SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	488307	488374	Juan	4209	4024	15	67	'6-9	61.99	2.7	4.1	intron	ush +	chr2L_15_485001	chr2L_485001	0.40	RAL-129
2	chr2L	1886056	1886121	412	7546	13	9	65	'6-3	69.00	3.4	2.0	intron	CG7337 +	chr2L_9_1885001	chr2L_1885001	0.67	RAL-129
3	chr2L	1891984	1892049	roo	402	10	11	65	'3-8	66.36	3.4	2.5	intron	CG7337 +	chr2L_11_1890001	chr2L_1890001	0.27	RAL-129
4	chr2L	2345658	2345733	hopper	2	4	8	75	'3-5	64.10	2.0	2.7	intron,intron	CG9967 -,eys +	chr2L_8_2345001	chr2L_2345001	0.38	RAL-129
5	chr2L	2501517	2501580	roo	14	405	11	63	'5-6	64.28	0.3	8.5	intergenic	not near genes	chr2L_11_2500001	chr2L_2500001	0.45	RAL-129
6	chr2L	2722537	2722584	3S18	316	4	5	47	'1-4	60.73	1.5	2.0	intergenic	not near genes	chr2L_5_2720001	chr2L_2720001	0.20	RAL-129
7	chr2L	4867178	4867257	Transpac	1	5227	15	79	'6-9	65.17	3.2	3.6	intron	pog +	chr2L_15_4865001	chr2L_4865001	0.40	RAL-129
8	chr2L	4869056	4869108	hobo	3	2932	8	52	'5-3	62.35	1.6	3.1	intron	pog +	chr2L_8_4865001	chr2L_4865001	0.62	RAL-129
9	chr2L	5108411	5108462	P-element	2886	9	4	51	'1-3	57.44	2.8	1.1	intron	Msp300 +	chr2L_4_5105001	chr2L_5105001	0.25	RAL-129
10	chr2L	5818742	5818801	hobo	2935	10	6	59	'3-3	62.69	3.5	1.3	intergenic	CG31644 -	chr2L_6_5815001	chr2L_5815001	0.50	RAL-129
11	chr2L	5931968	5932042	hobo	7	2708	13	74	'10-3	65.12	3.1	3.2	intron	dsf +	chr2L_13_5930001	chr2L_5930001	0.77	RAL-129
12	chr2L	6212532	6212590	mdg1	415	7050	6	58	'4-2	62.03	2.2	1.9	intergenic	not near genes	chr2L_6_6210001	chr2L_6210001	0.67	RAL-129
13	chr2L	6296706	6296773	TART-A	13148	13150	4	67	'2-2	61.67	2.5	1.1	exon	Ddr +	chr2L_4_6295001	chr2L_6295001	0.50	RAL-129
14	chr2L	6304380	6304455	Burdock	6387	6137	9	75	'5-4	64.88	3.1	2.2	intron	Ddr +	chr2L_9_6300001	chr2L_6300001	0.56	RAL-129
15	chr2L	6318737	6318797	I-element	5348	4	11	60	'3-8	61.77	2.5	3.1	intron	Ddr +	chr2L_11_6315001	chr2L_6315001	0.27	RAL-129
16	chr2L	6398954	6399014	copia	245	6	6	60	'1-5	61.97	1.4	2.5	intron	CG42368 -	chr2L_6_6395001	chr2L_6395001	0.17	RAL-129
17	chr2L	6782281	6782360	Transpac	4918	310	15	79	'3-12	66.67	2.4	4.4	intron	nrv1 -	chr2L_15_6780001	chr2L_6780001	0.20	RAL-129
18	chr2L	6883018	6883076	hobo	1	2920	6	58	'5-1	61.28	1.5	2.4	intron	Nlg2 +	chr2L_6_6880001	chr2L_6880001	0.83	RAL-129
19	chr2L	6999687	6999755	mdg1	7	7453	8	68	'1-7	62.13	2.0	2.7	intron	uif -	chr2L_8_6995001	chr2L_6995001	0.12	RAL-129
20	chr2L	7358605	7358689	roo	8662	410	6	84	'5-1	56.52	1.7	2.2	intergenic	not near genes	chr2L_6_7355001	chr2L_7355001	0.83	RAL-129
21	chr2L	7802436	7802508	1360	2	3380	6	72	'3-3	58.98	2.1	1.9	3` UTR	cdc14 -	chr2L_6_7800001	chr2L_7800001	0.50	RAL-129
22	chr2L	8027961	8028033	roo	8661	402	4	72	'1-3	53.90	1.6	1.5	intron	CG7367 -	chr2L_4_8025001	chr2L_8025001	0.25	RAL-129
23	chr2L	8330786	8330804	297	372	394	6	18	'3-3	66.60	2.2	1.9	intron	CG14275 +	chr2L_6_8330001	chr2L_8330001	0.50	RAL-129
24	chr2L	8362804	8362828	pogo	7	31	7	24	'4-3	68.03	3.5	1.6	intergenic	CG7627 -	chr2L_7_8360001	chr2L_8360001	0.57	RAL-129
25	chr2L	8611704	8611738	F-element	4616	4649	5	34	'2-3	64.74	2.9	1.3	intron	Sema-1a +	chr2L_5_8610001	chr2L_8610001	0.40	RAL-129
26	chr2L	8619022	8619076	297	24	390	8	54	'3-5	73.41	1.8	2.9	intron	Sema-1a +	chr2L_8_8615001	chr2L_8615001	0.38	RAL-129
27	chr2L	8628242	8628315	Tirant	6	403	5	73	'1-4	61.81	2.0	1.7	intron	Sema-1a +	chr2L_5_8625001	chr2L_8625001	0.20	RAL-129
28	chr2L	8629166	8629225	copia	4875	240	5	59	'4-1	64.53	2.2	1.6	intron	Sema-1a +	chr2L_5_8625001	chr2L_8625001	0.80	RAL-129
29	chr2L	9327371	9327443	blood	7383	7014	11	72	'6-5	61.46	2.4	3.2	5` UTR	CR45457 +	chr2L_11_9325001	chr2L_9325001	0.55	RAL-129
30	chr2L	9376834	9376876	F-element	178	51	4	42	'1-3	58.11	3.2	1.0	intron	Shawl -	chr2L_4_9375001	chr2L_9375001	0.25	RAL-129
31	chr2L	9386759	9386787	jockey	4716	4688	4	28	'1-3	66.47	2.4	1.2	intron	Shawl -	chr2L_4_9385001	chr2L_9385001	0.25	RAL-129
32	chr2L	9414337	9414410	copia	5	253	9	73	'4-5	69.98	2.3	2.7	intron	Shawl -	chr2L_9_9410001	chr2L_9410001	0.44	RAL-129
33	chr2L	9437419	9437467	P-element	17	9	8	48	'5-3	47.36	2.3	2.4	intergenic	numb +,RpS28-like +	chr2L_8_9435001	chr2L_9435001	0.62	RAL-129
34	chr2L	9746742	9746801	hobo	2931	9	9	59	'2-7	62.37	3.1	2.2	intergenic	Nckx30C -	chr2L_9_9745001	chr2L_9745001	0.22	RAL-129
35	chr2L	9970484	9970567	297	6580	4	7	83	'5-2	66.77	3.0	1.8	intergenic	not near genes	chr2L_7_9970001	chr2L_9970001	0.71	RAL-129
36	chr2L	10101822	10101898	297	395	6590	7	76	'2-5	66.20	2.7	1.9	intron,intron	CG44153 -,CG34109 +	chr2L_7_10100001	chr2L_10100001	0.29	RAL-129
37	chr2L	10171265	10171321	flea	4754	225	9	56	'8-1	60.48	3.0	2.2	intron	CG44153 -	chr2L_9_10170001	chr2L_10170001	0.89	RAL-129
38	chr2L	10480249	10480326	roo	1	409	12	77	'7-5	66.50	2.5	3.4	intron	RluA-2 +	chr2L_12_10480001	chr2L_10480001	0.58	RAL-129
39	chr2L	11936711	11936779	Stalker2	7248	7639	12	68	'7-5	56.86	2.6	3.3	exon	Or33b +	chr2L_12_11935001	chr2L_11935001	0.58	RAL-129
40	chr2L	12046094	12046150	P-element	14	7	8	56	'2-6	45.90	3.0	2.0	5` UTR	CG6770 -	chr2L_8_12045001	chr2L_12045001	0.25	RAL-129
41	chr2L	12237625	12237683	pogo	2100	25	8	58	'7-1	65.56	2.4	2.4	intron	aret +	chr2L_8_12235001	chr2L_12235001	0.88	RAL-129
42	chr2L	12498557	12498601	I-element	5333	4	4	44	'2-2	64.23	2.0	1.3	intron	bun -	chr2L_4_12495001	chr2L_12495001	0.50	RAL-129
43	chr2L	12555734	12555808	297	390	6581	6	74	'2-4	65.53	4.3	1.1	intergenic	not near genes	chr2L_6_12555001	chr2L_12555001	0.33	RAL-129
44	chr2L	12815628	12815698	hopper	1	1405	5	70	'2-3	65.95	1.6	1.9	intergenic	not near genes	chr2L_5_12815001	chr2L_12815001	0.40	RAL-129
45	chr2L	12922985	12923059	hobo	2936	1	10	74	'3-7	63.77	4.0	2.0	exon	ACXA +	chr2L_10_12920001	chr2L_12920001	0.30	RAL-129
46	chr2L	12955414	12955487	flea	4755	5004	11	73	'6-5	66.81	3.9	2.2	intergenic	not near genes	chr2L_11_12955001	chr2L_12955001	0.55	RAL-129
47	chr2L	13158599	13158682	opus	111	497	12	83	'6-6	68.03	2.1	3.9	intergenic	Pk34A +	chr2L_12_13155001	chr2L_13155001	0.50	RAL-129
48	chr2L	13511671	13511748	Tirant	2	397	16	77	'9-7	66.76	2.2	5.0	intron	B4 -	chr2L_16_13510001	chr2L_13510001	0.56	RAL-129
49	chr2L	13570836	13570892	FB	21	8	4	56	'1-3	51.48	2.3	1.2	intron	kuz +	chr2L_4_13570001	chr2L_13570001	0.25	RAL-129
50	chr2L	13728060	13728081	blood	7093	64	4	21	'2-2	64.05	2.4	1.2	intergenic	not near genes	chr2L_4_13725001	chr2L_13725001	0.50	RAL-129
51	chr2L	14341238	14341302	FB	11	2	10	64	'4-6	61.04	2.9	2.6	intron	CG33090 +	chr2L_10_14340001	chr2L_14340001	0.40	RAL-129
52	chr2L	14983244	14983324	Burdock	6136	255	13	80	'8-5	67.31	3.8	2.7	intron	mol -	chr2L_13_14980001	chr2L_14980001	0.62	RAL-129
53	chr2L	15001919	15001997	opus	112	7499	15	78	'6-9	65.76	3.7	3.2	intergenic	not near genes	chr2L_15_15000001	chr2L_15000001	0.40	RAL-129
54	chr2L	15018719	15018773	pogo	17	2087	4	54	'1-3	65.52	1.8	1.4	intron	GABA-B-R1 +	chr2L_4_15015001	chr2L_15015001	0.25	RAL-129
