SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47444 47477 chr2L 52569 52602 jockey 8 5125 5.0 5.0 5.0 1.3 5158 chr2L 47444 intron Cda5 - chr2L 50023 intron Cda5 - chr2L 52602 intron Cda5 - chr2L_8_50001 chr2L_50001 RAL-177 2 chr2L 130261 130291 chr2L 136428 136448 7 6159 27.5 27.0 27.2 0.2 6187 chr2L 130261 intron,intron CG11455 +,CG3164 - chr2L 133354 intron,exon CG11455 +,Gs1 + chr2L 136448 intron,5` UTR CG11455 +,CR44186 + chr2L_7_130001 chr2L_130001 RAL-177 3 chr2L 263285 263315 chr2L 263451 263481 12 166 3.5 8.0 5.8 1.8 196 chr2L 263285 intron,3` UTR CG3645 -,CG17075 - chr2L 263383 intron,3` UTR CG3645 -,CG17075 - chr2L 263481 intron,3` UTR CG3645 -,CG17075 - chr2L_12_260001 chr2L_260001 RAL-177 4 chr2L 328215 328226 chr2L 328312 328323 5 97 12.5 11.5 12.0 0.4 108 chr2L 328215 intron,intron Plc21C +,CG43755 - chr2L 328269 intron,intron Plc21C +,CG43755 - chr2L 328323 intron,intron Plc21C +,CG43755 - chr2L_5_325001 chr2L_325001 RAL-177 5 chr2L 347865 347918 chr2L 355385 355437 blood 14 7514 3.5 3.0 3.2 3.3 7572 chr2L 347865 3` UTR Plc21C + chr2L 351651 intron Plc21C + chr2L 355437 3` UTR Plc21C + chr2L_14_350001 chr2L_350001 RAL-177 6 chr2L 371426 371455 chr2L 371525 371554 8 99 4.0 6.0 5.0 1.3 128 chr2L 371426 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371554 intergenic not near genes chr2L_8_370001 chr2L_370001 RAL-177 7 chr2L 489513 489567 chr2L 489618 489632 12 91 2.0 4.5 3.2 2.9 119 chr2L 489513 intron ush + chr2L 489572 intron ush + chr2L 489632 intron ush + chr2L_12_485001 chr2L_485001 RAL-177 8 chr2L 597376 597429 chr2L 597809 597852 14 424 6.0 0.5 3.2 3.3 476 chr2L 597376 intergenic not near genes chr2L 597614 intergenic not near genes chr2L 597852 intergenic not near genes chr2L_14_595001 chr2L_595001 RAL-177 9 chr2L 609281 609288 chr2L 609412 609424 4 134 14.5 2.0 8.2 0.4 143 chr2L 609281 intergenic CR43649 - chr2L 609352 intergenic CR43649 - chr2L 609424 intergenic CR43649 - chr2L_4_605001 chr2L_605001 RAL-177 10 chr2L 609290 609331 chr2L 609408 609422 14 119 5.5 2.0 3.8 2.9 132 chr2L 609290 intergenic CR43649 - chr2L 609356 intergenic CR43649 - chr2L 609422 intergenic CR43649 - chr2L_14_605001 chr2L_605001 RAL-177 11 chr2L 686913 686942 chr2L 695973 696002 roo 9 9059 2.5 8.5 5.5 1.4 9089 chr2L 686913 intron ds - chr2L 691458 intron ds - chr2L 696002 intron ds - chr2L_9_690001 chr2L_690001 RAL-177 12 chr2L 748185 748230 chr2L 748284 748328 18 97 2.0 6.5 4.2 3.5 143 chr2L 748185 intergenic not near genes chr2L 748256 intergenic not near genes chr2L 748328 intergenic not near genes chr2L_18_745001 chr2L_745001 RAL-177 13 chr2L 763584 763623 chr2L 763675 763711 8 86 1.0 5.0 3.0 2.0 127 chr2L 763584 intergenic not near genes chr2L 763648 intergenic not near genes chr2L 763711 intergenic not near genes chr2L_8_760001 chr2L_760001 RAL-177 14 chr2L 764535 764577 chr2L 764655 764697 14 118 5.5 3.0 4.2 2.7 162 chr2L 764535 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764697 intergenic not near genes chr2L_14_760001 chr2L_760001 RAL-177 15 chr2L 770448 770494 chr2L 772244 772244 Bari1 10 1788 3.5 0.5 2.0 3.3 1796 chr2L 770448 intergenic not near genes chr2L 771346 intergenic not near genes chr2L 772244 intergenic CR44614 + chr2L_10_770001 chr2L_770001 RAL-177 16 chr2L 795250 795291 chr2L 795370 795431 14 129 5.0 0.0 2.5 4.0 181 chr2L 795250 intergenic not near genes chr2L 795340 intergenic not near genes chr2L 795431 intergenic not near genes chr2L_14_795001 chr2L_795001 RAL-177 17 chr2L 849457 849474 chr2L 849568 849585 7 108 6.5 7.5 7.0 0.9 128 chr2L 849457 intron drongo - chr2L 849521 intron drongo - chr2L 849585 intron drongo - chr2L_7_845001 chr2L_845001 RAL-177 18 chr2L 849477 849480 chr2L 849565 849591 4 105 5.5 6.5 6.0 0.6 114 chr2L 849477 intron drongo - chr2L 849534 intron drongo - chr2L 849591 intron drongo - chr2L_4_845001 chr2L_845001 RAL-177 19 chr2L 877829 877878 chr2L 877930 877939 11 97 3.5 7.0 5.2 1.8 110 chr2L 877829 3` UTR,exon CG15824 -,ninaA + chr2L 877884 3` UTR,intron CG15824 -,ninaA + chr2L 877939 3` UTR,intron CG15824 -,ninaA + chr2L_11_875001 chr2L_875001 RAL-177 20 chr2L 938400 938450 chr2L 938571 938621 8 170 4.5 0.0 2.2 2.5 221 chr2L 938400 intron CG4341 + chr2L 938510 intron CG4341 + chr2L 938621 intron CG4341 + chr2L_8_935001 chr2L_935001 RAL-177 21 chr2L 964557 964574 chr2L 964661 964678 7 104 0.5 7.5 4.0 1.4 121 chr2L 964557 intergenic not near genes chr2L 964618 intergenic not near genes chr2L 964678 intergenic not near genes chr2L_7_960001 chr2L_960001 RAL-177 22 chr2L 976858 976870 chr2L 984514 984526 roo 5 7656 1.5 0.0 0.8 2.8 7668 chr2L 976858 intergenic not near genes chr2L 980692 intergenic not near genes chr2L 984526 intergenic not near genes chr2L_5_980001 chr2L_980001 RAL-177 23 chr2L 996704 996721 chr2L 1005819 1005836 roo 7 9115 4.0 5.5 4.8 1.2 9132 chr2L 996704 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005836 intergenic not near genes chr2L_7_1000001 chr2L_1000001 RAL-177 24 chr2L 1035540 1035589 chr2L 1035637 1035686 11 97 3.5 4.0 3.8 2.3 146 chr2L 1035540 intron IA-2 - chr2L 1035613 intron IA-2 - chr2L 1035686 intron IA-2 - chr2L_11_1035001 chr2L_1035001 RAL-177 25 chr2L 1042584 1042596 chr2L 1042695 1042707 7 111 0.0 0.0 0.0 7.0 123 chr2L 1042584 intron IA-2 - chr2L 1042646 intron IA-2 - chr2L 1042707 intron IA-2 - chr2L_7_1040001 chr2L_1040001 RAL-177 26 chr2L 1137646 1137683 chr2L 1137836 1137883 14 199 5.0 6.0 5.5 2.2 237 chr2L 1137646 intron CG4577 + chr2L 1137764 intron CG4577 + chr2L 1137883 intron CG4577 + chr2L_14_1135001 chr2L_1135001 RAL-177 27 chr2L 1156838 1156887 chr2L 1156963 1157012 8 125 3.0 2.0 2.5 2.3 174 chr2L 1156838 intron capt - chr2L 1156925 intron capt - chr2L 1157012 intron capt - chr2L_8_1155001 chr2L_1155001 RAL-177 28 chr2L 1220113 1220159 chr2L 1227599 1227645 blood 16 7485 5.5 7.5 6.5 2.1 7532 chr2L 1220113 intron CG42329 + chr2L 1223879 intron CG42329 + chr2L 1227645 intron CG42329 + chr2L_16_1220001 chr2L_1220001 RAL-177 29 chr2L 1261210 1261258 chr2L 1261311 1261347 8 97 0.0 2.5 1.2 3.6 137 chr2L 1261210 intron robo3 + chr2L 1261278 intron robo3 + chr2L 1261347 intron robo3 + chr2L_8_1260001 chr2L_1260001 RAL-177 30 chr2L 1320258 1320305 chr2L 1320356 1320403 19 90 1.0 3.5 2.2 5.9 145 chr2L 1320258 intergenic not near genes chr2L 1320330 intergenic not near genes chr2L 1320403 intergenic not near genes chr2L_19_1320001 chr2L_1320001 RAL-177 31 chr2L 1327057 1327108 chr2L 1327150 1327176 9 91 0.5 2.0 1.2 4.1 119 chr2L 1327057 intergenic not near genes chr2L 1327116 intergenic not near genes chr2L 1327176 intergenic not near genes chr2L_9_1325001 chr2L_1325001 RAL-177 32 chr2L 1331059 1331090 chr2L 1331156 1331187 8 95 2.5 1.0 1.8 2.9 128 chr2L 1331059 intergenic not near genes chr2L 1331123 intergenic not near genes chr2L 1331187 intergenic not near genes chr2L_8_1330001 chr2L_1330001 RAL-177 33 chr2L 1333721 1333762 chr2L 1333866 1333907 7 139 0.0 2.0 1.0 3.5 186 chr2L 1333721 intergenic CG5440 + chr2L 1333814 intergenic CG5440 + chr2L 1333907 intergenic CG5440 + chr2L_7_1330001 chr2L_1330001 RAL-177 34 chr2L 1399143 1399196 chr2L 1399285 1399338 18 142 0.0 3.5 1.8 6.4 195 chr2L 1399143 intron lea - chr2L 1399240 intron lea - chr2L 1399338 intron lea - chr2L_18_1395001 chr2L_1395001 RAL-177 35 chr2L 1457464 1457504 chr2L 1457611 1457653 12 148 0.5 4.0 2.2 3.8 189 chr2L 1457464 intergenic not near genes chr2L 1457558 intergenic not near genes chr2L 1457653 intergenic not near genes chr2L_12_1455001 chr2L_1455001 RAL-177 36 chr2L 1464155 1464177 chr2L 1464390 1464429 5 244 2.5 3.5 3.0 1.2 274 chr2L 1464155 intergenic not near genes chr2L 1464292 intergenic not near genes chr2L 1464429 intergenic not near genes chr2L_5_1460001 chr2L_1460001 RAL-177 37 chr2L 1467480 1467533 chr2L 1467580 1467633 17 99 5.5 3.5 4.5 3.1 153 chr2L 1467480 intergenic not near genes chr2L 1467556 intergenic not near genes chr2L 1467633 intergenic not near genes chr2L_17_1465001 chr2L_1465001 RAL-177 38 chr2L 1557129 1557168 chr2L 1557274 1557313 16 145 4.0 1.0 2.5 4.6 184 chr2L 1557129 intron haf + chr2L 1557221 intron haf + chr2L 1557313 intron haf + chr2L_16_1555001 chr2L_1555001 RAL-177 39 chr2L 1570676 1570714 chr2L 1573568 1573606 F-element 12 2892 5.0 3.5 4.2 2.3 2930 chr2L 1570676 intron haf + chr2L 1572141 intron haf + chr2L 1573606 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-177 40 chr2L 1591866 1591893 chr2L 1591955 1591997 9 102 4.0 5.0 4.5 1.6 131 chr2L 1591866 intron haf + chr2L 1591932 intron haf + chr2L 1591997 intron haf + chr2L_9_1590001 chr2L_1590001 RAL-177 41 chr2L 1634747 1634756 chr2L 1634852 1634861 6 105 4.0 10.0 7.0 0.8 114 chr2L 1634747 intergenic not near genes chr2L 1634804 intergenic not near genes chr2L 1634861 intergenic not near genes chr2L_6_1630001 chr2L_1630001 RAL-177 42 chr2L 1662001 1662028 chr2L 1662106 1662133 8 104 1.5 0.0 0.8 4.4 132 chr2L 1662001 intron chinmo + chr2L 1662067 intron chinmo + chr2L 1662133 intron chinmo + chr2L_8_1660001 chr2L_1660001 RAL-177 43 chr2L 1669131 1669159 chr2L 1669365 1669393 11 233 0.0 4.0 2.0 3.7 262 chr2L 1669131 intron chinmo + chr2L 1669262 intron chinmo + chr2L 1669393 intron chinmo + chr2L_11_1665001 chr2L_1665001 RAL-177 44 chr2L 1678957 1679003 chr2L 1686442 1686488 blood 14 7485 6.5 5.0 5.8 2.1 7531 chr2L 1678957 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686488 intron chinmo + chr2L_14_1680001 chr2L_1680001 RAL-177 45 chr2L 1687013 1687059 chr2L 1687106 1687148 14 92 4.0 2.0 3.0 3.5 135 chr2L 1687013 intron chinmo + chr2L 1687080 intron chinmo + chr2L 1687148 intron chinmo + chr2L_14_1685001 chr2L_1685001 RAL-177 46 chr2L 1711346 1711383 chr2L 1711685 1711727 mdg3 11 337 5.0 9.0 7.0 1.4 381 chr2L 1711346 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711536 3` UTR frtz - chr2L 1711727 3` UTR frtz - chr2L_11_1710001 chr2L_1710001 RAL-177 47 chr2L 1785653 1785695 chr2L 1785764 1785806 14 110 2.0 4.0 3.0 3.5 153 chr2L 1785653 intergenic Gr22e + chr2L 1785730 intergenic Gr22e + chr2L 1785806 intergenic not near genes chr2L_14_1785001 chr2L_1785001 RAL-177 48 chr2L 1828530 1828571 chr2L 1828652 1828687 10 122 2.0 2.5 2.2 3.1 157 chr2L 1828530 intergenic not near genes chr2L 1828608 intergenic not near genes chr2L 1828687 intergenic not near genes chr2L_10_1825001 chr2L_1825001 RAL-177 49 chr2L 1883402 1883447 chr2L 1884004 1884047 7 599 2.0 4.0 3.0 1.8 645 chr2L 1883402 intron CG15358 - chr2L 1883724 intron CG15358 - chr2L 1884047 exon CG15358 - chr2L_7_1880001 chr2L_1880001 RAL-177 50 chr2L 1995678 1995703 chr2L 1995766 1995816 7 101 2.0 1.5 1.8 2.5 138 chr2L 1995678 intergenic not near genes chr2L 1995747 intergenic not near genes chr2L 1995816 intergenic not near genes chr2L_7_1995001 chr2L_1995001 RAL-177 51 chr2L 2007835 2007871 chr2L 2007963 2007999 16 128 3.5 3.5 3.5 3.6 164 chr2L 2007835 intergenic CR45712 + chr2L 2007917 intergenic CR45712 +,Nplp4 + chr2L 2007999 intergenic CR45712 +,Nplp4 + chr2L_16_2005001 chr2L_2005001 RAL-177 52 chr2L 2049203 2049240 chr2L 2049302 2049344 9 101 0.0 4.5 2.2 2.8 141 chr2L 2049203 intergenic not near genes chr2L 2049274 intergenic not near genes chr2L 2049344 intergenic not near genes chr2L_9_2045001 chr2L_2045001 RAL-177 53 chr2L 2100387 2100403 chr2L 2109533 2109551 roo 8 9158 3.5 3.5 3.5 1.8 9164 chr2L 2100387 intron dpr3 - chr2L 2104969 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_8_2100001 chr2L_2100001 RAL-177 54 chr2L 2112126 2112145 chr2L 2119773 2119821 opus 8 7668 0.5 4.0 2.2 2.5 7695 chr2L 2112126 intergenic not near genes chr2L 2115974 intergenic not near genes chr2L 2119821 intergenic not near genes chr2L_8_2115001 chr2L_2115001 RAL-177 55 chr2L 2160600 2160612 chr2L 2160710 2160722 12 109 6.5 9.0 7.8 1.4 122 chr2L 2160600 intron aop - chr2L 2160661 intron aop - chr2L 2160722 intron aop - chr2L_12_2160001 chr2L_2160001 RAL-177 56 chr2L 2167205 2167249 chr2L 2167303 2167357 21 104 6.0 5.0 5.5 3.2 152 chr2L 2167205 intron aop - chr2L 2167281 intron aop - chr2L 2167357 intron aop - chr2L_21_2165001 chr2L_2165001 RAL-177 57 chr2L 2262299 2262312 chr2L 2262385 2262409 12 95 7.0 3.5 5.2 1.9 110 chr2L 2262299 intergenic not near genes chr2L 2262354 intergenic not near genes chr2L 2262409 intergenic not near genes chr2L_12_2260001 chr2L_2260001 RAL-177 58 chr2L 2311052 2311075 chr2L 2311168 2311184 7 114 3.5 0.5 2.0 2.3 132 chr2L 2311052 intron CG9967 - chr2L 2311118 intron CG9967 - chr2L 2311184 intron CG9967 - chr2L_7_2310001 chr2L_2310001 RAL-177 59 chr2L 2317108 2317125 chr2L 2317299 2317316 4 191 17.5 22.5 20.0 0.2 208 chr2L 2317108 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317316 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-177 60 chr2L 2322034 2322042 chr2L 2322140 2322148 5 106 0.0 0.5 0.2 4.2 114 chr2L 2322034 intron,intron CG9967 -,eys + chr2L 2322091 intron,intron CG9967 -,eys + chr2L 2322148 intron,intron CG9967 -,eys + chr2L_5_2320001 chr2L_2320001 RAL-177 61 chr2L 2322043 2322076 chr2L 2322139 2322170 4 100 0.0 0.5 0.2 3.3 127 chr2L 2322043 intron,intron CG9967 -,eys + chr2L 2322106 intron,intron CG9967 -,eys + chr2L 2322170 intron,intron CG9967 -,eys + chr2L_4_2320001 chr2L_2320001 RAL-177 62 chr2L 2331604 2331618 chr2L 2331700 2331714 7 96 9.0 1.0 5.0 1.2 110 chr2L 2331604 intron,intron CG9967 -,eys + chr2L 2331659 intron,intron CG9967 -,eys + chr2L 2331714 intron,intron CG9967 -,eys + chr2L_7_2330001 chr2L_2330001 RAL-177 63 chr2L 2332546 2332567 chr2L 2332755 2332776 7 209 0.0 7.0 3.5 1.6 230 chr2L 2332546 intron,intron CG9967 -,eys + chr2L 2332661 intron,intron CG9967 -,eys + chr2L 2332776 intron,intron CG9967 -,eys + chr2L_7_2330001 chr2L_2330001 RAL-177 64 chr2L 2337318 2337372 chr2L 2337429 2337483 19 108 4.5 2.0 3.2 4.5 165 chr2L 2337318 intron,intron CG9967 -,eys + chr2L 2337400 intron,intron CG9967 -,eys + chr2L 2337483 intron,intron CG9967 -,eys + chr2L_19_2335001 chr2L_2335001 RAL-177 65 chr2L 2372350 2372400 chr2L 2372450 2372500 8 104 0.0 3.5 1.8 2.9 150 chr2L 2372350 intergenic CG3609 - chr2L 2372425 intergenic CG3609 - chr2L 2372500 3` UTR CG3609 - chr2L_8_2370001 chr2L_2370001 RAL-177 66 chr2L 2475659 2475702 chr2L 2475764 2475807 16 102 2.0 5.5 3.8 3.3 148 chr2L 2475659 intergenic not near genes chr2L 2475733 intergenic not near genes chr2L 2475807 intergenic not near genes chr2L_16_2475001 chr2L_2475001 RAL-177 67 chr2L 2503456 2503494 chr2L 2503629 2503668 4 165 3.0 2.0 2.5 1.1 212 chr2L 2503456 intergenic not near genes chr2L 2503562 intergenic not near genes chr2L 2503668 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RAL-177 68 chr2L 2504206 2504237 chr2L 2504304 2504335 14 97 1.5 6.5 4.0 2.8 129 chr2L 2504206 intergenic not near genes chr2L 2504270 intergenic not near genes chr2L 2504335 intergenic not near genes chr2L_14_2500001 chr2L_2500001 RAL-177 69 chr2L 2565534 2565558 chr2L 2571627 2571651 297 8 6090 3.0 3.5 3.2 1.9 6117 chr2L 2565534 exon Cyp309a2 - chr2L 2568592 intron Cyp309a2 - chr2L 2571651 exon Cyp309a2 - chr2L_8_2565001 chr2L_2565001 RAL-177 70 chr2L 2587816 2587848 chr2L 2587915 2587947 15 98 2.0 11.5 6.8 1.9 131 chr2L 2587816 intergenic not near genes chr2L 2587882 intergenic not near genes chr2L 2587947 intergenic not near genes chr2L_15_2585001 chr2L_2585001 RAL-177 71 chr2L 2607072 2607092 chr2L 2607262 2607282 6 190 7.5 2.0 4.8 1.0 210 chr2L 2607072 intergenic not near genes chr2L 2607177 intergenic not near genes chr2L 2607282 intergenic not near genes chr2L_6_2605001 chr2L_2605001 RAL-177 72 chr2L 2608071 2608109 chr2L 2608174 2608212 11 103 4.5 3.0 3.8 2.3 141 chr2L 2608071 intergenic not near genes chr2L 2608142 intergenic not near genes chr2L 2608212 intergenic not near genes chr2L_11_2605001 chr2L_2605001 RAL-177 73 chr2L 2620633 2620650 chr2L 2620758 2620775 7 124 3.0 9.0 6.0 1.0 142 chr2L 2620633 3` UTR CG43403 + chr2L 2620704 3` UTR CG43403 + chr2L 2620775 3` UTR CG43403 + chr2L_7_2620001 chr2L_2620001 RAL-177 74 chr2L 2661220 2661225 chr2L 2663037 2663046 I-element 5 1823 1.5 1.5 1.5 2.0 1826 chr2L 2661220 intergenic not near genes chr2L 2662133 intergenic not near genes chr2L 2663046 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-177 75 chr2L 2694228 2694283 chr2L 2694333 2694386 13 102 5.0 3.0 4.0 2.6 158 chr2L 2694228 intron CG31690 + chr2L 2694307 intron CG31690 + chr2L 2694386 intron CG31690 + chr2L_13_2690001 chr2L_2690001 RAL-177 76 chr2L 2725155 2725161 chr2L 2725255 2725261 5 100 5.5 5.5 5.5 0.8 106 chr2L 2725155 intergenic not near genes chr2L 2725208 intergenic CG31689 + chr2L 2725261 intergenic CG31689 + chr2L_5_2725001 chr2L_2725001 RAL-177 77 chr2L 2772595 2772625 chr2L 2779199 2779229 297 11 6604 7.0 9.5 8.2 1.2 6634 chr2L 2772595 3` UTR Syt1 - chr2L 2775912 intron Syt1 - chr2L 2779229 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-177 78 chr2L 2800592 2800613 chr2L 2800695 2800716 5 103 5.5 0.5 3.0 1.2 124 chr2L 2800592 intergenic not near genes chr2L 2800654 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_5_2800001 chr2L_2800001 RAL-177 79 chr2L 2826520 2826575 chr2L 2826632 2826647 16 102 0.0 4.5 2.2 5.0 127 chr2L 2826520 intron Duox - chr2L 2826584 intron Duox - chr2L 2826647 intron Duox - chr2L_16_2825001 chr2L_2825001 RAL-177 80 chr2L 2885353 2885397 chr2L 2885449 2885494 20 96 9.5 6.0 7.8 2.3 141 chr2L 2885353 intron NTPase - chr2L 2885424 intron NTPase - chr2L 2885494 intron NTPase - chr2L_20_2885001 chr2L_2885001 RAL-177 81 chr2L 2933312 2933317 chr2L 2935482 2935496 pogo 5 2184 7.0 4.0 5.5 0.8 2184 chr2L 2933312 intron lilli + chr2L 2934404 intron lilli + chr2L 2935496 intron lilli + chr2L_5_2930001 chr2L_2930001 RAL-177 82 chr2L 2933318 2933332 chr2L 2935476 2935529 pogo 4 2187 5.5 4.0 4.8 0.7 2211 chr2L 2933318 intron lilli + chr2L 2934424 intron lilli + chr2L 2935529 intron lilli + chr2L_4_2930001 chr2L_2930001 RAL-177 83 chr2L 2937404 2937450 chr2L 2937501 2937547 15 96 5.0 2.5 3.8 3.1 143 chr2L 2937404 intron lilli + chr2L 2937476 intron lilli + chr2L 2937547 intron lilli + chr2L_15_2935001 chr2L_2935001 RAL-177 84 chr2L 3073017 3073058 chr2L 3078240 3078281 copia 21 5223 5.0 7.5 6.2 2.9 5264 chr2L 3073017 intron toc - chr2L 3075649 intron toc - chr2L 3078281 intron toc - chr2L_21_3075001 chr2L_3075001 RAL-177 85 chr2L 3108870 3108897 chr2L 3108967 3108994 10 96 4.0 5.0 4.5 1.8 124 chr2L 3108870 intron toc - chr2L 3108932 intron toc - chr2L 3108994 intron toc - chr2L_10_3105001 chr2L_3105001 RAL-177 86 chr2L 3134276 3134293 chr2L 3134372 3134389 5 96 5.0 11.0 8.0 0.6 113 chr2L 3134276 intron toc - chr2L 3134332 intron toc - chr2L 3134389 intron toc - chr2L_5_3130001 chr2L_3130001 RAL-177 87 chr2L 3147256 3147304 chr2L 3147353 3147355 17 90 4.0 6.0 5.0 2.8 99 chr2L 3147256 3` UTR Mad - chr2L 3147306 3` UTR Mad - chr2L 3147355 3` UTR Mad - chr2L_17_3145001 chr2L_3145001 RAL-177 88 chr2L 3202718 3202772 chr2L 3210167 3210221 mdg1 17 7449 3.5 2.5 3.0 4.2 7503 chr2L 3202718 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210221 intergenic CR45336 + chr2L_17_3205001 chr2L_3205001 RAL-177 89 chr2L 3251477 3251522 chr2L 3259062 3259107 springer 14 7584 3.5 6.5 5.0 2.3 7630 chr2L 3251477 intergenic not near genes chr2L 3255292 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_14_3255001 chr2L_3255001 RAL-177 90 chr2L 3261497 3261511 chr2L 3261609 3261622 4 112 8.0 20.0 14.0 0.3 125 chr2L 3261497 intergenic CR45338 -,CR45337 - chr2L 3261560 intergenic CR45338 -,CR45337 - chr2L 3261622 intergenic CR45338 -,CR45337 - chr2L_4_3260001 chr2L_3260001 RAL-177 91 chr2L 3291217 3291261 chr2L 3291317 3291361 11 99 8.5 2.0 5.2 1.8 144 chr2L 3291217 intergenic CG9664 - chr2L 3291289 3` UTR CG9664 - chr2L 3291361 3` UTR CG9664 - chr2L_11_3290001 chr2L_3290001 RAL-177 92 chr2L 3313052 3313094 chr2L 3313151 3313204 17 108 2.5 3.0 2.8 4.5 152 chr2L 3313052 intron CG3277 + chr2L 3313128 intron CG3277 + chr2L 3313204 intron CG3277 + chr2L_17_3310001 chr2L_3310001 RAL-177 93 chr2L 3314677 3314724 chr2L 3314774 3314821 16 95 7.0 2.0 4.5 2.9 144 chr2L 3314677 intron CG3277 + chr2L 3314749 intron CG3277 + chr2L 3314821 intron CG3277 + chr2L_16_3310001 chr2L_3310001 RAL-177 94 chr2L 3379738 3379771 chr2L 3379867 3379879 9 125 0.0 7.5 3.8 1.9 141 chr2L 3379738 intergenic not near genes chr2L 3379808 intergenic not near genes chr2L 3379879 intergenic not near genes chr2L_9_3375001 chr2L_3375001 RAL-177 95 chr2L 3388580 3388629 chr2L 3388841 3388890 pogo 10 260 6.0 6.0 6.0 1.4 310 chr2L 3388580 intergenic CG42460 - chr2L 3388735 intergenic CG42460 - chr2L 3388890 intergenic CG42460 -,CR44791 + chr2L_10_3385001 chr2L_3385001 RAL-177 96 chr2L 3471185 3471228 chr2L 3471275 3471324 12 91 3.0 4.0 3.5 2.7 139 chr2L 3471185 exon CG31776 + chr2L 3471254 exon CG31776 + chr2L 3471324 exon CG31776 + chr2L_12_3470001 chr2L_3470001 RAL-177 97 chr2L 3498707 3498748 chr2L 3498795 3498845 8 94 4.5 8.5 6.5 1.1 138 chr2L 3498707 intron tim - chr2L 3498776 intron tim - chr2L 3498845 intron tim - chr2L_8_3495001 chr2L_3495001 RAL-177 98 chr2L 3505426 3505478 chr2L 3505543 3505595 11 116 4.0 3.5 3.8 2.3 169 chr2L 3505426 intron tim - chr2L 3505510 intron tim - chr2L 3505595 intron tim - chr2L_11_3505001 chr2L_3505001 RAL-177 99 chr2L 3508354 3508375 chr2L 3508452 3508473 7 96 0.0 7.5 3.8 1.5 119 chr2L 3508354 intergenic tim -,CR45299 + chr2L 3508414 intergenic CR45299 +,tim - chr2L 3508473 intergenic CR45299 +,tim - chr2L_7_3505001 chr2L_3505001 RAL-177 100 chr2L 3519912 3519959 chr2L 3520020 3520067 18 107 4.5 6.5 5.5 2.8 155 chr2L 3519912 exon CG8851 + chr2L 3519990 intron CG8851 + chr2L 3520067 intron CG8851 + chr2L_18_3515001 chr2L_3515001 RAL-177 101 chr2L 3542209 3542248 chr2L 3542712 3542751 15 502 3.0 2.0 2.5 4.3 542 chr2L 3542209 intron drm + chr2L 3542480 intron drm + chr2L 3542751 intron drm + chr2L_15_3540001 chr2L_3540001 RAL-177 102 chr2L 3557077 3557131 chr2L 3557450 3557494 18 370 3.5 2.5 3.0 4.5 417 chr2L 3557077 intergenic not near genes chr2L 3557286 intergenic not near genes chr2L 3557494 intergenic not near genes chr2L_18_3555001 chr2L_3555001 RAL-177 103 chr2L 3632253 3632261 chr2L 3632350 3632358 5 96 0.0 2.0 1.0 2.5 105 chr2L 3632253 intron for - chr2L 3632306 intron for - chr2L 3632358 intron for - chr2L_5_3630001 chr2L_3630001 RAL-177 104 chr2L 3668050 3668065 chr2L 3668146 3668161 7 95 0.0 8.0 4.0 1.4 111 chr2L 3668050 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668106 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668161 intron,exon CG34340 +,Sfp24Ba - chr2L_7_3665001 chr2L_3665001 RAL-177 105 chr2L 3686033 3686055 chr2L 3686120 3686163 7 100 2.5 6.0 4.2 1.3 130 chr2L 3686033 intron CG34340 + chr2L 3686098 intron CG34340 + chr2L 3686163 intron CG34340 + chr2L_7_3685001 chr2L_3685001 RAL-177 106 chr2L 3831818 3831862 chr2L 3831919 3831963 22 101 4.5 6.0 5.2 3.5 145 chr2L 3831818 intergenic not near genes chr2L 3831890 intergenic not near genes chr2L 3831963 intergenic not near genes chr2L_22_3830001 chr2L_3830001 RAL-177 107 chr2L 3862413 3862515 chr2L 3862517 3862622 8 105 0.0 0.0 0.0 8.0 209 chr2L 3862413 intergenic CG3964 +,CR44078 - chr2L 3862518 intergenic CG3964 +,CR44078 - chr2L 3862622 intergenic CG3964 + chr2L_8_3860001 chr2L_3860001 RAL-177 108 chr2L 3898248 3898307 chr2L 3898353 3898404 5 102 0.0 3.5 1.8 1.8 156 chr2L 3898248 intron capu - chr2L 3898326 intron capu - chr2L 3898404 intron capu - chr2L_5_3895001 chr2L_3895001 RAL-177 109 chr2L 3936607 3936655 chr2L 3936704 3936755 6 96 2.0 0.0 1.0 3.0 148 chr2L 3936607 intron fred - chr2L 3936681 intron fred - chr2L 3936755 intron fred - chr2L_6_3935001 chr2L_3935001 RAL-177 110 chr2L 3943784 3943822 chr2L 3943895 3943933 11 111 5.5 5.5 5.5 1.7 149 chr2L 3943784 intron fred - chr2L 3943858 intron fred - chr2L 3943933 intron fred - chr2L_11_3940001 chr2L_3940001 RAL-177 111 chr2L 3959153 3959206 chr2L 3959249 3959302 11 96 3.0 1.5 2.2 3.4 149 chr2L 3959153 intron fred - chr2L 3959228 intron fred - chr2L 3959302 intron fred - chr2L_11_3955001 chr2L_3955001 RAL-177 112 chr2L 4060161 4060192 chr2L 4060257 4060288 5 94 0.5 1.5 1.0 2.5 127 chr2L 4060161 intron ed + chr2L 4060224 intron ed + chr2L 4060288 intron ed + chr2L_5_4060001 chr2L_4060001 RAL-177 113 chr2L 4147952 4147959 chr2L 4148048 4148055 4 96 6.0 6.0 6.0 0.6 103 chr2L 4147952 intergenic not near genes chr2L 4148004 intergenic not near genes chr2L 4148055 intergenic not near genes chr2L_4_4145001 chr2L_4145001 RAL-177 114 chr2L 4150619 4150656 chr2L 4150708 4150746 6 94 1.0 2.5 1.8 2.1 127 chr2L 4150619 exon CG2955 + chr2L 4150682 exon CG2955 + chr2L 4150746 exon CG2955 + chr2L_6_4150001 chr2L_4150001 RAL-177 115 chr2L 4160482 4160530 chr2L 4160913 4160961 13 427 3.5 1.5 2.5 3.7 479 chr2L 4160482 intergenic not near genes chr2L 4160722 intergenic not near genes chr2L 4160961 intergenic not near genes chr2L_13_4160001 chr2L_4160001 RAL-177 116 chr2L 4192971 4192981 chr2L 4193072 4193082 6 101 3.0 4.0 3.5 1.3 111 chr2L 4192971 intron CG3714 - chr2L 4193026 intron CG3714 - chr2L 4193082 intron CG3714 - chr2L_6_4190001 chr2L_4190001 RAL-177 117 chr2L 4192986 4193016 chr2L 4193071 4193077 10 92 1.0 3.5 2.2 3.1 91 chr2L 4192986 intron CG3714 - chr2L 4193032 intron CG3714 - chr2L 4193077 intron CG3714 - chr2L_10_4190001 chr2L_4190001 RAL-177 118 chr2L 4218321 4218351 chr2L 4218419 4218444 7 97 2.0 2.5 2.2 2.2 123 chr2L 4218321 intron ft - chr2L 4218382 intron ft - chr2L 4218444 intron ft - chr2L_7_4215001 chr2L_4215001 RAL-177 119 chr2L 4232848 4232891 chr2L 4232952 4232983 10 104 5.5 2.5 4.0 2.0 135 chr2L 4232848 intergenic not near genes chr2L 4232916 intergenic not near genes chr2L 4232983 intergenic not near genes chr2L_10_4230001 chr2L_4230001 RAL-177 120 chr2L 4233455 4233501 chr2L 4233563 4233609 17 107 3.5 7.5 5.5 2.6 154 chr2L 4233455 intergenic not near genes chr2L 4233532 intergenic not near genes chr2L 4233609 intergenic not near genes chr2L_17_4230001 chr2L_4230001 RAL-177 121 chr2L 4265476 4265523 chr2L 4265581 4265629 10 105 2.0 3.0 2.5 2.9 153 chr2L 4265476 intergenic not near genes chr2L 4265552 intergenic not near genes chr2L 4265629 intergenic not near genes chr2L_10_4265001 chr2L_4265001 RAL-177 122 chr2L 4285698 4285737 chr2L 4285797 4285837 12 98 3.0 4.5 3.8 2.5 139 chr2L 4285698 intron tutl + chr2L 4285768 intron tutl + chr2L 4285837 intron tutl + chr2L_12_4285001 chr2L_4285001 RAL-177 123 chr2L 4300241 4300254 chr2L 4300336 4300350 5 96 12.0 1.0 6.5 0.7 109 chr2L 4300241 intron tutl + chr2L 4300296 intron tutl + chr2L 4300350 intron tutl + chr2L_5_4300001 chr2L_4300001 RAL-177 124 chr2L 4351454 4351490 chr2L 4351550 4351586 20 94 9.0 6.5 7.8 2.3 132 chr2L 4351454 intergenic CR44700 + chr2L 4351520 intergenic CR44700 + chr2L 4351586 intergenic CR44700 + chr2L_20_4350001 chr2L_4350001 RAL-177 125 chr2L 4601685 4601730 chr2L 4609146 4609191 mdg1 9 7460 6.0 3.0 4.5 1.6 7506 chr2L 4601685 intron dp - chr2L 4605438 intron dp - chr2L 4609191 intron dp - chr2L_9_4605001 chr2L_4605001 RAL-177 126 chr2L 4626272 4626311 chr2L 4626381 4626420 9 106 4.0 4.5 4.2 1.7 148 chr2L 4626272 intergenic not near genes chr2L 4626346 intergenic not near genes chr2L 4626420 intergenic not near genes chr2L_9_4625001 chr2L_4625001 RAL-177 127 chr2L 4661825 4661854 chr2L 4669425 4669454 opus 6 7598 7.5 11.5 9.5 0.6 7629 chr2L 4661825 intergenic not near genes chr2L 4665640 intergenic not near genes chr2L 4669454 intergenic not near genes chr2L_6_4665001 chr2L_4665001 RAL-177 128 chr2L 4748674 4748720 chr2L 4748773 4748819 12 98 5.5 4.0 4.8 2.1 145 chr2L 4748674 intron CG15630 - chr2L 4748746 intron CG15630 - chr2L 4748819 intron CG15630 - chr2L_12_4745001 chr2L_4745001 RAL-177 129 chr2L 4793295 4793322 chr2L 4793610 4793637 6 313 1.5 3.5 2.5 1.7 342 chr2L 4793295 intron CG15630 - chr2L 4793466 intron CG15630 - chr2L 4793637 exon CG15630 - chr2L_6_4790001 chr2L_4790001 RAL-177 130 chr2L 4858450 4858465 chr2L 4858558 4858573 7 108 3.5 1.0 2.2 2.2 123 chr2L 4858450 intron pog + chr2L 4858512 intron pog + chr2L 4858573 intron pog + chr2L_7_4855001 chr2L_4855001 RAL-177 131 chr2L 4858469 4858485 chr2L 4858552 4858593 13 106 1.5 1.0 1.2 5.9 124 chr2L 4858469 intron pog + chr2L 4858531 intron pog + chr2L 4858593 intron pog + chr2L_13_4855001 chr2L_4855001 RAL-177 132 chr2L 4918145 4918162 chr2L 4923238 4923255 jockey 5 5093 14.5 0.5 7.5 0.6 5110 chr2L 4918145 intron hoe1 - chr2L 4920700 intron hoe1 - chr2L 4923255 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-177 133 chr2L 4923249 4923254 chr2L 4923330 4923363 4 102 0.0 1.0 0.5 2.7 114 chr2L 4923249 intron hoe1 - chr2L 4923306 intron hoe1 - chr2L 4923363 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-177 134 chr2L 4953496 4953544 chr2L 4953757 4953794 pogo 22 258 2.5 5.0 3.8 4.6 298 chr2L 4953496 intergenic Jon25Bii - chr2L 4953645 intergenic not near genes chr2L 4953794 intergenic Jon25Bi - chr2L_22_4950001 chr2L_4950001 RAL-177 135 chr2L 5027955 5027986 chr2L 5028059 5028090 11 104 1.0 4.0 2.5 3.1 135 chr2L 5027955 intron vkg - chr2L 5028022 intron vkg - chr2L 5028090 intron vkg - chr2L_11_5025001 chr2L_5025001 RAL-177 136 chr2L 5041847 5041878 chr2L 5041956 5041987 21 109 7.5 7.0 7.2 2.6 140 chr2L 5041847 intron CG31650 - chr2L 5041917 intron CG31650 - chr2L 5041987 intron CG31650 - chr2L_21_5040001 chr2L_5040001 RAL-177 137 chr2L 5041882 5041893 chr2L 5041991 5042002 5 109 6.0 14.0 10.0 0.5 120 chr2L 5041882 intron CG31650 - chr2L 5041942 intron CG31650 - chr2L 5042002 intron CG31650 - chr2L_5_5040001 chr2L_5040001 RAL-177 138 chr2L 5092391 5092437 chr2L 5092498 5092544 19 107 4.5 5.5 5.0 3.2 153 chr2L 5092391 intron pgant5 - chr2L 5092468 intron pgant5 - chr2L 5092544 intron pgant5 - chr2L_19_5090001 chr2L_5090001 RAL-177 139 chr2L 5106906 5106926 chr2L 5107013 5107033 4 104 4.0 3.5 3.8 0.8 127 chr2L 5106906 intron Msp300 + chr2L 5106970 intron Msp300 + chr2L 5107033 intron Msp300 + chr2L_4_5105001 chr2L_5105001 RAL-177 140 chr2L 5117278 5117324 chr2L 5117380 5117405 13 99 1.5 5.5 3.5 2.9 127 chr2L 5117278 intron Msp300 + chr2L 5117342 intron Msp300 + chr2L 5117405 intron Msp300 + chr2L_13_5115001 chr2L_5115001 RAL-177 141 chr2L 5262524 5262545 chr2L 5262605 5262625 6 85 3.0 6.5 4.8 1.0 101 chr2L 5262524 intron tkv - chr2L 5262574 intron tkv - chr2L 5262625 intron tkv - chr2L_6_5260001 chr2L_5260001 RAL-177 142 chr2L 5285600 5285616 chr2L 5285723 5285751 4 127 5.5 2.5 4.0 0.8 151 chr2L 5285600 intergenic not near genes chr2L 5285676 intergenic not near genes chr2L 5285751 intergenic not near genes chr2L_4_5285001 chr2L_5285001 RAL-177 143 chr2L 5342751 5342792 chr2L 5345151 5345191 Doc 10 2400 2.5 4.5 3.5 2.2 2440 chr2L 5342751 intergenic not near genes chr2L 5343971 intergenic not near genes chr2L 5345191 intergenic not near genes chr2L_10_5340001 chr2L_5340001 RAL-177 144 chr2L 5403119 5403166 chr2L 5403232 5403279 5 113 6.0 0.0 3.0 1.2 160 chr2L 5403119 intergenic not near genes chr2L 5403199 intergenic not near genes chr2L 5403279 intergenic not near genes chr2L_5_5400001 chr2L_5400001 RAL-177 145 chr2L 5458363 5458380 chr2L 5458457 5458484 6 99 4.0 3.0 3.5 1.3 121 chr2L 5458363 intergenic not near genes chr2L 5458424 intergenic not near genes chr2L 5458484 intergenic not near genes chr2L_6_5455001 chr2L_5455001 RAL-177 146 chr2L 5459801 5459851 chr2L 5459907 5459957 10 103 1.5 5.0 3.2 2.4 156 chr2L 5459801 intergenic not near genes chr2L 5459879 intergenic not near genes chr2L 5459957 intergenic not near genes chr2L_10_5455001 chr2L_5455001 RAL-177 147 chr2L 5475137 5475164 chr2L 5475262 5475289 6 125 1.5 3.0 2.2 1.9 152 chr2L 5475137 intergenic not near genes chr2L 5475213 intergenic not near genes chr2L 5475289 intergenic not near genes chr2L_6_5475001 chr2L_5475001 RAL-177 148 chr2L 5508527 5508562 chr2L 5508623 5508658 18 96 4.0 8.5 6.2 2.5 131 chr2L 5508527 intergenic not near genes chr2L 5508592 intergenic not near genes chr2L 5508658 intergenic not near genes chr2L_18_5505001 chr2L_5505001 RAL-177 149 chr2L 5563665 5563694 chr2L 5563769 5563798 9 104 2.0 4.0 3.0 2.2 133 chr2L 5563665 intergenic GluRIIB + chr2L 5563732 intergenic GluRIIB + chr2L 5563798 intergenic GluRIIB + chr2L_9_5560001 chr2L_5560001 RAL-177 150 chr2L 5640041 5640087 chr2L 5640248 5640296 19 209 29.0 26.5 27.8 0.7 255 chr2L 5640041 intron CG31646 - chr2L 5640168 intron CG31646 - chr2L 5640296 exon CG31646 - chr2L_19_5640001 chr2L_5640001 RAL-177 151 chr2L 5647523 5647545 chr2L 5647649 5647671 6 126 4.5 8.5 6.5 0.8 148 chr2L 5647523 intron CG31646 - chr2L 5647597 intron CG31646 - chr2L 5647671 intron CG31646 - chr2L_6_5645001 chr2L_5645001 RAL-177 152 chr2L 5720261 5720293 chr2L 5720350 5720385 12 99 6.0 2.5 4.2 2.3 124 chr2L 5720261 intron CG11149 - chr2L 5720323 intron CG11149 - chr2L 5720385 intron CG11149 - chr2L_12_5720001 chr2L_5720001 RAL-177 153 chr2L 5744744 5744799 chr2L 5744858 5744902 15 109 2.0 1.0 1.5 6.0 158 chr2L 5744744 intron CG11030 + chr2L 5744823 intron CG11030 + chr2L 5744902 intron CG11030 + chr2L_15_5740001 chr2L_5740001 RAL-177 154 chr2L 5819659 5819702 chr2L 5819763 5819806 10 104 4.0 4.0 4.0 2.0 147 chr2L 5819659 intergenic not near genes chr2L 5819732 intergenic not near genes chr2L 5819806 intergenic not near genes chr2L_10_5815001 chr2L_5815001 RAL-177 155 chr2L 5827694 5827736 chr2L 5836722 5836764 roo 16 9025 3.0 4.0 3.5 3.6 9070 chr2L 5827694 intron TrissinR + chr2L 5832229 intron TrissinR + chr2L 5836764 intron TrissinR + chr2L_16_5830001 chr2L_5830001 RAL-177 156 chr2L 5887583 5887633 chr2L 5887684 5887724 19 100 4.5 5.5 5.0 3.2 141 chr2L 5887583 3` UTR CR44577 - chr2L 5887654 3` UTR CR44577 - chr2L 5887724 3` UTR CR44577 - chr2L_19_5885001 chr2L_5885001 RAL-177 157 chr2L 5904441 5904475 chr2L 5904541 5904575 12 99 2.0 1.0 1.5 4.8 134 chr2L 5904441 exon CG9021 - chr2L 5904508 intron CG9021 - chr2L 5904575 intron CG9021 - chr2L_12_5900001 chr2L_5900001 RAL-177 158 chr2L 5931299 5931514 chr2L 5931431 5931643 21 130 4.0 4.5 4.2 4.0 344 chr2L 5931299 intron dsf + chr2L 5931471 intron dsf + chr2L 5931643 intron dsf + chr2L_21_5930001 chr2L_5930001 RAL-177 159 chr2L 5942007 5942054 chr2L 5942119 5942166 7 107 5.5 5.0 5.2 1.1 159 chr2L 5942007 5` UTR CR45289 + chr2L 5942086 5` UTR CR45289 + chr2L 5942166 5` UTR CR45289 + chr2L_7_5940001 chr2L_5940001 RAL-177 160 chr2L 5982129 5982165 chr2L 5982218 5982238 10 90 4.5 8.5 6.5 1.3 109 chr2L 5982129 intron eIF-4a + chr2L 5982184 intron eIF-4a + chr2L 5982238 intron eIF-4a + chr2L_10_5980001 chr2L_5980001 RAL-177 161 chr2L 5993311 5993359 chr2L 5993422 5993469 20 110 2.5 6.5 4.5 3.6 158 chr2L 5993311 exon lid - chr2L 5993390 intron lid - chr2L 5993469 intron lid - chr2L_20_5990001 chr2L_5990001 RAL-177 162 chr2L 6001725 6001765 chr2L 6001822 6001862 12 95 3.5 5.0 4.2 2.3 137 chr2L 6001725 exon Tsp26A + chr2L 6001794 3` UTR Tsp26A + chr2L 6001862 3` UTR Tsp26A + chr2L_12_6000001 chr2L_6000001 RAL-177 163 chr2L 6116695 6116715 chr2L 6116796 6116824 7 103 4.5 1.5 3.0 1.8 129 chr2L 6116695 intron stai + chr2L 6116760 intron stai + chr2L 6116824 intron stai + chr2L_7_6115001 chr2L_6115001 RAL-177 164 chr2L 6136537 6136580 chr2L 6136654 6136697 8 117 1.0 6.0 3.5 1.8 160 chr2L 6136537 intergenic not near genes chr2L 6136617 intergenic not near genes chr2L 6136697 intergenic not near genes chr2L_8_6135001 chr2L_6135001 RAL-177 165 chr2L 6157269 6157298 chr2L 6157378 6157407 13 109 2.0 11.0 6.5 1.7 138 chr2L 6157269 intergenic not near genes chr2L 6157338 intergenic not near genes chr2L 6157407 intergenic not near genes chr2L_13_6155001 chr2L_6155001 RAL-177 166 chr2L 6185446 6185469 chr2L 6185546 6185570 6 101 4.0 6.0 5.0 1.0 124 chr2L 6185446 intron CG34380 + chr2L 6185508 intron CG34380 + chr2L 6185570 intron CG34380 + chr2L_6_6185001 chr2L_6185001 RAL-177 167 chr2L 6282469 6282514 chr2L 6282570 6282609 16 89 1.5 2.0 1.8 5.7 140 chr2L 6282469 intron Ddr + chr2L 6282539 intron Ddr + chr2L 6282609 intron Ddr + chr2L_16_6280001 chr2L_6280001 RAL-177 168 chr2L 6283923 6283946 chr2L 6284053 6284076 5 130 7.0 4.5 5.8 0.7 153 chr2L 6283923 intron Ddr + chr2L 6284000 intron Ddr + chr2L 6284076 intron Ddr + chr2L_5_6280001 chr2L_6280001 RAL-177 169 chr2L 6312357 6312362 chr2L 6312454 6312459 4 97 0.0 10.5 5.2 0.6 102 chr2L 6312357 intron Ddr + chr2L 6312408 intron Ddr + chr2L 6312459 intron Ddr + chr2L_4_6310001 chr2L_6310001 RAL-177 170 chr2L 6343666 6343693 chr2L 6343960 6343987 15 296 36.0 36.0 36.0 0.4 321 chr2L 6343666 intron Cpr + chr2L 6343826 intron Cpr + chr2L 6343987 intron Cpr + chr2L_15_6340001 chr2L_6340001 RAL-177 171 chr2L 6349057 6349074 chr2L 6349155 6349172 7 97 6.0 3.5 4.8 1.2 115 chr2L 6349057 intergenic CG9498 - chr2L 6349114 intergenic CG9498 - chr2L 6349172 intergenic CG9498 - chr2L_7_6345001 chr2L_6345001 RAL-177 172 chr2L 6363129 6363182 chr2L 6366071 6366124 Burdock 19 2938 6.0 4.0 5.0 3.2 2995 chr2L 6363129 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366124 intergenic not near genes chr2L_19_6360001 chr2L_6360001 RAL-177 173 chr2L 6426837 6426846 chr2L 6445117 6445126 roo 6 18280 17.0 4.5 10.8 0.5 18289 chr2L 6426837 3` UTR CG9527 - chr2L 6435982 intron CG9527 - chr2L 6445126 exon CG9527 - chr2L_6_6435001 chr2L_6435001 RAL-177 174 chr2L 6426851 6426884 chr2L 6445114 6445164 roo 13 18278 10.5 4.5 7.5 1.5 18313 chr2L 6426851 3` UTR CG9527 - chr2L 6436008 intron CG9527 - chr2L 6445164 exon CG9527 - chr2L_13_6435001 chr2L_6435001 RAL-177 175 chr2L 6463541 6463584 chr2L 6463650 6463674 8 102 3.0 4.5 3.8 1.7 133 chr2L 6463541 exon CG16947 - chr2L 6463608 exon CG16947 - chr2L 6463674 exon CG16947 - chr2L_8_6460001 chr2L_6460001 RAL-177 176 chr2L 6483618 6483804 chr2L 6483742 6483889 4 109 3.0 2.5 2.8 1.1 271 chr2L 6483618 exon DLP + chr2L 6483754 exon DLP + chr2L 6483889 exon DLP + chr2L_4_6480001 chr2L_6480001 RAL-177 177 chr2L 6504561 6504617 chr2L 6504662 6504718 13 92 0.5 3.0 1.8 4.6 157 chr2L 6504561 intron CG31637 + chr2L 6504640 intron CG31637 + chr2L 6504718 intron CG31637 + chr2L_13_6500001 chr2L_6500001 RAL-177 178 chr2L 6536807 6536823 chr2L 6536936 6536965 6 138 3.5 5.5 4.5 1.1 158 chr2L 6536807 intron eya - chr2L 6536886 intron eya - chr2L 6536965 intron eya - chr2L_6_6535001 chr2L_6535001 RAL-177 179 chr2L 6544358 6544392 chr2L 6544470 6544504 12 112 4.0 6.0 5.0 2.0 146 chr2L 6544358 intron eya - chr2L 6544431 intron eya - chr2L 6544504 intron eya - chr2L_12_6540001 chr2L_6540001 RAL-177 180 chr2L 6564824 6564879 chr2L 6564937 6564991 17 113 4.5 4.5 4.5 3.1 167 chr2L 6564824 3` UTR CG13766 - chr2L 6564908 3` UTR CG13766 - chr2L 6564991 3` UTR CG13766 - chr2L_17_6560001 chr2L_6560001 RAL-177 181 chr2L 6626869 6626918 chr2L 6626974 6626987 14 100 3.5 5.5 4.5 2.5 118 chr2L 6626869 intron Oatp26F - chr2L 6626928 intron Oatp26F - chr2L 6626987 intron Oatp26F - chr2L_14_6625001 chr2L_6625001 RAL-177 182 chr2L 6640886 6640940 chr2L 6641001 6641055 17 110 5.0 5.5 5.2 2.7 169 chr2L 6640886 exon CG31635 - chr2L 6640970 intron CG31635 - chr2L 6641055 intron CG31635 - chr2L_17_6640001 chr2L_6640001 RAL-177 183 chr2L 6740747 6740752 chr2L 6740843 6740859 5 105 0.0 14.0 7.0 0.6 112 chr2L 6740747 intergenic not near genes chr2L 6740803 intergenic not near genes chr2L 6740859 intergenic not near genes chr2L_5_6740001 chr2L_6740001 RAL-177 184 chr2L 6772588 6772597 chr2L 6772667 6772700 5 98 4.0 6.0 5.0 0.8 112 chr2L 6772588 5` UTR CG11321 - chr2L 6772644 5` UTR CG11321 - chr2L 6772700 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-177 185 chr2L 6799516 6799572 chr2L 6799624 6799680 13 104 3.0 4.5 3.8 2.7 164 chr2L 6799516 5` UTR CR43610 + chr2L 6799598 5` UTR CR43610 + chr2L 6799680 intergenic CR43610 +,CG17376 - chr2L_13_6795001 chr2L_6795001 RAL-177 186 chr2L 6823159 6823198 chr2L 6823264 6823303 12 105 4.0 5.0 4.5 2.2 144 chr2L 6823159 intron sens-2 + chr2L 6823231 intron sens-2 + chr2L 6823303 intron sens-2 + chr2L_12_6820001 chr2L_6820001 RAL-177 187 chr2L 6850362 6850412 chr2L 6850462 6850514 13 103 4.5 3.0 3.8 2.7 152 chr2L 6850362 intergenic not near genes chr2L 6850438 intergenic not near genes chr2L 6850514 intergenic not near genes chr2L_13_6850001 chr2L_6850001 RAL-177 188 chr2L 6876774 6876810 chr2L 6882964 6883001 diver 6 6199 5.0 3.5 4.2 1.2 6227 chr2L 6876774 intron Nlg2 + chr2L 6879888 intron Nlg2 + chr2L 6883001 intron Nlg2 + chr2L_6_6875001 chr2L_6875001 RAL-177 189 chr2L 6971972 6971979 chr2L 6972129 6972135 5 157 4.0 0.0 2.0 1.7 163 chr2L 6971972 intergenic snRNP-U1-70K - chr2L 6972054 intergenic snRNP-U1-70K - chr2L 6972135 intergenic snRNP-U1-70K - chr2L_5_6970001 chr2L_6970001 RAL-177 190 chr2L 6991411 6991436 chr2L 6998550 6998575 HMS-Beagle 6 7136 11.5 3.5 7.5 0.7 7164 chr2L 6991411 intron uif - chr2L 6994993 intron uif - chr2L 6998575 intron uif - chr2L_6_6990001 chr2L_6990001 RAL-177 191 chr2L 7014640 7014671 chr2L 7014814 7014845 4 174 7.5 1.0 4.2 0.8 205 chr2L 7014640 exon,3` UTR CG43322 +,ade3 - chr2L 7014742 3` UTR ade3 - chr2L 7014845 3` UTR ade3 - chr2L_4_7010001 chr2L_7010001 RAL-177 192 chr2L 7030058 7030110 chr2L 7030159 7030211 15 96 4.5 5.5 5.0 2.5 153 chr2L 7030058 intergenic Rab30 - chr2L 7030134 intergenic Rab30 - chr2L 7030211 intergenic Rab30 - chr2L_15_7030001 chr2L_7030001 RAL-177 193 chr2L 7041253 7041287 chr2L 7041362 7041396 20 109 0.5 4.5 2.5 5.7 143 chr2L 7041253 intron milt + chr2L 7041324 intron milt + chr2L 7041396 intron milt + chr2L_20_7040001 chr2L_7040001 RAL-177 194 chr2L 7043513 7043530 chr2L 7043667 7043677 8 153 0.0 2.5 1.2 3.6 164 chr2L 7043513 intron milt + chr2L 7043595 intron milt + chr2L 7043677 intron milt + chr2L_8_7040001 chr2L_7040001 RAL-177 195 chr2L 7051145 7051164 chr2L 7051228 7051260 8 94 1.0 1.5 1.2 3.6 115 chr2L 7051145 intron milt + chr2L 7051202 intron milt + chr2L 7051260 intron milt + chr2L_8_7050001 chr2L_7050001 RAL-177 196 chr2L 7089982 7090021 chr2L 7090079 7090088 4 87 3.0 2.5 2.8 1.1 106 chr2L 7089982 intergenic not near genes chr2L 7090035 intergenic not near genes chr2L 7090088 intergenic not near genes chr2L_4_7090001 chr2L_7090001 RAL-177 197 chr2L 7100960 7101011 chr2L 7101206 7101242 11 243 2.5 0.0 1.2 5.0 282 chr2L 7100960 intron Pvf3 - chr2L 7101101 intron Pvf3 - chr2L 7101242 intron Pvf3 - chr2L_11_7100001 chr2L_7100001 RAL-177 198 chr2L 7111745 7111754 chr2L 7111845 7111852 6 103 4.0 0.0 2.0 2.0 107 chr2L 7111745 intron Pvf3 - chr2L 7111798 intron Pvf3 - chr2L 7111852 intron Pvf3 - chr2L_6_7110001 chr2L_7110001 RAL-177 199 chr2L 7126841 7126875 chr2L 7126940 7126974 18 99 4.5 0.0 2.2 5.6 133 chr2L 7126841 intron Pvf3 - chr2L 7126908 intron Pvf3 - chr2L 7126974 intron Pvf3 - chr2L_18_7125001 chr2L_7125001 RAL-177 200 chr2L 7193680 7193683 chr2L 7193784 7193787 4 104 0.0 9.5 4.8 0.7 107 chr2L 7193680 intron CG4497 - chr2L 7193734 intron CG4497 - chr2L 7193787 intron CG4497 - chr2L_4_7190001 chr2L_7190001 RAL-177 201 chr2L 7193689 7193696 chr2L 7193777 7193800 6 101 0.0 8.5 4.2 1.2 111 chr2L 7193689 intron CG4497 - chr2L 7193744 intron CG4497 - chr2L 7193800 intron CG4497 - chr2L_6_7190001 chr2L_7190001 RAL-177 202 chr2L 7215258 7215293 chr2L 7215360 7215395 4 102 2.5 1.0 1.8 1.4 137 chr2L 7215258 intron CG13784 - chr2L 7215326 intron CG13784 - chr2L 7215395 intron CG13784 - chr2L_4_7215001 chr2L_7215001 RAL-177 203 chr2L 7218380 7218431 chr2L 7218478 7218518 14 97 5.0 4.0 4.5 2.5 138 chr2L 7218380 intron CG13784 - chr2L 7218449 intron CG13784 - chr2L 7218518 intron CG13784 - chr2L_14_7215001 chr2L_7215001 RAL-177 204 chr2L 7244704 7244753 chr2L 7244849 7244898 11 144 4.5 3.0 3.8 2.3 194 chr2L 7244704 intron Ndae1 - chr2L 7244801 intron Ndae1 - chr2L 7244898 intron Ndae1 - chr2L_11_7240001 chr2L_7240001 RAL-177 205 chr2L 7284593 7284632 chr2L 7284700 7284739 20 107 3.0 2.0 2.5 5.7 146 chr2L 7284593 intergenic not near genes chr2L 7284666 intergenic not near genes chr2L 7284739 intergenic not near genes chr2L_20_7280001 chr2L_7280001 RAL-177 206 chr2L 7295987 7296019 chr2L 7296134 7296178 6 154 4.5 4.5 4.5 1.1 191 chr2L 7295987 intergenic not near genes chr2L 7296082 intergenic not near genes chr2L 7296178 intergenic not near genes chr2L_6_7295001 chr2L_7295001 RAL-177 207 chr2L 7301281 7301331 chr2L 7301384 7301434 16 101 3.5 3.5 3.5 3.6 153 chr2L 7301281 intergenic not near genes chr2L 7301358 intergenic not near genes chr2L 7301434 intergenic not near genes chr2L_16_7300001 chr2L_7300001 RAL-177 208 chr2L 7325915 7325945 chr2L 7326001 7326041 8 91 1.0 2.5 1.8 2.9 126 chr2L 7325915 intergenic not near genes chr2L 7325978 intergenic not near genes chr2L 7326041 intergenic not near genes chr2L_8_7325001 chr2L_7325001 RAL-177 209 chr2L 7331652 7331684 chr2L 7331750 7331786 9 102 4.0 3.5 3.8 1.9 134 chr2L 7331652 intergenic not near genes chr2L 7331719 intergenic not near genes chr2L 7331786 intergenic not near genes chr2L_9_7330001 chr2L_7330001 RAL-177 210 chr2L 7343314 7343346 chr2L 7350450 7350480 roo 4 7134 4.0 2.0 3.0 1.0 7166 chr2L 7343314 intron Wnt6 + chr2L 7346897 intron Wnt6 + chr2L 7350480 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-177 211 chr2L 7405760 7405768 chr2L 7405855 7405863 4 98 6.0 0.0 3.0 1.0 103 chr2L 7405760 exon CG5177 + chr2L 7405812 intron CG5177 + chr2L 7405863 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-177 212 chr2L 7555199 7555234 chr2L 7555296 7555331 12 96 0.0 5.5 2.8 3.2 132 chr2L 7555199 intron RapGAP1 - chr2L 7555265 intron RapGAP1 - chr2L 7555331 intron RapGAP1 - chr2L_12_7555001 chr2L_7555001 RAL-177 213 chr2L 7638837 7638886 chr2L 7639213 7639262 6 374 2.5 6.5 4.5 1.1 425 chr2L 7638837 intergenic not near genes chr2L 7639050 intergenic not near genes chr2L 7639262 intergenic not near genes chr2L_6_7635001 chr2L_7635001 RAL-177 214 chr2L 7748388 7748435 chr2L 7748497 7748544 15 109 4.0 8.0 6.0 2.1 156 chr2L 7748388 intergenic not near genes chr2L 7748466 intergenic not near genes chr2L 7748544 intergenic not near genes chr2L_15_7745001 chr2L_7745001 RAL-177 215 chr2L 7769785 7769836 chr2L 7769884 7769908 12 91 3.5 3.0 3.2 2.9 123 chr2L 7769785 intron CG7191 + chr2L 7769846 intron CG7191 + chr2L 7769908 intron CG7191 + chr2L_12_7765001 chr2L_7765001 RAL-177 216 chr2L 7775616 7775646 chr2L 7775728 7775733 7 108 8.0 5.0 6.5 0.9 117 chr2L 7775616 intergenic CG7179 - chr2L 7775674 intergenic CG7179 - chr2L 7775733 intergenic CG7179 - chr2L_7_7775001 chr2L_7775001 RAL-177 217 chr2L 7904402 7904410 chr2L 12617880 12617886 4 4713477 8.0 9.0 8.5 0.4 4713484 chr2L 7904402 intron Snoo - chr2L 10261144 intergenic Pten - chr2L 12617886 intron,intron nub +,Ref2 - chr2L_4_10260001 chr2L_10260001 RAL-177 218 chr2L 7922722 7922772 chr2L 7922823 7922873 22 100 5.0 6.5 5.8 3.2 151 chr2L 7922722 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922873 intron Snoo - chr2L_22_7920001 chr2L_7920001 RAL-177 219 chr2L 7959032 7959053 chr2L 7960463 7960484 pogo 8 1430 5.5 5.5 5.5 1.2 1452 chr2L 7959032 intron Snoo - chr2L 7959758 intron Snoo - chr2L 7960484 intron Snoo - chr2L_8_7955001 chr2L_7955001 RAL-177 220 chr2L 7997019 7997067 chr2L 7997139 7997187 24 120 4.5 4.5 4.5 4.4 168 chr2L 7997019 intron CG7227 - chr2L 7997103 intron CG7227 - chr2L 7997187 intron CG7227 - chr2L_24_7995001 chr2L_7995001 RAL-177 221 chr2L 8018816 8018829 chr2L 8023620 8023633 Doc 5 4804 0.5 13.0 6.8 0.6 4817 chr2L 8018816 intron Tg + chr2L 8021224 intron Tg + chr2L 8023633 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-177 222 chr2L 8044076 8044124 chr2L 8044174 8044223 18 98 2.0 2.5 2.2 5.6 147 chr2L 8044076 intron CG7466 + chr2L 8044150 intron CG7466 + chr2L 8044223 intron CG7466 + chr2L_18_8040001 chr2L_8040001 RAL-177 223 chr2L 8085284 8085317 chr2L 8085494 8085527 15 206 6.5 4.0 5.2 2.4 243 chr2L 8085284 intron Bsg + chr2L 8085406 intron Bsg + chr2L 8085527 intron Bsg + chr2L_15_8085001 chr2L_8085001 RAL-177 224 chr2L 8085318 8085330 chr2L 8085490 8085495 5 193 6.0 4.0 5.0 0.8 177 chr2L 8085318 intron Bsg + chr2L 8085406 intron Bsg + chr2L 8085495 intron Bsg + chr2L_5_8085001 chr2L_8085001 RAL-177 225 chr2L 8128009 8128037 chr2L 8128113 8128141 12 100 7.0 5.0 6.0 1.7 132 chr2L 8128009 intron CG8668 + chr2L 8128075 intron CG8668 + chr2L 8128141 intron CG8668 + chr2L_12_8125001 chr2L_8125001 RAL-177 226 chr2L 8128043 8128056 chr2L 8128134 8128160 5 101 5.0 9.0 7.0 0.6 117 chr2L 8128043 intron CG8668 + chr2L 8128102 intron CG8668 + chr2L 8128160 intron CG8668 + chr2L_5_8125001 chr2L_8125001 RAL-177 227 chr2L 8231919 8232022 chr2L 8232022 8232120 4 107 0.0 0.0 0.0 4.0 201 chr2L 8231919 intron Pvr - chr2L 8232020 intron Pvr - chr2L 8232120 intron Pvr - chr2L_4_8230001 chr2L_8230001 RAL-177 228 chr2L 8244713 8244749 chr2L 8244855 8244891 9 142 3.0 3.5 3.2 2.1 178 chr2L 8244713 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244891 intron CG8086 - chr2L_9_8240001 chr2L_8240001 RAL-177 229 chr2L 8258156 8258197 chr2L 8258263 8258314 11 116 6.5 7.5 7.0 1.4 158 chr2L 8258156 intergenic Btk29A -,mir-2b-1 - chr2L 8258235 intergenic Btk29A -,mir-2b-1 - chr2L 8258314 intergenic Btk29A -,mir-2b-1 - chr2L_11_8255001 chr2L_8255001 RAL-177 230 chr2L 8285006 8285036 chr2L 8285102 8285132 10 95 7.5 9.0 8.2 1.1 126 chr2L 8285006 intron Btk29A - chr2L 8285069 intron Btk29A - chr2L 8285132 intron Btk29A - chr2L_10_8285001 chr2L_8285001 RAL-177 231 chr2L 8287310 8287331 chr2L 8287560 8287571 6 248 2.0 3.5 2.8 1.6 261 chr2L 8287310 intron Btk29A - chr2L 8287440 intron Btk29A - chr2L 8287571 intron Btk29A - chr2L_6_8285001 chr2L_8285001 RAL-177 232 chr2L 8336926 8336967 chr2L 8337025 8337066 8 98 0.0 4.5 2.2 2.5 140 chr2L 8336926 intergenic not near genes chr2L 8336996 intergenic not near genes chr2L 8337066 intergenic not near genes chr2L_8_8335001 chr2L_8335001 RAL-177 233 chr2L 8452417 8452451 chr2L 8461598 8461642 roo 9 9190 2.5 5.5 4.0 1.8 9225 chr2L 8452417 intron fu12 - chr2L 8457030 intron fu12 - chr2L 8461642 intron fu12 - chr2L_9_8455001 chr2L_8455001 RAL-177 234 chr2L 8461822 8461874 chr2L 8461923 8461975 10 100 3.5 2.5 3.0 2.5 153 chr2L 8461822 intron fu12 - chr2L 8461898 intron fu12 - chr2L 8461975 intron fu12 - chr2L_10_8460001 chr2L_8460001 RAL-177 235 chr2L 8538148 8538157 chr2L 8538244 8538253 6 96 6.5 0.0 3.2 1.4 105 chr2L 8538148 intron CG17834 + chr2L 8538200 intron CG17834 + chr2L 8538253 intron CG17834 + chr2L_6_8535001 chr2L_8535001 RAL-177 236 chr2L 8554351 8554359 chr2L 8554467 8554475 4 116 3.5 2.5 3.0 1.0 124 chr2L 8554351 intron Sema-1a + chr2L 8554413 intron Sema-1a + chr2L 8554475 intron Sema-1a + chr2L_4_8550001 chr2L_8550001 RAL-177 237 chr2L 8554361 8554390 chr2L 8554455 8554506 13 112 2.0 2.5 2.2 4.1 145 chr2L 8554361 intron Sema-1a + chr2L 8554434 intron Sema-1a + chr2L 8554506 intron Sema-1a + chr2L_13_8550001 chr2L_8550001 RAL-177 238 chr2L 8586265 8586305 chr2L 8586362 8586402 9 93 3.5 2.0 2.8 2.4 137 chr2L 8586265 intron Sema-1a + chr2L 8586334 intron Sema-1a + chr2L 8586402 intron Sema-1a + chr2L_9_8585001 chr2L_8585001 RAL-177 239 chr2L 8594447 8594490 chr2L 8601520 8601564 297 7 7074 10.0 0.0 5.0 1.2 7117 chr2L 8594447 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601564 intron Sema-1a + chr2L_7_8595001 chr2L_8595001 RAL-177 240 chr2L 8612834 8612870 chr2L 8612931 8612967 16 97 3.0 5.5 4.2 3.1 133 chr2L 8612834 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612967 intron Sema-1a + chr2L_16_8610001 chr2L_8610001 RAL-177 241 chr2L 8723098 8723144 chr2L 8731495 8731541 Tirant 11 8395 1.5 4.0 2.8 2.9 8443 chr2L 8723098 intron raw - chr2L 8727320 intron raw - chr2L 8731541 intron raw - chr2L_11_8725001 chr2L_8725001 RAL-177 242 chr2L 8732927 8732978 chr2L 8733041 8733055 9 109 0.5 3.5 2.0 3.0 128 chr2L 8732927 intron raw - chr2L 8732991 intron raw - chr2L 8733055 intron raw - chr2L_9_8730001 chr2L_8730001 RAL-177 243 chr2L 8784316 8784361 chr2L 8784617 8784662 7 301 0.5 4.0 2.2 2.2 346 chr2L 8784316 intergenic not near genes chr2L 8784489 intergenic not near genes chr2L 8784662 intergenic not near genes chr2L_7_8780001 chr2L_8780001 RAL-177 244 chr2L 8799783 8799830 chr2L 8799919 8799960 15 134 2.0 9.0 5.5 2.3 177 chr2L 8799783 intergenic not near genes chr2L 8799872 intergenic not near genes chr2L 8799960 intergenic not near genes chr2L_15_8795001 chr2L_8795001 RAL-177 245 chr2L 9000259 9000312 chr2L 9007789 9007842 roo 17 7529 4.5 0.5 2.5 4.9 7583 chr2L 9000259 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007842 intergenic not near genes chr2L_17_9000001 chr2L_9000001 RAL-177 246 chr2L 9025804 9025815 chr2L 9025908 9025919 5 104 9.0 5.0 7.0 0.6 115 chr2L 9025804 intron,3` UTR CG9582 -,CR44352 - chr2L 9025862 intron,3` UTR CG9582 -,CR44352 - chr2L 9025919 intron,3` UTR CG9582 -,CR44352 - chr2L_5_9025001 chr2L_9025001 RAL-177 247 chr2L 9025816 9025849 chr2L 9025904 9025951 7 94 4.0 4.5 4.2 1.3 135 chr2L 9025816 intron,3` UTR CG9582 -,CR44352 - chr2L 9025884 intron,3` UTR CG9582 -,CR44352 - chr2L 9025951 intron,3` UTR CG9582 -,CR44352 - chr2L_7_9025001 chr2L_9025001 RAL-177 248 chr2L 9084339 9084340 chr2L 16217660 16217660 10 7133321 11.5 15.5 13.5 0.7 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-177 249 chr2L 9092002 9092045 chr2L 9092108 9092157 6 107 3.0 2.5 2.8 1.6 155 chr2L 9092002 intergenic not near genes chr2L 9092080 intergenic not near genes chr2L 9092157 intergenic not near genes chr2L_6_9090001 chr2L_9090001 RAL-177 250 chr2L 9095551 9095605 chr2L 9095658 9095712 19 103 6.0 4.0 5.0 3.2 161 chr2L 9095551 intergenic not near genes chr2L 9095632 intergenic not near genes chr2L 9095712 intergenic not near genes chr2L_19_9095001 chr2L_9095001 RAL-177 251 chr2L 9113781 9113810 chr2L 9113911 9113940 8 130 2.5 1.0 1.8 2.9 159 chr2L 9113781 intergenic Or30a + chr2L 9113860 intergenic not near genes chr2L 9113940 intergenic not near genes chr2L_8_9110001 chr2L_9110001 RAL-177 252 chr2L 9173069 9173093 chr2L 9173150 9173190 7 95 6.5 3.5 5.0 1.2 121 chr2L 9173069 intron tai + chr2L 9173130 intron tai + chr2L 9173190 intron tai + chr2L_7_9170001 chr2L_9170001 RAL-177 253 chr2L 9202035 9202067 chr2L 9202131 9202163 12 96 7.0 2.5 4.8 2.1 128 chr2L 9202035 intron tai + chr2L 9202099 intron tai + chr2L 9202163 intron tai + chr2L_12_9200001 chr2L_9200001 RAL-177 254 chr2L 9202070 9202082 chr2L 9202130 9202173 6 81 4.5 2.0 3.2 1.4 103 chr2L 9202070 intron tai + chr2L 9202122 intron tai + chr2L 9202173 intron tai + chr2L_6_9200001 chr2L_9200001 RAL-177 255 chr2L 9217962 9217994 chr2L 9222765 9222801 Doc 14 4804 7.0 6.5 6.8 1.8 4839 chr2L 9217962 intron tai + chr2L 9220382 intron tai + chr2L 9222801 intron tai + chr2L_14_9220001 chr2L_9220001 RAL-177 256 chr2L 9225834 9225870 chr2L 9225944 9225980 17 110 6.5 6.0 6.2 2.4 146 chr2L 9225834 intron tai + chr2L 9225907 intron tai + chr2L 9225980 intron tai + chr2L_17_9225001 chr2L_9225001 RAL-177 257 chr2L 9279967 9280020 chr2L 9280081 9280134 13 113 0.0 4.0 2.0 4.3 167 chr2L 9279967 intron Ggamma30A + chr2L 9280050 intron Ggamma30A + chr2L 9280134 intron Ggamma30A + chr2L_13_9280001 chr2L_9280001 RAL-177 258 chr2L 9297359 9297404 chr2L 9297456 9297501 16 97 3.5 4.5 4.0 3.2 142 chr2L 9297359 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_16_9295001 chr2L_9295001 RAL-177 259 chr2L 9356482 9356511 chr2L 9356579 9356608 9 97 5.5 1.5 3.5 2.0 126 chr2L 9356482 intergenic not near genes chr2L 9356545 intergenic not near genes chr2L 9356608 intergenic not near genes chr2L_9_9355001 chr2L_9355001 RAL-177 260 chr2L 9362128 9362139 chr2L 9362226 9362237 4 98 11.0 6.0 8.5 0.4 109 chr2L 9362128 intergenic not near genes chr2L 9362182 intergenic not near genes chr2L 9362237 intergenic not near genes chr2L_4_9360001 chr2L_9360001 RAL-177 261 chr2L 9380227 9380254 chr2L 9380342 9380369 13 114 5.0 4.0 4.5 2.4 142 chr2L 9380227 exon Shawl - chr2L 9380298 intron Shawl - chr2L 9380369 intron Shawl - chr2L_13_9380001 chr2L_9380001 RAL-177 262 chr2L 9383560 9383594 chr2L 9383648 9383692 15 96 0.0 0.5 0.2 12.5 132 chr2L 9383560 intron Shawl - chr2L 9383626 intron Shawl - chr2L 9383692 intron Shawl - chr2L_15_9380001 chr2L_9380001 RAL-177 263 chr2L 9387230 9387277 chr2L 9387348 9387395 19 118 5.0 2.5 3.8 4.0 165 chr2L 9387230 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387395 intron,5` UTR Shawl -,Aldh + chr2L_19_9385001 chr2L_9385001 RAL-177 264 chr2L 9393478 9393519 chr2L 9396465 9396506 jockey 15 2987 6.5 3.5 5.0 2.5 3028 chr2L 9393478 intron Shawl - chr2L 9394992 intron Shawl - chr2L 9396506 intron Shawl - chr2L_15_9390001 chr2L_9390001 RAL-177 265 chr2L 9446283 9446286 chr2L 9446387 9446390 4 104 0.0 0.0 0.0 4.0 107 chr2L 9446283 intron numb + chr2L 9446336 intron numb + chr2L 9446390 intron numb + chr2L_4_9445001 chr2L_9445001 RAL-177 266 chr2L 9490514 9490517 chr2L 9490609 9490617 4 99 13.5 2.0 7.8 0.5 103 chr2L 9490514 intergenic not near genes chr2L 9490566 intergenic not near genes chr2L 9490617 intergenic not near genes chr2L_4_9490001 chr2L_9490001 RAL-177 267 chr2L 9490518 9490551 chr2L 9490608 9490646 12 95 4.5 2.0 3.2 2.9 128 chr2L 9490518 intergenic not near genes chr2L 9490582 intergenic not near genes chr2L 9490646 intergenic not near genes chr2L_12_9490001 chr2L_9490001 RAL-177 268 chr2L 9524116 9524158 chr2L 9524226 9524268 6 109 5.0 3.0 4.0 1.2 152 chr2L 9524116 intron Oatp30B + chr2L 9524192 intron Oatp30B + chr2L 9524268 intron Oatp30B + chr2L_6_9520001 chr2L_9520001 RAL-177 269 chr2L 9543753 9543786 chr2L 9543850 9543861 9 94 0.0 0.5 0.2 7.5 108 chr2L 9543753 intergenic Cpr30B +,CG13113 + chr2L 9543807 intergenic Cpr30B +,CG13113 + chr2L 9543861 intergenic Cpr30B +,CG13113 + chr2L_9_9540001 chr2L_9540001 RAL-177 270 chr2L 9556890 9556912 chr2L 9557000 9557011 4 106 3.5 16.0 9.8 0.4 121 chr2L 9556890 intron jp - chr2L 9556950 intron jp - chr2L 9557011 intron jp - chr2L_4_9555001 chr2L_9555001 RAL-177 271 chr2L 9558319 9558329 chr2L 9558427 9558437 7 108 0.0 5.5 2.8 1.8 118 chr2L 9558319 intron jp - chr2L 9558378 intron jp - chr2L 9558437 intron jp - chr2L_7_9555001 chr2L_9555001 RAL-177 272 chr2L 9618874 9618912 chr2L 9618971 9619009 9 96 5.0 1.5 3.2 2.1 135 chr2L 9618874 intron GlcAT-S + chr2L 9618942 intron GlcAT-S + chr2L 9619009 intron GlcAT-S + chr2L_9_9615001 chr2L_9615001 RAL-177 273 chr2L 9828246 9828274 chr2L 9828345 9828374 7 96 3.5 6.0 4.8 1.2 128 chr2L 9828246 intron nAChRalpha6 - chr2L 9828310 intron nAChRalpha6 - chr2L 9828374 intron nAChRalpha6 - chr2L_7_9825001 chr2L_9825001 RAL-177 274 chr2L 9837435 9837447 chr2L 9837533 9837545 4 98 3.5 7.5 5.5 0.6 110 chr2L 9837435 intron nAChRalpha6 - chr2L 9837490 intron nAChRalpha6 - chr2L 9837545 intron nAChRalpha6 - chr2L_4_9835001 chr2L_9835001 RAL-177 275 chr2L 9873110 9873160 chr2L 9873406 9873446 10 294 4.5 0.0 2.2 3.1 336 chr2L 9873110 intron nAChRalpha6 - chr2L 9873278 intron nAChRalpha6 - chr2L 9873446 intron nAChRalpha6 - chr2L_10_9870001 chr2L_9870001 RAL-177 276 chr2L 9973718 9973757 chr2L 9980847 9980896 HMS-Beagle 16 7135 3.5 3.0 3.2 3.8 7178 chr2L 9973718 intergenic not near genes chr2L 9977307 intergenic not near genes chr2L 9980896 intergenic not near genes chr2L_16_9975001 chr2L_9975001 RAL-177 277 chr2L 9986340 9986377 chr2L 9986445 9986492 11 106 3.5 4.5 4.0 2.2 152 chr2L 9986340 intron bib + chr2L 9986416 intron bib + chr2L 9986492 intron bib + chr2L_11_9985001 chr2L_9985001 RAL-177 278 chr2L 10039093 10039130 chr2L 10039333 10039371 8 241 2.5 1.0 1.8 2.9 278 chr2L 10039093 intergenic obst-B + chr2L 10039232 intergenic obst-B + chr2L 10039371 intergenic obst-B + chr2L_8_10035001 chr2L_10035001 RAL-177 279 chr2L 10051737 10051752 chr2L 10051816 10051826 8 93 2.5 6.0 4.2 1.5 89 chr2L 10051737 5` UTR CR44874 + chr2L 10051782 5` UTR CR44874 + chr2L 10051826 5` UTR CR44874 + chr2L_8_10050001 chr2L_10050001 RAL-177 280 chr2L 10087459 10087487 chr2L 10087556 10087584 9 97 2.5 5.0 3.8 1.9 125 chr2L 10087459 intron CG44153 - chr2L 10087522 intron CG44153 - chr2L 10087584 intron CG44153 - chr2L_9_10085001 chr2L_10085001 RAL-177 281 chr2L 10095610 10095663 chr2L 10095710 10095763 19 98 4.5 5.0 4.8 3.3 153 chr2L 10095610 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095763 intron CG44153 - chr2L_19_10095001 chr2L_10095001 RAL-177 282 chr2L 10156319 10156354 chr2L 10163794 10163826 blood 16 7479 7.5 5.5 6.5 2.1 7507 chr2L 10156319 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163826 intron CG44153 - chr2L_16_10160001 chr2L_10160001 RAL-177 283 chr2L 10177878 10177930 chr2L 10177978 10178026 14 98 4.5 3.0 3.8 2.9 148 chr2L 10177878 intron CG44153 - chr2L 10177952 intron CG44153 - chr2L 10178026 intron CG44153 - chr2L_14_10175001 chr2L_10175001 RAL-177 284 chr2L 10232912 10232942 chr2L 10233010 10233040 12 97 3.5 7.0 5.2 1.9 128 chr2L 10232912 intron eEF1delta + chr2L 10232976 intron eEF1delta + chr2L 10233040 intron eEF1delta + chr2L_12_10230001 chr2L_10230001 RAL-177 285 chr2L 10294179 10294197 chr2L 10294275 10294293 5 96 1.5 5.0 3.2 1.2 114 chr2L 10294179 intron Hand - chr2L 10294236 intron Hand - chr2L 10294293 intron Hand - chr2L_5_10290001 chr2L_10290001 RAL-177 286 chr2L 10294662 10294690 chr2L 10294768 10294796 8 106 3.5 3.0 3.2 1.9 134 chr2L 10294662 intron Hand - chr2L 10294729 intron Hand - chr2L 10294796 intron Hand - chr2L_8_10290001 chr2L_10290001 RAL-177 287 chr2L 10480305 10480334 chr2L 10480403 10480432 5 98 3.5 0.5 2.0 1.7 127 chr2L 10480305 intron RluA-2 + chr2L 10480368 intron RluA-2 + chr2L 10480432 intron RluA-2 + chr2L_5_10480001 chr2L_10480001 RAL-177 288 chr2L 10515350 10515391 chr2L 10515463 10515489 15 112 3.0 5.0 4.0 3.0 139 chr2L 10515350 intron,intron CG45083 -,Fatp - chr2L 10515420 intron,intron CG45083 -,Fatp - chr2L 10515489 intron,intron CG45083 -,Fatp - chr2L_15_10515001 chr2L_10515001 RAL-177 289 chr2L 10527684 10527694 chr2L 10527845 10527855 5 161 11.5 7.5 9.5 0.5 171 chr2L 10527684 5` UTR Lip4 + chr2L 10527770 5` UTR Lip4 + chr2L 10527855 exon Lip4 + chr2L_5_10525001 chr2L_10525001 RAL-177 290 chr2L 10527701 10527718 chr2L 10527830 10527868 7 146 7.0 5.5 6.2 1.0 167 chr2L 10527701 5` UTR Lip4 + chr2L 10527784 5` UTR Lip4 + chr2L 10527868 intron Lip4 + chr2L_7_10525001 chr2L_10525001 RAL-177 291 chr2L 10531618 10531627 chr2L 10531714 10531739 4 108 0.0 9.0 4.5 0.7 121 chr2L 10531618 3` UTR Lip4 + chr2L 10531678 3` UTR Lip4 + chr2L 10531739 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 RAL-177 292 chr2L 10563899 10563948 chr2L 10564007 10564036 10 97 1.0 1.5 1.2 4.5 137 chr2L 10563899 intron Trim9 + chr2L 10563968 intron Trim9 + chr2L 10564036 intron Trim9 + chr2L_10_10560001 chr2L_10560001 RAL-177 293 chr2L 10572682 10572730 chr2L 10572783 10572831 14 101 2.0 5.0 3.5 3.1 149 chr2L 10572682 intron Trim9 + chr2L 10572756 intron Trim9 + chr2L 10572831 intron Trim9 + chr2L_14_10570001 chr2L_10570001 RAL-177 294 chr2L 10580770 10580802 chr2L 10580871 10580903 7 100 3.0 2.5 2.8 1.8 133 chr2L 10580770 intron Trim9 + chr2L 10580836 intron Trim9 + chr2L 10580903 intron Trim9 + chr2L_7_10580001 chr2L_10580001 RAL-177 295 chr2L 10592822 10592872 chr2L 10600504 10600554 opus 13 7681 4.0 4.5 4.2 2.5 7732 chr2L 10592822 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600554 intron Trim9 + chr2L_13_10595001 chr2L_10595001 RAL-177 296 chr2L 10604175 10604213 chr2L 10604279 10604315 9 102 8.5 0.0 4.2 1.7 140 chr2L 10604175 intron Trim9 + chr2L 10604245 intron Trim9 + chr2L 10604315 intron Trim9 + chr2L_9_10600001 chr2L_10600001 RAL-177 297 chr2L 10619216 10619260 chr2L 10619320 10619352 10 96 3.0 5.5 4.2 1.9 136 chr2L 10619216 intron Trim9 + chr2L 10619284 intron Trim9 + chr2L 10619352 intron Trim9 + chr2L_10_10615001 chr2L_10615001 RAL-177 298 chr2L 10623654 10623704 chr2L 10623896 10623946 16 235 5.5 4.0 4.8 2.8 292 chr2L 10623654 intron Trim9 + chr2L 10623800 intron Trim9 + chr2L 10623946 intron Trim9 + chr2L_16_10620001 chr2L_10620001 RAL-177 299 chr2L 10627048 10627091 chr2L 10627145 10627188 20 96 9.5 7.0 8.2 2.2 140 chr2L 10627048 3` UTR Trim9 + chr2L 10627118 3` UTR Trim9 + chr2L 10627188 3` UTR Trim9 + chr2L_20_10625001 chr2L_10625001 RAL-177 300 chr2L 10647584 10647614 chr2L 10647729 10647729 5 139 10.0 15.0 12.5 0.4 145 chr2L 10647584 exon CG17097 + chr2L 10647656 exon CG17097 + chr2L 10647729 exon CG17097 + chr2L_5_10645001 chr2L_10645001 RAL-177 301 chr2L 10682773 10682812 chr2L 10683003 10683042 16 230 1.5 4.5 3.0 4.0 269 chr2L 10682773 intergenic CG17107 + chr2L 10682908 intergenic CG17107 + chr2L 10683042 intergenic CG7299 - chr2L_16_10680001 chr2L_10680001 RAL-177 302 chr2L 10723517 10723543 chr2L 10723631 10723657 8 113 4.0 2.0 3.0 2.0 140 chr2L 10723517 intergenic not near genes chr2L 10723587 intergenic not near genes chr2L 10723657 intergenic not near genes chr2L_8_10720001 chr2L_10720001 RAL-177 303 chr2L 10762393 10762428 chr2L 10762490 10762525 10 97 5.0 1.5 3.2 2.4 132 chr2L 10762393 intron CG6495 + chr2L 10762459 intron CG6495 + chr2L 10762525 exon CG6495 + chr2L_10_10760001 chr2L_10760001 RAL-177 304 chr2L 10813657 10813702 chr2L 10813829 10813874 8 166 7.0 6.0 6.5 1.1 217 chr2L 10813657 intron Nos - chr2L 10813766 intron Nos - chr2L 10813874 intron Nos - chr2L_8_10810001 chr2L_10810001 RAL-177 305 chr2L 10836312 10836361 chr2L 10836413 10836462 21 99 2.5 4.0 3.2 5.0 150 chr2L 10836312 intron Nos - chr2L 10836387 intron Nos - chr2L 10836462 intron Nos - chr2L_21_10835001 chr2L_10835001 RAL-177 306 chr2L 10836739 10836748 chr2L 10836838 10836842 4 98 9.0 3.0 6.0 0.6 103 chr2L 10836739 intron Nos - chr2L 10836790 intron Nos - chr2L 10836842 intron Nos - chr2L_4_10835001 chr2L_10835001 RAL-177 307 chr2L 10850944 10850991 chr2L 10851044 10851093 5 101 3.0 0.0 1.5 2.0 149 chr2L 10850944 intron CG43129 + chr2L 10851018 intron CG43129 + chr2L 10851093 intron CG43129 + chr2L_5_10850001 chr2L_10850001 RAL-177 308 chr2L 10852148 10852182 chr2L 10852257 10852291 11 109 10.5 9.0 9.8 1.0 143 chr2L 10852148 intron CG43129 + chr2L 10852220 intron CG43129 + chr2L 10852291 intron CG43129 + chr2L_11_10850001 chr2L_10850001 RAL-177 309 chr2L 10862843 10862866 chr2L 10864457 10864459 Rt1c 11 1621 8.0 8.5 8.2 1.2 1616 chr2L 10862843 3` UTR CR43807 - chr2L 10863651 intron CR43807 - chr2L 10864459 intron CR43807 - chr2L_11_10860001 chr2L_10860001 RAL-177 310 chr2L 10891462 10891517 chr2L 10891596 10891651 17 126 3.5 2.0 2.8 4.5 189 chr2L 10891462 intergenic not near genes chr2L 10891556 intergenic not near genes chr2L 10891651 intergenic not near genes chr2L_17_10890001 chr2L_10890001 RAL-177 311 chr2L 10919782 10919828 chr2L 10919891 10919937 14 106 5.5 4.5 5.0 2.3 155 chr2L 10919782 intron dpr2 - chr2L 10919860 intron dpr2 - chr2L 10919937 intron dpr2 - chr2L_14_10915001 chr2L_10915001 RAL-177 312 chr2L 10945081 10945098 chr2L 10945168 10945180 4 87 3.0 7.5 5.2 0.6 99 chr2L 10945081 intron dpr2 - chr2L 10945130 intron dpr2 - chr2L 10945180 intron dpr2 - chr2L_4_10945001 chr2L_10945001 RAL-177 313 chr2L 10946939 10946972 chr2L 10956174 10956207 roo 8 9233 2.0 7.0 4.5 1.5 9268 chr2L 10946939 intron dpr2 - chr2L 10951573 intron dpr2 - chr2L 10956207 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-177 314 chr2L 11016665 11016680 chr2L 11016788 11016803 9 123 9.0 9.0 9.0 0.9 138 chr2L 11016665 intron Samuel - chr2L 11016734 intron Samuel - chr2L 11016803 intron Samuel - chr2L_9_11015001 chr2L_11015001 RAL-177 315 chr2L 11050905 11050951 chr2L 11051035 11051058 9 127 4.5 8.0 6.2 1.2 153 chr2L 11050905 intron Samuel - chr2L 11050982 intron Samuel - chr2L 11051058 intron Samuel - chr2L_9_11050001 chr2L_11050001 RAL-177 316 chr2L 11193583 11193598 chr2L 11193697 11193712 9 114 0.0 11.0 5.5 1.4 129 chr2L 11193583 intron Ca-beta - chr2L 11193648 intron Ca-beta - chr2L 11193712 intron Ca-beta - chr2L_9_11190001 chr2L_11190001 RAL-177 317 chr2L 11211134 11211159 chr2L 11211224 11211226 6 87 6.5 6.5 6.5 0.8 92 chr2L 11211134 intron ab + chr2L 11211180 intron ab + chr2L 11211226 intron ab + chr2L_6_11210001 chr2L_11210001 RAL-177 318 chr2L 11224038 11224091 chr2L 11224169 11224222 14 130 3.0 2.5 2.8 3.7 184 chr2L 11224038 intron ab + chr2L 11224130 intron ab + chr2L 11224222 intron ab + chr2L_14_11220001 chr2L_11220001 RAL-177 319 chr2L 11300644 11300691 chr2L 11300754 11300801 14 110 4.0 3.0 3.5 3.1 157 chr2L 11300644 intergenic not near genes chr2L 11300722 intergenic not near genes chr2L 11300801 intergenic not near genes chr2L_14_11300001 chr2L_11300001 RAL-177 320 chr2L 11315256 11315270 chr2L 11317679 11317682 G2 5 2420 4.5 1.0 2.8 1.3 2426 chr2L 11315256 intergenic not near genes chr2L 11316469 intergenic not near genes chr2L 11317682 intergenic not near genes chr2L_5_11315001 chr2L_11315001 RAL-177 321 chr2L 11379928 11379976 chr2L 11380030 11380078 4 102 7.0 0.0 3.5 0.9 150 chr2L 11379928 intergenic not near genes chr2L 11380003 intergenic not near genes chr2L 11380078 intergenic not near genes chr2L_4_11380001 chr2L_11380001 RAL-177 322 chr2L 11380601 11380639 chr2L 11380698 11380736 12 96 1.0 5.5 3.2 2.9 135 chr2L 11380601 intergenic not near genes chr2L 11380668 intergenic not near genes chr2L 11380736 intergenic not near genes chr2L_12_11380001 chr2L_11380001 RAL-177 323 chr2L 11399516 11399535 chr2L 11399613 11399632 9 95 2.0 0.0 1.0 4.5 116 chr2L 11399516 intergenic not near genes chr2L 11399574 intergenic not near genes chr2L 11399632 intergenic not near genes chr2L_9_11395001 chr2L_11395001 RAL-177 324 chr2L 11424419 11424469 chr2L 11424932 11424981 16 513 4.5 4.0 4.2 3.1 562 chr2L 11424419 intergenic not near genes chr2L 11424700 intergenic not near genes chr2L 11424981 intergenic not near genes chr2L_16_11420001 chr2L_11420001 RAL-177 325 chr2L 11444084 11444133 chr2L 11444433 11444489 7 354 4.0 0.0 2.0 2.3 405 chr2L 11444084 intron salm - chr2L 11444286 intron salm - chr2L 11444489 intron salm - chr2L_7_11440001 chr2L_11440001 RAL-177 326 chr2L 11450112 11450155 chr2L 11450218 11450257 6 101 0.0 2.0 1.0 3.0 145 chr2L 11450112 intergenic not near genes chr2L 11450184 intergenic not near genes chr2L 11450257 intergenic not near genes chr2L_6_11450001 chr2L_11450001 RAL-177 327 chr2L 11458926 11458975 chr2L 11459062 11459111 23 135 4.5 6.5 5.5 3.5 185 chr2L 11458926 intergenic not near genes chr2L 11459018 intergenic not near genes chr2L 11459111 intergenic not near genes chr2L_23_11455001 chr2L_11455001 RAL-177 328 chr2L 11491111 11491160 chr2L 11491210 11491213 10 89 0.0 3.0 1.5 4.0 102 chr2L 11491111 intergenic not near genes chr2L 11491162 intergenic not near genes chr2L 11491213 intergenic not near genes chr2L_10_11490001 chr2L_11490001 RAL-177 329 chr2L 11540306 11540352 chr2L 11540486 11540532 13 178 6.0 5.5 5.8 1.9 226 chr2L 11540306 intergenic not near genes chr2L 11540419 intergenic not near genes chr2L 11540532 intergenic not near genes chr2L_13_11540001 chr2L_11540001 RAL-177 330 chr2L 11540573 11540615 chr2L 11547995 11548037 Tabor 11 7422 5.5 9.5 7.5 1.3 7464 chr2L 11540573 intergenic not near genes chr2L 11544305 intergenic not near genes chr2L 11548037 intergenic not near genes chr2L_11_11540001 chr2L_11540001 RAL-177 331 chr2L 11550613 11550666 chr2L 11550722 11550775 22 108 4.0 3.5 3.8 4.6 162 chr2L 11550613 intergenic not near genes chr2L 11550694 intergenic not near genes chr2L 11550775 intergenic not near genes chr2L_22_11550001 chr2L_11550001 RAL-177 332 chr2L 11563621 11563641 chr2L 11568845 11568864 copia 6 5223 9.0 6.5 7.8 0.7 5243 chr2L 11563621 intergenic not near genes chr2L 11566242 intergenic not near genes chr2L 11568864 intergenic not near genes chr2L_6_11565001 chr2L_11565001 RAL-177 333 chr2L 11597756 11597778 chr2L 11597857 11597879 8 100 2.0 5.0 3.5 1.8 123 chr2L 11597756 intron kek2 + chr2L 11597818 intron kek2 + chr2L 11597879 intron kek2 + chr2L_8_11595001 chr2L_11595001 RAL-177 334 chr2L 11657951 11658002 chr2L 11658056 11658107 12 104 2.5 1.5 2.0 4.0 156 chr2L 11657951 3` UTR CG43167 + chr2L 11658029 intergenic CG43167 + chr2L 11658107 intergenic CG43167 + chr2L_12_11655001 chr2L_11655001 RAL-177 335 chr2L 11672116 11672166 chr2L 11672243 11672293 16 127 3.0 4.0 3.5 3.6 177 chr2L 11672116 intergenic not near genes chr2L 11672204 intergenic not near genes chr2L 11672293 intergenic not near genes chr2L_16_11670001 chr2L_11670001 RAL-177 336 chr2L 11710144 11710154 chr2L 11710240 11710250 4 96 3.0 0.0 1.5 1.6 106 chr2L 11710144 intergenic not near genes chr2L 11710197 intergenic not near genes chr2L 11710250 intergenic not near genes chr2L_4_11710001 chr2L_11710001 RAL-177 337 chr2L 11713488 11713537 chr2L 11720976 11721025 blood 9 7485 2.5 1.0 1.8 3.2 7537 chr2L 11713488 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721025 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-177 338 chr2L 11781022 11781194 chr2L 11781126 11781290 10 99 0.0 0.0 0.0 10.0 268 chr2L 11781022 intergenic not near genes chr2L 11781156 intergenic not near genes chr2L 11781290 intergenic not near genes chr2L_10_11780001 chr2L_11780001 RAL-177 339 chr2L 11820427 11820464 chr2L 11820528 11820565 17 101 0.5 11.5 6.0 2.4 138 chr2L 11820427 intron Pde1c - chr2L 11820496 intron Pde1c - chr2L 11820565 intron Pde1c - chr2L_17_11820001 chr2L_11820001 RAL-177 340 chr2L 11823585 11823605 chr2L 11823683 11823703 5 98 0.0 4.0 2.0 1.7 118 chr2L 11823585 intron Pde1c - chr2L 11823644 intron Pde1c - chr2L 11823703 intron Pde1c - chr2L_5_11820001 chr2L_11820001 RAL-177 341 chr2L 11828428 11828464 chr2L 11828524 11828560 10 96 4.0 6.0 5.0 1.7 132 chr2L 11828428 intron,intron Pde1c -,esc - chr2L 11828494 intron,intron Pde1c -,esc - chr2L 11828560 intron,intron Pde1c -,esc - chr2L_10_11825001 chr2L_11825001 RAL-177 342 chr2L 11841326 11841343 chr2L 11841443 11841460 5 117 8.0 0.0 4.0 1.0 134 chr2L 11841326 intron Pde1c - chr2L 11841393 intron Pde1c - chr2L 11841460 intron Pde1c - chr2L_5_11840001 chr2L_11840001 RAL-177 343 chr2L 11862339 11862390 chr2L 11862452 11862473 23 111 3.0 4.5 3.8 4.8 134 chr2L 11862339 intron Pde1c - chr2L 11862406 intron Pde1c - chr2L 11862473 intron Pde1c - chr2L_23_11860001 chr2L_11860001 RAL-177 344 chr2L 11874874 11874926 chr2L 11874975 11875027 9 100 0.0 4.5 2.2 2.8 153 chr2L 11874874 intron Pde1c - chr2L 11874950 intron Pde1c - chr2L 11875027 intron Pde1c - chr2L_9_11870001 chr2L_11870001 RAL-177 345 chr2L 12025863 12025905 chr2L 12026015 12026061 14 153 5.5 0.5 3.0 3.5 198 chr2L 12025863 intergenic not near genes chr2L 12025962 intergenic not near genes chr2L 12026061 intergenic not near genes chr2L_14_12025001 chr2L_12025001 RAL-177 346 chr2L 12031374 12031419 chr2L 12031475 12031520 19 100 5.0 5.0 5.0 3.2 146 chr2L 12031374 intron dmGlut + chr2L 12031447 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_19_12030001 chr2L_12030001 RAL-177 347 chr2L 12067313 12067355 chr2L 12074385 12074427 297 19 7072 5.5 5.0 5.2 3.1 7114 chr2L 12067313 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074427 intergenic not near genes chr2L_19_12070001 chr2L_12070001 RAL-177 348 chr2L 12129834 12129889 chr2L 12129934 12129989 19 99 6.5 6.0 6.2 2.6 155 chr2L 12129834 3` UTR CG17211 + chr2L 12129912 intergenic CG17211 + chr2L 12129989 intergenic CG17211 + chr2L_19_12125001 chr2L_12125001 RAL-177 349 chr2L 12132703 12132748 chr2L 12132809 12132854 17 105 0.0 1.0 0.5 11.3 151 chr2L 12132703 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132854 intron rho-6 - chr2L_17_12130001 chr2L_12130001 RAL-177 350 chr2L 12169531 12169577 chr2L 12169631 12169677 20 100 7.0 0.5 3.8 4.2 146 chr2L 12169531 3` UTR CG31760 + chr2L 12169604 3` UTR CG31760 + chr2L 12169677 3` UTR CG31760 + chr2L_20_12165001 chr2L_12165001 RAL-177 351 chr2L 12175797 12175848 chr2L 12175896 12175950 11 101 2.5 0.0 1.2 5.0 153 chr2L 12175797 intron,intron aret +,atilla - chr2L 12175874 intron,intron aret +,atilla - chr2L 12175950 intron,intron aret +,atilla - chr2L_11_12175001 chr2L_12175001 RAL-177 352 chr2L 12269833 12269843 chr2L 12270068 12270078 7 235 5.0 8.5 6.8 0.9 245 chr2L 12269833 intron aret + chr2L 12269956 intron aret + chr2L 12270078 intron aret + chr2L_7_12265001 chr2L_12265001 RAL-177 353 chr2L 12272165 12272196 chr2L 12272261 12272292 9 96 0.5 10.0 5.2 1.5 127 chr2L 12272165 intron aret + chr2L 12272228 intron aret + chr2L 12272292 intron aret + chr2L_9_12270001 chr2L_12270001 RAL-177 354 chr2L 12305389 12305422 chr2L 12305497 12305530 9 108 6.5 2.0 4.2 1.7 141 chr2L 12305389 intron aret + chr2L 12305460 intron aret + chr2L 12305530 intron aret + chr2L_9_12305001 chr2L_12305001 RAL-177 355 chr2L 12322455 12322497 chr2L 12322626 12322668 11 170 5.5 4.5 5.0 1.8 213 chr2L 12322455 intergenic not near genes chr2L 12322562 intergenic not near genes chr2L 12322668 intergenic not near genes chr2L_11_12320001 chr2L_12320001 RAL-177 356 chr2L 12366842 12366885 chr2L 12366948 12366991 16 105 6.5 5.5 6.0 2.3 149 chr2L 12366842 intron bru-2 + chr2L 12366916 intron bru-2 + chr2L 12366991 intron bru-2 + chr2L_16_12365001 chr2L_12365001 RAL-177 357 chr2L 12373085 12373085 chr2L 15974279 15974279 4 3601194 14.5 26.5 20.5 0.2 3601194 chr2L 12373085 intron bru-2 + chr2L 14173682 intron CG43333 - chr2L 15974279 intergenic not near genes chr2L_4_14170001 chr2L_14170001 RAL-177 358 chr2L 12387909 12387945 chr2L 12388023 12388060 7 108 6.0 4.5 5.2 1.1 151 chr2L 12387909 intron bru-2 + chr2L 12387984 intron bru-2 + chr2L 12388060 intron bru-2 + chr2L_7_12385001 chr2L_12385001 RAL-177 359 chr2L 12394968 12394999 chr2L 12395100 12395131 12 132 4.0 7.0 5.5 1.8 163 chr2L 12394968 intron bru-2 + chr2L 12395050 intron bru-2 + chr2L 12395131 intron bru-2 + chr2L_12_12395001 chr2L_12395001 RAL-177 360 chr2L 12420950 12421001 chr2L 12421301 12421352 9 346 4.0 0.0 2.0 3.0 402 chr2L 12420950 intron vir-1 - chr2L 12421151 intron vir-1 - chr2L 12421352 intron vir-1 - chr2L_9_12420001 chr2L_12420001 RAL-177 361 chr2L 12424344 12424380 chr2L 12424438 12424476 9 95 0.5 8.0 4.2 1.7 132 chr2L 12424344 intergenic not near genes chr2L 12424410 intergenic CG6405 + chr2L 12424476 intergenic CG6405 + chr2L_9_12420001 chr2L_12420001 RAL-177 362 chr2L 12487874 12487892 chr2L 12487969 12487985 7 94 5.0 3.0 4.0 1.4 111 chr2L 12487874 intron bun - chr2L 12487930 intron bun - chr2L 12487985 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-177 363 chr2L 12529230 12529434 chr2L 12529378 12529520 15 133 0.0 0.0 0.0 15.0 290 chr2L 12529230 intron bun - chr2L 12529375 intron bun - chr2L 12529520 intron bun - chr2L_15_12525001 chr2L_12525001 RAL-177 364 chr2L 12558320 12558337 chr2L 12565452 12565486 HMS-Beagle 5 7141 7.0 3.5 5.2 0.8 7166 chr2L 12558320 intergenic not near genes chr2L 12561903 intergenic not near genes chr2L 12565486 intergenic not near genes chr2L_5_12560001 chr2L_12560001 RAL-177 365 chr2L 12558341 12558351 chr2L 12565449 12565500 HMS-Beagle 5 7141 3.5 2.5 3.0 1.2 7159 chr2L 12558341 intergenic not near genes chr2L 12561920 intergenic not near genes chr2L 12565500 intergenic not near genes chr2L_5_12560001 chr2L_12560001 RAL-177 366 chr2L 12638756 12638808 chr2L 12638879 12638930 20 122 3.0 5.5 4.2 3.8 174 chr2L 12638756 intron Ref2 - chr2L 12638843 intron Ref2 - chr2L 12638930 intron Ref2 - chr2L_20_12635001 chr2L_12635001 RAL-177 367 chr2L 12731038 12731082 chr2L 12735825 12735869 F-element 29 4786 6.0 5.0 5.5 4.5 4831 chr2L 12731038 intron MRP + chr2L 12733454 intron MRP + chr2L 12735869 intron MRP + chr2L_29_12730001 chr2L_12730001 RAL-177 368 chr2L 12739157 12739198 chr2L 12743958 12743999 Doc 23 4801 6.0 4.0 5.0 3.8 4842 chr2L 12739157 exon MRP + chr2L 12741578 intron MRP + chr2L 12743999 exon MRP + chr2L_23_12740001 chr2L_12740001 RAL-177 369 chr2L 12751288 12751338 chr2L 12751391 12751441 7 101 1.0 3.5 2.2 2.2 153 chr2L 12751288 intergenic not near genes chr2L 12751364 intergenic not near genes chr2L 12751441 intergenic not near genes chr2L_7_12750001 chr2L_12750001 RAL-177 370 chr2L 12763806 12763866 chr2L 12764038 12764086 BS 8 225 0.0 0.0 0.0 8.0 280 chr2L 12763806 intergenic not near genes chr2L 12763946 intergenic not near genes chr2L 12764086 intergenic not near genes chr2L_8_12760001 chr2L_12760001 RAL-177 371 chr2L 12781782 12781812 chr2L 12789245 12789275 Quasimodo 9 7462 7.0 4.0 5.5 1.4 7493 chr2L 12781782 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789275 intergenic not near genes chr2L_9_12785001 chr2L_12785001 RAL-177 372 chr2L 12791589 12791628 chr2L 12795284 12795323 F-element 11 3693 3.5 5.5 4.5 2.0 3734 chr2L 12791589 intergenic not near genes chr2L 12793456 intergenic not near genes chr2L 12795323 intergenic not near genes chr2L_11_12790001 chr2L_12790001 RAL-177 373 chr2L 12835533 12835540 chr2L 12835662 12835669 5 129 7.5 2.5 5.0 0.8 136 chr2L 12835533 intergenic not near genes chr2L 12835601 intergenic not near genes chr2L 12835669 intergenic not near genes chr2L_5_12835001 chr2L_12835001 RAL-177 374 chr2L 12835547 12835558 chr2L 12835670 12835687 4 126 3.5 2.5 3.0 1.0 140 chr2L 12835547 intergenic not near genes chr2L 12835617 intergenic not near genes chr2L 12835687 intergenic not near genes chr2L_4_12835001 chr2L_12835001 RAL-177 375 chr2L 12835559 12835585 chr2L 12835666 12835714 8 126 1.0 2.5 1.8 2.9 155 chr2L 12835559 intergenic not near genes chr2L 12835636 intergenic not near genes chr2L 12835714 intergenic not near genes chr2L_8_12835001 chr2L_12835001 RAL-177 376 chr2L 12855289 12855328 chr2L 12855394 12855433 9 105 0.0 2.0 1.0 4.5 144 chr2L 12855289 intergenic not near genes chr2L 12855361 intergenic not near genes chr2L 12855433 intergenic not near genes chr2L_9_12855001 chr2L_12855001 RAL-177 377 chr2L 12861675 12861727 chr2L 12863162 12863214 hobo 17 1483 3.0 3.0 3.0 4.2 1539 chr2L 12861675 intergenic not near genes chr2L 12862444 intergenic not near genes chr2L 12863214 intergenic not near genes chr2L_17_12860001 chr2L_12860001 RAL-177 378 chr2L 12894007 12894049 chr2L 12895494 12895536 hobo 7 1477 4.0 8.0 6.0 1.0 1529 chr2L 12894007 intergenic not near genes chr2L 12894772 intergenic not near genes chr2L 12895536 intergenic not near genes chr2L_7_12890001 chr2L_12890001 RAL-177 379 chr2L 12905456 12905499 chr2L 12905560 12905603 16 104 6.0 2.0 4.0 3.2 147 chr2L 12905456 intergenic not near genes chr2L 12905530 intergenic not near genes chr2L 12905603 intergenic not near genes chr2L_16_12905001 chr2L_12905001 RAL-177 380 chr2L 12933831 12933880 chr2L 12941317 12941367 blood 10 7484 4.5 3.5 4.0 2.0 7536 chr2L 12933831 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941367 intergenic not near genes chr2L_10_12935001 chr2L_12935001 RAL-177 381 chr2L 12944916 12944960 chr2L 12945086 12945128 6 169 5.5 0.0 2.8 1.6 212 chr2L 12944916 intergenic not near genes chr2L 12945022 intergenic not near genes chr2L 12945128 intergenic not near genes chr2L_6_12945001 chr2L_12945001 RAL-177 382 chr2L 13076298 13076328 chr2L 13076416 13076446 9 117 21.5 23.5 22.5 0.4 148 chr2L 13076298 intergenic not near genes chr2L 13076372 intergenic not near genes chr2L 13076446 intergenic not near genes chr2L_9_13075001 chr2L_13075001 RAL-177 383 chr2L 13076151 13076202 chr2L 13076485 13076536 19 334 27.0 29.0 28.0 0.7 385 chr2L 13076151 intergenic not near genes chr2L 13076344 intergenic not near genes chr2L 13076536 intergenic not near genes chr2L_19_13075001 chr2L_13075001 RAL-177 384 chr2L 13147933 13147959 chr2L 13148024 13148060 12 100 5.5 3.0 4.2 2.3 127 chr2L 13147933 intergenic not near genes chr2L 13147996 intergenic not near genes chr2L 13148060 intergenic not near genes chr2L_12_13145001 chr2L_13145001 RAL-177 385 chr2L 13154095 13154119 chr2L 13154192 13154216 8 97 9.5 0.0 4.8 1.4 121 chr2L 13154095 intergenic not near genes chr2L 13154156 intergenic not near genes chr2L 13154216 intergenic not near genes chr2L_8_13150001 chr2L_13150001 RAL-177 386 chr2L 13266369 13266381 chr2L 13266472 13266489 6 105 4.0 8.5 6.2 0.8 120 chr2L 13266369 intron CG44085 + chr2L 13266429 intron CG44085 + chr2L 13266489 intron CG44085 + chr2L_6_13265001 chr2L_13265001 RAL-177 387 chr2L 13266384 13266410 chr2L 13266469 13266518 8 103 3.0 5.5 4.2 1.5 134 chr2L 13266384 intron CG44085 + chr2L 13266451 intron CG44085 + chr2L 13266518 intron CG44085 + chr2L_8_13265001 chr2L_13265001 RAL-177 388 chr2L 13346027 13346071 chr2L 13346130 13346175 7 104 5.0 8.0 6.5 0.9 148 chr2L 13346027 intergenic not near genes chr2L 13346101 intergenic not near genes chr2L 13346175 intergenic not near genes chr2L_7_13345001 chr2L_13345001 RAL-177 389 chr2L 13405631 13405670 chr2L 13410448 13410487 Doc 16 4815 1.5 10.0 5.8 2.4 4856 chr2L 13405631 exon CG7110 + chr2L 13408059 intron CG7110 + chr2L 13410487 intron CG7110 + chr2L_16_13405001 chr2L_13405001 RAL-177 390 chr2L 13422488 13422498 chr2L 13422587 13422597 5 99 0.0 8.0 4.0 1.0 109 chr2L 13422488 intron CG42784 + chr2L 13422542 intron CG42784 + chr2L 13422597 intron CG42784 + chr2L_5_13420001 chr2L_13420001 RAL-177 391 chr2L 13449446 13449494 chr2L 13456902 13456950 Quasimodo 13 7456 8.0 6.0 7.0 1.6 7504 chr2L 13449446 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456950 intron CG42784 + chr2L_13_13450001 chr2L_13450001 RAL-177 392 chr2L 13481449 13481466 chr2L 13482054 13482093 jockey 8 622 8.0 3.5 5.8 1.2 644 chr2L 13481449 intron CG42784 + chr2L 13481771 intron CG42784 + chr2L 13482093 