3L 5251908 intron shep - chr3L 5251970 intron shep - chr3L_6_5250001 chr3L_5250001 RAL-21 1071 chr3L 5261146 5261163 chr3L 5261245 5261262 4 99 5.5 5.0 5.2 0.6 116 chr3L 5261146 intron shep - chr3L 5261204 intron shep - chr3L 5261262 intron shep - chr3L_4_5260001 chr3L_5260001 RAL-21 1072 chr3L 5299143 5299182 chr3L 5306599 5306638 Quasimodo 6 7455 5.0 5.0 5.0 1.0 7495 chr3L 5299143 intergenic not near genes chr3L 5302890 intergenic not near genes chr3L 5306638 intergenic not near genes chr3L_6_5300001 chr3L_5300001 RAL-21 1073 chr3L 5313386 5313419 chr3L 5313486 5313519 6 100 4.5 5.5 5.0 1.0 133 chr3L 5313386 intergenic not near genes chr3L 5313452 intergenic not near genes chr3L 5313519 intergenic not near genes chr3L_6_5310001 chr3L_5310001 RAL-21 1074 chr3L 5387875 5387913 chr3L 5388059 5388097 11 180 1.0 4.0 2.5 3.1 222 chr3L 5387875 intergenic not near genes chr3L 5387986 intergenic not near genes chr3L 5388097 intergenic not near genes chr3L_11_5385001 chr3L_5385001 RAL-21 1075 chr3L 5482941 5483080 chr3L 5483151 5483194 7 148 0.0 0.5 0.2 5.8 253 chr3L 5482941 exon CG4835 + chr3L 5483068 exon CG4835 + chr3L 5483194 exon CG4835 + chr3L_7_5480001 chr3L_5480001 RAL-21 1076 chr3L 5490365 5490403 chr3L 5490531 5490569 8 166 1.0 0.0 0.5 5.3 204 chr3L 5490365 intergenic not near genes chr3L 5490467 intergenic not near genes chr3L 5490569 intergenic not near genes chr3L_8_5490001 chr3L_5490001 RAL-21 1077 chr3L 5504540 5504567 chr3L 5504638 5504665 8 98 7.5 2.0 4.8 1.4 125 chr3L 5504540 intron CG34342 - chr3L 5504602 intron CG34342 - chr3L 5504665 intron CG34342 - chr3L_8_5500001 chr3L_5500001 RAL-21 1078 chr3L 5537716 5537727 chr3L 5538076 5538089 jockey 5 361 6.0 8.0 7.0 0.6 373 chr3L 5537716 intergenic not near genes chr3L 5537902 intergenic not near genes chr3L 5538089 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-21 1079 chr3L 5537732 5537758 chr3L 5538064 5538088 jockey 5 343 2.0 6.5 4.2 1.0 356 chr3L 5537732 intergenic not near genes chr3L 5537910 intergenic CG10625 - chr3L 5538088 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-21 1080 chr3L 5690452 5690491 chr3L 5690549 5690587 10 95 1.5 2.0 1.8 3.6 135 chr3L 5690452 intron sif + chr3L 5690520 intron sif + chr3L 5690587 intron sif + chr3L_10_5690001 chr3L_5690001 RAL-21 1081 chr3L 5765171 5765211 chr3L 5765260 5765306 6 86 3.0 3.5 3.2 1.4 135 chr3L 5765171 exon CG10576 - chr3L 5765238 intron CG10576 - chr3L 5765306 intron CG10576 - chr3L_6_5765001 chr3L_5765001 RAL-21 1082 chr3L 5910013 5910062 chr3L 5910274 5910323 pogo 15 260 3.0 8.5 5.8 2.2 310 chr3L 5910013 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_15_5910001 chr3L_5910001 RAL-21 1083 chr3L 5983836 5983866 chr3L 5983958 5984007 8 138 3.5 0.5 2.0 2.7 171 chr3L 5983836 3` UTR CR45439 - chr3L 5983922 intergenic CR45439 -,CR45440 - chr3L 5984007 intergenic CR45440 -,CR45439 - chr3L_8_5980001 chr3L_5980001 RAL-21 1084 chr3L 6001669 6001714 chr3L 6004389 6004434 jockey 13 2718 4.5 0.5 2.5 3.7 2765 chr3L 6001669 intron PVRAP + chr3L 6003052 intron PVRAP + chr3L 6004434 intron PVRAP + chr3L_13_6000001 chr3L_6000001 RAL-21 1085 chr3L 6040346 6040393 chr3L 6042722 6042769 Doc 11 2373 6.0 3.5 4.8 1.9 2423 chr3L 6040346 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_11_6040001 chr3L_6040001 RAL-21 1086 chr3L 6077771 6077806 chr3L 6077861 6077906 4 98 1.0 0.0 0.5 2.7 135 chr3L 6077771 intron ssp6 + chr3L 6077838 intron ssp6 + chr3L 6077906 intron ssp6 + chr3L_4_6075001 chr3L_6075001 RAL-21 1087 chr3L 6102934 6102959 chr3L 6103037 6103062 6 102 6.5 0.5 3.5 1.3 128 chr3L 6102934 intron Ets65A + chr3L 6102998 intron Ets65A + chr3L 6103062 intron Ets65A + chr3L_6_6100001 chr3L_6100001 RAL-21 1088 chr3L 6116689 6116723 chr3L 6116793 6116827 12 103 4.5 3.0 3.8 2.5 138 chr3L 6116689 intron Ets65A + chr3L 6116758 intron Ets65A + chr3L 6116827 intron Ets65A + chr3L_12_6115001 chr3L_6115001 RAL-21 1089 chr3L 6119130 6119152 chr3L 6119227 6119249 10 97 1.0 0.0 0.5 6.7 119 chr3L 6119130 exon Ets65A + chr3L 6119190 intron Ets65A + chr3L 6119249 intron Ets65A + chr3L_10_6115001 chr3L_6115001 RAL-21 1090 chr3L 6155701 6155712 chr3L 6155807 6155818 5 106 4.5 0.5 2.5 1.4 117 chr3L 6155701 intergenic CR45421 - chr3L 6155760 intergenic not near genes chr3L 6155818 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-21 1091 chr3L 6159859 6159897 chr3L 6159964 6160002 10 108 4.0 3.0 3.5 2.2 143 chr3L 6159859 intergenic not near genes chr3L 6159930 intergenic not near genes chr3L 6160002 intergenic not near genes chr3L_10_6155001 chr3L_6155001 RAL-21 1092 chr3L 6169126 6169135 chr3L 6169213 6169234 4 92 8.5 8.5 8.5 0.4 108 chr3L 6169126 3` UTR CG10289 - chr3L 6169180 3` UTR CG10289 - chr3L 6169234 3` UTR CG10289 - chr3L_4_6165001 chr3L_6165001 RAL-21 1093 chr3L 6220907 6220911 chr3L 6230069 6230083 roo 5 9169 8.5 2.5 5.5 0.8 9176 chr3L 6220907 5` UTR pncr008:3L + chr3L 6225495 intergenic not near genes chr3L 6230083 intergenic not near genes chr3L_5_6225001 chr3L_6225001 RAL-21 1094 chr3L 6220925 6220941 chr3L 6230066 6230082 roo 4 9156 4.0 2.5 3.2 1.0 9157 chr3L 6220925 5` UTR pncr008:3L + chr3L 6225504 intergenic not near genes chr3L 6230082 intergenic not near genes chr3L_4_6225001 chr3L_6225001 RAL-21 1095 chr3L 6267298 6267349 chr3L 6267406 6267457 17 108 1.5 3.5 2.5 4.9 159 chr3L 6267298 intergenic not near genes chr3L 6267378 intergenic not near genes chr3L 6267457 intergenic not near genes chr3L_17_6265001 chr3L_6265001 RAL-21 1096 chr3L 6278191 6278239 chr3L 6278287 6278335 5 95 3.5 0.5 2.0 1.7 144 chr3L 6278191 intergenic not near genes chr3L 6278263 intergenic not near genes chr3L 6278335 intergenic not near genes chr3L_5_6275001 chr3L_6275001 RAL-21 1097 chr3L 6334988 6335038 chr3L 6335479 6335529 297 9 487 1.5 5.5 3.5 2.0 541 chr3L 6334988 intron CG13300 - chr3L 6335258 intron CG13300 - chr3L 6335529 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-21 1098 chr3L 6362369 6362409 chr3L 6362466 6362506 17 96 3.5 2.5 3.0 4.2 137 chr3L 6362369 intergenic not near genes chr3L 6362438 intergenic not near genes chr3L 6362506 intergenic not near genes chr3L_17_6360001 chr3L_6360001 RAL-21 1099 chr3L 6405639 6405675 chr3L 6432123 6432159 roo 12 26483 4.5 7.0 5.8 1.8 26520 chr3L 6405639 intron CG42747 + chr3L 6418899 intron CG42747 + chr3L 6432159 intron CG42747 + chr3L_12_6415001 chr3L_6415001 RAL-21 1100 chr3L 6466002 6466045 chr3L 6466107 6466150 8 105 4.5 1.5 3.0 2.0 148 chr3L 6466002 intron CG42747 + chr3L 6466076 intron CG42747 + chr3L 6466150 intron CG42747 + chr3L_8_6465001 chr3L_6465001 RAL-21 1101 chr3L 6562835 6562861 chr3L 6562921 6562961 7 98 5.0 4.5 4.8 1.2 126 chr3L 6562835 intron CG18769 + chr3L 6562898 intron CG18769 + chr3L 6562961 intron CG18769 + chr3L_7_6560001 chr3L_6560001 RAL-21 1102 chr3L 6575525 6575568 chr3L 6575704 6575747 14 178 2.5 4.0 3.2 3.3 222 chr3L 6575525 intron,intron CG18769 +,jv - chr3L 6575636 intron,intron CG18769 +,jv - chr3L 6575747 intron,intron CG18769 +,jv - chr3L_14_6575001 chr3L_6575001 RAL-21 1103 chr3L 6641688 6641707 chr3L 6642046 6642065 9 357 3.5 0.0 1.8 3.2 377 chr3L 6641688 intergenic CR45238 + chr3L 6641876 intergenic CR45238 +,CR45239 + chr3L 6642065 intergenic CR45239 + chr3L_9_6640001 chr3L_6640001 RAL-21 1104 chr3L 6781104 6781150 chr3L 6783137 6783180 Doc 9 2030 3.0 0.0 1.5 3.6 2076 chr3L 6781104 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783180 intergenic not near genes chr3L_9_6780001 chr3L_6780001 RAL-21 1105 chr3L 6788210 6788256 chr3L 6788988 6789018 10 776 15.0 5.0 10.0 0.9 808 chr3L 6788210 intergenic not near genes chr3L 6788614 intergenic not near genes chr3L 6789018 intergenic not near genes chr3L_10_6785001 chr3L_6785001 RAL-21 1106 chr3L 6787979 6788000 chr3L 6788925 6788946 4 946 17.0 14.5 15.8 0.2 967 chr3L 6787979 intergenic not near genes chr3L 6788462 intergenic not near genes chr3L 6788946 intergenic not near genes chr3L_4_6785001 chr3L_6785001 RAL-21 1107 chr3L 6868706 6868740 chr3L 6868804 6868838 7 98 0.0 1.0 0.5 4.7 132 chr3L 6868706 intergenic not near genes chr3L 6868772 intergenic not near genes chr3L 6868838 intergenic not near genes chr3L_7_6865001 chr3L_6865001 RAL-21 1108 chr3L 6887503 6887542 chr3L 6895015 6895049 roo 14 7512 4.5 4.0 4.2 2.7 7546 chr3L 6887503 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895049 intergenic not near genes chr3L_14_6890001 chr3L_6890001 RAL-21 1109 chr3L 6900893 6900907 chr3L 6900989 6901003 5 96 0.0 3.0 1.5 2.0 110 chr3L 6900893 intergenic not near genes chr3L 6900948 intergenic not near genes chr3L 6901003 intergenic not near genes chr3L_5_6900001 chr3L_6900001 RAL-21 1110 chr3L 6907993 6908047 chr3L 6908098 6908144 4 97 3.0 0.0 1.5 1.6 151 chr3L 6907993 intergenic not near genes chr3L 6908068 intergenic not near genes chr3L 6908144 intergenic not near genes chr3L_4_6905001 chr3L_6905001 RAL-21 1111 chr3L 6994894 6994912 chr3L 6995524 6995542 BS 9 630 0.0 2.0 1.0 4.5 648 chr3L 6994894 intergenic bin + chr3L 6995218 intergenic not near genes chr3L 6995542 intergenic not near genes chr3L_9_6995001 chr3L_6995001 RAL-21 1112 chr3L 7025510 7025561 chr3L 7025932 7025977 7 414 3.0 4.5 3.8 1.5 467 chr3L 7025510 intron Mp + chr3L 7025744 intron Mp + chr3L 7025977 intron,exon Mp +,CG17744 - chr3L_7_7025001 chr3L_7025001 RAL-21 1113 chr3L 7090873 7090921 chr3L 7090976 7091025 16 103 2.0 1.5 1.8 5.7 152 chr3L 7090873 intergenic not near genes chr3L 7090949 intergenic not near genes chr3L 7091025 intergenic not near genes chr3L_16_7090001 chr3L_7090001 RAL-21 1114 chr3L 7104028 7104070 chr3L 7104152 7104189 9 122 3.0 4.5 3.8 1.9 161 chr3L 7104028 intron form3 + chr3L 7104108 intron form3 + chr3L 7104189 intron form3 + chr3L_9_7100001 chr3L_7100001 RAL-21 1115 chr3L 7112570 7112611 chr3L 7112676 7112718 5 105 5.5 4.0 4.8 0.9 148 chr3L 7112570 intron form3 + chr3L 7112644 intron form3 + chr3L 7112718 intron form3 + chr3L_5_7110001 chr3L_7110001 RAL-21 1116 chr3L 7129933 7129980 chr3L 7130145 7130192 BS 12 212 3.5 4.5 4.0 2.4 259 chr3L 7129933 intergenic CG15829 + chr3L 7130062 intergenic CG15829 + chr3L 7130192 intergenic not near genes chr3L_12_7130001 chr3L_7130001 RAL-21 1117 chr3L 7175016 7175060 chr3L 7175266 7175310 16 246 3.5 3.0 3.2 3.8 294 chr3L 7175016 intron Dscam2 - chr3L 7175163 intron Dscam2 - chr3L 7175310 intron Dscam2 - chr3L_16_7175001 chr3L_7175001 RAL-21 1118 chr3L 7218072 7218114 chr3L 7218165 7218188 9 88 0.5 1.5 1.0 4.5 116 chr3L 7218072 intergenic not near genes chr3L 7218130 intergenic not near genes chr3L 7218188 intergenic not near genes chr3L_9_7215001 chr3L_7215001 RAL-21 1119 chr3L 7285435 7285473 chr3L 7285532 7285571 12 98 2.5 0.5 1.5 4.8 136 chr3L 7285435 intron unc-13-4A - chr3L 7285503 intron unc-13-4A - chr3L 7285571 intron unc-13-4A - chr3L_12_7285001 chr3L_7285001 RAL-21 1120 chr3L 7377297 7377342 chr3L 7380422 7380467 297 10 3125 2.5 3.0 2.8 2.6 3170 chr3L 7377297 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380467 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-21 1121 chr3L 7450677 7450691 chr3L 7450777 7450794 5 102 4.0 1.5 2.8 1.3 117 chr3L 7450677 intron CG42458 + chr3L 7450736 intron CG42458 + chr3L 7450794 intron CG42458 + chr3L_5_7450001 chr3L_7450001 RAL-21 1122 chr3L 7480034 7480063 chr3L 7480143 7480172 9 108 1.0 2.0 1.5 3.6 138 chr3L 7480034 intergenic not near genes chr3L 7480103 intergenic not near genes chr3L 7480172 intergenic not near genes chr3L_9_7480001 chr3L_7480001 RAL-21 1123 chr3L 7498743 7498772 chr3L 7503540 7503569 F-element 9 4797 7.0 9.0 8.0 1.0 4826 chr3L 7498743 5` UTR CG8539 - chr3L 7501156 intergenic not near genes chr3L 7503569 intergenic not near genes chr3L_9_7500001 chr3L_7500001 RAL-21 1124 chr3L 7508660 7508700 chr3L 7508764 7508784 7 101 4.5 2.5 3.5 1.6 124 chr3L 7508660 intergenic not near genes chr3L 7508722 intergenic not near genes chr3L 7508784 intergenic not near genes chr3L_7_7505001 chr3L_7505001 RAL-21 1125 chr3L 7549061 7549102 chr3L 7549181 7549221 7 119 1.0 1.5 1.2 3.2 160 chr3L 7549061 intergenic not near genes chr3L 7549141 intergenic not near genes chr3L 7549221 intergenic not near genes chr3L_7_7545001 chr3L_7545001 RAL-21 1126 chr3L 7574690 7574847 chr3L 7574795 7574944 9 102 0.0 0.0 0.0 9.0 254 chr3L 7574690 intergenic not near genes chr3L 7574817 intergenic not near genes chr3L 7574944 intergenic not near genes chr3L_9_7570001 chr3L_7570001 RAL-21 1127 chr3L 7591155 7591182 chr3L 7591236 7591277 8 81 2.0 4.0 3.0 2.0 122 chr3L 7591155 intergenic CG7716 - chr3L 7591216 intergenic CG7716 - chr3L 7591277 intergenic CG7716 - chr3L_8_7590001 chr3L_7590001 RAL-21 1128 chr3L 7695426 7695466 chr3L 7695531 7695571 10 105 4.0 3.5 3.8 2.1 145 chr3L 7695426 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 7695498 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L 7695571 intron,intron,5` UTR CG32373 +,Ank2 -,CG44195 - chr3L_10_7695001 chr3L_7695001 RAL-21 1129 chr3L 7719690 7719726 chr3L 7719860 7719904 7 177 0.0 1.5 0.8 3.9 214 chr3L 7719690 intron,intron CG32373 +,CG12262 + chr3L 7719797 intron,intron CG32373 +,CG12262 + chr3L 7719904 intron,intron CG32373 +,CG12262 + chr3L_7_7715001 chr3L_7715001 RAL-21 1130 chr3L 7751013 7751045 chr3L 7751111 7751123 4 93 3.0 0.5 1.8 1.4 110 chr3L 7751013 intron CG32373 + chr3L 7751068 intron CG32373 + chr3L 7751123 intron CG32373 + chr3L_4_7750001 chr3L_7750001 RAL-21 1131 chr3L 7769272 7769322 chr3L 7769386 7769418 11 109 2.5 6.5 4.5 2.0 146 chr3L 7769272 intron Clk - chr3L 7769345 intron Clk - chr3L 7769418 intron Clk - chr3L_11_7765001 chr3L_7765001 RAL-21 1132 chr3L 7793696 7793732 chr3L 7800768 7800804 297 8 7072 5.5 4.0 4.8 1.4 7108 chr3L 7793696 intron CG32369 - chr3L 7797250 intron CG32369 - chr3L 7800804 intron CG32369 - chr3L_8_7795001 chr3L_7795001 RAL-21 1133 chr3L 7845365 7845413 chr3L 7845468 7845506 10 97 3.0 2.5 2.8 2.6 141 chr3L 7845365 intron Pdp1 - chr3L 7845436 intron Pdp1 - chr3L 7845506 intron Pdp1 - chr3L_10_7845001 chr3L_7845001 RAL-21 1134 chr3L 7886499 7886547 chr3L 7889036 7889083 Stalker4 10 2533 3.5 2.0 2.8 2.6 2584 chr3L 7886499 intron CG32365 + chr3L 7887791 intron CG32365 + chr3L 7889083 intron CG32365 + chr3L_10_7885001 chr3L_7885001 RAL-21 1135 chr3L 7916810 7916852 chr3L 7926001 7926043 roo 13 9190 3.0 3.5 3.2 3.1 9233 chr3L 7916810 3` UTR syd - chr3L 7921426 intron syd - chr3L 7926043 3` UTR syd - chr3L_13_7920001 chr3L_7920001 RAL-21 1136 chr3L 7939443 7939466 chr3L 7939544 7939568 6 102 5.5 5.5 5.5 0.9 125 chr3L 7939443 intergenic not near genes chr3L 7939506 intergenic not near genes chr3L 7939568 intergenic not near genes chr3L_6_7935001 chr3L_7935001 RAL-21 1137 chr3L 7985358 7985365 chr3L 7987706 7987713 NOF 6 2347 10.0 10.5 10.2 0.5 2355 chr3L 7985358 intron nmo + chr3L 7986536 intron nmo + chr3L 7987713 intron nmo + chr3L_6_7985001 chr3L_7985001 RAL-21 1138 chr3L 7985367 7985396 chr3L 7987696 7987719 NOF 10 2336 5.0 7.0 6.0 1.4 2352 chr3L 7985367 intron nmo + chr3L 7986543 intron nmo + chr3L 7987719 intron nmo + chr3L_10_7985001 chr3L_7985001 RAL-21 1139 chr3L 8002940 8002956 chr3L 8003332 8003348 5 392 5.5 6.5 6.0 0.7 408 chr3L 8002940 intron nmo + chr3L 8003144 intron nmo + chr3L 8003348 intron nmo + chr3L_5_8000001 chr3L_8000001 RAL-21 1140 chr3L 8019688 8019706 chr3L 8024120 8024123 NOF 5 4425 5.0 3.0 4.0 1.0 4435 chr3L 8019688 intron nmo + chr3L 8021906 intron nmo + chr3L 8024123 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-21 1141 chr3L 8019711 8019734 chr3L 8024115 8024126 NOF 9 4422 3.0 2.5 2.8 2.4 4415 chr3L 8019711 intron nmo + chr3L 8021918 intron nmo + chr3L 8024126 intron nmo + chr3L_9_8020001 chr3L_8020001 RAL-21 1142 chr3L 8026584 8026627 chr3L 8026676 8026727 14 97 2.5 3.0 2.8 3.7 143 chr3L 8026584 intron nmo + chr3L 8026656 intron nmo + chr3L 8026727 intron nmo + chr3L_14_8025001 chr3L_8025001 RAL-21 1143 chr3L 8078757 8078800 chr3L 8078987 8079030 16 227 5.0 2.5 3.8 3.3 273 chr3L 8078757 intron Ect4 + chr3L 8078894 intron Ect4 + chr3L 8079030 intron Ect4 + chr3L_16_8075001 chr3L_8075001 RAL-21 1144 chr3L 8149750 8149771 chr3L 8149876 8149896 9 126 4.5 2.5 3.5 2.0 146 chr3L 8149750 intron CG13676 - chr3L 8149823 intron CG13676 - chr3L 8149896 intron CG13676 - chr3L_9_8145001 chr3L_8145001 RAL-21 1145 chr3L 8225798 8225819 chr3L 8225897 8225908 4 96 5.0 1.0 3.0 1.0 110 chr3L 8225798 intergenic not near genes chr3L 8225853 intergenic not near genes chr3L 8225908 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-21 1146 chr3L 8270733 8270753 chr3L 8270855 8270875 4 121 3.0 3.0 3.0 1.0 142 chr3L 8270733 intron Dscam4 + chr3L 8270804 intron Dscam4 + chr3L 8270875 intron Dscam4 + chr3L_4_8270001 chr3L_8270001 RAL-21 1147 chr3L 8295770 8295824 chr3L 8295948 8296002 11 178 3.5 1.0 2.2 3.4 232 chr3L 8295770 intergenic CG7201 - chr3L 8295886 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_11_8295001 chr3L_8295001 RAL-21 1148 chr3L 8394023 8394059 chr3L 8394119 8394155 7 96 3.0 5.0 4.0 1.4 132 chr3L 8394023 intergenic Jon66Cii - chr3L 8394089 intergenic Jon66Cii - chr3L 8394155 intergenic not near genes chr3L_7_8390001 chr3L_8390001 RAL-21 1149 chr3L 8395272 8395277 chr3L 8395389 8395394 INE-1 4 117 0.0 12.0 6.0 0.6 122 chr3L 8395272 intergenic not near genes chr3L 8395333 intergenic not near genes chr3L 8395394 intergenic not near genes chr3L_4_8395001 chr3L_8395001 RAL-21 1150 chr3L 8443551 8443583 chr3L 8443652 8443685 6 102 7.0 4.0 5.5 0.9 134 chr3L 8443551 3` UTR CG6983 - chr3L 8443618 3` UTR CG6983 - chr3L 8443685 3` UTR CG6983 - chr3L_6_8440001 chr3L_8440001 RAL-21 1151 chr3L 8498284 8498324 chr3L 8505770 8505811 blood 9 7485 5.5 6.0 5.8 1.3 7527 chr3L 8498284 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505811 intron CG43163 - chr3L_9_8500001 chr3L_8500001 RAL-21 1152 chr3L 8537756 8537806 chr3L 8537881 8537931 11 125 2.0 3.0 2.5 3.1 175 chr3L 8537756 3` UTR ergic53 + chr3L 8537844 3` UTR ergic53 + chr3L 8537931 3` UTR ergic53 + chr3L_11_8535001 chr3L_8535001 RAL-21 1153 chr3L 8585307 8585321 chr3L 8585403 8585417 4 96 3.5 7.0 5.2 0.6 110 chr3L 8585307 intron CG43078 + chr3L 8585362 intron CG43078 + chr3L 8585417 intron CG43078 + chr3L_4_8585001 chr3L_8585001 RAL-21 1154 chr3L 8585323 8585332 chr3L 8585401 8585413 7 91 1.0 6.5 3.8 1.5 90 chr3L 8585323 intron CG43078 + chr3L 8585368 intron CG43078 + chr3L 8585413 intron CG43078 + chr3L_7_8585001 chr3L_8585001 RAL-21 1155 chr3L 7997134 7997138 chr3L 8712521 8712528 5 715388 15.0 6.0 10.5 0.4 715394 chr3L 7997134 intron nmo + chr3L 8354831 intron CG17352 - chr3L 8712528 intergenic not near genes chr3L_5_8350001 chr3L_8350001 RAL-21 1156 chr3L 8851943 8851946 chr3L 8852024 8852044 4 86 1.0 6.5 3.8 0.8 101 chr3L 8851943 intron dally + chr3L 8851994 intron dally + chr3L 8852044 intron dally + chr3L_4_8850001 chr3L_8850001 RAL-21 1157 chr3L 8861516 8861550 chr3L 8861627 8861661 6 110 4.0 2.5 3.2 1.4 145 chr3L 8861516 intron dally + chr3L 8861588 intron dally + chr3L 8861661 intron dally + chr3L_6_8860001 chr3L_8860001 RAL-21 1158 chr3L 8928256 8928291 chr3L 8928352 8928387 7 95 4.0 6.0 5.0 1.2 131 chr3L 8928256 intron Tsp66E + chr3L 8928322 intron Tsp66E + chr3L 8928387 intron Tsp66E + chr3L_7_8925001 chr3L_8925001 RAL-21 1159 chr3L 8959379 8959400 chr3L 8959560 8959581 9 181 3.0 3.0 3.0 2.2 202 chr3L 8959379 intron CG13313 + chr3L 8959480 intron CG13313 + chr3L 8959581 intron CG13313 + chr3L_9_8955001 chr3L_8955001 RAL-21 1160 chr3L 9003936 9003975 chr3L 9004040 9004079 10 100 2.5 7.5 5.0 1.7 143 chr3L 9003936 intergenic not near genes chr3L 9004008 intergenic not near genes chr3L 9004079 intergenic not near genes chr3L_10_9000001 chr3L_9000001 RAL-21 1161 chr3L 9009949 9009970 chr3L 9010063 9010094 6 122 3.0 6.0 4.5 1.1 145 chr3L 9009949 intergenic CG5194 - chr3L 9010022 intergenic CG5194 - chr3L 9010094 intergenic CG5194 - chr3L_6_9010001 chr3L_9010001 RAL-21 1162 chr3L 9076923 9076951 chr3L 9084503 9084531 412 7 7576 4.5 6.0 5.2 1.1 7608 chr3L 9076923 exon Tequila + chr3L 9080727 intron Tequila + chr3L 9084531 exon Tequila + chr3L_7_9080001 chr3L_9080001 RAL-21 1163 chr3L 9111128 9111163 chr3L 9111224 9111259 4 96 5.0 1.0 3.0 1.0 131 chr3L 9111128 intron bol - chr3L 9111194 intron bol - chr3L 9111259 intron bol - chr3L_4_9110001 chr3L_9110001 RAL-21 1164 chr3L 9115236 9115271 chr3L 9115339 9115374 8 102 2.0 2.5 2.2 2.5 138 chr3L 9115236 intron bol - chr3L 9115305 intron bol - chr3L 9115374 intron bol - chr3L_8_9115001 chr3L_9115001 RAL-21 1165 chr3L 9125780 9125795 chr3L 9125877 9125892 7 97 0.0 2.5 1.2 3.2 112 chr3L 9125780 intron bol - chr3L 9125836 intron bol - chr3L 9125892 intron bol - chr3L_7_9125001 chr3L_9125001 RAL-21 1166 chr3L 9129178 9129303 chr3L 9129278 9129430 10 103 4.5 2.0 3.2 2.4 252 chr3L 9129178 intron bol - chr3L 9129304 intron bol - chr3L 9129430 intron bol - chr3L_10_9125001 chr3L_9125001 RAL-21 1167 chr3L 9164680 9164713 chr3L 9166167 9166200 hobo 6 1484 5.0 0.0 2.5 1.7 1520 chr3L 9164680 intron Rdl - chr3L 9165440 intron Rdl - chr3L 9166200 intron Rdl - chr3L_6_9165001 chr3L_9165001 RAL-21 1168 chr3L 9232848 9232874 chr3L 9232943 9232968 8 95 1.0 6.5 3.8 1.7 120 chr3L 9232848 intergenic not near genes chr3L 9232908 intergenic not near genes chr3L 9232968 intergenic not near genes chr3L_8_9230001 chr3L_9230001 RAL-21 1169 chr3L 9270601 9270646 chr3L 9278376 9278421 roo 9 7775 3.0 3.0 3.0 2.2 7820 chr3L 9270601 intron GluRIB + chr3L 9274511 intron GluRIB + chr3L 9278421 exon GluRIB + chr3L_9_9270001 chr3L_9270001 RAL-21 1170 chr3L 9290033 9290070 chr3L 9290129 9290164 7 95 0.5 0.0 0.2 5.8 131 chr3L 9290033 intergenic not near genes chr3L 9290098 intergenic not near genes chr3L 9290164 intergenic not near genes chr3L_7_9290001 chr3L_9290001 RAL-21 1171 chr3L 9312706 9312726 chr3L 9312804 9312822 4 98 4.5 3.5 4.0 0.8 116 chr3L 9312706 intergenic not near genes chr3L 9312764 intergenic not near genes chr3L 9312822 intergenic not near genes chr3L_4_9310001 chr3L_9310001 RAL-21 1172 chr3L 9314046 9314055 chr3L 9314134 9314153 7 97 0.5 1.5 1.0 3.5 107 chr3L 9314046 intergenic not near genes chr3L 9314100 intergenic not near genes chr3L 9314153 intergenic not near genes chr3L_7_9310001 chr3L_9310001 RAL-21 1173 chr3L 9359569 9359622 chr3L 9359680 9359733 17 110 4.5 5.5 5.0 2.8 164 chr3L 9359569 3` UTR CG32039 + chr3L 9359651 3` UTR CG32039 + chr3L 9359733 3` UTR CG32039 + chr3L_17_9355001 chr3L_9355001 RAL-21 1174 chr3L 9443491 9443518 chr3L 9445302 9445305 S-element 7 1808 6.5 0.0 3.2 1.7 1814 chr3L 9443491 intron CG33926 + chr3L 9444398 intron CG33926 + chr3L 9445305 intron CG33926 + chr3L_7_9440001 chr3L_9440001 RAL-21 1175 chr3L 9465443 9465489 chr3L 9465550 9465584 9 98 2.0 3.5 2.8 2.4 141 chr3L 9465443 intron CG44838 + chr3L 9465514 intron CG44838 + chr3L 9465584 intron CG44838 + chr3L_9_9465001 chr3L_9465001 RAL-21 1176 chr3L 9498179 9498227 chr3L 9498276 9498324 17 96 4.5 4.0 4.2 3.3 145 chr3L 9498179 intron path - chr3L 9498252 intron path - chr3L 9498324 intron path - chr3L_17_9495001 chr3L_9495001 RAL-21 1177 chr3L 9501681 9501733 chr3L 9502187 9502239 roo 5 506 2.5 1.5 2.0 1.7 558 chr3L 9501681 intron path - chr3L 9501960 intron path - chr3L 9502239 intron path - chr3L_5_9500001 chr3L_9500001 RAL-21 1178 chr3L 9502595 9502644 chr3L 9502695 9502743 16 98 4.0 4.0 4.0 3.2 148 chr3L 9502595 intron path - chr3L 9502669 intron path - chr3L 9502743 intron path - chr3L_16_9500001 chr3L_9500001 RAL-21 1179 chr3L 9510890 9510948 chr3L 9511003 9511047 7 109 0.0 1.0 0.5 4.7 157 chr3L 9510890 intron RpS9 - chr3L 9510968 intron RpS9 - chr3L 9511047 intron RpS9 - chr3L_7_9510001 chr3L_9510001 RAL-21 1180 chr3L 9513426 9513474 chr3L 9513532 9513581 14 105 3.0 3.5 3.2 3.3 155 chr3L 9513426 intergenic CG33702 - chr3L 9513504 intergenic CG33702 - chr3L 9513581 intergenic CG33702 - chr3L_14_9510001 chr3L_9510001 RAL-21 1181 chr3L 9571894 9571936 chr3L 9572262 9572304 jockey 13 368 1.0 7.0 4.0 2.6 410 chr3L 9571894 intron CG42673 + chr3L 9572099 intron CG42673 + chr3L 9572304 intron CG42673 + chr3L_13_9570001 chr3L_9570001 RAL-21 1182 chr3L 9575894 9575937 chr3L 9580992 9581036 jockey 7 5092 3.0 4.5 3.8 1.5 5142 chr3L 9575894 intron CG42673 + chr3L 9578465 intron CG42673 + chr3L 9581036 intron CG42673 + chr3L_7_9575001 chr3L_9575001 RAL-21 1183 chr3L 9613867 9613920 chr3L 9613974 9614027 6 105 3.0 0.0 1.5 2.4 160 chr3L 9613867 3` UTR CG3280 + chr3L 9613947 intergenic CG3280 + chr3L 9614027 intergenic CG3280 + chr3L_6_9610001 chr3L_9610001 RAL-21 1184 chr3L 9637838 9637856 chr3L 9637940 9637958 5 102 5.5 3.0 4.2 1.0 120 chr3L 9637838 intron fry - chr3L 9637898 intron fry - chr3L 9637958 intron fry - chr3L_5_9635001 chr3L_9635001 RAL-21 1185 chr3L 9637859 9637884 chr3L 9637936 9637986 4 96 3.0 3.0 3.0 1.0 127 chr3L 9637859 intron fry - chr3L 9637922 intron fry - chr3L 9637986 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-21 1186 chr3L 9639008 9639058 chr3L 9639113 9639153 5 103 0.0 3.0 1.5 2.0 145 chr3L 9639008 intron,3` UTR fry -,CG8329 + chr3L 9639080 intron fry - chr3L 9639153 intron fry - chr3L_5_9635001 chr3L_9635001 RAL-21 1187 chr3L 9653879 9653907 chr3L 9655173 9655204 8 1297 6.0 4.0 5.0 1.3 1325 chr3L 9653879 intron,intron fry -,CG33696 + chr3L 9654542 intron,intron fry -,CG33696 + chr3L 9655204 intron,intron fry -,CG33696 + chr3L_8_9650001 chr3L_9650001 RAL-21 1188 chr3L 9665826 9665862 chr3L 9666062 9666098 11 235 3.5 6.0 4.8 1.9 272 chr3L 9665826 intron fry - chr3L 9665962 intron fry - chr3L 9666098 intron fry - chr3L_11_9665001 chr3L_9665001 RAL-21 1189 chr3L 9675838 9675878 chr3L 9675931 9675981 9 99 2.5 6.5 4.5 1.6 143 chr3L 9675838 intron fry - chr3L 9675910 intron fry - chr3L 9675981 intron fry - chr3L_9_9675001 chr3L_9675001 RAL-21 1190 chr3L 9699913 9699960 chr3L 9700018 9700066 14 102 2.5 6.5 4.5 2.5 153 chr3L 9699913 3` UTR UbcD4 + chr3L 9699990 3` UTR UbcD4 + chr3L 9700066 3` UTR UbcD4 + chr3L_14_9695001 chr3L_9695001 RAL-21 1191 chr3L 9741609 9741655 chr3L 9741721 9741766 9 112 2.0 5.5 3.8 1.9 157 chr3L 9741609 intron,intron CG42268 -,CR44348 + chr3L 9741688 intron,intron CG42268 -,CR44348 + chr3L 9741766 intron,intron CG42268 -,CR44348 + chr3L_9_9740001 chr3L_9740001 RAL-21 1192 chr3L 9750632 9750636 chr3L 9750729 9750732 5 97 3.5 1.5 2.5 1.4 100 chr3L 9750632 intron CG42268 - chr3L 9750682 intron CG42268 - chr3L 9750732 intron CG42268 - chr3L_5_9750001 chr3L_9750001 RAL-21 1193 chr3L 9824131 9824166 chr3L 9824230 9824245 13 97 3.5 0.0 1.8 4.6 114 chr3L 9824131 intron CG43897 + chr3L 9824188 intron CG43897 + chr3L 9824245 intron CG43897 + chr3L_13_9820001 chr3L_9820001 RAL-21 1194 chr3L 9829028 9829069 chr3L 9829130 9829167 12 101 3.5 4.5 4.0 2.4 139 chr3L 9829028 intron CG43897 + chr3L 9829098 intron CG43897 + chr3L 9829167 intron CG43897 + chr3L_12_9825001 chr3L_9825001 RAL-21 1195 chr3L 9831694 9831738 chr3L 9831793 9831839 10 100 0.5 6.5 3.5 2.2 145 chr3L 9831694 intron CG43897 + chr3L 9831766 intron CG43897 + chr3L 9831839 intron CG43897 + chr3L_10_9830001 chr3L_9830001 RAL-21 1196 chr3L 9835424 9835454 chr3L 9835534 9835564 9 110 1.0 5.0 3.0 2.2 140 chr3L 9835424 exon I-2 - chr3L 9835494 intron I-2 - chr3L 9835564 intron I-2 - chr3L_9_9835001 chr3L_9835001 RAL-21 1197 chr3L 9929648 9929686 chr3L 9938447 9938485 roo 7 8799 5.0 4.0 4.5 1.3 8837 chr3L 9929648 intron CG34356 + chr3L 9934066 intron CG34356 + chr3L 9938485 intron CG34356 + chr3L_7_9930001 chr3L_9930001 RAL-21 1198 chr3L 10003130 10003179 chr3L 10003247 10003296 10 116 3.5 3.5 3.5 2.2 166 chr3L 10003130 intron dpr6 + chr3L 10003213 intron dpr6 + chr3L 10003296 intron dpr6 + chr3L_10_10000001 chr3L_10000001 RAL-21 1199 chr3L 10004083 10004107 chr3L 10004181 10004207 4 99 0.5 1.0 0.8 2.2 124 chr3L 10004083 exon dpr6 + chr3L 10004145 intron dpr6 + chr3L 10004207 intron dpr6 + chr3L_4_10000001 chr3L_10000001 RAL-21 1200 chr3L 10007172 10007195 chr3L 10007294 10007318 6 123 6.5 4.0 5.2 1.0 146 chr3L 10007172 intron dpr6 + chr3L 10007245 intron dpr6 + chr3L 10007318 intron dpr6 + chr3L_6_10005001 chr3L_10005001 RAL-21 1201 chr3L 10019615 10019651 chr3L 10019893 10019920 7 275 3.0 0.0 1.5 2.8 305 chr3L 10019615 intron dpr6 + chr3L 10019768 intron dpr6 + chr3L 10019920 intron dpr6 + chr3L_7_10015001 chr3L_10015001 RAL-21 1202 chr3L 10082551 10082577 chr3L 10082653 10082679 6 102 0.5 0.5 0.5 4.0 128 chr3L 10082551 intron dpr6 + chr3L 10082615 intron dpr6 + chr3L 10082679 intron dpr6 + chr3L_6_10080001 chr3L_10080001 RAL-21 1203 chr3L 10186653 10186664 chr3L 10186766 10186777 4 113 7.0 0.0 3.5 0.9 124 chr3L 10186653 intergenic not near genes chr3L 10186715 intergenic not near genes chr3L 10186777 intergenic not near genes chr3L_4_10185001 chr3L_10185001 RAL-21 1204 chr3L 10189743 10189780 chr3L 10190164 10190212 15 429 2.5 5.5 4.0 3.0 469 chr3L 10189743 intergenic not near genes chr3L 10189978 intergenic ect - chr3L 10190212 intergenic ect - chr3L_15_10185001 chr3L_10185001 RAL-21 1205 chr3L 10214713 10214829 chr3L 10214820 10214929 11 121 0.0 0.0 0.0 11.0 216 chr3L 10214713 intergenic not near genes chr3L 10214821 intergenic not near genes chr3L 10214929 intergenic not near genes chr3L_11_10210001 chr3L_10210001 RAL-21 1206 chr3L 10222747 10222776 chr3L 10222847 10222875 8 99 1.0 5.0 3.0 2.0 128 chr3L 10222747 intron scramb1 - chr3L 10222811 intron scramb1 - chr3L 10222875 intron scramb1 - chr3L_8_10220001 chr3L_10220001 RAL-21 1207 chr3L 10250328 10250361 chr3L 10250424 10250459 9 102 0.0 4.0 2.0 3.0 131 chr3L 10250328 intergenic not near genes chr3L 10250394 intergenic not near genes chr3L 10250459 intergenic not near genes chr3L_9_10250001 chr3L_10250001 RAL-21 1208 chr3L 10255364 10255402 chr3L 10255482 10255506 4 114 0.5 2.0 1.2 1.8 142 chr3L 10255364 intergenic not near genes chr3L 10255435 intergenic not near genes chr3L 10255506 intergenic not near genes chr3L_4_10255001 chr3L_10255001 RAL-21 1209 chr3L 10298653 10298702 chr3L 10298755 10298807 12 105 0.0 1.5 0.8 6.7 154 chr3L 10298653 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298807 intergenic not near genes chr3L_12_10295001 chr3L_10295001 RAL-21 1210 chr3L 10300035 10300060 chr3L 10300147 10300172 4 112 1.0 4.5 2.8 1.1 137 chr3L 10300035 intergenic not near genes chr3L 10300104 intergenic not near genes chr3L 10300172 intergenic not near genes chr3L_4_10300001 chr3L_10300001 RAL-21 1211 chr3L 10308738 10308773 chr3L 10308835 10308870 4 97 1.5 4.5 3.0 1.0 132 chr3L 10308738 intergenic not near genes chr3L 10308804 intergenic not near genes chr3L 10308870 intergenic not near genes chr3L_4_10305001 chr3L_10305001 RAL-21 1212 chr3L 10328107 10328127 chr3L 10328239 10328259 8 132 5.5 5.5 5.5 1.2 152 chr3L 10328107 intergenic not near genes chr3L 10328183 intergenic not near genes chr3L 10328259 intergenic not near genes chr3L_8_10325001 chr3L_10325001 RAL-21 1213 chr3L 10367498 10367516 chr3L 10367619 10367637 8 121 3.0 1.5 2.2 2.5 139 chr3L 10367498 intergenic CR44327 + chr3L 10367568 intergenic CR44327 + chr3L 10367637 intergenic CR44327 + chr3L_8_10365001 chr3L_10365001 RAL-21 1214 chr3L 10372373 10372387 chr3L 10372472 10372485 4 99 7.0 7.0 7.0 0.5 112 chr3L 10372373 intergenic not near genes chr3L 10372429 intergenic not near genes chr3L 10372485 intergenic not near genes chr3L_4_10370001 chr3L_10370001 RAL-21 1215 chr3L 10414928 10414972 chr3L 10417316 10417364 Doc 8 2391 5.5 4.5 5.0 1.3 2436 chr3L 10414928 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417364 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-21 1216 chr3L 10417556 10417592 chr3L 10417652 10417659 4 89 4.5 2.5 3.5 0.9 103 chr3L 10417556 intergenic not near genes chr3L 10417608 intergenic not near genes chr3L 10417659 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-21 1217 chr3L 10518561 10518609 chr3L 10518716 10518748 22 154 2.0 2.5 2.2 6.9 187 chr3L 10518561 intron A2bp1 + chr3L 10518654 intron A2bp1 + chr3L 10518748 intron A2bp1 + chr3L_22_10515001 chr3L_10515001 RAL-21 1218 chr3L 10538680 10538723 chr3L 10538779 10538822 7 99 1.0 3.0 2.0 2.3 142 chr3L 10538680 intron A2bp1 + chr3L 10538751 intron A2bp1 + chr3L 10538822 intron A2bp1 + chr3L_7_10535001 chr3L_10535001 RAL-21 1219 chr3L 10551448 10551490 chr3L 10551554 10551597 9 106 0.0 4.5 2.2 2.8 149 chr3L 10551448 intron A2bp1 + chr3L 10551522 intron A2bp1 + chr3L 10551597 intron A2bp1 + chr3L_9_10550001 chr3L_10550001 RAL-21 1220 chr3L 10593618 10593668 chr3L 10593798 10593848 7 180 3.0 4.5 3.8 1.5 230 chr3L 10593618 intergenic A2bp1 + chr3L 10593733 intergenic A2bp1 + chr3L 10593848 intergenic A2bp1 + chr3L_7_10590001 chr3L_10590001 RAL-21 1221 chr3L 10600436 10600477 chr3L 10600538 10600579 7 101 3.5 2.0 2.8 1.8 143 chr3L 10600436 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600579 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-21 1222 chr3L 10614753 10614797 chr3L 10614858 10614896 6 100 0.0 3.5 1.8 2.1 143 chr3L 10614753 intergenic not near genes chr3L 10614824 intergenic not near genes chr3L 10614896 intergenic not near genes chr3L_6_10610001 chr3L_10610001 RAL-21 1223 chr3L 10621840 10621878 chr3L 10621947 10621985 5 107 3.5 4.0 3.8 1.0 145 chr3L 10621840 intergenic not near genes chr3L 10621912 intergenic not near genes chr3L 10621985 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-21 1224 chr3L 10658068 10658104 chr3L 10658165 10658193 10 96 0.5 6.5 3.5 2.2 125 chr3L 10658068 intron CG32066 - chr3L 10658130 intron CG32066 - chr3L 10658193 intron CG32066 - chr3L_10_10655001 chr3L_10655001 RAL-21 1225 chr3L 10735813 10735824 chr3L 10735922 10735933 5 109 7.0 2.0 4.5 0.9 120 chr3L 10735813 intergenic not near genes chr3L 10735873 intergenic not near genes chr3L 10735933 intergenic not near genes chr3L_5_10735001 chr3L_10735001 RAL-21 1226 chr3L 10753926 10753974 chr3L 10754222 10754268 13 293 3.5 3.0 3.2 3.1 342 chr3L 10753926 intergenic not near genes chr3L 10754097 intergenic not near genes chr3L 10754268 intergenic not near genes chr3L_13_10750001 chr3L_10750001 RAL-21 1227 chr3L 10795044 10795070 chr3L 10795144 10795170 6 100 5.5 0.0 2.8 1.6 126 chr3L 10795044 5` UTR CR44546 + chr3L 10795107 5` UTR CR44546 + chr3L 10795170 5` UTR CR44546 + chr3L_6_10795001 chr3L_10795001 RAL-21 1228 chr3L 10889218 10889259 chr3L 10889307 10889341 8 91 5.0 4.0 4.5 1.5 123 chr3L 10889218 intergenic not near genes chr3L 10889280 intergenic not near genes chr3L 10889341 intergenic not near genes chr3L_8_10885001 chr3L_10885001 RAL-21 1229 chr3L 10956453 10956468 chr3L 10956590 10956601 6 133 1.5 3.0 2.2 1.9 148 chr3L 10956453 intergenic not near genes chr3L 10956527 intergenic not near genes chr3L 10956601 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-21 1230 chr3L 10956999 10957006 chr3L 10957095 10957101 6 95 3.0 4.5 3.8 1.2 102 chr3L 10956999 intergenic not near genes chr3L 10957050 intergenic not near genes chr3L 10957101 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-21 1231 chr3L 10957009 10957034 chr3L 10957092 10957119 7 86 2.0 4.5 3.2 1.7 110 chr3L 10957009 intergenic not near genes chr3L 10957064 intergenic not near genes chr3L 10957119 intergenic not near genes chr3L_7_10955001 chr3L_10955001 RAL-21 1232 chr3L 11087046 11087088 chr3L 11088854 11088897 S-element 8 1808 0.5 1.0 0.8 4.4 1851 chr3L 11087046 intron JIL-1 - chr3L 11087972 intron JIL-1 - chr3L 11088897 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-21 1233 chr3L 11127933 11127950 chr3L 11128070 11128087 4 137 1.5 4.0 2.8 1.1 154 chr3L 11127933 intron CG42575 + chr3L 11128010 intron CG42575 + chr3L 11128087 intron CG42575 + chr3L_4_11125001 chr3L_11125001 RAL-21 1234 chr3L 11264444 11264493 chr3L 11271416 11271465 17.6 10 6971 3.0 4.0 3.5 2.2 7021 chr3L 11264444 intergenic not near genes chr3L 11267954 intergenic not near genes chr3L 11271465 intergenic not near genes chr3L_10_11265001 chr3L_11265001 RAL-21 1235 chr3L 11299641 11299690 chr3L 11299736 11299787 16 97 1.5 6.5 4.0 3.2 146 chr3L 11299641 intergenic not near genes chr3L 11299714 intergenic not near genes chr3L 11299787 intergenic not near genes chr3L_16_11295001 chr3L_11295001 RAL-21 1236 chr3L 11304818 11304836 chr3L 11304935 11304952 7 117 5.0 0.0 2.5 2.0 134 chr3L 11304818 intergenic not near genes chr3L 11304885 intergenic not near genes chr3L 11304952 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-21 1237 chr3L 11329690 11329722 chr3L 11332902 11332947 jockey 5 3216 2.0 1.5 1.8 1.8 3257 chr3L 11329690 intergenic not near genes chr3L 11331318 intergenic not near genes chr3L 11332947 intergenic not near genes chr3L_5_11330001 chr3L_11330001 RAL-21 1238 chr3L 11433766 11433811 chr3L 11433865 11433911 11 99 1.0 3.0 2.0 3.7 145 chr3L 11433766 intergenic not near genes chr3L 11433838 intergenic not near genes chr3L 11433911 intergenic not near genes chr3L_11_11430001 chr3L_11430001 RAL-21 1239 chr3L 11471561 11471609 chr3L 11471659 11471707 7 95 2.5 3.5 3.0 1.8 146 chr3L 11471561 intergenic not near genes chr3L 11471634 intergenic not near genes chr3L 11471707 intergenic not near genes chr3L_7_11470001 chr3L_11470001 RAL-21 1240 chr3L 11474606 11474650 chr3L 11474715 11474759 13 109 6.0 1.0 3.5 2.9 153 chr3L 11474606 intergenic Vha16-2 + chr3L 11474682 intergenic Vha16-2 + chr3L 11474759 intergenic Vha16-2 + chr3L_13_11470001 chr3L_11470001 RAL-21 1241 chr3L 11579545 11579584 chr3L 11579671 11579704 9 125 3.5 5.5 4.5 1.6 159 chr3L 11579545 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579704 intergenic CG43390 - chr3L_9_11575001 chr3L_11575001 RAL-21 1242 chr3L 11648494 11648511 chr3L 11648597 11648613 7 103 10.0 0.0 5.0 1.2 119 chr3L 11648494 intergenic RIOK1 -,CG7339 + chr3L 11648554 intergenic RIOK1 -,CG7339 + chr3L 11648613 intergenic RIOK1 -,CG7339 + chr3L_7_11645001 chr3L_11645001 RAL-21 1243 chr3L 11659412 11659446 chr3L 11659757 11659780 6 338 2.5 4.0 3.2 1.4 368 chr3L 11659412 intron CG32085 - chr3L 11659596 intron CG32085 - chr3L 11659780 intron CG32085 - chr3L_6_11655001 chr3L_11655001 RAL-21 1244 chr3L 11673956 11673986 chr3L 11674052 11674064 4 92 4.5 0.0 2.2 1.2 108 chr3L 11673956 intron CG32085 - chr3L 11674010 intron CG32085 - chr3L 11674064 intron CG32085 - chr3L_4_11670001 chr3L_11670001 RAL-21 1245 chr3L 11678074 11678122 chr3L 11678181 11678228 11 106 1.5 5.0 3.2 2.6 154 chr3L 11678074 intron CG32085 - chr3L 11678151 intron CG32085 - chr3L 11678228 intron CG32085 - chr3L_11_11675001 chr3L_11675001 RAL-21 1246 chr3L 11723065 11723109 chr3L 11727879 11727913 Doc 12 4814 3.0 6.5 4.8 2.1 4848 chr3L 11723065 3` UTR Bmcp + chr3L 11725489 intron Bmcp + chr3L 11727913 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 RAL-21 1247 chr3L 11743996 11744019 chr3L 11744124 11744147 6 128 5.0 2.0 3.5 1.3 151 chr3L 11743996 exon CG6024 - chr3L 11744072 intron CG6024 - chr3L 11744147 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-21 1248 chr3L 11811436 11811487 chr3L 11811534 11811585 12 97 2.0 5.5 3.8 2.5 149 chr3L 11811436 intron CG42255 - chr3L 11811510 intron CG42255 - chr3L 11811585 exon CG42255 - chr3L_12_11810001 chr3L_11810001 RAL-21 1249 chr3L 11849315 11849355 chr3L 11849435 11849475 6 120 0.5 5.5 3.0 1.5 160 chr3L 11849315 intergenic not near genes chr3L 11849395 intergenic not near genes chr3L 11849475 intergenic not near genes chr3L_6_11845001 chr3L_11845001 RAL-21 1250 chr3L 11887239 11887289 chr3L 11887356 11887414 4 119 3.0 0.0 1.5 1.6 175 chr3L 11887239 intron CG44837 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887414 intron,3` UTR CG44837 -,CG5897 - chr3L_4_11885001 chr3L_11885001 RAL-21 1251 chr3L 11943484 11943521 chr3L 11943605 11943624 12 119 4.5 4.5 4.5 2.2 140 chr3L 11943484 3` UTR Rpt4R + chr3L 11943554 intergenic Rpt4R +,CG5883 - chr3L 11943624 intergenic CG5883 -,Rpt4R + chr3L_12_11940001 chr3L_11940001 RAL-21 1252 chr3L 11974315 11974367 chr3L 11974415 11974467 15 98 2.5 7.0 4.8 2.6 152 chr3L 11974315 intergenic not near genes chr3L 11974391 intergenic not near genes chr3L 11974467 intergenic CG14125 + chr3L_15_11970001 chr3L_11970001 RAL-21 1253 chr3L 12019321 12019349 chr3L 12019454 12019482 8 133 2.0 3.5 2.8 2.1 161 chr3L 12019321 intron rols - chr3L 12019402 intron rols - chr3L 12019482 intron rols - chr3L_8_12015001 chr3L_12015001 RAL-21 1254 chr3L 12052694 12052738 chr3L 12052803 12052847 13 108 3.0 5.0 4.0 2.6 153 chr3L 12052694 intron rols - chr3L 12052770 intron rols - chr3L 12052847 intron rols - chr3L_13_12050001 chr3L_12050001 RAL-21 1255 chr3L 12067072 12067076 chr3L 12067171 12067175 5 98 0.0 0.0 0.0 5.0 103 chr3L 12067072 intergenic Sema-5c - chr3L 12067124 intergenic Sema-5c - chr3L 12067175 intergenic Sema-5c - chr3L_5_12065001 chr3L_12065001 RAL-21 1256 chr3L 12089062 12089106 chr3L 12089162 12089206 9 100 4.0 1.5 2.8 2.4 144 chr3L 12089062 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089206 3` UTR CG17154 + chr3L_9_12085001 chr3L_12085001 RAL-21 1257 chr3L 12092380 12092421 chr3L 12092476 12092510 8 95 1.5 2.5 2.0 2.7 130 chr3L 12092380 intergenic not near genes chr3L 12092445 intergenic not near genes chr3L 12092510 intergenic not near genes chr3L_8_12090001 chr3L_12090001 RAL-21 1258 chr3L 12119743 12119789 chr3L 12119860 12119906 18 114 5.0 5.5 5.2 2.9 163 chr3L 12119743 3` UTR ssp + chr3L 12119824 intergenic ssp +,CG11560 + chr3L 12119906 intergenic CG11560 +,ssp + chr3L_18_12115001 chr3L_12115001 RAL-21 1259 chr3L 12223851 12223894 chr3L 12223948 12223989 9 96 5.0 2.0 3.5 2.0 138 chr3L 12223851 intron app - chr3L 12223920 intron app - chr3L 12223989 intron app - chr3L_9_12220001 chr3L_12220001 RAL-21 1260 chr3L 12231379 12231425 chr3L 12231658 12231704 13 280 30.0 25.0 27.5 0.5 325 chr3L 12231379 intron app - chr3L 12231542 intron app - chr3L 12231704 intron app - chr3L_13_12230001 chr3L_12230001 RAL-21 1261 chr3L 12369516 12369569 chr3L 12369626 12369679 12 110 3.5 3.0 3.2 2.9 163 chr3L 12369516 intron Ncc69 - chr3L 12369598 intron