SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	493962	494072	roo	8666	402	9	110	'5-4	71.52	1.7	3.3	intron	ush +	chr2L_9_490001	chr2L_490001	0.56	RAL-142
2	chr2L	769952	770079	roo	402	8679	24	127	'17-7	63.27	5.9	3.5	intergenic	not near genes	chr2L_24_765001	chr2L_765001	0.71	RAL-142
3	chr2L	1291010	1291134	412	17	7537	28	124	'16-12	63.86	6.5	3.7	intron	robo3 +	chr2L_28_1290001	chr2L_1290001	0.57	RAL-142
4	chr2L	2484332	2484450	jockey	4685	4987	30	118	'16-14	60.52	6.8	3.8	intergenic	not near genes	chr2L_30_2480001	chr2L_2480001	0.53	RAL-142
5	chr2L	3138329	3138420	copia	4925	253	7	91	'1-6	67.62	0.5	4.7	intron	toc -	chr2L_7_3135001	chr2L_3135001	0.14	RAL-142
6	chr2L	3323200	3323324	hobo	2934	3	18	124	'3-15	60.44	5.7	2.7	intergenic	CG8837 +	chr2L_18_3320001	chr2L_3320001	0.17	RAL-142
7	chr2L	3907381	3907596	hobo	4	2789	4	215	'3-1	62.42	2.6	1.1	intron	fred -	chr2L_4_3905001	chr2L_3905001	0.75	RAL-142
8	chr2L	4012969	4013099	pogo	15	2097	11	130	'2-9	61.52	3.8	2.3	intergenic	not near genes	chr2L_11_4010001	chr2L_4010001	0.18	RAL-142
9	chr2L	4016854	4016956	opus	149	499	26	102	'15-11	67.63	3.7	5.5	intergenic	not near genes	chr2L_26_4015001	chr2L_4015001	0.58	RAL-142
10	chr2L	4670104	4670168	G2	118	182	10	64	'5-5	62.75	3.0	2.5	intergenic	not near genes	chr2L_10_4670001	chr2L_4670001	0.50	RAL-142
11	chr2L	4674703	4674773	I-element	5335	34	7	70	'2-5	72.54	4.7	1.2	intergenic	not near genes	chr2L_7_4670001	chr2L_4670001	0.29	RAL-142
12	chr2L	4916675	4916807	S-element	1708	1703	9	132	'3-6	68.70	3.7	1.9	intron	hoe1 -	chr2L_9_4915001	chr2L_4915001	0.33	RAL-142
13	chr2L	5304807	5304953	flea	4761	5013	26	146	'11-15	68.88	6.0	3.7	intron	vri +	chr2L_26_5300001	chr2L_5300001	0.42	RAL-142
14	chr2L	5338012	5338061	F-element	56	17	19	49	'12-7	63.61	6.7	2.5	5` UTR	fusl -	chr2L_19_5335001	chr2L_5335001	0.63	RAL-142
15	chr2L	5595503	5595577	Max-element	32	286	13	74	'7-6	63.33	4.1	2.5	intergenic	not near genes	chr2L_13_5595001	chr2L_5595001	0.54	RAL-142
16	chr2L	5724293	5724373	1360	3365	28	12	80	'7-5	68.47	0.0	12.0	intergenic	sip1 +,CG11030 +	chr2L_12_5720001	chr2L_5720001	0.58	RAL-142
17	chr2L	6243634	6243764	412	495	10	27	130	'8-19	62.47	4.6	4.8	intergenic	not near genes	chr2L_27_6240001	chr2L_6240001	0.30	RAL-142
18	chr2L	6311226	6311328	hopper	4	5	16	102	'9-7	65.11	5.6	2.4	intron	Ddr +	chr2L_16_6310001	chr2L_6310001	0.56	RAL-142
19	chr2L	6519789	6519882	diver	21	224	9	93	'7-2	63.38	5.0	1.5	intron	CG31637 +	chr2L_9_6515001	chr2L_6515001	0.78	RAL-142
20	chr2L	6757445	6757548	Tirant	8496	24	22	103	'16-6	64.87	4.1	4.3	intergenic	CG11322 -	chr2L_22_6755001	chr2L_6755001	0.73	RAL-142
21	chr2L	7088278	7088381	rover	343	28	10	103	'8-2	67.03	1.1	4.8	intergenic	not near genes	chr2L_10_7085001	chr2L_7085001	0.80	RAL-142
22	chr2L	7750503	7750634	opus	6	490	20	131	'11-9	56.31	4.4	3.7	intergenic	not near genes	chr2L_20_7750001	chr2L_7750001	0.55	RAL-142
23	chr2L	7841309	7841414	jockey	4981	7	12	105	'10-2	65.42	5.6	1.8	intergenic	CG14537 +	chr2L_12_7840001	chr2L_7840001	0.83	RAL-142
24	chr2L	8476738	8476803	Juan	4152	4215	25	65	'13-12	64.90	9.3	2.4	intron	d +	chr2L_25_8475001	chr2L_8475001	0.52	RAL-142
25	chr2L	9147938	9147983	Doc	1	59	15	45	'2-13	62.20	11.5	1.2	intron	CG32982 +	chr2L_15_9145001	chr2L_9145001	0.13	RAL-142
26	chr2L	9171393	9171528	opus	7496	7	32	135	'12-20	67.11	5.4	5.0	intron	tai +	chr2L_32_9170001	chr2L_9170001	0.38	RAL-142
27	chr2L	9488159	9488268	297	53	394	8	109	'1-7	54.84	0.6	5.0	intergenic	not near genes	chr2L_8_9485001	chr2L_9485001	0.12	RAL-142
28	chr2L	9496348	9496444	Tirant	402	12	9	96	'6-3	67.65	3.4	2.0	intron	CG33298 +	chr2L_9_9495001	chr2L_9495001	0.67	RAL-142
29	chr2L	9626850	9626959	hobo	2929	9	9	109	'3-6	64.98	5.3	1.4	intergenic	not near genes	chr2L_9_9625001	chr2L_9625001	0.33	RAL-142
30	chr2L	9754796	9754899	1360	3384	3386	30	103	'11-19	63.03	8.3	3.2	intergenic	not near genes	chr2L_30_9750001	chr2L_9750001	0.37	RAL-142
31	chr2L	10128589	10128774	copia	4938	258	18	185	'12-6	67.22	1.8	6.4	intron	CG44153 -	chr2L_18_10125001	chr2L_10125001	0.67	RAL-142
32	chr2L	10554337	10554389	G2	320	267	9	52	'4-5	68.16	4.8	1.6	intron	Trim9 +	chr2L_9_10550001	chr2L_10550001	0.44	RAL-142
33	chr2L	10746622	10746731	flea	4770	4985	17	109	'9-8	64.04	5.5	2.6	intron	CG17124 -	chr2L_17_10745001	chr2L_10745001	0.53	RAL-142
34	chr2L	10750068	10750121	X-element	4525	4558	14	53	'5-9	66.53	7.1	1.7	intron	CG17124 -	chr2L_14_10750001	chr2L_10750001	0.36	RAL-142
35	chr2L	10867592	10867701	ZAM	264	8227	4	109	'2-2	58.44	3.0	1.0	intergenic	not near genes	chr2L_4_10865001	chr2L_10865001	0.50	RAL-142
36	chr2L	11082292	11082346	jockey	62	9	7	54	'5-2	63.66	5.7	1.0	intergenic	not near genes	chr2L_7_11080001	chr2L_11080001	0.71	RAL-142
37	chr2L	11231822	11231928	copia	4893	249	6	106	'2-4	55.30	2.2	1.9	intron	ab +	chr2L_6_11230001	chr2L_11230001	0.33	RAL-142
38	chr2L	11762148	11762272	mdg1	7450	18	12	124	'8-4	65.53	2.2	3.8	intergenic	not near genes	chr2L_12_11760001	chr2L_11760001	0.67	RAL-142
39	chr2L	12036073	12036198	297	6591	378	20	125	'9-11	63.72	7.7	2.3	3` UTR,3` UTR	CG18788 +,Tom70 -	chr2L_20_12035001	chr2L_12035001	0.45	RAL-142
40	chr2L	12591698	12591823	roo	389	6	25	125	'12-13	65.35	3.0	6.2	intron	nub +	chr2L_25_12590001	chr2L_12590001	0.48	RAL-142
41	chr2L	12706681	12706833	hopper	155	153	4	152	'1-3	53.51	5.1	0.7	3` UTR	spict +	chr2L_4_12705001	chr2L_12705001	0.25	RAL-142
42	chr2L	12910673	12910810	Burdock	246	6142	25	137	'11-14	65.98	3.2	6.0	intergenic	not near genes	chr2L_25_12910001	chr2L_12910001	0.44	RAL-142
43	chr2L	13292923	13292975	X-element	4712	4660	12	52	'6-6	65.73	4.8	2.1	intron	CG31729 +	chr2L_12_13290001	chr2L_13290001	0.50	RAL-142
44	chr2L	13324535	13324600	jockey	4716	4780	14	65	'4-10	62.68	6.8	1.8	intron	CG43778 -	chr2L_14_13320001	chr2L_13320001	0.29	RAL-142
45	chr2L	13558158	13558246	FB	25	21	9	88	'2-7	58.72	4.3	1.7	intron	kuz +	chr2L_9_13555001	chr2L_13555001	0.22	RAL-142
46	chr2L	13710635	13710770	copia	254	3	27	135	'15-12	65.85	5.9	3.9	intron	CG31814 -	chr2L_27_13710001	chr2L_13710001	0.56	RAL-142
47	chr2L	13836475	13836588	blood	7014	7354	18	113	'13-5	64.53	5.4	2.8	intron	CenG1A +	chr2L_18_13835001	chr2L_13835001	0.72	RAL-142
48	chr2L	14141258	14141381	hopper	1392	1413	23	123	'10-13	65.82	5.5	3.5	intron	CG17341 +	chr2L_23_14140001	chr2L_14140001	0.43	RAL-142
49	chr2L	14708821	14708975	opus	498	7114	23	154	'15-8	65.53	9.4	2.2	intergenic	not near genes	chr2L_23_14705001	chr2L_14705001	0.65	RAL-142
50	chr2L	14848350	14848480	pogo	1	2086	23	130	'18-5	66.03	3.3	5.3	intron	CG15279 -	chr2L_23_14845001	chr2L_14845001	0.78	RAL-142
51	chr2L	14917892	14917991	hopper	1378	14	11	99	'2-9	64.85	2.6	3.1	intron	CG42313 -	chr2L_11_14915001	chr2L_14915001	0.18	RAL-142
52	chr2L	14924352	14924475	mdg1	7047	7441	4	123	'2-2	67.42	2.5	1.1	intron	CG42313 -	chr2L_4_14920001	chr2L_14920001	0.50	RAL-142
53	chr2L	15763803	15763947	blood	7017	376	20	144	'13-7	67.19	4.0	4.0	intergenic	CG3793 +	chr2L_20_15760001	chr2L_15760001	0.65	RAL-142
54	chr2L	15894554	15894647	BS	5070	5078	6	93	'1-5	68.12	4.0	1.2	intergenic	not near genes	chr2L_6_15890001	chr2L_15890001	0.17	RAL-142
55	chr2L	15963409	15963531	297	6587	387	7	122	'3-4	67.63	1.1	3.3	intergenic	not near genes	chr2L_7_15960001	chr2L_15960001	0.43	RAL-142
56	chr2L	15988692	15988794	412	7524	19	19	102	'4-15	63.67	4.5	3.5	intergenic	not near genes	chr2L_19_15985001	chr2L_15985001	0.21	RAL-142
57	chr2L	16067033	16067185	HMS-Beagle2	7195	6882	35	152	'19-16	64.49	6.1	4.9	intron	beat-Ia +	chr2L_35_16065001	chr2L_16065001	0.54	RAL-142
58	chr2L	16230279	16230408	blood	7378	10	17	129	'6-11	60.59	3.0	4.2	intergenic	not near genes	chr2L_17_16230001	chr2L_16230001	0.35	RAL-142
59	chr2L	16253999	16254094	FB	14	17	7	95	'5-2	61.98	2.4	2.1	intron	PRL-1 -	chr2L_7_16250001	chr2L_16250001	0.71	RAL-142
60	chr2L	16529165	16529285	blood	7010	7357	19	120	'16-3	67.04	6.9	2.4	intron	CG5953 -	chr2L_19_16525001	chr2L_16525001	0.84	RAL-142
61	chr2L	16606811	16606868	F-element	137	77	16	57	'7-9	61.87	6.8	2.1	intron,exon	CG42389 +,CG31815 +	chr2L_16_16605001	chr2L_16605001	0.44	RAL-142
62	chr2L	16742214	16742267	412	11	7101	25	53	'7-18	66.73	20.0	1.2	exon	ChLD3 +	chr2L_25_16740001	chr2L_16740001	0.28	RAL-142
63	chr2L	17123226	17123341	roo	394	15	8	115	'3-5	63.62	1.3	3.5	intergenic	CG31784 -	chr2L_8_17120001	chr2L_17120001	0.38	RAL-142
64	chr2L	17263101	17263235	Transpac	11	5222	12	134	'5-7	69.66	2.4	3.5	intergenic	not near genes	chr2L_12_17260001	chr2L_17260001	0.42	RAL-142
65	chr2L	17334234	17334581	copia	246	4874	8	347	'1-7	72.63	0.6	5.0	intergenic	not near genes	chr2L_8_17330001	chr2L_17330001	0.12	RAL-142
66	chr2L	17393321	17393436	FB	11	14	11	115	'7-4	61.74	2.3	3.3	intron	CLIP-190 +	chr2L_11_17390001	chr2L_17390001	0.64	RAL-142
67	chr2L	17531528	17531631	3S18	6103	18	7	103	'2-5	68.35	1.9	2.4	exon	CG15145 -	chr2L_7_17530001	chr2L_17530001	0.29	RAL-142
68	chr2L	17545799	17545841	opus	493	7472	10	42	'5-5	65.32	6.8	1.3	intergenic	not near genes	chr2L_10_17545001	chr2L_17545001	0.50	RAL-142
69	chr2L	17574345	17574459	hopper	1407	1411	10	114	'4-6	62.88	3.5	2.2	intergenic	mir-287 +	chr2L_10_17570001	chr2L_17570001	0.40	RAL-142