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-177 393 chr2L 13522263 13522284 chr2L 13527589 13527609 Transpac 9 5325 7.5 9.5 8.5 0.9 5346 chr2L 13522263 intron B4 - chr2L 13524936 intron B4 - chr2L 13527609 intron B4 - chr2L_9_13520001 chr2L_13520001 RAL-177 394 chr2L 13556395 13556403 chr2L 13556492 13556498 4 96 13.0 8.0 10.5 0.3 103 chr2L 13556395 intron kuz + chr2L 13556446 intron kuz + chr2L 13556498 intron kuz + chr2L_4_13555001 chr2L_13555001 RAL-177 395 chr2L 13556405 13556439 chr2L 13556488 13556535 13 92 7.0 8.0 7.5 1.5 130 chr2L 13556405 intron kuz + chr2L 13556470 intron kuz + chr2L 13556535 intron kuz + chr2L_13_13555001 chr2L_13555001 RAL-177 396 chr2L 13560381 13560416 chr2L 13565222 13565247 F-element 14 4839 10.0 5.5 7.8 1.6 4866 chr2L 13560381 intron kuz + chr2L 13562814 intron kuz + chr2L 13565247 intron kuz + chr2L_14_13560001 chr2L_13560001 RAL-177 397 chr2L 13567445 13567488 chr2L 13567543 13567564 8 94 0.5 4.0 2.2 2.5 119 chr2L 13567445 intron kuz + chr2L 13567504 intron kuz + chr2L 13567564 intron kuz + chr2L_8_13565001 chr2L_13565001 RAL-177 398 chr2L 13644496 13644546 chr2L 13644595 13644645 12 95 4.5 2.5 3.5 2.7 149 chr2L 13644496 intergenic not near genes chr2L 13644570 intergenic not near genes chr2L 13644645 intergenic not near genes chr2L_12_13640001 chr2L_13640001 RAL-177 399 chr2L 13713538 13713571 chr2L 13713634 13713647 17 94 5.5 0.0 2.8 4.5 109 chr2L 13713538 intron CG31814 - chr2L 13713592 intron CG31814 - chr2L 13713647 intron CG31814 - chr2L_17_13710001 chr2L_13710001 RAL-177 400 chr2L 13853070 13853114 chr2L 13862240 13862276 roo 11 9169 4.0 4.5 4.2 2.1 9206 chr2L 13853070 intron CenG1A + chr2L 13857673 intron CenG1A + chr2L 13862276 intron CenG1A + chr2L_11_13855001 chr2L_13855001 RAL-177 401 chr2L 13862316 13862354 chr2L 13862419 13862467 13 112 4.0 4.0 4.0 2.6 151 chr2L 13862316 intron CenG1A + chr2L 13862392 intron CenG1A + chr2L 13862467 intron CenG1A + chr2L_13_13860001 chr2L_13860001 RAL-177 402 chr2L 13972326 13972361 chr2L 13972871 13972906 15 545 5.0 3.0 4.0 3.0 580 chr2L 13972326 exon He - chr2L 13972616 intron He - chr2L 13972906 5` UTR He - chr2L_15_13970001 chr2L_13970001 RAL-177 403 chr2L 13998913 13998957 chr2L 13999015 13999055 6 105 2.5 0.0 1.2 2.7 142 chr2L 13998913 intron rk - chr2L 13998984 intron rk - chr2L 13999055 intron rk - chr2L_6_13995001 chr2L_13995001 RAL-177 404 chr2L 14020401 14020408 chr2L 14020503 14020510 5 102 5.5 6.0 5.8 0.7 109 chr2L 14020401 intergenic CR44849 +,NimC3 - chr2L 14020456 intergenic CR44849 +,NimC3 - chr2L 14020510 intergenic CR44849 +,NimC3 - chr2L_5_14020001 chr2L_14020001 RAL-177 405 chr2L 14064441 14064476 chr2L 14064532 14064571 10 95 1.5 4.5 3.0 2.5 130 chr2L 14064441 intron nAChRalpha5 + chr2L 14064506 intron nAChRalpha5 + chr2L 14064571 intron nAChRalpha5 + chr2L_10_14060001 chr2L_14060001 RAL-177 406 chr2L 14102845 14102854 chr2L 14102946 14102955 8 101 0.0 0.0 0.0 8.0 110 chr2L 14102845 intergenic not near genes chr2L 14102900 intergenic not near genes chr2L 14102955 intergenic not near genes chr2L_8_14100001 chr2L_14100001 RAL-177 407 chr2L 14148654 14148700 chr2L 14148792 14148838 22 138 5.5 3.5 4.5 4.0 184 chr2L 14148654 intron CG17341 + chr2L 14148746 intron CG17341 + chr2L 14148838 intron CG17341 + chr2L_22_14145001 chr2L_14145001 RAL-177 408 chr2L 14162134 14162139 chr2L 14162268 14162273 4 134 3.5 26.0 14.8 0.3 139 chr2L 14162134 exon CG43332 - chr2L 14162204 exon CG43332 - chr2L 14162273 exon CG43332 - chr2L_4_14160001 chr2L_14160001 RAL-177 409 chr2L 14180048 14180089 chr2L 14180142 14180185 17 95 5.0 7.5 6.2 2.4 137 chr2L 14180048 intron CG43333 - chr2L 14180116 intron CG43333 - chr2L 14180185 intron CG43333 - chr2L_17_14180001 chr2L_14180001 RAL-177 410 chr2L 14246286 14246315 chr2L 14246384 14246413 9 96 1.0 5.5 3.2 2.1 127 chr2L 14246286 intergenic not near genes chr2L 14246350 intergenic not near genes chr2L 14246413 intergenic not near genes chr2L_9_14245001 chr2L_14245001 RAL-177 411 chr2L 14333800 14333846 chr2L 14333899 14333945 16 99 2.0 5.5 3.8 3.3 145 chr2L 14333800 3` UTR ms(2)34Fe + chr2L 14333872 intergenic ms(2)34Fe +,CG33090 + chr2L 14333945 intergenic ms(2)34Fe +,CG33090 + chr2L_16_14330001 chr2L_14330001 RAL-177 412 chr2L 14532193 14532218 chr2L 14532293 14532301 9 95 3.5 9.5 6.5 1.2 108 chr2L 14532193 intergenic CR44852 - chr2L 14532247 intergenic CR44852 - chr2L 14532301 intergenic CR44852 - chr2L_9_14530001 chr2L_14530001 RAL-177 413 chr2L 14557228 14557276 chr2L 14557344 14557375 10 110 5.5 3.0 4.2 1.9 147 chr2L 14557228 intergenic not near genes chr2L 14557302 intergenic not near genes chr2L 14557375 intergenic not near genes chr2L_10_14555001 chr2L_14555001 RAL-177 414 chr2L 14575504 14575544 chr2L 14575770 14575810 5 266 2.0 5.0 3.5 1.1 306 chr2L 14575504 intergenic not near genes chr2L 14575657 intergenic not near genes chr2L 14575810 intergenic not near genes chr2L_5_14575001 chr2L_14575001 RAL-177 415 chr2L 14577932 14577952 chr2L 14578198 14578204 11 276 3.5 3.0 3.2 2.6 272 chr2L 14577932 intergenic not near genes chr2L 14578068 intergenic not near genes chr2L 14578204 intergenic not near genes chr2L_11_14575001 chr2L_14575001 RAL-177 416 chr2L 14588367 14588383 chr2L 14588541 14588557 7 174 8.5 2.0 5.2 1.1 190 chr2L 14588367 intergenic CG42680 - chr2L 14588462 intergenic CG42680 - chr2L 14588557 intergenic CG42680 - chr2L_7_14585001 chr2L_14585001 RAL-177 417 chr2L 14588384 14588419 chr2L 14588540 14588593 15 172 6.0 2.0 4.0 3.0 209 chr2L 14588384 intergenic CG42680 - chr2L 14588488 intergenic CG42680 - chr2L 14588593 intergenic CG42680 - chr2L_15_14585001 chr2L_14585001 RAL-177 418 chr2L 14601958 14601997 chr2L 14602061 14602101 13 104 3.5 7.0 5.2 2.1 143 chr2L 14601958 exon osp - chr2L 14602030 intron osp - chr2L 14602101 intron osp - chr2L_13_14600001 chr2L_14600001 RAL-177 419 chr2L 14642553 14642599 chr2L 14651736 14651782 roo 17 9181 6.5 5.5 6.0 2.4 9229 chr2L 14642553 intron osp - chr2L 14647168 intron osp - chr2L 14651782 intron osp - chr2L_17_14645001 chr2L_14645001 RAL-177 420 chr2L 14677516 14677551 chr2L 14678636 14678671 11 1119 4.0 1.5 2.8 2.9 1155 chr2L 14677516 intron osp - chr2L 14678094 intron osp - chr2L 14678671 intron osp - chr2L_11_14675001 chr2L_14675001 RAL-177 421 chr2L 14694237 14694288 chr2L 14694381 14694432 24 144 6.5 2.5 4.5 4.4 195 chr2L 14694237 intergenic not near genes chr2L 14694334 intergenic not near genes chr2L 14694432 intergenic not near genes chr2L_24_14690001 chr2L_14690001 RAL-177 422 chr2L 14707187 14707237 chr2L 14707326 14707376 18 138 9.0 1.5 5.2 2.9 189 chr2L 14707187 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707376 intergenic not near genes chr2L_18_14705001 chr2L_14705001 RAL-177 423 chr2L 14707575 14707596 chr2L 14708600 14708621 4 1025 7.5 12.0 9.8 0.4 1046 chr2L 14707575 intergenic not near genes chr2L 14708098 intergenic not near genes chr2L 14708621 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-177 424 chr2L 14707598 14707617 chr2L 14708623 14708642 9 1025 9.0 18.0 13.5 0.6 1044 chr2L 14707598 intergenic not near genes chr2L 14708120 intergenic not near genes chr2L 14708642 intergenic not near genes chr2L_9_14705001 chr2L_14705001 RAL-177 425 chr2L 14706743 14706779 chr2L 14708994 14709022 9 2243 25.5 33.5 29.5 0.3 2279 chr2L 14706743 intergenic not near genes chr2L 14707882 intergenic not near genes chr2L 14709022 intergenic not near genes chr2L_9_14705001 chr2L_14705001 RAL-177 426 chr2L 14803883 14803909 chr2L 14809086 14809132 copia 8 5215 3.0 4.5 3.8 1.7 5249 chr2L 14803883 intergenic not near genes chr2L 14806508 intergenic not near genes chr2L 14809132 intergenic not near genes chr2L_8_14805001 chr2L_14805001 RAL-177 427 chr2L 14840956 14841010 chr2L 14841064 14841117 9 107 4.0 3.5 3.8 1.9 161 chr2L 14840956 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841117 3` UTR CR43805 - chr2L_9_14840001 chr2L_14840001 RAL-177 428 chr2L 14887671 14887699 chr2L 14887769 14887797 13 98 6.5 3.5 5.0 2.2 126 chr2L 14887671 intergenic not near genes chr2L 14887734 intergenic not near genes chr2L 14887797 intergenic not near genes chr2L_13_14885001 chr2L_14885001 RAL-177 429 chr2L 14889934 14889983 chr2L 14890379 14890415 jockey 5 442 3.0 3.5 3.2 1.2 481 chr2L 14889934 intergenic not near genes chr2L 14890174 intergenic not near genes chr2L 14890415 intergenic not near genes chr2L_5_14890001 chr2L_14890001 RAL-177 430 chr2L 14923092 14923121 chr2L 14923192 14923221 13 99 4.0 5.0 4.5 2.4 129 chr2L 14923092 intron CG42313 - chr2L 14923156 intron CG42313 - chr2L 14923221 intron CG42313 - chr2L_13_14920001 chr2L_14920001 RAL-177 431 chr2L 14923126 14923132 chr2L 14923190 14923232 5 87 4.0 5.0 4.5 0.9 106 chr2L 14923126 intron CG42313 - chr2L 14923179 intron CG42313 - chr2L 14923232 intron CG42313 - chr2L_5_14920001 chr2L_14920001 RAL-177 432 chr2L 14942153 14942183 chr2L 14942255 14942285 6 102 5.5 5.0 5.2 1.0 132 chr2L 14942153 intron CG42313 - chr2L 14942219 intron CG42313 - chr2L 14942285 intron CG42313 - chr2L_6_14940001 chr2L_14940001 RAL-177 433 chr2L 14984378 14984402 chr2L 14991977 14992024 opus 8 7618 6.5 2.0 4.2 1.5 7646 chr2L 14984378 intron mol - chr2L 14988201 intron mol - chr2L 14992024 intron mol - chr2L_8_14985001 chr2L_14985001 RAL-177 434 chr2L 15003525 15003572 chr2L 15003629 15003676 11 104 2.0 4.5 3.2 2.6 151 chr2L 15003525 intergenic not near genes chr2L 15003600 intergenic not near genes chr2L 15003676 intergenic not near genes chr2L_11_15000001 chr2L_15000001 RAL-177 435 chr2L 15013132 15013180 chr2L 15013256 15013309 14 125 3.5 7.0 5.2 2.3 177 chr2L 15013132 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013309 intergenic not near genes chr2L_14_15010001 chr2L_15010001 RAL-177 436 chr2L 15014602 15014650 chr2L 15014701 15014749 13 97 0.0 8.0 4.0 2.6 147 chr2L 15014602 intergenic not near genes chr2L 15014676 intergenic not near genes chr2L 15014749 intergenic not near genes chr2L_13_15010001 chr2L_15010001 RAL-177 437 chr2L 15031537 15031554 chr2L 15031797 15031799 9 257 13.5 3.0 8.2 1.0 262 chr2L 15031537 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031668 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031799 intron GABA-B-R1 + chr2L_9_15030001 chr2L_15030001 RAL-177 438 chr2L 15031556 15031578 chr2L 15031791 15031808 7 246 4.5 2.5 3.5 1.6 252 chr2L 15031556 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031682 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031808 intron GABA-B-R1 + chr2L_7_15030001 chr2L_15030001 RAL-177 439 chr2L 15044708 15044729 chr2L 15044804 15044825 6 96 5.5 0.0 2.8 1.6 117 chr2L 15044708 intergenic ck - chr2L 15044766 intergenic ck - chr2L 15044825 intergenic ck - chr2L_6_15040001 chr2L_15040001 RAL-177 440 chr2L 15078052 15078101 chr2L 15078160 15078204 20 105 3.0 4.5 3.8 4.2 152 chr2L 15078052 intron CG15270 + chr2L 15078128 intron CG15270 + chr2L 15078204 intron CG15270 + chr2L_20_15075001 chr2L_15075001 RAL-177 441 chr2L 15098527 15098541 chr2L 15098627 15098636 7 99 7.0 5.0 6.0 1.0 109 chr2L 15098527 intergenic not near genes chr2L 15098582 intergenic not near genes chr2L 15098636 intergenic not near genes chr2L_7_15095001 chr2L_15095001 RAL-177 442 chr2L 15104697 15104720 chr2L 15104804 15104808 5 105 5.5 2.0 3.8 1.0 111 chr2L 15104697 intergenic not near genes chr2L 15104752 intergenic not near genes chr2L 15104808 intergenic not near genes chr2L_5_15100001 chr2L_15100001 RAL-177 443 chr2L 15104730 15104735 chr2L 15104801 15104818 4 87 4.5 2.0 3.2 1.0 88 chr2L 15104730 intergenic not near genes chr2L 15104774 intergenic not near genes chr2L 15104818 intergenic not near genes chr2L_4_15100001 chr2L_15100001 RAL-177 444 chr2L 15108477 15108532 chr2L 15108640 15108689 13 162 5.5 2.5 4.0 2.6 212 chr2L 15108477 intergenic not near genes chr2L 15108583 intergenic not near genes chr2L 15108689 intergenic not near genes chr2L_13_15105001 chr2L_15105001 RAL-177 445 chr2L 15120349 15120365 chr2L 15120489 15120501 7 143 7.0 3.5 5.2 1.1 152 chr2L 15120349 5` UTR CR43853 + chr2L 15120425 5` UTR CR43853 + chr2L 15120501 5` UTR CR43853 + chr2L_7_15120001 chr2L_15120001 RAL-177 446 chr2L 15122790 15122803 chr2L 15122890 15122903 5 100 0.0 9.5 4.8 0.9 113 chr2L 15122790 intergenic not near genes chr2L 15122846 intergenic not near genes chr2L 15122903 intergenic not near genes chr2L_5_15120001 chr2L_15120001 RAL-177 447 chr2L 15138754 15138801 chr2L 15138857 15138908 8 103 0.0 4.0 2.0 2.7 154 chr2L 15138754 intergenic not near genes chr2L 15138831 intergenic not near genes chr2L 15138908 intergenic not near genes chr2L_8_15135001 chr2L_15135001 RAL-177 448 chr2L 15156579 15156632 chr2L 15156681 15156734 10 102 5.5 3.0 4.2 1.9 155 chr2L 15156579 intergenic not near genes chr2L 15156656 intergenic not near genes chr2L 15156734 intergenic not near genes chr2L_10_15155001 chr2L_15155001 RAL-177 449 chr2L 15226379 15226396 chr2L 15226444 15226492 5 85 5.0 3.5 4.2 1.0 113 chr2L 15226379 intergenic not near genes chr2L 15226436 intergenic not near genes chr2L 15226492 intergenic not near genes chr2L_5_15225001 chr2L_15225001 RAL-177 450 chr2L 15244029 15244072 chr2L 15244162 15244205 22 132 2.0 5.0 3.5 4.9 176 chr2L 15244029 intron ZnT35C - chr2L 15244117 intron ZnT35C - chr2L 15244205 intron ZnT35C - chr2L_22_15240001 chr2L_15240001 RAL-177 451 chr2L 15354906 15354949 chr2L 15355015 15355058 21 108 5.0 1.0 3.0 5.2 152 chr2L 15354906 intergenic not near genes chr2L 15354982 intergenic not near genes chr2L 15355058 intergenic not near genes chr2L_21_15350001 chr2L_15350001 RAL-177 452 chr2L 15387352 15387407 chr2L 15387452 15387507 8 100 2.0 0.0 1.0 4.0 155 chr2L 15387352 intergenic not near genes chr2L 15387430 intergenic not near genes chr2L 15387507 intergenic not near genes chr2L_8_15385001 chr2L_15385001 RAL-177 453 chr2L 15445633 15445669 chr2L 15445734 15445769 5 91 6.0 3.0 4.5 0.9 136 chr2L 15445633 intergenic not near genes chr2L 15445701 intergenic not near genes chr2L 15445769 intergenic not near genes chr2L_5_15445001 chr2L_15445001 RAL-177 454 chr2L 15446037 15446080 chr2L 15453526 15453569 blood 12 7488 2.5 7.0 4.8 2.1 7532 chr2L 15446037 intergenic not near genes chr2L 15449803 intergenic not near genes chr2L 15453569 intergenic not near genes chr2L_12_15445001 chr2L_15445001 RAL-177 455 chr2L 15476381 15476423 chr2L 15476560 15476602 14 179 3.5 4.0 3.8 2.9 221 chr2L 15476381 intergenic sna - chr2L 15476492 intergenic sna - chr2L 15476602 3` UTR sna - chr2L_14_15475001 chr2L_15475001 RAL-177 456 chr2L 15482573 15482606 chr2L 15482714 15482762 17 149 2.5 4.5 3.5 3.8 189 chr2L 15482573 intergenic not near genes chr2L 15482668 intergenic not near genes chr2L 15482762 intergenic not near genes chr2L_17_15480001 chr2L_15480001 RAL-177 457 chr2L 15490030 15490046 chr2L 15490166 15490182 7 136 0.0 9.5 4.8 1.2 152 chr2L 15490030 intergenic not near genes chr2L 15490106 intergenic not near genes chr2L 15490182 intergenic not near genes chr2L_7_15490001 chr2L_15490001 RAL-177 458 chr2L 15514305 15514330 chr2L 15514409 15514434 8 104 9.5 7.0 8.2 0.9 129 chr2L 15514305 intergenic not near genes chr2L 15514370 intergenic not near genes chr2L 15514434 intergenic not near genes chr2L_8_15510001 chr2L_15510001 RAL-177 459 chr2L 15586393 15586440 chr2L 15593465 15593512 297 24 7071 8.5 4.5 6.5 3.2 7119 chr2L 15586393 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593512 intergenic not near genes chr2L_24_15585001 chr2L_15585001 RAL-177 460 chr2L 15598772 15598799 chr2L 15598871 15598898 7 99 5.5 0.0 2.8 1.8 126 chr2L 15598772 intergenic not near genes chr2L 15598835 intergenic not near genes chr2L 15598898 intergenic not near genes chr2L_7_15595001 chr2L_15595001 RAL-177 461 chr2L 15636660 15636680 chr2L 15636756 15636775 8 95 6.0 0.5 3.2 1.9 115 chr2L 15636660 intergenic not near genes chr2L 15636718 intergenic not near genes chr2L 15636775 intergenic not near genes chr2L_8_15635001 chr2L_15635001 RAL-177 462 chr2L 15642950 15642978 chr2L 15643056 15643083 8 106 6.0 7.0 6.5 1.1 133 chr2L 15642950 intergenic not near genes chr2L 15643016 intergenic not near genes chr2L 15643083 intergenic not near genes chr2L_8_15640001 chr2L_15640001 RAL-177 463 chr2L 15734293 15734324 chr2L 15734392 15734422 8 97 0.0 7.0 3.5 1.8 129 chr2L 15734293 intron CycE - chr2L 15734358 intron CycE - chr2L 15734422 intron CycE - chr2L_8_15730001 chr2L_15730001 RAL-177 464 chr2L 15823331 15823370 chr2L 15823427 15823466 14 96 5.0 3.5 4.2 2.7 135 chr2L 15823331 intergenic CR44601 - chr2L 15823398 intergenic CR44601 - chr2L 15823466 intergenic not near genes chr2L_14_15820001 chr2L_15820001 RAL-177 465 chr2L 15826876 15826892 chr2L 15829290 15829306 Tabor 6 2414 3.0 10.0 6.5 0.8 2430 chr2L 15826876 intergenic not near genes chr2L 15828091 intergenic not near genes chr2L 15829306 intergenic not near genes chr2L_6_15825001 chr2L_15825001 RAL-177 466 chr2L 15935169 15935220 chr2L 15935278 15935330 18 108 4.0 1.0 2.5 5.1 161 chr2L 15935169 intron beat-Ib - chr2L 15935250 intron beat-Ib - chr2L 15935330 intron beat-Ib - chr2L_18_15935001 chr2L_15935001 RAL-177 467 chr2L 15956004 15956046 chr2L 15957491 15957528 hobo 12 1486 9.0 3.5 6.2 1.7 1524 chr2L 15956004 intron beat-Ib - chr2L 15956766 intron beat-Ib - chr2L 15957528 intron beat-Ib - chr2L_12_15955001 chr2L_15955001 RAL-177 468 chr2L 16001448 16001494 chr2L 16001556 16001602 17 108 0.0 4.5 2.2 5.3 154 chr2L 16001448 intron beat-Ic + chr2L 16001525 intron beat-Ic + chr2L 16001602 intron beat-Ic + chr2L_17_16000001 chr2L_16000001 RAL-177 469 chr2L 16008671 16008719 chr2L 16008769 16008817 8 98 4.0 4.0 4.0 1.6 146 chr2L 16008671 intron beat-Ic + chr2L 16008744 intron beat-Ic + chr2L 16008817 intron beat-Ic + chr2L_8_16005001 chr2L_16005001 RAL-177 470 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 13 145889 14.5 15.5 15.0 0.8 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-177 471 chr2L 16115502 16115546 chr2L 16115598 16115642 11 96 1.5 5.0 3.2 2.6 140 chr2L 16115502 intergenic not near genes chr2L 16115572 intergenic not near genes chr2L 16115642 intergenic not near genes chr2L_11_16115001 chr2L_16115001 RAL-177 472 chr2L 16141173 16141188 chr2L 16146400 16146415 copia 7 5227 0.0 7.0 3.5 1.6 5242 chr2L 16141173 intergenic not near genes chr2L 16143794 intergenic not near genes chr2L 16146415 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-177 473 chr2L 16153723 16153748 chr2L 16160811 16160836 297 9 7087 2.5 2.5 2.5 2.6 7113 chr2L 16153723 intergenic not near genes chr2L 16157280 intergenic not near genes chr2L 16160836 intergenic not near genes chr2L_9_16155001 chr2L_16155001 RAL-177 474 chr2L 16197101 16197151 chr2L 16197796 16197827 7 693 0.0 2.5 1.2 3.2 726 chr2L 16197101 intergenic not near genes chr2L 16197464 intergenic not near genes chr2L 16197827 intergenic not near genes chr2L_7_16195001 chr2L_16195001 RAL-177 475 chr2L 9084340 9084340 chr2L 16217660 16217660 4 7133320 11.5 15.5 13.5 0.3 7133320 chr2L 9084340 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-177 476 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 10 145889 14.5 15.5 15.0 0.6 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-177 477 chr2L 16224783 16224972 chr2L 16224912 16225055 13 120 2.5 1.5 2.0 4.3 272 chr2L 16224783 intergenic not near genes chr2L 16224919 intergenic not near genes chr2L 16225055 intergenic not near genes chr2L_13_16220001 chr2L_16220001 RAL-177 478 chr2L 16242055 16242085 chr2L 16242167 16242197 4 112 3.5 0.0 1.8 1.4 142 chr2L 16242055 5` UTR CG42818 + chr2L 16242126 exon CG42818 + chr2L 16242197 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-177 479 chr2L 16243691 16243842 chr2L 16243794 16243957 9 109 1.0 1.0 1.0 4.5 266 chr2L 16243691 exon CG42818 + chr2L 16243824 exon CG42818 + chr2L 16243957 exon CG42818 + chr2L_9_16240001 chr2L_16240001 RAL-177 480 chr2L 16263977 16263988 chr2L 16264088 16264099 6 111 11.0 6.5 8.8 0.6 122 chr2L 16263977 3` UTR crp - chr2L 16264038 3` UTR crp - chr2L 16264099 3` UTR crp - chr2L_6_16260001 chr2L_16260001 RAL-177 481 chr2L 16263989 16264007 chr2L 16264080 16264118 10 106 7.0 5.0 6.0 1.4 129 chr2L 16263989 3` UTR crp - chr2L 16264054 3` UTR crp - chr2L 16264118 3` UTR crp - chr2L_10_16260001 chr2L_16260001 RAL-177 482 chr2L 16280235 16280274 chr2L 16281423 16281443 1360 8 1181 6.0 2.5 4.2 1.5 1208 chr2L 16280235 intron crp - chr2L 16280839 intron crp - chr2L 16281443 intron crp - chr2L_8_16280001 chr2L_16280001 RAL-177 483 chr2L 16434087 16434100 chr2L 16434189 16434202 6 102 7.0 2.5 4.8 1.0 115 chr2L 16434087 intron CG5888 - chr2L 16434144 intron CG5888 - chr2L 16434202 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-177 484 chr2L 16434103 16434128 chr2L 16434205 16434230 9 102 4.0 5.0 4.5 1.6 127 chr2L 16434103 intron CG5888 - chr2L 16434166 intron CG5888 - chr2L 16434230 intron CG5888 - chr2L_9_16430001 chr2L_16430001 RAL-177 485 chr2L 16497116 16497142 chr2L 16497191 16497238 6 92 3.0 2.0 2.5 1.7 122 chr2L 16497116 intron Tpr2 + chr2L 16497177 intron Tpr2 + chr2L 16497238 intron Tpr2 + chr2L_6_16495001 chr2L_16495001 RAL-177 486 chr2L 16504978 16505016 chr2L 16505100 16505146 19 129 0.0 5.0 2.5 5.4 168 chr2L 16504978 intron Tpr2 + chr2L 16505062 intron Tpr2 + chr2L 16505146 intron Tpr2 + chr2L_19_16505001 chr2L_16505001 RAL-177 487 chr2L 16511968 16511995 chr2L 16519115 16519142 HMS-Beagle 15 7146 5.5 6.0 5.8 2.2 7174 chr2L 16511968 intron CG5953 - chr2L 16515555 intron CG5953 - chr2L 16519142 intron CG5953 - chr2L_15_16515001 chr2L_16515001 RAL-177 488 chr2L 16548462 16548486 chr2L 16548604 16548627 4 140 4.5 0.0 2.2 1.2 165 chr2L 16548462 intron CG42389 + chr2L 16548544 intron CG42389 + chr2L 16548627 intron CG42389 + chr2L_4_16545001 chr2L_16545001 RAL-177 489 chr2L 16572192 16572220 chr2L 16572305 16572333 13 111 5.0 0.5 2.8 3.4 141 chr2L 16572192 intron CG42389 + chr2L 16572262 intron CG42389 + chr2L 16572333 intron CG42389 + chr2L_13_16570001 chr2L_16570001 RAL-177 490 chr2L 16589802 16589823 chr2L 16589912 16589933 7 110 6.0 5.0 5.5 1.1 131 chr2L 16589802 intron CG42389 + chr2L 16589868 intron CG42389 + chr2L 16589933 intron CG42389 + chr2L_7_16585001 chr2L_16585001 RAL-177 491 chr2L 16654682 16654735 chr2L 16654795 16654848 21 112 4.0 5.0 4.5 3.8 166 chr2L 16654682 intron CG42389 + chr2L 16654765 intron CG42389 + chr2L 16654848 intron CG42389 + chr2L_21_16650001 chr2L_16650001 RAL-177 492 chr2L 16670400 16670448 chr2L 16670497 16670545 24 95 5.5 4.0 4.8 4.1 145 chr2L 16670400 intron Trpgamma - chr2L 16670472 intron Trpgamma - chr2L 16670545 intron Trpgamma - chr2L_24_16670001 chr2L_16670001 RAL-177 493 chr2L 16764949 16764995 chr2L 16765049 16765095 20 100 9.0 4.5 6.8 2.6 146 chr2L 16764949 intergenic not near genes chr2L 16765022 intergenic not near genes chr2L 16765095 intergenic not near genes chr2L_20_16765001 chr2L_16765001 RAL-177 494 chr2L 16809628 16809658 chr2L 16809776 16809806 9 148 0.0 0.0 0.0 9.0 178 chr2L 16809628 intron,intron CG13280 -,CG13272 + chr2L 16809717 intron,intron CG13280 -,CG13272 + chr2L 16809806 intron,intron CG13280 -,CG13272 + chr2L_9_16805001 chr2L_16805001 RAL-177 495 chr2L 16852252 16852282 chr2L 16858045 16858075 Doc3-element 6 5794 25.5 11.0 18.2 0.3 5823 chr2L 16852252 exon CG31810 - chr2L 16855164 intron CG31809 - chr2L 16858075 intron CG31809 - chr2L_6_16855001 chr2L_16855001 RAL-177 496 chr2L 16867007 16867035 chr2L 16867122 16867150 9 113 2.5 6.5 4.5 1.6 143 chr2L 16867007 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867150 intergenic not near genes chr2L_9_16865001 chr2L_16865001 RAL-177 497 chr2L 16952665 16952714 chr2L 16952794 16952843 11 129 2.0 4.0 3.0 2.8 178 chr2L 16952665 intergenic not near genes chr2L 16952754 intergenic not near genes chr2L 16952843 intergenic not near genes chr2L_11_16950001 chr2L_16950001 RAL-177 498 chr2L 16958090 16958133 chr2L 16962896 16962941 Doc 22 4808 2.5 6.0 4.2 4.2 4851 chr2L 16958090 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962941 intergenic not near genes chr2L_22_16960001 chr2L_16960001 RAL-177 499 chr2L 17003710 17003762 chr2L 17003856 17003908 13 144 2.0 3.5 2.8 3.4 198 chr2L 17003710 intergenic not near genes chr2L 17003809 intergenic not near genes chr2L 17003908 intergenic not near genes chr2L_13_17000001 chr2L_17000001 RAL-177 500 chr2L 17032484 17032517 chr2L 17032589 17032622 8 105 2.0 2.5 2.2 2.5 138 chr2L 17032484 intergenic not near genes chr2L 17032553 intergenic not near genes chr2L 17032622 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-177 501 chr2L 17033899 17033944 chr2L 17034004 17034049 9 104 2.0 3.0 2.5 2.6 150 chr2L 17033899 intergenic not near genes chr2L 17033974 intergenic not near genes chr2L 17034049 intergenic not near genes chr2L_9_17030001 chr2L_17030001 RAL-177 502 chr2L 17052391 17052444 chr2L 17052523 17052576 15 131 5.0 3.0 4.0 3.0 185 chr2L 17052391 intergenic not near genes chr2L 17052484 intergenic not near genes chr2L 17052576 intergenic not near genes chr2L_15_17050001 chr2L_17050001 RAL-177 503 chr2L 17053268 17053312 chr2L 17053698 17053740 5 426 1.0 0.0 0.5 3.3 472 chr2L 17053268 intergenic not near genes chr2L 17053504 intergenic not near genes chr2L 17053740 intergenic not near genes chr2L_5_17050001 chr2L_17050001 RAL-177 504 chr2L 17054260 17054300 chr2L 17054372 17054374 6 106 3.0 0.0 1.5 2.4 114 chr2L 17054260 intergenic not near genes chr2L 17054317 intergenic not near genes chr2L 17054374 intergenic not near genes chr2L_6_17050001 chr2L_17050001 RAL-177 505 chr2L 17062735 17062760 chr2L 17062837 17062862 16 102 4.5 3.0 3.8 3.3 127 chr2L 17062735 intergenic not near genes chr2L 17062798 intergenic not near genes chr2L 17062862 intergenic not near genes chr2L_16_17060001 chr2L_17060001 RAL-177 506 chr2L 17122765 17122809 chr2L 17122863 17122894 8 93 2.0 4.0 3.0 2.0 129 chr2L 17122765 intergenic not near genes chr2L 17122830 intergenic CG31784 - chr2L 17122894 intergenic CG31784 - chr2L_8_17120001 chr2L_17120001 RAL-177 507 chr2L 8894666 8894666 chr2L 17158908 17158908 10 8264242 8.0 23.5 15.8 0.6 8264242 chr2L 8894666 intergenic not near genes chr2L 13026787 intron CG9932 - chr2L 17158908 intron,intron CG34106 +,beat-IIIa + chr2L_10_13025001 chr2L_13025001 RAL-177 508 chr2L 17167552 17167589 chr2L 17167813 17167850 pogo 8 261 2.0 7.0 4.5 1.5 298 chr2L 17167552 intron,intron CG34106 +,beat-IIIa + chr2L 17167701 intron,intron CG34106 +,beat-IIIa + chr2L 17167850 intron,intron CG34106 +,beat-IIIa + chr2L_8_17165001 chr2L_17165001 RAL-177 509 chr2L 17199152 17199178 chr2L 17200639 17200665 hobo 8 1487 4.5 4.0 4.2 1.5 1513 chr2L 17199152 intron beat-IIIc - chr2L 17199908 intron beat-IIIc - chr2L 17200665 intron beat-IIIc - chr2L_8_17195001 chr2L_17195001 RAL-177 510 chr2L 17260858 17260897 chr2L 17260961 17260980 9 99 3.0 2.0 2.5 2.6 122 chr2L 17260858 intergenic beat-IIIc - chr2L 17260919 intergenic beat-IIIc - chr2L 17260980 intergenic beat-IIIc - chr2L_9_17260001 chr2L_17260001 RAL-177 511 chr2L 17273180 17273221 chr2L 17277983 17278024 F-element 7 4802 2.0 5.0 3.5 1.6 4844 chr2L 17273180 intergenic not near genes chr2L 17275602 intergenic not near genes chr2L 17278024 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-177 512 chr2L 17327902 17327907 chr2L 17328008 17328008 4 105 7.0 8.0 7.5 0.5 106 chr2L 17327902 intergenic not near genes chr2L 17327955 intergenic not near genes chr2L 17328008 intergenic not near genes chr2L_4_17325001 chr2L_17325001 RAL-177 513 chr2L 17327908 17327926 chr2L 17328004 17328032 7 104 4.0 8.0 6.0 1.0 124 chr2L 17327908 intergenic not near genes chr2L 17327970 intergenic not near genes chr2L 17328032 intergenic not near genes chr2L_7_17325001 chr2L_17325001 RAL-177 514 chr2L 17351931 17351954 chr2L 17352053 17352076 10 122 3.5 8.0 5.8 1.5 145 chr2L 17351931 intergenic not near genes chr2L 17352004 intergenic not near genes chr2L 17352076 intergenic not near genes chr2L_10_17350001 chr2L_17350001 RAL-177 515 chr2L 17360017 17360044 chr2L 17360215 17360242 12 198 1.5 0.0 0.8 6.7 225 chr2L 17360017 intergenic not near genes chr2L 17360130 intergenic not near genes chr2L 17360242 intergenic not near genes chr2L_12_17360001 chr2L_17360001 RAL-177 516 chr2L 17372326 17372367 chr2L 17372426 17372466 10 100 2.5 6.0 4.2 1.9 140 chr2L 17372326 intron Lrch - chr2L 17372396 intron Lrch - chr2L 17372466 intron Lrch - chr2L_10_17370001 chr2L_17370001 RAL-177 517 chr2L 17372368 17372369 chr2L 17372422 17372469 8 78 1.5 5.5 3.5 1.8 101 chr2L 17372368 intron Lrch - chr2L 17372418 intron Lrch - chr2L 17372469 intron Lrch - chr2L_8_17370001 chr2L_17370001 RAL-177 518 chr2L 17425750 17425796 chr2L 17425897 17425943 15 144 5.0 6.5 5.8 2.2 193 chr2L 17425750 intron Dif - chr2L 17425846 intron Dif - chr2L 17425943 intron Dif - chr2L_15_17425001 chr2L_17425001 RAL-177 519 chr2L 17432014 17432019 chr2L 17432141 17432146 1360 6 127 0.0 9.5 4.8 1.0 132 chr2L 17432014 intron Dif - chr2L 17432080 intron Dif - chr2L 17432146 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-177 520 chr2L 17432021 17432039 chr2L 17432138 17432166 1360 9 125 0.0 9.5 4.8 1.6 145 chr2L 17432021 intron Dif - chr2L 17432094 intron Dif - chr2L 17432166 intron Dif - chr2L_9_17430001 chr2L_17430001 RAL-177 521 chr2L 17511614 17511660 chr2L 17511776 17511822 5 162 4.0 1.0 2.5 1.4 208 chr2L 17511614 intron Dhc36C + chr2L 17511718 intron Dhc36C + chr2L 17511822 exon Dhc36C + chr2L_5_17510001 chr2L_17510001 RAL-177 522 chr2L 17626585 17626635 chr2L 17626699 17626749 18 113 6.0 3.5 4.8 3.1 164 chr2L 17626585 intergenic CG15147 - chr2L 17626667 intergenic CG15147 - chr2L 17626749 intergenic CG15147 - chr2L_18_17625001 chr2L_17625001 RAL-177 523 chr2L 17675935 17675973 chr2L 17676034 17676072 9 99 2.5 5.5 4.0 1.8 137 chr2L 17675935 intron CadN - chr2L 17676004 intron CadN - chr2L 17676072 intron CadN - chr2L_9_17675001 chr2L_17675001 RAL-177 524 chr2L 17687508 17687519 chr2L 17692272 17692284 F-element 5 4764 4.5 6.0 5.2 0.8 4776 chr2L 17687508 intron CadN - chr2L 17689896 intron CadN - chr2L 17692284 intron CadN - chr2L_5_17685001 chr2L_17685001 RAL-177 525 chr2L 17692941 17692953 chr2L 17693075 17693087 7 134 4.0 3.0 3.5 1.6 146 chr2L 17692941 intron CadN - chr2L 17693014 intron CadN - chr2L 17693087 intron CadN - chr2L_7_17690001 chr2L_17690001 RAL-177 526 chr2L 17769412 17769463 chr2L 17769530 17769581 7 115 3.0 4.0 3.5 1.6 169 chr2L 17769412 intron CadN - chr2L 17769496 intron CadN - chr2L 17769581 intron CadN - chr2L_7_17765001 chr2L_17765001 RAL-177 527 chr2L 17819902 17819953 chr2L 17825125 17825172 copia 6 5222 5.0 4.5 4.8 1.0 5270 chr2L 17819902 intron CadN2 - chr2L 17822537 intron CadN2 - chr2L 17825172 intron CadN2 - chr2L_6_17820001 chr2L_17820001 RAL-177 528 chr2L 17855475 17855506 chr2L 17855573 17855604 10 96 7.5 3.5 5.5 1.5 129 chr2L 17855475 intron CadN2 - chr2L 17855540 intron CadN2 - chr2L 17855604 intron CadN2 - chr2L_10_17855001 chr2L_17855001 RAL-177 529 chr2L 17880580 17880596 chr2L 17880712 17880713 4 128 7.0 3.0 5.0 0.7 133 chr2L 17880580 intergenic not near genes chr2L 17880646 intergenic not near genes chr2L 17880713 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-177 530 chr2L 17880599 17880612 chr2L 17880711 17880744 8 128 5.0 2.5 3.8 1.7 145 chr2L 17880599 intergenic not near genes chr2L 17880672 intergenic not near genes chr2L 17880744 intergenic not near genes chr2L_8_17880001 chr2L_17880001 RAL-177 531 chr2L 17946897 17946940 chr2L 17947097 17947140 16 200 4.0 3.5 3.8 3.3 243 chr2L 17946897 intergenic not near genes chr2L 17947018 intergenic not near genes chr2L 17947140 intergenic not near genes chr2L_16_17945001 chr2L_17945001 RAL-177 532 chr2L 17951933 17951978 chr2L 17953420 17953465 hobo 17 1486 3.5 5.0 4.2 3.3 1532 chr2L 17951933 intergenic CR44398 -,CR44397 - chr2L 17952699 intergenic not near genes chr2L 17953465 intergenic not near genes chr2L_17_17950001 chr2L_17950001 RAL-177 533 chr2L 17955849 17955898 chr2L 17955961 17956010 16 112 4.5 0.5 2.5 4.6 161 chr2L 17955849 intergenic not near genes chr2L 17955930 intergenic not near genes chr2L 17956010 intergenic not near genes chr2L_16_17955001 chr2L_17955001 RAL-177 534 chr2L 17958311 17958361 chr2L 17958427 17958467 6 114 4.0 3.0 3.5 1.3 156 chr2L 17958311 intergenic not near genes chr2L 17958389 intergenic not near genes chr2L 17958467 intergenic not near genes chr2L_6_17955001 chr2L_17955001 RAL-177 535 chr2L 18075403 18075437 chr2L 18075638 18075678 5 228 5.5 2.5 4.0 1.0 275 chr2L 18075403 intergenic not near genes chr2L 18075540 intergenic not near genes chr2L 18075678 intergenic not near genes chr2L_5_18075001 chr2L_18075001 RAL-177 536 chr2L 18111221 18111243 chr2L 18111332 18111354 13 109 9.5 4.0 6.8 1.7 133 chr2L 18111221 intergenic not near genes chr2L 18111288 intergenic not near genes chr2L 18111354 intergenic not near genes chr2L_13_18110001 chr2L_18110001 RAL-177 537 chr2L 18220564 18220616 chr2L 18220763 18220815 6 190 1.0 4.0 2.5 1.7 251 chr2L 18220564 intron CG42750 - chr2L 18220690 intron CG42750 - chr2L 18220815 intron CG42750 - chr2L_6_18220001 chr2L_18220001 RAL-177 538 chr2L 18231122 18231165 chr2L 18231227 18231248 9 99 1.0 3.0 2.0 3.0 126 chr2L 18231122 intron CG42750 - chr2L 18231185 intron CG42750 - chr2L 18231248 intron CG42750 - chr2L_9_18230001 chr2L_18230001 RAL-177 539 chr2L 18264045 18264095 chr2L 18264142 18264151 8 92 0.5 3.0 1.8 2.9 106 chr2L 18264045 intron CG42750 - chr2L 18264098 intron CG42750 - chr2L 18264151 intron CG42750 - chr2L_8_18260001 chr2L_18260001 RAL-177 540 chr2L 18408025 18408049 chr2L 18412816 18412853 Doc 8 4800 1.5 6.0 3.8 1.7 4828 chr2L 18408025 intergenic not near genes chr2L 18410439 intergenic not near genes chr2L 18412853 intergenic not near genes chr2L_8_18410001 chr2L_18410001 RAL-177 541 chr2L 18417531 18417548 chr2L 18417649 18417666 5 118 9.0 1.0 5.0 0.8 135 chr2L 18417531 intergenic not near genes chr2L 18417598 intergenic not near genes chr2L 18417666 intergenic not near genes chr2L_5_18415001 chr2L_18415001 RAL-177 542 chr2L 18496687 18496721 chr2L 18496789 18496823 16 100 0.0 8.0 4.0 3.2 136 chr2L 18496687 intron kon - chr2L 18496755 intron kon - chr2L 18496823 intron kon - chr2L_16_18495001 chr2L_18495001 RAL-177 543 chr2L 18538549 18538597 chr2L 18538649 18538697 12 100 0.0 5.5 2.8 3.2 148 chr2L 18538549 intron Pde11 - chr2L 18538623 intron Pde11 - chr2L 18538697 intron Pde11 - chr2L_12_18535001 chr2L_18535001 RAL-177 544 chr2L 18577272 18577298 chr2L 18577453 18577459 7 175 2.0 0.5 1.2 3.2 187 chr2L 18577272 intron Pde11 - chr2L 18577366 intron Pde11 - chr2L 18577459 intron Pde11 - chr2L_7_18575001 chr2L_18575001 RAL-177 545 chr2L 18678366 18678399 chr2L 18678471 18678504 5 105 0.0 1.0 0.5 3.3 138 chr2L 18678366 intron CG31751 + chr2L 18678435 intron CG31751 + chr2L 18678504 intron CG31751 + chr2L_5_18675001 chr2L_18675001 RAL-177 546 chr2L 18745120 18745170 chr2L 18745227 18745277 18 103 1.5 5.0 3.2 4.3 157 chr2L 18745120 intergenic not near genes chr2L 18745198 intergenic not near genes chr2L 18745277 intergenic not near genes chr2L_18_18745001 chr2L_18745001 RAL-177 547 chr2L 18811414 18811435 chr2L 18811516 18811537 7 102 7.5 1.5 4.5 1.3 123 chr2L 18811414 intergenic CG10570 -,CG42502 - chr2L 18811476 intergenic CG10570 -,CG42502 - chr2L 18811537 intergenic not near genes chr2L_7_18810001 chr2L_18810001 RAL-177 548 chr2L 18811650 18811688 chr2L 18811879 18811917 18 222 3.0 4.5 3.8 3.8 267 chr2L 18811650 intergenic not near genes chr2L 18811784 intergenic not near genes chr2L 18811917 intergenic not near genes chr2L_18_18810001 chr2L_18810001 RAL-177 549 chr2L 18812538 18812578 chr2L 18812820 18812856 11 280 4.0 4.0 4.0 2.2 318 chr2L 18812538 intergenic CG17325 +,CG42305 + chr2L 18812697 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812856 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_11_18810001 chr2L_18810001 RAL-177 550 chr2L 18868086 18868128 chr2L 18868179 18868234 6 104 5.5 1.0 3.2 1.4 148 chr2L 18868086 intron tup - chr2L 18868160 intron tup - chr2L 18868234 intron tup - chr2L_6_18865001 chr2L_18865001 RAL-177 551 chr2L 18883836 18883883 chr2L 18883938 18883945 10 94 5.5 3.0 4.2 1.9 109 chr2L 18883836 intergenic not near genes chr2L 18883890 intergenic not near genes chr2L 18883945 intergenic not near genes chr2L_10_18880001 chr2L_18880001 RAL-177 552 chr2L 18898380 18898421 chr2L 18898482 18898523 16 100 3.0 1.0 2.0 5.3 143 chr2L 18898380 intergenic not near genes chr2L 18898452 intergenic not near genes chr2L 18898523 intergenic not near genes chr2L_16_18895001 chr2L_18895001 RAL-177 553 chr2L 18141268 18141268 chr2L 18997150 18997150 4 855882 27.0 19.5 23.2 0.2 855882 chr2L 18141268 intron Socs36E - chr2L 18569209 intron Pde11 - chr2L 18997150 intergenic CG31792 + chr2L_4_18565001 chr2L_18565001 RAL-177 554 chr2L 19147362 19147401 chr2L 19154405 19154456 297 16 7054 3.0 5.0 4.0 3.2 7094 chr2L 19147362 intron brat + chr2L 19150909 intron brat + chr2L 19154456 intron brat + chr2L_16_19150001 chr2L_19150001 RAL-177 555 chr2L 19199652 19199706 chr2L 19199749 19199782 16 89 3.5 3.0 3.2 3.8 130 chr2L 19199652 intron drl + chr2L 19199717 intron drl + chr2L 19199782 intron drl + chr2L_16_19195001 chr2L_19195001 RAL-177 556 chr2L 19226884 19226927 chr2L 19226990 19227017 14 101 2.5 3.0 2.8 3.7 133 chr2L 19226884 intergenic not near genes chr2L 19226950 intergenic not near genes chr2L 19227017 intergenic not near genes chr2L_14_19225001 chr2L_19225001 RAL-177 557 chr2L 19282288 19282329 chr2L 19282418 19282440 10 122 4.5 3.5 4.0 2.0 152 chr2L 19282288 intergenic not near genes chr2L 19282364 intergenic not near genes chr2L 19282440 intergenic not near genes chr2L_10_19280001 chr2L_19280001 RAL-177 558 chr2L 19305585 19305613 chr2L 19305681 19305709 10 96 3.0 6.5 4.8 1.7 124 chr2L 19305585 intergenic not near genes chr2L 19305647 intergenic not near genes chr2L 19305709 intergenic not near genes chr2L_10_19305001 chr2L_19305001 RAL-177 559 chr2L 19331107 19331155 chr2L 19331229 19331277 21 118 3.0 3.5 3.2 5.0 170 chr2L 19331107 intergenic not near genes chr2L 19331192 intergenic not near genes chr2L 19331277 intergenic not near genes chr2L_21_19330001 chr2L_19330001 RAL-177 560 chr2L 19345013 19345043 chr2L 19357222 19357257 blood 12 12224 4.0 5.5 4.8 2.1 12244 chr2L 19345013 intron dnt - chr2L 19351135 intron dnt - chr2L 19357257 intron dnt - chr2L_12_19350001 chr2L_19350001 RAL-177 561 chr2L 19357525 19357567 chr2L 19357635 19357677 17 109 3.5 6.5 5.0 2.8 152 chr2L 19357525 intron dnt - chr2L 19357601 intron dnt - chr2L 19357677 intron dnt - chr2L_17_19355001 chr2L_19355001 RAL-177 562 chr2L 19374482 19374518 chr2L 19374611 19374647 13 129 3.5 7.5 5.5 2.0 165 chr2L 19374482 intergenic not near genes chr2L 19374564 intergenic not near genes chr2L 19374647 intergenic not near genes chr2L_13_19370001 chr2L_19370001 RAL-177 563 chr2L 19380498 19380529 chr2L 19380586 19380629 13 99 3.0 3.0 3.0 3.2 131 chr2L 19380498 intergenic CG17350 + chr2L 19380564 intergenic CG17350 + chr2L 19380629 intergenic CG17350 + chr2L_13_19380001 chr2L_19380001 RAL-177 564 chr2L 19384002 19384013 chr2L 19384097 19384101 4 100 4.0 2.0 3.0 1.0 99 chr2L 19384002 exon fon - chr2L 19384052 exon fon - chr2L 19384101 exon fon - chr2L_4_19380001 chr2L_19380001 RAL-177 565 chr2L 19405597 19405633 chr2L 19405707 19405743 22 110 3.0 1.5 2.2 6.9 146 chr2L 19405597 intron Pax - chr2L 19405670 intron Pax - chr2L 19405743 intron Pax - chr2L_22_19405001 chr2L_19405001 RAL-177 566 chr2L 19437502 19437522 chr2L 19437614 19437634 14 112 10.0 3.0 6.5 1.9 132 chr2L 19437502 intron CG10237 - chr2L 19437568 intron CG10237 - chr2L 19437634 intron CG10237 - chr2L_14_19435001 chr2L_19435001 RAL-177 567 chr2L 19441045 19441089 chr2L 19441142 19441186 14 97 8.5 9.5 9.0 1.4 141 chr2L 19441045 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441186 5` UTR CG10237 - chr2L_14_19440001 chr2L_19440001 RAL-177 568 chr2L 19544590 19544614 chr2L 19544674 19544711 9 89 5.5 7.0 6.2 1.2 121 chr2L 19544590 exon ref(2)P + chr2L 19544650 exon ref(2)P + chr2L 19544711 exon ref(2)P + chr2L_9_19540001 chr2L_19540001 RAL-177 569 chr2L 19620081 19620127 chr2L 19621085 19621136 jockey 12 1003 6.0 5.5 5.8 1.8 1055 chr2L 19620081 intron Lar + chr2L 19620608 intron Lar + chr2L 19621136 intron Lar + chr2L_12_19620001 chr2L_19620001 RAL-177 570 chr2L 19627300 19627324 chr2L 19627408 19627422 7 106 8.5 12.0 10.2 0.6 122 chr2L 19627300 intron Lar + chr2L 19627361 intron Lar + chr2L 19627422 intron Lar + chr2L_7_19625001 chr2L_19625001 RAL-177 571 chr2L 19652553 19652597 chr2L 19674004 19674053 opus 12 21455 7.0 6.0 6.5 1.6 21500 chr2L 19652553 intron Lar + chr2L 19663303 intron Lar + chr2L 19674053 intron Lar + chr2L_12_19660001 chr2L_19660001 RAL-177 572 chr2L 19703530 19703565 chr2L 19712686 19712721 roo 14 9153 9.5 10.0 9.8 1.3 9191 chr2L 19703530 intron Lar + chr2L 19708126 intron Lar + chr2L 19712721 intron Lar + chr2L_14_19705001 chr2L_19705001 RAL-177 573 chr2L 19737351 19737371 chr2L 19740826 19740837 1360 6 3473 5.0 4.5 4.8 1.0 3486 chr2L 19737351 intergenic Nf-YB + chr2L 19739094 intergenic not near genes chr2L 19740837 intergenic not near genes chr2L_6_19735001 chr2L_19735001 RAL-177 574 chr2L 19737378 19737389 chr2L 19740825 19740848 1360 7 3473 3.5 4.5 4.0 1.4 3470 chr2L 19737378 intergenic Nf-YB + chr2L 19739113 intergenic not near genes chr2L 19740848 intergenic not near genes chr2L_7_19735001 chr2L_19735001 RAL-177 575 chr2L 19762788 19762839 chr2L 19763050 19763101 pogo 21 262 2.0 4.0 3.0 5.2 313 chr2L 19762788 exon fbp - chr2L 19762944 intron fbp - chr2L 19763101 intron fbp - chr2L_21_19760001 chr2L_19760001 RAL-177 576 chr2L 19773146 19773190 chr2L 19773253 19773297 16 107 7.0 4.5 5.8 2.4 151 chr2L 19773146 intergenic not near genes chr2L 19773222 intergenic not near genes chr2L 19773297 intergenic not near genes chr2L_16_19770001 chr2L_19770001 RAL-177 577 chr2L 19776640 19776652 chr2L 19776740 19776752 6 100 13.0 5.5 9.2 0.6 112 chr2L 19776640 3` UTR CdGAPr - chr2L 19776696 3` UTR CdGAPr - chr2L 19776752 3` UTR CdGAPr - chr2L_6_19775001 chr2L_19775001 RAL-177 578 chr2L 19824415 19824434 chr2L 19824518 19824537 7 103 1.0 5.0 3.0 1.8 122 chr2L 19824415 intron sick + chr2L 19824476 intron sick + chr2L 19824537 intron sick + chr2L_7_19820001 chr2L_19820001 RAL-177 579 chr2L 19837256 19837299 chr2L 19837356 19837395 14 96 4.5 1.5 3.0 3.5 139 chr2L 19837256 intron sick + chr2L 19837326 intron sick + chr2L 19837395 intron sick + chr2L_14_19835001 chr2L_19835001 RAL-177 580 chr2L 19846235 19846275 chr2L 19846336 19846376 13 101 0.5 8.0 4.2 2.5 141 chr2L 19846235 intron sick + chr2L 19846306 intron sick + chr2L 19846376 intron sick + chr2L_13_19845001 chr2L_19845001 RAL-177 581 chr2L 19901468 19901517 chr2L 19901591 19901640 13 121 3.5 1.0 2.2 4.1 172 chr2L 19901468 intron sick + chr2L 19901554 intron sick + chr2L 19901640 intron sick + chr2L_13_19900001 chr2L_19900001 RAL-177 582 chr2L 19911271 19911315 chr2L 19911379 19911423 18 106 4.0 1.5 2.8 4.7 152 chr2L 19911271 intron,3` UTR sick +,CR43097 - chr2L 19911347 intron,3` UTR sick +,CR43097 - chr2L 19911423 intron,3` UTR sick +,CR43097 - chr2L_18_19910001 chr2L_19910001 RAL-177 583 chr2L 19935231 19935248 chr2L 19935328 19935339 7 93 6.5 4.5 5.5 1.1 108 chr2L 19935231 intron sick + chr2L 19935285 intron sick + chr2L 19935339 intron sick + chr2L_7_19935001 chr2L_19935001 RAL-177 584 chr2L 19977458 19977499 chr2L 19983165 19983206 7 5708 38.0 21.0 29.5 0.2 5748 chr2L 19977458 intron CG43861 - chr2L 19980332 intron CG43861 - chr2L 19983206 intron CG43861 - chr2L_7_19980001 chr2L_19980001 RAL-177 585 chr2L 20005855 20005903 chr2L 20010951 20010999 flea 15 5094 3.5 5.0 4.2 2.9 5144 chr2L 20005855 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20010999 intron CG43861 - chr2L_15_20005001 chr2L_20005001 RAL-177 586 chr2L 20011726 20011762 chr2L 20011829 20011865 13 103 0.0 7.0 3.5 2.9 139 chr2L 20011726 intron CG43861 - chr2L 20011796 intron CG43861 - chr2L 20011865 intron CG43861 - chr2L_13_20010001 chr2L_20010001 RAL-177 587 chr2L 20022069 20022124 chr2L 20022202 20022256 14 132 1.0 3.5 2.2 4.4 187 chr2L 20022069 intergenic not near genes chr2L 20022162 intergenic not near genes chr2L 20022256 intergenic not near genes chr2L_14_20020001 chr2L_20020001 RAL-177 588 chr2L 20057034 20057044 chr2L 20057131 20057141 5 97 7.5 3.5 5.5 0.8 107 chr2L 20057034 intergenic not near genes chr2L 20057088 intergenic not near genes chr2L 20057141 intergenic not near genes chr2L_5_20055001 chr2L_20055001 RAL-177 589 chr2L 20057048 20057078 chr2L 20057127 20057175 4 92 3.5 3.0 3.2 1.0 127 chr2L 20057048 intergenic not near genes chr2L 20057112 intergenic not near genes chr2L 20057175 intergenic not near genes chr2L_4_20055001 chr2L_20055001 RAL-177 590 chr2L 20122617 20122649 chr2L 20122727 20122760 6 110 4.0 4.0 4.0 1.2 143 chr2L 20122617 intergenic not near genes chr2L 20122688 intergenic not near genes chr2L 20122760 intergenic not near genes chr2L_6_20120001 chr2L_20120001 RAL-177 591 chr2L 20272106 20272116 chr2L 20282826 20282847 copia 5 10726 10.0 8.0 9.0 0.5 10741 chr2L 20272106 intergenic not near genes chr2L 20277476 intergenic not near genes chr2L 20282847 intergenic not near genes chr2L_5_20275001 chr2L_20275001 RAL-177 592 chr2L 20272118 20272144 chr2L 20282823 20282845 copia 17 10728 6.5 8.0 7.2 2.1 10727 chr2L 20272118 intergenic not near genes chr2L 20277482 intergenic not near genes chr2L 20282845 intergenic not near genes chr2L_17_20275001 chr2L_20275001 RAL-177 593 chr2L 20296500 20296534 chr2L 20296601 20296635 9 101 4.0 5.5 4.8 1.6 135 chr2L 20296500 intergenic CR43414 - chr2L 20296568 intergenic CR43414 - chr2L 20296635 intergenic CR43414 - chr2L_9_20295001 chr2L_20295001 RAL-177 594 chr2L 20299398 20299418 chr2L 20299536 20299549 6 136 0.0 1.5 0.8 3.3 151 chr2L 20299398 intergenic not near genes chr2L 20299474 intergenic not near genes chr2L 20299549 intergenic not near genes chr2L_6_20295001 chr2L_20295001 RAL-177 595 chr2L 20303164 20303190 chr2L 20310652 20310666 blood 10 7487 1.5 6.0 3.8 2.1 7502 chr2L 20303164 intergenic not near genes chr2L 20306915 intergenic not near genes chr2L 20310666 intergenic not near genes chr2L_10_20305001 chr2L_20305001 RAL-177 596 chr2L 20336055 20336100 chr2L 20336160 20336205 18 105 3.0 2.5 2.8 4.7 150 chr2L 20336055 intron spir + chr2L 20336130 intron spir + chr2L 20336205 intron spir + chr2L_18_20335001 chr2L_20335001 RAL-177 597 chr2L 20420097 20420146 chr2L 20420194 20420243 16 92 6.0 4.5 5.2 2.6 146 chr2L 20420097 intron Arpc2 + chr2L 20420170 intron Arpc2 + chr2L 20420243 intron Arpc2 + chr2L_16_20420001 chr2L_20420001 RAL-177 598 chr2L 20429678 20429704 chr2L 20429792 20429798 4 108 4.5 5.0 4.8 0.7 120 chr2L 20429678 intron CG31688 + chr2L 20429738 intron CG31688 + chr2L 20429798 intron CG31688 + chr2L_4_20425001 chr2L_20425001 RAL-177 599 chr2L 20480537 20480544 chr2L 20480680 20480687 4 143 4.0 7.0 5.5 0.6 150 chr2L 20480537 intron CR44980 - chr2L 20480612 intron CR44980 - chr2L 20480687 intron CR44980 - chr2L_4_20480001 chr2L_20480001 RAL-177 600 chr2L 20498671 20498704 chr2L 20498790 20498823 13 118 4.5 6.0 5.2 2.1 152 chr2L 20498671 intergenic not near genes chr2L 20498747 intergenic not near genes chr2L 20498823 intergenic not near genes chr2L_13_20495001 chr2L_20495001 RAL-177 601 chr2L 20513581 20513606 chr2L 20513693 20513718 4 112 2.0 3.0 2.5 1.1 137 chr2L 20513581 intergenic CR45702 + chr2L 20513650 intergenic CR45702 + chr2L 20513718 intergenic CR45702 + chr2L_4_20510001 chr2L_20510001 RAL-177 602 chr2L 20530752 20530788 chr2L 20530911 20530947 6 158 4.5 4.5 4.5 1.1 195 chr2L 20530752 intergenic CG44270 + chr2L 20530850 intergenic CG44270 + chr2L 20530947 intergenic CG44270 + chr2L_6_20530001 chr2L_20530001 RAL-177 603 chr2L 20568648 20568684 chr2L 20569058 20569094 X-element 19 409 4.0 5.0 4.5 3.5 446 chr2L 20568648 intron CR45347 + chr2L 20568871 intron CR45347 + chr2L 20569094 intron CR45347 + chr2L_19_20565001 chr2L_20565001 RAL-177 604 chr2L 20601765 20601814 chr2L 20601863 20601911 12 98 4.5 5.0 4.8 2.1 146 chr2L 20601765 intron CR44909 - chr2L 20601838 intron CR44909 - chr2L 20601911 intron CR44909 - chr2L_12_20600001 chr2L_20600001 RAL-177 605 chr2L 20602710 20602744 chr2L 20602818 20602852 9 108 0.5 3.5 2.0 3.0 142 chr2L 20602710 intron CR44909 - chr2L 20602781 intron CR44909 - chr2L 20602852 intron CR44909 - chr2L_9_20600001 chr2L_20600001 RAL-177 606 chr2L 20611238 20611266 chr2L 20611324 20611359 10 103 0.0 5.0 2.5 2.9 121 chr2L 20611238 intron CR44909 - chr2L 20611298 intron CR44909 - chr2L 20611359 intron CR44909 - chr2L_10_20610001 chr2L_20610001 RAL-177 607 chr2L 20639482 20639532 chr2L 20639778 20639828 INE-1 10 294 3.0 8.5 5.8 1.5 346 chr2L 20639482 intergenic not near genes chr2L 20639655 intergenic CG31680 + chr2L 20639828 intergenic CG31680 + chr2L_10_20635001 chr2L_20635001 RAL-177 608 chr2L 20643323 20643339 chr2L 20643475 20643491 9 151 5.5 7.0 6.2 1.2 168 chr2L 20643323 intergenic phr6-4 -,CG17470 - chr2L 20643407 3` UTR phr6-4 - chr2L 20643491 3` UTR phr6-4 - chr2L_9_20640001 chr2L_20640001 RAL-177 609 chr2L 20668674 20668720 chr2L 20668769 20668788 20 94 8.5 6.5 7.5 2.4 114 chr2L 20668674 intron CG31678 - chr2L 20668731 intron CG31678 - chr2L 20668788 intron CG31678 - chr2L_20_20665001 chr2L_20665001 RAL-177 610 chr2L 20674813 20674860 chr2L 20674918 20674958 6 98 6.0 0.0 3.0 1.5 145 chr2L 20674813 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674958 intron CG31678 - chr2L_6_20670001 chr2L_20670001 RAL-177 611 chr2L 20695778 20695828 chr2L 20695886 20695936 25 107 5.0 3.0 4.0 5.0 158 chr2L 20695778 intron Hr38 - chr2L 20695857 intron Hr38 - chr2L 20695936 intron Hr38 - chr2L_25_20695001 chr2L_20695001 RAL-177 612 chr2L 20801643 20801691 chr2L 20801738 20801770 9 93 4.0 0.0 2.0 3.0 127 chr2L 20801643 intron CG9328 + chr2L 20801706 intron CG9328 + chr2L 20801770 intron CG9328 + chr2L_9_20800001 chr2L_20800001 RAL-177 613 chr2L 20826501 20826544 chr2L 20826601 20826644 21 100 6.5 5.0 5.8 3.1 143 chr2L 20826501 intron CG9331 + chr2L 20826572 intron CG9331 + chr2L 20826644 exon CG9331 + chr2L_21_20825001 chr2L_20825001 RAL-177 614 chr2L 20835788 20835840 chr2L 20836525 20836577 Quasimodo 18 735 6.0 2.0 4.0 3.6 789 chr2L 20835788 5` UTR Oseg5 - chr2L 20836182 intergenic Oseg5 -,Spn38F - chr2L 20836577 intergenic Spn38F - chr2L_18_20835001 chr2L_20835001 RAL-177 615 chr2L 20840020 20840058 chr2L 20840237 20840290 16 231 4.0 2.0 3.0 4.0 270 chr2L 20840020 intergenic not near genes chr2L 20840155 intergenic not near genes chr2L 20840290 intergenic CG31676 + chr2L_16_20840001 chr2L_20840001 RAL-177 616 chr2L 20846744 20846789 chr2L 20846848 20846868 13 102 3.5 2.0 2.8 3.4 124 chr2L 20846744 intron CG31676 + chr2L 20846806 intron CG31676 + chr2L 20846868 intron CG31676 + chr2L_13_20845001 chr2L_20845001 RAL-177 617 chr2L 20862581 20862590 chr2L 20862698 20862707 5 117 0.0 9.0 4.5 0.9 126 chr2L 20862581 intergenic not near genes chr2L 20862644 intergenic not near genes chr2L 20862707 intergenic not near genes chr2L_5_20860001 chr2L_20860001 RAL-177 618 chr2L 20901478 20901482 chr2L 20902643 20902666 1360 4 1179 4.0 6.5 5.2 0.6 1188 chr2L 20901478 intron,intron CG43739 -,sky - chr2L 20902072 intron,intron CG43739 -,sky - chr2L 20902666 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-177 619 chr2L 20911008 20911060 chr2L 20911103 20911156 12 96 0.5 3.5 2.0 4.0 148 chr2L 20911008 intron,intron CG43739 -,sky - chr2L 20911082 intron,intron CG43739 -,sky - chr2L 20911156 intron,intron CG43739 -,sky - chr2L_12_20910001 chr2L_20910001 RAL-177 620 chr2L 20946925 20946962 chr2L 20947032 20947069 10 107 4.5 5.5 5.0 1.7 144 chr2L 20946925 intergenic CR44606 - chr2L 20946997 intergenic CR44606 - chr2L 20947069 intergenic CR44606 - chr2L_10_20945001 chr2L_20945001 RAL-177 621 chr2L 20967064 20967105 chr2L 20967170 20967211 13 105 4.0 4.5 4.2 2.5 147 chr2L 20967064 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967211 3` UTR CG42238 - chr2L_13_20965001 chr2L_20965001 RAL-177 622 chr2L 20976634 20976671 chr2L 20981469 20981495 X-element 7 4828 4.5 5.0 4.8 1.2 4861 chr2L 20976634 intron CG42238 - chr2L 20979064 intron CG42238 - chr2L 20981495 intron CG42238 - chr2L_7_20975001 chr2L_20975001 RAL-177 623 chr2L 20991018 20991047 chr2L 20991115 20991145 9 97 7.0 4.0 5.5 1.4 127 chr2L 20991018 intron CG42238 - chr2L 20991082 intron CG42238 - chr2L 20991145 intron CG42238 - chr2L_9_20990001 chr2L_20990001 RAL-177 624 chr2L 21020256 21020268 chr2L 21023953 21023965 NOF 6 3697 10.5 3.0 6.8 0.8 3709 chr2L 21020256 intron CG42238 - chr2L 21022110 intron CG42238 - chr2L 21023965 intron CG42238 - chr2L_6_21020001 chr2L_21020001 RAL-177 625 chr2L 21041119 21041161 chr2L 21049400 21049421 Tirant 10 8274 1.5 3.0 2.2 3.1 8302 chr2L 21041119 intron CG42238 - chr2L 21045270 intron CG42238 - chr2L 21049421 intron CG42238 - chr2L_10_21045001 chr2L_21045001 RAL-177 626 chr2L 21074911 21074952 chr2L 21075013 21075063 19 110 6.5 3.0 4.8 3.3 152 chr2L 21074911 intergenic tadr + chr2L 21074987 intergenic tadr + chr2L 21075063 intergenic tadr + chr2L_19_21070001 chr2L_21070001 RAL-177 627 chr2L 21086419 21086454 chr2L 21086549 21086574 8 127 3.5 4.5 4.0 1.6 155 chr2L 21086419 5` UTR CG33509 - chr2L 21086496 5` UTR CG33509 - chr2L 21086574 intergenic CG33509 -,ppk13 - chr2L_8_21085001 chr2L_21085001 RAL-177 628 chr2L 21088900 21088941 chr2L 21089003 21089044 14 103 6.0 10.5 8.2 1.5 144 chr2L 21088900 intergenic ppk13 -,CG9259 + chr2L 21088972 intergenic ppk13 -,CG9259 + chr2L 21089044 intergenic ppk13 -,CG9259 + chr2L_14_21085001 chr2L_21085001 RAL-177 629 chr2L 21158859 21158903 chr2L 21158956 21158973 13 93 7.0 5.0 6.0 1.9 114 chr2L 21158859 intergenic CG9248 +,CG9249 - chr2L 21158916 5` UTR CG9248 + chr2L 21158973 5` UTR CG9248 + chr2L_13_21155001 chr2L_21155001 RAL-177 630 chr2L 21245264 21245304 chr2L 21245517 21245560 14 250 0.0 4.0 2.0 4.7 296 chr2L 21245264 intron Hr39 + chr2L 21245412 intron Hr39 + chr2L 21245560 intron Hr39 + chr2L_14_21245001 chr2L_21245001 RAL-177 631 chr2L 21286588 21286626 chr2L 21286681 21286724 17 98 6.5 4.5 5.5 2.6 136 chr2L 21286588 exon Mio - chr2L 21286656 intron Mio - chr2L 21286724 intron Mio - chr2L_17_21285001 chr2L_21285001 RAL-177 632 chr2L 21347532 21347572 chr2L 21355024 21355064 blood 13 7488 11.5 6.5 9.0 1.3 7532 chr2L 21347532 intron Tsp39D + chr2L 21351298 intron Tsp39D + chr2L 21355064 intron Tsp39D + chr2L_13_21350001 chr2L_21350001 RAL-177 633 chr2L 21355592 21355635 chr2L 21355757 21355783 16 160 4.5 4.5 4.5 2.9 191 chr2L 21355592 exon Tsp39D + chr2L 21355688 intron Tsp39D + chr2L 21355783 intron Tsp39D + chr2L_16_21355001 chr2L_21355001 RAL-177 634 chr2L 21392192 21392243 chr2L 21392298 21392300 11 95 2.5 1.0 1.8 3.9 108 chr2L 21392192 3` UTR nrv3 + chr2L 21392246 3` UTR nrv3 + chr2L 21392300 3` UTR nrv3 + chr2L_11_21390001 chr2L_21390001 RAL-177 635 chr2L 21597025 21597059 chr2L 21604789 21604823 roo 5 7764 4.0 5.0 4.5 0.9 7798 chr2L 21597025 intergenic not near genes chr2L 21600924 intergenic not near genes chr2L 21604823 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-177 636 chr2L 21691817 21691858 chr2L 21698307 21698328 Burdock 14 6485 6.0 2.0 4.0 2.8 6511 chr2L 21691817 intron CG31619 + chr2L 21695072 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_14_21695001 chr2L_21695001 RAL-177 637 chr2L 21750082 21750133 chr2L 21750422 21750476 9 341 1.0 3.0 2.0 3.0 394 chr2L 21750082 intron step - chr2L 21750279 intron step - chr2L 21750476 intron step - chr2L_9_21750001 chr2L_21750001 RAL-177 638 chr2L 21788720 21788767 chr2L 21788818 21788865 14 97 5.5 8.0 6.8 1.8 145 chr2L 21788720 intron CG31612 - chr2L 21788792 intron CG31612 - chr2L 21788865 intron CG31612 - chr2L_14_21785001 chr2L_21785001 RAL-177 639 chr2L 21981682 21981711 chr2L 21990856 21990896 roo 8 9181 5.5 3.5 4.5 1.5 9214 chr2L 21981682 exon CG2528 - chr2L 21986289 intron CG2528 - chr2L 21990896 exon CG2528 - chr2L_8_21985001 chr2L_21985001 RAL-177 640 chr2L 22047233 22047256 chr2L 22047378 22047401 5 143 3.5 4.0 3.8 1.0 168 chr2L 22047233 intergenic not near genes chr2L 22047317 intergenic not near genes chr2L 22047401 intergenic not near genes chr2L_5_22045001 chr2L_22045001 RAL-177 641 chr2L 22192005 22192008 chr2L 22192114 22192117 5 108 9.5 3.5 6.5 0.7 112 chr2L 22192005 intron Ir40a - chr2L 22192061 intron Ir40a - chr2L 22192117 intron Ir40a - chr2L_5_22190001 chr2L_22190001 RAL-177 642 chr2L 22192015 22192054 chr2L 22192113 22192162 11 105 3.5 3.5 3.5 2.4 147 chr2L 22192015 intron Ir40a - chr2L 22192088 intron Ir40a - chr2L 22192162 intron Ir40a - chr2L_11_22190001 chr2L_22190001 RAL-177 643 chr2L 22197885 22197896 chr2L 22198104 22198115 4 219 6.5 5.0 5.8 0.6 230 chr2L 22197885 intron Ir40a - chr2L 22198000 intron Ir40a - chr2L 22198115 intron Ir40a - chr2L_4_22195001 chr2L_22195001 RAL-177 644 chr2L 22212120 22212163 chr2L 22212687 22212730 17 566 3.0 3.0 3.0 4.2 610 chr2L 22212120 intron Ir40a - chr2L 22212425 intron Ir40a - chr2L 22212730 exon Ir40a - chr2L_17_22210001 chr2L_22210001 RAL-177 645 chr2L 22215889 22215933 chr2L 22215995 22216039 11 106 2.5 7.0 4.8 1.9 150 chr2L 22215889 intergenic not near genes chr2L 22215964 intergenic not near genes chr2L 22216039 intergenic not near genes chr2L_11_22215001 chr2L_22215001 RAL-177 646 chr2L 22239431 22239461 chr2L 22239522 22239525 5 84 2.5 3.5 3.0 1.2 94 chr2L 22239431 3` UTR CR43765 - chr2L 22239478 3` UTR CR43765 - chr2L 22239525 3` UTR CR43765 - chr2L_5_22235001 chr2L_22235001 RAL-177 647 chr2L 22258601 22258646 chr2L 22260745 22260790 G6 21 2144 5.0 4.5 4.8 3.6 2189 chr2L 22258601 intergenic Tif-IA + chr2L 22259696 intergenic not near genes chr2L 22260790 intergenic not near genes chr2L_21_22255001 chr2L_22255001 RAL-177 648 chr2L 22294336 22294382 chr2L 22294444 22294490 13 107 2.0 2.5 2.2 4.1 154 chr2L 22294336 intergenic not near genes chr2L 22294413 intergenic not near genes chr2L 22294490 intergenic not near genes chr2L_13_22290001 chr2L_22290001 RAL-177 649 chr2L 22558373 22558388 chr2L 22558704 22558719 6 331 7.0 5.5 6.2 0.8 346 chr2L 22558373 intergenic not near genes chr2L 22558546 intergenic not near genes chr2L 22558719 intergenic not near genes chr2L_6_22555001 chr2L_22555001 RAL-177 650 chr2L 22558394 22558423 chr2L 22558702 22558744 12 327 2.0 5.0 3.5 2.7 350 chr2L 22558394 intergenic not near genes chr2L 22558569 intergenic not near genes chr2L 22558744 intergenic not near genes chr2L_12_22555001 chr2L_22555001 RAL-177 651 chr2L 22581954 22581984 chr2L 22583763 22583793 S-element 12 1808 6.5 1.0 3.8 2.5 1839 chr2L 22581954 intron CG17494 + chr2L 22582874 intron CG17494 + chr2L 22583793 intron CG17494 + chr2L_12_22580001 chr2L_22580001 RAL-177 652 chr2L 22716428 22716448 chr2L 22717849 22717869 INE-1 4 1421 4.5 3.0 3.8 0.8 1441 chr2L 22716428 intron CG40006 - chr2L 22717148 intron CG40006 - chr2L 22717869 intron CG40006 - chr2L_4_22715001 chr2L_22715001 RAL-177 653 chr2L 22716451 22716480 chr2L 22717848 22717868 INE-1 9 1414 2.0 2.5 2.2 2.8 1417 chr2L 22716451 intron CG40006 - chr2L 22717160 intron CG40006 - chr2L 22717868 intron CG40006 - chr2L_9_22715001 chr2L_22715001 RAL-177 654 chr2L 22776400 22776438 chr2L 22778209 22778247 S-element 9 1809 5.5 5.0 5.2 1.5 1847 chr2L 22776400 intergenic not near genes chr2L 22777324 intergenic not near genes chr2L 22778247 intergenic not near genes chr2L_9_22775001 chr2L_22775001 RAL-177 655 chr2L 22985609 22985648 chr2L 22985725 22985775 12 124 2.5 5.0 3.8 2.5 166 chr2L 22985609 intron cta + chr2L 22985692 intron cta + chr2L 22985775 intron cta + chr2L_12_22985001 chr2L_22985001 RAL-177 656 chr2L 23233924 23233929 chr2L 23234023 23234028 4 99 15.0 10.5 12.8 0.3 104 chr2L 23233924 intergenic not near genes chr2L 23233976 intergenic not near genes chr2L 23234028 intergenic not near genes chr2L_4_23230001 chr2L_23230001 RAL-177 657 chr2R 469947 469976 chr2R 473208 473231 F-element 8 3257 4.5 9.0 6.8 1.0 3284 chr2R 469947 intergenic not near genes chr2R 471589 intergenic not near genes chr2R 473231 intergenic not near genes chr2R_8_470001 chr2R_470001 RAL-177 658 chr2R 528648 528671 chr2R 528744 528783 13 105 2.5 2.5 2.5 3.7 135 chr2R 528648 intron CG40378 + chr2R 528716 intron CG40378 + chr2R 528783 intron CG40378 + chr2R_13_525001 chr2R_525001 RAL-177 659 chr2R 529327 529346 chr2R 537961 537991 Max-element 5 8643 2.0 2.5 2.2 1.6 8664 chr2R 529327 intron CG40378 + chr2R 533659 intron CG40378 + chr2R 537991 intron CG40378 + chr2R_5_530001 chr2R_530001 RAL-177 660 chr2R 552749 552787 chr2R 553981 554004 1360 8 1232 2.5 3.0 2.8 2.1 1255 chr2R 552749 intron CG40378 + chr2R 553376 intron CG40378 + chr2R 554004 intron CG40378 + chr2R_8_550001 chr2R_550001 RAL-177 661 chr2R 699108 699114 chr2R 705339 705350 297 4 6235 11.0 5.5 8.2 0.4 6242 chr2R 699108 intron CG43676 + chr2R 702229 intron CG43676 + chr2R 705350 intron CG43676 + chr2R_4_700001 chr2R_700001 RAL-177 662 chr2R 952436 952454 chr2R 952562 952597 4 137 5.5 3.5 4.5 0.7 161 chr2R 952436 intergenic not near genes chr2R 952516 intergenic not near genes chr2R 952597 intergenic not near genes chr2R_4_950001 chr2R_950001 RAL-177 663 chr2R 1320201 1320201 chr2R 11463556 11463556 invader1 5 10143355 38.0 14.0 26.0 0.2 10143355 chr2R 1320201 intergenic not near genes chr2R 6391878 intergenic not near genes chr2R 11463556 3` UTR E(Pc) + chr2R_5_6390001 chr2R_6390001 RAL-177 664 chr2R 1340582 1340592 chr2R 1340866 1340876 4 284 11.5 8.5 10.0 0.4 294 chr2R 1340582 intergenic not near genes chr2R 1340729 intergenic not near genes chr2R 1340876 intergenic not near genes chr2R_4_1340001 chr2R_1340001 RAL-177 665 chr2R 1516585 1516603 chr2R 1521333 1521350 1731 8 4748 12.5 4.5 8.5 0.8 4765 chr2R 1516585 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521350 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-177 666 chr2R 2015126 2015164 chr2R 2015223 2015251 9 95 1.5 2.5 2.0 3.0 125 chr2R 2015126 intron CG17684 - chr2R 2015188 intron CG17684 - chr2R 2015251 intron CG17684 - chr2R_9_2015001 chr2R_2015001 RAL-177 667 chr2R 2110489 2110500 chr2R 2118067 2118078 17.6 6 7577 7.0 5.0 6.0 0.9 7589 chr2R 2110489 intron CG17684 - chr2R 2114284 intron CG17684 - chr2R 2118078 intron CG17684 - chr2R_6_2110001 chr2R_2110001 RAL-177 668 chr2R 2498972 2499005 chr2R 2508139 2508172 roo 4 9167 4.0 3.0 3.5 0.9 9200 chr2R 2498972 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508172 intron MFS17 - chr2R_4_2500001 chr2R_2500001 RAL-177 669 chr2R 2508293 2508336 chr2R 2508451 2508494 9 158 2.5 2.0 2.2 2.8 201 chr2R 2508293 intron MFS17 - chr2R 2508394 intron MFS17 - chr2R 2508494 intron MFS17 - chr2R_9_2505001 chr2R_2505001 RAL-177 670 chr2R 2875378 2875394 chr2R 2878912 2878929 HMS-Beagle 5 3535 36.5 24.5 30.5 0.2 3551 chr2R 2875378 intergenic not near genes chr2R 2877154 intergenic not near genes chr2R 2878929 intergenic not near genes chr2R_5_2875001 chr2R_2875001 RAL-177 671 chr2R 3293728 3293759 chr2R 3293824 3293846 4 94 3.0 4.0 3.5 0.9 118 chr2R 3293728 intergenic not near genes chr2R 3293787 intergenic not near genes chr2R 3293846 intergenic not near genes chr2R_4_3290001 chr2R_3290001 RAL-177 672 chr2R 3532601 3532638 chr2R 3536063 3536101 Doc 11 3463 5.5 3.0 4.2 2.1 3500 chr2R 3532601 intergenic not near genes chr2R 3534351 intergenic not near genes chr2R 3536101 intergenic not near genes chr2R_11_3530001 chr2R_3530001 RAL-177 673 chr2R 4312943 4312984 chr2R 4313047 4313088 19 104 2.0 5.0 3.5 4.2 145 chr2R 4312943 intergenic not near genes chr2R 4313016 intergenic not near genes chr2R 4313088 intergenic not near genes chr2R_19_4310001 chr2R_4310001 RAL-177 674 chr2R 4602827 4602874 chr2R 4603202 4603249 9 365 2.5 6.0 4.2 1.7 422 chr2R 4602827 intron p120ctn + chr2R 4603038 intron p120ctn + chr2R 4603249 intron p120ctn + chr2R_9_4600001 chr2R_4600001 RAL-177 675 chr2R 4624626 4624672 chr2R 4626551 4626597 Bica 9 1924 0.0 3.0 1.5 3.6 1971 chr2R 4624626 intergenic not near genes chr2R 4625612 intergenic not near genes chr2R 4626597 intergenic not near genes chr2R_9_4625001 chr2R_4625001 RAL-177 676 chr2R 4634153 4634183 chr2R 4634252 4634282 7 98 6.5 4.0 5.2 1.1 129 chr2R 4634153 intergenic not near genes chr2R 4634218 intergenic not near genes chr2R 4634282 intergenic not near genes chr2R_7_4630001 chr2R_4630001 RAL-177 677 chr2R 4702485 4702497 chr2R 4702643 4702655 4 158 1.5 6.0 3.8 0.8 170 chr2R 4702485 intron Nipped-B - chr2R 4702570 intron Nipped-B - chr2R 4702655 intron Nipped-B - chr2R_4_4700001 chr2R_4700001 RAL-177 678 chr2R 4750320 4750376 chr2R 4751497 4751516 1360 13 1168 6.0 4.0 5.0 2.2 1196 chr2R 4750320 intron conu + chr2R 4750918 intron conu + chr2R 4751516 intron conu + chr2R_13_4750001 chr2R_4750001 RAL-177 679 chr2R 4870726 4870736 chr2R 4871257 4871267 R1A1-element 4 531 1.0 4.0 2.5 1.1 541 chr2R 4870726 intergenic not near genes chr2R 4870996 intergenic not near genes chr2R 4871267 intergenic not near genes chr2R_4_4870001 chr2R_4870001 RAL-177 680 chr2R 4878667 4878698 chr2R 4887673 4887704 X-element 10 9004 3.0 2.5 2.8 2.6 9037 chr2R 4878667 intergenic not near genes chr2R 4883186 intergenic not near genes chr2R 4887704 intergenic not near genes chr2R_10_4880001 chr2R_4880001 RAL-177 681 chr2R 4940943 4940973 chr2R 4943413 4943424 7 2467 16.5 20.0 18.2 0.4 2481 chr2R 4940943 intron Ir41a + chr2R 4942184 intron Ir41a + chr2R 4943424 intron Ir41a + chr2R_7_4940001 chr2R_4940001 RAL-177 682 chr2R 4970246 4970274 chr2R 4970341 4970370 5 94 3.5 6.5 5.0 0.8 124 chr2R 4970246 intron Ir41a + chr2R 4970308 intron Ir41a + chr2R 4970370 intron Ir41a + chr2R_5_4970001 chr2R_4970001 RAL-177 683 chr2R 5009171 5009202 chr2R 5009267 5009299 10 94 3.0 6.5 4.8 1.7 128 chr2R 5009171 intron Ir41a + chr2R 5009235 intron Ir41a + chr2R 5009299 intron Ir41a + chr2R_10_5005001 chr2R_5005001 RAL-177 684 chr2R 5019261 5019311 chr2R 5019367 5019416 16 104 2.5 6.5 4.5 2.9 155 chr2R 5019261 intron Ir41a + chr2R 5019338 intron Ir41a + chr2R 5019416 intron Ir41a + chr2R_16_5015001 chr2R_5015001 RAL-177 685 chr2R 5075205 5075225 chr2R 5075353 5075373 4 148 9.0 0.0 4.5 0.7 168 chr2R 5075205 intergenic not near genes chr2R 5075289 intergenic not near genes chr2R 5075373 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-177 686 chr2R 5075355 5075372 chr2R 5075767 5075808 6 429 0.0 4.5 2.2 1.9 453 chr2R 5075355 intergenic not near genes chr2R 5075582 intergenic not near genes chr2R 5075808 intergenic not near genes chr2R_6_5075001 chr2R_5075001 RAL-177 687 chr2R 5144909 5144924 chr2R 5145005 5145020 5 96 4.5 2.0 3.2 1.2 111 chr2R 5144909 intron Atf6 + chr2R 5144964 intron Atf6 + chr2R 5145020 intron Atf6 + chr2R_5_5140001 chr2R_5140001 RAL-177 688 chr2R 5237335 5237371 chr2R 5237437 5237472 8 96 2.5 1.0 1.8 2.9 137 chr2R 5237335 intron Nipped-A - chr2R 5237404 intron Nipped-A - chr2R 5237472 intron Nipped-A - chr2R_8_5235001 chr2R_5235001 RAL-177 689 chr2R 5240212 5240236 chr2R 5240308 5240322 7 95 3.5 4.5 4.0 1.4 110 chr2R 5240212 intron Nipped-A - chr2R 5240267 intron Nipped-A - chr2R 5240322 intron Nipped-A - chr2R_7_5240001 chr2R_5240001 RAL-177 690 chr2R 5303471 5303518 chr2R 5303579 5303626 11 105 1.0 2.5 1.8 3.9 155 chr2R 5303471 intergenic not near genes chr2R 5303548 intergenic not near genes chr2R 5303626 intergenic not near genes chr2R_11_5300001 chr2R_5300001 RAL-177 691 chr2R 5417974 5418027 chr2R 5420626 5420679 Burdock 10 2652 4.5 4.5 4.5 1.8 2705 chr2R 5417974 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_10_5415001 chr2R_5415001 RAL-177 692 chr2R 5472347 5472389 chr2R 5472462 5472492 8 105 1.0 4.5 2.8 2.1 145 chr2R 5472347 intron CG30440 - chr2R 5472420 intron CG30440 - chr2R 5472492 intron CG30440 - chr2R_8_5470001 chr2R_5470001 RAL-177 693 chr2R 5509504 5509549 chr2R 5509620 5509665 11 115 4.0 3.5 3.8 2.3 161 chr2R 5509504 intron CG30438 + chr2R 5509584 intron CG30438 + chr2R 5509665 intron CG30438 + chr2R_11_5505001 chr2R_5505001 RAL-177 694 chr2R 5723754 5723765 chr2R 5724531 5724542 INE-1 7 777 3.5 6.0 4.8 1.2 788 chr2R 5723754 intron ap - chr2R 5724148 intron ap - chr2R 5724542 intron ap - chr2R_7_5720001 chr2R_5720001 RAL-177 695 chr2R 5724972 5725023 chr2R 5725222 5725273 20 250 3.5 4.5 4.0 4.0 301 chr2R 5724972 intron ap - chr2R 5725122 intron ap - chr2R 5725273 intron ap - chr2R_20_5725001 chr2R_5725001 RAL-177 696 chr2R 5772545 5772550 chr2R 5772622 5772664 7 91 1.0 1.5 1.2 3.2 119 chr2R 5772545 3` UTR Gp210 + chr2R 5772604 3` UTR Gp210 + chr2R 5772664 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 RAL-177 697 chr2R 5772830 5772857 chr2R 5772932 5772932 6 98 3.0 3.0 3.0 1.5 102 chr2R 5772830 3` UTR Gp210 + chr2R 5772881 3` UTR Gp210 + chr2R 5772932 3` UTR Gp210 + chr2R_6_5770001 chr2R_5770001 RAL-177 698 chr2R 5790444 5790487 chr2R 5790549 5790592 23 105 6.5 6.0 6.2 3.2 148 chr2R 5790444 intergenic not near genes chr2R 5790518 intergenic not near genes chr2R 5790592 intergenic not near genes chr2R_23_5790001 chr2R_5790001 RAL-177 699 chr2R 5869258 5869309 chr2R 5874354 5874405 flea 16 5095 2.5 2.5 2.5 4.6 5147 chr2R 5869258 intergenic not near genes chr2R 5871832 intergenic not near genes chr2R 5874405 intergenic not near genes chr2R_16_5870001 chr2R_5870001 RAL-177 700 chr2R 5876867 5876899 chr2R 5876981 5877021 4 120 4.0 9.0 6.5 0.5 154 chr2R 5876867 intergenic not near genes chr2R 5876944 intergenic not near genes chr2R 5877021 intergenic not near genes chr2R_4_5875001 chr2R_5875001 RAL-177 701 chr2R 5878908 5878958 chr2R 5879008 5879058 16 100 1.5 3.0 2.2 5.0 150 chr2R 5878908 intergenic CG44438 - chr2R 5878983 intergenic CG44438 - chr2R 5879058 intergenic CG44438 - chr2R_16_5875001 chr2R_5875001 RAL-177 702 chr2R 5885345 5885370 chr2R 5885494 5885519 6 149 2.5 1.5 2.0 2.0 174 chr2R 5885345 5` UTR CR44125 + chr2R 5885432 5` UTR CR44125 + chr2R 5885519 5` UTR CR44125 + chr2R_6_5885001 chr2R_5885001 RAL-177 703 chr2R 5902137 5902193 chr2R 5909716 5909772 17.6 10 7579 5.0 3.0 4.0 2.0 7635 chr2R 5902137 intron CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909772 intron CG43366 + chr2R_10_5905001 chr2R_5905001 RAL-177 704 chr2R 5941613 5941623 chr2R 5942130 5942146 4 522 1.0 6.0 3.5 0.9 533 chr2R 5941613 intergenic not near genes chr2R 5941880 intergenic not near genes chr2R 5942146 intergenic not near genes chr2R_4_5940001 chr2R_5940001 RAL-177 705 chr2R 5941624 5941650 chr2R 5942125 5942173 14 514 1.0 4.0 2.5 4.0 549 chr2R 5941624 intergenic not near genes chr2R 5941898 intergenic not near genes chr2R 5942173 intergenic not near genes chr2R_14_5940001 chr2R_5940001 RAL-177 706 chr2R 5953061 5953087 chr2R 5953159 5953174 4 94 5.5 0.5 3.0 1.0 113 chr2R 5953061 intergenic not near genes chr2R 5953118 intergenic not near genes chr2R 5953174 intergenic not near genes chr2R_4_5950001 chr2R_5950001 RAL-177 707 chr2R 5991934 5991964 chr2R 5992042 5992067 9 107 1.5 10.0 5.8 1.3 133 chr2R 5991934 intron Src42A + chr2R 5992000 intron Src42A + chr2R 5992067 intron Src42A + chr2R_9_5990001 chr2R_5990001 RAL-177 708 chr2R 6025015 6025192 chr2R 6025131 6025420 18 196 1.5 2.0 1.8 6.4 405 chr2R 6025015 intergenic not near genes chr2R 6025218 intergenic not near genes chr2R 6025420 intergenic not near genes chr2R_18_6025001 chr2R_6025001 RAL-177 709 chr2R 6033423 6033473 chr2R 6033528 6033563 9 100 1.0 6.0 3.5 2.0 140 chr2R 6033423 intron SCAP - chr2R 6033493 intron SCAP - chr2R 6033563 intron SCAP - chr2R_9_6030001 chr2R_6030001 RAL-177 710 chr2R 6037436 6037479 chr2R 6037541 6037584 22 105 1.5 5.5 3.5 4.9 148 chr2R 6037436 intron CG14591 - chr2R 6037510 intron CG14591 - chr2R 6037584 intron CG14591 - chr2R_22_6035001 chr2R_6035001 RAL-177 711 chr2R 6088352 6088387 chr2R 6088465 6088500 15 113 3.0 4.5 3.8 3.1 148 chr2R 6088352 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088500 intergenic not near genes chr2R_15_6085001 chr2R_6085001 RAL-177 712 chr2R 6129310 6129357 chr2R 6129408 6129445 16 97 3.0 2.0 2.5 4.6 135 chr2R 6129310 intron EcR - chr2R 6129378 intron EcR - chr2R 6129445 intron EcR - chr2R_16_6125001 chr2R_6125001 RAL-177 713 chr2R 6168178 6168226 chr2R 6168280 6168328 22 101 4.5 3.5 4.0 4.4 150 chr2R 6168178 intron EcR - chr2R 6168253 intron EcR - chr2R 6168328 intron EcR - chr2R_22_6165001 chr2R_6165001 RAL-177 714 chr2R 6178102 6178138 chr2R 6178248 6178284 9 146 3.0 6.0 4.5 1.6 182 chr2R 6178102 intergenic not near genes chr2R 6178193 intergenic not near genes chr2R 6178284 intergenic not near genes chr2R_9_6175001 chr2R_6175001 RAL-177 715 chr2R 6194669 6194690 chr2R 6194772 6194793 7 102 6.0 4.0 5.0 1.2 124 chr2R 6194669 intron Ptr - chr2R 6194731 intron Ptr - chr2R 6194793 intron Ptr - chr2R_7_6190001 chr2R_6190001 RAL-177 716 chr2R 6236706 6236736 chr2R 6236833 6236863 15 126 0.5 3.5 2.0 5.0 157 chr2R 6236706 intron bin3 + chr2R 6236784 intron bin3 + chr2R 6236863 intron bin3 + chr2R_15_6235001 chr2R_6235001 RAL-177 717 chr2R 6494511 6494553 chr2R 6499293 6499335 F-element 19 4778 3.5 5.5 4.5 3.5 4824 chr2R 6494511 intergenic not near genes chr2R 6496923 intergenic not near genes chr2R 6499335 intergenic not near genes chr2R_19_6495001 chr2R_6495001 RAL-177 718 chr2R 6538360 6538409 chr2R 6538458 6538507 16 98 6.5 3.5 5.0 2.7 147 chr2R 6538360 intron jing + chr2R 6538434 intron jing + chr2R 6538507 intron jing + chr2R_16_6535001 chr2R_6535001 RAL-177 719 chr2R 6539803 6539856 chr2R 6539946 6539991 22 132 3.5 1.5 2.5 6.3 188 chr2R 6539803 intron jing + chr2R 6539897 intron jing + chr2R 6539991 intron jing + chr2R_22_6535001 chr2R_6535001 RAL-177 720 chr2R 6579780 6579805 chr2R 6584887 6584912 flea 9 5107 4.5 7.0 5.8 1.3 5132 chr2R 6579780 intron jing + chr2R 6582346 intron jing + chr2R 6584912 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-177 721 chr2R 6664165 6664202 chr2R 6665986 6666023 S-element 11 1820 6.0 6.0 6.0 1.6 1858 chr2R 6664165 intron,3` UTR Adf1 +,CR45128 - chr2R 6665094 intron Adf1 + chr2R 6666023 intron Adf1 + chr2R_11_6665001 chr2R_6665001 RAL-177 722 chr2R 6699571 6699621 chr2R 6699676 6699726 22 101 6.5 7.0 6.8 2.8 155 chr2R 6699571 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699726 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_22_6695001 chr2R_6695001 RAL-177 723 chr2R 6712570 6712600 chr2R 6712682 6712717 7 115 7.0 5.0 6.0 1.0 147 chr2R 6712570 intron,intron CG3409 -,CG45092 - chr2R 6712644 intron,intron CG3409 -,CG45092 - chr2R 6712717 intron,intron CG3409 -,CG45092 - chr2R_7_6710001 chr2R_6710001 RAL-177 724 chr2R 6846317 6846322 chr2R 6846413 6846419 4 95 0.0 11.5 5.8 0.6 102 chr2R 6846317 intergenic not near genes chr2R 6846368 intergenic not near genes chr2R 6846419 intergenic not near genes chr2R_4_6845001 chr2R_6845001 RAL-177 725 chr2R 6887512 6887562 chr2R 6887621 6887671 19 109 5.5 3.5 4.5 3.5 159 chr2R 6887512 intron Spn42De + chr2R 6887592 intron Spn42De + chr2R 6887671 intron Spn42De + chr2R_19_6885001 chr2R_6885001 RAL-177 726 chr2R 6921651 6921689 chr2R 6921765 6921803 9 114 3.5 3.5 3.5 2.0 152 chr2R 6921651 3` UTR CG30158 + chr2R 6921727 3` UTR CG30158 + chr2R 6921803 3` UTR CG30158 + chr2R_9_6920001 chr2R_6920001 RAL-177 727 chr2R 6952146 6952181 chr2R 6959746 6959781 opus 13 7600 6.5 7.0 6.8 1.7 7635 chr2R 6952146 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955964 intron,intron mim -,CheB42c - chr2R 6959781 intron,intron mim -,CheB42c - chr2R_13_6955001 chr2R_6955001 RAL-177 728 chr2R 6964263 6964315 chr2R 6964360 6964412 25 97 6.0 5.5 5.8 3.7 149 chr2R 6964263 intron,intron mim -,CheB42c - chr2R 6964338 intron,intron mim -,CheB42c - chr2R 6964412 intron,intron mim -,CheB42c - chr2R_25_6960001 chr2R_6960001 RAL-177 729 chr2R 7009279 7009326 chr2R 7009633 7009680 26 353 8.5 6.0 7.2 3.2 401 chr2R 7009279 intergenic Tsp42Ed - chr2R 7009480 intergenic Tsp42Ed - chr2R 7009680 3` UTR Tsp42Ed - chr2R_26_7005001 chr2R_7005001 RAL-177 730 chr2R 7052014 7052068 chr2R 7052113 7052155 19 96 5.0 1.5 3.2 4.5 141 chr2R 7052014 intergenic lbm + chr2R 7052084 intergenic lbm + chr2R 7052155 intergenic lbm + chr2R_19_7050001 chr2R_7050001 RAL-177 731 chr2R 7064899 7064913 chr2R 7064995 7065009 6 94 11.0 3.0 7.0 0.8 110 chr2R 7064899 intron Tsp42Er + chr2R 7064954 intron Tsp42Er + chr2R 7065009 intron Tsp42Er + chr2R_6_7060001 chr2R_7060001 RAL-177 732 chr2R 7067574 7067624 chr2R 7067678 7067728 20 104 3.5 9.0 6.2 2.8 154 chr2R 7067574 intergenic not near genes chr2R 7067651 intergenic not near genes chr2R 7067728 intergenic not near genes chr2R_20_7065001 chr2R_7065001 RAL-177 733 chr2R 7091195 7091242 chr2R 7091297 7091344 33 100 4.5 8.5 6.5 4.4 149 chr2R 7091195 intron esn + chr2R 7091270 intron esn + chr2R 7091344 intron esn + chr2R_33_7090001 chr2R_7090001 RAL-177 734 chr2R 7120095 7120125 chr2R 7120258 7120288 8 163 3.0 11.5 7.2 1.0 193 chr2R 7120095 intron esn + chr2R 7120192 intron esn + chr2R 7120288 intron esn + chr2R_8_7120001 chr2R_7120001 RAL-177 735 chr2R 7162312 7162356 chr2R 7162420 7162464 18 107 6.0 3.5 4.8 3.1 152 chr2R 7162312 intron pk + chr2R 7162388 intron pk + chr2R 7162464 intron pk + chr2R_18_7160001 chr2R_7160001 RAL-177 736 chr2R 7196552 7196591 chr2R 7201347 7201386 F-element 16 4794 7.0 1.0 4.0 3.2 4834 chr2R 7196552 intron pk + chr2R 7198969 intron pk + chr2R 7201386 intron pk + chr2R_16_7195001 chr2R_7195001 RAL-177 737 chr2R 7206051 7206058 chr2R 7206477 7206484 4 426 10.5 1.0 5.8 0.6 433 chr2R 7206051 intron pk + chr2R 7206268 intron pk + chr2R 7206484 intron pk + chr2R_4_7205001 chr2R_7205001 RAL-177 738 chr2R 7206060 7206101 chr2R 7206476 7206527 13 423 4.0 1.0 2.5 3.7 467 chr2R 7206060 intron pk + chr2R 7206294 intron pk + chr2R 7206527 intron pk + chr2R_13_7205001 chr2R_7205001 RAL-177 739 chr2R 7209861 7209874 chr2R 7217642 7217655 roo 8 7781 3.5 7.5 5.5 1.2 7794 chr2R 7209861 intron pk + chr2R 7213758 intron pk + chr2R 7217655 intron pk + chr2R_8_7210001 chr2R_7210001 RAL-177 740 chr2R 7235802 7235849 chr2R 7240914 7240945 jockey 15 5108 6.0 3.5 4.8 2.6 5143 chr2R 7235802 intergenic not near genes chr2R 7238374 intergenic not near genes chr2R 7240945 intergenic not near genes chr2R_15_7235001 chr2R_7235001 RAL-177 741 chr2R 7373601 7373653 chr2R 7373697 7373749 10 93 3.0 4.5 3.8 2.1 148 chr2R 7373601 intron Dscam1 - chr2R 7373675 intron Dscam1 - chr2R 7373749 intron Dscam1 - chr2R_10_7370001 chr2R_7370001 RAL-177 742 chr2R 7393355 7393361 chr2R 7393465 7393465 5 108 9.5 4.5 7.0 0.6 110 chr2R 7393355 intergenic CG1707 -,Gr43a - chr2R 7393410 intergenic CG1707 -,Gr43a - chr2R 7393465 intergenic CG1707 -,Gr43a - chr2R_5_7390001 chr2R_7390001 RAL-177 743 chr2R 7393366 7393403 chr2R 7393460 7393513 7 101 4.5 3.0 3.8 1.5 147 chr2R 7393366 intergenic CG1707 -,Gr43a - chr2R 7393440 intergenic CG1707 -,Gr43a - chr2R 7393513 intergenic CG1707 -,Gr43a - chr2R_7_7390001 chr2R_7390001 RAL-177 744 chr2R 7418120 7418168 chr2R 7418219 7418267 28 98 8.0 6.0 7.0 3.5 147 chr2R 7418120 intergenic not near genes chr2R 7418194 intergenic not near genes chr2R 7418267 intergenic not near genes chr2R_28_7415001 chr2R_7415001 RAL-177 745 chr2R 7419980 7420005 chr2R 7420086 7420109 11 105 14.0 0.0 7.0 1.4 129 chr2R 7419980 5` UTR so + chr2R 7420044 intron so + chr2R 7420109 intron so + chr2R_11_7420001 chr2R_7420001 RAL-177 746 chr2R 7434880 7434910 chr2R 7439201 7439230 Juan 14 4321 6.5 6.0 6.2 1.9 4350 chr2R 7434880 intergenic so + chr2R 7437055 intergenic not near genes chr2R 7439230 intergenic not near genes chr2R_14_7435001 chr2R_7435001 RAL-177 747 chr2R 7446027 7446071 chr2R 7446272 7446316 17 245 3.0 4.5 3.8 3.5 289 chr2R 7446027 intergenic fa2h -,CG30503 -,kappaB-Ras - chr2R 7446172 intergenic fa2h -,CG30503 -,kappaB-Ras - chr2R 7446316 3` UTR fa2h - chr2R_17_7445001 chr2R_7445001 RAL-177 748 chr2R 7608389 7608429 chr2R 7613612 7613612 I-element 12 5220 8.0 7.5 7.8 1.4 5223 chr2R 7608389 intron CG1358 - chr2R 7611000 intron CG1358 - chr2R 7613612 intron CG1358 - chr2R_12_7610001 chr2R_7610001 RAL-177 749 chr2R 7714062 7714105 chr2R 7714158 7714189 14 95 7.0 1.5 4.2 2.7 127 chr2R 7714062 exon CG1942 + chr2R 7714126 3` UTR CG1942 + chr2R 7714189 intergenic CG1942 + chr2R_14_7710001 chr2R_7710001 RAL-177 750 chr2R 7742758 7742790 chr2R 7742851 7742856 6 87 2.0 1.5 1.8 2.1 98 chr2R 7742758 intron,intron CG30497 -,CG45093 - chr2R 7742807 intron,intron CG30497 -,CG45093 - chr2R 7742856 intron,intron CG30497 -,CG45093 - chr2R_6_7740001 chr2R_7740001 RAL-177 751 chr2R 7743463 7743513 chr2R 7743564 7743612 4 93 4.0 1.0 2.5 1.1 149 chr2R 7743463 intron,intron CG30497 -,CG45093 - chr2R 7743538 intron,intron CG30497 -,CG45093 - chr2R 7743612 intron,intron CG30497 -,CG45093 - chr2R_4_7740001 chr2R_7740001 RAL-177 752 chr2R 7787064 7787112 chr2R 7787166 7787214 21 101 7.5 2.0 4.8 3.6 150 chr2R 7787064 intron CanB2 + chr2R 7787139 intron CanB2 + chr2R 7787214 intron CanB2 + chr2R_21_7785001 chr2R_7785001 RAL-177 753 chr2R 7790106 7790109 chr2R 7790417 7790420 4 311 22.0 7.0 14.5 0.3 314 chr2R 7790106 intergenic CG12825 +,CG12824 + chr2R 7790263 intergenic CG12824 +,CG12825 + chr2R 7790420 exon CG12824 + chr2R_4_7790001 chr2R_7790001 RAL-177 754 chr2R 7790111 7790155 chr2R 7790413 7790464 11 301 7.0 6.5 6.8 1.4 353 chr2R 7790111 intergenic CG12825 +,CG12824 + chr2R 7790288 intergenic CG12824 +,CG12825 + chr2R 7790464 exon CG12824 + chr2R_11_7790001 chr2R_7790001 RAL-177 755 chr2R 7812222 7812268 chr2R 7812318 7812364 13 96 3.5 5.5 4.5 2.4 142 chr2R 7812222 intergenic CG1550 -,CG1882 + chr2R 7812293 intergenic CG1882 +,CG1550 - chr2R 7812364 intergenic CG1882 +,CG1550 - chr2R_13_7810001 chr2R_7810001 RAL-177 756 chr2R 7815660 7815701 chr2R 7822143 7822190 Burdock 14 6486 3.5 4.5 4.0 2.8 6530 chr2R 7815660 intergenic CG1882 + chr2R 7818925 intergenic not near genes chr2R 7822190 3` UTR cathD - chr2R_14_7815001 chr2R_7815001 RAL-177 757 chr2R 7862236 7862251 chr2R 7867369 7867384 flea 6 5132 0.5 9.0 4.8 1.0 5148 chr2R 7862236 intron Dgk - chr2R 7864810 intron Dgk - chr2R 7867384 intron Dgk - chr2R_6_7860001 chr2R_7860001 RAL-177 758 chr2R 7869195 7869214 chr2R 7873974 7874011 Doc 7 4791 5.5 3.0 4.2 1.3 4816 chr2R 7869195 intron Dgk - chr2R 7871603 intron Dgk - chr2R 7874011 intron Dgk - chr2R_7_7870001 chr2R_7870001 RAL-177 759 chr2R 7942162 7942206 chr2R 7942273 7942317 19 108 5.0 8.0 6.5 2.5 155 chr2R 7942162 3` UTR CG14764 - chr2R 7942240 3` UTR CG14764 - chr2R 7942317 3` UTR CG14764 - chr2R_19_7940001 chr2R_7940001 RAL-177 760 chr2R 7942932 7942974 chr2R 7943031 7943054 9 89 8.0 3.5 5.8 1.3 122 chr2R 7942932 intron CG14764 - chr2R 7942993 intron CG14764 - chr2R 7943054 intron CG14764 - chr2R_9_7940001 chr2R_7940001 RAL-177 761 chr2R 8067050 8067080 chr2R 8067154 8067169 6 101 4.5 6.5 5.5 0.9 119 chr2R 8067050 intron CG17977 - chr2R 8067110 intron CG17977 - chr2R 8067169 exon CG17977 - chr2R_6_8065001 chr2R_8065001 RAL-177 762 chr2R 8089238 8089287 chr2R 8089344 8089393 25 105 4.5 3.0 3.8 5.2 155 chr2R 8089238 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089393 intergenic sut3 +,sut2 + chr2R_25_8085001 chr2R_8085001 RAL-177 763 chr2R 8152666 8152709 chr2R 8152771 8152786 9 102 6.0 4.5 5.2 1.5 120 chr2R 8152666 intron,intron Lpin -,kermit - chr2R 8152726 intron,intron Lpin -,kermit - chr2R 8152786 intron,intron Lpin -,kermit - chr2R_9_8150001 chr2R_8150001 RAL-177 764 chr2R 8173755 8173774 chr2R 8173851 8173862 5 96 3.0 4.0 3.5 1.1 107 chr2R 8173755 intergenic CG14757 -,LRP1 + chr2R 8173808 intergenic CG14757 -,LRP1 + chr2R 8173862 intergenic CG14757 -,LRP1 + chr2R_5_8170001 chr2R_8170001 RAL-177 765 chr2R 8173777 8173790 chr2R 8173850 8173881 8 92 2.5 3.5 3.0 2.0 104 chr2R 8173777 intergenic CG14757 -,LRP1 + chr2R 8173829 intergenic CG14757 -,LRP1 + chr2R 8173881 intergenic CG14757 -,LRP1 + chr2R_8_8170001 chr2R_8170001 RAL-177 766 chr2R 8249548 8249838 chr2R 8249650 8249937 18 106 10.0 6.5 8.2 2.0 389 chr2R 8249548 5` UTR CG44439 - chr2R 8249742 intergenic CG44439 - chr2R 8249937 intergenic CG44439 - chr2R_18_8245001 chr2R_8245001 RAL-177 767 chr2R 8330845 8330882 chr2R 8331351 8331388 roo 16 505 13.5 10.5 12.0 1.2 543 chr2R 8330845 intron pdm3 + chr2R 8331116 intron pdm3 + chr2R 8331388 intron pdm3 + chr2R_16_8330001 chr2R_8330001 RAL-177 768 chr2R 8338622 8338671 chr2R 8338724 8338773 18 100 0.5 5.0 2.8 4.7 151 chr2R 8338622 intron pdm3 + chr2R 8338698 intron pdm3 + chr2R 8338773 intron pdm3 + chr2R_18_8335001 chr2R_8335001 RAL-177 769 chr2R 8398219 8398237 chr2R 8402990 8403038 Doc 6 4794 10.5 3.0 6.8 0.8 4819 chr2R 8398219 intron CG2121 - chr2R 8400628 intron CG2121 - chr2R 8403038 intron CG2121 - chr2R_6_8400001 chr2R_8400001 RAL-177 770 chr2R 8416298 8416310 chr2R 8417142 8417154 I-element 6 844 3.5 4.5 4.0 1.2 856 chr2R 8416298 intergenic not near genes chr2R 8416726 intergenic CG43296 - chr2R 8417154 intergenic CG43296 - chr2R_6_8415001 chr2R_8415001 RAL-177 771 chr2R 8441929 8441939 chr2R 8442086 8442096 4 157 12.5 2.0 7.2 0.5 167 chr2R 8441929 intron Cyp4ad1 - chr2R 8442012 