SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 467356 467363 chr2L 467455 467459 4 98 9.5 8.0 8.8 0.4 103 chr2L 467356 intron CG4297 - chr2L 467408 intron CG4297 - chr2L 467459 intron CG4297 - chr2L_4_465001 chr2L_465001 RAL-153 2 chr2L 590635 590652 chr2L 590719 590740 7 90 3.0 1.5 2.2 2.2 105 chr2L 590635 intron Gsc - chr2L 590688 intron Gsc - chr2L 590740 intron Gsc - chr2L_7_590001 chr2L_590001 RAL-153 3 chr2L 748210 748237 chr2L 748283 748315 4 77 2.5 2.5 2.5 1.1 105 chr2L 748210 intergenic not near genes chr2L 748262 intergenic not near genes chr2L 748315 intergenic not near genes chr2L_4_745001 chr2L_745001 RAL-153 4 chr2L 764565 764572 chr2L 764663 764672 4 100 0.5 0.0 0.2 3.3 107 chr2L 764565 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764672 intergenic not near genes chr2L_4_760001 chr2L_760001 RAL-153 5 chr2L 795273 795283 chr2L 795373 795384 4 105 1.0 0.0 0.5 2.7 111 chr2L 795273 intergenic not near genes chr2L 795328 intergenic not near genes chr2L 795384 intergenic not near genes chr2L_4_795001 chr2L_795001 RAL-153 6 chr2L 877843 877866 chr2L 877923 877941 5 77 3.5 2.0 2.8 1.3 98 chr2L 877843 3` UTR,exon CG15824 -,ninaA + chr2L 877892 3` UTR,intron CG15824 -,ninaA + chr2L 877941 3` UTR,intron CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-153 7 chr2L 976885 976909 chr2L 984520 984545 roo 9 7635 1.0 3.5 2.2 2.8 7660 chr2L 976885 intergenic not near genes chr2L 980715 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_9_980001 chr2L_980001 RAL-153 8 chr2L 1156866 1156872 chr2L 1156970 1156971 4 103 6.0 3.5 4.8 0.7 105 chr2L 1156866 intron capt - chr2L 1156918 intron capt - chr2L 1156971 intron capt - chr2L_4_1155001 chr2L_1155001 RAL-153 9 chr2L 1164251 1164272 chr2L 1164337 1164358 5 86 3.5 2.5 3.0 1.2 107 chr2L 1164251 intergenic IntS14 +,CG5080 - chr2L 1164304 intergenic IntS14 +,CG5080 - chr2L 1164358 intergenic IntS14 +,CG5080 - chr2L_5_1160001 chr2L_1160001 RAL-153 10 chr2L 1220140 1220162 chr2L 1227606 1227628 blood 4 7465 1.0 0.5 0.8 2.2 7488 chr2L 1220140 intron CG42329 + chr2L 1223884 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-153 11 chr2L 1276347 1276373 chr2L 1276426 1276451 4 78 1.0 0.0 0.5 2.7 104 chr2L 1276347 intron robo3 + chr2L 1276399 intron robo3 + chr2L 1276451 intron robo3 + chr2L_4_1275001 chr2L_1275001 RAL-153 12 chr2L 1699268 1699292 chr2L 1699339 1699375 4 80 0.0 1.0 0.5 2.7 107 chr2L 1699268 3` UTR chinmo + chr2L 1699322 3` UTR chinmo + chr2L 1699375 3` UTR chinmo + chr2L_4_1695001 chr2L_1695001 RAL-153 13 chr2L 1711354 1711384 chr2L 1711678 1711707 mdg3 18 319 7.5 4.5 6.0 2.6 353 chr2L 1711354 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711530 3` UTR frtz - chr2L 1711707 3` UTR frtz - chr2L_18_1710001 chr2L_1710001 RAL-153 14 chr2L 1721830 1721847 chr2L 1721914 1721915 7 81 0.0 1.5 0.8 3.9 85 chr2L 1721830 intron Rim2 - chr2L 1721872 intron Rim2 - chr2L 1721915 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-153 15 chr2L 1944205 1944217 chr2L 1944285 1944299 4 82 0.0 0.0 0.0 4.0 94 chr2L 1944205 intergenic CG7337 + chr2L 1944252 intergenic CG7337 + chr2L 1944299 intergenic CG7337 + chr2L_4_1940001 chr2L_1940001 RAL-153 16 chr2L 1993196 1993222 chr2L 1993281 1993296 4 82 0.0 1.0 0.5 2.7 100 chr2L 1993196 intergenic not near genes chr2L 1993246 intergenic not near genes chr2L 1993296 intergenic not near genes chr2L_4_1990001 chr2L_1990001 RAL-153 17 chr2L 2053740 2053774 chr2L 2053817 2053839 5 71 4.0 2.0 3.0 1.2 99 chr2L 2053740 intergenic not near genes chr2L 2053790 intergenic not near genes chr2L 2053839 intergenic not near genes chr2L_5_2050001 chr2L_2050001 RAL-153 18 chr2L 2100378 2100407 chr2L 2109523 2109554 roo 5 9148 1.0 0.0 0.5 3.3 9176 chr2L 2100378 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109554 intron dpr3 - chr2L_5_2100001 chr2L_2100001 RAL-153 19 chr2L 2618037 2618060 chr2L 2618116 2618139 7 78 2.0 2.0 2.0 2.3 102 chr2L 2618037 intergenic not near genes chr2L 2618088 intergenic not near genes chr2L 2618139 intergenic not near genes chr2L_7_2615001 chr2L_2615001 RAL-153 20 chr2L 2713522 2713542 chr2L 2713616 2713641 6 96 3.5 3.0 3.2 1.4 119 chr2L 2713522 intron CG31690 + chr2L 2713582 intron CG31690 + chr2L 2713641 intron CG31690 + chr2L_6_2710001 chr2L_2710001 RAL-153 21 chr2L 2804239 2804262 chr2L 2804327 2804327 7 85 4.0 1.5 2.8 1.8 88 chr2L 2804239 intergenic not near genes chr2L 2804283 intergenic not near genes chr2L 2804327 intergenic not near genes chr2L_7_2800001 chr2L_2800001 RAL-153 22 chr2L 2937432 2937452 chr2L 2937509 2937529 5 77 1.5 1.0 1.2 2.3 97 chr2L 2937432 intron lilli + chr2L 2937480 intron lilli + chr2L 2937529 intron lilli + chr2L_5_2935001 chr2L_2935001 RAL-153 23 chr2L 3073039 3073064 chr2L 3078242 3078267 copia 4 5202 2.5 2.5 2.5 1.1 5228 chr2L 3073039 intron toc - chr2L 3075653 intron toc - chr2L 3078267 intron toc - chr2L_4_3075001 chr2L_3075001 RAL-153 24 chr2L 3192221 3192240 chr2L 3192318 3192349 5 105 2.5 5.0 3.8 1.0 128 chr2L 3192221 intron CG34393 - chr2L 3192285 intron CG34393 - chr2L 3192349 intron CG34393 - chr2L_5_3190001 chr2L_3190001 RAL-153 25 chr2L 3323280 3323283 chr2L 3323368 3323390 4 102 1.0 3.0 2.0 1.3 110 chr2L 3323280 intergenic CG8837 + chr2L 3323335 intergenic CG8837 + chr2L 3323390 intergenic CG8837 + chr2L_4_3320001 chr2L_3320001 RAL-153 26 chr2L 3707575 3707595 chr2L 3707659 3707679 5 82 1.5 2.0 1.8 1.8 104 chr2L 3707575 exon cutlet - chr2L 3707627 intron cutlet - chr2L 3707679 intron cutlet - chr2L_5_3705001 chr2L_3705001 RAL-153 27 chr2L 3891894 3891912 chr2L 3891978 3891996 6 82 4.5 2.5 3.5 1.3 102 chr2L 3891894 intron capu - chr2L 3891945 intron capu - chr2L 3891996 intron capu - chr2L_6_3890001 chr2L_3890001 RAL-153 28 chr2L 4128699 4128732 chr2L 4128795 4128824 6 92 1.5 3.0 2.2 1.9 125 chr2L 4128699 intergenic not near genes chr2L 4128762 intergenic not near genes chr2L 4128824 intergenic not near genes chr2L_6_4125001 chr2L_4125001 RAL-153 29 chr2L 4390026 4390040 chr2L 4390100 4390118 5 76 2.0 4.0 3.0 1.2 92 chr2L 4390026 intron Tps1 + chr2L 4390072 intron Tps1 + chr2L 4390118 intron Tps1 + chr2L_5_4390001 chr2L_4390001 RAL-153 30 chr2L 4437225 4437240 chr2L 4437304 4437314 4 78 0.0 0.5 0.2 3.3 89 chr2L 4437225 intron CG15431 - chr2L 4437270 intron CG15431 - chr2L 4437314 intron CG15431 - chr2L_4_4435001 chr2L_4435001 RAL-153 31 chr2L 4681295 4681319 chr2L 4681558 4681583 5 260 2.0 2.0 2.0 1.7 288 chr2L 4681295 intergenic not near genes chr2L 4681439 intergenic not near genes chr2L 4681583 intergenic not near genes chr2L_5_4680001 chr2L_4680001 RAL-153 32 chr2L 4869472 4869498 chr2L 4869550 4869574 8 78 1.5 1.5 1.5 3.2 102 chr2L 4869472 intron pog + chr2L 4869523 intron pog + chr2L 4869574 intron pog + chr2L_8_4865001 chr2L_4865001 RAL-153 33 chr2L 4892891 4892895 chr2L 4892973 4892976 4 82 0.0 2.5 1.2 1.8 85 chr2L 4892891 intron CG3036 + chr2L 4892934 intron CG3036 + chr2L 4892976 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-153 34 chr2L 4953516 4953543 chr2L 4953756 4953784 pogo 7 241 4.5 2.5 3.5 1.6 268 chr2L 4953516 intergenic Jon25Bii - chr2L 4953650 intergenic not near genes chr2L 4953784 intergenic Jon25Bi - chr2L_7_4950001 chr2L_4950001 RAL-153 35 chr2L 5040693 5040716 chr2L 5040789 5040812 10 96 3.5 3.0 3.2 2.4 119 chr2L 5040693 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040752 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040812 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L_10_5040001 chr2L_5040001 RAL-153 36 chr2L 5242915 5242937 chr2L 16217660 16217660 5 10974728 13.0 10.0 11.5 0.4 10974745 chr2L 5242915 intron tkv - chr2L 10730288 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_5_10730001 chr2L_10730001 RAL-153 37 chr2L 5672171 5672200 chr2L 5672252 5672281 5 76 0.0 1.5 0.8 2.8 110 chr2L 5672171 intergenic not near genes chr2L 5672226 intergenic not near genes chr2L 5672281 intergenic not near genes chr2L_5_5670001 chr2L_5670001 RAL-153 38 chr2L 5805220 5805253 chr2L 5805339 5805370 15 118 2.0 0.5 1.2 6.8 150 chr2L 5805220 intergenic CG11034 + chr2L 5805295 intergenic CG11034 + chr2L 5805370 intergenic CG11034 + chr2L_15_5805001 chr2L_5805001 RAL-153 39 chr2L 5825072 5825101 chr2L 5825156 5825195 5 92 1.0 0.0 0.5 3.3 123 chr2L 5825072 5` UTR TrissinR + chr2L 5825134 5` UTR TrissinR + chr2L 5825195 5` UTR TrissinR + chr2L_5_5825001 chr2L_5825001 RAL-153 40 chr2L 5827713 5827731 chr2L 5836719 5836720 roo 4 8998 2.0 1.5 1.8 1.4 9007 chr2L 5827713 intron TrissinR + chr2L 5832216 intron TrissinR + chr2L 5836720 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-153 41 chr2L 5926346 5926616 chr2L 5926466 5926695 4 89 0.5 0.0 0.2 3.3 349 chr2L 5926346 intron dsf + chr2L 5926520 intron dsf + chr2L 5926695 intron dsf + chr2L_4_5925001 chr2L_5925001 RAL-153 42 chr2L 6025403 6025426 chr2L 6025479 6025501 5 75 2.0 3.0 2.5 1.4 98 chr2L 6025403 intergenic CG9109 - chr2L 6025452 intergenic CG9109 - chr2L 6025501 intergenic CG9109 - chr2L_5_6025001 chr2L_6025001 RAL-153 43 chr2L 6050448 6050463 chr2L 6050552 6050567 6 102 6.5 1.0 3.8 1.2 119 chr2L 6050448 intergenic CG12393 +,CG9135 + chr2L 6050508 intergenic CG12393 +,CG9135 + chr2L 6050567 intergenic CG12393 +,CG9135 + chr2L_6_6050001 chr2L_6050001 RAL-153 44 chr2L 6185443 6185472 chr2L 6185520 6185550 5 70 0.5 1.5 1.0 2.5 107 chr2L 6185443 intron CG34380 + chr2L 6185496 intron CG34380 + chr2L 6185550 intron CG34380 + chr2L_5_6185001 chr2L_6185001 RAL-153 45 chr2L 6363160 6363181 chr2L 6366076 6366084 Burdock 7 2913 1.5 2.5 2.0 2.3 2924 chr2L 6363160 intergenic not near genes chr2L 6364622 intergenic not near genes chr2L 6366084 intergenic not near genes chr2L_7_6360001 chr2L_6360001 RAL-153 46 chr2L 6426871 6426888 chr2L 6445115 6445147 roo 4 18255 3.0 3.5 3.2 1.0 18276 chr2L 6426871 3` UTR CG9527 - chr2L 6436009 intron CG9527 - chr2L 6445147 exon CG9527 - chr2L_4_6435001 chr2L_6435001 RAL-153 47 chr2L 6463553 6463583 chr2L 6463645 6463674 9 89 10.5 3.0 6.8 1.2 121 chr2L 6463553 exon CG16947 - chr2L 6463614 exon CG16947 - chr2L 6463674 exon CG16947 - chr2L_9_6460001 chr2L_6460001 RAL-153 48 chr2L 6470669 6470691 chr2L 6470760 6470781 6 87 1.0 0.5 0.8 3.3 112 chr2L 6470669 intron mmy - chr2L 6470725 intron mmy - chr2L 6470781 intron mmy - chr2L_6_6470001 chr2L_6470001 RAL-153 49 chr2L 6514837 6514861 chr2L 6514936 6514951 6 98 4.0 3.0 3.5 1.3 114 chr2L 6514837 intron CG31637 + chr2L 6514894 intron CG31637 + chr2L 6514951 intron CG31637 + chr2L_6_6510001 chr2L_6510001 RAL-153 50 chr2L 6640910 6640922 chr2L 6641000 6641014 6 90 6.0 2.5 4.2 1.2 104 chr2L 6640910 exon CG31635 - chr2L 6640962 intron CG31635 - chr2L 6641014 intron CG31635 - chr2L_6_6640001 chr2L_6640001 RAL-153 51 chr2L 6724447 6724478 chr2L 6724525 6724559 6 80 2.0 3.0 2.5 1.7 112 chr2L 6724447 intron Liprin-alpha + chr2L 6724503 intron Liprin-alpha + chr2L 6724559 intron Liprin-alpha + chr2L_6_6720001 chr2L_6720001 RAL-153 52 chr2L 6836506 6836516 chr2L 6836588 6836598 4 82 5.5 2.0 3.8 0.8 92 chr2L 6836506 intron sens-2 + chr2L 6836552 intron sens-2 + chr2L 6836598 intron sens-2 + chr2L_4_6835001 chr2L_6835001 RAL-153 53 chr2L 6950161 6950190 chr2L 6950366 6950391 10 204 3.5 3.5 3.5 2.2 230 chr2L 6950161 5` UTR Gas41 - chr2L 6950276 intergenic Gas41 -,SA + chr2L 6950391 intergenic SA +,Gas41 - chr2L_10_6950001 chr2L_6950001 RAL-153 54 chr2L 7089880 7089906 chr2L 7089990 7089994 4 103 0.0 1.0 0.5 2.7 114 chr2L 7089880 intergenic not near genes chr2L 7089937 intergenic not near genes chr2L 7089994 intergenic not near genes chr2L_4_7085001 chr2L_7085001 RAL-153 55 chr2L 7343335 7343349 chr2L 7350450 7350465 roo 4 7115 2.5 4.0 3.2 1.0 7130 chr2L 7343335 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350465 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-153 56 chr2L 7461049 7461080 chr2L 7461304 7461334 4 254 0.5 1.0 0.8 2.2 285 chr2L 7461049 intron Gr28b - chr2L 7461192 intron Gr28b - chr2L 7461334 intron Gr28b - chr2L_4_7460001 chr2L_7460001 RAL-153 57 chr2L 7493672 7493704 chr2L 7493882 7493913 4 210 0.5 0.5 0.5 2.7 241 chr2L 7493672 intron Ziz - chr2L 7493792 intron Ziz - chr2L 7493913 intron Ziz - chr2L_4_7490001 chr2L_7490001 RAL-153 58 chr2L 7567932 7567956 chr2L 7568007 7568032 4 76 1.0 3.0 2.0 1.3 100 chr2L 7567932 intron RapGAP1 - chr2L 7567982 intron RapGAP1 - chr2L 7568032 intron RapGAP1 - chr2L_4_7565001 chr2L_7565001 RAL-153 59 chr2L 7916166 7916200 chr2L 7916426 7916461 14 260 5.0 5.5 5.2 2.3 295 chr2L 7916166 intron Snoo - chr2L 7916314 intron Snoo - chr2L 7916461 intron Snoo - chr2L_14_7915001 chr2L_7915001 RAL-153 60 chr2L 7977090 7977112 chr2L 7984066 7984071 297 6 6970 2.0 1.5 1.8 2.1 6981 chr2L 7977090 intron Snoo - chr2L 7980580 intron Snoo - chr2L 7984071 intron,5` UTR Snoo -,CG7231 + chr2L_6_7980001 chr2L_7980001 RAL-153 61 chr2L 8003055 8003064 chr2L 8003113 8003144 4 74 2.5 3.5 3.0 1.0 89 chr2L 8003055 intron Wwox - chr2L 8003100 intron Wwox - chr2L 8003144 intron Wwox - chr2L_4_8000001 chr2L_8000001 RAL-153 62 chr2L 8034425 8034457 chr2L 8034519 8034537 8 90 3.0 6.0 4.5 1.5 112 chr2L 8034425 intron,intron CG7367 -,Cka + chr2L 8034481 intron,intron CG7367 -,Cka + chr2L 8034537 intron,intron CG7367 -,Cka + chr2L_8_8030001 chr2L_8030001 RAL-153 63 chr2L 8098427 8098444 chr2L 8098809 8098826 5 382 1.5 0.5 1.0 2.5 399 chr2L 8098427 intron Bsg + chr2L 8098626 intron Bsg + chr2L 8098826 intron Bsg + chr2L_5_8095001 chr2L_8095001 RAL-153 64 chr2L 8258180 8258198 chr2L 8258275 8258295 5 96 1.0 0.5 0.8 2.8 115 chr2L 8258180 intergenic Btk29A -,mir-2b-1 - chr2L 8258238 intergenic Btk29A -,mir-2b-1 - chr2L 8258295 intergenic Btk29A -,mir-2b-1 - chr2L_5_8255001 chr2L_8255001 RAL-153 65 chr2L 8288693 8288702 chr2L 8288773 8288790 4 89 0.0 0.0 0.0 4.0 97 chr2L 8288693 intron Btk29A - chr2L 8288742 intron Btk29A - chr2L 8288790 intron Btk29A - chr2L_4_8285001 chr2L_8285001 RAL-153 66 chr2L 8332725 8332755 chr2L 8332806 8332836 10 80 2.0 0.5 1.2 4.5 111 chr2L 8332725 3` UTR CG14275 + chr2L 8332780 3` UTR CG14275 + chr2L 8332836 3` UTR CG14275 + chr2L_10_8330001 chr2L_8330001 RAL-153 67 chr2L 8349609 8349631 chr2L 8349712 8349735 13 104 4.5 2.5 3.5 2.9 126 chr2L 8349609 exon CG7778 + chr2L 8349672 intron CG7778 + chr2L 8349735 intron CG7778 + chr2L_13_8345001 chr2L_8345001 RAL-153 68 chr2L 8603009 8603032 chr2L 8603169 8603194 12 160 4.0 0.5 2.2 3.8 185 chr2L 8603009 intron Sema-1a + chr2L 8603102 intron Sema-1a + chr2L 8603194 intron Sema-1a + chr2L_12_8600001 chr2L_8600001 RAL-153 69 chr2L 8723121 8723144 chr2L 8731497 8731521 Tirant 4 8376 1.5 1.5 1.5 1.6 8400 chr2L 8723121 intron raw - chr2L 8727321 intron raw - chr2L 8731521 intron raw - chr2L_4_8725001 chr2L_8725001 RAL-153 70 chr2L 9000293 9000305 chr2L 9007792 9007814 roo 4 7507 3.0 1.0 2.0 1.3 7521 chr2L 9000293 intergenic Try29F + chr2L 9004054 intergenic not near genes chr2L 9007814 intergenic not near genes chr2L_4_9000001 chr2L_9000001 RAL-153 71 chr2L 9084337 9084340 chr2L 16217660 16217660 16 7133321 2.5 10.0 6.2 2.2 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_16_12650001 chr2L_12650001 RAL-153 72 chr2L 9234908 9234930 chr2L 9234990 9235004 4 79 0.0 3.5 1.8 1.4 96 chr2L 9234908 intron tai + chr2L 9234956 intron tai + chr2L 9235004 intron tai + chr2L_4_9230001 chr2L_9230001 RAL-153 73 chr2L 9297377 9297393 chr2L 9297454 9297465 4 74 1.0 1.5 1.2 1.8 88 chr2L 9297377 3` UTR Ggamma30A + chr2L 9297421 3` UTR Ggamma30A + chr2L 9297465 3` UTR Ggamma30A + chr2L_4_9295001 chr2L_9295001 RAL-153 74 chr2L 9303518 9303544 chr2L 9303597 9303624 10 79 1.0 5.5 3.2 2.4 106 chr2L 9303518 intergenic not near genes chr2L 9303571 intergenic not near genes chr2L 9303624 intergenic not near genes chr2L_10_9300001 chr2L_9300001 RAL-153 75 chr2L 9391534 9391560 chr2L 9391700 9391727 4 166 0.5 0.5 0.5 2.7 193 chr2L 9391534 intron,3` UTR Shawl -,Aldh + chr2L 9391630 intron Shawl - chr2L 9391727 intron Shawl - chr2L_4_9390001 chr2L_9390001 RAL-153 76 chr2L 9441683 9441714 chr2L 9441915 9441945 12 226 1.0 2.0 1.5 4.8 262 chr2L 9441683 intron numb + chr2L 9441814 intron numb + chr2L 9441945 intron numb + chr2L_12_9440001 chr2L_9440001 RAL-153 77 chr2L 9460756 9460763 chr2L 9460842 9460849 5 86 9.5 0.0 4.8 0.9 93 chr2L 9460756 intron numb + chr2L 9460802 intron numb + chr2L 9460849 intron numb + chr2L_5_9460001 chr2L_9460001 RAL-153 78 chr2L 9986357 9986383 chr2L 9986450 9986477 7 93 3.5 7.0 5.2 1.1 120 chr2L 9986357 intron bib + chr2L 9986417 intron bib + chr2L 9986477 intron bib + chr2L_7_9985001 chr2L_9985001 RAL-153 79 chr2L 10051727 10051748 chr2L 10051812 10051826 5 80 7.5 3.0 5.2 0.8 99 chr2L 10051727 5` UTR CR44874 + chr2L 10051776 5` UTR CR44874 + chr2L 10051826 5` UTR CR44874 + chr2L_5_10050001 chr2L_10050001 RAL-153 80 chr2L 10105285 10105312 chr2L 10105361 10105387 7 73 2.0 1.0 1.5 2.8 102 chr2L 10105285 intron,intron CG44153 -,CG34109 + chr2L 10105336 intron,intron CG44153 -,CG34109 + chr2L 10105387 intron,intron CG44153 -,CG34109 + chr2L_7_10105001 chr2L_10105001 RAL-153 81 chr2L 10515365 10515389 chr2L 10515457 10515477 4 91 0.0 0.0 0.0 4.0 112 chr2L 10515365 intron,intron CG45083 -,Fatp - chr2L 10515421 intron,intron CG45083 -,Fatp - chr2L 10515477 intron,intron CG45083 -,Fatp - chr2L_4_10515001 chr2L_10515001 RAL-153 82 chr2L 10674422 10674439 chr2L 10674507 10674525 5 85 1.0 0.0 0.5 3.3 103 chr2L 10674422 intergenic not near genes chr2L 10674474 intergenic not near genes chr2L 10674525 intergenic not near genes chr2L_5_10670001 chr2L_10670001 RAL-153 83 chr2L 10688546 10688565 chr2L 10688621 10688635 4 74 1.5 2.0 1.8 1.4 89 chr2L 10688546 intergenic CG7294 - chr2L 10688590 intergenic CG7294 - chr2L 10688635 intergenic CG7294 - chr2L_4_10685001 chr2L_10685001 RAL-153 84 chr2L 10862862 10862875 chr2L 10864455 10864488 Rt1c 6 1602 3.0 2.0 2.5 1.7 1626 chr2L 10862862 3` UTR CR43807 - chr2L 10863675 intron CR43807 - chr2L 10864488 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-153 85 chr2L 11083152 11083169 chr2L 11083229 11083246 7 77 4.0 3.0 3.5 1.6 94 chr2L 11083152 intergenic AstCC - chr2L 11083199 intergenic AstCC - chr2L 11083246 intergenic AstCC - chr2L_7_11080001 chr2L_11080001 RAL-153 86 chr2L 11097868 11097904 chr2L 11097999 11098031 23 126 5.5 5.5 5.5 3.5 163 chr2L 11097868 exon Ge-1 - chr2L 11097950 exon Ge-1 - chr2L 11098031 exon Ge-1 - chr2L_23_11095001 chr2L_11095001 RAL-153 87 chr2L 11491126 11491307 chr2L 11491207 11491432 4 86 9.0 1.5 5.2 0.6 306 chr2L 11491126 intergenic not near genes chr2L 11491279 intergenic not near genes chr2L 11491432 intergenic not near genes chr2L_4_11490001 chr2L_11490001 RAL-153 88 chr2L 11537758 11537781 chr2L 11537874 11537898 4 116 2.5 0.5 1.5 1.6 140 chr2L 11537758 intergenic not near genes chr2L 11537828 intergenic not near genes chr2L 11537898 intergenic not near genes chr2L_4_11535001 chr2L_11535001 RAL-153 89 chr2L 11770608 11770631 chr2L 11770695 11770718 4 87 0.5 1.0 0.8 2.2 110 chr2L 11770608 intergenic not near genes chr2L 11770663 intergenic not near genes chr2L 11770718 intergenic not near genes chr2L_4_11770001 chr2L_11770001 RAL-153 90 chr2L 11841368 11841383 chr2L 11841446 11841461 4 78 2.5 0.0 1.2 1.8 93 chr2L 11841368 intron Pde1c - chr2L 11841414 intron Pde1c - chr2L 11841461 intron Pde1c - chr2L_4_11840001 chr2L_11840001 RAL-153 91 chr2L 12239997 12240023 chr2L 12240078 12240080 5 76 2.0 1.0 1.5 2.0 83 chr2L 12239997 intron aret + chr2L 12240038 intron aret + chr2L 12240080 intron aret + chr2L_5_12240001 chr2L_12240001 RAL-153 92 chr2L 12305412 12305438 chr2L 12305497 12305526 12 86 6.5 3.0 4.8 2.1 114 chr2L 12305412 intron aret + chr2L 12305469 intron aret + chr2L 12305526 intron aret + chr2L_12_12305001 chr2L_12305001 RAL-153 93 chr2L 12396652 12396681 chr2L 12396733 12396758 5 81 4.0 2.5 3.2 1.2 106 chr2L 12396652 3` UTR bru-2 + chr2L 12396705 3` UTR bru-2 + chr2L 12396758 3` UTR bru-2 + chr2L_5_12395001 chr2L_12395001 RAL-153 94 chr2L 12397615 12397638 chr2L 12397935 12397942 5 316 0.0 5.5 2.8 1.3 327 chr2L 12397615 intergenic bru-2 + chr2L 12397778 intergenic bru-2 +,Pkd2 + chr2L 12397942 intergenic Pkd2 +,bru-2 + chr2L_5_12395001 chr2L_12395001 RAL-153 95 chr2L 12682874 12682906 chr2L 12682953 12682984 8 75 3.0 1.0 2.0 2.7 110 chr2L 12682874 intron pdm2 + chr2L 12682929 intron pdm2 + chr2L 12682984 intron pdm2 + chr2L_8_12680001 chr2L_12680001 RAL-153 96 chr2L 12731059 12731088 chr2L 12735825 12735855 F-element 4 4766 1.0 1.0 1.0 2.0 4796 chr2L 12731059 intron MRP + chr2L 12733457 intron MRP + chr2L 12735855 intron MRP + chr2L_4_12730001 chr2L_12730001 RAL-153 97 chr2L 12751331 12751338 chr2L 12751414 12751421 4 82 0.5 2.5 1.5 1.6 90 chr2L 12751331 intergenic not near genes chr2L 12751376 intergenic not near genes chr2L 12751421 intergenic not near genes chr2L_4_12750001 chr2L_12750001 RAL-153 98 chr2L 12791608 12791630 chr2L 12795281 12795304 F-element 4 3671 0.5 0.5 0.5 2.7 3696 chr2L 12791608 intergenic not near genes chr2L 12793456 intergenic not near genes chr2L 12795304 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-153 99 chr2L 12861701 12861729 chr2L 12863161 12863196 hobo 4 1461 0.5 0.5 0.5 2.7 1495 chr2L 12861701 intergenic not near genes chr2L 12862448 intergenic not near genes chr2L 12863196 intergenic not near genes chr2L_4_12860001 chr2L_12860001 RAL-153 100 chr2L 13231890 13231896 chr2L 13232001 13232006 4 111 6.0 4.0 5.0 0.7 116 chr2L 13231890 intergenic Prosalpha6T + chr2L 13231948 intergenic Prosalpha6T + chr2L 13232006 intergenic Prosalpha6T + chr2L_4_13230001 chr2L_13230001 RAL-153 101 chr2L 13231907 13231915 chr2L 13231996 13232026 5 106 2.5 3.0 2.8 1.3 119 chr2L 13231907 intergenic Prosalpha6T + chr2L 13231966 intergenic Prosalpha6T + chr2L 13232026 intergenic Prosalpha6T + chr2L_5_13230001 chr2L_13230001 RAL-153 102 chr2L 13266382 13266407 chr2L 13266469 13266493 5 84 0.5 3.5 2.0 1.7 111 chr2L 13266382 intron CG44085 + chr2L 13266438 intron CG44085 + chr2L 13266493 intron CG44085 + chr2L_5_13265001 chr2L_13265001 RAL-153 103 chr2L 13405652 13405676 chr2L 13410445 13410473 Doc 10 4796 4.5 3.5 4.0 2.0 4821 chr2L 13405652 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410473 intron CG7110 + chr2L_10_13405001 chr2L_13405001 RAL-153 104 chr2L 14017768 14017796 chr2L 14017858 14017888 7 91 1.0 2.0 1.5 2.8 120 chr2L 14017768 intron bgm + chr2L 14017828 intron bgm + chr2L 14017888 intron bgm + chr2L_7_14015001 chr2L_14015001 RAL-153 105 chr2L 15021413 15021427 chr2L 15021620 15021634 6 207 5.5 0.5 3.0 1.5 221 chr2L 15021413 intron GABA-B-R1 + chr2L 15021524 intron GABA-B-R1 + chr2L 15021634 intron GABA-B-R1 + chr2L_6_15020001 chr2L_15020001 RAL-153 106 chr2L 15181436 15181443 chr2L 15181515 15181522 7 78 7.0 8.0 7.5 0.8 86 chr2L 15181436 intron CG4168 - chr2L 15181479 intron CG4168 - chr2L 15181522 intron CG4168 - chr2L_7_15180001 chr2L_15180001 RAL-153 107 chr2L 15181447 15181459 chr2L 15181507 15181538 7 75 3.5 5.0 4.2 1.3 91 chr2L 15181447 intron CG4168 - chr2L 15181492 intron CG4168 - chr2L 15181538 intron CG4168 - chr2L_7_15180001 chr2L_15180001 RAL-153 108 chr2L 15226377 15226395 chr2L 15226449 15226470 6 74 3.0 2.0 2.5 1.7 93 chr2L 15226377 intergenic not near genes chr2L 15226424 intergenic not near genes chr2L 15226470 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-153 109 chr2L 15500866 15500892 chr2L 15501110 15501135 4 241 0.5 0.0 0.2 3.3 269 chr2L 15500866 intron lace + chr2L 15501000 intron lace + chr2L 15501135 intron lace + chr2L_4_15500001 chr2L_15500001 RAL-153 110 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 13 145889 4.5 10.0 7.2 1.