55	chr2L	15142249	15142306	BS	4704	5082	8	57	'4-4	66.08	1.9	2.8	intergenic	not near genes	chr2L_8_15140001	chr2L_15140001	0.50	RAL-129
56	chr2L	15368281	15368355	Tirant	9	399	11	74	'2-9	70.93	2.6	3.1	intergenic	not near genes	chr2L_11_15365001	chr2L_15365001	0.18	RAL-129
57	chr2L	15575447	15575510	412	491	4	5	63	'4-1	59.47	1.4	2.1	intron	kek3 +	chr2L_5_15575001	chr2L_15575001	0.80	RAL-129
58	chr2L	15888544	15888593	Juan	6	4194	5	49	'4-1	62.67	3.8	1.0	intergenic	Tep1 -	chr2L_5_15885001	chr2L_15885001	0.80	RAL-129
59	chr2L	15920046	15920125	jockey	4986	4974	8	79	'5-3	55.12	1.3	3.5	intron	beat-Ib -	chr2L_8_15920001	chr2L_15920001	0.62	RAL-129
60	chr2L	15995357	15995403	copia	252	4900	5	46	'4-1	64.46	4.1	1.0	intergenic	not near genes	chr2L_5_15995001	chr2L_15995001	0.80	RAL-129
61	chr2L	16110666	16110732	roo	8670	400	10	66	'4-6	63.62	2.0	3.3	intergenic	not near genes	chr2L_10_16110001	chr2L_16110001	0.40	RAL-129
62	chr2L	16585853	16585933	copia	257	1	9	80	'5-4	68.06	2.5	2.6	intron	CG42389 +	chr2L_9_16585001	chr2L_16585001	0.56	RAL-129
63	chr2L	16670633	16670704	Stalker2	9	404	11	71	'6-5	61.48	2.2	3.4	intron	Trpgamma -	chr2L_11_16670001	chr2L_16670001	0.55	RAL-129
64	chr2L	16818327	16818389	Stalker2	401	7265	8	62	'5-3	65.28	2.1	2.6	intron,intron	CG13280 -,mdy +	chr2L_8_16815001	chr2L_16815001	0.62	RAL-129
65	chr2L	16886660	16886726	Burdock	237	6134	9	66	'2-7	67.07	4.0	1.8	intergenic	CG31743 +,CG34313 +,CG6115 -	chr2L_9_16885001	chr2L_16885001	0.22	RAL-129
66	chr2L	17730435	17730513	pogo	2099	3	11	78	'8-3	63.47	2.4	3.2	intron	CadN -	chr2L_11_17730001	chr2L_17730001	0.73	RAL-129
67	chr2L	17841049	17841076	Juan	4043	4068	6	27	'3-3	61.33	2.4	1.8	intron	CadN2 -	chr2L_6_17840001	chr2L_17840001	0.50	RAL-129
68	chr2L	18299858	18299929	hobo	2709	6	4	71	'3-1	66.60	2.1	1.3	intergenic	not near genes	chr2L_4_18295001	chr2L_18295001	0.75	RAL-129
69	chr2L	19216962	19217015	mdg1	7441	10	5	53	'3-2	60.42	3.0	1.2	intergenic	CR44189 +	chr2L_5_19215001	chr2L_19215001	0.60	RAL-129
70	chr2L	19311083	19311150	roo	8667	398	15	67	'12-3	63.67	3.7	3.2	intergenic	not near genes	chr2L_15_19310001	chr2L_19310001	0.80	RAL-129
71	chr2L	19411872	19411888	297	6581	12	4	16	'3-1	65.35	7.7	0.5	intron	Pax -	chr2L_4_19410001	chr2L_19410001	0.75	RAL-129
72	chr2L	19642332	19642381	mdg3	5476	5254	9	49	'4-5	67.86	1.2	4.1	intron,3` UTR	Lar +,CR44979 -	chr2L_9_19640001	chr2L_19640001	0.44	RAL-129
73	chr2L	20213603	20213626	transib2	2819	2794	7	23	'3-4	62.73	4.6	1.2	intergenic	not near genes	chr2L_7_20210001	chr2L_20210001	0.43	RAL-129
74	chr2L	20231028	20231091	hopper	1406	3	6	63	'4-2	69.11	2.1	1.9	intergenic	not near genes	chr2L_6_20230001	chr2L_20230001	0.67	RAL-129
75	chr2L	20264598	20264668	copia	4	253	6	70	'2-4	55.07	2.4	1.8	intergenic	CG17570 -	chr2L_6_20260001	chr2L_20260001	0.33	RAL-129
76	chr2L	20611419	20611499	opus	494	110	9	80	'7-2	71.31	3.2	2.1	intron	CR44909 -	chr2L_9_20610001	chr2L_20610001	0.78	RAL-129
77	chr2L	20993985	20994047	Tirant	400	19	7	62	'4-3	63.41	3.2	1.7	intron	CG42238 -	chr2L_7_20990001	chr2L_20990001	0.57	RAL-129
78	chr2L	21009067	21009140	roo	8670	408	12	73	'6-6	67.23	2.7	3.2	intron	CG42238 -	chr2L_12_21005001	chr2L_21005001	0.50	RAL-129
79	chr2L	21276709	21276757	1360	11	8	10	48	'4-6	71.32	4.4	1.9	intron	CG8671 +	chr2L_10_21275001	chr2L_21275001	0.40	RAL-129
80	chr2L	21751966	21752040	roo	8668	411	15	74	'5-10	66.36	2.8	3.9	intron	step -	chr2L_15_21750001	chr2L_21750001	0.33	RAL-129
81	chr2L	22086168	22086250	copia	255	4867	8	82	'4-4	61.10	1.7	3.0	intergenic	not near genes	chr2L_8_22085001	chr2L_22085001	0.50	RAL-129
82	chr2L	22124447	22124469	297	25	6	6	22	'2-4	66.01	3.0	1.5	intron,3` UTR	CG3651 +,CycK -	chr2L_6_22120001	chr2L_22120001	0.33	RAL-129
83	chr2L	22276812	22276889	Tirant	8111	400	11	77	'7-4	65.63	2.5	3.1	intergenic	not near genes	chr2L_11_22275001	chr2L_22275001	0.64	RAL-129
84	chr2L	23180669	23180747	Doc	4511	6	4	78	'1-3	63.05	1.2	1.8	intergenic	not near genes	chr2L_4_23180001	chr2L_23180001	0.25	RAL-129
85	chr2L	23299979	23299997	invader4	3079	336	4	18	'3-1	57.47	2.2	1.2	intergenic	not near genes	chr2L_4_23295001	chr2L_23295001	0.75	RAL-129
86	chr2R	329753	329768	X-element	4311	4309	5	15	'2-3	48.34	5.1	0.8	intergenic	not near genes	chr2R_5_325001	chr2R_325001	0.40	RAL-129
87	chr2R	640037	640113	flea	4758	251	9	76	'8-1	67.76	7.6	1.0	intron	CG40378 +	chr2R_9_640001	chr2R_640001	0.89	RAL-129
88	chr2R	982057	982112	gypsy	7424	2	6	55	'2-4	68.41	1.9	2.1	intergenic	not near genes	chr2R_6_980001	chr2R_980001	0.33	RAL-129
89	chr2R	991857	991874	Max-element	281	8528	6	17	'3-3	72.24	3.0	1.5	intergenic	not near genes	chr2R_6_990001	chr2R_990001	0.50	RAL-129
90	chr2R	2050346	2050395	jockey	62	4989	5	49	'3-2	60.18	1.0	2.5	intron	CG17684 -	chr2R_5_2050001	chr2R_2050001	0.60	RAL-129
91	chr2R	2095435	2095462	Tabor	7323	456	4	27	'3-1	63.56	3.6	0.9	intron	CG17684 -	chr2R_4_2095001	chr2R_2095001	0.75	RAL-129
92	chr2R	3594499	3594558	copia	4882	249	8	59	'4-4	67.59	1.8	2.9	intergenic	not near genes	chr2R_8_3590001	chr2R_3590001	0.50	RAL-129
93	chr2R	4606224	4606285	1360	3386	1	9	61	'5-4	71.16	4.1	1.8	intron	p120ctn +	chr2R_9_4605001	chr2R_4605001	0.56	RAL-129
94	chr2R	4996339	4996355	rover	6979	6963	5	16	'4-1	68.20	3.1	1.2	intron	Ir41a +	chr2R_5_4995001	chr2R_4995001	0.80	RAL-129
95	chr2R	5262579	5262647	1360	1	3381	14	68	'10-4	66.42	3.1	3.4	intron	d4 +	chr2R_14_5260001	chr2R_5260001	0.71	RAL-129
96	chr2R	5517199	5517253	copia	9	239	7	54	'3-4	63.41	0.8	3.9	intron	CG30438 +	chr2R_7_5515001	chr2R_5515001	0.43	RAL-129
97	chr2R	6494364	6494410	P-element	26	6	5	46	'4-1	43.57	3.3	1.2	intergenic	not near genes	chr2R_5_6490001	chr2R_6490001	0.80	RAL-129
98	chr2R	6779768	6779840	17.6	7416	7	10	72	'7-3	67.56	2.1	3.2	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_10_6775001	chr2R_6775001	0.70	RAL-129
99	chr2R	6788097	6788154	pogo	2091	17	6	57	'1-5	65.78	3.0	1.5	intron	Epac -	chr2R_6_6785001	chr2R_6785001	0.17	RAL-129
100	chr2R	6885479	6885546	1360	3380	3	13	67	'9-4	68.97	3.2	3.1	intergenic	Spn42De +	chr2R_13_6885001	chr2R_6885001	0.69	RAL-129
101	chr2R	7955469	7955514	P-element	2878	2878	8	45	'4-4	44.07	5.7	1.2	5` UTR	CG14764 -	chr2R_8_7955001	chr2R_7955001	0.50	RAL-129
102	chr2R	8143701	8143759	FB	8	8	9	58	'7-2	60.48	3.1	2.2	intron	Lpin -	chr2R_9_8140001	chr2R_8140001	0.78	RAL-129
103	chr2R	8337085	8337152	hobo	2935	6	13	67	'6-7	66.30	4.2	2.5	intron	pdm3 +	chr2R_13_8335001	chr2R_8335001	0.46	RAL-129
104	chr2R	8378597	8378655	pogo	2094	5	4	58	'1-3	63.58	1.3	1.7	intron	pdm3 +	chr2R_4_8375001	chr2R_8375001	0.25	RAL-129
105	chr2R	8589344	8589424	Transpac	4920	310	7	80	'4-3	68.42	3.9	1.4	intergenic	not near genes	chr2R_7_8585001	chr2R_8585001	0.57	RAL-129
106	chr2R	8601296	8601360	S-element	3	1700	6	64	'3-3	69.00	1.2	2.7	intron	rgr +	chr2R_6_8600001	chr2R_8600001	0.50	RAL-129
107	chr2R	9095831	9095876	pogo	23	2090	5	45	'3-2	67.07	2.2	1.6	intron,5` UTR	Uhg4 +,snoRNA:Or-aca5 +	chr2R_5_9095001	chr2R_9095001	0.60	RAL-129