intron Cyp4ad1 - chr2R 8442096 intron Cyp4ad1 - chr2R_4_8440001 chr2R_8440001 RAL-177 772 chr2R 8518781 8518804 chr2R 12066250 12066287 5 3547484 15.5 1.5 8.5 0.5 3547506 chr2R 8518781 intron mtt - chr2R 10292534 intron CAP + chr2R 12066287 intron CG8888 - chr2R_5_10290001 chr2R_10290001 RAL-177 773 chr2R 8524929 8524981 chr2R 8525086 8525140 17 155 4.5 3.0 3.8 3.5 211 chr2R 8524929 intron mtt - chr2R 8525034 intron mtt - chr2R 8525140 intron mtt - chr2R_17_8525001 chr2R_8525001 RAL-177 774 chr2R 8615755 8615804 chr2R 8615888 8615937 20 132 2.0 4.5 3.2 4.8 182 chr2R 8615755 intron Cirl + chr2R 8615846 intron Cirl + chr2R 8615937 5` UTR Cirl + chr2R_20_8615001 chr2R_8615001 RAL-177 775 chr2R 8714705 8714718 chr2R 8714812 8714824 8 106 0.0 5.0 2.5 2.3 119 chr2R 8714705 3` UTR PGRP-SC1b + chr2R 8714764 3` UTR PGRP-SC1b + chr2R 8714824 3` UTR PGRP-SC1b + chr2R_8_8710001 chr2R_8710001 RAL-177 776 chr2R 8722752 8722788 chr2R 8723008 8723049 pogo 12 254 1.0 3.5 2.2 3.8 297 chr2R 8722752 intron CG14767 - chr2R 8722900 intron CG14767 - chr2R 8723049 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-177 777 chr2R 8777926 8777946 chr2R 8784150 8784170 diver 8 6221 4.5 7.5 6.0 1.1 6244 chr2R 8777926 intergenic not near genes chr2R 8781048 intergenic not near genes chr2R 8784170 intergenic not near genes chr2R_8_8780001 chr2R_8780001 RAL-177 778 chr2R 8922111 8922152 chr2R 8922284 8922300 9 165 3.0 0.5 1.8 3.2 189 chr2R 8922111 exon Spt - chr2R 8922206 exon Spt - chr2R 8922300 intron Spt - chr2R_9_8920001 chr2R_8920001 RAL-177 779 chr2R 8924442 8924457 chr2R 8924534 8924544 5 92 7.5 6.5 7.0 0.6 102 chr2R 8924442 exon CG8243 + chr2R 8924493 exon CG8243 + chr2R 8924544 exon CG8243 + chr2R_5_8920001 chr2R_8920001 RAL-177 780 chr2R 8960439 8960481 chr2R 8960611 8960653 22 169 6.5 6.5 6.5 2.9 214 chr2R 8960439 exon babo + chr2R 8960546 3` UTR babo + chr2R 8960653 3` UTR babo + chr2R_22_8960001 chr2R_8960001 RAL-177 781 chr2R 8967691 8967705 chr2R 8967828 8967842 6 137 5.5 0.0 2.8 1.6 151 chr2R 8967691 intron CG8216 - chr2R 8967766 intron CG8216 - chr2R 8967842 intron CG8216 - chr2R_6_8965001 chr2R_8965001 RAL-177 782 chr2R 8976603 8976638 chr2R 8976687 8976711 6 88 4.5 1.0 2.8 1.6 108 chr2R 8976603 intron CG8213 - chr2R 8976657 intron CG8213 - chr2R 8976711 intron CG8213 - chr2R_6_8975001 chr2R_8975001 RAL-177 783 chr2R 8995922 8995935 chr2R 8996029 8996042 5 107 6.5 6.5 6.5 0.7 120 chr2R 8995922 exon Np - chr2R 8995982 intron Np - chr2R 8996042 intron Np - chr2R_5_8995001 chr2R_8995001 RAL-177 784 chr2R 8995937 8995960 chr2R 8996024 8996067 8 104 2.0 6.5 4.2 1.5 130 chr2R 8995937 exon Np - chr2R 8996002 intron Np - chr2R 8996067 intron Np - chr2R_8_8995001 chr2R_8995001 RAL-177 785 chr2R 9031386 9031430 chr2R 9031481 9031496 12 91 3.5 1.0 2.2 3.8 110 chr2R 9031386 intergenic CG8170 - chr2R 9031441 intergenic CG8170 - chr2R 9031496 intergenic CG8170 - chr2R_12_9030001 chr2R_9030001 RAL-177 786 chr2R 9065895 9065949 chr2R 9065997 9066051 14 102 5.5 3.5 4.5 2.5 156 chr2R 9065895 intron ana + chr2R 9065973 intron ana + chr2R 9066051 intron ana + chr2R_14_9065001 chr2R_9065001 RAL-177 787 chr2R 9079392 9079436 chr2R 9079518 9079535 13 124 2.5 3.5 3.0 3.2 143 chr2R 9079392 intron CG8083 + chr2R 9079464 intron CG8083 + chr2R 9079535 intron CG8083 + chr2R_13_9075001 chr2R_9075001 RAL-177 788 chr2R 9151285 9151329 chr2R 9157775 9157819 Burdock 10 6490 4.0 7.0 5.5 1.5 6534 chr2R 9151285 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157819 intergenic CG8008 - chr2R_10_9150001 chr2R_9150001 RAL-177 789 chr2R 9212698 9212714 chr2R 9213178 9213220 roo 5 501 3.0 4.0 3.5 1.1 522 chr2R 9212698 intergenic CR45309 + chr2R 9212959 intergenic CR45309 + chr2R 9213220 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-177 790 chr2R 9236586 9236624 chr2R 9236693 9236731 11 107 5.0 2.5 3.8 2.3 145 chr2R 9236586 intron hig - chr2R 9236658 intron hig - chr2R 9236731 intron hig - chr2R_11_9235001 chr2R_9235001 RAL-177 791 chr2R 9327150 9327156 chr2R 9327272 9327278 5 122 0.0 4.5 2.2 1.6 128 chr2R 9327150 intron,intron CG13739 -,CG13954 - chr2R 9327214 intron,intron CG13739 -,CG13954 - chr2R 9327278 intron,intron CG13739 -,CG13954 - chr2R_5_9325001 chr2R_9325001 RAL-177 792 chr2R 9340516 9340553 chr2R 9340786 9340823 9 267 5.0 5.0 5.0 1.5 307 chr2R 9340516 intron,intron CG13739 -,CG13954 - chr2R 9340670 intron,intron CG13739 -,CG13954 - chr2R 9340823 intron,intron CG13739 -,CG13954 - chr2R_9_9340001 chr2R_9340001 RAL-177 793 chr2R 9368110 9368153 chr2R 9368206 9368233 10 89 4.5 0.0 2.2 3.1 123 chr2R 9368110 intron CG13954 - chr2R 9368172 intron CG13954 - chr2R 9368233 intron CG13954 - chr2R_10_9365001 chr2R_9365001 RAL-177 794 chr2R 9390870 9390914 chr2R 9390976 9391020 17 106 5.5 7.0 6.2 2.4 150 chr2R 9390870 exon l(2)03659 + chr2R 9390945 intron l(2)03659 + chr2R 9391020 exon l(2)03659 + chr2R_17_9390001 chr2R_9390001 RAL-177 795 chr2R 9461225 9461257 chr2R 9461328 9461366 8 107 2.5 5.5 4.0 1.6 141 chr2R 9461225 intron Camta + chr2R 9461296 intron Camta + chr2R 9461366 intron Camta + chr2R_8_9460001 chr2R_9460001 RAL-177 796 chr2R 9479557 9479598 chr2R 9479657 9479698 8 99 6.5 5.0 5.8 1.2 141 chr2R 9479557 intergenic not near genes chr2R 9479628 intergenic not near genes chr2R 9479698 intergenic not near genes chr2R_8_9475001 chr2R_9475001 RAL-177 797 chr2R 9480060 9480110 chr2R 9490611 9490644 roo 22 10550 3.5 5.5 4.5 4.0 10584 chr2R 9480060 intergenic not near genes chr2R 9485352 intergenic not near genes chr2R 9490644 intergenic not near genes chr2R_22_9485001 chr2R_9485001 RAL-177 798 chr2R 9510658 9510698 chr2R 9510794 9510797 14 132 3.5 5.0 4.2 2.7 139 chr2R 9510658 intron brp + chr2R 9510728 intron brp + chr2R 9510797 intron brp + chr2R_14_9510001 chr2R_9510001 RAL-177 799 chr2R 9541613 9541642 chr2R 9541710 9541738 11 97 0.0 5.0 2.5 3.1 125 chr2R 9541613 intergenic brp +,CG1888 - chr2R 9541676 intergenic brp +,CG1888 - chr2R 9541738 intergenic brp +,CG1888 - chr2R_11_9540001 chr2R_9540001 RAL-177 800 chr2R 9561805 9561844 chr2R 9561912 9561952 11 107 0.0 0.0 0.0 11.0 147 chr2R 9561805 3` UTR,intron CR45281 -,CG1809 + chr2R 9561878 3` UTR,intron CR45281 -,CG1809 + chr2R 9561952 3` UTR,intron CR45281 -,CG1809 + chr2R_11_9560001 chr2R_9560001 RAL-177 801 chr2R 9605812 9605855 chr2R 9605939 9605982 16 126 7.5 6.5 7.0 2.0 170 chr2R 9605812 3` UTR CR44285 - chr2R 9605897 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9605982 intergenic GstT1 +,CR44285 -,CG1902 + chr2R_16_9605001 chr2R_9605001 RAL-177 802 chr2R 9618552 9618564 chr2R 9618800 9618812 6 246 7.0 0.0 3.5 1.3 260 chr2R 9618552 intron Mmp2 - chr2R 9618682 intron Mmp2 - chr2R 9618812 intron Mmp2 - chr2R_6_9615001 chr2R_9615001 RAL-177 803 chr2R 9699408 9699435 chr2R 9699494 9699542 6 96 4.0 6.0 5.0 1.0 134 chr2R 9699408 intergenic not near genes chr2R 9699475 intergenic not near genes chr2R 9699542 intergenic not near genes chr2R_6_9695001 chr2R_9695001 RAL-177 804 chr2R 9726598 9726643 chr2R 9734169 9734204 17.6 17 7570 9.5 9.5 9.5 1.6 7606 chr2R 9726598 intron sqa - chr2R 9730401 intron sqa - chr2R 9734204 intron sqa - chr2R_17_9730001 chr2R_9730001 RAL-177 805 chr2R 9761288 9761298 chr2R 9761384 9761394 4 96 7.0 13.5 10.2 0.4 106 chr2R 9761288 intron trpl + chr2R 9761341 intron trpl + chr2R 9761394 intron trpl + chr2R_4_9760001 chr2R_9760001 RAL-177 806 chr2R 9871022 9871065 chr2R 9871528 9871530 roo 8 499 3.0 3.0 3.0 2.0 508 chr2R 9871022 intron cbx - chr2R 9871276 intron cbx - chr2R 9871530 intron,5` UTR cbx -,CG18446 + chr2R_8_9870001 chr2R_9870001 RAL-177 807 chr2R 9923842 9923880 chr2R 9923938 9923972 8 94 4.0 4.5 4.2 1.5 130 chr2R 9923842 intron Mef2 - chr2R 9923907 intron Mef2 - chr2R 9923972 intron Mef2 - chr2R_8_9920001 chr2R_9920001 RAL-177 808 chr2R 7071637 7071641 chr2R 9941238 9941242 4 2869601 12.0 30.5 21.2 0.2 2869605 chr2R 7071637 3` UTR CG12831 - chr2R 8506440 intron mtt - chr2R 9941242 intron Mef2 - chr2R_4_8505001 chr2R_8505001 RAL-177 809 chr2R 9945419 9945422 chr2R 9945635 9945638 BS 4 216 5.5 2.5 4.0 0.8 219 chr2R 9945419 intron Mef2 - chr2R 9945528 intron Mef2 - chr2R 9945638 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-177 810 chr2R 9945423 9945430 chr2R 9945633 9945646 BS 5 213 5.0 2.5 3.8 1.0 223 chr2R 9945423 intron Mef2 - chr2R 9945534 intron Mef2 - chr2R 9945646 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-177 811 chr2R 9945437 9945456 chr2R 9945648 9945672 BS 4 215 2.0 4.5 3.2 1.0 235 chr2R 9945437 intron Mef2 - chr2R 9945554 intron Mef2 - chr2R 9945672 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-177 812 chr2R 9945457 9945473 chr2R 9945633 9945661 BS 5 200 1.5 2.5 2.0 1.7 204 chr2R 9945457 intron Mef2 - chr2R 9945559 intron Mef2 - chr2R 9945661 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-177 813 chr2R 10005836 10005854 chr2R 10007021 10007039 1360 5 1184 12.0 6.0 9.0 0.5 1203 chr2R 10005836 intron Pka-R2 - chr2R 10006438 intron Pka-R2 - chr2R 10007039 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-177 814 chr2R 10005861 10005881 chr2R 10007018 10007038 1360 9 1166 6.5 6.0 6.2 1.2 1177 chr2R 10005861 intron Pka-R2 - chr2R 10006450 intron Pka-R2 - chr2R 10007038 intron Pka-R2 - chr2R_9_10005001 chr2R_10005001 RAL-177 815 chr2R 10047809 10047833 chr2R 10047896 10047936 10 101 10.0 6.0 8.0 1.1 127 chr2R 10047809 intron oys - chr2R 10047872 intron oys - chr2R 10047936 intron oys - chr2R_10_10045001 chr2R_10045001 RAL-177 816 chr2R 10086921 10086934 chr2R 10087018 10087051 13 104 0.0 10.0 5.0 2.2 130 chr2R 10086921 intron,exon CG2269 +,sut4 - chr2R 10086986 intron,5` UTR CG2269 +,sut4 - chr2R 10087051 intron,5` UTR CG2269 +,sut4 - chr2R_13_10085001 chr2R_10085001 RAL-177 817 chr2R 10122720 10122751 chr2R 10122950 10122981 12 229 7.0 4.0 5.5 1.8 261 chr2R 10122720 intergenic Ccs - chr2R 10122850 intergenic Ccs - chr2R 10122981 intergenic Ccs - chr2R_12_10120001 chr2R_10120001 RAL-177 818 chr2R 10132170 10132217 chr2R 10132270 10132317 15 96 4.5 5.0 4.8 2.6 147 chr2R 10132170 intron gem + chr2R 10132244 intron gem + chr2R 10132317 exon gem + chr2R_15_10130001 chr2R_10130001 RAL-177 819 chr2R 10155835 10155883 chr2R 10155949 10155997 21 114 6.5 6.0 6.2 2.9 162 chr2R 10155835 intron KCNQ - chr2R 10155916 intron,3` UTR KCNQ -,mlt - chr2R 10155997 intron,3` UTR KCNQ -,mlt - chr2R_21_10155001 chr2R_10155001 RAL-177 820 chr2R 10168342 10168353 chr2R 10168434 10168450 4 96 3.0 11.0 7.0 0.5 108 chr2R 10168342 intron KCNQ - chr2R 10168396 intron KCNQ - chr2R 10168450 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-177 821 chr2R 10176855 10176905 chr2R 10186045 10186095 roo 23 9188 4.0 4.5 4.2 4.4 9240 chr2R 10176855 intron KCNQ - chr2R 10181475 intron KCNQ - chr2R 10186095 intron KCNQ - chr2R_23_10180001 chr2R_10180001 RAL-177 822 chr2R 10189193 10189223 chr2R 10189291 10189310 8 96 3.5 5.0 4.2 1.5 117 chr2R 10189193 intron KCNQ - chr2R 10189252 intron KCNQ - chr2R 10189310 intron KCNQ - chr2R_8_10185001 chr2R_10185001 RAL-177 823 chr2R 10189225 10189235 chr2R 10189283 10189333 4 88 2.5 4.5 3.5 0.9 108 chr2R 10189225 intron KCNQ - chr2R 10189279 intron KCNQ - chr2R 10189333 intron KCNQ - chr2R_4_10185001 chr2R_10185001 RAL-177 824 chr2R 10203625 10203636 chr2R 10203730 10203741 4 104 8.0 1.5 4.8 0.7 116 chr2R 10203625 intergenic not near genes chr2R 10203683 intergenic not near genes chr2R 10203741 intergenic not near genes chr2R_4_10200001 chr2R_10200001 RAL-177 825 chr2R 10203637 10203661 chr2R 10203726 10203766 10 103 5.5 1.5 3.5 2.2 129 chr2R 10203637 intergenic not near genes chr2R 10203702 intergenic not near genes chr2R 10203766 intergenic not near genes chr2R_10_10200001 chr2R_10200001 RAL-177 826 chr2R 10225717 10225752 chr2R 10225819 10225854 12 102 5.5 3.5 4.5 2.2 137 chr2R 10225717 intron,intron CG12912 -,Hr46 - chr2R 10225786 intron,intron CG12912 -,Hr46 - chr2R 10225854 intron,intron CG12912 -,Hr46 - chr2R_12_10225001 chr2R_10225001 RAL-177 827 chr2R 10257138 10257193 chr2R 10257249 10257304 11 111 6.0 5.0 5.5 1.7 166 chr2R 10257138 intron CG12911 + chr2R 10257221 intron CG12911 + chr2R 10257304 intron CG12911 + chr2R_11_10255001 chr2R_10255001 RAL-177 828 chr2R 10266486 10266521 chr2R 10266597 10266597 5 93 3.5 3.0 3.2 1.2 111 chr2R 10266486 intron CG12910 + chr2R 10266542 intron CG12910 + chr2R 10266597 intron CG12910 + chr2R_5_10265001 chr2R_10265001 RAL-177 829 chr2R 10274808 10274826 chr2R 10274904 10274922 10 96 11.5 0.0 5.8 1.5 114 chr2R 10274808 intron CAP + chr2R 10274865 intron CAP + chr2R 10274922 intron CAP + chr2R_10_10270001 chr2R_10270001 RAL-177 830 chr2R 10300626 10300680 chr2R 10300741 10300796 13 111 0.0 0.0 0.0 13.0 170 chr2R 10300626 intron CAP + chr2R 10300711 intron CAP + chr2R 10300796 intron CAP + chr2R_13_10300001 chr2R_10300001 RAL-177 831 chr2R 10322057 10322078 chr2R 10322159 10322180 5 99 3.5 7.5 5.5 0.8 123 chr2R 10322057 3` UTR Ndg + chr2R 10322118 intergenic Ndg + chr2R 10322180 intergenic Ndg + chr2R_5_10320001 chr2R_10320001 RAL-177 832 chr2R 10387990 10388002 chr2R 10388106 10388119 4 117 0.0 6.5 3.2 1.0 129 chr2R 10387990 intron CG42732 - chr2R 10388054 intron CG42732 - chr2R 10388119 intron CG42732 - chr2R_4_10385001 chr2R_10385001 RAL-177 833 chr2R 10409040 10409079 chr2R 10409137 10409175 10 96 0.0 3.5 1.8 3.6 135 chr2R 10409040 intron CG42732 - chr2R 10409108 intron CG42732 - chr2R 10409175 intron,exon CG42732 -,CG33477 - chr2R_10_10405001 chr2R_10405001 RAL-177 834 chr2R 10428999 10429032 chr2R 10429096 10429099 7 93 2.5 5.5 4.0 1.4 100 chr2R 10428999 intergenic not near genes chr2R 10429049 intergenic not near genes chr2R 10429099 intergenic not near genes chr2R_7_10425001 chr2R_10425001 RAL-177 835 chr2R 10429035 10429042 chr2R 10429095 10429139 6 85 2.5 5.5 4.0 1.2 104 chr2R 10429035 intergenic not near genes chr2R 10429087 intergenic not near genes chr2R 10429139 intergenic not near genes chr2R_6_10425001 chr2R_10425001 RAL-177 836 chr2R 10454077 10454130 chr2R 10454174 10454227 8 96 5.0 5.0 5.0 1.3 150 chr2R 10454077 intron,intron Galphao +,Cyp49a1 - chr2R 10454152 intron,intron Galphao +,Cyp49a1 - chr2R 10454227 intron,intron Galphao +,Cyp49a1 - chr2R_8_10450001 chr2R_10450001 RAL-177 837 chr2R 10469001 10469056 chr2R 10469147 10469202 15 144 2.5 5.0 3.8 3.1 201 chr2R 10469001 intron CG11777 + chr2R 10469102 intron CG11777 + chr2R 10469202 exon CG11777 + chr2R_15_10465001 chr2R_10465001 RAL-177 838 chr2R 10548125 10548133 chr2R 10548222 10548230 4 97 2.5 7.0 4.8 0.7 105 chr2R 10548125 intergenic not near genes chr2R 10548178 intergenic not near genes chr2R 10548230 intergenic not near genes chr2R_4_10545001 chr2R_10545001 RAL-177 839 chr2R 10551040 10551179 chr2R 10551151 10551307 11 128 0.0 0.0 0.0 11.0 267 chr2R 10551040 intergenic not near genes chr2R 10551174 intergenic not near genes chr2R 10551307 intergenic not near genes chr2R_11_10550001 chr2R_10550001 RAL-177 840 chr2R 10582098 10582139 chr2R 10582213 10582254 12 112 3.5 0.0 1.8 4.3 156 chr2R 10582098 intron psq + chr2R 10582176 intron psq + chr2R 10582254 intron psq + chr2R_12_10580001 chr2R_10580001 RAL-177 841 chr2R 10603459 10603508 chr2R 10606046 10606092 7 2588 39.5 13.5 26.5 0.3 2633 chr2R 10603459 intron psq + chr2R 10604776 intron psq + chr2R 10606092 intron psq + chr2R_7_10600001 chr2R_10600001 RAL-177 842 chr2R 10622337 10622380 chr2R 10637121 10637139 mdg1 10 14779 9.0 11.0 10.0 0.9 14802 chr2R 10622337 intron CG11883 + chr2R 10629738 intron CG11883 + chr2R 10637139 intron CG11883 + chr2R_10_10625001 chr2R_10625001 RAL-177 843 chr2R 10653204 10653229 chr2R 10653292 10653328 4 96 2.5 12.0 7.2 0.5 124 chr2R 10653204 intergenic not near genes chr2R 10653266 intergenic not near genes chr2R 10653328 intergenic not near genes chr2R_4_10650001 chr2R_10650001 RAL-177 844 chr2R 10668048 10668082 chr2R 10668144 10668178 4 88 4.0 6.0 5.0 0.7 130 chr2R 10668048 intergenic not near genes chr2R 10668113 intergenic not near genes chr2R 10668178 intergenic not near genes chr2R_4_10665001 chr2R_10665001 RAL-177 845 chr2R 10675360 10675404 chr2R 10675461 10675496 7 100 8.0 0.0 4.0 1.4 136 chr2R 10675360 intron stan + chr2R 10675428 intron stan + chr2R 10675496 intron stan + chr2R_7_10675001 chr2R_10675001 RAL-177 846 chr2R 10697588 10697620 chr2R 10697842 10697873 6 250 2.0 6.5 4.2 1.2 285 chr2R 10697588 intron stan + chr2R 10697730 intron stan + chr2R 10697873 intron stan + chr2R_6_10695001 chr2R_10695001 RAL-177 847 chr2R 10761538 10761589 chr2R 10761712 10761763 11 174 2.5 1.5 2.0 3.7 225 chr2R 10761538 intron,5` UTR CG33144 -,CR43605 + chr2R 10761650 intron,5` UTR CG33144 -,CR43605 + chr2R 10761763 intron CG33144 - chr2R_11_10760001 chr2R_10760001 RAL-177 848 chr2R 10770978 10771022 chr2R 10771079 10771123 14 101 2.5 5.5 4.0 2.8 145 chr2R 10770978 intron CG33144 - chr2R 10771050 intron CG33144 - chr2R 10771123 intron CG33144 - chr2R_14_10770001 chr2R_10770001 RAL-177 849 chr2R 10827318 10827332 chr2R 10827426 10827440 4 106 13.0 6.0 9.5 0.4 122 chr2R 10827318 exon CG12325 + chr2R 10827379 3` UTR CG12325 + chr2R 10827440 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_4_10825001 chr2R_10825001 RAL-177 850 chr2R 10827333 10827362 chr2R 10827419 10827470 13 101 3.5 5.0 4.2 2.5 137 chr2R 10827333 exon CG12325 + chr2R 10827402 3` UTR CG12325 + chr2R 10827470 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_13_10825001 chr2R_10825001 RAL-177 851 chr2R 10834239 10834252 chr2R 10834703 10834709 4 458 36.5 26.5 31.5 0.1 470 chr2R 10834239 intron CG12344 - chr2R 10834474 intron CG12344 - chr2R 10834709 intron CG12344 - chr2R_4_10830001 chr2R_10830001 RAL-177 852 chr2R 10834237 10834281 chr2R 10834714 10834733 8 458 41.0 23.0 32.0 0.2 496 chr2R 10834237 intron CG12344 - chr2R 10834485 intron CG12344 - chr2R 10834733 intron CG12344 - chr2R_8_10830001 chr2R_10830001 RAL-177 853 chr2R 10947072 10947124 chr2R 10947179 10947222 8 106 6.5 0.0 3.2 1.9 150 chr2R 10947072 5` UTR CR45228 + chr2R 10947147 intergenic CR45228 + chr2R 10947222 intergenic CR45228 + chr2R_8_10945001 chr2R_10945001 RAL-177 854 chr2R 10948037 10948058 chr2R 10955595 10955637 17.6 6 7570 1.5 3.5 2.5 1.7 7600 chr2R 10948037 intergenic not near genes chr2R 10951837 intergenic not near genes chr2R 10955637 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-177 855 chr2R 11009797 11009841 chr2R 11018990 11019035 roo 12 9193 6.0 3.5 4.8 2.1 9238 chr2R 11009797 intron luna - chr2R 11014416 intron luna - chr2R 11019035 intron luna - chr2R_12_11010001 chr2R_11010001 RAL-177 856 chr2R 11019864 11019896 chr2R 11024950 11024982 jockey 8 5080 5.5 2.5 4.0 1.6 5118 chr2R 11019864 intron luna - chr2R 11022423 intron luna - chr2R 11024982 intron luna - chr2R_8_11020001 chr2R_11020001 RAL-177 857 chr2R 11019898 11019907 chr2R 11024939 11024968 jockey 7 5065 5.0 2.5 3.8 1.5 5070 chr2R 11019898 intron luna - chr2R 11022433 intron luna - chr2R 11024968 intron luna - chr2R_7_11020001 chr2R_11020001 RAL-177 858 chr2R 11059643 11059681 chr2R 11059740 11059772 11 96 8.0 7.5 7.8 1.2 129 chr2R 11059643 intron luna - chr2R 11059708 intron luna - chr2R 11059772 intron luna - chr2R_11_11055001 chr2R_11055001 RAL-177 859 chr2R 11102845 11102871 chr2R 11102947 11102973 5 102 9.0 0.0 4.5 0.9 128 chr2R 11102845 intron luna - chr2R 11102909 intron luna - chr2R 11102973 intron luna - chr2R_5_11100001 chr2R_11100001 RAL-177 860 chr2R 11144287 11144319 chr2R 11144398 11144440 7 119 0.5 4.5 2.5 2.0 153 chr2R 11144287 intron CG13229 - chr2R 11144364 intron CG13229 - chr2R 11144440 intron CG13229 - chr2R_7_11140001 chr2R_11140001 RAL-177 861 chr2R 11158844 11158895 chr2R 11159033 11159084 13 189 2.5 2.5 2.5 3.7 240 chr2R 11158844 intron CG13229 - chr2R 11158964 intron CG13229 - chr2R 11159084 intron CG13229 - chr2R_13_11155001 chr2R_11155001 RAL-177 862 chr2R 11161086 11161127 chr2R 11161362 11161403 9 275 6.5 6.0 6.2 1.2 317 chr2R 11161086 intron,intron CG13229 -,shn + chr2R 11161244 intron,intron CG13229 -,shn + chr2R 11161403 intron,intron CG13229 -,shn + chr2R_9_11160001 chr2R_11160001 RAL-177 863 chr2R 11168048 11168090 chr2R 11168149 11168191 5 101 3.0 1.5 2.2 1.6 143 chr2R 11168048 intron,intron CG13229 -,shn + chr2R 11168120 intron,intron CG13229 -,shn + chr2R 11168191 intron,intron CG13229 -,shn + chr2R_5_11165001 chr2R_11165001 RAL-177 864 chr2R 11179250 11179285 chr2R 11179356 11179391 11 105 8.5 4.0 6.2 1.5 141 chr2R 11179250 intron shn + chr2R 11179320 intron shn + chr2R 11179391 intron shn + chr2R_11_11175001 chr2R_11175001 RAL-177 865 chr2R 11184672 11184688 chr2R 11184769 11184785 9 96 15.5 11.5 13.5 0.6 113 chr2R 11184672 intron shn + chr2R 11184728 intron shn + chr2R 11184785 intron shn + chr2R_9_11180001 chr2R_11180001 RAL-177 866 chr2R 11192085 11192116 chr2R 11192181 11192224 16 101 6.5 3.0 4.8 2.8 139 chr2R 11192085 intron shn + chr2R 11192154 intron shn + chr2R 11192224 intron shn + chr2R_16_11190001 chr2R_11190001 RAL-177 867 chr2R 11207798 11207845 chr2R 11208011 11208041 BS 18 209 8.5 12.0 10.2 1.6 243 chr2R 11207798 intron shn + chr2R 11207920 intron shn + chr2R 11208041 intron shn + chr2R_18_11205001 chr2R_11205001 RAL-177 868 chr2R 11263830 11263841 chr2R 11263966 11263977 5 136 0.0 10.0 5.0 0.8 147 chr2R 11263830 intergenic not near genes chr2R 11263904 intergenic not near genes chr2R 11263977 intergenic not near genes chr2R_5_11260001 chr2R_11260001 RAL-177 869 chr2R 11265711 11265729 chr2R 11265813 11265816 4 96 8.0 0.0 4.0 0.8 105 chr2R 11265711 exon Cpr47Ee + chr2R 11265764 exon Cpr47Ee + chr2R 11265816 intron Cpr47Ee + chr2R_4_11265001 chr2R_11265001 RAL-177 870 chr2R 11276783 11276818 chr2R 11276971 11277006 13 186 4.5 2.0 3.2 3.1 223 chr2R 11276783 intergenic not near genes chr2R 11276894 intergenic not near genes chr2R 11277006 intergenic not near genes chr2R_13_11275001 chr2R_11275001 RAL-177 871 chr2R 11297621 11297637 chr2R 11301965 11301981 flea 7 4344 8.5 0.0 4.2 1.3 4360 chr2R 11297621 intergenic CG42336 - chr2R 11299801 intergenic not near genes chr2R 11301981 5` UTR CG7741 + chr2R_7_11295001 chr2R_11295001 RAL-177 872 chr2R 11368022 11368035 chr2R 11368117 11368131 6 96 8.5 6.5 7.5 0.7 109 chr2R 11368022 intron CG13204 + chr2R 11368076 intron CG13204 + chr2R 11368131 intron CG13204 + chr2R_6_11365001 chr2R_11365001 RAL-177 873 chr2R 11415499 11415545 chr2R 11418668 11418677 opus 9 3156 3.0 5.0 4.0 1.8 3178 chr2R 11415499 intron Drip - chr2R 11417088 intron Drip - chr2R 11418677 intron Drip - chr2R_9_11415001 chr2R_11415001 RAL-177 874 chr2R 11415549 11415551 chr2R 11418667 11418694 opus 7 3134 3.0 5.0 4.0 1.4 3145 chr2R 11415549 intron Drip - chr2R 11417122 intron Drip - chr2R 11418694 intron Drip - chr2R_7_11415001 chr2R_11415001 RAL-177 875 chr2R 11472628 11472680 chr2R 11473845 11473896 pogo 16 1216 2.5 6.5 4.5 2.9 1268 chr2R 11472628 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473896 intergenic not near genes chr2R_16_11470001 chr2R_11470001 RAL-177 876 chr2R 11494592 11494633 chr2R 11494686 11494742 11 103 2.5 5.0 3.8 2.3 150 chr2R 11494592 intron inv + chr2R 11494667 intron inv + chr2R 11494742 intron inv + chr2R_11_11490001 chr2R_11490001 RAL-177 877 chr2R 11555377 11555425 chr2R 11555732 11555780 7 355 0.5 3.5 2.0 2.3 403 chr2R 11555377 intergenic not near genes chr2R 11555578 intergenic not near genes chr2R 11555780 intergenic not near genes chr2R_7_11555001 chr2R_11555001 RAL-177 878 chr2R 11567315 11567357 chr2R 11567412 11567454 10 97 2.0 4.5 3.2 2.4 139 chr2R 11567315 intergenic not near genes chr2R 11567384 intergenic not near genes chr2R 11567454 intergenic not near genes chr2R_10_11565001 chr2R_11565001 RAL-177 879 chr2R 11593837 11593884 chr2R 11594933 11594958 13 1094 5.5 5.5 5.5 2.0 1121 chr2R 11593837 intron tou - chr2R 11594398 intron tou - chr2R 11594958 intron tou - chr2R_13_11590001 chr2R_11590001 RAL-177 880 chr2R 11631385 11631409 chr2R 11631485 11631509 10 100 0.0 8.0 4.0 2.0 124 chr2R 11631385 intron CG9005 - chr2R 11631447 intron CG9005 - chr2R 11631509 intron CG9005 - chr2R_10_11630001 chr2R_11630001 RAL-177 881 chr2R 11724137 11724177 chr2R 11724242 11724286 6 105 4.5 5.0 4.8 1.0 149 chr2R 11724137 intron pyr + chr2R 11724212 intron pyr + chr2R 11724286 intron pyr + chr2R_6_11720001 chr2R_11720001 RAL-177 882 chr2R 11822985 11823003 chr2R 11823082 11823100 8 95 1.0 9.0 5.0 1.3 115 chr2R 11822985 intergenic not near genes chr2R 11823042 intergenic not near genes chr2R 11823100 intergenic not near genes chr2R_8_11820001 chr2R_11820001 RAL-177 883 chr2R 11861973 11862025 chr2R 11862078 11862130 21 105 4.5 6.5 5.5 3.2 157 chr2R 11861973 3` UTR CG34230 + chr2R 11862052 intergenic CG34230 +,TwdlBeta - chr2R 11862130 intergenic CG34230 +,TwdlBeta - chr2R_21_11860001 chr2R_11860001 RAL-177 884 chr2R 11932546 11932588 chr2R 11932679 11932725 18 133 3.0 4.5 3.8 3.8 179 chr2R 11932546 intergenic not near genes chr2R 11932636 intergenic not near genes chr2R 11932725 intergenic not near genes chr2R_18_11930001 chr2R_11930001 RAL-177 885 chr2R 12044338 12044378 chr2R 12044443 12044483 14 105 5.0 6.0 5.5 2.2 145 chr2R 12044338 intergenic Drep-1 + chr2R 12044410 intergenic Drep-1 + chr2R 12044483 intergenic Drep-1 + chr2R_14_12040001 chr2R_12040001 RAL-177 886 chr2R 8518778 8518781 chr2R 12066177 12066202 4 3547398 15.5 9.0 12.2 0.3 3547424 chr2R 8518778 intron mtt - chr2R 10292490 intron CAP + chr2R 12066202 intron CG8888 - chr2R_4_10290001 chr2R_10290001 RAL-177 887 chr2R 12096815 12096854 chr2R 12097287 12097301 10 465 7.5 5.5 6.5 1.3 486 chr2R 12096815 intron jeb - chr2R 12097058 intron jeb - chr2R 12097301 intron jeb - chr2R_10_12095001 chr2R_12095001 RAL-177 888 chr2R 12146473 12146488 chr2R 12147593 12147630 4 1127 43.0 24.5 33.8 0.1 1157 chr2R 12146473 intron,3` UTR Hen1 +,CG8878 - chr2R 12147052 intron,exon Hen1 +,CG8878 - chr2R 12147630 intron,exon Hen1 +,CG8878 - chr2R_4_12145001 chr2R_12145001 RAL-177 889 chr2R 12146495 12146501 chr2R 12147591 12147608 5 1111 37.0 24.5 30.8 0.2 1113 chr2R 12146495 intron,3` UTR Hen1 +,CG8878 - chr2R 12147052 intron,exon Hen1 +,CG8878 - chr2R 12147608 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-177 890 chr2R 12145918 12145956 chr2R 12148591 12148629 13 2678 42.5 27.0 34.8 0.4 2711 chr2R 12145918 exon Hen1 + chr2R 12147274 intron,intron Hen1 +,CG8878 - chr2R 12148629 intron,exon Hen1 +,CG8878 - chr2R_13_12145001 chr2R_12145001 RAL-177 891 chr2R 12145916 12145964 chr2R 12148630 12148637 4 2683 41.5 22.0 31.8 0.1 2721 chr2R 12145916 exon Hen1 + chr2R 12147276 intron,intron Hen1 +,CG8878 - chr2R 12148637 intron,exon Hen1 +,CG8878 - chr2R_4_12145001 chr2R_12145001 RAL-177 892 chr2R 12185980 12186037 chr2R 12186095 12186152 39 110 7.5 5.0 6.2 5.4 172 chr2R 12185980 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_39_12185001 chr2R_12185001 RAL-177 893 chr2R 12185221 12185238 chr2R 12188127 12188143 8 2905 29.0 92.5 60.8 0.1 2922 chr2R 12185221 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188143 3` UTR Cyp6g1 + chr2R_8_12185001 chr2R_12185001 RAL-177 894 chr2R 12187474 12187491 chr2R 12190071 12190104 17 2604 58.5 44.5 51.5 0.3 2630 chr2R 12187474 exon Cyp6g1 + chr2R 12188789 exon Cyp6g2 - chr2R 12190104 exon Cyp6g2 - chr2R_17_12185001 chr2R_12185001 RAL-177 895 chr2R 12187472 12187517 chr2R 12190108 12190118 6 2613 80.0 36.0 58.0 0.1 2646 chr2R 12187472 exon Cyp6g1 + chr2R 12188795 exon Cyp6g2 - chr2R 12190118 exon Cyp6g2 - chr2R_6_12185001 chr2R_12185001 RAL-177 896 chr2R 12210116 12210160 chr2R 12210214 12210261 21 100 6.0 3.0 4.5 3.8 145 chr2R 12210116 exon Sr-CII - chr2R 12210188 intron Sr-CII - chr2R 12210261 exon Sr-CII - chr2R_21_12210001 chr2R_12210001 RAL-177 897 chr2R 12236211 12236230 chr2R 12236322 12236325 7 109 5.0 3.5 4.2 1.3 114 chr2R 12236211 intergenic not near genes chr2R 12236268 intergenic not near genes chr2R 12236325 intergenic not near genes chr2R_7_12235001 chr2R_12235001 RAL-177 898 chr2R 12240742 12240767 chr2R 12240838 12240858 7 95 5.0 0.0 2.5 2.0 116 chr2R 12240742 exon CG13170 + chr2R 12240800 3` UTR CG13170 + chr2R 12240858 intergenic CG13170 +,CG43315 + chr2R_7_12240001 chr2R_12240001 RAL-177 899 chr2R 12244963 12244965 chr2R 12245041 12245059 4 88 0.5 2.5 1.5 1.6 96 chr2R 12244963 intergenic CG43244 - chr2R 12245011 intergenic CG43244 - chr2R 12245059 intergenic CG43244 - chr2R_4_12245001 chr2R_12245001 RAL-177 900 chr2R 12255697 12255750 chr2R 12255836 12255889 26 139 4.5 4.5 4.5 4.7 192 chr2R 12255697 3` UTR CG13168 + chr2R 12255793 intergenic CG13168 + chr2R 12255889 intergenic CG13168 + chr2R_26_12255001 chr2R_12255001 RAL-177 901 chr2R 12272304 12272354 chr2R 12272407 12272457 9 101 2.0 3.0 2.5 2.6 153 chr2R 12272304 intron Cam + chr2R 12272380 intron Cam + chr2R 12272457 intron Cam + chr2R_9_12270001 chr2R_12270001 RAL-177 902 chr2R 12334867 12334872 chr2R 12334965 12334970 4 98 10.0 4.0 7.0 0.5 103 chr2R 12334867 intergenic CG8490 + chr2R 12334918 intergenic CG8490 + chr2R 12334970 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-177 903 chr2R 12363362 12363412 chr2R 12363814 12363859 15 450 3.0 2.5 2.8 3.9 497 chr2R 12363362 intergenic CG30043 + chr2R 12363610 intergenic CG30043 + chr2R 12363859 intergenic not near genes chr2R_15_12360001 chr2R_12360001 RAL-177 904 chr2R 12377482 12377525 chr2R 12377623 12377667 20 142 4.0 5.5 4.8 3.4 185 chr2R 12377482 intergenic Cpr49Aa + chr2R 12377574 intergenic Cpr49Aa + chr2R 12377667 intergenic Cpr49Aa + chr2R_20_12375001 chr2R_12375001 RAL-177 905 chr2R 12393007 12393023 chr2R 12393812 12393828 4 805 2.5 4.0 3.2 1.0 821 chr2R 12393007 intergenic Or49a + chr2R 12393418 intergenic Or49a + chr2R 12393828 exon Or49a + chr2R_4_12390001 chr2R_12390001 RAL-177 906 chr2R 12492083 12492104 chr2R 12492189 12492218 8 112 9.0 2.0 5.5 1.2 135 chr2R 12492083 intron fdl - chr2R 12492150 intron fdl - chr2R 12492218 intron fdl - chr2R_8_12490001 chr2R_12490001 RAL-177 907 chr2R 12492110 12492122 chr2R 12492185 12492188 5 96 6.0 1.0 3.5 1.1 78 chr2R 12492110 intron fdl - chr2R 12492149 intron fdl - chr2R 12492188 intron fdl - chr2R_5_12490001 chr2R_12490001 RAL-177 908 chr2R 12501687 12501723 chr2R 12503857 12503890 Rt1c 4 2172 3.0 7.5 5.2 0.6 2203 chr2R 12501687 intron fdl - chr2R 12502788 intron fdl - chr2R 12503890 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-177 909 chr2R 12504128 12504178 chr2R 12504225 12504275 13 93 3.5 2.5 3.0 3.2 147 chr2R 12504128 intron fdl - chr2R 12504202 intron fdl - chr2R 12504275 intron fdl - chr2R_13_12500001 chr2R_12500001 RAL-177 910 chr2R 12529886 12529903 chr2R 12529999 12530016 5 113 8.0 0.0 4.0 1.0 130 chr2R 12529886 intron fra + chr2R 12529951 intron fra + chr2R 12530016 intron fra + chr2R_5_12525001 chr2R_12525001 RAL-177 911 chr2R 12565550 12565597 chr2R 12565943 12565965 7 372 0.0 3.5 1.8 2.5 415 chr2R 12565550 intergenic not near genes chr2R 12565758 intergenic Cyp301a1 + chr2R 12565965 intergenic Cyp301a1 + chr2R_7_12565001 chr2R_12565001 RAL-177 912 chr2R 12707502 12707530 chr2R 12715888 12715916 roo 9 8386 6.0 3.0 4.5 1.6 8414 chr2R 12707502 intron CG42663 + chr2R 12711709 intron CG42663 + chr2R 12715916 intron CG42663 + chr2R_9_12710001 chr2R_12710001 RAL-177 913 chr2R 12707534 12707547 chr2R 12715884 12715933 roo 7 8381 2.5 3.0 2.8 1.8 8399 chr2R 12707534 intron CG42663 + chr2R 12711734 intron CG42663 + chr2R 12715933 intron CG42663 + chr2R_7_12710001 chr2R_12710001 RAL-177 914 chr2R 12728852 12728906 chr2R 12728975 12729024 15 119 0.0 4.0 2.0 5.0 172 chr2R 12728852 intron CG42663 + chr2R 12728938 intron CG42663 + chr2R 12729024 intron CG42663 + chr2R_15_12725001 chr2R_12725001 RAL-177 915 chr2R 12789291 12789325 chr2R 12797664 12797708 roo 5 8369 4.0 3.0 3.5 1.1 8417 chr2R 12789291 intron,3` UTR sca +,CR45137 - chr2R 12793500 intron,intron sca +,CR45137 - chr2R 12797708 intron,3` UTR sca +,CR45137 - chr2R_5_12790001 chr2R_12790001 RAL-177 916 chr2R 12819428 12819466 chr2R 12824521 12824559 jockey 12 5092 6.5 9.0 7.8 1.4 5131 chr2R 12819428 intergenic not near genes chr2R 12821994 intergenic not near genes chr2R 12824559 intergenic not near genes chr2R_12_12820001 chr2R_12820001 RAL-177 917 chr2R 12897458 12897486 chr2R 12897569 12897597 17 109 5.0 7.0 6.0 2.4 139 chr2R 12897458 intron vg + chr2R 12897528 intron vg + chr2R 12897597 intron vg + chr2R_17_12895001 chr2R_12895001 RAL-177 918 chr2R 12903192 12903247 chr2R 12903301 12903356 16 108 2.5 3.5 3.0 4.0 164 chr2R 12903192 intergenic not near genes chr2R 12903274 intergenic not near genes chr2R 12903356 intergenic not near genes chr2R_16_12900001 chr2R_12900001 RAL-177 919 chr2R 12908463 12908498 chr2R 12908567 12908601 5 103 2.5 5.0 3.8 1.0 138 chr2R 12908463 intergenic not near genes chr2R 12908532 intergenic not near genes chr2R 12908601 intergenic not near genes chr2R_5_12905001 chr2R_12905001 RAL-177 920 chr2R 12952824 12952849 chr2R 12952928 12952953 6 102 0.0 4.5 2.2 1.9 129 chr2R 12952824 intergenic CG13321 + chr2R 12952888 intergenic CG13321 + chr2R 12952953 intergenic CG13321 + chr2R_6_12950001 chr2R_12950001 RAL-177 921 chr2R 13009871 13009923 chr2R 13009971 13010023 9 99 0.0 0.5 0.2 7.5 152 chr2R 13009871 intergenic not near genes chr2R 13009947 intergenic not near genes chr2R 13010023 intergenic not near genes chr2R_9_13005001 chr2R_13005001 RAL-177 922 chr2R 13017696 13017745 chr2R 13017806 13017855 15 109 6.0 0.0 3.0 3.8 159 chr2R 13017696 intergenic not near genes chr2R 13017776 intergenic not near genes chr2R 13017855 intergenic not near genes chr2R_15_13015001 chr2R_13015001 RAL-177 923 chr2R 13027723 13027731 chr2R 13027822 13027830 6 99 10.5 4.5 7.5 0.7 107 chr2R 13027723 intergenic not near genes chr2R 13027776 intergenic not near genes chr2R 13027830 intergenic not near genes chr2R_6_13025001 chr2R_13025001 RAL-177 924 chr2R 13035930 13035953 chr2R 13036051 13036074 5 121 3.0 0.0 1.5 2.0 144 chr2R 13035930 intergenic not near genes chr2R 13036002 intergenic not near genes chr2R 13036074 intergenic not near genes chr2R_5_13035001 chr2R_13035001 RAL-177 925 chr2R 13136823 13136863 chr2R 13141641 13141681 Doc 15 4817 8.0 4.5 6.2 2.1 4858 chr2R 13136823 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141681 intron Cap-G + chr2R_15_13135001 chr2R_13135001 RAL-177 926 chr2R 13167420 13167446 chr2R 13167534 13167560 11 113 9.5 0.0 4.8 1.9 140 chr2R 13167420 intron GLaz - chr2R 13167490 intron GLaz - chr2R 13167560 intron GLaz - chr2R_11_13165001 chr2R_13165001 RAL-177 927 chr2R 13261153 13261178 chr2R 13261253 13261293 18 112 2.0 9.5 5.8 2.6 140 chr2R 13261153 intron CG42319 + chr2R 13261223 intron CG42319 + chr2R 13261293 intron CG42319 + chr2R_18_13260001 chr2R_13260001 RAL-177 928 chr2R 13300083 13300107 chr2R 13300186 13300210 12 103 3.0 3.5 3.2 2.9 127 chr2R 13300083 intron CG17047 + chr2R 13300146 intron CG17047 + chr2R 13300210 exon CG17047 + chr2R_12_13300001 chr2R_13300001 RAL-177 929 chr2R 13431478 13431516 chr2R 13431577 13431615 6 99 1.0 4.0 2.5 1.7 137 chr2R 13431478 intron CG42321 - chr2R 13431546 intron CG42321 - chr2R 13431615 intron CG42321 - chr2R_6_13430001 chr2R_13430001 RAL-177 930 chr2R 13432915 13432967 chr2R 13433011 13433053 16 95 3.5 8.5 6.0 2.3 138 chr2R 13432915 intron CG42321 - chr2R 13432984 intron CG42321 - chr2R 13433053 intron,5` UTR CG42321 -,CG30065 + chr2R_16_13430001 chr2R_13430001 RAL-177 931 chr2R 13439114 13439132 chr2R 13439223 13439290 8 152 5.0 0.0 2.5 2.3 176 chr2R 13439114 intergenic CG42321 -,cnn - chr2R 13439202 intergenic cnn -,CG42321 - chr2R 13439290 intergenic cnn -,CG42321 - chr2R_8_13435001 chr2R_13435001 RAL-177 932 chr2R 13540378 13540421 chr2R 13540648 13540691 11 270 0.0 6.0 3.0 2.8 313 chr2R 13540378 intron CG6145 - chr2R 13540534 intron CG6145 - chr2R 13540691 intron CG6145 - chr2R_11_13540001 chr2R_13540001 RAL-177 933 chr2R 13547063 13547106 chr2R 13547278 13547321 14 214 4.5 6.5 5.5 2.2 258 chr2R 13547063 intron CG6145 - chr2R 13547192 intron CG6145 - chr2R 13547321 intron CG6145 - chr2R_14_13545001 chr2R_13545001 RAL-177 934 chr2R 13554755 13554774 chr2R 13554853 13554879 6 104 0.0 8.0 4.0 1.2 124 chr2R 13554755 intron Roe1 + chr2R 13554817 intron Roe1 + chr2R 13554879 intron Roe1 + chr2R_6_13550001 chr2R_13550001 RAL-177 935 chr2R 13566241 13566274 chr2R 13566341 13566374 16 100 4.5 0.0 2.2 5.0 133 chr2R 13566241 intergenic not near genes chr2R 13566308 intergenic not near genes chr2R 13566374 intergenic not near genes chr2R_16_13565001 chr2R_13565001 RAL-177 936 chr2R 13577411 13577454 chr2R 13577508 13577551 8 93 2.5 4.5 3.5 1.8 140 chr2R 13577411 5` UTR CR44365 + chr2R 13577481 5` UTR CR44365 + chr2R 13577551 intergenic CR44365 +,CR44366 + chr2R_8_13575001 chr2R_13575001 RAL-177 937 chr2R 13580489 13580525 chr2R 13580848 13580895 jockey 8 366 0.5 3.5 2.0 2.7 406 chr2R 13580489 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580895 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_8_13580001 chr2R_13580001 RAL-177 938 chr2R 13657394 13657423 chr2R 13657495 13657523 8 99 3.0 3.0 3.0 2.0 129 chr2R 13657394 intron fas + chr2R 13657458 intron fas + chr2R 13657523 intron fas + chr2R_8_13655001 chr2R_13655001 RAL-177 939 chr2R 13663593 13663614 chr2R 13663686 13663703 6 93 6.0 4.5 5.2 1.0 110 chr2R 13663593 intron,5` UTR fas +,CG6209 - chr2R 13663648 intron fas + chr2R 13663703 intron fas + chr2R_6_13660001 chr2R_13660001 RAL-177 940 chr2R 13663615 13663636 chr2R 13663682 13663734 4 83 1.5 4.5 3.0 1.0 119 chr2R 13663615 intron fas + chr2R 13663674 intron fas + chr2R 13663734 intron fas + chr2R_4_13660001 chr2R_13660001 RAL-177 941 chr2R 13709834 13709852 chr2R 13709947 13709965 7 113 3.5 11.5 7.5 0.8 131 chr2R 13709834 intron fas + chr2R 13709900 intron fas + chr2R 13709965 intron fas + chr2R_7_13705001 chr2R_13705001 RAL-177 942 chr2R 13728120 13728159 chr2R 13735797 13735836 opus 16 7677 5.5 4.0 4.8 2.8 7716 chr2R 13728120 intron fas + chr2R 13731978 intron fas + chr2R 13735836 intron fas + chr2R_16_13730001 chr2R_13730001 RAL-177 943 chr2R 13749486 13749523 chr2R 13749595 13749631 11 108 6.5 3.5 5.0 1.8 145 chr2R 13749486 intergenic fas + chr2R 13749558 intergenic fas + chr2R 13749631 intergenic fas + chr2R_11_13745001 chr2R_13745001 RAL-177 944 chr2R 13768971 13769009 chr2R 13769090 13769121 9 115 6.0 4.0 5.0 1.5 150 chr2R 13768971 intergenic not near genes chr2R 13769046 intergenic not near genes chr2R 13769121 intergenic not near genes chr2R_9_13765001 chr2R_13765001 RAL-177 945 chr2R 13770514 13770526 chr2R 13770624 13770636 5 110 0.0 12.0 6.0 0.7 122 chr2R 13770514 intron Cpr50Ca + chr2R 13770575 intron Cpr50Ca + chr2R 13770636 intron Cpr50Ca + chr2R_5_13770001 chr2R_13770001 RAL-177 946 chr2R 13817642 13817689 chr2R 13817741 13817791 8 102 6.0 0.0 3.0 2.0 149 chr2R 13817642 intron stj + chr2R 13817716 intron stj + chr2R 13817791 intron stj + chr2R_8_13815001 chr2R_13815001 RAL-177 947 chr2R 13905582 13905635 chr2R 13907584 13907624 Rt1a 14 1996 6.0 4.5 5.2 2.3 2042 chr2R 13905582 intron shot - chr2R 13906603 intron shot - chr2R 13907624 intron shot - chr2R_14_13905001 chr2R_13905001 RAL-177 948 chr2R 13924450 13924460 chr2R 13924586 13924596 4 136 9.5 2.5 6.0 0.6 146 chr2R 13924450 intron shot - chr2R 13924523 intron shot - chr2R 13924596 intron shot - chr2R_4_13920001 chr2R_13920001 RAL-177 949 chr2R 13965726 13965779 chr2R 13966166 13966219 13 438 3.5 5.0 4.2 2.5 493 chr2R 13965726 intron Cp1 + chr2R 13965972 intron Cp1 + chr2R 13966219 intron Cp1 + chr2R_13_13965001 chr2R_13965001 RAL-177 950 chr2R 14018146 14018158 chr2R 14018250 14018262 7 104 14.0 5.0 9.5 0.7 116 chr2R 14018146 intron mam + chr2R 14018204 intron mam + chr2R 14018262 intron mam + chr2R_7_14015001 chr2R_14015001 RAL-177 951 chr2R 14018159 14018181 chr2R 14018245 14018285 8 102 7.5 4.5 6.0 1.1 126 chr2R 14018159 intron mam + chr2R 14018222 intron mam + chr2R 14018285 intron mam + chr2R_8_14015001 chr2R_14015001 RAL-177 952 chr2R 14283429 14283443 chr2R 14283919 14283933 7 489 2.0 2.5 2.2 2.2 504 chr2R 14283429 intron Ih + chr2R 14283681 intron Ih + chr2R 14283933 intron Ih + chr2R_7_14280001 chr2R_14280001 RAL-177 953 chr2R 14285027 14285049 chr2R 14285144 14285166 10 117 5.5 7.0 6.2 1.4 139 chr2R 14285027 intron Ih + chr2R 14285096 intron Ih + chr2R 14285166 intron Ih + chr2R_10_14285001 chr2R_14285001 RAL-177 954 chr2R 14342197 14342245 chr2R 14342293 14342316 7 92 1.0 2.5 1.8 2.5 119 chr2R 14342197 intron Shroom + chr2R 14342256 intron Shroom + chr2R 14342316 intron Shroom + chr2R_7_14340001 chr2R_14340001 RAL-177 955 chr2R 14393865 14393894 chr2R 14393949 14393999 9 96 6.0 1.0 3.5 2.0 134 chr2R 14393865 intergenic not near genes chr2R 14393932 intergenic not near genes chr2R 14393999 intergenic not near genes chr2R_9_14390001 chr2R_14390001 RAL-177 956 chr2R 14394208 14394254 chr2R 14399017 14399032 Doc 10 4805 3.0 5.0 4.0 2.0 4824 chr2R 14394208 intergenic not near genes chr2R 14396620 intergenic not near genes chr2R 14399032 intergenic not near genes chr2R_10_14395001 chr2R_14395001 RAL-177 957 chr2R 14400503 14400552 chr2R 14400602 14400640 31 98 5.5 6.5 6.0 4.4 137 chr2R 14400503 intergenic not near genes chr2R 14400572 intergenic not near genes chr2R 14400640 intergenic not near genes chr2R_31_14400001 chr2R_14400001 RAL-177 958 chr2R 14467287 14467323 chr2R 14476465 14476475 roo 9 9175 3.0 1.5 2.2 2.8 9188 chr2R 14467287 intergenic not near genes chr2R 14471881 intergenic not near genes chr2R 14476475 5` UTR CR44462 + chr2R_9_14470001 chr2R_14470001 RAL-177 959 chr2R 14489200 14489246 chr2R 14489314 14489342 13 111 1.0 4.5 2.8 3.4 142 chr2R 14489200 intron L + chr2R 14489271 intron L + chr2R 14489342 intron L + chr2R_13_14485001 chr2R_14485001 RAL-177 960 chr2R 14497371 14497416 chr2R 14498557 14498602 1360 25 1185 3.0 4.5 3.8 5.2 1231 chr2R 14497371 3` UTR Cpsf160 - chr2R 14497986 intron Cpsf160 - chr2R 14498602 3` UTR Cpsf160 - chr2R_25_14495001 chr2R_14495001 RAL-177 961 chr2R 14514465 14514494 chr2R 14514578 14514623 17 113 6.5 5.5 6.0 2.4 158 chr2R 14514465 intron,intron Cpr51A -,CG30197 + chr2R 14514544 intron,intron Cpr51A -,CG30197 + chr2R 14514623 intron,intron Cpr51A -,CG30197 + chr2R_17_14510001 chr2R_14510001 RAL-177 962 chr2R 14530345 14530380 chr2R 14530452 14530489 9 109 6.5 4.0 5.2 1.5 144 chr2R 14530345 intron ttv + chr2R 14530417 intron ttv + chr2R 14530489 intron ttv + chr2R_9_14530001 chr2R_14530001 RAL-177 963 chr2R 14530735 14530772 chr2R 14530837 14530874 10 100 2.5 9.5 6.0 1.4 139 chr2R 14530735 intron ttv + chr2R 14530804 intron ttv + chr2R 14530874 intron ttv + chr2R_10_14530001 chr2R_14530001 RAL-177 964 chr2R 14565541 14565590 chr2R 14565638 14565687 17 96 6.5 2.5 4.5 3.1 146 chr2R 14565541 intron ttv + chr2R 14565614 intron ttv + chr2R 14565687 intron ttv + chr2R_17_14565001 chr2R_14565001 RAL-177 965 chr2R 14566427 14566479 chr2R 14566531 14566586 17 103 3.5 1.5 2.5 4.9 159 chr2R 14566427 intron ttv + chr2R 14566506 intron ttv + chr2R 14566586 intron ttv + chr2R_17_14565001 chr2R_14565001 RAL-177 966 chr2R 14710644 14710694 chr2R 14710770 14710805 19 123 5.5 4.0 4.8 3.3 161 chr2R 14710644 intron mspo - chr2R 14710724 intron mspo - chr2R 14710805 intron mspo - chr2R_19_14710001 chr2R_14710001 RAL-177 967 chr2R 14729949 14729992 chr2R 14730042 14730096 13 89 3.5 3.0 3.2 3.1 147 chr2R 14729949 intergenic not near genes chr2R 14730022 intergenic not near genes chr2R 14730096 intergenic not near genes chr2R_13_14730001 chr2R_14730001 RAL-177 968 chr2R 14737618 14737628 chr2R 14737722 14737732 4 104 13.5 11.0 12.2 0.3 114 chr2R 14737618 3` UTR CR43428 - chr2R 14737675 3` UTR CR43428 - chr2R 14737732 3` UTR CR43428 - chr2R_4_14735001 chr2R_14735001 RAL-177 969 chr2R 14746495 14746534 chr2R 14746634 14746673 6 137 3.0 5.0 4.0 1.2 178 chr2R 14746495 3` UTR Dro + chr2R 14746584 3` UTR Dro + chr2R 14746673 3` UTR Dro + chr2R_6_14745001 chr2R_14745001 RAL-177 970 chr2R 14796320 14796355 chr2R 14796437 14796462 14 116 7.0 4.5 5.8 2.1 142 chr2R 14796320 intron kn - chr2R 14796391 intron kn - chr2R 14796462 intron kn - chr2R_14_14795001 chr2R_14795001 RAL-177 971 chr2R 14826379 14826386 chr2R 14826503 14826510 4 124 8.5 3.0 5.8 0.6 131 chr2R 14826379 intergenic not near genes chr2R 14826444 intergenic not near genes chr2R 14826510 intergenic not near genes chr2R_4_14825001 chr2R_14825001 RAL-177 972 chr2R 14855010 14855060 chr2R 14855122 14855155 8 110 3.0 1.0 2.0 2.7 145 chr2R 14855010 5` UTR Ciao1 - chr2R 14855082 intergenic Ciao1 -,HPS1 + chr2R 14855155 intergenic Ciao1 -,HPS1 + chr2R_8_14855001 chr2R_14855001 RAL-177 973 chr2R 14873671 14873718 chr2R 14875209 14875256 13 1537 7.5 1.0 4.2 2.5 1585 chr2R 14873671 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874464 exon Cyp6a17 + chr2R 14875256 exon Cyp6a17 + chr2R_13_14870001 chr2R_14870001 RAL-177 974 chr2R 14875230 14875264 chr2R 14875657 14875696 15 429 1.5 6.5 4.0 3.0 466 chr2R 14875230 exon Cyp6a17 + chr2R 14875463 exon Cyp6a17 + chr2R 14875696 3` UTR Cyp6a17 + chr2R_15_14875001 chr2R_14875001 RAL-177 975 chr2R 14889194 14889212 chr2R 14897822 14897840 Max-element 5 8628 12.5 0.0 6.2 0.7 8646 chr2R 14889194 intergenic Cyp6a8 - chr2R 14893517 intergenic not near genes chr2R 14897840 intergenic not near genes chr2R_5_14890001 chr2R_14890001 RAL-177 976 chr2R 14911682 14911727 chr2R 14911825 14911870 12 142 7.0 3.0 5.0 2.0 188 chr2R 14911682 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911870 intron CG10249 - chr2R_12_14910001 chr2R_14910001 RAL-177 977 chr2R 14916540 14916558 chr2R 14916640 14916658 7 100 3.0 5.0 4.0 1.4 118 chr2R 14916540 intron CG10249 - chr2R 14916599 intron CG10249 - chr2R 14916658 intron CG10249 - chr2R_7_14915001 chr2R_14915001 RAL-177 978 chr2R 14919026 14919149 chr2R 14919126 14919278 14 107 0.0 0.0 0.0 14.0 252 chr2R 14919026 intron CG10249 - chr2R 14919152 intron CG10249 - chr2R 14919278 intron CG10249 - chr2R_14_14915001 chr2R_14915001 RAL-177 979 chr2R 14922122 14922173 chr2R 14922218 14922254 16 94 5.0 2.0 3.5 3.6 132 chr2R 14922122 intron CG10249 - chr2R 14922188 intron CG10249 - chr2R 14922254 intron CG10249 - chr2R_16_14920001 chr2R_14920001 RAL-177 980 chr2R 14934434 14934452 chr2R 14934542 14934560 8 108 6.0 0.0 3.0 2.0 126 chr2R 14934434 intron CG10253 - chr2R 14934497 intron CG10253 - chr2R 14934560 intron CG10253 - chr2R_8_14930001 chr2R_14930001 RAL-177 981 chr2R 14998498 14998510 chr2R 14998658 14998670 6 160 1.5 7.0 4.2 1.2 172 chr2R 14998498 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998670 intergenic not near genes chr2R_6_14995001 chr2R_14995001 RAL-177 982 chr2R 15004709 15004729 chr2R 15005058 15005078 jockey 14 349 7.5 10.0 8.8 1.4 369 chr2R 15004709 intergenic not near genes chr2R 15004894 intergenic not near genes chr2R 15005078 intergenic not near genes chr2R_14_15000001 chr2R_15000001 RAL-177 983 chr2R 15004731 15004749 chr2R 15005054 15005098 jockey 4 342 5.0 9.5 7.2 0.5 367 chr2R 15004731 intergenic not near genes chr2R 15004914 intergenic not near genes chr2R 15005098 intergenic not near genes chr2R_4_15000001 chr2R_15000001 RAL-177 984 chr2R 15015452 15015484 chr2R 15022884 15022928 mdg1 15 7441 4.0 3.0 3.5 3.3 7476 chr2R 15015452 intron hbs + chr2R 15019190 intron hbs + chr2R 15022928 intron hbs + chr2R_15_15015001 chr2R_15015001 RAL-177 985 chr2R 15051071 15051110 chr2R 15051166 15051212 18 100 4.0 4.0 4.0 3.6 141 chr2R 15051071 intergenic not near genes chr2R 15051142 intergenic not near genes chr2R 15051212 intergenic not near genes chr2R_18_15050001 chr2R_15050001 RAL-177 986 chr2R 15073105 15073118 chr2R 15073208 15073221 7 103 10.0 7.0 8.5 0.7 116 chr2R 15073105 intergenic not near genes chr2R 15073163 intergenic not near genes chr2R 15073221 intergenic not near genes chr2R_7_15070001 chr2R_15070001 RAL-177 987 chr2R 15084962 15084999 chr2R 15092031 15092068 297 18 7068 5.5 5.5 5.5 2.8 7106 chr2R 15084962 intergenic not near genes chr2R 15088515 intergenic not near genes chr2R 15092068 5` UTR CR44457 + chr2R_18_15085001 chr2R_15085001 RAL-177 988 chr2R 15119298 15119342 chr2R 15127799 15127829 Tirant 17 8496 7.5 3.0 5.2 2.7 8531 chr2R 15119298 intron chn + chr2R 15123564 intron chn + chr2R 15127829 intron chn + chr2R_17_15120001 chr2R_15120001 RAL-177 989 chr2R 15133464 15133517 chr2R 15133563 15133575 17 96 3.5 4.0 3.8 3.5 111 chr2R 15133464 intron chn + chr2R 15133520 intron chn + chr2R 15133575 intron chn + chr2R_17_15130001 chr2R_15130001 RAL-177 990 chr2R 15137947 15138000 chr2R 15138047 15138102 16 98 5.5 1.5 3.5 3.6 155 chr2R 15137947 intron chn + chr2R 15138024 intron chn + chr2R 15138102 5` UTR chn + chr2R_16_15135001 chr2R_15135001 RAL-177 991 chr2R 15183019 15183067 chr2R 15183128 15183178 13 108 6.0 1.5 3.8 2.7 159 chr2R 15183019 intron igl + chr2R 15183098 intron igl + chr2R 15183178 intron igl + chr2R_13_15180001 chr2R_15180001 RAL-177 992 chr2R 15230355 15230370 chr2R 15230672 15230677 5 312 39.0 0.5 19.8 0.2 322 chr2R 15230355 intron,5` UTR Fs -,CR44370 + chr2R 15230516 intron,5` UTR Fs -,CR44370 + chr2R 15230677 intron,5` UTR Fs -,CR44370 + chr2R_5_15230001 chr2R_15230001 RAL-177 993 chr2R 15259047 15259085 chr2R 15259151 15259189 13 104 7.5 5.5 6.5 1.7 142 chr2R 15259047 intron ItgalphaPS4 + chr2R 15259118 intron ItgalphaPS4 + chr2R 15259189 intron ItgalphaPS4 + chr2R_13_15255001 chr2R_15255001 RAL-177 994 chr2R 15296141 15296172 chr2R 15296244 15296275 13 100 3.0 5.5 4.2 2.5 134 chr2R 15296141 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296275 intron Trpm - chr2R_13_15295001 chr2R_15295001 RAL-177 995 chr2R 15396304 15396351 chr2R 15396516 15396563 23 209 1.5 6.5 4.0 4.6 259 chr2R 15396304 intergenic not near genes chr2R 15396434 intergenic not near genes chr2R 15396563 intergenic not near genes chr2R_23_15395001 chr2R_15395001 RAL-177 996 chr2R 15410760 15410786 chr2R 15410972 15410998 4 207 10.0 2.5 6.2 0.6 238 chr2R 15410760 intron CG43729 + chr2R 15410879 intron CG43729 + chr2R 15410998 intron CG43729 + chr2R_4_15410001 chr2R_15410001 RAL-177 997 chr2R 15430132 15430178 chr2R 15430290 15430336 18 157 3.5 5.5 4.5 3.3 204 chr2R 15430132 intron CG43729 + chr2R 15430234 intron CG43729 + chr2R 15430336 intron CG43729 + chr2R_18_15430001 chr2R_15430001 RAL-177 998 chr2R 15606113 15606130 chr2R 15606210 15606227 10 96 8.0 3.5 5.8 1.5 114 chr2R 15606113 intergenic not near genes chr2R 15606170 intergenic not near genes chr2R 15606227 intergenic not near genes chr2R_10_15605001 chr2R_15605001 RAL-177 999 chr2R 15656042 15656068 chr2R 15656153 15656179 4 111 0.0 8.0 4.0 0.8 137 chr2R 15656042 intron CG42524 + chr2R 15656110 intron CG42524 + chr2R 15656179 intron CG42524 + chr2R_4_15655001 chr2R_15655001 RAL-177 1000 chr2R 15685357 15685393 chr2R 15685473 15685516 10 122 3.5 2.5 3.0 2.5 159 chr2R 15685357 intron,exon Ranbp11 +,CG30082 - chr2R 15685436 intron,intron Ranbp11 +,CG30082 - chr2R 15685516 intron,intron Ranbp11 +,CG30082 - chr2R_10_15685001 chr2R_15685001 RAL-177 1001 chr2R 15700230 15700259 chr2R 15700365 15700394 7 134 4.5 7.0 5.8 1.0 164 chr2R 15700230 intron,5` UTR CG30080 -,CG42662 - chr2R 15700312 intron,5` UTR CG30080 -,CG42662 - chr2R 15700394 intron,5` UTR CG30080 -,CG42662 - chr2R_7_15700001 chr2R_15700001 RAL-177 1002 chr2R 15720749 15720796 chr2R 15720865 15720912 18 116 5.0 3.0 4.0 3.6 163 chr2R 15720749 intergenic not near genes chr2R 15720830 intergenic not near genes chr2R 15720912 intergenic not near genes chr2R_18_15720001 chr2R_15720001 RAL-177 1003 chr2R 15833505 15833550 chr2R 15833612 15833651 10 102 8.0 3.0 5.5 1.5 146 chr2R 15833505 intron,intron tun +,Poxn - chr2R 15833578 intron,intron tun +,Poxn - chr2R 15833651 intron,intron tun +,Poxn - chr2R_10_15830001 chr2R_15830001 RAL-177 1004 chr2R 15869313 15869369 chr2R 15869413 15869469 14 100 2.5 3.5 3.0 3.5 156 chr2R 15869313 intergenic Rif1 -,sli - chr2R 15869391 intergenic sli -,Rif1 - chr2R 15869469 intergenic sli -,Rif1 - chr2R_14_15865001 chr2R_15865001 RAL-177 1005 chr2R 15898883 15898909 chr2R 15898980 15899022 6 103 9.5 5.0 7.2 0.7 139 chr2R 15898883 intron sli - chr2R 15898952 intron sli - chr2R 15899022 intron sli - chr2R_6_15895001 chr2R_15895001 RAL-177 1006 chr2R 15902873 15902906 chr2R 15902956 15903002 13 92 3.5 2.0 2.8 3.4 129 chr2R 15902873 intron sli - chr2R 15902938 intron sli - chr2R 15903002 intron sli - chr2R_13_15900001 chr2R_15900001 RAL-177 1007 chr2R 15903184 15903225 chr2R 15903281 15903318 4 92 5.5 3.0 4.2 0.8 134 chr2R 15903184 intron sli - chr2R 15903251 intron sli - chr2R 15903318 intron sli - chr2R_4_15900001 chr2R_15900001 RAL-177 1008 chr2R 16018048 16018075 chr2R 16018144 16018146 5 91 7.0 3.0 5.0 0.8 98 chr2R 16018048 intron CG8399 + chr2R 16018097 intron CG8399 + chr2R 16018146 intron CG8399 + chr2R_5_16015001 chr2R_16015001 RAL-177 1009 chr2R 16018077 16018091 chr2R 16018143 16018187 7 87 4.0 3.0 3.5 1.6 110 chr2R 16018077 intron CG8399 + chr2R 16018132 intron CG8399 + chr2R 16018187 intron CG8399 + chr2R_7_16015001 chr2R_16015001 RAL-177 1010 chr2R 16248606 16248656 chr2R 16248712 16248762 19 104 3.0 2.5 2.8 5.0 156 chr2R 16248606 intron CngA - chr2R 16248684 intron CngA - chr2R 16248762 intron CngA - chr2R_19_16245001 chr2R_16245001 RAL-177 1011 chr2R 16289586 16289607 chr2R 16289700 16289721 7 114 7.5 5.5 6.5 0.9 135 chr2R 16289586 intron,exon CR43730 -,JhI-26 + chr2R 16289654 intron,intron CR43730 -,JhI-26 + chr2R 16289721 intron,intron CR43730 -,JhI-26 + chr2R_7_16285001 chr2R_16285001 RAL-177 1012 chr2R 16352850 16352867 chr2R 16352953 16352970 9 103 3.5 4.5 4.0 1.8 120 chr2R 16352850 intergenic not near genes chr2R 16352910 intergenic not near genes chr2R 16352970 intergenic not near genes chr2R_9_16350001 chr2R_16350001 RAL-177 1013 chr2R 16539618 16539632 chr2R 16544844 16544858 copia 9 5225 5.0 0.5 2.8 2.4 5240 chr2R 16539618 intergenic not near genes chr2R 16542238 intergenic not near genes chr2R 16544858 intergenic not near genes chr2R_9_16540001 chr2R_16540001 RAL-177 1014 chr2R 16544849 16544868 chr2R 16544954 16544973 11 105 0.0 0.0 0.0 11.0 124 chr2R 16544849 intergenic not near genes chr2R 16544911 intergenic not near genes chr2R 16544973 intergenic not near genes chr2R_11_16540001 chr2R_16540001 RAL-177 1015 chr2R 16546308 16546342 chr2R 16546451 16546484 10 140 2.5 7.0 4.8 1.7 176 chr2R 16546308 intergenic not near genes chr2R 16546396 intergenic not near genes chr2R 16546484 intergenic not near genes chr2R_10_16545001 chr2R_16545001 RAL-177 1016 chr2R 16571853 16571906 chr2R 16571968 16572021 20 113 2.5 4.0 3.2 4.8 168 chr2R 16571853 intergenic CG4927 + chr2R 16571937 intergenic CG4927 + chr2R 16572021 intergenic CG4927 + chr2R_20_16570001 chr2R_16570001 RAL-177 1017 chr2R 16617056 16617085 chr2R 16617150 16617184 8 97 6.0 6.0 6.0 1.1 128 chr2R 16617056 intron CG5065 + chr2R 16617120 intron CG5065 + chr2R 16617184 intron CG5065 + chr2R_8_16615001 chr2R_16615001 RAL-177 1018 chr2R 16689150 16689154 chr2R 16689481 16689503 5 341 5.0 2.0 3.5 1.1 353 chr2R 16689150 intron CG30463 - chr2R 16689326 intron CG30463 - chr2R 16689503 intron CG30463 - chr2R_5_16685001 chr2R_16685001 RAL-177 1019 chr2R 16705078 16705098 chr2R 16705184 16705211 12 111 7.0 7.5 7.2 1.5 133 chr2R 16705078 intron CG30463 - chr2R 16705144 intron CG30463 - chr2R 16705211 intron CG30463 - chr2R_12_16705001 chr2R_16705001 RAL-177 1020 chr2R 16705100 16705108 chr2R 16705180 16705221 4 104 5.5 5.5 5.5 0.6 121 chr2R 16705100 intron CG30463 - chr2R 16705160 intron CG30463 - chr2R 16705221 intron CG30463 - chr2R_4_16705001 chr2R_16705001 RAL-177 1021 chr2R 16737126 16737165 chr2R 16737238 16737275 5 115 3.5 3.0 3.2 1.2 149 chr2R 16737126 3` UTR CG43104 - chr2R 16737200 3` UTR CG43104 - chr2R 16737275 exon CG43104 - chr2R_5_16735001 chr2R_16735001 RAL-177 1022 chr2R 16775647 16775654 chr2R 16775934 16775941 4 287 6.0 11.0 8.5 0.4 294 chr2R 16775647 3` UTR Arp53D + chr2R 16775794 intergenic Arp53D + chr2R 16775941 intergenic Arp53D + chr2R_4_16775001 chr2R_16775001 RAL-177 1023 chr2R 16775656 16775674 chr2R 16775931 16775961 8 284 3.5 10.5 7.0 1.0 305 chr2R 16775656 3` UTR Arp53D + chr2R 16775808 intergenic Arp53D + chr2R 16775961 intergenic Arp53D + chr2R_8_16775001 chr2R_16775001 RAL-177 1024 chr2R 16787458 16787498 chr2R 16787560 16787600 12 102 6.5 5.0 5.8 1.8 142 chr2R 16787458 intron CG5522 + chr2R 16787529 intron CG5522 + chr2R 16787600 intron CG5522 + chr2R_12_16785001 chr2R_16785001 RAL-177 1025 chr2R 16885782 16885826 chr2R 16885880 16885903 12 88 4.5 9.0 6.8 1.5 121 chr2R 16885782 intron CG8910 - chr2R 16885842 intron CG8910 - chr2R 16885903 intron CG8910 - chr2R_12_16885001 chr2R_16885001 RAL-177 1026 chr2R 16893759 16893805 chr2R 16893862 16893903 16 99 5.5 6.0 5.8 2.4 144 chr2R 16893759 intron CG8910 - chr2R 16893831 intron CG8910 - chr2R 16893903 intron CG8910 - chr2R_16_16890001 chr2R_16890001 RAL-177 1027 chr2R 16930608 16930626 chr2R 16930706 16930724 4 96 0.0 7.5 3.8 0.8 116 chr2R 16930608 intron Pkc53E + chr2R 16930666 intron Pkc53E + chr2R 16930724 intron Pkc53E + chr2R_4_16930001 chr2R_16930001 RAL-177 1028 chr2R 16933311 16933360 chr2R 16933430 16933479 16 119 2.0 4.0 3.0 4.0 168 chr2R 16933311 intron Pkc53E + chr2R 16933395 intron Pkc53E + chr2R 16933479 intron Pkc53E + chr2R_16_16930001 chr2R_16930001 RAL-177 1029 chr2R 17132836 17132860 chr2R 17132956 17132980 10 119 4.0 5.0 4.5 1.8 144 chr2R 17132836 intergenic not near genes chr2R 17132908 intergenic not near genes chr2R 17132980 intergenic Acp54A1 + chr2R_10_17130001 chr2R_17130001 RAL-177 1030 chr2R 17147230 17147263 chr2R 17152281 17152304 jockey 10 5050 6.5 6.0 6.2 1.4 5074 chr2R 17147230 intergenic not near genes chr2R 17149767 intergenic not near genes chr2R 17152304 intergenic not near genes chr2R_10_17145001 chr2R_17145001 RAL-177 1031 chr2R 17161334 17161352 chr2R 17161561 17161579 4 227 6.0 0.0 3.0 1.0 245 chr2R 17161334 intergenic not near genes chr2R 17161456 intergenic not near genes chr2R 17161579 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-177 1032 chr2R 17176353 17176382 chr2R 17182563 17182592 diver 15 6209 0.0 8.0 4.0 3.0 6239 chr2R 17176353 intergenic not near genes chr2R 17179472 intergenic not near genes chr2R 17182592 intergenic not near genes chr2R_15_17175001 chr2R_17175001 RAL-177 1033 chr2R 17188711 17188743 chr2R 17188819 17188851 13 108 3.5 3.5 3.5 2.9 140 chr2R 17188711 intergenic CR44389 - chr2R 17188781 intergenic CR44389 - chr2R 17188851 3` UTR CR44389 - chr2R_13_17185001 chr2R_17185001 RAL-177 1034 chr2R 17236494 17236541 chr2R 17241718 17241740 copia 12 5220 1.5 5.0 3.2 2.9 5246 chr2R 17236494 intron mbl + chr2R 17239117 intron mbl + chr2R 17241740 intron mbl + chr2R_12_17235001 chr2R_17235001 RAL-177 1035 chr2R 17419921 17419962 chr2R 17420025 17420060 5 101 0.0 4.0 2.0 1.7 139 chr2R 17419921 5` UTR cnk - chr2R 17419990 5` UTR cnk - chr2R 17420060 intergenic cnk -,l(2)k01209 + chr2R_5_17415001 chr2R_17415001 RAL-177 1036 chr2R 17458985 17459034 chr2R 17459090 17459139 15 105 7.0 9.0 8.0 1.7 154 chr2R 17458985 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459139 intron CG14478 + chr2R_15_17455001 chr2R_17455001 RAL-177 1037 chr2R 17459156 17459206 chr2R 17459410 17459460 22 253 6.0 4.5 5.2 3.5 304 chr2R 17459156 intron CG14478 + chr2R 17459308 intron CG14478 + chr2R 17459460 intron CG14478 + chr2R_22_17455001 chr2R_17455001 RAL-177 1038 chr2R 17470307 17470354 chr2R 17470402 17470453 25 99 5.0 3.5 4.2 4.8 146 chr2R 17470307 intron qkr54B + chr2R 17470380 intron qkr54B + chr2R 17470453 intron qkr54B + chr2R_25_17470001 chr2R_17470001 RAL-177 1039 chr2R 17485921 17485949 chr2R 17490701 17490737 F-element 8 4787 4.5 5.5 5.0 1.3 4816 chr2R 17485921 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488329 intron NT5E-2 + chr2R 17490737 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 RAL-177 1040 chr2R 17637816 17637840 chr2R 17637916 17637940 7 100 3.0 6.0 4.5 1.3 124 chr2R 17637816 intron CG10936 - chr2R 17637878 intron CG10936 - chr2R 17637940 intron CG10936 - chr2R_7_17635001 chr2R_17635001 RAL-177 1041 chr2R 17661535 17661583 chr2R 17661635 17661673 8 93 3.5 2.0 2.8 2.1 138 chr2R 17661535 intron CCHa1-R - chr2R 17661604 intron CCHa1-R - chr2R 17661673 intron CCHa1-R - chr2R_8_17660001 chr2R_17660001 RAL-177 1042 chr2R 17708374 17708423 chr2R 17708475 17708524 26 101 4.5 6.5 5.5 4.0 150 chr2R 17708374 intron CG6424 - chr2R 17708449 intron CG6424 - chr2R 17708524 intron CG6424 - chr2R_26_17705001 chr2R_17705001 RAL-177 1043 chr2R 17709968 17710008 chr2R 17710079 17710118 11 110 6.0 0.5 3.2 2.6 150 chr2R 17709968 intron CG6424 - chr2R 17710043 intron CG6424 - chr2R 17710118 intron CG6424 - chr2R_11_17710001 chr2R_17710001 RAL-177 1044 chr2R 17710073 17710116 chr2R 17710171 17710214 16 98 1.0 7.0 4.0 3.2 141 chr2R 17710073 intron CG6424 - chr2R 17710144 intron CG6424 - chr2R 17710214 intron CG6424 - chr2R_16_17710001 chr2R_17710001 RAL-177 1045 chr2R 17782342 17782394 chr2R 17783565 17783617 pogo 14 1221 3.5 5.5 4.5 2.5 1275 chr2R 17782342 intergenic CG33981 -,fab1 - chr2R 17782980 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_14_17780001 chr2R_17780001 RAL-177 1046 chr2R 17784008 17784047 chr2R 17784269 17784297 pogo 7 257 7.0 4.5 5.8 1.0 289 chr2R 17784008 intergenic mir-31a - chr2R 17784152 intergenic mir-31a - chr2R 17784297 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-177 1047 chr2R 17794764 17794783 chr2R 17794863 17794882 12 99 5.5 4.5 5.0 2.0 118 chr2R 17794764 intron Dhit + chr2R 17794823 intron Dhit + chr2R 17794882 intron Dhit + chr2R_12_17790001 chr2R_17790001 RAL-177 1048 chr2R 17828560 17828577 chr2R 17828663 17828680 9 103 4.0 0.0 2.0 3.0 120 chr2R 17828560 intron grh + chr2R 17828620 intron grh + chr2R 17828680 intron grh + chr2R_9_17825001 chr2R_17825001 RAL-177 1049 chr2R 17835025 17835060 chr2R 17835133 17835159 13 106 4.0 6.0 5.0 2.2 134 chr2R 17835025 intron grh + chr2R 17835092 intron grh + chr2R 17835159 intron grh + chr2R_13_17835001 chr2R_17835001 RAL-177 1050 chr2R 17918152 17918184 chr2R 17918237 17918281 7 89 6.5 1.5 4.0 1.4 129 chr2R 17918152 intron Elk + chr2R 17918216 intron Elk + chr2R 17918281 intron Elk + chr2R_7_17915001 chr2R_17915001 RAL-177 1051 chr2R 17921434 17921469 chr2R 17921536 17921568 11 100 4.0 7.0 5.5 1.7 134 chr2R 17921434 intron Elk + chr2R 17921501 intron Elk + chr2R 17921568 intron Elk + chr2R_11_17920001 chr2R_17920001 RAL-177 1052 chr2R 17982918 17982948 chr2R 17983012 17983041 20 103 5.0 3.0 4.0 4.0 123 chr2R 17982918 intron dpr13 - chr2R 17982980 intron dpr13 - chr2R 17983041 intron dpr13 - chr2R_20_17980001 chr2R_17980001 RAL-177 1053 chr2R 17997056 17997061 chr2R 17997184 17997189 4 128 28.5 10.5 19.5 0.2 133 chr2R 17997056 intron dpr13 - chr2R 17997122 intron dpr13 - chr2R 17997189 intron dpr13 - chr2R_4_17995001 chr2R_17995001 RAL-177 1054 chr2R 17997063 17997097 chr2R 17997181 17997215 10 121 26.0 11.5 18.8 0.5 152 chr2R 17997063 intron dpr13 - chr2R 17997139 intron dpr13 - chr2R 17997215 intron dpr13 - chr2R_10_17995001 chr2R_17995001 RAL-177 1055 chr2R 18045652 18045702 chr2R 18046024 18046074 jockey 16 372 5.5 9.5 7.5 1.9 422 chr2R 18045652 intergenic not near genes chr2R 18045863 intergenic not near genes chr2R 18046074 intergenic CG5767 - chr2R_16_18045001 chr2R_18045001 RAL-177 1056 chr2R 18089176 18089182 chr2R 18089308 18089313 5 132 2.0 3.0 2.5 1.4 137 chr2R 18089176 intron CG34386 + chr2R 18089244 intron CG34386 + chr2R 18089313 intron CG34386 + chr2R_5_18085001 chr2R_18085001 RAL-177 1057 chr2R 18111695 18111716 chr2R 18115570 18115578 F-element 9 3881 0.0 8.0 4.0 1.8 3883 chr2R 18111695 intergenic not near genes chr2R 18113636 intergenic not near genes chr2R 18115578 intergenic not near genes chr2R_9_18110001 chr2R_18110001 RAL-177 1058 chr2R 18255075 18255125 chr2R 18255190 18255220 11 105 2.0 2.5 2.2 3.4 145 chr2R 18255075 intergenic not near genes chr2R 18255148 intergenic not near genes chr2R 18255220 intergenic not near genes chr2R_11_18255001 chr2R_18255001 RAL-177 1059 chr2R 18308262 18308292 chr2R 18308388 18308418 10 126 3.0 1.5 2.2 3.1 156 chr2R 18308262 intron sbb - chr2R 18308340 intron sbb - chr2R 18308418 intron sbb - chr2R_10_18305001 chr2R_18305001 RAL-177 1060 chr2R 18358375 18358416 chr2R 18372606 18372648 roo 15 14231 6.5 4.0 5.2 2.4 14273 chr2R 18358375 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372648 intergenic not near genes chr2R_15_18365001 chr2R_18365001 RAL-177 1061 chr2R 18405768 18405785 chr2R 18405868 18405885 11 100 5.0 4.0 4.5 2.0 117 chr2R 18405768 intergenic GstE6 +,GstE5 + chr2R 18405826 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_11_18405001 chr2R_18405001 RAL-177 1062 chr2R 18477740 18477761 chr2R 18477842 18477851 10 100 0.0 6.0 3.0 2.5 111 chr2R 18477740 intron CG30116 - chr2R 18477796 intron CG30116 - chr2R 18477851 intron CG30116 - chr2R_10_18475001 chr2R_18475001 RAL-177 1063 chr2R 18575792 18575831 chr2R 18581985 18582039 3S18 15 6201 2.5 4.0 3.2 3.6 6247 chr2R 18575792 intron GEFmeso - chr2R 18578916 intron GEFmeso - chr2R 18582039 intron GEFmeso - chr2R_15_18575001 chr2R_18575001 RAL-177 1064 chr2R 18590847 18590898 chr2R 18600019 18600047 roo 7 9167 2.5 1.5 2.0 2.3 9200 chr2R 18590847 intron GEFmeso - chr2R 18595447 intron GEFmeso - chr2R 18600047 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 RAL-177 1065 chr2R 18676022 18676053 chr2R 18676118 18676153 14 98 5.5 3.5 4.5 2.5 131 chr2R 18676022 intergenic not near genes chr2R 18676088 intergenic not near genes chr2R 18676153 intergenic not near genes chr2R_14_18675001 chr2R_18675001 RAL-177 1066 chr2R 18678507 18678540 chr2R 18678647 18678655 11 134 2.5 0.5 1.5 4.4 148 chr2R 18678507 intergenic CG44434 -,CG44435 - chr2R 18678581 intergenic CG44434 -,CG44435 - chr2R 18678655 intergenic CG44434 -,CG44435 - chr2R_11_18675001 chr2R_18675001 RAL-177 1067 chr2R 18732328 18732371 chr2R 18732482 18732524 6 152 4.5 3.5 4.0 1.2 196 chr2R 18732328 intron Hs3st-A + chr2R 18732426 intron Hs3st-A + chr2R 18732524 intron Hs3st-A + chr2R_6_18730001 chr2R_18730001 RAL-177 1068 chr2R 18778594 18778604 chr2R 18778712 18778722 5 118 7.0 2.0 4.5 0.9 128 chr2R 18778594 intergenic not near genes chr2R 18778658 intergenic not near genes chr2R 18778722 intergenic not near genes chr2R_5_18775001 chr2R_18775001 RAL-177 1069 chr2R 18785904 18785932 chr2R 18786003 18786031 5 96 5.5 2.5 4.0 1.0 127 chr2R 18785904 intron CG15080 + chr2R 18785968 intron CG15080 + chr2R 18786031 intron CG15080 + chr2R_5_18785001 chr2R_18785001 RAL-177 1070 chr2R 18785937 18785945 chr2R 18786001 18786044 4 90 5.0 2.5 3.8 0.8 107 chr2R 18785937 intron CG15080 + chr2R 18785990 intron CG15080 + chr2R 18786044 intron CG15080 + chr2R_4_18785001 chr2R_18785001 RAL-177 1071 chr2R 18827714 18827721 chr2R 18827814 18827821 4 100 2.0 5.0 3.5 0.9 107 chr2R 18827714 intron CG15097 - chr2R 18827768 intron CG15097 - chr2R 18827821 intron CG15097 - chr2R_4_18825001 chr2R_18825001 RAL-177 1072 chr2R 18835876 18835891 chr2R 18835978 18835993 6 102 7.5 0.0 3.8 1.2 117 chr2R 18835876 intron CG15083 + chr2R 18835934 intron CG15083 + chr2R 18835993 intron CG15083 + chr2R_6_18835001 chr2R_18835001 RAL-177 1073 chr2R 18858256 18858264 chr2R 18860095 18860103 Bari1 5 1839 6.5 17.5 12.0 0.4 1847 chr2R 18858256 intergenic Jheh2 - chr2R 18859180 intergenic not near genes chr2R 18860103 intergenic Jheh3 - chr2R_5_18855001 chr2R_18855001 RAL-177 1074 chr2R 18862290 18862345 chr2R 18862397 18862485 14 115 0.5 0.0 0.2 11.7 195 chr2R 18862290 intergenic Jheh3 - chr2R 18862388 intergenic Jheh3 -,CG43069 + chr2R 18862485 intergenic CG43069 +,Jheh3 - chr2R_14_18860001 chr2R_18860001 RAL-177 1075 chr2R 18926493 18926530 chr2R 18926600 18926637 17 106 3.5 0.5 2.0 5.7 144 chr2R 18926493 intron sano + chr2R 18926565 intron sano + chr2R 18926637 intron sano + chr2R_17_18925001 chr2R_18925001 RAL-177 1076 chr2R 18953139 18953192 chr2R 18953246 18953299 28 105 2.5 4.5 3.5 6.2 160 chr2R 18953139 intron sano + chr2R 18953219 intron sano + chr2R 18953299 intron sano + chr2R_28_18950001 chr2R_18950001 RAL-177 1077 chr2R 18964900 18964953 chr2R 18964996 18965049 16 95 5.5 8.5 7.0 2.0 149 chr2R 18964900 intergenic not near genes chr2R 18964974 intergenic not near genes chr2R 18965049 intergenic not near genes chr2R_16_18960001 chr2R_18960001 RAL-177 1078 chr2R 19096495 19096535 chr2R 19096654 19096706 16 168 2.0 2.5 2.2 5.0 211 chr2R 19096495 exon 5-HT1A + chr2R 19096600 intron 5-HT1A + chr2R 19096706 intron 5-HT1A + chr2R_16_19095001 chr2R_19095001 RAL-177 1079 chr2R 19101719 19101763 chr2R 19101827 19101855 14 111 2.0 2.5 2.2 4.4 136 chr2R 19101719 intron 5-HT1A + chr2R 19101787 intron 5-HT1A + chr2R 19101855 intron 5-HT1A + chr2R_14_19100001 chr2R_19100001 RAL-177 1080 chr2R 19103390 19103429 chr2R 19103500 19103531 9 104 4.0 0.5 2.2 2.8 141 chr2R 19103390 intron 5-HT1A + chr2R 19103460 intron 5-HT1A + chr2R 19103531 intron 5-HT1A + chr2R_9_19100001 chr2R_19100001 RAL-177 1081 chr2R 19105159 19105164 chr2R 19105265 19105275 4 110 0.0 6.0 3.0 1.0 116 chr2R 19105159 intron 5-HT1A + chr2R 19105217 intron 5-HT1A + chr2R 19105275 intron 5-HT1A + chr2R_4_19105001 chr2R_19105001 RAL-177 1082 chr2R 19116795 19116847 chr2R 19116911 19116963 15 115 4.5 4.5 4.5 2.7 168 chr2R 19116795 intron 5-HT1A + chr2R 19116879 intron 5-HT1A + chr2R 19116963 intron 5-HT1A + chr2R_15_19115001 chr2R_19115001 RAL-177 1083 chr2R 19138649 19138697 chr2R 19138748 19138796 13 97 4.0 6.0 5.0 2.2 147 chr2R 19138649 intron CG15111 + chr2R 19138722 intron CG15111 + chr2R 19138796 intron CG15111 + chr2R_13_19135001 chr2R_19135001 RAL-177 1084 chr2R 19185625 19185648 chr2R 19185855 19185872 5 226 6.0 1.0 3.5 1.1 247 chr2R 19185625 intron hppy + chr2R 19185748 intron hppy + chr2R 19185872 intron hppy + chr2R_5_19185001 chr2R_19185001 RAL-177 1085 chr2R 19244294 19244339 chr2R 19244576 19244621 14 282 3.0 3.5 3.2 3.3 327 chr2R 19244294 intergenic not near genes chr2R 19244458 intergenic not near genes chr2R 19244621 intergenic not near genes chr2R_14_19240001 chr2R_19240001 RAL-177 1086 chr2R 19300941 19300994 chr2R 19301044 19301096 15 102 2.0 3.0 2.5 4.3 155 chr2R 19300941 intron Tab2 + chr2R 19301018 intron Tab2 + chr2R 19301096 intron Tab2 + chr2R_15_19300001 chr2R_19300001 RAL-177 1087 chr2R 19415334 19415338 chr2R 19415414 19415438 5 89 1.5 4.5 3.0 1.2 104 chr2R 19415334 intron hts - chr2R 19415386 intron hts - chr2R 19415438 intron hts - chr2R_5_19415001 chr2R_19415001 RAL-177 1088 chr2R 19498452 19498504 chr2R 19498549 19498601 13 97 0.0 1.0 0.5 8.7 149 chr2R 19498452 intron CG15120 + chr2R 19498526 intron CG15120 + chr2R 19498601 intron CG15120 + chr2R_13_19495001 chr2R_19495001 RAL-177 1089 chr2R 19601251 19601300 chr2R 19601361 19601390 15 109 1.5 1.5 1.5 6.0 139 chr2R 19601251 intron sm - chr2R 19601320 intron sm - chr2R 19601390 intron sm - chr2R_15_19600001 chr2R_19600001 RAL-177 1090 chr2R 19639574 19639598 chr2R 19639670 19639694 8 94 6.0 3.5 4.8 1.4 120 chr2R 19639574 intergenic not near genes chr2R 19639634 intergenic not near genes chr2R 19639694 intergenic not near genes chr2R_8_19635001 chr2R_19635001 RAL-177 1091 chr2R 19714697 19714735 chr2R 19714793 19714831 12 95 0.0 6.5 3.2 2.9 134 chr2R 19714697 3` UTR CG8517 + chr2R 19714764 3` UTR CG8517 + chr2R 19714831 3` UTR CG8517 + chr2R_12_19710001 chr2R_19710001 RAL-177 1092 chr2R 19715849 19715856 chr2R 19723326 19723345 blood 4 7484 7.0 6.0 6.5 0.5 7496 chr2R 19715849 intergenic not near genes chr2R 19719597 intergenic not near genes chr2R 19723345 intergenic not near genes chr2R_4_19715001 chr2R_19715001 RAL-177 1093 chr2R 19773990 19774039 chr2R 19774123 19774172 22 133 5.5 6.5 6.0 3.1 182 chr2R 19773990 intergenic not near genes chr2R 19774081 intergenic not near genes chr2R 19774172 intergenic not near genes chr2R_22_19770001 chr2R_19770001 RAL-177 1094 chr2R 19776579 19776622 chr2R 19779921 19779965 jockey 19 3341 3.5 5.5 4.5 3.5 3386 chr2R 19776579 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779965 intergenic not near genes chr2R_19_19775001 chr2R_19775001 RAL-177 1095 chr2R 19807657 19807703 chr2R 19807754 19807805 19 101 5.5 5.0 5.2 3.1 148 chr2R 19807657 intergenic not near genes chr2R 19807731 intergenic not near genes chr2R 19807805 intergenic not near genes chr2R_19_19805001 chr2R_19805001 RAL-177 1096 chr2R 19931591 19931602 chr2R 19931714 19931730 4 129 9.5 4.5 7.0 0.5 139 chr2R 19931591 intergenic not near genes chr2R 19931660 intergenic not near genes chr2R 19931730 intergenic not near genes chr2R_4_19930001 chr2R_19930001 RAL-177 1097 chr2R 19943255 19943295 chr2R 19943385 19943410 11 129 6.0 5.5 5.8 1.6 155 chr2R 19943255 intergenic not near genes chr2R 19943332 intergenic not near genes chr2R 19943410 intergenic not near genes chr2R_11_19940001 chr2R_19940001 RAL-177 1098 chr2R 19953728 19953773 chr2R 19953826 19953871 10 98 4.0 8.0 6.0 1.4 143 chr2R 19953728 intergenic CG44622 + chr2R 19953800 5` UTR CG44622 + chr2R 19953871 5` UTR CG44622 + chr2R_10_19950001 chr2R_19950001 RAL-177 1099 chr2R 19957424 19957463 chr2R 19962636 19962658 copia 7 5202 3.5 2.0 2.8 1.8 5234 chr2R 19957424 intergenic CG44623 + chr2R 19960041 intergenic not near genes chr2R 19962658 intergenic not near genes chr2R_7_19960001 chr2R_19960001 RAL-177 1100 chr2R 20069217 20069250 chr2R 20071876 20071901 opus 5 2657 1.0 5.5 3.2 1.2 2684 chr2R 20069217 intergenic not near genes chr2R 20070559 intergenic not near genes chr2R 20071901 intergenic not near genes chr2R_5_20070001 chr2R_20070001 RAL-177 1101 chr2R 20125724 20125749 chr2R 20125820 20125845 10 96 1.5 6.5 4.0 2.0 121 chr2R 20125724 intergenic not near genes chr2R 20125784 intergenic not near genes chr2R 20125845 intergenic not near genes chr2R_10_20125001 chr2R_20125001 RAL-177 1102 chr2R 20162665 20162691 chr2R 20162802 20162828 11 137 7.5 5.0 6.2 1.5 163 chr2R 20162665 intergenic not near genes chr2R 20162746 intergenic not near genes chr2R 20162828 intergenic not near genes chr2R_11_20160001 chr2R_20160001 RAL-177 1103 chr2R 20162692 20162711 chr2R 20162799 20162848 6 125 4.5 5.0 4.8 1.0 156 chr2R 20162692 intergenic not near genes chr2R 20162770 intergenic not near genes chr2R 20162848 intergenic not near genes chr2R_6_20160001 chr2R_20160001 RAL-177 1104 chr2R 20176484 20176513 chr2R 20176588 20176617 6 104 4.5 6.5 5.5 0.9 133 chr2R 20176484 intergenic not near genes chr2R 20176550 intergenic not near genes chr2R 20176617 intergenic not near genes chr2R_6_20175001 chr2R_20175001 RAL-177 1105 chr2R 20209593 20209623 chr2R 20209679 20209685 7 84 2.0 3.0 2.5 2.0 92 chr2R 20209593 intergenic not near genes chr2R 20209639 intergenic not near genes chr2R 20209685 intergenic not near genes chr2R_7_20205001 chr2R_20205001 RAL-177 1106 chr2R 20223936 20223985 chr2R 20224041 20224090 17 105 2.0 5.0 3.5 3.8 154 chr2R 20223936 intergenic not near genes chr2R 20224013 intergenic not near genes chr2R 20224090 intergenic not near genes chr2R_17_20220001 chr2R_20220001 RAL-177 1107 chr2R 20346640 20346688 chr2R 20346766 20346814 16 123 2.0 5.5 3.8 3.3 174 chr2R 20346640 intergenic CG16741 + chr2R 20346727 intergenic CG16741 + chr2R 20346814 intergenic CG16741 + chr2R_16_20345001 chr2R_20345001 RAL-177 1108 chr2R 20432481 20432500 chr2R 20432577 20432616 7 110 4.5 3.5 4.0 1.4 135 chr2R 20432481 intron CG12484 + chr2R 20432548 intron CG12484 + chr2R 20432616 intron CG12484 + chr2R_7_20430001 chr2R_20430001 RAL-177 1109 chr2R 20523047 20523069 chr2R 20523148 20523200 7 123 1.0 2.5 1.8 2.5 153 chr2R 20523047 intergenic not near genes chr2R 20523124 intergenic not near genes chr2R 20523200 intergenic not near genes chr2R_7_20520001 chr2R_20520001 RAL-177 1110 chr2R 20541969 20542016 chr2R 20542067 20542115 12 98 5.0 6.5 5.8 1.8 146 chr2R 20541969 intergenic not near genes chr2R 20542042 intergenic not near genes chr2R 20542115 intergenic not near genes chr2R_12_20540001 chr2R_20540001 RAL-177 1111 chr2R 20555325 20555337 chr2R 20555431 20555449 11 111 0.0 3.5 1.8 3.9 124 chr2R 20555325 intergenic not near genes chr2R 20555387 intergenic not near genes chr2R 20555449 intergenic not near genes chr2R_11_20555001 chr2R_20555001 RAL-177 1112 chr2R 20572552 20572585 chr2R 20572662 20572695 14 110 5.0 2.0 3.5 3.1 143 chr2R 20572552 intron qsm - chr2R 20572624 intron qsm - chr2R 20572695 intron qsm - chr2R_14_20570001 chr2R_20570001 RAL-177 1113 chr2R 20577071 20577120 chr2R 20577174 20577231 16 102 0.0 0.0 0.0 16.0 160 chr2R 20577071 intron qsm - chr2R 20577151 intron qsm - chr2R 20577231 intron qsm - chr2R_16_20575001 chr2R_20575001 RAL-177 1114 chr2R 20590654 20590669 chr2R 20590753 20590768 4 99 2.0 1.5 1.8 1.4 114 chr2R 20590654 intron bl + chr2R 20590711 intron bl + chr2R 20590768 intron bl + chr2R_4_20590001 chr2R_20590001 RAL-177 1115 chr2R 20633090 20633130 chr2R 20633185 20633199 10 98 6.0 3.0 4.5 1.8 109 chr2R 20633090 5` UTR Rcd6 - chr2R 20633144 5` UTR Rcd6 - chr2R 20633199 5` UTR Rcd6 - chr2R_10_20630001 chr2R_20630001 RAL-177 1116 chr2R 20690737 20690775 chr2R 20690833 20690871 9 95 7.0 6.0 6.5 1.2 134 chr2R 20690737 intergenic not near genes chr2R 20690804 intergenic not near genes chr2R 20690871 intergenic not near genes chr2R_9_20690001 chr2R_20690001 RAL-177 1117 chr2R 20702651 20702700 chr2R 20702747 20702796 15 96 3.5 5.0 4.2 2.9 145 chr2R 20702651 intron dpr + chr2R 20702724 intron dpr + chr2R 20702796 intron dpr + chr2R_15_20700001 chr2R_20700001 RAL-177 1118 chr2R 20739425 20739469 chr2R 20744213 20744256 F-element 9 4785 4.0 5.5 4.8 1.6 4831 chr2R 20739425 intron dpr + chr2R 20741840 intron dpr + chr2R 20744256 intron dpr + chr2R_9_20740001 chr2R_20740001 RAL-177 1119 chr2R 20760357 20760406 chr2R 20760460 20760509 7 102 3.0 1.0 2.0 2.3 152 chr2R 20760357 intergenic not near genes chr2R 20760433 intergenic not near genes chr2R 20760509 intergenic not near genes chr2R_7_20760001 chr2R_20760001 RAL-177 1120 chr2R 20783297 20783331 chr2R 20788089 20788123 F-element 12 4790 6.5 5.5 6.0 1.7 4826 chr2R 20783297 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788123 intergenic CG43666 - chr2R_12_20785001 chr2R_20785001 RAL-177 1121 chr2R 20796029 20796077 chr2R 20796162 20796210 6 132 5.5 5.0 5.2 1.0 181 chr2R 20796029 intergenic not near genes chr2R 20796120 intergenic not near genes chr2R 20796210 intergenic not near genes chr2R_6_20795001 chr2R_20795001 RAL-177 1122 chr2R 20812232 20812276 chr2R 20812332 20812344 11 96 1.5 1.5 1.5 4.4 112 chr2R 20812232 intergenic not near genes chr2R 20812288 intergenic not near genes chr2R 20812344 intergenic not near genes chr2R_11_20810001 chr2R_20810001 RAL-177 1123 chr2R 20861523 20861563 chr2R 20861823 20861868 10 302 0.0 7.0 3.5 2.2 345 chr2R 20861523 intergenic not near genes chr2R 20861696 intergenic not near genes chr2R 20861868 intergenic not near genes chr2R_10_20860001 chr2R_20860001 RAL-177 1124 chr2R 20928755 20928793 chr2R 20928854 20928892 11 93 5.5 3.0 4.2 2.1 137 chr2R 20928755 intron Rx + chr2R 20928824 intron Rx + chr2R 20928892 intron Rx + chr2R_11_20925001 chr2R_20925001 RAL-177 1125 chr2R 20962890 20962939 chr2R 20963008 20963057 16 118 1.5 4.0 2.8 4.2 167 chr2R 20962890 intergenic not near genes chr2R 20962974 intergenic not near genes chr2R 20963057 intergenic not near genes chr2R_16_20960001 chr2R_20960001 RAL-177 1126 chr2R 20967015 20967057 chr2R 20967112 20967148 9 96 2.0 0.0 1.0 4.5 133 chr2R 20967015 intergenic not near genes chr2R 20967082 intergenic not near genes chr2R 20967148 intergenic not near genes chr2R_9_20965001 chr2R_20965001 RAL-177 1127 chr2R 20968047 20968087 chr2R 20968143 20968183 22 96 5.5 2.0 3.8 4.6 136 chr2R 20968047 intergenic not near genes chr2R 20968115 intergenic not near genes chr2R 20968183 intergenic not near genes chr2R_22_20965001 chr2R_20965001 RAL-177 1128 chr2R 21060620 21060655 chr2R 21060716 21060750 17 95 1.5 4.5 3.0 4.2 130 chr2R 21060620 intergenic CG15653 -,mRpL54 + chr2R 21060685 intergenic mRpL54 +,CG15653 - chr2R 21060750 intergenic mRpL54 +,CG15653 - chr2R_17_21060001 chr2R_21060001 RAL-177 1129 chr2R 21151140 21151146 chr2R 21153793 21153799 opus 6 2653 1.0 13.5 7.2 0.7 2659 chr2R 21151140 intron CG30389 - chr2R 21152470 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_6_21150001 chr2R_21150001 RAL-177 1130 chr2R 21285420 21285435 chr2R 21285517 21285532 6 97 12.5 8.5 10.5 0.5 112 chr2R 21285420 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285476 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285532 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_6_21285001 chr2R_21285001 RAL-177 1131 chr2R 21370498 21370514 chr2R 21370625 21370638 9 127 10.5 5.5 8.0 1.0 140 chr2R 21370498 intron cv-2 - chr2R 21370568 intron cv-2 - chr2R 21370638 intron cv-2 - chr2R_9_21370001 chr2R_21370001 RAL-177 1132 chr2R 21373378 21373411 chr2R 21373716 21373744 11 336 4.0 3.0 3.5 2.4 366 chr2R 21373378 intron cv-2 - chr2R 21373561 intron cv-2 - chr2R 21373744 intron cv-2 - chr2R_11_21370001 chr2R_21370001 RAL-177 1133 chr2R 21373414 21373420 chr2R 21373715 21373733 6 315 3.0 3.0 3.0 1.5 319 chr2R 21373414 intron cv-2 - chr2R 21373574 intron cv-2 - chr2R 21373733 intron cv-2 - chr2R_6_21370001 chr2R_21370001 RAL-177 1134 chr2R 21381912 21381938 chr2R 21382019 21382045 9 107 5.0 0.0 2.5 2.6 133 chr2R 21381912 intergenic not near genes chr2R 21381978 intergenic not near genes chr2R 21382045 intergenic not near genes chr2R_9_21380001 chr2R_21380001 RAL-177 1135 chr2R 21456529 21456553 chr2R 21456626 21456650 7 95 4.0 2.5 3.2 1.7 121 chr2R 21456529 intron Sdc - chr2R 21456590 intron Sdc - chr2R 21456650 intron Sdc - chr2R_7_21455001 chr2R_21455001 RAL-177 1136 chr2R 21478603 21478640 chr2R 21478702 21478739 15 99 5.0 6.0 5.5 2.3 136 chr2R 21478603 intron Sdc - chr2R 21478671 intron Sdc - chr2R 21478739 intron Sdc - chr2R_15_21475001 chr2R_21475001 RAL-177 1137 chr2R 21482997 21483046 chr2R 21483093 21483108 10 93 3.5 0.5 2.0 3.3 111 chr2R 21482997 exon Sara + chr2R 21483052 intron Sara + chr2R 21483108 intron Sara + chr2R_10_21480001 chr2R_21480001 RAL-177 1138 chr2R 21540675 21540690 chr2R 21540906 21540921 10 231 2.5 1.5 2.0 3.3 246 chr2R 21540675 intron Egfr + chr2R 21540798 intron Egfr + chr2R 21540921 intron Egfr + chr2R_10_21540001 chr2R_21540001 RAL-177 1139 chr2R 21576604 21576647 chr2R 21576728 21576784 4 124 2.0 0.0 1.0 2.0 180 chr2R 21576604 intergenic not near genes chr2R 21576694 intergenic not near genes chr2R 21576784 intergenic not near genes chr2R_4_21575001 chr2R_21575001 RAL-177 1140 chr2R 21738296 21738310 chr2R 21747435 21747471 roo 8 9156 1.0 4.0 2.5 2.3 9175 chr2R 21738296 intergenic not near genes chr2R 21742884 intergenic not near genes chr2R 21747471 intergenic not near genes chr2R_8_21740001 chr2R_21740001 RAL-177 1141 chr2R 21753062 21753116 chr2R 21753567 21753621 roo 25 503 2.0 0.0 1.0 12.5 559 chr2R 21753062 intergenic not near genes chr2R 21753342 intergenic not near genes chr2R 21753621 intergenic not near genes chr2R_25_21750001 chr2R_21750001 RAL-177 1142 chr2R 21774752 21774756 chr2R 22652309 22652323 4 877564 18.5 4.0 11.2 0.3 877571 chr2R 21774752 3` UTR CG4021 + chr2R 22213538 intron ari-2 + chr2R 22652323 3` UTR nsr + chr2R_4_22210001 chr2R_22210001 RAL-177 1143 chr2R 21809507 21809555 chr2R 21817767 21817771 roo 17 8257 1.5 4.5 3.0 4.2 8264 chr2R 21809507 intergenic not near genes chr2R 21813639 intergenic not near genes chr2R 21817771 intergenic not near genes chr2R_17_21810001 chr2R_21810001 RAL-177 1144 chr2R 21840785 21840830 chr2R 21840876 21840912 8 91 2.5 2.5 2.5 2.3 127 chr2R 21840785 intergenic not near genes chr2R 21840848 intergenic not near genes chr2R 21840912 intergenic not near genes chr2R_8_21840001 chr2R_21840001 RAL-177 1145 chr2R 21956280 21956317 chr2R 21956378 21956416 14 96 3.5 6.0 4.8 2.4 136 chr2R 21956280 intergenic not near genes chr2R 21956348 intergenic not near genes chr2R 21956416 intergenic not near genes chr2R_14_21955001 chr2R_21955001 RAL-177 1146 chr2R 22004280 22004320 chr2R 22004394 22004434 9 113 5.0 1.5 3.2 2.1 154 chr2R 22004280 intron CG34370 - chr2R 22004357 intron CG34370 - chr2R 22004434 intron CG34370 - chr2R_9_22000001 chr2R_22000001 RAL-177 1147 chr2R 22014208 22014223 chr2R 22014297 22014319 4 94 4.0 5.5 4.8 0.7 111 chr2R 22014208 intron CG34370 - chr2R 22014264 intron CG34370 - chr2R 22014319 intron CG34370 - chr2R_4_22010001 chr2R_22010001 RAL-177 1148 chr2R 22029461 22029502 chr2R 22029618 22029660 15 158 5.5 4.5 5.0 2.5 199 chr2R 22029461 intron CG34370 - chr2R 22029560 intron CG34370 - chr2R 22029660 intron CG34370 - chr2R_15_22025001 chr2R_22025001 RAL-177 1149 chr2R 22040153 22040187 chr2R 22040254 22040288 5 98 6.5 8.0 7.2 0.6 135 chr2R 22040153 intergenic not near genes chr2R 22040220 intergenic not near genes chr2R 22040288 intergenic not near genes chr2R_5_22040001 chr2R_22040001 RAL-177 1150 chr2R 22099864 22099884 chr2R 22099965 22099985 11 101 2.5 9.0 5.8 1.6 121 chr2R 22099864 intergenic CG11073 - chr2R 22099924 intergenic CG11073 - chr2R 22099985 intergenic CG11073 - chr2R_11_22095001 chr2R_22095001 RAL-177 1151 chr2R 22120810 22120813 chr2R 22121032 