SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 309558 309893 mdg3 5257 186 16 335 '14-2 67.20 8.4 1.7 intron Plc21C + chr2L_16_305001 chr2L_305001 0.88 RAL-176 2 chr2L 371009 371127 mdg3 5270 5473 12 118 '11-1 64.35 11.3 1.0 intergenic not near genes chr2L_12_370001 chr2L_370001 0.92 RAL-176 3 chr2L 493997 494077 roo 2 410 27 80 '12-15 64.92 4.2 5.2 intron ush + chr2L_27_490001 chr2L_490001 0.44 RAL-176 4 chr2L 769975 770056 roo 414 5 9 81 '6-3 69.28 3.5 2.0 intergenic not near genes chr2L_9_765001 chr2L_765001 0.67 RAL-176 5 chr2L 892671 892797 roo 15 8630 4 126 '3-1 63.19 10.6 0.3 intergenic not near genes chr2L_4_890001 chr2L_890001 0.75 RAL-176 6 chr2L 1291033 1291187 412 5 331 32 154 '30-2 66.59 7.3 3.9 intron robo3 + chr2L_32_1290001 chr2L_1290001 0.94 RAL-176 7 chr2L 1720820 1720901 Transpac 4920 311 27 81 '5-22 69.26 7.6 3.1 intron Rim2 - chr2L_27_1720001 chr2L_1720001 0.19 RAL-176 8 chr2L 2014782 2014957 jockey 4700 4787 12 175 '11-1 61.27 9.4 1.2 intron CG4238 + chr2L_12_2010001 chr2L_2010001 0.92 RAL-176 9 chr2L 2506092 2506369 opus 7093 499 20 277 '1-19 71.23 5.3 3.2 intergenic not near genes chr2L_20_2505001 chr2L_2505001 0.05 RAL-176 10 chr2L 2859030 2859117 Tirant 403 8107 30 87 '18-12 65.55 6.8 3.8 intron CG2991 + chr2L_30_2855001 chr2L_2855001 0.60 RAL-176 11 chr2L 3000296 3000321 Tirant 495 471 6 25 '2-4 62.94 34.4 0.2 intron CG17265 + chr2L_6_3000001 chr2L_3000001 0.33 RAL-176 12 chr2L 3124986 3125069 HMS-Beagle 247 6796 70 83 '37-33 63.10 14.6 4.5 intron toc - chr2L_70_3120001 chr2L_3120001 0.53 RAL-176 13 chr2L 3130723 3131003 hobo 2 2925 24 280 '1-23 63.53 6.0 3.4 intron toc - chr2L_24_3130001 chr2L_3130001 0.04 RAL-176 14 chr2L 3601169 3601645 blood 7387 7054 10 476 '9-1 65.77 6.5 1.3 intergenic not near genes chr2L_10_3600001 chr2L_3600001 0.90 RAL-176 15 chr2L 3741565 3741648 roo 409 8662 22 83 '10-12 68.53 4.5 4.0 intron CG10019 + chr2L_22_3740001 chr2L_3740001 0.45 RAL-176 16 chr2L 3895499 3895578 297 2 393 9 79 '7-2 64.70 5.3 1.4 intron capu - chr2L_9_3895001 chr2L_3895001 0.78 RAL-176 17 chr2L 3960417 3960444 jockey 29 9 11 27 '4-7 69.37 8.1 1.2 intron fred - chr2L_11_3960001 chr2L_3960001 0.36 RAL-176 18 chr2L 4009440 4009705 pogo 2098 40 14 265 '13-1 66.36 3.4 3.2 intergenic CG43774 + chr2L_14_4005001 chr2L_4005001 0.93 RAL-176 19 chr2L 4124789 4124850 hopper 1414 1174 9 61 '7-2 64.79 3.9 1.8 intergenic not near genes chr2L_9_4120001 chr2L_4120001 0.78 RAL-176 20 chr2L 4659183 4659496 roo 8664 404 24 313 '23-1 68.44 6.7 3.1 intergenic not near genes chr2L_24_4655001 chr2L_4655001 0.96 RAL-176 21 chr2L 4820834 4820890 hobo 6 2927 15 56 '12-3 63.78 5.9 2.2 intergenic not near genes chr2L_15_4820001 chr2L_4820001 0.80 RAL-176 22 chr2L 5230023 5230297 roo 9038 1 36 274 '1-35 68.21 9.3 3.5 intron tkv - chr2L_36_5230001 chr2L_5230001 0.03 RAL-176 23 chr2L 5569322 5569396 hobo 2938 3 25 74 '4-21 65.27 9.3 2.4 intergenic not near genes chr2L_25_5565001 chr2L_5565001 0.16 RAL-176 24 chr2L 5689282 5689537 jockey 4967 4987 4 255 '3-1 61.97 4.9 0.7 intergenic not near genes chr2L_4_5685001 chr2L_5685001 0.75 RAL-176 25 chr2L 5960708 5960735 Juan 4104 4131 8 27 '5-3 62.26 6.0 1.1 intergenic Vm26Aa - chr2L_8_5960001 chr2L_5960001 0.62 RAL-176 26 chr2L 6889996 6890071 hopper 1412 1412 21 75 '12-9 62.56 5.8 3.1 intron Nlg2 + chr2L_21_6885001 chr2L_6885001 0.57 RAL-176 27 chr2L 7351177 7351194 Quasimodo 122 123 4 17 '1-3 65.72 6.0 0.6 intron Wnt6 + chr2L_4_7350001 chr2L_7350001 0.25 RAL-176 28 chr2L 7464650 7464714 17.6 10 7413 16 64 '5-11 67.85 7.1 2.0 intergenic not near genes chr2L_16_7460001 chr2L_7460001 0.31 RAL-176 29 chr2L 7993549 7993684 Stalker2 3 440 6 135 '5-1 64.67 3.8 1.2 intron pes - chr2L_6_7990001 chr2L_7990001 0.83 RAL-176 30 chr2L 8091348 8091403 FB 13 9 16 55 '10-6 63.58 8.8 1.6 intron Bsg + chr2L_16_8090001 chr2L_8090001 0.62 RAL-176 31 chr2L 8993962 8994033 pogo 2099 3 17 71 '6-11 67.45 3.4 3.9 3` UTR alien - chr2L_17_8990001 chr2L_8990001 0.35 RAL-176 32 chr2L 9368668 9368801 Doc 4446 2 25 133 '1-24 64.21 7.6 2.9 intergenic CG34181 + chr2L_25_9365001 chr2L_9365001 0.04 RAL-176 33 chr2L 10650113 10650179 Quasimodo 7355 4 7 66 '2-5 68.76 3.7 1.5 3` UTR CG17097 + chr2L_7_10650001 chr2L_10650001 0.29 RAL-176 34 chr2L 10931727 10931779 jockey 4774 4688 12 52 '2-10 63.34 4.4 2.2 intron dpr2 - chr2L_12_10930001 chr2L_10930001 0.17 RAL-176 35 chr2L 11173919 11173988 pogo 9 2098 20 69 '6-14 68.52 5.9 2.9 intron Ca-beta - chr2L_20_11170001 chr2L_11170001 0.30 RAL-176 36 chr2L 11679830 11679922 accord 7032 7031 5 92 '1-4 81.38 9.1 0.5 intergenic not near genes chr2L_5_11675001 chr2L_11675001 0.20 RAL-176 37 chr2L 11867333 11867368 BS 4999 5034 22 35 '9-13 63.09 7.0 2.8 intron Pde1c - chr2L_22_11865001 chr2L_11865001 0.41 RAL-176 38 chr2L 11947684 11947886 roo 406 8677 28 202 '27-1 62.05 6.4 3.8 intergenic CG16964 + chr2L_28_11945001 chr2L_11945001 0.96 RAL-176 39 chr2L 12045202 12045425 HMS-Beagle 6796 198 44 223 '42-2 64.76 9.5 4.2 intergenic CG6785 -,CG6770 - chr2L_44_12045001 chr2L_12045001 0.95 RAL-176 40 chr2L 12240659 12240731 hobo 2936 3 20 72 '6-14 62.64 9.9 1.8 intron aret + chr2L_20_12240001 chr2L_12240001 0.30 RAL-176 41 chr2L 12266462 12266497 jockey 4590 4555 21 35 '9-12 63.00 11.4 1.7 intron aret + chr2L_21_12265001 chr2L_12265001 0.43 RAL-176 42 chr2L 12322363 12322422 Max-element 300 8250 17 59 '11-6 61.09 10.2 1.5 intergenic not near genes chr2L_17_12320001 chr2L_12320001 0.65 RAL-176 43 chr2L 12415360 12415432 roo 404 8668 17 72 '8-9 67.16 3.6 3.7 intron vir-1 - chr2L_17_12415001 chr2L_12415001 0.47 RAL-176 44 chr2L 13292072 13292174 412 495 216 14 102 '10-4 67.56 6.1 2.0 intron CG31729 + chr2L_14_13290001 chr2L_13290001 0.71 RAL-176 45 chr2L 13345377 13345500 mdg3 255 5249 34 123 '7-27 62.84 3.9 6.9 intergenic not near genes chr2L_34_13345001 chr2L_13345001 0.21 RAL-176 46 chr2L 13385351 13385437 mdg3 5253 248 14 86 '7-7 66.39 8.0 1.6 3` UTR,3` UTR loqs +,CR44599 - chr2L_14_13385001 chr2L_13385001 0.50 RAL-176 47 chr2L 13602798 13602815 BS 21 10 6 17 '4-2 66.57 11.6 0.5 intron kuz + chr2L_6_13600001 chr2L_13600001 0.67 RAL-176 48 chr2L 13620962 13621032 Tabor 13 487 13 70 '7-6 67.97 6.8 1.7 intron kuz + chr2L_13_13620001 chr2L_13620001 0.54 RAL-176 49 chr2L 13780465 13780543 pogo 2097 2 16 78 '4-12 70.61 4.3 3.0 intergenic p38b +,CG9008 - chr2L_16_13780001 chr2L_13780001 0.25 RAL-176 50 chr2L 14381287 14381351 Ivk 5378 8 18 64 '7-11 63.18 9.3 1.7 intergenic ppk - chr2L_18_14380001 chr2L_14380001 0.39 RAL-176 51 chr2L 15123421 15123548 roo 8667 447 20 127 '17-3 61.06 6.0 2.9 intergenic not near genes chr2L_20_15120001 chr2L_15120001 0.85 RAL-176 52 chr2L 15156685 15156958 297 6952 6580 9 273 '1-8 64.95 7.1 1.1 intergenic not near genes chr2L_9_15155001 chr2L_15155001 0.11 RAL-176 53 chr2L 15205296 15205356 pogo 3 2080 11 60 '6-5 66.79 1.8 3.9 intergenic not near genes chr2L_11_15205001 chr2L_15205001 0.55 RAL-176 54 chr2L 15778130 15778177 jockey 4672 4698 7 47 '3-4 63.34 4.1 1.4 intergenic not near genes chr2L_7_15775001 chr2L_15775001 0.43 RAL-176 55 chr2L 15778202 15778291 hobo 2693 23 19 89 '3-16 64.95 2.3 5.8 intergenic not near genes chr2L_19_15775001 chr2L_15775001 0.16 RAL-176 56 chr2L 15780720 15781026 hopper 1400 1412 18 306 '1-17 62.79 3.9 3.7 intergenic not near genes chr2L_18_15780001 chr2L_15780001 0.06 RAL-176 57 chr2L 15832811 15833074 hobo 2918 6 21 263 '1-20 64.77 5.9 3.0 intergenic not near genes chr2L_21_15830001 chr2L_15830001 0.05 RAL-176 58 chr2L 15833534 15833627 jockey 59 10 18 93 '1-17 61.94 9.3 1.7 intergenic not near genes chr2L_18_15830001 chr2L_15830001 0.06 RAL-176 59 chr2L 15866721 15866778 Idefix 14 7381 5 57 '1-4 67.38 1.9 1.7 intergenic not near genes chr2L_5_15865001 chr2L_15865001 0.20 RAL-176 60 chr2L 15894552 15894612 BS 5085 5078 10 60 '4-6 59.60 8.1 1.1 intergenic not near genes chr2L_10_15890001 chr2L_15890001 0.40 RAL-176 61 chr2L 16125394 16125478 blood 378 7009 37 84 '25-12 64.64 11.6 2.9 intergenic not near genes chr2L_37_16125001 chr2L_16125001 0.68 RAL-176 62 chr2L 16234381 16234479 opus 498 7201 28 98 '15-13 61.77 5.6 4.2 intron CG42817 + chr2L_28_16230001 chr2L_16230001 0.54 RAL-176 63 chr2L 16371597 16371663 hobo 14 2709 12 66 '3-9 63.79 12.1 0.9 intergenic not near genes chr2L_12_16370001 chr2L_16370001 0.25 RAL-176 64 chr2L 16555720 16555835 Rt1b 457 4888 6 115 '5-1 60.38 2.9 1.5 intron CG42389 + chr2L_6_16555001 chr2L_16555001 0.83 RAL-176 65 chr2L 16565114 16565285 copia 257 109 13 171 '12-1 66.09 8.1 1.4 intron CG42389 + chr2L_13_16565001 chr2L_16565001 0.92 RAL-176 66 chr2L 17066060 17066128 flea 255 4769 11 68 '6-5 63.73 2.8 2.9 intergenic not near genes chr2L_11_17065001 chr2L_17065001 0.55 RAL-176 67 chr2L 17947402 17947497 blood 7254 379 44 95 '22-22 67.01 7.6 5.1 intergenic not near genes chr2L_44_17945001 chr2L_17945001 0.50 RAL-176 68 chr2L 18354211 18354230 F-element 10 31 7 19 '3-4 54.53 0.7 4.1 intron Fas3 + chr2L_7_18350001 chr2L_18350001 0.43 RAL-176 69 chr2L 18454638 18454800 1360 1 3278 45 162 '44-1 66.69 10.6 3.9 intergenic Ntf-2r +,bsf - chr2L_45_18450001 chr2L_18450001 0.98 RAL-176 70 chr2L 18560251 18560327 mdg1 7039 419 12 76 '7-5 61.33 6.4 1.6 intron Pde11 - chr2L_12_18560001 chr2L_18560001 0.58 RAL-176 71 chr2L 18570483 18570547 FB 3 9 22 64 '18-4 68.05 3.1 5.4 intron Pde11 - chr2L_22_18570001 chr2L_18570001 0.82 RAL-176 72 chr2L 18996422 18996483 412 480 7 11 61 '3-8 64.27 3.0 2.8 intergenic CG10650 - chr2L_11_18995001 chr2L_18995001 0.27 RAL-176 73 chr2L 19089402 19089434 Doc 67 99 11 32 '8-3 60.87 7.9 1.2 intron Lim3 - chr2L_11_19085001 chr2L_19085001 0.73 RAL-176 74 chr2L 19263123 19263424 412 7082 496 32 301 '1-31 63.33 8.5 3.4 intergenic CR44191 + chr2L_32_19260001 chr2L_19260001 0.03 RAL-176 75 chr2L 19678101 19678250 flea 257 4832 9 149 '4-5 67.94 7.1 1.1 intron Lar + chr2L_9_19675001 chr2L_19675001 0.44 RAL-176 76 chr2L 19681413 19681439 hopper 1412 1386 8 26 '6-2 60.55 11.0 0.7 intron Lar + chr2L_8_19680001 chr2L_19680001 0.75 RAL-176 77 chr2L 19808498 19808583 copia 4867 260 10 85 '3-7 69.09 3.1 2.4 intron sick + chr2L_10_19805001 chr2L_19805001 0.30 RAL-176 