108	chr2R	9300917	9300997	pogo	2	2096	11	80	'9-2	64.64	3.9	2.2	3` UTR	Drep-2 +	chr2R_11_9300001	chr2R_9300001	0.82	RAL-129
109	chr2R	9691997	9692063	P-element	2883	8	7	66	'3-4	55.29	4.7	1.2	intron	Uba1 -	chr2R_7_9690001	chr2R_9690001	0.43	RAL-129
110	chr2R	9870956	9871022	roo	8668	399	8	66	'5-3	66.59	1.7	3.0	intron	cbx -	chr2R_8_9870001	chr2R_9870001	0.62	RAL-129
111	chr2R	10176513	10176557	412	27	7536	9	44	'3-6	65.62	3.6	2.0	intron	KCNQ -	chr2R_9_10175001	chr2R_10175001	0.33	RAL-129
112	chr2R	10441722	10441773	roo	403	24	8	51	'5-3	66.95	1.2	3.6	intron	Galphao +	chr2R_8_10440001	chr2R_10440001	0.62	RAL-129
113	chr2R	10763634	10763710	blood	7387	7013	10	76	'8-2	68.71	2.0	3.3	intron	CG33144 -	chr2R_10_10760001	chr2R_10760001	0.80	RAL-129
114	chr2R	11508555	11508571	opus	7495	7480	4	16	'2-2	60.74	2.7	1.1	3` UTR	inv +	chr2R_4_11505001	chr2R_11505001	0.50	RAL-129
115	chr2R	11626335	11626430	gypsy7	5015	5015	5	95	'2-3	75.54	2.0	1.7	intron	CG9005 -	chr2R_5_11625001	chr2R_11625001	0.40	RAL-129
116	chr2R	11951806	11951878	pogo	7	2098	14	72	'4-10	65.35	2.5	4.0	intron	CG13188 +	chr2R_14_11950001	chr2R_11950001	0.29	RAL-129
117	chr2R	12009782	12010031	roo	9045	9	4	249	'1-3	69.06	3.6	0.9	intron	otk -	chr2R_4_12005001	chr2R_12005001	0.25	RAL-129
118	chr2R	12185337	12185404	accord	7374	4	5	67	'2-3	66.64	4.5	0.9	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_5_12185001	chr2R_12185001	0.40	RAL-129
119	chr2R	12336623	12336651	pogo	33	4	4	28	'2-2	66.95	2.6	1.1	intergenic	CG34021 +,CG8490 +	chr2R_4_12335001	chr2R_12335001	0.50	RAL-129
120	chr2R	12356512	12356569	I-element	5348	3	12	57	'2-10	64.56	1.9	4.1	exon	CG30049 +	chr2R_12_12355001	chr2R_12355001	0.17	RAL-129
121	chr2R	12419507	12419525	jockey	4969	4988	4	18	'3-1	59.53	1.5	1.6	intergenic	CG42782 -,CG8834 -	chr2R_4_12415001	chr2R_12415001	0.75	RAL-129
122	chr2R	12696853	12696902	roo	9052	11	4	49	'2-2	67.75	4.6	0.7	intergenic	not near genes	chr2R_4_12695001	chr2R_12695001	0.50	RAL-129
123	chr2R	12809512	12809578	flea	4761	245	8	66	'4-4	70.85	2.0	2.7	intergenic	not near genes	chr2R_8_12805001	chr2R_12805001	0.50	RAL-129
124	chr2R	12845266	12845285	copia	4868	18	4	19	'1-3	58.67	6.1	0.6	intergenic	CG17575 -	chr2R_4_12845001	chr2R_12845001	0.25	RAL-129
125	chr2R	13035148	13035201	P-element	4	2866	6	53	'3-3	42.55	4.1	1.2	intergenic	not near genes	chr2R_6_13035001	chr2R_13035001	0.50	RAL-129
126	chr2R	13460715	13460802	297	6580	389	7	87	'4-3	67.41	2.2	2.2	intron	arr -	chr2R_7_13460001	chr2R_13460001	0.57	RAL-129
127	chr2R	13607764	13607828	opus	18	498	6	64	'3-3	68.45	2.9	1.5	intergenic	not near genes	chr2R_6_13605001	chr2R_13605001	0.50	RAL-129
128	chr2R	13638594	13638652	copia	243	4877	5	58	'2-3	64.56	1.3	2.2	intron	fas +	chr2R_5_13635001	chr2R_13635001	0.40	RAL-129
129	chr2R	13677893	13677936	BS	5084	7	5	43	'2-3	55.62	2.3	1.5	intron	fas +	chr2R_5_13675001	chr2R_13675001	0.40	RAL-129
130	chr2R	13704080	13704102	I-element	5349	5327	6	22	'3-3	63.11	7.0	0.8	intron	fas +	chr2R_6_13700001	chr2R_13700001	0.50	RAL-129
131	chr2R	14729909	14729957	hobo	5	2918	5	48	'3-2	64.09	3.2	1.2	intergenic	not near genes	chr2R_5_14725001	chr2R_14725001	0.60	RAL-129
132	chr2R	14921491	14921555	pogo	6	2087	11	64	'8-3	64.64	2.2	3.4	intron	CG10249 -	chr2R_11_14920001	chr2R_14920001	0.73	RAL-129
133	chr2R	15077064	15077117	copia	21	249	8	53	'1-7	64.55	3.4	1.8	intergenic	not near genes	chr2R_8_15075001	chr2R_15075001	0.12	RAL-129
134	chr2R	15300927	15300949	hobo	12	3	4	22	'2-2	62.48	3.0	1.0	intron	Trpm -	chr2R_4_15300001	chr2R_15300001	0.50	RAL-129
135	chr2R	15303557	15303594	FB	23	17	7	37	'5-2	67.16	2.0	2.3	intron	Trpm -	chr2R_7_15300001	chr2R_15300001	0.71	RAL-129
136	chr2R	15730723	15730756	BS	5068	4	9	33	'4-5	61.64	3.2	2.1	intron	CG30089 +	chr2R_9_15730001	chr2R_15730001	0.44	RAL-129
137	chr2R	15866973	15867028	412	13	7534	9	55	'4-5	61.04	4.8	1.6	exon	Rif1 -	chr2R_9_15865001	chr2R_15865001	0.44	RAL-129
138	chr2R	15930582	15930612	Juan	4028	4184	5	30	'4-1	57.60	2.5	1.4	intron	bdg -	chr2R_5_15930001	chr2R_15930001	0.80	RAL-129
139	chr2R	16218985	16219007	roo	9043	402	4	22	'2-2	62.20	5.0	0.7	intron	mrj -	chr2R_4_16215001	chr2R_16215001	0.50	RAL-129
140	chr2R	16376503	16376524	hobo	28	7	4	21	'2-2	59.83	2.4	1.2	intergenic	not near genes	chr2R_4_16375001	chr2R_16375001	0.50	RAL-129
141	chr2R	16451801	16451878	Burdock	249	6135	5	77	'2-3	62.40	2.7	1.4	intergenic	not near genes	chr2R_5_16450001	chr2R_16450001	0.40	RAL-129
142	chr2R	16521630	16521650	hopper	1390	11	7	20	'4-3	61.99	4.9	1.2	intron	Sema-2a +	chr2R_7_16520001	chr2R_16520001	0.57	RAL-129
143	chr2R	17231259	17231313	springer	13	369	10	54	'6-4	61.43	2.3	3.0	intron	mbl +	chr2R_10_17230001	chr2R_17230001	0.60	RAL-129
144	chr2R	17686913	17686979	1360	6	3383	10	66	'7-3	63.40	3.7	2.1	intron	HPS4 +	chr2R_10_17685001	chr2R_17685001	0.70	RAL-129
145	chr2R	17691664	17691722	1360	14	6	14	58	'6-8	65.38	2.4	4.1	intron	swi2 -	chr2R_14_17690001	chr2R_17690001	0.43	RAL-129
146	chr2R	17705608	17705681	roo	6	411	10	73	'3-7	66.40	2.5	2.9	intron	CG6424 -	chr2R_10_17705001	chr2R_17705001	0.30	RAL-129
147	chr2R	18028091	18028134	jockey	4977	8	7	43	'3-4	63.95	2.3	2.1	intergenic	not near genes	chr2R_7_18025001	chr2R_18025001	0.43	RAL-129
148	chr2R	18712246	18712296	hobo	7	2933	6	50	'2-4	62.89	4.1	1.2	intergenic	pncr016:2R +	chr2R_6_18710001	chr2R_18710001	0.33	RAL-129
149	chr2R	18802440	18802524	Tirant	403	8107	16	84	'8-8	69.70	1.7	5.9	5` UTR	l(2)08717 -	chr2R_16_18800001	chr2R_18800001	0.50	RAL-129
150	chr2R	19074143	19074160	I-element	32	15	4	17	'1-3	62.19	3.0	1.0	intron	5-HT1A +	chr2R_4_19070001	chr2R_19070001	0.25	RAL-129
151	chr2R	19330279	19330344	McClintock	5956	466	10	65	'7-3	66.60	2.9	2.6	intron	Rgk1 -	chr2R_10_19330001	chr2R_19330001	0.70	RAL-129
152	chr2R	19887755	19887806	roo	409	29	8	51	'4-4	68.12	2.8	2.1	intergenic	not near genes	chr2R_8_19885001	chr2R_19885001	0.50	RAL-129
153	chr2R	20445608	20445685	blood	6	379	16	77	'7-9	64.57	3.1	3.9	intron	CG12484 +	chr2R_16_20445001	chr2R_20445001	0.44	RAL-129
154	chr2R	20708716	20708775	roo	395	6	8	59	'4-4	60.79	3.1	2.0	intron	dpr +	chr2R_8_20705001	chr2R_20705001	0.50	RAL-129
155	chr2R	21056807	21056852	P-element	27	2881	6	45	'2-4	53.22	5.3	1.0	5` UTR	shg -	chr2R_6_21055001	chr2R_21055001	0.33	RAL-129
156	chr2R	21379442	21379493	P-element	1	2862	14	51	'11-3	50.89	3.6	3.0	5` UTR	cv-2 -	chr2R_14_21375001	chr2R_21375001	0.79	RAL-129
157	chr2R	21574698	21574763	I-element	2	5350	6	65	'4-2	56.92	0.9	3.2	intron	CG10440 -	chr2R_6_21570001	chr2R_21570001	0.67	RAL-129
158	chr2R	21726688	21726801	mdg1	7039	7447	5	113	'3-2	57.48	1.2	2.3	intergenic	not near genes	chr2R_5_21725001	chr2R_21725001	0.60	RAL-129
159	chr2R	22016585	22016661	297	2	6973	7	76	'1-6	68.81	1.8	2.5	intron	CG34370 -	chr2R_7_22015001	chr2R_22015001	0.14	RAL-129
160	chr2R	22397765	22397837	1360	5	1	12	72	'7-5	64.65	2.4	3.5	intron	babos -	chr2R_12_22395001	chr2R_22395001	0.58	RAL-129
161	chr2R	22575786	22575857	pogo	2098	10	5	71	'3-2	70.39	2.6	1.4	intron	dnr1 -	chr2R_5_22575001	chr2R_22575001	0.60	RAL-129