22121035 4 222 0.0 2.5 1.2 1.8 225 chr2R 22120810 intron Vrp1 - chr2R 22120922 intron Vrp1 - chr2R 22121035 intron Vrp1 - chr2R_4_22120001 chr2R_22120001 RAL-177 1152 chr2R 22132274 22132286 chr2R 22132374 22132386 7 100 3.5 2.5 3.0 1.8 112 chr2R 22132274 intergenic not near genes chr2R 22132330 intergenic not near genes chr2R 22132386 intergenic not near genes chr2R_7_22130001 chr2R_22130001 RAL-177 1153 chr2R 22185671 22185685 chr2R 22185790 22185804 7 119 3.5 3.0 3.2 1.7 133 chr2R 22185671 3` UTR MED16 + chr2R 22185738 3` UTR MED16 + chr2R 22185804 3` UTR MED16 + chr2R_7_22185001 chr2R_22185001 RAL-177 1154 chr2R 22258488 22258533 chr2R 22258629 22258684 10 148 1.0 1.0 1.0 5.0 196 chr2R 22258488 intron dve + chr2R 22258586 intron dve + chr2R 22258684 intron dve + chr2R_10_22255001 chr2R_22255001 RAL-177 1155 chr2R 22264542 22264579 chr2R 22264628 22264639 5 85 0.0 7.5 3.8 1.0 97 chr2R 22264542 intron dve + chr2R 22264590 intron dve + chr2R 22264639 intron dve + chr2R_5_22260001 chr2R_22260001 RAL-177 1156 chr2R 22297704 22297715 chr2R 22297800 22297810 7 95 0.0 4.5 2.2 2.2 106 chr2R 22297704 intergenic not near genes chr2R 22297757 intergenic wdp - chr2R 22297810 intergenic wdp - chr2R_7_22295001 chr2R_22295001 RAL-177 1157 chr2R 22297717 22297737 chr2R 22297788 22297807 4 83 0.0 3.0 1.5 1.6 90 chr2R 22297717 intergenic wdp - chr2R 22297762 intergenic wdp - chr2R 22297807 intergenic wdp - chr2R_4_22295001 chr2R_22295001 RAL-177 1158 chr2R 22349682 22349719 chr2R 22351486 22351486 jockey 10 1800 5.5 4.5 5.0 1.7 1804 chr2R 22349682 intron Liprin-gamma - chr2R 22350584 intron Liprin-gamma - chr2R 22351486 intron Liprin-gamma - chr2R_10_22350001 chr2R_22350001 RAL-177 1159 chr2R 22360366 22360379 chr2R 22360819 22360830 jockey 8 453 13.0 2.5 7.8 0.9 464 chr2R 22360366 intron Liprin-gamma - chr2R 22360598 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_8_22360001 chr2R_22360001 RAL-177 1160 chr2R 22362645 22362686 chr2R 22362744 22362785 13 99 3.5 10.5 7.0 1.6 140 chr2R 22362645 intron Liprin-gamma - chr2R 22362715 intron Liprin-gamma - chr2R 22362785 intron Liprin-gamma - chr2R_13_22360001 chr2R_22360001 RAL-177 1161 chr2R 22380343 22380388 chr2R 22380454 22380495 18 110 4.5 0.5 2.5 5.1 152 chr2R 22380343 intron wrapper + chr2R 22380419 intron wrapper + chr2R 22380495 intron wrapper + chr2R_18_22380001 chr2R_22380001 RAL-177 1162 chr2R 22460363 22460405 chr2R 22460462 22460504 17 98 2.0 3.0 2.5 4.9 141 chr2R 22460363 intron CG10384 + chr2R 22460434 intron CG10384 + chr2R 22460504 intron CG10384 + chr2R_17_22460001 chr2R_22460001 RAL-177 1163 chr2R 22503863 22503896 chr2R 22503967 22504011 16 113 0.0 2.5 1.2 7.3 148 chr2R 22503863 intron px - chr2R 22503937 intron px - chr2R 22504011 intron px - chr2R_16_22500001 chr2R_22500001 RAL-177 1164 chr2R 22525759 22525785 chr2R 22529330 22529352 jockey 5 3574 4.5 1.0 2.8 1.3 3593 chr2R 22525759 intron px - chr2R 22527556 intron px - chr2R 22529352 intron px - chr2R_5_22525001 chr2R_22525001 RAL-177 1165 chr2R 22545599 22545650 chr2R 22545698 22545749 17 99 5.5 5.5 5.5 2.6 150 chr2R 22545599 intron px - chr2R 22545674 intron px - chr2R 22545749 intron px - chr2R_17_22545001 chr2R_22545001 RAL-177 1166 chr2R 22574135 22574187 chr2R 22574238 22574287 6 100 2.5 5.5 4.0 1.2 152 chr2R 22574135 intron dnr1 - chr2R 22574211 intron dnr1 - chr2R 22574287 intron dnr1 - chr2R_6_22570001 chr2R_22570001 RAL-177 1167 chr2R 22575684 22575693 chr2R 22575739 22575792 6 87 4.0 4.5 4.2 1.2 108 chr2R 22575684 intron dnr1 - chr2R 22575738 intron dnr1 - chr2R 22575792 intron dnr1 - chr2R_6_22575001 chr2R_22575001 RAL-177 1168 chr2R 22659487 22659530 chr2R 22659584 22659628 10 96 3.5 8.0 5.8 1.5 141 chr2R 22659487 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R 22659558 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R 22659628 3` UTR,5` UTR,5` UTR CG13510 +,CG13511 +,CG42565 + chr2R_10_22655001 chr2R_22655001 RAL-177 1169 chr2R 22683709 22683749 chr2R 22683811 22683831 13 104 4.0 3.0 3.5 2.9 122 chr2R 22683709 intergenic not near genes chr2R 22683770 intergenic not near genes chr2R 22683831 intergenic not near genes chr2R_13_22680001 chr2R_22680001 RAL-177 1170 chr2R 22756638 22756651 chr2R 22756736 22756749 5 98 2.0 2.0 2.0 1.7 111 chr2R 22756638 intron,intron CG42260 -,CR30267 + chr2R 22756694 intron,intron CG42260 -,CR30267 + chr2R 22756749 intron,intron CG42260 -,CR30267 + chr2R_5_22755001 chr2R_22755001 RAL-177 1171 chr2R 22794812 22794827 chr2R 22794888 22794894 4 82 3.5 1.0 2.2 1.2 82 chr2R 22794812 intron CG42260 - chr2R 22794853 intron CG42260 - chr2R 22794894 intron CG42260 - chr2R_4_22790001 chr2R_22790001 RAL-177 1172 chr2R 22857794 22857812 chr2R 22857873 22857921 5 101 3.5 1.5 2.5 1.4 127 chr2R 22857794 exon inaD - chr2R 22857858 exon inaD - chr2R 22857921 exon inaD - chr2R_5_22855001 chr2R_22855001 RAL-177 1173 chr2R 22941798 22941849 chr2R 22941897 22941948 12 99 5.5 6.0 5.8 1.8 150 chr2R 22941798 intergenic CG42694 + chr2R 22941873 intergenic CG42694 + chr2R 22941948 5` UTR CG42694 + chr2R_12_22940001 chr2R_22940001 RAL-177 1174 chr2R 22971483 22971528 chr2R 22971580 22971627 15 97 2.5 6.0 4.2 2.9 144 chr2R 22971483 intergenic not near genes chr2R 22971555 intergenic not near genes chr2R 22971627 intergenic not near genes chr2R_15_22970001 chr2R_22970001 RAL-177 1175 chr2R 22975829 22975869 chr2R 22975966 22976006 17 135 8.5 4.0 6.2 2.4 177 chr2R 22975829 intergenic not near genes chr2R 22975918 intergenic not near genes chr2R 22976006 intergenic not near genes chr2R_17_22975001 chr2R_22975001 RAL-177 1176 chr2R 22978265 22978310 chr2R 22978363 22978409 12 95 4.0 4.5 4.2 2.3 144 chr2R 22978265 intergenic not near genes chr2R 22978337 intergenic not near genes chr2R 22978409 intergenic not near genes chr2R_12_22975001 chr2R_22975001 RAL-177 1177 chr2R 22991610 22991658 chr2R 22991722 22991770 13 110 3.0 2.0 2.5 3.7 160 chr2R 22991610 intron twi + chr2R 22991690 intron twi + chr2R 22991770 intron twi + chr2R_13_22990001 chr2R_22990001 RAL-177 1178 chr2R 23029599 23029625 chr2R 23029696 23029706 5 94 6.5 4.5 5.5 0.8 107 chr2R 23029599 intron,intron twi +,CG42741 - chr2R 23029652 intron,intron twi +,CG42741 - chr2R 23029706 intron,intron twi +,CG42741 - chr2R_5_23025001 chr2R_23025001 RAL-177 1179 chr2R 23052636 23052686 chr2R 23052732 23052745 18 94 6.5 9.0 7.8 2.0 109 chr2R 23052636 intergenic not near genes chr2R 23052690 intergenic not near genes chr2R 23052745 intergenic not near genes chr2R_18_23050001 chr2R_23050001 RAL-177 1180 chr2R 23053989 23054018 chr2R 23054087 23054116 16 98 3.5 1.0 2.2 5.0 127 chr2R 23053989 intergenic not near genes chr2R 23054052 intergenic not near genes chr2R 23054116 intergenic not near genes chr2R_16_23050001 chr2R_23050001 RAL-177 1181 chr2R 23061760 23061786 chr2R 23061872 23061900 7 112 5.0 8.5 6.8 0.9 140 chr2R 23061760 3` UTR l(2)06496 - chr2R 23061830 3` UTR l(2)06496 - chr2R 23061900 3` UTR l(2)06496 - chr2R_7_23060001 chr2R_23060001 RAL-177 1182 chr2R 23074846 23074848 chr2R 23075017 23075062 20 174 17.0 24.5 20.8 0.9 216 chr2R 23074846 5` UTR CG3085 + chr2R 23074954 intron CG3085 + chr2R 23075062 intron CG3085 + chr2R_20_23070001 chr2R_23070001 RAL-177 1183 chr2R 23155697 23155873 chr2R 23155804 23155969 23 104 2.5 1.5 2.0 7.7 272 chr2R 23155697 intron CG9899 + chr2R 23155833 intron CG9899 + chr2R 23155969 intron CG9899 + chr2R_23_23155001 chr2R_23155001 RAL-177 1184 chr2R 23184294 23184297 chr2R 23184349 23184402 5 89 0.0 2.5 1.2 2.3 108 chr2R 23184294 intron,intron CG34371 -,CG13539 + chr2R 23184348 intron,intron CG34371 -,CG13539 + chr2R 23184402 intron,intron CG34371 -,CG13539 + chr2R_5_23180001 chr2R_23180001 RAL-177 1185 chr2R 23186068 23186121 chr2R 23186233 23186275 8 164 1.5 0.5 1.0 4.0 207 chr2R 23186068 intron CG34371 - chr2R 23186172 intron CG34371 - chr2R 23186275 intron CG34371 - chr2R_8_23185001 chr2R_23185001 RAL-177 1186 chr2R 23188535 23188579 chr2R 23188633 23188677 12 97 10.5 3.5 7.0 1.5 142 chr2R 23188535 intron CG34371 - chr2R 23188606 intron CG34371 - chr2R 23188677 intron CG34371 - chr2R_12_23185001 chr2R_23185001 RAL-177 1187 chr2R 23190005 23190020 chr2R 23190105 23190120 8 100 1.5 0.0 0.8 4.4 115 chr2R 23190005 intron CG34371 - chr2R 23190062 intron CG34371 - chr2R 23190120 intron CG34371 - chr2R_8_23190001 chr2R_23190001 RAL-177 1188 chr2R 23191729 23191771 chr2R 23192384 23192386 11 648 3.5 2.0 2.8 2.9 657 chr2R 23191729 intron CG34371 - chr2R 23192058 intron CG34371 - chr2R 23192386 intron CG34371 - chr2R_11_23190001 chr2R_23190001 RAL-177 1189 chr2R 23228282 23228326 chr2R 23228406 23228422 12 118 2.0 4.5 3.2 2.9 140 chr2R 23228282 intergenic not near genes chr2R 23228352 intergenic not near genes chr2R 23228422 intergenic not near genes chr2R_12_23225001 chr2R_23225001 RAL-177 1190 chr2R 23239675 23239722 chr2R 23243143 23243178 11 3458 28.0 28.0 28.0 0.4 3503 chr2R 23239675 intergenic not near genes chr2R 23241426 intergenic not near genes chr2R 23243178 intergenic not near genes chr2R_11_23240001 chr2R_23240001 RAL-177 1191 chr2R 23291308 23291338 chr2R 23291406 23291436 4 98 6.0 5.0 5.5 0.6 128 chr2R 23291308 3` UTR CR44783 - chr2R 23291372 3` UTR CR44783 - chr2R 23291436 intergenic CR44783 - chr2R_4_23290001 chr2R_23290001 RAL-177 1192 chr2R 23343381 23343424 chr2R 23343731 23343774 16 350 5.5 7.5 6.5 2.1 393 chr2R 23343381 intergenic CG3502 - chr2R 23343578 exon CG3502 - chr2R 23343774 exon CG3502 - chr2R_16_23340001 chr2R_23340001 RAL-177 1193 chr2R 23402588 23402633 chr2R 23407684 23407729 flea 11 5096 6.0 10.5 8.2 1.2 5141 chr2R 23402588 intergenic CG3520 - chr2R 23405158 intergenic not near genes chr2R 23407729 intergenic not near genes chr2R_11_23405001 chr2R_23405001 RAL-177 1194 chr2R 23467552 23467585 chr2R 23467702 23467709 5 145 2.5 4.0 3.2 1.2 157 chr2R 23467552 intron CG43795 + chr2R 23467630 intron CG43795 + chr2R 23467709 intron CG43795 + chr2R_5_23465001 chr2R_23465001 RAL-177 1195 chr2R 23485389 23485403 chr2R 23485490 23485505 8 101 2.5 4.5 3.5 1.8 116 chr2R 23485389 exon CG43795 + chr2R 23485447 intron CG43795 + chr2R 23485505 intron CG43795 + chr2R_8_23485001 chr2R_23485001 RAL-177 1196 chr2R 23487427 23487477 chr2R 23487529 23487578 19 95 3.5 3.0 3.2 4.5 151 chr2R 23487427 intron CG43795 + chr2R 23487502 intron CG43795 + chr2R 23487578 intron CG43795 + chr2R_19_23485001 chr2R_23485001 RAL-177 1197 chr2R 23522395 23522421 chr2R 23522494 23522512 5 96 7.0 4.0 5.5 0.8 117 chr2R 23522395 intron RabX1 - chr2R 23522454 intron RabX1 - chr2R 23522512 intron RabX1 - chr2R_5_23520001 chr2R_23520001 RAL-177 1198 chr2R 23522429 23522446 chr2R 23522492 23522525 7 82 4.5 3.5 4.0 1.4 96 chr2R 23522429 intron RabX1 - chr2R 23522477 intron RabX1 - chr2R 23522525 intron RabX1 - chr2R_7_23520001 chr2R_23520001 RAL-177 1199 chr2R 23529555 23529607 chr2R 23537151 23537202 412 18 7582 5.0 6.0 5.5 2.8 7647 chr2R 23529555 intron bw - chr2R 23533378 intron bw - chr2R 23537202 exon bw - chr2R_18_23530001 chr2R_23530001 RAL-177 1200 chr2R 23607018 23607193 chr2R 23607119 23607305 28 108 3.0 2.5 2.8 7.4 287 chr2R 23607018 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607305 intron CG17664 - chr2R_28_23605001 chr2R_23605001 RAL-177 1201 chr2R 23663595 23663637 chr2R 23663706 23663748 15 111 3.0 3.5 3.2 3.6 153 chr2R 23663595 intron Pde8 + chr2R 23663672 intron Pde8 + chr2R 23663748 intron Pde8 + chr2R_15_23660001 chr2R_23660001 RAL-177 1202 chr2R 23776124 23776175 chr2R 23776217 23776255 14 87 6.5 2.5 4.5 2.5 131 chr2R 23776124 intron CG9850 - chr2R 23776190 intron CG9850 - chr2R 23776255 intron CG9850 - chr2R_14_23775001 chr2R_23775001 RAL-177 1203 chr2R 23784451 23784504 chr2R 23784549 23784602 19 97 3.5 1.5 2.5 5.4 151 chr2R 23784451 intron CG9850 - chr2R 23784526 intron CG9850 - chr2R 23784602 intron CG9850 - chr2R_19_23780001 chr2R_23780001 RAL-177 1204 chr2R 23914314 23914332 chr2R 23921937 23921976 412 9 7632 3.5 8.5 6.0 1.3 7662 chr2R 23914314 exon kcc + chr2R 23918145 intron kcc + chr2R 23921976 exon kcc + chr2R_9_23915001 chr2R_23915001 RAL-177 1205 chr2R 23926826 23926862 chr2R 23926912 23926964 11 95 2.5 5.0 3.8 2.3 138 chr2R 23926826 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926895 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926964 3` UTR Ca-P60A - chr2R_11_23925001 chr2R_23925001 RAL-177 1206 chr2R 23986501 23986545 chr2R 23986601 23986645 13 99 3.5 10.5 7.0 1.6 144 chr2R 23986501 intron Phm - chr2R 23986573 intron Phm - chr2R 23986645 intron,5` UTR Phm -,CG30178 + chr2R_13_23985001 chr2R_23985001 RAL-177 1207 chr2R 24031363 24031413 chr2R 24031467 24031507 21 100 4.0 6.5 5.2 3.4 144 chr2R 24031363 5` UTR CG30172 - chr2R 24031435 intergenic CG30172 -,Chi - chr2R 24031507 intergenic Chi -,CG30172 - chr2R_21_24030001 chr2R_24030001 RAL-177 1208 chr2R 24144064 24144087 chr2R 24144176 24144199 10 112 6.0 1.0 3.5 2.2 135 chr2R 24144064 intron Dat + chr2R 24144132 intron Dat + chr2R 24144199 intron Dat + chr2R_10_24140001 chr2R_24140001 RAL-177 1209 chr2R 24147065 24147069 chr2R 24154644 24154662 412 4 7590 7.5 5.5 6.5 0.5 7597 chr2R 24147065 intron Dat + chr2R 24150864 intron Dat + chr2R 24154662 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-177 1210 chr2R 24177215 24177268 chr2R 24184720 24184773 412 16 7505 4.5 2.0 3.2 3.8 7558 chr2R 24177215 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184773 3` UTR Nop60B + chr2R_16_24180001 chr2R_24180001 RAL-177 1211 chr2R 24204633 24204686 chr2R 24204814 24204817 8 174 4.5 3.0 3.8 1.7 184 chr2R 24204633 intron CG11406 - chr2R 24204725 intron CG11406 - chr2R 24204817 intron CG11406 - chr2R_8_24200001 chr2R_24200001 RAL-177 1212 chr2R 24210385 24210419 chr2R 24210570 24210610 11 187 3.0 1.5 2.2 3.4 225 chr2R 24210385 intergenic not near genes chr2R 24210498 intergenic not near genes chr2R 24210610 intergenic not near genes chr2R_11_24210001 chr2R_24210001 RAL-177 1213 chr2R 24353408 24353461 chr2R 24361790 24361827 roo 6 8379 5.0 2.5 3.8 1.2 8419 chr2R 24353408 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361827 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-177 1214 chr2R 24430921 24430947 chr2R 24431029 24431055 15 106 0.0 16.0 8.0 1.7 134 chr2R 24430921 intergenic CG15873 -,Pgam5-2 - chr2R 24430988 intergenic CG15873 -,Pgam5-2 - chr2R 24431055 intergenic Pgam5-2 -,CG15873 - chr2R_15_24430001 chr2R_24430001 RAL-177 1215 chr2R 24542626 24542650 chr2R 24542989 24543013 6 363 5.0 4.0 4.5 1.1 387 chr2R 24542626 intron,intron CG4622 -,ITP + chr2R 24542820 intron,intron CG4622 -,ITP + chr2R 24543013 intron,intron CG4622 -,ITP + chr2R_6_24540001 chr2R_24540001 RAL-177 1216 chr2R 24548908 24548949 chr2R 24549006 24549035 15 93 4.5 1.0 2.8 3.9 127 chr2R 24548908 intron,intron CG4622 -,ITP + chr2R 24548972 intron,intron CG4622 -,ITP + chr2R 24549035 intron,intron CG4622 -,ITP + chr2R_15_24545001 chr2R_24545001 RAL-177 1217 chr2R 24647570 24647618 chr2R 24655146 24655190 412 15 7573 5.0 3.0 4.0 3.0 7620 chr2R 24647570 intergenic not near genes chr2R 24651380 intergenic not near genes chr2R 24655190 intergenic not near genes chr2R_15_24650001 chr2R_24650001 RAL-177 1218 chr2R 24727872 24727915 chr2R 24735400 24735442 mdg1 7 7520 4.0 3.5 3.8 1.5 7570 chr2R 24727872 intron Mid1 - chr2R 24731657 intron Mid1 - chr2R 24735442 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-177 1219 chr2R 24763601 24763624 chr2R 24765586 24765620 G2 9 1992 5.0 4.5 4.8 1.6 2019 chr2R 24763601 exon CG3894 + chr2R 24764610 intron CG3894 + chr2R 24765620 exon CG3894 + chr2R_9_24760001 chr2R_24760001 RAL-177 1220 chr2R 24856995 24857011 chr2R 24857231 24857272 6 255 3.0 6.5 4.8 1.0 277 chr2R 24856995 intergenic not near genes chr2R 24857134 intergenic not near genes chr2R 24857272 intergenic not near genes chr2R_6_24855001 chr2R_24855001 RAL-177 1221 chr2R 24859825 24859862 chr2R 24859926 24859947 12 96 3.5 0.5 2.0 4.0 122 chr2R 24859825 5` UTR CR44829 + chr2R 24859886 5` UTR CR44829 + chr2R 24859947 5` UTR CR44829 + chr2R_12_24855001 chr2R_24855001 RAL-177 1222 chr2R 24884035 24884078 chr2R 24884137 24884180 29 100 3.5 4.0 3.8 6.0 145 chr2R 24884035 intron NKAIN + chr2R 24884108 intron NKAIN + chr2R 24884180 intron NKAIN + chr2R_29_24880001 chr2R_24880001 RAL-177 1223 chr2R 25061331 25061356 chr2R 25061424 25061449 8 95 5.5 4.0 4.8 1.4 118 chr2R 25061331 intergenic not near genes chr2R 25061390 intergenic not near genes chr2R 25061449 intergenic not near genes chr2R_8_25060001 chr2R_25060001 RAL-177 1224 chr2R 25081593 25081639 chr2R 25082703 25082728 9 1104 3.5 3.5 3.5 2.0 1135 chr2R 25081593 intron gol - chr2R 25082160 intron gol - chr2R 25082728 intron gol - chr2R_9_25080001 chr2R_25080001 RAL-177 1225 chr2R 25101269 25101309 chr2R 25101391 25101419 8 118 3.5 6.0 4.8 1.4 150 chr2R 25101269 intron lov - chr2R 25101344 intron lov - chr2R 25101419 intron lov - chr2R_8_25100001 chr2R_25100001 RAL-177 1226 chr2R 25141632 25141683 chr2R 25159342 25159360 roo 12 17700 3.0 5.0 4.0 2.4 17728 chr2R 25141632 intergenic not near genes chr2R 25150496 intergenic not near genes chr2R 25159360 intergenic not near genes chr2R_12_25150001 chr2R_25150001 RAL-177 1227 chr2R 25234754 25234787 chr2R 25234854 25234886 5 100 3.5 4.5 4.0 1.0 132 chr2R 25234754 intron CG9380 - chr2R 25234820 intron CG9380 - chr2R 25234886 intron CG9380 - chr2R_5_25230001 chr2R_25230001 RAL-177 1228 chr3L 21984 21996 chr3L 23065 23077 4 1080 17.5 24.0 20.8 0.2 1093 chr3L 21984 intergenic mthl8 + chr3L 22530 intron mthl8 + chr3L 23077 5` UTR mthl8 + chr3L_4_20001 chr3L_20001 RAL-177 1229 chr3L 43326 43361 chr3L 44763 44798 7 1438 19.0 32.0 25.5 0.3 1472 chr3L 43326 intergenic not near genes chr3L 44062 intergenic not near genes chr3L 44798 intergenic not near genes chr3L_7_40001 chr3L_40001 RAL-177 1230 chr3L 110192 110242 chr3L 119379 119418 roo 16 9186 6.5 5.0 5.8 2.4 9226 chr3L 110192 intergenic not near genes chr3L 114805 intergenic not near genes chr3L 119418 intergenic not near genes chr3L_16_110001 chr3L_110001 RAL-177 1231 chr3L 165259 165305 chr3L 165360 165406 14 100 5.0 6.5 5.8 2.1 147 chr3L 165259 intron p130CAS + chr3L 165332 intron p130CAS + chr3L 165406 intron p130CAS + chr3L_14_165001 chr3L_165001 RAL-177 1232 chr3L 274726 274763 chr3L 274921 274973 17 197 48.5 50.5 49.5 0.3 247 chr3L 274726 exon miple2 + chr3L 274850 intron miple2 + chr3L 274973 3` UTR miple2 + chr3L_17_270001 chr3L_270001 RAL-177 1233 chr3L 402688 402698 chr3L 409751 409764 297 5 7069 9.5 8.0 8.8 0.5 7076 chr3L 402688 intergenic not near genes chr3L 406226 intergenic not near genes chr3L 409764 intergenic not near genes chr3L_5_405001 chr3L_405001 RAL-177 1234 chr3L 402699 402717 chr3L 409747 409789 297 7 7065 5.0 7.5 6.2 1.0 7090 chr3L 402699 intergenic not near genes chr3L 406244 intergenic not near genes chr3L 409789 intergenic not near genes chr3L_7_405001 chr3L_405001 RAL-177 1235 chr3L 448530 448574 chr3L 448705 448749 9 175 10.0 7.5 8.8 0.9 219 chr3L 448530 intron klar - chr3L 448640 intron klar - chr3L 448749 intron klar - chr3L_9_445001 chr3L_445001 RAL-177 1236 chr3L 456176 456215 chr3L 456263 456283 10 90 3.0 4.0 3.5 2.2 107 chr3L 456176 intron klar - chr3L 456230 intron klar - chr3L 456283 intron klar - chr3L_10_455001 chr3L_455001 RAL-177 1237 chr3L 470850 470878 chr3L 470956 470963 4 98 2.5 0.0 1.2 1.8 113 chr3L 470850 intron klar - chr3L 470906 intron klar - chr3L 470963 intron klar - chr3L_4_470001 chr3L_470001 RAL-177 1238 chr3L 514257 514304 chr3L 514354 514386 11 96 3.5 5.0 4.2 2.1 129 chr3L 514257 intron klar - chr3L 514322 intron klar - chr3L 514386 intron klar - chr3L_11_510001 chr3L_510001 RAL-177 1239 chr3L 563963 563972 chr3L 564162 564171 4 198 8.5 4.0 6.2 0.6 208 chr3L 563963 intron hipk + chr3L 564067 intron hipk + chr3L 564171 intron hipk + chr3L_4_560001 chr3L_560001 RAL-177 1240 chr3L 563973 564002 chr3L 564156 564201 8 196 3.0 2.5 2.8 2.1 228 chr3L 563973 intron hipk + chr3L 564087 intron hipk + chr3L 564201 intron hipk + chr3L_8_560001 chr3L_560001 RAL-177 1241 chr3L 606875 606922 chr3L 606971 607021 14 97 6.0 0.0 3.0 3.5 146 chr3L 606875 intergenic Reg-2 - chr3L 606948 intergenic Reg-2 - chr3L 607021 intergenic Reg-2 - chr3L_14_605001 chr3L_605001 RAL-177 1242 chr3L 608439 608491 chr3L 608625 608676 11 185 3.5 3.5 3.5 2.4 237 chr3L 608439 intergenic not near genes chr3L 608558 intergenic not near genes chr3L 608676 intergenic not near genes chr3L_11_605001 chr3L_605001 RAL-177 1243 chr3L 642455 642464 chr3L 642566 642575 4 111 10.5 9.5 10.0 0.4 120 chr3L 642455 5` UTR CR43334 + chr3L 642515 5` UTR CR43334 + chr3L 642575 5` UTR CR43334 + chr3L_4_640001 chr3L_640001 RAL-177 1244 chr3L 642466 642500 chr3L 642565 642602 10 108 6.0 8.5 7.2 1.2 136 chr3L 642466 5` UTR CR43334 + chr3L 642534 5` UTR CR43334 + chr3L 642602 5` UTR CR43334 + chr3L_10_640001 chr3L_640001 RAL-177 1245 chr3L 651367 651424 chr3L 651475 651512 22 104 4.0 2.5 3.2 5.2 145 chr3L 651367 intergenic Gale +,CG3402 - chr3L 651440 intergenic CG3402 -,Gale + chr3L 651512 intergenic CG3402 -,Gale + chr3L_22_650001 chr3L_650001 RAL-177 1246 chr3L 740456 740498 chr3L 740557 740578 10 99 3.5 8.0 5.8 1.5 122 chr3L 740456 intron hng3 - chr3L 740517 intron hng3 - chr3L 740578 intron hng3 - chr3L_10_740001 chr3L_740001 RAL-177 1247 chr3L 767799 767851 chr3L 767907 767959 9 107 2.5 1.5 2.0 3.0 160 chr3L 767799 intergenic not near genes chr3L 767879 intergenic not near genes chr3L 767959 intergenic not near genes chr3L_9_765001 chr3L_765001 RAL-177 1248 chr3L 789893 789947 chr3L 790398 790452 roo 15 505 3.5 1.5 2.5 4.3 559 chr3L 789893 intergenic not near genes chr3L 790172 intergenic not near genes chr3L 790452 intergenic not near genes chr3L_15_790001 chr3L_790001 RAL-177 1249 chr3L 824022 824034 chr3L 824124 824136 8 102 9.5 0.0 4.8 1.4 114 chr3L 824022 intergenic not near genes chr3L 824079 intergenic not near genes chr3L 824136 intergenic not near genes chr3L_8_820001 chr3L_820001 RAL-177 1250 chr3L 858011 858028 chr3L 866481 866483 Tirant 4 8470 8.0 4.5 6.2 0.6 8472 chr3L 858011 intergenic not near genes chr3L 862247 intergenic not near genes chr3L 866483 intergenic CG12502 + chr3L_4_860001 chr3L_860001 RAL-177 1251 chr3L 925156 925207 chr3L 932602 932653 mdg1 25 7441 6.0 6.0 6.0 3.6 7497 chr3L 925156 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932653 intron Glut1 + chr3L_25_925001 chr3L_925001 RAL-177 1252 chr3L 933911 933944 chr3L 934034 934067 14 123 4.0 9.0 6.5 1.9 156 chr3L 933911 intron Glut1 + chr3L 933989 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_14_930001 chr3L_930001 RAL-177 1253 chr3L 939764 939799 chr3L 940905 940929 jockey 14 1140 3.0 8.0 5.5 2.2 1165 chr3L 939764 intron Glut1 + chr3L 940346 intron Glut1 + chr3L 940929 intron Glut1 + chr3L_14_940001 chr3L_940001 RAL-177 1254 chr3L 1010980 1011008 chr3L 1011081 1011109 6 100 5.0 3.5 4.2 1.2 129 chr3L 1010980 intron trio - chr3L 1011044 intron trio - chr3L 1011109 intron trio - chr3L_6_1010001 chr3L_1010001 RAL-177 1255 chr3L 1011010 1011028 chr3L 1011078 1011129 12 92 2.5 3.5 3.0 3.0 119 chr3L 1011010 intron trio - chr3L 1011070 intron trio - chr3L 1011129 intron trio - chr3L_12_1010001 chr3L_1010001 RAL-177 1256 chr3L 1103971 1104003 chr3L 1104182 1104214 6 210 5.5 4.0 4.8 1.0 243 chr3L 1103971 intergenic not near genes chr3L 1104092 intergenic not near genes chr3L 1104214 intergenic not near genes chr3L_6_1100001 chr3L_1100001 RAL-177 1257 chr3L 1154112 1154161 chr3L 1163282 1163331 roo 10 9170 2.0 1.5 1.8 3.6 9219 chr3L 1154112 intron bab2 - chr3L 1158722 intron bab2 - chr3L 1163331 intron bab2 - chr3L_10_1155001 chr3L_1155001 RAL-177 1258 chr3L 1195350 1195397 chr3L 1195574 1195621 13 223 0.0 0.0 0.0 13.0 271 chr3L 1195350 intergenic LysX - chr3L 1195486 intergenic LysX - chr3L 1195621 intergenic LysX - chr3L_13_1195001 chr3L_1195001 RAL-177 1259 chr3L 1195663 1195709 chr3L 20525229 20525230 5 19329547 0.0 27.5 13.8 0.3 19329567 chr3L 1195663 intergenic LysX - chr3L 10860446 intron tna + chr3L 20525230 intron CG4825 - chr3L_5_10860001 chr3L_10860001 RAL-177 1260 chr3L 1214195 1214243 chr3L 1214292 1214340 9 96 7.5 0.5 4.0 1.8 145 chr3L 1214195 intron mwh + chr3L 1214268 intron mwh + chr3L 1214340 intron mwh + chr3L_9_1210001 chr3L_1210001 RAL-177 1261 chr3L 1219594 1219625 chr3L 1227347 1227358 412 5 7746 6.0 8.0 7.0 0.6 7764 chr3L 1219594 intron mwh + chr3L 1223476 intron mwh + chr3L 1227358 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-177 1262 chr3L 1257627 1257656 chr3L 1257727 1257756 11 100 0.0 6.5 3.2 2.6 129 chr3L 1257627 intron CG9134 + chr3L 1257692 intron CG9134 + chr3L 1257756 intron CG9134 + chr3L_11_1255001 chr3L_1255001 RAL-177 1263 chr3L 1310982 1311009 chr3L 1315837 1315864 7 4858 20.5 31.5 26.0 0.3 4882 chr3L 1310982 exon CG2469 + chr3L 1313423 intergenic CG9186 -,CG9153 + chr3L 1315864 exon CG9153 + chr3L_7_1310001 chr3L_1310001 RAL-177 1264 chr3L 1364014 1364064 chr3L 1364120 1364170 6 102 0.0 3.0 1.5 2.4 156 chr3L 1364014 intron Ptp61F - chr3L 1364092 intron Ptp61F - chr3L 1364170 intron Ptp61F - chr3L_6_1360001 chr3L_1360001 RAL-177 1265 chr3L 1389961 1390005 chr3L 1390059 1390094 14 95 3.5 5.5 4.5 2.5 133 chr3L 1389961 intron Ptp61F - chr3L 1390028 intron Ptp61F - chr3L 1390094 intron Ptp61F - chr3L_14_1390001 chr3L_1390001 RAL-177 1266 chr3L 1396735 1396757 chr3L 1396835 1396857 8 100 14.5 14.0 14.2 0.5 122 chr3L 1396735 intron Ptp61F - chr3L 1396796 intron Ptp61F - chr3L 1396857 intron Ptp61F - chr3L_8_1395001 chr3L_1395001 RAL-177 1267 chr3L 1454227 1454267 chr3L 1454324 1454353 15 96 6.5 5.0 5.8 2.2 126 chr3L 1454227 intron Ptp61F - chr3L 1454290 intron Ptp61F - chr3L 1454353 intron Ptp61F - chr3L_15_1450001 chr3L_1450001 RAL-177 1268 chr3L 1485717 1485733 chr3L 1486908 1486909 1360 4 1186 8.5 9.5 9.0 0.4 1192 chr3L 1485717 intron stet - chr3L 1486313 intron stet - chr3L 1486909 intron stet - chr3L_4_1485001 chr3L_1485001 RAL-177 1269 chr3L 1505998 1506005 chr3L 1513607 1513622 17.6 4 7614 16.5 9.0 12.8 0.3 7624 chr3L 1505998 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513622 intron,intron Psa +,cue - chr3L_4_1505001 chr3L_1505001 RAL-177 1270 chr3L 1506010 1506024 chr3L 1513602 1513631 17.6 5 7610 12.0 9.0 10.5 0.4 7621 chr3L 1506010 intron,intron Psa +,cue - chr3L 1509820 intron,intron Psa +,cue - chr3L 1513631 intron,intron Psa +,cue - chr3L_5_1505001 chr3L_1505001 RAL-177 1271 chr3L 1569509 1569531 chr3L 1569605 1569627 5 96 2.0 9.5 5.8 0.7 118 chr3L 1569509 5` UTR CG12004 + chr3L 1569568 intron CG12004 + chr3L 1569627 intron CG12004 + chr3L_5_1565001 chr3L_1565001 RAL-177 1272 chr3L 1584118 1584124 chr3L 1584220 1584226 4 102 0.0 4.5 2.2 1.2 108 chr3L 1584118 intron CG13917 + chr3L 1584172 intron CG13917 + chr3L 1584226 intron CG13917 + chr3L_4_1580001 chr3L_1580001 RAL-177 1273 chr3L 1585915 1585936 chr3L 1586016 1586037 8 101 4.5 0.0 2.2 2.5 122 chr3L 1585915 intron CG13917 + chr3L 1585976 intron CG13917 + chr3L 1586037 intron CG13917 + chr3L_8_1585001 chr3L_1585001 RAL-177 1274 chr3L 1666535 1666555 chr3L 1666714 1666715 4 165 0.0 26.0 13.0 0.3 180 chr3L 1666535 3` UTR,intron CG7974 +,Uhg7 - chr3L 1666625 intron Uhg7 - chr3L 1666715 intron,3` UTR Uhg7 -,snoRNA:Me28S-A2634b - chr3L_4_1665001 chr3L_1665001 RAL-177 1275 chr3L 1728500 1728549 chr3L 1728604 1728654 4 105 3.0 2.0 2.5 1.1 154 chr3L 1728500 intron drpr - chr3L 1728577 intron drpr - chr3L 1728654 intron drpr - chr3L_4_1725001 chr3L_1725001 RAL-177 1276 chr3L 1740844 1740878 chr3L 1741107 1741142 pogo 9 256 7.0 7.0 7.0 1.1 298 chr3L 1740844 intron Gk + chr3L 1740993 intron Gk + chr3L 1741142 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-177 1277 chr3L 1805678 1805712 chr3L 1805872 1805896 13 193 2.5 4.0 3.2 3.1 218 chr3L 1805678 exon CG42676 + chr3L 1805787 intron CG42676 + chr3L 1805896 intron CG42676 + chr3L_13_1805001 chr3L_1805001 RAL-177 1278 chr3L 1853029 1853042 chr3L 1853133 1853146 4 104 4.5 4.5 4.5 0.7 117 chr3L 1853029 intron CG13936 - chr3L 1853088 intron CG13936 - chr3L 1853146 intron CG13936 - chr3L_4_1850001 chr3L_1850001 RAL-177 1279 chr3L 1879111 1879139 chr3L 1879209 1879237 14 98 5.0 0.5 2.8 3.7 126 chr3L 1879111 intron CG13937 - chr3L 1879174 intron CG13937 - chr3L 1879237 intron CG13937 - chr3L_14_1875001 chr3L_1875001 RAL-177 1280 chr3L 1882365 1882379 chr3L 1882478 1882493 6 114 5.0 3.0 4.0 1.2 128 chr3L 1882365 intron CG13937 - chr3L 1882429 intron CG13937 - chr3L 1882493 intron CG13937 - chr3L_6_1880001 chr3L_1880001 RAL-177 1281 chr3L 1885163 1885184 chr3L 1885258 1885284 10 99 1.0 3.5 2.2 3.1 121 chr3L 1885163 intergenic Aprt -,Tmhs + chr3L 1885224 intergenic Aprt -,Tmhs + chr3L 1885284 intergenic Aprt -,Tmhs + chr3L_10_1885001 chr3L_1885001 RAL-177 1282 chr3L 1991097 1991153 chr3L 1991196 1991220 15 91 6.0 2.5 4.2 2.9 123 chr3L 1991097 intergenic not near genes chr3L 1991158 intergenic not near genes chr3L 1991220 intergenic not near genes chr3L_15_1990001 chr3L_1990001 RAL-177 1283 chr3L 2108219 2108283 chr3L 2113453 2113507 copia 18 5230 0.5 4.0 2.2 5.6 5288 chr3L 2108219 intron sls - chr3L 2110863 intron sls - chr3L 2113507 intron sls - chr3L_18_2110001 chr3L_2110001 RAL-177 1284 chr3L 2139185 2139228 chr3L 2139286 2139329 20 101 7.0 5.0 6.0 2.9 144 chr3L 2139185 intron zormin - chr3L 2139257 intron zormin - chr3L 2139329 intron zormin - chr3L_20_2135001 chr3L_2135001 RAL-177 1285 chr3L 2168757 2168801 chr3L 2168868 2168912 16 111 4.5 5.0 4.8 2.8 155 chr3L 2168757 exon CG15879 - chr3L 2168834 intron CG15879 - chr3L 2168912 intron CG15879 - chr3L_16_2165001 chr3L_2165001 RAL-177 1286 chr3L 2182014 2182018 chr3L 6061839 6061843 5 3879825 3.5 8.0 5.8 0.7 3879829 chr3L 2182014 intergenic not near genes chr3L 4121928 intron Chd64 - chr3L 6061843 intron CG10472 - chr3L_5_4120001 chr3L_4120001 RAL-177 1287 chr3L 2199795 2199821 chr3L 2199891 2199917 9 96 0.5 5.5 3.0 2.2 122 chr3L 2199795 intergenic not near genes chr3L 2199856 intergenic not near genes chr3L 2199917 intergenic not near genes chr3L_9_2195001 chr3L_2195001 RAL-177 1288 chr3L 2279016 2279069 chr3L 2279187 2279236 11 167 0.0 2.5 1.2 5.0 220 chr3L 2279016 intergenic not near genes chr3L 2279126 intergenic not near genes chr3L 2279236 intergenic not near genes chr3L_11_2275001 chr3L_2275001 RAL-177 1289 chr3L 2307982 2308022 chr3L 2308108 2308130 14 122 7.5 2.5 5.0 2.3 148 chr3L 2307982 intergenic not near genes chr3L 2308056 intergenic not near genes chr3L 2308130 intergenic not near genes chr3L_14_2305001 chr3L_2305001 RAL-177 1290 chr3L 2310517 2310552 chr3L 2310659 2310694 14 139 3.5 7.0 5.2 2.3 177 chr3L 2310517 intergenic not near genes chr3L 2310606 intergenic not near genes chr3L 2310694 intergenic not near genes chr3L_14_2310001 chr3L_2310001 RAL-177 1291 chr3L 2321137 2321187 chr3L 2321234 2321274 11 96 3.0 3.5 3.2 2.6 137 chr3L 2321137 intergenic not near genes chr3L 2321206 intergenic not near genes chr3L 2321274 intergenic not near genes chr3L_11_2320001 chr3L_2320001 RAL-177 1292 chr3L 2331562 2331587 chr3L 2331659 2331684 6 96 6.0 2.0 4.0 1.2 122 chr3L 2331562 intron MsR1 + chr3L 2331623 intron MsR1 + chr3L 2331684 intron MsR1 + chr3L_6_2330001 chr3L_2330001 RAL-177 1293 chr3L 2331596 2331614 chr3L 2331658 2331711 9 92 3.0 2.0 2.5 2.6 115 chr3L 2331596 intron MsR1 + chr3L 2331654 intron MsR1 + chr3L 2331711 intron MsR1 + chr3L_9_2330001 chr3L_2330001 RAL-177 1294 chr3L 2380329 2380373 chr3L 2380417 2380470 14 96 5.0 7.0 6.0 2.0 141 chr3L 2380329 intergenic not near genes chr3L 2380400 intergenic not near genes chr3L 2380470 intergenic not near genes chr3L_14_2380001 chr3L_2380001 RAL-177 1295 chr3L 2411315 2411334 chr3L 2411415 2411416 4 94 1.5 1.5 1.5 1.6 101 chr3L 2411315 intron CG45186 + chr3L 2411366 intron CG45186 + chr3L 2411416 intron CG45186 + chr3L_4_2410001 chr3L_2410001 RAL-177 1296 chr3L 2447486 2447530 chr3L 2456662 2456696 roo 8 9174 2.0 3.5 2.8 2.1 9210 chr3L 2447486 intron CG45186 + chr3L 2452091 intron CG45186 + chr3L 2456696 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-177 1297 chr3L 2533654 2533672 chr3L 2533734 2533763 13 91 3.5 11.5 7.5 1.5 109 chr3L 2533654 intron Spn - chr3L 2533708 intron Spn - chr3L 2533763 intron Spn - chr3L_13_2530001 chr3L_2530001 RAL-177 1298 chr3L 2534616 2534633 chr3L 2534719 2534736 5 103 0.0 11.5 5.8 0.7 120 chr3L 2534616 intron Spn - chr3L 2534676 intron Spn - chr3L 2534736 exon Spn - chr3L_5_2530001 chr3L_2530001 RAL-177 1299 chr3L 2561507 2561557 chr3L 2561604 2561634 15 93 5.5 8.0 6.8 1.9 127 chr3L 2561507 intron msn - chr3L 2561570 intron msn - chr3L 2561634 intron msn - chr3L_15_2560001 chr3L_2560001 RAL-177 1300 chr3L 2581880 2581914 chr3L 2581994 2582028 12 114 1.5 4.5 3.0 3.0 148 chr3L 2581880 intron msn - chr3L 2581954 intron msn - chr3L 2582028 intron msn - chr3L_12_2580001 chr3L_2580001 RAL-177 1301 chr3L 2609660 2609678 chr3L 2609756 2609774 6 96 4.0 1.0 2.5 1.7 114 chr3L 2609660 intron Pxn - chr3L 2609717 intron Pxn - chr3L 2609774 intron Pxn - chr3L_6_2605001 chr3L_2605001 RAL-177 1302 chr3L 2683925 2683976 chr3L 2684021 2684072 20 96 6.0 7.0 6.5 2.7 147 chr3L 2683925 intron Fife - chr3L 2683998 intron Fife - chr3L 2684072 intron Fife - chr3L_20_2680001 chr3L_2680001 RAL-177 1303 chr3L 2751442 2751458 chr3L 2755757 2755773 F-element 4 4314 15.0 9.5 12.2 0.3 4331 chr3L 2751442 intron Mrtf - chr3L 2753608 intron Mrtf - chr3L 2755773 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RAL-177 1304 chr3L 2795704 2795756 chr3L 2795847 2795899 15 143 5.0 5.5 5.2 2.4 195 chr3L 2795704 intron CG43444 - chr3L 2795802 intron CG43444 - chr3L 2795899 intron CG43444 - chr3L_15_2795001 chr3L_2795001 RAL-177 1305 chr3L 2810035 2810079 chr3L 2810165 2810209 17 129 2.5 3.0 2.8 4.5 174 chr3L 2810035 intron CG43444 - chr3L 2810122 intron CG43444 - chr3L 2810209 intron CG43444 - chr3L_17_2810001 chr3L_2810001 RAL-177 1306 chr3L 2835145 2835145 chr3L 17500201 17500202 4 14665056 15.0 19.5 17.2 0.2 14665057 chr3L 2835145 intron CG43444 - chr3L 10167674 intron dpr10 - chr3L 17500202 intron Oatp74D + chr3L_4_10165001 chr3L_10165001 RAL-177 1307 chr3L 2835861 2835869 chr3L 2835961 2835969 4 100 3.5 4.0 3.8 0.8 108 chr3L 2835861 intron CG43444 - chr3L 2835915 intron CG43444 - chr3L 2835969 intron CG43444 - chr3L_4_2835001 chr3L_2835001 RAL-177 1308 chr3L 2882096 2882143 chr3L 2882192 2882239 23 95 5.0 3.5 4.2 4.4 143 chr3L 2882096 intergenic not near genes chr3L 2882168 intergenic not near genes chr3L 2882239 intergenic not near genes chr3L_23_2880001 chr3L_2880001 RAL-177 1309 chr3L 2927821 2927872 chr3L 2936118 2936169 Tirant 6 8294 2.5 2.5 2.5 1.7 8348 chr3L 2927821 intron Shab + chr3L 2931995 intron Shab + chr3L 2936169 intron Shab + chr3L_6_2930001 chr3L_2930001 RAL-177 1310 chr3L 2966707 2966732 chr3L 2974152 2974176 mdg1 10 7444 9.0 5.0 7.0 1.2 7469 chr3L 2966707 intergenic not near genes chr3L 2970442 intergenic not near genes chr3L 2974176 intergenic not near genes chr3L_10_2970001 chr3L_2970001 RAL-177 1311 chr3L 2986176 2986206 chr3L 2986376 2986406 16 200 14.0 4.5 9.2 1.6 230 chr3L 2986176 intergenic not near genes chr3L 2986291 intergenic not near genes chr3L 2986406 intergenic not near genes chr3L_16_2985001 chr3L_2985001 RAL-177 1312 chr3L 3040309 3040322 chr3L 3042118 3042131 S-element 5 1809 13.0 2.0 7.5 0.6 1822 chr3L 3040309 3` UTR CG2162 + chr3L 3041220 intergenic not near genes chr3L 3042131 intergenic Jafrac2 + chr3L_5_3040001 chr3L_3040001 RAL-177 1313 chr3L 3051726 3051749 chr3L 3051988 3052011 pogo 13 261 8.5 2.0 5.2 2.1 285 chr3L 3051726 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_13_3050001 chr3L_3050001 RAL-177 1314 chr3L 3057243 3057277 chr3L 3057399 3057441 11 163 2.0 7.0 4.5 2.0 198 chr3L 3057243 exon CG32486 - chr3L 3057342 intron CG32486 - chr3L 3057441 exon CG32486 - chr3L_11_3055001 chr3L_3055001 RAL-177 1315 chr3L 3060412 3060457 chr3L 3060579 3060624 11 158 2.5 3.0 2.8 2.9 212 chr3L 3060412 intron CG32486 - chr3L 3060518 intron CG32486 - chr3L 3060624 intron CG32486 - chr3L_11_3060001 chr3L_3060001 RAL-177 1316 chr3L 3061296 3061313 chr3L 3069894 3069909 Tirant 5 8600 0.5 9.0 4.8 0.9 8613 chr3L 3061296 intron CG32486 - chr3L 3065602 intron CG32486 - chr3L 3069909 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-177 1317 chr3L 3128173 3128216 chr3L 3128279 3128322 16 104 1.0 3.0 2.0 5.3 149 chr3L 3128173 intergenic prominin-like - chr3L 3128248 intergenic not near genes chr3L 3128322 intergenic not near genes chr3L_16_3125001 chr3L_3125001 RAL-177 1318 chr3L 3165328 3165380 chr3L 3165431 3165483 15 103 3.5 5.0 4.2 2.9 155 chr3L 3165328 intron,intron Asciz -,CG32280 + chr3L 3165406 intron,intron Asciz -,CG32280 + chr3L 3165483 intron,intron Asciz -,CG32280 + chr3L_15_3165001 chr3L_3165001 RAL-177 1319 chr3L 3178709 3178748 chr3L 3178812 3178851 5 97 4.5 0.0 2.2 1.6 142 chr3L 3178709 intergenic CG14964 -,Girdin + chr3L 3178780 intergenic Girdin +,CG14964 - chr3L 3178851 intergenic Girdin +,CG14964 - chr3L_5_3175001 chr3L_3175001 RAL-177 1320 chr3L 3252320 3252370 chr3L 3252416 3252466 6 96 3.5 0.5 2.0 2.0 146 chr3L 3252320 5` UTR CR43626 + chr3L 3252393 5` UTR CR43626 + chr3L 3252466 5` UTR CR43626 + chr3L_6_3250001 chr3L_3250001 RAL-177 1321 chr3L 3259800 3259833 chr3L 3259920 3259953 11 120 3.5 5.0 4.2 2.1 153 chr3L 3259800 intron ckd + chr3L 3259876 intron ckd + chr3L 3259953 intron ckd + chr3L_11_3255001 chr3L_3255001 RAL-177 1322 chr3L 3269084 3269124 chr3L 3269195 3269235 6 111 0.0 2.0 1.0 3.0 151 chr3L 3269084 intergenic CG34265 + chr3L 3269160 intergenic CG34265 + chr3L 3269235 intergenic CG34265 + chr3L_6_3265001 chr3L_3265001 RAL-177 1323 chr3L 3281442 3281475 chr3L 3281932 3281990 Doc 7 507 0.5 4.5 2.5 2.0 548 chr3L 3281442 intron CG12017 + chr3L 3281716 intron CG12017 + chr3L 3281990 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-177 1324 chr3L 3473366 3473376 chr3L 3473539 3473572 4 181 7.5 5.0 6.2 0.6 206 chr3L 3473366 intron CG42324 + chr3L 3473469 intron CG42324 + chr3L 3473572 intron CG42324 + chr3L_4_3470001 chr3L_3470001 RAL-177 1325 chr3L 3475058 3475097 chr3L 3475522 3475547 jockey 13 460 4.0 1.5 2.8 3.4 489 chr3L 3475058 intron CG42324 + chr3L 3475302 intron CG42324 + chr3L 3475547 intron CG42324 + chr3L_13_3475001 chr3L_3475001 RAL-177 1326 chr3L 3484393 3484446 chr3L 3484490 3484535 15 95 3.5 4.5 4.0 3.0 142 chr3L 3484393 intron,intron CG42324 +,CG43074 - chr3L 3484464 intron,exon CG42324 +,CG43074 - chr3L 3484535 intron,intron CG42324 +,CG43074 - chr3L_15_3480001 chr3L_3480001 RAL-177 1327 chr3L 3494177 3494190 chr3L 3494274 3494287 6 97 1.5 4.0 2.8 1.6 110 chr3L 3494177 intron CG42324 + chr3L 3494232 intron CG42324 + chr3L 3494287 intron CG42324 + chr3L_6_3490001 chr3L_3490001 RAL-177 1328 chr3L 3494764 3494777 chr3L 3494828 3494875 5 88 4.0 3.5 3.8 1.0 111 chr3L 3494764 intron CG42324 + chr3L 3494820 intron CG42324 + chr3L 3494875 intron CG42324 + chr3L_5_3490001 chr3L_3490001 RAL-177 1329 chr3L 3601283 3601323 chr3L 3606614 3606654 copia 8 5331 3.5 2.5 3.0 2.0 5371 chr3L 3601283 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606654 intron Eip63E + chr3L_8_3600001 chr3L_3600001 RAL-177 1330 chr3L 3622307 3622360 chr3L 3622562 3622617 21 256 5.5 6.0 5.8 3.1 310 chr3L 3622307 intergenic not near genes chr3L 3622462 intergenic not near genes chr3L 3622617 intergenic not near genes chr3L_21_3620001 chr3L_3620001 RAL-177 1331 chr3L 3656444 3656453 chr3L 3656548 3656557 7 103 8.0 12.5 10.2 0.6 113 chr3L 3656444 intergenic not near genes chr3L 3656500 intergenic not near genes chr3L 3656557 intergenic not near genes chr3L_7_3655001 chr3L_3655001 RAL-177 1332 chr3L 3726395 3726434 chr3L 3726524 3726528 10 123 2.5 0.0 1.2 4.5 133 chr3L 3726395 intron CG32264 - chr3L 3726462 intron CG32264 - chr3L 3726528 intron CG32264 - chr3L_10_3725001 chr3L_3725001 RAL-177 1333 chr3L 3766719 3766759 chr3L 3766825 3766855 11 105 5.0 0.0 2.5 3.1 136 chr3L 3766719 intron CG32264 - chr3L 3766787 intron CG32264 - chr3L 3766855 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-177 1334 chr3L 3783252 3783286 chr3L 3783347 3783366 13 94 4.5 5.0 4.8 2.2 114 chr3L 3783252 intron CG32264 - chr3L 3783309 intron CG32264 - chr3L 3783366 intron CG32264 - chr3L_13_3780001 chr3L_3780001 RAL-177 1335 chr3L 3795579 3795585 chr3L 3795676 3795682 4 97 7.0 4.0 5.5 0.6 103 chr3L 3795579 intron CG32264 - chr3L 3795630 intron CG32264 - chr3L 3795682 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-177 1336 chr3L 3795586 3795624 chr3L 3795671 3795700 16 95 3.0 4.0 3.5 3.6 114 chr3L 3795586 intron CG32264 - chr3L 3795643 intron CG32264 - chr3L 3795700 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-177 1337 chr3L 3797220 3797227 chr3L 3797323 3797330 5 103 3.5 2.5 3.0 1.2 110 chr3L 3797220 intron CG32264 - chr3L 3797275 intron CG32264 - chr3L 3797330 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-177 1338 chr3L 3797228 3797264 chr3L 3797321 3797367 16 100 3.5 2.5 3.0 4.0 139 chr3L 3797228 intron CG32264 - chr3L 3797298 intron CG32264 - chr3L 3797367 intron CG32264 - chr3L_16_3795001 chr3L_3795001 RAL-177 1339 chr3L 3815037 3815080 chr3L 3815138 3815181 13 101 3.5 3.0 3.2 3.1 144 chr3L 3815037 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815109 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815181 intron,intron Scsalpha +,CR43932 - chr3L_13_3815001 chr3L_3815001 RAL-177 1340 chr3L 3827646 3827690 chr3L 3827761 3827805 12 112 5.5 1.5 3.5 2.7 159 chr3L 3827646 intron,intron enc +,Rdh + chr3L 3827726 intron,intron enc +,Rdh + chr3L 3827805 intron,intron enc +,Rdh + chr3L_12_3825001 chr3L_3825001 RAL-177 1341 chr3L 3833717 3833759 chr3L 3833978 3834015 pogo 12 260 4.5 3.0 3.8 2.5 298 chr3L 3833717 intron enc + chr3L 3833866 intron enc + chr3L 3834015 intron enc + chr3L_12_3830001 chr3L_3830001 RAL-177 1342 chr3L 3877443 3877468 chr3L 3877586 3877611 11 143 0.0 1.5 0.8 6.1 168 chr3L 3877443 intergenic not near genes chr3L 3877527 intergenic not near genes chr3L 3877611 intergenic not near genes chr3L_11_3875001 chr3L_3875001 RAL-177 1343 chr3L 3889125 3889138 chr3L 3889228 3889241 7 103 0.0 7.5 3.8 1.5 116 chr3L 3889125 intergenic not near genes chr3L 3889183 intergenic not near genes chr3L 3889241 intergenic not near genes chr3L_7_3885001 chr3L_3885001 RAL-177 1344 chr3L 3914159 3914208 chr3L 3914264 3914313 21 103 3.0 2.5 2.8 5.5 154 chr3L 3914159 intron Eip63F-1 - chr3L 3914236 intron Eip63F-1 - chr3L 3914313 intron Eip63F-1 - chr3L_21_3910001 chr3L_3910001 RAL-177 1345 chr3L 3952051 3952099 chr3L 3952147 3952180 10 88 5.0 3.0 4.0 2.0 129 chr3L 3952051 intron CG14984 - chr3L 3952116 intron CG14984 - chr3L 3952180 intron CG14984 - chr3L_10_3950001 chr3L_3950001 RAL-177 1346 chr3L 4164780 4164785 chr3L 4164876 4164881 5 95 5.5 1.0 3.2 1.2 101 chr3L 4164780 exon mas - chr3L 4164830 intron mas - chr3L 4164881 intron mas - chr3L_5_4160001 chr3L_4160001 RAL-177 1347 chr3L 4164786 4164793 chr3L 4164875 4164888 5 92 5.0 1.0 3.0 1.2 102 chr3L 4164786 exon mas - chr3L 4164837 intron mas - chr3L 4164888 exon mas - chr3L_5_4160001 chr3L_4160001 RAL-177 1348 chr3L 4170147 4170160 chr3L 4170238 4170258 5 97 1.0 2.0 1.5 2.0 111 chr3L 4170147 intergenic Ero1L + chr3L 4170202 intergenic Ero1L + chr3L 4170258 intergenic Ero1L + chr3L_5_4170001 chr3L_4170001 RAL-177 1349 chr3L 4195158 4195168 chr3L 4195282 4195291 4 121 1.5 12.0 6.8 0.5 133 chr3L 4195158 exon CG43367 + chr3L 4195224 intron CG43367 + chr3L 4195291 intron CG43367 + chr3L_4_4195001 chr3L_4195001 RAL-177 1350 chr3L 4328734 4328756 chr3L 4336251 4336273 412 17 7516 4.0 5.0 4.5 3.1 7539 chr3L 4328734 intron Cip4 - chr3L 4332504 intron Cip4 - chr3L 4336273 exon Cip4 - chr3L_17_4330001 chr3L_4330001 RAL-177 1351 chr3L 4337581 4337592 chr3L 4337679 4337721 5 120 2.5 3.5 3.0 1.2 140 chr3L 4337581 intron Cip4 - chr3L 4337651 intron Cip4 - chr3L 4337721 intron Cip4 - chr3L_5_4335001 chr3L_4335001 RAL-177 1352 chr3L 4344872 4344877 chr3L 4344999 4345004 5 127 4.5 0.0 2.2 1.6 132 chr3L 4344872 intron Cip4 - chr3L 4344938 intron Cip4 - chr3L 4345004 intron Cip4 - chr3L_5_4340001 chr3L_4340001 RAL-177 1353 chr3L 4384885 4384925 chr3L 4384998 4385038 16 113 3.0 11.5 7.2 2.0 153 chr3L 4384885 5` UTR slow + chr3L 4384962 intron slow + chr3L 4385038 intron slow + chr3L_16_4380001 chr3L_4380001 RAL-177 1354 chr3L 4422330 4422380 chr3L 4422426 4422448 18 94 1.5 5.0 3.2 4.3 118 chr3L 4422330 intron CG15020 + chr3L 4422389 intron CG15020 + chr3L 4422448 intron CG15020 + chr3L_18_4420001 chr3L_4420001 RAL-177 1355 chr3L 4429512 4429555 chr3L 4429608 4429651 17 95 2.5 4.5 3.5 3.8 139 chr3L 4429512 intron nAChRbeta1 + chr3L 4429582 5` UTR nAChRbeta1 + chr3L 4429651 5` UTR nAChRbeta1 + chr3L_17_4425001 chr3L_4425001 RAL-177 1356 chr3L 4477591 4477606 chr3L 4478147 4478166 5 560 21.5 19.5 20.5 0.2 575 chr3L 4477591 intergenic not near genes chr3L 4477878 intergenic not near genes chr3L 4478166 intergenic not near genes chr3L_5_4475001 chr3L_4475001 RAL-177 1357 chr3L 4477582 4477601 chr3L 4478168 4478183 4 573 21.5 19.5 20.5 0.2 601 chr3L 4477582 intergenic not near genes chr3L 4477882 intergenic not near genes chr3L 4478183 intergenic not near genes chr3L_4_4475001 chr3L_4475001 RAL-177 1358 chr3L 4553851 4553867 chr3L 4553966 4553986 4 120 0.0 4.5 2.2 1.2 135 chr3L 4553851 intergenic CG11357 + chr3L 4553918 intergenic CG11357 + chr3L 4553986 intergenic not near genes chr3L_4_4550001 chr3L_4550001 RAL-177 1359 chr3L 4554134 4554147 chr3L 4554291 4554301 4 156 3.5 2.5 3.0 1.0 167 chr3L 4554134 intergenic CG33777 - chr3L 4554218 intergenic CG33777 - chr3L 4554301 intergenic CG33777 - chr3L_4_4550001 chr3L_4550001 RAL-177 1360 chr3L 4607245 4607289 chr3L 4607356 4607400 5 111 3.0 1.5 2.2 1.6 155 chr3L 4607245 intron Src64B - chr3L 4607322 intron Src64B - chr3L 4607400 intron Src64B - chr3L_5_4605001 chr3L_4605001 RAL-177 1361 chr3L 4638777 4638789 chr3L 4638899 4638912 4 123 2.0 6.5 4.2 0.8 135 chr3L 4638777 intron axo - chr3L 4638844 intron axo - chr3L 4638912 intron axo - chr3L_4_4635001 chr3L_4635001 RAL-177 1362 chr3L 4652550 4652601 chr3L 4652653 4652702 14 101 3.0 2.5 2.8 3.7 152 chr3L 4652550 intron axo - chr3L 4652626 intron axo - chr3L 4652702 intron axo - chr3L_14_4650001 chr3L_4650001 RAL-177 1363 chr3L 4676016 4676041 chr3L 4676117 4676142 4 101 6.5 1.0 3.8 0.8 126 chr3L 4676016 intron axo - chr3L 4676079 intron axo - chr3L 4676142 intron axo - chr3L_4_4675001 chr3L_4675001 RAL-177 1364 chr3L 4748685 4748725 chr3L 4748796 4748830 10 108 3.0 2.5 2.8 2.6 145 chr3L 4748685 intron RhoGEF64C + chr3L 4748758 intron RhoGEF64C + chr3L 4748830 intron RhoGEF64C + chr3L_10_4745001 chr3L_4745001 RAL-177 1365 chr3L 4858315 4858335 chr3L 4858391 4858445 7 99 3.5 4.5 4.0 1.4 130 chr3L 4858315 intergenic not near genes chr3L 4858380 intergenic not near genes chr3L 4858445 intergenic not near genes chr3L_7_4855001 chr3L_4855001 RAL-177 1366 chr3L 4901112 4901160 chr3L 4907322 4907370 diver 10 6210 3.0 6.0 4.5 1.8 6258 chr3L 4901112 intergenic CG13704 + chr3L 4904241 intergenic not near genes chr3L 4907370 intergenic not near genes chr3L_10_4900001 chr3L_4900001 RAL-177 1367 chr3L 4991371 4991417 chr3L 4991515 4991534 10 140 1.5 4.0 2.8 2.6 163 chr3L 4991371 intron Con - chr3L 4991452 intron Con - chr3L 4991534 intron Con - chr3L_10_4990001 chr3L_4990001 RAL-177 1368 chr3L 5003120 5003168 chr3L 5003226 5003274 13 101 2.0 3.0 2.5 3.7 154 chr3L 5003120 intron Con - chr3L 5003197 intron Con - chr3L 5003274 intron Con - chr3L_13_5000001 chr3L_5000001 RAL-177 1369 chr3L 5034141 5034184 chr3L 5043308 5043348 roo 15 9169 7.0 4.0 5.5 2.3 9207 chr3L 5034141 intron Con - chr3L 5038744 intron Con - chr3L 5043348 intron Con - chr3L_15_5035001 chr3L_5035001 RAL-177 1370 chr3L 5045440 5045471 chr3L 5050241 5050272 Doc 12 4799 3.0 4.5 3.8 2.5 4832 chr3L 5045440 intron Con - chr3L 5047856 intron Con - chr3L 5050272 intron Con - chr3L_12_5045001 chr3L_5045001 RAL-177 1371 chr3L 5066282 5066326 chr3L 5066401 5066445 10 115 2.5 3.5 3.0 2.5 163 chr3L 5066282 intron Con - chr3L 5066364 intron Con - chr3L 5066445 intron Con - chr3L_10_5065001 chr3L_5065001 RAL-177 1372 chr3L 5101178 5101231 chr3L 5101277 5101331 23 99 3.5 3.5 3.5 5.1 153 chr3L 5101178 intergenic not near genes chr3L 5101254 intergenic not near genes chr3L 5101331 intergenic not near genes chr3L_23_5100001 chr3L_5100001 RAL-177 1373 chr3L 5103593 5103633 chr3L 5103693 5103701 10 94 8.5 0.0 4.2 1.9 108 chr3L 5103593 intergenic not near genes chr3L 5103647 intergenic not near genes chr3L 5103701 intergenic not near genes chr3L_10_5100001 chr3L_5100001 RAL-177 1374 chr3L 5104463 5104509 chr3L 5124617 5124663 20 20152 4.5 3.5 4.0 4.0 20200 chr3L 5104463 intergenic not near genes chr3L 5114563 intergenic not near genes chr3L 5124663 intergenic not near genes chr3L_20_5110001 chr3L_5110001 RAL-177 1375 chr3L 5203084 5203116 chr3L 5203209 5203241 17 125 3.0 6.0 4.5 3.1 157 chr3L 5203084 intron shep - chr3L 5203162 intron shep - chr3L 5203241 intron shep - chr3L_17_5200001 chr3L_5200001 RAL-177 1376 chr3L 5223401 5223444 chr3L 5223503 5223536 5 88 1.5 3.0 2.2 1.6 135 chr3L 5223401 intron shep - chr3L 5223468 intron shep - chr3L 5223536 intron shep - chr3L_5_5220001 chr3L_5220001 RAL-177 1377 chr3L 5250074 5250110 chr3L 5250172 5250208 10 97 1.5 4.0 2.8 2.6 134 chr3L 5250074 intron shep - chr3L 5250141 intron shep - chr3L 5250208 intron shep - chr3L_10_5250001 chr3L_5250001 RAL-177 1378 chr3L 5261145 5261167 chr3L 5261244 5261266 6 99 6.0 1.5 3.8 1.2 121 chr3L 5261145 intron shep - chr3L 5261206 intron shep - chr3L 5261266 intron shep - chr3L_6_5260001 chr3L_5260001 RAL-177 1379 chr3L 5299153 5299171 chr3L 5306599 5306617 Quasimodo 8 7446 3.0 0.0 1.5 3.2 7464 chr3L 5299153 intergenic not near genes chr3L 5302885 intergenic not near genes chr3L 5306617 intergenic not near genes chr3L_8_5300001 chr3L_5300001 RAL-177 1380 chr3L 5306654 5306674 chr3L 5306763 5306779 6 109 0.0 1.5 0.8 3.3 125 chr3L 5306654 intergenic not near genes chr3L 5306716 intergenic not near genes chr3L 5306779 intergenic not near genes chr3L_6_5305001 chr3L_5305001 RAL-177 1381 chr3L 5327449 5327471 chr3L 5327554 5327576 8 105 4.0 3.0 3.5 1.8 127 chr3L 5327449 intergenic not near genes chr3L 5327512 intergenic not near genes chr3L 5327576 intergenic not near genes chr3L_8_5325001 chr3L_5325001 RAL-177 1382 chr3L 5339806 5339843 chr3L 5340070 5340106 6 260 6.5 3.5 5.0 1.0 300 chr3L 5339806 intergenic not near genes chr3L 5339956 intergenic not near genes chr3L 5340106 intergenic not near genes chr3L_6_5335001 chr3L_5335001 RAL-177 1383 chr3L 5388181 5388232 chr3L 5388525 5388571 12 343 2.5 4.0 3.2 2.9 390 chr3L 5388181 intergenic not near genes chr3L 5388376 intergenic not near genes chr3L 5388571 intergenic not near genes chr3L_12_5385001 chr3L_5385001 RAL-177 1384 chr3L 5537144 5537181 chr3L 5537271 5537308 9 120 2.5 5.5 4.0 1.8 164 chr3L 5537144 intergenic not near genes chr3L 5537226 intergenic not near genes chr3L 5537308 intergenic not near genes chr3L_9_5535001 chr3L_5535001 RAL-177 1385 chr3L 5537716 5537751 chr3L 5538070 5538113 jockey 11 357 0.0 9.0 4.5 2.0 397 chr3L 5537716 intergenic not near genes chr3L 5537914 intergenic CG10625 - chr3L 5538113 intergenic CG10625 - chr3L_11_5535001 chr3L_5535001 RAL-177 1386 chr3L 5561643 5561686 chr3L 5561745 5561788 10 102 4.5 4.0 4.2 1.9 145 chr3L 5561643 intergenic sinu -,Sucb - chr3L 5561716 3` UTR Sucb - chr3L 5561788 3` UTR Sucb - chr3L_10_5560001 chr3L_5560001 RAL-177 1387 chr3L 5666265 5666319 chr3L 5666377 5666407 8 106 0.0 1.5 0.8 4.4 142 chr3L 5666265 intron sif + chr3L 5666336 intron sif + chr3L 5666407 intron sif + chr3L_8_5665001 chr3L_5665001 RAL-177 1388 chr3L 5910011 5910033 chr3L 5910272 5910294 pogo 15 261 11.5 0.0 5.8 2.2 283 chr3L 5910011 intron CG13288 + chr3L 5910152 intron CG13288 + chr3L 5910294 intron CG13288 + chr3L_15_5910001 chr3L_5910001 RAL-177 1389 chr3L 5926320 5926347 chr3L 5926504 5926557 BS 8 201 6.0 4.5 5.2 1.3 237 chr3L 5926320 intron Vap-33B + chr3L 5926438 intron Vap-33B + chr3L 5926557 intron Vap-33B + chr3L_8_5925001 chr3L_5925001 RAL-177 1390 chr3L 5983813 5983866 chr3L 5983953 5984007 13 139 1.0 0.0 0.5 8.7 194 chr3L 5983813 3` UTR CR45439 - chr3L 5983910 intergenic CR45439 -,CR45440 - chr3L 5984007 intergenic CR45440 -,CR45439 - chr3L_13_5980001 chr3L_5980001 RAL-177 1391 chr3L 5987040 5987155 chr3L 5987121 5987264 10 103 0.0 0.0 0.0 10.0 224 chr3L 5987040 intergenic not near genes chr3L 5987152 intergenic not near genes chr3L 5987264 intergenic not near genes chr3L_10_5985001 chr3L_5985001 RAL-177 1392 chr3L 6001670 6001717 chr3L 6004390 6004437 jockey 10 2719 3.0 4.0 3.5 2.2 2767 chr3L 6001670 intron PVRAP + chr3L 6003054 intron PVRAP + chr3L 6004437 intron PVRAP + chr3L_10_6000001 chr3L_6000001 RAL-177 1393 chr3L 6040345 6040394 chr3L 6042721 6042770 Doc 15 2375 7.0 7.0 7.0 1.9 2425 chr3L 6040345 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042770 intergenic not near genes chr3L_15_6040001 chr3L_6040001 RAL-177 1394 chr3L 6052637 6052660 chr3L 6052739 6052749 6 100 7.5 9.0 8.2 0.7 112 chr3L 6052637 exon Jon65Aii + chr3L 6052693 intron Jon65Aii + chr3L 6052749 exon Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-177 1395 chr3L 6077765 6077806 chr3L 6077865 6077906 4 100 2.0 0.0 1.0 2.0 141 chr3L 6077765 intron ssp6 + chr3L 6077836 intron ssp6 + chr3L 6077906 intron ssp6 + chr3L_4_6075001 chr3L_6075001 RAL-177 1396 chr3L 6102933 6102964 chr3L 6103036 6103067 12 103 6.5 0.5 3.5 2.7 134 chr3L 6102933 intron Ets65A + chr3L 6103000 intron Ets65A + chr3L 6103067 intron Ets65A + chr3L_12_6100001 chr3L_6100001 RAL-177 1397 chr3L 6116675 6116726 chr3L 6116779 6116830 16 103 2.0 2.5 2.2 5.0 155 chr3L 6116675 intron Ets65A + chr3L 6116752 intron Ets65A + chr3L 6116830 intron Ets65A + chr3L_16_6115001 chr3L_6115001 RAL-177 1398 chr3L 6119122 6119160 chr3L 6119219 6119257 14 97 4.5 0.0 2.2 4.4 135 chr3L 6119122 exon Ets65A + chr3L 6119190 intron Ets65A + chr3L 6119257 intron Ets65A + chr3L_14_6115001 chr3L_6115001 RAL-177 1399 chr3L 6220897 6220942 chr3L 6230064 6230108 roo 13 9170 4.0 2.0 3.0 3.2 9211 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225502 intergenic not near genes chr3L 6230108 intergenic not near genes chr3L_13_6225001 chr3L_6225001 RAL-177 1400 chr3L 6325332 6325383 chr3L 6325440 6325486 10 103 0.0 0.0 0.0 10.0 154 chr3L 6325332 intergenic Or65b + chr3L 6325409 intergenic Or65b + chr3L 6325486 intergenic Or65b + chr3L_10_6325001 chr3L_6325001 RAL-177 1401 chr3L 6334990 6335025 chr3L 6335481 6335516 297 13 489 6.0 6.0 6.0 1.9 526 chr3L 6334990 intron CG13300 - chr3L 6335253 intron CG13300 - chr3L 6335516 intron CG13300 - chr3L_13_6335001 chr3L_6335001 RAL-177 1402 chr3L 6405643 6405687 chr3L 6432127 6432171 roo 13 26484 10.5 8.0 9.2 1.3 26528 chr3L 6405643 intron CG42747 + chr3L 6418907 intron CG42747 + chr3L 6432171 intron CG42747 + chr3L_13_6415001 chr3L_6415001 RAL-177 1403 chr3L 6512257 6512291 chr3L 6512353 6512375 9 99 3.5 3.0 3.2 2.1 118 chr3L 6512257 intron sfl + chr3L 6512316 intron sfl + chr3L 6512375 intron sfl + chr3L_9_6510001 chr3L_6510001 RAL-177 1404 chr3L 6582445 6582491 chr3L 6582566 6582606 11 121 5.0 5.5 5.2 1.8 161 chr3L 6582445 intron,intron CG18769 +,jv - chr3L 6582526 intron,intron CG18769 +,jv - chr3L 6582606 intron,intron CG18769 +,jv - chr3L_11_6580001 chr3L_6580001 RAL-177 1405 chr3L 6620592 6620609 chr3L 6621052 6621057 Rt1c 6 458 5.0 12.5 8.8 0.6 465 chr3L 6620592 intergenic not near genes chr3L 6620824 intergenic not near genes chr3L 6621057 intergenic not near genes chr3L_6_6620001 chr3L_6620001 RAL-177 1406 chr3L 6646589 6646621 chr3L 6646704 6646729 11 111 6.5 0.0 3.2 2.6 140 chr3L 6646589 intergenic not near genes chr3L 6646659 intergenic not near genes chr3L 6646729 intergenic not near genes chr3L_11_6645001 chr3L_6645001 RAL-177 1407 chr3L 6652059 6652101 chr3L 6652157 6652199 10 97 4.5 3.5 4.0 2.0 140 chr3L 6652059 intergenic not near genes chr3L 6652129 intergenic not near genes chr3L 6652199 intergenic not near genes chr3L_10_6650001 chr3L_6650001 RAL-177 1408 chr3L 6704542 6704589 chr3L 6704639 6704660 10 84 3.0 2.5 2.8 2.6 118 chr3L 6704542 intergenic CG8519 + chr3L 6704601 intergenic CG8519 + chr3L 6704660 intergenic CG8519 + chr3L_10_6700001 chr3L_6700001 RAL-177 1409 chr3L 6855911 6855950 chr3L 6860715 6860754 Doc 11 4801 2.5 4.0 3.2 2.6 4843 chr3L 6855911 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860754 intergenic not near genes chr3L_11_6855001 chr3L_6855001 RAL-177 1410 chr3L 6868699 6868733 chr3L 6868797 6868831 9 98 1.0 6.0 3.5 2.0 132 chr3L 6868699 intergenic not near genes chr3L 6868765 intergenic not near genes chr3L 6868831 intergenic not near genes chr3L_9_6865001 chr3L_6865001 RAL-177 1411 chr3L 6887501 6887543 chr3L 6895013 6895018 roo 21 7509 6.0 8.5 7.2 2.6 7517 chr3L 6887501 intergenic not near genes chr3L 6891260 intergenic not near genes chr3L 6895018 intergenic not near genes chr3L_21_6890001 chr3L_6890001 RAL-177 1412 chr3L 6974506 6974521 chr3L 6974595 6974642 6 111 1.5 4.5 3.0 1.5 136 chr3L 6974506 intron Galphai - chr3L 6974574 intron Galphai - chr3L 6974642 intron Galphai - chr3L_6_6970001 chr3L_6970001 RAL-177 1413 chr3L 6994876 6994915 chr3L 6995507 6995546 BS 6 631 3.0 3.0 3.0 1.5 670 chr3L 6994876 intergenic bin + chr3L 6995211 intergenic not near genes chr3L 6995546 intergenic not near genes chr3L_6_6995001 chr3L_6995001 RAL-177 1414 chr3L 7013437 7013474 chr3L 7013545 7013597 6 118 4.0 0.0 2.0 2.0 160 chr3L 7013437 intron Mp + chr3L 7013517 intron Mp + chr3L 7013597 intron Mp + chr3L_6_7010001 chr3L_7010001 RAL-177 1415 chr3L 7033154 7033202 chr3L 7033254 7033304 13 100 4.0 7.0 5.5 2.0 150 chr3L 7033154 intron Mp + chr3L 7033229 intron Mp + chr3L 7033304 intron Mp + chr3L_13_7030001 chr3L_7030001 RAL-177 1416 chr3L 7054467 7054488 chr3L 7054564 7054615 7 113 1.0 3.5 2.2 2.2 148 chr3L 7054467 intergenic not near genes chr3L 7054541 intergenic not near genes chr3L 7054615 intergenic not near genes chr3L_7_7050001 chr3L_7050001 RAL-177 1417 chr3L 7058093 7058130 chr3L 7058190 7058203 4 88 3.0 2.5 2.8 1.1 110 chr3L 7058093 intergenic not near genes chr3L 7058148 intergenic not near genes chr3L 7058203 intergenic not near genes chr3L_4_7055001 chr3L_7055001 RAL-177 1418 chr3L 7090006 7090053 chr3L 7090107 7090154 21 101 4.0 5.5 4.8 3.6 148 chr3L 7090006 intergenic not near genes chr3L 7090080 intergenic not near genes chr3L 7090154 intergenic not near genes chr3L_21_7090001 chr3L_7090001 RAL-177 1419 chr3L 7112575 7112609 chr3L 7112682 7112716 12 105 8.5 6.5 7.5 1.4 141 chr3L 7112575 intron form3 + chr3L 7112646 intron form3 + chr3L 7112716 intron form3 + chr3L_12_7110001 chr3L_7110001 RAL-177 1420 chr3L 7129969 7129980 chr3L 7130181 7130192 BS 13 212 1.0 11.0 6.0 1.9 223 chr3L 7129969 intergenic CG15829 + chr3L 7130080 intergenic CG15829 + chr3L 7130192 intergenic not near genes chr3L_13_7130001 chr3L_7130001 RAL-177 1421 chr3L 7150876 7150891 chr3L 7150972 7150987 6 96 7.0 9.0 8.0 0.7 111 chr3L 7150876 intron corn - chr3L 7150932 intron corn - chr3L 7150987 intron corn - chr3L_6_7150001 chr3L_7150001 RAL-177 1422 chr3L 7187385 7187411 chr3L 7187487 7187513 10 102 0.0 0.0 0.0 10.0 128 chr3L 7187385 intron Dscam2 - chr3L 7187449 intron Dscam2 - chr3L 7187513 intron Dscam2 - chr3L_10_7185001 chr3L_7185001 RAL-177 1423 chr3L 7265787 7265832 chr3L 7266050 7266095 13 260 1.0 5.5 3.2 3.1 308 chr3L 7265787 intergenic unc-13-4A - chr3L 7265941 intergenic unc-13-4A - chr3L 7266095 intergenic unc-13-4A - chr3L_13_7265001 chr3L_7265001 RAL-177 1424 chr3L 7285428 7285467 chr3L 7285526 7285565 5 96 3.5 0.5 2.0 1.7 137 chr3L 7285428 intron unc-13-4A - chr3L 7285496 intron unc-13-4A - chr3L 7285565 intron unc-13-4A - chr3L_5_7285001 chr3L_7285001 RAL-177 1425 chr3L 7334316 7334332 chr3L 7334403 7334407 5 83 6.5 2.5 4.5 0.9 91 chr3L 7334316 exon,5` UTR CG43780 -,CG43781 - chr3L 7334362 exon,5` UTR CG43780 -,CG43781 - chr3L 7334407 exon,5` UTR CG43780 -,CG43781 - chr3L_5_7330001 chr3L_7330001 RAL-177 1426 chr3L 7377302 7377345 chr3L 7380427 7380470 297 16 3125 3.5 5.5 4.5 2.9 3168 chr3L 7377302 intron SMSr - chr3L 7378886 intron SMSr - chr3L 7380470 intron SMSr - chr3L_16_7375001 chr3L_7375001 RAL-177 1427 chr3L 7403579 7403614 chr3L 7403680 7403715 12 99 6.0 5.0 5.5 1.8 136 chr3L 7403579 exon CG8560 - chr3L 7403647 intron CG8560 - chr3L 7403715 intron CG8560 - chr3L_12_7400001 chr3L_7400001 RAL-177 1428 chr3L 7439421 7439454 chr3L 7440854 7440887 9 1434 8.0 34.0 21.0 0.4 1466 chr3L 7439421 intron CG42458 + chr3L 7440154 intron,exon CG42458 +,sphinx2 - chr3L 7440887 intron CG42458 + chr3L_9_7440001 chr3L_7440001 RAL-177 1429 chr3L 7444002 7444023 chr3L 7444120 7444141 5 118 11.5 0.0 5.8 0.7 139 chr3L 7444002 intron CG42458 + chr3L 7444072 intron CG42458 + chr3L 7444141 intron CG42458 + chr3L_5_7440001 chr3L_7440001 RAL-177 1430 chr3L 7488846 7488889 chr3L 7488947 7488984 15 101 5.5 4.0 4.8 2.6 138 chr3L 7488846 intergenic not near genes chr3L 7488915 intergenic not near genes chr3L 7488984 intergenic not near genes chr3L_15_7485001 chr3L_7485001 RAL-177 1431 chr3L 7498710 7498756 chr3L 7503536 7503554 F-element 11 4822 1.5 6.0 3.8 2.3 4844 chr3L 7498710 5` UTR CG8539 - chr3L 7501132 intergenic not near genes chr3L 7503554 intergenic not near genes chr3L_11_7500001 chr3L_7500001 RAL-177 1432 chr3L 7505400 7505439 chr3L 7505496 7505535 9 95 4.0 5.5 4.8 1.6 135 chr3L 7505400 intergenic CG7548 - chr3L 7505468 intergenic CG7548 - chr3L 7505535 intergenic CG7548 - chr3L_9_7505001 chr3L_7505001 RAL-177 1433 chr3L 7524143 7524161 chr3L 7524260 7524278 9 117 10.0 9.0 9.5 0.9 135 chr3L 7524143 intron ltl + chr3L 7524210 intron ltl + chr3L 7524278 intron ltl + chr3L_9_7520001 chr3L_7520001 RAL-177 1434 chr3L 7524162 7524172 chr3L 7524249 7524289 5 111 8.5 5.5 7.0 0.6 127 chr3L 7524162 intron ltl + chr3L 7524226 intron ltl + chr3L 7524289 intron ltl + chr3L_5_7520001 chr3L_7520001 RAL-177 1435 chr3L 7576191 7576243 chr3L 7576299 7576351 10 108 5.0 2.5 3.8 2.1 160 chr3L 7576191 intergenic not near genes chr3L 7576271 intergenic not near genes chr3L 7576351 intergenic not near genes chr3L_10_7575001 chr3L_7575001 RAL-177 1436 chr3L 7591130 7591180 chr3L 7591241 7591283 17 99 3.5 2.0 2.8 4.5 153 chr3L 7591130 intergenic CG7716 - chr3L 7591206 intergenic CG7716 - chr3L 7591283 intergenic CG7716 - chr3L_17_7590001 chr3L_7590001 RAL-177 1437 chr3L 7691828 7691853 chr3L 7691940 7691965 4 112 3.0 2.5 2.8 1.1 137 chr3L 7691828 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691896 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691965 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_4_7690001 chr3L_7690001 RAL-177 1438 chr3L 7752128 7752178 chr3L 7752255 7752300 15 124 7.0 1.0 4.0 3.0 172 chr3L 7752128 intron CG32373 + chr3L 7752214 intron CG32373 + chr3L 7752300 intron CG32373 + chr3L_15_7750001 chr3L_7750001 RAL-177 1439 chr3L 7793698 7793738 chr3L 7800770 7800810 297 14 7072 5.5 7.0 6.2 1.9 7112 chr3L 7793698 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800810 intron CG32369 - chr3L_14_7795001 chr3L_7795001 RAL-177 1440 chr3L 7855411 7855467 chr3L 7855520 7855576 10 105 2.5 0.5 1.5 4.0 165 chr3L 7855411 intron Pdp1 - chr3L 7855494 intron Pdp1 - chr3L 7855576 intron Pdp1 - chr3L_10_7855001 chr3L_7855001 RAL-177 1441 chr3L 7886495 7886547 chr3L 7889033 7889085 Stalker4 19 2537 1.5 3.5 2.5 5.4 2590 chr3L 7886495 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889085 intron CG32365 + chr3L_19_7885001 chr3L_7885001 RAL-177 1442 chr3L 7916816 7916859 chr3L 7926007 7926045 roo 15 9190 5.0 5.0 5.0 2.5 9229 chr3L 7916816 3` UTR syd - chr3L 7921430 intron syd - chr3L 7926045 3` UTR syd - chr3L_15_7920001 chr3L_7920001 RAL-177 1443 chr3L 7939450 7939469 chr3L 7939552 7939571 10 101 6.0 8.5 7.2 1.2 121 chr3L 7939450 intergenic not near genes chr3L 7939510 intergenic not near genes chr3L 7939571 intergenic not near genes chr3L_10_7935001 chr3L_7935001 RAL-177 1444 chr3L 7985354 7985393 chr3L 7987702 7987741 NOF 12 2348 6.5 2.5 4.5 2.2 2387 chr3L 7985354 intron nmo + chr3L 7986548 intron nmo + chr3L 7987741 intron nmo + chr3L_12_7985001 chr3L_7985001 RAL-177 1445 chr3L 8003555 8003599 chr3L 8003655 8003658 7 101 3.5 0.5 2.0 2.3 103 chr3L 8003555 intron nmo + chr3L 8003606 intron nmo + chr3L 8003658 intron nmo + chr3L_7_8000001 chr3L_8000001 RAL-177 1446 chr3L 8060017 8060066 chr3L 8060135 8060185 9 116 3.5 6.0 4.8 1.6 168 chr3L 8060017 intergenic not near genes chr3L 8060101 intergenic not near genes chr3L 8060185 intergenic not near genes chr3L_9_8060001 chr3L_8060001 RAL-177 1447 chr3L 8062840 8062859 chr3L 8062939 8062958 8 98 3.0 6.0 4.5 1.5 118 chr3L 8062840 intergenic not near genes chr3L 8062899 intergenic not near genes chr3L 8062958 intergenic not near genes chr3L_8_8060001 chr3L_8060001 RAL-177 1448 chr3L 8203532 8203560 chr3L 8203622 8203652 6 88 3.5 8.5 6.0 0.9 120 chr3L 8203532 intergenic CG13679 + chr3L 8203592 intergenic CG13679 + chr3L 8203652 intergenic CG13679 + chr3L_6_8200001 chr3L_8200001 RAL-177 1449 chr3L 8226694 8226737 chr3L 8226813 8226849 20 118 9.0 0.5 4.8 3.4 155 chr3L 8226694 intergenic not near genes chr3L 8226772 intergenic not near genes chr3L 8226849 intergenic not near genes chr3L_20_8225001 chr3L_8225001 RAL-177 1450 chr3L 8233573 8233586 chr3L 8238855 8238859 Rt1a 4 5280 4.0 9.5 6.8 0.5 5286 chr3L 8233573 intron CG7213 - chr3L 8236216 intron CG7213 - chr3L 8238859 intron,intron CG7213 -,Dscam4 + chr3L_4_8235001 chr3L_8235001 RAL-177 1451 chr3L 8274819 8274834 chr3L 8274953 8274963 5 133 4.0 0.0 2.0 1.7 144 chr3L 8274819 intron Dscam4 + chr3L 8274891 intron Dscam4 + chr3L 8274963 intron Dscam4 + chr3L_5_8270001 chr3L_8270001 RAL-177 1452 chr3L 8451370 8451414 chr3L 8451468 8451512 30 98 4.5 3.5 4.0 6.0 142 chr3L 8451370 intron Gug + chr3L 8451441 intron Gug + chr3L 8451512 intron Gug + chr3L_30_8450001 chr3L_8450001 RAL-177 1453 chr3L 8455622 8455627 chr3L 8455724 8455729 6 102 1.5 11.5 6.5 0.8 107 chr3L 8455622 intron Gug + chr3L 8455676 intron Gug + chr3L 8455729 intron Gug + chr3L_6_8455001 chr3L_8455001 RAL-177 1454 chr3L 8456457 8456478 chr3L 8456572 8456593 8 112 1.5 3.0 2.2 2.5 136 chr3L 8456457 intron Gug + chr3L 8456525 intron Gug + chr3L 8456593 intron Gug + chr3L_8_8455001 chr3L_8455001 RAL-177 1455 chr3L 8456483 8456488 chr3L 8456580 8456607 4 108 1.0 3.0 2.0 1.3 124 chr3L 8456483 intron Gug + chr3L 8456545 intron Gug + chr3L 8456607 intron Gug + chr3L_4_8455001 chr3L_8455001 RAL-177 1456 chr3L 8481794 8481803 chr3L 8490953 8490976 roo 6 9165 4.0 7.0 5.5 0.9 9182 chr3L 8481794 intron CG43163 - chr3L 8486385 intron CG43163 - chr3L 8490976 intron CG43163 - chr3L_6_8485001 chr3L_8485001 RAL-177 1457 chr3L 8498300 8498326 chr3L 8505787 8505813 blood 4 7487 0.0 8.5 4.2 0.8 7513 chr3L 8498300 intron CG43163 - chr3L 8502056 intron CG43163 - chr3L 8505813 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-177 1458 chr3L 8540689 8540732 chr3L 8540786 8540828 11 96 7.0 6.5 6.8 1.4 139 chr3L 8540689 intergenic not near genes chr3L 8540758 intergenic not near genes chr3L 8540828 intergenic not near genes chr3L_11_8540001 chr3L_8540001 RAL-177 1459 chr3L 8627137 8627145 chr3L 8627249 8627256 6 112 0.0 0.5 0.2 5.0 119 chr3L 8627137 intron Zasp66 + chr3L 8627196 intron Zasp66 + chr3L 8627256 intron Zasp66 + chr3L_6_8625001 chr3L_8625001 RAL-177 1460 chr3L 8642701 8642710 chr3L 8642802 8642811 5 101 10.5 6.5 8.5 0.5 110 chr3L 8642701 intron Cpr66D + chr3L 8642756 intron Cpr66D + chr3L 8642811 intron Cpr66D + chr3L_5_8640001 chr3L_8640001 RAL-177 1461 chr3L 8791257 8791305 chr3L 8796697 8796744 I-element 7 5440 7.5 0.0 3.8 1.5 5487 chr3L 8791257 exon Fhos + chr3L 8794000 intron Fhos + chr3L 8796744 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-177 1462 chr3L 8839719 8839736 chr3L 8839819 8839836 4 100 5.5 0.5 3.0 1.0 117 chr3L 8839719 intron dally + chr3L 8839778 intron dally + chr3L 8839836 intron dally + chr3L_4_8835001 chr3L_8835001 RAL-177 1463 chr3L 8841470 8841489 chr3L 8841827 8841841 5 356 4.0 1.0 2.5 1.4 371 chr3L 8841470 intron dally + chr3L 8841656 intron dally + chr3L 8841841 intron dally + chr3L_5_8840001 chr3L_8840001 RAL-177 1464 chr3L 8913641 8913694 chr3L 8913752 8913805 9 111 4.0 0.0 2.0 3.0 164 chr3L 8913641 intron Tsp66E + chr3L 8913723 intron Tsp66E + chr3L 8913805 intron Tsp66E + chr3L_9_8910001 chr3L_8910001 RAL-177 1465 chr3L 8949382 8949509 chr3L 8949499 8949610 12 111 0.0 0.0 0.0 12.0 228 chr3L 8949382 intron,intron CG43783 -,orb2 - chr3L 8949496 intron,intron CG43783 -,orb2 - chr3L 8949610 intron,intron CG43783 -,orb2 - chr3L_12_8945001 chr3L_8945001 RAL-177 1466 chr3L 8959379 8959392 chr3L 8959560 8959573 5 181 6.0 1.0 3.5 1.1 194 chr3L 8959379 intron CG13313 + chr3L 8959476 intron CG13313 + chr3L 8959573 intron CG13313 + chr3L_5_8955001 chr3L_8955001 RAL-177 1467 chr3L 8985278 8985324 chr3L 8985375 8985418 11 96 5.0 7.0 6.0 1.6 140 chr3L 8985278 intron Galk - chr3L 8985348 intron Galk - chr3L 8985418 intron Galk - chr3L_11_8985001 chr3L_8985001 RAL-177 1468 chr3L 9009296 9009333 chr3L 9009385 9009436 8 93 4.0 2.5 3.2 1.9 140 chr3L 9009296 exon CG5194 - chr3L 9009366 exon CG5194 - chr3L 9009436 exon CG5194 - chr3L_8_9005001 chr3L_9005001 RAL-177 1469 chr3L 9066731 9066773 chr3L 9066847 9066889 18 114 3.5 5.5 4.5 3.3 158 chr3L 9066731 intergenic CG4911 - chr3L 9066810 intergenic CG4911 - chr3L 9066889 intergenic CG4911 - chr3L_18_9065001 chr3L_9065001 RAL-177 1470 chr3L 9076912 9076944 chr3L 9084492 9084524 412 6 7580 6.0 4.0 5.0 1.0 7612 chr3L 9076912 exon Tequila + chr3L 9080718 intron Tequila + chr3L 9084524 exon Tequila + chr3L_6_9080001 chr3L_9080001 RAL-177 1471 chr3L 9109730 9109777 chr3L 9110355 9110402 25 623 1.0 6.5 3.8 5.2 672 chr3L 9109730 intron bol - chr3L 9110066 intron bol - chr3L 9110402 intron bol - chr3L_25_9110001 chr3L_9110001 RAL-177 1472 chr3L 9130547 9130573 chr3L 9134317 9134349 412 7 3774 8.0 2.5 5.2 1.1 3802 chr3L 9130547 intergenic bol - chr3L 9132448 intergenic not near genes chr3L 9134349 intergenic Dhpr + chr3L_7_9130001 chr3L_9130001 RAL-177 1473 chr3L 9219238 9219270 chr3L 9219930 9219944 jockey 8 685 4.0 8.0 6.0 1.1 706 chr3L 9219238 intergenic not near genes chr3L 9219591 intergenic not near genes chr3L 9219944 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-177 1474 chr3L 9270614 9270647 chr3L 9278385 9278418 roo 6 7765 6.5 5.5 6.0 0.9 7804 chr3L 9270614 intron GluRIB + chr3L 9274516 intron GluRIB + chr3L 9278418 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-177 1475 chr3L 9307795 9307796 chr3L 18417066 18417066 12 9109271 14.0 15.5 14.8 0.8 9109271 chr3L 9307795 intergenic not near genes chr3L 13862430 intron CG8745 - chr3L 18417066 intergenic not near genes chr3L_12_13860001 chr3L_13860001 RAL-177 1476 chr3L 9312705 9312731 chr3L 9312803 9312829 7 98 4.0 3.0 3.5 1.6 124 chr3L 9312705 intergenic not near genes chr3L 9312767 intergenic not near genes chr3L 9312829 intergenic not near genes chr3L_7_9310001 chr3L_9310001 RAL-177 1477 chr3L 9359577 9359613 chr3L 9359688 9359724 8 110 8.0 6.5 7.2 1.0 147 chr3L 9359577 3` UTR CG32039 + chr3L 9359650 3` UTR CG32039 + chr3L 9359724 3` UTR CG32039 + chr3L_8_9355001 chr3L_9355001 RAL-177 1478 chr3L 9443495 9443539 chr3L 9445306 9445350 S-element 22 1808 9.5 7.5 8.5 2.3 1855 chr3L 9443495 intron CG33926 + chr3L 9444422 intron CG33926 + chr3L 9445350 intron CG33926 + chr3L_22_9440001 chr3L_9440001 RAL-177 1479 chr3L 9490820 9490874 chr3L 9491549 9491603 8 720 2.0 1.5 1.8 2.9 783 chr3L 9490820 intron CG32037 - chr3L 9491212 intron CG32037 - chr3L 9491603 exon CG32037 - chr3L_8_9490001 chr3L_9490001 RAL-177 1480 chr3L 9501679 9501727 chr3L 9502185 9502233 roo 13 506 2.0 2.0 2.0 4.3 554 chr3L 9501679 intron path - chr3L 9501956 intron path - chr3L 9502233 intron path - chr3L_13_9500001 chr3L_9500001 RAL-177 1481 chr3L 9502596 9502644 chr3L 9502696 9502744 11 99 1.5 2.0 1.8 3.9 148 chr3L 9502596 intron path - chr3L 9502670 intron path - chr3L 9502744 intron path - chr3L_11_9500001 chr3L_9500001 RAL-177 1482 chr3L 9513428 9513474 chr3L 9513535 9513581 12 107 0.0 4.5 2.2 3.8 153 chr3L 9513428 intergenic CG33702 - chr3L 9513504 intergenic CG33702 - chr3L 9513581 intergenic CG33702 - chr3L_12_9510001 chr3L_9510001 RAL-177 1483 chr3L 9526496 9526514 chr3L 9528164 9528214 Doc 6 1694 6.5 3.5 5.0 1.0 1718 chr3L 9526496 intergenic not near genes chr3L 9527355 intergenic not near genes chr3L 9528214 intergenic not near genes chr3L_6_9525001 chr3L_9525001 RAL-177 1484 chr3L 9533750 9533781 chr3L 9541312 9541315 412 6 7563 5.5 6.5 6.0 0.9 7565 chr3L 9533750 intergenic not near genes chr3L 9537532 intergenic not near genes chr3L 9541315 intergenic not near genes chr3L_6_9535001 chr3L_9535001 RAL-177 1485 chr3L 9571895 9571926 chr3L 9572263 9572294 jockey 13 368 6.0 4.5 5.2 2.1 399 chr3L 9571895 intron CG42673 + chr3L 9572094 intron CG42673 + chr3L 9572294 intron CG42673 + chr3L_13_9570001 chr3L_9570001 RAL-177 1486 chr3L 9572277 9572331 chr3L 9572376 9572430 12 97 4.0 3.5 3.8 2.5 153 chr3L 9572277 intron CG42673 + chr3L 9572354 intron CG42673 + chr3L 9572430 intron CG42673 + chr3L_12_9570001 chr3L_9570001 RAL-177 1487 chr3L 9575890 9575939 chr3L 9580988 9581037 jockey 11 5098 4.0 6.5 5.2 1.8 5147 chr3L 9575890 intron CG42673 + chr3L 9578464 intron CG42673 + chr3L 9581037 intron CG42673 + chr3L_11_9575001 chr3L_9575001 RAL-177 1488 chr3L 9637836 9637880 chr3L 9637938 9637982 19 102 6.0 6.5 6.2 2.6 146 chr3L 9637836 intron fry - chr3L 9637909 intron fry - chr3L 9637982 intron fry - chr3L_19_9635001 chr3L_9635001 RAL-177 1489 chr3L 9639009 9639061 chr3L 9639114 9639166 16 105 0.0 5.5 2.8 4.2 157 chr3L 9639009 intron,3` UTR fry -,CG8329 + chr3L 9639088 intron fry - chr3L 9639166 intron fry - chr3L_16_9635001 chr3L_9635001 RAL-177 1490 chr3L 9689487 9689537 chr3L 9689587 9689637 24 97 6.0 7.5 6.8 3.1 150 chr3L 9689487 intron CG6767 - chr3L 9689562 intron CG6767 - chr3L 9689637 intron CG6767 - chr3L_24_9685001 chr3L_9685001 RAL-177 1491 chr3L 9697750 9697791 chr3L 9697862 9697903 16 112 3.0 5.5 4.2 3.1 153 chr3L 9697750 intergenic not near genes chr3L 9697826 intergenic not near genes chr3L 9697903 intergenic UbcD4 + chr3L_16_9695001 chr3L_9695001 RAL-177 1492 chr3L 9715576 9715624 chr3L 9715672 9715721 12 96 8.5 4.0 6.2 1.7 145 chr3L 9715576 intron vsg + chr3L 9715648 intron vsg + chr3L 9715721 intron vsg + chr3L_12_9715001 chr3L_9715001 RAL-177 1493 chr3L 9773588 9773641 chr3L 9773695 9773739 8 98 0.0 4.0 2.0 2.7 151 chr3L 9773588 intron CG8177 + chr3L 9773664 intron CG8177 + chr3L 9773739 intron CG8177 + chr3L_8_9770001 chr3L_9770001 RAL-177 1494 chr3L 9775346 9775398 chr3L 9775725 9775778 22 378 1.0 4.5 2.8 5.8 432 chr3L 9775346 intron CG8177 + chr3L 9775562 intron CG8177 + chr3L 9775778 intron CG8177 + chr3L_22_9775001 chr3L_9775001 RAL-177 1495 chr3L 9848497 9848537 chr3L 9848593 9848633 5 95 5.5 0.0 2.8 1.3 136 chr3L 9848497 intron RasGAP1 - chr3L 9848565 intron RasGAP1 - chr3L 9848633 intron RasGAP1 - chr3L_5_9845001 chr3L_9845001 RAL-177 1496 chr3L 9865466 9865518 chr3L 9865634 9865686 23 168 4.0 7.0 5.5 3.5 220 chr3L 9865466 intron CG8108 + chr3L 9865576 intron CG8108 + chr3L 9865686 intron CG8108 + chr3L_23_9865001 chr3L_9865001 RAL-177 1497 chr3L 9907866 9907894 chr3L 9907953 9907991 13 90 2.5 2.5 2.5 3.7 125 chr3L 9907866 intergenic CG34356 + chr3L 9907928 intergenic CG34356 + chr3L 9907991 intergenic CG34356 + chr3L_13_9905001 chr3L_9905001 RAL-177 1498 chr3L 9918861 9918913 chr3L 9918976 9919028 15 113 3.0 3.5 3.2 3.6 167 chr3L 9918861 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919028 intron CG34356 + chr3L_15_9915001 chr3L_9915001 RAL-177 1499 chr3L 9929671 9929696 chr3L 9938444 9938479 roo 6 8792 3.0 2.5 2.8 1.6 8808 chr3L 9929671 intron CG34356 + chr3L 9934075 intron CG34356 + chr3L 9938479 intron CG34356 + chr3L_6_9930001 chr3L_9930001 RAL-177 1500 chr3L 9979190 9979239 chr3L 9979522 9979571 12 327 2.5 3.5 3.0 3.0 381 chr3L 9979190 intron dpr6 + chr3L 9979380 intron dpr6 + chr3L 9979571 intron dpr6 + chr3L_12_9975001 chr3L_9975001 RAL-177 1501 chr3L 9992701 9992734 chr3L 9992805 9992838 16 103 3.0 0.0 1.5 6.4 137 chr3L 9992701 intron dpr6 + chr3L 9992770 intron dpr6 + chr3L 9992838 intron dpr6 + chr3L_16_9990001 chr3L_9990001 RAL-177 1502 chr3L 10003131 10003144 chr3L 10003248 10003261 8 116 10.5 2.5 6.5 1.1 130 chr3L 10003131 intron dpr6 + chr3L 10003196 intron dpr6 + chr3L 10003261 intron dpr6 + chr3L_8_10000001 chr3L_10000001 RAL-177 1503 chr3L 10003145 10003179 chr3L 10003247 10003296 10 116 2.5 2.5 2.5 2.9 151 chr3L 10003145 intron dpr6 + chr3L 10003220 intron dpr6 + chr3L 10003296 intron dpr6 + chr3L_10_10000001 chr3L_10000001 RAL-177 1504 chr3L 10005650 10005697 chr3L 10006027 10006074 13 375 4.5 3.0 3.8 2.7 424 chr3L 10005650 intron dpr6 + chr3L 10005862 intron dpr6 + chr3L 10006074 intron dpr6 + chr3L_13_10005001 chr3L_10005001 RAL-177 1505 chr3L 10007172 10007205 chr3L 10007295 10007328 15 123 1.5 3.5 2.5 4.3 156 chr3L 10007172 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007328 intron dpr6 + chr3L_15_10005001 chr3L_10005001 RAL-177 1506 chr3L 10060095 10060114 chr3L 10067694 10067713 17.6 8 7598 6.0 2.5 4.2 1.5 7618 chr3L 10060095 intron dpr6 + chr3L 10063904 intron dpr6 + chr3L 10067713 intron dpr6 + chr3L_8_10060001 chr3L_10060001 RAL-177 1507 chr3L 10214711 10214829 chr3L 10214818 10214951 12 124 0.0 0.0 0.0 12.0 240 chr3L 10214711 intergenic not near genes chr3L 10214831 intergenic not near genes chr3L 10214951 intergenic not near genes chr3L_12_10210001 chr3L_10210001 RAL-177 1508 chr3L 10219299 10219336 chr3L 10219404 10219418 13 108 5.0 2.5 3.8 2.7 119 chr3L 10219299 exon CG32055 - chr3L 10219358 exon CG32055 - chr3L 10219418 exon CG32055 - chr3L_13_10215001 chr3L_10215001 RAL-177 1509 chr3L 10222749 10222776 chr3L 10222849 10222876 11 100 1.5 5.5 3.5 2.4 127 chr3L 10222749 intron scramb1 - chr3L 10222812 intron scramb1 - chr3L 10222876 intron scramb1 - chr3L_11_10220001 chr3L_10220001 RAL-177 1510 chr3L 10250313 10250356 chr3L 10250424 10250467 16 110 0.0 2.5 1.2 7.3 154 chr3L 10250313 intergenic not near genes chr3L 10250390 intergenic not near genes chr3L 10250467 intergenic not near genes chr3L_16_10250001 chr3L_10250001 RAL-177 1511 chr3L 10281720 10281744 chr3L 10281847 10281881 12 134 8.5 6.5 7.5 1.4 161 chr3L 10281720 intergenic not near genes chr3L 10281800 intergenic not near genes chr3L 10281881 intergenic not near genes chr3L_12_10280001 chr3L_10280001 RAL-177 1512 chr3L 10308736 10308750 chr3L 10308833 10308847 4 97 4.0 3.0 3.5 0.9 111 chr3L 10308736 intergenic not near genes chr3L 10308792 intergenic not near genes chr3L 10308847 intergenic not near genes chr3L_4_10305001 chr3L_10305001 RAL-177 1513 chr3L 10308756 10308773 chr3L 10308832 10308870 8 93 2.5 2.5 2.5 2.3 114 chr3L 10308756 intergenic not near genes chr3L 10308813 intergenic not near genes chr3L 10308870 intergenic not near genes chr3L_8_10305001 chr3L_10305001 RAL-177 1514 chr3L 10324021 10324062 chr3L 10325135 10325162 12 1112 7.0 6.5 6.8 1.5 1141 chr3L 10324021 intergenic not near genes chr3L 10324592 intergenic not near genes chr3L 10325162 intergenic not near genes chr3L_12_10320001 chr3L_10320001 RAL-177 1515 chr3L 10328098 10328128 chr3L 10328230 10328249 11 131 8.0 8.0 8.0 1.2 151 chr3L 10328098 intergenic not near genes chr3L 10328174 intergenic not near genes chr3L 10328249 intergenic not near genes chr3L_11_10325001 chr3L_10325001 RAL-177 1516 chr3L 10348640 10348646 chr3L 10348777 10348783 4 137 6.5 0.0 3.2 1.0 143 chr3L 10348640 intron CR44327 + chr3L 10348712 intron CR44327 + chr3L 10348783 intron CR44327 + chr3L_4_10345001 chr3L_10345001 RAL-177 1517 chr3L 10348649 10348675 chr3L 10348774 10348812 11 136 3.0 0.0 1.5 4.4 163 chr3L 10348649 intron CR44327 + chr3L 10348730 intron CR44327 + chr3L 10348812 intron CR44327 + chr3L_11_10345001 chr3L_10345001 RAL-177 1518 chr3L 10381306 10381355 chr3L 10381405 10381454 13 99 1.5 0.0 0.8 7.2 148 chr3L 10381306 intergenic not near genes chr3L 10381380 intergenic not near genes chr3L 10381454 intergenic not near genes chr3L_13_10380001 chr3L_10380001 RAL-177 1519 chr3L 10414939 10414971 chr3L 10417322 10417363 Doc 10 2391 0.5 5.0 2.8 2.6 2424 chr3L 10414939 intergenic CG12362 + chr3L 10416151 intergenic not near genes chr3L 10417363 intergenic not near genes chr3L_10_10415001 chr3L_10415001 RAL-177 1520 chr3L 10421355 10421380 chr3L 10421531 10421556 5 176 3.5 5.0 4.2 1.0 201 chr3L 10421355 intergenic not near genes chr3L 10421456 intergenic not near genes chr3L 10421556 intergenic not near genes chr3L_5_10420001 chr3L_10420001 RAL-177 1521 chr3L 10430058 10430105 chr3L 10430155 10430202 12 97 5.0 7.0 6.0 1.7 144 chr3L 10430058 3` UTR Ir67b - chr3L 10430130 3` UTR Ir67b - chr3L 10430202 3` UTR Ir67b - chr3L_12_10430001 chr3L_10430001 RAL-177 1522 chr3L 10455986 10456034 chr3L 10456199 10456247 17 213 5.0 3.5 4.2 3.3 261 chr3L 10455986 intergenic not near genes chr3L 10456116 intergenic not near genes chr3L 10456247 intergenic not near genes chr3L_17_10455001 chr3L_10455001 RAL-177 1523 chr3L 10469913 10469964 chr3L 10470009 10470060 18 96 4.5 2.0 3.2 4.3 147 chr3L 10469913 intergenic not near genes chr3L 10469986 intergenic not near genes chr3L 10470060 intergenic not near genes chr3L_18_10465001 chr3L_10465001 RAL-177 1524 chr3L 10551453 10551492 chr3L 10551560 10551599 15 107 0.0 6.5 3.2 3.6 146 chr3L 10551453 intron A2bp1 + chr3L 10551526 intron A2bp1 + chr3L 10551599 intron A2bp1 + chr3L_15_10550001 chr3L_10550001 RAL-177 1525 chr3L 10584267 10584302 chr3L 10584374 10584409 17 107 6.5 7.5 7.0 2.1 142 chr3L 10584267 intron A2bp1 + chr3L 10584338 intron A2bp1 + chr3L 10584409 intron A2bp1 + chr3L_17_10580001 chr3L_10580001 RAL-177 1526 chr3L 10600438 10600476 chr3L 10600540 10600578 9 102 6.0 2.5 4.2 1.7 140 chr3L 10600438 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600578 intergenic not near genes chr3L_9_10600001 chr3L_10600001 RAL-177 1527 chr3L 10601191 10601230 chr3L 10601304 10601338 8 111 2.0 6.5 4.2 1.5 147 chr3L 10601191 intergenic not near genes chr3L 10601264 intergenic not near genes chr3L 10601338 intergenic not near genes chr3L_8_10600001 chr3L_10600001 RAL-177 1528 chr3L 10611605 10611630 chr3L 10611729 10611754 11 124 0.0 0.0 0.0 11.0 149 chr3L 10611605 intergenic not near genes chr3L 10611680 intergenic not near genes chr3L 10611754 intergenic not near genes chr3L_11_10610001 chr3L_10610001 RAL-177 1529 chr3L 10614751 10614794 chr3L 10614858 10614893 10 101 0.0 8.0 4.0 2.0 142 chr3L 10614751 intergenic not near genes chr3L 10614822 intergenic not near genes chr3L 10614893 intergenic not near genes chr3L_10_10610001 chr3L_10610001 RAL-177 1530 chr3L 10653331 10653358 chr3L 10653436 10653463 4 100 1.0 7.0 4.0 0.8 132 chr3L 10653331 intron CG32066 - chr3L 10653397 intron CG32066 - chr3L 10653463 intron CG32066 - chr3L_4_10650001 chr3L_10650001 RAL-177 1531 chr3L 10654965 10654990 chr3L 10655065 10655090 5 100 1.0 3.5 2.2 1.6 125 chr3L 10654965 intron CG32066 - chr3L 10655028 intron CG32066 - chr3L 10655090 intron CG32066 - chr3L_5_10655001 chr3L_10655001 RAL-177 1532 chr3L 10658059 10658107 chr3L 10658156 10658204 15 97 0.0 2.5 1.2 6.8 145 chr3L 10658059 intron CG32066 - chr3L 10658132 intron CG32066 - chr3L 10658204 intron CG32066 - chr3L_15_10655001 chr3L_10655001 RAL-177 1533 chr3L 10658952 10658997 chr3L 10659253 10659277 8 294 8.0 0.0 4.0 1.6 325 chr3L 10658952 intron CG32066 - chr3L 10659114 intron CG32066 - chr3L 10659277 intron CG32066 - chr3L_8_10655001 chr3L_10655001 RAL-177 1534 chr3L 10735799 10735802 chr3L 24766918 24766921 4 14031119 15.5 7.0 11.2 0.3 14031122 chr3L 10735799 intergenic not near genes chr3L 17751360 intergenic Adgf-A - chr3L 24766921 intron scro + chr3L_4_17750001 chr3L_17750001 RAL-177 1535 chr3L 10735811 10735832 chr3L 10735920 10735941 11 109 7.5 7.0 7.2 1.3 130 chr3L 10735811 intergenic not near genes chr3L 10735876 intergenic not near genes chr3L 10735941 intergenic not near genes chr3L_11_10735001 chr3L_10735001 RAL-177 1536 chr3L 22023 22039 chr3L 10814549 10814550 4 10792515 18.5 21.0 19.8 0.2 10792527 chr3L 22023 intergenic mthl8 + chr3L 5418286 intergenic not near genes chr3L 10814550 intergenic CG42831 + chr3L_4_5415001 chr3L_5415001 RAL-177 1537 chr3L 10820482 10820498 chr3L 10820651 10820651 5 166 4.0 0.0 2.0 1.7 169 chr3L 10820482 intergenic not near genes chr3L 10820566 intergenic not near genes chr3L 10820651 intergenic not near genes chr3L_5_10820001 chr3L_10820001 RAL-177 1538 chr3L 10937832 10937874 chr3L 10937929 10937971 11 96 2.0 2.5 2.2 3.4 139 chr3L 10937832 intergenic not near genes chr3L 10937902 intergenic not near genes chr3L 10937971 intergenic not near genes chr3L_11_10935001 chr3L_10935001 RAL-177 1539 chr3L 10942046 10942070 chr3L 10942149 10942162 6 100 6.0 6.5 6.2 0.8 116 chr3L 10942046 intergenic not near genes chr3L 10942104 intergenic not near genes chr3L 