70	chr2L	17785777	17785884	roo	8687	389	11	107	'1-10	67.12	2.8	2.9	intergenic	not near genes	chr2L_11_17785001	chr2L_17785001	0.09	RAL-142
71	chr2L	18181019	18181121	hobo	8	2935	8	102	'7-1	62.35	6.1	1.1	intron,3` UTR	CG42750 -,CG7180 -	chr2L_8_18180001	chr2L_18180001	0.88	RAL-142
72	chr2L	18199759	18199789	Ivk	5330	5352	6	30	'3-3	61.61	6.0	0.9	intron	CG42750 -	chr2L_6_18195001	chr2L_18195001	0.50	RAL-142
73	chr2L	18570470	18570577	FB	17	6	12	107	'5-7	64.83	3.4	2.7	intron	Pde11 -	chr2L_12_18570001	chr2L_18570001	0.42	RAL-142
74	chr2L	18675574	18675709	412	1	15	41	135	'28-13	62.14	7.1	5.1	exon	Mst36Fa -	chr2L_41_18675001	chr2L_18675001	0.68	RAL-142
75	chr2L	18693983	18694118	pogo	2100	3	27	135	'11-16	64.14	4.9	4.6	intron	CG10383 -	chr2L_27_18690001	chr2L_18690001	0.41	RAL-142
76	chr2L	18749820	18749941	pogo	2095	11	15	121	'9-6	68.14	5.0	2.5	intergenic	not near genes	chr2L_15_18745001	chr2L_18745001	0.60	RAL-142
77	chr2L	19129292	19129421	FB	4	14	33	129	'19-14	64.08	9.9	3.0	3` UTR	l(2)37Cd +	chr2L_33_19125001	chr2L_19125001	0.58	RAL-142
78	chr2L	19157488	19157581	Juan	4195	4042	7	93	'5-2	59.20	2.8	1.8	intron	brat +	chr2L_7_19155001	chr2L_19155001	0.71	RAL-142
79	chr2L	19212235	19212279	flea	5004	206	9	44	'2-7	65.24	5.4	1.4	intergenic	not near genes	chr2L_9_19210001	chr2L_19210001	0.22	RAL-142
80	chr2L	19320435	19320555	Juan	4194	1	12	120	'8-4	65.94	3.6	2.6	intergenic	not near genes	chr2L_12_19320001	chr2L_19320001	0.67	RAL-142
81	chr2L	19602869	19602932	hobo	2907	21	16	63	'12-4	71.69	2.6	4.4	intron,intron	Lar +,CR44978 -	chr2L_16_19600001	chr2L_19600001	0.75	RAL-142
82	chr2L	19681408	19681506	hopper	3	20	6	98	'1-5	62.81	3.8	1.2	intron	Lar +	chr2L_6_19680001	chr2L_19680001	0.17	RAL-142
83	chr2L	19808467	19808608	copia	4873	250	17	141	'8-9	70.72	2.3	5.2	intron	sick +	chr2L_17_19805001	chr2L_19805001	0.47	RAL-142
84	chr2L	19817825	19817868	G4	3812	3770	5	43	'2-3	72.23	5.5	0.8	intron	sick +	chr2L_5_19815001	chr2L_19815001	0.40	RAL-142
85	chr2L	20398449	20398567	roo	18	409	19	118	'5-14	67.51	5.5	2.9	intron	CG10947 -	chr2L_19_20395001	chr2L_20395001	0.26	RAL-142
86	chr2L	20526018	20526115	hopper	16	1383	11	97	'7-4	62.70	3.3	2.6	intergenic	not near genes	chr2L_11_20525001	chr2L_20525001	0.64	RAL-142
87	chr2L	20797639	20797753	P-element	20	2876	16	114	'9-7	48.09	4.7	2.8	intergenic	CG9328 +	chr2L_16_20795001	chr2L_20795001	0.56	RAL-142
88	chr2L	20841948	20842003	G6	1967	2017	10	55	'6-4	62.70	9.0	1.0	intron	CG31676 +	chr2L_10_20840001	chr2L_20840001	0.60	RAL-142
89	chr2L	20902928	20903036	roo	9053	8671	13	108	'5-8	64.57	1.8	4.6	intron,intron	CG43739 -,sky -	chr2L_13_20900001	chr2L_20900001	0.38	RAL-142
90	chr2L	20939486	20939627	hopper	1410	5	8	141	'4-4	68.45	2.9	2.1	intergenic	not near genes	chr2L_8_20935001	chr2L_20935001	0.50	RAL-142
91	chr2L	21034019	21034156	412	488	6	43	137	'7-36	62.47	7.2	5.2	intron	CG42238 -	chr2L_43_21030001	chr2L_21030001	0.16	RAL-142
92	chr2L	21064909	21064994	3S18	36	311	8	85	'7-1	58.72	5.9	1.2	intron	CG9265 -	chr2L_8_21060001	chr2L_21060001	0.88	RAL-142
93	chr2L	21089134	21089246	flea	240	22	8	112	'7-1	63.90	2.1	2.6	intergenic	CG9259 +,ppk13 -	chr2L_8_21085001	chr2L_21085001	0.88	RAL-142
94	chr2L	21191321	21191467	297	391	6584	6	146	'3-3	71.11	1.7	2.2	intron	Ret -	chr2L_6_21190001	chr2L_21190001	0.50	RAL-142
95	chr2L	21570235	21570280	Dm88	4416	4370	9	45	'4-5	64.24	2.4	2.6	intergenic	not near genes	chr2L_9_21570001	chr2L_21570001	0.44	RAL-142
96	chr2L	21734970	21735022	Doc	13	40	17	52	'5-12	62.49	6.7	2.2	intergenic	not near genes	chr2L_17_21730001	chr2L_21730001	0.29	RAL-142
97	chr2L	21762373	21762420	INE-1	528	575	6	47	'2-4	62.88	7.1	0.7	3` UTR	CG31612 -	chr2L_6_21760001	chr2L_21760001	0.33	RAL-142
98	chr2L	21784817	21784927	I-element	7	5346	17	110	'12-5	66.04	5.0	2.8	intron	CG31612 -	chr2L_17_21780001	chr2L_21780001	0.71	RAL-142
99	chr2L	22497639	22497777	invader1	3955	3703	4	138	'1-3	73.40	0.0	4.0	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.25	RAL-142
100	chr2L	22497812	22497841	Stalker4	7003	6992	5	29	'1-4	60.00	0.4	3.6	intergenic	not near genes	chr2L_5_22495001	chr2L_22495001	0.20	RAL-142
101	chr2L	22775545	22775586	pogo	2043	2086	4	41	'3-1	69.67	1.6	1.5	intergenic	not near genes	chr2L_4_22775001	chr2L_22775001	0.75	RAL-142
102	chr2L	23295844	23295888	micropia	20	4971	8	44	'5-3	61.89	4.8	1.4	intergenic	not near genes	chr2L_8_23295001	chr2L_23295001	0.62	RAL-142
103	chr2R	330094	330237	HMS-Beagle2	7190	4	23	143	'11-12	65.67	5.7	3.4	intergenic	not near genes	chr2R_23_330001	chr2R_330001	0.48	RAL-142
104	chr2R	883055	883170	F-element	20	4672	11	115	'4-7	61.43	4.1	2.2	intergenic	not near genes	chr2R_11_880001	chr2R_880001	0.36	RAL-142
105	chr2R	892413	892461	Stalker2	7301	14	20	48	'13-7	64.67	5.1	3.3	intergenic	not near genes	chr2R_20_890001	chr2R_890001	0.65	RAL-142
106	chr2R	1320673	1320709	diver2	4878	4843	18	36	'10-8	54.99	27.8	0.6	intergenic	not near genes	chr2R_18_1320001	chr2R_1320001	0.56	RAL-142
107	chr2R	2752371	2752434	copia	4916	236	5	63	'2-3	63.59	2.1	1.6	intergenic	not near genes	chr2R_5_2750001	chr2R_2750001	0.40	RAL-142
108	chr2R	4137492	4137635	HMS-Beagle2	6	308	22	143	'12-10	67.33	6.3	3.0	intergenic	not near genes	chr2R_22_4135001	chr2R_4135001	0.55	RAL-142
109	chr2R	4137665	4137762	Juan	4195	9	15	97	'13-2	65.66	3.5	3.3	intergenic	not near genes	chr2R_15_4135001	chr2R_4135001	0.87	RAL-142
110	chr2R	4265342	4265444	flea	12	244	6	102	'3-3	62.83	4.2	1.2	intergenic	not near genes	chr2R_6_4265001	chr2R_4265001	0.50	RAL-142
111	chr2R	4606204	4606307	1360	9	17	8	103	'4-4	61.75	8.6	0.8	intron	p120ctn +	chr2R_8_4605001	chr2R_4605001	0.50	RAL-142
112	chr2R	5173097	5173232	Stalker4	3	397	7	135	'1-6	69.17	6.2	1.0	intergenic	not near genes	chr2R_7_5170001	chr2R_5170001	0.14	RAL-142
113	chr2R	5173183	5173212	Stalker	7196	7231	4	29	'2-2	64.82	10.0	0.4	intergenic	not near genes	chr2R_4_5170001	chr2R_5170001	0.50	RAL-142
114	chr2R	5214942	5214986	F-element	23	62	11	44	'9-2	60.22	7.5	1.3	intron	Nipped-A -	chr2R_11_5210001	chr2R_5210001	0.82	RAL-142
115	chr2R	5266008	5266055	opus	7050	1	6	47	'3-3	64.02	5.1	1.0	intron	d4 +	chr2R_6_5265001	chr2R_5265001	0.50	RAL-142
116	chr2R	5674618	5674745	S-element	1712	1703	8	127	'2-6	72.31	2.5	2.3	intergenic	not near genes	chr2R_8_5670001	chr2R_5670001	0.25	RAL-142
117	chr2R	6418850	6418951	flea	4973	4765	9	101	'3-6	68.63	3.5	2.0	intergenic	not near genes	chr2R_9_6415001	chr2R_6415001	0.33	RAL-142
118	chr2R	6438335	6438363	Stalker4	387	7318	5	28	'3-2	62.08	10.2	0.4	intergenic	not near genes	chr2R_5_6435001	chr2R_6435001	0.60	RAL-142
119	chr2R	6537869	6538004	roo	9069	8677	37	135	'21-16	65.77	6.7	4.8	intron	jing +	chr2R_37_6535001	chr2R_6535001	0.57	RAL-142
120	chr2R	6707659	6707792	1360	3384	7	39	133	'23-16	66.25	10.4	3.4	intron,intron,intron	CG3409 -,CG45092 -,CR43611 +	chr2R_39_6705001	chr2R_6705001	0.59	RAL-142
121	chr2R	6801682	6801737	McClintock	439	6427	18	55	'7-11	67.29	6.4	2.4	intergenic	not near genes	chr2R_18_6800001	chr2R_6800001	0.39	RAL-142
122	chr2R	6984291	6984438	HMS-Beagle2	6891	311	47	147	'27-20	67.71	9.5	4.5	intron,intron	vimar -,CG30156 -	chr2R_47_6980001	chr2R_6980001	0.57	RAL-142
123	chr2R	7290596	7290683	Max-element	300	13	10	87	'5-5	62.96	8.4	1.1	intron	pwn +	chr2R_10_7290001	chr2R_7290001	0.50	RAL-142
124	chr2R	7416232	7416328	transib1	1892	1894	4	96	'1-3	58.77	4.5	0.7	intergenic	not near genes	chr2R_4_7415001	chr2R_7415001	0.25	RAL-142
125	chr2R	7981096	7981227	1360	3388	3376	51	131	'33-18	67.75	9.1	5.0	exon	ACC -	chr2R_51_7980001	chr2R_7980001	0.65	RAL-142
126	chr2R	8083783	8083877	Idefix	7337	5	7	94	'1-6	73.34	7.0	0.9	intron	sut1 +	chr2R_7_8080001	chr2R_8080001	0.14	RAL-142
127	chr2R	8086762	8086885	1360	3376	3387	33	123	'14-19	64.86	6.6	4.3	3` UTR	sut1 +	chr2R_33_8085001	chr2R_8085001	0.42	RAL-142
128	chr2R	8397398	8397519	412	495	7068	37	121	'18-19	59.99	5.7	5.5	intron	CG2121 -	chr2R_37_8395001	chr2R_8395001	0.49	RAL-142
129	chr2R	8530714	8530858	mdg1	7060	7456	17	144	'7-10	55.67	3.0	4.2	intron	mtt -	chr2R_17_8530001	chr2R_8530001	0.41	RAL-142
130	chr2R	9138672	9138790	pogo	19	2099	24	118	'9-15	67.02	12.1	1.8	intron,intron	CG44286 +,CG8788 +	chr2R_24_9135001	chr2R_9135001	0.38	RAL-142
131	chr2R	9408164	9408235	FB	8	22	8	71	'5-3	66.65	2.1	2.6	intron	wun -	chr2R_8_9405001	chr2R_9405001	0.62	RAL-142
132	chr2R	9552255	9552381	S-element	1708	1696	10	126	'3-7	63.02	3.4	2.3	intergenic	not near genes	chr2R_10_9550001	chr2R_9550001	0.30	RAL-142
133	chr2R	9754691	9754759	hopper	8	1360	12	68	'10-2	60.61	4.0	2.4	intron	trpl +	chr2R_12_9750001	chr2R_9750001	0.83	RAL-142
134	chr2R	9871015	9871065	roo	401	9044	9	50	'5-4	69.43	4.1	1.8	intron	cbx -	chr2R_9_9870001	chr2R_9870001	0.56	RAL-142
135	chr2R	9871532	9871580	roo	8716	8675	10	48	'8-2	68.81	2.8	2.6	intron,5` UTR	cbx -,CG18446 +	chr2R_10_9870001	chr2R_9870001	0.80	RAL-142
136	chr2R	9950522	9950559	S-element	34	1703	4	37	'1-3	65.39	4.0	0.8	intron	Mef2 -	chr2R_4_9950001	chr2R_9950001	0.25	RAL-142
137	chr2R	9953263	9953361	pogo	26	2071	16	98	'13-3	65.02	2.6	4.4	intron	Mef2 -	chr2R_16_9950001	chr2R_9950001	0.81	RAL-142