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-153 111 chr2L 9084336 9084340 chr2L 16217660 16217660 14 7133321 2.5 10.0 6.2 1.9 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_14_12650001 chr2L_12650001 RAL-153 112 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 4.5 10.0 7.2 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-153 113 chr2L 16381840 16381869 chr2L 16382078 16382107 7 237 2.0 1.5 1.8 2.5 267 chr2L 16381840 intergenic not near genes chr2L 16381974 intergenic not near genes chr2L 16382107 intergenic not near genes chr2L_7_16380001 chr2L_16380001 RAL-153 114 chr2L 16750735 16750755 chr2L 16750816 16750836 5 80 1.5 1.5 1.5 2.0 101 chr2L 16750735 3` UTR CG17912 + chr2L 16750786 3` UTR CG17912 + chr2L 16750836 3` UTR CG17912 + chr2L_5_16750001 chr2L_16750001 RAL-153 115 chr2L 17238860 17239071 chr2L 17239022 17239153 6 105 0.0 0.0 0.0 6.0 293 chr2L 17238860 intron beat-IIIc - chr2L 17239006 intron beat-IIIc - chr2L 17239153 intron beat-IIIc - chr2L_6_17235001 chr2L_17235001 RAL-153 116 chr2L 17951955 17951980 chr2L 17953422 17953447 hobo 7 1467 2.0 2.5 2.2 2.2 1492 chr2L 17951955 intergenic CR44398 -,CR44397 - chr2L 17952701 intergenic not near genes chr2L 17953447 intergenic not near genes chr2L_7_17950001 chr2L_17950001 RAL-153 117 chr2L 18111247 18111261 chr2L 18111338 18111350 5 91 1.5 1.5 1.5 2.0 103 chr2L 18111247 intergenic not near genes chr2L 18111298 intergenic not near genes chr2L 18111350 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-153 118 chr2L 18143472 18143499 chr2L 18143550 18143570 5 72 2.5 5.0 3.8 1.0 98 chr2L 18143472 intron Socs36E - chr2L 18143521 intron Socs36E - chr2L 18143570 intron Socs36E - chr2L_5_18140001 chr2L_18140001 RAL-153 119 chr2L 16217660 16217660 chr2L 18331928 18331928 F-element 4 2114268 8.0 0.0 4.0 0.8 2114268 chr2L 16217660 intergenic not near genes chr2L 17274794 intergenic not near genes chr2L 18331928 intron Fas3 + chr2L_4_17270001 chr2L_17270001 RAL-153 120 chr2L 18555644 18555658 chr2L 18555731 18555741 5 86 0.5 0.0 0.2 4.2 97 chr2L 18555644 intron Pde11 - chr2L 18555692 intron Pde11 - chr2L 18555741 intron Pde11 - chr2L_5_18555001 chr2L_18555001 RAL-153 121 chr2L 18571226 18571261 chr2L 18579311 18579346 5 8085 10.5 5.0 7.8 0.6 8120 chr2L 18571226 intron Pde11 - chr2L 18575286 intron Pde11 - chr2L 18579346 intron Pde11 - chr2L_5_18575001 chr2L_18575001 RAL-153 122 chr2L 16217660 16217660 chr2L 18622718 18622719 16 2405059 8.0 6.5 7.2 2.0 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_16_17420001 chr2L_17420001 RAL-153 123 chr2L 19163253 19163268 chr2L 19163558 19163572 4 304 3.0 0.0 1.5 1.6 319 chr2L 19163253 intron brat + chr2L 19163412 intron brat + chr2L 19163572 intron brat + chr2L_4_19160001 chr2L_19160001 RAL-153 124 chr2L 19544594 19544625 chr2L 19544667 19544673 5 70 6.0 5.0 5.5 0.8 79 chr2L 19544594 exon ref(2)P + chr2L 19544634 exon ref(2)P + chr2L 19544673 exon ref(2)P + chr2L_5_19540001 chr2L_19540001 RAL-153 125 chr2L 19620102 19620130 chr2L 19621089 19621117 jockey 8 987 1.0 3.0 2.0 2.7 1015 chr2L 19620102 intron Lar + chr2L 19620610 intron Lar + chr2L 19621117 intron Lar + chr2L_8_19620001 chr2L_19620001 RAL-153 126 chr2L 19697144 19697170 chr2L 19697231 19697240 6 88 0.0 0.5 0.2 5.0 96 chr2L 19697144 intron Lar + chr2L 19697192 intron Lar + chr2L 19697240 intron Lar + chr2L_6_19695001 chr2L_19695001 RAL-153 127 chr2L 19703546 19703569 chr2L 19712670 19712691 roo 4 9128 1.0 1.0 1.0 2.0 9145 chr2L 19703546 intron Lar + chr2L 19708118 intron Lar + chr2L 19712691 intron Lar + chr2L_4_19705001 chr2L_19705001 RAL-153 128 chr2L 19712692 19712720 chr2L 19712774 19712803 5 77 0.5 1.0 0.8 2.8 111 chr2L 19712692 intron Lar + chr2L 19712748 intron Lar + chr2L 19712803 intron Lar + chr2L_5_19710001 chr2L_19710001 RAL-153 129 chr2L 19762820 19762839 chr2L 19763062 19763080 pogo 5 241 0.5 2.0 1.2 2.3 260 chr2L 19762820 intron fbp - chr2L 19762950 intron fbp - chr2L 19763080 intron fbp - chr2L_5_19760001 chr2L_19760001 RAL-153 130 chr2L 19947725 19947736 chr2L 19947811 19947821 5 86 1.0 3.5 2.2 1.6 96 chr2L 19947725 intron sick + chr2L 19947773 intron sick + chr2L 19947821 intron sick + chr2L_5_19945001 chr2L_19945001 RAL-153 131 chr2L 19973360 19973379 chr2L 19973434 19973456 5 72 3.5 1.0 2.2 1.6 96 chr2L 19973360 intron CG43861 - chr2L 19973408 intron CG43861 - chr2L 19973456 intron CG43861 - chr2L_5_19970001 chr2L_19970001 RAL-153 132 chr2L 20079518 20079543 chr2L 20079638 20079664 4 120 1.0 1.0 1.0 2.0 146 chr2L 20079518 intron,intron neb +,fok - chr2L 20079591 intron,intron neb +,fok - chr2L 20079664 intron,intron neb +,fok - chr2L_4_20075001 chr2L_20075001 RAL-153 133 chr2L 20272128 20272145 chr2L 20282825 20282848 copia 6 10706 2.5 2.5 2.5 1.7 10720 chr2L 20272128 intergenic not near genes chr2L 20277488 intergenic not near genes chr2L 20282848 intergenic not near genes chr2L_6_20275001 chr2L_20275001 RAL-153 134 chr2L 20303167 20303185 chr2L 20310635 20310653 blood 5 7468 0.0 2.0 1.0 2.5 7486 chr2L 20303167 intergenic not near genes chr2L 20306910 intergenic not near genes chr2L 20310653 intergenic not near genes chr2L_5_20305001 chr2L_20305001 RAL-153 135 chr2L 20310881 20310920 chr2L 20310960 20310999 6 79 0.5 3.0 1.8 2.1 118 chr2L 20310881 intergenic spir + chr2L 20310940 intergenic spir + chr2L 20310999 intergenic spir + chr2L_6_20310001 chr2L_20310001 RAL-153 136 chr2L 20372230 20372258 chr2L 20372471 20372496 pogo 4 240 1.5 0.5 1.0 2.0 266 chr2L 20372230 intergenic Ugt37a1 - chr2L 20372363 intergenic Ugt37a1 - chr2L 20372496 exon Ugt37a1 - chr2L_4_20370001 chr2L_20370001 RAL-153 137 chr2L 20376086 20376096 chr2L 20376202 20376214 7 116 1.5 3.5 2.5 2.0 128 chr2L 20376086 intergenic not near genes chr2L 20376150 intergenic not near genes chr2L 20376214 intergenic not near genes chr2L_7_20375001 chr2L_20375001 RAL-153 138 chr2L 20429683 20429705 chr2L 20429796 20429801 4 105 1.0 1.0 1.0 2.0 118 chr2L 20429683 intron CG31688 + chr2L 20429742 intron CG31688 + chr2L 20429801 intron CG31688 + chr2L_4_20425001 chr2L_20425001 RAL-153 139 chr2L 20821500 20821513 chr2L 20821648 20821661 7 147 5.0 0.0 2.5 2.0 161 chr2L 20821500 intergenic not near genes chr2L 20821580 intergenic not near genes chr2L 20821661 intergenic not near genes chr2L_7_20820001 chr2L_20820001 RAL-153 140 chr2L 20967082 20967104 chr2L 20967167 20967189 11 83 3.5 3.0 3.2 2.6 107 chr2L 20967082 3` UTR CG42238 - chr2L 20967136 3` UTR CG42238 - chr2L 20967189 3` UTR CG42238 - chr2L_11_20965001 chr2L_20965001 RAL-153 141 chr2L 21124532 21124563 chr2L 21124617 21124649 6 81 1.0 1.5 1.2 2.7 117 chr2L 21124532 intron Nhe2 + chr2L 21124590 intron Nhe2 + chr2L 21124649 intron Nhe2 + chr2L_6_21120001 chr2L_21120001 RAL-153 142 chr2L 21233965 21233998 chr2L 21234060 21234095 6 95 1.5 1.0 1.2 2.7 130 chr2L 21233965 intron,5` UTR CG31626 -,CR45713 + chr2L 21234030 intron,5` UTR CG31626 -,CR45713 + chr2L 21234095 intron CG31626 - chr2L_6_21230001 chr2L_21230001 RAL-153 143 chr2L 22258622 22258646 chr2L 22260745 22260768 G6 8 2123 2.5 4.5 3.5 1.8 2146 chr2L 22258622 intergenic Tif-IA + chr2L 22259695 intergenic not near genes chr2L 22260768 intergenic not near genes chr2L_8_22255001 chr2L_22255001 RAL-153 144 chr2R 4580203 4580229 chr2R 4580818 4580845 6 618 3.0 2.5 2.8 1.6 642 chr2R 4580203 intergenic not near genes chr2R 4580524 intergenic not near genes chr2R 4580845 intergenic not near genes chr2R_6_4580001 chr2R_4580001 RAL-153 145 chr2R 4656785 4656806 chr2R 4656993 4657016 9 209 13.5 21.0 17.2 0.5 231 chr2R 4656785 intergenic not near genes chr2R 4656900 intergenic not near genes chr2R 4657016 intergenic not near genes chr2R_9_4655001 chr2R_4655001 RAL-153 146 chr2R 5825757 5825782 chr2R 5826152 5826177 5 390 4.0 1.0 2.5 1.4 420 chr2R 5825757 intron dpr12 + chr2R 5825967 intron dpr12 + chr2R 5826177 intron dpr12 + chr2R_5_5825001 chr2R_5825001 RAL-153 147 chr2R 5827071 5827094 chr2R 5827186 5827205 4 114 3.0 1.5 2.2 1.2 134 chr2R 5827071 intron dpr12 + chr2R 5827138 intron dpr12 + chr2R 5827205 intron dpr12 + chr2R_4_5825001 chr2R_5825001 RAL-153 148 chr2R 5838887 5838904 chr2R 5838967 5838990 4 84 2.0 5.5 3.8 0.8 103 chr2R 5838887 intron dpr12 + chr2R 5838938 intron dpr12 + chr2R 5838990 intron dpr12 + chr2R_4_5835001 chr2R_5835001 RAL-153 149 chr2R 6096725 6096741 chr2R 6101919 6101939 BS 4 5193 4.5 3.0 3.8 0.8 5214 chr2R 6096725 intron EcR - chr2R 6099332 intron EcR - chr2R 6101939 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-153 150 chr2R 6120074 6120104 chr2R 6120150 6120180 7 74 1.5 2.5 2.0 2.3 106 chr2R 6120074 intron EcR - chr2R 6120127 intron EcR - chr2R 6120180 intron EcR - chr2R_7_6120001 chr2R_6120001 RAL-153 151 chr2R 6507071 6507095 chr2R 6507156 6507180 4 83 1.5 2.0 1.8 1.4 109 chr2R 6507071 intron jing + chr2R 6507126 intron jing + chr2R 6507180 intron jing + chr2R_4_6505001 chr2R_6505001 RAL-153 152 chr2R 6579775 6579795 chr2R 6584861 6584880 flea 4 5086 2.0 0.5 1.2 1.8 5105 chr2R 6579775 intron jing + chr2R 6582328 intron jing + chr2R 6584880 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-153 153 chr2R 6699600 6699623 chr2R 6699684 6699707 4 84 0.5 0.5 0.5 2.7 107 chr2R 6699600 intergenic Rab2 + chr2R 6699654 intergenic Rab2 + chr2R 6699707 intergenic Rab2 + chr2R_4_6695001 chr2R_6695001 RAL-153 154 chr2R 6741505 6741526 chr2R 6741581 6741603 4 77 0.5 1.5 1.0 2.0 98 chr2R 6741505 intergenic phtf + chr2R 6741554 intergenic phtf + chr2R 6741603 intergenic phtf + chr2R_4_6740001 chr2R_6740001 RAL-153 155 chr2R 6978820 6978838 chr2R 6978954 6978979 4 139 4.5 2.5 3.5 0.9 159 chr2R 6978820 intron vimar - chr2R 6978900 intron vimar - chr2R 6978979 intron vimar - chr2R_4_6975001 chr2R_6975001 RAL-153 156 chr2R 7052034 7052071 chr2R 7052113 7052150 9 77 2.5 1.0 1.8 3.2 116 chr2R 7052034 intergenic lbm + chr2R 7052092 intergenic lbm + chr2R 7052150 intergenic lbm + chr2R_9_7050001 chr2R_7050001 RAL-153 157 chr2R 7120145 7120155 chr2R 7120244 7120253 4 99 2.5 7.0 4.8 0.7 108 chr2R 7120145 intron esn + chr2R 7120199 intron esn + chr2R 7120253 intron esn + chr2R_4_7120001 chr2R_7120001 RAL-153 158 chr2R 7160582 7160586 chr2R 7160639 7160663 4 72 0.0 1.5 0.8 2.2 81 chr2R 7160582 intron pk + chr2R 7160622 intron pk + chr2R 7160663 intron pk + chr2R_4_7160001 chr2R_7160001 RAL-153 159 chr2R 7171269 7171282 chr2R 7171354 7171367 7 85 4.5 2.5 3.5 1.6 98 chr2R 7171269 intron pk + chr2R 7171318 intron pk + chr2R 7171367 intron pk + chr2R_7_7170001 chr2R_7170001 RAL-153 160 chr2R 7196575 7196598 chr2R 7201350 7201358 F-element 5 4771 3.5 0.0 1.8 1.8 4783 chr2R 7196575 intron pk + chr2R 7198966 intron pk + chr2R 7201358 intron pk + chr2R_5_7195001 chr2R_7195001 RAL-153 161 chr2R 7235831 7235843 chr2R 7240915 7240928 jockey 5 5088 3.5 2.0 2.8 1.3 5097 chr2R 7235831 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240928 intergenic not near genes chr2R_5_7235001 chr2R_7235001 RAL-153 162 chr2R 7235844 7235852 chr2R 7240904 7240940 jockey 6 5077 2.5 1.5 2.0 2.0 5096 chr2R 7235844 intergenic not near genes chr2R 7238392 intergenic not near genes chr2R 7240940 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-153 163 chr2R 7253555 7253571 chr2R 7253861 7253886 4 312 0.5 1.5 1.0 2.0 331 chr2R 7253555 intergenic not near genes chr2R 7253720 intergenic not near genes chr2R 7253886 intergenic not near genes chr2R_4_7250001 chr2R_7250001 RAL-153 164 chr2R 7269831 7269861 chr2R 7273942 7273969 12 4110 42.0 71.0 56.5 0.2 4138 chr2R 7269831 intergenic not near genes chr2R 7271900 intergenic Br140 - chr2R 7273969 exon Br140 - chr2R_12_7270001 chr2R_7270001 RAL-153 165 chr2R 7434901 7434918 chr2R 7439201 7439218 Juan 7 4300 6.0 5.0 5.5 1.1 4317 chr2R 7434901 intergenic so + chr2R 7437060 intergenic not near genes chr2R 7439218 intergenic not near genes chr2R_7_7435001 chr2R_7435001 RAL-153 166 chr2R 7553081 7553109 chr2R 7553161 7553189 8 80 1.5 0.5 1.0 4.0 108 chr2R 7553081 intron Corin + chr2R 7553135 intron Corin + chr2R 7553189 intron Corin + chr2R_8_7550001 chr2R_7550001 RAL-153 167 chr2R 7815676 7815699 chr2R 7822145 7822167 Burdock 4 6469 3.0 3.5 3.2 1.0 6491 chr2R 7815676 intergenic CG1882 + chr2R 7818922 intergenic not near genes chr2R 7822167 3` UTR cathD - chr2R_4_7815001 chr2R_7815001 RAL-153 168 chr2R 8015663 8015682 chr2R 8017668 8017704 4 2018 1.5 2.5 2.0 1.3 2041 chr2R 8015663 intergenic mir-4981 + chr2R 8016684 intergenic not near genes chr2R 8017704 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-153 169 chr2R 8089259 8089276 chr2R 8089344 8089362 5 86 3.0 3.0 3.0 1.2 103 chr2R 8089259 3` UTR sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089362 intergenic sut2 +,sut3 + chr2R_5_8085001 chr2R_8085001 RAL-153 170 chr2R 8330864 8330892 chr2R 8331350 8331378 roo 5 485 1.0 0.0 0.5 3.3 514 chr2R 8330864 intron pdm3 + chr2R 8331121 intron pdm3 + chr2R 8331378 intron pdm3 + chr2R_5_8330001 chr2R_8330001 RAL-153 171 chr2R 8338646 8338668 chr2R 8338726 8338747 4 80 1.0 2.0 1.5 1.6 101 chr2R 8338646 intron pdm3 + chr2R 8338696 intron pdm3 + chr2R 8338747 intron pdm3 + chr2R_4_8335001 chr2R_8335001 RAL-153 172 chr2R 8398217 8398233 chr2R 8402997 8403012 Doc 5 4779 6.5 4.5 5.5 0.8 4795 chr2R 8398217 intron CG2121 - chr2R 8400614 intron CG2121 - chr2R 8403012 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-153 173 chr2R 8403440 8403453 chr2R 8403523 8403535 6 83 3.0 3.5 3.2 1.4 95 chr2R 8403440 intron CG2121 - chr2R 8403488 intron CG2121 - chr2R 8403535 intron CG2121 - chr2R_6_8400001 chr2R_8400001 RAL-153 174 chr2R 8406087 8406104 chr2R 8406164 8406174 7 75 2.0 1.5 1.8 2.5 87 chr2R 8406087 intron CG2121 - chr2R 8406130 intron CG2121 - chr2R 8406174 intron CG2121 - chr2R_7_8405001 chr2R_8405001 RAL-153 175 chr2R 8415714 8415732 chr2R 8415808 8415831 5 92 1.0 1.0 1.0 2.5 117 chr2R 8415714 intergenic not near genes chr2R 8415772 intergenic not near genes chr2R 8415831 intergenic not near genes chr2R_5_8415001 chr2R_8415001 RAL-153 176 chr2R 8518800 8518804 chr2R 12066268 12066273 5 3547468 3.5 0.0 1.8 1.8 3547473 chr2R 8518800 intron mtt - chr2R 10292536 intron CAP + chr2R 12066273 intron CG8888 - chr2R_5_10290001 chr2R_10290001 RAL-153 177 chr2R 8524074 8524101 chr2R 8524147 8524181 7 78 1.0 1.5 1.2 3.2 107 chr2R 8524074 intron mtt - chr2R 8524128 intron mtt - chr2R 8524181 intron mtt - chr2R_7_8520001 chr2R_8520001 RAL-153 178 chr2R 8603146 8603165 chr2R 8603330 8603340 4 185 1.0 1.5 1.2 1.8 194 chr2R 8603146 intron rgr + chr2R 8603243 intron rgr + chr2R 8603340 intron rgr + chr2R_4_8600001 chr2R_8600001 RAL-153 179 chr2R 8714712 8714719 chr2R 8714788 8714805 4 82 0.0 4.5 2.2 1.2 93 chr2R 8714712 3` UTR PGRP-SC1b + chr2R 8714758 3` UTR PGRP-SC1b + chr2R 8714805 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-153 180 chr2R 8864865 8864874 chr2R 8865097 8865097 4 228 3.5 1.5 2.5 1.1 232 chr2R 8864865 intron RyR + chr2R 8864981 intron RyR + chr2R 8865097 intron RyR + chr2R_4_8860001 chr2R_8860001 RAL-153 181 chr2R 8864880 8864887 chr2R 8865089 8865118 4 217 2.0 1.0 1.5 1.6 238 chr2R 8864880 intron RyR + chr2R 8864999 intron RyR + chr2R 8865118 intron RyR + chr2R_4_8860001 chr2R_8860001 RAL-153 182 chr2R 9052717 9052739 chr2R 9052797 9052819 5 79 0.0 4.5 2.2 1.6 102 chr2R 9052717 intron CG13743 - chr2R 9052768 intron CG13743 - chr2R 9052819 intron CG13743 - chr2R_5_9050001 chr2R_9050001 RAL-153 183 chr2R 9075906 9075935 chr2R 9076036 9076070 14 133 4.0 5.0 4.5 2.5 164 chr2R 9075906 exon ana + chr2R 9075988 intron ana + chr2R 9076070 intron ana + chr2R_14_9075001 chr2R_9075001 RAL-153 184 chr2R 9151326 9151331 chr2R 9157778 9157801 Burdock 4 6465 2.0 2.0 2.0 1.3 6475 chr2R 9151326 3` UTR CG30345 + chr2R 9154564 intergenic not near genes chr2R 9157801 intergenic CG8008 - chr2R_4_9150001 chr2R_9150001 RAL-153 185 chr2R 9212694 9212723 chr2R 9213180 9213208 roo 4 486 1.5 6.0 3.8 0.8 514 chr2R 9212694 intergenic CR45309 + chr2R 9212951 intergenic CR45309 + chr2R 9213208 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-153 186 chr2R 9230224 9230240 chr2R 9230303 9230314 9 78 5.5 5.5 5.5 1.4 90 chr2R 9230224 intron hig - chr2R 9230269 intron hig - chr2R 9230314 exon hig - chr2R_9_9230001 chr2R_9230001 RAL-153 187 chr2R 9368125 9368155 chr2R 9368201 9368226 14 70 2.5 0.5 1.5 5.6 101 chr2R 9368125 intron CG13954 - chr2R 9368176 intron CG13954 - chr2R 9368226 intron CG13954 - chr2R_14_9365001 chr2R_9365001 RAL-153 188 chr2R 9561831 9561846 chr2R 9561919 9561934 4 88 0.0 0.5 0.2 3.3 103 chr2R 9561831 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561934 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 RAL-153 189 chr2R 10132206 10132222 chr2R 10132285 10132301 5 79 3.0 5.5 4.2 1.0 95 chr2R 10132206 intron gem + chr2R 10132254 intron gem + chr2R 10132301 intron gem + chr2R_5_10130001 chr2R_10130001 RAL-153 190 chr2R 10266438 10266455 chr2R 10266516 10266524 4 76 3.5 0.5 2.0 1.3 86 chr2R 10266438 intron CG12910 + chr2R 10266481 intron CG12910 + chr2R 10266524 intron CG12910 + chr2R_4_10265001 chr2R_10265001 RAL-153 191 chr2R 10266457 10266529 chr2R 10266511 10266610 5 76 0.5 0.5 0.5 3.3 153 chr2R 10266457 intron CG12910 + chr2R 10266534 intron CG12910 + chr2R 10266610 intron CG12910 + chr2R_5_10265001 chr2R_10265001 RAL-153 192 chr2R 10290115 10290142 chr2R 10290195 10290223 11 78 0.5 1.0 0.8 6.1 108 chr2R 10290115 intron CAP + chr2R 10290169 intron CAP + chr2R 10290223 intron CAP + chr2R_11_10290001 chr2R_10290001 RAL-153 193 chr2R 10352673 10352699 chr2R 10352748 10352776 10 75 5.0 4.0 4.5 1.8 103 chr2R 10352673 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352724 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352776 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_10_10350001 chr2R_10350001 RAL-153 194 chr2R 10387986 10387999 chr2R 10388076 10388079 5 92 0.0 5.0 2.5 1.4 93 chr2R 10387986 intron CG42732 - chr2R 10388032 intron CG42732 - chr2R 10388079 intron CG42732 - chr2R_5_10385001 chr2R_10385001 RAL-153 195 chr2R 10476467 10476475 chr2R 10476544 10476555 4 78 4.0 1.0 2.5 1.1 88 chr2R 10476467 intron whd - chr2R 10476511 intron whd - chr2R 10476555 intron whd - chr2R_4_10475001 chr2R_10475001 RAL-153 196 chr2R 10758797 10758823 chr2R 