Ncc69 - chr3L 12369679 intron Ncc69 - chr3L_12_12365001 chr3L_12365001 RAL-21 1262 chr3L 12381521 12381547 chr3L 12381619 12381645 5 98 0.5 0.0 0.2 4.2 124 chr3L 12381521 intron Ncc69 - chr3L 12381583 intron Ncc69 - chr3L 12381645 intron Ncc69 - chr3L_5_12380001 chr3L_12380001 RAL-21 1263 chr3L 12388051 12388102 chr3L 12388155 12388206 14 103 2.5 4.0 3.2 3.3 155 chr3L 12388051 intron Ncc69 - chr3L 12388128 intron Ncc69 - chr3L 12388206 intron Ncc69 - chr3L_14_12385001 chr3L_12385001 RAL-21 1264 chr3L 12412901 12412923 chr3L 12413003 12413025 6 102 4.0 1.5 2.8 1.6 124 chr3L 12412901 intron CG32103 - chr3L 12412963 intron CG32103 - chr3L 12413025 intron CG32103 - chr3L_6_12410001 chr3L_12410001 RAL-21 1265 chr3L 12467239 12467276 chr3L 12467344 12467351 11 102 0.0 4.5 2.2 3.4 112 chr3L 12467239 intron eyg - chr3L 12467295 intron eyg - chr3L 12467351 intron eyg - chr3L_11_12465001 chr3L_12465001 RAL-21 1266 chr3L 12565407 12565441 chr3L 12565495 12565541 11 98 2.0 3.5 2.8 2.9 134 chr3L 12565407 intron sowah - chr3L 12565474 intron sowah - chr3L 12565541 intron sowah - chr3L_11_12565001 chr3L_12565001 RAL-21 1267 chr3L 12578044 12578074 chr3L 12578147 12578182 6 107 2.0 0.0 1.0 3.0 138 chr3L 12578044 intergenic not near genes chr3L 12578113 intergenic not near genes chr3L 12578182 intergenic not near genes chr3L_6_12575001 chr3L_12575001 RAL-21 1268 chr3L 12610975 12611018 chr3L 12611241 12611284 11 264 2.5 5.0 3.8 2.3 309 chr3L 12610975 intron caup + chr3L 12611130 intron caup + chr3L 12611284 intron caup + chr3L_11_12610001 chr3L_12610001 RAL-21 1269 chr3L 12614579 12614599 chr3L 12614737 12614757 4 158 0.0 4.5 2.2 1.2 178 chr3L 12614579 intron caup + chr3L 12614668 intron caup + chr3L 12614757 intron caup + chr3L_4_12610001 chr3L_12610001 RAL-21 1270 chr3L 12626132 12626158 chr3L 12626261 12626287 7 127 1.5 1.5 1.5 2.8 155 chr3L 12626132 intergenic not near genes chr3L 12626210 intergenic not near genes chr3L 12626287 intergenic not near genes chr3L_7_12625001 chr3L_12625001 RAL-21 1271 chr3L 12647933 12647972 chr3L 12648028 12648068 7 95 2.0 3.5 2.8 1.8 135 chr3L 12647933 5` UTR CR32111 + chr3L 12648000 5` UTR CR32111 + chr3L 12648068 5` UTR CR32111 + chr3L_7_12645001 chr3L_12645001 RAL-21 1272 chr3L 12720318 12720355 chr3L 12720423 12720460 12 104 3.0 7.0 5.0 2.0 142 chr3L 12720318 intergenic not near genes chr3L 12720389 intergenic not near genes chr3L 12720460 intergenic not near genes chr3L_12_12720001 chr3L_12720001 RAL-21 1273 chr3L 12801962 12802012 chr3L 12802055 12802108 8 91 1.5 3.5 2.5 2.3 146 chr3L 12801962 intron Atg1 - chr3L 12802035 intron Atg1 - chr3L 12802108 intron Atg1 - chr3L_8_12800001 chr3L_12800001 RAL-21 1274 chr3L 12874930 12874955 chr3L 12877225 12877267 jockey 10 2309 1.5 6.0 3.8 2.1 2337 chr3L 12874930 intergenic not near genes chr3L 12876098 intergenic not near genes chr3L 12877267 intergenic not near genes chr3L_10_12875001 chr3L_12875001 RAL-21 1275 chr3L 12919259 12919286 chr3L 12924747 12924754 Rt1c 4 5482 6.5 2.5 4.5 0.7 5495 chr3L 12919259 intergenic not near genes chr3L 12922006 intergenic not near genes chr3L 12924754 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-21 1276 chr3L 12957779 12957785 chr3L 12962276 12962287 copia 4 4501 6.5 1.5 4.0 0.8 4508 chr3L 12957779 intergenic not near genes chr3L 12960033 intergenic not near genes chr3L 12962287 intergenic not near genes chr3L_4_12960001 chr3L_12960001 RAL-21 1277 chr3L 12957795 12957815 chr3L 12962268 12962317 copia 9 4498 5.0 1.0 3.0 2.2 4522 chr3L 12957795 intergenic not near genes chr3L 12960056 intergenic not near genes chr3L 12962317 intergenic not near genes chr3L_9_12960001 chr3L_12960001 RAL-21 1278 chr3L 12978742 12978789 chr3L 12978841 12978858 6 90 1.0 0.0 0.5 4.0 116 chr3L 12978742 intergenic not near genes chr3L 12978800 intergenic not near genes chr3L 12978858 intergenic not near genes chr3L_6_12975001 chr3L_12975001 RAL-21 1279 chr3L 13007678 13007688 chr3L 13007777 13007787 4 99 2.5 4.0 3.2 1.0 109 chr3L 13007678 exon CG11263 + chr3L 13007732 3` UTR CG11263 + chr3L 13007787 3` UTR CG11263 + chr3L_4_13005001 chr3L_13005001 RAL-21 1280 chr3L 13007689 13007705 chr3L 13007773 13007804 4 93 2.5 3.5 3.0 1.0 115 chr3L 13007689 exon CG11263 + chr3L 13007746 3` UTR CG11263 + chr3L 13007804 3` UTR CG11263 + chr3L_4_13005001 chr3L_13005001 RAL-21 1281 chr3L 13050564 13050596 chr3L 13050663 13050664 6 92 3.5 6.0 4.8 1.0 100 chr3L 13050564 intergenic not near genes chr3L 13050614 intergenic not near genes chr3L 13050664 intergenic not near genes chr3L_6_13050001 chr3L_13050001 RAL-21 1282 chr3L 13069538 13069589 chr3L 13069637 13069687 12 99 3.5 3.5 3.5 2.7 149 chr3L 13069538 intergenic not near genes chr3L 13069612 intergenic not near genes chr3L 13069687 intergenic not near genes chr3L_12_13065001 chr3L_13065001 RAL-21 1283 chr3L 13082753 13082804 chr3L 13082866 13082904 15 106 3.0 3.5 3.2 3.6 151 chr3L 13082753 intergenic CR43652 - chr3L 13082828 intergenic CR43652 - chr3L 13082904 intergenic CR43652 - chr3L_15_13080001 chr3L_13080001 RAL-21 1284 chr3L 13085042 13085076 chr3L 13085141 13085175 11 97 2.0 4.5 3.2 2.6 133 chr3L 13085042 intergenic not near genes chr3L 13085108 intergenic not near genes chr3L 13085175 intergenic not near genes chr3L_11_13085001 chr3L_13085001 RAL-21 1285 chr3L 13142132 13142177 chr3L 13142265 13142310 12 132 1.5 4.5 3.0 3.0 178 chr3L 13142132 intergenic not near genes chr3L 13142221 intergenic not near genes chr3L 13142310 intergenic not near genes chr3L_12_13140001 chr3L_13140001 RAL-21 1286 chr3L 13174244 13174273 chr3L 13174356 13174385 8 111 2.0 3.0 2.5 2.3 141 chr3L 13174244 intergenic snky + chr3L 13174314 intergenic snky + chr3L 13174385 intergenic snky + chr3L_8_13170001 chr3L_13170001 RAL-21 1287 chr3L 13194046 13194099 chr3L 13194145 13194198 11 99 2.5 2.0 2.2 3.4 152 chr3L 13194046 intergenic not near genes chr3L 13194122 intergenic not near genes chr3L 13194198 intergenic not near genes chr3L_11_13190001 chr3L_13190001 RAL-21 1288 chr3L 13206135 13206262 chr3L 13206239 13206363 10 99 0.0 0.0 0.0 10.0 228 chr3L 13206135 intergenic not near genes chr3L 13206249 intergenic not near genes chr3L 13206363 intergenic not near genes chr3L_10_13205001 chr3L_13205001 RAL-21 1289 chr3L 13208343 13208353 chr3L 13208442 13208444 5 96 2.0 0.0 1.0 2.5 101 chr3L 13208343 intergenic CR45096 - chr3L 13208394 intergenic CR45096 - chr3L 13208444 intergenic CR45096 - chr3L_5_13205001 chr3L_13205001 RAL-21 1290 chr3L 13229403 13229441 chr3L 13229519 13229555 6 116 1.5 3.5 2.5 1.7 152 chr3L 13229403 intron caps + chr3L 13229479 intron caps + chr3L 13229555 intron caps + chr3L_6_13225001 chr3L_13225001 RAL-21 1291 chr3L 13257249 13257285 chr3L 13257352 13257383 5 101 3.0 2.5 2.8 1.3 134 chr3L 13257249 intron caps + chr3L 13257316 intron caps + chr3L 13257383 intron caps + chr3L_5_13255001 chr3L_13255001 RAL-21 1292 chr3L 13267272 13267309 chr3L 13267405 13267441 9 129 2.0 2.0 2.0 3.0 169 chr3L 13267272 intron caps + chr3L 13267356 intron caps + chr3L 13267441 intron caps + chr3L_9_13265001 chr3L_13265001 RAL-21 1293 chr3L 13279842 13279871 chr3L 13279939 13279956 5 95 0.5 3.0 1.8 1.8 114 chr3L 13279842 intergenic caps + chr3L 13279899 intergenic caps + chr3L 13279956 intergenic caps + chr3L_5_13275001 chr3L_13275001 RAL-21 1294 chr3L 13301243 13301252 chr3L 13301345 13301349 4 101 0.0 0.0 0.0 4.0 106 chr3L 13301243 intergenic SP + chr3L 13301296 intergenic SP + chr3L 13301349 intergenic SP + chr3L_4_13300001 chr3L_13300001 RAL-21 1295 chr3L 13315837 13315857 chr3L 13315944 13315964 6 106 3.0 5.0 4.0 1.2 127 chr3L 13315837 intergenic not near genes chr3L 13315900 intergenic not near genes chr3L 13315964 intergenic not near genes chr3L_6_13315001 chr3L_13315001 RAL-21 1296 chr3L 13338613 13338660 chr3L 13338710 13338757 10 97 4.5 5.0 4.8 1.7 144 chr3L 13338613 intergenic not near genes chr3L 13338685 intergenic not near genes chr3L 13338757 intergenic not near genes chr3L_10_13335001 chr3L_13335001 RAL-21 1297 chr3L 13477001 13477032 chr3L 13477098 13477129 7 97 0.0 2.0 1.0 3.5 128 chr3L 13477001 intergenic not near genes chr3L 13477065 intergenic stv + chr3L 13477129 intergenic stv + chr3L_7_13475001 chr3L_13475001 RAL-21 1298 chr3L 13525141 13525181 chr3L 13532956 13532997 roo 8 7813 8.0 2.5 5.2 1.3 7856 chr3L 13525141 intergenic not near genes chr3L 13529069 intergenic not near genes chr3L 13532997 intergenic not near genes chr3L_8_13525001 chr3L_13525001 RAL-21 1299 chr3L 13645205 13645227 chr3L 13645292 13645329 7 93 2.5 2.0 2.2 2.2 124 chr3L 13645205 intron bru-3 - chr3L 13645267 intron bru-3 - chr3L 13645329 intron bru-3 - chr3L_7_13645001 chr3L_13645001 RAL-21 1300 chr3L 13677512 13677746 chr3L 13677609 13677897 13 100 0.0 3.0 1.5 5.2 385 chr3L 13677512 intron bru-3 - chr3L 13677704 intron bru-3 - chr3L 13677897 intron bru-3 - chr3L_13_13675001 chr3L_13675001 RAL-21 1301 chr3L 13740020 13740030 chr3L 13740132 13740142 4 112 4.0 4.0 4.0 0.8 122 chr3L 13740020 intron bru-3 - chr3L 13740081 intron bru-3 - chr3L 13740142 intron bru-3 - chr3L_4_13740001 chr3L_13740001 RAL-21 1302 chr3L 13766891 13766917 chr3L 13767009 13767020 7 114 5.0 3.0 4.0 1.4 129 chr3L 13766891 intron bru-3 - chr3L 13766956 intron bru-3 - chr3L 13767020 intron bru-3 - chr3L_7_13765001 chr3L_13765001 RAL-21 1303 chr3L 13833993 13834009 chr3L 13834127 13834143 4 134 1.0 5.5 3.2 1.0 150 chr3L 13833993 intergenic not near genes chr3L 13834068 intergenic not near genes chr3L 13834143 intergenic not near genes chr3L_4_13830001 chr3L_13830001 RAL-21 1304 chr3L 13862401 13862440 chr3L 13862779 13862823 7 378 3.0 2.0 2.5 2.0 422 chr3L 13862401 intron CG8745 - chr3L 13862612 intron CG8745 - chr3L 13862823 intron CG8745 - chr3L_7_13860001 chr3L_13860001 RAL-21 1305 chr3L 13884366 13884387 chr3L 13884477 13884498 6 111 5.0 4.5 4.8 1.0 132 chr3L 13884366 intron dysc - chr3L 13884432 intron dysc - chr3L 13884498 intron dysc - chr3L_6_13880001 chr3L_13880001 RAL-21 1306 chr3L 13894975 13895021 chr3L 13895362 13895408 13 381 2.0 4.0 3.0 3.2 433 chr3L 13894975 intron dysc - chr3L 13895192 intron dysc - chr3L 13895408 intron dysc - chr3L_13_13895001 chr3L_13895001 RAL-21 1307 chr3L 13936452 13936651 chr3L 13936552 13936802 6 135 2.0 0.5 1.2 2.7 350 chr3L 13936452 intergenic not near genes chr3L 13936627 intergenic not near genes chr3L 13936802 intergenic not near genes chr3L_6_13935001 chr3L_13935001 RAL-21 1308 chr3L 13948636 13948651 chr3L 13948708 13948718 4 79 1.5 5.0 3.2 1.0 82 chr3L 13948636 intron CG32137 + chr3L 13948677 intron CG32137 + chr3L 13948718 intron CG32137 + chr3L_4_13945001 chr3L_13945001 RAL-21 1309 chr3L 13964934 13964979 chr3L 13965117 13965162 20 181 0.5 2.0 1.2 9.1 228 chr3L 13964934 intergenic Meics -,Nxf3 +,ssp2 + chr3L 13965048 intergenic Nxf3 +,ssp2 +,Meics - chr3L 13965162 intergenic Nxf3 +,ssp2 +,Meics - chr3L_20_13965001 chr3L_13965001 RAL-21 1310 chr3L 14065424 14065477 chr3L 14065552 14065605 12 125 5.0 3.0 4.0 2.4 181 chr3L 14065424 intron CG32138 + chr3L 14065514 intron CG32138 + chr3L 14065605 intron CG32138 + chr3L_12_14065001 chr3L_14065001 RAL-21 1311 chr3L 14092725 14092740 chr3L 14092828 14092838 5 102 4.5 1.0 2.8 1.3 113 chr3L 14092725 intergenic not near genes chr3L 14092782 intergenic not near genes chr3L 14092838 intergenic not near genes chr3L_5_14090001 chr3L_14090001 RAL-21 1312 chr3L 14175346 14175377 chr3L 14175506 14175535 10 166 4.0 3.0 3.5 2.2 189 chr3L 14175346 intergenic D - chr3L 14175440 intergenic D - chr3L 14175535 intergenic D - chr3L_10_14175001 chr3L_14175001 RAL-21 1313 chr3L 14214826 14214871 chr3L 14214922 14214976 11 101 0.0 2.0 1.0 5.5 150 chr3L 14214826 intron nuf + chr3L 14214901 intron nuf + chr3L 14214976 intron nuf + chr3L_11_14210001 chr3L_14210001 RAL-21 1314 chr3L 14239979 14240006 chr3L 14240096 14240117 6 116 0.0 4.5 2.2 1.9 138 chr3L 14239979 intergenic not near genes chr3L 14240048 intergenic not near genes chr3L 14240117 intergenic not near genes chr3L_6_14240001 chr3L_14240001 RAL-21 1315 chr3L 14245556 14245592 chr3L 14245670 14245704 1360 5 113 5.0 4.5 4.8 0.9 148 chr3L 14245556 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245704 intergenic CR44561 -,CR44560 + chr3L_5_14245001 chr3L_14245001 RAL-21 1316 chr3L 14295978 14296013 chr3L 14296484 14296519 roo 7 506 1.0 5.5 3.2 1.7 541 chr3L 14295978 intron fz + chr3L 14296248 intron fz + chr3L 14296519 intron fz + chr3L_7_14295001 chr3L_14295001 RAL-21 1317 chr3L 14312033 14312055 chr3L 14316841 14316889 X-element 4 4826 1.5 4.0 2.8 1.1 4856 chr3L 14312033 exon fz + chr3L 14314461 intron fz + chr3L 14316889 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-21 1318 chr3L 14326951 14326993 chr3L 14327107 14327129 16 153 0.5 1.0 0.8 8.9 178 chr3L 14326951 intron fz + chr3L 14327040 intron fz + chr3L 14327129 intron fz + chr3L_16_14325001 chr3L_14325001 RAL-21 1319 chr3L 14338283 14338330 chr3L 14338398 14338440 12 114 2.0 2.0 2.0 4.0 157 chr3L 14338283 intron fz + chr3L 14338362 intron fz + chr3L 14338440 intron fz + chr3L_12_14335001 chr3L_14335001 RAL-21 1320 chr3L 14339704 14339752 chr3L 14340022 14340055 6 310 2.0 4.5 3.2 1.4 351 chr3L 14339704 intron fz + chr3L 14339880 intron fz + chr3L 14340055 intron fz + chr3L_6_14335001 chr3L_14335001 RAL-21 1321 chr3L 14356498 14356536 chr3L 14356598 14356636 7 98 3.5 3.5 3.5 1.6 138 chr3L 14356498 intron fz + chr3L 14356567 intron fz + chr3L 14356636 intron fz + chr3L_7_14355001 chr3L_14355001 RAL-21 1322 chr3L 14411850 14411881 chr3L 14411949 14411980 7 99 4.5 4.0 4.2 1.3 130 chr3L 14411850 intron CG3919 + chr3L 14411915 intron CG3919 + chr3L 14411980 intron CG3919 + chr3L_7_14410001 chr3L_14410001 RAL-21 1323 chr3L 14468431 14468474 chr3L 14473657 14473700 copia 10 5225 3.0 2.5 2.8 2.6 5269 chr3L 14468431 intron bbg - chr3L 14471066 intron bbg - chr3L 14473700 intron bbg - chr3L_10_14470001 chr3L_14470001 RAL-21 1324 chr3L 14486001 14486029 chr3L 14486102 14486129 9 100 7.5 3.5 5.5 1.4 128 chr3L 14486001 intron bbg - chr3L 14486065 intron bbg - chr3L 14486129 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-21 1325 chr3L 14486030 14486045 chr3L 14486101 14486104 4 82 4.5 3.5 4.0 0.8 74 chr3L 14486030 intron bbg - chr3L 14486067 intron bbg - chr3L 14486104 intron bbg - chr3L_4_14485001 chr3L_14485001 RAL-21 1326 chr3L 14535313 14535352 chr3L 14535521 14535570 5 215 4.0 0.0 2.0 1.7 257 chr3L 14535313 intron bbg - chr3L 14535442 intron bbg - chr3L 14535570 intron bbg - chr3L_5_14535001 chr3L_14535001 RAL-21 1327 chr3L 14565729 14565777 chr3L 14565840 14565888 8 111 2.5 1.0 1.8 2.9 159 chr3L 14565729 intergenic not near genes chr3L 14565808 intergenic not near genes chr3L 14565888 intergenic not near genes chr3L_8_14565001 chr3L_14565001 RAL-21 1328 chr3L 14627191 14627218 chr3L 14627298 14627325 6 103 1.5 1.5 1.5 2.4 134 chr3L 14627191 intron CG9628 + chr3L 14627258 intron CG9628 + chr3L 14627325 intron CG9628 + chr3L_6_14625001 chr3L_14625001 RAL-21 1329 chr3L 14724810 14724830 chr3L 14724906 14724934 4 102 0.0 4.0 2.0 1.3 124 chr3L 14724810 intron ome + chr3L 14724872 intron ome + chr3L 14724934 intron ome + chr3L_4_14720001 chr3L_14720001 RAL-21 1330 chr3L 14804222 14804253 chr3L 14804477 14804508 4 255 6.5 5.0 5.8 0.6 286 chr3L 14804222 intergenic not near genes chr3L 14804365 intergenic not near genes chr3L 14804508 intergenic not near genes chr3L_4_14800001 chr3L_14800001 RAL-21 1331 chr3L 14896737 14896774 chr3L 14896827 14896870 7 93 4.0 3.0 3.5 1.6 133 chr3L 14896737 intergenic not near genes chr3L 14896804 intergenic not near genes chr3L 14896870 intergenic not near genes chr3L_7_14895001 chr3L_14895001 RAL-21 1332 chr3L 14913883 14913911 chr3L 14913980 14914008 6 94 4.5 2.0 3.2 1.4 125 chr3L 14913883 intron DCX-EMAP + chr3L 14913946 intron DCX-EMAP + chr3L 14914008 intron DCX-EMAP + chr3L_6_14910001 chr3L_14910001 RAL-21 1333 chr3L 14933428 14933459 chr3L 14933530 14933561 6 102 3.0 2.0 2.5 1.7 133 chr3L 14933428 intron DCX-EMAP + chr3L 14933494 intron DCX-EMAP + chr3L 14933561 intron DCX-EMAP + chr3L_6_14930001 chr3L_14930001 RAL-21 1334 chr3L 14957965 14957970 chr3L 14958084 14958089 4 119 2.0 0.0 1.0 2.0 124 chr3L 14957965 intergenic not near genes chr3L 14958027 intergenic not near genes chr3L 14958089 intergenic not near genes chr3L_4_14955001 chr3L_14955001 RAL-21 1335 chr3L 14970746 14970757 chr3L 14971076 14971087 F-element 5 330 9.5 4.0 6.8 0.6 341 chr3L 14970746 intergenic Tom + chr3L 14970916 intergenic not near genes chr3L 14971087 intergenic not near genes chr3L_5_14970001 chr3L_14970001 RAL-21 1336 chr3L 14973621 14973664 chr3L 14973714 14973764 6 97 2.0 3.0 2.5 1.7 143 chr3L 14973621 intergenic Brd + chr3L 14973692 intergenic Brd + chr3L 14973764 intergenic not near genes chr3L_6_14970001 chr3L_14970001 RAL-21 1337 chr3L 15035136 15035187 chr3L 15038016 15038032 26 2877 2.5 2.5 2.5 7.4 2896 chr3L 15035136 intron Sytbeta - chr3L 15036584 intron Sytbeta - chr3L 15038032 intron Sytbeta - chr3L_26_15035001 chr3L_15035001 RAL-21 1338 chr3L 15048118 15048162 chr3L 15048462 15048506 9 348 35.5 23.5 29.5 0.3 388 chr3L 15048118 intron Sytbeta - chr3L 15048312 intron Sytbeta - chr3L 15048506 intron Sytbeta - chr3L_9_15045001 chr3L_15045001 RAL-21 1339 chr3L 15085043 15085083 chr3L 15086216 15086269 1360 5 1183 2.0 2.5 2.2 1.6 1226 chr3L 15085043 intron cp309 - chr3L 15085656 intron cp309 - chr3L 15086269 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-21 1340 chr3L 15124296 15124328 chr3L 15124549 15124586 13 256 3.5 3.5 3.5 2.9 290 chr3L 15124296 intron,5` UTR Cep135 +,CG16959 - chr3L 15124441 intron,intron Cep135 +,CG16959 - chr3L 15124586 intron,intron Cep135 +,CG16959 - chr3L_13_15120001 chr3L_15120001 RAL-21 1341 chr3L 15193676 15193694 chr3L 15193865 15193883 10 189 4.5 4.0 4.2 1.9 207 chr3L 15193676 intergenic not near genes chr3L 15193780 intergenic not near genes chr3L 15193883 intergenic not near genes chr3L_10_15190001 chr3L_15190001 RAL-21 1342 chr3L 15193697 15193726 chr3L 15193864 15193915 13 186 3.0 4.0 3.5 2.9 218 chr3L 15193697 intergenic not near genes chr3L 15193806 intergenic not near genes chr3L 15193915 intergenic not near genes chr3L_13_15190001 chr3L_15190001 RAL-21 1343 chr3L 15257418 15257445 chr3L 15257651 15257678 4 233 5.5 3.0 4.2 0.8 260 chr3L 15257418 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257678 intergenic not near genes chr3L_4_15255001 chr3L_15255001 RAL-21 1344 chr3L 15295751 15295785 chr3L 15298614 15298648 gypsy5 10 2862 6.5 6.0 6.2 1.4 2897 chr3L 15295751 intergenic not near genes chr3L 15297200 intergenic not near genes chr3L 15298648 intergenic Best4 + chr3L_10_15295001 chr3L_15295001 RAL-21 1345 chr3L 15295789 15295795 chr3L 15298609 15298658 gypsy5 6 2854 3.5 6.0 4.8 1.0 2869 chr3L 15295789 intergenic not near genes chr3L 15297224 intergenic not near genes chr3L 15298658 intergenic Best4 + chr3L_6_15295001 chr3L_15295001 RAL-21 1346 chr3L 15333120 15333170 chr3L 15333220 15333264 7 98 2.0 1.5 1.8 2.5 144 chr3L 15333120 intergenic CR43247 + chr3L 15333192 intergenic CR43247 + chr3L 15333264 intergenic CR43247 + chr3L_7_15330001 chr3L_15330001 RAL-21 1347 chr3L 15348090 15348136 chr3L 15348268 15348287 10 175 5.0 4.5 4.8 1.7 197 chr3L 15348090 intergenic not near genes chr3L 15348188 intergenic not near genes chr3L 15348287 intergenic not near genes chr3L_10_15345001 chr3L_15345001 RAL-21 1348 chr3L 15384936 15384986 chr3L 15385084 15385112 13 142 4.0 1.5 2.8 3.4 176 chr3L 15384936 intergenic not near genes chr3L 15385024 intergenic not near genes chr3L 15385112 intergenic not near genes chr3L_13_15385001 chr3L_15385001 RAL-21 1349 chr3L 15393650 15393689 chr3L 15393872 15393898 12 221 7.5 5.5 6.5 1.6 248 chr3L 15393650 intergenic not near genes chr3L 15393774 intergenic not near genes chr3L 15393898 intergenic not near genes chr3L_12_15390001 chr3L_15390001 RAL-21 1350 chr3L 15423743 15423783 chr3L 15426607 15426647 opus 12 2864 6.5 6.0 6.2 1.7 2904 chr3L 15423743 intergenic not near genes chr3L 15425195 intergenic not near genes chr3L 15426647 intergenic not near genes chr3L_12_15425001 chr3L_15425001 RAL-21 1351 chr3L 15444639 15444685 chr3L 15444746 15444799 10 108 3.0 3.0 3.0 2.5 160 chr3L 15444639 intergenic not near genes chr3L 15444719 intergenic not near genes chr3L 15444799 intergenic not near genes chr3L_10_15440001 chr3L_15440001 RAL-21 1352 chr3L 15466020 15466138 chr3L 15466122 15466254 9 108 0.0 0.0 0.0 9.0 234 chr3L 15466020 intergenic not near genes chr3L 15466137 intergenic not near genes chr3L 15466254 intergenic not near genes chr3L_9_15465001 chr3L_15465001 RAL-21 1353 chr3L 15474668 15474689 chr3L 15474827 15474848 9 159 1.0 4.5 2.8 2.4 180 chr3L 15474668 intergenic not near genes chr3L 15474758 intergenic not near genes chr3L 15474848 intergenic not near genes chr3L_9_15470001 chr3L_15470001 RAL-21 1354 chr3L 15482321 15482345 chr3L 15482421 15482467 12 120 3.0 3.0 3.0 3.0 146 chr3L 15482321 intergenic not near genes chr3L 15482394 intergenic not near genes chr3L 15482467 intergenic not near genes chr3L_12_15480001 chr3L_15480001 RAL-21 1355 chr3L 15541601 15541650 chr3L 15541712 15541760 9 111 3.0 3.0 3.0 2.2 159 chr3L 15541601 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541760 intron CrebA + chr3L_9_15540001 chr3L_15540001 RAL-21 1356 chr3L 15541939 15541976 chr3L 15542053 15542084 9 113 2.5 5.0 3.8 1.9 145 chr3L 15541939 intron CrebA + chr3L 15542012 intron CrebA + chr3L 15542084 intron CrebA + chr3L_9_15540001 chr3L_15540001 RAL-21 1357 chr3L 15542331 15542357 chr3L 15542426 15542483 8 121 5.5 4.0 4.8 1.4 152 chr3L 15542331 intron CrebA + chr3L 15542407 intron CrebA + chr3L 15542483 intron CrebA + chr3L_8_15540001 chr3L_15540001 RAL-21 1358 chr3L 15641779 15641813 chr3L 15641884 15641917 6 105 0.0 2.5 1.2 2.7 138 chr3L 15641779 intron comm3 - chr3L 15641848 intron comm3 - chr3L 15641917 intron comm3 - chr3L_6_15640001 chr3L_15640001 RAL-21 1359 chr3L 15791891 15791921 chr3L 15792204 15792218 6 309 2.5 5.5 4.0 1.2 327 chr3L 15791891 intergenic not near genes chr3L 15792054 intergenic not near genes chr3L 15792218 intergenic not near genes chr3L_6_15790001 chr3L_15790001 RAL-21 1360 chr3L 15816616 15816665 chr3L 15816733 15816782 15 116 5.5 3.0 4.2 2.9 166 chr3L 15816616 intergenic fwe -,CkIIalpha-i1 + chr3L 15816699 intergenic CkIIalpha-i1 +,fwe - chr3L 15816782 intergenic CkIIalpha-i1 +,fwe - chr3L_15_15815001 chr3L_15815001 RAL-21 1361 chr3L 15871578 15871611 chr3L 15871682 15871715 10 104 2.0 0.5 1.2 4.5 137 chr3L 15871578 intron pHCl - chr3L 15871646 intron pHCl - chr3L 15871715 intron pHCl - chr3L_10_15870001 chr3L_15870001 RAL-21 1362 chr3L 15981661 15981668 chr3L 15981767 15981774 4 106 9.5 6.5 8.0 0.4 113 chr3L 15981661 intron,3` UTR brm -,CG17027 + chr3L 15981718 intron,3` UTR brm -,CG17027 + chr3L 15981774 intron,3` UTR brm -,CG17027 + chr3L_4_15980001 chr3L_15980001 RAL-21 1363 chr3L 16040382 16040412 chr3L 16040488 16040526 7 111 4.0 6.0 5.0 1.2 144 chr3L 16040382 intron th - chr3L 16040454 intron th - chr3L 16040526 intron th - chr3L_7_16040001 chr3L_16040001 RAL-21 1364 chr3L 16180348 16180362 chr3L 16180466 16180483 4 120 6.0 4.5 5.2 0.6 135 chr3L 16180348 intergenic not near genes chr3L 16180416 intergenic not near genes chr3L 16180483 intergenic not near genes chr3L_4_16180001 chr3L_16180001 RAL-21 1365 chr3L 16182321 16182338 chr3L 16182547 16182564 7 225 4.5 9.5 7.0 0.9 243 chr3L 16182321 intergenic not near genes chr3L 16182442 intergenic not near genes chr3L 16182564 intergenic not near genes chr3L_7_16180001 chr3L_16180001 RAL-21 1366 chr3L 16184090 16184102 chr3L 16188929 16188941 X-element 6 4839 9.0 3.5 6.2 0.8 4851 chr3L 16184090 intergenic not near genes chr3L 16186516 intergenic not near genes chr3L 16188941 intergenic not near genes chr3L_6_16185001 chr3L_16185001 RAL-21 1367 chr3L 16221252 16221293 chr3L 16221363 16221404 8 110 0.5 2.5 1.5 3.2 152 chr3L 16221252 intergenic not near genes chr3L 16221328 intergenic not near genes chr3L 16221404 intergenic not near genes chr3L_8_16220001 chr3L_16220001 RAL-21 1368 chr3L 16322806 16322856 chr3L 16322916 16322950 15 105 3.5 4.0 3.8 3.1 144 chr3L 16322806 intergenic not near genes chr3L 16322878 intergenic not near genes chr3L 16322950 intergenic not near genes chr3L_15_16320001 chr3L_16320001 RAL-21 1369 chr3L 16340250 16340289 chr3L 16340394 16340402 8 139 2.0 2.0 2.0 2.7 152 chr3L 16340250 intron CG4998 + chr3L 16340326 intron CG4998 + chr3L 16340402 intron CG4998 + chr3L_8_16340001 chr3L_16340001 RAL-21 1370 chr3L 16443834 16443864 chr3L 16446194 16446224 Doc 6 2356 3.5 3.0 3.2 1.4 2390 chr3L 16443834 intron,intron CG33158 +,dsx-c73A - chr3L 16445029 intron,intron CG33158 +,dsx-c73A - chr3L 16446224 intron,intron CG33158 +,dsx-c73A - chr3L_6_16445001 chr3L_16445001 RAL-21 1371 chr3L 16450000 16450050 chr3L 16450105 16450155 5 105 0.0 2.0 1.0 2.5 155 chr3L 16450000 intron,intron CG33158 +,dsx-c73A - chr3L 16450078 intron,intron CG33158 +,dsx-c73A - chr3L 16450155 intron,exon CG33158 +,dsx-c73A - chr3L_5_16450001 chr3L_16450001 RAL-21 1372 chr3L 16493977 16494012 chr3L 16494514 16494542 jockey 12 533 3.5 10.5 7.0 1.5 565 chr3L 16493977 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494260 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494542 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_12_16490001 chr3L_16490001 RAL-21 1373 chr3L 16533543 16533587 chr3L 16533674 16533709 9 127 2.5 1.5 2.0 3.0 166 chr3L 16533543 intron CG43373 - chr3L 16533626 intron CG43373 - chr3L 16533709 intron CG43373 - chr3L_9_16530001 chr3L_16530001 RAL-21 1374 chr3L 16537829 16537881 chr3L 16537936 16537986 13 107 2.5 3.0 2.8 3.4 157 chr3L 16537829 intron CG43373 - chr3L 16537908 intron CG43373 - chr3L 16537986 intron CG43373 - chr3L_13_16535001 chr3L_16535001 RAL-21 1375 chr3L 16540038 16540084 chr3L 16540146 16540189 13 108 6.5 3.5 5.0 2.2 151 chr3L 16540038 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540189 intron CG43373 - chr3L_13_16540001 chr3L_16540001 RAL-21 1376 chr3L 16571554 16571586 chr3L 16571655 16571683 14 100 4.5 2.5 3.5 3.1 129 chr3L 16571554 intron Mipp1 - chr3L 16571618 intron Mipp1 - chr3L 16571683 intron Mipp1 - chr3L_14_16570001 chr3L_16570001 RAL-21 1377 chr3L 16581748 16581793 chr3L 16582132 16582177 9 380 2.5 3.0 2.8 2.4 429 chr3L 16581748 5` UTR CR43727 + chr3L 16581962 5` UTR CR43727 + chr3L 16582177 5` UTR CR43727 + chr3L_9_16580001 chr3L_16580001 RAL-21 1378 chr3L 16616494 16616509 chr3L 16621842 16621855 297 6 5346 8.5 3.5 6.0 0.9 5361 chr3L 16616494 3` UTR Abl - chr3L 16619174 3` UTR Abl - chr3L 16621855 3` UTR Abl - chr3L_6_16615001 chr3L_16615001 RAL-21 1379 chr3L 16616519 16616529 chr3L 16621836 16621868 297 6 5338 4.5 3.0 3.8 1.2 5349 chr3L 16616519 3` UTR Abl - chr3L 16619194 3` UTR Abl - chr3L 16621868 3` UTR Abl - chr3L_6_16615001 chr3L_16615001 RAL-21 1380 chr3L 16632228 16632259 chr3L 16632417 16632429 5 186 3.0 0.0 1.5 2.0 201 chr3L 16632228 intron Abl - chr3L 16632328 intron Abl - chr3L 16632429 intron Abl - chr3L_5_16630001 chr3L_16630001 RAL-21 1381 chr3L 16652666 16652710 chr3L 16652765 16652809 12 96 4.5 6.5 5.5 1.8 143 chr3L 16652666 intron Baldspot - chr3L 16652738 intron Baldspot - chr3L 16652809 intron Baldspot - chr3L_12_16650001 chr3L_16650001 RAL-21 1382 chr3L 16684015 16684035 chr3L 16689256 16689276 copia 5 5241 3.0 5.0 4.0 1.0 5261 chr3L 16684015 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689276 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_5_16685001 chr3L_16685001 RAL-21 1383 chr3L 16714823 16714872 chr3L 16714927 16714972 11 103 0.0 5.0 2.5 3.1 149 chr3L 16714823 intron Dab + chr3L 16714898 intron Dab + chr3L 16714972 intron Dab + chr3L_11_16710001 chr3L_16710001 RAL-21 1384 chr3L 16735867 16735884 chr3L 16735990 16736007 5 121 3.0 6.5 4.8 0.9 140 chr3L 16735867 intron CG9701 + chr3L 16735937 intron CG9701 + chr3L 16736007 intron CG9701 + chr3L_5_16735001 chr3L_16735001 RAL-21 1385 chr3L 16836296 16836345 chr3L 16836408 16836457 8 111 4.0 0.0 2.0 2.7 161 chr3L 16836296 intergenic not near genes chr3L 16836376 intergenic not near genes chr3L 16836457 intergenic not near genes chr3L_8_16835001 chr3L_16835001 RAL-21 1386 chr3L 16845006 16845043 chr3L 16845139 16845176 6 133 1.5 5.0 3.2 1.4 170 chr3L 16845006 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845091 intergenic CG9669 -,CG9715 + chr3L 16845176 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-21 1387 chr3L 16869559 16869607 chr3L 16869662 16869685 11 99 4.0 6.0 5.0 1.8 126 chr3L 16869559 intron Lmpt + chr3L 16869622 intron Lmpt + chr3L 16869685 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-21 1388 chr3L 16887611 16887664 chr3L 16887707 16887761 15 96 3.0 3.5 3.2 3.6 150 chr3L 16887611 intron Lmpt + chr3L 16887686 intron Lmpt + chr3L 16887761 intron Lmpt + chr3L_15_16885001 chr3L_16885001 RAL-21 1389 chr3L 16888792 16888827 chr3L 16889102 16889137 10 308 4.5 3.5 4.0 2.0 345 chr3L 16888792 intron Lmpt + chr3L 16888964 intron Lmpt + chr3L 16889137 intron Lmpt + chr3L_10_16885001 chr3L_16885001 RAL-21 1390 chr3L 16941384 16941401 chr3L 16941505 16941522 4 121 4.0 0.0 2.0 1.3 138 chr3L 16941384 intron Cpr73D - chr3L 16941453 intron Cpr73D - chr3L 16941522 intron Cpr73D - chr3L_4_16940001 chr3L_16940001 RAL-21 1391 chr3L 16945737 16945760 chr3L 16954890 16954896 roo 7 9147 1.5 2.0 1.8 2.5 9159 chr3L 16945737 exon Obp73a + chr3L 16950316 intergenic not near genes chr3L 16954896 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-21 1392 chr3L 17024037 17024084 chr3L 17024138 17024185 7 101 5.0 3.5 4.2 1.3 148 chr3L 17024037 intergenic Fit2 +,a10 - chr3L 17024111 intergenic Fit2 +,a10 - chr3L 17024185 intergenic Fit2 +,a10 - chr3L_7_17020001 chr3L_17020001 RAL-21 1393 chr3L 17034925 17034933 chr3L 17035133 17035141 G2 6 208 4.5 6.0 5.2 1.0 216 chr3L 17034925 intergenic not near genes chr3L 17035033 intergenic not near genes chr3L 17035141 intergenic not near genes chr3L_6_17035001 chr3L_17035001 RAL-21 1394 chr3L 17034937 17034965 chr3L 17035130 17035173 G2 13 207 2.5 6.0 4.2 2.5 236 chr3L 17034937 intergenic not near genes chr3L 17035055 intergenic not near genes chr3L 17035173 intergenic beg + chr3L_13_17035001 chr3L_17035001 RAL-21 1395 chr3L 17084986 17085008 chr3L 17094155 17094177 roo 7 9169 6.5 7.0 6.8 0.9 9191 chr3L 17084986 intron Rbp6 - chr3L 17089582 intron Rbp6 - chr3L 17094177 intron Rbp6 - chr3L_7_17085001 chr3L_17085001 RAL-21 1396 chr3L 17085014 17085036 chr3L 17094152 17094205 roo 9 9164 3.5 6.5 5.0 1.5 9191 chr3L 17085014 intron Rbp6 - chr3L 17089610 intron Rbp6 - chr3L 17094205 intron Rbp6 - chr3L_9_17085001 chr3L_17085001 RAL-21 1397 chr3L 17142720 17142752 chr3L 17142960 17143000 7 247 5.5 1.5 3.5 1.6 280 chr3L 17142720 intron Rbp6 - chr3L 17142860 intron Rbp6 - chr3L 17143000 intron Rbp6 - chr3L_7_17140001 chr3L_17140001 RAL-21 1398 chr3L 17146938 17146983 chr3L 17147040 17147085 8 101 4.0 3.0 3.5 1.8 147 chr3L 17146938 intron Rbp6 - chr3L 17147012 intron Rbp6 - chr3L 17147085 intron Rbp6 - chr3L_8_17145001 chr3L_17145001 RAL-21 1399 chr3L 17149147 17149185 chr3L 17149248 17149255 12 97 1.0 0.0 0.5 8.0 108 chr3L 17149147 intron Rbp6 - chr3L 17149201 intron Rbp6 - chr3L 17149255 intron Rbp6 - chr3L_12_17145001 chr3L_17145001 RAL-21 1400 chr3L 17202448 17202493 chr3L 17202630 17202669 11 180 2.5 2.0 2.2 3.4 221 chr3L 17202448 intron Rbp6 - chr3L 17202558 intron Rbp6 - chr3L 17202669 intron Rbp6 - chr3L_11_17200001 chr3L_17200001 RAL-21 1401 chr3L 17408892 17408926 chr3L 17408988 17409022 11 95 4.5 4.5 4.5 2.0 130 chr3L 17408892 intron blot - chr3L 17408957 intron blot - chr3L 17409022 intron blot - chr3L_11_17405001 chr3L_17405001 RAL-21 1402 chr3L 17516968 17517011 chr3L 17524537 17524576 412 4 7569 6.0 1.5 3.8 0.8 7608 chr3L 17516968 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524576 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-21 1403 chr3L 17580572 17580600 chr3L 17580768 17580795 7 196 5.0 0.5 2.8 1.8 223 chr3L 17580572 intron Eip74EF - chr3L 17580684 intron Eip74EF - chr3L 17580795 intron Eip74EF - chr3L_7_17580001 chr3L_17580001 RAL-21 1404 chr3L 17592767 17592818 chr3L 17592878 17592929 17 110 4.0 1.5 2.8 4.5 162 chr3L 17592767 intron Eip74EF - chr3L 17592848 intron Eip74EF - chr3L 17592929 intron Eip74EF - chr3L_17_17590001 chr3L_17590001 RAL-21 1405 chr3L 17605385 17605428 chr3L 17605537 17605579 14 156 4.5 3.5 4.0 2.8 194 chr3L 17605385 intron Eip74EF - chr3L 17605482 intron Eip74EF - chr3L 17605579 intron Eip74EF - chr3L_14_17605001 chr3L_17605001 RAL-21 1406 chr3L 17645283 17645324 chr3L 17645380 17645421 10 96 6.5 4.0 5.2 1.6 138 chr3L 17645283 intergenic CG43085 -,Pep - chr3L 17645352 intergenic CG43085 -,Pep - chr3L 17645421 intergenic CG43085 -,Pep - chr3L_10_17645001 chr3L_17645001 RAL-21 1407 chr3L 17678888 17678899 chr3L 17678992 17679002 6 103 6.0 0.5 3.2 1.4 114 chr3L 17678888 intron CG34251 + chr3L 17678945 intron CG34251 + chr3L 17679002 intron CG34251 + chr3L_6_17675001 chr3L_17675001 RAL-21 1408 chr3L 17730833 17730877 chr3L 17738183 17738227 mdg1 11 7349 4.0 2.5 3.2 2.6 7394 chr3L 17730833 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738227 intron Ccn + chr3L_11_17730001 chr3L_17730001 RAL-21 1409 chr3L 17789834 17789876 chr3L 17789930 17789971 13 96 3.0 6.0 4.5 2.4 137 chr3L 17789834 intergenic not near genes chr3L 17789902 intergenic not near genes chr3L 17789971 intergenic not near genes chr3L_13_17785001 chr3L_17785001 RAL-21 1410 chr3L 17790599 17790629 chr3L 17790884 17790913 8 283 3.0 4.0 3.5 1.8 314 chr3L 17790599 intergenic CG42815 - chr3L 17790756 intergenic CG42815 - chr3L 17790913 intergenic CG42815 - chr3L_8_17790001 chr3L_17790001 RAL-21 1411 chr3L 17799790 17799840 chr3L 17801597 17801647 S-element 18 1806 5.0 3.0 4.0 3.6 1857 chr3L 17799790 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801647 intron NUCB1 - chr3L_18_17800001 chr3L_17800001 RAL-21 1412 chr3L 17884672 17884709 chr3L 17884792 17884829 12 120 3.0 3.5 3.2 2.9 157 chr3L 17884672 intergenic CG5506 - chr3L 17884750 intergenic CG5506 - chr3L 17884829 intergenic CG5506 - chr3L_12_17880001 chr3L_17880001 RAL-21 1413 chr3L 17887863 17887878 chr3L 17887968 17887983 7 105 5.0 10.0 7.5 0.8 120 chr3L 17887863 intron CG7402 + chr3L 17887923 intron CG7402 + chr3L 17887983 intron CG7402 + chr3L_7_17885001 chr3L_17885001 RAL-21 1414 chr3L 17918372 17918404 chr3L 17921189 17921227 opus 5 2822 1.0 3.5 2.2 1.6 2855 chr3L 17918372 intergenic not near genes chr3L 17919800 intergenic not near genes chr3L 17921227 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-21 1415 chr3L 17991560 17991584 chr3L 17991658 17991682 7 98 4.0 6.0 5.0 1.2 122 chr3L 17991560 intron Eip75B - chr3L 17991621 intron Eip75B - chr3L 17991682 intron Eip75B - chr3L_7_17990001 chr3L_17990001 RAL-21 1416 chr3L 18029938 18029969 chr3L 18030035 18030061 5 96 8.5 0.0 4.2 1.0 123 chr3L 18029938 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030061 intron Eip75B - chr3L_5_18030001 chr3L_18030001 RAL-21 1417 chr3L 18047703 18047719 chr3L 18056780 18056786 roo 4 9074 3.5 5.5 4.5 0.7 9083 chr3L 18047703 intron Eip75B - chr3L 18052244 intron Eip75B - chr3L 18056786 intron Eip75B - chr3L_4_18050001 chr3L_18050001 RAL-21 1418 chr3L 18047726 18047731 chr3L 18056772 18056807 roo 4 9069 2.5 4.0 3.2 1.0 9081 chr3L 18047726 intron Eip75B - chr3L 18052266 intron Eip75B - chr3L 18056807 intron Eip75B - chr3L_4_18050001 chr3L_18050001 RAL-21 1419 chr3L 18064062 18064073 chr3L 18064169 18064179 5 106 0.0 6.0 3.0 1.2 117 chr3L 18064062 intron Eip75B - chr3L 18064120 intron Eip75B - chr3L 18064179 intron Eip75B - chr3L_5_18060001 chr3L_18060001 RAL-21 1420 chr3L 18106233 18106268 chr3L 18106372 18106407 10 138 4.5 0.0 2.2 3.1 174 chr3L 18106233 intergenic CG13698 -,mRpS26 + chr3L 18106320 intergenic CG13698 -,mRpS26 + chr3L 18106407 intergenic mRpS26 +,CG13698 - chr3L_10_18105001 chr3L_18105001 RAL-21 1421 chr3L 18107607 18107648 chr3L 18107712 18107761 14 112 3.5 6.0 4.8 2.4 154 chr3L 18107607 intergenic mRpS26 +,CG5147 - chr3L 18107684 intergenic CG5147 -,mRpS26 + chr3L 18107761 intergenic CG5147 -,mRpS26 + chr3L_14_18105001 chr3L_18105001 RAL-21 1422 chr3L 18119617 18119677 chr3L 18119749 18119795 10 118 0.0 1.5 0.8 5.6 178 chr3L 18119617 intron CG7341 + chr3L 18119706 intron CG7341 + chr3L 18119795 5` UTR CG7341 + chr3L_10_18115001 chr3L_18115001 RAL-21 1423 chr3L 18133010 18133047 chr3L 18133109 18133157 12 106 4.5 0.0 2.2 3.8 147 chr3L 18133010 intergenic Cyp312a1 - chr3L 18133084 intergenic Cyp312a1 - chr3L 18133157 intergenic Cyp312a1 - chr3L_12_18130001 chr3L_18130001 RAL-21 1424 chr3L 18150298 18150343 chr3L 18150415 18150460 17 116 3.0 4.0 3.5 3.8 162 chr3L 18150298 intron CG7330 + chr3L 18150379 intron CG7330 + chr3L 18150460 intron CG7330 + chr3L_17_18150001 chr3L_18150001 RAL-21 1425 chr3L 18152713 18152755 chr3L 18152844 18152885 7 131 0.0 4.5 2.2 2.2 172 chr3L 18152713 intron CG7330 + chr3L 18152799 intron CG7330 + chr3L 18152885 intron CG7330 + chr3L_7_18150001 chr3L_18150001 RAL-21 1426 chr3L 18160656 18160666 chr3L 18160758 18160768 5 102 6.5 6.0 6.2 0.7 112 chr3L 18160656 intron CG13699 - chr3L 18160712 intron CG13699 - chr3L 18160768 intron CG13699 - chr3L_5_18160001 chr3L_18160001 RAL-21 1427 chr3L 18172669 18172702 chr3L 18172765 18172798 14 96 4.0 1.5 2.8 3.7 129 chr3L 18172669 intron W - chr3L 18172734 intron W - chr3L 18172798 intron W - chr3L_14_18170001 chr3L_18170001 RAL-21 1428 chr3L 18175806 18175838 chr3L 18176065 18176096 11 259 3.0 6.0 4.5 2.0 290 chr3L 18175806 intron W - chr3L 18175951 intron W - chr3L 18176096 intron W - chr3L_11_18175001 chr3L_18175001 RAL-21 1429 chr3L 18203584 18203630 chr3L 18203699 18203733 5 108 6.5 0.0 3.2 1.2 149 chr3L 18203584 3` UTR CG7320 + chr3L 18203658 intergenic CG7320 + chr3L 18203733 intergenic CG7320 + chr3L_5_18200001 chr3L_18200001 RAL-21 1430 chr3L 18223146 18223183 chr3L 18223249 18223298 5 108 3.5 0.0 1.8 1.8 152 chr3L 18223146 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223298 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-21 1431 chr3L 18248934 18248985 chr3L 18249052 18249098 11 116 3.0 1.5 2.2 3.4 164 chr3L 18248934 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249098 intergenic not near genes chr3L_11_18245001 chr3L_18245001 RAL-21 1432 chr3L 18262457 18262485 chr3L 18262560 18262588 12 102 6.0 5.0 5.5 1.8 131 chr3L 18262457 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262588 intergenic not near genes chr3L_12_18260001 chr3L_18260001 RAL-21 1433 chr3L 18301336 18301360 chr3L 18301445 18301447 4 104 1.0 2.0 1.5 1.6 111 chr3L 18301336 intergenic CG13700 - chr3L 18301392 intergenic CG13700 - chr3L 18301447 intergenic CG13700 - chr3L_4_18300001 chr3L_18300001 RAL-21 1434 chr3L 18343533 18343539 chr3L 18343661 18343667 4 128 3.0 2.5 2.8 1.1 134 chr3L 18343533 intergenic not near genes chr3L 18343600 intergenic not near genes chr3L 18343667 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-21 1435 chr3L 18406113 18406153 chr3L 18406209 18406246 7 95 2.5 1.5 2.0 2.3 133 chr3L 18406113 intergenic not near genes chr3L 18406180 intergenic not near genes chr3L 18406246 intergenic not near genes chr3L_7_18405001 chr3L_18405001 RAL-21 1436 chr3L 18408721 18408754 chr3L 18408819 18408860 10 105 3.5 2.5 3.0 2.5 139 chr3L 18408721 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408860 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-21 1437 chr3L 9013689 9013691 chr3L 18417066 18417066 4 9403376 8.5 9.5 9.0 0.4 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-21 1438 chr3L 18435474 18435514 chr3L 18435580 18435620 13 106 4.0 2.5 3.2 3.1 146 chr3L 18435474 intergenic not near genes chr3L 18435547 intergenic not near genes chr3L 18435620 intergenic not near genes chr3L_13_18435001 chr3L_18435001 RAL-21 1439 chr3L 18436046 18436093 chr3L 18436161 18436211 5 117 3.0 4.0 3.5 1.1 165 chr3L 18436046 intergenic not near genes chr3L 18436128 intergenic not near genes chr3L 18436211 intergenic not near genes chr3L_5_18435001 chr3L_18435001 RAL-21 1440 chr3L 18448599 18448621 chr3L 18448711 18448733 6 112 7.5 4.0 5.8 0.9 134 chr3L 18448599 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448733 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-21 1441 chr3L 18457378 18457388 chr3L 18457498 18457502 4 121 2.0 4.5 3.2 1.0 124 chr3L 18457378 3` UTR CR44671 - chr3L 18457440 3` UTR CR44671 - chr3L 18457502 3` UTR CR44671 - chr3L_4_18455001 chr3L_18455001 RAL-21 1442 chr3L 18506127 18506158 chr3L 18509609 18509641 F-element 9 3483 1.0 4.0 2.5 2.6 3514 chr3L 18506127 intergenic not near genes chr3L 18507884 intergenic not near genes chr3L 18509641 intergenic not near genes chr3L_9_18505001 chr3L_18505001 RAL-21 1443 chr3L 18528614 18528626 chr3L 18537795 18537806 roo 4 9181 8.0 3.0 5.5 0.6 9192 chr3L 18528614 intergenic not near genes chr3L 18533210 intergenic not near genes chr3L 18537806 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-21 1444 chr3L 18528629 18528656 chr3L 18537788 18537837 roo 7 9176 5.0 1.5 3.2 1.7 9208 chr3L 18528629 intergenic not near genes chr3L 18533233 intergenic not near genes chr3L 18537837 intergenic not near genes chr3L_7_18530001 chr3L_18530001 RAL-21 1445 chr3L 18593933 18593981 chr3L 18595933 18595984 Doc 18 2000 1.5 2.5 2.0 6.0 2051 chr3L 18593933 intergenic term - chr3L 18594958 intergenic not near genes chr3L 18595984 intergenic CR45389 + chr3L_18_18590001 chr3L_18590001 RAL-21 1446 chr3L 18606735 18606774 chr3L 18606951 18606992 10 215 3.5 6.0 4.8 1.7 257 chr3L 18606735 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606864 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606992 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L_10_18605001 chr3L_18605001 RAL-21 