138	chr2R	9963455	9963755	pogo	7	14	67	300	'41-26	64.49	6.1	9.4	3` UTR	Pal1 +	chr2R_67_9960001	chr2R_9960001	0.61	RAL-142
139	chr2R	10047093	10047204	FB	12	19	8	111	'5-3	62.84	2.5	2.3	intron	oys -	chr2R_8_10045001	chr2R_10045001	0.62	RAL-142
140	chr2R	10090974	10091023	roo	406	9026	20	49	'11-9	66.89	12.8	1.4	intron	CG2269 +	chr2R_20_10090001	chr2R_10090001	0.55	RAL-142
141	chr2R	10129724	10129841	Burdock	20	240	16	117	'3-13	65.60	3.6	3.5	intron	gem +	chr2R_16_10125001	chr2R_10125001	0.19	RAL-142
142	chr2R	10163531	10163654	Juan	4206	4087	12	123	'7-5	59.08	1.8	4.3	intron	KCNQ -	chr2R_12_10160001	chr2R_10160001	0.58	RAL-142
143	chr2R	10241482	10241534	I-element	5301	5350	18	52	'11-7	64.04	6.4	2.4	intron	Hdc +	chr2R_18_10240001	chr2R_10240001	0.61	RAL-142
144	chr2R	10859578	10859706	297	389	12	5	128	'2-3	61.67	2.4	1.5	intron	CG30015 -	chr2R_5_10855001	chr2R_10855001	0.40	RAL-142
145	chr2R	11273954	11274014	Stalker2	7251	67	19	60	'10-9	63.31	8.4	2.0	3` UTR	TpnC47D -	chr2R_19_11270001	chr2R_11270001	0.53	RAL-142
146	chr2R	11379703	11379811	jockey	4674	4984	31	108	'18-13	61.24	7.6	3.6	intergenic	not near genes	chr2R_31_11375001	chr2R_11375001	0.58	RAL-142
147	chr2R	11632281	11632404	Tirant	1	8492	7	123	'3-4	68.76	4.1	1.4	intron	CG9005 -	chr2R_7_11630001	chr2R_11630001	0.43	RAL-142
148	chr2R	12185302	12185430	accord	7377	13	13	128	'6-7	64.95	12.7	0.9	3` UTR,exon	CG13175 +,CG33964 +	chr2R_13_12185001	chr2R_12185001	0.46	RAL-142
149	chr2R	12336636	12336680	pogo	49	11	12	44	'6-6	68.02	7.2	1.5	intergenic	CG34021 +,CG8490 +	chr2R_12_12335001	chr2R_12335001	0.50	RAL-142
150	chr2R	12416837	12416969	pogo	2084	6	33	132	'15-18	65.00	5.8	4.9	exon	CG13157 +	chr2R_33_12415001	chr2R_12415001	0.45	RAL-142
151	chr2R	12636198	12636296	I-element	5322	23	10	98	'5-5	62.66	9.8	0.9	intergenic	CG33671 -,CG33672 -,Iswi +	chr2R_10_12635001	chr2R_12635001	0.50	RAL-142
152	chr2R	12839021	12839080	jockey	4768	4790	6	59	'3-3	64.34	3.7	1.3	intergenic	CR44453 -	chr2R_6_12835001	chr2R_12835001	0.50	RAL-142
153	chr2R	13313391	13313468	hobo	2916	8	15	77	'3-12	64.15	6.6	2.0	intergenic	not near genes	chr2R_15_13310001	chr2R_13310001	0.20	RAL-142
154	chr2R	13345952	13346006	jockey	29	10	5	54	'2-3	64.70	0.5	3.3	intron	CR44206 -	chr2R_5_13345001	chr2R_13345001	0.40	RAL-142
155	chr2R	13648579	13648633	hopper	39	1361	6	54	'5-1	69.88	0.5	4.0	intron	fas +	chr2R_6_13645001	chr2R_13645001	0.83	RAL-142
156	chr2R	13699455	13699511	jockey	4821	4765	25	56	'11-14	66.98	8.1	2.7	intron	fas +	chr2R_25_13695001	chr2R_13695001	0.44	RAL-142
157	chr2R	13934400	13934525	FB	21	1	15	125	'7-8	70.51	7.4	1.8	intron	shot -	chr2R_15_13930001	chr2R_13930001	0.47	RAL-142
158	chr2R	14393234	14393283	Doc	461	491	10	49	'6-4	66.99	7.2	1.2	intergenic	not near genes	chr2R_10_14390001	chr2R_14390001	0.60	RAL-142
159	chr2R	14588893	14588948	jockey	4819	4763	10	55	'5-5	64.42	4.1	2.0	intergenic	not near genes	chr2R_10_14585001	chr2R_14585001	0.50	RAL-142
160	chr2R	14650630	14650668	jockey	36	14	8	38	'3-5	59.74	6.2	1.1	intergenic	not near genes	chr2R_8_14650001	chr2R_14650001	0.38	RAL-142
161	chr2R	14661067	14661183	hopper	1404	21	13	116	'6-7	58.02	2.2	4.1	intergenic	not near genes	chr2R_13_14660001	chr2R_14660001	0.46	RAL-142
162	chr2R	14883952	14884086	mdg3	5486	5257	17	134	'7-10	63.03	2.8	4.5	3` UTR	Cyp6a20 +	chr2R_17_14880001	chr2R_14880001	0.41	RAL-142
163	chr2R	14885124	14885160	BS	5017	5035	5	36	'2-3	64.86	3.1	1.2	intergenic	Cyp6a21 -	chr2R_5_14885001	chr2R_14885001	0.40	RAL-142
164	chr2R	15155170	15155283	flea	235	4768	25	113	'18-7	66.88	7.2	3.0	intergenic	igl +	chr2R_25_15155001	chr2R_15155001	0.72	RAL-142
165	chr2R	15374737	15374793	1360	10	395	7	56	'5-2	54.58	3.8	1.5	intergenic	not near genes	chr2R_7_15370001	chr2R_15370001	0.71	RAL-142
166	chr2R	15418981	15419096	hopper	4	1400	10	115	'4-6	63.79	4.3	1.9	intron	CG43729 +	chr2R_10_15415001	chr2R_15415001	0.40	RAL-142
167	chr2R	15445825	15445950	opus	475	7120	5	125	'3-2	66.82	6.9	0.6	intron	CG43729 +	chr2R_5_15445001	chr2R_15445001	0.60	RAL-142
168	chr2R	15497897	15497997	roo	9052	8694	6	100	'2-4	66.54	3.1	1.5	intergenic	not near genes	chr2R_6_15495001	chr2R_15495001	0.33	RAL-142
169	chr2R	15693455	15693561	HMS-Beagle2	6892	292	10	106	'7-3	64.83	7.3	1.2	3` UTR,exon	CR44372 -,CG30087 +	chr2R_10_15690001	chr2R_15690001	0.70	RAL-142
170	chr2R	15801083	15801166	roo	26	394	6	83	'2-4	66.96	9.4	0.6	intron,intron	Zasp52 -,tun +	chr2R_6_15800001	chr2R_15800001	0.33	RAL-142
171	chr2R	15855630	15855737	opus	110	467	11	107	'6-5	66.20	8.8	1.1	intergenic	CG12970 +	chr2R_11_15855001	chr2R_15855001	0.55	RAL-142
172	chr2R	16462292	16462337	roo	397	345	6	45	'3-3	65.81	9.1	0.6	intergenic	not near genes	chr2R_6_16460001	chr2R_16460001	0.50	RAL-142
173	chr2R	17243693	17243739	roo	9066	355	5	46	'2-3	67.25	6.7	0.6	intron	mbl +	chr2R_5_17240001	chr2R_17240001	0.40	RAL-142
174	chr2R	17436667	17436723	Tirant	398	8493	7	56	'1-6	65.05	9.6	0.7	intron	EDTP -	chr2R_7_17435001	chr2R_17435001	0.14	RAL-142
175	chr2R	17512959	17512998	jockey	4764	4808	6	39	'2-4	69.03	13.5	0.4	exon	CG4847 +	chr2R_6_17510001	chr2R_17510001	0.33	RAL-142
176	chr2R	17806030	17806194	Transpac	25	297	7	164	'1-6	62.72	5.9	1.0	intron	grh +	chr2R_7_17805001	chr2R_17805001	0.14	RAL-142
177	chr2R	17955545	17955584	297	353	392	6	39	'2-4	74.52	10.6	0.5	exon	PpY-55A -	chr2R_6_17955001	chr2R_17955001	0.33	RAL-142
178	chr2R	18296840	18296980	pogo	4	2098	5	140	'3-2	71.83	3.7	1.1	intron	sbb -	chr2R_5_18295001	chr2R_18295001	0.60	RAL-142
179	chr2R	18397999	18398127	S-element	1695	1711	10	128	'5-5	63.92	5.0	1.7	intron	GstE10 -	chr2R_10_18395001	chr2R_18395001	0.50	RAL-142
180	chr2R	18507810	18507932	Bari1	15	1694	26	122	'14-12	63.30	7.3	3.1	intergenic	not near genes	chr2R_26_18505001	chr2R_18505001	0.54	RAL-142
181	chr2R	18523507	18523636	roo	395	8672	5	129	'4-1	64.81	7.9	0.6	intron	CG43066 +	chr2R_5_18520001	chr2R_18520001	0.80	RAL-142
182	chr2R	18807871	18807927	BS	5028	5085	14	56	'8-6	70.62	4.6	2.5	intergenic	CG15096 -	chr2R_14_18805001	chr2R_18805001	0.57	RAL-142
183	chr2R	19010384	19010493	Ivk	12	5361	5	109	'3-2	46.71	1.5	2.0	intergenic	not near genes	chr2R_5_19010001	chr2R_19010001	0.60	RAL-142
184	chr2R	19096872	19097007	flea	5012	4755	5	135	'3-2	74.90	2.5	1.4	intron	5-HT1A +	chr2R_5_19095001	chr2R_19095001	0.60	RAL-142
185	chr2R	19166615	19166707	FB	31	9	8	92	'4-4	74.80	1.9	2.8	intron	CG10737 +	chr2R_8_19165001	chr2R_19165001	0.50	RAL-142
186	chr2R	19405855	19405993	HMS-Beagle	6796	7030	37	138	'18-19	66.33	10.4	3.2	intron	hts -	chr2R_37_19405001	chr2R_19405001	0.49	RAL-142
187	chr2R	19677774	19677868	hobo	25	2928	12	94	'8-4	64.30	11.3	1.0	intergenic	not near genes	chr2R_12_19675001	chr2R_19675001	0.67	RAL-142
188	chr2R	19684426	19684539	412	482	7080	10	113	'5-5	65.43	6.6	1.3	intergenic	CR44505 -	chr2R_10_19680001	chr2R_19680001	0.50	RAL-142
189	chr2R	20436684	20436819	opus	496	3	19	135	'13-6	68.03	6.1	2.7	intron	CG12484 +	chr2R_19_20435001	chr2R_20435001	0.68	RAL-142
190	chr2R	20924173	20924323	mdg1	7459	1	36	150	'21-15	67.48	6.5	4.8	intron	Rx +	chr2R_36_20920001	chr2R_20920001	0.58	RAL-142
191	chr2R	21199686	21199732	jockey	64	17	14	46	'6-8	53.42	2.9	3.6	intergenic	Lapsyn +	chr2R_14_21195001	chr2R_21195001	0.43	RAL-142
192	chr2R	21361973	21362083	Tirant	8495	10	16	110	'8-8	65.23	3.6	3.5	intron	cv-2 -	chr2R_16_21360001	chr2R_21360001	0.50	RAL-142
193	chr2R	21591949	21592096	Tirant	8112	399	21	147	'7-14	67.28	6.7	2.7	intergenic	CG33225 +	chr2R_21_21590001	chr2R_21590001	0.33	RAL-142
194	chr2R	21735228	21735406	blood	57	34	15	178	'14-1	63.23	4.7	2.6	intergenic	not near genes	chr2R_15_21735001	chr2R_21735001	0.93	RAL-142
195	chr2R	22661182	22661328	Transpac	5226	6	20	146	'1-19	65.63	7.5	2.4	3` UTR,3` UTR,3` UTR	CG13510 +,CG13511 +,CG42565 +	chr2R_20_22660001	chr2R_22660001	0.05	RAL-142
196	chr2R	22663305	22663437	mdg1	423	7044	30	132	'19-11	64.98	5.4	4.7	intergenic	CG42566 +,CG4250 +	chr2R_30_22660001	chr2R_22660001	0.63	RAL-142
197	chr2R	23230546	23230693	412	1	490	17	147	'4-13	65.94	4.7	3.0	intergenic	not near genes	chr2R_17_23230001	chr2R_23230001	0.24	RAL-142
198	chr2R	23354260	23354395	Tabor	6857	487	31	135	'11-20	64.87	7.2	3.8	intergenic	CG30409 +	chr2R_31_23350001	chr2R_23350001	0.35	RAL-142
199	chr2R	23415611	23415662	F-element	14	62	14	51	'8-6	56.62	12.4	1.0	intron	CG9812 -	chr2R_14_23415001	chr2R_23415001	0.57	RAL-142
200	chr2R	23477813	23477869	F-element	14	58	17	56	'8-9	66.28	10.9	1.4	intron	CG43795 +	chr2R_17_23475001	chr2R_23475001	0.47	RAL-142
201	chr2R	24031435	24031575	1360	3386	1	43	140	'25-18	67.09	13.1	3.0	intergenic	CG30172 -,Chi -	chr2R_43_24030001	chr2R_24030001	0.58	RAL-142
202	chr2R	24388333	24388390	BS	98	3	15	57	'7-8	61.06	8.5	1.6	intron	mAChR-A -	chr2R_15_24385001	chr2R_24385001	0.47	RAL-142
203	chr2R	25117988	25118098	Transpac	308	32	15	110	'9-6	67.54	3.2	3.6	intron	lov -	chr2R_15_25115001	chr2R_25115001	0.60	RAL-142
204	chr2R	25203739	25203782	1360	10	88	6	43	'3-3	63.14	1.5	2.4	intron	CG9380 -	chr2R_6_25200001	chr2R_25200001	0.50	RAL-142