78 chr2L 20145538 20145645 flea 52 5008 21 107 '7-14 65.53 5.0 3.5 intergenic not near genes chr2L_21_20145001 chr2L_20145001 0.33 RAL-176 79 chr2L 20271123 20271158 Doc 38 3 20 35 '11-9 66.43 8.5 2.1 intergenic not near genes chr2L_20_20270001 chr2L_20270001 0.55 RAL-176 80 chr2L 20623277 20623295 Doc 13 32 6 18 '3-3 67.90 8.0 0.7 intron CR44909 - chr2L_6_20620001 chr2L_20620001 0.50 RAL-176 81 chr2L 20890728 20890755 jockey 4673 4700 13 27 '5-8 64.19 9.6 1.2 intron,intron CG43739 -,sky - chr2L_13_20890001 chr2L_20890001 0.38 RAL-176 82 chr2L 20897651 20897724 FB 2 2 14 73 '8-6 66.42 7.5 1.6 intron,intron CG43739 -,sky - chr2L_14_20895001 chr2L_20895001 0.57 RAL-176 83 chr2L 21286782 21286869 Max-element 8252 3 8 87 '3-5 66.13 2.6 2.2 intron Mio - chr2L_8_21285001 chr2L_21285001 0.38 RAL-176 84 chr2L 21570229 21570252 Dm88 27 4364 6 23 '3-3 67.11 1.6 2.3 intergenic not near genes chr2L_6_21570001 chr2L_21570001 0.50 RAL-176 85 chr2L 21618829 21619067 roo 8745 409 24 238 '1-23 66.79 7.6 2.8 intron CG2201 - chr2L_24_21615001 chr2L_21615001 0.04 RAL-176 86 chr2L 22092932 22092992 INE-1 530 547 5 60 '1-4 60.53 3.1 1.2 intergenic not near genes chr2L_5_22090001 chr2L_22090001 0.20 RAL-176 87 chr2L 22133124 22133360 Burdock 21 6153 7 236 '6-1 64.90 1.1 3.3 intergenic not near genes chr2L_7_22130001 chr2L_22130001 0.86 RAL-176 88 chr2L 22181117 22181139 R1A1-element 5200 5221 7 22 '2-5 57.85 2.3 2.1 intron CG3635 + chr2L_7_22180001 chr2L_22180001 0.29 RAL-176 89 chr2L 22211279 22211545 INE-1 255 130 4 266 '1-3 70.76 1.8 1.4 intron Ir40a - chr2L_4_22210001 chr2L_22210001 0.25 RAL-176 90 chr2L 22490465 22490483 HMS-Beagle 58 58 5 18 '1-4 59.47 0.0 5.0 intergenic not near genes chr2L_5_22490001 chr2L_22490001 0.20 RAL-176 91 chr2L 22490471 22490524 invader1 3943 3953 9 53 '5-4 71.56 0.0 9.0 intergenic not near genes chr2L_9_22490001 chr2L_22490001 0.56 RAL-176 92 chr2L 22497658 22497821 invader1 306 145 13 163 '3-10 69.92 1.8 4.6 intergenic not near genes chr2L_13_22495001 chr2L_22495001 0.23 RAL-176 93 chr2L 22547480 22547560 Max-element 299 8234 19 80 '17-2 58.49 13.0 1.4 intron CG17490 + chr2L_19_22545001 chr2L_22545001 0.89 RAL-176 94 chr2L 22592387 22592465 roo 409 8667 33 78 '20-13 66.66 10.0 3.0 intergenic not near genes chr2L_33_22590001 chr2L_22590001 0.61 RAL-176 95 chr2L 23083046 23083130 HMS-Beagle 6794 246 42 84 '22-20 66.46 8.1 4.6 intergenic not near genes chr2L_42_23080001 chr2L_23080001 0.52 RAL-176 96 chr2L 23295811 23295862 micropia 5435 6 7 51 '4-3 61.38 5.7 1.0 intergenic not near genes chr2L_7_23295001 chr2L_23295001 0.57 RAL-176 97 chr2L 23299979 23299997 invader4 3079 329 12 18 '8-4 56.61 16.1 0.7 intergenic not near genes chr2L_12_23295001 chr2L_23295001 0.67 RAL-176 98 chr2L 23313670 23313732 S-element 1710 1696 6 62 '4-2 71.23 1.4 2.5 intergenic CG40042 - chr2L_6_23310001 chr2L_23310001 0.67 RAL-176 99 chr2R 1441535 1441557 Rt1b 4687 4712 6 22 '4-2 60.76 15.3 0.4 intron l(2)41Ab + chr2R_6_1440001 chr2R_1440001 0.67 RAL-176 100 chr2R 1511082 1511239 1360 27 2 5 157 '3-2 73.79 17.6 0.3 intergenic not near genes chr2R_5_1510001 chr2R_1510001 0.60 RAL-176 101 chr2R 1512857 1512942 1360 3369 3231 4 85 '2-2 67.62 37.6 0.1 3` UTR Maf1 - chr2R_4_1510001 chr2R_1510001 0.50 RAL-176 102 chr2R 1758833 1758858 F-element 40 222 5 25 '3-2 61.64 3.8 1.0 intron CG41520 + chr2R_5_1755001 chr2R_1755001 0.60 RAL-176 103 chr2R 1982105 1982174 1360 3318 3377 14 69 '1-13 71.62 2.1 4.5 intron CG17684 - chr2R_14_1980001 chr2R_1980001 0.07 RAL-176 104 chr2R 3146448 3146471 rover 220 7043 4 23 '3-1 67.26 3.6 0.9 intron CG42596 + chr2R_4_3145001 chr2R_3145001 0.75 RAL-176 105 chr2R 4164564 4164625 Burdock 6159 257 6 61 '1-5 63.14 6.8 0.8 intergenic not near genes chr2R_6_4160001 chr2R_4160001 0.17 RAL-176 106 chr2R 4500859 4500942 springer 1 7525 14 83 '5-9 62.51 10.3 1.2 intergenic not near genes chr2R_14_4500001 chr2R_4500001 0.36 RAL-176 107 chr2R 4686036 4686097 roo 393 8668 9 61 '6-3 66.39 0.9 4.7 intergenic not near genes chr2R_9_4685001 chr2R_4685001 0.67 RAL-176 108 chr2R 4802891 4802913 mariner2 13 366 4 22 '3-1 64.84 16.7 0.2 intergenic not near genes chr2R_4_4800001 chr2R_4800001 0.75 RAL-176 109 chr2R 4887318 4887399 flea 256 4758 16 81 '5-11 64.82 2.0 5.3 intergenic not near genes chr2R_16_4885001 chr2R_4885001 0.31 RAL-176 110 chr2R 4977092 4977112 1360 21 3388 9 20 '4-5 63.66 3.8 1.9 intron Ir41a + chr2R_9_4975001 chr2R_4975001 0.44 RAL-176 111 chr2R 5178481 5178672 mdg3 5402 5256 15 191 '1-14 60.31 4.1 2.9 exon Nipped-A - chr2R_15_5175001 chr2R_5175001 0.07 RAL-176 112 chr2R 5531164 5531195 1360 53 45 14 31 '9-5 59.34 6.7 1.8 intron CG30438 + chr2R_14_5530001 chr2R_5530001 0.64 RAL-176 113 chr2R 5667071 5667272 INE-1 555 540 4 201 '1-3 74.95 2.7 1.1 intergenic not near genes chr2R_4_5665001 chr2R_5665001 0.25 RAL-176 114 chr2R 5674702 5674720 S-element 33 1703 5 18 '2-3 60.22 1.5 2.0 intergenic not near genes chr2R_5_5670001 chr2R_5670001 0.40 RAL-176 115 chr2R 5802463 5802517 roo 22 9067 20 54 '6-14 69.02 3.7 4.3 intergenic not near genes chr2R_20_5800001 chr2R_5800001 0.30 RAL-176 116 chr2R 5869050 5869284 Transpac 299 5048 18 234 '15-3 67.89 3.0 4.5 intergenic not near genes chr2R_18_5865001 chr2R_5865001 0.83 RAL-176 117 chr2R 6234327 6234425 INE-1 84 86 6 98 '1-5 62.66 7.7 0.7 intron bin3 + chr2R_6_6230001 chr2R_6230001 0.17 RAL-176 118 chr2R 6271503 6271562 rover 84 37 7 59 '3-4 65.34 19.8 0.3 intergenic not near genes chr2R_7_6270001 chr2R_6270001 0.43 RAL-176 119 chr2R 6492921 6492995 copia 4883 155 13 74 '5-8 61.58 2.5 3.7 intergenic not near genes chr2R_13_6490001 chr2R_6490001 0.38 RAL-176 120 chr2R 6557609 6557706 opus 7499 111 33 97 '23-10 64.16 7.4 3.9 intron jing + chr2R_33_6555001 chr2R_6555001 0.70 RAL-176 121 chr2R 6759127 6759197 copia 247 2 18 70 '8-10 65.45 7.1 2.2 intergenic CG9436 - chr2R_18_6755001 chr2R_6755001 0.44 RAL-176 122 chr2R 6892428 6892520 HMS-Beagle2 74 6880 50 92 '26-24 65.18 9.4 4.8 intron CG30158 + chr2R_50_6890001 chr2R_6890001 0.52 RAL-176 123 chr2R 6921857 6922216 Max-element 158 243 52 359 '49-3 60.99 12.7 3.8 3` UTR CG30158 + chr2R_52_6920001 chr2R_6920001 0.94 RAL-176 124 chr2R 6930909 6930969 1360 16 30 39 60 '17-22 68.32 16.6 2.2 intron mim - chr2R_39_6930001 chr2R_6930001 0.44 RAL-176 125 chr2R 6944537 6944552 Transpac 310 5214 6 15 '2-4 60.36 8.3 0.6 intron mim - chr2R_6_6940001 chr2R_6940001 0.33 RAL-176 126 chr2R 7131245 7131328 Transpac 311 4919 30 83 '15-15 66.12 9.9 2.8 intron Cyp9b2 - chr2R_30_7130001 chr2R_7130001 0.50 RAL-176 127 chr2R 7232681 7232838 jockey 35 96 19 157 '15-4 63.00 6.3 2.6 intergenic Or43a - chr2R_19_7230001 chr2R_7230001 0.79 RAL-176 128 chr2R 7887247 7887273 jockey 23 5 20 26 '10-10 56.23 15.3 1.2 intergenic not near genes chr2R_20_7885001 chr2R_7885001 0.50 RAL-176 129 chr2R 7981131 7981310 1360 1 3230 42 179 '41-1 68.88 10.1 3.8 intron ACC - chr2R_42_7980001 chr2R_7980001 0.98 RAL-176 130 chr2R 8366340 8366419 mdg3 248 5256 9 79 '2-7 65.73 15.4 0.5 intron,exon pdm3 +,boly - chr2R_9_8365001 chr2R_8365001 0.22 RAL-176 131 chr2R 8383729 8383930 mdg1 315 7038 17 201 '2-15 66.30 7.8 1.9 intron pdm3 + chr2R_17_8380001 chr2R_8380001 0.12 RAL-176 132 chr2R 8546808 8546884 mdg3 5254 243 12 76 '5-7 62.46 2.3 3.6 intergenic not near genes chr2R_12_8545001 chr2R_8545001 0.42 RAL-176 133 chr2R 8769612 8769771 G2 2978 2873 16 159 '1-15 57.83 7.6 1.9 intergenic not near genes chr2R_16_8765001 chr2R_8765001 0.06 RAL-176 134 chr2R 9138876 9139219 Tirant 8473 2 22 343 '3-19 63.13 12.5 1.6 intron,intron CG44286 +,CG8788 + chr2R_22_9135001 chr2R_9135001 0.14 RAL-176 135 chr2R 9151246 9151335 HMS-Beagle 6957 28 31 89 '1-30 61.14 22.8 1.3 exon CG30345 + chr2R_31_9150001 chr2R_9150001 0.03 RAL-176 136 chr2R 9157776 9157801 HMS-Beagle 216 7037 14 25 '8-6 67.12 4.1 2.7 intergenic CG8008 - chr2R_14_9155001 chr2R_9155001 0.57 RAL-176 137 chr2R 9408167 9408235 FB 2 15 31 68 '18-13 63.64 10.2 2.8 intron wun - chr2R_31_9405001 chr2R_9405001 0.58 RAL-176 138 chr2R 9503408 9503730 Tirant 1 321 26 322 '7-19 64.71 11.2 2.1 intergenic Wnt2 +,brp + chr2R_26_9500001 chr2R_9500001 0.27 RAL-176 139 chr2R 9968364 9968526 1360 4 3376 15 162 '14-1 59.39 4.9 2.5 3` UTR CG12133 + chr2R_15_9965001 chr2R_9965001 0.93 RAL-176 140 chr2R 10134508 10134659 roo 474 8666 21 151 '5-16 66.14 2.7 5.7 intron gem + chr2R_21_10130001 chr2R_10130001 0.24 RAL-176 141 chr2R 10673227 10673353 P-element 2884 2696 30 126 '24-6 50.95 7.2 3.7 intergenic stan + chr2R_30_10670001 chr2R_10670001 0.80 RAL-176 142 chr2R 10788921 10789218 flea 4786 248 6 297 '1-5 60.98 7.0 0.8 intron CG33144 - chr2R_6_10785001 chr2R_10785001 0.17 RAL-176 143 chr2R 11030377 11030580 F-element 4658 24 9 203 '1-8 63.85 8.1 1.0 intron luna - chr2R_9_11030001 chr2R_11030001 0.11 RAL-176 144 chr2R 11051059 11051139 accord 7176 7030 4 80 '3-1 64.28 11.1 0.3 intron luna - chr2R_4_11050001 chr2R_11050001 0.75 RAL-176 145 chr2R 11104411 11104571 hobo 2926 135 22 160 '21-1 62.64 4.6 3.9 intron luna - chr2R_22_11100001 chr2R_11100001 0.95 RAL-176 146 chr2R 11246155 11246464 HMS-Beagle 248 2 21 309 '1-20 63.71 17.5 1.1 intergenic CG34225 + chr2R_21_11245001 chr2R_11245001 0.05 RAL-176 147 chr2R 11338914 11338995 3S18 5765 341 18 81 '14-4 64.20 5.8 2.6 intergenic kappaTry -,zetaTry - chr2R_18_11335001 chr2R_11335001 0.78 RAL-176 148 chr2R 11394041 11394189 pogo 120 2100 13 148 '4-9 62.12 5.4 2.0 intron sprt - chr2R_13_11390001 chr2R_11390001 0.31 RAL-176 149 chr2R 11403297 11403330 I-element 5328 6 5 33 '4-1 65.39 4.8 0.9 intergenic not near genes chr2R_5_11400001 chr2R_11400001 0.80 RAL-176 150 chr2R 11575033 11575390 INE-1 149 148 8 357 '7-1 61.74 1.9 2.8 intergenic not near genes chr2R_8_11575001 chr2R_11575001 0.88 RAL-176 151 chr2R 12185307 12185452 accord 7207 7020 23 145 '15-8 66.10 11.7 1.8 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_23_12185001 chr2R_12185001 0.65 RAL-176 152 chr2R 12650182 12650319 Transpac 5090 311 25 137 '7-18 66.62 3.8 5.2 intergenic not near genes chr2R_25_12650001 chr2R_12650001 0.28 RAL-176 153 chr2R 12743458 12743672 mdg1 7413 7038 4 214 '1-3 68.90 6.5 0.5 intron CG42663 + chr2R_4_12740001 chr2R_12740001 0.25 RAL-176 154 chr2R 13129408 13129479 diver 221 3 24 71 '11-13 61.91 5.9 3.5 intergenic CG13326 -,CG3955 - chr2R_24_13125001 chr2R_13125001 0.46 RAL-176 155 chr2R 13430176 13430232 Tc3 308 309 4 56 '3-1 56.55 7.2 0.5 intron CG42321 - chr2R_4_13430001 chr2R_13430001 0.75 RAL-176 156 chr2R 13942526 13942772 I-element 73 5347 24 246 '2-22 61.82 5.1 3.9 intergenic DJ-1alpha -,shot - chr2R_24_13940001 chr2R_13940001 0.08 RAL-176 157 chr2R 14444037 14444123 accord 7028 184 7 86 '4-3 75.24 14.6 0.4 intron Oaz + chr2R_7_14440001 chr2R_14440001 0.57 RAL-176 158 chr2R 14848980 14849163 flea 4710 4769 26 183 '25-1 68.17 23.2 1.1 exon SMC2 - chr2R_26_14845001 chr2R_14845001 0.96 RAL-176 159 chr2R 15155184 15155419 flea 256 4836 23 235 '22-1 70.86 7.2 2.8 intergenic igl + chr2R_23_15155001 chr2R_15155001 0.96 RAL-176 160 chr2R 15302837 15302919 roo 8664 410 34 82 '18-16 68.36 9.4 3.3 intron Trpm - chr2R_34_15300001 chr2R_15300001 0.53 RAL-176 161 chr2R 16507030 16507234 297 6968 6583 13 204 '12-1 64.13 2.6 3.6 intron Sema-2a + chr2R_13_16505001 chr2R_16505001 0.92 RAL-176 162 chr2R 16646680 16646922 Doc2-element 218 222 5 242 '4-1 46.42 14.9 0.3 exon gprs + chr2R_5_16645001 chr2R_16645001 0.80 RAL-176 163 chr2R 16734131 16734409 copia 256 4889 6 278 '5-1 65.49 4.6 1.1 intergenic not near genes chr2R_6_16730001 chr2R_16730001 0.83 RAL-176 164 chr2R 16892084 16892143 jockey 36 234 28 59 '23-5 60.19 4.9 4.7 intron CG8910 - chr2R_28_16890001 chr2R_16890001 0.82 RAL-176 165 chr2R 16935270 16935301 jockey 10 20 16 31 '11-5 61.46 9.2 1.6 intron Pkc53E + chr2R_16_16935001 chr2R_16935001 0.69 RAL-176 166 chr2R 17048708 17048777 mdg1 7 44 5 69 '4-1 63.20 1.3 2.2 3` UTR CG9642 + chr2R_5_17045001 chr2R_17045001 0.80 RAL-176 167 chr2R 17268759 17268811 FB 1 10 12 52 '6-6 54.20 3.4 2.7 intron mbl + chr2R_12_17265001 chr2R_17265001 0.50 RAL-176 168 chr2R 17850400 17850488 hobo 2 2637 39 88 '16-23 67.27 11.2 3.2 intron olf186-F + chr2R_39_17850001 chr2R_17850001 0.41 RAL-176 169 chr2R 18006068 18006141 roo 399 8662 7 73 '3-4 65.48 2.3 2.1 intron dpr13 - chr2R_7_18005001 chr2R_18005001 0.43 RAL-176 170 chr2R 18032836 18032907 412 3 488 11 71 '6-5 67.43 5.7 1.6 intergenic not near genes chr2R_11_18030001 chr2R_18030001 0.55 RAL-176 171 chr2R 18332880 18333270 FB 12 9 24 390 '1-23 63.94 3.2 5.7 intron sbb - chr2R_24_18330001 chr2R_18330001 0.04 RAL-176 172 chr2R 18687830 18687858 jockey 4787 4759 11 28 '10-1 58.00 5.0 1.8 intron CG42855 + chr2R_11_18685001 chr2R_18685001 0.91 RAL-176 173 chr2R 18695194 18695306 hobo 2930 220 24 112 '20-4 62.75 8.7 2.5 intron Sik3 + chr2R_24_18695001 chr2R_18695001 0.83 RAL-176 174 chr2R 18761676 18761745 hobo 2933 3 17 69 '4-13 58.07 7.2 2.1 intergenic Mctp + chr2R_17_18760001 chr2R_18760001 0.24 RAL-176 175 chr2R 18780644 18780715 mdg1 418 7045 10 71 '9-1 63.06 1.9 3.4 intergenic not near genes chr2R_10_18780001 chr2R_18780001 0.90 RAL-176 176 chr2R 19104946 19105099 3S18 326 5896 23 153 '21-2 64.21 2.7 6.2 intron 5-HT1A + chr2R_23_19100001 chr2R_19100001 0.91 RAL-176 177 chr2R 19106431 19106917 flea 4831 257 24 486 '23-1 69.28 4.5 4.4 intron 5-HT1A + chr2R_24_19105001 chr2R_19105001 0.96 RAL-176 178 chr2R 19173966 19174231 Doc2-element 252 244 4 265 '1-3 81.90 10.1 0.4 exon CG10737 + chr2R_4_19170001 chr2R_19170001 0.25 RAL-176 179 chr2R 19632471 19632747 1360 3 3345 37 276 '36-1 66.13 8.7 3.8 intergenic not near genes chr2R_37_19630001 chr2R_19630001 0.97 RAL-176 180 chr2R 19791823 19791847 I-element 28 6 11 24 '7-4 66.23 3.8 2.3 intergenic not near genes chr2R_11_19790001 chr2R_19790001 0.64 RAL-176 181 chr2R 20347158 20347491 mdg1 7455 5 24 333 '2-22 63.59 5.5 3.7 exon CG16741 + chr2R_24_20345001 chr2R_20345001 0.08 RAL-176 182 chr2R 20571401 20571424 roo 9041 402 8 23 '5-3 72.40 0.0 8.0 intron qsm - chr2R_8_20570001 chr2R_20570001 0.62 RAL-176 183 chr2R 20899200 20899271 accord 183 7044 6 71 '5-1 66.67 9.9 0.6 intron otp - chr2R_6_20895001 chr2R_20895001 0.83 RAL-176 184 chr2R 20906875 20906938 Juan 4025 4211 15 63 '12-3 56.11 1.2 6.8 intergenic not near genes chr2R_15_20905001 chr2R_20905001 0.80 RAL-176 185 chr2R 21194132 21194159 F-element 4624 4597 4 27 '3-1 64.00 3.3 0.9 intron Lapsyn + chr2R_4_21190001 chr2R_21190001 0.75 RAL-176 186 chr2R 21379586 21379639 P-element 24 1 23 53 '13-10 46.07 6.3 3.2 intergenic cv-2 - chr2R_23_21375001 chr2R_21375001 0.57 RAL-176 187 chr2R 21453369 21453492 1360 3191 6 25 123 '2-23 62.66 8.0 2.8 intron Sdc - chr2R_25_21450001 chr2R_21450001 0.08 RAL-176 188 chr2R 21527742 21527771 Doc 4 42 13 29 '5-8 63.22 4.9 2.2 intron Egfr + chr2R_13_21525001 chr2R_21525001 0.38 RAL-176 189 chr2R 21596687 21596713 Ivk 29 1 6 26 '2-4 58.39 9.2 0.6 intergenic not near genes chr2R_6_21595001 chr2R_21595001 0.33 RAL-176 190 chr2R 21607107 21607178 P-element 2884 2883 24 71 '11-13 51.46 11.5 1.9 5` UTR CG10433 - chr2R_24_21605001 chr2R_21605001 0.46 RAL-176 191 chr2R 21713970 21714021 P-element 2870 1 5 51 '2-3 52.90 10.5 0.4 intron HmgD + chr2R_5_21710001 chr2R_21710001 0.40 RAL-176 192 chr2R 22021484 22021609 roo 8621 171 15 125 '3-12 67.01 4.5 2.7 intron CG34370 - chr2R_15_22020001 chr2R_22020001 0.20 RAL-176 193 chr2R 22073298 22073363 P-element 2863 2701 22 65 '13-9 49.16 4.6 3.9 exon CG11474 - chr2R_22_22070001 chr2R_22070001 0.59 RAL-176 194 chr2R 22087978 22088070 Tc3 320 238 5 92 '3-2 73.19 4.2 1.0 intron CG13502 - chr2R_5_22085001 chr2R_22085001 0.60 RAL-176 195 chr2R 22087989 22088078 1360 2 3234 31 89 '23-8 64.59 5.1 5.1 intron CG13502 - chr2R_31_22085001 chr2R_22085001 0.74 RAL-176 196 chr2R 22287444 22287489 jockey 4689 4983 16 45 '11-5 62.66 4.0 3.2 intergenic not near genes chr2R_16_22285001 chr2R_22285001 0.69 RAL-176 197 chr2R 22589142 22589191 roo 407 8664 4 49 '3-1 74.73 12.9 0.3 intron dnr1 - chr2R_4_22585001 chr2R_22585001 0.75 RAL-176 198 chr2R 22736059 22736137 3S18 340 5764 18 78 '1-17 62.54 12.2 1.4 intron jbug - chr2R_18_22735001 chr2R_22735001 0.06 RAL-176 199 chr2R 22792872 22793123 I-element 47 5344 9 251 '1-8 62.06 2.1 2.9 intron CG42260 - chr2R_9_22790001 chr2R_22790001 0.11 RAL-176 200 chr2R 23088910 23088994 blood 1 381 41 84 '15-26 64.73 9.8 3.8 intergenic not near genes chr2R_41_23085001 chr2R_23085001 0.37 RAL-176 201 chr2R 23110309 23110385 hobo 2710 3 30 76 '9-21 67.59 8.8 3.1 3` UTR CR44781 - chr2R_30_23110001 chr2R_23110001 0.30 RAL-176 202 chr2R 23130702 23130772 412 495 13 17 70 '8-9 64.53 4.0 3.4 intergenic not near genes chr2R_17_23130001 chr2R_23130001 0.47 RAL-176 203 chr2R 23138595 23138831 I-element 2 5309 21 236 '20-1 61.31 2.5 6.0 5` UTR CG30192 + chr2R_21_23135001 chr2R_23135001 0.95 RAL-176 204 chr2R 23421295 23421375 roo 8664 410 41 80 '13-28 70.22 9.6 3.9 intergenic CG9815 - chr2R_41_23420001 chr2R_23420001 0.32 RAL-176 205 chr2R 23441378 23441396 pogo 2089 29 4 18 '1-3 70.09 4.4 0.7 intergenic Or59a - chr2R_4_23440001 chr2R_23440001 0.25 RAL-176 206 chr2R 23476709 23476991 roo 409 37 40 282 '37-3 66.31 8.4 4.3 intron,5` UTR CG43795 +,CR43792 + chr2R_40_23475001 chr2R_23475001 0.93 RAL-176 207 chr2R 23487727 23488036 HMS-Beagle 248 6813 36 309 '34-2 65.64 18.6 1.8 intron CG43795 + chr2R_36_23485001 chr2R_23485001 0.94 RAL-176 208 chr2R 24470056 24470320 I-element 81 5217 23 264 '13-10 67.63 6.8 2.9 intron CG13579 + chr2R_23_24470001 chr2R_24470001 0.57 RAL-176 209 chr2R 24851053 24851140 Stalker4 413 6954 23 87 '12-11 64.77 11.3 1.9 intergenic not near genes chr2R_23_24850001 chr2R_24850001 0.52 RAL-176 210 chr2R 24851114 24851156 Stalker 6872 184 9 42 '7-2 68.05 11.1 0.7 intergenic not near genes chr2R_9_24850001 chr2R_24850001 0.78 RAL-176 211 chr2R 25203587 25203796 1360 3350 3357 20 209 '2-18 64.24 4.5 3.6 intron CG9380 - chr2R_20_25200001 chr2R_25200001 0.10 RAL-176 212 chr3L 107302 107365 297 6958 1 6 63 '3-3 65.82 2.8 1.6 intergenic not near genes chr3L_6_105001 chr3L_105001 0.50 RAL-176 213 chr3L 543410 543615 P-element 4 88 13 205 '12-1 45.95 10.3 1.2 intergenic Cypl - chr3L_13_540001 chr3L_540001 0.92 RAL-176 214 chr3L 548701 548836 FB 4 14 37 135 '34-3 63.23 11.4 3.0 intron hipk + chr3L_37_545001 chr3L_545001 0.92 RAL-176 215 chr3L 708322 708371 P-element 2870 10 29 49 '12-17 40.44 7.7 3.3 intergenic CG13895 -,CkIIalpha-i3 - chr3L_29_705001 chr3L_705001 0.41 RAL-176 216 chr3L 1059903 1060165 Tirant 353 8122 29 262 '1-28 66.77 4.0 5.8 intron bab1 - chr3L_29_1055001 chr3L_1055001 0.03 RAL-176 217 chr3L 1261309 1261341 hobo 2707 2911 12 32 '6-6 63.82 14.5 0.8 intron CG9134 + chr3L_12_1260001 chr3L_1260001 0.50 RAL-176 218 chr3L 1430021 1430050 accord 7032 7031 4 29 '2-2 71.53 11.5 0.3 intron Ptp61F - chr3L_4_1430001 chr3L_1430001 0.50 RAL-176 219 chr3L 1488562 1488753 mdg3 5253 127 22 191 '19-3 64.68 4.7 3.9 intron stet - chr3L_22_1485001 chr3L_1485001 0.86 RAL-176 220 chr3L 1552871 1552949 mdg3 245 5254 15 78 '1-14 62.01 16.3 0.9 3` UTR Cct1 + chr3L_15_1550001 chr3L_1550001 0.07 RAL-176 221 chr3L 1590296 1590797 Transpac 4943 5163 17 501 '5-12 61.00 6.2 2.4 intron CG13917 + chr3L_17_1590001 chr3L_1590001 0.29 RAL-176 222 chr3L 1711475 1711648 Tabor 479 6960 23 173 '22-1 63.72 9.2 2.3 intron CG7991 + chr3L_23_1710001 chr3L_1710001 0.96 RAL-176 223 chr3L 1740858 1741216 opus 499 7181 9 358 '5-4 69.06 2.6 2.5 intron Gk + chr3L_9_1740001 chr3L_1740001 0.56 RAL-176 224 chr3L 1916542 1916844 mdg3 5255 191 32 302 '31-1 62.95 7.2 3.9 intergenic not near genes chr3L_32_1915001 chr3L_1915001 0.97 RAL-176 225 chr3L 2185009 2185037 jockey 17 8 20 28 '13-7 59.50 9.4 1.9 intergenic not near genes chr3L_20_2185001 chr3L_2185001 0.65 RAL-176 226 chr3L 2205322 2205384 jockey 4987 8 23 62 '6-17 61.74 7.8 2.6 intergenic not near genes chr3L_23_2205001 chr3L_2205001 0.26 RAL-176 227 chr3L 2461986 2462054 jockey 4890 4757 8 68 '1-7 47.33 2.0 2.7 intron CG45186 + chr3L_8_2460001 chr3L_2460001 0.12 RAL-176 228 chr3L 2528355 2528431 roo 410 6 12 76 '6-6 71.53 3.5 2.7 intron Spn - chr3L_12_2525001 chr3L_2525001 0.50 RAL-176 229 chr3L 2680067 2680087 Ivk 5352 5372 17 20 '10-7 61.53 18.1 0.9 intron Fife - chr3L_17_2680001 chr3L_2680001 0.59 RAL-176 230 chr3L 2918135 2918205 hobo 1 2611 19 70 '12-7 