10942162 intergenic not near genes chr3L_6_10940001 chr3L_10940001 RAL-177 1540 chr3L 10956435 10956467 chr3L 10956573 10956594 9 136 1.0 1.5 1.2 4.1 159 chr3L 10956435 intergenic not near genes chr3L 10956514 intergenic not near genes chr3L 10956594 intergenic not near genes chr3L_9_10955001 chr3L_10955001 RAL-177 1541 chr3L 10956985 10957035 chr3L 10957081 10957126 12 93 4.0 4.0 4.0 2.4 141 chr3L 10956985 intergenic not near genes chr3L 10957056 intergenic not near genes chr3L 10957126 intergenic not near genes chr3L_12_10955001 chr3L_10955001 RAL-177 1542 chr3L 10958186 10958237 chr3L 10958288 10958339 12 101 2.5 0.5 1.5 4.8 153 chr3L 10958186 intergenic not near genes chr3L 10958262 intergenic not near genes chr3L 10958339 intergenic not near genes chr3L_12_10955001 chr3L_10955001 RAL-177 1543 chr3L 11127190 11127199 chr3L 11127287 11127296 5 97 5.5 0.0 2.8 1.3 106 chr3L 11127190 intron CG42575 + chr3L 11127243 intron CG42575 + chr3L 11127296 intron CG42575 + chr3L_5_11125001 chr3L_11125001 RAL-177 1544 chr3L 11135512 11135525 chr3L 11135762 11135775 4 250 5.0 0.0 2.5 1.1 263 chr3L 11135512 intergenic CG14143 + chr3L 11135644 intergenic CG14143 +,CG32082 + chr3L 11135775 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-177 1545 chr3L 11145536 11145549 chr3L 11145646 11145659 4 110 0.0 6.5 3.2 1.0 123 chr3L 11145536 intron CG32082 + chr3L 11145598 intron CG32082 + chr3L 11145659 intron CG32082 + chr3L_4_11145001 chr3L_11145001 RAL-177 1546 chr3L 11187699 11187729 chr3L 11187800 11187830 8 101 0.0 7.5 3.8 1.7 131 chr3L 11187699 intron GlcAT-P - chr3L 11187764 intron GlcAT-P - chr3L 11187830 intron GlcAT-P - chr3L_8_11185001 chr3L_11185001 RAL-177 1547 chr3L 11187731 11187742 chr3L 11187797 11187843 6 95 0.0 6.5 3.2 1.4 112 chr3L 11187731 intron GlcAT-P - chr3L 11187787 intron GlcAT-P - chr3L 11187843 intron GlcAT-P - chr3L_6_11185001 chr3L_11185001 RAL-177 1548 chr3L 11217489 11217526 chr3L 11217592 11217629 14 103 7.5 4.5 6.0 2.0 140 chr3L 11217489 intron CG42671 + chr3L 11217559 intron CG42671 + chr3L 11217629 intron CG42671 + chr3L_14_11215001 chr3L_11215001 RAL-177 1549 chr3L 11224528 11224573 chr3L 11224670 11224714 16 140 4.5 5.5 5.0 2.7 186 chr3L 11224528 intron CG42671 + chr3L 11224621 intron CG42671 + chr3L 11224714 intron CG42671 + chr3L_16_11220001 chr3L_11220001 RAL-177 1550 chr3L 11241774 11241788 chr3L 11241876 11241890 5 102 1.0 5.0 3.0 1.2 116 chr3L 11241774 intergenic not near genes chr3L 11241832 intergenic not near genes chr3L 11241890 intergenic not near genes chr3L_5_11240001 chr3L_11240001 RAL-177 1551 chr3L 11264447 11264474 chr3L 11271417 11271446 17.6 7 6972 11.5 6.0 8.8 0.7 6999 chr3L 11264447 intergenic not near genes chr3L 11267946 intergenic not near genes chr3L 11271446 intergenic not near genes chr3L_7_11265001 chr3L_11265001 RAL-177 1552 chr3L 11276690 11276699 chr3L 11277050 11277064 4 364 0.0 1.0 0.5 2.7 374 chr3L 11276690 intergenic not near genes chr3L 11276877 intergenic not near genes chr3L 11277064 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-177 1553 chr3L 11290604 11290657 chr3L 11290947 11291000 15 342 5.0 4.0 4.5 2.7 396 chr3L 11290604 intron CG6175 - chr3L 11290802 intron CG6175 - chr3L 11291000 intron CG6175 - chr3L_15_11290001 chr3L_11290001 RAL-177 1554 chr3L 11329674 11329713 chr3L 11332899 11332930 jockey 7 3220 5.5 1.5 3.5 1.6 3256 chr3L 11329674 intergenic not near genes chr3L 11331302 intergenic not near genes chr3L 11332930 intergenic not near genes chr3L_7_11330001 chr3L_11330001 RAL-177 1555 chr3L 11340177 11340179 chr3L 14205022 14205024 4 2864845 27.0 11.5 19.2 0.2 2864847 chr3L 11340177 intergenic not near genes chr3L 12772600 intron Hip1 - chr3L 14205024 intron nuf + chr3L_4_12770001 chr3L_12770001 RAL-177 1556 chr3L 11475607 11475643 chr3L 11475718 11475754 12 110 6.0 4.5 5.2 1.9 147 chr3L 11475607 intergenic Vha16-2 + chr3L 11475680 intergenic Vha16-2 + chr3L 11475754 intergenic Vha16-2 + chr3L_12_11475001 chr3L_11475001 RAL-177 1557 chr3L 11493139 11493186 chr3L 11493254 11493301 19 114 0.0 5.0 2.5 5.4 162 chr3L 11493139 intron chrb + chr3L 11493220 intron chrb + chr3L 11493301 intron chrb + chr3L_19_11490001 chr3L_11490001 RAL-177 1558 chr3L 11564791 11564808 chr3L 11572414 11572429 412 5 7625 8.0 7.0 7.5 0.6 7638 chr3L 11564791 exon CG33267 + chr3L 11568610 intron CG33267 + chr3L 11572429 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-177 1559 chr3L 11579557 11579583 chr3L 11579683 11579694 6 123 2.5 4.0 3.2 1.4 137 chr3L 11579557 intergenic CG43390 - chr3L 11579626 intergenic CG43390 - chr3L 11579694 intergenic CG43390 - chr3L_6_11575001 chr3L_11575001 RAL-177 1560 chr3L 11648500 11648513 chr3L 11648596 11648610 7 100 9.0 0.0 4.5 1.3 110 chr3L 11648500 intergenic RIOK1 -,CG7339 + chr3L 11648555 intergenic RIOK1 -,CG7339 + chr3L 11648610 intergenic RIOK1 -,CG7339 + chr3L_7_11645001 chr3L_11645001 RAL-177 1561 chr3L 11663731 11663757 chr3L 11663876 11663902 6 144 5.5 0.0 2.8 1.6 171 chr3L 11663731 intron CG32085 - chr3L 11663816 intron CG32085 - chr3L 11663902 intron CG32085 - chr3L_6_11660001 chr3L_11660001 RAL-177 1562 chr3L 11678075 11678123 chr3L 11678182 11678230 13 107 7.5 6.0 6.8 1.7 155 chr3L 11678075 intron CG32085 - chr3L 11678152 intron CG32085 - chr3L 11678230 intron CG32085 - chr3L_13_11675001 chr3L_11675001 RAL-177 1563 chr3L 11723069 11723107 chr3L 11727884 11727922 Doc 15 4815 6.0 7.0 6.5 2.0 4853 chr3L 11723069 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727922 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 RAL-177 1564 chr3L 11729667 11729704 chr3L 11729763 11729800 16 95 4.0 8.5 6.2 2.2 133 chr3L 11729667 exon CG32088 + chr3L 11729734 intron CG32088 + chr3L 11729800 exon CG32088 + chr3L_16_11725001 chr3L_11725001 RAL-177 1565 chr3L 11743995 11744035 chr3L 11744123 11744137 19 125 6.0 0.5 3.2 4.5 142 chr3L 11743995 exon CG6024 - chr3L 11744066 intron CG6024 - chr3L 11744137 intron CG6024 - chr3L_19_11740001 chr3L_11740001 RAL-177 1566 chr3L 11846414 11846419 chr3L 11846510 11846547 4 120 1.0 1.5 1.2 1.8 133 chr3L 11846414 intergenic not near genes chr3L 11846480 intergenic not near genes chr3L 11846547 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-177 1567 chr3L 11847150 11847166 chr3L 11847260 11847276 9 110 3.0 0.0 1.5 3.6 126 chr3L 11847150 intergenic CG12521 - chr3L 11847213 intergenic CG12521 - chr3L 11847276 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-177 1568 chr3L 11864538 11864566 chr3L 11865853 11865854 pogo 7 1311 2.0 4.0 3.0 1.8 1316 chr3L 11864538 intron CG44837 - chr3L 11865196 intron CG44837 - chr3L 11865854 intron CG44837 - chr3L_7_11865001 chr3L_11865001 RAL-177 1569 chr3L 11864571 11864580 chr3L 11865851 11865895 pogo 9 1302 1.0 4.0 2.5 2.6 1324 chr3L 11864571 intron CG44837 - chr3L 11865233 intron CG44837 - chr3L 11865895 intron CG44837 - chr3L_9_11865001 chr3L_11865001 RAL-177 1570 chr3L 11910325 11910333 chr3L 11910430 11910438 4 105 0.5 0.5 0.5 2.7 113 chr3L 11910325 intron CG44837 - chr3L 11910382 intron CG44837 - chr3L 11910438 intron CG44837 - chr3L_4_11910001 chr3L_11910001 RAL-177 1571 chr3L 11938879 11938900 chr3L 11938958 11939002 7 90 4.0 4.0 4.0 1.4 123 chr3L 11938879 intergenic CG44837 - chr3L 11938940 intergenic CG44837 - chr3L 11939002 intergenic CG44837 - chr3L_7_11935001 chr3L_11935001 RAL-177 1572 chr3L 11943474 11943520 chr3L 11943595 11943641 18 120 3.0 3.5 3.2 4.3 167 chr3L 11943474 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943641 3` UTR CG5883 - chr3L_18_11940001 chr3L_11940001 RAL-177 1573 chr3L 12013891 12013935 chr3L 12014002 12014046 11 111 1.0 0.5 0.8 6.1 155 chr3L 12013891 intron rols - chr3L 12013968 intron rols - chr3L 12014046 intron rols - chr3L_11_12010001 chr3L_12010001 RAL-177 1574 chr3L 12052685 12052738 chr3L 12052794 12052847 18 107 6.0 3.5 4.8 3.1 162 chr3L 12052685 intron rols - chr3L 12052766 intron rols - chr3L 12052847 intron rols - chr3L_18_12050001 chr3L_12050001 RAL-177 1575 chr3L 12089063 12089112 chr3L 12089163 12089212 28 99 4.5 5.5 5.0 4.7 149 chr3L 12089063 exon CG17154 + chr3L 12089138 3` UTR CG17154 + chr3L 12089212 3` UTR CG17154 + chr3L_28_12085001 chr3L_12085001 RAL-177 1576 chr3L 12090644 12090692 chr3L 12090754 12090797 17 109 2.0 2.0 2.0 5.7 153 chr3L 12090644 intergenic not near genes chr3L 12090720 intergenic not near genes chr3L 12090797 intergenic not near genes chr3L_17_12090001 chr3L_12090001 RAL-177 1577 chr3L 12103891 12103921 chr3L 12103987 12104017 14 96 1.5 2.5 2.0 4.7 126 chr3L 12103891 intergenic not near genes chr3L 12103954 intergenic not near genes chr3L 12104017 intergenic not near genes chr3L_14_12100001 chr3L_12100001 RAL-177 1578 chr3L 12105970 12106003 chr3L 12106076 12106111 4 102 3.0 7.0 5.0 0.7 141 chr3L 12105970 intergenic not near genes chr3L 12106040 intergenic not near genes chr3L 12106111 intergenic not near genes chr3L_4_12105001 chr3L_12105001 RAL-177 1579 chr3L 12115725 12115768 chr3L 12115851 12115896 7 127 5.0 0.0 2.5 2.0 171 chr3L 12115725 intergenic l(3)j2D3 + chr3L 12115810 intergenic l(3)j2D3 + chr3L 12115896 intergenic l(3)j2D3 + chr3L_7_12115001 chr3L_12115001 RAL-177 1580 chr3L 12157155 12157192 chr3L 12158363 12158400 23 1208 54.0 44.5 49.2 0.5 1245 chr3L 12157155 3` UTR CG9760 - chr3L 12157778 3` UTR CG9760 - chr3L 12158400 intron CG9760 - chr3L_23_12155001 chr3L_12155001 RAL-177 1581 chr3L 12158490 12158521 chr3L 12158726 12158762 14 240 40.5 16.0 28.2 0.5 272 chr3L 12158490 intron CG9760 - chr3L 12158626 intron CG9760 - chr3L 12158762 intron CG9760 - chr3L_14_12155001 chr3L_12155001 RAL-177 1582 chr3L 12158776 12158789 chr3L 12160247 12160266 5 1466 54.0 56.0 55.0 0.1 1490 chr3L 12158776 intron CG9760 - chr3L 12159521 exon CG9760 - chr3L 12160266 intron CG9760 - chr3L_5_12155001 chr3L_12155001 RAL-177 1583 chr3L 12158775 12158804 chr3L 12160268 12160280 8 1470 59.5 50.5 55.0 0.1 1505 chr3L 12158775 intron CG9760 - chr3L 12159528 exon CG9760 - chr3L 12160280 intron CG9760 - chr3L_8_12155001 chr3L_12155001 RAL-177 1584 chr3L 12156438 12156449 chr3L 12160303 12160348 14 3872 39.0 42.0 40.5 0.3 3910 chr3L 12156438 3` UTR Nrx-IV + chr3L 12158393 intron CG9760 - chr3L 12160348 intron CG9760 - chr3L_14_12155001 chr3L_12155001 RAL-177 1585 chr3L 12170778 12170821 chr3L 12170880 12170923 15 100 4.5 9.5 7.0 1.9 145 chr3L 12170778 intron Rh7 - chr3L 12170850 intron Rh7 - chr3L 12170923 intron Rh7 - chr3L_15_12170001 chr3L_12170001 RAL-177 1586 chr3L 12223851 12223906 chr3L 12223948 12224003 15 92 1.5 4.0 2.8 3.9 152 chr3L 12223851 intron app - chr3L 12223927 intron app - chr3L 12224003 intron app - chr3L_15_12220001 chr3L_12220001 RAL-177 1587 chr3L 12231373 12231413 chr3L 12231652 12231697 10 282 23.0 22.5 22.8 0.4 324 chr3L 12231373 intron app - chr3L 12231535 intron app - chr3L 12231697 intron app - chr3L_10_12230001 chr3L_12230001 RAL-177 1588 chr3L 12273081 12273134 chr3L 12273407 12273460 11 316 3.0 4.5 3.8 2.3 379 chr3L 12273081 intron CG4300 - chr3L 12273270 intron CG4300 - chr3L 12273460 intron CG4300 - chr3L_11_12270001 chr3L_12270001 RAL-177 1589 chr3L 12300828 12300875 chr3L 12300987 12301034 16 158 7.0 6.0 6.5 2.1 206 chr3L 12300828 intergenic CR44550 + chr3L 12300931 intergenic CR44550 + chr3L 12301034 5` UTR CR44550 + chr3L_16_12300001 chr3L_12300001 RAL-177 1590 chr3L 12304093 12304114 chr3L 12304173 12304184 7 89 4.5 7.0 5.8 1.0 91 chr3L 12304093 intergenic not near genes chr3L 12304138 intergenic not near genes chr3L 12304184 intergenic not near genes chr3L_7_12300001 chr3L_12300001 RAL-177 1591 chr3L 12317399 12317452 chr3L 12317520 12317557 13 112 6.5 1.0 3.8 2.7 158 chr3L 12317399 intergenic not near genes chr3L 12317478 intergenic not near genes chr3L 12317557 intergenic not near genes chr3L_13_12315001 chr3L_12315001 RAL-177 1592 chr3L 12361550 12361581 chr3L 12362133 12362163 9 582 6.5 2.5 4.5 1.6 613 chr3L 12361550 intergenic not near genes chr3L 12361856 intergenic not near genes chr3L 12362163 intergenic not near genes chr3L_9_12360001 chr3L_12360001 RAL-177 1593 chr3L 12369508 12369560 chr3L 12369702 12369755 4 194 2.0 0.0 1.0 2.0 247 chr3L 12369508 intron Ncc69 - chr3L 12369632 intron Ncc69 - chr3L 12369755 intron Ncc69 - chr3L_4_12365001 chr3L_12365001 RAL-177 1594 chr3L 12460310 12460343 chr3L 12460407 12460440 14 97 0.0 5.5 2.8 3.7 130 chr3L 12460310 intergenic not near genes chr3L 12460375 intergenic not near genes chr3L 12460440 intergenic not near genes chr3L_14_12460001 chr3L_12460001 RAL-177 1595 chr3L 12476275 12476319 chr3L 12476364 12476415 14 96 4.0 4.5 4.2 2.7 140 chr3L 12476275 intron CG10663 - chr3L 12476345 intron CG10663 - chr3L 12476415 intron CG10663 - chr3L_14_12475001 chr3L_12475001 RAL-177 1596 chr3L 12479495 12479521 chr3L 12479594 12479611 6 97 5.0 4.0 4.5 1.1 116 chr3L 12479495 intron CG10663 - chr3L 12479553 intron CG10663 - chr3L 12479611 intron CG10663 - chr3L_6_12475001 chr3L_12475001 RAL-177 1597 chr3L 12565399 12565444 chr3L 12565499 12565544 9 100 2.5 5.5 4.0 1.8 145 chr3L 12565399 intron sowah - chr3L 12565472 intron sowah - chr3L 12565544 intron sowah - chr3L_9_12565001 chr3L_12565001 RAL-177 1598 chr3L 12569308 12569333 chr3L 12569421 12569438 10 111 9.0 0.0 4.5 1.8 130 chr3L 12569308 intron sowah - chr3L 12569373 intron sowah - chr3L 12569438 intron sowah - chr3L_10_12565001 chr3L_12565001 RAL-177 1599 chr3L 12578051 12578078 chr3L 12578149 12578186 8 105 1.0 0.0 0.5 5.3 135 chr3L 12578051 intergenic not near genes chr3L 12578118 intergenic not near genes chr3L 12578186 intergenic not near genes chr3L_8_12575001 chr3L_12575001 RAL-177 1600 chr3L 12591614 12591634 chr3L 12591711 12591730 4 97 6.0 3.0 4.5 0.7 116 chr3L 12591614 intron ara + chr3L 12591672 intron ara + chr3L 12591730 intron ara + chr3L_4_12590001 chr3L_12590001 RAL-177 1601 chr3L 12614579 12614594 chr3L 12614737 12614752 11 158 0.0 7.0 3.5 2.4 173 chr3L 12614579 intron caup + chr3L 12614666 intron caup + chr3L 12614752 intron caup + chr3L_11_12610001 chr3L_12610001 RAL-177 1602 chr3L 12615741 12615772 chr3L 12615827 12615867 12 91 4.5 6.5 5.5 1.8 126 chr3L 12615741 intron caup + chr3L 12615804 intron caup + chr3L 12615867 intron caup + chr3L_12_12615001 chr3L_12615001 RAL-177 1603 chr3L 12626133 12626165 chr3L 12626262 12626294 13 129 7.5 0.5 4.0 2.6 161 chr3L 12626133 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626294 intergenic not near genes chr3L_13_12625001 chr3L_12625001 RAL-177 1604 chr3L 12668047 12668102 chr3L 12668152 12668182 28 103 4.0 4.0 4.0 5.6 135 chr3L 12668047 intergenic not near genes chr3L 12668114 intergenic not near genes chr3L 12668182 intergenic not near genes chr3L_28_12665001 chr3L_12665001 RAL-177 1605 chr3L 12788399 12788442 chr3L 12788539 12788582 8 134 3.5 3.0 3.2 1.9 183 chr3L 12788399 intron Atg1 - chr3L 12788490 intron Atg1 - chr3L 12788582 exon Atg1 - chr3L_8_12785001 chr3L_12785001 RAL-177 1606 chr3L 12801961 12802013 chr3L 12802057 12802109 12 96 2.5 2.0 2.2 3.8 148 chr3L 12801961 intron Atg1 - chr3L 12802035 intron Atg1 - chr3L 12802109 intron Atg1 - chr3L_12_12800001 chr3L_12800001 RAL-177 1607 chr3L 12857973 12858005 chr3L 12858088 12858120 9 115 2.0 4.5 3.2 2.1 147 chr3L 12857973 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858120 3` UTR CG32107 - chr3L_9_12855001 chr3L_12855001 RAL-177 1608 chr3L 12874920 12874960 chr3L 12877232 12877272 jockey 11 2311 2.0 3.5 2.8 2.9 2352 chr3L 12874920 intergenic not near genes chr3L 12876096 intergenic not near genes chr3L 12877272 intergenic not near genes chr3L_11_12875001 chr3L_12875001 RAL-177 1609 chr3L 12894785 12894810 chr3L 12894883 12894908 5 97 11.0 8.5 9.8 0.5 123 chr3L 12894785 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894908 intergenic CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-177 1610 chr3L 12919061 12919096 chr3L 12919191 12919233 9 136 4.5 2.5 3.5 2.0 172 chr3L 12919061 intergenic not near genes chr3L 12919147 intergenic not near genes chr3L 12919233 intergenic not near genes chr3L_9_12915001 chr3L_12915001 RAL-177 1611 chr3L 12957776 12957816 chr3L 12962278 12962318 copia 18 4502 7.0 7.5 7.2 2.2 4542 chr3L 12957776 intergenic not near genes chr3L 12960047 intergenic not near genes chr3L 12962318 intergenic not near genes chr3L_18_12960001 chr3L_12960001 RAL-177 1612 chr3L 12979902 12979921 chr3L 12979980 12979998 6 87 3.0 1.5 2.2 1.9 96 chr3L 12979902 intergenic not near genes chr3L 12979950 intergenic not near genes chr3L 12979998 intergenic not near genes chr3L_6_12975001 chr3L_12975001 RAL-177 1613 chr3L 13008779 13008827 chr3L 13008952 13009006 7 177 2.5 4.5 3.5 1.6 227 chr3L 13008779 exon CG14117 + chr3L 13008892 intron CG14117 + chr3L 13009006 exon CG14117 + chr3L_7_13005001 chr3L_13005001 RAL-177 1614 chr3L 13017902 13017913 chr3L 13018004 13018015 6 102 5.0 12.5 8.8 0.6 113 chr3L 13017902 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017958 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018015 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_6_13015001 chr3L_13015001 RAL-177 1615 chr3L 13050546 13050584 chr3L 13050645 13050683 13 97 6.0 3.5 4.8 2.2 137 chr3L 13050546 intergenic not near genes chr3L 13050614 intergenic not near genes chr3L 13050683 intergenic not near genes chr3L_13_13050001 chr3L_13050001 RAL-177 1616 chr3L 13067519 13067571 chr3L 13067615 13067667 20 96 1.5 0.5 1.0 10.0 148 chr3L 13067519 intergenic not near genes chr3L 13067593 intergenic not near genes chr3L 13067667 intergenic not near genes chr3L_20_13065001 chr3L_13065001 RAL-177 1617 chr3L 13095806 13095818 chr3L 13095909 13095926 4 107 4.5 0.0 2.2 1.2 120 chr3L 13095806 intergenic not near genes chr3L 13095866 intergenic not near genes chr3L 13095926 intergenic not near genes chr3L_4_13095001 chr3L_13095001 RAL-177 1618 chr3L 13137627 13137681 chr3L 13137735 13137766 15 98 4.0 2.0 3.0 3.8 139 chr3L 13137627 intergenic not near genes chr3L 13137696 intergenic not near genes chr3L 13137766 intergenic not near genes chr3L_15_13135001 chr3L_13135001 RAL-177 1619 chr3L 13159270 13159292 chr3L 13159369 13159376 9 97 4.0 0.5 2.2 2.8 106 chr3L 13159270 intergenic not near genes chr3L 13159323 intergenic not near genes chr3L 13159376 intergenic not near genes chr3L_9_13155001 chr3L_13155001 RAL-177 1620 chr3L 13182430 13182470 chr3L 13182528 13182568 5 98 5.0 1.5 3.2 1.2 138 chr3L 13182430 intergenic not near genes chr3L 13182499 intergenic not near genes chr3L 13182568 intergenic not near genes chr3L_5_13180001 chr3L_13180001 RAL-177 1621 chr3L 13200600 13200615 chr3L 13200702 13200717 INE-1 10 102 2.5 9.5 6.0 1.4 117 chr3L 13200600 intergenic not near genes chr3L 13200658 intergenic not near genes chr3L 13200717 intergenic not near genes chr3L_10_13200001 chr3L_13200001 RAL-177 1622 chr3L 13205221 13205265 chr3L 13205327 13205370 18 105 1.5 1.5 1.5 7.2 149 chr3L 13205221 intergenic not near genes chr3L 13205296 intergenic not near genes chr3L 13205370 intergenic not near genes chr3L_18_13205001 chr3L_13205001 RAL-177 1623 chr3L 13208345 13208366 chr3L 13208444 13208465 4 99 6.5 0.0 3.2 1.0 120 chr3L 13208345 intergenic CR45096 - chr3L 13208405 intergenic CR45096 - chr3L 13208465 intergenic CR45096 - chr3L_4_13205001 chr3L_13205001 RAL-177 1624 chr3L 13240524 13240549 chr3L 13240597 13240643 9 94 2.5 2.5 2.5 2.6 119 chr3L 13240524 intron caps + chr3L 13240584 intron caps + chr3L 13240643 intron caps + chr3L_9_13240001 chr3L_13240001 RAL-177 1625 chr3L 13262532 13262542 chr3L 13262628 13262638 4 96 0.0 7.5 3.8 0.8 106 chr3L 13262532 intron caps + chr3L 13262585 intron caps + chr3L 13262638 intron caps + chr3L_4_13260001 chr3L_13260001 RAL-177 1626 chr3L 13263236 13263245 chr3L 13263321 13263332 5 91 2.0 4.5 3.2 1.2 96 chr3L 13263236 intron caps + chr3L 13263284 intron caps + chr3L 13263332 intron caps + chr3L_5_13260001 chr3L_13260001 RAL-177 1627 chr3L 13263249 13263252 chr3L 13263320 13263338 4 84 2.0 4.5 3.2 1.0 89 chr3L 13263249 intron caps + chr3L 13263294 intron caps + chr3L 13263338 intron caps + chr3L_4_13260001 chr3L_13260001 RAL-177 1628 chr3L 13267267 13267313 chr3L 13267399 13267441 15 129 5.0 3.0 4.0 3.0 174 chr3L 13267267 intron caps + chr3L 13267354 intron caps + chr3L 13267441 intron caps + chr3L_15_13265001 chr3L_13265001 RAL-177 1629 chr3L 13296506 13296541 chr3L 13296617 13296652 11 110 5.5 7.0 6.2 1.5 146 chr3L 13296506 intergenic Sfp70A4 -,CR45253 + chr3L 13296579 3` UTR Sfp70A4 - chr3L 13296652 3` UTR Sfp70A4 - chr3L_11_13295001 chr3L_13295001 RAL-177 1630 chr3L 13313811 13313856 chr3L 13314626 13314653 8 810 6.0 6.0 6.0 1.1 842 chr3L 13313811 intergenic not near genes chr3L 13314232 intergenic not near genes chr3L 13314653 intergenic not near genes chr3L_8_13310001 chr3L_13310001 RAL-177 1631 chr3L 13337149 13337156 chr3L 13337260 13337267 6 111 3.0 4.5 3.8 1.2 118 chr3L 13337149 intergenic not near genes chr3L 13337208 intergenic not near genes chr3L 13337267 intergenic not near genes chr3L_6_13335001 chr3L_13335001 RAL-177 1632 chr3L 13379830 13379875 chr3L 13379959 13380002 9 128 0.0 1.0 0.5 6.0 172 chr3L 13379830 intron CG14111 + chr3L 13379916 intron CG14111 + chr3L 13380002 exon CG14111 + chr3L_9_13375001 chr3L_13375001 RAL-177 1633 chr3L 13400515 13400544 chr3L 13400611 13400640 12 96 3.5 8.5 6.0 1.7 125 chr3L 13400515 intron sens - chr3L 13400578 intron sens - chr3L 13400640 intron sens - chr3L_12_13400001 chr3L_13400001 RAL-177 1634 chr3L 13406258 13406282 chr3L 13406361 13406364 5 93 8.5 8.0 8.2 0.5 106 chr3L 13406258 intergenic not near genes chr3L 13406311 intergenic not near genes chr3L 13406364 intergenic not near genes chr3L_5_13405001 chr3L_13405001 RAL-177 1635 chr3L 13486424 13486470 chr3L 13486690 13486736 14 266 0.0 4.5 2.2 4.4 312 chr3L 13486424 intergenic Abp1 -,Tgi + chr3L 13486580 intergenic Tgi +,Abp1 - chr3L 13486736 intergenic Tgi +,Abp1 - chr3L_14_13485001 chr3L_13485001 RAL-177 1636 chr3L 13535892 13535914 chr3L 13535988 13536005 5 95 5.0 3.5 4.2 1.0 113 chr3L 13535892 intergenic not near genes chr3L 13535948 intergenic not near genes chr3L 13536005 intergenic not near genes chr3L_5_13535001 chr3L_13535001 RAL-177 1637 chr3L 13535920 13535927 chr3L 13535982 13536015 4 81 3.5 3.0 3.2 1.0 95 chr3L 13535920 intergenic not near genes chr3L 13535968 intergenic not near genes chr3L 13536015 intergenic not near genes chr3L_4_13535001 chr3L_13535001 RAL-177 1638 chr3L 13584064 13584110 chr3L 13584170 13584217 10 104 0.0 1.5 0.8 5.6 153 chr3L 13584064 intron bru-3 - chr3L 13584140 intron bru-3 - chr3L 13584217 exon bru-3 - chr3L_10_13580001 chr3L_13580001 RAL-177 1639 chr3L 13595010 13595041 chr3L 13595108 13595141 11 93 0.5 4.5 2.5 3.1 131 chr3L 13595010 intron bru-3 - chr3L 13595076 intron bru-3 - chr3L 13595141 intron bru-3 - chr3L_11_13595001 chr3L_13595001 RAL-177 1640 chr3L 13692583 13692619 chr3L 13692680 13692716 12 96 4.0 4.5 4.2 2.3 133 chr3L 13692583 intron bru-3 - chr3L 13692650 intron bru-3 - chr3L 13692716 intron bru-3 - chr3L_12_13690001 chr3L_13690001 RAL-177 1641 chr3L 13756946 13756994 chr3L 13757045 13757093 5 97 4.0 2.5 3.2 1.2 147 chr3L 13756946 intron bru-3 - chr3L 13757020 intron bru-3 - chr3L 13757093 intron bru-3 - chr3L_5_13755001 chr3L_13755001 RAL-177 1642 chr3L 13766889 13766908 chr3L 13767007 13767023 6 118 5.5 4.0 4.8 1.0 134 chr3L 13766889 intron bru-3 - chr3L 13766956 intron bru-3 - chr3L 13767023 intron bru-3 - chr3L_6_13765001 chr3L_13765001 RAL-177 1643 chr3L 13774616 13774669 chr3L 13774722 13774775 6 106 2.5 1.0 1.8 2.1 159 chr3L 13774616 intron bru-3 - chr3L 13774696 intron bru-3 - chr3L 13774775 intron bru-3 - chr3L_6_13770001 chr3L_13770001 RAL-177 1644 chr3L 13804526 13804571 chr3L 13822831 13822877 roo 8 18304 4.5 2.5 3.5 1.8 18351 chr3L 13804526 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822877 intergenic not near genes chr3L_8_13810001 chr3L_13810001 RAL-177 1645 chr3L 13828672 13828720 chr3L 13828768 13828816 16 95 3.0 2.5 2.8 4.2 144 chr3L 13828672 intergenic not near genes chr3L 13828744 intergenic not near genes chr3L 13828816 intergenic not near genes chr3L_16_13825001 chr3L_13825001 RAL-177 1646 chr3L 13884362 13884387 chr3L 13884473 13884498 12 111 12.0 6.0 9.0 1.2 136 chr3L 13884362 intron dysc - chr3L 13884430 intron dysc - chr3L 13884498 intron dysc - chr3L_12_13880001 chr3L_13880001 RAL-177 1647 chr3L 13920401 13920428 chr3L 13920501 13920528 14 100 0.0 3.0 1.5 5.6 127 chr3L 13920401 intron Rgl - chr3L 13920464 intron Rgl - chr3L 13920528 intron Rgl - chr3L_14_13920001 chr3L_13920001 RAL-177 1648 chr3L 13957868 13957902 chr3L 13958081 13958104 9 210 2.5 3.5 3.0 2.2 236 chr3L 13957868 intron CG32137 + chr3L 13957986 intron CG32137 + chr3L 13958104 intron CG32137 + chr3L_9_13955001 chr3L_13955001 RAL-177 1649 chr3L 14087588 14087604 chr3L 14087693 14087709 4 105 4.5 4.5 4.5 0.7 121 chr3L 14087588 intergenic not near genes chr3L 14087648 intergenic not near genes chr3L 14087709 intergenic not near genes chr3L_4_14085001 chr3L_14085001 RAL-177 1650 chr3L 14110574 14110618 chr3L 14110676 14110720 22 102 3.5 5.5 4.5 4.0 146 chr3L 14110574 intergenic not near genes chr3L 14110647 intergenic not near genes chr3L 14110720 intergenic not near genes chr3L_22_14110001 chr3L_14110001 RAL-177 1651 chr3L 14137186 14137202 chr3L 14137269 14137275 5 80 2.0 5.0 3.5 1.1 89 chr3L 14137186 intergenic not near genes chr3L 14137230 intergenic not near genes chr3L 14137275 intergenic not near genes chr3L_5_14135001 chr3L_14135001 RAL-177 1652 chr3L 14141393 14141407 chr3L 14141500 14141514 5 107 2.0 0.0 1.0 2.5 121 chr3L 14141393 intergenic not near genes chr3L 14141454 intergenic not near genes chr3L 14141514 intergenic not near genes chr3L_5_14140001 chr3L_14140001 RAL-177 1653 chr3L 14165171 14165207 chr3L 14165269 14165305 10 98 10.0 5.5 7.8 1.1 134 chr3L 14165171 intergenic not near genes chr3L 14165238 intergenic not near genes chr3L 14165305 intergenic not near genes chr3L_10_14165001 chr3L_14165001 RAL-177 1654 chr3L 14168253 14168271 chr3L 14168316 14168357 7 80 1.0 6.5 3.8 1.5 104 chr3L 14168253 intergenic not near genes chr3L 14168305 intergenic not near genes chr3L 14168357 intergenic not near genes chr3L_7_14165001 chr3L_14165001 RAL-177 1655 chr3L 14194711 14194726 chr3L 14194807 14194822 10 96 8.5 5.0 6.8 1.3 111 chr3L 14194711 intron nuf + chr3L 14194766 intron nuf + chr3L 14194822 intron nuf + chr3L_10_14190001 chr3L_14190001 RAL-177 1656 chr3L 14194729 14194741 chr3L 14194804 14194837 7 91 7.0 5.0 6.0 1.0 108 chr3L 14194729 intron nuf + chr3L 14194783 intron nuf + chr3L 14194837 intron nuf + chr3L_7_14190001 chr3L_14190001 RAL-177 1657 chr3L 14226726 14226746 chr3L 14226959 14226979 5 233 9.5 3.0 6.2 0.7 253 chr3L 14226726 intron nuf + chr3L 14226852 intron nuf + chr3L 14226979 intron nuf + chr3L_5_14225001 chr3L_14225001 RAL-177 1658 chr3L 14236043 14236061 chr3L 14236200 14236218 7 157 8.5 7.5 8.0 0.8 175 chr3L 14236043 intergenic CG34244 - chr3L 14236130 intergenic CG34244 - chr3L 14236218 intergenic CG34244 -,CG7906 + chr3L_7_14235001 chr3L_14235001 RAL-177 1659 chr3L 14239974 14240006 chr3L 14240091 14240123 11 116 3.5 7.5 5.5 1.7 149 chr3L 14239974 intergenic not near genes chr3L 14240048 intergenic not near genes chr3L 14240123 intergenic not near genes chr3L_11_14240001 chr3L_14240001 RAL-177 1660 chr3L 14245556 14245588 chr3L 14245670 14245674 1360 10 108 2.5 6.0 4.2 1.9 118 chr3L 14245556 3` UTR CR44561 - chr3L 14245615 3` UTR CR44561 - chr3L 14245674 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 RAL-177 1661 chr3L 14267355 14267388 chr3L 14271815 14271848 F-element 7 4458 5.0 4.5 4.8 1.2 4493 chr3L 14267355 intergenic not near genes chr3L 14269602 intergenic not near genes chr3L 14271848 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-177 1662 chr3L 14295964 14296006 chr3L 14296469 14296504 roo 14 500 5.5 6.0 5.8 2.1 540 chr3L 14295964 intron fz + chr3L 14296234 intron fz + chr3L 14296504 intron fz + chr3L_14_14295001 chr3L_14295001 RAL-177 1663 chr3L 14312026 14312055 chr3L 14316839 14316880 X-element 6 4828 3.0 5.5 4.2 1.2 4854 chr3L 14312026 exon fz + chr3L 14314453 intron fz + chr3L 14316880 intron fz + chr3L_6_14310001 chr3L_14310001 RAL-177 1664 chr3L 14322499 14322552 chr3L 14322661 14322714 18 160 5.0 4.5 4.8 3.1 215 chr3L 14322499 intron fz + chr3L 14322606 intron,3` UTR fz +,CR45025 - chr3L 14322714 intron,3` UTR fz +,CR45025 - chr3L_18_14320001 chr3L_14320001 RAL-177 1665 chr3L 14356498 14356553 chr3L 14356598 14356653 16 100 3.5 2.5 3.0 4.0 155 chr3L 14356498 intron fz + chr3L 14356576 intron fz + chr3L 14356653 intron fz + chr3L_16_14355001 chr3L_14355001 RAL-177 1666 chr3L 14387634 14387681 chr3L 14387804 14387851 17 169 0.0 1.5 0.8 9.4 217 chr3L 14387634 intergenic not near genes chr3L 14387742 intergenic not near genes chr3L 14387851 intergenic not near genes chr3L_17_14385001 chr3L_14385001 RAL-177 1667 chr3L 14462878 14462911 chr3L 14462986 14463019 10 107 0.0 5.0 2.5 2.9 141 chr3L 14462878 intron bbg - chr3L 14462948 intron bbg - chr3L 14463019 intron bbg - chr3L_10_14460001 chr3L_14460001 RAL-177 1668 chr3L 14468428 14468478 chr3L 14473654 14473696 copia 16 5225 3.0 6.0 4.5 2.9 5268 chr3L 14468428 intron bbg - chr3L 14471062 intron bbg - chr3L 14473696 intron bbg - chr3L_16_14470001 chr3L_14470001 RAL-177 1669 chr3L 14485998 14486046 chr3L 14486099 14486147 13 101 5.5 3.0 4.2 2.5 149 chr3L 14485998 intron bbg - chr3L 14486072 intron bbg - chr3L 14486147 intron bbg - chr3L_13_14485001 chr3L_14485001 RAL-177 1670 chr3L 14537252 14537257 chr3L 14537356 14537361 4 104 0.0 0.0 0.0 4.0 109 chr3L 14537252 3` UTR CG43246 + chr3L 14537306 intergenic CG43246 +,Mpcp + chr3L 14537361 intergenic CG43246 +,Mpcp + chr3L_4_14535001 chr3L_14535001 RAL-177 1671 chr3L 14546803 14546810 chr3L 14546924 14546931 4 121 0.0 8.0 4.0 0.8 128 chr3L 14546803 intron CG9238 - chr3L 14546867 intron CG9238 - chr3L 14546931 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-177 1672 chr3L 14555494 14555531 chr3L 14555606 14555643 7 112 3.5 2.0 2.8 1.8 149 chr3L 14555494 intergenic not near genes chr3L 14555568 intergenic not near genes chr3L 14555643 intergenic not near genes chr3L_7_14555001 chr3L_14555001 RAL-177 1673 chr3L 14565725 14565778 chr3L 14565836 14565889 21 111 2.0 4.5 3.2 5.0 164 chr3L 14565725 intergenic not near genes chr3L 14565807 intergenic not near genes chr3L 14565889 intergenic not near genes chr3L_21_14565001 chr3L_14565001 RAL-177 1674 chr3L 14684605 14684641 chr3L 14684717 14684746 7 109 4.5 1.5 3.0 1.8 141 chr3L 14684605 intron ome + chr3L 14684676 intron ome + chr3L 14684746 intron ome + chr3L_7_14680001 chr3L_14680001 RAL-177 1675 chr3L 14725582 14725631 chr3L 14728605 14728653 Doc 7 3022 3.5 2.0 2.8 1.8 3071 chr3L 14725582 intron ome + chr3L 14727118 intron ome + chr3L 14728653 intron ome + chr3L_7_14725001 chr3L_14725001 RAL-177 1676 chr3L 14825142 14825157 chr3L 14832889 14832904 Stalker2 6 7747 2.5 5.5 4.0 1.2 7762 chr3L 14825142 intron CG17839 + chr3L 14829023 intron CG17839 + chr3L 14832904 intron CG17839 + chr3L_6_14825001 chr3L_14825001 RAL-177 1677 chr3L 14839017 14839051 chr3L 14839126 14839160 10 109 5.5 10.0 7.8 1.1 143 chr3L 14839017 intron CG17839 + chr3L 14839088 intron CG17839 + chr3L 14839160 intron CG17839 + chr3L_10_14835001 chr3L_14835001 RAL-177 1678 chr3L 14861796 14861831 chr3L 14861882 14861931 12 96 3.0 2.5 2.8 3.2 135 chr3L 14861796 intron CG17839 + chr3L 14861864 intron CG17839 + chr3L 14861931 intron CG17839 + chr3L_12_14860001 chr3L_14860001 RAL-177 1679 chr3L 14912170 14912211 chr3L 14912272 14912313 17 101 4.0 3.0 3.5 3.8 143 chr3L 14912170 intron DCX-EMAP + chr3L 14912242 intron DCX-EMAP + chr3L 14912313 intron DCX-EMAP + chr3L_17_14910001 chr3L_14910001 RAL-177 1680 chr3L 14933429 14933461 chr3L 14933531 14933563 7 102 3.0 5.5 4.2 1.3 134 chr3L 14933429 intron DCX-EMAP + chr3L 14933496 intron DCX-EMAP + chr3L 14933563 intron DCX-EMAP + chr3L_7_14930001 chr3L_14930001 RAL-177 1681 chr3L 14954348 14954389 chr3L 14956037 14956078 transib2 10 1687 4.5 5.0 4.8 1.7 1730 chr3L 14954348 intergenic not near genes chr3L 14955213 intergenic not near genes chr3L 14956078 intergenic not near genes chr3L_10_14955001 chr3L_14955001 RAL-177 1682 chr3L 14970746 14970765 chr3L 14971075 14971095 F-element 13 330 11.0 9.0 10.0 1.2 349 chr3L 14970746 intergenic Tom + chr3L 14970920 intergenic not near genes chr3L 14971095 intergenic not near genes chr3L_13_14970001 chr3L_14970001 RAL-177 1683 chr3L 15035139 15035181 chr3L 15038019 15038061 15 2877 4.0 4.0 4.0 3.0 2922 chr3L 15035139 intron Sytbeta - chr3L 15036600 intron Sytbeta - chr3L 15038061 intron Sytbeta - chr3L_15_15035001 chr3L_15035001 RAL-177 1684 chr3L 15048114 15048144 chr3L 15048458 15048488 6 344 31.5 41.5 36.5 0.2 374 chr3L 15048114 intron Sytbeta - chr3L 15048301 intron Sytbeta - chr3L 15048488 intron Sytbeta - chr3L_6_15045001 chr3L_15045001 RAL-177 1685 chr3L 15048148 15048160 chr3L 15048492 15048504 4 344 31.5 34.5 33.0 0.1 356 chr3L 15048148 intron Sytbeta - chr3L 15048326 intron Sytbeta - chr3L 15048504 intron Sytbeta - chr3L_4_15045001 chr3L_15045001 RAL-177 1686 chr3L 15085029 15085078 chr3L 15086215 15086264 1360 12 1186 5.0 4.0 4.5 2.2 1235 chr3L 15085029 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086264 intron cp309 - chr3L_12_15085001 chr3L_15085001 RAL-177 1687 chr3L 15146143 15146173 chr3L 15146240 15146282 4 103 0.0 6.5 3.2 1.0 139 chr3L 15146143 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146282 3` UTR Pex3 + chr3L_4_15145001 chr3L_15145001 RAL-177 1688 chr3L 15232896 15232916 chr3L 15232967 15233017 13 89 2.0 6.0 4.0 2.6 121 chr3L 15232896 intergenic not near genes chr3L 15232956 intergenic not near genes chr3L 15233017 intergenic not near genes chr3L_13_15230001 chr3L_15230001 RAL-177 1689 chr3L 15233535 15233580 chr3L 15233636 15233681 13 100 3.5 8.5 6.0 1.9 146 chr3L 15233535 intergenic not near genes chr3L 15233608 intergenic not near genes chr3L 15233681 intergenic not near genes chr3L_13_15230001 chr3L_15230001 RAL-177 1690 chr3L 15257413 15257451 chr3L 15257646 15257684 10 233 4.0 7.0 5.5 1.5 271 chr3L 15257413 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257684 intergenic not near genes chr3L_10_15255001 chr3L_15255001 RAL-177 1691 chr3L 15261865 15261918 chr3L 15261986 15262015 16 118 2.5 4.5 3.5 3.6 150 chr3L 15261865 intergenic not near genes chr3L 15261940 intergenic not near genes chr3L 15262015 intergenic not near genes chr3L_16_15260001 chr3L_15260001 RAL-177 1692 chr3L 15295752 15295798 chr3L 15298615 15298661 gypsy5 16 2863 7.0 6.0 6.5 2.1 2909 chr3L 15295752 intergenic not near genes chr3L 15297206 intergenic not near genes chr3L 15298661 intergenic Best4 + chr3L_16_15295001 chr3L_15295001 RAL-177 1693 chr3L 15333128 15333169 chr3L 15333229 15333262 8 100 4.0 3.0 3.5 1.8 134 chr3L 15333128 intergenic CR43247 + chr3L 15333195 intergenic CR43247 + chr3L 15333262 intergenic CR43247 + chr3L_8_15330001 chr3L_15330001 RAL-177 1694 chr3L 15395704 15395753 chr3L 15395804 15395853 10 97 4.0 2.0 3.0 2.5 149 chr3L 15395704 intergenic not near genes chr3L 15395778 intergenic not near genes chr3L 15395853 intergenic not near genes chr3L_10_15395001 chr3L_15395001 RAL-177 1695 chr3L 15423741 15423781 chr3L 15426605 15426645 opus 20 2864 7.5 5.5 6.5 2.7 2904 chr3L 15423741 intergenic not near genes chr3L 15425193 intergenic not near genes chr3L 15426645 intergenic not near genes chr3L_20_15425001 chr3L_15425001 RAL-177 1696 chr3L 15443567 15443598 chr3L 15443663 15443694 11 96 6.5 4.0 5.2 1.8 127 chr3L 15443567 intergenic not near genes chr3L 15443630 intergenic not near genes chr3L 15443694 intergenic not near genes chr3L_11_15440001 chr3L_15440001 RAL-177 1697 chr3L 15448999 15449000 chr3L 23323704 23323853 5 7874774 15.0 21.5 18.2 0.3 7874854 chr3L 15448999 intergenic not near genes chr3L 19386426 intron CG32206 - chr3L 23323853 intron alpha-Cat - chr3L_5_19385001 chr3L_19385001 RAL-177 1698 chr3L 15466018 15466036 chr3L 15466120 15466138 6 102 8.5 0.0 4.2 1.2 120 chr3L 15466018 intergenic not near genes chr3L 15466078 intergenic not near genes chr3L 15466138 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-177 1699 chr3L 15466119 15466135 chr3L 15466235 15466251 10 116 0.0 4.0 2.0 3.3 132 chr3L 15466119 intergenic not near genes chr3L 15466185 intergenic not near genes chr3L 15466251 intergenic not near genes chr3L_10_15465001 chr3L_15465001 RAL-177 1700 chr3L 15482587 15482628 chr3L 15482688 15482729 10 100 3.5 4.0 3.8 2.1 142 chr3L 15482587 intergenic not near genes chr3L 15482658 intergenic not near genes chr3L 15482729 intergenic not near genes chr3L_10_15480001 chr3L_15480001 RAL-177 1701 chr3L 15493296 15493346 chr3L 15493411 15493461 4 114 2.0 0.0 1.0 2.0 165 chr3L 15493296 exon CG12355 - chr3L 15493378 intron CG12355 - chr3L 15493461 intron CG12355 - chr3L_4_15490001 chr3L_15490001 RAL-177 1702 chr3L 15541599 15541652 chr3L 15541710 15541763 15 110 4.5 3.5 4.0 3.0 164 chr3L 15541599 intron CrebA + chr3L 15541681 intron CrebA + chr3L 15541763 intron CrebA + chr3L_15_15540001 chr3L_15540001 RAL-177 1703 chr3L 15554901 15554946 chr3L 15556708 15556753 S-element 16 1807 12.0 10.5 11.2 1.3 1852 chr3L 15554901 intron AGO2 + chr3L 15555827 intron AGO2 + chr3L 15556753 intron AGO2 + chr3L_16_15555001 chr3L_15555001 RAL-177 1704 chr3L 15629882 15629912 chr3L 15630026 15630056 13 142 3.0 2.5 2.8 3.4 174 chr3L 15629882 intron comm3 - chr3L 15629969 intron comm3 - chr3L 15630056 intron comm3 - chr3L_13_15625001 chr3L_15625001 RAL-177 1705 chr3L 15633165 15633188 chr3L 15633265 15633288 6 100 5.5 2.5 4.0 1.2 123 chr3L 15633165 intron comm3 - chr3L 15633226 intron comm3 - chr3L 15633288 intron comm3 - chr3L_6_15630001 chr3L_15630001 RAL-177 1706 chr3L 15760661 15760716 chr3L 15760766 15760819 13 101 6.5 3.5 5.0 2.2 158 chr3L 15760661 intergenic not near genes chr3L 15760740 intergenic not near genes chr3L 15760819 intergenic not near genes chr3L_13_15760001 chr3L_15760001 RAL-177 1707 chr3L 15778563 15778605 chr3L 15778665 15778707 17 102 3.0 6.5 4.8 2.9 144 chr3L 15778563 intergenic not near genes chr3L 15778635 intergenic not near genes chr3L 15778707 intergenic not near genes chr3L_17_15775001 chr3L_15775001 RAL-177 1708 chr3L 15781634 15781676 chr3L 15781785 15781845 6 163 0.0 0.0 0.0 6.0 211 chr3L 15781634 intergenic not near genes chr3L 15781740 intergenic not near genes chr3L 15781845 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-177 1709 chr3L 15846625 15846677 chr3L 15846735 15846787 23 109 4.5 5.0 4.8 4.0 162 chr3L 15846625 intergenic not near genes chr3L 15846706 intergenic not near genes chr3L 15846787 intergenic not near genes chr3L_23_15845001 chr3L_15845001 RAL-177 1710 chr3L 15871578 15871610 chr3L 15871682 15871714 12 104 5.5 6.0 5.8 1.8 136 chr3L 15871578 intron pHCl - chr3L 15871646 intron pHCl - chr3L 15871714 intron pHCl - chr3L_12_15870001 chr3L_15870001 RAL-177 1711 chr3L 15880576 15880625 chr3L 15880676 15880719 6 86 1.0 4.5 2.8 1.6 143 chr3L 15880576 intron pHCl - chr3L 15880648 intron pHCl - chr3L 15880719 intron pHCl - chr3L_6_15880001 chr3L_15880001 RAL-177 1712 chr3L 15883197 15883211 chr3L 15883510 15883524 7 311 6.5 4.0 5.2 1.1 327 chr3L 15883197 intron pHCl - chr3L 15883360 intron pHCl - chr3L 15883524 intron pHCl - chr3L_7_15880001 chr3L_15880001 RAL-177 1713 chr3L 15916825 15916858 chr3L 15916922 15916955 6 97 5.0 2.5 3.8 1.2 130 chr3L 15916825 intron sff - chr3L 15916890 intron sff - chr3L 15916955 intron sff - chr3L_6_15915001 chr3L_15915001 RAL-177 1714 chr3L 15929217 15929230 chr3L 15938384 15938396 roo 12 9167 0.0 3.0 1.5 4.8 9179 chr3L 15929217 intron Pka-C3 - chr3L 15933806 intron Pka-C3 - chr3L 15938396 intron Pka-C3 - chr3L_12_15930001 chr3L_15930001 RAL-177 1715 chr3L 16069255 16069305 chr3L 16069351 16069414 25 106 5.5 0.0 2.8 6.6 159 chr3L 16069255 intron Mbs + chr3L 16069334 intron Mbs + chr3L 16069414 intron Mbs + chr3L_25_16065001 chr3L_16065001 RAL-177 1716 chr3L 16184093 16184135 chr3L 16188925 16188974 X-element 20 4838 4.5 5.0 4.8 3.4 4881 chr3L 16184093 intergenic not near genes chr3L 16186534 intergenic not near genes chr3L 16188974 intergenic not near genes chr3L_20_16185001 chr3L_16185001 RAL-177 1717 chr3L 16212790 16212839 chr3L 16212901 16212950 15 109 8.0 3.5 5.8 2.2 160 chr3L 16212790 intergenic CG13073 - chr3L 16212870 intergenic CG13073 - chr3L 16212950 intergenic CG13073 - chr3L_15_16210001 chr3L_16210001 RAL-177 1718 chr3L 16217007 16217026 chr3L 16217083 16217122 9 99 4.0 2.5 3.2 2.1 115 chr3L 16217007 intron CG13073 - chr3L 16217064 intron CG13073 - chr3L 16217122 5` UTR CG13073 - chr3L_9_16215001 chr3L_16215001 RAL-177 1719 chr3L 16234984 16235034 chr3L 16235093 16235142 16 109 5.0 7.5 6.2 2.2 158 chr3L 16234984 exon l(3)72Dp + chr3L 16235063 intron l(3)72Dp + chr3L 16235142 intron l(3)72Dp + chr3L_16_16235001 chr3L_16235001 RAL-177 1720 chr3L 16239930 16239948 chr3L 16240026 16240044 4 96 3.0 4.5 3.8 0.8 114 chr3L 16239930 intergenic l(3)72Dr + chr3L 16239987 intergenic not near genes chr3L 16240044 intergenic not near genes chr3L_4_16235001 chr3L_16235001 RAL-177 1721 chr3L 16260161 16260209 chr3L 16260274 16260322 26 112 7.5 6.0 6.8 3.3 161 chr3L 16260161 intergenic CG13053 - chr3L 16260242 intergenic not near genes chr3L 16260322 intergenic not near genes chr3L_26_16260001 chr3L_16260001 RAL-177 1722 chr3L 16279065 16279104 chr3L 16279166 16279205 13 101 2.5 2.0 2.2 4.1 140 chr3L 16279065 exon CG13050 - chr3L 16279135 intron CG13050 - chr3L 16279205 exon CG13050 - chr3L_13_16275001 chr3L_16275001 RAL-177 1723 chr3L 16305386 16305396 chr3L 16305515 16305519 5 139 3.0 2.5 2.8 1.3 133 chr3L 16305386 exon CG13043 - chr3L 16305452 exon CG13043 - chr3L 16305519 exon CG13043 - chr3L_5_16305001 chr3L_16305001 RAL-177 1724 chr3L 16312697 16312710 chr3L 16312827 16312840 5 130 4.0 0.0 2.0 1.7 143 chr3L 16312697 intergenic not near genes chr3L 16312768 intergenic not near genes chr3L 16312840 intergenic not near genes chr3L_5_16310001 chr3L_16310001 RAL-177 1725 chr3L 16340251 16340288 chr3L 16340395 16340432 12 143 4.5 4.0 4.2 2.3 181 chr3L 16340251 intron CG4998 + chr3L 16340342 intron CG4998 + chr3L 16340432 intron CG4998 + chr3L_12_16340001 chr3L_16340001 RAL-177 1726 chr3L 16443827 16443875 chr3L 16446187 16446235 Doc 8 2360 2.0 1.0 1.5 3.2 2408 chr3L 16443827 intron,intron CG33158 +,dsx-c73A - chr3L 16445031 intron,intron CG33158 +,dsx-c73A - chr3L 16446235 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-177 1727 chr3L 16450022 16450031 chr3L 16450127 16450136 8 105 0.0 2.5 1.2 3.6 114 chr3L 16450022 intron,intron CG33158 +,dsx-c73A - chr3L 16450079 intron,intron CG33158 +,dsx-c73A - chr3L 16450136 intron,intron CG33158 +,dsx-c73A - chr3L_8_16450001 chr3L_16450001 RAL-177 1728 chr3L 16450035 16450053 chr3L 16450105 16450154 8 100 0.0 2.0 1.0 4.0 119 chr3L 16450035 intron,intron CG33158 +,dsx-c73A - chr3L 16450094 intron,intron CG33158 +,dsx-c73A - chr3L 16450154 intron,exon CG33158 +,dsx-c73A - chr3L_8_16450001 chr3L_16450001 RAL-177 1729 chr3L 16493963 16494004 chr3L 16494500 16494529 jockey 11 533 4.5 4.0 4.2 2.1 566 chr3L 16493963 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494246 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494529 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_11_16490001 chr3L_16490001 RAL-177 1730 chr3L 16533445 16533448 chr3L 20579166 20579169 4 4045721 1.5 19.0 10.2 0.4 4045724 chr3L 16533445 intron CG43373 - chr3L 18556307 intergenic not near genes chr3L 20579169 intergenic not near genes chr3L_4_18555001 chr3L_18555001 RAL-177 1731 chr3L 16537832 16537879 chr3L 16537939 16537986 20 105 0.0 3.0 1.5 8.0 154 chr3L 16537832 intron CG43373 - chr3L 16537909 intron CG43373 - chr3L 16537986 intron CG43373 - chr3L_20_16535001 chr3L_16535001 RAL-177 1732 chr3L 16540042 16540078 chr3L 16540144 16540186 6 107 4.5 3.5 4.0 1.2 144 chr3L 16540042 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540186 intron CG43373 - chr3L_6_16540001 chr3L_16540001 RAL-177 1733 chr3L 16563216 16563247 chr3L 16563312 16563321 13 95 3.5 0.0 1.8 4.6 105 chr3L 16563216 intergenic Mipp1 - chr3L 16563268 intergenic Mipp1 - chr3L 16563321 intergenic Mipp1 - chr3L_13_16560001 chr3L_16560001 RAL-177 1734 chr3L 16610663 16610707 chr3L 16610768 16610812 16 103 9.5 2.5 6.0 2.3 149 chr3L 16610663 3` UTR Su(P) - chr3L 16610738 exon Su(P) - chr3L 16610812 exon Su(P) - chr3L_16_16610001 chr3L_16610001 RAL-177 1735 chr3L 16616493 16616538 chr3L 16621841 16621886 297 13 5342 7.5 5.0 6.2 1.8 5393 chr3L 16616493 3` UTR Abl - chr3L 16619190 3` UTR Abl - chr3L 16621886 3` UTR Abl - chr3L_13_16615001 chr3L_16615001 RAL-177 1736 chr3L 16632253 16632261 chr3L 16632425 16632432 4 181 7.0 1.0 4.0 0.8 179 chr3L 16632253 intron Abl - chr3L 16632342 intron Abl - chr3L 16632432 intron Abl - chr3L_4_16630001 chr3L_16630001 RAL-177 1737 chr3L 16681851 16681880 chr3L 16681950 16681991 8 105 5.0 3.5 4.2 1.5 140 chr3L 16681851 intron,intron Lasp -,CG43954 - chr3L 16681921 intron,intron Lasp -,CG43954 - chr3L 16681991 intron,intron Lasp -,CG43954 - chr3L_8_16680001 chr3L_16680001 RAL-177 1738 chr3L 16684002 16684046 chr3L 16689243 16689287 copia 20 5241 6.0 8.0 7.0 2.5 5285 chr3L 16684002 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689287 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_20_16685001 chr3L_16685001 RAL-177 1739 chr3L 16757635 16757666 chr3L 16757745 16757776 11 110 4.0 6.5 5.2 1.8 141 chr3L 16757635 intergenic not near genes chr3L 16757706 intergenic not near genes chr3L 16757776 intergenic not near genes chr3L_11_16755001 chr3L_16755001 RAL-177 1740 chr3L 16800572 16800599 chr3L 16800730 16800757 7 156 6.5 2.0 4.2 1.3 185 chr3L 16800572 intron CG9674 - chr3L 16800664 intron CG9674 - chr3L 16800757 intron CG9674 - chr3L_7_16800001 chr3L_16800001 RAL-177 1741 chr3L 16818727 16818780 chr3L 16818823 16818876 23 94 6.0 5.0 5.5 3.5 149 chr3L 16818727 intron,intron nudC +,CG13024 - chr3L 16818802 intron,intron nudC +,CG13024 - chr3L 16818876 intron,intron nudC +,CG13024 - chr3L_23_16815001 chr3L_16815001 RAL-177 1742 chr3L 16845009 16845044 chr3L 16845142 16845177 6 133 1.0 6.5 3.8 1.2 168 chr3L 16845009 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845093 intergenic CG9669 -,CG9715 + chr3L 16845177 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-177 1743 chr3L 16861022 16861054 chr3L 16861129 16861176 17 121 3.5 5.5 4.5 3.1 154 chr3L 16861022 intron,exon Rh4 -,CG13029 + chr3L 16861099 intron,intron Rh4 -,CG13029 + chr3L 16861176 intron,exon Rh4 -,CG13029 + chr3L_17_16860001 chr3L_16860001 RAL-177 1744 chr3L 16869560 16869600 chr3L 16869663 16869703 10 102 4.5 4.5 4.5 1.8 143 chr3L 16869560 intron Lmpt + chr3L 16869632 intron Lmpt + chr3L 16869703 intron Lmpt + chr3L_10_16865001 chr3L_16865001 RAL-177 1745 chr3L 16941383 16941421 chr3L 16941504 16941542 12 121 6.0 0.0 3.0 3.0 159 chr3L 16941383 intron Cpr73D - chr3L 16941462 intron Cpr73D - chr3L 16941542 intron Cpr73D - chr3L_12_16940001 chr3L_16940001 RAL-177 1746 chr3L 16945708 16945759 chr3L 16954881 16954923 roo 13 9164 4.0 1.5 2.8 3.4 9215 chr3L 16945708 exon Obp73a + chr3L 16950316 intergenic not near genes chr3L 16954923 5` UTR Nc73EF + chr3L_13_16950001 chr3L_16950001 RAL-177 1747 chr3L 16973359 16973378 chr3L 23583082 23583082 5 6609719 7.5 9.0 8.2 0.5 6609723 chr3L 16973359 intron Exn + chr3L 20278220 exon gogo - chr3L 23583082 intron AGO3 + chr3L_5_20275001 chr3L_20275001 RAL-177 1748 chr3L 16986769 16986784 chr3L 16986873 16986888 10 104 9.5 2.0 5.8 1.5 119 chr3L 16986769 intron Exn + chr3L 16986828 intron Exn + chr3L 16986888 intron Exn + chr3L_10_16985001 chr3L_16985001 RAL-177 1749 chr3L 17027374 17027426 chr3L 17027476 17027529 18 101 6.0 6.5 6.2 2.5 155 chr3L 17027374 intergenic CG7730 +,Fit2 + chr3L 17027452 intergenic CG7730 +,Fit2 + chr3L 17027529 5` UTR CG7730 + chr3L_18_17025001 chr3L_17025001 RAL-177 1750 chr3L 17032452 17032485 chr3L 17032578 17032621 9 130 2.5 6.0 4.2 1.7 169 chr3L 17032452 3` UTR CR45756 - chr3L 17032536 3` UTR CR45756 - chr3L 17032621 intergenic CR45756 -,CR43250 - chr3L_9_17030001 chr3L_17030001 RAL-177 1751 chr3L 17034913 17034967 chr3L 17035121 17035175 G2 12 208 1.5 4.5 3.0 3.0 262 chr3L 17034913 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035175 intergenic beg + chr3L_12_17035001 chr3L_17035001 RAL-177 1752 chr3L 17071880 17071919 chr3L 17071970 17072018 18 99 3.5 4.5 4.0 3.6 138 chr3L 17071880 intron Rbp6 - chr3L 17071949 intron Rbp6 - chr3L 17072018 intron Rbp6 - chr3L_18_17070001 chr3L_17070001 RAL-177 1753 chr3L 17084984 17085033 chr3L 17094153 17094202 roo 25 9169 8.0 6.0 7.0 3.1 9218 chr3L 17084984 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094202 intron Rbp6 - chr3L_25_17085001 chr3L_17085001 RAL-177 1754 chr3L 17149143 17149164 chr3L 17149244 17149265 8 101 8.0 0.0 4.0 1.6 122 chr3L 17149143 intron Rbp6 - chr3L 17149204 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_8_17145001 chr3L_17145001 RAL-177 1755 chr3L 17202451 17202496 chr3L 17202633 17202678 11 182 4.5 5.5 5.0 1.8 227 chr3L 17202451 intron Rbp6 - chr3L 17202564 intron Rbp6 - chr3L 17202678 intron Rbp6 - chr3L_11_17200001 chr3L_17200001 RAL-177 1756 chr3L 17272221 17272258 chr3L 17272374 17272411 9 152 1.5 4.5 3.0 2.2 190 chr3L 17272221 intergenic not near genes chr3L 17272316 intergenic not near genes chr3L 17272411 intergenic not near genes chr3L_9_17270001 chr3L_17270001 RAL-177 1757 chr3L 17331047 17331095 chr3L 17331157 17331205 17 110 3.5 3.5 3.5 3.8 158 chr3L 17331047 intergenic not near genes chr3L 17331126 intergenic not near genes chr3L 17331205 intergenic not near genes chr3L_17_17330001 chr3L_17330001 RAL-177 1758 chr3L 17358047 17358059 chr3L 17358148 17358159 6 101 10.0 12.0 11.0 0.5 112 chr3L 17358047 3` UTR CG7692 + chr3L 17358103 intergenic CG7692 + chr3L 17358159 intergenic CG7692 + chr3L_6_17355001 chr3L_17355001 RAL-177 1759 chr3L 17367424 17367459 chr3L 17367538 17367573 12 114 5.0 10.0 7.5 1.4 149 chr3L 17367424 intergenic CR45688 +,Cad74A - chr3L 17367498 intergenic CR45688 +,Cad74A - chr3L 17367573 intergenic Cad74A -,CR45688 + chr3L_12_17365001 chr3L_17365001 RAL-177 1760 chr3L 17408892 17408924 chr3L 17408988 17409020 7 96 8.0 0.0 4.0 1.4 128 chr3L 17408892 intron blot - chr3L 17408956 intron blot - chr3L 17409020 intron blot - chr3L_7_17405001 chr3L_17405001 RAL-177 1761 chr3L 17430478 17430497 chr3L 17430545 17430577 11 85 2.0 3.5 2.8 2.9 99 chr3L 17430478 intron,3` UTR CG32174 -,frc - chr3L 17430528 intron,3` UTR CG32174 -,frc - chr3L 17430577 intron,3` UTR CG32174 -,frc - chr3L_11_17430001 chr3L_17430001 RAL-177 1762 chr3L 17461097 17461122 chr3L 17461203 17461228 6 106 1.5 1.5 1.5 2.4 131 chr3L 17461097 intergenic not near genes chr3L 17461162 intergenic not near genes chr3L 17461228 intergenic not near genes chr3L_6_17460001 chr3L_17460001 RAL-177 1763 chr3L 17516976 17517011 chr3L 17524539 17524567 412 5 7571 5.0 5.5 5.2 0.8 7591 chr3L 17516976 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524567 3` UTR CG7564 + chr3L_5_17520001 chr3L_17520001 RAL-177 1764 chr3L 17787664 17787692 chr3L 17787777 17787805 9 113 8.5 7.0 7.8 1.0 141 chr3L 17787664 intergenic not near genes chr3L 17787734 intergenic not near genes chr3L 17787805 intergenic not near genes chr3L_9_17785001 chr3L_17785001 RAL-177 1765 chr3L 17790600 17790628 chr3L 17790885 17790913 11 285 2.5 9.5 6.0 1.6 313 chr3L 17790600 intergenic CG42815 - chr3L 17790756 intergenic CG42815 - chr3L 17790913 intergenic CG42815 - chr3L_11_17790001 chr3L_17790001 RAL-177 1766 chr3L 17799788 17799842 chr3L 17801597 17801648 S-element 32 1809 5.0 3.0 4.0 6.4 1860 chr3L 17799788 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801648 intron NUCB1 - chr3L_32_17800001 chr3L_17800001 RAL-177 1767 chr3L 17884672 17884712 chr3L 17884792 17884832 19 120 4.0 4.0 4.0 3.8 160 chr3L 17884672 intergenic CG5506 - chr3L 17884752 intergenic CG5506 - chr3L 17884832 intergenic CG5506 - chr3L_19_17880001 chr3L_17880001 RAL-177 1768 chr3L 17887857 17887878 chr3L 17887962 17887983 8 105 3.0 11.5 7.2 1.0 126 chr3L 17887857 intron CG7402 + chr3L 17887920 intron CG7402 + chr3L 17887983 intron CG7402 + chr3L_8_17885001 chr3L_17885001 RAL-177 1769 chr3L 17918358 17918404 chr3L 17921176 17921227 opus 8 2820 2.0 6.5 4.2 1.5 2869 chr3L 17918358 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921227 intergenic not near genes chr3L_8_17915001 chr3L_17915001 RAL-177 1770 chr3L 18006200 18006249 chr3L 18006344 18006393 23 144 9.5 5.0 7.2 2.8 193 chr3L 18006200 intron Eip75B - chr3L 18006296 intron Eip75B - chr3L 18006393 intron Eip75B - chr3L_23_18005001 chr3L_18005001 RAL-177 1771 chr3L 18024024 18024059 chr3L 18024147 18024182 16 122 4.5 0.0 2.2 5.0 158 chr3L 18024024 intron Eip75B - chr3L 18024103 intron Eip75B - chr3L 18024182 intron Eip75B - chr3L_16_18020001 chr3L_18020001 RAL-177 1772 chr3L 18047685 18047738 chr3L 18056762 18056805 roo 15 9076 6.0 4.0 5.0 2.5 9120 chr3L 18047685 intron Eip75B - chr3L 18052245 intron Eip75B - chr3L 18056805 intron Eip75B - chr3L_15_18050001 chr3L_18050001 RAL-177 1773 chr3L 18064041 18064075 chr3L 18064147 18064181 9 104 3.5 5.0 4.2 1.7 140 chr3L 18064041 intron Eip75B - chr3L 18064111 intron Eip75B - chr3L 18064181 intron Eip75B - chr3L_9_18060001 chr3L_18060001 RAL-177 1774 chr3L 18075230 18075253 chr3L 18075515 18075538 12 285 7.5 2.0 4.8 2.1 308 chr3L 18075230 intergenic not near genes chr3L 18075384 intergenic not near genes chr3L 18075538 intergenic not near genes chr3L_12_18075001 chr3L_18075001 RAL-177 1775 chr3L 18107595 18107648 chr3L 18107707 18107761 30 113 4.0 6.5 5.2 4.8 166 chr3L 18107595 intergenic mRpS26 +,CG5147 - chr3L 18107678 intergenic CG5147 -,mRpS26 + chr3L 18107761 intergenic CG5147 -,mRpS26 + chr3L_30_18105001 chr3L_18105001 RAL-177 1776 chr3L 18119619 18119679 chr3L 18119751 18119759 13 116 0.0 4.0 2.0 4.3 140 chr3L 18119619 intron CG7341 + chr3L 18119689 intron CG7341 + chr3L 18119759 intron CG7341 + chr3L_13_18115001 chr3L_18115001 RAL-177 1777 chr3L 18136669 18136683 chr3L 18136767 18136781 7 98 0.0 3.0 1.5 2.8 112 chr3L 18136669 intergenic CR44669 - chr3L 18136725 intergenic CR44669 - chr3L 18136781 intergenic not near genes chr3L_7_18135001 chr3L_18135001 RAL-177 1778 chr3L 18138589 18138614 chr3L 18138693 18138718 7 103 4.0 3.5 3.8 1.5 129 chr3L 18138589 intergenic not near genes chr3L 18138654 intergenic not near genes chr3L 18138718 intergenic not near genes chr3L_7_18135001 chr3L_18135001 RAL-177 1779 chr3L 18150304 18150319 chr3L 18150549 18150564 8 245 0.0 5.0 2.5 2.3 260 chr3L 18150304 intron CG7330 + chr3L 18150434 intron CG7330 + chr3L 18150564 intron CG7330 + chr3L_8_18150001 chr3L_18150001 RAL-177 1780 chr3L 18152713 18152755 chr3L 18152843 18152885 12 130 6.0 6.0 6.0 1.7 172 chr3L 18152713 intron CG7330 + chr3L 18152799 intron CG7330 + chr3L 18152885 intron CG7330 + chr3L_12_18150001 chr3L_18150001 RAL-177 1781 chr3L 18198930 18198931 chr3L 24821493 24821494 8 6622563 0.0 16.5 8.2 0.9 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-177 1782 chr3L 18221101 18221110 chr3L 18221197 18221201 5 97 0.0 0.0 0.0 5.0 100 chr3L 18221101 intergenic not near genes chr3L 18221151 intergenic not near genes chr3L 18221201 intergenic not near genes chr3L_5_18220001 chr3L_18220001 RAL-177 1783 chr3L 18223143 18223185 chr3L 18223246 18223300 13 100 5.0 0.0 2.5 3.7 157 chr3L 18223143 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223300 intergenic not near genes chr3L_13_18220001 chr3L_18220001 RAL-177 1784 chr3L 18301330 18301378 chr3L 18301439 18301487 21 109 0.5 3.5 2.0 7.0 157 chr3L 18301330 intergenic CG13700 - chr3L 18301408 intergenic CG13700 - chr3L 18301487 intergenic CG13700 - chr3L_21_18300001 chr3L_18300001 RAL-177 1785 chr3L 9013689 9013695 chr3L 18417066 18417066 5 9403375 18.5 15.5 17.0 0.3 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-177 1786 chr3L 18445229 18445282 chr3L 18445327 18445380 15 95 6.0 2.5 4.2 2.9 151 chr3L 18445229 intergenic not near genes chr3L 18445304 intergenic not near genes chr3L 18445380 intergenic not near genes chr3L_15_18445001 chr3L_18445001 RAL-177 1787 chr3L 18448598 18448611 chr3L 18448710 18448723 5 112 7.0 4.0 5.5 0.8 125 chr3L 18448598 intergenic not near genes chr3L 18448660 intergenic not near genes chr3L 18448723 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-177 1788 chr3L 18456252 18456303 chr3L 18456360 18456411 12 108 5.0 4.0 4.5 2.2 159 chr3L 18456252 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456411 3` UTR CR44670 - chr3L_12_18455001 chr3L_18455001 RAL-177 1789 chr3L 18464503 18464508 chr3L 18464573 18464579 4 88 4.5 1.0 2.8 1.1 76 chr3L 18464503 intergenic not near genes chr3L 18464541 intergenic not near genes chr3L 18464579 intergenic not near genes chr3L_4_18460001 chr3L_18460001 RAL-177 1790 chr3L 18479068 18479096 chr3L 18479164 18479218 8 104 2.5 3.0 2.8 2.1 150 chr3L 18479068 5` UTR CR44673 + chr3L 18479143 5` UTR CR44673 + chr3L 18479218 5` UTR CR44673 + chr3L_8_18475001 chr3L_18475001 RAL-177 1791 chr3L 18479399 18479433 chr3L 18479943 18479977 18 542 3.5 4.0 3.8 3.8 578 chr3L 18479399 intergenic CR44673 + chr3L 18479688 intergenic CR44673 + chr3L 18479977 intergenic not near genes chr3L_18_18475001 chr3L_18475001 RAL-177 1792 chr3L 18506104 18506112 chr3L 18509597 18509605 F-element 5 3492 12.0 9.0 10.5 0.4 3501 chr3L 18506104 intergenic not near genes chr3L 18507854 intergenic not near genes chr3L 18509605 intergenic not near genes chr3L_5_18505001 chr3L_18505001 RAL-177 1793 chr3L 18506113 18506155 chr3L 18509596 18509648 F-element 18 3491 4.0 9.0 6.5 2.4 3535 chr3L 18506113 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509648 intergenic not near genes chr3L_18_18505001 chr3L_18505001 RAL-177 1794 chr3L 18514890 18514933 chr3L 18520104 18520144 BS 7 5210 3.0 5.0 4.0 1.4 5254 chr3L 18514890 intergenic not near genes chr3L 18517517 intergenic not near genes chr3L 18520144 intergenic not near genes chr3L_7_18515001 chr3L_18515001 RAL-177 1795 chr3L 18528612 18528657 chr3L 18537793 18537838 roo 11 9181 3.5 7.5 5.5 1.7 9226 chr3L 18528612 intergenic not near genes chr3L 18533225 intergenic not near genes chr3L 18537838 intergenic not near genes chr3L_11_18530001 chr3L_18530001 RAL-177 1796 chr3L 18545258 18545275 chr3L 18545629 18545648 4 374 1.5 3.5 2.5 1.1 390 chr3L 18545258 intergenic not near genes chr3L 18545453 intergenic not near genes chr3L 18545648 intergenic not near genes chr3L_4_18545001 chr3L_18545001 RAL-177 1797 chr3L 18567006 18567050 chr3L 18567111 18567156 10 105 2.5 4.5 3.5 2.2 150 chr3L 18567006 intron AstC-R1 + chr3L 18567081 intron AstC-R1 + chr3L 18567156 intron AstC-R1 + chr3L_10_18565001 chr3L_18565001 RAL-177 1798 chr3L 18593935 18593970 chr3L 18595935 18595960 Doc 17 1998 7.5 1.5 4.5 3.1 2025 chr3L 18593935 intergenic term - chr3L 18594948 intergenic not near genes chr3L 18595960 intergenic CR45389 + chr3L_17_18590001 chr3L_18590001 RAL-177 1799 chr3L 18638565 18638573 chr3L 18638679 18638687 4 114 13.0 2.5 7.8 0.5 122 chr3L 18638565 intron MYPT-75D + chr3L 18638626 intron MYPT-75D + chr3L 18638687 intron MYPT-75D + chr3L_4_18635001 chr3L_18635001 RAL-177 1800 chr3L 18638577 18638607 chr3L 18638670 18638721 6 102 4.5 1.5 3.0 1.5 144 chr3L 18638577 intron MYPT-75D + chr3L 18638649 intron MYPT-75D + chr3L 18638721 intron MYPT-75D + chr3L_6_18635001 chr3L_18635001 RAL-177 1801 chr3L 18656175 18656206 chr3L 18656280 18656286 5 96 7.0 3.0 5.0 0.8 111 chr3L 18656175 intron MYPT-75D + chr3L 18656230 intron MYPT-75D + chr3L 18656286 intron MYPT-75D + chr3L_5_18655001 chr3L_18655001 RAL-177 1802 chr3L 18679653 18679702 chr3L 18679779 18679828 20 122 3.5 2.0 2.8 5.3 175 chr3L 18679653 intergenic not near genes chr3L 18679740 intergenic not near genes chr3L 18679828 intergenic not near genes chr3L_20_18675001 chr3L_18675001 RAL-177 1803 chr3L 18710739 18710785 chr3L 18718711 18718757 Stalker2 25 7972 9.0 3.5 6.2 3.5 8018 chr3L 18710739 intergenic not near genes chr3L 18714748 intergenic not near genes chr3L 18718757 intergenic not near genes chr3L_25_18710001 chr3L_18710001 RAL-177 1804 chr3L 18772393 18772436 chr3L 18781094 18781137 roo 13 8701 2.5 1.5 2.0 4.3 8744 chr3L 18772393 intron ftz-f1 - chr3L 18776765 intron ftz-f1 - chr3L 18781137 intron ftz-f1 - chr3L_13_18775001 chr3L_18775001 RAL-177 1805 chr3L 18784377 18784406 chr3L 18784486 18784515 12 109 9.0 7.5 8.2 1.3 138 chr3L 18784377 intron ftz-f1 - chr3L 18784446 intron ftz-f1 - chr3L 18784515 intron ftz-f1 - chr3L_12_18780001 chr3L_18780001 RAL-177 1806 chr3L 18797307 18797331 chr3L 18797396 18797435 7 102 10.0 6.0 8.0 0.8 128 chr3L 18797307 intron ftz-f1 - chr3L 18797371 intron ftz-f1 - chr3L 18797435 intron ftz-f1 - chr3L_7_18795001 chr3L_18795001 RAL-177 1807 chr3L 18810123 18810172 chr3L 18810220 18810274 12 101 2.0 0.5 1.2 5.5 151 chr3L 18810123 intron CG14073 - chr3L 18810198 intron CG14073 - chr3L 18810274 intron CG14073 - chr3L_12_18810001 chr3L_18810001 RAL-177 1808 chr3L 18885981 18886015 chr3L 18886077 18886111 6 96 2.0 4.5 3.2 1.4 130 chr3L 18885981 intron CG3961 - chr3L 18886046 intron CG3961 - chr3L 18886111 intron CG3961 - chr3L_6_18885001 chr3L_18885001 RAL-177 1809 chr3L 18896774 18896785 chr3L 18896898 18896925 9 140 2.0 6.0 4.0 1.8 151 chr3L 18896774 intron CG3902 - chr3L 18896850 intron CG3902 - chr3L 18896925 intron CG3902 - chr3L_9_18895001 chr3L_18895001 RAL-177 1810 chr3L 18924460 18924505 chr3L 18924556 18924601 13 96 1.5 5.5 3.5 2.9 141 chr3L 18924460 intron CG32204 - chr3L 18924530 intron CG32204 - chr3L 18924601 intron CG32204 - chr3L_13_18920001 chr3L_18920001 RAL-177 1811 chr3L 18929944 18929987 chr3L 18930048 18930091 6 104 1.5 3.0 2.2 1.9 147 chr3L 18929944 intron CG32204 - chr3L 18930018 intron CG32204 - chr3L 18930091 exon CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-177 1812 chr3L 18932333 18932374 chr3L 18932485 18932526 18 151 3.0 2.0 2.5 5.1 193 chr3L 18932333 intron CG32204 - chr3L 18932430 intron CG32204 - chr3L 18932526 intron CG32204 - chr3L_18_18930001 chr3L_18930001 RAL-177 1813 chr3L 18972384 18972422 chr3L 18972470 18972507 16 91 8.0 7.0 7.5 1.9 123 chr3L 18972384 intergenic not near genes chr3L 18972446 intergenic not near genes chr3L 18972507 intergenic not near genes chr3L_16_18970001 chr3L_18970001 RAL-177 1814 chr3L 19008859 19008871 chr3L 19009184 19009229 jockey 5 344 2.0 3.5 2.8 1.3 370 chr3L 19008859 intron nkd - chr3L 19009044 intron nkd - chr3L 19009229 intron nkd - chr3L_5_19005001 chr3L_19005001 RAL-177 1815 chr3L 19012841 19012889 chr3L 19012945 19012992 11 102 7.0 3.5 5.2 1.8 151 chr3L 19012841 intron nkd - chr3L 19012916 intron nkd - chr3L 19012992 intron nkd - chr3L_11_19010001 chr3L_19010001 RAL-177 1816 chr3L 19018815 19018861 chr3L 19018926 19018973 7 111 2.0 0.0 1.0 3.5 158 chr3L 19018815 intron nkd - chr3L 19018894 intron nkd - chr3L 19018973 intron nkd - chr3L_7_19015001 chr3L_19015001 RAL-177 1817 chr3L 19086586 19086628 chr3L 19086697 19086739 9 109 6.5 4.0 5.2 1.5 153 chr3L 19086586 intergenic Mkp3 - chr3L 19086662 intergenic Mkp3 - chr3L 19086739 intergenic Mkp3 - chr3L_9_19085001 chr3L_19085001 RAL-177 1818 chr3L 19100469 19100511 chr3L 19101112 19101154 15 645 36.5 21.5 29.0 0.5 685 chr3L 19100469 intergenic Gem2 - chr3L 19100812 intergenic Gem2 - chr3L 19101154 intergenic not near genes chr3L_15_19100001 chr3L_19100001 RAL-177 1819 chr3L 19133652 19133666 chr3L 19133756 19133770 8 103 12.0 3.0 7.5 0.9 118 chr3L 19133652 intron CG14082 - chr3L 19133711 intron CG14082 - chr3L 19133770 intron CG14082 - chr3L_8_19130001 chr3L_19130001 RAL-177 1820 chr3L 19133681 19133699 chr3L 19133753 19133803 9 100 6.5 3.0 4.8 1.6 122 chr3L 19133681 intron CG14082 - chr3L 19133742 intron CG14082 - chr3L 19133803 intron CG14082 - chr3L_9_19130001 chr3L_19130001 RAL-177 1821 chr3L 19138133 19138153 chr3L 19138235 19138267 7 111 0.5 7.5 4.0 1.4 134 chr3L 19138133 intron CG14082 - chr3L 19138200 intron CG14082 - chr3L 19138267 intron CG14082 - chr3L_7_19135001 chr3L_19135001 RAL-177 1822 chr3L 19182366 19182417 chr3L 19182467 19182518 16 100 5.5 3.5 4.5 2.9 152 chr3L 19182366 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182518 intron fz2 - chr3L_16_19180001 chr3L_19180001 RAL-177 1823 chr3L 19186923 19186971 chr3L 19187039 19187087 19 116 7.0 4.0 5.5 2.9 164 chr3L 19186923 intron fz2 - chr3L 19187005 intron fz2 - chr3L 19187087 intron fz2 - chr3L_19_19185001 chr3L_19185001 RAL-177 1824 chr3L 19208050 19208088 chr3L 19209433 19209482 Doc 11 1390 4.5 4.5 4.5 2.0 1432 chr3L 19208050 intron fz2 - chr3L 19208766 intron fz2 - chr3L 19209482 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-177 1825 chr3L 19210104 19210113 chr3L 19210220 19210229 4 116 0.0 2.5 1.2 1.8 125 chr3L 19210104 intron fz2 - chr3L 19210166 intron fz2 - chr3L 19210229 intron fz2 - chr3L_4_19210001 chr3L_19210001 RAL-177 1826 chr3L 19238712 19238752 chr3L 19238839 19238879 15 126 3.0 7.5 5.2 2.4 167 chr3L 19238712 intergenic not near genes chr3L 19238796 intergenic not near genes chr3L 19238879 intergenic not near genes chr3L_15_19235001 chr3L_19235001 RAL-177 1827 chr3L 19262204 19262244 chr3L 19262290 19262346 18 100 3.0 10.0 6.5 2.4 142 chr3L 19262204 3` UTR Bet1 + chr3L 19262275 3` UTR,3` UTR Bet1 +,Max - chr3L 19262346 3` UTR,3` UTR Bet1 +,Max - chr3L_18_19260001 chr3L_19260001 RAL-177 1828 chr3L 19263217 19263241 chr3L 19263398 19263407 9 179 14.5 1.5 8.0 1.0 190 chr3L 19263217 intron Max - chr3L 19263312 intron Max - chr3L 19263407 intron Max - chr3L_9_19260001 chr3L_19260001 RAL-177 1829 chr3L 19274163 19274213 chr3L 19274262 19274274 19 94 5.0 7.5 6.2 2.6 111 chr3L 19274163 3` UTR CG14085 + chr3L 19274218 intergenic CG14085 + chr3L 19274274 intergenic CG14085 + chr3L_19_19270001 chr3L_19270001 RAL-177 1830 chr3L 19289095 19289137 chr3L 19289403 19289445 18 308 7.5 4.0 5.8 2.6 350 chr3L 19289095 intron Gbs-76A - chr3L 19289270 intron Gbs-76A - chr3L 19289445 intron Gbs-76A - chr3L_18_19285001 chr3L_19285001 RAL-177 1831 chr3L 19373979 19374029 chr3L 19374088 19374092 14 104 2.5 2.0 2.2 4.4 113 chr3L 19373979 intron CG32206 - chr3L 19374036 intron CG32206 - chr3L 19374092 intron CG32206 - chr3L_14_19370001 chr3L_19370001 RAL-177 1832 chr3L 19379169 19379197 chr3L 19379276 19379304 8 107 3.0 10.0 6.5 1.1 135 chr3L 19379169 intron CG32206 - chr3L 19379236 intron CG32206 - chr3L 19379304 intron CG32206 - chr3L_8_19375001 chr3L_19375001 RAL-177 1833 chr3L 19439237 19439291 chr3L 19439355 19439406 6 116 0.5 0.5 0.5 4.0 169 chr3L 19439237 intergenic not near genes chr3L 19439322 intergenic not near genes chr3L 19439406 intergenic not near genes chr3L_6_19435001 chr3L_19435001 RAL-177 1834 chr3L 19488488 19488503 chr3L 19488554 19488605 9 97 17.0 9.0 13.0 0.6 117 chr3L 19488488 intergenic pncr009:3L -,CG32212 + chr3L 19488546 intergenic pncr009:3L -,CG32212 + chr3L 19488605 intergenic pncr009:3L -,CG32212 + chr3L_9_19485001 chr3L_19485001 RAL-177 1835 chr3L 19527905 19527953 chr3L 19528004 19528052 21 96 7.5 7.0 7.2 2.6 147 chr3L 19527905 intergenic not near genes chr3L 19527978 intergenic not near genes chr3L 19528052 intergenic not near genes chr3L_21_19525001 chr3L_19525001 RAL-177 1836 chr3L 19703829 19703876 chr3L 19704003 19704050 14 174 3.5 4.0 3.8 2.9 221 chr3L 19703829 intron serp - chr3L 19703940 intron serp - chr3L 19704050 intron serp - chr3L_14_19700001 chr3L_19700001 RAL-177 1837 chr3L 19820279 19820313 chr3L 19827848 19827882 412 14 7569 6.0 4.5 5.2 2.3 7603 chr3L 19820279 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827882 intron Deaf1 + chr3L_14_19820001 chr3L_19820001 RAL-177 1838 chr3L 19848487 19848531 chr3L 19857697 19857741 roo 11 9207 7.0 5.0 6.0 1.6 9254 chr3L 19848487 intron Papss + chr3L 19853114 intron Papss + chr3L 19857741 intron Papss + chr3L_11_19850001 chr3L_19850001 RAL-177 1839 chr3L 19981188 19981195 chr3L 19981288 19981295 8 100 11.0 4.5 7.8 0.9 107 chr3L 19981188 intergenic CG17732 + chr3L 19981242 intergenic CG17732 + chr3L 19981295 intergenic CG17732 + chr3L_8_19980001 chr3L_19980001 RAL-177 1840 chr3L 19981201 19981236 chr3L 19981284 19981336 14 98 4.5 4.0 4.2 2.7 135 chr3L 19981201 intergenic CG17732 + chr3L 19981268 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_14_19980001 chr3L_19980001 RAL-177 1841 chr3L 20086767 20086798 chr3L 20086865 20086896 11 98 7.5 0.5 4.0 2.2 129 chr3L 20086767 intron sNPF-R - chr3L 20086832 intron sNPF-R - chr3L 20086896 intron sNPF-R - chr3L_11_20085001 chr3L_20085001 RAL-177 1842 chr3L 20113648 20113679 chr3L 20122915 20122948 roo 14 9274 11.0 6.0 8.5 1.5 9300 chr3L 20113648 intergenic not near genes chr3L 20118298 intergenic not near genes chr3L 20122948 intergenic not near genes chr3L_14_20115001 chr3L_20115001 RAL-177 1843 chr3L 20113681 20113691 chr3L 20122912 20122932 roo 6 9262 8.5 4.5 6.5 0.8 9251 chr3L 20113681 intergenic not near genes chr3L 20118306 intergenic not near genes chr3L 20122932 intergenic not near genes chr3L_6_20115001 chr3L_20115001 RAL-177 1844 chr3L 20143064 20143114 chr3L 20143164 20143214 14 96 3.5 4.5 4.0 2.8 150 chr3L 20143064 intergenic not near genes chr3L 20143139 intergenic not near genes chr3L 20143214 intergenic not near genes chr3L_14_20140001 chr3L_20140001 RAL-177 1845 chr3L 20150710 20150757 chr3L 20150861 20150908 24 151 8.5 4.5 6.5 3.2 198 chr3L 20150710 3` UTR CG42674 - chr3L 20150809 3` UTR CG42674 - chr3L 20150908 3` UTR CG42674 - chr3L_24_20150001 chr3L_20150001 RAL-177 1846 chr3L 20218210 20218227 chr3L 20218346 20218363 10 136 0.0 12.0 6.0 1.4 153 chr3L 20218210 intergenic CG6933 - chr3L 20218286 intergenic CG6933 - chr3L 20218363 intergenic CG6933 - chr3L_10_20215001 chr3L_20215001 RAL-177 1847 chr3L 20257318 20257338 chr3L 20258458 20258478 pogo 4 1136 7.0 2.5 4.8 0.7 1160 chr3L 20257318 intron rdgC + chr3L 20257898 intron rdgC + chr3L 20258478 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-177 1848 chr3L 20257340 20257362 chr3L 20258454 20258501 pogo 8 1132 3.0 2.5 2.8 2.1 1161 chr3L 20257340 intron rdgC + chr3L 20257920 intron rdgC + chr3L 20258501 intron rdgC + chr3L_8_20255001 chr3L_20255001 RAL-177 1849 chr3L 20283373 20283403 chr3L 20283466 20283486 9 97 4.0 4.0 4.0 1.8 113 chr3L 20283373 intron gogo - chr3L 20283430 intron gogo - chr3L 20283486 intron gogo - chr3L_9_20280001 chr3L_20280001 RAL-177 1850 chr3L 20386922 20386972 chr3L 20387040 20387042 17 117 3.0 3.0 3.0 4.2 120 chr3L 20386922 intron fbl + chr3L 20386982 intron fbl + chr3L 20387042 intron fbl + chr3L_17_20385001 chr3L_20385001 RAL-177 1851 chr3L 20476737 20476783 chr3L 20484356 20484402 springer 14 7619 6.5 7.0 6.8 1.8 7665 chr3L 20476737 3` UTR isoQC + chr3L 20480570 intergenic not near genes chr3L 20484402 3` UTR ZnT77C - chr3L_14_20480001 chr3L_20480001 RAL-177 1852 chr3L 20525228 20525228 chr3L 22908066 22908066 12 2382838 22.0 17.5 19.8 0.6 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_12_21715001 chr3L_21715001 RAL-177 1853 chr3L 20525228 20525228 chr3L 24821492 24821494 14 4296264 22.0 16.5 19.2 0.7 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_14_22670001 chr3L_22670001 RAL-177 1854 chr3L 20525229 20525229 chr3L 22908066 22908067 9 2382837 22.5 17.5 20.0 0.4 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_9_21715001 chr3L_21715001 RAL-177 1855 chr3L 20525229 20525229 chr3L 24821493 24821494 10 4296264 22.5 16.5 19.5 0.5 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_10_22670001 chr3L_22670001 RAL-177 1856 chr3L 20590063 20590085 chr3L 20590601 20590623 412 4 542 8.5 4.0 6.2 0.6 560 chr3L 20590063 intergenic not near genes chr3L 20590343 intergenic not near genes chr3L 20590623 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-177 1857 chr3L 20710740 20710757 chr3L 20710837 20710854 8 97 14.5 6.0 10.2 0.7 114 chr3L 20710740 intergenic not near genes chr3L 20710797 intergenic not near genes chr3L 20710854 intergenic not near genes chr3L_8_20710001 chr3L_20710001 RAL-177 1858 chr3L 20710767 20710793 chr3L 20710854 20710890 10 95 7.0 5.5 6.2 1.4 123 chr3L 20710767 intergenic not near genes chr3L 20710828 intergenic not near genes chr3L 20710890 intergenic not near genes chr3L_10_20710001 chr3L_20710001 RAL-177 1859 chr3L 20821273 20821301 chr3L 20824762 20824790 NOF 6 3489 3.5 4.5 4.0 1.2 3517 chr3L 20821273 intron Pka-R1 + chr3L 20823032 intron Pka-R1 + chr3L 20824790 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 RAL-177 1860 chr3L 20849252 20849301 chr3L 20849351 20849400 19 98 8.5 7.0 7.8 2.2 148 chr3L 20849252 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849400 intron CG32432 - chr3L_19_20845001 chr3L_20845001 RAL-177 1861 chr3L 20849701 20849744 chr3L 20850070 20850113 5 359 4.0 6.0 5.0 0.8 412 chr3L 20849701 intron CG32432 - chr3L 20849907 intron CG32432 - chr3L 20850113 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-177 1862 chr3L 21014899 21014942 chr3L 21023400 21023403 Tirant 9 8487 3.0 4.0 3.5 2.0 8504 chr3L 21014899 intron skd - chr3L 21019151 intron skd - chr3L 21023403 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-177 1863 chr3L 21067931 21067975 chr3L 21068031 21068075 17 95 8.5 0.5 4.5 3.1 144 chr3L 21067931 intron siz + chr3L 21068003 intron siz + chr3L 21068075 intron siz + chr3L_17_21065001 chr3L_21065001 RAL-177 1864 chr3L 21082188 21082240 chr3L 21082286 21082338 15 95 4.0 5.0 4.5 2.7 150 chr3L 21082188 intron ko - chr3L 21082263 intron ko - chr3L 21082338 intron ko - chr3L_15_21080001 chr3L_21080001 RAL-177 1865 chr3L 21093771 21093807 chr3L 21093904 21093940 13 132 3.0 5.0 4.0 2.6 169 chr3L 21093771 intron ko - chr3L 21093856 intron ko - chr3L 21093940 intron ko - chr3L_13_21090001 chr3L_21090001 RAL-177 1866 chr3L 21151849 21151895 chr3L 21156953 21156999 flea 28 5103 4.5 6.5 5.5 4.3 5150 chr3L 21151849 intron Ac78C - chr3L 21154424 intron Ac78C - chr3L 21156999 intron Ac78C - chr3L_28_21150001 chr3L_21150001 RAL-177 1867 chr3L 21163220 21163275 chr3L 21163322 21163358 7 92 2.5 6.5 4.5 1.3 138 chr3L 21163220 intron Ac78C - chr3L 21163289 intron Ac78C - chr3L 21163358 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-177 1868 chr3L 21266312 21266358 chr3L 21266412 21266458 11 98 3.0 4.0 3.5 2.4 146 chr3L 21266312 3` UTR Eip78C + chr3L 21266385 3` UTR Eip78C + chr3L 21266458 3` UTR Eip78C + chr3L_11_21265001 chr3L_21265001 RAL-177 1869 chr3L 21294818 21294869 chr3L 21294929 21294980 21 109 1.5 2.5 2.0 7.0 162 chr3L 21294818 5` UTR Cpr78Cb + chr3L 21294899 5` UTR Cpr78Cb + chr3L 21294980 5` UTR Cpr78Cb + chr3L_21_21290001 chr3L_21290001 RAL-177 1870 chr3L 21303693 21303739 chr3L 21303800 21303846 23 106 5.0 4.5 4.8 4.0 153 chr3L 21303693 intron CG11309 - chr3L 21303770 intron CG11309 - chr3L 21303846 intron CG11309 - chr3L_23_21300001 chr3L_21300001 RAL-177 1871 chr3L 21306132 21306178 chr3L 21315306 21315357 roo 20 9178 8.5 7.0 7.8 2.3 9225 chr3L 21306132 3` UTR CG7632 + chr3L 21310744 intron Pc - chr3L 21315357 3` UTR Pc - chr3L_20_21310001 chr3L_21310001 RAL-177 1872 chr3L 21372703 21372752 chr3L 21379231 21379257 McClintock 15 6526 5.5 7.0 6.2 2.1 6554 chr3L 21372703 intergenic not near genes chr3L 21375980 intergenic not near genes chr3L 21379257 intergenic not near genes chr3L_15_21375001 chr3L_21375001 RAL-177 1873 chr3L 21399648 21399684 chr3L 21399857 21399897 11 209 6.0 4.5 5.2 1.8 249 chr3L 21399648 intron rgn + chr3L 21399772 intron rgn + chr3L 21399897 intron rgn + chr3L_11_21395001 chr3L_21395001 RAL-177 1874 chr3L 21401176 21401217 chr3L 21401275 21401296 12 91 0.0 2.0 1.0 6.0 120 chr3L 21401176 intron rgn + chr3L 21401236 intron rgn + chr3L 21401296 intron rgn + chr3L_12_21400001 chr3L_21400001 RAL-177 1875 chr3L 21406980 21407021 chr3L 21407075 21407120 12 94 4.5 2.5 3.5 2.7 140 chr3L 21406980 intron rgn + chr3L 21407050 intron rgn + chr3L 21407120 intron rgn + chr3L_12_21405001 chr3L_21405001 RAL-177 1876 chr3L 21412163 21412215 chr3L 21412284 21412336 16 120 0.5 2.5 1.5 6.4 173 chr3L 21412163 intron rgn + chr3L 21412250 intron rgn + chr3L 21412336 intron rgn + chr3L_16_21410001 chr3L_21410001 RAL-177 1877 chr3L 21459842 21459886 chr3L 21459940 21459984 16 98 6.5 7.0 6.8 2.1 142 chr3L 21459842 intergenic not near genes chr3L 21459913 intergenic not near genes chr3L 21459984 intergenic not near genes chr3L_16_21455001 chr3L_21455001 RAL-177 1878 chr3L 21498851 21498866 chr3L 21500468 21500512 1360 4 1630 3.5 5.5 4.5 0.7 1661 chr3L 21498851 intron Glg1 - chr3L 21499682 intron Glg1 - chr3L 21500512 intron Glg1 - chr3L_4_21495001 chr3L_21495001 RAL-177 1879 chr3L 21584130 21584182 chr3L 21584263 21584315 20 132 2.0 6.0 4.0 4.0 185 chr3L 21584130 intergenic not near genes chr3L 21584222 intergenic not near genes chr3L 21584315 intergenic not near genes chr3L_20_21580001 chr3L_21580001 RAL-177 1880 chr3L 21608352 21608401 chr3L 21608464 21608513 12 108 2.0 6.5 4.2 2.3 161 chr3L 21608352 intron TfAP-2 + chr3L 21608432 intron TfAP-2 + chr3L 21608513 intron TfAP-2 + chr3L_12_21605001 chr3L_21605001 RAL-177 1881 chr3L 21650894 21650941 chr3L 21651090 21651128 14 188 3.5 1.5 2.5 4.0 234 chr3L 21650894 intron CG43980 + chr3L 21651011 intron CG43980 + chr3L 21651128 intron CG43980 + chr3L_14_21650001 chr3L_21650001 RAL-177 1882 chr3L 21736334 21736374 chr3L 21736555 21736595 8 218 0.0 7.0 3.5 1.8 261 chr3L 21736334 intergenic CR43888 + chr3L 21736464 intergenic CR43888 + chr3L 21736595 intergenic CR43888 + chr3L_8_21735001 chr3L_21735001 RAL-177 1883 chr3L 21749310 21749326 chr3L 21754482 21754501 Doc 5 5177 5.0 5.0 5.0 0.8 5191 chr3L 21749310 intron Syn1 - chr3L 21751906 intron Syn1 - chr3L 21754501 intron Syn1 - chr3L_5_21750001 chr3L_21750001 RAL-177 1884 chr3L 21749327 21749336 chr3L 21754477 21754506 Doc 4 5166 4.5 4.5 4.5 0.7 5179 chr3L 21749327 intron Syn1 - chr3L 21751916 intron Syn1 - chr3L 21754506 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-177 1885 chr3L 21758500 21758520 chr3L 21758877 21758897 4 377 32.0 26.0 29.0 0.1 397 chr3L 21758500 intron Syn1 - chr3L 21758698 intron Syn1 - chr3L 21758897 intron Syn1 - chr3L_4_21755001 chr3L_21755001 RAL-177 1886 chr3L 21769035 21769086 chr3L 21769142 21769193 18 107 4.0 7.0 5.5 2.8 158 chr3L 21769035 intron,intron Syn1 -,CG42689 + chr3L 21769114 intron,intron Syn1 -,CG42689 + chr3L 21769193 intron,intron Syn1 -,CG42689 + chr3L_18_21765001 chr3L_21765001 RAL-177 1887 chr3L 21776672 21776872 chr3L 21776769 21776944 16 101 2.5 8.5 5.5 2.5 272 chr3L 21776672 intron,intron CG42689 +,CG42552 + chr3L 21776808 intron,intron CG42689 +,CG42552 + chr3L 21776944 exon,intron CG42689 +,CG42552 + chr3L_16_21775001 chr3L_21775001 RAL-177 1888 chr3L 21836708 21836759 chr3L 21836814 21836865 19 105 5.0 5.0 5.0 3.2 157 chr3L 21836708 3` UTR P5CDh1 - chr3L 21836786 3` UTR P5CDh1 - chr3L 21836865 3` UTR P5CDh1 - chr3L_19_21835001 chr3L_21835001 RAL-177 1889 chr3L 21849479 21849531 chr3L 21849581 21849633 21 100 5.0 3.5 4.2 4.0 154 chr3L 21849479 intron mub + chr3L 21849556 intron mub + chr3L 21849633 intron mub + chr3L_21_21845001 chr3L_21845001 RAL-177 1890 chr3L 21852248 21852270 chr3L 21852356 21852368 4 99 5.5 2.5 4.0 0.8 120 chr3L 21852248 intron mub + chr3L 21852308 intron mub + chr3L 21852368 intron mub + chr3L_4_21850001 chr3L_21850001 RAL-177 1891 chr3L 21874977 21875027 chr3L 21875154 21875204 23 176 4.5 4.0 4.2 4.4 227 chr3L 21874977 intron mub + chr3L 21875090 intron mub + chr3L 21875204 intron mub + chr3L_23_21875001 chr3L_21875001 RAL-177 1892 chr3L 21952431 21952480 chr3L 21953194 21953243 transib1 15 762 7.0 4.5 5.8 2.2 812 chr3L 21952431 intergenic not near genes chr3L 21952837 intergenic not near genes chr3L 21953243 intergenic not near genes chr3L_15_21950001 chr3L_21950001 RAL-177 1893 chr3L 22016350 22016400 chr3L 22016486 22016515 11 131 3.5 4.0 3.8 2.3 165 chr3L 22016350 intergenic not near genes chr3L 22016432 intergenic not near genes chr3L 22016515 intergenic not near genes chr3L_11_22015001 chr3L_22015001 RAL-177 1894 chr3L 22033669 22033722 chr3L 22033767 22033800 11 93 5.5 4.0 4.8 1.9 131 chr3L 22033669 intergenic not near genes chr3L 22033734 intergenic not near genes chr3L 22033800 intergenic not near genes chr3L_11_22030001 chr3L_22030001 RAL-177 1895 chr3L 22046162 22046215 chr3L 22046285 22046338 15 123 3.0 3.0 3.0 3.8 176 chr3L 22046162 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046338 intron Oct-TyrR + chr3L_15_22045001 chr3L_22045001 RAL-177 1896 chr3L 22099657 22099705 chr3L 22105863 22105911 3S18 18 6205 8.0 7.5 7.8 2.0 6254 chr3L 22099657 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_18_22100001 chr3L_22100001 RAL-177 1897 chr3L 22124792 22124837 chr3L 22124895 22124940 10 102 3.5 5.5 4.5 1.8 148 chr3L 22124792 intergenic not near genes chr3L 22124866 intergenic not near genes chr3L 22124940 intergenic not near genes chr3L_10_22120001 chr3L_22120001 RAL-177 1898 chr3L 22137504 22137553 chr3L 22137601 22137650 13 93 7.0 3.5 5.2 2.1 146 chr3L 22137504 intron olf413 + chr3L 22137577 intron olf413 + chr3L 22137650 intron olf413 + chr3L_13_22135001 chr3L_22135001 RAL-177 1899 chr3L 22166427 22166470 chr3L 22166525 22166568 16 95 0.5 3.5 2.0 5.3 141 chr3L 22166427 intron olf413 + chr3L 22166498 intron olf413 + chr3L 22166568 intron olf413 + chr3L_16_22165001 chr3L_22165001 RAL-177 1900 chr3L 22169433 22169487 chr3L 22169546 22169600 10 110 2.5 1.5 2.0 3.3 167 chr3L 22169433 intron olf413 + chr3L 22169516 intron olf413 + chr3L 22169600 intron olf413 + chr3L_10_22165001 chr3L_22165001 RAL-177 1901 chr3L 22411352 22411388 chr3L 22411446 22411470 8 81 4.5 3.0 3.8 1.7 118 chr3L 22411352 intergenic not near genes chr3L 22411411 intergenic not near genes chr3L 22411470 intergenic not near genes chr3L_8_22410001 chr3L_22410001 RAL-177 1902 chr3L 22447183 22447229 chr3L 22447294 22447340 17 110 2.5 7.0 4.8 2.9 157 chr3L 22447183 intergenic not near genes chr3L 22447262 intergenic not near genes chr3L 22447340 intergenic not near genes chr3L_17_22445001 chr3L_22445001 RAL-177 1903 chr3L 22507130 22507146 chr3L 22507222 22507253 4 98 2.5 5.5 4.0 0.8 123 chr3L 22507130 intergenic not near genes chr3L 22507192 intergenic not near genes chr3L 22507253 intergenic not near genes chr3L_4_22505001 chr3L_22505001 RAL-177 1904 chr3L 22522677 22522728 chr3L 22522774 22522825 19 95 4.5 3.5 4.0 3.8 148 chr3L 22522677 intergenic not near genes chr3L 22522751 intergenic not near genes chr3L 22522825 intergenic not near genes chr3L_19_22520001 chr3L_22520001 RAL-177 1905 chr3L 22542874 22542915 chr3L 22543005 22543010 11 130 4.5 7.0 5.8 1.6 136 chr3L 22542874 intergenic not near genes chr3L 22542942 intergenic not near genes chr3L 22543010 intergenic not near genes chr3L_11_22540001 chr3L_22540001 RAL-177 1906 chr3L 22544373 22544421 chr3L 22544470 22544503 13 93 4.5 5.0 4.8 2.2 130 chr3L 22544373 intergenic not near genes chr3L 22544438 intergenic not near genes chr3L 22544503 intergenic not near genes chr3L_13_22540001 chr3L_22540001 RAL-177 1907 chr3L 22554413 22554446 chr3L 22554499 22554542 15 89 5.0 2.0 3.5 3.3 129 chr3L 22554413 intergenic not near genes chr3L 22554478 intergenic not near genes chr3L 22554542 intergenic not near genes chr3L_15_22550001 chr3L_22550001 RAL-177 1908 chr3L 22555748 22555802 chr3L 22563238 22563284 blood 19 7482 3.5 0.5 2.0 6.3 7536 chr3L 22555748 intergenic not near genes chr3L 22559516 intergenic not near genes chr3L 22563284 intergenic not near genes chr3L_19_22555001 chr3L_22555001 RAL-177 1909 chr3L 22569582 22569604 chr3L 22569680 22569687 6 107 1.5 4.5 3.0 1.5 105 chr3L 22569582 intergenic not near genes chr3L 22569634 intergenic not near genes chr3L 22569687 intergenic not near genes chr3L_6_22565001 chr3L_22565001 RAL-177 1910 chr3L 22577622 22577646 chr3L 22582430 22582454 Doc 10 4808 3.5 7.5 5.5 1.5 4832 chr3L 22577622 intergenic not near genes chr3L 22580038 intergenic not near genes chr3L 22582454 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-177 1911 chr3L 22617168 22617222 chr3L 22624640 22624694 blood 18 7470 2.5 4.5 3.5 4.0 7526 chr3L 22617168 intron CG14459 - chr3L 22620931 intron CG14459 - chr3L 22624694 intron CG14459 - chr3L_18_22620001 chr3L_22620001 RAL-177 1912 chr3L 22732446 22732496 chr3L 22732547 22732597 13 101 3.5 3.5 3.5 2.9 151 chr3L 22732446 intron CG11367 + chr3L 22732522 intron CG11367 + chr3L 22732597 exon CG11367 + chr3L_13_22730001 chr3L_22730001 RAL-177 1913 chr3L 22756382 22756430 chr3L 22756479 22756527 10 93 3.0 5.0 4.0 2.0 145 chr3L 22756382 intron SPoCk + chr3L 22756454 intron SPoCk + chr3L 22756527 intron SPoCk + chr3L_10_22755001 chr3L_22755001 RAL-177 1914 chr3L 22760411 22760455 chr3L 22760516 22760560 20 105 7.5 3.5 5.5 3.1 149 chr3L 22760411 intron SPoCk + chr3L 22760486 intron SPoCk + chr3L 22760560 intron SPoCk + chr3L_20_22760001 chr3L_22760001 RAL-177 1915 chr3L 22761376 22761414 chr3L 22766830 22766858 Ivk 14 5453 6.5 4.5 5.5 2.2 5482 chr3L 22761376 intron SPoCk + chr3L 22764117 intron SPoCk + chr3L 22766858 intron SPoCk + chr3L_14_22760001 chr3L_22760001 RAL-177 1916 chr3L 22838571 22838610 chr3L 22838672 22838711 6 101 5.0 6.0 5.5 0.9 140 chr3L 22838571 intergenic CG11226 + chr3L 22838641 intergenic CG11226 + chr3L 22838711 intergenic not near genes chr3L_6_22835001 chr3L_22835001 RAL-177 1917 chr3L 22853447 22853721 chr3L 22853554 22853827 30 105 1.5 8.0 4.8 5.2 380 chr3L 22853447 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853637 5` UTR CR43426 + chr3L 22853827 5` UTR CR43426 + chr3L_30_22850001 chr3L_22850001 RAL-177 1918 chr3L 22865969 22866012 chr3L 22867122 22867165 Doc 14 1152 6.0 7.0 6.5 1.9 1196 chr3L 22865969 intron CG33170 + chr3L 22866567 intron CG33170 + chr3L 22867165 intron CG33170 + chr3L_14_22865001 chr3L_22865001 RAL-177 1919 chr3L 9307795 9307796 chr3L 22908066 22908066 5 13600270 14.0 17.5 15.8 0.3 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_5_16105001 chr3L_16105001 RAL-177 1920 chr3L 19220633 19220633 chr3L 22908066 22908066 4 3687433 14.0 17.5 15.8 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-177 1921 chr3L 20525228 20525230 chr3L 22908066 22908066 63 2382837 22.5 17.5 20.0 3.0 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_63_21715001 chr3L_21715001 RAL-177 1922 chr3L 22908066 22908066 chr3L 24821492 24821495 9 1913427 17.0 16.5 16.8 0.5 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_9_23860001 chr3L_23860001 RAL-177 1923 chr3L 20525228 20525230 chr3L 22908067 22908067 28 2382837 22.5 17.0 19.8 1.3 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_28_21715001 chr3L_21715001 RAL-177 1924 chr3L 22908067 22908067 chr3L 24821492 24821494 9 1913426 17.0 16.5 16.8 0.5 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_9_23860001 chr3L_23860001 RAL-177 1925 chr3L 22980568 22980595 chr3L 22980666 22980690 9 96 2.0 2.5 2.2 2.8 122 chr3L 22980568 intergenic not near genes chr3L 22980629 intergenic not near genes chr3L 22980690 intergenic not near genes chr3L_9_22980001 chr3L_22980001 RAL-177 1926 chr3L 22989843 22989870 chr3L 22996837 22996864 297 9 6994 2.5 4.0 3.2 2.1 7021 chr3L 22989843 intergenic not near genes chr3L 22993354 intergenic not near genes chr3L 22996864 intergenic not near genes chr3L_9_22990001 chr3L_22990001 RAL-177 1927 chr3L 23009108 23009129 chr3L 23009211 23009232 4 103 2.0 5.0 3.5 0.9 124 chr3L 23009108 intron nrm + chr3L 23009170 intron nrm + chr3L 23009232 intron nrm + chr3L_4_23005001 chr3L_23005001 RAL-177 1928 chr3L 23247584 23247614 chr3L 23248408 23248455 8 826 23.5 17.5 20.5 0.4 871 chr3L 23247584 intron nAChRalpha4 + chr3L 23248020 intron nAChRalpha4 + chr3L 23248455 intron nAChRalpha4 + chr3L_8_23245001 chr3L_23245001 RAL-177 1929 chr3L 23436969 23437008 chr3L 23437131 23437159 10 164 4.0 2.5 3.2 2.4 190 chr3L 23436969 intergenic not near genes chr3L 23437064 intergenic not near genes chr3L 23437159 intergenic not near genes chr3L_10_23435001 chr3L_23435001 RAL-177 1930 chr3L 23721311 23721353 chr3L 23721407 23721449 8 91 1.0 2.0 1.5 3.2 138 chr3L 23721311 intergenic not near genes chr3L 23721380 intergenic not near genes chr3L 23721449 intergenic not near genes chr3L_8_23720001 chr3L_23720001 RAL-177 1931 chr3L 23750928 23750973 chr3L 23751117 23751164 8 185 24.0 29.5 26.8 0.3 236 chr3L 23750928 intergenic not near genes chr3L 23751046 intergenic not near genes chr3L 23751164 intergenic not near genes chr3L_8_23750001 chr3L_23750001 RAL-177 1932 chr3L 23875507 23875531 chr3L 23875606 23875632 7 94 3.5 1.5 2.5 2.0 125 chr3L 23875507 intron CG40470 - chr3L 23875570 intron CG40470 - chr3L 23875632 intron CG40470 - chr3L_7_23875001 chr3L_23875001 RAL-177 1933 chr3L 24012399 24012428 chr3L 24020760 24020789 roo 6 8358 3.5 5.5 4.5 1.1 8390 chr3L 24012399 intergenic not near genes chr3L 24016594 intergenic not near genes chr3L 24020789 intergenic not near genes chr3L_6_24015001 chr3L_24015001 RAL-177 1934 chr3L 24168774 24168818 chr3L 24176122 24176138 ZAM 4 7341 3.0 2.0 2.5 1.1 7364 chr3L 24168774 intron Snap25 + chr3L 24172456 intron Snap25 + chr3L 24176138 intron Snap25 + chr3L_4_24170001 chr3L_24170001 RAL-177 1935 chr3L 24791875 24791917 chr3L 24796674 24796716 Doc 16 4799 3.0 1.0 2.0 5.3 4841 chr3L 24791875 intergenic not near genes chr3L 24794296 intergenic not near genes chr3L 24796716 intergenic not near genes chr3L_16_24790001 chr3L_24790001 RAL-177 1936 chr3L 18198930 18198935 chr3L 24821492 24821492 11 6622562 0.0 16.5 8.2 1.2 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_11_21510001 chr3L_21510001 RAL-177 1937 chr3L 20525228 20525230 chr3L 24821492 24821492 19 4296263 22.5 16.5 19.5 0.9 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_19_22670001 chr3L_22670001 RAL-177 1938 chr3L 18198930 18198931 chr3L 24821493 24821493 10 6622562 0.0 16.5 8.2 1.1 6622563 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_10_21510001 chr3L_21510001 RAL-177 1939 chr3L 20525228 20525230 chr3L 24821493 24821493 29 4296263 22.5 16.5 19.5 1.4 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_29_22670001 chr3L_22670001 RAL-177 1940 chr3L 20525228 20525231 chr3L 24821494 24821494 5 4296265 22.5 16.5 19.5 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_5_22670001 chr3L_22670001 RAL-177 1941 chr3L 27390439 27390708 chr3L 27390680 27390807 7 118 16.0 14.0 15.0 0.4 368 chr3L 27390439 intron Dbp80 + chr3L 27390623 intron Dbp80 + chr3L 27390807 intron Dbp80 + chr3L_7_27390001 chr3L_27390001 RAL-177 1942 chr3R 2424351 2424361 chr3R 8200131 8200151 11 5775789 22.5 11.0 16.8 0.6 5775800 chr3R 2424351 intergenic not near genes chr3R 5312251 intron mtd - chr3R 8200151 intergenic not near genes chr3R_11_5310001 chr3R_5310001 RAL-177 1943 chr3R 2534133 2534161 chr3R 2541722 2541732 8 7582 15.5 11.5 13.5 0.6 7599 chr3R 2534133 intergenic not near genes chr3R 2537932 intergenic not near genes chr3R 2541732 intergenic not near genes chr3R_8_2535001 chr3R_2535001 RAL-177 1944 chr3R 4105029 4105059 chr3R 4110253 4110283 copia 6 5224 1.5 5.0 3.2 1.4 5254 chr3R 4105029 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110283 intergenic not near genes chr3R_6_4105001 chr3R_4105001 RAL-177 1945 chr3R 4132880 4132930 chr3R 4133054 4133104 15 172 2.0 3.5 2.8 3.9 224 chr3R 4132880 intron Gfat1 + chr3R 4132992 intron Gfat1 + chr3R 4133104 intron Gfat1 + chr3R_15_4130001 chr3R_4130001 RAL-177 1946 chr3R 4206051 4206104 chr3R 4211646 4211698 mdg3 21 5595 5.5 3.5 4.5 3.8 5647 chr3R 4206051 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211698 intron CG14636 - chr3R_21_4205001 chr3R_4205001 RAL-177 1947 chr3R 4366759 4366791 chr3R 4375138 4375161 roo 12 8397 3.5 3.5 3.5 2.7 8402 chr3R 4366759 3` UTR CG1090 + chr3R 4370960 intergenic not near genes chr3R 4375161 5` UTR CR44922 + chr3R_12_4370001 chr3R_4370001 RAL-177 1948 chr3R 4408393 4408433 chr3R 4412717 4412757 Juan 21 4321 8.0 4.0 6.0 3.0 4364 chr3R 4408393 intron CG32944 - chr3R 4410575 intron CG32944 - chr3R 4412757 intron CG32944 - chr3R_21_4410001 chr3R_4410001 RAL-177 1949 chr3R 4609525 4609581 chr3R 4610709 4610765 1360 22 1182 4.0 3.0 3.5 4.9 1240 chr3R 4609525 intergenic not near genes chr3R 4610145 intergenic not near genes chr3R 4610765 intergenic not near genes chr3R_22_4610001 chr3R_4610001 RAL-177 1950 chr3R 4722327 4722376 chr3R 4722484 4722523 15 156 4.5 6.5 5.5 2.3 196 chr3R 4722327 intron Nep2 - chr3R 4722425 intron Nep2 - chr3R 4722523 intron Nep2 - chr3R_15_4720001 chr3R_4720001 RAL-177 1951 chr3R 4739097 4739144 chr3R 4739194 4739241 14 96 4.0 7.0 5.5 2.2 144 chr3R 4739097 intron tacc - chr3R 4739169 intron tacc - chr3R 4739241 intron tacc - chr3R_14_4735001 chr3R_4735001 RAL-177 1952 chr3R 4769138 4769190 chr3R 4769236 4769282 15 95 4.5 3.0 3.8 3.1 144 chr3R 4769138 intron,intron atms +,CG44098 - chr3R 4769210 intron,intron atms +,CG44098 - chr3R 4769282 intron,intron atms +,CG44098 - chr3R_15_4765001 chr3R_4765001 RAL-177 1953 chr3R 4816027 4816063 chr3R 4816133 4816169 13 106 9.5 4.5 7.0 1.6 142 chr3R 4816027 intergenic CG1129 +,CG1126 + chr3R 4816098 intergenic CG1126 +,CG1129 + chr3R 4816169 intergenic CG1126 +,CG1129 + chr3R_13_4815001 chr3R_4815001 RAL-177 1954 chr3R 4887467 4887507 chr3R 4894854 4894869 rover 5 7381 4.5 2.5 3.5 1.1 7402 chr3R 4887467 intergenic not near genes chr3R 4891168 intergenic not near genes chr3R 4894869 intergenic not near genes chr3R_5_4890001 chr3R_4890001 RAL-177 1955 chr3R 4975912 4975964 chr3R 4976033 4976085 18 121 5.0 6.5 5.8 2.6 173 chr3R 4975912 intergenic not near genes chr3R 4975998 intergenic not near genes chr3R 4976085 intergenic not near genes chr3R_18_4975001 chr3R_4975001 RAL-177 1956 chr3R 5045823 5045874 chr3R 5052945 5052996 HMS-Beagle 15 7122 8.5 8.0 8.2 1.6 7173 chr3R 5045823 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052996 intergenic CR45588 - chr3R_15_5045001 chr3R_5045001 RAL-177 1957 chr3R 5067969 5068014 chr3R 5073506 5073551 mdg3 19 5534 4.5 5.0 4.8 3.3 5582 chr3R 5067969 intergenic not near genes chr3R 5070760 intergenic not near genes chr3R 5073551 intergenic not near genes chr3R_19_5070001 chr3R_5070001 RAL-177 1958 chr3R 5089179 5089228 chr3R 5089295 5089344 16 115 3.0 3.0 3.0 4.0 165 chr3R 5089179 intergenic not near genes chr3R 5089262 intergenic not near genes chr3R 5089344 intergenic not near genes chr3R_16_5085001 chr3R_5085001 RAL-177 1959 chr3R 5161943 5161970 chr3R 5162033 5162075 4 99 11.5 0.0 5.8 0.6 132 chr3R 5161943 intron dpr16 + chr3R 5162009 intron dpr16 + chr3R 5162075 intron dpr16 + chr3R_4_5160001 chr3R_5160001 RAL-177 1960 chr3R 5170252 5170294 chr3R 5170373 5170410 10 119 5.0 3.0 4.0 2.0 158 chr3R 5170252 intergenic dpr16 + chr3R 5170331 intergenic dpr16 + chr3R 5170410 intergenic dpr16 + chr3R_10_5170001 chr3R_5170001 RAL-177 1961 chr3R 5193883 5193932 chr3R 5194020 5194054 10 128 4.5 1.5 3.0 2.5 171 chr3R 5193883 intron cno - chr3R 5193968 intron cno - chr3R 5194054 intron cno - chr3R_10_5190001 chr3R_5190001 RAL-177 1962 chr3R 5236198 5236240 chr3R 5236346 5236388 16 147 3.5 4.0 3.8 3.3 190 chr3R 5236198 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236293 3` UTR rtp - chr3R 5236388 3` UTR rtp - chr3R_16_5235001 chr3R_5235001 RAL-177 1963 chr3R 5250860 5250916 chr3R 5250992 5251046 12 126 2.0 5.5 3.8 2.5 186 chr3R 5250860 intron CG12163 - chr3R 5250953 intron CG12163 - chr3R 5251046 intron CG12163 - chr3R_12_5250001 chr3R_5250001 RAL-177 1964 chr3R 5278074 5278119 chr3R 5278175 5278220 10 96 1.5 6.0 3.8 2.1 146 chr3R 5278074 intron mtd - chr3R 5278147 intron mtd - chr3R 5278220 intron mtd - chr3R_10_5275001 chr3R_5275001 RAL-177 1965 chr3R 5282974 5282991 chr3R 5283073 5283076 4 95 11.0 9.0 10.0 0.4 102 chr3R 5282974 intron mtd - chr3R 5283025 intron mtd - chr3R 5283076 intron mtd - chr3R_4_5280001 chr3R_5280001 RAL-177 1966 chr3R 5335151 5335192 chr3R 5335250 5335291 15 97 7.0 8.5 7.8 1.7 140 chr3R 5335151 intron mtd - chr3R 5335221 intron mtd - chr3R 5335291 intron mtd - chr3R_15_5335001 chr3R_5335001 RAL-177 1967 chr3R 5338381 5338427 chr3R 5343578 5343612 Rt1c 9 5195 5.5 7.5 6.5 1.2 5231 chr3R 5338381 intron mtd - chr3R 5340996 intron mtd - chr3R 5343612 intron mtd - chr3R_9_5340001 chr3R_5340001 RAL-177 1968 chr3R 5428921 5428959 chr3R 5429194 5429232 12 273 5.5 6.0 5.8 1.8 311 chr3R 5428921 intron CG14669 + chr3R 5429076 intron CG14669 + chr3R 5429232 intron CG14669 + chr3R_12_5425001 chr3R_5425001 RAL-177 1969 chr3R 5435559 5435614 chr3R 5435664 5435699 29 102 5.0 3.0 4.0 5.8 140 chr3R 5435559 intron CG14669 + chr3R 5435629 intron CG14669 + chr3R 5435699 intron CG14669 + chr3R_29_5435001 chr3R_5435001 RAL-177 1970 chr3R 5445940 5445993 chr3R 5452420 5452473 Burdock 30 6479 2.5 5.0 3.8 6.2 6533 chr3R 5445940 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452473 intron CG14669 + chr3R_30_5445001 chr3R_5445001 RAL-177 1971 chr3R 5480213 5480233 chr3R 5480314 5480328 10 100 14.0 11.0 12.5 0.7 115 chr3R 5480213 intron,3` UTR Hcs +,ksr - chr3R 5480270 intron,3` UTR Hcs +,ksr - chr3R 5480328 intron,3` UTR Hcs +,ksr - chr3R_10_5480001 chr3R_5480001 RAL-177 1972 chr3R 5726074 5726124 chr3R 5726251 5726306 18 181 8.0 3.0 5.5 2.8 232 chr3R 5726074 intergenic not near genes chr3R 5726190 intergenic not near genes chr3R 5726306 intergenic not near genes chr3R_18_5725001 chr3R_5725001 RAL-177 1973 chr3R 5746000 5746045 chr3R 5746261 5746306 pogo 14 257 7.5 8.0 7.8 1.6 306 chr3R 5746000 3` UTR Madm + chr3R 5746153 3` UTR Madm + chr3R 5746306 3` UTR Madm + chr3R_14_5745001 chr3R_5745001 RAL-177 1974 chr3R 5746995 5747030 chr3R 5753205 5753241 diver 21 6210 10.0 5.5 7.8 2.4 6246 chr3R 5746995 intergenic Madm + chr3R 5750118 intergenic not near genes chr3R 5753241 intergenic CG2091 - chr3R_21_5750001 chr3R_5750001 RAL-177 1975 chr3R 5747031 5747042 chr3R 5753202 5753253 diver 6 6204 7.0 5.0 6.0 0.9 6222 chr3R 5747031 intergenic Madm + chr3R 5750142 intergenic not near genes chr3R 5753253 intergenic CG2091 - chr3R_6_5750001 chr3R_5750001 RAL-177 1976 chr3R 5769213 5769263 chr3R 5769331 5769373 12 117 4.0 1.5 2.8 3.2 160 chr3R 5769213 intron CG2082 - chr3R 5769293 intron CG2082 - chr3R 5769373 intron CG2082 - chr3R_12_5765001 chr3R_5765001 RAL-177 1977 chr3R 5809110 5809126 chr3R 5809371 5809387 pogo 4 261 6.0 7.0 6.5 0.5 277 chr3R 5809110 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809387 3` UTR CG11000 + chr3R_4_5805001 chr3R_5805001 RAL-177 1978 chr3R 5809127 5809143 chr3R 5809365 5809404 pogo 7 249 3.0 7.0 5.0 1.2 277 chr3R 5809127 3` UTR CG11000 + chr3R 5809266 3` UTR CG11000 + chr3R 5809404 3` UTR CG11000 + chr3R_7_5805001 chr3R_5805001 RAL-177 1979 chr3R 5822367 5822403 chr3R 5823548 5823590 1360 13 1187 4.5 7.0 5.8 1.9 1223 chr3R 5822367 3` UTR CG2023 - chr3R 5822978 3` UTR CG2023 - chr3R 5823590 3` UTR CG2023 - chr3R_13_5820001 chr3R_5820001 RAL-177 1980 chr3R 5840802 5840850 chr3R 5840910 5840959 6 106 3.5 2.0 2.8 1.6 157 chr3R 5840802 intergenic CG1213 + chr3R 5840880 intergenic CG1213 + chr3R 5840959 intergenic CG1213 + chr3R_6_5840001 chr3R_5840001 RAL-177 1981 chr3R 5927548 5927564 chr3R 5927808 5927824 pogo 10 259 9.0 7.0 8.0 1.1 276 chr3R 5927548 intron CG34113 - chr3R 5927686 intron CG34113 - chr3R 5927824 intron CG34113 - chr3R_10_5925001 chr3R_5925001 RAL-177 1982 chr3R 5927567 5927584 chr3R 5927802 5927844 pogo 12 253 5.0 5.5 5.2 1.9 277 chr3R 5927567 intron CG34113 - chr3R 5927706 intron CG34113 - chr3R 5927844 intron CG34113 - chr3R_12_5925001 chr3R_5925001 RAL-177 1983 chr3R 5935341 5935391 chr3R 5935437 5935487 24 96 4.5 0.5 2.5 6.9 146 chr3R 5935341 intron CG34113 - chr3R 5935414 intron CG34113 - chr3R 5935487 intron CG34113 - chr3R_24_5935001 chr3R_5935001 RAL-177 1984 chr3R 5943387 5943417 chr3R 5943486 5943516 9 99 3.0 9.0 6.0 1.3 129 chr3R 5943387 intron CG34113 - chr3R 5943452 intron CG34113 - chr3R 5943516 intron CG34113 - chr3R_9_5940001 chr3R_5940001 RAL-177 1985 chr3R 6015959 6015994 chr3R 6024450 6024485 Tirant 15 8496 2.0 1.5 1.8 5.4 8526 chr3R 6015959 intergenic not near genes chr3R 6020222 intergenic not near genes chr3R 6024485 intergenic not near genes chr3R_15_6020001 chr3R_6020001 RAL-177 1986 chr3R 6121007 6121048 chr3R 6121103 6121144 10 95 4.5 1.0 2.8 2.6 137 chr3R 6121007 intergenic not near genes chr3R 6121076 intergenic not near genes chr3R 6121144 intergenic not near genes chr3R_10_6120001 chr3R_6120001 RAL-177 1987 chr3R 6158493 6158540 chr3R 6167096 6167143 Tirant 12 8592 3.5 4.0 3.8 2.5 8650 chr3R 6158493 intergenic not near genes chr3R 6162818 intergenic not near genes chr3R 6167143 intergenic CG1077 + chr3R_12_6160001 chr3R_6160001 RAL-177 1988 chr3R 6175156 6175200 chr3R 6182443 6182492 HMS-Beagle2 16 7288 3.5 1.5 2.5 4.6 7336 chr3R 6175156 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182492 intergenic CR45194 + chr3R_16_6175001 chr3R_6175001 RAL-177 1989 chr3R 6428795 6428837 chr3R 6428917 6428959 28 121 4.0 5.5 4.8 4.8 164 chr3R 6428795 intron gpp + chr3R 6428877 intron gpp + chr3R 6428959 intron gpp + chr3R_28_6425001 chr3R_6425001 RAL-177 1990 chr3R 6461563 6461609 chr3R 6461659 6461709 15 99 7.0 2.5 4.8 2.6 146 chr3R 6461563 intergenic not near genes chr3R 6461636 intergenic not near genes chr3R 6461709 intergenic not near genes chr3R_15_6460001 chr3R_6460001 RAL-177 1991 chr3R 6510011 6510027 chr3R 6515111 6515128 jockey 5 5101 7.0 4.0 5.5 0.8 5117 chr3R 6510011 intergenic not near genes chr3R 6512570 intergenic not near genes chr3R 6515128 intergenic not near genes chr3R_5_6510001 chr3R_6510001 RAL-177 1992 chr3R 6510028 6510048 chr3R 6515110 6515149 jockey 10 5099 4.5 4.0 4.2 1.9 5121 chr3R 6510028 intergenic not near genes chr3R 6512588 intergenic not near genes chr3R 6515149 intergenic not near genes chr3R_10_6510001 chr3R_6510001 RAL-177 1993 chr3R 6526327 6526373 chr3R 6526539 6526585 11 212 7.5 6.5 7.0 1.4 258 chr3R 6526327 intergenic not near genes chr3R 6526456 intergenic not near genes chr3R 6526585 intergenic not near genes chr3R_11_6525001 chr3R_6525001 RAL-177 1994 chr3R 6529903 6529939 chr3R 6530124 6530150 12 224 1.0 2.5 1.8 4.3 247 chr3R 6529903 3` UTR dpr11 - chr3R 6530026 3` UTR dpr11 - chr3R 6530150 3` UTR dpr11 - chr3R_12_6530001 chr3R_6530001 RAL-177 1995 chr3R 6640597 6640647 chr3R 6640693 6640743 15 96 5.5 5.5 5.5 2.3 146 chr3R 6640597 intergenic not near genes chr3R 6640670 intergenic not near genes chr3R 6640743 intergenic CG31286 + chr3R_15_6640001 chr3R_6640001 RAL-177 1996 chr3R 6664959 6664969 chr3R 6665123 6665133 5 164 12.5 2.5 7.5 0.6 174 chr3R 6664959 intron lab - chr3R 6665046 intron lab - chr3R 6665133 intron lab - chr3R_5_6665001 chr3R_6665001 RAL-177 1997 chr3R 6697302 6697305 chr3R 6697408 6697411 4 106 8.5 6.0 7.2 0.5 109 chr3R 6697302 intergenic not near genes chr3R 6697356 intergenic not near genes chr3R 6697411 intergenic not near genes chr3R_4_6695001 chr3R_6695001 RAL-177 1998 chr3R 6705667 6705716 chr3R 6705911 6705960 14 244 0.0 5.5 2.8 3.7 293 chr3R 6705667 intergenic not near genes chr3R 6705814 intergenic not near genes chr3R 6705960 intergenic not near genes chr3R_14_6705001 chr3R_6705001 RAL-177 1999 chr3R 6737487 6737527 chr3R 6739284 6739289 Doc 12 1794 3.5 2.5 3.0 3.0 1802 chr3R 6737487 intron pb - chr3R 6738388 intron pb - chr3R 6739289 intron pb - chr3R_12_6735001 chr3R_6735001 RAL-177 2000 chr3R 6828004 6828039 chr3R 6828100 6828135 20 96 4.0 4.5 4.2 3.8 131 chr3R 6828004 intron Scr - chr3R 6828070 intron Scr - chr3R 6828135 intron Scr - chr3R_20_6825001 chr3R_6825001 RAL-177 2001 chr3R 6842759 6842801 chr3R 6842862 6842904 12 100 8.5 2.0 5.2 1.9 145 chr3R 6842759 intron Scr - chr3R 6842832 intron Scr - chr3R 6842904 intron Scr - chr3R_12_6840001 chr3R_6840001 RAL-177 2002 chr3R 6856366 6856399 chr3R 6856503 6856536 12 136 3.0 2.5 2.8 3.2 170 chr3R 6856366 intergenic not near genes chr3R 6856451 intergenic not near genes chr3R 6856536 intergenic not near genes chr3R_12_6855001 chr3R_6855001 RAL-177 2003 chr3R 6914743 6914772 chr3R 6914844 6914893 7 114 4.0 4.5 4.2 1.3 150 chr3R 6914743 intron Antp - chr3R 6914818 intron Antp - chr3R 6914893 intron Antp - chr3R_7_6910001 chr3R_6910001 RAL-177 2004 chr3R 6978870 6978909 chr3R 6978975 6979014 20 102 5.0 5.0 5.0 3.3 144 chr3R 6978870 intron Antp - chr3R 6978942 intron Antp - chr3R 6979014 intron Antp - chr3R_20_6975001 chr3R_6975001 RAL-177 2005 chr3R 7103279 7103311 chr3R 7103360 7103407 13 93 4.5 2.0 3.2 3.1 128 chr3R 7103279 intron Alh - chr3R 7103343 intron Alh - chr3R 7103407 intron Alh - chr3R_13_7100001 chr3R_7100001 RAL-177 2006 chr3R 7121722 7121729 chr3R 7121825 7121832 5 103 4.0 10.5 7.2 0.6 110 chr3R 7121722 exon Alh - chr3R 7121777 intron Alh - chr3R 7121832 intron Alh - chr3R_5_7120001 chr3R_7120001 RAL-177 2007 chr3R 7126484 7126534 chr3R 7126599 7126649 22 115 4.5 6.5 5.5 3.4 165 chr3R 7126484 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126649 3` UTR CG10068 - chr3R_22_7125001 chr3R_7125001 RAL-177 2008 chr3R 7173664 7173706 chr3R 7173764 7173806 19 98 4.0 9.5 6.8 2.4 142 chr3R 7173664 intron sas + chr3R 7173735 intron sas + chr3R 7173806 intron sas + chr3R_19_7170001 chr3R_7170001 RAL-177 2009 chr3R 7217437 7217483 chr3R 7217678 7217724 18 240 6.5 2.5 4.5 3.3 287 chr3R 7217437 intergenic CG14605 -,CG14606 - chr3R 7217580 intergenic CG14605 -,CG14606 - chr3R 7217724 3` UTR CG14605 - chr3R_18_7215001 chr3R_7215001 RAL-177 2010 chr3R 7396362 7396390 chr3R 7396485 7396513 9 119 4.0 7.0 5.5 1.4 151 chr3R 7396362 intergenic not near genes chr3R 7396438 intergenic not near genes chr3R 7396513 intergenic not near genes chr3R_9_7395001 chr3R_7395001 RAL-177 2011 chr3R 7402178 7402204 chr3R 7402296 7402323 6 123 3.5 4.5 4.0 1.2 145 chr3R 7402178 intergenic not near genes chr3R 7402250 intergenic not near genes chr3R 7402323 intergenic not near genes chr3R_6_7400001 chr3R_7400001 RAL-177 2012 chr3R 7447971 7448008 chr3R 7448069 7448106 9 97 6.5 9.0 7.8 1.0 135 chr3R 7447971 intergenic not near genes chr3R 7448038 intergenic not near genes chr3R 7448106 intergenic not near genes chr3R_9_7445001 chr3R_7445001 RAL-177 2013 chr3R 7552953 7552994 chr3R 7553051 7553102 12 107 4.5 3.5 4.0 2.4 149 chr3R 7552953 intergenic not near genes chr3R 7553028 intergenic not near genes chr3R 7553102 intergenic not near genes chr3R_12_7550001 chr3R_7550001 RAL-177 2014 chr3R 7574620 7574653 chr3R 7574703 7574728 7 88 4.0 2.0 3.0 1.8 108 chr3R 7574620 intron CG34127 - chr3R 7574674 intron CG34127 - chr3R 7574728 intron CG34127 - chr3R_7_7570001 chr3R_7570001 RAL-177 2015 chr3R 7610983 7611034 chr3R 7611188 7611239 17 205 2.5 3.0 2.8 4.5 256 chr3R 7610983 intron CG34127 - chr3R 7611111 intron CG34127 - chr3R 7611239 intron CG34127 - chr3R_17_7610001 chr3R_7610001 RAL-177 2016 chr3R 7617976 7618019 chr3R 7618088 7618131 16 112 3.5 6.5 5.0 2.7 155 chr3R 7617976 intron CG34127 - chr3R 7618054 intron CG34127 - chr3R 7618131 intron CG34127 - chr3R_16_7615001 chr3R_7615001 RAL-177 2017 chr3R 7621526 7621556 chr3R 7621637 7621666 4 110 3.0 3.5 3.2 1.0 140 chr3R 7621526 intron CG34127 - chr3R 7621596 intron CG34127 - chr3R 7621666 intron CG34127 - chr3R_4_7620001 chr3R_7620001 RAL-177 2018 chr3R 7654983 7655038 chr3R 7655085 7655131 13 101 3.0 3.5 3.2 3.1 148 chr3R 7654983 intergenic not near genes chr3R 7655057 intergenic not near genes chr3R 7655131 intergenic not near genes chr3R_13_7655001 chr3R_7655001 RAL-177 2019 chr3R 7694561 7694608 chr3R 7713642 7713688 invader3 16 19080 3.5 3.0 3.2 3.8 19127 chr3R 7694561 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713688 intergenic not near genes chr3R_16_7700001 chr3R_7700001 RAL-177 2020 chr3R 7729447 7729485 chr3R 7737405 7737441 Stalker2 21 7955 8.0 5.0 6.5 2.8 7994 chr3R 7729447 intergenic not near genes chr3R 7733444 intergenic not near genes chr3R 7737441 intergenic not near genes chr3R_21_7730001 chr3R_7730001 RAL-177 2021 chr3R 7755306 7755341 chr3R 7755411 7755433 5 100 5.0 3.0 4.0 1.0 127 chr3R 7755306 intergenic not near genes chr3R 7755370 intergenic not near genes chr3R 7755433 intergenic not near genes chr3R_5_7755001 chr3R_7755001 RAL-177 2022 chr3R 7760236 7760282 chr3R 7760765 7760811 15 529 5.0 3.5 4.2 2.9 575 chr3R 7760236 intron Sp7 + chr3R 7760524 intron Sp7 + chr3R 7760811 5` UTR Sp7 + chr3R_15_7760001 chr3R_7760001 RAL-177 2023 chr3R 7837377 7837407 chr3R 7837490 7837520 6 110 5.0 2.0 3.5 1.3 143 chr3R 7837377 intron CG34384 + chr3R 7837448 intron CG34384 + chr3R 7837520 intron CG34384 + chr3R_6_7835001 chr3R_7835001 RAL-177 2024 chr3R 7973300 7973341 chr3R 7974382 7974423 1360 16 1082 5.5 4.5 5.0 2.7 1123 chr3R 7973300 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974423 3` UTR CD98hc - chr3R_16_7970001 chr3R_7970001 RAL-177 2025 chr3R 7987164 7987212 chr3R 7987273 7987286 10 105 5.0 8.5 6.8 1.3 122 chr3R 7987164 intron CG2781 - chr3R 7987225 intron CG2781 - chr3R 7987286 intron CG2781 - chr3R_10_7985001 chr3R_7985001 RAL-177 2026 chr3R 8049029 8049064 chr3R 8049623 8049658 7 593 6.0 2.0 4.0 1.4 629 chr3R 8049029 intron CG43060 + chr3R 8049344 intron,intron CG43060 +,CG43618 + chr3R 8049658 intron CG43060 + chr3R_7_8045001 chr3R_8045001 RAL-177 2027 chr3R 8094390 8094414 chr3R 8099715 8099739 Transpac 10 5325 6.0 8.5 7.2 1.2 5349 chr3R 8094390 intron CG7900 + chr3R 8097064 intron CG7900 + chr3R 8099739 intron CG7900 + chr3R_10_8095001 chr3R_8095001 RAL-177 2028 chr3R 8101752 8101784 chr3R 8104856 8104888 G2 9 3102 2.5 9.5 6.0 1.3 3136 chr3R 8101752 exon CG7900 + chr3R 8103320 intron CG7900 + chr3R 8104888 3` UTR CG7900 + chr3R_9_8100001 chr3R_8100001 RAL-177 2029 chr3R 8107367 8107417 chr3R 8107521 8107571 19 153 2.5 5.0 3.8 4.0 204 chr3R 8107367 intron puc + chr3R 8107469 intron puc + chr3R 8107571 intron puc + chr3R_19_8105001 chr3R_8105001 RAL-177 2030 chr3R 8207545 8207584 chr3R 8208398 8208423 F-element 4 853 1.5 3.0 2.2 1.2 878 chr3R 8207545 intergenic not near genes chr3R 8207984 intergenic not near genes chr3R 8208423 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-177 2031 chr3R 8339246 8339247 chr3R 21907534 21907536 7 13568289 29.5 12.5 21.0 0.3 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-177 2032 chr3R 8374154 8374167 chr3R 8374283 8374289 4 129 5.0 2.5 3.8 0.8 135 chr3R 8374154 intron CG45263 - chr3R 8374222 intron CG45263 - chr3R 8374289 intron CG45263 - chr3R_4_8370001 chr3R_8370001 RAL-177 2033 chr3R 8402995 8403040 chr3R 8412171 8412198 roo 15 9180 3.5 5.0 4.2 2.9 9203 chr3R 8402995 intron CG45263 - chr3R 8407596 intron CG45263 - chr3R 8412198 intron CG45263 - chr3R_15_8405001 chr3R_8405001 RAL-177 2034 chr3R 8478072 8478109 chr3R 8478172 8478209 16 99 3.5 5.0 4.2 3.1 137 chr3R 8478072 intergenic CG45263 - chr3R 8478140 intergenic not near genes chr3R 8478209 intergenic not near genes chr3R_16_8475001 chr3R_8475001 RAL-177 2035 chr3R 8570464 8570510 chr3R 8575114 8575156 HMS-Beagle 15 4648 2.0 3.5 2.8 3.9 4692 chr3R 8570464 intergenic not near genes chr3R 8572810 intergenic not near genes chr3R 8575156 intergenic not near genes chr3R_15_8570001 chr3R_8570001 RAL-177 2036 chr3R 8601781 8601799 chr3R 8610919 8610972 roo 4 9156 3.0 3.5 3.2 1.0 9191 chr3R 8601781 intron 5-HT2B + chr3R 8606376 intron 5-HT2B + chr3R 8610972 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-177 2037 chr3R 8642431 8642444 chr3R 8642492 8642526 6 78 1.0 2.5 1.8 2.1 95 chr3R 8642431 intergenic not near genes chr3R 8642478 intergenic not near genes chr3R 8642526 intergenic not near genes chr3R_6_8640001 chr3R_8640001 RAL-177 2038 chr3R 8707343 8707384 chr3R 8709804 8709824 jockey 12 2458 6.0 3.5 4.8 2.1 2481 chr3R 8707343 intergenic not near genes chr3R 8708584 intergenic not near genes chr3R 8709824 intergenic not near genes chr3R_12_8705001 chr3R_8705001 RAL-177 2039 chr3R 8917813 8917912 chr3R 8917910 8918012 16 114 0.0 0.0 0.0 16.0 199 chr3R 8917813 intron pyd - chr3R 8917912 intron pyd - chr3R 8918012 intron pyd - chr3R_16_8915001 chr3R_8915001 RAL-177 2040 chr3R 9082034 9082065 chr3R 9082137 9082179 5 109 1.0 1.0 1.0 2.5 145 chr3R 9082034 intron pum - chr3R 9082106 intron pum - chr3R 9082179 intron pum - chr3R_5_9080001 chr3R_9080001 RAL-177 2041 chr3R 9095673 9095713 chr3R 9096013 9096049 12 339 5.5 5.5 5.5 1.8 376 chr3R 9095673 intron pum - chr3R 9095861 intron pum - chr3R 9096049 intron pum - chr3R_12_9095001 chr3R_9095001 RAL-177 2042 chr3R 9108844 9108884 chr3R 9108940 9108980 13 96 6.0 3.5 4.8 2.2 136 chr3R 9108844 intron pum - chr3R 9108912 intron pum - chr3R 9108980 intron pum - chr3R_13_9105001 chr3R_9105001 RAL-177 2043 chr3R 9141138 9141191 chr3R 9141247 9141295 13 107 3.0 4.5 3.8 2.7 157 chr3R 9141138 intron pum - chr3R 9141216 intron pum - chr3R 9141295 intron pum - chr3R_13_9140001 chr3R_9140001 RAL-177 2044 chr3R 9211186 9211214 chr3R 9211425 9211453 15 238 2.5 4.5 3.5 3.3 267 chr3R 9211186 intron pum - chr3R 9211320 intron pum - chr3R 9211453 intron pum - chr3R_15_9210001 chr3R_9210001 RAL-177 2045 chr3R 9599812 9599840 chr3R 9599993 9600034 9 185 3.5 4.0 3.8 1.9 222 chr3R 9599812 intron CG8312 + chr3R 9599923 intron CG8312 + chr3R 9600034 intron CG8312 + chr3R_9_9595001 chr3R_9595001 RAL-177 2046 chr3R 9611857 9611889 chr3R 9611959 9611991 11 102 7.5 0.5 4.0 2.2 134 chr3R 9611857 intron CG8312 + chr3R 9611924 intron CG8312 + chr3R 9611991 intron CG8312 + chr3R_11_9610001 chr3R_9610001 RAL-177 2047 chr3R 9864332 9864374 chr3R 9864478 9864502 16 140 3.0 6.5 4.8 2.8 170 chr3R 9864332 intron Teh1 - chr3R 9864417 intron Teh1 - chr3R 9864502 intron Teh1 - chr3R_16_9860001 chr3R_9860001 RAL-177 2048 chr3R 9878000 9878022 chr3R 9878108 9878130 6 106 2.0 5.5 3.8 1.2 130 chr3R 9878000 intron,intron Glut4EF +,CR45029 - chr3R 9878065 intron,intron Glut4EF +,CR45029 - chr3R 9878130 intron,intron Glut4EF +,CR45029 - chr3R_6_9875001 chr3R_9875001 RAL-177 2049 chr3R 9879616 9879670 chr3R 9879760 9879784 8 136 3.5 2.5 3.0 2.0 168 chr3R 9879616 intron Glut4EF + chr3R 9879700 intron Glut4EF + chr3R 9879784 intron Glut4EF + chr3R_8_9875001 chr3R_9875001 RAL-177 2050 chr3R 10039908 10039937 chr3R 10040005 10040039 6 100 5.0 5.5 5.2 1.0 131 chr3R 10039908 intron Mical - chr3R 10039974 intron Mical - chr3R 10040039 intron Mical - chr3R_6_10035001 chr3R_10035001 RAL-177 2051 chr3R 10062226 10062275 chr3R 10062369 10062418 15 143 5.0 8.5 6.8 1.9 192 chr3R 10062226 intergenic CR45205 -,CG33630 + chr3R 10062322 intergenic CG33630 +,CR45205 - chr3R 10062418 intergenic CG33630 +,CR45205 - chr3R_15_10060001 chr3R_10060001 RAL-177 2052 chr3R 10231773 10231814 chr3R 10237370 10237411 mdg3 13 5594 2.5 1.0 1.8 4.6 5638 chr3R 10231773 intron CG42795 + chr3R 10234592 intron CG42795 + chr3R 10237411 intron CG42795 + chr3R_13_10230001 chr3R_10230001 RAL-177 2053 chr3R 10255362 10255386 chr3R 10260822 10260846 I-element 12 5460 16.0 6.0 11.0 1.0 5484 chr3R 10255362 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260846 exon Sirt6 - chr3R_12_10255001 chr3R_10255001 RAL-177 2054 chr3R 10286682 10286715 chr3R 10286831 10286873 11 158 2.5 3.0 2.8 2.9 191 chr3R 10286682 intron CG43143 + chr3R 10286778 intron CG43143 + chr3R 10286873 intron CG43143 + chr3R_11_10285001 chr3R_10285001 RAL-177 2055 chr3R 10403042 10403055 chr3R 10403115 10403155 4 94 6.5 1.5 4.0 0.8 113 chr3R 10403042 3` UTR CG6325 - chr3R 10403098 3` UTR CG6325 - chr3R 10403155 3` UTR CG6325 - chr3R_4_10400001 chr3R_10400001 RAL-177 2056 chr3R 10417460 10417507 chr3R 10417814 10417862 13 355 5.0 2.0 3.5 2.9 402 chr3R 10417460 intergenic not near genes chr3R 10417661 intergenic not near genes chr3R 10417862 intergenic not near genes chr3R_13_10415001 chr3R_10415001 RAL-177 2057 chr3R 10512349 10512379 chr3R 10512470 10512506 6 126 5.0 3.5 4.2 1.2 157 chr3R 10512349 intron hth - chr3R 10512428 intron hth - chr3R 10512506 intron hth - chr3R_6_10510001 chr3R_10510001 RAL-177 2058 chr3R 10563120 10563155 chr3R 10563214 10563255 18 96 5.0 3.0 4.0 3.6 135 chr3R 10563120 intron hth - chr3R 10563188 intron hth - chr3R 10563255 intron hth - chr3R_18_10560001 chr3R_10560001 RAL-177 2059 chr3R 10619211 10619257 chr3R 10619314 10619360 15 102 3.5 6.0 4.8 2.6 149 chr3R 10619211 intergenic not near genes chr3R 10619286 intergenic not near genes chr3R 10619360 intergenic not near genes chr3R_15_10615001 chr3R_10615001 RAL-177 2060 chr3R 10627596 10627628 chr3R 10627728 10627756 8 128 3.0 5.5 4.2 1.5 160 chr3R 10627596 intergenic not near genes chr3R 10627676 intergenic not near genes chr3R 10627756 intergenic not near genes chr3R_8_10625001 chr3R_10625001 RAL-177 2061 chr3R 10683532 10683587 chr3R 10683665 10683679 16 124 8.0 3.0 5.5 2.5 147 chr3R 10683532 intron CR44230 + chr3R 10683606 intron CR44230 + chr3R 10683679 intron CR44230 + chr3R_16_10680001 chr3R_10680001 RAL-177 2062 chr3R 10687317 10687332 chr3R 10687413 10687428 5 96 10.5 7.5 9.0 0.5 111 chr3R 10687317 intron Skeletor + chr3R 10687372 intron Skeletor + chr3R 10687428 intron Skeletor + chr3R_5_10685001 chr3R_10685001 RAL-177 2063 chr3R 10712421 10712466 chr3R 10712521 10712566 11 100 4.0 3.0 3.5 2.4 145 chr3R 10712421 intergenic not near genes chr3R 10712494 intergenic not near genes chr3R 10712566 intergenic not near genes chr3R_11_10710001 chr3R_10710001 RAL-177 2064 chr3R 10804153 10804199 chr3R 10811705 10811751 17.6 19 7552 6.5 4.5 5.5 2.9 7598 chr3R 10804153 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811751 3` UTR CG14693 - chr3R_19_10805001 chr3R_10805001 RAL-177 2065 chr3R 10868570 10868625 chr3R 10868668 10868671 4 74 1.0 0.5 0.8 2.2 101 chr3R 10868570 5` UTR SelR - chr3R 10868620 5` UTR SelR - chr3R 10868671 intergenic SelR -,Tsp86D + chr3R_4_10865001 chr3R_10865001 RAL-177 2066 chr3R 10870847 10870894 chr3R 10870948 10870995 13 101 3.5 5.0 4.2 2.5 148 chr3R 10870847 intergenic Fdh -,Tsp86D + chr3R 10870921 3` UTR Fdh - chr3R 10870995 3` UTR Fdh - chr3R_13_10870001 chr3R_10870001 RAL-177 2067 chr3R 10927345 10927380 chr3R 10927602 10927632 11 260 0.0 1.0 0.5 7.3 287 chr3R 10927345 intergenic not near genes chr3R 10927488 intergenic not near genes chr3R 10927632 intergenic not near genes chr3R_11_10925001 chr3R_10925001 RAL-177 2068 chr3R 10971464 10971512 chr3R 10971575 10971602 14 107 3.5 3.5 3.5 3.1 138 chr3R 10971464 intergenic not near genes chr3R 10971533 intergenic not near genes chr3R 10971602 intergenic not near genes chr3R_14_10970001 chr3R_10970001 RAL-177 2069 chr3R 10987269 10987276 chr3R 10988141 10988147 5 873 3.0 1.5 2.2 1.6 878 chr3R 10987269 intron CG34114 + chr3R 10987708 intron CG34114 + chr3R 10988147 intron CG34114 + chr3R_5_10985001 chr3R_10985001 RAL-177 2070 chr3R 10987281 10987297 chr3R 10988158 10988172 5 875 2.0 2.5 2.2 1.6 891 chr3R 10987281 intron CG34114 + chr3R 10987726 intron CG34114 + chr3R 10988172 intron CG34114 + chr3R_5_10985001 chr3R_10985001 RAL-177 2071 chr3R 11056887 11056903 chr3R 11056985 11057001 5 98 4.0 0.0 2.0 1.7 114 chr3R 11056887 intergenic not near genes chr3R 11056944 intergenic not near genes chr3R 11057001 intergenic not near genes chr3R_5_11055001 chr3R_11055001 RAL-177 2072 chr3R 11065601 11065616 chr3R 11071261 11071276 297 4 5666 4.0 4.0 4.0 0.8 5675 chr3R 11065601 intergenic not near genes chr3R 11068438 intergenic not near genes chr3R 11071276 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-177 2073 chr3R 11151108 11151146 chr3R 11151323 11151361 7 211 3.5 5.0 4.2 1.3 253 chr3R 11151108 3` UTR Ugt86Di - chr3R 11151234 3` UTR Ugt86Di - chr3R 11151361 3` UTR Ugt86Di - chr3R_7_11150001 chr3R_11150001 RAL-177 2074 chr3R 11155023 11155069 chr3R 11155121 11155167 13 98 2.5 3.0 2.8 3.4 144 chr3R 11155023 intron Ugt86Dc + chr3R 11155095 intron Ugt86Dc + chr3R 11155167 intron Ugt86Dc + chr3R_13_11155001 chr3R_11155001 RAL-177 2075 chr3R 11174576 11174610 chr3R 11175310 11175326 6 727 13.0 19.5 16.2 0.3 750 chr3R 11174576 exon Ugt86Dj - chr3R 11174951 intron Ugt86Dj - chr3R 11175326 exon Ugt86Dj - chr3R_6_11170001 chr3R_11170001 RAL-177 2076 chr3R 11197975 11198012 chr3R 11198088 11198128 7 117 1.0 1.0 1.0 3.5 153 chr3R 11197975 intron cu + chr3R 11198052 intron cu + chr3R 11198128 intron cu + chr3R_7_11195001 chr3R_11195001 RAL-177 2077 chr3R 11220267 11220305 chr3R 11220406 11220444 13 136 4.5 10.0 7.2 1.6 177 chr3R 11220267 3` UTR CG6693 - chr3R 11220356 3` UTR CG6693 - chr3R 11220444 3` UTR CG6693 - chr3R_13_11220001 chr3R_11220001 RAL-177 2078 chr3R 11275437 11275484 chr3R 11275545 11275592 15 107 5.0 5.5 5.2 2.4 155 chr3R 11275437 intron CR31386 - chr3R 11275514 intron CR31386 - chr3R 11275592 intron CR31386 - chr3R_15_11275001 chr3R_11275001 RAL-177 2079 chr3R 11302393 11302433 chr3R 11302700 11302740 4 307 22.0 23.5 22.8 0.2 347 chr3R 11302393 intron CR31386 - chr3R 11302566 intron CR31386 - chr3R 11302740 intron CR31386 - chr3R_4_11300001 chr3R_11300001 RAL-177 2080 chr3R 11302236 11302277 chr3R 11303063 11303091 10 815 35.5 24.0 29.8 0.3 855 chr3R 11302236 intron CR31386 - chr3R 11302664 intron CR31386 - chr3R 11303091 intron CR31386 - chr3R_10_11300001 chr3R_11300001 RAL-177 2081 chr3R 11313215 11313261 chr3R 11313324 11313370 11 109 6.5 0.5 3.5 2.4 155 chr3R 11313215 intergenic not near genes chr3R 11313292 intergenic not near genes chr3R 11313370 intergenic not near genes chr3R_11_11310001 chr3R_11310001 RAL-177 2082 chr3R 11342521 11342574 chr3R 11342617 11342670 12 96 4.0 4.0 4.0 2.4 149 chr3R 11342521 intron pros + chr3R 11342596 intron pros + chr3R 11342670 intron pros + chr3R_12_11340001 chr3R_11340001 RAL-177 2083 chr3R 11379220 11379244 chr3R 11388395 11388404 roo 4 9171 7.0 6.5 6.8 0.5 9184 chr3R 11379220 intron pros + chr3R 11383812 intron pros + chr3R 11388404 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-177 2084 chr3R 11476931 11476972 chr3R 11477053 11477094 23 122 3.5 3.5 3.5 5.1 163 chr3R 11476931 intergenic not near genes chr3R 11477012 intergenic not near genes chr3R 11477094 intergenic not near genes chr3R_23_11475001 chr3R_11475001 RAL-177 2085 chr3R 11518797 11518843 chr3R 11518908 11518933 15 109 5.0 4.5 4.8 2.6 136 chr3R 11518797 intergenic not near genes chr3R 11518865 intergenic not near genes chr3R 11518933 intergenic not near genes chr3R_15_11515001 chr3R_11515001 RAL-177 2086 chr3R 11549795 11549812 chr3R 11549893 11549910 8 98 10.0 7.0 8.5 0.8 115 chr3R 11549795 intergenic not near genes chr3R 11549852 intergenic not near genes chr3R 11549910 intergenic not near genes chr3R_8_11545001 chr3R_11545001 RAL-177 2087 chr3R 11664771 11664819 chr3R 11664883 11664919 15 108 1.5 1.5 1.5 6.0 148 chr3R 11664771 intron CG42327 + chr3R 11664845 intron CG42327 + chr3R 11664919 intron CG42327 + chr3R_15_11660001 chr3R_11660001 RAL-177 2088 chr3R 11694704 11694749 chr3R 11694817 11694862 16 112 3.0 8.0 5.5 2.5 158 chr3R 11694704 intergenic Fer3 - chr3R 11694783 intergenic Fer3 - chr3R 11694862 intergenic not near genes chr3R_16_11690001 chr3R_11690001 RAL-177 2089 chr3R 11734142 11734183 chr3R 11734281 11734322 13 135 3.0 4.5 3.8 2.7 180 chr3R 11734142 intergenic not near genes chr3R 11734232 intergenic not near genes chr3R 11734322 intergenic not near genes chr3R_13_11730001 chr3R_11730001 RAL-177 2090 chr3R 11830346 11830359 chr3R 11830450 11830463 7 104 4.0 6.5 5.2 1.1 117 chr3R 11830346 intron CG6959 - chr3R 11830404 intron CG6959 - chr3R 11830463 intron CG6959 - chr3R_7_11830001 chr3R_11830001 RAL-177 2091 chr3R 11830955 11830963 chr3R 11831119 11831127 4 164 5.5 3.5 4.5 0.7 172 chr3R 11830955 intron CG6959 - chr3R 11831041 intron CG6959 - chr3R 11831127 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-177 2092 chr3R 11841066 11841090 chr3R 11846252 11846301 BS 14 5202 4.5 6.5 5.5 2.2 5235 chr3R 11841066 intron CG6959 - chr3R 11843684 intron CG6959 - chr3R 11846301 intron CG6959 - chr3R_14_11840001 chr3R_11840001 RAL-177 2093 chr3R 11853428 11853473 chr3R 11853597 11853632 12 164 0.0 3.5 1.8 4.3 204 chr3R 11853428 intron CG6959 - chr3R 11853530 intron CG6959 - chr3R 11853632 intron CG6959 - chr3R_12_11850001 chr3R_11850001 RAL-177 2094 chr3R 11853747 11853793 chr3R 11853872 11853918 17 123 3.5 6.5 5.0 2.8 171 chr3R 11853747 intron CG6959 - chr3R 11853832 intron CG6959 - chr3R 11853918 intron CG6959 - chr3R_17_11850001 chr3R_11850001 RAL-177 2095 chr3R 11909348 11909388 chr3R 11909448 11909461 8 95 4.5 3.5 4.0 1.6 113 chr3R 11909348 intron Cad87A - chr3R 11909404 intron Cad87A - chr3R 11909461 intron Cad87A - chr3R_8_11905001 chr3R_11905001 RAL-177 2096 chr3R 11919288 11919335 chr3R 11919396 11919443 12 100 3.5 5.5 4.5 2.2 155 chr3R 11919288 intron Cad87A - chr3R 11919366 intron Cad87A - chr3R 11919443 intron Cad87A - chr3R_12_11915001 chr3R_11915001 RAL-177 2097 chr3R 11945365 11945405 chr3R 11945483 11945523 19 113 1.5 7.0 4.2 3.7 158 chr3R 11945365 intron Cad87A - chr3R 11945444 intron Cad87A - chr3R 11945523 intron Cad87A - chr3R_19_11945001 chr3R_11945001 RAL-177 2098 chr3R 11957833 11957864 chr3R 11958136 11958166 S-element 14 303 6.5 0.0 3.2 3.3 333 chr3R 11957833 intergenic not near genes chr3R 11958000 intergenic not near genes chr3R 11958166 intergenic not near genes chr3R_14_11955001 chr3R_11955001 RAL-177 2099 chr3R 11994975 11995026 chr3R 11995075 11995114 7 96 4.0 3.0 3.5 1.6 139 chr3R 11994975 exon Tk - chr3R 11995044 exon Tk - chr3R 11995114 exon Tk - chr3R_7_11995001 chr3R_11995001 RAL-177 2100 chr3R 12022863 12022912 chr3R 12025060 12025083 pogo 19 2195 3.5 6.0 4.8 3.3 2220 chr3R 12022863 intergenic not near genes chr3R 12023973 intergenic not near genes chr3R 12025083 intergenic not near genes chr3R_19_12020001 chr3R_12020001 RAL-177 2101 chr3R 12188476 12188508 chr3R 12188575 12188607 5 99 3.5 6.5 5.0 0.8 131 chr3R 12188476 intergenic not near genes chr3R 12188542 intergenic not near genes chr3R 12188607 intergenic not near genes chr3R_5_12185001 chr3R_12185001 RAL-177 2102 chr3R 12214346 12214354 chr3R 12214440 12214460 5 102 8.5 6.5 7.5 0.6 114 chr3R 12214346 3` UTR CG4848 - chr3R 12214403 3` UTR CG4848 - chr3R 12214460 3` UTR CG4848 - chr3R_5_12210001 chr3R_12210001 RAL-177 2103 chr3R 12214361 12214369 chr3R 12214432 12214480 6 100 5.5 5.5 5.5 0.9 119 chr3R 12214361 3` UTR CG4848 - chr3R 12214420 3` UTR CG4848 - chr3R 12214480 3` UTR CG4848 - chr3R_6_12210001 chr3R_12210001 RAL-177 2104 chr3R 12440210 12440262 chr3R 12440307 12440359 16 96 5.0 10.0 7.5 1.9 149 chr3R 12440210 intron Desat1 + chr3R 12440284 intron Desat1 + chr3R 12440359 intron Desat1 + chr3R_16_12440001 chr3R_12440001 RAL-177 2105 chr3R 12538161 12538208 chr3R 12538260 12538306 15 99 6.0 5.5 5.8 2.2 145 chr3R 12538161 intron Octbeta3R - chr3R 12538234 intron Octbeta3R - chr3R 12538306 intron Octbeta3R - chr3R_15_12535001 chr3R_12535001 RAL-177 2106 chr3R 12722714 12722760 chr3R 12722825 12722871 19 109 2.5 1.5 2.0 6.3 157 chr3R 12722714 intergenic Men - chr3R 12722792 intergenic Men - chr3R 12722871 intergenic Men - chr3R_19_12720001 chr3R_12720001 RAL-177 2107 chr3R 12723194 12723208 chr3R 12723305 12723319 5 111 5.5 10.0 7.8 0.6 125 chr3R 12723194 intergenic not near genes chr3R 12723256 intergenic not near genes chr3R 12723319 intergenic not near genes chr3R_5_12720001 chr3R_12720001 RAL-177 2108 chr3R 12723212 12723233 chr3R 12723293 12723344 5 99 2.0 5.5 3.8 1.0 132 chr3R 12723212 intergenic not near genes chr3R 12723278 intergenic not near genes chr3R 12723344 intergenic not near genes chr3R_5_12720001 chr3R_12720001 RAL-177 2109 chr3R 12763117 12763154 chr3R 12763214 12763251 9 97 0.5 4.5 2.5 2.6 134 chr3R 12763117 intron beat-Vc - chr3R 12763184 intron beat-Vc - chr3R 12763251 intron beat-Vc - chr3R_9_12760001 chr3R_12760001 RAL-177 2110 chr3R 12787929 12787956 chr3R 12788032 12788059 6 103 5.0 3.5 4.2 1.2 130 chr3R 12787929 intergenic not near genes chr3R 12787994 intergenic not near genes chr3R 12788059 intergenic not near genes chr3R_6_12785001 chr3R_12785001 RAL-177 2111 chr3R 12792489 12792498 chr3R 12792596 12792605 6 107 2.0 2.0 2.0 2.0 116 chr3R 12792489 intergenic not near genes chr3R 12792547 intergenic not near genes chr3R 12792605 intergenic not near genes chr3R_6_12790001 chr3R_12790001 RAL-177 2112 chr3R 12816512 12816551 chr3R 12816608 12816647 12 93 3.5 7.5 5.5 1.8 135 chr3R 12816512 intron CG31345 - chr3R 12816580 intron CG31345 - chr3R 12816647 intron CG31345 - chr3R_12_12815001 chr3R_12815001 RAL-177 2113 chr3R 12853120 12853169 chr3R 12853227 12853276 12 103 4.0 1.5 2.8 3.2 156 chr3R 12853120 intergenic not near genes chr3R 12853198 intergenic not near genes chr3R 12853276 intergenic not near genes chr3R_12_12850001 chr3R_12850001 RAL-177 2114 chr3R 12864542 12864593 chr3R 12865047 12865098 roo 33 502 4.0 5.5 4.8 5.7 556 chr3R 12864542 intergenic not near genes chr3R 12864820 intergenic not near genes chr3R 12865098 intergenic not near genes chr3R_33_12860001 chr3R_12860001 RAL-177 2115 chr3R 12866469 12866516 chr3R 12866640 12866687 14 168 0.5 1.5 1.0 7.0 218 chr3R 12866469 intergenic not near genes chr3R 12866578 intergenic not near genes chr3R 12866687 intergenic not near genes chr3R_14_12865001 chr3R_12865001 RAL-177 2116 chr3R 12877635 12877681 chr3R 12877869 12877915 14 231 2.5 3.5 3.0 3.5 280 chr3R 12877635 intergenic not near genes chr3R 12877775 intergenic not near genes chr3R 12877915 intergenic not near genes chr3R_14_12875001 chr3R_12875001 RAL-177 2117 chr3R 12920143 12920186 chr3R 12925366 12925379 copia 8 5208 1.5 4.5 3.0 2.0 5236 chr3R 12920143 intron beat-Vb + chr3R 12922761 intron beat-Vb + chr3R 12925379 intron beat-Vb + chr3R_8_12920001 chr3R_12920001 RAL-177 2118 chr3R 13059941 13059974 chr3R 13060156 13060189 10 215 1.5 6.0 3.8 2.1 248 chr3R 13059941 intron sim + chr3R 13060065 intron sim + chr3R 13060189 intron sim + chr3R_10_13060001 chr3R_13060001 RAL-177 2119 chr3R 13073957 13074004 chr3R 13074056 13074083 22 96 3.5 3.5 3.5 4.9 126 chr3R 13073957 intron sim + chr3R 13074020 intron sim + chr3R 13074083 exon sim + chr3R_22_13070001 chr3R_13070001 RAL-177 2120 chr3R 13075339 13075371 chr3R 13075440 13075472 9 100 6.5 2.5 4.5 1.6 133 chr3R 13075339 intron sim + chr3R 13075406 intron sim + chr3R 13075472 intron sim + chr3R_9_13075001 chr3R_13075001 RAL-177 2121 chr3R 13135810 13135859 chr3R 13138005 13138054 pogo 10 2195 5.0 3.5 4.2 1.9 2244 chr3R 13135810 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136932 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138054 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13135001 chr3R_13135001 RAL-177 2122 chr3R 13143038 13143063 chr3R 13148624 13148629 mdg3 6 5584 1.5 5.0 3.2 1.4 5591 chr3R 13143038 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145834 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148629 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13145001 chr3R_13145001 RAL-177 2123 chr3R 13195932 13195983 chr3R 13196047 13196082 17 111 3.0 4.0 3.5 3.8 150 chr3R 13195932 intergenic not near genes chr3R 13196007 intergenic not near genes chr3R 13196082 intergenic not near genes chr3R_17_13195001 chr3R_13195001 RAL-177 2124 chr3R 13197167 13197203 chr3R 13198461 13198503 10 1299 11.0 26.0 18.5 0.5 1336 chr3R 13197167 intergenic not near genes chr3R 13197835 intergenic not near genes chr3R 13198503 intergenic not near genes chr3R_10_13195001 chr3R_13195001 RAL-177 2125 chr3R 13197027 13197076 chr3R 13198477 13198526 18 1453 8.5 25.5 17.0 1.0 1499 chr3R 13197027 intergenic not near genes chr3R 13197776 intergenic not near genes chr3R 13198526 intergenic not near genes chr3R_18_13195001 chr3R_13195001 RAL-177 2126 chr3R 13314090 13314123 chr3R 13318897 13318931 Doc 14 4808 8.5 4.5 6.5 1.9 4841 chr3R 13314090 intergenic not near genes chr3R 13316510 intergenic not near genes chr3R 13318931 intergenic CG45080 - chr3R_14_13315001 chr3R_13315001 RAL-177 2127 chr3R 13319152 13319186 chr3R 13319355 13319355 8 210 3.5 2.0 2.8 2.1 203 chr3R 13319152 exon CG45080 - chr3R 13319254 5` UTR CG45080 - chr3R 13319355 intergenic CG45080 - chr3R_8_13315001 chr3R_13315001 RAL-177 2128 chr3R 13418646 13418684 chr3R 13418742 13418780 11 96 3.5 6.0 4.8 1.9 134 chr3R 13418646 intergenic not near genes chr3R 13418713 intergenic not near genes chr3R 13418780 intergenic not near genes chr3R_11_13415001 chr3R_13415001 RAL-177 2129 chr3R 13496609 13496662 chr3R 13496708 13496760 11 98 3.5 2.0 2.8 2.9 151 chr3R 13496609 intergenic not near genes chr3R 13496684 intergenic not near genes chr3R 13496760 intergenic not near genes chr3R_11_13495001 chr3R_13495001 RAL-177 2130 chr3R 13505466 13505471 chr3R 13505774 13505779 5 308 6.5 6.5 6.5 0.7 313 chr3R 13505466 intergenic not near genes chr3R 13505622 intergenic not near genes chr3R 13505779 intergenic not near genes chr3R_5_13505001 chr3R_13505001 RAL-177 2131 chr3R 13505474 13505495 chr3R 13505767 13505803 7 303 4.5 6.0 5.2 1.1 329 chr3R 13505474 intergenic not near genes chr3R 13505638 intergenic not near genes chr3R 13505803 intergenic not near genes chr3R_7_13505001 chr3R_13505001 RAL-177 2132 chr3R 13540493 13540517 chr3R 13540567 13540597 9 90 4.5 5.5 5.0 1.5 104 chr3R 13540493 intergenic not near genes chr3R 13540545 intergenic not near genes chr3R 13540597 intergenic not near genes chr3R_9_13540001 chr3R_13540001 RAL-177 2133 chr3R 13555672 13555683 chr3R 13555770 13555781 6 97 7.0 0.0 3.5 1.3 109 chr3R 13555672 intergenic not near genes chr3R 13555726 intergenic not near genes chr3R 13555781 intergenic not near genes chr3R_6_13555001 chr3R_13555001 RAL-177 2134 chr3R 13558945 13558979 chr3R 13559175 13559196 11 229 4.0 6.0 5.0 1.8 251 chr3R 13558945 intergenic not near genes chr3R 13559070 intergenic not near genes chr3R 13559196 intergenic not near genes chr3R_11_13555001 chr3R_13555001 RAL-177 2135 chr3R 13598067 13598103 chr3R 13598165 13598201 12 98 4.0 3.0 3.5 2.7 134 chr3R 13598067 intergenic not near genes chr3R 13598134 intergenic not near genes chr3R 13598201 intergenic not near genes chr3R_12_13595001 chr3R_13595001 RAL-177 2136 chr3R 13603034 13603074 chr3R 13603145 13603185 9 110 3.5 4.0 3.8 1.9 151 chr3R 13603034 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603185 intergenic not near genes chr3R_9_13600001 chr3R_13600001 RAL-177 2137 chr3R 13609560 13609572 chr3R 13609674 13609684 5 114 0.0 1.5 0.8 2.8 124 chr3R 13609560 intergenic CG9759 - chr3R 13609622 intergenic CG9759 - chr3R 13609684 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 RAL-177 2138 chr3R 13659712 13659837 chr3R 13659838 13659933 10 111 0.0 0.0 0.0 10.0 221 chr3R 13659712 intron Hrb87F - chr3R 13659822 intron Hrb87F - chr3R 13659933 intron Hrb87F - chr3R_10_13655001 chr3R_13655001 RAL-177 2139 chr3R 13672919 13672971 chr3R 13673017 13673069 19 97 6.5 4.5 5.5 2.9 150 chr3R 13672919 intron Task6 - chr3R 13672994 intron Task6 - chr3R 13673069 intron Task6 - chr3R_19_13670001 chr3R_13670001 RAL-177 2140 chr3R 13693028 13693028 chr3R 21907534 21907536 27 8214507 16.0 12.5 14.2 1.8 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_27_17800001 chr3R_17800001 RAL-177 2141 chr3R 13714500 13714544 chr3R 13714659 13714703 16 158 0.0 3.0 1.5 6.4 203 chr3R 13714500 intergenic CR34044 - chr3R 13714602 intergenic CR34044 - chr3R 13714703 intergenic CR34044 - chr3R_16_13710001 chr3R_13710001 RAL-177 2142 chr3R 11988075 11988079 chr3R 13731610 13731614 4 1743536 7.5 21.5 14.5 0.3 1743539 chr3R 11988075 intron mfas - chr3R 12859844 intergenic not near genes chr3R 13731614 intron CG34383 + chr3R_4_12855001 chr3R_12855001 RAL-177 2143 chr3R 13828825 13828871 chr3R 13828931 13828977 18 105 6.5 2.5 4.5 3.3 152 chr3R 13828825 intergenic CR43300 + chr3R 13828901 intergenic CR43300 + chr3R 13828977 intergenic not near genes chr3R_18_13825001 chr3R_13825001 RAL-177 2144 chr3R 13852335 13852346 chr3R 13852708 13852719 5 373 0.0 11.5 5.8 0.7 384 chr3R 13852335 intergenic not near genes chr3R 13852527 intergenic not near genes chr3R 13852719 intergenic not near genes chr3R_5_13850001 chr3R_13850001 RAL-177 2145 chr3R 13863660 13863715 chr3R 13863768 13863818 13 104 4.5 2.5 3.5 2.9 158 chr3R 13863660 intergenic not near genes chr3R 13863739 intergenic not near genes chr3R 13863818 intergenic not near genes chr3R_13_13860001 chr3R_13860001 RAL-177 2146 chr3R 13923431 13923470 chr3R 13923528 13923567 10 95 5.0 6.0 5.5 1.5 136 chr3R 13923431 intergenic not near genes chr3R 13923499 intergenic not near genes chr3R 13923567 intergenic not near genes chr3R_10_13920001 chr3R_13920001 RAL-177 2147 chr3R 13941405 13941457 chr3R 13941505 13941557 17 100 2.0 3.5 2.8 4.5 152 chr3R 13941405 intergenic not near genes chr3R 13941481 intergenic not near genes chr3R 13941557 intergenic not near genes chr3R_17_13940001 chr3R_13940001 RAL-177 2148 chr3R 13954275 13954318 chr3R 13954393 13954436 13 118 5.0 0.0 2.5 3.7 161 chr3R 13954275 intergenic not near genes chr3R 13954356 intergenic not near genes chr3R 13954436 intergenic not near genes chr3R_13_13950001 chr3R_13950001 RAL-177 2149 chr3R 13975354 13975404 chr3R 13975454 13975504 13 100 3.0 3.5 3.2 3.1 150 chr3R 13975354 intron rdx - chr3R 13975429 intron rdx - chr3R 13975504 intron rdx - chr3R_13_13975001 chr3R_13975001 RAL-177 2150 chr3R 14021629 14021676 chr3R 14023466 14023513 S-element 10 1837 7.5 3.0 5.2 1.6 1884 chr3R 14021629 intron rdx - chr3R 14022571 intron rdx - chr3R 14023513 intron rdx - chr3R_10_14020001 chr3R_14020001 RAL-177 2151 chr3R 14067125 14067154 chr3R 14067224 14067253 14 99 3.0 4.0 3.5 3.1 128 chr3R 14067125 exon foxo + chr3R 14067189 intron foxo + chr3R 14067253 intron foxo + chr3R_14_14065001 chr3R_14065001 RAL-177 2152 chr3R 14117424 14117469 chr3R 14117520 14117563 20 96 7.5 8.5 8.0 2.2 139 chr3R 14117424 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117563 intron Kif19A - chr3R_20_14115001 chr3R_14115001 RAL-177 2153 chr3R 14174942 14174981 chr3R 14175049 14175088 6 107 4.0 4.0 4.0 1.2 146 chr3R 14174942 3` UTR Dop1R1 - chr3R 14175015 3` UTR Dop1R1 - chr3R 14175088 3` UTR Dop1R1 - chr3R_6_14175001 chr3R_14175001 RAL-177 2154 chr3R 14180791 14180828 chr3R 14185576 14185600 F-element 15 4782 6.0 0.5 3.2 3.6 4809 chr3R 14180791 intron Dop1R1 - chr3R 14183196 intron Dop1R1 - chr3R 14185600 intron Dop1R1 - chr3R_15_14180001 chr3R_14180001 RAL-177 2155 chr3R 14246375 14246414 chr3R 14247891 14247920 jockey 8 1507 2.0 2.5 2.2 2.5 1545 chr3R 14246375 intergenic not near genes chr3R 14247148 intergenic not near genes chr3R 14247920 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-177 2156 chr3R 14248707 14248736 chr3R 14248805 14248833 12 98 1.5 9.5 5.5 1.8 126 chr3R 14248707 intergenic not near genes chr3R 14248770 intergenic not near genes chr3R 14248833 intergenic not near genes chr3R_12_14245001 chr3R_14245001 RAL-177 2157 chr3R 14343282 14343329 chr3R 14343462 14343509 18 180 3.5 4.5 4.0 3.6 227 chr3R 14343282 intron NK7.1 - chr3R 14343396 intron NK7.1 - chr3R 14343509 intron NK7.1 - chr3R_18_14340001 chr3R_14340001 RAL-177 2158 chr3R 14349282 14349334 chr3R 14353007 14353059 15 3727 23.0 42.5 32.8 0.4 3777 chr3R 14349282 intron NK7.1 - chr3R 14351170 intron NK7.1 - chr3R 14353059 intron NK7.1 - chr3R_15_14350001 chr3R_14350001 RAL-177 2159 chr3R 14364045 14364091 chr3R 14364135 14364187 13 92 2.5 2.0 2.2 4.1 142 chr3R 14364045 intron NK7.1 - chr3R 14364116 intron NK7.1 - chr3R 14364187 intron NK7.1 - chr3R_13_14360001 chr3R_14360001 RAL-177 2160 chr3R 14386191 14386234 chr3R 14386295 14386338 8 100 0.0 3.5 1.8 2.9 147 chr3R 14386191 intergenic not near genes chr3R 14386264 intergenic not near genes chr3R 14386338 intergenic not near genes chr3R_8_14385001 chr3R_14385001 RAL-177 2161 chr3R 14455880 14455923 chr3R 14456005 14456038 10 124 5.0 4.5 4.8 1.7 158 chr3R 14455880 intron cv-c - chr3R 14455959 intron cv-c - chr3R 14456038 intron cv-c - chr3R_10_14455001 chr3R_14455001 RAL-177 2162 chr3R 14543577 14543629 chr3R 14543677 14543729 19 97 2.5 5.0 3.8 4.0 152 chr3R 14543577 intron Pde6 - chr3R 14543653 intron Pde6 - chr3R 14543729 intron Pde6 - chr3R_19_14540001 chr3R_14540001 RAL-177 2163 chr3R 14546050 14546071 chr3R 14546147 14546148 7 94 6.0 3.0 4.5 1.3 98 chr3R 14546050 intron Pde6 - chr3R 14546099 intron Pde6 - chr3R 14546148 intron Pde6 - chr3R_7_14545001 chr3R_14545001 RAL-177 2164 chr3R 14608450 14608475 chr3R 14608562 14608567 11 109 2.0 6.0 4.0 2.2 117 chr3R 14608450 intergenic stumps + chr3R 14608508 intergenic stumps + chr3R 14608567 intergenic stumps + chr3R_11_14605001 chr3R_14605001 RAL-177 2165 chr3R 14704363 14704417 chr3R 14704460 14704514 7 94 5.5 4.0 4.8 1.2 151 chr3R 14704363 intron kibra - chr3R 14704438 intron kibra - chr3R 14704514 intron kibra - chr3R_7_14700001 chr3R_14700001 RAL-177 2166 chr3R 14736180 14736227 chr3R 14736304 14736352 9 118 2.0 5.0 3.5 2.0 172 chr3R 14736180 intron eff - chr3R 14736266 intron eff - chr3R 14736352 intron eff - chr3R_9_14735001 chr3R_14735001 RAL-177 2167 chr3R 14847947 14847958 chr3R 14848046 14848057 4 99 1.0 2.5 1.8 1.4 110 chr3R 14847947 intron btsz - chr3R 14848002 intron btsz - chr3R 14848057 intron btsz - chr3R_4_14845001 chr3R_14845001 RAL-177 2168 chr3R 14870076 14870113 chr3R 14870212 14870249 8 133 5.0 2.5 3.8 1.7 173 chr3R 14870076 intron btsz - chr3R 14870162 intron btsz - chr3R 14870249 intron btsz - chr3R_8_14870001 chr3R_14870001 RAL-177 2169 chr3R 14944886 14944896 chr3R 14944981 14944997 5 100 9.0 8.5 8.8 0.5 111 chr3R 14944886 intergenic not near genes chr3R 14944942 intergenic not near genes chr3R 14944997 intergenic not near genes chr3R_5_14940001 chr3R_14940001 RAL-177 2170 chr3R 14954561 14954608 chr3R 14954856 14954893 14 288 5.0 4.5 4.8 2.4 332 chr3R 14954561 intergenic not near genes chr3R 14954727 intergenic not near genes chr3R 14954893 intergenic not near genes chr3R_14_14950001 chr3R_14950001 RAL-177 2171 chr3R 14974276 14974316 chr3R 14974369 14974421 5 103 4.5 0.0 2.2 1.6 145 chr3R 14974276 intergenic not near genes chr3R 14974348 intergenic not near genes chr3R 14974421 intergenic not near genes chr3R_5_14970001 chr3R_14970001 RAL-177 2172 chr3R 14979044 14979097 chr3R 14979143 14979196 18 96 3.5 1.0 2.2 5.6 152 chr3R 14979044 intergenic not near genes chr3R 14979120 intergenic not near genes chr3R 14979196 intergenic not near genes chr3R_18_14975001 chr3R_14975001 RAL-177 2173 chr3R 14980532 14980578 chr3R 14980653 14980684 10 117 1.0 3.0 2.0 3.3 152 chr3R 14980532 intergenic not near genes chr3R 14980608 intergenic not near genes chr3R 14980684 intergenic not near genes chr3R_10_14980001 chr3R_14980001 RAL-177 2174 chr3R 15041406 15041451 chr3R 15045194 15045239 Doc 20 3786 5.0 1.5 3.2 4.8 3833 chr3R 15041406 intergenic not near genes chr3R 15043322 intergenic not near genes chr3R 15045239 intergenic not near genes chr3R_20_15040001 chr3R_15040001 RAL-177 2175 chr3R 15059260 15059478 chr3R 15059474 15059585 BS 17 184 0.0 0.0 0.0 17.0 325 chr3R 15059260 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059585 intron dpr9 - chr3R_17_15055001 chr3R_15055001 RAL-177 2176 chr3R 15061016 15061035 chr3R 15061117 15061136 8 100 4.0 2.5 3.2 1.9 120 chr3R 15061016 intron dpr9 - chr3R 15061076 intron dpr9 - chr3R 15061136 intron dpr9 - chr3R_8_15060001 chr3R_15060001 RAL-177 2177 chr3R 15079791 15079838 chr3R 15080052 15080099 pogo 17 261 3.5 6.5 5.0 2.8 308 chr3R 15079791 3` UTR CG6966 - chr3R 15079945 3` UTR CG6966 - chr3R 15080099 3` UTR CG6966 - chr3R_17_15075001 chr3R_15075001 RAL-177 2178 chr3R 15102478 15102528 chr3R 15109754 15109803 412 24 7274 8.0 7.0 7.5 2.8 7325 chr3R 15102478 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109803 intron CG42788 - chr3R_24_15105001 chr3R_15105001 RAL-177 2179 chr3R 15114905 15114941 chr3R 15115001 15115018 10 91 5.0 6.5 5.8 1.5 113 chr3R 15114905 intron CG42788 - chr3R 15114962 intron CG42788 - chr3R 15115018 intron CG42788 - chr3R_10_15110001 chr3R_15110001 RAL-177 2180 chr3R 15127761 15127810 chr3R 15127861 15127910 13 100 4.0 4.0 4.0 2.6 149 chr3R 15127761 intron CG42788 - chr3R 15127836 intron CG42788 - chr3R 15127910 intron CG42788 - chr3R_13_15125001 chr3R_15125001 RAL-177 2181 chr3R 15132045 15132077 chr3R 15135125 15135155 Juan 13 3078 5.5 10.5 8.0 1.4 3110 chr3R 15132045 intergenic CG42788 - chr3R 15133600 intergenic not near genes chr3R 15135155 3` UTR CG6912 - chr3R_13_15130001 chr3R_15130001 RAL-177 2182 chr3R 15320369 15320419 chr3R 15320632 15320682 23 261 6.0 1.0 3.5 5.1 313 chr3R 15320369 intergenic CG44040 +,CG6276 -,ear + chr3R 15320526 exon CG44040 + chr3R 15320682 3` UTR CG44040 + chr3R_23_15320001 chr3R_15320001 RAL-177 2183 chr3R 15400278 15400300 chr3R 15400512 15400543 11 242 0.0 6.0 3.0 2.8 265 chr3R 15400278 3` UTR Rbp + chr3R 15400410 3` UTR Rbp + chr3R 15400543 3` UTR Rbp + chr3R_11_15400001 chr3R_15400001 RAL-177 2184 chr3R 15445895 15445905 chr3R 15446000 15446003 6 104 3.0 0.0 1.5 2.4 108 chr3R 15445895 exon AdamTS-A - chr3R 15445949 intron AdamTS-A - chr3R 15446003 intron AdamTS-A - chr3R_6_15445001 chr3R_15445001 RAL-177 2185 chr3R 15601156 15601195 chr3R 15608698 15608737 412 16 7542 5.0 8.0 6.5 2.1 7581 chr3R 15601156 intergenic not near genes chr3R 15604946 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_16_15600001 chr3R_15600001 RAL-177 2186 chr3R 15618754 15618763 chr3R 15626229 15626252 blood 4 7488 5.0 8.0 6.5 0.5 7498 chr3R 15618754 intergenic not near genes chr3R 15622503 intergenic not near genes chr3R 15626252 intergenic not near genes chr3R_4_15620001 chr3R_15620001 RAL-177 2187 chr3R 15635203 15635240 chr3R 15635324 15635361 12 121 3.5 5.0 4.2 2.3 158 chr3R 15635203 intergenic CG43335 + chr3R 15635282 intergenic CG43335 + chr3R 15635361 intergenic CG43335 + chr3R_12_15635001 chr3R_15635001 RAL-177 2188 chr3R 15644105 15644136 chr3R 15644194 15644237 7 102 3.5 3.5 3.5 1.6 132 chr3R 15644105 intergenic not near genes chr3R 15644171 intergenic not near genes chr3R 15644237 intergenic not near genes chr3R_7_15640001 chr3R_15640001 RAL-177 2189 chr3R 15711259 15711283 chr3R 15711358 15711370 4 95 5.5 4.5 5.0 0.7 111 chr3R 15711259 intergenic not near genes chr3R 15711314 intergenic not near genes chr3R 15711370 intergenic not near genes chr3R_4_15710001 chr3R_15710001 RAL-177 2190 chr3R 15725367 15725415 chr3R 15725466 15725514 6 90 4.5 4.0 4.2 1.2 147 chr3R 15725367 intergenic not near genes chr3R 15725440 intergenic not near genes chr3R 15725514 intergenic not near genes chr3R_6_15725001 chr3R_15725001 RAL-177 2191 chr3R 15742957 15743001 chr3R 15743200 15743246 9 245 0.5 0.5 0.5 6.0 289 chr3R 15742957 intergenic not near genes chr3R 15743102 intergenic not near genes chr3R 15743246 intergenic not near genes chr3R_9_15740001 chr3R_15740001 RAL-177 2192 chr3R 15790117 15790261 chr3R 15790245 15790399 23 126 18.0 17.5 17.8 1.2 282 chr3R 15790117 exon c(3)G - chr3R 15790258 exon c(3)G - chr3R 15790399 exon c(3)G - chr3R_23_15790001 chr3R_15790001 RAL-177 2193 chr3R 15790281 15790401 chr3R 15790572 15790627 15 251 20.5 23.0 21.8 0.7 346 chr3R 15790281 exon c(3)G - chr3R 15790454 exon c(3)G - chr3R 15790627 exon c(3)G - chr3R_15_15790001 chr3R_15790001 RAL-177 2194 chr3R 15790823 15790860 chr3R 15790956 15790996 10 132 18.0 18.0 18.0 0.5 173 chr3R 15790823 exon c(3)G - chr3R 15790910 intron c(3)G - chr3R 15790996 exon c(3)G - chr3R_10_15790001 chr3R_15790001 RAL-177 2195 chr3R 15790864 15790869 chr3R 15790955 15791005 5 127 18.0 18.0 18.0 0.3 141 chr3R 15790864 exon c(3)G - chr3R 15790934 intron c(3)G - chr3R 15791005 exon c(3)G - chr3R_5_15790001 chr3R_15790001 RAL-177 2196 chr3R 15817235 15817279 chr3R 15818257 15818285 20 1021 6.0 3.0 4.5 3.6 1050 chr3R 15817235 intron alpha-Man-IIb + chr3R 15817760 intron alpha-Man-IIb + chr3R 15818285 intron alpha-Man-IIb + chr3R_20_15815001 chr3R_15815001 RAL-177 2197 chr3R 15878590 15878609 chr3R 15878689 15878709 5 100 11.0 4.0 7.5 0.6 119 chr3R 15878590 intergenic not near genes chr3R 15878650 intergenic not near genes chr3R 15878709 intergenic not near genes chr3R_5_15875001 chr3R_15875001 RAL-177 2198 chr3R 15992609 15992639 chr3R 15993066 15993101 12 462 5.5 5.0 5.2 1.9 492 chr3R 15992609 intron,intron srp +,CR44133 + chr3R 15992855 intron,intron srp +,CR44133 + chr3R 15993101 intron,intron srp +,CR44133 + chr3R_12_15990001 chr3R_15990001 RAL-177 2199 chr3R 15992645 15992654 chr3R 15993065 15993116 8 457 4.0 4.5 4.2 1.5 471 chr3R 15992645 intron,intron srp +,CR44133 + chr3R 15992880 intron,intron srp +,CR44133 + chr3R 15993116 intron,intron srp +,CR44133 + chr3R_8_15990001 chr3R_15990001 RAL-177 2200 chr3R 16011020 16011030 chr3R 16011159 16011169 4 138 12.5 1.5 7.0 0.5 149 chr3R 16011020 intron GATAe + chr3R 16011094 intron GATAe + chr3R 16011169 intron GATAe + chr3R_4_16010001 chr3R_16010001 RAL-177 2201 chr3R 16011032 16011072 chr3R 16011158 16011211 16 134 2.0 1.5 1.8 5.7 179 chr3R 16011032 intron GATAe + chr3R 16011122 intron GATAe + chr3R 16011211 intron GATAe + chr3R_16_16010001 chr3R_16010001 RAL-177 2202 chr3R 16023849 16023891 chr3R 16023946 16023988 11 96 2.5 5.0 3.8 2.3 139 chr3R 16023849 intergenic not near genes chr3R 16023918 intergenic not near genes chr3R 16023988 intergenic not near genes chr3R_11_16020001 chr3R_16020001 RAL-177 2203 chr3R 16033391 16033440 chr3R 16033492 16033541 18 101 5.0 2.5 3.8 3.8 150 chr3R 16033391 intron pnr + chr3R 16033466 intron pnr + chr3R 16033541 intron pnr + chr3R_18_16030001 chr3R_16030001 RAL-177 2204 chr3R 16215085 16215129 chr3R 16215210 16215254 14 125 5.0 8.0 6.5 1.9 169 chr3R 16215085 intergenic CR45641 + chr3R 16215170 intergenic CR45641 + chr3R 16215254 intergenic CR45641 + chr3R_14_16215001 chr3R_16215001 RAL-177 2205 chr3R 16246545 16246557 chr3R 16246621 16246653 7 91 0.0 8.5 4.2 1.3 108 chr3R 16246545 intron tara + chr3R 16246599 intron tara + chr3R 16246653 intron tara + chr3R_7_16245001 chr3R_16245001 RAL-177 2206 chr3R 16260834 16260842 chr3R 16260934 16260942 4 100 0.0 6.5 3.2 1.0 108 chr3R 16260834 intergenic not near genes chr3R 16260888 intergenic bor - chr3R 16260942 intergenic bor - chr3R_4_16260001 chr3R_16260001 RAL-177 2207 chr3R 16275565 16275607 chr3R 16275900 16275942 9 334 1.5 5.0 3.2 2.1 377 chr3R 16275565 intron gish + chr3R 16275754 intron gish + chr3R 16275942 intron gish + chr3R_9_16275001 chr3R_16275001 RAL-177 2208 chr3R 16374280 16374329 chr3R 16374412 16374466 15 136 2.0 5.5 3.8 3.1 186 chr3R 16374280 intergenic ss - chr3R 16374373 intergenic ss - chr3R 16374466 3` UTR ss - chr3R_15_16370001 chr3R_16370001 RAL-177 2209 chr3R 16472568 16472594 chr3R 16472657 16472657 7 88 7.5 12.0 9.8 0.6 89 chr3R 16472568 intergenic Gyc-89Da + chr3R 16472612 5` UTR Gyc-89Da + chr3R 16472657 5` UTR Gyc-89Da + chr3R_7_16470001 chr3R_16470001 RAL-177 2210 chr3R 16519912 16519925 chr3R 16520025 16520038 6 113 7.0 1.0 4.0 1.2 126 chr3R 16519912 intron CG42342 + chr3R 16519975 intron CG42342 + chr3R 16520038 intron CG42342 + chr3R_6_16515001 chr3R_16515001 RAL-177 2211 chr3R 16671506 16671535 chr3R 16671601 16671601 11 93 3.0 10.5 6.8 1.4 95 chr3R 16671506 intron Ubx - chr3R 16671554 intron Ubx - chr3R 16671601 intron Ubx - chr3R_11_16670001 chr3R_16670001 RAL-177 2212 chr3R 16731912 16731945 chr3R 16732010 16732010 4 91 1.0 4.0 2.5 1.1 98 chr3R 16731912 intron Ubx - chr3R 16731961 intron Ubx - chr3R 16732010 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-177 2213 chr3R 16756302 16756349 chr3R 16762513 16762560 diver 8 6211 2.5 1.5 2.0 2.7 6258 chr3R 16756302 intron bxd - chr3R 16759431 intron bxd - chr3R 16762560 intron bxd - chr3R_8_16755001 chr3R_16755001 RAL-177 2214 chr3R 16940985 16941026 chr3R 16941174 16941214 14 189 2.0 4.5 3.2 3.3 229 chr3R 16940985 intron Abd-B - chr3R 16941100 intron Abd-B - chr3R 16941214 intron Abd-B - chr3R_14_16940001 chr3R_16940001 RAL-177 2215 chr3R 17065559 17065598 chr3R 17065853 17065882 13 289 2.5 8.0 5.2 2.1 323 chr3R 17065559 intron Dad + chr3R 17065720 intron Dad + chr3R 17065882 intron Dad + chr3R_13_17065001 chr3R_17065001 RAL-177 2216 chr3R 17120484 17120519 chr3R 17120729 17120764 9 245 4.5 5.0 4.8 1.6 280 chr3R 17120484 intron,exon cher -,CG34278 + chr3R 17120624 intron,exon cher -,CG34278 + chr3R 17120764 intron,3` UTR cher -,CG34278 + chr3R_9_17120001 chr3R_17120001 RAL-177 2217 chr3R 17121501 17121555 chr3R 17121716 17121770 17 214 4.5 2.5 3.5 3.8 269 chr3R 17121501 intron cher - chr3R 17121636 intron,exon cher -,CG42779 + chr3R 17121770 intron,exon cher -,CG42779 + chr3R_17_17120001 chr3R_17120001 RAL-177 2218 chr3R 17184716 17184757 chr3R 17184812 17184853 23 95 3.5 4.5 4.0 4.6 137 chr3R 17184716 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184853 intron Mur89F - chr3R_23_17180001 chr3R_17180001 RAL-177 2219 chr3R 17194390 17194431 chr3R 17194489 17194530 10 97 3.0 6.0 4.5 1.8 140 chr3R 17194390 intron Mur89F - chr3R 17194460 intron Mur89F - chr3R 17194530 intron Mur89F - chr3R_10_17190001 chr3R_17190001 RAL-177 2220 chr3R 17209685 17209699 chr3R 17209793 17209807 4 108 11.5 9.5 10.5 0.3 122 chr3R 17209685 intergenic not near genes chr3R 17209746 intergenic not near genes chr3R 17209807 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-177 2221 chr3R 17335144 17335176 chr3R 17335234 17335267 5 94 3.0 3.0 3.0 1.2 123 chr3R 17335144 intron beat-IIa - chr3R 17335206 intron beat-IIa - chr3R 17335267 intron beat-IIa - chr3R_5_17335001 chr3R_17335001 RAL-177 2222 chr3R 17346672 17346700 chr3R 17348255 17348283 F-element 10 1583 9.0 4.5 6.8 1.3 1611 chr3R 17346672 intron beat-IIa - chr3R 17347478 intron beat-IIa - chr3R 17348283 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-177 2223 chr3R 17355477 17355493 chr3R 17355575 17355584 4 96 9.0 8.0 8.5 0.4 107 chr3R 17355477 intron beat-IIa - chr3R 17355530 intron beat-IIa - chr3R 17355584 intron beat-IIa - chr3R_4_17355001 chr3R_17355001 RAL-177 2224 chr3R 17355496 17355514 chr3R 17355571 17355600 5 84 6.5 6.5 6.5 0.7 104 chr3R 17355496 intron beat-IIa - chr3R 17355548 intron beat-IIa - chr3R 17355600 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-177 2225 chr3R 17358315 17358325 chr3R 17358517 17358527 5 202 4.5 6.5 5.5 0.8 212 chr3R 17358315 intron beat-IIa - chr3R 17358421 intron beat-IIa - chr3R 17358527 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-177 2226 chr3R 17358329 17358341 chr3R 17358514 17358531 5 189 2.0 6.5 4.2 1.0 202 chr3R 17358329 intron beat-IIa - chr3R 17358430 intron beat-IIa - chr3R 17358531 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-177 2227 chr3R 17360141 17360178 chr3R 17360243 17360279 10 102 1.5 4.0 2.8 2.6 138 chr3R 17360141 intron beat-IIa - chr3R 17360210 intron beat-IIa - chr3R 17360279 intron beat-IIa - chr3R_10_17360001 chr3R_17360001 RAL-177 2228 chr3R 17406984 17407022 chr3R 17407106 17407144 12 122 8.0 2.0 5.0 2.0 160 chr3R 17406984 intron CG42798 + chr3R 17407064 5` UTR CG42798 + chr3R 17407144 exon CG42798 + chr3R_12_17405001 chr3R_17405001 RAL-177 2229 chr3R 17461180 17461225 chr3R 17461282 17461307 16 99 4.5 1.5 3.0 4.0 127 chr3R 17461180 intergenic not near genes chr3R 17461244 intergenic not near genes chr3R 17461307 intergenic not near genes chr3R_16_17460001 chr3R_17460001 RAL-177 2230 chr3R 17521574 17521585 chr3R 17521719 17521764 10 161 3.0 5.5 4.2 1.9 190 chr3R 17521574 intergenic not near genes chr3R 17521669 intergenic not near genes chr3R 17521764 intergenic not near genes chr3R_10_17520001 chr3R_17520001 RAL-177 2231 chr3R 17522196 17522207 chr3R 17522309 17522320 5 112 12.0 0.0 6.0 0.7 124 chr3R 17522196 intergenic not near genes chr3R 17522258 intergenic not near genes chr3R 17522320 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-177 2232 chr3R 17638298 17638346 chr3R 17638804 17638852 roo 25 506 5.0 5.0 5.0 4.2 554 chr3R 17638298 intron CG43175 + chr3R 17638575 intron CG43175 + chr3R 17638852 intron,intron CG43175 +,CR45222 + chr3R_25_17635001 chr3R_17635001 RAL-177 2233 chr3R 17647224 17647274 chr3R 17647341 17647391 10 117 3.0 2.0 2.5 2.9 167 chr3R 17647224 intergenic CG14322 + chr3R 17647308 intergenic CG14322 + chr3R 17647391 intergenic CG14322 + chr3R_10_17645001 chr3R_17645001 RAL-177 2234 chr3R 17743196 17743242 chr3R 17743297 17743327 13 99 1.5 4.5 3.0 3.2 131 chr3R 17743196 intron TyrRII + chr3R 17743262 intron TyrRII + chr3R 17743327 intron TyrRII + chr3R_13_17740001 chr3R_17740001 RAL-177 2235 chr3R 17773374 17773389 chr3R 17773474 17773489 6 100 2.0 5.0 3.5 1.3 115 chr3R 17773374 intron CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773489 exon CG43102 - chr3R_6_17770001 chr3R_17770001 RAL-177 2236 chr3R 17820262 17820289 chr3R 17820361 17820365 8 96 7.5 1.0 4.2 1.5 103 chr3R 17820262 intron tinc + chr3R 17820314 intron tinc + chr3R 17820365 intron tinc + chr3R_8_17820001 chr3R_17820001 RAL-177 2237 chr3R 17823179 17823221 chr3R 17823276 17823318 8 97 3.5 3.0 3.2 1.9 139 chr3R 17823179 intron tinc + chr3R 17823248 intron tinc + chr3R 17823318 intron tinc + chr3R_8_17820001 chr3R_17820001 RAL-177 2238 chr3R 17895324 17895376 chr3R 17895433 17895481 13 110 3.0 1.0 2.0 4.3 157 chr3R 17895324 intron Rim - chr3R 17895402 intron Rim - chr3R 17895481 intron Rim - chr3R_13_17895001 chr3R_17895001 RAL-177 2239 chr3R 17899071 17899089 chr3R 17899169 17899187 4 98 11.5 5.5 8.5 0.4 116 chr3R 17899071 intron Rim - chr3R 17899129 intron Rim - chr3R 17899187 intron Rim - chr3R_4_17895001 chr3R_17895001 RAL-177 2240 chr3R 17919567 17919601 chr3R 17919666 17919674 10 91 5.0 4.0 4.5 1.8 107 chr3R 17919567 intergenic cpo + chr3R 17919620 intergenic cpo + chr3R 17919674 intergenic cpo + chr3R_10_17915001 chr3R_17915001 RAL-177 2241 chr3R 17925850 17925881 chr3R 17927324 17927368 hobo 15 1483 4.5 5.5 5.0 2.5 1518 chr3R 17925850 intron cpo + chr3R 17926609 intron cpo + chr3R 17927368 intron cpo + chr3R_15_17925001 chr3R_17925001 RAL-177 2242 chr3R 18030457 18030480 chr3R 18030561 18030584 9 103 7.5 9.0 8.2 1.0 127 chr3R 18030457 intergenic not near genes chr3R 18030520 intergenic not near genes chr3R 18030584 intergenic not near genes chr3R_9_18030001 chr3R_18030001 RAL-177 2243 chr3R 18041741 18041759 chr3R 18041836 18041856 8 97 3.5 0.0 1.8 2.9 115 chr3R 18041741 intergenic not near genes chr3R 18041798 intergenic not near genes chr3R 18041856 intergenic not near genes chr3R_8_18040001 chr3R_18040001 RAL-177 2244 chr3R 18061426 18061460 chr3R 18061537 18061572 8 111 3.0 0.0 1.5 3.2 146 chr3R 18061426 intergenic not near genes chr3R 18061499 intergenic not near genes chr3R 18061572 intergenic not near genes chr3R_8_18060001 chr3R_18060001 RAL-177 2245 chr3R 18061552 18061616 chr3R 18063146 18063204 F-element 6 1592 0.0 0.0 0.0 6.0 1652 chr3R 18061552 intergenic not near genes chr3R 18062378 intergenic not near genes chr3R 18063204 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-177 2246 chr3R 18126194 18126228 chr3R 18126293 18126327 8 99 3.5 3.0 3.2 1.9 133 chr3R 18126194 intron sr + chr3R 18126260 intron sr + chr3R 18126327 intron sr + chr3R_8_18125001 chr3R_18125001 RAL-177 2247 chr3R 18143540 18143590 chr3R 18143649 18143699 16 108 5.5 5.5 5.5 2.5 159 chr3R 18143540 intergenic not near genes chr3R 18143620 intergenic not near genes chr3R 18143699 intergenic not near genes chr3R_16_18140001 chr3R_18140001 RAL-177 2248 chr3R 18157609 18157620 chr3R 18157737 18157748 5 128 0.0 11.0 5.5 0.8 139 chr3R 18157609 intergenic CR45103 + chr3R 18157678 intergenic CR45103 + chr3R 18157748 5` UTR CR45103 + chr3R_5_18155001 chr3R_18155001 RAL-177 2249 chr3R 18215753 18215768 chr3R 18215942 18215957 7 188 0.0 3.5 1.8 2.5 204 chr3R 18215753 intergenic CG14314 + chr3R 18215855 intergenic CG14314 + chr3R 18215957 intergenic CG14314 + chr3R_7_18215001 chr3R_18215001 RAL-177 2250 chr3R 18232792 18232810 chr3R 18232891 18232909 8 100 2.0 2.5 2.2 2.5 117 chr3R 18232792 intergenic not near genes chr3R 18232850 intergenic not near genes chr3R 18232909 intergenic not near genes chr3R_8_18230001 chr3R_18230001 RAL-177 2251 chr3R 18237548 18237600 chr3R 18237659 18237690 28 106 2.0 3.5 2.8 7.4 142 chr3R 18237548 intron repo + chr3R 18237619 intron repo + chr3R 18237690 intron repo + chr3R_28_18235001 chr3R_18235001 RAL-177 2252 chr3R 18299269 18299291 chr3R 18302617 18302664 12 3351 18.0 27.5 22.8 0.5 3395 chr3R 18299269 5` UTR Dlc90F + chr3R 18300966 exon CG18600 - chr3R 18302664 exon CG7126 - chr3R_12_18300001 chr3R_18300001 RAL-177 2253 chr3R 18331764 18331770 chr3R 18333278 18333283 hopper2 4 1514 9.5 2.5 6.0 0.6 1519 chr3R 18331764 3` UTR CG15803 - chr3R 18332524 intron CG15803 - chr3R 18333283 3` UTR CG15803 - chr3R_4_18330001 chr3R_18330001 RAL-177 2254 chr3R 18341991 18342045 chr3R 18342089 18342143 10 95 4.5 3.0 3.8 2.1 152 chr3R 18341991 intron CG15803 - chr3R 18342067 intron CG15803 - chr3R 18342143 intron CG15803 - chr3R_10_18340001 chr3R_18340001 RAL-177 2255 chr3R 18352563 18352608 chr3R 18352676 18352721 16 113 4.5 4.0 4.2 3.1 158 chr3R 18352563 intron CG15803 - chr3R 18352642 intron CG15803 - chr3R 18352721 intron CG15803 - chr3R_16_18350001 chr3R_18350001 RAL-177 2256 chr3R 18379617 18379657 chr3R 18379943 18379983 12 324 5.0 7.0 6.0 1.7 366 chr3R 18379617 intron CG7675 - chr3R 18379800 intron CG7675 - chr3R 18379983 intron CG7675 - chr3R_12_18375001 chr3R_18375001 RAL-177 2257 chr3R 18394456 18394462 chr3R 18394553 18394559 4 97 12.5 6.0 9.2 0.4 103 chr3R 18394456 intron Vha100-2 - chr3R 18394508 intron Vha100-2 - chr3R 18394559 intron Vha100-2 - chr3R_4_18390001 chr3R_18390001 RAL-177 2258 chr3R 18394463 18394503 chr3R 18394551 18394569 12 92 2.5 6.0 4.2 2.3 106 chr3R 18394463 intron Vha100-2 - chr3R 18394516 intron Vha100-2 - chr3R 18394569 intron Vha100-2 - chr3R_12_18390001 chr3R_18390001 RAL-177 2259 chr3R 18418272 18418294 chr3R 18418398 18418433 4 134 5.0 4.0 4.5 0.7 161 chr3R 18418272 intron fru - chr3R 18418352 intron fru - chr3R 18418433 intron fru - chr3R_4_18415001 chr3R_18415001 RAL-177 2260 chr3R 18472263 18472292 chr3R 18472384 18472413 8 121 5.5 2.0 3.8 1.7 150 chr3R 18472263 intron fru - chr3R 18472338 intron fru - chr3R 18472413 intron fru - chr3R_8_18470001 chr3R_18470001 RAL-177 2261 chr3R 18473226 18473249 chr3R 18473333 18473356 5 107 0.5 8.0 4.2 1.0 130 chr3R 18473226 intron fru - chr3R 18473291 intron fru - chr3R 18473356 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-177 2262 chr3R 18501591 18501625 chr3R 18501692 18501726 8 101 7.0 10.5 8.8 0.8 135 chr3R 18501591 intron fru - chr3R 18501658 intron fru - chr3R 18501726 intron fru - chr3R_8_18500001 chr3R_18500001 RAL-177 2263 chr3R 18606500 18606530 chr3R 18610742 18610772 F-element 12 4242 5.0 4.5 4.8 2.1 4272 chr3R 18606500 intron,intron qin +,CG14304 - chr3R 18608636 intron,intron qin +,CG14304 - chr3R 18610772 intron,intron qin +,CG14304 - chr3R_12_18605001 chr3R_18605001 RAL-177 2264 chr3R 18615355 18615403 chr3R 18615467 18615515 11 111 2.0 2.5 2.2 3.4 160 chr3R 18615355 intron,intron qin +,CG14304 - chr3R 18615435 intron,intron qin +,CG14304 - chr3R 18615515 intron,intron qin +,CG14304 - chr3R_11_18615001 chr3R_18615001 RAL-177 2265 chr3R 18669858 18669894 chr3R 18669998 18670034 13 138 3.5 6.5 5.0 2.2 176 chr3R 18669858 intron CG7702 + chr3R 18669946 intron CG7702 + chr3R 18670034 intron CG7702 + chr3R_13_18665001 chr3R_18665001 RAL-177 2266 chr3R 18695742 18695752 chr3R 18695846 18695856 6 104 10.5 0.0 5.2 1.0 114 chr3R 18695742 3` UTR CG34282 + chr3R 18695799 intergenic CG34282 + chr3R 18695856 intergenic CG34282 + chr3R_6_18695001 chr3R_18695001 RAL-177 2267 chr3R 18730007 18730038 chr3R 18730100 18730124 11 89 4.0 2.5 3.2 2.6 117 chr3R 18730007 exon Cha + chr3R 18730066 intron Cha + chr3R 18730124 exon Cha + chr3R_11_18730001 chr3R_18730001 RAL-177 2268 chr3R 18781699 18781723 chr3R 18781775 18781819 8 88 3.5 1.5 2.5 2.3 120 chr3R 18781699 intron CG7720 - chr3R 18781759 intron CG7720 - chr3R 18781819 intron CG7720 - chr3R_8_18780001 chr3R_18780001 RAL-177 2269 chr3R 18785851 18785870 chr3R 18785948 18785964 8 95 9.0 3.5 6.2 1.1 113 chr3R 18785851 intron CG7720 - chr3R 18785908 intron CG7720 - chr3R 18785964 intron CG7720 - chr3R_8_18785001 chr3R_18785001 RAL-177 2270 chr3R 18785871 18785898 chr3R 18785943 18785995 16 92 4.5 4.5 4.5 2.9 124 chr3R 18785871 intron CG7720 - chr3R 18785933 intron CG7720 - chr3R 18785995 intron CG7720 - chr3R_16_18785001 chr3R_18785001 RAL-177 2271 chr3R 18791499 18791515 chr3R 18791573 18791614 8 88 3.5 1.0 2.2 2.5 115 chr3R 18791499 intron CG7720 - chr3R 18791556 intron CG7720 - chr3R 18791614 intron CG7720 - chr3R_8_18790001 chr3R_18790001 RAL-177 2272 chr3R 18792783 18792835 chr3R 18792886 18792938 7 102 4.0 0.0 2.0 2.3 155 chr3R 18792783 intron CG7720 - chr3R 18792860 intron CG7720 - chr3R 18792938 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-177 2273 chr3R 18812067 18812103 chr3R 18812155 18812201 14 96 3.5 5.0 4.2 2.7 134 chr3R 18812067 intron CG18208 - chr3R 18812134 intron CG18208 - chr3R 18812201 intron CG18208 - chr3R_14_18810001 chr3R_18810001 RAL-177 2274 chr3R 18860116 18860135 chr3R 18860222 18860241 6 106 4.0 2.5 3.2 1.4 125 chr3R 18860116 intergenic not near genes chr3R 18860178 intergenic not near genes chr3R 18860241 intergenic not near genes chr3R_6_18860001 chr3R_18860001 RAL-177 2275 chr3R 18887582 18887598 chr3R 18887683 18887698 6 101 7.5 5.5 6.5 0.8 116 chr3R 18887582 intergenic not near genes chr3R 18887640 intergenic not near genes chr3R 18887698 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-177 2276 chr3R 19078103 19078149 chr3R 19078215 19078257 6 108 3.0 1.0 2.0 2.0 154 chr3R 19078103 intron cdi - chr3R 19078180 intron cdi - chr3R 19078257 intron cdi - chr3R_6_19075001 chr3R_19075001 RAL-177 2277 chr3R 19106827 19106845 chr3R 19106915 19106920 1360 4 80 2.0 1.0 1.5 1.6 93 chr3R 19106827 intron CG6040 + chr3R 19106874 intron CG6040 + chr3R 19106920 intron CG6040 + chr3R_4_19105001 chr3R_19105001 RAL-177 2278 chr3R 19136407 19136409 chr3R 19139773 19139810 Bari1 14 3375 47.0 39.5 43.2 0.3 3403 chr3R 19136407 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139810 3` UTR Ppcs - chr3R_14_19135001 chr3R_19135001 RAL-177 2279 chr3R 19140248 19140299 chr3R 19140710 19140759 13 457 4.0 1.0 2.5 3.7 511 chr3R 19140248 3` UTR Ppcs - chr3R 19140504 3` UTR Ppcs - chr3R 19140759 3` UTR Ppcs - chr3R_13_19140001 chr3R_19140001 RAL-177 2280 chr3R 19198310 19198361 chr3R 19198452 19198503 16 138 4.0 3.5 3.8 3.3 193 chr3R 19198310 intron CG31475 + chr3R 19198406 intron CG31475 + chr3R 19198503 intron CG31475 + chr3R_16_19195001 chr3R_19195001 RAL-177 2281 chr3R 19273838 19273848 chr3R 19275912 19275942 6 2086 15.5 22.5 19.0 0.3 2104 chr3R 19273838 intergenic not near genes chr3R 19274890 intergenic not near genes chr3R 19275942 intergenic not near genes chr3R_6_19270001 chr3R_19270001 RAL-177 2282 chr3R 19340376 19340430 chr3R 19340473 19340527 28 96 5.5 6.0 5.8 4.1 151 chr3R 19340376 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340527 intergenic not near genes chr3R_28_19340001 chr3R_19340001 RAL-177 2283 chr3R 19364417 19364443 chr3R 19364586 19364597 6 166 2.0 3.5 2.8 1.6 180 chr3R 19364417 intergenic not near genes chr3R 19364507 intergenic not near genes chr3R 19364597 intergenic not near genes chr3R_6_19360001 chr3R_19360001 RAL-177 2284 chr3R 19465975 19465991 chr3R 19466337 19466362 7 361 0.0 2.5 1.2 3.2 387 chr3R 19465975 intron Dys + chr3R 19466168 intron Dys + chr3R 19466362 intron Dys + chr3R_7_19465001 chr3R_19465001 RAL-177 2285 chr3R 19532987 19533023 chr3R 19533198 19533235 5 212 3.5 0.0 1.8 1.8 248 chr3R 19532987 intron Dys + chr3R 19533111 intron Dys + chr3R 19533235 intron Dys + chr3R_5_19530001 chr3R_19530001 RAL-177 2286 chr3R 19590632 19590683 chr3R 19590744 19590788 6 110 0.0 3.0 1.5 2.4 156 chr3R 19590632 exon Dys + chr3R 19590710 intron Dys + chr3R 19590788 exon Dys + chr3R_6_19590001 chr3R_19590001 RAL-177 2287 chr3R 19593490 19593517 chr3R 19593589 19593622 11 99 9.5 2.5 6.0 1.6 132 chr3R 19593490 intron Dys + chr3R 19593556 intron Dys + chr3R 19593622 intron Dys + chr3R_11_19590001 chr3R_19590001 RAL-177 2288 chr3R 19683503 19683540 chr3R 19683663 19683685 15 149 3.0 2.5 2.8 3.9 182 chr3R 19683503 intron Naam + chr3R 19683594 intron Naam + chr3R 19683685 intron Naam + chr3R_15_19680001 chr3R_19680001 RAL-177 2289 chr3R 19702318 19702341 chr3R 19702408 19702443 5 99 6.5 2.0 4.2 1.0 125 chr3R 19702318 intergenic not near genes chr3R 19702380 intergenic not near genes chr3R 19702443 intergenic not near genes chr3R_5_19700001 chr3R_19700001 RAL-177 2290 chr3R 19755407 19755456 chr3R 19755522 19755571 10 114 2.5 2.0 2.2 3.1 164 chr3R 19755407 intron GluClalpha + chr3R 19755489 intron GluClalpha + chr3R 19755571 intron GluClalpha + chr3R_10_19755001 chr3R_19755001 RAL-177 2291 chr3R 19827506 19827556 chr3R 19827612 19827662 15 106 1.5 5.0 3.2 3.6 156 chr3R 19827506 intron bnl - chr3R 19827584 intron bnl - chr3R 19827662 exon bnl - chr3R_15_19825001 chr3R_19825001 RAL-177 2292 chr3R 19945957 19946001 chr3R 19946080 19946085 11 116 3.0 6.0 4.5 2.0 128 chr3R 19945957 intron Hs6st - chr3R 19946021 intron Hs6st - chr3R 19946085 intron Hs6st - chr3R_11_19945001 chr3R_19945001 RAL-177 2293 chr3R 19955335 19955378 chr3R 19955456 19955499 8 121 4.0 4.5 4.2 1.5 164 chr3R 19955335 intron Hs6st - chr3R 19955417 intron Hs6st - chr3R 19955499 intron Hs6st - chr3R_8_19955001 chr3R_19955001 RAL-177 2294 chr3R 19957252 19957297 chr3R 19957348 19957386 5 95 2.5 2.5 2.5 1.4 134 chr3R 19957252 intron Hs6st - chr3R 19957319 intron Hs6st - chr3R 19957386 intron Hs6st - chr3R_5_19955001 chr3R_19955001 RAL-177 2295 chr3R 20077023 20077069 chr3R 20077129 20077175 18 103 1.0 7.5 4.2 3.5 152 chr3R 20077023 intergenic not near genes chr3R 20077099 intergenic not near genes chr3R 20077175 intergenic not near genes chr3R_18_20075001 chr3R_20075001 RAL-177 2296 chr3R 20109515 20109566 chr3R 20114741 20114792 copia 16 5226 5.0 2.5 3.8 3.3 5277 chr3R 20109515 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114792 intergenic CG10887 + chr3R_16_20110001 chr3R_20110001 RAL-177 2297 chr3R 20150552 20150571 chr3R 20150693 20150717 5 142 2.0 5.5 3.8 1.0 165 chr3R 20150552 intergenic not near genes chr3R 20150634 intergenic not near genes chr3R 20150717 intergenic not near genes chr3R_5_20150001 chr3R_20150001 RAL-177 2298 chr3R 20156677 20156718 chr3R 20165867 20165908 roo 16 9188 4.0 3.0 3.5 3.6 9231 chr3R 20156677 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165908 intergenic not near genes chr3R_16_20160001 chr3R_20160001 RAL-177 2299 chr3R 20188800 20188836 chr3R 20188906 20188947 8 110 2.5 3.0 2.8 2.1 147 chr3R 20188800 intergenic not near genes chr3R 20188874 intergenic not near genes chr3R 20188947 intergenic not near genes chr3R_8_20185001 chr3R_20185001 RAL-177 2300 chr3R 20205555 20205595 chr3R 20205697 20205734 12 142 2.5 7.0 4.8 2.1 179 chr3R 20205555 intron Nlg4 + chr3R 20205644 intron Nlg4 + chr3R 20205734 intron Nlg4 + chr3R_12_20205001 chr3R_20205001 RAL-177 2301 chr3R 20205919 20205936 chr3R 20206023 20206040 5 104 0.0 1.0 0.5 3.3 121 chr3R 20205919 intron Nlg4 + chr3R 20205980 intron Nlg4 + chr3R 20206040 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-177 2302 chr3R 20245265 20245306 chr3R 20248895 20248936 F-element 18 3629 12.0 1.5 6.8 2.3 3671 chr3R 20245265 3` UTR Nlg4 + chr3R 20247100 intergenic not near genes chr3R 20248936 intergenic not near genes chr3R_18_20245001 chr3R_20245001 RAL-177 2303 chr3R 20256844 20256869 chr3R 20256942 20256956 14 97 0.0 6.0 3.0 3.5 112 chr3R 20256844 intron cic + chr3R 20256900 intron cic + chr3R 20256956 intron cic + chr3R_14_20255001 chr3R_20255001 RAL-177 2304 chr3R 20266496 20266545 chr3R 20272987 20273036 Burdock 19 6490 6.0 4.0 5.0 3.2 6540 chr3R 20266496 intron cic + chr3R 20269766 intron cic + chr3R 20273036 intron cic + chr3R_19_20265001 chr3R_20265001 RAL-177 2305 chr3R 20282257 20282307 chr3R 20282353 20282403 17 96 1.5 5.5 3.5 3.8 146 chr3R 20282257 intron cic + chr3R 20282330 intron cic + chr3R 20282403 intron cic + chr3R_17_20280001 chr3R_20280001 RAL-177 2306 chr3R 20330982 20331032 chr3R 20331488 20331527 roo 22 503 5.5 10.0 7.8 2.5 545 chr3R 20330982 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331527 intergenic not near genes chr3R_22_20330001 chr3R_20330001 RAL-177 2307 chr3R 20350186 20350234 chr3R 20350284 20350335 12 100 3.0 2.0 2.5 3.4 149 chr3R 20350186 intergenic not near genes chr3R 20350260 intergenic not near genes chr3R 20350335 intergenic not near genes chr3R_12_20350001 chr3R_20350001 RAL-177 2308 chr3R 20450138 20450144 chr3R 20450243 20450249 4 105 0.0 2.0 1.0 2.0 111 chr3R 20450138 intron Gfrl - chr3R 20450194 intron Gfrl - chr3R 20450249 intron Gfrl - chr3R_4_20450001 chr3R_20450001 RAL-177 2309 chr3R 20499851 20499895 chr3R 20499961 20500005 16 110 2.5 4.0 3.2 3.8 154 chr3R 20499851 intergenic Dic2 - chr3R 20499928 intergenic Dic2 - chr3R 20500005 3` UTR Dic2 - chr3R_16_20495001 chr3R_20495001 RAL-177 2310 chr3R 20512984 20513034 chr3R 20515707 20515757 opus 18 2723 7.0 8.0 7.5 2.1 2773 chr3R 20512984 intergenic not near genes chr3R 20514370 intergenic not near genes chr3R 20515757 intergenic not near genes chr3R_18_20510001 chr3R_20510001 RAL-177 2311 chr3R 20516528 20516571 chr3R 20516904 20516947 7 374 2.0 2.0 2.0 2.3 419 chr3R 20516528 intergenic not near genes chr3R 20516738 intergenic not near genes chr3R 20516947 intergenic not near genes chr3R_7_20515001 chr3R_20515001 RAL-177 2312 chr3R 20722835 20722875 chr3R 20722982 20722998 8 140 2.5 4.0 3.2 1.9 163 chr3R 20722835 intergenic not near genes chr3R 20722916 intergenic not near genes chr3R 20722998 intergenic not near genes chr3R_8_20720001 chr3R_20720001 RAL-177 2313 chr3R 20730909 20731061 chr3R 20731029 20731169 16 113 0.5 0.5 0.5 10.7 260 chr3R 20730909 intergenic not near genes chr3R 20731039 intergenic not near genes chr3R 20731169 intergenic CG31205 + chr3R_16_20730001 chr3R_20730001 RAL-177 2314 chr3R 20793929 20793939 chr3R 20794022 20794038 4 95 4.5 8.0 6.2 0.6 109 chr3R 20793929 intron Syp + chr3R 20793984 intron Syp + chr3R 20794038 intron Syp + chr3R_4_20790001 chr3R_20790001 RAL-177 2315 chr3R 20854451 20854507 chr3R 20859266 20859317 Doc 5 4814 4.0 3.5 3.8 1.0 4866 chr3R 20854451 intron Ir93a - chr3R 20856884 intron Ir93a - chr3R 20859317 exon Ir93a - chr3R_5_20855001 chr3R_20855001 RAL-177 2316 chr3R 20878370 20878400 chr3R 20878476 20878506 11 105 7.0 3.5 5.2 1.8 136 chr3R 20878370 intergenic TotZ +,CR44048 - chr3R 20878438 3` UTR CR44048 - chr3R 20878506 3` UTR CR44048 - chr3R_11_20875001 chr3R_20875001 RAL-177 2317 chr3R 20936066 20936101 chr3R 20936163 20936198 12 95 9.0 4.0 6.5 1.6 132 chr3R 20936066 intron CG31191 - chr3R 20936132 intron CG31191 - chr3R 20936198 intron CG31191 - chr3R_12_20935001 chr3R_20935001 RAL-177 2318 chr3R 20942791 20942826 chr3R 20942887 20942910 16 92 1.5 4.5 3.0 4.0 119 chr3R 20942791 intron CG31191 - chr3R 20942850 intron CG31191 - chr3R 20942910 intron CG31191 - chr3R_16_20940001 chr3R_20940001 RAL-177 2319 chr3R 21108020 21108057 chr3R 21108301 21108338 14 279 5.5 5.5 5.5 2.2 318 chr3R 21108020 intergenic Sec15 -,rtet + chr3R 21108179 intergenic Sec15 -,rtet + chr3R 21108338 intergenic rtet +,Sec15 - chr3R_14_21105001 chr3R_21105001 RAL-177 2320 chr3R 21132612 21132649 chr3R 21132715 21132751 7 103 5.5 0.0 2.8 1.8 139 chr3R 21132612 3` UTR Ice2 + chr3R 21132682 3` UTR Ice2 + chr3R 21132751 3` UTR CG7009 - chr3R_7_21130001 chr3R_21130001 RAL-177 2321 chr3R 21141656 21141695 chr3R 21150157 21150166 Tirant 4 8492 2.5 1.5 2.0 1.3 8510 chr3R 21141656 intron SNF4Agamma + chr3R 21145911 intron SNF4Agamma + chr3R 21150166 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-177 2322 chr3R 21154532 21154587 chr3R 21154757 21154822 11 231 5.0 0.0 2.5 3.1 290 chr3R 21154532 intron SNF4Agamma + chr3R 21154677 intron SNF4Agamma + chr3R 21154822 intron SNF4Agamma + chr3R_11_21150001 chr3R_21150001 RAL-177 2323 chr3R 21163261 21163275 chr3R 21163333 21163373 7 90 3.5 2.5 3.0 1.8 112 chr3R 21163261 intron SNF4Agamma + chr3R 21163317 intron SNF4Agamma + chr3R 21163373 intron SNF4Agamma + chr3R_7_21160001 chr3R_21160001 RAL-177 2324 chr3R 21214727 21214756 chr3R 21214916 21214943 10 191 3.0 1.5 2.2 3.1 216 chr3R 21214727 intergenic CG5862 + chr3R 21214835 intergenic CG5862 + chr3R 21214943 intergenic CG5862 + chr3R_10_21210001 chr3R_21210001 RAL-177 2325 chr3R 21240744 21240752 chr3R 21240861 21240869 4 116 2.5 0.0 1.2 1.8 125 chr3R 21240744 intergenic not near genes chr3R 21240806 intergenic not near genes chr3R 21240869 intergenic not near genes chr3R_4_21240001 chr3R_21240001 RAL-177 2326 chr3R 21265468 21265512 chr3R 21265722 21265766 7 254 0.5 3.5 2.0 2.3 298 chr3R 21265468 intergenic ETHR + chr3R 21265617 intergenic Rab1 -,ETHR + chr3R 21265766 intergenic Rab1 - chr3R_7_21265001 chr3R_21265001 RAL-177 2327 chr3R 21383267 21383276 chr3R 21383367 21383376 6 99 3.0 2.0 2.5 1.7 109 chr3R 21383267 intergenic not near genes chr3R 21383322 intergenic not near genes chr3R 21383376 intergenic not near genes chr3R_6_21380001 chr3R_21380001 RAL-177 2328 chr3R 21464382 21464427 chr3R 21464488 21464531 13 105 5.0 2.0 3.5 2.9 149 chr3R 21464382 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464531 intergenic not near genes chr3R_13_21460001 chr3R_21460001 RAL-177 2329 chr3R 21472010 21472015 chr3R 21472098 21472116 4 98 9.5 9.5 9.5 0.4 106 chr3R 21472010 intergenic not near genes chr3R 21472063 intergenic not near genes chr3R 21472116 intergenic not near genes chr3R_4_21470001 chr3R_21470001 RAL-177 2330 chr3R 21472017 21472030 chr3R 21472097 21472131 9 98 7.0 9.5 8.2 1.0 114 chr3R 21472017 intergenic not near genes chr3R 21472074 intergenic not near genes chr3R 21472131 intergenic not near genes chr3R_9_21470001 chr3R_21470001 RAL-177 2331 chr3R 21481366 21481370 chr3R 21481477 21481481 4 111 15.0 0.0 7.5 0.5 115 chr3R 21481366 intergenic not near genes chr3R 21481424 intergenic not near genes chr3R 21481481 intergenic not near genes chr3R_4_21480001 chr3R_21480001 RAL-177 2332 chr3R 21494660 21494701 chr3R 21494760 21494801 13 100 5.5 3.5 4.5 2.4 141 chr3R 21494660 intergenic not near genes chr3R 21494730 intergenic not near genes chr3R 21494801 intergenic not near genes chr3R_13_21490001 chr3R_21490001 RAL-177 2333 chr3R 21518000 21518272 chr3R 21518149 21518346 13 126 0.0 0.0 0.0 13.0 346 chr3R 21518000 intergenic not near genes chr3R 21518173 intergenic not near genes chr3R 21518346 intergenic not near genes chr3R_13_21515001 chr3R_21515001 RAL-177 2334 chr3R 21519975 21520137 chr3R 21520096 21520236 19 118 1.5 1.5 1.5 7.6 261 chr3R 21519975 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520236 intergenic not near genes chr3R_19_21520001 chr3R_21520001 RAL-177 2335 chr3R 21600224 21600275 chr3R 21600323 21600373 13 97 0.0 8.0 4.0 2.6 149 chr3R 21600224 intron InR - chr3R 21600298 intron InR - chr3R 21600373 intron InR - chr3R_13_21600001 chr3R_21600001 RAL-177 2336 chr3R 21725671 21725678 chr3R 21725827 21725834 4 156 0.0 8.5 4.2 0.8 163 chr3R 21725671 intergenic not near genes chr3R 21725752 intergenic not near genes chr3R 21725834 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-177 2337 chr3R 21761108 21761155 chr3R 21768513 21768567 mdg1 20 7405 4.5 3.5 4.0 4.0 7459 chr3R 21761108 exon CG42335 + chr3R 21764838 intron CG42335 + chr3R 21768567 exon CG42335 + chr3R_20_21760001 chr3R_21760001 RAL-177 2338 chr3R 8339246 8339246 chr3R 21907534 21907534 5 13568288 29.5 12.5 21.0 0.2 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-177 2339 chr3R 21907534 21907534 chr3R 28831801 28831805 12 6924268 13.5 15.0 14.2 0.8 6924271 chr3R 21907534 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831805 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-177 2340 chr3R 21907535 21907535 chr3R 28831801 28831802 4 6924266 13.0 15.0 14.0 0.3 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_4_25365001 chr3R_25365001 RAL-177 2341 chr3R 21907536 21907536 chr3R 28831801 28831802 23 6924266 13.0 15.0 14.0 1.