10758895 10758922 7 97 1.0 2.5 1.8 2.5 125 chr2R 10758797 intron CG33144 - chr2R 10758860 intron CG33144 - chr2R 10758922 intron CG33144 - chr2R_7_10755001 chr2R_10755001 RAL-153 197 chr2R 10834239 10834265 chr2R 10834717 10834737 8 474 14.0 13.5 13.8 0.5 498 chr2R 10834239 intron CG12344 - chr2R 10834488 intron CG12344 - chr2R 10834737 intron CG12344 - chr2R_8_10830001 chr2R_10830001 RAL-153 198 chr2R 10937816 10937832 chr2R 10937943 10937969 9 133 0.5 4.0 2.2 2.8 153 chr2R 10937816 intergenic not near genes chr2R 10937892 intergenic not near genes chr2R 10937969 intergenic Spn47C - chr2R_9_10935001 chr2R_10935001 RAL-153 199 chr2R 11009815 11009848 chr2R 11018989 11019016 roo 6 9171 1.0 0.5 0.8 3.3 9201 chr2R 11009815 intron luna - chr2R 11014416 intron luna - chr2R 11019016 intron luna - chr2R_6_11010001 chr2R_11010001 RAL-153 200 chr2R 11265726 11265743 chr2R 11265807 11265824 4 81 4.5 0.0 2.2 1.2 98 chr2R 11265726 exon Cpr47Ee + chr2R 11265775 intron Cpr47Ee + chr2R 11265824 intron Cpr47Ee + chr2R_4_11265001 chr2R_11265001 RAL-153 201 chr2R 11377262 11377270 chr2R 11377341 11377348 4 78 2.0 0.0 1.0 2.0 86 chr2R 11377262 3` UTR Tsp47F - chr2R 11377305 3` UTR Tsp47F - chr2R 11377348 3` UTR Tsp47F - chr2R_4_11375001 chr2R_11375001 RAL-153 202 chr2R 11439196 11439221 chr2R 11439271 11439296 4 70 0.5 2.5 1.5 1.6 100 chr2R 11439196 intron CG7777 + chr2R 11439246 intron CG7777 + chr2R 11439296 intron CG7777 + chr2R_4_11435001 chr2R_11435001 RAL-153 203 chr2R 11641857 11641880 chr2R 11641949 11641973 6 92 1.5 0.5 1.0 3.0 116 chr2R 11641857 3` UTR CG9003 - chr2R 11641915 3` UTR CG9003 - chr2R 11641973 3` UTR CG9003 - chr2R_6_11640001 chr2R_11640001 RAL-153 204 chr2R 11861992 11862019 chr2R 11862076 11862102 12 84 2.5 2.5 2.5 3.4 110 chr2R 11861992 3` UTR CG34230 + chr2R 11862047 intergenic CG34230 +,TwdlBeta - chr2R 11862102 intergenic CG34230 +,TwdlBeta - chr2R_12_11860001 chr2R_11860001 RAL-153 205 chr2R 8518782 8518782 chr2R 12066176 12066196 9 3547397 5.0 16.0 10.5 0.8 3547414 chr2R 8518782 intron mtt - chr2R 10292489 intron CAP + chr2R 12066196 intron CG8888 - chr2R_9_10290001 chr2R_10290001 RAL-153 206 chr2R 12110233 12110251 chr2R 12110324 12110342 4 90 0.0 1.0 0.5 2.7 109 chr2R 12110233 intron jeb - chr2R 12110288 intron jeb - chr2R 12110342 intron jeb - chr2R_4_12110001 chr2R_12110001 RAL-153 207 chr2R 12186000 12186025 chr2R 12186095 12186118 4 94 1.0 1.0 1.0 2.0 118 chr2R 12186000 intron Cyp6g1 + chr2R 12186059 intron Cyp6g1 + chr2R 12186118 intron Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-153 208 chr2R 12187472 12187507 chr2R 12190088 12190124 32 2622 79.0 56.5 67.8 0.5 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_32_12185001 chr2R_12185001 RAL-153 209 chr2R 12377502 12377525 chr2R 12377615 12377616 13 118 6.5 3.5 5.0 2.2 114 chr2R 12377502 intergenic Cpr49Aa + chr2R 12377559 intergenic Cpr49Aa + chr2R 12377616 intergenic Cpr49Aa + chr2R_13_12375001 chr2R_12375001 RAL-153 210 chr2R 12481156 12481170 chr2R 12482939 12482947 roo 8 1790 8.0 4.0 6.0 1.1 1791 chr2R 12481156 exon Dh44-R2 + chr2R 12482052 intron Dh44-R2 + chr2R 12482947 intron Dh44-R2 + chr2R_8_12480001 chr2R_12480001 RAL-153 211 chr2R 12501694 12501728 chr2R 12503855 12503869 Rt1c 6 2156 1.5 5.5 3.5 1.3 2175 chr2R 12501694 intron fdl - chr2R 12502782 intron fdl - chr2R 12503869 intron fdl - chr2R_6_12500001 chr2R_12500001 RAL-153 212 chr2R 12527992 12528014 chr2R 13699975 13700001 8 1171984 6.0 1.5 3.8 1.7 1172009 chr2R 12527992 intergenic not near genes chr2R 13113996 intron CG13325 + chr2R 13700001 intron fas + chr2R_8_13110001 chr2R_13110001 RAL-153 213 chr2R 12892347 12892366 chr2R 12892420 12892440 6 74 3.5 4.5 4.0 1.2 93 chr2R 12892347 intron vg + chr2R 12892394 intron vg + chr2R 12892440 intron vg + chr2R_6_12890001 chr2R_12890001 RAL-153 214 chr2R 13136837 13136855 chr2R 13141635 13141649 Doc 7 4797 6.0 3.0 4.5 1.3 4812 chr2R 13136837 exon Cap-G + chr2R 13139243 intron Cap-G + chr2R 13141649 intron Cap-G + chr2R_7_13135001 chr2R_13135001 RAL-153 215 chr2R 13267046 13267075 chr2R 13267145 13267174 8 98 3.5 1.0 2.2 2.5 128 chr2R 13267046 intergenic not near genes chr2R 13267110 intergenic not near genes chr2R 13267174 intergenic not near genes chr2R_8_13265001 chr2R_13265001 RAL-153 216 chr2R 13540388 13540420 chr2R 13540638 13540670 4 250 0.0 1.0 0.5 2.7 282 chr2R 13540388 intron CG6145 - chr2R 13540529 intron CG6145 - chr2R 13540670 intron CG6145 - chr2R_4_13540001 chr2R_13540001 RAL-153 217 chr2R 13694626 13694658 chr2R 13694703 13694734 5 76 0.0 0.0 0.0 5.0 108 chr2R 13694626 intron fas + chr2R 13694680 intron fas + chr2R 13694734 intron fas + chr2R_5_13690001 chr2R_13690001 RAL-153 218 chr2R 13771416 13771446 chr2R 13771490 13771521 4 68 0.5 0.0 0.2 3.3 105 chr2R 13771416 intron Cpr50Ca + chr2R 13771468 intron Cpr50Ca + chr2R 13771521 intron Cpr50Ca + chr2R_4_13770001 chr2R_13770001 RAL-153 219 chr2R 13852581 13852588 chr2R 13852858 13852868 6 278 25.0 14.5 19.8 0.3 287 chr2R 13852581 exon CG30485 + chr2R 13852724 exon CG30485 + chr2R 13852868 3` UTR CG30485 + chr2R_6_13850001 chr2R_13850001 RAL-153 220 chr2R 13852576 13852603 chr2R 13852875 13852882 4 286 26.5 18.0 22.2 0.2 306 chr2R 13852576 exon CG30485 + chr2R 13852729 exon CG30485 + chr2R 13852882 3` UTR CG30485 + chr2R_4_13850001 chr2R_13850001 RAL-153 221 chr2R 13905607 13905631 chr2R 13907589 13907612 Rt1a 5 1980 2.5 2.0 2.2 1.6 2005 chr2R 13905607 intron shot - chr2R 13906610 intron shot - chr2R 13907612 intron shot - chr2R_5_13905001 chr2R_13905001 RAL-153 222 chr2R 13905632 13905637 chr2R 13907587 13907598 Rt1a 5 1962 2.5 1.5 2.0 1.7 1966 chr2R 13905632 intron shot - chr2R 13906615 intron shot - chr2R 13907598 intron shot - chr2R_5_13905001 chr2R_13905001 RAL-153 223 chr2R 13951071 13951077 chr2R 13951149 13951155 5 77 2.5 0.5 1.5 2.0 84 chr2R 13951071 intron AGO1 - chr2R 13951113 intron AGO1 - chr2R 13951155 intron AGO1 - chr2R_5_13950001 chr2R_13950001 RAL-153 224 chr2R 14018157 14018186 chr2R 14018241 14018270 5 83 0.0 1.5 0.8 2.8 113 chr2R 14018157 intron mam + chr2R 14018214 intron mam + chr2R 14018270 intron mam + chr2R_5_14015001 chr2R_14015001 RAL-153 225 chr2R 14093434 14093443 chr2R 14109585 14109593 4 16151 4.5 0.5 2.5 1.1 16159 chr2R 14093434 intron Prosap - chr2R 14101514 intron Prosap - chr2R 14109593 intron Prosap - chr2R_4_14100001 chr2R_14100001 RAL-153 226 chr2R 14357558 14357572 chr2R 14357648 14357661 6 89 3.0 2.0 2.5 1.7 103 chr2R 14357558 intergenic CG8617 -,Arc1 - chr2R 14357610 intergenic Arc1 -,CG8617 - chr2R 14357661 intergenic Arc1 -,CG8617 - chr2R_6_14355001 chr2R_14355001 RAL-153 227 chr2R 14634289 14634307 chr2R 14634377 14634395 5 88 2.0 1.5 1.8 1.8 106 chr2R 14634289 intergenic not near genes chr2R 14634342 intergenic not near genes chr2R 14634395 intergenic not near genes chr2R_5_14630001 chr2R_14630001 RAL-153 228 chr2R 14777801 14777830 chr2R 14777880 14777908 7 73 2.0 2.0 2.0 2.3 107 chr2R 14777801 intron kn - chr2R 14777854 intron kn - chr2R 14777908 intron kn - chr2R_7_14775001 chr2R_14775001 RAL-153 229 chr2R 14855030 14855063 chr2R 14855122 14855153 10 89 2.5 0.0 1.2 4.5 123 chr2R 14855030 5` UTR Ciao1 - chr2R 14855092 intergenic Ciao1 -,HPS1 + chr2R 14855153 intergenic Ciao1 -,HPS1 + chr2R_10_14855001 chr2R_14855001 RAL-153 230 chr2R 14911703 14911728 chr2R 14911825 14911849 9 122 2.0 1.0 1.5 3.6 146 chr2R 14911703 intron CG10249 - chr2R 14911776 intron CG10249 - chr2R 14911849 intron CG10249 - chr2R_9_14910001 chr2R_14910001 RAL-153 231 chr2R 15065624 15065643 chr2R 15065696 15065720 4 75 2.0 1.5 1.8 1.4 96 chr2R 15065624 intergenic not near genes chr2R 15065672 intergenic not near genes chr2R 15065720 intergenic not near genes chr2R_4_15065001 chr2R_15065001 RAL-153 232 chr2R 15133427 15133459 chr2R 15133518 15133568 8 112 1.0 0.0 0.5 5.3 141 chr2R 15133427 intron chn + chr2R 15133498 intron chn + chr2R 15133568 intron chn + chr2R_8_15130001 chr2R_15130001 RAL-153 233 chr2R 15137968 15138000 chr2R 15138048 15138080 5 79 4.0 0.5 2.2 1.6 112 chr2R 15137968 intron chn + chr2R 15138024 intron chn + chr2R 15138080 intron chn + chr2R_5_15135001 chr2R_15135001 RAL-153 234 chr2R 15359308 15359322 chr2R 15359402 15359416 8 92 1.5 5.0 3.2 1.9 108 chr2R 15359308 intron unc-5 + chr2R 15359362 intron unc-5 + chr2R 15359416 intron unc-5 + chr2R_8_15355001 chr2R_15355001 RAL-153 235 chr2R 15478515 15478531 chr2R 15478586 15478611 7 78 4.0 4.0 4.0 1.4 96 chr2R 15478515 intron CG8180 - chr2R 15478563 intron CG8180 - chr2R 15478611 intron CG8180 - chr2R_7_15475001 chr2R_15475001 RAL-153 236 chr2R 15685363 15685383 chr2R 15685466 15685486 5 101 4.5 2.0 3.2 1.2 123 chr2R 15685363 intron,exon Ranbp11 +,CG30082 - chr2R 15685424 intron,intron Ranbp11 +,CG30082 - chr2R 15685486 intron,intron Ranbp11 +,CG30082 - chr2R_5_15685001 chr2R_15685001 RAL-153 237 chr2R 15902880 15902910 chr2R 15902954 15902967 6 72 4.0 4.5 4.2 1.2 87 chr2R 15902880 intron sli - chr2R 15902924 intron sli - chr2R 15902967 intron sli - chr2R_6_15900001 chr2R_15900001 RAL-153 238 chr2R 16001078 16001100 chr2R 16001157 16001160 8 77 5.0 2.0 3.5 1.8 82 chr2R 16001078 intron ATPCL - chr2R 16001119 intron ATPCL - chr2R 16001160 intron ATPCL - chr2R_8_16000001 chr2R_16000001 RAL-153 239 chr2R 16245631 16245661 chr2R 16245719 16245741 6 84 2.0 3.5 2.8 1.6 110 chr2R 16245631 intron CngA - chr2R 16245686 intron CngA - chr2R 16245741 intron CngA - chr2R_6_16245001 chr2R_16245001 RAL-153 240 chr2R 16571870 16571897 chr2R 16571965 16571992 9 94 2.0 0.0 1.0 4.5 122 chr2R 16571870 intergenic CG4927 + chr2R 16571931 intergenic CG4927 + chr2R 16571992 intergenic CG4927 + chr2R_9_16570001 chr2R_16570001 RAL-153 241 chr2R 16617059 16617090 chr2R 16617138 16617169 15 78 4.0 2.5 3.2 3.6 110 chr2R 16617059 intron CG5065 + chr2R 16617114 intron CG5065 + chr2R 16617169 intron CG5065 + chr2R_15_16615001 chr2R_16615001 RAL-153 242 chr2R 16784451 16784483 chr2R 16784539 16784570 7 84 1.5 0.5 1.0 3.5 119 chr2R 16784451 intron CG5522 + chr2R 16784510 intron CG5522 + chr2R 16784570 intron CG5522 + chr2R_7_16780001 chr2R_16780001 RAL-153 243 chr2R 16893778 16893799 chr2R 16893861 16893882 7 80 4.5 3.0 3.8 1.5 104 chr2R 16893778 intron CG8910 - chr2R 16893830 intron CG8910 - chr2R 16893882 intron CG8910 - chr2R_7_16890001 chr2R_16890001 RAL-153 244 chr2R 17086997 17087018 chr2R 17087078 17087080 4 72 2.0 0.0 1.0 2.0 83 chr2R 17086997 intron CG30460 - chr2R 17087038 intron CG30460 - chr2R 17087080 intron CG30460 - chr2R_4_17085001 chr2R_17085001 RAL-153 245 chr2R 17147247 17147268 chr2R 17152278 17152299 jockey 5 5031 2.0 0.5 1.2 2.3 5052 chr2R 17147247 intergenic not near genes chr2R 17149773 intergenic not near genes chr2R 17152299 intergenic not near genes chr2R_5_17145001 chr2R_17145001 RAL-153 246 chr2R 17459006 17459036 chr2R 17459090 17459120 4 84 1.0 1.5 1.2 1.8 114 chr2R 17459006 intron CG14478 + chr2R 17459063 intron CG14478 + chr2R 17459120 intron CG14478 + chr2R_4_17455001 chr2R_17455001 RAL-153 247 chr2R 17461291 17461318 chr2R 17461449 17461476 9 155 1.5 3.5 2.5 2.6 185 chr2R 17461291 intron CG14478 + chr2R 17461384 intron CG14478 + chr2R 17461476 intron CG14478 + chr2R_9_17460001 chr2R_17460001 RAL-153 248 chr2R 17529369 17529398 chr2R 17529725 17529755 12 356 5.0 3.5 4.2 2.3 386 chr2R 17529369 intron Patronin - chr2R 17529562 intron Patronin - chr2R 17529755 intron Patronin - chr2R_12_17525001 chr2R_17525001 RAL-153 249 chr2R 17846775 17846813 chr2R 17846859 17846897 16 80 2.0 4.0 3.0 4.0 122 chr2R 17846775 intron,5` UTR olf186-F +,olf186-M + chr2R 17846836 intron,5` UTR olf186-F +,olf186-M + chr2R 17846897 intron,5` UTR olf186-F +,olf186-M + chr2R_16_17845001 chr2R_17845001 RAL-153 250 chr2R 17929126 17929149 chr2R 17929219 17929242 6 92 1.5 3.0 2.2 1.9 116 chr2R 17929126 intergenic not near genes chr2R 17929184 intergenic not near genes chr2R 17929242 intergenic not near genes chr2R_6_17925001 chr2R_17925001 RAL-153 251 chr2R 18045675 18045697 chr2R 18046026 18046049 jockey 5 352 1.5 1.5 1.5 2.0 374 chr2R 18045675 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046049 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 RAL-153 252 chr2R 18124339 18124375 chr2R 18124415 18124452 13 76 4.5 5.5 5.0 2.2 113 chr2R 18124339 intron stau - chr2R 18124396 intron stau - chr2R 18124452 intron stau - chr2R_13_18120001 chr2R_18120001 RAL-153 253 chr2R 18486844 18486874 chr2R 18487106 18487124 7 260 1.5 1.5 1.5 2.8 280 chr2R 18486844 intron CG30116 - chr2R 18486984 intron CG30116 - chr2R 18487124 intron CG30116 - chr2R_7_18485001 chr2R_18485001 RAL-153 254 chr2R 18590882 18590897 chr2R 18600034 18600049 roo 4 9151 2.0 2.0 2.0 1.3 9167 chr2R 18590882 intron GEFmeso - chr2R 18595466 intron GEFmeso - chr2R 18600049 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-153 255 chr2R 18871654 18871678 chr2R 18871739 18871762 5 84 3.5 0.0 1.8 1.8 108 chr2R 18871654 intergenic not near genes chr2R 18871708 intergenic not near genes chr2R 18871762 intergenic not near genes chr2R_5_18870001 chr2R_18870001 RAL-153 256 chr2R 19015451 19015460 chr2R 19015520 19015546 5 77 1.0 0.5 0.8 2.8 95 chr2R 19015451 intergenic not near genes chr2R 19015498 intergenic not near genes chr2R 19015546 intergenic not near genes chr2R_5_19015001 chr2R_19015001 RAL-153 257 chr2R 19025308 19025333 chr2R 19025542 19025567 6 232 1.5 3.5 2.5 1.7 259 chr2R 19025308 intron 5-HT1B - chr2R 19025438 intron 5-HT1B - chr2R 19025567 intron 5-HT1B - chr2R_6_19025001 chr2R_19025001 RAL-153 258 chr2R 19776599 19776621 chr2R 19779921 19779944 jockey 5 3322 1.0 4.0 2.5 1.4 3345 chr2R 19776599 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779944 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-153 259 chr2R 20057027 20057042 chr2R 20057102 20057124 5 83 0.5 1.5 1.0 2.5 97 chr2R 20057027 intergenic not near genes chr2R 20057076 intergenic not near genes chr2R 20057124 intergenic not near genes chr2R_5_20055001 chr2R_20055001 RAL-153 260 chr2R 20069255 20069275 chr2R 20071884 20071900 opus 4 2628 1.5 1.0 1.2 1.8 2645 chr2R 20069255 intergenic not near genes chr2R 20070578 intergenic not near genes chr2R 20071900 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-153 261 chr2R 20483921 20483934 chr2R 20484293 20484306 4 372 0.5 0.0 0.2 3.3 385 chr2R 20483921 intergenic not near genes chr2R 20484114 intergenic not near genes chr2R 20484306 intergenic not near genes chr2R_4_20480001 chr2R_20480001 RAL-153 262 chr2R 20511329 20511334 chr2R 20511397 20511420 4 73 3.5 1.5 2.5 1.1 91 chr2R 20511329 5` UTR CR44648 + chr2R 20511374 5` UTR CR44648 + chr2R 20511420 5` UTR CR44648 + chr2R_4_20510001 chr2R_20510001 RAL-153 263 chr2R 20833030 20833058 chr2R 20833113 20833141 7 79 0.5 3.5 2.0 2.3 111 chr2R 20833030 intron,intron insc -,sktl - chr2R 20833086 intron,intron insc -,sktl - chr2R 20833141 intron,intron insc -,sktl - chr2R_7_20830001 chr2R_20830001 RAL-153 264 chr2R 20916445 20916454 chr2R 20916576 20916589 5 134 7.5 3.0 5.2 0.8 144 chr2R 20916445 intergenic Rx + chr2R 20916517 intergenic Rx + chr2R 20916589 intergenic Rx + chr2R_5_20915001 chr2R_20915001 RAL-153 265 chr2R 20962907 20962939 chr2R 20963005 20963037 6 97 1.0 1.0 1.0 3.0 130 chr2R 20962907 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963037 intergenic not near genes chr2R_6_20960001 chr2R_20960001 RAL-153 266 chr2R 21073346 21073371 chr2R 21073425 21073450 4 80 3.0 1.0 2.0 1.3 104 chr2R 21073346 intergenic not near genes chr2R 21073398 intergenic not near genes chr2R 21073450 intergenic not near genes chr2R_4_21070001 chr2R_21070001 RAL-153 267 chr2R 21322939 21322955 chr2R 21323023 21323039 7 83 9.0 2.5 5.8 1.0 100 chr2R 21322939 5` UTR CG30394 - chr2R 21322989 5` UTR CG30394 - chr2R 21323039 5` UTR CG30394 - chr2R_7_21320001 chr2R_21320001 RAL-153 268 chr2R 21457026 21457034 chr2R 21457094 21457124 4 84 0.0 1.0 0.5 2.7 98 chr2R 21457026 intron Sdc - chr2R 21457075 intron Sdc - chr2R 21457124 intron Sdc - chr2R_4_21455001 chr2R_21455001 RAL-153 269 chr2R 21648729 21648749 chr2R 21648951 21648967 6 217 1.5 1.5 1.5 2.4 238 chr2R 21648729 intron CG10082 + chr2R 21648848 intron CG10082 + chr2R 21648967 intron CG10082 + chr2R_6_21645001 chr2R_21645001 RAL-153 270 chr2R 21944853 21944874 chr2R 21944928 21944938 8 78 3.5 2.5 3.0 2.0 85 chr2R 21944853 3` UTR Fili + chr2R 21944896 3` UTR Fili + chr2R 21944938 3` UTR Fili + chr2R_8_21940001 chr2R_21940001 RAL-153 271 chr2R 22349692 22349722 chr2R 22351473 22351485 jockey 8 1778 2.0 2.0 2.0 2.7 1793 chr2R 22349692 intron Liprin-gamma - chr2R 22350588 intron Liprin-gamma - chr2R 22351485 intron Liprin-gamma - chr2R_8_22350001 chr2R_22350001 RAL-153 272 chr2R 22481731 22481754 chr2R 22482157 22482164 4 423 3.5 3.5 3.5 0.9 433 chr2R 22481731 exon CG4752 + chr2R 22481948 exon CG4752 + chr2R 22482164 exon CG4752 + chr2R_4_22480001 chr2R_22480001 RAL-153 273 chr2R 22503877 22503897 chr2R 22503972 22503992 5 95 0.5 2.0 1.2 2.3 115 chr2R 22503877 intron px - chr2R 22503934 intron px - chr2R 22503992 intron px - chr2R_5_22500001 chr2R_22500001 RAL-153 274 chr2R 22525761 22525787 chr2R 22529319 22529341 jockey 5 3557 1.0 2.0 1.5 2.0 3580 chr2R 22525761 intron px - chr2R 22527551 intron px - chr2R 22529341 intron px - chr2R_5_22525001 chr2R_22525001 RAL-153 275 chr2R 22623474 22623485 chr2R 22623604 22623609 4 133 0.0 2.5 1.2 1.8 135 chr2R 22623474 intron CG33143 + chr2R 22623542 intron CG33143 + chr2R 22623609 intron CG33143 + chr2R_4_22620001 chr2R_22620001 RAL-153 276 chr2R 22662267 22662274 chr2R 22662368 22662375 6 100 5.5 3.5 4.5 1.1 108 chr2R 22662267 intron CG42566 + chr2R 22662321 intron CG42566 + chr2R 22662375 intron CG42566 + chr2R_6_22660001 chr2R_22660001 RAL-153 277 chr2R 22666591 22666626 chr2R 22666671 22666706 6 79 1.5 1.0 1.2 2.7 115 chr2R 22666591 3` UTR,intron CR45269 -,CR42868 + chr2R 22666648 5` UTR CR42868 + chr2R 22666706 5` UTR CR42868 + chr2R_6_22665001 chr2R_22665001 RAL-153 278 chr2R 22691752 22691772 chr2R 22691853 22691872 5 100 2.0 3.0 2.5 1.4 120 chr2R 22691752 5` UTR CR44764 + chr2R 22691812 5` UTR CR44764 + chr2R 22691872 5` UTR CR44764 + chr2R_5_22690001 chr2R_22690001 RAL-153 279 chr2R 22774965 22774997 chr2R 22775378 22775416 jockey 7 415 4.0 2.0 3.0 1.8 451 chr2R 22774965 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775416 intron CG42260 - chr2R_7_22775001 chr2R_22775001 RAL-153 280 chr2R 22909527 22909539 chr2R 22909762 22909775 5 233 3.0 1.5 2.2 1.6 248 chr2R 22909527 intron nahoda + chr2R 22909651 intron nahoda + chr2R 22909775 intron nahoda + chr2R_5_22905001 chr2R_22905001 RAL-153 281 chr2R 23175046 23175068 chr2R 23175122 23175125 5 72 2.5 5.5 4.0 1.0 79 chr2R 23175046 intron CG34371 - chr2R 23175086 intron CG34371 - chr2R 23175125 intron CG34371 - chr2R_5_23175001 chr2R_23175001 RAL-153 282 chr2R 23402615 23402638 chr2R 23407689 23407690 flea 5 5070 2.0 3.0 2.5 1.4 5075 chr2R 23402615 intergenic CG3520 - chr2R 23405152 intergenic not near genes chr2R 23407690 intergenic not near genes chr2R_5_23405001 chr2R_23405001 RAL-153 283 chr2R 23423742 23423762 chr2R 23423900 23423919 5 158 1.5 4.5 3.0 1.2 177 chr2R 23423742 intron CG9815 - chr2R 23423830 intron CG9815 - chr2R 23423919 intron CG9815 - chr2R_5_23420001 chr2R_23420001 RAL-153 284 chr2R 23429216 23429242 chr2R 23429438 23429444 5 212 1.0 1.0 1.0 2.5 228 chr2R 23429216 intron CG9815 - chr2R 23429330 intron CG9815 - chr2R 23429444 intron CG9815 - chr2R_5_23425001 chr2R_23425001 RAL-153 285 chr2R 23529589 23529607 chr2R 23537152 23537182 412 11 7567 4.5 6.5 5.5 1.7 7593 chr2R 23529589 intron bw - chr2R 23533386 intron bw - chr2R 23537182 exon bw - chr2R_11_23530001 chr2R_23530001 RAL-153 286 chr2R 23607044 23607192 chr2R 23607116 23607280 7 83 3.0 2.5 2.8 1.8 236 chr2R 23607044 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607280 intron CG17664 - chr2R_7_23605001 chr2R_23605001 RAL-153 287 chr2R 23674181 23674192 chr2R 23674261 23674272 7 79 4.5 3.0 3.8 1.5 91 chr2R 23674181 intron Pde8 + chr2R 23674226 intron Pde8 + chr2R 23674272 intron Pde8 + chr2R_7_23670001 chr2R_23670001 RAL-153 288 chr2R 23784482 23784506 chr2R 23784556 23784582 9 76 1.5 1.5 1.5 3.6 100 chr2R 23784482 intron CG9850 - chr2R 23784532 intron CG9850 - chr2R 23784582 intron CG9850 - chr2R_9_23780001 chr2R_23780001 RAL-153 289 chr2R 24031380 24031414 chr2R 24031464 24031480 13 80 5.0 2.0 3.5 2.9 100 chr2R 24031380 5` UTR CG30172 - chr2R 24031430 intergenic CG30172 -,Chi - chr2R 24031480 intergenic CG30172 -,Chi - chr2R_13_24030001 chr2R_24030001 RAL-153 290 chr2R 24147071 24147085 chr2R 24154648 24154650 412 4 7574 5.5 5.5 5.5 0.6 7579 chr2R 24147071 intron Dat + chr2R 24150860 intron Dat + chr2R 24154650 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-153 291 chr2R 24177237 24177259 chr2R 24184722 24184744 412 4 7485 4.0 3.0 3.5 0.9 7507 chr2R 24177237 3` UTR Nop60B + chr2R 24180990 intron