162	chr2R	22616874	22616925	BS	5002	5076	12	51	'7-5	63.27	3.0	3.0	intron	CG33143 +	chr2R_12_22615001	chr2R_22615001	0.58	RAL-129
163	chr2R	23014400	23014480	roo	1	409	17	80	'3-14	68.33	1.0	8.5	intron,intron	twi +,CG42741 -	chr2R_17_23010001	chr2R_23010001	0.18	RAL-129
164	chr2R	23354298	23354342	Tabor	20	7308	6	44	'1-5	58.58	2.5	1.7	intergenic	CG30409 +	chr2R_6_23350001	chr2R_23350001	0.17	RAL-129
165	chr2R	23671822	23671847	jockey	4678	4706	4	25	'2-2	64.61	9.1	0.4	intron	Pde8 +	chr2R_4_23670001	chr2R_23670001	0.50	RAL-129
166	chr2R	23748421	23748462	blood	7042	7380	5	41	'1-4	60.57	1.2	2.3	3` UTR	CG13560 +	chr2R_5_23745001	chr2R_23745001	0.20	RAL-129
167	chr2R	24492130	24492202	roo	410	8662	11	72	'6-5	65.11	1.9	3.8	intergenic	CG13589 -	chr2R_11_24490001	chr2R_24490001	0.55	RAL-129
168	chr2R	24825871	24825914	I-element	5347	17	7	43	'4-3	67.90	3.2	1.7	intron	Dll +	chr2R_7_24825001	chr2R_24825001	0.57	RAL-129
169	chr2R	25102417	25102496	diver	226	5886	11	79	'7-4	62.37	1.6	4.2	intron	lov -	chr2R_11_25100001	chr2R_25100001	0.64	RAL-129
170	chr3L	41464	41482	TAHRE	10410	10427	4	18	'3-1	62.05	1.1	1.9	intergenic	not near genes	chr3L_4_40001	chr3L_40001	0.75	RAL-129
171	chr3L	137726	137802	hopper	1	4	13	76	'5-8	63.07	4.2	2.5	intron	Pdk1 +	chr3L_13_135001	chr3L_135001	0.38	RAL-129
172	chr3L	206487	206554	1360	9	3386	23	67	'13-10	64.83	4.2	4.4	exon	CG13876 +	chr3L_23_205001	chr3L_205001	0.57	RAL-129
173	chr3L	206501	206564	Tc3	238	319	4	63	'1-3	73.84	4.4	0.7	exon	CG13876 +	chr3L_4_205001	chr3L_205001	0.25	RAL-129
174	chr3L	223386	223418	FB	14	28	6	32	'4-2	64.43	1.6	2.3	intergenic	pyx -,CG33229 +	chr3L_6_220001	chr3L_220001	0.67	RAL-129
175	chr3L	751727	751778	hopper	1405	1396	6	51	'2-4	69.98	2.6	1.7	intron,intron	hng3 -,emc +	chr3L_6_750001	chr3L_750001	0.33	RAL-129
176	chr3L	1233209	1233226	Tabor	9	24	7	17	'4-3	60.14	9.4	0.7	exon	CG33965 +	chr3L_7_1230001	chr3L_1230001	0.57	RAL-129
177	chr3L	1294458	1294513	1360	3381	3375	9	55	'8-1	60.36	3.1	2.2	3` UTR	CG32333 +	chr3L_9_1290001	chr3L_1290001	0.89	RAL-129
178	chr3L	2016648	2016698	Transpac	294	16	5	50	'2-3	69.09	2.3	1.5	intergenic	not near genes	chr3L_5_2015001	chr3L_2015001	0.40	RAL-129
179	chr3L	2196413	2196492	roo	408	1	5	79	'2-3	67.93	3.1	1.2	intergenic	not near genes	chr3L_5_2195001	chr3L_2195001	0.40	RAL-129
180	chr3L	3197572	3197641	P-element	2884	6	6	69	'3-3	53.55	2.1	1.9	5` UTR	CG14966 -	chr3L_6_3195001	chr3L_3195001	0.50	RAL-129
181	chr3L	3540140	3540210	mdg3	235	5252	14	70	'5-9	61.29	1.9	4.8	intron	Eip63E +	chr3L_14_3540001	chr3L_3540001	0.36	RAL-129
182	chr3L	3738022	3738234	hopper	1382	1414	13	212	'1-12	66.42	1.8	4.6	intron	CG32264 -	chr3L_13_3735001	chr3L_3735001	0.08	RAL-129
183	chr3L	3930133	3930210	roo	3	410	12	77	'7-5	62.60	3.1	2.9	intron	Eip63F-1 -	chr3L_12_3930001	chr3L_3930001	0.58	RAL-129
184	chr3L	3944613	3944690	hobo	5	2707	8	77	'4-4	61.60	2.7	2.2	exon	CG14982 +	chr3L_8_3940001	chr3L_3940001	0.50	RAL-129
185	chr3L	4002280	4002348	hobo	2935	11	8	68	'5-3	62.24	2.6	2.2	intergenic	not near genes	chr3L_8_4000001	chr3L_4000001	0.62	RAL-129
186	chr3L	5013362	5013441	roo	406	8663	12	79	'6-6	67.57	3.4	2.7	intron	Con -	chr3L_12_5010001	chr3L_5010001	0.50	RAL-129
187	chr3L	5067819	5067901	412	7535	3	8	82	'4-4	68.07	1.6	3.1	intron	Con -	chr3L_8_5065001	chr3L_5065001	0.50	RAL-129
188	chr3L	5087223	5087281	hobo	2931	6	11	58	'3-8	64.51	2.2	3.4	intergenic	not near genes	chr3L_11_5085001	chr3L_5085001	0.27	RAL-129
189	chr3L	5470477	5470540	Tabor	2	474	13	63	'11-2	61.67	3.5	2.9	intergenic	not near genes	chr3L_13_5470001	chr3L_5470001	0.85	RAL-129
190	chr3L	5966991	5967015	jockey	36	15	5	24	'3-2	64.58	3.8	1.0	intergenic	not near genes	chr3L_5_5965001	chr3L_5965001	0.60	RAL-129
191	chr3L	6528314	6528380	Bari1	1692	3	5	66	'2-3	67.04	2.4	1.5	intron	sfl +	chr3L_5_6525001	chr3L_6525001	0.40	RAL-129
192	chr3L	6828359	6828385	I-element	8	34	5	26	'3-2	63.78	3.7	1.1	intergenic	not near genes	chr3L_5_6825001	chr3L_6825001	0.60	RAL-129
193	chr3L	6947878	6947905	1360	3384	31	9	27	'3-6	69.14	5.1	1.5	exon	tow +	chr3L_9_6945001	chr3L_6945001	0.33	RAL-129
194	chr3L	6948874	6948939	1360	5	8	11	65	'7-4	64.63	3.9	2.2	3` UTR	tow +	chr3L_11_6945001	chr3L_6945001	0.64	RAL-129
195	chr3L	6975657	6975727	1360	3385	5	7	70	'4-3	67.08	2.3	2.1	intron	Galphai -	chr3L_7_6975001	chr3L_6975001	0.57	RAL-129
196	chr3L	7915147	7915195	Tabor	7319	26	10	48	'9-1	61.39	4.6	1.8	intergenic	CG8111 -,CG32368 +	chr3L_10_7915001	chr3L_7915001	0.90	RAL-129
197	chr3L	8713084	8713163	Burdock	2	254	9	79	'6-3	65.26	4.0	1.8	intergenic	not near genes	chr3L_9_8710001	chr3L_8710001	0.67	RAL-129
198	chr3L	9426700	9426759	P-element	2869	1	9	59	'4-5	49.53	4.9	1.5	intergenic	CG3967 -,Shc +	chr3L_9_9425001	chr3L_9425001	0.44	RAL-129
199	chr3L	10004957	10005018	blood	7373	3	11	61	'4-7	64.78	1.4	4.6	intron	dpr6 +	chr3L_11_10000001	chr3L_10000001	0.36	RAL-129
200	chr3L	10429792	10429848	Tirant	8499	4	9	56	'5-4	63.62	2.3	2.7	3` UTR	Ir67b -	chr3L_9_10425001	chr3L_10425001	0.56	RAL-129
201	chr3L	11128053	11128125	pogo	2098	5	6	72	'2-4	66.57	1.4	2.5	intron	CG42575 +	chr3L_6_11125001	chr3L_11125001	0.33	RAL-129
202	chr3L	11902315	11902395	mdg3	250	5257	10	80	'5-5	65.63	1.0	5.0	intron	CG44837 -	chr3L_10_11900001	chr3L_11900001	0.50	RAL-129
203	chr3L	12385361	12385433	roo	407	8664	5	72	'2-3	57.64	1.3	2.2	intron	Ncc69 -	chr3L_5_12385001	chr3L_12385001	0.40	RAL-129
204	chr3L	12628560	12628630	roo	8664	398	8	70	'7-1	64.68	1.8	2.9	intron	CR32111 +	chr3L_8_12625001	chr3L_12625001	0.88	RAL-129
205	chr3L	12863715	12863766	Transpac	27	307	7	51	'1-6	72.34	2.8	1.8	intergenic	not near genes	chr3L_7_12860001	chr3L_12860001	0.14	RAL-129
206	chr3L	13728631	13728682	412	3	476	7	51	'4-3	63.87	2.8	1.8	intron	bru-3 -	chr3L_7_13725001	chr3L_13725001	0.57	RAL-129
207	chr3L	13864123	13864194	roo	4	405	12	71	'4-8	64.27	2.4	3.5	intron	CG8745 -	chr3L_12_13860001	chr3L_13860001	0.33	RAL-129
208	chr3L	13885451	13885513	hopper	1406	10	7	62	'2-5	72.54	1.8	2.5	intron	dysc -	chr3L_7_13885001	chr3L_13885001	0.29	RAL-129
209	chr3L	14049883	14050041	pogo	149	2082	7	158	'1-6	67.86	2.5	2.0	5` UTR	blue -	chr3L_7_14045001	chr3L_14045001	0.14	RAL-129
210	chr3L	14551270	14551299	P-element	2885	30	4	29	'1-3	42.54	3.2	1.0	intergenic	CG9238 -	chr3L_4_14550001	chr3L_14550001	0.25	RAL-129
211	chr3L	14561546	14561613	pogo	2100	3	4	67	'1-3	66.88	0.5	2.7	intron	CG34039 +	chr3L_4_14560001	chr3L_14560001	0.25	RAL-129
212	chr3L	15035134	15035192	pogo	2092	17	11	58	'8-3	68.82	2.2	3.4	intron	Sytbeta -	chr3L_11_15035001	chr3L_15035001	0.73	RAL-129
213	chr3L	15177975	15178050	pogo	2097	4	9	75	'4-5	65.46	2.8	2.4	intergenic	not near genes	chr3L_9_15175001	chr3L_15175001	0.44	RAL-129
214	chr3L	15480359	15480431	pogo	8	2099	9	72	'4-5	68.64	0.3	6.9	intergenic	not near genes	chr3L_9_15480001	chr3L_15480001	0.44	RAL-129
215	chr3L	15494660	15494716	S-element	4	1694	5	56	'3-2	66.11	1.9	1.7	intron	CG12355 -	chr3L_5_15490001	chr3L_15490001	0.60	RAL-129