205	chr2R	25257563	25257629	HeT-A	6058	6019	4	66	'2-2	69.51	11.9	0.3	intergenic	not near genes	chr2R_4_25255001	chr2R_25255001	0.50	RAL-142
206	chr2R	25257576	25257631	TAHRE	10415	10389	14	55	'8-6	61.23	12.8	1.0	intergenic	not near genes	chr2R_14_25255001	chr2R_25255001	0.57	RAL-142
207	chr3L	36273	36323	Tirant	389	359	12	50	'6-6	68.27	4.4	2.2	intergenic	not near genes	chr3L_12_35001	chr3L_35001	0.50	RAL-142
208	chr3L	64533	64598	F-element	299	247	16	65	'9-7	66.03	6.4	2.2	intergenic	not near genes	chr3L_16_60001	chr3L_60001	0.56	RAL-142
209	chr3L	126230	126357	pogo	14	2088	19	127	'8-11	63.68	4.0	3.8	intergenic	CR45402 +	chr3L_19_125001	chr3L_125001	0.42	RAL-142
210	chr3L	131736	131844	P-element	2879	9	18	108	'6-12	52.00	5.3	2.9	intron	Pdk1 +	chr3L_18_130001	chr3L_130001	0.33	RAL-142
211	chr3L	217292	217415	roo	8676	407	33	123	'15-18	69.70	9.2	3.2	5` UTR	Kaz1-ORFB +	chr3L_33_215001	chr3L_215001	0.45	RAL-142
212	chr3L	885697	885819	roo	404	17	7	122	'5-2	71.96	5.1	1.1	intron	CG32479 +	chr3L_7_885001	chr3L_885001	0.71	RAL-142
213	chr3L	2001978	2002092	gypsy5	28	7344	10	114	'7-3	58.47	1.2	4.5	intergenic	not near genes	chr3L_10_2000001	chr3L_2000001	0.70	RAL-142
214	chr3L	2033742	2033859	297	6593	389	6	117	'3-3	73.73	4.3	1.1	intergenic	not near genes	chr3L_6_2030001	chr3L_2030001	0.50	RAL-142
215	chr3L	2120951	2121060	I-element	5333	12	10	109	'6-4	60.73	7.0	1.2	intron	zormin -	chr3L_10_2120001	chr3L_2120001	0.60	RAL-142
216	chr3L	2815027	2815075	Doc	6	51	12	48	'2-10	61.82	8.5	1.3	intron	CG43444 -	chr3L_12_2815001	chr3L_2815001	0.17	RAL-142
217	chr3L	2965827	2965858	297	378	374	4	31	'1-3	66.89	8.9	0.4	intergenic	not near genes	chr3L_4_2965001	chr3L_2965001	0.25	RAL-142
218	chr3L	2987321	2987467	blood	372	7011	17	146	'6-11	64.43	1.7	6.3	intergenic	not near genes	chr3L_17_2985001	chr3L_2985001	0.35	RAL-142
219	chr3L	3240489	3240623	diver	217	4	35	134	'17-18	65.68	6.2	4.9	intergenic	not near genes	chr3L_35_3240001	chr3L_3240001	0.49	RAL-142
220	chr3L	3371121	3371251	copia	250	15	19	130	'1-18	64.69	8.4	2.0	3` UTR	YT521-B -	chr3L_19_3370001	chr3L_3370001	0.05	RAL-142
221	chr3L	3555492	3555544	412	7095	10	17	52	'10-7	62.38	8.5	1.8	intron	Eip63E +	chr3L_17_3555001	chr3L_3555001	0.59	RAL-142
222	chr3L	3611718	3611819	blood	7347	370	22	101	'6-16	61.32	3.2	5.2	intergenic	CG10359 +	chr3L_22_3610001	chr3L_3610001	0.27	RAL-142
223	chr3L	4264932	4265062	Transpac	4927	296	26	130	'20-6	63.44	6.5	3.5	intron	CG1273 +	chr3L_26_4260001	chr3L_4260001	0.77	RAL-142
224	chr3L	5204426	5204465	jockey	4722	4688	12	39	'6-6	63.59	5.2	1.9	intron	shep -	chr3L_12_5200001	chr3L_5200001	0.50	RAL-142
225	chr3L	5320574	5320667	roo	8680	9034	19	93	'18-1	62.54	4.3	3.6	intergenic	not near genes	chr3L_19_5320001	chr3L_5320001	0.95	RAL-142
226	chr3L	5971642	5971784	pogo	2094	5	14	142	'4-10	68.40	4.0	2.8	intron	CG10479 -	chr3L_14_5970001	chr3L_5970001	0.29	RAL-142
227	chr3L	6899794	6899900	hopper	3	27	10	106	'7-3	65.35	4.7	1.8	intergenic	not near genes	chr3L_10_6895001	chr3L_6895001	0.70	RAL-142
228	chr3L	7219662	7219786	roo	406	19	30	124	'19-11	63.92	4.2	5.8	intergenic	not near genes	chr3L_30_7215001	chr3L_7215001	0.63	RAL-142
229	chr3L	7400724	7400815	roo	408	15	15	91	'6-9	61.88	3.5	3.3	exon	CG18417 +	chr3L_15_7400001	chr3L_7400001	0.40	RAL-142
230	chr3L	7846424	7846536	3S18	5770	309	18	112	'14-4	69.19	4.4	3.3	intron	Pdp1 -	chr3L_18_7845001	chr3L_7845001	0.78	RAL-142
231	chr3L	8011354	8011478	pogo	2085	20	11	124	'1-10	64.02	2.3	3.3	intron	nmo +	chr3L_11_8010001	chr3L_8010001	0.09	RAL-142
232	chr3L	8919638	8919726	roo	409	16	16	88	'2-14	65.97	4.0	3.2	intron	Tsp66E +	chr3L_16_8915001	chr3L_8915001	0.12	RAL-142
233	chr3L	9198442	9198549	1360	3373	10	12	107	'6-6	65.19	4.6	2.1	intergenic	not near genes	chr3L_12_9195001	chr3L_9195001	0.50	RAL-142
234	chr3L	9419497	9419631	S-element	1702	1710	19	134	'11-8	65.10	4.1	3.7	intron	CG3967 -	chr3L_19_9415001	chr3L_9415001	0.58	RAL-142
235	chr3L	9822200	9822332	pogo	2098	1	21	132	'8-13	61.93	3.2	5.0	intron	CG43897 +	chr3L_21_9820001	chr3L_9820001	0.38	RAL-142
236	chr3L	10109700	10109793	hobo	1	2707	14	93	'9-5	65.30	8.6	1.5	intron	dpr6 +	chr3L_14_10105001	chr3L_10105001	0.64	RAL-142
237	chr3L	10506735	10506877	hopper	10	1405	12	142	'9-3	59.84	1.9	4.1	intron	A2bp1 +	chr3L_12_10505001	chr3L_10505001	0.75	RAL-142
238	chr3L	10542503	10542589	hopper	14	13	5	86	'4-1	61.28	1.3	2.2	intron	A2bp1 +	chr3L_5_10540001	chr3L_10540001	0.80	RAL-142
239	chr3L	10702587	10702689	hopper	5	44	16	102	'11-5	65.47	6.1	2.3	intergenic	not near genes	chr3L_16_10700001	chr3L_10700001	0.69	RAL-142
240	chr3L	10722936	10723047	copia	4884	258	14	111	'12-2	64.98	3.4	3.2	intergenic	not near genes	chr3L_14_10720001	chr3L_10720001	0.86	RAL-142
241	chr3L	10723497	10723769	Burdock	238	249	9	272	'1-8	65.41	1.6	3.5	intergenic	not near genes	chr3L_9_10720001	chr3L_10720001	0.11	RAL-142
242	chr3L	10836492	10836638	opus	497	3	24	146	'14-10	67.51	8.5	2.5	intergenic	not near genes	chr3L_24_10835001	chr3L_10835001	0.58	RAL-142
243	chr3L	10911488	10911612	springer	26	7523	17	124	'12-5	61.94	5.6	2.6	intergenic	not near genes	chr3L_17_10910001	chr3L_10910001	0.71	RAL-142
244	chr3L	11085705	11085840	S-element	1707	1706	12	135	'6-6	66.39	5.8	1.8	exon	JIL-1 -	chr3L_12_11085001	chr3L_11085001	0.50	RAL-142
245	chr3L	12158417	12158538	297	6962	6592	18	121	'9-9	69.34	4.4	3.3	intron	CG9760 -	chr3L_18_12155001	chr3L_12155001	0.50	RAL-142
246	chr3L	12300116	12300171	1360	35	1	7	55	'6-1	55.99	3.3	1.6	intergenic	not near genes	chr3L_7_12300001	chr3L_12300001	0.86	RAL-142
247	chr3L	12301197	12301263	hopper	42	1403	13	66	'3-10	62.40	4.9	2.2	5` UTR	CR44550 +	chr3L_13_12300001	chr3L_12300001	0.23	RAL-142
248	chr3L	12677043	12677150	pogo	2	2096	26	107	'12-14	65.20	5.7	3.9	intergenic	not near genes	chr3L_26_12675001	chr3L_12675001	0.46	RAL-142
249	chr3L	13023958	13024096	412	7544	11	24	138	'9-15	63.71	5.5	3.7	intron	RpS12 +	chr3L_24_13020001	chr3L_13020001	0.38	RAL-142
250	chr3L	13160617	13160716	pogo	7	2079	15	99	'9-6	68.67	8.4	1.6	intergenic	not near genes	chr3L_15_13160001	chr3L_13160001	0.60	RAL-142
251	chr3L	13228451	13228568	P-element	2874	17	22	117	'8-14	48.82	5.1	3.6	intergenic	caps +	chr3L_22_13225001	chr3L_13225001	0.36	RAL-142
252	chr3L	13556684	13556834	hobo	9	2709	10	150	'7-3	65.76	5.4	1.6	intron	bru-3 -	chr3L_10_13555001	chr3L_13555001	0.70	RAL-142
253	chr3L	13925325	13925439	P-element	2878	2881	6	114	'4-2	50.66	1.9	2.1	5` UTR	Rgl -	chr3L_6_13925001	chr3L_13925001	0.67	RAL-142
254	chr3L	14261144	14261624	mdg1	58	7456	13	480	'9-4	68.33	2.9	3.3	intergenic	not near genes	chr3L_13_14260001	chr3L_14260001	0.69	RAL-142
255	chr3L	14274260	14274340	P-element	2850	6	7	80	'4-3	39.78	3.1	1.7	intergenic	fz +	chr3L_7_14270001	chr3L_14270001	0.57	RAL-142
256	chr3L	14396955	14397024	BS	5008	5066	7	69	'4-3	60.00	0.0	7.0	intergenic	not near genes	chr3L_7_14395001	chr3L_14395001	0.57	RAL-142
257	chr3L	14755028	14755103	P-element	46	2877	15	75	'3-12	48.16	7.1	1.9	intron,intron	CG42507 -,Trl -	chr3L_15_14755001	chr3L_14755001	0.20	RAL-142
258	chr3L	14811382	14811535	copia	257	4867	19	153	'4-15	59.83	4.5	3.5	intron	CG17839 +	chr3L_19_14810001	chr3L_14810001	0.21	RAL-142
259	chr3L	14822830	14822885	mdg1	394	7107	9	55	'6-3	64.14	3.3	2.1	intron	CG17839 +	chr3L_9_14820001	chr3L_14820001	0.67	RAL-142
260	chr3L	14929011	14929061	I-element	5296	5346	5	50	'3-2	66.81	0.3	3.8	intron	DCX-EMAP +	chr3L_5_14925001	chr3L_14925001	0.60	RAL-142
261	chr3L	15099551	15099656	G4	3807	3804	13	105	'6-7	52.61	4.5	2.4	intron	CTPsyn +	chr3L_13_15095001	chr3L_15095001	0.46	RAL-142
262	chr3L	15408466	15408513	jockey	58	4969	4	47	'1-3	62.40	0.6	2.5	intergenic	CG33259 +	chr3L_4_15405001	chr3L_15405001	0.25	RAL-142
263	chr3L	15525594	15525687	Ivk	5370	26	14	93	'10-4	61.96	4.0	2.8	intergenic	CG33985 -,CG33986 -	chr3L_14_15525001	chr3L_15525001	0.71	RAL-142
264	chr3L	15614443	15614524	jockey	4972	4694	21	81	'11-10	63.65	8.8	2.1	intron	comm3 -	chr3L_21_15610001	chr3L_15610001	0.52	RAL-142
265	chr3L	15819306	15819434	pogo	7	2100	15	128	'9-6	68.15	3.6	3.3	3` UTR	Dcp2 -	chr3L_15_15815001	chr3L_15815001	0.60	RAL-142
266	chr3L	15968165	15968283	P-element	10	4	42	118	'21-21	47.48	6.4	5.7	intergenic	CG10516 +,l(3)72Ab -	chr3L_42_15965001	chr3L_15965001	0.50	RAL-142
267	chr3L	16046862	16046970	P-element	19	2883	13	108	'8-5	46.25	2.3	3.9	intron	th -	chr3L_13_16045001	chr3L_16045001	0.62	RAL-142
268	chr3L	16258895	16259030	Transpac	3	5226	13	135	'5-8	65.91	3.9	2.7	intergenic	CG13053 -	chr3L_13_16255001	chr3L_16255001	0.38	RAL-142
269	chr3L	16291809	16291867	jockey	4761	4809	16	58	'6-10	63.85	5.2	2.6	intergenic	not near genes	chr3L_16_16290001	chr3L_16290001	0.38	RAL-142
270	chr3L	16301053	16301148	mdg1	7060	7426	16	95	'4-12	59.56	3.4	3.6	intergenic	CG4982 +	chr3L_16_16300001	chr3L_16300001	0.25	RAL-142
271	chr3L	16496179	16496286	P-element	2	2870	24	107	'11-13	49.09	6.9	3.0	intron,5` UTR,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_24_16495001	chr3L_16495001	0.46	RAL-142
272	chr3L	16496655	16496803	hobo	2937	1	13	148	'3-10	66.06	3.3	3.0	intron	CG43373 -	chr3L_13_16495001	chr3L_16495001	0.23	RAL-142