Nop60B + chr2R 24184744 3` UTR Nop60B + chr2R_4_24180001 chr2R_24180001 RAL-153 292 chr2R 24303892 24303912 chr2R 24303972 24303995 8 81 2.5 0.0 1.2 3.6 103 chr2R 24303892 intergenic not near genes chr2R 24303944 intergenic not near genes chr2R 24303995 intergenic not near genes chr2R_8_24300001 chr2R_24300001 RAL-153 293 chr2R 24320184 24320203 chr2R 24320288 24320299 4 97 2.5 4.5 3.5 0.9 115 chr2R 24320184 intergenic not near genes chr2R 24320242 intergenic not near genes chr2R 24320299 intergenic not near genes chr2R_4_24320001 chr2R_24320001 RAL-153 294 chr2R 24352574 24352601 chr2R 24352651 24352678 6 69 4.0 3.5 3.8 1.2 104 chr2R 24352574 intron,intron bs +,CR44811 - chr2R 24352626 intron,intron bs +,CR44811 - chr2R 24352678 intron,intron bs +,CR44811 - chr2R_6_24350001 chr2R_24350001 RAL-153 295 chr2R 24353433 24353441 chr2R 24361794 24361803 roo 7 8361 4.0 4.5 4.2 1.3 8370 chr2R 24353433 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361803 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-153 296 chr2R 24353442 24353460 chr2R 24361791 24361819 roo 6 8358 3.0 4.5 3.8 1.2 8377 chr2R 24353442 intron,intron bs +,CR44811 - chr2R 24357630 intron,intron bs +,CR44811 - chr2R 24361819 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-153 297 chr2R 24509324 24509329 chr2R 24509391 24509413 4 76 3.0 1.0 2.0 1.3 89 chr2R 24509324 intergenic Letm1 - chr2R 24509368 intergenic Letm1 - chr2R 24509413 intergenic Letm1 - chr2R_4_24505001 chr2R_24505001 RAL-153 298 chr2R 24590112 24590144 chr2R 24590204 24590236 11 88 2.0 3.5 2.8 2.9 124 chr2R 24590112 intron pio + chr2R 24590174 intron pio + chr2R 24590236 intron pio + chr2R_11_24590001 chr2R_24590001 RAL-153 299 chr2R 24727889 24727915 chr2R 24735397 24735413 mdg1 9 7502 2.0 7.0 4.5 1.6 7524 chr2R 24727889 intron Mid1 - chr2R 24731651 intron Mid1 - chr2R 24735413 intron Mid1 - chr2R_9_24730001 chr2R_24730001 RAL-153 300 chr2R 24763611 24763642 chr2R 24765584 24765593 G2 17 1970 5.5 7.0 6.2 2.4 1982 chr2R 24763611 exon CG3894 + chr2R 24764602 intron CG3894 + chr2R 24765593 exon CG3894 + chr2R_17_24760001 chr2R_24760001 RAL-153 301 chr2R 24800460 24800472 chr2R 24800539 24800539 4 76 3.0 5.0 4.0 0.8 79 chr2R 24800460 3` UTR CG3611 + chr2R 24800500 3` UTR CG3611 + chr2R 24800539 3` UTR CG3611 + chr2R_4_24800001 chr2R_24800001 RAL-153 302 chr2R 24884050 24884076 chr2R 24884132 24884157 8 78 0.5 1.0 0.8 4.4 107 chr2R 24884050 intron NKAIN + chr2R 24884104 intron NKAIN + chr2R 24884157 intron NKAIN + chr2R_8_24880001 chr2R_24880001 RAL-153 303 chr2R 25014547 25014574 chr2R 25014622 25014649 6 72 1.5 1.0 1.2 2.7 102 chr2R 25014547 intron uzip + chr2R 25014598 intron uzip + chr2R 25014649 intron uzip + chr2R_6_25010001 chr2R_25010001 RAL-153 304 chr2R 25038370 25038380 chr2R 25038920 25038928 4 548 17.5 21.0 19.2 0.2 558 chr2R 25038370 intron Nplp1 + chr2R 25038649 intron Nplp1 + chr2R 25038928 intron Nplp1 + chr2R_4_25035001 chr2R_25035001 RAL-153 305 chr2R 25061333 25061358 chr2R 25061416 25061424 5 78 0.0 1.0 0.5 3.3 91 chr2R 25061333 intergenic not near genes chr2R 25061378 intergenic not near genes chr2R 25061424 intergenic not near genes chr2R_5_25060001 chr2R_25060001 RAL-153 306 chr2R 25101277 25101307 chr2R 25101376 25101409 9 101 2.5 5.5 4.0 1.8 132 chr2R 25101277 intron lov - chr2R 25101343 intron lov - chr2R 25101409 intron lov - chr2R_9_25100001 chr2R_25100001 RAL-153 307 chr3L 563970 564002 chr3L 564149 564177 4 175 0.0 1.5 0.8 2.2 207 chr3L 563970 intron hipk + chr3L 564074 intron hipk + chr3L 564177 intron hipk + chr3L_4_560001 chr3L_560001 RAL-153 308 chr3L 642483 642500 chr3L 642572 642576 4 86 1.0 3.0 2.0 1.3 93 chr3L 642483 5` UTR CR43334 + chr3L 642530 5` UTR CR43334 + chr3L 642576 5` UTR CR43334 + chr3L_4_640001 chr3L_640001 RAL-153 309 chr3L 651389 651422 chr3L 651476 651510 6 88 5.0 4.0 4.5 1.1 121 chr3L 651389 intergenic Gale +,CG3402 - chr3L 651450 intergenic CG3402 -,Gale + chr3L 651510 intergenic CG3402 -,Gale + chr3L_6_650001 chr3L_650001 RAL-153 310 chr3L 933911 933936 chr3L 934013 934037 5 102 1.5 2.5 2.0 1.7 126 chr3L 933911 intron Glut1 + chr3L 933974 intron Glut1 + chr3L 934037 intron Glut1 + chr3L_5_930001 chr3L_930001 RAL-153 311 chr3L 939774 939794 chr3L 940895 940914 jockey 6 1121 4.5 3.0 3.8 1.2 1140 chr3L 939774 intron Glut1 + chr3L 940344 intron Glut1 + chr3L 940914 intron Glut1 + chr3L_6_940001 chr3L_940001 RAL-153 312 chr3L 986643 986651 chr3L 986719 986724 4 74 6.0 4.0 5.0 0.7 81 chr3L 986643 intergenic not near genes chr3L 986684 intergenic not near genes chr3L 986724 intergenic not near genes chr3L_4_985001 chr3L_985001 RAL-153 313 chr3L 1003059 1003081 chr3L 1003135 1003157 10 76 4.0 4.5 4.2 1.9 98 chr3L 1003059 intron trio - chr3L 1003108 intron trio - chr3L 1003157 intron trio - chr3L_10_1000001 chr3L_1000001 RAL-153 314 chr3L 1040548 1040580 chr3L 1040632 1040652 8 80 2.5 2.5 2.5 2.3 104 chr3L 1040548 intron bab1 - chr3L 1040600 intron bab1 - chr3L 1040652 intron bab1 - chr3L_8_1040001 chr3L_1040001 RAL-153 315 chr3L 1219594 1219625 chr3L 1227327 1227358 412 12 7730 6.5 5.0 5.8 1.8 7764 chr3L 1219594 intron mwh + chr3L 1223476 intron mwh + chr3L 1227358 intron mwh + chr3L_12_1220001 chr3L_1220001 RAL-153 316 chr3L 1310999 1311010 chr3L 1315860 1315871 4 4862 23.5 16.0 19.8 0.2 4872 chr3L 1310999 exon CG2469 + chr3L 1313435 intergenic CG9186 -,CG9153 + chr3L 1315871 exon CG9153 + chr3L_4_1310001 chr3L_1310001 RAL-153 317 chr3L 1321565 1321590 chr3L 1321764 1321787 6 194 3.0 2.5 2.8 1.6 222 chr3L 1321565 intron Myo61F + chr3L 1321676 intron Myo61F + chr3L 1321787 intron Myo61F + chr3L_6_1320001 chr3L_1320001 RAL-153 318 chr3L 1347157 1347185 chr3L 1347241 1347270 10 81 3.5 3.0 3.2 2.4 113 chr3L 1347157 intron Ptp61F - chr3L 1347214 intron Ptp61F - chr3L 1347270 intron Ptp61F - chr3L_10_1345001 chr3L_1345001 RAL-153 319 chr3L 1378121 1378142 chr3L 1378199 1378220 5 77 0.0 4.0 2.0 1.7 99 chr3L 1378121 intron,intron Ptp61F -,ru + chr3L 1378170 intron,intron Ptp61F -,ru + chr3L 1378220 intron,intron Ptp61F -,ru + chr3L_5_1375001 chr3L_1375001 RAL-153 320 chr3L 1506008 1506018 chr3L 1513599 1513611 17.6 6 7594 1.0 0.0 0.5 4.0 7603 chr3L 1506008 intron,intron Psa +,cue - chr3L 1509810 intron,intron Psa +,cue - chr3L 1513611 intron,intron Psa +,cue - chr3L_6_1505001 chr3L_1505001 RAL-153 321 chr3L 1634517 1634550 chr3L 1634594 1634626 19 76 6.5 7.0 6.8 2.4 109 chr3L 1634517 intron nSyb - chr3L 1634572 intron nSyb - chr3L 1634626 intron nSyb - chr3L_19_1630001 chr3L_1630001 RAL-153 322 chr3L 2108256 2108284 chr3L 2113459 2113488 copia 6 5203 1.5 3.5 2.5 1.7 5232 chr3L 2108256 intron sls - chr3L 2110872 intron sls - chr3L 2113488 intron sls - chr3L_6_2110001 chr3L_2110001 RAL-153 323 chr3L 2139209 2139234 chr3L 2139290 2139315 7 80 1.5 4.0 2.8 1.8 106 chr3L 2139209 intron zormin - chr3L 2139262 intron zormin - chr3L 2139315 intron zormin - chr3L_7_2135001 chr3L_2135001 RAL-153 324 chr3L 2447518 2447531 chr3L 2456660 2456686 roo 4 9152 2.5 3.0 2.8 1.1 9168 chr3L 2447518 intron CG45186 + chr3L 2452102 intron CG45186 + chr3L 2456686 intron CG45186 + chr3L_4_2450001 chr3L_2450001 RAL-153 325 chr3L 2561531 2561560 chr3L 2561607 2561636 10 74 3.0 1.5 2.2 3.1 105 chr3L 2561531 intron msn - chr3L 2561584 intron msn - chr3L 2561636 intron msn - chr3L_10_2560001 chr3L_2560001 RAL-153 326 chr3L 2683944 2683979 chr3L 2684019 2684055 16 75 3.0 3.5 3.2 3.8 111 chr3L 2683944 intron Fife - chr3L 2684000 intron Fife - chr3L 2684055 intron Fife - chr3L_16_2680001 chr3L_2680001 RAL-153 327 chr3L 2719550 2719556 chr3L 2719642 2719656 4 99 4.0 1.5 2.8 1.1 106 chr3L 2719550 3` UTR Mrtf - chr3L 2719603 3` UTR Mrtf - chr3L 2719656 3` UTR Mrtf - chr3L_4_2715001 chr3L_2715001 RAL-153 328 chr3L 3057253 3057277 chr3L 3057396 3057420 5 142 2.5 2.0 2.2 1.6 167 chr3L 3057253 exon CG32486 - chr3L 3057336 intron CG32486 - chr3L 3057420 intron CG32486 - chr3L_5_3055001 chr3L_3055001 RAL-153 329 chr3L 3281456 3281471 chr3L 3281948 3281954 Doc 4 492 0.0 3.0 1.5 1.6 498 chr3L 3281456 intron CG12017 + chr3L 3281705 intron CG12017 + chr3L 3281954 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-153 330 chr3L 3314136 3314170 chr3L 3314269 3314274 27 130 10.0 8.0 9.0 2.7 138 chr3L 3314136 intergenic ZnT63C +,Drsl2 + chr3L 3314205 intergenic Drsl2 +,ZnT63C + chr3L 3314274 intergenic Drsl2 +,ZnT63C + chr3L_27_3310001 chr3L_3310001 RAL-153 331 chr3L 3312267 3312286 chr3L 3315551 3315582 10 3286 28.0 19.0 23.5 0.4 3315 chr3L 3312267 exon ZnT63C + chr3L 3313924 3` UTR ZnT63C + chr3L 3315582 intergenic Drsl4 +,Drsl3 + chr3L_10_3310001 chr3L_3310001 RAL-153 332 chr3L 3487211 3487222 chr3L 3487287 3487314 4 88 1.5 1.0 1.2 1.8 103 chr3L 3487211 intron CG42324 + chr3L 3487262 intron CG42324 + chr3L 3487314 intron CG42324 + chr3L_4_3485001 chr3L_3485001 RAL-153 333 chr3L 3766739 3766755 chr3L 3766824 3766840 4 85 4.0 0.5 2.2 1.2 101 chr3L 3766739 intron CG32264 - chr3L 3766790 intron CG32264 - chr3L 3766840 intron CG32264 - chr3L_4_3765001 chr3L_3765001 RAL-153 334 chr3L 3797250 3797258 chr3L 3797332 3797341 8 82 0.5 2.5 1.5 3.2 91 chr3L 3797250 intron CG32264 - chr3L 3797296 intron CG32264 - chr3L 3797341 intron CG32264 - chr3L_8_3795001 chr3L_3795001 RAL-153 335 chr3L 3890963 3890989 chr3L 3891043 3891070 5 79 3.0 0.5 1.8 1.8 107 chr3L 3890963 intergenic not near genes chr3L 3891016 intergenic not near genes chr3L 3891070 intergenic not near genes chr3L_5_3890001 chr3L_3890001 RAL-153 336 chr3L 4230570 4230592 chr3L 4230655 4230680 5 83 1.0 3.5 2.2 1.6 110 chr3L 4230570 intron ImpL2 - chr3L 4230625 intron ImpL2 - chr3L 4230680 intron ImpL2 - chr3L_5_4230001 chr3L_4230001 RAL-153 337 chr3L 4341330 4341335 chr3L 21448026 21448027 5 17106693 2.0 10.5 6.2 0.7 17106697 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_5_12890001 chr3L_12890001 RAL-153 338 chr3L 4494969 4495001 chr3L 4495057 4495089 4 86 0.0 1.0 0.5 2.7 120 chr3L 4494969 intergenic CR44709 - chr3L 4495029 intergenic CR44709 - chr3L 4495089 intergenic CR44709 - chr3L_4_4495001 chr3L_4495001 RAL-153 339 chr3L 4580311 4580336 chr3L 4580392 4580414 5 81 0.5 1.0 0.8 2.8 103 chr3L 4580311 intron CG42540 + chr3L 4580362 intron CG42540 + chr3L 4580414 intron CG42540 + chr3L_5_4580001 chr3L_4580001 RAL-153 340 chr3L 4657973 4657996 chr3L 4658433 4658458 5 462 0.0 2.5 1.2 2.3 485 chr3L 4657973 intron axo - chr3L 4658216 intron axo - chr3L 4658458 intron axo - chr3L_5_4655001 chr3L_4655001 RAL-153 341 chr3L 4858308 4858335 chr3L 4858397 4858418 5 88 4.0 3.0 3.5 1.1 110 chr3L 4858308 intergenic not near genes chr3L 4858363 intergenic not near genes chr3L 4858418 intergenic not near genes chr3L_5_4855001 chr3L_4855001 RAL-153 342 chr3L 4901137 4901156 chr3L 4907327 4907346 diver 4 6190 3.0 1.5 2.2 1.2 6209 chr3L 4901137 intergenic CG13704 + chr3L 4904242 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-153 343 chr3L 5103614 5103624 chr3L 5103692 5103703 5 79 3.0 0.0 1.5 2.0 89 chr3L 5103614 intergenic not near genes chr3L 5103658 intergenic not near genes chr3L 5103703 intergenic not near genes chr3L_5_5100001 chr3L_5100001 RAL-153 344 chr3L 5104492 5104507 chr3L 5124626 5124629 4 20131 0.5 0.0 0.2 3.3 20137 chr3L 5104492 intergenic not near genes chr3L 5114560 intergenic not near genes chr3L 5124629 intergenic not near genes chr3L_4_5110001 chr3L_5110001 RAL-153 345 chr3L 5537720 5537752 chr3L 5538062 5538069 jockey 5 337 2.0 3.5 2.8 1.3 349 chr3L 5537720 intergenic not near genes chr3L 5537894 intergenic not near genes chr3L 5538069 intergenic CG10625 - chr3L_5_5535001 chr3L_5535001 RAL-153 346 chr3L 6040368 6040393 chr3L 6042724 6042748 Doc 5 2356 1.0 1.5 1.2 2.3 2380 chr3L 6040368 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042748 intergenic not near genes chr3L_5_6040001 chr3L_6040001 RAL-153 347 chr3L 6052652 6052663 chr3L 6052737 6052747 9 84 12.0 10.5 11.2 0.7 95 chr3L 6052652 exon Jon65Aii + chr3L 6052700 intron Jon65Aii + chr3L 6052747 exon Jon65Aii + chr3L_9_6050001 chr3L_6050001 RAL-153 348 chr3L 6159942 6159956 chr3L 6160022 6160036 5 77 2.0 0.0 1.0 2.5 94 chr3L 6159942 intergenic not near genes chr3L 6159989 intergenic not near genes chr3L 6160036 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-153 349 chr3L 6335010 6335032 chr3L 6335481 6335503 297 6 471 1.0 3.5 2.2 1.9 493 chr3L 6335010 intron CG13300 - chr3L 6335256 intron CG13300 - chr3L 6335503 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-153 350 chr3L 6974506 6974515 chr3L 6974607 6974615 5 100 0.0 3.5 1.8 1.8 109 chr3L 6974506 intron Galphai - chr3L 6974560 intron Galphai - chr3L 6974615 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-153 351 chr3L 7244934 7244959 chr3L 7245022 7245051 7 91 2.5 2.5 2.5 2.0 117 chr3L 7244934 exon mei-P22 + chr3L 7244992 exon mei-P22 + chr3L 7245051 exon mei-P22 + chr3L_7_7240001 chr3L_7240001 RAL-153 352 chr3L 7277107 7277138 chr3L 7277209 7277239 4 100 1.5 2.0 1.8 1.4 132 chr3L 7277107 exon unc-13-4A - chr3L 7277173 intron unc-13-4A - chr3L 7277239 intron unc-13-4A - chr3L_4_7275001 chr3L_7275001 RAL-153 353 chr3L 7377318 7377344 chr3L 7380423 7380449 297 5 3102 2.0 1.0 1.5 2.0 3131 chr3L 7377318 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380449 intron SMSr - chr3L_5_7375001 chr3L_7375001 RAL-153 354 chr3L 7793713 7793744 chr3L 7800764 7800796 297 4 7051 1.0 2.0 1.5 1.6 7083 chr3L 7793713 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800796 intron CG32369 - chr3L_4_7795001 chr3L_7795001 RAL-153 355 chr3L 7803134 7803143 chr3L 7803205 7803217 4 75 1.5 0.5 1.0 2.0 83 chr3L 7803134 intron CG32369 - chr3L 7803176 intron CG32369 - chr3L 7803217 intron CG32369 - chr3L_4_7800001 chr3L_7800001 RAL-153 356 chr3L 8481798 8481805 chr3L 8490936 8490945 roo 4 9138 2.0 4.0 3.0 1.0 9147 chr3L 8481798 intron CG43163 - chr3L 8486372 intron CG43163 - chr3L 8490945 intron CG43163 - chr3L_4_8485001 chr3L_8485001 RAL-153 357 chr3L 8579946 8579963 chr3L 8580296 8580313 4 347 1.0 2.0 1.5 1.6 367 chr3L 8579946 intron CG43078 + chr3L 8580130 intron CG43078 + chr3L 8580313 intron CG43078 + chr3L_4_8580001 chr3L_8580001 RAL-153 358 chr3L 8849213 8849244 chr3L 8849290 8849324 5 78 1.5 1.0 1.2 2.3 111 chr3L 8849213 intron dally + chr3L 8849268 intron dally + chr3L 8849324 intron dally + chr3L_5_8845001 chr3L_8845001 RAL-153 359 chr3L 8884407 8884426 chr3L 8884602 8884625 4 196 0.0 0.0 0.0 4.0 218 chr3L 8884407 intron dally + chr3L 8884516 intron dally + chr3L 8884625 intron dally + chr3L_4_8880001 chr3L_8880001 RAL-153 360 chr3L 9008643 9008671 chr3L 9008726 9008744 6 78 2.5 2.5 2.5 1.7 101 chr3L 9008643 3` UTR CG5194 - chr3L 9008694 3` UTR CG5194 - chr3L 9008744 3` UTR CG5194 - chr3L_6_9005001 chr3L_9005001 RAL-153 361 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464652 2.0 14.5 8.2 0.4 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-153 362 chr3L 9443508 9443541 chr3L 9445298 9445332 S-element 8 1790 0.0 2.0 1.0 4.0 1824 chr3L 9443508 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445332 intron CG33926 + chr3L_8_9440001 chr3L_9440001 RAL-153 363 chr3L 9775387 9775395 chr3L 9775733 9775755 7 358 0.0 5.5 2.8 1.8 368 chr3L 9775387 intron CG8177 + chr3L 9775571 intron CG8177 + chr3L 9775755 intron CG8177 + chr3L_7_9775001 chr3L_9775001 RAL-153 364 chr3L 9871200 9871206 chr3L 9871296 9871302 4 96 3.5 2.5 3.0 1.0 102 chr3L 9871200 intergenic not near genes chr3L 9871251 intergenic not near genes chr3L 9871302 intergenic not near genes chr3L_4_9870001 chr3L_9870001 RAL-153 365 chr3L 9929667 9929684 chr3L 9938446 9938452 roo 5 8776 3.0 1.5 2.2 1.6 8785 chr3L 9929667 intron CG34356 + chr3L 9934060 intron CG34356 + chr3L 9938452 intron CG34356 + chr3L_5_9930001 chr3L_9930001 RAL-153 366 chr3L 10035216 10035247 chr3L 10035302 10035333 5 86 1.5 1.0 1.2 2.3 117 chr3L 10035216 intron dpr6 + chr3L 10035274 intron dpr6 + chr3L 10035333 intron dpr6 + chr3L_5_10035001 chr3L_10035001 RAL-153 367 chr3L 11187711 11187730 chr3L 11187791 11187811 4 81 0.0 1.5 0.8 2.2 100 chr3L 11187711 intron GlcAT-P - chr3L 11187761 intron GlcAT-P - chr3L 11187811 intron GlcAT-P - chr3L_4_11185001 chr3L_11185001 RAL-153 368 chr3L 11588739 11588759 chr3L 11588895 11588915 6 156 0.0 3.0 1.5 2.4 176 chr3L 11588739 intergenic not near genes chr3L 11588827 intergenic not near genes chr3L 11588915 intergenic not near genes chr3L_6_11585001 chr3L_11585001 RAL-153 369 chr3L 11678099 11678123 chr3L 11678185 11678210 4 87 1.5 1.0 1.2 1.8 111 chr3L 11678099 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678210 intron CG32085 - chr3L_4_11675001 chr3L_11675001 RAL-153 370 chr3L 11723084 11723086 chr3L 11727878 11727881 Doc 4 4794 2.0 3.0 2.5 1.1 4797 chr3L 11723084 3` UTR Bmcp + chr3L 11725482 intron Bmcp + chr3L 11727881 3` UTR Bmcp + chr3L_4_11725001 chr3L_11725001 RAL-153 371 chr3L 11740141 11740153 chr3L 11740237 11740245 4 95 7.0 6.0 6.5 0.5 104 chr3L 11740141 intron CG6024 - chr3L 11740193 intron CG6024 - chr3L 11740245 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-153 372 chr3L 802565 802566 chr3L 11777678 11777678 6 10975112 12.0 14.5 13.2 0.4 10975113 chr3L 802565 intergenic not near genes chr3L 6290122 intergenic not near genes chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_6290001 chr3L_6290001 RAL-153 373 chr3L 7749470 7749471 chr3L 11777678 11777678 7 4028208 7.5 14.5 11.0 0.6 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_9760001 chr3L_9760001 RAL-153 374 chr3L 9313026 9313027 chr3L 11777678 11777678 5 2464651 2.0 14.5 8.2 0.5 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_10545001 chr3L_10545001 RAL-153 375 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 15.5 6.0 10.8 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-153 376 chr3L 11864552 11864584 chr3L 11865847 11865878 pogo 7 1293 1.0 3.0 2.0 2.3 1326 chr3L 11864552 intron CG44837 - chr3L 11865215 intron CG44837 - chr3L 11865878 intron CG44837 - chr3L_7_11865001 chr3L_11865001 RAL-153 377 chr3L 12013912 12013938 chr3L 12014003 12014029 11 90 2.5 3.5 3.0 2.8 117 chr3L 12013912 intron rols - chr3L 12013970 intron rols - chr3L 12014029 intron rols - chr3L_11_12010001 chr3L_12010001 RAL-153 378 chr3L 12075425 12075450 chr3L 12075513 12075538 6 88 2.5 0.0 1.2 2.7 113 chr3L 12075425 intron Sema-5c - chr3L 12075482 intron Sema-5c - chr3L 12075538 intron Sema-5c - chr3L_6_12075001 chr3L_12075001 RAL-153 379 chr3L 12304093 12304118 chr3L 12304169 12304194 5 75 0.5 3.5 2.0 1.7 101 chr3L 12304093 intergenic not near genes chr3L 12304144 intergenic not near genes chr3L 12304194 intergenic not near genes chr3L_5_12300001 chr3L_12300001 RAL-153 380 chr3L 12319739 12319764 chr3L 12319888 12319902 4 143 0.5 0.5 0.5 2.7 163 chr3L 12319739 intergenic not near genes chr3L 12319820 intergenic not near genes chr3L 12319902 intergenic not near genes chr3L_4_12315001 chr3L_12315001 RAL-153 381 chr3L 12335387 12335409 chr3L 12335466 12335488 6 78 4.5 3.5 4.0 1.2 101 chr3L 12335387 exon CG32105 + chr3L 12335438 3` UTR CG32105 + chr3L 12335488 3` UTR CG32105 + chr3L_6_12335001 chr3L_12335001 RAL-153 382 chr3L 12369547 12369568 chr3L 12369636 12369658 5 89 0.5 1.0 0.8 2.8 111 chr3L 12369547 intron Ncc69 - chr3L 12369602 intron Ncc69 - chr3L 12369658 intron Ncc69 - chr3L_5_12365001 chr3L_12365001 RAL-153 383 chr3L 12437450 12437478 chr3L 12437538 12437560 4 82 2.0 4.0 3.0 1.0 110 chr3L 12437450 intergenic not near genes chr3L 12437505 intergenic not near genes chr3L 12437560 intergenic not near genes chr3L_4_12435001 chr3L_12435001 RAL-153 384 chr3L 12476288 12476314 chr3L 12476364 12476390 7 76 1.5 1.5 1.5 2.8 102 chr3L 12476288 intron CG10663 - chr3L 12476339 intron CG10663 - chr3L 12476390 intron CG10663 - chr3L_7_12475001 chr3L_12475001 RAL-153 385 chr3L 12578054 12578072 chr3L 12578142 12578160 5 88 0.5 3.0 1.8 1.8 106 chr3L 12578054 intergenic not near genes chr3L 12578107 intergenic not near genes chr3L 12578160 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-153 386 chr3L 12957796 12957817 chr3L 12962278 12962299 copia 5 4482 0.0 1.0 0.5 3.3 4503 chr3L 12957796 intergenic not near genes chr3L 12960048 intergenic not near genes chr3L 12962299 intergenic not near genes chr3L_5_12960001 chr3L_12960001 RAL-153 387 chr3L 13361774 13361807 chr3L 13361859 13361891 9 81 1.5 3.0 2.2 2.8 117 chr3L 13361774 intergenic not near genes chr3L 13361832 intergenic not near genes chr3L 13361891 intergenic not near genes chr3L_9_13360001 chr3L_13360001 RAL-153 388 chr3L 13525154 13525182 chr3L 13532950 13532976 roo 11 7795 0.5 2.0 1.2 5.0 7822 chr3L 13525154 intergenic not near genes chr3L 13529065 intergenic not near genes chr3L 13532976 intergenic not near genes chr3L_11_13525001 chr3L_13525001 RAL-153 389 chr3L 13892090 13892117 chr3L 13892194 13892221 9 105 28.0 32.5 30.2 0.3 131 chr3L 13892090 intron dysc - chr3L 13892156 intron dysc - chr3L 13892221 intron dysc - chr3L_9_13890001 chr3L_13890001 