216	chr3L	15893367	15893396	Doc	7	35	5	29	'3-2	61.67	2.6	1.4	intron	pHCl -	chr3L_5_15890001	chr3L_15890001	0.60	RAL-129
217	chr3L	16121794	16121875	blood	7010	7389	8	81	'3-5	66.95	2.7	2.2	intergenic	Taf4 +,CG12272 +	chr3L_8_16120001	chr3L_16120001	0.38	RAL-129
218	chr3L	16146715	16146784	Transpac	310	4930	11	69	'8-3	64.12	2.0	3.7	intron	CG5151 -	chr3L_11_16145001	chr3L_16145001	0.73	RAL-129
219	chr3L	16531475	16531550	copia	254	3	15	75	'10-5	65.52	2.4	4.4	intron	CG43373 -	chr3L_15_16530001	chr3L_16530001	0.67	RAL-129
220	chr3L	16772521	16772576	FB	15	7	9	55	'4-5	68.26	3.5	2.0	intron	Nrt +	chr3L_9_16770001	chr3L_16770001	0.44	RAL-129
221	chr3L	16787677	16787729	roo	8681	9060	10	52	'3-7	58.50	1.4	4.2	3` UTR	CG9674 -	chr3L_10_16785001	chr3L_16785001	0.30	RAL-129
222	chr3L	16807712	16807786	P-element	2886	2	7	74	'3-4	56.35	3.1	1.7	5` UTR,intron	CG9674 -,nudC +	chr3L_7_16805001	chr3L_16805001	0.43	RAL-129
223	chr3L	17252040	17252102	I-element	2	5349	10	62	'7-3	63.23	3.7	2.1	intron	CR43870 +	chr3L_10_17250001	chr3L_17250001	0.70	RAL-129
224	chr3L	17321843	17321895	roo	6	389	9	52	'6-3	68.78	2.4	2.6	intergenic	not near genes	chr3L_9_17320001	chr3L_17320001	0.67	RAL-129
225	chr3L	17898748	17898768	jockey	4676	4695	4	20	'1-3	60.44	3.1	1.0	intergenic	Prestin -	chr3L_4_17895001	chr3L_17895001	0.25	RAL-129
226	chr3L	17936972	17936997	jockey	35	10	5	25	'1-4	62.76	3.8	1.0	intron	CG43174 +	chr3L_5_17935001	chr3L_17935001	0.20	RAL-129
227	chr3L	18341189	18341249	roo	8664	389	4	60	'3-1	69.24	1.4	1.7	intergenic	not near genes	chr3L_4_18340001	chr3L_18340001	0.75	RAL-129
228	chr3L	18356121	18356188	copia	241	4868	9	67	'5-4	63.96	2.3	2.7	intergenic	not near genes	chr3L_9_18355001	chr3L_18355001	0.56	RAL-129
229	chr3L	18597622	18597650	Doc	29	1	5	28	'1-4	65.53	4.4	0.9	intergenic	CR45390 +	chr3L_5_18595001	chr3L_18595001	0.20	RAL-129
230	chr3L	18723669	18723738	P-element	1	5	8	69	'5-3	56.27	1.1	3.8	intergenic	CR43985 +,CG12477 -	chr3L_8_18720001	chr3L_18720001	0.62	RAL-129
231	chr3L	18730430	18730506	Stalker2	403	1	12	76	'5-7	64.78	2.9	3.1	intergenic	not near genes	chr3L_12_18730001	chr3L_18730001	0.42	RAL-129
232	chr3L	19136323	19136372	Stalker4	402	6981	7	49	'6-1	61.95	1.5	2.8	intron	CG14082 -	chr3L_7_19135001	chr3L_19135001	0.86	RAL-129
233	chr3L	19437153	19437174	jockey	12	34	4	21	'2-2	62.78	2.7	1.1	intergenic	not near genes	chr3L_4_19435001	chr3L_19435001	0.50	RAL-129
234	chr3L	19784245	19784294	Juan	2	4198	7	49	'4-3	63.19	2.7	1.9	intron,intron	CG42637 -,Gyc76C -	chr3L_7_19780001	chr3L_19780001	0.57	RAL-129
235	chr3L	19811957	19812016	hobo	6	2926	7	59	'5-2	64.37	3.1	1.7	intron	Cyp305a1 -	chr3L_7_19810001	chr3L_19810001	0.71	RAL-129
236	chr3L	19951201	19951261	Ivk	6	5372	6	60	'4-2	61.33	1.3	2.6	intron	Ac76E +	chr3L_6_19950001	chr3L_19950001	0.67	RAL-129
237	chr3L	20001570	20001644	P-element	2885	2886	15	74	'8-7	54.14	4.6	2.7	intron	Tom20 +	chr3L_15_20000001	chr3L_20000001	0.53	RAL-129
238	chr3L	20059800	20059863	hobo	10	2934	8	63	'6-2	64.68	3.8	1.7	3` UTR	sNPF-R -	chr3L_8_20055001	chr3L_20055001	0.75	RAL-129
239	chr3L	20171946	20172026	flea	250	4753	9	80	'3-6	72.91	3.3	2.1	intron	CG42674 -	chr3L_9_20170001	chr3L_20170001	0.33	RAL-129
240	chr3L	20288617	20288655	hopper	1399	26	4	38	'3-1	61.79	5.9	0.6	intron	gogo -	chr3L_4_20285001	chr3L_20285001	0.75	RAL-129
241	chr3L	20361693	20361767	pogo	2095	4	9	74	'6-3	65.61	1.5	3.6	intergenic	DNApol-alpha60 -,Toll-9 -	chr3L_9_20360001	chr3L_20360001	0.67	RAL-129
242	chr3L	20497316	20497386	P-element	6	2886	13	70	'5-8	50.91	3.2	3.1	intergenic	CG32425 +,CG6020 +	chr3L_13_20495001	chr3L_20495001	0.38	RAL-129
243	chr3L	21164412	21164440	jockey	4700	4673	5	28	'4-1	64.33	2.1	1.6	intron	Ac78C -	chr3L_5_21160001	chr3L_21160001	0.80	RAL-129
244	chr3L	21326535	21326588	1360	3374	3380	8	53	'2-6	68.83	3.4	1.8	intron	Rab26 +	chr3L_8_21325001	chr3L_21325001	0.25	RAL-129
245	chr3L	21776820	21776835	X-element	4707	4690	4	15	'1-3	66.86	0.8	2.2	intron,intron	CG42689 +,CG42552 +	chr3L_4_21775001	chr3L_21775001	0.25	RAL-129
246	chr3L	22190015	22190089	blood	5	377	15	74	'5-10	66.42	3.4	3.4	intron	olf413 +	chr3L_15_22190001	chr3L_22190001	0.33	RAL-129
247	chr3L	22613431	22613468	hopper	12	29	8	37	'5-3	63.87	2.2	2.5	intron	CG14459 -	chr3L_8_22610001	chr3L_22610001	0.62	RAL-129
248	chr3L	22787637	22787693	copia	250	4873	6	56	'3-3	67.27	4.7	1.1	intergenic	SPoCk +	chr3L_6_22785001	chr3L_22785001	0.50	RAL-129
249	chr3L	22917407	22917461	jockey	4978	4863	5	54	'4-1	65.01	3.9	1.0	intron	CG12768 +	chr3L_5_22915001	chr3L_22915001	0.80	RAL-129
250	chr3L	24034675	24034703	1360	279	251	5	28	'2-3	64.53	0.3	3.8	intron	CG40045 +	chr3L_5_24030001	chr3L_24030001	0.40	RAL-129
251	chr3L	24059296	24059311	HMS-Beagle	235	243	6	15	'5-1	58.47	2.4	1.8	intergenic	not near genes	chr3L_6_24055001	chr3L_24055001	0.83	RAL-129
252	chr3L	25272542	25272566	1360	6	9	8	24	'3-5	63.76	2.6	2.2	intron	CG40467 -	chr3L_8_25270001	chr3L_25270001	0.38	RAL-129
253	chr3L	27415235	27415295	transib2	2813	2	5	60	'2-3	59.53	1.8	1.8	intron	Dbp80 +	chr3L_5_27415001	chr3L_27415001	0.40	RAL-129
254	chr3R	723155	723184	gypsy6	64	7472	5	29	'2-3	62.19	2.3	1.5	intergenic	not near genes	chr3R_5_720001	chr3R_720001	0.40	RAL-129
255	chr3R	3280802	3280828	Burdock	244	257	6	26	'4-2	71.19	2.1	1.9	intergenic	not near genes	chr3R_6_3280001	chr3R_3280001	0.67	RAL-129
256	chr3R	4167990	4168041	1360	3381	3	5	51	'1-4	66.67	2.2	1.6	intergenic	not near genes	chr3R_5_4165001	chr3R_4165001	0.20	RAL-129
257	chr3R	5264471	5264528	P-element	2880	14	10	57	'5-5	47.30	2.6	2.8	intron	Hph +	chr3R_10_5260001	chr3R_5260001	0.50	RAL-129
258	chr3R	5336912	5336968	hobo	19	2936	6	56	'5-1	61.81	1.9	2.1	intron	mtd -	chr3R_6_5335001	chr3R_5335001	0.83	RAL-129
259	chr3R	5455151	5455196	mdg1	390	3	6	45	'1-5	63.20	2.6	1.7	intron	CG14669 +	chr3R_6_5455001	chr3R_5455001	0.17	RAL-129
260	chr3R	5733196	5733238	jockey	4778	4987	6	42	'5-1	65.47	0.7	3.5	intergenic	CG1239 +	chr3R_6_5730001	chr3R_5730001	0.83	RAL-129
261	chr3R	5784783	5784810	blood	7008	7044	6	27	'4-2	66.59	3.9	1.2	intron	kat-60L1 +	chr3R_6_5780001	chr3R_5780001	0.67	RAL-129
262	chr3R	5806053	5806115	mdg3	5273	251	9	62	'4-5	65.03	3.2	2.1	intron	CG11000 +	chr3R_9_5805001	chr3R_5805001	0.44	RAL-129
263	chr3R	5926316	5926373	I-element	8	5347	8	57	'5-3	61.32	4.5	1.5	intron	CG34113 -	chr3R_8_5925001	chr3R_5925001	0.62	RAL-129
264	chr3R	6003344	6003416	Tirant	8111	8498	9	72	'5-4	64.40	3.2	2.1	intron	Rm62 -	chr3R_9_6000001	chr3R_6000001	0.56	RAL-129
265	chr3R	6121168	6121385	copia	247	20	8	217	'4-4	68.61	0.4	5.7	intergenic	not near genes	chr3R_8_6120001	chr3R_6120001	0.50	RAL-129
266	chr3R	6405091	6405120	297	6947	395	9	29	'5-4	63.11	2.3	2.7	intron	Dmtn -	chr3R_9_6405001	chr3R_6405001	0.56	RAL-129
267	chr3R	6552042	6552106	mdg1	13	7456	5	64	'3-2	67.82	2.1	1.6	intron	dpr11 -	chr3R_5_6550001	chr3R_6550001	0.60	RAL-129