1447 chr3L 18638562 18638610 chr3L 18638674 18638724 13 113 4.0 5.0 4.5 2.4 162 chr3L 18638562 intron MYPT-75D + chr3L 18638643 intron MYPT-75D + chr3L 18638724 intron MYPT-75D + chr3L_13_18635001 chr3L_18635001 RAL-21 1448 chr3L 18710772 18710792 chr3L 18718742 18718762 Stalker2 7 7970 4.5 2.0 3.2 1.7 7990 chr3L 18710772 intergenic not near genes chr3L 18714767 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_7_18710001 chr3L_18710001 RAL-21 1449 chr3L 18721770 18721799 chr3L 18721867 18721910 7 104 0.5 5.0 2.8 1.8 140 chr3L 18721770 intergenic CG12477 - chr3L 18721840 intergenic CG12477 - chr3L 18721910 3` UTR CG12477 - chr3L_7_18720001 chr3L_18720001 RAL-21 1450 chr3L 18753527 18753557 chr3L 18753629 18753659 8 102 2.0 2.0 2.0 2.7 132 chr3L 18753527 intron ftz-f1 - chr3L 18753593 intron ftz-f1 - chr3L 18753659 intron ftz-f1 - chr3L_8_18750001 chr3L_18750001 RAL-21 1451 chr3L 18772394 18772434 chr3L 18781095 18781127 roo 13 8700 4.5 6.5 5.5 2.0 8733 chr3L 18772394 intron ftz-f1 - chr3L 18776760 intron ftz-f1 - chr3L 18781127 intron ftz-f1 - chr3L_13_18775001 chr3L_18775001 RAL-21 1452 chr3L 18833766 18833810 chr3L 18834950 18834983 1360 6 1182 5.5 5.0 5.2 1.0 1217 chr3L 18833766 intron Indy - chr3L 18834374 intron Indy - chr3L 18834983 intron Indy - chr3L_6_18830001 chr3L_18830001 RAL-21 1453 chr3L 18861745 18861784 chr3L 18861858 18861875 9 107 5.0 2.5 3.8 1.9 130 chr3L 18861745 intergenic not near genes chr3L 18861810 intergenic not near genes chr3L 18861875 intergenic not near genes chr3L_9_18860001 chr3L_18860001 RAL-21 1454 chr3L 18885997 18886015 chr3L 18886093 18886111 10 94 0.5 6.5 3.5 2.2 114 chr3L 18885997 intron CG3961 - chr3L 18886054 intron CG3961 - chr3L 18886111 intron CG3961 - chr3L_10_18885001 chr3L_18885001 RAL-21 1455 chr3L 18888415 18888464 chr3L 18888517 18888566 18 100 1.0 6.0 3.5 4.0 151 chr3L 18888415 intron CG3961 - chr3L 18888490 intron CG3961 - chr3L 18888566 intron CG3961 - chr3L_18_18885001 chr3L_18885001 RAL-21 1456 chr3L 18895683 18895705 chr3L 18895791 18895813 10 108 7.5 5.0 6.2 1.4 130 chr3L 18895683 intron CG3902 - chr3L 18895748 intron CG3902 - chr3L 18895813 intron CG3902 - chr3L_10_18895001 chr3L_18895001 RAL-21 1457 chr3L 18924465 18924507 chr3L 18924561 18924590 6 89 1.5 2.5 2.0 2.0 125 chr3L 18924465 intron CG32204 - chr3L 18924528 intron CG32204 - chr3L 18924590 intron CG32204 - chr3L_6_18920001 chr3L_18920001 RAL-21 1458 chr3L 18928294 18928342 chr3L 18928401 18928440 14 99 2.0 5.0 3.5 3.1 146 chr3L 18928294 intron CG32204 - chr3L 18928367 intron CG32204 - chr3L 18928440 intron CG32204 - chr3L_14_18925001 chr3L_18925001 RAL-21 1459 chr3L 18933621 18933660 chr3L 18933735 18933773 9 113 5.5 4.0 4.8 1.6 152 chr3L 18933621 intron CG32204 - chr3L 18933697 intron CG32204 - chr3L 18933773 intron CG32204 - chr3L_9_18930001 chr3L_18930001 RAL-21 1460 chr3L 18935818 18935863 chr3L 18935927 18935972 13 109 5.5 5.5 5.5 2.0 154 chr3L 18935818 intron CG32204 - chr3L 18935895 intron CG32204 - chr3L 18935972 intron CG32204 - chr3L_13_18935001 chr3L_18935001 RAL-21 1461 chr3L 18969582 18969626 chr3L 18969692 18969742 13 111 2.5 3.5 3.0 3.2 160 chr3L 18969582 intergenic not near genes chr3L 18969662 intergenic not near genes chr3L 18969742 intergenic not near genes chr3L_13_18965001 chr3L_18965001 RAL-21 1462 chr3L 19008836 19008867 chr3L 19009194 19009215 jockey 6 356 5.0 6.0 5.5 0.9 379 chr3L 19008836 intron nkd - chr3L 19009026 intron nkd - chr3L 19009215 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-21 1463 chr3L 19029460 19029478 chr3L 19029557 19029599 5 109 3.5 2.0 2.8 1.3 139 chr3L 19029460 intron nkd - chr3L 19029530 intron nkd - chr3L 19029599 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-21 1464 chr3L 19041494 19041535 chr3L 19041599 19041639 7 100 1.0 3.5 2.2 2.2 145 chr3L 19041494 intron nkd - chr3L 19041566 intron nkd - chr3L 19041639 intron nkd - chr3L_7_19040001 chr3L_19040001 RAL-21 1465 chr3L 19117032 19117074 chr3L 19124491 19124541 mdg1 11 7463 5.0 5.5 5.2 1.8 7509 chr3L 19117032 intron CG14082 - chr3L 19120786 intron CG14082 - chr3L 19124541 intron CG14082 - chr3L_11_19120001 chr3L_19120001 RAL-21 1466 chr3L 19127355 19127394 chr3L 19127445 19127478 6 88 6.0 3.0 4.5 1.1 123 chr3L 19127355 intron CG14082 - chr3L 19127416 intron CG14082 - chr3L 19127478 intron CG14082 - chr3L_6_19125001 chr3L_19125001 RAL-21 1467 chr3L 19127713 19127756 chr3L 19127820 19127863 15 107 2.0 4.0 3.0 3.8 150 chr3L 19127713 intron CG14082 - chr3L 19127788 intron CG14082 - chr3L 19127863 intron CG14082 - chr3L_15_19125001 chr3L_19125001 RAL-21 1468 chr3L 19138131 19138153 chr3L 19138233 19138267 7 109 0.0 4.5 2.2 2.2 136 chr3L 19138131 intron CG14082 - chr3L 19138199 intron CG14082 - chr3L 19138267 intron CG14082 - chr3L_7_19135001 chr3L_19135001 RAL-21 1469 chr3L 19182373 19182408 chr3L 19182473 19182509 6 96 3.5 3.5 3.5 1.3 136 chr3L 19182373 intron fz2 - chr3L 19182441 intron fz2 - chr3L 19182509 intron fz2 - chr3L_6_19180001 chr3L_19180001 RAL-21 1470 chr3L 19206782 19206826 chr3L 19206882 19206890 6 94 4.0 1.5 2.8 1.6 108 chr3L 19206782 intron fz2 - chr3L 19206836 intron fz2 - chr3L 19206890 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-21 1471 chr3L 19208043 19208086 chr3L 19209437 19209474 Doc 4 1392 4.5 1.0 2.8 1.1 1431 chr3L 19208043 intron fz2 - chr3L 19208758 intron fz2 - chr3L 19209474 intron fz2 - chr3L_4_19205001 chr3L_19205001 RAL-21 1472 chr3L 19238712 19238751 chr3L 19238837 19238878 11 126 0.5 4.5 2.5 3.1 166 chr3L 19238712 intergenic not near genes chr3L 19238795 intergenic not near genes chr3L 19238878 intergenic not near genes chr3L_11_19235001 chr3L_19235001 RAL-21 1473 chr3L 19244100 19244138 chr3L 19244198 19244236 7 89 1.5 4.0 2.8 1.8 136 chr3L 19244100 intergenic not near genes chr3L 19244168 intergenic not near genes chr3L 19244236 intergenic not near genes chr3L_7_19240001 chr3L_19240001 RAL-21 1474 chr3L 19274162 19274213 chr3L 19274261 19274310 7 96 3.5 3.0 3.2 1.7 148 chr3L 19274162 3` UTR CG14085 + chr3L 19274236 intergenic CG14085 + chr3L 19274310 intergenic CG14085 + chr3L_7_19270001 chr3L_19270001 RAL-21 1475 chr3L 19285869 19285911 chr3L 19285965 19286007 8 96 7.0 3.5 5.2 1.3 138 chr3L 19285869 intron Gbs-76A - chr3L 19285938 intron Gbs-76A - chr3L 19286007 intron Gbs-76A - chr3L_8_19285001 chr3L_19285001 RAL-21 1476 chr3L 19338351 19338387 chr3L 19338466 19338499 4 113 0.0 4.0 2.0 1.3 148 chr3L 19338351 intergenic not near genes chr3L 19338425 intergenic not near genes chr3L 19338499 intergenic not near genes chr3L_4_19335001 chr3L_19335001 RAL-21 1477 chr3L 19342743 19342777 chr3L 19342854 19342888 13 111 4.5 2.0 3.2 3.1 145 chr3L 19342743 3` UTR CG32206 - chr3L 19342816 3` UTR CG32206 - chr3L 19342888 3` UTR CG32206 - chr3L_13_19340001 chr3L_19340001 RAL-21 1478 chr3L 19369831 19369869 chr3L 19369933 19369971 12 100 2.0 2.5 2.2 3.8 140 chr3L 19369831 intron CG32206 - chr3L 19369901 intron CG32206 - chr3L 19369971 intron CG32206 - chr3L_12_19365001 chr3L_19365001 RAL-21 1479 chr3L 19430368 19430435 chr3L 19430474 19430497 12 93 1.0 3.5 2.2 3.8 129 chr3L 19430368 intergenic not near genes chr3L 19430432 intergenic not near genes chr3L 19430497 intergenic not near genes chr3L_12_19430001 chr3L_19430001 RAL-21 1480 chr3L 19439159 19439203 chr3L 19439258 19439302 8 99 4.5 4.0 4.2 1.5 143 chr3L 19439159 intergenic not near genes chr3L 19439230 intergenic not near genes chr3L 19439302 intergenic not near genes chr3L_8_19435001 chr3L_19435001 RAL-21 1481 chr3L 19582135 19582186 chr3L 19582412 19582461 6 274 3.0 1.5 2.2 1.9 326 chr3L 19582135 intron Shal - chr3L 19582298 intron Shal - chr3L 19582461 intron Shal - chr3L_6_19580001 chr3L_19580001 RAL-21 1482 chr3L 19658303 19658324 chr3L 19658402 19658424 6 98 7.0 3.0 5.0 1.0 121 chr3L 19658303 intron tey - chr3L 19658364 intron tey - chr3L 19658424 intron tey - chr3L_6_19655001 chr3L_19655001 RAL-21 1483 chr3L 19703831 19703878 chr3L 19704002 19704051 19 174 3.5 3.0 3.2 4.5 220 chr3L 19703831 intron serp - chr3L 19703941 intron serp - chr3L 19704051 intron serp - chr3L_19_19700001 chr3L_19700001 RAL-21 1484 chr3L 19820283 19820309 chr3L 19827852 19827878 412 11 7569 2.5 4.0 3.2 2.6 7595 chr3L 19820283 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827878 intron Deaf1 + chr3L_11_19820001 chr3L_19820001 RAL-21 1485 chr3L 19861808 19861843 chr3L 19863615 19863651 S-element 6 1807 2.0 3.0 2.5 1.7 1843 chr3L 19861808 5` UTR CR45433 + chr3L 19862730 intergenic not near genes chr3L 19863651 intergenic not near genes chr3L_6_19860001 chr3L_19860001 RAL-21 1486 chr3L 19961270 19961301 chr3L 19961501 19961504 4 220 2.5 2.5 2.5 1.1 234 chr3L 19961270 intron Ac76E + chr3L 19961387 intron Ac76E + chr3L 19961504 intron Ac76E + chr3L_4_19960001 chr3L_19960001 RAL-21 1487 chr3L 19962931 19962981 chr3L 19963025 19963066 11 93 0.5 1.5 1.0 5.5 135 chr3L 19962931 intron Ac76E + chr3L 19962998 intron Ac76E + chr3L 19963066 intron Ac76E + chr3L_11_19960001 chr3L_19960001 RAL-21 1488 chr3L 19981195 19981234 chr3L 19981295 19981334 16 100 2.0 4.5 3.2 3.8 139 chr3L 19981195 intergenic CG17732 + chr3L 19981264 intergenic CG17732 + chr3L 19981334 intergenic CG17732 + chr3L_16_19980001 chr3L_19980001 RAL-21 1489 chr3L 20096255 20096279 chr3L 20096383 20096407 10 126 2.0 6.0 4.0 2.0 152 chr3L 20096255 intergenic not near genes chr3L 20096331 intergenic not near genes chr3L 20096407 intergenic not near genes chr3L_10_20095001 chr3L_20095001 RAL-21 1490 chr3L 20113644 20113652 chr3L 20122921 20122929 roo 7 9277 11.0 5.0 8.0 0.8 9285 chr3L 20113644 intergenic not near genes chr3L 20118286 intergenic not near genes chr3L 20122929 intergenic not near genes chr3L_7_20115001 chr3L_20115001 RAL-21 1491 chr3L 20113653 20113691 chr3L 20122920 20122962 roo 17 9276 3.5 5.0 4.2 3.3 9309 chr3L 20113653 intergenic not near genes chr3L 20118308 intergenic not near genes chr3L 20122962 intergenic not near genes chr3L_17_20115001 chr3L_20115001 RAL-21 1492 chr3L 20143074 20143112 chr3L 20143164 20143206 14 99 4.0 4.5 4.2 2.7 132 chr3L 20143074 intergenic not near genes chr3L 20143140 intergenic not near genes chr3L 20143206 intergenic not near genes chr3L_14_20140001 chr3L_20140001 RAL-21 1493 chr3L 20148265 20148315 chr3L 20148374 20148425 6 109 1.0 1.0 1.0 3.0 160 chr3L 20148265 intergenic not near genes chr3L 20148345 intergenic not near genes chr3L 20148425 intergenic not near genes chr3L_6_20145001 chr3L_20145001 RAL-21 1494 chr3L 20156150 20156191 chr3L 20156291 20156333 10 138 3.0 3.5 3.2 2.4 183 chr3L 20156150 intron CG42674 - chr3L 20156242 intron CG42674 - chr3L 20156333 intron CG42674 - chr3L_10_20155001 chr3L_20155001 RAL-21 1495 chr3L 20218210 20218227 chr3L 20218346 20218359 5 135 0.0 6.5 3.2 1.2 149 chr3L 20218210 intergenic CG6933 - chr3L 20218284 intergenic CG6933 - chr3L 20218359 intergenic CG6933 - chr3L_5_20215001 chr3L_20215001 RAL-21 1496 chr3L 20257312 20257358 chr3L 20258452 20258498 pogo 9 1140 5.5 4.5 5.0 1.5 1186 chr3L 20257312 intron rdgC + chr3L 20257905 intron rdgC + chr3L 20258498 intron rdgC + chr3L_9_20255001 chr3L_20255001 RAL-21 1497 chr3L 20283657 20283705 chr3L 20283761 20283809 9 104 6.0 2.5 4.2 1.7 152 chr3L 20283657 intron gogo - chr3L 20283733 intron gogo - chr3L 20283809 intron gogo - chr3L_9_20280001 chr3L_20280001 RAL-21 1498 chr3L 20299573 20299581 chr3L 20306191 20306228 5 6623 13.5 18.0 15.8 0.3 6655 chr3L 20299573 exon,intron,5` UTR Pex23 -,CG6597 +,CR43872 + chr3L 20302900 intron CG6597 + chr3L 20306228 intron,5` UTR CG6597 +,CG32225 - chr3L_5_20300001 chr3L_20300001 RAL-21 1499 chr3L 20386929 20386962 chr3L 20387051 20387084 8 122 4.5 4.5 4.5 1.5 155 chr3L 20386929 intron fbl + chr3L 20387006 intron fbl + chr3L 20387084 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-21 1500 chr3L 20476734 20476782 chr3L 20484353 20484401 springer 14 7619 5.0 3.5 4.2 2.7 7667 chr3L 20476734 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484401 3` UTR ZnT77C - chr3L_14_20480001 chr3L_20480001 RAL-21 1501 chr3L 20590050 20590088 chr3L 20590606 20590616 412 8 549 1.5 1.5 1.5 3.2 566 chr3L 20590050 intergenic not near genes chr3L 20590333 intergenic not near genes chr3L 20590616 intergenic not near genes chr3L_8_20590001 chr3L_20590001 RAL-21 1502 chr3L 20739476 20739501 chr3L 20739611 20739636 6 135 3.0 2.0 2.5 1.7 160 chr3L 20739476 intron CG13252 + chr3L 20739556 intron CG13252 + chr3L 20739636 intron CG13252 + chr3L_6_20735001 chr3L_20735001 RAL-21 1503 chr3L 20819610 20819655 chr3L 20819853 20819898 9 242 4.0 5.0 4.5 1.6 288 chr3L 20819610 intron Pka-R1 + chr3L 20819754 intron Pka-R1 + chr3L 20819898 intron Pka-R1 + chr3L_9_20815001 chr3L_20815001 RAL-21 1504 chr3L 20849250 20849301 chr3L 20849349 20849400 18 98 3.5 3.0 3.2 4.3 150 chr3L 20849250 intron CG32432 - chr3L 20849325 intron CG32432 - chr3L 20849400 intron CG32432 - chr3L_18_20845001 chr3L_20845001 RAL-21 1505 chr3L 20872560 20872599 chr3L 20872694 20872729 5 133 2.5 0.5 1.5 2.0 169 chr3L 20872560 intron CG32432 - chr3L 20872644 intron CG32432 - chr3L 20872729 intron CG32432 - chr3L_5_20870001 chr3L_20870001 RAL-21 1506 chr3L 20890896 20890941 chr3L 20891021 20891066 9 120 3.5 1.0 2.2 2.8 170 chr3L 20890896 intergenic not near genes chr3L 20890981 intergenic not near genes chr3L 20891066 intergenic not near genes chr3L_9_20890001 chr3L_20890001 RAL-21 1507 chr3L 20913743 20913781 chr3L 20913831 20913875 11 93 1.5 2.5 2.0 3.7 132 chr3L 20913743 intergenic CR43930 - chr3L 20913809 intergenic CR43930 - chr3L 20913875 intergenic CR43930 - chr3L_11_20910001 chr3L_20910001 RAL-21 1508 chr3L 20917107 20917115 chr3L 20917176 20917210 4 83 3.0 4.0 3.5 0.9 103 chr3L 20917107 intergenic not near genes chr3L 20917158 intergenic not near genes chr3L 20917210 intergenic not near genes chr3L_4_20915001 chr3L_20915001 RAL-21 1509 chr3L 20931780 20931824 chr3L 20931883 20931922 18 100 7.0 2.0 4.5 3.3 142 chr3L 20931780 intron fng - chr3L 20931851 intron fng - chr3L 20931922 intron fng - chr3L_18_20930001 chr3L_20930001 RAL-21 1510 chr3L 20948661 20948698 chr3L 20948757 20948800 14 101 4.5 4.0 4.2 2.7 139 chr3L 20948661 intron fng - chr3L 20948730 intron fng - chr3L 20948800 intron fng - chr3L_14_20945001 chr3L_20945001 RAL-21 1511 chr3L 20979135 20979176 chr3L 20979537 20979578 17 401 3.0 3.0 3.0 4.2 443 chr3L 20979135 intergenic not near genes chr3L 20979356 intergenic not near genes chr3L 20979578 intergenic not near genes chr3L_17_20975001 chr3L_20975001 RAL-21 1512 chr3L 20986738 20986786 chr3L 20986836 20986876 10 95 1.5 1.5 1.5 4.0 138 chr3L 20986738 intergenic not near genes chr3L 20986807 intergenic not near genes chr3L 20986876 intergenic not near genes chr3L_10_20985001 chr3L_20985001 RAL-21 1513 chr3L 21014927 21014943 chr3L 21023417 21023433 Tirant 4 8490 2.0 2.5 2.2 1.2 8506 chr3L 21014927 intron skd - chr3L 21019180 intron skd - chr3L 21023433 intron skd - chr3L_4_21015001 chr3L_21015001 RAL-21 1514 chr3L 21110164 21110200 chr3L 21110437 21110474 12 274 7.0 3.5 5.2 1.9 310 chr3L 21110164 intron ko - chr3L 21110319 intron ko - chr3L 21110474 intron ko - chr3L_12_21110001 chr3L_21110001 RAL-21 1515 chr3L 21151863 21151888 chr3L 21156947 21156993 flea 4 5099 2.5 5.5 4.0 0.8 5130 chr3L 21151863 intron Ac78C - chr3L 21154428 intron Ac78C - chr3L 21156993 intron Ac78C - chr3L_4_21150001 chr3L_21150001 RAL-21 1516 chr3L 21158577 21158629 chr3L 21158673 21158725 12 92 4.5 1.0 2.8 3.2 148 chr3L 21158577 intron Ac78C - chr3L 21158651 intron Ac78C - chr3L 21158725 intron Ac78C - chr3L_12_21155001 chr3L_21155001 RAL-21 1517 chr3L 21172836 21172871 chr3L 21172959 21172983 4 116 6.5 4.5 5.5 0.6 147 chr3L 21172836 intergenic chb +,asparagine-synthetase + chr3L 21172910 5` UTR chb + chr3L 21172983 5` UTR chb + chr3L_4_21170001 chr3L_21170001 RAL-21 1518 chr3L 21303693 21303736 chr3L 21303800 21303837 16 106 5.0 1.5 3.2 3.8 144 chr3L 21303693 intron CG11309 - chr3L 21303765 intron CG11309 - chr3L 21303837 intron CG11309 - chr3L_16_21300001 chr3L_21300001 RAL-21 1519 chr3L 21306128 21306181 chr3L 21315307 21315344 roo 17 9177 4.5 3.0 3.8 3.5 9216 chr3L 21306128 3` UTR CG7632 + chr3L 21310736 intron Pc - chr3L 21315344 3` UTR Pc - chr3L_17_21310001 chr3L_21310001 RAL-21 1520 chr3L 21361705 21361749 chr3L 21362679 21362723 G2 18 971 3.0 6.0 4.5 3.3 1018 chr3L 21361705 intergenic CG32440 + chr3L 21362214 intergenic not near genes chr3L 21362723 intergenic not near genes chr3L_18_21360001 chr3L_21360001 RAL-21 1521 chr3L 21372699 21372748 chr3L 21379227 21379276 McClintock 13 6528 6.0 3.0 4.5 2.4 6577 chr3L 21372699 intergenic not near genes chr3L 21375988 intergenic not near genes chr3L 21379276 intergenic not near genes chr3L_13_21375001 chr3L_21375001 RAL-21 1522 chr3L 21406985 21407023 chr3L 21407084 21407122 8 93 4.0 7.5 5.8 1.2 137 chr3L 21406985 intron rgn + chr3L 21407054 intron rgn + chr3L 21407122 intron rgn + chr3L_8_21405001 chr3L_21405001 RAL-21 1523 chr3L 21414519 21414541 chr3L 21414609 21414637 6 95 6.5 2.5 4.5 1.1 118 chr3L 21414519 intron rgn + chr3L 21414578 intron rgn + chr3L 21414637 intron rgn + chr3L_6_21410001 chr3L_21410001 RAL-21 1524 chr3L 21437583 21437633 chr3L 21437710 21437736 14 125 4.5 0.5 2.5 4.0 153 chr3L 21437583 3` UTR Aef1 + chr3L 21437660 3` UTR Aef1 + chr3L 21437736 3` UTR Aef1 + chr3L_14_21435001 chr3L_21435001 RAL-21 1525 chr3L 21498830 21498868 chr3L 21500481 21500491 1360 5 1646 3.0 3.5 3.2 1.2 1661 chr3L 21498830 5` UTR,intron CR43933 +,Glg1 - chr3L 21499660 intron Glg1 - chr3L 21500491 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-21 1526 chr3L 21509632 21509686 chr3L 21509729 21509783 13 97 3.5 2.0 2.8 3.4 151 chr3L 21509632 intron M6 + chr3L 21509708 intron M6 + chr3L 21509783 intron M6 + chr3L_13_21505001 chr3L_21505001 RAL-21 1527 chr3L 21637308 21637347 chr3L 21637415 21637454 7 107 3.0 6.5 4.8 1.2 146 chr3L 21637308 exon CG32444 + chr3L 21637381 intron CG32444 + chr3L 21637454 intron CG32444 + chr3L_7_21635001 chr3L_21635001 RAL-21 1528 chr3L 21649756 21649797 chr3L 21650000 21650014 19 241 2.0 3.0 2.5 5.4 258 chr3L 21649756 intron CG43980 + chr3L 21649885 intron CG43980 + chr3L 21650014 intron CG43980 + chr3L_19_21645001 chr3L_21645001 RAL-21 1529 chr3L 21671039 21671087 chr3L 21671205 21671255 10 166 5.5 4.0 4.8 1.7 216 chr3L 21671039 intergenic not near genes chr3L 21671147 intergenic not near genes chr3L 21671255 intergenic not near genes chr3L_10_21670001 chr3L_21670001 RAL-21 1530 chr3L 21736340 21736375 chr3L 21736552 21736584 9 213 0.5 5.0 2.8 2.4 244 chr3L 21736340 intergenic CR43888 + chr3L 21736462 intergenic CR43888 + chr3L 21736584 intergenic CR43888 + chr3L_9_21735001 chr3L_21735001 RAL-21 1531 chr3L 21749297 21749319 chr3L 21754477 21754499 Doc 5 5179 3.0 3.5 3.2 1.2 5202 chr3L 21749297 intron Syn1 - chr3L 21751898 intron Syn1 - chr3L 21754499 intron Syn1 - chr3L_5_21750001 chr3L_21750001 RAL-21 1532 chr3L 21758506 21758522 chr3L 21758886 21758899 4 378 16.5 13.5 15.0 0.2 393 chr3L 21758506 intron Syn1 - chr3L 21758702 intron Syn1 - chr3L 21758899 intron Syn1 - chr3L_4_21755001 chr3L_21755001 RAL-21 1533 chr3L 21769035 21769082 chr3L 21769142 21769188 8 104 3.0 3.5 3.2 1.9 153 chr3L 21769035 intron,intron Syn1 -,CG42689 + chr3L 21769112 intron,intron Syn1 -,CG42689 + chr3L 21769188 intron,intron Syn1 -,CG42689 + chr3L_8_21765001 chr3L_21765001 RAL-21 1534 chr3L 21776688 21776864 chr3L 21776795 21776959 5 108 1.0 2.5 1.8 1.8 271 chr3L 21776688 intron,intron CG42689 +,CG42552 + chr3L 21776824 intron,intron CG42689 +,CG42552 + chr3L 21776959 exon,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-21 1535 chr3L 21836710 21836749 chr3L 21836816 21836855 14 102 6.0 3.0 4.5 2.5 145 chr3L 21836710 3` UTR P5CDh1 - chr3L 21836782 3` UTR P5CDh1 - chr3L 21836855 3` UTR P5CDh1 - chr3L_14_21835001 chr3L_21835001 RAL-21 1536 chr3L 21849479 21849531 chr3L 21849581 21849633 16 102 3.5 2.0 2.8 4.2 154 chr3L 21849479 intron mub + chr3L 21849556 intron mub + chr3L 21849633 intron mub + chr3L_16_21845001 chr3L_21845001 RAL-21 1537 chr3L 21874980 21875023 chr3L 21875157 21875200 11 177 5.5 4.5 5.0 1.8 220 chr3L 21874980 intron mub + chr3L 21875090 intron mub + chr3L 21875200 intron mub + chr3L_11_21875001 chr3L_21875001 RAL-21 1538 chr3L 21901016 21901043 chr3L 21901121 21901133 7 102 2.0 4.0 3.0 1.8 117 chr3L 21901016 intron mub + chr3L 21901074 intron mub + chr3L 21901133 intron mub + chr3L_7_21900001 chr3L_21900001 RAL-21 1539 chr3L 21952432 21952470 chr3L 21953195 21953233 transib1 8 761 3.0 2.0 2.5 2.3 801 chr3L 21952432 intergenic not near genes chr3L 21952832 intergenic not near genes chr3L 21953233 intergenic not near genes chr3L_8_21950001 chr3L_21950001 RAL-21 1540 chr3L 22016353 22016386 chr3L 22016489 22016521 8 131 6.0 2.5 4.2 1.5 168 chr3L 22016353 intergenic not near genes chr3L 22016437 intergenic not near genes chr3L 22016521 intergenic not near genes chr3L_8_22015001 chr3L_22015001 RAL-21 1541 chr3L 22033669 22033723 chr3L 22033767 22033821 12 97 3.0 3.0 3.0 3.0 152 chr3L 22033669 intergenic not near genes chr3L 22033745 intergenic not near genes chr3L 22033821 intergenic not near genes chr3L_12_22030001 chr3L_22030001 RAL-21 1542 chr3L 22046164 22046213 chr3L 22046287 22046336 13 123 2.0 6.0 4.0 2.6 172 chr3L 22046164 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046336 intron Oct-TyrR + chr3L_13_22045001 chr3L_22045001 RAL-21 1543 chr3L 22099658 22099705 chr3L 22105864 22105911 3S18 17 6202 3.0 5.5 4.2 3.3 6253 chr3L 22099658 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_17_22100001 chr3L_22100001 RAL-21 1544 chr3L 22124803 22124839 chr3L 22124896 22124942 7 102 2.5 2.5 2.5 2.0 139 chr3L 22124803 intergenic not near genes chr3L 22124872 intergenic not near genes chr3L 22124942 intergenic not near genes chr3L_7_22120001 chr3L_22120001 RAL-21 1545 chr3L 22137506 22137509 chr3L 22137603 22137606 4 96 11.5 1.5 6.5 0.5 100 chr3L 22137506 intron olf413 + chr3L 22137556 intron olf413 + chr3L 22137606 intron olf413 + chr3L_4_22135001 chr3L_22135001 RAL-21 1546 chr3L 22137514 22137550 chr3L 22137598 22137621 9 85 7.5 3.0 5.2 1.5 107 chr3L 22137514 intron olf413 + chr3L 22137568 intron olf413 + chr3L 22137621 intron olf413 + chr3L_9_22135001 chr3L_22135001 RAL-21 1547 chr3L 22166428 22166474 chr3L 22166526 22166572 13 93 2.0 1.5 1.8 4.6 144 chr3L 22166428 intron olf413 + chr3L 22166500 intron olf413 + chr3L 22166572 intron olf413 + chr3L_13_22165001 chr3L_22165001 RAL-21 1548 chr3L 22169432 22169484 chr3L 22169545 22169597 8 112 2.5 5.5 4.0 1.6 165 chr3L 22169432 intron olf413 + chr3L 22169514 intron olf413 + chr3L 22169597 intron olf413 + chr3L_8_22165001 chr3L_22165001 RAL-21 1549 chr3L 22447178 22447231 chr3L 22447289 22447342 14 108 2.5 5.0 3.8 2.9 164 chr3L 22447178 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447342 intergenic not near genes chr3L_14_22445001 chr3L_22445001 RAL-21 1550 chr3L 22543067 22543104 chr3L 22543163 22543201 12 96 5.0 3.0 4.0 2.4 134 chr3L 22543067 intergenic not near genes chr3L 22543134 intergenic not near genes chr3L 22543201 intergenic not near genes chr3L_12_22540001 chr3L_22540001 RAL-21 1551 chr3L 22554419 22554444 chr3L 22554503 22554538 11 90 3.5 1.5 2.5 3.1 119 chr3L 22554419 intergenic not near genes chr3L 22554478 intergenic not near genes chr3L 22554538 intergenic not near genes chr3L_11_22550001 chr3L_22550001 RAL-21 1552 chr3L 22555748 22555788 chr3L 22563238 22563278 blood 7 7485 5.5 1.0 3.2 1.7 7530 chr3L 22555748 intergenic not near genes chr3L 22559513 intergenic not near genes chr3L 22563278 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-21 1553 chr3L 22569559 22569604 chr3L 22569675 22569722 10 115 0.5 2.5 1.5 4.0 163 chr3L 22569559 intergenic not near genes chr3L 22569640 intergenic not near genes chr3L 22569722 intergenic not near genes chr3L_10_22565001 chr3L_22565001 RAL-21 1554 chr3L 22577616 22577642 chr3L 22582411 22582450 Doc 5 4801 0.5 2.0 1.2 2.3 4834 chr3L 22577616 intergenic not near genes chr3L 22580033 intergenic not near genes chr3L 22582450 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-21 1555 chr3L 22617178 22617223 chr3L 22624650 22624653 blood 8 7466 2.5 4.5 3.5 1.8 7475 chr3L 22617178 intron CG14459 - chr3L 22620916 intron CG14459 - chr3L 22624653 intron CG14459 - chr3L_8_22620001 chr3L_22620001 RAL-21 1556 chr3L 22732446 22732490 chr3L 22732547 22732591 14 99 3.5 3.5 3.5 3.1 145 chr3L 22732446 intron CG11367 + chr3L 22732518 intron CG11367 + chr3L 22732591 exon CG11367 + chr3L_14_22730001 chr3L_22730001 RAL-21 1557 chr3L 22756403 22756427 chr3L 22756485 22756524 6 90 3.5 4.0 3.8 1.2 121 chr3L 22756403 intron SPoCk + chr3L 22756464 intron SPoCk + chr3L 22756524 intron SPoCk + chr3L_6_22755001 chr3L_22755001 RAL-21 1558 chr3L 22761368 22761416 chr3L 22766822 22766862 Ivk 19 5453 4.0 5.5 4.8 3.3 5494 chr3L 22761368 intron SPoCk + chr3L 22764115 intron SPoCk + chr3L 22766862 intron SPoCk + chr3L_19_22760001 chr3L_22760001 RAL-21 1559 chr3L 22771616 22771662 chr3L 22771718 22771764 5 99 2.5 1.0 1.8 1.8 148 chr3L 22771616 intron SPoCk + chr3L 22771690 intron SPoCk + chr3L 22771764 intron SPoCk + chr3L_5_22770001 chr3L_22770001 RAL-21 1560 chr3L 22853677 22853719 chr3L 22853783 22853825 14 104 4.0 7.0 5.5 2.2 148 chr3L 22853677 5` UTR CR43426 + chr3L 22853751 5` UTR CR43426 + chr3L 22853825 5` UTR CR43426 + chr3L_14_22850001 chr3L_22850001 RAL-21 1561 chr3L 22865968 22866002 chr3L 22867121 22867155 Doc 14 1152 5.0 6.0 5.5 2.2 1187 chr3L 22865968 intron CG33170 + chr3L 22866562 intron CG33170 + chr3L 22867155 intron CG33170 + chr3L_14_22865001 chr3L_22865001 RAL-21 1562 chr3L 22897175 22897210 chr3L 22897278 22897309 5 100 5.0 1.5 3.2 1.2 134 chr3L 22897175 intergenic not near genes chr3L 22897242 intergenic not near genes chr3L 22897309 intergenic not near genes chr3L_5_22895001 chr3L_22895001 RAL-21 1563 chr3L 22908067 22908068 chr3L 24821491 24821496 4 1913426 15.5 8.0 11.8 0.3 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_4_23860001 chr3L_23860001 RAL-21 1564 chr3L 22935055 22935091 chr3L 22935146 22935160 5 86 4.5 5.0 4.8 0.9 105 chr3L 22935055 intergenic not near genes chr3L 22935108 intergenic not near genes chr3L 22935160 intergenic not near genes chr3L_5_22935001 chr3L_22935001 RAL-21 1565 chr3L 22989844 22989891 chr3L 22996838 22996885 297 13 6992 3.0 7.0 5.0 2.2 7041 chr3L 22989844 intergenic not near genes chr3L 22993364 intergenic not near genes chr3L 22996885 intergenic not near genes chr3L_13_22990001 chr3L_22990001 RAL-21 1566 chr3L 23042218 23042255 chr3L 23048991 23049011 gypsy6 7 6768 4.5 6.5 5.5 1.1 6793 chr3L 23042218 intergenic not near genes chr3L 23045614 intergenic not near genes chr3L 23049011 intergenic not near genes chr3L_7_23045001 chr3L_23045001 RAL-21 1567 chr3L 23088289 23088312 chr3L 23088371 23088414 7 97 3.5 3.5 3.5 1.6 125 chr3L 23088289 intergenic not near genes chr3L 23088352 intergenic not near genes chr3L 23088414 intergenic not near genes chr3L_7_23085001 chr3L_23085001 RAL-21 1568 chr3L 23126009 23126051 chr3L 23126122 23126128 8 112 3.5 4.0 3.8 1.7 119 chr3L 23126009 intergenic CG33217 + chr3L 23126068 5` UTR CG33217 + chr3L 23126128 intron CG33217 + chr3L_8_23125001 chr3L_23125001 RAL-21 1569 chr3L 23182269 23182295 chr3L 23182380 23182429 6 124 4.0 2.5 3.2 1.4 160 chr3L 23182269 intron CG34031 + chr3L 23182349 intron CG34031 + chr3L 23182429 intron CG34031 + chr3L_6_23180001 chr3L_23180001 RAL-21 1570 chr3L 23875519 23875541 chr3L 23875611 23875642 4 96 4.5 3.5 4.0 0.8 123 chr3L 23875519 intron CG40470 - chr3L 23875580 intron CG40470 - chr3L 23875642 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-21 1571 chr3L 24012391 24012421 chr3L 24020752 24020780 roo 5 8358 7.0 5.5 6.2 0.7 8389 chr3L 24012391 intergenic not near genes chr3L 24016586 intergenic not near genes chr3L 24020780 intergenic not near genes chr3L_5_24015001 chr3L_24015001 RAL-21 1572 chr3L 24168614 24168634 chr3L 24176395 24176410 ZAM 5 7778 4.0 3.0 3.5 1.1 7796 chr3L 24168614 intron Snap25 + chr3L 24172512 intron Snap25 + chr3L 24176410 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-21 1573 chr3L 24791883 24791914 chr3L 24796678 24796713 Doc 8 4795 4.0 2.5 3.2 1.9 4830 chr3L 24791883 intergenic not near genes chr3L 24794298 intergenic not near genes chr3L 24796713 intergenic not near genes chr3L_8_24790001 chr3L_24790001 RAL-21 1574 chr3L 25635709 25635732 chr3L 25635983 25636024 4 288 2.5 2.0 2.2 1.2 315 chr3L 25635709 intron CG41343 - chr3L 25635866 intron CG41343 - chr3L 25636024 intron CG41343 - chr3L_4_25635001 chr3L_25635001 RAL-21 1575 chr3L 23289000 23289012 chr3L 25843661 25843694 12 2554663 20.0 32.5 26.2 0.4 2554694 chr3L 23289000 intergenic not near genes chr3L 24566347 intergenic not near genes chr3L 25843694 intron CG40178 - chr3L_12_24565001 chr3L_24565001 RAL-21 1576 chr3L 26008747 26008758 chr3L 26008914 26008925 5 167 10.0 4.5 7.2 0.6 178 chr3L 26008747 intron CG40178 - chr3L 26008836 intron CG40178 - chr3L 26008925 intron CG40178 - chr3L_5_26005001 chr3L_26005001 RAL-21 1577 chr3L 26008763 26008794 chr3L 26008910 26008961 11 159 4.5 3.5 4.0 2.2 198 chr3L 26008763 intron CG40178 - chr3L 26008862 intron CG40178 - chr3L 26008961 intron CG40178 - chr3L_11_26005001 chr3L_26005001 RAL-21 1578 chr3L 27390439 27390710 chr3L 27390680 27390808 9 111 18.0 20.0 19.0 0.5 369 chr3L 27390439 intron Dbp80 + chr3L 27390624 intron Dbp80 + chr3L 27390808 intron Dbp80 + chr3L_9_27390001 chr3L_27390001 RAL-21 1579 chr3L 27968970 27968976 chr3L 27972344 27972366 4 3392 15.0 25.0 20.0 0.2 3396 chr3L 27968970 exon CG17514 - chr3L 27970668 exon CG17514 - chr3L 27972366 exon CG17514 - chr3L_4_27970001 chr3L_27970001 RAL-21 1580 chr3L 27967529 27967572 chr3L 27971673 27971716 8 4147 34.5 31.0 32.8 0.2 4187 chr3L 27967529 exon CG17514 - chr3L 27969622 exon CG17514 - chr3L 27971716 exon CG17514 - chr3L_8_27965001 chr3L_27965001 RAL-21 1581 chr3L 27972702 27972875 chr3L 27972814 27972963 15 102 15.5 17.0 16.2 0.9 261 chr3L 27972702 exon CG17514 - chr3L 27972832 exon CG17514 - chr3L 27972963 exon CG17514 - chr3L_15_27970001 chr3L_27970001 RAL-21 1582 chr3L 27971586 27971624 chr3L 27972896 27972959 7 1338 32.5 15.5 24.0 0.3 1373 chr3L 27971586 exon CG17514 - chr3L 27972272 exon CG17514 - chr3L 27972959 exon CG17514 - chr3L_7_27970001 chr3L_27970001 RAL-21 1583 chr3R 97106 97113 chr3R 99845 99849 5 2737 11.5 8.0 9.8 0.5 2743 chr3R 97106 intergenic not near genes chr3R 98478 intergenic not near genes chr3R 99849 intergenic not near genes chr3R_5_95001 chr3R_95001 RAL-21 1584 chr3R 2534146 2534163 chr3R 2541724 2541752 4 7580 8.0 6.5 7.2 0.5 7606 chr3R 2534146 intergenic not near genes chr3R 2537949 intergenic not near genes chr3R 2541752 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-21 1585 chr3R 4063791 4063821 chr3R 4069089 4069110 5 5295 7.5 10.0 8.8 0.5 5319 chr3R 4063791 intergenic not near genes chr3R 4066450 intergenic not near genes chr3R 4069110 intergenic not near genes chr3R_5_4065001 chr3R_4065001 RAL-21 1586 chr3R 4105037 4105057 chr3R 4110255 4110281 copia 4 5222 5.0 5.0 5.0 0.7 5244 chr3R 4105037 intergenic not near genes chr3R 4107659 intergenic not near genes chr3R 4110281 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-21 1587 chr3R 4132884 4132931 chr3R 4133058 4133105 16 173 1.5 1.0 1.2 7.3 221 chr3R 4132884 5` UTR Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133105 intron Gfat1 + chr3R_16_4130001 chr3R_4130001 RAL-21 1588 chr3R 4161560 4161570 chr3R 4161625 4161667 7 85 2.5 2.5 2.5 2.0 107 chr3R 4161560 3` UTR CG40198 - chr3R 4161614 exon CG40198 - chr3R 4161667 exon CG40198 - chr3R_7_4160001 chr3R_4160001 RAL-21 1589 chr3R 4206050 4206099 chr3R 4211645 4211694 mdg3 13 5595 4.0 4.0 4.0 2.6 5644 chr3R 4206050 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211694 intron CG14636 - chr3R_13_4205001 chr3R_4205001 RAL-21 1590 chr3R 4366746 4366787 chr3R 4375139 4375190 roo 13 8401 5.5 2.5 4.0 2.6 8444 chr3R 4366746 3` UTR CG1090 + chr3R 4370968 intergenic not near genes chr3R 4375190 5` UTR CR44922 + chr3R_13_4370001 chr3R_4370001 RAL-21 1591 chr3R 4408402 4408434 chr3R 4412716 4412758 Juan 11 4321 5.5 4.0 4.8 1.9 4356 chr3R 4408402 intron CG32944 - chr3R 4410580 intron CG32944 - chr3R 4412758 intron CG32944 - chr3R_11_4410001 chr3R_4410001 RAL-21 1592 chr3R 4557566 4557605 chr3R 4557858 4557887 4 288 1.0 2.0 1.5 1.6 321 chr3R 4557566 intron CG34357 - chr3R 4557726 intron CG34357 - chr3R 4557887 intron CG34357 - chr3R_4_4555001 chr3R_4555001 RAL-21 1593 chr3R 4609532 4609577 chr3R 4610716 4610761 1360 14 1182 1.5 5.0 3.2 3.3 1229 chr3R 4609532 intergenic not near genes chr3R 4610146 intergenic not near genes chr3R 4610761 intergenic not near genes chr3R_14_4610001 chr3R_4610001 RAL-21 1594 chr3R 4680691 4680737 chr3R 4680790 4680836 17 99 5.5 3.0 4.2 3.3 145 chr3R 4680691 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680836 5` UTR CG43427 + chr3R_17_4680001 chr3R_4680001 RAL-21 1595 chr3R 4861553 4861597 chr3R 4861654 4861661 6 80 2.0 1.5 1.8 2.1 108 chr3R 4861553 intron opa + chr3R 4861607 intron opa + chr3R 4861661 intron opa + chr3R_6_4860001 chr3R_4860001 RAL-21 1596 chr3R 4887463 4887506 chr3R 4894860 4894868 rover 4 7384 4.0 0.5 2.2 1.2 7405 chr3R 4887463 intergenic not near genes chr3R 4891166 intergenic not near genes chr3R 4894868 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-21 1597 chr3R 4896274 4896324 chr3R 4896387 4896437 11 112 4.0 2.0 3.0 2.8 163 chr3R 4896274 intergenic CR45580 + chr3R 4896356 intergenic CR45580 + chr3R 4896437 5` UTR CR45580 + chr3R_11_4895001 chr3R_4895001 RAL-21 1598 chr3R 4948361 4948387 chr3R 4949003 4949029 8 640 28.5 13.0 20.8 0.4 668 chr3R 4948361 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948695 intergenic UbcD6 - chr3R 4949029 3` UTR UbcD6 - chr3R_8_4945001 chr3R_4945001 RAL-21 1599 chr3R 4965998 4966032 chr3R 4966108 4966144 9 111 3.0 2.0 2.5 2.6 146 chr3R 4965998 intron CG1124 + chr3R 4966071 intron CG1124 + chr3R 4966144 intron CG1124 + chr3R_9_4965001 chr3R_4965001 RAL-21 1600 chr3R 5045828 5045878 chr3R 5052950 5053000 HMS-Beagle 15 7121 2.0 2.5 2.2 4.7 7172 chr3R 5045828 3` UTR CR43635 - chr3R 5049414 intergenic not near genes chr3R 5053000 intergenic CR45588 - chr3R_15_5045001 chr3R_5045001 RAL-21 1601 chr3R 5067962 5068013 chr3R 5073499 5073550 mdg3 21 5537 3.0 9.0 6.0 3.0 5588 chr3R 5067962 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073550 intergenic not near genes chr3R_21_5070001 chr3R_5070001 RAL-21 1602 chr3R 5278098 5278121 chr3R 5278168 5278222 8 92 4.0 4.0 4.0 1.6 124 chr3R 5278098 intron mtd - chr3R 5278160 intron mtd - chr3R 5278222 intron mtd - chr3R_8_5275001 chr3R_5275001 RAL-21 1603 chr3R 5306106 5306159 chr3R 5306213 5306238 9 92 2.5 1.5 2.0 3.0 132 chr3R 5306106 intron mtd - chr3R 5306172 intron mtd - chr3R 5306238 intron mtd - chr3R_9_5305001 chr3R_5305001 RAL-21 1604 chr3R 5338380 5338415 chr3R 5343577 5343612 Rt1c 13 5197 5.5 2.0 3.8 2.7 5232 chr3R 5338380 intron mtd - chr3R 5340996 intron mtd - chr3R 5343612 intron mtd - chr3R_13_5340001 chr3R_5340001 RAL-21 1605 chr3R 5385953 5386005 chr3R 5386144 5386175 14 185 2.5 2.5 2.5 4.0 222 chr3R 5385953 intron kkv - chr3R 5386064 intron kkv - chr3R 5386175 intron kkv - chr3R_14_5385001 chr3R_5385001 RAL-21 1606 chr3R 5445939 5445984 chr3R 5452419 5452464 Burdock 14 6478 5.0 3.0 4.0 2.8 6525 chr3R 5445939 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452464 intron CG14669 + chr3R_14_5445001 chr3R_5445001 RAL-21 1607 chr3R 5680764 5680813 chr3R 5680868 5680917 13 100 3.0 3.0 3.0 3.2 153 chr3R 5680764 3` UTR Rab23 - chr3R 5680840 3` UTR Rab23 - chr3R 5680917 3` UTR Rab23 - chr3R_13_5680001 chr3R_5680001 RAL-21 1608 chr3R 5688782 5688810 chr3R 5688901 5688903 5 123 0.0 3.0 1.5 2.0 121 chr3R 5688782 intron plx + chr3R 5688842 intron plx + chr3R 5688903 intron plx + chr3R_5_5685001 chr3R_5685001 RAL-21 1609 chr3R 5745997 5746044 chr3R 5746258 5746305 pogo 17 259 3.5 5.0 4.2 3.3 308 chr3R 5745997 3` UTR Madm + chr3R 5746151 3` UTR Madm + chr3R 5746305 3` UTR Madm + chr3R_17_5745001 chr3R_5745001 RAL-21 1610 chr3R 5747005 5747037 chr3R 5753204 5753248 diver 10 6209 4.5 3.0 3.8 2.1 6243 chr3R 5747005 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753248 intergenic CG2091 - chr3R_10_5750001 chr3R_5750001 RAL-21 1611 chr3R 5809126 5809138 chr3R 5809361 5809408 pogo 4 261 3.0 4.0 3.5 0.9 282 chr3R 5809126 3` UTR CG11000 + chr3R 5809267 3` UTR CG11000 + chr3R 5809408 3` UTR CG11000 + chr3R_4_5805001 chr3R_5805001 RAL-21 1612 chr3R 5822368 5822404 chr3R 5823555 5823590 1360 7 1187 7.0 4.5 5.8 1.0 1222 chr3R 5822368 3` UTR CG2023 - chr3R 5822979 3` UTR CG2023 - chr3R 5823590 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-21 1613 chr3R 5927559 5927583 chr3R 5927808 5927841 pogo 7 253 3.0 5.0 4.0 1.4 282 chr3R 5927559 intron CG34113 - chr3R 5927700 intron CG34113 - chr3R 5927841 intron CG34113 - chr3R_7_5925001 chr3R_5925001 RAL-21 1614 chr3R 5987710 5987729 chr3R 5987838 5987860 4 131 1.0 1.5 1.2 1.8 150 chr3R 5987710 intergenic not near genes chr3R 5987785 intergenic not near genes chr3R 5987860 intergenic not near genes chr3R_4_5985001 chr3R_5985001 RAL-21 1615 chr3R 6029974 6029984 chr3R 6030191 6030205 6 220 2.0 7.5 4.8 1.0 231 chr3R 6029974 intergenic not near genes chr3R 6030090 intergenic not near genes chr3R 6030205 intergenic not near genes chr3R_6_6030001 chr3R_6030001 RAL-21 1616 chr3R 6117390 6117441 chr3R 6117531 6117557 14 129 3.5 3.0 3.2 3.3 167 chr3R 6117390 intergenic not near genes chr3R 6117474 intergenic not near genes chr3R 6117557 intergenic not near genes chr3R_14_6115001 chr3R_6115001 RAL-21 1617 chr3R 6121166 6121188 chr3R 6121404 6121411 BS 7 236 0.0 6.0 3.0 1.8 245 chr3R 6121166 intergenic not near genes chr3R 6121288 intergenic not near genes chr3R 6121411 intergenic not near genes chr3R_7_6120001 chr3R_6120001 RAL-21 1618 chr3R 6158492 6158529 chr3R 6167095 6167096 Tirant 4 8594 2.5 2.0 2.2 1.2 8604 chr3R 6158492 intergenic not near genes chr3R 6162794 intergenic not near genes chr3R 6167096 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-21 1619 chr3R 6206269 6206312 chr3R 6206505 6206519 BS 9 230 3.5 4.5 4.0 1.8 250 chr3R 6206269 exon Osi24 + chr3R 6206394 intron Osi24 + chr3R 6206519 intron Osi24 + chr3R_9_6205001 chr3R_6205001 RAL-21 1620 chr3R 6241311 6241343 chr3R 6241408 6241439 8 96 5.5 3.0 4.2 1.5 128 chr3R 6241311 intergenic not near genes chr3R 6241375 intergenic not near genes chr3R 6241439 intergenic not near genes chr3R_8_6240001 chr3R_6240001 RAL-21 1621 chr3R 6334783 6334810 chr3R 6334901 6334928 5 118 0.0 4.5 2.2 1.6 145 chr3R 6334783 intergenic not near genes chr3R 6334856 intergenic not near genes chr3R 6334928 intergenic Osi19 + chr3R_5_6330001 chr3R_6330001 RAL-21 1622 chr3R 6461558 6461611 chr3R 6461659 6461711 5 100 1.5 3.0 2.2 1.6 153 chr3R 6461558 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461711 intergenic not near genes chr3R_5_6460001 chr3R_6460001 RAL-21 1623 chr3R 6510013 6510048 chr3R 6515114 6515149 jockey 9 5101 5.5 4.5 5.0 1.5 5136 chr3R 6510013 intergenic not near genes chr3R 6512581 intergenic not near genes chr3R 6515149 intergenic not near genes chr3R_9_6510001 chr3R_6510001 RAL-21 1624 chr3R 6519094 6519146 chr3R 6519222 6519277 12 127 3.0 4.0 3.5 2.7 183 chr3R 6519094 intergenic not near genes chr3R 6519186 intergenic not near genes chr3R 6519277 intergenic not near genes chr3R_12_6515001 chr3R_6515001 RAL-21 1625 chr3R 6538184 6538232 chr3R 6538302 6538350 5 118 0.0 1.0 0.5 3.3 166 chr3R 6538184 intron dpr11 - chr3R 6538267 intron dpr11 - chr3R 6538350 exon dpr11 - chr3R_5_6535001 chr3R_6535001 RAL-21 1626 chr3R 6550302 6550345 chr3R 6550403 6550423 7 92 1.5 2.5 2.0 2.3 121 chr3R 6550302 intron dpr11 - chr3R 6550362 intron dpr11 - chr3R 6550423 intron dpr11 - chr3R_7_6550001 chr3R_6550001 RAL-21 1627 chr3R 6551100 6551114 chr3R 6551214 6551227 4 113 5.0 3.5 4.2 0.8 127 chr3R 6551100 intron dpr11 - chr3R 6551164 intron dpr11 - chr3R 6551227 intron dpr11 - chr3R_4_6550001 chr3R_6550001 RAL-21 1628 chr3R 6551117 6551135 chr3R 6551207 6551249 8 108 3.0 2.5 2.8 2.1 132 chr3R 6551117 intron dpr11 - chr3R 6551183 intron dpr11 - chr3R 6551249 intron dpr11 - chr3R_8_6550001 chr3R_6550001 RAL-21 1629 chr3R 6561936 6561982 chr3R 6562040 6562050 12 101 4.0 4.5 4.2 2.3 114 chr3R 6561936 intron dpr11 - chr3R 6561993 intron dpr11 - chr3R 6562050 intron dpr11 - chr3R_12_6560001 chr3R_6560001 RAL-21 1630 chr3R 6639895 6639931 chr3R 6639990 6639995 8 92 2.5 0.5 1.5 3.2 100 chr3R 6639895 intergenic not near genes chr3R 6639945 intergenic not near genes chr3R 6639995 intergenic not near genes chr3R_8_6635001 chr3R_6635001 RAL-21 1631 chr3R 6688025 6688048 chr3R 6688207 6688230 6 182 1.5 6.5 4.0 1.2 205 chr3R 6688025 3` UTR Ccp84Ag + chr3R 6688128 intergenic Ccp84Ag + chr3R 6688230 intergenic Ccp84Ag + chr3R_6_6685001 chr3R_6685001 RAL-21 1632 chr3R 6697984 6698032 chr3R 6698083 6698129 12 99 2.5 4.5 3.5 2.7 145 chr3R 6697984 intergenic not near genes chr3R 6698056 intergenic not near genes chr3R 6698129 intergenic not near genes chr3R_12_6695001 chr3R_6695001 RAL-21 1633 chr3R 6737496 6737524 chr3R 6739303 6739330 Doc 5 1807 1.0 7.0 4.0 1.0 1834 chr3R 6737496 intron pb - chr3R 6738413 intron pb - chr3R 6739330 intron pb - chr3R_5_6735001 chr3R_6735001 RAL-21 1634 chr3R 6743135 6743168 chr3R 6743238 6743271 6 103 5.5 2.0 3.8 1.2 136 chr3R 6743135 3` UTR zen2 - chr3R 6743203 3` UTR zen2 - chr3R 6743271 exon zen2 - chr3R_6_6740001 chr3R_6740001 RAL-21 1635 chr3R 6780453 6780480 chr3R 6780556 6780583 7 103 3.5 5.0 4.2 1.3 130 chr3R 6780453 intergenic not near genes chr3R 6780518 intergenic not near genes chr3R 6780583 intergenic not near genes chr3R_7_6780001 chr3R_6780001 RAL-21 1636 chr3R 6782435 6782468 