273	chr3L	16681977	16682103	FB	16	1	15	126	'8-7	65.42	2.6	4.2	intron,intron	Lasp -,CG43954 -	chr3L_15_16680001	chr3L_16680001	0.53	RAL-142
274	chr3L	16727146	16727256	springer	7152	7503	12	110	'7-5	61.04	3.6	2.6	exon	PGRP-SB2 +	chr3L_12_16725001	chr3L_16725001	0.58	RAL-142
275	chr3L	16875744	16875781	jockey	4607	4570	11	37	'6-5	59.80	2.7	3.0	intron	Lmpt +	chr3L_11_16875001	chr3L_16875001	0.55	RAL-142
276	chr3L	17153560	17153654	297	3	6969	10	94	'4-6	69.73	3.6	2.2	intron	Rbp6 -	chr3L_10_17150001	chr3L_17150001	0.40	RAL-142
277	chr3L	17220644	17220794	opus	7115	497	31	150	'7-24	66.09	4.3	5.8	intron	Rbp6 -	chr3L_31_17220001	chr3L_17220001	0.23	RAL-142
278	chr3L	17405657	17405777	roo	9067	8686	25	120	'16-9	68.35	4.6	4.5	intron	blot -	chr3L_25_17405001	chr3L_17405001	0.64	RAL-142
279	chr3L	17490625	17490747	roo	8674	392	17	122	'6-11	64.05	3.0	4.2	intron	Oatp74D +	chr3L_17_17490001	chr3L_17490001	0.35	RAL-142
280	chr3L	17530101	17530217	Tirant	403	6	25	116	'10-15	65.32	5.3	4.0	3` UTR,5` UTR	CR45165 -,Nedd4 +	chr3L_25_17530001	chr3L_17530001	0.40	RAL-142
281	chr3L	17595271	17595336	jockey	4672	4700	15	65	'9-6	67.51	6.6	2.0	intron	Eip74EF -	chr3L_15_17595001	chr3L_17595001	0.60	RAL-142
282	chr3L	17706351	17706454	Juan	4202	3	16	103	'10-6	64.98	6.2	2.2	intron	Ccn +	chr3L_16_17705001	chr3L_17705001	0.62	RAL-142
283	chr3L	17718965	17719087	297	12	6959	15	122	'7-8	66.77	4.1	2.9	intron	Ccn +	chr3L_15_17715001	chr3L_17715001	0.47	RAL-142
284	chr3L	17786861	17787091	pogo	58	20	8	230	'1-7	65.26	3.4	1.8	intergenic	not near genes	chr3L_8_17785001	chr3L_17785001	0.12	RAL-142
285	chr3L	18030369	18030474	Tirant	388	8113	5	105	'4-1	71.34	2.7	1.4	intron	Eip75B -	chr3L_5_18030001	chr3L_18030001	0.80	RAL-142
286	chr3L	18030789	18030891	Tirant	8483	13	10	102	'6-4	65.72	2.4	2.9	intron	Eip75B -	chr3L_10_18030001	chr3L_18030001	0.60	RAL-142
287	chr3L	18072705	18072827	412	476	12	26	122	'8-18	64.11	3.9	5.3	exon	CG44004 -	chr3L_26_18070001	chr3L_18070001	0.31	RAL-142
288	chr3L	18095470	18095600	I-element	5346	6	13	130	'5-8	66.61	1.7	4.8	intron	CG13698 -	chr3L_13_18095001	chr3L_18095001	0.38	RAL-142
289	chr3L	18347966	18348084	ZAM	435	11	9	118	'3-6	62.35	2.0	3.0	intergenic	not near genes	chr3L_9_18345001	chr3L_18345001	0.33	RAL-142
290	chr3L	18463324	18463525	gypsy5	297	6947	14	201	'5-9	63.85	2.3	4.2	intergenic	CG4306 -	chr3L_14_18460001	chr3L_18460001	0.36	RAL-142
291	chr3L	18505731	18505776	jockey	33	12	5	45	'1-4	64.23	3.5	1.1	intergenic	not near genes	chr3L_5_18505001	chr3L_18505001	0.20	RAL-142
292	chr3L	18687527	18687628	F-element	4673	4318	8	101	'1-7	51.65	5.8	1.2	intergenic	not near genes	chr3L_8_18685001	chr3L_18685001	0.12	RAL-142
293	chr3L	18743366	18743677	pogo	9	2083	11	311	'10-1	66.70	1.5	4.4	intergenic	not near genes	chr3L_11_18740001	chr3L_18740001	0.91	RAL-142
294	chr3L	18915115	18915249	412	12	7541	28	134	'16-12	64.83	8.9	2.8	intergenic	not near genes	chr3L_28_18915001	chr3L_18915001	0.57	RAL-142
295	chr3L	19063418	19063531	P-element	2881	2881	19	113	'11-8	41.04	5.7	2.8	5` UTR	CG6812 +	chr3L_19_19060001	chr3L_19060001	0.58	RAL-142
296	chr3L	19339316	19339443	Tc1	1636	5	10	127	'1-9	64.55	4.7	1.8	intergenic	not near genes	chr3L_10_19335001	chr3L_19335001	0.10	RAL-142
297	chr3L	19347200	19347247	jockey	4971	4973	20	47	'8-12	59.42	6.9	2.5	intron	CG32206 -	chr3L_20_19345001	chr3L_19345001	0.40	RAL-142
298	chr3L	19457153	19457191	jockey	36	12	6	38	'3-3	62.06	6.9	0.8	intergenic	not near genes	chr3L_6_19455001	chr3L_19455001	0.50	RAL-142
299	chr3L	19948840	19948942	3S18	313	5771	25	102	'3-22	62.29	4.3	4.7	intron	Ac76E +	chr3L_25_19945001	chr3L_19945001	0.12	RAL-142
300	chr3L	19951168	19951269	Ivk	9	5345	12	101	'9-3	62.83	3.5	2.7	intron	Ac76E +	chr3L_12_19950001	chr3L_19950001	0.75	RAL-142
301	chr3L	20039839	20039898	Doc	16	4	16	59	'12-4	59.46	8.8	1.6	intergenic	not near genes	chr3L_16_20035001	chr3L_20035001	0.75	RAL-142
302	chr3L	20139703	20139794	mdg3	222	5283	12	91	'7-5	59.89	4.4	2.2	exon	CG7328 -	chr3L_12_20135001	chr3L_20135001	0.58	RAL-142
303	chr3L	20167894	20168032	412	9	7542	21	138	'18-3	67.76	5.7	3.1	intron	CG42674 -	chr3L_21_20165001	chr3L_20165001	0.86	RAL-142
304	chr3L	20187375	20187465	FB	464	734	9	90	'7-2	65.52	11.5	0.7	intron	CG42674 -	chr3L_9_20185001	chr3L_20185001	0.78	RAL-142
305	chr3L	20642663	20642763	roo	408	8685	11	100	'8-3	61.18	1.8	3.9	intergenic	not near genes	chr3L_11_20640001	chr3L_20640001	0.73	RAL-142
306	chr3L	20896929	20897065	Tabor	9	7293	6	136	'1-5	53.26	1.4	2.5	3` UTR	Sfp77F -	chr3L_6_20895001	chr3L_20895001	0.17	RAL-142
307	chr3L	21103461	21103524	Doc	35	8	9	63	'5-4	63.92	7.2	1.1	intron	ko -	chr3L_9_21100001	chr3L_21100001	0.56	RAL-142
308	chr3L	21403543	21403730	roo	8	9067	12	187	'8-4	67.24	3.0	3.0	intron	rgn +	chr3L_12_21400001	chr3L_21400001	0.67	RAL-142
309	chr3L	21821415	21821521	Tc3	315	315	4	106	'2-2	73.48	6.5	0.5	intergenic	not near genes	chr3L_4_21820001	chr3L_21820001	0.50	RAL-142
310	chr3L	22108064	22108203	Transpac	309	2	33	139	'8-25	65.62	6.2	4.6	intergenic	not near genes	chr3L_33_22105001	chr3L_22105001	0.24	RAL-142
311	chr3L	22399745	22399833	FB	37	1	8	88	'4-4	67.04	4.1	1.6	intron	Ten-m -	chr3L_8_22395001	chr3L_22395001	0.50	RAL-142
312	chr3L	22744685	22744729	FB	65	21	8	44	'3-5	73.06	4.5	1.5	intron	CG7369 +	chr3L_8_22740001	chr3L_22740001	0.38	RAL-142
313	chr3L	23146473	23146515	1360	17	47	8	42	'2-6	68.73	3.7	1.7	intergenic	not near genes	chr3L_8_23145001	chr3L_23145001	0.25	RAL-142
314	chr3L	23236475	23236606	Stalker2	394	7259	27	131	'13-14	63.20	6.0	3.9	intron	nAChRalpha4 +	chr3L_27_23235001	chr3L_23235001	0.48	RAL-142
315	chr3L	23257459	23257596	blood	7	7382	13	137	'7-6	64.18	3.2	3.1	intron	nAChRalpha4 +	chr3L_13_23255001	chr3L_23255001	0.54	RAL-142
316	chr3L	25272512	25272572	1360	10	87	4	60	'1-3	65.81	1.9	1.4	intron	CG40467 -	chr3L_4_25270001	chr3L_25270001	0.25	RAL-142
317	chr3L	25414150	25414270	blood	7389	7017	15	120	'8-7	62.87	2.4	4.4	intergenic	not near genes	chr3L_15_25410001	chr3L_25410001	0.53	RAL-142
318	chr3L	25442526	25442556	Chimpo	35	2	4	30	'1-3	61.36	1.9	1.4	intergenic	not near genes	chr3L_4_25440001	chr3L_25440001	0.25	RAL-142
319	chr3L	25455079	25455137	HMS-Beagle2	1	54	16	58	'6-10	66.07	8.6	1.7	intergenic	not near genes	chr3L_16_25455001	chr3L_25455001	0.38	RAL-142
320	chr3L	26722645	26722680	Tc1-2	1542	1577	5	35	'4-1	63.18	5.5	0.8	intergenic	not near genes	chr3L_5_26720001	chr3L_26720001	0.80	RAL-142
321	chr3L	27174892	27174972	pogo	2082	50	7	80	'4-3	71.39	2.7	1.9	intergenic	not near genes	chr3L_7_27170001	chr3L_27170001	0.57	RAL-142
322	chr3R	563937	563990	HMS-Beagle	6850	6799	11	53	'4-7	67.03	5.3	1.7	intergenic	not near genes	chr3R_11_560001	chr3R_560001	0.36	RAL-142
323	chr3R	902548	902598	R1A1-element	9	5296	10	50	'6-4	64.84	5.5	1.5	intron	CG42621 +	chr3R_10_900001	chr3R_900001	0.60	RAL-142
324	chr3R	1023405	1023441	F-element	63	16	7	36	'5-2	63.50	3.4	1.6	intergenic	not near genes	chr3R_7_1020001	chr3R_1020001	0.71	RAL-142
325	chr3R	1220300	1220404	copia	233	4891	5	104	'2-3	59.05	0.8	2.8	intergenic	not near genes	chr3R_5_1220001	chr3R_1220001	0.40	RAL-142
326	chr3R	1704530	1704588	Max-element	285	8253	5	58	'3-2	64.03	4.4	0.9	intergenic	not near genes	chr3R_5_1700001	chr3R_1700001	0.60	RAL-142
327	chr3R	2275571	2275688	opus	27	7498	12	117	'2-10	71.24	3.3	2.8	intergenic	not near genes	chr3R_12_2275001	chr3R_2275001	0.17	RAL-142
328	chr3R	3375476	3375514	opus	7495	7500	5	38	'3-2	71.08	5.2	0.8	intergenic	not near genes	chr3R_5_3375001	chr3R_3375001	0.60	RAL-142
329	chr3R	4305268	4305380	roo	8680	9045	10	112	'4-6	63.59	1.6	3.8	intergenic	not near genes	chr3R_10_4305001	chr3R_4305001	0.40	RAL-142
330	chr3R	4514509	4514631	Tabor	22	480	7	122	'4-3	63.46	1.9	2.4	intron	CG34357 -	chr3R_7_4510001	chr3R_4510001	0.57	RAL-142
331	chr3R	4549201	4549326	1731	308	4330	6	125	'3-3	67.43	2.4	1.8	intron	CG34357 -	chr3R_6_4545001	chr3R_4545001	0.50	RAL-142
332	chr3R	4553304	4553389	Juan	4206	45	9	85	'6-3	63.13	0.2	7.5	intron	CG34357 -	chr3R_9_4550001	chr3R_4550001	0.67	RAL-142
333	chr3R	4554293	4554407	Bari1	1706	5	8	114	'1-7	65.64	2.0	2.7	intron	CG34357 -	chr3R_8_4550001	chr3R_4550001	0.12	RAL-142
334	chr3R	5219188	5219245	Doc	7	7	14	57	'7-7	64.67	11.2	1.1	intron	Prosbeta2R2 -	chr3R_14_5215001	chr3R_5215001	0.50	RAL-142
335	chr3R	5671357	5671490	1360	3385	3378	29	133	'17-12	66.67	4.5	5.3	intron	Atg17 +	chr3R_29_5670001	chr3R_5670001	0.59	RAL-142
336	chr3R	5774804	5774918	I-element	5346	1	24	114	'13-11	67.18	5.3	3.8	intron	CG2082 -	chr3R_24_5770001	chr3R_5770001	0.54	RAL-142
337	chr3R	5910658	5910782	roo	13	402	24	124	'5-19	64.49	3.7	5.1	intron	CG34113 -	chr3R_24_5910001	chr3R_5910001	0.21	RAL-142
338	chr3R	6088510	6088651	transib2	4	2818	23	141	'15-8	64.15	3.2	5.5	intergenic	Gasp -	chr3R_23_6085001	chr3R_6085001	0.65	RAL-142
339	chr3R	6132015	6132139	I-element	4	5347	28	124	'18-10	61.41	4.2	5.4	intergenic	not near genes	chr3R_28_6130001	chr3R_6130001	0.64	RAL-142
340	chr3R	6263268	6263397	diver	216	13	28	129	'15-13	64.63	7.1	3.5	intergenic	not near genes	chr3R_28_6260001	chr3R_6260001	0.54	RAL-142