268	chr3R	6694202	6694261	pogo	16	2092	7	59	'3-4	64.32	2.7	1.9	intergenic	not near genes	chr3R_7_6690001	chr3R_6690001	0.43	RAL-129
269	chr3R	6813655	6813726	copia	4878	255	11	71	'5-6	65.00	2.9	2.8	intron	CR42651 -	chr3R_11_6810001	chr3R_6810001	0.45	RAL-129
270	chr3R	6831692	6831742	roo	9043	8666	7	50	'3-4	67.72	1.0	3.5	intron	Scr -	chr3R_7_6830001	chr3R_6830001	0.43	RAL-129
271	chr3R	6859509	6859527	F-element	302	320	5	18	'2-3	61.44	7.0	0.6	intergenic	not near genes	chr3R_5_6855001	chr3R_6855001	0.40	RAL-129
272	chr3R	7100990	7101049	pogo	2096	18	4	59	'2-2	68.23	1.6	1.5	intron	Alh -	chr3R_4_7100001	chr3R_7100001	0.50	RAL-129
273	chr3R	7362412	7362473	hobo	1	2935	6	61	'5-1	68.21	3.0	1.5	intergenic	CG17944 -	chr3R_6_7360001	chr3R_7360001	0.83	RAL-129
274	chr3R	7492407	7492475	1360	3383	3385	7	68	'4-3	66.41	2.8	1.8	intron	alpha-Est10 -	chr3R_7_7490001	chr3R_7490001	0.57	RAL-129
275	chr3R	7655883	7655960	roo	8661	403	11	77	'4-7	61.70	1.6	4.2	intergenic	not near genes	chr3R_11_7655001	chr3R_7655001	0.36	RAL-129
276	chr3R	7886171	7886204	jockey	4954	4987	8	33	'3-5	67.77	4.6	1.4	intron	CG17816 -	chr3R_8_7885001	chr3R_7885001	0.38	RAL-129
277	chr3R	8069189	8069259	mdg1	7045	418	10	70	'5-5	64.47	2.9	2.6	intron	mAChR-B +	chr3R_10_8065001	chr3R_8065001	0.50	RAL-129
278	chr3R	8344391	8344458	P-element	2882	5	15	67	'8-7	48.11	3.2	3.6	intergenic	DppIII +,CG18193 +	chr3R_15_8340001	chr3R_8340001	0.53	RAL-129
279	chr3R	8760071	8760116	roo	18	391	4	45	'3-1	68.00	2.0	1.3	intron,intron	CG11768 -,CG34135 -	chr3R_4_8760001	chr3R_8760001	0.75	RAL-129
280	chr3R	8811168	8811245	1360	1	1	11	77	'6-5	64.52	2.9	2.8	intron	CG9837 -	chr3R_11_8810001	chr3R_8810001	0.55	RAL-129
281	chr3R	9106182	9106254	1360	2	2	8	72	'5-3	61.92	3.8	1.7	intron	pum -	chr3R_8_9105001	chr3R_9105001	0.62	RAL-129
282	chr3R	9192508	9192590	invader3	5184	5463	9	82	'3-6	63.43	2.4	2.6	intron	pum -	chr3R_9_9190001	chr3R_9190001	0.33	RAL-129
283	chr3R	10713800	10713818	G2	2761	2776	6	18	'4-2	59.24	5.1	1.0	intergenic	not near genes	chr3R_6_10710001	chr3R_10710001	0.67	RAL-129
284	chr3R	10778972	10779045	Bari1	9	1706	12	73	'7-5	68.11	3.0	3.0	intergenic	not near genes	chr3R_12_10775001	chr3R_10775001	0.58	RAL-129
285	chr3R	10941401	10941472	roo	2	408	11	71	'7-4	64.55	2.2	3.4	intergenic	not near genes	chr3R_11_10940001	chr3R_10940001	0.64	RAL-129
286	chr3R	10973446	10973496	hobo	6	2920	8	50	'6-2	57.77	4.3	1.5	intron	CG34114 +	chr3R_8_10970001	chr3R_10970001	0.75	RAL-129
287	chr3R	11102995	11103015	roo	407	9050	6	20	'2-4	65.03	4.5	1.1	intergenic	not near genes	chr3R_6_11100001	chr3R_11100001	0.33	RAL-129
288	chr3R	11163026	11163095	mdg1	7458	11	9	69	'6-3	65.59	2.1	2.9	exon	CG4757 +	chr3R_9_11160001	chr3R_11160001	0.67	RAL-129
289	chr3R	11526778	11526857	pogo	2099	1	8	79	'1-7	66.88	1.6	3.1	intergenic	not near genes	chr3R_8_11525001	chr3R_11525001	0.12	RAL-129
290	chr3R	11553660	11553724	hopper	7	1412	8	64	'2-6	61.45	3.8	1.7	intergenic	CG14708 +	chr3R_8_11550001	chr3R_11550001	0.25	RAL-129
291	chr3R	12166420	12166477	hobo	2923	4	12	57	'3-9	62.18	2.6	3.3	intergenic	Cpn -	chr3R_12_12165001	chr3R_12165001	0.25	RAL-129
292	chr3R	12331706	12331767	roo	17	407	11	61	'5-6	63.48	1.4	4.6	intergenic	not near genes	chr3R_11_12330001	chr3R_12330001	0.45	RAL-129
293	chr3R	12622377	12622421	roo	9043	8672	7	44	'1-6	66.28	0.9	3.7	intergenic	not near genes	chr3R_7_12620001	chr3R_12620001	0.14	RAL-129
294	chr3R	13201058	13201117	hobo	2927	5	8	59	'2-6	62.21	4.4	1.5	intergenic	not near genes	chr3R_8_13200001	chr3R_13200001	0.25	RAL-129
295	chr3R	13225498	13225554	hobo	6	2934	8	56	'4-4	58.04	3.0	2.0	intron	Ace -	chr3R_8_13225001	chr3R_13225001	0.50	RAL-129
296	chr3R	13349483	13349571	Ivk	5235	3	10	88	'4-6	61.08	0.5	6.7	intergenic	not near genes	chr3R_10_13345001	chr3R_13345001	0.40	RAL-129
297	chr3R	13437176	13437224	hopper	21	1404	6	48	'1-5	64.12	1.9	2.1	intergenic	not near genes	chr3R_6_13435001	chr3R_13435001	0.17	RAL-129
298	chr3R	13888152	13888230	blood	7384	7008	15	78	'5-10	65.46	4.0	3.0	intergenic	not near genes	chr3R_15_13885001	chr3R_13885001	0.33	RAL-129
299	chr3R	14138631	14138701	roo	6	407	10	70	'5-5	70.33	3.2	2.4	intergenic	not near genes	chr3R_10_14135001	chr3R_14135001	0.50	RAL-129
300	chr3R	14245019	14245084	412	7534	3	6	65	'5-1	61.69	1.7	2.2	intron	CG9616 -	chr3R_6_14245001	chr3R_14245001	0.83	RAL-129
301	chr3R	14614343	14614423	roo	8666	410	14	80	'5-9	67.93	1.6	5.4	intron	CG14853 +	chr3R_14_14610001	chr3R_14610001	0.36	RAL-129
302	chr3R	14745351	14745427	roo	407	2	12	76	'6-6	67.24	2.1	3.9	intron	jvl +	chr3R_12_14745001	chr3R_14745001	0.50	RAL-129
303	chr3R	14962384	14962460	mdg1	7457	3	9	76	'5-4	65.28	1.8	3.2	intergenic	not near genes	chr3R_9_14960001	chr3R_14960001	0.56	RAL-129
304	chr3R	14971387	14971456	hopper	6	6	11	69	'6-5	65.71	4.2	2.1	intergenic	not near genes	chr3R_11_14970001	chr3R_14970001	0.55	RAL-129
305	chr3R	15185051	15185069	hobo	12	32	5	18	'2-3	67.44	4.4	0.9	intron	Gyc88E +	chr3R_5_15185001	chr3R_15185001	0.40	RAL-129
306	chr3R	15754767	15754843	hobo	2709	4	13	76	'8-5	63.28	5.2	2.1	intergenic	not near genes	chr3R_13_15750001	chr3R_15750001	0.62	RAL-129
307	chr3R	16798746	16798793	jockey	4668	4987	4	47	'3-1	52.83	2.8	1.1	intergenic	not near genes	chr3R_4_16795001	chr3R_16795001	0.75	RAL-129
308	chr3R	17335917	17335969	hopper	18	1412	7	52	'5-2	61.28	2.0	2.3	intron	beat-IIa -	chr3R_7_17335001	chr3R_17335001	0.71	RAL-129
309	chr3R	17461537	17461605	roo	1	9067	10	68	'7-3	58.95	3.3	2.3	intergenic	not near genes	chr3R_10_17460001	chr3R_17460001	0.70	RAL-129
310	chr3R	17530424	17530487	hopper	229	1413	10	63	'3-7	63.90	0.3	7.7	intergenic	not near genes	chr3R_10_17530001	chr3R_17530001	0.30	RAL-129
311	chr3R	17583292	17583360	roo	8674	410	12	68	'5-7	68.38	0.5	8.0	intergenic	not near genes	chr3R_12_17580001	chr3R_17580001	0.42	RAL-129
312	chr3R	17667804	17667862	412	480	7	9	58	'5-4	62.16	2.4	2.6	intron,5` UTR	CG14322 +,CR45045 +	chr3R_9_17665001	chr3R_17665001	0.56	RAL-129
313	chr3R	17679865	17679934	P-element	2	2885	9	69	'4-5	55.77	2.4	2.6	intron	alt -	chr3R_9_17675001	chr3R_17675001	0.44	RAL-129
314	chr3R	17733255	17733285	INE-1	566	561	5	30	'2-3	67.69	3.1	1.2	intergenic	Lgr1 +,CG14321 +	chr3R_5_17730001	chr3R_17730001	0.40	RAL-129
315	chr3R	18045394	18045585	diver	5701	12	22	191	'5-17	60.73	1.4	9.2	3` UTR	htl -	chr3R_22_18045001	chr3R_18045001	0.23	RAL-129
316	chr3R	18202339	18202361	jockey	4785	4762	6	22	'3-3	60.72	2.3	1.8	intron	CG7985 +	chr3R_6_18200001	chr3R_18200001	0.50	RAL-129
317	chr3R	18337169	18337214	roo	389	14	7	45	'2-5	66.47	2.6	1.9	intron	CG15803 -	chr3R_7_18335001	chr3R_18335001	0.29	RAL-129
318	chr3R	18923860	18923930	P-element	2884	2882	9	70	'5-4	55.91	3.1	2.2	intron	Xrp1 +	chr3R_9_18920001	chr3R_18920001	0.56	RAL-129
319	chr3R	19122573	19122653	mdg3	5497	5252	11	80	'4-7	67.46	2.5	3.1	intron	CG6040 +	chr3R_11_19120001	chr3R_19120001	0.36	RAL-129
320	chr3R	19589927	19589947	BS	4998	5003	6	20	'2-4	56.83	2.1	1.9	intron	Dys +	chr3R_6_19585001	chr3R_19585001	0.33	RAL-129