chr3R 6782516 6782552 8 93 4.5 6.0 5.2 1.3 117 chr3R 6782435 intergenic not near genes chr3R 6782494 intergenic not near genes chr3R 6782552 intergenic not near genes chr3R_8_6780001 chr3R_6780001 RAL-21 1637 chr3R 6807242 6807282 chr3R 6807344 6807384 8 102 7.5 5.5 6.5 1.1 142 chr3R 6807242 intergenic not near genes chr3R 6807313 intergenic not near genes chr3R 6807384 intergenic not near genes chr3R_8_6805001 chr3R_6805001 RAL-21 1638 chr3R 6828007 6828039 chr3R 6828103 6828135 6 96 3.5 2.5 3.0 1.5 128 chr3R 6828007 intron Scr - chr3R 6828071 intron Scr - chr3R 6828135 intron Scr - chr3R_6_6825001 chr3R_6825001 RAL-21 1639 chr3R 6856364 6856392 chr3R 6856501 6856529 8 137 2.0 1.0 1.5 3.2 165 chr3R 6856364 intergenic not near genes chr3R 6856446 intergenic not near genes chr3R 6856529 intergenic not near genes chr3R_8_6855001 chr3R_6855001 RAL-21 1640 chr3R 6862203 6862252 chr3R 6862310 6862359 9 106 3.5 3.5 3.5 2.0 156 chr3R 6862203 intergenic not near genes chr3R 6862281 intergenic not near genes chr3R 6862359 intergenic not near genes chr3R_9_6860001 chr3R_6860001 RAL-21 1641 chr3R 6923565 6923616 chr3R 6923672 6923714 8 105 1.5 3.0 2.2 2.5 149 chr3R 6923565 intron Antp - chr3R 6923640 intron Antp - chr3R 6923714 intron Antp - chr3R_8_6920001 chr3R_6920001 RAL-21 1642 chr3R 6961178 6961203 chr3R 6961264 6961301 5 92 1.5 5.5 3.5 1.1 123 chr3R 6961178 intron Antp - chr3R 6961240 intron Antp - chr3R 6961301 intron Antp - chr3R_5_6960001 chr3R_6960001 RAL-21 1643 chr3R 7012191 7012234 chr3R 7012284 7012303 5 86 1.0 3.5 2.2 1.6 112 chr3R 7012191 intergenic not near genes chr3R 7012247 intergenic not near genes chr3R 7012303 intergenic not near genes chr3R_5_7010001 chr3R_7010001 RAL-21 1644 chr3R 7051107 7051152 chr3R 7051204 7051251 15 98 2.0 1.5 1.8 5.4 144 chr3R 7051107 intergenic not near genes chr3R 7051179 intergenic not near genes chr3R 7051251 intergenic not near genes chr3R_15_7050001 chr3R_7050001 RAL-21 1645 chr3R 7103297 7103307 chr3R 7103375 7103403 7 93 4.0 5.5 4.8 1.2 106 chr3R 7103297 intron Alh - chr3R 7103350 intron Alh - chr3R 7103403 intron Alh - chr3R_7_7100001 chr3R_7100001 RAL-21 1646 chr3R 7126487 7126533 chr3R 7126602 7126648 17 113 3.0 3.0 3.0 4.2 161 chr3R 7126487 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126568 3` UTR CG10068 - chr3R 7126648 3` UTR CG10068 - chr3R_17_7125001 chr3R_7125001 RAL-21 1647 chr3R 7173660 7173707 chr3R 7173760 7173807 17 98 7.0 5.0 6.0 2.4 147 chr3R 7173660 intron sas + chr3R 7173734 intron sas + chr3R 7173807 intron sas + chr3R_17_7170001 chr3R_7170001 RAL-21 1648 chr3R 7217446 7217487 chr3R 7217687 7217728 16 240 4.0 2.0 3.0 4.0 282 chr3R 7217446 intergenic CG14605 -,CG14606 - chr3R 7217587 intergenic CG14605 - chr3R 7217728 3` UTR CG14605 - chr3R_16_7215001 chr3R_7215001 RAL-21 1649 chr3R 7332148 7332172 chr3R 7332218 7332269 7 87 3.5 0.5 2.0 2.3 121 chr3R 7332148 intergenic CR44337 + chr3R 7332208 intergenic CR44337 + chr3R 7332269 intergenic CR44337 + chr3R_7_7330001 chr3R_7330001 RAL-21 1650 chr3R 7447972 7448011 chr3R 7448070 7448109 10 98 5.5 3.5 4.5 1.8 137 chr3R 7447972 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448109 intergenic not near genes chr3R_10_7445001 chr3R_7445001 RAL-21 1651 chr3R 7468334 7468337 chr3R 7468481 7468514 4 170 2.5 4.5 3.5 0.9 180 chr3R 7468334 3` UTR CR44934 - chr3R 7468424 3` UTR CR44934 - chr3R 7468514 3` UTR CR44934 - chr3R_4_7465001 chr3R_7465001 RAL-21 1652 chr3R 7574615 7574649 chr3R 7574704 7574751 6 95 0.5 0.0 0.2 5.0 136 chr3R 7574615 intron CG34127 - chr3R 7574683 intron CG34127 - chr3R 7574751 intron CG34127 - chr3R_6_7570001 chr3R_7570001 RAL-21 1653 chr3R 7621526 7621555 chr3R 7621632 7621665 4 106 3.5 1.0 2.2 1.2 139 chr3R 7621526 intron CG34127 - chr3R 7621596 intron CG34127 - chr3R 7621665 intron CG34127 - chr3R_4_7620001 chr3R_7620001 RAL-21 1654 chr3R 7641059 7641089 chr3R 7642643 7642663 hobo 6 1580 6.0 7.0 6.5 0.8 1604 chr3R 7641059 intergenic not near genes chr3R 7641861 intergenic not near genes chr3R 7642663 intergenic not near genes chr3R_6_7640001 chr3R_7640001 RAL-21 1655 chr3R 7688733 7688775 chr3R 7689108 7689150 9 371 2.0 1.5 1.8 3.2 417 chr3R 7688733 intron Nlg1 + chr3R 7688942 intron Nlg1 + chr3R 7689150 intron Nlg1 + chr3R_9_7685001 chr3R_7685001 RAL-21 1656 chr3R 7729446 7729491 chr3R 7737404 7737437 Stalker2 16 7956 6.0 4.5 5.2 2.6 7991 chr3R 7729446 intergenic not near genes chr3R 7733442 intergenic not near genes chr3R 7737437 intergenic not near genes chr3R_16_7730001 chr3R_7730001 RAL-21 1657 chr3R 7760238 7760284 chr3R 7760767 7760799 15 528 3.5 2.0 2.8 3.9 561 chr3R 7760238 intron Sp7 + chr3R 7760518 intron Sp7 + chr3R 7760799 5` UTR Sp7 + chr3R_15_7760001 chr3R_7760001 RAL-21 1658 chr3R 7775893 7775951 chr3R 7775994 7776050 13 99 0.0 2.0 1.0 6.5 157 chr3R 7775893 intergenic not near genes chr3R 7775972 intergenic not near genes chr3R 7776050 intergenic not near genes chr3R_13_7775001 chr3R_7775001 RAL-21 1659 chr3R 7948434 7948467 chr3R 7948524 7948564 8 95 2.5 4.5 3.5 1.8 130 chr3R 7948434 intron dsx - chr3R 7948499 intron dsx - chr3R 7948564 intron dsx - chr3R_8_7945001 chr3R_7945001 RAL-21 1660 chr3R 7955916 7955946 chr3R 7956013 7956043 8 95 4.0 2.0 3.0 2.0 127 chr3R 7955916 intron dsx - chr3R 7955980 intron dsx - chr3R 7956043 intron dsx - chr3R_8_7955001 chr3R_7955001 RAL-21 1661 chr3R 7973303 7973336 chr3R 7974385 7974418 1360 14 1081 3.5 6.0 4.8 2.4 1115 chr3R 7973303 intergenic not near genes chr3R 7973860 intergenic not near genes chr3R 7974418 3` UTR CD98hc - chr3R_14_7970001 chr3R_7970001 RAL-21 1662 chr3R 8076034 8076057 chr3R 8076214 8076258 11 195 2.0 4.0 3.0 2.8 224 chr3R 8076034 intron mAChR-B + chr3R 8076146 intron mAChR-B + chr3R 8076258 intron mAChR-B + chr3R_11_8075001 chr3R_8075001 RAL-21 1663 chr3R 8090250 8090302 chr3R 8090447 8090499 26 194 4.0 2.0 3.0 6.5 249 chr3R 8090250 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090499 intergenic CR44330 + chr3R_26_8090001 chr3R_8090001 RAL-21 1664 chr3R 8090549 8090568 chr3R 8094046 8094065 297 10 3496 4.5 4.5 4.5 1.8 3516 chr3R 8090549 intergenic CR44330 + chr3R 8092307 intergenic not near genes chr3R 8094065 intergenic CG7900 + chr3R_10_8090001 chr3R_8090001 RAL-21 1665 chr3R 8094391 8094437 chr3R 8099716 8099743 Transpac 10 5323 4.0 5.5 4.8 1.7 5352 chr3R 8094391 intron CG7900 + chr3R 8097067 intron CG7900 + chr3R 8099743 intron CG7900 + chr3R_10_8095001 chr3R_8095001 RAL-21 1666 chr3R 8101755 8101785 chr3R 8104859 8104889 G2 7 3104 1.0 3.5 2.2 2.2 3134 chr3R 8101755 exon CG7900 + chr3R 8103322 intron CG7900 + chr3R 8104889 3` UTR CG7900 + chr3R_7_8100001 chr3R_8100001 RAL-21 1667 chr3R 8107367 8107406 chr3R 8107521 8107560 13 152 5.0 5.0 5.0 2.2 193 chr3R 8107367 intron puc + chr3R 8107464 intron puc + chr3R 8107560 intron puc + chr3R_13_8105001 chr3R_8105001 RAL-21 1668 chr3R 8163857 8163891 chr3R 8163956 8163989 8 92 2.5 5.0 3.8 1.7 132 chr3R 8163857 intron grn - chr3R 8163923 intron grn - chr3R 8163989 intron grn - chr3R_8_8160001 chr3R_8160001 RAL-21 1669 chr3R 8182655 8182686 chr3R 8182747 8182785 11 100 3.0 3.0 3.0 2.8 130 chr3R 8182655 intergenic not near genes chr3R 8182720 intergenic not near genes chr3R 8182785 intergenic not near genes chr3R_11_8180001 chr3R_8180001 RAL-21 1670 chr3R 8230866 8230913 chr3R 8231350 8231377 5 480 2.5 0.5 1.5 2.0 511 chr3R 8230866 3` UTR CR45551 - chr3R 8231122 3` UTR CR45551 - chr3R 8231377 3` UTR CR45551 - chr3R_5_8230001 chr3R_8230001 RAL-21 1671 chr3R 8402985 8403036 chr3R 8412171 8412206 roo 8 9169 1.5 1.5 1.5 3.2 9221 chr3R 8402985 intron CG45263 - chr3R 8407596 intron CG45263 - chr3R 8412206 intron CG45263 - chr3R_8_8405001 chr3R_8405001 RAL-21 1672 chr3R 8431131 8431163 chr3R 8431238 8431266 8 105 4.5 2.0 3.2 1.9 135 chr3R 8431131 intron CG45263 - chr3R 8431198 intron CG45263 - chr3R 8431266 intron CG45263 - chr3R_8_8430001 chr3R_8430001 RAL-21 1673 chr3R 8468187 8468196 chr3R 8468267 8468307 5 93 2.0 2.0 2.0 1.7 120 chr3R 8468187 intron CG45263 - chr3R 8468247 intron CG45263 - chr3R 8468307 intron CG45263 - chr3R_5_8465001 chr3R_8465001 RAL-21 1674 chr3R 8478072 8478086 chr3R 8478169 8478185 5 99 6.0 4.0 5.0 0.8 113 chr3R 8478072 intergenic CG45263 - chr3R 8478128 intergenic not near genes chr3R 8478185 intergenic not near genes chr3R_5_8475001 chr3R_8475001 RAL-21 1675 chr3R 8478088 8478101 chr3R 8478167 8478199 5 95 4.0 4.0 4.0 1.0 111 chr3R 8478088 intergenic CG45263 - chr3R 8478144 intergenic not near genes chr3R 8478199 intergenic not near genes chr3R_5_8475001 chr3R_8475001 RAL-21 1676 chr3R 8541329 8541365 chr3R 8541424 8541466 8 92 2.5 1.5 2.0 2.7 137 chr3R 8541329 intergenic not near genes chr3R 8541398 intergenic not near genes chr3R 8541466 intergenic not near genes chr3R_8_8540001 chr3R_8540001 RAL-21 1677 chr3R 8570457 8570504 chr3R 8575113 8575159 HMS-Beagle 7 4652 1.5 2.0 1.8 2.5 4702 chr3R 8570457 intergenic not near genes chr3R 8572808 intergenic not near genes chr3R 8575159 intergenic not near genes chr3R_7_8570001 chr3R_8570001 RAL-21 1678 chr3R 8601752 8601789 chr3R 8610925 8610961 roo 9 9166 4.5 3.0 3.8 1.9 9209 chr3R 8601752 intron 5-HT2B + chr3R 8606356 intron 5-HT2B + chr3R 8610961 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 RAL-21 1679 chr3R 8601790 8601799 chr3R 8610921 8610972 roo 10 9159 3.5 2.5 3.0 2.5 9182 chr3R 8601790 intron 5-HT2B + chr3R 8606381 intron 5-HT2B + chr3R 8610972 intron 5-HT2B + chr3R_10_8605001 chr3R_8605001 RAL-21 1680 chr3R 8642411 8642449 chr3R 8642500 8642506 13 85 2.0 3.0 2.5 3.7 95 chr3R 8642411 intergenic not near genes chr3R 8642458 intergenic not near genes chr3R 8642506 intergenic not near genes chr3R_13_8640001 chr3R_8640001 RAL-21 1681 chr3R 8707344 8707372 chr3R 8709801 8709833 jockey 8 2459 3.0 2.0 2.5 2.3 2489 chr3R 8707344 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709833 intergenic not near genes chr3R_8_8705001 chr3R_8705001 RAL-21 1682 chr3R 8745728 8745780 chr3R 8745859 8745910 19 128 2.5 2.5 2.5 5.4 182 chr3R 8745728 intron CG9801 - chr3R 8745819 intron CG9801 - chr3R 8745910 intron CG9801 - chr3R_19_8745001 chr3R_8745001 RAL-21 1683 chr3R 8843491 8843519 chr3R 8843722 8843751 7 230 4.0 2.5 3.2 1.7 260 chr3R 8843491 intron pyd - chr3R 8843621 intron pyd - chr3R 8843751 intron pyd - chr3R_7_8840001 chr3R_8840001 RAL-21 1684 chr3R 8883316 8883333 chr3R 8883416 8883433 5 97 2.5 3.5 3.0 1.2 117 chr3R 8883316 intron pyd - chr3R 8883374 intron pyd - chr3R 8883433 intron pyd - chr3R_5_8880001 chr3R_8880001 RAL-21 1685 chr3R 8894852 8894904 chr3R 8896028 8896080 1360 13 1171 2.0 2.5 2.2 4.1 1228 chr3R 8894852 intron pyd - chr3R 8895466 intron pyd - chr3R 8896080 intron pyd - chr3R_13_8895001 chr3R_8895001 RAL-21 1686 chr3R 9082032 9082067 chr3R 9082136 9082181 7 109 1.0 2.5 1.8 2.5 149 chr3R 9082032 intron pum - chr3R 9082106 intron pum - chr3R 9082181 intron pum - chr3R_7_9080001 chr3R_9080001 RAL-21 1687 chr3R 9095269 9095315 chr3R 9095376 9095422 14 104 4.0 7.0 5.5 2.2 153 chr3R 9095269 intron pum - chr3R 9095346 intron pum - chr3R 9095422 intron pum - chr3R_14_9095001 chr3R_9095001 RAL-21 1688 chr3R 9101824 9101870 chr3R 9101942 9101955 12 114 4.0 5.5 4.8 2.1 131 chr3R 9101824 intron pum - chr3R 9101890 intron pum - chr3R 9101955 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-21 1689 chr3R 9108846 9108874 chr3R 9108942 9108970 11 96 8.0 2.0 5.0 1.8 124 chr3R 9108846 intron pum - chr3R 9108908 intron pum - chr3R 9108970 intron pum - chr3R_11_9105001 chr3R_9105001 RAL-21 1690 chr3R 9141141 9141188 chr3R 9141250 9141297 10 106 5.0 5.5 5.2 1.6 156 chr3R 9141141 intron pum - chr3R 9141219 intron pum - chr3R 9141297 intron pum - chr3R_10_9140001 chr3R_9140001 RAL-21 1691 chr3R 9278772 9278806 chr3R 9284039 9284078 Rt1a 9 5271 5.5 4.0 4.8 1.6 5306 chr3R 9278772 intergenic not near genes chr3R 9281425 intergenic not near genes chr3R 9284078 intergenic not near genes chr3R_9_9280001 chr3R_9280001 RAL-21 1692 chr3R 9314287 9314340 chr3R 9314411 9314464 9 124 4.0 1.0 2.5 2.6 177 chr3R 9314287 intron CG8861 - chr3R 9314376 intron CG8861 - chr3R 9314464 intron CG8861 - chr3R_9_9310001 chr3R_9310001 RAL-21 1693 chr3R 9319585 9319601 chr3R 9320040 9320051 jockey 9 454 2.5 7.0 4.8 1.6 466 chr3R 9319585 intron CG8861 - chr3R 9319818 intron CG8861 - chr3R 9320051 intron CG8861 - chr3R_9_9315001 chr3R_9315001 RAL-21 1694 chr3R 9361804 9361808 chr3R 9362065 9362069 pogo 4 261 10.5 6.0 8.2 0.4 265 chr3R 9361804 3` UTR CG45050 + chr3R 9361936 3` UTR CG45050 + chr3R 9362069 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-21 1695 chr3R 9361810 9361844 chr3R 9362058 9362105 pogo 9 260 3.5 5.0 4.2 1.7 295 chr3R 9361810 3` UTR CG45050 + chr3R 9361958 3` UTR CG45050 + chr3R 9362105 3` UTR CG45050 + chr3R_9_9360001 chr3R_9360001 RAL-21 1696 chr3R 9379125 9379169 chr3R 9379227 9379266 6 101 0.0 2.0 1.0 3.0 141 chr3R 9379125 intron FER - chr3R 9379196 intron FER - chr3R 9379266 intron FER - chr3R_6_9375001 chr3R_9375001 RAL-21 1697 chr3R 9382803 9382834 chr3R 9382947 9382979 8 144 3.0 2.0 2.5 2.3 176 chr3R 9382803 intron FER - chr3R 9382891 intron FER - chr3R 9382979 intron FER - chr3R_8_9380001 chr3R_9380001 RAL-21 1698 chr3R 9526578 9526620 chr3R 9526675 9526717 14 96 3.0 3.5 3.2 3.3 139 chr3R 9526578 exon CG8176 + chr3R 9526648 3` UTR CG8176 + chr3R 9526717 3` UTR CG8176 + chr3R_14_9525001 chr3R_9525001 RAL-21 1699 chr3R 9611867 9611884 chr3R 9611969 9611986 8 102 5.0 0.0 2.5 2.3 119 chr3R 9611867 intron CG8312 + chr3R 9611926 intron CG8312 + chr3R 9611986 intron CG8312 + chr3R_8_9610001 chr3R_9610001 RAL-21 1700 chr3R 9699970 9700000 chr3R 9700066 9700109 1360 9 106 3.0 4.5 3.8 1.9 139 chr3R 9699970 intron Unc-115a - chr3R 9700040 intron Unc-115a - chr3R 9700109 intron Unc-115a - chr3R_9_9700001 chr3R_9700001 RAL-21 1701 chr3R 9829387 9829425 chr3R 9829491 9829530 16 105 4.0 5.0 4.5 2.9 143 chr3R 9829387 intron Teh1 - chr3R 9829458 intron Teh1 - chr3R 9829530 intron Teh1 - chr3R_16_9825001 chr3R_9825001 RAL-21 1702 chr3R 9858667 9858686 chr3R 9858785 9858804 6 118 5.0 5.0 5.0 1.0 137 chr3R 9858667 intron Teh1 - chr3R 9858736 intron Teh1 - chr3R 9858804 intron Teh1 - chr3R_6_9855001 chr3R_9855001 RAL-21 1703 chr3R 10033872 10033888 chr3R 10033929 10033983 9 89 4.0 3.0 3.5 2.0 111 chr3R 10033872 intron Mical - chr3R 10033928 intron Mical - chr3R 10033983 intron Mical - chr3R_9_10030001 chr3R_10030001 RAL-21 1704 chr3R 10073768 10073801 chr3R 10073897 10073930 10 129 1.5 2.0 1.8 3.6 162 chr3R 10073768 intergenic nerfin-2 +,CG5361 - chr3R 10073849 3` UTR CG5361 - chr3R 10073930 exon CG5361 - chr3R_10_10070001 chr3R_10070001 RAL-21 1705 chr3R 10192275 10192304 chr3R 10192476 10192506 5 203 2.5 5.0 3.8 1.0 231 chr3R 10192275 intron Syn + chr3R 10192390 intron Syn + chr3R 10192506 intron Syn + chr3R_5_10190001 chr3R_10190001 RAL-21 1706 chr3R 10231767 10231814 chr3R 10237364 10237396 mdg3 17 5591 5.5 3.0 4.2 3.3 5629 chr3R 10231767 intron CG42795 + chr3R 10234582 intron CG42795 + chr3R 10237396 intron CG42795 + chr3R_17_10230001 chr3R_10230001 RAL-21 1707 chr3R 10255361 10255373 chr3R 10260821 10260833 I-element 8 5460 8.5 3.5 6.0 1.1 5472 chr3R 10255361 3` UTR Sirt6 - chr3R 10258097 intron Sirt6 - chr3R 10260833 exon Sirt6 - chr3R_8_10255001 chr3R_10255001 RAL-21 1708 chr3R 10275564 10275583 chr3R 10275661 10275680 11 97 6.5 8.0 7.2 1.3 116 chr3R 10275564 intron CG43143 + chr3R 10275622 intron CG43143 + chr3R 10275680 intron CG43143 + chr3R_11_10275001 chr3R_10275001 RAL-21 1709 chr3R 10593427 10593448 chr3R 10593534 10593551 6 102 3.5 3.0 3.2 1.4 124 chr3R 10593427 intron hth - chr3R 10593489 intron hth - chr3R 10593551 exon hth - chr3R_6_10590001 chr3R_10590001 RAL-21 1710 chr3R 10646085 10646135 chr3R 10646256 10646296 11 170 4.0 2.5 3.2 2.6 211 chr3R 10646085 intergenic CR44018 + chr3R 10646190 intergenic CR44018 + chr3R 10646296 intergenic not near genes chr3R_11_10645001 chr3R_10645001 RAL-21 1711 chr3R 10723743 10723777 chr3R 10723854 10723889 8 110 3.5 0.5 2.0 2.7 146 chr3R 10723743 intergenic not near genes chr3R 10723816 intergenic not near genes chr3R 10723889 intergenic not near genes chr3R_8_10720001 chr3R_10720001 RAL-21 1712 chr3R 10732303 10732344 chr3R 10733195 10733236 13 890 3.5 1.5 2.5 3.7 933 chr3R 10732303 intergenic not near genes chr3R 10732770 intergenic not near genes chr3R 10733236 intergenic not near genes chr3R_13_10730001 chr3R_10730001 RAL-21 1713 chr3R 10745411 10745453 chr3R 10745518 10745546 12 102 0.0 3.0 1.5 4.8 135 chr3R 10745411 intron TkR86C - chr3R 10745478 intron TkR86C - chr3R 10745546 intron TkR86C - chr3R_12_10745001 chr3R_10745001 RAL-21 1714 chr3R 10804163 10804208 chr3R 10811705 10811705 17.6 11 7546 2.5 4.5 3.5 2.4 7542 chr3R 10804163 intergenic CG14692 - chr3R 10807934 intergenic not near genes chr3R 10811705 3` UTR CG14693 - chr3R_11_10805001 chr3R_10805001 RAL-21 1715 chr3R 10920027 10920074 chr3R 10920125 10920172 13 97 3.0 1.5 2.2 4.1 145 chr3R 10920027 intergenic not near genes chr3R 10920100 intergenic not near genes chr3R 10920172 intergenic not near genes chr3R_13_10920001 chr3R_10920001 RAL-21 1716 chr3R 10963546 10963589 chr3R 10963660 10963703 8 110 1.0 3.0 2.0 2.7 157 chr3R 10963546 intergenic not near genes chr3R 10963624 intergenic not near genes chr3R 10963703 intergenic not near genes chr3R_8_10960001 chr3R_10960001 RAL-21 1717 chr3R 10999468 10999507 chr3R 10999636 10999656 7 163 6.5 1.5 4.0 1.4 188 chr3R 10999468 intron CG34114 + chr3R 10999562 intron CG34114 + chr3R 10999656 intron CG34114 + chr3R_7_10995001 chr3R_10995001 RAL-21 1718 chr3R 11010733 11010759 chr3R 11010848 11010864 4 112 5.0 0.0 2.5 1.1 131 chr3R 11010733 intron CG34114 + chr3R 11010798 intron CG34114 + chr3R 11010864 intron CG34114 + chr3R_4_11010001 chr3R_11010001 RAL-21 1719 chr3R 11015818 11015860 chr3R 11016327 11016375 7 502 1.0 0.5 0.8 3.9 557 chr3R 11015818 intron CG34114 + chr3R 11016096 intron CG34114 + chr3R 11016375 intron CG34114 + chr3R_7_11015001 chr3R_11015001 RAL-21 1720 chr3R 11065570 11065595 chr3R 11071244 11071269 297 4 5674 3.0 1.5 2.2 1.2 5699 chr3R 11065570 intergenic not near genes chr3R 11068420 intergenic not near genes chr3R 11071269 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-21 1721 chr3R 11085465 11085470 chr3R 11085562 11085567 4 97 3.0 3.5 3.2 1.0 102 chr3R 11085465 3` UTR CR44940 - chr3R 11085516 intergenic CR44940 - chr3R 11085567 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-21 1722 chr3R 11103151 11103164 chr3R 11103253 11103266 5 102 0.0 0.0 0.0 5.0 115 chr3R 11103151 intergenic not near genes chr3R 11103208 intergenic not near genes chr3R 11103266 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-21 1723 chr3R 11130784 11130833 chr3R 11130976 11131025 14 190 2.5 5.0 3.8 2.9 241 chr3R 11130784 intergenic not near genes chr3R 11130904 intergenic not near genes chr3R 11131025 intergenic not near genes chr3R_14_11130001 chr3R_11130001 RAL-21 1724 chr3R 11144154 11144203 chr3R 11144552 11144601 13 393 2.0 2.0 2.0 4.3 447 chr3R 11144154 intergenic CheA86a - chr3R 11144378 3` UTR CheA86a - chr3R 11144601 exon CheA86a - chr3R_13_11140001 chr3R_11140001 RAL-21 1725 chr3R 11184514 11184549 chr3R 11191241 11191280 5 6730 2.5 6.0 4.2 1.0 6766 chr3R 11184514 intergenic not near genes chr3R 11187897 intergenic not near genes chr3R 11191280 intergenic not near genes chr3R_5_11185001 chr3R_11185001 RAL-21 1726 chr3R 11247225 11247228 chr3R 11247326 11247329 INE-1 4 101 13.5 5.5 9.5 0.4 104 chr3R 11247225 intergenic CG5214 +,CR43283 - chr3R 11247277 intergenic CR43283 -,CG5214 + chr3R 11247329 intergenic CR43283 -,CG5214 + chr3R_4_11245001 chr3R_11245001 RAL-21 1727 chr3R 11294448 11294489 chr3R 11294779 11294820 7 331 4.5 2.0 3.2 1.7 372 chr3R 11294448 intron CR31386 - chr3R 11294634 intron CR31386 - chr3R 11294820 intron CR31386 - chr3R_7_11290001 chr3R_11290001 RAL-21 1728 chr3R 11342522 11342572 chr3R 11342618 11342662 10 95 3.5 5.0 4.2 1.9 140 chr3R 11342522 intron pros + chr3R 11342592 intron pros + chr3R 11342662 intron pros + chr3R_10_11340001 chr3R_11340001 RAL-21 1729 chr3R 11379233 11379258 chr3R 11388407 11388433 roo 8 9175 4.0 6.0 5.0 1.3 9200 chr3R 11379233 intron pros + chr3R 11383833 intron pros + chr3R 11388433 intron pros + chr3R_8_11380001 chr3R_11380001 RAL-21 1730 chr3R 11452091 11452104 chr3R 11452198 11452211 4 107 7.5 8.5 8.0 0.4 120 chr3R 11452091 intron CG17230 + chr3R 11452151 intron CG17230 + chr3R 11452211 intron CG17230 + chr3R_4_11450001 chr3R_11450001 RAL-21 1731 chr3R 11476931 11476966 chr3R 11477053 11477088 17 122 6.5 6.0 6.2 2.4 157 chr3R 11476931 intergenic not near genes chr3R 11477010 intergenic not near genes chr3R 11477088 intergenic not near genes chr3R_17_11475001 chr3R_11475001 RAL-21 1732 chr3R 11567768 11567816 chr3R 11567877 11567925 16 101 1.0 5.0 3.0 4.0 157 chr3R 11567768 intergenic not near genes chr3R 11567846 intergenic not near genes chr3R 11567925 intergenic not near genes chr3R_16_11565001 chr3R_11565001 RAL-21 1733 chr3R 11664774 11664822 chr3R 11664886 11664934 20 110 4.5 4.0 4.2 3.8 160 chr3R 11664774 intron CG42327 + chr3R 11664854 intron CG42327 + chr3R 11664934 intron CG42327 + chr3R_20_11660001 chr3R_11660001 RAL-21 1734 chr3R 11694706 11694740 chr3R 11694819 11694853 11 108 4.0 0.0 2.0 3.7 147 chr3R 11694706 intergenic Fer3 - chr3R 11694780 intergenic Fer3 - chr3R 11694853 intergenic not near genes chr3R_11_11690001 chr3R_11690001 RAL-21 1735 chr3R 11757722 11757755 chr3R 11757842 11757849 5 104 7.0 4.5 5.8 0.7 127 chr3R 11757722 intron Lk6 - chr3R 11757786 intron Lk6 - chr3R 11757849 intron Lk6 - chr3R_5_11755001 chr3R_11755001 RAL-21 1736 chr3R 11830337 11830356 chr3R 11830435 11830453 4 101 11.5 11.5 11.5 0.3 116 chr3R 11830337 intron CG6959 - chr3R 11830395 intron CG6959 - chr3R 11830453 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-21 1737 chr3R 11830969 11830990 chr3R 11831119 11831140 4 150 4.5 2.5 3.5 0.9 171 chr3R 11830969 intron CG6959 - chr3R 11831054 intron CG6959 - chr3R 11831140 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-21 1738 chr3R 11834168 11834200 chr3R 11834250 11834295 8 92 7.0 5.5 6.2 1.1 127 chr3R 11834168 intron CG6959 - chr3R 11834232 intron CG6959 - chr3R 11834295 intron CG6959 - chr3R_8_11830001 chr3R_11830001 RAL-21 1739 chr3R 11840036 11840058 chr3R 11840153 11840169 6 114 10.5 4.0 7.2 0.7 133 chr3R 11840036 intron CG6959 - chr3R 11840102 intron CG6959 - chr3R 11840169 intron CG6959 - chr3R_6_11840001 chr3R_11840001 RAL-21 1740 chr3R 11841078 11841092 chr3R 11846269 11846300 BS 6 5204 2.0 5.0 3.5 1.3 5222 chr3R 11841078 intron CG6959 - chr3R 11843689 intron CG6959 - chr3R 11846300 intron CG6959 - chr3R_6_11840001 chr3R_11840001 RAL-21 1741 chr3R 11853455 11853473 chr3R 11853592 11853629 4 164 6.0 4.5 5.2 0.6 174 chr3R 11853455 intron CG6959 - chr3R 11853542 intron CG6959 - chr3R 11853629 intron CG6959 - chr3R_4_11850001 chr3R_11850001 RAL-21 1742 chr3R 11919322 11919334 chr3R 11919393 11919406 5 80 5.5 2.0 3.8 1.0 84 chr3R 11919322 intron Cad87A - chr3R 11919364 intron Cad87A - chr3R 11919406 intron Cad87A - chr3R_5_11915001 chr3R_11915001 RAL-21 1743 chr3R 11945368 11945396 chr3R 11945486 11945514 8 116 4.0 4.0 4.0 1.6 146 chr3R 11945368 intron Cad87A - chr3R 11945441 intron Cad87A - chr3R 11945514 intron Cad87A - chr3R_8_11945001 chr3R_11945001 RAL-21 1744 chr3R 11957839 11957877 chr3R 11958142 11958163 S-element 5 299 6.0 4.5 5.2 0.8 324 chr3R 11957839 intergenic not near genes chr3R 11958001 intergenic not near genes chr3R 11958163 intergenic not near genes chr3R_5_11955001 chr3R_11955001 RAL-21 1745 chr3R 12022864 12022916 chr3R 12025061 12025112 pogo 26 2194 4.0 3.0 3.5 5.8 2248 chr3R 12022864 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025112 intergenic not near genes chr3R_26_12020001 chr3R_12020001 RAL-21 1746 chr3R 12080878 12080893 chr3R 12080943 12080991 7 92 4.5 5.0 4.8 1.2 113 chr3R 12080878 intron CG14741 - chr3R 12080934 intron CG14741 - chr3R 12080991 intron CG14741 - chr3R_7_12080001 chr3R_12080001 RAL-21 1747 chr3R 12097222 12097272 chr3R 12097346 12097393 14 121 3.5 4.0 3.8 2.9 171 chr3R 12097222 intron dpr17 + chr3R 12097308 intron dpr17 + chr3R 12097393 intron dpr17 + chr3R_14_12095001 chr3R_12095001 RAL-21 1748 chr3R 12111866 12111924 chr3R 12111971 12112020 11 87 1.5 4.0 2.8 2.9 154 chr3R 12111866 intergenic dpr17 + chr3R 12111943 intergenic not near genes chr3R 12112020 intergenic not near genes chr3R_11_12110001 chr3R_12110001 RAL-21 1749 chr3R 12125813 12125843 chr3R 12125920 12125950 5 107 2.0 0.0 1.0 2.5 137 chr3R 12125813 intron CG4702 - chr3R 12125882 intron CG4702 - chr3R 12125950 intron CG4702 - chr3R_5_12125001 chr3R_12125001 RAL-21 1750 chr3R 12183161 12183205 chr3R 12183267 12183311 9 102 3.0 3.5 3.2 2.1 150 chr3R 12183161 intergenic not near genes chr3R 12183236 intergenic not near genes chr3R 12183311 intergenic not near genes chr3R_9_12180001 chr3R_12180001 RAL-21 1751 chr3R 12267837 12267877 chr3R 12267937 12267977 10 100 4.0 3.5 3.8 2.1 140 chr3R 12267837 intron svp + chr3R 12267907 intron svp + chr3R 12267977 intron svp + chr3R_10_12265001 chr3R_12265001 RAL-21 1752 chr3R 12303266 12303305 chr3R 12303390 12303429 11 124 4.5 7.5 6.0 1.6 163 chr3R 12303266 intergenic svp + chr3R 12303348 intergenic not near genes chr3R 12303429 intergenic not near genes chr3R_11_12300001 chr3R_12300001 RAL-21 1753 chr3R 12344115 12344157 chr3R 12344211 12344254 10 96 1.0 2.5 1.8 3.6 139 chr3R 12344115 intergenic not near genes chr3R 12344184 intergenic not near genes chr3R 12344254 intergenic not near genes chr3R_10_12340001 chr3R_12340001 RAL-21 1754 chr3R 12462404 12462443 chr3R 12462520 12462524 11 109 3.0 2.5 2.8 2.9 120 chr3R 12462404 3` UTR CG12267 + chr3R 12462464 intergenic CG12267 +,CG5608 - chr3R 12462524 intergenic CG5608 -,CG12267 + chr3R_11_12460001 chr3R_12460001 RAL-21 1755 chr3R 943474 943483 chr3R 12589019 12589028 4 11645545 2.0 6.0 4.0 0.8 11645554 chr3R 943474 intron CG42621 + chr3R 6766251 5` UTR CR44930 + chr3R 12589028 intron Octbeta2R - chr3R_4_6765001 chr3R_6765001 RAL-21 1756 chr3R 12591481 12591515 chr3R 12591603 12591636 5 124 2.0 2.5 2.2 1.6 155 chr3R 12591481 intron Octbeta2R - chr3R 12591558 intron Octbeta2R - chr3R 12591636 intron Octbeta2R - chr3R_5_12590001 chr3R_12590001 RAL-21 1757 chr3R 12599368 12599394 chr3R 12599461 12599497 9 100 1.0 3.5 2.2 2.8 129 chr3R 12599368 intergenic not near genes chr3R 12599432 intergenic not near genes chr3R 12599497 intergenic not near genes chr3R_9_12595001 chr3R_12595001 RAL-21 1758 chr3R 12735162 12735182 chr3R 12735432 12735448 7 269 2.5 1.5 2.0 2.3 286 chr3R 12735162 intergenic not near genes chr3R 12735305 intergenic not near genes chr3R 12735448 intergenic not near genes chr3R_7_12735001 chr3R_12735001 RAL-21 1759 chr3R 12763117 12763154 chr3R 12763214 12763251 10 97 0.0 5.5 2.8 2.6 134 chr3R 12763117 intron beat-Vc - chr3R 12763184 intron beat-Vc - chr3R 12763251 intron beat-Vc - chr3R_10_12760001 chr3R_12760001 RAL-21 1760 chr3R 12819014 12819049 chr3R 12819117 12819152 8 103 1.5 1.5 1.5 3.2 138 chr3R 12819014 intergenic not near genes chr3R 12819083 intergenic not near genes chr3R 12819152 intergenic not near genes chr3R_8_12815001 chr3R_12815001 RAL-21 1761 chr3R 12866475 12866518 chr3R 12866646 12866689 11 171 3.5 7.0 5.2 1.8 214 chr3R 12866475 intergenic not near genes chr3R 12866582 intergenic not near genes chr3R 12866689 intergenic not near genes chr3R_11_12865001 chr3R_12865001 RAL-21 1762 chr3R 12883782 12883820 chr3R 12883912 12883946 8 132 2.5 2.5 2.5 2.3 164 chr3R 12883782 intergenic not near genes chr3R 12883864 intergenic not near genes chr3R 12883946 intergenic not near genes chr3R_8_12880001 chr3R_12880001 RAL-21 1763 chr3R 12885088 12885132 chr3R 12885214 12885259 15 124 3.0 2.5 2.8 3.9 171 chr3R 12885088 intergenic not near genes chr3R 12885174 intergenic not near genes chr3R 12885259 intergenic not near genes chr3R_15_12885001 chr3R_12885001 RAL-21 1764 chr3R 12894595 12894625 chr3R 12894710 12894758 7 130 0.5 0.0 0.2 5.8 163 chr3R 12894595 intergenic not near genes chr3R 12894676 intergenic not near genes chr3R 12894758 intergenic not near genes chr3R_7_12890001 chr3R_12890001 RAL-21 1765 chr3R 12920140 12920182 chr3R 12925363 12925374 copia 5 5216 0.5 4.0 2.2 1.6 5234 chr3R 12920140 intron beat-Vb + chr3R 12922757 intron beat-Vb + chr3R 12925374 intron beat-Vb + chr3R_5_12920001 chr3R_12920001 RAL-21 1766 chr3R 12935333 12935346 chr3R 12935457 12935470 5 123 2.0 0.0 1.0 2.5 137 chr3R 12935333 intergenic not near genes chr3R 12935402 intergenic not near genes chr3R 12935470 intergenic not near genes chr3R_5_12935001 chr3R_12935001 RAL-21 1767 chr3R 12947269 12947319 chr3R 12947451 12947500 10 174 2.0 1.5 1.8 3.6 231 chr3R 12947269 intergenic not near genes chr3R 12947384 intergenic not near genes chr3R 12947500 intergenic not near genes chr3R_10_12945001 chr3R_12945001 RAL-21 1768 chr3R 12972542 12972579 chr3R 12972701 12972738 11 159 3.0 5.0 4.0 2.2 196 chr3R 12972542 intron CG7381 - chr3R 12972640 intron CG7381 - chr3R 12972738 intron CG7381 - chr3R_11_12970001 chr3R_12970001 RAL-21 1769 chr3R 13059947 13059973 chr3R 13060162 13060185 10 213 3.5 2.5 3.0 2.5 238 chr3R 13059947 intron sim + chr3R 13060066 intron sim + chr3R 13060185 intron sim + chr3R_10_13060001 chr3R_13060001 RAL-21 1770 chr3R 13064765 13064794 chr3R 13064883 13064893 5 115 0.5 0.0 0.2 4.2 128 chr3R 13064765 intron sim + chr3R 13064829 intron sim + chr3R 13064893 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-21 1771 chr3R 13066991 13067001 chr3R 13067098 13067108 4 107 7.0 7.0 7.0 0.5 117 chr3R 13066991 intron sim + chr3R 13067050 intron sim + chr3R 13067108 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-21 1772 chr3R 13067820 13067867 chr3R 13067920 13067967 8 98 2.5 3.5 3.0 2.0 147 chr3R 13067820 intron sim + chr3R 13067894 intron sim + chr3R 13067967 intron sim + chr3R_8_13065001 chr3R_13065001 RAL-21 1773 chr3R 13075356 13075389 chr3R 13075444 13075489 8 95 3.0 2.5 2.8 2.1 133 chr3R 13075356 intron sim + chr3R 13075422 intron sim + chr3R 13075489 intron sim + chr3R_8_13075001 chr3R_13075001 RAL-21 1774 chr3R 13135819 13135839 chr3R 13138004 13138024 pogo 8 2185 3.5 4.0 3.8 1.7 2205 chr3R 13135819 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136922 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138024 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 RAL-21 1775 chr3R 13143060 13143066 chr3R 13148617 13148662 mdg3 4 5585 2.0 2.5 2.2 1.2 5602 chr3R 13143060 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145861 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148662 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-21 1776 chr3R 13314091 13314128 chr3R 13318887 13318936 Doc 4 4805 2.0 6.5 4.2 0.8 4845 chr3R 13314091 intergenic not near genes chr3R 13316514 intergenic not near genes chr3R 13318936 intergenic CG45080 - chr3R_4_13315001 chr3R_13315001 RAL-21 1777 chr3R 13418646 13418681 chr3R 13418742 13418777 19 95 2.5 3.5 3.0 4.8 131 chr3R 13418646 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_19_13415001 chr3R_13415001 RAL-21 1778 chr3R 13435371 13435420 chr3R 13435566 13435611 8 194 3.5 1.5 2.5 2.3 240 chr3R 13435371 intergenic yrt - chr3R 13435491 intergenic not near genes chr3R 13435611 intergenic not near genes chr3R_8_13435001 chr3R_13435001 RAL-21 1779 chr3R 13517210 13517213 chr3R 13520047 13520047 jockey 5 2836 8.5 0.0 4.2 1.0 2837 chr3R 13517210 intergenic not near genes chr3R 13518628 intergenic not near genes chr3R 13520047 intergenic not near genes chr3R_5_13515001 chr3R_13515001 RAL-21 1780 chr3R 13517240 13517259 chr3R 13520045 13520096 jockey 7 2832 3.5 0.0 1.8 2.5 2856 chr3R 13517240 intergenic not near genes chr3R 13518668 intergenic not near genes chr3R 13520096 intergenic not near genes chr3R_7_13515001 chr3R_13515001 RAL-21 1781 chr3R 13598076 13598104 chr3R 13598174 13598202 7 98 3.0 3.5 3.2 1.7 126 chr3R 13598076 intergenic not near genes chr3R 13598139 intergenic not near genes chr3R 13598202 intergenic not near genes chr3R_7_13595001 chr3R_13595001 RAL-21 1782 chr3R 13603036 13603062 chr3R 13603147 13603173 8 109 2.5 3.5 3.0 2.0 137 chr3R 13603036 intergenic not near genes chr3R 13603104 intergenic not near genes chr3R 13603173 intergenic not near genes chr3R_8_13600001 chr3R_13600001 RAL-21 1783 chr3R 13625675 13625721 chr3R 13625775 13625822 5 101 4.5 3.5 4.0 1.0 147 chr3R 13625675 intergenic not near genes chr3R 13625748 intergenic not near genes chr3R 13625822 intergenic not near genes chr3R_5_13625001 chr3R_13625001 RAL-21 1784 chr3R 13659718 13659832 chr3R 13659844 13659941 4 112 0.0 0.0 0.0 4.0 223 chr3R 13659718 intron Hrb87F - chr3R 13659830 intron Hrb87F - chr3R 13659941 intron Hrb87F - chr3R_4_13655001 chr3R_13655001 RAL-21 1785 chr3R 13765243 13765271 chr3R 13765346 13765375 5 103 3.5 5.5 4.5 0.9 132 chr3R 13765243 intergenic not near genes chr3R 13765309 intergenic CG9312 + chr3R 13765375 intergenic CG9312 + chr3R_5_13765001 chr3R_13765001 RAL-21 1786 chr3R 13782032 13782088 chr3R 13782133 13782188 15 101 1.5 1.5 1.5 6.0 156 chr3R 13782032 exon CG9286 + chr3R 13782110 intergenic CG9286 +,Dip-B + chr3R 13782188 intergenic Dip-B +,CG9286 + chr3R_15_13780001 chr3R_13780001 RAL-21 1787 chr3R 13846761 13846794 chr3R 13846858 13846892 7 98 4.0 3.0 3.5 1.6 131 chr3R 13846761 intergenic not near genes chr3R 13846826 intergenic not near genes chr3R 13846892 intergenic not near genes chr3R_7_13845001 chr3R_13845001 RAL-21 1788 chr3R 13925966 13926017 chr3R 13926063 13926109 7 83 2.5 1.0 1.8 2.5 143 chr3R 13925966 intergenic not near genes chr3R 13926038 intergenic not near genes chr3R 13926109 intergenic not near genes chr3R_7_13925001 chr3R_13925001 RAL-21 1789 chr3R 13974532 13974537 chr3R 13974629 13974634 4 97 0.0 5.5 2.8 1.1 102 chr3R 13974532 intron,5` UTR rdx -,CR43460 + chr3R 13974583 intron,5` UTR rdx -,CR43460 + chr3R 13974634 intron,5` UTR rdx -,CR43460 + chr3R_4_13970001 chr3R_13970001 RAL-21 1790 chr3R 14021630 14021680 chr3R 14023465 14023517 S-element 20 1832 5.0 2.0 3.5 4.4 1887 chr3R 14021630 intron rdx - chr3R 14022574 intron rdx - chr3R 14023517 intron rdx - chr3R_20_14020001 chr3R_14020001 RAL-21 1791 chr3R 14054816 14054841 chr3R 14054917 14054942 5 96 4.5 3.5 4.0 1.0 126 chr3R 14054816 intergenic not near genes chr3R 14054879 intergenic not near genes chr3R 14054942 intergenic not near genes chr3R_5_14050001 chr3R_14050001 RAL-21 1792 chr3R 14058109 14058149 chr3R 14058242 14058289 17 139 4.5 4.5 4.5 3.1 180 chr3R 14058109 intron foxo + chr3R 14058199 intron foxo + chr3R 14058289 intron foxo + chr3R_17_14055001 chr3R_14055001 RAL-21 1793 chr3R 14067134 14067152 chr3R 14067233 14067250 7 99 4.0 3.0 3.5 1.6 116 chr3R 14067134 exon foxo + chr3R 14067192 intron foxo + chr3R 14067250 intron foxo + chr3R_7_14065001 chr3R_14065001 RAL-21 1794 chr3R 14077612 14077653 chr3R 14077709 14077750 13 97 4.0 5.0 4.5 2.4 138 chr3R 14077612 intron foxo + chr3R 14077681 intron foxo + chr3R 14077750 intron foxo + chr3R_13_14075001 chr3R_14075001 RAL-21 1795 chr3R 14109068 14109113 chr3R 14109169 14109214 16 100 3.0 6.5 4.8 2.8 146 chr3R 14109068 intergenic CR44237 -,Or88a + chr3R 14109141 intergenic CR44237 -,Or88a + chr3R 14109214 intergenic CR44237 -,Or88a + chr3R_16_14105001 chr3R_14105001 RAL-21 1796 chr3R 14117425 14117469 chr3R 14117521 14117565 12 95 5.0 5.5 5.2 1.9 140 chr3R 14117425 intron Kif19A - chr3R 14117495 intron Kif19A - chr3R 14117565 intron Kif19A - chr3R_12_14115001 chr3R_14115001 RAL-21 1797 chr3R 14174952 14174989 chr3R 14175043 14175051 8 95 2.5 2.5 2.5 2.3 99 chr3R 14174952 3` UTR Dop1R1 - chr3R 14175002 3` UTR Dop1R1 - chr3R 14175051 3` UTR Dop1R1 - chr3R_8_14175001 chr3R_14175001 RAL-21 1798 chr3R 14180791 14180818 chr3R 14185576 14185603 F-element 12 4785 4.5 0.0 2.2 3.8 4812 chr3R 14180791 intron Dop1R1 - chr3R 14183197 intron Dop1R1 - chr3R 14185603 intron Dop1R1 - chr3R_12_14180001 chr3R_14180001 RAL-21 1799 chr3R 14248713 14248737 chr3R 14248810 14248835 7 98 1.5 3.0 2.2 2.2 122 chr3R 14248713 intergenic not near genes chr3R 14248774 intergenic not near genes chr3R 14248835 intergenic not near genes chr3R_7_14245001 chr3R_14245001 RAL-21 1800 chr3R 14253687 14253719 chr3R 14253786 14253818 13 98 3.0 3.0 3.0 3.2 131 chr3R 14253687 intron Aats-met - chr3R 14253752 intron Aats-met - chr3R 14253818 intron Aats-met - chr3R_13_14250001 chr3R_14250001 RAL-21 1801 chr3R 14364058 14364082 chr3R 14364154 14364178 5 92 4.5 5.0 4.8 0.9 120 chr3R 14364058 intron NK7.1 - chr3R 14364118 intron NK7.1 - chr3R 14364178 intron NK7.1 - chr3R_5_14360001 chr3R_14360001 RAL-21 1802 chr3R 14408522 14408529 chr3R 14408631 14408638 4 109 6.5 4.5 5.5 0.6 116 chr3R 14408522 intron cv-c - chr3R 14408580 intron cv-c - chr3R 14408638 intron cv-c - chr3R_4_14405001 chr3R_14405001 RAL-21 1803 chr3R 14482702 14482732 chr3R 14483664 14483694 9 961 1.5 4.0 2.8 2.4 992 chr3R 14482702 intergenic not near genes chr3R 14483198 intergenic not near genes chr3R 14483694 intergenic not near genes chr3R_9_14480001 chr3R_14480001 RAL-21 1804 chr3R 14546062 14546070 chr3R 14546147 14546167 5 95 2.5 3.0 2.8 1.3 105 chr3R 14546062 intron Pde6 - chr3R 14546114 intron Pde6 - chr3R 14546167 intron Pde6 - chr3R_5_14545001 chr3R_14545001 RAL-21 1805 chr3R 14549791 14549826 chr3R 14549882 14549918 7 93 2.5 2.0 2.2 2.2 127 chr3R 14549791 intron Pde6 - chr3R 14549854 intron Pde6 - chr3R 14549918 intron Pde6 - chr3R_7_14545001 chr3R_14545001 RAL-21 1806 chr3R 14608450 14608477 chr3R 14608562 14608589 9 111 3.0 4.5 3.8 1.9 139 chr3R 14608450 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608589 intergenic not near genes chr3R_9_14605001 chr3R_14605001 RAL-21 1807 chr3R 14698296 14698336 chr3R 14698892 14698933 12 596 28.0 26.0 27.0 0.4 637 chr3R 14698296 3` UTR kibra - chr3R 14698614 3` UTR kibra - chr3R 14698933 exon kibra - chr3R_12_14695001 chr3R_14695001 RAL-21 1808 chr3R 14704366 14704413 chr3R 14704463 14704510 20 95 5.0 5.0 5.0 3.3 144 chr3R 14704366 intron kibra - chr3R 14704438 intron kibra - chr3R 14704510 intron kibra - chr3R_20_14700001 chr3R_14700001 RAL-21 1809 chr3R 14764552 14764584 chr3R 14764670 14764705 4 120 2.5 3.0 2.8 1.1 153 chr3R 14764552 intron jvl + chr3R 14764628 intron jvl + chr3R 14764705 intron jvl + chr3R_4_14760001 chr3R_14760001 RAL-21 1810 chr3R 14842568 14842595 chr3R 14842654 14842699 9 94 2.5 3.5 3.0 2.2 131 chr3R 14842568 intron btsz - chr3R 14842634 intron btsz - chr3R 14842699 intron btsz - chr3R_9_14840001 chr3R_14840001 RAL-21 1811 chr3R 14851455 14851491 chr3R 14851610 14851648 9 156 8.0 5.5 6.8 1.2 193 chr3R 14851455 intron btsz - chr3R 14851552 intron btsz - chr3R 14851648 intron btsz - chr3R_9_14850001 chr3R_14850001 RAL-21 1812 chr3R 14869853 14869893 chr3R 14869964 14870004 13 111 3.0 0.5 1.8 4.6 151 chr3R 14869853 intron btsz - chr3R 14869928 intron btsz - chr3R 14870004 intron btsz - chr3R_13_14865001 chr3R_14865001 RAL-21 1813 chr3R 14954810 14954828 chr3R 14955017 14955053 4 222 3.0 1.5 2.2 1.2 243 chr3R 14954810 intergenic not near genes chr3R 14954932 intergenic not near genes chr3R 14955053 intergenic not near genes chr3R_4_14950001 chr3R_14950001 RAL-21 1814 chr3R 15026313 15026338 chr3R 15026419 15026444 5 106 3.5 6.5 5.0 0.8 131 chr3R 15026313 intergenic not near genes chr3R 15026378 intergenic not near genes chr3R 15026444 intergenic not near genes chr3R_5_15025001 chr3R_15025001 RAL-21 1815 chr3R 15032454 15032460 chr3R 15032561 15032567 4 107 0.0 2.5 1.2 1.8 113 chr3R 15032454 intergenic not near genes chr3R 15032510 intergenic not near genes chr3R 15032567 intergenic not near genes chr3R_4_15030001 chr3R_15030001 RAL-21 1816 chr3R 15059264 15059470 chr3R 15059478 15059577 BS 12 207 0.0 0.0 0.0 12.0 313 chr3R 15059264 intron dpr9 - chr3R 15059420 intron dpr9 - chr3R 15059577 intron dpr9 - chr3R_12_15055001 chr3R_15055001 RAL-21 1817 chr3R 15079791 15079839 chr3R 15080050 15080100 pogo 15 260 5.5 5.5 5.5 2.3 309 chr3R 15079791 3` UTR CG6966 - chr3R 15079946 3` UTR CG6966 - chr3R 15080100 3` UTR CG6966 - chr3R_15_15075001 chr3R_15075001 RAL-21 1818 chr3R 15102478 15102526 chr3R 15109753 15109801 412 13 7275 6.0 4.0 5.0 2.2 7323 chr3R 15102478 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109801 intron CG42788 - chr3R_13_15105001 chr3R_15105001 RAL-21 1819 chr3R 15114899 15114933 chr3R 15114996 15115030 8 97 5.0 4.5 4.8 1.4 131 chr3R 15114899 intron CG42788 - chr3R 15114964 intron CG42788 - chr3R 15115030 intron CG42788 - chr3R_8_15110001 chr3R_15110001 RAL-21 1820 chr3R 15127762 15127807 chr3R 15127862 15127872 7 95 1.5 3.0 2.2 2.2 110 chr3R 15127762 intron CG42788 - chr3R 15127817 intron CG42788 - chr3R 15127872 intron CG42788 - chr3R_7_15125001 chr3R_15125001 RAL-21 1821 chr3R 15132045 15132059 chr3R 15135125 15135129 Juan 11 3079 16.5 16.0 16.2 0.6 3084 chr3R 15132045 intergenic CG42788 - chr3R 15133587 intergenic not near genes chr3R 15135129 intergenic CG6912 - chr3R_11_15130001 chr3R_15130001 RAL-21 1822 chr3R 15132062 15132078 chr3R 15135115 15135158 Juan 8 3077 16.5 12.5 14.5 0.5 3096 chr3R 15132062 intergenic CG42788 - chr3R 15133610 intergenic not near genes chr3R 15135158 3` UTR CG6912 - chr3R_8_15130001 chr3R_15130001 RAL-21 1823 chr3R 15130879 15130879 chr3R 15141221 15141241 5 10345 8.5 16.0 12.2 0.4 10362 chr3R 15130879 intron CG42788 - chr3R 15136060 exon CG6912 - chr3R 15141241 exon CG3987 + chr3R_5_15135001 chr3R_15135001 RAL-21 1824 chr3R 15143903 15143935 chr3R 15144106 15144138 11 203 4.5 3.0 3.8 2.3 235 chr3R 15143903 intron GlyS - chr3R 15144020 intron GlyS - chr3R 15144138 intron GlyS - chr3R_11_15140001 chr3R_15140001 RAL-21 1825 chr3R 15162529 15162543 chr3R 15167315 15167330 F-element 7 4786 12.0 6.5 9.2 0.7 4801 chr3R 15162529 intron