59.84 7.9 2.1 intron Shab + chr3L_19_2915001 chr3L_2915001 0.63 RAL-176 231 chr3L 3051735 3052007 HMS-Beagle 6796 247 40 272 '19-21 62.72 4.1 7.8 3` UTR CG32485 + chr3L_40_3050001 chr3L_3050001 0.47 RAL-176 232 chr3L 3076701 3076827 jockey 34 148 20 126 '19-1 61.89 12.5 1.5 intron CG11486 + chr3L_20_3075001 chr3L_3075001 0.95 RAL-176 233 chr3L 3368612 3368657 pogo 2077 15 12 45 '1-11 68.16 2.0 4.0 intergenic kst + chr3L_12_3365001 chr3L_3365001 0.08 RAL-176 234 chr3L 3500541 3500615 mdg1 421 6 18 74 '7-11 64.04 4.3 3.4 intron CG42324 + chr3L_18_3500001 chr3L_3500001 0.39 RAL-176 235 chr3L 4631704 4631762 jockey 7 4984 13 58 '9-4 68.99 8.5 1.4 intron axo - chr3L_13_4630001 chr3L_4630001 0.69 RAL-176 236 chr3L 4743862 4743881 accord 7031 7027 4 19 '2-2 70.03 5.7 0.6 intron RhoGEF64C + chr3L_4_4740001 chr3L_4740001 0.50 RAL-176 237 chr3L 4871266 4871401 jockey 4976 4889 4 135 '2-2 69.95 12.8 0.3 intron CG17150 + chr3L_4_4870001 chr3L_4870001 0.50 RAL-176 238 chr3L 5169367 5169416 412 34 495 9 49 '1-8 63.22 8.3 1.0 intron shep - chr3L_9_5165001 chr3L_5165001 0.11 RAL-176 239 chr3L 5236673 5236750 blood 7015 377 19 77 '5-14 65.41 3.0 4.8 intron shep - chr3L_19_5235001 chr3L_5235001 0.26 RAL-176 240 chr3L 5259359 5259374 hobo 16 2 13 15 '6-7 59.11 6.7 1.7 intron shep - chr3L_13_5255001 chr3L_5255001 0.46 RAL-176 241 chr3L 5264311 5264349 297 6605 6955 7 38 '4-3 73.51 1.0 3.5 intron shep - chr3L_7_5260001 chr3L_5260001 0.57 RAL-176 242 chr3L 5275675 5275749 1360 2 3 37 74 '15-22 67.41 10.8 3.1 intron shep - chr3L_37_5275001 chr3L_5275001 0.41 RAL-176 243 chr3L 5385020 5385275 F-element 4663 103 8 255 '7-1 65.00 3.5 1.8 intergenic not near genes chr3L_8_5385001 chr3L_5385001 0.88 RAL-176 244 chr3L 5731011 5731094 Max-element 302 8235 57 83 '29-28 61.21 15.0 3.6 intron sif + chr3L_57_5730001 chr3L_5730001 0.51 RAL-176 245 chr3L 5915109 5915313 Transpac 342 4919 34 204 '3-31 64.33 5.7 5.1 intron CG13288 + chr3L_34_5915001 chr3L_5915001 0.09 RAL-176 246 chr3L 5960223 5960543 Stalker2 7640 7247 27 320 '2-25 63.09 7.9 3.0 intergenic not near genes chr3L_27_5960001 chr3L_5960001 0.07 RAL-176 247 chr3L 6646257 6646342 3S18 5761 341 28 85 '15-13 64.76 10.6 2.4 intergenic not near genes chr3L_28_6645001 chr3L_6645001 0.54 RAL-176 248 chr3L 6671608 6671911 HMS-Beagle2 7199 6896 55 303 '52-3 67.69 15.2 3.4 intergenic not near genes chr3L_55_6670001 chr3L_6670001 0.95 RAL-176 249 chr3L 6899638 6899875 hopper 1399 28 19 237 '1-18 64.18 8.5 2.0 intergenic not near genes chr3L_19_6895001 chr3L_6895001 0.05 RAL-176 250 chr3L 7053712 7053781 pogo 8 2094 10 69 '4-6 68.80 2.9 2.6 intergenic Mp + chr3L_10_7050001 chr3L_7050001 0.40 RAL-176 251 chr3L 7224062 7224090 jockey 4771 4759 10 28 '7-3 57.39 7.9 1.1 intergenic CR45410 + chr3L_10_7220001 chr3L_7220001 0.70 RAL-176 252 chr3L 7490231 7490585 hopper 1414 45 24 354 '23-1 63.09 5.8 3.5 intergenic not near genes chr3L_24_7490001 chr3L_7490001 0.96 RAL-176 253 chr3L 7967818 7967896 opus 7496 7115 21 78 '5-16 68.66 6.4 2.8 intergenic not near genes chr3L_21_7965001 chr3L_7965001 0.24 RAL-176 254 chr3L 8395162 8395225 BS 4743 4811 28 63 '3-25 55.93 12.2 2.1 intergenic not near genes chr3L_28_8395001 chr3L_8395001 0.11 RAL-176 255 chr3L 8697132 8697254 mdg3 247 5432 33 122 '25-8 63.83 1.2 15.0 intergenic not near genes chr3L_33_8695001 chr3L_8695001 0.76 RAL-176 256 chr3L 9048693 9048772 Transpac 310 4922 18 79 '13-5 66.59 10.1 1.6 3` UTR CG5144 + chr3L_18_9045001 chr3L_9045001 0.72 RAL-176 257 chr3L 9130368 9130529 P-element 10 2884 32 161 '2-30 48.94 8.6 3.3 intergenic bol - chr3L_32_9130001 chr3L_9130001 0.06 RAL-176 258 chr3L 9544551 9544591 mdg1 7069 7450 11 40 '1-10 58.37 3.1 2.7 intergenic not near genes chr3L_11_9540001 chr3L_9540001 0.09 RAL-176 259 chr3L 9690667 9690740 S-element 1707 1714 12 73 '3-9 65.49 2.8 3.2 intron CG6767 - chr3L_12_9690001 chr3L_9690001 0.25 RAL-176 260 chr3L 9753368 9753540 roo 314 8663 10 172 '1-9 74.02 4.2 1.9 exon CG42268 - chr3L_10_9750001 chr3L_9750001 0.10 RAL-176 261 chr3L 10036036 10036064 jockey 4672 4686 11 28 '5-6 61.84 14.1 0.7 intron dpr6 + chr3L_11_10035001 chr3L_10035001 0.45 RAL-176 262 chr3L 10075846 10075925 412 495 3 21 79 '11-10 68.91 7.5 2.5 intron dpr6 + chr3L_21_10075001 chr3L_10075001 0.52 RAL-176 263 chr3L 10112832 10112876 X-element 7 4689 18 44 '12-6 63.61 8.7 1.9 intron dpr6 + chr3L_18_10110001 chr3L_10110001 0.67 RAL-176 264 chr3L 10165798 10165822 Doc 39 14 7 24 '5-2 71.93 3.8 1.5 intron dpr10 - chr3L_7_10165001 chr3L_10165001 0.71 RAL-176 265 chr3L 10470956 10471288 mdg3 5480 5088 26 332 '2-24 66.89 4.1 5.1 intergenic not near genes chr3L_26_10470001 chr3L_10470001 0.08 RAL-176 266 chr3L 10542139 10542215 hobo 2 2938 28 76 '16-12 68.39 6.2 3.9 intron A2bp1 + chr3L_28_10540001 chr3L_10540001 0.57 RAL-176 267 chr3L 10564588 10564669 roo 8664 410 18 81 '12-6 67.02 5.3 2.9 intron A2bp1 + chr3L_18_10560001 chr3L_10560001 0.67 RAL-176 268 chr3L 10572338 10572371 jockey 4791 4758 15 33 '6-9 62.86 12.6 1.1 intron A2bp1 + chr3L_15_10570001 chr3L_10570001 0.40 RAL-176 269 chr3L 10675760 10675960 mdg3 63 227 15 200 '1-14 66.84 3.6 3.3 intron simj + chr3L_15_10675001 chr3L_10675001 0.07 RAL-176 270 chr3L 11596576 11596606 jockey 10 5 29 30 '19-10 59.78 10.8 2.5 intergenic not near genes chr3L_29_11595001 chr3L_11595001 0.66 RAL-176 271 chr3L 11705354 11705491 mdg3 5253 250 11 137 '9-2 63.15 6.1 1.5 intron CG11658 - chr3L_11_11705001 chr3L_11705001 0.82 RAL-176 272 chr3L 12072084 12072148 1360 3383 9 45 64 '33-12 66.25 10.2 4.0 intron Sema-5c - chr3L_45_12070001 chr3L_12070001 0.73 RAL-176 273 chr3L 12188279 12188357 mdg1 7038 7042 9 78 '7-2 65.14 0.9 4.7 intergenic CG6910 + chr3L_9_12185001 chr3L_12185001 0.78 RAL-176 274 chr3L 12828038 12828224 pogo 127 2100 28 186 '1-27 64.29 8.8 2.9 intron CG10960 - chr3L_28_12825001 chr3L_12825001 0.04 RAL-176 275 chr3L 12832037 12832307 mdg3 5265 5498 20 270 '1-19 69.45 11.4 1.6 intron CG10960 - chr3L_20_12830001 chr3L_12830001 0.05 RAL-176 276 chr3L 13320885 13321168 Transpac 310 25 31 283 '30-1 68.86 7.9 3.5 intergenic not near genes chr3L_31_13320001 chr3L_13320001 0.97 RAL-176 277 chr3L 13342240 13342375 Transpac 295 4826 16 135 '14-2 62.73 6.0 2.3 intergenic not near genes chr3L_16_13340001 chr3L_13340001 0.88 RAL-176 278 chr3L 13467883 13467973 1360 3043 3041 4 90 '1-3 68.00 4.9 0.7 intron CG10089 - chr3L_4_13465001 chr3L_13465001 0.25 RAL-176 279 chr3L 13662584 13662662 Tabor 5 488 31 78 '14-17 63.45 9.4 3.0 intron bru-3 - chr3L_31_13660001 chr3L_13660001 0.45 RAL-176 280 chr3L 14635830 14635916 roo 2 416 28 86 '14-14 69.02 8.0 3.1 intron dlp + chr3L_28_14635001 chr3L_14635001 0.50 RAL-176 281 chr3L 14687746 14687887 Juan 4158 4189 7 141 '2-5 63.87 9.5 0.7 intron ome + chr3L_7_14685001 chr3L_14685001 0.29 RAL-176 282 chr3L 15007612 15007687 roo 7 410 20 75 '12-8 66.25 7.5 2.4 intron Reck - chr3L_20_15005001 chr3L_15005001 0.60 RAL-176 283 chr3L 15035126 15035198 pogo 2100 10 18 72 '9-9 70.92 6.9 2.3 intron Sytbeta - chr3L_18_15035001 chr3L_15035001 0.50 RAL-176 284 chr3L 15113184 15113211 pogo 2098 2071 5 27 '3-2 69.94 1.2 2.3 intergenic CTPsyn +,CG13458 + chr3L_5_15110001 chr3L_15110001 0.60 RAL-176 285 chr3L 15265266 15265353 gypsy5 413 6937 23 87 '14-9 64.41 5.9 3.3 intergenic not near genes chr3L_23_15265001 chr3L_15265001 0.61 RAL-176 286 chr3L 15608120 15608175 pogo 26 2098 7 55 '3-4 73.20 3.3 1.6 3` UTR RhoGAP71E + chr3L_7_15605001 chr3L_15605001 0.43 RAL-176 287 chr3L 16691355 16691543 G2 2763 2751 10 188 '1-9 67.71 4.7 1.8 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_10_16690001 chr3L_16690001 0.10 RAL-176 288 chr3L 16919756 16919831 R1A1-element 4878 5333 37 75 '22-15 66.10 6.3 5.1 intron Lmpt + chr3L_37_16915001 chr3L_16915001 0.59 RAL-176 289 chr3L 17058619 17058691 1360 3 3385 22 72 '8-14 66.64 3.2 5.2 intergenic CG7724 +,Rbp6 - chr3L_22_17055001 chr3L_17055001 0.36 RAL-176 290 chr3L 17165102 17165339 hobo 1 2827 8 237 '7-1 68.06 8.4 0.9 intron Rbp6 - chr3L_8_17165001 chr3L_17165001 0.88 RAL-176 291 chr3L 17223521 17223590 pogo 2099 13 18 69 '13-5 71.07 8.0 2.0 intron Rbp6 - chr3L_18_17220001 chr3L_17220001 0.72 RAL-176 292 chr3L 17692349 17692555 F-element 4293 4331 29 206 '26-3 62.11 9.5 2.8 intron Ccn + chr3L_29_17690001 chr3L_17690001 0.90 RAL-176 293 chr3L 17695714 17695785 HMS-Beagle 6796 7035 36 71 '27-9 64.57 10.7 3.1 intron Ccn + chr3L_36_17695001 chr3L_17695001 0.75 RAL-176 294 chr3L 18068571 18068647 flea 4761 255 13 76 '7-6 68.86 7.1 1.6 intergenic CG44006 - chr3L_13_18065001 chr3L_18065001 0.54 RAL-176 295 chr3L 18687596 18687622 F-element 4323 4298 17 26 '11-6 56.92 2.4 5.0 intergenic not near genes chr3L_17_18685001 chr3L_18685001 0.65 RAL-176 296 chr3L 18844792 18844909 1360 17 3244 27 117 '21-6 67.35 1.8 9.6 intron Indy - chr3L_27_18840001 chr3L_18840001 0.78 RAL-176 297 chr3L 19049828 19050006 mdg3 68 5250 20 178 '2-18 62.42 7.6 2.3 intergenic not near genes chr3L_20_19045001 chr3L_19045001 0.10 RAL-176 298 chr3L 19087750 19087961 P-element 9 36 22 211 '21-1 50.20 5.2 3.5 intergenic not near genes chr3L_22_19085001 chr3L_19085001 0.95 RAL-176 299 chr3L 19682054 19682133 roo 8664 407 19 79 '12-7 67.61 7.4 2.3 intergenic not near genes chr3L_19_19680001 chr3L_19680001 0.63 RAL-176 300 chr3L 19776904 19777138 blood 7010 7376 18 234 '17-1 65.86 6.0 2.6 intron,intron CG42637 -,Gyc76C - chr3L_18_19775001 chr3L_19775001 0.94 RAL-176 301 chr3L 19951209 19951254 Ivk 15 5367 5 45 '1-4 64.84 4.0 1.0 intron Ac76E + chr3L_5_19950001 chr3L_19950001 0.20 RAL-176 302 chr3L 19959117 19959198 roo 8661 406 23 81 '10-13 70.17 4.3 4.3 intron Ac76E + chr3L_23_19955001 chr3L_19955001 0.43 RAL-176 303 chr3L 20072733 20072762 X-element 4599 4570 7 29 '3-4 57.83 6.9 0.9 intron sNPF-R - chr3L_7_20070001 chr3L_20070001 0.43 RAL-176 304 chr3L 20224145 20224225 Chimpo 186 1 17 80 '5-12 64.28 5.4 2.7 intron CG17147 + chr3L_17_20220001 chr3L_20220001 0.29 RAL-176 305 chr3L 20287395 20287656 hopper 32 20 20 261 '19-1 64.92 6.2 2.8 intron gogo - chr3L_20_20285001 chr3L_20285001 0.95 RAL-176 306 chr3L 20410812 20410931 jockey 4766 4705 13 119 '1-12 64.76 3.7 2.8 intergenic