341	chr3R	6309768	6309810	F-element	11	39	8	42	'3-5	50.57	8.3	0.9	intergenic	CG31560 +,CG31556 -	chr3R_8_6305001	chr3R_6305001	0.38	RAL-142
342	chr3R	6763653	6763700	F-element	4485	4438	14	47	'9-5	61.70	8.9	1.4	intron	Ama +	chr3R_14_6760001	chr3R_6760001	0.64	RAL-142
343	chr3R	6966414	6966541	pogo	2080	7	9	127	'2-7	67.41	2.1	2.9	intron	Antp -	chr3R_9_6965001	chr3R_6965001	0.22	RAL-142
344	chr3R	7049607	7049733	1360	3388	3367	30	126	'23-7	65.48	6.7	3.9	intergenic	not near genes	chr3R_30_7045001	chr3R_7045001	0.77	RAL-142
345	chr3R	7171234	7171354	297	378	6580	11	120	'5-6	67.97	3.9	2.2	intron	sas +	chr3R_11_7170001	chr3R_7170001	0.45	RAL-142
346	chr3R	7436610	7436665	springer	41	7138	6	55	'3-3	65.83	3.8	1.2	intergenic	not near genes	chr3R_6_7435001	chr3R_7435001	0.50	RAL-142
347	chr3R	7500878	7500939	FB	57	27	17	61	'4-13	63.39	7.9	1.9	intron	alpha-Est9 -	chr3R_17_7500001	chr3R_7500001	0.24	RAL-142
348	chr3R	7588829	7588882	F-element	14	63	16	53	'6-10	67.70	10.0	1.5	intron	CG34127 -	chr3R_16_7585001	chr3R_7585001	0.38	RAL-142
349	chr3R	7833091	7833126	Doc	15	50	9	35	'5-4	65.39	11.0	0.8	intron	CG34384 +	chr3R_9_7830001	chr3R_7830001	0.56	RAL-142
350	chr3R	7874796	7874904	jockey	4673	4987	21	108	'12-9	58.82	7.5	2.5	intron	CG17816 -	chr3R_21_7870001	chr3R_7870001	0.57	RAL-142
351	chr3R	8451724	8451767	X-element	4662	4705	9	43	'4-5	60.42	3.0	2.2	intron	CG45263 -	chr3R_9_8450001	chr3R_8450001	0.44	RAL-142
352	chr3R	8621711	8621763	jockey	35	17	13	52	'9-4	63.92	7.5	1.5	intron	5-HT2B +	chr3R_13_8620001	chr3R_8620001	0.69	RAL-142
353	chr3R	8811147	8811261	1360	15	3380	20	114	'14-6	67.03	2.9	5.1	intron	CG9837 -	chr3R_20_8810001	chr3R_8810001	0.70	RAL-142
354	chr3R	9284043	9284085	Rt1b	355	354	9	42	'5-4	62.84	8.9	0.9	intergenic	not near genes	chr3R_9_9280001	chr3R_9280001	0.56	RAL-142
355	chr3R	9339593	9339733	Burdock	6388	4	7	140	'4-3	67.44	1.8	2.5	3` UTR	CR43301 -	chr3R_7_9335001	chr3R_9335001	0.57	RAL-142
356	chr3R	9435786	9435891	roo	405	8687	31	105	'24-7	66.88	8.8	3.2	intron	ps +	chr3R_31_9435001	chr3R_9435001	0.77	RAL-142
357	chr3R	9481171	9481309	roo	8	404	28	138	'18-10	68.49	4.6	5.0	intron	CG16779 -	chr3R_28_9480001	chr3R_9480001	0.64	RAL-142
358	chr3R	10202951	10203093	roo	402	8663	19	142	'9-10	64.67	1.7	7.0	intron	Syn +	chr3R_19_10200001	chr3R_10200001	0.47	RAL-142
359	chr3R	10956163	10956294	hobo	2929	6	14	131	'4-10	65.55	4.2	2.7	intergenic	not near genes	chr3R_14_10955001	chr3R_10955001	0.29	RAL-142
360	chr3R	10964585	10964685	I-element	22	5338	18	100	'15-3	67.16	5.7	2.7	intergenic	not near genes	chr3R_18_10960001	chr3R_10960001	0.83	RAL-142
361	chr3R	11173231	11173308	Transpac	275	4931	6	77	'1-5	60.81	1.6	2.3	intergenic	Ugt86Dj -	chr3R_6_11170001	chr3R_11170001	0.17	RAL-142
362	chr3R	11315181	11315296	hopper	1407	1394	17	115	'11-6	63.44	4.9	2.9	intergenic	not near genes	chr3R_17_11315001	chr3R_11315001	0.65	RAL-142
363	chr3R	11474865	11474992	hopper	5	15	24	127	'17-7	67.48	6.7	3.1	intergenic	not near genes	chr3R_24_11470001	chr3R_11470001	0.71	RAL-142
364	chr3R	11526670	11526879	pogo	1864	16	14	209	'3-11	64.13	3.5	3.1	intergenic	not near genes	chr3R_14_11525001	chr3R_11525001	0.21	RAL-142
365	chr3R	11549787	11549819	297	6588	6620	4	32	'2-2	72.92	4.0	0.8	intergenic	not near genes	chr3R_4_11545001	chr3R_11545001	0.50	RAL-142
366	chr3R	11553633	11553730	hopper	1413	22	13	97	'9-4	63.73	6.7	1.7	intergenic	not near genes	chr3R_13_11550001	chr3R_11550001	0.69	RAL-142
367	chr3R	11937183	11937289	pogo	2081	2076	9	106	'4-5	62.01	3.1	2.2	intron	Cad87A -	chr3R_9_11935001	chr3R_11935001	0.44	RAL-142
368	chr3R	11957290	11957323	S-element	1556	1523	7	33	'5-2	63.86	0.7	4.1	intergenic	not near genes	chr3R_7_11955001	chr3R_11955001	0.71	RAL-142
369	chr3R	12039910	12040039	412	7070	7543	37	129	'19-18	65.64	7.5	4.4	intergenic	not near genes	chr3R_37_12035001	chr3R_12035001	0.51	RAL-142
370	chr3R	12040116	12040252	HMS-Beagle	13	243	40	136	'10-30	64.87	8.9	4.0	intergenic	CG14736 +	chr3R_40_12040001	chr3R_12040001	0.25	RAL-142
371	chr3R	12043032	12043089	jockey	15	20	5	57	'4-1	64.55	8.2	0.5	intron	CG14736 +	chr3R_5_12040001	chr3R_12040001	0.80	RAL-142
372	chr3R	12452917	12453031	roo	15	9051	13	114	'10-3	66.31	7.6	1.5	intron,exon	CG18549 +,CG5509 +	chr3R_13_12450001	chr3R_12450001	0.77	RAL-142
373	chr3R	12623667	12623817	roo	1	409	32	150	'21-11	66.18	5.7	4.8	intergenic	Vha55 -	chr3R_32_12620001	chr3R_12620001	0.66	RAL-142
374	chr3R	13183209	13183309	hobo	2925	1	10	100	'1-9	64.60	2.4	2.9	intergenic	not near genes	chr3R_10_13180001	chr3R_13180001	0.10	RAL-142
375	chr3R	13225470	13225586	hobo	3	2928	16	116	'8-8	61.99	4.5	2.9	intron	Ace -	chr3R_16_13225001	chr3R_13225001	0.50	RAL-142
376	chr3R	13423279	13423397	rover	6981	7294	18	118	'4-14	64.90	4.7	3.2	intergenic	Ir87a +	chr3R_18_13420001	chr3R_13420001	0.22	RAL-142
377	chr3R	13437142	13437370	hopper	2	1378	14	228	'11-3	61.97	5.3	2.2	intergenic	not near genes	chr3R_14_13435001	chr3R_13435001	0.79	RAL-142
378	chr3R	13481141	13481267	roo	399	8663	22	126	'8-14	66.16	4.8	3.8	intergenic	not near genes	chr3R_22_13480001	chr3R_13480001	0.36	RAL-142
379	chr3R	13502952	13503081	hopper	6	1399	19	129	'8-11	64.68	6.8	2.4	intergenic	not near genes	chr3R_19_13500001	chr3R_13500001	0.42	RAL-142
380	chr3R	13543833	13544023	1360	12	3371	18	190	'8-10	50.94	2.4	5.3	intergenic	CG31337 -	chr3R_18_13540001	chr3R_13540001	0.44	RAL-142
381	chr3R	13732929	13733049	hopper	13	14	20	120	'10-10	60.69	3.6	4.3	intron	CG34383 +	chr3R_20_13730001	chr3R_13730001	0.50	RAL-142
382	chr3R	14013368	14013446	roo	55	397	9	78	'2-7	63.96	2.8	2.4	intron	rdx -	chr3R_9_14010001	chr3R_14010001	0.22	RAL-142
383	chr3R	14139049	14139181	297	381	5	11	132	'5-6	65.03	1.8	3.9	intergenic	not near genes	chr3R_11_14135001	chr3R_14135001	0.45	RAL-142
384	chr3R	14357337	14357392	Rt1b	5121	5134	16	55	'10-6	65.60	8.5	1.7	intron	NK7.1 -	chr3R_16_14355001	chr3R_14355001	0.62	RAL-142
385	chr3R	14688240	14688353	pogo	2069	4	4	113	'1-3	67.89	0.4	2.9	intron	Meltrin -	chr3R_4_14685001	chr3R_14685001	0.25	RAL-142
386	chr3R	14703856	14703985	297	2	6964	11	129	'6-5	65.44	4.7	1.9	intron	kibra -	chr3R_11_14700001	chr3R_14700001	0.55	RAL-142
387	chr3R	14743170	14743224	FB	59	4	5	54	'2-3	62.04	6.2	0.7	intron	jvl +	chr3R_5_14740001	chr3R_14740001	0.40	RAL-142
388	chr3R	14995635	14995687	Doc	8	8	11	52	'2-9	50.68	9.9	1.0	intergenic	not near genes	chr3R_11_14995001	chr3R_14995001	0.18	RAL-142
389	chr3R	15309298	15309445	HMS-Beagle2	308	6883	26	147	'12-14	62.76	6.0	3.7	intergenic	not near genes	chr3R_26_15305001	chr3R_15305001	0.46	RAL-142
390	chr3R	15524368	15524482	pogo	4	2081	25	114	'12-13	63.11	7.7	2.9	intergenic	not near genes	chr3R_25_15520001	chr3R_15520001	0.48	RAL-142
391	chr3R	15697006	15697133	3S18	5774	6090	18	127	'15-3	65.29	4.7	3.2	3` UTR	CG5399 +	chr3R_18_15695001	chr3R_15695001	0.83	RAL-142
392	chr3R	16194486	16194585	flea	5003	23	9	99	'7-2	66.83	3.9	1.8	intron	sra +	chr3R_9_16190001	chr3R_16190001	0.78	RAL-142
393	chr3R	16349188	16349274	P-element	2886	2	8	86	'5-3	50.94	2.4	2.4	5` UTR	CG14879 -	chr3R_8_16345001	chr3R_16345001	0.62	RAL-142
394	chr3R	17271971	17272049	hopper	49	1402	13	78	'4-9	68.13	2.0	4.3	intergenic	not near genes	chr3R_13_17270001	chr3R_17270001	0.31	RAL-142
395	chr3R	17419750	17419791	I-element	5331	5344	8	41	'5-3	63.28	5.0	1.3	intergenic	CG42834 +	chr3R_8_17415001	chr3R_17415001	0.62	RAL-142
396	chr3R	17436872	17436934	mdg3	247	5263	10	62	'6-4	66.66	7.3	1.2	intron	CG5873 +	chr3R_10_17435001	chr3R_17435001	0.60	RAL-142
397	chr3R	17619491	17619589	412	36	486	13	98	'7-6	64.50	5.3	2.1	exon	CG14326 +	chr3R_13_17615001	chr3R_17615001	0.54	RAL-142
398	chr3R	17673728	17673848	FB	6	10	21	120	'10-11	62.90	4.3	4.0	exon	ald +	chr3R_21_17670001	chr3R_17670001	0.48	RAL-142
399	chr3R	17777549	17777688	Burdock	4	6382	23	139	'11-12	64.63	5.6	3.5	intron	CG43102 -	chr3R_23_17775001	chr3R_17775001	0.48	RAL-142
400	chr3R	17927484	17927534	jockey	4936	4986	8	50	'6-2	63.81	0.8	4.4	intron	cpo +	chr3R_8_17925001	chr3R_17925001	0.75	RAL-142
401	chr3R	18202274	18202331	jockey	4730	4669	7	57	'4-3	68.19	4.0	1.4	intron	CG7985 +	chr3R_7_18200001	chr3R_18200001	0.57	RAL-142
402	chr3R	18576894	18577001	copia	232	20	8	107	'3-5	61.34	1.2	3.6	intron,intron	CG7694 +,fray +	chr3R_8_18575001	chr3R_18575001	0.38	RAL-142
403	chr3R	18626846	18626909	roo	34	8666	8	63	'4-4	68.87	0.0	8.0	intron	qin +	chr3R_8_18625001	chr3R_18625001	0.50	RAL-142
404	chr3R	18769671	18769783	roo	8676	387	14	112	'9-5	68.29	2.8	3.7	intron	CG7720 -	chr3R_14_18765001	chr3R_18765001	0.64	RAL-142
405	chr3R	18851062	18851098	flea	37	4758	4	36	'3-1	65.23	5.4	0.6	3` UTR	CR45633 -	chr3R_4_18850001	chr3R_18850001	0.75	RAL-142
406	chr3R	19058339	19058479	Burdock	6140	247	18	140	'13-5	62.91	5.4	2.8	intron	cdi -	chr3R_18_19055001	chr3R_19055001	0.72	RAL-142
407	chr3R	19949127	19949209	copia	4918	237	8	82	'4-4	66.03	1.3	3.5	intron	Hs6st -	chr3R_8_19945001	chr3R_19945001	0.50	RAL-142
408	chr3R	19996493	19996675	copia	225	257	9	182	'1-8	58.88	1.4	3.8	intron	Hs6st -	chr3R_9_19995001	chr3R_19995001	0.11	RAL-142