Gyc88E + chr3R 15164930 intron Gyc88E + chr3R 15167330 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-21 1826 chr3R 15190633 15190676 chr3R 15190778 15190821 18 145 8.0 6.5 7.2 2.2 188 chr3R 15190633 3` UTR Gyc88E + chr3R 15190727 3` UTR Gyc88E + chr3R 15190821 3` UTR Gyc88E + chr3R_18_15190001 chr3R_15190001 RAL-21 1827 chr3R 15265391 15265431 chr3R 15265496 15265536 6 105 2.5 5.0 3.8 1.2 145 chr3R 15265391 intergenic Set +,Oscp + chr3R 15265464 intergenic Oscp +,Set + chr3R 15265536 intergenic Oscp +,Set + chr3R_6_15265001 chr3R_15265001 RAL-21 1828 chr3R 15416236 15416268 chr3R 15416336 15416367 4 100 3.5 4.5 4.0 0.8 131 chr3R 15416236 3` UTR Atx2 + chr3R 15416302 3` UTR Atx2 + chr3R 15416367 3` UTR Atx2 + chr3R_4_15415001 chr3R_15415001 RAL-21 1829 chr3R 15445893 15445902 chr3R 15445998 15446007 4 105 3.0 0.0 1.5 1.6 114 chr3R 15445893 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446007 intron AdamTS-A - chr3R_4_15445001 chr3R_15445001 RAL-21 1830 chr3R 15592874 15592924 chr3R 15592978 15593028 11 104 2.0 5.5 3.8 2.3 154 chr3R 15592874 intergenic not near genes chr3R 15592951 intergenic not near genes chr3R 15593028 intergenic not near genes chr3R_11_15590001 chr3R_15590001 RAL-21 1831 chr3R 15594665 15594672 chr3R 15594743 15594762 4 90 0.0 3.5 1.8 1.4 97 chr3R 15594665 intergenic not near genes chr3R 15594714 intergenic not near genes chr3R 15594762 intergenic not near genes chr3R_4_15590001 chr3R_15590001 RAL-21 1832 chr3R 15601152 15601184 chr3R 15608692 15608720 412 5 7540 4.0 5.5 4.8 0.9 7568 chr3R 15601152 intergenic not near genes chr3R 15604936 intergenic not near genes chr3R 15608720 intergenic not near genes chr3R_5_15600001 chr3R_15600001 RAL-21 1833 chr3R 15618713 15618759 chr3R 15626207 15626253 blood 10 7490 2.5 3.0 2.8 2.6 7540 chr3R 15618713 intergenic not near genes chr3R 15622483 intergenic not near genes chr3R 15626253 intergenic not near genes chr3R_10_15620001 chr3R_15620001 RAL-21 1834 chr3R 15635198 15635238 chr3R 15635339 15635370 4 136 0.0 4.5 2.2 1.2 172 chr3R 15635198 intergenic CG43335 + chr3R 15635284 intergenic CG43335 + chr3R 15635370 intergenic CG43335 + chr3R_4_15635001 chr3R_15635001 RAL-21 1835 chr3R 15646771 15646798 chr3R 15646874 15646901 6 103 4.5 2.5 3.5 1.3 130 chr3R 15646771 intergenic not near genes chr3R 15646836 intergenic not near genes chr3R 15646901 intergenic not near genes chr3R_6_15645001 chr3R_15645001 RAL-21 1836 chr3R 15658581 15658625 chr3R 15658729 15658733 5 126 0.0 1.5 0.8 2.8 152 chr3R 15658581 intergenic not near genes chr3R 15658657 intergenic not near genes chr3R 15658733 intergenic not near genes chr3R_5_15655001 chr3R_15655001 RAL-21 1837 chr3R 15691160 15691330 chr3R 15691285 15691437 11 115 0.0 0.0 0.0 11.0 277 chr3R 15691160 intergenic not near genes chr3R 15691298 intergenic not near genes chr3R 15691437 intergenic not near genes chr3R_11_15690001 chr3R_15690001 RAL-21 1838 chr3R 15715799 15715831 chr3R 15715898 15715936 10 103 5.5 3.0 4.2 1.9 137 chr3R 15715799 exon CG31294 - chr3R 15715868 intron CG31294 - chr3R 15715936 exon CG31294 - chr3R_10_15715001 chr3R_15715001 RAL-21 1839 chr3R 15716821 15716866 chr3R 15716940 15716968 8 115 2.5 3.0 2.8 2.1 147 chr3R 15716821 intergenic CG31294 - chr3R 15716894 intergenic CG31294 - chr3R 15716968 intergenic CG31294 - chr3R_8_15715001 chr3R_15715001 RAL-21 1840 chr3R 15735224 15735237 chr3R 15739964 15739977 F-element 5 4740 1.5 5.5 3.5 1.1 4753 chr3R 15735224 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739977 intergenic not near genes chr3R_5_15735001 chr3R_15735001 RAL-21 1841 chr3R 15790112 15790266 chr3R 15790240 15790404 18 131 18.0 17.5 17.8 1.0 292 chr3R 15790112 exon c(3)G - chr3R 15790258 exon c(3)G - chr3R 15790404 exon c(3)G - chr3R_18_15790001 chr3R_15790001 RAL-21 1842 chr3R 15790282 15790398 chr3R 15790573 15790624 7 254 20.0 23.0 21.5 0.3 342 chr3R 15790282 exon c(3)G - chr3R 15790453 exon c(3)G - chr3R 15790624 exon c(3)G - chr3R_7_15790001 chr3R_15790001 RAL-21 1843 chr3R 15790819 15790869 chr3R 15790955 15790975 16 132 22.5 25.5 24.0 0.6 156 chr3R 15790819 exon c(3)G - chr3R 15790897 intron c(3)G - chr3R 15790975 exon c(3)G - chr3R_16_15790001 chr3R_15790001 RAL-21 1844 chr3R 15878084 15878099 chr3R 15878192 15878207 4 108 2.5 4.0 3.2 1.0 123 chr3R 15878084 intergenic not near genes chr3R 15878146 intergenic not near genes chr3R 15878207 intergenic not near genes chr3R_4_15875001 chr3R_15875001 RAL-21 1845 chr3R 15891645 15891676 chr3R 15892056 15892088 6 409 3.0 1.5 2.2 1.9 443 chr3R 15891645 intron CG14877 - chr3R 15891866 intron CG14877 - chr3R 15892088 intron CG14877 - chr3R_6_15890001 chr3R_15890001 RAL-21 1846 chr3R 15953310 15953361 chr3R 15953405 15953440 11 94 2.0 4.0 3.0 2.8 130 chr3R 15953310 intron Sap47 + chr3R 15953375 intron Sap47 + chr3R 15953440 intron Sap47 + chr3R_11_15950001 chr3R_15950001 RAL-21 1847 chr3R 16033397 16033442 chr3R 16033498 16033543 16 101 1.5 4.5 3.0 4.0 146 chr3R 16033397 intron pnr + chr3R 16033470 intron pnr + chr3R 16033543 intron pnr + chr3R_16_16030001 chr3R_16030001 RAL-21 1848 chr3R 16124695 16124720 chr3R 16124786 16124816 16 95 3.0 6.0 4.5 2.9 121 chr3R 16124695 intron Sb + chr3R 16124756 intron Sb + chr3R 16124816 intron Sb + chr3R_16_16120001 chr3R_16120001 RAL-21 1849 chr3R 16285227 16285275 chr3R 16285323 16285371 18 92 4.5 4.0 4.2 3.5 144 chr3R 16285227 intron gish + chr3R 16285299 intron gish + chr3R 16285371 intron gish + chr3R_18_16285001 chr3R_16285001 RAL-21 1850 chr3R 16357672 16357722 chr3R 16358009 16358040 12 331 2.5 1.5 2.0 4.0 368 chr3R 16357672 3` UTR CG17931 - chr3R 16357856 3` UTR CG17931 - chr3R 16358040 3` UTR CG17931 - chr3R_12_16355001 chr3R_16355001 RAL-21 1851 chr3R 16374280 16374326 chr3R 16374417 16374463 17 137 3.0 2.0 2.5 4.9 183 chr3R 16374280 intergenic ss - chr3R 16374372 intergenic ss - chr3R 16374463 3` UTR ss - chr3R_17_16370001 chr3R_16370001 RAL-21 1852 chr3R 16704578 16704610 chr3R 16704677 16704709 5 99 3.5 3.5 3.5 1.1 131 chr3R 16704578 intron Ubx - chr3R 16704644 intron Ubx - chr3R 16704709 intron Ubx - chr3R_5_16700001 chr3R_16700001 RAL-21 1853 chr3R 16708906 16708929 chr3R 16709010 16709033 5 100 6.0 1.0 3.5 1.1 127 chr3R 16708906 intron Ubx - chr3R 16708970 intron Ubx - chr3R 16709033 intron Ubx - chr3R_5_16705001 chr3R_16705001 RAL-21 1854 chr3R 16756310 16756354 chr3R 16762520 16762542 diver 4 6190 1.5 3.0 2.2 1.2 6232 chr3R 16756310 intron bxd - chr3R 16759426 intron bxd - chr3R 16762542 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-21 1855 chr3R 16795272 16795317 chr3R 16795382 16795427 6 109 2.5 3.0 2.8 1.6 155 chr3R 16795272 intergenic not near genes chr3R 16795350 intergenic not near genes chr3R 16795427 intergenic not near genes chr3R_6_16795001 chr3R_16795001 RAL-21 1856 chr3R 16820239 16820277 chr3R 16820353 16820369 10 112 2.0 4.0 3.0 2.5 130 chr3R 16820239 intron abd-A - chr3R 16820304 intron abd-A - chr3R 16820369 intron abd-A - chr3R_10_16820001 chr3R_16820001 RAL-21 1857 chr3R 16921812 16921859 chr3R 16921916 16921963 10 103 3.5 3.0 3.2 2.4 151 chr3R 16921812 intron iab-8 - chr3R 16921888 intron iab-8 - chr3R 16921963 intron iab-8 - chr3R_10_16920001 chr3R_16920001 RAL-21 1858 chr3R 17012941 17012977 chr3R 17013036 17013065 11 94 5.0 6.0 5.5 1.7 124 chr3R 17012941 intergenic CG8907 + chr3R 17013003 intergenic CG8907 + chr3R 17013065 intergenic not near genes chr3R_11_17010001 chr3R_17010001 RAL-21 1859 chr3R 17178595 17178627 chr3R 17178892 17178924 7 297 1.5 2.5 2.0 2.3 329 chr3R 17178595 intron Mur89F - chr3R 17178760 intron Mur89F - chr3R 17178924 intron Mur89F - chr3R_7_17175001 chr3R_17175001 RAL-21 1860 chr3R 17268659 17268693 chr3R 17268801 17268835 10 142 5.5 2.5 4.0 2.0 176 chr3R 17268659 intergenic not near genes chr3R 17268747 intergenic not near genes chr3R 17268835 intergenic not near genes chr3R_10_17265001 chr3R_17265001 RAL-21 1861 chr3R 17290427 17290473 chr3R 17290533 17290578 9 106 3.5 2.5 3.0 2.2 151 chr3R 17290427 intergenic not near genes chr3R 17290502 intergenic not near genes chr3R 17290578 intergenic not near genes chr3R_9_17290001 chr3R_17290001 RAL-21 1862 chr3R 17294667 17294698 chr3R 17295113 17295150 BS 4 451 3.0 0.0 1.5 1.6 483 chr3R 17294667 intergenic not near genes chr3R 17294908 intergenic not near genes chr3R 17295150 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-21 1863 chr3R 17335145 17335162 chr3R 17335234 17335246 4 90 0.5 0.5 0.5 2.7 101 chr3R 17335145 intron beat-IIa - chr3R 17335196 intron beat-IIa - chr3R 17335246 intron beat-IIa - chr3R_4_17335001 chr3R_17335001 RAL-21 1864 chr3R 17346672 17346708 chr3R 17348255 17348291 F-element 10 1583 7.0 7.0 7.0 1.2 1619 chr3R 17346672 intron beat-IIa - chr3R 17347482 intron beat-IIa - chr3R 17348291 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-21 1865 chr3R 17351832 17351865 chr3R 17351920 17351964 8 96 1.5 2.0 1.8 2.9 132 chr3R 17351832 intron beat-IIa - chr3R 17351898 intron beat-IIa - chr3R 17351964 intron beat-IIa - chr3R_8_17350001 chr3R_17350001 RAL-21 1866 chr3R 17355478 17355518 chr3R 17355576 17355601 5 85 4.5 2.0 3.2 1.2 123 chr3R 17355478 intron beat-IIa - chr3R 17355540 intron beat-IIa - chr3R 17355601 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-21 1867 chr3R 17359746 17359775 chr3R 17359934 17359963 4 188 2.5 2.0 2.2 1.2 217 chr3R 17359746 intron beat-IIa - chr3R 17359854 intron beat-IIa - chr3R 17359963 intron beat-IIa - chr3R_4_17355001 chr3R_17355001 RAL-21 1868 chr3R 17406983 17407030 chr3R 17407105 17407152 15 122 3.0 3.0 3.0 3.8 169 chr3R 17406983 intron CG42798 + chr3R 17407068 5` UTR CG42798 + chr3R 17407152 exon CG42798 + chr3R_15_17405001 chr3R_17405001 RAL-21 1869 chr3R 17415790 17415804 chr3R 17415894 17415909 5 105 9.0 4.0 6.5 0.7 119 chr3R 17415790 exon CG5866 + chr3R 17415850 exon CG5866 + chr3R 17415909 exon CG5866 + chr3R_5_17415001 chr3R_17415001 RAL-21 1870 chr3R 17415808 17415834 chr3R 17415888 17415939 11 101 6.0 3.5 4.8 1.9 131 chr3R 17415808 exon CG5866 + chr3R 17415874 exon CG5866 + chr3R 17415939 exon CG5866 + chr3R_11_17415001 chr3R_17415001 RAL-21 1871 chr3R 17423855 17423890 chr3R 17423971 17424003 5 114 4.0 3.5 3.8 1.0 148 chr3R 17423855 intergenic not near genes chr3R 17423929 intergenic not near genes chr3R 17424003 intergenic not near genes chr3R_5_17420001 chr3R_17420001 RAL-21 1872 chr3R 17452644 17452697 chr3R 17452740 17452793 8 92 0.5 3.0 1.8 2.9 149 chr3R 17452644 intergenic not near genes chr3R 17452718 intergenic not near genes chr3R 17452793 intergenic not near genes chr3R_8_17450001 chr3R_17450001 RAL-21 1873 chr3R 17461186 17461229 chr3R 17461279 17461331 11 100 4.0 1.0 2.5 3.1 145 chr3R 17461186 intergenic not near genes chr3R 17461258 intergenic not near genes chr3R 17461331 intergenic not near genes chr3R_11_17460001 chr3R_17460001 RAL-21 1874 chr3R 17521572 17521578 chr3R 17521716 17521733 5 162 1.5 1.0 1.2 2.3 161 chr3R 17521572 intergenic not near genes chr3R 17521652 intergenic not near genes chr3R 17521733 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-21 1875 chr3R 17522199 17522215 chr3R 17522306 17522323 5 111 7.0 0.5 3.8 1.0 124 chr3R 17522199 intergenic not near genes chr3R 17522261 intergenic not near genes chr3R 17522323 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-21 1876 chr3R 17554343 17554386 chr3R 17554640 17554675 10 289 3.5 6.5 5.0 1.7 332 chr3R 17554343 intergenic not near genes chr3R 17554509 intergenic not near genes chr3R 17554675 intergenic not near genes chr3R_10_17550001 chr3R_17550001 RAL-21 1877 chr3R 17591272 17591320 chr3R 17591725 17591766 F-element 10 448 2.5 3.0 2.8 2.6 494 chr3R 17591272 intergenic not near genes chr3R 17591519 intergenic not near genes chr3R 17591766 intergenic not near genes chr3R_10_17590001 chr3R_17590001 RAL-21 1878 chr3R 17638308 17638344 chr3R 17638809 17638850 roo 11 504 6.5 5.0 5.8 1.6 542 chr3R 17638308 intron CG43175 + chr3R 17638579 intron CG43175 + chr3R 17638850 intron,intron CG43175 +,CR45222 + chr3R_11_17635001 chr3R_17635001 RAL-21 1879 chr3R 17647227 17647262 chr3R 17647342 17647376 9 114 3.0 5.5 4.2 1.7 149 chr3R 17647227 intergenic CG14322 + chr3R 17647302 intergenic CG14322 + chr3R 17647376 intergenic CG14322 + chr3R_9_17645001 chr3R_17645001 RAL-21 1880 chr3R 17734824 17734860 chr3R 17734958 17734994 8 134 5.5 1.5 3.5 1.8 170 chr3R 17734824 intergenic CG14321 + chr3R 17734909 intergenic not near genes chr3R 17734994 intergenic not near genes chr3R_8_17730001 chr3R_17730001 RAL-21 1881 chr3R 17823190 17823225 chr3R 17823295 17823318 11 104 5.5 2.5 4.0 2.2 128 chr3R 17823190 intron tinc + chr3R 17823254 intron tinc + chr3R 17823318 intron tinc + chr3R_11_17820001 chr3R_17820001 RAL-21 1882 chr3R 17852237 17852273 chr3R 17852332 17852367 7 94 1.0 2.5 1.8 2.5 130 chr3R 17852237 5` UTR tinc + chr3R 17852302 5` UTR tinc + chr3R 17852367 5` UTR tinc + chr3R_7_17850001 chr3R_17850001 RAL-21 1883 chr3R 17895322 17895375 chr3R 17895431 17895486 13 110 3.5 4.5 4.0 2.6 164 chr3R 17895322 intron Rim - chr3R 17895404 intron Rim - chr3R 17895486 intron Rim - chr3R_13_17895001 chr3R_17895001 RAL-21 1884 chr3R 17919561 17919607 chr3R 17919659 17919706 7 96 0.0 1.5 0.8 3.9 145 chr3R 17919561 intergenic cpo + chr3R 17919634 intergenic cpo + chr3R 17919706 intergenic cpo + chr3R_7_17915001 chr3R_17915001 RAL-21 1885 chr3R 17925863 17925879 chr3R 17927317 17927366 hobo 6 1465 1.5 3.5 2.5 1.7 1503 chr3R 17925863 intron cpo + chr3R 17926614 intron cpo + chr3R 17927366 intron cpo + chr3R_6_17925001 chr3R_17925001 RAL-21 1886 chr3R 18041738 18041764 chr3R 18041835 18041861 14 96 0.5 1.0 0.8 7.8 123 chr3R 18041738 intergenic not near genes chr3R 18041800 intergenic not near genes chr3R 18041861 intergenic not near genes chr3R_14_18040001 chr3R_18040001 RAL-21 1887 chr3R 18122876 18122917 chr3R 18122973 18123014 7 97 1.5 3.5 2.5 2.0 138 chr3R 18122876 intron sr + chr3R 18122945 intron sr + chr3R 18123014 intron sr + chr3R_7_18120001 chr3R_18120001 RAL-21 1888 chr3R 18136214 18136251 chr3R 18136348 18136383 9 134 4.5 5.0 4.8 1.6 169 chr3R 18136214 intergenic not near genes chr3R 18136298 intergenic not near genes chr3R 18136383 intergenic not near genes chr3R_9_18135001 chr3R_18135001 RAL-21 1889 chr3R 18143558 18143589 chr3R 18143667 18143698 11 109 2.5 7.0 4.8 1.9 140 chr3R 18143558 intergenic not near genes chr3R 18143628 intergenic not near genes chr3R 18143698 intergenic not near genes chr3R_11_18140001 chr3R_18140001 RAL-21 1890 chr3R 18235197 18235244 chr3R 18235387 18235440 18 190 4.5 3.5 4.0 3.6 243 chr3R 18235197 intergenic not near genes chr3R 18235318 intergenic not near genes chr3R 18235440 intergenic not near genes chr3R_18_18235001 chr3R_18235001 RAL-21 1891 chr3R 18338984 18339024 chr3R 18339108 18339148 13 123 0.0 3.0 1.5 5.2 164 chr3R 18338984 intron CG15803 - chr3R 18339066 intron CG15803 - chr3R 18339148 intron CG15803 - chr3R_13_18335001 chr3R_18335001 RAL-21 1892 chr3R 18352552 18352603 chr3R 18352665 18352692 8 110 1.0 1.5 1.2 3.6 140 chr3R 18352552 intron CG15803 - chr3R 18352622 intron CG15803 - chr3R 18352692 intron CG15803 - chr3R_8_18350001 chr3R_18350001 RAL-21 1893 chr3R 18472278 18472282 chr3R 18472399 18472403 5 121 7.0 4.5 5.8 0.7 125 chr3R 18472278 intron fru - chr3R 18472340 intron fru - chr3R 18472403 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-21 1894 chr3R 18473226 18473245 chr3R 18473333 18473348 6 106 0.0 0.0 0.0 6.0 122 chr3R 18473226 intron fru - chr3R 18473287 intron fru - chr3R 18473348 intron fru - chr3R_6_18470001 chr3R_18470001 RAL-21 1895 chr3R 18501588 18501623 chr3R 18501689 18501722 11 98 3.0 4.5 3.8 2.3 134 chr3R 18501588 intron fru - chr3R 18501655 intron fru - chr3R 18501722 intron fru - chr3R_11_18500001 chr3R_18500001 RAL-21 1896 chr3R 18606487 18606523 chr3R 18610739 18610775 F-element 8 4250 3.0 7.0 5.0 1.3 4288 chr3R 18606487 intron,intron qin +,CG14304 - chr3R 18608631 intron,intron qin +,CG14304 - chr3R 18610775 intron,intron qin +,CG14304 - chr3R_8_18605001 chr3R_18605001 RAL-21 1897 chr3R 18606524 18606533 chr3R 18610737 18610785 F-element 5 4244 2.0 7.0 4.5 0.9 4261 chr3R 18606524 intron,intron qin +,CG14304 - chr3R 18608654 intron,intron qin +,CG14304 - chr3R 18610785 intron,intron qin +,CG14304 - chr3R_5_18605001 chr3R_18605001 RAL-21 1898 chr3R 18618251 18618292 chr3R 18618350 18618397 10 104 3.0 2.5 2.8 2.6 146 chr3R 18618251 intron,intron qin +,CG14304 - chr3R 18618324 intron,intron qin +,CG14304 - chr3R 18618397 intron,intron qin +,CG14304 - chr3R_10_18615001 chr3R_18615001 RAL-21 1899 chr3R 18628862 18629033 chr3R 18629001 18629143 7 124 0.5 0.5 0.5 4.7 281 chr3R 18628862 intron qin + chr3R 18629002 intron qin + chr3R 18629143 intron qin + chr3R_7_18625001 chr3R_18625001 RAL-21 1900 chr3R 18695746 18695763 chr3R 18695850 18695858 7 103 4.5 0.0 2.2 2.2 112 chr3R 18695746 3` UTR CG34282 + chr3R 18695802 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_7_18695001 chr3R_18695001 RAL-21 1901 chr3R 18730005 18730028 chr3R 18730101 18730124 5 94 1.5 0.5 1.0 2.5 119 chr3R 18730005 exon Cha + chr3R 18730064 intron Cha + chr3R 18730124 exon Cha + chr3R_5_18730001 chr3R_18730001 RAL-21 1902 chr3R 18781675 18781713 chr3R 18781771 18781809 5 94 4.0 1.5 2.8 1.3 134 chr3R 18781675 intron CG7720 - chr3R 18781742 intron CG7720 - chr3R 18781809 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-21 1903 chr3R 18782742 18782764 chr3R 18782856 18782878 8 114 5.0 4.0 4.5 1.5 136 chr3R 18782742 intron CG7720 - chr3R 18782810 intron CG7720 - chr3R 18782878 intron CG7720 - chr3R_8_18780001 chr3R_18780001 RAL-21 1904 chr3R 18807312 18807329 chr3R 18807408 18807424 4 96 2.5 0.0 1.2 1.8 112 chr3R 18807312 intron CG18208 - chr3R 18807368 intron CG18208 - chr3R 18807424 intron CG18208 - chr3R_4_18805001 chr3R_18805001 RAL-21 1905 chr3R 18812060 18812106 chr3R 18812158 18812204 12 98 3.5 5.0 4.2 2.3 144 chr3R 18812060 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812204 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-21 1906 chr3R 19012999 19013048 chr3R 19013103 19013152 14 100 3.0 1.0 2.0 4.7 153 chr3R 19012999 intron gukh + chr3R 19013076 intron gukh + chr3R 19013152 intron gukh + chr3R_14_19010001 chr3R_19010001 RAL-21 1907 chr3R 19014084 19014098 chr3R 19014184 19014198 5 100 3.0 3.0 3.0 1.2 114 chr3R 19014084 intron gukh + chr3R 19014141 intron gukh + chr3R 19014198 intron gukh + chr3R_5_19010001 chr3R_19010001 RAL-21 1908 chr3R 19014103 19014123 chr3R 19014176 19014189 5 76 1.0 1.5 1.2 2.3 86 chr3R 19014103 intron gukh + chr3R 19014146 intron gukh + chr3R 19014189 intron gukh + chr3R_5_19010001 chr3R_19010001 RAL-21 1909 chr3R 19117045 19117095 chr3R 19117209 19117214 5 153 1.0 0.0 0.5 3.3 169 chr3R 19117045 intron CG6040 + chr3R 19117130 intron CG6040 + chr3R 19117214 intron CG6040 + chr3R_5_19115001 chr3R_19115001 RAL-21 1910 chr3R 19159940 19159963 chr3R 19160045 19160068 10 105 6.0 3.0 4.5 1.8 128 chr3R 19159940 3` UTR nos + chr3R 19160004 3` UTR nos + chr3R 19160068 3` UTR nos + chr3R_10_19160001 chr3R_19160001 RAL-21 1911 chr3R 19165653 19165703 chr3R 19166023 19166071 7 368 1.5 3.5 2.5 2.0 418 chr3R 19165653 intron sqz + chr3R 19165862 intron sqz + chr3R 19166071 intron sqz + chr3R_7_19165001 chr3R_19165001 RAL-21 1912 chr3R 19207370 19207405 chr3R 19207475 19207476 13 104 4.0 4.0 4.0 2.6 106 chr3R 19207370 intergenic not near genes chr3R 19207423 intergenic not near genes chr3R 19207476 intergenic not near genes chr3R_13_19205001 chr3R_19205001 RAL-21 1913 chr3R 19276912 19276946 chr3R 19277012 19277046 10 100 4.5 1.5 3.0 2.5 134 chr3R 19276912 intergenic not near genes chr3R 19276979 intergenic not near genes chr3R 19277046 intergenic not near genes chr3R_10_19275001 chr3R_19275001 RAL-21 1914 chr3R 19340377 19340420 chr3R 19340474 19340517 8 95 2.0 4.0 3.0 2.0 140 chr3R 19340377 intergenic not near genes chr3R 19340447 intergenic not near genes chr3R 19340517 intergenic not near genes chr3R_8_19340001 chr3R_19340001 RAL-21 1915 chr3R 19343047 19343077 chr3R 19343229 19343259 4 182 4.5 2.0 3.2 1.0 212 chr3R 19343047 intergenic not near genes chr3R 19343153 intergenic not near genes chr3R 19343259 intergenic not near genes chr3R_4_19340001 chr3R_19340001 RAL-21 1916 chr3R 19344645 19344692 chr3R 19344800 19344847 6 155 3.0 3.5 3.2 1.4 202 chr3R 19344645 intergenic not near genes chr3R 19344746 intergenic not near genes chr3R 19344847 intergenic not near genes chr3R_6_19340001 chr3R_19340001 RAL-21 1917 chr3R 19348633 19348668 chr3R 19348732 19348767 14 99 2.0 0.0 1.0 7.0 134 chr3R 19348633 intergenic not near genes chr3R 19348700 intergenic not near genes chr3R 19348767 intergenic not near genes chr3R_14_19345001 chr3R_19345001 RAL-21 1918 chr3R 19369409 19369415 chr3R 19369503 19369521 5 104 1.5 4.0 2.8 1.3 112 chr3R 19369409 exon Ino80 - chr3R 19369465 intron Ino80 - chr3R 19369521 intron Ino80 - chr3R_5_19365001 chr3R_19365001 RAL-21 1919 chr3R 19418393 19418430 chr3R 19418505 19418542 14 112 5.0 0.5 2.8 3.7 149 chr3R 19418393 intron CG31221 + chr3R 19418468 intron CG31221 + chr3R 19418542 intron CG31221 + chr3R_14_19415001 chr3R_19415001 RAL-21 1920 chr3R 19517910 19517956 chr3R 19518091 19518111 7 176 4.5 4.5 4.5 1.3 201 chr3R 19517910 intron Dys + chr3R 19518010 intron Dys + chr3R 19518111 intron Dys + chr3R_7_19515001 chr3R_19515001 RAL-21 1921 chr3R 19520276 19520317 chr3R 19520372 19520424 7 97 4.5 5.0 4.8 1.2 148 chr3R 19520276 intron Dys + chr3R 19520350 intron Dys + chr3R 19520424 intron Dys + chr3R_7_19520001 chr3R_19520001 RAL-21 1922 chr3R 19602744 19602780 chr3R 19602842 19602878 16 98 7.5 2.5 5.0 2.7 134 chr3R 19602744 intergenic CG7333 + chr3R 19602811 intergenic CG7333 + chr3R 19602878 intergenic CG7333 +,CG7342 + chr3R_16_19600001 chr3R_19600001 RAL-21 1923 chr3R 19716217 19716234 chr3R 19716314 19716331 9 97 0.0 0.0 0.0 9.0 114 chr3R 19716217 intergenic CG34286 - chr3R 19716274 intergenic CG34286 - chr3R 19716331 intergenic CG34286 - chr3R_9_19715001 chr3R_19715001 RAL-21 1924 chr3R 19755407 19755448 chr3R 19755522 19755563 7 111 6.5 4.0 5.2 1.1 156 chr3R 19755407 intron GluClalpha + chr3R 19755485 intron GluClalpha + chr3R 19755563 intron GluClalpha + chr3R_7_19755001 chr3R_19755001 RAL-21 1925 chr3R 19830878 19830881 chr3R 19830970 19830978 4 96 0.0 4.5 2.2 1.2 100 chr3R 19830878 intron bnl - chr3R 19830928 intron bnl - chr3R 19830978 intron bnl - chr3R_4_19830001 chr3R_19830001 RAL-21 1926 chr3R 19839526 19839553 chr3R 19839778 19839805 9 250 3.5 5.0 4.2 1.7 279 chr3R 19839526 intergenic not near genes chr3R 19839666 intergenic not near genes chr3R 19839805 intergenic not near genes chr3R_9_19835001 chr3R_19835001 RAL-21 1927 chr3R 19846958 19846969 chr3R 19847120 19847127 6 169 5.5 2.0 3.8 1.2 169 chr3R 19846958 intergenic CG4662 + chr3R 19847042 intergenic CG4662 + chr3R 19847127 intergenic CG4662 + chr3R_6_19845001 chr3R_19845001 RAL-21 1928 chr3R 19946519 19946546 chr3R 19946618 19946645 5 99 3.0 2.0 2.5 1.4 126 chr3R 19946519 intron Hs6st - chr3R 19946582 intron Hs6st - chr3R 19946645 intron Hs6st - chr3R_5_19945001 chr3R_19945001 RAL-21 1929 chr3R 19946548 19946552 chr3R 19946606 19946651 7 85 1.0 1.0 1.0 3.5 103 chr3R 19946548 intron Hs6st - chr3R 19946600 intron Hs6st - chr3R 19946651 intron Hs6st - chr3R_7_19945001 chr3R_19945001 RAL-21 1930 chr3R 19956496 19956536 chr3R 19956606 19956646 14 110 5.5 4.5 5.0 2.3 150 chr3R 19956496 intron Hs6st - chr3R 19956571 intron Hs6st - chr3R 19956646 intron Hs6st - chr3R_14_19955001 chr3R_19955001 RAL-21 1931 chr3R 19982945 19982965 chr3R 19983049 19983069 8 103 2.5 2.5 2.5 2.3 124 chr3R 19982945 intron Hs6st - chr3R 19983007 intron Hs6st - chr3R 19983069 intron Hs6st - chr3R_8_19980001 chr3R_19980001 RAL-21 1932 chr3R 20109517 20109562 chr3R 20114743 20114788 copia 11 5224 3.0 4.5 3.8 2.3 5271 chr3R 20109517 intergenic not near genes chr3R 20112152 intergenic not near genes chr3R 20114788 intergenic CG10887 + chr3R_11_20110001 chr3R_20110001 RAL-21 1933 chr3R 20156679 20156717 chr3R 20165869 20165907 roo 13 9190 2.5 6.5 4.5 2.4 9228 chr3R 20156679 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165907 intergenic not near genes chr3R_13_20160001 chr3R_20160001 RAL-21 1934 chr3R 20205392 20205594 chr3R 20205522 20205736 17 136 0.5 0.5 0.5 11.3 344 chr3R 20205392 intron Nlg4 + chr3R 20205564 intron Nlg4 + chr3R 20205736 intron Nlg4 + chr3R_17_20205001 chr3R_20205001 RAL-21 1935 chr3R 20245269 20245298 chr3R 20248899 20248929 F-element 8 3631 4.5 1.0 2.8 2.1 3660 chr3R 20245269 3` UTR Nlg4 + chr3R 20247099 intergenic not near genes chr3R 20248929 intergenic not near genes chr3R_8_20245001 chr3R_20245001 RAL-21 1936 chr3R 20252225 20252252 chr3R 20252323 20252350 12 98 0.0 0.0 0.0 12.0 125 chr3R 20252225 intergenic not near genes chr3R 20252288 intergenic cic + chr3R 20252350 intergenic cic + chr3R_12_20250001 chr3R_20250001 RAL-21 1937 chr3R 20256854 20256871 chr3R 20256943 20256969 8 97 0.5 9.5 5.0 1.3 115 chr3R 20256854 intron cic + chr3R 20256912 intron cic + chr3R 20256969 intron cic + chr3R_8_20255001 chr3R_20255001 RAL-21 1938 chr3R 20266502 20266546 chr3R 20272993 20273037 Burdock 9 6491 4.5 8.5 6.5 1.2 6535 chr3R 20266502 intron cic + chr3R 20269770 intron cic + chr3R 20273037 intron cic + chr3R_9_20265001 chr3R_20265001 RAL-21 1939 chr3R 20282255 20282306 chr3R 20282351 20282402 16 95 1.0 1.0 1.0 8.0 147 chr3R 20282255 intron cic + chr3R 20282328 intron cic + chr3R 20282402 intron cic + chr3R_16_20280001 chr3R_20280001 RAL-21 1940 chr3R 20308963 20309012 chr3R 20309059 20309108 10 91 4.5 1.5 3.0 2.5 145 chr3R 20308963 intergenic CG42668 + chr3R 20309036 intergenic CG42668 + chr3R 20309108 intergenic CG42668 + chr3R_10_20305001 chr3R_20305001 RAL-21 1941 chr3R 20330968 20331013 chr3R 20331797 20331840 roo 15 829 1.0 0.5 0.8 8.3 872 chr3R 20330968 intergenic Sirt2 + chr3R 20331404 intergenic Sirt2 + chr3R 20331840 intergenic not near genes chr3R_15_20330001 chr3R_20330001 RAL-21 1942 chr3R 20375843 20375873 chr3R 20375935 20375977 15 104 2.0 2.0 2.0 5.0 134 chr3R 20375843 intergenic not near genes chr3R 20375910 intergenic not near genes chr3R 20375977 intergenic not near genes chr3R_15_20375001 chr3R_20375001 RAL-21 1943 chr3R 20472141 20472186 chr3R 20472241 20472282 4 89 1.0 3.0 2.0 1.3 141 chr3R 20472141 intron Gfrl - chr3R 20472212 intron Gfrl - chr3R 20472282 intron Gfrl - chr3R_4_20470001 chr3R_20470001 RAL-21 1944 chr3R 20512986 20513030 chr3R 20515709 20515753 opus 16 2721 4.5 4.0 4.2 3.1 2767 chr3R 20512986 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515753 intergenic not near genes chr3R_16_20510001 chr3R_20510001 RAL-21 1945 chr3R 20594465 20594512 chr3R 20594575 20594621 6 109 3.5 0.0 1.8 2.1 156 chr3R 20594465 intron bon + chr3R 20594543 intron bon + chr3R 20594621 intron bon + chr3R_6_20590001 chr3R_20590001 RAL-21 1946 chr3R 20596175 20596209 chr3R 20596282 20596316 8 107 7.0 3.5 5.2 1.3 141 chr3R 20596175 intron bon + chr3R 20596246 intron bon + chr3R 20596316 intron bon + chr3R_8_20595001 chr3R_20595001 RAL-21 1947 chr3R 20669907 20669949 chr3R 20670018 20670060 11 110 5.5 3.0 4.2 2.1 153 chr3R 20669907 intron Cpr92F + chr3R 20669984 intron Cpr92F + chr3R 20670060 intron Cpr92F + chr3R_11_20665001 chr3R_20665001 RAL-21 1948 chr3R 20722842 20722866 chr3R 20722988 20722991 4 138 3.0 0.5 1.8 1.4 149 chr3R 20722842 intergenic not near genes chr3R 20722916 intergenic not near genes chr3R 20722991 intergenic not near genes chr3R_4_20720001 chr3R_20720001 RAL-21 1949 chr3R 20730928 20730955 chr3R 20731039 20731053 9 108 5.5 0.5 3.0 2.2 125 chr3R 20730928 intergenic not near genes chr3R 20730990 intergenic not near genes chr3R 20731053 intergenic not near genes chr3R_9_20730001 chr3R_20730001 RAL-21 1950 chr3R 20767514 20767536 chr3R 20767598 20767629 6 106 5.0 2.0 3.5 1.3 115 chr3R 20767514 intron Syp + chr3R 20767572 intron Syp + chr3R 20767629 intron Syp + chr3R_6_20765001 chr3R_20765001 RAL-21 1951 chr3R 20771705 20771727 chr3R 20771800 20771828 10 98 1.0 3.5 2.2 3.1 123 chr3R 20771705 intron,intron Syp +,Takl1 - chr3R 20771766 intron,intron Syp +,Takl1 - chr3R 20771828 intron,exon Syp +,Takl1 - chr3R_10_20770001 chr3R_20770001 RAL-21 1952 chr3R 20787423 20787453 chr3R 20787529 20787564 5 105 2.5 4.0 3.2 1.2 141 chr3R 20787423 intron Syp + chr3R 20787494 intron Syp + chr3R 20787564 intron Syp + chr3R_5_20785001 chr3R_20785001 RAL-21 1953 chr3R 20870034 20870045 chr3R 20872687 20872704 6 2658 7.5 5.5 6.5 0.8 2670 chr3R 20870034 intergenic not near genes chr3R 20871369 exon TotA + chr3R 20872704 intergenic TotC + chr3R_6_20870001 chr3R_20870001 RAL-21 1954 chr3R 20953349 20953373 chr3R 20953514 20953538 6 163 5.0 1.0 3.0 1.5 189 chr3R 20953349 intron Atpalpha + chr3R 20953444 intron Atpalpha + chr3R 20953538 intron Atpalpha + chr3R_6_20950001 chr3R_20950001 RAL-21 1955 chr3R 21015262 21015295 chr3R 21015353 21015402 8 105 3.0 5.0 4.0 1.6 140 chr3R 21015262 3` UTR Calx + chr3R 21015332 3` UTR Calx + chr3R 21015402 3` UTR Calx + chr3R_8_21015001 chr3R_21015001 RAL-21 1956 chr3R 21108018 21108059 chr3R 21108299 21108340 10 281 2.5 2.5 2.5 2.9 322 chr3R 21108018 intergenic Sec15 -,rtet + chr3R 21108179 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_10_21105001 chr3R_21105001 RAL-21 1957 chr3R 21132612 21132649 chr3R 21132715 21132752 6 103 3.0 0.0 1.5 2.4 140 chr3R 21132612 3` UTR Ice2 + chr3R 21132682 3` UTR Ice2 + chr3R 21132752 3` UTR CG7009 - chr3R_6_21130001 chr3R_21130001 RAL-21 1958 chr3R 21154557 21154587 chr3R 21154790 21154815 5 233 2.0 2.5 2.2 1.6 258 chr3R 21154557 intron SNF4Agamma + chr3R 21154686 intron SNF4Agamma + chr3R 21154815 intron SNF4Agamma + chr3R_5_21150001 chr3R_21150001 RAL-21 1959 chr3R 21189673 21189719 chr3R 21189770 21189817 7 95 6.5 3.0 4.8 1.2 144 chr3R 21189673 intron SNF4Agamma + chr3R 21189745 intron SNF4Agamma + chr3R 21189817 intron SNF4Agamma + chr3R_7_21185001 chr3R_21185001 RAL-21 1960 chr3R 21214725 21214749 chr3R 21214917 21214940 9 192 5.5 2.0 3.8 1.9 215 chr3R 21214725 intergenic CG5862 + chr3R 21214832 intergenic CG5862 + chr3R 21214940 intergenic CG5862 + chr3R_9_21210001 chr3R_21210001 RAL-21 1961 chr3R 21239785 21239959 chr3R 21239899 21240055 15 99 0.5 0.0 0.2 12.5 270 chr3R 21239785 intergenic not near genes chr3R 21239920 intergenic not near genes chr3R 21240055 intergenic not near genes chr3R_15_21235001 chr3R_21235001 RAL-21 1962 chr3R 21265471 21265513 chr3R 21265725 21265767 6 254 0.0 5.0 2.5 1.7 296 chr3R 21265471 intergenic ETHR + chr3R 21265619 intergenic Rab1 -,ETHR + chr3R 21265767 intergenic Rab1 - chr3R_6_21265001 chr3R_21265001 RAL-21 1963 chr3R 21464384 21464425 chr3R 21464490 21464529 8 103 2.5 0.5 1.5 3.2 145 chr3R 21464384 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464529 intergenic not near genes chr3R_8_21460001 chr3R_21460001 RAL-21 1964 chr3R 21471995 21472034 chr3R 21472096 21472134 12 98 1.5 3.5 2.5 3.4 139 chr3R 21471995 intergenic not near genes chr3R 21472064 intergenic not near genes chr3R 21472134 intergenic not near genes chr3R_12_21470001 chr3R_21470001 RAL-21 1965 chr3R 21506856 21506913 chr3R 21506962 21507013 12 104 0.0 3.0 1.5 4.8 157 chr3R 21506856 intron C15 + chr3R 21506934 intron C15 + chr3R 21507013 intron C15 + chr3R_12_21505001 chr3R_21505001 RAL-21 1966 chr3R 21519971 21520131 chr3R 21520092 21520245 30 118 3.0 3.0 3.0 7.5 274 chr3R 21519971 intergenic not near genes chr3R 21520108 intergenic not near genes chr3R 21520245 intergenic not near genes chr3R_30_21520001 chr3R_21520001 RAL-21 1967 chr3R 21624086 21624119 chr3R 21624200 21624233 8 114 2.0 1.0 1.5 3.2 147 chr3R 21624086 intron E2f - chr3R 21624160 intron E2f - chr3R 21624233 intron E2f - chr3R_8_21620001 chr3R_21620001 RAL-21 1968 chr3R 21651223 21651268 chr3R 21651321 21651366 10 98 1.5 2.5 2.0 3.3 143 chr3R 21651223 intron E2f - chr3R 21651294 intron E2f - chr3R 21651366 intron E2f - chr3R_10_21650001 chr3R_21650001 RAL-21 1969 chr3R 21685920 21685960 chr3R 21686017 21686047 10 96 3.5 3.5 3.5 2.2 127 chr3R 21685920 intron CG31176 - chr3R 21685984 intron CG31176 - chr3R 21686047 intron CG31176 - chr3R_10_21685001 chr3R_21685001 RAL-21 1970 chr3R 21725672 21725690 chr3R 21725828 21725846 6 155 0.0 7.0 3.5 1.3 174 chr3R 21725672 intergenic not near genes chr3R 21725759 intergenic not near genes chr3R 21725846 intergenic not near genes chr3R_6_21725001 chr3R_21725001 RAL-21 1971 chr3R 21761137 21761153 chr3R 21768527 21768557 mdg1 5 7399 1.0 6.0 3.5 1.1 7420 chr3R 21761137 exon CG42335 + chr3R 21764847 intron CG42335 + chr3R 21768557 exon CG42335 + chr3R_5_21760001 chr3R_21760001 RAL-21 1972 chr3R 21845875 21845921 chr3R 21846065 21846112 7 189 3.0 3.5 3.2 1.7 237 chr3R 21845875 5` UTR,exon CR44087 +,Gr93d - chr3R 21845994 intron,exon CR44087 +,Gr93d - chr3R 21846112 5` UTR,exon CR44087 +,Gr93d - chr3R_7_21845001 chr3R_21845001 RAL-21 1973 chr3R 21907535 21907535 chr3R 28831801 28831802 17 6924266 9.0 6.5 7.8 1.9 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_17_25365001 chr3R_25365001 RAL-21 1974 chr3R 21907536 21907536 chr3R 28831801 28831802 14 6924266 9.0 6.5 7.8 1.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-21 1975 chr3R 21937209 21937229 chr3R 21937306 21937326 12 95 4.0 5.0 4.5 2.2 117 chr3R 21937209 intergenic not near genes chr3R 21937268 intergenic not near genes chr3R 21937326 intergenic not near genes chr3R_12_21935001 chr3R_21935001 RAL-21 1976 chr3R 21985217 21985262 chr3R 21985342 21985376 11 123 5.0 3.0 4.0 2.2 159 chr3R 21985217 intron Eip93F + chr3R 21985296 intron Eip93F + chr3R 21985376 intron Eip93F + chr3R_11_21985001 chr3R_21985001 RAL-21 1977 chr3R 22084608 22084622 chr3R 22084712 22084724 6 106 0.0 6.5 3.2 1.4 116 chr3R 22084608 intergenic not near genes chr3R 22084666 intergenic not near genes chr3R 22084724 intergenic not near genes chr3R_6_22080001 chr3R_22080001 RAL-21 1978 chr3R 22239477 22239522 chr3R 22248556 22248590 roo 8 9074 3.5 1.5 2.5 2.3 9113 chr3R 22239477 intron SKIP + chr3R 22244034 intron SKIP + chr3R 22248590 intron SKIP + chr3R_8_22240001 chr3R_22240001 RAL-21 1979 chr3R 22302334 22302378 chr3R 22302440 22302478 5 105 2.5 1.5 2.0 1.7 144 chr3R 22302334 intron CG7084 + chr3R 22302406 intron CG7084 + chr3R 22302478 intron CG7084 + chr3R_5_22300001 chr3R_22300001 RAL-21 1980 chr3R 22310570 22310597 chr3R 22310683 22310710 4 113 2.5 3.0 2.8 1.1 140 chr3R 22310570 3` UTR CG34377 - chr3R 22310640 3` UTR CG34377 - chr3R 22310710 3` UTR CG34377 - chr3R_4_22310001 chr3R_22310001 RAL-21 1981 chr3R 22450540 22450572 chr3R 22453182 22453209 NOF 7 2649 3.0 4.5 3.8 1.5 2669 chr3R 22450540 intron CG34376 + chr3R 22451874 intron CG34376 + chr3R 22453209 intron CG34376 + chr3R_7_22450001 chr3R_22450001 RAL-21 1982 chr3R 22538436 22538474 chr3R 22538526 22538574 14 103 0.0 3.5 1.8 5.0 138 chr3R 22538436 intron CG5326 - chr3R 22538505 intron CG5326 - chr3R 22538574 intron CG5326 - chr3R_14_22535001 chr3R_22535001 RAL-21 1983 chr3R 22632855 22632904 chr3R 22632965 22633014 10 109 2.5 1.0 1.8 3.6 159 chr3R 22632855 intron loco - chr3R 22632934 intron loco - chr3R 22633014 intron loco - chr3R_10_22630001 chr3R_22630001 RAL-21 1984 chr3R 22675161 22675211 chr3R 22675287 22675337 14 124 2.0 3.0 2.5 4.0 176 chr3R 22675161 intron wake + chr3R 22675249 intron wake + chr3R 22675337 intron wake + chr3R_14_22675001 chr3R_22675001 RAL-21 1985 chr3R 22818112 22818131 chr3R 22818187 22818225 4 77 1.0 1.5 1.2 1.8 113 chr3R 22818112 intergenic not near genes chr3R 22818168 intergenic not near genes chr3R 22818225 intergenic not near genes chr3R_4_22815001 chr3R_22815001 RAL-21 1986 chr3R 22842377 22842419 chr3R 22842489 22842538 7 118 2.0 2.0 2.0 2.3 161 chr3R 22842377 intergenic not near genes chr3R 22842458 intergenic not near genes chr3R 22842538 intergenic not near genes chr3R_7_22840001 chr3R_22840001 RAL-21 1987 chr3R 22860138 22860162 chr3R 22860250 22860274 8 109 1.0 1.0 1.0 4.0 136 chr3R 22860138 intergenic not near genes chr3R 22860206 intergenic not near genes chr3R 22860274 intergenic not near genes chr3R_8_22860001 chr3R_22860001 RAL-21 1988 chr3R 22877283 22877326 chr3R 22877431 22877461 5 142 2.0 2.5 2.2 1.6 178 chr3R 22877283 intergenic not near genes chr3R 22877372 intergenic not near genes chr3R 22877461 intergenic not near genes chr3R_5_22875001 chr3R_22875001 RAL-21 1989 chr3R 22880916 22880960 chr3R 22881074 22881118 17 157 2.0 3.5 2.8 4.5 202 chr3R 22880916 intergenic not near genes chr3R 22881017 intergenic not near genes chr3R 22881118 intergenic not near genes chr3R_17_22880001 chr3R_22880001 RAL-21 1990 chr3R 22881183 22881225 chr3R 22884909 22884950 Doc 4 3726 3.5 2.0 2.8 1.1 3767 chr3R 22881183 intergenic not near genes chr3R 22883066 intergenic not near genes chr3R 22884950 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-21 1991 chr3R 22953836 22953861 chr3R 22954484 22954511 5 656 0.5 0.0 0.2 4.2 675 chr3R 22953836 intron klg + chr3R 22954174 intron klg + chr3R 22954511 intron klg + chr3R_5_22950001 chr3R_22950001 RAL-21 1992 chr3R 23070638 23070699 chr3R 23070738 23070797 7 99 0.0 0.0 0.0 7.0 159 chr3R 23070638 3` UTR CG13830 - chr3R 23070718 3` UTR CG13830 - chr3R 23070797 3` UTR CG13830 - chr3R_7_23070001 chr3R_23070001 RAL-21 1993 chr3R 23181085 23181106 chr3R 23181189 23181210 9 104 0.0 5.5 2.8 2.4 125 chr3R 23181085 intron Irk1 + chr3R 23181148 intron Irk1 + chr3R 23181210 intron Irk1 + chr3R_9_23180001 chr3R_23180001 RAL-21 1994 chr3R 23182664 23182692 chr3R 23182767 23182795 12 100 3.0 2.5 2.8 3.2 131 chr3R 23182664 intron Irk1 + chr3R 23182730 intron Irk1 + chr3R 23182795 intron Irk1 + chr3R_12_23180001 chr3R_23180001 RAL-21 1995 chr3R 23229036 23229089 chr3R 23229132 23229185 16 94 2.0 3.0 2.5 4.6 149 chr3R 23229036 3` UTR CG4467 - chr3R 23229110 3` UTR CG4467 - chr3R 23229185 3` UTR CG4467 - chr3R_16_23225001 chr3R_23225001 RAL-21 1996 chr3R 23261218 23261251 chr3R 23261345 23261380 8 128 3.5 7.5 5.5 1.2 162 chr3R 23261218 3` UTR orb - chr3R 23261299 3` UTR orb - chr3R 23261380 3` UTR orb - chr3R_8_23260001 chr3R_23260001 RAL-21 1997 chr3R 23324005 23324056 chr3R 23324111 23324162 20 106 2.0 3.0 2.5 5.7 157 chr3R 23324005 intron pnt - chr3R 23324084 intron pnt - chr3R 23324162 intron pnt - chr3R_20_23320001 chr3R_23320001 RAL-21 1998 chr3R 23476087 23476124 chr3R 23476185 23476222 4 94 1.0 2.0 1.5 1.6 135 chr3R 23476087 intergenic not near genes chr3R 23476154 intergenic not near genes chr3R 23476222 intergenic not near genes chr3R_4_23475001 chr3R_23475001 RAL-21 1999 chr3R 23498513 23498558 chr3R 23498833 23498878 6 324 19.0 14.0 16.5 0.3 365 chr3R 23498513 intergenic not near genes chr3R 23498696 intergenic not near genes chr3R 23498878 intergenic not near genes chr3R_6_23495001 chr3R_23495001 RAL-21 2000 chr3R 23558378 23558420 chr3R 23560179 23560218 Bari1 17 1798 3.0 3.5 3.2 4.0 1840 chr3R 23558378 intron beat-IV + chr3R 23559298 intron beat-IV + chr3R 23560218 intron beat-IV + chr3R_17_23555001 chr3R_23555001 RAL-21 2001 chr3R 23589867 23589910 chr3R 23590296 23590337 11 429 4.5 5.5 5.0 1.8 470 chr3R 23589867 intergenic CG10182 -,CG33337 - chr3R 23590102 intergenic CG33337 -,CG10182 - chr3R 23590337 exon CG33337 - chr3R_11_23590001 chr3R_23590001 RAL-21 2002 chr3R 23626120 23626151 chr3R 23626232 23626261 8 113 2.5 1.5 2.0 2.7 141 chr3R 23626120 intron CG31145 - chr3R 23626190 intron CG31145 - chr3R 23626261 intron CG31145 - chr3R_8_23625001 chr3R_23625001 RAL-21 2003 chr3R 23629808 23629847 chr3R 23629907 23629934 9 94 2.5 4.0 3.2 2.1 126 chr3R 23629808 intron CG31145 - chr3R 23629871 intron CG31145 - chr3R 23629934 intron CG31145 - chr3R_9_23625001 chr3R_23625001 RAL-21 2004 chr3R 23629848 23629851 chr3R 23629898 23629950 6 84 3.0 3.0 3.0 1.5 102 chr3R 23629848 intron CG31145 - chr3R 23629899 intron CG31145 - chr3R 23629950 intron CG31145 - chr3R_6_23625001 chr3R_23625001 RAL-21 2005 chr3R 23738476 23738495 chr3R 23738572 23738603 7 106 2.5 3.0 2.8 1.8 127 chr3R 23738476 intron Hmgcr + chr3R 23738540 intron Hmgcr + chr3R 23738603 intron Hmgcr + chr3R_7_23735001 chr3R_23735001 RAL-21 2006 chr3R 23790118 23790123 chr3R 23790243 23790248 5 125 8.0 4.5 6.2 0.7 130 chr3R 23790118 intron mbc + chr3R 23790183 intron mbc + chr3R 23790248 intron mbc + chr3R_5_23790001 chr3R_23790001 RAL-21 2007 chr3R 23790124 23790166 chr3R 23790241 23790285 20 121 1.5 4.5 3.0 5.0 161 chr3R 23790124 intron mbc + chr3R 23790204 intron mbc + chr3R 23790285 intron mbc + chr3R_20_23790001 chr3R_23790001 RAL-21 2008 chr3R 23801561 23801586 chr3R 23801669 23801692 6 108 4.5 0.0 2.2 1.9 131 chr3R 23801561 3` UTR mbc + chr3R 23801626 3` UTR mbc + chr3R 23801692 intergenic CG33111 -,mbc + chr3R_6_23800001 chr3R_23800001 RAL-21 2009 chr3R 23808460 23808502 chr3R 23808605 23808647 10 141 6.0 3.0 4.5 1.8 187 chr3R 23808460 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808554 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808647 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_10_23805001 chr3R_23805001 RAL-21 2010 chr3R 23851067 23851086 chr3R 23858754 23858773 opus 11 7687 2.5 9.5 6.0 1.6 7706 chr3R 23851067 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858773 intergenic not near genes chr3R_11_23850001 chr3R_23850001 RAL-21 2011 chr3R 23944890 23944936 chr3R 23944995 23945041 14 104 4.0 1.0 2.5 4.0 151 chr3R 23944890 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945041 exon CG12268 - chr3R_14_23940001 chr3R_23940001 RAL-21 2012 chr3R 24011648 24011679 chr3R 24011751 24011782 5 103 1.0 3.5 2.2 1.6 134 chr3R 24011648 intron KrT95D - chr3R 24011715 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_5_24010001 chr3R_24010001 RAL-21 2013 chr3R 24024982 24025006 chr3R 24025084 24025118 4 110 2.0 5.0 3.5 0.9 136 chr3R 24024982 intron KrT95D - chr3R 24025050 intron KrT95D - chr3R 24025118 intron KrT95D - chr3R_4_24025001 chr3R_24025001 RAL-21 2014 chr3R 24072071 24072116 chr3R 24072527 24072570 jockey 5 449 4.0 1.5 2.8 1.3 499 chr3R 24072071 intron 4EHP - chr3R 24072320 intron 4EHP - chr3R 24072570 intron 4EHP - chr3R_5_24070001 chr3R_24070001 RAL-21 2015 chr3R 24076900 24076943 chr3R 24078387 24078420 hobo 10 1485 3.5 3.0 3.2 2.4 1520 chr3R 24076900 intron 4EHP - chr3R 24077660 intron 4EHP - chr3R 24078420 intron 4EHP - chr3R_10_24075001 chr3R_24075001 RAL-21 2016 chr3R 24100439 24100609 chr3R 24100554 24100853 21 181 0.0 0.0 0.0 21.0 414 chr3R 24100439 intron 4EHP - chr3R 24100646 intron 4EHP - chr3R 24100853 intron 4EHP - chr3R_21_24100001 chr3R_24100001 RAL-21 2017 chr3R 24199729 24199773 chr3R 24199829 24199873 7 95 3.5 2.5 3.0 1.8 144 chr3R 24199729 intron twin - chr3R 24199801 intron twin - chr3R 24199873 intron twin - chr3R_7_24195001 chr3R_24195001 RAL-21 2018 chr3R 24207200 24207235 chr3R 24212296 24212330 flea 4 5093 6.5 4.5 5.5 0.6 5130 chr3R 24207200 intron twin - chr3R 24209765 intron twin - chr3R 24212330 intron twin - chr3R_4_24205001 chr3R_24205001 RAL-21 2019 chr3R 24303994 24304033 chr3R 24304094 24304133 7 99 4.5 0.5 2.5 2.0 139 chr3R 24303994 intron crb + chr3R 24304064 intron crb + chr3R 24304133 intron crb + chr3R_7_24300001 chr3R_24300001 RAL-21 2020 chr3R 24366438 24366461 chr3R 24366935 24366953 5 495 31.0 28.5 29.8 0.2 515 chr3R 24366438 intergenic CG42811 -,CG13613 + chr3R 24366696 intron CG42811 - chr3R 24366953 exon CG42811 - chr3R_5_24365001 chr3R_24365001 RAL-21 2021 chr3R 24366437 24366488 chr3R 24366956 24366979 5 498 33.5 24.0 28.8 0.2 542 chr3R 24366437 intergenic CG13613 +,CG42811 - chr3R 24366708 intron CG42811 - chr3R 24366979 exon CG42811 - chr3R_5_24365001 chr3R_24365001 RAL-21 2022 chr3R 24366341 24366394 chr3R 24369496 24369538 12 3147 26.5 27.5 27.0 0.4 3197 chr3R 24366341 exon CG13613 + chr3R 24367940 exon CG42812 - chr3R 24369538 intergenic CG13614 +,CG33341 + chr3R_12_24365001 chr3R_24365001 RAL-21 2023 chr3R 24431581 24431626 chr3R 24431680 24431725 9 99 3.0 0.0 1.5 3.6 144 chr3R 24431581 intron nAChRalpha1 - chr3R 24431653 intron nAChRalpha1 - chr3R 24431725 intron nAChRalpha1 - chr3R_9_24430001 chr3R_24430001 RAL-21 2024 chr3R 24434225 24434248 chr3R 24434323 24434341 4 95 8.0 4.0 6.0 0.6 116 chr3R 24434225 intron nAChRalpha1 - chr3R 24434283 intron nAChRalpha1 - chr3R 24434341 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-21 2025 chr3R 24493260 24493299 chr3R 24493508 24493548 BS 14 248 7.5 3.0 5.2 2.3 288 chr3R 24493260 intergenic not near genes chr3R 24493404 intergenic not near genes chr3R 24493548 intergenic not near genes chr3R_14_24490001 chr3R_24490001 RAL-21 2026 chr3R 24527784 24527827 chr3R 24527895 24527938 15 111 4.5 1.5 3.0 3.8 154 chr3R 24527784 intergenic CG13618 +,CG6607 + chr3R 24527861 intergenic CG6607 +,CG13618 + chr3R 24527938 intergenic CG6607 +,CG13618 + chr3R_15_24525001 chr3R_24525001 RAL-21 2027 chr3R 24667587 24667627 chr3R 24667684 24667689 12 94 1.5 0.0 0.8 6.7 102 chr3R 24667587 intron slo + chr3R 24667638 intron slo + chr3R 24667689 intron slo + chr3R_12_24665001 chr3R_24665001 RAL-21 2028 chr3R 24670034 24670192 chr3R 24670164 24670297 15 118 0.0 0.0 0.0 15.0 263 chr3R 24670034 intron slo + chr3R 24670166 intron slo + chr3R 24670297 intron slo + chr3R_15_24670001 chr3R_24670001 RAL-21 2029 chr3R 24730072 24730098 chr3R 24732470 24732496 Doc 4 2396 7.0 1.0 4.0 0.8 2424 chr3R 24730072 intron tok + chr3R 24731284 intron tok + chr3R 24732496 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-21 2030 chr3R 24736201 24736224 chr3R 24736305 24736328 6 104 4.5 2.0 3.2 1.4 127 chr3R 24736201 intron tok + chr3R 24736264 intron tok + chr3R 24736328 intron tok + chr3R_6_24735001 chr3R_24735001 RAL-21 2031 chr3R 24842103 24842134 chr3R 24842206 24842239 8 105 0.5 4.0 2.2 2.5 136 chr3R 24842103 5` UTR Esp + chr3R 24842171 5` UTR Esp + chr3R 24842239 5` UTR Esp + chr3R_8_24840001 chr3R_24840001 RAL-21 2032 chr3R 24845982 24846025 chr3R 24846082 24846111 10 105 2.5 3.0 2.8 2.6 129 chr3R 24845982 intron Esp + chr3R 24846046 intron Esp + chr3R 24846111 intron Esp + chr3R_10_24845001 chr3R_24845001 RAL-21 2033 chr3R 24927111 24927133 chr3R 24931922 24931941 Doc 8 4810 4.5 1.0 2.8 2.1 4830 chr3R 24927111 intergenic Trf4-2 + chr3R 24929526 intergenic not near genes chr3R 24931941 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-21 2034 chr3R 24927134 24927151 chr3R 24931915 24931959 Doc 6 4800 2.0 1.0 1.5 2.4 4825 chr3R 24927134 intergenic Trf4-2 + chr3R 24929546 intergenic not near genes chr3R 24931959 intergenic CG11771 + chr3R_6_24925001 chr3R_24925001 RAL-21 2035 chr3R 25004890 25004918 chr3R 25004982 25005021 8 99 4.0 2.0 3.0 2.0 131 chr3R 25004890 intron tnc + chr3R 25004956 intron tnc + chr3R 25005021 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-21 2036 chr3R 25072742 25072786 chr3R 25072854 25072860 14 109 3.5 6.0 4.8 2.4 118 chr3R 25072742 3` UTR CG9996 - chr3R 25072801 3` UTR CG9996 - chr3R 25072860 3` UTR CG9996 - chr3R_14_25070001 chr3R_25070001 RAL-21 2037 chr3R 25235797 25235836 chr3R 25235897 25235936 9 100 6.0 2.5 4.2 1.7 139 chr3R 25235797 intergenic CG10420 - chr3R 25235866 intergenic CG10420 - chr3R 25235936 intergenic CG10420 - chr3R_9_25235001 chr3R_25235001 RAL-21 2038 chr3R 25241781 25241831 chr3R 25241888 25241917 7 98 2.0 1.5 1.8 2.5 136 chr3R 25241781 intergenic to +,CG11854 + chr3R 25241849 intergenic CG11854 +,to + chr3R 25241917 intergenic CG11854 +,to + chr3R_7_25240001 chr3R_25240001 RAL-21 2039 chr3R 25302133 25302175 chr3R 25302329 25302373 10 198 29.5 27.5 28.5 0.3 240 chr3R 25302133 exon CG13659 + chr3R 25302253 exon CG13659 + chr3R 25302373 intergenic CG13659 +,CG31370 + chr3R_10_25300001 chr3R_25300001 RAL-21 2040 chr3R 25411769 25411806 chr3R 25411885 25411928 10 122 0.0 2.5 1.2 4.5 159 chr3R 25411769 intron Fur1 - chr3R 25411848 intron Fur1 - chr3R 25411928 intron Fur1 - chr3R_10_25410001 chr3R_25410001 RAL-21 2041 chr3R 25483313 25483358 chr3R 25483541 25483560 10 224 3.5 0.5 2.0 3.3 247 chr3R 25483313 intron,5` UTR CG42488 +,CG5116 + chr3R 25483436 exon,5` UTR CG42488 +,CG5116 + chr3R 25483560 3` UTR,5` UTR CG42488 +,CG5116 + chr3R_10_25480001 chr3R_25480001 RAL-21 2042 chr3R 25514423 25514449 chr3R 25514524 25514550 9 101 0.5 2.0 1.2 4.1 127 chr3R 25514423 intergenic not near genes chr3R 25514486 intergenic not near genes chr3R 25514550 intergenic not near genes chr3R_9_25510001 chr3R_25510001 RAL-21 2043 chr3R 25522484 25522511 chr3R 25522576 25522614 4 92 3.5 1.0 2.2 1.2 130 chr3R 25522484 intron msi + chr3R 25522549 intron msi + chr3R 25522614 intron msi + chr3R_4_25520001 chr3R_25520001 RAL-21 2044 chr3R 7773344 7773344 chr3R 25538123 25538124 4 17764780 17.0 10.0 13.5 0.3 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_4_16655001 chr3R_16655001 RAL-21 2045 chr3R 25588060 25588100 chr3R 25588158 25588170 7 91 1.5 1.5 1.5 2.8 110 chr3R 25588060 intron msi + chr3R 25588115 intron msi + chr3R 25588170 intron msi + chr3R_7_25585001 chr3R_25585001 RAL-21 2046 chr3R 25608450 25608496 chr3R 25608562 25608617 8 113 2.0 0.0 1.0 4.0 167 chr3R 25608450 intron ymp - chr3R 25608534 intron ymp - chr3R 25608617 intron ymp - chr3R_8_25605001 chr3R_25605001 RAL-21 2047 chr3R 25612899 25612943 chr3R 25612990 25613040 12 94 2.5 1.0 1.8 4.3 141 chr3R 25612899 intron Npl4 - chr3R 25612970 intron Npl4 - chr3R 25613040 intron Npl4 - chr3R_12_25610001 chr3R_25610001 RAL-21 2048 chr3R 25725807 25725859 chr3R 25734987 25735039 roo 16 9180 3.5 4.0 3.8 3.3 9232 chr3R 25725807 intron LpR2 - chr3R 25730423 intron LpR2 - chr3R 25735039 intron LpR2 - chr3R_16_25730001 chr3R_25730001 RAL-21 2049 chr3R 25762923 25762972 chr3R 25763032 25763081 22 107 2.5 3.5 3.0 5.5 158 chr3R 25762923 5` UTR LpR1 - chr3R 25763002 5` UTR LpR1 - chr3R 25763081 5` UTR LpR1 - chr3R_22_25760001 chr3R_25760001 RAL-21 2050 chr3R 25781997 25782034 chr3R 25782093 25782130 4 96 2.0 2.5 2.2 1.2 133 chr3R 25781997 intergenic not near genes chr3R 25782064 intergenic not near genes chr3R 25782130 intergenic not near genes chr3R_4_25780001 chr3R_25780001 RAL-21 2051 chr3R 25843621 25843665 chr3R 25843771 25843815 10 149 3.5 6.0 4.8 1.7 194 chr3R 25843621 intergenic CR45653 + chr3R 25843718 intergenic CR45653 + chr3R 25843815 intergenic CR45653 + chr3R_10_25840001 chr3R_25840001 RAL-21 2052 chr3R 25982064 25982084 chr3R 25982170 25982177 6 104 7.0 4.5 5.8 0.9 113 chr3R 25982064 3` UTR CG42261 + chr3R 25982120 3` UTR CG42261 + chr3R 25982177 3` UTR CG42261 + chr3R_6_25980001 chr3R_25980001 RAL-21 2053 chr3R 25982093 25982104 chr3R 25982165 25982210 4 98 4.0 4.0 4.0 0.8 117 chr3R 25982093 3` UTR CG42261 + chr3R 25982152 3` UTR CG42261 + chr3R 25982210 3` UTR CG42261 + chr3R_4_25980001 chr3R_25980001 RAL-21 2054 chr3R 25983685 25983721 chr3R 25983798 25983825 6 111 1.5 2.0 1.8 2.1 140 chr3R 25983685 exon Nf1 + chr3R 25983755 intron Nf1 + chr3R 25983825 intron Nf1 + chr3R_6_25980001 chr3R_25980001 RAL-21 2055 chr3R 26010165 26010207 chr3R 26010251 26010290 11 92 3.5 4.0 3.8 2.3 125 chr3R 26010165 intergenic not near genes chr3R 26010228 intergenic not near genes chr3R 26010290 intergenic not near genes chr3R_11_26010001 chr3R_26010001 RAL-21 2056 chr3R 26093851 26093866 chr3R 26093927 26093954 4 83 0.5 3.5 2.0 1.3 103 chr3R 26093851 intron dys - chr3R 26093902 intron dys - chr3R 26093954 intron dys - chr3R_4_26090001 chr3R_26090001 RAL-21 2057 chr3R 26121927 26121976 chr3R 26122044 26122081 8 114 2.5 2.5 2.5 2.3 154 chr3R 26121927 intron CG31324 + chr3R 26122004 intron CG31324 + chr3R 26122081 intron CG31324 + chr3R_8_26120001 chr3R_26120001 RAL-21 2058 chr3R 26122448 26122477 chr3R 26122540 26122573 8 92 2.5 3.0 2.8 2.1 125 chr3R 26122448 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122573 intron CG31324 + chr3R_8_26120001 chr3R_26120001 RAL-21 2059 chr3R 26126530 26126570 chr3R 26126636 26126676 8 105 2.5 7.5 5.0 1.3 146 chr3R 26126530 intron CG31324 + chr3R 26126603 intron CG31324 + chr3R 26126676 intron,5` UTR CG31324 +,CG14556 + chr3R_8_26125001 chr3R_26125001 RAL-21 2060 chr3R 26166156 26166207 chr3R 26166262 26166313 18 105 5.5 2.0 3.8 3.8 157 chr3R 26166156 intergenic not near genes chr3R 26166234 intergenic not near genes chr3R 26166313 intergenic not near genes chr3R_18_26165001 chr3R_26165001 RAL-21 2061 chr3R 26214274 26214321 chr3R 26214450 26214497 9 173 0.0 5.0 2.5 2.6 223 chr3R 26214274 intergenic not near genes chr3R 26214386 intergenic not near genes chr3R 26214497 intergenic not near genes chr3R_9_26210001 chr3R_26210001 RAL-21 2062 chr3R 26235479 26235522 chr3R 26235576 26235601 8 92 0.5 2.5 1.5 3.2 122 chr3R 26235479 5` UTR CR42745 + chr3R 26235540 5` UTR CR42745 + chr3R 26235601 5` UTR CR42745 + chr3R_8_26235001 chr3R_26235001 RAL-21 2063 chr3R 26294165 26294212 chr3R 26294647 26294694 9 481 2.5 1.5 2.0 3.0 529 chr3R 26294165 intergenic not near genes chr3R 26294430 intergenic not near genes chr3R 26294694 intergenic not near genes chr3R_9_26290001 chr3R_26290001 RAL-21 2064 chr3R 26294697 26294749 chr3R 26294794 26294841 17 93 2.0 3.0 2.5 4.9 144 chr3R 26294697 intergenic not near genes chr3R 26294769 intergenic not near genes chr3R 26294841 intergenic not near genes chr3R_17_26290001 chr3R_26290001 RAL-21 2065 chr3R 26345507 26345539 chr3R 26345596 26345643 9 98 2.0 4.0 3.0 2.2 136 chr3R 26345507 intron CG33970 + chr3R 26345575 intron CG33970 + chr3R 26345643 intron CG33970 + chr3R_9_26345001 chr3R_26345001 RAL-21 2066 chr3R 26370324 26370343 chr3R 26370429 26370448 10 105 0.0 4.0 2.0 3.3 124 chr3R 26370324 intergenic not near genes chr3R 26370386 intergenic not near genes chr3R 26370448 intergenic not near genes chr3R_10_26370001 chr3R_26370001 RAL-21 2067 chr3R 26374824 26374857 chr3R 26374946 26374979 8 119 2.5 2.0 2.2 2.5 155 chr3R 26374824 intergenic not near genes chr3R 26374902 intergenic not near genes chr3R 26374979 intergenic not near genes chr3R_8_26370001 chr3R_26370001 RAL-21 2068 chr3R 26376308 26376350 chr3R 26385487 26385530 roo 15 9175 3.0 5.0 4.0 3.0 9222 chr3R 26376308 intergenic not near genes chr3R 26380919 intergenic not near genes chr3R 26385530 intergenic not near genes chr3R_15_26380001 chr3R_26380001 RAL-21 2069 chr3R 26405901 26405939 chr3R 26405997 26406035 6 96 4.0 1.0 2.5 1.7 134 chr3R 26405901 intergenic not near genes chr3R 26405968 intergenic not near genes chr3R 26406035 intergenic not near genes chr3R_6_26405001 chr3R_26405001 RAL-21 2070 chr3R 26510492 26510533 chr3R 26519573 26519614 roo 12 9080 5.0 7.0 6.0 1.7 9122 chr3R 26510492 intron plum - chr3R 26515053 intron plum - chr3R 26519614 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 RAL-21 2071 chr3R 26523373 26523406 chr3R 26523476 26523503 10 102 1.5 1.5 1.5 4.0 130 chr3R 26523373 intron plum - chr3R 26523438 intron plum - chr3R 26523503 intron plum - chr3R_10_26520001 chr3R_26520001 RAL-21 2072 chr3R 26540981 26541030 chr3R 26541081 26541129 10 97 1.0 4.0 2.5 2.9 148 chr3R 26540981 intron scrib + chr3R 26541055 intron scrib + chr3R 26541129 intron scrib + chr3R_10_26540001 chr3R_26540001 RAL-21 2073 chr3R 26558347 26558360 chr3R 26565656 26565687 Stalker4 4 7320 1.0 3.0 2.0 1.3 7340 chr3R 26558347 intron scrib + chr3R 26562017 intron scrib + chr3R 26565687 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-21 2074 chr3R 26584169 26584193 chr3R 26584262 26584289 7 96 1.0 3.5 2.2 2.2 120 chr3R 26584169 intron scrib + chr3R 26584229 intron scrib + chr3R 26584289 intron scrib + chr3R_7_26580001 chr3R_26580001 RAL-21 2075 chr3R 26641644 26641649 chr3R 26641731 26641756 4 102 6.0 3.5 4.8 0.7 112 chr3R 26641644 intergenic not near genes chr3R 26641700 intergenic not near genes chr3R 26641756 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-21 2076 chr3R 26642718 26642755 chr3R 26643124 26643169 jockey 10 413 4.0 1.5 2.8 2.6 451 chr3R 26642718 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643169 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-21 2077 chr3R 26710810 26710857 chr3R 26710914 26710961 14 102 5.5 3.5 4.5 2.5 151 chr3R 26710810 intron amon - chr3R 26710886 intron amon - chr3R 26710961 intron amon - chr3R_14_26710001 chr3R_26710001 RAL-21 2078 chr3R 26788923 26788962 chr3R 26789019 26789063 4 100 3.0 2.0 2.5 1.1 140 chr3R 26788923 intergenic not near genes chr3R 26788993 intergenic not near genes chr3R 26789063 intergenic not near genes chr3R_4_26785001 chr3R_26785001 RAL-21 2079 chr3R 26810537 26810579 chr3R 26811042 26811084 roo 10 503 5.5 5.0 5.2 1.6 547 chr3R 26810537 intron Tl + chr3R 26810810 intron Tl + chr3R 26811084 intron Tl + chr3R_10_26810001 chr3R_26810001 RAL-21 2080 chr3R 26830665 26830696 chr3R 26830761 26830782 5 94 2.5 2.5 2.5 1.4 117 chr3R 26830665 intron Tl + chr3R 26830724 intron Tl + chr3R 26830782 intron Tl + chr3R_5_26830001 chr3R_26830001 RAL-21 2081 chr3R 27007387 27007425 chr3R 27016542 27016557 roo 8 9147 7.0 3.0 5.0 1.3 9170 chr3R 27007387 intron RYa-R + chr3R 27011972 intron RYa-R + chr3R 27016557 intron RYa-R + chr3R_8_27010001 chr3R_27010001 RAL-21 2082 chr3R 27021526 27021533 chr3R 27021718 27021725 4 192 3.5 6.5 5.0 0.7 199 chr3R 27021526 intron RYa-R + chr3R 27021626 intron RYa-R + chr3R 27021725 intron RYa-R + chr3R_4_27020001 chr3R_27020001 RAL-21 2083 chr3R 27027661 27027704 chr3R 27027765 27027805 4 102 5.0 0.5 2.8 1.1 144 chr3R 27027661 intron RYa-R + chr3R 27027733 intron RYa-R + chr3R 27027805 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-21 2084 chr3R 27028702 27028756 chr3R 27028801 27028855 10 99 2.0 1.0 1.5 4.0 153 chr3R 27028702 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_10_27025001 chr3R_27025001 RAL-21 2085 chr3R 27107151 27107193 chr3R 27107384 27107431 16 239 3.5 5.0 4.2 3.1 280 chr3R 27107151 intergenic not near genes chr3R 27107291 intergenic not near genes chr3R 27107431 intergenic not near genes chr3R_16_27105001 chr3R_27105001 RAL-21 2086 chr3R 27140503 27140547 chr3R 27148123 27148167 412 14 7627 2.5 3.5 3.0 3.5 7664 chr3R 27140503 intron CG6051 - chr3R 27144335 intron CG6051 - chr3R 27148167 intron CG6051 - chr3R_14_27140001 chr3R_27140001 RAL-21 2087 chr3R 27196589 27196631 chr3R 27196731 27196772 4 140 5.0 3.5 4.2 0.8 183 chr3R 27196589 intergenic not near genes chr3R 27196680 intergenic not near genes chr3R 27196772 intergenic not near genes chr3R_4_27195001 chr3R_27195001 RAL-21 2088 chr3R 27221228 27221259 chr3R 27221338 27221369 6 110 3.0 4.5 3.8 1.2 141 chr3R 27221228 intergenic not near genes chr3R 27221298 intergenic not near genes chr3R 27221369 intergenic not near genes chr3R_6_27220001 chr3R_27220001 RAL-21 2089 chr3R 27275831 27275873 chr3R 27275935 27275977 16 104 7.0 7.5 7.2 2.0 146 chr3R 27275831 intron CG5938 + chr3R 27275904 intron CG5938 + chr3R 27275977 intron CG5938 + chr3R_16_27275001 chr3R_27275001 RAL-21 2090 chr3R 27300853 27300858 chr3R 27300965 27300967 4 111 6.5 3.5 5.0 0.7 114 chr3R 27300853 intron CG3339 - chr3R 27300910 intron CG3339 - chr3R 27300967 intron CG3339 - chr3R_4_27300001 chr3R_27300001 RAL-21 2091 chr3R 27326264 27326295 chr3R 27326357 27326388 4 96 2.0 1.0 1.5 1.6 124 chr3R 27326264 intergenic not near genes chr3R 27326326 intergenic not near genes chr3R 27326388 intergenic not near genes chr3R_4_27325001 chr3R_27325001 RAL-21 2092 chr3R 27329466 27329501 chr3R 27329562 27329598 9 96 4.5 4.5 4.5 1.6 132 chr3R 27329466 intergenic CG3330 - chr3R 27329532 intergenic CG3330 - chr3R 27329598 intergenic CG3330 - chr3R_9_27325001 chr3R_27325001 RAL-21 2093 chr3R 27335929 27335965 chr3R 27336030 27336059 7 93 0.5 0.0 0.2 5.8 130 chr3R 27335929 intergenic not near genes chr3R 27335994 intergenic not near genes chr3R 27336059 intergenic not near genes chr3R_7_27335001 chr3R_27335001 RAL-21 2094 chr3R 27342780 27342821 chr3R 27351381 27351422 Tirant 8 8600 2.0 4.0 3.0 2.0 8642 chr3R 27342780 intron CG42534 + chr3R 27347101 intron CG42534 + chr3R 27351422 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-21 2095 chr3R 27353301 27353319 chr3R 27353406 27353424 6 105 3.5 1.0 2.2 1.9 123 chr3R 27353301 intron CG42534 + chr3R 27353362 intron CG42534 + chr3R 27353424 intron CG42534 + chr3R_6_27350001 chr3R_27350001 RAL-21 2096 chr3R 27443381 27443406 chr3R 27443478 27443503 9 96 6.5 2.5 4.5 1.6 122 chr3R 27443381 intergenic not near genes chr3R 27443442 intergenic not near genes chr3R 27443503 intergenic not near genes chr3R_9_27440001 chr3R_27440001 RAL-21 2097 chr3R 27449170 27449199 chr3R 27449254 27449296 6 95 2.0 3.0 2.5 1.7 126 chr3R 27449170 intergenic not near genes chr3R 27449233 intergenic not near genes chr3R 27449296 intergenic not near genes chr3R_6_27445001 chr3R_27445001 RAL-21 2098 chr3R 27452053 27452077 chr3R 27452146 27452171 4 95 1.0 4.0 2.5 1.1 118 chr3R 27452053 intergenic not near genes chr3R 27452112 intergenic not near genes chr3R 27452171 intergenic not near genes chr3R_4_27450001 chr3R_27450001 RAL-21 2099 chr3R 27492358 27492405 chr3R 27492465 27492512 9 106 3.5 1.0 2.2 2.8 154 chr3R 27492358 intergenic not near genes chr3R 27492435 intergenic not near genes chr3R 27492512 intergenic not near genes chr3R_9_27490001 chr3R_27490001 RAL-21 2100 chr3R 27496584 27496603 chr3R 27496696 27496727 10 118 4.0 1.5 2.8 2.6 143 chr3R 27496584 intergenic not near genes chr3R 27496656 intergenic not near genes chr3R 27496727 intergenic not near genes chr3R_10_27495001 chr3R_27495001 RAL-21 2101 chr3R 27506280 27506318 chr3R 27506382 27506420 5 102 1.0 2.0 1.5 2.0 140 chr3R 27506280 intergenic not near genes chr3R 27506350 intergenic not near genes chr3R 27506420 intergenic not near genes chr3R_5_27505001 chr3R_27505001 RAL-21 2102 chr3R 27521138 27521185 chr3R 27530367 27530414 roo 10 9229 3.0 5.0 4.0 2.0 9276 chr3R 27521138 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530414 intron CG12885 + chr3R_10_27525001 chr3R_27525001 RAL-21 2103 chr3R 27705355 27705388 chr3R 27705441 27705477 5 85 0.5 0.5 0.5 3.3 122 chr3R 27705355 exon CG12428 - chr3R 27705416 intron CG12428 - chr3R 27705477 exon CG12428 - chr3R_5_27705001 chr3R_27705001 RAL-21 2104 chr3R 27725555 27725593 chr3R 27731017 27731055 I-element 9 5461 2.5 3.5 3.0 2.2 5500 chr3R 27725555 intergenic not near genes chr3R 27728305 intergenic not near genes chr3R 27731055 intergenic not near genes chr3R_9_27725001 chr3R_27725001 RAL-21 2105 chr3R 27799917 27799962 chr3R 27800019 27800042 14 100 3.5 3.5 3.5 3.1 125 chr3R 27799917 intron CG34353 - chr3R 27799980 intron CG34353 - chr3R 27800042 intron CG34353 - chr3R_14_27795001 chr3R_27795001 RAL-21 2106 chr3R 27851090 27851116 chr3R 27851225 27851256 8 141 1.5 1.5 1.5 3.2 166 chr3R 27851090 intron CG34353 - chr3R 27851173 intron CG34353 - chr3R 27851256 intron CG34353 - chr3R_8_27850001 chr3R_27850001 RAL-21 2107 chr3R 27856738 27856787 chr3R 27858241 27858298 hopper2 7 1500 2.5 1.0 1.8 2.5 1560 chr3R 27856738 intron CG34353 - chr3R 27857518 intron CG34353 - chr3R 27858298 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-21 2108 chr3R 27862939 27862987 chr3R 27868259 27868270 Transpac 10 5301 2.5 3.0 2.8 2.6 5331 chr3R 27862939 intron CG34353 - chr3R 27865604 intron CG34353 - chr3R 27868270 intron CG34353 - chr3R_10_27865001 chr3R_27865001 RAL-21 2109 chr3R 27875687 27875730 chr3R 27882757 27882805 297 15 7071 1.5 5.5 3.5 3.3 7118 chr3R 27875687 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882805 intron CG34353 - chr3R_15_27875001 chr3R_27875001 RAL-21 2110 chr3R 28068475 28068506 chr3R 28073937 28073965 I-element 7 5461 1.0 2.0 1.5 2.8 5490 chr3R 28068475 intron CG34362 + chr3R 28071220 intron CG34362 + chr3R 28073965 intron CG34362 + chr3R_7_28070001 chr3R_28070001 RAL-21 2111 chr3R 28102247 28102268 chr3R 28102322 28102367 6 91 1.0 1.0 1.0 3.0 120 chr3R 28102247 intergenic not near genes chr3R 28102307 intergenic not near genes chr3R 28102367 intergenic not near genes chr3R_6_28100001 chr3R_28100001 RAL-21 2112 chr3R 28152325 28152349 chr3R 28152422 28152446 6 97 5.0 2.0 3.5 1.3 121 chr3R 28152325 intron CG34354 + chr3R 28152386 intron CG34354 + chr3R 28152446 intron CG34354 + chr3R_6_28150001 chr3R_28150001 RAL-21 2113 chr3R 28173676 28173696 chr3R 28181126 28181146 mdg1 4 7449 4.5 4.0 4.2 0.8 7470 chr3R 28173676 intron CG34354 + chr3R 28177411 intron CG34354 + chr3R 28181146 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-21 2114 chr3R 28215831 28215843 chr3R 28215893 28215940 5 89 4.5 2.5 3.5 1.1 109 chr3R 28215831 intron CG34354 + chr3R 28215886 intron CG34354 + chr3R 28215940 intron CG34354 + chr3R_5_28215001 chr3R_28215001 RAL-21 2115 chr3R 28253343 28253350 chr3R 28255873 28255880 jockey 4 2530 3.0 3.0 3.0 1.0 2537 chr3R 28253343 intergenic not near genes chr3R 28254612 intergenic not near genes chr3R 28255880 intergenic not near genes chr3R_4_28250001 chr3R_28250001 RAL-21 2116 chr3R 28253351 28253365 chr3R 28255858 28255895 jockey 8 2521 2.0 1.5 1.8 2.9 2544 chr3R 28253351 intergenic not near genes chr3R 28254623 intergenic not near genes chr3R 28255895 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-21 2117 chr3R 28282975 28283018 chr3R 28283624 28283667 14 649 2.5 2.5 2.5 4.0 692 chr3R 28282975 exon CG34436 + chr3R 28283321 exon CG34436 + chr3R 28283667 intergenic CG34437 +,CG34436 + chr3R_14_28280001 chr3R_28280001 RAL-21 2118 chr3R 28302087 28302125 chr3R 28302545 28302584 jockey 17 459 9.0 3.5 6.2 2.4 497 chr3R 28302087 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302584 intergenic not near genes chr3R_17_28300001 chr3R_28300001 RAL-21 2119 chr3R 28331489 28331530 chr3R 28331588 28331629 12 99 1.0 3.5 2.2 3.8 140 chr3R 28331489 intron larp - chr3R 28331559 intron larp - chr3R 28331629 intron larp - chr3R_12_28330001 chr3R_28330001 RAL-21 2120 chr3R 28352498 28352536 chr3R 28352858 28352895 5 360 4.5 2.5 3.5 1.1 397 chr3R 28352498 exon Or98b + chr3R 28352696 exon Or98b + chr3R 28352895 exon Or98b + chr3R_5_28350001 chr3R_28350001 RAL-21 2121 chr3R 28357557 28357610 chr3R 28357664 28357706 10 97 2.5 2.0 2.2 3.1 149 chr3R 28357557 intergenic not near genes chr3R 28357632 intergenic not near genes chr3R 28357706 intergenic not near genes chr3R_10_28355001 chr3R_28355001 RAL-21 2122 chr3R 28390123 28390146 chr3R 28390196 28390223 9 83 1.5 3.0 2.2 2.8 100 chr3R 28390123 intergenic not near genes chr3R 28390173 intergenic not near genes chr3R 28390223 intergenic not near genes chr3R_9_28390001 chr3R_28390001 RAL-21 2123 chr3R 28393678 28393727 chr3R 28393798 28393847 18 120 3.0 5.0 4.0 3.6 169 chr3R 28393678 intergenic not near genes chr3R 28393762 intergenic not near genes chr3R 28393847 intergenic not near genes chr3R_18_28390001 chr3R_28390001 RAL-21 2124 chr3R 28410963 28411015 chr3R 28411075 28411121 12 111 1.5 2.0 1.8 4.3 158 chr3R 28410963 intergenic not near genes chr3R 28411042 intergenic not near genes chr3R 28411121 intergenic not near genes chr3R_12_28410001 chr3R_28410001 RAL-21 2125 chr3R 28424062 28424104 chr3R 28424220 28424262 11 158 3.5 2.0 2.8 2.9 200 chr3R 28424062 intron beat-VI + chr3R 28424162 intron beat-VI + chr3R 28424262 intron beat-VI + chr3R_11_28420001 chr3R_28420001 RAL-21 2126 chr3R 28480311 28480329 chr3R 28480412 28480424 8 100 1.5 3.5 2.5 2.3 113 chr3R 28480311 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480424 intergenic not near genes chr3R_8_28480001 chr3R_28480001 RAL-21 2127 chr3R 28484354 28484357 chr3R 28486251 28486254 8 1897 58.5 105.0 81.8 0.1 1900 chr3R 28484354 intergenic CG1894 + chr3R 28485304 exon CG1894 + chr3R 28486254 intergenic CG1894 + chr3R_8_28485001 chr3R_28485001 RAL-21 2128 chr3R 28484353 28484390 chr3R 28486255 28486292 54 1900 88.5 100.0 94.2 0.6 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_54_28485001 chr3R_28485001 RAL-21 2129 chr3R 28616456 28616503 chr3R 28616570 28616617 13 114 0.0 4.0 2.0 4.3 161 chr3R 28616456 intron CG10011 - chr3R 28616536 intron CG10011 - chr3R 28616617 intron CG10011 - chr3R_13_28615001 chr3R_28615001 RAL-21 2130 chr3R 28656758 28656777 chr3R 28657669 28657696 4 911 2.5 0.0 1.2 1.8 938 chr3R 28656758 intergenic not near genes chr3R 28657227 intergenic not near genes chr3R 28657696 intergenic not near genes chr3R_4_28655001 chr3R_28655001 RAL-21 2131 chr3R 28656782 28656800 chr3R 28657668 28657693 5 896 1.0 0.0 0.5 3.3 911 chr3R 28656782 intergenic not near genes chr3R 28657238 intergenic not near genes chr3R 28657693 intergenic not near genes chr3R_5_28655001 chr3R_28655001 RAL-21 2132 chr3R 28711722 28711772 chr3R 28711831 28711880 9 108 2.5 2.5 2.5 2.6 158 chr3R 28711722 intron htt + chr3R 28711801 intron htt + chr3R 28711880 intron htt + chr3R_9_28710001 chr3R_28710001 RAL-21 2133 chr3R 28712860 28712877 chr3R 28712969 28712986 8 109 4.5 0.0 2.2 2.5 126 chr3R 28712860 intron htt + chr3R 28712923 intron htt + chr3R 28712986 intron htt + chr3R_8_28710001 chr3R_28710001 RAL-21 2134 chr3R 28742467 28742513 chr3R 28742563 28742609 11 96 2.5 4.0 3.2 2.6 142 chr3R 28742467 intron AstA-R2 - chr3R 28742538 intron AstA-R2 - chr3R 28742609 intron AstA-R2 - chr3R_11_28740001 chr3R_28740001 RAL-21 2135 chr3R 28758266 28758282 chr3R 28763902 28763919 roo 5 5637 8.0 0.0 4.0 1.0 5653 chr3R 28758266 intergenic aqrs - chr3R 28761092 intergenic not near genes chr3R 28763919 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-21 2136 chr3R 28758313 28758318 chr3R 28771340 28771345 Stalker4 4 13027 3.5 0.0 1.8 1.4 13032 chr3R 28758313 intergenic aqrs - chr3R 28764829 intergenic not near genes chr3R 28771345 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-21 2137 chr3R 28792867 28792899 chr3R 28797977 28797996 jockey 5 5108 3.5 0.5 2.0 1.7 5129 chr3R 28792867 intergenic not near genes chr3R 28795432 intergenic not near genes chr3R 28797996 intergenic not near genes chr3R_5_28795001 chr3R_28795001 RAL-21 2138 chr3R 28811577 28811603 chr3R 28811743 28811769 13 165 5.0 11.5 8.2 1.4 192 chr3R 28811577 intergenic wdn - chr3R 28811673 intergenic wdn -,CG1646 + chr3R 28811769 intergenic CG1646 +,wdn - chr3R_13_28810001 chr3R_28810001 RAL-21 2139 chr3R 21907534 21907536 chr3R 28831801 28831802 25 6924266 9.0 6.5 7.8 2.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-21 2140 chr3R 28853374 28853383 chr3R 28853470 28853479 5 96 9.0 5.5 7.2 0.6 105 chr3R 28853374 intron spg + chr3R 28853426 intron spg + chr3R 28853479 intron spg + chr3R_5_28850001 chr3R_28850001 RAL-21 2141 chr3R 28853384 28853411 chr3R 28853466 28853507 9 90 5.0 4.5 4.8 1.6 123 chr3R 28853384 intron spg + chr3R 28853446 intron spg + chr3R 28853507 intron spg + chr3R_9_28850001 chr3R_28850001 RAL-21 2142 chr3R 28950235 28950248 chr3R 28950336 28950349 4 101 3.0 2.5 2.8 1.1 114 chr3R 28950235 intron CG14521 - chr3R 28950292 intron CG14521 - chr3R 28950349 intron CG14521 - chr3R_4_28950001 chr3R_28950001 RAL-21 2143 chr3R 28989898 28989924 chr3R 28990081 28990088 7 183 2.0 3.0 2.5 2.0 190 chr3R 28989898 intergenic not near genes chr3R 28989993 intergenic not near genes chr3R 28990088 intergenic not near genes chr3R_7_28985001 chr3R_28985001 RAL-21 2144 chr3R 29011513 29011557 chr3R 29011774 29011813 11 258 1.0 3.5 2.2 3.4 300 chr3R 29011513 intron wat - chr3R 29011663 intron wat - chr3R 29011813 intron wat - chr3R_11_29010001 chr3R_29010001 RAL-21 2145 chr3R 29032728 29032770 chr3R 29032823 29032853 11 91 8.0 1.5 4.8 1.9 125 chr3R 29032728 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032790 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032853 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_11_29030001 chr3R_29030001 RAL-21 2146 chr3R 29070040 29070080 chr3R 29070141 29070181 13 101 3.0 5.5 4.2 2.5 141 chr3R 29070040 intron CG11873 + chr3R 29070110 intron CG11873 + chr3R 29070181 intron CG11873 + chr3R_13_29070001 chr3R_29070001 RAL-21 2147 chr3R 29128509 29128516 chr3R 29128618 29128626 4 108 0.0 9.5 4.8 0.7 117 chr3R 29128509 intergenic dgt6 -,CG11880 + chr3R 29128568 intergenic dgt6 -,CG11880 + chr3R 29128626 3` UTR dgt6 - chr3R_4_29125001 chr3R_29125001 RAL-21 2148 chr3R 29239207 29239240 chr3R 29245514 29245521 4 6300 0.0 8.0 4.0 0.8 6314 chr3R 29239207 exon CG31427 - chr3R 29242364 exon CG31445 - chr3R 29245521 exon SP1029 - chr3R_4_29240001 chr3R_29240001 RAL-21 2149 chr3R 29237522 29237540 chr3R 29239415 29239428 6 1891 12.5 5.0 8.8 0.6 1906 chr3R 29237522 exon CG11951 - chr3R 29238475 intron CG11951 - chr3R 29239428 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-21 2150 chr3R 29264183 29264194 chr3R 29264305 29264316 4 122 0.0 3.5 1.8 1.4 133 chr3R 29264183 intergenic not near genes chr3R 29264250 intergenic not near genes chr3R 29264316 intergenic not near genes chr3R_4_29260001 chr3R_29260001 RAL-21 2151 chr3R 29282793 29282817 chr3R 29282896 29282921 4 103 0.5 3.5 2.0 1.3 128 chr3R 29282793 intergenic not near genes chr3R 29282857 intergenic not near genes chr3R 29282921 intergenic not near genes chr3R_4_29280001 chr3R_29280001 RAL-21 2152 chr3R 29319810 29319847 chr3R 29320149 29320186 jockey 13 337 5.5 5.5 5.5 2.0 376 chr3R 29319810 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320186 intergenic not near genes chr3R_13_29315001 chr3R_29315001 RAL-21 2153 chr3R 29360227 29360234 chr3R 29360325 29360332 4 98 1.5 1.0 1.2 1.8 105 chr3R 29360227 intergenic not near genes chr3R 29360280 intergenic not near genes chr3R 29360332 intergenic not near genes chr3R_4_29360001 chr3R_29360001 RAL-21 2154 chr3R 29376342 29376364 chr3R 29376450 29376472 7 107 4.5 0.0 2.2 2.2 130 chr3R 29376342 intergenic not near genes chr3R 29376407 intergenic not near genes chr3R 29376472 intergenic not near genes chr3R_7_29375001 chr3R_29375001 RAL-21 2155 chr3R 29402962 29403006 chr3R 29403075 29403121 15 113 2.5 2.0 2.2 4.7 159 chr3R 29402962 intron Ptp99A + chr3R 29403042 intron Ptp99A + chr3R 29403121 intron Ptp99A + chr3R_15_29400001 chr3R_29400001 RAL-21 2156 chr3R 29406601 29406648 chr3R 29407907 29407935 jockey 5 1301 0.0 3.5 1.8 1.8 1334 chr3R 29406601 intron Ptp99A + chr3R 29407268 intron Ptp99A + chr3R 29407935 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-21 2157 chr3R 29430356 29430404 chr3R 29430482 29430522 11 123 3.0 2.0 2.5 3.1 166 chr3R 29430356 intron Ptp99A + chr3R 29430439 intron Ptp99A + chr3R 29430522 intron Ptp99A + chr3R_11_29430001 chr3R_29430001 RAL-21 2158 chr3R 29471987 29472033 chr3R 29472100 29472134 5 104 2.5 2.0 2.2 1.6 147 chr3R 29471987 intron Ptp99A + chr3R 29472060 intron Ptp99A + chr3R 29472134 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-21 2159 chr3R 29505873 29505905 chr3R 29505970 29506002 5 93 4.5 0.5 2.5 1.4 129 chr3R 29505873 intergenic not near genes chr3R 29505938 intergenic not near genes chr3R 29506002 intergenic not near genes chr3R_5_29505001 chr3R_29505001 RAL-21 2160 chr3R 29506757 29506798 chr3R 29506848 29506874 5 88 1.5 0.5 1.0 2.5 117 chr3R 29506757 intergenic not near genes chr3R 29506816 intergenic not near genes chr3R 29506874 intergenic not near genes chr3R_5_29505001 chr3R_29505001 RAL-21 2161 chr3R 29538037 29538166 chr3R 29538136 29538266 8 98 0.0 0.0 0.0 8.0 229 chr3R 29538037 intergenic not near genes chr3R 29538152 intergenic not near genes chr3R 29538266 intergenic not near genes chr3R_8_29535001 chr3R_29535001 RAL-21 2162 chr3R 29581532 29581559 chr3R 29581633 29581660 13 101 0.5 6.5 3.5 2.9 128 chr3R 29581532 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581660 intergenic not near genes chr3R_13_29580001 chr3R_29580001 RAL-21 2163 chr3R 29606929 29606962 chr3R 29607027 29607060 10 97 2.0 1.5 1.8 3.6 131 chr3R 29606929 intron alph + chr3R 29606994 intron alph + chr3R 29607060 intron alph + chr3R_10_29605001 chr3R_29605001 RAL-21 2164 chr3R 29738247 29738293 chr3R 29739734 29739780 hobo 16 1486 3.0 3.0 3.0 4.0 1533 chr3R 29738247 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739780 5` UTR CG1969 + chr3R_16_29735001 chr3R_29735001 RAL-21 2165 chr3R 29882001 29882053 chr3R 29891178 29891227 roo 20 9176 3.0 1.0 2.0 6.7 9226 chr3R 29882001 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891227 intron CG31038 + chr3R_20_29885001 chr3R_29885001 RAL-21 2166 chr3R 30084865 30084879 chr3R 30086327 30086353 hobo 4 1478 1.0 4.0 2.5 1.1 1488 chr3R 30084865 intron sima + chr3R 30085609 intron sima + chr3R 30086353 intron sima + chr3R_4_30085001 chr3R_30085001 RAL-21 2167 chr3R 30124944 30124978 chr3R 30125040 30125060 8 92 0.5 0.5 0.5 5.3 116 chr3R 30124944 intergenic CG45073 - chr3R 30125002 intergenic CG45073 - chr3R 30125060 intergenic CG45073 - chr3R_8_30125001 chr3R_30125001 RAL-21 2168 chr3R 30132804 30132851 chr3R 30132906 30132953 14 101 6.0 4.5 5.2 2.3 149 chr3R 30132804 intergenic Tpi -,CG31029 - chr3R 30132878 intergenic Tpi -,CG31029 - chr3R 30132953 intergenic Tpi - chr3R_14_30130001 chr3R_30130001 RAL-21 2169 chr3R 30175677 30175728 chr3R 30175783 30175828 13 106 2.5 2.5 2.5 3.7 151 chr3R 30175677 intergenic CG1983 - chr3R 30175752 intergenic CG1983 - chr3R 30175828 3` UTR CG1983 - chr3R_13_30175001 chr3R_30175001 RAL-21 2170 chr3R 30238741 30238789 chr3R 30239925 30239953 1360 11 1182 4.0 0.0 2.0 3.7 1212 chr3R 30238741 intergenic not near genes chr3R 30239347 intergenic not near genes chr3R 30239953 intergenic not near genes chr3R_11_30235001 chr3R_30235001 RAL-21 2171 chr3R 30253671 30253704 chr3R 30253802 30253835 5 126 0.5 1.5 1.0 2.5 164 chr3R 30253671 exon CG18404 + chr3R 30253753 intron CG18404 + chr3R 30253835 intron CG18404 + chr3R_5_30250001 chr3R_30250001 RAL-21 2172 chr3R 30268225 30268446 chr3R 30268323 30268522 11 92 1.5 1.5 1.5 4.4 297 chr3R 30268225 intergenic not near genes chr3R 30268374 intergenic not near genes chr3R 30268522 intergenic not near genes chr3R_11_30265001 chr3R_30265001 RAL-21 2173 chr3R 30330506 30330524 chr3R 30330571 30330582 8 82 2.0 1.5 1.8 2.9 76 chr3R 30330506 intron hdc + chr3R 30330544 intron hdc + chr3R 30330582 intron hdc + chr3R_8_30330001 chr3R_30330001 RAL-21 2174 chr3R 30375518 30375563 chr3R 30383163 30383168 412 14 7640 3.0 1.5 2.2 4.4 7650 chr3R 30375518 intergenic not near genes chr3R 30379343 intergenic not near genes chr3R 30383168 intergenic not near genes chr3R_14_30375001 chr3R_30375001 RAL-21 2175 chr3R 30396205 30396239 chr3R 30404491 30404525 roo 7 8285 2.5 5.0 3.8 1.5 8320 chr3R 30396205 intergenic not near genes chr3R 30400365 intergenic not near genes chr3R 30404525 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-21 2176 chr3R 30456373 30456418 chr3R 30456473 30456518 12 98 3.0 5.5 4.2 2.3 145 chr3R 30456373 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456518 3` UTR CG2224 - chr3R_12_30455001 chr3R_30455001 RAL-21 2177 chr3R 30458004 30458042 chr3R 30458104 30458142 18 96 4.0 7.5 5.8 2.6 138 chr3R 30458004 intron CG2224 - chr3R 30458073 intron CG2224 - chr3R 30458142 intron CG2224 - chr3R_18_30455001 chr3R_30455001 RAL-21 2178 chr3R 30480456 30480511 chr3R 30482944 30482998 jockey 11 2484 0.0 3.0 1.5 4.4 2542 chr3R 30480456 intron PH4alphaEFB + chr3R 30481727 intron PH4alphaEFB + chr3R 30482998 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 RAL-21 2179 chr3R 30488102 30488122 chr3R 30488201 30488221 7 99 1.5 0.0 0.8 3.9 119 chr3R 30488102 intergenic Jon99Fii - chr3R 30488162 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_7_30485001 chr3R_30485001 RAL-21 2180 chr3R 30498404 30498423 chr3R 30498624 30498633 8 219 0.0 4.5 2.2 2.5 229 chr3R 30498404 intron PH4alphaNE1 - chr3R 30498518 intron PH4alphaNE1 - chr3R 30498633 intron PH4alphaNE1 - chr3R_8_30495001 chr3R_30495001 RAL-21 2181 chr3R 30548997 30549029 chr3R 30549104 30549141 8 111 5.5 5.0 5.2 1.3 144 chr3R 30548997 intron tmod + chr3R 30549069 intron tmod + chr3R 30549141 intron tmod + chr3R_8_30545001 chr3R_30545001 RAL-21 2182 chr3R 30571700 30571727 chr3R 30571800 30571826 8 100 1.0 1.5 1.2 3.6 126 chr3R 30571700 intron tmod + chr3R 30571763 intron tmod + chr3R 30571826 exon tmod + chr3R_8_30570001 chr3R_30570001 RAL-21 2183 chr3R 30591284 30591338 chr3R 30591398 30591445 13 108 0.0 2.5 1.2 5.9 161 chr3R 30591284 intergenic not near genes chr3R 30591364 intergenic not near genes chr3R 30591445 intergenic not near genes chr3R_13_30590001 chr3R_30590001 RAL-21 2184 chr3R 30627589 30627633 chr3R 30627689 30627702 9 95 3.0 3.5 3.2 2.1 113 chr3R 30627589 3` UTR CG2267 - chr3R 30627646 exon CG2267 - chr3R 30627702 exon CG2267 - chr3R_9_30625001 chr3R_30625001 RAL-21 2185 chr3R 30649851 30649877 chr3R 30649952 30649978 5 99 3.0 1.0 2.0 1.7 127 chr3R 30649851 3` UTR CG34432 + chr3R 30649914 intergenic CG34432 +,CG34433 + chr3R 30649978 exon CG34433 + chr3R_5_30645001 chr3R_30645001 RAL-21 2186 chr3R 30671765 30671808 chr3R 30671865 30671904 6 97 2.0 2.0 2.0 2.0 139 chr3R 30671765 intergenic not near genes chr3R 30671834 intergenic not near genes chr3R 30671904 intergenic not near genes chr3R_6_30670001 chr3R_30670001 RAL-21 2187 chr3R 30679499 30679550 chr3R 30686988 30687037 blood 7 7482 2.5 2.5 2.5 2.0 7538 chr3R 30679499 intergenic not near genes chr3R 30683268 intergenic not near genes chr3R 30687037 intergenic not near genes chr3R_7_30680001 chr3R_30680001 RAL-21 2188 chr3R 30690150 30690174 chr3R 30690253 30690278 6 103 6.5 5.0 5.8 0.9 128 chr3R 30690150 intergenic Spn100A + chr3R 30690214 intergenic Spn100A + chr3R 30690278 intergenic Spn100A + chr3R_6_30690001 chr3R_30690001 RAL-21 2189 chr3R 30700850 30700879 chr3R 30700988 30701022 5 142 1.5 0.0 0.8 2.8 172 chr3R 30700850 intergenic not near genes chr3R 30700936 intergenic not near genes chr3R 30701022 intergenic not near genes chr3R_5_30700001 chr3R_30700001 RAL-21 2190 chr3R 30818792 30818830 chr3R 30820377 30820415 1360 11 1584 3.0 4.5 3.8 2.3 1623 chr3R 30818792 intron cindr + chr3R 30819604 intron cindr + chr3R 30820415 intron cindr + chr3R_11_30815001 chr3R_30815001 RAL-21 2191 chr3R 30850221 30850270 chr3R 30850333 30850381 16 110 2.5 1.5 2.0 5.3 160 chr3R 30850221 intergenic not near genes chr3R 30850301 intergenic not near genes chr3R 30850381 intergenic not near genes chr3R_16_30850001 chr3R_30850001 RAL-21 2192 chr3R 30859392 30859403 chr3R 30859489 30859501 6 96 6.0 4.0 5.0 1.0 109 chr3R 30859392 intergenic not near genes chr3R 30859446 intergenic not near genes chr3R 30859501 intergenic not near genes chr3R_6_30855001 chr3R_30855001 RAL-21 2193 chr3R 30859406 30859419 chr3R 30859488 30859517 7 96 2.5 4.0 3.2 1.7 111 chr3R 30859406 intergenic not near genes chr3R 30859462 intergenic not near genes chr3R 30859517 intergenic not near genes chr3R_7_30855001 chr3R_30855001 RAL-21 2194 chr3R 30900510 30900539 chr3R 30900600 30900639 10 96 3.5 5.0 4.2 1.9 129 chr3R 30900510 exon Cyp4c3 + chr3R 30900574 3` UTR Cyp4c3 + chr3R 30900639 3` UTR Cyp4c3 + chr3R_10_30900001 chr3R_30900001 RAL-21 2195 chr3R 30973127 30973163 chr3R 30973292 30973344 10 177 2.5 2.0 2.2 3.1 217 chr3R 30973127 intron 5-HT7 - chr3R 30973236 intron 5-HT7 - chr3R 30973344 intron 5-HT7 - chr3R_10_30970001 chr3R_30970001 RAL-21 2196 chr3R 31042089 31042140 chr3R 31042196 31042247 10 104 5.5 3.5 4.5 1.8 158 chr3R 31042089 intron CanA1 + chr3R 31042168 intron CanA1 + chr3R 31042247 intron CanA1 + chr3R_10_31040001 chr3R_31040001 RAL-21 2197 chr3R 31069659 31069676 chr3R 31069759 31069773 8 110 2.0 2.0 2.0 2.7 114 chr3R 31069659 intron Sox100B + chr3R 31069716 intron Sox100B + chr3R 31069773 intron Sox100B + chr3R_8_31065001 chr3R_31065001 RAL-21 2198 chr3R 31074212 31074258 chr3R 31081830 31081876 springer 13 7618 3.0 1.0 2.0 4.3 7664 chr3R 31074212 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081876 intron Sox100B + chr3R_13_31075001 chr3R_31075001 RAL-21 2199 chr3R 31087098 31087127 chr3R 31087611 31087633 5 522 1.5 2.0 1.8 1.8 535 chr3R 31087098 intergenic not near genes chr3R 31087366 intergenic not near genes chr3R 31087633 intergenic not near genes chr3R_5_31085001 chr3R_31085001 RAL-21 2200 chr3R 31245766 31245787 chr3R 31245873 31245893 4 106 4.5 3.0 3.8 0.8 127 