RAL-153 390 chr3L 14312040 14312057 chr3L 14316854 14316870 X-element 7 4812 3.5 4.0 3.8 1.5 4830 chr3L 14312040 exon fz + chr3L 14314455 intron fz + chr3L 14316870 intron fz + chr3L_7_14310001 chr3L_14310001 RAL-153 391 chr3L 15554928 15554952 chr3L 15556715 15556739 S-element 4 1785 0.5 1.0 0.8 2.2 1811 chr3L 15554928 intron AGO2 + chr3L 15555834 intron AGO2 + chr3L 15556739 intron AGO2 + chr3L_4_15555001 chr3L_15555001 RAL-153 392 chr3L 16184106 16184132 chr3L 16188925 16188950 X-element 8 4818 0.5 3.0 1.8 2.9 4844 chr3L 16184106 intergenic not near genes chr3L 16186528 intergenic not near genes chr3L 16188950 intergenic not near genes chr3L_8_16185001 chr3L_16185001 RAL-153 393 chr3L 16279087 16279102 chr3L 16279168 16279183 4 81 3.0 1.0 2.0 1.3 96 chr3L 16279087 intron CG13050 - chr3L 16279135 intron CG13050 - chr3L 16279183 intron CG13050 - chr3L_4_16275001 chr3L_16275001 RAL-153 394 chr3L 16427093 16427124 chr3L 16427175 16427189 6 73 1.0 1.5 1.2 2.7 96 chr3L 16427093 intron,intron CG33158 +,dsx-c73A - chr3L 16427141 intron,intron CG33158 +,dsx-c73A - chr3L 16427189 intron,intron CG33158 +,dsx-c73A - chr3L_6_16425001 chr3L_16425001 RAL-153 395 chr3L 16450031 16450052 chr3L 16450104 16450136 7 83 1.5 3.5 2.5 2.0 105 chr3L 16450031 intron,intron CG33158 +,dsx-c73A - chr3L 16450084 intron,intron CG33158 +,dsx-c73A - chr3L 16450136 intron,intron CG33158 +,dsx-c73A - chr3L_7_16450001 chr3L_16450001 RAL-153 396 chr3L 16493982 16494013 chr3L 16494496 16494497 jockey 6 510 1.5 1.5 1.5 2.4 515 chr3L 16493982 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494240 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494497 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_6_16490001 chr3L_16490001 RAL-153 397 chr3L 16560314 16560333 chr3L 16560387 16560417 6 83 2.0 1.0 1.5 2.4 103 chr3L 16560314 intergenic not near genes chr3L 16560366 intergenic not near genes chr3L 16560417 intergenic not near genes chr3L_6_16560001 chr3L_16560001 RAL-153 398 chr3L 16587237 16587262 chr3L 16587382 16587409 7 141 3.5 3.0 3.2 1.7 172 chr3L 16587237 5` UTR CG32163 + chr3L 16587323 intron CG32163 + chr3L 16587409 intron CG32163 + chr3L_7_16585001 chr3L_16585001 RAL-153 399 chr3L 16616520 16616543 chr3L 16621840 16621871 297 5 5325 2.0 4.0 3.0 1.2 5351 chr3L 16616520 3` UTR Abl - chr3L 16619196 3` UTR Abl - chr3L 16621871 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-153 400 chr3L 16820674 16820695 chr3L 16820761 16820783 4 85 1.0 0.5 0.8 2.2 109 chr3L 16820674 intron CG13024 - chr3L 16820728 intron CG13024 - chr3L 16820783 intron CG13024 - chr3L_4_16820001 chr3L_16820001 RAL-153 401 chr3L 16885819 16885850 chr3L 16885903 16885935 6 82 0.0 1.5 0.8 3.3 116 chr3L 16885819 intron Lmpt + chr3L 16885877 intron Lmpt + chr3L 16885935 intron Lmpt + chr3L_6_16885001 chr3L_16885001 RAL-153 402 chr3L 16926098 16926130 chr3L 16926175 16926207 8 77 2.0 0.0 1.0 4.0 109 chr3L 16926098 intron CG13023 - chr3L 16926152 intron CG13023 - chr3L 16926207 intron CG13023 - chr3L_8_16925001 chr3L_16925001 RAL-153 403 chr3L 16945727 16945754 chr3L 16954879 16954896 roo 6 9150 4.5 1.0 2.8 1.6 9169 chr3L 16945727 exon Obp73a + chr3L 16950312 intergenic not near genes chr3L 16954896 5` UTR Nc73EF + chr3L_6_16950001 chr3L_16950001 RAL-153 404 chr3L 17004394 17004412 chr3L 17004514 17004531 8 120 0.5 2.5 1.5 3.2 137 chr3L 17004394 intron CG3764 - chr3L 17004462 intron CG3764 - chr3L 17004531 intron CG3764 - chr3L_8_17000001 chr3L_17000001 RAL-153 405 chr3L 17120656 17120682 chr3L 17120732 17120758 4 75 0.0 0.5 0.2 3.3 102 chr3L 17120656 intron Rbp6 - chr3L 17120707 intron Rbp6 - chr3L 17120758 intron Rbp6 - chr3L_4_17120001 chr3L_17120001 RAL-153 406 chr3L 17142746 17142753 chr3L 17142969 17142970 5 223 1.5 2.5 2.0 1.7 224 chr3L 17142746 intron Rbp6 - chr3L 17142858 intron Rbp6 - chr3L 17142970 intron Rbp6 - chr3L_5_17140001 chr3L_17140001 RAL-153 407 chr3L 17146954 17146987 chr3L 17147036 17147069 11 81 3.5 3.0 3.2 2.6 115 chr3L 17146954 intron Rbp6 - chr3L 17147012 intron Rbp6 - chr3L 17147069 intron Rbp6 - chr3L_11_17145001 chr3L_17145001 RAL-153 408 chr3L 17386814 17386829 chr3L 17386876 17386906 7 72 4.0 2.0 3.0 1.8 92 chr3L 17386814 intron CG13731 - chr3L 17386860 intron CG13731 - chr3L 17386906 intron CG13731 - chr3L_7_17385001 chr3L_17385001 RAL-153 409 chr3L 17510733 17510765 chr3L 17510816 17510849 16 82 3.0 6.5 4.8 2.8 116 chr3L 17510733 exon Oatp74D + chr3L 17510791 intron Oatp74D + chr3L 17510849 intron Oatp74D + chr3L_16_17510001 chr3L_17510001 RAL-153 410 chr3L 17516979 17517012 chr3L 17524536 17524553 412 8 7552 3.5 2.5 3.0 2.0 7574 chr3L 17516979 intron CG7564 + chr3L 17520766 intron CG7564 + chr3L 17524553 3` UTR CG7564 + chr3L_8_17520001 chr3L_17520001 RAL-153 411 chr3L 17580589 17580611 chr3L 17580765 17580787 4 176 1.0 0.0 0.5 2.7 198 chr3L 17580589 intron Eip74EF - chr3L 17580688 intron Eip74EF - chr3L 17580787 intron Eip74EF - chr3L_4_17580001 chr3L_17580001 RAL-153 412 chr3L 17730855 17730875 chr3L 17738178 17738201 mdg1 6 7327 0.5 1.5 1.0 3.0 7346 chr3L 17730855 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738201 intron Ccn + chr3L_6_17730001 chr3L_17730001 RAL-153 413 chr3L 18047715 18047740 chr3L 18056772 18056797 roo 5 9057 1.0 2.5 1.8 1.8 9082 chr3L 18047715 intron Eip75B - chr3L 18052256 intron Eip75B - chr3L 18056797 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-153 414 chr3L 18138154 18138177 chr3L 18138237 18138245 5 76 3.0 1.5 2.2 1.6 91 chr3L 18138154 intergenic not near genes chr3L 18138200 intergenic not near genes chr3L 18138245 intergenic not near genes chr3L_5_18135001 chr3L_18135001 RAL-153 415 chr3L 18528625 18528656 chr3L 18537786 18537817 roo 4 9161 1.5 1.5 1.5 1.6 9192 chr3L 18528625 intergenic not near genes chr3L 18533221 intergenic not near genes chr3L 18537817 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-153 416 chr3L 18593962 18593976 chr3L 18595941 18595956 Doc 4 1979 1.0 0.5 0.8 2.2 1994 chr3L 18593962 intergenic term - chr3L 18594959 intergenic not near genes chr3L 18595956 intergenic CR45389 + chr3L_4_18590001 chr3L_18590001 RAL-153 417 chr3L 18772407 18772442 chr3L 18781088 18781122 roo 10 8679 2.0 4.0 3.0 2.5 8715 chr3L 18772407 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781122 intron ftz-f1 - chr3L_10_18775001 chr3L_18775001 RAL-153 418 chr3L 18888444 18888467 chr3L 18888526 18888547 4 81 0.5 1.0 0.8 2.2 103 chr3L 18888444 intron CG3961 - chr3L 18888496 intron CG3961 - chr3L 18888547 intron CG3961 - chr3L_4_18885001 chr3L_18885001 RAL-153 419 chr3L 19008837 19008873 chr3L 19009174 19009211 jockey 9 335 2.0 3.5 2.8 2.4 374 chr3L 19008837 intron nkd - chr3L 19009024 intron nkd - chr3L 19009211 intron nkd - chr3L_9_19005001 chr3L_19005001 RAL-153 420 chr3L 19117055 19117075 chr3L 19124494 19124517 mdg1 5 7444 1.5 2.0 1.8 1.8 7462 chr3L 19117055 intron CG14082 - chr3L 19120786 intron CG14082 - chr3L 19124517 intron CG14082 - chr3L_5_19120001 chr3L_19120001 RAL-153 421 chr3L 19527928 19527942 chr3L 19528007 19528021 4 79 4.0 0.5 2.2 1.2 93 chr3L 19527928 intergenic not near genes chr3L 19527974 intergenic not near genes chr3L 19528021 intergenic not near genes chr3L_4_19525001 chr3L_19525001 RAL-153 422 chr3L 19848503 19848530 chr3L 19857693 19857709 roo 8 9185 4.0 3.5 3.8 1.7 9206 chr3L 19848503 intron Papss + chr3L 19853106 intron Papss + chr3L 19857709 intron Papss + chr3L_8_19850001 chr3L_19850001 RAL-153 423 chr3L 19861830 19861844 chr3L 19863617 19863632 S-element 5 1788 0.5 2.0 1.2 2.3 1802 chr3L 19861830 5` UTR CR45433 + chr3L 19862731 intergenic not near genes chr3L 19863632 intergenic not near genes chr3L_5_19860001 chr3L_19860001 RAL-153 424 chr3L 20113660 20113685 chr3L 20122916 20122934 roo 5 9255 2.0 1.0 1.5 2.0 9274 chr3L 20113660 intergenic not near genes chr3L 20118297 intergenic not near genes chr3L 20122934 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-153 425 chr3L 20183432 20183441 chr3L 20183513 20183540 5 93 0.0 1.0 0.5 3.3 108 chr3L 20183432 intron CG42674 - chr3L 20183486 intron CG42674 - chr3L 20183540 intron CG42674 - chr3L_5_20180001 chr3L_20180001 RAL-153 426 chr3L 20251083 20251114 chr3L 20251287 20251320 4 205 1.0 1.5 1.2 1.8 237 chr3L 20251083 intron rdgC + chr3L 20251202 intron rdgC + chr3L 20251320 intron rdgC + chr3L_4_20250001 chr3L_20250001 RAL-153 427 chr3L 20386939 20386961 chr3L 20387041 20387063 4 102 0.0 0.5 0.2 3.3 124 chr3L 20386939 intron fbl + chr3L 20387001 intron fbl + chr3L 20387063 intron fbl + chr3L_4_20385001 chr3L_20385001 RAL-153 428 chr3L 20426212 20426225 chr3L 20426371 20426390 4 165 4.0 6.0 5.0 0.7 178 chr3L 20426212 3` UTR CG5274 - chr3L 20426301 3` UTR CG5274 - chr3L 20426390 3` UTR CG5274 - chr3L_4_20425001 chr3L_20425001 RAL-153 429 chr3L 20849278 20849296 chr3L 20849356 20849372 9 78 0.5 4.0 2.2 2.8 94 chr3L 20849278 intron CG32432 - chr3L 20849325 intron CG32432 - chr3L 20849372 intron CG32432 - chr3L_9_20845001 chr3L_20845001 RAL-153 430 chr3L 21007242 21007267 chr3L 21007472 21007498 6 230 2.0 3.5 2.8 1.6 256 chr3L 21007242 intron skd - chr3L 21007370 intron skd - chr3L 21007498 intron skd - chr3L_6_21005001 chr3L_21005001 RAL-153 431 chr3L 21014921 21014940 chr3L 21023402 21023421 Tirant 5 8478 2.0 3.0 2.5 1.4 8500 chr3L 21014921 intron skd - chr3L 21019171 intron skd - chr3L 21023421 intron skd - chr3L_5_21015001 chr3L_21015001 RAL-153 432 chr3L 21161665 21161691 chr3L 21161738 21161764 4 73 1.5 1.5 1.5 1.6 99 chr3L 21161665 intron Ac78C - chr3L 21161714 intron Ac78C - chr3L 21161764 intron Ac78C - chr3L_4_21160001 chr3L_21160001 RAL-153 433 chr3L 21172857 21172873 chr3L 21172960 21172961 4 98 1.0 1.5 1.2 1.8 104 chr3L 21172857 5` UTR chb + chr3L 21172909 5` UTR chb + chr3L 21172961 5` UTR chb + chr3L_4_21170001 chr3L_21170001 RAL-153 434 chr3L 21186050 21186075 chr3L 21186125 21186145 6 73 6.5 3.5 5.0 1.0 95 chr3L 21186050 intron CG42337 - chr3L 21186098 intron CG42337 - chr3L 21186145 intron CG42337 - chr3L_6_21185001 chr3L_21185001 RAL-153 435 chr3L 21243752 21243769 chr3L 21251310 21251330 412 4 7560 4.0 1.0 2.5 1.1 7578 chr3L 21243752 intron Eip78C + chr3L 21247541 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-153 436 chr3L 21437605 21437633 chr3L 21437711 21437737 6 106 0.0 3.5 1.8 2.1 132 chr3L 21437605 3` UTR Aef1 + chr3L 21437671 3` UTR Aef1 + chr3L 21437737 3` UTR Aef1 + chr3L_6_21435001 chr3L_21435001 RAL-153 437 chr3L 21498832 21498866 chr3L 21500468 21500476 1360 4 1629 2.5 0.5 1.5 1.6 1644 chr3L 21498832 intron Glg1 - chr3L 21499654 intron Glg1 - chr3L 21500476 intron Glg1 - chr3L_4_21495001 chr3L_21495001 RAL-153 438 chr3L 21509655 21509682 chr3L 21509732 21509759 4 76 2.5 2.5 2.5 1.1 104 chr3L 21509655 intron M6 + chr3L 21509707 intron M6 + chr3L 21509759 intron M6 + chr3L_4_21505001 chr3L_21505001 RAL-153 439 chr3L 21637323 21637355 chr3L 21637410 21637442 5 86 1.5 1.0 1.2 2.3 119 chr3L 21637323 intron CG32444 + chr3L 21637382 intron CG32444 + chr3L 21637442 intron CG32444 + chr3L_5_21635001 chr3L_21635001 RAL-153 440 chr3L 21749316 21749351 chr3L 21754476 21754503 Doc 6 5154 0.5 3.5 2.0 2.0 5187 chr3L 21749316 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754503 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-153 441 chr3L 21836731 21836754 chr3L 21836817 21836828 8 84 2.5 2.5 2.5 2.3 97 chr3L 21836731 3` UTR P5CDh1 - chr3L 21836780 3` UTR P5CDh1 - chr3L 21836828 3` UTR P5CDh1 - chr3L_8_21835001 chr3L_21835001 RAL-153 442 chr3L 22033700 22033718 chr3L 22033777 22033796 6 78 0.5 1.0 0.8 3.3 96 chr3L 22033700 intergenic not near genes chr3L 22033748 intergenic not near genes chr3L 22033796 intergenic not near genes chr3L_6_22030001 chr3L_22030001 RAL-153 443 chr3L 22099678 22099706 chr3L 22105864 22105892 3S18 7 6186 2.0 2.5 2.2 2.2 6214 chr3L 22099678 intergenic not near genes chr3L 22102785 intergenic not near genes chr3L 22105892 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-153 444 chr3L 22166456 22166473 chr3L 22166529 22166550 4 74 0.0 0.0 0.0 4.0 94 chr3L 22166456 intron olf413 + chr3L 22166503 intron olf413 + chr3L 22166550 intron olf413 + chr3L_4_22165001 chr3L_22165001 RAL-153 445 chr3L 22447200 22447230 chr3L 22447291 22447320 7 89 1.5 2.5 2.0 2.3 120 chr3L 22447200 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447320 intergenic not near genes chr3L_7_22445001 chr3L_22445001 RAL-153 446 chr3L 22555773 22555802 chr3L 22563243 22563266 blood 5 7464 3.5 2.0 2.8 1.3 7493 chr3L 22555773 intergenic not near genes chr3L 22559520 intergenic not near genes chr3L 22563266 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-153 447 chr3L 22569577 22569597 chr3L 22569675 22569690 6 97 0.5 0.0 0.2 5.0 113 chr3L 22569577 intergenic not near genes chr3L 22569634 intergenic not near genes chr3L 22569690 intergenic not near genes chr3L_6_22565001 chr3L_22565001 RAL-153 448 chr3L 22577622 22577643 chr3L 22582408 22582430 Doc 8 4785 3.0 0.5 1.8 2.9 4808 chr3L 22577622 intergenic not near genes chr3L 22580026 intergenic not near genes chr3L 22582430 3` UTR CG14459 - chr3L_8_22580001 chr3L_22580001 RAL-153 449 chr3L 22732481 22732495 chr3L 22732562 22732576 8 81 1.5 3.0 2.2 2.5 95 chr3L 22732481 intron CG11367 + chr3L 22732528 intron CG11367 + chr3L 22732576 intron CG11367 + chr3L_8_22730001 chr3L_22730001 RAL-153 450 chr3L 22897212 22897224 chr3L 22897295 22897306 6 81 1.0 3.5 2.2 1.9 94 chr3L 22897212 intergenic not near genes chr3L 22897259 intergenic not near genes chr3L 22897306 intergenic not near genes chr3L_6_22895001 chr3L_22895001 RAL-153 451 chr3L 9307795 9307796 chr3L 22908066 22908066 5 13600270 3.0 8.0 5.5 0.8 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_5_16105001 chr3L_16105001 RAL-153 452 chr3L 19220633 19220636 chr3L 22908066 22908066 16 3687432 5.5 8.0 6.8 2.1 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_16_21060001 chr3L_21060001 RAL-153 453 chr3L 19220633 19220637 chr3L 22908067 22908067 10 3687433 5.5 8.5 7.0 1.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_10_21060001 chr3L_21060001 RAL-153 454 chr3R 4206073 4206104 chr3R 4211648 4211656 mdg3 7 5571 3.0 2.0 2.5 2.0 5583 chr3R 4206073 intron CG14636 - chr3R 4208864 intron CG14636 - chr3R 4211656 intron CG14636 - chr3R_7_4205001 chr3R_4205001 RAL-153 455 chr3R 4241061 4241095 chr3R 4241139 4241172 6 78 0.5 2.0 1.2 2.7 111 chr3R 4241061 3` UTR CG14642 - chr3R 4241116 3` UTR CG14642 - chr3R 4241172 intron CG14642 - chr3R_6_4240001 chr3R_4240001 RAL-153 456 chr3R 4366760 4366791 chr3R 4375142 4375170 roo 5 8382 1.0 0.5 0.8 2.8 8410 chr3R 4366760 3` UTR CG1090 + chr3R 4370965 intergenic not near genes chr3R 4375170 5` UTR CR44922 + chr3R_5_4370001 chr3R_4370001 RAL-153 457 chr3R 4408411 4408430 chr3R 4412715 4412729 Juan 4 4302 3.5 0.5 2.0 1.3 4318 chr3R 4408411 intron CG32944 - chr3R 4410570 intron CG32944 - chr3R 4412729 intron CG32944 - chr3R_4_4410001 chr3R_4410001 RAL-153 458 chr3R 4636599 4636622 chr3R 4637019 4637042 INE-1 8 420 1.5 1.5 1.5 3.2 443 chr3R 4636599 intergenic not near genes chr3R 4636820 intergenic not near genes chr3R 4637042 intergenic not near genes chr3R_8_4635001 chr3R_4635001 RAL-153 459 chr3R 4753249 4753270 chr3R 4757549 4757561 F-element 8 4300 3.0 4.5 3.8 1.7 4312 chr3R 4753249 intron,intron atms +,CG44098 - chr3R 4755405 intron,intron atms +,CG44098 - chr3R 4757561 intron,exon atms +,CG44098 - chr3R_8_4755001 chr3R_4755001 RAL-153 460 chr3R 4887489 4887507 chr3R 4894866 4894872 rover 4 7373 2.5 5.0 3.8 0.8 7383 chr3R 4887489 intergenic not near genes chr3R 4891180 intergenic not near genes chr3R 4894872 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-153 461 chr3R 4896300 4896322 chr3R 4896391 4896415 5 91 1.0 1.5 1.2 2.3 115 chr3R 4896300 intergenic CR45580 + chr3R 4896358 intergenic CR45580 + chr3R 4896415 intergenic CR45580 + chr3R_5_4895001 chr3R_4895001 RAL-153 462 chr3R 5236234 5236246 chr3R 5236346 5236374 9 125 3.0 3.5 3.2 2.1 140 chr3R 5236234 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236304 3` UTR rtp - chr3R 5236374 3` UTR rtp - chr3R_9_5235001 chr3R_5235001 RAL-153 463 chr3R 5250887 5250916 chr3R 5250993 5251025 4 108 1.0 2.5 1.8 1.4 138 chr3R 5250887 intron CG12163 - chr3R 5250956 intron CG12163 - chr3R 5251025 intron CG12163 - chr3R_4_5250001 chr3R_5250001 RAL-153 464 chr3R 5278097 5278120 chr3R 5278176 5278196 7 79 2.0 4.5 3.2 1.7 99 chr3R 5278097 intron mtd - chr3R 5278146 intron mtd - chr3R 5278196 intron mtd - chr3R_7_5275001 chr3R_5275001 RAL-153 465 chr3R 5385974 5386002 chr3R 5386142 5386173 9 169 5.0 4.0 4.5 1.6 199 chr3R 5385974 intron kkv - chr3R 5386074 intron kkv - chr3R 5386173 intron kkv - chr3R_9_5385001 chr3R_5385001 RAL-153 466 chr3R 5627150 5627173 chr3R 5627559 5627584 10 409 3.5 5.0 4.2 1.9 434 chr3R 5627150 intergenic not near genes chr3R 5627367 intergenic CG31551 + chr3R 5627584 intergenic CG31551 + chr3R_10_5625001 chr3R_5625001 RAL-153 467 chr3R 5712084 5712093 chr3R 5712171 5712181 5 86 8.5 2.5 5.5 0.8 97 chr3R 5712084 3` UTR plx + chr3R 5712132 3` UTR plx + chr3R 5712181 3` UTR plx + chr3R_5_5710001 chr3R_5710001 RAL-153 468 chr3R 5712096 5712115 chr3R 5712169 5712203 9 84 4.0 2.5 3.2 2.1 107 chr3R 5712096 3` UTR plx + chr3R 5712150 3` UTR plx + chr3R 5712203 3` UTR plx + chr3R_9_5710001 chr3R_5710001 RAL-153 469 chr3R 5746016 5746046 chr3R 5746257 5746272 pogo 7 238 3.0 3.0 3.0 1.8 256 chr3R 5746016 3` UTR Madm + chr3R 5746144 3` UTR Madm + chr3R 5746272 3` UTR Madm + chr3R_7_5745001 chr3R_5745001 RAL-153 470 chr3R 5747018 5747044 chr3R 5753208 5753221 diver 7 6188 0.5 0.0 0.2 5.8 6203 chr3R 5747018 intergenic Madm + chr3R 5750120 intergenic not near genes chr3R 5753221 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 RAL-153 471 chr3R 5895962 5895985 chr3R 5896176 5896199 5 213 2.0 0.5 1.2 2.3 237 chr3R 5895962 intron CG34113 - chr3R 5896080 intron CG34113 - chr3R 5896199 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-153 472 chr3R 6206283 6206317 chr3R 6206497 6206534 BS 9 215 2.5 1.0 1.8 3.2 251 chr3R 6206283 exon Osi24 + chr3R 6206408 intron Osi24 + chr3R 6206534 intron Osi24 + chr3R_9_6205001 chr3R_6205001 RAL-153 473 chr3R 6661850 6661879 chr3R 6661931 6661935 5 74 2.5 0.0 1.2 2.3 85 chr3R 6661850 3` UTR lab - chr3R 6661892 3` UTR lab - chr3R 6661935 3` UTR lab - chr3R_5_6660001 chr3R_6660001 RAL-153 474 chr3R 6705691 6705717 chr3R 6705913 6705940 6 224 3.5 2.0 2.8 1.6 249 chr3R 6705691 intergenic not near genes chr3R 6705816 intergenic not near genes chr3R 6705940 intergenic not near genes chr3R_6_6705001 chr3R_6705001 RAL-153 475 chr3R 7036763 7036787 chr3R 7036841 7036866 6 75 0.0 2.0 1.0 3.0 103 chr3R 7036763 intergenic not near genes chr3R 7036814 intergenic not near genes chr3R 7036866 intergenic not near genes chr3R_6_7035001 chr3R_7035001 RAL-153 476 chr3R 7092783 7092804 chr3R 7093345 7093366 7 563 2.5 1.0 1.8 2.5 583 chr3R 7092783 3` UTR CR43685 - chr3R 7093074 intron CR43685 - chr3R 7093366 3` UTR CR43685 - chr3R_7_7090001 chr3R_7090001 RAL-153 477 chr3R 7103291 7103316 chr3R 7103366 7103392 5 75 1.5 3.5 2.5 1.4 101 chr3R 7103291 intron Alh - chr3R 7103342 intron Alh - chr3R 7103392 intron Alh - chr3R_5_7100001 chr3R_7100001 RAL-153 478 chr3R 7270941 7270961 chr3R 7271024 7271031 5 80 1.0 1.5 1.2 2.3 90 chr3R 7270941 intergenic Syt4 + chr3R 7270986 intergenic Syt4 + chr3R 7271031 intergenic Syt4 + chr3R_5_7270001 chr3R_7270001 RAL-153 479 chr3R 7511769 7511794 chr3R 7511850 7511856 6 76 3.0 2.0 2.5 1.7 87 chr3R 7511769 intron alpha-Est8 - chr3R 7511812 intron alpha-Est8 - chr3R 7511856 intron alpha-Est8 - chr3R_6_7510001 chr3R_7510001 RAL-153 480 chr3R 8182661 8182684 chr3R 8182752 8182762 5 90 1.0 2.0 1.5 2.0 101 chr3R 8182661 intergenic not near genes chr3R 8182712 intergenic not near genes chr3R 8182762 intergenic not near genes chr3R_5_8180001 chr3R_8180001 RAL-153 481 chr3R 8339246 8339247 chr3R 21907534 21907536 26 13568289 8.5 10.5 9.5 2.5 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_26_15120001 chr3R_15120001 RAL-153 482 chr3R 8393595 8393603 chr3R 8393655 8393675 7 72 4.5 4.5 4.5 1.3 80 chr3R 8393595 intron CG45263 - chr3R 8393635 intron CG45263 - chr3R 8393675 intron CG45263 - chr3R_7_8390001 chr3R_8390001 RAL-153 483 chr3R 8403005 8403041 chr3R 8412171 8412203 roo 11 9162 2.0 3.5 2.8 2.9 9198 chr3R 8403005 intron CG45263 - chr3R 8407604 intron CG45263 - chr3R 8412203 intron CG45263 - chr3R_11_8405001 chr3R_8405001 RAL-153 484 chr3R 9082044 9082062 chr3R 9082138 9082155 5 93 4.0 4.0 4.0 1.0 111 chr3R 9082044 intron pum - chr3R 9082100 intron pum - chr3R 9082155 intron pum - chr3R_5_9080001 chr3R_9080001 RAL-153 485 chr3R 9278778 9278816 chr3R 9284038 9284061 Rt1a 4 5254 1.5 0.5 1.0 2.0 5283 chr3R 9278778 intergenic not near genes chr3R 9281420 intergenic not near genes chr3R 9284061 intergenic not near genes chr3R_4_9280001 chr3R_9280001 RAL-153 486 chr3R 9319581 9319606 