409	chr3R	20119525	20119634	rover	327	6972	10	109	'3-7	66.80	2.4	2.9	intergenic	not near genes	chr3R_10_20115001	chr3R_20115001	0.30	RAL-142
410	chr3R	20415738	20415792	F-element	20	70	10	54	'5-5	60.90	9.6	0.9	intron	Gfrl -	chr3R_10_20415001	chr3R_20415001	0.50	RAL-142
411	chr3R	20703178	20703291	flea	4973	4767	8	113	'5-3	63.93	2.4	2.4	intron	Oamb -	chr3R_8_20700001	chr3R_20700001	0.62	RAL-142
412	chr3R	21612761	21612994	jockey	4938	6	17	233	'2-15	64.50	5.4	2.7	intron	InR -	chr3R_17_21610001	chr3R_21610001	0.12	RAL-142
413	chr3R	21858664	21858769	Tirant	8112	8483	6	105	'4-2	65.10	3.8	1.2	intergenic	not near genes	chr3R_6_21855001	chr3R_21855001	0.67	RAL-142
414	chr3R	21907271	21907536	I-element	4919	4894	25	265	'1-24	43.83	5.8	3.7	intergenic	CG6678 +	chr3R_25_21905001	chr3R_21905001	0.04	RAL-142
415	chr3R	21993191	21993236	jockey	4976	4931	23	45	'7-16	64.89	12.1	1.8	intron	Eip93F +	chr3R_23_21990001	chr3R_21990001	0.30	RAL-142
416	chr3R	22500790	22500890	invader3	5455	1	26	100	'11-15	61.73	5.4	4.1	intron	Octbeta1R +	chr3R_26_22500001	chr3R_22500001	0.42	RAL-142
417	chr3R	22594520	22594687	accord	177	7038	4	167	'1-3	73.94	9.6	0.4	intron	Efa6 +	chr3R_4_22590001	chr3R_22590001	0.25	RAL-142
418	chr3R	22595781	22595887	FB	10	1	19	106	'11-8	66.20	3.9	3.9	intron	Efa6 +	chr3R_19_22595001	chr3R_22595001	0.58	RAL-142
419	chr3R	22979307	22979427	Juan	4076	4197	22	120	'14-8	65.11	3.4	5.0	intergenic	not near genes	chr3R_22_22975001	chr3R_22975001	0.64	RAL-142
420	chr3R	23020804	23020988	INE-1	578	561	9	184	'8-1	54.33	4.9	1.5	intergenic	lmd -	chr3R_9_23020001	chr3R_23020001	0.89	RAL-142
421	chr3R	23620953	23621073	roo	5	394	27	120	'14-13	66.13	2.1	8.7	intron	CG31145 -	chr3R_27_23620001	chr3R_23620001	0.52	RAL-142
422	chr3R	23653378	23653455	pogo	2083	50	4	77	'3-1	63.57	2.6	1.1	intron	CG31145 -	chr3R_4_23650001	chr3R_23650001	0.75	RAL-142
423	chr3R	23665003	23665112	1360	36	3385	15	109	'7-8	67.57	3.8	3.1	intron	CG31145 -	chr3R_15_23665001	chr3R_23665001	0.47	RAL-142
424	chr3R	23722218	23722333	Burdock	9	6366	4	115	'3-1	68.37	2.6	1.1	intergenic	not near genes	chr3R_4_23720001	chr3R_23720001	0.75	RAL-142
425	chr3R	23729961	23730080	Burdock	251	6145	20	119	'4-16	66.86	2.3	6.1	exon	CG10365 +	chr3R_20_23725001	chr3R_23725001	0.20	RAL-142
426	chr3R	23861036	23861169	pogo	2099	18	35	133	'23-12	66.80	11.9	2.7	3` UTR	Pli -	chr3R_35_23860001	chr3R_23860001	0.66	RAL-142
427	chr3R	23891571	23891599	INE-1	111	83	5	28	'3-2	62.48	3.5	1.1	intergenic	tbrd-1 -	chr3R_5_23890001	chr3R_23890001	0.60	RAL-142
428	chr3R	23943179	23943237	P-element	10	42	14	58	'8-6	42.84	6.2	1.9	intergenic	Gdh -,CG12268 -	chr3R_14_23940001	chr3R_23940001	0.57	RAL-142
429	chr3R	24260844	24260983	roo	9068	7	24	139	'18-6	69.25	4.1	4.7	intron	jar -	chr3R_24_24260001	chr3R_24260001	0.75	RAL-142
430	chr3R	24813914	24814048	P-element	2882	2881	29	134	'17-12	43.70	5.0	4.8	5` UTR	CG5807 -	chr3R_29_24810001	chr3R_24810001	0.59	RAL-142
431	chr3R	24867462	24867592	roo	9060	8	37	130	'21-16	68.58	7.2	4.5	3` UTR	Ela +	chr3R_37_24865001	chr3R_24865001	0.57	RAL-142
432	chr3R	25051555	25051681	17.6	482	6943	26	126	'19-7	66.14	4.3	4.9	exon	CG11791 +	chr3R_26_25050001	chr3R_25050001	0.73	RAL-142
433	chr3R	25163095	25163224	mdg1	7049	7452	9	129	'3-6	64.58	3.6	2.0	intergenic	not near genes	chr3R_9_25160001	chr3R_25160001	0.33	RAL-142
434	chr3R	25434712	25434851	opus	7499	10	28	139	'16-12	64.95	7.5	3.3	intron	Fur1 -	chr3R_28_25430001	chr3R_25430001	0.57	RAL-142
435	chr3R	25702155	25702273	Tirant	8502	5	10	118	'7-3	69.48	1.4	4.2	intron	LpR2 -	chr3R_10_25700001	chr3R_25700001	0.70	RAL-142
436	chr3R	25737744	25737887	S-element	7	3	6	143	'1-5	70.03	3.9	1.2	intron	LpR2 -	chr3R_6_25735001	chr3R_25735001	0.17	RAL-142
437	chr3R	25859571	25859705	297	6972	4	13	134	'9-4	66.33	3.4	3.0	intron	CG5890 +	chr3R_13_25855001	chr3R_25855001	0.69	RAL-142
438	chr3R	26398901	26398960	Doc	49	1	15	59	'6-9	61.12	6.6	2.0	intergenic	not near genes	chr3R_15_26395001	chr3R_26395001	0.40	RAL-142
439	chr3R	26733965	26734077	hobo	9	2929	21	112	'13-8	61.13	7.7	2.4	intergenic	not near genes	chr3R_21_26730001	chr3R_26730001	0.62	RAL-142
440	chr3R	26775927	26775966	Rt1a	27	20	14	39	'6-8	58.17	4.5	2.5	intergenic	not near genes	chr3R_14_26775001	chr3R_26775001	0.43	RAL-142
441	chr3R	27071827	27071950	jockey	4673	4986	38	123	'15-23	64.03	8.8	3.9	intergenic	not near genes	chr3R_38_27070001	chr3R_27070001	0.39	RAL-142
442	chr3R	27795419	27795522	roo	4	9029	9	103	'6-3	69.87	5.1	1.5	intron	CG34353 -	chr3R_9_27795001	chr3R_27795001	0.67	RAL-142
443	chr3R	27816084	27816218	Burdock	6146	244	7	134	'5-2	63.36	2.2	2.2	intron	CG34353 -	chr3R_7_27815001	chr3R_27815001	0.71	RAL-142
444	chr3R	28224727	28224853	flea	5003	13	7	126	'4-3	67.14	2.7	1.9	intron	CG34354 +	chr3R_7_28220001	chr3R_28220001	0.57	RAL-142
445	chr3R	28639897	28640019	mdg1	7063	418	21	122	'3-18	67.44	2.5	6.0	intergenic	not near genes	chr3R_21_28635001	chr3R_28635001	0.14	RAL-142
446	chr3R	28847861	28848021	Tc3	237	237	11	160	'7-4	63.89	4.0	2.2	intron	spg +	chr3R_11_28845001	chr3R_28845001	0.64	RAL-142
447	chr3R	29345600	29345687	roo	8683	9037	11	87	'7-4	62.94	6.5	1.5	intergenic	not near genes	chr3R_11_29345001	chr3R_29345001	0.64	RAL-142
448	chr3R	29362829	29362875	F-element	4622	4668	10	46	'8-2	67.83	5.5	1.5	intergenic	not near genes	chr3R_10_29360001	chr3R_29360001	0.80	RAL-142
449	chr3R	29635171	29635282	mdg1	411	19	20	111	'16-4	67.75	9.7	1.9	intron	Dop1R2 -	chr3R_20_29635001	chr3R_29635001	0.80	RAL-142
450	chr3R	29970551	29970606	pogo	50	2	9	55	'3-6	69.72	3.8	1.9	intergenic	not near genes	chr3R_9_29970001	chr3R_29970001	0.33	RAL-142
451	chr3R	30298308	30298417	copia	31	258	5	109	'1-4	63.74	0.9	2.6	intron	hdc +	chr3R_5_30295001	chr3R_30295001	0.20	RAL-142
452	chr3R	30369637	30369773	roo	9064	8672	14	136	'3-11	64.28	4.7	2.5	3` UTR	hdc +	chr3R_14_30365001	chr3R_30365001	0.21	RAL-142
453	chr3R	30859355	30859530	Burdock	257	4	11	175	'3-8	58.42	1.1	5.2	intergenic	not near genes	chr3R_11_30855001	chr3R_30855001	0.27	RAL-142
454	chr3R	31458500	31458554	jockey	20	18	13	54	'6-7	64.36	6.0	1.9	3` UTR	lox -	chr3R_13_31455001	chr3R_31455001	0.46	RAL-142
455	chr3R	31633105	31633237	opus	497	16	31	132	'22-9	64.90	11.7	2.4	intron	kek6 +	chr3R_31_31630001	chr3R_31630001	0.71	RAL-142
456	chr3R	31965115	31965286	1360	14	3387	8	171	'5-3	61.95	2.1	2.6	intron	heph -	chr3R_8_31965001	chr3R_31965001	0.62	RAL-142
457	chr4	311166	311207	1360	3251	3355	5	41	'3-2	65.66	0.6	3.1	3` UTR	Zip102B -	chr4_5_310001	chr4_310001	0.60	RAL-142
458	chr4	311577	311620	1360	50	7	6	43	'5-1	63.56	1.8	2.1	3` UTR	Zip102B -	chr4_6_310001	chr4_310001	0.83	RAL-142
459	chrX	711730	711835	297	6585	6958	8	105	'5-3	64.51	1.2	3.6	intron	sdk +	chrX_8_710001	chrX_710001	0.62	RAL-142
460	chrX	1503320	1503351	roo	8674	8678	7	31	'1-6	66.72	9.3	0.7	intron,intron	inc +,Nmdar2 -	chrX_7_1500001	chrX_1500001	0.14	RAL-142
461	chrX	1523570	1523625	jockey	64	9	13	55	'5-8	67.89	5.6	2.0	intergenic	not near genes	chrX_13_1520001	chrX_1520001	0.38	RAL-142
462	chrX	1599384	1599472	hopper	1378	1414	12	88	'4-8	66.68	4.3	2.3	intron,intron	Mur2B -,br +	chrX_12_1595001	chrX_1595001	0.33	RAL-142
463	chrX	1601057	1601102	hopper	1402	5	11	45	'4-7	64.08	5.0	1.8	intron,intron	Mur2B -,br +	chrX_11_1600001	chrX_1600001	0.36	RAL-142
464	chrX	2552004	2552163	blood	379	7011	11	159	'10-1	67.25	5.3	1.7	intergenic	Pdfr +	chrX_11_2550001	chrX_2550001	0.91	RAL-142
465	chrX	2867482	2867576	297	371	6592	4	94	'3-1	66.31	1.5	1.6	intron	kirre +	chrX_4_2865001	chrX_2865001	0.75	RAL-142
466	chrX	3091897	3092044	opus	7494	7115	18	147	'9-9	65.88	4.8	3.1	intron	kirre +	chrX_18_3090001	chrX_3090001	0.50	RAL-142
467	chrX	3528534	3528671	roo	8670	401	19	137	'7-12	68.91	5.2	3.1	intron	CG32791 -	chrX_19_3525001	chrX_3525001	0.37	RAL-142
468	chrX	4216602	4216648	I-element	5294	5340	7	46	'4-3	60.90	3.5	1.6	intergenic	CG15571 -	chrX_7_4215001	chrX_4215001	0.57	RAL-142
469	chrX	4262942	4263061	Tirant	8501	5	17	119	'11-6	68.74	6.3	2.3	intergenic	not near genes	chrX_17_4260001	chrX_4260001	0.65	RAL-142
470	chrX	4712432	4712464	Quasimodo	12	10	7	32	'3-4	69.00	7.6	0.8	intron	Proc-R +	chrX_7_4710001	chrX_4710001	0.43	RAL-142
471	chrX	4789117	4789244	opus	493	5	13	127	'8-5	65.78	6.8	1.7	intergenic	not near genes	chrX_13_4785001	chrX_4785001	0.62	RAL-142
472	chrX	5018676	5018813	roo	405	8675	11	137	'4-7	68.69	2.4	3.2	intron	CR44833 -	chrX_11_5015001	chrX_5015001	0.36	RAL-142
473	chrX	5513360	5513424	jockey	4750	4686	8	64	'4-4	68.90	6.0	1.1	intergenic	not near genes	chrX_8_5510001	chrX_5510001	0.50	RAL-142
474	chrX	5515505	5515642	copia	257	5	20	137	'5-15	67.93	2.0	6.7	intergenic	not near genes	chrX_20_5515001	chrX_5515001	0.25	RAL-142
475	chrX	5859362	5859420	BS	49	17	11	58	'6-5	64.79	7.2	1.3	intergenic	not near genes	chrX_11_5855001	chrX_5855001	0.55	RAL-142
476	chrX	6866740	6866881	S-element	1700	1715	13	141	'7-6	58.57	4.1	2.5	intron	CG14434 -	chrX_13_6865001	chrX_6865001	0.54	RAL-142
477	chrX	7677103	7677144	jockey	4693	4666	6	41	'3-3	58.89	2.8	1.6	3` UTR	ct +	chrX_6_7675001	chrX_7675001	0.50	RAL-142
478	chrX	7802767	7802851	hobo	2710	6	10	84	'2-8	65.33	5.6	1.5	intergenic	not near genes	chrX_10_7800001	chrX_7800001	0.20	RAL-142