321	chr3R	20273788	20273860	297	6591	394	7	72	'2-5	68.72	2.5	2.0	intron	cic +	chr3R_7_20270001	chr3R_20270001	0.29	RAL-129
322	chr3R	20419182	20419250	3S18	327	5764	8	68	'1-7	59.71	2.3	2.4	intron	Gfrl -	chr3R_8_20415001	chr3R_20415001	0.12	RAL-129
323	chr3R	20685479	20685498	blood	7014	7035	7	19	'4-3	62.59	3.6	1.5	intergenic	not near genes	chr3R_7_20685001	chr3R_20685001	0.57	RAL-129
324	chr3R	20685843	20685919	Stalker4	409	4	7	76	'4-3	59.19	1.8	2.5	intergenic	not near genes	chr3R_7_20685001	chr3R_20685001	0.57	RAL-129
325	chr3R	20783970	20783986	hopper	1399	1383	4	16	'2-2	64.00	3.8	0.8	intron	Syp +	chr3R_4_20780001	chr3R_20780001	0.50	RAL-129
326	chr3R	20791062	20791132	pogo	2089	14	9	70	'4-5	65.01	2.6	2.5	intron	Syp +	chr3R_9_20790001	chr3R_20790001	0.44	RAL-129
327	chr3R	20936305	20936372	opus	11	7497	12	67	'7-5	66.74	2.7	3.2	intron	CG31191 -	chr3R_12_20935001	chr3R_20935001	0.58	RAL-129
328	chr3R	21114380	21114443	roo	397	4	8	63	'6-2	69.84	2.4	2.4	intron	Rab11 +	chr3R_8_21110001	chr3R_21110001	0.75	RAL-129
329	chr3R	21157628	21157879	FB	26	15	7	251	'1-6	59.25	2.6	1.9	intron	SNF4Agamma +	chr3R_7_21155001	chr3R_21155001	0.14	RAL-129
330	chr3R	21259911	21259953	I-element	5336	10	5	42	'4-1	68.27	1.2	2.3	intron	ETHR +	chr3R_5_21255001	chr3R_21255001	0.80	RAL-129
331	chr3R	21265622	21265638	Ivk	5345	5361	5	16	'2-3	66.82	2.3	1.5	intergenic	Rab1 -,ETHR +	chr3R_5_21265001	chr3R_21265001	0.40	RAL-129
332	chr3R	21676254	21676333	412	4	495	7	79	'2-5	65.13	1.2	3.2	intron	CG31176 -	chr3R_7_21675001	chr3R_21675001	0.29	RAL-129
333	chr3R	21741025	21741099	opus	490	112	7	74	'4-3	65.36	2.6	1.9	intron	CG5849 +	chr3R_7_21740001	chr3R_21740001	0.57	RAL-129
334	chr3R	21993215	21993242	jockey	4986	4959	5	27	'3-2	68.19	3.3	1.2	intron	Eip93F +	chr3R_5_21990001	chr3R_21990001	0.60	RAL-129
335	chr3R	22979350	22979400	Juan	4084	4205	8	50	'6-2	59.84	2.7	2.2	intergenic	not near genes	chr3R_8_22975001	chr3R_22975001	0.75	RAL-129
336	chr3R	23591430	23591551	pogo	19	1949	6	121	'5-1	66.28	1.5	2.4	exon	CG33337 -	chr3R_6_23590001	chr3R_23590001	0.83	RAL-129
337	chr3R	23669187	23669229	hobo	2923	19	5	42	'3-2	60.18	2.3	1.5	intron	CG31145 -	chr3R_5_23665001	chr3R_23665001	0.60	RAL-129
338	chr3R	23744088	23744156	roo	408	8675	8	68	'3-5	72.92	2.0	2.7	intron	Hmgcr +	chr3R_8_23740001	chr3R_23740001	0.38	RAL-129
339	chr3R	23968603	23968636	jockey	16	7	5	33	'2-3	60.43	2.9	1.3	intron	CG31140 +	chr3R_5_23965001	chr3R_23965001	0.40	RAL-129
340	chr3R	24415393	24415410	flea	256	4998	6	17	'2-4	57.59	6.4	0.8	intron	nAChRalpha1 -	chr3R_6_24415001	chr3R_24415001	0.33	RAL-129
341	chr3R	25121195	25121281	pogo	2098	8	6	86	'1-5	62.67	1.1	2.9	intron,intron	CG31108 -,CG31510 -	chr3R_6_25120001	chr3R_25120001	0.17	RAL-129
342	chr3R	25390595	25390676	Transpac	4919	311	17	81	'8-9	66.45	1.9	5.9	intron	Fur1 -	chr3R_17_25390001	chr3R_25390001	0.47	RAL-129
343	chr3R	25534083	25534146	hobo	2935	5	10	63	'2-8	61.53	2.4	2.9	intron	msi +	chr3R_10_25530001	chr3R_25530001	0.20	RAL-129
344	chr3R	25570597	25570621	jockey	8	32	8	24	'2-6	62.22	3.8	1.7	intron	msi +	chr3R_8_25570001	chr3R_25570001	0.25	RAL-129
345	chr3R	25819183	25819236	Transpac	26	308	6	53	'2-4	72.21	1.8	2.1	intergenic	not near genes	chr3R_6_25815001	chr3R_25815001	0.33	RAL-129
346	chr3R	26029518	26029574	hopper	1412	21	10	56	'5-5	64.02	3.6	2.2	exon	E(spl)m5-HLH -	chr3R_10_26025001	chr3R_26025001	0.50	RAL-129
347	chr3R	26352927	26352982	I-element	5347	8	5	55	'3-2	62.67	1.5	2.0	intron	CG33970 +	chr3R_5_26350001	chr3R_26350001	0.60	RAL-129
348	chr3R	26465456	26465529	412	3	7541	12	73	'8-4	65.20	3.0	3.0	intron	CG5455 +	chr3R_12_26465001	chr3R_26465001	0.67	RAL-129
349	chr3R	27328122	27328191	hobo	2	2709	4	69	'3-1	65.06	2.1	1.3	intergenic	not near genes	chr3R_4_27325001	chr3R_27325001	0.75	RAL-129
350	chr3R	28774617	28774685	roo	406	8667	11	68	'6-5	67.63	3.0	2.8	intergenic	not near genes	chr3R_11_28770001	chr3R_28770001	0.55	RAL-129
351	chr3R	28938146	28938171	412	25	481	5	25	'4-1	71.98	1.9	1.7	intron	CG14521 -	chr3R_5_28935001	chr3R_28935001	0.80	RAL-129
352	chr3R	28953464	28953538	flea	251	4760	9	74	'3-6	68.71	2.2	2.8	intron	CG14521 -	chr3R_9_28950001	chr3R_28950001	0.33	RAL-129
353	chr3R	28999256	28999323	Burdock	6376	6136	6	67	'4-2	65.44	0.7	3.5	intron	wat -	chr3R_6_28995001	chr3R_28995001	0.67	RAL-129
354	chr3R	29769898	29769971	roo	403	2	7	73	'3-4	67.40	3.1	1.7	intron	kay +	chr3R_7_29765001	chr3R_29765001	0.43	RAL-129
355	chr3R	31480004	31480052	roo	9042	4	6	48	'3-3	70.64	1.5	2.4	intergenic	not near genes	chr3R_6_31480001	chr3R_31480001	0.50	RAL-129
356	chr3R	31605449	31605502	Tirant	8117	383	13	53	'6-7	64.42	2.2	4.1	intron	CycG -	chr3R_13_31605001	chr3R_31605001	0.46	RAL-129
357	chr4	311208	311591	1360	3388	3388	8	383	'4-4	67.47	0.4	5.7	3` UTR	Zip102B -	chr4_8_310001	chr4_310001	0.50	RAL-129
358	chr4	1179516	1179600	opus	110	497	8	84	'3-5	67.36	2.7	2.2	intron	pho -	chr4_8_1175001	chr4_1175001	0.38	RAL-129
359	chrX	265605	265677	HMS-Beagle	238	6798	7	72	'3-4	68.00	1.7	2.6	intron	CR43906 +	chrX_7_265001	chrX_265001	0.43	RAL-129
360	chrX	537516	537578	hopper	3	1411	10	62	'5-5	66.38	1.4	4.2	intron	Appl +	chrX_10_535001	chrX_535001	0.50	RAL-129
361	chrX	684728	684753	1360	1	3374	4	25	'2-2	68.12	3.1	1.0	intergenic	not near genes	chrX_4_680001	chrX_680001	0.50	RAL-129
362	chrX	711737	711809	297	6581	387	5	72	'4-1	59.77	1.1	2.4	intron	sdk +	chrX_5_710001	chrX_710001	0.80	RAL-129
363	chrX	900075	900133	hopper	14	1407	10	58	'6-4	64.97	2.2	3.1	intron	CG43867 -	chrX_10_900001	chrX_900001	0.60	RAL-129
364	chrX	2636039	2636057	P-element	2882	2867	4	18	'1-3	50.26	2.2	1.2	intron	sgg +	chrX_4_2635001	chrX_2635001	0.25	RAL-129
365	chrX	2779320	2779397	Tirant	392	8107	13	77	'7-6	64.60	0.9	6.8	intron	kirre +	chrX_13_2775001	chrX_2775001	0.54	RAL-129
366	chrX	3692249	3692288	FB	10	7	5	39	'3-2	60.11	3.9	1.0	intron	Mnt +	chrX_5_3690001	chrX_3690001	0.60	RAL-129
367	chrX	4214617	4214671	hobo	2931	16	5	54	'2-3	64.01	1.9	1.7	intergenic	not near genes	chrX_5_4210001	chrX_4210001	0.40	RAL-129
368	chrX	4292447	4292520	hopper	1408	1	5	73	'1-4	62.90	2.0	1.7	intergenic	not near genes	chrX_5_4290001	chrX_4290001	0.20	RAL-129
369	chrX	4703118	4703139	S-element	2	1697	4	21	'1-3	66.77	5.5	0.6	intron	l(1)G0334 +	chrX_4_4700001	chrX_4700001	0.25	RAL-129
370	chrX	4813528	4813597	Tirant	5	403	12	69	'6-6	61.68	4.6	2.1	intergenic	not near genes	chrX_12_4810001	chrX_4810001	0.50	RAL-129
371	chrX	5513357	5513387	jockey	4718	4688	6	30	'4-2	64.63	2.5	1.7	intergenic	not near genes	chrX_6_5510001	chrX_5510001	0.67	RAL-129
372	chrX	5638864	5638920	P-element	17	3	12	56	'7-5	47.46	3.0	3.0	intron	CG42492 -	chrX_12_5635001	chrX_5635001	0.58	RAL-129
373	chrX	6463038	6463090	blood	360	6	7	52	'4-3	67.46	2.4	2.1	intron	CG42340 -	chrX_7_6460001	chrX_6460001	0.57	RAL-129
374	chrX	6520385	6520461	roo	404	8664	7	76	'4-3	66.30	1.4	2.9	intron	CG42340 -	chrX_7_6520001	chrX_6520001	0.57	RAL-129