chr3R 9320015 9320040 jockey 5 430 0.0 2.5 1.2 2.3 459 chr3R 9319581 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320040 intron CG8861 - chr3R_5_9315001 chr3R_9315001 RAL-153 487 chr3R 9620954 9620956 chr3R 21907534 21907535 4 12286580 7.5 10.5 9.0 0.4 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-153 488 chr3R 9699975 9700004 chr3R 9700063 9700092 1360 9 88 4.5 3.5 4.0 1.8 117 chr3R 9699975 intron Unc-115a - chr3R 9700034 intron Unc-115a - chr3R 9700092 intron Unc-115a - chr3R_9_9700001 chr3R_9700001 RAL-153 489 chr3R 9745404 9745413 chr3R 9745710 9745730 5 314 4.5 3.0 3.8 1.0 326 chr3R 9745404 exon CG34409 - chr3R 9745567 intron CG34409 - chr3R 9745730 intron CG34409 - chr3R_5_9745001 chr3R_9745001 RAL-153 490 chr3R 10507253 10507280 chr3R 10507340 10507362 5 85 1.5 1.5 1.5 2.0 109 chr3R 10507253 intergenic hth - chr3R 10507308 intergenic hth - chr3R 10507362 intergenic hth - chr3R_5_10505001 chr3R_10505001 RAL-153 491 chr3R 10785821 10785841 chr3R 10785897 10785920 4 78 1.5 3.5 2.5 1.1 99 chr3R 10785821 intron Rbp1 + chr3R 10785870 intron Rbp1 + chr3R 10785920 intron Rbp1 + chr3R_4_10785001 chr3R_10785001 RAL-153 492 chr3R 10886885 10886906 chr3R 10886964 10886986 4 77 0.0 1.0 0.5 2.7 101 chr3R 10886885 intron Leash + chr3R 10886936 intron Leash + chr3R 10886986 intron Leash + chr3R_4_10885001 chr3R_10885001 RAL-153 493 chr3R 10920044 10920066 chr3R 10920122 10920144 5 77 1.0 2.0 1.5 2.0 100 chr3R 10920044 intergenic not near genes chr3R 10920094 intergenic not near genes chr3R 10920144 intergenic not near genes chr3R_5_10920001 chr3R_10920001 RAL-153 494 chr3R 11309815 11309830 chr3R 11309893 11309908 4 78 0.5 0.5 0.5 2.7 93 chr3R 11309815 intergenic not near genes chr3R 11309862 intergenic not near genes chr3R 11309908 intergenic not near genes chr3R_4_11305001 chr3R_11305001 RAL-153 495 chr3R 11325353 11325368 chr3R 11325448 11325458 5 92 1.0 4.0 2.5 1.4 105 chr3R 11325353 intergenic not near genes chr3R 11325406 intergenic not near genes chr3R 11325458 intergenic not near genes chr3R_5_11325001 chr3R_11325001 RAL-153 496 chr3R 11332906 11332919 chr3R 11332995 11333026 5 103 2.5 2.5 2.5 1.4 120 chr3R 11332906 intron pros + chr3R 11332966 intron pros + chr3R 11333026 intron pros + chr3R_5_11330001 chr3R_11330001 RAL-153 497 chr3R 11379240 11379267 chr3R 11388393 11388422 roo 7 9154 6.0 2.5 4.2 1.3 9182 chr3R 11379240 intron pros + chr3R 11383831 intron pros + chr3R 11388422 intron pros + chr3R_7_11380001 chr3R_11380001 RAL-153 498 chr3R 11695740 11695768 chr3R 11695819 11695849 4 80 0.5 0.0 0.2 3.3 109 chr3R 11695740 intergenic not near genes chr3R 11695794 intergenic not near genes chr3R 11695849 intergenic not near genes chr3R_4_11695001 chr3R_11695001 RAL-153 499 chr3R 11853438 11853465 chr3R 11853586 11853608 5 147 0.0 1.0 0.5 3.3 170 chr3R 11853438 intron CG6959 - chr3R 11853523 intron CG6959 - chr3R 11853608 intron CG6959 - chr3R_5_11850001 chr3R_11850001 RAL-153 500 chr3R 12214350 12214373 chr3R 12214433 12214463 5 86 1.5 1.0 1.2 2.3 113 chr3R 12214350 3` UTR CG4848 - chr3R 12214406 3` UTR CG4848 - chr3R 12214463 3` UTR CG4848 - chr3R_5_12210001 chr3R_12210001 RAL-153 501 chr3R 12299819 12299837 chr3R 12299899 12299918 5 85 3.0 3.0 3.0 1.2 99 chr3R 12299819 intron svp + chr3R 12299868 intron svp + chr3R 12299918 intron svp + chr3R_5_12295001 chr3R_12295001 RAL-153 502 chr3R 12436464 12436474 chr3R 12436544 12436561 4 82 5.0 1.0 3.0 1.0 97 chr3R 12436464 exon Desat2 + chr3R 12436512 exon Desat2 + chr3R 12436561 exon Desat2 + chr3R_4_12435001 chr3R_12435001 RAL-153 503 chr3R 12520705 12520723 chr3R 12520778 12520791 6 78 2.5 1.0 1.8 2.1 86 chr3R 12520705 intron Octbeta3R - chr3R 12520748 intron Octbeta3R - chr3R 12520791 intron Octbeta3R - chr3R_6_12520001 chr3R_12520001 RAL-153 504 chr3R 13061879 13061899 chr3R 13061974 13061992 4 94 1.0 1.5 1.2 1.8 113 chr3R 13061879 intron sim + chr3R 13061936 intron sim + chr3R 13061992 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-153 505 chr3R 13075362 13075389 chr3R 13075443 13075470 8 80 1.5 1.5 1.5 3.2 108 chr3R 13075362 intron sim + chr3R 13075416 intron sim + chr3R 13075470 intron sim + chr3R_8_13075001 chr3R_13075001 RAL-153 506 chr3R 13114397 13114423 chr3R 13114490 13114496 5 89 0.5 2.0 1.2 2.3 99 chr3R 13114397 intron timeout + chr3R 13114446 intron timeout + chr3R 13114496 intron timeout + chr3R_5_13110001 chr3R_13110001 RAL-153 507 chr3R 13248651 13248680 chr3R 13248750 13248779 10 98 3.0 3.5 3.2 2.4 128 chr3R 13248651 intron Ace - chr3R 13248715 intron Ace - chr3R 13248779 intron Ace - chr3R_10_13245001 chr3R_13245001 RAL-153 508 chr3R 13274224 13274234 chr3R 13274299 13274306 4 76 0.5 2.5 1.5 1.6 82 chr3R 13274224 intergenic not near genes chr3R 13274265 intergenic not near genes chr3R 13274306 intergenic not near genes chr3R_4_13270001 chr3R_13270001 RAL-153 509 chr3R 13391649 13391668 chr3R 13391726 13391745 4 78 3.5 6.0 4.8 0.7 96 chr3R 13391649 intron CCHa2 - chr3R 13391697 intron CCHa2 - chr3R 13391745 intron CCHa2 - chr3R_4_13390001 chr3R_13390001 RAL-153 510 chr3R 13668268 13668305 chr3R 13668348 13668357 8 74 2.0 5.5 3.8 1.7 89 chr3R 13668268 3` UTR Task6 - chr3R 13668312 3` UTR Task6 - chr3R 13668357 3` UTR Task6 - chr3R_8_13665001 chr3R_13665001 RAL-153 511 chr3R 13672945 13672976 chr3R 13673018 13673052 11 77 2.0 1.0 1.5 4.4 107 chr3R 13672945 intron Task6 - chr3R 13672998 intron Task6 - chr3R 13673052 intron Task6 - chr3R_11_13670001 chr3R_13670001 RAL-153 512 chr3R 13693026 13693028 chr3R 21907534 21907536 13 8214507 10.5 10.5 10.5 1.1 8214510 chr3R 13693026 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_13_17800001 chr3R_17800001 RAL-153 513 chr3R 14119685 14119715 chr3R 14119763 14119786 12 74 1.5 4.5 3.0 3.0 101 chr3R 14119685 3` UTR Abi - chr3R 14119736 3` UTR Abi - chr3R 14119786 3` UTR Abi - chr3R_12_14115001 chr3R_14115001 RAL-153 514 chr3R 14280572 14280597 chr3R 14280665 14280690 4 92 0.5 1.0 0.8 2.2 118 chr3R 14280572 intron trx - chr3R 14280631 intron trx - chr3R 14280690 intron trx - chr3R_4_14280001 chr3R_14280001 RAL-153 515 chr3R 14458908 14458914 chr3R 14458961 14458993 4 63 0.0 2.0 1.0 2.0 85 chr3R 14458908 intron cv-c - chr3R 14458950 intron cv-c - chr3R 14458993 intron cv-c - chr3R_4_14455001 chr3R_14455001 RAL-153 516 chr3R 14514480 14514513 chr3R 14514565 14514598 7 84 3.5 3.0 3.2 1.7 118 chr3R 14514480 3` UTR Pde6 - chr3R 14514539 3` UTR Pde6 - chr3R 14514598 3` UTR Pde6 - chr3R_7_14510001 chr3R_14510001 RAL-153 517 chr3R 14560897 14560924 chr3R 14560991 14561000 6 90 5.0 3.0 4.0 1.2 103 chr3R 14560897 intergenic CG14850 + chr3R 14560948 5` UTR CG14850 + chr3R 14561000 exon CG14850 + chr3R_6_14560001 chr3R_14560001 RAL-153 518 chr3R 14865224 14865247 chr3R 14865302 14865325 5 77 0.0 1.0 0.5 3.3 101 chr3R 14865224 intron btsz - chr3R 14865274 intron btsz - chr3R 14865325 intron btsz - chr3R_5_14865001 chr3R_14865001 RAL-153 519 chr3R 14898481 14898504 chr3R 14898601 14898624 7 120 3.5 2.0 2.8 1.8 143 chr3R 14898481 intergenic Nup93-2 -,CG3817 + chr3R 14898552 intergenic Nup93-2 -,CG3817 + chr3R 14898624 intergenic CG3817 +,Nup93-2 - chr3R_7_14895001 chr3R_14895001 RAL-153 520 chr3R 15079806 15079831 chr3R 15080047 15080072 pogo 5 241 2.5 1.0 1.8 1.8 266 chr3R 15079806 3` UTR CG6966 - chr3R 15079939 3` UTR CG6966 - chr3R 15080072 3` UTR CG6966 - chr3R_5_15075001 chr3R_15075001 RAL-153 521 chr3R 15286984 15286988 chr3R 21907534 21907535 6 6620549 10.0 10.5 10.2 0.5 6620551 chr3R 15286984 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_6_18595001 chr3R_18595001 RAL-153 522 chr3R 15416255 15416283 chr3R 15416330 15416363 10 77 1.0 5.5 3.2 2.4 108 chr3R 15416255 3` UTR Atx2 + chr3R 15416309 3` UTR Atx2 + chr3R 15416363 3` UTR Atx2 + chr3R_10_15415001 chr3R_15415001 RAL-153 523 chr3R 16073445 16073469 chr3R 16073548 16073573 4 102 2.5 0.5 1.5 1.6 128 chr3R 16073445 intron Mhcl - chr3R 16073509 intron Mhcl - chr3R 16073573 intron Mhcl - chr3R_4_16070001 chr3R_16070001 RAL-153 524 chr3R 16499554 16499570 chr3R 16499628 16499654 4 80 0.0 4.0 2.0 1.3 100 chr3R 16499554 intron decay - chr3R 16499604 intron decay - chr3R 16499654 intron decay - chr3R_4_16495001 chr3R_16495001 RAL-153 525 chr3R 16667081 16667107 chr3R 16667161 16667189 6 79 1.0 3.0 2.0 2.0 108 chr3R 16667081 intron Ubx - chr3R 16667135 intron Ubx - chr3R 16667189 intron Ubx - chr3R_6_16665001 chr3R_16665001 RAL-153 526 chr3R 16676476 16676503 chr3R 16676555 16676562 4 74 2.5 2.0 2.2 1.2 86 chr3R 16676476 intron Ubx - chr3R 16676519 intron Ubx - chr3R 16676562 intron Ubx - chr3R_4_16675001 chr3R_16675001 RAL-153 527 chr3R 17497966 17497989 chr3R 17498052 17498075 6 86 3.0 2.0 2.5 1.7 109 chr3R 17497966 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498075 intron Dscam3 - chr3R_6_17495001 chr3R_17495001 RAL-153 528 chr3R 17729734 17729757 chr3R 17729811 17729816 7 73 4.0 4.0 4.0 1.4 82 chr3R 17729734 intron Lgr1 + chr3R 17729775 intron Lgr1 + chr3R 17729816 intron Lgr1 + chr3R_7_17725001 chr3R_17725001 RAL-153 529 chr3R 18126210 18126230 chr3R 18126288 18126308 5 78 4.0 2.5 3.2 1.2 98 chr3R 18126210 intron sr + chr3R 18126259 intron sr + chr3R 18126308 intron sr + chr3R_5_18125001 chr3R_18125001 RAL-153 530 chr3R 18322802 18322831 chr3R 18323439 18323468 4 638 12.0 14.5 13.2 0.3 666 chr3R 18322802 intron CG31235 - chr3R 18323135 intron CG31235 - chr3R 18323468 intron CG31235 - chr3R_4_18320001 chr3R_18320001 RAL-153 531 chr3R 18730031 18730036 chr3R 18730105 18730109 6 74 2.5 3.0 2.8 1.6 78 chr3R 18730031 intron Cha + chr3R 18730070 intron Cha + chr3R 18730109 exon Cha + chr3R_6_18730001 chr3R_18730001 RAL-153 532 chr3R 18826718 18826741 chr3R 18826922 18826946 5 204 2.5 2.5 2.5 1.4 228 chr3R 18826718 intron CG18208 - chr3R 18826832 intron CG18208 - chr3R 18826946 intron CG18208 - chr3R_5_18825001 chr3R_18825001 RAL-153 533 chr3R 19014114 19014122 chr3R 19014175 19014202 7 71 4.0 6.0 5.0 1.2 88 chr3R 19014114 intron gukh + chr3R 19014158 intron gukh + chr3R 19014202 intron gukh + chr3R_7_19010001 chr3R_19010001 RAL-153 534 chr3R 19144232 19144252 chr3R 19144315 19144335 5 83 1.5 2.0 1.8 1.8 103 chr3R 19144232 intron Ppcs - chr3R 19144284 intron Ppcs - chr3R 19144335 intron Ppcs - chr3R_5_19140001 chr3R_19140001 RAL-153 535 chr3R 20245284 20245301 chr3R 20248894 20248910 F-element 5 3610 2.5 0.0 1.2 2.3 3626 chr3R 20245284 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248910 intergenic not near genes chr3R_5_20245001 chr3R_20245001 RAL-153 536 chr3R 20266524 20266546 chr3R 20272995 20273015 Burdock 4 6470 2.0 1.0 1.5 1.6 6491 chr3R 20266524 intron cic + chr3R 20269770 intron cic + chr3R 20273015 intron cic + chr3R_4_20265001 chr3R_20265001 RAL-153 537 chr3R 20489024 20489036 chr3R 20489100 20489111 4 76 3.0 0.0 1.5 1.6 87 chr3R 20489024 intergenic not near genes chr3R 20489068 intergenic not near genes chr3R 20489111 intergenic not near genes chr3R_4_20485001 chr3R_20485001 RAL-153 538 chr3R 20870259 20870283 chr3R 20870334 20870357 4 80 0.5 0.5 0.5 2.7 98 chr3R 20870259 intergenic not near genes chr3R 20870308 intergenic not near genes chr3R 20870357 intergenic not near genes chr3R_4_20870001 chr3R_20870001 RAL-153 539 chr3R 20958390 20958417 chr3R 20958491 20958518 9 100 3.0 4.0 3.5 2.0 128 chr3R 20958390 intron Atpalpha + chr3R 20958454 intron Atpalpha + chr3R 20958518 intron Atpalpha + chr3R_9_20955001 chr3R_20955001 RAL-153 540 chr3R 21014009 21014040 chr3R 21014087 21014117 4 78 1.5 1.0 1.2 1.8 108 chr3R 21014009 3` UTR Calx + chr3R 21014063 3` UTR Calx + chr3R 21014117 3` UTR Calx + chr3R_4_21010001 chr3R_21010001 RAL-153 541 chr3R 21154549 21154585 chr3R 21154753 21154800 16 210 1.0 0.0 0.5 10.7 251 chr3R 21154549 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154800 intron SNF4Agamma + chr3R_16_21150001 chr3R_21150001 RAL-153 542 chr3R 21240449 21240471 chr3R 21240538 21240563 4 91 1.0 0.5 0.8 2.2 114 chr3R 21240449 intergenic not near genes chr3R 21240506 intergenic not near genes chr3R 21240563 intergenic not near genes chr3R_4_21240001 chr3R_21240001 RAL-153 543 chr3R 21388905 21388940 chr3R 21389000 21389028 13 94 2.5 4.5 3.5 2.9 123 chr3R 21388905 5` UTR bap + chr3R 21388966 5` UTR bap + chr3R 21389028 exon bap + chr3R_13_21385001 chr3R_21385001 RAL-153 544 chr3R 21519989 21520134 chr3R 21520090 21520220 6 93 0.0 0.0 0.0 6.0 231 chr3R 21519989 intergenic not near genes chr3R 21520104 intergenic not near genes chr3R 21520220 intergenic not near genes chr3R_6_21520001 chr3R_21520001 RAL-153 545 chr3R 21725673 21725690 chr3R 21725809 21725826 4 135 0.0 4.0 2.0 1.3 153 chr3R 21725673 intergenic not near genes chr3R 21725750 intergenic not near genes chr3R 21725826 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-153 546 chr3R 21761123 21761155 chr3R 21768509 21768520 mdg1 7 7382 1.5 4.0 2.8 1.8 7397 chr3R 21761123 exon CG42335 + chr3R 21764822 intron CG42335 + chr3R 21768520 exon CG42335 + chr3R_7_21760001 chr3R_21760001 RAL-153 547 chr3R 8339246 8339247 chr3R 21907534 21907534 4 13568288 8.5 10.5 9.5 0.4 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-153 548 chr3R 9620954 9620957 chr3R 21907534 21907534 7 12286578 8.0 10.5 9.2 0.7 12286580 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_7_15760001 chr3R_15760001 RAL-153 549 chr3R 13104419 13104420 chr3R 21907534 21907534 7 8803114 10.0 10.5 10.2 0.6 8803115 chr3R 13104419 intron timeout + chr3R 17505976 intergenic Dscam3 - chr3R 21907534 intergenic CG6678 + chr3R_7_17505001 chr3R_17505001 RAL-153 550 chr3R 21337428 21337429 chr3R 21907534 21907534 4 570105 4.0 10.5 7.2 0.5 570106 chr3R 21337428 intron CG16791 - chr3R 21622481 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_4_21620001 chr3R_21620001 RAL-153 551 chr3R 21907534 21907534 chr3R 28831799 28831804 57 6924268 12.5 11.5 12.0 4.4 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_57_25365001 chr3R_25365001 RAL-153 552 chr3R 8339246 8339247 chr3R 21907535 21907535 6 13568288 8.5 10.5 9.5 0.6 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-153 553 chr3R 9620956 9620956 chr3R 21907535 21907535 5 12286579 7.5 10.5 9.0 0.5 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-153 554 chr3R 17389054 17389054 chr3R 21907535 21907535 7 4518481 8.0 10.5 9.2 0.7 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_7_19645001 chr3R_19645001 RAL-153 555 chr3R 20177844 20177845 chr3R 21907535 21907535 5 1729690 0.5 10.5 5.5 0.8 1729691 chr3R 20177844 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_5_21040001 chr3R_21040001 RAL-153 556 chr3R 21907535 21907535 chr3R 28831801 28831804 99 6924266 12.5 12.5 12.5 7.3 6924269 chr3R 21907535 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831804 intron WASp - chr3R_99_25365001 chr3R_25365001 RAL-153 557 chr3R 21907535 21907535 chr3R 29013340 29013340 4 7105805 12.5 6.0 9.2 0.4 7105805 chr3R 21907535 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-153 558 chr3R 9620956 9620956 chr3R 21907536 21907536 4 12286580 7.5 10.5 9.0 0.4 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-153 559 chr3R 21907536 21907536 chr3R 28831799 28831802 81 6924266 12.5 11.5 12.0 6.2 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_81_25365001 chr3R_25365001 RAL-153 560 chr3R 21907536 21907536 chr3R 29013339 29013340 5 7105804 12.5 6.5 9.5 0.5 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_5_25460001 chr3R_25460001 RAL-153 561 chr3R 22369309 22369334 chr3R 22369379 22369406 8 73 2.5 5.5 4.0 1.6 97 chr3R 22369309 intron PyK + chr3R 22369358 intron PyK + chr3R 22369406 intron PyK + chr3R_8_22365001 chr3R_22365001 RAL-153 562 chr3R 22499832 22499841 chr3R 22499906 22499917 4 76 0.0 2.5 1.2 1.8 85 chr3R 22499832 intron Octbeta1R + chr3R 22499874 intron Octbeta1R + chr3R 22499917 intron Octbeta1R + chr3R_4_22495001 chr3R_22495001 RAL-153 563 chr3R 22526296 22526318 chr3R 22526377 22526399 5 81 1.0 0.0 0.5 3.3 103 chr3R 22526296 intron CG5346 - chr3R 22526348 intron CG5346 - chr3R 22526399 intron CG5346 - chr3R_5_22525001 chr3R_22525001 RAL-153 564 chr3R 22640373 22640392 chr3R 22640455 22640470 4 80 1.0 0.0 0.5 2.7 97 chr3R 22640373 intron wake + chr3R 22640422 intron wake + chr3R 22640470 intron wake + chr3R_4_22640001 chr3R_22640001 RAL-153 565 chr3R 22797770 22797915 chr3R 22797855 22798011 4 88 0.0 0.0 0.0 4.0 241 chr3R 22797770 intergenic not near genes chr3R 22797890 intergenic not near genes chr3R 22798011 intergenic not near genes chr3R_4_22795001 chr3R_22795001 RAL-153 566 chr3R 22927693 22927719 chr3R 22927777 22927780 5 77 0.0 2.5 1.2 2.3 87 chr3R 22927693 intron klg + chr3R 22927736 intron klg + chr3R 22927780 intron klg + chr3R_5_22925001 chr3R_22925001 RAL-153 567 chr3R 23064172 23064202 chr3R 23064281 23064311 17 105 6.0 6.0 6.0 2.4 139 chr3R 23064172 exon CG17111 - chr3R 23064242 intron CG17111 - chr3R 23064311 exon CG17111 - chr3R_17_23060001 chr3R_23060001 RAL-153 568 chr3R 23064876 23064892 chr3R 23064967 23064982 5 90 0.0 2.5 1.2 2.3 106 chr3R 23064876 intron CG17111 - chr3R 23064929 intron CG17111 - chr3R 23064982 intron CG17111 - chr3R_5_23060001 chr3R_23060001 RAL-153 569 chr3R 23064895 23064899 chr3R 23064966 23064990 4 82 0.0 2.5 1.2 1.8 95 chr3R 23064895 intron CG17111 - chr3R 23064942 intron CG17111 - chr3R 23064990 intron CG17111 - chr3R_4_23060001 chr3R_23060001 RAL-153 570 chr3R 23100163 23100439 chr3R 23100250 23100501 7 77 0.5 3.0 1.8 2.5 338 chr3R 23100163 intron,exon CG13830 -,CG6738 + chr3R 23100332 intron,exon CG13830 -,CG6738 + chr3R 23100501 intron,exon CG13830 -,CG6738 + chr3R_7_23100001 chr3R_23100001 RAL-153 571 chr3R 23575703 23575715 chr3R 23575791 23575800 7 87 0.0 3.0 1.5 2.8 97 chr3R 23575703 intron beat-IV + chr3R 23575752 intron beat-IV + chr3R 23575800 intron beat-IV + chr3R_7_23575001 chr3R_23575001 RAL-153 572 chr3R 23804348 23804364 chr3R 23804476 23804493 6 132 8.5 3.5 6.0 0.9 145 chr3R 23804348 intron,intron CG33111 -,CG34355 + chr3R 23804420 intron,intron CG33111 -,CG34355 + chr3R 23804493 intron,intron CG33111 -,CG34355 + chr3R_6_23800001 chr3R_23800001 RAL-153 573 chr3R 23893783 23893809 chr3R 23893880 23893905 8 97 2.0 2.5 2.2 2.5 122 chr3R 23893783 intergenic sba -,tbrd-1 - chr3R 23893844 intergenic sba -,tbrd-1 - chr3R 23893905 intergenic sba - chr3R_8_23890001 chr3R_23890001 RAL-153 574 chr3R 23944912 23944936 chr3R 23944996 23945018 6 84 4.0 3.0 3.5 1.3 106 chr3R 23944912 intron CG12268 - chr3R 23944965 intron CG12268 - chr3R 23945018 exon CG12268 - chr3R_6_23940001 chr3R_23940001 RAL-153 575 chr3R 23949042 23949063 chr3R 23949119 23949140 5 76 4.5 0.5 2.5 1.4 98 chr3R 23949042 intergenic not near genes chr3R 23949091 intergenic not near genes chr3R 23949140 intergenic not near genes chr3R_5_23945001 chr3R_23945001 RAL-153 576 chr3R 24072100 24072120 chr3R 24072527 24072534 jockey 4 427 3.0 5.0 4.0 0.8 434 chr3R 24072100 intron 4EHP - chr3R 24072317 intron 4EHP - chr3R 24072534 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-153 577 chr3R 24076914 24076944 chr3R 24078381 24078410 hobo 7 1465 4.0 2.0 3.0 1.8 1496 chr3R 24076914 intron 4EHP - chr3R 24077662 intron 4EHP - chr3R 24078410 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-153 578 chr3R 24116525 24116552 chr3R 24116819 24116846 5 287 2.5 2.0 2.2 1.6 321 chr3R 24116525 intron Rootletin + chr3R 24116686 intron Rootletin + chr3R 24116846 intron Rootletin + chr3R_5_24115001 chr3R_24115001 RAL-153 579 chr3R 24143998 24144026 chr3R 24144077 24144090 8 78 4.0 4.5 4.2 1.5 92 chr3R 24143998 intron Kal1 + chr3R 24144044 intron Kal1 + chr3R 24144090 intron Kal1 + chr3R_8_24140001 chr3R_24140001 RAL-153 580 chr3R 24199749 24199772 chr3R 24199829 24199836 4 74 0.5 3.0 1.8 1.4 87 chr3R 24199749 intron twin - chr3R 24199792 intron twin - chr3R 24199836 intron twin - chr3R_4_24195001 chr3R_24195001 RAL-153 581 chr3R 24291112 24291148 chr3R 24291201 24291222 7 80 2.0 2.5 2.2 2.2 110 chr3R 24291112 exon CG6364 + chr3R 24291167 intron CG6364 + chr3R 24291222 intron CG6364 + chr3R_7_24290001 chr3R_24290001 RAL-153 582 chr3R 24431603 24431615 chr3R 24431681 24431694 4 78 1.0 0.5 0.8 2.2 91 chr3R 24431603 intron nAChRalpha1 - chr3R 24431648 intron nAChRalpha1 - chr3R 24431694 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-153 583 chr3R 24434268 24434272 chr3R 24434344 24434349 4 77 0.5 5.5 3.0 1.0 81 chr3R 24434268 intron nAChRalpha1 - chr3R 24434308 intron nAChRalpha1 - chr3R 24434349 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-153 584 chr3R 24495291 24495319 chr3R 24495368 24495398 5 77 3.0 2.5 2.8 1.3 107 chr3R 24495291 intergenic not near genes chr3R 24495344 intergenic not near genes chr3R 24495398 intergenic not near genes chr3R_5_24495001 chr3R_24495001 RAL-153 585 chr3R 24730088 24730122 chr3R 24732466 24732484 Doc 12 2370 3.0 0.5 1.8 4.3 2396 chr3R 24730088 intron tok + chr3R 24731286 intron tok + chr3R 24732484 intron tok + chr3R_12_24730001 