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_23_25365001 chr3R_25365001 RAL-177 2342 chr3R 21924008 21924049 chr3R 21924100 21924159 13 106 3.0 2.0 2.5 3.7 151 chr3R 21924008 intergenic not near genes chr3R 21924084 intergenic not near genes chr3R 21924159 intergenic not near genes chr3R_13_21920001 chr3R_21920001 RAL-177 2343 chr3R 21939673 21939720 chr3R 21939801 21939848 33 127 7.5 3.5 5.5 5.1 175 chr3R 21939673 intergenic not near genes chr3R 21939760 intergenic not near genes chr3R 21939848 intergenic not near genes chr3R_33_21935001 chr3R_21935001 RAL-177 2344 chr3R 21985215 21985257 chr3R 21985340 21985377 8 124 5.0 1.5 3.2 1.9 162 chr3R 21985215 intron Eip93F + chr3R 21985296 intron Eip93F + chr3R 21985377 intron Eip93F + chr3R_8_21985001 chr3R_21985001 RAL-177 2345 chr3R 22055557 22055558 chr3R 22055755 22055765 4 204 2.0 5.0 3.5 0.9 208 chr3R 22055557 intron how + chr3R 22055661 intron how + chr3R 22055765 intron how + chr3R_4_22055001 chr3R_22055001 RAL-177 2346 chr3R 22055565 22055589 chr3R 22055754 22055798 7 205 2.0 5.0 3.5 1.6 233 chr3R 22055565 intron how + chr3R 22055682 intron how + chr3R 22055798 intron how + chr3R_7_22055001 chr3R_22055001 RAL-177 2347 chr3R 22056960 22057009 chr3R 22057064 22057113 15 103 3.0 4.0 3.5 3.3 153 chr3R 22056960 intron how + chr3R 22057036 intron how + chr3R 22057113 intron how + chr3R_15_22055001 chr3R_22055001 RAL-177 2348 chr3R 22126828 22126862 chr3R 22126954 22126988 12 126 7.5 0.0 3.8 2.5 160 chr3R 22126828 intron CG42390 + chr3R 22126908 intron CG42390 + chr3R 22126988 intron CG42390 + chr3R_12_22125001 chr3R_22125001 RAL-177 2349 chr3R 22239477 22239518 chr3R 22248557 22248586 roo 8 9072 5.0 1.0 3.0 2.0 9109 chr3R 22239477 intron SKIP + chr3R 22244032 intron SKIP + chr3R 22248586 intron SKIP + chr3R_8_22240001 chr3R_22240001 RAL-177 2350 chr3R 22304879 22304895 chr3R 22305064 22305074 6 182 2.5 3.0 2.8 1.6 195 chr3R 22304879 intergenic CG7084 + chr3R 22304976 intergenic not near genes chr3R 22305074 intergenic not near genes chr3R_6_22300001 chr3R_22300001 RAL-177 2351 chr3R 22450531 22450571 chr3R 22453186 22453231 NOF 13 2658 4.5 5.0 4.8 2.2 2700 chr3R 22450531 intron CG34376 + chr3R 22451881 intron CG34376 + chr3R 22453231 intron CG34376 + chr3R_13_22450001 chr3R_22450001 RAL-177 2352 chr3R 22481314 22481335 chr3R 22481422 22481443 10 107 4.0 10.5 7.2 1.2 129 chr3R 22481314 intron Nrx-1 + chr3R 22481378 intron Nrx-1 + chr3R 22481443 intron Nrx-1 + chr3R_10_22480001 chr3R_22480001 RAL-177 2353 chr3R 22538423 22538473 chr3R 22538527 22538578 18 104 4.5 3.5 4.0 3.6 155 chr3R 22538423 intron CG5326 - chr3R 22538500 intron CG5326 - chr3R 22538578 intron CG5326 - chr3R_18_22535001 chr3R_22535001 RAL-177 2354 chr3R 22675165 22675213 chr3R 22675291 22675339 21 125 4.5 3.5 4.0 4.2 174 chr3R 22675165 intron wake + chr3R 22675252 intron wake + chr3R 22675339 intron wake + chr3R_21_22675001 chr3R_22675001 RAL-177 2355 chr3R 22797743 22797923 chr3R 22797849 22798039 21 107 0.0 0.5 0.2 17.5 296 chr3R 22797743 intergenic not near genes chr3R 22797891 intergenic not near genes chr3R 22798039 intergenic not near genes chr3R_21_22795001 chr3R_22795001 RAL-177 2356 chr3R 22840803 22840848 chr3R 22841285 22841327 13 481 4.5 7.5 6.0 1.9 524 chr3R 22840803 intergenic not near genes chr3R 22841065 intergenic not near genes chr3R 22841327 intergenic not near genes chr3R_13_22840001 chr3R_22840001 RAL-177 2357 chr3R 22863903 22863927 chr3R 22864001 22864025 5 98 3.0 3.0 3.0 1.2 122 chr3R 22863903 intergenic not near genes chr3R 22863964 intergenic not near genes chr3R 22864025 intergenic not near genes chr3R_5_22860001 chr3R_22860001 RAL-177 2358 chr3R 22880582 22880614 chr3R 22880679 22880711 6 97 5.5 4.0 4.8 1.0 129 chr3R 22880582 intergenic not near genes chr3R 22880646 intergenic not near genes chr3R 22880711 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-177 2359 chr3R 22880922 22880953 chr3R 22881080 22881111 15 158 4.5 4.5 4.5 2.7 189 chr3R 22880922 intergenic not near genes chr3R 22881016 intergenic not near genes chr3R 22881111 intergenic not near genes chr3R_15_22880001 chr3R_22880001 RAL-177 2360 chr3R 22881187 22881231 chr3R 22884913 22884956 Doc 8 3722 7.0 4.0 5.5 1.2 3769 chr3R 22881187 intergenic not near genes chr3R 22883072 intergenic not near genes chr3R 22884956 intergenic not near genes chr3R_8_22880001 chr3R_22880001 RAL-177 2361 chr3R 22919137 22919189 chr3R 22919254 22919256 10 105 3.0 2.0 2.5 2.9 119 chr3R 22919137 intron klg + chr3R 22919196 intron klg + chr3R 22919256 intron klg + chr3R_10_22915001 chr3R_22915001 RAL-177 2362 chr3R 23073634 23073687 chr3R 23073743 23073796 11 104 4.5 1.0 2.8 2.9 162 chr3R 23073634 intron CG13830 - chr3R 23073715 intron CG13830 - chr3R 23073796 intron CG13830 - chr3R_11_23070001 chr3R_23070001 RAL-177 2363 chr3R 23211963 23211992 chr3R 23212060 23212083 9 96 0.0 4.0 2.0 3.0 120 chr3R 23211963 intron cnc - chr3R 23212023 intron cnc - chr3R 23212083 intron cnc - chr3R_9_23210001 chr3R_23210001 RAL-177 2364 chr3R 23260947 23260969 chr3R 23261038 23261071 11 93 5.0 2.5 3.8 2.3 124 chr3R 23260947 3` UTR orb - chr3R 23261009 3` UTR orb - chr3R 23261071 3` UTR orb - chr3R_11_23260001 chr3R_23260001 RAL-177 2365 chr3R 23324006 23324056 chr3R 23324112 23324162 21 106 6.0 4.0 5.0 3.5 156 chr3R 23324006 intron pnt - chr3R 23324084 intron pnt - chr3R 23324162 intron pnt - chr3R_21_23320001 chr3R_23320001 RAL-177 2366 chr3R 23356978 23356996 chr3R 23357084 23357102 12 106 11.5 14.0 12.8 0.9 124 chr3R 23356978 intron Sec13 + chr3R 23357040 intron Sec13 + chr3R 23357102 intron Sec13 + chr3R_12_23355001 chr3R_23355001 RAL-177 2367 chr3R 23446281 23446307 chr3R 23446359 23446394 6 92 6.5 4.0 5.2 1.0 113 chr3R 23446281 intron CG4374 - chr3R 23446338 intron CG4374 - chr3R 23446394 intron CG4374 - chr3R_6_23445001 chr3R_23445001 RAL-177 2368 chr3R 23492243 23492291 chr3R 23492548 23492596 16 303 4.0 6.5 5.2 2.6 353 chr3R 23492243 intergenic not near genes chr3R 23492420 intergenic not near genes chr3R 23492596 intergenic not near genes chr3R_16_23490001 chr3R_23490001 RAL-177 2369 chr3R 23528239 23528282 chr3R 23528348 23528391 10 106 3.5 2.5 3.0 2.5 152 chr3R 23528239 intron CG10175 - chr3R 23528315 intron CG10175 - chr3R 23528391 intron CG10175 - chr3R_10_23525001 chr3R_23525001 RAL-177 2370 chr3R 23536928 23536980 chr3R 23537130 23537182 16 200 7.5 3.0 5.2 2.6 254 chr3R 23536928 intergenic CG10168 -,CG16732 - chr3R 23537055 exon CG10168 - chr3R 23537182 exon CG10168 - chr3R_16_23535001 chr3R_23535001 RAL-177 2371 chr3R 23548098 23548102 chr3R 23548374 23548427 5 297 3.5 3.0 3.2 1.2 329 chr3R 23548098 intergenic not near genes chr3R 23548262 intergenic not near genes chr3R 23548427 intergenic not near genes chr3R_5_23545001 chr3R_23545001 RAL-177 2372 chr3R 23558380 23558420 chr3R 23560181 23560221 Bari1 15 1801 7.0 3.5 5.2 2.4 1841 chr3R 23558380 intron beat-IV + chr3R 23559300 intron beat-IV + chr3R 23560221 intron beat-IV + chr3R_15_23555001 chr3R_23555001 RAL-177 2373 chr3R 23564420 23564475 chr3R 23564584 23564639 21 164 2.5 5.5 4.0 4.2 219 chr3R 23564420 intron beat-IV + chr3R 23564530 intron beat-IV + chr3R 23564639 intron beat-IV + chr3R_21_23560001 chr3R_23560001 RAL-177 2374 chr3R 23677167 23677198 chr3R 23677270 23677296 13 99 8.0 7.5 7.8 1.5 129 chr3R 23677167 intergenic CG13822 + chr3R 23677232 intergenic CG13822 + chr3R 23677296 intergenic CG13822 + chr3R_13_23675001 chr3R_23675001 RAL-177 2375 chr3R 23684675 23684719 chr3R 23685181 23685184 roo 9 492 4.5 4.5 4.5 1.6 509 chr3R 23684675 exon CG18754 + chr3R 23684930 intron CG18754 + chr3R 23685184 exon CG18754 + chr3R_9_23680001 chr3R_23680001 RAL-177 2376 chr3R 23835388 23835433 chr3R 23844558 23844603 roo 19 9168 4.0 5.0 4.5 3.5 9215 chr3R 23835388 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844603 intron CG34355 + chr3R_19_23835001 chr3R_23835001 RAL-177 2377 chr3R 23851077 23851084 chr3R 23858755 23858771 opus 7 7686 8.5 12.0 10.2 0.6 7694 chr3R 23851077 3` UTR CG34355 + chr3R 23854924 intergenic not near genes chr3R 23858771 intergenic not near genes chr3R_7_23850001 chr3R_23850001 RAL-177 2378 chr3R 23883189 23883199 chr3R 23883286 23883296 4 97 5.5 8.5 7.0 0.5 107 chr3R 23883189 intron Pli - chr3R 23883242 intron Pli - chr3R 23883296 intron Pli - chr3R_4_23880001 chr3R_23880001 RAL-177 2379 chr3R 23888064 23888116 chr3R 23888170 23888222 19 106 9.0 3.5 6.2 2.6 158 chr3R 23888064 intron Pli - chr3R 23888143 intron Pli - chr3R 23888222 intron Pli - chr3R_19_23885001 chr3R_23885001 RAL-177 2380 chr3R 23944891 23944934 chr3R 23944996 23945039 17 103 6.5 3.5 5.0 2.8 148 chr3R 23944891 intron CG12268 - chr3R 23944965 intron CG12268 - chr3R 23945039 exon CG12268 - chr3R_17_23940001 chr3R_23940001 RAL-177 2381 chr3R 23949020 23949074 chr3R 23949117 23949168 27 95 2.5 3.0 2.8 7.1 148 chr3R 23949020 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949168 intergenic not near genes chr3R_27_23945001 chr3R_23945001 RAL-177 2382 chr3R 24011653 24011679 chr3R 24011756 24011782 6 103 5.5 5.5 5.5 0.9 129 chr3R 24011653 intron KrT95D - chr3R 24011718 intron KrT95D - chr3R 24011782 intron KrT95D - chr3R_6_24010001 chr3R_24010001 RAL-177 2383 chr3R 24023361 24023370 chr3R 24023460 24023469 4 99 3.0 0.0 1.5 1.6 108 chr3R 24023361 intron KrT95D - chr3R 24023415 intron KrT95D - chr3R 24023469 intron KrT95D - chr3R_4_24020001 chr3R_24020001 RAL-177 2384 chr3R 24072078 24072106 chr3R 24072536 24072564 jockey 7 458 6.0 11.5 8.8 0.7 486 chr3R 24072078 intron 4EHP - chr3R 24072321 intron 4EHP - chr3R 24072564 intron 4EHP - chr3R_7_24070001 chr3R_24070001 RAL-177 2385 chr3R 24076906 24076944 chr3R 24078393 24078431 hobo 8 1484 2.5 3.0 2.8 2.1 1525 chr3R 24076906 intron 4EHP - chr3R 24077668 intron 4EHP - chr3R 24078431 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-177 2386 chr3R 24199723 24199760 chr3R 24199823 24199860 11 100 5.5 4.5 5.0 1.8 137 chr3R 24199723 intron twin - chr3R 24199792 intron twin - chr3R 24199860 intron twin - chr3R_11_24195001 chr3R_24195001 RAL-177 2387 chr3R 24207216 24207240 chr3R 24212299 24212333 flea 8 5094 9.0 18.0 13.5 0.6 5117 chr3R 24207216 intron twin - chr3R 24209774 intron twin - chr3R 24212333 intron twin - chr3R_8_24205001 chr3R_24205001 RAL-177 2388 chr3R 24291105 24291146 chr3R 24291209 24291256 9 100 5.5 7.0 6.2 1.2 151 chr3R 24291105 exon CG6364 + chr3R 24291180 intron CG6364 + chr3R 24291256 intron CG6364 + chr3R_9_24290001 chr3R_24290001 RAL-177 2389 chr3R 24434220 24434274 chr3R 24434318 24434372 7 98 2.0 3.5 2.8 1.8 152 chr3R 24434220 intron nAChRalpha1 - chr3R 24434296 intron nAChRalpha1 - chr3R 24434372 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-177 2390 chr3R 24493041 24493068 chr3R 24493147 24493174 7 105 8.0 6.5 7.2 0.9 133 chr3R 24493041 intergenic not near genes chr3R 24493108 intergenic not near genes chr3R 24493174 intergenic not near genes chr3R_7_24490001 chr3R_24490001 RAL-177 2391 chr3R 24493267 24493306 chr3R 24493517 24493556 BS 9 250 6.0 6.5 6.2 1.2 289 chr3R 24493267 intergenic not near genes chr3R 24493412 intergenic not near genes chr3R 24493556 intergenic not near genes chr3R_9_24490001 chr3R_24490001 RAL-177 2392 chr3R 24495271 24495319 chr3R 24495370 24495418 14 96 3.0 4.0 3.5 3.1 147 chr3R 24495271 intergenic not near genes chr3R 24495344 intergenic not near genes chr3R 24495418 intergenic not near genes chr3R_14_24495001 chr3R_24495001 RAL-177 2393 chr3R 24527785 24527836 chr3R 24527896 24527947 23 110 2.0 6.0 4.0 4.6 162 chr3R 24527785 intergenic CG13618 +,CG6607 + chr3R 24527866 intergenic CG6607 +,CG13618 + chr3R 24527947 intergenic CG6607 +,CG13618 + chr3R_23_24525001 chr3R_24525001 RAL-177 2394 chr3R 24582045 24582084 chr3R 24582150 24582170 14 102 5.5 4.5 5.0 2.3 125 chr3R 24582045 intron CG13624 - chr3R 24582108 intron CG13624 - chr3R 24582170 intron CG13624 - chr3R_14_24580001 chr3R_24580001 RAL-177 2395 chr3R 24594657 24594665 chr3R 24594917 24594925 pogo 4 260 5.5 4.5 5.0 0.7 268 chr3R 24594657 intron mld + chr3R 24594791 intron mld + chr3R 24594925 intron mld + chr3R_4_24590001 chr3R_24590001 RAL-177 2396 chr3R 24667585 24667626 chr3R 24667682 24667723 15 96 5.5 0.0 2.8 3.9 138 chr3R 24667585 intron slo + chr3R 24667654 intron slo + chr3R 24667723 intron slo + chr3R_15_24665001 chr3R_24665001 RAL-177 2397 chr3R 24670165 24670181 chr3R 24670270 24670285 7 105 7.0 2.0 4.5 1.3 120 chr3R 24670165 intron slo + chr3R 24670225 intron slo + chr3R 24670285 intron slo + chr3R_7_24670001 chr3R_24670001 RAL-177 2398 chr3R 24730078 24730099 chr3R 24732469 24732497 Doc 7 2396 5.0 0.5 2.8 1.8 2419 chr3R 24730078 intron tok + chr3R 24731288 intron tok + chr3R 24732497 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-177 2399 chr3R 24743010 24743063 chr3R 24743115 24743166 15 104 2.5 2.5 2.5 4.3 156 chr3R 24743010 intron tok + chr3R 24743088 intron tok + chr3R 24743166 exon tok + chr3R_15_24740001 chr3R_24740001 RAL-177 2400 chr3R 24854867 24854912 chr3R 24854969 24855014 12 102 4.0 5.5 4.8 2.1 147 chr3R 24854867 3` UTR,3` UTR nct +,HdacX - chr3R 24854940 3` UTR HdacX - chr3R 24855014 3` UTR HdacX - chr3R_12_24850001 chr3R_24850001 RAL-177 2401 chr3R 24912471 24912511 chr3R 24912573 24912582 17 99 2.0 3.0 2.5 4.9 111 chr3R 24912471 intergenic not near genes chr3R 24912526 intergenic CR44267 + chr3R 24912582 intergenic CR44267 + chr3R_17_24910001 chr3R_24910001 RAL-177 2402 chr3R 24927108 24927151 chr3R 24931919 24931962 Doc 8 4811 7.5 6.0 6.8 1.0 4854 chr3R 24927108 intergenic Trf4-2 + chr3R 24929535 intergenic not near genes chr3R 24931962 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-177 2403 chr3R 25004894 25004913 chr3R 25004997 25005016 11 103 3.0 5.5 4.2 2.1 122 chr3R 25004894 intron tnc + chr3R 25004955 intron tnc + chr3R 25005016 intron tnc + chr3R_11_25000001 chr3R_25000001 RAL-177 2404 chr3R 25166236 25166395 chr3R 25166336 25166491 18 97 2.0 0.0 1.0 9.0 255 chr3R 25166236 intergenic not near genes chr3R 25166364 intergenic not near genes chr3R 25166491 intergenic not near genes chr3R_18_25165001 chr3R_25165001 RAL-177 2405 chr3R 25235797 25235830 chr3R 25235897 25235930 9 100 8.0 4.5 6.2 1.2 133 chr3R 25235797 intergenic CG10420 - chr3R 25235864 intergenic CG10420 - chr3R 25235930 intergenic CG10420 - chr3R_9_25235001 chr3R_25235001 RAL-177 2406 chr3R 25296150 25296197 chr3R 25296251 25296298 11 101 2.0 5.5 3.8 2.3 148 chr3R 25296150 3` UTR CG31097 - chr3R 25296224 3` UTR CG31097 - chr3R 25296298 3` UTR CG31097 - chr3R_11_25295001 chr3R_25295001 RAL-177 2407 chr3R 25368454 25368475 chr3R 25368592 25368613 6 138 4.5 0.0 2.2 1.9 159 chr3R 25368454 intron Fur1 - chr3R 25368534 intron Fur1 - chr3R 25368613 intron Fur1 - chr3R_6_25365001 chr3R_25365001 RAL-177 2408 chr3R 25411759 25411801 chr3R 25411875 25411924 10 116 1.5 3.5 2.5 2.9 165 chr3R 25411759 intron Fur1 - chr3R 25411842 intron Fur1 - chr3R 25411924 intron Fur1 - chr3R_10_25410001 chr3R_25410001 RAL-177 2409 chr3R 25422045 25422062 chr3R 25422146 25422163 6 101 10.0 0.0 5.0 1.0 118 chr3R 25422045 intron Fur1 - chr3R 25422104 intron Fur1 - chr3R 25422163 intron Fur1 - chr3R_6_25420001 chr3R_25420001 RAL-177 2410 chr3R 25431414 25431443 chr3R 25431520 25431549 6 105 2.5 3.0 2.8 1.6 135 chr3R 25431414 intron Fur1 - chr3R 25431482 intron Fur1 - chr3R 25431549 intron Fur1 - chr3R_6_25430001 chr3R_25430001 RAL-177 2411 chr3R 25514422 25514449 chr3R 25514523 25514550 15 101 0.0 5.5 2.8 3.9 128 chr3R 25514422 intergenic not near genes chr3R 25514486 intergenic not near genes chr3R 25514550 intergenic not near genes chr3R_15_25510001 chr3R_25510001 RAL-177 2412 chr3R 7773344 7773344 chr3R 25538124 25538124 6 17764780 24.5 16.0 20.2 0.3 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_6_16655001 chr3R_16655001 RAL-177 2413 chr3R 25612813 25612864 chr3R 25612937 25612945 12 109 1.5 4.0 2.8 3.2 132 chr3R 25612813 intron Npl4 - chr3R 25612879 intron Npl4 - chr3R 25612945 intron Npl4 - chr3R_12_25610001 chr3R_25610001 RAL-177 2414 chr3R 25669049 25669084 chr3R 25669163 25669187 11 113 3.0 3.0 3.0 2.8 138 chr3R 25669049 intron Lgr3 + chr3R 25669118 intron Lgr3 + chr3R 25669187 intron Lgr3 + chr3R_11_25665001 chr3R_25665001 RAL-177 2415 chr3R 25671220 25671274 chr3R 25671338 25671394 9 117 3.5 2.0 2.8 2.4 174 chr3R 25671220 intron Lgr3 + chr3R 25671307 intron Lgr3 + chr3R 25671394 intron Lgr3 + chr3R_9_25670001 chr3R_25670001 RAL-177 2416 chr3R 25720784 25720837 chr3R 25720896 25720942 13 106 0.0 5.0 2.5 3.7 158 chr3R 25720784 intron LpR2 - chr3R 25720863 intron LpR2 - chr3R 25720942 intron LpR2 - chr3R_13_25720001 chr3R_25720001 RAL-177 2417 chr3R 25725815 25725853 chr3R 25734995 25735033 roo 12 9179 4.0 3.0 3.5 2.7 9218 chr3R 25725815 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735033 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-177 2418 chr3R 25741923 25741964 chr3R 25742009 25742060 12 95 5.0 6.0 5.5 1.8 137 chr3R 25741923 3` UTR LpR1 - chr3R 25741992 exon LpR1 - chr3R 25742060 intron LpR1 - chr3R_12_25740001 chr3R_25740001 RAL-177 2419 chr3R 25762918 25762971 chr3R 25763027 25763080 26 109 3.0 3.0 3.0 6.5 162 chr3R 25762918 5` UTR LpR1 - chr3R 25762999 5` UTR LpR1 - chr3R 25763080 5` UTR LpR1 - chr3R_26_25760001 chr3R_25760001 RAL-177 2420 chr3R 25801249 25801293 chr3R 25802253 25802285 19 1001 2.5 1.0 1.8 6.8 1036 chr3R 25801249 intergenic not near genes chr3R 25801767 intergenic not near genes chr3R 25802285 intergenic not near genes chr3R_19_25800001 chr3R_25800001 RAL-177 2421 chr3R 25832681 25832722 chr3R 25841877 25841919 roo 12 9196 3.5 5.0 4.2 2.3 9238 chr3R 25832681 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841919 exon alpha4GT2 + chr3R_12_25835001 chr3R_25835001 RAL-177 2422 chr3R 25843618 25843669 chr3R 25843768 25843819 17 150 1.5 5.5 3.5 3.8 201 chr3R 25843618 intergenic CR45653 + chr3R 25843718 intergenic CR45653 + chr3R 25843819 intergenic CR45653 + chr3R_17_25840001 chr3R_25840001 RAL-177 2423 chr3R 25861806 25861849 chr3R 25861903 25861946 10 97 4.5 3.5 4.0 2.0 140 chr3R 25861806 intron CG5890 + chr3R 25861876 intron CG5890 + chr3R 25861946 intron CG5890 + chr3R_10_25860001 chr3R_25860001 RAL-177 2424 chr3R 25927490 25927537 chr3R 25927592 25927639 13 100 2.5 3.0 2.8 3.4 149 chr3R 25927490 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927639 intron CCAP-R - chr3R_13_25925001 chr3R_25925001 RAL-177 2425 chr3R 26041177 26041181 chr3R 26041300 26041304 4 123 6.5 6.0 6.2 0.6 127 chr3R 26041177 intergenic E(spl)m8-HLH + chr3R 26041240 intergenic E(spl)m8-HLH +,gro + chr3R 26041304 intergenic E(spl)m8-HLH +,gro + chr3R_4_26040001 chr3R_26040001 RAL-177 2426 chr3R 26093825 26093875 chr3R 26093922 26093945 14 92 2.5 3.0 2.8 3.7 120 chr3R 26093825 intron dys - chr3R 26093885 intron dys - chr3R 26093945 intron dys - chr3R_14_26090001 chr3R_26090001 RAL-177 2427 chr3R 26126533 26126568 chr3R 26126639 26126674 12 103 5.5 9.0 7.2 1.5 141 chr3R 26126533 intron CG31324 + chr3R 26126604 intron CG31324 + chr3R 26126674 intron,5` UTR CG31324 +,CG14556 + chr3R_12_26125001 chr3R_26125001 RAL-177 2428 chr3R 26138867 26138911 chr3R 26139428 26139441 8 558 4.5 3.5 4.0 1.6 574 chr3R 26138867 intergenic not near genes chr3R 26139154 intergenic not near genes chr3R 26139441 intergenic not near genes chr3R_8_26135001 chr3R_26135001 RAL-177 2429 chr3R 26292087 26292136 chr3R 26292187 26292225 18 99 6.0 4.5 5.2 2.9 138 chr3R 26292087 intergenic not near genes chr3R 26292156 intergenic not near genes chr3R 26292225 intergenic not near genes chr3R_18_26290001 chr3R_26290001 RAL-177 2430 chr3R 26294703 26294742 chr3R 26294801 26294840 11 97 4.0 2.5 3.2 2.6 137 chr3R 26294703 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294840 intergenic not near genes chr3R_11_26290001 chr3R_26290001 RAL-177 2431 chr3R 26313428 26313462 chr3R 26313944 26313967 14 528 2.0 5.0 3.5 3.1 539 chr3R 26313428 intergenic not near genes chr3R 26313698 intergenic not near genes chr3R 26313967 intergenic not near genes chr3R_14_26310001 chr3R_26310001 RAL-177 2432 chr3R 26322265 26322296 chr3R 26322362 26322393 11 97 2.0 3.0 2.5 3.1 128 chr3R 26322265 intron CG33970 + chr3R 26322329 intron CG33970 + chr3R 26322393 intron CG33970 + chr3R_11_26320001 chr3R_26320001 RAL-177 2433 chr3R 26325347 26325358 chr3R 26325454 26325465 4 107 12.5 0.0 6.2 0.6 118 chr3R 26325347 intron CG33970 + chr3R 26325406 intron CG33970 + chr3R 26325465 intron CG33970 + chr3R_4_26325001 chr3R_26325001 RAL-177 2434 chr3R 26349250 26349266 chr3R 26349366 26349382 6 116 5.0 0.0 2.5 1.7 132 chr3R 26349250 intron CG33970 + chr3R 26349316 intron CG33970 + chr3R 26349382 intron CG33970 + chr3R_6_26345001 chr3R_26345001 RAL-177 2435 chr3R 26374818 26374856 chr3R 26374940 26374978 16 122 5.5 4.5 5.0 2.7 160 chr3R 26374818 intergenic not near genes chr3R 26374898 intergenic not near genes chr3R 26374978 intergenic not near genes chr3R_16_26370001 chr3R_26370001 RAL-177 2436 chr3R 26376305 26376353 chr3R 26385485 26385514 roo 19 9174 6.0 1.0 3.5 4.2 9209 chr3R 26376305 intergenic not near genes chr3R 26380910 intergenic not near genes chr3R 26385514 intergenic not near genes chr3R_19_26380001 chr3R_26380001 RAL-177 2437 chr3R 26405899 26405935 chr3R 26405995 26406031 12 95 2.0 1.0 1.5 4.8 132 chr3R 26405899 intergenic not near genes chr3R 26405965 intergenic not near genes chr3R 26406031 intergenic not near genes chr3R_12_26405001 chr3R_26405001 RAL-177 2438 chr3R 26434103 26434107 chr3R 26434204 26434208 4 101 4.0 14.0 9.0 0.4 105 chr3R 26434103 intergenic not near genes chr3R 26434156 intergenic not near genes chr3R 26434208 intergenic not near genes chr3R_4_26430001 chr3R_26430001 RAL-177 2439 chr3R 26444331 26444380 chr3R 26444428 26444478 12 98 2.5 3.0 2.8 3.2 147 chr3R 26444331 intron tx + chr3R 26444404 intron tx + chr3R 26444478 intron tx + chr3R_12_26440001 chr3R_26440001 RAL-177 2440 chr3R 26464937 26464982 chr3R 26465041 26465086 22 102 5.0 3.5 4.2 4.2 149 chr3R 26464937 intron CG5455 + chr3R 26465012 intron CG5455 + chr3R 26465086 intron CG5455 + chr3R_22_26465001 chr3R_26465001 RAL-177 2441 chr3R 26510503 26510533 chr3R 26519578 26519582 roo 9 9069 5.5 8.0 6.8 1.2 9079 chr3R 26510503 intron plum - chr3R 26515042 intron plum - chr3R 26519582 intron,5` UTR plum -,CR45226 + chr3R_9_26515001 chr3R_26515001 RAL-177 2442 chr3R 26558318 26558361 chr3R 26565645 26565673 Stalker4 13 7327 1.0 4.0 2.5 3.7 7355 chr3R 26558318 intron scrib + chr3R 26561996 intron scrib + chr3R 26565673 intron scrib + chr3R_13_26560001 chr3R_26560001 RAL-177 2443 chr3R 26641618 26641662 chr3R 26641725 26641740 12 102 4.5 6.0 5.2 1.9 122 chr3R 26641618 intergenic not near genes chr3R 26641679 intergenic not near genes chr3R 26641740 intergenic not near genes chr3R_12_26640001 chr3R_26640001 RAL-177 2444 chr3R 26642716 26642761 chr3R 26643126 26643175 jockey 10 412 3.5 5.5 4.5 1.8 459 chr3R 26642716 intergenic not near genes chr3R 26642946 intergenic not near genes chr3R 26643175 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-177 2445 chr3R 26659925 26659975 chr3R 26660046 26660096 14 120 4.5 1.0 2.8 3.7 171 chr3R 26659925 intron beat-VII - chr3R 26660010 intron beat-VII - chr3R 26660096 intron beat-VII - chr3R_14_26660001 chr3R_26660001 RAL-177 2446 chr3R 26685839 26685892 chr3R 26686036 26686067 20 193 4.0 4.5 4.2 3.8 228 chr3R 26685839 intergenic not near genes chr3R 26685953 intergenic not near genes chr3R 26686067 intergenic not near genes chr3R_20_26685001 chr3R_26685001 RAL-177 2447 chr3R 26688846 26688863 chr3R 26688944 26688960 9 98 6.5 5.0 5.8 1.3 114 chr3R 26688846 intergenic not near genes chr3R 26688903 intergenic not near genes chr3R 26688960 intergenic not near genes chr3R_9_26685001 chr3R_26685001 RAL-177 2448 chr3R 26755691 26755728 chr3R 26755787 26755824 8 96 4.5 4.5 4.5 1.5 133 chr3R 26755691 intergenic not near genes chr3R 26755758 intergenic not near genes chr3R 26755824 intergenic not near genes chr3R_8_26755001 chr3R_26755001 RAL-177 2449 chr3R 26789587 26789604 chr3R 26789686 26789703 8 98 1.0 0.0 0.5 5.3 116 chr3R 26789587 intergenic not near genes chr3R 26789645 intergenic not near genes chr3R 26789703 intergenic not near genes chr3R_8_26785001 chr3R_26785001 RAL-177 2450 chr3R 26810531 26810573 chr3R 26811036 26811073 roo 10 502 5.5 3.5 4.5 1.8 542 chr3R 26810531 intron Tl + chr3R 26810802 intron Tl + chr3R 26811073 intron Tl + chr3R_10_26810001 chr3R_26810001 RAL-177 2451 chr3R 26940964 26941018 chr3R 26941247 26941301 25 280 1.5 4.0 2.8 6.6 337 chr3R 26940964 intron sda + chr3R 26941132 intron sda + chr3R 26941301 intron sda + chr3R_25_26940001 chr3R_26940001 RAL-177 2452 chr3R 27027660 27027700 chr3R 27027764 27027802 7 103 5.0 2.5 3.8 1.5 142 chr3R 27027660 intron RYa-R + chr3R 27027731 intron RYa-R + chr3R 27027802 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-177 2453 chr3R 27028702 27028755 chr3R 27028801 27028854 25 99 3.5 4.0 3.8 5.2 152 chr3R 27028702 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028854 intron RYa-R + chr3R_25_27025001 chr3R_27025001 RAL-177 2454 chr3R 27091545 27091562 chr3R 27091644 27091661 9 99 7.0 0.5 3.8 1.9 116 chr3R 27091545 intergenic Cpr97Eb - chr3R 27091603 intergenic Cpr97Eb - chr3R 27091661 intergenic not near genes chr3R_9_27090001 chr3R_27090001 RAL-177 2455 chr3R 27133502 27133540 chr3R 27133639 27133677 16 137 3.0 4.0 3.5 3.6 175 chr3R 27133502 intron CG6051 - chr3R 27133590 intron CG6051 - chr3R 27133677 intron CG6051 - chr3R_16_27130001 chr3R_27130001 RAL-177 2456 chr3R 27140493 27140543 chr3R 27148123 27148173 412 20 7627 3.5 6.5 5.0 3.3 7680 chr3R 27140493 intron CG6051 - chr3R 27144333 intron CG6051 - chr3R 27148173 intron CG6051 - chr3R_20_27140001 chr3R_27140001 RAL-177 2457 chr3R 27329455 27329498 chr3R 27329552 27329559 21 95 6.5 4.5 5.5 3.2 104 chr3R 27329455 intergenic CG3330 - chr3R 27329507 intergenic CG3330 - chr3R 27329559 intergenic CG3330 - chr3R_21_27325001 chr3R_27325001 RAL-177 2458 chr3R 27335849 27335874 chr3R 27336301 27336336 7 459 2.0 2.5 2.2 2.2 487 chr3R 27335849 intergenic not near genes chr3R 27336092 intergenic not near genes chr3R 27336336 intergenic not near genes chr3R_7_27335001 chr3R_27335001 RAL-177 2459 chr3R 27342182 27342223 chr3R 27342324 27342361 6 141 2.5 4.0 3.2 1.4 179 chr3R 27342182 intron CG42534 + chr3R 27342272 intron CG42534 + chr3R 27342361 intron CG42534 + chr3R_6_27340001 chr3R_27340001 RAL-177 2460 chr3R 27342775 27342825 chr3R 27351376 27351418 Tirant 16 8598 2.0 4.5 3.2 3.8 8643 chr3R 27342775 intron CG42534 + chr3R 27347096 intron CG42534 + chr3R 27351418 intron CG42534 + chr3R_16_27345001 chr3R_27345001 RAL-177 2461 chr3R 27377453 27377471 chr3R 27377561 27377579 4 108 3.0 1.5 2.2 1.2 126 chr3R 27377453 3` UTR side - chr3R 27377516 3` UTR side - chr3R 27377579 3` UTR side - chr3R_4_27375001 chr3R_27375001 RAL-177 2462 chr3R 27492360 27492407 chr3R 27492467 27492514 18 105 3.0 2.0 2.5 5.1 154 chr3R 27492360 intergenic not near genes chr3R 27492437 intergenic not near genes chr3R 27492514 intergenic not near genes chr3R_18_27490001 chr3R_27490001 RAL-177 2463 chr3R 27496580 27496627 chr3R 27496701 27496738 5 121 2.0 5.0 3.5 1.1 158 chr3R 27496580 intergenic not near genes chr3R 27496659 intergenic not near genes chr3R 27496738 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-177 2464 chr3R 27521144 27521181 chr3R 27530373 27530410 roo 24 9229 10.5 9.5 10.0 2.2 9266 chr3R 27521144 intron CG12885 + chr3R 27525777 intron CG12885 + chr3R 27530410 intron CG12885 + chr3R_24_27525001 chr3R_27525001 RAL-177 2465 chr3R 27648570 27648605 chr3R 27648673 27648678 6 95 6.5 0.0 3.2 1.4 108 chr3R 27648570 intron tau - chr3R 27648624 intron tau - chr3R 27648678 intron tau - chr3R_6_27645001 chr3R_27645001 RAL-177 2466 chr3R 27648827 27648865 chr3R 27648924 27648931 11 92 5.5 3.5 4.5 2.0 104 chr3R 27648827 intron tau - chr3R 27648879 intron tau - chr3R 27648931 intron tau - chr3R_11_27645001 chr3R_27645001 RAL-177 2467 chr3R 27679919 27679971 chr3R 27680062 27680114 13 140 6.0 3.5 4.8 2.2 195 chr3R 27679919 exon CG12883 + chr3R 27680016 3` UTR CG12883 + chr3R 27680114 3` UTR CG12883 + chr3R_13_27680001 chr3R_27680001 RAL-177 2468 chr3R 27705336 27705385 chr3R 27705436 27705485 8 97 4.5 6.0 5.2 1.3 149 chr3R 27705336 exon CG12428 - chr3R 27705410 intron CG12428 - chr3R 27705485 exon CG12428 - chr3R_8_27705001 chr3R_27705001 RAL-177 2469 chr3R 27725552 27725591 chr3R 27731014 27731054 I-element 6 5462 6.0 0.0 3.0 1.5 5502 chr3R 27725552 intergenic not near genes chr3R 27728303 intergenic not near genes chr3R 27731054 intergenic not near genes chr3R_6_27725001 chr3R_27725001 RAL-177 2470 chr3R 27779249 27779285 chr3R 27779349 27779385 8 99 1.5 4.5 3.0 2.0 136 chr3R 27779249 exon CG34353 - chr3R 27779317 intron CG34353 - chr3R 27779385 intron CG34353 - chr3R_8_27775001 chr3R_27775001 RAL-177 2471 chr3R 27799935 27799959 chr3R 27800037 27800061 6 98 2.0 5.5 3.8 1.2 126 chr3R 27799935 intron CG34353 - chr3R 27799998 intron CG34353 - chr3R 27800061 intron CG34353 - chr3R_6_27795001 chr3R_27795001 RAL-177 2472 chr3R 27800689 27800718 chr3R 27800787 27800833 11 113 3.5 2.0 2.8 2.9 144 chr3R 27800689 intron CG34353 - chr3R 27800761 intron CG34353 - chr3R 27800833 intron CG34353 - chr3R_11_27800001 chr3R_27800001 RAL-177 2473 chr3R 27823663 27823687 chr3R 27823752 27823792 7 101 4.0 4.5 4.2 1.3 129 chr3R 27823663 intron CG34353 - chr3R 27823728 intron CG34353 - chr3R 27823792 intron CG34353 - chr3R_7_27820001 chr3R_27820001 RAL-177 2474 chr3R 27856741 27856787 chr3R 27858244 27858288 hopper2 12 1500 7.0 3.0 5.0 2.0 1547 chr3R 27856741 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858288 intron CG34353 - chr3R_12_27855001 chr3R_27855001 RAL-177 2475 chr3R 27862941 27862986 chr3R 27868265 27868311 Transpac 12 5318 2.5 6.0 4.2 2.3 5370 chr3R 27862941 intron CG34353 - chr3R 27865626 intron CG34353 - chr3R 27868311 intron CG34353 - chr3R_12_27865001 chr3R_27865001 RAL-177 2476 chr3R 27875688 27875729 chr3R 27882763 27882804 297 13 7075 3.0 4.5 3.8 2.7 7116 chr3R 27875688 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882804 intron CG34353 - chr3R_13_27875001 chr3R_27875001 RAL-177 2477 chr3R 27891514 27891548 chr3R 27891719 27891726 5 199 2.5 1.0 1.8 1.8 212 chr3R 27891514 intron CG34353 - chr3R 27891620 intron CG34353 - chr3R 27891726 intron CG34353 - chr3R_5_27890001 chr3R_27890001 RAL-177 2478 chr3R 28002891 28002926 chr3R 28002988 28003017 15 97 3.5 3.5 3.5 3.3 126 chr3R 28002891 intergenic not near genes chr3R 28002954 intergenic not near genes chr3R 28003017 intergenic not near genes chr3R_15_28000001 chr3R_28000001 RAL-177 2479 chr3R 28017932 28017982 chr3R 28018043 28018092 10 106 3.5 5.0 4.2 1.9 160 chr3R 28017932 intergenic not near genes chr3R 28018012 intergenic not near genes chr3R 28018092 intergenic not near genes chr3R_10_28015001 chr3R_28015001 RAL-177 2480 chr3R 28068486 28068523 chr3R 28073948 28073984 I-element 13 5460 0.0 5.5 2.8 3.4 5498 chr3R 28068486 intron CG34362 + chr3R 28071235 intron CG34362 + chr3R 28073984 intron CG34362 + chr3R_13_28070001 chr3R_28070001 RAL-177 2481 chr3R 28132473 28132522 chr3R 28132574 28132624 13 97 3.0 1.5 2.2 4.1 151 chr3R 28132473 intergenic not near genes chr3R 28132548 intergenic not near genes chr3R 28132624 intergenic not near genes chr3R_13_28130001 chr3R_28130001 RAL-177 2482 chr3R 28137667 28137718 chr3R 28137767 28137818 16 97 5.5 4.0 4.8 2.8 151 chr3R 28137667 intergenic not near genes chr3R 28137742 intergenic not near genes chr3R 28137818 intergenic not near genes chr3R_16_28135001 chr3R_28135001 RAL-177 2483 chr3R 28152327 28152360 chr3R 28152423 28152452 5 94 10.5 4.5 7.5 0.6 125 chr3R 28152327 intron CG34354 + chr3R 28152390 intron CG34354 + chr3R 28152452 intron CG34354 + chr3R_5_28150001 chr3R_28150001 RAL-177 2484 chr3R 28172851 28172864 chr3R 28173029 28173042 6 178 2.5 1.5 2.0 2.0 191 chr3R 28172851 intron CG34354 + chr3R 28172946 intron CG34354 + chr3R 28173042 intron CG34354 + chr3R_6_28170001 chr3R_28170001 RAL-177 2485 chr3R 28173651 28173697 chr3R 28181101 28181147 mdg1 12 7450 4.0 8.0 6.0 1.7 7496 chr3R 28173651 intron CG34354 + chr3R 28177399 intron CG34354 + chr3R 28181147 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-177 2486 chr3R 28253355 28253358 chr3R 28255855 28255883 jockey 4 2521 2.5 3.5 3.0 1.0 2528 chr3R 28253355 intergenic not near genes chr3R 28254619 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_4_28250001 chr3R_28250001 RAL-177 2487 chr3R 28286317 28286350 chr3R 28286420 28286458 6 102 3.0 5.5 4.2 1.2 141 chr3R 28286317 intergenic not near genes chr3R 28286388 intergenic not near genes chr3R 28286458 intergenic not near genes chr3R_6_28285001 chr3R_28285001 RAL-177 2488 chr3R 28302087 28302132 chr3R 28302546 28302591 jockey 19 459 7.5 9.0 8.2 2.1 504 chr3R 28302087 intergenic not near genes chr3R 28302339 intergenic not near genes chr3R 28302591 intergenic not near genes chr3R_19_28300001 chr3R_28300001 RAL-177 2489 chr3R 28331493 28331520 chr3R 28331592 28331619 18 98 9.5 6.5 8.0 2.0 126 chr3R 28331493 intron larp - chr3R 28331556 intron larp - chr3R 28331619 intron larp - chr3R_18_28330001 chr3R_28330001 RAL-177 2490 chr3R 28344090 28344093 chr3R 28344136 28344150 5 63 2.0 5.0 3.5 1.1 60 chr3R 28344090 exon Moca-cyp + chr3R 28344120 exon Moca-cyp + chr3R 28344150 exon Moca-cyp + chr3R_5_28340001 chr3R_28340001 RAL-177 2491 chr3R 28352499 28352539 chr3R 28352854 28352899 16 360 2.0 4.5 3.2 3.8 400 chr3R 28352499 exon Or98b + chr3R 28352699 exon Or98b + chr3R 28352899 exon Or98b + chr3R_16_28350001 chr3R_28350001 RAL-177 2492 chr3R 28358839 28358891 chr3R 28359199 28359241 17 355 4.5 3.0 3.8 3.5 402 chr3R 28358839 intergenic not near genes chr3R 28359040 intergenic not near genes chr3R 28359241 intergenic not near genes chr3R_17_28355001 chr3R_28355001 RAL-177 2493 chr3R 28390104 28390146 chr3R 28390190 28390229 17 93 4.0 3.0 3.5 3.8 125 chr3R 28390104 intergenic not near genes chr3R 28390166 intergenic not near genes chr3R 28390229 intergenic not near genes chr3R_17_28390001 chr3R_28390001 RAL-177 2494 chr3R 28393684 28393729 chr3R 28393804 28393849 15 120 2.0 6.0 4.0 3.0 165 chr3R 28393684 intergenic not near genes chr3R 28393766 intergenic not near genes chr3R 28393849 intergenic not near genes chr3R_15_28390001 chr3R_28390001 RAL-177 2495 chr3R 28407694 28407732 chr3R 28407800 28407838 16 105 4.5 5.5 5.0 2.7 144 chr3R 28407694 intergenic not near genes chr3R 28407766 intergenic not near genes chr3R 28407838 intergenic not near genes chr3R_16_28405001 chr3R_28405001 RAL-177 2496 chr3R 28465280 28465331 chr3R 28465416 28465440 11 134 5.5 8.5 7.0 1.4 160 chr3R 28465280 intron beat-VI + chr3R 28465360 intron beat-VI + chr3R 28465440 intron beat-VI + chr3R_11_28465001 chr3R_28465001 RAL-177 2497 chr3R 28479137 28479167 chr3R 28479240 28479260 15 101 3.5 6.0 4.8 2.6 123 chr3R 28479137 intergenic not near genes chr3R 28479198 intergenic not near genes chr3R 28479260 intergenic not near genes chr3R_15_28475001 chr3R_28475001 RAL-177 2498 chr3R 28480310 28480331 chr3R 28480411 28480432 9 101 2.5 7.0 4.8 1.6 122 chr3R 28480310 intergenic not near genes chr3R 28480371 intergenic not near genes chr3R 28480432 intergenic not near genes chr3R_9_28480001 chr3R_28480001 RAL-177 2499 chr3R 28484353 28484394 chr3R 28486250 28486291 59 1900 77.0 98.5 87.8 0.7 1938 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486291 intergenic CG1894 + chr3R_59_28485001 chr3R_28485001 RAL-177 2500 chr3R 28625458 28625481 chr3R 28625569 28625579 4 107 9.5 3.0 6.2 0.6 121 chr3R 28625458 intron CG10011 - chr3R 28625518 intron CG10011 - chr3R 28625579 intron CG10011 - chr3R_4_28625001 chr3R_28625001 RAL-177 2501 chr3R 28625482 28625500 chr3R 28625568 28625611 6 106 6.0 3.0 4.5 1.1 129 chr3R 28625482 intron CG10011 - chr3R 28625546 intron CG10011 - chr3R 28625611 intron CG10011 - chr3R_6_28625001 chr3R_28625001 RAL-177 2502 chr3R 28670604 28670648 chr3R 28670710 28670754 13 104 0.5 3.0 1.8 4.6 150 chr3R 28670604 intergenic CG9989 +,CG33346 + chr3R 28670679 intergenic CG9989 +,CG33346 + chr3R 28670754 exon CG9989 + chr3R_13_28670001 chr3R_28670001 RAL-177 2503 chr3R 28702910 28702964 chr3R 28703014 28703060 22 101 3.0 6.5 4.8 3.8 150 chr3R 28702910 intron htt + chr3R 28702985 intron htt + chr3R 28703060 intron htt + chr3R_22_28700001 chr3R_28700001 RAL-177 2504 chr3R 28753284 28753333 chr3R 28755107 28755156 17 1822 3.5 6.5 5.0 2.8 1872 chr3R 28753284 intergenic not near genes chr3R 28754220 intergenic not near genes chr3R 28755156 intergenic CG9997 - chr3R_17_28750001 chr3R_28750001 RAL-177 2505 chr3R 28758271 28758285 chr3R 28763908 28763922 roo 5 5637 8.5 0.0 4.2 1.0 5651 chr3R 28758271 intergenic aqrs - chr3R 28761096 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-177 2506 chr3R 28758302 28758319 chr3R 28771329 28771346 Stalker4 5 13027 2.0 5.0 3.5 1.1 13044 chr3R 28758302 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771346 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-177 2507 chr3R 28763900 28763917 chr3R 28771363 28771380 Stalker4 8 7463 0.5 11.0 5.8 1.2 7480 chr3R 28763900 intergenic not near genes chr3R 28767640 intergenic not near genes chr3R 28771380 intergenic not near genes chr3R_8_28765001 chr3R_28765001 RAL-177 2508 chr3R 28785375 28785405 chr3R 28785470 28785510 9 104 4.5 4.0 4.2 1.7 135 chr3R 28785375 intergenic not near genes chr3R 28785442 intergenic not near genes chr3R 28785510 intergenic not near genes chr3R_9_28785001 chr3R_28785001 RAL-177 2509 chr3R 28792858 28792879 chr3R 28797968 28797981 jockey 4 5108 10.0 5.0 7.5 0.5 5123 chr3R 28792858 intergenic not near genes chr3R 28795420 intergenic not near genes chr3R 28797981 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-177 2510 chr3R 28792882 28792899 chr3R 28797967 28798014 jockey 6 5102 5.0 5.0 5.0 1.0 5132 chr3R 28792882 intergenic not near genes chr3R 28795448 intergenic not near genes chr3R 28798014 intergenic not near genes chr3R_6_28795001 chr3R_28795001 RAL-177 2511 chr3R 28811552 28811604 chr3R 28811718 28811770 21 166 6.5 3.5 5.0 3.5 218 chr3R 28811552 intergenic wdn - chr3R 28811661 intergenic wdn -,CG1646 + chr3R 28811770 intergenic CG1646 +,wdn - chr3R_21_28810001 chr3R_28810001 RAL-177 2512 chr3R 28830869 28830918 chr3R 28830967 28831016 15 98 7.5 4.0 5.8 2.2 147 chr3R 28830869 intron WASp - chr3R 28830942 intron WASp - chr3R 28831016 intron WASp - chr3R_15_28830001 chr3R_28830001 RAL-177 2513 chr3R 21907534 21907536 chr3R 28831799 28831802 25 6924267 13.0 15.5 14.2 1.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_25_25365001 chr3R_25365001 RAL-177 2514 chr3R 28862127 28862173 chr3R 28862224 28862270 12 95 2.5 6.0 4.2 2.3 143 chr3R 28862127 intron spg + chr3R 28862198 intron spg + chr3R 28862270 intron spg + chr3R_12_28860001 chr3R_28860001 RAL-177 2515 chr3R 28938473 28938511 chr3R 28938595 28938624 7 120 8.5 0.0 4.2 1.3 151 chr3R 28938473 intron CG14521 - chr3R 28938548 intron CG14521 - chr3R 28938624 intron CG14521 - chr3R_7_28935001 chr3R_28935001 RAL-177 2516 chr3R 28947951 28947999 chr3R 28948083 28948131 12 131 2.0 4.5 3.2 2.9 180 chr3R 28947951 intron CG14521 - chr3R 28948041 intron CG14521 - chr3R 28948131 intron CG14521 - chr3R_12_28945001 chr3R_28945001 RAL-177 2517 chr3R 28968394 28968448 chr3R 28968491 28968545 20 97 3.0 4.5 3.8 4.2 151 chr3R 28968394 intron CG14521 - chr3R 28968470 intron CG14521 - chr3R 28968545 intron CG14521 - chr3R_20_28965001 chr3R_28965001 RAL-177 2518 chr3R 28998966 28999020 chr3R 28999078 28999081 7 102 2.0 5.0 3.5 1.6 115 chr3R 28998966 intron wat - chr3R 28999024 intron wat - chr3R 28999081 intron wat - chr3R_7_28995001 chr3R_28995001 RAL-177 2519 chr3R 29008896 29008931 chr3R 29009014 29009065 6 124 3.0 3.5 3.2 1.4 169 chr3R 29008896 intron wat - chr3R 29008980 intron wat - chr3R 29009065 intron wat - chr3R_6_29005001 chr3R_29005001 RAL-177 2520 chr3R 29032732 29032769 chr3R 29032829 29032839 8 90 7.5 4.5 6.0 1.1 107 chr3R 29032732 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032786 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032839 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_8_29030001 chr3R_29030001 RAL-177 2521 chr3R 29079383 29079409 chr3R 29080775 29080801 NOF 6 1389 0.5 5.5 3.0 1.5 1418 chr3R 29079383 intron CG11873 + chr3R 29080092 intron CG11873 + chr3R 29080801 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-177 2522 chr3R 29129777 29129816 chr3R 29130151 29130195 8 384 37.0 25.0 31.0 0.2 418 chr3R 29129777 exon dgt6 - chr3R 29129986 intron dgt6 - chr3R 29130195 exon dgt6 - chr3R_8_29125001 chr3R_29125001 RAL-177 2523 chr3R 29203834 29203851 chr3R 29203928 29203951 6 97 9.0 0.0 4.5 1.1 117 chr3R 29203834 5` UTR CG14508 - chr3R 29203892 intron CG14508 - chr3R 29203951 intron CG14508 - chr3R_6_29200001 chr3R_29200001 RAL-177 2524 chr3R 29213040 29213090 chr3R 29213143 29213193 25 103 4.5 4.0 4.2 4.8 153 chr3R 29213040 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213193 intergenic not near genes chr3R_25_29210001 chr3R_29210001 RAL-177 2525 chr3R 29237238 29237282 chr3R 29239279 29239291 11 2033 16.0 5.5 10.8 0.9 2053 chr3R 29237238 exon CG11951 - chr3R 29238264 intron CG11951 - chr3R 29239291 exon CG31427 - chr3R_11_29235001 chr3R_29235001 RAL-177 2526 chr3R 29239219 29239243 chr3R 29245518 29245537 9 6295 3.0 15.0 9.0 0.9 6318 chr3R 29239219 exon CG31427 - chr3R 29242378 exon CG31445 - chr3R 29245537 exon SP1029 - chr3R_9_29240001 chr3R_29240001 RAL-177 2527 chr3R 29240450 29240503 chr3R 29240554 29240607 17 104 6.5 7.5 7.0 2.1 157 chr3R 29240450 intergenic CG31427 -,CG31445 - chr3R 29240528 intergenic CG31445 -,CG31427 - chr3R 29240607 3` UTR CG31445 - chr3R_17_29240001 chr3R_29240001 RAL-177 2528 chr3R 29294884 29294941 chr3R 29294981 29294991 13 82 4.5 6.5 5.5 2.0 107 chr3R 29294884 3` UTR CG14506 - chr3R 29294938 3` UTR CG14506 - chr3R 29294991 3` UTR CG14506 - chr3R_13_29290001 chr3R_29290001 RAL-177 2529 chr3R 29319808 29319854 chr3R 29320147 29320190 jockey 13 336 7.0 5.5 6.2 1.8 382 chr3R 29319808 intergenic Cnx99A - chr3R 29319999 intergenic Cnx99A - chr3R 29320190 intergenic not near genes chr3R_13_29315001 chr3R_29315001 RAL-177 2530 chr3R 29355941 29355989 chr3R 29356038 29356089 13 99 3.5 5.5 4.5 2.4 148 chr3R 29355941 intergenic CR45547 - chr3R 29356015 intergenic CR45547 - chr3R 29356089 intergenic CR45547 - chr3R_13_29355001 chr3R_29355001 RAL-177 2531 chr3R 29389476 29389513 chr3R 29389561 29389613 14 86 1.5 2.5 2.0 4.7 137 chr3R 29389476 intron Ptp99A + chr3R 29389544 intron Ptp99A + chr3R 29389613 intron Ptp99A + chr3R_14_29385001 chr3R_29385001 RAL-177 2532 chr3R 29406614 29406642 chr3R 29407920 29407948 jockey 7 1306 1.0 5.0 3.0 1.8 1334 chr3R 29406614 intron Ptp99A + chr3R 29407281 intron Ptp99A + chr3R 29407948 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 RAL-177 2533 chr3R 29429771 29429803 chr3R 29429869 29429869 6 91 0.5 3.5 2.0 2.0 98 chr3R 29429771 intron Ptp99A + chr3R 29429820 intron Ptp99A + chr3R 29429869 intron Ptp99A + chr3R_6_29425001 chr3R_29425001 RAL-177 2534 chr3R 29471990 29472039 chr3R 29472103 29472147 8 110 2.5 2.0 2.2 2.5 157 chr3R 29471990 intron Ptp99A + chr3R 29472068 intron Ptp99A + chr3R 29472147 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-177 2535 chr3R 29474417 29474460 chr3R 29474524 29474567 23 106 5.0 10.0 7.5 2.7 150 chr3R 29474417 intron Ptp99A + chr3R 29474492 intron Ptp99A + chr3R 29474567 intron Ptp99A + chr3R_23_29470001 chr3R_29470001 RAL-177 2536 chr3R 29522271 29522298 chr3R 29524886 29524913 10 2615 3.5 18.5 11.0 0.8 2642 chr3R 29522271 intergenic not near genes chr3R 29523592 intergenic not near genes chr3R 29524913 intergenic not near genes chr3R_10_29520001 chr3R_29520001 RAL-177 2537 chr3R 29539411 29539444 chr3R 29539507 29539537 6 91 6.0 0.0 3.0 1.5 126 chr3R 29539411 intergenic not near genes chr3R 29539474 intergenic not near genes chr3R 29539537 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-177 2538 chr3R 29550245 29550251 chr3R 29550346 29550352 4 101 10.0 5.0 7.5 0.5 107 chr3R 29550245 intergenic not near genes chr3R 29550298 intergenic not near genes chr3R 29550352 intergenic not near genes chr3R_4_29550001 chr3R_29550001 RAL-177 2539 chr3R 29581531 29581560 chr3R 29581632 29581661 12 101 3.0 9.0 6.0 1.7 130 chr3R 29581531 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581661 intergenic not near genes chr3R_12_29580001 chr3R_29580001 RAL-177 2540 chr3R 29655635 29655669 chr3R 29655734 29655768 12 99 4.0 2.0 3.0 3.0 133 chr3R 29655635 intron Dop1R2 - chr3R 29655702 intron Dop1R2 - chr3R 29655768 intron Dop1R2 - chr3R_12_29655001 chr3R_29655001 RAL-177 2541 chr3R 29656387 29656405 chr3R 29656486 29656504 6 99 2.0 5.5 3.8 1.2 117 chr3R 29656387 intron Dop1R2 - chr3R 29656446 intron Dop1R2 - chr3R 29656504 intron Dop1R2 - chr3R_6_29655001 chr3R_29655001 RAL-177 2542 chr3R 29702131 29702167 chr3R 29702232 29702270 11 102 5.0 0.0 2.5 3.1 139 chr3R 29702131 intergenic not near genes chr3R 29702200 intergenic not near genes chr3R 29702270 intergenic not near genes chr3R_11_29700001 chr3R_29700001 RAL-177 2543 chr3R 29717443 29717472 chr3R 29717555 29717594 7 120 4.5 6.5 5.5 1.1 151 chr3R 29717443 intergenic not near genes chr3R 29717518 intergenic not near genes chr3R 29717594 intergenic not near genes chr3R_7_29715001 chr3R_29715001 RAL-177 2544 chr3R 29738284 29738300 chr3R 29739772 29739784 hobo 5 1487 1.5 3.0 2.2 1.6 1500 chr3R 29738284 5` UTR CG1969 + chr3R 29739034 intron CG1969 + chr3R 29739784 5` UTR CG1969 + chr3R_5_29735001 chr3R_29735001 RAL-177 2545 chr3R 29754948 29754987 chr3R 29755046 29755084 6 97 0.0 5.0 2.5 1.7 136 chr3R 29754948 intergenic CR44953 -,yata + chr3R 29755016 intergenic CR44953 -,yata + chr3R 29755084 intergenic CR44953 - chr3R_6_29755001 chr3R_29755001 RAL-177 2546 chr3R 29758924 29758971 chr3R 29759022 29759069 17 96 2.5 8.5 5.5 2.6 145 chr3R 29758924 3` UTR CR44953 - chr3R 29758996 3` UTR CR44953 - chr3R 29759069 intergenic CR44953 - chr3R_17_29755001 chr3R_29755001 RAL-177 2547 chr3R 29760342 29760388 chr3R 29761563 29761609 pogo 16 1220 8.0 3.0 5.5 2.5 1267 chr3R 29760342 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761609 intergenic not near genes chr3R_16_29760001 chr3R_29760001 RAL-177 2548 chr3R 29768456 29768602 chr3R 29768568 29768698 15 105 0.5 0.5 0.5 10.0 242 chr3R 29768456 intron kay + chr3R 29768577 intron kay + chr3R 29768698 intron kay + chr3R_15_29765001 chr3R_29765001 RAL-177 2549 chr3R 29777185 29777217 chr3R 29777308 29777316 11 120 1.0 3.5 2.2 3.4 131 chr3R 29777185 intron kay + chr3R 29777250 intron kay + chr3R 29777316 intron kay + chr3R_11_29775001 chr3R_29775001 RAL-177 2550 chr3R 29826695 29826749 chr3R 29826809 29826839 15 107 3.5 5.5 4.5 2.7 144 chr3R 29826695 intergenic not near genes chr3R 29826767 intergenic not near genes chr3R 29826839 intergenic Atg16 - chr3R_15_29825001 chr3R_29825001 RAL-177 2551 chr3R 29870395 29870451 chr3R 29870515 29870571 8 119 5.0 3.5 4.2 1.5 176 chr3R 29870395 intron CG34133 + chr3R 29870483 intron CG34133 + chr3R 29870571 intron CG34133 + chr3R_8_29870001 chr3R_29870001 RAL-177 2552 chr3R 29882000 29882050 chr3R 29891177 29891218 roo 16 9176 4.0 3.0 3.5 3.6 9218 chr3R 29882000 intron CG31038 + chr3R 29886609 intron CG31038 + chr3R 29891218 intron CG31038 + chr3R_16_29885001 chr3R_29885001 RAL-177 2553 chr3R 29923610 29923659 chr3R 29925437 29925486 18 1830 41.5 35.0 38.2 0.5 1876 chr3R 29923610 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924548 exon Jon99Cii - chr3R 29925486 exon Jon99Ci - chr3R_18_29920001 chr3R_29920001 RAL-177 2554 chr3R 29950554 29950592 chr3R 29950651 29950669 10 91 3.5 6.0 4.8 1.7 115 chr3R 29950554 intergenic TkR99D - chr3R 29950612 intergenic TkR99D - chr3R 29950669 intergenic TkR99D - chr3R_10_29950001 chr3R_29950001 RAL-177 2555 chr3R 29963470 29963512 chr3R 29963579 29963616 17 116 3.0 5.0 4.0 3.4 146 chr3R 29963470 intron TkR99D - chr3R 29963543 intron TkR99D - chr3R 29963616 intron TkR99D - chr3R_17_29960001 chr3R_29960001 RAL-177 2556 chr3R 29969112 29969148 chr3R 29969435 29969471 7 321 2.5 2.5 2.5 2.0 359 chr3R 29969112 5` UTR TkR99D - chr3R 29969292 5` UTR TkR99D - chr3R 29969471 intergenic TkR99D - chr3R_7_29965001 chr3R_29965001 RAL-177 2557 chr3R 30025300 30025314 chr3R 30025396 30025410 12 96 4.0 15.5 9.8 1.1 110 chr3R 30025300 intron Axn + chr3R 30025355 intron Axn + chr3R 30025410 intron Axn + chr3R_12_30025001 chr3R_30025001 RAL-177 2558 chr3R 30032145 30032156 chr3R 30032244 30032255 5 98 10.0 7.0 8.5 0.5 110 chr3R 30032145 intron Axn + chr3R 30032200 intron Axn + chr3R 30032255 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-177 2559 chr3R 30075565 30075589 chr3R 30075674 30075698 10 109 3.5 8.0 5.8 1.5 133 chr3R 30075565 intron sima + chr3R 30075632 intron sima + chr3R 30075698 intron sima + chr3R_10_30075001 chr3R_30075001 RAL-177 2560 chr3R 30082977 30083014 chr3R 30083066 30083110 5 91 2.0 2.5 2.2 1.6 133 chr3R 30082977 intron sima + chr3R 30083044 intron sima + chr3R 30083110 intron sima + chr3R_5_30080001 chr3R_30080001 RAL-177 2561 chr3R 30084842 30084863 chr3R 30086329 30086350 hobo 5 1486 3.0 4.0 3.5 1.1 1508 chr3R 30084842 intron sima + chr3R 30085596 intron sima + chr3R 30086350 intron sima + chr3R_5_30085001 chr3R_30085001 RAL-177 2562 chr3R 30098279 30098322 chr3R 30098382 30098416 6 93 1.5 1.0 1.2 2.7 137 chr3R 30098279 intron sima + chr3R 30098348 intron sima + chr3R 30098416 intron sima + chr3R_6_30095001 chr3R_30095001 RAL-177 2563 chr3R 30099046 30099074 chr3R 30099146 30099174 6 98 7.0 3.5 5.2 1.0 128 chr3R 30099046 intron sima + chr3R 30099110 intron sima + chr3R 30099174 intron sima + chr3R_6_30095001 chr3R_30095001 RAL-177 2564 chr3R 30164396 30164433 chr3R 30164517 30164562 14 128 2.0 6.5 4.2 2.7 166 chr3R 30164396 intergenic CG31030 - chr3R 30164479 intergenic CG31030 - chr3R 30164562 intergenic CG31030 - chr3R_14_30160001 chr3R_30160001 RAL-177 2565 chr3R 30210662 30210669 chr3R 30210762 30210768 4 100 0.0 12.5 6.2 0.6 106 chr3R 30210662 intergenic CecA1 +,Anp + chr3R 30210715 intergenic CecA1 +,Anp + chr3R 30210768 intergenic CecA1 +,Anp + chr3R_4_30210001 chr3R_30210001 RAL-177 2566 chr3R 30212645 30212652 chr3R 30212744 30212751 4 99 2.0 2.5 2.2 1.2 106 chr3R 30212645 intergenic CecA2 + chr3R 30212698 intergenic CecA2 + chr3R 30212751 intergenic CecA2 + chr3R_4_30210001 chr3R_30210001 RAL-177 2567 chr3R 30238746 30238794 chr3R 30239930 30239977 1360 10 1180 6.0 9.5 7.8 1.1 1231 chr3R 30238746 intergenic not near genes chr3R 30239362 intergenic not near genes chr3R 30239977 intergenic not near genes chr3R_10_30235001 chr3R_30235001 RAL-177 2568 chr3R 30246307 30246317 chr3R 30246406 30246416 4 99 0.5 3.5 2.0 1.3 109 chr3R 30246307 intron CG9733 - chr3R 30246362 intron CG9733 - chr3R 30246416 intron CG9733 - chr3R_4_30245001 chr3R_30245001 RAL-177 2569 chr3R 30246318 30246332 chr3R 30246385 30246431 4 91 0.5 2.0 1.2 1.8 113 chr3R 30246318 intron CG9733 - chr3R 30246374 intron CG9733 - chr3R 30246431 intron CG9733 - chr3R_4_30245001 chr3R_30245001 RAL-177 2570 chr3R 30260345 30260397 chr3R 30260441 30260493 18 95 4.0 6.5 5.2 2.9 148 chr3R 30260345 intergenic not near genes chr3R 30260419 intergenic not near genes chr3R 30260493 intergenic not near genes chr3R_18_30260001 chr3R_30260001 RAL-177 2571 chr3R 30267957 30267999 chr3R 30268063 30268075 4 92 3.0 5.0 4.0 0.8 118 chr3R 30267957 intergenic not near genes chr3R 30268016 intergenic not near genes chr3R 30268075 intergenic not near genes chr3R_4_30265001 chr3R_30265001 RAL-177 2572 chr3R 30317329 30317357 chr3R 30324941 30324968 roo 5 7609 1.5 4.0 2.8 1.3 7639 chr3R 30317329 intron hdc + chr3R 30321148 intron hdc + chr3R 30324968 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-177 2573 chr3R 30330486 30330523 chr3R 30330569 30330617 4 91 6.5 6.5 6.5 0.5 131 chr3R 30330486 intron hdc + chr3R 30330552 intron hdc + chr3R 30330617 intron hdc + chr3R_4_30330001 chr3R_30330001 RAL-177 2574 chr3R 30335944 30335970 chr3R 30336211 30336247 10 275 6.0 0.0 3.0 2.5 303 chr3R 30335944 intron hdc + chr3R 30336096 intron hdc + chr3R 30336247 intron hdc + chr3R_10_30335001 chr3R_30335001 RAL-177 2575 chr3R 30375528 30375572 chr3R 30383171 30383215 412 14 7643 4.5 3.0 3.8 2.9 7687 chr3R 30375528 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383215 intergenic not near genes chr3R_14_30375001 chr3R_30375001 RAL-177 2576 chr3R 30396196 30396241 chr3R 30404482 30404527 roo 11 8284 5.0 5.5 5.2 1.8 8331 chr3R 30396196 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404527 5` UTR CR45570 + chr3R_11_30400001 chr3R_30400001 RAL-177 2577 chr3R 30444034 30444078 chr3R 30444138 30444182 20 103 2.5 2.0 2.2 6.2 148 chr3R 30444034 intergenic Osi23 -,CG15537 - chr3R 30444108 3` UTR Osi23 - chr3R 30444182 exon Osi23 - chr3R_20_30440001 chr3R_30440001 RAL-177 2578 chr3R 30452143 30452156 chr3R 30452283 30452285 4 137 9.5 4.0 6.8 0.5 142 chr3R 30452143 intron aralar1 - chr3R 30452214 intron aralar1 - chr3R 30452285 intron aralar1 - chr3R_4_30450001 chr3R_30450001 RAL-177 2579 chr3R 30452163 30452178 chr3R 30452276 30452287 5 120 5.0 3.0 4.0 1.0 124 chr3R 30452163 intron aralar1 - chr3R 30452225 intron aralar1 - chr3R 30452287 intron aralar1 - chr3R_5_30450001 chr3R_30450001 RAL-177 2580 chr3R 30480463 30480489 chr3R 30482951 30482977 jockey 5 2486 6.5 9.5 8.0 0.6 2514 chr3R 30480463 intron PH4alphaEFB + chr3R 30481720 intron PH4alphaEFB + chr3R 30482977 intron PH4alphaEFB + chr3R_5_30480001 chr3R_30480001 RAL-177 2581 chr3R 30480493 30480511 chr3R 30482949 30482999 jockey 11 2484 1.5 9.5 5.5 1.7 2506 chr3R 30480493 intron PH4alphaEFB + chr3R 30481746 intron PH4alphaEFB + chr3R 30482999 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 RAL-177 2582 chr3R 30488104 30488118 chr3R 30488203 30488217 11 99 4.5 0.0 2.2 3.4 113 chr3R 30488104 intergenic Jon99Fii - chr3R 30488160 intergenic Jon99Fii - chr3R 30488217 intergenic Jon99Fii - chr3R_11_30485001 chr3R_30485001 RAL-177 2583 chr3R 30498400 30498434 chr3R 30498615 30498653 9 219 0.0 7.0 3.5 2.0 253 chr3R 30498400 intron PH4alphaNE1 - chr3R 30498526 intron PH4alphaNE1 - chr3R 30498653 intron PH4alphaNE1 - chr3R_9_30495001 chr3R_30495001 RAL-177 2584 chr3R 30627591 30627633 chr3R 30627691 30627719 10 96 3.5 5.5 4.5 1.8 128 chr3R 30627591 3` UTR CG2267 - chr3R 30627655 exon CG2267 - chr3R 30627719 exon CG2267 - chr3R_10_30625001 chr3R_30625001 RAL-177 2585 chr3R 30642732 30642776 chr3R 30642936 30642978 11 202 3.5 1.5 2.5 3.1 246 chr3R 30642732 intergenic not near genes chr3R 30642855 intergenic not near genes chr3R 30642978 intergenic not near genes chr3R_11_30640001 chr3R_30640001 RAL-177 2586 chr3R 30679511 30679550 chr3R 30687000 30687039 blood 7 7488 1.5 8.0 4.8 1.2 7528 chr3R 30679511 intergenic not near genes chr3R 30683275 intergenic not near genes chr3R 30687039 intergenic not near genes chr3R_7_30680001 chr3R_30680001 RAL-177 2587 chr3R 30700848 30700856 chr3R 30700991 30700999 4 143 5.5 1.0 3.2 1.0 151 chr3R 30700848 intergenic not near genes chr3R 30700924 intergenic not near genes chr3R 30700999 intergenic not near genes chr3R_4_30700001 chr3R_30700001 RAL-177 2588 chr3R 30718629 30718679 chr3R 30718731 30718781 14 98 6.0 4.0 5.0 2.3 152 chr3R 30718629 intergenic not near genes chr3R 30718705 intergenic not near genes chr3R 30718781 intergenic not near genes chr3R_14_30715001 chr3R_30715001 RAL-177 2589 chr3R 30749601 30749618 chr3R 30750103 30750120 8 500 7.0 10.0 8.5 0.8 519 chr3R 30749601 intergenic not near genes chr3R 30749860 intergenic not near genes chr3R 30750120 intergenic not near genes chr3R_8_30745001 chr3R_30745001 RAL-177 2590 chr3R 30749621 30749630 chr3R 30750085 30750117 5 490 4.0 5.5 4.8 0.9 496 chr3R 30749621 intergenic not near genes chr3R 30749869 intergenic not near genes chr3R 30750117 intergenic not near genes chr3R_5_30745001 chr3R_30745001 RAL-177 2591 chr3R 30761331 30761366 chr3R 30761433 30761468 4 102 2.5 6.5 4.5 0.7 137 chr3R 30761331 intergenic not near genes chr3R 30761400 intergenic not near genes chr3R 30761468 intergenic not near genes chr3R_4_30760001 chr3R_30760001 RAL-177 2592 chr3R 30774732 30774762 chr3R 30774982 30775012 5 250 6.5 3.0 4.8 0.9 280 chr3R 30774732 intron zfh1 + chr3R 30774872 intron zfh1 + chr3R 30775012 intron zfh1 + chr3R_5_30770001 chr3R_30770001 RAL-177 2593 chr3R 30818791 30818841 chr3R 30820376 30820426 1360 26 1584 7.5 6.0 6.8 3.3 1635 chr3R 30818791 intron cindr + chr3R 30819608 intron cindr + chr3R 30820426 intron cindr + chr3R_26_30815001 chr3R_30815001 RAL-177 2594 chr3R 30821409 30821418 chr3R 30821516 30821525 7 107 1.5 8.5 5.0 1.2 116 chr3R 30821409 intron cindr + chr3R 30821467 intron cindr + chr3R 30821525 intron cindr + chr3R_7_30820001 chr3R_30820001 RAL-177 2595 chr3R 30826614 30826654 chr3R 30830831 30830871 12 4220 36.5 31.0 33.8 0.3 4257 chr3R 30826614 3` UTR cindr + chr3R 30828742 intron CG15544 + chr3R 30830871 intron CG15544 + chr3R_12_30825001 chr3R_30825001 RAL-177 2596 chr3R 30850220 30850269 chr3R 30850332 30850381 13 112 5.0 6.5 5.8 1.9 161 chr3R 30850220 intergenic not near genes chr3R 30850300 intergenic not near genes chr3R 30850381 intergenic not near genes chr3R_13_30850001 chr3R_30850001 RAL-177 2597 chr3R 30948058 30948103 chr3R 30948269 30948309 9 210 4.5 1.5 3.0 2.2 251 chr3R 30948058 intergenic not near genes chr3R 30948184 intergenic not near genes chr3R 30948309 intergenic not near genes chr3R_9_30945001 chr3R_30945001 RAL-177 2598 chr3R 30973112 30973159 chr3R 30973293 30973340 14 180 4.0 3.0 3.5 3.1 228 chr3R 30973112 intron 5-HT7 - chr3R 30973226 intron 5-HT7 - chr3R 30973340 intron 5-HT7 - chr3R_14_30970001 chr3R_30970001 RAL-177 2599 chr3R 30996626 30996645 chr3R 30996865 30996889 4 243 12.0 5.0 8.5 0.4 263 chr3R 30996626 intron 5-HT7 - chr3R 30996758 intron 5-HT7 - chr3R 30996889 intron 5-HT7 - chr3R_4_30995001 chr3R_30995001 RAL-177 2600 chr3R 30996651 30996664 chr3R 30996864 30996878 4 229 7.5 5.0 6.2 0.6 227 chr3R 30996651 intron 5-HT7 - chr3R 30996764 intron 5-HT7 - chr3R 30996878 intron 5-HT7 - chr3R_4_30995001 chr3R_30995001 RAL-177 2601 chr3R 31026469 31026519 chr3R 31026570 31026620 12 101 4.0 1.5 2.8 3.2 151 chr3R 31026469 intergenic not near genes chr3R 31026544 intergenic not near genes chr3R 31026620 intergenic not near genes chr3R_12_31025001 chr3R_31025001 RAL-177 2602 chr3R 31042102 31042144 chr3R 31042199 31042251 18 106 4.0 4.0 4.0 3.6 149 chr3R 31042102 intron CanA1 + chr3R 31042176 intron CanA1 + chr3R 31042251 intron CanA1 + chr3R_18_31040001 chr3R_31040001 RAL-177 2603 chr3R 31069626 31069677 chr3R 31069741 31069792 15 115 6.0 2.5 4.2 2.9 166 chr3R 31069626 intron Sox100B + chr3R 31069709 intron Sox100B + chr3R 31069792 intron Sox100B + chr3R_15_31065001 chr3R_31065001 RAL-177 2604 chr3R 31074226 31074259 chr3R 31081837 31081877 springer 6 7617 8.0 6.5 7.2 0.7 7651 chr3R 31074226 intron Sox100B + chr3R 31078052 intron Sox100B + chr3R 31081877 intron Sox100B + chr3R_6_31075001 chr3R_31075001 RAL-177 2605 chr3R 31090601 31090650 chr3R 31090706 31090750 14 104 1.5 2.0 1.8 5.0 149 chr3R 31090601 intergenic CG11317 - chr3R 31090676 intergenic CG11317 - chr3R 31090750 3` UTR CG11317 - chr3R_14_31090001 chr3R_31090001 RAL-177 2606 chr3R 31137154 31137181 chr3R 31137243 31137281 9 96 4.5 3.5 4.0 1.8 127 chr3R 31137154 intron Gycbeta100B + chr3R 31137218 intron Gycbeta100B + chr3R 31137281 intron Gycbeta100B + chr3R_9_31135001 chr3R_31135001 RAL-177 2607 chr3R 31188007 31188053 chr3R 31188127 31188170 9 120 2.5 3.0 2.8 2.4 163 chr3R 31188007 intron mesh - chr3R 31188088 intron mesh - chr3R 31188170 intron mesh - chr3R_9_31185001 chr3R_31185001 RAL-177 2608 chr3R 31279364 31279408 chr3R 31285570 31285609 diver 6 6206 4.0 4.0 4.0 1.2 6245 chr3R 31279364 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285609 intergenic not near genes chr3R_6_31280001 chr3R_31280001 RAL-177 2609 chr3R 31413073 31413108 chr3R 31418293 31418311 copia 8 5216 4.0 1.0 2.5 2.3 5238 chr3R 31413073 intron Gprk2 + chr3R 31415692 intron Gprk2 + chr3R 31418311 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 RAL-177 2610 chr3R 31426869 31426911 chr3R 31426981 31427023 11 111 2.0 6.0 4.0 2.2 154 chr3R 31426869 intron Gprk2 + chr3R 31426946 intron Gprk2 + chr3R 31427023 intron Gprk2 + chr3R_11_31425001 chr3R_31425001 RAL-177 2611 chr3R 31430726 31430744 chr3R 31430814 31430821 4 90 5.0 4.0 4.5 0.7 95 chr3R 31430726 intron Gprk2 + chr3R 31430774 intron Gprk2 + chr3R 31430821 intron Gprk2 + chr3R_4_31430001 chr3R_31430001 RAL-177 2612 chr3R 31435342 31435389 chr3R 31435514 31435521 12 168 5.5 0.0 2.8 3.2 179 chr3R 31435342 intron Gprk2 + chr3R 31435432 intron Gprk2 + chr3R 31435521 intron Gprk2 + chr3R_12_31435001 chr3R_31435001 RAL-177 2613 chr3R 31435545 31435582 chr3R 31435816 31435864 17 269 0.0 5.5 2.8 4.5 319 chr3R 31435545 intron Gprk2 + chr3R 31435704 intron Gprk2 + chr3R 31435864 intron Gprk2 + chr3R_17_31435001 chr3R_31435001 RAL-177 2614 chr3R 31437627 31437638 chr3R 31437840 31437852 5 214 2.5 7.0 4.8 0.9 225 chr3R 31437627 intron Gprk2 + chr3R 31437740 intron Gprk2 + chr3R 31437852 intron Gprk2 + chr3R_5_31435001 chr3R_31435001 RAL-177 2615 chr3R 31530798 31530847 chr3R 31531145 31531188 10 335 7.0 2.0 4.5 1.8 390 chr3R 31530798 intergenic not near genes chr3R 31530993 intergenic not near genes chr3R 31531188 intergenic not near genes chr3R_10_31530001 chr3R_31530001 RAL-177 2616 chr3R 31538472 31538517 chr3R 31538570 31538615 15 98 1.5 6.0 3.8 3.1 143 chr3R 31538472 intergenic not near genes chr3R 31538544 intergenic not near genes chr3R 31538615 intergenic not near genes chr3R_15_31535001 chr3R_31535001 RAL-177 2617 chr3R 31691517 31691556 chr3R 31696303 31696316 Doc 15 4779 4.0 10.0 7.0 1.9 4799 chr3R 31691517 intergenic not near genes chr3R 31693916 intergenic not near genes chr3R 31696316 intergenic not near genes chr3R_15_31690001 chr3R_31690001 RAL-177 2618 chr3R 31808592 31808641 chr3R 31808688 31808737 23 93 6.5 4.5 5.5 3.5 145 chr3R 31808592 intron CG11576 - chr3R 31808664 intron CG11576 - chr3R 31808737 intron CG11576 - chr3R_23_31805001 chr3R_31805001 RAL-177 2619 chr3R 31809238 31809267 chr3R 31809349 31809388 10 120 6.0 3.5 4.8 1.7 150 chr3R 31809238 intron CG11576 - chr3R 31809313 intron CG11576 - chr3R 31809388 intron CG11576 - chr3R_10_31805001 chr3R_31805001 RAL-177 2620 chr3R 31819306 31819351 chr3R 31819444 31819458 11 135 2.5 3.5 3.0 2.8 152 chr3R 31819306 intron RhoGAP100F + chr3R 31819382 intron RhoGAP100F + chr3R 31819458 intron RhoGAP100F + chr3R_11_31815001 chr3R_31815001 RAL-177 2621 chr3R 31827246 31827297 chr3R 31827345 31827391 11 96 5.0 2.5 3.8 2.3 145 chr3R 31827246 intron RhoGAP100F + chr3R 31827318 intron RhoGAP100F + chr3R 31827391 intron RhoGAP100F + chr3R_11_31825001 chr3R_31825001 RAL-177 2622 chr3R 31858731 31858762 chr3R 31858835 31858862 5 104 5.5 3.5 4.5 0.9 131 chr3R 31858731 intron heph - chr3R 31858796 intron heph - chr3R 31858862 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-177 2623 chr3R 31885656 31885697 chr3R 31885752 31885794 8 97 8.0 4.0 6.0 1.1 138 chr3R 31885656 intron heph - chr3R 31885725 intron heph - chr3R 31885794 intron heph - chr3R_8_31885001 chr3R_31885001 RAL-177 2624 chr3R 31961326 31961344 chr3R 31961428 31961433 8 100 9.0 3.5 6.2 1.1 107 chr3R 31961326 intron heph - chr3R 31961380 intron heph - chr3R 31961433 intron heph - chr3R_8_31960001 chr3R_31960001 RAL-177 2625 chr3R 31961351 31961357 chr3R 31961427 31961460 9 97 7.0 3.5 5.2 1.5 109 chr3R 31961351 intron heph - chr3R 31961406 intron heph - chr3R 31961460 intron heph - chr3R_9_31960001 chr3R_31960001 RAL-177 2626 chr3R 31962067 31962089 chr3R 31962387 31962415 7 324 6.0 0.5 3.2 1.7 348 chr3R 31962067 intron heph - chr3R 31962241 intron heph - chr3R 31962415 intron heph - chr3R_7_31960001 chr3R_31960001 RAL-177 2627 chr3R 31962457 31962471 chr3R 31962561 31962575 4 104 0.0 4.5 2.2 1.2 118 chr3R 31962457 intron heph - chr3R 31962516 intron heph - chr3R 31962575 intron heph - chr3R_4_31960001 chr3R_31960001 RAL-177 2628 chr3R 31964154 31964181 chr3R 31964270 31964297 17 116 2.0 2.5 2.2 5.3 143 chr3R 31964154 intron heph - chr3R 31964226 intron heph - chr3R 31964297 intron heph - chr3R_17_31960001 chr3R_31960001 RAL-177 2629 chr3R 31976538 31976575 chr3R 31976839 31976876 8 301 0.5 3.0 1.8 2.9 338 chr3R 31976538 intron heph - chr3R 31976707 intron heph - chr3R 31976876 intron heph - chr3R_8_31975001 chr3R_31975001 RAL-177 2630 chr3R 31997974 31998006 chr3R 32005464 32005496 blood 6 7488 5.5 4.0 4.8 1.0 7522 chr3R 31997974 intron heph - chr3R 32001735 intron heph - chr3R 32005496 intron heph - chr3R_6_32000001 chr3R_32000001 RAL-177 2631 chr4 61375 61384 chr4 61599 61616 4 230 1.5 3.0 2.2 1.2 241 chr4 61375 intron CR43957 + chr4 61496 intron CR43957 + chr4 61616 intron CR43957 + chr4_4_60001 chr4_60001 RAL-177 2632 chr4 132533 132576 chr4 132866 132901 7 330 0.5 2.5 1.5 2.8 368 chr4 132533 intron CG32000 + chr4 132717 intron,3` UTR CG32000 +,CR43956 - chr4 132901 intron CG32000 + chr4_7_130001 chr4_130001 RAL-177 2633 chr4 319970 320017 chr4 328166 328197 Stalker2 13 8195 5.0 5.0 5.0 2.2 8227 chr4 319970 3` UTR CG32850 + chr4 324084 intron CG32850 + chr4 328197 3` UTR,3` UTR CG32850 +,PMCA - chr4_13_320001 chr4_320001 RAL-177 2634 chr4 504767 504805 chr4 504868 504912 18 104 3.0 8.5 5.8 2.6 145 chr4 504767 intron zfh2 + chr4 504840 intron zfh2 + chr4 504912 intron zfh2 + chr4_18_500001 chr4_500001 RAL-177 2635 chr4 662168 662202 chr4 662833 662867 INE-1 5 661 3.0 3.0 3.0 1.2 699 chr4 662168 intron gw - chr4 662518 intron gw - chr4 662867 5` UTR gw - chr4_5_660001 chr4_660001 RAL-177 2636 chr4 671590 671632 chr4 680191 680221 Tirant 13 8601 2.5 6.0 4.2 2.5 8631 chr4 671590 intron CG11360 + chr4 675906 intron CG11360 + chr4 680221 intron CG11360 + chr4_13_675001 chr4_675001 RAL-177 2637 chr4 1096315 1096345 chr4 1096513 1096543 5 197 5.5 4.0 4.8 0.9 228 chr4 1096315 intron sv + chr4 1096429 intron sv + chr4 1096543 intron sv + chr4_5_1095001 chr4_1095001 RAL-177 2638 chrX 295836 295877 chrX 303476 303516 412 6 7640 3.0 2.0 2.5 1.7 7680 chrX 295836 intron CG3777 + chrX 299676 intron CG3777 + chrX 303516 intron CG3777 + chrX_6_295001 chrX_295001 RAL-177 2639 chrX 318470 318498 chrX 323556 323587 flea 4 5097 4.0 4.5 4.2 0.8 5117 chrX 318470 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323587 intron,intron CG3777 +,CG32816 - chrX_4_320001 chrX_320001 RAL-177 2640 chrX 428403 428445 chrX 434608 434650 3S18 12 6205 4.0 4.0 4.0 2.4 6247 chrX 428403 intron CG32816 - chrX 431526 intron CG32816 - chrX 434650 intron CG32816 - chrX_12_430001 chrX_430001 RAL-177 2641 chrX 450345 450389 chrX 450443 450487 14 97 4.0 4.0 4.0 2.8 142 chrX 450345 intron CG32816 - chrX 450416 intron CG32816 - chrX 450487 intron CG32816 - chrX_14_450001 chrX_450001 RAL-177 2642 chrX 559419 559468 chrX 559773 559822 17 351 1.0 3.0 2.0 5.7 403 chrX 559419 intron Appl + chrX 559620 intron Appl + chrX 559822 intron Appl + chrX_17_555001 chrX_555001 RAL-177 2643 chrX 617959 617996 chrX 618059 618096 11 96 8.5 4.5 6.5 1.5 137 chrX 617959 intron CG13366 - chrX 618028 intron CG13366 - chrX 618096 intron CG13366 - chrX_11_615001 chrX_615001 RAL-177 2644 chrX 667630 667669 chrX 667734 667773 17 104 3.5 3.0 3.2 4.0 143 chrX 667630 intergenic not near genes chrX 667702 intergenic not near genes chrX 667773 intergenic not near genes chrX_17_665001 chrX_665001 RAL-177 2645 chrX 670252 670293 chrX 670352 670389 12 96 0.0 1.5 0.8 6.7 137 chrX 670252 intergenic not near genes chrX 670320 intergenic not near genes chrX 670389 intergenic not near genes chrX_12_670001 chrX_670001 RAL-177 2646 chrX 680836 680843 chrX 680939 680944 4 102 5.0 4.5 4.8 0.7 108 chrX 680836 intergenic not near genes chrX 680890 intergenic not near genes chrX 680944 intergenic not near genes chrX_4_680001 chrX_680001 RAL-177 2647 chrX 706773 706816 chrX 707162 707200 4 385 0.0 2.0 1.0 2.0 427 chrX 706773 intron sdk + chrX 706986 intron sdk + chrX 707200 intron sdk + chrX_4_705001 chrX_705001 RAL-177 2648 chrX 718312 718348 chrX 718412 718448 5 98 2.5 1.5 2.0 1.7 136 chrX 718312 intron sdk + chrX 718380 intron sdk + chrX 718448 intron sdk + chrX_5_715001 chrX_715001 RAL-177 2649 chrX 718353 718360 chrX 718411 718460 5 92 1.5 1.5 1.5 2.0 107 chrX 718353 intron sdk + chrX 718406 intron sdk + chrX 718460 intron sdk + chrX_5_715001 chrX_715001 RAL-177 2650 chrX 778105 778157 chrX 778215 778267 11 107 3.0 0.0 1.5 4.4 162 chrX 778105 intron fz3 + chrX 778186 intron fz3 + chrX 778267 intron fz3 + chrX_11_775001 chrX_775001 RAL-177 2651 chrX 780582 780593 chrX 780678 780687 5 96 6.0 0.5 3.2 1.2 105 chrX 780582 intron fz3 + chrX 780634 intron fz3 + chrX 780687 intron fz3 + chrX_5_780001 chrX_780001 RAL-177 2652 chrX 802285 802320 chrX 802382 802402 5 88 5.0 8.0 6.5 0.7 117 chrX 802285 exon CG13359 - chrX 802344 exon CG13359 - chrX 802402 exon CG13359 - chrX_5_800001 chrX_800001 RAL-177 2653 chrX 812246 812295 chrX 817897 817946 297 12 5650 4.0 5.0 4.5 2.2 5700 chrX 812246 intron CG43867 - chrX 815096 intron CG43867 - chrX 817946 intron CG43867 - chrX_12_815001 chrX_815001 RAL-177 2654 chrX 827589 827606 chrX 835395 835395 roo 6 7806 6.5 3.0 4.8 1.0 7806 chrX 827589 intron CG43867 - chrX 831492 intron CG43867 - chrX 835395 intron CG43867 - chrX_6_830001 chrX_830001 RAL-177 2655 chrX 827607 827632 chrX 835394 835444 roo 7 7805 4.0 3.0 3.5 1.6 7837 chrX 827607 intron CG43867 - chrX 831526 intron CG43867 - chrX 835444 intron CG43867 - chrX_7_830001 chrX_830001 RAL-177 2656 chrX 906690 906734 chrX 908492 908543 S-element 11 1804 2.5 10.0 6.2 1.5 1853 chrX 906690 intron CG43867 - chrX 907616 intron CG43867 - chrX 908543 intron CG43867 - chrX_11_905001 chrX_905001 RAL-177 2657 chrX 1024432 1024461 chrX 1024534 1024563 6 102 1.5 7.0 4.2 1.2 131 chrX 1024432 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024498 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX 1024563 intron,intron,intron su(w[a]) +,CG11638 -,CG32814 - chrX_6_1020001 chrX_1020001 RAL-177 2658 chrX 1085094 1085115 chrX 1085190 1085211 7 96 5.5 1.5 3.5 1.6 117 chrX 1085094 5` UTR,intron CR44779 +,CG3655 - chrX 1085152 5` UTR,intron CR44779 +,CG3655 - chrX 1085211 5` UTR,intron CR44779 +,CG3655 - chrX_7_1085001 chrX_1085001 RAL-177 2659 chrX 1253718 1253756 chrX 1253820 1253858 10 100 5.5 4.5 5.0 1.7 140 chrX 1253718 intron Atf3 - chrX 1253788 intron Atf3 - chrX 1253858 intron Atf3 - chrX_10_1250001 chrX_1250001 RAL-177 2660 chrX 1357773 1357806 chrX 1367953 1367996 Doc 11 10189 7.5 7.5 7.5 1.3 10223 chrX 1357773 intergenic png - chrX 1362884 intergenic not near genes chrX 1367996 intergenic not near genes chrX_11_1360001 chrX_1360001 RAL-177 2661 chrX 1402243 1402285 chrX 1402621 1402663 7 371 8.5 4.5 6.5 0.9 420 chrX 1402243 intergenic not near genes chrX 1402453 intergenic not near genes chrX 1402663 intergenic not near genes chrX_7_1400001 chrX_1400001 RAL-177 2662 chrX 1428571 1428604 chrX 1428677 1428710 11 106 9.0 3.0 6.0 1.6 139 chrX 1428571 intron futsch + chrX 1428640 intron futsch + chrX 1428710 intron futsch + chrX_11_1425001 chrX_1425001 RAL-177 2663 chrX 1518022 1518050 chrX 1523443 1523466 jockey 10 5418 4.5 6.0 5.2 1.6 5444 chrX 1518022 intergenic inc + chrX 1520744 intergenic not near genes chrX 1523466 intergenic not near genes chrX_10_1520001 chrX_1520001 RAL-177 2664 chrX 1518054 1518063 chrX 1523436 1523485 jockey 5 5410 3.5 5.5 4.5 0.9 5431 chrX 1518054 intergenic inc + chrX 1520770 intergenic not near genes chrX 1523485 intergenic not near genes chrX_5_1520001 chrX_1520001 RAL-177 2665 chrX 1560642 1560688 chrX 1560747 1560756 11 101 2.0 3.5 2.8 2.9 114 chrX 1560642 intron Mur2B - chrX 1560699 intron Mur2B - chrX 1560756 intron Mur2B - chrX_11_1560001 chrX_1560001 RAL-177 2666 chrX 1627972 1627987 chrX 1635450 1635460 gtwin 4 7482 3.0 6.0 4.5 0.7 7488 chrX 1627972 intron,intron Mur2B -,br + chrX 1631716 intron,intron Mur2B -,br + chrX 1635460 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-177 2667 chrX 1894186 1894231 chrX 1894296 1894329 15 107 2.0 6.5 4.2 2.9 143 chrX 1894186 intron arm - chrX 1894258 intron arm - chrX 1894329 intron arm - chrX_15_1890001 chrX_1890001 RAL-177 2668 chrX 1930519 1930564 chrX 1938110 1938155 opus 20 7590 8.5 8.0 8.2 2.2 7636 chrX 1930519 intergenic CG11596 + chrX 1934337 intergenic not near genes chrX 1938155 3` UTR CG3857 - chrX_20_1930001 chrX_1930001 RAL-177 2669 chrX 1954868 1954915 chrX 1962828 1962870 Stalker2 10 7955 2.5 0.5 1.5 4.0 8002 chrX 1954868 intron Hr4 + chrX 1958869 intron Hr4 + chrX 1962870 intron Hr4 + chrX_10_1955001 chrX_1955001 RAL-177 2670 chrX 1968282 1968377 chrX 1968476 1968525 6 169 36.5 32.5 34.5 0.2 243 chrX 1968282 intron Hr4 + chrX 1968404 intron Hr4 + chrX 1968525 intron Hr4 + chrX_6_1965001 chrX_1965001 RAL-177 2671 chrX 2069353 2069403 chrX 2069473 2069523 19 120 5.0 7.0 6.0 2.7 170 chrX 2069353 intron,exon CG4199 -,CG4194 + chrX 2069438 intron,3` UTR CG4199 -,CG4194 + chrX 2069523 intron,3` UTR CG4199 -,CG4194 + chrX_19_2065001 chrX_2065001 RAL-177 2672 chrX 2385716 2385758 chrX 2385814 2385841 13 97 1.0 2.0 1.5 5.2 125 chrX 2385716 exon PsGEF - chrX 2385778 intron PsGEF - chrX 2385841 intron PsGEF - chrX_13_2385001 chrX_2385001 RAL-177 2673 chrX 2399832 2399865 chrX 2408193 2408216 roo 9 8360 2.0 5.0 3.5 2.0 8384 chrX 2399832 intergenic not near genes chrX 2404024 intergenic not near genes chrX 2408216 intergenic not near genes chrX_9_2400001 chrX_2400001 RAL-177 2674 chrX 2429655 2429667 chrX 2429746 2429768 6 99 0.0 3.0 1.5 2.4 113 chrX 2429655 intergenic not near genes chrX 2429712 intergenic not near genes chrX 2429768 intergenic not near genes chrX_6_2425001 chrX_2425001 RAL-177 2675 chrX 2548664 2548707 chrX 2548775 2548800 10 106 2.0 4.5 3.2 2.4 136 chrX 2548664 intergenic not near genes chrX 2548732 intergenic not near genes chrX 2548800 intergenic not near genes chrX_10_2545001 chrX_2545001 RAL-177 2676 chrX 2578807 2578841 chrX 2578931 2578965 10 123 1.0 7.0 4.0 2.0 158 chrX 2578807 intergenic Pdfr +,Vha36-3 - chrX 2578886 intergenic Vha36-3 -,Pdfr + chrX 2578965 intergenic Vha36-3 -,Pdfr + chrX_10_2575001 chrX_2575001 RAL-177 2677 chrX 2635355 2635401 chrX 2635484 2635530 14 127 3.5 5.5 4.5 2.5 175 chrX 2635355 intron sgg + chrX 2635442 intron sgg + chrX 2635530 intron sgg + chrX_14_2635001 chrX_2635001 RAL-177 2678 chrX 2664373 2664416 chrX 2665533 2665582 1360 19 1164 7.0 6.5 6.8 2.4 1209 chrX 2664373 intron sgg + chrX 2664978 intron sgg + chrX 2665582 intron sgg + chrX_19_2660001 chrX_2660001 RAL-177 2679 chrX 2844879 2844927 chrX 2852309 2852345 mdg1 16 7429 2.5 3.0 2.8 4.2 7466 chrX 2844879 intron kirre + chrX 2848612 intron kirre + chrX 2852345 intron kirre + chrX_16_2845001 chrX_2845001 RAL-177 2680 chrX 3058001 3058045 chrX 3058262 3058306 pogo 6 261 5.5 5.0 5.2 1.0 305 chrX 3058001 intron kirre + chrX 3058154 intron kirre + chrX 3058306 intron kirre + chrX_6_3055001 chrX_3055001 RAL-177 2681 chrX 3075636 3075663 chrX 3080938 3080977 Transpac 11 5319 7.5 9.0 8.2 1.2 5341 chrX 3075636 intron kirre + chrX 3078306 intron kirre + chrX 3080977 intron kirre + chrX_11_3075001 chrX_3075001 RAL-177 2682 chrX 3104457 3104477 chrX 3104836 3104846 4 376 0.0 2.0 1.0 2.0 389 chrX 3104457 intron