chr3R 31245766 intron qless - chr3R 31245830 intron qless - chr3R 31245893 intron qless - chr3R_4_31245001 chr3R_31245001 RAL-21 2201 chr3R 31265263 31265283 chr3R 31265425 31265435 6 160 7.0 3.0 5.0 1.0 172 chr3R 31265263 intergenic ppk24 + chr3R 31265349 intergenic ppk24 + chr3R 31265435 intergenic ppk24 + chr3R_6_31265001 chr3R_31265001 RAL-21 2202 chr3R 31279394 31279405 chr3R 31285570 31285575 diver 4 6192 0.5 3.0 1.8 1.4 6181 chr3R 31279394 intergenic not near genes chr3R 31282484 intergenic not near genes chr3R 31285575 intergenic not near genes chr3R_4_31280001 chr3R_31280001 RAL-21 2203 chr3R 31320142 31320189 chr3R 31320257 31320284 18 112 1.5 4.5 3.0 4.5 142 chr3R 31320142 intron CG34347 + chr3R 31320213 intron CG34347 + chr3R 31320284 intron CG34347 + chr3R_18_31320001 chr3R_31320001 RAL-21 2204 chr3R 31413085 31413113 chr3R 31418305 31418318 copia 6 5206 3.0 3.0 3.0 1.5 5233 chr3R 31413085 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418318 intron Gprk2 + chr3R_6_31415001 chr3R_31415001 RAL-21 2205 chr3R 31422524 31422556 chr3R 31422635 31422642 11 107 2.0 4.5 3.2 2.6 118 chr3R 31422524 intron Gprk2 + chr3R 31422583 intron Gprk2 + chr3R 31422642 intron Gprk2 + chr3R_11_31420001 chr3R_31420001 RAL-21 2206 chr3R 31426867 31426910 chr3R 31426979 31427017 14 111 3.0 5.0 4.0 2.8 150 chr3R 31426867 intron Gprk2 + chr3R 31426942 intron Gprk2 + chr3R 31427017 intron Gprk2 + chr3R_14_31425001 chr3R_31425001 RAL-21 2207 chr3R 31435341 31435388 chr3R 31435513 31435553 9 170 5.0 3.0 4.0 1.8 212 chr3R 31435341 intron Gprk2 + chr3R 31435447 intron Gprk2 + chr3R 31435553 intron Gprk2 + chr3R_9_31435001 chr3R_31435001 RAL-21 2208 chr3R 31442251 31442296 chr3R 31442355 31442392 8 101 2.5 3.0 2.8 2.1 141 chr3R 31442251 intron Gprk2 + chr3R 31442322 intron Gprk2 + chr3R 31442392 intron Gprk2 + chr3R_8_31440001 chr3R_31440001 RAL-21 2209 chr3R 31446067 31446100 chr3R 31446177 31446213 6 111 3.0 1.5 2.2 1.9 146 chr3R 31446067 intron Gprk2 + chr3R 31446140 intron Gprk2 + chr3R 31446213 intron Gprk2 + chr3R_6_31445001 chr3R_31445001 RAL-21 2210 chr3R 31539842 31539885 chr3R 31539947 31539990 9 102 0.5 2.5 1.5 3.6 148 chr3R 31539842 intergenic not near genes chr3R 31539916 intergenic not near genes chr3R 31539990 intergenic not near genes chr3R_9_31535001 chr3R_31535001 RAL-21 2211 chr3R 31571603 31571652 chr3R 31571705 31571754 12 101 4.0 3.5 3.8 2.5 151 chr3R 31571603 intergenic not near genes chr3R 31571678 intergenic gammaCOP + chr3R 31571754 intergenic gammaCOP + chr3R_12_31570001 chr3R_31570001 RAL-21 2212 chr3R 31610098 31610126 chr3R 31610204 31610232 6 104 7.0 5.0 6.0 0.9 134 chr3R 31610098 intron CycG - chr3R 31610165 intron CycG - chr3R 31610232 intron CycG - chr3R_6_31610001 chr3R_31610001 RAL-21 2213 chr3R 31610132 31610147 chr3R 31610202 31610253 8 102 3.0 5.0 4.0 1.6 121 chr3R 31610132 intron CycG - chr3R 31610192 intron CycG - chr3R 31610253 intron CycG - chr3R_8_31610001 chr3R_31610001 RAL-21 2214 chr3R 31808773 31808823 chr3R 31808912 31808915 13 131 3.5 0.0 1.8 4.6 142 chr3R 31808773 intron CG11576 - chr3R 31808844 intron CG11576 - chr3R 31808915 intron CG11576 - chr3R_13_31805001 chr3R_31805001 RAL-21 2215 chr3R 31897829 31897876 chr3R 31897986 31898013 4 150 1.0 1.5 1.2 1.8 184 chr3R 31897829 intron heph - chr3R 31897921 intron heph - chr3R 31898013 intron heph - chr3R_4_31895001 chr3R_31895001 RAL-21 2216 chr3R 31911664 31911693 chr3R 31911770 31911799 7 105 3.5 3.5 3.5 1.6 135 chr3R 31911664 intron heph - chr3R 31911732 intron heph - chr3R 31911799 intron heph - chr3R_7_31910001 chr3R_31910001 RAL-21 2217 chr3R 31911694 31911698 chr3R 31911763 31911798 6 93 3.0 2.5 2.8 1.6 104 chr3R 31911694 intron heph - chr3R 31911746 intron heph - chr3R 31911798 intron heph - chr3R_6_31910001 chr3R_31910001 RAL-21 2218 chr3R 31931174 31931215 chr3R 31931277 31931318 15 101 4.0 1.0 2.5 4.3 144 chr3R 31931174 intron heph - chr3R 31931246 intron heph - chr3R 31931318 intron heph - chr3R_15_31930001 chr3R_31930001 RAL-21 2219 chr3R 31957968 31958013 chr3R 31958070 31958115 5 102 1.5 3.0 2.2 1.6 147 chr3R 31957968 intron heph - chr3R 31958042 intron heph - chr3R 31958115 intron heph - chr3R_5_31955001 chr3R_31955001 RAL-21 2220 chr3R 31997974 31998024 chr3R 32005464 32005514 blood 5 7484 2.5 3.5 3.0 1.2 7540 chr3R 31997974 intron heph - chr3R 32001744 intron heph - chr3R 32005514 intron heph - chr3R_5_32000001 chr3R_32000001 RAL-21 2221 chr3R 32016692 32016733 chr3R 32016791 32016831 10 92 5.0 5.5 5.2 1.6 139 chr3R 32016692 5` UTR CR45557 + chr3R 32016762 5` UTR CR45557 + chr3R 32016831 5` UTR CR45557 + chr3R_10_32015001 chr3R_32015001 RAL-21 2222 chr3R 32034250 32034256 chr3R 32034352 32034359 5 102 12.5 3.0 7.8 0.6 109 chr3R 32034250 intergenic not near genes chr3R 32034304 intergenic not near genes chr3R 32034359 intergenic not near genes chr3R_5_32030001 chr3R_32030001 RAL-21 2223 chr3R 32034262 32034290 chr3R 32034350 32034386 5 96 4.0 3.0 3.5 1.1 124 chr3R 32034262 intergenic not near genes chr3R 32034324 intergenic not near genes chr3R 32034386 intergenic not near genes chr3R_5_32030001 chr3R_32030001 RAL-21 2224 chr3R 32061685 32061731 chr3R 32062009 32062055 15 325 26.5 26.5 26.5 0.5 370 chr3R 32061685 intron Map205 - chr3R 32061870 intron Map205 - chr3R 32062055 intron Map205 - chr3R_15_32060001 chr3R_32060001 RAL-21 2225 chr4 76485 76514 chr4 81948 81977 I-element 6 5459 4.5 3.5 4.0 1.2 5492 chr4 76485 intron pan + chr4 79231 intron pan + chr4 81977 intron pan + chr4_6_75001 chr4_75001 RAL-21 2226 chr4 264955 264997 chr4 265178 265210 7 221 4.5 4.5 4.5 1.3 255 chr4 264955 exon RhoGAP102A + chr4 265082 3` UTR RhoGAP102A + chr4 265210 3` UTR RhoGAP102A + chr4_7_265001 chr4_265001 RAL-21 2227 chr4 319983 320016 chr4 328165 328212 Stalker2 12 8190 4.0 4.5 4.2 2.3 8229 chr4 319983 3` UTR CG32850 + chr4 324098 intron CG32850 + chr4 328212 3` UTR,3` UTR CG32850 +,PMCA - chr4_12_320001 chr4_320001 RAL-21 2228 chr4 409207 409242 chr4 409305 409345 13 102 3.5 0.0 1.8 4.6 138 chr4 409207 intergenic not near genes chr4 409276 intergenic not near genes chr4 409345 intergenic not near genes chr4_13_405001 chr4_405001 RAL-21 2229 chr4 662166 662201 chr4 662830 662866 INE-1 12 663 3.0 5.0 4.0 2.4 700 chr4 662166 intron gw - chr4 662516 intron gw - chr4 662866 5` UTR gw - chr4_12_660001 chr4_660001 RAL-21 2230 chr4 671585 671634 chr4 680188 680227 Tirant 6 8597 3.5 4.0 3.8 1.2 8642 chr4 671585 intron CG11360 + chr4 675906 intron CG11360 + chr4 680227 intron CG11360 + chr4_6_675001 chr4_675001 RAL-21 2231 chr4 852882 852921 chr4 853265 853300 10 383 5.5 3.5 4.5 1.8 418 chr4 852882 intergenic not near genes chr4 853091 intergenic not near genes chr4 853300 intergenic CG11148 - chr4_10_850001 chr4_850001 RAL-21 2232 chrX 295839 295877 chrX 303479 303517 412 5 7639 1.5 5.5 3.5 1.1 7678 chrX 295839 intron CG3777 + chrX 299678 intron CG3777 + chrX 303517 intron CG3777 + chrX_5_295001 chrX_295001 RAL-21 2233 chrX 318459 318498 chrX 323563 323603 flea 12 5105 3.0 5.5 4.2 2.3 5144 chrX 318459 intron,intron CG3777 +,CG32816 - chrX 321031 intron,intron CG3777 +,CG32816 - chrX 323603 intron,intron CG3777 +,CG32816 - chrX_12_320001 chrX_320001 RAL-21 2234 chrX 428402 428451 chrX 434607 434656 3S18 15 6204 4.5 3.0 3.8 3.1 6254 chrX 428402 intron CG32816 - chrX 431529 intron CG32816 - chrX 434656 intron CG32816 - chrX_15_430001 chrX_430001 RAL-21 2235 chrX 726067 726117 chrX 726171 726221 7 99 1.0 4.0 2.5 2.0 154 chrX 726067 intron sdk + chrX 726144 intron sdk + chrX 726221 intron sdk + chrX_7_725001 chrX_725001 RAL-21 2236 chrX 802293 802321 chrX 802368 802393 7 83 2.5 4.0 3.2 1.7 100 chrX 802293 exon CG13359 - chrX 802343 exon CG13359 - chrX 802393 exon CG13359 - chrX_7_800001 chrX_800001 RAL-21 2237 chrX 812250 812294 chrX 817900 817944 297 20 5647 4.0 4.5 4.2 3.8 5694 chrX 812250 intron CG43867 - chrX 815097 intron CG43867 - chrX 817944 intron CG43867 - chrX_20_815001 chrX_815001 RAL-21 2238 chrX 827584 827595 chrX 835395 835397 roo 4 7809 5.0 3.5 4.2 0.8 7813 chrX 827584 intron CG43867 - chrX 831490 intron CG43867 - chrX 835397 intron CG43867 - chrX_4_830001 chrX_830001 RAL-21 2239 chrX 906693 906729 chrX 908502 908528 S-element 10 1806 2.5 8.5 5.5 1.5 1835 chrX 906693 intron CG43867 - chrX 907610 intron CG43867 - chrX 908528 intron CG43867 - chrX_10_905001 chrX_905001 RAL-21 2240 chrX 1051058 1051093 chrX 1051156 1051169 7 95 4.0 5.0 4.5 1.3 111 chrX 1051058 intron CR44779 + chrX 1051114 intron CR44779 + chrX 1051169 intron CR44779 + chrX_7_1050001 chrX_1050001 RAL-21 2241 chrX 1053117 1053119 chrX 16983077 16983077 4 15929960 8.0 5.5 6.8 0.5 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-21 2242 chrX 1055519 1055567 chrX 1055954 1056002 6 435 1.0 1.5 1.2 2.7 483 chrX 1055519 intron CR44779 + chrX 1055760 intron CR44779 + chrX 1056002 intron CR44779 + chrX_6_1055001 chrX_1055001 RAL-21 2243 chrX 1063737 1063750 chrX 1072550 1072563 roo 7 8813 6.5 4.0 5.2 1.1 8826 chrX 1063737 intron CR44779 + chrX 1068150 intron CR44779 + chrX 1072563 intron CR44779 + chrX_7_1065001 chrX_1065001 RAL-21 2244 chrX 1153187 1153215 chrX 1153278 1153318 6 101 2.5 5.0 3.8 1.2 131 chrX 1153187 intergenic not near genes chrX 1153252 intergenic not near genes chrX 1153318 intergenic not near genes chrX_6_1150001 chrX_1150001 RAL-21 2245 chrX 1163283 1163325 chrX 1163381 1163423 8 96 2.5 4.0 3.2 1.9 140 chrX 1163283 intergenic CG34320 - chrX 1163353 intergenic CG34320 - chrX 1163423 intergenic CG34320 - chrX_8_1160001 chrX_1160001 RAL-21 2246 chrX 1185545 1185590 chrX 1185636 1185683 7 95 4.5 2.5 3.5 1.6 138 chrX 1185545 intron CG14626 + chrX 1185614 intron CG14626 + chrX 1185683 intron CG14626 + chrX_7_1185001 chrX_1185001 RAL-21 2247 chrX 1272548 1272597 chrX 1272674 1272693 9 120 2.5 2.5 2.5 2.6 145 chrX 1272548 intron Atf3 - chrX 1272620 intron Atf3 - chrX 1272693 intron Atf3 - chrX_9_1270001 chrX_1270001 RAL-21 2248 chrX 1357775 1357795 chrX 1367952 1367959 Doc 6 10183 2.5 3.5 3.0 1.5 10184 chrX 1357775 intergenic png - chrX 1362867 intergenic not near genes chrX 1367959 intergenic not near genes chrX_6_1360001 chrX_1360001 RAL-21 2249 chrX 1428571 1428623 chrX 1428677 1428729 11 104 1.5 2.5 2.0 3.7 158 chrX 1428571 intron futsch + chrX 1428650 intron futsch + chrX 1428729 intron futsch + chrX_11_1425001 chrX_1425001 RAL-21 2250 chrX 1753125 1753152 chrX 1753212 1753250 6 87 2.5 0.5 1.5 2.4 125 chrX 1753125 intron Scgdelta - chrX 1753188 intron Scgdelta - chrX 1753250 intron Scgdelta - chrX_6_1750001 chrX_1750001 RAL-21 2251 chrX 1930530 1930570 chrX 1938107 1938133 opus 13 7582 4.5 3.5 4.0 2.6 7603 chrX 1930530 intergenic CG11596 + chrX 1934332 intergenic not near genes chrX 1938133 3` UTR CG3857 - chrX_13_1930001 chrX_1930001 RAL-21 2252 chrX 2393780 2393826 chrX 2393927 2393972 5 134 2.0 0.5 1.2 2.3 192 chrX 2393780 intergenic not near genes chrX 2393876 intergenic not near genes chrX 2393972 intergenic not near genes chrX_5_2390001 chrX_2390001 RAL-21 2253 chrX 2559341 2559386 chrX 2559449 2559494 13 106 3.0 4.0 3.5 2.9 153 chrX 2559341 intron Pdfr + chrX 2559418 intron Pdfr + chrX 2559494 intron Pdfr + chrX_13_2555001 chrX_2555001 RAL-21 2254 chrX 2578816 2578845 chrX 2578910 2578945 6 102 2.5 5.0 3.8 1.2 129 chrX 2578816 intergenic Pdfr +,Vha36-3 - chrX 2578880 intergenic Vha36-3 -,Pdfr + chrX 2578945 intergenic Vha36-3 -,Pdfr + chrX_6_2575001 chrX_2575001 RAL-21 2255 chrX 2610369 2610381 chrX 2617506 2617506 HMS-Beagle 6 7135 5.5 4.5 5.0 1.0 7137 chrX 2610369 intergenic CG8636 - chrX 2613938 intergenic not near genes chrX 2617506 intergenic Tsp3A - chrX_6_2610001 chrX_2610001 RAL-21 2256 chrX 2664381 2664414 chrX 2665531 2665560 1360 9 1157 3.0 5.0 4.0 1.8 1179 chrX 2664381 intron sgg + chrX 2664970 intron sgg + chrX 2665560 intron sgg + chrX_9_2660001 chrX_2660001 RAL-21 2257 chrX 2844882 2844921 chrX 2852312 2852351 mdg1 8 7429 5.0 0.5 2.8 2.1 7469 chrX 2844882 intron kirre + chrX 2848616 intron kirre + chrX 2852351 intron kirre + chrX_8_2845001 chrX_2845001 RAL-21 2258 chrX 2914663 2914680 chrX 2914816 2914822 4 149 3.5 0.0 1.8 1.4 159 chrX 2914663 intron kirre + chrX 2914742 intron kirre + chrX 2914822 intron kirre + chrX_4_2910001 chrX_2910001 RAL-21 2259 chrX 2917076 2917120 chrX 2917175 2917214 15 99 3.0 4.0 3.5 3.3 138 chrX 2917076 intron kirre + chrX 2917145 intron kirre + chrX 2917214 intron kirre + chrX_15_2915001 chrX_2915001 RAL-21 2260 chrX 3038721 3038766 chrX 3038828 3038874 8 105 1.0 3.0 2.0 2.7 153 chrX 3038721 intron kirre + chrX 3038798 intron kirre + chrX 3038874 intron kirre + chrX_8_3035001 chrX_3035001 RAL-21 2261 chrX 3058006 3058044 chrX 3058267 3058305 pogo 5 260 4.0 3.5 3.8 1.0 299 chrX 3058006 intron kirre + chrX 3058156 intron kirre + chrX 3058305 intron kirre + chrX_5_3055001 chrX_3055001 RAL-21 2262 chrX 3075613 3075650 chrX 3080942 3080977 Transpac 4 5327 1.0 0.0 0.5 2.7 5364 chrX 3075613 intron kirre + chrX 3078295 intron kirre + chrX 3080977 intron kirre + chrX_4_3075001 chrX_3075001 RAL-21 2263 chrX 3218501 3218515 chrX 3227670 3227684 roo 5 9169 2.0 4.0 3.0 1.2 9183 chrX 3218501 intron dnc + chrX 3223092 intron dnc + chrX 3227684 intron dnc + chrX_5_3220001 chrX_3220001 RAL-21 2264 chrX 3243620 3243659 chrX 3243730 3243763 7 108 2.0 7.5 4.8 1.2 143 chrX 3243620 intron dnc + chrX 3243692 intron dnc + chrX 3243763 intron dnc + chrX_7_3240001 chrX_3240001 RAL-21 2265 chrX 3260873 3260902 chrX 3260951 3261000 4 90 0.5 1.5 1.0 2.0 127 chrX 3260873 intron dnc + chrX 3260936 intron dnc + chrX 3261000 intron dnc + chrX_4_3260001 chrX_3260001 RAL-21 2266 chrX 3306325 3306375 chrX 3306426 3306477 5 101 2.5 0.0 1.2 2.3 152 chrX 3306325 intron dnc + chrX 3306401 intron dnc + chrX 3306477 intron dnc + chrX_5_3305001 chrX_3305001 RAL-21 2267 chrX 3414320 3414365 chrX 3414467 3414512 14 146 1.0 1.0 1.0 7.0 192 chrX 3414320 intron,intron CR44999 +,CG12535 - chrX 3414416 intron,intron CR44999 +,CG12535 - chrX 3414512 intron,intron CR44999 +,CG12535 - chrX_14_3410001 chrX_3410001 RAL-21 2268 chrX 3415022 3415050 chrX 3421201 3421255 3S18 4 6190 1.5 0.5 1.0 2.0 6233 chrX 3415022 intron,intron CR44999 +,CG12535 - chrX 3418138 intron,intron CR44999 +,CG12535 - chrX 3421255 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-21 2269 chrX 3493082 3493114 chrX 3502261 3502274 roo 7 9175 2.0 0.5 1.2 3.2 9192 chrX 3493082 intron,intron CR44999 +,Gas8 - chrX 3497678 intron,intron CR44999 +,Gas8 - chrX 3502274 intron,intron CR44999 +,Gas8 - chrX_7_3495001 chrX_3495001 RAL-21 2270 chrX 3513742 3513762 chrX 3513845 3513865 5 103 4.0 2.5 3.2 1.2 123 chrX 3513742 intron,intron CR44999 +,CG32791 - chrX 3513804 intron,intron CR44999 +,CG32791 - chrX 3513865 intron,intron CR44999 +,CG32791 - chrX_5_3510001 chrX_3510001 RAL-21 2271 chrX 3513764 3513787 chrX 3513841 3513890 8 100 1.0 2.5 1.8 2.9 126 chrX 3513764 intron,intron CR44999 +,CG32791 - chrX 3513827 intron,intron CR44999 +,CG32791 - chrX 3513890 intron,intron CR44999 +,CG32791 - chrX_8_3510001 chrX_3510001 RAL-21 2272 chrX 3582706 3582708 chrX 3582809 3582811 4 103 3.0 3.5 3.2 1.0 105 chrX 3582706 intron AstA-R1 + chrX 3582758 intron AstA-R1 + chrX 3582811 intron AstA-R1 + chrX_4_3580001 chrX_3580001 RAL-21 2273 chrX 3597089 3597121 chrX 3597197 3597229 7 106 1.5 4.0 2.8 1.8 140 chrX 3597089 intron AstA-R1 + chrX 3597159 intron AstA-R1 + chrX 3597229 intron AstA-R1 + chrX_7_3595001 chrX_3595001 RAL-21 2274 chrX 3597529 3597567 chrX 3619717 3619730 roo 6 22182 3.0 1.5 2.2 1.9 22201 chrX 3597529 intron AstA-R1 + chrX 3608630 intron AstA-R1 + chrX 3619730 intron AstA-R1 + chrX_6_3605001 chrX_3605001 RAL-21 2275 chrX 3626132 3626145 chrX 3626229 3626250 4 103 0.0 0.5 0.2 3.3 118 chrX 3626132 intron AstA-R1 + chrX 3626191 intron AstA-R1 + chrX 3626250 intron AstA-R1 + chrX_4_3625001 chrX_3625001 RAL-21 2276 chrX 3630530 3630574 chrX 3630626 3630670 9 96 0.5 1.0 0.8 5.0 140 chrX 3630530 intron AstA-R1 + chrX 3630600 intron AstA-R1 + chrX 3630670 intron AstA-R1 + chrX_9_3630001 chrX_3630001 RAL-21 2277 chrX 3713083 3713131 chrX 3713208 3713260 9 129 0.5 2.5 1.5 3.6 177 chrX 3713083 intron Rala - chrX 3713172 intron Rala - chrX 3713260 intron Rala - chrX_9_3710001 chrX_3710001 RAL-21 2278 chrX 3726751 3726765 chrX 3730165 3730172 NOF 5 3412 3.5 0.5 2.0 1.7 3421 chrX 3726751 intron tlk + chrX 3728462 intron tlk + chrX 3730172 intron tlk + chrX_5_3725001 chrX_3725001 RAL-21 2279 chrX 3866086 3866137 chrX 3866184 3866210 14 94 0.0 1.5 0.8 7.8 124 chrX 3866086 intron yin - chrX 3866148 intron yin - chrX 3866210 intron yin - chrX_14_3865001 chrX_3865001 RAL-21 2280 chrX 3881252 3881303 chrX 3881411 3881461 11 159 0.5 3.0 1.8 3.9 209 chrX 3881252 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881461 exon VhaAC39-1 + chrX_11_3880001 chrX_3880001 RAL-21 2281 chrX 3986845 3986895 chrX 3994498 3994515 412 11 7648 1.5 3.0 2.2 3.4 7670 chrX 3986845 intergenic not near genes chrX 3990680 intergenic not near genes chrX 3994515 intergenic not near genes chrX_11_3990001 chrX_3990001 RAL-21 2282 chrX 4048481 4048515 chrX 4048577 4048598 8 94 5.0 2.5 3.8 1.7 117 chrX 4048481 3` UTR CR45482 - chrX 4048540 3` UTR CR45482 - chrX 4048598 3` UTR CR45482 - chrX_8_4045001 chrX_4045001 RAL-21 2283 chrX 4101849 4101897 chrX 4101948 4101990 8 96 1.0 2.0 1.5 3.2 141 chrX 4101849 exon CG15375 + chrX 4101920 exon CG15375 + chrX 4101990 exon CG15375 + chrX_8_4100001 chrX_4100001 RAL-21 2284 chrX 4128001 4128041 chrX 4128108 4128142 11 106 3.5 3.5 3.5 2.4 141 chrX 4128001 3` UTR tyf + chrX 4128072 3` UTR tyf + chrX 4128142 3` UTR tyf + chrX_11_4125001 chrX_4125001 RAL-21 2285 chrX 4276469 4276510 chrX 4276563 4276609 6 91 3.0 3.0 3.0 1.5 140 chrX 4276469 intergenic CG15577 - chrX 4276539 3` UTR CG15577 - chrX 4276609 exon CG15577 - chrX_6_4275001 chrX_4275001 RAL-21 2286 chrX 4409123 4409161 chrX 4409228 4409266 16 105 5.5 6.5 6.0 2.3 143 chrX 4409123 intron CR32773 - chrX 4409194 intron CR32773 - chrX 4409266 intron CR32773 - chrX_16_4405001 chrX_4405001 RAL-21 2287 chrX 4515828 4515854 chrX 4515922 4515951 7 97 1.5 2.0 1.8 2.5 123 chrX 4515828 intron CR32773 - chrX 4515890 intron CR32773 - chrX 4515951 intron CR32773 - chrX_7_4515001 chrX_4515001 RAL-21 2288 chrX 4574879 4574926 chrX 4574990 4575029 10 109 1.5 2.0 1.8 3.6 150 chrX 4574879 intron CR32773 - chrX 4574954 intron CR32773 - chrX 4575029 intron CR32773 - chrX_10_4570001 chrX_4570001 RAL-21 2289 chrX 4700381 4700425 chrX 4700740 4700788 jockey 14 362 4.0 4.0 4.0 2.8 407 chrX 4700381 3` UTR ctp + chrX 4700584 3` UTR ctp + chrX 4700788 3` UTR ctp + chrX_14_4700001 chrX_4700001 RAL-21 2290 chrX 4763239 4763284 chrX 4763747 4763770 Stalker4 9 504 2.0 4.0 3.0 2.2 531 chrX 4763239 intergenic not near genes chrX 4763504 intergenic not near genes chrX 4763770 intergenic not near genes chrX_9_4760001 chrX_4760001 RAL-21 2291 chrX 4792364 4792391 chrX 4792817 4792835 jockey 5 451 4.5 3.5 4.0 1.0 471 chrX 4792364 intergenic not near genes chrX 4792600 intergenic not near genes chrX 4792835 intergenic not near genes chrX_5_4790001 chrX_4790001 RAL-21 2292 chrX 4859878 4859890 chrX 4860005 4860019 4 128 4.0 0.5 2.2 1.2 141 chrX 4859878 intron CG42594 + chrX 4859948 intron CG42594 + chrX 4860019 intron CG42594 + chrX_4_4855001 chrX_4855001 RAL-21 2293 chrX 4936604 4936647 chrX 4937334 4937363 9 727 0.0 2.0 1.0 4.5 759 chrX 4936604 intron CG44774 - chrX 4936984 intron CG44774 - chrX 4937363 intron CG44774 - chrX_9_4935001 chrX_4935001 RAL-21 2294 chrX 4990027 4990060 chrX 4997261 4997294 roo 8 7234 4.5 4.0 4.2 1.5 7267 chrX 4990027 intron CR44833 - chrX 4993660 intron CR44833 - chrX 4997294 intron CR44833 - chrX_8_4990001 chrX_4990001 RAL-21 2295 chrX 5014212 5014237 chrX 5014441 5014455 4 230 2.0 1.0 1.5 1.6 243 chrX 5014212 intron CR44833 - chrX 5014334 intron CR44833 - chrX 5014455 intron CR44833 - chrX_4_5010001 chrX_5010001 RAL-21 2296 chrX 5096258 5096293 chrX 5103843 5103878 springer 7 7585 0.5 5.0 2.8 1.8 7620 chrX 5096258 intron,intron CG15465 +,rg + chrX 5100068 intron,intron CG15465 +,rg + chrX 5103878 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 RAL-21 2297 chrX 5131383 5131420 chrX 5131483 5131498 6 87 3.5 0.5 2.0 2.0 115 chrX 5131383 intron,intron CG15465 +,rg + chrX 5131440 intron,intron CG15465 +,rg + chrX 5131498 intron,intron CG15465 +,rg + chrX_6_5130001 chrX_5130001 RAL-21 2298 chrX 5159710 5159721 chrX 5159825 5159836 4 115 2.5 0.5 1.5 1.6 126 chrX 5159710 intron,intron CG15465 +,rg + chrX 5159773 intron,intron CG15465 +,rg + chrX 5159836 intron,intron CG15465 +,rg + chrX_4_5155001 chrX_5155001 RAL-21 2299 chrX 5252818 5252871 chrX 5253015 5253052 14 194 2.5 1.5 2.0 4.7 234 chrX 5252818 3` UTR,3` UTR CG15465 +,rg + chrX 5252935 3` UTR,3` UTR CG15465 +,rg + chrX 5253052 3` UTR,3` UTR CG15465 +,rg + chrX_14_5250001 chrX_5250001 RAL-21 2300 chrX 5338688 5338706 chrX 5339961 5339975 jockey 6 1271 2.0 0.5 1.2 2.7 1287 chrX 5338688 intergenic not near genes chrX 5339332 intergenic not near genes chrX 5339975 intergenic SK + chrX_6_5335001 chrX_5335001 RAL-21 2301 chrX 5345430 5345466 chrX 5345562 5345598 7 132 0.5 4.5 2.5 2.0 168 chrX 5345430 intron SK + chrX 5345514 intron SK + chrX 5345598 intron SK + chrX_7_5345001 chrX_5345001 RAL-21 2302 chrX 5349259 5349305 chrX 5349356 5349402 14 96 2.0 2.0 2.0 4.7 143 chrX 5349259 intron SK + chrX 5349330 intron SK + chrX 5349402 intron SK + chrX_14_5345001 chrX_5345001 RAL-21 2303 chrX 5501357 5501365 chrX 5501456 5501463 4 99 1.0 1.5 1.2 1.8 106 chrX 5501357 intergenic CG4151 +,CG32762 - chrX 5501410 intergenic CG4151 +,CG32762 - chrX 5501463 intergenic CG4151 +,CG32762 - chrX_4_5500001 chrX_5500001 RAL-21 2304 chrX 5599948 5599955 chrX 5600055 5600062 4 107 0.0 4.5 2.2 1.2 114 chrX 5599948 intron Vsx1 + chrX 5600005 intron Vsx1 + chrX 5600062 intron Vsx1 + chrX_4_5600001 chrX_5600001 RAL-21 2305 chrX 5797656 5797697 chrX 5797760 5797789 11 101 0.0 5.0 2.5 3.1 133 chrX 5797656 intergenic not near genes chrX 5797722 intergenic not near genes chrX 5797789 intergenic not near genes chrX_11_5795001 chrX_5795001 RAL-21 2306 chrX 5883789 5883837 chrX 5884050 5884095 pogo 11 261 4.0 3.5 3.8 2.3 306 chrX 5883789 intron CR45668 - chrX 5883942 intron CR45668 - chrX 5884095 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-21 2307 chrX 5884156 5884167 chrX 5884412 5884428 pogo 5 260 7.5 5.0 6.2 0.7 272 chrX 5884156 intron CR45668 - chrX 5884292 intron CR45668 - chrX 5884428 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-21 2308 chrX 5884172 5884192 chrX 5884402 5884447 pogo 7 254 4.0 4.0 4.0 1.4 275 chrX 5884172 intron CR45668 - chrX 5884310 intron CR45668 - chrX 5884447 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-21 2309 chrX 6003279 6003310 chrX 6003376 6003411 9 101 1.5 3.5 2.5 2.6 132 chrX 6003279 intron CR44498 + chrX 6003345 intron CR44498 + chrX 6003411 intron CR44498 + chrX_9_6000001 chrX_6000001 RAL-21 2310 chrX 6118686 6118731 chrX 6118788 6118833 7 92 3.5 3.0 3.2 1.7 147 chrX 6118686 intron Ca-alpha1T - chrX 6118760 intron Ca-alpha1T - chrX 6118833 intron Ca-alpha1T - chrX_7_6115001 chrX_6115001 RAL-21 2311 chrX 6171583 6171614 chrX 6179036 6179039 Quasimodo 6 7445 2.5 4.5 3.5 1.3 7456 chrX 6171583 intron Ca-alpha1T - chrX 6175311 intron Ca-alpha1T - chrX 6179039 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-21 2312 chrX 6312187 6312226 chrX 6312275 6312329 9 100 2.0 2.0 2.0 3.0 142 chrX 6312187 intron CG15894 + chrX 6312258 intron CG15894 + chrX 6312329 intron CG15894 + chrX_9_6310001 chrX_6310001 RAL-21 2313 chrX 6314402 6314451 chrX 6314498 6314522 5 74 1.5 2.0 1.8 1.8 120 chrX 6314402 intron CG15894 + chrX 6314462 intron CG15894 + chrX 6314522 intron CG15894 + chrX_5_6310001 chrX_6310001 RAL-21 2314 chrX 6335223 6335239 chrX 6337750 6337769 Tirant 4 2529 0.0 7.0 3.5 0.9 2546 chrX 6335223 intergenic not near genes chrX 6336496 intergenic not near genes chrX 6337769 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-21 2315 chrX 6357623 6357656 chrX 6357920 6357953 5 291 2.0 1.0 1.5 2.0 330 chrX 6357623 intron kdn + chrX 6357788 intron kdn + chrX 6357953 intron kdn + chrX_5_6355001 chrX_6355001 RAL-21 2316 chrX 6388645 6388689 chrX 6388741 6388785 10 95 1.0 3.5 2.2 3.1 140 chrX 6388645 intergenic not near genes chrX 6388715 intergenic not near genes chrX 6388785 intergenic not near genes chrX_10_6385001 chrX_6385001 RAL-21 2317 chrX 6392865 6392895 chrX 6397644 6397679 Doc 9 4783 2.0 3.0 2.5 2.6 4814 chrX 6392865 intergenic not near genes chrX 6395272 intergenic not near genes chrX 6397679 intergenic not near genes chrX_9_6395001 chrX_6395001 RAL-21 2318 chrX 6403780 6403831 chrX 6403967 6404018 9 183 4.0 3.5 3.8 1.9 238 chrX 6403780 intergenic not near genes chrX 6403899 intergenic not near genes chrX 6404018 intergenic not near genes chrX_9_6400001 chrX_6400001 RAL-21 2319 chrX 6487969 6487980 chrX 6488071 6488082 4 102 3.5 3.5 3.5 0.9 113 chrX 6487969 intron CG42340 - chrX 6488026 intron CG42340 - chrX 6488082 intron CG42340 - chrX_4_6485001 chrX_6485001 RAL-21 2320 chrX 6591834 6591856 chrX 6591939 6591961 5 105 3.5 0.5 2.0 1.7 127 chrX 6591834 intron Pat1 + chrX 6591898 intron Pat1 + chrX 6591961 intron Pat1 + chrX_5_6590001 chrX_6590001 RAL-21 2321 chrX 6605458 6605505 chrX 6608500 6608504 Burdock 10 3037 4.0 5.5 4.8 1.7 3046 chrX 6605458 intron pigs + chrX 6606981 intron pigs + chrX 6608504 intron pigs + chrX_10_6605001 chrX_6605001 RAL-21 2322 chrX 6629766 6629790 chrX 6629873 6629897 4 107 1.0 1.5 1.2 1.8 131 chrX 6629766 intron pigs + chrX 6629832 intron pigs + chrX 6629897 intron pigs + chrX_4_6625001 chrX_6625001 RAL-21 2323 chrX 6897574 6897585 chrX 6897672 6897683 4 96 0.5 0.0 0.2 3.3 109 chrX 6897574 intergenic not near genes chrX 6897628 intergenic not near genes chrX 6897683 intergenic not near genes chrX_4_6895001 chrX_6895001 RAL-21 2324 chrX 6897592 6897697 chrX 6897659 6897827 5 117 0.0 0.0 0.0 5.0 235 chrX 6897592 intergenic not near genes chrX 6897710 intergenic not near genes chrX 6897827 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-21 2325 chrX 6989488 6989504 chrX 6989594 6989611 7 106 4.5 2.0 3.2 1.7 123 chrX 6989488 intron ogre - chrX 6989550 intron ogre - chrX 6989611 intron ogre - chrX_7_6985001 chrX_6985001 RAL-21 2326 chrX 6989505 6989534 chrX 6989591 6989641 6 101 2.0 2.0 2.0 2.0 136 chrX 6989505 intron ogre - chrX 6989573 intron ogre - chrX 6989641 intron ogre - chrX_6_6985001 chrX_6985001 RAL-21 2327 chrX 7023586 7023629 chrX 7030991 7031037 Tabor 7 7408 3.5 2.0 2.8 1.8 7451 chrX 7023586 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031037 intron CG12541 - chrX_7_7025001 chrX_7025001 RAL-21 2328 chrX 7125242 7125274 chrX 7134407 7134453 roo 4 9171 0.0 2.5 1.2 1.8 9211 chrX 7125242 intergenic not near genes chrX 7129848 intergenic not near genes chrX 7134453 intergenic not near genes chrX_4_7125001 chrX_7125001 RAL-21 2329 chrX 7222878 7222909 chrX 7222979 7223010 5 100 2.0 0.5 1.2 2.3 132 chrX 7222878 intron,intron CG9650 +,CR44357 - chrX 7222944 intron,intron CG9650 +,CR44357 - chrX 7223010 intron,intron CG9650 +,CR44357 - chrX_5_7220001 chrX_7220001 RAL-21 2330 chrX 7381148 7381180 chrX 7381251 7381283 5 103 2.5 1.5 2.0 1.7 135 chrX 7381148 intron,intron CR44357 -,CG1677 - chrX 7381216 intron,intron CR44357 -,CG1677 - chrX 7381283 intron,intron CR44357 -,CG1677 - chrX_5_7380001 chrX_7380001 RAL-21 2331 chrX 7552230 7552261 chrX 7552327 7552358 9 96 2.5 0.0 1.2 4.1 128 chrX 7552230 intergenic not near genes chrX 7552294 intergenic not near genes chrX 7552358 intergenic not near genes chrX_9_7550001 chrX_7550001 RAL-21 2332 chrX 7702886 7702921 chrX 7703345 7703380 jockey 12 458 4.5 4.0 4.2 2.3 494 chrX 7702886 intron CHES-1-like - chrX 7703133 intron CHES-1-like - chrX 7703380 intron CHES-1-like - chrX_12_7700001 chrX_7700001 RAL-21 2333 chrX 7737147 7737188 chrX 7737249 7737290 4 98 0.0 1.0 0.5 2.7 143 chrX 7737147 5` UTR Tom40 + chrX 7737218 intron Tom40 + chrX 7737290 intron Tom40 + chrX_4_7735001 chrX_7735001 RAL-21 2334 chrX 7832420 7832432 chrX 7832529 7832541 4 109 7.5 3.0 5.2 0.6 121 chrX 7832420 intron CG1402 + chrX 7832480 intron CG1402 + chrX 7832541 intron CG1402 + chrX_4_7830001 chrX_7830001 RAL-21 2335 chrX 7832433 7832464 chrX 7832527 7832571 10 104 3.0 3.0 3.0 2.5 138 chrX 7832433 intron CG1402 + chrX 7832502 intron CG1402 + chrX 7832571 intron CG1402 + chrX_10_7830001 chrX_7830001 RAL-21 2336 chrX 7845719 7845742 chrX 7847215 7847253 hopper2 4 1507 1.5 4.0 2.8 1.1 1534 chrX 7845719 intergenic not near genes chrX 7846486 intergenic not near genes chrX 7847253 intergenic not near genes chrX_4_7845001 chrX_7845001 RAL-21 2337 chrX 7881825 7881879 chrX 7881930 7881981 7 104 2.5 1.5 2.0 2.3 156 chrX 7881825 intergenic Ir7f -,Ir7e - chrX 7881903 intergenic Ir7f -,Ir7e - chrX 7881981 3` UTR Ir7f - chrX_7_7880001 chrX_7880001 RAL-21 2338 chrX 8031411 8031452 chrX 8035740 8035781 Juan 6 4329 7.5 9.0 8.2 0.7 4370 chrX 8031411 intergenic not near genes chrX 8033596 intergenic not near genes chrX 8035781 3` UTR CG2233 - chrX_6_8030001 chrX_8030001 RAL-21 2339 chrX 8079906 8079935 chrX 8080026 8080065 10 126 3.5 1.5 2.5 2.9 159 chrX 8079906 exon CG2254 - chrX 8079986 intron CG2254 - chrX 8080065 intron CG2254 - chrX_10_8075001 chrX_8075001 RAL-21 2340 chrX 8506034 8506053 chrX 8506132 8506147 5 97 4.5 6.0 5.2 0.8 113 chrX 8506034 intron CG33181 + chrX 8506090 intron CG33181 + chrX 8506147 intron CG33181 + chrX_5_8505001 chrX_8505001 RAL-21 2341 chrX 8506510 8506560 chrX 8506738 8506777 9 222 1.5 1.5 1.5 3.6 267 chrX 8506510 intron CG33181 + chrX 8506644 intron CG33181 + chrX 8506777 intron CG33181 + chrX_9_8505001 chrX_8505001 RAL-21 2342 chrX 8708690 8708737 chrX 8708853 8708900 13 163 28.5 16.5 22.5 0.6 210 chrX 8708690 intergenic not near genes chrX 8708795 intergenic not near genes chrX 8708900 intergenic not near genes chrX_13_8705001 chrX_8705001 RAL-21 2343 chrX 8922318 8922350 chrX 8922772 8922794 jockey 7 451 3.0 2.0 2.5 2.0 476 chrX 8922318 intron rdgA + chrX 8922556 intron rdgA + chrX 8922794 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-21 2344 chrX 8948742 8948782 chrX 8956272 8956302 roo 9 7528 4.0 2.5 3.2 2.1 7560 chrX 8948742 intron rdgA + chrX 8952522 intron rdgA + chrX 8956302 intron rdgA + chrX_9_8950001 chrX_8950001 RAL-21 2345 chrX 9152061 9152108 chrX 9152164 9152211 13 103 3.0 1.0 2.0 4.3 150 chrX 9152061 intergenic dalao +,His3.3B - chrX 9152136 intergenic dalao +,His3.3B - chrX 9152211 intergenic dalao +,His3.3B - chrX_13_9150001 chrX_9150001 RAL-21 2346 chrX 9229889 9229937 chrX 9229989 9230037 11 97 3.5 3.5 3.5 2.4 148 chrX 9229889 intron CG12121 - chrX 9229963 intron CG12121 - chrX 9230037 intron CG12121 - chrX_11_9225001 chrX_9225001 RAL-21 2347 chrX 9272999 9273043 chrX 9273100 9273144 14 101 4.5 4.0 4.2 2.7 145 chrX 9272999 intergenic Cfp1 -,CG16892 + chrX 9273072 intergenic Cfp1 -,CG16892 + chrX 9273144 intergenic Cfp1 -,CG16892 + chrX_14_9270001 chrX_9270001 RAL-21 2348 chrX 9543400 9543425 chrX 9543499 9543519 9 98 2.0 2.5 2.2 2.8 119 chrX 9543400 intron CG32700 - chrX 9543460 intron CG32700 - chrX 9543519 intron CG32700 - chrX_9_9540001 chrX_9540001 RAL-21 2349 chrX 9575783 9575810 chrX 9576118 9576141 mdg3 11 338 2.5 3.5 3.0 2.8 358 chrX 9575783 intron,exon CG32699 -,CG42395 - chrX 9575962 intron,intron CG32699 -,CG42395 - chrX 9576141 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 RAL-21 2350 chrX 9577024 9577067 chrX 9577494 9577537 14 464 8.0 2.5 5.2 2.3 513 chrX 9577024 intron CG32699 - chrX 9577280 intron CG32699 - chrX 9577537 intron CG32699 - chrX_14_9575001 chrX_9575001 RAL-21 2351 chrX 9791848 9791885 chrX 9791962 9792002 11 116 2.5 2.5 2.5 3.1 154 chrX 9791848 intron CG32698 + chrX 9791925 intron CG32698 + chrX 9792002 intron CG32698 + chrX_11_9790001 chrX_9790001 RAL-21 2352 chrX 10027144 10027199 chrX 10027243 10027291 15 96 4.0 1.5 2.8 3.9 147 chrX 10027144 intron Cht6 + chrX 10027218 intron Cht6 + chrX 10027291 intron Cht6 + chrX_15_10025001 chrX_10025001 RAL-21 2353 chrX 10056607 10056656 chrX 10056820 10056869 15 213 3.0 3.5 3.2 3.6 262 chrX 10056607 3` UTR CG15312 - chrX 10056738 3` UTR CG15312 - chrX 10056869 3` UTR CG15312 - chrX_15_10055001 chrX_10055001 RAL-21 2354 chrX 10138197 10138243 chrX 10145721 10145767 412 13 7522 3.0 3.5 3.2 3.1 7570 chrX 10138197 intron,intron RhoU +,CR44894 - chrX 10141982 intron,intron RhoU +,CR44894 - chrX 10145767 intron,intron RhoU +,CR44894 - chrX_13_10140001 chrX_10140001 RAL-21 2355 chrX 10187739 10187781 chrX 10188099 10188141 12 359 2.0 4.5 3.2 2.9 402 chrX 10187739 intron,intron CR44894 -,CG43902 + chrX 10187940 intron,intron CR44894 -,CG43902 + chrX 10188141 intron,exon CR44894 -,CG43902 + chrX_12_10185001 chrX_10185001 RAL-21 2356 chrX 10216849 10216850 chrX 10216925 10216951 5 94 5.0 6.0 5.5 0.8 102 chrX 10216849 3` UTR l(1)G0230 + chrX 10216900 3` UTR l(1)G0230 + chrX 10216951 3` UTR l(1)G0230 + chrX_5_10215001 chrX_10215001 RAL-21 2357 chrX 10267296 10267331 chrX 10276466 10276501 roo 9 9169 0.5 1.5 1.0 4.5 9205 chrX 10267296 3` UTR alpha-Man-I - chrX 10271898 intron alpha-Man-I - chrX 10276501 3` UTR alpha-Man-I - chrX_9_10270001 chrX_10270001 RAL-21 2358 chrX 10306051 10306070 chrX 10306152 10306171 6 101 5.0 0.5 2.8 1.6 120 chrX 10306051 intron alpha-Man-I - chrX 10306111 intron alpha-Man-I - chrX 10306171 intron alpha-Man-I - chrX_6_10305001 chrX_10305001 RAL-21 2359 chrX 10317535 10317582 chrX 10317633 10317680 9 98 2.0 3.0 2.5 2.6 145 chrX 10317535 intron alpha-Man-I - chrX 10317608 intron alpha-Man-I - chrX 10317680 intron alpha-Man-I - chrX_9_10315001 chrX_10315001 RAL-21 2360 chrX 10348779 10348826 chrX 10356364 10356411 springer 8 7582 3.0 2.5 2.8 2.1 7632 chrX 10348779 intergenic snoRNA:U3:9B + chrX 10352595 intergenic not near genes chrX 10356411 intergenic l(1)G0289 - chrX_8_10350001 chrX_10350001 RAL-21 2361 chrX 10382647 10382687 chrX 10382749 10382789 7 101 0.0 0.5 0.2 5.8 142 chrX 10382647 exon CG17841 + chrX 10382718 3` UTR CG17841 + chrX 10382789 3` UTR CG17841 + chrX_7_10380001 chrX_10380001 RAL-21 2362 chrX 10453053 10453100 chrX 10453264 10453311 9 211 3.5 3.0 3.2 2.1 258 chrX 10453053 intron CG32683 - chrX 10453182 intron CG32683 - chrX 10453311 intron CG32683 - chrX_9_10450001 chrX_10450001 RAL-21 2363 chrX 10489586 10489612 chrX 10489749 10489766 8 160 4.0 2.0 3.0 2.0 180 chrX 10489586 intergenic not near genes chrX 10489676 intergenic not near genes chrX 10489766 intergenic not near genes chrX_8_10485001 chrX_10485001 RAL-21 2364 chrX 10532487 10532525 chrX 10532586 10532613 10 93 3.5 4.5 4.0 2.0 126 chrX 10532487 intron spri - chrX 10532550 intron spri - chrX 10532613 intron spri - chrX_10_10530001 chrX_10530001 RAL-21 2365 chrX 10550314 10550361 chrX 10550412 10550458 13 97 3.5 4.0 3.8 2.7 144 chrX 10550314 intron spri - chrX 10550386 intron spri - chrX 10550458 intron spri - chrX_13_10550001 chrX_10550001 RAL-21 2366 chrX 10550838 10550887 chrX 10552325 10552346 hobo 9 1479 2.5 0.5 1.5 3.6 1508 chrX 10550838 intron spri - chrX 10551592 intron spri - chrX 10552346 intron spri - chrX_9_10550001 chrX_10550001 RAL-21 2367 chrX 10686030 10686082 chrX 10691187 10691239 roo 12 5155 3.0 2.0 2.5 3.4 5209 chrX 10686030 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_12_10685001 chrX_10685001 RAL-21 2368 chrX 10923172 10923214 chrX 10925527 10925569 8 2356 12.0 27.0 19.5 0.4 2397 chrX 10923172 3` UTR CG43901 + chrX 10924370 exon v + chrX 10925569 3` UTR v + chrX_8_10920001 chrX_10920001 RAL-21 2369 chrX 11034283 11034320 chrX 11034618 11034670 4 346 1.5 3.5 2.5 1.1 387 chrX 11034283 intron CG42339 - chrX 11034476 intron CG42339 - chrX 11034670 intron CG42339 - chrX_4_11030001 chrX_11030001 RAL-21 2370 chrX 11095986 11096024 chrX 11103108 11103114 HMS-Beagle 9 7116 3.0 2.0 2.5 2.6 7128 chrX 11095986 intergenic not near genes chrX 11099550 intergenic not near genes chrX 11103114 intron CG42249 + chrX_9_11095001 chrX_11095001 RAL-21 2371 chrX 11109417 11109417 chrX 12946233 12946235 4 1836817 14.0 19.0 16.5 0.2 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-21 2372 chrX 11167766 11167805 chrX 11167868 11167899 5 99 1.0 2.0 1.5 2.0 133 chrX 11167766 intergenic antdh - chrX 11167832 intergenic antdh - chrX 11167899 intergenic antdh - chrX_5_11165001 chrX_11165001 RAL-21 2373 chrX 11254190 11254196 chrX 11254321 11254327 4 131 6.5 6.5 6.5 0.5 137 chrX 11254190 intron CG44422 - chrX 11254258 intron CG44422 - chrX 11254327 intron CG44422 - chrX_4_11250001 chrX_11250001 RAL-21 2374 chrX 11268567 11268590 chrX 11270069 11270073 hopper2 4 1501 0.5 2.5 1.5 1.6 1506 chrX 11268567 intron CG44422 - chrX 11269320 intron CG44422 - chrX 11270073 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-21 2375 chrX 11379745 11379790 chrX 11379910 11379955 10 165 2.5 3.5 3.0 2.5 210 chrX 11379745 intron dlg1 + chrX 11379850 intron dlg1 + chrX 11379955 intron dlg1 + chrX_10_11375001 chrX_11375001 RAL-21 2376 chrX 11535023 11535040 chrX 11541513 11541530 Burdock 9 6490 5.5 2.0 3.8 1.9 6507 chrX 11535023 intron Drak + chrX 11538276 intron Drak + chrX 11541530 intron Drak + chrX_9_11535001 chrX_11535001 RAL-21 2377 chrX 11571439 11571482 chrX 11571700 11571743 pogo 12 260 7.0 4.0 5.5 1.8 304 chrX 11571439 3` UTR Kmn1 - chrX 11571591 3` UTR Kmn1 - chrX 11571743 3` UTR Kmn1 - chrX_12_11570001 chrX_11570001 RAL-21 2378 chrX 11633395 11633441 chrX 11640469 11640501 297 11 7072 5.0 5.0 5.0 1.8 7106 chrX 11633395 intron Ptp10D + chrX 11636948 intron Ptp10D + chrX 11640501 intron Ptp10D + chrX_11_11635001 chrX_11635001 RAL-21 2379 chrX 11645116 11645135 chrX 11648300 11648325 NOF 5 3185 7.0 5.5 6.2 0.7 3209 chrX 11645116 intron Ptp10D + chrX 11646720 intron Ptp10D + chrX 11648325 intron Ptp10D + chrX_5_11645001 chrX_11645001 RAL-21 2380 chrX 11699042 11699093 chrX 11699148 11699199 11 105 2.0 3.5 2.8 2.9 157 chrX 11699042 intron PhKgamma + chrX 11699120 intron PhKgamma + chrX 11699199 intron PhKgamma + chrX_11_11695001 chrX_11695001 RAL-21 2381 chrX 11804657 11804690 chrX 11804781 11804814 5 123 1.5 2.0 1.8 1.8 157 chrX 11804657 intron Hsc70-3 - chrX 11804736 intron Hsc70-3 - chrX 11804814 intron Hsc70-3 - chrX_5_11800001 chrX_11800001 RAL-21 2382 chrX 12038074 12038106 chrX 12038288 12038316 10 214 5.0 3.0 4.0 2.0 242 chrX 12038074 intergenic not near genes chrX 12038195 intergenic not near genes chrX 12038316 intergenic not near genes chrX_10_12035001 chrX_12035001 RAL-21 2383 chrX 12094036 12094060 chrX 12094148 12094171 7 110 1.0 5.5 3.2 1.7 135 chrX 12094036 intron,intron CR43960 +,Ten-a + chrX 12094104 intron,intron CR43960 +,Ten-a + chrX 12094171 intron,intron CR43960 +,Ten-a + chrX_7_12090001 chrX_12090001 RAL-21 2384 chrX 12156826 12156874 chrX 12156943 12156991 7 117 2.0 6.0 4.0 1.4 165 chrX 12156826 intron Ten-a + chrX 12156908 intron Ten-a + chrX 12156991 intron Ten-a + chrX_7_12155001 chrX_12155001 RAL-21 2385 chrX 12168127 12168166 chrX 12173589 12173613 I-element 5 5459 4.5 0.5 2.5 1.4 5486 chrX 12168127 intron Ten-a + chrX 12170870 intron Ten-a + chrX 12173613 intron Ten-a + chrX_5_12170001 chrX_12170001 RAL-21 2386 chrX 12191576 12191584 chrX 12191684 12191692 4 108 1.5 3.5 2.5 1.1 116 chrX 12191576 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191692 intron Ten-a + chrX_4_12190001 chrX_12190001 RAL-21 2387 chrX 12202751 12202791 chrX 12202854 12202894 8 103 3.5 2.0 2.8 2.1 143 chrX 12202751 intron Ten-a + chrX 12202822 intron Ten-a + chrX 12202894 intron Ten-a + chrX_8_12200001 chrX_12200001 RAL-21 2388 chrX 12381842 12381902 chrX 12385775 12385824 flea 4 3928 0.0 2.0 1.0 2.0 3982 chrX 12381842 intergenic not near genes chrX 12383833 intergenic not near genes chrX 12385824 intergenic not near genes chrX_4_12380001 chrX_12380001 RAL-21 2389 chrX 12430928 12430953 chrX 12431026 12431051 5 98 1.5 0.5 1.0 2.5 123 chrX 12430928 intergenic not near genes chrX 12430990 intergenic not near genes chrX 12431051 intergenic not near genes chrX_5_12430001 chrX_12430001 RAL-21 2390 chrX 12442070 12442099 chrX 12442172 12442199 6 102 4.0 0.0 2.0 2.0 129 chrX 12442070 intron Pkcdelta + chrX 12442134 intron Pkcdelta + chrX 12442199 intron Pkcdelta + chrX_6_12440001 chrX_12440001 RAL-21 2391 chrX 12492983 12492988 chrX 13057296 13057301 4 564313 2.5 9.0 5.8 0.6 564318 chrX 12492983 intergenic Lsp1alpha + chrX 12775142 3` UTR CG32647 - chrX 13057301 intron rad + chrX_4_12775001 chrX_12775001 RAL-21 2392 chrX 12511327 12511344 chrX 12511431 12511448 4 104 0.0 2.0 1.0 2.0 121 chrX 12511327 intron CG2556 + chrX 12511388 intron CG2556 + chrX 12511448 intron CG2556 + chrX_4_12510001 chrX_12510001 RAL-21 2393 chrX 12528849 12528865 chrX 12528945 12528961 4 96 5.0 1.5 3.2 1.0 112 chrX 12528849 intron CG43921 - chrX 12528905 intron CG43921 - chrX 12528961 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-21 2394 chrX 12557147 12557159 chrX 12557231 12557253 4 92 2.0 4.5 3.2 1.0 106 chrX 12557147 intron CG43921 - chrX 12557200 intron CG43921 - chrX 12557253 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-21 2395 chrX 12785411 12785443 chrX 12785508 12785540 11 96 5.5 5.5 5.5 1.7 129 chrX 12785411 intergenic Pde9 -,CG32647 - chrX 12785476 intergenic Pde9 - chrX 12785540 intergenic Pde9 - chrX_11_12785001 chrX_12785001 RAL-21 2396 chrX 12845407 12845428 chrX 12847082 12847103 7 1675 7.5 13.0 10.2 0.6 1696 chrX 12845407 intron Pde9 - chrX 12846255 intron Pde9 - chrX 12847103 intron Pde9 - chrX_7_12845001 chrX_12845001 RAL-21 2397 chrX 12858257 12858269 chrX 12858345 12858371 6 98 4.0 1.5 2.8 1.6 114 chrX 12858257 intron Pde9 - chrX 12858314 intron Pde9 - chrX 12858371 intron Pde9 - chrX_6_12855001 chrX_12855001 RAL-21 2398 chrX 12912615 12912658 chrX 12912732 12912771 4 116 0.5 3.0 1.8 1.4 156 chrX 12912615 5` UTR CR45625 + chrX 12912693 5` UTR CR45625 + chrX 12912771 5` UTR CR45625 + chrX_4_12910001 chrX_12910001 RAL-21 2399 chrX 12953874 12953906 chrX 12954032 12954064 6 158 2.5 3.5 3.0 1.5 190 chrX 12953874 intron hec - chrX 12953969 intron hec - chrX 12954064 intron hec - chrX_6_12950001 chrX_12950001 RAL-21 2400 chrX 13036991 13037036 chrX 13037092 13037137 9 99 3.5 2.5 3.0 2.2 146 chrX 13036991 intron rad + chrX 13037064 intron rad + chrX 13037137 intron rad + chrX_9_13035001 chrX_13035001 RAL-21 2401 chrX 13146579 13146629 chrX 13146687 13146737 19 107 3.5 3.5 3.5 4.2 158 chrX 13146579 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146737 intron CG32645 + chrX_19_13145001 chrX_13145001 RAL-21 2402 chrX 13172350 13172383 chrX 13172436 13172479 10 94 4.5 3.5 4.0 2.0 129 chrX 13172350 exon CG34411 - chrX 13172414 intron CG34411 - chrX 13172479 intron CG34411 - chrX_10_13170001 chrX_13170001 RAL-21 2403 chrX 13236892 13236901 chrX 13236972 13237006 6 98 0.0 4.0 2.0 2.0 114 chrX 13236892 intron mew - chrX 13236949 intron mew - chrX 13237006 intron mew - chrX_6_13235001 chrX_13235001 RAL-21 2404 chrX 13238082 13238102 chrX 13238179 13238199 7 97 0.0 3.0 1.5 2.8 117 chrX 13238082 intron mew - chrX 13238140 intron mew - chrX 13238199 intron mew - chrX_7_13235001 chrX_13235001 RAL-21 2405 chrX 13271276 13271287 chrX 13271391 13271402 8 114 5.0 7.0 6.0 1.1 126 chrX 13271276 intron HDAC4 - chrX 13271339 intron HDAC4 - chrX 13271402 intron HDAC4 - chrX_8_13270001 chrX_13270001 RAL-21 2406 chrX 13278131 13278174 chrX 13278233 13278277 11 103 7.5 1.5 4.5 2.0 146 chrX 13278131 intron HDAC4 - chrX 13278204 intron HDAC4 - chrX 13278277 intron HDAC4 - chrX_11_13275001 chrX_13275001 RAL-21 2407 chrX 13341087 13341104 chrX 13341280 13341302 6 198 7.5 0.5 4.0 1.2 215 chrX 13341087 intergenic CG15747 + chrX 13341194 intergenic CG15747 + chrX 13341302 intergenic CG15747 + chrX_6_13340001 chrX_13340001 RAL-21 2408 chrX 13341117 13341132 chrX 13341277 13341307 4 178 4.0 0.5 2.2 1.2 190 chrX 13341117 intergenic CG15747 + chrX 13341212 intergenic CG15747 + chrX 13341307 intergenic CG15747 + chrX_4_13340001 chrX_13340001 RAL-21 2409 chrX 13374819 13374870 chrX 13374919 13374968 13 99 2.0 3.5 2.8 3.4 149 chrX 13374819 intron CG1640 + chrX 13374894 intron CG1640 + chrX 13374968 intron CG1640 + chrX_13_13370001 chrX_13370001 RAL-21 2410 chrX 13401465 13401511 chrX 13401836 13401883 jockey 7 372 1.5 1.5 1.5 2.8 418 chrX 13401465 intergenic CG1673 +,CG12725 - chrX 13401674 intergenic CG12725 -,CG1673 + chrX 13401883 3` UTR CG12725 - chrX_7_13400001 chrX_13400001 RAL-21 2411 chrX 13409160 13409203 chrX 13409266 13409308 16 105 4.0 3.5 3.8 3.3 148 chrX 13409160 3` UTR GstT4 + chrX 13409234 3` UTR GstT4 + chrX 13409308 3` UTR GstT4 + chrX_16_13405001 chrX_13405001 RAL-21 2412 chrX 13429453 13429466 chrX 13430622 13430635 jockey 4 1169 5.5 4.5 5.0 0.7 1182 chrX 13429453 intergenic not near genes chrX 13430044 intergenic not near genes chrX 13430635 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-21 2413 chrX 13429468 13429493 chrX 13430618 13430655 jockey 9 1162 3.0 4.0 3.5 2.0 1187 chrX 13429468 intergenic not near genes chrX 13430062 intergenic not near genes chrX 13430655 intergenic not near genes chrX_9_13430001 chrX_13430001 RAL-21 2414 chrX 13463627 13463676 chrX 13469223 13469273 mdg3 12 5597 1.0 3.5 2.2 3.8 5646 chrX 13463627 intron Neto + chrX 13466450 intron Neto + chrX 13469273 intron Neto + chrX_12_13465001 chrX_13465001 RAL-21 2415 chrX 13485677 13485715 chrX 13485776 13485814 5 96 2.5 1.5 2.0 1.7 137 chrX 13485677 intron Neto + chrX 13485746 intron Neto + chrX 13485814 intron Neto + chrX_5_13485001 chrX_13485001 RAL-21 2416 chrX 13563405 13563435 chrX 13563505 13563535 4 100 2.0 1.5 1.8 1.4 130 chrX 13563405 intergenic CG32633 +,Tango13 + chrX 13563470 intergenic CG32633 +,Tango13 + chrX 13563535 intergenic CG32633 +,Tango13 + chrX_4_13560001 chrX_13560001 RAL-21 2417 chrX 13934276 13934318 chrX 13934379 13934421 11 103 4.0 3.0 3.5 2.4 145 chrX 13934276 intron mamo - chrX 13934348 intron mamo - chrX 13934421 intron mamo - chrX_11_13930001 chrX_13930001 RAL-21 2418 chrX 13937977 13937998 chrX 13941251 13941282 I-element 5 3282 4.5 2.5 3.5 1.1 3305 chrX 13937977 intron mamo - chrX 13939630 intron mamo - chrX 13941282 intron mamo - chrX_5_13935001 chrX_13935001 RAL-21 2419 chrX 13975874 13975903 chrX 13975971 13976000 6 97 0.5 2.5 1.5 2.4 126 chrX 13975874 intron mamo - chrX 13975937 intron mamo - chrX 13976000 intron mamo - chrX_6_13975001 chrX_13975001 RAL-21 2420 chrX 14157573 14157595 chrX 14163250 14163272 297 4 5677 5.0 1.5 3.2 1.0 5699 chrX 14157573 intergenic not near genes chrX 14160422 intergenic not near genes chrX 14163272 intergenic not near genes chrX_4_14160001 chrX_14160001 RAL-21 2421 chrX 14209457 14209489 chrX 14209563 14209600 7 108 5.0 5.5 5.2 1.1 143 chrX 14209457 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209528 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209600 intron,intron l(1)G0007 +,l(1)G0469 - chrX_7_14205001 chrX_14205001 RAL-21 2422 chrX 14414198 14414249 chrX 14414295 14414345 8 97 3.0 0.0 1.5 3.2 147 chrX 14414198 intron dpr8 + chrX 14414272 intron dpr8 + chrX 14414345 intron dpr8 + chrX_8_14410001 chrX_14410001 RAL-21 2423 chrX 14416293 14416332 chrX 14421081 14421119 F-element 6 4788 5.0 7.0 6.0 0.9 4826 chrX 14416293 intron dpr8 + chrX 14418706 intron dpr8 + chrX 14421119 intron dpr8 + chrX_6_14415001 chrX_14415001 RAL-21 2424 chrX 14484961 14484972 chrX 14485070 14485081 7 108 0.0 3.5 1.8 2.5 120 chrX 14484961 intergenic not near genes chrX 14485021 intergenic not near genes chrX 14485081 intergenic not near genes chrX_7_14485001 chrX_14485001 RAL-21 2425 chrX 14561596 14561624 chrX 14562120 14562176 5 536 2.5 3.0 2.8 1.3 580 chrX 14561596 intergenic not near genes chrX 14561886 intergenic not near genes chrX 14562176 intergenic not near genes chrX_5_14560001 chrX_14560001 RAL-21 2426 chrX 14572865 14572907 chrX 14572973 14572996 5 101 3.0 1.5 2.2 1.6 131 chrX 14572865 intergenic not near genes chrX 14572930 intergenic not near genes chrX 14572996 intergenic not near genes chrX_5_14570001 chrX_14570001 RAL-21 2427 chrX 14636459 14636491 chrX 14641905 14641952 I-element 6 5454 2.0 0.0 1.0 3.0 5493 chrX 14636459 intron NetA - chrX 14639206 intron NetA - chrX 14641952 intron NetA - chrX_6_14635001 chrX_14635001 RAL-21 2428 chrX 14714028 14714061 chrX 14714130 14714163 10 100 2.0 3.5 2.8 2.6 135 chrX 14714028 intron NetB - chrX 14714096 intron NetB - chrX 14714163 intron NetB - chrX_10_14710001 chrX_14710001 RAL-21 2429 chrX 14778021 14778051 chrX 14782835 14782868 Doc 8 4816 6.5 5.5 6.0 1.1 4847 chrX 14778021 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782868 intergenic Ag5r2 - chrX_8_14780001 chrX_14780001 RAL-21 2430 chrX 14816908 14816949 chrX 14817006 14817047 8 98 3.5 4.5 4.0 1.6 139 chrX 14816908 intron rut - chrX 14816978 intron rut - chrX 14817047 intron rut - chrX_8_14815001 chrX_14815001 RAL-21 2431 chrX 14818748 14818792 chrX 14823971 14824014 copia 8 5220 3.0 4.5 3.8 1.7 5266 chrX 14818748 intron rut - chrX 14821381 intron rut - chrX 14824014 intron rut - chrX_8_14820001 chrX_14820001 RAL-21 2432 chrX 14903321 14903331 chrX 14903422 14903431 6 101 3.5 2.0 2.8 1.6 110 chrX 14903321 intron,intron Flo2 +,CG9512 - chrX 14903376 intron,intron Flo2 +,CG9512 - chrX 14903431 intron,intron Flo2 +,CG9512 - chrX_6_14900001 chrX_14900001 RAL-21 2433 chrX 14936849 14936885 chrX 14946126 14946162 roo 7 9277 6.5 4.5 5.5 1.1 9313 chrX 14936849 intron pdgy - chrX 14941506 intron pdgy - chrX 14946162 intron pdgy - chrX_7_14940001 chrX_14940001 RAL-21 2434 chrX 14968059 14968100 chrX 14968153 14968199 6 98 0.0 3.5 1.8 2.1 140 chrX 14968059 intron eag + chrX 14968129 intron eag + chrX 14968199 intron eag + chrX_6_14965001 chrX_14965001 RAL-21 2435 chrX 15199696 15199738 chrX 15199804 15199845 9 106 2.0 4.0 3.0 2.2 149 chrX 15199696 intergenic not near genes chrX 15199770 intergenic not near genes chrX 15199845 intergenic not near genes chrX_9_15195001 chrX_15195001 RAL-21 2436 chrX 15273707 15273737 chrX 15274882 15274894 1360 6 1178 1.5 4.0 2.8 1.6 1187 chrX 15273707 intergenic not near genes chrX 15274300 intergenic not near genes chrX 15274894 intergenic not near genes chrX_6_15270001 chrX_15270001 RAL-21 2437 chrX 15358287 15358340 chrX 15358395 15358448 15 108 3.0 3.5 3.2 3.6 161 chrX 15358287 intron acj6 - chrX 15358368 intron acj6 - chrX 15358448 intron acj6 - chrX_15_15355001 chrX_15355001 RAL-21 2438 chrX 15413049 15413080 chrX 15417349 15417402 Juan 6 4310 3.0 1.5 2.2 1.9 4353 chrX 15413049 intron Cngl - chrX 15415226 intron Cngl - chrX 15417402 intron Cngl - chrX_6_15415001 chrX_15415001 RAL-21 2439 chrX 15421910 15421945 chrX 15423435 15423475 pogo 5 1530 3.0 3.0 3.0 1.2 1565 chrX 15421910 intron Cngl - chrX 15422692 intron Cngl - chrX 15423475 intron Cngl - chrX_5_15420001 chrX_15420001 RAL-21 2440 chrX 15561982 15561992 chrX 15562108 15562120 5 128 4.5 3.5 4.0 1.0 138 chrX 15561982 intergenic not near genes chrX 15562051 intergenic not near genes chrX 15562120 intergenic not near genes chrX_5_15560001 chrX_15560001 RAL-21 2441 chrX 15565615 15565662 chrX 15565721 15565768 12 106 4.0 2.0 3.0 3.0 153 chrX 15565615 intergenic not near genes chrX 15565692 intergenic not near genes chrX 15565768 intergenic not near genes chrX_12_15565001 chrX_15565001 RAL-21 2442 chrX 15678021 15678066 chrX 15678119 15678133 5 91 1.5 2.5 2.0 1.7 112 chrX 15678021 intergenic CG12708 + chrX 15678077 intergenic CG12708 + chrX 15678133 intergenic CG12708 + chrX_5_15675001 chrX_15675001 RAL-21 2443 chrX 15934401 15934454 chrX 15934504 15934557 18 102 5.5 3.0 4.2 3.5 156 chrX 15934401 intergenic Stim - chrX 15934479 intergenic Stim - chrX 15934557 3` UTR Stim - chrX_18_15930001 chrX_15930001 RAL-21 2444 chrX 15939253 15939303 chrX 15939358 15939395 7 103 1.5 3.5 2.5 2.0 142 chrX 15939253 intron Stim - chrX 15939324 intron Stim - chrX 15939395 intron Stim - chrX_7_15935001 chrX_15935001 RAL-21 2445 chrX 16004387 16004433 chrX 16004493 16004539 10 104 4.5 3.5 4.0 2.0 152 chrX 16004387 intron vap - chrX 16004463 intron vap - chrX 16004539 intron vap - chrX_10_16000001 chrX_16000001 RAL-21 2446 chrX 16129580 16129592 chrX 16129686 16129698 5 105 0.5 4.0 2.2 1.6 118 chrX 16129580 intron disco-r - chrX 16129639 intron disco-r - chrX 16129698 intron disco-r - chrX_5_16125001 chrX_16125001 RAL-21 2447 chrX 16222761 16222807 chrX 16231126 16231177 roo 13 8364 1.5 2.0 1.8 4.6 8416 chrX 16222761 intergenic not near genes chrX 16226969 intergenic not near genes chrX 16231177 intergenic not near genes chrX_13_16225001 chrX_16225001 RAL-21 2448 chrX 16295506 16295530 chrX 16295610 16295634 5 104 8.0 0.0 4.0 1.0 128 chrX 16295506 intron CG9911 - chrX 16295570 intron CG9911 - chrX 16295634 intron CG9911 - chrX_5_16295001 chrX_16295001 RAL-21 2449 chrX 16340647 16340697 chrX 16349824 16349874 roo 13 9177 3.5 5.5 4.5 2.4 9227 chrX 16340647 intergenic Dsp1 + chrX 16345260 intergenic not near genes chrX 16349874 intergenic sl + chrX_13_16345001 chrX_16345001 RAL-21 2450 chrX 16437584 16437622 chrX 16437691 16437694 8 102 2.5 1.0 1.8 2.9 110 chrX 16437584 3` UTR,3` UTR hang +,CG9947 - chrX 16437639 3` UTR,3` UTR hang +,CG9947 - chrX 16437694 3` UTR,3` UTR hang +,CG9947 - chrX_8_16435001 chrX_16435001 RAL-21 2451 chrX 16476569 16476616 chrX 16476665 16476667 7 84 3.5 3.0 3.2 1.7 98 chrX 16476569 intron para - chrX 16476618 intron para - chrX 16476667 intron para - chrX_7_16475001 chrX_16475001 RAL-21 2452 chrX 16492625 16492673 chrX 16498222 16498270 mdg3 11 5597 4.5 2.0 3.2 2.6 5645 chrX 16492625 intron para - chrX 16495448 intron para - chrX 16498270 exon para - chrX_11_16495001 chrX_16495001 RAL-21 2453 chrX 16650914 16650931 chrX 16651011 16651028 6 97 8.0 0.0 4.0 1.2 114 chrX 16650914 intergenic CG32573 +,CG42512 + chrX 16650971 intergenic CG32573 +,CG42512 + chrX 16651028 intergenic CG32573 +,CG42512 + chrX_6_16650001 chrX_16650001 RAL-21 2454 chrX 16689605 16689648 chrX 16689711 16689734 7 93 2.0 1.0 1.5 2.8 129 chrX 16689605 intron Sep4 - chrX 16689670 intron Sep4 - chrX 16689734 intron Sep4 - chrX_7_16685001 chrX_16685001 RAL-21 2455 chrX 16785262 16785306 chrX 16785386 16785427 12 124 2.5 3.0 2.8 3.2 165 chrX 16785262 3` UTR CG9609 - chrX 16785344 3` UTR CG9609 - chrX 16785427 3` UTR CG9609 - chrX_12_16785001 chrX_16785001 RAL-21 2456 chrX 16833188 16833224 chrX 16833293 16833299 8 101 0.5 5.0 2.8 2.1 111 chrX 16833188 intron CG13004 - chrX 16833244 intron CG13004 - chrX 16833299 intron CG13004 - chrX_8_16830001 chrX_16830001 RAL-21 2457 chrX 16870060 16870094 chrX 16870162 16870193 6 100 2.5 3.0 2.8 1.6 133 chrX 16870060 intron CG13003 - chrX 16870126 intron CG13003 - chrX 16870193 intron CG13003 - chrX_6_16870001 chrX_16870001 RAL-21 2458 chrX 16943677 16943718 chrX 16943781 16943822 8 104 3.0 4.0 3.5 1.8 145 chrX 16943677 5` UTR RhoGAP15B + chrX 16943750 5` UTR RhoGAP15B + chrX 16943822 5` UTR RhoGAP15B + chrX_8_16940001 chrX_16940001 RAL-21 2459 chrX 1053117 1053123 chrX 16983076 16983076 5 15929958 8.5 5.5 7.0 0.6 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-21 2460 chrX 17011955 17011986 chrX 17012057 17012071 5 99 1.5 3.5 2.5 1.4 116 chrX 17011955 intron CG45002 - chrX 17012013 intron CG45002 - chrX 17012071 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-21 2461 chrX 17057924 17057965 chrX 17058185 17058226 pogo 8 258 2.0 2.5 2.2 2.5 302 chrX 17057924 intron CG45002 - chrX 17058075 intron CG45002 - chrX 17058226 intron CG45002 - chrX_8_17055001 chrX_17055001 RAL-21 2462 chrX 17061574 17061596 chrX 17061692 17061719 7 129 2.5 0.5 1.5 2.8 145 chrX 17061574 intron CG45002 - chrX 17061646 intron CG45002 - chrX 17061719 intron CG45002 - chrX_7_17060001 chrX_17060001 RAL-21 2463 chrX 17110335 17110337 chrX 17110477 17110479 5 142 0.0 10.5 5.2 0.8 144 chrX 17110335 intron CG5004 + chrX 17110407 intron CG5004 + chrX 17110479 intron CG5004 + chrX_5_17110001 chrX_17110001 RAL-21 2464 chrX 17195189 17195229 chrX 17200295 17200330 flea 14 5103 3.5 4.0 3.8 2.9 5141 chrX 17195189 3` UTR baz + chrX 17197760 3` UTR baz + chrX 17200330 3` UTR baz + chrX_14_17195001 chrX_17195001 RAL-21 2465 chrX 17282862 17282911 chrX 17282960 17282982 11 87 1.5 1.0 1.2 5.0 120 chrX 17282862 intron CG5445 + chrX 17282922 5` UTR CG5445 + chrX 17282982 intron CG5445 + chrX_11_17280001 chrX_17280001 RAL-21 2466 chrX 17290050 17290097 chrX 17290146 17290193 17 95 3.0 3.0 3.0 4.2 143 chrX 17290050 intron,intron CG5445 +,Fim - chrX 17290122 intron,intron CG5445 +,Fim - chrX 17290193 intron,intron CG5445 +,Fim - chrX_17_17290001 chrX_17290001 RAL-21 2467 chrX 17303595 17303603 chrX 17303690 17303699 4 96 2.5 2.0 2.2 1.2 104 chrX 17303595 intron CG5445 + chrX 17303647 intron CG5445 + chrX 17303699 intron CG5445 + chrX_4_17300001 chrX_17300001 RAL-21 2468 chrX 17316359 17316391 chrX 17316456 17316463 6 98 2.0 0.0 1.0 3.0 104 chrX 17316359 intron B-H2 + chrX 17316411 intron B-H2 + chrX 17316463 intron B-H2 + chrX_6_17315001 chrX_17315001 RAL-21 2469 chrX 17352576 17352618 chrX 17352690 17352741 9 120 0.5 1.5 1.0 4.5 165 chrX 17352576 intergenic not near genes chrX 17352658 intergenic not near genes chrX 17352741 intergenic not near genes chrX_9_17350001 chrX_17350001 RAL-21 2470 chrX 17362472 17362503 chrX 17362584 17362615 4 112 5.0 2.0 3.5 0.9 143 chrX 17362472 intergenic not near genes chrX 17362544 intergenic not near genes chrX 17362615 intergenic not near genes chrX_4_17360001 chrX_17360001 RAL-21 2471 chrX 17502329 17502369 chrX 17502429 17502469 9 99 3.5 2.5 3.0 2.2 140 chrX 17502329 intron CG43658 - chrX 17502399 intron CG43658 - chrX 17502469 intron CG43658 - chrX_9_17500001 chrX_17500001 RAL-21 2472 chrX 17545001 17545028 chrX 17545103 17545127 8 102 5.0 3.0 4.0 1.6 126 chrX 17545001 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545127 intron CG43658 - chrX_8_17545001 chrX_17545001 RAL-21 2473 chrX 17741324 17741371 chrX 17741490 17741537 6 166 0.0 4.0 2.0 2.0 213 chrX 17741324 intron CG42684 + chrX 17741430 intron CG42684 + chrX 17741537 intron CG42684 + chrX_6_17740001 chrX_17740001 RAL-21 2474 chrX 17911865 17911868 chrX 17911945 17911976 4 101 1.0 3.0 2.0 1.3 111 chrX 17911865 intron CG6847 + chrX 17911920 intron CG6847 + chrX 17911976 intron CG6847 + chrX_4_17910001 chrX_17910001 RAL-21 2475 chrX 17968873 17968923 chrX 17969012 17969061 9 138 5.0 3.5 4.2 1.7 188 chrX 17968873 intron Sh - chrX 17968967 intron Sh - chrX 17969061 intron Sh - chrX_9_17965001 chrX_17965001 RAL-21 2476 chrX 17972189 17972240 chrX 17972574 17972626 5 380 3.0 2.5 2.8 1.3 437 chrX 17972189 intron Sh - chrX 17972408 intron Sh - chrX 17972626 intron Sh - chrX_5_17970001 chrX_17970001 RAL-21 2477 chrX 18020822 18020842 chrX 18020904 18020949 10 104 2.5 6.0 4.2 1.9 127 chrX 18020822 intron Sh - chrX 18020886 intron Sh - chrX 18020949 intron Sh - chrX_10_18020001 chrX_18020001 RAL-21 2478 chrX 18122798 18122847 chrX 18122894 18122943 11 93 2.5 4.0 3.2 2.6 145 chrX 18122798 5` UTR CR45606 + chrX 18122870 5` UTR CR45606 + chrX 18122943 intergenic CR45606 + chrX_11_18120001 chrX_18120001 RAL-21 2479 chrX 18127918 18127957 chrX 18128023 18128051 5 103 1.5 0.0 0.8 2.8 133 chrX 18127918 intergenic mir-210 + chrX 18127984 intergenic mir-210 + chrX 18128051 intergenic mir-210 + chrX_5_18125001 chrX_18125001 RAL-21 2480 chrX 18177007 18177046 chrX 18177120 18177154 4 112 2.0 1.5 1.8 1.4 147 chrX 18177007 intergenic not near genes chrX 18177080 intergenic not near genes chrX 18177154 intergenic Frq2 + chrX_4_18175001 chrX_18175001 RAL-21 2481 chrX 18194050 18194075 chrX 18194604 18194630 BS 5 555 3.5 3.5 3.5 1.1 580 chrX 18194050 intron Frq2 + chrX 18194340 intron Frq2 + chrX 18194630 intron Frq2 + chrX_5_18190001 chrX_18190001 RAL-21 2482 chrX 18194076 18194104 chrX 18194599 18194647 BS 8 547 1.0 2.5 1.8 2.9 571 chrX 18194076 intron Frq2 + chrX 18194362 intron Frq2 + chrX 18194647 intron Frq2 + chrX_8_18190001 chrX_18190001 RAL-21 2483 chrX 18218023 18218054 chrX 18218157 18218191 5 136 4.0 2.5 3.2 1.2 168 chrX 18218023 intron CG33639 - chrX 18218107 intron CG33639 - chrX 18218191 intron CG33639 - chrX_5_18215001 chrX_18215001 RAL-21 2484 chrX 18256451 18256480 chrX 18256586 18256621 4 140 0.0 0.5 0.2 3.3 170 chrX 18256451 intergenic CR45613 - chrX 18256536 intergenic CR45613 - chrX 18256621 3` UTR CR45613 - chrX_4_18255001 chrX_18255001 RAL-21 2485 chrX 18320490 18320499 chrX 18320642 18320651 5 152 0.0 4.5 2.2 1.6 161 chrX 18320490 intron CG6023 - chrX 18320570 intron CG6023 - chrX 18320651 intron CG6023 - chrX_5_18320001 chrX_18320001 RAL-21 2486 chrX 18337406 18337453 chrX 18337526 18337573 8 118 3.0 3.5 3.2 1.9 167 chrX 18337406 intron CG6123 - chrX 18337490 intron CG6123 - chrX 18337573 intron CG6123 - chrX_8_18335001 chrX_18335001 RAL-21 2487 chrX 18427365 18427406 chrX 18427796 18427837 9 431 2.5 0.0 1.2 4.1 472 chrX 18427365 intergenic CG42323 + chrX 18427601 intergenic not near genes chrX 18427837 intergenic not near genes chrX_9_18425001 chrX_18425001 RAL-21 2488 chrX 18429489 18429500 chrX 18434819 18434826 Transpac 6 5330 6.5 4.0 5.2 1.0 5337 chrX 18429489 intergenic not near genes chrX 18432158 intergenic not near genes chrX 18434826 intergenic not near genes chrX_6_18430001 chrX_18430001 RAL-21 2489 chrX 18429502 18429520 chrX 18434816 18434851 Transpac 5 5328 2.5 3.5 3.0 1.2 5349 chrX 18429502 intergenic not near genes chrX 18432176 intergenic not near genes chrX 18434851 intergenic not near genes chrX_5_18430001 chrX_18430001 RAL-21 2490 chrX 18440804 18440851 chrX 18440916 18440963 17 112 4.0 4.0 4.0 3.4 159 chrX 18440804 intergenic CG32548 - chrX 18440884 intergenic CG32548 - chrX 18440963 intergenic CG32548 - chrX_17_18440001 chrX_18440001 RAL-21 2491 chrX 18555378 18555406 chrX 18556919 18556927 transib2 7 1536 0.0 6.0 3.0 1.8 1549 chrX 18555378 intron Bx + chrX 18556152 intron Bx + chrX 18556927 intron Bx + chrX_7_18555001 chrX_18555001 RAL-21 2492 chrX 18644996 18645042 chrX 18645114 18645160 15 117 3.5 1.5 2.5 4.3 164 chrX 18644996 intron Rip11 - chrX 18645078 intron Rip11 - chrX 18645160 intron Rip11 - chrX_15_18645001 chrX_18645001 RAL-21 2493 chrX 18698838 18698878 chrX 18698975 18699015 8 137 6.0 7.0 6.5 1.1 177 chrX 18698838 intergenic not near genes chrX 18698926 intergenic not near genes chrX 18699015 intergenic not near genes chrX_8_18695001 chrX_18695001 RAL-21 2494 chrX 18896530 18896549 chrX 18896630 18896680 4 123 2.5 4.0 3.2 1.0 150 chrX 18896530 3` UTR CG7349 + chrX 18896605 intergenic CG7349 + chrX 18896680 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-21 2495 chrX 18947514 18947533 chrX 18947596 18947635 6 105 2.0 2.0 2.0 2.0 121 chrX 18947514 intron CG43759 + chrX 18947574 intron CG43759 + chrX 18947635 intron CG43759 + chrX_6_18945001 chrX_18945001 RAL-21 2496 chrX 18957052 18957086 chrX 18965737 18965771 roo 6 8684 3.0 1.5 2.2 1.9 8719 chrX 18957052 intron CG43759 + chrX 18961412 intron CG43759 + chrX 18965771 intron CG43759 + chrX_6_18960001 chrX_18960001 RAL-21 2497 chrX 19014374 19014382 chrX 19014438 19014473 4 87 2.5 5.5 4.0 0.8 99 chrX 19014374 intron CG43759 + chrX 19014424 intron CG43759 + chrX 19014473 intron CG43759 + chrX_4_19010001 chrX_19010001 RAL-21 2498 chrX 19020594 19020619 chrX 19020692 19020717 7 98 0.0 4.5 2.2 2.2 123 chrX 19020594 intron CG43759 + chrX 19020656 intron CG43759 + chrX 19020717 intron CG43759 + chrX_7_19020001 chrX_19020001 RAL-21 2499 chrX 19060396 19060437 chrX 19065200 19065241 Doc 11 4804 2.5 6.5 4.5 2.0 4845 chrX 19060396 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065241 intron CG14190 + chrX_11_19060001 chrX_19060001 RAL-21 2500 chrX 19073689 19073698 chrX 19073777 19073805 4 102 5.5 3.0 4.2 0.8 116 chrX 19073689 intergenic not near genes chrX 19073747 intergenic not near genes chrX 19073805 intergenic not near genes chrX_4_19070001 chrX_19070001 RAL-21 2501 chrX 19119682 19119707 chrX 19119788 19119813 5 106 4.0 0.0 2.0 1.7 131 chrX 19119682 intergenic not near genes chrX 19119748 intergenic not near genes chrX 19119813 intergenic not near genes chrX_5_19115001 chrX_19115001 RAL-21 2502 chrX 19136540 19136580 chrX 19143480 19143498 412 4 6934 1.0 0.5 0.8 2.2 6958 chrX 19136540 intergenic not near genes chrX 19140019 intergenic not near genes chrX 19143498 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-21 2503 chrX 19162682 19162688 chrX 19162764 19162785 4 92 2.5 2.0 2.2 1.2 103 chrX 19162682 intron RhoGAP18B - chrX 19162734 intron RhoGAP18B - chrX 19162785 intron RhoGAP18B - chrX_4_19160001 chrX_19160001 RAL-21 2504 chrX 19185512 19185567 chrX 19185628 19185683 4 113 0.0 2.5 1.2 1.8 171 chrX 19185512 intron CG33253 + chrX 19185598 intron CG33253 + chrX 19185683 intron CG33253 + chrX_4_19185001 chrX_19185001 RAL-21 2505 chrX 19320218 19320252 chrX 19320315 19320344 9 101 2.5 4.5 3.5 2.0 126 chrX 19320218 intron out - chrX 19320281 intron out - chrX 19320344 intron out - chrX_9_19320001 chrX_19320001 RAL-21 2506 chrX 19356979 19356985 chrX 19358440 19358446 NOF 4 1461 4.5 0.5 2.5 1.1 1467 chrX 19356979 intron kek5 + chrX 19357712 intron kek5 + chrX 19358446 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-21 2507 chrX 19356991 19357020 chrX 19358432 19358499 NOF 4 1460 3.0 0.5 1.8 1.4 1508 chrX 19356991 intron kek5 + chrX 19357745 intron kek5 + chrX 19358499 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-21 2508 chrX 19380167 19380184 chrX 19380428 19380445 pogo 6 261 3.0 9.0 6.0 0.9 278 chrX 19380167 intron kek5 + chrX 19380306 intron kek5 + chrX 19380445 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-21 2509 chrX 19560655 19560690 chrX 19560774 19560809 8 119 4.5 7.5 6.0 1.1 154 chrX 19560655 3` UTR Grip84 - chrX 19560732 3` UTR Grip84 - chrX 19560809 3` UTR Grip84 - chrX_8_19560001 chrX_19560001 RAL-21 2510 chrX 19593933 19593974 chrX 19594038 19594079 8 105 2.5 4.0 3.2 1.9 146 chrX 19593933 exon CG14205 + chrX 19594006 intron CG14205 + chrX 19594079 intron CG14205 + chrX_8_19590001 chrX_19590001 RAL-21 2511 chrX 19595716 19595739 chrX 19595823 19595848 10 109 3.5 2.5 3.0 2.5 132 chrX 19595716 intergenic CG14205 + chrX 19595782 intergenic CG14205 + chrX 19595848 intergenic CG14205 + chrX_10_19595001 chrX_19595001 RAL-21 2512 chrX 19662021 19662056 chrX 19662255 19662291 6 234 4.5 3.5 4.0 1.2 270 chrX 19662021 intron CG14223 - chrX 19662156 intron CG14223 - chrX 19662291 intron CG14223 - chrX_6_19660001 chrX_19660001 RAL-21 2513 chrX 19710064 19710086 chrX 19711868 19711892 S-element 6 1805 2.5 3.0 2.8 1.6 1828 chrX 19710064 intron meso18E - chrX 19710978 intron meso18E - chrX 19711892 intron meso18E - chrX_6_19710001 chrX_19710001 RAL-21 2514 chrX 19762565 19762601 chrX 19762665 19762701 13 100 3.5 2.5 3.0 3.2 136 chrX 19762565 5` UTR CG12702 - chrX 19762633 5` UTR CG12702 - chrX 19762701 5` UTR CG12702 - chrX_13_19760001 chrX_19760001 RAL-21 2515 chrX 19791240 19791278 chrX 19791354 19791392 11 114 4.0 3.0 3.5 2.4 152 chrX 19791240 intergenic not near genes chrX 19791316 intergenic not near genes chrX 19791392 intergenic not near genes chrX_11_19790001 chrX_19790001 RAL-21 2516 chrX 19855985 19855996 chrX 19856082 19856086 4 95 4.5 1.0 2.8 1.1 101 chrX 19855985 exon Nup205 + chrX 19856036 intron Nup205 + chrX 19856086 intron Nup205 + chrX_4_19855001 chrX_19855001 RAL-21 2517 chrX 19881443 19881484 chrX 19881539 19881546 14 92 2.5 1.5 2.0 4.7 103 chrX 19881443 intron Hers + chrX 19881494 intron Hers + chrX 19881546 intron Hers + chrX_14_19880001 chrX_19880001 RAL-21 2518 chrX 19971802 19971823 chrX 19971899 19971920 4 97 3.0 5.0 4.0 0.8 118 chrX 19971802 intergenic not near genes chrX 19971861 intergenic not near genes chrX 19971920 intergenic not near genes chrX_4_19970001 chrX_19970001 RAL-21 2519 chrX 19984373 19984410 chrX 19984674 19984711 8 296 0.5 1.0 0.8 4.4 338 chrX 19984373 intergenic not near genes chrX 19984542 intergenic not near genes chrX 19984711 intergenic not near genes chrX_8_19980001 chrX_19980001 RAL-21 2520 chrX 20041515 20041552 chrX 20041615 20041652 9 100 2.0 4.5 3.2 2.1 137 chrX 20041515 intron Dop2R - chrX 20041584 intron Dop2R - chrX 20041652 intron Dop2R - chrX_9_20040001 chrX_20040001 RAL-21 2521 chrX 20271504 20271525 chrX 20271613 20271637 7 109 3.0 0.0 1.5 2.8 133 chrX 20271504 intergenic not near genes chrX 20271570 intergenic not near genes chrX 20271637 intergenic not near genes chrX_7_20270001 chrX_20270001 RAL-21 2522 chrX 20312863 20312910 chrX 20312960 20313007 15 93 2.0 5.0 3.5 3.3 144 chrX 20312863 intron CG1504 - chrX 20312935 intron CG1504 - chrX 20313007 intron CG1504 - chrX_15_20310001 chrX_20310001 RAL-21 2523 chrX 20320292 20320300 chrX 20320389 20320392 5 96 2.0 2.0 2.0 1.7 100 chrX 20320292 intron CG1504 - chrX 20320342 intron CG1504 - chrX 20320392 intron CG1504 - chrX_5_20320001 chrX_20320001 RAL-21 2524 chrX 20371172 20371196 chrX 20371251 20371299 6 96 1.0 3.0 2.0 2.0 127 chrX 20371172 intergenic not near genes chrX 20371236 intergenic not near genes chrX 20371299 intergenic not near genes chrX_6_20370001 chrX_20370001 RAL-21 2525 chrX 20427117 20427137 chrX 20427264 20427284 7 146 41.0 34.0 37.5 0.2 167 chrX 20427117 intergenic CG15456 -,CG11710 - chrX 20427200 intergenic CG15456 -,CG11710 - chrX 20427284 intergenic CG11710 -,CG15456 - chrX_7_20425001 chrX_20425001 RAL-21 2526 chrX 20456638 20456682 chrX 20456760 20456804 9 122 5.0 2.5 3.8 1.9 166 chrX 20456638 intron CG32506 + chrX 20456721 intron CG32506 + chrX 20456804 intron CG32506 + chrX_9_20455001 chrX_20455001 RAL-21 2527 chrX 20468000 20468028 chrX 20468109 20468136 8 107 5.5 0.0 2.8 2.1 136 chrX 20468000 intron GstT3 + chrX 20468068 intron GstT3 + chrX 20468136 intron GstT3 + chrX_8_20465001 chrX_20465001 RAL-21 2528 chrX 20484391 20484405 chrX 20484510 20484530 4 121 4.0 4.5 4.2 0.8 139 chrX 20484391 intron RhoGAP19D - chrX 20484460 intron RhoGAP19D - chrX 20484530 intron RhoGAP19D - chrX_4_20480001 chrX_20480001 RAL-21 2529 chrX 20493913 20493929 chrX 20494090 20494110 5 180 0.0 7.5 3.8 1.0 197 chrX 20493913 intron RhoGAP19D - chrX 20494012 intron RhoGAP19D - chrX 20494110 intron RhoGAP19D - chrX_5_20490001 chrX_20490001 RAL-21 2530 chrX 20503319 20503368 chrX 20503439 20503488 13 120 4.5 3.0 3.8 2.7 169 chrX 20503319 intron RhoGAP19D - chrX 20503404 intron RhoGAP19D - chrX 20503488 intron RhoGAP19D - chrX_13_20500001 chrX_20500001 RAL-21 2531 chrX 20504108 20504155 chrX 20505648 20505694 transib2 7 1535 6.0 1.5 3.8 1.5 1586 chrX 20504108 intron RhoGAP19D - chrX 20504901 intron RhoGAP19D - chrX 20505694 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-21 2532 chrX 20528579 20528631 chrX 20528947 20528994 17 365 3.0 1.5 2.2 5.3 415 chrX 20528579 intergenic not near genes chrX 20528786 intergenic not near genes chrX 20528994 intergenic not near genes chrX_17_20525001 chrX_20525001 RAL-21 2533 chrX 20531741 20531790 chrX 20531860 20531909 8 119 2.0 3.5 2.8 2.1 168 chrX 20531741 intergenic not near genes chrX 20531825 intergenic not near genes chrX 20531909 intergenic not near genes chrX_8_20530001 chrX_20530001 RAL-21 2534 chrX 20546530 20546556 chrX 20546715 20546742 8 186 6.5 1.0 3.8 1.7 212 chrX 20546530 intron RunxB + chrX 20546636 intron RunxB + chrX 20546742 intron RunxB + chrX_8_20545001 chrX_20545001 RAL-21 2535 chrX 20559118 20559160 chrX 20559216 20559268 9 100 0.0 1.5 0.8 5.0 150 chrX 20559118 intron RunxB + chrX 20559193 intron RunxB + chrX 20559268 intron RunxB + chrX_9_20555001 chrX_20555001 RAL-21 2536 chrX 20570748 20570790 chrX 20570853 20570895 7 105 2.0 4.5 3.2 1.7 147 chrX 20570748 intergenic not near genes chrX 20570822 intergenic not near genes chrX 20570895 intergenic not near genes chrX_7_20570001 chrX_20570001 RAL-21 2537 chrX 20635426 20635440 chrX 20635612 20635626 4 186 2.5 5.0 3.8 0.8 200 chrX 20635426 intergenic not near genes chrX 20635526 intergenic not near genes chrX 20635626 intergenic not near genes chrX_4_20635001 chrX_20635001 RAL-21 2538 chrX 20713910 20713928 chrX 20714003 20714015 4 96 1.0 1.0 1.0 2.0 105 chrX 20713910 intergenic not near genes chrX 20713962 intergenic not near genes chrX 20714015 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-21 2539 chrX 20780209 20780233 chrX 20780454 20780478 6 245 0.5 1.5 1.0 3.0 269 chrX 20780209 intron,3` UTR shakB -,CG32507 - chrX 20780344 intron,3` UTR shakB -,CG32507 - chrX 20780478 intron,3` UTR shakB -,CG32507 - chrX_6_20780001 chrX_20780001 RAL-21 2540 chrX 20791538 20791553 chrX 20791658 20791668 4 119 4.0 3.0 3.5 0.9 130 chrX 20791538 intron shakB - chrX 20791603 intron shakB - chrX 20791668 intron shakB - chrX_4_20790001 chrX_20790001 RAL-21 2541 chrX 20836709 20836733 chrX 20844331 20844352 roo 4 7621 7.0 2.0 4.5 0.7 7643 chrX 20836709 intron shakB - chrX 20840530 intron shakB - chrX 20844352 intron shakB - chrX_4_20840001 chrX_20840001 RAL-21 2542 chrX 20836742 20836754 chrX 20844329 20844376 roo 5 7614 5.0 2.0 3.5 1.1 7634 chrX 20836742 intron shakB - chrX 20840559 intron shakB - chrX 20844376 intron shakB - chrX_5_20840001 chrX_20840001 RAL-21 2543 chrX 20940704 20940729 chrX 20942193 20942217 hobo 5 1489 3.0 3.5 3.2 1.2 1513 chrX 20940704 intergenic not near genes chrX 20941460 intergenic not near genes chrX 20942217 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-21 2544 chrX 20956991 20956994 chrX 20962452 20962456 I-element 5 5462 5.5 6.0 5.8 0.7 5465 chrX 20956991 intergenic not near genes chrX 20959724 intergenic not near genes chrX 20962456 intergenic Ser6 - chrX_5_20955001 chrX_20955001 RAL-21 2545 chrX 21014199 21014247 chrX 21014410 21014457 10 207 4.0 4.5 4.2 1.9 258 chrX 21014199 intergenic not near genes chrX 21014328 intergenic not near genes chrX 21014457 intergenic not near genes chrX_10_21010001 chrX_21010001 RAL-21 2546 chrX 21022219 21022315 chrX 21022408 21022491 7 187 0.0 0.0 0.0 7.0 272 chrX 21022219 intergenic not near genes chrX 21022355 intergenic not near genes chrX 21022491 intergenic not near genes chrX_7_21020001 chrX_21020001 RAL-21 2547 chrX 21029559 21029688 chrX 21029662 21029832 12 134 0.0 0.5 0.2 10.0 273 chrX 21029559 3` UTR CG1529 - chrX 21029696 3` UTR CG1529 - chrX 21029832 3` UTR CG1529 - chrX_12_21025001 chrX_21025001 RAL-21 2548 chrX 21061873 21061897 chrX 21062378 21062391 roo 9 503 3.5 7.5 5.5 1.4 518 chrX 21061873 intron bves + chrX 21062132 intron bves + chrX 21062391 intron,3` UTR bves +,CG32512 - chrX_9_21060001 chrX_21060001 RAL-21 2549 chrX 21076306 21076354 chrX 21076405 21076453 14 96 4.0 0.0 2.0 4.7 147 chrX 21076306 intron bves + chrX 21076380 intron bves + chrX 21076453 intron bves + chrX_14_21075001 chrX_21075001 RAL-21 2550 chrX 21086112 21086158 chrX 21087161 21087207 jockey 7 1049 3.5 4.0 3.8 1.5 1095 chrX 21086112 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087207 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-21 2551 chrX 21088021 21088053 chrX 21088173 21088197 9 148 3.0 2.5 2.8 2.4 176 chrX 21088021 intergenic not near genes chrX 21088109 intergenic not near genes chrX 21088197 intergenic not near genes chrX_9_21085001 chrX_21085001 RAL-21 2552 chrX 21097729 21097775 chrX 21097825 21097871 10 96 2.5 3.5 3.0 2.5 142 chrX 21097729 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 21097800 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX 21097871 intron,intron,intron CG11566 +,stg1 +,CG15446 - chrX_10_21095001 chrX_21095001 RAL-21 2553 chrX 21197061 21197085 chrX 21197134 21197183 5 86 2.0 4.5 3.2 1.2 122 chrX 21197061 intergenic not near genes chrX 21197122 intergenic not near genes chrX 21197183 intergenic not near genes chrX_5_21195001 chrX_21195001 RAL-21 2554 chrX 21254617 21254629 chrX 21254726 21254728 4 106 5.0 0.5 2.8 1.1 111 chrX 21254617 intron CG32521 - chrX 21254672 intron CG32521 - chrX 21254728 intron CG32521 - chrX_4_21250001 chrX_21250001 RAL-21 2555 chrX 21268043 21268060 chrX 21268155 21268172 5 112 1.0 0.0 0.5 3.3 129 chrX 21268043 intron CG32521 - chrX 21268108 intron CG32521 - chrX 21268172 intron CG32521 - chrX_5_21265001 chrX_21265001 RAL-21 2556 chrX 21328101 21328139 chrX 21328232 21328270 16 130 5.5 0.5 3.0 4.0 169 chrX 21328101 3` UTR CG1486 + chrX 21328186 intergenic CG1486 +,tty - chrX 21328270 intergenic CG1486 +,tty - chrX_16_21325001 chrX_21325001 RAL-21 2557 chrX 21358056 21358087 chrX 21358156 21358179 9 96 7.5 2.0 4.8 1.6 123 chrX 21358056 intergenic sol +,Sep1 + chrX 21358118 intergenic Sep1 +,sol + chrX 21358179 intergenic Sep1 +,sol + chrX_9_21355001 chrX_21355001 RAL-21 2558 chrX 21388520 21388525 chrX 21388624 21388629 4 104 6.0 0.0 3.0 1.0 109 chrX 21388520 intergenic mst + chrX 21388574 intergenic mst + chrX 21388629 intergenic mst + chrX_4_21385001 chrX_21385001 RAL-21 2559 chrX 21419194 21419239 chrX 21419299 21419344 9 104 4.0 2.0 3.0 2.2 150 chrX 21419194 intergenic not near genes chrX 21419269 intergenic not near genes chrX 21419344 intergenic not near genes chrX_9_21415001 chrX_21415001 RAL-21 2560 chrX 21443464 21443478 chrX 21443655 21443676 4 196 2.5 3.5 3.0 1.0 212 chrX 21443464 intron CG42343 - chrX 21443570 intron CG42343 - chrX 21443676 intron CG42343 - chrX_4_21440001 chrX_21440001 RAL-21 2561 chrX 21455205 21455240 chrX 21455403 21455445 6 205 2.0 0.0 1.0 3.0 240 chrX 21455205 intron CG42343 - chrX 21455325 intron CG42343 - chrX 21455445 intron CG42343 - chrX_6_21455001 chrX_21455001 RAL-21 2562 chrX 21458683 21458718 chrX 21464139 21464173 Ivk 9 5456 4.5 6.5 5.5 1.4 5490 chrX 21458683 intergenic not near genes chrX 21461428 intergenic not near genes chrX 21464173 intergenic not near genes chrX_9_21460001 chrX_21460001 RAL-21 2563 chrX 21516985 21517018 chrX 21517084 21517117 6 90 5.0 4.5 4.8 1.0 132 chrX 21516985 intron CR45082 - chrX 21517051 intron CR45082 - chrX 21517117 intron CR45082 - chrX_6_21515001 chrX_21515001 RAL-21 2564 chrX 21565403 21565434 chrX 21565497 21565532 10 98 2.0 2.5 2.2 3.1 129 chrX 21565403 intergenic not near genes chrX 21565468 intergenic not near genes chrX 21565532 intergenic not near genes chrX_10_21565001 chrX_21565001 RAL-21 2565 chrX 21573870 21573911 chrX 21573977 21574018 9 107 3.0 2.0 2.5 2.6 148 chrX 21573870 intergenic not near genes chrX 21573944 intergenic not near genes chrX 21574018 intergenic not near genes chrX_9_21570001 chrX_21570001 RAL-21 2566 chrX 21575523 21575556 chrX 21575621 21575655 10 97 5.5 3.0 4.2 1.9 132 chrX 21575523 intergenic not near genes chrX 21575589 intergenic not near genes chrX 21575655 intergenic not near genes chrX_10_21575001 chrX_21575001 RAL-21 2567 chrX 21581116 21581143 chrX 21581216 21581243 5 99 0.0 2.0 1.0 2.5 127 chrX 21581116 intergenic not near genes chrX 21581180 intergenic not near genes chrX 21581243 intergenic not near genes chrX_5_21580001 chrX_21580001 RAL-21 2568 chrX 21668239 21668287 chrX 21668344 21668390 19 103 2.0 0.5 1.2 8.6 151 chrX 21668239 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668390 intergenic not near genes chrX_19_21665001 chrX_21665001 RAL-21 2569 chrX 22478851 22478896 chrX 22479004 22479049 16 152 3.0 1.5 2.2 5.0 198 chrX 22478851 intron CG12576 - chrX 22478950 intron CG12576 - chrX 22479049 intron CG12576 - chrX_16_22475001 chrX_22475001 RAL-21 2570 chrX 22519288 22519327 chrX 22519443 22519482 12 153 1.0 1.5 1.2 5.5 194 chrX 22519288 intron CG17600 + chrX 22519385 intron CG17600 + chrX 22519482 intron CG17600 + chrX_12_22515001 chrX_22515001 RAL-21 2571 chrX 22564556 22564584 chrX 22575113 22575137 jockey 5 10554 9.5 9.5 9.5 0.5 10581 chrX 22564556 intergenic not near genes chrX 22569846 intergenic not near genes chrX 22575137 intergenic not near genes chrX_5_22565001 chrX_22565001 RAL-21 2572 chrX 22585504 22585509 chrX 22585607 22585612 4 103 4.5 4.0 4.2 0.8 108 chrX 22585504 intron Cda4 - chrX 22585558 intron Cda4 - chrX 22585612 intron Cda4 - chrX_4_22585001 chrX_22585001 RAL-21 2573 chrX 22586021 22586025 chrX 22644850 22644863 6 58832 10.0 6.5 8.2 0.7 58842 chrX 22586021 intron Cda4 - chrX 22615442 intron Cda4 - chrX 22644863 intergenic not near genes chrX_6_22615001 chrX_22615001 RAL-21 2574 chrX 22658141 22658176 chrX 22658326 22658366 7 187 0.5 2.0 1.2 3.2 225 chrX 22658141 intron CR44997 + chrX 22658254 intron CR44997 + chrX 22658366 intron CR44997 + chrX_7_22655001 chrX_22655001 RAL-21 2575 chrX 22658501 22658541 chrX 22658625 22658665 11 124 2.5 4.5 3.5 2.4 164 chrX 22658501 intron CR44997 + chrX 22658583 intron CR44997 + chrX 22658665 intron CR44997 + chrX_11_22655001 chrX_22655001 RAL-21 2576 chrX 22697483 22697515 chrX 22701800 22701816 Juan 8 4314 2.0 2.5 2.2 2.5 4333 chrX 22697483 intron CR44997 + chrX 22699650 intron CR44997 + chrX 22701816 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-21 2577 chrX 22771488 22771523 chrX 22774796 22774834 297 11 3308 3.0 1.5 2.2 3.4 3346 chrX 22771488 intron CR44997 + chrX 22773161 intron CR44997 + chrX 22774834 intron CR44997 + chrX_11_22770001 chrX_22770001 RAL-21 2578 chrX 22784059 22784088 chrX 22784162 22784191 7 101 2.0 3.5 2.8 1.8 132 chrX 22784059 intron CR44997 + chrX 22784125 intron CR44997 + chrX 22784191 intron CR44997 + chrX_7_22780001 chrX_22780001 RAL-21 2579 chrX 22811988 22812003 chrX 22816780 22816795 F-element 6 4791 3.0 2.0 2.5 1.7 4807 chrX 22811988 intergenic CG12446 - chrX 22814392 intergenic not near genes chrX 22816795 intergenic not near genes chrX_6_22810001 chrX_22810001 RAL-21 2580 chrX 22824243 22824438 chrX 22824369 22824591 12 150 3.0 3.5 3.2 2.9 348 chrX 22824243 intergenic fog - chrX 22824417 3` UTR fog - chrX 22824591 3` UTR fog - chrX_12_22820001 chrX_22820001 RAL-21 2581 chrX 22867957 22868007 chrX 22868091 22868149 10 134 0.0 0.0 0.0 10.0 192 chrX 22867957 exon CG42346 + chrX 22868053 intron CG42346 + chrX 22868149 intron CG42346 + chrX_10_22865001 chrX_22865001 RAL-21 2582 chrX 22967370 22967399 chrX 23154541 23154570 diver 5 187171 4.5 17.5 11.0 0.4 187200 chrX 22967370 intergenic not near genes chrX 23060970 intergenic not near genes chrX 23154570 intergenic not near genes chrX_5_23060001 chrX_23060001 RAL-21 2583 chrX 22987083 22987119 chrX 22989762 22989783 Burdock 8 2676 4.0 3.0 3.5 1.8 2700 chrX 22987083 intron,intron stnA -,stnB - chrX 22988433 intron,intron stnA -,stnB - chrX 22989783 intron,intron stnA -,stnB - chrX_8_22985001 chrX_22985001 RAL-21 2584 chrX 22992377 22992424 chrX 22992528 22992575 5 151 2.5 3.5 3.0 1.2 198 chrX 22992377 intron,intron stnA -,stnB - chrX 22992476 intron,intron stnA -,stnB - chrX 22992575 3` UTR,exon stnA -,stnB - chrX_5_22990001 chrX_22990001 RAL-21 2585 chrX 22996295 22996338 chrX 23003547 23003590 roo 9 7251 5.5 2.5 4.0 1.8 7295 chrX 22996295 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003590 intron,intron stnA -,stnB - chrX_9_22995001 chrX_22995001 RAL-21 2586 chrX 23036366 23036401 chrX 23037787 23037803 pogo 10 1419 2.0 3.5 2.8 2.6 1437 chrX 23036366 intron CG12061 + chrX 23037084 intron CG12061 + chrX 23037803 intron CG12061 + chrX_10_23035001 chrX_23035001 RAL-21 2587 chrX 23053465 23053474 chrX 23062404 23062413 diver 6 8939 4.0 4.0 4.0 1.2 8948 chrX 23053465 intergenic not near genes chrX 23057939 intergenic not near genes chrX 23062413 intergenic not near genes chrX_6_23055001 chrX_23055001 RAL-21 2588 chrY 864697 864741 chrY 864794 864837 4 96 16.5 16.5 16.5 0.2 140 chrY 864697 intergenic not near genes chrY 864767 intergenic not near genes chrY 864837 intergenic not near genes chrY_4_860001 chrY_860001 RAL-21 2589 chrY 1419882 1419917 chrY 1420156 1420186 5 273 6.0 2.0 4.0 1.0 304 chrY 1419882 intergenic not near genes chrY 1420034 intergenic not near genes chrY 1420186 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-21 2590 chrY 1420639 1420650 chrY 1420765 1420776 4 126 4.0 5.5 4.8 0.7 137 chrY 1420639 intergenic not near genes chrY 1420708 intergenic not near genes chrY 1420776 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-21