chr3R_24730001 RAL-153 586 chr3R 24789985 24790012 chr3R 24790129 24790155 10 144 3.0 2.0 2.5 2.9 170 chr3R 24789985 intron,5` UTR Ets96B +,CG13634 - chr3R 24790070 intron,5` UTR Ets96B +,CG13634 - chr3R 24790155 intron Ets96B + chr3R_10_24790001 chr3R_24790001 RAL-153 587 chr3R 24927131 24927145 chr3R 24931921 24931935 Doc 4 4790 3.5 2.0 2.8 1.1 4804 chr3R 24927131 intergenic Trf4-2 + chr3R 24929533 intergenic not near genes chr3R 24931935 intergenic CG11771 + chr3R_4_24925001 chr3R_24925001 RAL-153 588 chr3R 25027544 25027568 chr3R 25027749 25027780 7 209 4.5 2.5 3.5 1.6 236 chr3R 25027544 intron Hr96 + chr3R 25027662 intron Hr96 + chr3R 25027780 intron Hr96 + chr3R_7_25025001 chr3R_25025001 RAL-153 589 chr3R 25136398 25136427 chr3R 25136478 25136501 5 79 0.0 0.5 0.2 4.2 103 chr3R 25136398 3` UTR Bili + chr3R 25136450 3` UTR Bili + chr3R 25136501 3` UTR Bili + chr3R_5_25135001 chr3R_25135001 RAL-153 590 chr3R 25738636 25738656 chr3R 25738724 25738744 4 88 1.0 0.5 0.8 2.2 108 chr3R 25738636 intron LpR2 - chr3R 25738690 intron LpR2 - chr3R 25738744 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-153 591 chr3R 25761681 25761704 chr3R 25761761 25761783 6 74 2.5 3.5 3.0 1.5 102 chr3R 25761681 5` UTR LpR1 - chr3R 25761732 5` UTR LpR1 - chr3R 25761783 5` UTR LpR1 - chr3R_6_25760001 chr3R_25760001 RAL-153 592 chr3R 25832697 25832724 chr3R 25841878 25841903 roo 10 9179 2.0 5.5 3.8 2.1 9206 chr3R 25832697 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841903 exon alpha4GT2 + chr3R_10_25835001 chr3R_25835001 RAL-153 593 chr3R 25843638 25843663 chr3R 25843768 25843790 4 129 0.0 1.5 0.8 2.2 152 chr3R 25843638 intergenic CR45653 + chr3R 25843714 intergenic CR45653 + chr3R 25843790 intergenic CR45653 + chr3R_4_25840001 chr3R_25840001 RAL-153 594 chr3R 25846541 25846576 chr3R 25846619 25846655 5 78 0.0 2.0 1.0 2.5 114 chr3R 25846541 intergenic CR45654 +,CR45655 + chr3R 25846598 intergenic CR45655 +,CR45654 + chr3R 25846655 intergenic CR45655 +,CR45654 + chr3R_5_25845001 chr3R_25845001 RAL-153 595 chr3R 26235493 26235518 chr3R 26235571 26235599 9 80 1.5 2.0 1.8 3.2 106 chr3R 26235493 5` UTR CR42745 + chr3R 26235546 5` UTR CR42745 + chr3R 26235599 5` UTR CR42745 + chr3R_9_26235001 chr3R_26235001 RAL-153 596 chr3R 26252677 26252701 chr3R 26253043 26253068 6 367 5.0 5.0 5.0 1.0 391 chr3R 26252677 5` UTR CR42745 + chr3R 26252872 5` UTR CR42745 + chr3R 26253068 intergenic CR42745 + chr3R_6_26250001 chr3R_26250001 RAL-153 597 chr3R 26502965 26502991 chr3R 26503286 26503312 7 323 2.0 4.0 3.0 1.8 347 chr3R 26502965 intron plum - chr3R 26503138 intron plum - chr3R 26503312 intron plum - chr3R_7_26500001 chr3R_26500001 RAL-153 598 chr3R 26558349 26558355 chr3R 26565645 26565656 Stalker4 4 7304 2.5 3.5 3.0 1.0 7307 chr3R 26558349 intron scrib + chr3R 26562002 intron scrib + chr3R 26565656 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-153 599 chr3R 21907536 21907536 chr3R 26659332 26659337 4 4751800 12.5 9.5 11.0 0.3 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-153 600 chr3R 26845573 26845605 chr3R 26845653 26845681 5 79 1.0 2.5 1.8 1.8 108 chr3R 26845573 intron Lerp - chr3R 26845627 intron Lerp - chr3R 26845681 intron Lerp - chr3R_5_26845001 chr3R_26845001 RAL-153 601 chr3R 27028728 27028756 chr3R 27028807 27028835 4 78 2.0 1.5 1.8 1.4 107 chr3R 27028728 intron RYa-R + chr3R 27028782 intron RYa-R + chr3R 27028835 intron RYa-R + chr3R_4_27025001 chr3R_27025001 RAL-153 602 chr3R 27030221 27030249 chr3R 27030350 27030378 10 126 3.0 0.5 1.8 3.6 157 chr3R 27030221 intron RYa-R + chr3R 27030300 intron RYa-R + chr3R 27030378 intron RYa-R + chr3R_10_27030001 chr3R_27030001 RAL-153 603 chr3R 27140516 27140547 chr3R 27148125 27148156 412 11 7610 3.5 2.0 2.8 2.9 7640 chr3R 27140516 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148156 intron CG6051 - chr3R_11_27140001 chr3R_27140001 RAL-153 604 chr3R 27342804 27342826 chr3R 27351381 27351405 Tirant 10 8579 1.0 2.0 1.5 4.0 8601 chr3R 27342804 intron CG42534 + chr3R 27347104 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_10_27345001 chr3R_27345001 RAL-153 605 chr3R 27449183 27449187 chr3R 27449262 27449265 4 78 2.5 2.5 2.5 1.1 82 chr3R 27449183 intergenic not near genes chr3R 27449224 intergenic not near genes chr3R 27449265 intergenic not near genes chr3R_4_27445001 chr3R_27445001 RAL-153 606 chr3R 27521158 27521187 chr3R 27530367 27530395 roo 6 9208 0.5 2.0 1.2 2.7 9237 chr3R 27521158 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530395 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-153 607 chr3R 27648608 27648870 chr3R 27648676 27648944 17 73 4.5 0.0 2.2 5.3 336 chr3R 27648608 intron tau - chr3R 27648776 intron tau - chr3R 27648944 intron tau - chr3R_17_27645001 chr3R_27645001 RAL-153 608 chr3R 27679943 27679972 chr3R 27680059 27680094 13 119 6.5 5.0 5.8 1.9 151 chr3R 27679943 exon CG12883 + chr3R 27680018 3` UTR CG12883 + chr3R 27680094 3` UTR CG12883 + chr3R_13_27680001 chr3R_27680001 RAL-153 609 chr3R 27705360 27705387 chr3R 27705439 27705467 4 73 4.0 4.0 4.0 0.8 107 chr3R 27705360 exon CG12428 - chr3R 27705414 intron CG12428 - chr3R 27705467 exon CG12428 - chr3R_4_27705001 chr3R_27705001 RAL-153 610 chr3R 27731199 27731223 chr3R 27731279 27731281 5 76 2.5 2.5 2.5 1.4 82 chr3R 27731199 intergenic not near genes chr3R 27731240 intergenic not near genes chr3R 27731281 intergenic not near genes chr3R_5_27730001 chr3R_27730001 RAL-153 611 chr3R 27779282 27779286 chr3R 27779355 27779360 4 74 10.0 5.5 7.8 0.5 78 chr3R 27779282 exon CG34353 - chr3R 27779321 intron CG34353 - chr3R 27779360 intron CG34353 - chr3R_4_27775001 chr3R_27775001 RAL-153 612 chr3R 28054448 28054473 chr3R 28054519 28054549 10 74 3.5 2.0 2.8 2.6 101 chr3R 28054448 intron CG34362 + chr3R 28054498 intron CG34362 + chr3R 28054549 intron CG34362 + chr3R_10_28050001 chr3R_28050001 RAL-153 613 chr3R 28068508 28068528 chr3R 28073950 28073969 I-element 4 5441 0.5 2.5 1.5 1.6 5461 chr3R 28068508 intron CG34362 + chr3R 28071238 intron CG34362 + chr3R 28073969 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-153 614 chr3R 28253345 28253371 chr3R 28255848 28255881 jockey 9 2505 1.0 1.0 1.0 4.5 2536 chr3R 28253345 intergenic not near genes chr3R 28254613 intergenic not near genes chr3R 28255881 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-153 615 chr3R 28425198 28425213 chr3R 28425276 28425287 4 76 1.0 1.0 1.0 2.0 89 chr3R 28425198 intron beat-VI + chr3R 28425242 intron beat-VI + chr3R 28425287 intron beat-VI + chr3R_4_28425001 chr3R_28425001 RAL-153 616 chr3R 28445606 28445639 chr3R 28445695 28445728 5 81 1.0 3.0 2.0 1.7 122 chr3R 28445606 intron beat-VI + chr3R 28445667 intron beat-VI + chr3R 28445728 intron beat-VI + chr3R_5_28445001 chr3R_28445001 RAL-153 617 chr3R 28455032 28455059 chr3R 28455292 28455317 4 258 2.5 3.0 2.8 1.1 285 chr3R 28455032 intron beat-VI + chr3R 28455174 intron beat-VI + chr3R 28455317 intron beat-VI + chr3R_4_28455001 chr3R_28455001 RAL-153 618 chr3R 28633195 28633216 chr3R 28633274 28633295 5 77 0.0 0.5 0.2 4.2 100 chr3R 28633195 intron CG10011 - chr3R 28633245 intron CG10011 - chr3R 28633295 intron CG10011 - chr3R_5_28630001 chr3R_28630001 RAL-153 619 chr3R 28763902 28763916 chr3R 28771345 28771359 Stalker4 4 7443 0.0 0.5 0.2 3.3 7457 chr3R 28763902 intergenic not near genes chr3R 28767630 intergenic not near genes chr3R 28771359 intergenic not near genes chr3R_4_28765001 chr3R_28765001 RAL-153 620 chr3R 21907534 21907536 chr3R 28831798 28831802 86 6924266 12.5 11.5 12.0 6.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_86_25365001 chr3R_25365001 RAL-153 621 chr3R 29054025 29054040 chr3R 29054100 29054116 4 75 2.5 1.0 1.8 1.4 91 chr3R 29054025 intergenic CG11842 +,CG11843 + chr3R 29054070 intergenic CG11842 +,CG11843 + chr3R 29054116 intergenic CG11842 +,CG11843 + chr3R_4_29050001 chr3R_29050001 RAL-153 622 chr3R 29319825 29319853 chr3R 29320144 29320172 jockey 5 318 1.0 2.0 1.5 2.0 347 chr3R 29319825 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320172 intergenic not near genes chr3R_5_29315001 chr3R_29315001 RAL-153 623 chr3R 29333877 29333902 chr3R 29334004 29334029 6 126 0.5 1.0 0.8 3.3 152 chr3R 29333877 intergenic not near genes chr3R 29333953 intergenic not near genes chr3R 29334029 intergenic not near genes chr3R_6_29330001 chr3R_29330001 RAL-153 624 chr3R 29406625 29406643 chr3R 29407904 29407928 jockey 6 1280 4.0 3.0 3.5 1.3 1303 chr3R 29406625 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407928 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-153 625 chr3R 29718148 29718176 chr3R 29718224 29718252 8 75 2.0 0.5 1.2 3.6 104 chr3R 29718148 intergenic not near genes chr3R 29718200 intergenic CG15506 + chr3R 29718252 intergenic CG15506 + chr3R_8_29715001 chr3R_29715001 RAL-153 626 chr3R 29923641 29923667 chr3R 29925246 29925272 6 1606 12.5 17.5 15.0 0.4 1631 chr3R 29923641 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924456 exon Jon99Cii - chr3R 29925272 3` UTR Jon99Ci - chr3R_6_29920001 chr3R_29920001 RAL-153 627 chr3R 30032164 30032193 chr3R 30032242 30032259 4 70 3.0 3.0 3.0 1.0 95 chr3R 30032164 intron Axn + chr3R 30032212 intron Axn + chr3R 30032259 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-153 628 chr3R 30105042 30105058 chr3R 30105131 30105148 7 89 0.0 0.5 0.2 5.8 106 chr3R 30105042 intron sima + chr3R 30105095 intron sima + chr3R 30105148 intron sima + chr3R_7_30105001 chr3R_30105001 RAL-153 629 chr3R 30112955 30112986 chr3R 30113031 30113062 11 75 2.0 2.5 2.2 3.4 107 chr3R 30112955 intron sima + chr3R 30113008 intron sima + chr3R 30113062 intron sima + chr3R_11_30110001 chr3R_30110001 RAL-153 630 chr3R 30170765 30170791 chr3R 30170851 30170878 4 87 2.5 1.5 2.0 1.3 113 chr3R 30170765 intron CG31028 - chr3R 30170822 intron CG31028 - chr3R 30170878 intron CG31028 - chr3R_4_30170001 chr3R_30170001 RAL-153 631 chr3R 30181099 30181132 chr3R 30181176 30181207 4 70 3.5 1.0 2.2 1.2 108 chr3R 30181099 3` UTR Bet5 + chr3R 30181153 3` UTR Bet5 + chr3R 30181207 3` UTR Bet5 + chr3R_4_30180001 chr3R_30180001 RAL-153 632 chr3R 30238765 30238794 chr3R 30239929 30239958 1360 8 1164 2.0 0.5 1.2 3.6 1193 chr3R 30238765 intergenic not near genes chr3R 30239362 intergenic not near genes chr3R 30239958 intergenic not near genes chr3R_8_30235001 chr3R_30235001 RAL-153 633 chr3R 30332036 30332049 chr3R 30332108 30332128 5 76 2.0 2.0 2.0 1.7 92 chr3R 30332036 intron hdc + chr3R 30332082 intron hdc + chr3R 30332128 intron hdc + chr3R_5_30330001 chr3R_30330001 RAL-153 634 chr3R 30396224 30396247 chr3R 30404490 30404511 roo 6 8264 1.0 5.0 3.0 1.5 8287 chr3R 30396224 intergenic not near genes chr3R 30400368 intergenic not near genes chr3R 30404511 5` UTR CR45570 + chr3R_6_30400001 chr3R_30400001 RAL-153 635 chr3R 30461507 30461521 chr3R 30461614 30461638 7 115 0.5 1.0 0.8 3.9 131 chr3R 30461507 intron CDase + chr3R 30461572 intron CDase + chr3R 30461638 intron CDase + chr3R_7_30460001 chr3R_30460001 RAL-153 636 chr3R 30480481 30480508 chr3R 30482948 30482975 jockey 10 2466 1.0 4.5 2.8 2.6 2494 chr3R 30480481 intron PH4alphaEFB + chr3R 30481728 intron PH4alphaEFB + chr3R 30482975 intron PH4alphaEFB + chr3R_10_30480001 chr3R_30480001 RAL-153 637 chr3R 30485044 30485070 chr3R 30485120 30485145 9 75 1.0 2.5 1.8 3.2 101 chr3R 30485044 intron PH4alphaEFB + chr3R 30485094 intron PH4alphaEFB + chr3R 30485145 intron PH4alphaEFB + chr3R_9_30485001 chr3R_30485001 RAL-153 638 chr3R 30761461 30761485 chr3R 30761543 30761565 4 81 1.0 2.5 1.8 1.4 104 chr3R 30761461 intergenic not near genes chr3R 30761513 intergenic not near genes chr3R 30761565 intergenic not near genes chr3R_4_30760001 chr3R_30760001 RAL-153 639 chr3R 30818815 30818845 chr3R 30820380 30820403 1360 7 1560 4.5 0.0 2.2 2.2 1588 chr3R 30818815 intron cindr + chr3R 30819609 intron cindr + chr3R 30820403 intron cindr + chr3R_7_30815001 chr3R_30815001 RAL-153 640 chr3R 30865818 30865850 chr3R 30865975 30865995 4 149 1.5 2.0 1.8 1.4 177 chr3R 30865818 intergenic not near genes chr3R 30865906 intergenic not near genes chr3R 30865995 intergenic not near genes chr3R_4_30865001 chr3R_30865001 RAL-153 641 chr3R 30948081 30948105 chr3R 30948267 30948295 6 188 1.5 2.0 1.8 2.1 214 chr3R 30948081 intergenic not near genes chr3R 30948188 intergenic not near genes chr3R 30948295 intergenic not near genes chr3R_6_30945001 chr3R_30945001 RAL-153 642 chr3R 30973135 30973167 chr3R 30973295 30973326 4 156 0.0 0.5 0.2 3.3 191 chr3R 30973135 intron 5-HT7 - chr3R 30973230 intron 5-HT7 - chr3R 30973326 intron 5-HT7 - chr3R_4_30970001 chr3R_30970001 RAL-153 643 chr3R 31435361 31435391 chr3R 31435513 31435542 9 152 1.5 2.5 2.0 3.0 181 chr3R 31435361 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435542 intron Gprk2 + chr3R_9_31435001 chr3R_31435001 RAL-153 644 chr3R 31442281 31442297 chr3R 31442364 31442382 4 83 1.5 4.0 2.8 1.1 101 chr3R 31442281 intron Gprk2 + chr3R 31442332 intron Gprk2 + chr3R 31442382 intron Gprk2 + chr3R_4_31440001 chr3R_31440001 RAL-153 645 chr3R 31691557 31691564 chr3R 31696301 31696330 Doc 4 4760 4.0 4.5 4.2 0.8 4773 chr3R 31691557 intergenic not near genes chr3R 31693944 intergenic not near genes chr3R 31696330 intergenic not near genes chr3R_4_31690001 chr3R_31690001 RAL-153 646 chr3R 31699734 31699750 chr3R 31699811 31699831 4 78 1.0 1.0 1.0 2.0 97 chr3R 31699734 intergenic not near genes chr3R 31699782 intergenic not near genes chr3R 31699831 intergenic not near genes chr3R_4_31695001 chr3R_31695001 RAL-153 647 chr3R 31911698 31911709 chr3R 31911784 31911790 4 84 0.5 1.0 0.8 2.2 92 chr3R 31911698 intron heph - chr3R 31911744 intron heph - chr3R 31911790 intron heph - chr3R_4_31910001 chr3R_31910001 RAL-153 648 chr3R 31931197 31931216 chr3R 31931279 31931299 4 82 3.5 4.5 4.0 0.8 102 chr3R 31931197 intron heph - chr3R 31931248 intron heph - chr3R 31931299 intron heph - chr3R_4_31930001 chr3R_31930001 RAL-153 649 chrX 802301 802316 chrX 802366 802384 6 72 3.5 3.0 3.2 1.4 83 chrX 802301 exon CG13359 - chrX 802342 exon CG13359 - chrX 802384 exon CG13359 - chrX_6_800001 chrX_800001 RAL-153 650 chrX 1053117 1053120 chrX 16983076 16983077 13 15929958 8.5 2.0 5.2 2.1 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_13_9015001 chrX_9015001 RAL-153 651 chrX 1253747 1253762 chrX 1253812 1253837 4 76 1.0 2.5 1.8 1.4 90 chrX 1253747 intron Atf3 - chrX 1253792 intron Atf3 - chrX 1253837 intron Atf3 - chrX_4_1250001 chrX_1250001 RAL-153 652 chrX 1357777 1357804 chrX 1367947 1367974 Doc 7 10168 4.5 3.5 4.0 1.4 10197 chrX 1357777 intergenic png - chrX 1362876 intergenic not near genes chrX 1367974 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-153 653 chrX 1497329 1497352 chrX 1497401 1497401 7 71 3.5 1.5 2.5 2.0 72 chrX 1497329 intron,intron inc +,Nmdar2 - chrX 1497365 intron,intron inc +,Nmdar2 - chrX 1497401 intron,intron inc +,Nmdar2 - chrX_7_1495001 chrX_1495001 RAL-153 654 chrX 1499992 1500021 chrX 1500079 1500106 7 85 2.5 1.5 2.0 2.3 114 chrX 1499992 intron,intron inc +,Nmdar2 - chrX 1500049 intron,intron inc +,Nmdar2 - chrX 1500106 intron,intron inc +,Nmdar2 - chrX_7_1500001 chrX_1500001 RAL-153 655 chrX 1627974 1628000 chrX 1635442 1635468 gtwin 10 7466 3.5 5.0 4.2 1.9 7494 chrX 1627974 intron,intron Mur2B -,br + chrX 1631721 intron,intron Mur2B -,br + chrX 1635468 intron,intron Mur2B -,br + chrX_10_1630001 chrX_1630001 RAL-153 656 chrX 1954895 1954912 chrX 1962835 1962850 Stalker2 4 7940 3.0 5.0 4.0 0.8 7955 chrX 1954895 intron Hr4 + chrX 1958872 intron Hr4 + chrX 1962850 intron Hr4 + chrX_4_1955001 chrX_1955001 RAL-153 657 chrX 1974268 1974278 chrX 1974357 1974369 6 90 2.5 4.0 3.2 1.4 101 chrX 1974268 intron Hr4 + chrX 1974318 intron Hr4 + chrX 1974369 intron Hr4 + chrX_6_1970001 chrX_1970001 RAL-153 658 chrX 2069366 2069401 chrX 2069466 2069500 5 99 2.0 1.0 1.5 2.0 134 chrX 2069366 intron,exon CG4199 -,CG4194 + chrX 2069433 intron,3` UTR CG4199 -,CG4194 + chrX 2069500 intron,3` UTR CG4199 -,CG4194 + chrX_5_2065001 chrX_2065001 RAL-153 659 chrX 2146655 2146682 chrX 2146746 2146758 7 85 2.5 4.5 3.5 1.6 103 chrX 2146655 intron Pgd + chrX 2146706 intron Pgd + chrX 2146758 intron Pgd + chrX_7_2145001 chrX_2145001 RAL-153 660 chrX 2399839 2399871 chrX 2408189 2408207 roo 4 8344 6.0 0.0 3.0 1.0 8368 chrX 2399839 intergenic not near genes chrX 2404023 intergenic not near genes chrX 2408207 intergenic not near genes chrX_4_2400001 chrX_2400001 RAL-153 661 chrX 2610384 2610393 chrX 2617501 2617510 HMS-Beagle 4 7117 8.0 0.5 4.2 0.8 7126 chrX 2610384 intergenic CG8636 - chrX 2613947 intergenic not near genes chrX 2617510 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-153 662 chrX 2635394 2635402 chrX 2635481 2635511 7 105 1.0 2.5 1.8 2.5 117 chrX 2635394 intron sgg + chrX 2635452 intron sgg + chrX 2635511 intron sgg + chrX_7_2635001 chrX_2635001 RAL-153 663 chrX 2803499 2803521 chrX 2803641 2803664 8 143 2.5 2.5 2.5 2.3 165 chrX 2803499 intron kirre + chrX 2803582 intron kirre + chrX 2803664 intron kirre + chrX_8_2800001 chrX_2800001 RAL-153 664 chrX 2888119 2888144 chrX 2888197 2888213 4 76 2.5 0.5 1.5 1.6 94 chrX 2888119 intron kirre + chrX 2888166 intron kirre + chrX 2888213 intron kirre + chrX_4_2885001 chrX_2885001 RAL-153 665 chrX 3334327 3334336 chrX 3334405 3334412 4 78 2.0 0.5 1.2 1.8 85 chrX 3334327 exon,intron dnc +,CR44886 - chrX 3334370 intron,intron dnc +,CR44886 - chrX 3334412 intron,intron dnc +,CR44886 - chrX_4_3330001 chrX_3330001 RAL-153 666 chrX 3415021 3415045 chrX 3421206 3421229 3S18 4 6184 0.5 0.5 0.5 2.7 6208 chrX 3415021 intron,intron CR44999 +,CG12535 - chrX 3418125 intron,intron CR44999 +,CG12535 - chrX 3421229 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-153 667 chrX 3881272 3881283 chrX 3881411 3881422 4 139 2.0 1.5 1.8 1.4 150 chrX 3881272 intron VhaAC39-1 + chrX 3881347 intron VhaAC39-1 + chrX 3881422 intron VhaAC39-1 + chrX_4_3880001 chrX_3880001 RAL-153 668 chrX 3986864 3986893 chrX 3994496 3994525 412 9 7630 1.0 1.0 1.0 4.5 7661 chrX 3986864 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994525 intergenic not near genes chrX_9_3990001 chrX_3990001 RAL-153 669 chrX 4047490 4047502 chrX 4047602 4047612 4 110 1.5 0.0 0.8 2.2 122 chrX 4047490 intergenic CR45482 - chrX 4047551 intergenic CR45482 - chrX 4047612 3` UTR CR45482 - chrX_4_4045001 chrX_4045001 RAL-153 670 chrX 4115210 4115219 chrX 4115289 4115298 4 79 5.5 3.5 4.5 0.7 88 chrX 4115210 exon Tip60 - chrX 4115254 intron Tip60 - chrX 4115298 intron Tip60 - chrX_4_4115001 chrX_4115001 RAL-153 671 chrX 4171956 4171981 chrX 4172072 4172097 8 115 2.5 3.0 2.8 2.1 141 chrX 4171956 intron Fas2 - chrX 4172026 intron Fas2 - chrX 4172097 intron Fas2 - chrX_8_4170001 chrX_4170001 RAL-153 672 chrX 4396993 4397011 chrX 4397078 4397080 4 79 1.0 3.0 2.0 1.3 87 chrX 4396993 intron CR32773 - chrX 4397036 intron CR32773 - chrX 4397080 intron CR32773 - chrX_4_4395001 chrX_4395001 RAL-153 673 chrX 5096292 5096305 chrX 5103838 5103870 springer 5 7561 1.5 1.0 1.2 2.3 7578 chrX 5096292 intron,intron CG15465 +,rg + chrX 5100081 intron,intron CG15465 +,rg + chrX 5103870 intron,intron CG15465 +,rg + chrX_5_5100001 chrX_5100001 RAL-153 674 chrX 5478383 5478408 chrX 5478470 5478481 4 84 0.5 1.0 0.8 2.2 98 chrX 5478383 intron SPR + chrX 5478432 intron SPR + chrX 5478481 intron SPR + chrX_4_5475001 chrX_5475001 RAL-153 675 chrX 5524839 5524873 chrX 5528702 5528735 412 4 3862 3.0 1.0 2.0 1.3 3896 chrX 5524839 intergenic snoRNA:Psi28S-3342 - chrX 5526787 intergenic not near genes chrX 5528735 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-153 676 chrX 5786578 5786599 chrX 5786660 5786679 5 82 2.5 2.0 2.2 1.6 101 chrX 5786578 intron CG42699 + chrX 5786628 intron CG42699 + chrX 5786679 intron CG42699 + chrX_5_5785001 chrX_5785001 RAL-153 677 chrX 5883812 5883841 chrX 5884052 5884082 pogo 5 240 1.0 2.0 1.5 2.0 270 chrX 5883812 intron CR45668 - chrX 5883947 intron CR45668 - chrX 5884082 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-153 678 chrX 5884162 5884178 chrX 5884403 5884419 pogo 4 241 3.0 1.5 2.2 1.2 257 chrX 5884162 intron CR45668 - chrX 5884290 intron CR45668 - chrX 5884419 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-153 679 chrX 6003282 6003311 chrX 6003362 6003390 4 79 0.5 1.0 0.8 2.2 108 chrX 6003282 intron CR44498 + chrX 6003336 intron CR44498 + chrX 6003390 intron CR44498 + chrX_4_6000001 chrX_6000001 RAL-153 680 chrX 6215349 6215372 chrX 6215431 6215455 4 83 0.5 5.0 2.8 1.1 106 chrX 6215349 intergenic not near genes chrX 6215402 intergenic not near genes chrX 6215455 intergenic not near genes chrX_4_6215001 chrX_6215001 RAL-153 681 chrX 6309441 6309454 chrX 6309552 6309566 5 108 0.0 2.5 1.2 2.3 125 chrX 6309441 5` UTR CG15894 + chrX 6309504 intron CG15894 + chrX 6309566 intron CG15894 + chrX_5_6305001 chrX_6305001 RAL-153 682 chrX 6335218 6335242 chrX 6337728 6337751 Tirant 6 2509 0.0 2.0 1.0 3.0 2533 chrX 