375	chrX	6704983	6705050	Burdock	242	6135	5	67	'2-3	66.30	2.5	1.4	intron	CG14441 +	chrX_5_6700001	chrX_6700001	0.40	RAL-129
376	chrX	7256356	7256436	412	9	498	7	80	'5-2	64.15	0.7	4.1	intron	CR44357 -	chrX_7_7255001	chrX_7255001	0.71	RAL-129
377	chrX	7754503	7754535	hobo	13	2912	7	32	'6-1	64.93	1.9	2.4	intergenic	not near genes	chrX_7_7750001	chrX_7750001	0.86	RAL-129
378	chrX	7954301	7954317	P-element	33	2861	4	16	'1-3	34.89	5.4	0.6	exon	CG15332 -	chrX_4_7950001	chrX_7950001	0.25	RAL-129
379	chrX	7995411	7995438	P-element	2885	2859	4	27	'2-2	53.10	4.8	0.7	intergenic	Tbh +	chrX_4_7995001	chrX_7995001	0.50	RAL-129
380	chrX	8038768	8038793	297	6604	6580	6	25	'2-4	68.38	2.2	1.9	3` UTR	fs(1)h -	chrX_6_8035001	chrX_8035001	0.33	RAL-129
381	chrX	8378633	8378687	412	7545	6	7	54	'4-3	62.09	3.7	1.5	intergenic	not near genes	chrX_7_8375001	chrX_8375001	0.57	RAL-129
382	chrX	8398005	8398025	opus	494	474	4	20	'2-2	67.88	4.2	0.8	5` UTR	CG15345 -	chrX_4_8395001	chrX_8395001	0.50	RAL-129
383	chrX	8670751	8670819	pogo	2099	16	7	68	'6-1	67.76	2.5	2.0	intergenic	not near genes	chrX_7_8670001	chrX_8670001	0.86	RAL-129
384	chrX	8894230	8894254	P-element	32	2879	4	24	'3-1	42.29	1.3	1.7	intron	Moe -	chrX_4_8890001	chrX_8890001	0.75	RAL-129
385	chrX	9048602	9048664	copia	4873	241	6	62	'3-3	66.25	1.8	2.1	3` UTR,intron	CR43836 -,CG42388 +	chrX_6_9045001	chrX_9045001	0.50	RAL-129
386	chrX	10112917	10112947	FB	1	29	4	30	'2-2	67.23	2.0	1.3	intron	RhoU +	chrX_4_10110001	chrX_10110001	0.50	RAL-129
387	chrX	10368031	10368062	P-element	13	8	7	31	'3-4	43.00	3.9	1.4	intergenic	CG17841 +	chrX_7_10365001	chrX_10365001	0.43	RAL-129
388	chrX	10741652	10741716	P-element	9	5	11	64	'3-8	48.77	2.4	3.2	intron	CG32676 -	chrX_11_10740001	chrX_10740001	0.27	RAL-129
389	chrX	10836747	10836782	blood	417	445	10	35	'7-3	62.76	8.5	1.1	exon	sbr -	chrX_10_10835001	chrX_10835001	0.70	RAL-129
390	chrX	11221717	11221747	pogo	27	2074	4	30	'1-3	78.38	0.6	2.5	intergenic	not near genes	chrX_4_11220001	chrX_11220001	0.25	RAL-129
391	chrX	11262176	11262253	3S18	5769	341	9	77	'5-4	65.57	1.8	3.2	intron	CG44422 -	chrX_9_11260001	chrX_11260001	0.56	RAL-129
392	chrX	11463638	11463692	pogo	2089	17	6	54	'1-5	69.84	1.8	2.1	intron	CG43155 +	chrX_6_11460001	chrX_11460001	0.17	RAL-129
393	chrX	12698706	12698776	1360	2	3387	12	70	'7-5	68.96	2.9	3.1	intron	Smr -	chrX_12_12695001	chrX_12695001	0.58	RAL-129
394	chrX	12752127	12752193	P-element	2879	2883	5	66	'4-1	51.56	3.0	1.2	5` UTR	CR44619 +	chrX_5_12750001	chrX_12750001	0.80	RAL-129
395	chrX	12809582	12809642	roo	8670	394	6	60	'4-2	67.55	0.7	3.5	intron	Pde9 -	chrX_6_12805001	chrX_12805001	0.67	RAL-129
396	chrX	12991445	12991478	412	7520	7070	4	33	'1-3	62.95	1.1	1.9	intron	rad +	chrX_4_12990001	chrX_12990001	0.25	RAL-129
397	chrX	13383912	13383973	Tirant	8133	403	9	61	'2-7	70.46	2.3	2.7	intron	Rbp1-like -	chrX_9_13380001	chrX_13380001	0.22	RAL-129
398	chrX	13989024	13989054	P-element	2852	2882	4	30	'2-2	45.11	1.7	1.5	intergenic	not near genes	chrX_4_13985001	chrX_13985001	0.50	RAL-129
399	chrX	14184022	14184076	rover	348	6977	7	54	'3-4	72.69	0.8	3.9	intergenic	not near genes	chrX_7_14180001	chrX_14180001	0.43	RAL-129
400	chrX	14452187	14452259	roo	8670	409	4	72	'1-3	57.79	0.8	2.2	intron	dpr8 +	chrX_4_14450001	chrX_14450001	0.25	RAL-129
401	chrX	14826043	14826084	P-element	2883	16	7	41	'2-5	46.68	3.0	1.8	5` UTR	rut -	chrX_7_14825001	chrX_14825001	0.29	RAL-129
402	chrX	14858536	14858613	roo	8664	410	7	77	'4-3	63.76	1.8	2.5	intron	Flo2 +	chrX_7_14855001	chrX_14855001	0.57	RAL-129
403	chrX	14903431	14903487	P-element	11	9	6	56	'4-2	50.67	1.3	2.6	intron,intron	Flo2 +,CG9512 -	chrX_6_14900001	chrX_14900001	0.67	RAL-129
404	chrX	15076204	15076272	P-element	2883	2884	6	68	'4-2	48.98	4.3	1.1	5` UTR	Lsd-2 -	chrX_6_15075001	chrX_15075001	0.67	RAL-129
405	chrX	15218447	15218504	roo	9053	6	5	57	'2-3	62.02	3.0	1.2	intergenic	not near genes	chrX_5_15215001	chrX_15215001	0.40	RAL-129
406	chrX	15412938	15413011	hopper	5	1414	4	73	'3-1	69.09	2.3	1.2	intron	Cngl -	chrX_4_15410001	chrX_15410001	0.75	RAL-129
407	chrX	15500232	15500306	mdg3	5497	5252	9	74	'4-5	65.14	2.0	3.0	intron	Gmap +	chrX_9_15500001	chrX_15500001	0.44	RAL-129
408	chrX	15683791	15683814	I-element	4	26	9	23	'5-4	61.25	4.6	1.6	intergenic	not near genes	chrX_9_15680001	chrX_15680001	0.56	RAL-129
409	chrX	16373434	16373474	P-element	2863	12	6	40	'1-5	52.38	1.2	2.7	intron	Fur2 +	chrX_6_16370001	chrX_16370001	0.17	RAL-129
410	chrX	17099124	17099179	opus	7478	112	4	55	'3-1	75.59	0.8	2.2	intron	CG4991 +	chrX_4_17095001	chrX_17095001	0.75	RAL-129
411	chrX	17470987	17471047	opus	111	7486	8	60	'3-5	68.31	2.9	2.1	intron	CG43658 -	chrX_8_17470001	chrX_17470001	0.38	RAL-129
412	chrX	17715407	17715477	mdg3	5252	234	5	70	'2-3	57.32	1.9	1.7	intron	CG42684 +	chrX_5_17715001	chrX_17715001	0.40	RAL-129
413	chrX	18009150	18009169	jockey	4768	4786	4	19	'2-2	63.24	2.1	1.3	intron	Sh -	chrX_4_18005001	chrX_18005001	0.50	RAL-129
414	chrX	18091019	18091039	F-element	114	122	4	20	'3-1	59.43	2.1	1.3	intergenic	scu +	chrX_4_18090001	chrX_18090001	0.75	RAL-129
415	chrX	18193724	18193778	hopper	1413	22	5	54	'3-2	71.22	2.1	1.6	intron	Frq2 +	chrX_5_18190001	chrX_18190001	0.60	RAL-129
416	chrX	18239061	18239085	jockey	4556	4580	4	24	'3-1	64.56	2.6	1.1	intergenic	not near genes	chrX_4_18235001	chrX_18235001	0.75	RAL-129
417	chrX	18409508	18409543	jockey	6	17	6	35	'3-3	64.37	2.6	1.7	intron	CG32549 -	chrX_6_18405001	chrX_18405001	0.50	RAL-129
418	chrX	19310582	19310646	pogo	2085	2	4	64	'2-2	65.95	1.0	2.0	3` UTR	out -	chrX_4_19310001	chrX_19310001	0.50	RAL-129
419	chrX	19745687	19745715	Max-element	314	285	5	28	'3-2	66.96	7.1	0.6	3` UTR,3` UTR	CG33932 +,Rpp20 +	chrX_5_19745001	chrX_19745001	0.60	RAL-129
420	chrX	19807159	19807231	412	6	492	5	72	'1-4	66.50	1.4	2.1	intergenic	not near genes	chrX_5_19805001	chrX_19805001	0.20	RAL-129
421	chrX	20106330	20106354	hopper	7	1384	5	24	'2-3	65.52	2.9	1.3	intergenic	not near genes	chrX_5_20105001	chrX_20105001	0.40	RAL-129
422	chrX	20236412	20236457	P-element	2883	12	6	45	'4-2	52.27	4.4	1.1	intergenic	sw -	chrX_6_20235001	chrX_20235001	0.67	RAL-129
423	chrX	21175373	21175393	Gypsy12A_LTR	2227	2240	5	20	'2-3	61.93	2.8	1.3	intergenic	not near genes	chrX_5_21175001	chrX_21175001	0.40	RAL-129
424	chrX	21667899	21667926	gypsy2	6524	6495	7	27	'5-2	66.94	4.8	1.2	intergenic	not near genes	chrX_7_21665001	chrX_21665001	0.71	RAL-129
425	chrX	21668323	21668402	roo	3	411	10	79	'5-5	71.69	1.8	3.6	intergenic	not near genes	chrX_10_21665001	chrX_21665001	0.50	RAL-129
426	chrX	21907792	21907809	ZAM	8178	220	5	17	'3-2	58.69	0.0	5.0	intergenic	not near genes	chrX_5_21905001	chrX_21905001	0.60	RAL-129
427	chrX	22916248	22916314	Transpac	4924	299	10	66	'4-6	62.67	1.3	4.3	intergenic	not near genes	chrX_10_22915001	chrX_22915001	0.40	RAL-129
428	chrY	424992	425014	HMS-Beagle	6804	6824	4	22	'2-2	65.47	2.3	1.2	intergenic	not near genes	chrY_4_420001	chrY_420001	0.50	RAL-129