CG13248 - chr3L_13_20410001 chr3L_20410001 0.08 RAL-176 307 chr3L 21058202 21058275 297 394 6590 7 73 '2-5 66.01 4.1 1.4 intron siz + chr3L_7_21055001 chr3L_21055001 0.29 RAL-176 308 chr3L 21065244 21065479 1360 3196 191 42 235 '16-26 68.33 6.3 5.8 intron siz + chr3L_42_21065001 chr3L_21065001 0.38 RAL-176 309 chr3L 21145686 21145708 INE-1 543 567 11 22 '4-7 55.53 5.0 1.8 intron Ac78C - chr3L_11_21145001 chr3L_21145001 0.36 RAL-176 310 chr3L 21379233 21379260 copia 27 4869 4 27 '2-2 68.00 3.0 1.0 intergenic not near genes chr3L_4_21375001 chr3L_21375001 0.50 RAL-176 311 chr3L 21764572 21764718 jockey 4760 4850 21 146 '19-2 67.67 7.2 2.6 intron Syn1 - chr3L_21_21760001 chr3L_21760001 0.90 RAL-176 312 chr3L 21783349 21783416 blood 7374 7010 24 67 '7-17 66.08 5.5 3.7 intergenic not near genes chr3L_24_21780001 chr3L_21780001 0.29 RAL-176 313 chr3L 21798626 21798650 mdg3 5257 29 8 24 '3-5 67.47 10.5 0.7 intergenic not near genes chr3L_8_21795001 chr3L_21795001 0.38 RAL-176 314 chr3L 21918674 21918942 mdg3 5230 119 33 268 '30-3 63.65 6.1 4.6 intron mub + chr3L_33_21915001 chr3L_21915001 0.91 RAL-176 315 chr3L 22016749 22016822 INE-1 148 151 4 73 '3-1 68.48 1.4 1.7 intergenic not near genes chr3L_4_22015001 chr3L_22015001 0.75 RAL-176 316 chr3L 22256259 22256387 gypsy 6985 7298 19 128 '16-3 71.06 2.8 5.0 intergenic not near genes chr3L_19_22255001 chr3L_22255001 0.84 RAL-176 317 chr3L 22399559 22399808 FB 99 2 20 249 '1-19 68.14 6.5 2.7 intron Ten-m - chr3L_20_22395001 chr3L_22395001 0.05 RAL-176 318 chr3L 22599692 22599883 F-element 20 32 10 191 '9-1 58.20 9.0 1.0 intron CG14459 - chr3L_10_22595001 chr3L_22595001 0.90 RAL-176 319 chr3L 22635501 22635762 hopper 35 1413 19 261 '1-18 65.61 8.4 2.0 intron CG14459 - chr3L_19_22635001 chr3L_22635001 0.05 RAL-176 320 chr3L 22737609 22737663 I-element 5340 4 16 54 '5-11 61.70 2.1 5.2 intron CG11241 - chr3L_16_22735001 chr3L_22735001 0.31 RAL-176 321 chr3L 22744669 22744697 FB 4 17 11 28 '1-10 71.68 4.1 2.2 intron CG7369 + chr3L_11_22740001 chr3L_22740001 0.09 RAL-176 322 chr3L 22768213 22768259 roo 9050 8677 7 46 '2-5 64.49 1.7 2.6 intron SPoCk + chr3L_7_22765001 chr3L_22765001 0.29 RAL-176 323 chr3L 22824809 22824923 P-element 5 182 18 114 '17-1 42.61 9.1 1.8 intron jim - chr3L_18_22820001 chr3L_22820001 0.94 RAL-176 324 chr3L 22827269 22827343 copia 4869 249 13 74 '3-10 67.07 2.0 4.3 intron jim - chr3L_13_22825001 chr3L_22825001 0.23 RAL-176 325 chr3L 22885990 22886069 S-element 1714 1714 17 79 '12-5 60.99 5.1 2.8 intron slif + chr3L_17_22885001 chr3L_22885001 0.71 RAL-176 326 chr3L 22982902 22983024 1360 3326 22 34 122 '18-16 65.97 6.1 4.8 intergenic not near genes chr3L_34_22980001 chr3L_22980001 0.53 RAL-176 327 chr3L 23067738 23067759 roo 9042 399 9 21 '4-5 68.00 7.5 1.1 intergenic not near genes chr3L_9_23065001 chr3L_23065001 0.44 RAL-176 328 chr3L 23146385 23146466 hopper 1350 1329 7 81 '4-3 68.53 15.9 0.4 intergenic not near genes chr3L_7_23145001 chr3L_23145001 0.57 RAL-176 329 chr3L 23146479 23146523 1360 21 42 19 44 '13-6 64.54 12.3 1.4 intergenic not near genes chr3L_19_23145001 chr3L_23145001 0.68 RAL-176 330 chr3L 23208122 23208147 Doc 7 32 9 25 '5-4 61.98 5.3 1.4 intron nAChRalpha4 + chr3L_9_23205001 chr3L_23205001 0.56 RAL-176 331 chr3L 23580788 23580857 Stalker2 388 7246 7 69 '2-5 59.17 5.4 1.1 intron AGO3 + chr3L_7_23580001 chr3L_23580001 0.29 RAL-176 332 chr3L 23702866 23702892 INE-1 148 174 4 26 '1-3 78.14 11.0 0.3 intergenic not near genes chr3L_4_23700001 chr3L_23700001 0.25 RAL-176 333 chr3L 23815774 23815912 F-element 25 71 8 138 '7-1 66.68 4.4 1.5 intergenic not near genes chr3L_8_23815001 chr3L_23815001 0.88 RAL-176 334 chr3L 24153189 24153250 Tabor 478 13 10 61 '6-4 65.60 2.3 3.0 intron Snap25 + chr3L_10_24150001 chr3L_24150001 0.60 RAL-176 335 chr3L 24272107 24272123 gypsy11 49 4056 4 16 '3-1 71.80 8.8 0.4 intron Snap25 + chr3L_4_24270001 chr3L_24270001 0.75 RAL-176 336 chr3L 25078397 25078414 Transpac 4942 6 4 17 '2-2 65.34 7.9 0.4 intergenic not near genes chr3L_4_25075001 chr3L_25075001 0.50 RAL-176 337 chr3L 25162591 25162650 1360 14 3387 5 59 '3-2 59.72 15.5 0.3 intergenic not near genes chr3L_5_25160001 chr3L_25160001 0.60 RAL-176 338 chr3L 25272542 25272560 1360 6 24 7 18 '4-3 64.38 7.7 0.8 intron CG40467 - chr3L_7_25270001 chr3L_25270001 0.57 RAL-176 339 chr3L 25323194 25323263 Max-element 8234 288 13 69 '1-12 59.71 3.3 3.0 intergenic not near genes chr3L_13_25320001 chr3L_25320001 0.08 RAL-176 340 chr3L 26834367 26834387 invader4 2734 2754 9 20 '5-4 56.82 8.7 0.9 intergenic not near genes chr3L_9_26830001 chr3L_26830001 0.56 RAL-176 341 chr3L 27145276 27145361 1360 3379 3356 7 85 '4-3 65.59 0.0 7.0 intron vtd + chr3L_7_27145001 chr3L_27145001 0.57 RAL-176 342 chr3L 27415235 27415296 transib2 2814 7 6 61 '4-2 58.50 6.4 0.8 intron Dbp80 + chr3L_6_27415001 chr3L_27415001 0.67 RAL-176 343 chr3L 27714749 27714821 1360 3378 3 5 72 '3-2 67.35 10.6 0.4 intergenic not near genes chr3L_5_27710001 chr3L_27710001 0.60 RAL-176 344 chr3R 723157 723183 gypsy6 69 55 6 26 '4-2 57.69 1.5 2.4 intergenic not near genes chr3R_6_720001 chr3R_720001 0.67 RAL-176 345 chr3R 1397919 1397937 1360 3375 3361 13 18 '8-5 74.58 4.8 2.2 intron CG40155 + chr3R_13_1395001 chr3R_1395001 0.62 RAL-176 346 chr3R 2270661 2270676 Stalker3T 211 214 5 15 '2-3 72.94 79.7 0.1 intergenic not near genes chr3R_5_2270001 chr3R_2270001 0.40 RAL-176 347 chr3R 2393051 2393072 diver2 4792 286 7 21 '3-4 59.95 2.0 2.3 intergenic not near genes chr3R_7_2390001 chr3R_2390001 0.43 RAL-176 348 chr3R 2424352 2424482 Ivk 5097 5119 4 130 '3-1 70.33 2.2 1.2 intergenic not near genes chr3R_4_2420001 chr3R_2420001 0.75 RAL-176 349 chr3R 2628879 2629068 1360 52 49 4 189 '3-1 71.77 5.3 0.6 intron CG41056 - chr3R_4_2625001 chr3R_2625001 0.75 RAL-176 350 chr3R 2651232 2651260 flea 4782 4756 10 28 '6-4 67.12 2.9 2.6 intron CG41056 - chr3R_10_2650001 chr3R_2650001 0.60 RAL-176 351 chr3R 3033566 3033584 Doc2-element 244 233 6 18 '1-5 69.49 38.4 0.2 intergenic not near genes chr3R_6_3030001 chr3R_3030001 0.17 RAL-176 352 chr3R 3627053 3627219 1360 3355 3361 7 166 '3-4 72.79 16.4 0.4 3` UTR Alg-2 + chr3R_7_3625001 chr3R_3625001 0.43 RAL-176 353 chr3R 3753007 3753107 ZAM 8223 447 16 100 '2-14 66.58 8.2 1.7 intergenic not near genes chr3R_16_3750001 chr3R_3750001 0.12 RAL-176 354 chr3R 4167854 4168054 1360 9 1 43 200 '1-42 66.44 3.4 9.8 intergenic not near genes chr3R_43_4165001 chr3R_4165001 0.02 RAL-176 355 chr3R 4524219 4524293 1360 1 3 55 74 '27-28 64.88 10.7 4.7 intron CG34357 - chr3R_55_4520001 chr3R_4520001 0.49 RAL-176 356 chr3R 4553743 4553832 roo 9040 8929 14 89 '13-1 67.27 3.9 2.9 intron CG34357 - chr3R_14_4550001 chr3R_4550001 0.93 RAL-176 357 chr3R 4941600 4942007 HMS-Beagle 7033 6708 50 407 '1-49 64.53 14.5 3.2 exon Cdep + chr3R_50_4940001 chr3R_4940001 0.02 RAL-176 358 chr3R 4986030 4986188 roo 1 409 19 158 '16-3 65.47 4.0 3.8 3` UTR CR43424 - chr3R_19_4985001 chr3R_4985001 0.84 RAL-176 359 chr3R 5159228 5159420 1360 3388 4 30 192 '29-1 68.64 5.6 4.5 intron dpr16 + chr3R_30_5155001 chr3R_5155001 0.97 RAL-176 360 chr3R 5324076 5324427 1360 20 3279 45 351 '29-16 66.58 8.1 4.9 intron mtd - chr3R_45_5320001 chr3R_5320001 0.64 RAL-176 361 chr3R 5855458 5855514 I-element 3 5341 8 56 '6-2 63.00 6.3 1.1 intron disp - chr3R_8_5855001 chr3R_5855001 0.75 RAL-176 362 chr3R 5919440 5919471 jockey 4548 4579 9 31 '5-4 65.63 6.4 1.2 intron CG34113 - chr3R_9_5915001 chr3R_5915001 0.56 RAL-176 363 chr3R 6024453 6024485 hopper 1382 1 26 32 '10-16 63.60 3.5 5.8 intergenic not near genes chr3R_26_6020001 chr3R_6020001 0.38 RAL-176 364 chr3R 6423023 6423293 S-element 1665 1714 24 270 '1-23 63.59 4.0 4.8 intron gpp + chr3R_24_6420001 chr3R_6420001 0.04 RAL-176 365 chr3R 6953814 6954163 mdg3 5266 210 22 349 '18-4 66.45 4.9 3.7 intron Antp - chr3R_22_6950001 chr3R_6950001 0.82 RAL-176 366 chr3R 6979680 6979751 3S18 6098 2 10 71 '2-8 62.60 7.8 1.1 intron Antp - chr3R_10_6975001 chr3R_6975001 0.20 RAL-176 367 chr3R 7113321 7113498 roo 9 410 29 177 '2-27 66.73 7.3 3.5 intron Alh - chr3R_29_7110001 chr3R_7110001 0.07 RAL-176 368 chr3R 7203892 7204226 Tirant 8478 20 25 334 '21-4 64.51 9.0 2.5 intergenic CG14609 + chr3R_25_7200001 chr3R_7200001 0.84 RAL-176 369 chr3R 7370071 7370142 297 390 7 9 71 '1-8 64.86 2.2 2.8 intergenic not near genes chr3R_9_7370001 chr3R_7370001 0.11 RAL-176 370 chr3R 7477454 7477472 BS 5018 5000 9 18 '6-3 55.93 3.7 1.9 intergenic not near genes chr3R_9_7475001 chr3R_7475001 0.67 RAL-176 371 chr3R 7609745 7609815 roo 8670 404 22 70 '16-6 68.40 10.3 1.9 intron CG34127 - chr3R_22_7605001 chr3R_7605001 0.73 RAL-176 372 chr3R 7874775 7874870 jockey 4613 4987 23 95 '3-20 62.52 8.6 2.4 intron CG17816 - chr3R_23_7870001 chr3R_7870001 0.13 RAL-176 373 chr3R 8334346 8334531 hopper 1292 1411 20 185 '1-19 61.43 6.2 2.8 intergenic not near genes chr3R_20_8330001 chr3R_8330001 0.05 RAL-176 374 chr3R 8348070 8348433 roo 410 14 27 363 '26-1 67.01 8.0 3.0 exon CG7352 + chr3R_27_8345001 chr3R_8345001 0.96 RAL-176 375 chr3R 8539394 8539575 hobo 135 2710 16 181 '1-15 71.88 9.0 1.6 intergenic not near genes chr3R_16_8535001 chr3R_8535001 0.06 RAL-176 376 chr3R 8582300 8582594 copia 237 4892 11 294 '1-10 64.80 6.5 1.5 intron 5-HT2B + chr3R_11_8580001 chr3R_8580001 0.09 RAL-176 377 chr3R 8621714 8621828 jockey 10 184 8 114 '7-1 62.31 10.3 0.7 intron 5-HT2B + chr3R_8_8620001 chr3R_8620001 0.88 RAL-176 378 chr3R 9121500 9121620 roo 5 407 16 120 '8-8 66.47 3.7 3.4 intron pum - chr3R_16_9120001 chr3R_9120001 0.50 RAL-176 379 chr3R 9287166 9287422 mdg3 5465 5492 20 256 '18-2 67.77 5.6 3.0 intergenic not near genes chr3R_20_9285001 chr3R_9285001 0.90 RAL-176 380 chr3R 9295884 9295945 hobo 9 2931 19 61 '15-4 64.39 5.7 2.8 intron CG8861 - chr3R_19_9295001 chr3R_9295001 0.79 RAL-176 381 chr3R 9300231 9300368 17.6 279 7418 17 137 '1-16 62.19 3.5 3.8 intron CG8861 - chr3R_17_9300001 chr3R_9300001 0.06 RAL-176 382 chr3R 9348001 9348149 FB 111 14 17 148 '1-16 67.21 8.2 1.8 intron CG45050 + chr3R_17_9345001 chr3R_9345001 0.06 RAL-176 383 chr3R 9426543 9426811 roo 8751 406 31 268 '1-30 70.51 7.1 3.8 intron ps + chr3R_31_9425001 