kirre + chrX 3104652 intron kirre + chrX 3104846 intron kirre + chrX_4_3100001 chrX_3100001 RAL-177 2683 chrX 3120074 3120096 chrX 3120155 3120163 9 87 1.0 4.0 2.5 2.6 89 chrX 3120074 intron kirre + chrX 3120118 intron kirre + chrX 3120163 intron kirre + chrX_9_3120001 chrX_3120001 RAL-177 2684 chrX 3203445 3203493 chrX 3203664 3203712 8 219 3.0 7.0 5.0 1.3 267 chrX 3203445 intron dnc + chrX 3203578 intron dnc + chrX 3203712 intron dnc + chrX_8_3200001 chrX_3200001 RAL-177 2685 chrX 3218487 3218539 chrX 3227656 3227708 roo 11 9169 4.5 4.0 4.2 2.1 9221 chrX 3218487 intron dnc + chrX 3223098 intron dnc + chrX 3227708 intron dnc + chrX_11_3220001 chrX_3220001 RAL-177 2686 chrX 3243614 3243656 chrX 3243724 3243766 13 110 6.0 6.5 6.2 1.8 152 chrX 3243614 intron dnc + chrX 3243690 intron dnc + chrX 3243766 intron dnc + chrX_13_3240001 chrX_3240001 RAL-177 2687 chrX 3268073 3268089 chrX 3268338 3268345 5 261 7.0 2.5 4.8 0.9 272 chrX 3268073 intron dnc + chrX 3268209 intron dnc + chrX 3268345 intron dnc + chrX_5_3265001 chrX_3265001 RAL-177 2688 chrX 3398124 3398379 chrX 3398224 3398477 10 100 3.0 7.0 5.0 1.7 353 chrX 3398124 intron,intron CR44999 +,CG12535 - chrX 3398300 intron,intron CR44999 +,CG12535 - chrX 3398477 intron,intron CR44999 +,CG12535 - chrX_10_3395001 chrX_3395001 RAL-177 2689 chrX 3415006 3415050 chrX 3421210 3421255 3S18 11 6205 2.0 4.5 3.2 2.6 6249 chrX 3415006 intron,intron CR44999 +,CG12535 - chrX 3418130 intron,intron CR44999 +,CG12535 - chrX 3421255 intron,intron CR44999 +,CG12535 - chrX_11_3415001 chrX_3415001 RAL-177 2690 chrX 3493071 3493125 chrX 3502250 3502303 roo 17 9178 3.5 2.0 2.8 4.5 9232 chrX 3493071 intron,intron CR44999 +,Gas8 - chrX 3497687 intron,intron CR44999 +,Gas8 - chrX 3502303 intron,intron CR44999 +,Gas8 - chrX_17_3495001 chrX_3495001 RAL-177 2691 chrX 3597531 3597582 chrX 3619719 3619770 roo 15 22186 2.5 2.5 2.5 4.3 22239 chrX 3597531 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619770 intron AstA-R1 + chrX_15_3605001 chrX_3605001 RAL-177 2692 chrX 3713087 3713128 chrX 3713215 3713249 5 127 2.0 2.5 2.2 1.6 162 chrX 3713087 intron Rala - chrX 3713168 intron Rala - chrX 3713249 intron Rala - chrX_5_3710001 chrX_3710001 RAL-177 2693 chrX 3726747 3726773 chrX 3730164 3730190 NOF 5 3411 3.0 0.0 1.5 2.0 3443 chrX 3726747 intron tlk + chrX 3728468 intron tlk + chrX 3730190 intron tlk + chrX_5_3725001 chrX_3725001 RAL-177 2694 chrX 3842313 3842347 chrX 3842569 3842608 pogo 12 261 4.5 5.0 4.8 2.1 295 chrX 3842313 intron ec + chrX 3842460 intron ec + chrX 3842608 intron ec + chrX_12_3840001 chrX_3840001 RAL-177 2695 chrX 3862812 3862845 chrX 3862919 3862952 5 107 3.5 4.5 4.0 1.0 140 chrX 3862812 intergenic yin - chrX 3862882 intergenic yin - chrX 3862952 intergenic yin - chrX_5_3860001 chrX_3860001 RAL-177 2696 chrX 3866085 3866134 chrX 3866183 3866212 14 96 5.5 0.0 2.8 3.7 127 chrX 3866085 intron yin - chrX 3866148 intron yin - chrX 3866212 intron yin - chrX_14_3865001 chrX_3865001 RAL-177 2697 chrX 3881251 3881304 chrX 3881410 3881463 15 156 2.5 4.5 3.5 3.3 212 chrX 3881251 intron VhaAC39-1 + chrX 3881357 intron VhaAC39-1 + chrX 3881463 exon VhaAC39-1 + chrX_15_3880001 chrX_3880001 RAL-177 2698 chrX 3986855 3986888 chrX 3994503 3994541 412 9 7652 5.0 6.5 5.8 1.3 7686 chrX 3986855 intergenic not near genes chrX 3990698 intergenic not near genes chrX 3994541 intergenic not near genes chrX_9_3990001 chrX_3990001 RAL-177 2699 chrX 4029510 4029560 chrX 4029720 4029770 7 208 4.0 1.5 2.8 1.8 260 chrX 4029510 intergenic not near genes chrX 4029640 intergenic not near genes chrX 4029770 intergenic not near genes chrX_7_4025001 chrX_4025001 RAL-177 2700 chrX 4132650 4132699 chrX 4132839 4132888 15 189 7.0 6.0 6.5 2.0 238 chrX 4132650 3` UTR GlcAT-I + chrX 4132769 3` UTR GlcAT-I + chrX 4132888 3` UTR Fas2 - chrX_15_4130001 chrX_4130001 RAL-177 2701 chrX 4157882 4157922 chrX 4164955 4164995 297 14 7072 1.0 5.5 3.2 3.3 7113 chrX 4157882 intron Fas2 - chrX 4161438 intron Fas2 - chrX 4164995 intron Fas2 - chrX_14_4160001 chrX_4160001 RAL-177 2702 chrX 4229971 4229993 chrX 4230107 4230129 5 136 3.0 4.0 3.5 1.1 158 chrX 4229971 intergenic not near genes chrX 4230050 intergenic not near genes chrX 4230129 intergenic not near genes chrX_5_4230001 chrX_4230001 RAL-177 2703 chrX 4324372 4324415 chrX 4324469 4324512 9 96 5.0 2.5 3.8 1.9 140 chrX 4324372 intron norpA + chrX 4324442 intron norpA + chrX 4324512 intron norpA + chrX_9_4320001 chrX_4320001 RAL-177 2704 chrX 4351624 4351667 chrX 4351778 4351821 8 154 4.0 4.0 4.0 1.6 197 chrX 4351624 intron norpA + chrX 4351722 intron norpA + chrX 4351821 intron norpA + chrX_8_4350001 chrX_4350001 RAL-177 2705 chrX 4396972 4397003 chrX 4397059 4397108 11 103 2.5 0.5 1.5 4.4 136 chrX 4396972 intron CR32773 - chrX 4397040 intron CR32773 - chrX 4397108 intron CR32773 - chrX_11_4395001 chrX_4395001 RAL-177 2706 chrX 4515844 4515859 chrX 4515930 4515957 6 96 1.0 6.0 3.5 1.3 113 chrX 4515844 intron CR32773 - chrX 4515900 intron CR32773 - chrX 4515957 intron CR32773 - chrX_6_4515001 chrX_4515001 RAL-177 2707 chrX 4578558 4578602 chrX 4578660 4578705 16 99 3.5 0.0 1.8 5.7 147 chrX 4578558 intron CR32773 - chrX 4578632 intron CR32773 - chrX 4578705 intron CR32773 - chrX_16_4575001 chrX_4575001 RAL-177 2708 chrX 4660813 4660828 chrX 4660926 4660947 4 118 7.5 0.0 3.8 0.8 134 chrX 4660813 intron CG3009 - chrX 4660880 intron CG3009 - chrX 4660947 intron CG3009 - chrX_4_4660001 chrX_4660001 RAL-177 2709 chrX 4700372 4700425 chrX 4700735 4700788 jockey 8 361 3.5 6.0 4.8 1.4 416 chrX 4700372 3` UTR ctp + chrX 4700580 3` UTR ctp + chrX 4700788 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-177 2710 chrX 4731796 4731812 chrX 4736909 4736925 jockey 4 5113 4.5 0.5 2.5 1.1 5129 chrX 4731796 intergenic not near genes chrX 4734360 intergenic not near genes chrX 4736925 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-177 2711 chrX 4792368 4792400 chrX 4792821 4792847 jockey 4 452 2.5 8.5 5.5 0.6 479 chrX 4792368 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792847 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-177 2712 chrX 4827952 4827977 chrX 4835343 4835362 Stalker4 5 7390 6.0 2.5 4.2 1.0 7410 chrX 4827952 intergenic not near genes chrX 4831657 intergenic not near genes chrX 4835362 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-177 2713 chrX 4827983 4828002 chrX 4835339 4835378 Stalker4 5 7380 2.5 2.0 2.2 1.6 7395 chrX 4827983 intergenic not near genes chrX 4831680 intergenic not near genes chrX 4835378 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-177 2714 chrX 4885763 4885803 chrX 4885871 4885906 12 99 1.0 1.5 1.2 5.5 143 chrX 4885763 intron CG42594 + chrX 4885834 intron CG42594 + chrX 4885906 intron CG42594 + chrX_12_4885001 chrX_4885001 RAL-177 2715 chrX 4931345 4931378 chrX 4931459 4931492 7 114 20.0 21.5 20.8 0.3 147 chrX 4931345 intron CG44774 - chrX 4931418 intron CG44774 - chrX 4931492 intron CG44774 - chrX_7_4930001 chrX_4930001 RAL-177 2716 chrX 5096262 5096303 chrX 5103847 5103888 springer 5 7585 5.0 7.0 6.0 0.7 7626 chrX 5096262 intron,intron CG15465 +,rg + chrX 5100075 intron,intron CG15465 +,rg + chrX 5103888 intron,intron CG15465 +,rg + chrX_5_5100001 chrX_5100001 RAL-177 2717 chrX 5134797 5134829 chrX 5134897 5134950 12 119 4.0 3.0 3.5 2.7 153 chrX 5134797 intron,intron CG15465 +,rg + chrX 5134874 intron,intron CG15465 +,rg + chrX 5134950 intron,intron CG15465 +,rg + chrX_12_5130001 chrX_5130001 RAL-177 2718 chrX 5159711 5159737 chrX 5159826 5159852 8 115 6.0 2.0 4.0 1.6 141 chrX 5159711 intron,intron CG15465 +,rg + chrX 5159782 intron,intron CG15465 +,rg + chrX 5159852 intron,intron CG15465 +,rg + chrX_8_5155001 chrX_5155001 RAL-177 2719 chrX 5272804 5272852 chrX 5272911 5272939 7 104 1.5 3.0 2.2 2.2 135 chrX 5272804 intergenic not near genes chrX 5272872 intergenic not near genes chrX 5272939 intergenic not near genes chrX_7_5270001 chrX_5270001 RAL-177 2720 chrX 5291488 5291511 chrX 5291591 5291613 6 100 2.5 4.0 3.2 1.4 125 chrX 5291488 intergenic not near genes chrX 5291550 intergenic not near genes chrX 5291613 intergenic not near genes chrX_6_5290001 chrX_5290001 RAL-177 2721 chrX 5338687 5338736 chrX 5339960 5339980 jockey 5 1266 2.5 2.0 2.2 1.6 1293 chrX 5338687 intergenic not near genes chrX 5339334 intergenic not near genes chrX 5339980 intergenic SK + chrX_5_5335001 chrX_5335001 RAL-177 2722 chrX 5350297 5350313 chrX 5350426 5350442 5 129 3.5 8.5 6.0 0.7 145 chrX 5350297 intron SK + chrX 5350370 intron SK + chrX 5350442 intron SK + chrX_5_5350001 chrX_5350001 RAL-177 2723 chrX 5366284 5366334 chrX 5366432 5366482 12 146 2.5 3.0 2.8 3.2 198 chrX 5366284 intron SK + chrX 5366383 intron SK + chrX 5366482 intron SK + chrX_12_5365001 chrX_5365001 RAL-177 2724 chrX 5473566 5473617 chrX 5473662 5473713 19 93 3.0 2.5 2.8 5.0 147 chrX 5473566 intron SPR + chrX 5473640 intron SPR + chrX 5473713 intron SPR + chrX_19_5470001 chrX_5470001 RAL-177 2725 chrX 5524820 5524856 chrX 5528703 5528739 412 16 3883 8.5 3.5 6.0 2.3 3919 chrX 5524820 intergenic snoRNA:Psi28S-3342 - chrX 5526780 intergenic not near genes chrX 5528739 intergenic Vsx2 - chrX_16_5525001 chrX_5525001 RAL-177 2726 chrX 5727403 5727416 chrX 5732162 5732175 Doc 4 4759 5.0 4.0 4.5 0.7 4772 chrX 5727403 intron CG32758 - chrX 5729789 intron CG32758 - chrX 5732175 intron CG32758 - chrX_4_5725001 chrX_5725001 RAL-177 2727 chrX 5739290 5739344 chrX 5739388 5739442 13 98 8.5 4.0 6.2 1.8 152 chrX 5739290 3` UTR IntS6 - chrX 5739366 3` UTR IntS6 - chrX 5739442 3` UTR IntS6 - chrX_13_5735001 chrX_5735001 RAL-177 2728 chrX 5883811 5883837 chrX 5884072 5884098 pogo 7 260 3.0 8.5 5.8 1.0 287 chrX 5883811 intron CR45668 - chrX 5883954 intron CR45668 - chrX 5884098 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-177 2729 chrX 5884148 5884189 chrX 5884409 5884449 pogo 11 258 5.0 6.0 5.5 1.7 301 chrX 5884148 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884449 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-177 2730 chrX 5896994 5897040 chrX 5897093 5897139 16 96 5.5 1.5 3.5 3.6 145 chrX 5896994 intron CR45668 - chrX 5897066 intron CR45668 - chrX 5897139 intron CR45668 - chrX_16_5895001 chrX_5895001 RAL-177 2731 chrX 5973994 5974009 chrX 5974098 5974119 4 108 6.5 5.5 6.0 0.6 125 chrX 5973994 intron Grip + chrX 5974056 intron Grip + chrX 5974119 intron Grip + chrX_4_5970001 chrX_5970001 RAL-177 2732 chrX 5974021 5974028 chrX 5974096 5974139 6 93 3.5 5.0 4.2 1.2 118 chrX 5974021 intron Grip + chrX 5974080 intron Grip + chrX 5974139 intron Grip + chrX_6_5970001 chrX_5970001 RAL-177 2733 chrX 6037534 6037584 chrX 6037737 6037786 9 203 5.5 5.0 5.2 1.5 252 chrX 6037534 intron rux - chrX 6037660 intron rux - chrX 6037786 5` UTR rux - chrX_9_6035001 chrX_6035001 RAL-177 2734 chrX 6041086 6041112 chrX 6041182 6041214 7 101 0.5 3.0 1.8 2.5 128 chrX 6041086 intron CG5937 + chrX 6041150 intron CG5937 + chrX 6041214 intron CG5937 + chrX_7_6040001 chrX_6040001 RAL-177 2735 chrX 6065461 6065479 chrX 6065561 6065585 11 105 9.0 3.0 6.0 1.6 124 chrX 6065461 3` UTR CG5921 + chrX 6065523 3` UTR CG5921 + chrX 6065585 3` UTR CG5921 + chrX_11_6065001 chrX_6065001 RAL-177 2736 chrX 6080814 6080827 chrX 6080918 6080931 5 104 9.0 4.5 6.8 0.6 117 chrX 6080814 intron CG4660 - chrX 6080872 intron CG4660 - chrX 6080931 intron CG4660 - chrX_5_6080001 chrX_6080001 RAL-177 2737 chrX 6118682 6118733 chrX 6118784 6118835 9 101 3.0 1.5 2.2 2.8 153 chrX 6118682 intron Ca-alpha1T - chrX 6118758 intron Ca-alpha1T - chrX 6118835 intron Ca-alpha1T - chrX_9_6115001 chrX_6115001 RAL-177 2738 chrX 6171566 6171614 chrX 6179019 6179067 Quasimodo 19 7453 4.0 5.0 4.5 3.5 7501 chrX 6171566 intron Ca-alpha1T - chrX 6175316 intron Ca-alpha1T - chrX 6179067 intron Ca-alpha1T - chrX_19_6175001 chrX_6175001 RAL-177 2739 chrX 6215335 6215366 chrX 6215428 6215469 15 100 0.0 3.0 1.5 6.0 134 chrX 6215335 intergenic not near genes chrX 6215402 intergenic not near genes chrX 6215469 intergenic not near genes chrX_15_6215001 chrX_6215001 RAL-177 2740 chrX 6216338 6216381 chrX 6216485 6216528 22 146 2.0 2.0 2.0 7.3 190 chrX 6216338 intergenic not near genes chrX 6216433 intergenic not near genes chrX 6216528 intergenic not near genes chrX_22_6215001 chrX_6215001 RAL-177 2741 chrX 6314170 6314224 chrX 6314282 6314336 13 111 3.0 1.0 2.0 4.3 166 chrX 6314170 intron CG15894 + chrX 6314253 intron CG15894 + chrX 6314336 intron CG15894 + chrX_13_6310001 chrX_6310001 RAL-177 2742 chrX 6320034 6320079 chrX 6320162 6320182 15 125 2.5 2.5 2.5 4.3 148 chrX 6320034 intron CG15894 + chrX 6320108 intron CG15894 + chrX 6320182 intron CG15894 + chrX_15_6320001 chrX_6320001 RAL-177 2743 chrX 6335222 6335244 chrX 6337752 6337769 Tirant 6 2524 0.0 8.5 4.2 1.2 2547 chrX 6335222 intergenic not near genes chrX 6336496 intergenic not near genes chrX 6337769 5` UTR CG3842 + chrX_6_6335001 chrX_6335001 RAL-177 2744 chrX 6392862 6392893 chrX 6397646 6397678 Doc 10 4784 5.5 1.0 3.2 2.4 4816 chrX 6392862 intergenic not near genes chrX 6395270 intergenic not near genes chrX 6397678 intergenic not near genes chrX_10_6395001 chrX_6395001 RAL-177 2745 chrX 6487967 6487982 chrX 6488061 6488084 4 100 3.5 5.0 4.2 0.8 117 chrX 6487967 intron CG42340 - chrX 6488026 intron CG42340 - chrX 6488084 intron CG42340 - chrX_4_6485001 chrX_6485001 RAL-177 2746 chrX 6562827 6562851 chrX 6571299 6571320 Tirant 7 8488 5.5 3.5 4.5 1.3 8493 chrX 6562827 intron CG34417 + chrX 6567074 intron CG34417 + chrX 6571320 intron CG34417 + chrX_7_6565001 chrX_6565001 RAL-177 2747 chrX 6591834 6591871 chrX 6591939 6591976 8 105 5.5 0.0 2.8 2.1 142 chrX 6591834 intron Pat1 + chrX 6591905 intron Pat1 + chrX 6591976 intron Pat1 + chrX_8_6590001 chrX_6590001 RAL-177 2748 chrX 6605471 6605483 chrX 6608514 6608526 Burdock 5 3043 3.5 2.0 2.8 1.3 3055 chrX 6605471 intron pigs + chrX 6606998 intron pigs + chrX 6608526 intron pigs + chrX_5_6605001 chrX_6605001 RAL-177 2749 chrX 6618445 6618463 chrX 6618543 6618561 4 96 5.0 7.0 6.0 0.6 116 chrX 6618445 intron pigs + chrX 6618503 intron pigs + chrX 6618561 intron pigs + chrX_4_6615001 chrX_6615001 RAL-177 2750 chrX 6629765 6629790 chrX 6629872 6629897 7 107 5.0 3.5 4.2 1.3 132 chrX 6629765 intron pigs + chrX 6629831 intron pigs + chrX 6629897 intron pigs + chrX_7_6625001 chrX_6625001 RAL-177 2751 chrX 6792079 6792092 chrX 6792174 6792195 5 103 0.5 3.0 1.8 1.8 116 chrX 6792079 intron C3G - chrX 6792137 intron C3G - chrX 6792195 intron C3G - chrX_5_6790001 chrX_6790001 RAL-177 2752 chrX 6794992 6795022 chrX 6795093 6795128 7 104 3.0 1.5 2.2 2.2 136 chrX 6794992 intron C3G - chrX 6795060 intron C3G - chrX 6795128 intron C3G - chrX_7_6795001 chrX_6795001 RAL-177 2753 chrX 6833063 6833115 chrX 6833235 6833287 15 171 1.0 1.5 1.2 6.8 224 chrX 6833063 intron nonC + chrX 6833175 intron nonC + chrX 6833287 intron nonC + chrX_15_6830001 chrX_6830001 RAL-177 2754 chrX 6897578 6897584 chrX 7243793 7243800 6 346216 1.5 7.5 4.5 1.1 346222 chrX 6897578 intergenic not near genes chrX 7070689 exon CG4607 + chrX 7243800 intron CR44357 - chrX_6_7070001 chrX_7070001 RAL-177 2755 chrX 6961670 6961686 chrX 6961767 6961783 7 97 1.0 0.0 0.5 4.7 113 chrX 6961670 intron,intron CG14431 +,CG32732 - chrX 6961726 intron,intron CG14431 +,CG32732 - chrX 6961783 intron,intron CG14431 +,CG32732 - chrX_7_6960001 chrX_6960001 RAL-177 2756 chrX 6989497 6989533 chrX 6989594 6989640 9 104 2.0 2.5 2.2 2.8 143 chrX 6989497 intron ogre - chrX 6989568 intron ogre - chrX 6989640 intron ogre - chrX_9_6985001 chrX_6985001 RAL-177 2757 chrX 7023583 7023625 chrX 7030993 7031010 Tabor 9 7406 4.0 3.0 3.5 2.0 7427 chrX 7023583 intron CG12541 - chrX 7027296 intron CG12541 - chrX 7031010 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-177 2758 chrX 7125230 7125275 chrX 7134409 7134429 roo 16 9177 0.5 3.5 2.0 5.3 9199 chrX 7125230 intergenic not near genes chrX 7129830 intergenic not near genes chrX 7134429 intergenic not near genes chrX_16_7125001 chrX_7125001 RAL-177 2759 chrX 7413102 7413132 chrX 7413532 7413562 8 430 1.5 5.5 3.5 1.8 460 chrX 7413102 exon CG42704 + chrX 7413332 intergenic CG42704 + chrX 7413562 intergenic CG42704 +,CG42705 + chrX_8_7410001 chrX_7410001 RAL-177 2760 chrX 7614934 7614980 chrX 7615095 7615141 10 159 4.0 3.0 3.5 2.2 207 chrX 7614934 intron ct + chrX 7615038 intron ct + chrX 7615141 intron ct + chrX_10_7615001 chrX_7615001 RAL-177 2761 chrX 7679920 7680123 chrX 7680193 7680220 5 135 4.0 8.0 6.0 0.7 300 chrX 7679920 intergenic CR45666 -,CR45667 - chrX 7680070 3` UTR CR45666 - chrX 7680220 3` UTR CR45666 - chrX_5_7680001 chrX_7680001 RAL-177 2762 chrX 7679851 7679888 chrX 7680449 7680499 12 607 19.0 30.5 24.8 0.5 648 chrX 7679851 intergenic CR45666 -,CR45667 - chrX 7680175 3` UTR CR45666 - chrX 7680499 3` UTR CR45666 - chrX_12_7680001 chrX_7680001 RAL-177 2763 chrX 7702890 7702929 chrX 7703349 7703388 jockey 15 457 8.0 11.5 9.8 1.4 498 chrX 7702890 intron CHES-1-like - chrX 7703139 intron CHES-1-like - chrX 7703388 intron CHES-1-like - chrX_15_7700001 chrX_7700001 RAL-177 2764 chrX 7832415 7832462 chrX 7832524 7832571 14 108 6.0 3.0 4.5 2.5 156 chrX 7832415 intron CG1402 + chrX 7832493 intron CG1402 + chrX 7832571 intron CG1402 + chrX_14_7830001 chrX_7830001 RAL-177 2765 chrX 7845710 7845755 chrX 7847215 7847266 hopper2 13 1510 3.5 5.0 4.2 2.5 1556 chrX 7845710 intergenic not near genes chrX 7846488 intergenic not near genes chrX 7847266 intergenic not near genes chrX_13_7845001 chrX_7845001 RAL-177 2766 chrX 7931584 7931605 chrX 7931689 7931710 6 105 6.0 3.5 4.8 1.0 126 chrX 7931584 intergenic CG10778 -,CG10777 - chrX 7931647 intergenic CG10778 -,CG10777 - chrX 7931710 intergenic CG10778 -,CG10777 - chrX_6_7930001 chrX_7930001 RAL-177 2767 chrX 7968519 7968522 chrX 7968668 7968671 4 149 0.0 14.0 7.0 0.5 152 chrX 7968519 intron sn + chrX 7968595 intron sn + chrX 7968671 intron sn + chrX_4_7965001 chrX_7965001 RAL-177 2768 chrX 8031411 8031454 chrX 8035740 8035783 Juan 17 4328 3.5 6.0 4.8 2.9 4372 chrX 8031411 intergenic not near genes chrX 8033597 intergenic not near genes chrX 8035783 3` UTR CG2233 - chrX_17_8030001 chrX_8030001 RAL-177 2769 chrX 8063715 8063770 chrX 8063834 8063887 11 117 4.5 3.5 4.0 2.2 172 chrX 8063715 intron mys + chrX 8063801 intron mys + chrX 8063887 5` UTR mys + chrX_11_8060001 chrX_8060001 RAL-177 2770 chrX 8079906 8079936 chrX 8080024 8080066 8 128 0.5 2.0 1.2 3.6 160 chrX 8079906 exon CG2254 - chrX 8079986 intron CG2254 - chrX 8080066 intron CG2254 - chrX_8_8075001 chrX_8075001 RAL-177 2771 chrX 8092277 8092310 chrX 8092382 8092415 11 105 3.5 4.5 4.0 2.2 138 chrX 8092277 intron Ubc-E2H - chrX 8092346 intron Ubc-E2H - chrX 8092415 intron Ubc-E2H - chrX_11_8090001 chrX_8090001 RAL-177 2772 chrX 8092312 8092322 chrX 8092380 8092427 6 99 3.0 4.5 3.8 1.2 115 chrX 8092312 intron Ubc-E2H - chrX 8092370 intron Ubc-E2H - chrX 8092427 intron Ubc-E2H - chrX_6_8090001 chrX_8090001 RAL-177 2773 chrX 8195010 8195025 chrX 8195119 8195119 4 105 0.0 0.0 0.0 4.0 109 chrX 8195010 intron sdt + chrX 8195064 intron sdt + chrX 8195119 intron sdt + chrX_4_8195001 chrX_8195001 RAL-177 2774 chrX 8305182 8305198 chrX 8305283 8305299 4 101 6.5 3.5 5.0 0.7 117 chrX 8305182 intron nAChRalpha3 - chrX 8305240 intron nAChRalpha3 - chrX 8305299 intron nAChRalpha3 - chrX_4_8305001 chrX_8305001 RAL-177 2775 chrX 8364834 8364874 chrX 8365251 8365291 BS 16 417 4.5 8.0 6.2 2.2 457 chrX 8364834 intron nAChRalpha3 - chrX 8365062 intron nAChRalpha3 - chrX 8365291 intron nAChRalpha3 - chrX_16_8365001 chrX_8365001 RAL-177 2776 chrX 8421481 8421492 chrX 8421563 8421604 7 108 2.5 4.5 3.5 1.6 123 chrX 8421481 intron Trf2 + chrX 8421542 intron Trf2 + chrX 8421604 intron Trf2 + chrX_7_8420001 chrX_8420001 RAL-177 2777 chrX 8500912 8500950 chrX 8501096 8501129 13 184 5.0 0.0 2.5 3.7 217 chrX 8500912 intron CG33181 + chrX 8501020 intron CG33181 + chrX 8501129 intron CG33181 + chrX_13_8500001 chrX_8500001 RAL-177 2778 chrX 8506510 8506561 chrX 8506737 8506754 7 221 3.5 1.0 2.2 2.2 244 chrX 8506510 intron CG33181 + chrX 8506632 intron CG33181 + chrX 8506754 intron CG33181 + chrX_7_8505001 chrX_8505001 RAL-177 2779 chrX 8544129 8544162 chrX 8544228 8544261 9 99 5.5 4.0 4.8 1.6 132 chrX 8544129 intron Nrg + chrX 8544195 intron Nrg + chrX 8544261 intron Nrg + chrX_9_8540001 chrX_8540001 RAL-177 2780 chrX 8727383 8727423 chrX 8727480 8727520 4 97 1.0 6.0 3.5 0.9 137 chrX 8727383 intergenic not near genes chrX 8727452 intergenic not near genes chrX 8727520 intergenic not near genes chrX_4_8725001 chrX_8725001 RAL-177 2781 chrX 8743248 8743259 chrX 8743346 8743357 4 97 3.5 3.5 3.5 0.9 109 chrX 8743248 intergenic not near genes chrX 8743302 intergenic not near genes chrX 8743357 intergenic not near genes chrX_4_8740001 chrX_8740001 RAL-177 2782 chrX 8772227 8772252 chrX 8772326 8772341 10 97 4.5 4.5 4.5 1.8 114 chrX 8772227 intron Lim1 - chrX 8772284 intron Lim1 - chrX 8772341 intron Lim1 - chrX_10_8770001 chrX_8770001 RAL-177 2783 chrX 8922317 8922353 chrX 8922765 8922807 jockey 13 448 1.5 4.5 3.0 3.2 490 chrX 8922317 intron rdgA + chrX 8922562 intron rdgA + chrX 8922807 intron rdgA + chrX_13_8920001 chrX_8920001 RAL-177 2784 chrX 8944893 8944925 chrX 8945140 8945172 9 246 2.5 4.0 3.2 2.1 279 chrX 8944893 intron rdgA + chrX 8945032 intron rdgA + chrX 8945172 intron rdgA + chrX_9_8945001 chrX_8945001 RAL-177 2785 chrX 8948737 8948778 chrX 8956267 8956308 roo 13 7530 1.5 5.5 3.5 2.9 7571 chrX 8948737 intron rdgA + chrX 8952522 intron rdgA + chrX 8956308 intron rdgA + chrX_13_8950001 chrX_8950001 RAL-177 2786 chrX 8971496 8971532 chrX 8971599 8971635 11 102 7.5 2.5 5.0 1.8 139 chrX 8971496 intron rdgA + chrX 8971566 intron rdgA + chrX 8971635 intron rdgA + chrX_11_8970001 chrX_8970001 RAL-177 2787 chrX 9047042 9047088 chrX 9047210 9047256 12 167 1.0 2.0 1.5 4.8 214 chrX 9047042 intron,intron CR43836 -,CG42388 + chrX 9047149 intron,intron CR43836 -,CG42388 + chrX 9047256 intron,intron CR43836 -,CG42388 + chrX_12_9045001 chrX_9045001 RAL-177 2788 chrX 9218059 9218078 chrX 9218170 9218187 5 111 11.5 0.0 5.8 0.7 128 chrX 9218059 3` UTR t - chrX 9218123 3` UTR t - chrX 9218187 3` UTR t - chrX_5_9215001 chrX_9215001 RAL-177 2789 chrX 9273000 9273045 chrX 9273101 9273146 21 100 1.0 6.0 3.5 4.7 146 chrX 9273000 intergenic Cfp1 -,CG16892 + chrX 9273073 intergenic Cfp1 -,CG16892 + chrX 9273146 intergenic Cfp1 -,CG16892 + chrX_21_9270001 chrX_9270001 RAL-177 2790 chrX 9377810 9377862 chrX 9377909 9377961 11 96 3.5 1.0 2.2 3.4 151 chrX 9377810 intron mgl - chrX 9377886 intron mgl - chrX 9377961 intron mgl - chrX_11_9375001 chrX_9375001 RAL-177 2791 chrX 9391554 9391593 chrX 9391720 9391759 15 164 5.0 3.5 4.2 2.9 205 chrX 9391554 intron mgl - chrX 9391656 intron mgl - chrX 9391759 intron mgl - chrX_15_9390001 chrX_9390001 RAL-177 2792 chrX 9403394 9403439 chrX 9403544 9403589 12 150 4.0 4.0 4.0 2.4 195 chrX 9403394 intron mgl - chrX 9403492 intron mgl - chrX 9403589 intron mgl - chrX_12_9400001 chrX_9400001 RAL-177 2793 chrX 9508120 9508160 chrX 9509658 9509698 jockey 18 1538 7.0 6.0 6.5 2.4 1578 chrX 9508120 intron CG32700 - chrX 9508909 intron CG32700 - chrX 9509698 intron CG32700 - chrX_18_9505001 chrX_9505001 RAL-177 2794 chrX 9575769 9575824 chrX 9576113 9576168 mdg3 18 341 3.5 3.0 3.2 4.3 399 chrX 9575769 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576168 intron,5` UTR CG32699 -,CG42395 - chrX_18_9575001 chrX_9575001 RAL-177 2795 chrX 9599165 9599192 chrX 9599259 9599290 7 94 4.0 3.0 3.5 1.6 125 chrX 9599165 intergenic not near genes chrX 9599228 intergenic not near genes chrX 9599290 intergenic not near genes chrX_7_9595001 chrX_9595001 RAL-177 2796 chrX 9758032 9758082 chrX 9758137 9758187 16 102 2.0 0.0 1.0 8.0 155 chrX 9758032 intergenic not near genes chrX 9758110 intergenic not near genes chrX 9758187 intergenic not near genes chrX_16_9755001 chrX_9755001 RAL-177 2797 chrX 9783065 9783240 chrX 9783165 9783317 8 92 4.5 8.5 6.5 1.1 252 chrX 9783065 intergenic CG32698 + chrX 9783191 intergenic CG32698 + chrX 9783317 5` UTR CG32698 + chrX_8_9780001 chrX_9780001 RAL-177 2798 chrX 9791846 9791889 chrX 9791963 9791980 9 114 5.0 3.0 4.0 1.8 134 chrX 9791846 intron CG32698 + chrX 9791913 intron CG32698 + chrX 9791980 intron CG32698 + chrX_9_9790001 chrX_9790001 RAL-177 2799 chrX 9816554 9816584 chrX 9816655 9816684 7 101 2.0 4.5 3.2 1.7 130 chrX 9816554 intron CG32698 + chrX 9816619 intron CG32698 + chrX 9816684 intron CG32698 + chrX_7_9815001 chrX_9815001 RAL-177 2800 chrX 9839327 9839371 chrX 9839430 9839473 5 102 0.0 1.5 0.8 2.8 146 chrX 9839327 intron CG32698 + chrX 9839400 intron CG32698 + chrX 9839473 intron CG32698 + chrX_5_9835001 chrX_9835001 RAL-177 2801 chrX 10138199 10138246 chrX 10145723 10145770 412 15 7524 6.0 6.0 6.0 2.1 7571 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145770 intron,intron RhoU +,CR44894 - chrX_15_10140001 chrX_10140001 RAL-177 2802 chrX 10216824 10216847 chrX 10216925 10216948 8 101 8.0 7.0 7.5 0.9 124 chrX 10216824 3` UTR l(1)G0230 + chrX 10216886 3` UTR l(1)G0230 + chrX 10216948 3` UTR l(1)G0230 + chrX_8_10215001 chrX_10215001 RAL-177 2803 chrX 10267297 10267334 chrX 10276467 10276504 roo 15 9170 1.5 5.0 3.2 3.6 9207 chrX 10267297 3` UTR alpha-Man-I - chrX 10271900 intron alpha-Man-I - chrX 10276504 3` UTR alpha-Man-I - chrX_15_10270001 chrX_10270001 RAL-177 2804 chrX 10317535 10317570 chrX 10317633 10317668 6 98 1.0 2.0 1.5 2.4 133 chrX 10317535 intron alpha-Man-I - chrX 10317602 intron alpha-Man-I - chrX 10317668 intron alpha-Man-I - chrX_6_10315001 chrX_10315001 RAL-177 2805 chrX 10348800 10348830 chrX 10356385 10356390 springer 11 7581 4.0 5.5 4.8 1.9 7590 chrX 10348800 intergenic snoRNA:U3:9B + chrX 10352595 intergenic not near genes chrX 10356390 intergenic l(1)G0289 - chrX_11_10350001 chrX_10350001 RAL-177 2806 chrX 10495541 10495582 chrX 10495638 10495680 6 91 1.0 3.5 2.2 1.9 139 chrX 10495541 intron spri - chrX 10495610 intron spri - chrX 10495680 intron spri - chrX_6_10495001 chrX_10495001 RAL-177 2807 chrX 10525056 10525067 chrX 10532144 10532158 297 4 7090 7.5 5.5 6.5 0.5 7102 chrX 10525056 intron spri - chrX 10528607 intron spri - chrX 10532158 intron spri - chrX_4_10525001 chrX_10525001 RAL-177 2808 chrX 10550315 10550363 chrX 10550413 10550461 23 97 4.0 4.0 4.0 4.6 146 chrX 10550315 intron spri - chrX 10550388 intron spri - chrX 10550461 intron spri - chrX_23_10550001 chrX_10550001 RAL-177 2809 chrX 10550848 10550885 chrX 10552335 10552367 hobo 8 1484 4.5 4.5 4.5 1.5 1519 chrX 10550848 intron spri - chrX 10551608 intron spri - chrX 10552367 intron spri - chrX_8_10550001 chrX_10550001 RAL-177 2810 chrX 10651610 10651646 chrX 10651746 10651782 16 134 0.0 4.5 2.2 5.0 172 chrX 10651610 intron X11Lbeta + chrX 10651696 intron X11Lbeta + chrX 10651782 intron X11Lbeta + chrX_16_10650001 chrX_10650001 RAL-177 2811 chrX 10686056 10686082 chrX 10691188 10691239 roo 5 5152 6.0 4.5 5.2 0.8 5183 chrX 10686056 intron X11Lbeta + chrX 10688648 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_5_10685001 chrX_10685001 RAL-177 2812 chrX 10920643 10920694 chrX 10920754 10920805 7 108 1.5 0.0 0.8 3.9 162 chrX 10920643 3` UTR CG43901 + chrX 10920724 3` UTR CG43901 + chrX 10920805 3` UTR CG43901 + chrX_7_10920001 chrX_10920001 RAL-177 2813 chrX 11005701 11005732 chrX 11005969 11006000 14 267 1.5 5.5 3.5 3.1 299 chrX 11005701 intron CG42339 - chrX 11005850 intron CG42339 - chrX 11006000 intron CG42339 - chrX_14_11005001 chrX_11005001 RAL-177 2814 chrX 11007217 11007260 chrX 11007323 11007366 11 105 3.0 1.0 2.0 3.7 149 chrX 11007217 intron CG42339 - chrX 11007292 intron CG42339 - chrX 11007366 intron CG42339 - chrX_11_11005001 chrX_11005001 RAL-177 2815 chrX 11034268 11034310 chrX 11034618 11034644 9 347 5.0 3.5 4.2 1.7 376 chrX 11034268 intron CG42339 - chrX 11034456 intron CG42339 - chrX 11034644 intron CG42339 - chrX_9_11030001 chrX_11030001 RAL-177 2816 chrX 11095982 11096015 chrX 11103104 11103137 HMS-Beagle 10 7122 8.5 7.0 7.8 1.1 7155 chrX 11095982 intergenic not near genes chrX 11099560 intergenic not near genes chrX 11103137 intron CG42249 + chrX_10_11095001 chrX_11095001 RAL-177 2817 chrX 11184228 11184249 chrX 11189327 11189348 flea 7 5098 4.0 3.0 3.5 1.6 5120 chrX 11184228 intergenic not near genes chrX 11186788 intergenic not near genes chrX 11189348 intergenic not near genes chrX_7_11185001 chrX_11185001 RAL-177 2818 chrX 11203598 11203625 chrX 11203694 11203721 9 96 0.5 5.0 2.8 2.4 123 chrX 11203598 intergenic not near genes chrX 11203660 intergenic not near genes chrX 11203721 intergenic not near genes chrX_9_11200001 chrX_11200001 RAL-177 2819 chrX 11268559 11268565 chrX 11270067 11270078 hopper2 4 1512 4.0 6.5 5.2 0.6 1519 chrX 11268559 intron CG44422 - chrX 11269318 intron CG44422 - chrX 11270078 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-177 2820 chrX 11268567 11268596 chrX 11270065 11270083 hopper2 5 1494 3.5 6.0 4.8 0.9 1516 chrX 11268567 intron CG44422 - chrX 11269325 intron CG44422 - chrX 11270083 intron CG44422 - chrX_5_11265001 chrX_11265001 RAL-177 2821 chrX 11312065 11312093 chrX 11319412 11319424 Stalker2 8 7356 4.0 3.0 3.5 1.8 7359 chrX 11312065 intergenic not near genes chrX 11315744 intergenic not near genes chrX 11319424 intergenic not near genes chrX_8_11315001 chrX_11315001 RAL-177 2822 chrX 11554857 11554911 chrX 11555253 11555307 11 396 28.0 34.5 31.2 0.3 450 chrX 11554857 3` UTR Drak + chrX 11555082 3` UTR CG1572 - chrX 11555307 3` UTR CG1572 - chrX_11_11555001 chrX_11555001 RAL-177 2823 chrX 11558258 11558284 chrX 11558362 11558388 5 104 8.0 0.5 4.2 1.0 130 chrX 11558258 intron CG1572 - chrX 11558323 intron CG1572 - chrX 11558388 intron CG1572 - chrX_5_11555001 chrX_11555001 RAL-177 2824 chrX 11572545 11572585 chrX 11572674 11572723 15 132 39.5 40.5 40.0 0.4 178 chrX 11572545 intergenic Kmn1 -,CG11697 + chrX 11572634 intergenic CG11697 +,Kmn1 - chrX 11572723 5` UTR CG11697 + chrX_15_11570001 chrX_11570001 RAL-177 2825 chrX 11633410 11633433 chrX 11640484 11640507 297 6 7074 4.5 5.5 5.0 1.0 7097 chrX 11633410 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640507 intron Ptp10D + chrX_6_11635001 chrX_11635001 RAL-177 2826 chrX 11645095 11645134 chrX 11648284 11648324 NOF 9 3189 2.5 4.5 3.5 2.0 3229 chrX 11645095 intron Ptp10D + chrX 11646710 intron Ptp10D + chrX 11648324 intron Ptp10D + chrX_9_11645001 chrX_11645001 RAL-177 2827 chrX 11804654 11804687 chrX 11804778 11804811 6 124 7.5 3.0 5.2 1.0 157 chrX 11804654 intron Hsc70-3 - chrX 11804732 intron Hsc70-3 - chrX 11804811 intron Hsc70-3 - chrX_6_11800001 chrX_11800001 RAL-177 2828 chrX 11917331 11917357 chrX 11917412 11917438 4 87 3.0 3.5 3.2 1.0 107 chrX 11917331 intergenic pot -,CR32661 - chrX 11917384 intergenic pot -,CR32661 - chrX 11917438 intergenic pot -,CR32661 - chrX_4_11915001 chrX_11915001 RAL-177 2829 chrX 11922346 11922382 chrX 11922502 11922538 5 153 1.5 2.5 2.0 1.7 192 chrX 11922346 exon Sclp - chrX 11922442 intron Sclp - chrX 11922538 intron Sclp - chrX_5_11920001 chrX_11920001 RAL-177 2830 chrX 12069037 12069086 chrX 12069144 12069193 5 102 3.5 4.0 3.8 1.0 156 chrX 12069037 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069115 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX 12069193 intron,intron,3` UTR CR43960 +,Ten-a +,CR43961 - chrX_5_12065001 chrX_12065001 RAL-177 2831 chrX 12094018 12094055 chrX 12094128 12094161 8 105 3.0 0.0 1.5 3.2 143 chrX 12094018 intron,intron CR43960 +,Ten-a + chrX 12094090 intron,intron CR43960 +,Ten-a + chrX 12094161 intron,intron CR43960 +,Ten-a + chrX_8_12090001 chrX_12090001 RAL-177 2832 chrX 12149802 12149842 chrX 12150075 12150115 9 272 2.5 2.0 2.2 2.8 313 chrX 12149802 intron Ten-a + chrX 12149958 intron Ten-a + chrX 12150115 intron Ten-a + chrX_9_12145001 chrX_12145001 RAL-177 2833 chrX 12150526 12150577 chrX 12150628 12150658 9 95 2.5 2.5 2.5 2.6 132 chrX 12150526 intron Ten-a + chrX 12150592 intron Ten-a + chrX 12150658 intron Ten-a + chrX_9_12150001 chrX_12150001 RAL-177 2834 chrX 12176723 12176769 chrX 12176812 12176865 12 90 1.5 2.5 2.0 4.0 142 chrX 12176723 intron,3` UTR Ten-a +,CG1924 - chrX 12176794 intron,3` UTR Ten-a +,CG1924 - chrX 12176865 intron,3` UTR Ten-a +,CG1924 - chrX_12_12175001 chrX_12175001 RAL-177 2835 chrX 12218440 12218456 chrX 12218558 12218565 5 116 3.0 3.0 3.0 1.2 125 chrX 12218440 intron Ten-a + chrX 12218502 intron Ten-a + chrX 12218565 intron Ten-a + chrX_5_12215001 chrX_12215001 RAL-177 2836 chrX 12241170 12241219 chrX 12241272 12241321 21 100 4.0 2.0 3.0 5.2 151 chrX 12241170 intron Ten-a + chrX 12241246 intron Ten-a + chrX 12241321 intron Ten-a + chrX_21_12240001 chrX_12240001 RAL-177 2837 chrX 12246955 12246985 chrX 12247071 12247101 4 116 5.0 3.0 4.0 0.8 146 chrX 12246955 intron Ten-a + chrX 12247028 intron Ten-a + chrX 12247101 intron Ten-a + chrX_4_12245001 chrX_12245001 RAL-177 2838 chrX 12272830 12272861 chrX 12272929 12272960 8 98 3.5 5.0 4.2 1.5 130 chrX 12272830 intron Ten-a + chrX 12272895 intron Ten-a + chrX 12272960 intron Ten-a + chrX_8_12270001 chrX_12270001 RAL-177 2839 chrX 12301939 12301970 chrX 12303263 12303294 X-element 5 1323 5.5 6.0 5.8 0.7 1355 chrX 12301939 intron Ten-a + chrX 12302616 intron Ten-a + chrX 12303294 intron Ten-a + chrX_5_12300001 chrX_12300001 RAL-177 2840 chrX 12350752 12350791 chrX 12350853 12350892 14 98 1.0 0.5 0.8 7.8 140 chrX 12350752 intergenic not near genes chrX 12350822 intergenic not near genes chrX 12350892 intergenic not near genes chrX_14_12350001 chrX_12350001 RAL-177 2841 chrX 12375470 12375500 chrX 12375588 12375618 11 118 1.5 3.0 2.2 3.4 148 chrX 12375470 intergenic Ir11a - chrX 12375544 intergenic Ir11a - chrX 12375618 exon Ir11a - chrX_11_12375001 chrX_12375001 RAL-177 2842 chrX 12381902 12381903 chrX 12385789 12385805 flea 5 3900 1.5 4.0 2.8 1.3 3903 chrX 12381902 intergenic not near genes chrX 12383854 intergenic not near genes chrX 12385805 intergenic not near genes chrX_5_12380001 chrX_12380001 RAL-177 2843 chrX 12430927 12430960 chrX 12431025 12431058 9 97 3.0 1.5 2.2 2.8 131 chrX 12430927 intergenic not near genes chrX 12430992 intergenic not near genes chrX 12431058 intergenic not near genes chrX_9_12430001 chrX_12430001 RAL-177 2844 chrX 12492978 12492989 chrX 13057292 13057302 6 564312 3.0 16.5 9.8 0.6 564324 chrX 12492978 3` UTR Lsp1alpha + chrX 12775140 3` UTR CG32647 - chrX 13057302 intron rad + chrX_6_12775001 chrX_12775001 RAL-177 2845 chrX 12511341 12511349 chrX 12511445 12511453 4 104 0.0 9.5 4.8 0.7 112 chrX 12511341 intron CG2556 + chrX 12511397 intron CG2556 + chrX 12511453 intron CG2556 + chrX_4_12510001 chrX_12510001 RAL-177 2846 chrX 12533769 12533823 chrX 12533866 12533906 11 94 0.0 3.5 1.8 3.9 137 chrX 12533769 intron CG43921 - chrX 12533838 intron CG43921 - chrX 12533906 intron CG43921 - chrX_11_12530001 chrX_12530001 RAL-177 2847 chrX 12537271 12537569 chrX 12537388 12537665 8 99 0.0 0.0 0.0 8.0 394 chrX 12537271 intron CG43921 - chrX 12537468 intron CG43921 - chrX 12537665 intron CG43921 - chrX_8_12535001 chrX_12535001 RAL-177 2848 chrX 12557449 12557480 chrX 12557550 12557581 5 101 2.5 0.0 1.2 2.3 132 chrX 12557449 intron CG43921 - chrX 12557515 intron CG43921 - chrX 12557581 intron CG43921 - chrX_5_12555001 chrX_12555001 RAL-177 2849 chrX 8326737 8326753 chrX 12649915 12649915 4 4323171 11.0 12.0 11.5 0.3 4323178 chrX 8326737 intron nAChRalpha3 - chrX 10488326 intergenic not near genes chrX 12649915 intron Tomosyn + chrX_4_10485001 chrX_10485001 RAL-177 2850 chrX 12737579 12737624 chrX 12737675 12737719 13 95 5.5 2.5 4.0 2.6 140 chrX 12737579 intron Smr - chrX 12737649 intron Smr - chrX 12737719 intron Smr - chrX_13_12735001 chrX_12735001 RAL-177 2851 chrX 12738500 12738542 chrX 12738596 12738638 10 95 3.0 5.5 4.2 1.9 138 chrX 12738500 intron Smr - chrX 12738569 intron Smr - chrX 12738638 intron Smr - chrX_10_12735001 chrX_12735001 RAL-177 2852 chrX 12752259 12752310 chrX 12752366 12752417 19 107 5.0 4.5 4.8 3.3 158 chrX 12752259 5` UTR CR44619 + chrX 12752338 5` UTR CR44619 + chrX 12752417 intron CR44619 + chrX_19_12750001 chrX_12750001 RAL-177 2853 chrX 12912608 12912655 chrX 12912725 12912771 9 117 3.0 3.5 3.2 2.1 163 chrX 12912608 5` UTR CR45625 + chrX 12912690 5` UTR CR45625 + chrX 12912771 5` UTR CR45625 + chrX_9_12910001 chrX_12910001 RAL-177 2854 chrX 12930580 12930606 chrX 12937716 12937740 HMS-Beagle 10 7135 8.0 14.5 11.2 0.8 7160 chrX 12930580 intron fne + chrX 12934160 intron fne + chrX 12937740 intron fne + chrX_10_12930001 chrX_12930001 RAL-177 2855 chrX 12946234 12946234 chrX 18572525 18572526 4 5626291 23.5 17.5 20.5 0.2 5626292 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572526 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-177 2856 chrX 12953901 12953906 chrX 12954058 12954064 5 158 3.0 7.5 5.2 0.8 163 chrX 12953901 intron hec - chrX 12953982 intron hec - chrX 12954064 intron hec - chrX_5_12950001 chrX_12950001 RAL-177 2857 chrX 12960746 12960796 chrX 12960847 12960897 19 101 6.0 8.5 7.2 2.3 151 chrX 12960746 3` UTR CG32642 + chrX 12960822 intergenic CG32642 + chrX 12960897 intergenic CG32642 + chrX_19_12960001 chrX_12960001 RAL-177 2858 chrX 13061243 13061277 chrX 13061356 13061388 7 112 3.0 3.5 3.2 1.7 145 chrX 13061243 intron rad + chrX 13061316 intron rad + chrX 13061388 intron rad + chrX_7_13060001 chrX_13060001 RAL-177 2859 chrX 13146577 13146631 chrX 13146685 13146739 12 108 1.5 2.5 2.0 4.0 162 chrX 13146577 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146739 intron CG32645 + chrX_12_13145001 chrX_13145001 RAL-177 2860 chrX 13161675 13161719 chrX 13161772 13161816 13 97 6.5 8.0 7.2 1.6 141 chrX 13161675 3` UTR CG12096 + chrX 13161746 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161816 3` UTR,3` UTR CG12096 +,CG34411 - chrX_13_13160001 chrX_13160001 RAL-177 2861 chrX 13227086 13227139 chrX 13227638 13227640 6 542 2.5 2.5 2.5 1.7 554 chrX 13227086 intron mew - chrX 13227363 intron mew - chrX 13227640 intron mew - chrX_6_13225001 chrX_13225001 RAL-177 2862 chrX 13236883 13236897 chrX 13236988 13237002 10 104 1.0 11.0 6.0 1.4 119 chrX 13236883 intron mew - chrX 13236942 intron mew - chrX 13237002 intron mew - chrX_10_13235001 chrX_13235001 RAL-177 2863 chrX 13271270 13271291 chrX 13271385 13271406 4 115 8.5 5.0 6.8 0.5 136 chrX 13271270 intron HDAC4 - chrX 13271338 intron HDAC4 - chrX 13271406 intron HDAC4 - chrX_4_13270001 chrX_13270001 RAL-177 2864 chrX 13272157 13272180 chrX 13272254 13272256 6 92 3.0 4.5 3.8 1.2 99 chrX 13272157 intron HDAC4 - chrX 13272206 intron HDAC4 - chrX 13272256 intron HDAC4 - chrX_6_13270001 chrX_13270001 RAL-177 2865 chrX 13278154 13278173 chrX 13278242 13278276 13 101 6.5 3.5 5.0 2.2 122 chrX 13278154 intron HDAC4 - chrX 13278215 intron HDAC4 - chrX 13278276 intron HDAC4 - chrX_13_13275001 chrX_13275001 RAL-177 2866 chrX 13321442 13321462 chrX 13321566 13321575 4 121 4.0 1.5 2.8 1.1 133 chrX 13321442 intron IP3K2 + chrX 13321508 intron IP3K2 + chrX 13321575 intron IP3K2 + chrX_4_13320001 chrX_13320001 RAL-177 2867 chrX 13401466 13401516 chrX 13401838 13401888 jockey 10 371 4.0 4.0 4.0 2.0 422 chrX 13401466 intergenic CG1673 +,CG12725 - chrX 13401677 intergenic CG12725 -,CG1673 + chrX 13401888 3` UTR CG12725 - chrX_10_13400001 chrX_13400001 RAL-177 2868 chrX 13429480 13429488 chrX 13430639 13430657 jockey 5 1164 0.0 6.5 3.2 1.2 1177 chrX 13429480 intergenic not near genes chrX 13430068 intergenic not near genes chrX 13430657 intergenic not near genes chrX_5_13430001 chrX_13430001 RAL-177 2869 chrX 13442121 13442166 chrX 13442232 13442277 10 110 0.5 3.0 1.8 3.6 156 chrX 13442121 intergenic not near genes chrX 13442199 intergenic not near genes chrX 13442277 intergenic not near genes chrX_10_13440001 chrX_13440001 RAL-177 2870 chrX 13443405 13443420 chrX 13443490 13443517 7 91 6.5 7.0 6.8 0.9 112 chrX 13443405 intergenic not near genes chrX 13443461 intergenic not near genes chrX 13443517 intergenic not near genes chrX_7_13440001 chrX_13440001 RAL-177 2871 chrX 13463629 13463675 chrX 13469226 13469257 mdg3 16 5592 2.0 1.5 1.8 5.7 5628 chrX 13463629 intron Neto + chrX 13466443 intron Neto + chrX 13469257 intron Neto + chrX_16_13465001 chrX_13465001 RAL-177 2872 chrX 13674626 13674672 chrX 13674731 13674777 17 105 4.5 7.0 5.8 2.5 151 chrX 13674626 3` UTR CG15760 + chrX 13674702 3` UTR CG15760 + chrX 13674777 3` UTR CG15760 + chrX_17_13670001 chrX_13670001 RAL-177 2873 chrX 13765779 13765824 chrX 13765951 13765996 13 171 4.0 3.0 3.5 2.9 217 chrX 13765779 intron rdgB + chrX 13765888 intron rdgB + chrX 13765996 intron rdgB + chrX_13_13765001 chrX_13765001 RAL-177 2874 chrX 13791144 13791169 chrX 13791316 13791341 5 172 4.0 0.0 2.0 1.7 197 chrX 13791144 intron inaE + chrX 13791242 intron inaE + chrX 13791341 intron inaE + chrX_5_13790001 chrX_13790001 RAL-177 2875 chrX 13795987 13796093 chrX 13799556 13799799 4 3672 2.0 13.0 7.5 0.5 3812 chrX 13795987 intron inaE + chrX 13797893 intron inaE + chrX 13799799 intron inaE + chrX_4_13795001 chrX_13795001 RAL-177 2876 chrX 13796271 13796290 chrX 13799914 13799933 6 3643 12.0 23.0 17.5 0.3 3662 chrX 13796271 intron inaE + chrX 13798102 intron inaE + chrX 13799933 intron inaE + chrX_6_13795001 chrX_13795001 RAL-177 2877 chrX 13841805 13841848 chrX 13842878 13842921 9 1073 2.0 1.5 1.8 3.2 1116 chrX 13841805 intron AMPdeam - chrX 13842363 intron AMPdeam - chrX 13842921 intron AMPdeam - chrX_9_13840001 chrX_13840001 RAL-177 2878 chrX 13934275 13934316 chrX 13934378 13934419 11 100 4.0 5.0 4.5 2.0 144 chrX 13934275 intron mamo - chrX 13934347 intron mamo - chrX 13934419 intron mamo - chrX_11_13930001 chrX_13930001 RAL-177 2879 chrX 13935501 13935521 chrX 13935598 13935624 11 102 4.5 6.0 5.2 1.8 123 chrX 13935501 intron mamo - chrX 13935562 intron mamo - chrX 13935624 intron mamo - chrX_11_13935001 chrX_13935001 RAL-177 2880 chrX 13937963 13938009 chrX 13941254 13941299 I-element 15 3289 2.0 0.5 1.2 6.8 3336 chrX 13937963 intron mamo - chrX 13939631 intron mamo - chrX 13941299 intron mamo - chrX_15_13935001 chrX_13935001 RAL-177 2881 chrX 13943272 13943300 chrX 13943383 13943406 4 110 0.0 3.0 1.5 1.6 134 chrX 13943272 intron mamo - chrX 13943339 intron mamo - chrX 13943406 intron mamo - chrX_4_13940001 chrX_13940001 RAL-177 2882 chrX 14105006 14105053 chrX 14114177 14114224 roo 17 9166 6.5 3.0 4.8 2.9 9218 chrX 14105006 intergenic not near genes chrX 14109615 intergenic not near genes chrX 14114224 5` UTR CR44657 + chrX_17_14105001 chrX_14105001 RAL-177 2883 chrX 14157574 14157599 chrX 14163251 14163276 297 11 5677 13.0 4.0 8.5 1.2 5702 chrX 14157574 intergenic not near genes chrX 14160425 intergenic not near genes chrX 14163276 intergenic not near genes chrX_11_14160001 chrX_14160001 RAL-177 2884 chrX 14209444 14209448 chrX 14209554 14209559 4 111 10.5 4.0 7.2 0.5 115 chrX 14209444 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209502 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209559 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-177 2885 chrX 14209457 14209472 chrX 14209568 14209583 7 111 6.0 7.5 6.8 0.9 126 chrX 14209457 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209520 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209583 intron,intron l(1)G0007 +,l(1)G0469 - chrX_7_14205001 chrX_14205001 RAL-177 2886 chrX 14209474 14209489 chrX 14209567 14209600 4 106 4.0 7.0 5.5 0.6 126 chrX 14209474 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209537 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209600 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-177 2887 chrX 14216781 14216786 chrX 14216886 14216891 7 105 3.5 1.0 2.2 2.2 110 chrX 14216781 intron l(1)G0007 + chrX 14216836 intron l(1)G0007 + chrX 14216891 intron l(1)G0007 + chrX_7_14215001 chrX_14215001 RAL-177 2888 chrX 14244960 14244962 chrX 14245062 14245065 4 102 3.5 7.5 5.5 0.6 105 chrX 14244960 intron CG32599 + chrX 14245012 intron CG32599 + chrX 14245065 intron CG32599 + chrX_4_14245001 chrX_14245001 RAL-177 2889 chrX 148679 148695 chrX 14291410 14291427 4 14142731 13.0 8.0 10.5 0.3 14142748 chrX 148679 intron tyn + chrX 7220053 intron,intron CG9650 +,CR44357 - chrX 14291427 intergenic not near genes chrX_4_7220001 chrX_7220001 RAL-177 2890 chrX 14404993 14405028 chrX 14405091 14405126 8 98 2.5 0.5 1.5 3.2 133 chrX 14404993 intron dpr8 + chrX 14405060 intron dpr8 + chrX 14405126 intron dpr8 + chrX_8_14405001 chrX_14405001 RAL-177 2891 chrX 14407250 14407277 chrX 14407352 14407379 8 102 0.0 4.0 2.0 2.7 129 chrX 14407250 intron dpr8 + chrX 14407314 intron dpr8 + chrX 14407379 intron dpr8 + chrX_8_14405001 chrX_14405001 RAL-177 2892 chrX 14416288 14416319 chrX 14421076 14421105 F-element 14 4788 5.5 6.0 5.8 2.1 4817 chrX 14416288 intron dpr8 + chrX 14418696 intron dpr8 + chrX 14421105 intron dpr8 + chrX_14_14415001 chrX_14415001 RAL-177 2893 chrX 14484958 14484995 chrX 14485067 14485104 12 108 0.0 6.5 3.2 2.9 146 chrX 14484958 intergenic not near genes chrX 14485031 intergenic not near genes chrX 14485104 intergenic not near genes chrX_12_14485001 chrX_14485001 RAL-177 2894 chrX 14597726 14597744 chrX 14597823 14597841 5 97 0.0 3.0 1.5 2.0 115 chrX 14597726 intron CG9413 - chrX 14597784 intron CG9413 - chrX 14597841 intron CG9413 - chrX_5_14595001 chrX_14595001 RAL-177 2895 chrX 14636457 14636491 chrX 14641903 14641951 I-element 11 5456 5.0 4.0 4.5 2.0 5494 chrX 14636457 intron NetA - chrX 14639204 intron NetA - chrX 14641951 intron NetA - chrX_11_14635001 chrX_14635001 RAL-177 2896 chrX 14714036 14714065 chrX 14714138 14714167 10 102 2.5 6.5 4.5 1.8 131 chrX 14714036 intron NetB - chrX 14714102 intron NetB - chrX 14714167 intron NetB - chrX_10_14710001 chrX_14710001 RAL-177 2897 chrX 14778018 14778054 chrX 14782835 14782871 Doc 13 4815 11.0 6.5 8.8 1.3 4853 chrX 14778018 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_13_14780001 chrX_14780001 RAL-177 2898 chrX 14818742 14818796 chrX 14823966 14824020 copia 7 5220 2.5 3.5 3.0 1.8 5278 chrX 14818742 intron rut - chrX 14821381 intron rut - chrX 14824020 intron rut - chrX_7_14820001 chrX_14820001 RAL-177 2899 chrX 14858728 14858782 chrX 14858889 14858932 4 158 4.5 2.5 3.5 0.9 204 chrX 14858728 intron Flo2 + chrX 14858830 intron Flo2 + chrX 14858932 intron Flo2 + chrX_4_14855001 chrX_14855001 RAL-177 2900 chrX 14922066 14922087 chrX 14922146 14922189 5 98 0.0 2.5 1.2 2.3 123 chrX 14922066 intron,intron Flo2 +,CG9503 - chrX 14922128 intron,intron Flo2 +,CG9503 - chrX 14922189 intron,intron Flo2 +,CG9503 - chrX_5_14920001 chrX_14920001 RAL-177 2901 chrX 14936841 14936889 chrX 14946118 14946166 roo 20 9277 7.0 5.0 6.0 2.9 9325 chrX 14936841 intron pdgy - chrX 14941504 intron pdgy - chrX 14946166 intron pdgy - chrX_20_14940001 chrX_14940001 RAL-177 2902 chrX 14968055 14968098 chrX 14968153 14968197 6 98 0.0 2.5 1.2 2.7 142 chrX 14968055 intron eag + chrX 14968126 intron eag + chrX 14968197 intron eag + chrX_6_14965001 chrX_14965001 RAL-177 2903 chrX 15151765 15151817 chrX 15151913 15151959 8 144 26.5 27.0 26.8 0.3 194 chrX 15151765 intron CG9095 - chrX 15151862 intron CG9095 - chrX 15151959 intron CG9095 - chrX_8_15150001 chrX_15150001 RAL-177 2904 chrX 15229307 15229346 chrX 15229398 15229443 9 94 2.5 2.5 2.5 2.6 136 chrX 15229307 exon CG9101 - chrX 15229375 intron CG9101 - chrX 15229443 exon CG9101 - chrX_9_15225001 chrX_15225001 RAL-177 2905 chrX 15318575 15318587 chrX 15318671 15318683 6 96 5.5 12.0 8.8 0.6 108 chrX 15318575 3` UTR gce + chrX 15318629 3` UTR gce + chrX 15318683 3` UTR gce + chrX_6_15315001 chrX_15315001 RAL-177 2906 chrX 15413038 15413081 chrX 15417356 15417403 Juan 12 4320 3.5 1.0 2.2 3.8 4365 chrX 15413038 intron Cngl - chrX 15415220 intron Cngl - chrX 15417403 intron Cngl - chrX_12_15415001 chrX_15415001 RAL-177 2907 chrX 15435693 15435704 chrX 15436140 15436157 rover 4 452 0.0 4.0 2.0 1.3 464 chrX 15435693 intron Cngl - chrX 15435925 intron Cngl - chrX 15436157 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-177 2908 chrX 15497576 15497614 chrX 15497686 15497695 8 104 1.5 1.0 1.2 3.6 119 chrX 15497576 intron,3` UTR Gmap +,CR44888 - chrX 15497636 intron,3` UTR Gmap +,CR44888 - chrX 15497695 intron,3` UTR Gmap +,CR44888 - chrX_8_15495001 chrX_15495001 RAL-177 2909 chrX 15580680 15580735 chrX 15580778 15580806 24 96 7.0 6.5 6.8 3.1 126 chrX 15580680 intergenic CG9215 - chrX 15580743 intergenic CG9215 - chrX 15580806 intergenic CG9215 - chrX_24_15580001 chrX_15580001 RAL-177 2910 chrX 15591194 15591197 chrX 15591257 15591293 4 88 0.0 5.0 2.5 1.1 99 chrX 15591194 intron CG9220 - chrX 15591244 intron CG9220 - chrX 15591293 intron CG9220 - chrX_4_15590001 chrX_15590001 RAL-177 2911 chrX 4275590 4275590 chrX 15627327 15627327 4 11351737 8.0 13.5 10.8 0.3 11351737 chrX 4275590 3` UTR CR45483 - chrX 9951458 intergenic not near genes chrX 15627327 intron sog - chrX_4_9950001 chrX_9950001 RAL-177 2912 chrX 15648194 15648243 chrX 15648733 15648782 10 537 3.0 2.5 2.8 2.6 588 chrX 15648194 intergenic not near genes chrX 15648488 intergenic not near genes chrX 15648782 intergenic not near genes chrX_10_15645001 chrX_15645001 RAL-177 2913 chrX 15696662 15696695 chrX 15696824 15696842 8 153 1.0 5.5 3.2 1.9 180 chrX 15696662 intergenic not near genes chrX 15696752 intergenic not near genes chrX 15696842 intergenic not near genes chrX_8_15695001 chrX_15695001 RAL-177 2914 chrX 15759497 15759530 chrX 15759593 15759626 11 96 5.5 2.5 4.0 2.2 129 chrX 15759497 intron Graf - chrX 15759562 intron Graf - chrX 15759626 intron Graf - chrX_11_15755001 chrX_15755001 RAL-177 2915 chrX 15939250 15939297 chrX 15939354 15939402 11 105 1.0 4.0 2.5 3.1 152 chrX 15939250 intron Stim - chrX 15939326 intron Stim - chrX 15939402 intron Stim - chrX_11_15935001 chrX_15935001 RAL-177 2916 chrX 16100545 16100591 chrX 16100643 16100691 5 100 2.5 1.0 1.8 1.8 146 chrX 16100545 intron,intron CG42353 -,CG42354 - chrX 16100618 intron,intron CG42353 -,CG42354 - chrX 16100691 intron,intron CG42353 -,CG42354 - chrX_5_16100001 chrX_16100001 RAL-177 2917 chrX 16146574 16146586 chrX 16146671 16146683 6 97 4.0 2.0 3.0 1.5 109 chrX 16146574 intron disco-r - chrX 16146628 intron disco-r - chrX 16146683 intron disco-r - chrX_6_16145001 chrX_16145001 RAL-177 2918 chrX 16176169 16176218 chrX 16176266 16176315 8 94 2.5 3.5 3.0 2.0 146 chrX 16176169 intergenic not near genes chrX 16176242 intergenic not near genes chrX 16176315 intergenic not near genes chrX_8_16175001 chrX_16175001 RAL-177 2919 chrX 16222758 16222810 chrX 16231128 16231140 roo 19 8368 1.0 4.5 2.8 5.0 8382 chrX 16222758 intergenic not near genes chrX 16226949 intergenic not near genes chrX 16231140 intergenic not near genes chrX_19_16225001 chrX_16225001 RAL-177 2920 chrX 16295505 16295542 chrX 16295609 16295636 12 103 9.5 0.0 4.8 2.1 131 chrX 16295505 intron CG9911 - chrX 16295570 intron CG9911 - chrX 16295636 intron CG9911 - chrX_12_16295001 chrX_16295001 RAL-177 2921 chrX 16340651 16340698 chrX 16349828 16349875 roo 12 9177 4.0 4.0 4.0 2.4 9224 chrX 16340651 intergenic Dsp1 + chrX 16345263 intergenic not near genes chrX 16349875 intergenic sl + chrX_12_16345001 chrX_16345001 RAL-177 2922 chrX 16492625 16492669 chrX 16498222 16498266 mdg3 16 5597 8.0 7.5 7.8 1.8 5641 chrX 16492625 intron para - chrX 16495446 intron para - chrX 16498266 intron para - chrX_16_16495001 chrX_16495001 RAL-177 2923 chrX 16529381 16529433 chrX 16529520 16529564 4 132 0.0 1.0 0.5 2.7 183 chrX 16529381 intron para - chrX 16529472 intron para - chrX 16529564 intron para - chrX_4_16525001 chrX_16525001 RAL-177 2924 chrX 16618033 16618067 chrX 16618144 16618178 5 109 4.5 6.0 5.2 0.8 145 chrX 16618033 intron CG9782 - chrX 16618106 intron CG9782 - chrX 16618178 intron CG9782 - chrX_5_16615001 chrX_16615001 RAL-177 2925 chrX 16650910 16650933 chrX 16651007 16651018 5 95 4.0 0.5 2.2 1.6 108 chrX 16650910 intergenic CG32573 +,CG42512 + chrX 16650964 intergenic CG32573 +,CG42512 + chrX 16651018 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-177 2926 chrX 16689603 16689656 chrX 16689709 16689725 11 96 0.5 2.5 1.5 4.4 122 chrX 16689603 intron Sep4 - chrX 16689664 intron Sep4 - chrX 16689725 intron Sep4 - chrX_11_16685001 chrX_16685001 RAL-177 2927 chrX 16690451 16690473 chrX 16690535 16690552 4 88 3.5 6.0 4.8 0.7 101 chrX 16690451 intron Sep4 - chrX 16690502 intron Sep4 - chrX 16690552 intron Sep4 - chrX_4_16690001 chrX_16690001 RAL-177 2928 chrX 16764718 16764732 chrX 16764815 16764829 4 97 9.0 1.5 5.2 0.6 111 chrX 16764718 intron if - chrX 16764774 intron if - chrX 16764829 intron if - chrX_4_16760001 chrX_16760001 RAL-177 2929 chrX 16821216 16821255 chrX 16821316 16821356 4 100 6.0 0.5 3.2 1.0 140 chrX 16821216 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821356 intron CG4829 + chrX_4_16820001 chrX_16820001 RAL-177 2930 chrX 16870059 16870098 chrX 16870161 16870201 7 102 4.0 4.0 4.0 1.4 142 chrX 16870059 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870201 intron CG13003 - chrX_7_16870001 chrX_16870001 RAL-177 2931 chrX 16891343 16891350 chrX 16891450 16891452 7 106 5.5 5.5 5.5 1.1 109 chrX 16891343 intergenic not near genes chrX 16891398 intergenic not near genes chrX 16891452 intergenic not near genes chrX_7_16890001 chrX_16890001 RAL-177 2932 chrX 16935990 16936029 chrX 16936428 16936435 jockey 6 433 9.5 6.0 7.8 0.7 445 chrX 16935990 intron CG4928 + chrX 16936212 intron CG4928 + chrX 16936435 intron CG4928 + chrX_6_16935001 chrX_16935001 RAL-177 2933 chrX 17011946 17011992 chrX 17012049 17012095 13 96 1.5 1.0 1.2 5.9 149 chrX 17011946 intron CG45002 - chrX 17012020 intron CG45002 - chrX 17012095 intron CG45002 - chrX_13_17010001 chrX_17010001 RAL-177 2934 chrX 17057916 17057965 chrX 17058177 17058226 pogo 12 260 1.0 4.0 2.5 3.4 310 chrX 17057916 intron CG45002 - chrX 17058071 intron CG45002 - chrX 17058226 intron CG45002 - chrX_12_17055001 chrX_17055001 RAL-177 2935 chrX 17063157 17063208 chrX 17063264 17063315 9 107 1.5 1.5 1.5 3.6 158 chrX 17063157 intron CG45002 - chrX 17063236 intron CG45002 - chrX 17063315 intron CG45002 - chrX_9_17060001 chrX_17060001 RAL-177 2936 chrX 17150791 17150826 chrX 17150962 17150997 11 171 5.5 7.0 6.2 1.5 206 chrX 17150791 intergenic CG5010 +,xmas-1 - chrX 17150894 intergenic CG5010 +,xmas-1 - chrX 17150997 intergenic xmas-1 -,CG5010 + chrX_11_17150001 chrX_17150001 RAL-177 2937 chrX 17195192 17195233 chrX 17200299 17200333 flea 16 5105 3.5 5.0 4.2 3.1 5141 chrX 17195192 3` UTR baz + chrX 17197762 3` UTR baz + chrX 17200333 3` UTR baz + chrX_16_17195001 chrX_17195001 RAL-177 2938 chrX 17237511 17237531 chrX 17237615 17237635 12 103 6.5 3.5 5.0 2.0 124 chrX 17237511 intron f + chrX 17237573 intron f + chrX 17237635 intron f + chrX_12_17235001 chrX_17235001 RAL-177 2939 chrX 17332488 17332496 chrX 17332585 17332593 4 97 0.0 6.0 3.0 1.0 105 chrX 17332488 intergenic not near genes chrX 17332540 intergenic not near genes chrX 17332593 intergenic not near genes chrX_4_17330001 chrX_17330001 RAL-177 2940 chrX 17337737 17337772 chrX 17338638 17338649 9 895 3.5 5.0 4.2 1.7 912 chrX 17337737 intergenic not near genes chrX 17338193 intergenic not near genes chrX 17338649 intergenic not near genes chrX_9_17335001 chrX_17335001 RAL-177 2941 chrX 17352591 17352619 chrX 17352714 17352742 15 122 0.0 10.0 5.0 2.5 151 chrX 17352591 intergenic not near genes chrX 17352666 intergenic not near genes chrX 17352742 intergenic not near genes chrX_15_17350001 chrX_17350001 RAL-177 2942 chrX 17357522 17357536 chrX 17357636 17357650 4 114 1.5 2.5 2.0 1.3 128 chrX 17357522 intergenic not near genes chrX 17357586 intergenic not near genes chrX 17357650 intergenic not near genes chrX_4_17355001 chrX_17355001 RAL-177 2943 chrX 17434408 17434426 chrX 17434521 17434539 5 113 7.5 0.0 3.8 1.0 131 chrX 17434408 intron CG12994 - chrX 17434474 intron CG12994 - chrX 17434539 intron CG12994 - chrX_5_17430001 chrX_17430001 RAL-177 2944 chrX 17435739 17435748 chrX 17435835 17435844 6 96 8.5 6.0 7.2 0.7 105 chrX 17435739 intron CG12994 - chrX 17435792 intron CG12994 - chrX 17435844 intron CG12994 - chrX_6_17435001 chrX_17435001 RAL-177 2945 chrX 17435752 17435783 chrX 17435827 17435844 7 88 5.0 5.0 5.0 1.2 92 chrX 17435752 intron CG12994 - chrX 17435798 intron CG12994 - chrX 17435844 intron CG12994 - chrX_7_17435001 chrX_17435001 RAL-177 2946 chrX 17488139 17488182 chrX 17488247 17488290 9 107 3.0 2.0 2.5 2.6 151 chrX 17488139 intron CG43658 - chrX 17488214 intron CG43658 - chrX 17488290 intron CG43658 - chrX_9_17485001 chrX_17485001 RAL-177 2947 chrX 17544986 17545033 chrX 17545088 17545135 12 100 4.5 3.5 4.0 2.4 149 chrX 17544986 intron CG43658 - chrX 17545060 intron CG43658 - chrX 17545135 intron CG43658 - chrX_12_17545001 chrX_17545001 RAL-177 2948 chrX 17586408 17586452 chrX 17586533 17586577 10 123 2.5 0.0 1.2 4.5 169 chrX 17586408 intron CG12991 + chrX 17586492 intron CG12991 + chrX 17586577 intron CG12991 + chrX_10_17585001 chrX_17585001 RAL-177 2949 chrX 17607236 17607290 chrX 17607378 17607432 13 136 1.5 3.0 2.2 4.1 196 chrX 17607236 intergenic X11L + chrX 17607334 intergenic X11L + chrX 17607432 intergenic not near genes chrX_13_17605001 chrX_17605001 RAL-177 2950 chrX 17716581 17716594 chrX 17716686 17716699 6 104 6.0 3.5 4.8 1.0 118 chrX 17716581 intron CG42684 + chrX 17716640 intron CG42684 + chrX 17716699 intron CG42684 + chrX_6_17715001 chrX_17715001 RAL-177 2951 chrX 17741322 17741369 chrX 17741488 17741535 9 165 0.0 4.5 2.2 2.8 213 chrX 17741322 intron CG42684 + chrX 17741428 intron CG42684 + chrX 17741535 intron CG42684 + chrX_9_17740001 chrX_17740001 RAL-177 2952 chrX 17766343 17766378 chrX 17766461 17766496 12 116 1.0 5.0 3.0 3.0 153 chrX 17766343 intergenic not near genes chrX 17766420 intergenic not near genes chrX 17766496 intergenic not near genes chrX_12_17765001 chrX_17765001 RAL-177 2953 chrX 18003432 18003480 chrX 18003534 18003580 13 98 3.5 0.5 2.0 4.3 148 chrX 18003432 intron Sh - chrX 18003506 intron Sh - chrX 18003580 intron Sh - chrX_13_18000001 chrX_18000001 RAL-177 2954 chrX 18029172 18029181 chrX 18029273 18029282 5 101 2.0 0.5 1.2 2.3 110 chrX 18029172 intron Sh - chrX 18029227 intron Sh - chrX 18029282 intron Sh - chrX_5_18025001 chrX_18025001 RAL-177 2955 chrX 18122800 18122851 chrX 18122896 18122947 20 95 4.5 7.0 5.8 2.9 147 chrX 18122800 5` UTR CR45606 + chrX 18122874 5` UTR CR45606 + chrX 18122947 intergenic CR45606 + chrX_20_18120001 chrX_18120001 RAL-177 2956 chrX 18148618 18148624 chrX 18148741 18148747 4 123 8.5 0.0 4.2 0.8 129 chrX 18148618 intergenic not near genes chrX 18148682 intergenic not near genes chrX 18148747 intergenic not near genes chrX_4_18145001 chrX_18145001 RAL-177 2957 chrX 18320485 18320499 chrX 18320637 18320651 7 152 0.0 4.5 2.2 2.2 166 chrX 18320485 intron CG6023 - chrX 18320568 intron CG6023 - chrX 18320651 intron CG6023 - chrX_7_18320001 chrX_18320001 RAL-177 2958 chrX 18347867 18347891 chrX 18350434 18350458 5 2567 27.0 9.0 18.0 0.3 2591 chrX 18347867 intron CG6123 - chrX 18349162 intron CG6123 - chrX 18350458 intron CG6123 - chrX_5_18345001 chrX_18345001 RAL-177 2959 chrX 18429478 18429519 chrX 18434805 18434850 Transpac 14 5331 4.5 3.5 4.0 2.8 5372 chrX 18429478 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434850 intergenic not near genes chrX_14_18430001 chrX_18430001 RAL-177 2960 chrX 18455213 18455241 chrX 18455313 18455341 9 99 2.5 4.0 3.2 2.1 128 chrX 18455213 intron CG32547 - chrX 18455277 intron CG32547 - chrX 18455341 intron CG32547 - chrX_9_18455001 chrX_18455001 RAL-177 2961 chrX 18490023 18490046 chrX 18490198 18490216 5 173 6.0 3.5 4.8 0.9 193 chrX 18490023 intergenic CG15046 - chrX 18490120 intergenic CG15046 - chrX 18490216 intergenic not near genes chrX_5_18490001 chrX_18490001 RAL-177 2962 chrX 18555359 18555409 chrX 18556900 18556951 transib2 5 1536 1.5 4.0 2.8 1.3 1592 chrX 18555359 intron Bx + chrX 18556155 intron Bx + chrX 18556951 intron Bx + chrX_5_18555001 chrX_18555001 RAL-177 2963 chrX 18576080 18576101 chrX 18576178 18576199 10 98 0.0 5.5 2.8 2.6 119 chrX 18576080 intergenic not near genes chrX 18576140 intergenic not near genes chrX 18576199 intergenic not near genes chrX_10_18575001 chrX_18575001 RAL-177 2964 chrX 18645006 18645046 chrX 18645124 18645164 10 118 2.5 5.5 4.0 2.0 158 chrX 18645006 intron Rip11 - chrX 18645085 intron Rip11 - chrX 18645164 intron Rip11 - chrX_10_18645001 chrX_18645001 RAL-177 2965 chrX 18698829 18698878 chrX 18698966 18699015 18 136 3.5 5.5 4.5 3.3 186 chrX 18698829 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699015 intergenic not near genes chrX_18_18695001 chrX_18695001 RAL-177 2966 chrX 18810882 18810922 chrX 18810980 18811008 8 100 2.5 3.5 3.0 2.0 126 chrX 18810882 exon CG7058 + chrX 18810945 3` UTR CG7058 + chrX 18811008 3` UTR CG7058 + chrX_8_18810001 chrX_18810001 RAL-177 2967 chrX 18896497 18896548 chrX 18896628 18896679 16 130 5.0 3.5 4.2 3.1 182 chrX 18896497 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896679 intergenic CG7349 + chrX_16_18895001 chrX_18895001 RAL-177 2968 chrX 18924439 18924469 chrX 18924534 18924545 4 91 6.5 5.0 5.8 0.6 106 chrX 18924439 intergenic not near genes chrX 18924492 intergenic not near genes chrX 18924545 intergenic not near genes chrX_4_18920001 chrX_18920001 RAL-177 2969 chrX 18926522 18926537 chrX 18926634 18926649 6 112 2.0 0.0 1.0 3.0 127 chrX 18926522 intergenic not near genes chrX 18926586 intergenic not near genes chrX 18926649 intergenic not near genes chrX_6_18925001 chrX_18925001 RAL-177 2970 chrX 18948975 18949026 chrX 18949706 18949757 7 734 27.0 25.0 26.0 0.3 782 chrX 18948975 intron CG43759 + chrX 18949366 intron CG43759 + chrX 18949757 intron CG43759 + chrX_7_18945001 chrX_18945001 RAL-177 2971 chrX 18953346 18953358 chrX 18953464 18953486 7 127 4.0 7.5 5.8 1.0 140 chrX 18953346 intron CG43759 + chrX 18953416 intron CG43759 + chrX 18953486 intron CG43759 + chrX_7_18950001 chrX_18950001 RAL-177 2972 chrX 18957050 18957100 chrX 18965733 18965783 roo 21 8682 4.5 5.5 5.0 3.5 8733 chrX 18957050 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965783 intron CG43759 + chrX_21_18960001 chrX_18960001 RAL-177 2973 chrX 18988161 18988212 chrX 18988266 18988317 13 96 4.0 2.5 3.2 3.1 156 chrX 18988161 intron CG43759 + chrX 18988239 intron CG43759 + chrX 18988317 intron CG43759 + chrX_13_18985001 chrX_18985001 RAL-177 2974 chrX 19036409 19036415 chrX 19036505 19036511 4 96 2.5 0.0 1.2 1.8 102 chrX 19036409 intergenic not near genes chrX 19036460 intergenic not near genes chrX 19036511 intergenic not near genes chrX_4_19035001 chrX_19035001 RAL-177 2975 chrX 19060391 19060435 chrX 19065195 19065239 Doc 6 4804 3.0 4.0 3.5 1.3 4848 chrX 19060391 intron CG14190 + chrX 19062815 intron CG14190 + chrX 19065239 intron CG14190 + chrX_6_19060001 chrX_19060001 RAL-177 2976 chrX 19098737 19098780 chrX 19098835 19098878 20 98 1.0 2.0 1.5 8.0 141 chrX 19098737 intergenic not near genes chrX 19098808 intergenic not near genes chrX 19098878 intergenic not near genes chrX_20_19095001 chrX_19095001 RAL-177 2977 chrX 19119681 19119711 chrX 19119787 19119817 16 106 10.0 0.0 5.0 2.7 136 chrX 19119681 intergenic not near genes chrX 19119749 intergenic not near genes chrX 19119817 intergenic not near genes chrX_16_19115001 chrX_19115001 RAL-177 2978 chrX 19136537 19136581 chrX 19143477 19143520 412 14 6935 5.0 4.5 4.8 2.4 6983 chrX 19136537 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143520 3` UTR RhoGAP18B - chrX_14_19140001 chrX_19140001 RAL-177 2979 chrX 19181994 19182043 chrX 19182126 19182175 18 131 3.5 4.5 4.0 3.6 181 chrX 19181994 3` UTR CG7453 + chrX 19182084 intergenic CG7453 + chrX 19182175 intergenic CG7453 + chrX_18_19180001 chrX_19180001 RAL-177 2980 chrX 19280998 19281016 chrX 19281147 19281165 8 149 0.0 3.5 1.8 2.9 167 chrX 19280998 intergenic CG8034 - chrX 19281082 intergenic CG8034 - chrX 19281165 intergenic CG8034 - chrX_8_19280001 chrX_19280001 RAL-177 2981 chrX 19308503 19308538 chrX 19308613 19308648 8 109 1.0 4.0 2.5 2.3 145 chrX 19308503 intergenic not near genes chrX 19308576 intergenic not near genes chrX 19308648 intergenic not near genes chrX_8_19305001 chrX_19305001 RAL-177 2982 chrX 19356977 19356986 chrX 19358438 19358447 NOF 4 1461 5.0 0.0 2.5 1.1 1470 chrX 19356977 intron kek5 + chrX 19357712 intron kek5 + chrX 19358447 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-177 2983 chrX 19380146 19380187 chrX 19380407 19380428 pogo 7 258 0.5 3.5 2.0 2.3 282 chrX 19380146 intron kek5 + chrX 19380287 intron kek5 + chrX 19380428 intron kek5 + chrX_7_19380001 chrX_19380001 RAL-177 2984 chrX 19437277 19437282 chrX 19444795 19444818 Idefix 4 7533 9.0 5.5 7.2 0.5 7541 chrX 19437277 intron kek5 + chrX 19441048 intron kek5 + chrX 19444818 intron kek5 + chrX_4_19440001 chrX_19440001 RAL-177 2985 chrX 19472115 19472156 chrX 19472705 19472724 jockey 7 579 1.5 6.0 3.8 1.5 609 chrX 19472115 intergenic kek5 + chrX 19472420 intergenic not near genes chrX 19472724 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-177 2986 chrX 19542116 19542166 chrX 19542234 19542284 13 118 3.0 1.5 2.2 4.1 168 chrX 19542116 intron CG32532 - chrX 19542200 intron CG32532 - chrX 19542284 intron CG32532 - chrX_13_19540001 chrX_19540001 RAL-177 2987 chrX 19543112 19543135 chrX 19543200 19543236 9 99 0.0 5.0 2.5 2.6 124 chrX 19543112 intron CG32532 - chrX 19543174 intron CG32532 - chrX 19543236 intron CG32532 - chrX_9_19540001 chrX_19540001 RAL-177 2988 chrX 19553482 19553498 chrX 19553578 19553594 5 96 5.5 9.5 7.5 0.6 112 chrX 19553482 intergenic not near genes chrX 19553538 intergenic not near genes chrX 19553594 intergenic not near genes chrX_5_19550001 chrX_19550001 RAL-177 2989 chrX 19593926 19593977 chrX 19594031 19594082 14 104 3.5 4.0 3.8 2.9 156 chrX 19593926 exon CG14205 + chrX 19594004 intron CG14205 + chrX 19594082 exon CG14205 + chrX_14_19590001 chrX_19590001 RAL-177 2990 chrX 19595712 19595744 chrX 19595821 19595853 15 109 2.5 6.5 4.5 2.7 141 chrX 19595712 intergenic CG14205 + chrX 19595782 intergenic CG14205 + chrX 19595853 intergenic CG14205 + chrX_15_19595001 chrX_19595001 RAL-177 2991 chrX 19662011 19662053 chrX 19662254 19662296 14 243 7.0 2.5 4.8 2.4 285 chrX 19662011 intron CG14223 - chrX 19662154 intron CG14223 - chrX 19662296 intron CG14223 - chrX_14_19660001 chrX_19660001 RAL-177 2992 chrX 19693736 19693771 chrX 19693841 19693876 10 105 6.5 0.5 3.5 2.2 140 chrX 19693736 intergenic Mer -,CG14229 - chrX 19693806 intergenic CG14229 -,Mer - chrX 19693876 intergenic CG14229 -,Mer - chrX_10_19690001 chrX_19690001 RAL-177 2993 chrX 19756105 19756136 chrX 19756211 19756226 5 103 4.0 2.5 3.2 1.2 121 chrX 19756105 intron Pmp70 + chrX 19756166 intron Pmp70 + chrX 19756226 intron Pmp70 + chrX_5_19755001 chrX_19755001 RAL-177 2994 chrX 19838490 19838525 chrX 19838588 19838610 6 93 7.5 6.5 7.0 0.8 120 chrX 19838490 intron pico - chrX 19838550 intron pico - chrX 19838610 intron pico - chrX_6_19835001 chrX_19835001 RAL-177 2995 chrX 19881435 19881449 chrX 19881536 19881550 4 101 10.5 3.5 7.0 0.5 115 chrX 19881435 intron Hers + chrX 19881492 intron Hers + chrX 19881550 intron Hers + chrX_4_19880001 chrX_19880001 RAL-177 2996 chrX 19881450 19881483 chrX 19881535 19881584 18 97 6.5 3.5 5.0 3.0 134 chrX 19881450 intron Hers + chrX 19881517 intron Hers + chrX 19881584 intron Hers + chrX_18_19880001 chrX_19880001 RAL-177 2997 chrX 19883752 19883768 chrX 19883857 19883863 8 101 6.0 2.5 4.2 1.5 111 chrX 19883752 intron Hers + chrX 19883808 intron Hers + chrX 19883863 intron Hers + chrX_8_19880001 chrX_19880001 RAL-177 2998 chrX 19883773 19883796 chrX 19883855 19883900 8 102 3.0 2.0 2.5 2.3 127 chrX 19883773 intron Hers + chrX 19883836 intron Hers + chrX 19883900 intron Hers + chrX_8_19880001 chrX_19880001 RAL-177 2999 chrX 19975808 19975828 chrX 19976060 19976080 7 250 7.0 9.0 8.0 0.8 272 chrX 19975808 intergenic not near genes chrX 19975944 intergenic not near genes chrX 19976080 intergenic not near genes chrX_7_19975001 chrX_19975001 RAL-177 3000 chrX 19981236 19981246 chrX 19981321 19981345 4 93 0.0 9.0 4.5 0.7 109 chrX 19981236 intergenic not near genes chrX 19981290 intergenic not near genes chrX 19981345 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-177 3001 chrX 19984524 19984571 chrX 19984627 19984661 15 97 1.5 4.5 3.0 3.8 137 chrX 19984524 intergenic not near genes chrX 19984592 intergenic not near genes chrX 19984661 intergenic not near genes chrX_15_19980001 chrX_19980001 RAL-177 3002 chrX 20041510 20041562 chrX 20041610 20041662 27 99 3.5 4.0 3.8 5.6 152 chrX 20041510 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041662 intron Dop2R - chrX_27_20040001 chrX_20040001 RAL-177 3003 chrX 20081986 20082027 chrX 20082088 20082118 8 100 2.5 2.0 2.2 2.5 132 chrX 20081986 intergenic not near genes chrX 20082052 intergenic not near genes chrX 20082118 intergenic not near genes chrX_8_20080001 chrX_20080001 RAL-177 3004 chrX 20144831 20144866 chrX 20145015 20145056 4 188 4.5 3.0 3.8 0.8 225 chrX 20144831 intergenic not near genes chrX 20144944 intergenic not near genes chrX 20145056 intergenic not near genes chrX_4_20140001 chrX_20140001 RAL-177 3005 chrX 20271489 20271522 chrX 20271596 20271634 12 112 2.5 0.0 1.2 5.5 145 chrX 20271489 intergenic not near genes chrX 20271562 intergenic not near genes chrX 20271634 intergenic not near genes chrX_12_20270001 chrX_20270001 RAL-177 3006 chrX 20312869 20312911 chrX 20312967 20313009 12 97 2.0 7.5 4.8 2.1 140 chrX 20312869 intron CG1504 - chrX 20312939 intron CG1504 - chrX 20313009 intron CG1504 - chrX_12_20310001 chrX_20310001 RAL-177 3007 chrX 20359122 20359136 chrX 20359220 20359234 4 98 8.5 4.0 6.2 0.6 112 chrX 20359122 intergenic not near genes chrX 20359178 intergenic not near genes chrX 20359234 intergenic not near genes chrX_4_20355001 chrX_20355001 RAL-177 3008 chrX 20359139 20359161 chrX 20359214 20359259 6 93 5.5 3.5 4.5 1.1 120 chrX 20359139 intergenic not near genes chrX 20359199 intergenic not near genes chrX 20359259 intergenic not near genes chrX_6_20355001 chrX_20355001 RAL-177 3009 chrX 20362148 20362166 chrX 20362508 20362526 4 359 2.5 3.5 3.0 1.0 378 chrX 20362148 intergenic not near genes chrX 20362337 intergenic not near genes chrX 20362526 intergenic not near genes chrX_4_20360001 chrX_20360001 RAL-177 3010 chrX 20369302 20369340 chrX 20369406 20369444 13 104 1.0 3.5 2.2 4.1 142 chrX 20369302 intergenic not near genes chrX 20369373 intergenic not near genes chrX 20369444 intergenic not near genes chrX_13_20365001 chrX_20365001 RAL-177 3011 chrX 20371552 20371564 chrX 20371650 20371662 5 98 1.5 3.0 2.2 1.6 110 chrX 20371552 intergenic not near genes chrX 20371607 intergenic not near genes chrX 20371662 intergenic not near genes chrX_5_20370001 chrX_20370001 RAL-177 3012 chrX 20374076 20374128 chrX 20374167 20374224 10 96 1.0 2.0 1.5 4.0 148 chrX 20374076 intergenic not near genes chrX 20374150 intergenic not near genes chrX 20374224 intergenic not near genes chrX_10_20370001 chrX_20370001 RAL-177 3013 chrX 20415057 20415066 chrX 20415153 20415162 4 96 7.5 4.5 6.0 0.6 105 chrX 20415057 intergenic not near genes chrX 20415110 intergenic not near genes chrX 20415162 intergenic not near genes chrX_4_20415001 chrX_20415001 RAL-177 3014 chrX 20443160 20443204 chrX 20443256 20443300 7 96 4.0 3.5 3.8 1.5 140 chrX 20443160 exon CG1695 + chrX 20443230 intron CG1695 + chrX 20443300 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-177 3015 chrX 20467995 20468036 chrX 20468104 20468131 6 107 2.5 0.0 1.2 2.7 136 chrX 20467995 intron GstT3 + chrX 20468063 intron GstT3 + chrX 20468131 intron GstT3 + chrX_6_20465001 chrX_20465001 RAL-177 3016 chrX 20484374 20484405 chrX 20484493 20484500 11 121 3.0 4.5 3.8 2.3 126 chrX 20484374 intron RhoGAP19D - chrX 20484437 intron RhoGAP19D - chrX 20484500 intron RhoGAP19D - chrX_11_20480001 chrX_20480001 RAL-177 3017 chrX 20493910 20493929 chrX 20494091 20494098 4 178 0.0 5.5 2.8 1.1 188 chrX 20493910 intron RhoGAP19D - chrX 20494004 intron RhoGAP19D - chrX 20494098 intron RhoGAP19D - chrX_4_20490001 chrX_20490001 RAL-177 3018 chrX 20504110 20504153 chrX 20505651 20505659 transib2 12 1537 9.0 8.0 8.5 1.3 1549 chrX 20504110 intron RhoGAP19D - chrX 20504884 intron RhoGAP19D - chrX 20505659 intron RhoGAP19D - chrX_12_20500001 chrX_20500001 RAL-177 3019 chrX 20528579 20528628 chrX 20528947 20528996 12 368 2.5 7.0 4.8 2.1 417 chrX 20528579 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20528996 intergenic not near genes chrX_12_20525001 chrX_20525001 RAL-177 3020 chrX 20546536 20546558 chrX 20546722 20546744 9 186 0.5 3.0 1.8 3.2 208 chrX 20546536 intron RunxB + chrX 20546640 intron RunxB + chrX 20546744 intron RunxB + chrX_9_20545001 chrX_20545001 RAL-177 3021 chrX 20578074 20578110 chrX 20578172 20578209 9 95 2.5 5.5 4.0 1.8 135 chrX 20578074 intergenic not near genes chrX 20578142 intergenic not near genes chrX 20578209 intergenic not near genes chrX_9_20575001 chrX_20575001 RAL-177 3022 chrX 20615128 20615138 chrX 20615233 20615243 6 105 4.0 0.0 2.0 2.0 115 chrX 20615128 intron RunxA - chrX 20615186 intron RunxA - chrX 20615243 intron RunxA - chrX_6_20615001 chrX_20615001 RAL-177 3023 chrX 20635413 20635447 chrX 20635599 20635622 9 185 3.5 6.0 4.8 1.6 209 chrX 20635413 intergenic not near genes chrX 20635518 intergenic not near genes chrX 20635622 intergenic not near genes chrX_9_20635001 chrX_20635001 RAL-177 3024 chrX 20710412 20710441 chrX 20710509 20710538 11 97 2.0 1.5 1.8 3.9 126 chrX 20710412 intergenic not near genes chrX 20710475 intergenic not near genes chrX 20710538 intergenic not near genes chrX_11_20710001 chrX_20710001 RAL-177 3025 chrX 20791540 20791815 chrX 20791660 20791911 9 112 5.0 3.5 4.2 1.7 371 chrX 20791540 intron shakB - chrX 20791726 intron shakB - chrX 20791911 intron shakB - chrX_9_20790001 chrX_20790001 RAL-177 3026 chrX 20836715 20836729 chrX 20844327 20844351 roo 4 7619 6.0 3.5 4.8 0.7 7636 chrX 20836715 intron shakB - chrX 20840533 intron shakB - chrX 20844351 intron shakB - chrX_4_20840001 chrX_20840001 RAL-177 3027 chrX 20915028 20915074 chrX 20915219 20915265 9 190 5.0 3.0 4.0 1.8 237 chrX 20915028 intron shakB - chrX 20915146 intron shakB - chrX 20915265 intron shakB - chrX_9_20915001 chrX_20915001 RAL-177 3028 chrX 20940711 20940749 chrX 20942200 20942233 hobo 8 1488 1.5 1.5 1.5 3.2 1522 chrX 20940711 intergenic not near genes chrX 20941472 intergenic not near genes chrX 20942233 intergenic not near genes chrX_8_20940001 chrX_20940001 RAL-177 3029 chrX 20956987 20957004 chrX 20962449 20962466 I-element 6 5462 0.5 11.5 6.0 0.9 5479 chrX 20956987 intergenic not near genes chrX 20959726 intergenic not near genes chrX 20962466 intergenic Ser6 - chrX_6_20955001 chrX_20955001 RAL-177 3030 chrX 20974184 20974204 chrX 20974388 20974408 5 204 2.5 5.0 3.8 1.0 224 chrX 20974184 intergenic not near genes chrX 20974296 intergenic not near genes chrX 20974408 intergenic not near genes chrX_5_20970001 chrX_20970001 RAL-177 3031 chrX 21020069 21020106 chrX 21020182 21020214 11 112 6.5 0.0 3.2 2.6 145 chrX 21020069 intergenic not near genes chrX 21020142 intergenic not near genes chrX 21020214 intergenic not near genes chrX_11_21020001 chrX_21020001 RAL-177 3032 chrX 21029559 21029688 chrX 21029662 21029841 10 125 0.5 0.0 0.2 8.3 282 chrX 21029559 3` UTR CG1529 - chrX 21029700 3` UTR CG1529 - chrX 21029841 3` UTR CG1529 - chrX_10_21025001 chrX_21025001 RAL-177 3033 chrX 21049233 21049249 chrX 21049333 21049349 4 100 4.0 3.5 3.8 0.8 116 chrX 21049233 intergenic Cbs + chrX 21049291 intergenic Cbs + chrX 21049349 intergenic Cbs + chrX_4_21045001 chrX_21045001 RAL-177 3034 chrX 21049736 21049751 chrX 21049840 21049855 4 104 1.0 11.5 6.2 0.6 119 chrX 21049736 intergenic CG1518 - chrX 21049796 intergenic CG1518 - chrX 21049855 intergenic CG1518 - chrX_4_21045001 chrX_21045001 RAL-177 3035 chrX 21055673 21055720 chrX 21055769 21055777 17 93 5.0 1.5 3.2 4.0 104 chrX 21055673 intron bves + chrX 21055725 intron bves + chrX 21055777 intron bves + chrX_17_21055001 chrX_21055001 RAL-177 3036 chrX 21061865 21061875 chrX 21062354 21062378 roo 5 500 9.0 6.0 7.5 0.6 513 chrX 21061865 intron bves + chrX 21062122 intron bves + chrX 21062378 intron,3` UTR bves +,CG32512 - chrX_5_21060001 chrX_21060001 RAL-177 3037 chrX 21061876 21061891 chrX 21062350 21062396 roo 4 496 5.0 5.0 5.0 0.7 520 chrX 21061876 intron bves + chrX 21062136 intron bves + chrX 21062396 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 RAL-177 3038 chrX 21065077 21065115 chrX 21065162 21065187 14 88 1.0 3.0 2.0 4.7 110 chrX 21065077 intron,intron bves +,CG32512 - chrX 21065132 intron,intron bves +,CG32512 - chrX 21065187 intron,intron bves +,CG32512 - chrX_14_21065001 chrX_21065001 RAL-177 3039 chrX 21078764 21078780 chrX 21078862 21078870 5 96 4.5 0.0 2.2 1.6 106 chrX 21078764 intron bves + chrX 21078817 intron bves + chrX 21078870 intron bves + chrX_5_21075001 chrX_21075001 RAL-177 3040 chrX 21084533 21084581 chrX 21085068 21085116 5 531 2.0 4.0 3.0 1.2 583 chrX 21084533 intergenic not near genes chrX 21084824 intergenic not near genes chrX 21085116 intergenic not near genes chrX_5_21080001 chrX_21080001 RAL-177 3041 chrX 21086150 21086156 chrX 21087159 21087205 jockey 6 1042 2.0 2.5 2.2 1.9 1055 chrX 21086150 intergenic not near genes chrX 21086678 intergenic not near genes chrX 21087205 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-177 3042 chrX 21088047 21088068 chrX 21088174 21088210 7 136 2.5 1.5 2.0 2.3 163 chrX 21088047 intergenic not near genes chrX 21088128 intergenic not near genes chrX 21088210 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-177 3043 chrX 21140894 21140909 chrX 21140996 21141011 8 102 5.5 3.5 4.5 1.5 117 chrX 21140894 3` UTR CG34120 + chrX 21140952 intergenic CG34120 + chrX 21141011 intergenic CG34120 + chrX_8_21140001 chrX_21140001 RAL-177 3044 chrX 21190560 21190818 chrX 21190736 21190898 9 157 0.0 0.0 0.0 9.0 338 chrX 21190560 intergenic not near genes chrX 21190729 intergenic not near genes chrX 21190898 intergenic not near genes chrX_9_21190001 chrX_21190001 RAL-177 3045 chrX 21303184 21303221 chrX 21303294 21303331 13 109 4.0 6.0 5.0 2.2 147 chrX 21303184 intron CG1718 - chrX 21303258 intron CG1718 - chrX 21303331 intron CG1718 - chrX_13_21300001 chrX_21300001 RAL-177 3046 chrX 21328101 21328148 chrX 21328232 21328279 16 130 6.0 3.5 4.8 2.8 178 chrX 21328101 3` UTR CG1486 + chrX 21328190 intergenic CG1486 +,tty - chrX 21328279 intergenic CG1486 +,tty - chrX_16_21325001 chrX_21325001 RAL-177 3047 chrX 21398866 21398908 chrX 21398963 21399005 16 97 6.0 2.0 4.0 3.2 139 chrX 21398866 intergenic not near genes chrX 21398936 intergenic not near genes chrX 21399005 intergenic not near genes chrX_16_21395001 chrX_21395001 RAL-177 3048 chrX 21400603 21400640 chrX 21400701 21400738 13 96 5.0 3.0 4.0 2.6 135 chrX 21400603 3` UTR CR45500 - chrX 21400670 3` UTR CR45500 - chrX 21400738 3` UTR CR45500 - chrX_13_21400001 chrX_21400001 RAL-177 3049 chrX 21410649 21410671 chrX 21410749 21410771 9 100 0.5 7.5 4.0 1.8 122 chrX 21410649 intergenic CR45003 - chrX 21410710 intergenic CR45003 - chrX 21410771 intergenic CR45003 - chrX_9_21410001 chrX_21410001 RAL-177 3050 chrX 21458696 21458727 chrX 21464152 21464183 Ivk 9 5453 0.5 9.0 4.8 1.6 5487 chrX 21458696 intergenic not near genes chrX 21461440 intergenic not near genes chrX 21464183 intergenic not near genes chrX_9_21460001 chrX_21460001 RAL-177 3051 chrX 21565403 21565439 chrX 21565492 21565537 12 96 3.5 1.5 2.5 3.4 134 chrX 21565403 intergenic not near genes chrX 21565470 intergenic not near genes chrX 21565537 intergenic not near genes chrX_12_21565001 chrX_21565001 RAL-177 3052 chrX 21581536 21581574 chrX 21581637 21581675 10 98 2.0 0.0 1.0 5.0 139 chrX 21581536 intergenic not near genes chrX 21581606 intergenic not near genes chrX 21581675 intergenic not near genes chrX_10_21580001 chrX_21580001 RAL-177 3053 chrX 21592134 21592146 chrX 21592234 21592247 5 100 7.0 4.5 5.8 0.7 113 chrX 21592134 intergenic not near genes chrX 21592190 intergenic not near genes chrX 21592247 intergenic not near genes chrX_5_21590001 chrX_21590001 RAL-177 3054 chrX 21668239 21668290 chrX 21668344 21668394 15 103 3.0 0.5 1.8 5.4 155 chrX 21668239 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668394 intergenic not near genes chrX_15_21665001 chrX_21665001 RAL-177 3055 chrX 22259782 22259797 chrX 22260223 22260227 rover 4 438 118.0 10.5 64.2 0.1 445 chrX 22259782 intergenic not near genes chrX 22260004 intergenic not near genes chrX 22260227 intergenic not near genes chrX_4_22260001 chrX_22260001 RAL-177 3056 chrX 22478870 22478895 chrX 22479023 22479048 9 153 0.0 1.5 0.8 5.0 178 chrX 22478870 intron CG12576 - chrX 22478959 intron CG12576 - chrX 22479048 intron CG12576 - chrX_9_22475001 chrX_22475001 RAL-177 3057 chrX 22522622 22522638 chrX 22525461 22525478 NOF 7 2840 3.5 1.5 2.5 2.0 2856 chrX 22522622 intron CG17600 + chrX 22524050 intron CG17600 + chrX 22525478 intron CG17600 + chrX_7_22520001 chrX_22520001 RAL-177 3058 chrX 22544416 22544436 chrX 22544516 22544536 9 100 8.0 6.0 7.0 1.1 120 chrX 22544416 intergenic CG17599 - chrX 22544476 intergenic CG17599 - chrX 22544536 intergenic CG17599 - chrX_9_22540001 chrX_22540001 RAL-177 3059 chrX 22564563 22564579 chrX 22575115 22575131 jockey 4 10556 9.0 15.0 12.0 0.3 10568 chrX 22564563 intergenic not near genes chrX 22569847 intergenic not near genes chrX 22575131 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-177 3060 chrX 22620483 22620515 chrX 22626767 22626799 297 6 6284 1.5 3.0 2.2 1.9 6316 chrX 22620483 intron Cda4 - chrX 22623641 intron Cda4 - chrX 22626799 intron Cda4 - chrX_6_22620001 chrX_22620001 RAL-177 3061 chrX 22677287 22677324 chrX 22677507 22677550 6 227 2.5 4.0 3.2 1.4 263 chrX 22677287 intron CR44997 + chrX 22677418 intron CR44997 + chrX 22677550 intron CR44997 + chrX_6_22675001 chrX_22675001 RAL-177 3062 chrX 22694303 22694352 chrX 22694413 22694463 8 110 0.5 1.0 0.8 4.4 160 chrX 22694303 intron CR44997 + chrX 22694383 intron CR44997 + chrX 22694463 intron CR44997 + chrX_8_22690001 chrX_22690001 RAL-177 3063 chrX 22697479 22697517 chrX 22701796 22701834 Juan 11 4316 5.0 3.5 4.2 2.1 4355 chrX 22697479 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701834 intron CR44997 + chrX_11_22695001 chrX_22695001 RAL-177 3064 chrX 22763612 22763638 chrX 22763708 22763724 5 97 4.0 2.0 3.0 1.2 112 chrX 22763612 intron CR44997 + chrX 22763668 intron CR44997 + chrX 22763724 intron CR44997 + chrX_5_22760001 chrX_22760001 RAL-177 3065 chrX 22771496 22771521 chrX 22774799 22774822 297 7 3308 6.5 1.0 3.8 1.5 3326 chrX 22771496 intron CR44997 + chrX 22773159 intron CR44997 + chrX 22774822 intron CR44997 + chrX_7_22770001 chrX_22770001 RAL-177 3066 chrX 22797013 22797023 chrX 22797113 22797128 6 104 0.0 9.0 4.5 1.1 115 chrX 22797013 intron CR44997 + chrX 22797070 intron CR44997 + chrX 22797128 intron CR44997 + chrX_6_22795001 chrX_22795001 RAL-177 3067 chrX 22811981 22812005 chrX 22816774 22816798 F-element 11 4793 8.5 6.5 7.5 1.3 4817 chrX 22811981 intergenic CG12446 - chrX 22814390 intergenic not near genes chrX 22816798 intergenic not near genes chrX_11_22810001 chrX_22810001 RAL-177 3068 chrX 22824234 22824445 chrX 22824380 22824598 30 150 3.5 4.0 3.8 6.2 364 chrX 22824234 intergenic fog - chrX 22824416 3` UTR fog - chrX 22824598 3` UTR fog - chrX_30_22820001 chrX_22820001 RAL-177 3069 chrX 22922497 22922543 chrX 22922597 22922631 12 94 2.0 3.5 2.8 3.2 134 chrX 22922497 intergenic not near genes chrX 22922564 intergenic not near genes chrX 22922631 intergenic not near genes chrX_12_22920001 chrX_22920001 RAL-177 3070 chrX 22987087 22987123 chrX 22989766 22989802 Burdock 14 2677 5.5 7.5 6.5 1.9 2715 chrX 22987087 intron,intron stnA -,stnB - chrX 22988444 intron,intron stnA -,stnB - chrX 22989802 intron,intron stnA -,stnB - chrX_14_22985001 chrX_22985001 RAL-177 3071 chrX 22996296 22996335 chrX 23003550 23003589 roo 9 7252 3.5 4.5 4.0 1.8 7293 chrX 22996296 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003589 intron,intron stnA -,stnB - chrX_9_22995001 chrX_22995001 RAL-177 3072 chrY 975795 975819 chrY 975895 976004 5 111 61.0 103.0 82.0 0.1 209 chrY 975795 intergenic not near genes chrY 975900 intergenic not near genes chrY 976004 intergenic not near genes chrY_5_975001 chrY_975001 RAL-177 3073 chrY 1419884 1419928 chrY 1420158 1420187 12 270 9.5 11.5 10.5 1.0 303 chrY 1419884 intergenic not near genes chrY 1420036 intergenic not near genes chrY 1420187 intergenic not near genes chrY_12_1420001 chrY_1420001 RAL-177 3074 chrY 1420641 1420650 chrY 1420767 1420776 6 126 13.0 15.5 14.2 0.4 135 chrY 1420641 intergenic not near genes chrY 1420708 intergenic not near genes chrY 1420776 intergenic not near genes chrY_6_1420001 chrY_1420001 RAL-177 3075 chrY 2447721 2447735 chrY 2448316 2448330 opus 4 595 0.0 0.0 0.0 4.0 609 chrY 2447721 intergenic not near genes chrY 2448026 intergenic not near genes chrY 2448330 intergenic not near genes chrY_4_2445001 chrY_2445001 RAL-177