479	chrX	7992487	7992524	jockey	9	35	7	37	'2-5	60.80	9.7	0.7	intergenic	not near genes	chrX_7_7990001	chrX_7990001	0.29	RAL-142
480	chrX	8027426	8027512	Juan	4182	7	6	86	'4-2	62.84	4.4	1.1	intergenic	Tbh +	chrX_6_8025001	chrX_8025001	0.67	RAL-142
481	chrX	8279750	8279863	blood	7033	380	6	113	'4-2	65.35	3.1	1.5	3` UTR	nAChRalpha3 -	chrX_6_8275001	chrX_8275001	0.67	RAL-142
482	chrX	8326748	8326776	jockey	4706	4676	7	28	'6-1	66.66	1.6	2.7	intron	nAChRalpha3 -	chrX_7_8325001	chrX_8325001	0.86	RAL-142
483	chrX	8364718	8364762	jockey	4943	4978	10	44	'5-5	65.06	5.7	1.5	intron	nAChRalpha3 -	chrX_10_8360001	chrX_8360001	0.50	RAL-142
484	chrX	8518915	8519032	S-element	1702	1705	11	117	'7-4	63.64	2.7	3.0	intron	Nrg +	chrX_11_8515001	chrX_8515001	0.64	RAL-142
485	chrX	8808743	8808828	roo	9025	8680	8	85	'2-6	65.49	1.3	3.5	intergenic	not near genes	chrX_8_8805001	chrX_8805001	0.25	RAL-142
486	chrX	8885474	8885593	roo	23	401	9	119	'5-4	68.70	1.8	3.2	intron	Moe -	chrX_9_8885001	chrX_8885001	0.56	RAL-142
487	chrX	9213670	9213711	jockey	4821	4780	5	41	'3-2	62.61	7.5	0.6	intergenic	not near genes	chrX_5_9210001	chrX_9210001	0.60	RAL-142
488	chrX	9432795	9432914	roo	6	9046	20	119	'14-6	67.88	3.7	4.3	intron	mgl -	chrX_20_9430001	chrX_9430001	0.70	RAL-142
489	chrX	9522210	9522240	opus	7479	7495	6	30	'3-3	62.53	5.7	0.9	intron	CG32700 -	chrX_6_9520001	chrX_9520001	0.50	RAL-142
490	chrX	9576510	9576622	FB	9	13	15	112	'9-6	68.66	4.0	3.0	intron	CG32699 -	chrX_15_9575001	chrX_9575001	0.60	RAL-142
491	chrX	9642327	9642444	S-element	1712	1705	11	117	'3-8	67.94	5.0	1.8	intron	l(1)G0232 -	chrX_11_9640001	chrX_9640001	0.27	RAL-142
492	chrX	9845515	9845574	F-element	40	13	20	59	'12-8	64.37	8.8	2.0	intron	CG32698 +	chrX_20_9845001	chrX_9845001	0.60	RAL-142
493	chrX	10119533	10119648	FB	24	22	10	115	'6-4	57.57	1.4	4.2	intron,intron	RhoU +,CR44894 -	chrX_10_10115001	chrX_10115001	0.60	RAL-142
494	chrX	10300729	10300772	412	13	20	9	43	'5-4	66.72	10.0	0.8	intron	alpha-Man-I -	chrX_9_10300001	chrX_10300001	0.56	RAL-142
495	chrX	10433004	10433106	flea	234	11	5	102	'3-2	66.02	4.5	0.9	intron	CG32683 -	chrX_5_10430001	chrX_10430001	0.60	RAL-142
496	chrX	12145147	12145235	412	481	9	6	88	'1-5	62.68	2.2	1.9	intron	Ten-a +	chrX_6_12145001	chrX_12145001	0.17	RAL-142
497	chrX	12271455	12271576	pogo	10	2099	29	121	'17-12	68.45	2.4	8.5	intron	Ten-a +	chrX_29_12270001	chrX_12270001	0.59	RAL-142
498	chrX	13202570	13202698	Tirant	8122	8500	13	128	'5-8	63.66	5.2	2.1	intron	sno -	chrX_13_13200001	chrX_13200001	0.38	RAL-142
499	chrX	13495469	13495609	Max-element	3	8526	21	140	'12-9	61.26	4.8	3.6	intron	Neto +	chrX_21_13495001	chrX_13495001	0.57	RAL-142
500	chrX	14771695	14771802	jockey	4566	4978	11	107	'10-1	60.52	0.8	6.1	intergenic	not near genes	chrX_11_14770001	chrX_14770001	0.91	RAL-142
501	chrX	14827549	14827601	G2	3016	3060	16	52	'5-11	62.00	7.7	1.8	3` UTR	CG14408 -	chrX_16_14825001	chrX_14825001	0.31	RAL-142
502	chrX	14853393	14853470	P-element	52	2868	16	77	'5-11	49.75	6.6	2.1	intron	Flo2 +	chrX_16_14850001	chrX_14850001	0.31	RAL-142
503	chrX	14858878	14858976	297	6953	6593	6	98	'4-2	72.48	2.6	1.7	intron	Flo2 +	chrX_6_14855001	chrX_14855001	0.67	RAL-142
504	chrX	15026001	15026092	FB	46	29	12	91	'4-8	60.64	3.0	3.0	intron,intron	hiw -,be +	chrX_12_15025001	chrX_15025001	0.33	RAL-142
505	chrX	15043086	15043210	S-element	1708	5	18	124	'11-7	65.95	6.8	2.3	intron	hiw -	chrX_18_15040001	chrX_15040001	0.61	RAL-142
506	chrX	15046699	15046825	S-element	3	1706	4	126	'1-3	67.87	3.0	1.0	intron,intron	hiw -,CG5541 +	chrX_4_15045001	chrX_15045001	0.25	RAL-142
507	chrX	15169931	15170063	I-element	5349	2	15	132	'9-6	62.88	3.6	3.3	intergenic	not near genes	chrX_15_15165001	chrX_15165001	0.60	RAL-142
508	chrX	15202678	15202734	hopper	26	1394	7	56	'5-2	65.15	2.8	1.8	intergenic	not near genes	chrX_7_15200001	chrX_15200001	0.71	RAL-142
509	chrX	15227602	15227710	hopper	27	1399	15	108	'5-10	64.94	2.1	4.8	intergenic	not near genes	chrX_15_15225001	chrX_15225001	0.33	RAL-142
510	chrX	15499933	15500070	pogo	2	2086	23	137	'10-13	67.02	6.6	3.0	intron	Gmap +	chrX_23_15495001	chrX_15495001	0.43	RAL-142
511	chrX	16560545	16560679	S-element	5	1702	13	134	'6-7	67.16	3.2	3.1	intergenic	CanA-14F -	chrX_13_16560001	chrX_16560001	0.46	RAL-142
512	chrX	16693730	16693869	1360	3386	7	28	139	'11-17	63.52	8.8	2.9	intron	Sep4 -	chrX_28_16690001	chrX_16690001	0.39	RAL-142
513	chrX	16893361	16893453	roo	8670	9020	4	92	'2-2	70.67	1.9	1.4	intergenic	not near genes	chrX_4_16890001	chrX_16890001	0.50	RAL-142
514	chrX	16994081	16994202	roo	8685	400	19	121	'4-15	64.29	4.3	3.6	intron	CG45002 -	chrX_19_16990001	chrX_16990001	0.21	RAL-142
515	chrX	17184878	17184995	roo	14	9051	25	117	'14-11	65.28	4.1	4.9	intron	baz +	chrX_25_17180001	chrX_17180001	0.56	RAL-142
516	chrX	17193286	17193344	F-element	148	188	20	58	'3-17	63.24	15.6	1.2	intron	baz +	chrX_20_17190001	chrX_17190001	0.15	RAL-142
517	chrX	17330071	17330202	opus	487	10	36	131	'23-13	66.07	7.5	4.2	intergenic	not near genes	chrX_36_17330001	chrX_17330001	0.64	RAL-142
518	chrX	17456011	17456139	jockey	4988	4685	18	128	'11-7	64.99	3.3	4.2	intergenic	not near genes	chrX_18_17455001	chrX_17455001	0.61	RAL-142
519	chrX	17837940	17838070	S-element	1704	2	8	130	'4-4	68.62	3.4	1.8	intron	CG6398 +	chrX_8_17835001	chrX_17835001	0.50	RAL-142
520	chrX	18009500	18009541	P-element	2858	19	7	41	'4-3	37.18	5.3	1.1	intron	Sh -	chrX_7_18005001	chrX_18005001	0.57	RAL-142
521	chrX	18021002	18021035	Doc	1	36	10	33	'4-6	47.12	8.2	1.1	intron	Sh -	chrX_10_18020001	chrX_18020001	0.40	RAL-142
522	chrX	18483125	18483256	pogo	2087	6	29	131	'14-15	64.43	11.2	2.4	intron	Hayan -	chrX_29_18480001	chrX_18480001	0.48	RAL-142
523	chrX	18750703	18750767	BS	4860	4796	17	64	'13-4	64.57	10.1	1.5	intergenic	not near genes	chrX_17_18750001	chrX_18750001	0.76	RAL-142
524	chrX	19010129	19010180	Burdock	50	4	8	51	'6-2	65.18	2.2	2.5	intron	CG43759 +	chrX_8_19010001	chrX_19010001	0.75	RAL-142
525	chrX	19187284	19187384	Transpac	4943	5224	13	100	'7-6	63.53	5.2	2.1	intergenic	CG33253 +	chrX_13_19185001	chrX_19185001	0.54	RAL-142
526	chrX	19339577	19339795	Burdock	6184	246	4	218	'2-2	70.68	0.7	2.4	intron	nAChRalpha7 -	chrX_4_19335001	chrX_19335001	0.50	RAL-142
527	chrX	19542871	19543058	mdg1	7078	7067	5	187	'3-2	76.16	4.7	0.9	intron	CG32532 -	chrX_5_19540001	chrX_19540001	0.60	RAL-142
528	chrX	20099891	20099937	S-element	6	1664	11	46	'6-5	66.22	6.1	1.5	intergenic	not near genes	chrX_11_20095001	chrX_20095001	0.55	RAL-142
529	chrX	20330505	20330606	P-element	2885	2875	20	101	'6-14	50.43	8.2	2.2	intergenic	CG1504 -	chrX_20_20330001	chrX_20330001	0.30	RAL-142
530	chrX	20433301	20433427	diver	5890	219	48	126	'23-25	64.25	7.4	5.7	intergenic	mal +	chrX_48_20430001	chrX_20430001	0.48	RAL-142
531	chrX	21087541	21087596	mdg3	65	30	4	55	'1-3	62.90	0.8	2.2	intergenic	not near genes	chrX_4_21085001	chrX_21085001	0.25	RAL-142
532	chrX	21175368	21175396	Gypsy12A_LTR	2181	2235	9	28	'8-1	57.42	2.7	2.4	intergenic	not near genes	chrX_9_21175001	chrX_21175001	0.89	RAL-142
533	chrX	21183288	21183416	S-element	1703	1712	12	128	'8-4	65.30	4.4	2.2	intergenic	not near genes	chrX_12_21180001	chrX_21180001	0.67	RAL-142
534	chrX	21387991	21388026	INE-1	562	533	6	35	'3-3	55.20	0.3	4.6	intergenic	Hlc -	chrX_6_21385001	chrX_21385001	0.50	RAL-142
535	chrX	21399365	21399488	pogo	3	2090	27	123	'17-10	63.09	6.6	3.6	intergenic	not near genes	chrX_27_21395001	chrX_21395001	0.63	RAL-142
536	chrX	21474399	21474432	1731	4340	4357	7	33	'4-3	73.23	6.1	1.0	intergenic	not near genes	chrX_7_21470001	chrX_21470001	0.57	RAL-142
537	chrX	21667904	21667937	gypsy2	60	8	11	33	'7-4	67.10	1.1	5.2	intergenic	not near genes	chrX_11_21665001	chrX_21665001	0.64	RAL-142
538	chrX	22489584	22489721	S-element	1713	1703	13	137	'7-6	65.27	2.9	3.3	intron,3` UTR	l(1)G0196 +,CR43493 -	chrX_13_22485001	chrX_22485001	0.54	RAL-142
539	chrX	22593570	22593669	I-element	13	5328	5	99	'4-1	60.69	2.5	1.4	intron	Cda4 -	chrX_5_22590001	chrX_22590001	0.80	RAL-142
540	chrX	22689391	22689447	mariner2	42	27	4	56	'1-3	60.06	3.8	0.8	intron	CR44997 +	chrX_4_22685001	chrX_22685001	0.25	RAL-142
541	chrX	22717092	22717237	pogo	3	2095	20	145	'8-12	69.24	3.0	5.0	intron	CR44997 +	chrX_20_22715001	chrX_22715001	0.40	RAL-142
542	chrX	22745140	22745180	jockey	4776	4816	11	40	'3-8	60.13	4.1	2.2	intron	CR44997 +	chrX_11_22745001	chrX_22745001	0.27	RAL-142
543	chrX	22769319	22769429	412	6	491	18	110	'15-3	63.83	4.1	3.5	intron	CR44997 +	chrX_18_22765001	chrX_22765001	0.83	RAL-142
544	chrX	22806739	22806771	Burdock	6383	238	7	32	'5-2	57.52	2.2	2.2	3` UTR	CR45464 -	chrX_7_22805001	chrX_22805001	0.71	RAL-142
545	chrX	22861631	22861836	1360	16	3361	14	205	'8-6	66.80	2.5	4.0	intron	CG42346 +	chrX_14_22860001	chrX_22860001	0.57	RAL-142
546	chrY	975824	975927	1360	3365	17	5	103	'3-2	60.14	76.2	0.1	intergenic	not near genes	chrY_5_975001	chrY_975001	0.60	RAL-142
547	chrY	1995257	1995293	gypsy	410	7440	4	36	'3-1	68.80	0.0	4.0	intergenic	not near genes	chrY_4_1995001	chrY_1995001	0.75	RAL-142