chr3R_9425001 0.03 RAL-176 384 chr3R 9456033 9456231 jockey 75 31 17 198 '1-16 62.90 11.3 1.4 exon GstZ1 - chr3R_17_9455001 chr3R_9455001 0.06 RAL-176 385 chr3R 9606894 9606961 Tabor 486 6854 17 67 '12-5 63.90 6.8 2.2 intron CG8312 + chr3R_17_9605001 chr3R_9605001 0.71 RAL-176 386 chr3R 10026230 10026299 FB 1 5 27 69 '12-15 64.23 4.6 4.8 intron Mical - chr3R_27_10025001 chr3R_10025001 0.44 RAL-176 387 chr3R 10089568 10089863 BS 4818 33 19 295 '18-1 63.30 10.0 1.7 5` UTR CR45054 + chr3R_19_10085001 chr3R_10085001 0.95 RAL-176 388 chr3R 10126541 10126590 roo 8681 394 10 49 '3-7 64.76 1.7 3.7 intergenic not near genes chr3R_10_10125001 chr3R_10125001 0.30 RAL-176 389 chr3R 10139226 10139304 Tirant 8107 394 12 78 '8-4 65.84 7.6 1.4 intron tws - chr3R_12_10135001 chr3R_10135001 0.67 RAL-176 390 chr3R 10203687 10203722 jockey 36 3 7 35 '4-3 71.49 5.9 1.0 intron Syn + chr3R_7_10200001 chr3R_10200001 0.57 RAL-176 391 chr3R 10990750 10990833 roo 8665 412 19 83 '7-12 70.46 3.0 4.8 intron CG34114 + chr3R_19_10990001 chr3R_10990001 0.37 RAL-176 392 chr3R 11131421 11131494 blood 7018 7388 13 73 '2-11 57.75 2.5 3.7 intergenic not near genes chr3R_13_11130001 chr3R_11130001 0.15 RAL-176 393 chr3R 11142199 11142277 Max-element 8235 299 42 78 '19-23 61.96 9.2 4.1 intergenic not near genes chr3R_42_11140001 chr3R_11140001 0.45 RAL-176 394 chr3R 11181621 11181682 roo 9056 8617 29 61 '14-15 63.44 6.4 3.9 intergenic not near genes chr3R_29_11180001 chr3R_11180001 0.48 RAL-176 395 chr3R 11449206 11449241 Doc 264 299 13 35 '4-9 62.98 8.3 1.4 intron,intron sals -,CG17230 + chr3R_13_11445001 chr3R_11445001 0.31 RAL-176 396 chr3R 11566748 11566991 P-element 3 2831 13 243 '12-1 53.43 10.0 1.2 intron,intron fabp -,sea - chr3R_13_11565001 chr3R_11565001 0.92 RAL-176 397 chr3R 11656608 11656828 P-element 2876 85 19 220 '18-1 49.81 4.5 3.5 5` UTR CG42327 + chr3R_19_11655001 chr3R_11655001 0.95 RAL-176 398 chr3R 11700278 11700326 I-element 5346 8 8 48 '3-5 57.35 5.9 1.2 intergenic CG14718 + chr3R_8_11700001 chr3R_11700001 0.38 RAL-176 399 chr3R 12047409 12047485 Stalker2 401 7251 29 76 '12-17 61.48 6.4 3.9 intergenic not near genes chr3R_29_12045001 chr3R_12045001 0.41 RAL-176 400 chr3R 12521511 12521543 jockey 4 32 15 32 '3-12 61.55 6.8 1.9 intron Octbeta3R - chr3R_15_12520001 chr3R_12520001 0.20 RAL-176 401 chr3R 12821081 12821159 pogo 4 2099 22 78 '10-12 66.88 6.2 3.1 intergenic not near genes chr3R_22_12820001 chr3R_12820001 0.45 RAL-176 402 chr3R 12854755 12854829 hopper 1410 1413 24 74 '8-16 63.32 6.3 3.3 intergenic not near genes chr3R_24_12850001 chr3R_12850001 0.33 RAL-176 403 chr3R 12860960 12861062 G2 278 307 12 102 '1-11 63.93 8.6 1.2 intergenic not near genes chr3R_12_12860001 chr3R_12860001 0.08 RAL-176 404 chr3R 12885693 12885766 roo 6 408 12 73 '4-8 67.13 1.2 5.5 intergenic not near genes chr3R_12_12885001 chr3R_12885001 0.33 RAL-176 405 chr3R 12899162 12899396 jockey 16 68 16 234 '15-1 63.23 7.1 2.0 intergenic not near genes chr3R_16_12895001 chr3R_12895001 0.94 RAL-176 406 chr3R 12934119 12934183 roo 9058 2 24 64 '7-17 65.24 3.4 5.5 intron beat-Vb + chr3R_24_12930001 chr3R_12930001 0.29 RAL-176 407 chr3R 13456287 13456363 mdg3 5250 5491 22 76 '17-5 64.70 3.3 5.1 intron,intron CG14372 +,CR17025 - chr3R_22_13455001 chr3R_13455001 0.77 RAL-176 408 chr3R 13456349 13456419 pogo 3 2091 15 70 '7-8 65.83 2.3 4.5 intron,intron CG14372 +,CR17025 - chr3R_15_13455001 chr3R_13455001 0.47 RAL-176 409 chr3R 13508879 13508909 mdg1 7037 7067 4 30 '2-2 68.17 6.5 0.5 intergenic not near genes chr3R_4_13505001 chr3R_13505001 0.50 RAL-176 410 chr3R 13722135 13722228 1360 4 3188 26 93 '24-2 67.30 10.5 2.3 intron CG34383 + chr3R_26_13720001 chr3R_13720001 0.92 RAL-176 411 chr3R 13882104 13882173 roo 402 5 18 69 '10-8 64.68 7.2 2.2 intergenic not near genes chr3R_18_13880001 chr3R_13880001 0.56 RAL-176 412 chr3R 14097187 14097209 jockey 8 30 14 22 '8-6 55.98 15.7 0.8 intergenic CG9920 -,CCHa1 - chr3R_14_14095001 chr3R_14095001 0.57 RAL-176 413 chr3R 14191232 14191285 Stalker4 6953 7336 4 53 '3-1 64.97 3.2 1.0 intron Dop1R1 - chr3R_4_14190001 chr3R_14190001 0.75 RAL-176 414 chr3R 14191238 14191267 Stalker 6852 6879 5 29 '3-2 65.63 4.6 0.9 intron Dop1R1 - chr3R_5_14190001 chr3R_14190001 0.60 RAL-176 415 chr3R 14703765 14703849 297 8 6768 21 84 '10-11 73.94 8.3 2.3 intron kibra - chr3R_21_14700001 chr3R_14700001 0.48 RAL-176 416 chr3R 14743169 14743200 FB 32 1 7 31 '3-4 67.88 2.8 1.8 intron jvl + chr3R_7_14740001 chr3R_14740001 0.43 RAL-176 417 chr3R 14935274 14935348 roo 9070 5 28 74 '16-12 63.51 6.5 3.7 intergenic not near genes chr3R_28_14935001 chr3R_14935001 0.57 RAL-176 418 chr3R 14950400 14950629 mdg3 248 5353 22 229 '21-1 65.42 7.7 2.5 intergenic not near genes chr3R_22_14950001 chr3R_14950001 0.95 RAL-176 419 chr3R 15640984 15641067 Tabor 6874 486 19 83 '13-6 65.88 5.2 3.1 intergenic not near genes chr3R_19_15640001 chr3R_15640001 0.68 RAL-176 420 chr3R 15668886 15668942 Juan 4203 4024 6 56 '2-4 61.78 3.8 1.2 intron pxb + chr3R_6_15665001 chr3R_15665001 0.33 RAL-176 421 chr3R 15741688 15741762 297 479 6588 13 74 '10-3 65.47 6.2 1.8 intergenic not near genes chr3R_13_15740001 chr3R_15740001 0.77 RAL-176 422 chr3R 16349296 16349458 P-element 97 1 31 162 '1-30 51.28 7.0 3.9 intergenic CG14879 -,Manf + chr3R_31_16345001 chr3R_16345001 0.03 RAL-176 423 chr3R 16536846 16536899 BS 5084 2 15 53 '3-12 56.99 5.9 2.2 intron CG42342 + chr3R_15_16535001 chr3R_16535001 0.20 RAL-176 424 chr3R 17233659 17233747 springer 4 150 17 88 '7-10 52.17 1.8 6.1 intron beat-IIb - chr3R_17_17230001 chr3R_17230001 0.41 RAL-176 425 chr3R 17271966 17272270 hopper 9 1407 19 304 '18-1 63.74 6.0 2.7 intergenic not near genes chr3R_19_17270001 chr3R_17270001 0.95 RAL-176 426 chr3R 17436852 17436925 mdg3 5490 5253 21 73 '3-18 63.22 5.3 3.3 intron CG5873 + chr3R_21_17435001 chr3R_17435001 0.14 RAL-176 427 chr3R 17733261 17733334 INE-1 559 548 6 73 '2-4 72.63 2.3 1.8 intergenic Lgr1 +,CG14321 + chr3R_6_17730001 chr3R_17730001 0.33 RAL-176 428 chr3R 17750823 17751058 springer 147 171 11 235 '1-10 63.35 3.7 2.3 3` UTR TyrR - chr3R_11_17750001 chr3R_17750001 0.09 RAL-176 429 chr3R 17889353 17889433 pogo 2100 2 43 80 '25-18 67.18 12.5 3.2 intron Rim - chr3R_43_17885001 chr3R_17885001 0.58 RAL-176 430 chr3R 18068613 18068681 Quasimodo 7362 9 5 68 '2-3 66.56 5.8 0.7 intergenic not near genes chr3R_5_18065001 chr3R_18065001 0.40 RAL-176 431 chr3R 18088747 18088911 mdg3 5263 235 14 164 '1-13 59.69 1.8 5.0 intergenic not near genes chr3R_14_18085001 chr3R_18085001 0.07 RAL-176 432 chr3R 18272111 18272198 Tc3 317 236 7 87 '2-5 57.86 17.0 0.4 exon Vps39 - chr3R_7_18270001 chr3R_18270001 0.29 RAL-176 433 chr3R 18272119 18272290 1360 3387 3268 41 171 '40-1 65.53 16.9 2.3 exon Vps39 - chr3R_41_18270001 chr3R_18270001 0.98 RAL-176 434 chr3R 19058371 19058452 Burdock 6137 255 10 81 '7-3 54.12 5.3 1.6 intron cdi - chr3R_10_19055001 chr3R_19055001 0.70 RAL-176 435 chr3R 19469472 19469556 opus 112 499 30 84 '9-21 66.57 4.8 5.2 intron Dys + chr3R_30_19465001 chr3R_19465001 0.30 RAL-176 436 chr3R 19501449 19501474 jockey 35 10 14 25 '8-6 56.08 6.9 1.8 intron Dys + chr3R_14_19500001 chr3R_19500001 0.57 RAL-176 437 chr3R 19622908 19622932 pogo 2098 2074 4 24 '2-2 70.53 1.6 1.5 intron CG6231 - chr3R_4_19620001 chr3R_19620001 0.50 RAL-176 438 chr3R 19889936 19890254 Juan 4038 4203 16 318 '1-15 64.49 9.6 1.5 intergenic not near genes chr3R_16_19885001 chr3R_19885001 0.06 RAL-176 439 chr3R 20137259 20137336 Burdock 6136 6386 16 77 '15-1 63.31 5.4 2.5 intergenic not near genes chr3R_16_20135001 chr3R_20135001 0.94 RAL-176 440 chr3R 20154566 20154583 jockey 4768 4785 4 17 '2-2 61.67 5.2 0.6 intergenic not near genes chr3R_4_20150001 chr3R_20150001 0.50 RAL-176 441 chr3R 20366084 20366119 G2 89 54 27 35 '12-15 65.00 9.8 2.5 intergenic not near genes chr3R_27_20365001 chr3R_20365001 0.44 RAL-176 442 chr3R 21203639 21203673 jockey 4703 4673 19 34 '9-10 61.56 7.4 2.3 intron SNF4Agamma + chr3R_19_21200001 chr3R_21200001 0.47 RAL-176 443 chr3R 21245749 21245806 flea 4781 255 16 57 '7-9 68.47 1.3 7.0 intergenic CG5892 + chr3R_16_21245001 chr3R_21245001 0.44 RAL-176 444 chr3R 21548507 21548635 gypsy5 6937 7300 55 128 '40-15 65.76 8.9 5.6 intergenic slou - chr3R_55_21545001 chr3R_21545001 0.73 RAL-176 445 chr3R 21905153 21905264 mdg3 5284 5263 27 111 '26-1 66.88 6.5 3.6 intron CG6678 + chr3R_27_21905001 chr3R_21905001 0.96 RAL-176 446 chr3R 21993218 21993241 jockey 4983 4960 6 23 '3-3 63.45 4.2 1.2 intron Eip93F + chr3R_6_21990001 chr3R_21990001 0.50 RAL-176 447 chr3R 22275228 22275341 flea 4817 4756 28 113 '2-26 66.35 8.8 2.9 intron SKIP + chr3R_28_22275001 chr3R_22275001 0.07 RAL-176 448 chr3R 22652803 22652898 roo 8665 408 14 95 '2-12 63.24 3.7 3.0 intron wake + chr3R_14_22650001 chr3R_22650001 0.14 RAL-176 449 chr3R 22666863 22667131 P-element 2881 2825 32 268 '31-1 42.75 12.0 2.5 intron wake + chr3R_32_22665001 chr3R_22665001 0.97 RAL-176 450 chr3R 22700202 22700274 diver 224 5896 10 72 '6-4 65.49 1.9 3.4 3` UTR Cyp6d4 + chr3R_10_22700001 chr3R_22700001 0.60 RAL-176 451 chr3R 22733032 22733059 1360 59 3360 4 27 '2-2 72.14 26.7 0.1 exon Takl2 - chr3R_4_22730001 chr3R_22730001 0.50 RAL-176 452 chr3R 22836431 22836458 Doc 35 57 11 27 '6-5 58.18 15.6 0.7 intergenic not near genes chr3R_11_22835001 chr3R_22835001 0.55 RAL-176 453 chr3R 23016921 23017023 mdg3 248 5130 46 102 '18-28 66.20 10.3 4.1 intergenic not near genes chr3R_46_23015001 chr3R_23015001 0.39 RAL-176 454 chr3R 23030572 23030680 mdg3 5251 246 9 108 '1-8 59.42 10.3 0.8 intergenic not near genes chr3R_9_23030001 chr3R_23030001 0.11 RAL-176 455 chr3R 23187870 23188127 HeT-A 365 364 4 257 '3-1 81.10 15.2 0.2 intron cnc - chr3R_4_23185001 chr3R_23185001 0.75 RAL-176 456 chr3R 23721632 23721713 3S18 341 5765 17 81 '5-12 67.69 3.9 3.5 intergenic CG10232 - chr3R_17_23720001 chr3R_23720001 0.29 RAL-176 457 chr3R 23844693 23844856 Juan 4035 4074 5 163 '3-2 64.74 6.9 0.6 intron CG34355 + chr3R_5_23840001 chr3R_23840001 0.60 RAL-176 458 chr3R 23865951 23866032 rover 6950 7296 8 81 '5-3 70.80 4.9 1.4 intron Pli - chr3R_8_23865001 chr3R_23865001 