6335218 intergenic not near genes chrX 6336484 intergenic not near genes chrX 6337751 intergenic CG3842 + chrX_6_6335001 chrX_6335001 RAL-153 683 chrX 6388673 6388690 chrX 6388749 6388763 4 75 1.5 0.5 1.0 2.0 90 chrX 6388673 intergenic not near genes chrX 6388718 intergenic not near genes chrX 6388763 intergenic not near genes chrX_4_6385001 chrX_6385001 RAL-153 684 chrX 6562831 6562849 chrX 6571308 6571329 Tirant 4 8480 1.0 2.5 1.8 1.4 8498 chrX 6562831 intron CG34417 + chrX 6567080 intron CG34417 + chrX 6571329 intron CG34417 + chrX_4_6565001 chrX_6565001 RAL-153 685 chrX 6681155 6681163 chrX 6683116 6683123 4 1958 21.5 19.5 20.5 0.2 1968 chrX 6681155 exon l(1)G0255 + chrX 6682139 intron CG4095 + chrX 6683123 exon CG4095 + chrX_4_6680001 chrX_6680001 RAL-153 686 chrX 6961689 6961707 chrX 6961764 6961784 6 77 0.5 0.0 0.2 5.0 95 chrX 6961689 intron,intron CG14431 +,CG32732 - chrX 6961736 intron,intron CG14431 +,CG32732 - chrX 6961784 intron,intron CG14431 +,CG32732 - chrX_6_6960001 chrX_6960001 RAL-153 687 chrX 7069815 7069828 chrX 7069895 7069906 6 79 1.0 4.5 2.8 1.6 91 chrX 7069815 5` UTR CG4607 + chrX 7069860 5` UTR CG4607 + chrX 7069906 5` UTR CG4607 + chrX_6_7065001 chrX_7065001 RAL-153 688 chrX 7294524 7294542 chrX 7294612 7294623 8 92 4.5 2.0 3.2 1.9 99 chrX 7294524 intron,intron CR44357 -,CG1677 - chrX 7294574 intron,intron CR44357 -,CG1677 - chrX 7294623 intron,intron CR44357 -,CG1677 - chrX_8_7290001 chrX_7290001 RAL-153 689 chrX 7322897 7322907 chrX 7322980 7322986 6 83 1.0 0.5 0.8 3.3 89 chrX 7322897 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322942 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322986 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_6_7320001 chrX_7320001 RAL-153 690 chrX 7702912 7702939 chrX 7703343 7703346 jockey 4 429 1.5 1.0 1.2 1.8 434 chrX 7702912 intron CHES-1-like - chrX 7703129 intron CHES-1-like - chrX 7703346 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-153 691 chrX 7832441 7832461 chrX 7832527 7832549 5 87 0.5 1.5 1.0 2.5 108 chrX 7832441 intron CG1402 + chrX 7832495 intron CG1402 + chrX 7832549 intron CG1402 + chrX_5_7830001 chrX_7830001 RAL-153 692 chrX 7995775 7995775 chrX 9845361 9845361 4 1849586 4.5 13.0 8.8 0.4 1849586 chrX 7995775 5` UTR Tbh + chrX 8920568 intron rdgA + chrX 9845361 intron CG32698 + chrX_4_8920001 chrX_8920001 RAL-153 693 chrX 8085575 8085597 chrX 8085658 8085681 6 84 7.0 1.0 4.0 1.2 106 chrX 8085575 intron,5` UTR CG2256 -,CR45535 + chrX 8085628 intron,5` UTR CG2256 -,CR45535 + chrX 8085681 intron,5` UTR CG2256 -,CR45535 + chrX_6_8085001 chrX_8085001 RAL-153 694 chrX 8605315 8605340 chrX 8605392 8605416 5 77 3.5 2.5 3.0 1.2 101 chrX 8605315 exon Caf1-180 - chrX 8605366 exon Caf1-180 - chrX 8605416 exon Caf1-180 - chrX_5_8605001 chrX_8605001 RAL-153 695 chrX 8922334 8922353 chrX 8922768 8922786 jockey 7 431 2.5 3.5 3.0 1.8 452 chrX 8922334 intron rdgA + chrX 8922560 intron rdgA + chrX 8922786 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-153 696 chrX 9118841 9118868 chrX 9119064 9119091 13 221 1.5 2.5 2.0 4.3 250 chrX 9118841 intergenic not near genes chrX 9118966 intergenic not near genes chrX 9119091 intergenic not near genes chrX_13_9115001 chrX_9115001 RAL-153 697 chrX 9473856 9473881 chrX 9474085 9474100 5 229 0.5 3.0 1.8 1.8 244 chrX 9473856 intron mgl - chrX 9473978 intron mgl - chrX 9474100 intron mgl - chrX_5_9470001 chrX_9470001 RAL-153 698 chrX 9508153 9508170 chrX 9509646 9509687 jockey 8 1514 3.5 3.5 3.5 1.8 1534 chrX 9508153 intron CG32700 - chrX 9508920 intron CG32700 - chrX 9509687 intron CG32700 - chrX_8_9505001 chrX_9505001 RAL-153 699 chrX 9575800 9575822 chrX 9576124 9576146 mdg3 4 323 0.5 2.0 1.2 1.8 346 chrX 9575800 intron,exon CG32699 -,CG42395 - chrX 9575973 intron,intron CG32699 -,CG42395 - chrX 9576146 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-153 700 chrX 10184252 10184261 chrX 10184532 10184547 4 284 0.5 0.5 0.5 2.7 295 chrX 10184252 intron,intron CR44894 -,CG43902 + chrX 10184400 intron,intron CR44894 -,CG43902 + chrX 10184547 intron,intron CR44894 -,CG43902 + chrX_4_10180001 chrX_10180001 RAL-153 701 chrX 10216847 10216852 chrX 10216927 10216931 5 80 7.0 11.5 9.2 0.5 84 chrX 10216847 3` UTR l(1)G0230 + chrX 10216889 3` UTR l(1)G0230 + chrX 10216931 3` UTR l(1)G0230 + chrX_5_10215001 chrX_10215001 RAL-153 702 chrX 11268564 11268593 chrX 11270057 11270084 hopper2 4 1492 0.0 2.0 1.0 2.0 1520 chrX 11268564 intron CG44422 - chrX 11269324 intron CG44422 - chrX 11270084 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-153 703 chrX 11279167 11279178 chrX 11279252 11279263 4 84 0.0 2.5 1.2 1.8 96 chrX 11279167 intron CG44422 - chrX 11279215 intron CG44422 - chrX 11279263 intron CG44422 - chrX_4_11275001 chrX_11275001 RAL-153 704 chrX 11312064 11312087 chrX 11319411 11319420 Stalker2 4 7345 2.5 0.5 1.5 1.6 7356 chrX 11312064 intergenic not near genes chrX 11315742 intergenic not near genes chrX 11319420 intergenic not near genes chrX_4_11315001 chrX_11315001 RAL-153 705 chrX 12038087 12038108 chrX 12038280 12038290 6 191 5.5 2.5 4.0 1.2 203 chrX 12038087 intergenic not near genes chrX 12038188 intergenic not near genes chrX 12038290 intergenic not near genes chrX_6_12035001 chrX_12035001 RAL-153 706 chrX 12272857 12272870 chrX 12272935 12272947 5 78 1.0 5.0 3.0 1.2 90 chrX 12272857 intron Ten-a + chrX 12272902 intron Ten-a + chrX 12272947 intron Ten-a + chrX_5_12270001 chrX_12270001 RAL-153 707 chrX 12465474 12465491 chrX 12465549 12465567 4 74 5.5 0.0 2.8 1.1 93 chrX 12465474 exon CG42258 + chrX 12465520 intron CG42258 + chrX 12465567 intron CG42258 + chrX_4_12465001 chrX_12465001 RAL-153 708 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 4 2701135 12.0 9.0 10.5 0.3 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_4_11195001 chrX_11195001 RAL-153 709 chrX 13161692 13161724 chrX 13161768 13161789 12 72 0.5 3.0 1.8 4.3 97 chrX 13161692 3` UTR CG12096 + chrX 13161740 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161789 3` UTR,3` UTR CG12096 +,CG34411 - chrX_12_13160001 chrX_13160001 RAL-153 710 chrX 13269202 13269227 chrX 13269278 13269303 5 76 1.0 0.0 0.5 3.3 101 chrX 13269202 intron HDAC4 - chrX 13269252 intron HDAC4 - chrX 13269303 intron HDAC4 - chrX_5_13265001 chrX_13265001 RAL-153 711 chrX 13369673 13369688 chrX 13369837 13369852 6 160 8.0 9.0 8.5 0.6 179 chrX 13369673 intron dmrt11E + chrX 13369762 intron dmrt11E + chrX 13369852 intron dmrt11E + chrX_6_13365001 chrX_13365001 RAL-153 712 chrX 13374836 13374861 chrX 13374916 13374941 4 80 2.0 0.5 1.2 1.8 105 chrX 13374836 intron CG1640 + chrX 13374888 intron CG1640 + chrX 13374941 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-153 713 chrX 13409179 13409207 chrX 13409261 13409289 6 84 2.0 1.5 1.8 2.1 110 chrX 13409179 3` UTR GstT4 + chrX 13409234 3` UTR GstT4 + chrX 13409289 3` UTR GstT4 + chrX_6_13405001 chrX_13405001 RAL-153 714 chrX 13429464 13429493 chrX 13430611 13430642 jockey 4 1148 1.5 2.0 1.8 1.4 1178 chrX 13429464 intergenic not near genes chrX 13430053 intergenic not near genes chrX 13430642 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-153 715 chrX 13642887 13642900 chrX 13642961 13642979 4 77 1.0 2.5 1.8 1.4 92 chrX 13642887 intron NFAT + chrX 13642933 intron NFAT + chrX 13642979 intron NFAT + chrX_4_13640001 chrX_13640001 RAL-153 716 chrX 13875972 13875987 chrX 13876055 13876071 6 83 0.5 1.0 0.8 3.3 99 chrX 13875972 intron mamo - chrX 13876022 intron mamo - chrX 13876071 intron mamo - chrX_6_13875001 chrX_13875001 RAL-153 717 chrX 13937985 13938008 chrX 13941254 13941279 I-element 4 3270 2.0 2.5 2.2 1.2 3294 chrX 13937985 intron mamo - chrX 13939632 intron mamo - chrX 13941279 intron mamo - chrX_4_13935001 chrX_13935001 RAL-153 718 chrX 14185281 14185361 chrX 14185357 14185415 4 60 3.5 5.5 4.5 0.7 134 chrX 14185281 exon CG32603 + chrX 14185348 exon CG32603 + chrX 14185415 exon CG32603 + chrX_4_14185001 chrX_14185001 RAL-153 719 chrX 14188206 14188234 chrX 14188793 14188822 5 584 1.5 0.5 1.0 2.5 616 chrX 14188206 intergenic CG12481 + chrX 14188514 intergenic not near genes chrX 14188822 intergenic not near genes chrX_5_14185001 chrX_14185001 RAL-153 720 chrX 14936869 14936878 chrX 14946126 14946131 roo 5 9255 3.5 2.0 2.8 1.3 9262 chrX 14936869 intron pdgy - chrX 14941500 intron pdgy - chrX 14946131 intron pdgy - chrX_5_14940001 chrX_14940001 RAL-153 721 chrX 14952444 14952460 chrX 14952612 14952615 4 164 1.5 1.5 1.5 1.6 171 chrX 14952444 intron,3` UTR pdgy -,CR44831 - chrX 14952530 intron,3` UTR pdgy -,CR44831 - chrX 14952615 intron,3` UTR pdgy -,CR44831 - chrX_4_14950001 chrX_14950001 RAL-153 722 chrX 15413048 15413087 chrX 15417350 15417382 Juan 7 4298 1.5 2.5 2.0 2.3 4334 chrX 15413048 intron Cngl - chrX 15415215 intron Cngl - chrX 15417382 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-153 723 chrX 15678049 15678064 chrX 15678121 15678136 10 75 1.5 4.5 3.0 2.5 87 chrX 15678049 intergenic CG12708 + chrX 15678092 intergenic CG12708 + chrX 15678136 intergenic CG12708 + chrX_10_15675001 chrX_15675001 RAL-153 724 chrX 16329436 16329449 chrX 16329508 16329532 8 80 0.0 2.0 1.0 4.0 96 chrX 16329436 intron CG9919 - chrX 16329484 intron CG9919 - chrX 16329532 exon CG9919 - chrX_8_16325001 chrX_16325001 RAL-153 725 chrX 16476594 16476614 chrX 16476659 16476676 7 69 0.0 1.0 0.5 4.7 82 chrX 16476594 intron para - chrX 16476635 intron para - chrX 16476676 intron para - chrX_7_16475001 chrX_16475001 RAL-153 726 chrX 16650937 16650950 chrX 16651014 16651026 4 77 1.0 0.0 0.5 2.7 89 chrX 16650937 intergenic CG32573 +,CG42512 + chrX 16650982 intergenic CG32573 +,CG42512 + chrX 16651026 intergenic CG32573 +,CG42512 + chrX_4_16650001 chrX_16650001 RAL-153 727 chrX 16785278 16785305 chrX 16785382 16785408 8 103 1.5 3.0 2.2 2.5 130 chrX 16785278 3` UTR CG9609 - chrX 16785343 3` UTR CG9609 - chrX 16785408 3` UTR CG9609 - chrX_8_16785001 chrX_16785001 RAL-153 728 chrX 16936001 16936033 chrX 16936419 16936451 jockey 5 417 0.0 2.5 1.2 2.3 450 chrX 16936001 intron CG4928 + chrX 16936226 intron CG4928 + chrX 16936451 intron CG4928 + chrX_5_16935001 chrX_16935001 RAL-153 729 chrX 16951324 16951356 chrX 16951400 16951424 15 73 4.0 5.0 4.5 2.7 100 chrX 16951324 exon RhoGAP15B + chrX 16951374 exon RhoGAP15B + chrX 16951424 exon RhoGAP15B + chrX_15_16950001 chrX_16950001 RAL-153 730 chrX 1053118 1053123 chrX 16983076 16983076 6 15929956 8.5 2.0 5.2 1.0 15929958 chrX 1053118 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_6_9015001 chrX_9015001 RAL-153 731 chrX 16983076 16983076 chrX 19404963 19404971 4 2421889 2.0 1.5 1.8 1.4 2421895 chrX 16983076 intron CG45002 - chrX 18194024 intron Frq2 + chrX 19404971 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-153 732 chrX 17150794 17150820 chrX 17150945 17150971 6 150 0.5 1.5 1.0 3.0 177 chrX 17150794 intergenic CG5010 +,xmas-1 - chrX 17150882 intergenic CG5010 +,xmas-1 - chrX 17150971 intergenic xmas-1 -,CG5010 + chrX_6_17150001 chrX_17150001 RAL-153 733 chrX 17316370 17316396 chrX 17316454 17316480 5 84 3.5 0.5 2.0 1.7 110 chrX 17316370 intron B-H2 + chrX 17316425 intron B-H2 + chrX 17316480 intron B-H2 + chrX_5_17315001 chrX_17315001 RAL-153 734 chrX 17427049 17427075 chrX 17427131 17427162 5 84 2.0 5.0 3.5 1.1 113 chrX 17427049 intron,intron CG12994 -,CG5613 + chrX 17427106 intron,intron CG12994 -,CG5613 + chrX 17427162 intron,intron CG12994 -,CG5613 + chrX_5_17425001 chrX_17425001 RAL-153 735 chrX 17708849 17708858 chrX 17708927 17708937 4 78 0.0 5.0 2.5 1.1 88 chrX 17708849 intron CG8173 - chrX 17708893 intron CG8173 - chrX 17708937 intron CG8173 - chrX_4_17705001 chrX_17705001 RAL-153 736 chrX 18122124 18122154 chrX 18122208 18122238 8 82 2.0 2.0 2.0 2.7 114 chrX 18122124 5` UTR CR45606 + chrX 18122181 5` UTR CR45606 + chrX 18122238 5` UTR CR45606 + chrX_8_18120001 chrX_18120001 RAL-153 737 chrX 18122823 18122849 chrX 18122898 18122925 11 74 2.5 3.0 2.8 2.9 102 chrX 18122823 5` UTR CR45606 + chrX 18122874 5` UTR CR45606 + chrX 18122925 intergenic CR45606 + chrX_11_18120001 chrX_18120001 RAL-153 738 chrX 18230521 18230524 chrX 18235208 18235229 5 4691 9.0 16.0 12.5 0.4 4708 chrX 18230521 intergenic not near genes chrX 18232875 intergenic not near genes chrX 18235229 intergenic not near genes chrX_5_18230001 chrX_18230001 RAL-153 739 chrX 18270057 18270063 chrX 18270145 18270151 4 88 3.0 3.0 3.0 1.0 94 chrX 18270057 intergenic not near genes chrX 18270104 intergenic not near genes chrX 18270151 intergenic not near genes chrX_4_18270001 chrX_18270001 RAL-153 740 chrX 18427386 18427402 chrX 18427794 18427813 4 410 2.5 0.5 1.5 1.6 427 chrX 18427386 intergenic CG42323 + chrX 18427600 intergenic not near genes chrX 18427813 intergenic not near genes chrX_4_18425001 chrX_18425001 RAL-153 741 chrX 18429508 18429521 chrX 18434818 18434832 Transpac 5 5311 1.0 4.0 2.5 1.4 5324 chrX 18429508 intergenic not near genes chrX 18432170 intergenic not near genes chrX 18434832 intergenic not near genes chrX_5_18430001 chrX_18430001 RAL-153 742 chrX 18512008 18512035 chrX 18512095 18512123 10 84 3.0 2.0 2.5 2.9 115 chrX 18512008 intron Ggt-1 - chrX 18512066 5` UTR Ggt-1 - chrX 18512123 5` UTR Ggt-1 - chrX_10_18510001 chrX_18510001 RAL-153 743 chrX 18645013 18645047 chrX 18645111 18645145 4 98 1.5 0.5 1.0 2.0 132 chrX 18645013 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645145 intron Rip11 - chrX_4_18645001 chrX_18645001 RAL-153 744 chrX 18896518 18896536 chrX 18896629 18896638 4 109 3.0 2.5 2.8 1.1 120 chrX 18896518 3` UTR CG7349 + chrX 18896578 3` UTR CG7349 + chrX 18896638 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-153 745 chrX 19020595 19020616 chrX 19020670 19020694 4 76 0.0 3.5 1.8 1.4 99 chrX 19020595 intron CG43759 + chrX 19020644 intron CG43759 + chrX 19020694 intron CG43759 + chrX_4_19020001 chrX_19020001 RAL-153 746 chrX 19060409 19060438 chrX 19065193 19065222 Doc 4 4784 1.5 1.0 1.2 1.8 4813 chrX 19060409 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065222 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-153 747 chrX 19080330 19080356 chrX 19080434 19080447 4 102 2.5 2.5 2.5 1.1 117 chrX 19080330 intergenic not near genes chrX 19080388 intergenic not near genes chrX 19080447 intergenic not near genes chrX_4_19080001 chrX_19080001 RAL-153 748 chrX 19083196 19083225 chrX 19083276 19083306 8 80 3.0 1.5 2.2 2.5 110 chrX 19083196 5` UTR CG7423 - chrX 19083251 5` UTR CG7423 - chrX 19083306 intergenic CG7423 -,CR45503 + chrX_8_19080001 chrX_19080001 RAL-153 749 chrX 19084103 19084119 chrX 19084221 19084230 5 118 0.5 2.0 1.2 2.3 127 chrX 19084103 intergenic CR45503 + chrX 19084166 intergenic CR45503 + chrX 19084230 intergenic CR45503 + chrX_5_19080001 chrX_19080001 RAL-153 750 chrX 19136553 19136585 chrX 19143472 19143501 412 7 6914 2.0 2.5 2.2 2.2 6948 chrX 19136553 intergenic not near genes chrX 19140027 intergenic not near genes chrX 19143501 3` UTR RhoGAP18B - chrX_7_19140001 chrX_19140001 RAL-153 751 chrX 19170595 19170601 chrX 19170668 19170677 5 75 11.5 9.0 10.2 0.4 82 chrX 19170595 5` UTR Inx5 - chrX 19170636 5` UTR Inx5 - chrX 19170677 5` UTR Inx5 - chrX_5_19170001 chrX_19170001 RAL-153 752 chrX 19231057 19231076 chrX 19231124 19231152 4 73 2.5 2.0 2.2 1.2 95 chrX 19231057 intron CG7884 + chrX 19231104 intron CG7884 + chrX 19231152 intron CG7884 + chrX_4_19230001 chrX_19230001 RAL-153 753 chrX 13057298 13057300 chrX 19242812 19242814 9 6185514 2.5 7.0 4.8 1.6 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_9_16150001 chrX_16150001 RAL-153 754 chrX 19472126 19472155 chrX 19472696 19472724 jockey 4 565 2.0 1.0 1.5 1.6 598 chrX 19472126 intergenic kek5 + chrX 19472425 intergenic not near genes chrX 19472724 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-153 755 chrX 19576559 19576592 chrX 19576637 19576638 15 75 4.0 3.0 3.5 3.3 79 chrX 19576559 intron Tao - chrX 19576598 intron Tao - chrX 19576638 intron Tao - chrX_15_19575001 chrX_19575001 RAL-153 756 chrX 19643947 19643958 chrX 19644853 19644878 6 914 29.0 49.0 39.0 0.1 931 chrX 19643947 exon Sec61gamma + chrX 19644412 3` UTR Sec61gamma + chrX 19644878 exon Arp10 - chrX_6_19640001 chrX_19640001 RAL-153 757 chrX 19693754 19693788 chrX 19693837 19693865 4 80 3.0 0.0 1.5 1.6 111 chrX 19693754 intergenic CG14229 -,Mer - chrX 19693810 intergenic CG14229 -,Mer - chrX 19693865 intergenic CG14229 -,Mer - chrX_4_19690001 chrX_19690001 RAL-153 758 chrX 19710074 19710103 chrX 19711859 19711877 S-element 11 1781 0.5 2.0 1.2 5.0 1803 chrX 19710074 intron meso18E - chrX 19710976 intron meso18E - chrX 19711877 intron meso18E - chrX_11_19710001 chrX_19710001 RAL-153 759 chrX 19762588 19762621 chrX 19762666 19762701 5 78 1.0 0.5 0.8 2.8 113 chrX 19762588 5` UTR CG12702 - chrX 19762644 5` UTR CG12702 - chrX 19762701 5` UTR CG12702 - chrX_5_19760001 chrX_19760001 RAL-153 760 chrX 20041534 20041564 chrX 20041613 20041644 7 77 1.0 2.0 1.5 2.8 110 chrX 20041534 intron Dop2R - chrX 20041589 intron Dop2R - chrX 20041644 intron Dop2R - chrX_7_20040001 chrX_20040001 RAL-153 761 chrX 20069265 20069285 chrX 20069398 20069417 5 130 2.5 1.0 1.8 1.8 152 chrX 20069265 intergenic not near genes chrX 20069341 intergenic not near genes chrX 20069417 intergenic not near genes chrX_5_20065001 chrX_20065001 RAL-153 762 chrX 20279754 20279764 chrX 20279835 20279845 4 81 2.0 1.5 1.8 1.4 91 chrX 20279754 intergenic not near genes chrX 20279800 intergenic not near genes chrX 20279845 intergenic not near genes chrX_4_20275001 chrX_20275001 RAL-153 763 chrX 20377330 20377345 chrX 20378797 20378811 hobo 4 1466 5.5 4.5 5.0 0.7 1481 chrX 20377330 intergenic not near genes chrX 20378070 intergenic not near genes chrX 20378811 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-153 764 chrX 20377347 20377350 chrX 20378787 20378817 hobo 4 1458 4.0 3.0 3.5 0.9 1470 chrX 20377347 intergenic not near genes chrX 20378082 intergenic not near genes chrX 20378817 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-153 765 chrX 20533726 20533750 chrX 20533799 20533826 5 75 0.5 1.5 1.0 2.5 100 chrX 20533726 intergenic not near genes chrX 20533776 intergenic not near genes chrX 20533826 intergenic not near genes chrX_5_20530001 chrX_20530001 RAL-153 766 chrX 20940720 20940755 chrX 20942186 20942207 hobo 7 1465 2.0 2.0 2.0 2.3 1487 chrX 20940720 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942207 intergenic not near genes chrX_7_20940001 chrX_20940001 RAL-153 767 chrX 21061862 21061884 chrX 21062347 21062369 roo 7 484 1.5 0.5 1.0 3.5 507 chrX 21061862 intron bves + chrX 21062116 intron bves + chrX 21062369 intron,3` UTR bves +,CG32512 - chrX_7_21060001 chrX_21060001 RAL-153 768 chrX 21088047 21088056 chrX 21088178 21088182 4 130 0.5 0.5 0.5 2.7 135 chrX 21088047 intergenic not near genes chrX 21088114 intergenic not near genes chrX 21088182 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-153 769 chrX 21241782 21241799 chrX 21241858 21241871 4 78 0.0 0.0 0.0 4.0 89 chrX 21241782 intron CG32521 - chrX 21241826 intron CG32521 - chrX 21241871 intron CG32521 - chrX_4_21240001 chrX_21240001 RAL-153 770 chrX 21328116 21328138 chrX 21328227 21328249 6 111 2.0 1.5 1.8 2.1 133 chrX 21328116 3` UTR CG1486 + chrX 21328182 intergenic CG1486 +,tty - chrX 21328249 intergenic CG1486 +,tty - chrX_6_21325001 chrX_21325001 RAL-153 771 chrX 21458693 21458724 chrX 21464129 21464158 Ivk 7 5435 2.5 5.0 3.8 1.5 5465 chrX 21458693 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464158 intergenic not near genes chrX_7_21460001 chrX_21460001 RAL-153 772 chrX 21565435 21565442 chrX 21565509 21565520 4 77 1.0 4.0 2.5 1.1 85 chrX 21565435 intergenic not near genes chrX 21565478 intergenic not near genes chrX 21565520 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-153 773 chrX 21668269 21668289 chrX 21668354 21668370 4 83 0.5 2.0 1.2 1.8 101 chrX 21668269 intergenic not near genes chrX 21668320 intergenic not near genes chrX 21668370 intergenic not near genes chrX_4_21665001 chrX_21665001 RAL-153 774 chrX 22697500 22697515 chrX 22701793 22701811 Juan 4 4296 0.5 0.0 0.2 3.3 4311 chrX 22697500 intron CR44997 + chrX 22699656 intron CR44997 + chrX 22701811 intron CR44997 + chrX_4_22695001 chrX_22695001 RAL-153 775 chrX 22763615 22763644 chrX 22763700 22763729 5 83 0.5 1.0 0.8 2.8 114 chrX 22763615 intron CR44997 + chrX 22763672 intron CR44997 + chrX 22763729 intron CR44997 + chrX_5_22760001 chrX_22760001 RAL-153 776 chrX 22987111 22987136 chrX 22989770 22989795 Burdock 4 2658 1.5 3.5 2.5 1.1 2684 chrX 22987111 intron,intron stnA -,stnB - chrX 22988453 intron,intron stnA -,stnB - chrX 22989795 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-153 777 chrX 22996316 22996340 chrX 23003549 23003573 roo 5 7233 0.5 2.5 1.5 2.0 7257 chrX 22996316 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003573 intron,intron stnA -,stnB - chrX_5_22995001 chrX_22995001 RAL-153