0.62 RAL-176 459 chr3R 24505730 24506006 412 477 7303 16 276 '1-15 65.01 5.4 2.5 intergenic not near genes chr3R_16_24505001 chr3R_24505001 0.06 RAL-176 460 chr3R 24566486 24566767 3S18 5764 6091 10 281 '9-1 66.49 4.8 1.7 intron CG13624 - chr3R_10_24565001 chr3R_24565001 0.90 RAL-176 461 chr3R 24744558 24744574 hopper 1388 12 14 16 '7-7 64.06 8.5 1.5 intron tok + chr3R_14_24740001 chr3R_24740001 0.50 RAL-176 462 chr3R 25163130 25163195 mdg1 15 420 9 65 '2-7 61.78 2.7 2.4 intergenic not near genes chr3R_9_25160001 chr3R_25160001 0.22 RAL-176 463 chr3R 25206224 25206292 pogo 2096 8 5 68 '4-1 64.95 3.1 1.2 intron,intron Cad96Ca -,CG13654 + chr3R_5_25205001 chr3R_25205001 0.80 RAL-176 464 chr3R 25346485 25346562 roo 405 8664 34 77 '20-14 63.78 7.8 3.9 exon tobi - chr3R_34_25345001 chr3R_25345001 0.59 RAL-176 465 chr3R 25369455 25369598 hobo 2710 219 33 143 '28-5 65.78 8.4 3.5 intron Fur1 - chr3R_33_25365001 chr3R_25365001 0.85 RAL-176 466 chr3R 25764493 25764560 opus 7114 7493 16 67 '13-3 66.75 10.5 1.4 intergenic not near genes chr3R_16_25760001 chr3R_25760001 0.81 RAL-176 467 chr3R 25796041 25796065 BS 5024 5075 9 24 '2-7 57.99 4.8 1.6 intergenic not near genes chr3R_9_25795001 chr3R_25795001 0.22 RAL-176 468 chr3R 25884940 25885119 mdg3 5254 5489 24 179 '22-2 64.12 6.2 3.3 intron SppL + chr3R_24_25880001 chr3R_25880001 0.92 RAL-176 469 chr3R 26040914 26040982 hobo 3 2933 18 68 '12-6 62.24 7.4 2.1 3` UTR E(spl)m8-HLH + chr3R_18_26040001 chr3R_26040001 0.67 RAL-176 470 chr3R 26531692 26531739 I-element 8 5334 13 47 '7-6 65.37 8.6 1.4 intron plum - chr3R_13_26530001 chr3R_26530001 0.54 RAL-176 471 chr3R 26655607 26655670 jockey 4678 4694 6 63 '1-5 59.94 10.5 0.5 intron beat-VII - chr3R_6_26655001 chr3R_26655001 0.17 RAL-176 472 chr3R 26888132 26888200 FB 3 5 26 68 '12-14 65.57 7.3 3.1 intron T48 + chr3R_26_26885001 chr3R_26885001 0.46 RAL-176 473 chr3R 26967747 26967820 S-element 1709 1714 6 73 '2-4 63.82 3.1 1.5 intron CG5521 + chr3R_6_26965001 chr3R_26965001 0.33 RAL-176 474 chr3R 27288497 27288681 1360 3326 1 76 184 '1-75 69.05 15.4 4.6 5` UTR bigmax - chr3R_76_27285001 chr3R_27285001 0.01 RAL-176 475 chr3R 28149629 28149870 roo 8693 8730 14 241 '11-3 68.51 6.0 2.0 intron CG34354 + chr3R_14_28145001 chr3R_28145001 0.79 RAL-176 476 chr3R 28158027 28158083 jockey 4649 4694 10 56 '1-9 54.81 6.5 1.3 intron CG34354 + chr3R_10_28155001 chr3R_28155001 0.10 RAL-176 477 chr3R 28183974 28184011 412 499 7515 9 37 '3-6 64.16 7.0 1.1 intron CG34354 + chr3R_9_28180001 chr3R_28180001 0.33 RAL-176 478 chr3R 28297277 28297295 BS 13 5 13 18 '8-5 59.06 7.3 1.6 intergenic not near genes chr3R_13_28295001 chr3R_28295001 0.62 RAL-176 479 chr3R 28714391 28714420 hobo 33 4 30 29 '18-12 60.11 17.0 1.7 intron htt + chr3R_30_28710001 chr3R_28710001 0.60 RAL-176 480 chr3R 29207544 29207569 copia 1 4898 6 25 '3-3 65.80 10.6 0.5 intergenic not near genes chr3R_6_29205001 chr3R_29205001 0.50 RAL-176 481 chr3R 29400257 29400332 3S18 5769 6105 20 75 '13-7 66.67 1.1 9.5 intron Ptp99A + chr3R_20_29400001 chr3R_29400001 0.65 RAL-176 482 chr3R 29422939 29423139 412 346 121 19 200 '7-12 63.22 6.4 2.6 intron Ptp99A + chr3R_19_29420001 chr3R_29420001 0.37 RAL-176 483 chr3R 29635970 29635990 Rt1a 27 10 13 20 '6-7 58.96 14.7 0.8 intron Dop1R2 - chr3R_13_29635001 chr3R_29635001 0.46 RAL-176 484 chr3R 29702033 29702288 I-element 22 32 12 255 '1-11 60.67 5.3 1.9 intergenic not near genes chr3R_12_29700001 chr3R_29700001 0.08 RAL-176 485 chr3R 29970543 29970564 pogo 30 9 5 21 '3-2 65.07 4.1 1.0 intergenic not near genes chr3R_5_29970001 chr3R_29970001 0.60 RAL-176 486 chr3R 29983194 29983239 I-element 14 5344 7 45 '3-4 59.91 3.8 1.5 intergenic CG7896 + chr3R_7_29980001 chr3R_29980001 0.43 RAL-176 487 chr3R 30340485 30340799 roo 9038 8665 37 314 '2-35 69.07 12.7 2.7 intron hdc + chr3R_37_30340001 chr3R_30340001 0.05 RAL-176 488 chr3R 31410253 31410333 roo 409 8665 35 80 '22-13 65.48 5.5 5.4 intron Gprk2 + chr3R_35_31410001 chr3R_31410001 0.63 RAL-176 489 chr3R 31623913 31624043 3S18 177 6104 36 130 '9-27 63.17 8.5 3.8 intron kek6 + chr3R_36_31620001 chr3R_31620001 0.25 RAL-176 490 chr3R 31667918 31667945 hopper 1410 32 12 27 '5-7 65.35 13.2 0.8 intergenic not near genes chr3R_12_31665001 chr3R_31665001 0.42 RAL-176 491 chr3R 31880617 31880706 Tirant 8106 403 18 89 '12-6 64.55 10.0 1.6 intron heph - chr3R_18_31880001 chr3R_31880001 0.67 RAL-176 492 chr3R 31946025 31946102 1360 1 3388 47 77 '21-26 63.23 6.1 6.6 intron heph - chr3R_47_31945001 chr3R_31945001 0.45 RAL-176 493 chrX 968327 968584 mdg3 198 222 32 257 '1-31 65.12 5.2 5.2 intergenic CR45476 - chrX_32_965001 chrX_965001 0.03 RAL-176 494 chrX 979262 979332 roo 441 8661 11 70 '7-4 67.70 3.2 2.6 intergenic not near genes chrX_11_975001 chrX_975001 0.64 RAL-176 495 chrX 1062975 1063049 Tirant 392 8110 21 74 '11-10 64.58 9.1 2.1 intron CR44779 + chrX_21_1060001 chrX_1060001 0.52 RAL-176 496 chrX 1097334 1097584 roo 8771 409 17 250 '1-16 62.41 4.8 2.9 intron CG3655 - chrX_17_1095001 chrX_1095001 0.06 RAL-176 497 chrX 1131401 1131659 FB 7 40 10 258 '8-2 67.68 5.9 1.4 intron CG3655 - chrX_10_1130001 chrX_1130001 0.80 RAL-176 498 chrX 1494932 1495122 springer 147 369 17 190 '1-16 63.60 9.6 1.6 intron,intron inc +,Nmdar2 - chrX_17_1490001 chrX_1490001 0.06 RAL-176 499 chrX 2782903 2782963 roo 407 17 9 60 '6-3 67.19 3.4 2.0 intron kirre + chrX_9_2780001 chrX_2780001 0.67 RAL-176 500 chrX 2899310 2899383 roo 3 9067 19 73 '12-7 74.37 5.0 3.2 intron kirre + chrX_19_2895001 chrX_2895001 0.63 RAL-176 501 chrX 2917323 2917550 roo 409 21 24 227 '23-1 66.17 6.2 3.3 intron kirre + chrX_24_2915001 chrX_2915001 0.96 RAL-176 502 chrX 3090671 3090697 1360 3380 3354 17 26 '6-11 71.91 6.4 2.3 intron kirre + chrX_17_3090001 chrX_3090001 0.35 RAL-176 503 chrX 3270860 3270951 roo 9069 8926 18 91 '9-9 65.43 2.5 5.1 intron dnc + chrX_18_3270001 chrX_3270001 0.50 RAL-176 504 chrX 3274330 3274373 hobo 2928 7 10 43 '1-9 63.15 5.0 1.7 intron dnc + chrX_10_3270001 chrX_3270001 0.10 RAL-176 505 chrX 3279807 3279834 BS 4719 4745 10 27 '5-5 64.64 5.7 1.5 intron dnc + chrX_10_3275001 chrX_3275001 0.50 RAL-176 506 chrX 3434475 3434709 pogo 2034 25 5 234 '1-4 76.00 4.6 0.9 intron,intron CR44999 +,CG12535 - chrX_5_3430001 chrX_3430001 0.20 RAL-176 507 chrX 3703666 3703813 1360 3325 3175 7 147 '2-5 68.37 6.0 1.0 intergenic CR45102 + chrX_7_3700001 chrX_3700001 0.29 RAL-176 508 chrX 3744539 3744625 P-element 2879 214 18 86 '11-7 47.50 11.1 1.5 intron tlk + chrX_18_3740001 chrX_3740001 0.61 RAL-176 509 chrX 3914340 3914428 Burdock 6042 255 9 88 '4-5 67.14 6.8 1.2 intron CG42541 - chrX_9_3910001 chrX_3910001 0.44 RAL-176 510 chrX 4292467 4292504 hopper 27 1398 9 37 '2-7 70.75 8.0 1.0 intergenic not near genes chrX_9_4290001 chrX_4290001 0.22 RAL-176 511 chrX 4729641 4729821 412 4 7531 18 180 '17-1 65.04 3.0 4.5 intergenic Proc-R + chrX_18_4725001 chrX_4725001 0.94 RAL-176 512 chrX 4814691 4814764 roo 401 8664 26 73 '13-13 66.15 4.8 4.5 intergenic not near genes chrX_26_4810001 chrX_4810001 0.50 RAL-176 513 chrX 4874893 4874995 mdg3 247 5267 14 102 '11-3 61.23 3.4 3.2 intron CG42594 + chrX_14_4870001 chrX_4870001 0.79 RAL-176 514 chrX 4969340 4969538 Burdock 6236 6371 14 198 '1-13 68.70 9.2 1.4 intron CR44833 - chrX_14_4965001 chrX_4965001 0.07 RAL-176 515 chrX 5144520 5144588 3S18 6104 5774 11 68 '6-5 64.63 2.1 3.5 intron,intron CG15465 +,rg + chrX_11_5140001 chrX_5140001 0.55 RAL-176 516 chrX 5163449 5163519 roo 8669 406 14 70 '6-8 69.23 4.8 2.4 intron,intron CG15465 +,rg + chrX_14_5160001 chrX_5160001 0.43 RAL-176 517 chrX 5178871 5178925 jockey 4790 4736 11 54 '9-2 60.70 5.1 1.8 intron,intron CG15465 +,rg + chrX_11_5175001 chrX_5175001 0.82 RAL-176 518 chrX 5217042 5217252 hopper 1408 1352 6 210 '5-1 68.31 13.4 0.4 intron,intron CG15465 +,rg + chrX_6_5215001 chrX_5215001 0.83 RAL-176 519 chrX 5456563 5456637 roo 8665 403 24 74 '14-10 67.50 5.6 3.6 intron SPR + chrX_24_5455001 chrX_5455001 0.58 RAL-176 520 chrX 6737095 6737130 mdg1 28 7442 5 35 '2-3 63.39 3.9 1.0 intron CG3168 - chrX_5_6735001 chrX_6735001 0.40 RAL-176 521 chrX 6755730 6755758 transib4 152 180 11 28 '6-5 78.01 5.9 1.6 3` UTR CG14439 + chrX_11_6755001 chrX_6755001 0.55 RAL-176 522 chrX 6908238 6908467 P-element 2884 2837 24 229 '23-1 50.02 7.0 3.0 intergenic CG14431 + chrX_24_6905001 chrX_6905001 0.96 RAL-176 523 chrX 6960093 6960353 mdg3 246 102 20 260 '18-2 65.08 5.4 3.1 intron,intron CG14431 +,CG32732 - chrX_20_6960001 chrX_6960001 0.90 RAL-176 524 chrX 7155642 7155922 hobo 2937 1 32 280 '1-31 64.51 8.4 3.4 intron CG9650 + chrX_32_7155001 chrX_7155001 0.03 RAL-176 525 chrX 7256732 7256806 roo 409 8670 20 74 '17-3 66.94 7.4 2.4 intron CR44357 - chrX_20_7255001 chrX_7255001 0.85 RAL-176 526 chrX 7931116 7931385 P-element 2820 10 22 269 '1-21 50.05 11.1 1.8 5` UTR CG10777 - chrX_22_7930001 chrX_7930001 0.05 RAL-176 527 chrX 7971021 7971472 P-element 2844 63 18 451 '2-16 45.10 6.8 2.3 intron sn + chrX_18_7970001 chrX_7970001 0.11 RAL-176 528 chrX 8038768 8038789 297 24 6581 14 21 '9-5 63.56 3.4 3.2 3` UTR fs(1)h - chrX_14_8035001 chrX_8035001 0.64 RAL-176 529 chrX 8198762 8198777 roo 408 394 10 15 '5-5 54.95 5.1 1.6 intron sdt + chrX_10_8195001 chrX_8195001 0.50 RAL-176 530 chrX 8685065 8685397 Burdock 1 6381 28 332 '27-1 68.09 13.5 1.9 intron CG11284 + chrX_28_8685001 chrX_8685001 0.96 RAL-176 531 chrX 8939804 8940043 jockey 4773 4803 17 239 '16-1 64.89 8.2 1.8 intron rdgA + chrX_17_8935001 chrX_8935001 0.94 RAL-176 532 chrX 8973796 8973925 mdg3 5198 246 7 129 '2-5 64.58 10.5 0.6 intron,exon,intron rdgA +,CG10962 -,CR43836 - chrX_7_8970001 chrX_8970001 0.29 RAL-176 533 chrX 9118054 9118337 jockey 4982 4783 32 283 '29-3 65.82 11.2 2.6 intergenic AP-1gamma + chrX_32_9115001 chrX_9115001 0.91 RAL-176 534 chrX 9134937 9135171 P-element 191 2759 29 234 '22-7 54.92 8.5 3.1 5` UTR fend - chrX_29_9130001 chrX_9130001 0.76 RAL-176 535 chrX 9202558 9202633 flea 4754 5005 25 75 '19-6 63.63 2.8 6.6 intergenic not near genes chrX_25_9200001 chrX_9200001 0.76 RAL-176 536 chrX 9470612 9470681 pogo 2096 13 4 69 '2-2 63.22 2.3 1.2 intron mgl - chrX_4_9470001 chrX_9470001 0.50 RAL-176 537 chrX 9513458 9513535 1360 1 3388 46 77 '20-26 65.51 8.2 5.0 intron CG32700 - chrX_46_9510001 chrX_9510001 0.43 RAL-176 538 chrX 9525557 9525621 pogo 2089 8 8 64 '4-4 63.77 2.2 2.5 intron CG32700 - chrX_8_9525001 chrX_9525001 0.50 RAL-176 539 chrX 9530241 9530400 297 6541 387 9 159 '1-8 64.44 1.5 3.6 intron CG32700 - chrX_9_9530001 chrX_9530001 0.11 RAL-176 540 chrX 10425721 10425800 297 1 392 17 79 '9-8 69.40 5.6 2.6 intron CG32683 - chrX_17_10425001 chrX_10425001 0.53 RAL-176 541 chrX 10651754 10651796 hobo 32 127 18 42 '12-6 68.47 2.5 5.1 intron X11Lbeta + chrX_18_10650001 chrX_10650001 0.67 RAL-176 542 chrX 10652924 10653010 mdg3 5250 249 15 86 '10-5 65.45 3.4 3.4 intron X11Lbeta + chrX_15_10650001 chrX_10650001 0.67 RAL-176 543 chrX 10682895 10682970 pogo 8 2100 8 75 '1-7 67.50 2.4 2.4 intron X11Lbeta + chrX_8_10680001 chrX_10680001 0.12 RAL-176 544 chrX 10973891 10973950 pogo 7 2096 12 59 '6-6 67.16 2.6 3.3 intron CG42339 - chrX_12_10970001 chrX_10970001 0.50 RAL-176 545 chrX 11143368 11143431 mdg3 5219 5476 4 63 '3-1 63.61 9.6 0.4 exon CG15202 + chrX_4_11140001 chrX_11140001 0.75 RAL-176 546 chrX 11205322 11205404 roo 8663 409 11 82 '4-7 71.34 4.3 2.1 intergenic not near genes chrX_11_11205001 chrX_11205001 0.36 RAL-176 547 chrX 11278088 11278143 3S18 6079 5761 18 55 '5-13 67.16 6.0 2.6 intron CG44422 - chrX_18_11275001 chrX_11275001 0.28 RAL-176 548 chrX 11445812 11445880 mdg3 5474 33 10 68 '2-8 67.87 1.8 3.6 intron,3` UTR Evi5 -,Sk1 + chrX_10_11445001 chrX_11445001 0.20 RAL-176 549 chrX 11472574 11472742 roo 314 5 17 168 '1-16 65.31 5.7 2.5 intron CG43155 + chrX_17_11470001 chrX_11470001 0.06 RAL-176 550 chrX 12077572 12077611 jockey 4641 4693 10 39 '2-8 58.14 9.7 0.9 intron,intron CR43960 +,Ten-a + chrX_10_12075001 chrX_12075001 0.20 RAL-176 551 chrX 12282687 12282767 Tirant 400 8112 7 80 '4-3 66.60 8.0 0.8 intron Ten-a + chrX_7_12280001 chrX_12280001 0.57 RAL-176 552 chrX 12352559 12352738 3S18 5771 44 4 179 '3-1 60.97 4.3 0.8 intergenic not near genes chrX_4_12350001 chrX_12350001 0.75 RAL-176 553 chrX 12555797 12555935 hobo 197 2914 20 138 '1-19 62.10 5.6 3.0 intron CG43921 - chrX_20_12555001 chrX_12555001 0.05 RAL-176 554 chrX 13012694 13012995 mdg3 5193 5454 24 301 '23-1 62.72 6.0 3.4 intron rad + chrX_24_13010001 chrX_13010001 0.96 RAL-176 555 chrX 13433588 13433890 jockey 4985 4986 12 302 '10-2 59.98 4.3 2.3 intergenic not near genes chrX_12_13430001 chrX_13430001 0.83 RAL-176 556 chrX 13441797 13441843 Juan 4198 6 9 46 '6-3 66.16 2.6 2.5 intergenic not near genes chrX_9_13440001 chrX_13440001 0.67 RAL-176 557 chrX 14602566 14602635 P-element 2883 2883 19 69 '9-10 48.67 9.3 1.8 5` UTR CG9413 - chrX_19_14600001 chrX_14600001 0.47 RAL-176 558 chrX 14646014 14646105 hobo 2694 2 21 91 '2-19 69.60 7.1 2.6 intron NetA - chrX_21_14645001 chrX_14645001 0.10 RAL-176 559 chrX 15250501 15250579 mdg3 245 5253 15 78 '7-8 63.61 4.9 2.5 intergenic not near genes chrX_15_15250001 chrX_15250001 0.47 RAL-176 560 chrX 15261443 15261506 Stalker4 391 6955 6 63 '1-5 68.52 2.6 1.7 intergenic not near genes chrX_6_15260001 chrX_15260001 0.17 RAL-176 561 chrX 15746127 15746320 jockey2 3229 3229 8 193 '1-7 66.73 6.8 1.0 5` UTR CG8944 - chrX_8_15745001 chrX_15745001 0.12 RAL-176 562 chrX 16092881 16092967 HMS-Beagle 248 6794 30 86 '15-15 65.09 9.5 2.9 intergenic CG42353 -,CG42354 - chrX_30_16090001 chrX_16090001 0.50 RAL-176 563 chrX 16690124 16690245 297 389 6778 10 121 '5-5 68.39 0.6 6.2 intron Sep4 - chrX_10_16690001 chrX_16690001 0.50 RAL-176 564 chrX 16737119 16737150 jockey 6 28 15 31 '7-8 61.50 7.2 1.8 intron CG9634 - chrX_15_16735001 chrX_16735001 0.47 RAL-176 565 chrX 16835576 16835634 P-element 7 2875 10 58 '6-4 50.90 4.3 1.9 intergenic CG13004 - chrX_10_16835001 chrX_16835001 0.60 RAL-176 566 chrX 16998366 16998513 mdg3 33 5253 13 147 '12-1 62.90 3.2 3.1 intron CG45002 - chrX_13_16995001 chrX_16995001 0.92 RAL-176 567 chrX 17054067 17054166 hobo 296 2936 24 99 '8-16 67.06 6.9 3.0 intron CG45002 - chrX_24_17050001 chrX_17050001 0.33 RAL-176 568 chrX 17092572 17092617 I-element 5343 1 7 45 '1-6 46.09 1.1 3.3 intron,intron CG16700 +,CG4991 + chrX_7_17090001 chrX_17090001 0.14 RAL-176 569 chrX 17608215 17608248 mdg3 5285 5251 12 33 '5-7 63.42 4.3 2.3 intergenic not near genes chrX_12_17605001 chrX_17605001 0.42 RAL-176 570 chrX 17787188 17787265 mdg3 5497 5254 12 77 '4-8 63.62 2.2 3.8 intergenic not near genes chrX_12_17785001 chrX_17785001 0.33 RAL-176 571 chrX 17837968 17838045 S-element 5 1714 12 77 '5-7 64.80 7.3 1.4 intron CG6398 + chrX_12_17835001 chrX_17835001 0.42 RAL-176 572 chrX 18237367 18237396 accord 7029 186 8 29 '5-3 73.88 12.4 0.6 intergenic not near genes chrX_8_18235001 chrX_18235001 0.62 RAL-176 573 chrX 18398438 18398498 roo 9068 17 22 60 '17-5 66.53 6.3 3.0 intron CG32549 - chrX_22_18395001 chrX_18395001 0.77 RAL-176 574 chrX 18409444 18409509 BS 5075 4878 12 65 '6-6 64.64 4.1 2.4 intron CG32549 - chrX_12_18405001 chrX_18405001 0.50 RAL-176 575 chrX 19038353 19038493 hobo 84 31 19 140 '1-18 64.20 5.9 2.8 intergenic not near genes chrX_19_19035001 chrX_19035001 0.05 RAL-176 576 chrX 19087951 19088024 flea 248 4758 12 73 '10-2 62.49 3.8 2.5 intergenic not near genes chrX_12_19085001 chrX_19085001 0.83 RAL-176 577 chrX 19100178 19100233 jockey 4991 9 17 55 '2-15 56.93 14.2 1.1 intergenic not near genes chrX_17_19100001 chrX_19100001 0.12 RAL-176 578 chrX 19176030 19176257 1360 3375 3251 53 227 '8-45 64.85 7.9 6.0 intergenic CG7556 - chrX_53_19175001 chrX_19175001 0.15 RAL-176 579 chrX 19305795 19305868 mdg3 5255 241 16 73 '13-3 60.91 4.2 3.1 intron CG8051 - chrX_16_19305001 chrX_19305001 0.81 RAL-176 580 chrX 19310284 19310305 jockey 30 9 6 21 '3-3 64.14 3.8 1.2 intergenic out - chrX_6_19310001 chrX_19310001 0.50 RAL-176 581 chrX 19368335 19368373 FB 2 34 14 38 '10-4 62.88 8.4 1.5 intron kek5 + chrX_14_19365001 chrX_19365001 0.71 RAL-176 582 chrX 19485698 19485778 roo 8666 410 37 80 '16-21 67.18 5.5 5.7 intergenic pcm -,CR43260 - chrX_37_19485001 chrX_19485001 0.43 RAL-176 583 chrX 19504715 19504774 hopper 2 20 18 59 '13-5 64.91 5.1 3.0 intron,intron CG14200 +,Pfrx + chrX_18_19500001 chrX_19500001 0.72 RAL-176 584 chrX 19697141 19697169 Tc1 1611 1581 4 28 '2-2 67.16 23.2 0.2 5` UTR Cdc42 + chrX_4_19695001 chrX_19695001 0.50 RAL-176 585 chrX 20266814 20266838 BS 4993 4969 6 24 '2-4 61.20 8.3 0.6 intergenic not near genes chrX_6_20265001 chrX_20265001 0.33 RAL-176 586 chrX 20599095 20599164 pogo 27 2100 14 69 '3-11 72.18 2.6 3.9 intron RunxA - chrX_14_20595001 chrX_20595001 0.21 RAL-176 587 chrX 20810171 20810473 pogo 2087 2 14 302 '1-13 66.72 1.8 5.0 intron shakB - chrX_14_20810001 chrX_20810001 0.07 RAL-176 588 chrX 20877240 20877294 roo 8674 9055 8 54 '4-4 70.19 3.5 1.8 intron shakB - chrX_8_20875001 chrX_20875001 0.50 RAL-176 589 chrX 20971131 20971204 297 6968 2 11 73 '6-5 66.85 2.3 3.3 intergenic not near genes chrX_11_20970001 chrX_20970001 0.55 RAL-176 590 chrX 21079229 21079299 mdg3 5492 5257 13 70 '4-9 65.17 7.9 1.5 intron bves + chrX_13_21075001 chrX_21075001 0.31 RAL-176 591 chrX 21087580 21087632 mdg3 5251 5479 16 52 '10-6 66.09 1.2 7.3 intergenic not near genes chrX_16_21085001 chrX_21085001 0.62 RAL-176 592 chrX 21117771 21117848 blood 7010 372 14 77 '7-7 60.72 1.6 5.4 intron CG15445 + chrX_14_21115001 chrX_21115001 0.50 RAL-176 593 chrX 21122883 21122905 Bari1 1680 1703 4 22 '2-2 63.55 6.3 0.5 intergenic not near genes chrX_4_21120001 chrX_21120001 0.50 RAL-176 594 chrX 21204990 21205070 1360 4 3388 19 80 '4-15 70.25 2.6 5.3 intergenic CG32521 - chrX_19_21200001 chrX_21200001 0.21 RAL-176 595 chrX 21403215 21403298 roo 8661 413 29 83 '12-17 69.66 4.7 5.1 intergenic CG1678 - chrX_29_21400001 chrX_21400001 0.41 RAL-176 596 chrX 21476153 21476234 297 1 394 18 81 '8-10 67.39 3.2 4.3 intergenic not near genes chrX_18_21475001 chrX_21475001 0.44 RAL-176 597 chrX 21667899 21667932 gypsy2 6524 6491 23 33 '15-8 67.42 19.0 1.1 intergenic not near genes chrX_23_21665001 chrX_21665001 0.65 RAL-176 598 chrX 21772469 21772497 springer 21 20 11 28 '4-7 55.73 4.4 2.0 intergenic not near genes chrX_11_21770001 chrX_21770001 0.36 RAL-176 599 chrX 21772480 21772497 gypsy3 6585 6569 13 17 '3-10 58.85 5.6 2.0 intergenic not near genes chrX_13_21770001 chrX_21770001 0.23 RAL-176 600 chrX 21933827 21933845 gypsy11 392 379 8 18 '3-5 55.58 32.2 0.2 intergenic not near genes chrX_8_21930001 chrX_21930001 0.38 RAL-176 601 chrX 21999975 22000056 Quasimodo 336 7048 10 81 '6-4 69.17 0.0 10.0 intergenic not near genes chrX_10_21995001 chrX_21995001 0.60 RAL-176 602 chrX 22485068 22485091 INE-1 538 558 6 23 '4-2 73.36 1.0 3.0 intron Cp110 + chrX_6_22485001 chrX_22485001 0.67 RAL-176 603 chrX 22517613 22517680 1360 24 1 16 67 '3-13 55.05 1.2 7.3 intron CG17600 + chrX_16_22515001 chrX_22515001 0.19 RAL-176 604 chrX 22578018 22578113 297 6958 6588 18 95 '7-11 67.49 4.4 3.3 intergenic not near genes chrX_18_22575001 chrX_22575001 0.39 RAL-176 605 chrX 22754277 22754300 hopper 1299 1355 4 23 '2-2 66.34 30.7 0.1 intron CR44997 + chrX_4_22750001 chrX_22750001 0.50 RAL-176 606 chrX 22852511 22852570 pogo 2080 2 5 59 '1-4 67.00 4.0 1.0 intron,intron fog -,CG42346 + chrX_5_22850001 chrX_22850001 0.20 RAL-176 607 chrX 22916257 22916407 Transpac 1 5092 11 150 '10-1 66.05 3.1 2.7 intergenic not near genes chrX_11_22915001 chrX_22915001 0.91 RAL-176 608 chrX 23078537 23078698 INE-1 301 554 5 161 '1-4 78.10 5.1 0.8 intron CG17167 + chrX_5_23075001 chrX_23075001 0.20 RAL-176 609 chrY 887425 887467 1360 256 10 4 42 '3-1 72.72 59.5 0.1 intergenic not near genes chrY_4_885001 chrY_885001 0.75 RAL-176 610 chrY 917800 917823 1360 30 440 5 23 '2-3 71.24 15.7 0.3 3` UTR Su(Ste):CR42430 - chrY_5_915001 chrY_915001 0.40 RAL-176 611 chrY 975834 975886 1360 4 22 4 52 '2-2 64.47 76.2 0.1 intergenic not near genes chrY_4_975001 chrY_975001 0.50 RAL-176 612 chrY 2616966 2617258 Max-element 18 8508 4 292 '1-3 62.82 1.5 1.6 intergenic not near genes chrY_4_2615001 chrY_2615001 0.25 RAL-176 613 chrY 3069805 3069833 I-element 23 5339 10 28 '7-3 70.47 0.0 10.0 intergenic not near genes chrY_10_3065001 chrY_3065001 0.70 RAL-176